pax_global_header00006660000000000000000000000064145637632650014533gustar00rootroot0000000000000052 comment=14f5ce43e46735b67d4a0b73bf6089f8cb0f0504 augur-24.2.2/000077500000000000000000000000001456376326500127455ustar00rootroot00000000000000augur-24.2.2/.coveragerc000066400000000000000000000010521456376326500150640ustar00rootroot00000000000000# .coveragerc to control coverage.py [run] branch = True [report] # Regexes for lines to exclude from consideration exclude_lines = # Have to re-enable the standard pragma pragma: no cover # Don't complain about missing debug-only code: def __repr__ if self\.debug # Don't complain if tests don't hit defensive assertion code: raise AssertionError raise NotImplementedError # Don't complain if non-runnable code isn't run: if 0: if __name__ == .__main__.: ignore_errors = True [html] directory = htmlcov augur-24.2.2/.cramrc000066400000000000000000000000441456376326500142130ustar00rootroot00000000000000[cram] shell = /bin/bash indent = 2 augur-24.2.2/.flake8000066400000000000000000000011611456376326500141170ustar00rootroot00000000000000# Right now we use Flake8 only for a few static checks focusing on runtime # safety and correctness. We don't use it for style checks. [flake8] select = # syntax errors E9, # all pyflakes correctness issues F, # This option requires flake8 >=3.6.0, but if the pin is defined in setup.py, a # proper Snakemake version can't be resolved. I'm not sure why, so I've left # flake8 unpinned with a note here describing why (on the off chance that an # incompatible version of flake8 is installed). extend-ignore = # allow f-strings without any placeholders F541, # allow unused variables F841, augur-24.2.2/.github/000077500000000000000000000000001456376326500143055ustar00rootroot00000000000000augur-24.2.2/.github/dependabot.yml000066400000000000000000000010401456376326500171300ustar00rootroot00000000000000# Dependabot configuration file # # # Each ecosystem is checked on a scheduled interval defined below. To trigger # a check manually, go to # # https://github.com/nextstrain/augur/network/updates # # and look for a "Check for updates" button. You may need to click around a # bit first. --- version: 2 updates: - package-ecosystem: "github-actions" directory: "/" schedule: interval: "weekly" augur-24.2.2/.github/pull_request_template.md000066400000000000000000000016541456376326500212540ustar00rootroot00000000000000## Description of proposed changes ## Related issue(s) ## Checklist - [ ] Checks pass - [ ] If making user-facing changes, add a message in [CHANGES.md](https://github.com/nextstrain/augur/blob/HEAD/CHANGES.md) summarizing the changes in this PR augur-24.2.2/.github/workflows/000077500000000000000000000000001456376326500163425ustar00rootroot00000000000000augur-24.2.2/.github/workflows/ci.yaml000066400000000000000000000135661456376326500176340ustar00rootroot00000000000000name: CI on: push: branches: - master # Routinely check that tests pass with new versions of dependencies. schedule: # Every day at 17:42 UTC / 9:42 Seattle (winter) / 10:42 Seattle (summer) - cron: "42 17 * * *" pull_request: workflow_dispatch: jobs: pytest-cram: name: test (python=${{ matrix.python-version }} biopython=${{ matrix.biopython-version || 'latest' }}) runs-on: ubuntu-latest strategy: matrix: python-version: - '3.8' - '3.9' - '3.10' - '3.11' biopython-version: # list of Biopython versions with support for a new Python version # from https://github.com/biopython/biopython/blob/master/NEWS.rst - '1.80' # first to support Python 3.10 and 3.11 - '' # latest defaults: run: shell: bash -l {0} env: COVERAGE_FILE: ${{ github.workspace }}/.coverage@python=${{ matrix.python-version }},biopython=${{ matrix.biopython-version || 'latest' }} COVERAGE_RCFILE: ${{ github.workspace }}/.coveragerc steps: - uses: actions/checkout@v4 - name: Set cache key run: echo "DATE=$(date +'%Y-%m-%d')" >> "$GITHUB_ENV" # While it may be tempting to install Augur using Conda to avoid hardcoding # the list of dependencies here, installing just the dependencies not # available on PyPI allows us to test against dependencies installed by pip, # which may have slightly different versions compared to Conda counterparts. - name: Install dependencies from Conda uses: mamba-org/setup-micromamba@v1 with: create-args: mafft raxml fasttree iqtree vcftools biopython=${{ matrix.biopython-version }} python=${{ matrix.python-version }} condarc: | channels: - conda-forge - bioconda channel_priority: strict cache-environment: true cache-environment-key: ${{ env.DATE }} environment-name: augur # Replace the Conda Augur installation with the local version. - run: pip install .[dev] - run: conda info - run: conda list - run: pytest -c pytest.python3.ini --cov=augur - run: cram tests/ env: AUGUR: coverage run -a ${{ github.workspace }}/bin/augur # Only upload coverage for one job - if: matrix.python-version == '3.11' && matrix.biopython-version == '' uses: actions/upload-artifact@v4 with: name: coverage path: "${{ env.COVERAGE_FILE }}" # TODO: Use the central pathogen-repo-ci workflow¹. Currently, this is not # possible because it only supports "stock" docker and conda runtimes. # ¹ https://github.com/nextstrain/.github/blob/-/.github/workflows/pathogen-repo-ci.yaml pathogen-repo-ci: runs-on: ubuntu-latest continue-on-error: true env: repodata_use_zst: true strategy: matrix: include: - { pathogen: avian-flu, build-args: auspice/flu_avian_h5n1_ha.json } - { pathogen: ebola } - { pathogen: lassa } - { pathogen: mumps } - { pathogen: ncov, build-args: all_regions -j 2 --profile nextstrain_profiles/nextstrain-ci, } - { pathogen: rsv } - { pathogen: seasonal-flu, build-args: --configfile profiles/ci/builds.yaml -p, } - { pathogen: tb } # Disable some pathogens until pathogen-repo-ci supports custom build directories # See issue https://github.com/nextstrain/.github/issues/63 # - { pathogen: mpox } # - { pathogen: zika } name: pathogen-repo-ci (${{ matrix.pathogen }}) defaults: run: shell: bash -l {0} steps: - uses: actions/checkout@v4 with: path: ./augur - name: Set cache key run: echo "DATE=$(date +'%Y-%m-%d')" >> "$GITHUB_ENV" # Set up a Conda environment that replicates Nextstrain's Conda runtime. - name: Install nextstrain-base from Conda uses: mamba-org/setup-micromamba@v1 with: create-args: nextstrain-base condarc: | channels: - nextstrain - conda-forge - bioconda channel_priority: strict cache-environment: true cache-environment-key: ${{ env.DATE }} environment-name: augur # Replace the Conda Augur installation with the local version. - run: pip install ./augur - uses: actions/checkout@v4 with: repository: nextstrain/${{ matrix.pathogen }} path: ./pathogen-repo - name: Copy example data working-directory: ./pathogen-repo run: | if [[ -d example_data ]]; then mkdir -p data/ cp -r -v example_data/* data/ else echo No example data to copy. fi - run: nextstrain build --ambient ./pathogen-repo ${{ matrix.build-args }} - if: always() uses: actions/upload-artifact@v4 with: name: output-${{ matrix.pathogen }} path: | ./pathogen-repo/auspice/ ./pathogen-repo/results/ ./pathogen-repo/benchmarks/ ./pathogen-repo/logs/ ./pathogen-repo/.snakemake/log/ codecov: if: github.repository == 'nextstrain/augur' needs: [pytest-cram] runs-on: ubuntu-latest steps: - uses: actions/checkout@v4 - uses: actions/setup-python@v5 - run: pip install coverage - uses: actions/download-artifact@v4 with: name: coverage - run: coverage combine .coverage@* - run: coverage xml - uses: codecov/codecov-action@v3 with: fail_ci_if_error: false build-docs: uses: nextstrain/.github/.github/workflows/docs-ci.yaml@master with: docs-directory: docs/ pip-install-target: .[dev] augur-24.2.2/.github/workflows/release.yaml000066400000000000000000000034021456376326500206450ustar00rootroot00000000000000name: Release run-name: Release ${{ inputs.version }} on: workflow_dispatch: inputs: version: description: 'New version X.X.X' required: true type: string jobs: run: runs-on: ubuntu-latest steps: - uses: actions/checkout@v4 with: # Fetch all branches and tags. fetch-depth: 0 - uses: actions/setup-python@v5 with: python-version: '3.10' - name: Set Nextstrain bot as git user run: | git config --global user.email "hello@nextstrain.org" git config --global user.name "Nextstrain bot" - run: python3 -m pip install --upgrade build twine - run: devel/release ${{ github.event.inputs.version}} - run: devel/test - uses: actions/upload-artifact@v4 with: name: dist path: dist/ - run: git push origin master tag ${{ github.event.inputs.version}} - name: Publish to PyPI run: twine upload dist/* env: TWINE_USERNAME: __token__ TWINE_PASSWORD: ${{ secrets.PYPI_API_TOKEN }} TWINE_REPOSITORY_URL: https://upload.pypi.org/legacy/ - name: Create GitHub Release run: ./devel/create-github-release "${{github.event.inputs.version}}" dist/* env: GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} rebuild-docker-image: needs: [run] runs-on: ubuntu-latest steps: # Delay for 10 minutes to allow the PyPI package to be available. # See https://github.com/nextstrain/docker-base/issues/128 - name: Sleep for 10 minutes run: sleep 600 shell: bash - run: gh workflow run ci.yml --repo nextstrain/docker-base env: GITHUB_TOKEN: ${{ secrets.GH_TOKEN_NEXTSTRAIN_BOT_WORKFLOW_DISPATCH }} augur-24.2.2/.github/workflows/sync-redirects.yaml000066400000000000000000000013161456376326500221650ustar00rootroot00000000000000name: Sync RTD redirects on: push: branches: - master paths: - docs/redirects.yaml - .github/workflows/sync-redirects.yaml # Manually triggered using GitHub's UI workflow_dispatch: jobs: sync: runs-on: ubuntu-latest steps: - uses: actions/checkout@v4 - uses: actions/setup-python@v5 - name: Upgrade Python toolchain run: python3 -m pip install --upgrade pip setuptools wheel - name: Install readthedocs-cli run: python3 -m pip install readthedocs-cli - name: Sync redirects run: rtd projects nextstrain-augur redirects sync -f docs/redirects.yaml --wet-run env: RTD_TOKEN: ${{ secrets.RTD_TOKEN }} augur-24.2.2/.gitignore000066400000000000000000000017301456376326500147360ustar00rootroot00000000000000# For augur repo # environment* temp* results* dengue/utils/ prepared/ processed/ auspice/ test_input/ test_output/ scratch/ s3/ build/ dist/ *stderr /docs/_build/ # Output files from running tests tests/functional/tree/full_aligned-delim.fasta.contree tests/functional/tree/full_aligned-delim.fasta.splits.nex tests/functional/tree/full_aligned-delim.fasta.ufboot tests/functional/tree/masked_aligned-delim.iqtree.log.xz tests/functional/tree/masked_aligned.fasta.xz # Transient error outputs from tests /tests/**/*.t.err # For Python # ############## *.pyc __pycache__/ .cache/ .coverage htmlcov/ augur.egg-info/ .mypy_cache/ nextstrain_augur.egg-info/ env/ .pytest_cache # Compiled source # ################### *.com *.class *.dll *.exe *.o *.so # OS generated files # ###################### .DS_Store .DS_Store? ._* .Spotlight-V100 .Trashes Icon? ehthumbs.db Thumbs.db # autosave # ############ *~ # IDE # ####### *sublime* .vscode # Recursively ignore log files **/*.log augur-24.2.2/.mailmap000066400000000000000000000015741456376326500143750ustar00rootroot00000000000000Alli Black Barney Potter Emma Hodcroft Emma Hodcroft Gytis Dudas James Hadfield James Hadfield James Hadfield John Huddleston Louise Moncla Richard Neher Richard Neher Richard Neher Richard Neher Richard Neher Richard Neher Sarah Murata Sidney Bell Sidney Bell Thomas Sibley Trevor Bedford Trevor Bedford augur-24.2.2/.pylintrc000066400000000000000000000406711456376326500146220ustar00rootroot00000000000000[MASTER] # A comma-separated list of package or module names from where C extensions may # be loaded. Extensions are loading into the active Python interpreter and may # run arbitrary code extension-pkg-whitelist= # Add files or directories to the blacklist. They should be base names, not # paths. ignore=CVS # Add files or directories matching the regex patterns to the blacklist. The # regex matches against base names, not paths. ignore-patterns= # Python code to execute, usually for sys.path manipulation such as # pygtk.require(). #init-hook= # Use multiple processes to speed up Pylint. jobs=1 # List of plugins (as comma separated values of python modules names) to load, # usually to register additional checkers. load-plugins= # Pickle collected data for later comparisons. persistent=yes # Specify a configuration file. #rcfile= # When enabled, pylint would attempt to guess common misconfiguration and emit # user-friendly hints instead of false-positive error messages suggestion-mode=yes # Allow loading of arbitrary C extensions. Extensions are imported into the # active Python interpreter and may run arbitrary code. unsafe-load-any-extension=no [MESSAGES CONTROL] # Only show warnings with the listed confidence levels. Leave empty to show # all. Valid levels: HIGH, INFERENCE, INFERENCE_FAILURE, UNDEFINED confidence= # Disable the message, report, category or checker with the given id(s). You # can either give multiple identifiers separated by comma (,) or put this # option multiple times (only on the command line, not in the configuration # file where it should appear only once).You can also use "--disable=all" to # disable everything first and then reenable specific checks. For example, if # you want to run only the similarities checker, you can use "--disable=all # --enable=similarities". If you want to run only the classes checker, but have # no Warning level messages displayed, use"--disable=all --enable=classes # --disable=W" disable=print-statement, parameter-unpacking, unpacking-in-except, old-raise-syntax, backtick, long-suffix, old-ne-operator, old-octal-literal, import-star-module-level, non-ascii-bytes-literal, invalid-unicode-literal, raw-checker-failed, bad-inline-option, locally-disabled, locally-enabled, file-ignored, suppressed-message, useless-suppression, deprecated-pragma, apply-builtin, basestring-builtin, buffer-builtin, cmp-builtin, coerce-builtin, execfile-builtin, file-builtin, long-builtin, raw_input-builtin, reduce-builtin, standarderror-builtin, unicode-builtin, xrange-builtin, coerce-method, delslice-method, getslice-method, setslice-method, no-absolute-import, old-division, dict-iter-method, dict-view-method, next-method-called, metaclass-assignment, indexing-exception, raising-string, reload-builtin, oct-method, hex-method, nonzero-method, cmp-method, input-builtin, round-builtin, intern-builtin, unichr-builtin, map-builtin-not-iterating, zip-builtin-not-iterating, range-builtin-not-iterating, filter-builtin-not-iterating, using-cmp-argument, eq-without-hash, div-method, idiv-method, rdiv-method, exception-message-attribute, invalid-str-codec, sys-max-int, bad-python3-import, deprecated-string-function, deprecated-str-translate-call, deprecated-itertools-function, deprecated-types-field, next-method-defined, dict-items-not-iterating, dict-keys-not-iterating, dict-values-not-iterating, deprecated-operator-function, deprecated-urllib-function, xreadlines-attribute, deprecated-sys-function, exception-escape, comprehension-escape, missing-docstring, bad-whitespace, line-too-long, invalid-name, wrong-import-order, multiple-imports, no-else-return, unscriptable-object, relative-beyond-top-level, no-member # Enable the message, report, category or checker with the given id(s). You can # either give multiple identifier separated by comma (,) or put this option # multiple time (only on the command line, not in the configuration file where # it should appear only once). See also the "--disable" option for examples. enable=c-extension-no-member [REPORTS] # Python expression which should return a note less than 10 (10 is the highest # note). You have access to the variables errors warning, statement which # respectively contain the number of errors / warnings messages and the total # number of statements analyzed. This is used by the global evaluation report # (RP0004). evaluation=10.0 - ((float(5 * error + warning + refactor + convention) / statement) * 10) # Template used to display messages. This is a python new-style format string # used to format the message information. See doc for all details #msg-template= # Set the output format. Available formats are text, parseable, colorized, json # and msvs (visual studio).You can also give a reporter class, eg # mypackage.mymodule.MyReporterClass. output-format=text # Tells whether to display a full report or only the messages reports=no # Activate the evaluation score. score=yes [REFACTORING] # Maximum number of nested blocks for function / method body max-nested-blocks=5 # Complete name of functions that never returns. When checking for # inconsistent-return-statements if a never returning function is called then # it will be considered as an explicit return statement and no message will be # printed. never-returning-functions=optparse.Values,sys.exit [BASIC] # Naming style matching correct argument names argument-naming-style=snake_case # Regular expression matching correct argument names. Overrides argument- # naming-style #argument-rgx= # Naming style matching correct attribute names attr-naming-style=snake_case # Regular expression matching correct attribute names. Overrides attr-naming- # style #attr-rgx= # Bad variable names which should always be refused, separated by a comma bad-names=foo, bar, baz, toto, tutu, tata # Naming style matching correct class attribute names class-attribute-naming-style=any # Regular expression matching correct class attribute names. Overrides class- # attribute-naming-style #class-attribute-rgx= # Naming style matching correct class names class-naming-style=PascalCase # Regular expression matching correct class names. Overrides class-naming-style #class-rgx= # Naming style matching correct constant names const-naming-style=UPPER_CASE # Regular expression matching correct constant names. Overrides const-naming- # style #const-rgx= # Minimum line length for functions/classes that require docstrings, shorter # ones are exempt. docstring-min-length=-1 # Naming style matching correct function names function-naming-style=snake_case # Regular expression matching correct function names. Overrides function- # naming-style #function-rgx= # Good variable names which should always be accepted, separated by a comma good-names=i, j, k, ex, Run, _ # Include a hint for the correct naming format with invalid-name include-naming-hint=no # Naming style matching correct inline iteration names inlinevar-naming-style=any # Regular expression matching correct inline iteration names. Overrides # inlinevar-naming-style #inlinevar-rgx= # Naming style matching correct method names method-naming-style=snake_case # Regular expression matching correct method names. Overrides method-naming- # style #method-rgx= # Naming style matching correct module names module-naming-style=snake_case # Regular expression matching correct module names. Overrides module-naming- # style #module-rgx= # Colon-delimited sets of names that determine each other's naming style when # the name regexes allow several styles. name-group= # Regular expression which should only match function or class names that do # not require a docstring. no-docstring-rgx=^_ # List of decorators that produce properties, such as abc.abstractproperty. Add # to this list to register other decorators that produce valid properties. property-classes=abc.abstractproperty # Naming style matching correct variable names variable-naming-style=snake_case # Regular expression matching correct variable names. Overrides variable- # naming-style #variable-rgx= [FORMAT] # Expected format of line ending, e.g. empty (any line ending), LF or CRLF. expected-line-ending-format= # Regexp for a line that is allowed to be longer than the limit. ignore-long-lines=^\s*(# )??$ # Number of spaces of indent required inside a hanging or continued line. indent-after-paren=4 # String used as indentation unit. This is usually " " (4 spaces) or "\t" (1 # tab). indent-string=' ' # Maximum number of characters on a single line. max-line-length=100 # Maximum number of lines in a module max-module-lines=1000 # List of optional constructs for which whitespace checking is disabled. `dict- # separator` is used to allow tabulation in dicts, etc.: {1 : 1,\n222: 2}. # `trailing-comma` allows a space between comma and closing bracket: (a, ). # `empty-line` allows space-only lines. no-space-check=trailing-comma, dict-separator # Allow the body of a class to be on the same line as the declaration if body # contains single statement. single-line-class-stmt=no # Allow the body of an if to be on the same line as the test if there is no # else. single-line-if-stmt=no [LOGGING] # Logging modules to check that the string format arguments are in logging # function parameter format logging-modules=logging [MISCELLANEOUS] # List of note tags to take in consideration, separated by a comma. notes=FIXME, XXX, TODO [SIMILARITIES] # Ignore comments when computing similarities. ignore-comments=yes # Ignore docstrings when computing similarities. ignore-docstrings=yes # Ignore imports when computing similarities. ignore-imports=no # Minimum lines number of a similarity. min-similarity-lines=4 [SPELLING] # Limits count of emitted suggestions for spelling mistakes max-spelling-suggestions=4 # Spelling dictionary name. Available dictionaries: none. To make it working # install python-enchant package. spelling-dict= # List of comma separated words that should not be checked. spelling-ignore-words= # A path to a file that contains private dictionary; one word per line. spelling-private-dict-file= # Tells whether to store unknown words to indicated private dictionary in # --spelling-private-dict-file option instead of raising a message. spelling-store-unknown-words=no [TYPECHECK] # List of decorators that produce context managers, such as # contextlib.contextmanager. Add to this list to register other decorators that # produce valid context managers. contextmanager-decorators=contextlib.contextmanager # List of members which are set dynamically and missed by pylint inference # system, and so shouldn't trigger E1101 when accessed. Python regular # expressions are accepted. generated-members= # Tells whether missing members accessed in mixin class should be ignored. A # mixin class is detected if its name ends with "mixin" (case insensitive). ignore-mixin-members=yes # This flag controls whether pylint should warn about no-member and similar # checks whenever an opaque object is returned when inferring. The inference # can return multiple potential results while evaluating a Python object, but # some branches might not be evaluated, which results in partial inference. In # that case, it might be useful to still emit no-member and other checks for # the rest of the inferred objects. ignore-on-opaque-inference=yes # List of class names for which member attributes should not be checked (useful # for classes with dynamically set attributes). This supports the use of # qualified names. ignored-classes=optparse.Values,thread._local,_thread._local # List of module names for which member attributes should not be checked # (useful for modules/projects where namespaces are manipulated during runtime # and thus existing member attributes cannot be deduced by static analysis. It # supports qualified module names, as well as Unix pattern matching. ignored-modules= # Show a hint with possible names when a member name was not found. The aspect # of finding the hint is based on edit distance. missing-member-hint=yes # The minimum edit distance a name should have in order to be considered a # similar match for a missing member name. missing-member-hint-distance=1 # The total number of similar names that should be taken in consideration when # showing a hint for a missing member. missing-member-max-choices=1 [VARIABLES] # List of additional names supposed to be defined in builtins. Remember that # you should avoid to define new builtins when possible. additional-builtins= # Tells whether unused global variables should be treated as a violation. allow-global-unused-variables=yes # List of strings which can identify a callback function by name. A callback # name must start or end with one of those strings. callbacks=cb_, _cb # A regular expression matching the name of dummy variables (i.e. expectedly # not used). dummy-variables-rgx=_+$|(_[a-zA-Z0-9_]*[a-zA-Z0-9]+?$)|dummy|^ignored_|^unused_ # Argument names that match this expression will be ignored. Default to name # with leading underscore ignored-argument-names=_.*|^ignored_|^unused_ # Tells whether we should check for unused import in __init__ files. init-import=no # List of qualified module names which can have objects that can redefine # builtins. redefining-builtins-modules=six.moves,past.builtins,future.builtins,io,builtins [CLASSES] # List of method names used to declare (i.e. assign) instance attributes. defining-attr-methods=__init__, __new__, setUp # List of member names, which should be excluded from the protected access # warning. exclude-protected=_asdict, _fields, _replace, _source, _make # List of valid names for the first argument in a class method. valid-classmethod-first-arg=cls # List of valid names for the first argument in a metaclass class method. valid-metaclass-classmethod-first-arg=mcs [DESIGN] # Maximum number of arguments for function / method max-args=5 # Maximum number of attributes for a class (see R0902). max-attributes=7 # Maximum number of boolean expressions in a if statement max-bool-expr=5 # Maximum number of branch for function / method body max-branches=12 # Maximum number of locals for function / method body max-locals=15 # Maximum number of parents for a class (see R0901). max-parents=7 # Maximum number of public methods for a class (see R0904). max-public-methods=20 # Maximum number of return / yield for function / method body max-returns=6 # Maximum number of statements in function / method body max-statements=50 # Minimum number of public methods for a class (see R0903). min-public-methods=2 [IMPORTS] # Allow wildcard imports from modules that define __all__. allow-wildcard-with-all=no # Analyse import fallback blocks. This can be used to support both Python 2 and # 3 compatible code, which means that the block might have code that exists # only in one or another interpreter, leading to false positives when analysed. analyse-fallback-blocks=no # Deprecated modules which should not be used, separated by a comma deprecated-modules=optparse,tkinter.tix # Create a graph of external dependencies in the given file (report RP0402 must # not be disabled) ext-import-graph= # Create a graph of every (i.e. internal and external) dependencies in the # given file (report RP0402 must not be disabled) import-graph= # Create a graph of internal dependencies in the given file (report RP0402 must # not be disabled) int-import-graph= # Force import order to recognize a module as part of the standard # compatibility libraries. known-standard-library= # Force import order to recognize a module as part of a third party library. known-third-party=enchant [EXCEPTIONS] # Exceptions that will emit a warning when being caught. Defaults to # "Exception" overgeneral-exceptions=Exception augur-24.2.2/.readthedocs.yml000066400000000000000000000005441456376326500160360ustar00rootroot00000000000000--- version: 2 build: os: ubuntu-22.04 tools: python: "3.11" jobs: post_checkout: # Convert the shallow clone to a complete one so author information can be # generated from the full git history in conf.py. - git fetch --unshallow python: install: - method: pip path: . extra_requirements: - dev augur-24.2.2/CHANGES.md000066400000000000000000002774271456376326500143620ustar00rootroot00000000000000# CHANGELOG ## __NEXT__ ## 24.2.2 (16 February 2024) ### Bug Fixes * filter: In versions 24.2.0 and 24.2.1, `--query` stopped working in cases where internal optimizations added in version 24.2.0 failed to parse the columns from the query. It now falls back to non-optimized behavior that allows queries to work. [#1418][] (@victorlin) * filter: Handle backtick quoting in internal optimizations of `--query`. [#1417][] (@victorlin) [#1417]: https://github.com/nextstrain/augur/pull/1417 [#1418]: https://github.com/nextstrain/augur/pull/1418 ## 24.2.1 (14 February 2024) ### Bug Fixes * frequencies: Fixed a bug introduced in 24.2.0 that prevented `--method diffusion` from working alongside `--tree`. [#1412][] (@victorlin) [#1412]: https://github.com/nextstrain/augur/issues/1412 ## 24.2.0 (12 February 2024) ### Features * filter: Added a new option `--query-columns` that allows specifying what columns are used in `--query` along with the expected data types. If unspecified, automatic detection of columns and types is attempted. [#1294][] (@victorlin) * `augur.io.read_metadata`: A new optional `columns` argument allows specifying a subset of columns to load. The default behavior still loads all columns, so this is not a breaking change. [#1294][] (@victorlin) * `augur parse`: A new optional `--output-id-field` argument allows the user to select any ID field for the produced FASTA file (e.g. 'accession' instead of 'name' or 'strain'). [#1403][] (@j23414) * When no `--output-id-field` is given and the data has both `name` and `strain` fields, continue to preferentially use `name` over `strain` as the sequence ID field; but, throw a deprecation warning that the order will be switched to prefer `strain` over `name` in the future to be consistent with the rest of Augur. * Added entry to [DEPRECATED.md](./DEPRECATED.md). * Compression should now be supported for all input and output files. Please [open an issue](https://github.com/nextstrain/augur/issues) if you find one that doesn't! [#1381][] (@victorlin) * export v2: Add support to specify metadata columns to export without using them as colorings. This can be done with the `metadata_columns` property in the Auspice config JSON or via the `--metadata-columns` flag in the command line. [#1384][] (@joverlee521) ### Bug Fixes * filter: In version 24.1.0, automatic conversion of boolean columns was accidentally removed. It has been restored with additional support for empty values evaluated as `None`. [#1410][] (@victorlin) * filter: The order of rows in `--output-metadata` and `--output-strains` now reflects the order in the original `--metadata`. [#1294][] (@victorlin) * filter, frequencies, refine: Performance improvements to reading the input metadata file. [#1294][] (@victorlin) * For filter, this comes with increased writing times for `--output-metadata` and `--output-strains`. However, net I/O speed still decreased during testing of this change. * filter: Updated the help text of `--include` and `--include-where` to explicitly state that this can add strains that are missing an entry from `--sequences`. [#1389][] (@victorlin) * filter: Fixed the summary messages to properly reflect force-inclusion of strains that are missing an entry from `--sequences`. [#1389][] (@victorlin) * filter: Updated wording of summary messages. [#1389][] (@victorlin) * Enforce UTF-8 encoding when reading and writing files. Improve error messages when a non-UTF-8 file is used. [#1381][] (@victorlin) [#1294]: https://github.com/nextstrain/augur/pull/1294 [#1381]: https://github.com/nextstrain/augur/pull/1381 [#1384]: https://github.com/nextstrain/augur/pull/1384 [#1389]: https://github.com/nextstrain/augur/pull/1389 [#1410]: https://github.com/nextstrain/augur/pull/1410 [#1403]: https://github.com/nextstrain/augur/pull/1403 ## 24.1.0 (30 January 2024) ### Features * `augur.io.read_metadata`: A new optional `dtype` argument allows custom data types for all columns. Automatic type inference still happens by default, so this is not a breaking change. [#1252][] (@victorlin) * `augur.io.read_vcf` has been removed and usage replaced with TreeTime's function of the same name which has improved validation of the VCF file. [#1366][] (@jameshadfield) ### Bug Fixes * filter, frequencies, refine: Speed up reading of the metadata file. [#1252][] (@victorlin) * traits: Previously, columns with only numeric values were treated as numerical data. These are now treated as categorical data for discrete trait analysis. [#1252][] (@victorlin) * Support Biopython `≥1.82` by requiring bcbio-gff `≥0.7.1`. [#1400][] (@victorlin) [#1252]: https://github.com/nextstrain/augur/pull/1252 [#1366]: https://github.com/nextstrain/augur/pull/1366 [#1400]: https://github.com/nextstrain/augur/pull/1400 ## 24.0.0 (22 January 2024) ### Major Changes * ancestral, translate: For VCF inputs please ensure you are using TreeTime 0.11.2 or later. A large number of bugfixes and improvements have been added in both Augur and TreeTime. [#1355][] and [TreeTime #263][] (@jameshadfield) * ancestral, translate: GenBank files now require the (GFF mandatory) source feature to be present. [#1351][] (@jameshadfield) * ancestral, translate: For GFF files, we extract the genome/sequence coordinates by inspecting the sequence-region pragma, region type and/or source type. This information is now required. [#1351][] (@jameshadfield) ### Features * ancestral, translate: Improvements to VCF inputs / outputs. [#1355][] and [TreeTime #263][] (@jameshadfield) * Output VCF will better match the input VCF, including CHROM name and ploidy encoding. * VCF inputs now require `--vcf-reference-output` * AA sequences are now exported for the tree root * VCF writing is now 3 orders of magnitude faster (dataset dependent) * ancestral, translate: A range of improvements to how we parse GFF and GenBank reference files. [#1351][] (@jameshadfield) * translate will now always export a 'nuc' annotation in the output JSON, allowing it to pass validation * Gene/CDS names of 'nuc' are now forbidden. * If a Gene/CDS in the GFF/GenBank file is unparsed we now print a warning. * ancestral: For VCF alignments, a VCF output file is now only created when requested via `--output-vcf`. [#1344][] (@jameshadfield) * ancestral: Improvements to command line arguments. [#1344][] (@jameshadfield) * Incompatible arguments are now checked, especially related to VCF vs FASTA inputs. * `--vcf-reference` and `--root-sequence` are now mutually exclusive. * translate: Tree nodes are checked against the node-data JSON input to ensure sequences are present. [#1348][] (@jameshadfield) * utils::load_features: This function may now raise `AugurError`. [#1351][] (@jameshadfield) * export v2: Automatically minify large outputs. Use `--no-minify-json` to disable this default behavior. [#1352][] (@victorlin) * Added a new file [DEPRECATED.md](./DEPRECATED.md) to document timelines and progress of deprecated features in the Augur CLI and Python API. [#1371][] (@victorlin) ### Bug Fixes * ancestral, translate: Various fixes to VCF inputs / outputs. [#1355][] and [TreeTime #263][] (@jameshadfield) * Fix incorrect (but passing) tests * Fix case-sensitive sequence comparisons between the root and reference sequences. * Fix a bug where ambiguous alleles are not inferred (see [#1380][] for full details). * Fix a bug where positions with no sequence information were assigned a base because the mask was not being computed (see [#1382][] for full details). * More than one ALT allele is now correctly parsed * Mutations followed by an insertion are now parsed * Unchanged ref genotypes are now encoded as '0' rather than '.' * ALT alleles "*" are now valid (introduced in VCF spec 4.2, but observed in VCF 4.1 files) * Positions with no variation are no longer exported * ancestral, translate: Fixes for JSON (non-VCF) inputs. [#1355][] (@jameshadfield) * The "reference" translations are now from the provided reference sequence, not from the root of the tree. [#1355][] (@jameshadfield) * Fix a bug where positions with no sequence information were assigned a base because the mask was not applied (see [#1382][] for full details) * ancestral, translate: Avoid incompatibilities with Biopython >=1.82. [#1374][], [#1387][] (@victorlin) * ancestral, translate: Address Biopython deprecation warnings. [#1379][] (@victorlin) * ancestral: Previously, the help text for `--genes` falsely claimed that it could accept a file. Now, it can truly claim that. [#1353][] (@victorlin) * translate: The 'source' ID for GFF files is now ignored as a potential gene feature (it is still used for overall nuc coords). [#1348][] (@jameshadfield) * translate: Improvements to command line arguments. [#1348][] (@jameshadfield) * `--tree` and `--ancestral-sequences` are now required arguments. * separate VCF-only arguments into their own group * translate: Fixes a bug in the parsing behaviour of GFF files whereby the presence of the `--genes` command line argument would change how we read individual GFF lines. Issue [#1349][], PR [#1351][] (@jameshadfield) * If `TreeTimeError` is encountered Augur now exits with code 2 rather than 0. (This restores the original behaviour.) [#1367][] (@jameshadfield) * Deprecate `read_strains` from `augur.utils` and add it to the public API under `augur.io`. [#1353][] (@victorlin) [#1344]: https://github.com/nextstrain/augur/pull/1344 [#1348]: https://github.com/nextstrain/augur/pull/1348 [#1351]: https://github.com/nextstrain/augur/pull/1351 [#1349]: https://github.com/nextstrain/augur/issues/1349 [#1367]: https://github.com/nextstrain/augur/pull/1367 [#1371]: https://github.com/nextstrain/augur/pull/1371 [#1374]: https://github.com/nextstrain/augur/pull/1374 [#1379]: https://github.com/nextstrain/augur/pull/1379 [#1352]: https://github.com/nextstrain/augur/pull/1352 [#1353]: https://github.com/nextstrain/augur/pull/1353 [#1355]: https://github.com/nextstrain/augur/pull/1355 [#1380]: https://github.com/nextstrain/augur/issues/1380 [#1382]: https://github.com/nextstrain/augur/issues/1382 [#1387]: https://github.com/nextstrain/augur/pull/1387 [TreeTime #263]: https://github.com/neherlab/treetime/pull/263 ## 23.1.1 (7 November 2023) ### Bug Fixes * Fix Python 3.11 installation for Conda environments. [#1334][] (@victorlin) * Bump `pyfastx` dependency to major versions 1 and 2. [#1335][] (@victorlin) [#1334]: https://github.com/nextstrain/augur/issues/1334 [#1335]: https://github.com/nextstrain/augur/pull/1335 ## 23.1.0 (22 September 2023) ### Features * Support treetime 0.11.* [#1310][] (@corneliusroemer) * export: Allow minimal export using only a (newick) tree in `augur export v2`. [#1299][] (@jameshadfield) * A number of schema updates and improvements [#1299][] (@jameshadfield) * We now require all nodes to have `node_attrs` on them with one of `div` or `num_date` present * Some never-used properties are removed from the schemas, including a pattern for defining nucleotide INDELs which was never used by augur or auspice. * Tip label defaults are now settable within the auspice-config JSON * Empty colorings definitions are allowed (the tree will be grey in Auspice) ### Bug fixes * ancestral: Export amino acid sequences inferred for the root node of the tree in the node data JSON output for compatibility with `augur translate` output. [#1317][] (@huddlej) [#1299]: https://github.com/nextstrain/augur/pull/1299 [#1310]: https://github.com/nextstrain/augur/pull/1310 [#1317]: https://github.com/nextstrain/augur/pull/1317 ## 23.0.0 (5 September 2023) ### Major Changes * Drop support for Python 3.7. [#1296][] (@victorlin) ### Features * export v2: Allow the root-sequence data to be included (inlined) in the main dataset JSON file, avoiding the need for a sidecar `_root-sequence.json` file. [#1295][] (@jameshadfield) [#1295]: https://github.com/nextstrain/augur/pull/1295 [#1296]: https://github.com/nextstrain/augur/pull/1296 ## 22.4.0 (29 August 2023) ### Features * refine: Export covariance matrix and standard deviation for clock rate regression in the node data JSON output when these values are calculated by TreeTime. These new values appear in the `clock` data structure of the JSON output as `cov` and `rate_std` keys, respectively. [#1284][] (@huddlej) ### Bug fixes * clades: Fix outputs for genes named `NA` (previously the value was replaced by `nan`). [#1293][] (@rneher) * distance: Improve documentation by describing how gaps get treated as indels and how users can ignore specific characters in distance calculations. [#1285][] (@huddlej) * Fix help output compatibility with non-Unicode streams. [#1290][] (@victorlin) [#1284]: https://github.com/nextstrain/augur/pull/1284 [#1285]: https://github.com/nextstrain/augur/pull/1285 [#1290]: https://github.com/nextstrain/augur/pull/1290 [#1293]: https://github.com/nextstrain/augur/pull/1293 ## 22.3.0 (14 August 2023) ### Features * ancestral: add functionality to reconstruct ancestral amino acid sequences and add inferred mutations to the `node_data_json` with output equivalent to `augur translate`. `ancestral` now takes an annotation (`--annotation`), a list of genes (`--genes`), and a file name pattern for amino acid alignments (`--translations`). Mutations for each of these genes will be inferred and added to the output JSON to each node as a list at `['aa_muts'][gene]`. The annotations will be added to the `annotation` field in the output JSON. Inferred amino acids sequences can be saved with the new `--output-translations` argument. [#1258][] (@rneher, @huddlej) * ancestral: add the ability to report mutations relative to a sequence other than the inferred root of the tree. This sequence can be specified via `--root-sequence` and difference between this sequence and the inferred root of the tree will be added as mutations to the root node for nucleotides and amino acids. All differences between the specified `root-sequence` and the inferred sequence of the root node of the tree will be added as mutations to the root node. This was previously already possible for `vcf` input via `--vcf-reference`. [#1258][] (@rneher) * refine: add `mid_point` as rooting option to `refine`. [#1257][] (@rneher) ### Bug fixes * filter: In version 22.2.0, `--query` would fail when the `.str` accessor was used on a column. This has been fixed. [#1277][] (@victorlin) [#1257]: https://github.com/nextstrain/augur/pull/1257 [#1258]: https://github.com/nextstrain/augur/pull/1258 [#1277]: https://github.com/nextstrain/augur/issues/1277 ## 22.2.0 (31 July 2023) ### Features * Adds a new sub-command augur curate titlecase. The titlecase command is intended to apply titlecase to string fields in a metadata record (e.g. BRAINE-LE-COMTE, FRANCE -> Braine-le-Comte, France). Previously, this was available in the transform-string-fields script within the monkeypox repo. [#1197][] (@j23414 and @joverlee521) [#1197]: https://github.com/nextstrain/augur/pull/1197 ### Bug fixes * export v2: Previously, when `strain` was not used as the metadata ID column, node attributes might have gone missing from the final Auspice JSON. This has been fixed. [#1260][], [#1262][] (@victorlin, @joverlee521) * export v1: Added a deprecation warning for this command. [#1265][] (@victorlin) * export v1: The recently introduced flag `--metadata-id-columns` did not work properly due to the same `export v2` bug that was fixed in this release. Instead of fixing it in `export v1`, drop the broken feature since this command is no longer being maintained. [#1265][] (@victorlin) * filter: Expose internal Pandas errors from `--query` which may be useful to users. [#1267][] (@victorlin) * filter: Previously, `--query` would fail when numerical comparisons were used on columns with missing values. This has been fixed. [#1269][] (@victorlin) [#1260]: https://github.com/nextstrain/augur/issues/1260 [#1262]: https://github.com/nextstrain/augur/issues/1262 [#1265]: https://github.com/nextstrain/augur/pull/1265 [#1267]: https://github.com/nextstrain/augur/pull/1267 [#1269]: https://github.com/nextstrain/augur/issues/1269 ## 22.1.0 (10 July 2023) ### Features * export, frequencies, refine, traits: Add a new flag `--metadata-id-columns` to customize the possible metadata ID columns. Previously, this was only available in `augur filter`. [#1240][] (@victorlin) * Add new sub-subcommand augur curate format-dates. The format-dates command is intended to be used to format date fields to ISO 8601 date format (YYYY-MM-DD), where incomplete dates are masked with `XX` (e.g. 2023 -> 2023-XX-XX). [#1146][] (@joverlee521) ### Bug fixes * parse: Fix a bug where `--fix-dates` was always applied, with a default of `--fix-dates=monthfirst`. Now, running without `--fix-dates` will leave dates as-is. [#1247][] (@victorlin) * `augur.io.open_file`: Previously, the docs described a type restriction on `path_or_buffer` but it was not enforced. It has been updated to allow all I/O classes, and is enforced at run-time. [#1250][] (@victorlin) * filter: Fix a bug where data files consisting of only numerical strain names would not work when both `--metadata` and `--sequences` are passed. [#1256][] (@victorlin) [#1146]: https://github.com/nextstrain/augur/pull/1146 [#1240]: https://github.com/nextstrain/augur/pull/1240 [#1247]: https://github.com/nextstrain/augur/issues/1247 [#1250]: https://github.com/nextstrain/augur/pull/1250 [#1256]: https://github.com/nextstrain/augur/pull/1256 ## 22.0.3 (14 June 2023) ### Bug fixes * utils: Serialize pandas Series in `write_json`. [#1213][] (@victorlin) [#1213]: https://github.com/nextstrain/augur/pull/1213 ## 22.0.2 (26 May 2023) ### Bug fixes * CI: Add a Github action to test augur on 8 Nextstrain pathogen workflows using example data. [#1217][] (@corneliusroemer) * parse: Denote required arguments including `--fields`, `--output-sequences`, and `--output-metadata`. [#1228][] (@huddlej) * Fix export of the `strand` attribute of gene annotations. Previously, features on the negative strand were not annotated as such since the code assumed that the `strand` attribute was boolean instead of `[-1, +1]`. [#1211] @rneher and @j23414. * augur.io.read_metadata: explicitly set `date` column as `string` type to prevent year only dates from being inferred as integers. [#1235][] (@joverlee521) [#1211]: https://github.com/nextstrain/augur/pull/1211 [#1217]: https://github.com/nextstrain/augur/pull/1217 [#1228]: https://github.com/nextstrain/augur/pull/1228 [#1235]: https://github.com/nextstrain/augur/pull/1235 ## 22.0.1 (16 May 2023) ### Bug fixes * export: No longer export duplicate entries in the colorings array, a bug which has been present in Augur since at least v12 [#719][]. [#1218][] (@jameshadfield) * export: In version 22.0.0, some configurations of export may have resulted in the clade coloring appearing last in the Auspice dropdown rather than first. This is now fixed. [#1218] (@jameshadfield) * export: In version 22.0.0, validation of `augur.utils.read_node_data` was changed to error when a node data JSON did not contain any actual data. This causes export to error when an empty node data JSON is passed, as for example in ncov's pathogen-ci. This is now fixed by warning instead. The bug was originally introduced in PR [#728][]. [#1214][] (@corneliusroemer) [#719]: https://github.com/nextstrain/augur/issues/719 [#1214]: https://github.com/nextstrain/augur/pull/1214 [#1218]: https://github.com/nextstrain/augur/pull/1218 ## 22.0.0 (9 May 2023) ### Major Changes * export, filter, frequencies, refine, traits: From versions 10.0.0 through 21.1.0, arbitrary delimiters for `--metadata` were supported due to internal implementation differences from the advertised CSV and TSV support. Starting with this version, non-CSV/TSV files will no longer be supported by default. To adjust for this breaking change, specify custom delimiters with the new `--metadata-delimiters` flag. [#1196][] (@victorlin) * `augur.io.read_metadata`: Previously, this supported any arbitrary delimiters for the metadata. Now, it only supports a list of possible delimiters represented by the new `delimiters` keyword argument, which defaults to `,` and `\t`. [#812][] (@victorlin) * refine: The seeding method for `--seed` has been updated. This affects usages that rely on the reproducibility of outputs with the same `--seed` value prior to this version. Outputs from this version onwards should be reproducible until the next implementation change, which we don't expect to happen any time soon. [#1207][] (@rneher) ### Features * Constrain `bcbio-gff` to >=0.7.0 and allow `Biopython` >=1.81 again. We had to introduce the `Biopython` constraint in v21.0.1 (see [#1152][]) due to `bcbio-gff` <0.7.0 relying on the removed `Biopython` feature `UnknownSeq`. [#1178][] (@corneliusroemer) * `augur.io.read_metadata` (used by export, filter, frequencies, refine, and traits): Previously, this used the Python parser engine for [`pandas.read_csv()`][]. Updated to use the C engine for faster reading of metadata. [#812][] (@victorlin) * curate: Allow custom metadata delimiters with the new `--metadata-delimiters` flag. [#1196][] (@victorlin) * Bump the default recursion limit to 10,000. Users can continue to override this limit with the environment variable `AUGUR_RECURSION_LIMIT`. [#1200][] (@joverlee521) * clades, export v2: Clade labels + coloring keys are now definable via arguments to augur clades allowing pipelines to use multiple invocations of augur clades resulting in multiple sets of colors and branch labels. How labels are stored in the (intermediate) node-data JSON files has changed. This should be fully backwards compatible for pipelines using augur commands, however custom scripts may need updating. PR [#728][] (@jameshadfield) * refine: add flag `--max-iter` to control the maximal number of iterations TreeTime uses to infer time trees. This was previously hard-coded to 2, which is now the default. [#1203][] (@rneher) * refine: add flags `--greedy-resolve` and `--stochastic-resolve` to customize polytomy resolution. [#1203][], [#1207][] (@rneher) * `--greedy-resolve`: resolve polytomies by greedily minimizing tree length (default behavior, unchanged). * `--stochastic-resolve`: resolve polytomies as random coalescent trees. * These are mutually exclusive with the pre-existing `--keep-polytomies` flag. ### Bug fixes * filter, frequencies, refine, parse: Previously, ambiguous dates in the future had a limit of today's date imposed on the upper value but not the lower value. It is now imposed on the lower value as well. [#1171][] (@victorlin) * refine: `--year-bounds` was ignored in versions 9.0.0 through 20.0.0. It now works. [#1136][] (@victorlin) * tree: Input alignment filenames which do not end in `.fasta` are now properly handled when using IQ-TREE. Previously their contents were overwritten first by `augur tree` itself (resulting in truncation) and then by the log output of IQ-TREE (resulting in an error). Thanks to Jon Bråte for reporting this bug. [#1206][] (@tsibley) * clades: A number of small bug fixes, improvements to documentation, tests and improved error detection. [#1199][] (@jameshadfield) [#728]: https://github.com/nextstrain/augur/pull/728 [#812]: https://github.com/nextstrain/augur/pull/812 [#1136]: https://github.com/nextstrain/augur/issues/1136 [#1152]: https://github.com/nextstrain/augur/pull/1152 [#1171]: https://github.com/nextstrain/augur/issues/1171 [#1178]: https://github.com/nextstrain/augur/pull/1178 [#1196]: https://github.com/nextstrain/augur/pull/1196 [#1199]: https://github.com/nextstrain/augur/pull/1199 [#1200]: https://github.com/nextstrain/augur/pull/1200 [#1203]: https://github.com/nextstrain/augur/pull/1203 [#1206]: https://github.com/nextstrain/augur/pull/1206 [#1207]: https://github.com/nextstrain/augur/pull/1207 [`pandas.read_csv()`]: https://pandas.pydata.org/pandas-docs/version/1.5/reference/api/pandas.read_csv.html ## 21.1.0 (14 March 2023) ### Features * filter: Add `--empty-output-reporting={error,warn,silent}` option to allow filter to produce empty outputs without raising an error. The default behavior is still to raise an error when filter produces an empty output, so users will have to explicitly pass the "warn" or "silent" value to bypass the error. [#1175][] (@joverlee521) ### Bug fixes * translate: Fix error handling when features cannot be read from reference sequence file. [#1168][] (@victorlin) * translate: Remove an unnecessary check which allowed for inaccurate error messages to be shown. [#1169][] (@victorlin) * frequencies: Previously, monthly pivot points calculated from the end of a month may have been shifted by 1-3 days. This is now fixed. [#1150][] (@victorlin) * docs: Fix minor formatting issues. [#1095][] (@victorlin) * Update development status on PyPI from "3 - Alpha" to "5 - Production/Stable". This should have been done since the beginning of this changelog, but now it is official. [#1160][] (@corneliusroemer) [#1095]: https://github.com/nextstrain/augur/pull/1095 [#1150]: https://github.com/nextstrain/augur/pull/1150 [#1160]: https://github.com/nextstrain/augur/pull/1160 [#1168]: https://github.com/nextstrain/augur/pull/1168 [#1169]: https://github.com/nextstrain/augur/pull/1169 [#1175]: https://github.com/nextstrain/augur/pull/1175 ## 21.0.1 (17 February 2023) ### Bug fixes * Constrain Biopython version to <=1.80 so that `augur translate` is not broken by a deprecation of `UnknownSeq` in 1.81. When running `augur translate` with Biopython 1.81, the user will receive an error starting with `ERROR: Package BCBio.GFF not found!` and ending with `TypeError: object of type 'NoneType' has no len()`. [#1152][] (@corneliusroemer) [#1152]: https://github.com/nextstrain/augur/pull/1152 ## 21.0.0 (7 February 2023) ### Major Changes * measurements export: Supports exporting multiple thresholds per collection via the measurements config and the `--thresholds` option. This change is backwards compatible with previous uses of the `--threshold` option. However, due to the updates to the JSON schema, users will need to update to Auspice v2.43.0 for thresholds to be displayed properly in the measurements panel. [#1148][] (@joverlee521) ### Features * export v2: Add `--validation-mode={error,warn,skip}` option for more nuanced control of validation. The new "warn" mode performs validation and emits messages about potential problems, but it does not cause the export command to fail even if there are problems. [#1135][] (@tsibley) ### Bug Fixes * filter, frequencies, refine, parse: Properly handle invalid date errors and output the bad date. [#1140][] (@victorlin) * export, validate: Validation errors are now much more human-readable and actually pinpoint the problems. [#1134][] (@tsibley) [#1134]: https://github.com/nextstrain/augur/pull/1134 [#1135]: https://github.com/nextstrain/augur/pull/1135 [#1140]: https://github.com/nextstrain/augur/pull/1140 [#1148]: https://github.com/nextstrain/augur/pull/1148 ## 20.0.0 (20 January 2023) ### Major Changes * frequencies: Changes the logic for calculating the time points when frequencies are estimated to ensure that the user-provided "end date" is always included. This change in the behavior of the frequencies command fixes a bug where large intervals between time points (e.g., 3 months) could cause recent data to be omitted from frequency calculations. See the pull request for more details included the scientific implications of this bug. [#1121][] (@huddlej) [#1121]: https://github.com/nextstrain/augur/pull/1121 ## 19.3.0 (19 January 2023) ### Features * titers: Support parsing of thresholded values (e.g., "<80" or ">2560"). [#1118][] (@huddlej) * tree: Support bootstrapped trees generated with RAxML via user-provided `--tree-builder-args`. [#1127][] (@tsibley) ### Bug Fixes * utils: Serialize common numpy data types in `write_json`. [#1119][] (@victorlin) * filter: Standardize exit codes from internal error handling. [#931][] (@victorlin) * tree: Suppress the `Cannot specify --substitution-model unless using IQTree` warning when `--substitution-model` is left at its default. [#1127][] (@tsibley) * tree: Print the underlying error message when tree building fails. [#1127][] (@tsibley) * Previously, `numpy` and `scipy` were installed as dependencies of dependencies. Mark them as direct dependencies since they are used directly within Augur. [#1120][] (@victorlin) [#931]: https://github.com/nextstrain/augur/pull/931 [#1118]: https://github.com/nextstrain/augur/pull/1118 [#1119]: https://github.com/nextstrain/augur/pull/1119 [#1120]: https://github.com/nextstrain/augur/pull/1120 [#1127]: https://github.com/nextstrain/augur/pull/1127 ## 19.2.0 (19 December 2022) ### Features * titers: Allow users to specify a custom prefix for attributes in the JSON output (e.g., `cTiter` can be changed to `custom_prefix_cTiter`). [#1106][] (@huddlej) [#1106]: https://github.com/nextstrain/augur/pull/1106 ## 19.1.0 (14 December 2022) ### Features * io: Add `open_file` and `write_sequences` to the Python Pubic API. [#1114][] (@joverlee521) [#1114]: https://github.com/nextstrain/augur/pull/1114 ## 19.0.0 (13 December 2022) ### Major Changes * io: Only `read_metadata` and `read_sequences` are available as part of the Python Public API. Other Python API functions of the `augur.io` module are no longer directly available. This is a breaking change, although we suspect few users to be impacted. If you still need to use other imports in your scripts, they can be imported from the [Developer API](https://docs.nextstrain.org/projects/augur/en/stable/api/developer/index.html) but note that they are no longer part of the [Public API](https://docs.nextstrain.org/projects/augur/en/stable/api/public/index.html). [#1087][] (@victorlin) ### Bug Fixes * docs: Update the API documentation to reflect the latest state of things in the codebase. [#1087][] (@victorlin) * Fix support for Biopython version 1.80 which deprecated `Bio.Seq.Seq.ungap()`. [#1102][] (@victorlin) * export v2: Fixed a bug where colorings for zero values via `--colors` would not get applied to the exported Auspice JSON. [#1100][] (@joverlee521) * curate: Fixed a bug where metadata TSVs failed to parse if data within a column included comma separated values [#1110][] (@joverlee521) [#1087]: https://github.com/nextstrain/augur/pull/1087 [#1100]: https://github.com/nextstrain/augur/pull/1100 [#1102]: https://github.com/nextstrain/augur/pull/1102 [#1110]: https://github.com/nextstrain/augur/pull/1110 ## 18.2.0 (15 November 2022) ### Features * Add the curate subcommand with two sub-subcommands, passthru and normalize-strings. The curate subcommand is intended to be a suite of commands to help users with data curation prior to running Nextstrain analyses. We will continue to add more subcommands as we identify other common data curation tasks. Please see the [usage docs](https://docs.nextstrain.org/projects/augur/en/stable/usage/cli/curate) for details. [#1039][] (@joverlee521) [#1039]: https://github.com/nextstrain/augur/pull/1039 ## 18.1.2 (1 November 2022) ### Bug Fixes * traits: Fix trait inference when tips have missing values. [#1081][] (@huddlej) [#1081]: https://github.com/nextstrain/augur/pull/1081 ## 18.1.1 (1 November 2022) ### Bug Fixes * filter: Fixed a bug where `--group-by week` would fail when all samples in a chunk have been dropped due to ambiguous dates. [#1080][] (@victorlin) [#1080]: https://github.com/nextstrain/augur/pull/1080 ## 18.1.0 (26 October 2022) ### Features * filter: Add support to group by ISO week (`--group-by week`) during subsampling. [#1067][] (@victorlin) ### Bug Fixes * filter: Fixed unintended behavior in which grouping by `day` would "work" when used with `month` and/or `year`. Updated so it will be ignored. [#1070][] (@victorlin) * filter: Fixed unintended behavior in which grouping by `month` with ambiguous years would "work". Updated so date ambiguity is checked properly for all generated columns. [#1072][] (@victorlin) [#1067]: https://github.com/nextstrain/augur/pull/1067 [#1070]: https://github.com/nextstrain/augur/pull/1070 [#1072]: https://github.com/nextstrain/augur/pull/1072 ## 18.0.0 (21 September 2022) ### Major Changes * export: The `--node-data` option may now be given multiple times to provide additional `.json` files. Previously, subsequent occurrences of the option overrode prior occurrences. This is a **breaking change**, although we expect few usages to be impacted. Each occurrence of the option may still specify multiple files at a time. [#1010][] (@tsibley) ### Bug Fixes * refine: 17.1.0 updated TreeTime to version 0.9.2 and introduced the `refine` flag `--use-fft`. This makes previously costly marginal date inference cheaper. This update adjusts when `refine` runs marginal date inference during its iterative optimization. Without the `use-fft` flag, it will now behave as it did before 17.1.0 (marginal inference only during final iterations). With the `--use-fft` flag, marginal date inference will be used at every step during the iteration if refine is run with `--date-inference marginal` [#1034][]. (@rneher) * tree: When using IQtree as tre builder, `--nthreads` now sets the maximum number of threads (IQtree argument `-ntmax`). The actual number of threads to use can be specified by the user through the tree-builder-arg `-nt` which defaults to `-nt AUTO`, causing IQtree to automatically chose the best number of threads to use [#1042][] (@corneliusroemer) * Make cvxopt as a required dependency, since it is required for titer models to work [#1035][]. (@victorlin) * filter: Fix compatibility with Pandas 1.5.0 which could cause an unexpected `AttributeError` with an invalid `--query` given to `augur filter`. [#1050][] (@tsibley) * refine: Add `--verbosity` argument that is passed down to TreeTime to facilitate monitoring and debugging. [#1033][] (@anna-parker) * Improve handling of errors from TreeTime. [#1033][] (@anna-parker) [#1010]: https://github.com/nextstrain/augur/pull/1010 [#1033]: https://github.com/nextstrain/augur/pull/1033 [#1034]: https://github.com/nextstrain/augur/pull/1034 [#1035]: https://github.com/nextstrain/augur/pull/1035 [#1042]: https://github.com/nextstrain/augur/pull/1042 [#1050]: https://github.com/nextstrain/augur/pull/1050 ## 17.1.0 (19 August 2022) ### Features * refine: Upgrade TreeTime from 0.8.6 to >= 0.9.2 which enables a speedup of timetree inference in marginal mode due to the use of Fast Fourier Transforms [#1018][]. (@rneher and @anna-parker). Use the `refine` flag `--use-fft` to use this feature. ### Bug Fixes * refine, export v1: Use pandas.DataFrame.at instead of .loc for single values [#979][]. (@victorlin) * refine: Gracefully handle all exceptions from TreeTime [#1023][]. (@anna-parker) * refine: Document branch length units `treetime` expects [#1024][]. (@anna-parker) * dates: Raise an error when metadata to `get_numerical_dates()` is not a pandas DataFrame [#1026][]. (@victorlin) [#979]: https://github.com/nextstrain/augur/pull/979 [#1018]: https://github.com/nextstrain/augur/pull/1018 [#1023]: https://github.com/nextstrain/augur/pull/1023 [#1024]: https://github.com/nextstrain/augur/pull/1024 [#1026]: https://github.com/nextstrain/augur/pull/1026 ## 17.0.0 (9 August 2022) ### Major Changes * Moved the following modules to subpackages [#1002][]. (@joverlee521) These are technically breaking changes for the API, but they do not change the Augur CLI commands. * `import.py` -> `import_/__init__.py` * `import_beast.py` -> `import_/beast.py` * `measurements.py` -> `measurements/__init__.py` + `measurements/concat.py` + `measurements/export.py` * Move the following internal functions/classes [#1002][]. (@joverlee521) * `augur.add_default_command` -> `argparse_.add_default_command` * `utils.HideAsFalseAction` -> `argparse_.HideAsFalseAction` * Subcommands must include a `register_parser` function to add their own parser instead of a `register_arguments` function [#1002][]. (@joverlee521) * utils: Remove internal function `utils.read_metadata()` [#978][]. (@victorlin) * Use `io.read_metadata()` going forwards. * To switch to using metadata as a pandas DataFrame (recommended): * Iterate through strains: `metadata.items()` -> `metadata.iterrows()` * Check strain presence: `strain in metadata` -> `strain in metadata.index` * Check field presence: `field in metadata[strain]` -> `field in metadata.columns` * Get metadata for a strain: `metadata[strain]` -> `metadata.loc[strain]` * Get field for a strain: `metadata[strain][field]` -> `metadata.at[strain, field]` * To keep using metadata in a dictionary: ```py metadata = read_metadata(args.metadata) metadata.insert(0, "strain", metadata.index.values) columns = metadata.columns metadata = metadata.to_dict(orient="index") ``` ### Features * export: `--skip-validation` now also skips version compatibility checks [#902][]. (@corneliusroemer) * filter: Report names of duplicate strains found during metadata parsing [#1008][] (@huddlej) * translate: Add support for Nextclade gene map GFFs [#1017][] (@huddlej) ### Bug Fixes * filter: Rename internal force inclusion filtering functions [#1006][] (@victorlin) [#902]: https://github.com/nextstrain/augur/pull/902 [#978]: https://github.com/nextstrain/augur/pull/978 [#1002]: https://github.com/nextstrain/augur/pull/1002 [#1006]: https://github.com/nextstrain/augur/pull/1006 [#1008]: https://github.com/nextstrain/augur/pull/1008 [#1017]: https://github.com/nextstrain/augur/pull/1017 ## 16.0.3 (6 July 2022) ### Bug Fixes * filter: Move `register_arguments` to the top of the module for better readability [#995][]. (@victorlin) * filter: Fix a regression [introduced in 16.0.2](https://github.com/nextstrain/augur/commit/4859b5d70e77cc9a0bb99e741fefb29952058b71) that caused grouping with subsampled max sequences and force-included strains to fail in a data-specific way [#1000][]. (@huddlej) [#995]: https://github.com/nextstrain/augur/pull/995 [#1000]: https://github.com/nextstrain/augur/pull/1000 ## 16.0.2 (30 June 2022) ### Bug Fixes * The entropy panel was unavailable if mutations were not translated [#881][]. This has been fixed by creating an additional `annotations` block in `augur ancestral` containing (nucleotide) genome annotations in the node-data [#961][] (@jameshadfield) * ancestral: WARNINGs to stdout have been updated to print to stderr [#961][] (@jameshadfield) * filter: Explicitly drop date/year/month columns from metadata during grouping. [#967][] (@victorlin) * This fixes a bug [#871][] where `augur filter` would crash with a cryptic `ValueError` if `year` and/or `month` is a custom column in the input metadata and also included in `--group-by`. * filter: Fix duplicates that may appear in metadata when using `--include`/`--include-where` with subsampling [#986][] (@victorlin) [#881]: https://github.com/nextstrain/augur/issues/881 [#961]: https://github.com/nextstrain/augur/pull/961 [#967]: https://github.com/nextstrain/augur/pull/967 [#871]: https://github.com/nextstrain/augur/issues/871 [#986]: https://github.com/nextstrain/augur/pull/986 ## 16.0.1 (21 June 2022) ### Bug Fixes * filter: Handle errors from `filter_by_query` [#942][] (@victorlin) * translate: output nuc annotation when reading from gff3 gene map [#976][] (@corneliusroemer) * CI: Remove step for selecting PyPI instance [#974][] (@victorlin) * CI: Add token to use GitHub CLI [#958][] (@victorlin) [#942]: https://github.com/nextstrain/augur/pull/942 [#976]: https://github.com/nextstrain/augur/pull/976 [#974]: https://github.com/nextstrain/augur/pull/974 [#958]: https://github.com/nextstrain/augur/pull/958 ## 16.0.0 (16 June 2022) ### Major Changes * filter: Error when any group-by column is not found [#933][] (@victorlin) * Check your workflows for any new errors that may arise from this. * parse: Error on duplicates instead of silently passing [#918][] (@victorlin) * Check your workflows for any new errors that may arise from this. * utils: Remove `utils.myopen()` [#926][] (@victorlin) * Use `io.open_file()` going forwards. * Moved the following internal functions [#929][], [#923][] (@victorlin): * `utils.read_vcf` -> `io.read_vcf` * `utils.run_shell_command` -> `io.run_shell_command` * `utils.shquote` -> `io.shquote` * `utils.ambiguous_date_to_date_range` -> `dates.ambiguous_date_to_date_range` * `utils.is_date_ambiguous` -> `dates.is_date_ambiguous` * `utils.get_numerical_date_from_value` -> `dates.get_numerical_date_from_value` * `utils.get_numerical_dates` -> `dates.get_numerical_dates` * Drop support for dict type as the first parameter [#934][] * `filter.write_vcf` -> `io.write_vcf` ### Features * Add the measurements subcommand with two sub-subcommands, export and concat [#879][] (@joverlee521) * filter: Report min and max date separately [#930][] (@victorlin) * export v2: Allow the color scale type to be temporal [#969][] (@jameshadfield) * Handle `FileNotFoundError` and unexpected exceptions gracefully [#914][] (@victorlin) ### Bug Fixes * filter: Properly handle error on duplicates [#918][] (@victorlin) * filter: Reorganize Cram test files [#943][] (@victorlin) * filter: Reword comment on vcftools [#924][] (@victorlin) * io: Split io.py into smaller files under new io/ [#949][] (@victorlin) * io: Add tests for `io.open_file()` [#926][] (@victorlin) * Move AugurError to new errors.py, replace RuntimeError [#921][] (@victorlin) * Remove internal usage of `utils.read_metadata()` [#934][], [#972][] (@victorlin) * schemas: Add missing display_default properties for Auspice config v2 [#916][] (@tsibley) * CI: Split codecov into separate job, combine coverage of all matrix jobs [#968][] (@tsibley) * CI: Temporarily disable failing test [#962][] (@victorlin) * CI: pip install without editable mode [#956][] (@victorlin) * CI: Include functional tests in code coverage [#899][] (@huddlej) * CI: Move --quiet flag to accommodate snakemake=7.7.0 behavior [#927][] (@victorlin) * CI: Move docker rebuild step to release workflow [#912][] (@victorlin) * Update release process [#913][] (@victorlin) [#968]: https://github.com/nextstrain/augur/pull/968 [#949]: https://github.com/nextstrain/augur/pull/949 [#879]: https://github.com/nextstrain/augur/pull/879 [#962]: https://github.com/nextstrain/augur/pull/962 [#956]: https://github.com/nextstrain/augur/pull/956 [#921]: https://github.com/nextstrain/augur/pull/921 [#943]: https://github.com/nextstrain/augur/pull/943 [#929]: https://github.com/nextstrain/augur/pull/929 [#934]: https://github.com/nextstrain/augur/pull/934 [#930]: https://github.com/nextstrain/augur/pull/930 [#926]: https://github.com/nextstrain/augur/pull/926 [#933]: https://github.com/nextstrain/augur/pull/933 [#899]: https://github.com/nextstrain/augur/pull/899 [#923]: https://github.com/nextstrain/augur/pull/923 [#914]: https://github.com/nextstrain/augur/pull/914 [#913]: https://github.com/nextstrain/augur/pull/913 [#927]: https://github.com/nextstrain/augur/pull/927 [#924]: https://github.com/nextstrain/augur/pull/924 [#916]: https://github.com/nextstrain/augur/pull/916 [#918]: https://github.com/nextstrain/augur/pull/918 [#912]: https://github.com/nextstrain/augur/pull/912 [#969]: https://github.com/nextstrain/augur/pull/969 [#972]: https://github.com/nextstrain/augur/pull/972 ## 15.0.2 (5 May 2022) ### Bug Fixes * docs: Fix API documentation rendering and add page for `io` module [#896][] (@joverlee521) * CI: Use GitHub Actions for release process [#904][] (@victorlin) * utils: Fix branch length annotations in `json_to_tree` function [#908][] (@huddlej) * export v2: Use io.read_metadata during export, fixing a bug caused when the user's input metadata does not have any valid strain id columns [#909][] (@huddlej) * CI: Call new GitHub Actions workflow to rebuild images [#910][] (@victorlin) [#910]: https://github.com/nextstrain/augur/pull/910 [#909]: https://github.com/nextstrain/augur/pull/909 [#908]: https://github.com/nextstrain/augur/pull/908 [#904]: https://github.com/nextstrain/augur/pull/904 [#896]: https://github.com/nextstrain/augur/pull/896 ## 15.0.1 (25 April 2022) ### Bug Fixes * traits: Fix crash when inferring traits with a single value. [#891][] (@huddlej) * index: Properly handle missing inputs. [#900][] (@huddlej) * index: Use standard UNIX-style line endings for output. [#900][] (@huddlej) [#891]: https://github.com/nextstrain/augur/pull/891 [#900]: https://github.com/nextstrain/augur/pull/900 ## 15.0.0 (15 April 2022) ### Major Changes * export: Move extensions block to meta [#888][] (@corneliusroemer) Note: this is technically a breaking change, but the misplaced extensions block was added in version 14.1.0 and intended for internal use by Nextclade. We don't expect any users to be impacted by this. ### Features * filter: Support relative dates for `--min-date` and `--max-date` [#740][] (@benjaminotter, @victorlin) * frequencies: Support relative dates for `--min-date` and `--max-date` [#890][] (@victorlin, @huddlej) * docs: Add page describing how to use your own tree builder [#884][] (@jameshadfield, @joverlee521) ### Bug Fixes * parse: Fix `--fix-dates` [#878][] (@huddlej) * tree: Fix internal comment on excluded sites [#880][] (@jameshadfield) [#888]: https://github.com/nextstrain/augur/pull/888 [#740]: https://github.com/nextstrain/augur/pull/740 [#890]: https://github.com/nextstrain/augur/pull/890 [#884]: https://github.com/nextstrain/augur/pull/884 [#878]: https://github.com/nextstrain/augur/pull/878 [#880]: https://github.com/nextstrain/augur/pull/880 ## 14.1.0 (31 March 2022) ### Features * schemas: Extend export v2 schema to support an array of trees [#851][] (@tsibley) * schemas: Add JSON schemas for our root-sequence and tip-frequencies sidecars [#852][] (@tsibley) * schemas: Add JSON schema for measurements sidecar [#859][] (@joverlee521) * filter: Send warnings to stderr to be consistent with other warnings [#862][] (@victorlin) * export: Allow an extensions block in auspice config & dataset JSONs [#865][] (@jameshadfield) * export: Allow skipping of input/output schema validation [#865][] (@jameshadfield) * export: Order keys in dataset for easier reading [#868][] (@jameshadfield) ### Bug Fixes * parse: Fix typo in internal variable name [#850][] (@emmahodcroft) [#850]: https://github.com/nextstrain/augur/pull/850 [#851]: https://github.com/nextstrain/augur/pull/851 [#852]: https://github.com/nextstrain/augur/pull/852 [#859]: https://github.com/nextstrain/augur/pull/859 [#862]: https://github.com/nextstrain/augur/pull/862 [#865]: https://github.com/nextstrain/augur/pull/865 [#868]: https://github.com/nextstrain/augur/pull/868 ## 14.0.0 (8 February 2022) ### Major Changes * Drop support for Python 3.6, add support for 3.9 and 3.10 [#822][] (@victorlin) ### Features * refine: Enable bootstrap support by passing confidence values through to Auspice JSONs from `augur refine` node data JSONs [#839][] (@huddlej) * tree: Allow users to override default tree builder arguments with a new `--override-default-args` flag [#839][] (@huddlej) * clades: Allow descendant clades to be defined by explicitly inheriting from ancestral clade names [#846][] (@corneliusroemer) ### Bug Fixes * tree: Fix segmentation fault that can occur when user-provided tree builder args conflict hardcoded defaults for IQ-TREE's. The new `--override-default-args` flag allows users to override the defaults that conflict with their values. [#839][] (@huddlej) * filter/utils: fix year-only and numeric date handling [#841][] (@victorlin) * CI: test earliest supported Biopython versions in matrix, remove redundant installs [#843][] (@victorlin) [#822]: https://github.com/nextstrain/augur/pull/822 [#841]: https://github.com/nextstrain/augur/pull/841 [#843]: https://github.com/nextstrain/augur/pull/843 [#846]: https://github.com/nextstrain/augur/pull/846 [#839]: https://github.com/nextstrain/augur/pull/839 ## 13.1.2 (28 January 2022) ### Features ### Bug Fixes * filter: Set default filter priority to negative infinity instead of 0. [#835][] (@huddlej) * filter: Cast strains to list when subsetting metadata to prevent pandas FutureWarning. [#833][] (@victorlin) * export v2: Allow periods (.) in accession numbers. [#832][] (@tsibley) [#835]: https://github.com/nextstrain/augur/pull/835 [#833]: https://github.com/nextstrain/augur/pull/833 [#832]: https://github.com/nextstrain/augur/pull/832 ## 13.1.1 (21 January 2022) ### Bug Fixes * dependencies: Relax upper bounds on development dependencies. [#821][] and [#830][] (@victorlin, @huddlej) * refine: Inform users when their requested root sequence is not present in the alignment. [#816][] (@corneliusroemer) * utils: Fix crash with `read_metadata` when numexpr is installed. [#826][] (@victorlin) [#816]: https://github.com/nextstrain/augur/pull/816 [#821]: https://github.com/nextstrain/augur/pull/821 [#826]: https://github.com/nextstrain/augur/pull/826 [#830]: https://github.com/nextstrain/augur/pull/830 ## 13.1.0 (10 December 2021) ### Features * schemas: Add "$id" key to Auspice config schemas so we have a way of referring to these. [#806][] (@tsibley) ### Bug Fixes * filter: Fix groupby with incomplete dates. [#808][] (@victorlin) [#806]: https://github.com/nextstrain/augur/pull/806 [#808]: https://github.com/nextstrain/augur/pull/808 ## 13.0.4 (8 December 2021) ### Bug Fixes * dependencies: Replace deprecated mutable sequence interface for BioPython. [#788][] (@Carlosbogo) * dependencies: Fix backward compatibility with BioPython. [#801][] (@huddlej) * data: Add latitude and longitude details for "Reunion". [#791][] (@corneliusroemer) * filter: Use pandas functions to determine subsample groups. [#794][] and [#797][] (@victorlin) * filter: Add clarity to help message and output of probabilistic sampling. [#792][] (@victorlin) [#788]: https://github.com/nextstrain/augur/pull/788 [#791]: https://github.com/nextstrain/augur/pull/791 [#792]: https://github.com/nextstrain/augur/pull/792 [#794]: https://github.com/nextstrain/augur/pull/794 [#797]: https://github.com/nextstrain/augur/pull/797 [#801]: https://github.com/nextstrain/augur/pull/801 ## 13.0.3 (19 November 2021) ### Bug Fixes * tree: Handle compressed alignment when excluding sites. [#786][] (@huddlej) * docs: Fix typos ([ce0834c][]) and clarify exclude sites inputs ([5ad1574][]). (@corneliusroemer) [#786]: https://github.com/nextstrain/augur/pull/786 [ce0834c]: https://github.com/nextstrain/augur/commit/ce0834c476abc9ee99785fa930608218b7d78990 [5ad1574]: https://github.com/nextstrain/augur/commit/5ad157485015623883c6b637d247459f906b63cb ## 13.0.2 (12 October 2021) ### Bug Fixes * dependencies: Support latest versions of BioPython. [#777][] (@huddlej) * tree: Allow users to specify arbitrary IQ-TREE models. [#776][] (@huddlej) [#776]: https://github.com/nextstrain/augur/pull/776 [#777]: https://github.com/nextstrain/augur/pull/777 ## 13.0.1 (1 October 2021) ### Bug Fixes * docs: Fix broken link to latitude/longitude documentation. [#766][] (@victorlin) * filter: Fix reproducibility of subsampling by using the user-defined random seed in all random function calls and by ordering strain sets as lists prior to adding strains to group-by priority queues. [#772][] (@huddlej) [#766]: https://github.com/nextstrain/augur/pull/766 [#772]: https://github.com/nextstrain/augur/pull/772 ## 13.0.0 (17 August 2021) ### Major Changes * filter: Skip metadata records with ambiguous month information in the `date` column when grouping by month instead of randomly generating month values for those records. This change alters the behavior of the `filter` command for metadata with ambiguous month values. For these data, consider using `--group-by year` instead of `--group-by year month`. [#761][] (@huddlej) ### Features * filter: When grouping by year or month, report the number of strains skipped due to ambiguous year and month both in the summary report at the end of filtering and in the `--output-log` contents [#761][] (@huddlej) [#761]: https://github.com/nextstrain/augur/pull/761 ## 12.1.1 (13 August 2021) ### Bug Fixes * filter: Fix parsing of missing data in metadata [#758][] (@huddlej) * filter: Fix probabilistic sampling with small values [#759][] (@huddlej) [#758]: https://github.com/nextstrain/augur/pull/758 [#759]: https://github.com/nextstrain/augur/pull/759 ## 12.1.0 (12 August 2021) ### Features * export: Add support for custom legend and color scale specifications in Auspice config files [#727][] (@jameshadfield) * utils: Add support for compressed strain name files (e.g., "include.txt.gz") [#730][] (@benjaminotter) * filter: Rewrite internal logic to use pandas DataFrames ([#743][]), define filters and subsampling logic as individual functions ([#745][] and [#746][]), and iterate through chunks of metadata instead of loading all records into memory at once ([#750][]) (@tsibley, @huddlej) ### Bug Fixes * distance: Change numeric type of distance output to float [#729][] (@benjaminotter) * filter: Disable probabilistic sampling when users provide `--sequences-per-group` [#737][] (@benjaminotter) * export: Provide correct missing file error messages for metadata and node data JSON inputs [#752][] (@benjaminotter) [#727]: https://github.com/nextstrain/augur/pull/727 [#729]: https://github.com/nextstrain/augur/pull/729 [#730]: https://github.com/nextstrain/augur/pull/730 [#737]: https://github.com/nextstrain/augur/pull/737 [#743]: https://github.com/nextstrain/augur/pull/743 [#745]: https://github.com/nextstrain/augur/pull/745 [#746]: https://github.com/nextstrain/augur/pull/746 [#750]: https://github.com/nextstrain/augur/pull/750 [#752]: https://github.com/nextstrain/augur/pull/752 ## 12.0.0 (13 April 2021) ### Major Changes * filter: Date bounds (`--min-date` and `--max-date`) are now inclusive instead of exclusive such that records matching the given dates will pass date filters [#708][] (@benjaminotter) ### Bug Fixes * refine: Recommend an alternate action when skyline optimization fails [#712][] (@huddlej) ### Features * distance: Count insertion/deletion events once in pairwise distances [#698][] (@huddlej, @benjaminotter) * distance: Optionally ignore specific list of characters defined in a distance map's top-level `ignored_characters` list [#707][] (@benjaminotter) * filter: Allow `--subsample-max-sequences` without `--group-by` [#710][] (@benjaminotter) * tree: Prefer `iqtree2` binary over `iqtree` when possible [#711][] (@benjaminotter) [#698]: https://github.com/nextstrain/augur/pull/698 [#707]: https://github.com/nextstrain/augur/pull/707 [#708]: https://github.com/nextstrain/augur/pull/708 [#710]: https://github.com/nextstrain/augur/pull/710 [#711]: https://github.com/nextstrain/augur/pull/711 [#712]: https://github.com/nextstrain/augur/pull/712 ## 11.3.0 (19 March 2021) ### Bug Fixes * filter: Clarify how the `--priority` input affects subsampling in the command line help documentation [#695][] * tests: Clean up outputs created by tests [#703][], ignore log files [#701][], and remove unnecessary Conda environment file [#702][] ### Features * io: Add new `io` module with `open_file`, `read_sequences`, and `write_sequences` functions that support compressed inputs and outputs [#652][] * parse, index, filter, mask: Add support for compressed inputs/outputs [#652][] * export v2: Add optional `data_provenance` field to auspice JSON output for better provenance reporting in Auspice [#705][] [#652]: https://github.com/nextstrain/augur/pull/652 [#695]: https://github.com/nextstrain/augur/pull/695 [#701]: https://github.com/nextstrain/augur/pull/701 [#702]: https://github.com/nextstrain/augur/pull/702 [#703]: https://github.com/nextstrain/augur/pull/703 [#705]: https://github.com/nextstrain/augur/pull/705 ## 11.2.0 (8 March 2021) ### Bug Fixes * ancestral: Mask positions that are ambiguous in all tip sequences before inferring ancestral sequence states, to avoid assigning arbitrary ancestral values based on rounding errors [#682][] * titers: Add missing `kwargs` attribute to `TiterCollection` class [#690][] ### Documentation * Update API documentation to include newer Python modules and the `index` subcommand [#687][] * Remove Zika and TB tutorials in favor of copies in docs.nextstrain.org [#689][] ### Features * filter: Enable filtering by metadata only such that sequence inputs/outputs are optional and metadata/strain list outputs are now possible [#679][] * filter: Enable extraction of sequences from multiple lists of strains with a new `--exclude-all` flag and support for multiple inputs to the `--include` argument [#679][] [#679]: https://github.com/nextstrain/augur/pull/679 [#682]: https://github.com/nextstrain/augur/pull/682 [#687]: https://github.com/nextstrain/augur/pull/687 [#689]: https://github.com/nextstrain/augur/pull/689 [#690]: https://github.com/nextstrain/augur/pull/690 ## 11.1.2 (16 February 2021) ### Bug Fixes * index: Remove call to deprecated BioPython SeqIO.close method [#684][] [#684]: https://github.com/nextstrain/augur/pull/684 ## 11.1.1 (16 February 2021) ### Bug Fixes * filter: Retry probabilistic subsampling when it doesn't select any samples [#676][] * titers: Skip infinite log titer values caused by zero-valued raw titers [#677][] * setup: Include license file with distribution artifacts instead of Python installation root [#678][] [#676]: https://github.com/nextstrain/augur/pull/676 [#677]: https://github.com/nextstrain/augur/pull/677 [#678]: https://github.com/nextstrain/augur/pull/678 ## 11.1.0 (12 February 2021) ### Bug Fixes * align/utils: Improve external command errors [#638][] * filter: Fix parsing of priorities files to allow spaces in sequence IDs [#668][] * utils: Ensure columns `strain` and `name` in metadata get parsed as strings [#669][] ### Features * index/filter: Add new `index` subcommand and optional `--sequence-index` argument for `filter` command to enable filtering without inspecting sequences [#651][] * titers: Bump supported cvxopt version to latest 1.* release [#671][] [#638]: https://github.com/nextstrain/augur/pull/638 [#651]: https://github.com/nextstrain/augur/pull/651 [#668]: https://github.com/nextstrain/augur/pull/668 [#669]: https://github.com/nextstrain/augur/pull/669 [#671]: https://github.com/nextstrain/augur/pull/671 ## 11.0.0 (22 January 2021) ### Major Changes * filter: Use probabilistic sampling by default when requesting a maximum number of sequences to subsample with `--subsample-max-sequences`. Adds `--no-probabilistic-sampling` flag to disable this default behavior and prevent users from requesting fewer maximum sequences than there are subsampling groups. [#659][] [#659]: https://github.com/nextstrain/augur/pull/659 ## 10.3.0 (14 January 2021) ### Bug Fixes * scripts: Fix typo in `verify_meta_json.py` [#656][] (@felixonmars) * CI: Use the expected Python version in conda environments [#658][] * CI: Minimize codecov feedback [#661][] ### Features * frequencies: Add `--pivot-interval-units` argument with support for weekly pivots [#660][] * frequencies: Add support for ISO dates for `--min-date` and `--max-date` arguments [#660][] [#656]: https://github.com/nextstrain/augur/pull/656 [#658]: https://github.com/nextstrain/augur/pull/658 [#660]: https://github.com/nextstrain/augur/pull/660 [#661]: https://github.com/nextstrain/augur/pull/661 ## 10.2.0 (1 January 2021) ### Features * filter: Add `--probablistic-sampling` flag to allow subsampling with `--subsample-max-sequences` when the number of groups exceeds the requested number of samples [#629][] * scripts: Add script to identify emerging clades from existing Nextstrain build JSONs [#653][] * docs: Add instructions to update conda installations prior to installing Augur [#655][] [#629]: https://github.com/nextstrain/augur/pull/629 [#653]: https://github.com/nextstrain/augur/pull/653 [#655]: https://github.com/nextstrain/augur/pull/655 ## 10.1.1 (16 November 2020) ### Bug Fixes * dependencies: Require the most recent minor versions of TreeTime (0.8.X) to fix numpy matrix errors [#633][] [#633]: https://github.com/nextstrain/augur/pull/633 ## 10.1.0 (13 November 2020) ### Features * docs: Migrate non-reference documentation to docs.nextstrain.org [#620][] * filter: Add `--exclude-ambiguous-dates-by` flag to enable exclusion of samples with ambiguous dates [#623][] and [#631][] [#620]: https://github.com/nextstrain/augur/pull/620 [#623]: https://github.com/nextstrain/augur/pull/623 [#631]: https://github.com/nextstrain/augur/pull/631 ## 10.0.4 (6 November 2020) ### Bug Fixes * tree: Use a more generic approach to escape special characters from alignment sequence names prior to running IQ-TREE [#625][] * filter: Reduce memory usage by not reading sequences into memory [#627][] [#625]: https://github.com/nextstrain/augur/pull/625 [#627]: https://github.com/nextstrain/augur/pull/627 ## 10.0.3 (23 October 2020) ### Bug Fixes * refine: Report divergence by number of mutations as an integer instead of a floating point value [#618][] * validate: Allow internal nodes with a single child and do not allow duplicate node names [#621][] [#618]: https://github.com/nextstrain/augur/pull/618 [#621]: https://github.com/nextstrain/augur/pull/621 ## 10.0.2 (8 September 2020) ### Bug Fixes * align: Remove references to BioPython's deprecated `Alphabet` attributes [#615][] * Pin BioPython dependency to a max supported version to prevent breaking changes to augur in the future [#615][] [#615]: https://github.com/nextstrain/augur/pull/615 ## 10.0.1 (8 September 2020) ### Bug Fixes * ancestral: Clarify default values for inference of ambiguous bases [#613][] [#613]: https://github.com/nextstrain/augur/pull/613 ## 10.0.0 (17 August 2020) ### Major Changes * Remove Snakemake as a dependency of the augur Python package [#557][] * Updated documentation to reflect external Snakemake dependency [#600][] and Snakemake's required `--cores` argument [#599][] * utils: `read_colors` refactor [#588][] * raises an exception when the requested color file is missing instead of printing a warning to stdout * splits out logic to parse colors file into separate classes (`util_support/color_parser.py` and `util_support/color_parser_line.py`) with unit tests * utils: `read_metadata` interface improvements * raises exceptions when 1) input file is missing or unreadable or 2) required columns (`strain` or `name`) are missing instead of failing silently [#584][] * automatically detects delimiter in metadata file instead of assuming delimiter based on filename extension [#587][] * utils: `read_node_data` interface improvements [#595][], [#605][] * exits with a nonzero code when node data node names don't match tree nodes and when the input tree cannot be loaded * refactors logic to read node data into separate classes with unit tests ### Bug Fixes * ancestral: Fix docstring for `collect_mutations_and_sequences` [4c474a9][] * parse: Fix date parsing bug caused by a change in the API for `parse_time_string` in pandas 1.1.0 [#601][] * refine: Enable divergence unit scaling without timetree [e9b3eec][] * tree: Use IQ-TREE's `-nt AUTO` mode when users request more threads than there are input sequences, avoiding an IQ-TREE error [#598][] ### Features * docs: Document support for installation from Bioconda [#604][] * filter: Add `--subsample-max-sequences` argument to limit the maximum number of sequences to be included in subsampled output [#593][] * mask: Add `--mask-invalid` flag to mask invalid nucleotides from FASTA files [#592][] [#557]: https://github.com/nextstrain/augur/pull/557 [#584]: https://github.com/nextstrain/augur/pull/584 [#587]: https://github.com/nextstrain/augur/pull/587 [#588]: https://github.com/nextstrain/augur/pull/588 [#592]: https://github.com/nextstrain/augur/pull/592 [#593]: https://github.com/nextstrain/augur/pull/593 [#595]: https://github.com/nextstrain/augur/pull/595 [#598]: https://github.com/nextstrain/augur/pull/598 [#599]: https://github.com/nextstrain/augur/pull/599 [#600]: https://github.com/nextstrain/augur/pull/600 [#601]: https://github.com/nextstrain/augur/pull/601 [#604]: https://github.com/nextstrain/augur/pull/604 [#605]: https://github.com/nextstrain/augur/pull/605 [e9b3eec]: https://github.com/nextstrain/augur/commit/e9b3eec670b9603874e195cc1ccd4f3c1aeef5dd [4c474a9]: https://github.com/nextstrain/augur/commit/4c474a96232e9cc333e3fc4c0971336a090b703c ## 9.0.0 (29 June 2020) ### Major Changes * align: The API to the `read_sequences` function now returns a list of sequences instead of a dictionary [#536][] ### Bug Fixes * align: Prevent duplicate strains warning when using `--reference-name` [#536][] * docs: Sync and deduplicate installation documentation from README to main docs [#578][] * export: Flexibly disambiguate multiple publications by the same author [#581][] * frequencies: Avoid interpolation of a single data point during frequency estimation with sparse data [#569][] * parse: Actually remove commas during prettify when this behavior is requested [#573][] * tests: Always use the local helper script (`bin/augur`) to run tests instead of any globally installed augur executables [#527][] * tree: Keep log files after trees are built [#572][] * utils: Do not attempt to parse dates with only ambiguous months (e.g., 2020-XX-01) [#532][] * utils: Parse `name` column of metadata as a data field instead of a pandas DataFrame attribute [#564][] ### Features * docs: Updates description of how missing data are handled by `augur traits` * filter: Add support for ISO 8601 dates (YYYY-MM-DD) for `--min-date` and `--max-date` [#568][] * tests: Add tests for utilities (ambiguous date parsing [#532][] and `run_shell_command` [#577][]), parse [#573][], and translate [#546][] * tree: Allow VCF input without an `--exclude-sites` argument [#565][] [#527]: https://github.com/nextstrain/augur/pull/527 [#532]: https://github.com/nextstrain/augur/pull/532 [#536]: https://github.com/nextstrain/augur/pull/536 [#546]: https://github.com/nextstrain/augur/pull/546 [#564]: https://github.com/nextstrain/augur/pull/564 [#565]: https://github.com/nextstrain/augur/pull/565 [#568]: https://github.com/nextstrain/augur/pull/568 [#569]: https://github.com/nextstrain/augur/pull/569 [#572]: https://github.com/nextstrain/augur/pull/572 [#573]: https://github.com/nextstrain/augur/pull/573 [#577]: https://github.com/nextstrain/augur/pull/577 [#578]: https://github.com/nextstrain/augur/pull/578 [#581]: https://github.com/nextstrain/augur/pull/581 ## 8.0.0 (8 June 2020) ### Major Changes * utils: Add a consolidated generic `load_mask_sites` function and specific `read_mask_file` and `read_bed_file` functions for reading masking sites from files. Changes the Python API by moving mask-loading functionality out of augur mask and tree into utils [#514][] and [#550][] * mask: Parse BED files as zero-indexed, half-open intervals [#512][] ### Bug Fixes * traits: Export mugration models to the same output directory as traits JSON [#544][] * Explicitly open files with UTF-8 file encoding [#499][], [#503][], and [#560][] * refine: Only request confidence intervals from TreeTime when no clock rate is provided [#548][] * refine: Catch failed skyline optimization [#556][] ### Features * align: Report insertions stripped during alignment [#449][] * Require minimum pandas version of 1.0.0 [#488][] * parse: Reduce memory use and clarify code with standard Python idioms [#496][] * mask: Allow masking of specific sites passed by the user with `--mask-sites` and masking of a fixed number of sites from the beginning or end of each sequence with `--mask-from-beginning` and `--mask-from-end` [#512][] * clades, import: Use `defaultdict` to simplify code [#533][] * tests: Add initial functional tests of the augur command line interface using Cram [#542][] * refine: Add a `--seed` argument to set the random seed for more reproducible outputs across runs [#542][] * ancestral, refine, and traits: Print the version of TreeTime being used for these commands [#552][] * filter: Add support for flexible pandas-style queries with new `--query` argument [#555][] * export: Allow display defaults for transmission lines [#561][] [#449]: https://github.com/nextstrain/augur/pull/449 [#488]: https://github.com/nextstrain/augur/pull/488 [#496]: https://github.com/nextstrain/augur/pull/496 [#499]: https://github.com/nextstrain/augur/pull/499 [#503]: https://github.com/nextstrain/augur/pull/503 [#512]: https://github.com/nextstrain/augur/pull/512 [#514]: https://github.com/nextstrain/augur/pull/514 [#533]: https://github.com/nextstrain/augur/pull/533 [#542]: https://github.com/nextstrain/augur/pull/542 [#544]: https://github.com/nextstrain/augur/pull/544 [#548]: https://github.com/nextstrain/augur/pull/548 [#550]: https://github.com/nextstrain/augur/pull/550 [#552]: https://github.com/nextstrain/augur/pull/552 [#555]: https://github.com/nextstrain/augur/pull/555 [#556]: https://github.com/nextstrain/augur/pull/556 [#560]: https://github.com/nextstrain/augur/pull/560 [#561]: https://github.com/nextstrain/augur/pull/561 ## 7.0.2 (7 April 2020) ### Bug Fixes * filter: Fix regression introduced in 7.0.0 which caused an error to be raised if a priorities file didn't include every sequence. Sequences which are not explicitly listed will once again default to a priority of 0. [#530][] [#530]: https://github.com/nextstrain/augur/pull/530 ## 7.0.1 (7 April 2020) ### Bug Fixes * Fix typo with Python classifiers in setup.py ## 7.0.0 (7 April 2020) ### Major Changes * Drop support for Python 3.4 and 3.5 [#482][] * Drop support for `--output` flag in augur ancestral, clades, sequence-traits, traits, and translate in favor of `--output-node-data` flag [#529][] ### Features * improve testing by * adding a simple shell script to run tests and improving pytest configuration and output [#463][] * adding code coverage reports ([#486][], [#491][]) and integration with codecov.io [#508][] * adding unit tests for align ([#477][]), filter ([#478][], [#479][], [#487][]), utils ([#501][]) * align: reverse complement sequences when necessary using mafft’s autodirection flag [#467][] * align: speed up replacement of gaps with “ambiguous” bases [#474][] * mask: add support for FASTA input files [#493][] * traits: bump TreeTime version to 0.7.4 and increase maximum number of unique traits allowed from 180 to 300 [#495][] ### Bug Fixes * align: enable filling gaps in input sequences even if no reference is provided instead of throwing an exception [#466][] * align: detect duplicate sequences by comparing sequence objects instead of (often truncated) string representations of those objects [#468][] * import_beast: use raw strings for regular expressions to avoid syntax errors in future versions of Python [#469][] * scripts: update exception syntax to new style [#484][] * filter: fail loudly when a given priority file is invalid and exit instead of just printing an error [#487][] ### Documentation * README: document need for brew tap prior to brew install [#471][] * DEV_DOCS: add a proper section on how to write and run tests [#481][] * README: improve discoverability of core documentation with RTD badge [#490][] [#463]: https://github.com/nextstrain/augur/pull/463/ [#466]: https://github.com/nextstrain/augur/pull/466 [#467]: https://github.com/nextstrain/augur/pull/467 [#468]: https://github.com/nextstrain/augur/pull/468 [#469]: https://github.com/nextstrain/augur/pull/469 [#471]: https://github.com/nextstrain/augur/pull/471 [#474]: https://github.com/nextstrain/augur/pull/474 [#477]: https://github.com/nextstrain/augur/pull/477 [#478]: https://github.com/nextstrain/augur/pull/478 [#479]: https://github.com/nextstrain/augur/pull/479 [#481]: https://github.com/nextstrain/augur/pull/481 [#482]: https://github.com/nextstrain/augur/pull/482 [#484]: https://github.com/nextstrain/augur/pull/484 [#486]: https://github.com/nextstrain/augur/pull/486 [#487]: https://github.com/nextstrain/augur/pull/487 [#490]: https://github.com/nextstrain/augur/pull/490 [#491]: https://github.com/nextstrain/augur/pull/491 [#493]: https://github.com/nextstrain/augur/pull/493 [#495]: https://github.com/nextstrain/augur/pull/495 [#501]: https://github.com/nextstrain/augur/pull/501 [#508]: https://github.com/nextstrain/augur/pull/508 [#529]: https://github.com/nextstrain/augur/pull/529 ## 6.4.3 (25 March 2020) ### Bug Fixes * align: Remove reference sequence from alignments even when no gaps exist in input sequences relative to the reference. Thank you @danielsoneg! [#456][] ### Documentation * Reorganize README, improve findability of documentation, and add separate dev docs. [#461][] [#456]: https://github.com/nextstrain/augur/pull/456 [#461]: https://github.com/nextstrain/augur/pull/461 ## 6.4.2 (17 March 2020) ### Bug Fixes * Require Snakemake less than 5.11 to avoid a breaking change. The `--cores` argument is now required by 5.11, which will affect many existing augur-based workflows. Reported upstream as [snakemake/snakemake#283](https://github.com/snakemake/snakemake/issues/283). * align: Run mafft with the `--nomemsave` option. This makes alignments of sequences over 10k in length run much, much faster in the general case and shouldn't cause issues for most modern hardware. We may end up needing to add an off-switch for this mode if it causes issues for other users of augur, but the hope is that it will make things just magically run faster for most folks! There is likely more tuning that could be done with mafft, but this is a huge improvement in our testing. [#458][] * align: Ignore blank lines in `--include` files. Thanks @CameronDevine! [#451][] * align: Properly quote filenames when invoking mafft. Thanks @CameronDevine! [#452][] [#451]: https://github.com/nextstrain/augur/pull/451 [#452]: https://github.com/nextstrain/augur/pull/452 [#458]: https://github.com/nextstrain/augur/pull/458 ## 6.4.1 (4 March 2020) ### Bug Fixes * export: AA labels are now exported for branches where a clade is also labeled [See PR 447](https://github.com/nextstrain/augur/pull/447) * export / validation: a dataset title is no longer required * release script now works on MacOS & code-signing is optional [See PR 448](https://github.com/nextstrain/augur/pull/448) * traits: Missing data is correctly handled ## 6.4.0 (26 February 2020) ### Features * align: New sequences can now be added to an existing alignment. [#422][] * align: Multiple sequence files can be provided as input. [#422][] * align: Extra debugging files such as `*.pre_aligner.fasta` and `*.post_aligner.fasta` are no longer produced by default. To request them, pass the `--debug` flag. [#422][] * align: De-duplicate input sequences, with a warning. [#422][] * export v2: Add support for the `branch_label` property in `display_defaults`, which was recently added to Auspice. [#445][] ### Bug fixes * align: Exits with an error earlier if arguments are invalid instead of only printing a warning. [#422][] * align: Performs more error checking and clarifies the help and error messages. [#422][] * export v2: Traits which are filters but not colorings are now exported as well, instead of being left out. [#442][] * export v2: Exits non-zero when validation fails, instead of masking errors. [#441][] * validate: In order to improve clarity, messages now include the filenames involved and distinguish between schema validation and internal consistency checks. [#441][] [#422]: https://github.com/nextstrain/augur/pull/422 [#441]: https://github.com/nextstrain/augur/pull/441 [#442]: https://github.com/nextstrain/augur/pull/442 [#445]: https://github.com/nextstrain/augur/pull/445 ## 6.3.0 (13 February 2020) ### Features * Augur `refine`, `ancestral` and `traits` now use the [upgraded TreeTime v0.7](https://github.com/neherlab/treetime/releases/tag/v0.7.0) This should have a number of under-the-hood improvements. [See PR 431](https://github.com/nextstrain/augur/pull/431) * ancestral: New options to either `--keep-ambiguous` or `--infer-ambiguous`. If using `--infer-ambiguous` the previous behavior will be maintained in which tips with `N` will have their nucleotide state inferred. If using `--keep-ambiguous`, these tips will be left as `N`. With this upgrade, we are still defaulting to `--infer-ambiguous`, however, we plan to swap default to `--keep-ambiguous` in the future. If this distintion matters to you, we would suggest that you explicitly record `--keep-ambiguous` / `--infer-ambiguous` in your build process. [Also part of PR 431](https://github.com/nextstrain/augur/pull/431) * traits: Allow input of `--weights` which references a `.tsv` file in the following format: ``` division Hubei 10.0 division Jiangxi 1.0 division Chongqing 1.0 ``` where these weights represent equilibrium frequencies in the CTMC transition model. We imagine the primary use of user-specified weights to correct for strong sampling biases in available data. [See PR 443](https://github.com/nextstrain/augur/pull/443) ### Bug fixes * Improvements to make shell scripts run more easily on Windows. [See PR 437](https://github.com/nextstrain/augur/pull/437) ## 6.2.0 (25 January 2020) ### Features * refine: Include `--divergence-units` option to distinguish between `mutations` and `mutations-per-site`. Keep `mutations-per-site` as default behavior. [See PR 435](https://github.com/nextstrain/augur/pull/435) ### Bug fixes * utils: Support v2 auspice JSONs in json_to_tree utility function. [See PR 432](https://github.com/nextstrain/augur/pull/432) ## 6.1.1 (17 December 2019) ### Bug fixes * frequencies: Fix bug in string matching for weighted frequencies introduced in v6.1.0. [See PR 426](https://github.com/nextstrain/augur/pull/426). ## 6.1.0 (13 December 2019) ### Features * export: Include `--description` option to pass in a Markdown file with dataset description. This is displays in Auspice in the footer. For rationale, [see Auspice issue 707](https://github.com/nextstrain/auspice/issues/707) and for Augur changes [see PR 423](https://github.com/nextstrain/augur/pull/423). ### Bug fixes * frequencies: Fix weighted frequencies when weight keys are unrepresented. [See PR 420](https://github.com/nextstrain/augur/pull/420). ## 6.0.0 (10 December 2019) ### Overview Version 6 is a major release of augur affecting many augur commands. The format of the exported JSON (v2) has changed and now merges the previously separate files containing tree and meta information. To maintain backward compatibility, the export command was split into `export v1` (old) and `export v2` (new). Detailed release notes are provided in the augur documentation [on read-the-docs](https://nextstrain-augur.readthedocs.io/en/stable/releases/v6.html). For a migration guide, consult [migrating-v5-v6](https://nextstrain-augur.readthedocs.io/en/stable/releases/migrating-v5-v6.html). ### Major features / changes * export: Swap from a separate `_tree.json` and `_meta.json` to a single "unified" `dataset.json` output file * export: Include additional command line options to alleviate need for Auspice config * export: Include option for reference sequence output * export: Move to GFF-style annotations * export: Validate exported JSONs against schema * ancestral: Allow output of FASTA and JSON files * import: Include `import beast` command to import labeled BEAST MCC tree * parse: Include `--prettify-fields` option to cleanup metadata fields * Documentation improvements ### Minor features / changes * colors.tsv: Allow whitespace, but insist on tab delimiting * lat_longs.tsv: Allow whitespace, but insist on tab delimiting * Remove code for old "non-modular" augur, old "non-modular" builds and Python tests * Improve test builds * filter: More interpretable output of how many sequences have been filtered * filter: Additional flag `--subsample-seed` to seed the random number generator and thereby make subsampling reproducible * sequence-traits: Numerical output as originally intended, but required an Auspice bugfix * traits: Explanation of what is considered missing data & how it is interpreted * traits: GTR models are exported in the output JSON for better accountability & reproducibility ## 5.4.1 (12 November 2019) ### Bug fixes * export v1: Include `--minify-json` option that was mistakenly not included in PR 398. [See PR 409](https://github.com/nextstrain/augur/pull/409) ## 5.4.0 (7 November 2019) ### Features * frequencies: Include `--minimal-clade-size-to-estimate` command line option. [See PR 383](https://github.com/nextstrain/augur/pull/383) * lbi: Include `--no-normalization` command line option. [See PR 380](https://github.com/nextstrain/augur/pull/380) ### Compatibility fixes * export: Include `v1` subcommand to allow forwards compatibiliy with Augur v6 builds. [See PR 398](https://github.com/nextstrain/augur/pull/398) ### Bug fixes * export: Include warning if using a mismatched v6 translate file. [See PR 392](https://github.com/nextstrain/augur/pull/392) * frequencies: Fix determination of interval for clipping of non-informative pivots ## 5.3.0 (9 September 2019) ### Features * export: Improve printing of error messages with missing or conflicting author data. [See issue 274](https://github.com/nextstrain/augur/issues/274) * filter: Improve printing of dropped strains to include reasons why strains were dropped. [See PR 367](https://github.com/nextstrain/augur/pull/367) * refine: Add support for command line flag `--keep-polytomies` to not resolve polytomies when producing a time tree. [See PR 345](https://github.com/nextstrain/augur/pull/345) ### Bug fixes * Catch and throw error when there are duplicate strain names. [See PR 356](https://github.com/nextstrain/augur/pull/356) * Fix missing annotation of "parent" attribute for the root node * Run shell commands with more robust error checking. [See PR 350](https://github.com/nextstrain/augur/pull/350) * Better handling of rerooting options for trees without temporal information. [See issue 348](https://github.com/nextstrain/augur/issues/348) ### Data * Small fixes in geographic coordinate file ## 5.2.1 (4 August 2019) ### Bug fixes * Print more useful error message if Python recursion limit is reached. [See issue 328](https://github.com/nextstrain/augur/issues/328) * Print more useful error message if vcftools if missing. [See PR 312](https://github.com/nextstrain/augur/pull/321) ### Development * Significantly relax version requirements specified in setup.py for biopython, pandas, etc... Additionally, move lesser used packages (cvxopt, matplotlib, seaborn) into an "extras_require" field. This should reduce conflicts with other pip installed packages. [See PR 323](https://github.com/nextstrain/augur/pull/323) ### Data * Include additional country lat/longs in base data ## 5.2.0 (23 July 2019) ### Features * ancestral: Adds a new flag `--output-sequences` and logic to support saving ancestral sequences and leaves from the given tree to a FASTA file. Also adds a redundant, more specific flag `--output-node-data` that will replace the current `--output` flag in the next major version release of augur. For now, we issue a deprecation warning when the `--output` flag is used. Note that FASTA output is only allowed for FASTA inputs and not for VCFs. We don't allow FASTA output for VCFs anywhere else and, if we did here, the output files would be very large. [See PR 293](https://github.com/nextstrain/augur/pull/293) * frequencies: Allow `--method kde` flag to compute frequencies via KDE kernels. This complements existing method of `--method diffusion`. Generally, KDE frequencies should be more robust and faster to run, but will not project as well when forecasting frequencies into the future. [See PR 271](https://github.com/nextstrain/augur/pull/271) ### Bug fixes * ancestral, traits, translate: Print warning if supplied tree is missing internal node names (normally provided by running `augur refine`). [See PR 283](https://github.com/nextstrain/augur/pull/283) * Include pip in Conda enviroment file. [See PR 309](https://github.com/nextstrain/augur/pull/309) ### Documentation * Document environment variables respected by Augur ### Development * Remove matplotlib and seaborn from `setup.py` install. These are still called a few places in augur (like `titers.validate()`), but it was deemed rare enough that remove this from `setup.py` would ease general install for most users. Additionally, the ipdb debugger has been moved to dev dependencies. [See PR 291](https://github.com/nextstrain/augur/pull/291) * Refactor logic to read trees from multiple formats into a function. Adds a new function `read_tree` to the `utils` module that tries to safely handle reading trees in multiple input formats. [See PR 310](https://github.com/nextstrain/augur/pull/310) ## 5.1.1 (1 July 2019) ### Features * tree: Add support for the GTR+R10 substitution model. * tree: Support parentheses in node names when using IQ-TREE. ### Bug fixes * Use the center of the UK for its coordinates instead of London. * filter: Mark `--output` required, which it always was but wasn't marked. * filter: Avoid error when no excluded strains file is provided. * export: Fix for preliminary version 2 schema support. * refine: Correct error handling when the tree file is missing or empty. ### Documentation * Add examples of Augur usage in the wild. * Rename and reorganize CLI and Python API pages a little bit to make "where do I start learning to use Augur?" clearer to non-devs. ### Development * Relax version requirements of pandas and seaborn. The hope is this will make installation smoother (particularly alongside other packages which require newer pandas versions) while not encountering breaking changes in newer versions ourselves. ## 5.1.0 (29 May 2019) ### Documentation * Documentation is now available online for the augur CLI and Python API via Read The Docs: . The _latest_ version on RTD points to the git master branch, and the _stable_ version to the most recent tagged release. Instructions for building the docs locally are in the README. ## 5.0.0 (26 May 2019) ### Features * ancestral: New option to `--keep-ambiguous`, which will not infer nucleotides at ambiguous (N) sites on tip sequences and instead leave as 'N' [See PR 280.](https://github.com/nextstrain/augur/pull/280) * ancestral: New option to `--keep-overhangs`, which will not infer nucleotides for gaps on either side of the alignment and instead leave as '-'. [See PR 286.](https://github.com/nextstrain/augur/pull/286) * clades: This module has been reconfigured to identify clade defining mutations on top of a reference rather than identifying mutations along the tree. The command line arguments are the same except for the addition of `--reference`, which explicitly passes in a reference sequence. If `--reference` is not defined, then reference will be drawn from the root node of the phylogeny by looking for `sequence` attribute attached to root node of `--tree`. [See PR 288.](https://github.com/nextstrain/augur/pull/288) * refine: Revise rooting behavior. Previously `--root` took 'best', 'residual', 'rsq' and 'min_dev' as options. In this update `--root` takes 'best', least-squares', 'min_dev' and 'oldest' as rooting options. This eliminates 'residual' and 'rsq' as options. This is a **backwards-incompatible** change. This requires updating TreeTime to version 0.5.4 or above. [See PR 263.](https://github.com/nextstrain/augur/pull/263) * refine: Add `--keep-root` option that overrides `--root` specification to preserve tree rooting. [See PR 263.](https://github.com/nextstrain/augur/pull/263) * refine: Add `--covariance` and `--no-covariance` options that specify TreeTime behavior. [See PR 263.](https://github.com/nextstrain/augur/pull/263) * titers: This command now throws an `InsufficientDataException` if there are not sufficient titers to infer a model. This is paired with a new `--allow-empty-model` flag that proceeds past the `InsufficientDataException` and writes out a model JSON corresponding to an 'empty' model. [See PR 281.](https://github.com/nextstrain/augur/pull/281) * By default JSONs are written with `index=1` to give a pretty-printed JSON. However, this adds significant file size to large tree JSONs. If the environment variable `AUGUR_MINIFY_JSON` is set then minified JSONs are printed instead. This mirror the explicit `--minify-json` argument available to `augur export`. [See PR 278.](https://github.com/nextstrain/augur/pull/278) ### Bug fixes * export: Cast numeric values to strings for export. [See issue 287.](https://github.com/nextstrain/augur/issues/287) * export: Legend order preserves ordering passed in by user for traits that have default colorings ('country' and 'region'). [See PR 284.](https://github.com/nextstrain/augur/pull/284) * refine: Previously, the `--root` argument was silently ignored when no timetree was inferred. Re-rooting with an outgroup is sensible even without a timetree. [See PR 282.](https://github.com/nextstrain/augur/pull/282) ## 4.0.0 (24 April 2019) ### Features * distance: New interface for specifying distances between sequences. This is a **backwards-incompatible** change. Refer to `augur distance --help` for all the details. * export: Add a `--minify-json` flag to omit indentation in Auspice JSONs. ### Bug fixes * frequencies: Emit one-based coordinates (instead of zero-based) for KDE-based mutation frequencies ### Data * Include additional country lat/longs in base data ## 3.1.8 (13 February 2019) ### Bug fixes * titers: fix calculation of `mean_potentency` for model export ## 3.1.7 (5 February 2019) ### Bug fixes * Update to TreeTime 0.5.3 * tree: Fix bug in printing causing errors in Python versions <3.6 * tree: Alter site masking to not be so memory intensive ## 3.1.6 (29 January 2019) ### Features * filter: Allow negative matches to `--exclude-where`. For example, `--exclude-where country!=usa` would exclude all samples where metadata `country` does not equal `usa`. * tree: Allow `--exclude-sites` to work with FASTA input. Ensure that indexing of input sites is one-based. ### Bug fixes * fix loading of strains when loading titers from file, previously strains had not been filtered to match the tree appropriately ## 3.1.5 (13 January 2019) ### Features * frequencies: Add `--ignore-char` and `--minimal-clade-size` as options. * frequencies: Include `--stiffness` and `--inertia` as options. * titers: Allow multiple titer date files in `--titers` import. ### Bug fixes * filter: Fix `--non-nucleotide` call to include `?` as allowed character. * tree: Fix `--method raxml` to properly delimit interim RAxML output so that simultaneous builds don't conflict. ### Data * Include additional country lat/longs in base data ## 3.1.4 (1 January 2019) ### Bug fixes * frequencies: Include `counts` in `augur frequencies` output JSON to support downstream plotting. ### Data * Include additional country lat/longs in base data ## 3.1.3 (29 December 2018) ### Features * filter: Add `--non-nucleotide` option to remove sequences with non-conforming nucleotide characters. ### Bug fixes * Revise treatment of `-`, ` ` in `augur parse` to leave `-` as is and remove white space. Also delimit `[` and `]` to `_`. * Fix bug in naming of temp IQTREE fixes to prevent conflicts from simultaneous builds. ### Data * Include additional country lat/longs in base data ### Development * Remove non-modular measles build in favor of [nextstrain/measles](https://github.com/nextstrain/measles) repo. ## 3.1.2 (21 December 2018) ### Bug fixes * Update dependencies ## 3.1.1 (21 December 2018) ### Bug fixes * filter: Fix `--include-where`. Adds an `all_seq` variable needed by the logic to include records by value. This was previously working for VCF but threw an exception for sequences in FASTA format. * Update flu reference viruses and lat longs. * Update dependencies ## 3.1.0 (18 December 2018) ### Features * reconstruct-sequences: Include `augur reconstruct-sequences` module that reconstructs alignments from mutations inferred on the tree * distance: Include `augur distance` module that calculates the distance between amino acid sequences across entire genes or at a predefined subset of sites * lbi: Include `augur lbi` module that calculates local branching index (LBI) for a given tree and one or more sets of parameters. * frequencies: Include `--method kde` as option to `augur frequencies`, separate from the existing `--method diffusion` logic. KDE frequencies are faster and better for smaller clades but don't extrapolate as well as diffusion frequencies. * titers: Enable annotation of nodes in a tree from the substitution model ## 3.0.5.dev1 (26 November 2018) ### Bug fixes * translate: Nucleotide ("nuc") annotation for non-bacterial builds starts at 0 again, not 1, fixing a regression. ### Documentation * Schemas: Correct coordinate system description for genome start/end annotations. ## 3.0.4.dev1 (26 November 2018) ### Bug fixes * validate: Fix regression for gene names containing an asterisk. ### Development * Fix Travis CI tests which were silently not running. ## 3.0.3.dev1 (26 November 2018) ### Features * refine: Add a `--clock-std-dev` option * traits: Add a `--sampling-bias-correction` option for mugration model * validate: Gene names in tree annotations may now contain hyphens. Compatible with Auspice version 1.33.0 and later. * All JSON is now emitted with sorted keys, making it easier to diff and run other textual comparisons against output. ### Bug fixes * filter: Only consider A, T, C, and G when calculating sequence length for the `--min-length` option. * filter: Allow comments in files passed to `--exclude`. * filter: Ignore case when matching trait values against excluded values. * Normalize custom geographic names to lower case for consistent matching. ### Data * Fix typo in geographic entry for `netherlands`. * Schemas: Reconcile naming patterns used in gene definitions and tree annotations. ### Development * Upgrade TreeTime dependency to 0.5.x and at least 0.5.1. * Add an `environment.yml` file for use with `conda env create`. * Stop testing under Python 2.7 on Travis CI. ## 3.0.2.dev1 (27 September 2018) ### Bug fixes * translate: Fix broken `--help` message ## 3.0.1.dev1 (27 September 2018) ### Features * align and tree: The --nthreads option now accepts the special value "auto" to automatically set the number of threads to the number of CPU cores available. * Alias `augur --version` to `augur version` ### Bug fixes * tree: The --nthreads option is now respected. Previously all tree builders were ignoring the value and using either 2 threads (RAxML, IQ-TREE) or as many threads as cores (FastTree, if the OpenMP version). * translate: Check for and, if necessary pad, nucleotide sequences which aren't a multiple of 3 earlier to avoid errors later. * export: Optionally write inferred nucleotide and amino acid sequences (or mutations) to a separate file. * export: Omit genes with no amino acid mutations. * validate: Allow underscores in gene names. * refine: Remove unused --nthreads argument. * ancestral, filter, tree, refine: Exit 1 instead of -1 on error. * Print the help message, instead of throwing an exception, when `augur` is run without arguments. ### Documentation * Briefly describe each command in its `--help` output and in the global `augur --help` output. * Revamp README to emphasize new, modular augur and make it suitable for inclusion on PyPi. * Reconciled conflicting license declarations; augur is AGPLv3 (not MIT) licensed like the rest of Nextstrain. * Include URLs for bug reports, the change log, and the source on PyPi. ### Data * Geographic coordinates added for the Netherlands and the Philippines. ### Development * Reset the `release` branch when rewinding a failed local release process. * Refactor the augur program and command architecture for improved maintainability. ## 3.0.0.dev3 (4 September 2018) ### Development * Use an allowed Topic classifier so we can upload to PyPi * Ignore distribution egg-info build files ## 3.0.0.dev2 (4 September 2018) ### Features * Export: Add safety checks for optional annotations and geo data * Include more lat/longs in the default geo data ### Development * Add release tooling * Document the release process and a few development practices * Travis CI: Switch to rebuilding the Docker image only for new releases * Remove ebola, lassa, tb, WNV, and zika builds now in their own repos. These builds are now available at URLs like , for example. ## 3.0.0.dev1 (unreleased) ### Development * Start versioning augur beginning with 3.0.0. A new `augur version` command reports the running version. augur-24.2.2/DEPRECATED.md000066400000000000000000000032361456376326500146730ustar00rootroot00000000000000# Deprecated These features are deprecated, which means they are no longer maintained and will go away in a future major version of Augur. They are currently still available for backwards compatibility, but should not be used in new code. ## `augur parse` preference of `name` over `strain` as the sequence ID field *Deprecated in February 2024. Planned to be reordered June 2024 or after.* Currently, `augur parse` checks for a 'name' field and then a 'strain' field to use as a sequence ID. This order will be changed in favor of searching for a 'strain' and then a 'name' field to be more consistent with the rest of Augur. Users who have both 'name' and 'strain' fields in their data, and want to favor using the 'name' field should add the following `augur parse` parameter `--output-id-field 'name'`. ## `augur.utils.read_strains` *Deprecated in December 2023. Planned for removal March 2024 or after.* This is part of a [larger effort](https://github.com/nextstrain/augur/issues/1011) to formalize Augur's Python API. We recognize the existing usage of this function, so it has been moved to `augur.io.read_strains`. ## `augur export v1` *Deprecated in version 22.2.0 (July 2023). Planned for [removal](https://github.com/nextstrain/augur/issues/1266) January 2024 or after.* `augur export v2` was introduced in Augur version 6.0.0. Migrate by following the [official guide](https://docs.nextstrain.org/projects/augur/page/releases/migrating-v5-v6.html). ## `augur ancestral --output` *Deprecated in version 5.2.0 (December 2019). Removed in version 7.0.0 (April 2020).* `--output` was replaced by `--output-node-data` to accommodate the addition of `--output-sequences`. augur-24.2.2/LICENSE.nextstrain-cli000066400000000000000000000025641456376326500167240ustar00rootroot00000000000000This license applies to the original copy of resource functions from the Nextstrain CLI project into this project, incorporated in "augur/data/__init__.py". Any subsequent modifications to this project's copy of those functions are licensed under the license of this project, not of Nextstrain CLI. MIT License Copyright (c) 2018–2021 Trevor Bedford and Richard Neher Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. augur-24.2.2/LICENSE.txt000066400000000000000000000772031456376326500146010ustar00rootroot00000000000000 GNU AFFERO GENERAL PUBLIC LICENSE Version 3, 19 November 2007 Copyright (C) 2007 Free Software Foundation, Inc. Everyone is permitted to copy and distribute verbatim copies of this license document, but changing it is not allowed. Preamble The GNU Affero General Public License is a free, copyleft license for software and other kinds of works, specifically designed to ensure cooperation with the community in the case of network server software. The licenses for most software and other practical works are designed to take away your freedom to share and change the works. By contrast, our General Public Licenses are intended to guarantee your freedom to share and change all versions of a program--to make sure it remains free software for all its users. When we speak of free software, we are referring to freedom, not price. Our General Public Licenses are designed to make sure that you have the freedom to distribute copies of free software (and charge for them if you wish), that you receive source code or can get it if you want it, that you can change the software or use pieces of it in new free programs, and that you know you can do these things. Developers that use our General Public Licenses protect your rights with two steps: (1) assert copyright on the software, and (2) offer you this License which gives you legal permission to copy, distribute and/or modify the software. A secondary benefit of defending all users' freedom is that improvements made in alternate versions of the program, if they receive widespread use, become available for other developers to incorporate. Many developers of free software are heartened and encouraged by the resulting cooperation. However, in the case of software used on network servers, this result may fail to come about. The GNU General Public License permits making a modified version and letting the public access it on a server without ever releasing its source code to the public. The GNU Affero General Public License is designed specifically to ensure that, in such cases, the modified source code becomes available to the community. It requires the operator of a network server to provide the source code of the modified version running there to the users of that server. Therefore, public use of a modified version, on a publicly accessible server, gives the public access to the source code of the modified version. An older license, called the Affero General Public License and published by Affero, was designed to accomplish similar goals. This is a different license, not a version of the Affero GPL, but Affero has released a new version of the Affero GPL which permits relicensing under this license. The precise terms and conditions for copying, distribution and modification follow. TERMS AND CONDITIONS 0. Definitions. "This License" refers to version 3 of the GNU Affero General Public License. "Copyright" also means copyright-like laws that apply to other kinds of works, such as semiconductor masks. "The Program" refers to any copyrightable work licensed under this License. Each licensee is addressed as "you". "Licensees" and "recipients" may be individuals or organizations. To "modify" a work means to copy from or adapt all or part of the work in a fashion requiring copyright permission, other than the making of an exact copy. The resulting work is called a "modified version" of the earlier work or a work "based on" the earlier work. A "covered work" means either the unmodified Program or a work based on the Program. To "propagate" a work means to do anything with it that, without permission, would make you directly or secondarily liable for infringement under applicable copyright law, except executing it on a computer or modifying a private copy. Propagation includes copying, distribution (with or without modification), making available to the public, and in some countries other activities as well. To "convey" a work means any kind of propagation that enables other parties to make or receive copies. Mere interaction with a user through a computer network, with no transfer of a copy, is not conveying. An interactive user interface displays "Appropriate Legal Notices" to the extent that it includes a convenient and prominently visible feature that (1) displays an appropriate copyright notice, and (2) tells the user that there is no warranty for the work (except to the extent that warranties are provided), that licensees may convey the work under this License, and how to view a copy of this License. If the interface presents a list of user commands or options, such as a menu, a prominent item in the list meets this criterion. 1. Source Code. The "source code" for a work means the preferred form of the work for making modifications to it. "Object code" means any non-source form of a work. A "Standard Interface" means an interface that either is an official standard defined by a recognized standards body, or, in the case of interfaces specified for a particular programming language, one that is widely used among developers working in that language. The "System Libraries" of an executable work include anything, other than the work as a whole, that (a) is included in the normal form of packaging a Major Component, but which is not part of that Major Component, and (b) serves only to enable use of the work with that Major Component, or to implement a Standard Interface for which an implementation is available to the public in source code form. A "Major Component", in this context, means a major essential component (kernel, window system, and so on) of the specific operating system (if any) on which the executable work runs, or a compiler used to produce the work, or an object code interpreter used to run it. The "Corresponding Source" for a work in object code form means all the source code needed to generate, install, and (for an executable work) run the object code and to modify the work, including scripts to control those activities. However, it does not include the work's System Libraries, or general-purpose tools or generally available free programs which are used unmodified in performing those activities but which are not part of the work. For example, Corresponding Source includes interface definition files associated with source files for the work, and the source code for shared libraries and dynamically linked subprograms that the work is specifically designed to require, such as by intimate data communication or control flow between those subprograms and other parts of the work. The Corresponding Source need not include anything that users can regenerate automatically from other parts of the Corresponding Source. The Corresponding Source for a work in source code form is that same work. 2. Basic Permissions. All rights granted under this License are granted for the term of copyright on the Program, and are irrevocable provided the stated conditions are met. This License explicitly affirms your unlimited permission to run the unmodified Program. The output from running a covered work is covered by this License only if the output, given its content, constitutes a covered work. This License acknowledges your rights of fair use or other equivalent, as provided by copyright law. You may make, run and propagate covered works that you do not convey, without conditions so long as your license otherwise remains in force. You may convey covered works to others for the sole purpose of having them make modifications exclusively for you, or provide you with facilities for running those works, provided that you comply with the terms of this License in conveying all material for which you do not control copyright. Those thus making or running the covered works for you must do so exclusively on your behalf, under your direction and control, on terms that prohibit them from making any copies of your copyrighted material outside their relationship with you. Conveying under any other circumstances is permitted solely under the conditions stated below. Sublicensing is not allowed; section 10 makes it unnecessary. 3. Protecting Users' Legal Rights From Anti-Circumvention Law. No covered work shall be deemed part of an effective technological measure under any applicable law fulfilling obligations under article 11 of the WIPO copyright treaty adopted on 20 December 1996, or similar laws prohibiting or restricting circumvention of such measures. When you convey a covered work, you waive any legal power to forbid circumvention of technological measures to the extent such circumvention is effected by exercising rights under this License with respect to the covered work, and you disclaim any intention to limit operation or modification of the work as a means of enforcing, against the work's users, your or third parties' legal rights to forbid circumvention of technological measures. 4. Conveying Verbatim Copies. You may convey verbatim copies of the Program's source code as you receive it, in any medium, provided that you conspicuously and appropriately publish on each copy an appropriate copyright notice; keep intact all notices stating that this License and any non-permissive terms added in accord with section 7 apply to the code; keep intact all notices of the absence of any warranty; and give all recipients a copy of this License along with the Program. You may charge any price or no price for each copy that you convey, and you may offer support or warranty protection for a fee. 5. Conveying Modified Source Versions. You may convey a work based on the Program, or the modifications to produce it from the Program, in the form of source code under the terms of section 4, provided that you also meet all of these conditions: a) The work must carry prominent notices stating that you modified it, and giving a relevant date. b) The work must carry prominent notices stating that it is released under this License and any conditions added under section 7. This requirement modifies the requirement in section 4 to "keep intact all notices". c) You must license the entire work, as a whole, under this License to anyone who comes into possession of a copy. This License will therefore apply, along with any applicable section 7 additional terms, to the whole of the work, and all its parts, regardless of how they are packaged. This License gives no permission to license the work in any other way, but it does not invalidate such permission if you have separately received it. d) If the work has interactive user interfaces, each must display Appropriate Legal Notices; however, if the Program has interactive interfaces that do not display Appropriate Legal Notices, your work need not make them do so. A compilation of a covered work with other separate and independent works, which are not by their nature extensions of the covered work, and which are not combined with it such as to form a larger program, in or on a volume of a storage or distribution medium, is called an "aggregate" if the compilation and its resulting copyright are not used to limit the access or legal rights of the compilation's users beyond what the individual works permit. Inclusion of a covered work in an aggregate does not cause this License to apply to the other parts of the aggregate. 6. Conveying Non-Source Forms. You may convey a covered work in object code form under the terms of sections 4 and 5, provided that you also convey the machine-readable Corresponding Source under the terms of this License, in one of these ways: a) Convey the object code in, or embodied in, a physical product (including a physical distribution medium), accompanied by the Corresponding Source fixed on a durable physical medium customarily used for software interchange. b) Convey the object code in, or embodied in, a physical product (including a physical distribution medium), accompanied by a written offer, valid for at least three years and valid for as long as you offer spare parts or customer support for that product model, to give anyone who possesses the object code either (1) a copy of the Corresponding Source for all the software in the product that is covered by this License, on a durable physical medium customarily used for software interchange, for a price no more than your reasonable cost of physically performing this conveying of source, or (2) access to copy the Corresponding Source from a network server at no charge. c) Convey individual copies of the object code with a copy of the written offer to provide the Corresponding Source. This alternative is allowed only occasionally and noncommercially, and only if you received the object code with such an offer, in accord with subsection 6b. d) Convey the object code by offering access from a designated place (gratis or for a charge), and offer equivalent access to the Corresponding Source in the same way through the same place at no further charge. You need not require recipients to copy the Corresponding Source along with the object code. If the place to copy the object code is a network server, the Corresponding Source may be on a different server (operated by you or a third party) that supports equivalent copying facilities, provided you maintain clear directions next to the object code saying where to find the Corresponding Source. Regardless of what server hosts the Corresponding Source, you remain obligated to ensure that it is available for as long as needed to satisfy these requirements. e) Convey the object code using peer-to-peer transmission, provided you inform other peers where the object code and Corresponding Source of the work are being offered to the general public at no charge under subsection 6d. A separable portion of the object code, whose source code is excluded from the Corresponding Source as a System Library, need not be included in conveying the object code work. A "User Product" is either (1) a "consumer product", which means any tangible personal property which is normally used for personal, family, or household purposes, or (2) anything designed or sold for incorporation into a dwelling. In determining whether a product is a consumer product, doubtful cases shall be resolved in favor of coverage. For a particular product received by a particular user, "normally used" refers to a typical or common use of that class of product, regardless of the status of the particular user or of the way in which the particular user actually uses, or expects or is expected to use, the product. A product is a consumer product regardless of whether the product has substantial commercial, industrial or non-consumer uses, unless such uses represent the only significant mode of use of the product. "Installation Information" for a User Product means any methods, procedures, authorization keys, or other information required to install and execute modified versions of a covered work in that User Product from a modified version of its Corresponding Source. The information must suffice to ensure that the continued functioning of the modified object code is in no case prevented or interfered with solely because modification has been made. If you convey an object code work under this section in, or with, or specifically for use in, a User Product, and the conveying occurs as part of a transaction in which the right of possession and use of the User Product is transferred to the recipient in perpetuity or for a fixed term (regardless of how the transaction is characterized), the Corresponding Source conveyed under this section must be accompanied by the Installation Information. But this requirement does not apply if neither you nor any third party retains the ability to install modified object code on the User Product (for example, the work has been installed in ROM). The requirement to provide Installation Information does not include a requirement to continue to provide support service, warranty, or updates for a work that has been modified or installed by the recipient, or for the User Product in which it has been modified or installed. Access to a network may be denied when the modification itself materially and adversely affects the operation of the network or violates the rules and protocols for communication across the network. Corresponding Source conveyed, and Installation Information provided, in accord with this section must be in a format that is publicly documented (and with an implementation available to the public in source code form), and must require no special password or key for unpacking, reading or copying. 7. Additional Terms. "Additional permissions" are terms that supplement the terms of this License by making exceptions from one or more of its conditions. Additional permissions that are applicable to the entire Program shall be treated as though they were included in this License, to the extent that they are valid under applicable law. If additional permissions apply only to part of the Program, that part may be used separately under those permissions, but the entire Program remains governed by this License without regard to the additional permissions. When you convey a copy of a covered work, you may at your option remove any additional permissions from that copy, or from any part of it. (Additional permissions may be written to require their own removal in certain cases when you modify the work.) You may place additional permissions on material, added by you to a covered work, for which you have or can give appropriate copyright permission. Notwithstanding any other provision of this License, for material you add to a covered work, you may (if authorized by the copyright holders of that material) supplement the terms of this License with terms: a) Disclaiming warranty or limiting liability differently from the terms of sections 15 and 16 of this License; or b) Requiring preservation of specified reasonable legal notices or author attributions in that material or in the Appropriate Legal Notices displayed by works containing it; or c) Prohibiting misrepresentation of the origin of that material, or requiring that modified versions of such material be marked in reasonable ways as different from the original version; or d) Limiting the use for publicity purposes of names of licensors or authors of the material; or e) Declining to grant rights under trademark law for use of some trade names, trademarks, or service marks; or f) Requiring indemnification of licensors and authors of that material by anyone who conveys the material (or modified versions of it) with contractual assumptions of liability to the recipient, for any liability that these contractual assumptions directly impose on those licensors and authors. All other non-permissive additional terms are considered "further restrictions" within the meaning of section 10. If the Program as you received it, or any part of it, contains a notice stating that it is governed by this License along with a term that is a further restriction, you may remove that term. If a license document contains a further restriction but permits relicensing or conveying under this License, you may add to a covered work material governed by the terms of that license document, provided that the further restriction does not survive such relicensing or conveying. If you add terms to a covered work in accord with this section, you must place, in the relevant source files, a statement of the additional terms that apply to those files, or a notice indicating where to find the applicable terms. Additional terms, permissive or non-permissive, may be stated in the form of a separately written license, or stated as exceptions; the above requirements apply either way. 8. Termination. You may not propagate or modify a covered work except as expressly provided under this License. Any attempt otherwise to propagate or modify it is void, and will automatically terminate your rights under this License (including any patent licenses granted under the third paragraph of section 11). However, if you cease all violation of this License, then your license from a particular copyright holder is reinstated (a) provisionally, unless and until the copyright holder explicitly and finally terminates your license, and (b) permanently, if the copyright holder fails to notify you of the violation by some reasonable means prior to 60 days after the cessation. Moreover, your license from a particular copyright holder is reinstated permanently if the copyright holder notifies you of the violation by some reasonable means, this is the first time you have received notice of violation of this License (for any work) from that copyright holder, and you cure the violation prior to 30 days after your receipt of the notice. Termination of your rights under this section does not terminate the licenses of parties who have received copies or rights from you under this License. If your rights have been terminated and not permanently reinstated, you do not qualify to receive new licenses for the same material under section 10. 9. Acceptance Not Required for Having Copies. You are not required to accept this License in order to receive or run a copy of the Program. Ancillary propagation of a covered work occurring solely as a consequence of using peer-to-peer transmission to receive a copy likewise does not require acceptance. However, nothing other than this License grants you permission to propagate or modify any covered work. These actions infringe copyright if you do not accept this License. Therefore, by modifying or propagating a covered work, you indicate your acceptance of this License to do so. 10. Automatic Licensing of Downstream Recipients. Each time you convey a covered work, the recipient automatically receives a license from the original licensors, to run, modify and propagate that work, subject to this License. You are not responsible for enforcing compliance by third parties with this License. An "entity transaction" is a transaction transferring control of an organization, or substantially all assets of one, or subdividing an organization, or merging organizations. If propagation of a covered work results from an entity transaction, each party to that transaction who receives a copy of the work also receives whatever licenses to the work the party's predecessor in interest had or could give under the previous paragraph, plus a right to possession of the Corresponding Source of the work from the predecessor in interest, if the predecessor has it or can get it with reasonable efforts. You may not impose any further restrictions on the exercise of the rights granted or affirmed under this License. For example, you may not impose a license fee, royalty, or other charge for exercise of rights granted under this License, and you may not initiate litigation (including a cross-claim or counterclaim in a lawsuit) alleging that any patent claim is infringed by making, using, selling, offering for sale, or importing the Program or any portion of it. 11. Patents. A "contributor" is a copyright holder who authorizes use under this License of the Program or a work on which the Program is based. The work thus licensed is called the contributor's "contributor version". A contributor's "essential patent claims" are all patent claims owned or controlled by the contributor, whether already acquired or hereafter acquired, that would be infringed by some manner, permitted by this License, of making, using, or selling its contributor version, but do not include claims that would be infringed only as a consequence of further modification of the contributor version. For purposes of this definition, "control" includes the right to grant patent sublicenses in a manner consistent with the requirements of this License. Each contributor grants you a non-exclusive, worldwide, royalty-free patent license under the contributor's essential patent claims, to make, use, sell, offer for sale, import and otherwise run, modify and propagate the contents of its contributor version. In the following three paragraphs, a "patent license" is any express agreement or commitment, however denominated, not to enforce a patent (such as an express permission to practice a patent or covenant not to sue for patent infringement). To "grant" such a patent license to a party means to make such an agreement or commitment not to enforce a patent against the party. If you convey a covered work, knowingly relying on a patent license, and the Corresponding Source of the work is not available for anyone to copy, free of charge and under the terms of this License, through a publicly available network server or other readily accessible means, then you must either (1) cause the Corresponding Source to be so available, or (2) arrange to deprive yourself of the benefit of the patent license for this particular work, or (3) arrange, in a manner consistent with the requirements of this License, to extend the patent license to downstream recipients. "Knowingly relying" means you have actual knowledge that, but for the patent license, your conveying the covered work in a country, or your recipient's use of the covered work in a country, would infringe one or more identifiable patents in that country that you have reason to believe are valid. If, pursuant to or in connection with a single transaction or arrangement, you convey, or propagate by procuring conveyance of, a covered work, and grant a patent license to some of the parties receiving the covered work authorizing them to use, propagate, modify or convey a specific copy of the covered work, then the patent license you grant is automatically extended to all recipients of the covered work and works based on it. A patent license is "discriminatory" if it does not include within the scope of its coverage, prohibits the exercise of, or is conditioned on the non-exercise of one or more of the rights that are specifically granted under this License. You may not convey a covered work if you are a party to an arrangement with a third party that is in the business of distributing software, under which you make payment to the third party based on the extent of your activity of conveying the work, and under which the third party grants, to any of the parties who would receive the covered work from you, a discriminatory patent license (a) in connection with copies of the covered work conveyed by you (or copies made from those copies), or (b) primarily for and in connection with specific products or compilations that contain the covered work, unless you entered into that arrangement, or that patent license was granted, prior to 28 March 2007. Nothing in this License shall be construed as excluding or limiting any implied license or other defenses to infringement that may otherwise be available to you under applicable patent law. 12. No Surrender of Others' Freedom. If conditions are imposed on you (whether by court order, agreement or otherwise) that contradict the conditions of this License, they do not excuse you from the conditions of this License. If you cannot convey a covered work so as to satisfy simultaneously your obligations under this License and any other pertinent obligations, then as a consequence you may not convey it at all. For example, if you agree to terms that obligate you to collect a royalty for further conveying from those to whom you convey the Program, the only way you could satisfy both those terms and this License would be to refrain entirely from conveying the Program. 13. Remote Network Interaction; Use with the GNU General Public License. Notwithstanding any other provision of this License, if you modify the Program, your modified version must prominently offer all users interacting with it remotely through a computer network (if your version supports such interaction) an opportunity to receive the Corresponding Source of your version by providing access to the Corresponding Source from a network server at no charge, through some standard or customary means of facilitating copying of software. This Corresponding Source shall include the Corresponding Source for any work covered by version 3 of the GNU General Public License that is incorporated pursuant to the following paragraph. Notwithstanding any other provision of this License, you have permission to link or combine any covered work with a work licensed under version 3 of the GNU General Public License into a single combined work, and to convey the resulting work. The terms of this License will continue to apply to the part which is the covered work, but the work with which it is combined will remain governed by version 3 of the GNU General Public License. 14. Revised Versions of this License. The Free Software Foundation may publish revised and/or new versions of the GNU Affero General Public License from time to time. Such new versions will be similar in spirit to the present version, but may differ in detail to address new problems or concerns. Each version is given a distinguishing version number. If the Program specifies that a certain numbered version of the GNU Affero General Public License "or any later version" applies to it, you have the option of following the terms and conditions either of that numbered version or of any later version published by the Free Software Foundation. If the Program does not specify a version number of the GNU Affero General Public License, you may choose any version ever published by the Free Software Foundation. If the Program specifies that a proxy can decide which future versions of the GNU Affero General Public License can be used, that proxy's public statement of acceptance of a version permanently authorizes you to choose that version for the Program. Later license versions may give you additional or different permissions. However, no additional obligations are imposed on any author or copyright holder as a result of your choosing to follow a later version. 15. Disclaimer of Warranty. THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING, REPAIR OR CORRECTION. 16. Limitation of Liability. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES. 17. Interpretation of Sections 15 and 16. If the disclaimer of warranty and limitation of liability provided above cannot be given local legal effect according to their terms, reviewing courts shall apply local law that most closely approximates an absolute waiver of all civil liability in connection with the Program, unless a warranty or assumption of liability accompanies a copy of the Program in return for a fee. END OF TERMS AND CONDITIONS augur-24.2.2/MANIFEST.in000066400000000000000000000000241456376326500144770ustar00rootroot00000000000000include LICENSE.txt augur-24.2.2/README.md000066400000000000000000000062621456376326500142320ustar00rootroot00000000000000[![Build Status](https://github.com/nextstrain/augur/actions/workflows/ci.yaml/badge.svg?branch=master)](https://github.com/nextstrain/augur/actions/workflows/ci.yaml) [![PyPI version](https://badge.fury.io/py/nextstrain-augur.svg)](https://pypi.org/project/nextstrain-augur/) [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/augur/README.html) [![Documentation Status](https://readthedocs.org/projects/nextstrain-augur/badge/?version=latest)](https://docs.nextstrain.org/projects/augur/en/stable/) [![License: AGPL v3](https://img.shields.io/badge/License-AGPL%20v3-blue.svg)](https://www.gnu.org/licenses/agpl-3.0) [![DOI](https://joss.theoj.org/papers/10.21105/joss.02906/status.svg)](https://doi.org/10.21105/joss.02906) ## About Nextstrain Nextstrain is an open-source project to harness the scientific and public health potential of pathogen genome data. We provide a continually-updated view of publicly available data with powerful analytics and visualizations showing pathogen evolution and epidemic spread. Our goal is to aid epidemiological understanding and improve outbreak response. Resulting data and inferences are available live at the website [nextstrain.org](https://nextstrain.org). ## About Augur *Definition: One held to foretell events by omens.* Augur is the bioinformatics toolkit we use to track evolution from sequence and serological data. It provides a collection of commands which are designed to be composable into larger processing pipelines. The output of augur is a series of JSONs that can be used to visualize your results using [Auspice](https://github.com/nextstrain/auspice). ## Quickstart [Follow instructions to install Augur](https://docs.nextstrain.org/projects/augur/en/stable/installation/installation.html). Try out an analysis of real virus data by [completing the Zika tutorial](https://nextstrain.org/docs/tutorials/zika). ## Documentation * [Overview of how Augur fits together with other Nextstrain tools](https://docs.nextstrain.org/en/latest/learn/parts.html) * [Overview of Augur usage](https://docs.nextstrain.org/projects/augur/en/stable/usage/usage.html) * [Technical documentation for Augur](https://docs.nextstrain.org/projects/augur/en/stable/installation/installation.html) * [Contributor guide](https://github.com/nextstrain/.github/blob/master/CONTRIBUTING.md) * [Developer docs for Augur](./docs/contribute/DEV_DOCS.md) * [Changelog](./CHANGES.md) ## Citation Huddleston J, Hadfield J, Sibley TR, Lee J, Fay K, Ilcisin M, Harkins E, Bedford T, Neher RA, Hodcroft EB, (2021). Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens. Journal of Open Source Software, 6(57), 2906, https://doi.org/10.21105/joss.02906 ## License and copyright Copyright 2014-2022 Trevor Bedford and Richard Neher. Source code to Nextstrain is made available under the terms of the [GNU Affero General Public License](LICENSE.txt) (AGPL). Nextstrain is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details. augur-24.2.2/augur/000077500000000000000000000000001456376326500140705ustar00rootroot00000000000000augur-24.2.2/augur/__init__.py000066400000000000000000000071441456376326500162070ustar00rootroot00000000000000""" The top-level augur command which dispatches to subcommands. """ import argparse import os import sys import importlib import traceback from textwrap import dedent from types import SimpleNamespace from treetime import TreeTimeError, TreeTimeUnknownError from .errors import AugurError from .io.print import print_err from .argparse_ import add_command_subparsers, add_default_command DEFAULT_AUGUR_RECURSION_LIMIT = 10000 sys.setrecursionlimit(int(os.environ.get("AUGUR_RECURSION_LIMIT") or DEFAULT_AUGUR_RECURSION_LIMIT)) command_strings = [ "parse", "curate", "index", "filter", "mask", "align", "tree", "refine", "ancestral", "translate", "reconstruct_sequences", "clades", "traits", "sequence_traits", "lbi", "distance", "titers", "frequencies", "export", "validate", "version", "import_", "measurements", ] COMMANDS = [importlib.import_module('augur.' + c) for c in command_strings] def make_parser(): parser = argparse.ArgumentParser( prog = "augur", description = "Augur: A bioinformatics toolkit for phylogenetic analysis.") add_default_command(parser) add_version_alias(parser) subparsers = parser.add_subparsers() add_command_subparsers(subparsers, COMMANDS) return parser def run(argv): args = make_parser().parse_args(argv) try: return args.__command__.run(args) except AugurError as e: print_err(f"ERROR: {e}") sys.exit(2) except RecursionError: print_err("FATAL: Maximum recursion depth reached. You can set the env variable AUGUR_RECURSION_LIMIT to adjust this (current limit: {})".format(sys.getrecursionlimit())) sys.exit(2) except FileNotFoundError as e: print_err(f"ERROR: {e.strerror}: '{e.filename}'") sys.exit(2) except TreeTimeUnknownError as e: print_err(dedent("""\ ERROR from TreeTime: An error occurred in TreeTime (see above). This may be due to an issue with TreeTime or Augur. Please report you are calling TreeTime via Augur. """)) sys.exit(2) except TreeTimeError as e: print_err(f"ERROR: {e}") print_err("\n") print_err(dedent("""\ ERROR from TreeTime: This error is most likely due to a problem with your input data. Please check your input data and try again. If you continue to have problems, please open a new issue including the original command and the error above: """)) sys.exit(2) except Exception: traceback.print_exc(file=sys.stderr) print_err("\n") print_err(dedent("""\ An error occurred (see above) that has not been properly handled by Augur. To report this, please open a new issue including the original command and the error above: """)) sys.exit(2) def add_version_alias(parser): """ Add --version as a (hidden) alias for the version command. It's not uncommon to blindly run a command with --version as the sole argument, so its useful to make that Just Work. """ class run_version_command(argparse.Action): def __call__(self, *args, **kwargs): opts = SimpleNamespace() sys.exit( version.run(opts) ) # noqa: F821; This is imported from version_file. return parser.add_argument( "--version", nargs = 0, help = argparse.SUPPRESS, action = run_version_command) augur-24.2.2/augur/__main__.py000066400000000000000000000013501456376326500161610ustar00rootroot00000000000000""" Stub function and module used as a setuptools entry point. """ import sys import augur from sys import argv, exit # Entry point for setuptools-installed script and bin/augur dev wrapper. def main(): sys.stdout.reconfigure( # Support non-Unicode encodings by replacing Unicode characters instead of erroring. errors="backslashreplace", # Explicitly enable universal newlines mode so we do the right thing. newline=None, ) # Apply the above to stderr as well. sys.stderr.reconfigure( errors="backslashreplace", newline=None, ) return augur.run( argv[1:] ) # Run when called as `python -m augur`, here for good measure. if __name__ == "__main__": exit( main() ) augur-24.2.2/augur/__version__.py000066400000000000000000000010321456376326500167170ustar00rootroot00000000000000__version__ = '24.2.2' def is_augur_version_compatible(version): """ Checks if the provided **version** is the same major version as the currently running version of augur. Parameters ---------- version : str version to check against the current version Returns ------- Bool """ import packaging.version current_version = packaging.version.parse(__version__) this_version = packaging.version.parse(version) return this_version.release[0] == current_version.release[0] augur-24.2.2/augur/align.py000066400000000000000000000466551456376326500155540ustar00rootroot00000000000000""" Align multiple sequences from FASTA. """ import os from shutil import copyfile import numpy as np from Bio import AlignIO, SeqIO, Seq, Align from .io.file import open_file from .io.shell_command_runner import run_shell_command from .io.vcf import shquote from .utils import nthreads_value from collections import defaultdict class AlignmentError(Exception): # TODO: this exception should potentially be renamed and made augur-wide # thus allowing any module to raise it and have the message printed & augur # exit with code 1 pass def register_arguments(parser): """ Add arguments to parser. Kept as a separate function than `register_parser` to continue to support unit tests that use this function to create argparser. """ parser.add_argument('--sequences', '-s', required=True, nargs="+", metavar="FASTA", help="sequences to align") parser.add_argument('--output', '-o', default="alignment.fasta", help="output file (default: %(default)s)") parser.add_argument('--nthreads', type=nthreads_value, default=1, help="number of threads to use; specifying the value 'auto' will cause the number of available CPU cores on your system, if determinable, to be used") parser.add_argument('--method', default='mafft', choices=["mafft"], help="alignment program to use") parser.add_argument('--reference-name', metavar="NAME", type=str, help="strip insertions relative to reference sequence; use if the reference is already in the input sequences") parser.add_argument('--reference-sequence', metavar="PATH", type=str, help="Add this reference sequence to the dataset & strip insertions relative to this. Use if the reference is NOT already in the input sequences") parser.add_argument('--remove-reference', action="store_true", default=False, help="remove reference sequence from the alignment") parser.add_argument('--fill-gaps', action="store_true", default=False, help="If gaps represent missing data rather than true indels, replace by N after aligning.") parser.add_argument('--existing-alignment', metavar="FASTA", default=False, help="An existing alignment to which the sequences will be added. The ouput alignment will be the same length as this existing alignment.") parser.add_argument('--debug', action="store_true", default=False, help="Produce extra files (e.g. pre- and post-aligner files) which can help with debugging poor alignments.") def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("align", help=__doc__) register_arguments(parser) return parser def prepare(sequences, existing_aln_fname, output, ref_name, ref_seq_fname): """Prepare the sequences, existing alignment, and reference sequence for alignment. This function: 1. Combines all given input sequences into a single file 2. Checks to make sure the input sequences don't overlap with the existing alignment, if one exists. 3. If given a reference name, check that sequence exists in either the existing alignment, if given, or the input sequences. 4. If given a reference sequence, either add it to the existing alignment or prepend it to the input seqeunces. 5. Write the input sequences to a single file, and write the alignment back out if we added the reference sequence to it. Parameters ---------- sequences : list of str List of paths to FASTA-formatted sequences to align. existing_aln_fname : str Path of an existing alignment to use, or None output: str Path the aligned sequences will be written out to. ref_name: str The name of the reference sequence, if provided ref_seq_fname: str The path to the reference sequence file. If this is provided, it overrides ref_name. Returns ------- tuple of str The existing alignment filename, the new sequences filename, and the name of the reference sequence. """ seqs = read_sequences(*sequences) seqs_to_align_fname = output + ".to_align.fasta" if existing_aln_fname: existing_aln = read_alignment(existing_aln_fname) seqs = prune_seqs_matching_alignment(seqs, existing_aln) else: existing_aln = None if ref_seq_fname: ref_seq = read_reference(ref_seq_fname) ref_name = ref_seq.id if existing_aln: if len(ref_seq) != existing_aln.get_alignment_length(): raise AlignmentError("ERROR: Provided existing alignment ({}bp) is not the same length as the reference sequence ({}bp)".format(existing_aln.get_alignment_length(), len(ref_seq))) existing_aln_fname = existing_aln_fname + ".ref.fasta" existing_aln.append(ref_seq) write_seqs(existing_aln, existing_aln_fname) else: # reference sequence needs to be the first one for auto direction # adjustment (auto reverse-complement) seqs.insert(0, ref_seq) elif ref_name: ensure_reference_strain_present(ref_name, existing_aln, seqs) write_seqs(seqs, seqs_to_align_fname) # 90% sure this is only ever going to catch ref_seq was a dupe check_duplicates(existing_aln, seqs) return existing_aln_fname, seqs_to_align_fname, ref_name def run(args): ''' Parameters ---------- args : argparse.Namespace arguments passed in via the command-line from augur Returns ------- int returns 0 for success, 1 for general error ''' temp_files_to_remove = [] try: check_arguments(args) existing_aln_fname, seqs_to_align_fname, ref_name = prepare(args.sequences, args.existing_alignment, args.output, args.reference_name, args.reference_sequence) temp_files_to_remove.append(seqs_to_align_fname) if existing_aln_fname != args.existing_alignment: temp_files_to_remove.append(existing_aln_fname) # -- existing_aln_fname, seqs_to_align_fname, ref_name -- # before aligning, make a copy of the data that the aligner receives as input (very useful for debugging purposes) if args.debug and not existing_aln_fname: copyfile(seqs_to_align_fname, args.output+".pre_aligner.fasta") # generate alignment command & run log = args.output + ".log" cmd = generate_alignment_cmd(args.method, args.nthreads, existing_aln_fname, seqs_to_align_fname, args.output, log) success = run_shell_command(cmd) if not success: raise AlignmentError(f"Error during alignment: please see the log file {log!r} for more details") # after aligning, make a copy of the data that the aligner produced (useful for debugging) if args.debug: copyfile(args.output, args.output+".post_aligner.fasta") postprocess(args.output, ref_name, not args.remove_reference, args.fill_gaps) except AlignmentError as e: print(str(e)) return 1 # finally, remove any temporary files for fname in temp_files_to_remove: os.remove(fname) def postprocess(output_file, ref_name, keep_reference, fill_gaps): """Postprocessing of the combined alignment file. The modified alignment is written directly to output_file. Parameters ---------- output_file: str The file the new alignment was written to ref_name: str If provided, the name of the reference strain used in the alignment keep_reference: bool If the reference was provided, whether it should be kept in the alignment fill_gaps: bool Replace all gaps in the alignment with "N" to indicate ambiguous sites. """ # -- ref_name -- # reads the new alignment seqs = read_alignment(output_file) # convert the aligner output to upper case and remove auto reverse-complement prefix prettify_alignment(seqs) # if we've specified a reference, strip out all the columns not present in the reference # this will overwrite the alignment file if ref_name: seqs = strip_non_reference(seqs, ref_name, insertion_csv=output_file+".insertions.csv") if not keep_reference: seqs = remove_reference_sequence(seqs, ref_name) if fill_gaps: make_gaps_ambiguous(seqs) # write the modified sequences back to the alignment file write_seqs(seqs, output_file) ##################################################################################################### def read_sequences(*fnames): """return list of sequences from all fnames""" seqs = {} try: for fname in fnames: for record in SeqIO.parse(fname, 'fasta'): if record.name in seqs and record.seq != seqs[record.name].seq: raise AlignmentError("Detected duplicate input strains \"%s\" but the sequences are different." % record.name) # if the same sequence then we can proceed (and we only take one) seqs[record.name] = record except FileNotFoundError: raise AlignmentError("\nCannot read sequences -- make sure the file %s exists and contains sequences in fasta format" % fname) except ValueError as error: raise AlignmentError("\nERROR: Problem reading in {}: {}".format(fname, str(error))) return list(seqs.values()) def check_arguments(args): # Simple error checking related to a reference name/sequence if args.reference_name and args.reference_sequence: raise AlignmentError("ERROR: You cannot provide both --reference-name and --reference-sequence") if args.remove_reference and not (args.reference_name or args.reference_sequence): raise AlignmentError("ERROR: You've asked to remove the reference but haven't specified one!") def read_alignment(fname): try: return AlignIO.read(fname, 'fasta') except Exception as error: raise AlignmentError("\nERROR: Problem reading in {}: {}".format(fname, str(error))) def ensure_reference_strain_present(ref_name, existing_alignment, seqs): if existing_alignment: if ref_name not in {x.name for x in existing_alignment}: raise AlignmentError("ERROR: Specified reference name %s (via --reference-name) is not in the supplied alignment."%ref_name) else: if ref_name not in {x.name for x in seqs}: raise AlignmentError("ERROR: Specified reference name %s (via --reference-name) is not in the sequence sample."%ref_name) # align # if args.method=='mafft': # shoutput = shquote(output) # shname = shquote(seq_fname) # cmd = "mafft --reorder --anysymbol --thread %d %s 1> %s 2> %s.log"%(args.nthreads, shname, shoutput, shoutput) def read_reference(ref_fname): if not os.path.isfile(ref_fname): raise AlignmentError("ERROR: Cannot read reference sequence." "\n\tmake sure the file \"%s\" exists"%ref_fname) try: ref_seq = SeqIO.read(ref_fname, 'genbank' if ref_fname.split('.')[-1] in ['gb', 'genbank'] else 'fasta') except: raise AlignmentError("ERROR: Cannot read reference sequence." "\n\tmake sure the file %s contains one sequence in genbank or fasta format"%ref_fname) return ref_seq def generate_alignment_cmd(method, nthreads, existing_aln_fname, seqs_to_align_fname, aln_fname, log_fname): if method=='mafft': if existing_aln_fname: cmd = "mafft --add %s --keeplength --reorder --anysymbol --nomemsave --adjustdirection --thread %d %s 1> %s 2> %s"%(shquote(seqs_to_align_fname), nthreads, shquote(existing_aln_fname), shquote(aln_fname), shquote(log_fname)) else: cmd = "mafft --reorder --anysymbol --nomemsave --adjustdirection --thread %d %s 1> %s 2> %s"%(nthreads, shquote(seqs_to_align_fname), shquote(aln_fname), shquote(log_fname)) print("\nusing mafft to align via:\n\t" + cmd + " \n\n\tKatoh et al, Nucleic Acid Research, vol 30, issue 14" "\n\thttps://doi.org/10.1093%2Fnar%2Fgkf436\n") else: raise AlignmentError('ERROR: alignment method %s not implemented'%method) return cmd def remove_reference_sequence(seqs, reference_name): return [seq for seq in seqs if seq.name!=reference_name] def strip_non_reference(aln, reference, insertion_csv=None): ''' return sequences that have all insertions relative to the reference removed. The aligment is returned as list of sequences. Parameters ---------- aln : Bio.Align.MultipleSeqAlignment Biopython Alignment reference : str name of reference sequence, assumed to be part of the alignment Returns ------- list list of trimmed sequences, effectively a multiple alignment Examples -------- >>> [s.name for s in strip_non_reference(read_alignment("tests/data/align/test_aligned_sequences.fasta"), "with_gaps")] Trimmed gaps in with_gaps from the alignment ['with_gaps', 'no_gaps', 'some_other_seq', '_R_crick_strand'] >>> [s.name for s in strip_non_reference(read_alignment("tests/data/align/test_aligned_sequences.fasta"), "no_gaps")] No gaps in alignment to trim (with respect to the reference, no_gaps) ['with_gaps', 'no_gaps', 'some_other_seq', '_R_crick_strand'] >>> [s.name for s in strip_non_reference(read_alignment("tests/data/align/test_aligned_sequences.fasta"), "missing")] Traceback (most recent call last): ... augur.align.AlignmentError: ERROR: reference missing not found in alignment ''' seqs = {s.name:s for s in aln} if reference in seqs: ref_array = np.array(seqs[reference]) if "-" not in ref_array: print("No gaps in alignment to trim (with respect to the reference, %s)"%reference) ungapped = ref_array!='-' ref_aln_array = np.array(aln)[:,ungapped] else: raise AlignmentError("ERROR: reference %s not found in alignment"%reference) if False in ungapped and insertion_csv: analyse_insertions(aln, ungapped, insertion_csv) out_seqs = [] for seq, seq_array in zip(aln, ref_aln_array): seq.seq = Seq.Seq(''.join(seq_array)) out_seqs.append(seq) if "-" in ref_array: print("Trimmed gaps in", reference, "from the alignment") return out_seqs def analyse_insertions(aln, ungapped, insertion_csv): ## Gather groups (runs) of insertions: insertion_coords = [] # python syntax - e.g. [0, 3, 5] means indexes 0,1 & 2 are insertions (w.r.t. ref), to the right of 0-based ref pos 5 _open_idx = False _ref_idx = -1 for i, in_ref in enumerate(ungapped): if not in_ref and _open_idx is False: _open_idx = i # insertion run start elif in_ref and _open_idx is not False: insertion_coords.append([_open_idx, i, _ref_idx])# insertion run has finished _open_idx = False if in_ref: _ref_idx += 1 if _open_idx is not False: insertion_coords.append([_open_idx, len(ungapped), _ref_idx]) # For each run of insertions (w.r.t. reference) collect the insertions we have insertions = [defaultdict(list) for ins in insertion_coords] for idx, insertion_coord in enumerate(insertion_coords): for seq in aln: try: # biopython>=1.80 does not have seq.ungap() s = (seq[insertion_coord[0]:insertion_coord[1]].seq .replace("-", "") .replace("N", "") .replace("?", "") ) except AttributeError: # biopython<1.79 does not have seq.replace() s = (seq[insertion_coord[0]:insertion_coord[1]].seq .ungap("-") .ungap("N") .ungap("?") ) if len(s): insertions[idx][str(s)].append(seq.name) for insertion_coord, data in zip(insertion_coords, insertions): # GFF is 1-based & insertions are to the right of the base. print("{}bp insertion at ref position {}".format(insertion_coord[1]-insertion_coord[0], insertion_coord[2]+1)) for k, v in data.items(): print("\t{}: {}".format(k, ", ".join(v))) if not len(data.keys()): # This happens when there _is_ an insertion, but it's an insertion of gaps # We know that these are associated with poor alignments... print("\tWARNING: this insertion was caused due to 'N's or '?'s in provided sequences") # output for auspice drag&drop -- GFF is 1-based & insertions are to the right of the base. header = ["strain"]+["insertion: {}bp @ ref pos {}".format(ic[1]-ic[0], ic[2]+1) for ic in insertion_coords] strain_data = defaultdict(lambda: ["" for _ in range(0, len(insertion_coords))]) for idx, i_data in enumerate(insertions): for insertion_seq, strains in i_data.items(): for strain in strains: strain_data[strain][idx] = insertion_seq with open_file(insertion_csv, 'w') as fh: print(",".join(header), file=fh) for strain in strain_data: print("{},{}".format(strain, ",".join(strain_data[strain])), file=fh) def prettify_alignment(aln): ''' Converts all bases to uppercase and removes auto reverse-complement prefix (_R_). This modifies the alignment in place. Parameters ---------- aln : Bio.Align.MultipleSeqAlignment Biopython Alignment ''' for seq in aln: seq.seq = seq.seq.upper() # AlignIO.read repeats the ID in the name and description field if seq.id.startswith("_R_"): seq.id = seq.id[3:] print("Sequence \"{}\" was reverse-complemented by the alignment program.".format(seq.id)) if seq.name.startswith("_R_"): seq.name = seq.name[3:] if seq.description.startswith("_R_"): seq.description = seq.description[3:] def make_gaps_ambiguous(aln): ''' replace all gaps by 'N' in all sequences in the alignment. TreeTime will treat them as fully ambiguous and replace then with the most likely state. This modifies the alignment in place. Parameters ---------- aln : Bio.Align.MultipleSeqAlignment Biopython Alignment ''' for seq in aln: _seq = str(seq.seq) _seq = _seq.replace('-', 'N') seq.seq = Seq.Seq(_seq) def check_duplicates(*values): names = set() def add(name): if name in names: raise AlignmentError("Duplicate strains of \"{}\" detected".format(name)) names.add(name) for sample in values: if not sample: # allows false-like values (e.g. always provide existing_alignment, allowing # the default which is `False`) continue elif isinstance(sample, (list, Align.MultipleSeqAlignment)): for s in sample: add(s.name) elif isinstance(sample, str): add(sample) else: raise TypeError() def write_seqs(seqs, fname): """A wrapper around SeqIO.write with error handling""" try: SeqIO.write(seqs, fname, 'fasta') except FileNotFoundError: raise AlignmentError('ERROR: Couldn\'t write "{}" -- perhaps the directory doesn\'t exist?'.format(fname)) def prune_seqs_matching_alignment(seqs, aln): """ Return a set of seqs excluding those already in the alignment & print a warning message for each sequence which is exluded. """ ret = [] aln_names = {s.name for s in aln} for seq in seqs: if seq.name in aln_names: print("Excluding {} as it is already present in the alignment".format(seq.name)) else: ret.append(seq) return ret augur-24.2.2/augur/ancestral.py000066400000000000000000000566261456376326500164350ustar00rootroot00000000000000""" Infer ancestral sequences based on a tree. The ancestral sequences are inferred using `TreeTime `_. Each internal node gets assigned a nucleotide sequence that maximizes a likelihood on the tree given its descendants and its parent node. Each node then gets assigned a list of nucleotide mutations for any position that has a mismatch between its own sequence and its parent's sequence. The node sequences and mutations are output to a node-data JSON file. If amino acid options are provided, the ancestral amino acid sequences for each requested gene are inferred with the same method as the nucleotide sequences described above. The inferred amino acid mutations will be included in the output node-data JSON file, with the format equivalent to the output of `augur translate`. The nucleotide and amino acid sequences are inferred separately in this command, which can potentially result in mismatches between the nucleotide and amino acid mutations. If you want amino acid mutations based on the inferred nucleotide sequences, please use `augur translate`. .. note:: The mutation positions in the node-data JSON are one-based. """ from augur.errors import AugurError import sys import numpy as np from Bio import SeqIO from Bio.Seq import Seq from Bio.SeqRecord import SeqRecord from .utils import parse_genes_argument, read_tree, InvalidTreeError, write_json, get_json_name from .io.file import open_file from .io.vcf import is_vcf as is_filename_vcf from treetime.vcf_utils import read_vcf, write_vcf from collections import defaultdict def ancestral_sequence_inference(tree=None, aln=None, ref=None, infer_gtr=True, marginal=False, fill_overhangs=True, infer_tips=False, alphabet='nuc'): """infer ancestral sequences using TreeTime Parameters ---------- tree : Bio.Phylo.BaseTree.Tree or str tree or filename of tree aln : Bio.Align.MultipleSeqAlignment or str alignment or filename of alignment ref : str, optional reference sequence to pass to TreeTime's TreeAnc class infer_gtr : bool, optional Description marginal : bool, optional Description fill_overhangs : bool In some cases, the missing data on both ends of the alignment is filled with the gap character ('-'). If set to True, these end-gaps are converted to "ambiguous" characters ('N' for nucleotides, 'X' for aminoacids). Otherwise, the alignment is treated as-is infer_tips : bool Since v0.7, TreeTime does not reconstruct tip states by default. This is only relevant when tip-state are not exactly specified, e.g. via characters that signify ambiguous states. To replace those with the most-likely state, set infer_tips=True alphabet : str alphabet to use for ancestral sequence inference. Default is the nucleotide alphabet that included a gap character 'nuc'. Alternative is `aa` for amino acids. Returns ------- treetime.TreeAnc treetime.TreeAnc instance """ from treetime import TreeAnc tt = TreeAnc(tree=tree, aln=aln, ref=ref, gtr='JC69', alphabet=alphabet, fill_overhangs=fill_overhangs, verbose=1) # convert marginal (from args.inference) from 'joint' or 'marginal' to True or False bool_marginal = (marginal == "marginal") # only infer ancestral sequences, leave branch length untouched tt.infer_ancestral_sequences(infer_gtr=infer_gtr, marginal=bool_marginal, reconstruct_tip_states=infer_tips) return tt def create_mask(is_vcf, tt, reference_sequence, aln): """ Identify sites for which every terminal sequence is ambiguous. These sites will be masked to prevent rounding errors in the maximum likelihood inference from assigning an arbitrary nucleotide to sites at internal nodes. Parameters ---------- is_vcf : bool tt : treetime.TreeTime instance of treetime with valid ancestral reconstruction. Unused if is_vcf. reference_sequence : str only used if is_vcf aln : dict describes variation (relative to reference) per sample. Only used if is_vcf. Returns ------- numpy.ndarray(bool) """ num_tips = len(tt.tree.get_terminals()) ambiguous_count = np.zeros(tt.sequence_length, dtype=int) if is_vcf: variable_sites = set() # VCF ambiguous positions come in two forms: # Firstly, if VCF defines a "N" ALT and assigns it to every sample: for sample_data in aln.values(): ambig_positions = [] for pos, alt in sample_data.items(): variable_sites.add(pos) if alt=='N': ambig_positions.append(pos) # ambig_positions = [pos for pos, alt in sample_data.items() if alt=='N'] np.add.at(ambiguous_count, ambig_positions, 1) # Secondly, if the VCF defines no mutations but the ref is "N": no_info_sites = np.array(list(reference_sequence)) == 'N' no_info_sites[list(variable_sites)] = False # and the mask is the union of these two forms mask = ambiguous_count==num_tips mask[no_info_sites] = True else: for n in tt.tree.get_terminals(): ambiguous_count += np.array(tt.sequence(n,reconstructed=False, as_string=False)==tt.gtr.ambiguous, dtype=int) mask = ambiguous_count==num_tips return mask def collect_mutations(tt, mask, character_map=None, reference_sequence=None, infer_ambiguous=False): """iterates of the tree and produces dictionaries with mutations and sequences for each node. If a reference sequence is provided then mutations can be collected for the root node. Masked positions at the root-node will be treated specially: if we infer ambiguity, then we report no mutations (i.e. we assume the reference base holds), otherwise we'll report a mutation from the to "N". Parameters ---------- tt : treetime.TreeTime instance of treetime with valid ancestral reconstruction mask : numpy.ndarray(bool) character_map : None, optional optional dictionary to map characters to a custom set. reference_sequence : str, optional Returns ------- dict dict -> -> [mut, mut, ...] where mut is a string in the form <1-based-pos> """ if character_map is None: cm = lambda x:x else: cm = lambda x: character_map.get(x, x) data = {} inc = 1 # convert python numbering to start-at-1 # Note that for mutations reported across the tree we don't have to consider # the mask, because while sites which are all Ns may have an inferred base, # there will be no variablity and thus no mutations. for n in tt.tree.find_clades(): data[n.name] = [a+str(int(pos)+inc)+cm(d) for a,pos,d in n.mutations] if reference_sequence: data[tt.tree.root.name] = [] for pos, (root_state, tree_state) in enumerate(zip(reference_sequence, tt.sequence(tt.tree.root, reconstructed=infer_ambiguous, as_string=True))): if mask[pos] and infer_ambiguous: continue if root_state != tree_state: data[tt.tree.root.name].append(f"{root_state}{pos+1}{tree_state}") return data def collect_sequences(tt, mask, reference_sequence=None, infer_ambiguous=False): """ Create a full sequence for every node on the tree. Masked positions will have the reference base if we are inferring ambiguity, or the ambiguous character 'N'. Parameters ---------- tt : treetime.TreeTime instance of treetime with valid ancestral reconstruction mask : numpy.ndarray(bool) Mask these positions by changing them to the ambiguous nucleotide reference_sequence : str or None infer_ambiguous : bool, optional if true, request the reconstructed sequences from treetime, otherwise retain input ambiguities Returns ------- dict dict -> -> sequence_string """ sequences = {} ref_mask = None if reference_sequence and infer_ambiguous: ref_mask = np.array(list(reference_sequence))[mask] for n in tt.tree.find_clades(): try: tmp = tt.sequence(n,reconstructed=infer_ambiguous, as_string=False) if ref_mask is not None: tmp[mask] = ref_mask else: tmp[mask] = tt.gtr.ambiguous sequences[n.name] = "".join(tmp) except: print("No sequence available for node ",n.name) return sequences def run_ancestral(T, aln, reference_sequence=None, is_vcf=False, full_sequences=False, fill_overhangs=False, infer_ambiguous=False, marginal=False, alphabet='nuc'): """ ancestral nucleotide reconstruction using TreeTime """ tt = ancestral_sequence_inference(tree=T, aln=aln, ref=reference_sequence if is_vcf else None, marginal=marginal, fill_overhangs = fill_overhangs, alphabet=alphabet, infer_tips = infer_ambiguous) character_map = {} for x in tt.gtr.profile_map: if tt.gtr.profile_map[x].sum()==tt.gtr.n_states: # TreeTime treats all characters that are not valid IUPAC nucleotide chars as fully ambiguous # To clean up auspice output, we map all those to 'N' character_map[x] = 'N' else: character_map[x] = x # add reference sequence to json structure. This is the sequence with # respect to which mutations on the tree are defined. if reference_sequence: root_seq = reference_sequence else: root_seq = tt.sequence(T.root, as_string=True) mask = create_mask(is_vcf, tt, reference_sequence, aln) mutations = collect_mutations(tt, mask, character_map, reference_sequence, infer_ambiguous) sequences = {} if full_sequences: sequences = collect_sequences(tt, mask, reference_sequence, infer_ambiguous) # Combine the mutations & sequences into a single dict which downstream code # expects nodes = defaultdict(dict) for n in tt.tree.find_clades(): name = n.name if name in mutations: nodes[name]['muts'] = mutations[name] if name in sequences: nodes[name]['sequence'] = sequences[name] return {'tt': tt, 'root_seq': root_seq, 'mutations': {"nodes": nodes, "mask": mask}} def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("ancestral", help=__doc__) input_group = parser.add_argument_group( "inputs", "Tree and sequences to use for ancestral reconstruction" ) input_group.add_argument('--tree', '-t', required=True, help="prebuilt Newick") input_group.add_argument('--alignment', '-a', help="alignment in FASTA or VCF format") input_group_ref = input_group.add_mutually_exclusive_group() input_group_ref.add_argument('--vcf-reference', type=str, metavar='FASTA', help='[VCF alignment only] file of the sequence the VCF was mapped to.' ' Differences between this sequence and the inferred root will be reported as mutations on the root branch.') input_group_ref.add_argument('--root-sequence', type=str,metavar='FASTA/GenBank', help='[FASTA alignment only] file of the sequence that is used as root for mutation calling.' ' Differences between this sequence and the inferred root will be reported as mutations on the root branch.') global_options_group = parser.add_argument_group( "global options", "Options to configure reconstruction of both nucleotide and amino acid sequences" ) global_options_group.add_argument('--inference', default='joint', choices=["joint", "marginal"], help="calculate joint or marginal maximum likelihood ancestral sequence states") nucleotide_options_group = parser.add_argument_group( "nucleotide options", "Options to configure reconstruction of ancestral nucleotide sequences" ) ambiguous = nucleotide_options_group.add_mutually_exclusive_group() ambiguous.add_argument('--keep-ambiguous', action="store_true", help='do not infer nucleotides at ambiguous (N) sites on tip sequences (leave as N).') ambiguous.add_argument('--infer-ambiguous', action="store_true", default=True, help='infer nucleotides at ambiguous (N,W,R,..) sites on tip sequences and replace with most likely state.') nucleotide_options_group.add_argument('--keep-overhangs', action="store_true", default=False, help='do not infer nucleotides for gaps (-) on either side of the alignment') amino_acid_options_group = parser.add_argument_group( "amino acid options", "Options to configure reconstruction of ancestral amino acid sequences. All arguments are required for ancestral amino acid sequence reconstruction." ) amino_acid_options_group.add_argument('--annotation', help='GenBank or GFF file containing the annotation') amino_acid_options_group.add_argument('--genes', nargs='+', help="genes to translate (list or file containing list)") amino_acid_options_group.add_argument('--translations', type=str, help="translated alignments for each CDS/Gene. " "Currently only supported for FASTA-input. Specify the file name via a " "template like 'aa_sequences_%%GENE.fasta' where %%GENE will be replaced " "by the gene name.") output_group = parser.add_argument_group( "outputs", "Outputs supported for reconstructed ancestral sequences" ) output_group.add_argument('--output-node-data', type=str, help='name of JSON file to save mutations and ancestral sequences to') output_group.add_argument('--output-sequences', type=str, help='name of FASTA file to save ancestral nucleotide sequences to (FASTA alignments only)') output_group.add_argument('--output-translations', type=str, help="name of the FASTA file(s) to save ancestral amino acid sequences to. " "Specify the file name via a template like 'ancestral_aa_sequences_%%GENE.fasta' where %%GENE will be replaced by" "the gene name.") output_group.add_argument('--output-vcf', type=str, help='name of output VCF file which will include ancestral seqs') return parser def validate_arguments(args, is_vcf): """ Check that provided arguments are compatible. Where possible we use argparse built-ins, but they don't cover everything we want to check. This checking shouldn't be used by downstream code to assume arguments exist, however by checking for invalid combinations up-front we can exit quickly. """ aa_arguments = (args.annotation, args.genes, args.translations) if any(aa_arguments) and not all(aa_arguments): raise AugurError("For amino acid sequence reconstruction, you must provide an annotation file, a list of genes, and a template path to amino acid sequences.") if args.output_sequences and args.output_vcf: raise AugurError("Both sequence (fasta) and VCF output have been requested, but these are incompatible.") if is_vcf and args.output_sequences: raise AugurError("Sequence (fasta) output has been requested but the input alignment is VCF.") if not is_vcf and args.output_vcf: raise AugurError("VCF output has been requested but the input alignment is not VCF.") def run(args): # check alignment type, set flags, read in if VCF is_vcf = is_filename_vcf(args.alignment) ref = None validate_arguments(args, is_vcf) try: T = read_tree(args.tree) except FileNotFoundError: raise AugurError(f"The provided tree file {args.tree!r} doesn't exist") except InvalidTreeError as error: raise AugurError(error) # Note that a number of other errors may be thrown by `read_tree` such as Bio.Phylo.NewickIO.NewickError import numpy as np missing_internal_node_names = [n.name is None for n in T.get_nonterminals()] if np.all(missing_internal_node_names): print("\n*** WARNING: Tree has no internal node names!", file=sys.stderr) print("*** Without internal node names, ancestral sequences can't be linked up to the correct node later.", file=sys.stderr) print("*** If you want to use 'augur export' or `augur translate` later, re-run this command with the output of 'augur refine'.", file=sys.stderr) print("*** If you haven't run 'augur refine', you can add node names to your tree by running:", file=sys.stderr) print("*** augur refine --tree %s --output-tree .nwk"%(args.tree) , file=sys.stderr) print("*** And use .nwk as the tree when running 'ancestral', 'translate', and 'traits'", file=sys.stderr) if is_vcf: if not args.vcf_reference: raise AugurError("a reference Fasta is required with VCF-format alignments") compress_seq = read_vcf(args.alignment, args.vcf_reference) aln = compress_seq['sequences'] ref = compress_seq['reference'] vcf_metadata = compress_seq['metadata'] else: aln = args.alignment ref = None if args.root_sequence: for fmt in ['fasta', 'genbank']: try: ref = str(SeqIO.read(args.root_sequence, fmt).seq).upper() break except: pass if ref is None: raise AugurError(f"could not read root sequence from {args.root_sequence}") import treetime print("\nInferred ancestral sequence states using TreeTime:" "\n\tSagulenko et al. TreeTime: Maximum-likelihood phylodynamic analysis" "\n\tVirus Evolution, vol 4, https://academic.oup.com/ve/article/4/1/vex042/4794731\n") print(f"augur ancestral is using TreeTime version {treetime.version}") # Infer ambiguous bases if the user has requested that we infer them (either # explicitly or by default) and the user has not explicitly requested that # we keep them. infer_ambiguous = args.infer_ambiguous and not args.keep_ambiguous full_sequences = not is_vcf nuc_result = run_ancestral(T, aln, reference_sequence=ref if ref else None, is_vcf=is_vcf, fill_overhangs=not args.keep_overhangs, full_sequences=full_sequences, marginal=args.inference, infer_ambiguous=infer_ambiguous, alphabet='nuc') anc_seqs = nuc_result['mutations'] anc_seqs['reference'] = {'nuc': nuc_result['root_seq']} if anc_seqs.get("mask") is not None: anc_seqs["mask"] = "".join(['1' if x else '0' for x in anc_seqs["mask"]]) anc_seqs['annotations'] = {'nuc': {'start': 1, 'end': len(anc_seqs['reference']['nuc']), 'strand': '+', 'type': 'source'}} if not is_vcf and args.genes: genes = parse_genes_argument(args.genes) from .utils import load_features ## load features; only requested features if genes given features = load_features(args.annotation, genes) # Ensure the already-created nuc annotation coordinates match those parsed from the reference file if (features['nuc'].location.start+1 != anc_seqs['annotations']['nuc']['start'] or features['nuc'].location.end != anc_seqs['annotations']['nuc']['end']): raise AugurError(f"The 'nuc' annotation coordinates parsed from {args.annotation!r} ({features['nuc'].location.start+1}..{features['nuc'].location.end})" f" don't match the provided sequence data coordinates ({anc_seqs['annotations']['nuc']['start']}..{anc_seqs['annotations']['nuc']['end']}).") print("Read in {} features from reference sequence file".format(len(features))) for gene in genes: print(f"Processing gene: {gene}") fname = args.translations.replace("%GENE", gene) feat = features[gene] reference_sequence = str(feat.extract(Seq(ref)).translate()) if ref else None aa_result = run_ancestral(T, fname, reference_sequence=reference_sequence, is_vcf=is_vcf, fill_overhangs=not args.keep_overhangs, marginal=args.inference, infer_ambiguous=infer_ambiguous, alphabet='aa') if aa_result['tt'].data.full_length*3 != len(feat): raise AugurError(f"length of translated alignment for {gene} does not match length of reference feature." " Please make sure that the annotation matches the translations.") for key, node in anc_seqs['nodes'].items(): if 'aa_muts' not in node: node['aa_muts'] = {} node['aa_muts'][gene] = aa_result['mutations']['nodes'][key]['muts'] # Add amino acid sequences to the root node of the tree. if key == T.root.name: if "aa_sequences" not in node: node["aa_sequences"] = {} node["aa_sequences"][gene] = aa_result['tt'].sequence(T.root, as_string=True, reconstructed=True) anc_seqs['reference'][gene] = aa_result['root_seq'] # FIXME: Note that this is calculating the end of the CDS as 3*length of translation # this is equivalent to the annotation for single segment CDS, but not for cds # with splicing and slippage. But auspice can't handle the latter at the moment. anc_seqs['annotations'][gene] = {'seqid':args.annotation, 'type':feat.type, 'start': int(feat.location.start)+1, 'end': int(feat.location.start) + 3*len(anc_seqs['reference'][gene]), 'strand': {+1:'+', -1:'-', 0:'?', None:None}[feat.location.strand]} # Save ancestral amino acid sequences to FASTA. if args.output_translations: with open_file(args.output_translations.replace("%GENE", gene), "w") as oh: for node in aa_result["tt"].tree.find_clades(): oh.write(f">{node.name}\n{aa_result['tt'].sequence(node, as_string=True, reconstructed=True)}\n") out_name = get_json_name(args, '.'.join(args.alignment.split('.')[:-1]) + '_mutations.json') write_json(anc_seqs, out_name) print("ancestral mutations written to", out_name, file=sys.stdout) if args.output_sequences: assert not is_vcf records = [ SeqRecord(Seq(node_data["sequence"]), id=node_name, description="") for node_name, node_data in anc_seqs["nodes"].items() ] SeqIO.write(records, args.output_sequences, "fasta") print("ancestral sequences FASTA written to", args.output_sequences, file=sys.stdout) # output VCF including new ancestral seqs if args.output_vcf: assert is_vcf tree_dict = nuc_result['tt'].get_tree_dict(keep_var_ambigs=not infer_ambiguous) tree_dict['metadata'] = vcf_metadata write_vcf(tree_dict, args.output_vcf, anc_seqs['mask']) print("Mutations, including for ancestral nodes, exported as VCF to", args.output_vcf, file=sys.stdout) return 0 augur-24.2.2/augur/argparse_.py000066400000000000000000000057131456376326500164130ustar00rootroot00000000000000""" Custom helpers for the argparse standard library. """ from argparse import Action, ArgumentDefaultsHelpFormatter # Include this in an argument help string to suppress the automatic appending # of the default value by argparse.ArgumentDefaultsHelpFormatter. This works # because the automatic appending is conditional on the presence of %(default), # so we include it but then format it as a zero-length string .0s. 🙃 # # Another solution would be to add an extra attribute to the argument (the # argparse.Action instance) and then subclass ArgumentDefaultsHelpFormatter to # condition on that new attribute, but that seems more brittle. # # Copied from the Nextstrain CLI repo # https://github.com/nextstrain/cli/blob/017c53805e8317951327d24c04184615cc400b09/nextstrain/cli/argparse.py#L13-L21 SKIP_AUTO_DEFAULT_IN_HELP = "%(default).0s" def add_default_command(parser): """ Sets the default command to run when none is provided. """ class default_command(): def run(args): parser.print_help() return 2 parser.set_defaults(__command__ = default_command) def add_command_subparsers(subparsers, commands, command_attribute='__command__'): """ Add subparsers for each command module. Parameters ---------- subparsers: argparse._SubParsersAction The special subparsers action object created by the parent parser via `parser.add_subparsers()`. commands: list[ModuleType] A list of modules that are commands that require their own subparser. Each module is required to have a `register_parser` function to add its own subparser and arguments. command_attribute: str, optional Optional attribute name for the commands. The default is `__command__`, which allows top level augur to run commands directly via `args.__command__.run()`. """ for command in commands: # Allow each command to register its own subparser subparser = command.register_parser(subparsers) # Add default attribute for command module if command_attribute: subparser.set_defaults(**{command_attribute: command}) # Use the same formatting class for every command for consistency. # Set here to avoid repeating it in every command's register_parser(). subparser.formatter_class = ArgumentDefaultsHelpFormatter if not subparser.description and command.__doc__: subparser.description = command.__doc__ # If a command doesn't have its own run() function, then print its help when called. if not getattr(command, "run", None): add_default_command(subparser) class HideAsFalseAction(Action): """ Custom argparse Action that stores False for arguments passed as `--hide*` and stores True for all other argument patterns. """ def __call__(self, parser, namespace, values, option_string=None): setattr(namespace, self.dest, option_string[2:6] != 'hide') augur-24.2.2/augur/clades.py000066400000000000000000000375761456376326500157170ustar00rootroot00000000000000""" Assign clades to nodes in a tree based on amino-acid or nucleotide signatures. Nodes which are members of a clade are stored via → nodes → → clade_membership and if this file is used in `augur export v2` these will automatically become a coloring. The basal nodes of each clade are also given a branch label which is stored via → branches → → labels → clade. The keys "clade_membership" and "clade" are customisable via command line arguments. """ import sys from Bio import Phylo import pandas as pd import numpy as np from collections import defaultdict import networkx as nx from itertools import islice from .errors import AugurError from .io.file import PANDAS_READ_CSV_OPTIONS from argparse import SUPPRESS from .utils import get_parent_name_by_child_name_for_tree, read_node_data, write_json, get_json_name UNASSIGNED = 'unassigned' def read_in_clade_definitions(clade_file): ''' Reads in tab-seperated file that defines clades by amino acid or nucleotide mutations Inheritance is allowed, but needs to be acyclic. Alleles can be overwritten by inheriting clades. Sites are 1 indexed in the file, and are converted to 0 indexed in the output Empty lines are ignored, comments after # are ignored Format:: clade gene site alt Clade_1 ctpE 81 D Clade_2 nuc 30642 T Clade_3 nuc 444296 A Clade_3 S 1 P # Clade_4 inherits from Clade_3 Clade_4 clade Clade_3 Clade_4 pks8 634 T # Inherited allele can be overwritten Clade_4 S 1 L Parameters ---------- clade_file : str meta data file Returns ------- dict clade definitions as :code:`{clade_name:[(gene, site, allele),...]}` ''' clades = defaultdict(lambda: defaultdict(str)) df = pd.read_csv( clade_file, sep='\t' if clade_file.endswith('.tsv') else ',', comment='#', na_filter=False, **PANDAS_READ_CSV_OPTIONS, ) clade_inheritance_rows = df[df['gene'] == 'clade'] # Identify clades that inherit more than once clades_with_multiple_inheritance = clade_inheritance_rows[clade_inheritance_rows.duplicated(subset=["clade"])]['clade'].tolist() if len(clades_with_multiple_inheritance) > 0: raise ValueError(f"Clades {clades_with_multiple_inheritance} have multiple inheritance, that's not allowed") # Identify clades that inherit from non-existent clades missing_parent_clades = set(clade_inheritance_rows['site']) - set(df["clade"]) if len(missing_parent_clades) > 0: raise ValueError(f"Clades {missing_parent_clades} are inherited from but are not defined") G = nx.DiGraph() # Use integer 0 as root so as not to conflict with any string clade names # String '0' can still be used this way root = 0 # Skip rows that are missing a clade name. defined_clades = (clade for clade in df.clade.unique() if clade != '') # For every clade, add edge from root as default # This way all clades can be reached by traversal for clade in defined_clades: G.add_edge(root, clade) # Build inheritance graph # For clades that inherit, disconnect from root # Add edge from parent for _, row in clade_inheritance_rows.iterrows(): G.remove_edge(root, row.clade) G.add_edge(row.site, row.clade) if not nx.is_directed_acyclic_graph(G): raise ValueError(f"Clade definitions contain cycles {list(nx.simple_cycles(G))}") # Traverse graph top down, so that children can inherit from parents and grandparents # Topological sort ensures parents are visited before children # islice is used to skip the root node (which has no parent) for clade in islice(nx.topological_sort(G),1,None): # Get name of parent clade # G.predecessors(clade) returns iterator, thus next() necessary # despite the fact that there should only be one parent parent_clade = next(G.predecessors(clade)) # Inheritance from parents happens here # Allele dict is initialized with alleles from parent clades[clade] = clades[parent_clade].copy() for _, row in df[(df.clade == clade) & (df.gene != 'clade')].iterrows(): # Overwrite of parent alleles is possible and happens here clades[clade][(row.gene, int(row.site)-1)] = row.alt # Convert items from dict[str, dict[(str,int),str]] to dict[str, list[(str,int,str)]] clades = { clade: [ gene_site + (alt,) for gene_site, alt in clade_definition.items() ] for clade, clade_definition in clades.items() # If clause avoids root (helper) from being emmitted if clade != root } if not len(clades.keys()): raise AugurError(f"No clades were defined in {clade_file}") return clades def is_node_in_clade(clade_alleles, node, root_sequence): ''' Determines whether a node matches the clade definition based on sequence For any condition, will first look in mutations stored in node.sequences, then check whether a reference sequence is available, and other reports 'non-match' Parameters ---------- clade_alleles : list list of clade defining alleles (typically supplied from the input TSV) node : Bio.Phylo.BaseTree.Clade node to check, assuming sequences (as mutations) are attached to node node.sequences specifies nucleotides/codons which are newly observed on this node i.e. they are the result of a mutation observed on the branch leading to this node root_sequence : dict {geneName: observed root sequence (list)} Returns ------- bool True if in clade ''' conditions = [] for gene, pos, clade_state in clade_alleles: if gene in node.sequences and pos in node.sequences[gene]: state = node.sequences[gene][pos] elif root_sequence and gene in root_sequence: try: state = root_sequence[gene][pos] except IndexError: raise AugurError(f"A clade definition specifies {{{gene},{pos+1},{clade_state}}} which \ is beyond the bounds of the supplied root sequence for {gene} (length {len(root_sequence[gene])})") else: state = '' conditions.append(state==clade_state) return all(conditions) def ensure_no_multiple_mutations(all_muts): multiples = [] for name,node in all_muts.items(): nt_positions = [int(mut[1:-1])-1 for mut in node.get('muts', [])] if len(set(nt_positions))!=len(nt_positions): multiples.append(f"Node {name} (nuc)") for gene in node.get('aa_muts', {}): aa_positions = [int(mut[1:-1])-1 for mut in node['aa_muts'][gene]] if len(set(aa_positions))!=len(aa_positions): multiples.append(f"Node {name} ({gene})") if multiples: raise AugurError(f"Multiple mutations at the same position on a single branch were found: {', '.join(multiples)}") def assign_clades(clade_designations, all_muts, tree, ref=None): ''' Ensures all nodes have an entry (or auspice doesn't display nicely), tests each node to see if it's the first member of a clade (this is the label), and sets the membership of each node to the value of their parent. This will change if later found to be the first member of a clade. Parameters ---------- clade_designations : dict clade definitions as :code:`{clade_name:[(gene, site, allele),...]}` all_muts : dict mutations in each node tree : Bio.Phylo.BaseTree.Tree phylogenetic tree to process ref : str or list, optional reference sequence to look up state when not mutated Returns ------- (dict, dict) [0]: mapping of node to clade membership (where applicable) [1]: mapping of node to clade label (where applicable) ''' clade_membership = {} clade_labels = {} parents = get_parent_name_by_child_name_for_tree(tree) # first pass to set all nodes to unassigned as precaution to ensure attribute is set for node in tree.find_clades(order = 'preorder'): clade_membership[node.name] = UNASSIGNED # count leaves for node in tree.find_clades(order = 'postorder'): node.leaf_count = 1 if node.is_terminal() else np.sum([c.leaf_count for c in node]) for node in tree.get_nonterminals(): for c in node: c.up=node tree.root.up = None tree.root.sequences = {'nuc':{}} tree.root.sequences.update({gene:{} for gene in all_muts.get(tree.root.name, {}).get('aa_muts', {})}) # attach sequences to all nodes for node in tree.find_clades(order='preorder'): if node.up: node.sequences = {gene:muts.copy() for gene, muts in node.up.sequences.items()} for mut in all_muts.get(node.name, {}).get('muts', []): a, pos, d = mut[0], int(mut[1:-1])-1, mut[-1] node.sequences['nuc'][pos] = d if 'aa_muts' in all_muts.get(node.name, {}): for gene in all_muts[node.name]['aa_muts']: for mut in all_muts[node.name]['aa_muts'][gene]: a, pos, d = mut[0], int(mut[1:-1])-1, mut[-1] if gene not in node.sequences: node.sequences[gene]={} node.sequences[gene][pos] = d # second pass to assign basal nodes within each clade to the clade_labels dict # if multiple nodes match, assign annotation to largest # otherwise occasional unwanted cousin nodes get assigned the annotation for clade_name, clade_alleles in clade_designations.items(): node_counts = [] for node in tree.find_clades(order = 'preorder'): if is_node_in_clade(clade_alleles, node, ref): node_counts.append(node) sorted_nodes = sorted(node_counts, key=lambda x: x.leaf_count, reverse=True) if len(sorted_nodes) > 0: target_node = sorted_nodes[0] clade_membership[target_node.name] = clade_name clade_labels[target_node.name] = clade_name # third pass to propagate clade_membership to descendant nodes # (until we encounter a node with its own clade_membership) for node in tree.find_clades(order = 'preorder'): for child in node: if child.name not in clade_labels: clade_membership[child.name] = clade_membership[node.name] return (clade_membership, clade_labels) def warn_if_clades_not_found(membership, clade_designations): clades = set(clade_designations.keys()) found = set([clade for clade in membership.values() if clade!=UNASSIGNED]) if not(len(found)): print(f"WARNING in augur.clades: no clades found in tree!") return for clade in clades-found: # warn loudly - one line per unfound clade print(f"WARNING in augur.clades: clade '{clade}' not found in tree!") def get_reference_sequence_from_root_node(all_muts, root_name): """ Extracts the (nuc) sequence from the root node, if set, as well as the (aa) sequences. Returns a dictionary of {geneName: rootSequence} where rootSequence is a list and geneName may be 'nuc'. """ ref = {} # the presence of a single mutation will imply that the corresponding reference # sequence should be present, and we will warn if it is not nt_present = False genes_present = set([]) missing = [] for d in all_muts.values(): if "muts" in d: nt_present = True genes_present.update(d.get('aa_muts', {}).keys()) if nt_present: try: ref['nuc'] = list(all_muts.get(root_name, {})["sequence"]) except KeyError: missing.append("nuc") for gene in genes_present: try: ref[gene] = list(all_muts.get(root_name, {}).get("aa_sequences", {})[gene]) except KeyError: missing.append(gene) if missing: print(f"WARNING in augur.clades: sequences at the root node have not been specified for {{{', '.join(missing)}}}, \ even though mutations were observed. Clades which are annotated using bases/codons present at the root \ of the tree may not be correctly inferred.") return ref def parse_nodes(tree_file, node_data_files): tree = Phylo.read(tree_file, 'newick') # don't supply tree to read_node_data as we don't want to require that every node is present in the node_data JSONs node_data = read_node_data(node_data_files) # node_data files can be parsed without 'nodes' (if they have 'branches') if "nodes" not in node_data or len(node_data['nodes'].keys())==0: raise AugurError(f"No nodes found in the supplied node data files. Please check {', '.join(node_data_files)}") json_nodes = set(node_data["nodes"].keys()) tree_nodes = set([clade.name for clade in tree.find_clades()]) if not json_nodes.issubset(tree_nodes): raise AugurError(f"The following nodes in the node_data files ({', '.join(node_data_files)}) are not found in the tree ({tree_file}): {', '.join(json_nodes - tree_nodes)}") ensure_no_multiple_mutations(node_data['nodes']) return (tree, node_data['nodes']) def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("clades", help=__doc__) parser.add_argument('--tree', required=True, help="prebuilt Newick -- no tree will be built if provided") parser.add_argument('--mutations', required=True, metavar="NODE_DATA_JSON", nargs='+', help='JSON(s) containing ancestral and tip nucleotide and/or amino-acid mutations ') parser.add_argument('--reference', nargs='+', help=SUPPRESS) parser.add_argument('--clades', required=True, metavar="TSV", type=str, help='TSV file containing clade definitions by amino-acid') parser.add_argument('--output-node-data', type=str, metavar="NODE_DATA_JSON", help='name of JSON file to save clade assignments to') parser.add_argument('--membership-name', type=str, default="clade_membership", help='Key to store clade membership under; use "None" to not export this') parser.add_argument('--label-name', type=str, default="clade", help='Key to store clade labels under; use "None" to not export this') return parser def run(args): (tree, all_muts) = parse_nodes(args.tree, args.mutations) if args.reference: # PLACE HOLDER FOR vcf WORKFLOW. # Works without a reference for now but can be added if clade defs contain positions # that are monomorphic across reference and sequence sample. print(f"WARNING in augur.clades: You have provided a --reference file(s) ({args.reference}) however this is functionality is not yet supported.") ref = None else: # extract reference sequences from the root node entry in the mutation json # if this doesn't exist, it will complain but not error. ref = get_reference_sequence_from_root_node(all_muts, tree.root.name) clade_designations = read_in_clade_definitions(args.clades) membership, labels = assign_clades(clade_designations, all_muts, tree, ref) warn_if_clades_not_found(membership, clade_designations) membership_key= args.membership_name if args.membership_name.upper() != "NONE" else None label_key= args.label_name if args.label_name.upper() != "NONE" else None node_data_json = {} if membership_key: node_data_json['nodes'] = {node: {membership_key: clade} for node,clade in membership.items()} print(f"Clade membership stored on nodes → → {membership_key}", file=sys.stdout) if label_key: node_data_json['branches'] = {node: {'labels': {label_key: label}} for node,label in labels.items()} print(f"Clade labels stored on branches → → labels → {label_key}", file=sys.stdout) out_name = get_json_name(args) write_json(node_data_json, out_name) print(f"Clades written to {out_name}", file=sys.stdout) augur-24.2.2/augur/curate/000077500000000000000000000000001456376326500153535ustar00rootroot00000000000000augur-24.2.2/augur/curate/__init__.py000066400000000000000000000207651456376326500174760ustar00rootroot00000000000000""" A suite of commands to help with data curation. """ import argparse import sys from collections import deque from textwrap import dedent from augur.argparse_ import add_command_subparsers from augur.errors import AugurError from augur.io.json import dump_ndjson, load_ndjson from augur.io.metadata import DEFAULT_DELIMITERS, InvalidDelimiter, read_table_to_dict, read_metadata_with_sequences, write_records_to_tsv from augur.io.sequences import write_records_to_fasta from augur.types import DataErrorMethod from . import format_dates, normalize_strings, passthru, titlecase SUBCOMMAND_ATTRIBUTE = '_curate_subcommand' SUBCOMMANDS = [ passthru, normalize_strings, format_dates, titlecase, ] def create_shared_parser(): """ Creates an argparse.ArgumentParser that is intended to be used as a parent parser¹ for all `augur curate` subcommands. This should include all options that are intended to be shared across the subcommands. Note that any options strings used here cannot be used in individual subcommand subparsers unless the subparser specifically sets `conflict_handler='resolve'`², then the subparser option will override the option defined here. Based on https://stackoverflow.com/questions/23296695/permit-argparse-global-flags-after-subcommand/23296874#23296874 ¹ https://docs.python.org/3/library/argparse.html#parents ² https://docs.python.org/3/library/argparse.html#conflict-handler """ shared_parser = argparse.ArgumentParser(add_help=False) shared_inputs = shared_parser.add_argument_group( title="INPUTS", description=""" Input options shared by all `augur curate` commands. If no input options are provided, commands will try to read NDJSON records from stdin. """) shared_inputs.add_argument("--metadata", help="Input metadata file. Accepts '-' to read metadata from stdin.") shared_inputs.add_argument("--id-column", help="Name of the metadata column that contains the record identifier for reporting duplicate records. " "Uses the first column of the metadata file if not provided. " "Ignored if also providing a FASTA file input.") shared_inputs.add_argument("--metadata-delimiters", default=DEFAULT_DELIMITERS, nargs="+", help="Delimiters to accept when reading a metadata file. Only one delimiter will be inferred.") shared_inputs.add_argument("--fasta", help="Plain or gzipped FASTA file. Headers can only contain the sequence id used to match a metadata record. " + "Note that an index file will be generated for the FASTA file as .fasta.fxi") shared_inputs.add_argument("--seq-id-column", help="Name of metadata column that contains the sequence id to match sequences in the FASTA file.") shared_inputs.add_argument("--seq-field", help="The name to use for the sequence field when joining sequences from a FASTA file.") shared_inputs.add_argument("--unmatched-reporting", type=DataErrorMethod.argtype, choices=list(DataErrorMethod), default=DataErrorMethod.ERROR_FIRST, help="How unmatched records from combined metadata/FASTA input should be reported.") shared_inputs.add_argument("--duplicate-reporting", type=DataErrorMethod.argtype, choices=list(DataErrorMethod), default=DataErrorMethod.ERROR_FIRST, help="How should duplicate records be reported.") shared_outputs = shared_parser.add_argument_group( title="OUTPUTS", description=""" Output options shared by all `augur curate` commands. If no output options are provided, commands will output NDJSON records to stdout. """) shared_outputs.add_argument("--output-metadata", help="Output metadata TSV file. Accepts '-' to output TSV to stdout.") shared_outputs.add_argument("--output-fasta", help="Output FASTA file.") shared_outputs.add_argument("--output-id-field", help="The record field to use as the sequence identifier in the FASTA output.") shared_outputs.add_argument("--output-seq-field", help="The record field that contains the sequence for the FASTA output. " "This field will be deleted from the metadata output.") return shared_parser def register_parser(parent_subparsers): shared_parser = create_shared_parser() parser = parent_subparsers.add_parser("curate", help=__doc__) # Add print_help so we can run it when no subcommands are called parser.set_defaults(print_help = parser.print_help) # Add subparsers for subcommands subparsers = parser.add_subparsers(dest="subcommand", required=False) # Add the shared_parser to make it available for subcommands # to include in their own parser subparsers.shared_parser = shared_parser # Using a subcommand attribute so subcommands are not directly # run by top level Augur. Process I/O in `curate`` so individual # subcommands do not have to worry about it. add_command_subparsers(subparsers, SUBCOMMANDS, SUBCOMMAND_ATTRIBUTE) return parser def run(args): # Print help if no subcommands are used if not getattr(args, SUBCOMMAND_ATTRIBUTE, None): return args.print_help() # Check provided args are valid and required combination of args are provided if not args.fasta and (args.seq_id_column or args.seq_field): raise AugurError("The --seq-id-column and --seq-field options should only be used when providing a FASTA file.") if args.fasta and (not args.seq_id_column or not args.seq_field): raise AugurError("The --seq-id-column and --seq-field options are required for a FASTA file input.") if not args.output_fasta and (args.output_id_field or args.output_seq_field): raise AugurError("The --output-id-field and --output-seq-field options should only be used when requesting a FASTA output.") if args.output_fasta and (not args.output_id_field or not args.output_seq_field): raise AugurError("The --output-id-field and --output-seq-field options are required for a FASTA output.") # Read inputs # Special case single hyphen as stdin if args.metadata == '-': args.metadata = sys.stdin if args.metadata and args.fasta: try: records = read_metadata_with_sequences( args.metadata, args.metadata_delimiters, args.fasta, args.seq_id_column, args.seq_field, args.unmatched_reporting, args.duplicate_reporting) except InvalidDelimiter: raise AugurError( f"Could not determine the delimiter of {args.metadata!r}. " f"Valid delimiters are: {args.metadata_delimiters!r}. " "This can be changed with --metadata-delimiters." ) elif args.metadata: try: records = read_table_to_dict(args.metadata, args.metadata_delimiters, args.duplicate_reporting, args.id_column) except InvalidDelimiter: raise AugurError( f"Could not determine the delimiter of {args.metadata!r}. " f"Valid delimiters are: {args.metadata_delimiters!r}. " "This can be changed with --metadata-delimiters." ) elif not sys.stdin.isatty(): records = load_ndjson(sys.stdin) else: raise AugurError(dedent("""\ No valid inputs were provided. NDJSON records can be streamed from stdin or input files can be provided via the command line options `--metadata` and `--fasta`. See the command's help message for more details.""")) # Run subcommand to get modified records modified_records = getattr(args, SUBCOMMAND_ATTRIBUTE).run(args, records) # Output modified records # First output FASTA, since the write fasta function yields the records again # and removes the sequences from the records if args.output_fasta: modified_records = write_records_to_fasta( modified_records, args.output_fasta, args.output_id_field, args.output_seq_field) if args.output_metadata: write_records_to_tsv(modified_records, args.output_metadata) if not (args.output_fasta or args.output_metadata): dump_ndjson(modified_records) else: # Exhaust generator to ensure we run through all records # when only a FASTA output is requested but not a metadata output deque(modified_records, maxlen=0) augur-24.2.2/augur/curate/format_dates.py000066400000000000000000000175711456376326500204100ustar00rootroot00000000000000""" Format date fields to ISO 8601 dates (YYYY-MM-DD), where incomplete dates are masked with 'XX' (e.g. 2023 -> 2023-XX-XX). """ import re from datetime import datetime from augur.argparse_ import SKIP_AUTO_DEFAULT_IN_HELP from augur.errors import AugurError from augur.io.print import print_err from augur.types import DataErrorMethod from .format_dates_directives import YEAR_DIRECTIVES, YEAR_MONTH_DIRECTIVES, YEAR_MONTH_DAY_DIRECTIVES def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("format-dates", parents=[parent_subparsers.shared_parser], help=__doc__) required = parser.add_argument_group(title="REQUIRED") required.add_argument("--date-fields", nargs="+", help="List of date field names in the record that need to be standardized.") required.add_argument("--expected-date-formats", nargs="+", help="Expected date formats that are currently in the provided date fields, " + "defined by standard format codes as listed at " + "https://docs.python.org/3/library/datetime.html#strftime-and-strptime-format-codes. " + "If a date string matches multiple formats, it will be parsed as the first matched format in the provided order.") optional = parser.add_argument_group(title="OPTIONAL") optional.add_argument("--failure-reporting", type=DataErrorMethod.argtype, choices=list(DataErrorMethod), default=DataErrorMethod.ERROR_FIRST, help="How should failed date formatting be reported.") optional.add_argument("--no-mask-failure", dest="mask_failure", action="store_false", help="Do not mask dates with 'XXXX-XX-XX' and return original date string if date formatting failed. " + f"(default: False{SKIP_AUTO_DEFAULT_IN_HELP})") return parser def directive_is_included(potential_directives, date_format): """ Checks if any of the directives in *potential_directives* is included in *date_format* string. If an element within *potential_directives* is a tuple, then all directives within the tuple must be included in *date_format*. Parameters ---------- potential_directives: set[tuple[str, ...]] Set of potential directives to check date_format: str Date format string to check for directives Returns ------- bool: Whether the provided *date_format* includes any of the *potential_directives* >>> potential_directives = {('%y', '%b', '%d'), ('%y', '%B', '%d'), ('%y', '%m', '%d'),} >>> directive_is_included(potential_directives, '%G-%V-%A') False >>> directive_is_included(potential_directives, '%y-%m') False >>> directive_is_included(potential_directives, '%%y-%m-%d') False >>> directive_is_included(potential_directives, '%y-%m-%d') True >>> directive_is_included(potential_directives, '%y-%m-%dT%H:%M:%SZ') True """ return any( all( # Exclude escaped directives (e.g. '%%Y' means literal '%Y' not a four digit year) bool(re.search(f"(?>> expected_formats = ['%Y', '%Y-%m', '%Y-%m-%d', '%Y-%m-%dT%H:%M:%SZ', '%m-%d'] >>> format_date("01-01", expected_formats) 'XXXX-XX-XX' >>> format_date("2020", expected_formats) '2020-XX-XX' >>> format_date("2020-01", expected_formats) '2020-01-XX' >>> format_date("2020-1-15", expected_formats) '2020-01-15' >>> format_date("2020-1-1", expected_formats) '2020-01-01' >>> format_date("2020-01-15", expected_formats) '2020-01-15' >>> format_date("2020-01-15T00:00:00Z", expected_formats) '2020-01-15' """ for date_format in expected_formats: try: parsed_date = datetime.strptime(date_string, date_format) except ValueError: continue # Default to date masked as 'XXXX-XX-XX' so we don't return incorrect dates year_string = 'XXXX' month_string = day_string = 'XX' parsed_year_string = str(parsed_date.year) parsed_month_string = str(parsed_date.month).zfill(2) parsed_day_string = str(parsed_date.day).zfill(2) # If directives for all year,month,day fields are included in date_format, # then use all of the parsed field strings if directive_is_included(YEAR_MONTH_DAY_DIRECTIVES, date_format): year_string = parsed_year_string month_string = parsed_month_string day_string = parsed_day_string # If directives only include year and month are included in date_format, # then only use the parsed year and month field strings elif directive_is_included(YEAR_MONTH_DIRECTIVES, date_format): year_string = parsed_year_string month_string = parsed_month_string # If directives only include year in date_format, the only use the # parsed year field string elif directive_is_included(YEAR_DIRECTIVES, date_format): year_string = parsed_year_string return f"{year_string}-{month_string}-{day_string}" return None def run(args, records): failures = [] failure_reporting = args.failure_reporting for index, record in enumerate(records): record = record.copy() record_id = index for field in args.date_fields: date_string = record.get(field) if not date_string: continue formatted_date_string = format_date(date_string, args.expected_date_formats) if formatted_date_string is None: # Mask failed date formatting before processing error methods # to ensure failures are masked even when failures are "silent" if args.mask_failure: record[field] = "XXXX-XX-XX" if failure_reporting is DataErrorMethod.SILENT: continue failure_message = f"Unable to format date string {date_string!r} in field {field!r} of record {record_id!r}." if failure_reporting is DataErrorMethod.ERROR_FIRST: raise AugurError(failure_message) if failure_reporting is DataErrorMethod.WARN: print_err(f"WARNING: {failure_message}") # Keep track of failures for final summary failures.append((record_id, field, date_string)) else: record[field] = formatted_date_string yield record if failure_reporting is not DataErrorMethod.SILENT and failures: failure_message = ( "Unable to format dates for the following (record, field, date string):\n" + \ '\n'.join(map(repr, failures)) ) if failure_reporting is DataErrorMethod.ERROR_ALL: raise AugurError(failure_message) elif failure_reporting is DataErrorMethod.WARN: print_err(f"WARNING: {failure_message}") else: raise ValueError(f"Encountered unhandled failure reporting method: {failure_reporting!r}") augur-24.2.2/augur/curate/format_dates_directives.py000066400000000000000000000020421456376326500226140ustar00rootroot00000000000000from itertools import product year = {'%y', '%Y'} month = {'%b', '%B', '%m'} day = {'%d'} month_and_day = {'%j'} week = {'%U', '%W'} day_of_week = {'%A', '%a', '%w', '%u'} # Set of directives that can be converted to complete date with year, month, and day YEAR_MONTH_DAY_DIRECTIVES = ( # Locale's full date representation {('%c',),('%x',)} | # Dates with ISO 8601 week dates for year ('%G' is NOT interchangeable with '%Y'), ISO 8601 week ('%V'), and weekdays {('%G', '%V', '%A'),('%G', '%V', '%a'),('%G', '%V', '%w'),('%G', '%V', '%u')} | # Dates with year, week, and weekday set(product(year, week, day_of_week)) | # Dates with year and day of the year set(product(year, month_and_day)) | # Dates with year, month, and day set(product(year, month, day)) ) # Set of directives that can be converted to incomplete dates, missing the day YEAR_MONTH_DIRECTIVES = set(product(year, month)) # Set of directives that can be converted to incomplete dates, missing the month and day YEAR_DIRECTIVES = set(product(year)) augur-24.2.2/augur/curate/normalize_strings.py000066400000000000000000000027751456376326500215110ustar00rootroot00000000000000""" Normalize strings to a Unicode normalization form and strip leading and trailing whitespaces. Strings need to be normalized for predictable string comparisons, especially in cases where strings contain diacritics (see https://unicode.org/faq/normalization.html). """ import unicodedata from augur.utils import first_line def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("normalize-strings", parents=[parent_subparsers.shared_parser], help=first_line(__doc__)) optional = parser.add_argument_group(title="OPTIONAL") optional.add_argument("--form", default="NFC", choices=["NFC", "NFKC", "NFD", "NFKD"], help="Unicode normalization form to use for normalization.") return parser def normalize_strings(record, form='NFC'): """ Normalizes string values in *record* to a Unicode normalization *form* and removes leading and trailing whitespaces from string. Uses `NFC` normalization form by default. Parameters ---------- records: dict An input record to be normalized form: str, optional An optional Unicode normalization form Yields ------ record: dict The modified record that is a shallow copy of the original record """ return { key: (unicodedata.normalize(form, value).strip() if isinstance(value, str) else value) for key, value in record.items() } def run(args, records): for record in records: yield normalize_strings(record, args.form) augur-24.2.2/augur/curate/passthru.py000066400000000000000000000005441456376326500176010ustar00rootroot00000000000000""" Pass through records without doing any data transformations. Useful for testing, troubleshooting, or just converting file formats. """ def register_parser(parent_subparsers): return parent_subparsers.add_parser("passthru", parents=[parent_subparsers.shared_parser], help=__doc__) def run(args, records): yield from records augur-24.2.2/augur/curate/titlecase.py000077500000000000000000000107501456376326500177100ustar00rootroot00000000000000""" Applies titlecase to string fields in a metadata record """ import re from typing import Optional, Set, Union from augur.errors import AugurError from augur.io.print import print_err from augur.types import DataErrorMethod def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("titlecase", parents = [parent_subparsers.shared_parser], help = __doc__) required = parser.add_argument_group(title="REQUIRED") required.add_argument("--titlecase-fields", nargs="*", help="List of fields to convert to titlecase.", required=True) optional = parser.add_argument_group(title="OPTIONAL") optional.add_argument("--articles", nargs="*", help="List of articles that should not be converted to titlecase.") optional.add_argument("--abbreviations", nargs="*", help="List of abbreviations that should not be converted to titlecase, keeps uppercase.") optional.add_argument("--failure-reporting", type=DataErrorMethod.argtype, choices=[ method for method in DataErrorMethod ], default=DataErrorMethod.ERROR_FIRST, help="How should failed titlecase formatting be reported.") return parser def titlecase(text: Union[str, None], articles: Set[str] = set(), abbreviations: Set[str] = set()) -> Optional[str]: """ Originally from nextstrain/ncov-ingest Returns a title cased location name from the given location name *tokens*. Ensures that no tokens contained in the *whitelist_tokens* are converted to title case. >>> articles = {'a', 'and', 'of', 'the', 'le'} >>> abbreviations = {'USA', 'DC'} >>> titlecase("the night OF THE LIVING DEAD", articles) 'The Night of the Living Dead' >>> titlecase("BRAINE-LE-COMTE, FRANCE", articles) 'Braine-le-Comte, France' >>> titlecase("auvergne-RHÔNE-alpes", articles) 'Auvergne-Rhône-Alpes' >>> titlecase("washington DC, usa", articles, abbreviations) 'Washington DC, USA' """ if not isinstance(text, str): return None words = enumerate(re.split(r'\b', text)) def changecase(index, word): casefold = word.casefold() upper = word.upper() if upper in abbreviations: return upper elif casefold in articles and index != 1: return word.lower() else: return word.title() return ''.join(changecase(i, w) for i, w in words) def run(args, records): failures = [] failure_reporting = args.failure_reporting articles = set() if args.articles: articles = set(args.articles) abbreviations = set() if args.abbreviations: abbreviations = set(args.abbreviations) for index, record in enumerate(records): record = record.copy() record_id = index for field in args.titlecase_fields: # Ignore non-existent fields but could change this to warnings if desired if field not in record: continue elif record[field] is None: continue titlecased_string = titlecase(record[field], articles, abbreviations) failure_message = f"Failed to titlecase {field!r}:{record.get(field)!r} in record {record_id!r} because the value is a {type(record.get(field)).__name__!r} and is not a string." if titlecased_string is None: if failure_reporting is DataErrorMethod.ERROR_FIRST: raise AugurError(failure_message) if failure_reporting is DataErrorMethod.ERROR_ALL: print_err(f"ERROR: {failure_message}") if failure_reporting is DataErrorMethod.WARN: print_err(f"WARNING: {failure_message}") # Keep track of failures for final summary failures.append((record_id, field, record.get(field))) else: record[field] = titlecased_string yield record if failure_reporting is not DataErrorMethod.SILENT and failures: failure_message = ( "Unable to change to titlecase for the following (record, field, field value):\n" + \ '\n'.join(map(repr, failures)) ) if failure_reporting is DataErrorMethod.ERROR_ALL: raise AugurError(failure_message) elif failure_reporting is DataErrorMethod.WARN: print_err(f"WARNING: {failure_message}") else: raise ValueError(f"Encountered unhandled failure reporting method: {failure_reporting!r}")augur-24.2.2/augur/data/000077500000000000000000000000001456376326500150015ustar00rootroot00000000000000augur-24.2.2/augur/data/__init__.py000066400000000000000000000023661456376326500171210ustar00rootroot00000000000000""" Resource files. """ # Originally copied from nextstrain/cli/resources/__init__.py in the Nextstrain # CLI project¹. # # ¹ # We gate usage of the stdlib implementation on 3.11 because that's the first # version with a full adapter for making the new files() / Traversable API # backwards compatible with importers only providing the original path() / # ResourceReader API. The PyPI backport, on the other hand, contains the full # adapter since 5.3.0, which we declare as our minimum version in setup.py, so # we use that even on 3.9 and 3.10. # # We're using the new API at all because the original one is being deprecated # and we want to avoid warnings both from the stdlib implementation on 3.11 and # from the PyPI backport implementation on older Python versions. # -trs, 13 Sept 2022 import sys if sys.version_info >= (3, 11): from importlib.resources import files as _files, as_file as _as_file else: from importlib_resources import files as _files, as_file as _as_file from pathlib import Path from typing import ContextManager def as_file(path: str) -> ContextManager[Path]: return _as_file(_files(__name__) / path) augur-24.2.2/augur/data/colors.tsv000066400000000000000000000006441456376326500170440ustar00rootroot00000000000000region china #4042C7 region southeast_asia #4274CE region southeast asia #4274CE region south_asia #5199B7 region south asia #5199B7 region japan_korea #69B091 region japan korea #69B091 region oceania #88BB6C region west_asia #ADBD51 region west asia #ADBD51 region africa #CEB541 region europe #E39B39 region south_america #E56C2F region south america #E56C2F region north_america #DC2F24 region north america #DC2F24 augur-24.2.2/augur/data/lat_longs.tsv000066400000000000000000000337421456376326500175320ustar00rootroot00000000000000region africa 4.070194 21.824559 region china 35.000074 104.999927 region asia 35.000074 104.999927 region europe 49.646237 10.799454 region japan_korea 35.845119 136.736386 region japan korea 35.845119 136.736386 region north_america 28.2367447 -97.738017 region north america 28.2367447 -97.738017 region oceania -25.0562891 152.008576 region south_america -13.083583 -58.470721 region south america -13.083583 -58.470721 region south_asia 24.485438 76.513158 region south asia 24.485438 76.513158 region southeast_asia 3.020567 112.390683 region southeast asia 3.020567 112.390683 region west_asia 34.000094 48.732280 region west asia 34.000094 48.732280 country afghanistan 33.0 66.0 country albania 41.0 20.0 country algeria 28.0000272 2.9999825 country anguilla 18.21704 -63.05783 country american_samoa -14.27806 -170.7025 country american samoa -14.27806 -170.7025 country angola -11.8775767 17.5691241 country argentina -34.0 -64.0 country armenia 40.18111 44.51361 country aruba 12.512306 -69.975188 country australia -24.7761085 134.755 country austria 47.2000338 13.199959 country azerbaijan 40.37767 49.89201 country bahamas 25.04082 -77.37122 country bahrain 26.22787 50.58565 country barbados 13.16667 -59.53333 country belarus 53.0 28.0 country bali -8.3304976 115.0906401 country bangladesh 24.4768783 90.2932426 country belgium 50.6407351 4.66696 country belize 17.49952 -88.19756 country benin 9.668764 2.284078 country bermuda 32.2949 -64.78303 country bhutan 27.5142 90.4336 country bolivia -17.0 -65.0 country bosnia_herzegovina 43.84864 18.35644 country bosnia herzegovina 43.84864 18.35644 country botswana -22.199114 24.017975 country brazil -10.3333332 -53.1999999 country british_virgin_islands 18.437033 -64.616732 country british virgin islands 18.437033 -64.616732 country brunei 4.5 114.66667 country bulgaria 42.6073975 25.4856617 country burkina_faso 12.5 -1.66667 country burkina faso 12.5 -1.66667 country cambodia 13.0 105.0 country cameroon 6.0 12.5 country canada 61.0666922 -107.991707 country cape_verde 14.998654 -23.530702 country cape verde 14.998654 -23.530702 country cayman_islands 19.323979 -81.138315 country cayman islands 19.323979 -81.138315 country central_african_republic 7.0 21.0 country central african republic 7.0 21.0 country chile -31.7613364 -71.3187696 country china 35.000074 104.999927 country colombia 2.893108 -73.7845142 country cook_islands -21.24842 -159.78516 country cook islands -21.24842 -159.78516 country comoros -12.2045175 44.2832964 country congo -0.7264326 15.6419155 country costa_rica 10.0 -84.0 country costa rica 10.0 -84.0 country cote_d_ivoire 7.9897371 -5.5679457 country cote d ivoire 7.9897371 -5.5679457 country croatia 45.16667 15.5 country cuba 22.0 -79.5 country cyprus 35.0 33.0 country czech_republic 49.8175 15.4730 country czech republic 49.8175 15.4730 country democratic_republic_of_the_congo -3.394559 23.306004 country democratic republic of the congo -3.394559 23.306004 country denmark 56.0 10.0 country djibouti 11.58901 43.14503 country dominica 15.5 -61.33333 country dominican_republic 18.50012 -69.98857 country dominican republic 18.50012 -69.98857 country east_timor -8.5151978 125.8375756 country east timor -8.5151978 125.8375756 country ecuador -1.3397667 -79.3666964 country egypt 26.2540493 29.2675469 country el_salvador 13.68935 -89.18718 country el salvador 13.68935 -89.18718 country eritrea 15.9500319 37.9999668 country estonia 59.0 26.0 country ethiopia 9.0 39.5 country fiji -18.1239695 179.0122737 country finland 63.2467777 25.9209164 country france 46.603354 1.8883335 country french_guiana 4.93333 -52.33333 country french guiana 4.93333 -52.33333 country french_polynesia -17.6797 -149.4068 country french polynesia -17.6797 -149.4068 country gabon -0.8999694 11.6899699 country gambia 13.5 -15.5 country georgia_country 41.775743 44.336896 country georgia country 41.775743 44.336896 country germany 51.0834196 10.4234469 country ghana 8.0300284 -1.080027 country greece 39.0 22.0 country grenada 12.11667 -61.66667 country guadeloupe 16.2650 -61.5510 country guam 13.51777 144.8391 country guatemala 15.6356088 -89.8988086 country guinea 10.7226226 -10.7083586 country guinea_bissau 12.042637 -14.949526 country guinea bissau 12.042637 -14.949526 country guyana 5.0 -59.0 country haiti 19.1399952 -72.3570971 country honduras 15.0610686 -84.5978533 country hong_kong 22.3964 114.1095 country hong kong 22.3964 114.1095 country hungary 47.0 20.0 country iceland 64.9841821 -18.1059012 country india 22.3511148 78.6677428 country indonesia -5.0 120.0 country iran 32.0 53.0 country iraq 33.0 44.0 country ireland 52.865196 -7.9794598 country israel 31.5 34.75 country italy 42.6384261 12.674297 country jamaica 18.16667 -77.25 country japan 35.68536 139.75309 country jordan 31.1667049 36.941628 country kazakhstan 47.2286086 65.2093197 country kenya 1.0 38.0 country kosovo 42.563516 20.889978 country kuwait 29.3117 47.4818 country kyrgyzstan 41.5 75.0 country laos 20.0171109 103.378253 country latvia 57.0 25.0 country lebanon 33.88894 35.49442 country liberia 5.7499721 -9.3658523 country lithuania 55.41667 24.0 country luxembourg 49.61167 6.13 country macedonia 41.66667 21.75 country madagascar -20.0 47.0 country malawi -13.550995 34.124594 country malaysia 2.3923759 112.8471939 country maldives 4.7064352 73.3287853 country mali 18.0 -2.0 country malta 35.891045 14.441412 country marshall_islands 7.1315 171.1845 country marshall islands 7.1315 171.1845 country martinique 14.6415 -61.0242 country mauritania 20.25 -10.5 country mauritius -20.3 57.58333 country mayotte -12.821908 45.143906 country mexico 19.4325301 -99.1332101 country micronesia 6.924 158.162 country moldova 47.412810 28.565826 country mongolia 46.8250388 103.8499736 country montenegro 43.0285558 19.291739 country morocco 31.1728192 -7.3366042 country mozambique -18.25 35.0 country myanmar 21.0 96.0 country nauru -0.517 166.933 country nepal 28.0 84.0 country netherlands 52.3702 4.8952 country new_caledonia -20.9043 165.6180 country new caledonia -20.9043 165.6180 country new_zealand -41.500083 172.8344077 country new zealand -41.500083 172.8344077 country nicaragua 13.0 -85.0 country niger 18.0 9.0 country nigeria 10.0 8.0 country northern_mariana_islands 15.21233 145.7545 country northern mariana islands 15.21233 145.7545 country norway 64.574131 11.5270102892 country oman 21.0000287 57.0036901 country pakistan 30.0 70.0 country palau 7.33978 134.47326 country palestine 31.5 34.46667 country panama 8.3096067 -81.3066245 country papua_new_guinea -6.0 147.0 country papua new guinea -6.0 147.0 country paraguay -23.33333 -58.0 country peru -10.0 -75.25 country philippines 12.8797 121.7740 country poland 52.0977181 19.0258159 country portugal 39.6945 -8.13057 country puerto_rico 18.2459121 -66.4164147 country puerto rico 18.2459121 -66.4164147 country qatar 25.27932 51.52245 country reunion -21.1151 55.5364 country romania 46.0 25.0 country russia 64.6863136 97.7453061 country rwanda -2.0 30.0 country saint_barthelemy 17.9049171 -62.847207 country saint barthelemy 17.9049171 -62.847207 country saint_kitts 17.29484 -62.7261 country saint kitts 17.29484 -62.7261 country saint_lucia 13.88333 -60.96667 country saint lucia 13.88333 -60.96667 country saint_vincent_and_the_grenadines 12.9843 -61.2872 country saint vincent and the grenadines 12.9843 -61.2872 country samoa -13.598724 -172.454467 country saudi_arabia 25.0 45.0 country saudi arabia 25.0 45.0 country senegal 14.5 -14.25 country serbia 44.1534121 20.55144 country seychelles -4.58333 55.66667 country sierra_leone 8.5 -11.5 country sierra leone 8.5 -11.5 country singapore 1.2904527 103.852038 country slovakia 48.66667 19.5 country slovenia 45.8133113 14.4808369 country solomon_islands -8.0 159.0 country solomon islands -8.0 159.0 country somalia 8.3676771 49.083416 country south_africa -28.8166235 24.991639 country south africa -28.8166235 24.991639 country south_korea 35.3985008 127.937111 country south korea 35.3985008 127.937111 country spain 40.0028028 -4.0031039 country sri_lanka 7.75 80.75 country sri lanka 7.75 80.75 country sudan 16.0 30.0 country suriname 4.1413025 -56.0771186 country sweden 59.6749712 14.5208584 country switzerland 47.00016 8.01427 country syria 35.217054 38.372227 country taiwan 23.6978 120.9605 country tajikistan 39.0 71.0 country tanzania -6.0 35.0 country thailand 14.8971921 100.83273 country tibet 31.129337 88.671049 country togo 8.66667 1.08333 country tonga -19.9160818 -175.2026423 country trinidad_and_tobago 10.8677845 -60.9821066 country trinidad and tobago 10.8677845 -60.9821066 country tunisia 36.81897 10.16579 country turkey 39.0 35.0 country turkmenistan 39.3763807 59.3924609 country turks_and_caicos 21.73333 -71.58333 country turks and caicos 21.73333 -71.58333 country tuvalu -8.521152 179.197605 country uruguay -33.0 -56.0 country uganda 1.5333554 32.2166578 country ukraine 49.4871968 31.2718321 country united_arab_emirates 24.0002488 53.9994829 country united arab emirates 24.0002488 53.9994829 country united_kingdom 54.542713 -2.384858 country united kingdom 54.542713 -2.384858 country usa 39.7837304 -100.4458824 country usvi 18.3378801 -64.8982827 country vanuatu -17.734818 168.3220 country venezuela 8.0 -66.0 country vietnam 16.16667 107.83333 country wallis_and_futuna -13.28163 -176.17453 country wallis and futuna -13.28163 -176.17453 country yemen 16.3471243 47.8915271 country zambia -14.33333 28.5 country zimbabwe -19.307486 29.7968377 division alabama 33.2588817 -86.8295336 division alaska 64.4459613 -149.6809089 division arizona 34.395342 -111.7632754 division arkansas 35.2048883 -92.4479107 division beyla 8.6898481 -8.6483449 division bo 7.9620654 -11.7366498 division boke 10.952242 -14.2760634 division bombali 9.2388372 -12.1148023 division bomi 6.7177856 -10.7881765 division bong 6.9622195 -9.7134458 division bonthe 7.5292766 -12.5131865 division british_columbia 49.24966 -123.11934 division british columbia 49.24966 -123.11934 division california 36.7014631 -118.7559973 division colorado 38.7251776 -105.6077166 division conakry 9.5171253 -13.6999234 division connecticut 41.6500201 -72.7342162 division coyah 9.7090404 -13.3889559 division dalaba 10.6913277 -12.2512594 division delaware 38.6920451 -75.4013314 division dubreka 9.7889586 -13.5171217 division faranah 10.3143203 -10.8900969 division florida 27.7567667 -81.4639834 division forecariah 9.4300088 -13.0833858 division fria 10.363036 -13.5811849 division gbarpolu 7.2681564 -10.381477 division georgia 32.3293809 -83.1137365 division grand_bassa 6.1640621 -9.8956689 division grand bassa 6.1640621 -9.8956689 division grand_cape_mount 7.0496206 -11.1298429 division grand cape mount 7.0496206 -11.1298429 division grand_kru 4.84932 -8.3308844 division grand kru 4.84932 -8.3308844 division gueckedou 8.5616487 -10.1328211 division hawaii 21.2160437 -157.9752029 division idaho 43.6447642 -114.015407 division illinois 40.0796319 -89.4339808 division indiana 40.3270127 -86.1746932 division iowa 41.9216734 -93.3122704 division kailahun 8.2769105 -10.5737535 division kambia 9.1246846 -12.9189133 division kankan 10.3833686 -9.3047575 division kansas 38.27312 -98.5821871 division kenema 7.8859356 -11.1863898 division kentucky 37.5726028 -85.155141 division kerouane 11.4231137 -9.5938615 division kindia 10.0492476 -12.8577996 division kissidougou 9.2101274 -10.1215916 division koinadugu 9.3727454 -11.3253108 division kono 8.6868883 -10.9194453 division kouroussa 10.6519303 -9.8811521 division lofa 7.8824046 -9.9760296 division lola 8.0166961 -8.30784246327 division louisiana 30.8703881 -92.0071259 division macenta 8.5458459 -9.4679199 division maine 45.709097 -68.85902 division manitoba 49.8844 -97.14704 division margibi 6.6053676 -10.1758428 division maryland 39.5162234 -76.9382068 division massachusetts 42.3788774 -72.0323659 division michigan 43.6211955 -84.6824345 division minnesota 45.9896587 -94.6113287 division mississippi 32.9715645 -89.7348496 division montana 47.3752671 -109.6387578 division montserrado 6.4095537 -10.6059402 division moyamba 8.159153 -12.4314373 division nebraska 41.7370229 -99.5873815 division nevada 39.5158825 -116.8537226 division new_hampshire 43.4718339 -71.6182147 division new hampshire 43.4718339 -71.6182147 division new_mexico 34.5708167 -105.9930069 division new mexico 34.5708167 -105.9930069 division new_york 40.7642499 -73.9545249 division new york 40.7642499 -73.9545249 division nimba 6.8088813 -8.7461447 division new_jersey 40.0757384 -74.4041621 division new jersey 40.0757384 -74.4041621 division north_carolina 35.6729639 -79.0392918 division north carolina 35.6729639 -79.0392918 division north_dakota 47.6201461 -100.5407369 division north dakota 47.6201461 -100.5407369 division nzerekore 7.7579345 -8.8176067 division ohio 40.2253569 -82.6881394 division oklahoma 34.9550817 -97.2684062 division ontario 50.0000002 -86.0 division oregon 43.9792797 -120.7372569 division pennsylvania 40.9699889 -77.727883 division port_loko 8.7638892 -12.7799026 division port loko 8.7638892 -12.7799026 division pujehun 7.35633 -11.722668 division river_gee 5.2653903 -7.8856202 division river gee 5.2653903 -7.8856202 division rivercess 5.9087331 -9.3938266 division scotland 56.7861112 -4.1140517 division siguiri 11.4189557 -9.1745795 division sinoe 5.3232693 -8.8435954 division south_carolina 33.6874388 -80.4363742 division south carolina 33.6874388 -80.4363742 division south_dakota 44.6471761 -100.3487609 division south dakota 44.6471761 -100.3487609 division tennessee 35.7730076 -86.282008 division texas 31.8160381 -99.5120985 division tonkolili 8.979884 -11.717715 division utah 39.4225192 -111.7143583 division vermont 44.5990718 -72.5002607 division virginia 37.1232245 -78.492772 division washington 47.60 -122.33 division west_virginia 38.4758406 -80.8408414 division west virginia 38.4758406 -80.8408414 division western_area 8.33461895 -13.0659143446 division western area 8.33461895 -13.0659143446 division western_rural 8.320091 -13.0588080718 division western rural 8.320091 -13.0588080718 division western_urban 8.4365934 -13.239469946 division western urban 8.4365934 -13.239469946 division wisconsin 44.4308975 -89.6884636 division wyoming 43.1700264 -107.5685347 augur-24.2.2/augur/data/schema-annotations.json000066400000000000000000000065301456376326500214730ustar00rootroot00000000000000{ "type" : "object", "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/augur/annotations", "title": "Schema for the 'annotations' property (node-data JSON) or the 'genome_annotations' property (auspice JSON)", "properties": { "nuc": { "type": "object", "allOf": [{ "$ref": "#/$defs/startend" }], "properties": { "start": { "enum": [1], "$comment": "nuc must begin at 1" }, "strand": { "type": "string", "enum":["+"], "description": "Strand is optional for nuc, as it should be +ve for all genomes (-ve strand genomes are reverse complemented)", "$comment": "Auspice will not proceed if the JSON has strand='-'" } }, "additionalProperties": true, "$comment": "All other properties are unused by Auspice." } }, "required": ["nuc"], "patternProperties": { "^(?!nuc)[a-zA-Z0-9*_-]+$": { "$comment": "Each object here defines a single CDS", "type": "object", "oneOf": [{ "$ref": "#/$defs/startend" }, { "$ref": "#/$defs/segments" }], "additionalProperties": true, "required": ["strand"], "properties": { "gene": { "type": "string", "description": "The name of the gene the CDS is from. Optional.", "$comment": "Shown in on-hover infobox & influences default CDS colors" }, "strand": { "description": "Strand of the CDS", "type": "string", "enum": ["-", "+"] }, "color": { "type": "string", "description": "A CSS color or a color hex code. Optional." }, "display_name": { "type": "string", "$comment": "Shown in the on-hover info box" }, "description": { "type": "string", "$comment": "Shown in the on-hover info box" } } } }, "$defs": { "startend": { "type": "object", "required": ["start", "end"], "properties": { "start": { "type": "integer", "minimum": 1, "description": "Start position (one-based, following GFF format)" }, "end": { "type": "integer", "minimum": 2, "description": "End position (one-based, following GFF format). This value _must_ be greater than the start." } } }, "segments": { "type": "object", "required": ["segments"], "properties": { "segments": { "type": "array", "minItems": 1, "items": { "type": "object", "allOf": [{ "$ref": "#/$defs/startend" }] } } } } } } augur-24.2.2/augur/data/schema-auspice-config-v2.json000066400000000000000000000322021456376326500223520ustar00rootroot00000000000000{ "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/auspice/config/v2", "type": "object", "title": "Auspice config file to be supplied to `augur export v2`", "$comment": "This schema includes deprecated-but-handled-by-augur-export-v1 properties, but their schema definitions are somewhat incomplete", "additionalProperties": false, "required": [], "properties" : { "title": { "description": "Title to be displayed in auspice", "type" : "string" }, "colorings": { "description": "Traits available as color-by options", "type": "array", "items": { "type": "object", "description": "Each object here is an individual coloring, which will populate the sidebar dropdown in auspice", "additionalProperties": false, "required": ["key"], "properties": { "key": { "description": "They key used to access the value of this coloring on each node", "type": "string" }, "title": { "description": "Text to be displayed in the \"color by\" dropdown and legends", "$comment": "string is parsed unchanged by Auspice", "type": "string" }, "type": { "description": "Defines how the color scale should be constructed", "$comment": "[augur export v2] will (try to) infer the type if this is not present", "type": "string", "enum": ["continuous", "temporal", "ordinal", "categorical", "boolean"] }, "scale": { "description": "Provided mapping between trait values & hex values. For continuous scales at least 2 items must be specified", "$comment": "[auspice export v2] preferentially uses this over colors TSV", "type": "array", "items": { "type": "array", "items": [ { "type": ["string", "number"], "description": "For categorical/ordinal scales, this is the (string) value of the trait to associate with the colour. For continuous scales this is the (numeric) value to associate with the colour, and interpolation will be used to span the domain" }, {"type": "string", "description": "color hex value", "pattern": "^#[0-9A-Fa-f]{6}$"} ] } }, "legend": { "description": "Specify the entries displayed in the legend. This can be used to restrict the entries in the legend for display without otherwise affecting the data viz", "type": "array", "items": { "type": "object", "required": ["value"], "properties": { "value": { "description": "value to associate with this legend entry. Used to determine colour. For non-continuous scales this also determines the matching between legend items and data.", "type": ["string", "number"], "$comment": "Continuous scales must use a numeric value. Other scales can use either." }, "display": { "description": "Label to display in the legend. Optional - `value` will be used if this is not provided.", "type": ["string", "number"] }, "bounds": { "description": "(for continuous scales only) provide the lower & upper bounds to match data to this legend entry. Bounds from different legend entries must not overlap. Matching is (a, b] - exclusive of the lower bound, inclusive of the upper.", "type": "array", "items": [ {"type": "number", "description": "lower bound"}, {"type": "number", "description": "upper bound"} ] } } } } } } }, "color_options": { "description": "DEPRECATED v1 syntax for defining colorings", "deprecated": true, "type": "object" }, "geo_resolutions": { "description": "Traits to be interpreted as 'geo resolution' options -- i.e. associated with lat/longs & made points on the map", "$comment": "Note that array entries can be different structures & you can mix & match", "type": "array", "uniqueItems": true, "minItems": 1, "items": { "oneOf": [ { "type": "object", "description": "An indiviual geo resolution", "additionalProperties": false, "required": ["key"], "properties": { "key": { "type": "string", "description": "Trait key - must be specified on nodes (e.g. 'country')" }, "title": { "type": "string", "description": "The title to display in the geo resolution dropdown. Optional -- if not provided then `key` will be used." } } }, { "type": "string", "description": "An indiviual geo resolution key" } ] } }, "geo": { "description": "DEPRECATED v1 syntax for defining geo_resolutions", "deprecated": true, "type": "array" }, "maintainers": { "description": "Who maintains this dataset?", "$comment": "order similar to a publication", "type": "array", "uniqueItems": true, "minItems": 1, "items": { "type": "object", "properties": { "name": {"type": "string"}, "url": {"type": "string"} }, "required": ["name"] } }, "maintainer": { "description": "DEPRECATED v1 syntax for defining maintainers (but you could only define one!)", "deprecated": true, "type": "array" }, "build_url": { "description": "URL with instructions to reproduce build, usually expected to be a GitHub repo URL", "$comment": "Auspice displays this at the top of the page as part of a byline", "type": "string" }, "filters": { "description": "These appear as filters in the footer of Auspice (which populates the displayed values based upon the tree)", "$comment": "These values must be present as keys on a tree node -> trait", "type": "array", "uniqueItems": true, "items": {"type": "string"} }, "display_defaults": { "description": "Set the defaults for certain display options in Auspice. All are optional.", "$comment": "Anything able to be encoded in the auspice URL should eventually be an option here, so this will expand over time", "type": "object", "additionalProperties": false, "properties": { "map_triplicate": { "type": "boolean" }, "geo_resolution": { "$comment": "The value here must be present in geo_resolutions (see above)", "type": "string" }, "color_by": { "$comment": "The value here must be present in the colorings (see above)", "type": "string" }, "distance_measure": { "type": "string", "enum": ["num_date", "div"] }, "layout": { "type": "string", "enum": ["rect", "radial", "unrooted", "clock"] }, "branch_label": { "description": "What branch label should be displayed by default, or 'none' to hide labels by default.", "$comment": "Should be a key present in the per-node branch_attrs.labels object of the exported JSON; pattern is from the schema for that object", "type": "string", "pattern": "^(none|[a-zA-Z0-9]+)$" }, "tip_label": { "description": "What tip label should be displayed by default, or 'none' to hide labels by default.", "$comment": "Should be a key present in (at least some) node_attrs", "type": "string" }, "transmission_lines": { "$comment": "Transmission lines depend on the geo_resolution being defined for internal nodes", "type": "boolean" }, "language": { "type": "string", "minLength": 1, "description": "A BCP 47 language tag specifying the default language in which to display Auspice's interface (if supported)" }, "sidebar": { "type": "string", "enum": ["open", "closed"] }, "panels": { "type": "array", "description": "Panels which start toggled on (default is for all available to be shown)", "minItems": 1, "items": { "type": "string", "enum": ["tree", "map", "frequencies", "entropy"] } } } }, "defaults": { "description": "DEPRECATED v1 syntax for defining auspice view defaults", "deprecated": true, "type": "object" }, "updated": { "description": "DEPRECATED v1 (or older) syntax for defining when the build was updated", "$comment": "unused in augur v6", "deprecated": true, "type": "string" }, "panels": { "description": "The panels available for display", "$comment": "The frequencies & measurements panel will only be available if defined here (and if their sidecar files are available)", "type": "array", "minItems": 1, "items": { "type": "string", "enum": ["tree", "map", "frequencies", "entropy", "measurements"] } }, "vaccine_choices": { "type": "object", "description": "UNUSED v1 syntax for defining vaccine choices", "$comment": "This is unused in `augur export v2` which gets vaccine info vis a node-data JSON file. It remains in the schema so that v1 config files can be used by `augur export v2`" }, "data_provenance": { "description": "Specify provenance of data included in this analysis", "type": "array", "minItems": 1, "items": { "type": "object", "description": "An individual data source", "additionalProperties": false, "required": ["name"], "properties": { "name": { "description": "Name of the data source", "type": "string" }, "url": { "description": "URL to use in link to data source", "type": "string" } } } }, "metadata_columns": { "description": "Metadata TSV columns to export in addition to columns provided as colorings.", "$comment": "These columns will not be used as coloring options in Auspice but will be visible in the tree.", "type": "array", "uniqueItems": true, "items": {"type": "string"} }, "extensions": { "description": "Data to be passed through to the the resulting dataset JSON", "$comment": "Any type is accepted" } } } augur-24.2.2/augur/data/schema-export-root-sequence.json000066400000000000000000000025651456376326500232520ustar00rootroot00000000000000{ "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/dataset/root-sequence", "title": "Nextstrain root-sequence sidecar for datasets", "description": "Typically produced by Augur and consumed by Auspice. Applicable to the `--root-sequence` output of `augur export v2` as well as the `--output-sequence` option of `augur export v1`.", "oneOf": [ { "$comment": "This is sort of weird, but `augur export v1` can explicitly produce an empty object.", "description": "An empty object", "type": "object", "properties": {}, "additionalProperties": false }, { "description": "An object containing at least a \"nuc\" key and optionally additional keys for genome annotations (e.g. genes)", "type": "object", "required": ["nuc"], "properties": { "nuc": { "description": "Nucleotide sequence of whole genome (from the output of `augur ancestral`)", "type": "string" } }, "patternProperties": { "^[a-zA-Z0-9*_-]+$": { "$comment": "This pattern is the same pattern used in the corresponding parts of schema-export-v2.json.", "description": "Amino acid sequence of genome annotation (e.g. gene) identified by this key (from the output of `augur translate`)", "type": "string" } } } ] } augur-24.2.2/augur/data/schema-export-v1-meta.json000066400000000000000000000260111456376326500217230ustar00rootroot00000000000000{ "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/dataset/v1/meta", "type": "object", "title": "Nextstrain minimal metadata JSON schema", "description": "This is the validation schema for the augur produced metadata JSON, for consumption in Auspice. Note that every field is optional, but excluding fields may disable certain features in Auspice.", "additionalProperties": true, "properties" : { "title" : { "description": "Auspice displays this at the top of the page", "type" : "string" }, "updated" : { "description": "Auspice displays this in the footer", "type" : "string" }, "virus_count" : { "description": "Auspice uses this in the header info text and the status page. Should be renamed or deprecated for version 1.0", "type" : "number" }, "author_info": { "description": "Used to display information about terminal nodes & for filtering by author (if \"authors\" is in \"filters\", see below)", "$comment": "Each key is typically an author name, e.g. \"Black et al\", and must exist in the attrs object of at least one terminal node of the tree", "type": "object", "additionalProperties": false, "patternProperties": { "^.+$": { "type": "object", "additionalProperties": false, "$comment": "in the future these properties may be required", "properties": { "n": { "description": "Number of sequences / samples associated with this publication", "type": "number" }, "title": { "description": "Publication title", "type": "string" }, "journal": { "description": "Journal title", "type": "string" }, "paper_url": { "description": "URL link to paper or NCBI genome. Use \"?\" if unknown", "type": "string", "oneOf": [ {"pattern": "^https?://.+$"}, {"enum": ["?"]} ] } } } } }, "annotations": { "description": "Genome annotations (e.g. genes), relative to the reference genome", "$comment": "Required for the entropy panel", "type": "object", "required": ["nuc"], "additionalProperties": false, "properties": { "nuc": { "type": "object", "properties": { "start": { "description": "Gene start position (zero-based, i.e. BED format)", "type": "number" }, "end": { "description": "Gene end position (zero-based half open, i.e. BED format)", "type": "number" }, "strand": { "description": "Positive or negative strand", "type": "number", "enum": [-1, 1] } } } }, "patternProperties": { "^[a-zA-Z0-9*_-]+$": {"$ref": "#/properties/annotations/properties/nuc"} } }, "maintainer": { "description": "Auspice displays the maintainer in the footer", "type": "array", "items": [ { "type": "string", "description": "Text displayed in the browser" }, { "type": "string", "description": "href for the text. E.g. mailto:, twitter link, lab website" } ] }, "filters": { "description": "These appear as filters in the footer of Auspice (which populates the displayed values based upon the tree)", "$comment": "These values must be present as keys on the attr of nodes on the tree", "type": "array", "uniqueItems": true, "items": {"type": "string"} }, "panels": { "description": "Which panels should Auspice display?", "type": "array", "items": { "type": "string", "enum": ["tree", "map", "frequencies", "entropy"] }, "uniqueItems": true, "minItems": 1 }, "geo": { "description": "The available options for the geographic resolution dropdown", "type": "object", "patternProperties": { "^[a-z]*$": { "description": "The names of the geographic resolutions", "$comment": "E.g. country or region. These need to be present as keys in the attrs of the tree nodes", "type": "object", "patternProperties": { "^[a-z_]*$": { "description": "The values (of the demes) for this geographic resolutions", "$comment": "E.g. Brazil, China etc. The tree nodes must contain these as values of the geographic resolution key", "type": "object", "additionalProperties": false, "properties": { "latitude": { "type": "number", "minimum": -180, "maximum": 180 }, "longitude": { "type": "number", "minimum": -180, "maximum": 180 } } } } } } }, "color_options": { "description": "Available colorBys for Auspice", "$comment": "These properties need to be present as keys in the attrs of the tree nodes", "type": "object", "additionalProperties": false, "patternProperties": { "^[A-Za-z_]*$": { "description": "property name is the key used on the tree node attrs", "type": "object", "properties": { "key": { "description": "???", "type": "string" }, "menuItem": { "description": "Text to be displayed in the \"color by\" dropdown menu", "type": "string" }, "legendTitle": { "description": "Text to be displayed in the \"color by\" tree menu", "type": "string" }, "type": { "description": "Dictates how the color scale should be made", "type": "string", "enum": ["continuous", "discrete"] }, "color_map": { "description": "Links values to colors. Enforces a discrete scale, no matter what the \"type\" property is.", "$comment": "A greyscale ramp will be used for missing values (i.e. defined on the tree but not here)", "type": "array", "uniqueItems": true, "items": { "type": "array", "additionalItems": false, "items": [ { "description": "value (tree nodes -> attrs -> propertyName)", "type": "string", "pattern": "^[ 0-9A-Za-z_.-]+$" }, { "description": "color hex value", "type": "string", "pattern": "^#[0-9A-Fa-f]{6}$" } ] } } } } } }, "defaults": { "description": "Set the defaults for certain display options in Auspice. All are optional.", "type": "object", "additionalProperties": false, "properties": { "geoResolution": { "description": "Default geographic resolution", "$comment": "The value here must be present in the geo object (see above)", "type": "string" }, "colorBy": { "description": "Default color by", "$comment": "The value here must be present in the color_options object (see above)", "type": "string" }, "distanceMeasure": { "description": "Default tree metric", "type": "string", "enum": ["div", "num_date"] }, "mapTriplicate": { "description": "Should the map be extended / wrapped around. Useful if transmissions are worldwide.", "type": "boolean" } } }, "commit": { "description": "Augur commit used to prepare these JSONs", "$comment": "DEPRECATED. Will be replaced with version in 0.1", "type": "string" }, "controls": { "$comment": "DEPRECATED" }, "seq_author_map": { "$comment": "DEPRECATED" }, "vaccine_choices": { "description": "Vaccine strains displayed in Auspice", "type": "object", "patternProperties": { "^.+$": { "description": "Strain names", "$comment": "must exist as a strain name on the tree. Currently the value is unused.", "type": "string", "pattern": "^[0-9X]{4}-[0-9X]{2}-[0-9X]{2}$" } } } } } augur-24.2.2/augur/data/schema-export-v1-tree.json000066400000000000000000000146101456376326500217360ustar00rootroot00000000000000{ "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/dataset/v1/tree", "type": "object", "title": "Nextstrain tree JSON schema", "additionalProperties": false, "required": ["attr", "strain"], "properties": { "attr": { "description": "Attributes / decorations on the nodes", "type": "object", "additionalProperties": true, "required": ["div", "num_date"], "properties": { "div": { "description": "Node (phylogenetic) divergence", "$comment": "Cumulative (root = 0)", "type": "number" }, "num_date": { "description": "Node date", "$comment": "Year in decimal format", "type": "number" }, "num_date_confidence": { "description": "Confidence of the node date", "type": "array", "items": [ {"type": "number"}, {"type": "number"} ] }, "date": { "description": "Node date", "$comment": "Is this used? Should only use this or num_date", "type": "string", "pattern": "^[0-9X]{4}-[0-9X]{2}-[0-9X]{2}$" }, "clock_length": { "$comment": "DEPRECATED. Not used in auspice.", "type": "number" }, "mutation_length": { "$comment": "DEPRECATED. Not used in auspice.", "type": "number" }, "branch_length": { "$comment": "DEPRECATED. Not used in auspice.", "type": "number" }, "url": { "description": "URL of the sequence (usually https://www.ncbi.nlm.nih.gov/nuccore/...)", "type": ["null", "string"] }, "accession": { "description": "Genome accession", "oneOf": [ { "type": "string", "pattern": "^[0-9A-Za-z-]+$" }, { "type": "null" } ] }, "authors": { "description": "Author lookup key for the relevant publication / credit", "$comment": "Should have a corresponding entry in the meta JSON author_info property", "type": ["null", "string"] } }, "patternProperties": { "^.*_confidence$": { "description": "confidence values for trait", "$comment": "The trait must exist. This cannot be checked for in the JSON schema AFAIK", "oneOf": [ { "description": "", "type": "object", "patternProperties": { "^.+$": { "type": "number" } } }, { "description": "", "type": "array", "items": [ {"type": "number"}, {"type": "number"} ] } ] }, "^.*_entropy$": { "description": "", "type": "number" } } }, "branch_length": { "$comment": "DEPRECATED. Not used in auspice.", "type": "number" }, "strain": { "description": "Strain name. Must be unique", "type": "string" }, "clade": { "description": "Will be removed in schema 2.0", "type": ["number"] }, "tvalue": { "$comment": "DEPRECATED. Not used in auspice.", "type": ["null", "number"] }, "yvalue": { "$comment": "DEPRECATED. Not used in auspice.", "type": ["null", "number"] }, "xvalue": { "$comment": "DEPRECATED. Not used in auspice.", "type": ["null", "number"] }, "serum": { "description": "to do", "$comment": "Used in dengue & flu trees", "type": "boolean" }, "muts": { "description": "Nucleotide mutations occuring between the parent and this node", "$comment": "same numbering scheme as used by the meta.JSON -> annotations", "type": "array", "items": { "oneOf": [ {"type": "string", "pattern": "^[ATCGNYRWSKMDVHB-][0-9]+[ATCGNYRWSKMDVHB-]$"}, {"type": "string", "pattern": "^insertion [0-9]+-[0-9]+$", "$comment": "unused by auspice"}, {"type": "string", "pattern": "^deletion [0-9]+-[0-9]+$", "$comment": "unused by auspice"} ] } }, "aa_muts": { "description": "Amino-acid mutations (for each gene) occuring between the parent and this node", "$comment": "properties (keys) must exist in the meta.JSON -> annotation object, and cannot be \"nuc\"", "type": "object", "additionalProperties": false, "patternProperties": { "^[a-zA-Z0-9*_-]+$": { "description": "Mutations for this gene (or annotated region)", "type": "array", "items": { "pattern": "^[A-Z*][0-9]+[A-Z*]$" } } } }, "children": { "description": "Child nodes. Recursive structure. Terminal nodes do not have this property.", "$comment": "Polytomies (more than 2 items) allowed.", "type": "array", "minItems": 2, "items": {"$ref": "#"} } } } augur-24.2.2/augur/data/schema-export-v2.json000066400000000000000000000420151456376326500210020ustar00rootroot00000000000000{ "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/dataset/v2", "type": "object", "title": "Nextstrain dataset v2", "description": "Typically produced by Augur (`augur export v2`) and consumed by Auspice. Combines dataset v1 meta and tree files together into one file, with additional changes.", "additionalProperties": false, "required": ["version", "meta", "tree"], "properties": { "version" : { "description": "Major schema version", "const": "v2" }, "meta": { "type": "object", "$comment": "Metadata associated with phylogeny", "additionalProperties": false, "required": ["updated", "panels"], "properties" : { "title" : { "description": "Auspice displays this at the top of the page", "type" : "string" }, "updated" : { "description": "Auspice displays this (currently only in the footer)", "type" : "string", "pattern": "^[0-9X]{4}-[0-9X]{2}-[0-9X]{2}$" }, "build_url" : { "$ref": "https://nextstrain.org/schemas/auspice/config/v2#/properties/build_url" }, "description" : { "description": "Auspice displays this currently in the footer.", "$comment": "Generally a description of the phylogeny and/or acknowledgements in Markdown format.", "type": "string" }, "maintainers": { "$ref": "https://nextstrain.org/schemas/auspice/config/v2#/properties/maintainers" }, "genome_annotations": { "$ref": "https://nextstrain.org/schemas/augur/annotations" }, "filters": { "$ref": "https://nextstrain.org/schemas/auspice/config/v2#/properties/filters" }, "panels": { "$ref": "https://nextstrain.org/schemas/auspice/config/v2#/properties/panels" }, "extensions": { "$ref": "https://nextstrain.org/schemas/auspice/config/v2#/properties/extensions" }, "geo_resolutions": { "description": "The available options for the geographic resolution dropdown, and their lat/long information", "type": "array", "minItems": 1, "items": { "type": "object", "description": "Each object here is an individual geo resolution", "additionalProperties": false, "required": ["key", "demes"], "properties": { "key": { "type": "string", "description": "Trait key - must be specified on nodes (e.g. 'country')" }, "title": { "type": "string", "description": "The title to display in the geo resolution dropdown. Optional -- if not provided then `key` will be used." }, "demes": { "type": "object", "description": "Mapping from deme (trait values) to lat/long", "$comment": "Each value defined across the tree needs to be present here, else Auspice cannot display the deme appropriately", "patternProperties": { "^[a-z_]+$": { "type": "object", "additionalProperties": false, "properties": { "latitude": { "type": "number", "minimum": -90, "maximum": 90 }, "longitude": { "type": "number", "minimum": -180, "maximum": 180 } } } } } } } }, "colorings": { "type": "array", "items": { "allOf": [ {"$ref": "https://nextstrain.org/schemas/auspice/config/v2#/properties/colorings/items"} ], "required": ["key", "type"] } }, "display_defaults": { "$ref": "https://nextstrain.org/schemas/auspice/config/v2#/properties/display_defaults" }, "data_provenance": { "$ref": "https://nextstrain.org/schemas/auspice/config/v2#/properties/data_provenance" } } }, "tree": { "description": "One or more phylogenies using a nested JSON structure", "oneOf": [ {"$ref": "#/$defs/tree"}, { "type": "array", "minItems": 1, "items": {"$ref": "#/$defs/tree"} } ] }, "root_sequence": { "$ref": "https://nextstrain.org/schemas/dataset/root-sequence" } }, "$defs": { "tree": { "type" : "object", "$comment": "The phylogeny in a nested JSON structure", "additionalProperties": false, "required": ["name", "node_attrs"], "properties": { "name": { "description": "Strain name. Must be unique. No spaces", "type": "string" }, "node_attrs": { "description": "attributes associated with the node (sequence, date, location) as opposed to changes from one node to another.", "type": "object", "anyOf": [ {"required": ["div"]}, {"required": ["num_date"]} ], "properties": { "div": { "description": "Node (phylogenetic) divergence", "$comment": "Cumulative (root = 0)", "type": "number" }, "num_date": { "$comment": "Sample date in decimal format (e.g. 2012.1234)", "$comment": "This is the only date information. We no longer have string dates.", "type": "object", "required": ["value"], "properties": { "value": {"type": "number"}, "confidence": { "description": "Confidence of the node date", "type": "array", "items": [ {"type": "number"}, {"type": "number"} ] } } }, "vaccine": { "description": "Vaccine information", "properties": { "serum": { "description": "strain used to raise sera (for ???)", "$comment": "Currently in the flu & dengue trees", "type": "boolean" }, "selection_date": { "description": "Vaccine selection date", "$comment": "this is currently in the metadata JSON", "type": "string", "pattern": "^[0-9X]{4}-[0-9X]{2}-[0-9X]{2}$" }, "start_date": { "description": "Vaccine usage start date", "type": "string", "pattern": "^[0-9X]{4}-[0-9X]{2}-[0-9X]{2}$" }, "end_date": { "description": "When the vaccine was stopped", "$comment": "if vaccine still in use, don't include this property", "type": "string", "pattern": "^[0-9X]{4}-[0-9X]{2}-[0-9X]{2}$" } } }, "hidden": { "$comment": "Instruct auspice to hide the branches from this node to it's children", "type": "string", "enum": ["always", "timetree", "divtree"] }, "url": { "description": "URL of the sequence (usually https://www.ncbi.nlm.nih.gov/nuccore/...)", "$comment": "terminal nodes only", "type": "string", "pattern": "^https?://.+$" }, "author": { "description": "Author information (terminal nodes only)", "type": "object", "required": ["value"], "properties": { "value": { "description": "unique value for this publication. Displayed as-is by auspice.", "type": "string" }, "title": { "description": "Publication title", "type": "string" }, "journal": { "description": "Journal title (including year, if applicable)", "type": "string" }, "paper_url": { "description": "URL link to paper (if available)", "type": "string", "pattern": "^https?://.+$" } } }, "accession": { "description": "Sequence accession number", "$comment": "terminal nodes only", "type": "string", "pattern": "^[0-9A-Za-z-_.]+$" } }, "patternProperties": { "(?!div|num_date|vaccine|hidden|url|author|accession)(^.+$)": { "description": "coloring / geo resolution information attached to this node", "$comment": "property name must match the `key` property provided as a coloring / geo_resolution", "$comment": "JSON schema defined properties must also validate agaisnt patternProperties if they match. Hence the complex regex.", "type": "object", "required": ["value"], "properties": { "value": { "type": ["string", "number", "boolean"] }, "confidence": { "description": "Confidence of the trait date", "$comment": "Should we use different keys for the two structures here?", "oneOf": [ { "type": "array", "$comment": "Only used if the value is numeric", "items": [ {"type": "number"}, {"type": "number"} ] }, { "type": "object", "$comment": "Only used if the value is a string", "$comment": "alternative possibilities & their confidence values", "patternProperties": { "^.+$": { "type": "number", "minimum": 0.0, "maximum": 1.0 } } } ] }, "entropy": { "$comment": "Auspice uses this to control opacity of the color-by", "type": "number" } } } } }, "branch_attrs": { "description": "attributes associated with the branch from the parent node to this node, such as branch lengths, mutations, support values", "type": "object", "properties": { "labels": { "description": "Node labels", "$comment": "Auspice scans this to generate the branch labels dropdown", "patternProperties": { "^[a-zA-Z0-9]+$": { "$comment": "e.g. clade->3c3a", "$comment": "string is parsed unchanged by Auspice", "type": "string" } } }, "mutations": { "description": "Mutations on the branch leading to this node. 1-based numbering (same as genome_annotations)", "type": "object", "additionalProperties": false, "properties": { "nuc": { "description": "nucleotide mutations", "type": "array", "items": { "type": "string", "pattern": "^[ATCGNYRWSKMDVHB-][0-9]+[ATCGNYRWSKMDVHB-]$" } } }, "patternProperties": { "^(?!nuc)[a-zA-Z0-9*_-]+$": { "description": "Amino acid mutations for this CDS", "$comment": "properties must exist in the meta.JSON -> annotation object", "type": "array", "items": { "pattern": "^[A-Z*-][0-9]+[A-Z*-]$" } } } } } }, "children": { "description": "Child nodes. Recursive structure. Terminal nodes do not have this property.", "$comment": "Polytomies (more than 2 items) allowed, as are nodes with a single child.", "type": "array", "minItems": 1, "items": {"$ref": "#/$defs/tree"} } } } } } augur-24.2.2/augur/data/schema-frequencies.json000066400000000000000000000103071456376326500214440ustar00rootroot00000000000000{ "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/augur/frequencies", "title": "`augur frequencies` output", "description": "This schema describes the various forms of `augur frequencies` output when using the default `--output-format=auspice`. The specific form used depends on the input parameters, as noted for each possible form below. One of the forms is compatible with the Nextstrain tip-frequencies sidecar described by .", "$comment": "For historical context (some, not complete) on the development of this format, see and .", "oneOf": [ { "description": "`augur frequencies` with an input `--tree` and `--method=diffusion`", "type": "object", "required": ["pivots", "counts"], "properties": { "counts": { "description": "Counts by region", "type": "object", "additionalProperties": { "description": "Counts for region identified by this key", "type": "array", "items": {"type": "integer"} } }, "pivots": {"$ref": "#/$defs/pivots"}, "generated_by": {"$ref": "#/$defs/generated_by"} }, "additionalProperties": { "description": "Estimated frequencies by region for tip (or node) identified by this key", "type": "object", "additionalProperties": { "description": "Estimated frequencies for region identified by this key", "type": "array", "items": {"type": "number"} } } }, { "description": "`augur frequencies` with an input `--tree` and `--method=kde`, compatible with ", "type": "object", "required": ["pivots"], "properties": { "pivots": {"$ref": "#/$defs/pivots"}, "generated_by": {"$ref": "#/$defs/generated_by"} }, "additionalProperties": { "description": "Estimated frequencies for tip (or node) identified by this key", "type": "object", "properties": { "frequencies": { "type": "array", "items": {"type": "number"} } }, "additionalProperties": false } }, { "description": "`augur frequencies` with input gene `--alignments` and `--method=diffusion`", "type": "object", "required": ["pivots"], "properties": { "pivots": {"$ref": "#/$defs/pivots"}, "generated_by": {"$ref": "#/$defs/generated_by"} }, "patternProperties": { "^(.+):counts$": { "description": "Counts for gene alignment position+state identified by this key (:counts)", "type": "array", "items": {"type": "integer"} }, "^(.+):([0-9]+)(.+)$": { "description": "Estimated frequencies for gene alignment position+state identified by this key (:)", "type": "array", "items": {"type": "number"} } }, "additionalProperties": false }, { "description": "`augur frequencies` with input gene `--alignments` and `--method=kde`", "type": "object", "required": ["pivots"], "properties": { "pivots": {"$ref": "#/$defs/pivots"}, "generated_by": {"$ref": "#/$defs/generated_by"} }, "patternProperties": { "^(.+):([0-9]+)(.+)$": { "description": "Estimated frequencies for gene alignment position+state identified by this key (:)", "type": "array", "items": {"type": "number"} } }, "additionalProperties": false } ], "$defs": { "pivots": { "description": "Pivot dates as floating point numbers (YYYY.nnnnnn)", "type": "array", "items": {"type": "number"}, "minItems": 1, "uniqueItems": true }, "generated_by": { "description": "Information about the software which produced the file", "type": "object", "properties": { "program": {"type": "string"}, "version": {"type": "string"} } } } } augur-24.2.2/augur/data/schema-measurements-collection-config.json000066400000000000000000000131441456376326500252410ustar00rootroot00000000000000{ "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/dataset/measurements/collection/config", "title": "Collection config file to be supplied to `augur measurements export`", "type": "object", "additionalProperties": false, "required": [], "properties": { "key": { "description": "The short name of the collection that is only used internally within Auspice. Each collection is expected to have a unique key.", "type": "string" }, "title": { "description": "The title to display in the collections dropdown and panel title. Optional -- if not provided, then `key` will be used", "type": "string" }, "fields": { "description": "Custom field order and display titles. Order of the fields determines the order they are shown in the measurement hover display. Optional -- if not provided, then the key of the field will be displayed in alphabetical order.", "type": "array", "minItems": 1, "items": { "description": "A single field of the measurements", "type": "object", "additionalProperties": false, "required": ["key"], "properties": { "key": { "description": "The property name of the field within the measurement object", "type": "string" }, "title": { "description": "The display title for the field. Optional -- if not provided, then `key` will be used", "type": "string" } } } }, "groupings": { "description": "The available group by fields for measurements. Order of the group by fields determines the order they are shown in the group by dropdown.", "type": "array", "minItems": 1, "items": { "description": "A single group by field for measurements", "type": "object", "additionalProperties": false, "required": ["key"], "properties": { "key": { "description": "The property name of the group by field within the measurement object", "type": "string" }, "order": { "description": "A custom order of group by values to customize the display order of the subplots when using group by field", "type": "array", "minItems": 1, "items": { "description": "A single value of the group by field present in measurements", "type": ["string", "number", "boolean"] } } } } }, "filters": { "description": "The available filter options for measurements. Order of the filter options determines the order they are shown in the filter dropdown. Optional -- if not provided, then all fields will be available as filters.", "type": "array", "minItems": 1, "items": { "description": "The property name of the filter field within the measurement object", "type": "string" } }, "x_axis_label": { "description": "The short label to display for the x-axis that describes the `value` of the measurements in a collection", "type": "string" }, "thresholds": { "description": "Numeric measurement thresholds to be displayed as solid grey lines across subplots. Optional -- if not provided, no threshold will be displayed.", "type": "array", "minItems": 1, "items": { "description": "A numeric measurement threshold value.", "type": "number" } }, "threshold": { "deprecated": true, "description": "DEPRECATED - A numeric measurement threshold to be displayed as a single grey line shared across subplots. Will be ignored if 'thresholds' is provided.", "type": "number" }, "display_defaults": { "description": "Default display options of the collection", "type": "object", "additionalProperties": false, "minProperty": 1, "properties": { "group_by": { "description": "Default group by field name that must be included as a group by option in the groupings array. Optional -- if not provided, first group by option will be used", "type": "string" }, "measurements_display": { "description": "Dictates how the measurements are displayed, either as the raw data points or as the means of values grouped by the tree color-by attribute", "type": "string", "enum": ["raw", "mean"] }, "show_overall_mean": { "description": "Should the overall mean per group be displayed by default?", "type": "boolean" }, "show_threshold": { "description": "Should the threshold line be displayed by default? Ignored if no threshold has been provided for collection", "type": "boolean" } } } } } augur-24.2.2/augur/data/schema-measurements.json000066400000000000000000000225371456376326500216530ustar00rootroot00000000000000{ "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/dataset/measurements", "title": "Nextstrain measurements sidecar for datasets", "description": "Typically produced by Augur and consumed by Auspice.", "type": "object", "additionalProperties": false, "required": ["collections"], "properties": { "default_collection": { "description": "Default collection to display. The value must be a `key` in one of the objects of the collections array. Optional -- if not provided, first collection will be displayed", "type": "string" }, "collections": { "description": "Collections of measurements and their configurations for display in Auspice. Order of the collections determines the order they are shown in the collections dropdown.", "type": "array", "minItems": 1, "items": { "description": "A single collection of related measurements and the collection's display config", "type": "object", "additionalProperties": false, "required": ["key", "groupings", "x_axis_label", "measurements"], "properties": { "key": { "description": "The short name of the collection that is only used internally within Auspice. Each collection is expected to have a unique key.", "type": "string" }, "title": { "description": "The title to display in the collections dropdown and panel title. Optional -- if not provided, then `key` will be used", "type": "string" }, "fields": { "description": "Custom field order and display titles. Order of the fields determines the order they are shown in the measurement hover display. Optional -- if not provided, then the key of the field will be displayed in alphabetical order.", "type": "array", "minItems": 1, "items": { "description": "A single field of the measurements", "type": "object", "additionalProperties": false, "required": ["key"], "properties": { "key": { "description": "The property name of the field within the measurement object", "type": "string" }, "title": { "description": "The display title for the field. Optional -- if not provided, then `key` will be used", "type": "string" } } } }, "groupings": { "description": "The available group by fields for measurements. Order of the group by fields determines the order they are shown in the group by dropdown.", "type": "array", "minItems": 1, "items": { "description": "A single group by field for measurements", "type": "object", "additionalProperties": false, "required": ["key"], "properties": { "key": { "description": "The property name of the group by field within the measurement object", "type": "string" }, "order": { "description": "A custom order of group by values to customize the display order of the subplots when using group by field", "type": "array", "minItems": 1, "items": { "description": "A single value of the group by field present in measurements", "type": ["string", "number", "boolean"] } } } } }, "filters": { "description": "The available filter options for measurements. Order of the filter options determines the order they are shown in the filter dropdown. Optional -- if not provided, then all fields will be available as filters.", "type": "array", "minItems": 1, "items": { "description": "The property name of the filter field within the measurement object", "type": "string" } }, "x_axis_label": { "description": "The short label to display for the x-axis that describes the `value` of the measurements in a collection", "type": "string" }, "thresholds": { "description": "Numeric measurement thresholds to be displayed as solid grey lines across subplots. Optional -- if not provided, no threshold will be displayed.", "type": "array", "minItems": 1, "items": { "description": "A numeric measurement threshold value.", "type": "number" } }, "threshold": { "deprecated": true, "description": "DEPRECATED - A numeric measurement threshold to be displayed as a single grey line shared across subplots. Will be ignored if 'thresholds' is provided.", "type": "number" }, "display_defaults": { "description": "Default display options of the collection", "type": "object", "additionalProperties": false, "minProperty": 1, "properties": { "group_by": { "description": "Default group by field name that must be included as a group by option in the groupings array. Optional -- if not provided, first group by option will be used", "type": "string" }, "measurements_display": { "description": "Dictates how the measurements are displayed, either as the raw data points or as the means of values grouped by the tree color-by attribute", "type": "string", "enum": ["raw", "mean"] }, "show_overall_mean": { "description": "Should the overall mean per group be displayed by default?", "type": "boolean" }, "show_threshold": { "description": "Should the threshold line be displayed by default? Ignored if no threshold has been provided for collection", "type": "boolean" } } }, "measurements": { "description": "All measurements for a single collection", "type": "array", "minItems": 1, "items": { "description": "A single measurement for a sample and it's associated metadata. At least one of the metadata properties should be a group by option", "type": "object", "required": ["strain", "value"], "minProperties": 3, "properties": { "strain": { "description": "The name of the sample that matches the name of the sample within the tree", "type": "string" }, "value": { "description": "The numeric value of the measurement", "type": "number" } }, "additionalProperties": { "description": "Metadata associated with the measurement. Only metadata properties included in the groupings config will be included in the group by dropdown, but all metadata properties will be available as a filter", "type": ["string", "number", "boolean"] } } } } } } } } augur-24.2.2/augur/data/schema-tip-frequencies.json000066400000000000000000000032701456376326500222370ustar00rootroot00000000000000 { "$schema": "http://json-schema.org/draft-06/schema#", "$id": "https://nextstrain.org/schemas/dataset/tip-frequencies", "title": "Nextstrain tip-frequencies sidecar for datasets", "description": "Typically produced by Augur (with `augur frequencies --method kde --tree …`) and consumed by Auspice. Note that the full range of output forms from `augur frequencies` is broader than this, see .", "$comment": "For historical context (some, not complete) on the development of this format, see and .", "type": "object", "required": ["pivots"], "properties": { "pivots": { "description": "Pivot dates as floating point numbers (YYYY.nnnnnn)", "type": "array", "items": {"type": "number"}, "minItems": 1, "uniqueItems": true }, "projection_pivot": { "description": "Pivot at which estimates are projected into the future. This property is understood by Auspice but only produced by custom generators; it is not produced by `augur frequencies`.", "type": "number" }, "generated_by": { "description": "Information about the software which produced the file", "type": "object", "properties": { "program": {"type": "string"}, "version": {"type": "string"} } } }, "additionalProperties": { "description": "Estimated frequencies for tip (or node) identified by this key", "type": "object", "properties": { "frequencies": { "type": "array", "items": {"type": "number"} } }, "additionalProperties": false } } augur-24.2.2/augur/dates/000077500000000000000000000000001456376326500151705ustar00rootroot00000000000000augur-24.2.2/augur/dates/__init__.py000066400000000000000000000120571456376326500173060ustar00rootroot00000000000000import argparse import datetime from textwrap import dedent import isodate import pandas as pd import re import treetime.utils from augur.errors import AugurError from .errors import InvalidDate from .ambiguous_date import AmbiguousDate SUPPORTED_DATE_HELP_TEXT = dedent("""\ 1. an Augur-style numeric date with the year as the integer part (e.g. 2020.42) or 2. a date in ISO 8601 date format (i.e. YYYY-MM-DD) (e.g. '2020-06-04') or 3. a backwards-looking relative date in ISO 8601 duration format with optional P prefix (e.g. '1W', 'P1W') """) def numeric_date(date): """ Converts the given *date* string to a :py:class:`float`. *date* may be given as: 1. A string or float (number) with year as the integer part 2. A string in the YYYY-MM-DD (ISO 8601) syntax 3. A string representing a relative date (duration before datetime.date.today()) Examples -------- >>> numeric_date("2020.42") 2020.42 >>> numeric_date("2020-06-04") 2020.42486... >>> import datetime, isodate, treetime >>> numeric_date("1W") == treetime.utils.numeric_date(datetime.date.today() - isodate.parse_duration("P1W")) True """ # date is a datetime.date if isinstance(date, datetime.date): return treetime.utils.numeric_date(date) # date is numeric try: return float(date) except ValueError: pass # date is in YYYY-MM-DD form try: return treetime.utils.numeric_date(datetime.date(*map(int, date.split("-", 2)))) except ValueError: pass # date is a duration treated as a backwards-looking relative date try: # make a copy of date for this block duration_str = str(date) if duration_str.startswith('P'): duration_str = duration_str else: duration_str = 'P'+duration_str return treetime.utils.numeric_date(datetime.date.today() - isodate.parse_duration(duration_str)) except (ValueError, isodate.ISO8601Error): pass raise InvalidDate(date, f"""Ensure it is in one of the supported formats:\n{SUPPORTED_DATE_HELP_TEXT}""") def numeric_date_type(date): """Wraps numeric_date() for argparse usage. This raises an ArgumentTypeError from InvalidDateFormat exceptions, otherwise the custom exception message won't be shown in console output due to: https://github.com/python/cpython/blob/5c4d1f6e0e192653560ae2941a6677fbf4fbd1f2/Lib/argparse.py#L2503-L2513 """ try: return numeric_date(date) except InvalidDate as error: raise argparse.ArgumentTypeError(str(error)) from error def is_date_ambiguous(date, ambiguous_by): """ Returns whether a given date string in the format of YYYY-MM-DD is ambiguous by a given part of the date (e.g., day, month, year, or any parts). Parameters ---------- date : str Date string in the format of YYYY-MM-DD ambiguous_by : str Field of the date string to test for ambiguity ("day", "month", "year", "any") """ date_components = date.split('-', 2) if len(date_components) == 3: year, month, day = date_components elif len(date_components) == 2: year, month = date_components day = "XX" else: year = date_components[0] if date_components[0] else 'X' month = "XX" day = "XX" # Determine ambiguity hierarchically such that, for example, an ambiguous # month implicates an ambiguous day even when day information is available. return any(( "X" in year, "X" in month and ambiguous_by in ("any", "month", "day"), "X" in day and ambiguous_by in ("any", "day") )) def get_numerical_date_from_value(value, fmt=None, min_max_year=None): value = str(value) if re.match(r'^-*\d+\.\d+$', value): # numeric date which can be negative return float(value) if value.isnumeric(): # year-only date is ambiguous value = fmt.replace('%Y', value).replace('%m', 'XX').replace('%d', 'XX') if 'XX' in value: try: ambig_date = AmbiguousDate(value, fmt=fmt).range(min_max_year=min_max_year) except InvalidDate as error: raise AugurError(str(error)) from error return [treetime.utils.numeric_date(d) for d in ambig_date] try: return treetime.utils.numeric_date(datetime.datetime.strptime(value, fmt)) except: return None def get_numerical_dates(metadata:pd.DataFrame, name_col = None, date_col='date', fmt=None, min_max_year=None): if not isinstance(metadata, pd.DataFrame): raise AugurError("Metadata should be a pandas.DataFrame.") if fmt: strains = metadata.index.values dates = metadata[date_col].apply( lambda date: get_numerical_date_from_value( date, fmt, min_max_year ) ).values else: strains = metadata.index.values dates = metadata[date_col].astype(float) return dict(zip(strains, dates)) def get_iso_year_week(year, month, day): return datetime.date(year, month, day).isocalendar()[:2] augur-24.2.2/augur/dates/ambiguous_date.py000066400000000000000000000147301456376326500205370ustar00rootroot00000000000000import calendar import datetime import functools import re from .errors import InvalidDate, InvalidYearBounds def tuple_to_date(year, month, day): month = min(month, 12) day = min(day, max_day_for_year_month(year, month)) return datetime.date(year=year, month=month, day=day) def max_day_for_year_month(year, month): return calendar.monthrange(year, month)[1] def resolve_uncertain_int(uncertain_string, min_or_max): """ Takes a string representation of an integer with uncertain places occupied by the character `X`. Returns the minimum or maximum possible integer. """ if min_or_max == "min": result = int(uncertain_string.replace("X", "0")) elif min_or_max == "max": result = int(uncertain_string.replace("X", "9")) else: raise "Tried to resolve an uncertain integer to something other than `min` or `max`." if result == 0: # A date component cannot be 0. Well, year can, but... result = 1 return result # This was originally from treetime.utils.ambiguous_date_to_date_range. class AmbiguousDate: """Transforms a date string with uncertainty into the range of possible dates.""" def __init__(self, uncertain_date, fmt="%Y-%m-%d"): self.uncertain_date = uncertain_date self.fmt = fmt self.assert_only_less_significant_uncertainty() def range(self, min_max_year=None): """Return the range of possible dates defined by the ambiguous date. Impose an upper limit of today's date. """ min_date = tuple_to_date( resolve_uncertain_int(self.uncertain_date_components["Y"], "min"), resolve_uncertain_int(self.uncertain_date_components["m"], "min"), resolve_uncertain_int(self.uncertain_date_components["d"], "min"), ) max_date = tuple_to_date( resolve_uncertain_int(self.uncertain_date_components["Y"], "max"), resolve_uncertain_int(self.uncertain_date_components["m"], "max"), resolve_uncertain_int(self.uncertain_date_components["d"], "max"), ) # Limit dates with ambiguous years to the given bounds. if "X" in self.uncertain_date_components["Y"] and min_max_year: lower_bound, upper_bound = get_bounds(min_max_year) if lower_bound: # lower_bound should always be truth-y, but add indentation here for readability. if max_date < lower_bound: raise InvalidDate(self.uncertain_date, f"Not possible for date to fall within bounds [{lower_bound}, {upper_bound}]") if min_date < lower_bound: min_date = lower_bound if upper_bound: if upper_bound < min_date: raise InvalidDate(self.uncertain_date, f"Not possible for date to fall within bounds [{lower_bound}, {upper_bound}]") if max_date > upper_bound: max_date = upper_bound # Limit the min and max dates to be no later than today's date. min_date = min(min_date, datetime.date.today()) max_date = min(max_date, datetime.date.today()) return (min_date, max_date) @property @functools.lru_cache() def uncertain_date_components(self): matches = re.search(self.regex, self.uncertain_date) if matches is None: raise InvalidDate(self.uncertain_date, f"Date does not match format `{self.fmt}`." ) return dict(zip(self.fmt_components, matches.groups())) @property @functools.lru_cache() def fmt_components(self): # The `re` module doesn't capture repeated groups, so we'll do it without regexes return [component[0] for component in self.fmt.split("%") if len(component) > 0] @property def regex(self): """ Returns regex defined by the format string. Currently only supports %Y, %m, and %d. """ return re.compile( "^" + self.fmt.replace("%Y", "(....)") .replace("%m", "(..?)") .replace("%d", "(..?)") + "$" ) def assert_only_less_significant_uncertainty(self): """ Raise an exception if a constrained digit appears in a less-significant place than an uncertain digit. Assuming %Y-%m-%d, these patterns are valid: 2000-01-01 2000-01-XX 2000-XX-XX but this is invalid, because month is uncertain but day is constrained: 2000-XX-01 These invalid cases are assumed to be unintended use of the tool. """ if "X" in self.uncertain_date_components["Y"]: if ( self.uncertain_date_components["m"] != "XX" or self.uncertain_date_components["d"] != "XX" ): raise InvalidDate(self.uncertain_date, "Year contains uncertainty, so month and day must also be uncertain." ) elif "X" in self.uncertain_date_components["m"]: if self.uncertain_date_components["d"] != "XX": raise InvalidDate(self.uncertain_date, "Month contains uncertainty, so day must also be uncertain." ) def get_bounds(min_max_year): """Get exact date bounds based on given years.""" # This must be an iterable with at least one value. assert len(min_max_year) > 0 if len(min_max_year) > 2: raise InvalidYearBounds(f"The year bounds {min_max_year!r} must have only one (lower) or two (lower, upper) bounds.") lower_year = int(min_max_year[0]) if len(min_max_year) == 2: upper_year = int(min_max_year[1]) else: upper_year = None # Ensure years are properly ordered. if lower_year and upper_year and lower_year > upper_year: lower_year, upper_year = upper_year, lower_year try: lower_bound = datetime.date(lower_year, 1, 1) except ValueError as error: if str(error).startswith("year"): raise InvalidYearBounds(f"{lower_year} is not a valid year.") from error else: raise if upper_year: try: upper_bound = datetime.date(upper_year, 12, 31) except ValueError as error: if str(error).startswith("year"): raise InvalidYearBounds(f"{upper_year} is not a valid year.") from error else: raise else: upper_bound = None return (lower_bound, upper_bound) augur-24.2.2/augur/dates/errors.py000066400000000000000000000010461456376326500170570ustar00rootroot00000000000000class InvalidDate(Exception): """Custom exception class to handle dates in unsupported formats.""" def __init__(self, date, message): """Initialize the error with the culprit date string and a meaningful message.""" self.date = date self.message = message def __str__(self): """Return a human-readable summary of the error.""" return f"Invalid date {self.date!r}: {self.message}" class InvalidYearBounds(Exception): """Custom exception class to handle year bounds in unsupported formats.""" augur-24.2.2/augur/distance.py000066400000000000000000000762561456376326500162540ustar00rootroot00000000000000"""Calculate the distance between sequences across entire genes or at a predefined subset of sites. Distance calculations require selection of a comparison method (to determine which sequences to compare) and a distance map (to determine the weight of a mismatch between any two sequences). **Comparison methods** Comparison methods include: #. root: the root and all nodes in the tree (the previous default for all distances) #. ancestor: each tip from a current season and its immediate ancestor (optionally, from a previous season) #. pairwise: all tips pairwise (optionally, all tips from a current season against all tips in previous seasons) Ancestor and pairwise comparisons can be calculated with or without information about the current season. When no dates are provided, the ancestor comparison calculates the distance between each tip and its immediate ancestor in the given tree. Similarly, the pairwise comparison calculates the distance between all pairs of tips in the tree. When the user provides a "latest date", all tips sampled after that date belong to the current season and all tips sampled on that date or prior belong to previous seasons. When this information is available, the ancestor comparison calculates the distance between each tip in the current season and its last ancestor from a previous season. The pairwise comparison only calculates the distances between tips in the current season and those from previous seasons. When the user also provides an "earliest date", pairwise comparisons exclude tips sampled from previous seasons prior to the given date. These two date parameters allow users to specify a fixed time interval for pairwise calculations, limiting the computationally complexity of the comparisons. For all distance calculations, a consecutive series of gap characters (`-`) counts as a single difference between any pair of sequences. This behavior reflects the assumption that there was an underlying biological process that produced the insertion or deletion as a single event as opposed to multiple independent insertion/deletion events. **Distance maps** Distance maps are defined in JSON format with two required top-level keys. The `default` key specifies the numeric (floating point) value to assign to all mismatches by default. The `map` key specifies a dictionary of weights to use for distance calculations. These weights are indexed hierarchically by gene name and one-based gene coordinate and are assigned in either a sequence-independent or sequence-dependent manner. The simplest possible distance map calculates Hamming distance between sequences without any site-specific weights, as shown below: .. code-block:: json { "name": "Hamming distance", "default": 1, "map": {} } To ignore specific characters such as gaps or ambiguous nucleotides from the distance calculation, define a top-level `ignored_characters` key with a list of characters to ignore. .. code-block:: json { "name": "Hamming distance", "default": 1, "ignored_characters": ["-", "N"], "map": {} } By default, distances are floating point values whose precision can be controlled with the `precision` key that defines the number of decimal places to retain for each distance. The following example shows how to specify a precision of two decimal places in the final output: .. code-block:: json { "name": "Hamming distance", "default": 1, "map": {}, "precision": 2 } Distances can be reported as integer values by specifying an `output_type` as `integer` or `int` as follows: .. code-block:: json { "name": "Hamming distance", "default": 1, "map": {}, "output_type": "integer" } Sequence-independent distances are defined by gene and position using a numeric value of the same type as the default value (integer or float). The following example is a distance map for antigenic amino acid substitutions near influenza A/H3N2 HA's receptor binding sites. This map calculates the Hamming distance between amino acid sequences only at seven positions in the HA1 gene: .. code-block:: json { "name": "Koel epitope sites", "default": 0, "map": { "HA1": { "145": 1, "155": 1, "156": 1, "158": 1, "159": 1, "189": 1, "193": 1 } } } Sequence-dependent distances are defined by gene, position, and sequence pairs where the `from` sequence in each pair is interpreted as the ancestral state and the `to` sequence as the derived state. The following example is a distance map that assigns asymmetric weights to specific amino acid substitutions at a specific position in the influenza gene HA1: .. code-block:: json { "default": 0.0, "map": { "HA1": { "112": [ { "from": "V", "to": "I", "weight": 1.192 }, { "from": "I", "to": "V", "weight": 0.002 } ] } } } The distance command produces a JSON output file in standard "node data" format that can be passed to `augur export`. In addition to the standard `nodes` field, the JSON includes a `params` field that describes the mapping of attribute names to requested comparisons and distance maps and any date parameters specified by the user. The following example JSON shows a sample output when the distance command is run with multiple comparisons and distance maps: .. code-block:: json { "params": { "attributes": ["ep", "ne", "ne_star", "ep_pairwise"], "compare_to": ["root", "root", "ancestor", "pairwise"], "map_name": [ "wolf_epitope", "wolf_nonepitope", "wolf_nonepitope", "wolf_epitope" ], "latest_date": "2009-10-01" }, "nodes": { "A/Afghanistan/AF1171/2008": { "ep": 7, "ne": 6, "ne_star": 1, "ep_pairwise": { "A/Aichi/78/2007": 1, "A/Argentina/3509/2006": 2 } } } } """ import Bio import Bio.Phylo from collections import defaultdict import copy from itertools import chain import json import pandas as pd import sys from .frequency_estimators import timestamp_to_float from .io.file import open_file from .reconstruct_sequences import load_alignments from .utils import annotate_parents_for_tree, first_line, read_node_data, write_json def read_distance_map(map_file): """Read a distance map JSON into a dictionary and assert that the JSON follows the correct format. Coordinates should be one-based in the JSON and are converted to zero-based coordinates on load. Parameters ---------- map_file : str name of a JSON file containing a valid distance map Returns ------- dict : Python representation of the distance map JSON Examples -------- >>> sorted(read_distance_map("tests/data/distance_map_weight_per_site.json").items()) [('default', 0), ('map', {'HA1': {144: 1}})] >>> sorted(read_distance_map("tests/data/distance_map_weight_per_site_and_sequence.json").items()) [('default', 0.0), ('map', {'SigPep': {0: {('W', 'P'): -8.3}}})] """ # Load the JSON. with open_file(map_file, "r") as fh: json_distance_map = json.load(fh) # Confirm that all required fields are present. assert "default" in json_distance_map, "the 'default' field is required in the distance map JSON" assert "map" in json_distance_map, "the 'map' field is required in the distance map JSON" # Reconstruct the distance map with zero-based integer coordinates and # dictionaries for sequence-specific weights. distance_map = copy.deepcopy(json_distance_map) distance_map["map"] = {} for gene, site_weights in json_distance_map["map"].items(): distance_map["map"][gene] = {} for site, weights in site_weights.items(): # Convert sequence-specific weights from the JSON-compatible list of # dictionaries to a dictionary of sequence-pair-to-weight mappings. try: weights = {(weight["from"], weight["to"]): weight["weight"] for weight in weights} except TypeError: # If weights are not iterable, keep them as site-specific # values. pass # Convert each one-based site string to a zero-based integer. distance_map["map"][gene][int(site) - 1] = weights # Return the distance map. return distance_map def get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map, aggregate_function=max): """Calculate distance between the two given nodes using the given distance map. In cases where the distance map between sequences is asymmetric, the first node is interpreted as the "ancestral" sequence and the second node is interpreted as the "derived" sequence. Parameters ---------- node_a_sequences, node_b_sequences : dict sequences by gene name for two nodes (samples) in a tree distance_map : dict definition of site-specific and, optionally, sequence-specific distances per gene Returns ------- float : distance between node sequences based on the given map Examples -------- >>> node_a_sequences = {"gene": "ACTG"} >>> node_b_sequences = {"gene": "ACGG"} >>> distance_map = {"default": 0, "map": {}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 0.0 >>> distance_map = {"default": 1, "map": {}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 1.0 >>> distance_map = {"default": 0.0, "map": {"gene": {3: 1.0}}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 0.0 >>> distance_map = {"default": 0.0, "map": {"gene": {2: 3.14159, 3: 1.0}}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 3.14159 >>> distance_map = {"default": 0.0, "precision": 2, "map": {"gene": {2: 3.14159, 3: 1.0}}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 3.14 >>> distance_map = {"default": 0.0, "output_type": "integer", "map": {"gene": {2: 3.14159, 3: 1.0}}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 3 >>> distance_map = {"default": 0.0, "output_type": "int", "map": {"gene": {2: 3.14159, 3: 1.0}}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 3 >>> distance_map = {"default": 0.0, "output_type": "unsupported", "map": {"gene": {2: 3.14159, 3: 1.0}}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) Traceback (most recent call last): ... ValueError: Unsupported output type of 'unsupported' provided in the distance map For site- and sequence-specific maps, the order of the input sequences matters; the first sequence is treated as the ancestral sequence while the second is treated as the derived. >>> distance_map = {"default": 0.0, "map": {"gene": {2: {('T', 'G'): 0.5}}}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 0.5 >>> distance_map = {"default": 0.0, "map": {"gene": {2: {('T', 'G'): 0.5}}}} >>> get_distance_between_nodes(node_b_sequences, node_a_sequences, distance_map) 0.0 Treat a single indel as one event. >>> node_a_sequences = {"gene": "ACTG"} >>> node_b_sequences = {"gene": "A--G"} >>> distance_map = {"default": 1, "map": {}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 1.0 Use the maximum weight of all sites affected by an indel with a site-specific distance map. >>> distance_map = {"default": 0, "map": {"gene": {1: 1, 2: 2}}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 2.0 Use the maximum weight of all mutations at all sites affected by an indel with a mutation-specific distance map. >>> distance_map = { ... "default": 0, ... "map": { ... "gene": { ... 1: { ... ('C', 'G'): 1, ... ('C', 'A'): 2 ... }, ... 2: { ... ('T', 'G'): 3, ... ('T', 'A'): 2 ... } ... } ... } ... } >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 3.0 Use the maximum weight of gaps at all sites affected by an indel with a mutation-specific distance map. >>> distance_map = { ... "default": 0, ... "map": { ... "gene": { ... 1: { ... ('C', '-'): 1, ... ('C', 'A'): 2 ... }, ... 2: { ... ('T', 'G'): 3, ... ('T', '-'): 2 ... } ... } ... } ... } >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 2.0 If the default value is greater than any of the site-specific mismatches and the specific mismatch does not have a weighted defined, use the default weight. >>> distance_map = { ... "default": 4, ... "map": { ... "gene": { ... 1: { ... ('C', 'G'): 1, ... ('C', 'A'): 2 ... }, ... 2: { ... ('T', 'G'): 3, ... ('T', 'A'): 2 ... } ... } ... } ... } >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 4.0 Count mismatches adjacent to indel events. >>> node_a_sequences = {"gene": "ACTGTA"} >>> node_b_sequences = {"gene": "A--CCA"} >>> distance_map = {"default": 1, "map": {}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 3.0 Ignore specific characters defined in the distance map. >>> node_a_sequences = {"gene": "ACTGG"} >>> node_b_sequences = {"gene": "A--GN"} >>> distance_map = {"default": 1, "ignored_characters":["-"], "map": {}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 1.0 >>> distance_map = {"default": 1, "ignored_characters":["-", "N"], "map": {}} >>> get_distance_between_nodes(node_a_sequences, node_b_sequences, distance_map) 0.0 """ distance = 0.0 ignored_characters = distance_map.get("ignored_characters", []) output_type = distance_map.get("output_type", "float") precision = distance_map.get("precision") for gene in node_a_sequences: gene_length = len(node_a_sequences[gene]) # In a first pass, find all mismatches between the given sequences. Use # this pass to identify all sites in insertion/deletion (indel) events, # so we can calculate an aggregate weight per event. Track each event by # its start site. mismatches_by_site = defaultdict(set) in_gap = False for site in range(gene_length): if (node_a_sequences[gene][site] != node_b_sequences[gene][site] and node_a_sequences[gene][site] not in ignored_characters and node_b_sequences[gene][site] not in ignored_characters): if node_a_sequences[gene][site] == "-" or node_b_sequences[gene][site] == "-": if not in_gap: gap_start = site in_gap = True mismatches_by_site[gap_start].add(site) else: in_gap = False mismatches_by_site[site].add(site) else: in_gap = False # Sum distances across mismatched sites, aggregating indel events by a # summary function (e.g., max, mean, etc.). for sites in mismatches_by_site.values(): mismatch_distances = [] for site in sites: if gene in distance_map["map"] and site in distance_map["map"][gene]: # Distances can be provided as either site- and # sequence-specific dictionaries of sequence pairs to # weights or as site-specific weights. Check for # dictionaries first. if isinstance(distance_map["map"][gene][site], dict): seq_ancestral = node_a_sequences[gene][site] seq_derived = node_b_sequences[gene][site] # Check first for a user-defined weight for the # mismatched bases. This supports mismatch weights # between specific characters including gaps. if (seq_ancestral, seq_derived) in distance_map["map"][gene][site]: mismatch_distances.append( distance_map["map"][gene][site][(seq_ancestral, seq_derived)] ) # Next, check whether the mismatch is a gap. We want to # take the aggregate of all weights at this site. elif seq_ancestral == "-" or seq_derived == "-": mismatch_distances.append( aggregate_function( chain( (distance_map["default"],), distance_map["map"][gene][site].values() ) ) ) # Finally, use the default weight, if no # sequence-specific weights are defined. else: mismatch_distances.append(distance_map["default"]) else: mismatch_distances.append(distance_map["map"][gene][site]) else: mismatch_distances.append(distance_map["default"]) # Aggregate the distances for all sites in the current mismatch. distance += aggregate_function(mismatch_distances) if output_type in ("integer", "int"): return int(distance) elif output_type != "float": raise ValueError(f"Unsupported output type of '{output_type}' provided in the distance map") if precision is not None: distance = round(distance, precision) return distance def get_distances_to_root(tree, sequences_by_node_and_gene, distance_map): """Calculate distances between all samples in the given sequences and the node of the given tree using the given distance map. Parameters ---------- tree : Bio.Phylo.BaseTree.Tree a rooted tree whose node names match the given dictionary of sequences by node and gene sequences_by_node_and_gene : dict nucleotide or amino acid sequences by node name and gene distance_map : dict site-specific and, optionally, sequence-specific distances between two sequences Returns ------- dict : distances calculated between the root sequence and each sample in the tree and indexed by node name """ distances_by_node = {} # Find the root node's sequences. root_node_sequences = sequences_by_node_and_gene[tree.root.name] # Calculate distance between root and all other nodes. for node_name, node_sequences in sequences_by_node_and_gene.items(): distances_by_node[node_name] = get_distance_between_nodes( root_node_sequences, node_sequences, distance_map ) return distances_by_node def get_distances_to_last_ancestor(tree, sequences_by_node_and_gene, distance_map, latest_date): """Calculate distances between each sample in the given sequences and its last ancestor in a previous season using the given distance map. Parameters ---------- tree : Bio.Phylo.BaseTree.Tree a rooted tree whose node names match the given dictionary of sequences by node and gene sequences_by_node_and_gene : dict nucleotide or amino acid sequences by node name and gene distance_map : dict site-specific and, optionally, sequence-specific distances between two sequences latest_date : pandas.Timestamp latest date to consider a node as a potential ancestor of a given sample; used to define a previous season relative to the most recent samples in the given tree. Returns ------- dict : distances calculated between each sample in the tree and its last ancestor sequence with distances indexed by node name """ if latest_date is not None: latest_date = timestamp_to_float(latest_date) distances_by_node = {} # Calculate distance between each tip and its closest ancestor in the last # season as defined by the given latest date threshold. for node in tree.find_clades(terminal=True): # If the given latest date is not None, skip nodes that were sampled # prior to this date. if latest_date is not None and node.attr["num_date"] < latest_date: continue # Find the closest ancestor of this node that was also sampled prior to # the given latest date. Stop searching once we reach the root. If the # latest date requested is None, the immediate parent of each node will # be used. parent = node.parent while parent != tree.root and latest_date is not None and parent.attr["num_date"] > latest_date: parent = parent.parent # Calculate distance between current node and its ancestor. distances_by_node[node.name] = get_distance_between_nodes( sequences_by_node_and_gene[parent.name], sequences_by_node_and_gene[node.name], distance_map ) return distances_by_node def get_distances_to_all_pairs(tree, sequences_by_node_and_gene, distance_map, earliest_date=None, latest_date=None): """Calculate distances between each sample in the given sequences and all other samples in previous seasons using the given distance map. Parameters ---------- tree : Bio.Phylo.BaseTree.Tree a rooted tree whose node names match the given dictionary of sequences by node and gene sequences_by_node_and_gene : dict nucleotide or amino acid sequences by node name and gene distance_map : dict site-specific and, optionally, sequence-specific distances between two sequences earliest_date, latest_date : pandas.Timestamp earliest or latest date to consider a node for comparison to a given sample; used to define a range of previous seasons relative to the most recent samples in the given tree. Dates are open intervals (inclusive) for interval of previous seasons. The latest date is a closed lower bound on the interval of the current season. Returns ------- dict : distances calculated between each sample in the tree and all samples from previous samples with distances indexed by primary sample name and then past sample name """ if earliest_date is not None: earliest_date = timestamp_to_float(earliest_date) if latest_date is not None: latest_date = timestamp_to_float(latest_date) distances_by_node = {} # Calculate distance between each tip and all tips in previous seasons as # defined by the given latest date threshold. for node in tree.find_clades(terminal=True): # Skip nodes that were sampled on or prior to this date. if latest_date is not None and node.attr["num_date"] < latest_date: continue # Distances between this node and other nodes are indexed by the other # node name. distances_by_node[node.name] = {} # Find all nodes that were sampled prior to the given latest date. for past_node in tree.find_clades(terminal=True): # Calculate distance between current node and the past node. Allow # comparison between any two nodes if an earliest or latest date is # not given. if ((earliest_date is None or past_node.attr["num_date"] >= earliest_date) and (latest_date is None or past_node.attr["num_date"] <= latest_date)): distances_by_node[node.name][past_node.name] = get_distance_between_nodes( sequences_by_node_and_gene[past_node.name], sequences_by_node_and_gene[node.name], distance_map ) return distances_by_node def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("distance", help=first_line(__doc__)) parser.add_argument("--tree", help="Newick tree", required=True) parser.add_argument("--alignment", nargs="+", help="sequence(s) to be used, supplied as FASTA files", required=True) parser.add_argument('--gene-names', nargs="+", type=str, help="names of the sequences in the alignment, same order assumed", required=True) parser.add_argument("--attribute-name", nargs="+", help="name to store distances associated with the given distance map; multiple attribute names are linked to corresponding positional comparison method and distance map arguments", required=True) parser.add_argument("--compare-to", nargs="+", choices=["root", "ancestor", "pairwise"], help="type of comparison between samples in the given tree including comparison of all nodes to the root (root), all tips to their last ancestor from a previous season (ancestor), or all tips from the current season to all tips in previous seasons (pairwise)", required=True) parser.add_argument("--map", nargs="+", help="JSON providing the distance map between sites and, optionally, sequences present at those sites; the distance map JSON minimally requires a 'default' field defining a default numeric distance and a 'map' field defining a dictionary of genes and one-based coordinates", required=True) parser.add_argument("--date-annotations", help="JSON of branch lengths and date annotations from augur refine for samples in the given tree; required for comparisons to earliest or latest date") parser.add_argument("--earliest-date", help="earliest date at which samples are considered to be from previous seasons (e.g., 2019-01-01). This date is only used in pairwise comparisons. If omitted, all samples prior to the latest date will be considered.") parser.add_argument("--latest-date", help="latest date at which samples are considered to be from previous seasons (e.g., 2019-01-01); samples from any date after this are considered part of the current season") parser.add_argument("--output", help="JSON file with calculated distances stored by node name and attribute name", required=True) return parser def run(args): # Load tree and annotate parents. tree = Bio.Phylo.read(args.tree, "newick") tree = annotate_parents_for_tree(tree) # Load sequences. alignments = load_alignments(args.alignment, args.gene_names) # Index sequences by node name and gene. sequences_by_node_and_gene = defaultdict(dict) for gene, alignment in alignments.items(): for record in alignment: sequences_by_node_and_gene[record.name][gene] = str(record.seq) # Prepare the earliest date to compare nodes against. if args.earliest_date is None: earliest_date = None else: earliest_date = pd.Timestamp(args.earliest_date) # Prepare the latest date to compare nodes against. if args.latest_date is None: latest_date = None else: latest_date = pd.Timestamp(args.latest_date) # Load date annotations if any date ranges have been requested. if earliest_date or latest_date: if args.date_annotations is None: print( "ERROR: date annotations JSON from augur refine (e.g., branch_lengths.json) is required", file=sys.stderr ) sys.exit(1) date_annotations = read_node_data(args.date_annotations) # Annotate tree with date annotations. for node in tree.find_clades(): node.attr = date_annotations["nodes"][node.name] node.attr["num_date"] = node.attr["numdate"] final_distances_by_node = {} distance_map_names = [] for compare_to, attribute, distance_map_file in zip(args.compare_to, args.attribute_name, args.map): # Load the given distance map. distance_map = read_distance_map(distance_map_file) distance_map_names.append(distance_map.get("name", distance_map_file)) # Use the distance map to calculate distances between all samples in the # given tree and the desired target(s). if compare_to == "root": # Calculate distance between the root and all samples. distances_by_node = get_distances_to_root( tree, sequences_by_node_and_gene, distance_map ) elif compare_to == "ancestor": # Calculate distance between the last ancestor for each sample in a # previous season. distances_by_node = get_distances_to_last_ancestor( tree, sequences_by_node_and_gene, distance_map, latest_date ) elif compare_to == "pairwise": # Calculate distance between each sample and all other samples in a # previous season. distances_by_node = get_distances_to_all_pairs( tree, sequences_by_node_and_gene, distance_map, earliest_date, latest_date ) else: # If the command line argument choices are defined properly above, # this block should never execute. print("ERROR: the comparison method '%s' is not supported" % compare_to, file=sys.stderr) sys.exit(1) # Map distances to the requested attribute name. # Convert data like: # { # "A/AbuDhabi/24/2017": 1 # } # to data like: # # { # "A/AbuDhabi/24/2017": { # "ep": 1 # } # } # for node_name, values in distances_by_node.items(): if node_name not in final_distances_by_node: final_distances_by_node[node_name] = {} final_distances_by_node[node_name][attribute] = values # Prepare params for export. params = { "attribute": args.attribute_name, "compare_to": args.compare_to, "map_name": distance_map_names, "earliest_date": args.earliest_date, "latest_date": args.latest_date } # Export distances to JSON. write_json({"params": params, "nodes": final_distances_by_node}, args.output) augur-24.2.2/augur/errors.py000066400000000000000000000000461456376326500157560ustar00rootroot00000000000000class AugurError(Exception): pass augur-24.2.2/augur/export.py000066400000000000000000000012271456376326500157650ustar00rootroot00000000000000""" Export JSON files suitable for visualization with auspice. """ from .argparse_ import add_command_subparsers from . import export_v1, export_v2 SUBCOMMANDS = [ export_v2, export_v1, ] def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("export", help=__doc__) # Add subparsers for subcommands metavar_msg ="Augur export now needs you to define the JSON version " + \ "you want, e.g. `augur export v2`." subparsers = parser.add_subparsers(title="JSON SCHEMA", metavar=metavar_msg) add_command_subparsers(subparsers, SUBCOMMANDS) return parser augur-24.2.2/augur/export_v1.py000066400000000000000000000407221456376326500163760ustar00rootroot00000000000000""" Export version 1 JSON schema (separate meta and tree JSONs) for visualization with Auspice """ import sys from textwrap import dedent import time import numpy as np from Bio import Phylo from argparse import SUPPRESS from collections import defaultdict from .errors import AugurError from .io.metadata import DEFAULT_DELIMITERS, InvalidDelimiter, read_metadata from .utils import read_node_data, write_json, read_config, read_lat_longs, read_colors def convert_tree_to_json_structure(node, metadata, div=0, strains=None): """ converts the Biopython tree structure to a dictionary that can be written to file as a json. This is called recursively. Creates the strain property & divergence on each node input node -- node for which top level dict is produced. div -- cumulative divergence (root = 0) returns tree in JSON structure list of strains """ node_struct = { 'attr': {"div": div}, 'strain': node.name, 'clade': node.clade } for attr in ['branch_length', 'tvalue', 'yvalue', 'xvalue']: try: node_struct[attr] = node.__getattribute__(attr) except AttributeError: pass if strains is None: strains = [node_struct["strain"]] else: strains.append(node_struct["strain"]) if node.clades: node_struct["children"] = [] for child in node.clades: if 'mutation_length' in metadata[child.name]: cdiv = div + metadata[child.name]['mutation_length'] elif 'branch_length' in metadata[child.name]: cdiv = div + metadata[child.name]['branch_length'] else: print("ERROR: Cannot find branch length information for %s"%(child.name)) node_struct["children"].append(convert_tree_to_json_structure(child, metadata, div=cdiv, strains=strains)[0]) return (node_struct, strains) def recursively_decorate_tree_json_v1_schema(node, node_metadata, decorations): """ This function is deprecated and is used to produce the v1-compatable JSON format For given decorations, add information from node_metadata to each node in the tree. * decorations must have property "key" which is the key used to insert into the node and the default key used to access node_metadata * if decorations has property "lookup_key", this is used to access node meta_data instead * if decorations has property "is_attr" (and it's value is True) then the result is inserted into node["attr"] returns Null """ try: metadata = node_metadata[node["strain"]] metadata["strain"] = node["strain"] except KeyError: raise Exception("ERROR: node %s is not found in the node metadata."%node.name) for data in decorations: val = None insert_key = data["key"] try: if "lookup_key" in data: val = metadata[data["lookup_key"]] else: val = metadata[insert_key] except KeyError: pass if val is not None: if "is_attr" in data and data["is_attr"]: node["attr"][insert_key] = val else: if insert_key == 'aa_muts': val = {k:v for k,v in val.items() if len(v) } node[insert_key] = val if "children" in node: for child in node["children"]: recursively_decorate_tree_json_v1_schema(child, node_metadata, decorations) def tree_layout(T): """ calculate tree layout. This function is deprecated, and only used for the v1 JSON format """ yval=T.count_terminals() clade = 0; for n in T.find_clades(order='postorder'): n.clade=clade; clade+=1; if n.is_terminal(): n.yvalue=yval yval-=1 else: child_yvalues = [c.yvalue for c in n] n.yvalue=0.5*(np.min(child_yvalues)+np.max(child_yvalues)) def process_colorings(jsn, color_mapping, nodes=None, node_metadata=None): if "color_options" not in jsn: print("WARNING: no color options were defined") return data = jsn["color_options"] for trait, options in data.items(): if "legendTitle" not in options: options["legendTitle"] = trait if "menuItem" not in options: options["menuItem"] = trait if "key" not in options: options["key"] = trait if nodes: values_in_tree = {node[trait] for node in nodes.values() if trait in node} else: values_in_tree = {data["traits"][trait]["value"] for name, data in node_metadata.items() if trait in data['traits']} if trait.lower() in color_mapping: # remember that the color maps (from the TSV) are in lower case, but this is not how they should be exported case_map = {str(val).lower(): val for val in values_in_tree} options["color_map"] = [(case_map[m[0]], m[1]) for m in color_mapping[trait.lower()] if m[0] in case_map] return data def process_geographic_info(jsn, lat_long_mapping, node_metadata=None, nodes=None): if "geo" not in jsn: return {} geo = defaultdict(dict) traits = jsn["geo"] for trait in traits: demes_in_tree = {node[trait] for node in nodes.values() if trait in node} for deme in demes_in_tree: try: geo[trait][deme] = lat_long_mapping[(trait.lower(),deme.lower())] except KeyError: print("Error. {}->{} did not have an associated lat/long value (matching performed in lower case)".format(trait, deme)) return geo def process_annotations(node_data): # `augur translate` adds "annotations" to node_data if "annotations" not in node_data: return None # starting with augur v6 the node data JSONs use GFF like syntax, i.e. # [one-origin, inclusive], strand: "+" / "-" # however v1 JSONs used [zero-origin, half-open), strand: "1" / "-1" annotations = {} for name, info in node_data["annotations"].items(): annotations[name] = { "start": info["start"]-1, "end": info["end"], "strand": -1 if info["strand"] == "-" else 1 } return annotations def process_panels(user_panels, meta_json): try: panels = meta_json["panels"] except KeyError: panels = ["tree", "map", "entropy"] if user_panels is not None and len(user_panels) != 0: panels = user_panels if "geo" in meta_json: geoTraits = meta_json["geo"].keys() else: geoTraits = [] if "annotations" in meta_json: annotations = meta_json["annotations"].keys() else: annotations = [] if "entropy" in panels and len(annotations) == 0: panels.remove("entropy") if "map" in panels and len(geoTraits) == 0: panels.remove("map") return panels def ensure_config_is_v1(config): """ Check the provided config file is intended for `augur export v1` (not v2, v3 etc) Side effects: may print a warning & exit """ if config.get("maintainers") or config.get("geo_resolutions") or config.get("display_defaults") or config.get("colorings"): print("ERROR. It appears that your provided config file is using a newer schema than required for `augur export v1`.") # TODO: print documentation URL when we have one available sys.exit(2) def construct_author_info_v1(metadata, tree, nodes): """ author info maps the "authors" property present on tree nodes to further information about the paper etc """ authorsInTree = set() for node in tree.find_clades(order='postorder'): if node.is_terminal and node.name in nodes and "authors" in nodes[node.name]: authorsInTree.add(nodes[node.name]["authors"]) author_info = defaultdict(lambda: {"n": 0}) no_authors = 0 for strain, data in metadata.iterrows(): if "authors" not in data: no_authors += 1 continue if data["authors"] not in authorsInTree: continue authors = data["authors"] author_info[authors]["n"] += 1 # add in extra attributes if they're present in the meta TSV (for this strain...) for attr in ["title", "journal", "paper_url"]: if attr in data: if attr in author_info[authors] and data[attr].strip() != author_info[authors][attr].strip(): print("Error - {} had contradictory {}(s): {} vs {}".format(authors, attr, data[attr], author_info[authors][attr])) author_info[authors][attr] = data[attr].strip() if no_authors: print("Warning - {} samples did not have author information.".format(no_authors)) return author_info def add_tsv_metadata_to_nodes(nodes, meta_tsv, meta_json, extra_fields=['authors', 'url', 'accession']): """ Only used for v1 schema compatability Add the relevent fields from meta_tsv to the nodes (both are dictionaries keyed off of strain names) * the relevent fields are found by scanning the meta json together with the extra_fields param """ if "color_options" in meta_json and isinstance(meta_json["color_options"], dict): fields = [x for x in meta_json["color_options"].keys() if x != "gt"] + extra_fields else: fields = list(extra_fields) if "geo" in meta_json: fields += meta_json["geo"] for strain, node in nodes.items(): if strain not in meta_tsv.index: continue for field in fields: # Allow fields to have value of 0! - but prevent from having value of "" (breaks auspice v1) if field not in node and field in meta_tsv.columns and (meta_tsv.at[strain, field] or meta_tsv.at[strain, field]==0): node[field] = meta_tsv.at[strain, field] def get_root_sequence(root_node, ref=None, translations=None): ''' create a json structure that contains the sequence of the root, both as nucleotide and as translations. This allows look-up of the sequence for all states, including those that are not variable. Parameters ---------- root_node : dict data associated with the node ref : str, optional filename of the root sequence translations : str, optional file name of translations Returns ------- dict dict of nucleotide sequence and translations ''' root_sequence = {} if ref and translations: from Bio import SeqIO refseq = SeqIO.read(ref, 'fasta') root_sequence['nuc']=str(refseq.seq) for gene in SeqIO.parse(translations, 'fasta'): root_sequence[gene.id] = str(gene.seq) else: root_sequence["nuc"] = root_node["sequence"] root_sequence.update(root_node["aa_sequences"]) return root_sequence def add_core_args(parser): core = parser.add_argument_group("REQUIRED") core.add_argument('--tree','-t', required=True, help="tree to perform trait reconstruction on") core.add_argument('--metadata', required=True, metavar="FILE", help="sequence metadata") core.add_argument('--metadata-delimiters', default=DEFAULT_DELIMITERS, nargs="+", help="delimiters to accept when reading a metadata file. Only one delimiter will be inferred.") core.add_argument('--node-data', required=True, nargs='+', action="extend", help="JSON files with meta data for each node") core.add_argument('--output-tree', help="JSON file name that is passed on to auspice (e.g., zika_tree.json).") core.add_argument('--output-meta', help="JSON file name that is passed on to auspice (e.g., zika_meta.json).") core.add_argument('--auspice-config', help="file with auspice configuration") return core def add_option_args(parser): options = parser.add_argument_group("OPTIONS") options.add_argument('--colors', metavar="FILE", help="Custom color definitions, one per line in the format `TRAIT_TYPE\\tTRAIT_VALUE\\tHEX_CODE`") options.add_argument('--lat-longs', help="file latitudes and longitudes, overrides built in mappings") options.add_argument('--tree-name', default=False, help="Tree name (needed for tangle tree functionality)") options.add_argument('--minify-json', action="store_true", help="export JSONs without indentation or line returns") options.add_argument('--output-sequence', help="JSON file name that is passed on to auspice (e.g., zika_seq.json).") options.add_argument('--reference', required=False, help="reference sequence for export to browser, only vcf") options.add_argument('--reference-translations', required=False, help="reference translations for export to browser, only vcf") return options def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("v1", help=__doc__) add_core_args(parser) add_option_args(parser) parser.add_argument("--v1", help=SUPPRESS, default=True) return parser def run(args): print(dedent("""\ DEPRECATION WARNING: augur export v1 is no longer maintained and will be removed in a future release. Read more on how to migrate to export v2: """),file=sys.stderr) T = Phylo.read(args.tree, 'newick') node_data = read_node_data(args.node_data) # args.node_data is an array of multiple files (or a single file) nodes = node_data["nodes"] # this is the per-node metadata produced by various augur modules if args.minify_json: json_indent = None else: json_indent = 2 # export reference sequence data including translations. This is either the # inferred sequence of the root, or the reference sequence with respect to # which mutations are made on the tree (including possible mutations leading # to the root of the tree -- typical case for vcf input data). if args.output_sequence: if T.root.name in nodes: root_sequence = get_root_sequence(nodes[T.root.name], ref=args.reference, translations=args.reference_translations) else: root_sequence = {} write_json(root_sequence, args.output_sequence, include_version=False) meta_json = read_config(args.auspice_config) ensure_config_is_v1(meta_json) try: meta_tsv = read_metadata( args.metadata, delimiters=args.metadata_delimiters) except InvalidDelimiter: raise AugurError( f"Could not determine the delimiter of {args.metadata!r}. " f"Valid delimiters are: {args.metadata_delimiters!r}. " "This can be changed with --metadata-delimiters." ) add_tsv_metadata_to_nodes(nodes, meta_tsv, meta_json) tree_layout(T) tree_json, _ = convert_tree_to_json_structure(T.root, nodes) # now the messy bit about what decorations (e.g. "country", "aa_muts") do we want to add to the tree? # see recursively_decorate_tree_json to understand the tree_decorations structure tree_decorations = [ {"key": "num_date", "lookup_key": "numdate", "is_attr": True}, {"key": "muts", "is_attr": False}, {"key": "aa_muts", "is_attr": False} ] traits_via_node_metadata = {k for node in nodes.values() for k in node.keys()} traits_via_node_metadata -= {'sequence', 'mutation_length', 'branch_length', 'numdate', 'mutations', 'muts', 'aa_muts', 'aa_sequences'} for trait in traits_via_node_metadata: tree_decorations.append({"key": trait, "is_attr": True}) recursively_decorate_tree_json_v1_schema(tree_json, nodes, decorations=tree_decorations) write_json(tree_json, args.output_tree, indent=json_indent, include_version=False) # Export the metadata JSON lat_long_mapping = read_lat_longs(args.lat_longs) try: color_mapping = read_colors(args.colors) except FileNotFoundError as e: print(f"ERROR: required file could not be read: {e}") sys.exit(2) meta_json["updated"] = time.strftime("%d %b %Y") meta_json["virus_count"] = len(list(T.get_terminals())) meta_json["author_info"] = construct_author_info_v1(meta_tsv, T, nodes) meta_json["color_options"] = process_colorings(meta_json, color_mapping, nodes=nodes) meta_json["geo"] = process_geographic_info(meta_json, lat_long_mapping, nodes=nodes) annotations = process_annotations(node_data) if annotations: meta_json["annotations"] = annotations meta_json["panels"] = process_panels(None, meta_json) write_json(meta_json, args.output_meta, indent=json_indent, include_version=False) return 0 augur-24.2.2/augur/export_v2.py000066400000000000000000001612431456376326500164010ustar00rootroot00000000000000""" Export version 2 JSON schema for visualization with Auspice """ import os from pathlib import Path import sys import time from collections import defaultdict, deque, OrderedDict import warnings import numbers import re from Bio import Phylo from .errors import AugurError from .io.file import open_file from .io.metadata import DEFAULT_DELIMITERS, DEFAULT_ID_COLUMNS, InvalidDelimiter, read_metadata from .types import ValidationMode from .utils import read_node_data, write_json, json_size, read_config, read_lat_longs, read_colors from .validate import export_v2 as validate_v2, auspice_config_v2 as validate_auspice_config_v2, ValidateError MINIFY_THRESHOLD_MB = 5 # Set up warnings & exceptions warn = warnings.warn deprecationWarningsEmitted = False def deprecated(message): warn(message, DeprecationWarning, stacklevel=2) global deprecationWarningsEmitted deprecationWarningsEmitted=True def warning(message): warn(message, UserWarning, stacklevel=2) def fatal(message): print("FATAL ERROR: {}".format(message)) sys.exit(2) def configure_warnings(): # we must only set these when someone runs `augur export v2` (i.e. run_v2() is called) # else they will apply to _all_ augur commands due to the way all commands are pulled # in by the augur runner (augur/__init__.py) def customformatwarning(message, category, filename, lineno, line=None): if category.__name__ == "UserWarning": return "WARNING: {}\n\n".format(message) if category.__name__ == "DeprecationWarning": return "DEPRECATED: {}\n\n".format(message) return "{}\n".format(message) warnings.formatwarning = customformatwarning warnings.simplefilter("default") # show DeprecationWarnings by default class InvalidOption(Exception): pass class CustomOrderedDict(OrderedDict): """ Similar to OrderedDict but will convert dictionaries (and dictionaries of dictionaries) into (nested) CustomOrderedDicts. Encountered lists of dicts will be converted to lists of CustomOrderedDict but we will not recursively explore nested lists. Tuples and other iterators are not explored. """ def __init__(self, *args): super().__init__(*args) for key in self: if isinstance(self[key], dict) and not isinstance(self[key], OrderedDict): self[key] = CustomOrderedDict(self[key]) elif isinstance(self[key], list): self[key] = [ (CustomOrderedDict(el) if (isinstance(el, dict) and not isinstance(el, OrderedDict)) else el) for el in self[key] ] def set_order(self, *order): """ changes the order of keys to match those specified in `order` as much as possible. Missing keys are ignored. Extra keys will come after those specified in `order`. """ for key in reversed(order): self.move_to_end_if_present(key, last=False) def move_to_end_if_present(self, key, **kwargs): try: self.move_to_end(key, **kwargs) except KeyError: pass def orderKeys(data): """ converts the data dict (where keys are inherently unordered) into an OrderedDict where keys are nicely ordered for human eyes to scan the data when written to JSON. The ordering (mostly) mirrors the schema. """ od = CustomOrderedDict(data) od.set_order("version", "meta", "tree") if "meta" in od: od["meta"].set_order("title", "updated", "build_url", "data_provenance", "maintainers") for coloring in od['meta'].get('colorings', []): coloring.set_order("key", "title", "type", "scale", "legend") def order_nodes(node): """recursive function to order nodes in a (sub)tree""" node.set_order("name", "node_attrs", "branch_attrs") # children often a _large_ object and it improves readability if this comes last in the node node.move_to_end_if_present("children") if "node_attrs" in node: node["node_attrs"].set_order("div", "num_date") for child in node.get("children", []): order_nodes(child) if isinstance(od.get("tree"), list): for subtree in od['tree']: order_nodes(subtree) elif isinstance(od.get("tree"), dict): order_nodes(od['tree']) return od def node_div(T, node_attrs): """ Scans the provided tree & metadata to see if divergence is defined, and if so returns a function which gets it from individual nodes. Divergence may be defined via a number of sources, and we pick them in the following order: * metadata.mutation_length (typically via `augur refine`) * metadata.branch_length (typically via `augur refine`) * Branch lengths encoded in the Newick tree Returns either: * function with arguments: (node, metadata_for_node) which returns the node divergence * None (indicates that divergence is not available for this dataset) """ if all(('mutation_length' in node_attrs[n.name] for n in T.root.find_clades())): return lambda node, metadata: metadata['mutation_length'] if all(('branch_length' in node_attrs[n.name] for n in T.root.find_clades())): return lambda node, metadata: metadata['branch_length'] if T.root.branch_length is not None: return lambda node, metadata: node.branch_length return None def convert_tree_to_json_structure(node, metadata, get_div, div=0): """ converts the Biopython tree structure to a dictionary that can be written to file as a json. This is called recursively. Parameters ---------- node : Bio.Phylo.Newick.Clade metadata : dict Per-node metadata, with keys matching `node.name` get_div : (None or function) Function returns divergence for this node. Arguments: (node, metadata_for_node) If None then divergence is not defined for this dataset and so 'div' is not set on returned nodes. div : int cumulative divergence leading to the current node (root = 0) Returns ------- dict: See schema-export-v2.json#/$defs/tree for full details. Node names are always set, and divergence is set if applicable """ node_struct = {'name': node.name, 'node_attrs': {}, 'branch_attrs': {}} if get_div is not None: # Store the (cumulative) observed divergence prior to this node node_struct["node_attrs"]["div"] = div if node.clades: node_struct["children"] = [] for child in node.clades: cdiv = div if get_div: cdiv += get_div(child, metadata[child.name]) node_struct["children"].append(convert_tree_to_json_structure(child, metadata, get_div, div=cdiv)) return node_struct def are_mutations_defined(branch_attrs): for branch in branch_attrs.values(): if branch.get("mutations"): return True return False def is_node_attr_defined(node_attrs, attr_name): for node, data in node_attrs.items(): if data.get(attr_name): return True return False def update_deprecated_names(name): # correct deprecated keys change = { "authors": "author", "numdate": "num_date" } return change.get(name, name) def get_values_across_nodes(node_attrs, key): vals = set() for data in node_attrs.values(): if is_valid(data.get(key)): vals.add(data.get(key)) return vals def is_valid(value): invalid = ["undefined", "unknown", "?", "nan", "na", "n/a", 'none', '', 'not known'] return str(value).strip('\"').strip("'").strip().lower() not in invalid def get_config_colorings_as_dict(config): # extract the colorings information from the config JSON, if provided # and return as a dict of `key` -> obj where `obj` is in v2-schema format config_colorings = {} if config.get("colorings"): config_colorings = {v.get("key"):v for v in config["colorings"]} elif config.get("color_options"): deprecated("[config file] 'color_options' has been replaced with 'colorings' & the structure has changed.") # parse v1-style colorings & convert to v2-style for key, info in config.get("color_options").items(): # note: if both legentTitle & menuItem are present then we use the latter. See https://github.com/nextstrain/auspice/issues/730 if "menuItem" in info: deprecated("[config file] coloring '{}': 'menuItem' has been replaced with 'title'. Using 'menuItem' as 'title'.".format(key)) info["title"] = info["menuItem"] del info["menuItem"] if "legendTitle" in info: if info["title"]: # this can only have been set via menuItem ^^^ deprecated("[config file] coloring '{}': 'legendTitle' has been replaced with 'title' & is unused since 'menuItem' is present.".format(key)) else: deprecated("[config file] coloring '{}': 'legendTitle' has been replaced with 'title'. Using 'legendTitle' as 'title'.".format(key)) info["title"] = info["legendTitle"] del info["legendTitle"] if "key" in info: del info["key"] if info.get("type") == "discrete": deprecated("[config file] coloring '{}': type 'discrete' is no longer valid. Please use either 'ordinal', 'categorical' or 'boolean'. " "This has been automatically changed to 'categorical'.".format(key)) info["type"] = "categorical" config_colorings[key] = info return config_colorings def set_colorings(data_json, config, command_line_colorings, metadata_names, node_data_colorings, provided_colors, node_attrs, branch_attrs): def _get_type(key, trait_values): # for some keys we know what the type must be known_types = { "clade_membership": "categorical", "gt": "categorical", "author": "categorical", "num_date": "continuous" } if key in known_types: return known_types[key] if config.get(key, {}).get("type"): t = config.get(key).get("type") allowedTypes = ["continuous", "temporal", "ordinal", "categorical", "boolean"] if t not in allowedTypes: warn("[config file] In trait {}, coloring type '{}' is not valid. Please choose from: '{}'. This trait has been excluded!".format(key, t, ", ".join(allowedTypes))) raise InvalidOption() return t # no type supplied => try to guess if all([all([str(x).lower() in ["false", "true", "1.0", "0.0", "1", "0", "yes", "no"] for x in trait_values])]): t = "boolean" elif all([ isinstance(n, float) if isinstance(n, float) else isinstance(n, int) for n in trait_values ]): t = "continuous" else: t = "categorical" #Don't warn if command-line - no way to specify #treat country and region differently if config: warn("[config file] Trait '{}' is missing type information. We've guessed '{}'.".format(key, t)) elif key != "country" and key != "region": print("Trait '{}' was guessed as being type '{}'. Use a 'config' file if you'd like to set this yourself.".format(key, t)) return t def _get_title(key): # preferentially get the title from the config if set (walrus operator would help here) config_title = config.get(key, {}).get("title") if config_title: return config_title # hardcoded fallbacks: if key == "clade_membership": return "Clade" if key == "gt": return "Genotype" if key == "author": return "Authors" if key == 'num_date': return 'Sampling date' # fallthrough return key def _add_color_scale(coloring): ## consider various sources to find any user-provided scale information key = coloring["key"] scale_type = coloring["type"] if scale_type == "continuous": ## continuous scale information can only come from an auspice config JSON if config.get(key, {}).get("scale"): # enforce numeric values (we can't use the schema for this) provided_scale = [s for s in config[key]['scale'] if isinstance(s[0], numbers.Number)] if len(provided_scale)<2: warn(f"The scale provided for {key} had fewer than 2 (valid numeric) entries. Skipping.") return coloring coloring["scale"] = provided_scale return coloring elif config.get(key, {}).get("scale"): # If the auspice config JSON (`config`) explicitly defines a scale for this coloring # then we use this instead of any colors provided via a TSV file (`provided_colors`) values_in_tree = get_values_across_nodes(node_attrs, key) scale = [] provided_values_unseen_in_tree = [] for info in config[key]['scale']: if info[0] in values_in_tree: scale.append(info) else: provided_values_unseen_in_tree.append(info[0]) if len(scale): coloring["scale"] = scale if len(provided_values_unseen_in_tree): warn(f"The configuration JSON specifies colors for \"{key}\" which aren't found in the tree:\n\t{', '.join(provided_values_unseen_in_tree)}.") return coloring warn(f"The configuration JSON specifies a color scale for {key} however none of the values in the tree are in this scale! Auspice will generate its own color scale for this trait.") elif key.lower() in provided_colors: # `provided_colors` typically originates from a colors.tsv file scale = [] trait_values = {str(val).lower(): val for val in get_values_across_nodes(node_attrs, key)} trait_values_unseen = {k for k in trait_values} for provided_key, provided_color in provided_colors[key.lower()]: if provided_key.lower() in trait_values: scale.append([trait_values[provided_key.lower()], provided_color]) trait_values_unseen.discard(provided_key.lower()) if len(scale): coloring["scale"] = scale if len(trait_values_unseen): warn(f"These values for trait {key} were not specified in the colors file you provided:\n\t{', '.join(trait_values_unseen)}.\n\tAuspice will create colors for them.") return coloring warn(f"You've supplied a colors file with information for {key} but none of the values found on the tree had associated colors. Auspice will generate its own color scale for this trait.") # Fallthrough (no scale information provided means that auspice will generate its own scale) return coloring def _add_legend(coloring): """ If there is a config-defined legend entry for this coloring, then add it to the coloring object under the key "legend" Enclosing scope variables used ------------------------------ config : object Parameters ---------- coloring : object Returns ------- object : returns the single input parameter, potentially modified in place """ key = coloring["key"] if config.get(key, {}).get("legend"): # The structure of the legend in the auspice config file is the same as the exported # auspice dataset JSON, and the schema validates this for us so we don't have to check here. # Note that if the data is inconsistent (e.g. overlapping bounds) then auspice will # discard them (and print a console warning) coloring['legend'] = config[key]['legend'] return coloring def _add_title_and_type(coloring): key = coloring["key"] trait_values = get_values_across_nodes(node_attrs, key) # e.g. list of countries, regions etc try: coloring["title"] = _get_title(key) coloring["type"] = _get_type(key, trait_values) except InvalidOption: return False # a warning message will have been printed before `InvalidOption` is raised return coloring def _add_coloring(colorings, key): # handle deprecations if key == "authors": deprecated("[colorings] The 'authors' key is now called 'author'") key = "author" # check if the key has already been added by another part of the color-creating logic if key not in {x['key'] for x in colorings}: colorings.append({"key": key}) def _is_valid(coloring): key = coloring["key"] trait_values = get_values_across_nodes(node_attrs, key) # e.g. list of countries, regions etc if key == "gt" and not are_mutations_defined(branch_attrs): warn("[colorings] You asked for mutations (\"gt\"), but none are defined on the tree. They cannot be used as a coloring.") return False if key != "gt" and not trait_values: warn(f"Requested color-by field {key!r} does not exist and will not be used as a coloring or exported.") return False return True def _get_colorings(): # which colorings are intended for this dataset? # returns an array of dicts, where the order determines the order in auspice's dropdowns # note that invalid options will be pruned out later # it is here that we deal with the interplay between node-data "traits", command line colorings & # config provided options auto_colorings = [name for name in node_data_colorings if node_data_prop_is_normal_trait(name) and name not in metadata_names] colorings = [] # If we have command line colorings, it seems we (a) ignore any provided in the config file # and (b) start with the node-data "traits". (Note that in a later function, the title and/or # type will be accessed from the config file if available) if command_line_colorings: # start with auto_colorings (already validated to be included) for x in auto_colorings: _add_coloring(colorings, x) # then add in command line colorings for x in command_line_colorings: _add_coloring(colorings, x) else: # if we have a config file, start with these (extra info, such as title&type, is added in later) if config: for x in config.keys(): _add_coloring(colorings, x) # then add in any auto-colorings already validated to include for x in auto_colorings: _add_coloring(colorings, x) explicitly_defined_colorings = [x["key"] for x in colorings] # add in genotype as a special case if (a) not already set and (b) the data supports it if "gt" not in explicitly_defined_colorings and are_mutations_defined(branch_attrs): colorings.insert(0,{'key':'gt'}) if "num_date" not in explicitly_defined_colorings and is_node_attr_defined(node_attrs, "num_date"): colorings.insert(0,{'key':'num_date'}) if "clade_membership" not in explicitly_defined_colorings and is_node_attr_defined(node_attrs, "clade_membership"): colorings.insert(0,{'key':'clade_membership'}) return colorings # construct colorings from cmd line args, data, config file etc colorings = _get_colorings() # ensure the data supports each coloring & ignore if not colorings = [c for c in colorings if _is_valid(c)] # add the title / type from config or via predefined logic rules. Note this can return False on an error. colorings = [x for x in [_add_title_and_type(coloring) for coloring in colorings] if x] # for each coloring, if colors have been provided, save them as a "scale" colorings = [_add_color_scale(coloring) for coloring in colorings] # for each coloring, pass-through the `legend` data from auspice_config.json, if provided colorings = [_add_legend(coloring) for coloring in colorings] # save them to the data json to be exported data_json['meta']["colorings"] = colorings def set_geo_resolutions(data_json, config, command_line_traits, lat_long_mapping, node_attrs): """ appropriately combine provided geo resolutions from command line & config files and associate with lat/longs. """ geo_resolutions = [] def _transfer_geo_data(node): for g in geo_resolutions: if g['key'] in node_attrs[node["name"]] and g['key'] not in node['node_attrs'] \ and is_valid(node_attrs[node["name"]][g['key']]): # don't add if not valid! node['node_attrs'][g['key']] = {"value":node_attrs[node["name"]][g['key']]} if "children" in node: for c in node["children"]: _transfer_geo_data(c) # step 1: get a list of resolutions if command_line_traits: # straight overwrite -- not an extension of those which may be provided in the config traits = [{"key": x} for x in command_line_traits] elif config.get("geo_resolutions"): config_geo = config.get("geo_resolutions") # If is set up correctly as dict with "key", take it as-is if all( (isinstance(entry, dict) and "key" in entry.keys()) for entry in config_geo): traits = config.get("geo_resolutions") # If is a list of strings, or mix of strings and dicts with "key", we can do this! elif all( (isinstance(entry, dict) and "key" in entry.keys()) or isinstance(entry, str) for entry in config_geo): traits = [entry if isinstance(entry, dict) else {"key": entry} for entry in config_geo] else: print("WARNING: [config file] 'geo_resolutions' is not in an acceptible format. The field is now list of strings, or list of dicts each with format {\"key\":\"country\"}") print("\t It is being ignored - this run will have no geo_resolutions.\n") return False elif config.get("geo"): traits = [{"key": x} for x in config.get("geo")] deprecated("[config file] 'geo' has been replaced with 'geo_resolutions'. The field is now list of strings, or list of dicts each with format {\"key\":\"country\"}") else: return False # step 2: for each resolution, create the map of deme name -> lat/long for trait_info in traits: deme_to_lat_longs = {} trait_values = get_values_across_nodes(node_attrs, trait_info["key"]) # e.g. list of countries, regions etc for deme in trait_values: # note: deme may be numeric, or string try: deme_search_value = deme.lower() except AttributeError: deme_search_value = str(deme) try: deme_to_lat_longs[deme] = lat_long_mapping[(trait_info["key"].lower(), deme_search_value)] except KeyError: warn("{}->{} did not have an associated lat/long value (matching performed in lower case). Auspice won't be able to display this location.".format(trait_info["key"], deme)) if deme_to_lat_longs: data = {"key": trait_info["key"], "demes": deme_to_lat_longs} if "title" in trait_info: data["title"] = trait_info["title"] geo_resolutions.append(data) else: warn("Geo resolution \"{}\" had no demes with supplied lat/longs and will be excluded from the exported \"geo_resolutions\".".format(trait_info["key"])) # _transfer_geo_data(data_json['tree']) if geo_resolutions: data_json['meta']["geo_resolutions"] = geo_resolutions def set_annotations(data_json, node_data): if "annotations" in node_data: data_json['meta']["genome_annotations"] = node_data["annotations"] def set_filters(data_json, config): # NB set_colorings() must have been run as we access those results if config.get('filters') == []: # an empty config section indicates no filters are to be exported data_json['meta']['filters'] = [] elif config.get('filters'): # set filters as long as they are not continuous data_json['meta']['filters'] = config['filters'] else: # if not specified in the config, include all boolean and categorical colorbys potentials = {coloring["key"] for coloring in data_json['meta']["colorings"] if coloring["type"] != "continuous" and coloring["key"] != 'gt'} data_json['meta']['filters'] = list(potentials) def validate_data_json(filename, validation_mode=ValidationMode.ERROR): if validation_mode is ValidationMode.SKIP: print(f"Skipping validation of produced JSON due to --validation-mode={validation_mode.value} or --skip-validation.") return print("Validating produced JSON") try: validate_v2(main_json=filename) except ValidateError as e: print(e) print("\n------------------------") print("Validation of {} failed. Please check this in a local instance of `auspice`, as it is not expected to display correctly. ".format(filename)) print("------------------------") validation_failure(validation_mode) def validation_failure(mode: ValidationMode): if mode is ValidationMode.ERROR: sys.exit(2) elif mode is ValidationMode.WARN: print(f"Continuing due to --validation-mode={mode.value} even though there were validation errors.") elif mode is ValidationMode.SKIP: # Shouldn't be doing validation under skip, but if we're called anyway just do nothing. return else: raise ValueError(f"unknown validation mode: {mode!r}") def set_panels(data_json, config, cmd_line_panels): # config set panels overrides cmd-line provided panels panels = config["panels"] if config.get("panels") else cmd_line_panels if not panels: panels = ["tree", "map", "entropy"] if data_json["meta"].get("genome_annotations", None): annotations = data_json["meta"]["genome_annotations"].keys() else: annotations = [] if "entropy" in panels and len(annotations) == 0: panels.remove("entropy") # for map to be displayed, we need to have valid geo resolutions if "map" in panels: if "geo_resolutions" not in data_json["meta"] or not data_json["meta"]["geo_resolutions"]: panels.remove("map") data_json['meta']["panels"] = panels def set_data_provenance(data_json, config): """Set the data provenance from the given config file to the given data JSON. Parameters ---------- data_json : dict auspice JSON to be updated config : dict config JSON with an expected ``data_provenance`` key Examples -------- >>> config = {"data_provenance": [{"name": "GISAID"}, {"name": "INSDC"}]} >>> data_json = {"meta": {}} >>> set_data_provenance(data_json, config) >>> data_json["meta"]["data_provenance"][0]["name"] 'GISAID' """ if "data_provenance" in config: data_json["meta"]["data_provenance"] = config["data_provenance"] def counter_to_disambiguation_suffix(count): """Given a numeric count of author papers, return a distinct alphabetical disambiguation suffix. Examples -------- >>> counter_to_disambiguation_suffix(0) 'A' >>> counter_to_disambiguation_suffix(25) 'Z' >>> counter_to_disambiguation_suffix(26) 'AA' >>> counter_to_disambiguation_suffix(51) 'AZ' >>> counter_to_disambiguation_suffix(52) 'BA' """ letters = "ABCDEFGHIJKLMNOPQRSTUVWXYZ" base = len(letters) suffix = deque() # Find the appropriate combination of letters for the given count. This # closely resembles the steps required to calculate the base 26 value of the # given base 10 number. while True: quotient = count // base remainder = count % base # Collect remainders from right to left. Letters are zero-indexed such # that a count of 0 returns an "A". suffix.appendleft(letters[remainder]) # Stop when we've accounted for all possible quotient and remainder # values. if quotient == 0: break # Convert counts to zero-indexed values such that the next place value # starts with the letter "A" instead of the letter "B". count = quotient - 1 return "".join(suffix) def create_author_data(node_attrs): """Gather the authors which appear in the metadata and create the author info structure with unique keys """ def node_to_author_tuple(data): # make a unique list of citations to disambiguate # Hadfield et al A, Hadfield et al B, etc... return ( data.get("author", "unknown"), data.get("title", "unknown"), data.get("journal", "unknown") ) author_to_unique_tuples = defaultdict(list) node_author_info = {} # first pass: for node_name, node_info in node_attrs.items(): author = node_info.get("author") if not author: author = node_info.get("authors") if not author: continue # internal node / terminal node without authors node_author_info[node_name] = {"author": author} if "title" in node_info: title = node_info["title"].strip() if is_valid(title): node_author_info[node_name]["title"] = title if "journal" in node_info: journal = node_info["journal"].strip() if is_valid(journal): node_author_info[node_name]["journal"] = journal if "paper_url" in node_info: paper_url = node_info["paper_url"].strip() if is_valid(paper_url): node_author_info[node_name]["paper_url"] = paper_url author_tuple = node_to_author_tuple(node_author_info[node_name]) # relies on defaultdict to initialize empty list if author_tuple not in author_to_unique_tuples[author]: author_to_unique_tuples[author].append(author_tuple) # second pass is necessary because we don't know if we need A, B, C # without a complete first pass for node_name, node_info in node_attrs.items(): if node_name not in node_author_info: continue # internal node / terminal node without authors author_tuple = node_to_author_tuple(node_author_info[node_name]) author = node_author_info[node_name]["author"] if len(author_to_unique_tuples[author]) > 1: index = author_to_unique_tuples[author].index(author_tuple) disambiguation_suffix = counter_to_disambiguation_suffix(index) node_author_info[node_name]["value"] = f"{author} {disambiguation_suffix}" else: node_author_info[node_name]["value"] = author return node_author_info def set_branch_attrs_on_tree(data_json, branch_attrs): """ Shifts the provided `branch_attrs` onto the (auspice) `data_json`. Currently all data is transferred, there is no way for (e.g.) the set of exported labels to be restricted by the user in a config. """ def _recursively_set_data(node): if branch_attrs.get(node['name'], {}): node['branch_attrs'] = branch_attrs[node['name']] for child in node.get("children", []): _recursively_set_data(child) _recursively_set_data(data_json["tree"]) def set_node_attrs_on_tree(data_json, node_attrs, additional_metadata_columns): ''' Assign desired colorings, metadata etc to the `node_attrs` of nodes in the tree Parameters ---------- data_json : dict node_attrs: dict keys: strain names. values: dict with keys -> all available metadata (even "excluded" keys), values -> data (string / numeric / bool) additional_metadata_columns: list Requested additional metadata columns to export ''' author_data = create_author_data(node_attrs) def _transfer_additional_metadata_columns(node, raw_data): for col in additional_metadata_columns: if is_valid(raw_data.get(col, None)): node["node_attrs"][col] = {"value": raw_data[col]} def _transfer_vaccine_info(node, raw_data): if raw_data.get("vaccine"): node["node_attrs"]['vaccine'] = raw_data['vaccine'] def _transfer_hidden_flag(node, raw_data): hidden = raw_data.get("hidden", None) if hidden: if hidden in ["always", "divtree", "timetree"]: node["node_attrs"]["hidden"] = hidden elif hidden is True or str(hidden) == "1": # interpret this as hidden in both div + time tree node["node_attrs"]["hidden"] = "always" else: warn("Hidden node trait of {} is invalid. Ignoring.".format(hidden)) def _transfer_num_date(node, raw_data): if raw_data.get("numdate", None) and not raw_data.get("num_date", None): raw_data["num_date"] = raw_data["numdate"] del raw_data["numdate"] if is_valid(raw_data.get("num_date", None)): # it's ok not to have temporal information node["node_attrs"]["num_date"] = {"value": raw_data["num_date"]} if is_valid(raw_data.get("num_date_confidence", None)): node["node_attrs"]["num_date"]["confidence"] = raw_data["num_date_confidence"] def _transfer_url_accession(node, raw_data): for prop in ["url", "accession"]: if is_valid(raw_data.get(prop, None)): node["node_attrs"][prop] = str(raw_data[prop]) def _transfer_colorings_filters(node, raw_data): trait_keys = set() # order we add to the node_attrs is not important for auspice if "colorings" in data_json["meta"]: trait_keys = trait_keys.union([t["key"] for t in data_json["meta"]["colorings"]]) if "filters" in data_json["meta"]: trait_keys = trait_keys.union(data_json["meta"]["filters"]) exclude_list = ["gt", "num_date", "author"] # exclude special cases already taken care of trait_keys = trait_keys.difference(exclude_list) for key in trait_keys: if is_valid(raw_data.get(key, None)): node["node_attrs"][key] = {"value": raw_data[key]} if is_valid(raw_data.get(key+"_confidence", None)): node["node_attrs"][key]["confidence"] = raw_data[key+"_confidence"] if is_valid(raw_data.get(key+"_entropy", None)): node["node_attrs"][key]["entropy"] = raw_data[key+"_entropy"] def _transfer_author_data(node): if node["name"] in author_data: node["node_attrs"]["author"] = author_data[node["name"]] def _recursively_set_data(node): # get all the available information for this particular node raw_data = node_attrs[node["name"]] # transfer requested metadata columns first so that the "special cases" # below can overwrite them as necessary _transfer_additional_metadata_columns(node, raw_data) # transfer "special cases" _transfer_vaccine_info(node, raw_data) _transfer_hidden_flag(node, raw_data) _transfer_num_date(node, raw_data) _transfer_url_accession(node, raw_data) _transfer_author_data(node) # transfer colorings & filters, including entropy & confidence if available _transfer_colorings_filters(node, raw_data) for child in node.get("children", []): _recursively_set_data(child) _recursively_set_data(data_json["tree"]) def node_data_prop_is_normal_trait(name): # those traits / keys / attrs which are not "special" and can be exported # as normal attributes on nodes excluded = [ "authors", # authors are set as a node property, not a trait property "author", # see above "vaccine", # vaccine info is stored as a "special" node prop 'clade_membership', # explicitly set as a coloring if present 'branch_length', 'num_date', # explicitly set as a coloring if present 'raw_date', 'numdate', 'clock_length', 'mutation_length', 'date', 'muts', 'aa_muts', 'sequence', 'aa_sequences', 'hidden', 'dTiter', 'dTiterSub' ] if name in excluded: return False if '_confidence' in name or '_entropy' in name: return False return True def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("v2", help=__doc__) required = parser.add_argument_group( title="REQUIRED" ) required.add_argument('--tree','-t', metavar="newick", required=True, help="Phylogenetic tree, usually output from `augur refine`") required.add_argument('--output', metavar="JSON", required=True, help="Output file (typically for visualisation in auspice)") config = parser.add_argument_group( title="DISPLAY CONFIGURATION", description="These control the display settings for auspice. \ You can supply a config JSON (which has all available options) or command line arguments (which are more limited but great to get started). \ Supplying both is fine too, command line args will overrule what is set in the config file!" ) config.add_argument('--auspice-config', metavar="JSON", help="Auspice configuration file") config.add_argument('--title', type=str, metavar="title", help="Title to be displayed by auspice") config.add_argument('--maintainers', metavar="name", action="append", nargs='+', help="Analysis maintained by, in format 'Name ' 'Name2 ', ...") config.add_argument('--build-url', type=str, metavar="url", help="Build URL/repository to be displayed by Auspice") config.add_argument('--description', metavar="description.md", help="Markdown file with description of build and/or acknowledgements to be displayed by Auspice") config.add_argument('--geo-resolutions', metavar="trait", nargs='+', help="Geographic traits to be displayed on map") config.add_argument('--color-by-metadata', metavar="trait", nargs='+', help="Metadata columns to include as coloring options") config.add_argument('--metadata-columns', nargs="+", help="Metadata columns to export in addition to columns provided by --color-by-metadata or colorings in the Auspice configuration file. " + "These columns will not be used as coloring options in Auspice but will be visible in the tree.") config.add_argument('--panels', metavar="panels", nargs='+', choices=['tree', 'map', 'entropy', 'frequencies', 'measurements'], help="Restrict panel display in auspice. Options are %(choices)s. Ignore this option to display all available panels.") optional_inputs = parser.add_argument_group( title="OPTIONAL INPUT FILES" ) optional_inputs.add_argument('--node-data', metavar="JSON", nargs='+', action="extend", help="JSON files containing metadata for nodes in the tree") optional_inputs.add_argument('--metadata', metavar="FILE", help="Additional metadata for strains in the tree") optional_inputs.add_argument('--metadata-delimiters', default=DEFAULT_DELIMITERS, nargs="+", help="delimiters to accept when reading a metadata file. Only one delimiter will be inferred.") optional_inputs.add_argument('--metadata-id-columns', default=DEFAULT_ID_COLUMNS, nargs="+", help="names of possible metadata columns containing identifier information, ordered by priority. Only one ID column will be inferred.") optional_inputs.add_argument('--colors', metavar="FILE", help="Custom color definitions, one per line in the format `TRAIT_TYPE\\tTRAIT_VALUE\\tHEX_CODE`") optional_inputs.add_argument('--lat-longs', metavar="TSV", help="Latitudes and longitudes for geography traits (overrides built in mappings)") minify_group = parser.add_argument_group( title="OPTIONAL MINIFY SETTINGS", description=f""" By default, output JSON files (both main and sidecar) are automatically minimized if the size of the un-minified main JSON file exceeds {MINIFY_THRESHOLD_MB} MB. Use these options to override that behavior. """ ).add_mutually_exclusive_group() minify_group.add_argument('--minify-json', action="store_true", help="always export JSONs without indentation or line returns.") minify_group.add_argument('--no-minify-json', action="store_true", help="always export JSONs to be human readable.") optional_settings = parser.add_argument_group( title="OTHER OPTIONAL SETTINGS" ) root_sequence = optional_settings.add_mutually_exclusive_group() root_sequence.add_argument('--include-root-sequence', action="store_true", help="Export an additional JSON containing the root sequence (reference sequence for vcf) used to identify mutations. The filename will follow the pattern of _root-sequence.json for a main auspice JSON of .json") root_sequence.add_argument('--include-root-sequence-inline', action="store_true", help="Export the root sequence (reference sequence for vcf) used to identify mutations as part of the main dataset JSON. This should only be used for small genomes for file size reasons.") optional_settings.add_argument( '--validation-mode', dest="validation_mode", type=ValidationMode, choices=[mode for mode in ValidationMode], default=ValidationMode.ERROR, help=""" Control if optional validation checks are performed and what happens if they fail. 'error' and 'warn' modes perform validation and emit messages about failed validation checks. 'error' mode causes a non-zero exit status if any validation checks failed, while 'warn' does not. 'skip' mode performs no validation. Note that some validation checks are non-optional and as such are not affected by this setting. """) optional_settings.add_argument( '--skip-validation', dest="validation_mode", action="store_const", const=ValidationMode.SKIP, help="Skip validation of input/output files, equivalent to --validation-mode=skip. Use at your own risk!") return parser def set_display_defaults(data_json, config): # Note: these cannot be provided via command line args if config.get("display_defaults"): defaults = config["display_defaults"] if config.get("defaults"): deprecated("[config file] both 'defaults' (deprecated) and 'display_defaults' provided. Ignoring the former.") elif config.get("defaults"): deprecated("[config file] 'defaults' has been replaced with 'display_defaults'") defaults = config["defaults"] else: return v1_v2_keys = [ # each item: [0] v2 key name. [1] deprecated v1 key name ["geo_resolution", "geoResolution"], ["color_by", "colorBy"], ["distance_measure", "distanceMeasure"], ["map_triplicate", "mapTriplicate"] ] for [v2_key, v1_key] in [x for x in v1_v2_keys if x[1] in defaults]: deprecated("[config file] '{}' has been replaced with '{}'".format(v1_key, v2_key)) defaults[v2_key] = defaults[v1_key] del defaults[v1_key] if defaults: data_json['meta']["display_defaults"] = defaults def set_maintainers(data_json, config, cmd_line_maintainers): # Command-line args overwrite the config file # Command-line info could come in as multiple lists w/multiple values, ex: # [['Name1 '], ['Name2 ', 'Name3 '], ['Name4 ']] # They may or may not all have URLs if cmd_line_maintainers: maintainers = [] for arg_entry in cmd_line_maintainers: for maint in arg_entry: res = re.search('<(.*)>', maint) url = res.group(1) if res else '' name = maint.split("<")[0].strip() tmp_dict = {'name': name} if url: tmp_dict['url'] = url maintainers.append(tmp_dict) data_json['meta']['maintainers'] = maintainers elif config.get("maintainer"): # v1-type specification data_json['meta']["maintainers"] = [{ "name": config["maintainer"][0], "url": config["maintainer"][1]}] elif config.get("maintainers"): # see schema for details data_json['meta']['maintainers'] = config['maintainers'] else: warn("You didn't provide information on who is maintaining this analysis.") def set_title(data_json, config, cmd_line_title): # title is not necessary. Cmd line args override any config settings if cmd_line_title: data_json['meta']['title'] = cmd_line_title elif config.get("title"): data_json['meta']['title'] = config.get("title") def set_build_url(data_json, config, cmd_line_build_url): # build_url is not necessary. Cmd line args override any config settings if cmd_line_build_url: data_json['meta']['build_url'] = cmd_line_build_url elif config.get("build_url"): data_json['meta']['build_url'] = config.get("build_url") def set_description(data_json, cmd_line_description_file): """ Read Markdown file provided by *cmd_line_description_file* and set `meta.description` in *data_json* to the text provided. """ try: with open_file(cmd_line_description_file) as description_file: markdown_text = description_file.read() data_json['meta']['description'] = markdown_text except FileNotFoundError: fatal("Provided desciption file {} does not exist".format(cmd_line_description_file)) def create_branch_mutations(branch_attrs, node_data): for node_name, node_info in node_data['nodes'].items(): if node_name not in branch_attrs: continue # strain name not in the tree if "aa_muts" not in node_info and "muts" not in node_info: continue branch_attrs[node_name]['mutations'] = {} if "muts" in node_info and len(node_info["muts"]): branch_attrs[node_name]["mutations"]["nuc"] = node_info["muts"] if "aa_muts" in node_info: aa = {gene:data for gene, data in node_info["aa_muts"].items() if len(data)} branch_attrs[node_name]["mutations"].update(aa) def create_branch_labels(branch_attrs, node_data, branch_data): ## start by creating the 'aa' branch label, summarising any amino acid mutations. ## (We have already set mutations on 'branch_attrs' if they exist, just not the label) ## This is done first so that if the user defines their own 'aa' labels they will ## overwrite the ones created here for branch_info in branch_attrs.values(): genes = [gene for gene in branch_info.get('mutations', {}) if gene!='nuc'] if len(genes): branch_info['labels']['aa'] = \ '; '.join(f"{gene}: {', '.join(branch_info['mutations'][gene])}" for gene in genes) ## check for the special key 'clade_annotation' defined via node data. ## For historical reasons, this is interpreted as a branch label 'clade' for node_name, node_info in node_data.items(): if node_name in branch_attrs and "clade_annotation" in node_info and is_valid(node_info["clade_annotation"]): branch_attrs[node_name]['labels']['clade'] = node_info["clade_annotation"] ## finally transfer any labels defined via -> 'branches' -> labels for node_name, branch_info in branch_data.items(): if node_name not in branch_attrs: continue for label_key, label_value in branch_info.get('labels', {}).items(): if label_key.upper() == "NONE" or not is_valid(label_value): continue branch_attrs[node_name]["labels"][label_key] = label_value def parse_node_data_and_metadata(T, node_data, metadata): node_data_names = set() metadata_names = set() # assign everything to node_attrs, exclusions considered later node_attrs = {clade.name: {} for clade in T.root.find_clades()} # first pass: metadata for metadata_id, node in metadata.items(): if metadata_id in node_attrs: # i.e. this node name is in the tree for key, value in node.items(): corrected_key = update_deprecated_names(key) node_attrs[metadata_id][corrected_key] = value metadata_names.add(corrected_key) # second pass: node data JSONs (overwrites keys of same name found in metadata) node_attrs_which_are_actually_branch_attrs = ["clade_annotation", "aa_muts", "muts"] for name, info in node_data['nodes'].items(): if name in node_attrs: # i.e. this node name is in the tree for key, value in info.items(): if key in node_attrs_which_are_actually_branch_attrs: continue # these will be handled below corrected_key = update_deprecated_names(key) node_attrs[name][corrected_key] = value node_data_names.add(corrected_key) # third pass: create `branch_attrs`. The data comes from # (a) some keys within `node_data['nodes']` (for legacy reasons) # (b) the `node_data['branches']` dictionary, which currently only defines labels branch_attrs = {clade.name: defaultdict(dict) for clade in T.root.find_clades()} create_branch_mutations(branch_attrs, node_data) create_branch_labels(branch_attrs, node_data['nodes'], node_data.get('branches', {})) return (node_data, node_attrs, node_data_names, metadata_names, branch_attrs) def get_config(args): if not args.auspice_config: return {} config = read_config(args.auspice_config) if args.validation_mode is not ValidationMode.SKIP: try: print("Validating config file {} against the JSON schema".format(args.auspice_config)) validate_auspice_config_v2(args.auspice_config) except ValidateError: print("Validation of {} failed. Please check the formatting of this file & refer to the augur documentation for further help. ".format(args.auspice_config)) validation_failure(args.validation_mode) # Print a warning about the inclusion of "vaccine_choices" which are _unused_ by `export v2` # (They are in the schema as this allows v1-compat configs to be used) if config.get("vaccine_choices"): warning("The config JSON can no longer specify the `vaccine_choices`, they must be specified through a node-data JSON. This info will be unused.") del config["vaccine_choices"] return config def get_additional_metadata_columns(config, command_line_metadata_columns, metadata_names): # Command line args override what is set in the config file if command_line_metadata_columns: potential_metadata_columns = command_line_metadata_columns else: potential_metadata_columns = config.get("metadata_columns", []) additional_metadata_columns = [] for col in potential_metadata_columns: # Match the column names corrected within parse_node_data_and_metadata corrected_col = update_deprecated_names(col) if corrected_col not in metadata_names: warn(f"Requested metadata column {col!r} does not exist and will not be exported") continue additional_metadata_columns.append(corrected_col) return additional_metadata_columns def run(args): configure_warnings() data_json = {"version": "v2", "meta": {"updated": time.strftime('%Y-%m-%d')}} #load input files if args.node_data is not None: try: node_data_file = read_node_data(args.node_data, validation_mode=args.validation_mode) # node_data_files is an array of multiple files (or a single file) except FileNotFoundError: print(f"ERROR: node data file ({args.node_data}) does not exist") sys.exit(2) else: node_data_file = {'nodes': {}} if args.metadata is not None: try: metadata_df = read_metadata( args.metadata, delimiters=args.metadata_delimiters, id_columns=args.metadata_id_columns) # Add the index as a column. metadata_df[metadata_df.index.name] = metadata_df.index metadata_file = metadata_df.to_dict(orient="index") except FileNotFoundError: print(f"ERROR: meta data file ({args.metadata}) does not exist", file=sys.stderr) sys.exit(2) except InvalidDelimiter: raise AugurError( f"Could not determine the delimiter of {args.metadata!r}. " f"Valid delimiters are: {args.metadata_delimiters!r}. " "This can be changed with --metadata-delimiters." ) except Exception as error: print(f"ERROR: {error}", file=sys.stderr) sys.exit(1) else: metadata_file = {} # parse input files T = Phylo.read(args.tree, 'newick') node_data, node_attrs, node_data_names, metadata_names, branch_attrs = \ parse_node_data_and_metadata(T, node_data_file, metadata_file) config = get_config(args) additional_metadata_columns = get_additional_metadata_columns(config, args.metadata_columns, metadata_names) # set metadata data structures set_title(data_json, config, args.title) set_display_defaults(data_json, config) set_maintainers(data_json, config, args.maintainers) set_build_url(data_json, config, args.build_url) set_annotations(data_json, node_data) if args.description: set_description(data_json, args.description) try: set_colorings( data_json=data_json, config=get_config_colorings_as_dict(config), command_line_colorings=args.color_by_metadata, metadata_names=metadata_names, node_data_colorings=node_data_names, provided_colors=read_colors(args.colors), node_attrs=node_attrs, branch_attrs=branch_attrs ) except FileNotFoundError as e: print(f"ERROR: required file could not be read: {e}") sys.exit(2) set_filters(data_json, config) # set tree structure data_json["tree"] = convert_tree_to_json_structure(T.root, node_attrs, node_div(T, node_attrs)) set_node_attrs_on_tree(data_json, node_attrs, additional_metadata_columns) set_branch_attrs_on_tree(data_json, branch_attrs) set_geo_resolutions(data_json, config, args.geo_resolutions, read_lat_longs(args.lat_longs), node_attrs) set_panels(data_json, config, args.panels) set_data_provenance(data_json, config) # pass through any extensions block in the auspice config JSON without any changes / checking if config.get("extensions"): data_json["meta"]["extensions"] = config["extensions"] # Should output be minified? # User-specified arguments take precedence before determining behavior based # on the size of the tree. if args.minify_json or os.environ.get("AUGUR_MINIFY_JSON"): minify = True elif args.no_minify_json: minify = False else: if json_size(data_json) > MINIFY_THRESHOLD_MB * 10**6: minify = True else: minify = False # Write outputs - the (unified) dataset JSON intended for auspice & perhaps the ref root-sequence JSON indent = {"indent": None} if minify else {} if args.include_root_sequence or args.include_root_sequence_inline: # Note - argparse enforces that only one of these args will be true if 'reference' in node_data: if args.include_root_sequence_inline: data_json['root_sequence'] = node_data['reference'] elif args.include_root_sequence: # Save the root sequence with the same stem from the main auspice # output filename. For example, if the main auspice output is # "auspice/zika.json", the root sequence will be # "auspice/zika_root-sequence.json". output_path = Path(args.output) root_sequence_path = output_path.parent / Path(output_path.stem + "_root-sequence" + output_path.suffix) write_json(data=node_data['reference'], file=root_sequence_path, include_version=False, **indent) else: fatal("Root sequence output was requested, but the node data provided is missing a 'reference' key.") write_json(data=orderKeys(data_json), file=args.output, include_version=False, **indent) # validate outputs validate_data_json(args.output, args.validation_mode) if deprecationWarningsEmitted: print("\n------------------------") print("There were deprecation warnings displayed. They have been fixed but these will likely become breaking errors in a future version of augur.") print("------------------------") print("") augur-24.2.2/augur/filenames.py000066400000000000000000000000511456376326500164010ustar00rootroot00000000000000 timetree_fname = "{base}_timetree.nwk" augur-24.2.2/augur/filter/000077500000000000000000000000001456376326500153555ustar00rootroot00000000000000augur-24.2.2/augur/filter/__init__.py000066400000000000000000000214021456376326500174650ustar00rootroot00000000000000""" Filter and subsample a sequence set. """ from augur.dates import numeric_date_type, SUPPORTED_DATE_HELP_TEXT from augur.filter.io import ACCEPTED_TYPES, column_type_pair from augur.io.metadata import DEFAULT_DELIMITERS, DEFAULT_ID_COLUMNS, METADATA_DATE_COLUMN from augur.types import EmptyOutputReportingMethod from . import constants def register_arguments(parser): """ Add arguments to parser. Kept as a separate function than `register_parser` to continue to support unit tests that use this function to create argparser. """ input_group = parser.add_argument_group("inputs", "metadata and sequences to be filtered") input_group.add_argument('--metadata', required=True, metavar="FILE", help="sequence metadata") input_group.add_argument('--sequences', '-s', help="sequences in FASTA or VCF format") input_group.add_argument('--sequence-index', help="sequence composition report generated by augur index. If not provided, an index will be created on the fly.") input_group.add_argument('--metadata-chunk-size', type=int, default=100000, help="maximum number of metadata records to read into memory at a time. Increasing this number can speed up filtering at the cost of more memory used.") input_group.add_argument('--metadata-id-columns', default=DEFAULT_ID_COLUMNS, nargs="+", help="names of possible metadata columns containing identifier information, ordered by priority. Only one ID column will be inferred.") input_group.add_argument('--metadata-delimiters', default=DEFAULT_DELIMITERS, nargs="+", help="delimiters to accept when reading a metadata file. Only one delimiter will be inferred.") metadata_filter_group = parser.add_argument_group("metadata filters", "filters to apply to metadata") metadata_filter_group.add_argument( '--query', help="""Filter samples by attribute. Uses Pandas Dataframe querying, see https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#indexing-query for syntax. (e.g., --query "country == 'Colombia'" or --query "(country == 'USA' & (division == 'Washington'))")""" ) metadata_filter_group.add_argument('--query-columns', type=column_type_pair, nargs="+", help=f""" Use alongside --query to specify columns and data types in the format 'column:type', where type is one of ({','.join(ACCEPTED_TYPES)}). Automatic type inference will be attempted on all unspecified columns used in the query. Example: region:str coverage:float. """) metadata_filter_group.add_argument('--min-date', type=numeric_date_type, help=f"minimal cutoff for date, the cutoff date is inclusive; may be specified as: {SUPPORTED_DATE_HELP_TEXT}") metadata_filter_group.add_argument('--max-date', type=numeric_date_type, help=f"maximal cutoff for date, the cutoff date is inclusive; may be specified as: {SUPPORTED_DATE_HELP_TEXT}") metadata_filter_group.add_argument('--exclude-ambiguous-dates-by', choices=['any', 'day', 'month', 'year'], help='Exclude ambiguous dates by day (e.g., 2020-09-XX), month (e.g., 2020-XX-XX), year (e.g., 200X-10-01), or any date fields. An ambiguous year makes the corresponding month and day ambiguous, too, even if those fields have unambiguous values (e.g., "201X-10-01"). Similarly, an ambiguous month makes the corresponding day ambiguous (e.g., "2010-XX-01").') metadata_filter_group.add_argument('--exclude', type=str, nargs="+", help="file(s) with list of strains to exclude") metadata_filter_group.add_argument('--exclude-where', nargs='+', help="Exclude samples matching these conditions. Ex: \"host=rat\" or \"host!=rat\". Multiple values are processed as OR (matching any of those specified will be excluded), not AND") metadata_filter_group.add_argument('--exclude-all', action="store_true", help="exclude all strains by default. Use this with the include arguments to select a specific subset of strains.") metadata_filter_group.add_argument('--include', type=str, nargs="+", help="file(s) with list of strains to include regardless of priorities, subsampling, or absence of an entry in --sequences.") metadata_filter_group.add_argument('--include-where', nargs='+', help=""" Include samples with these values. ex: host=rat. Multiple values are processed as OR (having any of those specified will be included), not AND. This rule is applied last and ensures any strains matching these rules will be included regardless of priorities, subsampling, or absence of an entry in --sequences.""") sequence_filter_group = parser.add_argument_group("sequence filters", "filters to apply to sequence data") sequence_filter_group.add_argument('--min-length', type=int, help="minimal length of the sequences") sequence_filter_group.add_argument('--non-nucleotide', action='store_true', help="exclude sequences that contain illegal characters") subsample_group = parser.add_argument_group("subsampling", "options to subsample filtered data") subsample_group.add_argument('--group-by', nargs='+', help=f""" categories with respect to subsample. Notes: (1) Grouping by {sorted(constants.GROUP_BY_GENERATED_COLUMNS)} is only supported when there is a {METADATA_DATE_COLUMN!r} column in the metadata. (2) 'week' uses the ISO week numbering system, where a week starts on a Monday and ends on a Sunday. (3) 'month' and 'week' grouping cannot be used together. (4) Custom columns {sorted(constants.GROUP_BY_GENERATED_COLUMNS)} in the metadata are ignored for grouping. Please rename them if you want to use their values for grouping.""") subsample_limits_group = subsample_group.add_mutually_exclusive_group() subsample_limits_group.add_argument('--sequences-per-group', type=int, help="subsample to no more than this number of sequences per category") subsample_limits_group.add_argument('--subsample-max-sequences', type=int, help="subsample to no more than this number of sequences; can be used without the group_by argument") probabilistic_sampling_group = subsample_group.add_mutually_exclusive_group() probabilistic_sampling_group.add_argument('--probabilistic-sampling', action='store_true', help="Allow probabilistic sampling during subsampling. This is useful when there are more groups than requested sequences. This option only applies when `--subsample-max-sequences` is provided.") probabilistic_sampling_group.add_argument('--no-probabilistic-sampling', action='store_false', dest='probabilistic_sampling') subsample_group.add_argument('--priority', type=str, help="""tab-delimited file with list of priority scores for strains (e.g., "\\t") and no header. When scores are provided, Augur converts scores to floating point values, sorts strains within each subsampling group from highest to lowest priority, and selects the top N strains per group where N is the calculated or requested number of strains per group. Higher numbers indicate higher priority. Since priorities represent relative values between strains, these values can be arbitrary.""") subsample_group.add_argument('--subsample-seed', type=int, help="random number generator seed to allow reproducible subsampling (with same input data).") output_group = parser.add_argument_group("outputs", "options related to outputs, at least one of the possible representations of filtered data (--output, --output-metadata, --output-strains) is required") output_group.add_argument('--output', '--output-sequences', '-o', help="filtered sequences in FASTA format") output_group.add_argument('--output-metadata', help="metadata for strains that passed filters") output_group.add_argument('--output-strains', help="list of strains that passed filters (no header)") output_group.add_argument('--output-log', help="tab-delimited file with one row for each filtered strain and the reason it was filtered. Keyword arguments used for a given filter are reported in JSON format in a `kwargs` column.") output_group.add_argument( '--empty-output-reporting', type=EmptyOutputReportingMethod.argtype, choices=list(EmptyOutputReportingMethod), default=EmptyOutputReportingMethod.ERROR, help="How should empty outputs be reported when no strains pass filtering and/or subsampling.") parser.set_defaults(probabilistic_sampling=True) def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("filter", help=__doc__) register_arguments(parser) return parser def run(args): ''' filter and subsample a set of sequences into an analysis set ''' from .validate_arguments import validate_arguments # Validate arguments before attempting any I/O. validate_arguments(args) from ._run import run as _run return _run(args) augur-24.2.2/augur/filter/_run.py000066400000000000000000000535351456376326500167050ustar00rootroot00000000000000from collections import defaultdict import csv import itertools import json import numpy as np import os import pandas as pd from tempfile import NamedTemporaryFile from augur.errors import AugurError from augur.index import ( index_sequences, index_vcf, ID_COLUMN as SEQUENCE_INDEX_ID_COLUMN, DELIMITER as SEQUENCE_INDEX_DELIMITER, ) from augur.io.file import PANDAS_READ_CSV_OPTIONS, open_file from augur.io.metadata import InvalidDelimiter, Metadata, read_metadata from augur.io.sequences import read_sequences, write_sequences from augur.io.print import print_err from augur.io.vcf import is_vcf as filename_is_vcf, write_vcf from augur.types import EmptyOutputReportingMethod from . import include_exclude_rules from .io import cleanup_outputs, get_useful_metadata_columns, read_priority_scores, write_metadata_based_outputs from .include_exclude_rules import apply_filters, construct_filters from .subsample import PriorityQueue, TooManyGroupsError, calculate_sequences_per_group, create_queues_by_group, get_groups_for_subsampling def run(args): # Determine whether the sequence index exists or whether should be # generated. We need to generate an index if the input sequences are in a # VCF, if sequence output has been requested (so we can filter strains by # sequences that are present), or if any other sequence-based filters have # been requested. sequence_strains = None sequence_index_path = args.sequence_index build_sequence_index = False is_vcf = filename_is_vcf(args.sequences) # Don't build sequence index with --exclude-all since the only way to add # strains back in with this flag are the `--include` or `--include-where` # options, so we know we don't need a sequence index to apply any additional # filters. if sequence_index_path is None and args.sequences and not args.exclude_all: build_sequence_index = True if build_sequence_index: # Generate the sequence index on the fly, for backwards compatibility # with older workflows that don't generate the index ahead of time. # Create a temporary index using a random filename to avoid collisions # between multiple filter commands. with NamedTemporaryFile(delete=False) as sequence_index_file: sequence_index_path = sequence_index_file.name print_err( "Note: You did not provide a sequence index, so Augur will generate one.", "You can generate your own index ahead of time with `augur index` and pass it with `augur filter --sequence-index`." ) if is_vcf: index_vcf(args.sequences, sequence_index_path) else: index_sequences(args.sequences, sequence_index_path) # Load the sequence index, if a path exists. sequence_index = None if sequence_index_path: sequence_index = pd.read_csv( sequence_index_path, sep=SEQUENCE_INDEX_DELIMITER, index_col=SEQUENCE_INDEX_ID_COLUMN, dtype={SEQUENCE_INDEX_ID_COLUMN: "string"}, **PANDAS_READ_CSV_OPTIONS, ) # Remove temporary index file, if it exists. if build_sequence_index: os.unlink(sequence_index_path) sequence_strains = set(sequence_index.index.values) ##################################### #Filtering steps ##################################### # Setup filters. exclude_by, include_by = construct_filters( args, sequence_index, ) # Setup grouping. We handle the following major use cases: # # 1. group by and sequences per group defined -> use the given values by the # user to identify the highest priority records from each group in a single # pass through the metadata. # # 2. group by and maximum sequences defined -> use the first pass through # the metadata to count the number of records in each group, calculate the # sequences per group that satisfies the requested maximum, and use a second # pass through the metadata to select that many sequences per group. # # 3. group by not defined but maximum sequences defined -> use a "dummy" # group such that we select at most the requested maximum number of # sequences in a single pass through the metadata. # # Each case relies on a priority queue to track the highest priority records # per group. In the best case, we can track these records in a single pass # through the metadata. In the worst case, we don't know how many sequences # per group to use, so we need to calculate this number after the first pass # and use a second pass to add records to the queue. group_by = args.group_by sequences_per_group = args.sequences_per_group records_per_group = None if group_by and args.subsample_max_sequences: # In this case, we need two passes through the metadata with the first # pass used to count the number of records per group. records_per_group = defaultdict(int) elif not group_by and args.subsample_max_sequences: group_by = ("_dummy",) sequences_per_group = args.subsample_max_sequences # If we are grouping data, use queues to store the highest priority strains # for each group. When no priorities are provided, they will be randomly # generated. queues_by_group = None if group_by: # Use user-defined priorities, if possible. Otherwise, setup a # corresponding dictionary that returns a random float for each strain. if args.priority: priorities = read_priority_scores(args.priority) else: random_generator = np.random.default_rng(args.subsample_seed) priorities = defaultdict(random_generator.random) # Setup logging. output_log_context_manager = open_file(args.output_log, "w", newline='') output_log_writer = None if args.output_log: # Log the names of strains that were filtered or force-included, so we # can properly account for each strain (e.g., including those that were # initially filtered for one reason and then included again for another # reason). output_log = output_log_context_manager.__enter__() output_log_header = ("strain", "filter", "kwargs") output_log_writer = csv.DictWriter( output_log, fieldnames=output_log_header, delimiter="\t", lineterminator="\n", ) output_log_writer.writeheader() # Load metadata. Metadata are the source of truth for which sequences we # want to keep in filtered output. metadata_strains = set() valid_strains = set() # TODO: rename this more clearly all_sequences_to_include = set() filter_counts = defaultdict(int) try: metadata_object = Metadata(args.metadata, args.metadata_delimiters, args.metadata_id_columns) except InvalidDelimiter: raise AugurError( f"Could not determine the delimiter of {args.metadata!r}. " f"Valid delimiters are: {args.metadata_delimiters!r}. " "This can be changed with --metadata-delimiters." ) useful_metadata_columns = get_useful_metadata_columns(args, metadata_object.id_column, metadata_object.columns) metadata_reader = read_metadata( args.metadata, delimiters=[metadata_object.delimiter], columns=useful_metadata_columns, id_columns=[metadata_object.id_column], chunk_size=args.metadata_chunk_size, dtype="string", ) for metadata in metadata_reader: duplicate_strains = ( set(metadata.index[metadata.index.duplicated()]) | set(metadata.index[metadata.index.isin(metadata_strains)]) ) if len(duplicate_strains) > 0: cleanup_outputs(args) raise AugurError(f"The following strains are duplicated in '{args.metadata}':\n" + "\n".join(sorted(duplicate_strains))) # Maintain list of all strains seen. metadata_strains.update(set(metadata.index.values)) # Filter metadata. seq_keep, sequences_to_filter, sequences_to_include = apply_filters( metadata, exclude_by, include_by, ) valid_strains.update(seq_keep) # Track distinct strains to include, so we can write their # corresponding metadata, strains, or sequences later, as needed. distinct_force_included_strains = { record["strain"] for record in sequences_to_include } all_sequences_to_include.update(distinct_force_included_strains) # Track reasons for filtered or force-included strains, so we can # report total numbers filtered and included at the end. Optionally, # write out these reasons to a log file. for filtered_strain in itertools.chain(sequences_to_filter, sequences_to_include): filter_counts[(filtered_strain["filter"], filtered_strain["kwargs"])] += 1 # Log the names of strains that were filtered or force-included, # so we can properly account for each strain (e.g., including # those that were initially filtered for one reason and then # included again for another reason). if args.output_log: output_log_writer.writerow(filtered_strain) if group_by: # Prevent force-included sequences from being included again during # subsampling. seq_keep = seq_keep - distinct_force_included_strains # If grouping, track the highest priority metadata records or # count the number of records per group. First, we need to get # the groups for the given records. group_by_strain = get_groups_for_subsampling( seq_keep, metadata, group_by, ) if args.subsample_max_sequences and records_per_group is not None: # Count the number of records per group. We will use this # information to calculate the number of sequences per group # for the given maximum number of requested sequences. for group in group_by_strain.values(): records_per_group[group] += 1 else: # Track the highest priority records, when we already # know the number of sequences allowed per group. if queues_by_group is None: queues_by_group = {} for strain in sorted(group_by_strain.keys()): # During this first pass, we do not know all possible # groups will be, so we need to build each group's queue # as we first encounter the group. group = group_by_strain[strain] if group not in queues_by_group: queues_by_group[group] = PriorityQueue( max_size=sequences_per_group, ) queues_by_group[group].add( metadata.loc[strain], priorities[strain], ) # In the worst case, we need to calculate sequences per group from the # requested maximum number of sequences and the number of sequences per # group. Then, we need to make a second pass through the metadata to find # the requested number of records. if args.subsample_max_sequences and records_per_group is not None: # Calculate sequences per group. If there are more groups than maximum # sequences requested, sequences per group will be a floating point # value and subsampling will be probabilistic. try: sequences_per_group, probabilistic_used = calculate_sequences_per_group( args.subsample_max_sequences, records_per_group.values(), args.probabilistic_sampling, ) except TooManyGroupsError as error: raise AugurError(error) if (probabilistic_used): print(f"Sampling probabilistically at {sequences_per_group:0.4f} sequences per group, meaning it is possible to have more than the requested maximum of {args.subsample_max_sequences} sequences after filtering.") else: print(f"Sampling at {sequences_per_group} per group.") if queues_by_group is None: # We know all of the possible groups now from the first pass through # the metadata, so we can create queues for all groups at once. queues_by_group = create_queues_by_group( records_per_group.keys(), sequences_per_group, random_seed=args.subsample_seed, ) # Make a second pass through the metadata, only considering records that # have passed filters. metadata_reader = read_metadata( args.metadata, delimiters=args.metadata_delimiters, columns=useful_metadata_columns, id_columns=args.metadata_id_columns, chunk_size=args.metadata_chunk_size, dtype="string", ) for metadata in metadata_reader: # Recalculate groups for subsampling as we loop through the # metadata a second time. TODO: We could store these in memory # during the first pass, but we want to minimize overall memory # usage at the moment. seq_keep = set(metadata.index.values) & valid_strains # Prevent force-included strains from being considered in this # second pass, as in the first pass. seq_keep = seq_keep - all_sequences_to_include group_by_strain = get_groups_for_subsampling( seq_keep, metadata, group_by, ) for strain in sorted(group_by_strain.keys()): group = group_by_strain[strain] queues_by_group[group].add( metadata.loc[strain], priorities[strain], ) # If we have any records in queues, we have grouped results and need to # stream the highest priority records to the requested outputs. num_excluded_subsamp = 0 if queues_by_group: # Populate the set of strains to keep from the records in queues. subsampled_strains = set() for group, queue in queues_by_group.items(): records = [] for record in queue.get_items(): # Each record is a pandas.Series instance. Track the name of the # record, so we can output its sequences later. subsampled_strains.add(record.name) # Construct a data frame of records to simplify metadata output. records.append(record) # Count and optionally log strains that were not included due to # subsampling. strains_filtered_by_subsampling = valid_strains - subsampled_strains num_excluded_subsamp = len(strains_filtered_by_subsampling) if output_log_writer: for strain in strains_filtered_by_subsampling: output_log_writer.writerow({ "strain": strain, "filter": "subsampling", "kwargs": "", }) valid_strains = subsampled_strains # Force inclusion of specific strains after filtering and subsampling. valid_strains = valid_strains | all_sequences_to_include # Write output starting with sequences, if they've been requested. It is # possible for the input sequences and sequence index to be out of sync # (e.g., the index is a superset of the given sequences input), so we need # to update the set of strains to keep based on which strains are actually # available. if is_vcf: if args.output: # Get the samples to be deleted, not to keep, for VCF dropped_samps = list(sequence_strains - valid_strains) write_vcf(args.sequences, args.output, dropped_samps) elif args.sequences: sequences = read_sequences(args.sequences) # If the user requested sequence output, stream to disk all sequences # that passed all filters to avoid reading sequences into memory first. # Even if we aren't emitting sequences, we track the observed strain # names in the sequence file as part of the single pass to allow # comparison with the provided sequence index. if args.output: observed_sequence_strains = set() with open_file(args.output, "wt") as output_handle: for sequence in sequences: observed_sequence_strains.add(sequence.id) if sequence.id in valid_strains: write_sequences(sequence, output_handle, 'fasta') else: observed_sequence_strains = {sequence.id for sequence in sequences} if sequence_strains != observed_sequence_strains: # Warn the user if the expected strains from the sequence index are # not a superset of the observed strains. if sequence_strains is not None and observed_sequence_strains > sequence_strains: print_err( "WARNING: The sequence index is out of sync with the provided sequences.", "Metadata and strain output may not match sequence output." ) # Update the set of available sequence strains. sequence_strains = observed_sequence_strains if args.output_metadata or args.output_strains: write_metadata_based_outputs(args.metadata, args.metadata_delimiters, args.metadata_id_columns, args.output_metadata, args.output_strains, valid_strains) # Calculate the number of strains that don't exist in either metadata or # sequences. num_excluded_by_lack_of_metadata = 0 if sequence_strains: num_excluded_by_lack_of_metadata = len(sequence_strains - metadata_strains) # Calculate the number of strains passed and filtered. total_strains_passed = len(valid_strains) total_strains_filtered = len(metadata_strains) + num_excluded_by_lack_of_metadata - total_strains_passed print(f"{total_strains_filtered} {'strain was' if total_strains_filtered == 1 else 'strains were'} dropped during filtering") if num_excluded_by_lack_of_metadata: print(f"\t{num_excluded_by_lack_of_metadata} had no metadata") report_template_by_filter_name = { include_exclude_rules.filter_by_sequence_index.__name__: "{count} had no sequence data", include_exclude_rules.filter_by_exclude_all.__name__: "{count} {were} dropped by `--exclude-all`", include_exclude_rules.filter_by_exclude.__name__: "{count} {were} dropped because {they} {were} in {exclude_file}", include_exclude_rules.filter_by_exclude_where.__name__: "{count} {were} dropped because of '{exclude_where}'", include_exclude_rules.filter_by_query.__name__: "{count} {were} filtered out by the query: \"{query}\"", include_exclude_rules.filter_by_ambiguous_date.__name__: "{count} {were} dropped because of their ambiguous date in {ambiguity}", include_exclude_rules.filter_by_min_date.__name__: "{count} {were} dropped because {they} {were} earlier than {min_date} or missing a date", include_exclude_rules.filter_by_max_date.__name__: "{count} {were} dropped because {they} {were} later than {max_date} or missing a date", include_exclude_rules.filter_by_sequence_length.__name__: "{count} {were} dropped because {they} {were} shorter than minimum length of {min_length}bp", include_exclude_rules.filter_by_non_nucleotide.__name__: "{count} {were} dropped because {they} had non-nucleotide characters", include_exclude_rules.skip_group_by_with_ambiguous_year.__name__: "{count} {were} dropped during grouping due to ambiguous year information", include_exclude_rules.skip_group_by_with_ambiguous_month.__name__: "{count} {were} dropped during grouping due to ambiguous month information", include_exclude_rules.skip_group_by_with_ambiguous_day.__name__: "{count} {were} dropped during grouping due to ambiguous day information", include_exclude_rules.force_include_strains.__name__: "{count} {were} added back because {they} {were} in {include_file}", include_exclude_rules.force_include_where.__name__: "{count} {were} added back because of '{include_where}'", } for (filter_name, filter_kwargs), count in filter_counts.items(): if filter_kwargs: parameters = dict(json.loads(filter_kwargs)) else: parameters = {} parameters["count"] = count parameters["were"] = "was" if count == 1 else "were" parameters["they"] = "it" if count == 1 else "they" print("\t" + report_template_by_filter_name[filter_name].format(**parameters)) if (group_by and args.sequences_per_group) or args.subsample_max_sequences: seed_txt = ", using seed {}".format(args.subsample_seed) if args.subsample_seed else "" print(f"\t{num_excluded_subsamp} {'was' if num_excluded_subsamp == 1 else 'were'} dropped because of subsampling criteria{seed_txt}") if total_strains_passed == 0: empty_results_message = "All samples have been dropped! Check filter rules and metadata file format." if args.empty_output_reporting is EmptyOutputReportingMethod.ERROR: raise AugurError(empty_results_message) elif args.empty_output_reporting is EmptyOutputReportingMethod.WARN: print_err(f"WARNING: {empty_results_message}") elif args.empty_output_reporting is EmptyOutputReportingMethod.SILENT: pass else: raise ValueError(f"Encountered unhandled --empty-output-reporting method {args.empty_output_reporting!r}") print(f"{total_strains_passed} {'strain' if total_strains_passed == 1 else 'strains'} passed all filters") augur-24.2.2/augur/filter/constants.py000066400000000000000000000004451456376326500177460ustar00rootroot00000000000000# Generated date columns. DATE_YEAR_COLUMN = 'year' DATE_MONTH_COLUMN = 'month' DATE_WEEK_COLUMN = 'week' # Generated columns available for --group-by. # Use sorted() for reproducible output. GROUP_BY_GENERATED_COLUMNS = { DATE_YEAR_COLUMN, DATE_MONTH_COLUMN, DATE_WEEK_COLUMN, } augur-24.2.2/augur/filter/include_exclude_rules.py000066400000000000000000001046741456376326500223110ustar00rootroot00000000000000import ast import json import operator import re import numpy as np import pandas as pd from typing import Any, Callable, Dict, List, Optional, Set, Tuple from augur.dates import is_date_ambiguous, get_numerical_dates from augur.errors import AugurError from augur.io.metadata import METADATA_DATE_COLUMN from augur.io.print import print_err from augur.io.strains import read_strains from augur.io.vcf import is_vcf as filename_is_vcf from . import constants try: # pandas ≥1.5.0 only PandasUndefinedVariableError = pd.errors.UndefinedVariableError # type: ignore except AttributeError: PandasUndefinedVariableError = pd.core.computation.ops.UndefinedVariableError # type: ignore # The strains to keep as a result of applying a filter function. FilterFunctionReturn = Set[str] # A function to use for filtering. Parameters vary. FilterFunction = Callable[..., FilterFunctionReturn] # A dictionary of parameters to pass to the filter function. FilterFunctionKwargs = Dict[str, Any] # A pair of values to represent the filter function and parameters to use. FilterOption = Tuple[FilterFunction, FilterFunctionKwargs] def filter_by_exclude_all(metadata) -> FilterFunctionReturn: """Exclude all strains regardless of the given metadata content. This is a placeholder function that can be called as part of a generalized loop through all possible functions. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name Examples -------- >>> metadata = pd.DataFrame([{"region": "Africa"}, {"region": "Europe"}], index=["strain1", "strain2"]) >>> filter_by_exclude_all(metadata) set() """ return set() def filter_by_exclude(metadata, exclude_file) -> FilterFunctionReturn: """Exclude the given set of strains from the given metadata. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name exclude_file : str Filename with strain names to exclude from the given metadata Examples -------- >>> import os >>> from tempfile import NamedTemporaryFile >>> metadata = pd.DataFrame([{"region": "Africa"}, {"region": "Europe"}], index=["strain1", "strain2"]) >>> with NamedTemporaryFile(delete=False) as exclude_file: ... characters_written = exclude_file.write(b'strain1') >>> filter_by_exclude(metadata, exclude_file.name) {'strain2'} >>> os.unlink(exclude_file.name) """ excluded_strains = read_strains(exclude_file) return set(metadata.index.values) - excluded_strains def parse_filter_query(query): """Parse an augur filter-style query and return the corresponding column, operator, and value for the query. Parameters ---------- query : str augur filter-style query following the pattern of `"property=value"` or `"property!=value"` Returns ------- str : Name of column to query callable : Operator function to test equality or non-equality of values str : Value of column to query Examples -------- >>> parse_filter_query("property=value") ('property', , 'value') >>> parse_filter_query("property!=value") ('property', , 'value') """ column, value = re.split(r'!?=', query) op = operator.eq if "!=" in query: op = operator.ne return column, op, value def filter_by_exclude_where(metadata, exclude_where) -> FilterFunctionReturn: """Exclude all strains from the given metadata that match the given exclusion query. Unlike pandas query syntax, exclusion queries should follow the pattern of `"property=value"` or `"property!=value"`. Additionally, this filter treats all values like lowercase strings, so we convert all values to strings first and then lowercase them before testing the given query. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name exclude_where : str Filter query used to exclude strains Examples -------- >>> metadata = pd.DataFrame([{"region": "Africa"}, {"region": "Europe"}], index=["strain1", "strain2"]) >>> filter_by_exclude_where(metadata, "region!=Europe") {'strain2'} >>> filter_by_exclude_where(metadata, "region=Europe") {'strain1'} >>> filter_by_exclude_where(metadata, "region=europe") {'strain1'} If the column referenced in the given query does not exist, skip the filter. >>> sorted(filter_by_exclude_where(metadata, "missing_column=value")) ['strain1', 'strain2'] """ column, op, value = parse_filter_query(exclude_where) if column in metadata.columns: # Apply a test operator (equality or inequality) to values from the # column in the given query. This produces an array of boolean values we # can index with. excluded = op( metadata[column].astype(str).str.lower(), value.lower() ) # Negate the boolean index of excluded strains to get the index of # strains that passed the filter. included = ~excluded filtered = set(metadata[included].index.values) else: # Skip the filter, if the requested column does not exist. filtered = set(metadata.index.values) return filtered def filter_by_query(metadata: pd.DataFrame, query: str, column_types: Optional[Dict[str, str]] = None) -> FilterFunctionReturn: """Filter metadata in the given pandas DataFrame with a query string and return the strain names that pass the filter. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name query : str Query string for the dataframe. column_types : str Dict mapping of data type Examples -------- >>> metadata = pd.DataFrame([{"region": "Africa"}, {"region": "Europe"}], index=["strain1", "strain2"]) >>> filter_by_query(metadata, "region == 'Africa'") {'strain1'} >>> filter_by_query(metadata, "region == 'North America'") set() """ # Create a copy to prevent modification of the original DataFrame. metadata_copy = metadata.copy() if column_types is None: column_types = {} # Set columns for type conversion. variables = extract_variables(query) if variables is not None: columns = variables.intersection(metadata_copy.columns) else: # Column extraction failed. Apply type conversion to all columns. columns = metadata_copy.columns # If a type is not explicitly provided, try automatic conversion. for column in columns: column_types.setdefault(column, 'auto') # Convert data types before applying the query. # NOTE: This can behave differently between different chunks of metadata, # but it's the best we can do. for column, dtype in column_types.items(): if dtype == 'auto': # Try numeric conversion followed by boolean conversion. try: # pd.to_numeric supports nullable numeric columns unlike pd.read_csv's # built-in data type inference. metadata_copy[column] = pd.to_numeric(metadata_copy[column], errors='raise') except: try: metadata_copy[column] = metadata_copy[column].map(_string_to_boolean) except ValueError: # If both conversions fail, column values are preserved as strings. pass elif dtype == 'int': try: metadata_copy[column] = pd.to_numeric(metadata_copy[column], errors='raise', downcast='integer') except ValueError as e: raise AugurError(f"Failed to convert value in column {column!r} to int. {e}") elif dtype == 'float': try: metadata_copy[column] = pd.to_numeric(metadata_copy[column], errors='raise', downcast='float') except ValueError as e: raise AugurError(f"Failed to convert value in column {column!r} to float. {e}") elif dtype == 'bool': try: metadata_copy[column] = metadata_copy[column].map(_string_to_boolean) except ValueError as e: raise AugurError(f"Failed to convert value in column {column!r} to bool. {e}") elif dtype == 'str': metadata_copy[column] = metadata_copy[column].astype('str', errors='ignore') try: return set(metadata_copy.query(query).index.values) except Exception as e: if isinstance(e, PandasUndefinedVariableError): raise AugurError(f"Query contains a column that does not exist in metadata.") from e raise AugurError(f"Internal Pandas error when applying query:\n\t{e}\nEnsure the syntax is valid per .") from e def _string_to_boolean(s: str): """Convert a string to an optional boolean value. Raises ValueError if it cannot be converted. """ if s.lower() == 'true': return True elif s.lower() == 'false': return False elif s == '': return None raise ValueError(f"Unable to convert {s!r} to a boolean value.") def filter_by_ambiguous_date(metadata, date_column, ambiguity) -> FilterFunctionReturn: """Filter metadata in the given pandas DataFrame where values in the given date column have a given level of ambiguity. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name date_column : str Column in the dataframe with dates. ambiguity : str Level of date ambiguity to filter metadata by Examples -------- >>> metadata = pd.DataFrame([{"region": "Africa", "date": "2020-01-XX"}, {"region": "Europe", "date": "2020-01-02"}], index=["strain1", "strain2"]) >>> filter_by_ambiguous_date(metadata, date_column="date", ambiguity="any") {'strain2'} >>> sorted(filter_by_ambiguous_date(metadata, date_column="date", ambiguity="month")) ['strain1', 'strain2'] If the requested date column does not exist, we quietly skip this filter. >>> sorted(filter_by_ambiguous_date(metadata, date_column="missing_column", ambiguity="any")) ['strain1', 'strain2'] """ if date_column in metadata.columns: date_is_ambiguous = metadata[date_column].apply( lambda date: is_date_ambiguous(date, ambiguity) ) filtered = set(metadata[~date_is_ambiguous].index.values) else: filtered = set(metadata.index.values) return filtered def skip_group_by_with_ambiguous_year(metadata, date_column) -> FilterFunctionReturn: """Alias to filter_by_ambiguous_date for year. This is to have a named function available for the filter reason.""" return filter_by_ambiguous_date(metadata, date_column, ambiguity="year") def skip_group_by_with_ambiguous_month(metadata, date_column) -> FilterFunctionReturn: """Alias to filter_by_ambiguous_date for month. This is to have a named function available for the filter reason.""" return filter_by_ambiguous_date(metadata, date_column, ambiguity="month") def skip_group_by_with_ambiguous_day(metadata, date_column) -> FilterFunctionReturn: """Alias to filter_by_ambiguous_date for day. This is to have a named function available for the filter reason.""" return filter_by_ambiguous_date(metadata, date_column, ambiguity="day") def filter_by_min_date(metadata, date_column, min_date) -> FilterFunctionReturn: """Filter metadata by minimum date. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name date_column : str Column in the dataframe with dates. min_date : float Minimum date Examples -------- >>> from augur.dates import numeric_date >>> metadata = pd.DataFrame([{"region": "Africa", "date": "2020-01-01"}, {"region": "Europe", "date": "2020-01-02"}], index=["strain1", "strain2"]) >>> filter_by_min_date(metadata, date_column="date", min_date=numeric_date("2020-01-02")) {'strain2'} If the requested date column does not exist, we quietly skip this filter. >>> sorted(filter_by_min_date(metadata, date_column="missing_column", min_date=numeric_date("2020-01-02"))) ['strain1', 'strain2'] """ strains = set(metadata.index.values) # Skip this filter if the date column does not exist. if date_column not in metadata.columns: return strains dates = get_numerical_dates(metadata, date_col=date_column, fmt="%Y-%m-%d") filtered = {s for s in strains if (dates[s] is not None and (np.isscalar(dates[s]) or all(dates[s])) and np.max(dates[s]) >= min_date)} return filtered def filter_by_max_date(metadata, date_column, max_date) -> FilterFunctionReturn: """Filter metadata by maximum date. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name date_column : str Column in the dataframe with dates. max_date : float Maximum date Examples -------- >>> from augur.dates import numeric_date >>> metadata = pd.DataFrame([{"region": "Africa", "date": "2020-01-01"}, {"region": "Europe", "date": "2020-01-02"}], index=["strain1", "strain2"]) >>> filter_by_max_date(metadata, date_column="date", max_date=numeric_date("2020-01-01")) {'strain1'} If the requested date column does not exist, we quietly skip this filter. >>> sorted(filter_by_max_date(metadata, date_column="missing_column", max_date=numeric_date("2020-01-01"))) ['strain1', 'strain2'] """ strains = set(metadata.index.values) # Skip this filter if the date column does not exist. if date_column not in metadata.columns: return strains dates = get_numerical_dates(metadata, date_col=date_column, fmt="%Y-%m-%d") filtered = {s for s in strains if (dates[s] is not None and (np.isscalar(dates[s]) or all(dates[s])) and np.min(dates[s]) <= max_date)} return filtered def filter_by_sequence_index(metadata, sequence_index) -> FilterFunctionReturn: """Filter metadata by presence of corresponding entries in a given sequence index. This filter effectively intersects the strain ids in the metadata and sequence index. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name sequence_index : pandas.DataFrame Sequence index Examples -------- >>> metadata = pd.DataFrame([{"region": "Africa", "date": "2020-01-01"}, {"region": "Europe", "date": "2020-01-02"}], index=["strain1", "strain2"]) >>> sequence_index = pd.DataFrame([{"strain": "strain1", "ACGT": 28000}]).set_index("strain") >>> filter_by_sequence_index(metadata, sequence_index) {'strain1'} """ metadata_strains = set(metadata.index.values) sequence_index_strains = set(sequence_index.index.values) return metadata_strains & sequence_index_strains def filter_by_sequence_length(metadata, sequence_index, min_length) -> FilterFunctionReturn: """Filter metadata by sequence length from a given sequence index. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name sequence_index : pandas.DataFrame Sequence index min_length : int Minimum number of standard nucleotide characters (A, C, G, or T) in each sequence Examples -------- >>> metadata = pd.DataFrame([{"region": "Africa", "date": "2020-01-01"}, {"region": "Europe", "date": "2020-01-02"}], index=["strain1", "strain2"]) >>> sequence_index = pd.DataFrame([{"strain": "strain1", "A": 7000, "C": 7000, "G": 7000, "T": 7000}, {"strain": "strain2", "A": 6500, "C": 6500, "G": 6500, "T": 6500}]).set_index("strain") >>> filter_by_sequence_length(metadata, sequence_index, min_length=27000) {'strain1'} It is possible for the sequence index to be missing strains present in the metadata. >>> sequence_index = pd.DataFrame([{"strain": "strain3", "A": 7000, "C": 7000, "G": 7000, "T": 7000}, {"strain": "strain2", "A": 6500, "C": 6500, "G": 6500, "T": 6500}]).set_index("strain") >>> filter_by_sequence_length(metadata, sequence_index, min_length=27000) set() """ strains = set(metadata.index.values) filtered_sequence_index = sequence_index.loc[ sequence_index.index.intersection(strains) ] filtered_sequence_index["ACGT"] = filtered_sequence_index.loc[:, ["A", "C", "G", "T"]].sum(axis=1) return set(filtered_sequence_index[filtered_sequence_index["ACGT"] >= min_length].index.values) def filter_by_non_nucleotide(metadata, sequence_index) -> FilterFunctionReturn: """Filter metadata for strains with invalid nucleotide content. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name sequence_index : pandas.DataFrame Sequence index Examples -------- >>> metadata = pd.DataFrame([{"region": "Africa", "date": "2020-01-01"}, {"region": "Europe", "date": "2020-01-02"}], index=["strain1", "strain2"]) >>> sequence_index = pd.DataFrame([{"strain": "strain1", "invalid_nucleotides": 0}, {"strain": "strain2", "invalid_nucleotides": 1}]).set_index("strain") >>> filter_by_non_nucleotide(metadata, sequence_index) {'strain1'} """ strains = set(metadata.index.values) filtered_sequence_index = sequence_index.loc[ sequence_index.index.intersection(strains) ] no_invalid_nucleotides = filtered_sequence_index["invalid_nucleotides"] == 0 return set(filtered_sequence_index[no_invalid_nucleotides].index.values) def force_include_strains(metadata, include_file) -> FilterFunctionReturn: """Include strains in the given text file from the given metadata. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name include_file : str Filename with strain names to include from the given metadata Examples -------- >>> import os >>> from tempfile import NamedTemporaryFile >>> metadata = pd.DataFrame([{"region": "Africa"}, {"region": "Europe"}], index=["strain1", "strain2"]) >>> with NamedTemporaryFile(delete=False) as include_file: ... characters_written = include_file.write(b'strain1') >>> force_include_strains(metadata, include_file.name) {'strain1'} >>> os.unlink(include_file.name) """ included_strains = read_strains(include_file) return set(metadata.index.values) & included_strains def force_include_where(metadata, include_where) -> FilterFunctionReturn: """Include all strains from the given metadata that match the given query. Unlike pandas query syntax, inclusion queries should follow the pattern of `"property=value"` or `"property!=value"`. Additionally, this filter treats all values like lowercase strings, so we convert all values to strings first and then lowercase them before testing the given query. Parameters ---------- metadata : pandas.DataFrame Metadata indexed by strain name include_where : str Filter query used to include strains Examples -------- >>> metadata = pd.DataFrame([{"region": "Africa"}, {"region": "Europe"}], index=["strain1", "strain2"]) >>> force_include_where(metadata, "region!=Europe") {'strain1'} >>> force_include_where(metadata, "region=Europe") {'strain2'} >>> force_include_where(metadata, "region=europe") {'strain2'} If the column referenced in the given query does not exist, skip the filter. >>> force_include_where(metadata, "missing_column=value") set() """ column, op, value = parse_filter_query(include_where) if column in metadata.columns: # Apply a test operator (equality or inequality) to values from the # column in the given query. This produces an array of boolean values we # can index with. included_index = op( metadata[column].astype(str).str.lower(), value.lower() ) included = set(metadata[included_index].index.values) else: # Skip the inclusion filter if the requested column does not exist. included = set() return included def construct_filters(args, sequence_index) -> Tuple[List[FilterOption], List[FilterOption]]: """Construct lists of filters and inclusion criteria based on user-provided arguments. Parameters ---------- args : argparse.Namespace Command line arguments provided by the user. sequence_index : pandas.DataFrame Sequence index for the provided arguments. """ exclude_by: List[FilterOption] = [] include_by: List[FilterOption] = [] # Force include sequences specified in file(s). if args.include: # Collect the union of all given strains to include. for include_file in args.include: include_by.append(( force_include_strains, { "include_file": include_file, } )) # Add sequences with particular metadata attributes. if args.include_where: for include_where in args.include_where: include_by.append(( force_include_where, { "include_where": include_where, } )) # Exclude all strains by default. if args.exclude_all: exclude_by.append((filter_by_exclude_all, {})) # Filter by sequence index. if sequence_index is not None: exclude_by.append(( filter_by_sequence_index, { "sequence_index": sequence_index, }, )) # Remove strains explicitly excluded by name. if args.exclude: for exclude_file in args.exclude: exclude_by.append(( filter_by_exclude, { "exclude_file": exclude_file, } )) # Exclude strain my metadata field like 'host=camel'. if args.exclude_where: for exclude_where in args.exclude_where: exclude_by.append(( filter_by_exclude_where, {"exclude_where": exclude_where} )) # Exclude strains by metadata, using pandas querying. if args.query: kwargs = {"query": args.query} if args.query_columns: kwargs["column_types"] = {column: dtype for column, dtype in args.query_columns} exclude_by.append(( filter_by_query, kwargs )) # Filter by ambiguous dates. if args.exclude_ambiguous_dates_by: exclude_by.append(( filter_by_ambiguous_date, { "date_column": METADATA_DATE_COLUMN, "ambiguity": args.exclude_ambiguous_dates_by, } )) # Filter by min/max date. if args.min_date: exclude_by.append(( filter_by_min_date, { "min_date": args.min_date, "date_column": METADATA_DATE_COLUMN, } )) if args.max_date: exclude_by.append(( filter_by_max_date, { "max_date": args.max_date, "date_column": METADATA_DATE_COLUMN, } )) # Filter by sequence length. if args.min_length: # Skip VCF files and warn the user that the min length filter does not # make sense for VCFs. is_vcf = filename_is_vcf(args.sequences) if is_vcf: #doesn't make sense for VCF, ignore. print_err("WARNING: Cannot use min_length for VCF files. Ignoring...") else: exclude_by.append(( filter_by_sequence_length, { "sequence_index": sequence_index, "min_length": args.min_length, } )) # Exclude sequences with non-nucleotide characters. if args.non_nucleotide: exclude_by.append(( filter_by_non_nucleotide, { "sequence_index": sequence_index, } )) if args.group_by: # The order in which these are applied later should be broad → specific # ambiguity (e.g. year then month), otherwise broad ambiguity will be # captured by specific ambiguity. if {constants.DATE_YEAR_COLUMN, constants.DATE_MONTH_COLUMN, constants.DATE_WEEK_COLUMN} & set(args.group_by): exclude_by.append(( skip_group_by_with_ambiguous_year, {"date_column": METADATA_DATE_COLUMN} )) if {constants.DATE_MONTH_COLUMN, constants.DATE_WEEK_COLUMN} & set(args.group_by): exclude_by.append(( skip_group_by_with_ambiguous_month, {"date_column": METADATA_DATE_COLUMN} )) if constants.DATE_WEEK_COLUMN in args.group_by: exclude_by.append(( skip_group_by_with_ambiguous_day, {"date_column": METADATA_DATE_COLUMN} )) return exclude_by, include_by def apply_filters(metadata, exclude_by: List[FilterOption], include_by: List[FilterOption]): """Apply a list of filters to exclude or force-include records from the given metadata and return the strains to keep, to exclude, and to force include. Parameters ---------- metadata : pandas.DataFrame Metadata to filter Returns ------- set : Strains to keep (those that passed all filters) list of dict : Strains to exclude along with the function that filtered them and the arguments used to run the function. list of dict : Strains to force-include along with the function that filtered them and the arguments used to run the function. For example, filter data by minimum date, but force the include of strains from Africa. Examples -------- >>> from augur.dates import numeric_date >>> metadata = pd.DataFrame([{"region": "Africa", "date": "2020-01-01"}, {"region": "Europe", "date": "2020-10-02"}, {"region": "North America", "date": "2020-01-01"}], index=["strain1", "strain2", "strain3"]) >>> exclude_by = [(filter_by_min_date, {"date_column": "date", "min_date": numeric_date("2020-04-01")})] >>> include_by = [(force_include_where, {"include_where": "region=Africa"})] >>> strains_to_keep, strains_to_exclude, strains_to_include = apply_filters(metadata, exclude_by, include_by) >>> strains_to_keep {'strain2'} >>> sorted(strains_to_exclude, key=lambda record: record["strain"]) [{'strain': 'strain1', 'filter': 'filter_by_min_date', 'kwargs': '[["date_column", "date"], ["min_date", 2020.25]]'}, {'strain': 'strain3', 'filter': 'filter_by_min_date', 'kwargs': '[["date_column", "date"], ["min_date", 2020.25]]'}] >>> strains_to_include [{'strain': 'strain1', 'filter': 'force_include_where', 'kwargs': '[["include_where", "region=Africa"]]'}] We also want to filter by characteristics of the sequence data that we've annotated in a sequence index. >>> sequence_index = pd.DataFrame([{"strain": "strain1", "A": 7000, "C": 7000, "G": 7000, "T": 7000}, {"strain": "strain2", "A": 6500, "C": 6500, "G": 6500, "T": 6500}, {"strain": "strain3", "A": 1250, "C": 1250, "G": 1250, "T": 1250}]).set_index("strain") >>> exclude_by = [(filter_by_sequence_length, {"sequence_index": sequence_index, "min_length": 27000})] >>> include_by = [(force_include_where, {"include_where": "region=Europe"})] >>> strains_to_keep, strains_to_exclude, strains_to_include = apply_filters(metadata, exclude_by, include_by) >>> strains_to_keep {'strain1'} >>> sorted(strains_to_exclude, key=lambda record: record["strain"]) [{'strain': 'strain2', 'filter': 'filter_by_sequence_length', 'kwargs': '[["min_length", 27000]]'}, {'strain': 'strain3', 'filter': 'filter_by_sequence_length', 'kwargs': '[["min_length", 27000]]'}] >>> strains_to_include [{'strain': 'strain2', 'filter': 'force_include_where', 'kwargs': '[["include_where", "region=Europe"]]'}] """ strains_to_keep = set(metadata.index.values) strains_to_filter = [] strains_to_force_include = [] distinct_strains_to_force_include: Set = set() # Track strains that should be included regardless of filters. for include_function, include_kwargs in include_by: passed = metadata.pipe( include_function, **include_kwargs, ) distinct_strains_to_force_include = distinct_strains_to_force_include | passed # Track the reason why strains were included. if len(passed) > 0: include_name = include_function.__name__ include_kwargs_str = _filter_kwargs_to_str(include_kwargs) for strain in passed: strains_to_force_include.append({ "strain": strain, "filter": include_name, "kwargs": include_kwargs_str, }) for filter_function, filter_kwargs in exclude_by: # Apply the current function with its given arguments. Each function # returns a set of strains that passed the corresponding filter. passed = metadata.pipe( filter_function, **filter_kwargs, ) # Track the strains that failed this filter, so we can explain why later # on and update the list of strains to keep to intersect with the # strains that passed. failed = strains_to_keep - passed strains_to_keep = (strains_to_keep & passed) # Track the reason each strain was filtered for downstream reporting. if len(failed) > 0: # Use a human-readable name for each filter when reporting why a strain # was excluded. filter_name = filter_function.__name__ filter_kwargs_str = _filter_kwargs_to_str(filter_kwargs) for strain in failed: strains_to_filter.append({ "strain": strain, "filter": filter_name, "kwargs": filter_kwargs_str, }) # Stop applying filters if no strains remain. if len(strains_to_keep) == 0: break return strains_to_keep, strains_to_filter, strains_to_force_include def _filter_kwargs_to_str(kwargs: FilterFunctionKwargs): """Convert a dictionary of kwargs to a JSON string for downstream reporting. This structured string can be converted back into a Python data structure later for more sophisticated reporting by specific kwargs. This function excludes data types from arguments like pandas DataFrames and also converts floating point numbers to a fixed precision for better readability and reproducibility. Parameters ---------- kwargs : dict Dictionary of kwargs passed to a given filter function. Returns ------- str : String representation of the kwargs for reporting. Examples -------- >>> from augur.dates import numeric_date >>> from augur.filter.include_exclude_rules import filter_by_sequence_length, filter_by_min_date >>> sequence_index = pd.DataFrame([{"strain": "strain1", "ACGT": 28000}, {"strain": "strain2", "ACGT": 26000}, {"strain": "strain3", "ACGT": 5000}]).set_index("strain") >>> exclude_by = [(filter_by_sequence_length, {"sequence_index": sequence_index, "min_length": 27000})] >>> _filter_kwargs_to_str(exclude_by[0][1]) '[["min_length", 27000]]' >>> exclude_by = [(filter_by_min_date, {"date_column": "date", "min_date": numeric_date("2020-03-01")})] >>> _filter_kwargs_to_str(exclude_by[0][1]) '[["date_column", "date"], ["min_date", 2020.17]]' """ # Sort keys prior to processing to guarantee the same output order # regardless of the input order. sorted_keys = sorted(kwargs.keys()) kwarg_list = [] for key in sorted_keys: value = kwargs[key] # Handle special cases for data types that we want to represent # differently from their defaults or not at all. if isinstance(value, pd.DataFrame): continue elif isinstance(value, float): value = round(value, 2) kwarg_list.append((key, value)) return json.dumps(kwarg_list) def extract_variables(pandas_query: str): """Try extracting all variable names used in a pandas query string. If successful, return the variable names as a set. Otherwise, nothing is returned. Examples -------- >>> extract_variables("var1 == 'value'") {'var1'} >>> sorted(extract_variables("var1 == 'value' & var2 == 10")) ['var1', 'var2'] >>> extract_variables("var1.str.startswith('prefix')") {'var1'} >>> extract_variables("this query is invalid") Backtick quoting is also supported. >>> extract_variables("`include me` == 'but not `me`'") {'include me'} >>> extract_variables("`include me once` == 'a' or `include me once` == 'b'") {'include me once'} """ # Since Pandas's query grammar is mostly a subset of Python's, which uses the # ast stdlib under the hood, we can try to parse queries with that as well. # Errors may arise from invalid query syntax or any unhandled Pandas-specific # syntax. In those cases, don't return anything. try: # Replace the backtick quoting that is Pandas-specific syntax. modified_query, replacements = _replace_backtick_quoting(pandas_query) variables = set(node.id for node in ast.walk(ast.parse(modified_query)) if isinstance(node, ast.Name)) for original_name, generated_name in replacements.items(): if generated_name in variables: variables.remove(generated_name) variables.add(original_name) return variables except: return None def _replace_backtick_quoting(pandas_query: str): """Replace backtick-quoted values with a generated value. The generated value can be translated as a valid name (i.e. no spaces or special characters). Return the modified query and a dict mapping from the original to generated value. """ pattern = r"`([^`]+)`" replacements: Dict[str, str] = {} name_counter = 1 def replace(match: re.Match): nonlocal replacements nonlocal name_counter original_value = match.group(1) if original_value not in replacements: replacements[original_value] = f'__augur_filter_{name_counter}' name_counter += 1 return replacements[original_value] modified_query = re.sub(pattern, replace, pandas_query) return modified_query, replacements augur-24.2.2/augur/filter/io.py000066400000000000000000000143661456376326500163500ustar00rootroot00000000000000import argparse import csv from argparse import Namespace import os import re from textwrap import dedent from typing import Sequence, Set import numpy as np from collections import defaultdict from xopen import xopen from augur.errors import AugurError from augur.io.file import open_file from augur.io.metadata import Metadata, METADATA_DATE_COLUMN from augur.io.print import print_err from .constants import GROUP_BY_GENERATED_COLUMNS from .include_exclude_rules import extract_variables, parse_filter_query def get_useful_metadata_columns(args: Namespace, id_column: str, all_columns: Sequence[str]): """Return a list of column names that are used in augur filter. This allows reading only the necessary columns. """ # Start with just the ID column. columns = {id_column} # Add the date column if it is used. if (args.exclude_ambiguous_dates_by or args.min_date or args.max_date or (args.group_by and GROUP_BY_GENERATED_COLUMNS.intersection(args.group_by))): columns.add(METADATA_DATE_COLUMN) if args.group_by: group_by_set = set(args.group_by) requested_generated_columns = group_by_set & GROUP_BY_GENERATED_COLUMNS # Add columns used for grouping. columns.update(group_by_set - requested_generated_columns) # Show warning for ignored columns. ignored_columns = requested_generated_columns.intersection(set(all_columns)) for col in sorted(ignored_columns): print_err(f"WARNING: `--group-by {col}` uses a generated {col} value from the {METADATA_DATE_COLUMN!r} column. The custom '{col}' column in the metadata is ignored for grouping purposes.") # Add columns used in exclude queries. if args.exclude_where: for query in args.exclude_where: column, op, value = parse_filter_query(query) columns.add(column) # Add columns used in include queries. if args.include_where: for query in args.include_where: column, op, value = parse_filter_query(query) columns.add(column) # Add columns used in Pandas queries. if args.query: if args.query_columns: # Use column names explicitly specified by the user. for column, dtype in args.query_columns: columns.add(column) # Attempt to automatically extract columns from the query. variables = extract_variables(args.query) if variables is None and not args.query_columns: print_err(dedent(f"""\ WARNING: Could not infer columns from the pandas query. Reading all metadata columns, which may impact execution time. If the query is valid, please open a new issue: and add the query to the description: {args.query}""")) columns.update(all_columns) else: columns.update(variables) return list(columns) def read_priority_scores(fname): def constant_factory(value): return lambda: value try: with open_file(fname) as pfile: return defaultdict(constant_factory(-np.inf), { elems[0]: float(elems[1]) for elems in (line.strip().split('\t') if '\t' in line else line.strip().split() for line in pfile.readlines()) }) except Exception: raise AugurError(f"missing or malformed priority scores file {fname}") def write_metadata_based_outputs(input_metadata_path: str, delimiters: Sequence[str], id_columns: Sequence[str], output_metadata_path: str, output_strains_path: str, ids_to_write: Set[str]): """ Write output metadata and/or strains file given input metadata information and a set of IDs to write. """ input_metadata = Metadata(input_metadata_path, delimiters, id_columns) # Handle all outputs with one pass of metadata. This requires using # conditionals both outside of and inside the loop through metadata rows. # Make these conditionally set variables available at this scope. output_metadata_handle = None output_metadata = None output_strains = None # Set up output streams. if output_metadata_path: output_metadata_handle = xopen(output_metadata_path, "w") output_metadata = csv.DictWriter(output_metadata_handle, fieldnames=input_metadata.columns, delimiter="\t", lineterminator=os.linesep) output_metadata.writeheader() if output_strains_path: output_strains = open(output_strains_path, "w") # Write outputs based on rows in the original metadata. for row in input_metadata.rows(): row_id = row[input_metadata.id_column] if row_id in ids_to_write: if output_metadata: output_metadata.writerow(row) if output_strains: output_strains.write(row_id + '\n') # Close file handles. if output_metadata_handle: output_metadata_handle.close() if output_strains: output_strains.close() # These are the types accepted in the following function. ACCEPTED_TYPES = {'int', 'float', 'bool', 'str'} def column_type_pair(input: str): """Get a 2-tuple for column name to type. Intended to be used as the argument type converter for argparse options that take type maps in a 'column:type' format. """ match = re.match(f"^(.+?):({'|'.join(ACCEPTED_TYPES)})$", input) if not match: raise argparse.ArgumentTypeError(f"Column data types must be in the format 'column:type', where type is one of ({','.join(ACCEPTED_TYPES)}).") column = match[1] dtype = match[2] return (column, dtype) def cleanup_outputs(args): """Remove output files. Useful when terminating midway through a loop of metadata chunks.""" if args.output: _try_remove(args.output) if args.output_metadata: _try_remove(args.output_metadata) if args.output_strains: _try_remove(args.output_strains) if args.output_log: _try_remove(args.output_log) def _try_remove(filepath): """Remove a file if it exists.""" try: os.remove(filepath) except FileNotFoundError: pass augur-24.2.2/augur/filter/subsample.py000066400000000000000000000430531456376326500177270ustar00rootroot00000000000000import heapq import itertools import uuid import numpy as np import pandas as pd from typing import Collection from augur.dates import get_iso_year_week from augur.errors import AugurError from augur.io.metadata import METADATA_DATE_COLUMN from augur.io.print import print_err from . import constants def get_groups_for_subsampling(strains, metadata, group_by=None): """Return a list of groups for each given strain based on the corresponding metadata and group by column. Parameters ---------- strains : list A list of strains to get groups for. metadata : pandas.DataFrame Metadata to inspect for the given strains. group_by : list A list of metadata (or generated) columns to group records by. Returns ------- dict : A mapping of strain names to tuples corresponding to the values of the strain's group. Examples -------- >>> strains = ["strain1", "strain2"] >>> metadata = pd.DataFrame([{"strain": "strain1", "date": "2020-01-01", "region": "Africa"}, {"strain": "strain2", "date": "2020-02-01", "region": "Europe"}]).set_index("strain") >>> group_by = ["region"] >>> group_by_strain = get_groups_for_subsampling(strains, metadata, group_by) >>> group_by_strain {'strain1': ('Africa',), 'strain2': ('Europe',)} If we group by year or month, these groups are generated from the date string. >>> group_by = ["year", "month"] >>> group_by_strain = get_groups_for_subsampling(strains, metadata, group_by) >>> group_by_strain {'strain1': (2020, (2020, 1)), 'strain2': (2020, (2020, 2))} If we omit the grouping columns, the result will group by a dummy column. >>> group_by_strain = get_groups_for_subsampling(strains, metadata) >>> group_by_strain {'strain1': ('_dummy',), 'strain2': ('_dummy',)} If we try to group by columns that don't exist, we get an error. >>> group_by = ["missing_column"] >>> get_groups_for_subsampling(strains, metadata, group_by) Traceback (most recent call last): ... augur.errors.AugurError: The specified group-by categories (['missing_column']) were not found. If we try to group by some columns that exist and some that don't, we allow grouping to continue and print a warning message to stderr. >>> group_by = ["year", "month", "missing_column"] >>> group_by_strain = get_groups_for_subsampling(strains, metadata, group_by) >>> group_by_strain {'strain1': (2020, (2020, 1), 'unknown'), 'strain2': (2020, (2020, 2), 'unknown')} We can group metadata without any non-ID columns. >>> metadata = pd.DataFrame([{"strain": "strain1"}, {"strain": "strain2"}]).set_index("strain") >>> get_groups_for_subsampling(strains, metadata, group_by=('_dummy',)) {'strain1': ('_dummy',), 'strain2': ('_dummy',)} """ metadata = metadata.loc[list(strains)] group_by_strain = {} if len(metadata) == 0: return group_by_strain if not group_by or group_by == ('_dummy',): group_by_strain = {strain: ('_dummy',) for strain in strains} return group_by_strain group_by_set = set(group_by) generated_columns_requested = constants.GROUP_BY_GENERATED_COLUMNS & group_by_set # If we could not find any requested categories, we cannot complete subsampling. if METADATA_DATE_COLUMN not in metadata and group_by_set <= constants.GROUP_BY_GENERATED_COLUMNS: raise AugurError(f"The specified group-by categories ({group_by}) were not found. Note that using any of {sorted(constants.GROUP_BY_GENERATED_COLUMNS)} requires a column called {METADATA_DATE_COLUMN!r}.") if not group_by_set & (set(metadata.columns) | constants.GROUP_BY_GENERATED_COLUMNS): raise AugurError(f"The specified group-by categories ({group_by}) were not found.") # Warn/error based on other columns grouped with week. if constants.DATE_WEEK_COLUMN in group_by_set: if constants.DATE_YEAR_COLUMN in group_by_set: print_err(f"WARNING: {constants.DATE_YEAR_COLUMN!r} grouping will be ignored since {constants.DATE_WEEK_COLUMN!r} includes ISO year.") group_by.remove(constants.DATE_YEAR_COLUMN) group_by_set.remove(constants.DATE_YEAR_COLUMN) generated_columns_requested.remove(constants.DATE_YEAR_COLUMN) if constants.DATE_MONTH_COLUMN in group_by_set: raise AugurError(f"{constants.DATE_MONTH_COLUMN!r} and {constants.DATE_WEEK_COLUMN!r} grouping cannot be used together.") if generated_columns_requested: if METADATA_DATE_COLUMN not in metadata: # Set generated columns to 'unknown'. print_err(f"WARNING: A {METADATA_DATE_COLUMN!r} column could not be found to group-by {sorted(generated_columns_requested)}.") print_err(f"Filtering by group may behave differently than expected!") df_dates = pd.DataFrame({col: 'unknown' for col in constants.GROUP_BY_GENERATED_COLUMNS}, index=metadata.index) metadata = pd.concat([metadata, df_dates], axis=1) else: # Create a DataFrame with year/month/day columns as nullable ints. # These columns are prefixed to note temporary usage. They are used # to generate other columns, and will be discarded at the end. temp_prefix = str(uuid.uuid4()) temp_date_cols = [f'{temp_prefix}year', f'{temp_prefix}month', f'{temp_prefix}day'] df_dates = metadata[METADATA_DATE_COLUMN].str.split('-', n=2, expand=True) df_dates = df_dates.set_axis(temp_date_cols[:len(df_dates.columns)], axis=1) missing_date_cols = set(temp_date_cols) - set(df_dates.columns) for col in missing_date_cols: df_dates[col] = pd.NA for col in temp_date_cols: df_dates[col] = pd.to_numeric(df_dates[col], errors='coerce').astype(pd.Int64Dtype()) # Extend metadata with generated date columns # Drop the date column since it should not be used for grouping. metadata = pd.concat([metadata.drop(METADATA_DATE_COLUMN, axis=1), df_dates], axis=1) # Check again if metadata is empty after dropping ambiguous dates. if metadata.empty: return group_by_strain # Generate columns. if constants.DATE_YEAR_COLUMN in generated_columns_requested: metadata[constants.DATE_YEAR_COLUMN] = metadata[f'{temp_prefix}year'] if constants.DATE_MONTH_COLUMN in generated_columns_requested: metadata[constants.DATE_MONTH_COLUMN] = list(zip( metadata[f'{temp_prefix}year'], metadata[f'{temp_prefix}month'] )) if constants.DATE_WEEK_COLUMN in generated_columns_requested: # Note that week = (year, week) from the date.isocalendar(). # Do not combine the raw year with the ISO week number alone, # since raw year ≠ ISO year. metadata[constants.DATE_WEEK_COLUMN] = metadata.apply(lambda row: get_iso_year_week( row[f'{temp_prefix}year'], row[f'{temp_prefix}month'], row[f'{temp_prefix}day'] ), axis=1 ) # Drop the internally used columns. for col in temp_date_cols: metadata.drop(col, axis=1, inplace=True) unknown_groups = group_by_set - set(metadata.columns) if unknown_groups: print_err(f"WARNING: Some of the specified group-by categories couldn't be found: {', '.join(unknown_groups)}") print_err("Filtering by group may behave differently than expected!") for group in unknown_groups: metadata[group] = 'unknown' # Finally, determine groups. group_by_strain = dict(zip(metadata.index, metadata[group_by].apply(tuple, axis=1))) return group_by_strain class PriorityQueue: """A priority queue implementation that automatically replaces lower priority items in the heap with incoming higher priority items. Examples -------- Add a single record to a heap with a maximum of 2 records. >>> queue = PriorityQueue(max_size=2) >>> queue.add({"strain": "strain1"}, 0.5) 1 Add another record with a higher priority. The queue should be at its maximum size. >>> queue.add({"strain": "strain2"}, 1.0) 2 >>> queue.heap [(0.5, 0, {'strain': 'strain1'}), (1.0, 1, {'strain': 'strain2'})] >>> list(queue.get_items()) [{'strain': 'strain1'}, {'strain': 'strain2'}] Add a higher priority record that causes the queue to exceed its maximum size. The resulting queue should contain the two highest priority records after the lowest priority record is removed. >>> queue.add({"strain": "strain3"}, 2.0) 2 >>> list(queue.get_items()) [{'strain': 'strain2'}, {'strain': 'strain3'}] Add a record with the same priority as another record, forcing the duplicate to be resolved by removing the oldest entry. >>> queue.add({"strain": "strain4"}, 1.0) 2 >>> list(queue.get_items()) [{'strain': 'strain4'}, {'strain': 'strain3'}] """ def __init__(self, max_size): """Create a fixed size heap (priority queue) """ self.max_size = max_size self.heap = [] self.counter = itertools.count() def add(self, item, priority): """Add an item to the queue with a given priority. If adding the item causes the queue to exceed its maximum size, replace the lowest priority item with the given item. The queue stores items with an additional heap id value (a count) to resolve ties between items with equal priority (favoring the most recently added item). """ heap_id = next(self.counter) if len(self.heap) >= self.max_size: heapq.heappushpop(self.heap, (priority, heap_id, item)) else: heapq.heappush(self.heap, (priority, heap_id, item)) return len(self.heap) def get_items(self): """Return each item in the queue in order. Yields ------ Any Item stored in the queue. """ for priority, heap_id, item in self.heap: yield item def create_queues_by_group(groups, max_size, max_attempts=100, random_seed=None): """Create a dictionary of priority queues per group for the given maximum size. When the maximum size is fractional, probabilistically sample the maximum size from a Poisson distribution. Make at least the given number of maximum attempts to create queues for which the sum of their maximum sizes is greater than zero. Examples -------- Create queues for two groups with a fixed maximum size. >>> groups = ("2015", "2016") >>> queues = create_queues_by_group(groups, 2) >>> sum(queue.max_size for queue in queues.values()) 4 Create queues for two groups with a fractional maximum size. Their total max size should still be an integer value greater than zero. >>> seed = 314159 >>> queues = create_queues_by_group(groups, 0.1, random_seed=seed) >>> int(sum(queue.max_size for queue in queues.values())) > 0 True A subsequent run of this function with the same groups and random seed should produce the same queues and queue sizes. >>> more_queues = create_queues_by_group(groups, 0.1, random_seed=seed) >>> [queue.max_size for queue in queues.values()] == [queue.max_size for queue in more_queues.values()] True """ queues_by_group = {} total_max_size = 0 attempts = 0 if max_size < 1.0: random_generator = np.random.default_rng(random_seed) # For small fractional maximum sizes, it is possible to randomly select # maximum queue sizes that all equal zero. When this happens, filtering # fails unexpectedly. We make multiple attempts to create queues with # maximum sizes greater than zero for at least one queue. while total_max_size == 0 and attempts < max_attempts: for group in sorted(groups): if max_size < 1.0: queue_max_size = random_generator.poisson(max_size) else: queue_max_size = max_size queues_by_group[group] = PriorityQueue(queue_max_size) total_max_size = sum(queue.max_size for queue in queues_by_group.values()) attempts += 1 return queues_by_group def calculate_sequences_per_group(target_max_value, group_sizes, allow_probabilistic=True): """Calculate the number of sequences per group for a given maximum number of sequences to be returned and the number of sequences in each requested group. Optionally, allow the result to be probabilistic such that the mean result of a Poisson process achieves the calculated sequences per group for the given maximum. Parameters ---------- target_max_value : int Maximum number of sequences to return by subsampling at some calculated number of sequences per group for the given counts per group. group_sizes : list of int A list with the number of sequences in each requested group. allow_probabilistic : bool Whether to allow probabilistic subsampling when the number of groups exceeds the requested maximum. Raises ------ TooManyGroupsError When there are more groups than sequences per group and probabilistic subsampling is not allowed. Returns ------- int or float : Number of sequences per group. bool : Whether probabilistic subsampling was used. """ probabilistic_used = False try: sequences_per_group = _calculate_sequences_per_group( target_max_value, group_sizes, ) except TooManyGroupsError as error: if allow_probabilistic: print_err(f"WARNING: {error}") sequences_per_group = _calculate_fractional_sequences_per_group( target_max_value, group_sizes, ) probabilistic_used = True else: raise error return sequences_per_group, probabilistic_used class TooManyGroupsError(ValueError): def __init__(self, msg): self.msg = msg def __str__(self): return str(self.msg) def _calculate_total_sequences( hypothetical_spg: float, group_sizes: Collection[int], ) -> float: # calculate how many sequences we'd keep given a hypothetical spg. return sum( min(hypothetical_spg, group_count) for group_count in group_sizes ) def _calculate_sequences_per_group( target_max_value: int, group_sizes: Collection[int] ) -> int: """This is partially inspired by https://github.com/python/cpython/blob/3.8/Lib/bisect.py This should return the spg such that we don't exceed the requested number of samples. Parameters ---------- target_max_value : int the total number of sequences allowed across all groups group_sizes : Collection[int] the number of sequences in each group Returns ------- int maximum number of sequences allowed per group to meet the required maximum total sequences allowed Examples -------- >>> _calculate_sequences_per_group(4, [4, 2]) 2 >>> _calculate_sequences_per_group(2, [4, 2]) 1 >>> _calculate_sequences_per_group(1, [4, 2]) Traceback (most recent call last): ... augur.filter.subsample.TooManyGroupsError: Asked to provide at most 1 sequences, but there are 2 groups. """ if len(group_sizes) > target_max_value: # we have more groups than sequences we are allowed, which is an # error. raise TooManyGroupsError( "Asked to provide at most {} sequences, but there are {} " "groups.".format(target_max_value, len(group_sizes))) lo = 1 hi = target_max_value while hi - lo > 2: mid = (hi + lo) // 2 if _calculate_total_sequences(mid, group_sizes) <= target_max_value: lo = mid else: hi = mid if _calculate_total_sequences(hi, group_sizes) <= target_max_value: return int(hi) else: return int(lo) def _calculate_fractional_sequences_per_group( target_max_value: int, group_sizes: Collection[int] ) -> float: """Returns the fractional sequences per group for the given list of group sequences such that the total doesn't exceed the requested number of samples. Parameters ---------- target_max_value : int the total number of sequences allowed across all groups group_sizes : Collection[int] the number of sequences in each group Returns ------- float fractional maximum number of sequences allowed per group to meet the required maximum total sequences allowed Examples -------- >>> np.around(_calculate_fractional_sequences_per_group(4, [4, 2]), 4) 1.9375 >>> np.around(_calculate_fractional_sequences_per_group(2, [4, 2]), 4) 0.9688 Unlike the integer-based version of this function, the fractional version can accept a maximum number of sequences that exceeds the number of groups. In this case, the function returns a fraction that can be used downstream, for example with Poisson sampling. >>> np.around(_calculate_fractional_sequences_per_group(1, [4, 2]), 4) 0.4844 """ lo = 1e-5 hi = float(target_max_value) while (hi / lo) > 1.1: mid = (lo + hi) / 2 if _calculate_total_sequences(mid, group_sizes) <= target_max_value: lo = mid else: hi = mid return (lo + hi) / 2 augur-24.2.2/augur/filter/validate_arguments.py000066400000000000000000000032751456376326500216140ustar00rootroot00000000000000from augur.errors import AugurError from augur.io.vcf import is_vcf as filename_is_vcf SEQUENCE_ONLY_FILTERS = ( "min_length", "non_nucleotide", ) def validate_arguments(args): """Validate arguments. Parameters ---------- args : argparse.Namespace Parsed arguments from argparse """ # Don't allow sequence output when no sequence input is provided. if args.output and not args.sequences: raise AugurError("You need to provide sequences to output sequences.") # Confirm that at least one output was requested. if not any((args.output, args.output_metadata, args.output_strains)): raise AugurError("You need to select at least one output.") # Don't allow filtering on sequence-based information, if no sequences or # sequence index is provided. if not args.sequences and not args.sequence_index and any(getattr(args, arg) for arg in SEQUENCE_ONLY_FILTERS): raise AugurError("You need to provide a sequence index or sequences to filter on sequence-specific information.") # Set flags if VCF is_vcf = filename_is_vcf(args.sequences) # Confirm that vcftools is installed. if is_vcf: from shutil import which if which("vcftools") is None: raise AugurError("'vcftools' is not installed! This is required for VCF data. " "Please see the augur install instructions to install it.") # If user requested grouping, confirm that other required inputs are provided, too. if args.group_by and not any((args.sequences_per_group, args.subsample_max_sequences)): raise AugurError("You must specify a number of sequences per group or maximum sequences to subsample.") augur-24.2.2/augur/frequencies.py000066400000000000000000000325201456376326500167550ustar00rootroot00000000000000""" infer frequencies of mutations or clades """ import json, os, sys import numpy as np from Bio import Phylo, AlignIO from Bio.Align import MultipleSeqAlignment from .errors import AugurError from .frequency_estimators import get_pivots, alignment_frequencies, tree_frequencies from .frequency_estimators import AlignmentKdeFrequencies, TreeKdeFrequencies, TreeKdeFrequenciesError from .dates import numeric_date_type, SUPPORTED_DATE_HELP_TEXT, get_numerical_dates from .io.file import open_file from .io.metadata import DEFAULT_DELIMITERS, DEFAULT_ID_COLUMNS, METADATA_DATE_COLUMN, InvalidDelimiter, Metadata, read_metadata from .utils import write_json def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("frequencies", help=__doc__) # Shared arguments parser.add_argument('--method', choices=["diffusion", "kde"], required=True, help="method by which frequencies should be estimated") parser.add_argument('--metadata', type=str, required=True, metavar="FILE", help="metadata including dates for given samples") parser.add_argument('--metadata-delimiters', default=DEFAULT_DELIMITERS, nargs="+", help="delimiters to accept when reading a metadata file. Only one delimiter will be inferred.") parser.add_argument('--metadata-id-columns', default=DEFAULT_ID_COLUMNS, nargs="+", help="names of possible metadata columns containing identifier information, ordered by priority. Only one ID column will be inferred.") parser.add_argument('--regions', type=str, nargs='+', default=['global'], help="region to subsample to") parser.add_argument("--pivot-interval", type=int, default=3, help="number of units between pivots") parser.add_argument("--pivot-interval-units", type=str, default="months", choices=['months', 'weeks'], help="space pivots by months (default) or by weeks") parser.add_argument('--min-date', type=numeric_date_type, help=f"date to begin frequencies calculations; may be specified as: {SUPPORTED_DATE_HELP_TEXT}") parser.add_argument('--max-date', type=numeric_date_type, help=f"date to end frequencies calculations; may be specified as: {SUPPORTED_DATE_HELP_TEXT}") # Tree-specific arguments parser.add_argument('--tree', '-t', type=str, help="tree to estimate clade frequencies for") parser.add_argument("--include-internal-nodes", action="store_true", help="calculate frequencies for internal nodes as well as tips") # Alignment-specific arguments parser.add_argument('--alignments', type=str, nargs='+', help="alignments to estimate mutations frequencies for") parser.add_argument('--gene-names', nargs='+', type=str, help="names of the sequences in the alignment, same order assumed") parser.add_argument('--ignore-char', type=str, default='', help="character to be ignored in frequency calculations") parser.add_argument('--minimal-frequency', type=float, default=0.05, help="minimal all-time frequencies for a trajectory to be estimates") # KDE-specific arguments parser.add_argument("--narrow-bandwidth", type=float, default=1 / 12.0, help="the bandwidth for the narrow KDE") parser.add_argument("--wide-bandwidth", type=float, default=3 / 12.0, help="the bandwidth for the wide KDE") parser.add_argument("--proportion-wide", type=float, default=0.2, help="the proportion of the wide bandwidth to use in the KDE mixture model") parser.add_argument("--weights", help="a dictionary of key/value mappings in JSON format used to weight KDE tip frequencies") parser.add_argument("--weights-attribute", help="name of the attribute on each tip whose values map to the given weights dictionary") parser.add_argument("--censored", action="store_true", help="calculate censored frequencies at each pivot") # Diffusion frequency specific arguments parser.add_argument('--minimal-clade-size', type=int, default=0, help="minimal number of tips a clade must have for its diffusion frequencies to be reported") parser.add_argument('--minimal-clade-size-to-estimate', type=int, default=10, help="""minimal number of tips a clade must have for its diffusion frequencies to be estimated by the diffusion likelihood; all smaller clades will inherit frequencies from their parents""") parser.add_argument("--stiffness", type=float, default=10.0, help="parameter penalizing curvature of the frequency trajectory") parser.add_argument("--inertia", type=float, default=0.0, help="determines how frequencies continue " "in absense of data (inertia=0 -> go flat, inertia=1.0 -> continue current trend)") # Output arguments parser.add_argument('--output-format', default='auspice', choices=['auspice', 'nextflu'], help="format to export frequencies JSON depending on the viewing interface") parser.add_argument('--output', '-o', type=str, help='JSON file to save estimated frequencies to') return parser def format_frequencies(freq): return [round(x,6) for x in freq] def run(args): try: metadata_object = Metadata(args.metadata, args.metadata_delimiters, args.metadata_id_columns) except InvalidDelimiter: raise AugurError( f"Could not determine the delimiter of {args.metadata!r}. " f"Valid delimiters are: {args.metadata_delimiters!r}. " "This can be changed with --metadata-delimiters." ) columns_to_load = [metadata_object.id_column, METADATA_DATE_COLUMN] if args.weights_attribute: columns_to_load.append(args.weights_attribute) metadata = read_metadata( args.metadata, delimiters=[metadata_object.delimiter], columns=columns_to_load, id_columns=[metadata_object.id_column], dtype="string", ) dates = get_numerical_dates(metadata, fmt='%Y-%m-%d') stiffness = args.stiffness inertia = args.inertia # For KDE weights = None weights_attribute = None if args.method == "kde" and args.weights: # Load weights if they have been provided. with open_file(args.weights, "r") as fh: weights = json.load(fh) weights_attribute = args.weights_attribute if args.tree: tree = Phylo.read(args.tree, 'newick') tps = [] for tip in tree.get_terminals(): tip.attr = {"num_date": np.mean(dates[tip.name])} tps.append(tip.attr["num_date"]) if weights_attribute: # Annotate tip with weight attribute. tip.attr[weights_attribute] = metadata.loc[tip.name, weights_attribute] if args.method == "diffusion": # estimate tree frequencies pivots = get_pivots(tps, args.pivot_interval, args.min_date, args.max_date, args.pivot_interval_units) frequency_dict = {"pivots":format_frequencies(pivots)} frequency_dict["counts"] = {} for region in args.regions: # Omit strains sampled prior to the first pivot from frequency calculations. # (these tend to be reference strains included for phylogenetic context) if region=='global': node_filter_func = lambda node: node.attr["num_date"] >= pivots[0] else: node_filter_func = lambda node: (node.attr["region"] == region and node.attr["num_date"] >= pivots[0]) tree_freqs = tree_frequencies(tree, pivots, method='SLSQP', node_filter = node_filter_func, ws = max(2, tree.count_terminals()//10), stiffness = stiffness, inertia=inertia, min_clades=args.minimal_clade_size_to_estimate) tree_freqs.estimate_clade_frequencies() frequency_dict["counts"][region] = [int(x) for x in tree_freqs.counts] if args.output_format == "nextflu": # Export frequencies in nextflu-format by region and clade id. for clade_id, clade_frequencies in tree_freqs.frequencies.items(): frequency_dict["%s_clade:%d" % (region, clade_id)] = format_frequencies(clade_frequencies) else: # Export frequencies in auspice-format by strain name. for node in tree.find_clades(order='postorder'): if node.is_terminal(): node.tipcount=1 else: node.tipcount = np.sum([c.tipcount for c in node]) if (node.is_terminal() or args.include_internal_nodes) and node.tipcount>args.minimal_clade_size: if node.name not in frequency_dict: frequency_dict[node.name] = {} frequency_dict[node.name][region] = format_frequencies(tree_freqs.frequencies[node.clade]) elif args.method == "kde": if args.output_format == "nextflu": print("ERROR: nextflu format is not supported for KDE frequencies", file=sys.stderr) return 1 # Estimate frequencies. kde_frequencies = TreeKdeFrequencies( sigma_narrow=args.narrow_bandwidth, sigma_wide=args.wide_bandwidth, proportion_wide=args.proportion_wide, pivot_frequency=args.pivot_interval, start_date=args.min_date, end_date=args.max_date, pivot_interval_units=args.pivot_interval_units, weights=weights, weights_attribute=weights_attribute, include_internal_nodes=args.include_internal_nodes, censored=args.censored ) try: frequencies = kde_frequencies.estimate(tree) except TreeKdeFrequenciesError as e: print("ERROR: %s" % str(e), file=sys.stderr) return 1 # Export frequencies in auspice-format by strain name. frequency_dict = {"pivots": list(kde_frequencies.pivots)} for node_name in frequencies: frequency_dict[node_name] = { "frequencies": format_frequencies(frequencies[node_name]) } write_json(frequency_dict, args.output) print("tree frequencies written to", args.output, file=sys.stdout) elif args.alignments: frequencies = None for gene, fname in zip(args.gene_names, args.alignments): if not os.path.isfile(fname): print("ERROR: alignment file not found", file=sys.stderr) return 1 aln = MultipleSeqAlignment([seq for seq in AlignIO.read(fname, 'fasta') if not seq.name.startswith('NODE_')]) tps = np.array([np.mean(dates[seq.name]) for seq in aln]) if frequencies is None: pivots = get_pivots(tps, args.pivot_interval, args.min_date, args.max_date, args.pivot_interval_units) frequencies = {"pivots":format_frequencies(pivots)} if args.method == "kde": kde_frequencies = AlignmentKdeFrequencies( sigma_narrow=args.narrow_bandwidth, sigma_wide=args.wide_bandwidth, proportion_wide=args.proportion_wide, pivot_frequency=args.pivot_interval, start_date=args.min_date, end_date=args.max_date, pivot_interval_units=args.pivot_interval_units, weights=weights, weights_attribute=weights_attribute, include_internal_nodes=args.include_internal_nodes, censored=args.censored ) kde_frequencies.estimate( aln, tps ) for mutation, mutation_frequencies in kde_frequencies.frequencies.items(): position, state = mutation.split(":") frequencies["%s:%s%s" % (gene, position, state)] = format_frequencies(mutation_frequencies) else: freqs = alignment_frequencies(aln, tps, pivots, stiffness=stiffness, inertia=inertia, method='SLSQP', dtps=2.0) freqs.mutation_frequencies(min_freq = args.minimal_frequency, ignore_char=args.ignore_char) frequencies.update({"%s:%d%s" % (gene, pos+1, state): format_frequencies(mutation_frequencies) for (pos, state), mutation_frequencies in freqs.frequencies.items()}) frequencies["%s:counts" % gene] = [int(observations_per_pivot) for observations_per_pivot in freqs.counts] write_json(frequencies, args.output) print("mutation frequencies written to", args.output, file=sys.stdout) augur-24.2.2/augur/frequency_estimators.py000066400000000000000000001426411456376326500207250ustar00rootroot00000000000000# estimates clade frequencies from __future__ import division, print_function from collections import deque import datetime import isodate import numpy as np from scipy.interpolate import interp1d from scipy.stats import norm import sys from .dates import numeric_date debug = False log_thres = 10.0 class TreeKdeFrequenciesError(Exception): """Represents an error estimating KDE frequencies for a tree. """ pass def get_pivots(observations, pivot_interval, start_date=None, end_date=None, pivot_interval_units="months"): """Calculate pivots for a given list of floating point observation dates and interval between pivots. Start and end pivots will be based on the range of given observed dates, unless a start or end date are provided to override these defaults. Pivots include the end date and, where possible for the given interval, the start date. Parameters ---------- observations : list a list of observed floating point dates per sample pivot_interval : int number of months (or weeks) between pivots start_date : float optional start of the pivots interval end_date : float optional end of the pivots interval pivot_interval : str whether pivots are measured in "months" or in "weeks" Returns ------- pivots : numpy.ndarray floating point pivots spanning the given the dates """ # Convert months between pivots to pivot frequency. pivot_frequency = pivot_interval / 12.0 if pivot_interval_units == "weeks": pivot_frequency = pivot_interval / 52.1429 pivot_start = start_date if start_date else np.floor(np.min(observations) / pivot_frequency) * pivot_frequency pivot_end = end_date if end_date else np.ceil(np.max(observations) / pivot_frequency) * pivot_frequency if pivot_interval_units == "months": duration_str = f'P{pivot_interval}M' elif pivot_interval_units == "weeks": duration_str = f'P{pivot_interval}W' else: raise ValueError(f"The given interval unit '{pivot_interval_units}' is not supported.") # Construct standard Python date instances from numeric dates via ISO-8601 # dates and the corresponding delta time for the interval between pivots. start = datetime.datetime.strptime(float_to_datestring(pivot_start), "%Y-%m-%d") end = datetime.datetime.strptime(float_to_datestring(pivot_end), "%Y-%m-%d") delta = isodate.parse_duration(duration_str) # Start calculating pivots from the end date (inclusive), working backwards # in time by a time delta that matches the user-requested interval. Include # the start date in the final pivots when the interval spacing allows that # date to be included. pivots = deque([]) pivot = end while pivot >= start: pivots.appendleft(pivot) pivot = end - delta * len(pivots) pivots = np.array([numeric_date(pivot) for pivot in pivots]) return np.around(pivots, 4) def make_pivots(pivots, tps): ''' if pivots is a scalar, make a grid of pivot points covering the entire range Parameters ---------- pivots : int or iterable either number of pivots (a scalar) or the actual pivots (will be cast to array and returned) tps : numpy.ndarray observation time points. Will generate pivots spanning min/max Returns ------- pivots : numpy.ndarray array of pivot values ''' if isinstance(pivots, int): dt = np.max(tps)-np.min(tps) return np.linspace(np.min(tps)-0.01*dt, np.max(tps)+0.01*dt, pivots) else: return np.array(pivots) def count_observations(pivots, tps): pivots = make_pivots(pivots, tps) dt = pivots[1]-pivots[0] counts, _ = np.histogram(tps, bins=[pivots[0]-0.5*dt] + list(pivots+0.5*dt)) return counts def running_average(obs, ws): ''' calculates a running average obs -- observations ws -- window size (number of points to average) Parameters ---------- obs : list or numpy.ndarray(bool) observations ws : int window size as measured in number of consecutive points Returns ------- numpy.ndarray(float) running average of the boolean observations ''' ws=int(ws) try: tmp_vals = np.convolve(np.ones(ws, dtype=float)/ws, obs, mode='same') # fix the edges. using mode='same' assumes zeros outside the range if ws%2==0: tmp_vals[:ws//2]*=float(ws)/np.arange(ws//2,ws) if ws//2>1: tmp_vals[-ws//2+1:]*=float(ws)/np.arange(ws-1,ws//2,-1.0) else: tmp_vals[:ws//2]*=float(ws)/np.arange(ws//2+1,ws) tmp_vals[-ws//2:]*=float(ws)/np.arange(ws,ws//2,-1.0) except: tmp_vals = 0.5*np.ones_like(obs, dtype=float) return tmp_vals def fix_freq(freq, pc): ''' restricts frequencies to the interval [pc, 1-pc] removes np.nan values and avoids taking logarithms of 0 or divisions by 0 Parameters ---------- freq : numpy.ndarray frequency trajectory to be thresholded pc : float threshold value Returns ------- numpy.ndarray thresholded frequency trajectory ''' freq[np.isnan(freq)]=pc return np.minimum(1-pc, np.maximum(pc,freq)) def logit_transform(freq, pc): return np.log(np.maximum(freq, pc)/np.maximum(pc,(1-freq))) def logit_inv(logit_freq, pc): tmp_freq = np.maximum(pc, np.minimum(1.0/pc, np.exp(logit_freq))) return tmp_freq/(1.0+tmp_freq) def pq(p): return p*(1-p) class frequency_estimator(object): ''' estimates a smooth frequency trajectory given a series of time stamped 0/1 observations. The most likely set of frequencies at specified pivot values is determined by numerical minimization. Likelihood consist of a bernoulli sampling term as well as a term penalizing rapid frequency shifts. this term is motivated by genetic drift, i.e., sampling variation. ''' def __init__(self, tps, obs, pivots, stiffness = 20.0, inertia = 0.0, tol=1e-3, pc=1e-4, ws=100, method='powell', **kwargs): """basic frequency estimator class Parameters ---------- tps : list or numpy.ndarray(float) array with numerical dates obs : list or numpy.ndarray(bool) array with boolean observations pivots : int or numpy.ndarray(float) either integer specifying the number of pivot values, or list of explicity pivots stiffness : float, optional parameter determining how much rapid changes in frequency are penalized inertia : float, optional parameter specifying the prior for the frequency derivitative. if intertia=1, the prior is that the slope doesn't change. if intertia=0, the prior is that the slope is zero tol : float, optional optimization tolerance pc : float, optional pseudo-count/minimal frequency ws : int, optional window size used to estimate the initial guess for the frequency trajectory method : str, optional optimization method passed down to scipy.minimize **kwargs Description """ tmp_obs = np.array(sorted(zip(tps, obs), key=lambda x:x[0])) self.tps = tmp_obs[:,0] self.obs = np.array(tmp_obs[:,1], dtype=bool) self.stiffness = stiffness self.inertia = inertia self.interpolation_type = 'linear' self.tol = tol self.reg = 1e-6 self.pc = pc self.ws = ws self.verbose = 0 self.method = method self.pivots = make_pivots(pivots, self.tps) good_tps = (self.tps>=self.pivots[0])&(self.tps=tmp_interpolator.x[-1]] = tmp_vals[-1] pivot_freq =fix_freq(pivot_freq, pc) return pivot_freq def stiffLH(self): freq = self.pivot_freq dfreq = np.diff(freq) dfreq_penalty = dfreq[1:] - self.inertia*dfreq[:-1] pq_dt_freq = self.dt * pq(freq[:-1]) # return wright fisher diffusion likelihood for frequency change. return -0.25*self.stiffness*\ (np.sum(dfreq_penalty**2/pq_dt_freq[1:])+dfreq[0]**2/pq_dt_freq[0]) def learn(self, initial_guess=None): # print('optimizing with', len(self.pivots), 'pivots') self.dt = np.diff(self.pivots) def logLH(x): # x is logit frequency x = log(p/(1-p)) -> p = e^x/(1+e^x); 1-p = 1/(1+e^x) self.pivot_freq = logit_inv(x, self.pc) try: freq = interp1d(self.pivots, x, kind=self.interpolation_type,bounds_error = False, assume_sorted=True) # Throws a bug with some numpy installations, isn't necessary other than for speed. except: freq = interp1d(self.pivots, x, kind=self.interpolation_type,bounds_error = False) estfreq = freq(self.tps) # log(p^obs (1-p)^(1-obs)) = log((p/(1-p))^obs (1-p)) = obs*x - log(1+e^x) bernoulli_LH = np.sum(estfreq[self.obs]) - np.sum(np.log(1+np.exp(estfreq))) stiffness_LH = self.stiffLH() LH = stiffness_LH + bernoulli_LH return -LH + np.sum((np.abs(x)>log_thres)*x**2) from scipy.optimize import minimize if initial_guess is None: initial_freq = self.initial_guess(pc=0.01) else: initial_freq = initial_guess(self.pivots) self.frequency_estimate = interp1d(self.pivots, initial_freq, kind=self.interpolation_type, bounds_error=False) self.pivot_freq = self.frequency_estimate(self.pivots) # determine the optimal pivot freqquencies self.sol = minimize(logLH, logit_transform(self.pivot_freq, pc=self.pc), method=self.method) if self.sol['success']: self.pivot_freq = logit_inv(self.sol['x'], self.pc) #self.covariance = self.sol['hess_inv'].todense() #self.conf95 = 1.96*np.sqrt(np.diag(self.covariance)) else: if debug: import ipdb; ipdb.set_trace() if self.method != "powell": print("Optimization failed, trying with powell") self.sol = minimize(logLH, logit_transform(self.pivot_freq,self.pc), method='powell') self.pivot_freq = logit_inv(self.sol['x'], self.pc) self.pivot_freq = fix_freq(self.pivot_freq, self.pc) # instantiate an interpolation object based on the optimal frequency pivots self.frequency_estimate = interp1d(self.pivots, self.pivot_freq, kind=self.interpolation_type, bounds_error=False) if self.verbose: print ("neg logLH using",len(self.pivots),"pivots:", self.logLH(self.pivot_freq)) class freq_est_clipped(object): """ simple wrapper for the frequency estimator that attempts to estimate a frequency trajectory on a sensible range of pivots to avoid frequency optimization at points without data Attributes ---------- dtps Description fe Description good_pivots Description good_tps Description obs Description pivot_freq Description pivot_lower_cutoff Description pivot_upper_cutoff Description pivots Description tps Description valid : bool Description """ def __init__(self, tps, obs, pivots, dtps=None, **kwargs): super(freq_est_clipped, self).__init__() tmp_obs = np.array(sorted(zip(tps, obs), key=lambda x:x[0])) self.tps = tmp_obs[:,0] self.obs = np.array(tmp_obs[:,1], dtype=bool) self.pivots = pivots pivot_dt = self.pivots[1]-self.pivots[0] if dtps==None: self.dtps = 6.0*pivot_dt else: self.dtps = max(dtps, pivot_dt) cum_obs = np.diff(self.obs).cumsum() first_obs = max(pivots[0], self.tps[cum_obs.searchsorted(cum_obs[0]+1)]) last_obs = min(pivots[-1], max(first_obs,self.tps[min(len(self.tps)-1, 20+cum_obs.searchsorted(cum_obs[-1]))])) tps_lower_cutoff = first_obs - self.dtps tps_upper_cutoff = last_obs + self.dtps self.good_tps = (self.tps>=tps_lower_cutoff)&(self.tps=self.pivots[0]) self.valid = True if self.good_tps.sum()<3: print("too few valid time points:", self.good_tps.sum()) self.valid=False return None if self.good_tps.sum()<7: from scipy.ndimage import binary_dilation self.good_tps = binary_dilation(self.good_tps, iterations=5) reduced_obs = self.obs[self.good_tps] reduced_tps = self.tps[self.good_tps] self.pivot_lower_cutoff = min(reduced_tps[0], tps_lower_cutoff)-pivot_dt self.pivot_upper_cutoff = max(reduced_tps[-1], tps_upper_cutoff)+pivot_dt self.good_pivots = (self.pivots>=self.pivot_lower_cutoff)\ &(self.pivots=self.pivot_upper_cutoff] = 0.0 else: self.pivot_freq[self.pivots>=self.pivot_upper_cutoff] = 1.0 class nested_frequencies(object): """ estimates frequencies of mutually exclusive events such as mutations at a particular genomic position or subclades in a tree """ def __init__(self, tps, obs, pivots, **kwargs): """Summary Parameters ---------- tps : numpy.ndarray array of numerical dates obs : numpy.ndarray(bool) array of true/false observations pivots : numpy.ndarray pivot values **kwargs Description """ super(nested_frequencies, self).__init__() self.tps = tps self.obs = obs self.pivots = pivots self.kwargs = kwargs def calc_freqs(self): sorted_obs = sorted(self.obs.items(), key=lambda x:x[1].sum(), reverse=True) self.remaining_freq = np.ones_like(self.pivots) self.frequencies = {} valid_tps = np.ones_like(self.tps, dtype=bool) for mut, obs in sorted_obs[:-1]: # print(mut,'...') fe = freq_est_clipped(self.tps[valid_tps], obs[valid_tps], self.pivots, **self.kwargs) if fe.valid==False: self.frequencies[mut] = np.zeros_like(self.remaining_freq) break fe.learn() self.frequencies[mut] = self.remaining_freq * fe.pivot_freq self.remaining_freq *= (1.0-fe.pivot_freq) valid_tps = valid_tps&(~obs) self.frequencies[sorted_obs[-1][0]] = self.remaining_freq return self.frequencies class tree_frequencies(object): ''' class that estimates frequencies for nodes in the tree. each internal node is assumed to be named with an attribute clade, of root doesn't have such an attribute, clades will be numbered in preorder. Each node is assumed to have an attribute `attr` with a key "num_date". ''' def __init__(self, tree, pivots, node_filter=None, min_clades=10, verbose=0, pc=1e-4, **kwargs): ''' set up the internal tree, the pivots and cutoffs Parameters ---------- tree : Bio.Phylo.BaseTree.Tree Biopython tree pivots : int or array number or list of pivots node_filter : callable, optional function that evaluates to true/false to filter nodes min_clades : int, optional minimal size of clades to estimate proper frequencies verbose : int, optional verbosity pc : float, optional pseudo-counts/lower cutoff to drive estimates away from 0/1 **kwargs Description ''' self.tree = tree self.min_clades = min_clades self.pivots = pivots self.kwargs = kwargs self.verbose = verbose self.pc = pc if node_filter is None: self.node_filter = lambda x:True else: self.node_filter = node_filter self.prepare() def prepare(self): # name nodes if they aren't already named if not hasattr(self.tree.root, 'clade'): for ni,node in enumerate(self.tree.find_clades(order='preorder')): node.clade = ni # extract all observations tps = [] leaf_count = 0 for node in self.tree.find_clades(order='postorder'): if node.is_terminal(): if self.node_filter(node): tps.append(node.attr["num_date"]) node.leafs = np.array([leaf_count], dtype=int) leaf_count+=1 else: node.leafs = np.array([], dtype=int) else: node.leafs = np.concatenate([c.leafs for c in node.clades]) self.tps = np.array(tps) if np.isscalar(self.pivots): self.frequencies = {self.tree.root.clade:np.ones(self.pivots)} else: self.frequencies = {self.tree.root.clade:np.ones_like(self.pivots)} self.counts = count_observations(self.pivots, self.tps) def estimate_clade_frequencies(self): for node in self.tree.get_nonterminals(order='preorder'): if self.verbose: print("Estimating frequencies of children of node ",node.clade) node_tps = self.tps[node.leafs] obs_to_estimate = {} small_clades = [] if len(node.clades)==1: self.frequencies[node.clades[0].clade] = self.frequencies[node.clade] continue for c in node.clades: if len(c.leafs)>self.min_clades: obs_to_estimate[c.clade] = np.in1d(node.leafs, c.leafs) else: # Only include internal nodes or tips that pass the node # filter as small clades. if not c.is_terminal() or self.node_filter(c): small_clades.append(c) if len(obs_to_estimate): if len(small_clades): remainder = {} for c in small_clades: remainder[c.clade] = np.in1d(node.leafs, c.leafs) if len(small_clades)==1: obs_to_estimate.update(remainder) else: obs_to_estimate['other'] = np.any(list(remainder.values()), axis=0) ne = nested_frequencies(node_tps, obs_to_estimate, self.pivots, pc=self.pc, **self.kwargs) freq_est = ne.calc_freqs() for clade, tmp_freq in freq_est.items(): if clade != "other": self.frequencies[clade] = self.frequencies[node.clade] * tmp_freq if len(small_clades) > 1: total_leaves_in_small_clades = 0 for clade in small_clades: total_leaves_in_small_clades += len(clade.leafs) for clade in small_clades: if total_leaves_in_small_clades > 0: frac = len(clade.leafs) / total_leaves_in_small_clades else: frac = 0.0 self.frequencies[clade.clade] = frac * freq_est["other"] * self.frequencies[node.clade] else: for clade in small_clades: if len(node.leafs): frac = 1.0*len(clade.leafs)/len(node.leafs) else: frac = 0.0 self.frequencies[clade.clade] = frac*self.frequencies[node.clade] # Assign zero frequencies to tips that did not pass the node_filter. for tip in self.tree.get_terminals(): if not self.node_filter(tip): self.frequencies[tip.clade] = np.zeros(len(self.pivots)) def calc_confidence(self): ''' for each frequency trajectory, calculate the bernouilli sampling error -- in reality we should look at the inverse hessian, but this is a useful approximation in most cases Returns ------- dict dictionary with estimated confidence intervals ''' self.confidence = {} for key, freq in self.frequencies.items(): # add a pseudo count 1/(n+1) and normalize to n+1 self.confidence[key] = np.sqrt((1.0/(1+self.counts)+freq*(1-freq))/(1.0+self.counts)) return self.confidence class alignment_frequencies(object): ''' calculates frequencies of mutations in an alignment. uses nested frequencies for mutations at a particular site such that mutations are forced to add up to one. ''' def __init__(self, aln, tps, pivots, **kwargs): """Create an instance of the alignment frequency estimate Parameters ---------- aln : Bio.Align.MultipleSeqAlignment alignment tps : np.ndarray(float) Array of numerical dates, one for each sequence in the alignment in the SAME ORDER! pivots : np.ndarray(float) pivot values for which frequencies are estimated **kwargs Description """ self.aln = np.array(aln) self.tps = np.array(tps) self.kwargs = kwargs self.pivots = pivots self.counts = count_observations(self.pivots, self.tps) def estimate_genotype_frequency(self, aln, gt, **kwargs): ''' slice an alignment at possibly multiple positions and calculate the frequency trajectory of this multi-locus genotype Parameters ---------- gt : list a list of (position, state) tuples specifying the genotype whose frequency is to be estimated Returns ------- numpy.ndarray frequency trajectory ''' match = [] for pos, state in gt: match.append(aln[:,pos]==state) obs = np.array(match).all(axis=0) fe = frequency_estimator(zip(self.tps, obs),self.pivots, **kwargs) fe.learn() return fe.frequency_estimate def mutation_frequencies(self, min_freq=0.01, include_set=None, ignore_char=''): ''' estimate frequencies of single site mutations for each alignment column. This function populates a dictionary class.frequencies with the frequency trajectories. Parameters ---------- min_freq : float, optional minimal all-time frequency for an aligment column to be considered include_set : list or set, optional set of alignment column that will be used regardless of variation ignore_char : str, optional ignore this character in an alignment column (missing data) ''' if include_set is None: include_set=[] alphabet = np.unique(self.aln) # af: rows correspond to letters of the alphabet, columns positions in the alignemtn, values: frequencies af = np.zeros((len(alphabet), self.aln.shape[1])) for ni, n in enumerate(alphabet): af[ni] = (self.aln==n).mean(axis=0) # minor_freqs: frequencies of all alleles not the major one! ignore_char is excluded if ignore_char: minor_freqs = af[alphabet!=ignore_char].sum(axis=0) - af[alphabet!=ignore_char].max(axis=0) else: minor_freqs = 1.0 - af.max(axis=0) self.frequencies = {} for pos in sorted(set.union(set(np.where(minor_freqs>min_freq)[0]), include_set)): # indices determine the indicies of mutations in descending order by frequency nis = np.argsort(af[:,pos])[::-1] nis = nis[af[nis,pos]>0] column = self.aln[:,pos] if ignore_char: # subset sequences, time points and alphabet to non-gapped and non X good_seq = (column!=ignore_char)&(column!='X') #array of bools, length = # seqs in aln tps=self.tps[good_seq] column = column[good_seq] nis = nis[(alphabet[nis]!=ignore_char)&(alphabet[nis]!='X')] else: tps = self.tps if len(nis)==0: # no characters with any frequencies (column of ignore chars) continue muts = alphabet[nis] obs = {} for ni, mut in zip(nis, muts): if (af[ni,pos]>min_freq and af[ni,pos]<1-min_freq) or ni==0 or (pos in include_set): obs[(pos, mut)] = column==mut else: break # if multiple states are below frequency threshold, glob them together as 'other' if len(obs)==0: obs[(pos, muts[0])] = column==muts[0] elif len(obs)!=len(nis): tmp = ~np.any(list(obs.values()), axis=0) # pull out sequences not yet assigned if any(tmp): if len(obs)==len(nis)-1: # if only category left, assign it obs[(pos, muts[-1])] = tmp else: #other wise, call that mutation 'other' obs[(pos, 'other')] = tmp print("Estimating frequencies of position: {}".format(pos), end="\r") sys.stdout.flush() # print("Variants found at frequency:", [(k,o.mean()) for k,o in obs.items()]) # calculate frequencies, which will be added to the frequencies dict with (pos, mut) as key ne = nested_frequencies(tps, obs, self.pivots, **self.kwargs) self.frequencies.update(ne.calc_freqs()) def calc_confidence(self): """calculate a crude binomial sampling confidence interval of the frequency estimate. This ignores autocorrelation of the trajectory and returns one standard deviation (68%). Returns ------- dict dictionary of standard deviations for each estimated trajectory """ self.confidence = {} for key, freq in self.frequencies.items(): # add a pseudo count 1/(n+1) and normalize to n+1 self.confidence[key] = np.sqrt((1.0/(1+self.counts)+freq*(1-freq))/(1.0+self.counts)) return self.confidence def test_simple_estimator(): try: import matplotlib.pyplot as plt except ImportError: plot=False print("Plotting requires a working matplotlib installation.") tps = np.sort(100 * np.random.uniform(size=500)) freq_traj = [0.1] stiffness=100 s=-0.02 for dt in np.diff(tps): freq_traj.append(freq_traj[-1]*np.exp(-s*dt)+np.sqrt(2*np.max(0,freq_traj[-1]*(1-freq_traj[-1]))*dt/stiffness)*np.random.normal()) obs = np.random.uniform(size=tps.shape)=freq_traj*0.5)&(tmp=freq_traj*0.7 fe = nested_frequencies(tps, obs, pivots=20, stiffness=stiffness, inertia=0.7) nested_freq = fe.calc_freqs() if plot: plt.figure() for k,o in obs.items(): plt.plot(tps, o, 'o') plt.plot(fe.pivots,fe.frequencies[k], 'o') return nested_freq def float_to_datestring(numdate): """convert a numeric decimal date to a python datetime object Note that this only works for AD dates since the range of datetime objects is restricted to year>1. Copied from treetime.utils Parameters ---------- numdate : float numeric date as in 2018.23 Returns ------- datetime.datetime datetime object """ from calendar import isleap days_in_year = 366 if isleap(int(numdate)) else 365 # add a small number of the time elapsed in a year to avoid # unexpected behavior for values 1/365, 2/365, etc days_elapsed = int(((numdate%1)+1e-10)*days_in_year) date = datetime.datetime(int(numdate),1,1) + datetime.timedelta(days=days_elapsed) return "%s-%02d-%02d" % (date.year, date.month, date.day) def timestamp_to_float(time): """Convert a pandas timestamp to a floating point date. This is not entirely accurate as it doesn't account for months with different numbers of days, but should be close enough to be accurate for weekly pivots. Examples -------- >>> import datetime >>> time = datetime.date(2010, 10, 1) >>> timestamp_to_float(time) 2010.75 >>> time = datetime.date(2011, 4, 1) >>> timestamp_to_float(time) 2011.25 >>> timestamp_to_float(datetime.date(2011, 1, 1)) 2011.0 >>> timestamp_to_float(datetime.date(2011, 12, 1)) == (2011.0 + 11.0 / 12) True """ return time.year + ((time.month - 1) / 12.0) + ((time.day - 1) / 365.25) class KdeFrequencies(object): """Methods to estimate clade frequencies for phylogenetic trees by creating normal distributions from timestamped tips in the tree and building a kernel density estimate across discrete time points from these tip observations for each clade in the tree. """ def __init__(self, sigma_narrow=1 / 12.0, sigma_wide=3 / 12.0, proportion_wide=0.2, pivot_frequency=1, start_date=None, end_date=None, pivot_interval_units="months", weights=None, weights_attribute=None, node_filters=None, max_date=None, include_internal_nodes=False, censored=False): """Define parameters for KDE-based frequency estimation. Args: sigma_narrow (float): Bandwidth for first of two Gaussians composing the KDEs sigma_wide (float): Bandwidth for second of two Gaussians composing the KDEs proportion_wide (float): Proportion of the second Gaussian to include in each KDE pivot_frequency (int): Number of months between pivots start_date (float): start of the pivots interval end_date (float): end of the pivots interval pivot_interval_units (str): Whether pivot intervals are measured in "months" or "weeks" weights (dict): Numerical weights indexed by attribute values and applied to individual tips weights_attribute (str): Attribute annotated on tips of a tree to use for weighting node_filters (dict): Mapping of node attribute names (keys) to a list of valid values to keep max_date (float): Maximum year beyond which tips are excluded from frequency estimation and are assigned frequencies of zero include_internal_nodes (bool): Whether internal (non-tip) nodes should have their frequencies estimated censored (bool): Whether future observations should be censored at each pivot Returns: KdeFrequencies """ self.sigma_narrow = sigma_narrow self.sigma_wide = sigma_wide self.proportion_wide = proportion_wide self.pivot_frequency = pivot_frequency self.start_date = start_date self.end_date = end_date self.pivot_interval_units = pivot_interval_units self.weights = weights self.weights_attribute = weights_attribute self.node_filters = node_filters self.max_date = max_date self.include_internal_nodes = include_internal_nodes self.censored = censored def get_params(self): """ Returns the parameters used to define the current instance. Returns: dict: parameters that define the current instance and that can be used to create a new instance """ return { "sigma_narrow": self.sigma_narrow, "sigma_wide": self.sigma_wide, "proportion_wide": self.proportion_wide, "pivot_frequency": self.pivot_frequency, "start_date": self.start_date, "end_date": self.end_date, "pivot_interval_units": self.pivot_interval_units, "weights": self.weights, "weights_attribute": self.weights_attribute, "max_date": self.max_date, "include_internal_nodes": self.include_internal_nodes, "node_filters": self.node_filters, "censored": self.censored } @classmethod def from_json(cls, json_dict): """Returns an instance populated with parameters and data from the given JSON dictionary. """ params = json_dict["params"] instance = cls(**params) if "data" in json_dict: instance.pivots = np.array(json_dict["data"]["pivots"]) frequencies = json_dict["data"]["frequencies"] instance.frequencies = {} for clade in frequencies: instance.frequencies[clade] = np.array(frequencies[clade]) return instance def to_json(self): """Returns a dictionary for the current instance that can be serialized in a JSON file. """ frequencies_json = { "params": self.get_params() } # If frequencies have been estimated, export them along with the pivots as data. if hasattr(self, "frequencies"): frequencies = {} for clade in self.frequencies: # numpy arrays are not supported by JSON and need to be converted to lists. frequencies[clade] = self.frequencies[clade].tolist() frequencies_json["data"] = { "pivots": self.pivots.tolist(), "frequencies": frequencies } return frequencies_json @classmethod def get_density_for_observation(cls, mu, pivots, sigma_narrow=1/12.0, sigma_wide=3/12.0, proportion_wide=0.2, **kwargs): """Build a normal distribution centered across the given floating point date, mu, with a standard deviation based on the given sigma value and return the probability mass at each pivot. These mass values per pivot will form the input for a kernel density estimate across multiple observations. """ return ((1-proportion_wide) * norm.pdf(pivots, loc=mu, scale=sigma_narrow) + proportion_wide * norm.pdf(pivots, loc=mu, scale=sigma_wide)) @classmethod def get_densities_for_observations(cls, observations, pivots, max_date=None, **kwargs): """Create a matrix of densities for one or more observations across the given pivots with one row per observation and one column per pivot. Observations can be optionally filtered by a maximum date such that all densities are estimated to be zero after that date. """ density_matrix = np.zeros((len(observations), len(pivots))) for i, obs in enumerate(observations): # If the given observation occurred outside the given pivots or # after the given maximum date, do not try to estimate its # frequency. if (obs < pivots[0] or obs > pivots[-1]) or (max_date is not None and obs > max_date): density = np.zeros_like(pivots) else: density = cls.get_density_for_observation(obs, pivots, **kwargs) density_matrix[i] = density return density_matrix @classmethod def normalize_to_frequencies(cls, density_matrix, normalize_to=1.0): """Normalize the values of a given density matrix to 1 across all columns (time points) with non-zero sums. This converts kernal PDF mass into a frequency estimate. """ normalized_freq_matrix = density_matrix.copy() # Find columns that can be meaningfully normalized. nonzero_columns = np.where(density_matrix.sum(axis=0) > 0)[0] # Normalize by column. normalized_freq_matrix[:, nonzero_columns] = (normalize_to * density_matrix[:, nonzero_columns] / density_matrix[:, nonzero_columns].sum(axis=0)) return normalized_freq_matrix @classmethod def estimate_frequencies(cls, tip_dates, pivots, normalize_to=1.0, max_date=None, **kwargs): """Estimate frequencies of the given observations across the given pivots. """ # Calculate base frequencies from observations. if kwargs.get("censored"): # Calculate censored frequencies at each pivot. If a maximum date # has already been requested, only calculate censored frequencies up # to that point. if max_date is None: max_date = pivots[-1] pivots_to_censor = [pivot for pivot in pivots if pivot <= max_date] density_matrix = None for i, pivot in enumerate(pivots_to_censor): # Censor observations from the future using the smallest value # of either the current pivot or the requested max date. censored_matrix = cls.get_densities_for_observations( tip_dates, pivots, max_date=min(pivot, max_date), **kwargs ) if density_matrix is None: density_matrix = censored_matrix else: density_matrix[:, i] = censored_matrix[:, i] else: density_matrix = cls.get_densities_for_observations(tip_dates, pivots, max_date=max_date, **kwargs) # Normalize frequencies to sum to 1. normalized_freq_matrix = cls.normalize_to_frequencies(density_matrix, normalize_to=normalize_to) return normalized_freq_matrix class TreeKdeFrequencies(KdeFrequencies): """KDE frequency estimator for phylogenetic trees Estimates frequencies for samples provided as annotated tips on a given tree and optionally reports clade-level frequencies based on the sum of each clade's respective tips. """ def tip_passes_filters(self, tip): """Returns a boolean indicating whether a given tip passes the node filters defined for the current instance. If no filters are defined, returns True. Args: tip (Bio.Phylo.BaseTree.Tree): tip from a Bio.Phylo tree annotated with attributes in `tip.attr` Returns: bool: whether the given tip passes the defined filters or not """ return (self.node_filters is None or all([tip.attr[key] in values for key, values in self.node_filters.items()])) def estimate_tip_frequencies_to_proportion(self, tips, proportion): """Estimate frequencies for a given set of tips up to a given proportion of total frequencies. Args: tips (list): a list of Bio.Phylo terminals annotated with attributes in `tip.attr` proportion (float): the proportion of the total frequency that the given tips should represent Returns: dict: frequencies of given tips indexed by tip name """ clade_frequencies = {} # If none of the tips pass the given node filters, do not try to # normalize tip frequencies. if len(tips) == 0: return clade_frequencies tips = np.array(sorted(tips, key=lambda row: row[1])) clades = tips[:, 0] tip_dates = tips[:, 1].astype(float) # Map clade ids to their corresponding frequency matrix row index. clade_to_index = {clades[i]: i for i in range(len(clades))} # Calculate tip frequencies and normalize. normalized_freq_matrix = self.estimate_frequencies( tip_dates, self.pivots, normalize_to=proportion, sigma_narrow=self.sigma_narrow, sigma_wide=self.sigma_wide, proportion_wide=self.proportion_wide, max_date=self.max_date, censored=self.censored ) for clade in clades: clade_frequencies[clade] = normalized_freq_matrix[clade_to_index[clade]] return clade_frequencies def estimate(self, tree): """Estimate frequencies for a given tree using the parameters defined for this instance. If weights are defined, frequencies represent a weighted mean across the values in attribute defined by `self.weights_attribute`. Args: tree (Bio.Phylo.BaseTree.Tree): annotated tree whose nodes all have an `attr` attribute with at least "num_date" key Returns: dict: node frequencies by clade """ # Calculate pivots for the given tree. observations = [tip.attr["num_date"] for tip in tree.get_terminals()] self.pivots = get_pivots( observations, self.pivot_frequency, start_date=self.start_date, end_date=self.end_date, pivot_interval_units=self.pivot_interval_units ) # If weights are defined, calculate frequencies for all tips by their # weight attribute values such that the total frequency of all tips with # a given value sums to the proportion of tips that have that value. # If weights are not defined, estimate frequencies such that they sum to 1. if self.weights: # Determine which weight attributes are represented in the # tree. Drop any unrepresented attributes and renormalize the # remaining proportions per attribute to sum to one before # estimating frequencies. weights_represented = set([ tip.attr[self.weights_attribute] for tip in tree.find_clades(terminal=True) ]) if len(self.weights) != len(weights_represented): # Remove unrepresented weights. weights_unrepresented = set(self.weights.keys()) - weights_represented for weight in weights_unrepresented: del self.weights[weight] # Renormalize the remaining weights. weight_total = sum(self.weights.values()) for key, value in self.weights.items(): self.weights[key] = value / weight_total # Confirm that one or more weights are represented by tips in the # tree. If there are no more weights, raise an exception because # this likely represents a data error (either in the tree # annotations or the weight definitions). if len(self.weights) == 0: raise TreeKdeFrequenciesError("None of the provided weight attributes were represented by tips in the given tree. Doublecheck weight attribute definitions and their representations in the tree.") # Estimate frequencies for all tips within each weight attribute # group. weight_keys, weight_values = zip(*sorted(self.weights.items())) proportions = np.array(weight_values) / np.array(weight_values).sum(axis=0) frequencies = {} for (weight_key, proportion) in zip(weight_keys, proportions): # Find tips with the current weight attribute. tips = [(tip.name, tip.attr["num_date"]) for tip in tree.get_terminals() if tip.attr[self.weights_attribute] == weight_key and self.tip_passes_filters(tip)] frequencies.update(self.estimate_tip_frequencies_to_proportion(tips, proportion)) else: tips = [(tip.name, tip.attr["num_date"]) for tip in tree.get_terminals() if self.tip_passes_filters(tip)] frequencies = self.estimate_tip_frequencies_to_proportion(tips, proportion=1.0) # Assign zero frequencies to any tips that were filtered out of the frequency estimation. for tip in tree.get_terminals(): if not tip.name in frequencies: frequencies[tip.name] = np.zeros_like(self.pivots) if self.include_internal_nodes: for node in tree.find_clades(order="postorder"): if not node.is_terminal(): frequencies[node.name] = np.array( [frequencies[child.name] for child in node.clades] ).sum(axis=0) # Store frequencies in the current instance for simplified exporting. self.frequencies = frequencies return frequencies class AlignmentKdeFrequencies(KdeFrequencies): """KDE frequency estimator for multiple sequence alignments Estimates frequencies for samples provided as sequences in a multiple sequence alignment and corresponding observation dates for each sequence. """ def estimate(self, alignment, observations): """Estimate frequencies of bases/residues at each site in a given multiple sequence alignment based on the observation dates associated with each sequence in the alignment. """ # Calculate pivots for the given tree. self.pivots = get_pivots( observations, self.pivot_frequency, start_date=self.start_date, end_date=self.end_date, pivot_interval_units=self.pivot_interval_units ) # Pair alignment sequence indices with observation dates. samples = zip(range(len(alignment)), observations) # Sort samples by date and extract sequence indices and dates. samples = np.array(sorted(samples, key=lambda row: row[1])) sample_indices = samples[:, 0] sample_dates = samples[:, 1].astype(float) # Map sample alignment indices to their corresponding frequency matrix row indices. sample_to_index = {sample_indices[i]: i for i in range(len(samples))} # Calculate tip frequencies and normalize. normalized_freq_matrix = self.estimate_frequencies( sample_dates, self.pivots, sigma_narrow=self.sigma_narrow, sigma_wide=self.sigma_wide, proportion_wide=self.proportion_wide, max_date=self.max_date, censored=self.censored ) # Calculate frequencies per site and base/residue from the estimated # frequencies per sample. frequencies = {} for position in range(alignment.get_alignment_length()): # Only estimate frequencies at sites with variation. if len(set(alignment[:, position])) > 1: for sample, base in enumerate(alignment[:, position]): # Estimate frequencies by current position and base/residue # at the position for each sample. key = "%s:%s" % (position + 1, base.upper()) if key not in frequencies: frequencies[key] = np.zeros_like(self.pivots) frequencies[key] += normalized_freq_matrix[sample_to_index[sample], :] self.frequencies = frequencies return frequencies if __name__=="__main__": plot=True fe = test_nested_estimator() #fe = test_simple_estimator() augur-24.2.2/augur/import_/000077500000000000000000000000001456376326500155415ustar00rootroot00000000000000augur-24.2.2/augur/import_/__init__.py000066400000000000000000000011001456376326500176420ustar00rootroot00000000000000""" Import analyses into augur pipeline from other systems """ from augur.argparse_ import add_command_subparsers from augur.utils import first_line from . import beast SUBCOMMANDS = [ beast, ] def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("import", help=first_line(__doc__)) metavar_msg = "Import analyses into augur pipeline from other systems" subparsers = parser.add_subparsers(title="TYPE", metavar=metavar_msg) add_command_subparsers(subparsers, SUBCOMMANDS) return parser augur-24.2.2/augur/import_/beast.py000066400000000000000000000645641456376326500172300ustar00rootroot00000000000000""" Parse a BEAST MCC tree for further analysis in augur or export for auspice v2+ (using `augur export v2` or greater). """ import re import sys import json import datetime as dt from argparse import SUPPRESS from collections import defaultdict import numpy as np from Bio import Phylo from treetime import TreeAnc from augur.io.file import open_file from augur.utils import write_json def register_parser(parent_subparsers): """ Arguments available to `augur import beast` """ beast_parser = parent_subparsers.add_parser('beast', help="Import beast analysis") beast_parser.add_argument("--beast", help=SUPPRESS, default=True) # used to disambiguate subcommands beast_parser.add_argument('--mcc', required=True, help="BEAST MCC tree") beast_parser.add_argument('--most-recent-tip-date', default=0, type=float, help='Numeric date of most recent tip in tree (--tip-date-regex, --tip-date-format and --tip-date-delimeter are ignored if this is set)') beast_parser.add_argument('--tip-date-regex', default=r'[0-9]{4}(\-[0-9]{2})*(\-[0-9]{2})*$', type=str, help='regex to extract dates from tip names') beast_parser.add_argument('--tip-date-format', default="%Y-%m-%d", type=str, help='Format of date (if extracted by regex)') beast_parser.add_argument('--tip-date-delimeter', default="-", type=str, help='delimeter used in tip-date-format. Used to match partial dates.') beast_parser.add_argument('--verbose', action="store_true", help="Display verbose output. Only useful for debugging.") beast_parser.add_argument('--recursion-limit', default=False, type=int, help="Set a custom recursion limit (dangerous!)") beast_parser.add_argument('--output-tree', required=True, type=str, help='file name to write tree to') beast_parser.add_argument('--output-node-data', required=True, type=str, help='file name to write (temporal) branch lengths & BEAST traits as node data') return beast_parser def parse_beast_tree(data, tipMap, verbose=False): """ Parses the BEAST tree (and attributes etc) as encoded in NEXUS. Parameters ---------- data : string The (really long) line in the NEXUS file beginning with "tree", pruned to start at the first "(" character. tipMap : dict Mapping of tips (as encoded in `data`) to their names verbose : bool, optional (default: false) Should output be printed? Returns ------- Author: Gytis Dudas """ i=0 ## is an adjustable index along the tree string, it is incremented to advance through the string stored_i=None ## store the i at the end of the loop, to make sure we haven't gotten stuck somewhere in an infinite loop cur_node = Phylo.Newick.Clade() ## new branch cur_node.name = 'root' ## start with root cur_node.clades = [] ## list of children node_count=0 ## node counter while i != len(data): ## while there's characters left in the tree string - loop away if stored_i == i and verbose==True: print('%d >%s<'%(i,data[i])) assert (stored_i != i),'\nTree string unparseable\nStopped at >>%s<<\nstring region looks like this: %s'%(data[i],data[i:i+5000]) ## make sure that you've actually parsed something last time, if not - there's something unexpected in the tree string stored_i=i ## store i for later if data[i] == '(': ## look for new nodes node = Phylo.Newick.Clade() ## new object node.name = 'NODE_%07d'%(node_count) ## node name if verbose==True: print('%d adding node %s'%(i, node.name)) node.branch = 0.0 ## new node's branch length 0.0 for now node.up = cur_node ## new node's parent is current node node.clades = [] ## new node will have children node.attrs = {} ## initiate attrs dictionary cur_node.clades.append(node) ## add new node to children of current node cur_node = node ## new node is now current node node_count += 1 ## increment node counter i+=1 ## advance in tree string by one character numericalTip=re.match(r'(\(|,)([0-9]+)(\[|\:)',data[i-1:i+100]) ## look for tips in BEAST format (integers). if numericalTip is not None: node = Phylo.Newick.Clade() ## new object if tipMap: node.name = tipMap[numericalTip.group(2)] ## assign decoded name else: node.name = str(numericalTip.group(2)); ## use the integer as the name if tipMap isn't set if verbose==True: print('%d adding leaf (BEAST) %s (%s)'%(i,numericalTip.group(2), node.name)) node.up = cur_node ## leaf's parent is cur_node node.attrs = {} ## initiate attrs dictionary cur_node.clades.append(node) ## assign leaf to children of parent cur_node = node ## cur_node is leaf i+=len(numericalTip.group(2)) ## advance in tree string by however many characters the tip is encoded alphaTip=re.match(r'(\(|,)(\'|\")*([A-Za-z\_\-\|\.0-9\?\/]+)(\'|\"|)(\[)*',data[i-1:i+200]) ## look for tips with unencoded names - if the tips have some unusual format you'll have to modify this if alphaTip is not None: if verbose==True: print('%d adding leaf (non-BEAST) %s'%(i,alphaTip.group(3))) node = Phylo.Newick.Clade() ## new object node.name = alphaTip.group(3) ## assign name node.up = cur_node ## leaf's parent is cur_node node.attrs = {} ## initiate attrs dictionary cur_node.clades.append(node) ## assign leaf to children of parent cur_node = node ## cur_node is leaf i+=len(alphaTip.group(3))+alphaTip.group().count("'")+alphaTip.group().count('"') ## advance in tree string by however many characters the tip is encoded multitypeNode=re.match(r'\)([0-9]+)\[',data[i-1:i+100]) ## look for multitype tree singletons. if multitypeNode is not None: if verbose==True: print('%d adding multitype node %s'%(i,multitypeNode.group(1))) i+=len(multitypeNode.group(1)) commentBlock=re.match(r'(\:)*\[(&[A-Za-z\_\-{}\,0-9\.\%=\"\'\+!#]+)\]',data[i:])## look for MCC comments if commentBlock is not None: if verbose==True: print('%d comment: %s'%(i,commentBlock.group(2))) comment=commentBlock.group(2) numerics=re.findall(r'[,&][A-Za-z\_\.0-9]+=[0-9\-Ee\.]+',comment) ## find all entries that have values as floats strings=re.findall(r'[,&][A-Za-z\_\.0-9]+=["|\']*[A-Za-z\_0-9\.\+]+["|\']*',comment) ## strings treelist=re.findall(r'[,&][A-Za-z\_\.0-9]+={[A-Za-z\_,{}0-9\.]+}',comment) ## complete history logged robust counting (MCMC trees) sets=re.findall(r'[,&][A-Za-z\_\.0-9\%]+={[A-Za-z\.\-0-9eE,\"\_]+}',comment) ## sets and ranges figtree=re.findall(r'\![A-Za-z]+=[A-Za-z0-9#]+',comment) ## figtree comments, in case MCC was manipulated in FigTree for vals in strings: ## string states go here tr,val=vals.split('=') ## split into key and value tr=tr[1:] ## key has preceding & or , if re.search(r'.*[^0-9\.eE].*',val) is not None: ## string regex can sometimes match floats (thanks to beast2), only allow values with at least one non-numeric character if '+' in val: ## state was equiprobable with something else equiprobable=val.split('+') ## get set of equiprobable states val=equiprobable[np.random.randint(len(equiprobable))] ## DO NOT ALLOW EQUIPROBABLE DOUBLE ANNOTATIONS (which are in format "A+B") cur_node.attrs[tr]=val.strip('"') ## assign value to attrs, strip " for vals in numerics: ## assign all parsed annotations to traits of current branch tr,val=vals.split('=') ## split each value by =, left side is name, right side is value tr=tr[1:] ## ignore preceding & or , if 'prob' not in tr: cur_node.attrs[tr]=float(val) ## assign float to attrs # for val in treelist: ### enables parsing of complete history logger output from posterior trees # tr,val=val.split('=') # tr=tr[1:] # completeHistoryLogger=re.findall(r'{([0-9]+,[0-9\.\-e]+,[A-Z]+,[A-Z]+)}',val) # setattr(cur_node,'muts',[]) # for val in completeHistoryLogger: # codon,timing,start,end=val.split(',') # cur_node.muts.append('%s%s%s'%(start,codon,end)) states={} ## credible sets will be stored here for vals in sorted(sets,key=lambda s:'.set.prob' in s.split('=')[0]): ## sort comments so sets come before set probabilities tr,val=vals.split('=') ## split comment into key and value tr=tr[1:] ## key has & or , in front if 'set' in tr: ## dealing with set trait=tr.split('.set')[0] ## get trait name if '.prob' not in tr: ## dealing with credible set states[trait]=[v.strip('"') for v in val[1:-1].split(',')] ## store credible set elif '.prob' in tr: ## dealing with probability set probs=map(float,val[1:-1].split(',')) ## turn probability set into a list of floats cur_node.attrs['%s_confidence'%(trait)]={t:p for t,p in zip(states[trait],probs)} ## create dictionary of state:probability elif 'range' in tr: ## range, best to ignore pass #cur_node.attrs[tr.replace('range','maxima')]=list(map(float,val[1:-1].split(','))) ## list of floats elif 'HPD' in tr: ## highest posterior densities cur_node.attrs[tr.replace('95%_HPD','confidence')]=list(map(float,val[1:-1].split(','))) ## list of floats if len(figtree)>0: print('FigTree comment found, ignoring') i+=len(commentBlock.group()) ## advance in tree string by however many characters it took to encode comments nodeLabel=re.match(r'([A-Za-z\_\-0-9\.]+)(\:|\;)',data[i:])## look for old school node labels if nodeLabel is not None: if verbose==True: print('old school comment found: %s'%(nodeLabel.group(1))) cur_node.name=nodeLabel.group(1) i+=len(nodeLabel.group(1)) branchLength=re.match(r'(\:)*([0-9\.\-Ee]+)',data[i:i+100]) ## look for branch lengths without comments if branchLength is not None: if verbose==True: print('adding branch length (%d) %.6f'%(i,float(branchLength.group(2)))) setattr(cur_node,'branch_length',float(branchLength.group(2))) i+=len(branchLength.group()) ## advance in tree string by however many characters it took to encode branch length if data[i] == ',' or data[i] == ')': ## look for bifurcations or clade ends i+=1 ## advance in tree string cur_node = cur_node.up if data[i] == ';': ## look for string end return cur_node break ## end loop def parse_nexus(tree_path, treestring_regex=r'tree [A-Za-z\_]+([0-9]+)', verbose=False): """ Parses the BEAST MCC tree (NEXUS format) Parameters ---------- tree_path : string or file handle open for reading The nexus tree file treestring_regex : string The regex to match the tree string in the nexus file (the really long string which typically starts with "tree" and looks similar to a newick tree) verbose : bool, optional (default: False) Should output be printed? Raises ------ AssertionError If the tree was not correctly parsed Returns ------- A tree with BEAST attrs set on each node (as applicable) Author: Gytis Dudas """ tipFlag=False tips={} tipNum=0 tree=None if isinstance(tree_path,str): ## determine if path or handle was provided to function try: handle=open_file(tree_path,'r') except FileNotFoundError: print("FATAL: No such file {}".format(tree_path)) sys.exit(2) else: handle=tree_path for line in handle: ## iterate over lines l=line.strip('\n') nTaxa=re.search(r'dimensions ntax=([0-9]+);',l.lower()) ## get number of tips that should be in tree if nTaxa is not None: tipNum=int(nTaxa.group(1)) if verbose: print('File should contain %d taxa'%(tipNum)) treeString=re.search(treestring_regex,l) ## search for line with the tree if treeString is not None: treeString_start=l.index('(') ## find index of where tree string starts tree=parse_beast_tree(l[treeString_start:], tipMap=tips, verbose=verbose) ## parse tree string if verbose: print('Identified tree string') if tipFlag==True: ## going through tip encoding block tipEncoding=re.search(r'([0-9]+) ([A-Za-z\-\_\/\.\'0-9 \|?]+)',l) ## search for key:value pairs if tipEncoding is not None: tips[tipEncoding.group(1)]=tipEncoding.group(2).strip('"').strip("'") ## add to tips dict if verbose==True: print('Identified tip translation %s: %s'%(tipEncoding.group(1),tips[tipEncoding.group(1)])) elif ';' not in l: print('tip not captured by regex:',l.replace('\t','')) if 'translate' in l.lower(): ## tip encoding starts on next line tipFlag=True if ';' in l: tipFlag=False assert tree,'Tree not captured by regex' assert tree.count_terminals()==tipNum,'Not all tips have been parsed.' print("Success parsing BEAST nexus") try: return Phylo.BaseTree.Tree.from_clade(tree) except RecursionError as err: print("FATAL ERROR") print("Recursion limit reached. You can try raising this with the `--recursion-limit` option") print("(Be careful with this). Your current limit is set to {}".format(sys.getrecursionlimit())) sys.exit(2) def summarise_parsed_traits(tree): """ Parameters ---------- tree : """ traits = {} for node in tree.find_clades(): for attr in node.attrs: if attr not in traits: traits[attr] = [0, 0] if node.is_terminal(): traits[attr][1] += 1 else: traits[attr][0] += 1 print("\nParsed BEAST traits:") print("{: <20}{: <12}{: <12}".format("name", "n(internal)", "n(terminal)")) for trait in traits: print("{: <20}{: <12}{: <12}".format(trait, traits[trait][0], traits[trait][1])) print("\n") def fake_alignment(T): """ Fake alignment to appease treetime when only using it for naming nodes... This is lifted from refine.py and ideally could be imported Parameters ------- T : Returns ------- """ from Bio import SeqRecord, Seq, Align seqs = [] for n in T.get_terminals(): seqs.append(SeqRecord.SeqRecord(seq=Seq.Seq('ACGT'), id=n.name, name=n.name, description='')) aln = Align.MultipleSeqAlignment(seqs) return aln def get_root_date_offset(tree): """ years from most recent tip of the root """ greatest_dist2root = 0 for leaf in tree.get_terminals(): if leaf.dist2root > greatest_dist2root: greatest_dist2root = leaf.dist2root return greatest_dist2root def find_most_recent_tip(tree, tip_date_regex, tip_date_format, tip_date_delimeter): """ Find the most recent tip in the tree Parameters -------- tree : tip_date_regex : string The regex used to extract the date (e.g. isolate collection date from each tip in the string. default: hyphen delimited numbers at the end of tip name tip_date_format : string The format of the extracted date. (e.g. "%Y-%m-%d" goes with "2012-10-30") tip_date_delimeter : string The delimeter in `tip_date_format` Raises ------ AssertionError If any tips were not matched by the regex Returns ------- float The date of the most recent tip in the tree in decimal format Author: Gytis Dudas """ def decimalDate(date, date_fmt, variable=False): """ Converts calendar dates in specified format to decimal date. """ if variable==True: ## if date is variable - extract what is available dateL=len(date.split(tip_date_delimeter)) if dateL==2: date_fmt=tip_date_delimeter.join(date_fmt.split(tip_date_delimeter)[:-1]) elif dateL==1: date_fmt=tip_date_delimeter.join(date_fmt.split(tip_date_delimeter)[:-2]) adatetime=dt.datetime.strptime(date,date_fmt) ## convert to datetime object year = adatetime.year ## get year boy = dt.datetime(year, 1, 1) ## get beginning of the year eoy = dt.datetime(year + 1, 1, 1) ## get beginning of next year return year + ((adatetime - boy).total_seconds() / ((eoy - boy).total_seconds())) ## return fractional year leaf_names=[leaf.name for leaf in tree.get_terminals()] ## get names of tips date_regex=re.compile(tip_date_regex) ## regex pattern regex_matches=[date_regex.search(leaf) for leaf in leaf_names] ## search tips with regex assert regex_matches.count(None)==0,'These tip dates were not captured by regex %s: %s'%(tip_date_regex,', '.join([leaf for leaf in leaf_names if date_regex.search(leaf)==None])) ## number of tips should match number of regex matches decimal_dates=[decimalDate(date_regex.search(leaf).group(), date_fmt=tip_date_format, variable=True) for leaf in leaf_names] ## convert tip calendar dates to decimal dates return max(decimal_dates) ## return highest tip date def calc_tree_dates(tree, most_recent_tip_date, tip_date_regex, tip_date_format, tip_date_delimeter): """ Extract date information from the tree Parameters -------- tree : # time_units : string # tip_date : null | string # most_recent_tip_data_fmt : string {"regex" | "decimal"} most_recent_tip_date: numeric tip_date_regex: string tip_date_format: string tip_date_delimeter: string Returns -------- tuple [0] : float The root date offset [1] : float The date of the most recent tip in the tree TODO: Time units are taken as years, but days are also common for BEAST analysis """ if most_recent_tip_date: most_recent_tip = float(most_recent_tip_date) print("Using {:.2f} as the most recent tip date".format(most_recent_tip)) else: most_recent_tip = find_most_recent_tip(tree, tip_date_regex, tip_date_format, tip_date_delimeter) print("Inferred {:.2f} as the most recent tip date".format(most_recent_tip)) # time units need to be adjusted by the most recent tip date root_date_offset = get_root_date_offset(tree) print("Tree root is {:.2f} years prior to most recent tip".format(root_date_offset)) print("Temporal phylogeny spans {:.2f} - {:.2f}".format(most_recent_tip-root_date_offset, most_recent_tip)) return (root_date_offset, most_recent_tip) def collect_node_data(tree, root_date_offset, most_recent_tip_date): """ Collect & summarise the BEAST traits included on the tree in a format applicable for augur to use (i.e. the "node_data.json" file). Parameters -------- tree : root_date_offset : float most_recent_tip_date : float Returns -------- dict the keys are dependent on the content of the BEAST input """ # Example of a typical tree time export which we need to emulate: # "branch_length": 0.0032664876882838745, # "numdate": 2015.3901042843218, # "clock_length": 0.0032664876882838745, # "mutation_length": 0.003451507603103053, # "date": "2015-05-23", # "num_date_confidence": [2015.032, 2015.6520] node_data = {} root_date = most_recent_tip_date - root_date_offset def exclude_trait(name): if 'length' in name or 'height' in name: return True return False def set_node_date_confidence(node): if "height_confidence" in node.attrs: ## convert beast 95% HPDs into decimal date confidences node_data[node.name]['num_date_confidence'] = [most_recent_tip_date - height for height in n.attrs['height_confidence']] for n in tree.find_clades(): node_data[n.name] = {attr: n.attrs[attr] for attr in n.attrs if not exclude_trait(attr)} ## add all "valid" beast tree traits node_data[n.name]['num_date'] = root_date + n.dist2root ## num_date is decimal date of node node_data[n.name]['clock_length'] = n.branch_length ## assign BEAST branch length as regular branch length if n.is_terminal(): node_data[n.name]['posterior'] = 1.0 ## assign posterior of 1.0 to every tip (for aesthetics) else: set_node_date_confidence(n) return node_data def compute_entropies_for_discrete_traits(tree): """ Computes entropies for discrete traits. Discrete traits are assumed to be those where the value is a dictionary. This will set a "entropy" value for each identified discrete trait on all applicable nodes in the tree. Properties ---------- tree : BEAST traits are set as key-value pairs on node.attrs Author: James Hadfield """ alphabets = defaultdict(list) ## store alphabets for clade in tree.find_clades(): ## iterate over branches for attr in [key for key in clade.attrs if isinstance(clade.attrs[key], dict)]: ## iterate over branch attributes for val in clade.attrs[attr]: ## iterate over attribute values of the node if val not in alphabets[attr]: ## not seen this attribute value before alphabets[attr].append(val) alphabets.default_factory = None for clade in tree.find_clades(): ## iterate over branches for trait in alphabets: ## iterate over traits if trait in clade.attrs: ## branch has trait (in case there's a leaf-node difference in trait presence) trait_name=trait.split('_')[0] ## extract trait name root pdis=np.array([clade.attrs[trait][state] if state in clade.attrs[trait] else 0.0 for state in alphabets[trait]]) ## create state profile clade.attrs['%s_entropy'%(trait_name)] = -np.sum(pdis*np.log(pdis+1e-10)) ## compute entropy for trait def print_what_to_do_next(nodes, mcc_path, tree_path, node_data_path): """ Print a suggested `auspice_config.json` file, which the user will have to configure and provide to `augur export`. There is not enough information in a MCC tree to do this automatically. """ def include_key(k): exclude_list = ["clock_length"] return (not k.endswith("_confidence") and not k.endswith("_entropy") and k not in exclude_list) attrs = set() for node in nodes: attrs.update({k for k in nodes[node].keys() if include_key(k)}) def make_color_block(attr): if attr == "num_date": menuItem = "Sampling Date" else: menuItem = attr return {"menuItem": menuItem, "legendTitle": menuItem, "type": "continuous"} auspice_config = { "title": "Title for auspice to display", "color_options": {attr: make_color_block(attr) for attr in attrs}, "defaults": {"colorBy": "num_date"}, "maintainer": ["author names (displayed in footer)", "author URL"], "panels": ["tree"], # "updated": "date (displayed in footer)", } print("\n---------------------------------------------------------") print("Successfully parsed BEAST MCC tree {}".format(mcc_path)) print("Files produced:\n\t{}\n\t{}".format(tree_path, node_data_path)) print("\n") print("For `augur export v2` (or similar) you will need to provide a `auspice_config.json` file, which we cannot automatically generate. This file is typically placed in `config/auspice_config.json`. Here is a template:\n") print(json.dumps(auspice_config, indent=4)) print("\nYou can continue further analysis using augur, or export JSONs for auspice.") print("Here is an example of the command to export the data without further analysis (see `augur export -h` for more options)") print("\n`augur export v2 --tree {tree} --node-data {nd} --auspice-config --output auspice/.json`".format(tree=tree_path, nd=node_data_path)) print("---------------------------------------------------------") def run(args): ''' BEAST MCC tree to newick and node-data JSON for further augur processing / export ''' verbose = args.verbose print("importing from BEAST MCC tree", args.mcc) if args.recursion_limit: print("Setting recursion limit to %d"%(args.recursion_limit)) sys.setrecursionlimit(args.recursion_limit) # node data is the dict that will be exported as json node_data = { 'comment': "Imported from a BEAST MCC tree using `augur import beast`", 'mcc_file': args.mcc } tree = parse_nexus(tree_path=args.mcc, verbose=args.verbose) summarise_parsed_traits(tree) # Phylo.draw_ascii(tree) # instantiate treetime for the sole reason to name internal nodes (!) # note that tt.tree = tree, and this is modified in-place by this function tt = TreeAnc(tree=tree, aln=fake_alignment(tree), ref=None, gtr='JC69', verbose=1) # extract date information from the tree root_date_offset, most_recent_tip = calc_tree_dates(tree, args.most_recent_tip_date, args.tip_date_regex, args.tip_date_format, args.tip_date_delimeter) compute_entropies_for_discrete_traits(tree) node_data['nodes'] = collect_node_data(tree, root_date_offset, most_recent_tip) tree_success = Phylo.write(tree, args.output_tree, 'newick', format_branch_length='%1.8f') json_success = write_json(node_data, args.output_node_data) print_what_to_do_next(nodes=node_data['nodes'], mcc_path=args.mcc, tree_path=args.output_tree, node_data_path=args.output_node_data) augur-24.2.2/augur/index.py000066400000000000000000000173751456376326500155660ustar00rootroot00000000000000"""Count occurrence of bases in a set of sequences. """ from itertools import combinations import sys import csv from .io.file import open_file from .io.sequences import read_sequences from .io.vcf import is_vcf from treetime.vcf_utils import read_vcf DELIMITER = '\t' ID_COLUMN = 'strain' def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("index", help=__doc__) parser.add_argument('--sequences', '-s', required=True, help="sequences in FASTA or VCF formats. Augur will summarize the content of FASTA sequences and only report the names of strains found in a given VCF.") parser.add_argument('--output', '-o', help="tab-delimited file containing the number of bases per sequence in the given file. Output columns include strain, length, and counts for A, C, G, T, N, other valid IUPAC characters, ambiguous characters ('?' and '-'), and other invalid characters.", required=True) parser.add_argument('--verbose', '-v', action="store_true", help="print index statistics to stdout") return parser def index_vcf(vcf_path, index_path): """Create an index with a list of strain names from a given VCF. We do not calculate any statistics for VCFs. Parameters ---------- vcf_path : str or `os.PathLike` path to a VCF file to index. index_path : str or `os.PathLike` path to a tab-delimited file containing the composition details for each sequence in the given input file. Returns ------- int : number of strains indexed """ strains = list(read_vcf(vcf_path)['sequences'].keys()) num_of_seqs = 0 with open_file(index_path, 'wt') as out_file: tsv_writer = csv.writer(out_file, delimiter = DELIMITER) #write header i output file header = [ID_COLUMN] tsv_writer.writerow(header) for record in strains: tsv_writer.writerow([record]) num_of_seqs += 1 return num_of_seqs def index_sequence(sequence, values): """Count the number of nucleotides for a given sequence record. Parameters ---------- sequence : Bio.SeqRecord.SeqRecord sequence record to index. values : list of set of str values to count; sets must be non-overlapping and contain only single-character, lowercase strings Returns ------- list : summary of the given sequence's strain name, length, nucleotide counts for the given values, and a final column with the number of characters that didn't match any of those in the given values. Examples -------- >>> import Bio >>> other_IUPAC = {'r', 'y', 's', 'w', 'k', 'm', 'd', 'h', 'b', 'v'} >>> values = [{'a'},{'c'},{'g'},{'t'},{'n'}, other_IUPAC, {'-'}, {'?'}] >>> sequence_a = Bio.SeqRecord.SeqRecord(seq=Bio.Seq.Seq("ACTGN-?XWN"), id="seq_A") >>> index_sequence(sequence_a, values) ['seq_A', 10, 1, 1, 1, 1, 2, 1, 1, 1, 1] >>> sequence_b = Bio.SeqRecord.SeqRecord(seq=Bio.Seq.Seq("ACTGACTG"), id="seq_B") >>> index_sequence(sequence_b, values) ['seq_B', 8, 2, 2, 2, 2, 0, 0, 0, 0, 0] Characters in the given sequence that are not in the given list of values to count get counted in the final column. >>> sequence_c = Bio.SeqRecord.SeqRecord(seq=Bio.Seq.Seq("ACTG%@!!!NN"), id="seq_C") >>> index_sequence(sequence_c, values) ['seq_C', 11, 1, 1, 1, 1, 2, 0, 0, 0, 5] The list of value sets must not overlap. >>> sequence_d = Bio.SeqRecord.SeqRecord(seq=Bio.Seq.Seq("A!C!TGXN"), id="seq_D") >>> index_sequence(sequence_d, [set('actg'), set('xn'), set('n')]) # doctest: +ELLIPSIS Traceback (most recent call last): ... ValueError: character sets ... and {'n'} overlap: {'n'} Value sets must contain only single-character, lowercase strings. >>> index_sequence(sequence_d, [{'a'}, {'c'}, {'T'}, {'g'}]) Traceback (most recent call last): ... ValueError: character set {'T'} contains a non-lowercase character: 'T' >>> index_sequence(sequence_d, [{'actg'}]) Traceback (most recent call last): ... ValueError: character set {'actg'} contains a multi-character (or maybe zero-length) string: 'actg' >>> index_sequence(sequence_d, [{'a', 'c'}, {0, 1}]) Traceback (most recent call last): ... ValueError: character set {0, 1} contains a non-string element: 0 """ # Sets must be non-overlapping and contain only single-character, lowercase # strings, otherwise our assumptions are broken. This is not much hardship # on the caller. for v in values: for c in v: if not isinstance(c, str): raise ValueError(f"character set {v!r} contains a non-string element: {c!r}") if len(c) != 1: raise ValueError(f"character set {v!r} contains a multi-character (or maybe zero-length) string: {c!r}") if c != c.lower(): raise ValueError(f"character set {v!r} contains a non-lowercase character: {c!r}") for a, b in combinations(values, 2): if not a.isdisjoint(b): raise ValueError(f"character sets {a!r} and {b!r} overlap: {a & b!r}") counts = [] seq = sequence.seq.lower() l = len(seq) for v in values: counts.append(sum(map(lambda x: seq.count(x), v))) invalid_nucleotides = l-sum(counts) row = [sequence.id, l]+counts+[invalid_nucleotides] return row def index_sequences(sequences_path, sequence_index_path): """Count the number of A, C, T, G, N, other IUPAC nucleotides, ambiguous bases ("?" and "-"), and other invalid characters in a set of sequences and write the composition as a data frame to the given sequence index path. Parameters ---------- sequences_path : str or `os.PathLike` path to a sequence file to index. sequence_index_path : str or `os.PathLike` path to a tab-delimited file containing the composition details for each sequence in the given input file. Returns ------- int : number of sequences indexed int : total length of sequences indexed """ seqs = read_sequences(sequences_path) other_IUPAC = {'r', 'y', 's', 'w', 'k', 'm', 'd', 'h', 'b', 'v'} values = [{'a'},{'c'},{'g'},{'t'},{'n'},other_IUPAC,{'-'},{'?'}] labels = ['A','C','G','T','N','other_IUPAC','-','?'] tot_length = 0 num_of_seqs = 0 with open_file(sequence_index_path, 'wt') as out_file: tsv_writer = csv.writer(out_file, delimiter = '\t', lineterminator='\n') #write header i output file header = [ID_COLUMN, 'length']+labels+['invalid_nucleotides'] tsv_writer.writerow(header) for record in seqs: #index the sequence and write row in output file row = index_sequence(record, values) tsv_writer.writerow(row) tot_length += row[1] num_of_seqs += 1 return num_of_seqs, tot_length def run(args): ''' runs index_sequences which counts the number of A, C, T, G, N, other IUPAC nucleotides, ambiguous bases ("?" and "-"), and other invalid characters in a set of sequences and write the composition as a data frame to the given sequence index path. ''' try: if is_vcf(args.sequences): num_of_seqs = index_vcf(args.sequences, args.output) tot_length = None else: num_of_seqs, tot_length = index_sequences(args.sequences, args.output) except FileNotFoundError: print(f"ERROR: Could not open sequences file '{args.sequences}'.", file=sys.stderr) return 1 if args.verbose: if tot_length: print("Analysed %i sequences with an average length of %i nucleotides." % (num_of_seqs, int(tot_length / num_of_seqs))) else: print("Analysed %i sequences" % num_of_seqs) augur-24.2.2/augur/io/000077500000000000000000000000001456376326500144775ustar00rootroot00000000000000augur-24.2.2/augur/io/__init__.py000066400000000000000000000006621456376326500166140ustar00rootroot00000000000000"""Interfaces for reading and writing data also known as input/output (I/O) """ # Functions and variables exposed here are part of Augur's public Python API. # To use functions internally, import directly from the submodule. from .file import open_file # noqa: F401 from .metadata import read_metadata # noqa: F401 from .sequences import read_sequences, write_sequences # noqa: F401 from .strains import read_strains # noqa: F401 augur-24.2.2/augur/io/file.py000066400000000000000000000033501456376326500157710ustar00rootroot00000000000000import os from contextlib import contextmanager from io import IOBase from textwrap import dedent from xopen import PipedCompressionReader, PipedCompressionWriter, xopen from augur.errors import AugurError ENCODING = "utf-8" PANDAS_READ_CSV_OPTIONS = { 'encoding': ENCODING, } @contextmanager def open_file(path_or_buffer, mode="r", **kwargs): """Opens a given file path and returns the handle. Transparently handles compressed inputs and outputs. Parameters ---------- path_or_buffer Name of the file to open or an existing IO buffer mode : str Mode to open file (read or write) Returns ------- IO File handle object """ # Read all files using a specific encoding. kwargs['encoding'] = ENCODING if isinstance(path_or_buffer, (str, os.PathLike)): try: with xopen(path_or_buffer, mode, **kwargs) as handle: yield handle except UnicodeDecodeError as e: # TODO: Consider moving this to the top-level error handler to # handle errors from other I/O functions such as pandas.read_csv. # This is not trivial since the filepath is useful to include in the # message, but is not available through UnicodeDecodeError alone. raise AugurError(dedent(f"""\ File {path_or_buffer!r} contains {e.object[e.start:e.end]!r} which is not valid in the expected {e.encoding!r} encoding. Try re-saving the file using the {e.encoding!r} encoding.""")) elif isinstance(path_or_buffer, (IOBase, PipedCompressionReader, PipedCompressionWriter)): yield path_or_buffer else: raise TypeError(f"Type {type(path_or_buffer)} is not supported.") augur-24.2.2/augur/io/json.py000066400000000000000000000251341456376326500160270ustar00rootroot00000000000000""" This file, augur/io/json.py, started as a copy of lib/id3c/json.py and the functions shorten_left(), contextualize_char(), and mark_char() from lib/id3c/utils.py in the https://github.com/seattleflu/id3c repo as of commit 911e7d7bfccc4d050e63e6f73d7a7e59fa1a80e8, licensed under the MIT License. Subsequent modifications (as recorded in Augur's own version control history) are licensed under the same terms as the rest of Augur, the GNU AGPL 3.0. The LICENSE file included in ID3C's repo is copied below verbatim:: MIT License Copyright (c) 2018 Brotman Baty Institute Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. """ import json from datetime import datetime from typing import Iterable from uuid import UUID def as_json(value): """ Converts *value* to a JSON string using our custom :class:`JsonEncoder`. """ return json.dumps(value, allow_nan = False, cls = JsonEncoder) def load_json(value): """ Converts *value* from a JSON string with better error messages. Raises an :exc:`augur.io.json.JSONDecodeError` which provides improved error messaging, compared to :exc:`json.JSONDecodeError`, when stringified. """ try: return json.loads(value) except json.JSONDecodeError as e: raise JSONDecodeError(e) from e def dump_ndjson(iterable: Iterable) -> None: """ :func:`print` *iterable* as a set of newline-delimited JSON records. """ for item in iterable: print(as_json(item)) def load_ndjson(file: Iterable[str], ignore_empty_lines = True) -> Iterable: """ Load newline-delimited JSON records from *file*. Ignore empty lines in the file by default. """ for line in file: # Skip empty lines when requested if ignore_empty_lines and not line.strip(): continue yield load_json(line) class JsonEncoder(json.JSONEncoder): """ Encodes Python values into JSON for non-standard objects. """ def __init__(self, *args, **kwargs): """ Disallows the floating point values NaN, Infinity, and -Infinity. Python's :class:`json` allows them by default because they work with JSON-as-JavaScript, but they don't work with spec-compliant JSON parsers. """ kwargs["allow_nan"] = False super().__init__(*args, **kwargs) def default(self, value): """ Returns *value* as JSON or raises a TypeError. Serializes: * :class:`~datetime.datetime` using :meth:`~datetime.datetime.isoformat()` * :class:`~uuid.UUID` using ``str()`` """ if isinstance(value, datetime): return value.isoformat() elif isinstance(value, UUID): return str(value) else: # Let the base class raise the TypeError return super().default(value) class JSONDecodeError(json.JSONDecodeError): """ Subclass of :class:`json.JSONDecodeError` which contextualizes the stringified error message by including a snippet of the JSON source input. Typically you won't need to ever reference this class directly. It will be raised by :func:`load_json` and be caught by except blocks which catch the standard :class:`json.JSONDecodeError`. Examples -------- >>> load_json('{foo: "bar"}') Traceback (most recent call last): ... augur.io.json.JSONDecodeError: Expecting property name enclosed in double quotes: line 1 column 2 (char 1): '{▸▸▸f◂◂◂oo: "bar"}' >>> load_json('not json') Traceback (most recent call last): ... augur.io.json.JSONDecodeError: Expecting value: line 1 column 1 (char 0): 'not json' >>> load_json("[0, 1, 2, 3, 4, 5") Traceback (most recent call last): ... augur.io.json.JSONDecodeError: Expecting ',' delimiter: line 1 column 18 (char 17): unexpected end of document: '…, 3, 4, 5' >>> load_json("[\\n") Traceback (most recent call last): ... augur.io.json.JSONDecodeError: Expecting value: line 2 column 1 (char 2): unexpected end of document: '[\\n' >>> load_json("\\n") Traceback (most recent call last): ... augur.io.json.JSONDecodeError: Expecting value: line 2 column 1 (char 1): unexpected end of document: '\\n' >>> load_json('') Traceback (most recent call last): ... augur.io.json.JSONDecodeError: Expecting value: line 1 column 1 (char 0): (empty source document) """ CONTEXT_LENGTH = 10 def __init__(self, exc: json.JSONDecodeError): super().__init__(exc.msg, exc.doc, exc.pos) def __str__(self): error = super().__str__() if self.doc: if self.pos == 0 and self.msg == "Expecting value": # Most likely not a JSON document at all, so show the whole thing. context = repr(self.doc) elif self.pos > 0 and self.pos == len(self.doc): context = "unexpected end of document: " + repr(shorten_left(self.doc, self.CONTEXT_LENGTH, "…")) else: context = repr(contextualize_char(self.doc, self.pos, self.CONTEXT_LENGTH)) else: context = "(empty source document)" return f"{error}: {context}" def shorten_as_json(value, length, placeholder) -> str: """ Converts *value* to JSON with :py:func:`as_json` and then truncates it to a maximum *length* (if necessary), indicating truncation with the given *placeholder*. >>> shorten_as_json({'hello': 'world', 'x': 42}, 100, '…') '{"hello": "world", "x": 42}' >>> shorten_as_json({'hello': 'world', 'x': 42}, 21, '…') '{"hello": "world", …}' For readability, the outermost JSON value delimiter at the right hand side, i.e. ``}``, ``]``, or ``"``, is preserved, such that *placeholder* will put placed "inside" *value*'s JSON representation. >>> shorten_as_json([1,2,3,'four',5,6], 20, '…') '[1, 2, 3, "four", …]' >>> shorten_as_json([1,2,3,'four',5,6], 15, '…') '[1, 2, 3, "fo…]' The maximum *length* must be at least two characters longer than the length of the *placeholder*. >>> shorten_as_json({'foo': 'bar'}, 4, '...') Traceback (most recent call last): ... ValueError: maximum length (4) must be two greater than length of placeholder (3), i.e. at least 5 >>> shorten_as_json({'foo': 'bar'}, 5, '...') '{...}' """ min_length = len(placeholder) + 2 if length < min_length: raise ValueError(f"maximum length ({length}) must be two greater than length of placeholder ({len(placeholder)}), i.e. at least {min_length}") json_value = as_json(value) if len(json_value) > length: return json_value[0:length - len(placeholder) - 1] + placeholder + json_value[-1:] else: return json_value def shorten_left(text, length, placeholder): """ Truncate the left end of *text* to a maximum *length* (if necessary), indicating truncation with the given *placeholder*. The maximum *length* must be longer than the length of the *placeholder*. Behaviour is slightly different than :py:func:`textwrap.shorten` which is intended for shortening sentences and works at the word, not character, level. Examples -------- >>> shorten_left("foobar", 6, "...") 'foobar' >>> shorten_left("foobarbaz", 6, "...") '...baz' >>> shorten_left("foobar", 3, "...") Traceback (most recent call last): ... ValueError: maximum length (3) must be greater than length of placeholder (3) """ if length <= len(placeholder): raise ValueError(f"maximum length ({length}) must be greater than length of placeholder ({len(placeholder)})") if len(text) > length: return placeholder + text[-(length - len(placeholder)):] else: return text def contextualize_char(text, idx, context = 10): """ Marks the *idx* char in *text* and snips out a surrounding amount of *context*. Avoids making a copy of *text* before snipping, in case *text* is very large. Examples -------- >>> contextualize_char('hello world', 0, context = 4) '▸▸▸h◂◂◂ello…' >>> contextualize_char('hello world', 5, context = 3) '…llo▸▸▸ ◂◂◂wor…' >>> contextualize_char('hello world', 5, context = 100) 'hello▸▸▸ ◂◂◂world' >>> contextualize_char('hello world', 10) 'hello worl▸▸▸d◂◂◂' >>> contextualize_char('hello world', 2, context = 0) '…▸▸▸l◂◂◂…' >>> contextualize_char('hello world', 11) Traceback (most recent call last): ... IndexError: string index out of range """ if context < 0: raise ValueError("context must be positive") start = max(0, idx - context) end = min(len(text), idx + context + 1) idx = min(idx, context) start_placeholder = "…" if start > 0 else "" end_placeholder = "…" if end < len(text) else "" return start_placeholder + mark_char(text[start:end], idx) + end_placeholder def mark_char(text, idx): """ Prominently marks the *idx* char in *text*. Examples -------- >>> mark_char('hello world', 0) '▸▸▸h◂◂◂ello world' >>> mark_char('hello world', 2) 'he▸▸▸l◂◂◂lo world' >>> mark_char('hello world', 10) 'hello worl▸▸▸d◂◂◂' >>> mark_char('hello world', 11) Traceback (most recent call last): ... IndexError: string index out of range >>> mark_char('', 0) Traceback (most recent call last): ... IndexError: string index out of range """ return text[0:idx] + '▸▸▸' + text[idx] + '◂◂◂' + text[idx+1:] augur-24.2.2/augur/io/metadata.py000066400000000000000000000566711456376326500166500ustar00rootroot00000000000000import csv import os from typing import Iterable, Sequence import pandas as pd import pyfastx import sys from io import StringIO from itertools import chain from augur.errors import AugurError from augur.io.print import print_err from augur.types import DataErrorMethod from .file import PANDAS_READ_CSV_OPTIONS, open_file DEFAULT_DELIMITERS = (',', '\t') DEFAULT_ID_COLUMNS = ("strain", "name") METADATA_DATE_COLUMN = 'date' class InvalidDelimiter(Exception): pass def read_metadata(metadata_file, delimiters=DEFAULT_DELIMITERS, columns=None, id_columns=DEFAULT_ID_COLUMNS, chunk_size=None, dtype=None): r"""Read metadata from a given filename and into a pandas `DataFrame` or `TextFileReader` object. Parameters ---------- metadata_file : str Path to a metadata file to load. delimiters : list of str List of possible delimiters to check for between columns in the metadata. Only one delimiter will be inferred. columns : list of str List of columns to read. If unspecified, read all columns. id_columns : list of str List of possible id column names to check for, ordered by priority. Only one id column will be inferred. chunk_size : int Size of chunks to stream from disk with an iterator instead of loading the entire input file into memory. dtype : dict or str Data types to apply to columns in metadata. If unspecified, pandas data type inference will be used. See documentation for an argument of the same name to `pandas.read_csv()`. Returns ------- pandas.DataFrame or `pandas.io.parsers.TextFileReader` Raises ------ KeyError When the metadata file does not have any valid index columns. Examples -------- For standard use, request a metadata file and get a pandas DataFrame. >>> read_metadata("tests/functional/filter/data/metadata.tsv").index.values[0] 'COL/FLR_00024/2015' Requesting an index column that doesn't exist should produce an error. >>> read_metadata("tests/functional/filter/data/metadata.tsv", id_columns=("Virus name",)) Traceback (most recent call last): ... Exception: None of the possible id columns (('Virus name',)) were found in the metadata's columns ('strain', 'virus', 'accession', 'date', 'region', 'country', 'division', 'city', 'db', 'segment', 'authors', 'url', 'title', 'journal', 'paper_url') We also allow iterating through metadata in fixed chunk sizes. >>> for chunk in read_metadata("tests/functional/filter/data/metadata.tsv", chunk_size=5): ... print(chunk.shape) ... (5, 14) (5, 14) (2, 14) """ kwargs = { "sep": _get_delimiter(metadata_file, delimiters), "engine": "c", "skipinitialspace": True, "na_filter": False, "low_memory": False, } if chunk_size: kwargs["chunksize"] = chunk_size # Inspect the first chunk of the metadata, to find any valid index columns. metadata = pd.read_csv( metadata_file, iterator=True, **kwargs, **PANDAS_READ_CSV_OPTIONS, ) chunk = metadata.read(nrows=1) metadata.close() id_columns_present = [ id_column for id_column in id_columns if id_column in chunk.columns ] # If we couldn't find a valid index column in the metadata, alert the user. if not id_columns_present: raise Exception(f"None of the possible id columns ({id_columns!r}) were found in the metadata's columns {tuple(chunk.columns)!r}") else: index_col = id_columns_present[0] # If we found a valid column to index the DataFrame, specify that column. kwargs["index_col"] = index_col if columns is not None: # Load a subset of the columns. for requested_column in list(columns): if requested_column not in chunk.columns: # Ignore missing columns. Don't error since augur filter's # --exclude-where allows invalid columns to be specified (they # are just ignored). print_err(f"WARNING: Column '{requested_column}' does not exist in the metadata file. Ignoring it.") columns.remove(requested_column) # NOTE: list()+remove() is not very efficient, but (1) it's easy # to understand and (2) this is unlikely to be used with large # lists. kwargs["usecols"] = columns if dtype is None: dtype = {} if isinstance(dtype, dict): # Avoid reading numerical IDs as integers. dtype["index_col"] = "string" # Avoid reading year-only dates as integers. dtype[METADATA_DATE_COLUMN] = "string" elif isinstance(dtype, str): if dtype != "string": raise AugurError(f""" dtype='{dtype}' converts values in all columns to be of type '{dtype}'. However, values in columns '{index_col}' and '{METADATA_DATE_COLUMN}' must be treated as strings in Augur. Specify dtype as a dict per column instead. """) else: raise AugurError(f"Unsupported value for dtype: '{dtype}'") kwargs["dtype"] = dtype return pd.read_csv( metadata_file, **kwargs, **PANDAS_READ_CSV_OPTIONS, ) def read_table_to_dict(table, delimiters, duplicate_reporting=DataErrorMethod.ERROR_FIRST, id_column=None): """ Read rows from *table* file and yield each row as a single dict. Will report duplicate records based on the *id_column* if requested via *duplicate_reporting* after the generator has been exhausted. Parameters ---------- table: str Path to a CSV or TSV file or IO buffer delimiters : list of str List of possible delimiters to check for between columns in the metadata. Only one delimiter will be inferred. duplicate_reporting: DataErrorMethod, optional How should duplicate records be reported id_column: str, optional Name of the column that contains the record identifier used for reporting duplicates. Uses the first column of the metadata if not provided. Yields ------ dict: The parsed row as a single record Raises ------ AugurError Raised for any of the following reasons: 1. There are parsing errors from the csv standard library 2. The provided *id_column* does not exist in the *metadata* 3. The *duplicate_reporting* method is set to ERROR_FIRST or ERROR_ALL and duplicate(s) are found """ seen_ids = set() duplicate_ids = set() with open_file(table) as handle: # Get sample to determine delimiter table_sample = handle.readline() if handle.seekable(): handle.seek(0) else: table_sample_file = StringIO(table_sample) handle = chain(table_sample_file, handle) try: # Note: this sort of duplicates _get_delimiter(), but it's easier if # this is separate since it handles non-seekable buffers. dialect = csv.Sniffer().sniff(table_sample, delimiters) except csv.Error as error: # This assumes all csv.Errors imply a delimiter issue. That might # change in a future Python version. raise InvalidDelimiter from error metadata_reader = csv.DictReader(handle, dialect=dialect) if duplicate_reporting is DataErrorMethod.SILENT: # Directly yield from metadata reader since we do not need to check for duplicate ids yield from metadata_reader else: if id_column is None: id_column = metadata_reader.fieldnames[0] for record in metadata_reader: record_id = record.get(id_column) if record_id is None: raise AugurError(f"The provided id column {id_column!r} does not exist in {table!r}.") if record_id in seen_ids: # Immediately raise an error if requested to error on the first duplicate if duplicate_reporting is DataErrorMethod.ERROR_FIRST: raise AugurError(f"Encountered record with duplicate id {record_id!r} in {table!r}") # Give immediate feedback on duplicates if requested to warn on duplicates # We'll also print a full summary of duplicates once the generator is exhausted if duplicate_reporting is DataErrorMethod.WARN: print_err(f"WARNING: Encountered record with duplicate id {record_id!r} in {table!r}") duplicate_ids.add(record_id) else: seen_ids.add(record_id) yield record if duplicate_reporting is not DataErrorMethod.SILENT and duplicate_ids: duplicates_message = f"The following records are duplicated in {table!r}:\n" + "\n".join(map(repr, sorted(duplicate_ids))) if duplicate_reporting is DataErrorMethod.WARN: print_err(f"WARNING: {duplicates_message}") elif duplicate_reporting is DataErrorMethod.ERROR_ALL: raise AugurError(duplicates_message) else: raise ValueError(f"Encountered unhandled duplicate reporting method: {duplicate_reporting!r}") def read_metadata_with_sequences(metadata, metadata_delimiters, fasta, seq_id_column, seq_field='sequence', unmatched_reporting=DataErrorMethod.ERROR_FIRST, duplicate_reporting=DataErrorMethod.ERROR_FIRST): """ Read rows from *metadata* file and yield each row as a single dict that has been updated with their corresponding sequence from the *fasta* file. Matches the metadata record with sequences using the sequence id provided in the *seq_id_column*. To ensure that the sequences can be matched with the metadata, the FASTA headers must contain the matching sequence id. The FASTA headers may include additional description parts after the id, but they will not be used to match the metadata. Will report unmatched records if requested via *unmatched_reporting*. Note the ERROR_FIRST method will raise an error at the first unmatched metadata record but not for an unmatched sequence record because we can only check for unmatched sequences after exhausting the metadata generator. Will report duplicate records if requested via *duplicate_reporting*. Reads the *fasta* file with `pyfastx.Fasta`, which creates an index for the file to allow random access of sequences via the sequence id. Will remove any existing index file named `.fxi` to force the rebuilding of the index so that there's no chance of using stale cached indexes. See pyfastx docs for more details: https://pyfastx.readthedocs.io/en/latest/usage.html#fasta Parameters ---------- metadata: str Path to a CSV or TSV metadata file metadata_delimiters : list of str List of possible delimiters to check for between columns in the metadata. fasta: str Path to a plain or gzipped FASTA file seq_id_column: str The column in the metadata file that contains the sequence id for matching sequences seq_field: str, optional The field name to use for the sequence in the updated record unmatched_reporting: DataErrorMethod, optional How should unmatched records be reported duplicate_reporting: DataErrorMethod, optional How should duplicate records be reported Yields ------ dict The parsed metadata record with the sequence """ # Remove the old Pyfastx index to force rebuild of index # so we don't have to worry about a stale cached index try: os.remove(f"{fasta}.fxi") except FileNotFoundError: pass sequences = pyfastx.Fasta(fasta) sequence_ids = set(sequences.keys()) # Used for determining unmatched records processed_sequence_ids = set() unmatched_metadata_ids = set() # Used for determining duplicate records processed_metadata_ids = set() duplicate_metadata_ids = set() duplicate_sequence_ids = set() # First check for duplicates in FASTA first since pyfastx will only return # the first sequence of duplicates, which may lead to unexpected results. # Look for duplicate sequence ids if the number of sequences does not match the number of unique ids if duplicate_reporting is not DataErrorMethod.SILENT and len(sequences) != len(sequence_ids): seen_sequence_ids = set() for seq_id in sequences.keys(): if seq_id in seen_sequence_ids: # Immediately raise an error if requested to error on the first duplicate if duplicate_reporting is DataErrorMethod.ERROR_FIRST: raise AugurError(f"Encountered sequence record with duplicate id {seq_id!r}.") # Give immediate feedback on duplicates if requested to warn on duplicates # We'll also print a full summary of duplicates at the end of the command if duplicate_reporting is DataErrorMethod.WARN: print_err(f"WARNING: Encountered sequence record with duplicate id {seq_id!r}.") duplicate_sequence_ids.add(seq_id) else: seen_sequence_ids.add(seq_id) # Silencing duplicate reporting here because we will need to handle duplicates # in both the metadata and FASTA files after processing all the records here. for record in read_table_to_dict(metadata, metadata_delimiters, duplicate_reporting=DataErrorMethod.SILENT): seq_id = record.get(seq_id_column) if seq_id is None: raise AugurError(f"The provided sequence id column {seq_id_column!r} does not exist in the metadata.") # Keep track of duplicate ids to report duplicate records if requested if seq_id in processed_metadata_ids: # Immediately raise an error if requested to error on the first duplicate if duplicate_reporting is DataErrorMethod.ERROR_FIRST: raise AugurError(f"Encountered metadata record with duplicate id {seq_id!r}.") # Give immediate feedback on duplicates if requested to warn on duplicates # We'll also print a full summary of duplicates at the end of the command if duplicate_reporting is DataErrorMethod.WARN: print_err(f"WARNING: Encountered metadata record with duplicate id {seq_id!r}.") duplicate_metadata_ids.add(seq_id) else: processed_metadata_ids.add(seq_id) try: sequence_record = sequences[seq_id] except KeyError: # Skip records that do not have a matching sequence # Immediately raise an error if requested to error on the first unmatched record if unmatched_reporting is DataErrorMethod.ERROR_FIRST: raise AugurError(f"Encountered metadata record {seq_id!r} without a matching sequence.") # Give immediate feedback on unmatched records if requested to warn on unmatched # We'll also print a full summary of unmatched records at the end of the command if unmatched_reporting is DataErrorMethod.WARN: print_err(f"WARNING: Encountered metadata record {seq_id!r} without a matching sequence.") # Save unmatched metadata ids to report unmatched records if requested unmatched_metadata_ids.add(seq_id) continue sequence_record = sequences[seq_id] record[seq_field] = str(sequence_record.seq).upper() # Save processed sequence ids to be able to determine if sequences were unmatched processed_sequence_ids.add(seq_id) yield record # Create summary of duplicate records if requested duplicates_message = None if duplicate_reporting is not DataErrorMethod.SILENT and (duplicate_metadata_ids or duplicate_sequence_ids): duplicates_message = "The output may not match expectations because there were records with duplicate sequence ids." if duplicate_metadata_ids: duplicates_message += f"\nThe following sequence ids were duplicated in {metadata!r}:\n" duplicates_message += "\n".join(map(repr, sorted(duplicate_metadata_ids))) if duplicate_sequence_ids: duplicates_message += f"\nThe following sequence ids were duplicated in {fasta!r}:\n" duplicates_message += "\n".join(map(repr, sorted(duplicate_sequence_ids))) # Create summary for unmatched records if requested # Note this is where we find unmatched sequences because we can only do so after looping through all of the metadata unmatched_message = None unmatched_sequence_ids = sequence_ids - processed_sequence_ids if unmatched_reporting is not DataErrorMethod.SILENT and (unmatched_metadata_ids or unmatched_sequence_ids): unmatched_message = "The output may be incomplete because there were unmatched records." if unmatched_metadata_ids: unmatched_message += "\nThe following metadata records did not have a matching sequence:\n" unmatched_message += "\n".join(map(repr, sorted(unmatched_metadata_ids))) if unmatched_sequence_ids: unmatched_message += "\nThe following sequence records did not have a matching metadata record:\n" unmatched_message += "\n".join(map(repr, sorted(unmatched_sequence_ids))) # Handle all the different combinations for warnings and errors for unmatched and duplicate records # Make sure we output warnings before raising any errors if duplicate_reporting is DataErrorMethod.WARN and duplicates_message is not None: print_err(f"WARNING: {duplicates_message}") if unmatched_reporting is DataErrorMethod.WARN and unmatched_message is not None: print_err(f"WARNING: {unmatched_message}") # Combine error messages so both messages can be included in the final error error_message = "" if duplicate_reporting is DataErrorMethod.ERROR_ALL and duplicates_message is not None: error_message += "\n" + duplicates_message # We need to check ERROR_FIRST here for unmatched sequences since we # need to process all metadata records to know which sequences are unmatched if unmatched_reporting in {DataErrorMethod.ERROR_FIRST, DataErrorMethod.ERROR_ALL} and unmatched_message is not None: error_message += "\n" + unmatched_message if error_message: raise AugurError(f"Encountered the following error(s) when parsing metadata with sequences:{error_message}") def write_records_to_tsv(records, output_file): """ Write each record from *records* as a single row to a TSV *output_file*. Uses the keys of the first record as output column names. Ignores extra keys in other records. If records are missing keys, they will have an empty string as the value. Parameters ---------- records: iterable of dict Iterator that yields dict that contains sequences output_file: str Path to the output TSV file. Accepts '-' to output TSV to stdout. """ # Use the keys of the first record as output fields try: first_record = next(records) except StopIteration: raise AugurError(f"Unable to write records to {output_file} because provided records were empty.") # Use the record keys as output columns since as of python 3.7 dicts retain insertion order output_columns = list(first_record.keys()) # Special case single hyphen as stdout if output_file == '-': output_file = sys.stdout with open_file(output_file, 'w', newline='') as output_metadata: tsv_writer = csv.DictWriter( output_metadata, output_columns, extrasaction='ignore', delimiter='\t', lineterminator='\n' ) tsv_writer.writeheader() tsv_writer.writerow(first_record) for record in records: tsv_writer.writerow(record) class Metadata: """Represents a metadata file.""" path: str """Path to the file on disk.""" delimiter: str """Inferred delimiter of metadata.""" columns: Sequence[str] """Columns extracted from the first row in the metadata file.""" id_column: str """Inferred ID column.""" def __init__(self, path: str, delimiters: Sequence[str], id_columns: Sequence[str]): """ Parameters ---------- path Path of the metadata file. delimiters Possible delimiters to use, in order of precedence. id_columns Possible ID columns to use, in order of precedence. """ self.path = path # Infer the dialect. self.delimiter = _get_delimiter(self.path, delimiters) # Infer the column names. with self.open() as f: reader = csv.reader(f, delimiter=self.delimiter) try: self.columns = next(reader) except StopIteration: raise AugurError(f"{self.path}: Expected a header row but it is empty.") # Infer the ID column. self.id_column = self._find_first(id_columns) def open(self, **kwargs): """Open the file with auto-compression/decompression.""" return open_file(self.path, **kwargs) def _find_first(self, columns: Sequence[str]): """Return the first column in `columns` that is present in the metadata. """ for column in columns: if column in self.columns: return column raise AugurError(f"{self.path}: None of ({columns!r}) are in the columns {tuple(self.columns)!r}.") def rows(self, strict: bool = True): """Yield rows in a dictionary format. Empty lines are ignored. Parameters ---------- strict If True, raise an error when a row contains more or less than the number of expected columns. """ with self.open() as f: reader = csv.DictReader(f, delimiter=self.delimiter, fieldnames=self.columns, restkey=None, restval=None) # Skip the header row. next(reader) # NOTE: Empty lines are ignored by csv.DictReader. # for row in reader: if strict: if None in row.keys(): raise AugurError(f"{self.path}: Line {reader.line_num} contains at least one extra column. The inferred delimiter is {self.delimiter!r}.") if None in row.values(): # This is distinct from a blank value (empty string). raise AugurError(f"{self.path}: Line {reader.line_num} is missing at least one column. The inferred delimiter is {self.delimiter!r}.") yield row def _get_delimiter(path: str, valid_delimiters: Iterable[str]): """Get the delimiter of a file given a list of valid delimiters.""" for delimiter in valid_delimiters: if len(delimiter) != 1: raise AugurError(f"Delimiters must be single-character strings. {delimiter!r} does not satisfy that condition.") with open_file(path) as file: try: # Infer the delimiter from the first line. return csv.Sniffer().sniff(file.readline(), "".join(valid_delimiters)).delimiter except csv.Error as error: # This assumes all csv.Errors imply a delimiter issue. That might # change in a future Python version. raise InvalidDelimiter from error augur-24.2.2/augur/io/print.py000066400000000000000000000001051456376326500162010ustar00rootroot00000000000000import sys def print_err(*args): print(*args, file=sys.stderr) augur-24.2.2/augur/io/sequences.py000066400000000000000000000074671456376326500170620ustar00rootroot00000000000000import Bio.SeqIO from augur.errors import AugurError from .file import open_file def read_sequences(*paths, format="fasta"): """Read sequences from one or more paths. Automatically infer compression mode (e.g., gzip, etc.) and return a stream of sequence records in the requested format (e.g., "fasta", "genbank", etc.). Parameters ---------- paths : list of str or `os.PathLike` One or more paths to sequence files of any type supported by BioPython. format : str Format of input sequences matching any of those supported by BioPython (e.g., "fasta", "genbank", etc.). Yields ------ Bio.SeqRecord.SeqRecord Sequence record from the given path(s). """ for path in paths: # Open the given path as a handle, inferring the file's compression. # This way we can pass a handle to BioPython's SeqIO interface # regardless of the compression mode. with open_file(path) as handle: sequences = Bio.SeqIO.parse(handle, format) for sequence in sequences: yield sequence def write_sequences(sequences, path_or_buffer, format="fasta"): """Write sequences to a given path in the given format. Automatically infer compression mode (e.g., gzip, etc.) based on the path's filename extension. Parameters ---------- sequences : iterable of Bio.SeqRecord.SeqRecord A list-like collection of sequences to write path_or_buffer : str or `os.PathLike` or `io.StringIO` A path to a file to write the given sequences in the given format. format : str Format of input sequences matching any of those supported by BioPython (e.g., "fasta", "genbank", etc.) Returns ------- int : Number of sequences written out to the given path. """ with open_file(path_or_buffer, "wt") as handle: # Bio.SeqIO supports writing to the same handle multiple times for specific # file formats. For the formats we use, this function call should work for # both a newly opened file handle or one that is provided by the caller. # For more details see: # https://github.com/biopython/biopython/blob/25f5152f4aeefe184a323db25694fbfe0593f0e2/Bio/SeqIO/__init__.py#L233-L251 sequences_written = Bio.SeqIO.write( sequences, handle, format ) return sequences_written def write_records_to_fasta(records, fasta, seq_id_field='strain', seq_field='sequence'): """ Write sequences from dict *records* to a *fasta* file. Yields the records with the *seq_field* dropped so that they can be consumed downstream. Parameters ---------- records: iterable of dict Iterator that yields dict that contains sequences fasta: str Path to FASTA file seq_id_field: str, optional Field name for the sequence identifier seq_field: str, optional Field name for the genomic sequence Yields ------ dict: A copy of the record with *seq_field* dropped Raises ------ AugurError When the sequence id field or sequence field does not exist in a record """ with open_file(fasta, "w") as output_fasta: for record in records: if seq_id_field not in record: raise AugurError(f"Provided sequence identifier field {seq_id_field!r} does not exist.") if seq_field not in record: raise AugurError(f"Provided sequence field {seq_field!r} does not exist.") output_fasta.writelines([ f">{record[seq_id_field]}\n", f"{record[seq_field]}\n" ]) yield { key: value for key, value in record.items() if key != seq_field } augur-24.2.2/augur/io/shell_command_runner.py000066400000000000000000000105341456376326500212520ustar00rootroot00000000000000import os import sys import subprocess from signal import Signals from textwrap import dedent, indent try: from signal import SIGKILL except ImportError: # A non-POSIX platform SIGKILL = None # type: ignore[assignment] def run_shell_command(cmd, raise_errors=False, extra_env=None): """ Run the given command string via Bash with error checking. Returns True if the command exits normally. Returns False if the command exits with failure and "raise_errors" is False (the default). When "raise_errors" is True, exceptions are rethrown. If an *extra_env* mapping is passed, the provided keys and values are overlayed onto the default subprocess environment. """ return ShellCommandRunner(cmd, raise_errors=raise_errors, extra_env=extra_env).run() class ShellCommandRunner: def __init__(self, cmd, *, raise_errors=False, extra_env=None): self.cmd = cmd self.raise_errors = raise_errors self.extra_env = extra_env def run(self): try: self.invoke_command() except Exception as error: self.print_error_message(error) if self.raise_errors: raise error return False return True def invoke_command(self): return subprocess.check_output( self.shell_executable + self.shell_args, shell=False, stderr=subprocess.STDOUT, env=self.modified_env, ) @property def shell_executable(self): if os.name == "posix": return ["/bin/bash"] else: # We try best effort on other systems. For now that means nt/java. return ["env", "bash"] @property def shell_args(self): return ["-c", "set -euo pipefail; " + self.cmd] @property def modified_env(self): env = os.environ.copy() if self.extra_env: env.update(self.extra_env) return env def print_error_message(self, error): if isinstance(error, subprocess.CalledProcessError): signal = self.signal_from_error(error) if signal: message = f"Shell exited from fatal signal {signal.name} when running: {self.cmd}" else: message = f"Shell exited {error.returncode} when running: {self.cmd}" output = (error.output or b'').decode().strip("\n") if output: message += f"\nCommand output was:\n{indent(output, ' ')}" # Bash exits 127 when it cannot find a given command. if error.returncode == 127: message += "\nAre you sure this program is installed?" # Linux's oom-killer issues SIGKILLs to alleviate memory pressure elif signal is SIGKILL: message += f"\nThe OS may have terminated the command due to an out-of-memory condition." elif isinstance(error, FileNotFoundError): shell = " and ".join(self.shell_executable) message = f""" Unable to run shell commands using {shell}! Augur requires {shell} to be installed. Please open an issue on GitHub if you need assistance. """ else: message = str(error) self.print_error(message) @staticmethod def print_error(message): """Prints message to STDERR formatted with textwrap.dedent""" print("\nERROR: " + dedent(message).lstrip("\n") + "\n", file=sys.stderr) @staticmethod def signal_from_error(error): """ Return the :py:class:`signal.Signals` member for the :py:attr:`subprocess.CalledProcessError.returncode` of *error*, if any. """ def signal(num): try: return Signals(num) except ValueError: return None # A grandchild process exited from a signal, which bubbled back up # through Bash as 128 + signal number. if error.returncode > 128: return signal(error.returncode - 128) # CalledProcessError documents that fatal signals for the direct child # process (bash in our case) are reported as negative exit codes. elif error.returncode < 0: return signal(abs(error.returncode)) else: return None augur-24.2.2/augur/io/strains.py000066400000000000000000000014401456376326500165330ustar00rootroot00000000000000from augur.utils import read_entries def read_strains(*files, comment_char="#"): """Reads strain names from one or more plain text files and returns the set of distinct strains. Strain names can be commented with full-line or inline comments. For example, the following is a valid strain names file:: # this is a comment at the top of the file strain1 # exclude strain1 because it isn't sequenced properly strain2 # this is an empty line that will be ignored. Parameters ---------- files : iterable of str one or more names of text files with one strain name per line Returns ------- set : strain names from the given input files """ return set(read_entries(*files, comment_char=comment_char)) augur-24.2.2/augur/io/vcf.py000066400000000000000000000107561456376326500156400ustar00rootroot00000000000000import os import shlex from .file import open_file from .shell_command_runner import run_shell_command shquote = shlex.quote def is_vcf(filename): """Convenience method to check if a file is a vcf file. Examples -------- >>> is_vcf(None) False >>> is_vcf("./foo") False >>> is_vcf("./foo.vcf") True >>> is_vcf("./foo.vcf.GZ") True """ return bool(filename) and any(filename.lower().endswith(x) for x in ('.vcf', '.vcf.gz')) def write_vcf(input_filename, output_filename, dropped_samps): if _filename_gz(input_filename): input_arg = "--gzvcf" else: input_arg = "--vcf" if _filename_gz(output_filename): output_pipe = "| gzip -c" else: output_pipe = "" drop_args = ["--remove-indv " + shquote(s) for s in dropped_samps] call = ["vcftools"] + drop_args + [input_arg, shquote(input_filename), "--recode --stdout", output_pipe, ">", shquote(output_filename)] print("Filtering samples using VCFTools with the call:") print(" ".join(call)) run_shell_command(" ".join(call), raise_errors = True) # remove vcftools log file try: os.remove('out.log') except OSError: pass def write_VCF_translation(prot_dict, vcf_file_name, ref_file_name): """ Writes out a VCF-style file (which seems to be minimally handleable by vcftools and pyvcf) of the AA differences between sequences and the reference. This is a similar format created/used by read_in_vcf except that there is one of these dicts (with sequences, reference, positions) for EACH gene. Also writes out a fasta of the reference alignment. EBH 12 Dec 2017 """ import numpy as np #for the header seqNames = list(prot_dict[list(prot_dict.keys())[0]]['sequences'].keys()) #prepare the header of the VCF & write out header=["#CHROM","POS","ID","REF","ALT","QUAL","FILTER","INFO","FORMAT"]+seqNames with open_file(vcf_file_name, 'w') as the_file: the_file.write( "##fileformat=VCFv4.2\n"+ "##source=NextStrain_Protein_Translation\n"+ "##FORMAT=\n") the_file.write("\t".join(header)+"\n") refWrite = [] vcfWrite = [] #go through for every gene/protein for fname, prot in prot_dict.items(): sequences = prot['sequences'] ref = prot['reference'] positions = prot['positions'] #write out the reference fasta refWrite.append(">"+fname) refWrite.append(ref) #go through every variable position #There are no deletions here, so it's simpler than for VCF nuc sequenes! for pi in positions: pos = pi+1 #change numbering to match VCF not python refb = ref[pi] #reference base at this position #try/except is (much) faster than list comprehension! pattern = [] for k,v in sequences.items(): try: pattern.append(sequences[k][pi]) except KeyError: pattern.append('.') pattern = np.array(pattern) #get the list of ALTs - minus any '.'! uniques = np.unique(pattern) uniques = uniques[np.where(uniques!='.')] #Convert bases to the number that matches the ALT j=1 for u in uniques: pattern[np.where(pattern==u)[0]] = str(j) j+=1 #Now convert these calls to #/# (VCF format) calls = [ j+"/"+j if j!='.' else '.' for j in pattern ] if len(uniques)==0: print("UNEXPECTED ERROR WHILE CONVERTING TO VCF AT POSITION {}".format(str(pi))) break #put it all together and write it out output = [fname, str(pos), ".", refb, ",".join(uniques), ".", "PASS", ".", "GT"] + calls vcfWrite.append("\t".join(output)) #write it all out with open_file(ref_file_name, 'w') as the_file: the_file.write("\n".join(refWrite)) with open_file(vcf_file_name, 'a') as the_file: the_file.write("\n".join(vcfWrite)) if vcf_file_name.lower().endswith('.gz'): import os #must temporarily remove .gz ending, or gzip won't zip it! os.rename(vcf_file_name, vcf_file_name[:-3]) call = ["gzip", vcf_file_name[:-3]] run_shell_command(" ".join(call), raise_errors = True) def _filename_gz(filename): return filename.lower().endswith(".gz") augur-24.2.2/augur/lbi.py000066400000000000000000000123121456376326500152070ustar00rootroot00000000000000"""Calculate LBI for a given tree and one or more sets of parameters. """ import Bio import Bio.Phylo from collections import defaultdict import json import numpy as np from .io.file import open_file from .utils import write_json def select_nodes_in_season(tree, timepoint, time_window=0.6): """Annotate a boolean to each node in the tree if it is alive at the given timepoint or prior to the timepoint by the given time window preceding. This annotation is used by the LBI and epitope cross-immunity predictors. """ for node in tree.find_clades(order="postorder"): if node.is_terminal(): if node.attr['num_date'] <= timepoint and node.attr['num_date'] > timepoint - time_window: node.alive=True else: node.alive=False else: node.alive = any(ch.alive for ch in node.clades) def calculate_LBI(tree, attr="lbi", tau=0.4, transform=lambda x:x, normalize=True): ''' traverses the tree in postorder and preorder to calculate the up and downstream tree length exponentially weighted by distance. then adds them as LBI tree -- biopython tree for whose node the LBI is being computed attr -- the attribute name used to store the result ''' # Calculate clock length. tree.root.clock_length = 0.0 for node in tree.find_clades(): for child in node.clades: child.clock_length = child.attr['num_date'] - node.attr['num_date'] # traverse the tree in postorder (children first) to calculate msg to parents for node in tree.find_clades(order="postorder"): node.down_polarizer = 0 node.up_polarizer = 0 for child in node.clades: node.up_polarizer += child.up_polarizer bl = node.clock_length / tau node.up_polarizer *= np.exp(-bl) if node.alive: node.up_polarizer += tau*(1-np.exp(-bl)) # traverse the tree in preorder (parents first) to calculate msg to children for node in tree.get_nonterminals(): for child1 in node.clades: child1.down_polarizer = node.down_polarizer for child2 in node.clades: if child1!=child2: child1.down_polarizer += child2.up_polarizer bl = child1.clock_length / tau child1.down_polarizer *= np.exp(-bl) if child1.alive: child1.down_polarizer += tau*(1-np.exp(-bl)) # go over all nodes and calculate the LBI (can be done in any order) max_LBI = 0.0 for node in tree.find_clades(order="postorder"): tmp_LBI = node.down_polarizer for child in node.clades: tmp_LBI += child.up_polarizer node.attr[attr] = transform(tmp_LBI) if node.attr[attr] > max_LBI: max_LBI = node.attr[attr] # Normalize LBI to range [0, 1]. for node in tree.find_clades(): if normalize: node.attr[attr] /= max_LBI setattr(node, attr, node.attr[attr]) def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("lbi", help=__doc__) parser.add_argument("--tree", help="Newick tree", required=True) parser.add_argument("--branch-lengths", help="JSON with branch lengths and internal node dates estimated by TreeTime", required=True) parser.add_argument("--output", help="JSON file with calculated distances stored by node name and attribute name", required=True) parser.add_argument("--attribute-names", nargs="+", help="names to store distances associated with the corresponding masks", required=True) parser.add_argument("--tau", nargs="+", type=float, help="tau value(s) defining the neighborhood of each clade", required=True) parser.add_argument("--window", nargs="+", type=float, help="time window(s) to calculate LBI across", required=True) parser.add_argument("--no-normalization", action="store_true", help="disable normalization of LBI by the maximum value") return parser def run(args): # Load tree. tree = Bio.Phylo.read(args.tree, "newick") # Load branch lengths. with open_file(args.branch_lengths, "r") as json_fh: branch_lengths = json.load(json_fh) # Annotate branch lengths and dates onto tree nodes. for node in tree.find_clades(): node.attr = branch_lengths["nodes"][node.name] node.attr["num_date"] = node.attr["numdate"] # Find maximum time point in the given tree. timepoint = max(node.attr["num_date"] for node in tree.find_clades()) # Calculate LBI for all requested sets of parameters and annotate LBI values # to the corresponding attribute names. lbi_by_node = defaultdict(dict) for i in range(len(args.tau)): tau = args.tau[i] window = args.window[i] attribute_name = args.attribute_names[i] # Select nodes that are alive in the given time window. select_nodes_in_season(tree, timepoint, window) # Calculate LBI. calculate_LBI(tree, attribute_name, tau, normalize=(not args.no_normalization)) # Collect LBI values into a per-node JSON for export. for node in tree.find_clades(): lbi_by_node[node.name][attribute_name] = node.attr[attribute_name] # Export LBI to JSON. write_json({"nodes": lbi_by_node}, args.output) augur-24.2.2/augur/mask.py000066400000000000000000000230061456376326500153760ustar00rootroot00000000000000""" Mask specified sites from a VCF or FASTA file. """ import os import sys from shutil import copyfile from Bio.Seq import MutableSeq from .io.file import open_file from .io.sequences import read_sequences, write_sequences from .io.shell_command_runner import run_shell_command from .io.vcf import shquote, is_vcf from .utils import load_mask_sites, VALID_NUCLEOTIDES def get_chrom_name(vcf_file): """Read the CHROM field from the first non-header line of a vcf file. Returns: str or None: Either the CHROM field or None if no non-comment line could be found. """ with open_file(vcf_file, mode='r') as f: for line in f: if line[0] != "#": header = line.strip().partition('\t') return header[0] def mask_vcf(mask_sites, in_file, out_file, cleanup=True): """Mask the provided site list from a VCF file and write to a new file. This function relies on 'vcftools --exclude-positions' to mask the requested sites. Parameters ---------- mask_sites: list of int A list of site indexes to exclude from the vcf. in_file: str The path to the vcf file you wish to mask. out_file: str The path to write the resulting vcf to cleanup: bool Clean up the intermediate files, including the VCFTools log and mask sites file """ cleanup_files = ['out.log'] # Create the temporary masking file to be passed to VCFTools # Need CHROM name from VCF file: chrom_name = get_chrom_name(in_file) if chrom_name is None: print("ERROR: Something went wrong reading your VCF file: a CHROM column could not be found. " "Please check the file is valid VCF format.") sys.exit(1) # mask_sites is zero-indexed, VCFTools expects 1-indexed. exclude = [chrom_name + "\t" + str(pos + 1) for pos in mask_sites] temp_mask_file = in_file + "_maskTemp" with open_file(temp_mask_file, 'w') as fh: fh.write("\n".join(exclude)) cleanup_files.append(temp_mask_file) #Read in/write out according to file ending in_call = "--gzvcf" if in_file.lower().endswith(".gz") else "--vcf" out_call = "| gzip -c" if out_file.lower().endswith(".gz") else "" call = ["vcftools", "--exclude-positions", shquote(temp_mask_file), in_call, shquote(in_file), "--recode --stdout", out_call, ">", shquote(out_file)] print("Removing masked sites from VCF file using vcftools... this may take some time. Call:") print(" ".join(call)) run_shell_command(" ".join(call), raise_errors = True) # remove vcftools log file if cleanup: for file in cleanup_files: try: os.remove(file) except OSError: pass def mask_sequence(sequence, mask_sites, mask_from_beginning, mask_from_end, mask_invalid): """Mask characters at the given sites in a single sequence record, modifying the record in place. Parameters ---------- sequence : Bio.SeqRecord.SeqRecord A sequence to be masked mask_sites: list of int A list of site indexes to exclude from the FASTA. mask_from_beginning: int Number of sites to mask from the beginning of each sequence (default 0) mask_from_end: int Number of sites to mask from the end of each sequence (default 0) mask_invalid: bool Mask invalid nucleotides (default False) Returns ------- Bio.SeqRecord.SeqRecord Masked sequence in its original record object """ # Convert to a mutable sequence to enable masking with Ns. sequence_length = len(sequence.seq) beginning, end = mask_from_beginning, mask_from_end if beginning + end > sequence_length: beginning, end = sequence_length, 0 seq = str(sequence.seq)[beginning:-end or None] if mask_invalid: seq = "".join(nuc if nuc in VALID_NUCLEOTIDES else "N" for nuc in seq) masked_sequence = MutableSeq("N" * beginning + seq + "N" * end) # Replace all excluded sites with Ns. for site in mask_sites: if site < sequence_length: masked_sequence[site] = "N" sequence.seq = masked_sequence return sequence def mask_fasta(mask_sites, in_file, out_file, mask_from_beginning=0, mask_from_end=0, mask_invalid=False): """Mask the provided site list from a FASTA file and write to a new file. Masked sites are overwritten as "N"s. Parameters ---------- mask_sites: list of int A list of site indexes to exclude from the FASTA. in_file: str The path to the FASTA file you wish to mask. out_file: str The path to write the resulting FASTA to mask_from_beginning: int Number of sites to mask from the beginning of each sequence (default 0) mask_from_end: int Number of sites to mask from the end of each sequence (default 0) mask_invalid: bool Mask invalid nucleotides (default False) """ # Load alignment as FASTA generator to prevent loading the whole alignment # into memory. alignment = read_sequences(in_file) # Write the masked alignment to disk one record at a time. print("Removing masked sites from FASTA file.") masked_sequences = ( mask_sequence( sequence, mask_sites, mask_from_beginning, mask_from_end, mask_invalid, ) for sequence in alignment ) sequences_written = write_sequences( masked_sequences, out_file, "fasta" ) def register_arguments(parser): """ Add arguments to parser. Kept as a separate function than `register_parser` to continue to support unit tests that use this function to create argparser. """ parser.add_argument('--sequences', '-s', required=True, help="sequences in VCF or FASTA format") parser.add_argument('--mask', dest="mask_file", required=False, help="locations to be masked in either BED file format, DRM format, or one 1-indexed site per line.") parser.add_argument('--mask-from-beginning', type=int, default=0, help="FASTA Only: Number of sites to mask from beginning") parser.add_argument('--mask-from-end', type=int, default=0, help="FASTA Only: Number of sites to mask from end") parser.add_argument('--mask-invalid', action='store_true', help="FASTA Only: Mask invalid nucleotides") parser.add_argument("--mask-sites", nargs='+', type = int, help="1-indexed list of sites to mask") parser.add_argument('--output', '-o', help="output file") parser.add_argument('--no-cleanup', dest="cleanup", action="store_false", help="Leave intermediate files around. May be useful for debugging") def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("mask", help=__doc__) register_arguments(parser) return parser def run(args): ''' Mask specified sites from the VCF or FASTA. For VCF files, his occurs by removing them entirely from the VCF, essentially making them identical to the reference at the locations. For FASTA files, masked sites are replaced with "N". If users don't specify output, will overwrite the input file. ''' # Check files exist and are not empty if not os.path.isfile(args.sequences): print("ERROR: File {} does not exist!".format(args.sequences)) sys.exit(1) if os.path.getsize(args.sequences) == 0: print("ERROR: {} is empty. Please check how this file was produced. " "Did an error occur in an earlier step?".format(args.sequences)) sys.exit(1) if args.mask_file: if not os.path.isfile(args.mask_file): print("ERROR: File {} does not exist!".format(args.mask_file)) sys.exit(1) if os.path.getsize(args.mask_file) == 0: print("ERROR: {} is an empty file.".format(args.mask_file)) sys.exit(1) if not any((args.mask_file, args.mask_from_beginning, args.mask_from_end, args.mask_sites, args.mask_invalid)): print("No masking sites provided. Must include one of --mask, --mask-from-beginning, --mask-from-end, --mask-invalid, or --mask-sites") sys.exit(1) mask_sites = set() if args.mask_sites: # Mask sites passed in as 1-indexed mask_sites.update(site - 1 for site in args.mask_sites) if args.mask_file: mask_sites.update(load_mask_sites(args.mask_file)) mask_sites = sorted(mask_sites) # For both FASTA and VCF masking, we need a proper separate output file if args.output is not None: out_file = args.output else: out_file = os.path.join(os.path.dirname(args.sequences), "masked_" + os.path.basename(args.sequences)) if is_vcf(args.sequences): if args.mask_from_beginning or args.mask_from_end or args.mask_invalid: print("Cannot use --mask-from-beginning, --mask-from-end, or --mask-invalid with VCF files!") sys.exit(1) mask_vcf(mask_sites, args.sequences, out_file, args.cleanup) else: mask_fasta(mask_sites, args.sequences, out_file, mask_from_beginning=args.mask_from_beginning, mask_from_end=args.mask_from_end, mask_invalid=args.mask_invalid) if args.output is None: copyfile(out_file, args.sequences) if args.cleanup: os.remove(out_file) augur-24.2.2/augur/measurements/000077500000000000000000000000001456376326500166005ustar00rootroot00000000000000augur-24.2.2/augur/measurements/__init__.py000066400000000000000000000010401456376326500207040ustar00rootroot00000000000000""" Create JSON files suitable for visualization within the measurements panel of Auspice. """ from augur.argparse_ import add_command_subparsers from augur.utils import first_line from . import export, concat SUBCOMMANDS = [ export, concat, ] def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("measurements", help=first_line(__doc__)) # Add subparsers for subcommands subparsers = parser.add_subparsers(dest='subcommand') add_command_subparsers(subparsers, SUBCOMMANDS) return parser augur-24.2.2/augur/measurements/concat.py000066400000000000000000000034661456376326500204320ustar00rootroot00000000000000""" Concatenate multiple measurements JSONs into a single JSON file """ import sys from augur.utils import first_line, write_json from augur.validate import ( measurements as read_measurements_json, ValidateError ) def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("concat", help=first_line(__doc__)) required = parser.add_argument_group( title="REQUIRED" ) required.add_argument("--jsons", required=True, type=str, nargs="+", metavar="JSONs", help="Measurement JSON files to concatenate.") required.add_argument("--output-json", required=True, metavar="JSON", type=str, help="Output JSON file") optional = parser.add_argument_group( title="OPTIONAL SETTINGS" ) optional.add_argument("--default-collection", type=str, help="The key of the default collection to display. " + "If not provided, the first collection of the first JSON file will be displayed") optional.add_argument("--minify-json", action="store_true", help="Concatenate JSONs without indentation or line returns.") return parser def run(args): output = { 'collections': [] } if args.default_collection is not None: output['default_collection'] = args.default_collection for json in args.jsons: measurements = read_measurements_json(json) output['collections'].extend(measurements['collections']) indent = {"indent": None} if args.minify_json else {} write_json(output, args.output_json, include_version=False, **indent) try: read_measurements_json(measurements_json=args.output_json) except ValidateError: print( "ERROR: Validation of output JSON failed. See detailed errors above.", file=sys.stderr, ) sys.exit(1) augur-24.2.2/augur/measurements/export.py000066400000000000000000000273301456376326500205000ustar00rootroot00000000000000""" Export a measurements JSON for a single collection """ import os import pandas as pd import sys from augur.argparse_ import HideAsFalseAction from augur.io.file import PANDAS_READ_CSV_OPTIONS from augur.utils import first_line, write_json from augur.validate import ( measurements as read_measurements_json, measurements_collection_config as read_collection_config_json, ValidateError ) # Default values for optional arguments that can also be provided via config file # Setting as global dict instead of using argparse default so that the # config file does not always get overwritten by the default values DEFAULT_ARGS = { 'title': 'Measurements', 'x_axis_label': 'measurement values', } def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("export", help=first_line(__doc__)) required = parser.add_argument_group( title="REQUIRED" ) required.add_argument("--collection", required=True, metavar="TSV", help="Collection of measurements and metadata in a TSV file. " + "Keep in mind duplicate columns will be renamed as 'X', 'X.1', 'X.2'...'X.N'") required.add_argument("--strain-column", default="strain", help="Name of the column containing strain names. " + "Provided column will be renamed to `strain` so please make sure no other columns are named `strain`. " + "Strain names in this column should match the strain names in the corresponding Auspice dataset JSON. " + "(default: %(default)s)") required.add_argument("--value-column", default="value", help="Name of the column containing the numeric values to be plotted for the given collection. " + "Provided column will be renamed to `value` so please make sure no other columns are named `value`. " + "(default: %(default)s)") required.add_argument("--output-json", required=True, metavar="JSON", type=str, help="Output JSON file. " + "The file name must follow the Auspice sidecar file naming convention to be recognized as a sidecar file. " + "See Nextstrain data format docs for more details.") config = parser.add_argument_group( title="COLLECTION CONFIGURATION", description="These options control the configuration of the collection for Auspice. " + "You can provide a config JSON (which includes all available options) or " + "command line arguments (which are more limited). " + "Command line arguments will override the values set in the config JSON." ) config.add_argument("--collection-config", metavar="JSON", help="Collection configuration file for advanced configurations. ") config.add_argument("--grouping-column", nargs="+", help="Name of the column(s) that should be used as grouping(s) for measurements. " + "Note that if groupings are provided via command line args, the default group-by " + "field in the config JSON will be dropped.") config.add_argument("--key", help="A short key name of the collection for internal use within Auspice. " + "If not provided via config or command line option, the collection TSV filename will be used. ") config.add_argument("--title", help="The full title of the collection to display in the measurements panel title. " + f"If not provided via config or command line option, the panel's default title is {DEFAULT_ARGS['title']!r}.") config.add_argument("--x-axis-label", help="The short label to display for the x-axis that describles the value of the measurements. " + "If not provided via config or command line option, the panel's default " + f"x-axis label is {DEFAULT_ARGS['x_axis_label']!r}.") config.add_argument("--thresholds", type=float, nargs="+", help="Measurements value threshold(s) to be displayed in the measurements panel.") config.add_argument("--filters", nargs="+", help="The columns that are to be used a filters for measurements. " + "If not provided, all columns will be available as filters.") config.add_argument("--group-by", type=str, help="The default grouping column. If not provided, the first grouping will be used.") config.add_argument("--measurements-display", type=str, choices=["raw", "mean"], help="The default display of the measurements") config.add_argument("--show-overall-mean", "--hide-overall-mean", dest="show_overall_mean", action=HideAsFalseAction, nargs=0, help="Show or hide the overall mean per group by default") config.add_argument("--show-threshold", "--hide-threshold", dest="show_threshold", action=HideAsFalseAction, nargs=0, help="Show or hide the threshold(s) by default. This will be ignored if no threshold(s) are provided.") optional = parser.add_argument_group( title="OPTIONAL SETTINGS" ) optional.add_argument("--include-columns", nargs="+", help="The columns to include from the collection TSV in the measurements JSON. " + "Be sure to list columns that are used as groupings and/or filters. " + "If no columns are provided, then all columns will be included by default.") optional.add_argument("--minify-json", action="store_true", help="Export JSON without indentation or line returns.") return parser def run(args): # Default value to None so all columns will be read columns_to_include = None if args.include_columns is not None: columns_to_include = set([args.strain_column, args.value_column] + args.include_columns) # Load input collection TSV file try: collection_df = pd.read_csv(args.collection, sep="\t", usecols=columns_to_include, **PANDAS_READ_CSV_OPTIONS) except FileNotFoundError: print( f"ERROR: collection TSV file {args.collection!r} does not exist", file=sys.stderr, ) sys.exit(1) # Verify the strain and value columns are different if args.strain_column == args.value_column: print( "ERROR: The strain column and value column cannot be the same column.", file=sys.stderr ) sys.exit(1) # Define mapping of required columns to user provided columns required_column_map = { args.strain_column: 'strain', args.value_column: 'value', } # Check all required columns are included in collection TSV checks_passed = True for provided_column, required_column in required_column_map.items(): # Confirm the provided column exists if provided_column not in collection_df.columns: print( f"ERROR: Provided {required_column} column {provided_column!r} does not exist in collection TSV.", file=sys.stderr, ) checks_passed = False # Confirm the provided column does not overwrite an existing column if (required_column in collection_df.columns and provided_column != required_column): print( f"ERROR: Cannot use provided {provided_column!r} column as the {required_column} column", f"because a {required_column!r} column already exists in collection TSV.", file=sys.stderr, ) checks_passed = False if not checks_passed: sys.exit(1) # Rename user provided columns to expected columns collection_df = collection_df.rename(columns=required_column_map) # Make sure the value column is numeric try: collection_df['value'] = pd.to_numeric(collection_df['value']) except ValueError as e: print(f"ERROR: Found a non-numeric measurement value: {e!r}", file=sys.stderr) sys.exit(1) collection_config = {} if args.collection_config is not None: try: collection_config = read_collection_config_json(args.collection_config) except ValidateError: print( f"Validation of provided collection config JSON {args.collection_config!r} failed.", "Please check the formatting of this file.", file=sys.stderr ) sys.exit(1) groupings = collection_config.pop('groupings', None) if args.grouping_column is not None: groupings = [] for column in args.grouping_column: # If the user specified columns to include, verify the grouping column was included if args.include_columns and column not in args.include_columns: print( f"ERROR: Provided grouping column {column!r} was not in the", f"list of columns to include: {args.include_columns}.", file=sys.stderr, ) sys.exit(1) # Verify the grouping column is included in the collection if column not in collection_df.columns: print( f"ERROR: Provided grouping column {column!r} does not exist in collection TSV.", file=sys.stderr, ) sys.exit(1) groupings.append({'key': column}) if collection_config.get('display_defaults', {}).pop('group_by', None): print( "WARNING: The default group-by in the collection config has been removed", "because new groupings have been provided via the --grouping-column option.", file=sys.stderr ) if not groupings: print("ERROR: Cannot create measurements JSON without valid groupings", file=sys.stderr) sys.exit(1) # Convert deprecated single threshold value to list if "thresholds" not provided single_threshold = collection_config.pop("threshold", None) if single_threshold is not None and "thresholds" not in collection_config: collection_config["thresholds"] = [single_threshold] # Combine collection config with command line args config_key_args = ['key', 'title', 'filters', 'x_axis_label', 'thresholds'] display_default_args = ['group_by', 'measurements_display', 'show_overall_mean', 'show_threshold'] for key_arg in config_key_args: key_arg_value = getattr(args, key_arg) if key_arg_value is not None: collection_config[key_arg] = key_arg_value for default_arg in display_default_args: default_arg_value = getattr(args, default_arg) if default_arg_value is not None: collection_config['display_defaults'] = collection_config.get('display_defaults', {}) collection_config['display_defaults'][default_arg] = default_arg_value # Create collection output object with default values for required keys collection_output = { 'key': collection_config.pop('key', os.path.basename(args.collection)), 'title': collection_config.pop('title', DEFAULT_ARGS['title']), 'groupings': groupings, 'x_axis_label': collection_config.pop('x_axis_label', DEFAULT_ARGS['x_axis_label']), 'measurements': collection_df.to_dict(orient='records'), **collection_config } # Create final output with single collection output = { 'collections': [collection_output] } # Set indentation to None to create compact JSON if specified indent = {"indent": None} if args.minify_json else {} # Create output JSON write_json(output, args.output_json, include_version=False, **indent) # Verify the produced output is a valid measurements JSON try: read_measurements_json(measurements_json=args.output_json) except ValidateError: print( "ERROR: Validation of output JSON failed. See detailed errors above.", file=sys.stderr, ) sys.exit(1) augur-24.2.2/augur/parse.py000066400000000000000000000171301456376326500155560ustar00rootroot00000000000000""" Parse delimited fields from FASTA sequence names into a TSV and FASTA file. """ import pandas as pd import sys from .io.file import open_file from .io.sequences import read_sequences, write_sequences from .dates import get_numerical_date_from_value from .errors import AugurError PARSE_DEFAULT_ID_COLUMNS = ("name", "strain") forbidden_characters = str.maketrans( {' ': None, '(': '_', ')': '_', '[': '_', ']': '_', ':': '_', ',': '_', ';': '_', '\\': '_'} ) def fix_dates(d, dayfirst=True): ''' attempt to parse a date string using pandas date parser. If ambiguous, the argument 'dayfirst' determines whether month or day is assumed to be the first field. Incomplete dates will be padded with XX. On failure to parse the date, the function will return the input. ''' try: from pandas.core.tools.datetimes import parsing results = parsing.parse_time_string(d, dayfirst=dayfirst) if len(results) == 2: dto, res = results else: dto, _, res = results if res == 'year': return "%d-XX-XX"%dto.year elif res == 'month': return "%d-%02d-XX"%(dto.year, dto.month) else: return "%d-%02d-%02d"%(dto.year, dto.month, dto.day) except ValueError as e: # If the date can't be parsed by pandas above or as our own ambiguous # date format (e.g., "2020-XX-XX"), let the user know. try: parsed_date = get_numerical_date_from_value(d, "%Y-%m-%d") except ValueError: parsed_date = None if parsed_date is None: print("WARNING: unable to parse %s as date"%d, e, file=sys.stderr) return d def prettify(x, trim=0, camelCase=False, etal=None, removeComma=False): res = x if 0 < trim < len(x): res = x[:trim] + "..." if res in {'usvi', 'usa', 'uk'}: res = res.upper() words = res.split('_') if camelCase: words = map(str.capitalize, words) res = ' '.join(words) if removeComma: res = res.replace(',', '') if etal == 'lower': res = res.replace('Et Al', 'et al').replace('Et Al.', 'et al.').replace('Et al', 'et al') elif etal == 'strip': res = res.replace('et al.', '').replace('Et Al.', '').replace('et al', '').replace('Et Al', '') return res def parse_sequence(sequence, fields, strain_key="strain", separator="|", prettify_fields=None, fix_dates_format=None): """Parse a single sequence record into a sequence record and associated metadata. Parameters ---------- sequence : Bio.SeqRecord.SeqRecord a BioPython sequence record to parse with metadata stored in its description field. fields : list or tuple a list of names for fields expected in the given record's description. strain_key : str name of the field to use as the given sequence's unique id separator : str delimiter to split record description by. prettify_fields : list or tuple a list of field names for which the values in those fields should be prettified. fix_dates_format : str parse "date" field into the requested canonical format ("dayfirst" or "monthfirst"). Returns ------- Bio.SeqRecord.SeqRecord : a BioPython sequence record with the given sequence's name as the record id and all other metadata stripped. dict : metadata associated with the given record indexed by the given field names. """ sequence_fields = map(str.strip, sequence.description.split(separator)) metadata = dict(zip(fields, sequence_fields)) tmp_name = metadata[strain_key].translate(forbidden_characters) sequence.name = sequence.id = tmp_name sequence.description = '' if prettify_fields: for field in metadata.keys() & prettify_fields: if isinstance(metadata[field], str): metadata[field] = prettify(metadata[field], camelCase=(not field.startswith('author')), etal='lower' if field.startswith('author') else None) # parse dates and convert to a canonical format if fix_dates_format and 'date' in metadata: metadata['date'] = fix_dates( metadata['date'], dayfirst=fix_dates_format=='dayfirst' ) return sequence, metadata def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("parse", help=__doc__) parser.add_argument('--sequences', '-s', required=True, help="sequences in fasta or VCF format") parser.add_argument('--output-sequences', required=True, help="output sequences file") parser.add_argument('--output-metadata', required=True, help="output metadata file") parser.add_argument('--output-id-field', required=False, help=f"The record field to use as the sequence identifier in the FASTA output. If not provided, this will use the first available of {PARSE_DEFAULT_ID_COLUMNS}. If none of those are available, this will use the first field in the fasta header.") parser.add_argument('--fields', required=True, nargs='+', help="fields in fasta header") parser.add_argument('--prettify-fields', nargs='+', help="apply string prettifying operations (underscores to spaces, capitalization, etc) to specified metadata fields") parser.add_argument('--separator', default='|', help="separator of fasta header") parser.add_argument('--fix-dates', choices=['dayfirst', 'monthfirst'], help="attempt to parse non-standard dates and output them in standard YYYY-MM-DD format") return parser def run(args): ''' parse a fasta file and turn information in the header into a tsv or csv file. ''' sequences = read_sequences(args.sequences) # if strain or name are found in specified fields, use this # field to index the dictionary and the data frame meta_data = {} strain_key = None if args.output_id_field: if args.output_id_field not in args.fields: raise AugurError(f"Output id field '{args.output_id_field}' not found in fields {args.fields}.") strain_key = args.output_id_field else: for possible_id in PARSE_DEFAULT_ID_COLUMNS: if possible_id in args.fields: strain_key = possible_id if possible_id == "name" and "strain" in args.fields: print("DEPRECATED: The default search order for the ID field will be changing from ('name', 'strain') to ('strain', 'name').\nUsers who prefer to keep using 'name' instead of 'strain' should use the parameter: --output-id-field 'name'", file=sys.stderr) break if not strain_key: strain_key = args.fields[0] # loop over sequences, parse fasta header of each sequence with open_file(args.output_sequences, "wt") as handle: for sequence in sequences: sequence_record, sequence_metadata = parse_sequence( sequence, args.fields, strain_key, args.separator, args.prettify_fields, args.fix_dates ) if sequence_record.id in meta_data: raise AugurError(f"Duplicate found for '{sequence_record.id}'.") meta_data[sequence_record.id] = sequence_metadata sequences_written = write_sequences( sequence_record, handle ) df = pd.DataFrame(meta_data.values()) df.to_csv( args.output_metadata, index=False, sep='\t' if args.output_metadata.endswith('tsv') else ',' ) augur-24.2.2/augur/reconstruct_sequences.py000066400000000000000000000077541456376326500211050ustar00rootroot00000000000000""" Reconstruct alignments from mutations inferred on the tree """ from Bio import SeqIO, Seq, SeqRecord, Phylo from .io.file import open_file from .utils import read_node_data def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("reconstruct-sequences", help=__doc__) parser.add_argument('--tree', required=True, help="tree as Newick file") parser.add_argument('--gene', type=str, help="gene to translate (list or file containing list)") parser.add_argument('--mutations', required=True, type=str, help="json file containing mutations " "mapped to each branch and the sequence of the root.") parser.add_argument('--vcf-aa-reference', type=str, help='fasta file of the reference gene translations for VCF format') parser.add_argument('--internal-nodes', action='store_true', help="include sequences of internal nodes in output") parser.add_argument('--output', type=str) return parser def get_sequence(pseq, muts): """reconstruct a child sequence from that of its parent and the mutations Parameters ---------- pseq : str sequence of the parent as string, won't be changed! muts : list mutations of the type K135T where K is the parental state, 135 is the position in 1-based numbering, and T is the new state Returns ------- str reconstructed sequence """ pseq_list = list(pseq) for mut in muts: new_state = mut[-1] pos = int(mut[1:-1])-1 assert pseq_list[pos]==mut[0] pseq_list[pos]=new_state return "".join(pseq_list) def load_alignments(sequence_files, gene_names): from Bio import AlignIO alignments = {} for fname, gene in zip(sequence_files, gene_names): alignments[gene] = AlignIO.read(fname, 'fasta') return alignments def run(args): ## read tree and data, if reading data fails, return with error code tree = Phylo.read(args.tree, 'newick') #check whether VCF - by existance of VCF reference file is_vcf = args.vcf_aa_reference is not None ## check file format and read in sequences node_data = read_node_data(args.mutations, args.tree) if node_data is None: print("ERROR: could not read mutation data "+ ("(incl sequences)" if not is_vcf else "")) return 1 root_node = tree.root.name #if VCF, read in the reference seq for each gene, put on root if(is_vcf): node_data["nodes"][root_node]['aa_sequences'] = {} with open_file(args.vcf_aa_reference) as handle: for record in SeqIO.parse(handle, "fasta"): if record.id==args.gene: #'root' may not be same as 'reference', so apply any mutations at root here! node_data["nodes"][root_node]['aa_sequences'][record.id] = get_sequence(str(record.seq), node_data["nodes"][root_node]["aa_muts"][record.id]) # check that root node has sequences for each requested gene if "aa_sequences" not in node_data["nodes"][root_node]: print("ERROR: ancestral sequences are not provided") return 1 if not args.gene in node_data["nodes"][root_node]['aa_sequences']: print("ERROR: ancestral sequences missing for gene",args.gene) return 1 # gather all reconstructed sequences sequences = dict() is_terminal = {} sequences[root_node] = node_data["nodes"][root_node]['aa_sequences'][args.gene] is_terminal[root_node] = False for node in tree.get_nonterminals(order='preorder'): parent_sequence = sequences[node.name] for child in node: sequences[child.name] = get_sequence(parent_sequence, node_data["nodes"][child.name]["aa_muts"][args.gene]) is_terminal[child.name] = child.is_terminal() # write alignments to file seqs = [SeqRecord.SeqRecord(seq=Seq.Seq(sequences[strain]), id=strain, name=strain, description='') for strain in sequences if is_terminal[strain] or args.internal_nodes] SeqIO.write(seqs, args.output, 'fasta') augur-24.2.2/augur/refine.py000066400000000000000000000455601456376326500157240ustar00rootroot00000000000000""" Refine an initial tree using sequence metadata. """ import numpy as np import sys from Bio import Phylo from .dates import get_numerical_dates from .dates.errors import InvalidYearBounds from .io.metadata import DEFAULT_DELIMITERS, DEFAULT_ID_COLUMNS, METADATA_DATE_COLUMN, InvalidDelimiter, Metadata, read_metadata from .utils import read_tree, write_json, InvalidTreeError from .errors import AugurError from treetime.vcf_utils import read_vcf from treetime.seq_utils import profile_maps def refine(tree=None, aln=None, ref=None, dates=None, branch_length_inference='auto', confidence=False, resolve_polytomies=True, stochastic_resolve=False, max_iter=2, precision='auto', infer_gtr=True, Tc=0.01, reroot=None, use_marginal='always', fixed_pi=None, use_fft=True, clock_rate=None, clock_std=None, clock_filter_iqd=None, verbosity=1, covariance=True, rng_seed=None, **kwarks): from treetime import TreeTime try: #Tc could be a number or 'opt' or 'skyline'. TreeTime expects a float or int if a number. Tc = float(Tc) except ValueError: True #let it remain a string if (ref is not None) and (fixed_pi is None): #if VCF, fix pi #Otherwise mutation TO gaps is overestimated b/c of seq length fixed_pi = [ref.count(base)/len(ref) for base in ['A','C','G','T','-']] if fixed_pi[-1] == 0: fixed_pi[-1] = 0.05 fixed_pi = [v-0.01 for v in fixed_pi] if ref is not None: # VCF -> adjust branch length #set branch length mode explicitly if auto, as informative-site only #trees can have big branch lengths, making this set incorrectly in TreeTime if branch_length_inference == 'auto': branch_length_inference = 'joint' #send ref, if is None, does no harm tt = TreeTime(tree=tree, aln=aln, ref=ref, dates=dates, use_fft=use_fft, verbose=verbosity, gtr='JC69', precision=precision, rng_seed=rng_seed) # conditionally run clock-filter and remove bad tips if clock_filter_iqd: # treetime clock filter will mark, but not remove bad tips tt.clock_filter(reroot=reroot, n_iqd=clock_filter_iqd, plot=False) #use whatever was specified # remove them explicitly leaves = [x for x in tt.tree.get_terminals()] for n in leaves: if n.bad_branch: tt.tree.prune(n) print('pruning leaf ', n.name) # fix treetime set-up for new tree topology tt.prepare_tree() if confidence and use_marginal: # estimate confidence intervals via marginal ML and assign # marginal ML times to nodes marginal = 'always' if use_fft else 'assign' else: marginal = 'only-final' if confidence else False # uncertainty of the the clock rate is relevant if confidence intervals are estimated if confidence and clock_std: vary_rate = clock_std # if standard devivation of clock is specified, use that elif (clock_rate is None) and confidence and covariance: vary_rate = True # if run in covariance mode, standard deviation can be estimated else: vary_rate = False # otherwise, rate uncertainty will be ignored tt.run(infer_gtr=infer_gtr, root=reroot, Tc=Tc, time_marginal=marginal, branch_length_mode=branch_length_inference, resolve_polytomies=resolve_polytomies, stochastic_resolve=stochastic_resolve, max_iter=max_iter, fixed_pi=fixed_pi, fixed_clock_rate=clock_rate, vary_rate=vary_rate, use_covariation=covariance, raise_uncaught_exceptions=True, **kwarks) if confidence: for n in tt.tree.find_clades(): n.num_date_confidence = list(tt.get_max_posterior_region(n, 0.9)) print("\nInferred a time resolved phylogeny using TreeTime:" "\n\tSagulenko et al. TreeTime: Maximum-likelihood phylodynamic analysis" "\n\tVirus Evolution, vol 4, https://academic.oup.com/ve/article/4/1/vex042/4794731\n") return tt def collect_node_data(T, attributes): data = {} for n in T.find_clades(): data[n.name] = { attr: getattr(n, attr) for attr in attributes if getattr(n, attr, None) is not None } return data def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("refine", help=__doc__) parser.add_argument('--alignment', '-a', help="alignment in fasta or VCF format") parser.add_argument('--tree', '-t', required=True, help="prebuilt Newick") parser.add_argument('--metadata', type=str, metavar="FILE", help="sequence metadata") parser.add_argument('--metadata-delimiters', default=DEFAULT_DELIMITERS, nargs="+", help="delimiters to accept when reading a metadata file. Only one delimiter will be inferred.") parser.add_argument('--metadata-id-columns', default=DEFAULT_ID_COLUMNS, nargs="+", help="names of possible metadata columns containing identifier information, ordered by priority. Only one ID column will be inferred.") parser.add_argument('--output-tree', type=str, help='file name to write tree to') parser.add_argument('--output-node-data', type=str, help='file name to write branch lengths as node data') parser.add_argument('--use-fft', action="store_true", help="produce timetree using FFT for convolutions") parser.add_argument('--max-iter', default=2, type=int, help="maximal number of iterations TreeTime uses for timetree inference") parser.add_argument('--timetree', action="store_true", help="produce timetree using treetime, requires tree where branch length is in units of average number of nucleotide or protein substitutions per site (and branch lengths do not exceed 4)") parser.add_argument('--coalescent', help="coalescent time scale in units of inverse clock rate (float), optimize as scalar ('opt'), or skyline ('skyline')") parser.add_argument('--gen-per-year', default=50, type=float, help="number of generations per year, relevant for skyline output('skyline')") parser.add_argument('--clock-rate', type=float, help="fixed clock rate") parser.add_argument('--clock-std-dev', type=float, help="standard deviation of the fixed clock_rate estimate") parser.add_argument('--root', nargs="+", default='best', help="rooting mechanism ('best', least-squares', 'min_dev', 'oldest', 'mid_point') " "OR node to root by OR two nodes indicating a monophyletic group to root by. " "Run treetime -h for definitions of rooting methods.") parser.add_argument('--keep-root', action="store_true", help="do not reroot the tree; use it as-is. " "Overrides anything specified by --root.") parser.add_argument('--covariance', dest='covariance', action='store_true', help="Account for covariation when estimating " "rates and/or rerooting. " "Use --no-covariance to turn off.") parser.add_argument('--no-covariance', dest='covariance', action='store_false') #If you set help here, it displays 'default: True' - which is confusing! resolve_group = parser.add_mutually_exclusive_group() resolve_group.add_argument('--keep-polytomies', action='store_true', help='Do not attempt to resolve polytomies') resolve_group.add_argument('--stochastic-resolve', action='store_true', help='Resolve polytomies via stochastic subtree building rather than greedy optimization') resolve_group.add_argument('--greedy-resolve', action='store_false', dest='stochastic_resolve') # inverse of `--stochastic-resolve` to facilitate changing defaults in the future parser.add_argument('--precision', type=int, choices=[0,1,2,3], help="precision used by TreeTime to determine the number of grid points that are used for the evaluation of the branch length interpolation objects. Values range from 0 (rough) to 3 (ultra fine) and default to 'auto'.") parser.add_argument('--date-format', default="%Y-%m-%d", help="date format") parser.add_argument('--date-confidence', action="store_true", help="calculate confidence intervals for node dates") parser.add_argument('--date-inference', default='joint', choices=["joint", "marginal"], help="assign internal nodes to their marginally most likely dates, not jointly most likely") parser.add_argument('--branch-length-inference', default='auto', choices = ['auto', 'joint', 'marginal', 'input'], help='branch length mode of treetime to use') parser.add_argument('--clock-filter-iqd', type=float, help='clock-filter: remove tips that deviate more than n_iqd ' 'interquartile ranges from the root-to-tip vs time regression') parser.add_argument('--vcf-reference', type=str, help='fasta file of the sequence the VCF was mapped to') parser.add_argument('--year-bounds', type=int, nargs='+', help='specify min or max & min prediction bounds for samples with XX in year') parser.add_argument('--divergence-units', type=str, choices=['mutations', 'mutations-per-site'], default='mutations-per-site', help='Units in which sequence divergences is exported.') parser.add_argument('--seed', type=int, help='seed for random number generation') parser.add_argument('--verbosity', type=int, default=1, help='treetime verbosity, between 0 and 6 (higher values more output)') parser.set_defaults(covariance=True) return parser def run(args): # check alignment type, set flags, read in if VCF is_vcf = False ref = None # node data is the dict that will be exported as json node_data = {'alignment': args.alignment} # list of node attributes that are to be exported, will grow attributes = ['branch_length', 'confidence'] try: T = read_tree(args.tree) node_data['input_tree'] = args.tree except (FileNotFoundError, InvalidTreeError) as error: print("ERROR: %s" % error, file=sys.stderr) return 1 if not args.alignment: if args.timetree: print("ERROR: alignment is required for ancestral reconstruction or timetree inference", file=sys.stderr) return 1 if args.divergence_units=='mutations': print("ERROR: alignment is required for divergence in units of mutations", file=sys.stderr) return 1 # fake alignment to appease treetime when only using it for naming nodes... from Bio import SeqRecord, Seq, Align seqs = [] for n in T.get_terminals(): seqs.append(SeqRecord.SeqRecord(seq=Seq.Seq('ACGT'), id=n.name, name=n.name, description='')) aln = Align.MultipleSeqAlignment(seqs) elif any([args.alignment.lower().endswith(x) for x in ['.vcf', '.vcf.gz']]): if not args.vcf_reference: print("ERROR: a reference Fasta is required with VCF-format alignments", file=sys.stderr) return 1 compress_seq = read_vcf(args.alignment, args.vcf_reference) aln = compress_seq['sequences'] ref = compress_seq['reference'] is_vcf = True else: aln = args.alignment from treetime import version as treetime_version print(f"augur refine is using TreeTime version {treetime_version}") # if not specified, construct default output file name with suffix _tt.nwk if args.output_tree: tree_fname = args.output_tree elif args.alignment: tree_fname = '.'.join(args.alignment.split('.')[:-1]) + '_tt.nwk' else: tree_fname = '.'.join(args.tree.split('.')[:-1]) + '_tt.nwk' if args.root and len(args.root) == 1: #if anything but a list of seqs, don't send as a list args.root = args.root[0] if args.keep_root: # This flag overrides anything specified by 'root' args.root = None if args.timetree: # load meta data and covert dates to numeric if args.metadata is None: print("ERROR: meta data with dates is required for time tree reconstruction", file=sys.stderr) return 1 try: metadata_object = Metadata(args.metadata, args.metadata_delimiters, args.metadata_id_columns) except InvalidDelimiter: raise AugurError( f"Could not determine the delimiter of {args.metadata!r}. " f"Valid delimiters are: {args.metadata_delimiters!r}. " "This can be changed with --metadata-delimiters." ) metadata = read_metadata( args.metadata, delimiters=[metadata_object.delimiter], columns=[metadata_object.id_column, METADATA_DATE_COLUMN], id_columns=[metadata_object.id_column], dtype="string", ) try: dates = get_numerical_dates(metadata, fmt=args.date_format, min_max_year=args.year_bounds) except InvalidYearBounds as error: raise AugurError(f"Invalid value for --year-bounds: {error}") # save input state string for later export for n in T.get_terminals(): if n.name in metadata.index and METADATA_DATE_COLUMN in metadata.columns: n.raw_date = metadata.at[n.name, METADATA_DATE_COLUMN] if args.date_confidence: time_inference_mode = 'always' if args.date_inference=='marginal' else 'only-final' else: time_inference_mode = 'always' if args.date_inference=='marginal' else 'never' if args.root == 'mid_point': # root at midpoint and disable downstream rerooting in TreeTime T.root_at_midpoint() args.root = None tt = refine(tree=T, aln=aln, ref=ref, dates=dates, confidence=args.date_confidence, reroot=args.root, # or 'best', # We now have a default in param spec - this just adds confusion. Tc=0.01 if args.coalescent is None else args.coalescent, #use 0.01 as default coalescent time scale use_marginal = time_inference_mode, use_fft=args.use_fft, branch_length_inference = args.branch_length_inference or 'auto', precision = 'auto' if args.precision is None else args.precision, clock_rate=args.clock_rate, clock_std=args.clock_std_dev, clock_filter_iqd=args.clock_filter_iqd, max_iter=args.max_iter, covariance=args.covariance, resolve_polytomies=(not args.keep_polytomies), stochastic_resolve=args.stochastic_resolve, verbosity=args.verbosity, rng_seed=args.seed) node_data['clock'] = {'rate': tt.date2dist.clock_rate, 'intercept': tt.date2dist.intercept, 'rtt_Tmrca': -tt.date2dist.intercept/tt.date2dist.clock_rate} # Include the standard deviation of the clock rate, if the covariance # matrix is available. if hasattr(tt.date2dist, "cov") and tt.date2dist.cov is not None: node_data["clock"]["cov"] = tt.date2dist.cov node_data["clock"]["rate_std"] = np.sqrt(tt.date2dist.cov[0, 0]) if args.coalescent=='skyline': try: skyline, conf = tt.merger_model.skyline_inferred(gen=args.gen_per_year, confidence=2) node_data['skyline'] = [[float(x) for x in skyline.x], [float(y) for y in conf[0]], [float(y) for y in skyline.y], [float(y) for y in conf[1]]] except: print( "ERROR: skyline optimization by TreeTime has failed.", "To avoid this error, try running without coalescent optimization or with `--coalescent opt` instead of `--coalescent skyline`.", file=sys.stderr ) return 1 attributes.extend(['numdate', 'clock_length', 'mutation_length', 'raw_date', 'date']) if args.date_confidence: attributes.append('num_date_confidence') else: from treetime import TreeAnc # instantiate treetime for the sole reason to name internal nodes if args.root: if args.root == 'best': print("Warning: To root without inferring a timetree, you must specify an explicit outgroup.") print("\tProceeding without re-rooting. To suppress this message, use '--keep-root'.\n") elif args.root in ['least-squares', 'oldest', 'min_dev']: raise TypeError("The rooting option '%s' is only available when inferring a timetree. Please specify an explicit outgroup."%args.root) elif args.root=="mid_point": T.root_at_midpoint() else: try: T.root_with_outgroup(args.root) except ValueError as err: raise ValueError(f"HINT: This error may be because your specified root with name '{args.root}' was not found in your alignment file") from err tt = TreeAnc(tree=T, aln=aln, ref=ref, gtr='JC69', verbose=args.verbosity, rng_seed=args.seed) node_data['nodes'] = collect_node_data(T, attributes) if args.divergence_units=='mutations-per-site': #default pass elif args.divergence_units=='mutations': if not args.timetree: tt.infer_ancestral_sequences() nuc_map = profile_maps['nuc'] def are_sequence_states_different(nuc1, nuc2): ''' determine whether two ancestral states should count as mutation for divergence estimates while correctly accounting for ambiguous nucleotides ''' if nuc1 in ['-', 'N'] or nuc2 in ['-', 'N']: return False elif nuc1 in nuc_map and nuc2 in nuc_map: return np.sum(nuc_map[nuc1]*nuc_map[nuc2])==0 else: return False for node in T.find_clades(): n_muts = len([ position for ancestral, position, derived in node.mutations if are_sequence_states_different(ancestral, derived) ]) if args.timetree: node_data['nodes'][node.name]['mutation_length'] = n_muts node_data['nodes'][node.name]['branch_length'] = n_muts else: print("ERROR: divergence unit",args.divergence_units,"not supported!", file=sys.stderr) return 1 # Export refined tree and node data tree_success = Phylo.write(T, tree_fname, 'newick', format_branch_length='%1.8f', branch_length_only=True) print("updated tree written to",tree_fname, file=sys.stdout) if args.output_node_data: node_data_fname = args.output_node_data elif args.alignment: node_data_fname = '.'.join(args.alignment.split('.')[:-1]) + '.node_data.json' else: node_data_fname = '.'.join(args.tree.split('.')[:-1]) + '.node_data.json' write_json(node_data, node_data_fname) print("node attributes written to",node_data_fname, file=sys.stdout) return 0 if tree_success else 1 augur-24.2.2/augur/sequence_traits.py000066400000000000000000000321271456376326500176450ustar00rootroot00000000000000""" Annotate sequences based on amino-acid or nucleotide signatures. """ import sys import numpy as np from treetime.vcf_utils import read_vcf from collections import defaultdict from .io.file import PANDAS_READ_CSV_OPTIONS, open_file from .utils import write_json, get_json_name def read_in_translate_vcf(vcf_file, ref_file): """ Reads in a vcf file where TRANSLATIONS have been stored and associated reference sequence fasta (to which the VCF file is mapped) This is the file output by "write_VCF_translation" below Very simple compared to the above as will never be insertion or deletion Returns a nested dict in the same format as is *input* in "write_VCF_translation" below, with a nested dict for each gene, which contains 'sequences', 'positions', and 'reference' Parameters ---------- vcf_file : str name of the vcf file to be read, can be gzipped ref_file : str name of the fasta file with the reference sequence Returns ------- dict dictionary of dictionaries with mutations of each strain for each sequence relative to the reference """ from Bio import SeqIO import numpy as np def mutation_struct(): return {'sequences':defaultdict(dict), 'positions':[], 'reference':''} prots = defaultdict(mutation_struct) posLoc = 0 refLoc = 0 altLoc = 0 sampLoc = 9 with open_file(vcf_file, mode='rt') as f: samps = [] for line in f: if line[0] != '#': # Sample names should have been extracted from '#' lines. assert len(samps) != 0 #actual data dat = line.strip().split('\t') POS = int(dat[posLoc]) REF = dat[refLoc] ALT = dat[altLoc].split(',') GENE = dat[0] #'CHROM' or the gene name here calls = np.array(dat[sampLoc:]) #get samples that differ from Ref at this site recCalls = {} for sname, sa in zip(samps, calls): if sa != '.': recCalls[sname] = sa #store position and the altLoc for seq, gen in recCalls.items(): alt = str(ALT[int(gen[0])-1]) #get the index of the alternate ref = REF pos = POS-1 #VCF numbering starts from 1, but Reference seq numbering #will be from 0 because it's python! gene = GENE #from CHROM, gene name #will never be insertion or deletion! because translation. prots[gene]['sequences'][seq][pos] = alt prots[gene]['positions'].append(pos) elif line[0] == '#' and line[1] == 'C': #header line, get all the information header = line.strip().split('\t') posLoc = header.index("POS") refLoc = header.index("REF") altLoc = header.index("ALT") sampLoc = header.index("FORMAT")+1 samps = header[sampLoc:] nsamp = len(samps) for refSeq in SeqIO.parse(ref_file, format='fasta'): prots[refSeq.name]['reference'] = str(refSeq.seq) posN = np.unique(prots[refSeq.name]['positions']) prots[refSeq.name]['positions'] = list(posN) return prots def read_in_features(drm_file): ''' Reads in and stores position, alt base/AA, feature, gene, and 'display name' (optional) of mutations such as drug-resistance mutations Format to map by both nucleotide and AA sites: ==== ======= === ============ ===================== GENE SITE ALT DISPLAY_NAME FEATURE ==== ======= === ============ ===================== gyrB 461 N Fluoroquinolones nuc 1472358 T rrs: C513T Streptomycin nuc 1673425 T fabG1: C-15T Isoniazid Ethionamide ethA 175 T Ethionamide ==== ======= === ============ ===================== Format to map by AA site: ==== ==== === ================ GENE SITE ALT FEATURE ==== ==== === ================ gyrB 461 N Fluoroquinolones gyrB 499 D Fluoroquinolones rpoB 170 F Rifampicin rpoB 359 A Rifampicin ==== ==== === ================ Format to map by nucleotide site: ====== === ============ ================ SITE ALT DISPLAY_NAME FEATURE ====== === ============ ================ 6505 T D461N Fluoroquinolones 6505 C D461N Fluoroquinolones 760314 T V170F Rifampicin 760882 C V359A Rifampicin ====== === ============ ================ Or to map by nucleotide site and display mutations: ====== === ================ SITE ALT FEATURE ====== === ================ 6505 T Fluoroquinolones 6505 C Fluoroquinolones 760314 T Rifampicin 760882 C Rifampicin ====== === ================ Parameters ---------- drm_file : str file defining sequence features to be used for annotations Returns ------- dict dict of dict with sequence features index by gene name, position, and character state ''' import pandas as pd MUTs = defaultdict(lambda:defaultdict(dict)) mutPositions = defaultdict(list) df = pd.read_csv(drm_file, sep='\t' if drm_file.endswith('.tsv') else ',', **PANDAS_READ_CSV_OPTIONS) for mi, m in df.iterrows(): pos = m.SITE-1 #put in python numbering gene = m.GENE if hasattr(m, 'GENE') else 'nuc' mutPositions[gene].append(pos) MUTs[gene][pos][m.ALT] = {'feature':m.FEATURE.split()} if hasattr(m, "DISPLAY_NAME") and not m.isnull().DISPLAY_NAME: MUTs[gene][pos][m.ALT]['display_name'] = m.DISPLAY_NAME for gene in mutPositions: mutPositions[gene] = np.unique(mutPositions[gene]) return MUTs def annotate_strains_by_gene(annotations, features, sequences, gene='nuc'): """Sort through all potential features and link them up with mutations to produce an annotation Parameters ---------- annotations : dict dictionary of sequence features as read in by `read_in_features`. This is modified in place features : dict dictionary of features in one gene sequences : dict sequences of that gene gene : str, optional name of the gene """ for pos, info in features.items(): # annotated positions in gene # is the site mutated anywhere in the dataset? if pos in sequences['positions']: # loop over sequences in dataset for seq_name, muts in sequences['sequences'].items(): # if position mutated to the right base/aa if pos in muts and muts[pos] in info: der = muts[pos] anc = sequences['reference'][pos] feat = info[der]['feature'] if 'display_name' in info[der]: label = info[der]['display_name'] elif gene=='nuc': label = anc+str(pos+1)+der else: label = gene+": "+anc+str(pos+1)+der annotations[seq_name][label] = feat #need to record those with no mutations so they can be given zero counts later for seq_name in sequences['sequences'].keys(): if seq_name not in annotations: annotations[seq_name] = {} def annotate_strains(all_features, all_sequences): ''' Looks for DRM mutations which match in position and alt base in the translated protein dict Parameters ---------- all_features : dict dict of all features in all genes, will be processed gene by gene all_sequences : dict sequence dict of all genes Returns ------- dict annotations based on the strains for each feature ''' annotations = defaultdict(dict) for gene, features in all_features.items(): # loop over genes if gene in all_sequences: # this updates annotations in place! annotate_strains_by_gene(annotations, features, all_sequences[gene], gene=gene) return annotations def attach_features(annotations, label, count): ''' 'Attaches' features to nodes and lists the corresponding mutations as values, that is: {nodename:{"Resistance 1":"mut1,mut2", "Resistance 2":"mut1"}} Parameters ---------- annotations : dict annotations fo stgrains as globed together by `annotate_strains` label : str label of the feature set as specified by as command line argument count : str if equal to traits, will count the number of distinct features that occur in the annotation, otherwise will count the total number of mutations Returns ------- dict json/dict to export ''' seq_feature_dict = defaultdict(lambda: {label: 0 }) for seq, anno in annotations.items(): muts = 0 for mut, features in anno.items(): for feat in features: muts += 1 if feat in seq_feature_dict[seq]: seq_feature_dict[seq][feat] += ","+str(mut) else: seq_feature_dict[seq][feat] = mut if count == "traits": numResist = len(set(seq_feature_dict[seq].keys()))-1 else: numResist = muts seq_feature_dict[seq][label] = numResist return seq_feature_dict def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("sequence-traits", help=__doc__) parser.add_argument('--ancestral-sequences', type=str, help="nucleotide alignment (VCF) to search for sequence traits in (can be generated from 'ancestral' using '--output-vcf')") parser.add_argument('--translations', type=str, help="AA alignment to search for sequence traits in (can include ancestral sequences)") parser.add_argument('--vcf-reference', type=str, help='fasta file of the sequence the nucleotide VCF was mapped to') parser.add_argument('--vcf-translate-reference', type=str, help='fasta file of the sequence the translated VCF was mapped to') parser.add_argument('--features', type=str, help='file that specifies sites defining the features in a tab-delimited format: "GENE SITE ALT DISPLAY_NAME FEATURE". For nucleotide sites, GENE can be "nuc" (or column excluded entirely for all-nuc sites). "DISPLAY_NAME" can be blank or excluded entirely.') parser.add_argument('--count', type=str, choices=['traits','mutations'], default='traits', help='Whether to count traits (ex: # drugs resistant to) or mutations') parser.add_argument('--label', type=str, default="# Traits", help='How to label the counts (ex: Drug_Resistance)') parser.add_argument('--output-node-data', type=str, help='name of JSON file to save sequence features to') return parser def run(args): ''' This should be modified to work on Fasta-input files!! ''' print("This method may change in future! Please use 'augur sequence-traits -h' to check the latest options.") print("Unfortunately this method currently only works with VCF input.") ## check file format and read in sequences is_vcf = False if ( (args.ancestral_sequences and any([args.ancestral_sequences.lower().endswith(x) for x in ['.vcf', '.vcf.gz']])) or (args.translations and any([args.translations.lower().endswith(x) for x in ['.vcf', '.vcf.gz']])) ): if ((args.ancestral_sequences and not args.vcf_reference) or (args.translations and not args.vcf_translate_reference)): print("ERROR: a reference Fasta is required with VCF-format alignments") return 1 is_vcf = True compress_seq = defaultdict(dict) if args.translations: compress_seq = read_in_translate_vcf(args.translations, args.vcf_translate_reference) if args.ancestral_sequences: compress_seq["nuc"] = read_vcf(args.ancestral_sequences, args.vcf_reference) else: # TO-DO fill in fasta-format processing aln = args.ancestral_sequences print("\nERROR: Unfortunately this feature currently only works with VCF input! It will be expanded to work with Fasta-input soon.") return 1 features = read_in_features(args.features) annotations = annotate_strains(features, compress_seq) #convert the annotations into string label that auspice can display seq_features = attach_features(annotations, args.label, args.count) #write out json out_name = get_json_name(args) write_json({"nodes":seq_features},out_name) print("sequence traits written to", out_name, file=sys.stdout) augur-24.2.2/augur/titer_model.py000066400000000000000000001366241456376326500167650ustar00rootroot00000000000000import os import numpy as np from collections import defaultdict from pprint import pprint import sys from augur.io.file import open_file TITER_ROUND=4 class InsufficientDataException(Exception): pass class TiterCollection(object): """ Container for raw titer values and methods for analyzing these values. """ @staticmethod def load_from_file(filenames, excluded_sources=None): """Load titers from a tab-delimited file. Parameters ---------- filename : str tab-delimited file containing titer strains, serum, and values excluded_sources : list of str sources in the titers file to exclude Returns ------- tuple tuple of a dict of titer measurements, list of strains, list of sources Examples -------- >>> measurements, strains, sources = TiterCollection.load_from_file("tests/data/titer_model/h3n2_titers_subset.tsv") >>> type(measurements) >>> len(measurements) 11 >>> len(strains) 13 >>> len(sources) 5 Inspect specific measurements. First, inspect a measurement that has a specific value in the input. >>> measurements[("A/Acores/11/2013", ("A/Alabama/5/2010", "F27/10"))] [80.0] Next, inspect a measurement that has a thresholded value at the lower bound of detection (e.g., "<80"). This measurement should be reported as one half of its threshold value (e.g., 40.0). >>> measurements[("A/Acores/11/2013", ("A/Victoria/208/2009", "F7/10"))] [40.0] Inspect a measurement that has a thresholded value at the upper bound of detection (">1280"). This measurement should be reported as twice its threshold value (e.g., 2560.0). >>> measurements[("A/Acores/SU43/2012", ("A/Texas/50/2012", "F36/12"))] [2560.0] Confirm that excluding sources produces fewer measurements. >>> measurements, strains, sources = TiterCollection.load_from_file("tests/data/titer_model/h3n2_titers_subset.tsv", excluded_sources=["NIMR_Sep2013_7-11.csv"]) >>> len(measurements) 5 Request measurements for a test/reference/serum tuple that should not exist after excluding its source. >>> measurements.get(("A/Acores/11/2013", ("A/Alabama/5/2010", "F27/10"))) >>> Missing titer data should produce an error. >>> output = TiterCollection.load_from_file("tests/data/titer_model/missing.tsv") Traceback (most recent call last): File "", line 1, in open("tests/data/titer_model/missing.tsv", "r") FileNotFoundError: [Errno 2] No such file or directory: 'tests/data/titer_model/missing.tsv' """ if excluded_sources is None: excluded_sources = [] measurements = defaultdict(list) strains = set() sources = set() titer_files = [filenames] if type(filenames)==str else filenames for fname in titer_files: with open_file(fname, 'r') as infile: for line in infile: entries = line.strip().split('\t') titer = entries[4] try: # Convert values below or above the measurement # threshold (e.g., "<80" or ">2560") to half or twice # their thresholded value, respectively, so they can be # included in models instead of being discarded. if titer.startswith("<"): val = float(titer[1:]) / 2 elif titer.startswith(">"): val = float(titer[1:]) * 2 else: val = float(titer) except ValueError: continue test, ref_virus, serum, src_id = (entries[0], entries[1],entries[2], entries[3]) ref = (ref_virus, serum) if src_id not in excluded_sources: try: measurements[(test, (ref_virus, serum))].append(val) strains.update([test, ref_virus]) sources.add(src_id) except: print(line.strip()) print("Read titers from %s, found:" % ' '.join(titer_files), file=sys.stderr) print(" --- %i strains" % len(strains), file=sys.stderr) print(" --- %i data sources" % len(sources), file=sys.stderr) print(" --- %i total measurements" % sum([len(x) for x in measurements.values()]), file=sys.stderr) return dict(measurements), list(strains), list(sources) @staticmethod def count_strains(titers): """Count test and reference virus strains in the given titers. Parameters ---------- titers : collections.defaultdict titer measurements indexed by test, reference, and serum Returns ------- dict number of measurements per strain Examples -------- >>> measurements, strains, sources = TiterCollection.load_from_file("tests/data/titer_model/h3n2_titers_subset.tsv") >>> titer_counts = TiterCollection.count_strains(measurements) >>> titer_counts["A/Acores/11/2013"] 6 >>> titer_counts["A/Acores/SU43/2012"] 3 >>> titer_counts["A/Cairo/63/2012"] 2 """ counts = defaultdict(int) for key in titers.keys(): measurements = len(titers[key]) counts[key[0]] += measurements return counts @staticmethod def filter_strains(titers, strains): """Filter the given titers to only include values from the given strains (test or reference). Parameters ---------- titers : dict titer values indexed by test and reference strain and serum strains : list names of strains to keep titers for Returns ------- dict reduced dictionary of titer measurements containing only those were test and reference virus are part of the strain list Examples -------- >>> measurements, strains, sources = TiterCollection.load_from_file("tests/data/titer_model/h3n2_titers_subset.tsv") >>> len(measurements) 11 Test the case when a test strain exists in the subset but the none of its corresponding reference strains do. >>> len(TiterCollection.filter_strains(measurements, ["A/Acores/11/2013"])) 0 Test when both the test and reference strains exist in the subset. >>> len(TiterCollection.filter_strains(measurements, ["A/Acores/11/2013", "A/Alabama/5/2010", "A/Athens/112/2012"])) 2 >>> len(TiterCollection.filter_strains(measurements, ["A/Acores/11/2013", "A/Acores/SU43/2012", "A/Alabama/5/2010", "A/Athens/112/2012"])) 3 >>> len(TiterCollection.filter_strains(measurements, [])) 0 """ return {key: value for key, value in titers.items() if key[0] in strains and key[1][0] in strains} def __init__(self, titers, **kwargs): """Accepts the name of a file containing titers to load or a preloaded titers dictionary. Parameters ---------- titers **kwargs """ self.kwargs = kwargs # Assign titers and prepare list of strains. if (isinstance(titers, str) and os.path.isfile(titers))\ or isinstance(titers, list): self.read_titers(titers) else: self.titers = titers strain_counts = type(self).count_strains(titers) self.strains = strain_counts.keys() def read_titers(self, fname): self.titer_fname = fname if "excluded_tables" in self.kwargs: self.excluded_tables = self.kwargs["excluded_tables"] else: self.excluded_tables = [] self.titers, self.strains, self.sources = type(self).load_from_file( fname, self.excluded_tables ) def normalize(self, ref, val): ''' take the log2 difference of test titers and autologous titers Parameters ---------- ref val ''' consensus_func = np.mean return consensus_func(np.log2(self.autologous_titers[ref]['val'])) \ - consensus_func(np.log2(val)) def determine_autologous_titers(self): ''' scan the titer measurements for autologous (self) titers and make a dictionary stored in self to look them up later. If no autologous titer is found, use the maximum titer. This follows the rationale that test titers are generally lower than autologous titers and the highest test titer is often a reasonably approximation of the autologous titer. ''' autologous = defaultdict(list) all_titers_per_serum = defaultdict(list) for (test, ref), val in self.titers.items(): all_titers_per_serum[ref].append(val) if ref[0]==test: autologous[ref].append(val) self.autologous_titers = {} for serum in all_titers_per_serum: if serum in autologous: self.autologous_titers[serum] = {'val':autologous[serum], 'autologous':True} #print("autologous titer found for",serum) else: # use max tier if there are at least 10 measurements, don't bother otherwuise if len(all_titers_per_serum[serum])>10: autologous_proxy = np.percentile([np.median(x) for x in all_titers_per_serum[serum]],90) self.autologous_titers[serum] = {'val':autologous_proxy, 'autologous':False} print(serum,": using 90% percentile instead of autologous,", autologous_proxy) else: pass # print("discarding",serum,"since there are only ", # len(all_titers_per_serum[serum]),'measurements') def normalize_titers(self): ''' convert the titer measurements into the log2 difference between the average titer measured between test virus and reference serum and the average homologous titer. all measurements relative to sera without homologous titer are excluded ''' self.determine_autologous_titers() self.titers_normalized = {} self.consensus_titers_raw = {} self.measurements_per_serum = defaultdict(int) for (test, ref), val in self.titers.items(): if ref in self.autologous_titers: # use only titers for which estimates of the autologous titer exists self.titers_normalized[(test, ref)] = self.normalize(ref, val) self.consensus_titers_raw[(test, ref)] = np.median(val) self.measurements_per_serum[ref]+=1 else: pass #print("no homologous titer found:", ref) def strain_census(self, titers): """ make lists of reference viruses, test viruses and sera (there are often multiple sera per reference virus) Examples -------- >>> measurements, strains, sources = TiterCollection.load_from_file("tests/data/titer_model/h3n2_titers_subset.tsv") >>> titers = TiterCollection(measurements) >>> sera, ref_strains, test_strains = titers.strain_census(measurements) >>> len(sera) 9 >>> len(ref_strains) 9 >>> len(test_strains) 13 Parameters ---------- titers """ sera = set() ref_strains = set() test_strains = set() for test, ref in titers: test_strains.add(test) test_strains.add(ref[0]) sera.add(ref) ref_strains.add(ref[0]) return list(sera), list(ref_strains), list(test_strains) class TiterModel(object): ''' this class fits a linear model to titer measurements using different models that describe titer differences in a parsimonious way. Two additive models are currently implemented, the tree and the substitution model. The tree model describes titer drops as a sum of terms associated with branches in the tree, while the substitution model attributes titer drops to amino acid mutations. More details on the methods can be found in Neher et al, PNAS, 2016 ''' def __init__(self, serum_Kc=0, **kwargs): ''' default constructor assumes a Bio.Phylo tree as first positional argument and a dictionay of titer measurements as second positional argument. This dictionary has composite keys consisting of the (test_virus_strain_name, (reference_virus_strain_name, serum_id)) Parameters ---------- serum_Kc : int, optional optional argument that can be used to even out contribution of sera. should be roughly the inverse of the number of measurements beyond which the contribution of a serum should saturate **kwargs other keyword arguments ''' self.kwargs = kwargs self.serum_Kc = serum_Kc def assign_titers(self, titers, strains): # Load titer measurements from a file or from a given dictionary of # measurements. if (isinstance(titers, str) and os.path.isfile(titers))\ or isinstance(titers, list): titer_measurements, in_strains, sera = TiterCollection.load_from_file(titers) else: titer_measurements = titers # Filter titer measurements to those from strains in the strain list. filtered_titer_measurements = TiterCollection.filter_strains( titer_measurements, strains ) # Create a titer collection for the filtered titer measurements. self.titers = TiterCollection(filtered_titer_measurements) # Normalize titers. self.titers.normalize_titers() # Determine distinct sera, reference strains, and test strains. self.sera, self.ref_strains, self.test_strains = self.titers.strain_census(self.titers.titers_normalized) print("Normalized titers and restricted to measurements in list:") self.titer_stats() def titer_stats(self): print(" - remaining data set") print(' ---', len(self.ref_strains), " reference virues") print(' ---', len(self.sera), " sera") print(' ---', len(self.test_strains), " test_viruses") print(' ---', len(self.titers.titers_normalized), " non-redundant test virus/serum pairs") if hasattr(self, 'train_titers'): print(' ---', len(self.train_titers), " measurements in training set") def make_training_set(self, training_fraction=1.0, subset_strains=False, **kwargs): if training_fraction<1.0: # validation mode, set aside a fraction of measurements to validate the fit self.test_titers, self.train_titers = {}, {} if subset_strains: # exclude a fraction of test viruses as opposed to a fraction of the titers from random import sample tmp = set(self.test_strains) tmp.difference_update(self.ref_strains) # don't use references viruses in the set to sample from training_strains = sample(tmp, int(training_fraction*len(tmp))) for tmpstrain in self.ref_strains: # add all reference viruses to the training set if tmpstrain not in training_strains: training_strains.append(tmpstrain) for key, val in self.titers.titers_normalized.items(): if key[0] in training_strains: self.train_titers[key]=val else: self.test_titers[key]=val else: # simply use a fraction of all measurements for testing for key, val in self.titers.titers_normalized.items(): if np.random.uniform()>training_fraction: self.test_titers[key]=val else: self.train_titers[key]=val else: # without the need for a test data set, use the entire data set for training self.train_titers = self.titers.titers_normalized self.sera, self.ref_strains, self.test_strains = self.titers.strain_census(self.train_titers) print("Made training data as fraction",training_fraction, "of all measurements") self.titer_stats() def _train(self, method='nnl1reg', lam_drop=1.0, lam_pot = 0.5, lam_avi = 3.0, **kwargs): ''' determine the model parameters -- lam_drop, lam_pot, lam_avi are the regularization parameters. Parameters ---------- method : str, optional lam_drop : float, optional lam_pot : float, optional lam_avi : float, optional **kwargs ''' self.lam_pot = lam_pot self.lam_avi = lam_avi self.lam_drop = lam_drop if len(self.train_titers)==0: raise InsufficientDataException("Error: No titers in training set.") else: if method=='l1reg': # l1 regularized fit, no constraint on sign of effect self.model_params = self.fit_l1reg() elif method=='nnls': # non-negative least square, not regularized self.model_params = self.fit_nnls() elif method=='nnl2reg': # non-negative L2 norm regularized fit self.model_params = self.fit_nnl2reg() elif method=='nnl1reg': # non-negative fit, branch terms L1 regularized, avidity terms L2 regularized self.model_params = self.fit_nnl1reg() print('rms deviation on training set=',np.sqrt(self.fit_func())) # extract and save the potencies and virus effects. The genetic parameters # are subclass specific and need to be process by the subclass self.serum_potency = {serum:self.model_params[self.genetic_params+ii] for ii, serum in enumerate(self.sera)} self.virus_effect = {strain:self.model_params[self.genetic_params+len(self.sera)+ii] for ii, strain in enumerate(self.test_strains)} def fit_func(self): return np.mean( (self.titer_dist - np.dot(self.design_matrix, self.model_params))**2 ) def validate(self, plot=False, cutoff=0.0, validation_set = None, fname=None): ''' predict titers of the validation set (separate set of test_titers aside previously) and compare against known values. If requested by plot=True, a figure comparing predicted and measured titers is produced Compute basic error metrics for actual vs. predicted titer values. Return a dictionary of {'metric': computed_metric, 'values': [(actual, predicted), ...]}, save a copy in self.validation Parameters ---------- plot : bool, optional cutoff : float, optional validation_set : None, optional fname : None, optional ''' from scipy.stats import linregress, pearsonr if validation_set is None: validation_set=self.test_titers validation = {} for key, val in validation_set.items(): pred_titer = self.predict_titer(key[0], key[1], cutoff=cutoff) validation[key] = (val, pred_titer) validation_array = np.array(validation.values()) actual = validation_array[:,0] predicted = validation_array[:,1] regression = linregress(actual, predicted) model_performance = { 'slope': regression[0], 'intercept': regression[1], 'r_squared': pearsonr(actual, predicted)[0]**2, 'abs_error': np.mean(np.abs(actual-predicted)), 'rms_error': np.sqrt(np.mean((actual-predicted)**2)), } pprint(model_performance) model_performance['values'] = validation.values() self.validation = model_performance if plot: try: import matplotlib.pyplot as plt import seaborn as sns except ImportError: print("Plotting requires a working matplotlib and seaborn installation.") else: fs=16 sns.set_style('darkgrid') plt.figure() ax = plt.subplot(111) plt.plot([-1,6], [-1,6], 'k') plt.scatter(actual, predicted) plt.ylabel(r"predicted $\log_2$ distance", fontsize = fs) plt.xlabel(r"measured $\log_2$ distance" , fontsize = fs) ax.tick_params(axis='both', labelsize=fs) plt.text(-2.5,6,'regularization:\nprediction error:\nR^2:', fontsize = fs-2) plt.text(1.2,6, str(self.lam_drop)+'/'+str(self.lam_pot)+'/'+str(self.lam_avi)+' (HI/pot/avi)' +'\n'+str(round(model_performance['abs_error'], 2))+'/'+str(round(model_performance['rms_error'], 2))+' (abs/rms)' + '\n' + str(model_performance['r_squared']), fontsize = fs-2) plt.tight_layout() if fname: plt.savefig(fname) return model_performance def reference_virus_statistic(self): ''' count measurements for every reference virus and serum ''' def dstruct(): return defaultdict(int) self.titer_counts = defaultdict(dstruct) for test_vir, (ref_vir, serum) in self.titers.titers_normalized: self.titer_counts[ref_vir][serum]+=1 def compile_titers(self): ''' compiles titer measurements into a json file organized by reference virus during visualization, we need the average distance of a test virus from a reference virus across sera. hence the hierarchy [ref][test][serum] NOTE: this uses node.name instead of node.clade ''' def dstruct(): return defaultdict(dict) titer_json = defaultdict(dstruct) for key, val in self.titers.titers_normalized.items(): test_clade, (ref_clade, serum) = key titer_json[ref_clade][test_clade][serum] = [np.round(val,TITER_ROUND), np.median(self.titers.titers[key])] return titer_json def compile_potencies(self): ''' compile a json structure containing potencies for visualization we need rapid access to all sera for a given reference virus, hence the structure is organized by [ref][serum] ''' potency_json = defaultdict(dict) for (ref_clade, serum), val in self.serum_potency.items(): potency_json[ref_clade][serum] = np.round(val,TITER_ROUND) # add the average potency (weighed by the number of measurements per serum) # to the exported data structure self.reference_virus_statistic() mean_potency = defaultdict(int) for (ref_vir, serum), val in self.serum_potency.items(): mean_potency[ref_vir] += self.titer_counts[ref_vir][serum]*val for ref_vir in self.ref_strains: potency_json[ref_vir]['mean_potency'] = 1.0*mean_potency[ref_vir]/np.sum(list(self.titer_counts[ref_vir].values())) return potency_json def compile_virus_effects(self): ''' compile a json structure containing virus_effects for visualization ''' return {test_vir:np.round(val,TITER_ROUND) for test_vir, val in self.virus_effect.items()} ########################################################################################## # define fitting routines for different objective functions ########################################################################################## def fit_l1reg(self): ''' regularize genetic parameters with an l1 norm regardless of sign ''' try: from cvxopt import matrix, solvers except ImportError: raise ImportError("To infer titer models, you need a working installation of cvxopt") n_params = self.design_matrix.shape[1] n_genetic = self.genetic_params n_sera = len(self.sera) n_v = len(self.test_strains) # set up the quadratic matrix containing the deviation term (linear xterm below) # and the l2-regulatization of the avidities and potencies P1 = np.zeros((n_params+n_genetic,n_params+n_genetic)) P1[:n_params, :n_params] = self.TgT for ii in range(n_genetic, n_genetic+n_sera): P1[ii,ii]+=self.lam_pot for ii in range(n_genetic+n_sera, n_params): P1[ii,ii]+=self.lam_avi P = matrix(P1) # set up cost for auxillary parameter and the linear cross-term q1 = np.zeros(n_params+n_genetic) q1[:n_params] = -np.dot( self.titer_dist, self.design_matrix) q1[n_params:] = self.lam_drop q = matrix(q1) # set up linear constraint matrix to regularize the HI parametesr h = matrix(np.zeros(2*n_genetic)) # Gw <=h G1 = np.zeros((2*n_genetic,n_params+n_genetic)) G1[:n_genetic, :n_genetic] = -np.eye(n_genetic) G1[:n_genetic:, n_params:] = -np.eye(n_genetic) G1[n_genetic:, :n_genetic] = np.eye(n_genetic) G1[n_genetic:, n_params:] = -np.eye(n_genetic) G = matrix(G1) W = solvers.qp(P,q,G,h) return np.array([x for x in W['x']])[:n_params] def fit_nnls(self): from scipy.optimize import nnls return nnls(self.design_matrix, self.titer_dist)[0] def fit_nnl2reg(self): try: from cvxopt import matrix, solvers except ImportError: raise ImportError("To infer titer models, you need a working installation of cvxopt") n_params = self.design_matrix.shape[1] P = matrix(np.dot(self.design_matrix.T, self.design_matrix) + self.lam_drop*np.eye(n_params)) q = matrix( -np.dot( self.titer_dist, self.design_matrix)) h = matrix(np.zeros(n_params)) # Gw <=h G = matrix(-np.eye(n_params)) W = solvers.qp(P,q,G,h) return np.array([x for x in W['x']]) def fit_nnl1reg(self): '''l1 regularization of titer drops with non-negativity constraints ''' try: from cvxopt import matrix, solvers except ImportError: raise ImportError("To infer titer models, you need a working installation of cvxopt") n_params = self.design_matrix.shape[1] n_genetic = self.genetic_params n_sera = len(self.sera) n_v = len(self.test_strains) # set up the quadratic matrix containing the deviation term (linear xterm below) # and the l2-regulatization of the avidities and potencies P1 = np.zeros((n_params,n_params)) P1[:n_params, :n_params] = self.TgT for ii in range(n_genetic, n_genetic+n_sera): P1[ii,ii]+=self.lam_pot for ii in range(n_genetic+n_sera, n_params): P1[ii,ii]+=self.lam_avi P = matrix(P1) # set up cost for auxillary parameter and the linear cross-term q1 = np.zeros(n_params) q1[:n_params] = -np.dot(self.titer_dist, self.design_matrix) q1[:n_genetic] += self.lam_drop q = matrix(q1) # set up linear constraint matrix to enforce positivity of the # dTiters and bounding of dTiter by the auxillary parameter h = matrix(np.zeros(n_genetic)) # Gw <=h G1 = np.zeros((n_genetic,n_params)) G1[:n_genetic, :n_genetic] = -np.eye(n_genetic) G = matrix(G1) W = solvers.qp(P,q,G,h) return np.array([x for x in W['x']])[:n_params] ########################################################################################## # END GENERIC CLASS ########################################################################################## ########################################################################################## # TREE MODEL ########################################################################################## class TreeModel(TiterModel): """ tree_model extends titers and fits the antigenic differences in terms of contributions on the branches of the phylogenetic tree. nodes in the tree are decorated with attributes 'dTiter' that contain the estimated titer drops across the branch """ def __init__(self, tree, titers, *args, **kwargs): super(TreeModel, self).__init__(*args, **kwargs) self.tree = None self.prepare_tree(tree) strains = [x.name for x in self.tree.get_terminals()] self.assign_titers(titers, strains) def prepare_tree(self, tree): self.tree = tree # not copied, just linked # produce dictionaries that map node names to nodes regardless of capitalization self.strain_lookup = {n.name:n for n in tree.get_terminals()} self.strain_lookup.update({n.name.upper():n for n in tree.get_terminals()}) self.strain_lookup.update({n.name.lower():n for n in tree.get_terminals()}) # have each node link to its parent. this will be needed for walking up and down the tree # but should be already in place if treetime is used. self.tree.root.up=None for node in self.tree.get_nonterminals(): for c in node.clades: c.up = node def cross_validate(self, n, **kwargs): ''' For each of n iterations, randomly re-allocate titers to training and test set. Fit the model using training titers, assess performance using test titers (see TiterModel.validate) Append dictionaries of {'abs_error': , 'rms_error': , 'values': [(actual, predicted), ...], etc.} for each iteration to the model_performance list. Return model_performance, and save a copy in self.cross_validation Parameters ---------- n **kwargs ''' model_performance = [] for iteration in range(n): self.prepare(**kwargs) # randomly reassign titers to training and test sets self.train(**kwargs) # train the model performance = self.validate() # assess performance on the withheld test data. Returns {'values': [(actual, predicted), ...], 'metric': metric_value, ...} model_performance.append(performance) self.cross_validation = model_performance return self.cross_validation def prepare(self, **kwargs): self.make_training_set(**kwargs) self.find_titer_splits(criterium= kwargs['criterium'] if 'criterium' in kwargs else None) if len(self.train_titers)>1: self.make_treegraph() else: raise InsufficientDataException("TreeModel: Not enough titers in training set, found {}".format(len(self.train_titers))) def get_path_no_terminals(self, v1, v2): ''' returns the path between two tips in the tree excluding the terminal branches. Parameters ---------- v1 v2 ''' if v1 in self.strain_lookup and v2 in self.strain_lookup: p1 = [self.strain_lookup[v1]] p2 = [self.strain_lookup[v2]] for tmp_p in [p1,p2]: while tmp_p[-1].up != self.tree.root: tmp_p.append(tmp_p[-1].up) tmp_p.append(self.tree.root) tmp_p.reverse() for pi, (tmp_v1, tmp_v2) in enumerate(zip(p1,p2)): if tmp_v1!=tmp_v2: break path = [n for n in p1[pi:] if n.titer_info>1] + [n for n in p2[pi:] if n.titer_info>1] else: path = None return path def find_titer_splits(self, criterium=None): ''' walk through the tree, mark all branches that are to be included as model variables - no terminals - criterium: callable that can be used to exclude branches e.g. if amino acid mutations map to this branch. Parameters ---------- criterium : None, optional ''' if criterium is None: criterium = lambda x:True # flag all branches on the tree with titer_info = True if they lead to strain with titer data for leaf in self.tree.get_terminals(): if leaf.name in self.test_strains: leaf.serum = leaf.name in self.ref_strains leaf.titer_info = 1 else: leaf.serum, leaf.titer_info=False, 0 for node in self.tree.get_nonterminals(order='postorder'): node.titer_info = sum([c.titer_info for c in node.clades]) node.serum= False # combine sets of branches that span identical sets of titers self.titer_split_count = 0 # titer split counter self.titer_split_to_branch = defaultdict(list) for node in self.tree.find_clades(order='preorder'): node.dTiter, node.cTiter, node.constraints = 0, 0, 0 if node.titer_info>1 and criterium(node): node.titer_branch_index = self.titer_split_count self.titer_split_to_branch[node.titer_branch_index].append(node) # at a bi- or multifurcation, increase the split count and HI index # either individual child branches have enough HI info be counted, # or the pre-order node iteraction will move towards the root if sum([c.titer_info>0 for c in node.clades])>1: self.titer_split_count+=1 elif node.is_terminal(): self.titer_split_count+=1 else: node.titer_branch_index=None self.genetic_params = self.titer_split_count print("# of reference strains:",len(self.sera)) print("# of eligible branches with titer constraints", self.titer_split_count) def make_treegraph(self): ''' code the path between serum and test virus of each HI measurement into a matrix the matrix has dimensions #measurements x #tree branches with HI info if the path between test and serum goes through a branch, the corresponding matrix element is 1, 0 otherwise ''' tree_graph = [] titer_dist = [] weights = [] # mark HI splits have to have been run before, assigning self.titer_split_count n_params = self.titer_split_count + len(self.sera) + len(self.test_strains) for (test, ref), val in self.train_titers.items(): if not np.isnan(val) and not np.isinf(val): try: if ref[0] in self.strain_lookup and test in self.strain_lookup: path = self.get_path_no_terminals(test, ref[0]) tmp = np.zeros(n_params, dtype=int) # determine branch indices on path branches = np.unique([c.titer_branch_index for c in path if c.titer_branch_index is not None]) if len(branches): tmp[branches] = 1 # add serum effect for heterologous viruses if ref[0]!=test: tmp[self.titer_split_count+self.sera.index(ref)] = 1 # add virus effect tmp[self.titer_split_count+len(self.sera)+self.test_strains.index(test)] = 1 # append model and fit value to lists tree_graph and titer_dist tree_graph.append(tmp) titer_dist.append(val) weights.append(1.0/(1.0 + self.serum_Kc*self.titers.measurements_per_serum[ref])) except: import ipdb; ipdb.set_trace() print(test, ref, "ERROR") # convert to numpy arrays and save product of tree graph with its transpose for future use self.weights = np.sqrt(weights) self.titer_dist = np.array(titer_dist)*self.weights self.design_matrix = (np.array(tree_graph).T*self.weights).T self.TgT = np.dot(self.design_matrix.T, self.design_matrix) print("Found", self.design_matrix.shape, "measurements x parameters") def train(self,**kwargs): self._train(**kwargs) for node in self.tree.find_clades(order='postorder'): node.dTiter=0 # reset branch properties -- only neede for tree model node.cTiter=0 for titer_split, branches in self.titer_split_to_branch.items(): likely_branch = branches[np.argmax([b.branch_length for b in branches])] likely_branch.dTiter = self.model_params[titer_split] likely_branch.constraints = self.design_matrix[:,titer_split].sum() # integrate the tree model dTiter into a cumulative antigentic evolution score cTiter for node in self.tree.find_clades(order='preorder'): if node.up is not None: node.cTiter = node.up.cTiter + node.dTiter else: node.cTiter=0 def predict_titer(self, virus, serum, cutoff=0.0): path = self.get_path_no_terminals(virus,serum[0]) if path is not None: pot = self.serum_potency[serum] if serum in self.serum_potency else 0.0 avi = self.virus_effect[virus] if virus in self.virus_effect else 0.0 return avi + pot + np.sum([b.dTiter for b in path if b.dTiter>cutoff]) else: return None ########################################################################################## # SUBSTITUTION MODEL ########################################################################################## class SubstitutionModel(TiterModel): """ substitution_model extends titers and implements a model that seeks to describe titer differences by sums of contributions of substitions separating the test and reference viruses. Sequences are assumed to be attached to each terminal node in the tree as node.translations """ def __init__(self, alignments, titers, *args, **kwargs): super(SubstitutionModel, self).__init__(*args, **kwargs) self.sequences = defaultdict(dict) self.proteins = list(alignments.keys()) self.substitution_effect={} for gene, aln in alignments.items(): for x in aln: self.sequences[x.name][gene] = str(x.seq) strains = list(self.sequences.keys()) self.assign_titers(titers, strains) def prepare(self, **kwargs): self.make_training_set(**kwargs) self.determine_relevant_mutations() if len(self.train_titers)>1: self.make_seqgraph() else: raise InsufficientDataException("SubstitutionModel: Not enough titers in training set, found {}".format(len(self.train_titers))) def get_mutations(self, strain1, strain2): '''return amino acid mutations between viruses specified by strain names as tuples (HA1, F159S) Parameters ---------- strain1 strain2 ''' if strain1 in self.sequences and strain2 in self.sequences: muts = [] for prot in self.proteins: seq1 = self.sequences[strain1][prot] seq2 = self.sequences[strain2][prot] muts.extend([(prot, aa1+str(pos+1)+aa2) for pos, (aa1, aa2) in enumerate(zip(seq1, seq2)) if aa1!=aa2]) return muts else: return None def determine_relevant_mutations(self, min_count=10): # count how often each mutation separates a reference test virus pair self.mutation_counter = defaultdict(int) for (test, ref), val in self.train_titers.items(): muts = self.get_mutations(ref[0], test) if muts is None: continue for mut in muts: self.mutation_counter[mut]+=1 # make a list of mutations deemed relevant via frequency thresholds relevant_muts = [] for mut, count in self.mutation_counter.items(): gene = mut[0] pos = int(mut[1][1:-1])-1 aa1, aa2 = mut[1][0],mut[1][-1] if count>min_count: relevant_muts.append(mut) relevant_muts.sort() # sort by gene relevant_muts.sort(key = lambda x:int(x[1][1:-1])) # sort by position in gene self.relevant_muts = relevant_muts self.genetic_params = len(relevant_muts) def make_seqgraph(self, colin_thres = 5): ''' code amino acid differences between sequences into a matrix the matrix has dimensions #measurements x #observed mutations Parameters ---------- colin_thres : int, optional ''' seq_graph = [] titer_dist = [] weights = [] n_params = self.genetic_params + len(self.sera) + len(self.test_strains) # loop over all measurements and encode the HI model as [0,1,0,1,0,0..] vector: # 1-> mutation present, 0 not present, same for serum and virus effects for (test, ref), val in self.train_titers.items(): if not np.isnan(val) and not np.isinf(val): try: muts = self.get_mutations(ref[0], test) if muts is None: continue tmp = np.zeros(n_params, dtype=int) # zero vector, ones will be filled in # determine branch indices on path mutation_indices = np.unique([self.relevant_muts.index(mut) for mut in muts if mut in self.relevant_muts]) if len(mutation_indices): tmp[mutation_indices] = 1 # add serum effect for heterologous viruses if test!=ref[0]: tmp[self.genetic_params+self.sera.index(ref)] = 1 # add virus effect tmp[self.genetic_params+len(self.sera)+self.test_strains.index(test)] = 1 # append model and fit value to lists seq_graph and titer_dist seq_graph.append(tmp) titer_dist.append(val) # for each measurment (row in the big matrix), attach weight that accounts for representation of serum weights.append(1.0/(1.0 + self.serum_Kc*self.titers.measurements_per_serum[ref])) except: import pdb; pdb.set_trace() print(test, ref, "ERROR") # convert to numpy arrays and save product of tree graph with its transpose for future use self.weights = np.sqrt(weights) self.titer_dist = np.array(titer_dist)*self.weights self.design_matrix = (np.array(seq_graph).T*self.weights).T if colin_thres is not None and self.genetic_params > 0: self.collapse_colinear_mutations(colin_thres) self.TgT = np.dot(self.design_matrix.T, self.design_matrix) print("Found", self.design_matrix.shape, "measurements x parameters") def collapse_colinear_mutations(self, colin_thres): ''' find colinear columns of the design matrix, collapse them into clusters Parameters ---------- colin_thres ''' TT = self.design_matrix[:,:self.genetic_params].T mutation_clusters = [] n_measurements = self.design_matrix.shape[0] # a greedy algorithm: if column is similar to existing cluster -> merge with cluster, else -> new cluster for col, mut in zip(TT, self.relevant_muts): col_found = False for cluster in mutation_clusters: # similarity is defined as number of measurements at whcih the cluster and column differ if np.sum(col==cluster[0])>=n_measurements-colin_thres: cluster[1].append(mut) col_found=True print("adding",mut,"to cluster ",cluster[1]) break if not col_found: mutation_clusters.append([col, [mut]]) print("dimensions of old design matrix",self.design_matrix.shape) self.design_matrix = np.hstack((np.array([c[0] for c in mutation_clusters]).T, self.design_matrix[:,self.genetic_params:])) self.genetic_params = len(mutation_clusters) # use the first mutation of a cluster to index the effect # make a dictionary that maps this effect to the cluster self.mutation_clusters = {c[1][0]:c[1] for c in mutation_clusters} self.relevant_muts = [c[1][0] for c in mutation_clusters] print("dimensions of new design matrix",self.design_matrix.shape) def train(self,**kwargs): ''' determine the model parameters. the result will be stored in self.substitution_effect Parameters ---------- **kwargs ''' self._train(**kwargs) for mi, mut in enumerate(self.relevant_muts): self.substitution_effect[mut] = self.model_params[mi] def predict_titer(self, virus, serum, cutoff=0.0): muts= self.get_mutations(serum[0], virus) if muts is not None: pot = self.serum_potency[serum] if serum in self.serum_potency else 0.0 avi = self.virus_effect[virus] if virus in self.virus_effect else 0.0 return avi + pot\ + np.sum([self.substitution_effect[mut] for mut in muts if (mut in self.substitution_effect and self.substitution_effect[mut]>cutoff)]) else: return None def compile_substitution_effects(self, cutoff=1e-4): ''' compile a flat json of substitution effects for visualization, prune mutation without effect Parameters ---------- cutoff : float, optional ''' return {mut[0]+':'+mut[1]:np.round(val,int(-np.log10(cutoff))) for mut, val in self.substitution_effect.items() if val>cutoff} def annotate_tree(self, tree): """Annotates antigenic advance attributes to nodes of a given tree built from the same sequences used to train the model. Parameters ---------- tree : Bio.Phylo.BaseTree.Tree Returns ------- Bio.Phylo.BaseTree.Tree input tree instance with nodes annotated by per-branch and cumulative antigenic advance attributes `dTiterSub` and `cTiterSub` """ tree.root.dTiterSub = 0 tree.root.cTiterSub = 0 for node in tree.find_clades(): for child in node.clades: # Get mutations between the current node and its parent. mutations = self.get_mutations(child.name, node.name) # Calculate titer drop on the branch to the current node. child.dTiterSub = 0 for gene, mutation in mutations: child.dTiterSub += self.substitution_effect.get((gene, mutation), 0) # Calculate the cumulative titer drop from the root to the current node. child.cTiterSub = node.cTiterSub + child.dTiterSub return tree augur-24.2.2/augur/titers.py000066400000000000000000000142671456376326500157660ustar00rootroot00000000000000""" Annotate a tree with actual and inferred titer measurements. """ import sys from Bio import Phylo from .reconstruct_sequences import load_alignments from .titer_model import InsufficientDataException from .utils import write_json from .argparse_ import add_default_command def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("titers", help=__doc__) subparsers = parser.add_subparsers() add_default_command(parser) tree_model = subparsers.add_parser('tree', help='tree model') tree_model.add_argument('--titers', nargs='+', type=str, required=True, help="file with titer measurements") tree_model.add_argument('--tree', '-t', type=str, required=True, help="tree to perform fit titer model to") tree_model.add_argument('--allow-empty-model', action="store_true", help="allow model to be empty") tree_model.add_argument('--attribute-prefix', default="", help="prefix for node attributes in the JSON output including cumulative titer drop ('cTiter') and per-branch titer drop ('dTiter'). Set a prefix to disambiguate annotations from multiple tree model JSONs in the final Auspice JSON.") tree_model.add_argument('--output', '-o', type=str, required=True, help='JSON file to save titer model') tree_model.set_defaults( __command__ = infer_tree_model ) sub_model = subparsers.add_parser('sub', help='substitution model') sub_model.add_argument('--titers', nargs='+', type=str, required=True, help="file with titer measurements") sub_model.add_argument('--alignment', nargs='+', type=str, required=True, help="sequence to be used in the substitution model, supplied as fasta files") sub_model.add_argument('--gene-names', nargs='+', type=str, required=True, help="names of the sequences in the alignment, same order assumed") sub_model.add_argument('--tree', '-t', type=str, help="optional tree to annotate fit titer model to") sub_model.add_argument('--allow-empty-model', action="store_true", help="allow model to be empty") sub_model.add_argument('--attribute-prefix', default="", help="prefix for node attributes in the JSON output including cumulative titer drop ('cTiterSub') and per-substitution titer drop ('dTiterSub'). Set a prefix to disambiguate annotations from multiple substitution model JSONs in the final Auspice JSON.") sub_model.add_argument('--output', '-o', type=str, required=True, help='JSON file to save titer model') sub_model.set_defaults( __command__ = infer_substitution_model ) return parser class infer_substitution_model(): def run(args): from .titer_model import SubstitutionModel alignments = load_alignments(args.alignment, args.gene_names) TM_subs = SubstitutionModel(alignments, args.titers) try: TM_subs.prepare() TM_subs.train() subs_model = {'titers':TM_subs.compile_titers(), 'potency':TM_subs.compile_potencies(), 'avidity':TM_subs.compile_virus_effects(), 'substitution':TM_subs.compile_substitution_effects()} except InsufficientDataException: print("Unable to train substitution model.", file=sys.stderr) if args.allow_empty_model: subs_model = {'titers':TM_subs.compile_titers(), 'potency':{}, 'avidity':{}, 'substitution':{}} print("Writing empty model.", file=sys.stderr) else: print("Exiting", file=sys.stderr) sys.exit(1) # Annotate nodes with inferred titer drops, if a tree is given. if args.tree: tree = Phylo.read(args.tree, 'newick') annotated_tree = TM_subs.annotate_tree(tree) # Store annotations for export to JSON. nodes = { node.name: { f"{args.attribute_prefix}dTiterSub": node.dTiterSub, f"{args.attribute_prefix}cTiterSub": node.cTiterSub } for node in tree.find_clades() } subs_model["nodes"] = nodes # export the substitution model write_json(subs_model, args.output) print("\nInferred titer model of type 'SubstitutionModel' using augur:" "\n\tNeher et al. Prediction, dynamics, and visualization of antigenic phenotypes of seasonal influenza viruses." "\n\tPNAS, vol 113, 10.1073/pnas.1525578113\n") print("results written to", args.output) class infer_tree_model(): def run(args): from .titer_model import TreeModel T = Phylo.read(args.tree, 'newick') TM_tree = TreeModel(T, args.titers) try: TM_tree.prepare() TM_tree.train() tree_model = { 'titers':TM_tree.compile_titers(), 'potency':TM_tree.compile_potencies(), 'avidity':TM_tree.compile_virus_effects(), 'nodes':{ n.name: { f"{args.attribute_prefix}dTiter": n.dTiter, f"{args.attribute_prefix}cTiter": n.cTiter } for n in T.find_clades() } } except InsufficientDataException: print("Unable to train tree model.", file=sys.stderr) if args.allow_empty_model: print("Writing empty model.", file=sys.stderr) tree_model = {'titers':TM_tree.compile_titers(), 'potency':{}, 'avidity':{}, 'nodes':{n.name:{"dTiter": n.dTiter, "cTiter":n.cTiter} for n in T.find_clades()}} else: print("Exiting.") sys.exit(1) # export the tree model write_json(tree_model, args.output) print("\nInferred titer model of type 'TreeModel' using augur:" "\n\tNeher et al. Prediction, dynamics, and visualization of antigenic phenotypes of seasonal influenza viruses." "\n\tPNAS, vol 113, 10.1073/pnas.1525578113\n") print("results written to", args.output) augur-24.2.2/augur/traits.py000066400000000000000000000242561456376326500157610ustar00rootroot00000000000000""" Infer ancestral traits based on a tree. """ import numpy as np from collections import defaultdict import sys from .errors import AugurError from .io.file import open_file from .io.metadata import DEFAULT_DELIMITERS, DEFAULT_ID_COLUMNS, InvalidDelimiter, read_metadata from .utils import write_json, get_json_name TINY = 1e-12 def mugration_inference(tree=None, seq_meta=None, field='country', confidence=True, missing='?', sampling_bias_correction=None, weights=None): """ Infer likely ancestral states of a discrete character assuming a time reversible model. Parameters ---------- tree : str name of tree file seq_meta : pandas.DataFrame meta data associated with sequences field : str, optional meta data field to use confidence : bool, optional calculate confidence values for inferences missing : str, optional character that is to be interpreted as missing data, default='?' sampling_bias_correction : None, optional factor by which the transition rate is scaled up to counter sampling bias weights : None, optional vector of equilibrium frequencies that one expects the far ancestor to be sampled from Returns ------- T : Bio.Phylo.BaseTree.Tree Biophyton tree gtr : treetime.GTR GTR model alphabet : dict mapping of character states to """ from treetime.wrappers import reconstruct_discrete_traits from Bio import Phylo T = Phylo.read(tree, 'newick') traits = {} nodes = {n.name:n for n in T.get_terminals()} for name, meta in seq_meta.iterrows(): if field in meta and name in nodes and meta[field] != missing: traits[name] = meta[field] unique_states = list(set(traits.values())) if len(unique_states)==0: print("WARNING: no states found for discrete state reconstruction.", file=sys.stderr) for node in T.find_clades(): node.__setattr__(field, None) return T, None, {} elif len(unique_states)==1: print("WARNING: only one state found for discrete state reconstruction:", unique_states, file=sys.stderr) for node in T.find_clades(): node.__setattr__(field, unique_states[0]) return T, None, {} elif len(unique_states)<300: tt, letter_to_state, reverse_alphabet = \ reconstruct_discrete_traits(T, traits, missing_data=missing, sampling_bias_correction=sampling_bias_correction, weights=weights) else: print("ERROR: 300 or more distinct discrete states found. TreeTime is currently not set up to handle that many states.", file=sys.stderr) sys.exit(1) if tt is None: print("ERROR in discrete state reconstruction in TreeTime. Please look for errors above.", file=sys.stderr) sys.exit(1) # attach inferred states as e.g. node.region = 'africa' for node in tt.tree.find_clades(): node.__setattr__(field, letter_to_state[node.cseq[0]]) # if desired, attach entropy and confidence as e.g. node.region_entropy = 0.03 if confidence: for node in tt.tree.find_clades(): pdis = node.marginal_profile[0] S = -np.sum(pdis*np.log(pdis+TINY)) marginal = [(letter_to_state[tt.gtr.alphabet[i]], pdis[i]) for i in range(len(tt.gtr.alphabet))] marginal.sort(key=lambda x: x[1], reverse=True) # sort on likelihoods marginal = [(a, b) for a, b in marginal if b > 0.001][:4] #only take stuff over .1% and the top 4 elements conf = {a:b for a,b in marginal} node.__setattr__(field + "_entropy", S) node.__setattr__(field + "_confidence", conf) return tt.tree, tt.gtr, letter_to_state def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("traits", help=__doc__) parser.add_argument('--tree', '-t', required=True, help="tree to perform trait reconstruction on") parser.add_argument('--metadata', required=True, metavar="FILE", help="table with metadata") parser.add_argument('--metadata-delimiters', default=DEFAULT_DELIMITERS, nargs="+", help="delimiters to accept when reading a metadata file. Only one delimiter will be inferred.") parser.add_argument('--metadata-id-columns', default=DEFAULT_ID_COLUMNS, nargs="+", help="names of possible metadata columns containing identifier information, ordered by priority. Only one ID column will be inferred.") parser.add_argument('--weights', required=False, help="tsv/csv table with equilibrium probabilities of discrete states") parser.add_argument('--columns', required=True, nargs='+', help='metadata fields to perform discrete reconstruction on') parser.add_argument('--confidence',action="store_true", help='record the distribution of subleading mugration states') parser.add_argument('--sampling-bias-correction', type=float, help='a rough estimate of how many more events would have been observed' ' if sequences represented an even sample. This should be' ' roughly the (1-sum_i p_i^2)/(1-sum_i t_i^2), where p_i' ' are the equilibrium frequencies and t_i are apparent ones.' '(or rather the time spent in a particular state on the tree)') parser.add_argument('--output-node-data', type=str, help='name of JSON file to save trait inferences to') parser.epilog = "Note that missing data must be represented by a `?` character. Missing data will currently be inferred." return parser def run(args): """run mugration inference Parameters ---------- args : argparse.Namespace command line arguments are parsed by argparse """ tree_fname = args.tree try: traits = read_metadata( args.metadata, delimiters=args.metadata_delimiters, id_columns=args.metadata_id_columns, # Read all columns as string for discrete trait analysis dtype="string", ) except InvalidDelimiter: raise AugurError( f"Could not determine the delimiter of {args.metadata!r}. " f"Valid delimiters are: {args.metadata_delimiters!r}. " "This can be changed with --metadata-delimiters." ) from Bio import Phylo T = Phylo.read(tree_fname, 'newick') missing_internal_node_names = [n.name is None for n in T.get_nonterminals()] if np.all(missing_internal_node_names): print("\n*** WARNING: Tree has no internal node names!", file=sys.stderr) print("*** Without internal node names, ancestral traits can't be linked up to the correct node later.", file=sys.stderr) print("*** If you want to use 'augur export' later, re-run this command with the output of 'augur refine'.", file=sys.stderr) print("*** If you haven't run 'augur refine', you can add node names to your tree by running:", file=sys.stderr) print("*** augur refine --tree %s --output-tree .nwk" % (tree_fname), file=sys.stderr) print("*** And use .nwk as the tree when running 'ancestral', 'translate', and 'traits'", file=sys.stderr) if args.weights: weight_dict = {c:{} for c in args.columns} sep = ',' if args.weights.endswith('csv') else '\t' with open_file(args.weights, 'r') as fh: for line in fh: if line[0]=='#': continue name, trait, value = line.strip().split(sep) if name in weight_dict: weight_dict[name][trait] = float(value) for c in weight_dict: if len(weight_dict[c])==0: weight_dict[c]=None else: weight_dict = {c:None for c in args.columns} mugration_states = defaultdict(dict) models = defaultdict(dict) out_prefix = '.'.join(args.output_node_data.split('.')[:-1]) from treetime import version as treetime_version print(f"augur traits is using TreeTime version {treetime_version}") for column in args.columns: T, gtr, alphabet = mugration_inference(tree=tree_fname, seq_meta=traits, field=column, confidence=args.confidence, sampling_bias_correction=args.sampling_bias_correction, weights=weight_dict[column]) if T is None: # something went wrong continue for node in T.find_clades(): mugration_states[node.name][column] = getattr(node, column) if args.confidence: confidence = getattr(node, f"{column}_confidence", None) if confidence is not None: mugration_states[node.name][f"{column}_confidence"] = confidence entropy = getattr(node, f"{column}_entropy", None) if entropy is not None: mugration_states[node.name][f"{column}_entropy"] = entropy if gtr: # add gtr models to json structure for export models[column]['rate'] = gtr.mu models[column]['alphabet'] = [alphabet[k] for k in sorted(alphabet.keys())] models[column]['equilibrium_probabilities'] = list(gtr.Pi) models[column]['transition_matrix'] = [list(x) for x in gtr.W] if gtr: with open_file(out_prefix+'%s.mugration_model.txt'%column, 'w') as ofile: ofile.write('Map from character to field name\n') for k,v in alphabet.items(): ofile.write(k+':\t'+str(v)+'\n') ofile.write('\n\n') ofile.write(str(gtr)) out_name = get_json_name(args, out_prefix+'_traits.json') write_json({"models":models, "nodes":mugration_states},out_name) print("\nInferred ancestral states of discrete character using TreeTime:" "\n\tSagulenko et al. TreeTime: Maximum-likelihood phylodynamic analysis" "\n\tVirus Evolution, vol 4, https://academic.oup.com/ve/article/4/1/vex042/4794731\n", file=sys.stdout) print("results written to", out_name, file=sys.stdout) augur-24.2.2/augur/translate.py000066400000000000000000000531641456376326500164500ustar00rootroot00000000000000""" Translate gene regions from nucleotides to amino acids. Translates nucleotide sequences of nodes in a tree to amino acids for gene regions of the annotated features of the provided reference sequence. Each node then gets assigned a list of amino acid mutations for any position that has a mismatch between its own amino acid sequence and its parent's sequence. The reference amino acid sequences, genome annotations, and node amino acid mutations are output to a node-data JSON file. .. note:: The mutation positions in the node-data JSON are one-based. """ import sys import numpy as np from Bio import SeqIO, Seq, SeqRecord, Phylo from .io.vcf import write_VCF_translation, is_vcf as is_filename_vcf from .utils import parse_genes_argument, read_node_data, load_features, write_json, get_json_name from treetime.vcf_utils import read_vcf from augur.errors import AugurError from textwrap import dedent class MissingNodeError(Exception): pass class MismatchNodeError(Exception): pass class NoVariationError(Exception): pass def safe_translate(sequence, report_exceptions=False): """Returns an amino acid translation of the given nucleotide sequence accounting for gaps in the given sequence. Optionally, returns a tuple of the translated sequence and whether an exception was raised during initial translation. Examples -------- >>> safe_translate("ATG") 'M' >>> safe_translate("ATGGT-") 'MX' >>> safe_translate("ATG---") 'M-' >>> safe_translate("ATGTAG") 'M*' >>> safe_translate("") '' >>> safe_translate("ATGT") 'MX' >>> safe_translate("ATG", report_exceptions=True) ('M', False) >>> safe_translate("ATGA-G", report_exceptions=True) ('MX', True) """ from Bio.Data.CodonTable import TranslationError from Bio.Seq import CodonTable translation_exception = False #sequences not mod 3 give messy BiopythonWarning, so avoid by padding. if len(sequence)%3: sequence_padded = sequence + "N"*(3-len(sequence)%3) else: sequence_padded = sequence try: # Attempt translation by extracting the sequence according to the # BioPhython SeqFeature in frame gaps of three will translate as '-' translated_sequence = str(Seq.Seq(sequence_padded).translate(gap='-')) except TranslationError: translation_exception = True # Any other codon like '-AA' or 'NNT' etc will fail. Translate codons # one by one. codon_table = CodonTable.ambiguous_dna_by_name['Standard'].forward_table str_seq = str(sequence_padded) codons = np.frombuffer(str_seq[:len(str_seq) - len(str_seq) % 3].encode(), dtype='S3').astype("U") assert len(codons) > 0 aas = [] for c in codons: # Parse result of single codon translation, add amino acids as # appropriate. try: aa = codon_table.get(c) if aa is None: if c == '---': aas.append('-') else: aas.append('X') else: aas.append(aa) except (TranslationError, ValueError): aas.append('X') translated_sequence = "".join(aas) if report_exceptions: return translated_sequence, translation_exception else: return translated_sequence def translate_feature(aln, feature): ''' Translates a subsequence of input nucleotide sequences. Parameters ---------- aln : dict sequences indexed by node name feature : Bio.Seq.Seq BioPython sequence feature Returns ------- dict : translated sequences indexed by node name ''' translations = {} for sname, seq in aln.items(): aa_seq = safe_translate(str(feature.extract(seq))) translations[sname] = aa_seq return translations def translate_vcf_feature(sequences, ref, feature, feature_name): '''Translates a subsequence of input nucleotide sequences. Parameters ---------- sequences : dict TreeTime format dictionary from VCF-input of sequences indexed by node name ref : reference alignment the VCF was mapped to feature : Bio.Seq.Seq BioPython sequence feature Returns ------- dict : translated reference gene, positions of AA differences, and AA differences indexed by node name Raises ------ NoVariationError : if no variable sites within this feature (across all sequences) ''' def str_reverse_comp(str_seq): #gets reverse-compliment of a string and returns it as a string seq_str = Seq(str_seq) return str(seq_str.reverse_complement()) from Bio.Seq import Seq from Bio.SeqRecord import SeqRecord prot = {} prot['sequences'] = {} prot['positions'] = [] refNuc = str(feature.extract( SeqRecord(seq=Seq(ref)) ).seq) # Need to get ref translation to store. check if multiple of 3 for sanity. # will be padded in safe_translate if not if len(refNuc)%3: print(f"Gene length of {feature_name!r} is not a multiple of 3. will pad with N", file=sys.stderr) ref_aa_seq = safe_translate(refNuc) prot['reference'] = ref_aa_seq start = int(feature.location.start) #1 less than GFF file; Bio 'pythons' the numbering end = int(feature.location.end) for seqk in sequences.keys(): varSite = np.array(list(sequences[seqk].keys())) #get positions where nuc diffs #reduce to only those within current gene geneVarSites = np.logical_and(varSite >= start, varSite < end) nucVarSites = varSite[geneVarSites] #translate this back to nuc position genNucSites = nucVarSites-start #get it in position within the gene to ensure in frame #Translate just the codon this nuc diff is in, and find out which AA loc #But need numbering to be w/in protin, not whole genome if feature.location.strand == -1: aaRepLocs = {(end-start-i-1)//3:safe_translate( str_reverse_comp( "".join([sequences[seqk][key+start] if key+start in sequences[seqk].keys() else ref[key+start] for key in range(i-i%3,i+3-i%3)]) )) for i in genNucSites} else: aaRepLocs = {i//3:safe_translate( "".join([sequences[seqk][key+start] if key+start in sequences[seqk].keys() else ref[key+start] for key in range(i-i%3,i+3-i%3)]) ) for i in genNucSites} aaRepLocsFinal = {} #remove if is a synonymous mutation! for key,val in aaRepLocs.items(): if ref_aa_seq[key] != val: aaRepLocsFinal[key] = val aaRepLocs = aaRepLocsFinal #store the dict of differences prot['sequences'][seqk] = aaRepLocs #add to list of positions if needed for key in aaRepLocs.keys(): if key not in prot['positions']: prot['positions'].append(key) prot['positions'].sort() # raise an error if no variable sites observed if len(prot['positions']) == 0: raise NoVariationError() return prot def construct_mut(start, pos, end): return str(start) + str(pos) + str(end) def assign_aa_vcf(tree, translations): aa_muts = {} #get mutations on the root root = tree.root aa_muts[root.name]={"aa_muts":{}} #If has no root node name, exit with error if root.name is None: print("\n*** Can't find node name for the tree root!") raise MissingNodeError() for fname, prot in translations.items(): if root.name not in prot['sequences']: print("\n*** Can't find %s in the alignment provided!"%(root.name)) raise MismatchNodeError() root_muts = prot['sequences'][root.name] tmp = [] for pos in prot['positions']: if pos in root_muts: tmp.append(construct_mut(prot['reference'][pos], int(pos+1), root_muts[pos])) aa_muts[root.name]["aa_muts"][fname] = tmp for n in tree.get_nonterminals(): for c in n: aa_muts[c.name]={"aa_muts":{}} for fname, prot in translations.items(): if n.name not in prot['sequences']: print("\n*** Can't find %s in the alignment provided!"%(root.name)) raise MismatchNodeError() n_muts = prot['sequences'][n.name] for c in n: tmp = [] if c.name is None: print("\n*** Internal node missing a node name!") raise MissingNodeError() c_muts = prot['sequences'][c.name] for pos in prot['positions']: #if pos in both, check if same if pos in n_muts and pos in c_muts: if n_muts[pos] != c_muts[pos]: tmp.append(construct_mut(n_muts[pos], int(pos+1), c_muts[pos])) elif pos in n_muts: tmp.append(construct_mut(n_muts[pos], int(pos+1), prot['reference'][pos])) elif pos in c_muts: tmp.append(construct_mut(prot['reference'][pos], int(pos+1), c_muts[pos])) aa_muts[c.name]["aa_muts"][fname] = tmp aa_muts[root.name]['aa_sequences'] = {} for gene_name, gene_data in translations.items(): root_seq = list(gene_data['reference']) for pos,alt in gene_data['sequences'][root.name].items(): # pos is 0-based, root_seq[pos] = alt aa_muts[root.name]['aa_sequences'][gene_name] = "".join(root_seq) return aa_muts def assign_aa_fasta(tree, translations, reference_translations): aa_muts = {} # Depending on how `augur ancestral` was run, the input JSON (nt_muts.json) # may or may not have mutations defined on the root node. Note that the 'muts' # array will always be present, but it can only contain mutations if a # --root-sequence was provided to augur ancestral. root = tree.get_nonterminals()[0] for n in tree.get_nonterminals(): if n.name is None: print("\n*** Tree is missing node names!") raise MissingNodeError() for c in n: aa_muts[c.name]={"aa_muts":{}} for fname, aln in translations.items(): for c in n: if c.name in aln and n.name in aln: tmp = [construct_mut(a, int(pos+1), d) for pos, (a,d) in enumerate(zip(aln[n.name], aln[c.name])) if a!=d] aa_muts[c.name]["aa_muts"][fname] = tmp elif c.name not in aln and n.name not in aln: print("\n*** Can't find %s OR %s in the alignment provided!"%(c.name, n.name)) raise MismatchNodeError() else: print("no sequence pair for nodes %s-%s"%(c.name, n.name)) if n==tree.root: # The aa_sequences at the root are simply the translation from the root-node input data aa_muts[n.name]={"aa_sequences":{}} for fname, aln in translations.items(): if n.name in aln: aa_muts[n.name]["aa_sequences"][fname] = "".join(aln[n.name]) # The aa_muts are found by comparing the aa_sequence with the reference sequence aa_muts[n.name]['aa_muts'] = {} for fname, aln in translations.items(): ref = reference_translations[fname] muts = [construct_mut(a, int(pos+1), d) for pos, (a,d) in enumerate(zip(ref, aln[n.name])) if a!=d] aa_muts[n.name]["aa_muts"][fname] = muts return aa_muts def sequences_vcf(reference_fasta, vcf): """ Extract the nucleotide variation in the VCF Returns a tuple [0] The sequences as a dict of dicts. sequences → where is a 0-based int [1] The sequence of the provided `reference_fasta` (string) """ assert reference_fasta is not None compress_seq = read_vcf(vcf, reference_fasta) sequences = compress_seq['sequences'] ref = compress_seq['reference'] return (sequences, ref) def sequences_json(node_data_json, tree): """ Extract the full nuc sequence for each node in the provided node-data JSON. Returns a dict, keys are node names and values are a string of the genome sequence (nuc) """ node_data = read_node_data(node_data_json) if node_data is None: raise AugurError("could not read node data (incl sequences)") # extract sequences from node meta data sequences = {} for k,v in node_data['nodes'].items(): if 'sequence' in v: sequences[k] = v['sequence'] tree_nodes = {c.name for c in tree.find_clades()} tree_nodes_missing_sequences = tree_nodes - set(sequences.keys()) if len(tree_nodes_missing_sequences): raise AugurError(dedent(f"""\ {len(tree_nodes_missing_sequences)} nodes on the tree are missing nucleotide sequences in the node-data JSON. These must be present under 'nodes' → → 'sequence'. This error may originate from using 'augur ancestral' with VCF input; in this case try using VCF output from that command here. """)) reference = node_data['reference']['nuc'] return (reference, sequences) def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("translate", help=__doc__) parser.add_argument('--tree', required=True, help="prebuilt Newick -- no tree will be built if provided") parser.add_argument('--ancestral-sequences', required=True, type=str, help='JSON (fasta input) or VCF (VCF input) containing ancestral and tip sequences') parser.add_argument('--reference-sequence', required=True, help='GenBank or GFF file containing the annotation') parser.add_argument('--genes', nargs='+', help="genes to translate (list or file containing list)") parser.add_argument('--output-node-data', type=str, help='name of JSON file to save aa-mutations to') parser.add_argument('--alignment-output', type=str, help="write out translated gene alignments. " "If a VCF-input, a .vcf or .vcf.gz will be output here (depending on file ending). If fasta-input, specify the file name " "like so: 'my_alignment_%%GENE.fasta', where '%%GENE' will be replaced by the name of the gene") vcf_only = parser.add_argument_group( title="VCF specific", description="These arguments are only applicable if the input (--ancestral-sequences) is in VCF format." ) vcf_only.add_argument('--vcf-reference', type=str, help='fasta file of the sequence the VCF was mapped to') vcf_only.add_argument('--vcf-reference-output', type=str, help="fasta file where reference sequence translations for VCF input will be written") return parser def check_arg_combinations(args, is_vcf): """ Check that provided arguments are compatible. Where possible we use argparse built-ins, but they don't cover everything we want to check. This checking shouldn't be used by downstream code to assume arguments exist, however by checking for invalid combinations up-front we can exit quickly. """ if is_vcf: if not args.vcf_reference: raise AugurError("A reference FASTA (--vcf-reference) is required with VCF-format input") else: if args.vcf_reference or args.vcf_reference_output: raise AugurError("Arguments '--vcf-reference' and/or '--vcf-reference-output' are only applicable if the input ('--ancestral-sequences') is VCF") if args.alignment_output: if is_vcf: if not is_filename_vcf(args.alignment_output): raise AugurError("When using a VCF input the --alignment-output filename must also be a VCF file") if not args.vcf_reference_output: raise AugurError("When using a VCF input and --alignment-output, we now require you to specify the --vcf-reference-output as well") else: if is_filename_vcf(args.alignment_output): raise AugurError("When using a non-VCF input the --alignment-output filename must not be a VCF file") if args.vcf_reference_output and not args.alignment_output: raise AugurError("The VCF reference output (--vcf-reference-output) needs --alignment-output") def run(args): ## read tree and data, if reading data fails, return with error code tree = Phylo.read(args.tree, 'newick') is_vcf = is_filename_vcf(args.ancestral_sequences) check_arg_combinations(args, is_vcf) genes = parse_genes_argument(args.genes) ## load features; only requested features if genes given features = load_features(args.reference_sequence, genes) print("Read in {} features from reference sequence file".format(len(features))) ## Read in sequences & for each sequence translate each feature _except for_ the 'nuc' feature name ## Note that except for the 'nuc' annotation, `load_features` _only_ looks for 'gene' (GFF files) or 'CDS' (GenBank files) ## The reference translations are straight translations of the "reference.nuc" sequence in the JSON ## (see for more details here), _or_ for VCF input a translation ## from the provided FASTA reference translations = {} reference_translations = {} if is_vcf: (sequences, ref) = sequences_vcf(args.vcf_reference, args.ancestral_sequences) features_without_variation = [] for fname, feat in features.items(): if fname=='nuc': continue try: translations[fname] = translate_vcf_feature(sequences, ref, feat, fname) reference_translations[fname] = translations[fname]['reference'] except NoVariationError: features_without_variation.append(fname) if len(features_without_variation): print("{} genes had no mutations and so have been be excluded.".format(len(features_without_variation))) else: (reference, sequences) = sequences_json(args.ancestral_sequences, tree) translations = {fname: translate_feature(sequences, feat) for fname, feat in features.items() if fname!='nuc'} for fname, feat in features.items(): if fname=='nuc': continue reference_translations[fname] = safe_translate(str(feat.extract(reference))) ## glob the annotations for later auspice export # # Note that BioPython FeatureLocations use # "Pythonic" coordinates: [zero-origin, half-open) # Starting with augur v6 we use GFF coordinates: [one-origin, inclusive] annotations = { 'nuc': {'start': features['nuc'].location.start+1, 'end': features['nuc'].location.end, 'strand': '+', 'type': features['nuc'].type, # (unused by auspice) 'seqid': args.reference_sequence} # (unused by auspice) } for fname, feat in features.items(): annotations[fname] = {'seqid':args.reference_sequence, 'type':feat.type, 'start':int(feat.location.start)+1, 'end':int(feat.location.end), 'strand': {+1:'+', -1:'-', 0:'?', None:None}[feat.location.strand]} ## determine amino acid mutations for each node try: if is_vcf: aa_muts = assign_aa_vcf(tree, translations) else: aa_muts = assign_aa_fasta(tree, translations, reference_translations) except MissingNodeError as err: print("\n*** ERROR: Some/all nodes have no node names!") print("*** Please check you are providing the tree output by 'augur refine'.") print("*** If you haven't run 'augur refine', please add node names to your tree by running:") print("*** augur refine --tree %s --output-tree .nwk"%(args.tree) ) print("*** And use .nwk as the tree when running 'ancestral', 'translate', and 'traits'") return 1 except MismatchNodeError as err: print("\n*** ERROR: Mismatch between node names in %s and in %s"%(args.tree, args.ancestral_sequences)) print("*** Ensure you are using the same tree you used to run 'ancestral' as input here.") print("*** Or, re-run 'ancestral' using %s, then use the new %s as input here."%(args.tree, args.ancestral_sequences)) return 1 output_data = {'annotations':annotations, 'nodes':aa_muts, 'reference': reference_translations} out_name = get_json_name(args, '.'.join(args.tree.split('.')[:-1]) + '_aa-mutations.json') write_json(output_data, out_name) print("amino acid mutations written to", out_name, file=sys.stdout) ## write alignments to file if requested if args.alignment_output: if is_vcf: assert is_filename_vcf(args.alignment_output) assert args.vcf_reference_output is not None write_VCF_translation(translations, args.alignment_output, args.vcf_reference_output) else: ## write fasta-style output if requested if '%GENE' in args.alignment_output: for fname, seqs in translations.items(): SeqIO.write([SeqRecord.SeqRecord(seq=Seq.Seq(s), id=sname, name=sname, description='') for sname, s in seqs.items()], args.alignment_output.replace('%GENE', fname), 'fasta') else: print("ERROR: alignment output file does not contain '%GENE', so will not be written.") augur-24.2.2/augur/tree.py000066400000000000000000000504711456376326500154100ustar00rootroot00000000000000""" Build a tree using a variety of methods. """ import os import shlex import shutil import sys import time import uuid import Bio from Bio.Seq import MutableSeq from Bio import Phylo import numpy as np from treetime.vcf_utils import read_vcf from pathlib import Path from .errors import AugurError from .io.file import open_file from .io.sequences import read_sequences from .io.shell_command_runner import run_shell_command from .io.vcf import shquote from .utils import nthreads_value, load_mask_sites DEFAULT_ARGS = { "fasttree": "-nt -nosupport", "raxml": "-f d -m GTRCAT -c 25 -p 235813", # For compat with older versions of iqtree, we avoid the newish -fast # option alias and instead spell out its component parts: # # -ninit 2 # -n 2 # -me 0.05 # # This may need to be updated in the future if we want to stay in lock-step # with -fast, although there's probably no particular reason we have to. # Refer to the handling of -fast in utils/tools.cpp: # https://github.com/Cibiv/IQ-TREE/blob/44753aba/utils/tools.cpp#L2926-L2936 # Increasing threads (nt) can cause IQtree to run longer, hence use AUTO by default # Auto makes IQtree chose the optimal number of threads # Redo prevents IQtree errors when a run was aborted and restarted "iqtree": "-ninit 2 -n 2 -me 0.05 -nt AUTO -redo", } # IQ-TREE only; see usage below DEFAULT_SUBSTITUTION_MODEL = "GTR" class ConflictingArgumentsException(Exception): """Exception when user-provided tree builder arguments conflict with the requested tree builder's hardcoded defaults (e.g., the path to the alignment, etc.). """ pass def check_conflicting_args(tree_builder_args, defaults): """Checks the given user-provided tree builder arguments for hardcoded default arguments and raise an exception with a list of any that are found. Arguments --------- tree_builder_args : str User-provided tree builder arguments defaults : list or tuple List of hardcoded default arguments (e.g., ['-nt']) Raises ------ ConflictingArgumentsException When any user-provided arguments match those in the defaults. Examples -------- >>> defaults = ("-ntmax", "-m", "-s") >>> check_conflicting_args("-czb -n 2", defaults) >>> check_conflicting_args("-czb -ntmax 2", defaults) Traceback (most recent call last): ... augur.tree.ConflictingArgumentsException: The following tree builder arguments conflict with hardcoded defaults. Remove these arguments and try again: -ntmax """ # Parse tree builder argument string into a list of shell arguments. This # allows us to search a list of arguments instead of a string where we might # find partial prefix matches to some of the given defaults. tree_builder_args_list = shlex.split(tree_builder_args) conflicting_args = [ default for default in defaults if default in tree_builder_args_list ] if len(conflicting_args) > 0: raise ConflictingArgumentsException( f"The following tree builder arguments conflict with hardcoded defaults. Remove these arguments and try again: {', '.join(conflicting_args)}" ) def find_executable(names, default = None): """ Return the path to the first executable found in PATH from the given list of names. Raises a (hopefully helpful) error if no executable is found. Provide a value for the "default" parameter to instead return a value. """ exe = next(filter(shutil.which, names), default) if exe is None: print("Unable to find any of %s in PATH=%s" % (names, os.environ["PATH"])) print("\nHint: You can install the missing program using conda or homebrew or apt-get.\n") raise Exception return exe def build_raxml(aln_file, out_file, clean_up=True, nthreads=1, tree_builder_args=None): ''' build tree using RAxML ''' raxml = find_executable([ # Users who symlink/install as "raxml" can pick a specific version, # otherwise we have our own search order based on expected parallelism. # The variants we look for are not exhaustive, but based on what's # provided by conda and Ubuntu's raxml packages. This may want to be # adjusted in the future depending on use. "raxml", "raxmlHPC-PTHREADS-AVX2", "raxmlHPC-PTHREADS-AVX", "raxmlHPC-PTHREADS-SSE3", "raxmlHPC-PTHREADS", "raxmlHPC-AVX2", "raxmlHPC-AVX", "raxmlHPC-SSE3", "raxmlHPC", ]) # RAxML outputs files appended with this random string: # RAxML_bestTree.4ed91a, RAxML_info.4ed91a, RAxML_parsimonyTree.4ed91a, RAxML_result.4ed91a random_string = uuid.uuid4().hex[0:6] # Check tree builder arguments for conflicts with hardcoded defaults. check_conflicting_args(tree_builder_args, ("-T", "-n", "-s")) call = [raxml,"-T",str(nthreads), "-n %s -s"%(random_string), shquote(aln_file), tree_builder_args, "> RAxML_log.%s"%(random_string)] cmd = " ".join(call) print("Building a tree via:\n\t" + cmd + "\n\tStamatakis, A: RAxML Version 8: A tool for Phylogenetic Analysis and Post-Analysis of Large Phylogenies." "\n\tIn Bioinformatics, 2014\n") try: run_shell_command(cmd, raise_errors = True) # When bootstrapping is enabled by custom tree_builder_args, RAxML # outputs the tree with support values to a different file, # "bipartitions". If it exists, then use it; otherwise use "bestTree". possible_tree_files = [ Path(f"RAxML_bipartitions.{random_string}"), # best-scoring ML tree with support values Path(f"RAxML_bestTree.{random_string}"), # best-scoring ML tree ] tree = next((t for t in possible_tree_files if t.exists()), None) if not tree: raise AugurError(f"No RAxML output tree files found; looked for: {', '.join(map(repr, map(str, possible_tree_files)))}") shutil.copy(str(tree), out_file) T = Phylo.read(out_file, 'newick') if clean_up: for f in Path().glob(f"RAxML_*.{random_string}"): f.unlink() except Exception as error: print("ERROR: TREE BUILDING FAILED") print(f"ERROR: {error}") if os.path.isfile("RAxML_log.%s"%(random_string)): print("Please see the log file for more details: {}".format("RAxML_log.%s"%(random_string))) T=None return T def build_fasttree(aln_file, out_file, clean_up=True, nthreads=1, tree_builder_args=None): ''' build tree using fasttree ''' log_file = out_file + ".log" fasttree = find_executable([ # Search order is based on expected parallelism and accuracy # (double-precision versions). "FastTreeDblMP", "FastTreeDbl", "FastTreeMP", "fasttreeMP", # Ubuntu lowercases "FastTree", "fasttree" ]) # By default FastTree with OpenMP support uses all available cores. # However, it respects the standard OpenMP environment variable controlling # this as described at . # # We always set it, regardless of it the found FastTree executable contains # "MP" in the name, because the generic "FastTree" or "fasttree" variants # might be OpenMP-enabled too. extra_env = { "OMP_NUM_THREADS": str(nthreads), } call = [fasttree, tree_builder_args, shquote(aln_file), "1>", shquote(out_file), "2>", shquote(log_file)] cmd = " ".join(call) print("Building a tree via:\n\t" + cmd + "\n\tPrice et al: FastTree 2 - Approximately Maximum-Likelihood Trees for Large Alignments." + "\n\tPLoS ONE 5(3): e9490. https://doi.org/10.1371/journal.pone.0009490\n") try: run_shell_command(cmd, raise_errors = True, extra_env = extra_env) T = Phylo.read(out_file, 'newick') except Exception as error: print("ERROR: TREE BUILDING FAILED") print(f"ERROR: {error}") if os.path.isfile(log_file): print("Please see the log file for more details: {}".format(log_file)) T=None return T def build_iqtree(aln_file, out_file, substitution_model="GTR", clean_up=True, nthreads=1, tree_builder_args=None): ''' build tree using IQ-Tree arguments: aln_file file name of input aligment out_file file name to write tree to ''' iqtree = find_executable([ "iqtree2", "iqtree" ]) # create a dictionary for characters that IQ-tree changes. # we remove those prior to tree-building and reinstantiate later def random_string(n): from string import ascii_uppercase as letters return "".join([letters[i] for i in np.random.randint(len(letters), size=n)]) prefix = "DELIM" escape_dict = {c:f'_{prefix}-{random_string(20)}_' for c in '/|()*'} reverse_escape_dict = {v:k for k,v in escape_dict.items()} # IQ-tree messes with taxon names. Hence remove offending characters, reinstaniate later tmp_aln_file = str(Path(aln_file).with_name(Path(aln_file).stem + "-delim.fasta")) log_file = str(Path(tmp_aln_file).with_suffix(".iqtree.log")) num_seqs = 0 with open_file(tmp_aln_file, 'w') as ofile, open_file(aln_file) as ifile: for line in ifile: tmp_line = line if line.startswith(">"): num_seqs += 1 for c,v in escape_dict.items(): tmp_line = tmp_line.replace(c,v) ofile.write(tmp_line) # Check tree builder arguments for conflicts with hardcoded defaults. check_conflicting_args(tree_builder_args, ("-ntmax", "-s", "-m")) if substitution_model.lower() != "auto": call = [iqtree, "-ntmax", str(nthreads), "-s", shquote(tmp_aln_file), "-m", shquote(substitution_model), tree_builder_args, ">", shquote(log_file)] else: call = [iqtree, "-ntmax", str(nthreads), "-s", shquote(tmp_aln_file), tree_builder_args, ">", shquote(log_file)] cmd = " ".join(call) print("Building a tree via:\n\t" + cmd + "\n\tNguyen et al: IQ-TREE: A fast and effective stochastic algorithm for estimating maximum likelihood phylogenies." "\n\tMol. Biol. Evol., 32:268-274. https://doi.org/10.1093/molbev/msu300\n") if substitution_model.lower() == "auto": print(f"Conducting a model test... see '{shquote(log_file)}' for the result. You can specify this with --substitution-model in future runs.") try: run_shell_command(cmd, raise_errors = True) T = Phylo.read(tmp_aln_file+".treefile", 'newick') shutil.copyfile(tmp_aln_file+".treefile", out_file) for n in T.find_clades(terminal=True): tmp_name = n.name for v,c in reverse_escape_dict.items(): tmp_name = tmp_name.replace(v,c) n.name = tmp_name #this allows the user to check intermediate output, as tree.nwk will be if clean_up: if os.path.isfile(tmp_aln_file): os.remove(tmp_aln_file) for ext in [".bionj",".ckp.gz",".iqtree",".mldist",".model.gz",".treefile",".uniqueseq.phy",".model"]: if os.path.isfile(tmp_aln_file + ext): os.remove(tmp_aln_file + ext) except Exception as error: print("ERROR: TREE BUILDING FAILED") print(f"ERROR: {error}") if os.path.isfile(log_file): print("Please see the log file for more details: {}".format(log_file)) T=None return T def write_out_informative_fasta(compress_seq, alignment, stripFile=None): from Bio import SeqIO from Bio.SeqRecord import SeqRecord from Bio.Seq import Seq sequences = compress_seq['sequences'] ref = compress_seq['reference'] positions = compress_seq['positions'] #If want to exclude sites from initial treebuild, read in here strip_pos = load_mask_sites(stripFile) if stripFile else [] #Get sequence names seqNames = list(sequences.keys()) #Check non-ref sites to see if informative printPositionMap = False #If true, prints file mapping Fasta position to real position sites = [] pos = [] for key in positions: if key not in strip_pos: pattern = [] for k in sequences.keys(): #looping try/except is faster than list comprehension try: pattern.append(sequences[k][key]) except KeyError: pattern.append(ref[key]) origPattern = list(pattern) if '-' in pattern or 'N' in pattern: #remove gaps/Ns to see if otherwise informative pattern = [value for value in origPattern if value != '-' and value != 'N'] un = np.unique(pattern, return_counts=True) #If not all - or N, not all same base, and >1 differing base, append if len(un[0])!=0 and len(un[0])!=1 and not (len(un[0])==2 and min(un[1])==1): sites.append(origPattern) pos.append("\t".join([str(len(pos)+1),str(key)])) #Rotate and convert to SeqRecord sites = np.asarray(sites) if len(sites.shape)!=2: print("ERROR: NO VALID SITES REMAIN AFTER IGNORING UNCALLED SITES") raise Exception align = np.rot90(sites) seqNamesCorr = list(reversed(seqNames)) toFasta = [ SeqRecord(id=seqNamesCorr[i], seq=Seq("".join(align[i])), description='') for i in range(len(sequences.keys()))] fasta_file = os.path.join(os.path.dirname(alignment), 'informative_sites.fasta') #now output this as fasta to read into raxml or iqtree SeqIO.write(toFasta, fasta_file, 'fasta') #If want a position map, print: if printPositionMap: with open_file(fasta_file+".positions.txt", 'w') as the_file: the_file.write("\n".join(pos)) return fasta_file def mask_sites_in_multiple_sequence_alignment(alignment_file, excluded_sites_file): """Creates a new multiple sequence alignment FASTA file from which the given excluded sites have been removed and returns the filename of the new alignment. Parameters ---------- alignment_file : str path to the original multiple sequence alignment file excluded_sites_file : str path to a text file containing each nucleotide position to exclude with one position per line Returns ------- str path to the new FASTA file from which sites have been excluded """ # Read 1-based excluded sites and store as 0-based sites. excluded_sites = load_mask_sites(excluded_sites_file) # Return the original alignment file, if no excluded sites were found. if len(excluded_sites) == 0: return alignment_file # Load alignment as FASTA generator to prevent loading the whole alignment # into memory. alignment = read_sequences(alignment_file) # Write the masked alignment to disk one record at a time. alignment_file_path = Path(alignment_file) masked_alignment_file = str(alignment_file_path.parent / ("masked_%s" % alignment_file_path.name)) with open_file(masked_alignment_file, "w") as oh: for record in alignment: # Convert to a mutable sequence to enable masking with Ns. sequence = MutableSeq(str(record.seq)) # Replace all excluded sites with Ns. for site in excluded_sites: sequence[site] = "N" record.seq = sequence Bio.SeqIO.write(record, oh, "fasta") # Return the new alignment FASTA filename. return masked_alignment_file def register_parser(parent_subparsers): parser = parent_subparsers.add_parser("tree", help=__doc__) parser.add_argument('--alignment', '-a', required=True, help="alignment in fasta or VCF format") parser.add_argument('--method', default='iqtree', choices=["fasttree", "raxml", "iqtree"], help="tree builder to use") parser.add_argument('--output', '-o', type=str, help='file name to write tree to') parser.add_argument('--substitution-model', default=DEFAULT_SUBSTITUTION_MODEL, help='substitution model to use. Specify \'auto\' to run ModelTest. Currently, only available for IQ-TREE.') parser.add_argument('--nthreads', type=nthreads_value, default=1, help="maximum number of threads to use; specifying the value 'auto' will cause the number of available CPU cores on your system, if determinable, to be used") parser.add_argument('--vcf-reference', type=str, help='fasta file of the sequence the VCF was mapped to') parser.add_argument('--exclude-sites', type=str, help='file name of one-based sites to exclude for raw tree building (BED format in .bed files, second column in tab-delimited files, or one position per line)') parser.add_argument('--tree-builder-args', type=str, help=f"""arguments to pass to the tree builder either augmenting or overriding the default arguments (except for input alignment path, number of threads, and substitution model). Use the assignment operator (e.g., --tree-builder-args="-czb" for IQ-TREE) to avoid unexpected errors. FastTree defaults: "{DEFAULT_ARGS['fasttree']}". RAxML defaults: "{DEFAULT_ARGS['raxml']}". IQ-TREE defaults: "{DEFAULT_ARGS['iqtree']}". """) parser.add_argument('--override-default-args', action="store_true", help="override default tree builder arguments with the values provided by the user in `--tree-builder-args` instead of augmenting the existing defaults.") parser.epilog = """For example, to build a tree with IQ-TREE, use the following format: augur tree --method iqtree --alignment --substitution-model --output --tree-builder-args="" """ return parser def run(args): # check alignment type, set flags, read in if VCF is_vcf = False ref = None if any([args.alignment.lower().endswith(x) for x in ['.vcf', '.vcf.gz']]): # Prepare a multiple sequence alignment from the given variants VCF and # reference FASTA. if not args.vcf_reference: print("ERROR: a reference Fasta is required with VCF-format alignments") return 1 compress_seq = read_vcf(args.alignment, args.vcf_reference) sequences = compress_seq['sequences'] ref = compress_seq['reference'] is_vcf = True aln = sequences elif args.exclude_sites: # Mask excluded sites from the given multiple sequence alignment. aln = mask_sites_in_multiple_sequence_alignment(args.alignment, args.exclude_sites) else: # Use the multiple sequence alignment as is. aln = args.alignment start = time.time() if args.output: tree_fname = args.output else: tree_fname = '.'.join(args.alignment.split('.')[:-1]) + '.nwk' # construct reduced alignment if needed if is_vcf: variable_fasta = write_out_informative_fasta(compress_seq, args.alignment, stripFile=args.exclude_sites) fasta = variable_fasta else: fasta = aln if args.method != "iqtree" and args.substitution_model is not DEFAULT_SUBSTITUTION_MODEL: print(f"Cannot specify --substitution-model unless using IQ-TREE. Model specification {args.substitution_model!r} ignored.", file=sys.stderr) # Allow users to keep default args, override them, or augment them. if args.tree_builder_args is None: tree_builder_args = DEFAULT_ARGS[args.method] elif args.override_default_args: tree_builder_args = args.tree_builder_args else: tree_builder_args = f"{DEFAULT_ARGS[args.method]} {args.tree_builder_args}" try: if args.method=='raxml': T = build_raxml(fasta, tree_fname, nthreads=args.nthreads, tree_builder_args=tree_builder_args) elif args.method=='iqtree': T = build_iqtree(fasta, tree_fname, args.substitution_model, nthreads=args.nthreads, tree_builder_args=tree_builder_args) elif args.method=='fasttree': T = build_fasttree(fasta, tree_fname, nthreads=args.nthreads, tree_builder_args=tree_builder_args) except ConflictingArgumentsException as error: print(f"ERROR:", error, file=sys.stderr) return 1 end = time.time() print("\nBuilding original tree took {} seconds".format(str(end-start))) if T: tree_success = Phylo.write(T, tree_fname, 'newick', format_branch_length='%1.8f') else: return 1 augur-24.2.2/augur/types.py000066400000000000000000000040061456376326500156060ustar00rootroot00000000000000from argparse import ArgumentTypeError import enum class ArgparseEnum(enum.Enum): """ Intended to be used as a parent class for any enum representation of string values to be used with argparse options. Can be replaced by :py:class:`enum.StrEnum` once Augur's minimum supported Python version is 3.11. """ def __str__(self) -> str: """ Stringify to the enum member's :py:attr:`.value` instead of the default. This let us use the enum's constructor and members with argparse's ``type`` and ``choices`` parameters, respectively, without exposing the enum class name to users. """ return self.value @classmethod def argtype(cls, input_string): """ Intended to be used as the argument type converter for argparse options that use the enum values as inputs. Raises a custom `argparse.ArgumentTypeError` so that the error message can include a helpful list of the all valid enum values. """ try: return cls(input_string) except ValueError as error: choices = ", ".join(f"{str(x)!r}" for x in cls) raise ArgumentTypeError( f"invalid choice: {input_string!r} (choose from {choices})") from error @enum.unique class DataErrorMethod(ArgparseEnum): """ Enum representation of string values that represent how a data error should be handled. """ ERROR_FIRST = 'error_first' ERROR_ALL = 'error_all' WARN = 'warn' SILENT = 'silent' @enum.unique class EmptyOutputReportingMethod(ArgparseEnum): """ Enum representation of string values that represent how empty outputs should be reported. """ ERROR = 'error' WARN = 'warn' SILENT = 'silent' @enum.unique class ValidationMode(ArgparseEnum): """ Enum representation of string values that represent how validation should be handled. """ ERROR = 'error' WARN = 'warn' SKIP = 'skip' augur-24.2.2/augur/util_support/000077500000000000000000000000001456376326500166415ustar00rootroot00000000000000augur-24.2.2/augur/util_support/__init__.py000066400000000000000000000000001456376326500207400ustar00rootroot00000000000000augur-24.2.2/augur/util_support/color_parser.py000066400000000000000000000021211456376326500217010ustar00rootroot00000000000000from collections import defaultdict import functools from augur.data import as_file from augur.io.file import open_file from augur.util_support.color_parser_line import ColorParserLine class ColorParser: def __init__(self, *, mapping_filename, use_defaults=True): self.mapping_filename = mapping_filename self.use_defaults = use_defaults @property @functools.lru_cache() def mapping(self): colors = {} if self.use_defaults: with as_file("colors.tsv") as file: with open_file(file) as defaults: colors = {**colors, **self.parse_file(defaults)} if self.mapping_filename: with open_file(self.mapping_filename) as mapping: colors = {**colors, **self.parse_file(mapping)} return colors def parse_file(self, file): file_mapping = defaultdict(list) for pair in [ColorParserLine(line).pair() for line in file]: if pair is None: continue file_mapping[pair[0]].append(pair[1]) return file_mapping augur-24.2.2/augur/util_support/color_parser_line.py000066400000000000000000000020661456376326500227200ustar00rootroot00000000000000import functools import re class ColorParserLine: def __init__(self, line): self.line = line def pair(self): if self.is_comment_or_blank(): return None if len(self.fields) != 3: print("WARNING: Color map file contains invalid line:", self.line) return None if not self.hex_code.startswith("#") or len(self.hex_code) != 7: print( "WARNING: Color map file contained this invalid hex code: ", self.hex_code, ) return None return self.trait, (self.trait_value, self.hex_code) def is_comment_or_blank(self): return bool(self.line.startswith("#") or re.match(r"^\s*$", self.line)) @property @functools.lru_cache() def fields(self): return self.line.strip().split("\t") @property def trait(self): return self.fields[0].lower() @property def trait_value(self): return self.fields[1].lower() @property def hex_code(self): return self.fields[2] augur-24.2.2/augur/util_support/node_data.py000066400000000000000000000027661456376326500211440ustar00rootroot00000000000000class DuplicatedNonDictAttributeError(Exception): def __init__(self, key): self.key = key class NodeData: """Data structure representing a set of Augur nodes""" def __init__(self): self.attrs = {} def update(self, new_attrs): for k, v in new_attrs.items(): self.deep_add_or_update(self.attrs, k, v) def deep_add_or_update(self, d, key, value): """ Recursively merge in new attributes using the following rules: if key is new: add it if key is old, but the old value is not a dict: if new value is also not a dict: overwrite it if trying to overwrite a non-dict with a dict: raise exception if key old and the old value is a dict: if new value is also a dict: recursively merge if trying to overwrite a dict with a non-dict: raise exception """ # TODO Python 3.9: Use the new dictionary union operator (https://www.python.org/dev/peps/pep-0584/) if key not in d or ( not isinstance(d[key], dict) and not isinstance(value, dict) ): d[key] = value return if not isinstance(d[key], dict) or not isinstance(value, dict): raise DuplicatedNonDictAttributeError(key) for sub_k, sub_v in value.items(): self.deep_add_or_update(d[key], sub_k, sub_v) augur-24.2.2/augur/util_support/node_data_file.py000066400000000000000000000073051456376326500221350ustar00rootroot00000000000000import json from augur.__version__ import __version__ from augur.__version__ import is_augur_version_compatible from augur.errors import AugurError from augur.io.file import open_file from augur.io.print import print_err from augur.types import ValidationMode from augur.validate import validate_json, ValidateError, load_json_schema FILTERED_ATTRS = ["generated_by"] class NodeDataFile: def __init__(self, fname, validation_mode=ValidationMode.ERROR): self.fname = fname self.validation_mode = validation_mode with open_file(fname) as jfile: self.attrs = json.load(jfile) self.validate() @property def annotations(self): return self.attrs.get("annotations") @property def nodes(self): return self.attrs.get("nodes", {}) @property def branches(self): # these are optional, so we provide an empty dict as a default return self.attrs.get("branches", {}) @property def generated_by(self): return self.attrs.get("generated_by") @property def is_generated_by_incompatible_augur(self): if not isinstance(self.generated_by, dict): # If it's not a dict created by augur, we can't reliably classify it as incompatible return False generated_by_augur = self.generated_by.get("program") == "augur" compatible_version = is_augur_version_compatible( self.generated_by.get("version") ) return generated_by_augur and not compatible_version def items(self): filtered_attrs = { key: value for key, value in self.attrs.items() if key not in FILTERED_ATTRS } return filtered_attrs.items() def validate(self): if self.annotations: try: validate_json( self.annotations, load_json_schema("schema-annotations.json"), self.fname, ) except ValidateError as err: raise AugurError( f"{self.fname} contains an `annotations` attribute of an invalid JSON format. Was it " "produced by different version of augur the one you are currently using " f" ({__version__})? Please check the program that produced that JSON file." ) from err if not isinstance(self.nodes, dict): raise AugurError( f"`nodes` value in {self.fname} is not a dictionary. Please check the formatting of this JSON!" ) if not isinstance(self.branches, dict): raise AugurError( f"`branches` value in {self.fname} is not a dictionary. Please check the formatting of this JSON!" ) if not self.nodes and not self.branches: print_err( f"WARNING: {self.fname} has empty or nonexistent `nodes` and `branches`. Please check the formatting of this JSON!" ) if self.validation_mode is not ValidationMode.SKIP and self.is_generated_by_incompatible_augur: msg = ( f"Augur version incompatibility detected: the JSON {self.fname} was generated by " f"{self.generated_by}, which is incompatible with the current augur version " f"({__version__}). We suggest you rerun the pipeline using the current version of " "augur." ) if self.validation_mode is ValidationMode.ERROR: raise AugurError(msg) elif self.validation_mode is ValidationMode.WARN: print_err(f"WARNING: {msg}") else: raise ValueError(f"unknown validation mode: {self.validation_mode!r}") augur-24.2.2/augur/util_support/node_data_reader.py000066400000000000000000000052561456376326500224630ustar00rootroot00000000000000import Bio.Phylo import sys from augur.types import ValidationMode from augur.util_support.node_data import DuplicatedNonDictAttributeError from augur.util_support.node_data import NodeData from augur.util_support.node_data_file import NodeDataFile class NodeDataReader: """ Parses one or more node data files and combines them into a single data structure. The format of Node data files is described in `docs/usage/json_format.md`. The `generated_by` attribute is not included in the resulting data structure. If a tree file is specified, it is used to verify the node names. If validation_mode is set to :py:attr:`augur.types.ValidationMode.SKIP`, Augur version of node data files is not checked. """ def __init__(self, filenames, tree_file=None, validation_mode=ValidationMode.ERROR): if not isinstance(filenames, list): filenames = [filenames] self.filenames = filenames self.tree_file = tree_file self.validation_mode = validation_mode def read(self): node_data = self.build_node_data() self.check_against_tree_file(node_data) return node_data def build_node_data(self): node_data = NodeData() for node_data_file in self.node_data_files: try: node_data.update(node_data_file) except DuplicatedNonDictAttributeError as e: print( f"Error parsing {node_data_file.fname}: Mixed dict and non-dict values found for " f"attribute `{e.key}`. Augur requires attributes of the same name to be uniformly dicts " "or non-dicts.", file=sys.stderr, ) sys.exit(2) return node_data.attrs @property def node_data_files(self): return (NodeDataFile(fname, validation_mode = self.validation_mode) for fname in self.filenames) def check_against_tree_file(self, node_data): if not self.tree_file: return if set(node_data["nodes"].keys()) != self.node_names_from_tree_file: print( f"Names of nodes (including internal nodes) of tree {self.tree_file} don't match node names " "in the node data files.", file=sys.stderr, ) sys.exit(2) @property def node_names_from_tree_file(self): try: tree = Bio.Phylo.read(self.tree_file, "newick") except Exception as e: print( f"Failed to read tree from file {self.tree_file}: {e}", file=sys.stderr ) sys.exit(2) return set([clade.name for clade in tree.find_clades()]) augur-24.2.2/augur/utils.py000066400000000000000000000701151456376326500156060ustar00rootroot00000000000000import argparse import Bio import Bio.Phylo import numpy as np import os, json, sys import pandas as pd from collections import defaultdict, OrderedDict from io import RawIOBase from textwrap import dedent from .__version__ import __version__ from augur.data import as_file from augur.io.file import PANDAS_READ_CSV_OPTIONS, open_file from augur.io.print import print_err from augur.types import ValidationMode from augur.errors import AugurError from augur.util_support.color_parser import ColorParser from augur.util_support.node_data_reader import NodeDataReader def get_json_name(args, default=None): if args.output_node_data: return args.output_node_data else: if default: print("WARNING: no name for the output file was specified. Writing results to %s."%default, file=sys.stderr) return default else: raise ValueError("Please specify a name for the JSON file containing the results.") class InvalidTreeError(Exception): """Represents an error loading a phylogenetic tree from a filename. """ pass def read_tree(fname, min_terminals=3): """Safely load a tree from a given filename or raise an error if the file does not contain a valid tree. Parameters ---------- fname : str name of a file containing a phylogenetic tree min_terminals : int minimum number of terminals required for the parsed tree as a sanity check on the tree Raises ------ InvalidTreeError If the given file exists but does not seem to contain a valid tree format. Returns ------- Bio.Phylo.BaseTree.Tree : BioPython tree instance """ T = None supported_tree_formats = ["newick", "nexus"] for fmt in supported_tree_formats: try: T = Bio.Phylo.read(fname, fmt) # Check the sanity of the parsed tree to handle cases when non-tree # data are still successfully parsed by BioPython. Too few terminals # in a tree indicates that the input is not valid. if T.count_terminals() < min_terminals: T = None else: break except ValueError: # We cannot open the tree in the current format, so we will try # another. pass # If the tree cannot be loaded, raise an error to that effect. if T is None: raise InvalidTreeError( "Could not read the given tree %s using the following supported formats: %s" % (fname, ", ".join(supported_tree_formats)) ) return T def read_node_data(fnames, tree=None, validation_mode=ValidationMode.ERROR): return NodeDataReader(fnames, tree, validation_mode).read() def write_json(data, file, indent=(None if os.environ.get("AUGUR_MINIFY_JSON") else 2), include_version=True): """ Write ``data`` as JSON to the given ``file``, creating parent directories if necessary. The augur version is included as a top-level key "augur_version". Parameters ---------- data : dict data to write out to JSON file file path or handle to write to indent : int or None, optional JSON indentation level. Default is `None` if the environment variable `AUGUR_MINIFY_JSON` is truthy, else 1 include_version : bool, optional Include the augur version. Default: `True`. Raises ------ OSError """ if isinstance(file, (str, os.PathLike)): #in case parent folder does not exist yet parent_directory = os.path.dirname(file) if parent_directory and not os.path.exists(parent_directory): try: os.makedirs(parent_directory) except OSError: #Guard against race condition if not os.path.isdir(parent_directory): raise if include_version: data["generated_by"] = {"program": "augur", "version": get_augur_version()} with open_file(file, 'w', encoding='utf-8') as handle: sort_keys = False if isinstance(data, OrderedDict) else True json.dump(data, handle, indent=indent, sort_keys=sort_keys, cls=AugurJSONEncoder) class BytesWrittenCounterIO(RawIOBase): """Binary stream to count the number of bytes sent via write().""" def __init__(self): self.written = 0 """Number of bytes written.""" def write(self, b): n = len(b) self.written += n return n def json_size(data): """Return size in bytes of a Python object in JSON string form.""" with BytesWrittenCounterIO() as counter: write_json(data, counter, include_version=False) return counter.written class AugurJSONEncoder(json.JSONEncoder): """ A custom JSONEncoder subclass to serialize data types used for various data stored in dictionary format. """ def default(self, obj): if isinstance(obj, np.integer): return int(obj) if isinstance(obj, np.floating): return float(obj) if isinstance(obj, np.ndarray): return obj.tolist() if isinstance(obj, pd.Series): return obj.tolist() return super().default(obj) def load_features(reference, feature_names=None): """ Parse a GFF/GenBank reference file. See the docstrings for _read_gff and _read_genbank for details. Parameters ---------- reference : str File path to GFF or GenBank (.gb) reference feature_names : None or set or list (optional) Restrict the genes we read to those in the set/list Returns ------- features : dict keys: feature names, values: Note that feature names may not equivalent to GenBank feature keys Raises ------ AugurError If the reference file doesn't exist, or is malformed / empty """ #checks explicitly for GFF otherwise assumes Genbank if not os.path.isfile(reference): raise AugurError(f"reference sequence file {reference!r} not found") if '.gff' in reference.lower(): return _read_gff(reference, feature_names) else: return _read_genbank(reference, feature_names) def _read_nuc_annotation_from_gff(record, reference): """ Looks for the ##sequence-region pragma as well as 'region' & 'source' GFF types. Note that 'source' isn't really a GFF feature type, but is used widely in the Nextstrain ecosystem. If there are multiple we check that the coordinates agree. Parameters ---------- record : reference: string File path to GFF reference Returns ------- Raises ------ AugurError If no information on the genome / seqid length is available or if the information is contradictory """ nuc = {} # Attempt to parse the sequence-region pragma to learn the genome # length (in the absence of record/source we'll use this for 'nuc') sequence_regions = record.annotations.get('sequence-region', []) if len(sequence_regions)>1: raise AugurError(f"Reference {reference!r} contains multiple ##sequence-region pragma lines. Augur can only handle GFF files with a single one.") elif sequence_regions: from Bio.SeqFeature import SeqFeature, FeatureLocation (name, start, stop) = sequence_regions[0] nuc['pragma'] = SeqFeature( FeatureLocation(start, stop, strand=1), type='##sequence-region pragma', id=name, ) for feat in record.features: if feat.type == "region": nuc['region'] = feat elif feat.type == "source": nuc['source'] = feat # ensure they all agree on coordinates, if there are multiple if len(nuc.values())>1: coords = [(name, int(feat.location.start), int(feat.location.end)) for name,feat in nuc.items()] if not all(el[1]==coords[0][1] and el[2]==coords[0][2] for el in coords): raise AugurError(f"Reference {reference!r} contained contradictory coordinates for the seqid/genome. We parsed the following coordinates: " + ', '.join([f"{el[0]}: [{el[1]+1}, {el[2]}]" for el in coords]) # +1 on the first coord to shift to one-based GFF representation ) if 'pragma' in nuc: ## the pragma is GFF's preferred way to define nuc coords return nuc['pragma'] elif 'region' in nuc: return nuc['region'] elif 'source' in nuc: return nuc['source'] else: raise AugurError(f"Reference {reference!r} didn't define any information we can use to create the 'nuc' annotation. You can use a line with a 'record' or 'source' GFF type or a ##sequence-region pragma.") def _read_gff(reference, feature_names): """ Read a GFF file. We only read GFF IDs 'gene' or 'source' (the latter may not technically be a valid GFF field, but is used widely within the Nextstrain ecosystem). Only the first entry in the GFF file is parsed. We create a "feature name" via: - for 'source' IDs use 'nuc' - for 'gene' IDs use the 'gene', 'gene_name' or 'locus_tag'. If none are specified, the intention is to silently ignore but there are bugs here. Parameters ---------- reference : string File path to GFF reference feature_names : None or set or list Restrict the genes we read to those in the set/list Returns ------- features : dict keys: feature names, values: Note that feature names may not equivalent to GenBank feature keys Raises ------ AugurError If the reference file contains no IDs or multiple different seqids If a gene is found with the name 'nuc' """ from BCBio import GFF valid_types = ['gene', 'source', 'region'] features = {} with open_file(reference) as in_handle: # Note that `GFF.parse` doesn't always yield GFF records in the order # one may expect, but since we raise AugurError if there are multiple # this doesn't matter. # TODO: Remove warning suppression after it's addressed upstream: # import warnings from Bio import BiopythonDeprecationWarning warnings.simplefilter("ignore", BiopythonDeprecationWarning) gff_entries = list(GFF.parse(in_handle, limit_info={'gff_type': valid_types})) warnings.simplefilter("default", BiopythonDeprecationWarning) if len(gff_entries) == 0: raise AugurError(f"Reference {reference!r} contains no valid data rows. Valid GFF types (3rd column) are {', '.join(valid_types)}.") elif len(gff_entries) > 1: raise AugurError(f"Reference {reference!r} contains multiple seqids (first column). Augur can only handle GFF files with a single seqid.") else: rec = gff_entries[0] features['nuc'] = _read_nuc_annotation_from_gff(rec, reference) features_skipped = 0 for feat in rec.features: if feat.type == "gene": # Check for gene names stored in qualifiers commonly used by # virus-specific gene maps first (e.g., 'gene', # 'gene_name'). Then, check for qualifiers used by non-viral # pathogens (e.g., 'locus_tag'). if "gene" in feat.qualifiers: fname = feat.qualifiers["gene"][0] elif "gene_name" in feat.qualifiers: fname = feat.qualifiers["gene_name"][0] elif "locus_tag" in feat.qualifiers: fname = feat.qualifiers["locus_tag"][0] else: features_skipped+=1 fname = None if fname == 'nuc': raise AugurError(f"Reference {reference!r} contains a gene with the name 'nuc'. This is not allowed.") if feature_names is not None and fname not in feature_names: # Skip (don't store) this feature continue if fname: features[fname] = feat if feature_names is not None: for fe in feature_names: if fe not in features: print("Couldn't find gene {} in GFF or GenBank file".format(fe)) if features_skipped: print(f"WARNING: {features_skipped} GFF rows of type=gene skipped as they didn't have a gene, gene_name or locus_tag attribute.") return features def _read_nuc_annotation_from_genbank(record, reference): """ Extracts the mandatory 'source' feature. If the sequence is present we check the length agrees with the source. (The 'ORIGIN' may be left blank, according to .) See for more. Parameters ---------- record : reference: string Returns ------- Raises ------ AugurError If 'source' not defined or if coords contradict. """ nuc = None for feat in record.features: if feat.type=='source': nuc = feat if not nuc: raise AugurError(f"Reference {reference!r} did not define the mandatory source feature.") if nuc.location.start!=0: # this is a '1' in the GenBank file raise AugurError(f"Reference {reference!r} source feature did not start at 1.") if record.seq and len(record.seq)!=nuc.location.end: raise AugurError(f"Reference {reference!r} source feature was length {nuc.location.end} but the included sequence was length {len(record.seq)}.") return nuc def _read_genbank(reference, feature_names): """ Read a GenBank file. We only read GenBank feature keys 'CDS' or 'source'. We create a "feature name" via: - for 'source' features use 'nuc' - for 'CDS' features use the locus_tag or the gene. If neither, then silently ignore. Parameters ---------- reference : string File path to GenBank reference feature_names : None or set or list Restrict the CDSs we read to those in the set/list Returns ------- features : dict keys: feature names, values: Note that feature names may not equivalent to GenBank feature keys Raises ------ AugurError If 'nuc' annotation not parsed If a CDS feature is given the name 'nuc' """ from Bio import SeqIO gb = SeqIO.read(reference, 'genbank') features = { 'nuc': _read_nuc_annotation_from_genbank(gb, reference) } features_skipped = 0 for feat in gb.features: if feat.type=='CDS': fname = None if "locus_tag" in feat.qualifiers: fname = feat.qualifiers["locus_tag"][0] elif "gene" in feat.qualifiers: fname = feat.qualifiers["gene"][0] else: features_skipped+=1 if fname == 'nuc': raise AugurError(f"Reference {reference!r} contains a CDS with the name 'nuc'. This is not allowed.") if fname and (feature_names is None or fname in feature_names): features[fname] = feat if features_skipped: print(f"WARNING: {features_skipped} CDS features skipped as they didn't have a locus_tag or gene qualifier.") return features def read_config(fname): if not (fname and os.path.isfile(fname)): print("ERROR: config file %s not found."%fname) return defaultdict(dict) try: with open_file(fname, 'rb') as ifile: config = json.load(ifile) except json.decoder.JSONDecodeError as err: print("FATAL ERROR:") print("\tCouldn't parse the JSON file {}".format(fname)) print("\tError message: '{}'".format(err.msg)) print("\tLine number: '{}'".format(err.lineno)) print("\tColumn number: '{}'".format(err.colno)) print("\tYou must correct this file in order to proceed.") sys.exit(2) return config def read_lat_longs(overrides=None, use_defaults=True): coordinates = {} # TODO: make parsing of tsv files more robust while allow for whitespace delimiting for backwards compatibility def add_line_to_coordinates(line): if line.startswith('#') or line.strip() == "": return fields = line.strip().split() if not '\t' in line else line.strip().split('\t') if len(fields) == 4: geo_field, loc = fields[0].lower(), fields[1].lower() lat, long = float(fields[2]), float(fields[3]) coordinates[(geo_field, loc)] = { "latitude": lat, "longitude": long } else: print("WARNING: geo-coordinate file contains invalid line. Please make sure not to mix tabs and spaces as delimiters (use only tabs):",line) if use_defaults: with as_file("lat_longs.tsv") as file: with open_file(file) as defaults: for line in defaults: add_line_to_coordinates(line) if overrides: if os.path.isfile(overrides): with open_file(overrides) as ifile: for line in ifile: add_line_to_coordinates(line) else: print("WARNING: input lat/long file %s not found." % overrides) return coordinates def read_colors(overrides=None, use_defaults=True): return ColorParser(mapping_filename=overrides, use_defaults=use_defaults).mapping def first_line(text): """ Returns the first line of the given text, ignoring leading and trailing whitespace. """ return text.strip().splitlines()[0] def available_cpu_cores(fallback: int = 1) -> int: """ Returns the number (an int) of CPU cores available to this **process**, if determinable, otherwise the number of CPU cores available to the **computer**, if determinable, otherwise the *fallback* number (which defaults to 1). """ try: # Note that this is the correct function to use, not os.cpu_count(), as # described in the latter's documentation. # # The reason, which the documentation does not detail, is that # processes may be pinned or restricted to certain CPUs by setting # their "affinity". This is not typical except in high-performance # computing environments, but if it is done, then a computer with say # 24 total cores may only allow our process to use 12. If we tried to # naively use all 24, we'd end up with two threads across the 12 cores. # This would degrade performance rather than improve it! assert hasattr(os, "sched_getaffinity") return len(os.sched_getaffinity(0)) except: # cpu_count() returns None if the value is indeterminable. return os.cpu_count() or fallback def nthreads_value(value): """ Argument value validation and casting function for --nthreads. """ if value.lower() == 'auto': return available_cpu_cores() try: return int(value) except ValueError: raise argparse.ArgumentTypeError("'%s' is not an integer or the word 'auto'" % value) from None def get_parent_name_by_child_name_for_tree(tree): ''' Return dictionary mapping child node names to parent node names ''' parents = {} for clade in tree.find_clades(order='level'): for child in clade: parents[child.name] = clade.name return parents def annotate_parents_for_tree(tree): """Annotate each node in the given tree with its parent. Examples -------- >>> import io >>> tree = Bio.Phylo.read(io.StringIO("(A, (B, C))"), "newick") >>> not any([hasattr(node, "parent") for node in tree.find_clades()]) True >>> tree = annotate_parents_for_tree(tree) >>> tree.root.parent is None True >>> all([hasattr(node, "parent") for node in tree.find_clades()]) True """ tree.root.parent = None for node in tree.find_clades(order="level"): for child in node.clades: child.parent = node # Return the tree. return tree def json_to_tree(json_dict, root=True, parent_cumulative_branch_length=None): """Returns a Bio.Phylo tree corresponding to the given JSON dictionary exported by `tree_to_json`. Assigns links back to parent nodes for the root of the tree. Examples -------- Test opening a JSON from augur export v1. >>> import json >>> json_fh = open("tests/data/json_tree_to_nexus/flu_h3n2_ha_3y_tree.json", "r") >>> json_dict = json.load(json_fh) >>> tree = json_to_tree(json_dict) >>> tree.name 'NODE_0002020' >>> len(tree.clades) 2 >>> tree.clades[0].name 'NODE_0001489' >>> hasattr(tree, "attr") True >>> "dTiter" in tree.attr True >>> tree.clades[0].parent.name 'NODE_0002020' >>> tree.clades[0].branch_length > 0 True Test opening a JSON from augur export v2. >>> json_fh = open("tests/data/zika.json", "r") >>> json_dict = json.load(json_fh) >>> tree = json_to_tree(json_dict) >>> hasattr(tree, "name") True >>> len(tree.clades) > 0 True >>> tree.clades[0].branch_length > 0 True Branch lengths should be the length of the branch to each node and not the length from the root. The cumulative branch length from the root gets its own attribute. >>> tip = [tip for tip in tree.find_clades(terminal=True) if tip.name == "USA/2016/FLWB042"][0] >>> round(tip.cumulative_branch_length, 6) 0.004747 >>> round(tip.branch_length, 6) 0.000186 """ # Check for v2 JSON which has combined metadata and tree data. if root and "meta" in json_dict and "tree" in json_dict: json_dict = json_dict["tree"] node = Bio.Phylo.Newick.Clade() # v1 and v2 JSONs use different keys for strain names. if "name" in json_dict: node.name = json_dict["name"] else: node.name = json_dict["strain"] # Assign all non-children attributes. for attr, value in json_dict.items(): if attr != "children": setattr(node, attr, value) # Only v1 JSONs support a single `attr` attribute. if hasattr(node, "attr"): node.numdate = node.attr.get("num_date") node.cumulative_branch_length = node.attr.get("div") if "translations" in node.attr: node.translations = node.attr["translations"] elif hasattr(node, "node_attrs"): node.cumulative_branch_length = node.node_attrs.get("div") node.branch_length = 0.0 if parent_cumulative_branch_length is not None and hasattr(node, "cumulative_branch_length"): node.branch_length = node.cumulative_branch_length - parent_cumulative_branch_length if "children" in json_dict: # Recursively add children to the current node. node.clades = [ json_to_tree( child, root=False, parent_cumulative_branch_length=node.cumulative_branch_length ) for child in json_dict["children"] ] if root: node = annotate_parents_for_tree(node) return node def get_augur_version(): """ Returns a string of the current augur version. """ return __version__ def read_bed_file(bed_file): """Read a BED file and return a list of excluded sites. Note: This function assumes the given file is a BED file. On parsing failures, it will attempt to skip the first line and retry, but no other error checking is attempted. Incorrectly formatted files will raise errors. Parameters ---------- bed_file : str Path to the BED file Returns ------- list of int: Sorted list of unique zero-indexed sites """ mask_sites = [] try: bed = pd.read_csv(bed_file, sep='\t', header=None, usecols=[1,2], dtype={1:int,2:int}, **PANDAS_READ_CSV_OPTIONS) except ValueError: # Check if we have a header row. Otherwise, just fail. bed = pd.read_csv(bed_file, sep='\t', header=None, usecols=[1,2], dtype={1:int,2:int}, skiprows=1, **PANDAS_READ_CSV_OPTIONS) print("Skipped row 1 of %s, assuming it is a header." % bed_file) for _, row in bed.iterrows(): mask_sites.extend(range(row[1], row[2])) return sorted(set(mask_sites)) def read_mask_file(mask_file): """Read a masking file and return a list of excluded sites. Masking files have a single masking site per line, either alone or as the second column of a tab-separated file. These sites are assumed to be one-indexed, NOT zero-indexed. Incorrectly formatted lines will be skipped. Parameters ---------- mask_file : str Path to the masking file Returns ------- list of int: Sorted list of unique zero-indexed sites """ mask_sites = [] with open_file(mask_file) as mf: for idx, line in enumerate(l.strip() for l in mf.readlines()): if "\t" in line: line = line.split("\t")[1] try: mask_sites.append(int(line) - 1) except ValueError as err: print("Could not read line %s of %s: '%s' - %s" % (idx, mask_file, line, err), file=sys.stderr) raise return sorted(set(mask_sites)) def load_mask_sites(mask_file): """Load masking sites from either a BED file or a masking file. Parameters ---------- mask_file: str Path to the BED or masking file Returns ------- list of int Sorted list of unique zero-indexed sites """ if mask_file.lower().endswith(".bed"): mask_sites = read_bed_file(mask_file) else: mask_sites = read_mask_file(mask_file) print("%d masking sites read from %s" % (len(mask_sites), mask_file)) return mask_sites VALID_NUCLEOTIDES = { # http://reverse-complement.com/ambiguity.html "A", "G", "C", "T", "U", "N", "R", "Y", "S", "W", "K", "M", "B", "V", "D", "H", "-", "a", "g", "c", "t", "u", "n", "r", "y", "s", "w", "k", "m", "b", "v", "d", "h", "-" } def read_strains(*files, comment_char="#"): print_err(dedent(""" DEPRECATION WARNING: augur.utils.read_strains is no longer maintained and will be removed in the future. Please use augur.io.read_strains instead.""")) return set(read_entries(*files, comment_char=comment_char)) def read_entries(*files, comment_char="#"): """Reads entries (one per line) from one or more plain text files. Entries can be commented with full-line or inline comments. For example, the following is a valid file:: # this is a comment at the top of the file strain1 # exclude strain1 because it isn't sequenced properly strain2 # this is an empty line that will be ignored. Parameters ---------- files : iterable of str one or more names of text files with one entry per line Returns ------- set : lines from the given input files """ entries = list() for input_file in files: with open_file(input_file, 'r') as ifile: for line in ifile: # Allow comments anywhere in a given line. entry = line.split(comment_char)[0].strip() if len(entry) > 0: entries.append(entry) return entries def parse_genes_argument(input): if input is None: return None # If input is a file, read in the genes to translate if len(input) == 1 and os.path.isfile(input[0]): return _get_genes_from_file(input[0]) # Otherwise, the input itself is assumed to be a list of genes return input def _get_genes_from_file(fname): if os.path.isfile(fname): genes = read_entries(fname) else: print("File with genes not found. Looking for", fname) genes = [] unique_genes = np.unique(np.array(genes)) if len(unique_genes) != len(genes): print("You have duplicates in your genes file. They are being ignored.") print("Read in {} specified genes to translate.".format(len(unique_genes))) return unique_genes augur-24.2.2/augur/validate.py000066400000000000000000000432541456376326500162430ustar00rootroot00000000000000""" Validate files related to augur consumption or export. """ import sys from collections import defaultdict import json import jsonschema import jsonschema.exceptions import re from itertools import groupby from textwrap import indent from typing import Iterable, Union from augur.data import as_file from augur.io.file import open_file from augur.io.print import print_err from augur.io.json import shorten_as_json from .validate_export import verifyMainJSONIsInternallyConsistent, verifyMetaAndOrTreeJSONsAreInternallyConsistent def fatal(message): print("FATAL ERROR: {}".format(message)) sys.exit(2) class ValidateError(Exception): pass def load_json_schema(path, refs=None): ''' Load a JSON schema from the augur included set of schemas (located in augur/data) ''' try: with as_file(path) as file, open_file(file, "r") as fh: schema = json.load(fh) except json.JSONDecodeError as err: raise ValidateError("Schema {} is not a valid JSON file. Error: {}".format(path, err)) # check loaded schema is itself valid -- see http://python-jsonschema.readthedocs.io/en/latest/errors/ Validator = jsonschema.validators.validator_for(schema) try: Validator.check_schema(schema) except jsonschema.exceptions.SchemaError as err: raise ValidateError(f"Schema {path} is not a valid JSON Schema ({Validator.META_SCHEMA['$schema']}). Error: {err}") if refs: # Make the validator aware of additional schemas schema_store = dict() for k, v in refs.items(): with as_file(v) as file, open_file(file, "r") as fh: schema_store[k] = json.load(fh) resolver = jsonschema.RefResolver.from_schema(schema,store=schema_store) schema_validator = Validator(schema, resolver=resolver) else: schema_validator = Validator(schema) # By default $ref URLs which we don't define in a schema_store are fetched # by jsonschema. This often indicates a typo (the $ref doesn't match the key # of the schema_store) or we forgot to add a local mapping for a new $ref. # Either way, Augur should not be accessing the network. def resolve_remote(url): # The exception type is not important as jsonschema will catch & re-raise as a RefResolutionError raise Exception(f"The schema used for validation attempted to fetch the remote URL {url!r}. " + "Augur should resolve schema references to local files, please check the schema used " + "and update the appropriate schema_store as needed." ) schema_validator.resolver.resolve_remote = resolve_remote return schema_validator def load_json(path): with open_file(path, 'rb') as fh: try: jsonToValidate = json.load(fh) except json.JSONDecodeError: raise ValidateError("Supplied JSON to validate ({}) is not a valid JSON".format(path)) return jsonToValidate def validate_json(jsonToValidate, schema, filename): # See and # for the # jsonschema APIs we use here. print("Validating schema of {!r}...".format(filename)) # Find all errors. This is what schema.validate() uses internally, before # raising just one "best" error. We want to report ~everything at once, so # the user isn't stuck playing whack-a-mole. errors = list(schema.iter_errors(jsonToValidate)) def print_errors(errors, level=1): prefix = " " for error in sorted(errors, key=jsonschema.exceptions.relevance): path = elide_path(error.absolute_path) value = shorten_as_json(error.instance, 50, "…") validator = error.validator validator_value = shorten_as_json(error.validator_value, 100, "…") print_err(indent(f"{path} {value} failed {validator} validation for {validator_value}", prefix*level)) # Report sub-errors, as they're often closer to what needs fixing. # # We special case the oneOf and anyOf validators to partition # errors by the validation arm, so it's clear why every arm of the # oneOf/anyOf validator failed. This is particularly useful for # our top-level "tree" property, which uses oneOf. # # In theory this special handling could also apply to allOf, not, # if/then/else, items, etc. validators which take subschemas, but # jsonschema 3.2.0 doesn't include context for those. We currently # only use oneOf any how. # -trs, 23 Jan 2023 if error.context: if error.validator in {"oneOf", "anyOf"}: validator_value_idx = lambda e: e.schema_path[0] for idx, ctx in grouped(error.context, key=validator_value_idx): validator_subvalue = shorten_as_json(error.validator_value[idx], 100, "…") print_err(indent(f"validation for arm {idx}: {validator_subvalue}", prefix*(level+1))) print_errors(ctx, level+2) else: print_errors(error.context, level+1) print_errors(errors) if errors: raise ValidateError("Validation of {!r} failed.".format(filename)) def elide_path(path: Iterable[Union[str, int]]) -> str: """ Elide recursive ``.children[N]`` selectors from *path* after formatting with :py:func:`format_path`. Our tree JSONs are highly nested and the exact path to a node in the tree is often more noisy than useful in error messages. >>> format_path(("tree", "children", 1, "children", 0, "children", 1, "children", 0, "node_attrs", "x")) '.tree.children[1].children[0].children[1].children[0].node_attrs.x' >>> elide_path(("tree", "children", 1, "children", 0, "children", 1, "children", 0, "node_attrs", "x")) '.tree.children[…].node_attrs.x' Elision is only used with more than a single level of ``.children[N]``. >>> elide_path(("tree", "children", 1, "node_attrs", "x")) '.tree.children[1].node_attrs.x' """ return re.sub(r'([.]children\[[0-9]+\]){2,}', r'.children[…]', format_path(path)) def format_path(path: Iterable[Union[str, int]]) -> str: """ Format an iterable of *path* segments, which index into a JSON document, into a more human-readable string. Intended for folks who aren't necessarily programmers, so this doesn't try to construct a valid JS property accessor chain or valid JSON Path selector. >>> format_path(("a", "b", "c")) '.a.b.c' >>> format_path(("l", "m-n-o", "p")) ".l.'m-n-o'.p" >>> format_path(("x", "y", 42, "z")) '.x.y[42].z' """ def valid_identifier(x) -> bool: return isinstance(x, str) and re.search(r'^[a-zA-Z$_][a-zA-Z0-9_$]*$', x) is not None def fmt(x) -> str: return (f"[{x}]" if isinstance(x, int) else f".{x}" if valid_identifier(x) else f".{x!r}") return "".join(map(fmt, path)) def grouped(iterable, key): """ Version of :py:func:`itertools.groupby` which doesn't require the caller to remember to sort first. """ return groupby(sorted(iterable, key=key), key=key) validate = validate_json # TODO update uses and drop this alias def auspice_config_v2(config_json, **kwargs): schema = load_json_schema("schema-auspice-config-v2.json") config = load_json(config_json) validate(config, schema, config_json) def export_v2(main_json, **kwargs): # The main_schema uses references to other schemas, and the suggested use is # to define these refs as valid URLs. Augur itself should not access schemas # over the wire so we provide a mapping between URLs and filepaths here. The # filepath is specified relative to ./augur/data (where all the schemas # live). refs = { 'https://nextstrain.org/schemas/augur/annotations': "schema-annotations.json", 'https://nextstrain.org/schemas/dataset/root-sequence': "schema-export-root-sequence.json", 'https://nextstrain.org/schemas/auspice/config/v2': "schema-auspice-config-v2.json", } main_schema = load_json_schema("schema-export-v2.json", refs) if main_json.endswith("frequencies.json") or main_json.endswith("entropy.json") or main_json.endswith("sequences.json"): raise ValidateError("This validation subfunction is for the main `augur export v2` JSON only.") main = load_json(main_json) validate(main, main_schema, main_json) if verifyMainJSONIsInternallyConsistent(main, ValidateError): print("Validation of {!r} succeeded.".format(main_json)) else: print("Validation of {!r} succeeded, but there were warnings you may want to resolve.".format(main_json)) def export_v1(meta_json, tree_json, **kwargs): meta_schema = load_json_schema("schema-export-v1-meta.json") tree_schema = load_json_schema("schema-export-v1-tree.json") if not meta_json.endswith("_meta.json"): raise ValidateError("The metadata JSON pathname {} must end with '_meta.json'.".format(meta_json)) if not tree_json.endswith("_tree.json"): raise ValidateError("The metadata JSON pathname {} must end with '_tree.json'.".format(tree_json)) meta = load_json(meta_json) tree = load_json(tree_json) validate(meta, meta_schema, meta_json) validate(tree, tree_schema, tree_json) if verifyMetaAndOrTreeJSONsAreInternallyConsistent(meta, tree, ValidateError): print("Validation of {!r} and {!r} succeeded.".format(meta_json, tree_json)) else: print("Validation of {!r} and {!r} succeeded, but there were warnings you may want to resolve.".format(meta_json, tree_json)) def get_unique_keys(list_of_dicts): """ Returns a set of unique keys from a list of dicts Examples -------- >>> list_of_dicts = [{"key1": "val1", "key2": "val2"}, {"key1": "val1", "key3": "val3"}] >>> sorted(get_unique_keys(list_of_dicts)) ['key1', 'key2', 'key3'] """ return set().union(*(single_dict.keys() for single_dict in list_of_dicts)) def validate_collection_config_fields(collection, index=None): """ Validates a single collection's config field keys provided in fields, groupings, and filters are valid fields that exist in measurements' fields. Prints any validation errors to stderr. Parameters ---------- collection: dict A single collection to validate. Assumes that the collection has already passed the schema validation. index: int, optional the index of the collection within a list of collections in a measurements JSON. Used to print more detailed error messages. Returns ------- bool True if collection's config is valid """ valid_collection_config_fields = True nested_config_fields = ['fields', 'groupings'] flat_config_fields = ['filters'] # Create set of all measurements' fields for verifying field configs all_measurement_fields = get_unique_keys(collection['measurements']) for config_field in (nested_config_fields + flat_config_fields): invalid_fields = set() for config_value in collection.get(config_field, []): # config value can be a field name string (i.e. flat_config_fields) # or a dict with the field name in 'key' (i.e. nested_config_fields) field_name = config_value['key'] if config_field in nested_config_fields else config_value if field_name not in all_measurement_fields: invalid_fields.add(field_name) if invalid_fields: valid_collection_config_fields = False include_index = f"(at index {index}) " if index is not None else "" print( f"ERROR: Collection {include_index}includes {config_field} that", f"do not exist as fields in measurements: {invalid_fields}.", file=sys.stderr ) return valid_collection_config_fields def validate_collection_display_defaults(collection, index=None): """ Validates a single collection's display defaults. If a default group-by field is provided, the field must be included in groupings. Prints validation errors to stderr. Parameters ---------- collection: dict A single collection to validate. Assumest htat the collection has already passed the schema validation. index: int, optional The index of the collection within a list of collections in a measurements JSON. Used to print more detailed error messages. Returns ------- bool True if collection's display defaults are valid """ valid_display_defaults = True grouping_fields = {grouping['key'] for grouping in collection['groupings']} default_grouping = collection.get('display_defaults', {}).get('group_by') if default_grouping and default_grouping not in grouping_fields: valid_display_defaults = False include_index = f"(at index {index}) " if index is not None else "" print( f"ERROR: Collection {include_index}has a default group-by field", f"'{default_grouping}' that is not included in the groupings' fields.", file=sys.stderr ) return valid_display_defaults def validate_measurements_config(measurements): """ Validate measurements' config values meet expectations described in the measurements JSON schema descriptions that cannot be verified via `validate_json`: 1. Individual collections have valid config values 2. All collections have unique keys 3. If a default collection is provided, it matches one of the collections Prints any validation errors to stderr. Parameters ---------- measurements: dict Loaded measurements JSON to validate. Assumes the measurements JSON has already passed the schema validation. Returns ------- bool True if measurements' config is valid """ valid_measurements_config = True collection_keys = defaultdict(list) # First check configs for individual collections for index, collection in enumerate(measurements['collections']): # Save the collection key and index of collection to verify unique keys later collection_keys[collection['key']].append(index) if not all([ validate_collection_config_fields(collection, index), validate_collection_display_defaults(collection, index) ]): valid_measurements_config = False # Check collections have unique keys for collection_key, collection_indexes in collection_keys.items(): if len(collection_indexes) > 1: valid_measurements_config = False print( f"ERROR: Collections at indexes {collection_indexes} share the same collection key '{collection_key}'.", file=sys.stderr ) # Check the default collection value matches a collection's key value default_collection = measurements.get('default_collection') if default_collection and default_collection not in collection_keys.keys(): valid_measurements_config = False print( f"ERROR: The default collection key {default_collection!r} does not match any of the collections' keys.", file=sys.stderr ) return valid_measurements_config def measurements(measurements_json, **kwargs): schema = load_json_schema("schema-measurements.json") measurements = load_json(measurements_json) validate_json(measurements, schema, measurements_json) if not validate_measurements_config(measurements): raise ValidateError("Validation of the measurements' config values failed.") return measurements def measurements_collection_config(collection_config_json, **kwargs): schema = load_json_schema("schema-measurements-collection-config.json") collection_config = load_json(collection_config_json) validate_json(collection_config, schema, collection_config_json) if not validate_collection_display_defaults(collection_config): raise ValidateError("Validation of the collection config display defaults failed.") return collection_config def register_parser(parent_subparsers): # Not using utils.first_line for help here because it results in a circular import parser = parent_subparsers.add_parser("validate", help=__doc__) subparsers = parser.add_subparsers(dest="subcommand", help="Which file(s) do you want to validate?") subparsers.add_parser("export-v2", help="validate JSON intended for auspice v2") \ .add_argument('main_json', metavar='JSON', help="exported (main) v2 auspice JSON") export_v1 = subparsers.add_parser("export-v1", help="validate tree+meta JSONs intended for auspice v1") export_v1.add_argument('meta_json', metavar='META-JSON', help="exported (v1) meta JSON") export_v1.add_argument('tree_json', metavar='TREE-JSON', help="exported (v1) tree JSON") subparsers.add_parser("auspice-config-v2", help="validate auspice config intended for `augur export v2`") \ .add_argument('config_json', metavar='JSON', help="auspice config JSON") subparsers.add_parser("measurements", help="validate measurements JSON intended for auspice measurements panel") \ .add_argument("measurements_json", metavar="JSON", help="exported measurements JSON") subparsers.add_parser("measurements-collection-config", help="validate measurement collection config intended for `augur measurements export`") \ .add_argument("collection_config_json", metavar="JSON", help="collection config JSON") return parser def run(args): try: globals()[args.subcommand.replace('-','_')](**vars(args)) except ValidateError as e: fatal(e) augur-24.2.2/augur/validate_export.py000066400000000000000000000317041456376326500176410ustar00rootroot00000000000000""" Functions that are from earlier versions of `augur validate` and haven't yet been moved into `validate.py`. There's a lot of duplication here which can be abstracted and refactored over time. """ import sys from collections import defaultdict def ensure_no_duplicate_names(root, ValidateError): """ Check that all node names are identical, which is required for auspice (v2) JSONs. """ names = set() def recurse(node): if node["name"] in names: raise ValidateError(f"Node {node['name']} appears multiple times in the tree.") names.add(node["name"]) if "children" in node: [recurse(child) for child in node["children"]] recurse(root) def collectTreeAttrsV2(root, warn): """ Collect all keys specified on `node["node_attrs"]` throughout the tree and the values associated with them. Note that this will only look at attributes which are themselves objects with a `value` property. I.e. a node attribute `node["node_attrs"]["div"] -> numeric` will not be collected. Returns a tuple. return[0]: dict of `node_attr_property` -> x, where x is a dict with keys `count` -> INT, `values` -> SET, `onAllNodes` -> BOOL. return[1]: INT of number of terminal nodes in tree """ seen = defaultdict(lambda: {"count": 0, "values": set(), "onAllNodes": False}) num_nodes, num_terminal = (0, 0) def recurse(node): nonlocal num_nodes, num_terminal num_nodes += 1 for prop, info in node.get("node_attrs", {}).items(): if not isinstance(info, dict) or "value" not in info: continue seen[prop]["count"] += 1 seen[prop]["values"].add(info["value"]) if "children" in node: [recurse(child) for child in node["children"]] else: num_terminal += 1 recurse(root) for data in seen.values(): if data["count"] == num_nodes: data["onAllNodes"] = True return(seen, num_terminal) def collectMutationGenes(root): """ Returns a set of all genes specified in the tree in the "aa_muts" objects """ genes = set() def recurse(node): mutations = node.get("branch_attrs", {}).get("mutations", False) if mutations: genes.update(mutations.keys()) if "children" in node: [recurse(child) for child in node["children"]] recurse(root) genes -= {"nuc"} return genes def collectBranchLabels(root): labels = set() def recurse(node): labels.update(node.get("branch_attrs", {}).get("labels", {}).keys()) if "children" in node: [recurse(child) for child in node["children"]] recurse(root) return labels def verifyMainJSONIsInternallyConsistent(data, ValidateError): """ Check possible sources of conflict within the main (unified) JSON This function is only used for schema v2.0 In an ideal world, the JSON schema would be able to validate this, however this function performs tests which are not possible to define in the schema (as of JSON schema v6). """ warnings = False def warn(msg): nonlocal warnings warnings = True print("\tWARNING: ", msg, file=sys.stderr) print("Validating that the JSON is internally consistent...") ensure_no_duplicate_names(data["tree"], ValidateError) if "entropy" in data["meta"]["panels"] and "genome_annotations" not in data["meta"]: warn("The entropy panel has been specified but annotations don't exist.") tree_traits, _ = collectTreeAttrsV2(data["tree"], warn) if "geo_resolutions" in data["meta"]: for geo_res in data["meta"]["geo_resolutions"]: geo_name = geo_res["key"] deme_to_lat_longs = geo_res["demes"] if geo_name not in tree_traits: warn("The geographic resolution \"{}\" does not appear on any tree nodes.".format(geo_name)) continue # pass 1: check the demes in "geo_resolutions" are found on the tree for geoValue in deme_to_lat_longs.keys(): if geoValue not in tree_traits[geo_name]["values"]: warn("\"{}\", a value of the geographic resolution \"{}\", does not appear on any tree nodes.".format(geoValue, geo_name)) # pass 1: check the demes across the tree are represented in "geo_resolutions" for geoValue in tree_traits[geo_name]["values"]: if geoValue not in deme_to_lat_longs: warn("\"{}\", a value of the geographic resolution \"{}\", appears in the tree but not in the metadata." "\n\t\tThis will cause transmissions & demes involving this location not to be displayed in Auspice".format(geoValue, geo_name)) else: if "map" in data["meta"]["panels"]: warn("Map panel was requested but no geographic_info was provided") if "colorings" in data["meta"]: for coloring in data["meta"]["colorings"]: colorBy = coloring["key"] if colorBy == "gt": continue if colorBy not in tree_traits: warn("The coloring \"{}\" does not appear as an attr on any tree nodes.".format(colorBy)) if "scale" in coloring: scale = coloring["scale"] if isinstance(scale, list): for value, hex in scale: if value not in tree_traits[colorBy]["values"]: warn("Color option \"{}\" specifies a hex code for \"{}\" but this isn't ever seen on the tree nodes.".format(colorBy, value)) elif isinstance(scale, str): raise ValidateError("String colour scales are not yet implemented") else: raise ValidateError("Invalid color scale (for trait \"{}\")".format(colorBy)) if "domain" in coloring: domain = coloring["domain"] if coloring["type"] in ["ordinal", "categorical"]: inMetaNotInTree = [val for val in domain if val not in tree_traits[colorBy]["values"]] if len(inMetaNotInTree): warn("Domain for {} defined the following values which are not present on the tree: {}".format(colorBy, inMetaNotInTree.join(", "))) inTreeNotInMeta = [val for val in tree_traits[colorBy]["values"] if val not in domain] if len(inTreeNotInMeta): warn("Tree defined values for {} which were not in the domain: {}".format(colorBy, inTreeNotInMeta.join(", "))) elif coloring["type"] == "boolean": raise ValidateError("Cannot povide a domain for a boolean coloring ({})".format(colorBy)) else: warn("No colourings were provided") if "filters" in data["meta"]: for filter in data["meta"]["filters"]: if filter not in tree_traits: warn("The filter \"{}\" does not appear as a property on any tree nodes.".format(filter)) genes_with_mutations = collectMutationGenes(data['tree']) if len(genes_with_mutations): if "genome_annotations" not in data["meta"]: warn("The tree defined mutations on genes {}, but annotations aren't defined in the meta JSON.".format(", ".join(genes_with_mutations))) else: for gene in genes_with_mutations: if gene not in data["meta"]["genome_annotations"]: warn("The tree defined mutations on gene {} which doesn't appear in the metadata annotations object.".format(gene)) default_branch_label = data.get("meta").get("display_defaults", {}).get("branch_label") if default_branch_label and default_branch_label.lower() != "none": labels = collectBranchLabels(data['tree']) if not default_branch_label in labels: warn("Default label to display \"{}\" isn't found anywhere on the tree!".format(default_branch_label)) return not warnings def collectTreeAttrsV1(root): """ Collect all keys specified on node->attr (or node->traits) throughout the tree If the values of these keys are strings, then also collect the values """ seen = defaultdict(lambda: {"count": 0, "values": set(), "onAllNodes": False}) num_nodes, num_terminal = (0, 0) def recurse(node): nonlocal num_nodes, num_terminal num_nodes += 1 traits = node["attr"].keys() for property in traits: seen[property]["count"] += 1 value = node["attr"][property] if isinstance(value, str): seen[property]["values"].add(value) if "children" in node: [recurse(child) for child in node["children"]] else: num_terminal += 1 recurse(root) for data in seen.values(): if data["count"] == num_nodes: data["onAllNodes"] = True return(seen, num_terminal) def collectAAMutationGenesV1(root): """ Returns a set of all genes specified in the tree in the "aa_muts" objects """ genes = set() def recurse(node): if "aa_muts" in node and len(node["aa_muts"]): genes.update(node["aa_muts"].keys()) if "children" in node: [recurse(child) for child in node["children"]] recurse(root) return genes def verifyMetaAndOrTreeJSONsAreInternallyConsistent(meta_json, tree_json, ValidateError): """ Check all possible sources of conflict internally & between the metadata & tree JSONs This is only that which cannot be checked by the schemas """ warnings = False def warn(msg): nonlocal warnings warnings = True print("\tWARNING: ", msg, file=sys.stderr) print("Validating that meta + tree JSONs are internally consistent...") mj = meta_json if "panels" in mj and "entropy" in mj["panels"] and "annotations" not in mj: warn("\tERROR: The entropy panel has been specified but annotations don't exist.") tj = tree_json treeAttrs, num_terminal_nodes = collectTreeAttrsV1(tj) if "geo" in mj: for geoName in mj["geo"]: if geoName not in treeAttrs: warn("The geographic resolution \"{}\" does not appear as an attr on any tree nodes.".format(geoName)) else: for geoValue in mj["geo"][geoName]: if geoValue not in treeAttrs[geoName]["values"]: warn("\"{}\", a value of the geographic resolution \"{}\", does not appear as a value of attr->{} on any tree nodes.".format(geoValue, geoName, geoName)) for geoValue in treeAttrs[geoName]["values"]: if geoValue not in mj["geo"][geoName]: warn("\"{}\", a value of the geographic resolution \"{}\", appears in the tree but not in the metadata.".format(geoValue, geoName)) warn("\tThis will cause transmissions & demes involving this location not to be displayed in Auspice") if "color_options" in mj: for colorBy in [x for x in mj["color_options"] if x != "gt"]: if colorBy not in treeAttrs: warn("The color_option \"{}\" does not appear as an attr on any tree nodes.".format(colorBy)) elif "color_map" in mj["color_options"][colorBy]: # if there's a color_map, then check that there are no values which aren't seen on the tree for (value, hex) in mj["color_options"][colorBy]["color_map"]: if value not in treeAttrs[colorBy]["values"]: warn("Color option \"{}\" specifies a hex code for \"{}\" but this isn't ever seen on the tree nodes.".format(colorBy, value)) # inversely, check for values on the tree not defined in the color_map for value in treeAttrs[colorBy]["values"]: color_map_values = [x[0] for x in mj["color_options"][colorBy]["color_map"]] if value not in color_map_values: warn("Color option \"{}\", which contains a color_map, is missing \"{}\"".format(colorBy, value)) if "filters" in mj: for filter in mj["filters"]: if filter not in treeAttrs: warn("The filter \"{}\" does not appear on any tree nodes.".format(filter)) if "virus_count" in mj and mj["virus_count"] != num_terminal_nodes: raise ValidateError("Meta JSON virus_count ({}) differs from the number of nodes in the tree ({})".format(mj["virus_count"], num_terminal_nodes)) genes_with_aa_muts = collectAAMutationGenesV1(tj) if len(genes_with_aa_muts): if "annotations" not in mj: warn("The tree defined AA mutations on genes {}, but annotations aren't defined in the meta JSON.".format(", ".join(genes_with_aa_muts))) else: for gene in genes_with_aa_muts: if gene not in mj["annotations"]: warn("The tree defined AA mutations on gene {} which doesn't appear in the metadata annotations object.".format(gene)) return not warnings augur-24.2.2/augur/version.py000066400000000000000000000003601456376326500161260ustar00rootroot00000000000000""" Print the version of augur. """ from .__version__ import __version__ def register_parser(parent_subparsers): return parent_subparsers.add_parser("version", help=__doc__) def run(args): print("augur", __version__) return 0 augur-24.2.2/bin/000077500000000000000000000000001456376326500135155ustar00rootroot00000000000000augur-24.2.2/bin/augur000077500000000000000000000012331456376326500145650ustar00rootroot00000000000000#!/usr/bin/env python3 # # This script is only used in development. Package installations will use a # similar "augur" script automatically created using the entry point feature of # setuptools. # from sys import path, exit from pathlib import Path # Try to add our containing package source directory to the Python module # search path so that we load augur from there instead of any installed # system-wide. try: dev_path = Path(__file__).parent.parent # Raises an exception if the path doesn't exist. (dev_path / "augur/__init__.py").resolve() except: pass else: path.insert(0, str(dev_path)) from augur.__main__ import main exit( main() ) augur-24.2.2/codecov.yml000066400000000000000000000005071456376326500151140ustar00rootroot00000000000000comment: # Only post a codecov comment if coverage changes. require_changes: true coverage: status: # Disable GitHub checks for code coverage that make otherwise valid builds fail. project: off patch: off github_checks: # Disable inline annotations of code coverage in pull requests. annotations: false augur-24.2.2/devel/000077500000000000000000000000001456376326500140445ustar00rootroot00000000000000augur-24.2.2/devel/changes000077500000000000000000000015621456376326500154060ustar00rootroot00000000000000#!/usr/bin/env python3 """ Extract changelog for a specified version (or __NEXT__ if no version specified). """ from pathlib import Path from sys import argv, exit, stdout, stderr CHANGELOG = Path(__file__).parent / "../CHANGES.md" def main(version = "__NEXT__"): with CHANGELOG.open(encoding = "utf-8") as file: for line in file: # Find the heading for this version if line.rstrip("\n") == f"## {version}" or line.startswith(f"## {version} "): # Print subsequent lines until we reach the next version heading for line in file: if line.startswith("## "): break stdout.write(line) return 0 print(f"No changes found for {version!r}.", file = stderr) return 1 if __name__ == "__main__": exit(main(*argv[1:])) augur-24.2.2/devel/create-github-release000077500000000000000000000027721456376326500201430ustar00rootroot00000000000000#!/bin/bash set -euo pipefail shopt -s extglob devel="$(dirname "$0")" main() { local version="${1:?version is required}" local commit pre_release shift local -a assets=("$@") if [[ ${#assets[@]} -eq 0 ]]; then echo "ERROR: no assets provided" >&2 exit 1 fi # Asserts that $version is an actual tag, not a branch name or other ref. git rev-parse --verify "$version^{tag}" >/dev/null # Translate from tag into commit for `gh release create --target`. commit="$(git rev-parse --verify "$version^{commit}")" if is-pre-release "$version"; then pre_release=1 fi gh release create \ "$version" \ --repo "${GITHUB_REPOSITORY:-nextstrain/augur}" \ --title "$version" \ --target "$commit" \ ${pre_release:+--prerelease} \ --notes-file <(preamble; "$devel"/changes "$version") \ "${assets[@]}" } is-pre-release() { # See https://peps.python.org/pep-0440/ local version="$1" case "$version" in *@(a|b|rc|c)+([0-9])*) # alpha, beta, release candidate (PEP 440 pre-releases) return 0;; *.dev+([0-9])*) # dev release return 0;; *+*) # local version return 0;; *) return 1;; esac } preamble() { cat <<~~ _These release notes are automatically extracted from the full [changelog][]._ [changelog]: https://github.com/nextstrain/augur/blob/-/CHANGES.md#readme ~~ } main "$@" augur-24.2.2/devel/release000077500000000000000000000111261456376326500154130ustar00rootroot00000000000000#!/bin/bash # # Prepares a new version release locally, leaving you ready to either: # # A. Push and upload it if you're satisfied with the state of git and the # built distributions, or… # # B. Rewind the process if you're not (via devel/rewind-release or # manually). # # If you have GPG and git's user.signingKey option configured, a signed tag # will be created. Otherwise, an unsigned annotated tag will be used. # # The script will prompt you for the new version if you do not provide it as # the sole argument. # set -euo pipefail devel="$(dirname $0)" repo="$devel/.." version_file="$repo/augur/__version__.py" changes_file="$repo/CHANGES.md" main() { assert-clean-working-dir assert-changelog-has-additions if [[ $# -gt 0 ]]; then version="$1" else version=$(next-version) fi assert-version-is-new $version update-version $version update-changelog $version commit-and-tag $version build-dist remind-to-push $version } assert-clean-working-dir() { local status="$(git status --porcelain --untracked-files=no | grep -vwF "$(basename "$changes_file")" || true)" if [[ -n $status ]]; then echo "Please commit all changes before releasing:" >&2 echo >&2 echo "$status" >&2 echo >&2 echo "Only $(basename "$changes_file") is allowed to have uncommitted changes." >&2 exit 1 fi } assert-changelog-has-additions() { local current_version="$(read-version)" local numstat="$(git diff --numstat "$current_version" -- "$changes_file")" local insertions deletions rest if [[ -z $numstat ]]; then insertions=0 deletions=0 else read -r insertions deletions rest <<<"$numstat" fi local net_changed=$(($insertions - $deletions)) if [[ $net_changed -lt 1 ]]; then echo "It doesn't look like $(basename "$changes_file") was updated; only $insertions - $deletions = $net_changed line(s) were changed." >&2 exit 1 fi } assert-version-is-new() { local current_version="$(read-version)" local new_version="$1" if [[ -z $new_version || $new_version == $current_version ]]; then echo "You must provide a new version!" >&2 exit 1 elif ! version-is-gt $current_version $new_version; then echo "You must provide a new version greater than the last!" >&2 exit 1 fi } version-is-gt() { python3 /dev/stdin "$1" "$2" <<<"$(cut -c 9- <<<' from sys import argv, exit from packaging.version import Version version = list(map(Version, argv[1:3])) gt = version[1] > version[0] exit(int(not gt)) ')" } next-version() { local current_version="$(read-version)" # The ancient version of bash on macOS does not support the -i option, so # test if it works before using it. if read -i supported <<<"" 2>/dev/null >&2; then read -e -p "Current version is $current_version."$'\n'"New version? " -i "$current_version" new_version else read -e -p "Current version is $current_version."$'\n'"New version? " new_version fi echo "$new_version" } update-version() { local new_version="$1" local current_version="$(read-version)" perl -pi -e "s/(?<=^__version__ = ')(.*)(?='$)/$new_version/" "$version_file" if [[ $new_version != $(read-version) ]]; then echo "Failed to update $version_file!" >&2 exit 1 fi } update-changelog() { local new_version="$1" local today="$(date +"%d %B %Y")" # Remove leading zero from day if present today="${today#0}" # Add the new version heading immediately after the __NEXT__ heading, # preserving the __NEXT__ heading itself. perl -pi -e "s/(?<=^## __NEXT__$)/\n\n\n## $new_version ($today)/" "$changes_file" } commit-and-tag() { local version="$1" git commit -m "version $version" "$version_file" "$changes_file" if [[ -n "$(git config user.signingKey)" ]]; then git tag -sm "version $version" "$version" else git tag -am "version $version" "$version" fi } build-dist() { rm -rfv build/ dist/ nextstrain_augur.egg-info python3 -m build } remind-to-push() { local version="$1" echo echo echo "Version updated, committed, and tagged!" echo echo "Please remember to push, including tags:" echo echo " git push origin master tag $version" echo echo "You'll also want to upload the built releases to PyPi:" echo echo " twine upload dist/*" echo } read-version() { python3 -c "exec(open('''$version_file''').read()); print(__version__)" } main "$@" augur-24.2.2/devel/test000077500000000000000000000021051456376326500147470ustar00rootroot00000000000000#!/bin/bash # # Runs tests in a sandboxed environment that loosely replicates the GitHub Actions # environment. set -euo pipefail # Conda functions are not exported into a new bash environment by default, so we # need to source the conda profile script from the current conda installation. # This script expects PS1 to be defined, so we set it to an empty value. export PS1= conda_dir=$(conda info --base) source "${conda_dir}/etc/profile.d/conda.sh" ENV_NAME="test-augur" # Install mamba if not available to avoid Conda solver issues if [[ ! -e "`which mamba`" ]]; then echo Installing Mamba conda install --yes -n base -c conda-forge mamba fi # Install Augur from the current directory into a new conda environment. echo Setting up Conda test environment with mamba mamba create --yes --quiet -n ${ENV_NAME} -c conda-forge -c bioconda augur conda activate ${ENV_NAME} python3 -m pip install .[dev] # Run unit and functional tests. echo Running tests ./run_tests.sh || true # Clean up the temporary environment. echo Cleaning up conda deactivate conda env remove -n ${ENV_NAME} augur-24.2.2/docs/000077500000000000000000000000001456376326500136755ustar00rootroot00000000000000augur-24.2.2/docs/Makefile000066400000000000000000000013221456376326500153330ustar00rootroot00000000000000# Minimal makefile for Sphinx documentation # # You can set these variables from the command line, and also # from the environment for the first two. SPHINXOPTS ?= -n SPHINXBUILD ?= sphinx-build SOURCEDIR = . BUILDDIR = _build # Put it first so that "make" without argument is like "make help". help: @$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) .PHONY: help Makefile # Catch-all target: route all unknown targets to Sphinx using the new # "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS). %: Makefile @$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) livehtml: sphinx-autobuild -b html "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) augur-24.2.2/docs/_static/000077500000000000000000000000001456376326500153235ustar00rootroot00000000000000augur-24.2.2/docs/_static/.gitkeep000066400000000000000000000000001456376326500167420ustar00rootroot00000000000000augur-24.2.2/docs/_static/css/000077500000000000000000000000001456376326500161135ustar00rootroot00000000000000augur-24.2.2/docs/_static/css/custom.css000066400000000000000000000001631456376326500201370ustar00rootroot00000000000000h1 { font-size: 36px; } h2 { font-size: 30px; } h3 { font-size: 24px; } h4 { font-size: 18px; } augur-24.2.2/docs/api/000077500000000000000000000000001456376326500144465ustar00rootroot00000000000000augur-24.2.2/docs/api/developer/000077500000000000000000000000001456376326500164335ustar00rootroot00000000000000augur-24.2.2/docs/api/developer/augur.align.rst000066400000000000000000000001531456376326500214000ustar00rootroot00000000000000augur.align =========== .. automodule:: augur.align :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.ancestral.rst000066400000000000000000000001671456376326500222670ustar00rootroot00000000000000augur.ancestral =============== .. automodule:: augur.ancestral :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.clades.rst000066400000000000000000000001561456376326500215440ustar00rootroot00000000000000augur.clades ============ .. automodule:: augur.clades :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.dates.ambiguous_date.rst000066400000000000000000000002461456376326500244000ustar00rootroot00000000000000augur.dates.ambiguous\_date ======================================= .. automodule:: augur.dates.ambiguous_date :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.dates.errors.rst000066400000000000000000000002001456376326500227120ustar00rootroot00000000000000augur.dates.errors ================== .. automodule:: augur.dates.errors :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.dates.rst000066400000000000000000000002561456376326500214120ustar00rootroot00000000000000augur.dates =========== .. automodule:: augur.dates :members: :undoc-members: :show-inheritance: .. toctree:: augur.dates.ambiguous_date augur.dates.errors augur-24.2.2/docs/api/developer/augur.distance.rst000066400000000000000000000001641456376326500221020ustar00rootroot00000000000000augur.distance ============== .. automodule:: augur.distance :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.errors.rst000066400000000000000000000001561456376326500216250ustar00rootroot00000000000000augur.errors ============ .. automodule:: augur.errors :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.export.rst000066400000000000000000000001561456376326500216320ustar00rootroot00000000000000augur.export ============ .. automodule:: augur.export :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.export_v1.rst000066400000000000000000000001711456376326500222350ustar00rootroot00000000000000augur.export\_v1 ================ .. automodule:: augur.export_v1 :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.export_v2.rst000066400000000000000000000001711456376326500222360ustar00rootroot00000000000000augur.export\_v2 ================ .. automodule:: augur.export_v2 :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.filenames.rst000066400000000000000000000001671456376326500222560ustar00rootroot00000000000000augur.filenames =============== .. automodule:: augur.filenames :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.filter._run.rst000066400000000000000000000001751456376326500225410ustar00rootroot00000000000000augur.filter._run ================= .. automodule:: augur.filter._run :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.filter.include_exclude_rules.rst000066400000000000000000000002601456376326500261370ustar00rootroot00000000000000augur.filter.include_exclude_rules ================================== .. automodule:: augur.filter.include_exclude_rules :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.filter.io.rst000066400000000000000000000001671456376326500222060ustar00rootroot00000000000000augur.filter.io =============== .. automodule:: augur.filter.io :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.filter.rst000066400000000000000000000004101456376326500215670ustar00rootroot00000000000000augur.filter ============ .. automodule:: augur.filter :members: :undoc-members: :show-inheritance: .. toctree:: augur.filter._run augur.filter.include_exclude_rules augur.filter.io augur.filter.subsample augur.filter.validate_arguments augur-24.2.2/docs/api/developer/augur.filter.subsample.rst000066400000000000000000000002141456376326500235630ustar00rootroot00000000000000augur.filter.subsample ====================== .. automodule:: augur.filter.subsample :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.filter.validate_arguments.rst000066400000000000000000000002471456376326500254540ustar00rootroot00000000000000augur.filter.validate_arguments =============================== .. automodule:: augur.filter.validate_arguments :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.frequencies.rst000066400000000000000000000001751456376326500226230ustar00rootroot00000000000000augur.frequencies ================= .. automodule:: augur.frequencies :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.frequency_estimators.rst000066400000000000000000000002321456376326500245570ustar00rootroot00000000000000augur.frequency\_estimators =========================== .. automodule:: augur.frequency_estimators :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.import.rst000066400000000000000000000001571456376326500216240ustar00rootroot00000000000000augur.import ============ .. automodule:: augur.import_ :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.index.rst000066400000000000000000000001531456376326500214150ustar00rootroot00000000000000augur.index =========== .. automodule:: augur.index :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.io.file.rst000066400000000000000000000001611456376326500216320ustar00rootroot00000000000000augur.io.file ============= .. automodule:: augur.io.file :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.io.json.rst000066400000000000000000000001611456376326500216640ustar00rootroot00000000000000augur.io.json ============= .. automodule:: augur.io.json :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.io.metadata.rst000066400000000000000000000001751456376326500225000ustar00rootroot00000000000000augur.io.metadata ================= .. automodule:: augur.io.metadata :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.io.print.rst000066400000000000000000000001641456376326500220520ustar00rootroot00000000000000augur.io.print ============== .. automodule:: augur.io.print :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.io.rst000066400000000000000000000004161456376326500207170ustar00rootroot00000000000000augur.io ======== .. automodule:: augur.io :members: :undoc-members: :show-inheritance: :noindex: .. toctree:: augur.io.file augur.io.json augur.io.metadata augur.io.print augur.io.sequences augur.io.shell_command_runner augur.io.vcf augur-24.2.2/docs/api/developer/augur.io.sequences.rst000066400000000000000000000002001456376326500227000ustar00rootroot00000000000000augur.io.sequences ================== .. automodule:: augur.io.sequences :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.io.shell_command_runner.rst000066400000000000000000000002411456376326500251100ustar00rootroot00000000000000augur.io.shell_command_runner ============================= .. automodule:: augur.io.shell_command_runner :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.io.vcf.rst000066400000000000000000000001561456376326500214750ustar00rootroot00000000000000augur.io.vcf ============ .. automodule:: augur.io.vcf :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.lbi.rst000066400000000000000000000001451456376326500210550ustar00rootroot00000000000000augur.lbi ========= .. automodule:: augur.lbi :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.mask.rst000066400000000000000000000001501456376326500212360ustar00rootroot00000000000000augur.mask ========== .. automodule:: augur.mask :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.measurements.concat.rst000066400000000000000000000002251456376326500242640ustar00rootroot00000000000000augur.measurements.concat ========================= .. automodule:: augur.measurements.concat :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.measurements.export.rst000066400000000000000000000002251456376326500243360ustar00rootroot00000000000000augur.measurements.export ========================= .. automodule:: augur.measurements.export :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.measurements.rst000066400000000000000000000003111456376326500230120ustar00rootroot00000000000000augur.measurements ================== .. automodule:: augur.measurements :members: :undoc-members: :show-inheritance: .. toctree:: augur.measurements.concat augur.measurements.export augur-24.2.2/docs/api/developer/augur.parse.rst000066400000000000000000000001531456376326500214200ustar00rootroot00000000000000augur.parse =========== .. automodule:: augur.parse :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.reconstruct_sequences.rst000066400000000000000000000002351456376326500247350ustar00rootroot00000000000000augur.reconstruct\_sequences ============================ .. automodule:: augur.reconstruct_sequences :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.refine.rst000066400000000000000000000001561456376326500215610ustar00rootroot00000000000000augur.refine ============ .. automodule:: augur.refine :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.rst000066400000000000000000000013201456376326500203040ustar00rootroot00000000000000augur ===== .. automodule:: augur :members: :undoc-members: :show-inheritance: .. toctree:: augur.align augur.ancestral augur.clades augur.dates augur.distance augur.errors augur.export augur.export_v1 augur.export_v2 augur.filenames augur.filter augur.frequencies augur.frequency_estimators augur.import augur.index augur.io augur.lbi augur.mask augur.measurements augur.parse augur.reconstruct_sequences augur.refine augur.sequence_traits augur.titer_model augur.titers augur.traits augur.translate augur.tree augur.types augur.util_support augur.utils augur.validate augur.validate_export augur.version augur-24.2.2/docs/api/developer/augur.sequence_traits.rst000066400000000000000000000002131456376326500235010ustar00rootroot00000000000000augur.sequence\_traits ====================== .. automodule:: augur.sequence_traits :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.titer_model.rst000066400000000000000000000001771456376326500226230ustar00rootroot00000000000000augur.titer\_model ================== .. automodule:: augur.titer_model :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.titers.rst000066400000000000000000000001561456376326500216230ustar00rootroot00000000000000augur.titers ============ .. automodule:: augur.titers :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.traits.rst000066400000000000000000000001561456376326500216170ustar00rootroot00000000000000augur.traits ============ .. automodule:: augur.traits :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.translate.rst000066400000000000000000000001671456376326500223100ustar00rootroot00000000000000augur.translate =============== .. automodule:: augur.translate :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.tree.rst000066400000000000000000000001501456376326500212420ustar00rootroot00000000000000augur.tree ========== .. automodule:: augur.tree :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.types.rst000066400000000000000000000001531456376326500214520ustar00rootroot00000000000000augur.types =========== .. automodule:: augur.types :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.util_support.color_parser.rst000066400000000000000000000002531456376326500255510ustar00rootroot00000000000000augur.util\_support.color\_parser ================================= .. automodule:: augur.util_support.color_parser :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.util_support.color_parser_line.rst000066400000000000000000000002741456376326500265630ustar00rootroot00000000000000augur.util\_support.color\_parser\_line ======================================= .. automodule:: augur.util_support.color_parser_line :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.util_support.node_data.rst000066400000000000000000000002421456376326500247730ustar00rootroot00000000000000augur.util\_support.node\_data ============================== .. automodule:: augur.util_support.node_data :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.util_support.node_data_file.rst000066400000000000000000000002631456376326500257750ustar00rootroot00000000000000augur.util\_support.node\_data\_file ==================================== .. automodule:: augur.util_support.node_data_file :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.util_support.node_data_reader.rst000066400000000000000000000002711456376326500263170ustar00rootroot00000000000000augur.util\_support.node\_data\_reader ====================================== .. automodule:: augur.util_support.node_data_reader :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.util_support.rst000066400000000000000000000005101456376326500230540ustar00rootroot00000000000000augur.util\_support =================== .. automodule:: augur.util_support :members: :undoc-members: :show-inheritance: .. toctree:: augur.util_support.color_parser augur.util_support.color_parser_line augur.util_support.node_data augur.util_support.node_data_file augur.util_support.node_data_reader augur-24.2.2/docs/api/developer/augur.utils.rst000066400000000000000000000001531456376326500214460ustar00rootroot00000000000000augur.utils =========== .. automodule:: augur.utils :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.validate.rst000066400000000000000000000001641456376326500221010ustar00rootroot00000000000000augur.validate ============== .. automodule:: augur.validate :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.validate_export.rst000066400000000000000000000002131456376326500234750ustar00rootroot00000000000000augur.validate\_export ====================== .. automodule:: augur.validate_export :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/augur.version.rst000066400000000000000000000001611456376326500217720ustar00rootroot00000000000000augur.version ============= .. automodule:: augur.version :members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/developer/index.rst000066400000000000000000000007651456376326500203040ustar00rootroot00000000000000============= Developer API ============= .. warning:: If you are importing Augur in your Python scripts, use :doc:`the public API <../public/index>`. While anything in this API can be imported from an external script, changes are not guaranteed to be versioned or included in the changelog. These pages contain documentation automatically generated from docstrings within the Augur codebase. They are intended for people developing Augur. .. toctree:: :maxdepth: 3 :glob: augur augur-24.2.2/docs/api/public/000077500000000000000000000000001456376326500157245ustar00rootroot00000000000000augur-24.2.2/docs/api/public/augur.io.rst000066400000000000000000000003201456376326500202020ustar00rootroot00000000000000augur.io ======== .. The public API portion of augur.io is everything that is exposed by io/__init__.py. .. automodule:: augur.io :members: :imported-members: :undoc-members: :show-inheritance: augur-24.2.2/docs/api/public/index.rst000066400000000000000000000007541456376326500175730ustar00rootroot00000000000000================= Python Public API ================= .. note:: If you are using ``augur`` as a command line program, then please see the :doc:`using Augur <../../usage/usage>` section. These pages contain documentation automatically generated from docstrings within the Augur codebase. They are intended for people importing Augur into their Python scripts. Any updates to this API will be versioned and included in the changelog. .. toctree:: :maxdepth: 3 :glob: augur.io augur-24.2.2/docs/authors/000077500000000000000000000000001456376326500153625ustar00rootroot00000000000000augur-24.2.2/docs/authors/authors.rst000066400000000000000000000001061456376326500175760ustar00rootroot00000000000000======= Authors ======= Augur includes contributions from |authors|. augur-24.2.2/docs/conf.py000066400000000000000000000115251456376326500152000ustar00rootroot00000000000000# Configuration file for the Sphinx documentation builder. # # This file only contains a selection of the most common options. For a full # list see the documentation: # http://www.sphinx-doc.org/en/master/config # -- Path setup -------------------------------------------------------------- # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # documentation root, use os.path.abspath to make it absolute, like shown here. # import os import sys sys.path.insert(0, os.path.abspath('..')) # -- Project information ----------------------------------------------------- from augur.__version__ import __version__ as augur_version from datetime import date import subprocess def git_authors(): result = subprocess.run( ["git", "shortlog", "--summary", "HEAD"], stdout = subprocess.PIPE, check = True) names = [ line.strip().split("\t")[1] for line in result.stdout.decode("utf-8").splitlines() ] return names def prose_list(items): if not items: return "" if len(items) == 1: return items[0] elif len(items) == 2: return " and ".join(items) else: return ", ".join([*items[0:-1], "and " + items[-1]]) project = 'Augur' version = augur_version release = version copyright = '2014–%d Trevor Bedford and Richard Neher' % (date.today().year) author = prose_list(git_authors()) # -- General configuration --------------------------------------------------- # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'recommonmark', 'sphinx.ext.autodoc', 'sphinxarg.ext', 'sphinx.ext.napoleon', 'sphinx_autodoc_typehints', # must come after napoleon https://github.com/tox-dev/sphinx-autodoc-typehints/blob/1.21.4/README.md#compatibility-with-sphinxextnapoleon 'sphinx_markdown_tables', 'sphinx.ext.intersphinx', 'sphinx_tabs.tabs', 'nextstrain.sphinx.theme', ] # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. # This pattern also affects html_static_path and html_extra_path. exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store', 'contribute/DEV_DOCS.md', 'faq/colors.md', 'faq/fasta_input.md', 'faq/import-beast.md', 'faq/lat_longs.md', 'faq/seq_traits.md', 'faq/translate_ref.md', 'faq/vcf_input.md', 'usage/augur_snakemake.md', ] # A string of reStructuredText that will be included at the end of every source # file that is read. This is a possible place to add substitutions that should # be available in every file. rst_epilog = f""" .. |authors| replace:: {author} """ # -- Options for HTML output ------------------------------------------------- # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. # html_theme = 'nextstrain-sphinx-theme' html_theme_options = { 'logo_only': False, # if True, don't display project name at top of the sidebar 'collapse_navigation': False, # if True, no [+] icons in sidebar 'titles_only': True, # if True, page subheadings not included in nav } # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". html_static_path = ['_static'] # These paths are either relative to html_static_path # or fully qualified paths (eg. https://...) html_css_files = [ 'css/custom.css', ] # -- Resolve build warnings -------------------------------------------------- nitpick_ignore = [ # These are valid numpydoc keywords¹, but somehow they are not recognized by # napoleon. # ¹ https://numpydoc.readthedocs.io/en/v1.5.0/format.html#parameters ('py:class', 'optional'), ('py:class', 'iterable'), # Some references get translated to these, but somehow they can't get # resolved by intersphinx for a proper link. ("py:class", "json.decoder.JSONDecodeError"), ("py:class", "json.encoder.JSONEncoder"), ] # -- Cross-project references ------------------------------------------------ intersphinx_mapping = { 'Bio': ('https://biopython.org/docs/latest/api/', None), 'docs.nextstrain.org': ('https://docs.nextstrain.org/en/latest/', None), 'cli': ('https://docs.nextstrain.org/projects/cli/en/stable', None), 'python': ('https://docs.python.org/3', None), 'numpy': ('https://numpy.org/doc/stable', None), 'pandas': ('https://pandas.pydata.org/docs', None), 'treetime': ('https://treetime.readthedocs.io/en/stable/', None), } augur-24.2.2/docs/contribute/000077500000000000000000000000001456376326500160535ustar00rootroot00000000000000augur-24.2.2/docs/contribute/DEV_DOCS.md000066400000000000000000000440671456376326500176360ustar00rootroot00000000000000# Augur Development Docs for Contributors Thank you for helping us to improve Augur! Use the GitHub markdown preview sidebar to navigate the sections in this document. ## Getting started To be an effective, productive contributor, please start by reading the [**Nextstrain contributing guide**](https://github.com/nextstrain/.github/blob/master/CONTRIBUTING.md) for useful information about how to pick an issue, submit your contributions, and so on. This project strictly adheres to the [Contributor Covenant Code of Conduct](https://github.com/nextstrain/.github/blob/master/CODE_OF_CONDUCT.md). Please see the [open issues list](https://github.com/nextstrain/augur/issues) for currently available issues. ## Contributing code We currently target compatibility with Python 3.8 and higher. As Python releases new versions, the minimum target compatibility may be increased in the future. ### Running local changes While you are making code changes, you will want to run augur to see it behavior with those changes. To to test your local changes (without installing them to your system), run the following **convenience script** from the root of your cloned git repository: ```bash ./bin/augur ``` Note that the `./bin/augur` convenience script is not installing `augur` system-wide with pip. As an alternative to using the convenience script and to install the dev dependencies, you can install augur from source as an **editable package** so that your global `augur` command always uses your local source code copy: ```bash pip install -e '.[dev]' ``` Using an "editable package" is not recommended if you want to be able to compare output from a stable, released version of augur with your development version (e.g. comparing output of `augur` installed with pip and `./bin/augur` from your local source code). ### Testing Writing good tests and running tests helps maintain code quality and eases future refactoring. We use [pytest](https://docs.pytest.org) and [Cram](https://bitheap.org/cram/) to test augur. This section will describe how to write and run tests, and when they are run automatically. #### Writing Tests It's good practice to write **unit tests** for any code contribution. The [pytest documentation](https://docs.pytest.org) and [Python documentation](https://docs.python.org) are good references for unit tests. Augur's unit tests are located in the `tests` directory and there is generally one test file for each code file. On the other hand, [**doctests**](https://docs.python.org/3/library/doctest.html) are a type of tests that are written within a module's docstrings. They can be helpful for testing a real-world example and determining if a regression is introduced in a particular module. A pull request that contributes new code **should always contain unit tests**. Optionally, a pull request may also contain doctests if the contributor believes a doctest would improve the documentation and execution of a real world example. We test augur's command line interface with functional tests implemented with the [Cram framework](https://bitheap.org/cram/). These tests complement existing unit tests of individual augur Python functions by running augur commands on the shell and confirming that these commands: 1. execute without any errors 2. produce exactly the expected outputs for the given inputs These tests can reveal bugs resulting from untested internal functions or untested combinations fo internal functions. Functional tests should either: * suitably test a single augur command with an eponymously named Cram file in `tests/functional/` (e.g., `mask.t` for augur mask) OR * test a complete build with augur commands with an appropriately named Cram file in `tests/builds/` (e.g., `zika.t` for the example Zika build) ##### Functional tests of specific commands Functional tests of specific commands consist of a single Cram file per test and a corresponding directory of expected inputs and outputs to use for comparison of test results. The Cram file should test most reasonable combinations of command arguments and flags. ##### Functional tests of example builds Functional tests of example builds use output from a real Snakemake workflow as expected inputs and outputs. These tests should confirm that all steps of a workflow can execute and produce the expected output. These tests reflect actual augur usage in workflows and are not intended to comprehensively test interfaces for specific augur commands. The Cram file should replicate the example workflow from start to end. These tests should use the output of the Snakemake workflow (e.g., files in `zika/results/` for the Zika build test) as the expected inputs and outputs. ##### Comparing outputs of augur commands Compare deterministic outputs of augur commands with a `diff` between the expected and observed output files. For extremely simple deterministic outputs, use the expected text written to standard output instead of creating a separate expected output file. To compare trees with stochastic branch lengths: 1. provide a fixed random seed to the tree builder executable (e.g., `--tree-builder-args "-seed 314159"` for the “iqtree” method of augur tree) 2. use `scripts/diff_trees.py` instead of `diff` and optionally provide a specific number to `--significant-digits` to limit the precision that should be considered in the diff To compare JSON outputs with stochastic numerical values, use `scripts/diff_jsons.py` with the appropriate `--significant-digits` argument. Both tree and JSON comparison scripts rely on [deepdiff](https://deepdiff.readthedocs.io/en/latest/) for underlying comparisons. ##### Tips for writing Cram tests Cram is a simple testing framework that is also very versatile. Over time, we have changed the way we design and organize Augur's Cram tests. You might find older practices in existing tests that haven't been updated yet, but these are the latest guidelines that we've discovered to be helpful. 1. Keep cram files modular. This makes it easier to see which command is failing. 2. Create files in the initial working directory, as it is a temporary working directory unique to the test. Note that the name of the `$TMP` directory is misleading - although it is temporary, it is shared across all tests so you'll have to explicitly remove files at the end of each test to avoid affecting other tests. The initial directory of each test is a unique directory within `$TMP`. #### Running Tests You've written tests and now you want to run them to see if they are passing. First, you will need to [install the complete Nextstrain environment](https://nextstrain.org/docs/getting-started/local-installation) and augur dev dependencies as described above. Next, run all augur tests with the following command from the root, top-level of the augur repository: ```bash ./run_tests.sh ``` For rapid execution of a subset of unit tests (as during test-driven development), the `-k` argument will disable code coverage and functional tests and pass directly to pytest to limit the tests that are run. For example, the following command only runs unit tests related to augur mask. ```bash ./run_tests.sh -k test_mask ``` To run a specific integration test with cram, you can use the following command: ```bash cram tests/functional/clades.t ``` Troubleshooting tip: As tests run on the development code in the augur repository, your environment should not have an existing augur installation that could cause a conflict in pytest. We use continuous integration with GitHub Actions to run tests on every pull request submitted to the project. We use [codecov](https://codecov.io/) to automatically produce test coverage for new contributions and the project as a whole. ### Type annotations Our goal is to gradually add [type annotations][] to our code so that we can catch errors earlier and be explicit about the interfaces expected and provided. Annotation pairs well with the functional approach taken by the package. During development you can run static type checks using [mypy][]: $ mypy # No output is good! There are also many [editor integrations for mypy][]. [editor integrations for mypy]: https://github.com/python/mypy#integrations ### Removing features Instead of removing a feature from one release to the next, consider first deprecating the feature by adding a warning output and a [deprecation entry](../../DEPRECATED.md). This allows a period of transition time where both the deprecated feature and a suggested alternative can be adopted. ### Releasing Versions for this project, Augur, from 3.0.0 onwards aim to follow the [Semantic Versioning rules](https://semver.org). #### Steps ##### 1. Gather PRs. 1. Compare changes to find PRs and direct commits since the previous tag (replacing `X.X.X` with previous tag) - For all changes: open https://github.com/nextstrain/augur/compare/X.X.X...HEAD - For PRs: run the commands below and paste the output URL in your browser: ```sh previous_tag="X.X.X" previous_tag_date=$(git log -1 $previous_tag --format=%cd --date=format:'%Y-%m-%dT%H:%M:%SZ') echo "https://github.com/nextstrain/augur/pulls?q=is:pr%20is:closed%20merged:>$previous_tag_date" ``` 2. Define a new version number `X.X.X` based on changes and Semantic Versioning rules. > [!NOTE] > If releasing a major version, consider removing a [deprecated feature](../../DEPRECATED.md). ##### 2. Curate [CHANGES.md](../../CHANGES.md) 1. Go through each PR and note the PRs that didn't provide an update to [CHANGES.md](../../CHANGES.md). 2. For the PRs missing a changelog update, add an entry summarizing the changes in the PR. - Keep headers and formatting consistent with the rest of the file. 3. Open a PR with these changes. If changes are clear and you feel confident in the release notes, merge without PR approval. Otherwise, or if unsure, add [nextstrain/core](https://github.com/orgs/nextstrain/teams/core) as a reviewer and wait for approval before proceeding with the release. ##### 3. Run build/test/release scripts 1. Go to [this GitHub Actions workflow](https://github.com/nextstrain/augur/actions/workflows/release.yaml). 2. Select **Run workflow**. In the new menu: 1. Ensure `master` branch is selected. 2. In **New version X.X.X**, provide the new version number. 3. Select **Run workflow**. 3. Ensure workflow runs successfully. - Ensure the [docker-base CI action triggered by nextstrain-bot](https://github.com/nextstrain/docker-base/actions/workflows/ci.yml?query=branch%3Amaster+actor%3Anextstrain-bot) runs successfully. ##### 4. Update on Bioconda First, check if the Python version or dependency list in [setup.py](https://github.com/nextstrain/augur/blob/HEAD/setup.py) had any changes since the previous Augur version. If there are no such changes: 1. Wait for an auto-bump PR in [bioconda-recipes][]. 2. Add a comment `@BiocondaBot please add label`. 3. Wait for a bioconda maintainer to approve and merge. If there are changes to the Python version or dependency list: 1. Create a PR in [bioconda-recipes][] translating the changes in `setup.py` to Conda [package match specifications](https://docs.conda.io/projects/conda-build/en/stable/resources/package-spec.html#package-match-specifications). Follow instructions at [nextstrain/bioconda-recipes/README.md](https://github.com/nextstrain/bioconda-recipes/blob/readme/README.md) ([example](https://github.com/bioconda/bioconda-recipes/pull/34344)). 2. Add a comment `@BiocondaBot please add label`. 3. Wait for a bioconda maintainer to approve and merge. 4. Wait for an auto-bump PR in [bioconda-recipes][]. 5. Add a comment in the auto-bump PR `Please close this in favor of #`. [bioconda-recipes]: https://github.com/bioconda/bioconda-recipes/pull/34509 ##### 5. Build/Release Nextstrain/conda-base 1. Wait for the bioconda-recipe PR to be merged. 2. Wait for the new version of Augur to be available [on bioconda](https://anaconda.org/bioconda/augur). 3. Manually run the [conda-base CI workflow](https://github.com/nextstrain/conda-base/actions/workflows/ci.yaml) on the `main` branch. 4. Ensure workflow runs successfully. #### Notes New releases are tagged in git using an "annotated" tag. If the git option `user.signingKey` is set, the tag will also be [signed][]. Signed tags are preferred, but it can be hard to setup GPG correctly. Source and wheel (binary) distributions are uploaded to [the nextstrain-augur project on PyPi](https://pypi.org/project/nextstrain-augur). There is a `./devel/release` script which will prepare a new release from your local repository. It ends with instructions for you on how to push the release commit/tag/branch and how to upload the built distributions to PyPi. You'll need [a PyPi account][] and [twine][] installed to do the latter. After you create a new release and before you push it to GitHub, run all tests again as described above to confirm that nothing broke with the new release. If any tests fail, run the `./devel/rewind-release` script to undo the release, then fix the tests before trying again. New releases trigger a new [docker-base][] build to keep the Docker image up-to-date. This trigger is implemented as the _rebuild-docker-image_ job in the release workflow, which is explicitly conditioned on the previous _run_ job's successful completion. To trigger a Docker image rebuild without making a release, see [this section of the docker-base README](https://github.com/nextstrain/docker-base#rebuilding-an-image-and-pushing-to-docker-hub). [signed]: https://git-scm.com/book/en/v2/Git-Tools-Signing-Your-Work [a PyPi account]: https://pypi.org/account/register/ [twine]: https://pypi.org/project/twine [docker-base]: https://github.com/nextstrain/docker-base ### Maintaining Bioconda package Bioconda hosts [augur’s conda package](http://bioconda.github.io/recipes/augur/README.html) and defines augur’s dependencies in [a conda recipe YAML file](https://github.com/bioconda/bioconda-recipes/blob/master/recipes/augur/meta.yaml). New releases on GitHub automatically trigger a new Bioconda release. To modify augur’s dependencies or other aspects of its conda environment, [follow Bioconda’s contributing guide](https://bioconda.github.io/contributor/index.html). You will need to update the existing recipe YAML locally and create a pull request on GitHub for testing and review. Add your GitHub username to the `recipe_maintainers` list, if this is your first time modifying the augur recipe. After a successful pull request review, Bioconda will automatically update the augur package that users download. ### Continuous Integration (CI) Branches and PRs are tested by GitHub Actions workflows configured in `.github/workflows`. Our CI GitHub Actions workflow is comprised of a _test_ job that runs tests and uploads the coverage report to Codecov. Currently, only `pytest` results are included in the report. ## Contributing documentation [Documentation](https://docs.nextstrain.org/projects/augur) is built using [Sphinx](http://sphinx-doc.org/) and hosted on [Read The Docs](https://readthedocs.org/). Versions of the documentation for each augur release and git branch are available and preserved. Read The Docs is updated automatically from commits and releases on GitHub. ### Doc Formats Documentation is mostly written as [reStructuredText](http://www.sphinx-doc.org/en/master/usage/restructuredtext/index.html) (.rst) files, but they can also be Markdown (.md) files. There are advantages to both formats: - reStructuredText enables python-generated text to fill your documentation as in the auto-importing of modules or usage of plugins like `sphinx-argparse` (see below). - Markdown is more intuitive to write and is widely used outside of python development. - If you don't need autogeneration of help documentation, then you may want to stick with writing Markdown. Sphinx, coupled with reStructuredText, can be tricky to learn. Here's a [subset of reStructuredText worth committing to memory](https://simonwillison.net/2018/Aug/25/restructuredtext/) to help you get started writing these files. Many Sphinx reStructuredText files contain a [directive](http://www.sphinx-doc.org/en/master/usage/restructuredtext/directives.html) to add relations between single files in the documentation known as a Table of Contents Tree ([TOC Tree](https://documentation.help/Sphinx/toctree.html)). Human-readable augur and augur subcommand documentation is written using a Sphinx extension called [sphinx-argparse](https://sphinx-argparse.readthedocs.io/en/latest/index.html). ### Folder structure The documentation source-files are located in `./docs`, with `./docs/index.rst` being the main entry point. Each subsection of the documentation is a subdirectory inside `./docs`. For instance, the tutorials are all found in `./docs/tutorials` and are included in the documentation website via the directive in `./docs/index.rst`. ### Building documentation Building the documentation locally is useful to test changes. First, make sure you have the development dependencies of augur installed: ```bash pip install -e '.[dev]' ``` This installs packages listed in the `dev` section of `extras_require` in _setup.py_, as well as augur's dependencies as necessary. Sphinx and make are used when **building** documentation. Here are some examples that you may find useful: Build the HTML output format by running: ```bash make -C docs html ``` To monitor the source files for changes and automatically rebuild as necessary, run: ```bash make -C docs livehtml ``` Sphinx can build other formats, such as epub. To see other available formats, run: ```bash make -C docs help ``` To update the API documentation after adding or removing an augur submodule, autogenerate a new API file as follows. ```bash sphinx-apidoc -T -f -MeT -o docs/api augur ``` To make doc rebuilds faster, Sphinx caches built documentation by default, which is generally great, but can cause the sidebar of pages to be stale. You can clean out the cache with: ```bash make -C docs clean ``` To **view** the generated documentation in your browser, Mac users should run: ```bash open docs/_build/html/index.html ``` Linux users can **view** the docs by running: ```bash xdg-open docs/_build/html/index.html ``` This will open your browser for you to see and read your work. augur-24.2.2/docs/examples/000077500000000000000000000000001456376326500155135ustar00rootroot00000000000000augur-24.2.2/docs/examples/examples.rst000066400000000000000000000065671456376326500201010ustar00rootroot00000000000000============================= Examples of Augur in the wild ============================= We really enjoy hearing about people using Augur. If you use Augur to do your work, we'd love to add it to this page! Let us know about it by `opening an issue `__ or `submitting a PR `__. Nextstrain pathogens ==================== All pathogens on `Nextstrain `__ currently use Augur to go from raw data to `Auspice `__-ready results files by performing cleanup, subsampling, alignment, tree building, and ancestral state reconstruction. Each pathogen has its own build repository on `GitHub `__ which uses `Snakemake `__ to define and run the pipeline of Augur commands. ============================================================= ======================================================================================= Pathogen (link to Nextstrain) GitHub repository ============================================================= ======================================================================================= `Seasonal influenza `__ `nextstrain/seasonal-flu `__ `West Nile Virus `__ `nextstrain/WNV `__ `Lassa `__ `nextstrain/lassa `__ `Mumps `__ `nextstrain/mumps `__ `Zika `__ `nextstrain/zika `__ `Ebola `__ `nextstrain/ebola `__ `Dengue `__ `nextstrain/dengue `__ `Avian influenza `__ `nextstrain/avian-flu `__ `Measles `__ `nextstrain/measles `__ `Enterovirus D68 `__ `neherlab/enterovirus_nextstrain `__ `Tuberculosis `__ `nextstrain/tb `__ ============================================================= ======================================================================================= You can download a copy of a build repository, inspect the Augur commands used, and try running it locally yourself. This can be useful to reproduce the analysis or tweak it for your own needs and data. Nextstrain community ==================== Nextstrain also provides access to analyses by independent groups `stored and accessed via public GitHub repos `__, all of which currently use augur. For the most up-to-date listing of these please see the `community section on the nextstrain front page. `__ augur-24.2.2/docs/faq/000077500000000000000000000000001456376326500144445ustar00rootroot00000000000000augur-24.2.2/docs/faq/clades.md000066400000000000000000000040571456376326500162270ustar00rootroot00000000000000# Labeling `clades` Clades in phylogenetic trees are often named to facilitate discussion of genetic diversity, see for example [seasonal influenza on nextstrain](https://nextstrain.org/flu). Augur has a command to determine the position of such clade labels and assign sequences to clades. The definition of these clades are provided in a tab-delimited file (tsv) using the following format: ``` clade gene site alt 3b HA1 145 S 3b HA1 312 S 3b nuc 1671 G 3c HA1 48 I 3c HA1 45 N 3c nuc 456 T 3c2 HA2 160 N 3c2 nuc 693 A ``` Each line specifies a sequence feature of a clade. The first column specified the name of the clade to which the feature belongs, the column `gene` can be any annotated gene or the underlying nucleotide sequence (`nuc`), the column `site` specifies the position (numbering starting at 1), while the column `alt` specified the state. A clade if often defined by multiple such sequence features. The augur command `clades` can be used to annotate such clades in your tree and a rule in a Snakefile would look this ```bash rule clades: input: tree = rules.refine.output.tree, aa_muts = rules.translate.output.aa_data, nuc_muts = rules.ancestral.output.nt_data, clades = "config/clades.tsv" output: clade_data = "results/clades.json" shell: """ augur clades --tree {input.tree} \ --mutations {input.nuc_muts} {input.aa_muts} \ --clades {input.clades} \ --output-node-data {output.clade_data} """ ``` As input, this command requires the tree, the output of the ancestral reconstruction steps and the translation step (assuming your clades are defined using translations), as well as the file with clade definitions. The output of this command is a json file in the common augur format that specifies `clade_membership` for each node in the tree. Nodes that didn't match any clade definition will be left unassigned. Internal nodes that form the root of each clade will also have a branch label assigned (you can prevent this by adding `--label-name none`). augur-24.2.2/docs/faq/colors.md000066400000000000000000000045151456376326500162740ustar00rootroot00000000000000# Adding Custom Trait Colors Auspice uses a number of default color schemes to color the tree using meta data or values that the augur pipeline computed. In some cases these defaults are not suitable for particular type of data, and you'd like to use your own color schemes. To specify a mapping between discrete trait values and colors, you can pass a tab-delimited file to `augur export`/`augur export v1`/`augur export v2` using `--colors`. > _Note that it's not currently possible to specify color schemes for nucleotides, amino acids, or continuous data._ ### Format The file should contain 3 columns separated by tab characters. The first columns specifies the trait (e.g. country, host, ...), the second columns specifies the value of the trait, and the third the associated color in hexadecimal notation. Example: ``` country thailand #511EA8 country vietnam #4928B4 country singapore #4334BF country french polynesia #4041C7 country american samoa #3F50CC country fiji #3F5ED0 ``` The hexadecimal notation starts with a #, followed by two letters coding for red, green, blue values. If you need advice or inspiration for colors, have a look at [colorbrewer](http://colorbrewer2.org/#type=sequential&scheme=BuGn&n=3). Pay particular not to mix tabs and spaces for column separation. The line ``` country american samoa #3F50CC ``` for example has a tab between "country" and "american samoa" while "american" and "samoa" are separated by a space (because that happens to be the how this place is called). "samoa" and "#3F50CC" are again separted by a tab. Augur matches geographic location in lower case, so the casing doesn't matter. Beyond that, make sure your trait (e.g. 'country') and the values (e.g. 'thailand') exactly match what's in your metadata! ### Ordering Another reason you may want to use colors is to preserve ordering of your values. For example, if you have a trait `age_range` with values `<18`, `18-30`, `31-65` and `>65`, you'd probably like them to appear in this order in the filter and legend. By default, auspice would sort these alphabetically, so you'll get them in a strange order. However, if you specify the order by assigning colors, the order will be preserved in auspice: ``` age_range <18 #511EA8 age_range 18-30 #4928B4 age_range 31-65 #4334BF age_range >65 #4041C7 ``` augur-24.2.2/docs/faq/faq.rst000066400000000000000000000006411456376326500157460ustar00rootroot00000000000000========================== Frequently Asked Questions ========================== Got questions? Hopefully, we've got answers! Here, we've gathered up some of the most common questions and problems users run into. .. toctree:: :maxdepth: 1 :glob: what-is-a-build metadata clades Specifying `refine` rates Creating a tree using your own tree builder augur-24.2.2/docs/faq/fasta_input.md000066400000000000000000000007361456376326500173110ustar00rootroot00000000000000# Using Fasta Input If you would like to run augur on viral data, or bacterial SNP data, you probably would like to start with Fasta sequence data. ### Sequence data Your sequence data should * consist of homologous sequences that can be aligned unambiguously * needs to contain sufficient diversity to allow reliable tree reconstruction * should be of similar length. Mixing short sequences (300bp) with much longer ones (10000bp) often yields unexpected results.augur-24.2.2/docs/faq/import-beast.md000066400000000000000000000077501456376326500174050ustar00rootroot00000000000000## Importing BEAST MCC trees into augur This documentation details how to import BEAST MCC trees using `augur import beast`. Currently this is most useful for producing auspice-compatable output using `augur export`, however in the future we will provide instructions on how to perform additional analysis using other augur tools. > BEAST 1 & 2 are extremely versitile tools. We have tested augur on a number of BEAST runs, using both BEAST & BEAST 2, however there may be issues with your particular run. Please [get in touch](mailto:hello@nextstrain.org) if you encounter any issues. ### Steps 1. Parse the BEAST tree using `augur import beast`. Most of the options are explained below, but run with `--help` to see them all. This produces a newick tree file and a node-data JSON file containing BEAST traits as well as (temporal) branch lengths. 2. It may be necessary to modify the format of the traits written to the node-data JSON. These are extracted directly from the BEAST-created annotations in the NEXUS file. For example, if you have encoded location or host as integers, then you should map these back to their true values now. 3. Create an `auspice-config.json` file, which is needed for various display options in auspice. A template is provided as terminal output from step (1), however there is not enough information in the MCC tree to do this automatically. Pay particular attention to the color-variable types, which can either be "continuous" or "discrete". 4. Extra metadata can be included here -- either as an additional node-data JSON file, or in TSV format. Any additional metadata must be both specified in the `auspice-config.json` file and provided to `augur export`. 5. Export auspice-compatible JSONs using `augur export`. A basic example of what options to supply to this command is provided as terminal output from step (1). ### Taxa naming The BEAST MCC tree, in NEXUS format, may have `Taxlabels` encoded as integers or strings -- the latter is normally accompanied by a `Translate` block mapping tip names to integers which are used in the actual tree block. ### Calculating the root date BEAST trees are dated in "time units" from the root date. Helpfully for us, the sample-date is often encoded in the tip name -- for instance they may follow the format `sample_name|accession|host_name|YYYY-MM-DD` -- and we typically utilise this to calculate the root date. If the dates are not encoded in the tip names, or no tip-names are used, then you will need to provide the date of the most recent tip (in decimal format) via the `--most-recent-tip-date` argument. If the dates are provided in the tip names, then we use a regex to extract this (`--tip-date-regex`, the default finds "YYYY-MM-DD" at the end of the tip name). The date format may also be specified if needed via `--tip-date-format`, which is interpreted by the python datetime module, [see here](https://docs.python.org/3/library/datetime.html#strftime-strptime-behavior) for help with these formats. ### BEAST inferred traits These are all extracted and stored in the node-data JSON. The terminal output will list the tratis found, e.g.: ``` Parsed BEAST traits: name n(internal) n(terminal) type 273 274 type_confidence 273 274 height 273 274 height_median 273 272 height_confidence 273 272 posterior 273 0 ``` ### Examples ``` augur import beast --mcc data/MERS_CoV_mcc.tree --output-tree results/mers.new --output-node-data results/beast_data.json augur export v1 --tree results/mers.new --node-data results/beast_data.json --auspice-config config/auspice_config.json --output-tree auspice/mers_tree.json --output-meta auspice/mers_meta.json ``` ``` augur import beast --mcc data/beast.mcc.nex --output-tree results/mers.new --output-node-data results/beast_data.json --most-recent-tip-date 2018.43 ``` A full [example build can be found here](https://github.com/nextstrain/augur/tree/master/tests/builds/beast_mers). augur-24.2.2/docs/faq/lat_longs.md000066400000000000000000000033531456376326500167540ustar00rootroot00000000000000# Adding Custom Lat-Long Data To place sequences on a map, auspice needs to know where the locations you specify are on the globe. These coordinates are provided by augur and augur has preset coordinates for many places. For example, for `region`, `country`, and some `division`s augur already knows many lat-long coordinates (see which ones it already knows by checking the list [here](https://github.com/nextstrain/augur/blob/master/augur/data/lat_longs.tsv)). Some places, however, are inevitably missing and you need to tell augur the latitudes and longitude of all locations not covered by defaults. The file for latitude and longitude needs to be a tab-delimited table with four columns: ``` country brazil -10.3333332 -53.1999999 country colombia 2.893108 -73.7845142 country dominican republic 18.50012 -69.98857 country ecuador -1.3397667 -79.3666964 country french polynesia -17.6797 -149.4068 country guatemala 15.6356088 -89.8988086 [...] ``` The first columns specifies the type of location (country, city, region, ...) corresponding to a field in your meta data. The second is the actual name of the location, while the third and fourth columns are latitude and longitude. Note that multipart country names like "Dominican Republic" can contain a space because the delimiter of difference columns are tabs. Augur matches geographic location in lower case, so the casing doesn't matter. Beyond that, make sure your trait (e.g. 'country') and the values (e.g. 'brazil') exactly match what's in your metadata! You can add geographic lat-long data at as many resolutions as you like - just ensure you give each different names ('country', 'region', 'state', 'location', 'city') and that these match columns in your metadata file. augur-24.2.2/docs/faq/metadata.rst000066400000000000000000000103371456376326500167620ustar00rootroot00000000000000Preparing Your Metadata ======================= Analyses are vastly more interesting if the sequences or samples analyzed have rich 'meta data' wherever possible. This metadata could typically include collection dates, geographic location, symptoms of patients, host characteristics, etc. To make the most of augur's features, we recommend including sampling date and at least one type of geographic information if at all possible. However, you can also include things like symptoms, host, clinical outcome - and more! For augur to be able to parse this data, it needs to be formated consistently. Your data may have meta information coded into the sequence name (see example :ref:`below`). If not, a very transparent way is to provide the meta data as a separate table in a tab- or comma-separated file. An example meta data file is shown here: :: strain accession date region host 1_0087_PF KX447509 2013-12-XX Oceania Human 1_0181_PF KX447512 2013-12-XX Oceania Bat 1_0199_PF KX447519 2013-11-XX Oceania Human BRA/2016 KY785433 2016-04-08 South America Cow BRA/2015 KY558989 2015-02-23 South America Bat A note on Excel ~~~~~~~~~~~~~~~ Because Excel will automatically change the date formatting, we recommend *not* opening or preparing your meta data file in Excel. If the metadata is already in Excel, or you decide to prepare it in Excel, we recommend using another program to correct the dates afterwards (and don't open it in Excel again!). Format ~~~~~~ **Strain names** You must have one column named ``strain`` or ``name``. It contains your sequence names, and needs to match the identifiers of your sequences (in the Fasta or VCF file) *exactly* and must not contain characters such as spaces, or ``()[]{}|#><``. **Dates** Dates should be formated according as ``YYYY-MM-DD``. You can specify unknown dates or month by replacing the respected values by ``XX`` (ex: ``2013-01-XX`` or ``2011-XX-XX``) and completely unknown dates can be shown with ``20XX-XX-XX`` (which does not restrict the sequence to being in the 21st century - they could be earlier). **Geography** Geographic locations can be broken down, for example, into ``region``, ``country``, ``division`` or ``city``. You can have as many levels of geographic information as you wish. For ``region``, ``country``, and some ``division``\ s augur already knows many lat-long coordinates (see which ones it already knows by checking the list `here `__). It is important that these are spelled consistently. If you want to include locations where augur doesn't know the lat-long values, you can include them - see how :doc:`here `. Consistancy and Style ~~~~~~~~~~~~~~~~~~~~~ Check that your metadata is free from spelling mistakes and that values are consistant. Augur doesn't know that 'UK' and 'United Kingdom' or 'cat' and 'feline' are the same! Previously, auspice 'prettified' traits by capitalizing them automatically, and removing the underscores that separated two-word locations ('new_zealand' became 'New Zealand'). Auspice will still do this if you are exporting 'V1' type JSON files (from augur v5 or augur v6 using ``export v1``), but will not do this if you are using ``export v2`` (`read more <../releases/migrating-v5-v6.html#prettifying-metadata-fields>`__). Instead, you should update your metadata files so that traits look the same as you'd like them to display in Auspice (change 'new_zealand' to 'New Zealand' in your metadata, and in any additional latitude-longitude or coloring files you use). .. _parsing-from-the-header: Parsing from the header ~~~~~~~~~~~~~~~~~~~~~~~ Sometimes, metadata can be coded into the Fasta header, like so: :: >1_0087_PF | KX447509 | 2013-12-XX | oceania ACTCGCTGCATCG... Augur can parse meta data from Fasta headers using the ``parse`` function (see :doc:`here `), but you have to make sure that every sequence has the exact same meta data fields (even if empty), and that they are consistently delimited with ``|``. Furthermore, none of the metadata fields can contain the character ``|``. augur-24.2.2/docs/faq/refine.rst000077700000000000000000000000001456376326500225312../usage/cli/refine.rstustar00rootroot00000000000000augur-24.2.2/docs/faq/seq_traits.md000066400000000000000000000072341456376326500171520ustar00rootroot00000000000000# Inferring Sequence Traits (like Drug Resistance) Unfortunately this method currently only works with VCF-input files. It will be updated to work with Fasta-input soon! The augur function `sequence-traits` can identify any trait associated with particular nucleotide or amino-acid mutations, but it's often used to identify drug resistance mutations (DRMs). To tell augur which sites confer what trait (or drug resistance), you'll need to pass a file detailing these sites. The file should usually contain five columns: GENE, SITE, ALT, DISPLAY_NAME, and FEATURE. DISPLAY_NAME can be blank, and the GENE column can be omitted if only nucleotide locations are used. ### Amino Acid Sites For example, for drug resistance in TB, we list the gene, the AA position in the gene, the AA mutation that confers resistance (you can list a site multiple times if multiple bases give resistance), and the name of the drug this mutation gives resistance to: ``` GENE SITE ALT DISPLAY_NAME FEATURE gyrB 461 N Fluoroquinolones gyrB 499 D Fluoroquinolones rpoB 432 E Rifampicin rpoB 432 K Rifampicin ``` We can leave DISPLAY_NAME blank, as auspice will by default display the gene, site, and original and alternative base. ### Nucleotide Sites For mutations outside of protein-coding genes, we can specify their position using nucleotides, and specify how we'd like them to be named when displayed: ``` GENE SITE ALT DISPLAY_NAME FEATURE nuc 1472749 A rrs: C904A Streptomycin nuc 1473246 G rrs: A1401G Amikacin Capreomycin Kanamycin nuc 1673423 T fabG1: G-17T Isoniazid Ethionamide nuc 1673425 T fabG1: C-15T Isoniazid Ethionamide ``` In the TB literature, these mutations are still referred to by their position within non-protein-coding genes (`rrs`) or location near genes (`-17 fabG1`), not their nucleotide location. We can ensure auspice displays the more useful common nomenclature by giving entries for the DISPLAY_NAME column. If you are only using nucleotide sites, you can also omit the GENE column: ``` SITE ALT DISPLAY_NAME FEATURE 1472749 A rrs: C904A Streptomycin 1473246 G rrs: A1401G Amikacin Capreomycin Kanamycin ``` ### Both Nucleotide Sites and AA Sites You can also mix sites identified by nucleotide position and those identified by AA position: ``` GENE SITE ALT DISPLAY_NAME FEATURE gyrB 461 N Fluoroquinolones gyrB 499 D Fluoroquinolones rpoB 432 E Rifampicin rpoB 432 K Rifampicin nuc 1472749 A rrs: C904A Streptomycin nuc 1473246 G rrs: A1401G Amikacin Capreomycin Kanamycin nuc 1673423 T fabG1: G-17T Isoniazid Ethionamide nuc 1673425 T fabG1: C-15T Isoniazid Ethionamide ``` ### Options `sequence-traits` will return a value for each "feature" - for example, all the mutations on the tree that lead to resistance to Streptomycin. It will also generate a count either of the total number of "features" each node has (ex: the total number of drugs a sequence is resistant to), or the total number or mutations specified in the file each node has (ex: the total number of DRMs a sequence has, even if some are for the same drug). You can specify a name for this count using the `--label` argument (ex: "Drug_Resistance"). The `--count` argument value specifies whether to count the number of traits (ex: drugs resistant to) (use `traits`) or number of overall mutations (use `mutations`). augur-24.2.2/docs/faq/skip_augur_tree.rst000066400000000000000000000046741456376326500204010ustar00rootroot00000000000000=========================================== Creating a tree using your own tree builder =========================================== The `augur tree` command is a light wrapper around tree building programs such as IQ-TREE, RAxML and FastTree. It's possible that the functionality you want isn't available in those programs, or that it is available but that `augur tree` doesn't expose the functionality you need. The solution is just to use your own tree building program directly. This guide explains the general approach you can use. Exclude sites ------------- Augur tree allows you to mask certain problematic sites before tree-building via `augur tree --exclude-sites --alignment ` , where each line in `` is a 1-based nucleotide position to mask from the alignment. We can recreate this via the following command: .. code-block:: bash augur mask --sequences --mask --output If you use this, remember to use the `` file for tree building, not the input `` file! Build your tree --------------- This is up to you! The end result should be a newick tree file with branch lengths representing nucleotide divergence (or similar). In a typical nextstrain workflow, this file will be handed to `augur refine` for temporal inference (see below if you also want to skip this step). Note that augur refine may change the tree structure in two ways: * Rerooting (avoid via `augur refine --keep-root`) * Resolving polytomies using temporal information (avoid via `augur refine --keep-polytomies`) There are some gotchas involved in tree building, such as: * IQ-TREE will change taxon names if they include any of the following characters: `/|()*`. This will result in the tree and alignment falling out of sync. Other tree builders may have similar behavior. * Bootstrap values are allowed, and should be parsed correctly by `augur refine`. Avoiding augur refine --------------------- While augur refine is typically used to reroot the tree and infer the times of internal nodes, it also performs two important tasks which subsequent augur commands expect: * Labels internal node names. These are typically in the format `NODE_0000001`, but this is not required. * Stores branch lengths already present in the newick tree as a node-data JSON file, which `augur export` uses. If you can address both of these then you can easily skip the `augur refine` step. augur-24.2.2/docs/faq/translate_ref.md000066400000000000000000000056171456376326500176300ustar00rootroot00000000000000# Finding a `translate` and `align` reference file In order to correctly align and annotate the genes in your sequences, augur uses an annotated reference sequence in 'Genbank' format (if Fasta input) or 'GFF' format (if VCF input). You should find an appropriate reference file that corresponds to your sequence data. For Fasta input, you'll then use this sequence for the `align` step and the `translate` step. (It's important you use it for both so that the numbering is consistent.) ### Finding the right sequence You can look for a reference sequence on Genbank. It should: * Include all the genes you wish to annotate (as individual annotations) * Be approximately the same length as your sequence (Fasta-input) * Not be too divergent from your sequence (or it may have trouble aligning) (Fasta-input) * Use the same numbering as the reference your VCF is mapped to (VCF-input) For example, in our Zika build we use the reference sequence [PF13/251013-18](https://www.ncbi.nlm.nih.gov/nuccore/KX369547). Since we have full-genome Zika samples, it was important we choose a reference that is also full-genome in length. If you have partial-genome sequences, you should look for a reference that covers the same region you have. ### Fasta You can download a reference sequence you find on Genbank by using the 'send to' link in the top-right corner and then selecting 'Complete Record', 'File', and 'GenBank' as the format. You'll then need to modify the Genbank file. We recommend not translating things like 'polyproteins' which contain many genes, and instead translating individual genes. Remove any genes/CDS which you do not want to translate. It is important you leave the `source` information. Augur will only translate genes which have 'CDS' as the feature name, and have an attribute called 'gene' or 'locus_tag'. You may have to modify your Genbank file so that it's in the correct format. Here's an example: ``` CDS 961..2472 /product="envelope protein" /gene="ENV" ``` Compare the [original Zika reference on Genbank](https://www.ncbi.nlm.nih.gov/nuccore/KX369547) to the [one used on Nextstrain](https://github.com/nextstrain/zika/blob/master/config/zika_reference.gb). Notice that the genes are designated by `CDS` instead of `mat_peptide` and have an entry for `/gene=` as well as `/product=`. ### VCF You can also find an appropriate GFF annotation reference on GenBank. Be sure to pick one that is very close to the strain you are using - especially if there might be variability in the genes present! If the positions in the GFF file do not match the positions in your VCF file, it will not work. To download a file from GenBank, use the 'send to' button in the top-right corner, then select 'Complete Record', 'File', and 'GFF3' for the format. You will have to modify the first column of the GFF so that it matches the `CHROM` (first column) of your VCF file.augur-24.2.2/docs/faq/vcf_input.md000066400000000000000000000041261456376326500167660ustar00rootroot00000000000000# Using VCF Input If you would like to run augur on whole-genome bacterial data, you probably would like to start with VCF sequence data. (Note that if you have bacterial SNP data, this may be in Fasta format.) ### Format All of your samples should be combined into one VCF file, where each sample has its own column. As always, it's crucial that the sequence names in your VCF file (at the top of each column) match the sequence names in your meta data file. The VCF file can be uncompressed (ending in `.vcf`) or compressed (ending in `.vcf.gz`). _When combining multiple VCF files, double-check that the column names remain the same! Many programs change them when combining. If they do not match the names given in your metadata file, it will not work!_ ### Reference file You will also need the reference sequence to which your VCF file maps. This is a Fasta file that contains one full-length genome with positions that correspond to the positions in your VCF file. ### Masking sites _(Optional)_ If you have areas of your genome that you would like to exclude from analysis (perhaps because they are repetitive or recombinant), you can provide a file in BED format which lists regions to 'mask' (exclude), and run the `augur mask` function. An example of this format is below. It does not matter what is in the `Chrom`, `locus tag` or `Comment` fields. ``` Chrom ChromStart ChromEnd locus tag Comment NC_000962 23182 23269 IG18_Rv0018c-Rv0019c NC_000962 33582 33794 Rv0031 remnant of A transposase NC_000962 80194 80623 IG71_Rv0071-Rv0072 ``` ### Restricting Gene Translation _(Optional)_ Bacteria can have thousands of genes, and translating all of them can take quite a bit of time. If you wouldn't like to translate all of them, you can provide a list of genes that you'd like to include in the analysis, and only these will be processed. For example, you might include a list of genes that are associated with drug-resistance. To do this, simply create a file with a list of the genes you'd like to include, with one gene name per line. You can then pass this to `augur translate`.augur-24.2.2/docs/faq/what-is-a-build.md000066400000000000000000000037641456376326500176670ustar00rootroot00000000000000# The concept of a 'build' Nextstrain's focus on providing a _real-time_ snapshot of evolving pathogen populations necessitates a reproducible analysis that can be rerun when new sequences are available. The individual steps necessary to repeat analysis together comprise a "build". Because no two datasets or pathogens are the same, we build Augur to be flexible and suitable for different analyses. The individual Augur commands are composable, and can be mixed and matched with other scripts as needed. These steps, taken together, are what we refer to as a "build". ### Example build The [Zika virus tutorial](https://docs.nextstrain.org/en/latest/tutorials/zika.html#build-steps) describes a build which contains the following steps: 1. Prepare pathogen sequences and metadata 2. Align sequences 3. Construct a phylogeny from aligned sequences 4. Annotate the phylogeny with inferred ancestral pathogen dates, sequences, and traits 5. Export the annotated phylogeny and corresponding metadata into auspice-readable format and each of these can be run via a separate `augur` command. If you look at the [other tutorials](https://docs.nextstrain.org/en/latest/tutorials/index.html), each one uses a slightly different combination of `augur` commands depending on the pathogen. ### Snakemake While it is possible to run a build by running each of the individual steps, we typically group these together into a make-type file. [Snakemake](https://snakemake.readthedocs.io/en/stable/index.html) is "a tool to create reproducible and scalable data analyses... via a human-readable, Python-based language." > Snakemake is installed as part of the [conda environment](https://docs.nextstrain.org/en/latest/guides/install/local-installation.html#install-augur-auspice-with-conda) or the [docker container](https://docs.nextstrain.org/en/latest/guides/install/cli-install.html). If you ever see a build which has a "Snakefile" then you can run this by typing `snakemake --cores 1` or `nextstrain build --cpus 1 .`, respectively. augur-24.2.2/docs/figures/000077500000000000000000000000001456376326500153415ustar00rootroot00000000000000augur-24.2.2/docs/figures/augur_analysis_sketch.png000066400000000000000000002406721456376326500224510ustar00rootroot00000000000000PNG  IHDR E"sBIT|d pHYs.#.#x?vtEXtSoftwarewww.inkscape.org< IDATxw$e]DEA (19c89JRp"A%(Q%i?wk~/NOl~@$I$Y@r]}&aj4&{_%I$I$Ik $I$IԸMC$I$I42$I$I~π)M"I$I$I[ J$I$I#ssvo51`Zmw5P$Iܶc "I$IҘfT$I$I9kMjm{4+N` PxvrH*[)b`j$I$iL3d*I$I$#r?W4P$I$I$i1d*I$I۶B$um`ܶ1`*I$I$IdT$I$U1tzbĶG I*pcnu "I$I!SI$I$?Il{ԫ sf5Q$I$I..@$I$IR#R'F I$IemH0hE$IZT$Ie"<J!(f.j"I['d/liCyVT3hl9F+$I$I$Ixބ#:V5B%w&6!)D`N]Vt/ XXlDX+ަ5.<xv!]UXDt_C7h;AGR5;!5zx_!SCس=YV46Z뿲H',H$ Zw$I$IzKt*#_NOBtrM-=Qbʼn}x5qCkP<8::?>u¢{_DvӃVV~^msk;Թ[WC,*+5(p7%p10m+lI;aClLJć:fa{cF\>HN|\+$I$Im2G$I${_a눥e~?Xyoj :WGX {*v1-Wc&PPXsDXG`uIJ^GV~Bu'KªO/pL"s틉n@g Ӯ?xޒ7UnjDg%~OE_]nfxXwYt6]>+|⾸/᦬ ẃgZ| X/wc'NYO0.om;t. M#x|(c;p{GŐGrFI[޴]c#sG'}Ku']߽\n-/o/ya.Ϲ7ϗU84Ra5k˻8͈m.Ω0F]%>Se-J$I$I$I$I*Q T58ȯ0άוwjb23蕉AN6?{9d-$]/dmOd Gw2ҁW | | m ^~*ܦD bMٙdǸrbK웽_$^L&%jrub+?Fcku|ۇj'O&kev,~]b[){;B.|Y⸩Vk*V&o]֥'O,{Kc]7r^x4;܎D'* [eL Nܸb {޶=5MT@sB˙TzKnϬeEwU1^%_vzXOOgS|-;_mH~:ъYbW6Zr$M$I$I$IQ5wCYMLO컘5h&d:tyj1%OL.S> VMDc=E/- n.o*d:t֝&̞_F?!n絣B };{a$BӉyu}˺4652Gf`6de75,^E h262?2ؿ{vA*}S\ !J qŒj ctv$ǐ$I$I$Il"dpSS!%=Y/N3t6d%m2jAY u&N!xWg:1Vg3T6]b)ב'd ?O_ϣ,HL{apz% h*d*[[qC} B˿CT{9] .ډ* &=Gek]%l}'yZpLqfSک|!=Hwؒ3dZ!ӥۑC$qU$I$Icbv!lFEUU->Pc' d}#Ӊde2wX66o*?Y{%QD NYSz뫉me:2= m^_>DI]xokg~xڋ<: ",~K,],`&l" :8{U gW'R2xLFֲ&vPHS.H=7~C|6ڣdϣ}=K+Ln[ծU ,~ q<4C"^얱8hDl1z[wS6C<iنj v}+B1ql K-I$IƇv x JlzY 58~W$u@\|~o+,sJl;1|1m9x_YėnYQʹ:eXb|kbGzSָt1Ŏ;h3K3^yceGtHEb9D 40}xKy`'pC~'56 :>47;d~7i2."ދ :] Dt _!w!ℐl}K"P}aE :sPHL%BP9_ Z:mG1PӈDxzsOhʛ@*pqՇ!V襩ˀWcm\r1VaÉ,D1oCʝw} ݀%>OM\o>qeIUOT+c]Z-M4=l73&D:Zxn]B7^IP C<<&-u]Hw]F|f#,ynΔ"v&ˡDMiJCͫ#hqݕr_x2J!KI$I$IZⲱeXJ9Zٰľ7~G'ID %m{/q}nCLYy]0u"M]{(>ޟ~?I]u7ҭH3^'sS& °e= Fqe[]ns'D^JLc/’uuΫp}"-y1$*Ϫy ]ޯb+)ߍլ7l㼈Xi SZ=A;ӈ0}~-{0$I*?z%I$I&6;ߙtr|1CTsF.O]$i/, v'صS~WKӗR\_DכnluFcO":Gkw~>Qf^;8 "h)"Tu0L":wcGO38'~UvnJlwIO9g\YDQeT$IL&<|9݇DrtĶNNFoCv㹟QnyהNK˶Zcz^bSJN~et^tZZNeݠ!큟ݖ.&0/˒BWt_]xۧRyݦskn [zG긅KĮNSsn=F,^)[2{a6h۩ /$݁bی;]jD| l>wI$Ivhc/a6#:>NZ}_xM Q"$ߪqh0}xOZ'1B :HѭȴD YpMq:l9xߙFt^MRTT;D"̚o 3um't1$I$I$I؞XWKAvMJ˩/Q7@ʣ]Z%UC/$ܒkuBc]m |6t:#O{,?%m!7ڏl1 zKYo0׺)[љm-hݡ _%ąVg1/&N:O:IAte͛K&O~?׶"Nxۛj YWe'tطՉ$k$I$I$iz|g%-ľZ$I-?^ua%&o b$+u~Y.N9r:uPbz~}SvrHbK^w.j饷QؚcI|!=w^ύ_R.Kc[*KzPƮ)>W`ܹqvP[n["Ԕ]Pe ӈRv˺)ޞCj5-1M%hb|6u?l3>98F'%͆S_H׹̩s#;]H1w(q]~O7`c@cmDc<rǞOc_U9b.{ջ3 ܛtH1@偟r^Z~J<^`e;ӀϷ8Y+o}D]ݙ뺞?TudOۡй[q4=)qT8F7&HNm+q"˿_KWD?j+_輂W'x43DȲl@r"mbv\Rr^.cxpqcϚy>iW'{b;;yx?|/N.ƾW]kGt9Cv^y1rwq&~|'J_1!: XcI%C$I$\=DSe T:ҤrMjԗח^{U4J&ߤ0|],ZףD7_ ?sD'a-]n #~IpD/:JVsfn֪zLjrЮЃ1Hk' tF@l۝0D'ϐ2?wP| pqʽSDly(`4ѕd3m3: ;ށf⤝|}42M-!^ōDH{meS^J|˚Ot f8qv{r_i֧pNm;ornՃ&N:2]'#xyDg hUlK#I4 J$I4z`x+/v"bY@60 C.|eMQ&Zzl Ηw]QXD*B.{^6' yXt4dXU60W7@H.wZgjl#PT5ĉUyuOZ@,_f۪|{}pˇy"Tȴ .D06(տ>M3q+;[wF݊!WQ\: UVq _&m9fN"ٶs}ߔ-V7Tzm8!Sɐi/KL k?Zz%M7S։O9XTӓ׭V$uit<$I$iib;0t׮,Ud.vV u).^v,`JZyDW5.[$;tzx0#4~P~(.yDWĬKXH$ɷ踷ـl]xnf'N$I 1d*I$IHuyvb[ocl|AWŭoqe" *d!݉n~9cBJ^șhbЪaӃhvݩt/\VXbgMg*|35C|&5PER ɒi^7wkfAt1Lc=DW^89qrאU >t߉PK {=V'!By?YC;M ;hzxo*x_v_#NNh|7IV|3!r~s>݅NOEutbGs"I2U$I$IR#Τ f HKu|!Hb|: Tht(Xle>kh)vdzV. >۾^cihS+nzkWtSꆈ祪.g{CS*#DчK\w~ x30qB[ĿĶj_$!SI$IFϥm]1xr&ťO! j?\n`QnjDX#+kac4!:|e_r`c֑>I*4}+k]mv?+rH߶cZ mSTcG%ϻPմˈN~8~6;1WUwaCO%'3Nlz ;8ʒ{!!۽ܛDu󁣉iY'fܕrdb ǔ$I#$I$I(vQ9d_]#^A|~"4Bw|kK뙟6X?T'7ˆ>sw$:]F<'b S򈹇v$t[z"l_6x7Vt"s'Bt-|f}xťz9"~-9?!Ns?mDln /by{e#yu'>ǒ$I$I$i kz*5JZ9ejbeG, }2^wc-N5Ԛc-oǘDt湞ıKg_Zf& 5Atɏql1 'ƪr9xT}-qgeq6J FFuyIDqv=:.ǛFuBBe:}=Qzyn?I\vp)ޖ)mh/~U#Ո{vr?/fIvU~b6JөDs=9֞N9*ϡ}ʆzmD-_{xy_H oMYى'•X79ʚu@xwZ=11[#` ; Po'Hw'!DH|3?N:#6<߉z+X{IeNRچ:V$ DضE?ãn[szO'j bM_O|*k(u0qQP8$i2$I$i,S˗7,kAtܑr#d9*nN|eSRYgKUXcgC|5^C#^{]U!/-"\Pr/L,XǽvGHeuu:/ݜr3yEu}_LWĶc勈c!4t&-q#$L;IpV^Oslg-K0XDX;VO:?ηI3Z$$⤉c {HcۍJNk-Zxnɷk3`]ضݮj3b;58LMФ^?x 8t+soZYKHqe)#IF2M I$IRNn@tۅXyE"\9X^KtL-U)×+ ~4?oPW/CKL!Dy!|}VD|G*OD8kn]Xue.r+y8 \\qPZ隻d7Seo_>F'}G 4W$7s֟{ubsc}eC`]e/]$>^I?݆%mS[W%B[aՈp|mDR}15IJfD;[w=+mR/G?Ds~G̅ ~1lL>6&:!_7sSDu61lA1"~_R۵Y-!_3<<8}nk :I6'/.uCR+_2բT˔?t3Z\c]vQ_U9xoP騊c&11^%IiLI$I:%I'Aj#.?蒙_Ƶ=kne=CqU*ɚ5 I@2eV8|%*KD.ﲷ cyDKߍ^>SU}CRs.joVz,UFKcS+gv}0]%61膘^E݈bx|^b!u).>@qX}_6Xs2}ubb)7%]dz!qLߜc>zk`Z&7%ƛþkQ ߦ >h"p<8d=Ql gTcM${<5!I$I$I!bp*/Ǝe$I2H뿷 ?M | PZِZrvRљ""tbb Nn(loVv`g"XA|ݩT&d:]m_@R?M:vb!Y'.l1!m蒺8xb[Iw5mnOgsl":s"t-1| kT=Y/q;b|I$I$I{䶲=UI$Ici BtHZbn/eC:*d ;P2rv& B,-X5|}pnB]˫Ut鼛1nC߫qʄLnwwty I4\C$I$5eEb )7K 'gc< Dt $I$շnxpwƜO뗉e9/5.  ^DPt+6X&j_)>Ntaؽ6E$L^lN܆eGn7"gGwW7 rg>hV۟%Dgq1\G: _5ui<+y27}.2=Ln VN(sr$BeE1\Yvzn#Dp6},Qc\\Nt)-e.q;$I$I$IXx/pZO;J$I$I$;J$I` e5s$i#\?K$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I$I&4]$I$I$I$I$IƆp-4d`Ӧ1bM!I$I$I$ID4)``2dQښs͖#I8?h5$I$I$I$%ӡAV$_-$0ɢ$!Sv0ɢ$I$I$I$IRy=YV$tDIRs8'hE$I$I$I$&:f +4Yu0@կH_į5Z$I$I$I$I;?`xCIWӀG>-Vm(Ijbω,J$I$I$I$(L/j"IDs;Hs99qF+$I$I$I$I}e  5,JRڇbF+漝F+$I$I$I$I}{ m"Ij>sM%I Yq`fEI$I$I$I@5V$}tlIRsΥ8'hE$I$I$I$L`شɢ$(G76Z$50s/H$I$I$I$/P 0dA-礭H1x|`&$I&6]$I$I$iTv0a $ĶCG IjMjI$I$I$In9pF+ԯ68 Lj(Ij(Ή6Z$I$I$I$I;`RIg8'dAԐ 4X$I$I$I$I3l2M%o}bۍV$I9V$I$I$I$IU {5Z~\`jEIRC^H3uV$I$I$I$Iλ)~hE%,H2✸yEI$I$I$Iy&ԷL1PuZIRs>CqNdI$I$I$IsAV$_-<)`&lA3?.$I$I$I$I g6Z~ sV$I͹✸sI$I$I$I2xᅧ9M%oL1Pu^IRs>LqNZI$I$I$IsHRc|Xɢ$!k>'Ln(I$I$I$I_2ъ$(Ih"Ij}H$I$I$I$ /,l(I}k+Hs 9GV$I$I$I$I)hʹ IDATE2} ,J20&$I$I$I$IeHR?;tlIRsΥ8'hE$I$I$I$L`بɢ$(G76Z$5ps/H$I$I$I$/R 0dAڭ-H1x|`&$I$I$I$Ie[ۀ M%o}F+JqN|KI$I$I$IsvV$_mLq>dQԐS/m"I$I$I$Iw>J1F+DqNڵъ$>.i&I$I$I$Ig# ý&Է>@1dF+|F+$I$I$I$I}*=HRZXh.0ɢ$!Rv]I$I$I$In4Z~v 9M$I AqNܼɢ$I$I$I$IRY X<`zEI[o:ъ$98'~ъ$I$I$I$IR߹bF+ԯf|0ɢ$![R˩$I$I$I$IҨx=ÙV$txIRs8'hE$I$I$I$dxxi`NEI[S ThEԜSo"I$I$I$IwΠ`8ъ$iъ$9ShE$I$I$I$|b& n8'mhEԌ +6Y$I$I$I$I/R t Lh(I}6Z$54sH$I$I$I$(k"Ij&xII$I$I$Is,HR_9iF+fLd|Xɢ$I$I$I$IRY,d ,JR ŐHmsH$I$I$I$(l"IjM`磹&J3ڟH$I$I$I$P 0|ъ$K(I/o IjI$I$I$I$Ձ /7YHYs'H$I$I$I$ )l"IjyiGO,J%h J$I$I$I$(h"IHWsNV$I$I$I$IlI4Yu@yV$I9x|I$I$I$Is&QV$_e|Xɢ$!k>',dQ$I$I$I$H1dzAIg'Qi"Ij}H$I$I$I$i /,l(I}k_HsIV$I$I$I$I(hE2},J2&$I$I$I$IeOHR?;F+GqN<ъ$I$I$I$Ic*ƏRP=fW)(҂ `EʫX_,`El4; "B"-:! ){~F/24$I$I$I$I,)- tu9'F$I9Ҝ\#$I$I$I$I6J ޒkD:z@/C˄~i=ڝy$I$I$I$I:ϧ)-`yIdQ5"IGxҜ8#Ϡ$I$I$I$IRgYah|`\AIX극F$I9F$I$I$I$I:?(-`x_IT G Jr5c$I$I$I$I(J .5"IϔrHs/9q\#$I$I$I$IeU`1C^&J .5"I)ijrH$I$I$I$uK)-`82׈$uBIiNeI$I$I$Is. 5"Ix(Ϡ$)'k J$I$I$I$u)-25׈$uP>kDQߟkD$I$I$I$(-`4Ϡ$u](G$g&9F$I$I$I$I:w)-`RIT(9i<,bh>\ gP$I$I$I$lOiAùF$}Ҝ\#\HiN<6׈$I$I$I$IRyrHRڂ|P3(IkrH$I$I$I$uS)-`8#π$u(I$c4"Ca/^AI$I$I$I2҂@WAIX'S~kDR?kD$I$I$I$Fi[rHRZЩop>zO:͞G#π$I$I$I$IR9Nv9i\#|')͉3 J$I$I$I$u/J ~kDoSkD$I$I$I$NhrAIRN=l 3(I$I$I$IY>Di%F$ҜtXIR~4'kD$I$I$I$ ,fhk<Ա\#BiN<+׈$I$I$I$IRǹ#sHR,dh>ZL3(I49y;Ϡ$I$I$I$IRg9"ӿ7pQ [RҜ\#LiN'׈$I$I$I$IRG chB/NXLR%RZPuc۰cKR>IiNe۰cK$I$I$I6u. j<;W5`\I#G7,CQQZNƕ ,ghN\o\[i$IjBH$I$IF&;/0J9zKE4&'@6KR^.ڷ y`bƕ$I$I$I$Im?M)I p)zs?)I$I$I$IF(-z8c EHpNiN:- !Ua:c2{=sFcJ$I$I$IAJ `_9.1%l[P Ac>xhShƔ$I$I$I$I#Щ0^瘃c lk9p79i:<>hEu'I0xXqywI$I$I$Il:]s:A˜q2uyL˜S᧔E=Vx$I$I$I$iEiÛkk-vv?LI`=B%j/ 4'Ywx{RcI^/DI$I$I$I4ҝ@i95Uk`ۧ0%uQCqCƊ ]%')a3j c#I$I$I$Ihm)Y X@rA V҈Jsoj'0V lIxߦ4}qV^H+&d$I$I$I$I)R۱E*i[ XX98|NzKVJRmCi{PHƉ ld$I$I$I$I>Di)ί+N2XI#_(#㦄1,RIj{)c;8 tVY+I+$I$I$\ ,)._>cnwVIi&a)+sIɅ ģn7'J$I$I$I4Bkؿ8o,07W6X<RR9'mP} cU; x9ه,IF$I$I$WS9*; X{cURk؄8xuTq.c>I#kƝ Zo2*=hc̉$I$I$I$ gke4XBVT^^u0ݱb/(Iu]/*λ,{)I 5\Gi.;xM8xdqJ$I$I$Ip,+ SZ p|v}IjMb) ݍGg0n7a9HIy'II6dŏvnK6N34-W8})'I$I$I$IZE -XJ(icƒ[[mwPȵ Ê3T.~)'p|q^,θ$Cs%nWRp㓶o$I$I$I$IjAks)-X\1 c&p\b^Lk9bׄ1/sf@oI55#I5g6a`Lc&u/W4cm?1I$I$I$IF{ۥ{ c}̼I1Hj?M$Z)njG2̝ݑ2IJk0pj1i,.k)z±ח;i(e$I$I$I$7U9 ?\t̾U9xj8ImecBAi\*!gbo$sZ1*[=$)݀&q):f s&mO}e$I$I$I$m"0c>pnoi ($2|>X lZx[$PtsR'I|sBBUYt̕U9x֋$I$I$I$Iu.ZiI_N8H1mUR뻐rW/MV|[KRS]nZ |Xx }*=ŅJ$I$I$Iv fI±s EaxcW,UMةx''۾b*\$ k2B-ʌsN)؞B%I$I$I$IREZ[=N(6?hY K(e=p͒ZכCZЩoq/)KRyG>Om_4^ N(J-ΕlK\I$I$I$IԊQ[@'>pcu.[R:sX_ _ߨ2~G9'F10Q-I$I$I$IZ۩68ںێhEKjIIf x?фۖ1n nIJšikI.Z nI$I$I$Ib~H6Y+Ԫ ?!ۜF^$;3cY#/Z$I*$I$I$ܟ8]1`bcIj` 1'Ij`M3c0s$IRT$I$IT׀C KI y )7?wEIr pgA1'J$L%I$I$IYP*,^:3y1]$e@ds$IRT$I$I3 Rg{  %y19Q$Xd*I$I$IJpRށ`$;pfAJR~ 9 >M$Xd*I$I$I1y]ܝwXP%5 M$t$5X`*0^4趥y%I$I49cxA~frÜ$|C'k6s$I$eL ,2Sy(I$I4B<@c=KF>I~(nn%JR$ߜxA/Q$I,?f-2$I$I޶To#eM>I#B~U7%jc/'(I$IReGYL)mlI$Ivw 0oIjg'mIR3Մ$I$Hu!p0hEUcqqB\F͸8I$Iy[QT$I$54a\v3E9if\$4xM2I$eŽ~F5݇nH$I$WMsbIZfYj|$IEFK{ $I$I&7sIj/_l$I M/"J$ Xd*iIG!I$I$Á&g@I\IZ MϜ(I&,24ҌOطQH$I$o4i.$UԤd*-y߫%ID0^OX~zB2`)0c_7EBW» 0 XXW˧8w[XXxx,ib,90X~ ̢9M#^'5z[5pRR5 Xg!pjx aYw +yp PXABr.Τnsj&ẓ:{!PxRB$uNL@(n,$e}6Ut(bɟG ^X'}nT8f aW S5x/TṹƄضw"WÙ\.srX`"d5n)ф߂Bp!bϗѹY^!\|kg zsB(G;5)FI$IXvo0v+W4KCKj'>ؠ}&IFV!rBẒKxcy)+V ;C.~PUlm ΝlP%ڙ IDAT >A۵<'ӎL$ˀ Ť;#1xV#5B~8p IϭHtOخ t|_ ̿$G(dƊN4s)=~LWx勯 $ Q*? =+rUs|;￁CG!7pXko =H$IMf!f^@N"|I$W$IR ,j5dBe6 H?fU77Vy„ h g+oVd: p`*ǘܖ0T.BTdZ!L5+sU^Ic#ޥp8v8/3لj܁#Ü>%lSùڟkac?s:mbegQ}`S9e\^05Ys`\>2$I$IR&/<+4RKX-tmAUҬ'I ҄y#}[uH["]vΫ[}p?1zXUqn"?E$*NUW{ R$I$Ge%Vp9S'^1Tk;`JѾ{sxѾJAR!꘿=Gw⼤\kg$IN]v%I$IRu~B?X:|0k0X%I0DM$MC ^ؠhߣBzܐ2II|p:mm-sܴK9^1 eeƹT -~96)'Bra|W9IG$I$IhƲKz|# $&&I7{4I6M(럟HW3k.7-I1BS h$Im_n:ZPtSI˔ VxbMj j&g |QyJz\&P2+rK%KZ¾ÜT{{1Tk}$Ŋbڤ=oQGPx3!'\,!v1aYm2s" h|i=y>D6]HB$I*,:DZKz>X g"dIR~ג]pFK.W$I-d[ܑ7/s*7 '6]Drr ۶t,+K*Jz9^}L̀4p]cR͘&5>uurB?KH^] AW ARL87/dhnN$psJ[(I$IVuT%eQϭs %7ʗ,2$Ijy8oe%O2)e(^}@Y,M˛RI5,%`9#8p[䗁%U5,)Nw:m*> L#U}3'Q}nn.G$I$i[ J}tI/ wI#ũ-uaN$Ij  .Αm_+O(@d|!m_f0F^Zqi%IϑF?VKpSBA)5p3aց5^H.p=0P\  oG=yBn%w~ 8"a/ ;7kJƐ$I$I#}8IYG]HC1:0'J$ۀG݀7o",g?\Á[(y ~x*yr~¾U2o Kr!pNZ܀1r¾F xBiL<۞9ag' w%[=C(}V7Arx|n?SRc x7;Hgy?J$IG<"SIYaUKC1A5kN$IjI@PY`kBwm}=oz8f$fUk"v.O7\gJj)jǥ$- Umak̵OnGm]&¾R[isC56OHXZ.7_+4 L֩3I$Iޞ'2/HjS[k8wI#G'j8Ϝ(I{Э]b9}{PjPFuYk5$+fF-EI6:hg7'۩ ;a[0o~ E57!a_kkӚ͊\\Y)77(`}8ގS$`/I$Iqpvs,^ˁCWSgN4fɈ?$Ij8a+h$MR-a;s'۠viuG;.aߖe IsIjrskuRy@Rg5ư&O8u;CYS8$I$Iϧ{SoFy`$I#u)ϱ^$ dQd }96aR"ƒkPǹ'{ccڗG¾R{v6P,9X|^KiTϛ49Tߵ AR5j|¾Zn|,BWZ_$I$5BeUoF Ǜ$dw8ޜ(I*2%u}o&O(xlWj[H`:byxheӈ/9 "\_':7a߇ I\Kׯr+Mv/wجq>lRw4Kݾf󿔰o3j+*Uc>a$I$IJNBC5s5Ih*5'IɖV{͉$Im@6ovIؗԝse MvY] Ϥa%k4xZ$;!{,cSu;X;CJ #GVk_zCdSd\,]U "t $;4ӁCLHxhSiN1g݆9G$I$5UNIJjO/$]$tVˬ9Q$M,W{m}ÜSy1<cP7PێPWL"/>nq ܾ2}q6!,]|UdB˫8Ϩc|~"ؠXBas-'nSk8b*8Ug1~r$-/+J97"tb{R[n*!W0x˝z-w?>Xc\0OE`Z1H$IڬCXf4Z}QO%E>'^W$IJg \pp 0V!5J ʹOJ87&\JWfscTSd I1Cr7Fcxb  Smไ_V-΄{9&Sm)~} c@0ct_!dynRi5XD::u1Uo?*̼/.' hoTye+s{ M#Ekeᵲ #>Sżk7T8!BqۋΗZmP漷$/6P|P/?4nex׊s_$]`?"tqMTKen{$5 6%$I#>UD}$;3I$*m/Q3]9&dKLV':ץnKuqaIO&ܖڑ1:@iZj:HNlv2wMqB c&Vm',y*3TB}/#,iߕp[Lgݶ6'$I$)+>'(wz-[KRg D$i$;pA$IB^ "P_7m2F)_u.<}Yt|E]OR籢{aVEOv'phsb)bO3t[pry#R1 <1CV*2Xmxm>Dpm1f"H(vrE:)Vtͣtq_U>x{8t]$I$I='mbIGDo_htc(QI$÷S ?){p˟payjXD2Y²x/p m՛͢t[[*0ܙaǫi`[BX:*/^l߄PG%:[pMwPy2x V> \Mx)%pjsm ||b/1? ]5Ec5+{'b_Ρ46!UrXB^'B~'zf; 38D*iK }v%:VS ĵ8>BG-I$I$=<ԑ^$9'c\-)$IR"r3`c’]J(tzЕ^`qA(nL([FBwG]岴XmB!Px5`n9[PWn1k5dB؉{Ph:M!FO%Cc K|XKx.$<Of0~]kqtA|w/g0_NxO#B|8L]M) < M[U5! L2(.Bo3N6Lq@QLH$It>죄$M~}+$;oI$)Yv2$p6:x|`?\F$IzmH1࿽O3 IrJ?< ׈$)QJqN|cAI$If$ BgP~rSn$I$62o6ҢsH3x9q<$I"SIRՀcHWl:%I$Ijf?9Imk`)+rg Gr?C ?p$ITTlTVnvВ$I$ ֿ9I:}%X$)og"'s,$IRSYd*IF 8xtfb!,7&I$IR9=ey" s,x\αH$IMe$)1ыdV5ӄBݚuk2@$I$I-y!I:2@$lC^y"I$5EzLnHWpzp*ac۵k@o($I w}BZB$Ij&L%IY8xtŦ"cUuG`|Ñ$I$(^J>w" y!I$5EF8xtuΊk~'p$I$I$I$IRJi `|` N_vkzԍw0CP;:Ϡ$I$I$I$Iӊ\#$TU4?5t)ΛrK$I$I$I$I$)W'ش8XQg$_|$I$I$I$I$Ij 3ӀHWp p `."BWI$I$I$I$I Jӗ݀فsTsN$I$I$I$I$Lf:1Bg|=ˁSB>!J$I$I$I$I$u;IWl]QWTw-W$I$I$I$I$IRKAR M7=ʦQuO$I$I$I$I$I ,$]f^٤ibYI$I$I$I$I28Щt95 tFݴQ5 !][$I$I$I$I$IR "]@Ʉpa1o$I$I$I$I$IR !]fp0Xnu`zc$I$I$I$IjIQHRvVIq|@o u%}`ab(<Ô zhC„qrqING=Qo!Qa~o//ܢ$IR癵-V[{ja {bXsF73QI$IʜE$Vc]JF8)/ 7Wq~ |8XIDŜ7n8wҽ }^q ؜YfEqtM;z?߼$I3{u6%;GDD N󙉤kpWw=hAI$Ip,2$IYX 8Ppks~I 6jtylq$f?`L1Ij5=}Gj^?MS׃xFy\7h"0X5$e*`Q /APuk{%١/6%f 1㉰ihi("mozC+g&=ÁmGRwŽϸW󎧒@ytVQW8,Y'.0y&b荈 s ~w<($PJm8>.Y|> Y|Uc1c^@G6;Imafj IDATYqau}u[z8`qߌG~Q^qJyzbk(&>}sU]L? T^ eqj; w[R埅cO;I+\Tl[=DĞ`A$q7ܵQG$JF)85௄+c{x~c5=b3ER;pVe_MqWT8>5GRz8|̏[M:Ԗn9gGB ֚ѷ͞_҈Tǟ6K ≭כ3DdHE|w\_]w8$>Jft`ts0Qk8E7e8莓~{B=J?Q[W }4&&S"t\y(Ʒ>{YÃҜmn_$ +x$Fww}{z9`z nދKJDtOOnt۳5kw[Rϒᎍ`AdxQEtchxXSdqGk0>͹QĒD&%E_.Fwlr` <{{Y4Qd18Z>{ٶ'w:~+w[ӌn[(>X7yq/5(,I-(!M}}37 J$5E$)O8p_"}N-㟄b٧01{>Y0+y'兛 ql!z؅B1\-yƷϛ8eoT@(^ytwܷhQs"L}Q1{qWD3B}w#bBVOGwF4b~wmTYwfTm !!NBoK,m.ea-C@ )@8-,Ym$ly3O9s.B ƇM.ak:&IiAR;@Y\rK4[R1=!gLјȇ,*t C$Ʊ 2!KB!]L !HIJK>vPvuRoˁA[.e5&7!$Ma%$kXnM YrZq Yy栴 !EN@{pq:X`\TUOqʰ}`\B`ߘCcنȉ{ GHPh]\@AōfM !Kwp&"@5B]ߵFYBK*Bұ%VhV'BHtk"j&qx q͈Ee=ɲ՚<!+KQ)!B7 x4:Hew+lK}US*o-I:zEIWЌ=&~@Y8g̒ڦĀ10¥9>u؝Bz c&q gbb;hsF-;X7r0D$WxKѥM8cJLv݂` >UM ?¸LOB{NӘ p!gbB\F/U[;jE*}-gB,79,o}BE-,tX90;G,MxM{b@!).AG !}MVkFɤ3E5]*2%BQNp;w l/XH$~U~EkM_UM{S!}$`e\ ٣՞Z8-na^/zOH3$\7jQ]ϙWW~ &fIG }B1!Xc4YM\&iL7nj? Ƹ7*{+BH2~8]:=ÍqRU4Q}BHE-lb \b8|ºϳ!mҔ)f l! ]cQ&"SB!Fo`BϜ=>orq !vYJq&U\%L5.Z\TWoWLi {M:Е#?Y6LcG,U56q18 I0E!mT ~> o͘1Z\;m82'\Ƅ̗#. {#f|/lʃ0.6XUܥ;mBH{4T-^âFLtCHLyzO\!{]6E5 "SB!f2 'ĩp>I xY,s!c23y \ΆEGKy\q`1!j-.`[b?2a_)[\4zIcUgQ5|HbYb{=H4-`rº^Ք/)|$DE.]w9rQ lvR= _!04fv"Q)!>JXb7rq1YJ/l sB:.΅*BH$q$IvY%,a~@ܴp,cB!W7Hp7ہ;`ʿJLgtUe!E"CiL\7L- gEt }BHYT 1aޒu낙n[ln[L9t#" !$U>8K`Cأ)NclޒvN$بl|#BHgi }9ыWD3i0 ` +lLЌ=C&~i&,Dvk'I4;ЂAi'/s:_NS@EW DVPk)&C?3.(K!BHg C\`YV3`YΥY;jEb!c\b.B|0'M<ӛS02c wQ)!;XBWkXza$V:јTUM8S!DfQ)!䆤!`BڡuƘGT`Ji&Uɂ}mKk= B\0Bz%.-݂)S>P L9gNKziJyb:WNRKoAZҥ̗|B  ( No:*2%BH_&ެf`)G |gm H/f#BHc cOq&mnry1"0ٓpҝaPg ktLzcL{J !=G"l )ZǠGZ?] h .SBIw1&槵])+!zҳae&;6*vY7dDeڴ'c a\&.ҥ9Yckn6կZe{q*ۅ~ V ?L؎EEBˆsf9*}]f:cܤ%̗!%:~jloرf}Ƹ'[6 !$6 ݙloݔ=L1[r%H!`֤uCآh|2%:p|-q !$ff a$۱nvR ϐBҤ3a 4=:C`0B~]f]Z#R~Yƍu%jtR_B!/Ek\t`"MI;y+@L7-&٪lDd)nT3 I@fg!!GLS У Stz"Lӌ1EGBE!=͔AR'z&^$2.KB2 ٷqA&OjBG ,1MώBgӔ9 ,n&T9$K)un{g/[s+!BHVYeJ&m{sӫW[=#tJ_~?%X| qT@!`oX `&RP Ki)u5{)=sX!"9F֔Ilg6X8+!t;sN& N0,l2pcЙ$LH: 2iXsa Ek3# 0&ddA 3!3Hf+2EBIY8|*Ҟ!,TUYd#'BH_&ĪU֗~)ыgGNTdJ!JD KpdvChjxl$b !'\P6M)mҤK3!$df a0Ku|?c̤cY#NYܱ 1AcbUuYR #x$-u+wD~tLX.]!M c GP g&O~0ߌq[~_M!]dJABܵ^4ɢ?΄Bm,N;Ln:]kJ cȤHBژ̄3>̚UcǚccA5.1l1&N=g\iBHɂ5h%:f"#ڮ͌B2##.%ddw쓸[E!tGy5Sˇf%B`笒5ƃAhjۇȉҟz?ÂP@tL ![@5?p_"㳜Kv !6lMv!?1!4lX[srcDZPfP,ABI)! cS-g ;FDؤsMIB ͆UcKs C "LH T7oVsaLOB!g\ ?ɺ}~pK3!bbg\S`g9^uư6:] 2+U`4{GܵuFMKQ\-  `t\<~/t5w. @i3"IѤ]!!1! ,LDlWܤ*cxFz`Ɛ5\ K5N/Xs=j[ժ69uƘ+Z~O6{G=K:˞XMOL@\ Ga R>/ߩBB 16(+fΜ-Դ\iBs/y!7.)WZ֊C1$#Ow 0xL`kGKP*!sG'/'/ظy$Q1]Ǧm'niƘ1a Ϝ2+-L !U8 YΥGPͯDZ<onZE̢݄:52M%0 fӃ&~.Jھf~]T{\TD./=JwI7aaVS^c= >Oٞ.2Ȅn6{vsMHP }{WMh !$;D`5_n 8&vZ~[]VO B!d{7"ťGf;`xUM{ c$!f'{IX`G-XI3lD6@,%Ucǚ#L8T n <"Sa*lBWAk0ecf_{cbD^,%Y ]Zr"FfРFECS>VLEB `,x9˹tk\HiWKXB ψ1\?ܵʋYT"vDL;sJ~XUO!"_4 ;oj9:Edz!NVCq{sy/ʋBHq{kO >/j'yNp%) pX1+-K!B! pn3eٗ\!B@"M08o~ASh=e'R \ì)KBHl(2-"SB!xm5m^DvA\ȴ&$t̝BY 6岔թ:7Ն5_e'MN!B!]3B!ϩ"Mu0au|~HL/c,"4SjA~pw "SB!=uIj D&X )>G\ E)SuPѵWtlCHi\oMHsΦf4/wvnkpMҋQ`\E9L&5k@t]ԭ6N^Mh #|BitLjnVVc^vuY +c,nR G/]4fq}B='prsQ*"7>j3gD3?!B!$ >9?'Å|V |]5m@3rEssקϏ[7ܾIU!md΋U.CasJRVeGYR^jC?06ow͹Q˞iHueVd- Tw\{-Nz4y j4>H6<9ԼEYuB}1nwG CH?~.A<3&\IrjQ\,B!ݪsqiGn>Bt6`eƀf#BI"*2%B>8}T9Ύ S .̑ryxs664k [||{=\ L,WS-2궋G/  w.`q >xL boWgStx?:nVdzEkwZ(N4^tKH_6, |B9O22)+٘iaxoQ:`q@hDsM&|{pV^ :7]8$d3Ϊ4R1[yBR7,  3 ) !}ЪVQyM2`RN(dbL$R?e!Ѡ JM\[O˩4Km\nhp˕X9" 7;<.ѵKH QI9nopMx8A;%ZI֦|Q`V^Rx%ַ=w6ޙlo)x;Nxs{mѱwV:9:{SqKt22B8%MUO~I׌EB{| Epx!m<*7zt9ҝ:`izSl,gIi90gCN?EƩsl/jxPshfٹմbAwU-[4DaCubaNMO6 Y[r:*϶vO's!jHwmn_!3[(>Ie;B_z&GpwQ)!BH9ۉW=&svŠ}| ~𲧺↷*txֿTuv[uݾAﵪ֨ucXֿ(gXScO2%OUy8/-5SmWֻ_bPuԪWUͳ}z{ym=;4uS $Z żpY3r7};Q!mr9jᾊYd%^x)2amMɶ3l+P/J#Jm:njt<FDfQ_s knĶm=@pƄuwuc2~IQ}^GD.CWy}GEB!ҎKk[~D7ӱ:oUcg#J/NP;4 Lh/|CR}Fmk^rimם[x;:2'%`|d&]S^m= DQG @ O4 3fjzAmR-amqlB9qC)a"q* D@/V78L:CՆB¢0vlLKXB1\P$;$`g'wq>$B jO)W׹N]JvLj|n<#(tpScygr /rtTMu 1"Kk[n;@}?^x[Po7ףcL^ QtEm˭#U,;jVcu%zA2VLzWݾ4=6fmڻ_-unCiC#y(: Moʂo8̿x̪R8?{uHV8kMt- oow_Gu `ϵܽ\ r1 YNa [tv4M$QtJ]N !"SB!B-֣FǖčamrtlE~'[:ۮx@訮3>'G>ufrĶȱ|l;L75&_(V(KՓg-MFY̾}?\7" cŖI5MQLjiOZiСѱEZ(,{]nҋׄ@EZo^\T MgYT>\d<hL !B'[3_Ӝg,26#M1=Udz[yҶvLse֒nFes.6>0> @fifi=86?>ms+T]WZ~OeL9:|ItAIW8+]EfIRE %(EM, zƥ-W~3q:*0͗M,!Ѣ.ykLq/5[/32@I˜ a Ql, "ݮ^q?a]ԕBRs[kb{2CPSl2<8ą`Wo=W5|@{K!& !pW%:=(6~fQt]q.#W*Iq^np/G=čf򙐈E!m_(Kϟ_.N6.. j[NP`*&; dna ڥ[\gT=PC_WZqπk֦WczSc>ݗ^wML_eُV~NO^qzz^݁wNȷmNePM L%@;|:" 7e6['[sɬ$(^]/vs1k.MXsuA'wxCϽ5ږU\BHoq^"?:nc心˴CՍg L@,J3,`p^ҢHpO۩龰;֛+l;?K;(xDݜ }UOY,gZ@q/.' i;7j@Frw$M!$;#!B!\r,Wb /)uO%JzDGn_lv;+erDֽ;1V $B WSƒsȳYBg O7Ospmyֆ>3݁A'(0eg5yE#=?o  t> zdKtAA,;aD#P+ps&`}B̍e7.K.NO;}WG/iVʢǍOъd)\d3GIvnq `ad#V7gXANۻU3ci)EwX|{sNm/󶴜4:fbSY]M67sfZγu4o5MՇEŎG',ƶgmPx`cytRL9ޭ#ÌT=wy 丽DŜ;.yKm|wTuH8nO=_5W9VC"w4΍>nr_Qh_v yEoyc͈܋nDmcnkW=%z{o; ?inITinx崏XS Zj>0{'0t5ǯXg`6f(>?i_u^JbjW`P5L^v.DBI@k%[9X@~=0qpj@@P8 o<A̋ܞϯp30 ΏOC@r5 2TdJ!B!QUEf>PQxO*ZƔcڊܷ4'=`Q&=3dgVIm5yGqV7&Ź/]d[ hj=^Եâ_\Tڣ7uo8X6{--ZfQω'HZd:c`*mR~w|Mm!|Ԫx?/+ ыSm;C-oԪpI/mBB^Vr2GŬd9:Fx"QDAs]ov:_ Wa7әrE!w^ 4z36˫5G>_d`>#{ ֬ z `慿e^X#  }Ł5oE=<#s1>`s?IKܴFB!ҟfM?<&Vn i~ZLؕfZV*FWe,!o>P)4>?( LI1j{24CbCJcc,'3GBHL̿-" .{= .WL4Źko*˻Gbjǹy蘅 ,hcfߗ#.~.Jnm7m1@Z^TpW ]4I,ޘX; (򪇤He錹{yTs;ةpErNJtr"X`?8m44o eignOu&# ,XgmdwTC-zGYC[_·ͬi>=јŁ`c͞p 0I^Zv*y'XmGѮ+s<(1x-:vUkvV|uPdR}>T^yp_ָ\_94dN*y_d23!T[iushrж|<-f`qW^~' Lnp= w['V`jF>إs|#p塖s.hvnߝj[ p̿xc%pt\`j+\o1w"SB!B٦&[7ݢciۼCb[cu>&,koL{d tc#73D;!߶yatL9XĮ0XbzE IDAT#.m\`z?xgREPe' Mu9s/y ܮN  ^6z&vOFoh5Nf]/G)Iw hkP1MK={ϡ"SB!BU4o{v 2nцN_a!rfJ"g\P]Ւvɖ`64ovnZ>Lfĕo;܂VM!r%VDe7}57yq5 SAR:sV>@L7&嗛$Sr71)Kc.N>zu7M/W9V;ט&zmŅ\ 0[?,%rQxg;Yeqҏlom.1) ,ߣa<$0 &Xsz6߮nݳ-ƽoY 0k@@f 9[W"nt`OEc>|k^ 8}a]->V+pړgO;a*nƪԭ;hZ?;{!]u2Ծy=0^U =s6\'(,#%GWB.o} r둮sBE w 0ZO5"SB!Bfs$ğih\Bj!ݢ7/[t=)dMd36(f>Y uYmQ2SmW,8u/o͓YVMtت 6 ҃fZ2*zc,(+*R 7Ҭ.2vvl,2 !5hژ藗-LVvcbkBv gE_j('IcwѴ=/Ofw+J]yE.V S3ғ| s&_b̳wf-E0sq1R*2n=t]{(vp|QՍք7=E{ .+[|&X͋> 1E !m:}(vf3/ԣnkuѪ4B[hڦi[B $8 ÷y:`-u{.[xd*2]8 ٷw qrG; W L!Ka뀱7]!KarIՓB۟zmX8p̯Uo:^3pMcnN'i GoQ32n})6z*2%B!m"!>u>ufWÑ B}GBzy>uxUHUAsB6n(z<43wSʔ-2fR2*63?{Guffe[1L5 l  ZBB/G` 70۲-7>J&$9{uw]I^w Æ#ErIbt&RYd U!-愀=K=;$VjtQskNJ 'Y]oibk3E-21zdI e|dH2 I(r&-ܤ!Ļ(pvq+Oŏ" f,Cbq^!2QǮ.h3o]^j#:[bEIi%vy5^j,fZUvF{[\$Kp})72X083~XiF~ui!m%H<rǣC%OR+8k ?:@1\P|& x~Ʒz(N[oCEB!$t,;|ڑ,Y6t!tl[@Z|*_KS޺DiRbE/_%](/}̫it]da5O Q"}lg8q^֤XkIj>Sg99Bv ZT Eq&|='̐xΐj87i.M ;7Ƅ<_?Zy͸mA5F%y{)Nt?bx|y2 Xg4DIwn@{c x(yػxB!B#(cEP !$[*y{O$9 es+2 ",iβvJK@7^P$̒O(R'abjYi<\rpQ<%9DHH:0$_wE+ֹfw>1:k|d7JxܧV_ƅa l3toaegdЖ[L(AnA>aX1$$$oY M jΐPi%=q~F.UM{cգ2ObCf|F}&7ySB˯]l.Pڍ+-/ wˍx~>9:s<*2%B!.( d5ɛj3O w6BC!0R~%FX]z56s8]w'$iR\YIH(A3cW`ho?@6ҾF"դ{LBbu.xR,fSb5ojYdC10 ӷ!Gb8UĞ#)Ox4y}QEuj?"D] ?$ ~i|nyMX밌Kt_ӎY~%fjt|)2]8s%ui8ch9 }74{;E!B!{Xs!C N~TNY|'nE+PMVQfn\"؍U4j|xfoV)ֶ ?!S0g:"dInp8enH:9oZIEH7zWZڸPmAHq%zCa)qPRm#;Ԙ1p(<ƱHw:D%{m@#'. .mBԩIAWNGl D5=hzp= VkE#R˩#3>-6qG.AuyTdJ!B!{X% -`p`BzF^i^H[ \<߹5>Tdifr#c\2sò <.I.s-i2ܬ@%2kefeor;K~pBuNT8}&˰XT>cICwfl}&9"5nzUt&U8sqYZ+~. d$*$cM153@DZr:(%sNy: N?U8VL!d[w@sˍřMW> [ L {_SVEe~KH}XFcC*SbջP)!B!'EkWE6>PJ<\z~Z6eo3}%恮smTyNʉBbw&JR0TʒT0d(rA':gTKW[P2 !sJ;FX3_ԤN9B8jvOmO&n h6ȑ1hCR̎d f-eBQctdR ńZ+,cse= Xz6/z۸0 &|]73|xr;2q,-@Fx#0qpd`}Im11uSW@qwwϱ"c\~85KQSj O!BdXlɰ_EP;0$=!wY LNβLiM!ғY˕j}lu0 *U.P;S\̐Cd(R'hܜ|Hv%:8ْqI{yMCX͟0Dc֩|;JT>:iϰVEfYl Sf`D-W c̦XńҕМzpWצt`kV0`^lv*㯁|{pTS,-c]e-V[g7w@4;:{[` &&ɔB!g T]xyn5xB{}GUԇKr&;.!gԩT:}2c)+(yS@=225Lv<7r*k!$-F Xy@==i'XV B$},iw[}gU"ˏBEv o՜mғU8n)#Nltr}ebP~!IDluQ 7{9rdIQ;4e'r tao3"N([LcfOIZ["mn;恮2!ɺ4߱A-0* D֓ mژPnj>[)x^wԉ =yN:Ϋ8 ?Z:œ&lcJyGO7/h>O6QsRE&˽A*'&yS2cz@pSmIڽ.U=S!\T!|pғg.0umX Loߍ}5< ~ `d=3cmP~!*RbɌyI?ִLEćfKOϧ!mBH7t#;-%ͅEz9]GXq}8!BK n|ge"eqJ,=J잚YSy(?-LNrs 5.ưSrTd6.O^~Oghf>W'ȴFcp+f*/B'K">X^lrÙ鬊580Mg!~"ݍWYt_::~8B$\dtLs;x|Nc#0}ӃL4@z>>jސX␍+1q"*;{lN$E5#\ȚPl1> w/T{TPLx;@X02E)6 <澝qLu`7LHcݽ`πI%-B![)l{\2re|EYprEݹ~l~]mo8ɎA阙&`8Wn<'D^2~& }+|XtޫXQ |Zi=f1 Nrmsuiݍ'T]eQǿO:{Gl.DJ7}qO>%œM}s+Le׺ǧ2!8a<7R'=;' #'/]笈MYZ~zQ]C|;OOG>u-wkU˩\%v-1KXhm?'}%l8>ªv K,OԺwf.k:rKUW=?Qz]!A,cO6zHdWۆ|z- !!le{@3ۆ>]dHG,2CTw7EAnTNWoa52曫nKEWβUQ^ JZ=5(v5 R^{Ӈn/p옍U=z:뽈#EOXt7E@B7l؍Us@8ұ{]=Va̝y|&U-K;̤,{4X:еfbͪ#mCoc}BiRU/u|y(dGYR?x>>jZG0fݭիڐLBHbi  һ.6M3n Ja5"SsSSXrJ=ˀ f[.j[-)8sԤ6fG\UsH:clSM")]oB!B!uίόRGn ̘G TY"oY2Xc=g?pce˟BD]بQ؇[wSێ2fմD ȍhj֖:dwH-UȐ).OBXZ߁s+m+qo65wD.חLYZ~鴾xGͬד.8l:!! 34^UF12di{G8`7濛"d^zȸ_V{ N IDATC}'͋^+*y F @{}mB$,+<6&ϬV׎.c2cBo5=0kZVEt!CEHrٮO3l,涀Ry0e@`lGP]lZ<ףhh.sFE-҉V꣝cͦF.L[!Ƕ`ȵ)mc5>:Bz1~Uk[| rw]uн+\v_mf /|m\7T5]XKOuvׇx{UsQֹ9a3filTvO[mQ5s v5?0ǰyΊ4xV闹_ :wGCkCjgF=u˜CmInFwMG솎р? Ò7>灹V`׌j+jl/3Fg~yrcul=C7Aa9Vµ[:`XQEEB!>Ph/z^B.~98olܳukU\/嶛5>-8I"lcmNUyC/8g)F́Y˼Y 3'DnOT{p˫Wx&SkW>/۱q4mԩA!ڻ/*ƋsO>)wZW|:ls W$u4 fO5!͜EU\ {Om뜀QT@S*BꔏLOgcM`(z-10a'ّoV r^d_m ?mc04:Yѝksן9Q$@S1V}  s5yj쪃h,v5x uKnz&d 7UG0ݯsϖY:Z8ڽh?ys͘; ^>5f~ns',OiٶpY {Ęe DƟiܸX̦/ :~*^έ|1f%7VpO>T7x~FtP!N:}9vM3ƇvS!끯t1_1u1`5@X$tz/"SB!BHJihd_ygź&ZL^0Ê  2]&pY&VQB^k^^R@Qje@kxV/|?Χ"S19y{*Cʐ`(xO@Mw΄꫶]vI;C$ vIY֘ݻe>zKcGHi] t[T.YjIr+ëzMER8/(gEmH{=7B7N3FO@s$)In8~*/nI |QfeMMI$:IBV;ixY5KR(]c eT[:ZP7Ȭ.6˅ÅIZ8/@Kj\ ǏvY_2W!vKy'h܆s]!w6ΊJU- P7TY veW1fNaI ,/Yw ^?x( }4 þ0v34 lp9nFEB!WASN{΍'8-"cD9englndؤĵυQ+rRpYfx6 w6'?$z򝛯wm[@o74ZU8BBV* ~ZeФTM/wlΓǁٯV"c9mAK-.9S;SWfβ/+2b~?*w^ra(5)+.~,k5jPt@KWbIz`Ĵ ^<$YN&Ǚ˚D{(gq붹5-TS#I;rXHuB'clX,|AbLtۉ߶{$qV:UM DJ?K!V\f= 2]`X Vn=ڑx .&n&yo.('C<.X5 -m)qd{{]GG̹xf~?p g+N.TdJ!Bzx r+-M-)/>"/8璘vy~rvecEBһRf} /_8)Zӝ10ɨ讷e1{9oTwjW7~7w;eSvKbRxvq/Y);XI,~mgnZ{9 a0˖eَFer[nm hH͊?I~&ߵ H3Ln˚,[թYTshwVcW ;%o[~幷4ۺ@(kY 69|IB2|x==Am|@XϪ0DZ|]Ǵq?׺zlfw2y$=ZnM__rڼٽrd=V6٤  1)?\Wxg 0a9+u̝S|B˻kpIl?f}2fyەXe9Em,sq| Rz8 X)&!q =>n5@J?fD&y:ym6l=)=w_1 ߕ/^d@UW:v:u@`);z/M֟f[XI 723ȖEj:eې,igt @B !=Y`JJsKugL8~}xiv? 'N{mQuVue#MnGԟş۲'UbO~),vxBpf`2t0n+0XtZXuPw0 \[D;wG}̈VTcޛ : p15{9'cF`+DDžp!p?vEw(ݒ,6O80˖峣Xriۢ2P41 4DZGFTdJ!Bz&V}MȦZ,BHo Xe cK) Kh\Q1cYLDZKH:Y;^rc\c\ÉB!Cwtʶ:+ۖCEW"&dsͪG̛c,k|<@Ҁ`-qLEMqOO(~ w xwPvZ:u2%B!ʨa5۷Vq1CHlpS"q1 bSWiZR5Z15Bf[@}J?n]|HψԐD!$`(cDvBz&Ko2nE!Dpg L+9O*Paj x.~`LSr`%u$}lU'K'ŀj"&C #?xO> \8yc;/K&ԧvT\8d-ڹ@$@OGxEP%2ROQ)!BU[жLFcBF!݋l]WXԲeJq-1!thԸ)ONf>B>ggUm\FMy*Ȧ"~K e]w!t'uZ2jX PY@]!PU%F !#"'x^|ޞ4E~y5@Ŗ"\Y#pB؊'~DDz2{0f٣-b~JA g=0oP_~|~fU~f|瀝LJ0Xknh0a pV“;~FEB!aB|-QB1S"@cb.qELQ=wT?lۻw ^\>-1wLT1!ҼKD10S"1f((Bt0tYLd0L8!$2X~QS C!; Ct\1IHԭEx`KP wt뀬N&_Urj_2˶,2p#9=Ś~؜ X9\J[RXanw^.Zm- mJ -s'AuA{rZ+=hv2}=J=oX/۳Z'7w9>`x `W{ދL !BH% \S1dTdJɘ" #*/pdDD 0ƬR=IWc,YMf8f,E\u[ }R_`Җz( %w{Ub>&AĻ@n"B2 sU},M&U;5BI& Òc{W1$f".BHqm.͂4D;| #ŴLg)ճjcEEB!}@ޞG1F#^ CAn qC. ZBRR" DIs0!i I ?xOmOJ71 BBt|GJr.&t]DHH ܽb!$5E78$+r1gG!2d*qjx ZIw+7BI3|d uer<+0u+%B!d CEwY- t/Wy˔qAeFWI. }&1xǰAU*C!*-SHzRH{<Ҏ,kuwD2'$B01Bi8;,MWC1(w^,Q~.dGB_u ;q A7Bmְ, BHlJCb}glwÖ)ūLi*lEZ%OBC@BW%Jr{&t]6!|4 !$aBh]H$?J IDATc6(!$1F!u!L !BsL$ۅˋ̽YٰʏVo0=&+[Qf.3BȾFc]SM9Xc Xd)B N"SN7 pma[}m F֩Zi& |BFnab-Kfe&eiݵPq龁% C{Yy5AC &CTdJɬI@MiqW Ľ_C)0Eݑ'!ăqt$7ˬv91LHs0. g( 2la?C)gxFt|paL&$K1d&B1$t!7B!鬫hgFc- ״N$[жNe ! b+M3!dDԤ0|yէշMAc%qPH0*Rϖfg٪fg٪|B́ sB H2̫ |3ba'!!agI0-]BH4Yj eMu5&樱qSz_#d32?g?nm])E+!A/5̕-7g-?i626,y2Mb:+ktyF%of!knƢJJB $I8t!*2%BHdFD:o_qve:tyr_ڛbD{LE\lf27BȾ!difら?0C뿮]\2)0vkDw$$cb@7q\NM2&ILϭpS {y5GpgY$ 3!D`L0P-e$B!bDx*;TX`j8TSǾY` _ƭ]d~ 8&>.*YE\ dIJꏒo|1!aߊÓB<UӥyYuA3pCq*T#Tfq"":,_]{豿TyB. g$__F:TY%J1EBIJPaxTaKkf(%Bzڵgl2e(B`, cHEBɤ*gO͟RHvG$Ҁ"@J}m{+1n(~O5B V%, RB0ɂ ݖLf氾:2&鷊)gI!2dv>.1Lc4ʗTD8﷋SϐB糊 A׌XVn" ag% &17 BHfq>N3)!}l}ג$rs56Lɸu>&6P)!B2-E `ef3^přN'] ]VƘ)d-nΘⵋhaj㉱ g Yp=) !#I;V`oܓ~أ*!GGeKkw+bsq.A3?$, !k>3?33nL3CL'jl U &FDjOe*'BzcXg"җ VG?2ۜNax/BL ![p0>X hp.=fzp52. Ac$e(5BH?1ؼ6u.$sL+OqJVVzo`bdI1A !i<;ds=%vcJcOB(eK!Xᚄua!tWc _^& !LT`o_QY2cZ{ >όk^BKЄ!c[[ז @qMh# r}H%LZpb9ݴ"BHo,Sp*ߙN$/1vǶȋ +=1qE&|e:7rE<7}˘fWq&toS[1W0V{J0.t;iz7q.HU؄,B&} 4rEeRpY @}0֐ M !oMQτ4ߧ2kbLJ:؍B҂KP ~Oau BC~;2f2ռ D!20c}r!*2%BHoYF_f?@ysɨ*ewa&̈́x}K!]y-bߢ=XQ̦٥KvP3 08gMIm`tgWݱ@>w$Q-+jߒ츣!.n>6BHy-|j­1 BsƬcF,ݵ1ܫk z츄 M !Ecyb$ ?%A\1n`F#$Cz, 1 :1C)Brs1Y^*2%BH_ufӳj맋,3ah ЀM<5c !$"x⏚"-&+;tю84[?%186!d0VLwG -]b&~?*jE;>]"vG-O`"[#Me+?58cT5vH;K0=e˫<t~NT!=oРEct{'@!\ 0?"ՙN72R04% 1Ya\P.!$JP#&"$LAG,3,ݭʧ2&PcT%O%΅O<_ g1kTyy s)իmOg(%B>H5y"ݶlٕTdJ! Zge~bt${O)9A.>cRKP^/wM`!C58B0 dk΀? +8} E>0>;̚x~c3,Ѫ36o&Q`n“!wcBVBykPZ]'oŠ&R!:#WݐO.1<cA40}i g5>>!Pe \bN+*_6NN9[ߦibKR~-UC9GDvMkhK?MI1wW >;s vJ®{رmV $Κ`T$ %–3\KN{Ff!i^RN)Y"RM4# :)*' /IiRL#at49{EFjt!Sm}Tvnt- |uHk4Bz-O==BtOd}`k9}TֶR[UIUJv(۵{󽾗$9k _5u)Yx- gV% ,Iֶ2ܒNo+%]ux4;^k޾[NnO|\69)á-2٥qLzCkπ{NJR{2^$ mdRKKݗ䪵ǟ3}ΜW:;۴'c*7lH3gׯ/zHǷO~_hiٸiAS7q'ߜ Jj#=h /?nt!] gLzk&7Iºn/Ӭ6JO ot Fh'MOH&Rf4$ 4N )lcM);޻}V\:`i: OOx1ҔդMLR4-d| i}ϔf=wO?7$ɗy^I_iѝ[>Ӈ(!Y~AHDHtL09*%=o{_ׅI|4M_=n]r#$ט1vyg[ZҭZ$gCL%I`@SJfL>-<6]$wው.;wN붫& | تHhӴ|-u+I!;c;4 >T?m |;Zڐm$S(=I)]$SR.ſNB'ӆևˎMrKi,Jf6cwΨ_>yLJuRCw4x_j~%\X$̚uu$InBg6"K[{NrhrXT:"HݩrDҠw9b|hޙqF$i<Lgc.7sO=lT[wBr8$ &)?('ɵ;޻.'sO:lċ;'IigRKtt_zϒ$YL䙖v_¹φF՛JO7HA F$i@xQ\ bfƌonCnՏivٲO=5wIIOGúSFj?xf'm7xrA!SI4X oZ[r $ |?`2&&Ivt'BqMRh/&O@$ֶ۷} ]\QkKMHwO`66I S''4Z-V%1>|k,J{:nCߞY4'c7RRJJwLwC ~jߚ$-=֖{!??66OKKi61n\RߎZŻ9ۆ-?$i0) Fsmpu $m?x1#% I5*NF;~c8/mB<yr#Ѯxω֍6uH?]ӓOkt`v!?M֖p=}+unc~$I$I$I4HCZ[97MO])My|=|y2$Iͮ8,gu] \Yt0R27;B}xI$I$I$IdD{@`F#i@()wJ\:k9$-!SIԬ$tu`M{C}1kO$I$I$ITW3f|w4$ ^@5IjkӔ{J%~û>Z4d*IBwP?^9%`q4>X[$I$I$I1[@^H6&I$4M% +e^@D>^*̙I$feBЬcEg=Fy$I$I$I$I$IzE p$!|%!>3z;A$I$I$I$I$IU.#_s p3p0๏yގ;WE$I$I$I$I$i-pB]:qkwwl."tc$I$I$I$I$IR32Bs!iuguĎy!uK$I$I$I$I$i#_xs!p}!g=FBxV$I$I$I$I$IK@BxhY[8$I$I$I$I$I4v%li$]~rXyOuJ$I$I$I$I$ H¡we5Bs͓SK˄C^I$I$I$I$Ia8a; j>Kj߫~őz;G5XI$I$I$I$IfV^&_@s5!z<߅W XFG~*I$I$I$I$I|6V `t݃#kX \@J$I$I$I$I$m&w[9`f3v,"x ػ1eJ$I$I$I$IR߻XZuЊ$5IK\Us.^5(I$I$I$I$I't OЊ$5pp|e0@߅ ̥״F(I$I$I$I$IɐE<Kۀ[3\sNv70aI$I$I$I$Ik *ZQs!K>ЊL66ol9jr/Xuݪ߫xk\4:I$I$I$IHL҈Bԧ&}шBvNF58yw|zJ֯#t8ٯըO)IuH$I$II<04I1C$ \-`[9.n~O9|"2l~E}$m)O$M_$I$I$I$@ە$Ij"L%Ix&嘷?i upXſ.kL9$I$I$I$I!SIWoM|;\ xu5OUO4I$I$I$Iϐ$Ik3B7I~\vT<ޓ k)7g u3g؎Ax]o%t:y2kBI?B/f$o<'<_o*xJktԛ8; A`?>ԡz [$`  ;;t:~S]c~@׎D}euS0B瀫#/PBg0`*I$I$I$I~`ȴ!lWې0B7Xk4 B" \AzX Az9!m+%epz箷w ]1?ʃhBpv^RQ߁Z kq Ks5ھN~D?7:N&%I$I$I$IF : ,ʄkG݀#xl>p-pkZ+#Sڜr ]<~Z &kw#l}^y+̡ڝNg=`Aڟq;L #t8e<_Xg?v't?GOpKqK$I$I$I$IMːi߫eX` m˜X j`vؾd^-e PC̭;7:+>7 )I7Vz#rVPUE L=|ppƹ:O.ױ6I$I$I$I$_UwS༗*ֲ^+=YPBGvL1- ŽeBZu7Y5P6ӁsPd(;QGwRBhS,H*~SMȷ2'w$I$I$I$I$C}-bUdlI)Lwdlpd:[׸fZS㨽‡z/ AZmLBh0f88XzX\ |j|+[ :*6l!Xе;jQr;ϱ߱$I$I$I$I5.v֚]V lSpE:9+"sxs/S9GԣȺ?xk#sQO.:SmY-:{mFey~fdBGs˼y[#<'q%I$I$I$IArK^woZUG6p[:`úk;ޟҧN!~]zC.$t*0y7?˼-.PCO|b``?B|NI$I$I$I$)65|s""la[Im7<ڜkĬ)8%Ce?'MrY乧g/zZBg qX < `s AO{f5QBP2ӄkUN>u3'B:9)EBkI$I$I$I$2UnƿL߄U|5`4.pXzts-ځ}aruPH[t >GZB4siwRG^ {; =8c͑oX;jD-I$I$I$I$ 8L>^,r9ת^'#cc S5J.>G="ף4x-ki!J8>OOtz$!t:yW:fupiؙCG}3$0`*I$I$I$I$aT[Bא4G{0زy~*< ٟX Pp^_"uu] rhdοPǜz8#jeuZK(?-Rۼj+baNﻔI{sSdsW9K$I$ %0K{fê> S ޝVYzGEk%YWvǪ:F^I_8+Qct}ZC$I$IʨԴn߫b[W\kbdo8u\ "y=v+8>%tƨ$;Rp^=U_קV??(:WEƪƺ^Gm]%I$IR{?08_ K'keQKhuTd 3p'}.C= x8b|H-Yqnw֑ JI$I$IR?&ء`edlk.dMƶ?Z:m^zEbsb(~}$_gX,ܓ_W+]}o̻*y$I$IR;ئ5F?$t">_ϡk܋$I$IRFn7MDֻ쟛#ktrrV7kc̿6J!t|(D_]O-Yڪ!I$IW GGaα#@-NsώM֍s"ݧjXDžgesqdcfFv $I$IAgL!tr\еbO ~KԙfW}mS5|6VJ=yVYY'kVZ"lԝ!!,Y=L$tYC:[=B1o#t윳W> _ ?~1!y~~ %:Ώ,2vc%I$I3xhiwn"vS`f]C$I$IpcH~u6<Pf \SeMczdqtCv9`OB8mɫXVtursUϝ,FNeBΦӁC[_K Rd!StSK籜ZC Pc,x`o`/"?dU);~VkhZ緑O?>F.~_Z*MRϢ$I$Itv8s%dzld Uj87V ^]C=$I$IR!SÁ%uj=L'5XسBZK!DL 3I,!+l-biT~5tz9urMS`pk9o>A6;Ӏ _x!5~F·ӯ 8Vi$I$mUF7Tfհk$I$IUil|M)ar`X3d`L"`M*%4_ lq!^BOœsj$I$I$IہK-nugf5.25S®A]$I$I J$I$IÄi;u'[Z[UuW28Ck]$I$I2d*I$I$IÁ"e{^ֺ[7ՑuXkH$I$I2$I$I$K fd!덬Yu7kl֨޺J$I$i0d*I$I$IUcK yGk,d qz`I$I$eTjt$I$IA͑R,` ]y#c E9E{0w]dk,`I$I$!C$I$Iz%2kM&rdw-0g.b8`8#c\j+I$I$I$I$^-,15 Pz"!N+8dk^]C-$I$I J$I$IehdlXuXU`)Qd,`lNx(Bgj\ Z$I$I4@2$I$I$K{X,`z uU N(gk'Ir3:6Ts1GkE$I$I!SI$I$IR<;+_C-}hͱyja-9LZKOX# l[c-$I$I$I$I$i& : <YxMƵfdOBZ:F0woྊ9u@7uapm;%닐$I$I$I$I$I`.]m ̛B~}Ŝ#L!t3!:#7T=O5LtSJDŽP;~ xj,OtR6rJ'U=:L%I$I$I$I$IRNN뀻MW>@0e 2݋"BXA_o Y]Cs^wNn.2$I$I$I$I$I=Ô)uj G<Ě帝cyCG(Pw֎5W=(g o{qI:L%I$I$I$I$IRn `ˀ3+֩G,BϬuoC;+d 0:VǽUU=5]|b C$I$Iޟ"I$I$IR.)%,p-p9SgqU]Q+[:j٬~CP]1ϵK$I$I$I$I$#d 8 $I$I$I$I$IR߹xbҕ7I^$I$I6iI $I$I$iӁ p`(X 8V4^I$I$m?.[GIENDB`augur-24.2.2/docs/figures/zika_example.png000066400000000000000000001313671456376326500205330ustar00rootroot00000000000000PNG  IHDR/ pHYs  ~qPLTEPNHTSKXVNGE@B@ ;n7 6^>]1[ևM5\A -#\6pW7knñ^:GOpa5;;>~xWb DR95~{.;E4fqpā#aQzhi? 7{*O..Uft?~LX40tG|a4gOsa_yν{qyqqC"?~$+h;<W$Αe$A3GⴢಀHwl0;~ +!!QN8޸@̤Lo@y%?]t4 - By5JRqQ|QƍKLnr8NZoW.@C9u8?SR9funyaUQg Yl$r;ԋ = aX7 [gOm{b[rBی:.)f]K=_.7rt8 gUn Ym7s46p{mA; 6ndMتS|p(DNN(|wqyy9~Sn_n,w{7q;nk3)K8ɶ[D=^&_ ZlsՑzE!or|>}zuapJQ{P[#D9W9~om3~6MI\p?=)qʳ׊ߠ,Wnfs[ЖwQ&SA%左v2|\n1{\{7Q]- Kk~CW!@R֩bܐmшlM*|s~3Na}FsoZ[c3Xzg[Sm%2alv}Ljz,R~g.s ϳ1}ZMǒ;)j-Θ ޽N1oضsZ#fw޴mv,.p~#vɬ=oDU&Gbz9(:)+0Pl"ϗhj) ~x꿱R8aSP\">:q]z3)%drYm#wcdv|xð L/}g7m2RdJZ1Ylvtn5o>[H+oӇkZGǺ &9)B6LwM69E{bWЈ~՛ Z Re-; J/NԖN7|^]~&whϛЦ"]1>%yR JP|/NJ mu"9IW# zdEO:} 0h.:2.haIA32snD7&5[l$g߁u_!Q]Se HWqs&7[MrN(sZ`:1&~h/wAߠ~_Wu9$~fouߑ".xt7r1 Widgsam]XXXtݲO&˷9w_Ma/Zʑ9^j=mV "NZ_lRnY-{Vp+b|CCA5Z\\z+z7~;­߉mL#`Лغ[w~; ,QM*к2c7JJrs\\)'$UeϝkU-sТע.JXwOh cǻ-Ne6rT 0"|(@8};5 Ul愰kðgg̜Ss銛^sr٨V1Ec"u3۶:ޘvb| Co( L(3FQYC_QS"|H8ߥ}H9pUw*-7k+SvI=h\aٌI| DZ>; ߝG}yM&|\yrh"EԣW@m~|CH+%Mo`pg@ڲCBy:Bv\ WRdm\pG]R$pkq*F ]tk?w|Qr(k-uЎ0ߓEivS[:=F{oZ[]MjuGU?́~K ,mIڂ[o'955|geDN0rkDgV=~ߑ\[7CCw:Px3[yc(w;юDXџm;le9Y^( C*?z<-D .S;gɪ蟳6oo@GC.vjE䆌[ h]҅B1S,G һ)w1+G7nMNK$p{f&ga4v5J)bT,uk7N1ITJw_=qqCl5q[%u z J{ĶѽVanݶߍ-1t'kG NfsOuY383ķDX r}"ߜD)Z9\WWY ~*:x+[y7C=~TZl.m5w_D;ir]U1>^nb TuN0CfJ,y*;n}C{aqޑk,^ ϶P֌Fؓ|{u8TOUEp UtYa[uY> ;EϹsCs?+~?0gtwd_!\/?0ڞog w5 n7Y$oW"r;uҙ7#|x'k `Q$TQ q||mwM[ω؇wȪ|ף\?{hul +:c¦FX e۫Rl^K._+e$odJzTrnNrAItx'ǠWO+Wǜl!G.*9wWbS!%&j4_x iEZg`/I[}>m^;Y[dˊc[Bt|qUoۋ4~^69:ȆƷ Cx$4R7ï_y˷5k 7rۗ`c}c8&y|Z&v;M׿|| O?:OhiYa]ˢݗ/cf*WG7Fl%5e^~Ǝ|?rg7&'y9W>vic:AF#'.'gt7gfY?(${POGN:ss_إ[{L=ղ TnY;r2Gqd|H$gHq|ҙǘj]jRS|S]j<^pͩҐΩs=C>a*?>*_:z_],Ƿv\w,|l|{߰=^ߝ\)/0Jq>?d|4&#rv6;%nԭ,sTe1AYl%XTrU\o_fzI|[{M~=7ȭf)jOo:~b8Dr/}`OObmf P2>Ear9\$ TCƯwwiPݍGvͩbSo0LqVPQR!C2. zBdIrMiK"jΘb#]݀/$X|È8v1#L8 ضwkoԅ݆!_IZ%5q}љEF}xRK3$?cnt@ꑪ#3zF+GbRY\PyoR3~3wS~ jZE&4Q]^CHe;΂4=xV\U;o*j#̋YL x?^3K0\V!M8>ƻ>q}IX_.:ΞƂq6TƵ=EP8^f ,D%d FUo\鑪C¥_ʋ|+?儫 $!| /ZiJgL3 |ߟ~iXI %4KbmsU"u96+dVjڼNٙ ~_,˗d`ߒ!p#11E|8X$,o0(f~b<#5mZd?{"߾:Ruo/̣ܲ0=N$)5oiJgL~jwDMl[6K|RWI=C~rufllb" =62f/)$>q~%Rs Q#FPq5 W-&7Ι?˅z갩{u^Yp%c:At)1|G 7[wW3JŮثW!v7 cfuz5 7Ci3uF߿&[$<'J>هcn0V D(Cs Kp{~ Y PGja#11F?_䋉 $Vttl]R/w_}#[9X6 ^1.7a]t*`nm |EdŦzc`A7qkI9&η !7L43 Hmo(m?EgZcע?~\-u(I|+M|w.)?X)ׁnC 6B s٬)=AjЛG29~& A|[it%3>a|NQMZ3_|F!f;C` h3*Z-$&6o(&a/ɷt-ͷw*{yrU?m~|f] uG;1R%9_\icK}Lx^ޙKHv| |pF'օh_1/;s -ʠ,݃6],7ϭ4A(#7Ƃ바N$ie[ZZnQC)kXO2,2 :ۘ^KفjZ׋jn,;"yZ=)!CEkL%aF&_CNz͎_XrZ B]qCzo_ONͩ HRjJN#f)5=\ M8[" SD ,wYAe<ȱYmf\Eaf;F\q6~kk}}D$7#Ww)q^w IDAT )iN \R"o曑cqo"Ȁc OxɢLA/Jg*oSߢ0W-NjHj2l;\67^EKЩL3d RPGnPkQ ߙ 'Z{qk \RSu<[X4ͷpd>ިMMNC'X:mMn{EaZ/bIj7@Oe粭34>ޏ+OM>P %zpL5(|{YZBEe.I):I-CT77k5wMpۚл$7<O0Hh}·C0}aj9jR G<3δ.DjV-}TR %X?mt8-#Քu$-Vn[;!̿k7u<|Ro:-C ^}4/9JWrKOߦwטּA>xTm5FxF1{Iiս恸TqkJW~Ewsw 3ල@-o3~NRVVNOMEgOOX5 l[z>?_2ɿ_b}NUFm-_P'2B$b޷d듌[N[ٝ|4=||Bn"'oͷN÷vV|tf#|3V+'mͷNƷ:2lkuJ(iu|kuII';8|eڻ /衂"ܱ_/w afqH{uڇߠY}H%Џ͒Jsd} 6Ee֯4߇TyoXd9_XK-ci=PJ80ЬԂ9ܱÓmFaznjƐ|7>GP XWX_C#jU4n|0*!r2DRdgtO o<~}=0-zqՏ**8|Gz.vKCd6^=GsG& GJo6,^+Izv"Y\X .^J~-dr S+:VT i-뗤}7 5 HZQ?oHMr0b~(AѲ(dU-۪iiVݍĊno96sc\2-VIvFuxk`&/W谋ۺOyx;hhG{a.8]ڽt/EGɦ+AW@҉y 3T69{y˖Qxca0?z٠Jܴ* N,]6 'ںpHeYT6:hEN~0,6UAXU )2(Kx*HVIҥ7yZXaTԔGAsYF!tyɵ6b~o6F(qM;6o*ZAj>Nl=I!3].͛s[FH@H1Hk] /oYzJ\B;ڲ:_Rxj!՘B-,ufԔJĽnC髢id,kj~A!bp_3fRK;8yU[N)j|hkp 1ZeZ<"Up5dPNVzzL"OWKm2kc-a[aG j{VvimLimFXeLz~%"yŃ5N4k]IdH`t=j2U`ʘ~KFu|ա{Rꁹ(Quļ| jպOt:a5Pk,ӓ4/SS*u5tPޣcoQs-<뽉sE&gm?ڎ9Z6/7lL9I}$?@mHdm9Qc7UtY~uED?eǾ֔Xtl6Q}ϟ; <=<|_m0?Klcxu3ߏA77o A|C ^e w<-?γJ{k,ш wkS;ш8}쓲q,w5/ƞhjt(|'nX|@wQo!{8/!|GFK>VS A7urjDA=vW+ '~W9s7oS];鏻.Y+R5j$][VyxN]t(|)q{%+T+hl.r,![|)aoTy icuZi]jTNoJ6D)<!humq !(v|z-J7J<O.5.u]mOߖoOeiyFodM4p-la4[6L._Hs)l1lf%,y]J[G-;L'6 ǍHqoD>Wϯ+'v.O ;af>{FlonZ`gΊܐw8FMJǞײwfj<8Ol.ϳE=yD0߽sYN;w9=z{i]|067*K/8jVF-_[8P00\nJ×o?Sql7GYesmmmz&676ܖǭ7ߕ<{A|Y.ǓʱY_ֿ:}XNs^[|[666fbC[K|m˥KCͬw-:R~-,i B |Mlyo%|t--o!)|!st3(>xrWQ\¿ogm+{+M~~m3ޏn˫wfbC;0fbR6 oA0udlMJίkm}-rg~'F?ڴ`vLl|L]l"F7^Zfw20O,RV,q0)y!Ri= }Ir׳ͳsbCK/wrۡ}WߋC7-B] y7I⽓!ߙbfU<m˿Myzf>ߩb읋oHMJ W j.B ]@G C)Ndh6ᑍ<7[EZ7{0@  <;3:K{B)4&|۔XX}.7 loEAMAMAMAMAA~|oMxNv Rnp+d>0M 9/s6| z`VΔZj?h<֭(O@`9͕6_sh{xOb^&7&konܝt|7"LlgL~/+B%y]Vl[RhD9AߩIR{5&F\b(/.Z[O:  sM2|\2qw1ܩϥS7 \y=^ ncI(؈o;'_߁f e%ixe5RWA;NnYaT7(+N>@j|-*))֭'qJ{m7xh{p߆5dss&{Ǭ'tMw?[Ҷ!Ef]!214wɚdM!r;`V!3T oM"ߧa*b&`9|CAiu*}D{~=ce|ٌ>Cc|Y!lͲn*33\$)CDa0 vvLfL+W Lŷ 8X r%v ېM;]XvNI !*orҪ8_oZ'iͨ3bsQ͒oS~x ϔ*HH_;2yt Y5<R=tT51RRUuAMW(M{i; C+FWF_;P'ۼs {z}N{y򝝈obΝtw)`R=O귵 (GPm7o=AŔoTo&Bߔo oDѨ~S~DO4oߔoߋ0o]0i|J>K!1~OB޴Iwee yͩ=J ׮Ϣ1~O7%:Ɓ 'DŽ!||./oi_t|SXcRxd>S'@hb߇)f7hrueJxېd/Vʸ.N>Q |/~s6>}}c NC1AYkMn߮\ImxwBbCEY m@2v&[ۀ֏iWPѼ]fGG? Y>ހKxyKߪOɁ)T:9 ֊2} u"2DP_2`#/.y^Y?D ~:޵Yr*lT`GV {'srTl0u >cM)ZW2o׮XY![MwN*f#.Y~s+ޚʡ5o*GN^!0A)Mn߰&K·(F* A|C!gbEZ[`U` ~@$NcF&PZ3oN >SN}K99~g{gDj&E/ (˚kX1vr{xDŽCh*KOe0^kH+C(74Th R,nQN*e27!oʻ QiA*(oV0DdKQW/coXZMxLhK;q7N+;$Lov-y8f9omR2o[/)O VNBc Ӫ~y[ᛨ]`qE㭀66{wlcE4~5x5tFlV۰$nޚ|?h[uO3?@M+?R뿟ϱ~t/~sankTmUOܸ~̞M<M6ĻwݻE_d-7{XX7Fۮ|sgEoB߬җ/x Οef#I߱5uВZ9t+x5 ,ݓ N^&%j~;ܟ?pHw)T shi-Auhi-Z)yur[/~S[ѭuKuw_Tw6WNt^yC˚ΡqR\ow nG|/~rh|D8parLe͡ethIZk}U`խ:^)')ƷJNK^+2K߱t]bl-0gL9HCВ߿GۤQawSfkU^.p\]rxԡFYMۨ?)~~fi5В99ˁzvwWWwNl~&h_[i%cq{4|+m_0z[+m\z ^8E(_=hIIժ&1~^eCthU8r^Uo3p~a;k)m&1 FA1877pHp/&HRj!ݰv^w7|Q54o^cRL4{]Hٗ #tB'>c|:97Sw&Tz`EjX |3&WЯ[.4 ]m'u_4Ρe}7cꖴۖ xQUa _Z*'RG@@'kp8(wrS>_U K"kLN4}W?az;|/!hR]Dy=::JS-6dOoEѪ4EI!Y5K1l`o3k]7!j6)x!_Oq,?<)ه7}y*nC|=w}~#I>a|NwgQ( UO}[bvͮ~(u˚ܡmmUϓ}A;ygILΏ5h!;az-VoB/_;#5\Ϫmf6N05k9g5ܧ cou=?$27oh+yxw_q 1e;N;}ҊF D\1XJ|D+M|Ä/:x4?T3?_xHX~,+XGGqW ľR&:oo} }c sLߖm[KQ~-QEFœ4}dbe(MSC>JNޅh CP 7`CZJȈoYJP['|{Ci0-Y?z㍼><?٭߇v"\"8@nM)quJR(/eUiwʷ|xpsFPZK R"=L{B>~`~ymo:~O:~߿!KP(wuRN*7|S'w{jɃj(An P8LPxYJx=~Wͦ~ߢa7wݖ~~O-b*`&;^e>.WU:H@<`!AC >µGPVR",%{|w:em5I;¬ Qݫ7Ꙟ\oGwsPXa[J@vZBT !kBV CȻ{B zsFPf)AFt{Lf~moȦ4;|&2`~kwxgիpZL$. )}EM*! r8,e{|oG~09z4Ii§ִlY:>5Tj,w]cBɪ5V^5B]=~>~CW?@2,WF\ H3۪M2>|%pPoup喛b2%M!;(keij|c&pf…z=o-8w&o]}~ߦ׉w %_ 8( Yrb5-wOWp+zS(B;nՁkSoc]Z7G7gu vܐ[P/+>-wYM|w|bP'P/ZwMۇ w#ypa W=?EM(NpQͱNVrB6X&#\Y41+SMzؙBp~o!y*p#T#!ЄX4U3 "̔E˺ư-_ j3IH}|NMYh1kѩdC|,l{Vר+5]rԬiZL'O}ao6Gd(E-Yvt[Ymt"Uͫ$}Ĭ (Ftɱ~ske}"$Ɇ,߲'ƮKoBNRL\"!%X^πʷeݖ#e1CmK%6so97~7pI-_d  %Dʟjywn?֖UZϺ6c???D~Qwsjo ] HJ#C!kfxm-Akm?>׏Mʨ.xm}y̥ L!|ôG7B^2nUXk~ӬkݾM|K?޾|~{ߣ ~;%9*w vBׅ9l99,. e.1TH$Rp̟m㼿n5kim7P?Tmmg{dׯǷ;]a|}Xɩ}|c@4A (5R#,ޣB ł /q\NIY& O3au=|cu᷃LKۓ]UӤbg\8[ ޵;#g,Cqٝ޿ ;x`'dzb?ەk-и<ܤ]ՎRpb&J\b$o %$IgҌmK|&ֿ7AoZdq/;M{PI{b_pE9W6&oNPD6Ȭgv&%X37Hf7;26nGTۿoʗb߿]߷F3 Y$bYߖL~~VrV(&N{JVč()!\ꩬmki?EeV+E5=-1ߢ_vZ޼Gŧ3FzsX7"ee%;z kc?F6cm} 3_pw|˿ma:p}+m^2&6/@r' α4ZW4G sa/I׾p$Ұ{ߛol6Ѐom5k I8eVn-wzZh/t?LCo{od6^oJw=UWdi{tH5'y~`a[Aq߾Է3F:o;*<ӫM=ಉP 9C߱&kZcbn[BjvҿSt˨# }V}vĿh?iGד `*Dk&9CS-@#:ı|v!.y|}ߣT$Q7mymFm`,o ky[XCu0c{0/*R2oxooS"w{cغG[d?_=R)v,F34;[ߞYIw]7B{$$4MvT c V6.Z^m_x$IQ\R9DNvxL9*L=_8/:߬]nckn+f5{)HPc$ہF1Po-{߬.BA͌sгi*D}};o߿}}~}h>M9Gy?I_ߔΔ6`QD8 Rvc}ϡmdNCH9:;7W;") &'4Ikˬ@Hݿ6NN7O?wt]Ix#:55h_S>R󎍏 p9ہoO;ϮDIcW?^C?/ɪ4rܦԧ1(VW˿oNOޜג+y-f^ \YD"tג!,<<iEG~aKe7J]2s(p1[ӷ:Ι(t0n~5}(ȼ2a] FdK([k'KTv\/J>ї~X8IsƿWm0q]4og:73{ 2~2a}WoA,WL$;ۋzЦvOkg^33Kډ>|/F?V(߫+++++Ic2se7/L߮S;-(zܿEd^ 2-Z,fia]h\~>o(m}-m5}jbf&Dc6ZX8KNk|-ZHf^˄B;w "fK햱6c]3y[$'6m}/-U틙PkkuLUvWwrhnl˼ek}˼;A-CXH=<e46قOYE<[iFcv:߅y-kd^2=eqCNo4#(aҷ~ޡ98aMG7>vsgc7@dKs޿^=h1\0{Q0"YzE7/=Cۻk}wwnW+5i{69vT"/U?]oqCA;[l2bk}"|.rp^}J)bM*{ܷ3m7>< >=`o}^ݻ[H9,;?4Of;),Dro[}oC/t]kQ ئ=?B?~XϘuwYo^C7xo(sD96 ҷ|L{ctrw KߐUɲr /+^𛎟Vy'?*#sr/+ʴw2}+69 9 d9[Ǐ?R~_BK#i]ՀHz:Vԋ}^e6vюRY&.?Tt),+ ty\߀Wz|&7mxxE@SL4FA' bw-|O>es@N^7bD{wolxVN}'Q V?GN(oozDiMX}o_¿8Y @()GI~nlCTp} ީIJxpS [yF!G1 E؛bѿt cҊTp}wjַ#BXgʡ~UQӧQ7^fmzƷtw=`εķ4ȲsWjLj|xگBͲ]߅awB&eɶLt" '~)m_p7q:LAG- uEE"vﰝv7DI n d ;Ѥ^.:0q֎9ڇgZ k?W,cl͓/ַ*̛^8]ZG5#GuMxX"̱ec\~U3[+t ]t3镤o)#; !G'] Tf"5kM%p*G&!懚ǫ+xui1-K=@RhB3/%}SGwXW9$?Xvt oѥ֊/]]/3=(Lo{t6l#u\VEHQy_[qt9cGх[fnx2 /r90q^g&|~h-V XwK"~[oihrtqpI ѷeхC&^.:Yb޾m? ~?h]aUϷ)4:~XR̟sƯqt!&^.: ,B8Wm]5ŮFJ>J9jׯiX~:;tnXދj"n2-g[$G]9xa"{~]xR;-ړQ5%}[o"; nj]]ef]Iouy5b[~e|tů&}l\ Qxn&_IyxT'߼yN-GnZkh>oZ~sY<% 9_{s ;d= ק/3T.nqa<%oo07x.--QEc#'6E"MCH:qKu&`{~𻶿Iu.e[w"Qc#ob4$~'oy].AvktԡBOМ \ NQ_ ٙlc~MoޓRL7 p=r0+gf7ݝfoq767_;1+ަR~s;?L61ɓ! B"}XFFBVڝb $6Ph|@ !}MV-( NmF%w5S=O\|Vʝ'O ;OlI_C_ HͯAI(%>Fy}W6˞  0= Hzdmm̆ӳ9IS͟Z~;璋wY~69^Ds08B~f :kI挿 X9] T ~j4 ~.^qi)Exyq)lN&WO7H kjM&;k@ST6 2:+uI<>m0~w[6 P̫ oy!t2 IDATͿhG- ҃j5j~[x/9z~WUѮ.~pD#0 '. N7x/P|@y>|vGG'fVK8و/p~|z.azoSLU|w%D+ &bhZ񛋅2 vύx!m$3LH0@A(hߚLz?+-՜;UR.Tm7[>i񋋋 }ըc7-ю(|Z1TB:Ϳ*ů0[94\U;=ⷩL}ߊ -aT%3WvG5ZT,T1Ux['-}HX[zYh4"/W loAoo{w~s[ vuV5U2~O;6~oywi3~3~ې8q~gl=ԏyrt{+s"nBn(yg]vhܿ4~??(u=隸ӂoiߌߌvw[?gb0_ͷ~8r*b&aq-ZKhV\7?[ۖTD{ʸa MAn+r$##Ϲ",#ro6Q\ȂS lֈW1Mq7}Kf"!;6{=aot& 㽹-7\̝nrK^"d7uh~sJP J^BЃ^U5vڥ'$BaEE}Y&ιV yՍ3 侠&0b=FvwcB6.IԼ&whe T($hŝ -l@ǖP]#pzΏ sL(?hF9'~g:4HT_0| qKd3&M}$WAgM6#~{;ozw+ hQF5E.;ӝV %![K!뻄<'0 b=?>ovcfc7Ns8H\'/73erΤyq$S0i*]?Lo.vw1/ iX/~O[@fhf߉ӓZ/XRjoٚ[8涪=MffLߌߌ/ş3}3~3~3~3}3~3~3~O]ݭ;tG]ZyV5kvoOÌߌcokAq]vѰ̆_(77p-JSo1׷k*XEgw?|8g"%y_|&ᨸ4nNol[_pj:NH6QCg\8\HU(j)ƁbNh6` Gǭa2fƉYVK# {ՑK<}ڮ_&>&oouv'>r0j\o7c.W]t0gB5n|!D>=&OKCs{7Hmq"{u~ k{[?sz^7f|}H&S-c {zGt>Ay5'C&dZjװVo.zk/.p'&{޵#i/2ox7:\t^B>M|_@t &a4i #"xAaak 9 7M~kc|hƎ3:F?toc Бc{R2j `y,4[Ռ&vGPx/۽u}:*j?<~w+Uo= oïXKϫp7M~ww{8 ?ߚ?5M|_ښ877M~k5Ea~mOo{^_=%Jp,K2˫Chd9n-;2gQʆai-'Ju\`x&׶ٰߖ>넍Q|Q^J=8D'On߲ݴr8aZ쌡1ξnai8?'.2ވ7{joX[So=osT7͠^ gJlլV3/a)Ö+-Y,P*lGp&7{z6lcSmO{ V,p=Aݽidq,g8seZQcMsؚ&O߂ov|z)bbD/ -Rs}Y)xf0\x[}[{&e{<߰Z۲duq,_V1eo-'&ϗ#UWzK{zeF=- [T- <8yV3ch8|w{oZ&O_Š=v+JoNok7@VF 7o|NoIFg( |Dž㎳2?'q/Gy&O={8:--ؕޢOHoi5'ͬv![;% ҙ\,'{% ׿a4KJ֪⍠OJJ,ˎh a7{vwo>>ߟ!{[V띍4C+=Loa 3ZW9ŵe2x7ee9[޼DŽe jQkN4iCO;hߘfl[ec\Ua1[\c̆7/ֺJUT\9߾wxHo-7Oos Jy?FXkU*v[^43J|;OVܻݽ]WyB7{֍'m8t9Me^ηDLjol[tk51+"7㛕'\&ycoۘ雷7{|/M|g7MWeoU|K0R$mUzv/9Ko$ d<.q>M|gL0e|Qlto s N N]o{7XP1.>nvb|ct=vCv!'o+rssdž޽켕n`7Sw$yuC]w2"7[=U<$o#>q[ vw$3Se~[.K* ,=&O{KU/nZҀo`ϡow:'f?rw2 M~+ko9*,C0Ǥaۣy3blv' M~ ߏ`7[g̹Z6 |cuo<$%?l6r/˵lha3@|}\n ݏP+Gs_:Ɲ#b-ȷ!_mYOJr\rM~ ǟU1>5y_sWr/J677L <'ߟb#ZR EeM7]|Gxǧ|wDӘeEJ%Јo[_:-$QY΂_de:F&ϩ؏*(w}/ [2ݿFwSo?˶)&7{+?HRU'EJ_iaX;'$n,4cV.ilN5#uIO !o};zޑҗv{ߧΑ"iIMC]7`7 n"'A-0hI b% !ʱ"]5@晤vw7 "+30gO_|zyN/ȷ8 M|~ \8z=׿}#p=mwY {wK{i%v3ʈNkY7,E%p_x<$^8 M|~Od$߂oLJUS>U;ZSY~ j*̮A5⦁=Rtۼrf6|1"҃0~n+NG׮X?~xrWb.^IX ?ߤ]6L_sꉵ_31 Nݕ~NOAoNvoS*7Ϣ=MiޭVSM=~f;t=Zr5{DJibː W x֢77cmyu\aqF:,Y Ou\(vBhB ȷŁo[&oaܻa-\w#EK'sB;mm h.L|~>~ #Vr_Ϸ‹p:#pUa i_塀80M=>:Qz\57oVk)l೘Qsy`}ށAZo'珥グd8KX2Vi|W*AYMJoݻ` B ]/ 2ơ3;+w<0Mݧ[:;嗥joYnpd0,=mDܼ=wARl<4|Ϲ~rnynow<0=] w̅*sك~t6,+t%dHZ2X1(*7?!\;DKYo*-֢1?x|[L;n,9ЌB傇Zoo e @ 1[zc'^#Xn͉&97 \0 bJ v8 /%wGl5)#u0oBYmy}:x|a$zb?t:ab)? O2%6N6S^>Z<0=wfn>"/yRep^er|^gy*-*A’8?﫺* : ^#=?0|qP^@̅:(:-[8({un;J/ -&ڕk.L|~'(}8"E%. nd2 KxPJ+ZA$YW|jj )|[ea1nA*}Llj0k ln~6B=_#bh0q7[}:fQyS\, k0B~ f|>G bH`l =Mc100#PV[FF6aߞoH<apfXTw6Gn]Nr..?$d_,!y=Lq)c'AֹK;'g-wPf /KojY.ҝq9*Bc-*,!HVu \sn]\|6Mu,q,GIu%kt%7'oQחh[!q ux)H6\>jv'w_܀rLVgSs3E|yW- iw|35|ѨlԶʋ[3[?'J' 1u?/g#E|O:j sMbs-Wk$ExyS833ŧDy1!swʒL}ɩ8Tn:>3VDUtِ|r'?q;`Qp{ @Q[d[VV$S-#= b^(Z'O\+UWWrPy )m?,豲nEYq$ br};|SN|bݓ~'pFRLx*6b_|IKKFebs}dKWNmaP}YSӯ"b3*'Gp`I%$;T9nOl26Ǡd|1_ }UJӣ9^9x% zҗ%0e/,o,ճK|+E˱`&gߝrN.KK*@Y(C0M("ߥʄz,|J.iiɂ+ppcib8m?{wOi+{D A2} F3v"S2ViOeH_G T"XY&5~,Z7߆ЃW|߁?0+,nK!)G1W&K_*wY񱃵}vg۶d9/ FYw [ˡBpL"4FKyw0dׄoχvoNi&a{M&@~/8TwBow*AϨӃJ-Y$gU6VY kZm5&d4pLo?l,U>5wbe IDATPl[,k}Ut *9wE{Iy-Z0zSWysVYx(V6$=h-&X f/W{WuяZ]R~]wbI{瓬|YW}}# ߪKG9 O!@̔c^+V$B?3o f7M3a7=_ X|y=w>s\@o ȟ?[nx,7~P//7= o޽gO'd|wP;г{ÇO>e,|C;dzo߁|#OwPvGw~oo݄K?>=~|C;fY(o5p7}.A}WW1|#H@"!Ld>d21~ |#=?O|~>=~OƷ|~oϡ|C|#~O?~ϭ~ ;_#~/~ӥJ~aG̐#!>:xOC|ysy IxoX/o{p2ˆKt|ӫ/LNPo]X% Ő,nt^<|ASV$|Yo}F#:'O%/7?+cUr@X$}>-r4N+mqS3 k0`W߈Gl8Xw:}ehѭV;*\ݺdk{uY)pw٦қmݎ ^=-jO[ZLmŷ·\,oޮ26d|K-R M͟'ζ mz_o_ģuĄMo]QhT7Y7}W"$[3_{|Je~[`:RwToy]†,m ~(;ȟpoovqYv|\ B wAB3qAόg8nGgwe6ʙ:Kl ,ߋ?~FF h=պ! g)_X 59h9759Xf.ē W7fl:dꇗI.aUxSDXSe}S.Ϥs O8lYfpښN ojۦ_:OAL7ws??Rߋ?*/߶D_:ex%ߒуn?/ߴެS=ݻ57sɟd:;[ `/R=S ~8߈gA~3Z{,GGg<r {WΙqi7wg=|s;IO@~sYwvO6v;VWUqĝbEUq|b?;ߔ ]І*bBP݇üJgFM#*K{2 lץ!|coT7T:I](ʵ\k,sŎ󄃨9 mZMяZR2Wɖ?~2GR,SyS6r>=n8N(y%xg +>Uش1'8SN1ߌe{\ޜ0o *uK&W֩j]kGWq9EPwEהus]XU^ż5{u:Y}mMQz\89P w;MLR/h*N~S.dh_l5Ro+^,Y&^֘~W~߲+N+VokW]7^y ٖfZ^\VV}Cb`w%yOSZS tܹ~gu.O6H6u:R4iWa)~[DzTɳP[#^gVH!D:#sd.q, LV;TcG?knjA 6&م=axγ}C9vv=ZC+UjRW j>Eֱͫgqxhk{w?j =v_L.v?ا^e)!S(ַ;;Z%Q:_{#UJ~ nw3ms{+햑i?׬AQ?Gllg|͞I{e{ o?ު/_ U|ċC X;I.{w#Y+F?r10k-UJA'$2-,·A_o9~YP߸~l|R-)|wmGߎw>{~hvW-|!oN;BEP77ME& *La߄K^(M2k &C_ۯyWiR9Cn _z|g.+Lt[O߅Qv1|~RhI&pöv ֦]BIfI/W}=^|?}>FCd֍V/asl6 M"-=Y |K'gler%3#lf?%IVr -xP =yFoxֈ>D;!~@] ζ9=!5Z+A.+Zl8]#.gR&e3]m̏.-C1{=߷1xS} _![2isuJff|df8h9 d*ySh'C\ks>%w 㓭_;?3IW=ا*aJ}gojEF'!Gߦ78}=O`[3<]vJlm$ Ȕ+򃎟1/g+wI&E7 #Ʒl+ 7 CsˌrҲ ok  ^ BtZSorzc#=#>bQ|_}N}No*-<7YDcj-I j |H!gy)5|X24:zn#+z=o|g&AV!lD#>{뿥$p4WJKG!-F#>b7v߸~ Fȷcb9b,HRFǞY71o- ,|b/8~w  O7p;L܇|"7 {Hj,\ *Yىu"죿'`2J|:^/${!o <+!Fm:ɣ'߷|$^E#.Ž"쥽e0Қ( o8+[EHZpr|h@hX. sN<|Tmuٖ&ߦX|w|p%dk~XD@h- /zc0Z|;'yJwwO͕a6~ p+-ώaaj[7,uH"ng#(ŀF_p/](䣘p%x{y>KJ|}c26~x{!iaafk8iD9|wIoQ §o Ǟo\_XOoF1!o7s7FoF#距T'\}mGz@o{6GMVf"73)f%7vI̖䨾i`mg+E Wn}47fŷoY]w;|9ߋ㛵{A$};f7m-9os%8uء3~NO\ѵT4HϟC?o\'*bg98,GWE",MRXBghw+lkgF Tvc's/?x;Tl($d2$|,`.VAʷp2%2I#B7Uqg%$v\m!7@~f/.3YASH DHoIonk3}X?uaWC|fVa%\)glƷ/"÷lyCGvKiMwPsft+TѺ?JnOCrl ̟!^E[+۶#ӐHg@ܑN(1L-_~O~iO{0| {֟GK{B>tKP?B c#oj@7Co^v\Q #O;,|=[߸lN~T~LϷ"|Kgf|÷}oArCcys?|?;x24 b@4F%y_nG 037eiswH*K#~yU$F#so&ő \Fgco{=77Fo7F#7.lC~g79Sz6ߖ8HluSX"ͷ|n|ϒZ}[`GkIi5k$}{*@ Ϭ5=tSFϨ/zJ6>Pu>_aB`$-م!c8{}!vòz㏭ǭN]>6\e.Jen~7{퇸`[d x7;N߰E>we_ : tFϠ7DV6ցԁ7k ex-4Se")I.;d}zʶK7 =ظcPeu[;o+@3a(iVSO[ʥ(,= g9~pKj^;;6oa kBȟVT)}:@ϑgR\ߵO(ѝm.f#r;uQ|w5co#oV6TXN:{ p]4l>.}8A#{蠗wƲK?M,pK DACgs*owD;ذl' 7ytYry\|coB-5{n0KFP-A#Q,|C{ |#o7|7F#ow:n(tow? 'U\G6%Ik';f˹ F#{kvIGۯֻ{ͿHO5 #whn2+Y|BR/)l7:GtڐO]fBT><ɟV7;^ZY>"0`7B\#m_!Dc&] ~<`oQZ&H 7;>W}B4?v~:2NYۊ0.w6  y O|# ;|ܾumwcGNLdy|UFG߿ ~^[RIJsYݬ ~C|UlRH\O|#o;ۧĕ,AF^0^+"EmpܝƪdEfZ|$"bL:Ù?NIOSao4k~ܮ%4z3@z-bd|moYem; ;owpݣ%Nb2/@J|r~&S=g A0֏o7 }o7 }ߛoINI7{_IȦ5T6~Jo%zw[Y\o9¥Ed7.v^*8K^Kz MwPc;;lFwFחPo =M2ooK4K~o2}ɹ:)o7ioo?n^W7~픸Nӷ}oQI`ρ7LomWu[%Ϳ(  ^A8fIȣGs淈  ^ 6Kў,y0 og`Ra~͚~ ~{1Se9.L춣ܨm&onMK~߯ʵTɥbmIjk)SQ#lV M~=H-K"<̱o7m{7z~'pyMӌf{DC3xʉAvIo7ost/r' ӈ]ߩXMԨlT&ޘ;0~^:OwPHkB>~~ߊ d j98k(F+iR^R$xЉWCg;}N߸?:z̢rf< ZlF~~(f~#l,|DՓBB`eIȵغa"ô"7/d(wd֏"[nM\MVyiυѷhM}D;s7;VԳTo6y}jiűH= ^w9*5ζmIx"c}X#/᝴Xو~4~MŌh o#kjF;iű owߛoGϨf80T ѷzȝwG:CTxA|/k,Q0? E`&ǒVdhMg#}\.A;sP(T [(o\P)4>5o%rBE}DqRMl]b}j I z 6}% l}}LnvcM~!f_m3 }CR>bec?Nנ;kgŬ/Be JN-d%g1T]|y^gN&&HߚgXd$o8BMj^ڞow:雙7-7٠nD+tNs8FoR[,RWśoǛ.Gޤ;Fl}3CzXf4Nj˒MI֧ x7;|L`w'YElKҷ$ˍ@`+e H"\Y."$A`ihو o ip ̋G ߠo007 }Ba|/ǚO>z.{Сmc}ܝ9e2! g_Mθ<g k?KS\~j,{B:[O׾{w3g {}w 7UϞ5/΍!S _[ KS\7g?-_-gg5qkSgo1;/9w.7=C4{7c)oPW`_`[$)>cw-QAё=67;]yꝦ}2{#?A\ l9{A_b&}+=0 :.KHhba_^%% g?;=g ;qEVOCK `?N(6мFbs`yuts}x.]^:6v/޿r\2`__) .. note:: The documentation you are viewing is Augur's reference guide, which means it is information-oriented and targeted at users who just need info about how Augur works. * If you have a question about how to achieve a specific goal with Augur, check out our :doc:`Augur-focused How-to Guides section ` in the main Nextstrain documentation. * If you want to learn the basics of how to use Augur from scratch, check out :doc:`docs.nextstrain.org:tutorials/creating-a-workflow` in the main Nextstrain documentation. * If you want to understand how Augur fits together with Auspice to visualize results, check out our :doc:`Data Formats section ` in the main Nextstrain documentation. Augur is a bioinformatics toolkit to track evolution from sequence and serological data. It provides a collection of commands which are designed to be composable into larger processing pipelines. Augur originated as part of `Nextstrain `__, an open-source project to harness the scientific and public health potential of pathogen genome data. All source code is available on `GitHub `__. Augur is composed of a series of modules and different workflows will use different parts of the pipeline. A selection of augur modules and different possible entry points are illustrated below. .. image:: figures/augur_analysis_sketch.png The canonical pipeline would ingest sequences and metadata such as dates and sampling locations, filter the data, align the sequences, infer a tree, and export the results in a format that can be visualized by auspice. In some cases, you might start with a manually curated alignment and want to start the workflow at the tree building step. Or you already have a tree inferred. In this case, you only need to feed you tree through the ``refine`` and ``export`` steps. The ``refine`` step is necessary to ensure that cross-referencing between tree nodes and meta data works as expected. The different augur modules can be strung together by workflow managers like snakemake and nextflow. The nextstrain team uses `snakemake `__ to run and manage the different analysis that you see on `nextstrain.org `__. .. toctree:: :maxdepth: 2 :caption: Table of contents :name: mastertoc :titlesonly: installation/installation usage/usage releases/releases faq/faq examples/examples api/public/index api/developer/index authors/authors augur-24.2.2/docs/installation/000077500000000000000000000000001456376326500163765ustar00rootroot00000000000000augur-24.2.2/docs/installation/installation.rst000066400000000000000000000052071456376326500216350ustar00rootroot00000000000000============ Installation ============ .. note:: This is an Augur-specific installation guide. If you wish to use Nextstrain as a whole, please refer to `the Nextstrain installation guide `__. .. contents:: :local: Install Augur ============= There are several ways to install Augur, ordered from least to most complex. .. tabs:: .. group-tab:: Nextstrain Augur is part of the Nextstrain project and is available in all :term:`Nextstrain runtimes `. Continue by following the :doc:`Nextstrain installation guide `. Once installed, you can use :doc:`cli:commands/shell` to run ``augur`` directly. .. group-tab:: Conda Augur can be installed using Conda or another variant. This assumes you are familiar with how to `manage Conda environments `__. .. code:: bash conda install -c conda-forge -c bioconda augur This installs Augur along with all dependencies. .. group-tab:: PyPI .. warning:: Installing other Python packages after Augur may cause dependency incompatibilities. If this happens, re-install Augur using the command in step 1. Augur is written in Python 3 and requires at least Python 3.8. It's published on `PyPI `__ as `nextstrain-augur `__. 1. Install Augur along with Python dependencies. .. code:: bash python3 -m pip install nextstrain-augur 2. Install other dependencies. .. include:: non-python-dependencies.rst .. group-tab:: Source .. warning:: Installing other Python packages after Augur may cause dependency incompatibilities. If this happens, re-install Augur using the command in step 1. Augur can be installed from source. This is useful if you want to use unreleased changes or develop Augur locally. 1. Install Augur along with Python dependencies. .. code:: bash git clone https://github.com/nextstrain/augur.git cd augur python3 -m pip install . .. note:: For local development, install from source in editable mode with ``dev`` dependencies. .. code:: bash python3 -m pip install -e .'[dev]' 2. Install other dependencies. .. include:: non-python-dependencies.rst Testing if it worked ==================== If installation worked, you should be able to run ``augur --help`` and see augur's primary help output. augur-24.2.2/docs/installation/non-python-dependencies.rst000066400000000000000000000020321456376326500236620ustar00rootroot00000000000000Augur uses some external bioinformatics programs that are not available on PyPI: - ``augur align`` requires `mafft `__ - ``augur tree`` requires at least one of: - `IQ-TREE `__ (used by default) - `RAxML `__ (optional alternative) - `FastTree `__ (optional alternative) - Bacterial data (or any VCF usage) requires `vcftools `__ If you use Conda, you can install them in an active environment: .. code:: bash conda install -c conda-forge -c bioconda mafft raxml fasttree iqtree vcftools --yes On macOS using `Homebrew `__: .. code:: bash brew tap brewsci/bio brew install mafft iqtree raxml fasttree vcftools On Debian/Ubuntu: .. code:: bash sudo apt install mafft iqtree raxml fasttree vcftools Other Linux distributions will likely have the same packages available, although the names may differ slightly. augur-24.2.2/docs/make.bat000066400000000000000000000014231456376326500153020ustar00rootroot00000000000000@ECHO OFF pushd %~dp0 REM Command file for Sphinx documentation if "%SPHINXBUILD%" == "" ( set SPHINXBUILD=sphinx-build ) set SOURCEDIR=. set BUILDDIR=_build if "%1" == "" goto help %SPHINXBUILD% >NUL 2>NUL if errorlevel 9009 ( echo. echo.The 'sphinx-build' command was not found. Make sure you have Sphinx echo.installed, then set the SPHINXBUILD environment variable to point echo.to the full path of the 'sphinx-build' executable. Alternatively you echo.may add the Sphinx directory to PATH. echo. echo.If you don't have Sphinx installed, grab it from echo.http://sphinx-doc.org/ exit /b 1 ) %SPHINXBUILD% -M %1 %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% goto end :help %SPHINXBUILD% -M help %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% :end popd augur-24.2.2/docs/redirects.yaml000066400000000000000000000134551456376326500165550ustar00rootroot00000000000000# Authoritative list of redirects we have configured in RTD. See the # docs.nextstrain.org repo's README.md¹ for more information on maintaining # redirects. # # ¹ https://github.com/nextstrain/docs.nextstrain.org#configuring-redirects --- - type: page from_url: /faq/augur_snakemake.html to_url: https://docs.nextstrain.org/en/latest/guides/bioinformatics/augur_snakemake.html - type: page from_url: /faq/colors.html to_url: https://docs.nextstrain.org/en/latest/guides/bioinformatics/colors.html - type: page from_url: /faq/community_hosting.html to_url: https://docs.nextstrain.org/en/latest/guides/share/community-builds.html - type: page from_url: /faq/fasta_input.html to_url: https://docs.nextstrain.org/en/latest/guides/bioinformatics/fasta_input.html - type: page from_url: /faq/import-beast.html to_url: https://docs.nextstrain.org/en/latest/guides/bioinformatics/import-beast.html - type: page from_url: /faq/lat_longs.html to_url: https://docs.nextstrain.org/en/latest/guides/bioinformatics/lat_longs.html - type: page from_url: /faq/seq_traits.html to_url: https://docs.nextstrain.org/en/latest/guides/bioinformatics/seq_traits.html - type: page from_url: /faq/translate_ref.html to_url: https://docs.nextstrain.org/en/latest/guides/bioinformatics/translate_ref.html - type: page from_url: /faq/vcf_input.html to_url: https://docs.nextstrain.org/en/latest/guides/bioinformatics/vcf_input.html - type: page from_url: /tutorials/tb_tutorial.html to_url: https://docs.nextstrain.org/en/latest/tutorials/tb_tutorial.html - type: page from_url: /tutorials/tutorials.html to_url: https://docs.nextstrain.org/en/latest/tutorials/index.html - type: page from_url: /tutorials/zika_tutorial.html to_url: https://docs.nextstrain.org/en/latest/tutorials/zika_tutorial.html - type: page from_url: /usage/augur_snakemake.html to_url: https://docs.nextstrain.org/en/latest/guides/bioinformatics/augur_snakemake.html - type: page from_url: /api/api.html to_url: /api/developer/ - type: page from_url: /api/augur.align.html to_url: /api/developer/augur.align.html - type: page from_url: /api/augur.ancestral.html to_url: /api/developer/augur.ancestral.html - type: page from_url: /api/augur.clades.html to_url: /api/developer/augur.clades.html - type: page from_url: /api/augur.distance.html to_url: /api/developer/augur.distance.html - type: page from_url: /api/augur.export.html to_url: /api/developer/augur.export.html - type: page from_url: /api/augur.export_v1.html to_url: /api/developer/augur.export_v1.html - type: page from_url: /api/augur.export_v2.html to_url: /api/developer/augur.export_v2.html - type: page from_url: /api/augur.filenames.html to_url: /api/developer/augur.filenames.html - type: page from_url: /api/augur.filter.html to_url: /api/developer/augur.filter.html - type: page from_url: /api/augur.frequencies.html to_url: /api/developer/augur.frequencies.html - type: page from_url: /api/augur.frequency_estimators.html to_url: /api/developer/augur.frequency_estimators.html - type: page from_url: /api/augur.html to_url: /api/developer/augur.html - type: page from_url: /api/augur.import.html to_url: /api/developer/augur.import.html - type: page from_url: /api/augur.index.html to_url: /api/developer/augur.index.html - type: page from_url: /api/augur.io.html to_url: /api/developer/augur.io.html - type: page from_url: /api/augur.lbi.html to_url: /api/developer/augur.lbi.html - type: page from_url: /api/augur.mask.html to_url: /api/developer/augur.mask.html - type: page from_url: /api/augur.measurements.html to_url: /api/developer/augur.measurements.html - type: page from_url: /api/augur.parse.html to_url: /api/developer/augur.parse.html - type: page from_url: /api/augur.reconstruct_sequences.html to_url: /api/developer/augur.reconstruct_sequences.html - type: page from_url: /api/augur.refine.html to_url: /api/developer/augur.refine.html - type: page from_url: /api/augur.sequence_traits.html to_url: /api/developer/augur.sequence_traits.html - type: page from_url: /api/augur.titer_model.html to_url: /api/developer/augur.titer_model.html - type: page from_url: /api/augur.titers.html to_url: /api/developer/augur.titers.html - type: page from_url: /api/augur.traits.html to_url: /api/developer/augur.traits.html - type: page from_url: /api/augur.translate.html to_url: /api/developer/augur.translate.html - type: page from_url: /api/augur.tree.html to_url: /api/developer/augur.tree.html - type: page from_url: /api/augur.util_support.color_parser.html to_url: /api/developer/augur.util_support.color_parser.html - type: page from_url: /api/augur.util_support.color_parser_line.html to_url: /api/developer/augur.util_support.color_parser_line.html - type: page from_url: /api/augur.util_support.date_disambiguator.html to_url: /api/developer/augur.util_support.date_disambiguator.html - type: page from_url: /api/augur.util_support.html to_url: /api/developer/augur.util_support.html - type: page from_url: /api/augur.util_support.node_data.html to_url: /api/developer/augur.util_support.node_data.html - type: page from_url: /api/augur.util_support.node_data_file.html to_url: /api/developer/augur.util_support.node_data_file.html - type: page from_url: /api/augur.util_support.node_data_reader.html to_url: /api/developer/augur.util_support.node_data_reader.html - type: page from_url: /api/augur.utils.html to_url: /api/developer/augur.utils.html - type: page from_url: /api/augur.validate.html to_url: /api/developer/augur.validate.html - type: page from_url: /api/augur.validate_export.html to_url: /api/developer/augur.validate_export.html - type: page from_url: /api/augur.version.html to_url: /api/developer/augur.version.html augur-24.2.2/docs/releases/000077500000000000000000000000001456376326500155005ustar00rootroot00000000000000augur-24.2.2/docs/releases/DEPRECATED.md000077700000000000000000000000001456376326500217652../../DEPRECATED.mdustar00rootroot00000000000000augur-24.2.2/docs/releases/auspice-compatibility.md000066400000000000000000000050011456376326500223160ustar00rootroot00000000000000# Compatibility between Augur & Auspice versions From mid-2019, we're changing the format of the output file produced by `augur export` to allow more flexibility going forward. This lines up with the version 2 release of `auspice` ([release notes](https://nextstrain.github.io/auspice/releases/v2)), which opens up exciting new possibilities. We also recognise that we may need to adjust things again in the future. By setting up versions now, we'll be able to continue to expand `augur` and `auspice` while minimizing disruption to users. You can get more information on how to move to using `export v2` in `augur` v6.0 in our [handy guide](migrating-v5-v6.md). ## Why does compatibility matter? To get great visualisations, the final step of the `augur` pipeline, `augur export` produces output as one or more JSON files*. The JSON(s) are then read by `auspice` to produce trees, graphs, and maps. *_This compatibility only refers to the JSON file(s) produced by `augur export`, not those produced by other `augur` steps._ Different `augur` versions will produce different JSON output formats, which in turn will work with different `auspice` versions. We aim to support backwards compatibility as much as possible, and of course, if you're you're using the latest `augur`, JSON, and `auspice` versions, everything will work smoothly! Whenever possible, we recommend updating your run to work with the latest `augur` and outputing the most recent JSON format to view with the latest `auspice` - it future-proofs your work and ensures you'll benefit from all the latest features and improvements. But, we know that for a variety of reasons, you can't always do this straight away. To help keep your research flowing, here are some tables of how different versions of `augur`, export JSONs, and `auspice` are compatible. ## Compatibility Tables **Augur** | Augur Version | Produces JSON | Works with Auspice | | ------------- |---------------| --------------------| | v5 | v1 (via `export`) | v1 & v2 | | v6 | v1 (via `export v1`)
v2 (via `export v2`) | v1 & v2 | **JSON versions** | JSON Version | Produced by Augur Version | Works with Auspice | | -------------|---------------| --------------------| | v1 (meta + tree) | v5 (via `export`)
v6 (via `export v1`)| v1 & v2 | | v2 | v6 (via `export v2`) | v2 | **Auspice** | Auspice Version | Takes JSON | | -------------|---------------| | v1 | v1 | | v2 | v1 or v2 | augur-24.2.2/docs/releases/changelog.md000077700000000000000000000000001456376326500217642../../CHANGES.mdustar00rootroot00000000000000augur-24.2.2/docs/releases/migrating-v5-v6.md000066400000000000000000000667311456376326500207010ustar00rootroot00000000000000# Migrating from augur v5 to v6 Augur is a versatile bioinformatics toolkit in its own right, but it is developed in conjunction with [Auspice](https://nextstrain.github.io/auspice), the interactive visualisation tool behind what you see on [nextstrain.org](https://nextstrain.org). Because of this, build pipelines often finish with `augur export` which produces JSONs that Auspice can visualise. As Auspice grows and improves, the format of the JSON files is changing too, to allow more functionality and flexibility. This means Augur's export function needs to change as well. This page details how the new `augur export v2` works and what you need to do to start using it. Some important points: * 'Old' JSON files (v1, made with Augur v5) still work with the new (v2) Auspice for the time being - but may not be supported in future versions. * When you upgrade to Augur v6, `augur export` will no longer work. You'll need to specify which version of Auspice (v1 or v2) your JSON files should be. --- * [Compatibility between Augur & Auspice versions](#compatibility-between-augur-auspice-versions) * [Motivation behind changing JSON formats](#motivation-behind-changing-json-formats) * [I just need my old run to work _right now_!](#i-just-need-my-old-run-to-work-right-now) * [Terminology](#terminology) * [Using command-line options to customise the visualisation](#using-command-line-options-to-customise-the-visualisation) * [Using a config file to customise the visualisation](#using-a-config-file-to-customise-the-visualisation) * [Prettifying metadata fields](#prettifying-metadata-fields) --- ## Compatibility between Augur & Auspice versions Augur v5 simply used `augur export` to produce two JSONs (tree + meta) for Auspice v1 - so we'll call these JSONs "v1" JSONs. The new Augur (v6) can still create "v1" JSONS, but can also create JSONs that work with the latest [Auspice release](https://nextstrain.github.io/auspice/releases/v2) - Auspice v2. The new format combines the tree and metadata into one JSON, which we'll call a "v2" JSON. [This page](auspice-compatibility) has the most up-to-date compatibility information between different Augur and Auspice versions. We understand how important backwards compatibility is - so for the time being "v1" JSONs will continue to work with Auspice v2. However, we recommend switching to v2 JSONs - they have more features, are easier to work with, and future versions of Auspice may not support v1 JSONs! --- ## Motivation behind changing JSON formats With the release of [Auspice v2](https://nextstrain.github.io/auspice/releases/v2), we made some breaking changes to the JSON schema. Why change formats? We were motivated by: * **Compactness**: Tree and Meta JSON files are now combined, so you only have to worry about one output file * **Flexibility**: The new v2 JSONs allow us flexibility to include more features and data, and will let us move towards getting in line with existing conventions like GFF and BibTex * **Ease of use**: Users commonly got confused by the 'config' file. For basic runs you can now specify everything you need to see your data right in the command-line - no 'config' file needed! For more advanced exports, you can still specify a config file with more detail. (See "[Using a Config File](#using-a-config-file-to-customise-the-visualisation)") --- ## I just need my old run to work _right now_! We completely understand you may not have time to make the change right this second, and that there's nothing more frustrating than having a run break right before a presentation or deadline! If you want to keep using the old version _for now_, replace `augur export` with `augur export v1` - everything else remains the same. You can use Auspice v1 or Auspice v2 (see [compatibility](auspice-compatibility)). To use the new version, use `augur export v2`. You'll need to make a few small changes, but you'll be future-proofing your runs. _(Future you will thank past you!)_ --- ## What needs changing to use `augur export v2`? > _Helpful hint: You can always get a full overview of the arguments for export v2 with `augur export v2 --help`_ ### What's the same You still pass in your tree, metadata, and node-data files with `--tree`, `--metadata`, and `--node-data` - just like in `export v1`. Similarly, you can pass in files containing colors, latitude, and longitude data using `--colors` and `--lat-longs`, respectively. ### Different outputs Instead of specifying two output files (`--output-tree` and `--output-meta`) you now only need to specify one with `--output`. For example, if your old files were `auspice/virus_AB_tree.json` and `auspice/virus_AB_meta.json`, you might want to call the single output `auspice/virus_AB.json` - or if you want to tell it apart from your v1 export, you might call it `auspice/virus_ABv2.json`. To export the reference sequence relative to which mutations have been identified, specify the `--include-root-sequence` flag. This flag writes a JSON whose name is relative to the stem of the main output JSON. For VCF input, this file will contain the reference sequence to which the VCF is mapped. For example, if the main output is called `auspice/virus_AB.json`, the root sequence will be saved to `auspice/virus_AB_root-sequence.json`. ### Other changed arguments The `--tree-name` argument has been removed, as auspice v2 no longer uses this. See [the auspice docs](https://nextstrain.github.io/auspice/advanced-functionality/second-trees) for more information about how second trees are specified and displayed. ### Command Line Options instead of (or in addition to) a config file One of the biggest changes in `augur export v2` is that you can pass much more in using the command-line, meaning 'config' files are no longer required. The 'config' or 'Auspice config' file defines a number of visualisation settings such as title, default displays, and which colorings to use. However, it's been a source of pain for many users! Many of these things can now be passed in by the command-line, but some options are only possible using the config file. You can always continue to put most things in the config file if you prefer. If you want to use a [config file](#using-a-config-file-to-customise-the-visualisation), you can pass this in with `--auspice-config`, but the format of this has changed (see the link). It's important to note that generally _any command line options you use will override the same option in your config file_. ### Coloring traits is smarter Previously, anything you wanted to color by had to be in the config file. You always had to include a "gt" and "num_date" entry, and remember to add anything new to the file. We've made this smarter - `augur export v2` now automatically detects some traits and you can specify others on the command line. You can also control the color options in more detail using a config file. We'll cover how coloring works on the [command line](#id1) and how it works in [config files](#colorings) in more detail below. ### Traits display exactly how you want Previously, auspice tried to make traits and locations look 'pretty' by auto-capitalizing them and removing underscores (which were required in multi-word traits). Auspice no longer does this for v2 JSONS, so you'll need to ensure your traits look exactly how you want them to display in auspice. You can read more about that [here](#prettifying-metadata-fields). --- ## Terminology #### Traits Traits is the general term for certain data associated with nodes in the tree, for example "country", "serotype", or "age". These may have been inferred for internal nodes by Augur functions like `augur traits` (confusingly named!) and `augur clades`, or they may only be available for tips and provided by the metadata TSV file. ### Geographic Traits Certain traits have a geographic interpretation, e.g. "country". Auspice will attempt to display these traits on a map (and provide a drop-down to switch between them if there are more than one). > _Make sure that these have corresponding entry in the lat-longs TSV file supplied to `export`. See how to do this [here](https://docs.nextstrain.org/en/latest/guides/bioinformatics/lat_longs.html)._ --- ## Using command-line options to customise the visualisation As mentioned above, you can now replace most of the functionality of the "Auspice config" file with command line options. We hope that for most users this means the config file isn't necessary (but it's always there is you need its advanced functionality). > Remember that generally _any command line options you use will override the same option in your config file_. ### Title Set the title displayed by Auspice via `--title` (previously this was the "title" field in your v1 config file). If running directly from the command line, put your title in quotes (ex: `--title "Phylodynamics of my Pathogen"`). If you are using Snakemake and passing the value using `params`, you'll need to double-quote the title using single and double quotes. For example: ```python params: title = "'Phylodynamics of my Pathogen'" shell: "augur export v2 --title {params.title} ..." ``` ### Maintainers The maintainer(s) are displayed in the footer of Auspice and may have associated links. These can be specified with `--maintainers` and you can now have more than one maintainer associated with your run. Previously this was set by the "maintainer" field in your v1 config file and was limited to a single entry. If running directly from the command line, put each maintainer in quotes (ex: `--maintainers "Jane Doe" "Ravi Kupra"`). If you have a URL associated with a maintainer (completely optional), then you can add them like so: ``` --maintainers "Jane Doe " "Ravi Kupra If you want to display the frequencies panel, you must specify "frequencies" _and_ ensure a tip frequency file is available for `auspice` to access. ### Traits _([What's a trait?](#traits))_ Traits will become coloring options in Auspice. Some are automatically included, and some can be defined on the command line. The following rules are followed for which traits will be exported: 1. Genotype and date (if present) are always automatically included as coloring options - you don't need to include them. _(Previously these were "gt" and "numdate" in the "color_options" section of your v1 config file.)_ 2. Traits contained in the node-data JSONs handed to `augur export` (using `--node-data`) will automatically be included. These are often generated from the Augur commands `traits`, `clades` or `seqtraits`. 3. Traits present in the metadata file can be included by specifying them with `metadata-color-by` (e.g: `--metadata-color-by country age host`). _(These must match column names of your metadata file.)_ The changes hopefully make things a little easier to use -- previously, if you had run `augur clades`, you had to remember to add `clade_membership` to the config file, and if you'd run `augur seqtraits` you had to add every resulting option. Now, they'll be automatically included. If you don't want them as a coloring option, don't pass in the files. > _Note: You can't specify the title or type of a colouring option using just command-line - but `export v2` will make its best guess using the following rules:_ _Excluding missing data, if a trait contains only 'True', 'False', 'Yes', 'No', '0' or '1', it will be set to 'boolean.'_ _If it contains only numbers (integers and/or decimals), it will be set to 'continuous.'_ _Otherwise, it will be set as 'discrete.'_ _If you want to have more control over how your trait is interpreted, you should use a config file (see [below](#using-a-config-file-to-customise-the-visualisation))._ ### Geographic Traits Specify these traits using `--geo-resolutions`, e.g. `--geo-resolutions country region`. Previously these were defined by the "geo" field in your v1 config file. ### What's not possible to set without a config file The command line arguments cover everything you need to get a basic run working in `augur` and `auspice`. However, there are still some features that offer more options or are only available when you use a config file. Currently, using command line arguments: * It is not possible to set the default view options using only command-line arguments in `export v2`. You can read more about the defaults (and how to change them using a config file) [here](#display-defaults). * When using `export v2` with only command-line arguments, every trait that's a coloring option and is either categorical or boolean will automatically be available to filter by. Find out how to specify what is a filter using a config file [here](#filters). --- ## Using a config file to customise the visualisation Traditionally you had to use an "Auspice config file" to customise the visualisation. This is still available as an option, but you can now choose between exporting using just the command-line, or using a combination of the command-line and config file. >_Anything you can specify using the command-line arguments above can be done using a config file instead._ This section will detail the config file provided to `augur export v2` by the `--auspice-config` argument. The format of the new config file **differs slightly** from previous versions of Augur. If you try to use a previous version of the config file it _should mostly_ still work, but will print out warnings where keys have changed. ### Config file priority It is important to remember that if you set an option both in the config file _and_ in the command line, **the command line option will override the config file option**. For example, if you set `"title"` in your config file as "A Title About Apples", and then import this config file using `--auspice-config` _and_ use `--title "Better Title Befitting Bears"`, the title displayed by Auspice will be "Better Title Befitting Bears". To use the one in the config file, don't use `--title` in the command line. There are a couple of exceptions to this: * There is no way to set default display views using command line only, so using "display_defaults" in your config file will set this. * There is no way to modify the default filters displayed when using command line only, so using "filters" in your config file will set this. * If you set color-by options in command-line using `--metadata-color-by` _and_ pass in a config file, only the things listed in `--metadata-color-by` will be coloring options, but if they have a 'title' and 'type' set in the config file, these will be used. ### Config file format The config file is a JSON file, and as such it's important that everything in your config file is enclosed in one pair of curly brackets. These can be on a separate line at the very top and very bottom of your file. Syntax is important - if you are getting errors, ensure all your brackets and quotation marks match up, and that commas separate items in the same pair of brackets. Export v2 config files are generally very similar to export v1, _but there are a few changes_. They are explained in detail below, or you can see [an example of converting a v1 config to v2](#updating-your-config-file). For more details, see [the complete JSON schema for v2 config files](https://github.com/nextstrain/augur/blob/master/augur/data/schema-auspice-config-v2.json). Here are the top-level keys of the config JSON in plain English: #### title The title to be displayed by Auspice, unchanged from previous versions of the config file. E.g. `"title": "Phylodynamics of my Pathogen"`. #### maintainers You can now have more than one maintainer associated with your run! Specify one or as many maintainers as you wish via the following structure (`url`s are optional): ``` "maintainers": [ {"name": "Jane Doe", "url": "www.janedoe.com"}, {"name": "Ravi Kupra", "url": "www.ravikupra.co.uk"} ] ``` Previously this was the "maintainer" field in your v1 config file and used a different structure. #### build-url The build / repository URL to be displayed by Auspice, a new functionality in `augur export v2`, e.g. `"build_url": "https://github.com/nextstrain/zika"`. This is an optional field. #### panels Optional and unchanged from previous versions of the config file, this defines the panels that Auspice will display. If not set, Auspice will by default try to show the tree, map, and entropy panels, if data is available. Options are "tree", "map", "entropy", and "frequencies" (e.g: `"panels": ["tree", "map"]`). > If you want to display the frequencies panel, you must specify "frequencies" _and_ ensure a tip frequency file is available for `auspice` to access. #### colorings These are a list of the traits which Auspice should display as options to color the tree & map. In previous versions of the config file this was "color_options" and the current structure is similar, but hopefully easier to understand! For each trait you include, you can define: * A required "key", which is used to lookup the values via node-data JSONs or other provided metadata. * An optional "title" which will shown by Auspice when referring to this trait -- for instance you may have a trait called "ab1" which you want to show as "Age bracket 1" in the drop-down menus, legend, and filter. * An optional, but highly recommended "type" which can be either 'ordinal', 'boolean', 'continuous', or 'categorical'. If you don't provide a type, augur will try to guess it (see how it guesses [here](#id1)). Unless you want to change the name displayed, you _no longer_ need to include `gt`, `num_date`, `clade_membership`, or `augur seqtraits` output (like clade or drug resistance information) in your config file - if that information is present, it will automatically be included. To exclude it, don't pass in the corresponding file to `--node-data`. > _Remember that if you are using `--metadata-color-by` on the command-line, only the traits given there will be color-by options!_ _To include everything in your config file, don't use `--metadata-color-by`, but include all traits you want as coloring options in "colorings" in the config file._ >_Put another way, if a trait is listed in `--metadata-color-by` and not in the config, it will be included._ _If a trait is in the config but not in `--metadata-color-by` it will be excluded._ _If a trait is in both, but has `"title"` and `"type"` information in the config file, this information _will_ be used by export v2._ In short, if using a config file and the command line, ensure everything you want as a coloring option is in `--metadata-color-by`. You only need to also include it `"colorings"` in the config file if you want to set the `"title"` and/or `"type"`. #### geo_resolutions This specifies the geographical traits you want Auspice to use. You can pass this in the same way as in the v1 config file, or you can now specify a title to be displayed by option, using a slightly different structure. For example, for many users, these might be "country" and "region", i.e. `"geo_resolutions: ["country", "region"]`. If you want to give them new titles, use the format `"geo_resolutions": [{"key": "country", "title": "Areas"}, {"key": "region", "title": "Global"}]`. You can also mix the two, if you just want a title for one location: `"geo_resolutions": [ {"key": "country", "title": "Areas"}, "region"]` #### filters This specifies which traits you can filter by in Auspice. E.g. `"filters": ["country", "region", "symptom", "age"]`. If you don't include this option in your config file, all non-continuous traits that are coloring options will be included as filters. If you don't want any filter options, include this option with an empty list, i.e. `"filters": []`. This is the same as the "filters" field in previous config files, but the behavior has changed slightly. #### display_defaults This allows you to specify the default view that users will see when they visualise the data in Auspice. There are five options you can set here -- note they are similar to those in the previous config files but we have now standardised them to snake_case: * `geo_resolution` - Sets which of the "geo_resolutions" should be shown. _Default is 'country'_ * `color_by` - Sets what trait should be used for coloring. _Default is 'country'_ * `distance_measure` - Sets whether tree branch lengths are in 'time' or 'divergence'. Options are `num_date` (time, default if available) or `div` (divergence). * `layout` - Sets how the tree is visualised. Options are `rect` (rectangular, default), `radial`, `unrooted`, and `clock`, corresponding to the four options normally shown on the left in Auspice. * `map_triplicate` - Sets whether the map is extended / wrapped around, which can be useful if transmissions are worldwide. Set to `true' or 'false'. _Default 'false'_ ### Config file examples Here is an example of how all of the above options would fit into a config file: ```json { "title": "Phylodynamics of my Pathogen", "maintainers": [ {"name": "Jane Doe", "url": "www.janedoe.com"}, {"name": "Ravi Kupra", "url": "www.ravikupra.co.uk"} ], "build_url": "https://github.com/nextstrain/zika", "colorings": [ { "key": "age", "title": "Host age", "type": "continuous" }, { "key": "hospitalized", "type": "boolean" }, { "key": "country", "type": "categorical" }, { "key": "region", "type": "categorical" } ], "geo_resolutions": [ {"key":"country", "title": "Areas"}, "region" ], "panels": ["tree", "map"], "filters": ["country","region","symptom","age"], "display_defaults": { "color_by": "symptom", "geo_resolution": "region", "distance_measure": "div", "map_triplicate": "true" } } ``` If you want some examples of the new config files used in practice, you can see some in these builds: * _TO DO_ ### Updating your config file It's fairly easy to convert old export v1 config files to work with export v2. Here's an export v1 config file on the left, and an export v2 config file on the right. We've tried to line them up to highlight the differences:
Export v1 config:
{
  "title": "Phylodynamics of Virus A",
  "color_options": {
    "gt": {
      "menuItem": "genotype",
      "legendTitle": "Genotype",
      "type": "discrete",
      "key": "genotype"
    },
    "num_date": {
      "menuItem": "date",
      "legendTitle": "Sampling date",
      "type": "continuous",
      "key": "num_date"
    },
    "age": {
      "menuItem": "Host age",
      "legendTitle": "Host Age (years)",
      "type": "continuous",
      "key": "age"
    },
    "host": {
      "menuItem": "Animal",
      "legendTitle": "Animal",
      "type": "discrete",
      "key": "host"
    },
    "country": {
      "type": "discrete"
    },
    "region": {
      "type": "discrete"
    },
    "clade_membership":{
      "menuItem": "Clade",
      "legendTitle": "Clade",
      "type": "discrete",
      "key": "clade_membership"
    }
  },
  "geo": [
    "country",
    "region"
  ],
  "maintainer": [
    "Hanna Kukk, Mohammad Fahir",
    "http://vamuzlab.org"
  ],
  "filters": [
    "country", "region"
  ],
  "defaults": {
    "layout": "unrooted",
    "colorBy": "age"
  }
}
    
Export v2 config:
{
  "title": "Phylodynamics of Virus A",
  "colorings": [











{ "key": "age",
"title": "Host age",
"type": "continuous"
}, { "key": "host",
"title": "Animal",
"type": "categorical"
}, { "key": "country",
"type": "categorical" }, { "key": "region",
"type": "categorical" }





], "geo_resolutions": [ "country", "region" ], "maintainers": [ {"name": "Hanna Kukk", "url": "http://vamuzlab.org"}, {"name": "Mohammad Fahir", "url": "http://mfahir.co.uk"} ], "filters": [ "country", "region" ], "display_defaults": { "layout": "unrooted", "color_by": "age" } }
### Vaccine choices In previous versions of augur, certain strains could be defined in the config file as `vaccine_choices` (auspice would display this as a cross over the tip in the tree). This functionality is now specified via a node-data JSON (see the v6 release notes). ## Prettifying metadata fields In Auspice v1, we automatically 'prettified' many metadata values. For example, a country value of 'new_zealand' would display as 'New Zealand', and a metadata column called 'age_range' would display as 'Age Range'. This worked well most of the time, but meant that users couldn't intentionally keep underscores or lower-case values. It also meant we had to detect exception cases like turning 'usa' into 'USA' rather than 'Usa'. In Auspice v2, all values are now displayed exactly as they arrive, allowing users to ensure every gene and abbreviation displays just as it should. However, this means that you should ensure your data looks exactly how you'd like it to display - change any 'new_zealand's in your metadata to 'New Zealand'! Don't forget to also change them in any custom lat-long and/or coloring files you are using. We've also become stricter about the format of the files that pass in color and lat-long information. Previously, it didn't matter if columns were separated by spaces or tabs - now, they must be separated by tabs. You can find out more about how to add [custom coloring](https://docs.nextstrain.org/en/latest/guides/bioinformatics/colors.html) and [lat-long](https://docs.nextstrain.org/en/latest/guides/bioinformatics/lat_longs.html) values. If you use the command `parse` to generate a metadata table from fields in a fasta header, you can use the flag `--prettify-fields` to apply some prettifying operations to specific metadata entries, see the documentation [`parse`](/usage/cli/parse). augur-24.2.2/docs/releases/releases.rst000066400000000000000000000011451456376326500200360ustar00rootroot00000000000000========================== Augur Releases & Upgrading ========================== To make an omelette, you have to break some eggs. To keep improving and adding to ``augur`` and ``auspice``, we sometimes have to break old code! We know these kinds of changes can be really frustrating for users - things that used to work suddenly don't. Finding out what went wrong and learning what you need to change should be as pain-free as possible. .. toctree:: :maxdepth: 1 :glob: Changelog Deprecated features v6 migrating-v5-v6 auspice-compatibility augur-24.2.2/docs/releases/v6.md000066400000000000000000000137551456376326500163700ustar00rootroot00000000000000# Augur v6 Release Notes Augur v6 was released on 2019-12-10. This release contains a number of changes from Augur v5, including feature additions and bugfixes. The biggest change is related to how Augur _exports_ files for visualisation by [Auspice](https://nextstrain.github.io/auspice/). We've written [an extensive guide](migrating-v5-v6) explaining our motivations here, what has changed, how to upgrade, and how this interfaces with Auspice. --- * [Export JSONs for specific versions of Auspice](#export-jsons-for-specific-versions-of-auspice) * [Reference sequence output](#reference-sequence-output) * [Change in `augur ancestral`'s arguments](#change-in-augur-ancestrals-arguments) * [Import BEAST MCC trees](#import-beast-mcc-trees) * [Prettifying of strings](#prettifying-of-strings) * [Whitespace in colors and lat-longs TSVs](#whitespace-in-colors-lat-longs-tsvs) * [Move to GFF-style annotations](#move-to-gff-style-annotations) * [Improvements and usage of JSON validation](#improvements-usage-of-json-validation) * [Removal of non-modular Augur and old builds](#removal-of-non-modular-augur-old-builds) * [Test builds](#test-builds) * [Documentation improvements](#documentation-improvements) * [Miscellaneous](#miscellaneous) ## Export JSONs for specific versions of Auspice Probably the biggest (breaking) change you'll encounter is that `augur export` no longer works! See the [migration guide](migrating-v5-v6) for a detailed explanation of this. Breaking change: `augur export` no longer works, and now requires a further positional argument to define which version of Auspice you wish to target. `augur export v1` should behave the same as previous versions' `augur export`. ## Reference sequence output The export command now accepts a flag to export the reference/root sequence relative to which mutations are called, see [here](migrating-v5-v6.html#different-outputs) for more detail. ## Change in `augur ancestral`'s arguments `augur ancestral`, which reconstructs mutations across a tree, now supports two forms of output and the arguments have become more descriptive. 1. JSON output, including mutations for each branch and (inferred) ancestral sequences. This is specified by the `--output-node-data` argument. 2. FASTA output of reconstructed ancestral sequences. This had previously been available for VCF-inputs, but now works for any input. Users can ask for this output and specify a file name using `--output-sequences`. Deprecation warning: The argument `--output` is now deprecated. Please use `--output-node-data` instead. ## Import BEAST MCC trees We now have instructions and functionality to import BEAST trees, see [here](https://docs.nextstrain.org/en/latest/guides/bioinformatics/import-beast.html). ## Prettifying of strings Previous auspice version "prettified" metadata strings (like changing 'north_america' to 'North America'). Auspice v2 no longer does this, see [here](migrating-v5-v6.html#prettifying-metadata-fields) for more detail. The `parse` command now accepts and argument to apply string prettifying operations to metadata parsed from fasta headers. ## Whitespace in colors and lat-longs TSVs To allow whitespace in metadata, files specifying colors and geographic locations now need to be TAB delimited. ## Move to GFF-style annotations Starting with Augur v6 we now use GFF coordinates: [one-origin, inclusive] as opposed to BED coordinates. Strands are represented by `+` or `-` rather than `1` or `0`. Additionally, we export the `seqid`, but don't use it in Auspice. ## Improvements and usage of JSON validation The export command will now validate the produced JSON against the schema. ## Removal of non-modular Augur and old builds Augur has been a dynamic, shapeshifting beast. It started as scripts for Nextflu, took on more and more pathogens, was refactored into "prepare" and "process" steps, and refactored again into the "modular" Augur we now have. Earlier incarnations of Augur have now been removed from the GitHub repo (`./base/*`). Paralleling the different incarnations of Augur was a move to "builds" being their own self-contained repos. We think this has been remarkably successful, and de-couples the bioinformatics tooling from a pathogen build. With this release of Augur we've now removed these builds from the Augur GitHub repo, and the only builds that remain are the test ones. ## Test builds There have been a number of test builds in the Augur repo and we have leaned heavily on them while we developed this version of Augur as well as Auspice v2. They are all self contained within `./tests/builds` and can all be run and examined in Auspice via ```bash cd tests/builds bash runner.sh # creates output in ./auspice auspice view --datasetDir auspice ``` (See the [Auspice docs](https://nextstrain.github.io/auspice) for Auspice-specific questions.) ## Documentation improvements Documentation has always been a bit hit-or-miss with Nextstrain projects. We've tried to make Augur's read-the-docs documentation more comprehensive, with better flow. This entails new sections, with each Augur command having its own page. We've tried to use redirects to ensure that all the old links continue to work. ## Miscellaneous * `augur filter`: More interpretable output of how many sequences each stage has filtered out. * `augur filter`: Additional flag `--subsample-seed` to seed the random number generator and thereby make subsampling reproducible. * `augur sequence-traits`: Numerical output as originally intended, but required an Auspice bugfix. * `augur traits`: Explanation of what is considered missing data & how it is interpreted. * `augur traits`: GTR models are exported in the output JSON for better accountability & reproducibility. * Errors in formatting of input files (e.g. metadata files, Auspice config files) weren't handled nicely, often resulting in hard-to-interpret stack traces. We now try to catch these and print an error indicating the offending file. * Tests using Python version 2 have now been removed. augur-24.2.2/docs/usage/000077500000000000000000000000001456376326500150015ustar00rootroot00000000000000augur-24.2.2/docs/usage/augur_snakemake.md000066400000000000000000000052141456376326500204670ustar00rootroot00000000000000## Augur and snakemake The output of one augur command serves as input to the next and hence these commands need to be executed in order. This is a common pattern in bioinformatics and multiple tools -- so called workflow managers -- exist to facilitate this. Within nextstrain, we have relied on [Snakemake](https://snakemake.readthedocs.io/en/stable/). Snakemake breaks a workflow into a set of rules that are specified in a file called `Snakefile`. Each rule takes a number of input files, specifies a few parameters, and produces output files. A simple rule would look like this: ```python rule filter: input: sequences = "data/sequences.fasta", metadata = "data/metadata.tsv" output: sequences = "results/filtered.fasta" params: min_date = 2012 shell: """ augur filter \ --sequences {input.sequences} \ --metadata {input.metadata} \ --output {output.sequences} \ --min-date {params.min_date} """ ``` This rule would produce `results/filtered.fasta` from the input files `data/sequences.fasta` and `data/metadata.tsv` using the `augur filter` command. Note that we explicitly specify what is an input and what is an output file. To filter our data, we would now call snakemake as ```bash snakemake --cores 1 results/filtered.fasta ``` and snakemake will run the same command as specified above. So far, this is just a complicated reformulation of what we did above, but the benefit of workflow management becomes clear once we add more steps. The next natural step in our phylogenetic pipeline is aligning the filtered sequences and we define a rule `align`. ```bash rule align: input: sequences = rules.filter.output.sequences, reference = "config/zika_outgroup.gb" output: alignment = "results/aligned.fasta" shell: """ augur align \ --sequences {input.sequences} \ --reference-sequence {input.reference} \ --output {output.alignment} """ ``` If you now want to generate the alignment, you can type ```bash snakemake --cores 1 results/aligned.fasta ``` and snakemake will * determine that `results/aligned.fasta` is an output of rule `align` * check whether all required input files are in place and run the necessary rules if not * run rule `align` and check whether the file `results/aligned.fasta` appeared. If you supply a reference sequence to `augur align`, augur will include that reference sequence in the alignment and strip all insertions relative to that reference. This will guarantee a consistent reference coordinate system and genome annotation later on. augur-24.2.2/docs/usage/cli/000077500000000000000000000000001456376326500155505ustar00rootroot00000000000000augur-24.2.2/docs/usage/cli/align.rst000066400000000000000000000002101456376326500173650ustar00rootroot00000000000000=========== augur align =========== .. argparse:: :module: augur :func: make_parser :prog: augur :path: align augur-24.2.2/docs/usage/cli/ancestral.rst000066400000000000000000000014511456376326500202570ustar00rootroot00000000000000=============== augur ancestral =============== .. contents:: :local: .. argparse:: :module: augur :func: make_parser :prog: augur :path: ancestral Example Node Data JSON ====================== Here's an example of the output node-data JSON where ``NODE_1`` has no mutations compared to it's parent and ``NODE_2`` has multiple mutations. .. code-block:: json { "nodes": { "NODE_1": { "muts": [], "sequence": "TCCAAACAAAGT..." }, "NODE_2": { "muts": [ "A4461G", "A6591G", "A9184C", "A10385T", "T15098C" ], "sequence": "TCCAAACAAAGT..." } } } augur-24.2.2/docs/usage/cli/clades.rst000066400000000000000000000002141456376326500175320ustar00rootroot00000000000000============ augur clades ============ .. argparse:: :module: augur :func: make_parser :prog: augur :path: clades augur-24.2.2/docs/usage/cli/cli.rst000066400000000000000000000011331456376326500170470ustar00rootroot00000000000000=========================== Augur subcommands =========================== You'll find documentation for all the augur subcommands below. We're in the process of adding examples and more extensive documentation for each command, but at a minimum each subcommand will contain autogenerated documentation similar to that seen by running ``--help``. .. toctree:: :maxdepth: 1 parse curate/index index filter mask align tree refine ancestral translate reconstruct-sequences clades traits sequence-traits lbi distance titers frequencies export validate version import measurements augur-24.2.2/docs/usage/cli/curate/000077500000000000000000000000001456376326500170335ustar00rootroot00000000000000augur-24.2.2/docs/usage/cli/curate/format-dates.rst000066400000000000000000000002201456376326500221450ustar00rootroot00000000000000============ format-dates ============ .. argparse:: :module: augur :func: make_parser :prog: augur :path: curate format-dates augur-24.2.2/docs/usage/cli/curate/index.rst000066400000000000000000000016701456376326500207000ustar00rootroot00000000000000================== augur curate ================== This suite of commands is intended to help users curate their metadata for Nextstrain analyses. Each subcommand is designed to be tightly scoped to a single type of data transformation so curation pipelines can be easily customized. All subcommands share the same input and output options so a curation pipeline can begin with any subcommand and the output can be directly piped to any other curate subcommand. .. note:: If you need to parse metadata from a FASTA headers, please continue to use :doc:`augur parse `. The output metadata TSV and FASTA files can then be used as inputs for any augur curate subcommand. You'll find documentation for all augur curate subcommands below. We will continue to add more subcommands as we identify other common data curation tasks. .. toctree:: :maxdepth: 1 normalize-strings titlecase format-dates passthru augur-24.2.2/docs/usage/cli/curate/normalize-strings.rst000066400000000000000000000002441456376326500232540ustar00rootroot00000000000000================= normalize-strings ================= .. argparse:: :module: augur :func: make_parser :prog: augur :path: curate normalize-strings augur-24.2.2/docs/usage/cli/curate/passthru.rst000066400000000000000000000002001456376326500214260ustar00rootroot00000000000000======== passthru ======== .. argparse:: :module: augur :func: make_parser :prog: augur :path: curate passthru augur-24.2.2/docs/usage/cli/curate/titlecase.rst000066400000000000000000000002241456376326500215400ustar00rootroot00000000000000================= titlecase ================= .. argparse:: :module: augur :func: make_parser :prog: augur :path: curate titlecase augur-24.2.2/docs/usage/cli/distance.rst000066400000000000000000000003061456376326500200730ustar00rootroot00000000000000============== augur distance ============== .. contents:: Table of Contents :local: ---- .. argparse:: :module: augur :func: make_parser :prog: augur :path: distance augur-24.2.2/docs/usage/cli/export.rst000066400000000000000000000004311456376326500176210ustar00rootroot00000000000000============ augur export ============ .. note:: The behavior of ``augur export`` has changed in v6. Please see `here <../../upgrading/migrating-v5-v6.html>`__ for more details. .. argparse:: :module: augur :func: make_parser :prog: augur :path: export augur-24.2.2/docs/usage/cli/filter.rst000066400000000000000000000050511456376326500175700ustar00rootroot00000000000000============ augur filter ============ .. contents:: Table of Contents :local: ---- .. argparse:: :module: augur :func: make_parser :prog: augur :path: filter How we subsample sequences in the zika-tutoral ============================================== As an example, we'll look that the ``filter`` command in greater detail using material from the :doc:`Zika tutorial `. The filter command allows you to selected various subsets of your input data for different types of analysis. A simple example use of this command would be .. code-block:: bash augur filter --sequences data/sequences.fasta --metadata data/metadata.tsv --min-date 2012 --output filtered.fasta This command will select all sequences with collection date in 2012 or later. The filter command has a large number of options that allow flexible filtering for many common situations. One such use-case is the exclusion of sequences that are known to be outliers (e.g. because of sequencing errors, cell-culture adaptation, ...). These can be specified in a separate file: .. code-block:: bash BRA/2016/FC_DQ75D1 COL/FLR_00034/2015 ... To drop such strains, you can pass the name of this file to the augur filter command: .. code-block:: bash augur filter --sequences data/sequences.fasta \ --metadata data/metadata.tsv \ --min-date 2012 \ --exclude config/dropped_strains.txt \ --output filtered.fasta (To improve legibility, we have wrapped the command across multiple lines.) If you run this command (you should be able to copy-paste this into your terminal) on the data provided in the :doc:`Zika tutorial `, you should see that one of the sequences in the data set was dropped since its name was in the ``dropped_strains.txt`` file. Another common filtering operation is subsetting of data to a achieve a more even spatio-temporal distribution or to cut-down data set size to more manageable numbers. The filter command allows you to select a specific number of sequences from specific groups, for example one sequence per month from each country: .. code-block:: bash augur filter \ --sequences data/sequences.fasta \ --metadata data/metadata.tsv \ --min-date 2012 \ --exclude config/dropped_strains.txt \ --group-by country year month \ --sequences-per-group 1 \ --output filtered.fasta This subsampling and filtering will reduce the number of sequences in the tutorial data set from 34 to 24. augur-24.2.2/docs/usage/cli/frequencies.rst000066400000000000000000000002401456376326500206070ustar00rootroot00000000000000================= augur frequencies ================= .. argparse:: :module: augur :func: make_parser :prog: augur :path: frequencies augur-24.2.2/docs/usage/cli/import.rst000066400000000000000000000002411456376326500176110ustar00rootroot00000000000000=========================== augur import =========================== .. argparse:: :module: augur :func: make_parser :prog: augur :path: import augur-24.2.2/docs/usage/cli/index.rst000066400000000000000000000031521456376326500174120ustar00rootroot00000000000000============ augur index ============ .. contents:: Table of Contents :local: ---- .. argparse:: :module: augur :func: make_parser :prog: augur :path: index Speed up filtering with a sequence index ======================================== As we describe in :doc:`the zika tutorial `, augur index precalculates the composition of the sequences (e.g., numbers of nucleotides, gaps, invalid characters, and total sequence length) prior to filtering. The resulting sequence index speeds up subsequent filter steps especially in more complex workflows. .. code-block:: bash mkdir -p results/ augur index \ --sequences data/sequences.fasta \ --output results/sequence_index.tsv The first lines in the sequence index look like this. .. code-block:: bash strain length A C G T N other_IUPAC - ? invalid_nucleotides PAN/CDC_259359_V1_V3/2015 10771 2952 2379 3142 2298 0 0 0 0 0 COL/FLR_00024/2015 10659 2921 2344 3113 2281 0 0 0 0 0 PRVABC59 10675 2923 2351 3115 2286 0 0 0 0 0 COL/FLR_00008/2015 10659 2924 2344 3110 2281 0 0 0 0 0 We then provide the sequence index as an input to augur filter commands to speed up filtering on sequence-specific attributes. .. code-block:: bash augur filter \ --sequences data/sequences.fasta \ --sequence-index results/sequence_index.tsv \ --metadata data/metadata.tsv \ --exclude config/dropped_strains.txt \ --output results/filtered.fasta \ --group-by country year month \ --sequences-per-group 20 \ --min-date 2012 augur-24.2.2/docs/usage/cli/lbi.rst000066400000000000000000000002001456376326500170400ustar00rootroot00000000000000========= augur lbi ========= .. argparse:: :module: augur :func: make_parser :prog: augur :path: lbi augur-24.2.2/docs/usage/cli/mask.rst000066400000000000000000000002041456376326500172310ustar00rootroot00000000000000========== augur mask ========== .. argparse:: :module: augur :func: make_parser :prog: augur :path: mask augur-24.2.2/docs/usage/cli/measurements.rst000066400000000000000000000002331456376326500210100ustar00rootroot00000000000000================== augur measurements ================== .. argparse:: :module: augur :func: make_parser :prog: augur :path: measurements augur-24.2.2/docs/usage/cli/parse.rst000066400000000000000000000034321456376326500174160ustar00rootroot00000000000000=========== augur parse =========== .. contents:: Table of Contents :local: ---- .. argparse:: :module: augur :func: make_parser :prog: augur :path: parse Example: how to parse metadata from fasta-headers ================================================= If you download sequence data from data bases like GISAID or fludb, there often is an option to include meta data such as dates into the header of fasta files. This might for example look like this: .. >A/Canoas/LACENRS_1793/2015|A|H3N2|07/17/2015||Brazil|Human|KY925125 ATG... >A/Canoas/LACENRS_773/2015|A|H3N2|05/06/2015||Brazil|Human|KY925599 ATG... [...] The fasta header contains information such as influenza lineage, dates (in an unpreferred format), country, etc... To turn this metadata into a table, augur has a special command called `parse`. A rule to parse the above file could look like this: .. code-block:: python rule parse: input: sequences = "data/h3n2_ha.fasta" output: sequences = "results/sequences_h3n2_ha.fasta", metadata = "results/metadata_h3n2_ha.tsv" params: fields = "strain type subtype date season country host accession" shell: """ augur parse \ --sequences {input.sequences} \ --fields {params.fields} \ --output-sequences {output.sequences} \ --output-metadata {output.metadata} \ --fix-dates monthfirst """ Note the additional argument ``--fix-dates monthfirst``. This triggers an attempt to parse these dates and turn them into ISO format assuming that the month preceeds the date in the input data. Note that this is a brittle process that should be spot-checked. augur-24.2.2/docs/usage/cli/reconstruct-sequences.rst000066400000000000000000000003141456376326500226440ustar00rootroot00000000000000============================= augur reconstruct-sequences ============================= .. argparse:: :module: augur :func: make_parser :prog: augur :path: reconstruct-sequences augur-24.2.2/docs/usage/cli/refine.rst000066400000000000000000000127321456376326500175570ustar00rootroot00000000000000=========================== augur refine =========================== .. contents:: Table of Contents :local: ---- .. argparse:: :module: augur :func: make_parser :prog: augur :path: refine How we use refine in the zika tutorial ====================================== In the Zika tutorial we used the following basic rule to run the `refine` command: .. code-block:: python rule refine: input: tree = rules.tree.output.tree, alignment = rules.align.output, metadata = "data/metadata.tsv" output: tree = "results/tree.nwk", node_data = "results/branch_lengths.json" shell: """ augur refine \ --tree {input.tree} \ --alignment {input.alignment} \ --metadata {input.metadata} \ --timetree \ --output-tree {output.tree} \ --output-node-data {output.node_data} """ This rule will estimate the rate of the molecular clock, reroot the tree, and estimate a time tree. The paragraphs below will detail how to exert more control on each of these steps through additional options the refine command. Specify the evolutionary rate ============================= By default ``augur`` (through ``treetime``) will estimate the rate of evolution from the data by regressing divergence vs sampling date. In some scenarios, however, there is insufficient temporal signal to reliably estimate the rate and the analysis will be more robust and reproducible if one fixes this rate explicitly. This can be done via the flag ``--clock-rate `` where the implied units are substitutions per site and year. In our zika example, this would look like this .. code-block:: diff rule refine: input: tree = rules.tree.output.tree, alignment = rules.align.output, metadata = "data/metadata.tsv" output: tree = "results/tree.nwk", node_data = "results/branch_lengths.json" + params: + clock_rate = 0.0008 shell: """ augur refine \ --tree {input.tree} \ --alignment {input.alignment} \ --metadata {input.metadata} \ --timetree \ + --clock-rate {params.clock_rate} \ --output-tree {output.tree} \ --output-node-data {output.node_data} """ Confidence intervals for divergence times ========================================= Divergence time estimates are probabilistic and uncertain for multiple reasons, primarily because the accumulation of mutations is a probabilistic process and the rate estimate itself is not precise. Augur/TreeTime will account for this uncertainty if the refine command is run with the flag ``--date-confidence`` and the standard deviation of the rate estimate is specified. .. code-block:: diff rule refine: input: tree = rules.tree.output.tree, alignment = rules.align.output, metadata = "data/metadata.tsv" output: tree = "results/tree.nwk", node_data = "results/branch_lengths.json" params: clock_rate = 0.0008, + clock_std_dev = 0.0002 shell: """ augur refine \ --tree {input.tree} \ --alignment {input.alignment} \ --metadata {input.metadata} \ --timetree \ --date-confidence \ + --clock-rate {params.clock_rate} \ + --clock-std-dev {params.clock_std_dev} \ --output-tree {output.tree} \ --output-node-data {output.node_data} """ If run with these parameters, augur will save an confidence interval (e.g. ``[2014.5,2014.7]``) for each node in the tree. By default, augur runs TreeTime in a "covariance-aware" mode where the root-to-tip regression accounts for shared ancestry and covariance between terminal nodes. This, however, is sometimes unstable when the temporal signal is low and can be switch off with the flag ``--no-covariance``. Specifying the root of the tree =============================== By default, augur/TreeTime reroots your input tree to optimize the temporal signal in the data. This is robust when there is robust temporal signal. In other situations, you might want to specify the root explicitly, specify a rerooting mechanisms, or keep the root of the input tree. The latter can be achieved by passing the argument ``--keep-root``. To specify a particular strain (or the common ancestor of a group of strains), pass the name(s) of the(se) strain(s) like so: .. code-block:: bash --root strain1 [strain2 strain3 ...] Other available rooting mechanisms are * ``least-squares`` (default): minimize squared deviation of the root-to-tip regression * ``min-dev``: essentially midpoint rooting minimizing the variance in root-to-tip distance * ``oldest``: use the oldest strain as outgroup Polytomy resolution =================== if the data set contains many very similar sequences, their evolutionary relationship some times remains ambiguous resulting in zero-length branches or polytomies (that is internal nodes with more than 2 children). Augur partially resolves those polytomies if such resolution helps the make the tree fit the temporal structure in the data. If this is undesired, this can be switched-off using ``--keep-polytomies``. augur-24.2.2/docs/usage/cli/sequence-traits.rst000066400000000000000000000002741456376326500214210ustar00rootroot00000000000000=========================== augur sequence-traits =========================== .. argparse:: :module: augur :func: make_parser :prog: augur :path: sequence-traits augur-24.2.2/docs/usage/cli/titers.rst000066400000000000000000000002141456376326500176110ustar00rootroot00000000000000============ augur titers ============ .. argparse:: :module: augur :func: make_parser :prog: augur :path: titers augur-24.2.2/docs/usage/cli/traits.rst000066400000000000000000000021261456376326500176110ustar00rootroot00000000000000============ augur traits ============ .. contents:: Table of Contents :local: ---- .. argparse:: :module: augur :func: make_parser :prog: augur :path: traits What about missing data? ======================== If you have strains with missing data and you want them to be reconstructed, then you must give them the value ``?``. For example, if you are running a reconstruction of ``country`` and you don't know the country for a particular strain, you should set country to ``?`` in the metadata file for that strain. Then, ``traits`` will estimate the most likely ``country`` value for any strains where you have provided ``?``. If you do not want these traits to be reconstructed (you would like it to remain clear that the ``country`` is unknown for this sample), then simply leave this field blank in the metadata file. Note that each value -- empty strings, ``NA``, ``unknown``-- will be interpretted as a valid value! So, it's best to be consistant with whatever you use for missing values, or those with ``NA`` will be shown as different from those with ``unknown``! augur-24.2.2/docs/usage/cli/translate.rst000066400000000000000000000033201456376326500202750ustar00rootroot00000000000000=============== augur translate =============== .. contents:: :local: .. argparse:: :module: augur :func: make_parser :prog: augur :path: translate Example Node Data JSON ====================== Here's an example of the output node-data JSON where ``NODE_1`` has no mutations compared to it's parent and ``NODE_2`` has multiple mutations in multiple genes. .. code-block:: json { "annotations": { "GENE_1": { "end": 1685, "seqid": "reference.gb", "start": 108, "strand": "+", "type": "CDS" }, "GENE_2": { "end": 2705, "seqid": "reference.gb", "start": 1807, "strand": "+", "type": "CDS" }, }, "nodes": { "NODE_1": { "aa_muts": [] }, "NODE_2": { "aa_muts": [ "GENE_1": [ "S139N", "R213K", "R439G", "V440A", "D474N", "S479W", "S481T", "P485L", "R521K" ], "GENE_2": [ "P43S", "D46N", "C64R", "R98K", "D136G", "M175V" ] ] } }, "reference": { "GENE_1": "MATLLRSLAL...", "GENE_2": "MAEEQARHVK..." } } augur-24.2.2/docs/usage/cli/tree.rst000066400000000000000000000002041456376326500172350ustar00rootroot00000000000000========== augur tree ========== .. argparse:: :module: augur :func: make_parser :prog: augur :path: tree augur-24.2.2/docs/usage/cli/validate.rst000066400000000000000000000002241456376326500200710ustar00rootroot00000000000000============== augur validate ============== .. argparse:: :module: augur :func: make_parser :prog: augur :path: validate augur-24.2.2/docs/usage/cli/version.rst000066400000000000000000000002201456376326500177610ustar00rootroot00000000000000============= augur version ============= .. argparse:: :module: augur :func: make_parser :prog: augur :path: version augur-24.2.2/docs/usage/envvars.rst000066400000000000000000000017661456376326500172310ustar00rootroot00000000000000===================== Environment variables ===================== Augur's behaviour can be globally modified by the values of some specific environment variables. These can be especially useful in the context of an entire pipeline or workflow which uses Augur, as the environment variables can be set once for all Augur commands at the start of the pipeline. ``AUGUR_MINIFY_JSON`` Boolean. If set to a non-empty value, all JSON output produced by Augur will be minified by omitting indentation and newlines. Minifying the JSON will substantially reduce file sizes, which is helpful for large, deeply nested trees. ``AUGUR_RECURSION_LIMIT`` Integer. If set to a non-empty value, the Python recursion limit will be set to the given value early in Augur's execution by calling :func:`sys.setrecursionlimit`. Generally there is no need to set this environment variable. You may need to if you find yourself encountering :class:`RecursionError` while processing a very unbalanced tree. augur-24.2.2/docs/usage/json_format.md000066400000000000000000000036041456376326500176470ustar00rootroot00000000000000# Format of augur output Many augur commands output additional annotations and inferences made for nodes of the tree. These data are stored as json files which serve as input to subsequent steps and the export step that combines all these annotations into a file for visualization. The files output by different steps follow a common format: ```json { "alignment": "results/aligned.fasta", "input_tree": "results/tree_raw.nwk", "clock": { "intercept": -2.2139560216719905, "rate": 0.0011001967850769103, "rtt_Tmrca": 2012.3272960820566 }, "nodes": { "1_0087_PF": { "branch_length": 0.0001694424712162532, "clock_length": 0.0001694424712162532, "date": "2013-12-31", "mutation_length": 0.00027877777449324505, "numdate": 2013.9993155382122, "raw_date": "2013-12-XX" }, "1_0181_PF": { "branch_length": 0.00009101896681161861, "clock_length": 0.00009101896681161861, "date": "2013-12-31", "mutation_length": 0.0001858351915513057, "numdate": 2013.9993155382122, "raw_date": "2013-12-XX" }, "NODE_0000030": { "branch_length": 0.0006468897126106284, "clock_length": 0.0006468897126106284, "date": "2016-06-06", "mutation_length": 0.0010229321826899364, "numdate": 2016.4318911009404 } } } ``` The json structure has one mandatory top-level field called `nodes` that contains inferences made for each node, possibly including internal nodes. For that purpose, it is essential that internal nodes are consistently named. The latter are assigned unique names starting with `NODE_` in the `refine` step and it is crucial that the topology and rooting of the tree remains untouched thereafter. In addition to the mandatory `nodes` field, the json can contain additional information on the analysis performed, for example input parameters or other inferences such as the clock model. augur-24.2.2/docs/usage/usage.rst000066400000000000000000000024661456376326500166470ustar00rootroot00000000000000=========== Using Augur =========== Augur consists of a number of tools that allow the user to filter and align sequences, infer trees, and integrate the phylogenetic analysis with meta data. The different tools are meant to be composable and the output of one command will serve as the input of other commands. All of Augur's commands are accessed through the ``augur`` program followed by the name of the command, e.g. ``augur ancestral`` to infer ancestral sequences. Each command requires at least one input file and will produce one or more output files following the pattern .. code-block:: bash augur ancestral --tree my_tree.nwk --alignment my_alignment.fasta --output-node-data ancestral_sequences.json Most commands admit additional arguments to modify how the analysis is run. Each command is documented below, and we are continually adding more examples to each command and providing real-life examples of their usage. For instance, the documentation for `augur filter <./cli/filter.html>`__ shows how we use this to subsample the `nextstrain zika analysis `__. `Note that you can also run each command with the` ``--help`` `option, for example` ``augur tree --help``, `for more information at the command-line.` .. toctree:: :maxdepth: 2 cli/cli json_format envvars augur-24.2.2/mypy.ini000066400000000000000000000023221456376326500144430ustar00rootroot00000000000000[mypy] # Don't set python_version. Instead, use the default behavior of checking for # compatibility against the version of Python used to run mypy. files = augur/ # Require functions with an annotated return type to be explicit about # potentially returning None (via Optional[…]). strict_optional = False # In the future maybe we can contribute typing stubs for these modules (either # complete stubs in the python/typeshed repo or partial stubs just in # this repo), but for now that's more work than we want to invest. These # sections let us ignore missing stubs for specific modules without hiding all # missing errors like (--ignore-missing-imports). [mypy-treetime.*] ignore_missing_imports = True [mypy-isodate.*] ignore_missing_imports = True [mypy-Bio.*] ignore_missing_imports = True [mypy-BCBio.*] ignore_missing_imports = True [mypy-matplotlib.*] ignore_missing_imports = True [mypy-seaborn.*] ignore_missing_imports = True [mypy-cvxopt.*] ignore_missing_imports = True [mypy-ipdb.*] ignore_missing_imports = True [mypy-jsonschema.*] ignore_missing_imports = True [mypy-pyfastx.*] ignore_missing_imports = True [mypy-networkx.*] ignore_missing_imports = True [mypy-scipy.*] ignore_missing_imports = True augur-24.2.2/paper/000077500000000000000000000000001456376326500140545ustar00rootroot00000000000000augur-24.2.2/paper/Makefile000066400000000000000000000005271456376326500155200ustar00rootroot00000000000000all : paper.pdf paper.pdf : paper.md paper.bib example-modular-augur-workflows.pdf pandoc --citeproc --bibliography=paper.bib --template template.tex -s $< -o $@ # example-modular-augur-workflows.pdf : example-modular-augur-workflows.dot # dot -Tpdf $< > $@ clean : # rm -f paper.pdf example-modular-augur-workflows.pdf rm -f paper.pdf augur-24.2.2/paper/README.md000066400000000000000000000007551456376326500153420ustar00rootroot00000000000000# Augur manuscript ## Setup ``` bash conda create -n augur-manuscript graphviz pandoc conda activate augur-manuscript ``` ## Compile manuscript Use pandoc to compile the paper. ```bash make ``` Alternately, use [JOSS's Docker image to compile the paper](https://joss.readthedocs.io/en/latest/submitting.html#docker) from this `paper` directory. ``` bash docker run --rm \ --volume $PWD:/data \ --user $(id -u):$(id -g) \ --env JOURNAL=joss \ openjournals/paperdraft ``` augur-24.2.2/paper/example-modular-augur-workflows.dot000066400000000000000000000143101456376326500230330ustar00rootroot00000000000000digraph G { graph[margin=1]; subgraph cluster_zika_snakemake_dag { graph[bgcolor=white, color=white, margin=0, center=true, label="A ", labeljus=left, labelloc=top, fontsize=20, size=2.25]; node[shape=box, style=rounded, fontname=sans, fontsize=12, penwidth=2]; edge[penwidth=2, color=grey]; z1[label = "export", color = "0.0 0.0 0.0", style="rounded"]; z2[label = "refine", color = "0.0 0.0 0.0", style="rounded"]; z3[label = "traits", color = "0.0 0.0 0.0", style="rounded"]; z4[label = "ancestral", color = "0.0 0.0 0.0", style="rounded"]; z5[label = "translate", color = "0.0 0.0 0.0", style="rounded"]; z6[label = "tree", color = "0.0 0.0 0.0", style="rounded"]; z7[label = "align", color = "0.0 0.0 0.0", style="rounded"]; z8[label = "filter", color = "0.0 0.0 0.0", style="rounded"]; z2 -> z1 z3 -> z1 z4 -> z1 z5 -> z1 z6 -> z2 z7 -> z2 z2 -> z3 z2 -> z4 z7 -> z4 z2 -> z5 z4 -> z5 z7 -> z6 z8 -> z7 } subgraph cluster_tb_snakemake_dag { graph[bgcolor=white, color=white, margin=0, center=true, label="B ", labeljus=left, labelloc=top, fontsize=20, size=2.25]; node[shape=box, style=rounded, fontname=sans, fontsize=12, penwidth=2]; edge[penwidth=2, color=grey]; t1[label = "export", color = "0.0 0.0 0.0", style="rounded"]; t2[label = "refine", color = "0.0 0.0 0.0", style="rounded"]; t3[label = "traits", color = "0.0 0.0 0.0", style="rounded"]; t4[label = "ancestral", color = "0.0 0.0 0.0", style="rounded"]; t5[label = "translate", color = "0.0 0.0 0.0", style="rounded"]; t6[label = "seqtraits", color = "0.0 0.0 0.0", style="rounded"]; t7[label = "clades", color = "0.0 0.0 0.0", style="rounded"]; t8[label = "tree", color = "0.0 0.0 0.0", style="rounded"]; t9[label = "mask", color = "0.0 0.0 0.0", style="rounded"]; t10[label = "filter", color = "0.0 0.0 0.0", style="rounded"]; t2 -> t1 t3 -> t1 t4 -> t1 t5 -> t1 t6 -> t1 t7 -> t1 t8 -> t2 t9 -> t2 t2 -> t3 t2 -> t4 t9 -> t4 t2 -> t5 t4 -> t5 t4 -> t6 t5 -> t6 t2 -> t7 t5 -> t7 t4 -> t7 t9 -> t8 t10 -> t9 } subgraph cluster_beast{ graph[bgcolor=white, color=white, margin=0, center=true, label="C ", labeljus=left, labelloc=top, fontsize=20, size=2.25]; node[shape=box, style=rounded, fontname=sans, fontsize=12, penwidth=2]; edge[penwidth=2, color=grey]; b1[label = "BEAST", color = "red", style="rounded"]; b2[label = "import beast", color = "0.0 0.0 0.0", style="rounded"]; b3[label = "traits", color = "0.0 0.0 0.0", style="rounded"]; b5[label = "export", color = "0.0 0.0 0.0", style="rounded"]; b1 -> b2 b1 -> b5 b2 -> b5 b2 -> b3 b3 -> b5 } subgraph ncov_pipeline { graph[bgcolor=white, ranksep=0.1, color=white, margin=0, center=true, label="D ", labeljus=left, labelloc=top, fontsize=20, size=2.25]; node[shape=box, style=rounded, fontname=sans, fontsize=10, penwidth=1, height=0.25]; edge[penwidth=1, color=grey]; 0[label = "finalize", color = "royalblue", style="rounded"]; 1[label = "incorporate_travel_history", color = "royalblue", style="rounded"]; 2[label = "tip_frequencies", color = "0.0 0.0 0.0", style="rounded"]; 3[label = "export", color = "0.0 0.0 0.0", style="rounded"]; 4[label = "colors", color = "royalblue", style="rounded"]; 5[label = "refine", color = "0.0 0.0 0.0", style="rounded"]; 6[label = "download", color = "royalblue", style="rounded"]; 7[label = "ancestral", color = "0.0 0.0 0.0", style="rounded"]; 8[label = "translate", color = "0.0 0.0 0.0", style="rounded"]; 9[label = "rename_legacy_clades", color = "royalblue", style="rounded"]; 10[label = "rename_subclades", color = "royalblue", style="rounded"]; 11[label = "clades", color = "0.0 0.0 0.0", style="rounded"]; 12[label = "recency: global", color = "royalblue", style="rounded"]; 13[label = "traits", color = "0.0 0.0 0.0", style="rounded"]; 14[label = "tree", color = "0.0 0.0 0.0", style="rounded"]; 15[label = "combine_samples", color = "royalblue", style="rounded"]; 16[label = "legacy_clades", color = "0.0 0.0 0.0", style="rounded"]; 17[label = "subclades", color = "0.0 0.0 0.0", style="rounded"]; 18[label = "clade_files: global", color = "royalblue", style="rounded"]; 19[label = "subsample", color = "0.0 0.0 0.0", style="rounded"]; 20[label = "mask", color = "0.0 0.0 0.0", style="rounded"]; 21[label = "refilter", color = "0.0 0.0 0.0", style="rounded"]; 22[label = "aggregate_alignments", color = "royalblue", style="rounded"]; 23[label = "diagnostic", color = "royalblue", style="rounded"]; 24[label = "partition_sequences", color = "royalblue", style="rounded"]; 25[label = "filter", color = "0.0 0.0 0.0", style="rounded"]; 1 -> 0 2 -> 0 3 -> 0 3 -> 1 4 -> 1 5 -> 2 6 -> 2 5 -> 3 6 -> 3 7 -> 3 8 -> 3 9 -> 3 10 -> 3 11 -> 3 12 -> 3 13 -> 3 4 -> 3 6 -> 4 14 -> 5 15 -> 5 6 -> 5 5 -> 7 15 -> 7 5 -> 8 7 -> 8 16 -> 9 17 -> 10 5 -> 11 8 -> 11 7 -> 11 18 -> 11 6 -> 12 5 -> 13 6 -> 13 15 -> 14 19 -> 15 5 -> 16 8 -> 16 7 -> 16 5 -> 17 8 -> 17 7 -> 17 20 -> 19 6 -> 19 21 -> 20 22 -> 21 6 -> 21 23 -> 21 24 -> 22 22 -> 23 6 -> 23 25 -> 24 6 -> 25 } } augur-24.2.2/paper/example-modular-augur-workflows.pdf000066400000000000000000001233031456376326500230210ustar00rootroot00000000000000%PDF-1.3 % 4 0 obj << /Length 5 0 R /Filter /FlateDecode >> stream xK$Gr+ z?t#WF1A&[΂X )X}33#{zh Hۿ=]?l7_?nweq{s\ct?_n㖋_G+H[+c*~{p<Ǖ8oOEFq7?>^~|/k'>o (ݻ-֍y`FN-c!m|?n_m?iwbJ+PkOBÏn?.:{^ ̜^mW%P7Ppy߶ڂ8Kt2`ӡ.o]͂m^X04^0&_]_mrn,0/{xD;26.?13G6'n=7tLӍQ` -;d`0y1;n?5l[!Lt^PdEhN Xbrȿ1;\vXgU ϭ,kҽʺo_a{6|er!nOew+"kaÑ"I^A:"[-}?n:Oh3|Ռ$nmv?Xxl~{?]/}{~ `w}:A?ol]fp7קiwd?3٢C^tzoxy:!@s:,b7n]6xL;+XggFJ`ն>ںgi"Cet5_25iW\ ^ߏ֙E9`7rz*In>q|9pu(ټ;0 mBD+_8Dvm6qgk͘rMrpoӎM/#. ><{?,kOK72HR_EMu=BvtdkO8kpuGHE)Դ! pfw+d~Xbm:н4V$:L:2DG- egt»9:.;a h4hwM1{N;rϮ&nmMe=F ^GT!W Ň7JNJ#5z}^Q%ʇҳ  >" cwn TnB6MpJjM֜MXV4g㏛c"mwY y41eiCrz!'ʚ/;)eMj6ĩ@<^::Ck,R[K/ % iuaJ=$T_2 A# V!JzF'cv rۥ;VWhd!p2}nA&cvhg#v &d5J8Qx>($ܣxzOǛ~Z>a;@/Og -`P~wހmKSMg&"3Gʦ#.Htb[#C3<QwwJ}_˰{^,=vgr6$VڷDaHmg1ihGGo>qaNH}m,zœN 50I`p@>"c GX +1uwYl< }(<}Fֶ qhf“Y|M^6{9umemÐA]k`u \ٴDZY [x rL)="-7?9٫]( 茲rt#/ؑ(Eb1L-yּC0*Ѣ. \mzBYj{d& v q vђOSlYrlhudxxU҂h[xEdyymFCVuʼ [VYG+5Hvjsmz;nv$:΁vAuX;$dyw ,.]4ToL΃(E \vuZG0G@. kicAki{>UcW+jb }-ml~L^a2Z6T\p Xk!z/_:s?&ZsIDW-쎡 KͯxD 5Ǫ߱/pۍedҝ0 |@rm`D爘_$x7"nj@6X1/][`:~]w^+&sR : `0WL}bov#'03o@ Oh4@sN3~;?|?`I dz ,~lş$=r۳0bM>b0rع_χ 'vp\̔p ݏ# ;բO"q+>c_;0/$`aX(|4Ůnue4i_gtQ ui$GVK|cْ=DžZ9pUOS=jZ'z 0BLѭ0P7' ;bAt DNW. 2% + @ 9Ǎkj :8aiw?Dh8~'T ܱ5}]K ?]c!^`G"]# 9hA[ B`᳁!UokvEd!)p7꒾cD Al\m܆<m6ծ.|n\DTt+}w=2bM:3A;0?:}a$q!eeKvaM̈́@oN!(mbzH&K^4cMAj RԻ3'l "\+̃!idȃa^A<1SM%m1yuq?N/83ѩ }IJHd/]]/$j0e*Q3IG:6@m 1gnLUƁ߮y8X)0%s7>yC5@ݷ18O ba7#=Y6I-?c+REmIoE@S$A ?wt%h6 =H3:H\zJ@Qz'>aG(aXFOWb=ۖ;S11_28-$h\X:541$_#^^#H&!ǫ|nwEcțtݟ ʛcq^Cdb 06jb' yӺ1x%y2dǛL'[c&4y#zYq9E!EVN h/ XŰc/QtxRϚ9u͛ c(:D[ekFT 70UD aJ-Rn O^e +.+ʌY'Y @Ŕ |W|qne %3R6+xbx<6 5TCSw3{Vvء` P r I@H}ސ2O q@ ïM(霦/h6}+M+52݉Za_w\ L&  a D f 2t|JKx1=PbqESY44髻oTyXWR4#25⊨~e!`0m| |P1?a>)rh0Vd<\o$6I"_gv Y7S H΅yJ|\y!\< <@LP7S$<آ M/e<׮ P#{1osN00CP qw5 f DAѻ]e}rHL`:V5HA*/2i +H_zR)>tv !%hzăb e| +}Y$.W-̸YbRd6YNFx@>;/+cnYAՋadk|bI@4|NgqպueOFLlt{o.42MX)ےTA0l+;!+#!A_a!bai"CxAG%"Ѕ=ȫP} Jg3Snė>;'!P; C߃¤Xe }bSsO&z X*R7UB!#C_A(muܗmdog!T*sYV"BwM5pR WT>]8Z[=*RXz6f5,JԜOe6vЅ%V0~^ᡊeyI[,'-cy/BIh)gQYlWi۴gAGv >vU*AZڀ`vMM_]6U& yJy B`wm]#Y'V0{Yj)`xme& -(AO`]5 Nbvi]m]FqY tJ u{eE؎v+H RiTﵬuRI& /Dx5eEz:w5鮲.fB0R>(n :>0@0b>/R$=Ϝԧ.7&7 AY6bLi:$# #¾ь -(إA  FH[&iݺp}=391MX vc6uL@S-\La*Em@S@rIB57Iȃ4B$4I4Cj%1Eke#iZ`*֛G/@C9'xoV^ٽ&8 I!ЫMiƖАq zvwZgpQrq(TѪĦPm#[.> @+I3X!t,A@?ԙfmqv.BmT6~1219j1w(p KIf%!wH7pdpv.kP3XA$67> },78s3 7ZGB4$cM0º*dnl|2*E'tX9 Rnři 9#NV2\*\1 to6j?51  Q1Q՛|"o-`fb\ $*FjK[ξCHq*,Bw c)|_0 (΂/zE7NWbs}HRÑ!uwCdDP8?o&1W#^iOႪejQ(-2[kZXV7@geW2oDlx pܤS#]oGK~zL|dEOu@'?Z[Fsv$fc>3z^bu;#5ױL4#͋=4AG=4 7nհO+oՊ'| @P>D/E$8`J5d!O_G9Z 8sM5Xݨ-`Jhv(ŞFLIQOE݀^EmLi`A+GRj4XY?o]L DgB8&} p1) &`Ӗ"նir5oGA7[:Yef vlpZF) bl0P&,۞˧+ iP4锲U~0 -vm†wJg\b^b^iyҋ]y_'#kttp5a@R)FK6Iڅa 0!Kmh"wG@F44]:gٛX!Ծ_D$i2EB{ DiC-־ KdݔH*3$f':1&8`V9Yq "n{Hz)$qKTP o&-_7e$IH9 +ΫEF4 ! NG̣mhDef_0XymbYQ,&FʥPΞ = U0aXa X2a $P9LC8vJ(a dZ`wɮŖX /t{I6ᛄ XL6&&̞I;&6)9TȆGe>S^wY%$F/&m_F&ϵS<}7 cޚGXWJ7 H7Uؖ6ZL%w\8 NXDTLifp5, z@dS:5`#JSPĩ.j4* G kX2 *b8QPl =we͏C1O㄂ 0& @2O`$J?*P- ;0:!^'1\=P>E佡7t4/ xjwNID;0@Eէer'DKD]I0$ ׅPOyV|o4hxM(jMjNf<dn?|XO b^: HJY 4-){l%d,g N!Wŭ4jEWbVDžp3Kдv' [IN6j4 ]ĄщY8h?bQ&==t>' A JI}RWD3H\ZڔS^-}q?ޓ$|݀"Kj0e2mW"ݬS΁zBёʞ Crvpw؛v~J%.˴8F;b6ݞQ<[ٿ~z0L9DŽl:А XrMGCtsV%t0S)~$@HŠb#^`'c>P5F bc1l*I,AdܑC򵂔](΢ e1ʁ" ߅zm FYYIvP?eiPAQ Q٬@ *}Qy}A `` 0PڷDÎu5223mb5ȩ 7JFHã$0PT#ĂiZohdvU,B>!YQ2:N^d%2N^7ONX$wT(LPy#[1uio _9vȋ3:?O]k;3ANg.yn+snosĆ9S}&C&Dx=R80,kqzA˶EK=mQԻ Ff;:qcDrߑIL" jȋ6 ƐƉ@м{ HD6,@gn(= "-Y:Cڜ_0 3~| ,#81y SхL9yt38Ifɵea/q~pf@lv$oǾ1 aAXZF Em2`a'(F1Ka }P43HϊdqW{42 c]䜣 %*PeAHH F)_NF#" Fj8֪ ܉=>_je bĴ\b1C$u!XCj XݙaڅB‘j "!(<1;+ N;`Ya - -&ɥa+)I2zG7%/i_9fEn%اe NY/B0$BiIhnLɣ'$K ?(j=Ρ4[Q |Xv\Giҫ̨x^o(k,q zƾ!r!h -~[ Y,AQ H|)þ`4 $LA-cc9e);fiN )3:h 7&qRy+[4 MLğxj tp$`:АstD;.eg]Mw B~7w!ѐ-~>V懕'*/EzU!2.ߵm%i`U[L$Ĩhet)wYx?ϮDt.LYD]04!@  IU AmWv"" g+ /̧5%K@6MW uu"7 8}aq颷&"cADc} ao>.M Q!-''yO6r!?r,#"kDyL7; iD{' @S'-Bޒ) UZH" c-5[(d"6t"\~EOVUqGıv [6>!J&I k{n."; iOlw6!D2up=GA1{9@dx.ڞiD}Gt9.딛lbҏcz/,"ژ (MDҰAr}G(,葌oT M}*[ڤM־m@` dNɝK<3J̊Fs4gX}FWxYM>nm&gjx bvW ,*Ϯ_I!55o 2#b0VAf#5!v i\)g2`_SW =)48;5AYq2&nl4gՁZLMy$:[#ް8Vv~d‡^ DԚ*;G JTl I> 3=.uJ_6Wlȩx[Q2gw +-t@o1)As;ܱ 1j\R8^3*GF-Sn~[8 ]lK)\ F!mۉ6DY822yşg4)3IŚlz€=4k2>Yz[٦XI$l++kS\ 4B]$7 +%s:B rlr%04fd6ξnA,+qzp 5'p#f(`TdˆX8)-h"ƙo(3 [BР8 z.mN {*;Be,Ws=$k2&x ؍f DjR'`k6l^V:3 @gHL B7MM KUzZTzHo`6-̴`( = YkrzˏJ >6#+@%( bWYrd y|! {)@1s0fO>h> ^SX,s∆rW7A顔Gb{'@C@*U<ϾY1rݖ`hxrl )mFW`s55nf DA{% $?ͨ_h0$6 XƍDcA}p_w(kRm"/аa7!J (1Auqp;l=^n1X7|M&݉$¨Z`( k=T}ZKX 3+mZ`s_^A1NS2 vUvs%@ 6$ƃmn?9*㑼X"&Vlcbč(dg7 4#aRC_NEvn'H0JpT]Ul P AD+%М=Uͧ2)s?5YHI[8as 2*m2Fs4z{i B%_ܬVC"HD8I8 d#kםbS4xq FWfFAHċA )IJ"c `%&tc2b3`+]ِ;2y|z\3RNm.mi,sֺڴ9`5PMИp1C HH%C]_ϑqdt,;=h4!0v6D_O,SGLLe--IrxU"5b~v) 0hAkHWTܗpՄ6[ef\^z >Th+9H,|#6:H9 [Ž.E0Buf".H;>)l̚YR!F\f4slpaU~T#){(݂Z>Hb=Rܳk{yXv9-TCӷaQ*.iyz[Ycnz4"W\SA/U !DjR.A/D;,J@ /CQ~y^>D@Ҍ6%R6~#靥IKQv{GқŠ;!i2CTZz6ǐ~MºW,;aa2t9ui~^$͛6JX r$dꕑVʞԥZD։c;ڊB p!Wb :m3f8m> S.2B 1r0!γvA[ 򆈦_mf) oc<} ĈZjW /ӵ֦!c+7vh U۾֦%͞,n k+UtnCOX[lqV ڜ);d<t9 W^.eG~6BItvw24AD]T-WPto)>!|co?]+){m'i6Hq PPΫ5aH5N^ʾtk@1 Z7Z}@Wkk3NJF ypn!c_a4݀9:Mé4zh#6CZ(`3J :4fwS iB}3QG \JAID Ǣ+mK_\* n`,ky* ;Pn\$Jִ&y*uZA9 uMOϙ bk  pSuk3)X ;(43xr! QC MDk[g+uXHʄ~\`?8 mu:,҃. IrX!-=[`m νv(t<-FOu{Wb=pGˍ_g=h-p)PFO!?rL˕4T1DG,EJ'. #xdVt "T;"EnV|@f ':J>+vm_ r} GKDFl#NRKJaDC!y8q >RG%C>&0!P=T4#̂,*5|- XtU 56Xm5'S'0U6`meXk6XC:]S,UdQPΤj?\QkZm5&{ Y`>f+z҆eiM=c'O:qSp= $GV29(( K0-m-fͦ YmmueϾG&|f+@LO^l}> }}o909 aaWe Ca6 ٞE F:g ǃLDb9ﺺnS}RB&ǣ<S"H;&j\ƺg["nt7n^% @G Y+54)oX%_{j%ݴ=Sq| \ w=ɣ[D:C`mVYU;Y٬xSȗ2slyw"0@3 irDmc ok63eC ĀfQWb^0S"pLjaħCr4e#D#\Nܦ_śM-Zjelx/Wթ#gI*e G-et@3) 9j@&$B5 R4 ɡ|?I9 fL(Kyoj(7rhY<+? (il4uJI9+P⁄D؁eP`Ira8! Igi>v%`C {P5*K+JF'۱QMiτpY/+X)?Ѐ lns 67j,=d]蠛-C?3(eg/a%28y')7 Q(%g DOIY,.AAd\CМ@mɡ¸Rpm]smD jiҦ7a1l<3-Ґ<K!V&㏕M]j/lN4"`LF*X1A<it)<i;e3r3B).%/Z~c _/gjdJ7u:viLБg6mu^>ouuNRjΤݱ0<ِkNC.S}:PW0\,j8\>O?H@͇{|W`6rtnȈ4`>#mSkmZ},A6=x4GIq`VܪLwTxE'0[ dZ-AGݟ#'(H'#ʰm&hP96C10Hۢ\q&yN &`pԦ [%703&L6@'֡JZ  舔Y $/widSץJׄ#NE J'-&pӆA;3U<< w+hz [<Og[Q3[Ҿ~5(dA*1 {&C'Uo0[JL$y.pr8RZѐntBτ퇶viy@&BN_J˅M.~I:Yux\keGWy|0.P/d g1XBc{|'9Ru|#GX&#nƳu] #AL|ȿccvJj8#e@}Fu C7cX͙ڽLޯ2$tOJI-B68<%z TbDTV"fG17LY:B sy` SG~uF km ܵ5=tq="Ld+nayj#AVXj͏MiЭUUWW|aJ 9K(ioW8kķn )J5I9a{He#Mj>o\lpKԭ' -yGϊ T!Lvlo@]~=C`}s;Bzl5B0:C,ƣ4E;7ADtT1\A> bjLD>B~tz<@-m(RLT*][Ӏj2X0*jFgSNawFvӐK@=+ygCvwsD#xDc4Ym6m#l-P©% %Pc?BwV7F6q*՘@ÍZ+Rq8qcy#\Nƒwqcbs ;5gE;Hu>m~K[B]rA$8Û.P#+ ܗa5+hZ\4{,EC3 .;س+b"҄J0FKwk#A[5+&gQdQe&y~7Vקc~1-1a_8J[YrW8 endstream endobj 5 0 obj 23923 endobj 2 0 obj << /Type /Page /Parent 3 0 R /Resources 6 0 R /Contents 4 0 R >> endobj 6 0 obj << /ProcSet [ /PDF /Text ] /ColorSpace << /Cs1 7 0 R >> /Font << /TT1 8 0 R /TT2 9 0 R >> >> endobj 10 0 obj << /Length 11 0 R /N 3 /Alternate /DeviceRGB /Filter /FlateDecode >> stream xwTSϽ7" %z ;HQIP&vDF)VdTG"cE b PQDE݌k 5ޚYg}׺PtX4X\XffGD=HƳ.d,P&s"7C$ E6<~&S2)212 "įl+ɘ&Y4Pޚ%ᣌ\%g|eTI(L0_&l2E9r9hxgIbטifSb1+MxL 0oE%YmhYh~S=zU&ϞAYl/$ZUm@O ޜl^ ' lsk.+7oʿ9V;?#I3eE妧KD d9i,UQ h A1vjpԁzN6p\W p G@ K0ށiABZyCAP8C@&*CP=#t] 4}a ٰ;GDxJ>,_“@FXDBX$!k"EHqaYbVabJ0՘cVL6f3bձX'?v 6-V``[a;p~\2n5׌ &x*sb|! ߏƿ' Zk! $l$T4QOt"y\b)AI&NI$R$)TIj"]&=&!:dGrY@^O$ _%?P(&OJEBN9J@y@yCR nXZOD}J}/G3ɭk{%Oחw_.'_!JQ@SVF=IEbbbb5Q%O@%!BӥyҸM:e0G7ӓ e%e[(R0`3R46i^)*n*|"fLUo՝mO0j&jajj.ϧwϝ_4갺zj=U45nɚ4ǴhZ ZZ^0Tf%9->ݫ=cXgN].[7A\SwBOK/X/_Q>QG[ `Aaac#*Z;8cq>[&IIMST`ϴ kh&45ǢYYF֠9<|y+ =X_,,S-,Y)YXmĚk]c}džjcΦ浭-v};]N"&1=xtv(}'{'IߝY) Σ -rqr.d._xpUەZM׍vm=+KGǔ ^WWbj>:>>>v}/avO8 FV> 2 u/_$\BCv< 5 ]s.,4&yUx~xw-bEDCĻHGKwFGEGME{EEKX,YFZ ={$vrK .3\rϮ_Yq*©L_wד+]eD]cIIIOAu_䩔)3ѩiB%a+]3='/40CiU@ёL(sYfLH$%Y jgGeQn~5f5wugv5k֮\۹Nw]m mHFˍenQQ`hBBQ-[lllfjۗ"^bO%ܒY}WwvwXbY^Ю]WVa[q`id2JjGէ{׿m>PkAma꺿g_DHGGu;776ƱqoC{P38!9 ҝˁ^r۽Ug9];}}_~imp㭎}]/}.{^=}^?z8hc' O*?f`ϳgC/Oϩ+FFGGόzˌㅿ)ѫ~wgbk?Jި9mdwi獵ޫ?cǑOO?w| x&mf endstream endobj 11 0 obj 2612 endobj 7 0 obj [ /ICCBased 10 0 R ] endobj 3 0 obj << /Type /Pages /MediaBox [0 0 963 860] /Count 1 /Kids [ 2 0 R ] >> endobj 12 0 obj << /Type /Catalog /Pages 3 0 R >> endobj 8 0 obj << /Type /Font /Subtype /TrueType /BaseFont /VOLMSA+Times-Roman /FontDescriptor 13 0 R /Encoding /MacRomanEncoding /FirstChar 32 /LastChar 68 /Widths [ 250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 722 667 667 722 ] >> endobj 13 0 obj << /Type /FontDescriptor /FontName /VOLMSA+Times-Roman /Flags 32 /FontBBox [-203 -428 1700 1272] /ItalicAngle 0 /Ascent 750 /Descent -250 /CapHeight 662 /StemV 102 /XHeight 454 /StemH 38 /AvgWidth 591 /MaxWidth 1721 /FontFile2 14 0 R >> endobj 14 0 obj << /Length 15 0 R /Length1 6256 /Filter /FlateDecode >> stream xX tSU}r(MhҦ9iGmJK%%)B"R,h)# *pa`DE5^N_#.]Πϙѥvtf@gT|,,׽wݳ}r]c)h-";WS1@p=)>=o S|f g:xhu7 RS&qÐPut1¥KVXpP8y Kъ/Vx˵VZ^!ˀY)=hLBHuzSڻUa'wR=KH$KH$:G\ yGSSNѸr+׸y 8(?dv4CxzExq2+7M@3[dh~G4!wD ZH}֢li1bbo1_b~ @19yDbs`yMyU_L`"ڟDM4>ѼqƉͮ\3u2vgu2E+BC~4(x}Blo=(4ěDPB]5%4lEDם#82M?x[ & Y a:nK}/ 6,2tZ6KzȜ?B&KBbK1R`yY\Geq#?~.+npfxp"pOxq*yX5PVkf[Sf*QA@3 sًYߖH2`f/SMT44,.OS򴉂A2& A_RSVRi)4M=kuYJ}OJ}:<ΛGHڮl[PžTywvKS +7Kao6;zh~+?KhCoڱ,-_[/Z{|P'[ڤޤ"M&͗Ȣ+YysW J`|3Qupp{T~ht'rQ+Kԇnd-NaGex&Upޭ#+zp,+P a 6EM>Mj8q< Qe;ܑ<p1yo#F83FpӜa)f#ãf%`$TAp5tC\?%p^C~r3a@ߠ?tdwr1̠Ӹݴ+N&$[Ш]p/B] rp:$*iNV&/}&C3̦=Vr;< /Pyc5R\x5ru-Ke ſ"#T&X[.p6NMW%oJJ>|v Le` lc4N{ h1fc%4o%\/wH:~sĹ[/$AgtpPM>a*L, 8}p; o0 ̧u`#^7//cV&rag.+*^n_lؒL,HJIiXo:RN:{w"+qPMTKDr9U\V,L)^W^F)J #G5#£)?ip1m"jPq?,ZL栣CꩆjlvLFwCqGN(04^7XIom4}jz<yhu05AVDů_q/yU_s5efdZSr^]CBHlKko767X6dln}==={}ba0}:=+ A5;uNAՙavZ\ Cf&Ѩ2ДVI#\.ނYizCDGcn]&#'fX8`bi`gq<-c&(\t'JtNҎ1;~Fd ~""faUg6-37p+knݟ1c9U#n,7H:c%,lrng,c|_zʌV\Α~)dM7U"eswy|Gweden#[$(gfGY,OXUn*Y Ψe u>4@P,E&~>qOz($ޝx8j/㓼3=33XnNwȕ1nuW3].X;ceThԷ\l)f9_%uk( 8S~'tz;mp4eS08.C-J-f-Լ:D6QzQf?/J|HYn\Ί^e]V.Acl^tuzJnR}bO慄+ўdtzisA4B̘2io뢞iKz:o%%9 endstream endobj 15 0 obj 4312 endobj 9 0 obj << /Type /Font /Subtype /TrueType /BaseFont /XWJKKM+Helvetica /FontDescriptor 16 0 R /Encoding /MacRomanEncoding /FirstChar 32 /LastChar 222 /Widths [ 278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 278 0 0 0 0 0 0 667 667 0 0 667 0 0 0 0 0 0 0 0 0 0 0 0 0 667 611 0 0 0 0 0 0 0 0 0 0 556 0 556 556 500 556 556 278 556 556 222 0 500 222 833 556 556 556 556 333 500 278 556 500 722 500 500 500 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 500 ] >> endobj 16 0 obj << /Type /FontDescriptor /FontName /XWJKKM+Helvetica /Flags 32 /FontBBox [-951 -481 1445 1122] /ItalicAngle 0 /Ascent 770 /Descent -230 /CapHeight 717 /StemV 98 /XHeight 523 /StemH 85 /AvgWidth 441 /MaxWidth 1500 /FontFile2 17 0 R >> endobj 17 0 obj << /Length 18 0 R /Length1 13656 /Filter /FlateDecode >> stream x{{|TEpw<2df2CBC 1< $@@P@nTX CpUԅB/뢈Ut]W{ͺ~3!B|gR]}tWUWW9YlEJ@]A3ZCҕ !rf%q<)1c3si1-8"$_9xپlokoG /l8G@ھx=q\Ewl׽x{>ygx吧.nÕ}ɲPF  5 ?1;k%|vCRK=vͧ**dӜG)1(HA)0((n1.= M`#cP`'>V ĝȂc0˜S 9~ ?")UGt-`}ypds.7Yn>Nj0 / &:؟p}C~qqȱ-9w91ܳ5í;ss;Pڧ‘.G#1r z;1 핾QA=}P?:Z Uj?W|PV]EB\UЉZQ-D(EQ9S*:*"A%{ *YHԅcb CjZ1^*a|hp+5 -C)"X$h< Q5!ո?=C, HCf = J|^$H':h]hP:"&F,g^/R J6k:yz?_tri +=st2ff.^:v*v.2";-Ck`u/ 30 {p .dzׅx/>A|ĿşU%ѓYNCE:<n/>F7F_>} *VD.L9CQ v Vq~%t^}mh} T@X-8¯ߊ |~/Hs#hJ.bL:3"srlgDZ5h3 }lǾsc:nm63s7~  D.a3p  Ck A(CPJNc 4tǑwnEnA0<\M7#}.u)  #n4HRq)X_p;f60;],, <(A"G7curtBcdr簂`dA Ơ \2^&g8zڄ:'r2ak,61KӮ02ciYimV).mq1igV'ȞسL T0g}׫KKԄ'c7bܘہuSOF&3Jfwcq8Z-qt'ЅvE?8rF B0afYj5.:YG'&"'nKLI3a^$+1Y_tuя"ۘzwC٢ő ~j#rK}Mپ@a-w d|@5F]0UHfY !J,WJT/ %2=Ȝ cQqI/eXd6H#TZ7ȤK emca"qp^x$ͱwoP6YD-Ty[T+Sew&CU)\5*%5Eΰ6ӏu(Î r\%jRSi99X#z,yy͹yO4+VKhYjӲ4$/fzxd̒2.xiOrUo ` g$)أYP$kmh ju եRQJ$ ly Fz7)^g48hu;}"s[2oħrf;85GwD5wr-_;ia7;&-3/5+ٚUoSc7s!<]QunL_' ;/38QWlHr31ߨ*&55q4ͦ)xNmQa~S~ϻ5FY1߷};W>b&!|s[ebh Ȋe[B]X#ke=}VEPd )~Yy ),﷛Z<1KlL!+Yr*_fιa\(/rAˉ)e`{;͒Фz^w׋,h*JT)</Y'Z8Ps 5`;RAB:-R)gtHZL_tI/U|x#e w~.z 'qųBg۽/ޚ}-ZkWȴL {oOYK2%>Rb@SkD`}/iBH!Jy_n1aF|p)C5*+NbL7t?jA5~JKp'"3E /F^rHM(%`P?0h>cA8yF@nCl؁F/1bӯ^N& -@s %b3 fsNa=w9\bG2%P2\/^b-PMD9e /x9oI)sB VjSV)XeZkj/XZ5qgb(QRp qwƯ|y;}>+Jl;mQA pVh3@86SX{qȋKQPFѨ2&Dj4|[nFn'6$Ogj!'A8c<9̾0NQ. \ r|PpB$[p%J?(Q֠\ a}K2RKn{. ;n/ukԪiS%RD~˾Vrjqބ'ޠ'3zcfsx:ާ NIt&5XR7)bAJbY&`޴=Gʠܙ-b߰G@ǫ0ă3sGfZ~ONҹ "od%YIJ)p0ClO}_e?S^%vkfl_*kZ< ؐ$I~*dpri F(q P^Ր0$qDjj%?zJ|-bd}.gɟ |q-Da8qߎY^;tH9FxDX,]R`qNFB")*3YR`)fwߵt%% "6q/EVXgU^5Iˢ.n<_>Ώ'47yyJѬ?:=|w䜒_5ȩ9&4{X;f$D~Ce4z8X 4UL=x?cDQ؝B- J,)*J\^\j0YK>dc4IV Z~CKKH>*~> ؏=/O<s<^3ke禦'636jwW߆u+Sn z}7Dz*QMT2LvEK-2k¸H Lu.JBh33uYiS!9H2l' =kw@-Tj"lWa2|1i^fU9|1ȗeSAUb5r!P/*DIzT'v#.LkΪ331Ņ\)'waG&h $YcsI3;:#mܞ$ɜ`DWgѾxN ؼiu+_,_G_q\?#g+SOIoϷh7.XnNggT>Ѕ"ȸ'?%?a\b#ë KUDl ;%aa)PG.K$\~{ s!>7!Y[3cVnFmʑI L擗 ^Y3'uiJ]0*#>A΁6 &YrRa`?[׭ZmY)j&(Y+\iIC#{fMH޳PNlxBY%L|Nڙzv"#xF '֤ݝF#pH|-Ɇf`r>L'q<`gXr2\{xԎVb(uZ!&L z_0,CCߏ[\).ÇFu nY$6'KEg+ i&P[텒;kƱe~\%(3:eB1OX((:NCީX't+/ǬDp4Cxl .aŌ/ W#2Y9U GiN4CEӡTH5VTpv.yo &&r#/D8)ҲQ²[1b׫W5qԌ{%~P }5tRj$JirAK>x3k'PTwGbY?CPEFS!bqqNnnɿDwϣDq'];C>Z#mܫ;LM Fj JfY p44MЏ3׳YCmR8hET$E5 V`9ԫ|v]{tXg6^5A^kF1<&xICIO3rrnRF5|!n (E@yq>Zx^rv:/[͍QE͞~^|6wGS:)FN=Fl. h:jy x>ntW嘇` &;b,Jf<2+}CFd.C(zZ%*;Eh 0H?3&t_olam}5`CGcX!f,~fF3ph.5orMXz50r6t$\i z)s7?ox ߿s~6xsW/Jg$onJi ޖ"x7Z*QEo |NۭCJ_O7(P#΄8PGn5L?aBmmQGsZR3$<8pc?a~4,x)   hX0S*c2 /Wç çg[9p7gްaapgw Á7//7_> _1 3 )m: endstream endobj 18 0 obj 8872 endobj 19 0 obj (macOS Version 10.14.6 \(Build 18G6020\) Quartz PDFContext) endobj 20 0 obj (D:20201127030551Z00'00') endobj 1 0 obj << /Producer 19 0 R /CreationDate 20 0 R /ModDate 20 0 R >> endobj xref 0 21 0000000000 65535 f 0000042038 00000 n 0000024040 00000 n 0000027000 00000 n 0000000022 00000 n 0000024019 00000 n 0000024120 00000 n 0000026964 00000 n 0000027133 00000 n 0000032065 00000 n 0000024228 00000 n 0000026943 00000 n 0000027083 00000 n 0000027389 00000 n 0000027642 00000 n 0000032044 00000 n 0000032686 00000 n 0000032936 00000 n 0000041899 00000 n 0000041920 00000 n 0000041996 00000 n trailer << /Size 21 /Root 12 0 R /Info 1 0 R /ID [ ] >> startxref 42113 %%EOF augur-24.2.2/paper/paper.bib000066400000000000000000000517001456376326500156440ustar00rootroot00000000000000 @article{griffiths_pha4ge_2020, title = {The {PHA4GE} {SARS}-{CoV}-2 {Contextual} {Data} {Specification} for {Open} {Genomic} {Epidemiology}}, url = {https://www.preprints.org/manuscript/202008.0220/v1}, doi = {10.20944/preprints202008.0220.v1}, abstract = {The Public Health Alliance for Genomic Epidemiology (PHA4GE) (https://pha4ge.org) is a global coalition that is actively working to establish consensus standards, document and share best practices, improve the availability of critical bioinformatic tools and resources, and advocate for greater openness, interoperability, accessibility and reproducibility in public health microbial bioinformatics. In the face of the current pandemic, PHA4GE has identified a clear and present need for a fit-for-purpose, open source SARS-CoV-2 contextual data standard. As such, we have developed an extension to the INSDC pathogen package, providing a SARS-CoV-2 contextual data specification based on harmonisable, publicly available, community standards. The specification is implementable via a collection template, as well as an array of protocols and tools to support the harmonisation and submission of sequence data and contextual information to public repositories. Well-structured, rich contextual data adds value, promotes reuse, and enables aggregation and integration of disparate data sets. Adoption of the proposed standard and practices will better enable interoperability between datasets and systems, improve the consistency and utility of generated data, and ultimately facilitate novel insights and discoveries in SARS-CoV-2 and COVID-19.}, language = {en}, urldate = {2020-12-07}, author = {Griffiths, Emma J. and Timme, Ruth E. and Page, Andrew J. and Alikhan, Nabil-Fareed and Fornika, Dan and Maguire, Finlay and Mendes, Catarina Inês and Tausch, Simon H. and Black, Allison and Connor, Thomas R. and Tyson, Gregory H. and Aanensen, David M. and Alcock, Brian and Campos, Josefina and Christoffels, Alan and Silva, Anders Gonçalves da and Hodcroft, Emma and Hsiao, William W. L. and Katz, Lee S. and Nicholls, Samuel M. and Oluniyi, Paul E. and Olawoye, Idowu B. and Raphenya, Amogelang R. and Vasconcelos, Ana Tereza R. and Witney, Adam A. and MacCannell, Duncan R.}, month = aug, year = {2020}, note = {Publisher: Preprints}, file = {Full Text PDF:C\:\\Users\\Emma\\Zotero\\storage\\DKB3PGD2\\Griffiths et al. - 2020 - The PHA4GE SARS-CoV-2 Contextual Data Specificatio.pdf:application/pdf} } @misc{NextstrainNcov2020, title = {nextstrain/ncov}, copyright = {MIT License}, url = {https://github.com/nextstrain/ncov}, abstract = {Nextstrain build for novel coronavirus SARS-CoV-2}, urldate = {2020-11-09}, author = {{The Nextstrain Team}}, month = nov, year = {2020}, note = {original-date: 2020-01-19T17:23:17Z}, keywords = {ncov, nextstrain, sars-cov-2} } @article{Alm2020, title = {Geographical and temporal distribution of {SARS}-{CoV}-2 clades in the {WHO} {European} {Region}, {January} to {June} 2020}, volume = {25}, issn = {1560-7917}, url = {https://www.eurosurveillance.org/content/10.2807/1560-7917.ES.2020.25.32.2001410}, doi = {10.2807/1560-7917.ES.2020.25.32.2001410}, abstract = {We show the distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) genetic clades over time and between countries and outline potential genomic surveillance objectives. We applied three genomic nomenclature systems to all sequence data from the World Health Organization European Region available until 10 July 2020. We highlight the importance of real-time sequencing and data dissemination in a pandemic situation, compare the nomenclatures and lay a foundation for future European genomic surveillance of SARS-CoV-2.}, language = {en}, number = {32}, urldate = {2020-08-26}, journal = {Eurosurveillance}, author = {Alm, Erik and Broberg, Eeva K. and Connor, Thomas and Hodcroft, Emma B. and Komissarov, Andrey B. and Maurer-Stroh, Sebastian and Melidou, Angeliki and Neher, Richard A. and O’Toole, Áine and Pereyaslov, Dmitriy and The WHO European Region Sequencing Laboratories {and} GISAID EpiCoV Group,}, month = aug, year = {2020}, note = {Publisher: European Centre for Disease Prevention and Control}, pages = {2001410} } @article{Gardy2015, title = {Real-time digital pathogen surveillance — the time is now}, volume = {16}, issn = {1474-760X}, url = {https://doi.org/10.1186/s13059-015-0726-x}, doi = {10.1186/s13059-015-0726-x}, abstract = {It is time to shake up public health surveillance. New technologies for sequencing, aided by friction-free approaches to data sharing, could have an impact on public health efforts.}, urldate = {2018-01-08}, journal = {Genome Biology}, author = {Gardy, Jennifer and Loman, Nicholas J. and Rambaut, Andrew}, month = jul, year = {2015}, keywords = {Ebola, Real-time whole-genome sequencing, Surveillance, Salmonella}, pages = {155}, annote = {Pages 155 in PDF}, } @article{Price2010, author = {Price, Morgan N. AND Dehal, Paramvir S. AND Arkin, Adam P.}, journal = {PLOS ONE}, publisher = {Public Library of Science}, title = {FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments}, year = {2010}, month = {03}, volume = {5}, url = {https://doi.org/10.1371/journal.pone.0009490}, pages = {1-10}, abstract = {Background We recently described FastTree, a tool for inferring phylogenies for alignments with up to hundreds of thousands of sequences. Here, we describe improvements to FastTree that improve its accuracy without sacrificing scalability. Methodology/Principal Findings Where FastTree 1 used nearest-neighbor interchanges (NNIs) and the minimum-evolution criterion to improve the tree, FastTree 2 adds minimum-evolution subtree-pruning-regrafting (SPRs) and maximum-likelihood NNIs. FastTree 2 uses heuristics to restrict the search for better trees and estimates a rate of evolution for each site (the “CAT” approximation). Nevertheless, for both simulated and genuine alignments, FastTree 2 is slightly more accurate than a standard implementation of maximum-likelihood NNIs (PhyML 3 with default settings). Although FastTree 2 is not quite as accurate as methods that use maximum-likelihood SPRs, most of the splits that disagree are poorly supported, and for large alignments, FastTree 2 is 100–1,000 times faster. FastTree 2 inferred a topology and likelihood-based local support values for 237,882 distinct 16S ribosomal RNAs on a desktop computer in 22 hours and 5.8 gigabytes of memory. Conclusions/Significance FastTree 2 allows the inference of maximum-likelihood phylogenies for huge alignments. FastTree 2 is freely available at http://www.microbesonline.org/fasttree.}, number = {3}, doi = {10.1371/journal.pone.0009490} } @article{Stamatakis2014, author = {Stamatakis, Alexandros}, title = "{RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies}", journal = {Bioinformatics}, volume = {30}, number = {9}, pages = {1312-1313}, year = {2014}, month = {01}, abstract = "{Motivation: Phylogenies are increasingly used in all fields of medical and biological research. Moreover, because of the next-generation sequencing revolution, datasets used for conducting phylogenetic analyses grow at an unprecedented pace. RAxML (Randomized Axelerated Maximum Likelihood) is a popular program for phylogenetic analyses of large datasets under maximum likelihood. Since the last RAxML paper in 2006, it has been continuously maintained and extended to accommodate the increasingly growing input datasets and to serve the needs of the user community.Results: I present some of the most notable new features and extensions of RAxML, such as a substantial extension of substitution models and supported data types, the introduction of SSE3, AVX and AVX2 vector intrinsics, techniques for reducing the memory requirements of the code and a plethora of operations for conducting post-analyses on sets of trees. In addition, an up-to-date 50-page user manual covering all new RAxML options is available.Availability and implementation: The code is available under GNU GPL at https://github.com/stamatak/standard-RAxML.Contact:alexandros.stamatakis@h-its.orgSupplementary information:Supplementary data are available at Bioinformatics online.}", issn = {1367-4803}, doi = {10.1093/bioinformatics/btu033}, url = {https://doi.org/10.1093/bioinformatics/btu033}, eprint = {https://academic.oup.com/bioinformatics/article-pdf/30/9/1312/17345185/btu033.pdf}, } @Article{Black2020, author={Black, Allison and MacCannell, Duncan R. and Sibley, Thomas R. and Bedford, Trevor}, title={Ten recommendations for supporting open pathogen genomic analysis in public health}, journal={Nature Medicine}, year={2020}, month={Jun}, day={01}, volume={26}, number={6}, pages={832-841}, abstract={Increasingly, public-health agencies are using pathogen genomic sequence data to support surveillance and epidemiological investigations. As access to whole-genome sequencing has grown, greater amounts of molecular data have helped improve the ability to detect and track outbreaks of diseases such as COVID-19, investigate transmission chains and explore large-scale population dynamics, such as the spread of antibiotic resistance. However, the wide adoption of whole-genome sequencing also poses new challenges for public-health agencies that must adapt to support a new set of expertise, which means that the capacity to perform genomic data assembly and analysis has not expanded as widely as the adoption of sequencing itself. In this Perspective, we make recommendations for developing an accessible, unified informatic ecosystem to support pathogen genomic analysis in public-health agencies across income settings. We hope that the creation of this ecosystem will allow agencies to effectively and efficiently share data, workflows and analyses and thereby increase the reproducibility, accessibility and auditability of pathogen genomic analysis while also supporting agency autonomy.}, issn={1546-170X}, doi={10.1038/s41591-020-0935-z}, url={https://doi.org/10.1038/s41591-020-0935-z} } @article {Bedford2020, author = {Bedford, T. and Greninger, A. L. and Roychoudhury, P. and Starita, L. M. and Famulare, M. and Huang, M. and Nalla, A. and Pepper, G. and Reinhardt, A. and Xie, H. and Shrestha, L. and Nguyen, T. N. and Adler, A. and Brandstetter, E. and Cho, S. and Giroux, D. and Han, P. D. and Fay, K. and Frazar, C. D. and Ilcisin, M. and Lacombe, K. and Lee, J. and Kiavand, A. and Richardson, M. and Sibley, T. R. and Truong, M. and Wolf, C. R. and Nickerson, D. A. and Rieder, M. J. and Englund, J. A. and The Seattle Flu Study Investigators and Hadfield, J. and Hodcroft, E. B. and Huddleston, J. and Moncla, L. H. and M{\"u}ller, N. F. and Neher, R. A. and Deng, X. and Gu, W. and Federman, S. and Chiu, C. and Duchin, J. S. and Gautom, R. and Melly, G. and Hiatt, B. and Dykema, P. and Lindquist, S. and Queen, K. and Tao, Y. and Uehara, A. and Tong, S. and MacCannell, D. and Armstrong, G. L. and Baird, G. S. and Chu, H. Y. and Shendure, J. and Jerome, K. R.}, title = {Cryptic transmission of {SARS-CoV-2} in {W}ashington state}, elocation-id = {eabc0523}, year = {2020}, month = sep, doi = {10.1126/science.abc0523}, publisher = {American Association for the Advancement of Science}, abstract = {Following its emergence in Wuhan, China, in late November or early December 2019, the SARS-CoV-2 virus has rapidly spread globally. Genome sequencing of SARS-CoV-2 allows reconstruction of its transmission history, although this is contingent on sampling. We have analyzed 453 SARS-CoV-2 genomes collected between 20 February and 15 March 2020 from infected patients in Washington State, USA. We find that most SARS-CoV-2 infections sampled during this time derive from a single introduction in late January or early February 2020 which subsequently spread locally before active community surveillance was implemented.}, issn = {0036-8075}, URL = {https://science.sciencemag.org/content/early/2020/09/09/science.abc0523}, eprint = {https://science.sciencemag.org/content/early/2020/09/09/science.abc0523.full.pdf}, journal = {Science} } @article{Neher:2015jr, Author = {Neher, Richard A and Bedford, Trevor}, Journal = {Bioinformatics}, Month = nov, Number = {21}, Pages = {3546--3548}, Title = {{nextflu: real-time tracking of seasonal influenza virus evolution in humans.}}, Volume = {31}, Year = {2015}, doi = {10.1093/bioinformatics/btv381} } @article{Hadfield2018, author = {Hadfield, J. and Megill, C. and Bell, S. M. and Huddleston, J. and Potter, B. and Callender, C. and Sagulenko, P. and Bedford, T. and Neher, R. A.}, title = {Nextstrain: real-time tracking of pathogen evolution}, journal = {Bioinformatics}, volume = {}, number = {}, pages = {bty407}, year = {2018}, month = {May}, doi = {10.1093/bioinformatics/bty407}, URL = {http://dx.doi.org/10.1093/bioinformatics/bty407}, eprint = {/oup/backfile/content_public/journal/bioinformatics/pap/10.1093_bioinformatics_bty407/2/bty407.pdf} } @article{Li2009, author = {Li, Heng and Handsaker, Bob and Wysoker, Alec and Fennell, Tim and Ruan, Jue and Homer, Nils and Marth, Gabor and Abecasis, Goncalo and Durbin, Richard and 1000 Genome Project Data Processing Subgroup}, title = "{The Sequence Alignment/Map format and SAMtools}", journal = {Bioinformatics}, volume = {25}, number = {16}, pages = {2078-2079}, year = {2009}, month = {06}, abstract = "{Summary: The Sequence Alignment/Map (SAM) format is a generic alignment format for storing read alignments against reference sequences, supporting short and long reads (up to 128 Mbp) produced by different sequencing platforms. It is flexible in style, compact in size, efficient in random access and is the format in which alignments from the 1000 Genomes Project are released. SAMtools implements various utilities for post-processing alignments in the SAM format, such as indexing, variant caller and alignment viewer, and thus provides universal tools for processing read alignments.Availability:http://samtools.sourceforge.netContact:rd@sanger.ac.uk}", issn = {1367-4803}, doi = {10.1093/bioinformatics/btp352}, url = {https://doi.org/10.1093/bioinformatics/btp352}, eprint = {https://academic.oup.com/bioinformatics/article-pdf/25/16/2078/531810/btp352.pdf}, } @article{Li2011, author = {Li, Heng}, title = "{A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data}", journal = {Bioinformatics}, volume = {27}, number = {21}, pages = {2987-2993}, year = {2011}, month = {09}, abstract = "{Motivation: Most existing methods for DNA sequence analysis rely on accurate sequences or genotypes. However, in applications of the next-generation sequencing (NGS), accurate genotypes may not be easily obtained (e.g. multi-sample low-coverage sequencing or somatic mutation discovery). These applications press for the development of new methods for analyzing sequence data with uncertainty.Results: We present a statistical framework for calling SNPs, discovering somatic mutations, inferring population genetical parameters and performing association tests directly based on sequencing data without explicit genotyping or linkage-based imputation. On real data, we demonstrate that our method achieves comparable accuracy to alternative methods for estimating site allele count, for inferring allele frequency spectrum and for association mapping. We also highlight the necessity of using symmetric datasets for finding somatic mutations and confirm that for discovering rare events, mismapping is frequently the leading source of errors.Availability:http://samtools.sourceforge.netContact:hengli@broadinstitute.org}", issn = {1367-4803}, doi = {10.1093/bioinformatics/btr509}, url = {https://doi.org/10.1093/bioinformatics/btr509}, eprint = {https://academic.oup.com/bioinformatics/article-pdf/27/21/2987/577342/btr509.pdf}, } @article{Katoh2002, author = {Katoh, Kazutaka and Misawa, Kazuharu and Kuma, Kei‐ichi and Miyata, Takashi}, title = "{MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform}", journal = {Nucleic Acids Research}, volume = {30}, number = {14}, pages = {3059-3066}, year = {2002}, month = {07}, abstract = "{A multiple sequence alignment program, MAFFT, has been developed. The CPU time is drastically reduced as compared with existing methods. MAFFT includes two novel techniques. (i) Homo logous regions are rapidly identified by the fast Fourier transform (FFT), in which an amino acid sequence is converted to a sequence composed of volume and polarity values of each amino acid residue. (ii) We propose a simplified scoring system that performs well for reducing CPU time and increasing the accuracy of alignments even for sequences having large insertions or extensions as well as distantly related sequences of similar length. Two different heuristics, the progressive method (FFT‐NS‐2) and the iterative refinement method (FFT‐NS‐i), are implemented in MAFFT. The performances of FFT‐NS‐2 and FFT‐NS‐i were compared with other methods by computer simulations and benchmark tests; the CPU time of FFT‐NS‐2 is drastically reduced as compared with CLUSTALW with comparable accuracy. FFT‐NS‐i is over 100 times faster than T‐COFFEE, when the number of input sequences exceeds 60, without sacrificing the accuracy.}", issn = {0305-1048}, doi = {10.1093/nar/gkf436}, url = {https://doi.org/10.1093/nar/gkf436}, eprint = {http://oup.prod.sis.lan/nar/article-pdf/30/14/3059/9488148/gkf436.pdf}, } @article{Nguyen2014, author = {Nguyen, Lam-Tung and Schmidt, Heiko A. and von Haeseler, Arndt and Minh, Bui Quang}, title = "{IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies}", journal = {Molecular Biology and Evolution}, volume = {32}, number = {1}, pages = {268-274}, year = {2014}, month = {11}, abstract = "{Large phylogenomics data sets require fast tree inference methods, especially for maximum-likelihood (ML) phylogenies. Fast programs exist, but due to inherent heuristics to find optimal trees, it is not clear whether the best tree is found. Thus, there is need for additional approaches that employ different search strategies to find ML trees and that are at the same time as fast as currently available ML programs. We show that a combination of hill-climbing approaches and a stochastic perturbation method can be time-efficiently implemented. If we allow the same CPU time as RAxML and PhyML, then our software IQ-TREE found higher likelihoods between 62.2\\% and 87.1\\% of the studied alignments, thus efficiently exploring the tree-space. If we use the IQ-TREE stopping rule, RAxML and PhyML are faster in 75.7\\% and 47.1\\% of the DNA alignments and 42.2\\% and 100\\% of the protein alignments, respectively. However, the range of obtaining higher likelihoods with IQ-TREE improves to 73.3–97.1\\%. IQ-TREE is freely available at http://www.cibiv.at/software/iqtree.}", issn = {0737-4038}, doi = {10.1093/molbev/msu300}, url = {https://doi.org/10.1093/molbev/msu300}, eprint = {http://oup.prod.sis.lan/mbe/article-pdf/32/1/268/13171186/msu300.pdf}, } @article{Snakemake, author = {K{\"o}ster, Johannes and Rahmann, Sven}, title = {{Snakemake—a scalable bioinformatics workflow engine}}, journal = {Bioinformatics}, year = {2012}, volume = {28}, number = {19}, pages = {2520--2522}, month = aug, doi = {10.1093/bioinformatics/bts480} } @article{Sagulenko2018, author = {Sagulenko, Pavel and Puller, Vadim and Neher, Richard A}, title = "{TreeTime: Maximum-likelihood phylodynamic analysis}", journal = {Virus Evolution}, volume = {4}, number = {1}, year = {2018}, month = {01}, abstract = "{Mutations that accumulate in the genome of cells or viruses can be used to infer their evolutionary history. In the case of rapidly evolving organisms, genomes can reveal their detailed spatiotemporal spread. Such phylodynamic analyses are particularly useful to understand the epidemiology of rapidly evolving viral pathogens. As the number of genome sequences available for different pathogens has increased dramatically over the last years, phylodynamic analysis with traditional methods becomes challenging as these methods scale poorly with growing datasets. Here, we present TreeTime, a Python-based framework for phylodynamic analysis using an approximate Maximum Likelihood approach. TreeTime can estimate ancestral states, infer evolution models, reroot trees to maximize temporal signals, estimate molecular clock phylogenies and population size histories. The runtime of TreeTime scales linearly with dataset size.}", issn = {2057-1577}, doi = {10.1093/ve/vex042}, url = {https://doi.org/10.1093/ve/vex042}, eprint = {http://oup.prod.sis.lan/ve/article-pdf/4/1/vex042/23361340/vex042.pdf}, } augur-24.2.2/paper/paper.md000066400000000000000000000227321456376326500155130ustar00rootroot00000000000000--- title: "Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens" papersize: a4 tags: - Python - bioinformatics - molecular biology - human pathogens - evolutionary biology authors: - name: John Huddleston affiliation: "1, 2" orcid: 0000-0002-4250-2063 - name: James Hadfield affiliation: 2 orcid: 0000-0002-4118-6468 - name: Thomas R. Sibley affiliation: 2 orcid: 0000-0001-5269-2297 - name: Jover Lee affiliation: 2 orcid: 0000-0002-2391-0512 - name: Kairsten Fay affiliation: 2 orcid: 0000-0002-6529-9205 - name: Misja Ilcisin affiliation: 2 orcid: 0000-0002-1468-7697 - name: Elias Harkins affiliation: 2 orcid: 0000-0001-6525-9134 - name: Trevor Bedford affiliation: "1, 2" orcid: 0000-0002-4039-5794 - name: Richard A. Neher affiliation: "3, 4" orcid: 0000-0003-2525-1407 - name: Emma B. Hodcroft affiliation: "3, 4, 5" orcid: 0000-0002-0078-2212 affiliations: - name: Molecular and Cellular Biology Program, University of Washington, Seattle, WA, USA index: 1 - name: Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA index: 2 - name: Biozentrum, University of Basel, Basel, Switzerland index: 3 - name: Swiss Institute of Bioinformatics, Basel, Switzerland index: 4 - name: Institute of Social and Preventive Medicine, University of Bern, Bern, Switzerland index: 5 date: 5 January 2021 bibliography: paper.bib --- # Summary and statement of need The analysis of human pathogens requires a diverse collection of bioinformatics tools. These tools include standard genomic and phylogenetic software and custom software developed to handle the relatively numerous and short genomes of viruses and bacteria. Researchers increasingly depend on the outputs of these tools to infer transmission dynamics of human diseases and make actionable recommendations to public health officials [@Black2020; @Gardy2015]. In order to enable real-time analyses of pathogen evolution, bioinformatics tools must scale rapidly with the number of samples and be flexible enough to adapt to a variety of questions and organisms. To meet these needs, we developed Augur, a bioinformatics toolkit designed for phylogenetic analyses of human pathogens. Augur originally existed as an internal component of the nextflu [@Neher:2015jr] and Nextstrain [@Hadfield2018] applications. As a component of nextflu, Augur consisted of a single monolithic Python script that performed most operations in memory. This script prepared a subset of seasonal influenza sequences and metadata and then processed those data to produce an annotated phylogeny for visualization in the nextflu web application. When Nextstrain replaced nextflu and expanded to support multiple viral and bacterial pathogens, each pathogen received its own copy of the original script. The resulting redundancy of these large scripts complicated efforts to debug analyses, add new features for all pathogens, and add support for new pathogens. Critically, this software architecture led to long-lived, divergent branches of untested code in version control that Nextstrain team members could not confidently merge without potentially breaking existing analyses. # Implementation To address these issues, we refactored the original Augur scripts into a toolkit of individual subcommands wrapped by a single command line executable, `augur`. With this approach, we followed the pattern established by samtools [@Li2009] and bcftools [@Li2011] where subcommands perform single, tightly-scoped tasks (e.g., "view", "sort", "merge", etc.) that can be chained together in bioinformatics pipelines. We migrated or rewrote the existing functionality of the original Augur scripts into appropriate corresponding Augur subcommands. To enable interoperability with existing bioinformatics tools, we designed subcommands to accept inputs and produce outputs in standard bioinformatics file formats wherever possible. For example, we represented all raw sequence data in FASTA format, alignments in either FASTA or VCF format, and phylogenies in Newick format. To handle the common case where a standard file format could not represent some or all of the outputs produced by an Augur command, we implemented a lightweight JSON schema to store the remaining data. The "node data" JSON format represents one such Augur-specific file format that supports arbitrary annotations of phylogenies indexed by the name assigned to internal nodes or tips. To provide a standard interface for our own analyses, we also designed several Augur subcommands to wrap existing bioinformatics tools including `augur align` (mafft [@Katoh2002]) and `augur tree` (FastTree [@Price2010], RAxML [@Stamatakis2014], and IQ-TREE [@Nguyen2014]). Many commands including `augur refine`, `traits` and `ancestral` make extensive use of TreeTime [@Sagulenko2018] to provide time-scaled phylogenetic trees or further annotate the phylogeny. By implementing the core components of Augur as a command line tool, we were able to rewrite our existing pathogen analyses as straightforward bioinformatics workflows using existing workflow management software like Snakemake [@Snakemake]. Most pathogen workflows begin with user-curated sequences in a FASTA file (e.g., `sequences.fasta`) and metadata describing each sequence in a tab-delimited text file (e.g., `metadata.tsv`). Users can apply a series of Augur commands and other standard bioinformatics tools to these files to create annotated phylogenies that can be viewed in Auspice, the web application that serves [Nextstrain](https://nextstrain.org) (\autoref{fig:example-workflows}). This approach allows users to leverage the distributed computing abilities of workflow managers to run multiple steps of the workflow in parallel and also run individual commands that support multiprocessing in parallel. Further, the Augur modules can be easily recombined both with each other and with user-generated scripts to flexibly address the differing questions and restrictions posed by a variety of human pathogens. The modular Augur interface has enabled phylogenetic and genomic epidemiological analyses by academic researchers, public health laboratories, and private companies. Most recently, these tools have supported the real-time tracking of SARS-CoV-2 evolution at global and local scales [@NextstrainNcov2020; @Bedford2020; @Alm2020]. This success has attracted contributions from the open source community that have allowed us to improve Augur's functionality, documentation, and test coverage. To facilitate Augur's continued use as part of wider bioinformatics pipelines in public health, we have committed to work with and contribute to open data standards such as PHA4GE [@griffiths_pha4ge_2020] and follow recommendations for open pathogen genomic analyses [@Black2020]. Augur can be installed from PyPI ([nextstrain-augur](https://pypi.org/project/nextstrain-augur/)) and Bioconda ([augur](https://bioconda.github.io/recipes/augur/README.html)). [See the full documentation](http://docs.nextstrain.org/) for more details about how to use or contribute to development of Augur. # Figures ![Example workflows composed with Snakemake from Augur commands for A) Zika virus, B) tuberculosis, C) a BEAST analysis, and D) the Nextstrain SARS-CoV-2 pipeline as of 2020-11-27. Each node in the workflow graph represents a command that performs a specific part of the analysis (e.g., aligning sequences, building a tree, etc.) with Augur commands in black, external software in red, and custom scripts in blue. A typical workflow starts by filtering sequences and metadata to a desired subset for analysis followed by inference of a phylogeny, annotation of that phylogeny, and export of the annotated phylogeny to a JSON that can be viewed on Nextstrain. Workflows for viral (A) and bacterial (B) pathogens follow a similar structure but also support custom pathogen-specific steps. Augur's modularity enables workflows that build on outputs from other tools in the field like BEAST (C) as well as more complicated analyses such as that behind Nextstrain's daily SARS-CoV-2 builds (D) which often require custom scripts to perform analysis-specific steps. Multiple outgoing edges from a single node represent opportunities to run the workflow in parallel. See the full workflows behind A, B, and D at https://github.com/nextstrain/zika-tutorial, https://github.com/nextstrain/tb, and https://github.com/nextstrain/ncov. \label{fig:example-workflows}](example-modular-augur-workflows.pdf) # Acknowledgments Thank you to all of [the open source community members who have contributed to Augur](https://github.com/nextstrain/augur/graphs/contributors). Specifically, we thank Eric Danielson, Eddie Lebow, Barney Potter, Ryan Grout, Sai Kiran Kollapudi, Mingye Wang, Carol Willing, Louise Moncla, Thomas Caswell, Sidney Bell, Terry Jones, Christian Clauss, Julien Bordellier, Gytis Dudas, Cameron Devine, Samuel Zhang, Akshay Subramanian, Christopher Tomkins-Tinch, Danielle Kain, Pierre Barrat-Charlaix, Rhys Kidd, Chris Woszczak, Tony Tung, Mathias Walter, and Zachary Sailer. Thank you to Dan Fornika from BCCDC Public Health Laboratory for creating the first conda recipe for Augur in Bioconda. JHu is a Graduate Research Fellow and is supported by the NIH grant NIAID F31AI140714. TB is a Pew Biomedical Scholar. RAN and EBH are supported by University of Basel core funding. This work is supported by NIH awards NIGMS R35 GM119774-01, NIAID U19 AI117891-01 and NIAID R01 AI127893-01. # References augur-24.2.2/paper/template.tex000066400000000000000000000323711456376326500164170ustar00rootroot00000000000000% Options for packages loaded elsewhere \PassOptionsToPackage{unicode$for(hyperrefoptions)$,$hyperrefoptions$$endfor$}{hyperref} \PassOptionsToPackage{hyphens}{url} $if(colorlinks)$ \PassOptionsToPackage{dvipsnames,svgnames*,x11names*}{xcolor} $endif$ $if(dir)$ $if(latex-dir-rtl)$ \PassOptionsToPackage{RTLdocument}{bidi} $endif$ $endif$ $if(CJKmainfont)$ \PassOptionsToPackage{space}{xeCJK} $endif$ % \documentclass[ $if(fontsize)$ $fontsize$, $endif$ $if(lang)$ $babel-lang$, $endif$ $if(papersize)$ $papersize$paper, $endif$ $if(beamer)$ ignorenonframetext, $if(handout)$ handout, $endif$ $if(aspectratio)$ aspectratio=$aspectratio$, $endif$ $endif$ $for(classoption)$ $classoption$$sep$, $endfor$ ]{$documentclass$} $if(beamer)$ $if(background-image)$ \usebackgroundtemplate{% \includegraphics[width=\paperwidth]{$background-image$}% } $endif$ \usepackage{pgfpages} \setbeamertemplate{caption}[numbered] \setbeamertemplate{caption label separator}{: } \setbeamercolor{caption name}{fg=normal text.fg} \beamertemplatenavigationsymbols$if(navigation)$$navigation$$else$empty$endif$ $for(beameroption)$ \setbeameroption{$beameroption$} $endfor$ % Prevent slide breaks in the middle of a paragraph \widowpenalties 1 10000 \raggedbottom $if(section-titles)$ \setbeamertemplate{part page}{ \centering \begin{beamercolorbox}[sep=16pt,center]{part title} \usebeamerfont{part title}\insertpart\par \end{beamercolorbox} } \setbeamertemplate{section page}{ \centering \begin{beamercolorbox}[sep=12pt,center]{part title} \usebeamerfont{section title}\insertsection\par \end{beamercolorbox} } \setbeamertemplate{subsection page}{ \centering \begin{beamercolorbox}[sep=8pt,center]{part title} \usebeamerfont{subsection title}\insertsubsection\par \end{beamercolorbox} } \AtBeginPart{ \frame{\partpage} } \AtBeginSection{ \ifbibliography \else \frame{\sectionpage} \fi } \AtBeginSubsection{ \frame{\subsectionpage} } $endif$ $endif$ $if(beamerarticle)$ \usepackage{beamerarticle} % needs to be loaded first $endif$ $if(fontfamily)$ \usepackage[$for(fontfamilyoptions)$$fontfamilyoptions$$sep$,$endfor$]{$fontfamily$} $else$ \usepackage{lmodern} $endif$ $if(linestretch)$ \usepackage{setspace} $endif$ \usepackage{amssymb,amsmath} \usepackage{ifxetex,ifluatex} \ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex \usepackage[$if(fontenc)$$fontenc$$else$T1$endif$]{fontenc} \usepackage[utf8]{inputenc} \usepackage{textcomp} % provide euro and other symbols \else % if luatex or xetex $if(mathspec)$ \ifxetex \usepackage{mathspec} \else \usepackage{unicode-math} \fi $else$ \usepackage{unicode-math} $endif$ \defaultfontfeatures{Scale=MatchLowercase} \defaultfontfeatures[\rmfamily]{Ligatures=TeX,Scale=1} $if(mainfont)$ \setmainfont[$for(mainfontoptions)$$mainfontoptions$$sep$,$endfor$]{$mainfont$} $endif$ $if(sansfont)$ \setsansfont[$for(sansfontoptions)$$sansfontoptions$$sep$,$endfor$]{$sansfont$} $endif$ $if(monofont)$ \setmonofont[$for(monofontoptions)$$monofontoptions$$sep$,$endfor$]{$monofont$} $endif$ $for(fontfamilies)$ \newfontfamily{$fontfamilies.name$}[$for(fontfamilies.options)$$fontfamilies.options$$sep$,$endfor$]{$fontfamilies.font$} $endfor$ $if(mathfont)$ $if(mathspec)$ \ifxetex \setmathfont(Digits,Latin,Greek)[$for(mathfontoptions)$$mathfontoptions$$sep$,$endfor$]{$mathfont$} \else \setmathfont[$for(mathfontoptions)$$mathfontoptions$$sep$,$endfor$]{$mathfont$} \fi $else$ \setmathfont[$for(mathfontoptions)$$mathfontoptions$$sep$,$endfor$]{$mathfont$} $endif$ $endif$ $if(CJKmainfont)$ \ifxetex \usepackage{xeCJK} \setCJKmainfont[$for(CJKoptions)$$CJKoptions$$sep$,$endfor$]{$CJKmainfont$} \fi $endif$ $if(luatexjapresetoptions)$ \ifluatex \usepackage[$for(luatexjapresetoptions)$$luatexjapresetoptions$$sep$,$endfor$]{luatexja-preset} \fi $endif$ $if(CJKmainfont)$ \ifluatex \usepackage[$for(luatexjafontspecoptions)$$luatexjafontspecoptions$$sep$,$endfor$]{luatexja-fontspec} \setmainjfont[$for(CJKoptions)$$CJKoptions$$sep$,$endfor$]{$CJKmainfont$} \fi $endif$ \fi $if(beamer)$ $if(theme)$ \usetheme[$for(themeoptions)$$themeoptions$$sep$,$endfor$]{$theme$} $endif$ $if(colortheme)$ \usecolortheme{$colortheme$} $endif$ $if(fonttheme)$ \usefonttheme{$fonttheme$} $endif$ $if(mainfont)$ \usefonttheme{serif} % use mainfont rather than sansfont for slide text $endif$ $if(innertheme)$ \useinnertheme{$innertheme$} $endif$ $if(outertheme)$ \useoutertheme{$outertheme$} $endif$ $endif$ % Use upquote if available, for straight quotes in verbatim environments \IfFileExists{upquote.sty}{\usepackage{upquote}}{} \IfFileExists{microtype.sty}{% use microtype if available \usepackage[$for(microtypeoptions)$$microtypeoptions$$sep$,$endfor$]{microtype} \UseMicrotypeSet[protrusion]{basicmath} % disable protrusion for tt fonts }{} $if(indent)$ $else$ \makeatletter \@ifundefined{KOMAClassName}{% if non-KOMA class \IfFileExists{parskip.sty}{% \usepackage{parskip} }{% else \setlength{\parindent}{0pt} \setlength{\parskip}{6pt plus 2pt minus 1pt}} }{% if KOMA class \KOMAoptions{parskip=half}} \makeatother $endif$ $if(verbatim-in-note)$ \usepackage{fancyvrb} $endif$ \usepackage{xcolor} \IfFileExists{xurl.sty}{\usepackage{xurl}}{} % add URL line breaks if available \IfFileExists{bookmark.sty}{\usepackage{bookmark}}{\usepackage{hyperref}} \hypersetup{ $if(title-meta)$ pdftitle={$title-meta$}, $endif$ $if(author-meta)$ pdfauthor={$author-meta$}, $endif$ $if(lang)$ pdflang={$lang$}, $endif$ $if(subject)$ pdfsubject={$subject$}, $endif$ $if(keywords)$ pdfkeywords={$for(keywords)$$keywords$$sep$, $endfor$}, $endif$ $if(colorlinks)$ colorlinks=true, linkcolor=$if(linkcolor)$$linkcolor$$else$Maroon$endif$, filecolor=$if(filecolor)$$filecolor$$else$Maroon$endif$, citecolor=$if(citecolor)$$citecolor$$else$Blue$endif$, urlcolor=$if(urlcolor)$$urlcolor$$else$Blue$endif$, $else$ hidelinks, $endif$ pdfcreator={LaTeX via pandoc}} \urlstyle{same} % disable monospaced font for URLs $if(verbatim-in-note)$ \VerbatimFootnotes % allow verbatim text in footnotes $endif$ $if(geometry)$ $if(beamer)$ \geometry{$for(geometry)$$geometry$$sep$,$endfor$} $else$ \usepackage[$for(geometry)$$geometry$$sep$,$endfor$]{geometry} $endif$ $endif$ $if(beamer)$ \newif\ifbibliography $endif$ $if(listings)$ \usepackage{listings} \newcommand{\passthrough}[1]{#1} \lstset{defaultdialect=[5.3]Lua} \lstset{defaultdialect=[x86masm]Assembler} $endif$ $if(lhs)$ \lstnewenvironment{code}{\lstset{language=Haskell,basicstyle=\small\ttfamily}}{} $endif$ $if(highlighting-macros)$ $highlighting-macros$ $endif$ $if(tables)$ \usepackage{longtable,booktabs} $if(beamer)$ \usepackage{caption} % Make caption package work with longtable \makeatletter \def\fnum@table{\tablename~\thetable} \makeatother $else$ % Correct order of tables after \paragraph or \subparagraph \usepackage{etoolbox} \makeatletter \patchcmd\longtable{\par}{\if@noskipsec\mbox{}\fi\par}{}{} \makeatother % Allow footnotes in longtable head/foot \IfFileExists{footnotehyper.sty}{\usepackage{footnotehyper}}{\usepackage{footnote}} \makesavenoteenv{longtable} $endif$ $endif$ $if(graphics)$ \usepackage{graphicx} \makeatletter \def\maxwidth{\ifdim\Gin@nat@width>\linewidth\linewidth\else\Gin@nat@width\fi} \def\maxheight{\ifdim\Gin@nat@height>\textheight\textheight\else\Gin@nat@height\fi} \makeatother % Scale images if necessary, so that they will not overflow the page % margins by default, and it is still possible to overwrite the defaults % using explicit options in \includegraphics[width, height, ...]{} \setkeys{Gin}{width=\maxwidth,height=\maxheight,keepaspectratio} % Set default figure placement to htbp \makeatletter \def\fps@figure{htbp} \makeatother $endif$ $if(links-as-notes)$ % Make links footnotes instead of hotlinks: \DeclareRobustCommand{\href}[2]{#2\footnote{\url{#1}}} $endif$ $if(strikeout)$ \usepackage[normalem]{ulem} % Avoid problems with \sout in headers with hyperref \pdfstringdefDisableCommands{\renewcommand{\sout}{}} $endif$ \setlength{\emergencystretch}{3em} % prevent overfull lines \providecommand{\tightlist}{% \setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}} $if(numbersections)$ \setcounter{secnumdepth}{$if(secnumdepth)$$secnumdepth$$else$5$endif$} $else$ \setcounter{secnumdepth}{-\maxdimen} % remove section numbering $endif$ $if(beamer)$ $else$ $if(block-headings)$ % Make \paragraph and \subparagraph free-standing \ifx\paragraph\undefined\else \let\oldparagraph\paragraph \renewcommand{\paragraph}[1]{\oldparagraph{#1}\mbox{}} \fi \ifx\subparagraph\undefined\else \let\oldsubparagraph\subparagraph \renewcommand{\subparagraph}[1]{\oldsubparagraph{#1}\mbox{}} \fi $endif$ $endif$ $if(pagestyle)$ \pagestyle{$pagestyle$} $endif$ $for(header-includes)$ $header-includes$ $endfor$ $if(lang)$ \ifxetex % Load polyglossia as late as possible: uses bidi with RTL langages (e.g. Hebrew, Arabic) \usepackage{polyglossia} \setmainlanguage[$for(polyglossia-lang.options)$$polyglossia-lang.options$$sep$,$endfor$]{$polyglossia-lang.name$} $for(polyglossia-otherlangs)$ \setotherlanguage[$for(polyglossia-otherlangs.options)$$polyglossia-otherlangs.options$$sep$,$endfor$]{$polyglossia-otherlangs.name$} $endfor$ \else \usepackage[shorthands=off,$for(babel-otherlangs)$$babel-otherlangs$,$endfor$main=$babel-lang$]{babel} $if(babel-newcommands)$ $babel-newcommands$ $endif$ \fi $endif$ \ifluatex \usepackage{selnolig} % disable illegal ligatures \fi $if(dir)$ \ifxetex % Load bidi as late as possible as it modifies e.g. graphicx \usepackage{bidi} \fi \ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex \TeXXeTstate=1 \newcommand{\RL}[1]{\beginR #1\endR} \newcommand{\LR}[1]{\beginL #1\endL} \newenvironment{RTL}{\beginR}{\endR} \newenvironment{LTR}{\beginL}{\endL} \fi $endif$ $if(natbib)$ \usepackage[$natbiboptions$]{natbib} \bibliographystyle{$if(biblio-style)$$biblio-style$$else$plainnat$endif$} $endif$ $if(biblatex)$ \usepackage[$if(biblio-style)$style=$biblio-style$,$endif$$for(biblatexoptions)$$biblatexoptions$$sep$,$endfor$]{biblatex} $for(bibliography)$ \addbibresource{$bibliography$} $endfor$ $endif$ $if(csl-refs)$ \newlength{\cslhangindent} \setlength{\cslhangindent}{1.5em} \newlength{\csllabelwidth} \setlength{\csllabelwidth}{3em} \newenvironment{CSLReferences}[3] % #1 hanging-ident, #2 entry sp {% don't indent paragraphs \setlength{\parindent}{0pt} % turn on hanging indent if param 1 is 1 \ifodd #1 \everypar{\setlength{\hangindent}{\cslhangindent}}\ignorespaces\fi % set line spacing % set entry spacing \ifnum #2 > 0 \setlength{\parskip}{#3\baselineskip} \fi }% {} \usepackage{calc} % for \widthof, \maxof \newcommand{\CSLBlock}[1]{#1\hfill\break} \newcommand{\CSLLeftMargin}[1]{\parbox[t]{\maxof{\widthof{#1}}{\csllabelwidth}}{#1}} \newcommand{\CSLRightInline}[1]{\parbox[t]{\linewidth}{#1}} \newcommand{\CSLIndent}[1]{\hspace{\cslhangindent}#1} $endif$ $if(title)$ \title{$title$$if(thanks)$\thanks{$thanks$}$endif$} $endif$ $if(subtitle)$ $if(beamer)$ $else$ \usepackage{etoolbox} \makeatletter \providecommand{\subtitle}[1]{% add subtitle to \maketitle \apptocmd{\@title}{\par {\large #1 \par}}{}{} } \makeatother $endif$ \subtitle{$subtitle$} $endif$ \usepackage{authblk} \renewcommand\Authfont{\normalsize \bf} \renewcommand\Affilfont{\small \normalfont} \makeatletter \renewcommand\AB@affilsepx{, \protect\Affilfont} \makeatother $if(authors)$ $for(authors)$ $if(authors.affiliation)$ \author[$authors.affiliation$]{$authors.name$} $else$ \author{$authors.name$} $endif$ $endfor$ $endif$ $if(affiliations)$ $for(affiliations)$ \affil[$affiliations.index$]{$affiliations.name$} $endfor$ $endif$ \date{\vspace{-5ex}} $if(beamer)$ $if(institute)$ \institute{$for(institute)$$institute$$sep$ \and $endfor$} $endif$ $if(titlegraphic)$ \titlegraphic{\includegraphics{$titlegraphic$}} $endif$ $if(logo)$ \logo{\includegraphics{$logo$}} $endif$ $endif$ \begin{document} $if(has-frontmatter)$ \frontmatter $endif$ $if(title)$ $if(beamer)$ \frame{\titlepage} $else$ \maketitle $endif$ $if(abstract)$ \begin{abstract} $abstract$ \end{abstract} $endif$ $endif$ $for(include-before)$ $include-before$ $endfor$ $if(toc)$ $if(toc-title)$ \renewcommand*\contentsname{$toc-title$} $endif$ $if(beamer)$ \begin{frame}[allowframebreaks] $if(toc-title)$ \frametitle{$toc-title$} $endif$ \tableofcontents[hideallsubsections] \end{frame} $else$ { $if(colorlinks)$ \hypersetup{linkcolor=$if(toccolor)$$toccolor$$else$$endif$} $endif$ \setcounter{tocdepth}{$toc-depth$} \tableofcontents } $endif$ $endif$ $if(lot)$ \listoftables $endif$ $if(lof)$ \listoffigures $endif$ $if(linestretch)$ \setstretch{$linestretch$} $endif$ $if(has-frontmatter)$ \mainmatter $endif$ $body$ $if(has-frontmatter)$ \backmatter $endif$ $if(natbib)$ $if(bibliography)$ $if(biblio-title)$ $if(has-chapters)$ \renewcommand\bibname{$biblio-title$} $else$ \renewcommand\refname{$biblio-title$} $endif$ $endif$ $if(beamer)$ \begin{frame}[allowframebreaks]{$biblio-title$} \bibliographytrue $endif$ \bibliography{$for(bibliography)$$bibliography$$sep$,$endfor$} $if(beamer)$ \end{frame} $endif$ $endif$ $endif$ $if(biblatex)$ $if(beamer)$ \begin{frame}[allowframebreaks]{$biblio-title$} \bibliographytrue \printbibliography[heading=none] \end{frame} $else$ \printbibliography$if(biblio-title)$[title=$biblio-title$]$endif$ $endif$ $endif$ $for(include-after)$ $include-after$ $endfor$ \end{document} augur-24.2.2/pytest.python3.ini000066400000000000000000000013741456376326500164060ustar00rootroot00000000000000[pytest] # ignore biopython's deprecation warnings about alphabet that are outside of our control filterwarnings = ignore::PendingDeprecationWarning:Bio.Alphabet ignore:Coverage disabled addopts = # do not capture any output---necessary for interactive breakpoints -s # report any tests that are skipped, xfailed, or xpassed -rsxX # report local variables with every stack trace -l # output verbosity # show individual test names -vv # run any doctests found in .py modules --doctest-modules # calculate test coverage for the `augur` module --cov=augur # add html coverage report generation --cov-report=html # output short traceback --tb=short testpaths = augur/ tests/ augur-24.2.2/run_tests.sh000077500000000000000000000013431456376326500153330ustar00rootroot00000000000000#!/bin/sh # Default to running all tests. partial_test=0 # If user requests a subset of tests for pytest, note this preference to avoid # running other tests. case "$@" in *-k*) partial_test=1 ;; esac if [ "$partial_test" = 1 ]; then # skip test coverage when running a subset of the test suite coverage_arg='--no-cov' else coverage_arg='' fi echo "Running unit tests and doctests with pytest" python3 -m pytest -c pytest.python3.ini $coverage_arg "$@" # Only run functional tests if we are not running a subset of tests for pytest. if [ "$partial_test" = 0 ]; then echo "Running functional tests with cram" cram tests/ else echo "Skipping functional tests when running a subset of unit tests" fi exit $? augur-24.2.2/scripts/000077500000000000000000000000001456376326500144345ustar00rootroot00000000000000augur-24.2.2/scripts/README.md000066400000000000000000000000561456376326500157140ustar00rootroot00000000000000# Conversion scrips Run from this directory. augur-24.2.2/scripts/beast-to-auspice-jsons-proof-of-principle.py000066400000000000000000000113771456376326500250260ustar00rootroot00000000000000from __future__ import print_function from Bio import Phylo import imp from StringIO import StringIO import json def modified_tree_to_json(node, extra_attr = []): tree_json = {} str_attr = ['strain','attr'] num_attr = ['xvalue', 'yvalue', 'tvalue', 'num_date', 'clade'] if hasattr(node, 'name'): tree_json['strain'] = node.name for prop in str_attr: if hasattr(node, prop): tree_json[prop] = node.__getattribute__(prop) for prop in num_attr: if hasattr(node, prop): try: tree_json[prop] = round(node.__getattribute__(prop),5) except: print("cannot round:", node.__getattribute__(prop), "assigned as is") tree_json[prop] = node.__getattribute__(prop) for prop in extra_attr: if len(prop)==2 and callable(prop[1]): if hasattr(node, prop[0]): tree_json[prop] = prop[1](node.__getattribute__(prop[0])) else: if hasattr(node, prop): tree_json[prop] = node.__getattribute__(prop) if node.clades: tree_json["children"] = [] for ch in node.clades: tree_json["children"].append(modified_tree_to_json(ch, extra_attr)) return tree_json def mock_meta_json(n): meta = {} meta["updated"] = "today" meta["virus_count"] = n meta["title"] = "BEAST proof of principle (MERS-CoV)" meta["color_options"] = { "host": { "menuItem": "host", "type": "discrete", "legendTitle": "host", "key": "host" }, "type.prob": { "menuItem": "host.prob", "type": "continuous", "legendTitle": "host.prob", "key": "type.prob" }, "posterior": { "menuItem": "posterior", "type": "continuous", "legendTitle": "posterior", "key": "posterior" }, } meta["filters"] = ["type"] meta["commit"] = "unknown" meta["panels"] = ["tree"] meta["geo"] = {} return meta; if __name__=="__main__": print("This is a proof of principle script - it should not be relied upon for analysis.") try: bt = imp.load_source('baltic', '/Users/james/blab/baltic/baltic.py') except IOError: bt = imp.load_source('baltic', '/Users/evogytis/Documents/BLAB_baltic/baltic.py') # set_trace() bt_tree=bt.loadNexus('./scratch/MERS_274_sCoal.combinedTyped.mcc.tree',tip_regex='\|([0-9\-]+)$') ## loads a BEAST nexus file mostRecentTip=max([k.absoluteTime for k in bt_tree.Objects]) simplified_tree=bt_tree.toString() ## returns a newick string without beast annotations xml_tree=Phylo.read(StringIO(simplified_tree),'newick') ## load simplified newick as a biopython XML tree xml_nodes=xml_tree.get_nonterminals(order='preorder') ## fetch nodes from XML tree bt_nodes=[k for k in bt_tree.traverse_tree(include_all=True) if k.branchType=='node'] ## fetch nodes from baltic tree xml_leaves=xml_tree.get_terminals(order='preorder') ## fetch leaves from XML tree bt_leaves=[k for k in bt_tree.traverse_tree()] ## fetch leaves from baltic tree for pairs in [[xml_nodes,bt_nodes],[xml_leaves,bt_leaves]]: for x,b in zip(*pairs): ## iterate over pairs of branches in both trees setattr(x,'tvalue',b.height) ## height in years setattr(x,'xvalue',b.height) ## 0.0 in the future? setattr(x,'yvalue',b.y) ## y value after drawing setattr(x,'clade',b.index) ## clade attrs={} if b.absoluteTime!=None: attrs['num_date']=b.absoluteTime else: attrs['num_date']=bt_tree.Objects[0].absoluteTime if b.traits.has_key('height_95%_HPD'): attrs['num_date_confidence']=[mostRecentTip-t for t in b.traits['height_95%_HPD']] if b.branchType=='node': setattr(x,'name',b.index) if b.traits.has_key('type'): attrs['host'] = b.traits['type'] for trait in b.traits: ## iterate over MCC traits, transfer into attrs dict if 'set.prob' in trait: ## all posterior sets converted to confidences tr=trait.split('.')[0] confidence={t:p for t,p in zip(b.traits['%s.set'%(tr)],b.traits['%s.set.prob'%(tr)])} attrs['%s_confidence'%(tr)]=confidence attrs[trait]=b.traits[trait] setattr(x,'attr',attrs) tree_json = modified_tree_to_json(xml_tree.clade) tree_json = tree_json["children"][0] json.dump(tree_json, open("scratch/mers_tree.json", 'w'), indent=2) meta_json = mock_meta_json(len(bt_leaves)) json.dump(meta_json, open("scratch/mers_meta.json", 'w'), indent=2) json.dump({}, open("scratch/mers_sequences.json", 'w'), indent=2) # set_trace() # attrs: tree_json['children'][0]['attr'].keys() augur-24.2.2/scripts/compare-json-vcf.py000066400000000000000000000067301456376326500201650ustar00rootroot00000000000000import argparse from Bio import SeqIO from treetime.vcf_utils import read_vcf import sys, json from augur.utils import read_tree from collections import defaultdict if __name__=="__main__": parser = argparse.ArgumentParser(description = "Compare mutations in VCF vs JSON") parser.add_argument('--json', required=True, type=str, help="node-data JSON from augur ancestral") parser.add_argument('--vcf', required=True, type=str, help="VCF output from augur ancestral") parser.add_argument('--ref', required=True, type=str, help="reference fasta (supplied to augur ancestral)") parser.add_argument('--tree', required=True, type=str, help="newick tree (supplied to augur ancestral)") args = parser.parse_args() vcf = read_vcf(args.vcf, args.ref) ref = str(SeqIO.read(args.ref, 'fasta').seq).upper() with open(args.json) as fh: ndj = json.load(fh) T = read_tree(args.tree) mask = ndj['mask'] # import pdb; pdb.set_trace() assert ndj['reference']['nuc']==ref, "JSON reference doesn't match provided FASTA" # Format of vcf seqs: { 'seq1':{4:'A', 7:'-'}, 'seq2':{100:'C'} }, (0-based) v_var = vcf['sequences'] # The parsed VCF only details changes from the ref, but we need # to include the ref alleles to compare to the JSON for name, data in v_var.items(): for pos in vcf['positions']: # 0-based if pos not in data: data[pos] = ref[pos] for mut in ndj['nodes'][T.root.name].get('muts', []): (frm,pos,to) = (mut[0], int(mut[1:-1])-1, mut[-1]) assert ref[pos]==frm, f"JSON: Mutation at root node {mut!r} disagrees with reference {ref[pos]!r}" j_var = defaultdict(dict) j_positions = set() # 0-based for clade in T.find_clades(): # print("Clade", clade) muts = ndj['nodes'][clade.name].get('muts', []) for descendant in clade.find_clades(): # includes clade itself # print(f"\t{descendant}") for mut in muts: (frm,pos,to) = (mut[0], int(mut[1:-1])-1, mut[-1]) j_positions.add(pos) j_var[descendant.name][pos]=to # For variable sites, fill in the nodes above the mutations # with the reference base for clade in T.find_clades(): for pos in j_positions: if pos not in j_var[clade.name]: j_var[clade.name][pos] = ref[pos] problems_found = False for name in set(list(j_var.keys()) + list(v_var.keys())): vp = set(v_var[name].keys()) jp = set(j_var[name].keys()) if len(vp - jp): print(f"{name} had extra positions in VCF") problems_found=True if len(jp - vp): print(f"{name} had extra positions in JSON") problems_found=True for pos in jp.union(vp): try: jallele = j_var[name][pos] except KeyError: print(f"{name}. VCF had pos {pos+1} but JSON didn't. Allele: {v_var[name][pos]}. JSON mask: {bool(mask[pos])}") problems_found=True continue try: vallele = v_var[name][pos] except KeyError: print(f"{name}. JSON had pos {pos+1} but VCF didn't. Allele: {jallele}") problems_found=True continue if jallele!=vallele: print(f"{name} pos {pos+1} VCF: {vallele} JSON: {jallele}") problems_found=True sys.exit(2 if problems_found else 0)augur-24.2.2/scripts/diff_jsons.py000066400000000000000000000031001456376326500171240ustar00rootroot00000000000000"""Compare JSON files line by line with deepdiff """ import argparse import deepdiff import json if __name__ == "__main__": parser = argparse.ArgumentParser( description="Compare JSON files line by line with deepdiff", formatter_class=argparse.ArgumentDefaultsHelpFormatter ) parser.add_argument("first_json", help="first JSON to compare") parser.add_argument("second_json", help="second JSON to compare") parser.add_argument("--significant-digits", type=int, default=5, help="number of significant digits to use when comparing numeric values") parser.add_argument("--exclude-paths", nargs="+", help="list of paths to exclude from consideration when performing a diff", default=["root['generated_by']['version']"]) parser.add_argument("--exclude-regex-paths", nargs="+", help="list of path regular expressions to exclude from consideration when performing a diff") parser.add_argument("--ignore-numeric-type-changes", action="store_true", help="ignore numeric type changes in the diff (e.g., int of 1 to float of 1.0)") args = parser.parse_args() with open(args.first_json, "r") as fh: first_json = json.load(fh) with open(args.second_json, "r") as fh: second_json = json.load(fh) print( deepdiff.DeepDiff( first_json, second_json, significant_digits=args.significant_digits, exclude_paths=args.exclude_paths, exclude_regex_paths=args.exclude_regex_paths, ignore_numeric_type_changes=args.ignore_numeric_type_changes, ) ) augur-24.2.2/scripts/diff_trees.py000066400000000000000000000034411456376326500171220ustar00rootroot00000000000000import argparse import Bio.Phylo import deepdiff def clade_to_items(clade, attrs=("name", "branch_length")): """Recursively convert a clade of a tree to a list of nested lists according to the topology of the clade with the requested attributes per node. Examples -------- >>> from io import StringIO >>> treedata = "(A, (B, C), (D, E))" >>> handle = StringIO(treedata) >>> tree = Bio.Phylo.read(handle, "newick") >>> clade_to_items(tree.root) [[None, None], [['A', None]], [[None, None], [['B', None]], [['C', None]]], [[None, None], [['D', None]], [['E', None]]]] """ items = [[ getattr(clade, attr) for attr in attrs ]] for child in clade.clades: items.extend([clade_to_items(child)]) return items if __name__ == "__main__": parser = argparse.ArgumentParser(formatter_class=argparse.ArgumentDefaultsHelpFormatter) parser.add_argument("first_tree", help="first Newick tree to compare") parser.add_argument("second_tree", help="second Newick tree to compare") parser.add_argument("--attributes", nargs="+", default=["name", "branch_length"], help="node attributes to include in comparison") parser.add_argument("--significant-digits", type=int, default=5, help="number of significant digits to use when comparing branch lengths") args = parser.parse_args() first_tree = Bio.Phylo.read(args.first_tree, "newick") second_tree = Bio.Phylo.read(args.second_tree, "newick") first_tree_items = clade_to_items(first_tree.root, attrs=args.attributes) second_tree_items = clade_to_items(second_tree.root, attrs=args.attributes) print( deepdiff.DeepDiff( first_tree_items, second_tree_items, significant_digits=args.significant_digits ) ) augur-24.2.2/scripts/identify_emerging_clades.py000066400000000000000000000333241456376326500220160ustar00rootroot00000000000000#!/usr/bin/env python3 # coding: utf-8 """Identify emerging clades from previously defined clades based on a minimum number of new mutations that have reached a minimum frequency in a given region. Example use cases: # Find subclades based on nucleotide mutations with defaults. python3 scripts/identify_emerging_clades.py \ --tree-url http://data.nextstrain.org/ncov_global.json \ --frequencies-url http://data.nextstrain.org/ncov_global_tip-frequencies.json \ --minimum-frequency 0.2 \ --minimum-mutations 3 \ --output-table nuc_subclades_global.tsv # Find region-specific subclades with nucleotide mutations. ## Africa python3 scripts/identify_emerging_clades.py \ --tree-url http://data.nextstrain.org/ncov_africa.json \ --frequencies-url http://data.nextstrain.org/ncov_africa_tip-frequencies.json \ --filter-attribute region \ --filter-value Africa \ --minimum-frequency 0.3 \ --minimum-mutations 3 \ --output-table nuc_subclades_africa.tsv ## Asia python3 scripts/identify_emerging_clades.py \ --tree-url http://data.nextstrain.org/ncov_asia.json \ --frequencies-url http://data.nextstrain.org/ncov_asia_tip-frequencies.json \ --filter-attribute region \ --filter-value Asia \ --minimum-frequency 0.3 \ --minimum-mutations 3 \ --output-table nuc_subclades_asia.tsv ## Europe python3 scripts/identify_emerging_clades.py \ --tree-url http://data.nextstrain.org/ncov_europe.json \ --frequencies-url http://data.nextstrain.org/ncov_europe_tip-frequencies.json \ --filter-attribute region \ --filter-value Europe \ --minimum-frequency 0.3 \ --minimum-mutations 3 \ --output-table nuc_subclades_europe.tsv ## North America python3 scripts/identify_emerging_clades.py \ --tree-url http://data.nextstrain.org/ncov_north-america.json \ --frequencies-url http://data.nextstrain.org/ncov_north-america_tip-frequencies.json \ --filter-attribute region \ --filter-value "North America" \ --minimum-frequency 0.3 \ --minimum-mutations 3 \ --output-table nuc_subclades_north-america.tsv ## Oceania python3 scripts/identify_emerging_clades.py \ --tree-url http://data.nextstrain.org/ncov_oceania.json \ --frequencies-url http://data.nextstrain.org/ncov_oceania_tip-frequencies.json \ --filter-attribute region \ --filter-value Oceania \ --minimum-frequency 0.3 \ --minimum-mutations 3 \ --output-table nuc_subclades_oceania.tsv ## South America python3 scripts/identify_emerging_clades.py \ --tree-url http://data.nextstrain.org/ncov_south-america.json \ --frequencies-url http://data.nextstrain.org/ncov_south-america_tip-frequencies.json \ --filter-attribute region \ --filter-value "South America" \ --minimum-frequency 0.3 \ --minimum-mutations 3 \ --output-table nuc_subclades_south-america.tsv # Find subclades based on spike amino acid mutations. python3 scripts/identify_emerging_clades.py \ --tree-url http://data.nextstrain.org/ncov_global.json \ --frequencies-url http://data.nextstrain.org/ncov_global_tip-frequencies.json \ --nextstrain-url https://nextstrain.org/ncov/global \ --mutation-region S \ --minimum-mutations 1 \ --minimum-frequency 0.1 \ --output-table spike_subclades.tsv \ --output-html spike_subclades.html """ import argparse from augur.utils import json_to_tree import json import numpy as np import pandas as pd import requests import sys if __name__ == '__main__': parser = argparse.ArgumentParser( description="Identify emerging clades from previously defined clades.", formatter_class=argparse.ArgumentDefaultsHelpFormatter ) parser.add_argument("--tree-url", required=True, help="URL for a Nextstrain tree JSON") parser.add_argument("--frequencies-url", required=True, help="URL for a Nextstrain tip frequencies JSON") parser.add_argument("--nextstrain-url", help="URL for the corresponding Nextstrain build") parser.add_argument("--clade-membership-attribute", default="clade_membership", help="name of the attribute in the tree JSON to use for clade membership") parser.add_argument("--mutation-region", default="nuc", help="region of the genome to inspect for mutations") parser.add_argument("--minimum-mutations", default=2, type=int, help="minimum number of mutations to require for subclade since its annotated parent clade") parser.add_argument("--minimum-frequency", default=0.2, type=float, help="minimum frequency that a subclade must have been observed at") parser.add_argument("--minimum-timepoints-at-frequency", default=5, type=int, help="minimum number of timepoints a given subclade must have met the frequency threshold") parser.add_argument("--filter-attribute", help="name of a node attribute in the tree JSON to filter tips by and correspondingly renormalize frequencies to only those tips") parser.add_argument("--filter-value", help="value of the associated node attribute in the tree JSON to filter tips by") parser.add_argument("--output-table", required=True, help="tab-delimited data frame with mutations per putative subclade") parser.add_argument("--output-html", help="optional HTML page with links to the given Nextstrain build highlighting positions from each putative subclade") args = parser.parse_args() # Define inputs. tree_url = args.tree_url frequencies_url = args.frequencies_url nextstrain_url = args.nextstrain_url # Define parameters. clade_membership_attribute = args.clade_membership_attribute mutation_region = args.mutation_region minimum_mutations = args.minimum_mutations minimum_frequency = args.minimum_frequency minimum_timepoints_at_frequency = args.minimum_timepoints_at_frequency filter_attribute = args.filter_attribute filter_value = args.filter_value # Define outputs. subclades_table = args.output_table subclades_links = args.output_html if args.output_html is not None and args.nextstrain_url is None: print("WARNING: HTML output requested, but a Nextstrain URL was not provided. Skipping HTML output.", file=sys.stderr) # Load data tree_json = json.loads(requests.get(tree_url).content) tree = json_to_tree(tree_json) frequencies_json = json.loads(requests.get(frequencies_url).content) # Convert frequency lists into numpy arrays for easier summing of frequencies per clade. frequencies = {} for key, values in frequencies_json.items(): if isinstance(values, dict) and "frequencies" in values: frequencies[key] = np.array(values["frequencies"]) pivots = np.array(frequencies_json["pivots"]) # If the user has defined a filter on the tips of the tree, include only those # tips in the frequencies and renormalize them to sum to 1. filtered_frequencies = {} if filter_attribute is not None and filter_value is not None: for tip in tree.find_clades(terminal=True): if filter_attribute in tip.node_attrs and tip.node_attrs[filter_attribute]["value"] == filter_value: filtered_frequencies[tip.name] = frequencies[tip.name] if len(filtered_frequencies) > 0: # Renormalized the remaining frequencies to sum to 1. total_per_timepoint = sum(filtered_frequencies.values()) for strain, strain_frequencies in filtered_frequencies.items(): filtered_frequencies[strain] = strain_frequencies / total_per_timepoint # Confirm the normalized frequencies sum to nearly 1. assert all( np.isclose( np.ones_like(pivots), sum(filtered_frequencies.values()) ) ) # Reassign the global frequencies variable to these filtered frequencies. frequencies = filtered_frequencies else: print("ERROR: None of the tips in the tree passed the given filter.") # Annotate the cumulative number of mutations per node from the root. # Find the internal node representing each distinct clade. clade_node_by_name = {} for node in tree.find_clades(terminal=False): if clade_membership_attribute in node.node_attrs: clade_name = node.node_attrs[clade_membership_attribute]["value"] if clade_name not in clade_node_by_name: clade_node_by_name[clade_name] = node # Find mutations in descendants of clades. # # For each major previously identified clade, look for descendant clades that # have accumulated a minimum number of mutations from the original parent clade # and that have been observed at a minimum frequency for a minimum number of # timepoints. # # Track all positions with mutations on the path from the parent clade to the # putative clade's node in the tree. subclades = [] for clade_name, clade in clade_node_by_name.items(): # Look at all internal nodes descending from the current clade. for node in clade.find_clades(terminal=False): # Skip internal nodes with one tip. These tend to be "travel history" placeholder nodes. if len(node.clades) == 1: continue # Skip nodes that belong to a different clade. This handles the case where currently # annotated clades are nested within each other. if node.node_attrs[clade_membership_attribute] != clade.node_attrs[clade_membership_attribute]: continue # The first node in the loop will be the current clade, so initialize the state of the mutation # count and sets. if node == clade: node.mutation_count = 0 node.mutation_set = set() else: # Each descendant starts with the mutations found on the path # from the annotated clade node to the descendant's parent. node.mutation_count = node.parent.mutation_count node.mutation_set = node.parent.mutation_set.copy() # Extract positions of mutations in the requested region # (e.g., "nuc", "S", "E", etc.). Each mutation has the form # of "C1059T" where the first and last character are the # ancestral and derived alleles and the remaining characters # are the integer position in the region. if hasattr(node, "branch_attrs") and mutation_region in node.branch_attrs["mutations"]: positions = set([ int(mutation[1:-1]) for mutation in node.branch_attrs["mutations"][mutation_region] ]) node.mutation_count += len(positions) node.mutation_set.update(positions) if node.mutation_count >= minimum_mutations: # Sum frequencies per timepoint of tips descending from this node to get the node's frequencies. node_frequencies = sum( frequencies.get(tip.name, np.zeros_like(pivots)) for tip in node.find_clades(terminal=True) ) # If this node has been observed at the minimum frequency # for the minimum number of timepoints (not necessarily consecutive), # add it to the list of subclade candidates. timepoints_above_frequency = sum(node_frequencies >= minimum_frequency) if timepoints_above_frequency >= minimum_timepoints_at_frequency: # Create a comma-delimited list of positions for copying/pasting # into Nextstrain's color by genotype field. mutation_positions = ",".join([ str(position) for position in sorted(node.mutation_set) ]) subclades.append({ "parent_clade": clade_name, "node": node.name, "node_date": np.round(node.node_attrs["num_date"]["value"], 2), "timepoints_above_frequency": timepoints_above_frequency, "mutations": mutation_positions }) if len(subclades) == 0: print("ERROR: no putative subclades were found for the given parameters.", file=sys.stderr) sys.exit(1) # Create a data frame of putative subclades and drop redundant collections of # mutations, keeping only the earliest node with those mutations. subclades = pd.DataFrame(subclades) distinct_subclades = subclades.sort_values(["parent_clade", "node_date"]).groupby("mutations").first().reset_index() distinct_subclades["mutation_region"] = mutation_region # Save distinct subclades. distinct_subclades.to_csv(subclades_table, sep="\t", index=False) print(f"Found {distinct_subclades.shape[0]} distinct subclades") if args.output_html and args.nextstrain_url: # Create an HTML page with links out to Nextstrain colored by genotype # at the positions associated with each putative subclade. with open(subclades_links, "w") as oh: print("", file=oh) augur-24.2.2/scripts/json_tree_to_nexus.py000066400000000000000000000055101456376326500207230ustar00rootroot00000000000000from __future__ import print_function import sys sys.path.append('..') import json from base.io_util import json_to_tree from base.utils import save_as_nexus import Bio.Phylo import argparse def collect_args(): parser = argparse.ArgumentParser(description = "Prepare fauna FASTA for analysis") parser.add_argument('-t', '--tree', required=True, type=str, help="JSON tree file") parser.add_argument('--resolve', action="store_true", help="resolve polytomies") parser.add_argument('--temporal', action="store_true", help="export branch lengths in time") parser.add_argument('-o', '--outfile', type=str, default=None, help="output nexus filename (optional)") return parser.parse_args() def resolve_polytomies(tree): def assign_attrs(node, source): # Assign all non-children attributes. for attr, value in source.__dict__.items(): if attr != "children": setattr(node, attr, value) # node.xvalue = 0 # node.attr["div"] = 0 def order_children_in_place(clades): clades.sort(key=lambda x: x.attr["div"]) clades.sort(key=lambda x: x.attr["num_date"]) def ladderise_node(node): """input: node object with 2 or more chilred returns node object but with 2 children. One of which may be a polytomy""" if len(node.clades) == 2: return node order_children_in_place(node.clades) new_node = Bio.Phylo.Newick.Clade() if "resolved" in node.name: tmp = node.name.split("_") new_node.name = "_".join(tmp[:-1]) + "_" + str(int(tmp[-1] + 1)) else: new_node.name = node.strain + "_resolved_1" assign_attrs(new_node, node) # modifies in place new_node.clades = node.clades[1:] node.clades = [node.clades[0], ladderise_node(new_node)] return node def traverse_and_resolve_first(tree): for clade in tree.find_clades(terminal=False, order="preorder"): if len(clade.clades) != 2: print("resolving ", clade.name, " with ", len(clade.clades), " children using temporal data") clade = ladderise_node(clade) return True return False ## fn start polytomies_exist = True; # stopping condition while polytomies_exist: polytomies_exist = traverse_and_resolve_first(tree) assert(tree.is_bifurcating()) tree.ladderize() if __name__=="__main__": params = collect_args() outfile = params.outfile if params.outfile != None else params.tree.split(".json")[0]+".nex" json_fh = open(params.tree, "r") json_dict = json.load(json_fh) tree = json_to_tree(json_dict) if params.resolve: resolve_polytomies(tree) if params.temporal: save_as_nexus(tree, outfile, "num_date") else: save_as_nexus(tree, outfile, "div") augur-24.2.2/scripts/plot_msa.py000066400000000000000000000031361456376326500166270ustar00rootroot00000000000000import argparse from Bio import AlignIO from Bio.Align import AlignInfo import matplotlib as mpl mpl.use("Agg") import matplotlib.pyplot as plt import numpy as np def prepare_msa_heatmap(msa_path, consensus_threshold): """Plots a heatmap for the given heatmap. """ msa = AlignIO.read(msa_path, "fasta") summary_align = AlignInfo.SummaryInfo(msa) consensus = summary_align.dumb_consensus(threshold=consensus_threshold) consensus_array = np.asarray(consensus) matches = np.apply_along_axis(lambda row: row == consensus_array, 1, np.asarray(msa)).astype(int) sorted_matches = np.array(sorted(matches, key=lambda row: row.sum(), reverse=True)) return sorted_matches if __name__ == "__main__": parser = argparse.ArgumentParser( description="Finds the consensus for a given MSA and plots a heatmap with a mismatches to the consensus shown in black against white." ) parser.add_argument("msa", help="FASTA file containing a multiple sequence alignment to plot") parser.add_argument("output", help="Binary heatmap of MSA (e.g., msa.pdf)") parser.add_argument("--consensus_threshold", type=float, default=0.3, help="Proportion of sequences to require for consensus") args = parser.parse_args() sorted_matches = prepare_msa_heatmap(args.msa, args.consensus_threshold) fig, ax = plt.subplots(1, 1, figsize=(6, 6)) axes = plt.imshow(sorted_matches, vmin=0, vmax=1, aspect="auto", cmap=plt.get_cmap("gray")) ax.set_xlabel("Alignment position") ax.set_ylabel("Strains") ax.set_yticklabels([]) plt.tight_layout() plt.savefig(args.output) augur-24.2.2/scripts/plot_tree.py000066400000000000000000000126211456376326500170050ustar00rootroot00000000000000import argparse import json import matplotlib as mpl mpl.use("Agg") from matplotlib import gridspec import matplotlib.pyplot as plt from matplotlib.collections import LineCollection import numpy as np import sys sys.path.append('..') from base.io_util import json_to_tree def plot_tree(tree, figure_name, color_by_trait, initial_branch_width, tip_size): """Plot a BioPython Phylo tree in the BALTIC-style. """ # Plot H3N2 tree in BALTIC style from Bio.Phylo tree. mpl.rcParams['savefig.dpi'] = 120 mpl.rcParams['figure.dpi'] = 100 mpl.rcParams['font.weight']=300 mpl.rcParams['axes.labelweight']=300 mpl.rcParams['font.size']=14 yvalues = [node.yvalue for node in tree.find_clades()] y_span = max(yvalues) y_unit = y_span / float(len(yvalues)) # Setup colors. trait_name = color_by_trait traits = [k.attr[trait_name] for k in tree.find_clades()] norm = mpl.colors.Normalize(min(traits), max(traits)) cmap = mpl.cm.viridis # # Setup the figure grid. # fig = plt.figure(figsize=(8, 6), facecolor='w') gs = gridspec.GridSpec(2, 1, height_ratios=[14, 1], width_ratios=[1], hspace=0.1, wspace=0.1) ax = fig.add_subplot(gs[0]) colorbar_ax = fig.add_subplot(gs[1]) L=len([k for k in tree.find_clades() if k.is_terminal()]) # Setup arrays for tip and internal node coordinates. tip_circles_x = [] tip_circles_y = [] tip_circles_color = [] tip_circle_sizes = [] node_circles_x = [] node_circles_y = [] node_circles_color = [] node_line_widths = [] node_line_segments = [] node_line_colors = [] branch_line_segments = [] branch_line_widths = [] branch_line_colors = [] branch_line_labels = [] for k in tree.find_clades(): ## iterate over objects in tree x=k.attr["num_date"] ## or from x position determined earlier y=k.yvalue ## get y position from .drawTree that was run earlier, but could be anything else if k.up is None: xp = None else: xp=k.up.attr["num_date"] ## get x position of current object's parent if x==None: ## matplotlib won't plot Nones, like root x=0.0 if xp==None: xp=x c = 'k' if k.attr.has_key(trait_name): c = cmap(norm(k.attr[trait_name])) branchWidth=2 if k.is_terminal(): ## if leaf... s = tip_size ## tip size can be fixed tip_circle_sizes.append(s) tip_circles_x.append(x) tip_circles_y.append(y) tip_circles_color.append(c) else: ## if node... k_leaves = [child for child in k.find_clades() if child.is_terminal()] # Scale branch widths by the number of tips. branchWidth += initial_branch_width * len(k_leaves) / float(L) if len(k.clades)==1: node_circles_x.append(x) node_circles_y.append(y) node_circles_color.append(c) ax.plot([x,x],[k.clades[-1].yvalue, k.clades[0].yvalue], lw=branchWidth, color=c, ls='-', zorder=9, solid_capstyle='round') branch_line_segments.append([(xp, y), (x, y)]) branch_line_widths.append(branchWidth) branch_line_colors.append(c) branch_lc = LineCollection(branch_line_segments, zorder=9) branch_lc.set_color(branch_line_colors) branch_lc.set_linewidth(branch_line_widths) branch_lc.set_label(branch_line_labels) branch_lc.set_linestyle("-") ax.add_collection(branch_lc) # Add circles for tips and internal nodes. tip_circle_sizes = np.array(tip_circle_sizes) ax.scatter(tip_circles_x, tip_circles_y, s=tip_circle_sizes, facecolor=tip_circles_color, edgecolor='none',zorder=11) ## plot circle for every tip ax.scatter(tip_circles_x, tip_circles_y, s=tip_circle_sizes*2, facecolor='k', edgecolor='none', zorder=10) ## plot black circle underneath ax.scatter(node_circles_x, node_circles_y, facecolor=node_circles_color, s=50, edgecolor='none', zorder=10, lw=2, marker='|') ## mark every node in the tree to highlight that it's a multitype tree #ax.set_ylim(-10, y_span - 300) ax.spines['top'].set_visible(False) ## no axes ax.spines['right'].set_visible(False) ax.spines['left'].set_visible(False) ax.grid(axis='x',ls='-',color='grey') ax.tick_params(axis='y',size=0) ax.set_yticklabels([]) cb1 = mpl.colorbar.ColorbarBase( colorbar_ax, cmap=cmap, norm=norm, orientation='horizontal' ) cb1.set_label(color_by_trait) gs.tight_layout(fig) plt.savefig(figure_name) if __name__ == "__main__": parser = argparse.ArgumentParser() parser.add_argument("tree", help="auspice tree JSON") parser.add_argument("output", help="plotted tree figure") parser.add_argument("--colorby", help="trait in tree to color by", default="num_date") parser.add_argument("--branch_width", help="initial branch width", type=int, default=10) parser.add_argument("--tip_size", help="tip size", type=int, default=10) args = parser.parse_args() with open(args.tree, "r") as json_fh: json_tree = json.load(json_fh) # Convert JSON tree layout to a Biopython Clade instance. tree = json_to_tree(json_tree) # Plot the tree. plot_tree( tree, args.output, args.colorby, args.branch_width, args.tip_size ) augur-24.2.2/scripts/prepared_json_to_fasta.py000066400000000000000000000025461456376326500215300ustar00rootroot00000000000000""" Convert a prepared JSON file from augur into a FASTA file. """ import argparse import Bio import json import logging import pandas as pd import sys sys.path.append('..') from base.sequences_process import sequence_set if __name__ == "__main__": parser = argparse.ArgumentParser(description="Convert a prepared JSON file from augur into a FASTA file.") parser.add_argument("json", help="prepared JSON from augur") parser.add_argument("--metadata", help="tab-delimited file to dump prepared JSON metadata to") args = parser.parse_args() # Setup the logger. logger = logging.getLogger(__name__) # Load the JSON data. with open(args.json, "r") as fh: data = json.load(fh) # Prepare a sequence set. sequences = sequence_set( logger, data["sequences"], data["reference"], data["info"]["date_format"] ) # Write sequences to standard out. output_sequences = sequences.seqs.values() Bio.SeqIO.write(output_sequences, sys.stdout, "fasta") # Prepare metadata if it has been requested. if args.metadata: metadata = [sequences.seqs[seq].attributes for seq in sequences.seqs] metadata_df = pd.DataFrame(metadata) metadata_df = metadata_df.rename(columns={"num_date": "prepared_num_date"}) metadata_df.to_csv(args.metadata, sep="\t", index=False) augur-24.2.2/scripts/s3.py000066400000000000000000000267661456376326500153540ustar00rootroot00000000000000""" Script to sync files between local disk and S3 buckets. # From augur/ directory # Download flu H3N2 data into auspice directory. python scripts/s3.py pull -b nextstrain-staging \ --to builds/flu/auspice --prefixes flu_h3n2 # Upload flu H3N2 data to S3 dev bucket. python scripts/s3.py push -b nextstrain-staging \ -g "builds/flu/auspice/flu_h3n2_*" # Sync H3N2 data from one bucket to another and create CloudFront invalidation. python ../../scripts/s3.py sync --from nextstrain-staging \ --to production-data --prefixes flu_h3n2 """ import argparse, boto3, botocore, glob, gzip, io, logging, os, shutil, time # Map S3 buckets to their corresponding CloudFront ids. CLOUDFRONT_ID_BY_BUCKET = { "nextstrain-staging": "E3L83FTHWUN0BV", "nextstrain-data": "E3LB0EWZKCCV" } def get_bucket_keys_by_prefixes(bucket, prefixes): """Get objects from the given bucket instance that match the given list of prefixes. If no prefixes are given, get all objects. Args: bucket: S3 Bucket instance prefixes: NoneType or list of key prefixes to filter objects in the bucket by Returns: list: sorted list of object keys matching the given prefixes """ if prefixes is not None: object_keys = [] for prefix in prefixes: keys = [obj.key for obj in bucket.objects.filter(Prefix=prefix)] object_keys.extend(keys) object_keys = sorted(set(object_keys)) else: object_keys = sorted([obj.key for obj in bucket.objects.all()]) return object_keys def create_cloudfront_invalidation(bucket_name, path): """Create a cache invalidation for the given files if a CloudFront id is given. Args: bucket_name: an S3 bucket name that may or may not have a CloudFront id path: invalidation path, may contain * Returns: dict or NoneType: CloudFront API response or None if no CloudFront is defined for the given bucket """ # Setup logging. logger = logging.getLogger(__name__) # Find CloudFront id for the given bucket name. cloudfront_id = CLOUDFRONT_ID_BY_BUCKET.get(bucket_name) if cloudfront_id is None: logger.warning("Could not find a CloudFront id for the S3 bucket '%s'" % bucket_name) return print("Creating invalidation for '%s' in the CloudFront distribution '%s'" % (path, cloudfront_id)) # Connect to CloudFront. cloudfront = boto3.client("cloudfront") # Create the invalidation. Top-level keys require a "/" prefix for # proper invalidation. This is purposely a single path invalidation # due to how AWS charges, see here: # https://docs.aws.amazon.com/AmazonCloudFront/latest/DeveloperGuide/Invalidation.html invalidation_batch = { "Paths": { "Quantity": 1, "Items": ["/%s" % path] }, "CallerReference": str(time.time()) } logger.debug("Invalidation batch: %s" % str(invalidation_batch)) # Create the invalidation. response = cloudfront.create_invalidation( DistributionId=cloudfront_id, InvalidationBatch=invalidation_batch ) logger.debug("CloudFront response: %s" % str(response)) return response def push(bucket_name, file_glob, dryrun=False): """Push the given files to the given S3 bucket and optionally invalidate the cache for a given CloudFront id. Args: bucket_name: S3 bucket to pull from glob: string to identify local files to push, of the from builds/zika/auspice/zika_* dryrun: boolean indicating whether files should be downloaded or not """ # Setup logging. logger = logging.getLogger(__name__) # Construct file list from glob files = glob.glob(file_glob) # Create a distinct list of files to push. files = list(set(files)) # Confirm that all given file paths are proper files. for file_name in files: assert os.path.isfile(file_name), "The requested input '%s' is not a proper file" % file_name # Connect to S3. s3 = boto3.resource("s3") bucket = s3.Bucket(bucket_name) # Upload local files, stripping directory names from the given file paths # for the S3 keys. print("Uploading %i files to bucket '%s'" % (len(files), bucket_name)) s3_keys = [] for file_name in files: s3_key = os.path.split(file_name)[-1] s3_keys.append(s3_key) logger.info("Uploading '%s' as '%s'" % (file_name, s3_key)) if not dryrun: # Open uncompressed file to be uploaded. with open(file_name, "rb") as fh: # Compress the file in memory. compressed_fh = io.BytesIO() with gzip.GzipFile(fileobj=compressed_fh, mode="wb") as gz: shutil.copyfileobj(fh, gz) compressed_fh.seek(0) # Upload the compressed file with associated metadata. bucket.upload_fileobj( compressed_fh, s3_key, {"ContentEncoding": "gzip", "ContentType": "application/json"} ) # Create a CloudFront invalidation for the destination bucket if not dryrun: invalidation_path = os.path.split(file_glob)[-1] response = create_cloudfront_invalidation(bucket_name, invalidation_path) def pull(bucket_name, prefixes=None, local_dir=None, dryrun=False): """Pull files from the given S3 bucket. Optionally, only pull files that match the given list of filename prefixes. Args: bucket_name: S3 bucket to pull from prefixes: a list of key prefixes to filter objects in the bucket by local_dir: a local directory to download files into dryrun: boolean indicating whether files should be downloaded or not """ # Setup logging. logger = logging.getLogger(__name__) # Confirm that the given local directory is a real directory. if local_dir is not None: assert os.path.isdir(local_dir), "The requested output directory '%s' is not a proper directory." % local_dir # Connect to S3. s3 = boto3.resource("s3") # Get a list of all objects in the requested bucket. bucket = s3.Bucket(bucket_name) # Get keys by prefixes. object_keys = get_bucket_keys_by_prefixes(bucket, prefixes) # Download objects. print("Downloading %i files from bucket '%s'" % (len(object_keys), bucket_name)) for key in object_keys: if not key.endswith("json"): logger.warning("Skipping unsupported file type for file '%s'" % key) continue # Download into a local directory if requested. if local_dir is not None: local_key = os.path.join(local_dir, key) else: local_key = key logger.info("Downloading '%s' as '%s'" % (key, local_key)) if not dryrun: with open(local_key, "wb") as fh: # Download the compressed file into memory. compressed_fh = io.BytesIO() bucket.download_fileobj(key, compressed_fh) compressed_fh.seek(0) # Write the uncompressed data from the file to disk. try: with gzip.GzipFile(fileobj=compressed_fh, mode="rb") as gz: shutil.copyfileobj(gz, fh) except IOError: logger.warning("File %s does not appear to be compressed, trying to pull as an uncompressed file" % key) shutil.copyfileobj(compressed_fh, fh) def sync(source_bucket_name, destination_bucket_name, prefixes=None, dryrun=False): """Sync files from a given source bucket to a given destination bucket. An optional list of prefixes will restrict the files being synced between buckets. Args: source_bucket_name: name of bucket to copy files from destination_bucket_name: name of bucket to copy files to prefixes: a list of key prefixes to filter objects in the bucket by dryrun: boolean indicating whether files should be downloaded or not """ # Setup logging. logger = logging.getLogger(__name__) # Connect to S3. s3 = boto3.resource("s3") # Get source bucket. source_bucket = s3.Bucket(source_bucket_name) # Get source bucket keys by prefixes. object_keys = get_bucket_keys_by_prefixes(source_bucket, prefixes) if len(object_keys) == 0: raise Exception("No files in the source bucket '%s' matched the given prefixes: %s" % (source_bucket_name, str(prefixes))) print("Syncing %i files from '%s' to '%s'" % (len(object_keys), source_bucket_name, destination_bucket_name)) # Copy objects from source to destination by key. for key in object_keys: logger.info("Copying '%s'" % key) if not dryrun: copy_source = { 'Bucket': source_bucket_name, 'Key': key } s3.meta.client.copy(copy_source, destination_bucket_name, key) # Create a CloudFront invalidation for the destination bucket. if not dryrun: response = create_cloudfront_invalidation(destination_bucket_name, object_keys) if __name__ == "__main__": parser = argparse.ArgumentParser( description="Upload files to a (nextstrain) S3 bucket and perform cloudfront invalidation", epilog="P.S. run \"s3.py -h\" to see the help specific to that command" ) parser.add_argument("--verbose", "-v", action="store_const", dest="loglevel", const=logging.INFO, help="Enable verbose logging") parser.add_argument("--debug", "-d", action="store_const", dest="loglevel", const=logging.DEBUG, help="Enable debugging logging") parser.add_argument("--dryrun", "-n", action="store_true", help="Perform a dryrun without uploading or downloading any files") subparsers = parser.add_subparsers(dest="command_name") parser_push = subparsers.add_parser("push") parser_push.add_argument("--bucket", "-b", type=str, help="S3 bucket to push files to") parser_push.add_argument("--glob", "-g", type=str, help="Glob string to identify set of local files, must have quotes") parser_push.set_defaults(func=push) parser_pull = subparsers.add_parser("pull") parser_pull.add_argument("--bucket", "-b", type=str, help="S3 bucket to pull files from") parser_pull.add_argument("--prefixes", "-p", nargs="+", help="One or more file prefixes to match in the given bucket") parser_pull.add_argument("--local_dir", "--to", "-t", help="Local directory to download files into") parser_pull.set_defaults(func=pull) parser_sync = subparsers.add_parser("sync") parser_sync.add_argument("--source_bucket", "--from", type=str, help="Source S3 bucket") parser_sync.add_argument("--destination_bucket", "--to", type=str, help="Destination S3 bucket") parser_sync.add_argument("--prefixes", "-p", nargs="+", help="One or more prefixes for files to sync between buckets") parser_sync.set_defaults(func=sync) args = parser.parse_args() logging.basicConfig(level=args.loglevel) try: if args.command_name == "push": args.func(args.bucket, args.glob, args.dryrun) elif args.command_name == "pull": args.func(args.bucket, args.prefixes, args.local_dir, args.dryrun) elif args.command_name == "sync": args.func(args.source_bucket, args.destination_bucket, args.prefixes, args.dryrun) except botocore.exceptions.NoCredentialsError as e: parser.error("Unable to locate AWS credentials. Set environment variables for AWS_SECRET_ACCESS_KEY and AWS_ACCESS_KEY_ID.") except Exception as e: parser.error(e.message) augur-24.2.2/scripts/swap_colors.py000066400000000000000000000177171456376326500173560ustar00rootroot00000000000000import json from re import split import argparse from glob import glob parser = argparse.ArgumentParser(description ="Update color ramps in processed meta.JSON files") parser.add_argument('--jsons', '--json', default=None, nargs='+', type=str, help="Path to prepared JSON(s) to edit. If none, will update all files like ./*meta.json") parser.add_argument('--custom_colors', default=None, type=str, help="Path to .tsv or .csv with custom color ramps; will fall back to nextstrain default colors if not provided.") args = parser.parse_args().__dict__ if args['jsons'] == None: try: jsons = glob('./*meta.json') assert len(jsons) > 0 except: raise IOError('ERROR: either provide path(s) to meta.json file(s) or run this script from directory with meta.json files.') else: jsons = args['jsons'] if args['custom_colors']: custom_colors = args['custom_colors'] # file path custom_colors = [l.strip() for l in open(custom_colors, 'r').readlines()] # [categorycolor1, categorycolor2,...] custom_colors = [split('[\s,\\t]', c, maxsplit=1) for c in custom_colors] # [ [category, color], ...] custom_colors = { l[0] : l[1] for l in custom_colors} # { category: color } else: custom_colors = None default_colors = [ [], ["#4C90C0"], ["#4C90C0", "#CBB742"], ["#4988C5", "#7EB876", "#CBB742"], ["#4580CA", "#6BB28D", "#AABD52", "#DFA43B"], ["#4377CD", "#61AB9D", "#94BD61", "#CDB642", "#E68133"], ["#416DCE", "#59A3AA", "#84BA6F", "#BBBC49", "#E29D39", "#E1502A"], ["#3F63CF", "#529AB6", "#75B681", "#A6BE55", "#D4B13F", "#E68133", "#DC2F24"], ["#3E58CF", "#4B8EC1", "#65AE96", "#8CBB69", "#B8BC4A", "#DCAB3C", "#E67932", "#DC2F24"], ["#3F4DCB", "#4681C9", "#5AA4A8", "#78B67E", "#9EBE5A", "#C5B945", "#E0A23A", "#E67231", "#DC2F24"], ["#4042C7", "#4274CE", "#5199B7", "#69B091", "#88BB6C", "#ADBD51", "#CEB541", "#E39B39", "#E56C2F", "#DC2F24"], ["#4137C2", "#4066CF", "#4B8DC2", "#5DA8A3", "#77B67F", "#96BD60", "#B8BC4B", "#D4B13F", "#E59638", "#E4672F", "#DC2F24"], ["#462EB9", "#3E58CF", "#4580CA", "#549DB2", "#69B091", "#83BA70", "#A2BE57", "#C1BA47", "#D9AD3D", "#E69136", "#E4632E", "#DC2F24"], ["#4B26B1", "#3F4ACA", "#4272CE", "#4D92BF", "#5DA8A3", "#74B583", "#8EBC66", "#ACBD51", "#C8B944", "#DDA93C", "#E68B35", "#E3602D", "#DC2F24"], ["#511EA8", "#403DC5", "#4063CF", "#4785C7", "#559EB1", "#67AF94", "#7EB877", "#98BD5E", "#B4BD4C", "#CDB642", "#DFA53B", "#E68735", "#E35D2D", "#DC2F24"], ["#511EA8", "#403AC4", "#3F5ED0", "#457FCB", "#5098B9", "#60AA9F", "#73B583", "#8BBB6A", "#A4BE56", "#BDBB48", "#D3B240", "#E19F3A", "#E68234", "#E25A2C", "#DC2F24"], ["#511EA8", "#4138C3", "#3E59CF", "#4379CD", "#4D92BE", "#5AA5A8", "#6BB18E", "#7FB975", "#96BD5F", "#AFBD4F", "#C5B945", "#D8AE3E", "#E39B39", "#E67D33", "#E2572B", "#DC2F24"], ["#511EA8", "#4236C1", "#3F55CE", "#4273CE", "#4A8CC2", "#569FAF", "#64AD98", "#76B680", "#8BBB6A", "#A1BE58", "#B7BC4B", "#CCB742", "#DCAB3C", "#E59638", "#E67932", "#E1552B", "#DC2F24"], ["#511EA8", "#4335BF", "#3F51CC", "#416ECE", "#4887C6", "#529BB6", "#5FA9A0", "#6EB389", "#81B973", "#95BD61", "#AABD52", "#BFBB48", "#D1B340", "#DEA63B", "#E69237", "#E67531", "#E1522A", "#DC2F24"], ["#511EA8", "#4333BE", "#3F4ECB", "#4169CF", "#4682C9", "#4F96BB", "#5AA5A8", "#68AF92", "#78B77D", "#8BBB6A", "#9EBE59", "#B3BD4D", "#C5B945", "#D5B03F", "#E0A23A", "#E68D36", "#E67231", "#E1502A", "#DC2F24"], ["#511EA8", "#4432BD", "#3F4BCA", "#4065CF", "#447ECC", "#4C91BF", "#56A0AE", "#63AC9A", "#71B486", "#81BA72", "#94BD62", "#A7BE54", "#BABC4A", "#CBB742", "#D9AE3E", "#E29E39", "#E68935", "#E56E30", "#E14F2A", "#DC2F24"], ["#511EA8", "#4531BC", "#3F48C9", "#3F61D0", "#4379CD", "#4A8CC2", "#539CB4", "#5EA9A2", "#6BB18E", "#7AB77B", "#8BBB6A", "#9CBE5B", "#AFBD4F", "#C0BA47", "#CFB541", "#DCAB3C", "#E39B39", "#E68534", "#E56B2F", "#E04D29", "#DC2F24"], ["#511EA8", "#4530BB", "#3F46C8", "#3F5ED0", "#4375CD", "#4988C5", "#5098B9", "#5AA5A8", "#66AE95", "#73B583", "#82BA71", "#93BC62", "#A4BE56", "#B5BD4C", "#C5B945", "#D3B240", "#DEA73B", "#E59738", "#E68234", "#E4682F", "#E04C29", "#DC2F24"], ["#511EA8", "#462FBA", "#3F44C8", "#3E5BD0", "#4270CE", "#4784C8", "#4E95BD", "#57A1AD", "#61AB9C", "#6DB38A", "#7BB879", "#8BBB6A", "#9BBE5C", "#ABBD51", "#BBBC49", "#CBB843", "#D6AF3E", "#DFA43B", "#E69537", "#E67F33", "#E4662E", "#E04A29", "#DC2F24"], ["#511EA8", "#462EB9", "#4042C7", "#3E58CF", "#416DCE", "#4580CA", "#4C90C0", "#549DB2", "#5DA8A3", "#69B091", "#75B681", "#83BA70", "#92BC63", "#A2BE57", "#B2BD4D", "#C1BA47", "#CEB541", "#D9AD3D", "#E1A03A", "#E69136", "#E67C32", "#E4632E", "#E04929", "#DC2F24"], ["#511EA8", "#462EB9", "#4040C6", "#3F55CE", "#4169CF", "#447DCC", "#4A8CC2", "#529AB7", "#5AA5A8", "#64AD98", "#70B487", "#7DB878", "#8BBB6A", "#99BD5D", "#A9BD53", "#B7BC4B", "#C5B945", "#D1B340", "#DCAB3C", "#E29D39", "#E68D36", "#E67932", "#E3612D", "#E04828", "#DC2F24"], ["#511EA8", "#472DB8", "#403EC6", "#3F53CD", "#4066CF", "#4379CD", "#4989C5", "#4F97BB", "#57A1AD", "#61AA9E", "#6BB18E", "#77B67F", "#84BA70", "#92BC64", "#A0BE58", "#AFBD4F", "#BCBB49", "#CAB843", "#D4B13F", "#DEA83C", "#E39B39", "#E68A35", "#E67732", "#E35F2D", "#DF4728", "#DC2F24"], ["#511EA8", "#472CB7", "#403DC5", "#3F50CC", "#4063CF", "#4375CD", "#4785C7", "#4D93BE", "#559EB1", "#5DA8A3", "#67AF94", "#72B485", "#7EB877", "#8BBB6A", "#98BD5E", "#A6BE55", "#B4BD4C", "#C1BA47", "#CDB642", "#D7AF3E", "#DFA53B", "#E49838", "#E68735", "#E67431", "#E35D2D", "#DF4628", "#DC2F24"], ["#511EA8", "#482CB7", "#403BC5", "#3F4ECB", "#3F61D0", "#4272CE", "#4682C9", "#4C90C0", "#529BB5", "#5AA5A8", "#63AC9A", "#6DB28B", "#78B77D", "#84BA6F", "#91BC64", "#9EBE59", "#ACBD51", "#B9BC4A", "#C5B945", "#D0B441", "#DAAD3D", "#E0A23A", "#E59637", "#E68434", "#E67231", "#E35C2C", "#DF4528", "#DC2F24"], ["#511EA8", "#482BB6", "#403AC4", "#3F4CCB", "#3F5ED0", "#426FCE", "#457FCB", "#4A8CC2", "#5098B9", "#58A2AC", "#60AA9F", "#69B091", "#73B583", "#7FB976", "#8BBB6A", "#97BD5F", "#A4BE56", "#B1BD4E", "#BDBB48", "#C9B843", "#D3B240", "#DCAB3C", "#E19F3A", "#E69337", "#E68234", "#E67030", "#E25A2C", "#DF4428", "#DC2F24"], ["#511EA8", "#482BB6", "#4039C3", "#3F4ACA", "#3E5CD0", "#416CCE", "#447CCD", "#4989C4", "#4E96BC", "#559FB0", "#5DA8A4", "#66AE96", "#6FB388", "#7AB77C", "#85BA6F", "#91BC64", "#9DBE5A", "#AABD53", "#B6BD4B", "#C2BA46", "#CDB642", "#D6B03F", "#DDA83C", "#E29D39", "#E69036", "#E67F33", "#E56D30", "#E2592C", "#DF4428", "#DC2F24"] ] def swap_colors(json_file_path): ''' Switches out color ramp in meta.json files. Uses custom color ramp if provided and valid; otherwise falls back to nextstrain default colors. N.B.: Modifies json in place and writes to original file path. ''' j = json.load(open(json_file_path, 'r')) color_options = j['color_options'] for k,v in color_options.items(): if 'color_map' in v: categories, colors = zip(*v['color_map']) ## Use custom colors if provided AND present for all categories in the dataset if custom_colors and all([category in custom_colors for category in categories]): colors = [ custom_colors[category] for category in categories ] ## Expand the color palette if we have too many categories elif len(categories) > len(default_colors): from matplotlib.colors import LinearSegmentedColormap, to_hex from numpy import linspace expanded_cmap = LinearSegmentedColormap.from_list('expanded_cmap', default_colors[-1], N=len(categories)) discrete_colors = [expanded_cmap(i) for i in linspace(0,1,len(categories))] colors = [to_hex(c).upper() for c in discrete_colors] else: ## Falls back to default nextstrain colors colors = default_colors[len(categories)] # based on how many categories are present; keeps original ordering j['color_options'][k]['color_map'] = map(list, zip(categories, colors)) json.dump(j, open(json_file_path, 'w'), indent=1) for j in jsons: swap_colors(j) augur-24.2.2/scripts/traits_from_json.py000066400000000000000000000026661456376326500204020ustar00rootroot00000000000000from __future__ import print_function import sys sys.path.append('..') # this is an assumption and is probably wrong from base.utils import parse_date import argparse import json from numpy import ndarray def get_trait(attributes, trait, dateFormat): if trait in ["num_date", "date"]: try: date = parse_date(attributes["raw_date"], dateFormat)[1] except KeyError: return "unknown" if isinstance(date, (list, tuple, ndarray)): return (date[0] + date[1]) / 2 return date else: try: return attributes[trait] except KeyError: return "unknown" if __name__=="__main__": parser = argparse.ArgumentParser(description = "Process a given JSONs") parser.add_argument('--json', required=True, type=str, help="prepared JSON") parser.add_argument('--trait', required=True, type=str, help="prepared JSON") parser.add_argument('--header', nargs='*', type=str, help="header fields") parser.add_argument('--date_format', nargs='*', default=["%Y-%m-%d"], type=str, help="if needed. default: [%%Y-%%m-%%d]") params = parser.parse_args() with open(params.json, 'r') as fh: data = json.load(fh) try: print("\t".join(params.header)) except KeyError: pass for seq, val in data["sequences"].items(): print("{}\t{}".format(seq, get_trait(val["attributes"], params.trait, params.date_format))) augur-24.2.2/scripts/tree_to_JSON.py000066400000000000000000000326501456376326500173060ustar00rootroot00000000000000from __future__ import division, print_function from Bio import Phylo from StringIO import StringIO import numpy as np import sys, csv, logging, json, argparse, imp, math from collections import defaultdict sys.path.append('') from base.colorLogging import ColorizingStreamHandler version = 0.1 def get_command_line_args(): parser = argparse.ArgumentParser(description ="Convert tree files to Auspice ready JSONs. Version {}".format(version)) newick = parser.add_argument_group('newick') newick.add_argument('--newick', type=str, help="Path to newick file") beast = parser.add_argument_group('beast') beast.add_argument('--nexus', type=str, help="Path to nexus file") beast.add_argument('--most_recent_tip', type=float, help="Date of the most recent tip (in decimal format)") beast.add_argument('--discrete_traits', type=str, nargs='+', default=[], help="Discrete traits to extract from the BEAST annotations") beast.add_argument('--continuous_traits', type=str, nargs='+', default=[], help="Continuous traits to extract from the BEAST annotations") beast.add_argument('--make_traits_log', type=str, nargs='+', default=[], help="Convert these (continous) traits to log space: y=-ln(x)") beast.add_argument("--fake_divergence", action="store_true", help="Set the divergence as time (prevents auspice crashing)") metadata = parser.add_argument_group('metadata') metadata.add_argument('--strain_csv', default=None, type=str, help="Metadata (with headers) linking strain to some metadata columns") general = parser.add_argument_group('general') general.add_argument("--maintainer", type=str, nargs=2, default=["", ""], help="Maintaner (display name, link name). Shown in auspice footer.") general.add_argument("--debug", action="store_const", dest="loglevel", const=logging.DEBUG, help="Enable debugging logging") general.add_argument('--output_prefix', '-o', required=True, type=str, help="Output prefix (i.e. \"_meta.json\" will be appended to this)") general.add_argument('--title', default=None, type=str, help="Title (to be displayed by auspice)") general.add_argument("--defaults", type=str, nargs='+', default=[], help="Auspice defaults. Format: \"key:value\"") general.add_argument("--filters", type=str, nargs='+', default=[], help="Auspice filters.") general.add_argument('--geo', type=str, help="CSV File w. header \"trait,value,latitude,longitude\". Turns on the map panel.") return parser.parse_args() # Biopython's trees don't store links to node parents, so we need to build # a map of each node to its parent. # Code from the Bio.Phylo cookbook: http://biopython.org/wiki/Phylo_cookbook def all_parents(tree): parents = {} for clade in tree.find_clades(order='level'): for child in clade: parents[child] = clade return parents def annotate_phylotree_parents(tree): # Get all parent nodes by node. parents_by_node = all_parents(tree) # Next, annotate each node with its parent. for node in tree.find_clades(): if node == tree.root: node.parent = None else: node.parent = parents_by_node[node] # Return the tree. return tree def modified_tree_to_json(node, extra_attr = []): tree_json = {} str_attr = ['strain','attr'] num_attr = ['yvalue', 'tvalue', 'num_date', 'clade'] if hasattr(node, 'name'): tree_json['strain'] = node.name for prop in str_attr: if hasattr(node, prop): tree_json[prop] = node.__getattribute__(prop) for prop in num_attr: if hasattr(node, prop): try: tree_json[prop] = round(node.__getattribute__(prop),5) except: print("cannot round:", node.__getattribute__(prop), "assigned as is") tree_json[prop] = node.__getattribute__(prop) for prop in extra_attr: if len(prop)==2 and callable(prop[1]): if hasattr(node, prop[0]): tree_json[prop] = prop[1](node.__getattribute__(prop[0])) else: if hasattr(node, prop): tree_json[prop] = node.__getattribute__(prop) if node.clades: tree_json["children"] = [] for ch in node.clades: tree_json["children"].append(modified_tree_to_json(ch, extra_attr)) return tree_json def mock_meta_json(tree, args): meta = {} meta["updated"] = "today" meta["virus_count"] = tree.virus_count meta["maintainer"] = args.maintainer if not args.title: meta["title"] = args.newick else: meta["title"] = args.title meta["color_options"] = { # "country": { # "menuItem": "country", # "type": "discrete", # "legendTitle": "country", # "key": "country" # }, "num_date": { "menuItem": "date", "type": "continuous", "legendTitle": "Sampling date", "key": "num_date" }, } meta["filters"] = [] for filter in args.filters: meta["filters"].append(filter) meta["commit"] = "unknown" meta["panels"] = ["tree"] meta["geo"] = {"country": {}} meta["annotations"] = {} meta["author_info"] = {} if args.defaults: meta["defaults"] = {} for default in args.defaults: kv = default.split(":") meta["defaults"][kv[0]] = kv[1] return meta; def set_basic_information_on_nodes(tree): count = 0; for node in tree.find_clades(): count += 1 if not node.name: node.name = "CLADE_{}".format(count) setattr(node,'attr', {}) setattr(node,'clade', count) setattr(node,'strain', node.name) def set_y_values(tree): count = 0; for node in tree.find_clades(): if node.is_terminal(): setattr(node, 'yvalue', count) count += 1 # set internal y-values for node in tree.get_nonterminals(order="postorder"): setattr(node, 'yvalue', np.mean([x.yvalue for x in node.clades])) tree.virus_count = count def set_divergence_on_tree(tree): for node in tree.find_clades(): if node.name == "root": node.branch_length = 0.0 # root node node.cumulative_length = 0.0 else: node.cumulative_length = node.parent.cumulative_length + node.branch_length node.attr["div"] = node.cumulative_length def make_up_temporal_data(tree): fake_date_range = [2000, 2018] max_divergence = 0; for node in tree.find_clades(): if node.attr["div"] > max_divergence: max_divergence = node.attr["div"] for node in tree.find_clades(): node.attr["num_date"] = fake_date_range[0] + (node.attr["div"] / max_divergence) * (fake_date_range[1] - fake_date_range[0]) def make_up_country(tree): countries = ["USA", "New Zealand", "France", "Kenya"] for node in tree.find_clades(): if node.is_terminal(): node.attr["country"] = np.random.choice(countries) def calc_entropy(vals): if len(vals) == 1: return 0.0 return sum([v * math.log(v+1E-20) for v in vals]) * -1 / math.log(len(vals)) def removeBOM(arr): return [field.replace('\xef\xbb\xbf', '') for field in arr] # excel BOM \U+FEFF if __name__=="__main__": args = get_command_line_args() root_logger = logging.getLogger('') root_logger.setLevel(args.loglevel if args.loglevel else logging.INFO) root_logger.addHandler(ColorizingStreamHandler()) logger = logging.getLogger(__name__) ## PARSE THE TREE ## if args.newick: logger.info("Loading newick tree {}".format(args.newick)) tree = Phylo.read(args.newick, "newick"); tree.ladderize() tree = annotate_phylotree_parents(tree) set_basic_information_on_nodes(tree) set_y_values(tree) set_divergence_on_tree(tree) make_up_temporal_data(tree) make_up_country(tree) elif args.nexus: try: bt = imp.load_source('baltic', '/Users/james/blab/baltic/baltic.py') except IOError: bt = imp.load_source('baltic', '/Users/evogytis/Documents/BLAB_baltic/baltic.py') logger.info("Loading nexus tree {}".format(args.nexus)) bt_tree = bt.loadNexus(args.nexus, absoluteTime=False) ## loads a BEAST nexus file bt_tree.setAbsoluteTime(args.most_recent_tip) tree = Phylo.read(StringIO(bt_tree.toString()), 'newick') tree = annotate_phylotree_parents(tree) nodes=tree.get_nonterminals(order='preorder') ## fetch nodes from newick tree bt_nodes=[k for k in bt_tree.traverse_tree(include_all=True) if k.branchType=='node'] ## fetch nodes from baltic tree leaves=tree.get_terminals(order='preorder') ## fetch leaves from newick tree bt_leaves=[k for k in bt_tree.traverse_tree()] ## fetch leaves from baltic tree tree.virus_count = len(leaves) # iterate over BT (nexus/BEAST) nodes & leaves as we iterate over the biophylo tree # and transfer relevent data for pairs in [[nodes,bt_nodes],[leaves,bt_leaves]]: for node, b in zip(*pairs): setattr(node,'tvalue',b.height) ## height in years setattr(node,'xvalue',b.height) ## 0.0 in the future? setattr(node,'yvalue',b.y) ## y value after drawing setattr(node,'clade',b.index) ## clade attrs={} if b.absoluteTime!=None: attrs['num_date']=b.absoluteTime else: # root attrs['num_date']=bt_tree.Objects[0].absoluteTime if b.traits.has_key('height_95%_HPD'): attrs['num_date_confidence']=[args.most_recent_tip-t for t in b.traits['height_95%_HPD']] if args.fake_divergence: attrs['div'] = attrs['num_date'] setattr(node,'attr',attrs) for trait in args.discrete_traits: if b.traits.has_key(trait): attrs[trait] = b.traits[trait] tset = trait+".set" tprob = trait+".set.prob" if b.traits.has_key(tset) and b.traits.has_key(tprob): attrs[trait+'_confidence']={t:p for t,p in zip(b.traits[tset], b.traits[tprob])} attrs[trait+'_entropy'] = calc_entropy(b.traits[tprob]) for trait in args.continuous_traits: make_log = trait in args.make_traits_log rate = trait+".rate" hpd = trait+".rate_95%_HPD" if b.traits.has_key(rate): attrs[trait] = np.log(b.traits[rate]) if make_log else b.traits[rate] if b.traits.has_key(hpd): attrs[trait+'_confidence'] = [np.log(x) for x in b.traits[hpd]] if make_log else b.traits[hpd] attrs[trait+'_entropy'] = calc_entropy(b.traits[hpd]) # import pdb; pdb.set_trace() meta_json = mock_meta_json(tree, args) if args.strain_csv: meta = {} with open(args.strain_csv, 'rb') as fh: csvdata = csv.reader(fh, delimiter=',', quotechar='"') header = removeBOM(csvdata.next()) assert(header[0] == "strain") for line in csvdata: meta[line[0]] = {k:v for k,v in zip(header, line) if k != "strain"} for node in tree.find_clades(): if node.name in meta: if not hasattr(node, "attr"): # confusing! setattr(node, "attr", {}) for key, value in meta[node.name].items(): if value == "": continue node.attr[key] = value for trait in header[1:]: meta_json["color_options"][trait] = {"menuItem": trait, "type": "discrete", "legendTitle": trait, "key": trait} if args.geo: geo = defaultdict(lambda: defaultdict(dict)) with open(args.geo, 'rb') as fh: csvdata = csv.reader(fh, delimiter=',', quotechar='"') header = removeBOM(csvdata.next()) assert(len(header) == 4) for line in csvdata: # trait,value,latitude,longitude geo[line[0]][line[1]] = {"latitude": line[2], "longitude": line[3]} meta_json["geo"] = geo if "map" not in meta_json["panels"]: meta_json["panels"].append("map") # some basic checks geo_traits = geo.keys() for node in tree.find_clades(): if hasattr(node, "attr"): for trait in geo_traits: if trait in node.attr: if node.attr[trait] not in geo[trait]: logger.warn("{} has no GPS co-ords".format(node.attr[trait])) tree_json = modified_tree_to_json(tree.root) if args.nexus: tree_json = tree_json["children"][0] # hacky ## add the discrete & continuous traits as colorBys for trait in args.discrete_traits: meta_json["color_options"][trait] = {"menuItem": trait, "type": "discrete", "legendTitle": trait, "key": trait} for trait in args.continuous_traits: meta_json["color_options"][trait] = {"menuItem": trait, "type": "continuous", "legendTitle": trait, "key": trait} json.dump(tree_json, open("{}_tree.json".format(args.output_prefix), 'w'), indent=2) json.dump(meta_json, open("{}_meta.json".format(args.output_prefix), 'w'), indent=2) logger.info("DONE") augur-24.2.2/scripts/verify_meta_json.py000066400000000000000000000025241456376326500203540ustar00rootroot00000000000000from __future__ import print_function import sys sys.path.append('..') # this is an assumption and is probably wrong import argparse import json def verify_defaults(defaults): booleans = ["mapTriplicate"]; strings = ['geoResolution', 'colorBy', 'distanceMeasure'] for trait in booleans: if (trait in defaults): if type(defaults[trait]) is not bool: print("ERROR: defaults -> {} is not boolean".format(trait)) for trait in strings: if (trait in defaults): if type(defaults[trait]) is not str: print("ERROR: defaults -> {} is not a string".format(trait)) def verify_author_info(arg): pass if __name__=="__main__": parser = argparse.ArgumentParser(description = "Verify metadata JSONs") parser.add_argument('--json', required=True, type=str, help="metadata JSON") params = parser.parse_args() try: with open(params.json, 'r') as fh: data = json.load(fh) except: print("Couldn't even load the file - big problems!") if "defaults" in data: verify_defaults(data["defaults"]) if "author_info" in data: verify_author_info(data["author_info"]) else: print("ERROR: author_info does not exist. This build needs to be updated and will soon be incompatible with auspice.") # set_trace() augur-24.2.2/setup.py000066400000000000000000000101011456376326500144500ustar00rootroot00000000000000from pathlib import Path import setuptools import sys py_min_version = (3, 8) # minimal supported python version since_augur_version = (23, 0) # py_min_version is required since this augur version if sys.version_info < py_min_version: error = """ Beginning with augur {0}, Python {1} or above is required. You are using Python {2}. This may be due to an out of date pip. Make sure you have pip >= 9.0.1. """.format('.'.join(str(n) for n in since_augur_version), '.'.join(str(n) for n in py_min_version), '.'.join(str(n) for n in sys.version_info[:3])) sys.exit(error) base_dir = Path(__file__).parent.resolve() version_file = base_dir / "augur/__version__.py" readme_file = base_dir / "README.md" # Eval the version file to get __version__; avoids importing our own package with version_file.open() as f: exec(f.read()) # Get the long description from the README file with readme_file.open(encoding = "utf-8") as f: long_description = f.read() setuptools.setup( name = "nextstrain-augur", version = __version__, # noqa: F821; This is imported from version_file. author = "Nextstrain developers", author_email = "trevor@bedford.io, richard.neher@unibas.ch", description = "A bioinformatics toolkit for phylogenetic analysis", long_description = long_description, long_description_content_type = "text/markdown", keywords = "nextstrain, molecular epidemiology", url = "https://github.com/nextstrain/augur", project_urls = { "Bug Reports": "https://github.com/nextstrain/augur/issues", "Change Log": "https://github.com/nextstrain/augur/blob/master/CHANGES.md#next", "Source": "https://github.com/nextstrain/augur", }, packages = setuptools.find_packages(), package_data = {'augur': ['data/*']}, python_requires = '>={}'.format('.'.join(str(n) for n in py_min_version)), install_requires = [ "bcbio-gff >=0.7.1, ==0.7.*", # TODO: Remove biopython >= 1.80 pin if it is added to bcbio-gff: https://github.com/chapmanb/bcbb/issues/142 "biopython >=1.80, ==1.*", "cvxopt >=1.1.9, ==1.*", "importlib_resources >=5.3.0; python_version < '3.11'", "isodate ==0.6.*", "jsonschema >=3.0.0, ==3.*", "networkx >= 2.5, ==2.*", "numpy ==1.*", "packaging >=19.2", "pandas >=1.0.0, ==1.*", "phylo-treetime >=0.11.2, <0.12", "pyfastx >=1.0.0, <3.0", "scipy ==1.*", "xopen[zstd] >=1.7.0, ==1.*" ], extras_require = { 'dev': [ "cram >=0.7", "deepdiff >=4.3.2", "flake8", "freezegun >=0.3.15", "mypy", "nextstrain-sphinx-theme >=2022.5", "pandas-stubs >=1.0.0, ==1.*", "pylint >=1.7.6", "pytest >=5.4.1", "pytest-cov >=2.8.1", "pytest-mock >= 2.0.0", "recommonmark >=0.5.0", "Sphinx >=2.0.1", "sphinx-autobuild >=2021.3.14", "sphinx-argparse >=0.2.5", "sphinx-markdown-tables >= 0.0.9", "sphinx-rtd-theme >=0.4.3", "sphinx-autodoc-typehints >=1.21.4", "sphinx-tabs", "types-jsonschema >=3.0.0, ==3.*", "types-setuptools", "wheel >=0.32.3", "ipdb >=0.10.1" ] }, classifiers = [ "Development Status :: 5 - Production/Stable", "Topic :: Scientific/Engineering :: Bio-Informatics", "License :: OSI Approved :: GNU Affero General Public License v3", # Python 3 only "Programming Language :: Python :: 3", "Programming Language :: Python :: 3.8", "Programming Language :: Python :: 3.9", "Programming Language :: Python :: 3.10", "Programming Language :: Python :: 3.11", ], # Install an "augur" program which calls augur.__main__.main() # https://setuptools.readthedocs.io/en/latest/setuptools.html#automatic-script-creation entry_points = { "console_scripts": [ "augur = augur.__main__:main", ] } ) augur-24.2.2/tests/000077500000000000000000000000001456376326500141075ustar00rootroot00000000000000augur-24.2.2/tests/data/000077500000000000000000000000001456376326500150205ustar00rootroot00000000000000augur-24.2.2/tests/data/aa-seq_h3n2_ha_2y_HA1.fasta000066400000000000000000000020451456376326500215550ustar00rootroot00000000000000>A/Victoria/361/2011 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQNSSIGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFLYAQSSGRITVSTKRSQQAVIPNIGSRPRIRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQSTLKLATGMRNVPEKQTR >A/Hawaii/22/2012 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDRIEVTNATELVQNSSIGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHSNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFLYAQSSGRITVSTKRSQQAVIPNIGSRPRIRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCKSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQSTLKLATGMRNVPEKQTR >A/Texas/50/2012 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDRIEVTNATELVQNSSIGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWNGVTQNGTSSACIRRSNNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFLYAQPSGRITVSTKRSQQAVIPNIGSRPRIRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCKSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQSTLKLATGMRNVPEKQTR augur-24.2.2/tests/data/align/000077500000000000000000000000001456376326500161125ustar00rootroot00000000000000augur-24.2.2/tests/data/align/aa-seq_h3n2_ha_2y_HA1_dup.fasta000066400000000000000000000026051456376326500235210ustar00rootroot00000000000000>A/Victoria/361/2011 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQNSSIGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFLYAQSSGRITVSTKRSQQAVIPNIGSRPRIRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQSTLKLATGMRNVPEKQTR >A/Hawaii/22/2012 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDRIEVTNATELVQNSSIGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHSNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFLYAQSSGRITVSTKRSQQAVIPNIGSRPRIRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCKSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQSTLKLATGMRNVPEKQTR >A/Texas/50/2012 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDRIEVTNATELVQNSSIGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWNGVTQNGTSSACIRRSNNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFLYAQPSGRITVSTKRSQQAVIPNIGSRPRIRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCKSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQSTLKLATGMRNVPEKQTR >A/Texas/50/2012 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDRIEVTNATELVQNSSIGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWNGVTQNGTSSACIRRSNNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFLYAQPSGRITVSTKRSQQAVIPNIGSRPRIRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCKSECITPNGSIPNDKPFQNVNRI TYGACPRYATQSTLKLATGMRNVPEKQTR augur-24.2.2/tests/data/align/test_aligned_sequences.fasta000066400000000000000000000001661456376326500236520ustar00rootroot00000000000000>with_gaps ---ATATA--- >no_gaps GGGATATAGGG >some_other_seq --GATCTAGGG >_R_crick_strand some description -GGATATAGG- augur-24.2.2/tests/data/align/test_unaligned_sequences.fasta000066400000000000000000000001511456376326500242070ustar00rootroot00000000000000>with_gaps ATATA >no_gaps GGGATATAGGG >some_other_seq GATCTAGGG >crick_strand some description CCTATATCC augur-24.2.2/tests/data/clades/000077500000000000000000000000001456376326500162535ustar00rootroot00000000000000augur-24.2.2/tests/data/clades/commented_clades.tsv000066400000000000000000000002001456376326500222670ustar00rootroot00000000000000clade gene site alt # Comment Clade_1 ctpE 81 D # Comment Clade_2 nuc 30642 T Clade_3 nuc 444296 A# Comment Clade_3 pks8 634 T augur-24.2.2/tests/data/clades/empty_lines_clades.tsv000066400000000000000000000001451456376326500226540ustar00rootroot00000000000000clade gene site alt Clade_1 ctpE 81 D Clade_2 nuc 30642 T Clade_3 nuc 444296 A Clade_3 pks8 634 T augur-24.2.2/tests/data/clades/inherit_chained_clades.tsv000066400000000000000000000001731456376326500234420ustar00rootroot00000000000000clade gene site alt Clade_1 ctpE 81 D Clade_2 clade Clade_1 Clade_2 nuc 30642 T Clade_3 clade Clade_2 Clade_3 pks8 634 T augur-24.2.2/tests/data/clades/inherit_clades.tsv000066400000000000000000000001441456376326500217650ustar00rootroot00000000000000clade gene site alt Clade_1 ctpE 81 D Clade_2 nuc 30642 T Clade_3 clade Clade_2 Clade_3 pks8 634 T augur-24.2.2/tests/data/clades/inherit_cycle_clades.tsv000066400000000000000000000001731456376326500231460ustar00rootroot00000000000000clade gene site alt Clade_1 ctpE 81 D Clade_2 nuc 30642 T Clade_2 clade Clade_3 Clade_3 clade Clade_2 Clade_3 pks8 634 T augur-24.2.2/tests/data/clades/multiple_inheritance_clades.tsv000066400000000000000000000001731456376326500245310ustar00rootroot00000000000000clade gene site alt Clade_1 ctpE 81 D Clade_2 nuc 30642 T Clade_3 clade Clade_1 Clade_3 clade Clade_2 Clade_3 pks8 634 T augur-24.2.2/tests/data/clades/nonexistent_clade_inheritance_clades.tsv000066400000000000000000000001441456376326500264020ustar00rootroot00000000000000clade gene site alt Clade_1 ctpE 81 D Clade_2 nuc 30642 T Clade_3 clade Clade_X Clade_3 pks8 634 T augur-24.2.2/tests/data/clades/self_inherit_clades.tsv000066400000000000000000000001441456376326500227760ustar00rootroot00000000000000clade gene site alt Clade_1 ctpE 81 D Clade_2 nuc 30642 T Clade_3 clade Clade_3 Clade_3 pks8 634 T augur-24.2.2/tests/data/clades/simple_clades.tsv000066400000000000000000000001411456376326500216110ustar00rootroot00000000000000clade gene site alt Clade_1 ctpE 81 D Clade_2 nuc 30642 T Clade_3 nuc 444296 A Clade_3 pks8 634 Taugur-24.2.2/tests/data/distance_map_weight_per_site.json000066400000000000000000000001311456376326500235760ustar00rootroot00000000000000{ "default": 0, "map": { "HA1": { "145": 1 } } } augur-24.2.2/tests/data/distance_map_weight_per_site_and_sequence.json000066400000000000000000000003611456376326500263150ustar00rootroot00000000000000{ "default": 0.0, "map": { "SigPep": { "1": [ { "from": "W", "to": "P", "weight": -8.3 } ] } } } augur-24.2.2/tests/data/fitness_model/000077500000000000000000000000001456376326500176535ustar00rootroot00000000000000augur-24.2.2/tests/data/fitness_model/AAK51718.fasta000066400000000000000000000012101456376326500216670ustar00rootroot00000000000000>AAK51718.1 hemagglutinin [Influenza A virus (A/Hong Kong/1/1968(H3N2))] MKTIIALSYIFCLALGQDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNN PHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEG FTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGVHHPSTNQEQTSL YVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGK SSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQTRGLFGA IAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEG RIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCD NACIESIRNGTYDHDVYRDEALNNRFQIKGVELKSGYKDWILWISFAISCFLLCVVLLGFIMWACQRGNI RCNICI augur-24.2.2/tests/data/fitness_model/H3N2_alignment.cleaned.fasta000066400000000000000000000133531456376326500250020ustar00rootroot00000000000000>A/Singapore/TT0495/2017 tggaaagaataaaagaactacggaatctaatgtcgcagtctcgcactcgcgagatactga caaaaaccacagtggaccatatggccataattaagaagtacacatcggggagacaggaaa agaacccgtcacttaggatgaaatggatgatggcaatgaaatatccaattactgctgaca aaaggataacagaaatggttccggagagaaatgaacaaggacaaactctatggagtaaaa tgagtgatgctggatcaaataggaatggacccgtgacaaatacattacccaaaagtgtac aaaacttaaagtcgaaaggttaaatagaaatcaagtcaagaagaagagtagacataaacc ctggtcatgcagacctcagtgccaaagaggcacaagatgtaattatggattcccaatgaa gtgggagccagaatactaacatcagaatcacagctaacaataactaaagagaaaaaagaa gaactccgagattgcacttgatggtcgcatacatgtagagagagaacttgtgcggaaaag ctggcggaacaagcagtatatacattgaagttttacatttgactcaaggaacgtgttggg aacaaatgtacactccaggtggaggagtgaggaatgacgatgttgaccaaagcctaatta ttgcggccaggaacatagtaagaagagccgcagtgcagatccactcgcatctttattgga gatgtgccacagcacgcaaattgaacaaggatggtttagacagaacccgactgaagaaca agctgtggatatatgcaaagctgcaagattgagaagtggctttacatttaaaagaacgag cgggtcgtcagtcaaaagagaggaagaggttcttacaggcaatctccagaaggggtatga ggagttcacaatggtggggaaaagagcaacagctatactaagaaaagcaaccagaagact ggttcaactcatagtgagtggaagagacgaacagtcaatagccgaagcaataatcgtggc catggtgttttcacaagaagattgcatgataaaagcatagaggtgacctgaattttgtca acagagcaaatcagcggttgaaccccatgcatcagcttttaaggcattttcagaaagagc gaaagtactctttcaaaattgcagtgtgatgggaatcaatgagaggaataagagtcagca aaatgggtgtggatgaatactccagtacagagagggtggtggttagcattgatcggtttt tgagagttcgagaccaacgtgtctcctgaggaggtcagtgaaacacagggaactgaaaga ctgaccataacttattcatcatcgatgatgtgggagattaacggtcctgagtcggttttg gtcaatacctatcaatggatcatcaggaattgggaagctatggtctcagaaccctgcaat gttgacaacaaaatggaatttgaaccatttcaatctttagtccccaaggccactagaagc caatacagtgggtttgtcagaactctattccaacaaatgagagacgtacttgggacattt gacactgcccagataataaagcttctcccttttgcagctgctccaccgaagcaaagcaga atgcagttctcttcactgactgtgaatgtgaggggatcagggatgaacaagaccactaaa aggctaacaattcttggaaaagatgccggcattttaattgaagacccagatgaaagcaca tccggagtggagtccgccgtcttgagagtcctcattataggtaaagaagacagaagatac ggaagcattaagactgagtaaccttgcaaaaggggaaaaggctaatgtgctaattgggca aggagacgacggaaacaaagaattcggatggccatcaattaa >A/Brazil/2047/2015 tggaaagaataaaagaactacggaatctaatgtcgcagtctcgcacccgcgagatactga caaaaaccacagtggaccatatggccataattaagaagtacacatcggggagacaggaaa agaacccgtcacttaggatgaagtggatgatggcaatgaaatatccaatcactgctgaca aaaggataacagaaatggttccggagagaaatgaacaaggacaaactctatggagtaaaa tgagtgatgctggatcaaataggaatggacccgtgacaagtacattacccaaaagtgtac aaaacttaaagtcgaaaggttaaatagaaatcaagtcaagaagaagagtagacataaacc ctggtcatgcagacctcagtgccaaagaggcacaagatgtaattatggattcccaatgaa gtgggagccagaatactaacatcagaatcacagctaacaataactaaagagaaaaaagaa gaactccgagattgcacttgatggtcgcatacatgtagagagagaacttgtgcggaaaag ctggcggaacaagcagtatatacattgaagttttacatttgactcaaggaacgtgttggg aacaaatgtacactccaggtggaggagtgaggaatgacgatgttgaccaaagcctaatta ttgcggccaggaacatagtaagaagagccgcagtgcagatccactagcatctttactgga gatgtgccacagcacgcaaattgaacaaggatggtttagacagaacccgactgaagaaca agctgtggatatatgcaaggctgcaagattgagaagtggctttacatttaaaagaacaag cgggtcgtcagtcaaaaaagaagaagaggttcttacaggcaatctccaaaaggggtatga ggagttcacaatggtggggaaaagagcaacagctatactaagaaaagcaaccagaagatt ggttcaactcatagtgagtggaagagacgaacagtcaatagccgaagcaataatcgtggc catggtgttttcacaagaagattgcatgataaaagcatagaggtgacctgaattttgtca acagagcaaatcagcggttgaaccccatgcatcagcttttaaggcattttcagaaagagc gaaagtactctttcaaaattgcagtgtgatgggaatcaatgagaggaataagagtcagca aaatgggtgtggatgaatactccagtacagagagggtggtggttagcattgatcggtttt tgagagttcgagaccaacgtgtctcctgaggaggtcagtgaaacacagggaactgaaaga ctgacaataacttattcatcgtcgatgatgtgggagattaacggtcctgagtcggttttg gtcaatacctatcaatggatcatcaggaattgggaagctatggtctcagaatcctgcaat gttgacaacaaaatggaatttgaaccatttcaatctttagtccccaaggccactagaagc caatacagtgggtttgtcagaactctattccaacaaatgagagacgtacttgggacattt gacactgcccagataataaagcttctcccttttgcagctgctccaccgaagcaaagcaga atgcagttctcttcactgactgtgaatgtgaggggatcagggatgaacaagaccactaaa aggctaacaattctcggaaaagatgccggcactttaattgaagacccagatgaaagcaca tccggagtggagtccgccgtcttgagagtcctcattataggtaaagaagacagaagatac ggaagcattaagactgagtaaccttgcaaaaggggaaaaggctaatgtgctaattgggca aggagacgacgaaaacaaagaattcggatggccatcaattaa >A/Taiwan/1051/2015 ttgaatggatgtaaaagttccagcgcaaaatgccataaccatacagccatggaacaggga cagggtacactatggacacagtcaacagaacacaccaatactcagagagrgggaagtgga cgaaccactacctgaggataaagtggatatgcacaaacagacacccaggtatctttgaga atgaaacaatggaagccgttcaacagacaagggtggacaaactaacccaaggtcgccaga cttatgattggacattaaacaggaaccaaccggcagcaactgcattagccaacaccatag aagtctttagatcgaacggattaacagctaatgaatcaggaaggctaatagatttcctca aggatgtgatggaatcaatggataaggaggaaatggagataacaacacactttcaaagaa aaaggagagtaagggacaacataagaacaatagggaagaaaaaacaaagagtgaaaataa gagctctaacattaaacacgatgaccaaggatgcagagagaggcaaattaaaaagaaggg ctattgcaacacccgggatgcaaattagagttgaaactttagctagaagcatttgcgaaa agccaatctggacttccggttgggggtaatgaaaagaagatgatgactaattcacaatca caatcactggggacacactaagtggaatgaaaatcaaaacccccgaatgtttttggcgat gattacatacatcacaaagaatcaacctgaatggttcagaaacatcctgagcatcgcacc aataatgttctcaaacaaaatggcaagactgggaaaaggatacatgttcgagagagagaa tgaagctccggacaaaatacctgcagaaatgctagcaagcattgacctgaagtatttcaa tgaatcaacaaggaagaaaaagaaaataaggcctcttctaatagatggcacagcatcatt gagccctggaatgatgatgggcatgttcaacatgctaagtacagtcttaggagtctcgat actgaatcttggacaaaagaaatacaccaagacaacatactggtgggatgggctccaatc ctcagacgattttgccctcatagtgaatgcaccaaatcatgagggaatacaagcaggagt ggatagattctataggacctgcaagttagtgggaatcaacatgagcaaaaagaataaata aaacagggacatttgaattcactagcttatatggatttgtggttagcatggagcagtttt ggagtgtctggaataaacgagtcagctgacatgagcattggagtataaagaacaacatga taaataatgacttgttcatcaaagattacagatacacgtatcggtgccaagaggagacac acaaatccaaacgagaagatcattcgagataaagaagctatgggatcaaaccccaggact attgatatcagatgggggaccaaacttatacaatatccggtccctgaagtcagtgggagc tgatggatgagaattatcggggccctttgtcagccataaagaaatgtaatgccagcccat ggtccagccaaaagtatggaatatgatgccgttgcaactacacactcctggattcccaaa aggaaccgctctattctaaacacaagccaaaggggattgaggatgaacagatgtaccaga agtgctgcaacttrttcgagaaatcctagtagttcatataggagaccgattggaatttct agcatggtggaggcmatggtgtctagggcccggattgatgccagaattgacttcgagtct ggaaggattaagaaggaagagttctctgagatcatgaagatctgttccaccattgaagaa ctcagacggcaaaaataatgaatttagcttgtccttcatgaa augur-24.2.2/tests/data/fitness_model/H3N2_alignment.fasta000066400000000000000000000201271456376326500234050ustar00rootroot00000000000000>A/Singapore/TT0495/2017 --------tggaaagaata---------------------aaagaactacggaatctaat gtcgcag-----------------------------tctcgcactcgcgagatactgaca aaaaccacagtggaccatatggccataattaagaagtacacatcggggagacaggaaaag a-------------------------------------------acccgtcacttaggat g-------aaatggatgatggcaatgaaa------------------------------- ------tatccaattactgctgacaa---------aaggataacagaaatggttccggag agaaatgaacaaggacaaactctatggagtaaaatgagtgatgctggatcagatagagtg atggtatcacctttggctgtaacatggtggaataggaatggacccgtgacaaatacggtc cattacccaaaagtgtacaaaacttatttcgacaaagtcgaaaggttaaaacatggaacc tttggccctgtccattttagaaatcaagtcaagatacgcagaagagtagacataaaccct ggtcatgcagacctcagtgccaaagaggcacaagatgtaattatggaagttgtttttccc aatgaagtgggagccagaatactaacat---------------------cagaatcacag ctaacaataactaaagagaaaa---------------aagaagaactccgagattgcaaa atttctcccttgatggtcgcatacatgctagagagagaacttgtgcggaaaacaagattt ctcccagttgctggcggaacaagcagtatatacattgaa---------------gtttta catttgactcaaggaacgtgttgggaac-----aaatgtacactccaggtggaggagtga ggaatgacg---------------------------atgttgaccaaagcctaa------ ----------ttattgcggccaggaac-atagtaagaagagccgcagtgtcagcagatcc actcgcatctttattggagatgtgccacagcacgcaaattggcggaacaaggatggtgga cattcttagacagaacccgactgaagaacaagctgtggatatatgcaaagctgcaatggg attgagaatcagctcatctttcagctttggtggctttacatttaaaag--aacgagcggg tcgtcagtca-aaagagaggaagaggttcttacaggcaatctccagacattgagaataag agtacatgaggggtatgaggagttcacaatggtgggga---aaagagcaacagctatact aagaaaagcaaccagaagactggttcaactcatagtgagtggaagagacgaacagtcaat agccgaagcaataatcgtggccatggtgttttcacaagaagattgcatgataaaagcagt tagaggtgacctgaattttgtcaacagagcaaatcagcggttgaaccccatgcatcagct tttaaggcattttcagaaagatgcgaaagtactctttcaaaattggggagttgaacacat cgacagtgtgatgggaatggttggagtattaccagatatgactccaagcacagagatgtc aatgagaggaataaga--------gtcagcaaaatgggtgtggatgaatactccagtac- --------agagagggtggtgg------ttagcattgatc-----ggtttttgagagttc gagaccaacgtgggaatgtattattatctcctgaggaggtcagtgaaac-------acag ggaactgaaagactgaccataac---------------------------------ttat tcatcatcgatgatgtgggagattaacggtcctg-agtcggttttggtcaatacctatca atggatcatcaggaattgggaagctgtcaaaattcaatggtctcagaacc---------c tgcaatgttgtacaacaaaatggaatttgaaccatttcaatctttag----------tcc ccaaggcc-------actagaagccaatacagtgggtttgtcagaa-------------- --------ctctattccaacaaatgagagac----------------------gtacttg ggacatttgacactgcccagataataaagcttctcccttttgcagctgctccaccgaagc aaagcagaatgcagttctcttcactgactgtgaatgtgagggga----tcagggatgaga atacttgtaaggggcaattctcctgtattcaactacaacaagaccactaaaaggctaaca attcttggaaaagat-----gccggcattttaattgaagacccagatgaaagcacatccg gagtggagtccgccgtcttgagagggttcctcattataggtaaagaagacagaagatacg gaccagcattaagcatcaatgaactgagtaaccttgcaaaaggggaaaaggctaatgtgc taattgggcaaggagacgtggtgttggtaatgaaacggaaacgggactctagtatactta ctgacagccagacagcgaccaaaagaattcggatggccatcaattaa------ >A/Brazil/2047/2015 -------atggaaagaata---------------------aaagaactacggaatctaat gtcgcag-----------------------------tctcgcacccgcgagatactgaca aaaaccacagtggaccatatggccataattaagaagtacacatcggggagacaggaaaag a-------------------------------------------acccgtcacttaggat g-------aagtggatgatggcaatgaaa------------------------------- ------tatccaatcactgctgacaa---------aaggataacagaaatggttccggag agaaatgaacaaggacaaactctatggagtaaaatgagtgatgctggatcagatagagtg atggtatcacctttggctgtaacatggtggaataggaatggacccgtgacaagtacggtc cattacccaaaagtgtacaaaacttatttcgacaaagtcgaaaggttaaaacatggaacc tttggccctgtccattttagaaatcaagtcaagatacgcagaagagtagacataaaccct ggtcatgcagacctcagtgccaaagaggcacaagatgtaattatggaagttgtttttccc aatgaagtgggagccagaatactaacat---------------------cagaatcacag ctaacaataactaaagagaaaa---------------aagaagaactccgagattgcaaa atttctcccttgatggtcgcatacatgttagagagagaacttgtgcggaaaacaagattt ctcccagttgctggcggaacaagcagtatatacattgaa---------------gtttta catttgactcaaggaacgtgttgggaac-----aaatgtacactccaggtggaggagtga ggaatgacg---------------------------atgttgaccaaagcctaa------ ----------ttattgcggccaggaac-atagtaagaagagccgcagtgtcagcagatcc actagcatctttactggagatgtgccacagcacgcaaattggcggaacaaggatggtgga cattcttagacagaacccgactgaagaacaagctgtggatatatgcaaggctgcaatggg attgagaatcagctcatccttcagctttggtggctttacatttaaaag--aacaagcggg tcgtcagtca-aaaaagaagaagaggttcttacaggcaatctccaaacattgagaataag agtacatgaggggtatgaggagttcacaatggtgggga---aaagagcaacagctatact aagaaaagcaaccagaagattggttcaactcatagtgagtggaagagacgaacagtcaat agccgaagcaataatcgtggccatggtgttttcacaagaagattgcatgataaaagcagt tagaggtgacctgaattttgtcaacagagcaaatcagcggttgaaccccatgcatcagct tttaaggcattttcagaaagatgcgaaagtactctttcaaaattggggagttgaacacat cgacagtgtgatgggaatggttggagtattaccagatatgactccaagcacagagatgtc aatgagaggaataaga--------gtcagcaaaatgggtgtggatgaatactccagtac- --------agagagggtggtgg------ttagcattgatc-----ggtttttgagagttc gagaccaacgtgggaatgtattattatctcctgaggaggtcagtgaaac-------acag ggaactgaaagactgacaataac---------------------------------ttat tcatcgtcgatgatgtgggagattaacggtcctg-agtcggttttggtcaatacctatca atggatcatcaggaattgggaagctgtcaaaattcaatggtctcagaatc---------c tgcaatgttgtacaacaaaatggaatttgaaccatttcaatctttag----------tcc ccaaggcc-------actagaagccaatacagtgggtttgtcagaa-------------- --------ctctattccaacaaatgagagac----------------------gtacttg ggacatttgacactgcccagataataaagcttctcccttttgcagctgctccaccgaagc aaagcagaatgcagttctcttcactgactgtgaatgtgagggga----tcagggatgaga atacttgtaaggggcaattctcctgtattcaactacaacaagaccactaaaaggctaaca attctcggaaaagat-----gccggcactttaattgaagacccagatgaaagcacatccg gagtggagtccgccgtcttgagagggttcctcattataggtaaagaagacagaagatacg gaccagcattaagcatcaatgaactgagtaaccttgcaaaaggggaaaaggctaatgtgc taattgggcaaggagacgtagtgttggtaatgaaacgaaaacgggactctagtatactta ctgacagccagacagcgaccaaaagaattcggatggccatcaattaa------ >A/Taiwan/1051/2015 caaaccatttgaatggatgtcaatccgactctactgttcttaaaagttccagcgcaaaat gccataagcacaacattcccttatactggagatcctccatacagccatggaacagggaca gggtacactatggacacagtcaacagaacacaccaatactcagagagrgggaagtggacg acaaatacagaaactggggctccccagctcaacccaattgatggaccactacctgaggat aatgaaccaagtggatatgcacaaacagactgtgtcctggaggctatggccttccttgaa gaatcccacccaggtatctttgagaactcctgccttgaaacaatggaagccgttcaacag acaagggtggacaaactaacccaaggtcgccagacttatgattggacatta--------- ------------------------------aacaggaaccaaccggcagcaactg----- cattagccaacaccatagaagtctt--------tagatcgaacggattaa---------- -----------------cagctaatgaatcagga-----aggctaatagatttcctcaag gatgtgatggaatcaatggataaggaggaaatggagataacaacaca--------ctttc aaagaaaaaggagagtaagggacaacatgaccaagaaaatggtcacacaaagaacaatag ggaagaaaaaacaaagagtgaataagagaggctacctaataagagctctaacattaaa-- --------cacgatgaccaaggatgca-gagagaggcaaattaaaaagaagg-------- ---------gctattgcaacacccgggatgcaaattagagggttcgtgtacttcgttgaa actttagctagaagcatttgcgaaaagcttgaacaatctggacttccggttgggggtaat gaaaagaaggccaaactggcaaatgttgtgagaaaaatgatgactaattcacaagacaca gagctttctttcacaatcactggggacaacactaagtggaatgaaaat----caaaaccc ccgaatgtttttggcgatgattacatacatcacaaagaat----caacctgaatggt--- -----tcagaaacatcctgagcatcgcaccaataatgttctcaaacaaaatggcaa---g actgggaa---------------------aaggatacatgttcgagagtaagagaatgaa gctccggacacaaatacctgcagaaatgctagcaagcattgacctga------------- --------agtatttcaatgaatcaacaaggaagaaaattgagaaaataaggcctcttct aatagatggcacagcatcattgagccctggaatgatgatgggcatgttcaacatgctaag tacagtcttaggagtctcgatactgaatcttggacaaaagaaatacaccaagacaaca-- tactggtgggatgggctccaatcctcagacgattttgccctcatagtgaatgcaccaaat catgagggaatacaagcagga-gtggatagattctataggacctg--------------- ---caagttagtgggaa-----------------------------------------tc aacatgagcaaaaagaagtcctatataaataaaacagggacatttgaattcactagcttc ttttatcgatatggatttgtggctaattttagcatggagctgccaagttttggagtgtct ggaataaacgag--------------tcagctgacatgagcattggagtaacagtgataa agaacaacatgataaataatgaccttggaccagcaacagcccaaatggctctccaattgt tcatcaaagattacagatacacgtatcggtgccatagaggagacacacaaatccaaacga gaagatcattcgagataaagaagct-----------atgggatcaaacccaatcaaggac aggactattg-atatcagatgggggaccaaacttatacaatatccggaatcttcacatcc ctgaagtctgcttaaagtgggagctgatggatgagaattatcggggaagactttgtaatc ccctgaatccctttgtcagccataaagaaattgaatctgtaaacaatgctgtagtaatgc cagcccatggtccagccaaaagtatggaatatgatgccgttgcaactacacactcctgga ttcccaaaaggaaccgctctattctaaacacaagccaaaggggaattcttgaggatg--- ------------------------------------aacagatgtaccagaagtgctgca acttrttcgagaaatttttccctagtagttcatataggagaccgattggaatttctagca tggtggaggcmatggtgtctaggg---cccggattgatgccagaattgacttcgagtctg ga--aggattaag---------aaggaagagttctctgagatcatgaagatctgttccac cattgaagaactcagacg----------------gcaaaaat------------------ ---------------------aatgaatttagcttgtccttcatgaaaaaatg augur-24.2.2/tests/data/fitness_model/H3N2_tree.newick000066400000000000000000000001531456376326500225450ustar00rootroot00000000000000('A/Singapore/TT0495/2017':0.003989715,'A/Brazil/2047/2015':0.005549540,'A/Taiwan/1051/2015':0.792682418); augur-24.2.2/tests/data/flu_seasonal_h3n2_ha_3y_tree.json000066400000000000000000013143601456376326500233320ustar00rootroot00000000000000{"attr": {"num_date": 2011.2995371727798, "num_date_confidence": [2010.6902194440688, 2011.45820590422], "region_confidence": {"oceania": 0.8238277625442161, "north_america": 0.17612649606873498}, "region": "oceania", "age_score": 0, "region_entropy": 0.20240635685766434, "ne": 0, "clade_annotation": "3c", "glyc": 12, "num_gender": 0.06367041198501873, "avg_age": 33.21910569105691, "rb": 0, "lbi": 0.11393496715961733, "div": 0, "age": 33.21910569105691, "ep": 0, "clade_membership": "3c"}, "strain": "NODE_0000267", "clade": 0, "tvalue": 0.0, "children": [{"xvalue": 0.00236, "tvalue": 0.51087, "clade": 1, "strain": "A/Victoria/361/2011", "muts": ["T25C", "T72C", "A1254C"], "aa_muts": {"SigPep": ["Y9H"], "HA1": [], "HA2": []}, "yvalue": 267.0, "attr": {"num_date_confidence": [2011.8104038329911, 2011.8104038329911], "region_confidence": {"oceania": 1.0}, "age_score": 0, "strain": "A/Victoria/361/2011", "num_date": 2011.8104038329911, "lbi": 0.03176805329876719, "ep": 0, "region_entropy": -0.0, "ne": 1, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 0, "isolate_id": "EPI545346", "division": "victoria", "avg_age": 33.21910569105691, "authors": "other_database_import", "date": "2011-10-24", "gender": "?", "region": "oceania", "raw_date": "2011-10-24", "country": "australia", "div": 0.0023582347988321335, "age": "unknown", "clade_membership": "3c"}}, {"xvalue": 0.00118, "tvalue": 0.08877, "clade": 2, "strain": "NODE_0000236", "muts": ["A146G", "T882G", "A1413G"], "aa_muts": {"SigPep": [], "HA1": ["Q33R", "N278K"], "HA2": []}, "children": [{"xvalue": 0.00413, "tvalue": 1.22065, "clade": 3, "strain": "A/Hawaii/22/2012", "muts": ["G39A", "T518C", "G1087A", "T1113C", "C1245T"], "aa_muts": {"SigPep": [], "HA1": ["L157S"], "HA2": ["V18M"]}, "yvalue": 266.0, "attr": {"num_date_confidence": [2012.520191649555, 2012.520191649555], "region_confidence": {"north_america": 1.0}, "age_score": 0, "strain": "A/Hawaii/22/2012", "num_date": 2012.520191649555, "lbi": 0.008106036191704155, "ep": 2, "region_entropy": -0.0, "ne": 2, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 0, "isolate_id": "EPI397072", "division": "hawaii", "avg_age": 33.21910569105691, "authors": "centers_for_disease_control_and_prevention", "date": "2012-07-09", "gender": "male", "region": "north_america", "raw_date": "2012-07-09", "country": "usa", "div": 0.0041260675549423045, "age": 70, "clade_membership": "3c"}}, {"xvalue": 0.00531, "tvalue": 0.98794, "clade": 4, "strain": "A/Texas/50/2012", "muts": ["G171A", "C431A", "G605T", "T640C", "C704T", "T725A", "A1011G"], "aa_muts": {"SigPep": [], "HA1": ["T128N", "G186V", "S198P", "S219F", "I226N"], "HA2": []}, "yvalue": 265.0, "attr": {"num_date_confidence": [2012.2874743326488, 2012.2874743326488], "region_confidence": {"north_america": 1.0}, "age_score": 0, "strain": "A/Texas/50/2012", "num_date": 2012.2874743326488, "lbi": 0.014503678186114366, "ep": 6, "region_entropy": -0.0, "ne": 1, "passage": "egg", "glyc": 11, "num_gender": -1, "rb": 0, "isolate_id": "EPI731465", "division": "texas", "avg_age": 33.21910569105691, "authors": "national_institute_for_biological_standards_and_control__nibsc_", "date": "2012-04-15", "gender": "male", "region": "north_america", "raw_date": "2012-04-15", "country": "usa", "div": 0.005313035449073509, "age": "unknown", "clade_membership": "3c"}}, {"xvalue": 0.00177, "tvalue": 0.33595, "clade": 5, "strain": "NODE_0000235", "muts": ["A482G"], "aa_muts": {"SigPep": [], "HA1": ["N145S"], "HA2": []}, "children": [{"xvalue": 0.00649, "tvalue": 1.21518, "clade": 6, "strain": "A/Christchurch/516/2012", "muts": ["C387A", "A688G", "G693T", "C732T", "A1005G", "C1272T", "G1416A", "A1614G"], "aa_muts": {"SigPep": [], "HA1": ["I214V"], "HA2": ["I193M"]}, "yvalue": 264.0, "attr": {"num_date_confidence": [2012.514715947981, 2012.514715947981], "region_confidence": {"oceania": 1.0}, "age_score": 0, "strain": "A/Christchurch/516/2012", "num_date": 2012.514715947981, "lbi": 0.021031154890279662, "ep": 3, "region_entropy": -0.0, "ne": 2, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 1, "isolate_id": "EPI394152", "division": "canterbury", "avg_age": 33.03880718954248, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2012-07-07", "gender": "male", "region": "oceania", "raw_date": "2012-07-07", "country": "new_zealand", "div": 0.006491387682381285, "age": 65, "clade_membership": "3c"}}, {"xvalue": 0.00294, "tvalue": 0.77995, "clade": 7, "strain": "NODE_0000234", "muts": ["C285T", "A1524G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.00471, "tvalue": 1.33877, "clade": 8, "strain": "NODE_0000238", "muts": ["A430G", "A472G", "T1296A"], "aa_muts": {"SigPep": [], "HA1": ["T128A", "R142G"], "HA2": []}, "children": [{"xvalue": 0.00589, "tvalue": 1.77165, "clade": 9, "strain": "A/Almaty/2958/2013", "muts": ["T987A", "C1121T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["S29F"]}, "yvalue": 263.0, "attr": {"num_date_confidence": [2013.0711841204654, 2013.0711841204654], "region_confidence": {"west_asia": 1.0}, "age_score": 0, "strain": "A/Almaty/2958/2013", "num_date": 2013.0711841204654, "lbi": 0.07485076965682028, "ep": 4, "region_entropy": -0.0, "ne": 2, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 1, "isolate_id": "EPI461953", "division": "almaty", "avg_age": 32.88136288998358, "authors": "national_institute_for_medical_research", "date": "2013-01-27", "gender": "female", "region": "west_asia", "raw_date": "2013-01-27", "country": "kazakhstan", "div": 0.005890511292657368, "age": "unknown", "clade_membership": "3c3"}}, {"xvalue": 0.00825, "tvalue": 2.26715, "clade": 10, "strain": "NODE_0000239", "muts": ["G460T", "T524C", "G540A", "T636A", "A721G", "T1104C"], "aa_muts": {"SigPep": [], "HA1": ["A138S", "F159S", "N225D"], "HA2": []}, "children": [{"xvalue": 0.00825, "tvalue": 2.44773, "clade": 11, "strain": "NODE_0000268", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.00884, "tvalue": 2.79903, "clade": 12, "strain": "A/Stockholm/6/2014", "muts": ["G1557A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 262.0, "attr": {"num_date_confidence": [2014.0985626283368, 2014.0985626283368], "region_confidence": {"europe": 1.0}, "age_score": 0, "strain": "A/Stockholm/6/2014", "num_date": 2014.0985626283368, "lbi": 0.054086335515405336, "ep": 6, "region_entropy": -0.0, "ne": 2, "passage": "unpassaged", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI508257", "division": "stockholm", "avg_age": 32.88136288998358, "authors": "swedish_institute_for_infectious_disease_control", "date": "2014-02-06", "gender": "male", "region": "europe", "raw_date": "2014-02-06", "country": "sweden", "div": 0.008841535344125625, "age": 30, "clade_membership": "3c3.A"}}, {"xvalue": 0.0112, "tvalue": 3.63316, "clade": 13, "strain": "NODE_0000241", "muts": ["G171A", "T328C", "C786T", "A1410G", "G1416A"], "aa_muts": {"SigPep": [], "HA1": ["Y94H"], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 4.30827, "clade": 14, "strain": "A/Uruguay/86/2015", "muts": ["C55A", "G375A", "T414C", "A645G", "A1030G"], "aa_muts": {"SigPep": [], "HA1": ["L3I", "T328A"], "HA2": []}, "yvalue": 261.0, "attr": {"num_date_confidence": [2015.6078028747434, 2015.6078028747434], "region_confidence": {"south_america": 1.0}, "age_score": 0, "strain": "A/Uruguay/86/2015", "num_date": 2015.6078028747434, "lbi": 0.001242941763247865, "ep": 7, "region_entropy": -0.0, "ne": 4, "passage": "unpassaged", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI662369", "division": "uruguay", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2015-08-11", "gender": "male", "region": "south_america", "raw_date": "2015-08-11", "country": "uruguay", "div": 0.014146849933064422, "age": 88, "clade_membership": "3c3.A"}}, {"xvalue": 0.01297, "tvalue": 4.32976, "clade": 15, "strain": "NODE_0000242", "muts": ["G630A", "A642T", "A1134G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 4.79629, "clade": 16, "strain": "A/Izmir/1089/2016", "muts": ["A1161G", "C1554T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 260.0, "attr": {"num_date_confidence": [2016.0958247775495, 2016.0958247775495], "region_confidence": {"west_asia": 1.0}, "age_score": 0, "strain": "A/Izmir/1089/2016", "num_date": 2016.0958247775495, "lbi": 0.000366933811490018, "ep": 7, "region_entropy": -0.0, "ne": 2, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI829313", "division": "izmir", "avg_age": 32.88136288998358, "authors": "crick_worldwide_influenza_centre", "date": "2016-02-05", "gender": "male", "region": "west_asia", "raw_date": "2016-02-05", "country": "turkey", "div": 0.014145077191796633, "age": 40, "clade_membership": "3c3.A"}}, {"xvalue": 0.01356, "tvalue": 4.46008, "clade": 17, "strain": "NODE_0000243", "muts": ["A231G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01473, "tvalue": 4.68061, "clade": 18, "strain": "A/Istanbul/188/2015", "muts": ["C369T", "C597T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 259.0, "attr": {"num_date_confidence": [2015.9801505817934, 2015.9801505817934], "region_confidence": {"west_asia": 1.0}, "age_score": 0, "strain": "A/Istanbul/188/2015", "num_date": 2015.9801505817934, "lbi": 0.00048998117451839, "ep": 7, "region_entropy": -0.0, "ne": 2, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI715842", "division": "istanbul", "avg_age": 32.88136288998358, "authors": "crick_worldwide_influenza_centre", "date": "2015-12-25", "gender": "male", "region": "west_asia", "raw_date": "2015-12-25", "country": "turkey", "div": 0.014733576875974397, "age": "unknown", "clade_membership": "3c3.A"}}, {"xvalue": 0.01356, "tvalue": 4.55467, "clade": 19, "strain": "NODE_0000269", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01356, "tvalue": 4.55467, "clade": 20, "strain": "A/Norway/2665/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 258.0, "attr": {"num_date_confidence": [2015.8542094455852, 2015.8542094455852], "region_confidence": {"europe": 1.0}, "age_score": 0, "strain": "A/Norway/2665/2015", "num_date": 2015.8542094455852, "lbi": 0.0006713024707861105, "ep": 7, "region_entropy": -0.0, "ne": 2, "passage": "unpassaged", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI675753", "division": "norway", "avg_age": 32.88136288998358, "authors": "norwegian_institute_of_public_health", "date": "2015-11-09", "gender": "female", "region": "europe", "raw_date": "2015-11-09", "country": "norway", "div": 0.013556072765793754, "age": 28, "clade_membership": "3c3.A"}}, {"xvalue": 0.01356, "tvalue": 4.58997, "clade": 21, "strain": "NODE_0000270", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01414, "tvalue": 4.73879, "clade": 22, "strain": "A/Austria/898258/2016", "muts": ["T225C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 257.0, "attr": {"num_date_confidence": [2016.03832991102, 2016.03832991102], "region_confidence": {"europe": 1.0}, "age_score": 0, "strain": "A/Austria/898258/2016", "num_date": 2016.03832991102, "lbi": 0.00042365466242340295, "ep": 7, "region_entropy": -0.0, "ne": 2, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI712619", "division": "austria", "avg_age": 32.88136288998358, "authors": "medical_university_vienna", "date": "2016-01-15", "gender": "female", "region": "europe", "raw_date": "2016-01-15", "country": "austria", "div": 0.014144492822935506, "age": 26, "clade_membership": "3c3.A"}}, {"xvalue": 0.01414, "tvalue": 5.14399, "clade": 23, "strain": "A/Afghanistan/243/2016", "muts": ["T1074C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 256.0, "attr": {"num_date_confidence": [2016.4435318275155, 2016.4435318275155], "region_confidence": {"west_asia": 1.0}, "age_score": 0, "strain": "A/Afghanistan/243/2016", "num_date": 2016.4435318275155, "lbi": 0.00015384011621550155, "ep": 7, "region_entropy": -0.0, "ne": 2, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI840542", "division": "afghanistan", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2016-06-11", "gender": "male", "region": "west_asia", "raw_date": "2016-06-11", "country": "afghanistan", "div": 0.014144492822935506, "age": 58, "clade_membership": "3c3.A"}}], "yvalue": 256.5, "attr": {"num_date": 2015.8895022548754, "num_date_confidence": [2015.820513400015, 2016.0139644225649], "region_confidence": {"europe": 0.9996034764609952}, "region": "europe", "age_score": 0, "region_entropy": 0.0015210748653589421, "ne": 2, "glyc": 11, "num_gender": 0.0, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.0006146099188727867, "div": 0.013556072765793754, "age": 42.0, "ep": 7, "clade_membership": "3c3.A"}}], "yvalue": 257.25, "attr": {"num_date": 2015.8542094455852, "num_date_confidence": [2015.7445399192927, 2015.8542094455852], "region_confidence": {"europe": 0.9996069088079315}, "region": "europe", "age_score": 0, "region_entropy": 0.0015093587197156791, "ne": 2, "glyc": 11, "num_gender": 0.3333333333333333, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.0006713024707861105, "div": 0.013556072712889444, "age": 37.333333333333336, "ep": 7, "clade_membership": "3c3.A"}}], "yvalue": 258.125, "attr": {"num_date": 2015.7596180043222, "num_date_confidence": [2015.6296376183952, 2015.8454697064035], "region_confidence": {"europe": 0.22820593160230881, "west_asia": 0.7717769184960017}, "region": "west_asia", "age_score": 0, "region_entropy": 0.23334863833319316, "ne": 2, "glyc": 11, "num_gender": 0.0, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.0008503928461818319, "div": 0.013556072659985135, "age": 37.333333333333336, "ep": 7, "clade_membership": "3c3.A"}}], "yvalue": 259.0625, "attr": {"num_date": 2015.629299990494, "num_date_confidence": [2015.370327351404, 2015.7648409696951], "region_confidence": {"europe": 0.22810170387965675, "west_asia": 0.7718474693091494}, "region": "west_asia", "age_score": 0, "region_entropy": 0.23344463971475302, "ne": 2, "glyc": 11, "num_gender": -0.2, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.0011779058639542943, "div": 0.012967591065177296, "age": 38.0, "ep": 7, "clade_membership": "3c3.A"}}], "yvalue": 260.03125, "attr": {"num_date": 2014.9326942277228, "num_date_confidence": [2014.7434121710005, 2015.3462573637414], "region_confidence": {"europe": 0.3740948149086229, "west_asia": 0.30778215050044905, "oceania": 0.02011163218781183, "south_america": 0.2975680114983286}, "region": "europe", "age_score": 0, "region_entropy": 0.5098509982961114, "ne": 2, "glyc": 11, "num_gender": -0.3333333333333333, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.006721105011223044, "div": 0.011199798233106809, "age": 48.0, "ep": 7, "clade_membership": "3c3.A"}}], "yvalue": 261.01563, "attr": {"num_date": 2013.7472672401238, "num_date_confidence": [2013.5818688657396, 2013.9569511736904], "region_confidence": {"europe": 0.880219014778722, "west_asia": 0.024832231136291474, "oceania": 0.08947411268543486}, "region": "europe", "age_score": 0, "region_entropy": 0.19498031457338624, "ne": 2, "glyc": 11, "num_gender": -0.42857142857142855, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.13016723492305265, "div": 0.008253094538502842, "age": 45.0, "ep": 6, "clade_membership": "3c3.A"}}, {"xvalue": 0.00884, "tvalue": 2.43171, "clade": 24, "strain": "NODE_0000246", "muts": ["A1025G"], "aa_muts": {"SigPep": [], "HA1": ["K326R"], "HA2": []}, "children": [{"xvalue": 0.01061, "tvalue": 2.62859, "clade": 25, "strain": "A/Switzerland/9715293/2013", "muts": ["T467G", "G605T", "C704A"], "aa_muts": {"SigPep": [], "HA1": ["I140R", "G186V", "S219Y"], "HA2": []}, "yvalue": 255.0, "attr": {"num_date_confidence": [2013.9281314168377, 2013.9281314168377], "region_confidence": {"europe": 1.0}, "age_score": 0, "strain": "A/Switzerland/9715293/2013", "num_date": 2013.9281314168377, "lbi": 0.12554524921712382, "ep": 9, "region_entropy": -0.0, "ne": 3, "passage": "egg", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI696955", "division": "switzerland", "avg_age": 32.88136288998358, "authors": "national_institute_for_biological_standards_and_control__nibsc_", "date": "2013-12-06", "gender": "female", "region": "europe", "raw_date": "2013-12-06", "country": "switzerland", "div": 0.01060947208581876, "age": "unknown", "clade_membership": "3c3.A"}}, {"xvalue": 0.01002, "tvalue": 2.58698, "clade": 26, "strain": "NODE_0000248", "muts": ["G605A", "A722G"], "aa_muts": {"SigPep": [], "HA1": ["G186D", "D225G"], "HA2": []}, "children": [{"xvalue": 0.01238, "tvalue": 3.19054, "clade": 27, "strain": "A/SouthAustralia/55/2014", "muts": ["A515G", "T606G", "A668G", "A849T"], "aa_muts": {"SigPep": [], "HA1": ["H156R", "D186E", "K207R"], "HA2": []}, "yvalue": 254.0, "attr": {"num_date_confidence": [2014.4900752908966, 2014.4900752908966], "region_confidence": {"oceania": 1.0}, "age_score": 0, "strain": "A/SouthAustralia/55/2014", "num_date": 2014.4900752908966, "lbi": 0.030808990907804024, "ep": 9, "region_entropy": -0.0, "ne": 3, "passage": "egg", "glyc": 11, "num_gender": 0, "rb": 3, "isolate_id": "EPI696967", "division": "south_australia", "avg_age": 32.88136288998358, "authors": "national_institute_for_biological_standards_and_control__nibsc_", "date": "2014-06-29", "gender": "?", "region": "oceania", "raw_date": "2014-06-29", "country": "australia", "div": 0.012376526332488234, "age": "unknown", "clade_membership": "3c3.A"}}, {"xvalue": 0.0112, "tvalue": 2.90306, "clade": 28, "strain": "A/Tasmania/11/2014", "muts": ["C49A", "A617G"], "aa_muts": {"SigPep": [], "HA1": ["Q1K", "D190G"], "HA2": []}, "yvalue": 253.0, "attr": {"num_date_confidence": [2014.2026009582478, 2014.2026009582478], "region_confidence": {"oceania": 1.0}, "age_score": 0, "strain": "A/Tasmania/11/2014", "num_date": 2014.2026009582478, "lbi": 0.06321188843392213, "ep": 8, "region_entropy": -0.0, "ne": 4, "passage": "egg", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI539691", "division": "tasmania", "avg_age": 32.88136288998358, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2014-03-16", "gender": "male", "region": "oceania", "raw_date": "2014-03-16", "country": "australia", "div": 0.011195937557155825, "age": 62, "clade_membership": "3c3.A"}}], "yvalue": 253.5, "attr": {"num_date": 2013.886521817842, "num_date_confidence": [2013.7825265214062, 2014.1031945780733], "region_confidence": {"oceania": 0.999628186276676}, "region": "oceania", "age_score": 0, "region_entropy": 0.0014461999426568905, "ne": 3, "glyc": 11, "num_gender": -0.5, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.1393084086557002, "div": 0.010018629032050263, "age": 62.0, "ep": 7, "clade_membership": "3c3.A"}}, {"xvalue": 0.00884, "tvalue": 3.63334, "clade": 29, "strain": "NODE_0000271", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.00943, "tvalue": 3.63411, "clade": 30, "strain": "NODE_0000251", "muts": ["G1513A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["D160N"]}, "children": [{"xvalue": 0.01238, "tvalue": 4.45611, "clade": 31, "strain": "A/Yunnan-Guandu/11110/2015", "muts": ["T60A", "T291C", "G1130T", "C1320T", "C1476T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["R32I"]}, "yvalue": 252.0, "attr": {"num_date_confidence": [2015.7556468172484, 2015.7556468172484], "region_confidence": {"china": 1.0}, "age_score": 0, "strain": "A/Yunnan-Guandu/11110/2015", "num_date": 2015.7556468172484, "lbi": 0.03816002096834221, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI697410", "division": "yunnan", "avg_age": 32.88136288998358, "authors": "who_chinese_national_influenza_center", "date": "2015-10-04", "gender": "female", "region": "china", "raw_date": "2015-10-04", "country": "china", "div": 0.012379458589799913, "age": 36, "clade_membership": "3c3.A"}}, {"xvalue": 0.0112, "tvalue": 4.00855, "clade": 32, "strain": "NODE_0000252", "muts": ["A26G", "T183C", "G765A"], "aa_muts": {"SigPep": ["Y9C"], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.45885, "clade": 33, "strain": "A/Peru/5790/2015", "muts": ["C55T", "G96A", "C135A", "A468G", "T517C", "G609A", "A651G", "C948T"], "aa_muts": {"SigPep": [], "HA1": ["L3F", "I140M"], "HA2": []}, "yvalue": 251.0, "attr": {"num_date_confidence": [2015.7583846680357, 2015.7583846680357], "region_confidence": {"south_america": 1.0}, "age_score": 0, "strain": "A/Peru/5790/2015", "num_date": 2015.7583846680357, "lbi": 0.07701533436799164, "ep": 7, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI675105", "division": "peru", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2015-10-05", "gender": "female", "region": "south_america", "raw_date": "2015-10-05", "country": "peru", "div": 0.015916815737195326, "age": 49, "clade_membership": "3c3.A"}}, {"xvalue": 0.01533, "tvalue": 4.81033, "clade": 34, "strain": "NODE_0000253", "muts": ["C55A", "G320A", "G375A", "T480A", "T626C", "C1149T", "T1639C"], "aa_muts": {"SigPep": [], "HA1": ["L3I", "S91N", "N144K", "F193S"], "HA2": []}, "children": [{"xvalue": 0.01709, "tvalue": 5.08924, "clade": 35, "strain": "A/Ecuador/1372/2016", "muts": ["G357A", "A560C", "G1200A"], "aa_muts": {"SigPep": [], "HA1": ["N171T"], "HA2": []}, "yvalue": 250.0, "attr": {"num_date_confidence": [2016.3887748117727, 2016.3887748117727], "region_confidence": {"south_america": 1.0}, "age_score": 0, "strain": "A/Ecuador/1372/2016", "num_date": 2016.3887748117727, "lbi": 0.09984976023110202, "ep": 10, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 10, "num_gender": -1, "rb": 3, "isolate_id": "EPI827346", "division": "ecuador", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2016-05-22", "gender": "male", "region": "south_america", "raw_date": "2016-05-22", "country": "ecuador", "div": 0.017094135799332718, "age": 61, "clade_membership": "3c3.A"}}, {"xvalue": 0.01592, "tvalue": 5.12982, "clade": 36, "strain": "NODE_0000254", "muts": ["G591T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0165, "tvalue": 5.23161, "clade": 37, "strain": "A/NewYork/84/2016", "muts": ["T903C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 249.0, "attr": {"num_date_confidence": [2016.5311430527036, 2016.5311430527036], "region_confidence": {"north_america": 1.0}, "age_score": 0, "strain": "A/NewYork/84/2016", "num_date": 2016.5311430527036, "lbi": 0.1496520146377938, "ep": 9, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 10, "num_gender": 0, "rb": 3, "isolate_id": "EPI827378", "division": "new_york", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2016-07-13", "gender": "?", "region": "north_america", "raw_date": "2016-07-13", "country": "usa", "div": 0.01650433735090265, "age": 18, "clade_membership": "3c3.A"}}, {"xvalue": 0.01709, "tvalue": 5.75852, "clade": 38, "strain": "NODE_0000255", "muts": ["A1242G", "A1485G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01827, "tvalue": 6.05365, "clade": 39, "strain": "A/Iowa/22/2017", "muts": ["T309C", "C915A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 248.0, "attr": {"num_date_confidence": [2017.35318275154, 2017.35318275154], "region_confidence": {"north_america": 1.0}, "age_score": 0, "strain": "A/Iowa/22/2017", "num_date": 2017.35318275154, "lbi": 0.10316197045640974, "ep": 9, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 10, "num_gender": 1, "rb": 3, "isolate_id": "EPI1016232", "division": "iowa", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2017-05-10", "gender": "female", "region": "north_america", "raw_date": "2017-05-10", "country": "usa", "div": 0.018270489890347737, "age": 20, "clade_membership": "3c3.A"}}, {"xvalue": 0.01709, "tvalue": 5.78807, "clade": 40, "strain": "A/SouthAustralia/26/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 247.0, "attr": {"num_date_confidence": [2017.0876112251883, 2017.0876112251883], "region_confidence": {"oceania": 1.0}, "age_score": 0, "strain": "A/SouthAustralia/26/2017", "num_date": 2017.0876112251883, "lbi": 0.14823566497418403, "ep": 9, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 10, "num_gender": -1, "rb": 3, "isolate_id": "EPI989655", "division": "south_australia", "avg_age": 32.88136288998358, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2017-02-02", "gender": "male", "region": "oceania", "raw_date": "2017-02-02", "country": "australia", "div": 0.017093175032486498, "age": "unknown", "clade_membership": "3c3.A"}}], "yvalue": 247.5, "attr": {"num_date": 2017.0580530779134, "num_date_confidence": [2016.7993578487471, 2017.0876112251883], "region_confidence": {"north_america": 0.9965945932838097}, "region": "north_america", "age_score": 0, "region_entropy": 0.009964556810523998, "ne": 6, "glyc": 10, "num_gender": 0.0, "avg_age": 32.88136288998358, "rb": 3, "lbi": 0.1590606951694413, "div": 0.01709317497958219, "age": 20.0, "ep": 9, "clade_membership": "3c3.A"}}], "yvalue": 248.25, "attr": {"num_date": 2016.4293545005162, "num_date_confidence": [2016.1860904476857, 2016.5200191531924], "region_confidence": {"north_america": 0.9988008175607449}, "region": "north_america", "age_score": 0, "region_entropy": 0.0043478913311247695, "ne": 6, "glyc": 10, "num_gender": 0.0, "avg_age": 32.88136288998358, "rb": 3, "lbi": 0.19301812125442863, "div": 0.015915893471902122, "age": 19.0, "ep": 9, "clade_membership": "3c3.A"}}], "yvalue": 249.125, "attr": {"num_date": 2016.1098681441015, "num_date_confidence": [2015.8688109816512, 2016.2541738156322], "region_confidence": {"south_america": 0.9974257397997223}, "region": "south_america", "age_score": 0, "region_entropy": 0.007998595805001243, "ne": 6, "glyc": 10, "num_gender": -0.25, "avg_age": 32.88136288998358, "rb": 3, "lbi": 0.20052387716201397, "div": 0.015327255452100088, "age": 33.0, "ep": 9, "clade_membership": "3c3.A"}}], "yvalue": 250.0625, "attr": {"num_date": 2015.3080842624324, "num_date_confidence": [2014.9121978558749, 2015.4262539489412], "region_confidence": {"south_america": 0.9973304470278498}, "region": "south_america", "age_score": 0, "region_entropy": 0.008731439661502588, "ne": 5, "glyc": 11, "num_gender": 0.0, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.23740215595674707, "div": 0.011196336457292719, "age": 37.0, "ep": 6, "clade_membership": "3c3.A"}}], "yvalue": 251.03125, "attr": {"num_date": 2014.933648908414, "num_date_confidence": [2014.3851916141064, 2015.2111919074116], "region_confidence": {"china": 0.9929089290451544}, "region": "china", "age_score": 0, "region_entropy": 0.02124982017365754, "ne": 4, "glyc": 11, "num_gender": 0.16666666666666666, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.2979075394771807, "div": 0.009429858584726957, "age": 36.8, "ep": 6, "clade_membership": "3c3.A"}}, {"xvalue": 0.00884, "tvalue": 3.64107, "clade": 41, "strain": "NODE_0000272", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01593, "tvalue": 5.85652, "clade": 42, "strain": "A/Henan-Shihe/1212/2017", "muts": ["C55A", "A121G", "A233G", "T291C", "T467C", "T475C", "T626C", "G813A", "A1030G", "C1031A", "C1347T", "G1525A"], "aa_muts": {"SigPep": [], "HA1": ["L3I", "I25V", "E62G", "I140T", "S143P", "F193S", "T328D"], "HA2": ["D164N"]}, "yvalue": 246.0, "attr": {"num_date_confidence": [2017.1560574948664, 2017.1560574948664], "region_confidence": {"china": 1.0}, "age_score": 0, "strain": "A/Henan-Shihe/1212/2017", "num_date": 2017.1560574948664, "lbi": 0.09992137254091471, "ep": 10, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 11, "num_gender": 0, "rb": 3, "isolate_id": "EPI1030345", "division": "henan", "avg_age": 32.88136288998358, "authors": "who_chinese_national_influenza_center", "date": "2017-02-27", "gender": "?", "region": "china", "raw_date": "2017-02-27", "country": "china", "div": 0.01593245422974225, "age": "unknown", "clade_membership": "3c3.A"}}, {"xvalue": 0.01002, "tvalue": 4.03653, "clade": 43, "strain": "NODE_0000256", "muts": ["T640C", "C1170T"], "aa_muts": {"SigPep": [], "HA1": ["S198P"], "HA2": []}, "children": [{"xvalue": 0.01593, "tvalue": 4.84831, "clade": 44, "strain": "A/Texas/88/2016", "muts": ["T42C", "A123G", "C393T", "T432C", "G482A", "T626C", "C866T", "T994C", "T1122A", "G1513A"], "aa_muts": {"SigPep": [], "HA1": ["I25M", "S145N", "F193S", "P273L"], "HA2": ["D160N"]}, "yvalue": 245.0, "attr": {"num_date_confidence": [2016.1478439425052, 2016.1478439425052], "region_confidence": {"north_america": 1.0}, "age_score": 0, "strain": "A/Texas/88/2016", "num_date": 2016.1478439425052, "lbi": 0.014481912880648637, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI752312", "division": "texas", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2016-02-24", "gender": "male", "region": "north_america", "raw_date": "2016-02-24", "country": "usa", "div": 0.01592517025425432, "age": 9, "clade_membership": "3c3.A"}}, {"xvalue": 0.01002, "tvalue": 4.11004, "clade": 45, "strain": "NODE_0000273", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01002, "tvalue": 4.25726, "clade": 46, "strain": "NODE_0000274", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01179, "tvalue": 4.85104, "clade": 47, "strain": "A/Kyoto-C/8/2016", "muts": ["C45T", "G1572A", "G1647A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 244.0, "attr": {"num_date_confidence": [2016.1505817932923, 2016.1505817932923], "region_confidence": {"japan_korea": 1.0}, "age_score": 0, "strain": "A/Kyoto-C/8/2016", "num_date": 2016.1505817932923, "lbi": 0.01438312804753182, "ep": 7, "region_entropy": -0.0, "ne": 3, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI777999", "division": "kyoto", "avg_age": 32.88136288998358, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-02-25", "gender": "female", "region": "japan_korea", "raw_date": "2016-02-25", "country": "japan", "div": 0.011785329899077705, "age": 32, "clade_membership": "3c3.A"}}, {"xvalue": 0.01179, "tvalue": 4.82367, "clade": 48, "strain": "A/Copiapo/13634/2016", "muts": ["A233G", "G609T", "C1047A"], "aa_muts": {"SigPep": [], "HA1": ["E62G"], "HA2": []}, "yvalue": 243.0, "attr": {"num_date_confidence": [2016.123203285421, 2016.123203285421], "region_confidence": {"south_america": 1.0}, "age_score": 0, "strain": "A/Copiapo/13634/2016", "num_date": 2016.123203285421, "lbi": 0.015402073234271871, "ep": 8, "region_entropy": -0.0, "ne": 3, "passage": "undetermined", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI823723", "division": "atacama", "avg_age": 32.88136288998358, "authors": "instituto_de_salud_publica_de_chile", "date": "2016-02-15", "gender": "female", "region": "south_america", "raw_date": "2016-02-15", "country": "chile", "div": 0.011786060303470406, "age": 49, "clade_membership": "3c3.A"}}], "yvalue": 243.5, "attr": {"num_date": 2015.556795689917, "num_date_confidence": [2015.3528277328867, 2015.8460674167486], "region_confidence": {"japan_korea": 0.16418753463978078, "south_america": 0.17340625113857122, "north_america": 0.6620111036622005}, "region": "north_america", "age_score": 0, "region_entropy": 0.38100034221792967, "ne": 3, "glyc": 11, "num_gender": 1.0, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.06346706530403122, "div": 0.010018641105074711, "age": 40.5, "ep": 7, "clade_membership": "3c3.A"}}, {"xvalue": 0.0112, "tvalue": 4.40802, "clade": 49, "strain": "NODE_0000259", "muts": ["C282A", "G983A"], "aa_muts": {"SigPep": [], "HA1": ["S312N"], "HA2": []}, "children": [{"xvalue": 0.01532, "tvalue": 4.99341, "clade": 50, "strain": "A/California/110/2016", "muts": ["T213C", "A246G", "C522T", "C531T", "C543T", "G1056A", "A1518G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 242.0, "attr": {"num_date_confidence": [2016.2929500342232, 2016.2929500342232], "region_confidence": {"north_america": 1.0}, "age_score": 0, "strain": "A/California/110/2016", "num_date": 2016.2929500342232, "lbi": 0.010075787352943627, "ep": 8, "region_entropy": -0.0, "ne": 3, "passage": "unpassaged", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI775856", "division": "california", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2016-04-17", "gender": "male", "region": "north_america", "raw_date": "2016-04-17", "country": "usa", "div": 0.015324922664766476, "age": 70, "clade_membership": "3c3.A"}}, {"xvalue": 0.01237, "tvalue": 4.87295, "clade": 51, "strain": "NODE_0000260", "muts": ["A702G", "C954T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01414, "tvalue": 5.48075, "clade": 52, "strain": "A/Roraima/144096-IEC/2016", "muts": ["T414C", "A540G", "A638G"], "aa_muts": {"SigPep": [], "HA1": ["Q197R"], "HA2": []}, "yvalue": 241.0, "attr": {"num_date_confidence": [2016.7802874743327, 2016.7802874743327], "region_confidence": {"south_america": 1.0}, "age_score": 0, "strain": "A/Roraima/144096-IEC/2016", "num_date": 2016.7802874743327, "lbi": 0.0029796077182497435, "ep": 9, "region_entropy": -0.0, "ne": 3, "passage": "unpassaged", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI910627", "division": "roraima", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2016-10-12", "gender": "female", "region": "south_america", "raw_date": "2016-10-12", "country": "brazil", "div": 0.014139837948020338, "age": "unknown", "clade_membership": "3c3.A"}}, {"xvalue": 0.01237, "tvalue": 4.87295, "clade": 53, "strain": "A/Nevada/22/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 240.0, "attr": {"num_date_confidence": [2016.1724845995893, 2016.1724845995893], "region_confidence": {"north_america": 1.0}, "age_score": 0, "strain": "A/Nevada/22/2016", "num_date": 2016.1724845995893, "lbi": 0.013616725326051913, "ep": 8, "region_entropy": -0.0, "ne": 3, "passage": "unpassaged", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI747840", "division": "nevada", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2016-03-04", "gender": "female", "region": "north_america", "raw_date": "2016-03-04", "country": "usa", "div": 0.012373413008271767, "age": 23, "clade_membership": "3c3.A"}}], "yvalue": 240.5, "attr": {"num_date": 2016.1724845995893, "num_date_confidence": [2015.9623170479274, 2016.1724845995893], "region_confidence": {"north_america": 0.9999999496142798}, "region": "north_america", "age_score": 0, "region_entropy": 3.899439648355672e-07, "ne": 3, "glyc": 11, "num_gender": 1.0, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.013616725326051913, "div": 0.012373412955367457, "age": 23.0, "ep": 8, "clade_membership": "3c3.A"}}, {"xvalue": 0.01355, "tvalue": 4.70905, "clade": 54, "strain": "NODE_0000262", "muts": ["G180A", "T345C", "C637A", "A717C"], "aa_muts": {"SigPep": [], "HA1": ["Q197K"], "HA2": []}, "children": [{"xvalue": 0.01532, "tvalue": 5.13304, "clade": 55, "strain": "A/Idaho/33/2016", "muts": ["T308A", "A479G", "C1627A"], "aa_muts": {"SigPep": [], "HA1": ["F87Y", "N144S"], "HA2": ["L198I"]}, "yvalue": 239.0, "attr": {"num_date_confidence": [2016.432580424367, 2016.432580424367], "region_confidence": {"north_america": 1.0}, "age_score": 0, "strain": "A/Idaho/33/2016", "num_date": 2016.432580424367, "lbi": 0.00710685121473969, "ep": 11, "region_entropy": -0.0, "ne": 4, "passage": "egg", "glyc": 10, "num_gender": -1, "rb": 2, "isolate_id": "EPI814081", "division": "idaho", "avg_age": 32.88136288998358, "authors": "centers_for_disease_control_and_prevention", "date": "2016-06-07", "gender": "male", "region": "north_america", "raw_date": "2016-06-07", "country": "usa", "div": 0.015321025241754428, "age": 48, "clade_membership": "3c3.A"}}, {"xvalue": 0.01532, "tvalue": 4.93024, "clade": 56, "strain": "NODE_0000263", "muts": ["T159C", "A323G", "A687G"], "aa_muts": {"SigPep": [], "HA1": ["K92R"], "HA2": []}, "children": [{"xvalue": 0.01591, "tvalue": 5.0646, "clade": 57, "strain": "A/Norway/3545/2016", "muts": ["A234G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 238.0, "attr": {"num_date_confidence": [2016.3641341546886, 2016.3641341546886], "region_confidence": {"europe": 1.0}, "age_score": 0, "strain": "A/Norway/3545/2016", "num_date": 2016.3641341546886, "lbi": 0.008433188666862245, "ep": 10, "region_entropy": -0.0, "ne": 3, "passage": "unpassaged", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI773579", "division": "norway", "avg_age": 32.88136288998358, "authors": "norwegian_institute_of_public_health", "date": "2016-05-13", "gender": "female", "region": "europe", "raw_date": "2016-05-13", "country": "norway", "div": 0.015907810979822648, "age": 19, "clade_membership": "3c3.A"}}, {"xvalue": 0.0165, "tvalue": 5.12209, "clade": 58, "strain": "A/Christchurch/3/2016", "muts": ["C345T", "C1637T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["A201V"]}, "yvalue": 237.0, "attr": {"num_date_confidence": [2016.4216290212185, 2016.4216290212185], "region_confidence": {"oceania": 1.0}, "age_score": 0, "strain": "A/Christchurch/3/2016", "num_date": 2016.4216290212185, "lbi": 0.0073041142586360705, "ep": 10, "region_entropy": -0.0, "ne": 4, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI831705", "division": "canterbury", "avg_age": 32.88136288998358, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-06-03", "gender": "male", "region": "oceania", "raw_date": "2016-06-03", "country": "new_zealand", "div": 0.016496681005661894, "age": "unknown", "clade_membership": "3c3.A"}}], "yvalue": 237.5, "attr": {"num_date": 2016.2297814422495, "num_date_confidence": [2016.0977234302243, 2016.3408438585668], "region_confidence": {"europe": 0.433316192626371, "oceania": 0.3034300129171224, "north_america": 0.26310551978954605}, "region": "europe", "age_score": 0, "region_entropy": 0.46779734396864536, "ne": 3, "glyc": 11, "num_gender": 0.0, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.01179949499933032, "div": 0.015319598402999225, "age": 19.0, "ep": 10, "clade_membership": "3c3.A"}}], "yvalue": 238.25, "attr": {"num_date": 2016.0085866138193, "num_date_confidence": [2015.8118063362667, 2016.1476259366434], "region_confidence": {"north_america": 0.9998451410200887}, "region": "north_america", "age_score": 0, "region_entropy": 0.0007033248379029067, "ne": 3, "glyc": 11, "num_gender": -0.3333333333333333, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.02051269176299461, "div": 0.013553243489820139, "age": 33.5, "ep": 9, "clade_membership": "3c3.A"}}], "yvalue": 240.25, "attr": {"num_date": 2015.7075596395077, "num_date_confidence": [2015.4322488525665, 2015.8432850667416], "region_confidence": {"north_america": 0.9999999992679501}, "region": "north_america", "age_score": 0, "region_entropy": 7.292195221583017e-09, "ne": 3, "glyc": 11, "num_gender": 0.0, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.043537003895246035, "div": 0.011196066789311109, "age": 40.0, "ep": 8, "clade_membership": "3c3.A"}}], "yvalue": 241.875, "attr": {"num_date": 2015.4095781415476, "num_date_confidence": [2015.2179426123691, 2015.6306161782195], "region_confidence": {"north_america": 0.9982467248616818}, "region": "north_america", "age_score": 0, "region_entropy": 0.0060714249153061405, "ne": 3, "glyc": 11, "num_gender": 0.25, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.0917039070883924, "div": 0.010018641052170402, "age": 40.166666666666664, "ep": 7, "clade_membership": "3c3.A"}}], "yvalue": 243.4375, "attr": {"num_date": 2015.336066016528, "num_date_confidence": [2015.0414900966937, 2015.5051474738561], "region_confidence": {"north_america": 0.9982102324814922}, "region": "north_america", "age_score": 0, "region_entropy": 0.006212228299393922, "ne": 3, "glyc": 11, "num_gender": 0.1111111111111111, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.11020533397148417, "div": 0.010018640999266092, "age": 35.714285714285715, "ep": 7, "clade_membership": "3c3.A"}}], "yvalue": 244.71875, "attr": {"num_date": 2014.9406038054549, "num_date_confidence": [2014.3936576391548, 2015.3037501735691], "region_confidence": {"china": 0.9928998618387271}, "region": "china", "age_score": 0, "region_entropy": 0.021258830001284684, "ne": 3, "glyc": 11, "num_gender": 0.1, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.296189906873153, "div": 0.008841476678971474, "age": 35.714285714285715, "ep": 6, "clade_membership": "3c3.A"}}], "yvalue": 247.875, "attr": {"num_date": 2014.932874321679, "num_date_confidence": [2014.1248259768954, 2015.075684241658], "region_confidence": {"china": 0.9929074392152798}, "region": "china", "age_score": 0, "region_entropy": 0.02125494914396087, "ne": 3, "glyc": 11, "num_gender": 0.125, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.298099883388452, "div": 0.008841476626067164, "age": 36.166666666666664, "ep": 6, "clade_membership": "3c3.A"}}], "yvalue": 252.125, "attr": {"num_date": 2013.7312499042914, "num_date_confidence": [2013.623878792727, 2013.8297094470006], "region_confidence": {"europe": 0.8235228246610058, "oceania": 0.16902334577319839}, "region": "europe", "age_score": 0, "region_entropy": 0.21716512993758036, "ne": 3, "glyc": 11, "num_gender": 0.10526315789473684, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.2053816645531423, "div": 0.008841476573162855, "age": 38.15384615384615, "ep": 6, "clade_membership": "3c3.A"}}], "yvalue": 256.57031, "attr": {"num_date": 2013.5666879367218, "num_date_confidence": [2013.5171116064575, 2013.7486701972218], "region_confidence": {"europe": 0.8181635146412615, "west_asia": 0.019650654317335606, "oceania": 0.16209812494473622}, "region": "europe", "age_score": 0, "region_entropy": 0.23333313489767993, "ne": 2, "clade_annotation": "3c3.A", "glyc": 11, "num_gender": -0.038461538461538464, "avg_age": 32.88136288998358, "rb": 2, "lbi": 0.20443872650901693, "div": 0.008253094485598533, "age": 40.31578947368421, "ep": 6, "clade_membership": "3c3.A"}}], "yvalue": 259.78516, "attr": {"num_date": 2012.6383048782204, "num_date_confidence": [2012.4392712716885, 2012.9295886094046], "region_confidence": {"europe": 0.17011266076719675, "west_asia": 0.3848565765635051, "oceania": 0.4138140399513278, "north_america": 0.030832055015967627}, "region": "oceania", "age_score": 0, "region_entropy": 0.4972314700837835, "ne": 1, "clade_annotation": "3c3", "glyc": 11, "num_gender": 0.0, "avg_age": 32.88136288998358, "rb": 1, "lbi": 0.22089655148091114, "div": 0.004712388485330159, "age": 40.31578947368421, "ep": 4, "clade_membership": "3c3"}}, {"xvalue": 0.0053, "tvalue": 1.42964, "clade": 59, "strain": "NODE_0000233", "muts": ["G693A", "C1491A", "G1513A", "A1518G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["D160N"]}, "children": [{"xvalue": 0.00707, "tvalue": 2.15495, "clade": 60, "strain": "A/Victoria/506/2013", "muts": ["C942T", "C966A", "C1170A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 236.0, "attr": {"num_date_confidence": [2013.454483230664, 2013.454483230664], "region_confidence": {"oceania": 1.0}, "age_score": 1.6358656620887428, "strain": "A/Victoria/506/2013", "num_date": 2013.454483230664, "lbi": 0.03651288444832569, "ep": 2, "region_entropy": -0.0, "ne": 2, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 1, "isolate_id": "EPI526675", "division": "victoria", "avg_age": 32.11367753623188, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2013-06-16", "gender": "male", "region": "oceania", "raw_date": "2013-06-16", "country": "australia", "div": 0.0070705086504895195, "age": "unknown", "clade_membership": "3c"}}, {"xvalue": 0.00885, "tvalue": 2.34388, "clade": 61, "strain": "NODE_0000232", "muts": ["C55A", "A479G", "T524A", "A721G", "A981T", "G1260A"], "aa_muts": {"SigPep": [], "HA1": ["L3I", "N144S", "F159Y", "N225D", "Q311H"], "HA2": []}, "children": [{"xvalue": 0.01061, "tvalue": 2.85378, "clade": 62, "strain": "A/HongKong/4801/2014", "muts": ["A335G", "T467A", "T629C"], "aa_muts": {"SigPep": [], "HA1": ["N96S", "I140K", "L194P"], "HA2": []}, "yvalue": 235.0, "attr": {"num_date_confidence": [2014.1533196440794, 2014.1533196440794], "region_confidence": {"china": 1.0}, "age_score": 1.6358656620887428, "strain": "A/HongKong/4801/2014", "num_date": 2014.1533196440794, "lbi": 0.07789077230559109, "ep": 8, "region_entropy": -0.0, "ne": 4, "passage": "egg", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI731467", "division": "hong_kong", "avg_age": 32.11367753623188, "authors": "national_institute_for_biological_standards_and_control__nibsc_", "date": "2014-02-26", "gender": "female", "region": "china", "raw_date": "2014-02-26", "country": "hong_kong", "div": 0.010613960164800817, "age": 66, "clade_membership": "3c2.A"}}, {"xvalue": 0.00943, "tvalue": 2.62142, "clade": 63, "strain": "NODE_0000225", "muts": ["A527C"], "aa_muts": {"SigPep": [], "HA1": ["K160T"], "HA2": []}, "children": [{"xvalue": 0.01475, "tvalue": 5.21204, "clade": 64, "strain": "NODE_0000226", "muts": ["A140G", "G205A", "T270C", "A472G", "A478C", "T561A", "T623C", "A639T", "G1557A"], "aa_muts": {"SigPep": [], "HA1": ["N31S", "D53N", "R142G", "S144R", "N171K", "I192T", "Q197H"], "HA2": []}, "children": [{"xvalue": 0.01534, "tvalue": 5.89211, "clade": 65, "strain": "NODE_0000227", "muts": ["C369T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01534, "tvalue": 5.89211, "clade": 66, "strain": "A/Bangladesh/2016/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 234.0, "attr": {"num_date_confidence": [2017.1916495550993, 2017.1916495550993], "region_confidence": {"south_asia": 1.0}, "age_score": 1.765670027384973, "strain": "A/Bangladesh/2016/2017", "num_date": 2017.1916495550993, "lbi": 0.16403937997849513, "ep": 10, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1017104", "division": "bangladesh", "avg_age": 31.928506375227684, "authors": "centers_for_disease_control_and_prevention", "date": "2017-03-12", "gender": "male", "region": "south_asia", "raw_date": "2017-03-12", "country": "bangladesh", "div": 0.015343396191622663, "age": 16, "clade_membership": "A4"}}, {"xvalue": 0.01534, "tvalue": 6.03722, "clade": 67, "strain": "A/Bangladesh/2006/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 233.0, "attr": {"num_date_confidence": [2017.3367556468172, 2017.3367556468172], "region_confidence": {"south_asia": 1.0}, "age_score": 1.765670027384973, "strain": "A/Bangladesh/2006/2017", "num_date": 2017.3367556468172, "lbi": 0.12334441244830052, "ep": 10, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1056960", "division": "bangladesh", "avg_age": 31.928506375227684, "authors": "centers_for_disease_control_and_prevention", "date": "2017-05-04", "gender": "female", "region": "south_asia", "raw_date": "2017-05-04", "country": "bangladesh", "div": 0.015343396191622663, "age": 2, "clade_membership": "A4"}}], "yvalue": 233.5, "attr": {"num_date": 2017.1916495550993, "num_date_confidence": [2016.9329762189234, 2017.1916495550993], "region_confidence": {"south_asia": 0.9999999896465077}, "region": "south_asia", "age_score": 1.765670027384973, "region_entropy": 8.932614440802147e-08, "ne": 6, "glyc": 12, "num_gender": 0.0, "avg_age": 31.928506375227684, "rb": 2, "lbi": 0.16403937997849513, "div": 0.015343396138718353, "age": 9.0, "ep": 10, "clade_membership": "A4"}}, {"xvalue": 0.01593, "tvalue": 5.47867, "clade": 68, "strain": "NODE_0000228", "muts": ["G780A", "G1080A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01947, "tvalue": 6.12483, "clade": 69, "strain": "A/Niigata/509/2017", "muts": ["C237T", "G836A", "T936C", "G1341A", "T1446C", "A1557G"], "aa_muts": {"SigPep": [], "HA1": ["G263E"], "HA2": []}, "yvalue": 232.0, "attr": {"num_date_confidence": [2017.4243668720055, 2017.4243668720055], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.765670027384973, "strain": "A/Niigata/509/2017", "num_date": 2017.4243668720055, "lbi": 0.14626673927643993, "ep": 10, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1043604", "division": "niigata", "avg_age": 31.928506375227684, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2017-06-05", "gender": "male", "region": "japan_korea", "raw_date": "2017-06-05", "country": "japan", "div": 0.019470935203876, "age": 6, "clade_membership": "A4"}}, {"xvalue": 0.01888, "tvalue": 5.88116, "clade": 70, "strain": "A/Brisbane/29/2017", "muts": ["C8T", "A63G", "C527A", "T585C", "T629C"], "aa_muts": {"SigPep": ["T3I"], "HA1": ["T160K", "L194P"], "HA2": []}, "yvalue": 231.0, "attr": {"num_date_confidence": [2017.1806981519508, 2017.1806981519508], "region_confidence": {"oceania": 1.0}, "age_score": 1.765670027384973, "strain": "A/Brisbane/29/2017", "num_date": 2017.1806981519508, "lbi": 0.19153712195640285, "ep": 11, "region_entropy": -0.0, "ne": 6, "passage": "egg", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1048347", "division": "queensland", "avg_age": 31.928506375227684, "authors": "centers_for_disease_control_and_prevention", "date": "2017-03-08", "gender": "male", "region": "oceania", "raw_date": "2017-03-08", "country": "australia", "div": 0.018880309375851206, "age": "unknown", "clade_membership": "A4"}}, {"xvalue": 0.01652, "tvalue": 5.66233, "clade": 71, "strain": "NODE_0000230", "muts": ["G1633A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["V200I"]}, "children": [{"xvalue": 0.01888, "tvalue": 6.1659, "clade": 72, "strain": "A/Guangdong-Yuncheng/1964/2017", "muts": ["G232A", "C527A", "G1188T", "G1516A"], "aa_muts": {"SigPep": [], "HA1": ["E62K", "T160K"], "HA2": ["K51N", "V161M"]}, "yvalue": 230.0, "attr": {"num_date_confidence": [2017.4654346338125, 2017.4654346338125], "region_confidence": {"china": 1.0}, "age_score": 1.765670027384973, "strain": "A/Guangdong-Yuncheng/1964/2017", "num_date": 2017.4654346338125, "lbi": 0.15364068304519943, "ep": 11, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1062535", "division": "guangdong", "avg_age": 31.928506375227684, "authors": "who_chinese_national_influenza_center", "date": "2017-06-20", "gender": "female", "region": "china", "raw_date": "2017-06-20", "country": "china", "div": 0.018880240238290213, "age": 4, "clade_membership": "A4"}}, {"xvalue": 0.01652, "tvalue": 5.7573, "clade": 73, "strain": "NODE_0000275", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01711, "tvalue": 5.97425, "clade": 74, "strain": "A/Kagawa/238/2017", "muts": ["G765A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 229.0, "attr": {"num_date_confidence": [2017.2737850787132, 2017.2737850787132], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.765670027384973, "strain": "A/Kagawa/238/2017", "num_date": 2017.2737850787132, "lbi": 0.199898713536539, "ep": 10, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1037918", "division": "kagawa", "avg_age": 31.928506375227684, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2017-04-11", "gender": "female", "region": "japan_korea", "raw_date": "2017-04-11", "country": "japan", "div": 0.01710980685001922, "age": "unknown", "clade_membership": "A4"}}, {"xvalue": 0.01711, "tvalue": 5.862, "clade": 75, "strain": "A/Kanagawa/176/2017", "muts": ["G609A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 228.0, "attr": {"num_date_confidence": [2017.1615331964408, 2017.1615331964408], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.765670027384973, "strain": "A/Kanagawa/176/2017", "num_date": 2017.1615331964408, "lbi": 0.2468417497810553, "ep": 10, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1055128", "division": "kanagawa", "avg_age": 31.928506375227684, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2017-03-01", "gender": "male", "region": "japan_korea", "raw_date": "2017-03-01", "country": "japan", "div": 0.01710980685001922, "age": 47, "clade_membership": "A4"}}], "yvalue": 228.5, "attr": {"num_date": 2017.0568360882608, "num_date_confidence": [2016.8830498638647, 2017.1419170652143], "region_confidence": {"japan_korea": 0.9999990423547473}, "region": "japan_korea", "age_score": 1.765670027384973, "region_entropy": 6.4690466998283e-06, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 31.928506375227684, "rb": 2, "lbi": 0.31383660585331447, "div": 0.01652109066971814, "age": 47.0, "ep": 10, "clade_membership": "A4"}}], "yvalue": 229.25, "attr": {"num_date": 2016.9618669192314, "num_date_confidence": [2016.7552380829934, 2017.0714974789898], "region_confidence": {"japan_korea": 0.9889988965498686}, "region": "japan_korea", "age_score": 1.765670027384973, "region_entropy": 0.029610983785152152, "ne": 7, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 31.928506375227684, "rb": 2, "lbi": 0.3613398730164278, "div": 0.01652109061681383, "age": 25.5, "ep": 10, "clade_membership": "A4"}}], "yvalue": 230.75, "attr": {"num_date": 2016.778203292734, "num_date_confidence": [2016.5103810157411, 2016.874225431896], "region_confidence": {"japan_korea": 0.9803163007838017, "oceania": 0.01474492207853485}, "region": "japan_korea", "age_score": 1.765670027384973, "region_entropy": 0.04705846445346602, "ne": 6, "glyc": 12, "num_gender": -0.2, "avg_age": 31.928506375227684, "rb": 2, "lbi": 0.414329904858221, "div": 0.01593243296496991, "age": 19.0, "ep": 10, "clade_membership": "A4"}}], "yvalue": 232.125, "attr": {"num_date": 2016.5115807281002, "num_date_confidence": [2016.102542013149, 2016.7297674360818], "region_confidence": {"japan_korea": 0.6582463666024689, "oceania": 0.022471879376538342, "north_america": 0.045488883462799896, "south_asia": 0.25804186035284626}, "region": "japan_korea", "age_score": 1.765670027384973, "region_entropy": 0.3987442737254276, "ne": 6, "clade_annotation": "A4", "glyc": 12, "num_gender": -0.14285714285714285, "avg_age": 31.928506375227684, "rb": 2, "lbi": 0.37376058444285215, "div": 0.014754847102888366, "age": 15.0, "ep": 10, "clade_membership": "A4"}}, {"xvalue": 0.01002, "tvalue": 2.87182, "clade": 76, "strain": "NODE_0000224", "muts": ["C1437A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01002, "tvalue": 3.24256, "clade": 77, "strain": "A/Hawaii/47/2014", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 227.0, "attr": {"num_date_confidence": [2014.542094455852, 2014.542094455852], "region_confidence": {"north_america": 1.0}, "age_score": 0.5647645663390012, "strain": "A/Hawaii/47/2014", "num_date": 2014.542094455852, "lbi": 0.1416122038888063, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI549053", "division": "hawaii", "avg_age": 32.40402621722846, "authors": "centers_for_disease_control_and_prevention", "date": "2014-07-18", "gender": "female", "region": "north_america", "raw_date": "2014-07-18", "country": "usa", "div": 0.010023328597438916, "age": 75, "clade_membership": "3c2.A"}}, {"xvalue": 0.01061, "tvalue": 2.90884, "clade": 78, "strain": "NODE_0000220", "muts": ["G138A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 4.10836, "clade": 79, "strain": "NODE_0000160", "muts": ["T18C", "T561G", "T606C", "A639G", "A1083G", "A1485G", "G1683A"], "aa_muts": {"SigPep": [], "HA1": ["N171K"], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 4.34933, "clade": 80, "strain": "A/Mali/187CIV/2015", "muts": ["T963C", "G1087A", "A1591G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["V18M", "I186V"]}, "yvalue": 226.0, "attr": {"num_date_confidence": [2015.6488706365503, 2015.6488706365503], "region_confidence": {"africa": 1.0}, "age_score": 0.6561092327639302, "strain": "A/Mali/187CIV/2015", "num_date": 2015.6488706365503, "lbi": 0.009911804931324172, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI688629", "division": "mali", "avg_age": 32.16337099811676, "authors": "centers_for_disease_control_and_prevention", "date": "2015-08-26", "gender": "female", "region": "africa", "raw_date": "2015-08-26", "country": "mali", "div": 0.016509619274839578, "age": 4, "clade_membership": "3c2.A"}}, {"xvalue": 0.01474, "tvalue": 4.48075, "clade": 81, "strain": "A/Mali/219CH/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 225.0, "attr": {"num_date_confidence": [2015.7802874743327, 2015.7802874743327], "region_confidence": {"africa": 1.0}, "age_score": 0.6561092327639302, "strain": "A/Mali/219CH/2015", "num_date": 2015.7802874743327, "lbi": 0.007136228172591961, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI698378", "division": "mali", "avg_age": 32.16337099811676, "authors": "centers_for_disease_control_and_prevention", "date": "2015-10-13", "gender": "female", "region": "africa", "raw_date": "2015-10-13", "country": "mali", "div": 0.014743140750760367, "age": 2, "clade_membership": "3c2.A"}}], "yvalue": 225.5, "attr": {"num_date": 2015.4079019253813, "num_date_confidence": [2015.2385419493476, 2015.5725864966703], "region_confidence": {"africa": 0.9999727157907371}, "region": "africa", "age_score": 0.6561092327639302, "region_entropy": 0.0001385147320617151, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 32.16337099811676, "rb": 2, "lbi": 0.018104277602933143, "div": 0.014743140697856058, "age": 3.0, "ep": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.0112, "tvalue": 2.98669, "clade": 82, "strain": "NODE_0000221", "muts": ["C527A"], "aa_muts": {"SigPep": [], "HA1": ["T160K"], "HA2": []}, "children": [{"xvalue": 0.01238, "tvalue": 3.11308, "clade": 83, "strain": "NODE_0000223", "muts": ["T629C", "A722G"], "aa_muts": {"SigPep": [], "HA1": ["L194P", "D225G"], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 3.27267, "clade": 84, "strain": "A/HongKong/7127/2014", "muts": ["C172T", "A1197G", "G1671A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 224.0, "attr": {"num_date_confidence": [2014.5722108145105, 2014.5722108145105], "region_confidence": {"china": 1.0}, "age_score": 0.6561092327639302, "strain": "A/HongKong/7127/2014", "num_date": 2014.5722108145105, "lbi": 0.14625856071183474, "ep": 6, "region_entropy": -0.0, "ne": 4, "passage": "egg", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI743790", "division": "hong_kong", "avg_age": 32.16337099811676, "authors": "national_institute_for_biological_standards_and_control__nibsc_", "date": "2014-07-29", "gender": "male", "region": "china", "raw_date": "2014-07-29", "country": "hong_kong", "div": 0.014146329050404076, "age": 3, "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 3.31374, "clade": 85, "strain": "A/NewCaledonia/71/2014", "muts": ["G74A", "G1484A"], "aa_muts": {"SigPep": [], "HA1": ["S9N"], "HA2": ["G150E"]}, "yvalue": 223.0, "attr": {"num_date_confidence": [2014.6132785763175, 2014.6132785763175], "region_confidence": {"oceania": 1.0}, "age_score": 0.6561092327639302, "strain": "A/NewCaledonia/71/2014", "num_date": 2014.6132785763175, "lbi": 0.1319874199536427, "ep": 6, "region_entropy": -0.0, "ne": 6, "passage": "egg", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI746473", "division": "new_caledonia", "avg_age": 32.16337099811676, "authors": "national_institute_for_biological_standards_and_control__nibsc_", "date": "2014-08-13", "gender": "male", "region": "oceania", "raw_date": "2014-08-13", "country": "new_caledonia", "div": 0.013556767662088657, "age": 21, "clade_membership": "3c2.A"}}], "yvalue": 223.5, "attr": {"num_date": 2014.4126217525657, "num_date_confidence": [2014.3044605128002, 2014.4966704719084], "region_confidence": {"oceania": 0.2830814324020422, "china": 0.31780924075758243, "north_america": 0.39897772706154133}, "region": "north_america", "age_score": 0.6561092327639302, "region_entropy": 0.4732042158399331, "ne": 4, "glyc": 11, "num_gender": -1.0, "avg_age": 32.16337099811676, "rb": 2, "lbi": 0.21796808958903416, "div": 0.012378864562543607, "age": 12.0, "ep": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.0112, "tvalue": 3.07787, "clade": 86, "strain": "NODE_0000276", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01238, "tvalue": 3.42873, "clade": 87, "strain": "A/Michigan/15/2014", "muts": ["G713A", "C829A"], "aa_muts": {"SigPep": [], "HA1": ["R222K"], "HA2": []}, "yvalue": 222.0, "attr": {"num_date_confidence": [2014.7282683093772, 2014.7282683093772], "region_confidence": {"north_america": 1.0}, "age_score": 0.6561092327639302, "strain": "A/Michigan/15/2014", "num_date": 2014.7282683093772, "lbi": 0.09901113138180767, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI841441", "division": "michigan", "avg_age": 32.16337099811676, "authors": "centers_for_disease_control_and_prevention", "date": "2014-09-24", "gender": "female", "region": "north_america", "raw_date": "2014-09-24", "country": "usa", "div": 0.012379261723220673, "age": 84, "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 4.38219, "clade": 88, "strain": "A/Lao/I924/2015", "muts": ["G87A", "T467G", "G833A", "G1087A"], "aa_muts": {"SigPep": [], "HA1": ["I140R", "S262N"], "HA2": ["V18M"]}, "yvalue": 221.0, "attr": {"num_date_confidence": [2015.6817248459959, 2015.6817248459959], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.6561092327639302, "strain": "A/Lao/I924/2015", "num_date": 2015.6817248459959, "lbi": 0.009130230497615362, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI674512", "division": "laos", "avg_age": 32.16337099811676, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-09-07", "gender": "male", "region": "southeast_asia", "raw_date": "2015-09-07", "country": "laos", "div": 0.013559828763946954, "age": 23, "clade_membership": "3c2.A"}}], "yvalue": 221.5, "attr": {"num_date": 2014.3774097173011, "num_date_confidence": [2014.2441231284727, 2014.5876037218168], "region_confidence": {"oceania": 0.02391030779238521, "north_america": 0.9729218691540905}, "region": "north_america", "age_score": 0.6561092327639302, "region_entropy": 0.05924635668057179, "ne": 4, "glyc": 11, "num_gender": 0.0, "avg_age": 32.16337099811676, "rb": 2, "lbi": 0.23802572646111456, "div": 0.01120094383031938, "age": 53.5, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 222.5, "attr": {"num_date": 2014.286229740257, "num_date_confidence": [2014.200874414949, 2014.3924220859749], "region_confidence": {"oceania": 0.031795712879178706, "north_america": 0.9663604298909795}, "region": "north_america", "age_score": 0.6561092327639302, "region_entropy": 0.06704252399223981, "ne": 4, "glyc": 11, "num_gender": -0.5, "avg_age": 32.16337099811676, "rb": 2, "lbi": 0.2989656562681709, "div": 0.011200943777415071, "age": 32.75, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01061, "tvalue": 2.98783, "clade": 89, "strain": "NODE_0000358", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01061, "tvalue": 3.32468, "clade": 90, "strain": "NODE_0000277", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0112, "tvalue": 3.63354, "clade": 91, "strain": "NODE_0000163", "muts": ["A638G"], "aa_muts": {"SigPep": [], "HA1": ["Q197R"], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 4.03838, "clade": 92, "strain": "NODE_0000164", "muts": ["G84A", "C396A", "C675T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 4.22887, "clade": 93, "strain": "A/SouthAfrica/4120/2015", "muts": ["A660G", "A927G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 220.0, "attr": {"num_date_confidence": [2015.5284052019165, 2015.5284052019165], "region_confidence": {"africa": 1.0}, "age_score": 1.032799050654641, "strain": "A/SouthAfrica/4120/2015", "num_date": 2015.5284052019165, "lbi": 0.029176662676372433, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI712480", "division": "south_africa", "avg_age": 37.97826086956522, "authors": "centers_for_disease_control_and_prevention", "date": "2015-07-13", "gender": "?", "region": "africa", "raw_date": "2015-07-13", "country": "south_africa", "div": 0.014146873468195365, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01474, "tvalue": 4.51087, "clade": 94, "strain": "A/Brisbane/184/2015", "muts": ["A7G", "C942T", "G1087A"], "aa_muts": {"SigPep": ["T3A"], "HA1": [], "HA2": ["V18M"]}, "yvalue": 219.0, "attr": {"num_date_confidence": [2015.8104038329911, 2015.8104038329911], "region_confidence": {"oceania": 1.0}, "age_score": 1.032799050654641, "strain": "A/Brisbane/184/2015", "num_date": 2015.8104038329911, "lbi": 0.014416488534231614, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI750896", "division": "queensland", "avg_age": 37.97826086956522, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2015-10-24", "gender": "female", "region": "oceania", "raw_date": "2015-10-24", "country": "australia", "div": 0.014736870162972215, "age": 38, "clade_membership": "3c2.A"}}], "yvalue": 219.5, "attr": {"num_date": 2015.3379126251493, "num_date_confidence": [2015.13017348694, 2015.4643482559236], "region_confidence": {"oceania": 0.4089865299262651, "africa": 0.40190057864886686, "north_america": 0.1887365193689934}, "region": "oceania", "age_score": 1.032799050654641, "region_entropy": 0.4561594211979836, "ne": 5, "glyc": 12, "num_gender": 0.5, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.046974298336442455, "div": 0.012968806350461711, "age": 38.0, "ep": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.01238, "tvalue": 3.73996, "clade": 95, "strain": "NODE_0000165", "muts": ["G473A", "C1347T"], "aa_muts": {"SigPep": [], "HA1": ["R142K"], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 3.80087, "clade": 96, "strain": "NODE_0000180", "muts": ["A1128G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01533, "tvalue": 4.31374, "clade": 97, "strain": "A/Norway/2590/2015", "muts": ["T177C", "G205A", "C1170T", "G1484A"], "aa_muts": {"SigPep": [], "HA1": ["D53N"], "HA2": ["G150E"]}, "yvalue": 218.0, "attr": {"num_date_confidence": [2015.6132785763175, 2015.6132785763175], "region_confidence": {"europe": 1.0}, "age_score": 1.032799050654641, "strain": "A/Norway/2590/2015", "num_date": 2015.6132785763175, "lbi": 0.0235985608752634, "ep": 8, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI651390", "division": "norway", "avg_age": 37.97826086956522, "authors": "norwegian_institute_of_public_health", "date": "2015-08-13", "gender": "female", "region": "europe", "raw_date": "2015-08-13", "country": "norway", "div": 0.015325687527262266, "age": 49, "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 3.84831, "clade": 98, "strain": "A/Wisconsin/20/2015", "muts": ["C527T"], "aa_muts": {"SigPep": [], "HA1": ["T160I"], "HA2": []}, "yvalue": 217.0, "attr": {"num_date_confidence": [2015.1478439425052, 2015.1478439425052], "region_confidence": {"north_america": 1.0}, "age_score": 1.032799050654641, "strain": "A/Wisconsin/20/2015", "num_date": 2015.1478439425052, "lbi": 0.07554830967245778, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI579796", "division": "wisconsin", "avg_age": 37.97826086956522, "authors": "centers_for_disease_control_and_prevention", "date": "2015-02-24", "gender": "female", "region": "north_america", "raw_date": "2015-02-24", "country": "usa", "div": 0.013556439006463857, "age": 91, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 3.85076, "clade": 99, "strain": "NODE_0000278", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 4.22332, "clade": 100, "strain": "NODE_0000185", "muts": ["G978A", "T1624C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01473, "tvalue": 4.3685, "clade": 101, "strain": "A/Ibaraki/55/2015", "muts": ["C1320T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 216.0, "attr": {"num_date_confidence": [2015.6680355920603, 2015.6680355920603], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.032799050654641, "strain": "A/Ibaraki/55/2015", "num_date": 2015.6680355920603, "lbi": 0.02057945382531812, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI670307", "division": "ibaraki", "avg_age": 37.97826086956522, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-09-02", "gender": "female", "region": "japan_korea", "raw_date": "2015-09-02", "country": "japan", "div": 0.0147344302474508, "age": 45, "clade_membership": "3c2.A"}}, {"xvalue": 0.01473, "tvalue": 4.30279, "clade": 102, "strain": "A/Sydney/1028/2015", "muts": ["G983A"], "aa_muts": {"SigPep": [], "HA1": ["S312N"], "HA2": []}, "yvalue": 215.0, "attr": {"num_date_confidence": [2015.602327173169, 2015.602327173169], "region_confidence": {"oceania": 1.0}, "age_score": 1.032799050654641, "strain": "A/Sydney/1028/2015", "num_date": 2015.602327173169, "lbi": 0.0242535800685981, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI675840", "division": "new_south_wales", "avg_age": 37.97826086956522, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2015-08-09", "gender": "female", "region": "oceania", "raw_date": "2015-08-09", "country": "australia", "div": 0.014734421438097466, "age": "unknown", "clade_membership": "3c2.A"}}], "yvalue": 215.5, "attr": {"num_date": 2015.5228546030978, "num_date_confidence": [2015.3509720068112, 2015.5823728974497], "region_confidence": {"japan_korea": 0.8429287515756434, "oceania": 0.1550538241968325}, "region": "japan_korea", "age_score": 1.032799050654641, "region_entropy": 0.19357512056472195, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.02958435467626889, "div": 0.014145623248414667, "age": 45.0, "ep": 7, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.03988, "clade": 103, "strain": "NODE_0000279", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01356, "tvalue": 4.73332, "clade": 104, "strain": "A/Santiago/3142/2016", "muts": ["A801C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 214.0, "attr": {"num_date_confidence": [2016.0328542094455, 2016.0328542094455], "region_confidence": {"south_america": 1.0}, "age_score": 1.032799050654641, "strain": "A/Santiago/3142/2016", "num_date": 2016.0328542094455, "lbi": 0.008266793006996138, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "undetermined", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI823721", "division": "santiago", "avg_age": 37.97826086956522, "authors": "instituto_de_salud_publica_de_chile", "date": "2016-01-13", "gender": "female", "region": "south_america", "raw_date": "2016-01-13", "country": "chile", "div": 0.01355647859269868, "age": 29, "clade_membership": "3c2.A"}}, {"xvalue": 0.01415, "tvalue": 4.25625, "clade": 105, "strain": "NODE_0000184", "muts": ["C1101T", "C1224T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0165, "tvalue": 4.50813, "clade": 106, "strain": "A/Nebraska/19/2015", "muts": ["G281A", "A323G", "T723C", "T994C"], "aa_muts": {"SigPep": [], "HA1": ["G78D", "K92R"], "HA2": []}, "yvalue": 213.0, "attr": {"num_date_confidence": [2015.807665982204, 2015.807665982204], "region_confidence": {"north_america": 1.0}, "age_score": 1.032799050654641, "strain": "A/Nebraska/19/2015", "num_date": 2015.807665982204, "lbi": 0.014515502490672677, "ep": 9, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI686143", "division": "nebraska", "avg_age": 37.97826086956522, "authors": "centers_for_disease_control_and_prevention", "date": "2015-10-23", "gender": "male", "region": "north_america", "raw_date": "2015-10-23", "country": "usa", "div": 0.016503895686456303, "age": 29, "clade_membership": "3c2.A"}}, {"xvalue": 0.01415, "tvalue": 4.25625, "clade": 107, "strain": "A/Sendai-H/N280/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 212.0, "attr": {"num_date_confidence": [2015.5557837097879, 2015.5557837097879], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.032799050654641, "strain": "A/Sendai-H/N280/2015", "num_date": 2015.5557837097879, "lbi": 0.02724644071553437, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI643110", "division": "miyagi", "avg_age": 37.97826086956522, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-07-23", "gender": "female", "region": "japan_korea", "raw_date": "2015-07-23", "country": "japan", "div": 0.014145781713966112, "age": 1, "clade_membership": "3c2.A"}}], "yvalue": 212.5, "attr": {"num_date": 2015.5557837097879, "num_date_confidence": [2015.4047335866337, 2015.5557837097879], "region_confidence": {"japan_korea": 0.9865155800884182, "north_america": 0.013412466642230569}, "region": "japan_korea", "age_score": 1.032799050654641, "region_entropy": 0.03124611313236126, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.02724644071553437, "div": 0.014145781661061802, "age": 15.0, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 213.25, "attr": {"num_date": 2015.3394130105496, "num_date_confidence": [2015.1777946143125, 2015.4470539849867], "region_confidence": {"japan_korea": 0.8983601640082898, "oceania": 0.06774728893931624, "south_america": 0.01901416742704329, "north_america": 0.014825694761769323}, "region": "japan_korea", "age_score": 1.032799050654641, "region_entropy": 0.1811215202905029, "ne": 5, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.04679842950290174, "div": 0.012967620456582328, "age": 19.666666666666668, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 214.375, "attr": {"num_date": 2015.150296110005, "num_date_confidence": [2015.0879371370982, 2015.3472729444534], "region_confidence": {"japan_korea": 0.8379518359848237, "oceania": 0.14540479494110026, "north_america": 0.016466016671811304}, "region": "japan_korea", "age_score": 1.032799050654641, "region_entropy": 0.21619603125528733, "ne": 5, "glyc": 12, "num_gender": 0.6, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.07508658363139367, "div": 0.012967620403678019, "age": 26.0, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 216.45833, "attr": {"num_date": 2015.1004086158423, "num_date_confidence": [2015.0359602133444, 2015.1450639373065], "region_confidence": {"japan_korea": 0.039606917000763804, "oceania": 0.1536835680350984, "north_america": 0.7940174319849351}, "region": "north_america", "age_score": 1.032799050654641, "region_entropy": 0.2876771195620103, "ne": 5, "glyc": 12, "num_gender": 0.7142857142857143, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.0850603182673016, "div": 0.01296762035077371, "age": 40.666666666666664, "ep": 7, "clade_membership": "3c2.A"}}, {"xvalue": 0.01238, "tvalue": 3.84536, "clade": 108, "strain": "NODE_0000280", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01356, "tvalue": 4.23434, "clade": 109, "strain": "A/Cambodia/Z0722379/2015", "muts": ["G405A", "G1577A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["G181E"]}, "yvalue": 211.0, "attr": {"num_date_confidence": [2015.5338809034909, 2015.5338809034909], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Cambodia/Z0722379/2015", "num_date": 2015.5338809034909, "lbi": 0.028779977290225713, "ep": 7, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI652601", "division": "cambodia", "avg_age": 37.97826086956522, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2015-07-15", "gender": "?", "region": "southeast_asia", "raw_date": "2015-07-15", "country": "cambodia", "div": 0.013557053560212131, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01238, "tvalue": 4.00253, "clade": 110, "strain": "NODE_0000281", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01238, "tvalue": 4.05371, "clade": 111, "strain": "NODE_0000282", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 4.45885, "clade": 112, "strain": "A/Lao/I1054/2015", "muts": ["C114T", "G1269A", "T1443G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 210.0, "attr": {"num_date_confidence": [2015.7583846680357, 2015.7583846680357], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Lao/I1054/2015", "num_date": 2015.7583846680357, "lbi": 0.016418692970611513, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI706593", "division": "laos", "avg_age": 37.97826086956522, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-10-05", "gender": "male", "region": "southeast_asia", "raw_date": "2015-10-05", "country": "laos", "div": 0.014147362354428775, "age": 4, "clade_membership": "3c2.A"}}, {"xvalue": 0.01238, "tvalue": 4.12642, "clade": 113, "strain": "NODE_0000283", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 4.62038, "clade": 114, "strain": "A/Cambodia/1290/2015", "muts": ["C704T", "A759C", "G1125A", "T1624A"], "aa_muts": {"SigPep": [], "HA1": ["S219F"], "HA2": ["L197M"]}, "yvalue": 209.0, "attr": {"num_date_confidence": [2015.9199178644765, 2015.9199178644765], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Cambodia/1290/2015", "num_date": 2015.9199178644765, "lbi": 0.010963674719089999, "ep": 8, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI727337", "division": "cambodia", "avg_age": 37.97826086956522, "authors": "centers_for_disease_control_and_prevention", "date": "2015-12-03", "gender": "male", "region": "southeast_asia", "raw_date": "2015-12-03", "country": "cambodia", "div": 0.014738667595105082, "age": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01238, "tvalue": 4.28636, "clade": 115, "strain": "NODE_0000284", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 4.60122, "clade": 116, "strain": "A/Taiwan/1095/2015", "muts": ["G830A"], "aa_muts": {"SigPep": [], "HA1": ["R261Q"], "HA2": []}, "yvalue": 208.0, "attr": {"num_date_confidence": [2015.9007529089665, 2015.9007529089665], "region_confidence": {"china": 1.0}, "age_score": 1.032799050654641, "strain": "A/Taiwan/1095/2015", "num_date": 2015.9007529089665, "lbi": 0.011501758062533573, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI706841", "division": "taiwan", "avg_age": 37.97826086956522, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-11-26", "gender": "female", "region": "china", "raw_date": "2015-11-26", "country": "taiwan", "div": 0.012967678857092591, "age": 14, "clade_membership": "3c2.A"}}, {"xvalue": 0.01238, "tvalue": 4.28636, "clade": 117, "strain": "A/Lao/I805/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 207.0, "attr": {"num_date_confidence": [2015.5859000684463, 2015.5859000684463], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Lao/I805/2015", "num_date": 2015.5859000684463, "lbi": 0.0252703557684307, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI674472", "division": "laos", "avg_age": 37.97826086956522, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-08-03", "gender": "female", "region": "southeast_asia", "raw_date": "2015-08-03", "country": "laos", "div": 0.012378810645288407, "age": 3, "clade_membership": "3c2.A"}}], "yvalue": 207.5, "attr": {"num_date": 2015.5859000684463, "num_date_confidence": [2015.4434241897854, 2015.5859000684463], "region_confidence": {"southeast_asia": 0.9999999667909838}, "region": "southeast_asia", "age_score": 1.032799050654641, "region_entropy": 2.629174843946203e-07, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.0252703557684307, "div": 0.012378810592384097, "age": 8.5, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 208.25, "attr": {"num_date": 2015.4259540732105, "num_date_confidence": [2015.3308127699818, 2015.556996165891], "region_confidence": {"southeast_asia": 0.9999999999526391}, "region": "southeast_asia", "age_score": 1.032799050654641, "region_entropy": 5.280262796705276e-10, "ne": 5, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.0376938513910776, "div": 0.012378810539479788, "age": 7.333333333333333, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 209.125, "attr": {"num_date": 2015.3532459802043, "num_date_confidence": [2015.2350664189846, 2015.4777251165037], "region_confidence": {"southeast_asia": 0.9999998936732362}, "region": "southeast_asia", "age_score": 1.032799050654641, "region_entropy": 8.11464959905176e-07, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.04520769069994599, "div": 0.012378810486575478, "age": 6.5, "ep": 7, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.05007, "clade": 118, "strain": "NODE_0000166", "muts": ["A550G"], "aa_muts": {"SigPep": [], "HA1": ["M168V"], "HA2": []}, "children": [{"xvalue": 0.0177, "tvalue": 5.05365, "clade": 119, "strain": "A/SouthAustralia/27/2016", "muts": ["G120A", "C396T", "G510A", "T1032C", "G1056T", "G1110A", "T1275A", "G1694T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["C220F"]}, "yvalue": 206.0, "attr": {"num_date_confidence": [2016.35318275154, 2016.35318275154], "region_confidence": {"oceania": 1.0}, "age_score": 1.032799050654641, "strain": "A/SouthAustralia/27/2016", "num_date": 2016.35318275154, "lbi": 0.003711459859151522, "ep": 8, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI831558", "division": "south_australia", "avg_age": 37.97826086956522, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-05-09", "gender": "female", "region": "oceania", "raw_date": "2016-05-09", "country": "australia", "div": 0.017697877253439256, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 4.20697, "clade": 120, "strain": "A/Norway/2565/2015", "muts": ["C618T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 205.0, "attr": {"num_date_confidence": [2015.5065023956195, 2015.5065023956195], "region_confidence": {"europe": 1.0}, "age_score": 1.032799050654641, "strain": "A/Norway/2565/2015", "num_date": 2015.5065023956195, "lbi": 0.030818839715523783, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI629040", "division": "norway", "avg_age": 37.97826086956522, "authors": "norwegian_institute_of_public_health", "date": "2015-07-05", "gender": "male", "region": "europe", "raw_date": "2015-07-05", "country": "norway", "div": 0.013556439112272476, "age": 64, "clade_membership": "3c2.A"}}, {"xvalue": 0.01592, "tvalue": 4.38493, "clade": 121, "strain": "A/Bangladesh/910004/2015", "muts": ["T276C", "A435G", "G471A", "A858T", "A1300G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["I89V"]}, "yvalue": 204.0, "attr": {"num_date_confidence": [2015.684462696783, 2015.684462696783], "region_confidence": {"south_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Bangladesh/910004/2015", "num_date": 2015.684462696783, "lbi": 0.01975142082265059, "ep": 8, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI752089", "division": "bangladesh", "avg_age": 37.97826086956522, "authors": "centers_for_disease_control_and_prevention", "date": "2015-09-08", "gender": "male", "region": "south_asia", "raw_date": "2015-09-08", "country": "bangladesh", "div": 0.01591743329913008, "age": 19, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.12709, "clade": 122, "strain": "NODE_0000285", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 4.45611, "clade": 123, "strain": "A/Bangladesh/1010001/2015", "muts": ["G562A", "G983A"], "aa_muts": {"SigPep": [], "HA1": ["E172K", "S312N"], "HA2": []}, "yvalue": 203.0, "attr": {"num_date_confidence": [2015.7556468172484, 2015.7556468172484], "region_confidence": {"south_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Bangladesh/1010001/2015", "num_date": 2015.7556468172484, "lbi": 0.016531458277287036, "ep": 10, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI746848", "division": "bangladesh", "avg_age": 37.97826086956522, "authors": "centers_for_disease_control_and_prevention", "date": "2015-10-04", "gender": "male", "region": "south_asia", "raw_date": "2015-10-04", "country": "bangladesh", "div": 0.01414574660875493, "age": 56, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.2564, "clade": 124, "strain": "NODE_0000286", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 4.62038, "clade": 125, "strain": "A/Bangladesh/203006/2015", "muts": ["C1047A", "G1080A", "C1170A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 202.0, "attr": {"num_date_confidence": [2015.9199178644765, 2015.9199178644765], "region_confidence": {"south_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Bangladesh/203006/2015", "num_date": 2015.9199178644765, "lbi": 0.010963674719089999, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI701817", "division": "bangladesh", "avg_age": 37.97826086956522, "authors": "centers_for_disease_control_and_prevention", "date": "2015-12-03", "gender": "male", "region": "south_asia", "raw_date": "2015-12-03", "country": "bangladesh", "div": 0.014736039147005355, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.40727, "clade": 126, "strain": "NODE_0000287", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 4.71963, "clade": 127, "strain": "A/Tunisia/407/2016", "muts": ["A318G", "A688G", "T1104C"], "aa_muts": {"SigPep": [], "HA1": ["I214V"], "HA2": []}, "yvalue": 201.0, "attr": {"num_date_confidence": [2016.01916495551, 2016.01916495551], "region_confidence": {"africa": 1.0}, "age_score": 1.032799050654641, "strain": "A/Tunisia/407/2016", "num_date": 2016.01916495551, "lbi": 0.00855460540959878, "ep": 9, "region_entropy": -0.0, "ne": 5, "passage": "undetermined", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI769551", "division": "tunisia", "avg_age": 37.97826086956522, "authors": "crick_worldwide_influenza_centre", "date": "2016-01-08", "gender": "male", "region": "africa", "raw_date": "2016-01-08", "country": "tunisia", "div": 0.014735031481270477, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.46305, "clade": 128, "strain": "NODE_0000288", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 4.55467, "clade": 129, "strain": "NODE_0000289", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 4.6943, "clade": 130, "strain": "A/Rome/29/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 200.0, "attr": {"num_date_confidence": [2015.993839835729, 2015.993839835729], "region_confidence": {"europe": 1.0}, "age_score": 1.032799050654641, "strain": "A/Rome/29/2015", "num_date": 2015.993839835729, "lbi": 0.009113734685661956, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI704226", "division": "lazio", "avg_age": 37.97826086956522, "authors": "crick_worldwide_influenza_centre", "date": "2015-12-30", "gender": "female", "region": "europe", "raw_date": "2015-12-30", "country": "italy", "div": 0.012967620774008185, "age": 52, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.55467, "clade": 131, "strain": "A/Bangladesh/14006/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 199.0, "attr": {"num_date_confidence": [2015.8542094455852, 2015.8542094455852], "region_confidence": {"south_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Bangladesh/14006/2015", "num_date": 2015.8542094455852, "lbi": 0.012921060243026328, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI701777", "division": "bangladesh", "avg_age": 37.97826086956522, "authors": "centers_for_disease_control_and_prevention", "date": "2015-11-09", "gender": "female", "region": "south_asia", "raw_date": "2015-11-09", "country": "bangladesh", "div": 0.012967620774008185, "age": 25, "clade_membership": "3c2.A"}}], "yvalue": 199.5, "attr": {"num_date": 2015.8542094455852, "num_date_confidence": [2015.7627862316692, 2015.8542094455852], "region_confidence": {"south_asia": 0.9999999570632381}, "region": "south_asia", "age_score": 1.032799050654641, "region_entropy": 3.351198923641593e-07, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.012921060243026328, "div": 0.012967620721103875, "age": 38.5, "ep": 8, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.53994, "clade": 132, "strain": "NODE_0000290", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 4.98246, "clade": 133, "strain": "A/Moscow/135/2016", "muts": ["G232A", "T585C", "G1323A"], "aa_muts": {"SigPep": [], "HA1": ["E62K"], "HA2": []}, "yvalue": 198.0, "attr": {"num_date_confidence": [2016.2819986310747, 2016.2819986310747], "region_confidence": {"west_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Moscow/135/2016", "num_date": 2016.2819986310747, "lbi": 0.004434370175630234, "ep": 9, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI781640", "division": "moscow", "avg_age": 37.97826086956522, "authors": "crick_worldwide_influenza_centre", "date": "2016-04-13", "gender": "female", "region": "west_asia", "raw_date": "2016-04-13", "country": "russia", "div": 0.014735384291750872, "age": 23, "clade_membership": "3c2.A"}}, {"xvalue": 0.01474, "tvalue": 5.18232, "clade": 134, "strain": "A/Bangladesh/1008/2016", "muts": ["C411A", "T729A", "A1614G"], "aa_muts": {"SigPep": [], "HA1": ["N121K"], "HA2": ["I193M"]}, "yvalue": 197.0, "attr": {"num_date_confidence": [2016.4818617385351, 2016.4818617385351], "region_confidence": {"south_asia": 1.0}, "age_score": 1.032799050654641, "strain": "A/Bangladesh/1008/2016", "num_date": 2016.4818617385351, "lbi": 0.0026905020846514434, "ep": 9, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI832277", "division": "bangladesh", "avg_age": 37.97826086956522, "authors": "centers_for_disease_control_and_prevention", "date": "2016-06-25", "gender": "female", "region": "south_asia", "raw_date": "2016-06-25", "country": "bangladesh", "div": 0.014736460173931118, "age": 7, "clade_membership": "3c2.A"}}], "yvalue": 197.5, "attr": {"num_date": 2015.8394723381098, "num_date_confidence": [2015.7286677397856, 2016.0600630921463], "region_confidence": {"south_asia": 0.9999593259103886}, "region": "south_asia", "age_score": 1.032799050654641, "region_entropy": 0.00019648647630403457, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.013405986029534859, "div": 0.012967620721103875, "age": 15.0, "ep": 8, "clade_membership": "3c2.A"}}], "yvalue": 198.5, "attr": {"num_date": 2015.762591674165, "num_date_confidence": [2015.6661616073952, 2015.8473577229754], "region_confidence": {"south_asia": 0.9999999909475212}, "region": "south_asia", "age_score": 1.032799050654641, "region_entropy": 7.956209472837069e-08, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.01624691404294455, "div": 0.012967620668199566, "age": 26.75, "ep": 8, "clade_membership": "3c2.A"}}], "yvalue": 199.75, "attr": {"num_date": 2015.7068036460987, "num_date_confidence": [2015.5230542679815, 2015.7952780269466], "region_confidence": {"south_asia": 0.9999901815728888}, "region": "south_asia", "age_score": 1.032799050654641, "region_entropy": 5.348315577593133e-05, "ne": 5, "glyc": 12, "num_gender": 0.6, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.01867849861903967, "div": 0.012967620615295257, "age": 26.75, "ep": 8, "clade_membership": "3c2.A"}}], "yvalue": 200.875, "attr": {"num_date": 2015.5559363163236, "num_date_confidence": [2015.4117214422097, 2015.7091524495256], "region_confidence": {"south_asia": 0.9999999988660496}, "region": "south_asia", "age_score": 1.032799050654641, "region_entropy": 1.0686514756114785e-08, "ne": 5, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.027236047735885387, "div": 0.012967620562390947, "age": 26.75, "ep": 8, "clade_membership": "3c2.A"}}], "yvalue": 201.9375, "attr": {"num_date": 2015.4266266008426, "num_date_confidence": [2015.3365748693864, 2015.5838944623993], "region_confidence": {"south_asia": 0.9999999449904258}, "region": "south_asia", "age_score": 1.032799050654641, "region_entropy": 4.4084892316579245e-07, "ne": 5, "glyc": 12, "num_gender": 0.14285714285714285, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.03763052924680666, "div": 0.012967620509486638, "age": 32.6, "ep": 8, "clade_membership": "3c2.A"}}], "yvalue": 204.23438, "attr": {"num_date": 2015.349607019971, "num_date_confidence": [2015.2905726231013, 2015.4469310191043], "region_confidence": {"south_asia": 0.9997264939409067}, "region": "south_asia", "age_score": 1.032799050654641, "region_entropy": 0.0011806041801141099, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.045620839612825426, "div": 0.012967620456582328, "age": 35.142857142857146, "ep": 8, "clade_membership": "3c2.A"}}], "yvalue": 206.67969, "attr": {"num_date": 2015.3020698677153, "num_date_confidence": [2015.1244652694888, 2015.3676358463501], "region_confidence": {"southeast_asia": 0.9994926910563603}, "region": "southeast_asia", "age_score": 1.032799050654641, "region_entropy": 0.002005186303158533, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.051377868294918076, "div": 0.012378810433671169, "age": 24.727272727272727, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 208.83984, "attr": {"num_date": 2015.1448947312724, "num_date_confidence": [2015.0190678740867, 2015.3139423795656], "region_confidence": {"southeast_asia": 0.9993499154740626}, "region": "southeast_asia", "age_score": 1.032799050654641, "region_entropy": 0.0026375927225599136, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.07610738799862872, "div": 0.01237881038076686, "age": 24.727272727272727, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 212.64909, "attr": {"num_date": 2015.0394934035326, "num_date_confidence": [2014.9128547751511, 2015.1051293989478], "region_confidence": {"japan_korea": 0.018482135728090685, "southeast_asia": 0.03197023624560836, "oceania": 0.1762842423906407, "north_america": 0.7713535526881883}, "region": "north_america", "age_score": 1.032799050654641, "region_entropy": 0.30510456765314126, "ne": 5, "glyc": 12, "num_gender": 0.22727272727272727, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.09905236624641983, "div": 0.01237881032786255, "age": 30.352941176470587, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 216.07454, "attr": {"num_date": 2014.9330814714185, "num_date_confidence": [2014.5852888051159, 2015.01560239368], "region_confidence": {"oceania": 0.24722771201831362, "north_america": 0.751849260070999}, "region": "north_america", "age_score": 1.032799050654641, "region_entropy": 0.24653110582754414, "ne": 5, "glyc": 12, "num_gender": 0.25, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.12924095012448955, "div": 0.011200807759083648, "age": 30.77777777777778, "ep": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.01061, "tvalue": 3.6385, "clade": 135, "strain": "NODE_0000291", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01061, "tvalue": 3.66099, "clade": 136, "strain": "NODE_0000292", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01179, "tvalue": 3.86473, "clade": 137, "strain": "A/Fiji/2/2015", "muts": ["A657G", "A714G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 196.0, "attr": {"num_date_confidence": [2015.1642710472279, 2015.1642710472279], "region_confidence": {"oceania": 1.0}, "age_score": 1.432755882120805, "strain": "A/Fiji/2/2015", "num_date": 2015.1642710472279, "lbi": 0.1375239509941725, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI636656", "division": "fiji", "avg_age": 42.607142857142854, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2015-03-02", "gender": "male", "region": "oceania", "raw_date": "2015-03-02", "country": "fiji", "div": 0.011789936084663917, "age": 28, "clade_membership": "3c2.A"}}, {"xvalue": 0.01238, "tvalue": 4.33343, "clade": 138, "strain": "NODE_0000213", "muts": ["T285C", "C637A", "C1170T"], "aa_muts": {"SigPep": [], "HA1": ["Q197K"], "HA2": []}, "children": [{"xvalue": 0.01238, "tvalue": 4.42288, "clade": 139, "strain": "NODE_0000293", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 5.00436, "clade": 140, "strain": "A/Ecuador/2495/2016", "muts": ["C333T", "T1059C", "G1110A", "G1230A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 195.0, "attr": {"num_date_confidence": [2016.3039014373717, 2016.3039014373717], "region_confidence": {"south_america": 1.0}, "age_score": 1.432755882120805, "strain": "A/Ecuador/2495/2016", "num_date": 2016.3039014373717, "lbi": 0.007962333543513509, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI829810", "division": "ecuador", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2016-04-21", "gender": "male", "region": "south_america", "raw_date": "2016-04-21", "country": "ecuador", "div": 0.014738197915014076, "age": 52, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.58205, "clade": 141, "strain": "A/MatoGrossodoSul/85939/2015", "muts": ["C336G"], "aa_muts": {"SigPep": [], "HA1": ["N96K"], "HA2": []}, "yvalue": 194.0, "attr": {"num_date_confidence": [2015.8815879534566, 2015.8815879534566], "region_confidence": {"south_america": 1.0}, "age_score": 1.432755882120805, "strain": "A/MatoGrossodoSul/85939/2015", "num_date": 2015.8815879534566, "lbi": 0.022885552709373327, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "egg", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI685428", "division": "mato_grosso_do_sul", "avg_age": 42.607142857142854, "authors": "instituto_adolfo_lutz", "date": "2015-11-19", "gender": "female", "region": "south_america", "raw_date": "2015-11-19", "country": "brazil", "div": 0.01296996475052744, "age": 31, "clade_membership": "3c2.A"}}], "yvalue": 194.5, "attr": {"num_date": 2015.7224160430703, "num_date_confidence": [2015.534200844914, 2015.8616439248797], "region_confidence": {"south_america": 0.9999976999486647}, "region": "south_america", "age_score": 1.432755882120805, "region_entropy": 1.3981818949841163e-05, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.03407062586166684, "div": 0.012380058448225522, "age": 41.5, "ep": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.54115, "clade": 142, "strain": "NODE_0000215", "muts": ["G830A"], "aa_muts": {"SigPep": [], "HA1": ["R261Q"], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 5.0646, "clade": 143, "strain": "A/Washington/75/2016", "muts": ["A323G", "G357A", "A468G", "C543T", "G1087A", "G1551T"], "aa_muts": {"SigPep": [], "HA1": ["K92R", "I140M"], "HA2": ["V18M", "Q172H"]}, "yvalue": 193.0, "attr": {"num_date_confidence": [2016.3641341546886, 2016.3641341546886], "region_confidence": {"north_america": 1.0}, "age_score": 1.432755882120805, "strain": "A/Washington/75/2016", "num_date": 2016.3641341546886, "lbi": 0.0068492579801037725, "ep": 9, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI787084", "division": "washington", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2016-05-13", "gender": "male", "region": "north_america", "raw_date": "2016-05-13", "country": "usa", "div": 0.016510563303653344, "age": 65, "clade_membership": "3c2.A"}}, {"xvalue": 0.01533, "tvalue": 4.84504, "clade": 144, "strain": "NODE_0000219", "muts": ["A63G", "C85T", "A876C", "A1134G"], "aa_muts": {"SigPep": [], "HA1": ["K276N"], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.9058, "clade": 145, "strain": "A/Ecuador/220/2016", "muts": ["C553T"], "aa_muts": {"SigPep": [], "HA1": ["P169S"], "HA2": []}, "yvalue": 192.0, "attr": {"num_date_confidence": [2016.2053388090349, 2016.2053388090349], "region_confidence": {"south_america": 1.0}, "age_score": 1.432755882120805, "strain": "A/Ecuador/220/2016", "num_date": 2016.2053388090349, "lbi": 0.010187165935974844, "ep": 8, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI829834", "division": "ecuador", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2016-03-16", "gender": "female", "region": "south_america", "raw_date": "2016-03-16", "country": "ecuador", "div": 0.01591604970812124, "age": 42, "clade_membership": "3c2.A"}}, {"xvalue": 0.01651, "tvalue": 5.34933, "clade": 146, "strain": "A/Talca/62161/2016", "muts": ["A231G", "G957A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 191.0, "attr": {"num_date_confidence": [2016.6488706365503, 2016.6488706365503], "region_confidence": {"south_america": 1.0}, "age_score": 1.432755882120805, "strain": "A/Talca/62161/2016", "num_date": 2016.6488706365503, "lbi": 0.0033612035783622133, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "undetermined", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI977511", "division": "maule", "avg_age": 42.607142857142854, "authors": "instituto_de_salud_publica_de_chile", "date": "2016-08-25", "gender": "male", "region": "south_america", "raw_date": "2016-08-25", "country": "chile", "div": 0.01650523935956198, "age": 6, "clade_membership": "3c2.A"}}], "yvalue": 191.5, "attr": {"num_date": 2016.1445803788022, "num_date_confidence": [2016.0087180715657, 2016.1961955909471], "region_confidence": {"south_america": 0.999999775436074}, "region": "south_america", "age_score": 1.432755882120805, "region_entropy": 1.5914634210190734e-06, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.011858261077674612, "div": 0.015327231052431094, "age": 24.0, "ep": 8, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.64054, "clade": 147, "strain": "NODE_0000294", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 5.2097, "clade": 148, "strain": "A/Peru/1416/2016", "muts": ["T57C", "G1188A", "G1341A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 190.0, "attr": {"num_date_confidence": [2016.5092402464065, 2016.5092402464065], "region_confidence": {"south_america": 1.0}, "age_score": 1.432755882120805, "strain": "A/Peru/1416/2016", "num_date": 2016.5092402464065, "lbi": 0.004765369568352687, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI827182", "division": "peru", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2016-07-05", "gender": "male", "region": "south_america", "raw_date": "2016-07-05", "country": "peru", "div": 0.014736879537542727, "age": 72, "clade_membership": "3c2.A"}}, {"xvalue": 0.01415, "tvalue": 5.08781, "clade": 149, "strain": "NODE_0000217", "muts": ["G146A", "T328C"], "aa_muts": {"SigPep": [], "HA1": ["R33Q", "Y94H"], "HA2": []}, "children": [{"xvalue": 0.01533, "tvalue": 5.31922, "clade": 150, "strain": "A/Ohio/31/2016", "muts": ["G78T", "A1494G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 189.0, "attr": {"num_date_confidence": [2016.6187542778919, 2016.6187542778919], "region_confidence": {"north_america": 1.0}, "age_score": 1.432755882120805, "strain": "A/Ohio/31/2016", "num_date": 2016.6187542778919, "lbi": 0.0036240421333955455, "ep": 8, "region_entropy": -0.0, "ne": 4, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI840607", "division": "ohio", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2016-08-14", "gender": "male", "region": "north_america", "raw_date": "2016-08-14", "country": "usa", "div": 0.015325645270305485, "age": 84, "clade_membership": "3c2.A"}}, {"xvalue": 0.01474, "tvalue": 5.25351, "clade": 151, "strain": "A/South-Africa/VW0073/2016", "muts": ["A121G"], "aa_muts": {"SigPep": [], "HA1": ["I25V"], "HA2": []}, "yvalue": 188.0, "attr": {"num_date_confidence": [2016.5530458590006, 2016.5530458590006], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/South-Africa/VW0073/2016", "num_date": 2016.5530458590006, "lbi": 0.004271055821031889, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI829365", "division": "south_africa", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-07-21", "gender": "female", "region": "africa", "raw_date": "2016-07-21", "country": "south_africa", "div": 0.014735857181981957, "age": 36, "clade_membership": "3c2.A"}}], "yvalue": 188.5, "attr": {"num_date": 2016.38734765282, "num_date_confidence": [2016.1390506848152, 2016.519193393507], "region_confidence": {"south_america": 0.1763691450459724, "africa": 0.47629851562834186, "north_america": 0.34713132217475656}, "region": "africa", "age_score": 1.432755882120805, "region_entropy": 0.4467554322363599, "ne": 4, "glyc": 12, "num_gender": 0.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.006463083830340255, "div": 0.014147041255532325, "age": 60.0, "ep": 8, "clade_membership": "3c2.A"}}], "yvalue": 189.25, "attr": {"num_date": 2015.9400727050602, "num_date_confidence": [2015.7401009926693, 2016.154797472413], "region_confidence": {"south_america": 0.9938477158404321}, "region": "south_america", "age_score": 1.432755882120805, "region_entropy": 0.01633043962799683, "ne": 5, "glyc": 12, "num_gender": -0.3333333333333333, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.019772536836080084, "div": 0.012968885709652366, "age": 64.0, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 191.25, "attr": {"num_date": 2015.8406839622037, "num_date_confidence": [2015.6131954707437, 2015.951154680414], "region_confidence": {"south_america": 0.9938848811245645}, "region": "south_america", "age_score": 1.432755882120805, "region_entropy": 0.01618409618614709, "ne": 5, "glyc": 12, "num_gender": -0.3333333333333333, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.02534967231557898, "div": 0.012968885656748056, "age": 50.833333333333336, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 192.875, "attr": {"num_date": 2015.6329711470792, "num_date_confidence": [2015.3654840336526, 2015.7742997292655], "region_confidence": {"south_america": 0.9938948878337868}, "region": "south_america", "age_score": 1.432755882120805, "region_entropy": 0.016193606103593085, "ne": 5, "glyc": 12, "num_gender": -0.25, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.04260824765061167, "div": 0.012380058395321213, "age": 48.5, "ep": 6, "clade_membership": "3c2.A"}}], "yvalue": 194.4375, "attr": {"num_date": 2014.960524410706, "num_date_confidence": [2014.886775767212, 2015.1253615191006], "region_confidence": {"west_asia": 0.1547629591387344, "oceania": 0.5626870192725562, "south_america": 0.0955881395918617, "north_america": 0.18670918530415043}, "region": "oceania", "age_score": 1.432755882120805, "region_entropy": 0.500566347707924, "ne": 5, "glyc": 12, "num_gender": -0.3333333333333333, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.22887240898851458, "div": 0.010612068254226514, "age": 46.22222222222222, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.0112, "tvalue": 4.00487, "clade": 152, "strain": "NODE_0000186", "muts": ["T480A"], "aa_muts": {"SigPep": [], "HA1": ["S144R"], "HA2": []}, "children": [{"xvalue": 0.01533, "tvalue": 4.52182, "clade": 153, "strain": "A/Oman/4940/2015", "muts": ["G96A", "T213C", "C214T", "T328C", "G765A", "T987C", "G1633A"], "aa_muts": {"SigPep": [], "HA1": ["H56Y", "Y94H"], "HA2": ["V200I"]}, "yvalue": 187.0, "attr": {"num_date_confidence": [2015.8213552361397, 2015.8213552361397], "region_confidence": {"west_asia": 1.0}, "age_score": 1.432755882120805, "strain": "A/Oman/4940/2015", "num_date": 2015.8213552361397, "lbi": 0.06393147938429698, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI731229", "division": "oman", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2015-10-28", "gender": "female", "region": "west_asia", "raw_date": "2015-10-28", "country": "oman", "div": 0.015331861915670032, "age": 66, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.80343, "clade": 154, "strain": "NODE_0000187", "muts": ["C411A", "G479A", "C1320T"], "aa_muts": {"SigPep": [], "HA1": ["N121K", "R144K"], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 5.21983, "clade": 155, "strain": "NODE_0000295", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 5.48075, "clade": 156, "strain": "A/Ghana/DILI-16-1024/2016", "muts": ["A1365G", "C1542T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 186.0, "attr": {"num_date_confidence": [2016.7802874743327, 2016.7802874743327], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/Ghana/DILI-16-1024/2016", "num_date": 2016.7802874743327, "lbi": 0.06357061092557939, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI913747", "division": "ghana", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-10-12", "gender": "female", "region": "africa", "raw_date": "2016-10-12", "country": "ghana", "div": 0.014147433449422648, "age": 67, "clade_membership": "A3"}}, {"xvalue": 0.01297, "tvalue": 5.3685, "clade": 157, "strain": "A/Dakar/17/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 185.0, "attr": {"num_date_confidence": [2016.6680355920603, 2016.6680355920603], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/Dakar/17/2016", "num_date": 2016.6680355920603, "lbi": 0.08416515309571514, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1001854", "division": "dakar", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-09-01", "gender": "female", "region": "africa", "raw_date": "2016-09-01", "country": "senegal", "div": 0.012969195609443037, "age": 56, "clade_membership": "A3"}}], "yvalue": 185.5, "attr": {"num_date": 2016.5193691663133, "num_date_confidence": [2016.1978544118615, 2016.6680355920603], "region_confidence": {"africa": 0.9999660928072621}, "region": "africa", "age_score": 1.432755882120805, "region_entropy": 0.0001664708005243765, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.12205198264426813, "div": 0.012969195556538728, "age": 61.5, "ep": 6, "clade_membership": "A3"}}, {"xvalue": 0.01474, "tvalue": 5.08947, "clade": 158, "strain": "NODE_0000189", "muts": ["G540A", "T1119C", "A1134G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01533, "tvalue": 5.24902, "clade": 159, "strain": "NODE_0000190", "muts": ["T483C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0165, "tvalue": 5.45063, "clade": 160, "strain": "A/Iran/55457/2016", "muts": ["G364A", "A1452G"], "aa_muts": {"SigPep": [], "HA1": ["A106T"], "HA2": []}, "yvalue": 184.0, "attr": {"num_date_confidence": [2016.7501711156742, 2016.7501711156742], "region_confidence": {"west_asia": 1.0}, "age_score": 1.432755882120805, "strain": "A/Iran/55457/2016", "num_date": 2016.7501711156742, "lbi": 0.20098528788971315, "ep": 6, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI978982", "division": "iran", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-10-01", "gender": "female", "region": "west_asia", "raw_date": "2016-10-01", "country": "iran", "div": 0.016503823688690536, "age": 33, "clade_membership": "A3"}}, {"xvalue": 0.01533, "tvalue": 5.4139, "clade": 161, "strain": "NODE_0000296", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01591, "tvalue": 5.59026, "clade": 162, "strain": "A/Yaroslavl/20163/2016", "muts": ["T285C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 183.0, "attr": {"num_date_confidence": [2016.889801505818, 2016.889801505818], "region_confidence": {"west_asia": 1.0}, "age_score": 1.432755882120805, "strain": "A/Yaroslavl/20163/2016", "num_date": 2016.889801505818, "lbi": 0.14176287046853145, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI960158", "division": "yaroslavl", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-11-21", "gender": "female", "region": "west_asia", "raw_date": "2016-11-21", "country": "russia", "div": 0.015914598521215063, "age": 92, "clade_membership": "A3"}}, {"xvalue": 0.01591, "tvalue": 5.62586, "clade": 163, "strain": "A/Algeria/62/2016", "muts": ["C114A"], "aa_muts": {"SigPep": [], "HA1": ["N22K"], "HA2": []}, "yvalue": 182.0, "attr": {"num_date_confidence": [2016.9253935660506, 2016.9253935660506], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/Algeria/62/2016", "num_date": 2016.9253935660506, "lbi": 0.12969370886449824, "ep": 6, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI978916", "division": "algeria", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-12-04", "gender": "male", "region": "africa", "raw_date": "2016-12-04", "country": "algeria", "div": 0.015914737712909254, "age": 6, "clade_membership": "A3"}}], "yvalue": 182.5, "attr": {"num_date": 2016.7134364185795, "num_date_confidence": [2016.550086003312, 2016.8395165961672], "region_confidence": {"west_asia": 0.9999481474080016}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 0.0002448595271815625, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.22031722807417894, "div": 0.01532588503893225, "age": 49.0, "ep": 6, "clade_membership": "A3"}}], "yvalue": 183.25, "attr": {"num_date": 2016.5485568851432, "num_date_confidence": [2016.4189762273686, 2016.6919326774491], "region_confidence": {"west_asia": 0.9999980921905813}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 1.1740241373431699e-05, "ne": 5, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.3327086849490472, "div": 0.015325884986027941, "age": 43.666666666666664, "ep": 6, "clade_membership": "A3"}}, {"xvalue": 0.01533, "tvalue": 5.1878, "clade": 164, "strain": "NODE_0000195", "muts": ["C1509T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01533, "tvalue": 5.1878, "clade": 165, "strain": "A/Cameroon/5665/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 181.0, "attr": {"num_date_confidence": [2016.4873374401095, 2016.4873374401095], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/Cameroon/5665/2016", "num_date": 2016.4873374401095, "lbi": 0.3877325895073129, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "undetermined", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI858909", "division": "cameroon", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-06-27", "gender": "male", "region": "africa", "raw_date": "2016-06-27", "country": "cameroon", "div": 0.015325955424804479, "age": "unknown", "clade_membership": "A3"}}, {"xvalue": 0.01591, "tvalue": 5.31374, "clade": 166, "strain": "A/Cameroon/7086/2016", "muts": ["G1407A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 180.0, "attr": {"num_date_confidence": [2016.6132785763175, 2016.6132785763175], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/Cameroon/7086/2016", "num_date": 2016.6132785763175, "lbi": 0.2830045737556797, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "undetermined", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI978625", "division": "cameroon", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-08-12", "gender": "female", "region": "africa", "raw_date": "2016-08-12", "country": "cameroon", "div": 0.015914870799186118, "age": "unknown", "clade_membership": "A3"}}, {"xvalue": 0.01591, "tvalue": 5.30279, "clade": 167, "strain": "A/Perth/105/2016", "muts": ["C316A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 179.0, "attr": {"num_date_confidence": [2016.602327173169, 2016.602327173169], "region_confidence": {"oceania": 1.0}, "age_score": 1.432755882120805, "strain": "A/Perth/105/2016", "num_date": 2016.602327173169, "lbi": 0.2908598590246128, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI919441", "division": "western_australia", "avg_age": 42.607142857142854, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-08-08", "gender": "female", "region": "oceania", "raw_date": "2016-08-08", "country": "australia", "div": 0.015914948947641342, "age": "unknown", "clade_membership": "A3"}}], "yvalue": 180.0, "attr": {"num_date": 2016.4873374401095, "num_date_confidence": [2016.4023492157967, 2016.4873374401095], "region_confidence": {"africa": 0.9999998447660811}, "region": "africa", "age_score": 1.432755882120805, "region_entropy": 1.1710327495497193e-06, "ne": 5, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.3877325895073129, "div": 0.015325955371900169, "age": "unknown", "ep": 6, "clade_membership": "A3"}}, {"xvalue": 0.01474, "tvalue": 5.14668, "clade": 168, "strain": "NODE_0000297", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01769, "tvalue": 5.86438, "clade": 169, "strain": "NODE_0000201", "muts": ["C452A", "G497A", "G830A", "G1404A", "C1461T"], "aa_muts": {"SigPep": [], "HA1": ["T135K", "R150K", "R261Q"], "HA2": []}, "children": [{"xvalue": 0.01946, "tvalue": 6.29731, "clade": 170, "strain": "A/Hubei-Dongbao/1631/2017", "muts": ["G21A", "A111G", "G833A"], "aa_muts": {"SigPep": [], "HA1": ["S262N"], "HA2": []}, "yvalue": 178.0, "attr": {"num_date_confidence": [2017.5968514715948, 2017.5968514715948], "region_confidence": {"china": 1.0}, "age_score": 1.432755882120805, "strain": "A/Hubei-Dongbao/1631/2017", "num_date": 2017.5968514715948, "lbi": 0.1384805561058334, "ep": 10, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1062412", "division": "hubei", "avg_age": 42.607142857142854, "authors": "who_chinese_national_influenza_center", "date": "2017-08-07", "gender": "female", "region": "china", "raw_date": "2017-08-07", "country": "china", "div": 0.019455545531945645, "age": 9, "clade_membership": "A3"}}, {"xvalue": 0.01769, "tvalue": 6.07663, "clade": 171, "strain": "NODE_0000298", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01769, "tvalue": 6.10019, "clade": 172, "strain": "A/Taiwan/501/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 177.0, "attr": {"num_date_confidence": [2017.3997262149212, 2017.3997262149212], "region_confidence": {"china": 1.0}, "age_score": 1.432755882120805, "strain": "A/Taiwan/501/2017", "num_date": 2017.3997262149212, "lbi": 0.2017004953816062, "ep": 9, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1046836", "division": "taiwan", "avg_age": 42.607142857142854, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2017-05-27", "gender": "male", "region": "china", "raw_date": "2017-05-27", "country": "taiwan", "div": 0.017686836822539843, "age": 20, "clade_membership": "A3"}}, {"xvalue": 0.01828, "tvalue": 6.30279, "clade": 173, "strain": "A/Niigata/767/2017", "muts": ["T361C"], "aa_muts": {"SigPep": [], "HA1": ["Y105H"], "HA2": []}, "yvalue": 176.0, "attr": {"num_date_confidence": [2017.602327173169, 2017.602327173169], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.432755882120805, "strain": "A/Niigata/767/2017", "num_date": 2017.602327173169, "lbi": 0.13991314367695495, "ep": 9, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1057896", "division": "niigata", "avg_age": 42.607142857142854, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2017-08-09", "gender": "female", "region": "japan_korea", "raw_date": "2017-08-09", "country": "japan", "div": 0.018275896237242652, "age": 10, "clade_membership": "A3"}}], "yvalue": 176.5, "attr": {"num_date": 2017.376167287121, "num_date_confidence": [2017.121431827145, 2017.3997262149212], "region_confidence": {"china": 0.9999640468808675}, "region": "china", "age_score": 1.432755882120805, "region_entropy": 0.00018190541958709004, "ne": 5, "glyc": 11, "num_gender": 0.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.2135915366747175, "div": 0.017686836769635533, "age": 15.0, "ep": 9, "clade_membership": "A3"}}], "yvalue": 177.25, "attr": {"num_date": 2017.1639188132228, "num_date_confidence": [2016.9468429666247, 2017.327634554198], "region_confidence": {"china": 0.9999254324962026}, "region": "china", "age_score": 1.432755882120805, "region_entropy": 0.0003584295811148121, "ne": 5, "glyc": 11, "num_gender": 0.3333333333333333, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.2802931129815518, "div": 0.017686836716731224, "age": 13.0, "ep": 9, "clade_membership": "A3"}}, {"xvalue": 0.01474, "tvalue": 5.21839, "clade": 174, "strain": "NODE_0000299", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0165, "tvalue": 5.79903, "clade": 175, "strain": "A/Bremen/26/2017", "muts": ["G471A", "T696C", "A826G"], "aa_muts": {"SigPep": [], "HA1": ["I260V"], "HA2": []}, "yvalue": 175.0, "attr": {"num_date_confidence": [2017.0985626283368, 2017.0985626283368], "region_confidence": {"europe": 1.0}, "age_score": 1.432755882120805, "strain": "A/Bremen/26/2017", "num_date": 2017.0985626283368, "lbi": 0.15788444289505427, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI975616", "division": "bremen", "avg_age": 42.607142857142854, "authors": "robert_koch_institute", "date": "2017-02-06", "gender": "male", "region": "europe", "raw_date": "2017-02-06", "country": "germany", "div": 0.016504795902510274, "age": 2, "clade_membership": "A3"}}, {"xvalue": 0.01474, "tvalue": 5.32726, "clade": 176, "strain": "NODE_0000300", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 5.67514, "clade": 177, "strain": "A/Jordan/20170020037/2016", "muts": ["T270C", "A290G"], "aa_muts": {"SigPep": [], "HA1": ["N81S"], "HA2": []}, "yvalue": 174.0, "attr": {"num_date_confidence": [2016.974674880219, 2016.974674880219], "region_confidence": {"west_asia": 1.0}, "age_score": 1.432755882120805, "strain": "A/Jordan/20170020037/2016", "num_date": 2016.974674880219, "lbi": 0.1356366793557996, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI1036079", "division": "jordan", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-12-22", "gender": "?", "region": "west_asia", "raw_date": "2016-12-22", "country": "jordan", "div": 0.01591505797379978, "age": "unknown", "clade_membership": "A3"}}, {"xvalue": 0.01474, "tvalue": 5.37661, "clade": 178, "strain": "NODE_0000301", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01533, "tvalue": 5.52182, "clade": 179, "strain": "A/Kanagawa/ZC1601/2016", "muts": ["C966A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 173.0, "attr": {"num_date_confidence": [2016.8213552361397, 2016.8213552361397], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.432755882120805, "strain": "A/Kanagawa/ZC1601/2016", "num_date": 2016.8213552361397, "lbi": 0.1989948501708658, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI860536", "division": "kanagawa", "avg_age": 42.607142857142854, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-10-27", "gender": "female", "region": "japan_korea", "raw_date": "2016-10-27", "country": "japan", "div": 0.015326024682228653, "age": 8, "clade_membership": "A3"}}, {"xvalue": 0.01474, "tvalue": 5.43694, "clade": 180, "strain": "NODE_0000302", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01533, "tvalue": 5.53551, "clade": 181, "strain": "A/Phetchaburi/408/2016", "muts": ["G120A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 172.0, "attr": {"num_date_confidence": [2016.8350444900752, 2016.8350444900752], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.432755882120805, "strain": "A/Phetchaburi/408/2016", "num_date": 2016.8350444900752, "lbi": 0.1922998381637701, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI925055", "division": "phetchaburi", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2016-11-01", "gender": "female", "region": "southeast_asia", "raw_date": "2016-11-01", "country": "thailand", "div": 0.015325947005512586, "age": 51, "clade_membership": "A3"}}, {"xvalue": 0.01474, "tvalue": 5.43694, "clade": 182, "strain": "A/Lao/3008/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 171.0, "attr": {"num_date_confidence": [2016.7364818617386, 2016.7364818617386], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.432755882120805, "strain": "A/Lao/3008/2016", "num_date": 2016.7364818617386, "lbi": 0.24603219020260783, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI870211", "division": "laos", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2016-09-26", "gender": "female", "region": "southeast_asia", "raw_date": "2016-09-26", "country": "laos", "div": 0.014737101595101079, "age": 61, "clade_membership": "A3"}}], "yvalue": 171.5, "attr": {"num_date": 2016.7364818617386, "num_date_confidence": [2016.6507566317805, 2016.7364818617386], "region_confidence": {"southeast_asia": 0.9999999337359703}, "region": "southeast_asia", "age_score": 1.432755882120805, "region_entropy": 5.208541356133793e-07, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.24603219020260783, "div": 0.014737101542196769, "age": 56.0, "ep": 6, "clade_membership": "A3"}}], "yvalue": 172.25, "attr": {"num_date": 2016.676145597475, "num_date_confidence": [2016.5777030355064, 2016.7299799947036], "region_confidence": {"japan_korea": 0.15752114037930984, "west_asia": 0.4632569887314686, "southeast_asia": 0.37914491841283554}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 0.44131920142219305, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.2860890261174102, "div": 0.01473710148929246, "age": 40.0, "ep": 6, "clade_membership": "A3"}}], "yvalue": 173.125, "attr": {"num_date": 2016.626800920972, "num_date_confidence": [2016.4990302210515, 2016.7030945761244], "region_confidence": {"west_asia": 0.9995741584034286}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 0.0017916383820778634, "ne": 5, "glyc": 12, "num_gender": 0.75, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.3236506630879066, "div": 0.01473710143638815, "age": 40.0, "ep": 6, "clade_membership": "A3"}}], "yvalue": 174.0625, "attr": {"num_date": 2016.517928546084, "num_date_confidence": [2016.411458955642, 2016.6620676246189], "region_confidence": {"west_asia": 0.9997113739984864}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 0.0013064893724307552, "ne": 5, "glyc": 12, "num_gender": 0.4, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.42489652597638844, "div": 0.014737101383483841, "age": 30.5, "ep": 6, "clade_membership": "A3"}}], "yvalue": 175.65625, "attr": {"num_date": 2016.446220010548, "num_date_confidence": [2016.2974750724572, 2016.597023844022], "region_confidence": {"west_asia": 0.9998468567085864}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 0.0007443961616934611, "ne": 5, "glyc": 12, "num_gender": 0.375, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.47763840258835355, "div": 0.014737101330579531, "age": 23.0, "ep": 6, "clade_membership": "A3"}}, {"xvalue": 0.01592, "tvalue": 5.23563, "clade": 183, "strain": "NODE_0000203", "muts": ["A412G", "G833A"], "aa_muts": {"SigPep": [], "HA1": ["N122D", "S262N"], "HA2": []}, "children": [{"xvalue": 0.01827, "tvalue": 5.92497, "clade": 184, "strain": "A/SaudiArabia/256339/2017", "muts": ["T18G", "A519G", "A1437G", "T1515C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 170.0, "attr": {"num_date_confidence": [2017.2245037645448, 2017.2245037645448], "region_confidence": {"west_asia": 1.0}, "age_score": 1.432755882120805, "strain": "A/SaudiArabia/256339/2017", "num_date": 2017.2245037645448, "lbi": 0.15567702564996047, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1050885", "division": "saudi_arabia", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2017-03-24", "gender": "male", "region": "west_asia", "raw_date": "2017-03-24", "country": "saudi_arabia", "div": 0.018273420412336372, "age": 60, "clade_membership": "A3"}}, {"xvalue": 0.0165, "tvalue": 5.39588, "clade": 185, "strain": "NODE_0000204", "muts": ["T987C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01946, "tvalue": 5.75248, "clade": 186, "strain": "A/Tunisia/746/2017", "muts": ["A189G", "C1047T", "A1279G", "C1293T", "G1633C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["K82E", "V200L"]}, "yvalue": 169.0, "attr": {"num_date_confidence": [2017.0520191649555, 2017.0520191649555], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/Tunisia/746/2017", "num_date": 2017.0520191649555, "lbi": 0.19472224145941194, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "undetermined", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI991786", "division": "tunisia", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2017-01-20", "gender": "female", "region": "africa", "raw_date": "2017-01-20", "country": "tunisia", "div": 0.019457935852519606, "age": 51, "clade_membership": "A3"}}, {"xvalue": 0.01886, "tvalue": 5.74974, "clade": 187, "strain": "A/SouthAustralia/19/2017", "muts": ["G193A", "C699A", "A999T", "G1089A"], "aa_muts": {"SigPep": [], "HA1": ["G49S"], "HA2": []}, "yvalue": 168.0, "attr": {"num_date_confidence": [2017.0492813141684, 2017.0492813141684], "region_confidence": {"oceania": 1.0}, "age_score": 1.432755882120805, "strain": "A/SouthAustralia/19/2017", "num_date": 2017.0492813141684, "lbi": 0.19605961425225174, "ep": 8, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI919186", "division": "south_australia", "avg_age": 42.607142857142854, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2017-01-19", "gender": "female", "region": "oceania", "raw_date": "2017-01-19", "country": "australia", "div": 0.018863693313035983, "age": "unknown", "clade_membership": "A3"}}, {"xvalue": 0.0165, "tvalue": 5.39588, "clade": 188, "strain": "A/SaudiArabia/192152/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 167.0, "attr": {"num_date_confidence": [2016.6954140999314, 2016.6954140999314], "region_confidence": {"west_asia": 1.0}, "age_score": 1.432755882120805, "strain": "A/SaudiArabia/192152/2016", "num_date": 2016.6954140999314, "lbi": 0.47489171181859197, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI867196", "division": "saudi_arabia", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2016-09-11", "gender": "male", "region": "west_asia", "raw_date": "2016-09-11", "country": "saudi_arabia", "div": 0.016503964702877866, "age": 69, "clade_membership": "A3"}}, {"xvalue": 0.01827, "tvalue": 5.81744, "clade": 189, "strain": "NODE_0000207", "muts": ["A474G", "C884A", "C984T"], "aa_muts": {"SigPep": [], "HA1": ["S279Y"], "HA2": []}, "children": [{"xvalue": 0.01886, "tvalue": 5.92497, "clade": 190, "strain": "A/Tanzania/748/2017", "muts": ["C763T"], "aa_muts": {"SigPep": [], "HA1": ["P239S"], "HA2": []}, "yvalue": 166.0, "attr": {"num_date_confidence": [2017.2245037645448, 2017.2245037645448], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/Tanzania/748/2017", "num_date": 2017.2245037645448, "lbi": 0.19954004361750535, "ep": 9, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1016637", "division": "tanzania", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2017-03-24", "gender": "female", "region": "africa", "raw_date": "2017-03-24", "country": "tanzania", "div": 0.01886071861833437, "age": 50, "clade_membership": "A3"}}, {"xvalue": 0.01827, "tvalue": 5.95508, "clade": 191, "strain": "A/Tanzania/2460/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 165.0, "attr": {"num_date_confidence": [2017.2546201232033, 2017.2546201232033], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/Tanzania/2460/2017", "num_date": 2017.2546201232033, "lbi": 0.18837615955563544, "ep": 9, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1016581", "division": "tanzania", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2017-04-04", "gender": "female", "region": "africa", "raw_date": "2017-04-04", "country": "tanzania", "div": 0.018271893923660718, "age": 50, "clade_membership": "A3"}}], "yvalue": 165.5, "attr": {"num_date": 2017.1169788625466, "num_date_confidence": [2016.9666924645894, 2017.2085571913622], "region_confidence": {"africa": 0.9999872175228975}, "region": "africa", "age_score": 1.432755882120805, "region_entropy": 6.816749093970462e-05, "ne": 5, "glyc": 11, "num_gender": 1.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.2538440486763796, "div": 0.01827189387075641, "age": 50.0, "ep": 9, "clade_membership": "A3"}}, {"xvalue": 0.0165, "tvalue": 5.48639, "clade": 192, "strain": "NODE_0000303", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 6.18506, "clade": 193, "strain": "A/Antsirabe/2961/2017", "muts": ["G320A", "G1416A"], "aa_muts": {"SigPep": [], "HA1": ["S91N"], "HA2": []}, "yvalue": 164.0, "attr": {"num_date_confidence": [2017.4845995893224, 2017.4845995893224], "region_confidence": {"africa": 1.0}, "age_score": 1.432755882120805, "strain": "A/Antsirabe/2961/2017", "num_date": 2017.4845995893224, "lbi": 0.14541455909188833, "ep": 9, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1042914", "division": "vakinankaratra", "avg_age": 42.607142857142854, "authors": "crick_worldwide_influenza_centre", "date": "2017-06-27", "gender": "male", "region": "africa", "raw_date": "2017-06-27", "country": "madagascar", "div": 0.01768202070897255, "age": "unknown", "clade_membership": "A3"}}, {"xvalue": 0.0165, "tvalue": 5.7032, "clade": 194, "strain": "NODE_0000304", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0165, "tvalue": 5.7032, "clade": 195, "strain": "A/Kyrgyzstan/627/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 163.0, "attr": {"num_date_confidence": [2017.002737850787, 2017.002737850787], "region_confidence": {"west_asia": 1.0}, "age_score": 1.432755882120805, "strain": "A/Kyrgyzstan/627/2017", "num_date": 2017.002737850787, "lbi": 0.3291784233162911, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1016850", "division": "kyrgyzstan", "avg_age": 42.607142857142854, "authors": "centers_for_disease_control_and_prevention", "date": "2017-01-02", "gender": "male", "region": "west_asia", "raw_date": "2017-01-02", "country": "kyrgyzstan", "div": 0.016503964808686485, "age": 16, "clade_membership": "A3"}}, {"xvalue": 0.01709, "tvalue": 6.35755, "clade": 196, "strain": "A/Finland/788/2017", "muts": ["A768G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 162.0, "attr": {"num_date_confidence": [2017.6570841889118, 2017.6570841889118], "region_confidence": {"europe": 1.0}, "age_score": 1.432755882120805, "strain": "A/Finland/788/2017", "num_date": 2017.6570841889118, "lbi": 0.1286563575075579, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "undetermined", "glyc": 11, "num_gender": 0, "rb": 2, "isolate_id": "EPI1060949", "division": "finland", "avg_age": 42.607142857142854, "authors": "national_institute_for_health_and_welfare", "date": "2017-08-29", "gender": "?", "region": "europe", "raw_date": "2017-08-29", "country": "finland", "div": 0.0170926810408985, "age": "unknown", "clade_membership": "A3"}}], "yvalue": 162.5, "attr": {"num_date": 2017.002737850787, "num_date_confidence": [2016.8437093831078, 2017.002737850787], "region_confidence": {"west_asia": 0.9999998892413613}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 8.520053103461343e-07, "ne": 5, "glyc": 11, "num_gender": -0.5, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.3291784233162911, "div": 0.016503964755782176, "age": 16.0, "ep": 8, "clade_membership": "A3"}}], "yvalue": 163.25, "attr": {"num_date": 2016.7859278451674, "num_date_confidence": [2016.6907587008102, 2016.9654210742053], "region_confidence": {"west_asia": 0.9999272957597084}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 0.0003325941272302505, "ne": 5, "glyc": 11, "num_gender": -0.6666666666666666, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.4448475572824571, "div": 0.016503964702877866, "age": 16.0, "ep": 8, "clade_membership": "A3"}}], "yvalue": 166.55, "attr": {"num_date": 2016.6954140999314, "num_date_confidence": [2016.6182861436644, 2016.6954140999314], "region_confidence": {"west_asia": 0.9999375413755962}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 0.0002897261307585341, "ne": 5, "glyc": 11, "num_gender": 0.125, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.47489171181859197, "div": 0.016503964649973557, "age": 47.2, "ep": 8, "clade_membership": "A3"}}], "yvalue": 168.275, "attr": {"num_date": 2016.535163886459, "num_date_confidence": [2016.4354277028185, 2016.661019323621], "region_confidence": {"west_asia": 0.999996911005859}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 1.836253941759034e-05, "ne": 5, "glyc": 11, "num_gender": 0.0, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.49587365867335176, "div": 0.015915180941620838, "age": 49.333333333333336, "ep": 8, "clade_membership": "A3"}}], "yvalue": 176.79531, "attr": {"num_date": 2016.38901161381, "num_date_confidence": [2016.1789083502483, 2016.4531745355166], "region_confidence": {"west_asia": 0.9999962847338028}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 2.1787686255122996e-05, "ne": 5, "glyc": 12, "num_gender": 0.21739130434782608, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.49577910041846074, "div": 0.014737101277675222, "age": 36.75, "ep": 6, "clade_membership": "A3"}}], "yvalue": 181.14766, "attr": {"num_date": 2016.102967143105, "num_date_confidence": [2015.7649226701976, 2016.241696697505], "region_confidence": {"west_asia": 0.9992962631729339}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 0.002711893446467237, "ne": 5, "clade_annotation": "A3", "glyc": 12, "num_gender": 0.28, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.34565877853664667, "div": 0.012969195503634418, "age": 39.5, "ep": 6, "clade_membership": "A3"}}], "yvalue": 184.07383, "attr": {"num_date": 2015.304410402201, "num_date_confidence": [2014.9633056512332, 2015.4257373546777], "region_confidence": {"west_asia": 0.9991595805029277}, "region": "west_asia", "age_score": 1.432755882120805, "region_entropy": 0.0033833721149319506, "ne": 5, "glyc": 12, "num_gender": 0.3076923076923077, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.2327986600512742, "div": 0.01120114295005228, "age": 40.89473684210526, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 189.25566, "attr": {"num_date": 2014.938036499325, "num_date_confidence": [2014.6952607202754, 2015.080283574797], "region_confidence": {"west_asia": 0.17701772548840403, "oceania": 0.5256528487702411, "south_america": 0.084376210610168, "north_america": 0.21268302231495104}, "region": "oceania", "age_score": 1.432755882120805, "region_entropy": 0.5146709631651699, "ne": 5, "glyc": 12, "num_gender": 0.14285714285714285, "avg_age": 42.607142857142854, "rb": 2, "lbi": 0.2421081339216577, "div": 0.010612068201322204, "age": 42.607142857142854, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 202.6651, "attr": {"num_date": 2014.6242157605132, "num_date_confidence": [2014.2965398090191, 2014.8832091134686], "region_confidence": {"oceania": 0.2473135182458195, "north_america": 0.7521228012414224}, "region": "north_america", "age_score": 1.032799050654641, "region_entropy": 0.2453422677763886, "ne": 5, "glyc": 12, "num_gender": 0.1864406779661017, "avg_age": 37.97826086956522, "rb": 2, "lbi": 0.27973501213206275, "div": 0.010612068148417895, "age": 37.97826086956522, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.0112, "tvalue": 3.32563, "clade": 197, "strain": "NODE_0000158", "muts": ["A1197G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 3.57658, "clade": 198, "strain": "A/NewJersey/26/2014", "muts": ["T18C", "T57A", "G205A"], "aa_muts": {"SigPep": [], "HA1": ["D53N"], "HA2": []}, "yvalue": 161.0, "attr": {"num_date_confidence": [2014.8761122518822, 2014.8761122518822], "region_confidence": {"north_america": 1.0}, "age_score": 1.6040252168088562, "strain": "A/NewJersey/26/2014", "num_date": 2014.8761122518822, "lbi": 0.18731798289969195, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI552913", "division": "new_jersey", "avg_age": 30.471333333333337, "authors": "centers_for_disease_control_and_prevention", "date": "2014-11-17", "gender": "male", "region": "north_america", "raw_date": "2014-11-17", "country": "usa", "div": 0.012969192056298241, "age": 7, "clade_membership": "3c2.A"}}, {"xvalue": 0.01179, "tvalue": 3.62268, "clade": 199, "strain": "NODE_0000136", "muts": ["C172T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 3.79632, "clade": 200, "strain": "NODE_0000133", "muts": ["T388A", "T1692C"], "aa_muts": {"SigPep": [], "HA1": ["S114T"], "HA2": []}, "children": [{"xvalue": 0.01828, "tvalue": 4.39668, "clade": 201, "strain": "NODE_0000135", "muts": ["G294A", "T345C", "A466C", "C690A", "C921T", "A939G", "G990A", "T1198C", "G1269A"], "aa_muts": {"SigPep": [], "HA1": ["I140L"], "HA2": []}, "children": [{"xvalue": 0.01946, "tvalue": 4.57658, "clade": 202, "strain": "A/CoteDIvoire/1998/2015", "muts": ["G84A", "A1083T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 160.0, "attr": {"num_date_confidence": [2015.8761122518822, 2015.8761122518822], "region_confidence": {"africa": 1.0}, "age_score": 1.4227413234801665, "strain": "A/CoteDIvoire/1998/2015", "num_date": 2015.8761122518822, "lbi": 0.038607615002611555, "ep": 6, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI730082", "division": "cote_d_ivoire", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-11-17", "gender": "female", "region": "africa", "raw_date": "2015-11-17", "country": "cote_d_ivoire", "div": 0.019462898404131523, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01887, "tvalue": 4.43968, "clade": 203, "strain": "A/BurkinaFaso/CMA3092/2015", "muts": ["C1637T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["A201V"]}, "yvalue": 159.0, "attr": {"num_date_confidence": [2015.7392197125257, 2015.7392197125257], "region_confidence": {"africa": 1.0}, "age_score": 1.4227413234801665, "strain": "A/BurkinaFaso/CMA3092/2015", "num_date": 2015.7392197125257, "lbi": 0.05436284288393668, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI1020106", "division": "burkina_faso", "avg_age": 30.660618279569896, "authors": "luxembourg_institute_of_health", "date": "2015-09-28", "gender": "?", "region": "africa", "raw_date": "2015-09-28", "country": "burkina_faso", "div": 0.0188730185747168, "age": "unknown", "clade_membership": "3c2.A"}}], "yvalue": 159.5, "attr": {"num_date": 2015.6962188611276, "num_date_confidence": [2015.5397597798108, 2015.7323684187793], "region_confidence": {"africa": 0.9999960393654116}, "region": "africa", "age_score": 1.4227413234801665, "region_entropy": 2.4679773374860214e-05, "ne": 6, "glyc": 12, "num_gender": 0.5, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.06053265755880324, "div": 0.018284264356335154, "age": "unknown", "ep": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.0018, "clade": 204, "strain": "NODE_0000305", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 4.2672, "clade": 205, "strain": "A/Hangzhou/A607/2015", "muts": ["C411A", "A1382G"], "aa_muts": {"SigPep": [], "HA1": ["N121K"], "HA2": ["N116S"]}, "yvalue": 158.0, "attr": {"num_date_confidence": [2015.5667351129364, 2015.5667351129364], "region_confidence": {"china": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Hangzhou/A607/2015", "num_date": 2015.5667351129364, "lbi": 0.08367099517113483, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI670287", "division": "zhejiang", "avg_age": 30.660618279569896, "authors": "hangzhou_center_for_disease_control_and_prevention", "date": "2015-07-27", "gender": "?", "region": "china", "raw_date": "2015-07-27", "country": "china", "div": 0.014146054988545528, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01415, "tvalue": 4.32469, "clade": 206, "strain": "A/Saitama/34/2015", "muts": ["C396A", "G1551A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 157.0, "attr": {"num_date_confidence": [2015.624229979466, 2015.624229979466], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Saitama/34/2015", "num_date": 2015.624229979466, "lbi": 0.07246873430752881, "ep": 5, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI670317", "division": "saitama", "avg_age": 30.660618279569896, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-08-17", "gender": "female", "region": "japan_korea", "raw_date": "2015-08-17", "country": "japan", "div": 0.014146172872229034, "age": 20, "clade_membership": "3c2.A"}}], "yvalue": 157.5, "attr": {"num_date": 2015.3013341898231, "num_date_confidence": [2015.073996171411, 2015.4423198205895], "region_confidence": {"japan_korea": 0.3040465768278274, "china": 0.40713043859861897, "africa": 0.06472808268200836, "north_america": 0.22387255738356635}, "region": "china", "age_score": 1.4227413234801665, "region_entropy": 0.53955722971311, "ne": 6, "glyc": 12, "num_gender": 0.5, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.16245396868680992, "div": 0.012968113265591935, "age": 20.0, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 158.5, "attr": {"num_date": 2015.0958561264335, "num_date_confidence": [2014.903183783956, 2015.2855481021625], "region_confidence": {"japan_korea": 0.12037830044469217, "china": 0.1836553357432034, "africa": 0.1560142066596618, "north_america": 0.5397283442084744}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 0.51727170051529, "ne": 6, "glyc": 12, "num_gender": 0.5, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.27153467578374496, "div": 0.012968113212687626, "age": 20.0, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 3.64102, "clade": 207, "strain": "NODE_0000137", "muts": ["C1317T", "A1560G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01711, "tvalue": 4.24803, "clade": 208, "strain": "A/SaoPaulo/3-35911/2015", "muts": ["G95A", "C97G", "A105G", "A132T", "A136C", "C884T", "T1515C", "deletion 53-55"], "aa_muts": {"SigPep": [], "HA1": ["K2X", "I3X", "G16E", "H17D", "T30P", "S279F"], "HA2": []}, "yvalue": 156.0, "attr": {"num_date_confidence": [2015.5475701574264, 2015.5475701574264], "region_confidence": {"south_america": 1.0}, "age_score": 1.4227413234801665, "strain": "A/SaoPaulo/3-35911/2015", "num_date": 2015.5475701574264, "lbi": 0.08777746220746008, "ep": 6, "region_entropy": -0.0, "ne": 9, "passage": "egg", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI642353", "division": "sao_paulo", "avg_age": 30.660618279569896, "authors": "instituto_adolfo_lutz", "date": "2015-07-20", "gender": "male", "region": "south_america", "raw_date": "2015-07-20", "country": "brazil", "div": 0.017114090900998587, "age": 65, "clade_membership": "3c2.A"}}, {"xvalue": 0.01415, "tvalue": 3.86092, "clade": 209, "strain": "NODE_0000149", "muts": ["G830T", "G1080A"], "aa_muts": {"SigPep": [], "HA1": ["R261L"], "HA2": []}, "children": [{"xvalue": 0.0165, "tvalue": 4.39314, "clade": 210, "strain": "A/Peru/72/2015", "muts": ["A472G", "T696C", "C1203T", "T1620C"], "aa_muts": {"SigPep": [], "HA1": ["R142G"], "HA2": []}, "yvalue": 155.0, "attr": {"num_date_confidence": [2015.6926762491444, 2015.6926762491444], "region_confidence": {"south_america": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Peru/72/2015", "num_date": 2015.6926762491444, "lbi": 0.061071147912043, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI695562", "division": "peru", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-09-11", "gender": "female", "region": "south_america", "raw_date": "2015-09-11", "country": "peru", "div": 0.016504464227774213, "age": 46, "clade_membership": "3c2.A"}}, {"xvalue": 0.01532, "tvalue": 4.00163, "clade": 211, "strain": "A/Wisconsin/66/2015", "muts": ["C527A", "C1308T"], "aa_muts": {"SigPep": [], "HA1": ["T160K"], "HA2": []}, "yvalue": 154.0, "attr": {"num_date_confidence": [2015.3011635865846, 2015.3011635865846], "region_confidence": {"north_america": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Wisconsin/66/2015", "num_date": 2015.3011635865846, "lbi": 0.16252327139776807, "ep": 6, "region_entropy": -0.0, "ne": 4, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI624328", "division": "wisconsin", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-04-21", "gender": "female", "region": "north_america", "raw_date": "2015-04-21", "country": "usa", "div": 0.0153248374901736, "age": 72, "clade_membership": "3c2.A"}}], "yvalue": 154.5, "attr": {"num_date": 2015.160460500273, "num_date_confidence": [2015.0570702074913, 2015.2643888059101], "region_confidence": {"north_america": 0.991095498990641}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 0.022108064813491618, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.23103724144332935, "div": 0.014146197112156839, "age": 59.0, "ep": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.01474, "tvalue": 4.03554, "clade": 212, "strain": "NODE_0000140", "muts": ["G1323A", "G1416A", "A1536G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02005, "tvalue": 4.68883, "clade": 213, "strain": "A/Colombia/7207/2015", "muts": ["C12A", "T159C", "A231G", "C543T", "A1281G", "A1485G", "G1518A", "A1591G", "C1594T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["I186V"]}, "yvalue": 153.0, "attr": {"num_date_confidence": [2015.9883641341546, 2015.9883641341546], "region_confidence": {"south_america": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Colombia/7207/2015", "num_date": 2015.9883641341546, "lbi": 0.029160639312382233, "ep": 5, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI711051", "division": "colombia", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-12-28", "gender": "male", "region": "south_america", "raw_date": "2015-12-28", "country": "colombia", "div": 0.02005178057796267, "age": 26, "clade_membership": "3c2.A"}}, {"xvalue": 0.01474, "tvalue": 4.12678, "clade": 214, "strain": "NODE_0000306", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0165, "tvalue": 4.65323, "clade": 215, "strain": "A/Victoria/455/2015", "muts": ["C522A", "A753G", "A1152G"], "aa_muts": {"SigPep": [], "HA1": ["N158K"], "HA2": []}, "yvalue": 152.0, "attr": {"num_date_confidence": [2015.952772073922, 2015.952772073922], "region_confidence": {"oceania": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Victoria/455/2015", "num_date": 2015.952772073922, "lbi": 0.03187429806591337, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 3, "isolate_id": "EPI704175", "division": "victoria", "avg_age": 30.660618279569896, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2015-12-15", "gender": "female", "region": "oceania", "raw_date": "2015-12-15", "country": "australia", "div": 0.016503431150045142, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01591, "tvalue": 4.60395, "clade": 216, "strain": "NODE_0000142", "muts": ["G603A", "A1083G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0165, "tvalue": 4.69704, "clade": 217, "strain": "A/California/137/2015", "muts": ["G1205A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["G57E"]}, "yvalue": 151.0, "attr": {"num_date_confidence": [2015.996577686516, 2015.996577686516], "region_confidence": {"north_america": 1.0}, "age_score": 1.4227413234801665, "strain": "A/California/137/2015", "num_date": 2015.996577686516, "lbi": 0.028567964004266134, "ep": 5, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI747552", "division": "california", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-12-31", "gender": "female", "region": "north_america", "raw_date": "2015-12-31", "country": "usa", "div": 0.016502418754999516, "age": 50, "clade_membership": "3c2.A"}}, {"xvalue": 0.01591, "tvalue": 4.60395, "clade": 218, "strain": "A/Arizona/29/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 150.0, "attr": {"num_date_confidence": [2015.9034907597536, 2015.9034907597536], "region_confidence": {"north_america": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Arizona/29/2015", "num_date": 2015.9034907597536, "lbi": 0.03605347551242338, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI686278", "division": "arizona", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-11-27", "gender": "female", "region": "north_america", "raw_date": "2015-11-27", "country": "usa", "div": 0.01591353864730752, "age": 68, "clade_membership": "3c2.A"}}], "yvalue": 150.5, "attr": {"num_date": 2015.9034907597536, "num_date_confidence": [2015.7329973932674, 2015.9034907597536], "region_confidence": {"north_america": 0.9999999998989673}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 1.0739837893353076e-09, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.03605347551242338, "div": 0.015913538594403212, "age": 59.0, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 151.25, "attr": {"num_date": 2015.426315987079, "num_date_confidence": [2015.2939469925905, 2015.6643461205124], "region_confidence": {"north_america": 0.9920782176688377}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 0.021620178120092367, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.11885927126484365, "div": 0.014735389434768466, "age": 59.0, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 152.125, "attr": {"num_date": 2015.3350815843287, "num_date_confidence": [2015.1624066327913, 2015.5060240343514], "region_confidence": {"north_america": 0.9908440726509258}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 0.022918761551372447, "ne": 5, "glyc": 12, "num_gender": 0.5, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.14931022758135526, "div": 0.014735389381864156, "age": 48.0, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 3.79376, "clade": 219, "strain": "NODE_0000307", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 4.12497, "clade": 220, "strain": "NODE_0000143", "muts": ["T195A", "A1485C", "C1539T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01533, "tvalue": 4.28636, "clade": 221, "strain": "A/Ohio/24/2015", "muts": ["G294A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 149.0, "attr": {"num_date_confidence": [2015.5859000684463, 2015.5859000684463], "region_confidence": {"north_america": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Ohio/24/2015", "num_date": 2015.5859000684463, "lbi": 0.07975663976684298, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI649763", "division": "ohio", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-08-03", "gender": "female", "region": "north_america", "raw_date": "2015-08-03", "country": "usa", "div": 0.015325392900697588, "age": 67, "clade_membership": "3c2.A"}}, {"xvalue": 0.01533, "tvalue": 4.21792, "clade": 222, "strain": "A/Alaska/121/2015", "muts": ["G1524A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 148.0, "attr": {"num_date_confidence": [2015.517453798768, 2015.517453798768], "region_confidence": {"north_america": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Alaska/121/2015", "num_date": 2015.517453798768, "lbi": 0.0946414621983037, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI695974", "division": "alaska", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-07-09", "gender": "female", "region": "north_america", "raw_date": "2015-07-09", "country": "usa", "div": 0.015325392900697588, "age": 13, "clade_membership": "3c2.A"}}, {"xvalue": 0.01533, "tvalue": 4.21792, "clade": 223, "strain": "A/Tasmania/29/2015", "muts": ["G1700A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 147.0, "attr": {"num_date_confidence": [2015.517453798768, 2015.517453798768], "region_confidence": {"oceania": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Tasmania/29/2015", "num_date": 2015.517453798768, "lbi": 0.0946414621983037, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI652493", "division": "tasmania", "avg_age": 30.660618279569896, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2015-07-09", "gender": "male", "region": "oceania", "raw_date": "2015-07-09", "country": "australia", "div": 0.015325392900697588, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01474, "tvalue": 4.37397, "clade": 224, "strain": "NODE_0000308", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 4.51634, "clade": 225, "strain": "A/Fukuoka-C/16/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 146.0, "attr": {"num_date_confidence": [2015.8158795345653, 2015.8158795345653], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Fukuoka-C/16/2015", "num_date": 2015.8158795345653, "lbi": 0.04488175344881547, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI678215", "division": "fukuoka", "avg_age": 30.660618279569896, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-10-26", "gender": "female", "region": "japan_korea", "raw_date": "2015-10-26", "country": "japan", "div": 0.014736571527218264, "age": 9, "clade_membership": "3c2.A"}}, {"xvalue": 0.01474, "tvalue": 4.37397, "clade": 226, "strain": "A/England/333/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 145.0, "attr": {"num_date_confidence": [2015.6735112936344, 2015.6735112936344], "region_confidence": {"europe": 1.0}, "age_score": 1.4227413234801665, "strain": "A/England/333/2015", "num_date": 2015.6735112936344, "lbi": 0.06406844291562706, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI676530", "division": "england", "avg_age": 30.660618279569896, "authors": "crick_worldwide_influenza_centre", "date": "2015-09-04", "gender": "male", "region": "europe", "raw_date": "2015-09-04", "country": "united_kingdom", "div": 0.014736571527218264, "age": 84, "clade_membership": "3c2.A"}}], "yvalue": 145.5, "attr": {"num_date": 2015.6735112936344, "num_date_confidence": [2015.4812516015386, 2015.6735112936344], "region_confidence": {"europe": 0.998021571540319}, "region": "europe", "age_score": 1.4227413234801665, "region_entropy": 0.006772768588750592, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.06406844291562706, "div": 0.014736571474313955, "age": 46.5, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 147.375, "attr": {"num_date": 2015.4245067936702, "num_date_confidence": [2015.3343056730444, 2015.4829611017576], "region_confidence": {"north_america": 0.9999955200792496}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 2.6968615910286226e-05, "ne": 5, "glyc": 12, "num_gender": 0.2, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.11939808739993298, "div": 0.014736571421409645, "age": 43.25, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 3.8526, "clade": 227, "strain": "NODE_0000309", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.58834, "clade": 228, "strain": "NODE_0000150", "muts": ["C411G", "A472G", "G833A", "G1278A", "A1374G"], "aa_muts": {"SigPep": [], "HA1": ["N121K", "R142G", "S262N"], "HA2": []}, "children": [{"xvalue": 0.01828, "tvalue": 5.33291, "clade": 229, "strain": "A/Mie/27/2016", "muts": ["T9C", "C393T", "A824G", "A876C"], "aa_muts": {"SigPep": [], "HA1": ["K259R", "K276N"], "HA2": []}, "yvalue": 144.0, "attr": {"num_date_confidence": [2016.6324435318274, 2016.6324435318274], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Mie/27/2016", "num_date": 2016.6324435318274, "lbi": 0.005827693738942716, "ep": 9, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI854226", "division": "mie", "avg_age": 30.660618279569896, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-08-19", "gender": "female", "region": "japan_korea", "raw_date": "2016-08-19", "country": "japan", "div": 0.018279505522344253, "age": 24, "clade_membership": "3c2.A"}}, {"xvalue": 0.01651, "tvalue": 4.80809, "clade": 230, "strain": "NODE_0000151", "muts": ["A63G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01887, "tvalue": 5.33017, "clade": 231, "strain": "A/Vietnam/6032/2016", "muts": ["T41C", "C476A", "A1209G", "T1329C"], "aa_muts": {"SigPep": ["V14A"], "HA1": ["S143Y"], "HA2": []}, "yvalue": 143.0, "attr": {"num_date_confidence": [2016.6297056810404, 2016.6297056810404], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Vietnam/6032/2016", "num_date": 2016.6297056810404, "lbi": 0.005867718951229982, "ep": 9, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI976551", "division": "vietnam", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2016-08-18", "gender": "female", "region": "southeast_asia", "raw_date": "2016-08-18", "country": "vietnam", "div": 0.01886783978977129, "age": 53, "clade_membership": "3c2.A"}}, {"xvalue": 0.01769, "tvalue": 5.08924, "clade": 232, "strain": "A/Vietnam/6029/2016", "muts": ["G120A", "T187A"], "aa_muts": {"SigPep": [], "HA1": ["S47T"], "HA2": []}, "yvalue": 142.0, "attr": {"num_date_confidence": [2016.3887748117727, 2016.3887748117727], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Vietnam/6029/2016", "num_date": 2016.3887748117727, "lbi": 0.010716591383766008, "ep": 9, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI976460", "division": "vietnam", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2016-05-22", "gender": "female", "region": "southeast_asia", "raw_date": "2016-05-22", "country": "vietnam", "div": 0.01768880963823392, "age": 1, "clade_membership": "3c2.A"}}], "yvalue": 142.5, "attr": {"num_date": 2016.1076294715995, "num_date_confidence": [2015.9218207850902, 2016.2811457866471], "region_confidence": {"southeast_asia": 0.9999110092073494}, "region": "southeast_asia", "age_score": 1.4227413234801665, "region_entropy": 0.00043887053850366994, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.02164244618540912, "div": 0.016510282063730466, "age": 27.0, "ep": 8, "clade_membership": "3c2.A"}}], "yvalue": 143.25, "attr": {"num_date": 2015.887881294613, "num_date_confidence": [2015.706614279665, 2016.1356868739333], "region_confidence": {"japan_korea": 0.1870817217917216, "southeast_asia": 0.634210028716062, "west_asia": 0.03739340989496061, "north_america": 0.13502263716887244}, "region": "southeast_asia", "age_score": 1.4227413234801665, "region_entropy": 0.44810977345218883, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.03748822673867252, "div": 0.015921548523245115, "age": 26.0, "ep": 8, "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 3.99829, "clade": 233, "strain": "NODE_0000152", "muts": ["A1302C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0171, "tvalue": 4.35755, "clade": 234, "strain": "A/Bangladesh/5011/2015", "muts": ["T56C", "C85T", "A249G", "T432C", "T594C", "A1575G"], "aa_muts": {"SigPep": [], "HA1": ["I3T", "I67M"], "HA2": []}, "yvalue": 141.0, "attr": {"num_date_confidence": [2015.6570841889118, 2015.6570841889118], "region_confidence": {"south_asia": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Bangladesh/5011/2015", "num_date": 2015.6570841889118, "lbi": 0.06675436539381265, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI673853", "division": "bangladesh", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-08-29", "gender": "male", "region": "south_asia", "raw_date": "2015-08-29", "country": "bangladesh", "div": 0.01709504288076546, "age": 20, "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 4.0468, "clade": 235, "strain": "NODE_0000310", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01473, "tvalue": 4.27881, "clade": 236, "strain": "NODE_0000153", "muts": ["A472G", "T1503C"], "aa_muts": {"SigPep": [], "HA1": ["R142G"], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 4.69704, "clade": 237, "strain": "A/Ethiopia/1780/2015", "muts": ["T339C", "A567G", "T723C", "G1080A", "T1506C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 140.0, "attr": {"num_date_confidence": [2015.996577686516, 2015.996577686516], "region_confidence": {"africa": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Ethiopia/1780/2015", "num_date": 2015.996577686516, "lbi": 0.028567964004266134, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI730927", "division": "ethiopia", "avg_age": 30.660618279569896, "authors": "centers_for_disease_control_and_prevention", "date": "2015-12-31", "gender": "female", "region": "africa", "raw_date": "2015-12-31", "country": "ethiopia", "div": 0.017681462076522565, "age": 32, "clade_membership": "3c2.A"}}, {"xvalue": 0.01473, "tvalue": 4.30553, "clade": 238, "strain": "A/Oman/5287/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 139.0, "attr": {"num_date_confidence": [2015.6050650239563, 2015.6050650239563], "region_confidence": {"west_asia": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Oman/5287/2015", "num_date": 2015.6050650239563, "lbi": 0.07602540849295941, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI731239", "division": "oman", "avg_age": 30.660618279569896, "authors": "crick_worldwide_influenza_centre", "date": "2015-08-10", "gender": "female", "region": "west_asia", "raw_date": "2015-08-10", "country": "oman", "div": 0.014734302470761282, "age": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.0165, "tvalue": 5.37671, "clade": 239, "strain": "A/NordPasDeCalais/2751/2016", "muts": ["A233G", "G419A", "C675T"], "aa_muts": {"SigPep": [], "HA1": ["E62G", "S124N"], "HA2": []}, "yvalue": 138.0, "attr": {"num_date_confidence": [2016.6762491444217, 2016.6762491444217], "region_confidence": {"europe": 1.0}, "age_score": 1.4227413234801665, "strain": "A/NordPasDeCalais/2751/2016", "num_date": 2016.6762491444217, "lbi": 0.005223184668024071, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "undetermined", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI840939", "division": "nord_pasde_calais_picardie", "avg_age": 30.660618279569896, "authors": "institut_pasteur", "date": "2016-09-04", "gender": "male", "region": "europe", "raw_date": "2016-09-04", "country": "france", "div": 0.016501659854433203, "age": 27, "clade_membership": "3c2.A"}}], "yvalue": 139.0, "attr": {"num_date": 2015.5783511005004, "num_date_confidence": [2015.4711701292795, 2015.6050650239563], "region_confidence": {"west_asia": 0.9909008252548142}, "region": "west_asia", "age_score": 1.4227413234801665, "region_entropy": 0.022612053516497234, "ne": 5, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.0812761337241458, "div": 0.014734302417856972, "age": 21.333333333333332, "ep": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 4.11835, "clade": 240, "strain": "NODE_0000311", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01532, "tvalue": 4.47254, "clade": 241, "strain": "A/Malmo/5/2015", "muts": ["C741T", "A1026G", "C1637T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["A201V"]}, "yvalue": 137.0, "attr": {"num_date_confidence": [2015.7720739219712, 2015.7720739219712], "region_confidence": {"europe": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Malmo/5/2015", "num_date": 2015.7720739219712, "lbi": 0.05007617577979123, "ep": 5, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI669992", "division": "skane", "avg_age": 30.660618279569896, "authors": "swedish_institute_for_infectious_disease_control", "date": "2015-10-10", "gender": "female", "region": "europe", "raw_date": "2015-10-10", "country": "sweden", "div": 0.015324224337840845, "age": 54, "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 4.25166, "clade": 242, "strain": "NODE_0000312", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01415, "tvalue": 4.73879, "clade": 243, "strain": "A/Turkey/TR-32/2016", "muts": ["T483C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 136.0, "attr": {"num_date_confidence": [2016.03832991102, 2016.03832991102], "region_confidence": {"west_asia": 1.0}, "age_score": 1.4227413234801665, "strain": "A/Turkey/TR-32/2016", "num_date": 2016.03832991102, "lbi": 0.025736375725002925, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI715886", "division": "turkey", "avg_age": 30.660618279569896, "authors": "crick_worldwide_influenza_centre", "date": "2016-01-15", "gender": "male", "region": "west_asia", "raw_date": "2016-01-15", "country": "turkey", "div": 0.014145183349197302, "age": 22, "clade_membership": "3c2.A"}}, {"xvalue": 0.01473, "tvalue": 4.43147, "clade": 244, "strain": "A/SaudiArabia/78764/2015", "muts": ["G1344A", "C1476T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 135.0, "attr": {"num_date_confidence": [2015.7310061601643, 2015.7310061601643], "region_confidence": {"west_asia": 1.0}, "age_score": 1.4227413234801665, "strain": "A/SaudiArabia/78764/2015", "num_date": 2015.7310061601643, "lbi": 0.05549066265616453, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI678170", "division": "saudi_arabia", "avg_age": 30.660618279569896, "authors": "crick_worldwide_influenza_centre", "date": "2015-09-25", "gender": "?", "region": "west_asia", "raw_date": "2015-09-25", "country": "saudi_arabia", "div": 0.014734560637269372, "age": "unknown", "clade_membership": "3c2.A"}}], "yvalue": 135.5, "attr": {"num_date": 2015.5511930775892, "num_date_confidence": [2015.3952049211275, 2015.6651435682131], "region_confidence": {"west_asia": 0.9999977989322246}, "region": "west_asia", "age_score": 1.4227413234801665, "region_entropy": 1.3466335540266094e-05, "ne": 5, "glyc": 12, "num_gender": -0.5, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.08698602491636832, "div": 0.013556452756411845, "age": 22.0, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 136.25, "attr": {"num_date": 2015.4178921727741, "num_date_confidence": [2015.3097963394582, 2015.5600459418959], "region_confidence": {"west_asia": 0.9908006172657772}, "region": "west_asia", "age_score": 1.4227413234801665, "region_entropy": 0.0229389420629202, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.12138893562491875, "div": 0.013556452703507535, "age": 38.0, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 137.625, "attr": {"num_date": 2015.3463395332976, "num_date_confidence": [2015.235093968206, 2015.4606646203047], "region_confidence": {"west_asia": 0.9907675039546426}, "region": "west_asia", "age_score": 1.4227413234801665, "region_entropy": 0.023143089021578304, "ne": 5, "glyc": 12, "num_gender": 0.16666666666666666, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.14516649619915872, "div": 0.013556452650603226, "age": 28.0, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 139.3125, "attr": {"num_date": 2015.297827588588, "num_date_confidence": [2015.140780364902, 2015.3913551429907], "region_confidence": {"west_asia": 0.720149545839101, "north_america": 0.16355796724698007, "south_asia": 0.09814064438016415}, "region": "west_asia", "age_score": 1.4227413234801665, "region_entropy": 0.3707951818508322, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.16388438260817653, "div": 0.013556452597698916, "age": 26.666666666666668, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 141.28125, "attr": {"num_date": 2015.1521418237576, "num_date_confidence": [2015.0094165083908, 2015.2919784884555], "region_confidence": {"west_asia": 0.19947215378706892, "southeast_asia": 0.03668602560780645, "north_america": 0.7209344584372441, "south_asia": 0.027194146417597532}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 0.3714462644808792, "ne": 5, "glyc": 12, "num_gender": 0.3, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.23589236186377915, "div": 0.012967582364983006, "age": 26.444444444444443, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 144.32813, "attr": {"num_date": 2015.0932968005484, "num_date_confidence": [2014.9412561154286, 2015.184092099442], "region_confidence": {"north_america": 0.9929138000562987}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 0.02156638432703734, "ne": 5, "glyc": 12, "num_gender": 0.26666666666666666, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.273277610069838, "div": 0.012967582312078696, "age": 31.615384615384617, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 151.73828, "attr": {"num_date": 2014.9405553701595, "num_date_confidence": [2014.9063308476523, 2015.0969810167283], "region_confidence": {"north_america": 0.9911137337429404}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 0.022070932801496086, "ne": 5, "glyc": 12, "num_gender": 0.3181818181818182, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.400351031568066, "div": 0.012967582259174387, "age": 38.8421052631579, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 3.80111, "clade": 245, "strain": "NODE_0000104", "muts": ["C531T", "G1683A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 4.30553, "clade": 246, "strain": "A/Hangzhou/B647/2015", "muts": ["G21A", "T165A", "C420T", "G482A", "G1200A", "A1382G"], "aa_muts": {"SigPep": [], "HA1": ["S145N"], "HA2": ["N116S"]}, "yvalue": 134.0, "attr": {"num_date_confidence": [2015.6050650239563, 2015.6050650239563], "region_confidence": {"china": 1.0}, "age_score": 1.5757791914885841, "strain": "A/Hangzhou/B647/2015", "num_date": 2015.6050650239563, "lbi": 0.14626456138901833, "ep": 4, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": 0, "rb": 1, "isolate_id": "EPI670294", "division": "zhejiang", "avg_age": 29.26842948717949, "authors": "hangzhou_center_for_disease_control_and_prevention", "date": "2015-08-10", "gender": "?", "region": "china", "raw_date": "2015-08-10", "country": "china", "div": 0.016510312454721045, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01415, "tvalue": 4.0374, "clade": 247, "strain": "NODE_0000111", "muts": ["C966T", "G1089T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.53551, "clade": 248, "strain": "A/Brisbane/195/2015", "muts": ["C217A", "G473A", "A1050T"], "aa_muts": {"SigPep": [], "HA1": ["Q57K", "R142K"], "HA2": []}, "yvalue": 133.0, "attr": {"num_date_confidence": [2015.8350444900752, 2015.8350444900752], "region_confidence": {"oceania": 1.0}, "age_score": 1.5757791914885841, "strain": "A/Brisbane/195/2015", "num_date": 2015.8350444900752, "lbi": 0.08230800597607602, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI704172", "division": "queensland", "avg_age": 29.26842948717949, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2015-11-02", "gender": "female", "region": "oceania", "raw_date": "2015-11-02", "country": "australia", "div": 0.015916606646880983, "age": 17, "clade_membership": "3c2.A"}}, {"xvalue": 0.0177, "tvalue": 4.37124, "clade": 249, "strain": "A/Victoria/63/2015", "muts": ["T15C", "C17A", "A1260T", "A1688T", "T1691A", "T1692A"], "aa_muts": {"SigPep": ["A6D"], "HA1": [], "HA2": ["N218I", "I219K"]}, "yvalue": 132.0, "attr": {"num_date_confidence": [2015.6707734428473, 2015.6707734428473], "region_confidence": {"oceania": 1.0}, "age_score": 1.5757791914885841, "strain": "A/Victoria/63/2015", "num_date": 2015.6707734428473, "lbi": 0.12410723608118478, "ep": 5, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI750800", "division": "victoria", "avg_age": 29.26842948717949, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2015-09-03", "gender": "female", "region": "oceania", "raw_date": "2015-09-03", "country": "australia", "div": 0.017696125933637487, "age": 19, "clade_membership": "3c2.A"}}], "yvalue": 132.5, "attr": {"num_date": 2015.3369392929308, "num_date_confidence": [2015.1484565232352, 2015.4524646792715], "region_confidence": {"oceania": 0.9997436707183763}, "region": "oceania", "age_score": 1.5757791914885841, "region_entropy": 0.0010326313072017699, "ne": 5, "glyc": 12, "num_gender": 1.0, "avg_age": 29.26842948717949, "rb": 2, "lbi": 0.28592552470297367, "div": 0.014146567731635131, "age": 18.0, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 3.99636, "clade": 250, "strain": "NODE_0000313", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 4.05404, "clade": 251, "strain": "NODE_0000314", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.70746, "clade": 252, "strain": "NODE_0000103", "muts": ["A472G", "T912C", "G1087A", "G1197A", "A1536G"], "aa_muts": {"SigPep": [], "HA1": ["R142G"], "HA2": ["V18M"]}, "children": [{"xvalue": 0.01592, "tvalue": 4.92497, "clade": 253, "strain": "A/Hokkaido/20/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 131.0, "attr": {"num_date_confidence": [2016.2245037645448, 2016.2245037645448], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.42838936945684, "strain": "A/Hokkaido/20/2016", "num_date": 2016.2245037645448, "lbi": 0.040489501757741325, "ep": 6, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI809659", "division": "hokkaido", "avg_age": 23.72, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-03-23", "gender": "female", "region": "japan_korea", "raw_date": "2016-03-23", "country": "japan", "div": 0.015916566647955974, "age": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.01651, "tvalue": 4.75248, "clade": 254, "strain": "A/Singapore/INFGP-16-0159/2016", "muts": ["C873T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 130.0, "attr": {"num_date_confidence": [2016.0520191649555, 2016.0520191649555], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.42838936945684, "strain": "A/Singapore/INFGP-16-0159/2016", "num_date": 2016.0520191649555, "lbi": 0.06231824397569663, "ep": 6, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI780568", "division": "singapore", "avg_age": 23.72, "authors": "ministry_of_health,_singapore", "date": "2016-01-20", "gender": "female", "region": "southeast_asia", "raw_date": "2016-01-20", "country": "singapore", "div": 0.016505443909820037, "age": 14, "clade_membership": "3c2.A"}}], "yvalue": 130.5, "attr": {"num_date": 2016.006999123757, "num_date_confidence": [2015.84302647699, 2016.0455386615995], "region_confidence": {"japan_korea": 0.16218104828926902, "southeast_asia": 0.7837783931223954, "china": 0.05395036499989716}, "region": "southeast_asia", "age_score": 1.42838936945684, "region_entropy": 0.2799024306451306, "ne": 6, "glyc": 12, "num_gender": 1.0, "avg_age": 23.72, "rb": 2, "lbi": 0.06974211213397821, "div": 0.015916566595051664, "age": 10.0, "ep": 6, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.12222, "clade": 255, "strain": "NODE_0000315", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01533, "tvalue": 4.59574, "clade": 256, "strain": "A/Kazakhstan/53/2015", "muts": ["C321T", "A583G", "A939G", "C1101T"], "aa_muts": {"SigPep": [], "HA1": ["I179V"], "HA2": []}, "yvalue": 129.0, "attr": {"num_date_confidence": [2015.8952772073922, 2015.8952772073922], "region_confidence": {"west_asia": 1.0}, "age_score": 1.42838936945684, "strain": "A/Kazakhstan/53/2015", "num_date": 2015.8952772073922, "lbi": 0.0922137376220731, "ep": 6, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI695666", "division": "kazakhstan", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2015-11-24", "gender": "male", "region": "west_asia", "raw_date": "2015-11-24", "country": "kazakhstan", "div": 0.01532609632651919, "age": 26, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.26371, "clade": 257, "strain": "NODE_0000316", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01356, "tvalue": 4.37671, "clade": 258, "strain": "A/Taiwan/1063/2015", "muts": ["G84A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 128.0, "attr": {"num_date_confidence": [2015.6762491444217, 2015.6762491444217], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Taiwan/1063/2015", "num_date": 2015.6762491444217, "lbi": 0.15944184936408648, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI695690", "division": "taiwan", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2015-09-05", "gender": "male", "region": "china", "raw_date": "2015-09-05", "country": "taiwan", "div": 0.013556638594581281, "age": 12, "clade_membership": "3c2.A"}}, {"xvalue": 0.01297, "tvalue": 4.41979, "clade": 259, "strain": "NODE_0000317", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01297, "tvalue": 5.13852, "clade": 260, "strain": "A/Yunnan-Linxiang/1718/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 127.0, "attr": {"num_date_confidence": [2016.438056125941, 2016.438056125941], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Yunnan-Linxiang/1718/2016", "num_date": 2016.438056125941, "lbi": 0.023740010255201605, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI817115", "division": "yunnan", "avg_age": 23.72, "authors": "who_chinese_national_influenza_center", "date": "2016-06-09", "gender": "male", "region": "china", "raw_date": "2016-06-09", "country": "china", "div": 0.012967699878620138, "age": 45, "clade_membership": "3c2.A"}}, {"xvalue": 0.01415, "tvalue": 4.66145, "clade": 261, "strain": "A/Shaanxi-Beilin/12166/2015", "muts": ["A153G", "C1170T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 126.0, "attr": {"num_date_confidence": [2015.9609856262834, 2015.9609856262834], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Shaanxi-Beilin/12166/2015", "num_date": 2015.9609856262834, "lbi": 0.07824446329515201, "ep": 5, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI713610", "division": "shaanxi", "avg_age": 23.72, "authors": "who_chinese_national_influenza_center", "date": "2015-12-18", "gender": "female", "region": "china", "raw_date": "2015-12-18", "country": "china", "div": 0.014145984271885551, "age": 7, "clade_membership": "3c2.A"}}], "yvalue": 126.5, "attr": {"num_date": 2015.7193255839413, "num_date_confidence": [2015.5729700622, 2015.902097838511], "region_confidence": {"china": 0.9999999999873949}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 1.5485166823204646e-10, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 23.72, "rb": 2, "lbi": 0.14316362059981827, "div": 0.012967699825715828, "age": 26.0, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 127.25, "attr": {"num_date": 2015.5632458667496, "num_date_confidence": [2015.424781406288, 2015.6599301351953], "region_confidence": {"china": 0.9999999979251821}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 1.9596598050544244e-08, "ne": 5, "glyc": 12, "num_gender": -0.3333333333333333, "avg_age": 23.72, "rb": 2, "lbi": 0.21149206269217877, "div": 0.012967699772811519, "age": 21.333333333333332, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 128.125, "attr": {"num_date": 2015.4217596808694, "num_date_confidence": [2015.30682055185, 2015.5783987696855], "region_confidence": {"china": 0.999954314210375}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 0.00023298414615038573, "ne": 5, "glyc": 12, "num_gender": -0.5, "avg_age": 23.72, "rb": 2, "lbi": 0.3012386879843852, "div": 0.01296769971990721, "age": 22.5, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 129.3125, "attr": {"num_date": 2015.3535786059529, "num_date_confidence": [2015.1951572423293, 2015.4897906285792], "region_confidence": {"china": 0.999948260632319}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 0.0002550762785595181, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 23.72, "rb": 2, "lbi": 0.35722135124276805, "div": 0.0129676996670029, "age": 18.333333333333332, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 4.10464, "clade": 262, "strain": "NODE_0000112", "muts": ["T705C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.54646, "clade": 263, "strain": "A/Vietnam/172/2015", "muts": ["G74A", "G280A", "C411A", "A555C"], "aa_muts": {"SigPep": [], "HA1": ["S9N", "G78S", "N121K"], "HA2": []}, "yvalue": 125.0, "attr": {"num_date_confidence": [2015.8459958932237, 2015.8459958932237], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.42838936945684, "strain": "A/Vietnam/172/2015", "num_date": 2015.8459958932237, "lbi": 0.12546396116094607, "ep": 7, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI712511", "division": "vietnam", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2015-11-06", "gender": "male", "region": "southeast_asia", "raw_date": "2015-11-06", "country": "vietnam", "div": 0.01591560033953989, "age": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01356, "tvalue": 4.24214, "clade": 264, "strain": "NODE_0000318", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01474, "tvalue": 4.58748, "clade": 265, "strain": "NODE_0000113", "muts": ["T44C", "T606A"], "aa_muts": {"SigPep": ["F15S"], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01709, "tvalue": 5.01805, "clade": 266, "strain": "A/Fiji/31/2016", "muts": ["G219A", "C342T", "A1242G", "G1557A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 124.0, "attr": {"num_date_confidence": [2016.3175906913073, 2016.3175906913073], "region_confidence": {"oceania": 1.0}, "age_score": 1.42838936945684, "strain": "A/Fiji/31/2016", "num_date": 2016.3175906913073, "lbi": 0.050926527326527596, "ep": 5, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI831570", "division": "fiji", "avg_age": 23.72, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-04-26", "gender": "male", "region": "oceania", "raw_date": "2016-04-26", "country": "fiji", "div": 0.01709312040447888, "age": 25, "clade_membership": "3c2.A"}}, {"xvalue": 0.01768, "tvalue": 5.03448, "clade": 267, "strain": "A/Tsaralalana/2054/2016", "muts": ["T9C", "C12T", "T29C", "G1080A", "G1545A"], "aa_muts": {"SigPep": ["I10T"], "HA1": [], "HA2": []}, "yvalue": 123.0, "attr": {"num_date_confidence": [2016.3340177960301, 2016.3340177960301], "region_confidence": {"africa": 1.0}, "age_score": 1.42838936945684, "strain": "A/Tsaralalana/2054/2016", "num_date": 2016.3340177960301, "lbi": 0.04887745227836923, "ep": 5, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI824102", "division": "antananarivo", "avg_age": 23.72, "authors": "crick_worldwide_influenza_centre", "date": "2016-05-02", "gender": "male", "region": "africa", "raw_date": "2016-05-02", "country": "madagascar", "div": 0.017683533511810165, "age": "unknown", "clade_membership": "3c2.A"}}, {"xvalue": 0.01532, "tvalue": 4.92221, "clade": 268, "strain": "NODE_0000114", "muts": ["A1065C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01591, "tvalue": 5.04543, "clade": 269, "strain": "A/Dnipro/767/2016", "muts": ["A1536G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 122.0, "attr": {"num_date_confidence": [2016.3449691991786, 2016.3449691991786], "region_confidence": {"south_asia": 1.0}, "age_score": 1.42838936945684, "strain": "A/Dnipro/767/2016", "num_date": 2016.3449691991786, "lbi": 0.04755741336975943, "ep": 5, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI775593", "division": "bangladesh", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2016-05-06", "gender": "female", "region": "south_asia", "raw_date": "2016-05-06", "country": "bangladesh", "div": 0.01591272674163053, "age": 20, "clade_membership": "3c2.A"}}, {"xvalue": 0.01532, "tvalue": 4.94687, "clade": 270, "strain": "A/Dnipro/764/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 121.0, "attr": {"num_date_confidence": [2016.2464065708418, 2016.2464065708418], "region_confidence": {"south_asia": 1.0}, "age_score": 1.42838936945684, "strain": "A/Dnipro/764/2016", "num_date": 2016.2464065708418, "lbi": 0.06084588881335724, "ep": 5, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI773605", "division": "bangladesh", "avg_age": 23.72, "authors": "crick_worldwide_influenza_centre", "date": "2016-03-31", "gender": "male", "region": "south_asia", "raw_date": "2016-03-31", "country": "bangladesh", "div": 0.015324057822786927, "age": 5, "clade_membership": "3c2.A"}}], "yvalue": 121.5, "attr": {"num_date": 2016.2217493811002, "num_date_confidence": [2016.0263793956383, 2016.2464065708418], "region_confidence": {"south_asia": 0.9999976409702266}, "region": "south_asia", "age_score": 1.42838936945684, "region_entropy": 1.5427247980480205e-05, "ne": 6, "glyc": 12, "num_gender": 0.0, "avg_age": 23.72, "rb": 2, "lbi": 0.06471462562292359, "div": 0.015324057769882618, "age": 12.5, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 122.83333, "attr": {"num_date": 2015.887021885518, "num_date_confidence": [2015.70225842429, 2016.0330684779203], "region_confidence": {"china": 0.27718733238451754, "oceania": 0.2223515452489833, "africa": 0.2141752398014944, "south_asia": 0.2860558529615517}, "region": "south_asia", "age_score": 1.42838936945684, "region_entropy": 0.5994748949168301, "ne": 6, "glyc": 12, "num_gender": -0.5, "avg_age": 23.72, "rb": 2, "lbi": 0.14942669943670606, "div": 0.0147352520068109, "age": 16.666666666666668, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01651, "tvalue": 4.80759, "clade": 271, "strain": "NODE_0000117", "muts": ["C440A", "T441A", "C465T", "G473A", "A1485T"], "aa_muts": {"SigPep": [], "HA1": ["T131K", "R142K"], "HA2": []}, "children": [{"xvalue": 0.01887, "tvalue": 5.22887, "clade": 272, "strain": "A/Yunnan-Mengzi/1646/2016", "muts": ["G35A", "G1323A", "T1431C", "G1633T"], "aa_muts": {"SigPep": ["C12Y"], "HA1": [], "HA2": ["V200F"]}, "yvalue": 120.0, "attr": {"num_date_confidence": [2016.5284052019165, 2016.5284052019165], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Yunnan-Mengzi/1646/2016", "num_date": 2016.5284052019165, "lbi": 0.15834594984826023, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI829525", "division": "yunnan", "avg_age": 23.72, "authors": "who_chinese_national_influenza_center", "date": "2016-07-12", "gender": "female", "region": "china", "raw_date": "2016-07-12", "country": "china", "div": 0.018869253687380603, "age": 34, "clade_membership": "3c2.A"}}, {"xvalue": 0.01651, "tvalue": 4.92891, "clade": 273, "strain": "NODE_0000319", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01828, "tvalue": 6.22065, "clade": 274, "strain": "A/Sichuan-Gaoxin/1562/2017", "muts": ["A51G", "G1404A", "T1638C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 119.0, "attr": {"num_date_confidence": [2017.520191649555, 2017.520191649555], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Sichuan-Gaoxin/1562/2017", "num_date": 2017.520191649555, "lbi": 0.1127698053328575, "ep": 7, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1062709", "division": "sichuan", "avg_age": 23.72, "authors": "who_chinese_national_influenza_center", "date": "2017-07-10", "gender": "male", "region": "china", "raw_date": "2017-07-10", "country": "china", "div": 0.01827765530564968, "age": 38, "clade_membership": "3c2.A"}}, {"xvalue": 0.0171, "tvalue": 5.0926, "clade": 275, "strain": "NODE_0000119", "muts": ["G830A"], "aa_muts": {"SigPep": [], "HA1": ["R261Q"], "HA2": []}, "children": [{"xvalue": 0.01946, "tvalue": 5.70868, "clade": 276, "strain": "A/HongKong/122/2017", "muts": ["G126A", "C447T", "A472G", "T577C"], "aa_muts": {"SigPep": [], "HA1": ["K142E"], "HA2": []}, "yvalue": 118.0, "attr": {"num_date_confidence": [2017.0082135523614, 2017.0082135523614], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/HongKong/122/2017", "num_date": 2017.0082135523614, "lbi": 0.1288251163403483, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI918268", "division": "hong_kong", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2017-01-04", "gender": "female", "region": "china", "raw_date": "2017-01-04", "country": "hong_kong", "div": 0.019457381296635205, "age": 21, "clade_membership": "A2"}}, {"xvalue": 0.01828, "tvalue": 5.40579, "clade": 277, "strain": "NODE_0000128", "muts": ["C527A", "T629C"], "aa_muts": {"SigPep": [], "HA1": ["T160K", "L194P"], "HA2": []}, "children": [{"xvalue": 0.01946, "tvalue": 5.66692, "clade": 278, "strain": "A/Brisbane/321/2016", "muts": ["G120A", "A555T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 117.0, "attr": {"num_date_confidence": [2016.9664613278576, 2016.9664613278576], "region_confidence": {"oceania": 1.0}, "age_score": 1.42838936945684, "strain": "A/Brisbane/321/2016", "num_date": 2016.9664613278576, "lbi": 0.18261531768389552, "ep": 9, "region_entropy": -0.0, "ne": 4, "passage": "egg", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1048339", "division": "queensland", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2016-12-19", "gender": "male", "region": "oceania", "raw_date": "2016-12-19", "country": "australia", "div": 0.019456386244623175, "age": "unknown", "clade_membership": "A2"}}, {"xvalue": 0.02005, "tvalue": 5.76617, "clade": 279, "strain": "A/Washington/16/2017", "muts": ["G180A", "C522T", "C656T"], "aa_muts": {"SigPep": [], "HA1": ["T203I"], "HA2": []}, "yvalue": 116.0, "attr": {"num_date_confidence": [2017.065708418891, 2017.065708418891], "region_confidence": {"north_america": 1.0}, "age_score": 1.42838936945684, "strain": "A/Washington/16/2017", "num_date": 2017.065708418891, "lbi": 0.1775884773656341, "ep": 10, "region_entropy": -0.0, "ne": 4, "passage": "egg", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1038495", "division": "washington", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2017-01-25", "gender": "male", "region": "north_america", "raw_date": "2017-01-25", "country": "usa", "div": 0.02004586119967815, "age": 33, "clade_membership": "A2"}}], "yvalue": 116.5, "attr": {"num_date": 2016.7053226286275, "num_date_confidence": [2016.5116287170479, 2016.843000380753], "region_confidence": {"oceania": 0.39078850070950527, "china": 0.32582366509286026, "north_america": 0.28312787263358247}, "region": "oceania", "age_score": 1.42838936945684, "region_entropy": 0.4744569200402221, "ne": 4, "glyc": 11, "num_gender": -1.0, "avg_age": 23.72, "rb": 2, "lbi": 0.3508043284668595, "div": 0.018277153123471595, "age": 33.0, "ep": 9, "clade_membership": "A2"}}, {"xvalue": 0.02064, "tvalue": 5.87367, "clade": 280, "strain": "NODE_0000120", "muts": ["C316A", "T348C", "A1035G", "G1125A", "G1197A", "C1689T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02182, "tvalue": 6.20149, "clade": 281, "strain": "A/LaRioja/271/2017", "muts": ["C83G", "G84C"], "aa_muts": {"SigPep": [], "HA1": ["T12S"], "HA2": []}, "yvalue": 115.0, "attr": {"num_date_confidence": [2017.501026694045, 2017.501026694045], "region_confidence": {"europe": 1.0}, "age_score": 1.42838936945684, "strain": "A/LaRioja/271/2017", "num_date": 2017.501026694045, "lbi": 0.18172915634277, "ep": 8, "region_entropy": -0.0, "ne": 6, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1059725", "division": "la_rioja", "avg_age": 23.72, "authors": "instituto_nacional_enfermedades_infecciosas_c.g.malbran", "date": "2017-07-03", "gender": "male", "region": "europe", "raw_date": "2017-07-03", "country": "spain", "div": 0.021823615443568666, "age": 4, "clade_membership": "A2/re"}}, {"xvalue": 0.02064, "tvalue": 6.27541, "clade": 282, "strain": "A/Alaska/45/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 114.0, "attr": {"num_date_confidence": [2017.5749486652978, 2017.5749486652978], "region_confidence": {"north_america": 1.0}, "age_score": 1.42838936945684, "strain": "A/Alaska/45/2017", "num_date": 2017.5749486652978, "lbi": 0.16514999461578467, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1056244", "division": "alaska", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2017-07-30", "gender": "male", "region": "north_america", "raw_date": "2017-07-30", "country": "usa", "div": 0.020640375256471142, "age": 77, "clade_membership": "A2/re"}}, {"xvalue": 0.02241, "tvalue": 6.33564, "clade": 283, "strain": "A/Louisiana/48/2017", "muts": ["T9A", "A576G", "G1269A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 113.0, "attr": {"num_date_confidence": [2017.6351813826147, 2017.6351813826147], "region_confidence": {"north_america": 1.0}, "age_score": 1.42838936945684, "strain": "A/Louisiana/48/2017", "num_date": 2017.6351813826147, "lbi": 0.15437202905237565, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1059950", "division": "louisiana", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2017-08-21", "gender": "female", "region": "north_america", "raw_date": "2017-08-21", "country": "usa", "div": 0.022410075815317357, "age": 31, "clade_membership": "A2/re"}}], "yvalue": 114.0, "attr": {"num_date": 2017.1732119280168, "num_date_confidence": [2017.0046158549806, 2017.362388659097], "region_confidence": {"north_america": 0.9997073574017136}, "region": "north_america", "age_score": 1.42838936945684, "region_entropy": 0.0012390498595706214, "ne": 5, "clade_annotation": "A2/re", "glyc": 12, "num_gender": -0.3333333333333333, "avg_age": 23.72, "rb": 2, "lbi": 0.3417446218968131, "div": 0.020640375203566833, "age": 37.333333333333336, "ep": 8, "clade_membership": "A2/re"}}, {"xvalue": 0.01769, "tvalue": 5.1863, "clade": 284, "strain": "NODE_0000129", "muts": ["C522T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01946, "tvalue": 5.5711, "clade": 285, "strain": "A/Shaanxi-Changan/1569/2016", "muts": ["T339C", "T426G", "G682A"], "aa_muts": {"SigPep": [], "HA1": ["N126K", "A212T"], "HA2": []}, "yvalue": 112.0, "attr": {"num_date_confidence": [2016.870636550308, 2016.870636550308], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Shaanxi-Changan/1569/2016", "num_date": 2016.870636550308, "lbi": 0.19653735327024924, "ep": 10, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI885579", "division": "shaanxi", "avg_age": 23.72, "authors": "who_chinese_national_influenza_center", "date": "2016-11-14", "gender": "female", "region": "china", "raw_date": "2016-11-14", "country": "china", "div": 0.019456741853361013, "age": 1, "clade_membership": "A2"}}, {"xvalue": 0.01887, "tvalue": 5.22613, "clade": 286, "strain": "A/Kawasaki/109/2016", "muts": ["G1218A", "C1272T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 111.0, "attr": {"num_date_confidence": [2016.5256673511294, 2016.5256673511294], "region_confidence": {"japan_korea": 1.0}, "age_score": 1.42838936945684, "strain": "A/Kawasaki/109/2016", "num_date": 2016.5256673511294, "lbi": 0.46557607238404297, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI854236", "division": "kanagawa", "avg_age": 23.72, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-07-11", "gender": "male", "region": "japan_korea", "raw_date": "2016-07-11", "country": "japan", "div": 0.018866372762709818, "age": 86, "clade_membership": "A2"}}, {"xvalue": 0.01769, "tvalue": 5.21381, "clade": 287, "strain": "NODE_0000320", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01887, "tvalue": 5.51634, "clade": 288, "strain": "A/Tianjin-Nankai/1973/2016", "muts": ["A521C", "G604A"], "aa_muts": {"SigPep": [], "HA1": ["N158T", "G186S"], "HA2": []}, "yvalue": 110.0, "attr": {"num_date_confidence": [2016.8158795345653, 2016.8158795345653], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Tianjin-Nankai/1973/2016", "num_date": 2016.8158795345653, "lbi": 0.23110308880760155, "ep": 10, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 3, "isolate_id": "EPI885840", "division": "tianjin", "avg_age": 23.72, "authors": "who_chinese_national_influenza_center", "date": "2016-10-25", "gender": "male", "region": "china", "raw_date": "2016-10-25", "country": "china", "div": 0.0188664525805443, "age": 3, "clade_membership": "A2"}}, {"xvalue": 0.02064, "tvalue": 6.22613, "clade": 289, "strain": "A/Mahasarakham/123/2017", "muts": ["T187A", "T549C", "A678G", "C704T", "A1494G"], "aa_muts": {"SigPep": [], "HA1": ["S47T", "S219F"], "HA2": []}, "yvalue": 109.0, "attr": {"num_date_confidence": [2017.5256673511294, 2017.5256673511294], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.42838936945684, "strain": "A/Mahasarakham/123/2017", "num_date": 2017.5256673511294, "lbi": 0.12351186366435941, "ep": 10, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1058397", "division": "maha_sarakham", "avg_age": 23.72, "authors": "centers_for_disease_control_and_prevention", "date": "2017-07-12", "gender": "female", "region": "southeast_asia", "raw_date": "2017-07-12", "country": "thailand", "div": 0.020638930172354422, "age": 22, "clade_membership": "A2"}}], "yvalue": 109.5, "attr": {"num_date": 2016.5133516794772, "num_date_confidence": [2016.4361576909034, 2016.7089030401175], "region_confidence": {"china": 0.9999969647450185}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 1.8183519485759495e-05, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 23.72, "rb": 2, "lbi": 0.4923468858433823, "div": 0.01768753614231525, "age": 12.5, "ep": 8, "clade_membership": "A2"}}], "yvalue": 110.83333, "attr": {"num_date": 2016.4858415371393, "num_date_confidence": [2016.3849465485687, 2016.512572509744], "region_confidence": {"china": 0.9999999580013857}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 3.3077868642767366e-07, "ne": 5, "glyc": 12, "num_gender": 0.0, "avg_age": 23.72, "rb": 2, "lbi": 0.5143171194615583, "div": 0.01768753608941094, "age": 28.0, "ep": 8, "clade_membership": "A2"}}, {"xvalue": 0.0171, "tvalue": 5.21901, "clade": 290, "strain": "NODE_0000321", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01769, "tvalue": 5.44516, "clade": 291, "strain": "A/Guangxi-Jinchengjiang/1996/2016", "muts": ["A939G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 108.0, "attr": {"num_date_confidence": [2016.7446954140999, 2016.7446954140999], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Guangxi-Jinchengjiang/1996/2016", "num_date": 2016.7446954140999, "lbi": 0.2941825619435644, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI885561", "division": "guangxi", "avg_age": 23.72, "authors": "who_chinese_national_influenza_center", "date": "2016-09-29", "gender": "male", "region": "china", "raw_date": "2016-09-29", "country": "china", "div": 0.017687468892829364, "age": 8, "clade_membership": "A2"}}, {"xvalue": 0.0171, "tvalue": 5.40354, "clade": 292, "strain": "NODE_0000322", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01887, "tvalue": 5.84557, "clade": 293, "strain": "A/Singapore/GP0269/2017", "muts": ["A555T", "T585C", "C1170T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 107.0, "attr": {"num_date_confidence": [2017.145106091718, 2017.145106091718], "region_confidence": {"southeast_asia": 1.0}, "age_score": 1.42838936945684, "strain": "A/Singapore/GP0269/2017", "num_date": 2017.145106091718, "lbi": 0.1943476812956697, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1023514", "division": "singapore", "avg_age": 23.72, "authors": "ministry_of_health,_singapore", "date": "2017-02-23", "gender": "male", "region": "southeast_asia", "raw_date": "2017-02-23", "country": "singapore", "div": 0.018868018269400058, "age": 46, "clade_membership": "A2"}}, {"xvalue": 0.0171, "tvalue": 5.52486, "clade": 294, "strain": "NODE_0000323", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01828, "tvalue": 5.99341, "clade": 295, "strain": "A/Guangdong-Zhenjiang/1326/2017", "muts": ["G320A", "T626C"], "aa_muts": {"SigPep": [], "HA1": ["S91N", "F193S"], "HA2": []}, "yvalue": 106.0, "attr": {"num_date_confidence": [2017.2929500342232, 2017.2929500342232], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Guangdong-Zhenjiang/1326/2017", "num_date": 2017.2929500342232, "lbi": 0.17095470578262165, "ep": 10, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 3, "isolate_id": "EPI1029916", "division": "guangdong", "avg_age": 23.72, "authors": "who_chinese_national_influenza_center", "date": "2017-04-18", "gender": "male", "region": "china", "raw_date": "2017-04-18", "country": "china", "div": 0.01827699729958485, "age": 8, "clade_membership": "A2"}}, {"xvalue": 0.01828, "tvalue": 5.87842, "clade": 296, "strain": "A/Anhui-Xuanzhou/1179/2017", "muts": ["A714G", "C1195A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 105.0, "attr": {"num_date_confidence": [2017.1779603011637, 2017.1779603011637], "region_confidence": {"china": 1.0}, "age_score": 1.42838936945684, "strain": "A/Anhui-Xuanzhou/1179/2017", "num_date": 2017.1779603011637, "lbi": 0.19898587074043786, "ep": 8, "region_entropy": -0.0, "ne": 5, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1030195", "division": "anhui", "avg_age": 23.72, "authors": "who_chinese_national_influenza_center", "date": "2017-03-07", "gender": "male", "region": "china", "raw_date": "2017-03-07", "country": "china", "div": 0.018277158941499613, "age": 16, "clade_membership": "A2"}}], "yvalue": 105.5, "attr": {"num_date": 2016.8244019322963, "num_date_confidence": [2016.6763581272576, 2017.0458060239312], "region_confidence": {"china": 0.9999999908167597}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 7.788377183615702e-08, "ne": 5, "glyc": 12, "num_gender": -1.0, "avg_age": 23.72, "rb": 2, "lbi": 0.39864462787751154, "div": 0.017098442105585344, "age": 12.0, "ep": 8, "clade_membership": "A2"}}], "yvalue": 106.25, "attr": {"num_date": 2016.703077929097, "num_date_confidence": [2016.5176956250527, 2016.8809506505957], "region_confidence": {"china": 0.9999815455295928}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 9.547649586544821e-05, "ne": 5, "glyc": 12, "num_gender": -1.0, "avg_age": 23.72, "rb": 2, "lbi": 0.45238212727613136, "div": 0.017098442052681035, "age": 23.333333333333332, "ep": 8, "clade_membership": "A2"}}], "yvalue": 107.125, "attr": {"num_date": 2016.518548034527, "num_date_confidence": [2016.4167071477432, 2016.7082430665823], "region_confidence": {"china": 0.9999999989569109}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 9.836614063178048e-09, "ne": 5, "glyc": 12, "num_gender": -1.0, "avg_age": 23.72, "rb": 2, "lbi": 0.5177896002105351, "div": 0.017098441999776726, "age": 19.5, "ep": 8, "clade_membership": "A2"}}], "yvalue": 113.29167, "attr": {"num_date": 2016.3921401409364, "num_date_confidence": [2016.2561782472594, 2016.491733911969], "region_confidence": {"china": 0.9999999998165993}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 1.865631624846779e-09, "ne": 5, "clade_annotation": "A2", "glyc": 12, "num_gender": -0.42857142857142855, "avg_age": 23.72, "rb": 2, "lbi": 0.6010266797812911, "div": 0.017098441946872416, "age": 27.384615384615383, "ep": 8, "clade_membership": "A2"}}], "yvalue": 116.14583, "attr": {"num_date": 2016.2284517981159, "num_date_confidence": [2016.0424278181347, 2016.3947944971244], "region_confidence": {"china": 0.9999999999845335}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 1.8833296148472084e-10, "ne": 5, "glyc": 12, "num_gender": -0.4666666666666667, "avg_age": 23.72, "rb": 2, "lbi": 0.5294141718320984, "div": 0.016509414794909607, "age": 28.142857142857142, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 118.07292, "attr": {"num_date": 2016.107123750056, "num_date_confidence": [2015.8987605863927, 2016.2742646814997], "region_confidence": {"china": 0.9999999932884134}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 6.174468621363338e-08, "ne": 5, "glyc": 12, "num_gender": -0.375, "avg_age": 23.72, "rb": 2, "lbi": 0.4539494394981582, "div": 0.016509414742005298, "age": 28.533333333333335, "ep": 7, "clade_membership": "3c2.A"}}], "yvalue": 120.45313, "attr": {"num_date": 2015.5416763018723, "num_date_confidence": [2015.3274673477927, 2015.7079056528848], "region_confidence": {"china": 0.9997967284826165}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 0.0009578741731619012, "ne": 5, "glyc": 12, "num_gender": -0.4, "avg_age": 23.72, "rb": 2, "lbi": 0.3543091818260057, "div": 0.013556577152170774, "age": 26.555555555555557, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 122.72656, "attr": {"num_date": 2015.404178812293, "num_date_confidence": [2015.260414303062, 2015.5822603527422], "region_confidence": {"china": 0.9998376267939695}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 0.0007505162798006878, "ne": 5, "glyc": 12, "num_gender": -0.42857142857142855, "avg_age": 23.72, "rb": 2, "lbi": 0.3786306749680878, "div": 0.013556577099266465, "age": 25.42105263157895, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 126.01953, "attr": {"num_date": 2015.2958932502384, "num_date_confidence": [2015.0821777840633, 2015.385081795694], "region_confidence": {"china": 0.9999615169117004}, "region": "china", "age_score": 1.42838936945684, "region_entropy": 0.00018676158890704642, "ne": 5, "glyc": 12, "num_gender": -0.3333333333333333, "avg_age": 23.72, "rb": 2, "lbi": 0.41263730476197524, "div": 0.01296769961409859, "age": 23.72, "ep": 5, "clade_membership": "3c2.A"}}, {"xvalue": 0.01592, "tvalue": 4.33137, "clade": 297, "strain": "NODE_0000101", "muts": ["A234G", "T561G", "A1264G", "G1269A", "G1499A"], "aa_muts": {"SigPep": [], "HA1": ["N171K"], "HA2": ["I77V", "G155E"]}, "children": [{"xvalue": 0.01946, "tvalue": 5.06733, "clade": 298, "strain": "A/HongKong/1705/2016", "muts": ["C336T", "G482A", "T783A", "G1056A", "C1215T", "C1479T"], "aa_muts": {"SigPep": [], "HA1": ["S145N"], "HA2": []}, "yvalue": 104.0, "attr": {"num_date_confidence": [2016.3668720054757, 2016.3668720054757], "region_confidence": {"china": 1.0}, "age_score": 0.5759270438954873, "strain": "A/HongKong/1705/2016", "num_date": 2016.3668720054757, "lbi": 0.1452687358438028, "ep": 5, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 1, "isolate_id": "EPI814001", "division": "hong_kong", "avg_age": 31.362554112554115, "authors": "centers_for_disease_control_and_prevention", "date": "2016-05-14", "gender": "male", "region": "china", "raw_date": "2016-05-14", "country": "hong_kong", "div": 0.019460018824640567, "age": 74, "clade_membership": "A1"}}, {"xvalue": 0.01769, "tvalue": 4.58205, "clade": 299, "strain": "A/Yokohama/102/2015", "muts": ["A289G", "T723C", "A1314G"], "aa_muts": {"SigPep": [], "HA1": ["N81D"], "HA2": []}, "yvalue": 103.0, "attr": {"num_date_confidence": [2015.8815879534566, 2015.8815879534566], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Yokohama/102/2015", "num_date": 2015.8815879534566, "lbi": 0.48872282453534316, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI687103", "division": "kanagawa", "avg_age": 31.362554112554115, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-11-19", "gender": "female", "region": "japan_korea", "raw_date": "2015-11-19", "country": "japan", "div": 0.017685043905896057, "age": 15, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 4.38766, "clade": 300, "strain": "A/Alaska/232/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 102.0, "attr": {"num_date_confidence": [2015.6872005475702, 2015.6872005475702], "region_confidence": {"north_america": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Alaska/232/2015", "num_date": 2015.6872005475702, "lbi": 0.7945405495491699, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI772786", "division": "alaska", "avg_age": 31.362554112554115, "authors": "centers_for_disease_control_and_prevention", "date": "2015-09-09", "gender": "male", "region": "north_america", "raw_date": "2015-09-09", "country": "usa", "div": 0.015917544503051544, "age": 63, "clade_membership": "A1"}}, {"xvalue": 0.01769, "tvalue": 4.81271, "clade": 301, "strain": "A/Tasmania/3/2016", "muts": ["G382A", "G1609A", "T1698A"], "aa_muts": {"SigPep": [], "HA1": ["V112I"], "HA2": ["A192T"]}, "yvalue": 101.0, "attr": {"num_date_confidence": [2016.1122518822724, 2016.1122518822724], "region_confidence": {"oceania": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Tasmania/3/2016", "num_date": 2016.1122518822724, "lbi": 0.2745506292735907, "ep": 6, "region_entropy": -0.0, "ne": 9, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI813324", "division": "tasmania", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-02-11", "gender": "male", "region": "oceania", "raw_date": "2016-02-11", "country": "australia", "div": 0.017686414220427833, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 4.45817, "clade": 302, "strain": "NODE_0000100", "muts": ["C597T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 4.98246, "clade": 303, "strain": "A/Jiangxi-Yuehu/1299/2016", "muts": ["A435G", "C710T"], "aa_muts": {"SigPep": [], "HA1": ["P221L"], "HA2": []}, "yvalue": 100.0, "attr": {"num_date_confidence": [2016.2819986310747, 2016.2819986310747], "region_confidence": {"china": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Jiangxi-Yuehu/1299/2016", "num_date": 2016.2819986310747, "lbi": 0.1796065838735337, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI777692", "division": "jiangxi", "avg_age": 31.362554112554115, "authors": "who_chinese_national_influenza_center", "date": "2016-04-13", "gender": "male", "region": "china", "raw_date": "2016-04-13", "country": "china", "div": 0.01768461814182246, "age": 7, "clade_membership": "A1"}}, {"xvalue": 0.01887, "tvalue": 4.79903, "clade": 304, "strain": "A/Taiwan/455/2016", "muts": ["A231C", "T1613C", "G1671A", "G1700A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["I193T"]}, "yvalue": 99.0, "attr": {"num_date_confidence": [2016.0985626283368, 2016.0985626283368], "region_confidence": {"china": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Taiwan/455/2016", "num_date": 2016.0985626283368, "lbi": 0.284109242411772, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI827113", "division": "taiwan", "avg_age": 31.362554112554115, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-02-06", "gender": "female", "region": "china", "raw_date": "2016-02-06", "country": "taiwan", "div": 0.0188650204495723, "age": 2, "clade_membership": "A1"}}], "yvalue": 99.5, "attr": {"num_date": 2015.7577053973534, "num_date_confidence": [2015.6393884183249, 2015.9337690012167], "region_confidence": {"china": 0.9999999996836644}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 3.175786790504434e-09, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.6661413585128413, "div": 0.01650639234082168, "age": 4.5, "ep": 6, "clade_membership": "A1"}}, {"xvalue": 0.0171, "tvalue": 4.59257, "clade": 305, "strain": "NODE_0000027", "muts": ["T187A", "G280A"], "aa_muts": {"SigPep": [], "HA1": ["S47T", "G78S"], "HA2": []}, "children": [{"xvalue": 0.02361, "tvalue": 5.71689, "clade": 306, "strain": "A/Yokohama/1/2017", "muts": ["G354A", "A399G", "G473A", "G765T", "C915A", "C930T", "A985T", "C1009A", "C1295T", "T1305C", "T1563C"], "aa_muts": {"SigPep": [], "HA1": ["R142K", "T313S"], "HA2": ["T87I"]}, "yvalue": 98.0, "attr": {"num_date_confidence": [2017.0164271047229, 2017.0164271047229], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Yokohama/1/2017", "num_date": 2017.0164271047229, "lbi": 0.03427086625209403, "ep": 9, "region_entropy": -0.0, "ne": 9, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI972326", "division": "kanagawa", "avg_age": 31.362554112554115, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2017-01-07", "gender": "male", "region": "japan_korea", "raw_date": "2017-01-07", "country": "japan", "div": 0.023607737008636054, "age": 8, "clade_membership": "A1"}}, {"xvalue": 0.01769, "tvalue": 5.02433, "clade": 307, "strain": "NODE_0000028", "muts": ["G1230A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01827, "tvalue": 5.14126, "clade": 308, "strain": "A/Brazil/6359/2016", "muts": ["A1541C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["N169T"]}, "yvalue": 97.0, "attr": {"num_date_confidence": [2016.4407939767282, 2016.4407939767282], "region_confidence": {"south_america": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Brazil/6359/2016", "num_date": 2016.4407939767282, "lbi": 0.237818204715195, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI824886", "division": "brazil", "avg_age": 31.362554112554115, "authors": "centers_for_disease_control_and_prevention", "date": "2016-06-10", "gender": "male", "region": "south_america", "raw_date": "2016-06-10", "country": "brazil", "div": 0.018274105044110797, "age": 44, "clade_membership": "A1"}}, {"xvalue": 0.02063, "tvalue": 6.07007, "clade": 309, "strain": "A/Colombia/960/2017", "muts": ["C618T", "A900G", "A1005G", "T1506C", "G1524A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 96.0, "attr": {"num_date_confidence": [2017.3696098562627, 2017.3696098562627], "region_confidence": {"south_america": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Colombia/960/2017", "num_date": 2017.3696098562627, "lbi": 0.10881995762658195, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1017192", "division": "colombia", "avg_age": 31.362554112554115, "authors": "centers_for_disease_control_and_prevention", "date": "2017-05-16", "gender": "male", "region": "south_america", "raw_date": "2017-05-16", "country": "colombia", "div": 0.02063393805587342, "age": 40, "clade_membership": "A1"}}], "yvalue": 96.5, "attr": {"num_date": 2016.3238642991666, "num_date_confidence": [2016.047305778002, 2016.4222199970066], "region_confidence": {"south_america": 0.9999307301431722}, "region": "south_america", "age_score": 0.5759270438954873, "region_entropy": 0.00033320311524431617, "ne": 7, "glyc": 12, "num_gender": -1.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.31856633610868595, "div": 0.017685140886173633, "age": 42.0, "ep": 8, "clade_membership": "A1"}}], "yvalue": 97.25, "attr": {"num_date": 2015.8921035769024, "num_date_confidence": [2015.7318010859076, 2016.1464721079933], "region_confidence": {"japan_korea": 0.12627662530936382, "south_america": 0.32912585675056133, "china": 0.544235396441292}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 0.41767687250557545, "ne": 7, "glyc": 12, "num_gender": -1.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.5696968814156986, "div": 0.017096284114828476, "age": 30.666666666666668, "ep": 8, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 4.42229, "clade": 310, "strain": "NODE_0000359", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 4.60287, "clade": 311, "strain": "NODE_0000009", "muts": ["T156C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01827, "tvalue": 4.95782, "clade": 312, "strain": "A/Nagano-C/47/2016", "muts": ["A417G", "C527A", "G1197A"], "aa_muts": {"SigPep": [], "HA1": ["T160K"], "HA2": []}, "yvalue": 95.0, "attr": {"num_date_confidence": [2016.2573579739903, 2016.2573579739903], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Nagano-C/47/2016", "num_date": 2016.2573579739903, "lbi": 0.2744810100495903, "ep": 6, "region_entropy": -0.0, "ne": 6, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI774064", "division": "nagano", "avg_age": 31.362554112554115, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-04-04", "gender": "male", "region": "japan_korea", "raw_date": "2016-04-04", "country": "japan", "div": 0.018274206319723537, "age": 24, "clade_membership": "A1"}}, {"xvalue": 0.01827, "tvalue": 5.3329, "clade": 313, "strain": "NODE_0000011", "muts": ["G171A", "T259C", "A472G"], "aa_muts": {"SigPep": [], "HA1": ["R142G"], "HA2": []}, "children": [{"xvalue": 0.02004, "tvalue": 5.82367, "clade": 314, "strain": "A/Paraiba/145960-IEC/2017", "muts": ["A293G", "G1073T", "A1536G"], "aa_muts": {"SigPep": [], "HA1": ["K82R"], "HA2": ["G13V"]}, "yvalue": 94.0, "attr": {"num_date_confidence": [2017.123203285421, 2017.123203285421], "region_confidence": {"south_america": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Paraiba/145960-IEC/2017", "num_date": 2017.123203285421, "lbi": 0.14671918751194366, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "undetermined", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1045870", "division": "paraiba", "avg_age": 31.362554112554115, "authors": "evandro_chagas_institute", "date": "2017-02-15", "gender": "female", "region": "south_america", "raw_date": "2017-02-15", "country": "brazil", "div": 0.020041747245150655, "age": 89, "clade_membership": "A1"}}, {"xvalue": 0.02241, "tvalue": 6.16316, "clade": 315, "strain": "A/Paris/1232/2017", "muts": ["C12T", "G234A", "T285A", "G682T", "A910C", "T1074C", "C1295T"], "aa_muts": {"SigPep": [], "HA1": ["F79L", "A212S", "I288L"], "HA2": ["T87I"]}, "yvalue": 93.0, "attr": {"num_date_confidence": [2017.4626967830254, 2017.4626967830254], "region_confidence": {"europe": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Paris/1232/2017", "num_date": 2017.4626967830254, "lbi": 0.11763470775916995, "ep": 8, "region_entropy": -0.0, "ne": 10, "passage": "undetermined", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1040259", "division": "ile_de_france", "avg_age": 31.362554112554115, "authors": "institut_pasteur", "date": "2017-06-19", "gender": "female", "region": "europe", "raw_date": "2017-06-19", "country": "france", "div": 0.022408954173467117, "age": 95, "clade_membership": "A1"}}], "yvalue": 93.5, "attr": {"num_date": 2016.632440212701, "num_date_confidence": [2016.3073600394534, 2016.8668370833745], "region_confidence": {"europe": 0.013151375004512723, "south_america": 0.973841942383953}, "region": "south_america", "age_score": 0.5759270438954873, "region_entropy": 0.06600887255062177, "ne": 7, "glyc": 12, "num_gender": 1.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.3308109754311368, "div": 0.018273786690968137, "age": 92.0, "ep": 7, "clade_membership": "A1"}}, {"xvalue": 0.01886, "tvalue": 5.13541, "clade": 316, "strain": "NODE_0000012", "muts": ["A10G", "C366T", "T640C", "A939C"], "aa_muts": {"SigPep": ["I4V"], "HA1": ["S198P"], "HA2": []}, "children": [{"xvalue": 0.02359, "tvalue": 6.23434, "clade": 317, "strain": "A/Rengo/55681/2017", "muts": ["A472G", "C554T", "A735G", "G945A", "T1104C", "T1158C", "C1320T", "T1422C"], "aa_muts": {"SigPep": [], "HA1": ["R142G", "P169L"], "HA2": []}, "yvalue": 92.0, "attr": {"num_date_confidence": [2017.5338809034909, 2017.5338809034909], "region_confidence": {"south_america": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Rengo/55681/2017", "num_date": 2017.5338809034909, "lbi": 0.10748238479147842, "ep": 8, "region_entropy": -0.0, "ne": 9, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1049279", "division": "o_higgins", "avg_age": 31.362554112554115, "authors": "centers_for_disease_control_and_prevention", "date": "2017-07-15", "gender": "female", "region": "south_america", "raw_date": "2017-07-15", "country": "chile", "div": 0.023585548878045877, "age": 21, "clade_membership": "A1"}}, {"xvalue": 0.01945, "tvalue": 5.23116, "clade": 318, "strain": "NODE_0000013", "muts": ["A318G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02004, "tvalue": 5.44724, "clade": 319, "strain": "A/Victoria/657/2016", "muts": ["T1433C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["M133T"]}, "yvalue": 91.0, "attr": {"num_date_confidence": [2016.0, 2016.9993155373031], "region_confidence": {"oceania": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Victoria/657/2016", "num_date": 2016.7467767643363, "lbi": 0.14520870742238098, "ep": 7, "region_entropy": -0.0, "ne": 9, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI892897", "division": "victoria", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-01-01", "gender": "?", "region": "oceania", "raw_date": "2016-XX-XX", "country": "australia", "div": 0.020041368870392515, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.02063, "tvalue": 5.48861, "clade": 320, "strain": "NODE_0000014", "muts": ["G830A", "C884T"], "aa_muts": {"SigPep": [], "HA1": ["R261Q", "S279F"], "HA2": []}, "children": [{"xvalue": 0.02122, "tvalue": 5.58753, "clade": 321, "strain": "A/SouthAustralia/157/2016", "muts": ["T363C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 90.0, "attr": {"num_date_confidence": [2016.8870636550307, 2016.8870636550307], "region_confidence": {"oceania": 1.0}, "age_score": 0.5759270438954873, "strain": "A/SouthAustralia/157/2016", "num_date": 2016.8870636550307, "lbi": 0.1022534814066852, "ep": 9, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI919381", "division": "south_australia", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-11-20", "gender": "male", "region": "oceania", "raw_date": "2016-11-20", "country": "australia", "div": 0.02121926616347821, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.02122, "tvalue": 5.64776, "clade": 322, "strain": "A/Cambodia/Fss31694/2016", "muts": ["A1386G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 89.0, "attr": {"num_date_confidence": [2016.9472963723476, 2016.9472963723476], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Cambodia/Fss31694/2016", "num_date": 2016.9472963723476, "lbi": 0.0879591981032593, "ep": 9, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI919321", "division": "cambodia", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-12-12", "gender": "?", "region": "southeast_asia", "raw_date": "2016-12-12", "country": "cambodia", "div": 0.02121926871286442, "age": "unknown", "clade_membership": "A1"}}], "yvalue": 89.5, "attr": {"num_date": 2016.7881473839984, "num_date_confidence": [2016.6640239525302, 2016.8726055144793], "region_confidence": {"oceania": 0.9996886607634019}, "region": "oceania", "age_score": 0.5759270438954873, "region_entropy": 0.001304830352010173, "ne": 8, "glyc": 12, "num_gender": -0.5, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.13094082713726587, "div": 0.020630576436960753, "age": "unknown", "ep": 9, "clade_membership": "A1"}}], "yvalue": 90.25, "attr": {"num_date": 2016.530698049088, "num_date_confidence": [2016.3461232058646, 2016.737308749859], "region_confidence": {"oceania": 0.9995437897070109}, "region": "oceania", "age_score": 0.5759270438954873, "region_entropy": 0.0017970835095565216, "ne": 8, "glyc": 12, "num_gender": -0.3333333333333333, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.24922817870534386, "div": 0.019452808152709094, "age": "unknown", "ep": 7, "clade_membership": "A1"}}], "yvalue": 91.125, "attr": {"num_date": 2016.4349422638563, "num_date_confidence": [2016.13807607346, 2016.6014419321402], "region_confidence": {"south_america": 0.9552124239176331, "oceania": 0.03928101987871732}, "region": "south_america", "age_score": 0.5759270438954873, "region_entropy": 0.08857812465396339, "ne": 8, "glyc": 12, "num_gender": 0.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.3166377323629416, "div": 0.0188641860655677, "age": 21.0, "ep": 7, "clade_membership": "A1"}}], "yvalue": 93.20833, "attr": {"num_date": 2015.9024032193079, "num_date_confidence": [2015.7905362463612, 2016.1016042454476], "region_confidence": {"japan_korea": 0.012523184662538524, "south_america": 0.9546731039354394, "china": 0.024620800503864344}, "region": "south_america", "age_score": 0.5759270438954873, "region_entropy": 0.10152377237254406, "ne": 7, "glyc": 12, "num_gender": 0.14285714285714285, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.6666525296442345, "div": 0.01650632225618864, "age": 57.25, "ep": 6, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 4.56734, "clade": 323, "strain": "NODE_0000324", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.71689, "clade": 324, "strain": "NODE_0000325", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 5.01532, "clade": 325, "strain": "A/Singapore/INFKK-16-0498/2016", "muts": ["A1030G"], "aa_muts": {"SigPep": [], "HA1": ["T328A"], "HA2": []}, "yvalue": 88.0, "attr": {"num_date_confidence": [2016.3148528405202, 2016.3148528405202], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Singapore/INFKK-16-0498/2016", "num_date": 2016.3148528405202, "lbi": 0.2109094472246392, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI780816", "division": "singapore", "avg_age": 31.362554112554115, "authors": "ministry_of_health,_singapore", "date": "2016-04-25", "gender": "female", "region": "southeast_asia", "raw_date": "2016-04-25", "country": "singapore", "div": 0.01650632495277655, "age": 1, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 4.71689, "clade": 326, "strain": "A/Shanxi-Xinghualing/121/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 87.0, "attr": {"num_date_confidence": [2016.0164271047229, 2016.0164271047229], "region_confidence": {"china": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Shanxi-Xinghualing/121/2016", "num_date": 2016.0164271047229, "lbi": 0.44474150279221386, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI713571", "division": "shanxi", "avg_age": 31.362554112554115, "authors": "who_chinese_national_influenza_center", "date": "2016-01-07", "gender": "male", "region": "china", "raw_date": "2016-01-07", "country": "china", "div": 0.015917544661764472, "age": 14, "clade_membership": "A1"}}], "yvalue": 87.5, "attr": {"num_date": 2016.0164271047229, "num_date_confidence": [2015.8710885507458, 2016.0164271047229], "region_confidence": {"china": 0.9999999666562499}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 2.649536966273126e-07, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.44474150279221386, "div": 0.015917544608860162, "age": 7.5, "ep": 6, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 4.62867, "clade": 327, "strain": "NODE_0000326", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.70516, "clade": 328, "strain": "NODE_0000327", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 4.88116, "clade": 329, "strain": "A/Henan-Jinshui/1222/2016", "muts": ["C447T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 86.0, "attr": {"num_date_confidence": [2016.1806981519508, 2016.1806981519508], "region_confidence": {"china": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Henan-Jinshui/1222/2016", "num_date": 2016.1806981519508, "lbi": 0.31189251459570366, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI829516", "division": "henan", "avg_age": 31.362554112554115, "authors": "who_chinese_national_influenza_center", "date": "2016-03-07", "gender": "female", "region": "china", "raw_date": "2016-03-07", "country": "china", "div": 0.01650639255243892, "age": 1, "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 4.862, "clade": 330, "strain": "A/England/60920014/2016", "muts": ["G1641A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 85.0, "attr": {"num_date_confidence": [2016.1615331964408, 2016.1615331964408], "region_confidence": {"europe": 1.0}, "age_score": 0.5759270438954873, "strain": "A/England/60920014/2016", "num_date": 2016.1615331964408, "lbi": 0.32719980629749634, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI878665", "division": "england", "avg_age": 31.362554112554115, "authors": "microbiology_services_colindale,_public_health_england", "date": "2016-02-29", "gender": "?", "region": "europe", "raw_date": "2016-02-29", "country": "united_kingdom", "div": 0.016506383940206436, "age": "unknown", "clade_membership": "A1"}}], "yvalue": 85.5, "attr": {"num_date": 2016.0046927630983, "num_date_confidence": [2015.8946815948764, 2016.11219567034], "region_confidence": {"china": 0.9998773795479721}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 0.0005804708070851909, "ne": 7, "glyc": 12, "num_gender": 0.5, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.48428428310981125, "div": 0.015917544661764472, "age": 1.0, "ep": 6, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 4.67926, "clade": 331, "strain": "NODE_0000328", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.73332, "clade": 332, "strain": "NODE_0000329", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 4.75522, "clade": 333, "strain": "A/Nara/20/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 84.0, "attr": {"num_date_confidence": [2016.0547570157426, 2016.0547570157426], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Nara/20/2016", "num_date": 2016.0547570157426, "lbi": 0.44968375288557216, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI772641", "division": "nara", "avg_age": 31.362554112554115, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-01-21", "gender": "female", "region": "japan_korea", "raw_date": "2016-01-21", "country": "japan", "div": 0.01591754476757309, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 4.73332, "clade": 334, "strain": "A/NorthCarolina/4/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 83.0, "attr": {"num_date_confidence": [2016.0328542094455, 2016.0328542094455], "region_confidence": {"north_america": 1.0}, "age_score": 0.5759270438954873, "strain": "A/NorthCarolina/4/2016", "num_date": 2016.0328542094455, "lbi": 0.47499371866401285, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI701956", "division": "north_carolina", "avg_age": 31.362554112554115, "authors": "centers_for_disease_control_and_prevention", "date": "2016-01-13", "gender": "female", "region": "north_america", "raw_date": "2016-01-13", "country": "usa", "div": 0.01591754476757309, "age": 18, "clade_membership": "A1"}}], "yvalue": 83.5, "attr": {"num_date": 2016.0328542094455, "num_date_confidence": [2015.9606370212466, 2016.0328542094455], "region_confidence": {"north_america": 0.9899091400971404}, "region": "north_america", "age_score": 0.5759270438954873, "region_entropy": 0.027187633533682604, "ne": 7, "glyc": 12, "num_gender": 1.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.47499371866401285, "div": 0.01591754471466878, "age": 18.0, "ep": 6, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 4.80348, "clade": 335, "strain": "NODE_0000330", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01769, "tvalue": 5.51908, "clade": 336, "strain": "A/Tasmania/117/2016", "muts": ["A53G", "G1416A", "G1557A"], "aa_muts": {"SigPep": [], "HA1": ["K2R"], "HA2": []}, "yvalue": 82.0, "attr": {"num_date_confidence": [2016.8186173853526, 2016.8186173853526], "region_confidence": {"oceania": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Tasmania/117/2016", "num_date": 2016.8186173853526, "lbi": 0.07710108485128364, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI868952", "division": "tasmania", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-10-26", "gender": "female", "region": "oceania", "raw_date": "2016-10-26", "country": "australia", "div": 0.01768540534234766, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 5.01958, "clade": 337, "strain": "NODE_0000331", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 5.08786, "clade": 338, "strain": "NODE_0000332", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 5.26446, "clade": 339, "strain": "A/Myanmar/16M420/2016", "muts": ["A1005G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 81.0, "attr": {"num_date_confidence": [2016.5639972621493, 2016.5639972621493], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Myanmar/16M420/2016", "num_date": 2016.5639972621493, "lbi": 0.20353978739660197, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI975421", "division": "myanmar", "avg_age": 31.362554112554115, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-07-25", "gender": "male", "region": "southeast_asia", "raw_date": "2016-07-25", "country": "myanmar", "div": 0.01650632516439379, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 5.20205, "clade": 340, "strain": "NODE_0000021", "muts": ["A140G"], "aa_muts": {"SigPep": [], "HA1": ["N31S"], "HA2": []}, "children": [{"xvalue": 0.0171, "tvalue": 5.30279, "clade": 341, "strain": "A/Bangladesh/429/2016", "muts": ["A472G"], "aa_muts": {"SigPep": [], "HA1": ["R142G"], "HA2": []}, "yvalue": 80.0, "attr": {"num_date_confidence": [2016.602327173169, 2016.602327173169], "region_confidence": {"south_asia": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Bangladesh/429/2016", "num_date": 2016.602327173169, "lbi": 0.18494097566015236, "ep": 7, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI865318", "division": "bangladesh", "avg_age": 31.362554112554115, "authors": "centers_for_disease_control_and_prevention", "date": "2016-08-08", "gender": "male", "region": "south_asia", "raw_date": "2016-08-08", "country": "bangladesh", "div": 0.01709504706834794, "age": 5, "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 5.23161, "clade": 342, "strain": "A/Brisbane/1001/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 79.0, "attr": {"num_date_confidence": [2016.5311430527036, 2016.5311430527036], "region_confidence": {"oceania": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Brisbane/1001/2016", "num_date": 2016.5311430527036, "lbi": 0.2209633884890834, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI831738", "division": "queensland", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-07-13", "gender": "?", "region": "oceania", "raw_date": "2016-07-13", "country": "australia", "div": 0.0165063252172981, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 5.23538, "clade": 343, "strain": "NODE_0000333", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 5.63133, "clade": 344, "strain": "A/Anhui-Longzihu/1995/2016", "muts": ["G813A", "G1056A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 78.0, "attr": {"num_date_confidence": [2016.930869267625, 2016.930869267625], "region_confidence": {"china": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Anhui-Longzihu/1995/2016", "num_date": 2016.930869267625, "lbi": 0.08134354544922841, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI885582", "division": "anhui", "avg_age": 31.362554112554115, "authors": "who_chinese_national_influenza_center", "date": "2016-12-06", "gender": "male", "region": "china", "raw_date": "2016-12-06", "country": "china", "div": 0.01768439238053976, "age": 4, "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 5.30279, "clade": 345, "strain": "NODE_0000334", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 5.30279, "clade": 346, "strain": "A/HongKong/2387/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 77.0, "attr": {"num_date_confidence": [2016.602327173169, 2016.602327173169], "region_confidence": {"china": 1.0}, "age_score": 0.5759270438954873, "strain": "A/HongKong/2387/2016", "num_date": 2016.602327173169, "lbi": 0.18494097566015236, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI858889", "division": "hong_kong", "avg_age": 31.362554112554115, "authors": "crick_worldwide_influenza_centre", "date": "2016-08-08", "gender": "female", "region": "china", "raw_date": "2016-08-08", "country": "hong_kong", "div": 0.016506325323106717, "age": 88, "clade_membership": "A1"}}, {"xvalue": 0.0171, "tvalue": 5.57384, "clade": 347, "strain": "A/Sapporo/98/2016", "muts": ["G1056T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 76.0, "attr": {"num_date_confidence": [2016.8733744010951, 2016.8733744010951], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Sapporo/98/2016", "num_date": 2016.8733744010951, "lbi": 0.0939176799970985, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI979654", "division": "hokkaido", "avg_age": 31.362554112554115, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-11-15", "gender": "female", "region": "japan_korea", "raw_date": "2016-11-15", "country": "japan", "div": 0.01709533829099025, "age": 6, "clade_membership": "A1"}}], "yvalue": 76.5, "attr": {"num_date": 2016.602327173169, "num_date_confidence": [2016.5260114094635, 2016.602327173169], "region_confidence": {"china": 0.9999989198950111}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 7.195466044302688e-06, "ne": 8, "glyc": 12, "num_gender": 1.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.18494097566015236, "div": 0.016506325270202408, "age": 47.0, "ep": 6, "clade_membership": "A1"}}], "yvalue": 77.25, "attr": {"num_date": 2016.534919560608, "num_date_confidence": [2016.4729884043795, 2016.590705671964], "region_confidence": {"china": 0.9997077639962536}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 0.0011609960099307644, "ne": 8, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.218887030681592, "div": 0.0165063252172981, "age": 32.666666666666664, "ep": 6, "clade_membership": "A1"}}], "yvalue": 78.75, "attr": {"num_date": 2016.5015849054287, "num_date_confidence": [2016.4213783323285, 2016.5311430527036], "region_confidence": {"oceania": 0.9985454554481957}, "region": "oceania", "age_score": 0.5759270438954873, "region_entropy": 0.0052071830057198055, "ne": 8, "glyc": 12, "num_gender": 0.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.23790998623506637, "div": 0.01650632516439379, "age": 25.75, "ep": 6, "clade_membership": "A1"}}], "yvalue": 79.875, "attr": {"num_date": 2016.3873969170468, "num_date_confidence": [2016.1836226487721, 2016.4790806413098], "region_confidence": {"oceania": 0.9985779793264419}, "region": "oceania", "age_score": 0.5759270438954873, "region_entropy": 0.005161036871492532, "ne": 7, "glyc": 12, "num_gender": -0.16666666666666666, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.3165123824838833, "div": 0.0159175448204774, "age": 25.75, "ep": 6, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 5.1345, "clade": 348, "strain": "NODE_0000335", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 5.20151, "clade": 349, "strain": "NODE_0000336", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01828, "tvalue": 5.77986, "clade": 350, "strain": "A/Amapa/145955-IEC/2017", "muts": ["A111G", "A117G", "A702G", "C1166A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["A44E"]}, "yvalue": 75.0, "attr": {"num_date_confidence": [2017.0793976728269, 2017.0793976728269], "region_confidence": {"south_america": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Amapa/145955-IEC/2017", "num_date": 2017.0793976728269, "lbi": 0.13932523343310702, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "undetermined", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1045814", "division": "amapa", "avg_age": 31.362554112554115, "authors": "evandro_chagas_institute", "date": "2017-01-30", "gender": "male", "region": "south_america", "raw_date": "2017-01-30", "country": "brazil", "div": 0.018275548961753502, "age": 2, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 5.32433, "clade": 351, "strain": "NODE_0000337", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01769, "tvalue": 5.84557, "clade": 352, "strain": "A/Tunisia/2240/2017", "muts": ["C400T", "A946G", "A1401G"], "aa_muts": {"SigPep": [], "HA1": ["I300V"], "HA2": []}, "yvalue": 74.0, "attr": {"num_date_confidence": [2017.145106091718, 2017.145106091718], "region_confidence": {"africa": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Tunisia/2240/2017", "num_date": 2017.145106091718, "lbi": 0.13258810047542868, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "undetermined", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI991759", "division": "tunisia", "avg_age": 31.362554112554115, "authors": "crick_worldwide_influenza_centre", "date": "2017-02-23", "gender": "male", "region": "africa", "raw_date": "2017-02-23", "country": "tunisia", "div": 0.017685255794493256, "age": 51, "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 5.38766, "clade": 353, "strain": "A/Newcastle/170/2016", "muts": ["T987C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 73.0, "attr": {"num_date_confidence": [2016.6872005475702, 2016.6872005475702], "region_confidence": {"oceania": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Newcastle/170/2016", "num_date": 2016.6872005475702, "lbi": 0.25067465665596655, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI869475", "division": "new_south_wales", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-09-08", "gender": "?", "region": "oceania", "raw_date": "2016-09-08", "country": "australia", "div": 0.016506322679423115, "age": "unknown", "clade_membership": "A1"}}], "yvalue": 73.5, "attr": {"num_date": 2016.623867550892, "num_date_confidence": [2016.463108170756, 2016.6750043999962], "region_confidence": {"oceania": 0.9995219157158158}, "region": "oceania", "age_score": 0.5759270438954873, "region_entropy": 0.0020412406550416556, "ne": 7, "glyc": 12, "num_gender": -0.5, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.293679313446796, "div": 0.01591754492628602, "age": 51.0, "ep": 6, "clade_membership": "A1"}}], "yvalue": 74.25, "attr": {"num_date": 2016.5010516292566, "num_date_confidence": [2016.3524122465526, 2016.6177320223592], "region_confidence": {"oceania": 0.9988733872811616}, "region": "oceania", "age_score": 0.5759270438954873, "region_entropy": 0.0042881541670410925, "ne": 7, "glyc": 12, "num_gender": -0.6666666666666666, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.3445482485196406, "div": 0.01591754487338171, "age": 26.5, "ep": 6, "clade_membership": "A1"}}, {"xvalue": 0.01592, "tvalue": 5.22613, "clade": 354, "strain": "NODE_0000338", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01592, "tvalue": 5.22613, "clade": 355, "strain": "A/Bangladesh/2007/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 72.0, "attr": {"num_date_confidence": [2016.5256673511294, 2016.5256673511294], "region_confidence": {"south_asia": 1.0}, "age_score": 0.5759270438954873, "strain": "A/Bangladesh/2007/2016", "num_date": 2016.5256673511294, "lbi": 0.2800622414631586, "ep": 6, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI832349", "division": "bangladesh", "avg_age": 31.362554112554115, "authors": "centers_for_disease_control_and_prevention", "date": "2016-07-11", "gender": "female", "region": "south_asia", "raw_date": "2016-07-11", "country": "bangladesh", "div": 0.01591754492628602, "age": 2, "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 5.40999, "clade": 356, "strain": "NODE_0000017", "muts": ["G830A"], "aa_muts": {"SigPep": [], "HA1": ["R261Q"], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 5.66145, "clade": 357, "strain": "A/SriLanka/45/2016", "muts": ["T66C", "T1173C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 71.0, "attr": {"num_date_confidence": [2016.9609856262834, 2016.9609856262834], "region_confidence": {"south_asia": 1.0}, "age_score": 0.5759270438954873, "strain": "A/SriLanka/45/2016", "num_date": 2016.9609856262834, "lbi": 0.09432216233832151, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI919312", "division": "sri_lanka", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-12-17", "gender": "female", "region": "south_asia", "raw_date": "2016-12-17", "country": "sri_lanka", "div": 0.017684440341279254, "age": 4, "clade_membership": "A1"}}, {"xvalue": 0.0171, "tvalue": 5.58753, "clade": 358, "strain": "A/SriLanka/36/2016", "muts": ["C1101T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 70.0, "attr": {"num_date_confidence": [2016.8870636550307, 2016.8870636550307], "region_confidence": {"south_asia": 1.0}, "age_score": 0.5759270438954873, "strain": "A/SriLanka/36/2016", "num_date": 2016.8870636550307, "lbi": 0.11346802845885516, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI989632", "division": "sri_lanka", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-11-20", "gender": "?", "region": "south_asia", "raw_date": "2016-11-20", "country": "sri_lanka", "div": 0.01709529055190721, "age": 26, "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 5.49444, "clade": 359, "strain": "NODE_0000339", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 5.70046, "clade": 360, "strain": "A/SriLanka/1/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 69.0, "attr": {"num_date_confidence": [2017.0, 2017.0], "region_confidence": {"south_asia": 1.0}, "age_score": 0.5759270438954873, "strain": "A/SriLanka/1/2017", "num_date": 2017.0, "lbi": 0.08555677984020181, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI919192", "division": "sri_lanka", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2017-01-01", "gender": "female", "region": "south_asia", "raw_date": "2017-01-01", "country": "sri_lanka", "div": 0.016506384257632293, "age": 4, "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 5.49444, "clade": 361, "strain": "A/SriLanka/31/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 68.0, "attr": {"num_date_confidence": [2016.7939767282683, 2016.7939767282683], "region_confidence": {"south_asia": 1.0}, "age_score": 0.5759270438954873, "strain": "A/SriLanka/31/2016", "num_date": 2016.7939767282683, "lbi": 0.14319945183609817, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI919309", "division": "sri_lanka", "avg_age": 31.362554112554115, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2016-10-17", "gender": "?", "region": "south_asia", "raw_date": "2016-10-17", "country": "sri_lanka", "div": 0.016506384257632293, "age": 12, "clade_membership": "A1"}}], "yvalue": 68.5, "attr": {"num_date": 2016.7939767282683, "num_date_confidence": [2016.6978753037058, 2016.7939767282683], "region_confidence": {"south_asia": 0.9999999999999988}, "region": "south_asia", "age_score": 0.5759270438954873, "region_entropy": 2.1956400439396998e-14, "ne": 7, "glyc": 12, "num_gender": 0.5, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.14319945183609817, "div": 0.016506384204727984, "age": 8.0, "ep": 7, "clade_membership": "A1"}}], "yvalue": 69.83333, "attr": {"num_date": 2016.7095259233583, "num_date_confidence": [2016.601802295787, 2016.785861189968], "region_confidence": {"south_asia": 0.9999999999999997}, "region": "south_asia", "age_score": 0.5759270438954873, "region_entropy": 7.468046856028988e-15, "ne": 7, "glyc": 12, "num_gender": 0.5, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.17686123443161325, "div": 0.016506384151823674, "age": 11.5, "ep": 7, "clade_membership": "A1"}}], "yvalue": 70.91667, "attr": {"num_date": 2016.5256673511294, "num_date_confidence": [2016.392797772472, 2016.5256673511294], "region_confidence": {"south_asia": 0.9999998690277957}, "region": "south_asia", "age_score": 0.5759270438954873, "region_entropy": 9.586661472982936e-07, "ne": 7, "glyc": 12, "num_gender": 0.6, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.2800622414631586, "div": 0.01591754487338171, "age": 9.6, "ep": 6, "clade_membership": "A1"}}], "yvalue": 72.58333, "attr": {"num_date": 2016.4340356166701, "num_date_confidence": [2016.2380781855875, 2016.5101969978707], "region_confidence": {"oceania": 0.9985814189570463}, "region": "oceania", "age_score": 0.5759270438954873, "region_entropy": 0.00505710428739303, "ne": 7, "glyc": 12, "num_gender": 0.125, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.35216196779674847, "div": 0.0159175448204774, "age": 14.428571428571429, "ep": 6, "clade_membership": "A1"}}], "yvalue": 76.22917, "attr": {"num_date": 2016.3191197886608, "num_date_confidence": [2016.0782590932395, 2016.4127873052269], "region_confidence": {"oceania": 0.9986462663946618}, "region": "oceania", "age_score": 0.5759270438954873, "region_entropy": 0.004880304722942846, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.3754236737719636, "div": 0.01591754476757309, "age": 18.545454545454547, "ep": 6, "clade_membership": "A1"}}], "yvalue": 79.11458, "attr": {"num_date": 2016.1030156005518, "num_date_confidence": [2015.9494965595911, 2016.2936816786819], "region_confidence": {"oceania": 0.9983476605821013}, "region": "oceania", "age_score": 0.5759270438954873, "region_entropy": 0.005971325580826216, "ne": 7, "glyc": 12, "num_gender": 0.06666666666666667, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.4613337788278698, "div": 0.01591754471466878, "age": 18.545454545454547, "ep": 6, "clade_membership": "A1"}}], "yvalue": 81.30729, "attr": {"num_date": 2015.9787927783802, "num_date_confidence": [2015.8953899218945, 2016.0266807952476], "region_confidence": {"oceania": 0.1737333164452748, "china": 0.42776893602595656, "north_america": 0.39514919249973995}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 0.4577035987354765, "ne": 7, "glyc": 12, "num_gender": 0.17647058823529413, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.5437312819145632, "div": 0.015917544661764472, "age": 18.5, "ep": 6, "clade_membership": "A1"}}], "yvalue": 83.40365, "attr": {"num_date": 2015.9282079764566, "num_date_confidence": [2015.8216430126258, 2015.9980639990567], "region_confidence": {"china": 0.9998892522974582}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 0.0005361671596042624, "ne": 7, "glyc": 12, "num_gender": 0.21052631578947367, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.5863307573533264, "div": 0.015917544608860162, "age": 17.153846153846153, "ep": 6, "clade_membership": "A1"}}], "yvalue": 85.45182, "attr": {"num_date": 2015.866873134833, "num_date_confidence": [2015.7349320522148, 2015.9505685154436], "region_confidence": {"china": 0.9999996832121701}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 2.3309059736389563e-06, "ne": 7, "glyc": 12, "num_gender": 0.19047619047619047, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.6463739107228831, "div": 0.015917544555955853, "age": 15.866666666666667, "ep": 6, "clade_membership": "A1"}}], "yvalue": 89.33008, "attr": {"num_date": 2015.7218257713264, "num_date_confidence": [2015.622013080067, 2015.8865471858999], "region_confidence": {"china": 0.9999731877425349}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 0.00013718162269952484, "ne": 7, "glyc": 12, "num_gender": 0.17857142857142858, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.8333485656834932, "div": 0.015917544503051544, "age": 24.57894736842105, "ep": 6, "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 4.40505, "clade": 362, "strain": "NODE_0000031", "muts": ["G1206A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01651, "tvalue": 4.58774, "clade": 363, "strain": "NODE_0000340", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01828, "tvalue": 5.08924, "clade": 364, "strain": "A/Oman/4800/2016", "muts": ["A1002T", "C1339A", "A1575G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["L102M"]}, "yvalue": 67.0, "attr": {"num_date_confidence": [2016.3887748117727, 2016.3887748117727], "region_confidence": {"west_asia": 1.0}, "age_score": 0.04174982170526464, "strain": "A/Oman/4800/2016", "num_date": 2016.3887748117727, "lbi": 0.16645124240979567, "ep": 6, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI814357", "division": "oman", "avg_age": 33.89833333333333, "authors": "centers_for_disease_control_and_prevention", "date": "2016-05-22", "gender": "female", "region": "west_asia", "raw_date": "2016-05-22", "country": "oman", "div": 0.01827561209325808, "age": 65, "clade_membership": "A1"}}, {"xvalue": 0.01651, "tvalue": 4.80832, "clade": 365, "strain": "NODE_0000341", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01827, "tvalue": 5.70046, "clade": 366, "strain": "A/Catalonia/NSVH100562706/2017", "muts": ["G46A", "G419A", "A430G"], "aa_muts": {"SigPep": ["A16T"], "HA1": ["S124N", "T128A"], "HA2": []}, "yvalue": 66.0, "attr": {"num_date_confidence": [2017.0, 2017.5390066676712], "region_confidence": {"europe": 1.0}, "age_score": 0.04174982170526464, "strain": "A/Catalonia/NSVH100562706/2017", "num_date": 2017.0, "lbi": 0.03611251414869022, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 10, "num_gender": 0, "rb": 2, "isolate_id": "EPI919648", "division": "catalonia", "avg_age": 33.89833333333333, "authors": "hospital_universitari_vall_d_hebron", "date": "2017-01-01", "gender": "?", "region": "europe", "raw_date": "2017-XX-XX", "country": "spain", "div": 0.01827442114023707, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01827, "tvalue": 5.33017, "clade": 367, "strain": "A/Norway/4093/2016", "muts": ["T285C", "A444G", "A472G"], "aa_muts": {"SigPep": [], "HA1": ["R142G"], "HA2": []}, "yvalue": 65.0, "attr": {"num_date_confidence": [2016.6297056810404, 2016.6297056810404], "region_confidence": {"europe": 1.0}, "age_score": 0.04174982170526464, "strain": "A/Norway/4093/2016", "num_date": 2016.6297056810404, "lbi": 0.0911380376994935, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI831991", "division": "norway", "avg_age": 33.89833333333333, "authors": "norwegian_institute_of_public_health", "date": "2016-08-18", "gender": "male", "region": "europe", "raw_date": "2016-08-18", "country": "norway", "div": 0.018274059986807128, "age": 15, "clade_membership": "A1"}}], "yvalue": 65.5, "attr": {"num_date": 2016.1078550804468, "num_date_confidence": [2015.8942920561012, 2016.4332112868685], "region_confidence": {"europe": 0.9999687280957467}, "region": "europe", "age_score": 0.04174982170526464, "region_entropy": 0.0001555262463214783, "ne": 7, "glyc": 12, "num_gender": -0.5, "avg_age": 33.89833333333333, "rb": 2, "lbi": 0.3359632424370324, "div": 0.016506383834397818, "age": 15.0, "ep": 6, "clade_membership": "A1"}}], "yvalue": 66.25, "attr": {"num_date": 2015.8872811853125, "num_date_confidence": [2015.7201170132712, 2016.1324963256739], "region_confidence": {"europe": 0.9593374463166837, "west_asia": 0.04020365893091542}, "region": "europe", "age_score": 0.04174982170526464, "region_entropy": 0.07514827853619056, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 33.89833333333333, "rb": 2, "lbi": 0.5831453646574523, "div": 0.01650638378149351, "age": 40.0, "ep": 6, "clade_membership": "A1"}}, {"xvalue": 0.0171, "tvalue": 4.45842, "clade": 368, "strain": "NODE_0000034", "muts": ["C411A"], "aa_muts": {"SigPep": [], "HA1": ["N121K"], "HA2": []}, "children": [{"xvalue": 0.01945, "tvalue": 4.94139, "clade": 369, "strain": "A/Newcastle/30/2016", "muts": ["G96A", "A412G", "T499C", "A753G"], "aa_muts": {"SigPep": [], "HA1": ["N122D"], "HA2": []}, "yvalue": 64.0, "attr": {"num_date_confidence": [2016.2409308692677, 2016.2409308692677], "region_confidence": {"oceania": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Newcastle/30/2016", "num_date": 2016.2409308692677, "lbi": 0.28115781984940114, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI866686", "division": "new_south_wales", "avg_age": 33.64409722222222, "authors": "centers_for_disease_control_and_prevention", "date": "2016-03-29", "gender": "female", "region": "oceania", "raw_date": "2016-03-29", "country": "australia", "div": 0.019453392429192546, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.02064, "tvalue": 5.42873, "clade": 370, "strain": "A/Hawaii/80/2016", "muts": ["T25C", "A220G", "T270C", "G473A", "A1035G", "A1065T"], "aa_muts": {"SigPep": ["Y9H"], "HA1": ["I58V", "R142K"], "HA2": []}, "yvalue": 63.0, "attr": {"num_date_confidence": [2016.7282683093772, 2016.7282683093772], "region_confidence": {"north_america": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Hawaii/80/2016", "num_date": 2016.7282683093772, "lbi": 0.08314387558256695, "ep": 8, "region_entropy": -0.0, "ne": 9, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI857206", "division": "hawaii", "avg_age": 33.64409722222222, "authors": "centers_for_disease_control_and_prevention", "date": "2016-09-23", "gender": "male", "region": "north_america", "raw_date": "2016-09-23", "country": "usa", "div": 0.020637000391889905, "age": 54, "clade_membership": "A1"}}, {"xvalue": 0.01886, "tvalue": 4.88664, "clade": 371, "strain": "A/Jordan/20346/2016", "muts": ["A81G", "A451G", "G1087A"], "aa_muts": {"SigPep": [], "HA1": ["T135A"], "HA2": ["V18M"]}, "yvalue": 62.0, "attr": {"num_date_confidence": [2016.186173853525, 2016.186173853525], "region_confidence": {"west_asia": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Jordan/20346/2016", "num_date": 2016.186173853525, "lbi": 0.32240505426386695, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 11, "num_gender": 0, "rb": 2, "isolate_id": "EPI769497", "division": "jordan", "avg_age": 33.64409722222222, "authors": "crick_worldwide_influenza_centre", "date": "2016-03-09", "gender": "?", "region": "west_asia", "raw_date": "2016-03-09", "country": "jordan", "div": 0.018863308624306394, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01946, "tvalue": 4.95235, "clade": 372, "strain": "A/Stockholm/26/2016", "muts": ["A249G", "T912A", "G1428A", "C1662T"], "aa_muts": {"SigPep": [], "HA1": ["I67M"], "HA2": []}, "yvalue": 61.0, "attr": {"num_date_confidence": [2016.2518822724162, 2016.2518822724162], "region_confidence": {"europe": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Stockholm/26/2016", "num_date": 2016.2518822724162, "lbi": 0.27356455865511087, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI753315", "division": "stockholm", "avg_age": 33.64409722222222, "authors": "swedish_institute_for_infectious_disease_control", "date": "2016-04-02", "gender": "female", "region": "europe", "raw_date": "2016-04-02", "country": "sweden", "div": 0.019455021788707033, "age": 50, "clade_membership": "A1"}}, {"xvalue": 0.01945, "tvalue": 4.78807, "clade": 373, "strain": "A/Singapore/INFKK-16-0123/2016", "muts": ["G294A", "A560G", "G945A", "G1577A"], "aa_muts": {"SigPep": [], "HA1": ["K171R"], "HA2": ["G181E"]}, "yvalue": 60.0, "attr": {"num_date_confidence": [2016.0876112251883, 2016.0876112251883], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Singapore/INFKK-16-0123/2016", "num_date": 2016.0876112251883, "lbi": 0.4124913592770477, "ep": 7, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI780672", "division": "singapore", "avg_age": 33.64409722222222, "authors": "ministry_of_health,_singapore", "date": "2016-02-02", "gender": "female", "region": "southeast_asia", "raw_date": "2016-02-02", "country": "singapore", "div": 0.01945387480657054, "age": 1, "clade_membership": "A1"}}, {"xvalue": 0.01768, "tvalue": 4.58789, "clade": 374, "strain": "NODE_0000045", "muts": ["C204T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02004, "tvalue": 4.94687, "clade": 375, "strain": "A/Mayotte/2093/2016", "muts": ["A63G", "C627T", "G945A", "T1275C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 59.0, "attr": {"num_date_confidence": [2016.2464065708418, 2016.2464065708418], "region_confidence": {"africa": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Mayotte/2093/2016", "num_date": 2016.2464065708418, "lbi": 0.27733520313796856, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI978994", "division": "mayotte", "avg_age": 33.64409722222222, "authors": "crick_worldwide_influenza_centre", "date": "2016-03-31", "gender": "female", "region": "africa", "raw_date": "2016-03-31", "country": "mayotte", "div": 0.020042882340745808, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.02005, "tvalue": 4.96056, "clade": 376, "strain": "A/Antananarivo/1067/2016", "muts": ["C527A", "G605T", "C704T", "T725G"], "aa_muts": {"SigPep": [], "HA1": ["T160K", "G186V", "S219F", "I226S"], "HA2": []}, "yvalue": 58.0, "attr": {"num_date_confidence": [2016.2600958247776, 2016.2600958247776], "region_confidence": {"africa": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Antananarivo/1067/2016", "num_date": 2016.2600958247776, "lbi": 0.2680044967732811, "ep": 10, "region_entropy": -0.0, "ne": 6, "passage": "egg", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1055933", "division": "antananarivo", "avg_age": 33.64409722222222, "authors": "centers_for_disease_control_and_prevention", "date": "2016-04-05", "gender": "male", "region": "africa", "raw_date": "2016-04-05", "country": "madagascar", "div": 0.02004514924087001, "age": 25, "clade_membership": "A1"}}, {"xvalue": 0.02063, "tvalue": 5.56562, "clade": 377, "strain": "A/Kenya/115/2016", "muts": ["G364A", "G375A", "G830A", "C1101T", "A1683G"], "aa_muts": {"SigPep": [], "HA1": ["A106T", "R261Q"], "HA2": []}, "yvalue": 57.0, "attr": {"num_date_confidence": [2016.8651608487337, 2016.8651608487337], "region_confidence": {"africa": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Kenya/115/2016", "num_date": 2016.8651608487337, "lbi": 0.05904744064194768, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI924831", "division": "kenya", "avg_age": 33.64409722222222, "authors": "centers_for_disease_control_and_prevention", "date": "2016-11-12", "gender": "?", "region": "africa", "raw_date": "2016-11-12", "country": "kenya", "div": 0.020634107310262623, "age": "unknown", "clade_membership": "A1"}}], "yvalue": 58.0, "attr": {"num_date": 2015.8874288843417, "num_date_confidence": [2015.7924285847248, 2016.025425666852], "region_confidence": {"africa": 0.9999998659717256}, "region": "africa", "age_score": 0.07001463870520458, "region_entropy": 9.897173735400568e-07, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 33.64409722222222, "rb": 2, "lbi": 0.6803933660935333, "div": 0.017684295344412394, "age": 25.0, "ep": 7, "clade_membership": "A1"}}, {"xvalue": 0.0171, "tvalue": 4.60167, "clade": 378, "strain": "NODE_0000342", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 4.85378, "clade": 379, "strain": "A/Dnipro/583/2016", "muts": ["G62A"], "aa_muts": {"SigPep": [], "HA1": ["G5E"], "HA2": []}, "yvalue": 56.0, "attr": {"num_date_confidence": [2016.1533196440794, 2016.1533196440794], "region_confidence": {"south_asia": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Dnipro/583/2016", "num_date": 2016.1533196440794, "lbi": 0.3500038698443667, "ep": 7, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI773603", "division": "bangladesh", "avg_age": 33.64409722222222, "authors": "crick_worldwide_influenza_centre", "date": "2016-02-26", "gender": "male", "region": "south_asia", "raw_date": "2016-02-26", "country": "bangladesh", "div": 0.017684286504262164, "age": 4, "clade_membership": "A1"}}, {"xvalue": 0.0171, "tvalue": 4.76853, "clade": 380, "strain": "NODE_0000343", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 5.11388, "clade": 381, "strain": "NODE_0000037", "muts": ["G609T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 5.11388, "clade": 382, "strain": "A/Tokyo/16161/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 55.0, "attr": {"num_date_confidence": [2016.413415468857, 2016.413415468857], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Tokyo/16161/2016", "num_date": 2016.413415468857, "lbi": 0.1826742750555463, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI854216", "division": "tokyo", "avg_age": 33.64409722222222, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-05-31", "gender": "female", "region": "japan_korea", "raw_date": "2016-05-31", "country": "japan", "div": 0.01768451931650545, "age": 18, "clade_membership": "A1"}}, {"xvalue": 0.01768, "tvalue": 5.12483, "clade": 383, "strain": "A/Sapporo/89/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 54.0, "attr": {"num_date_confidence": [2016.4243668720055, 2016.4243668720055], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Sapporo/89/2016", "num_date": 2016.4243668720055, "lbi": 0.1777407701481695, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI854220", "division": "hokkaido", "avg_age": 33.64409722222222, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-06-04", "gender": "female", "region": "japan_korea", "raw_date": "2016-06-04", "country": "japan", "div": 0.01768451931650545, "age": 21, "clade_membership": "A1"}}], "yvalue": 54.5, "attr": {"num_date": 2016.413415468857, "num_date_confidence": [2016.2341127232462, 2016.413415468857], "region_confidence": {"japan_korea": 0.9999999979854858}, "region": "japan_korea", "age_score": 0.07001463870520458, "region_entropy": 1.8821965336857933e-08, "ne": 7, "glyc": 12, "num_gender": 1.0, "avg_age": 33.64409722222222, "rb": 2, "lbi": 0.1826742750555463, "div": 0.01768451926360114, "age": 19.5, "ep": 7, "clade_membership": "A1"}}, {"xvalue": 0.0171, "tvalue": 4.85104, "clade": 384, "strain": "NODE_0000344", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0171, "tvalue": 4.85104, "clade": 385, "strain": "A/Algeria/G0543/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 53.0, "attr": {"num_date_confidence": [2016.1505817932923, 2016.1505817932923], "region_confidence": {"africa": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Algeria/G0543/2016", "num_date": 2016.1505817932923, "lbi": 0.352407733159673, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI758684", "division": "algeria", "avg_age": 33.64409722222222, "authors": "crick_worldwide_influenza_centre", "date": "2016-02-25", "gender": "male", "region": "africa", "raw_date": "2016-02-25", "country": "algeria", "div": 0.01709535948669391, "age": 27, "clade_membership": "A1"}}, {"xvalue": 0.0171, "tvalue": 4.94961, "clade": 386, "strain": "A/Dnipro/769/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 52.0, "attr": {"num_date_confidence": [2016.2491444216291, 2016.2491444216291], "region_confidence": {"south_asia": 1.0}, "age_score": 0.07001463870520458, "strain": "A/Dnipro/769/2016", "num_date": 2016.2491444216291, "lbi": 0.2754434287579226, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI775600", "division": "bangladesh", "avg_age": 33.64409722222222, "authors": "centers_for_disease_control_and_prevention", "date": "2016-04-01", "gender": "male", "region": "south_asia", "raw_date": "2016-04-01", "country": "bangladesh", "div": 0.01709535948669391, "age": 5, "clade_membership": "A1"}}], "yvalue": 52.5, "attr": {"num_date": 2016.1505817932923, "num_date_confidence": [2016.0400012106802, 2016.1505817932923], "region_confidence": {"africa": 0.18171919831270103, "south_asia": 0.8181684935665999}, "region": "south_asia", "age_score": 0.07001463870520458, "region_entropy": 0.2063717820236392, "ne": 7, "glyc": 12, "num_gender": -1.0, "avg_age": 33.64409722222222, "rb": 2, "lbi": 0.352407733159673, "div": 0.0170953594337896, "age": 16.0, "ep": 7, "clade_membership": "A1"}}], "yvalue": 53.5, "attr": {"num_date": 2016.0680641795493, "num_date_confidence": [2015.9196636281672, 2016.1362648372178], "region_confidence": {"japan_korea": 0.027961695173551685, "europe": 0.022855111949269202, "africa": 0.11663388102587513, "south_asia": 0.8315572560562}, "region": "south_asia", "age_score": 0.07001463870520458, "region_entropy": 0.2594617360480673, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 33.64409722222222, "rb": 2, "lbi": 0.433149473337366, "div": 0.01709535938088529, "age": 17.75, "ep": 7, "clade_membership": "A1"}}], "yvalue": 54.75, "attr": {"num_date": 2015.9012074681941, "num_date_confidence": [2015.7847388728883, 2016.0600744293197], "region_confidence": {"europe": 0.08002148836125927, "africa": 0.04136292919125757, "south_asia": 0.8652755076198826}, "region": "south_asia", "age_score": 0.07001463870520458, "region_entropy": 0.22788125313546478, "ne": 7, "glyc": 12, "num_gender": -0.2, "avg_age": 33.64409722222222, "rb": 2, "lbi": 0.6573552914857148, "div": 0.01709535932798098, "age": 15.0, "ep": 7, "clade_membership": "A1"}}, {"xvalue": 0.0171, "tvalue": 4.48195, "clade": 387, "strain": "NODE_0000047", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 4.80029, "clade": 388, "strain": "NODE_0000345", "muts": ["A472G"], "aa_muts": {"SigPep": [], "HA1": ["R142G"], "HA2": []}, "children": [{"xvalue": 0.01768, "tvalue": 4.84568, "clade": 389, "strain": "NODE_0000346", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01886, "tvalue": 5.51634, "clade": 390, "strain": "A/Lao/F3572/2016", "muts": ["T1122C", "G1557A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 51.0, "attr": {"num_date_confidence": [2016.8158795345653, 2016.8158795345653], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Lao/F3572/2016", "num_date": 2016.8158795345653, "lbi": 0.10553359116300995, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI904142", "division": "laos", "avg_age": 36.1517094017094, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-10-25", "gender": "female", "region": "southeast_asia", "raw_date": "2016-10-25", "country": "laos", "div": 0.018862348458312046, "age": 3, "clade_membership": "A1"}}, {"xvalue": 0.02182, "tvalue": 5.96877, "clade": 391, "strain": "A/Santiago/27820/2017", "muts": ["G40A", "A121G", "A123G", "A563G", "A566G", "C1542T", "A1651T"], "aa_muts": {"SigPep": ["V14I"], "HA1": ["I25V", "E172G", "Q173R"], "HA2": ["I206F"]}, "yvalue": 50.0, "attr": {"num_date_confidence": [2017.2683093771388, 2017.2683093771388], "region_confidence": {"south_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Santiago/27820/2017", "num_date": 2017.2683093771388, "lbi": 0.12194220201862904, "ep": 10, "region_entropy": -0.0, "ne": 10, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1016437", "division": "santiago", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-04-09", "gender": "female", "region": "south_america", "raw_date": "2017-04-09", "country": "chile", "div": 0.021817608849923762, "age": 2, "clade_membership": "A1"}}], "yvalue": 50.5, "attr": {"num_date": 2016.1452124352388, "num_date_confidence": [2015.9979546919242, 2016.561074553326], "region_confidence": {"south_america": 0.9986540435870581}, "region": "south_america", "age_score": 0.11964039887546708, "region_entropy": 0.004877465906853587, "ne": 7, "glyc": 12, "num_gender": 1.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.564362655014331, "div": 0.017684228080790527, "age": 2.5, "ep": 8, "clade_membership": "A1"}}, {"xvalue": 0.01945, "tvalue": 5.20135, "clade": 392, "strain": "NODE_0000051", "muts": ["A792G", "T1158G", "C1308T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02122, "tvalue": 5.57384, "clade": 393, "strain": "A/Delaware/32/2016", "muts": ["G354A", "C420T", "C452A"], "aa_muts": {"SigPep": [], "HA1": ["T135K"], "HA2": []}, "yvalue": 49.0, "attr": {"num_date_confidence": [2016.8733744010951, 2016.8733744010951], "region_confidence": {"north_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Delaware/32/2016", "num_date": 2016.8733744010951, "lbi": 0.13225020217054248, "ep": 9, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1035199", "division": "delaware", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2016-11-15", "gender": "female", "region": "north_america", "raw_date": "2016-11-15", "country": "usa", "div": 0.02122072611939581, "age": 15, "clade_membership": "A1"}}, {"xvalue": 0.02063, "tvalue": 5.3685, "clade": 394, "strain": "A/Bangladesh/3001/2016", "muts": ["A417G", "T606C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 48.0, "attr": {"num_date_confidence": [2016.6680355920603, 2016.6680355920603], "region_confidence": {"south_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Bangladesh/3001/2016", "num_date": 2016.6680355920603, "lbi": 0.22097346402515558, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI861942", "division": "bangladesh", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2016-09-01", "gender": "female", "region": "south_asia", "raw_date": "2016-09-01", "country": "bangladesh", "div": 0.020630431267351392, "age": 27, "clade_membership": "A1"}}, {"xvalue": 0.02122, "tvalue": 5.40409, "clade": 395, "strain": "A/Guyane/2780/2016", "muts": ["A519G", "G1056A", "C1637T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["A201V"]}, "yvalue": 47.0, "attr": {"num_date_confidence": [2016.7036276522929, 2016.7036276522929], "region_confidence": {"south_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Guyane/2780/2016", "num_date": 2016.7036276522929, "lbi": 0.2021606081715163, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI856705", "division": "french_guiana", "avg_age": 36.1517094017094, "authors": "institut_pasteur", "date": "2016-09-14", "gender": "female", "region": "south_america", "raw_date": "2016-09-14", "country": "french_guiana", "div": 0.02122031562795981, "age": 11, "clade_membership": "A1"}}, {"xvalue": 0.01945, "tvalue": 5.32745, "clade": 396, "strain": "NODE_0000347", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02063, "tvalue": 5.60669, "clade": 397, "strain": "A/Guyane/501/2016", "muts": ["A108G", "G571A"], "aa_muts": {"SigPep": [], "HA1": ["D175N"], "HA2": []}, "yvalue": 46.0, "attr": {"num_date_confidence": [2016.9062286105407, 2016.9062286105407], "region_confidence": {"south_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Guyane/501/2016", "num_date": 2016.9062286105407, "lbi": 0.14340166294645568, "ep": 9, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI924887", "division": "french_guiana", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2016-11-27", "gender": "male", "region": "south_america", "raw_date": "2016-11-27", "country": "french_guiana", "div": 0.020630554115988273, "age": 64, "clade_membership": "A1"}}, {"xvalue": 0.01945, "tvalue": 5.47244, "clade": 398, "strain": "NODE_0000348", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02181, "tvalue": 5.92497, "clade": 399, "strain": "A/Singapore/TT0348/2017", "muts": ["G171A", "G375A", "G882A", "G1125A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 45.0, "attr": {"num_date_confidence": [2017.2245037645448, 2017.2245037645448], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Singapore/TT0348/2017", "num_date": 2017.2245037645448, "lbi": 0.12457246843751464, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1023776", "division": "singapore", "avg_age": 36.1517094017094, "authors": "ministry_of_health,_singapore", "date": "2017-03-24", "gender": "female", "region": "southeast_asia", "raw_date": "2017-03-24", "country": "singapore", "div": 0.021810766765524386, "age": 66, "clade_membership": "A1"}}, {"xvalue": 0.02004, "tvalue": 5.64776, "clade": 400, "strain": "A/Guyane/590/2016", "muts": ["G978A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 44.0, "attr": {"num_date_confidence": [2016.9472963723476, 2016.9472963723476], "region_confidence": {"south_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Guyane/590/2016", "num_date": 2016.9472963723476, "lbi": 0.15777727821883816, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI924935", "division": "french_guiana", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2016-12-12", "gender": "male", "region": "south_america", "raw_date": "2016-12-12", "country": "french_guiana", "div": 0.02004138451203012, "age": 22, "clade_membership": "A1"}}], "yvalue": 44.5, "attr": {"num_date": 2016.7719797767622, "num_date_confidence": [2016.5701961459822, 2016.8794818396418], "region_confidence": {"south_america": 0.9999795253683418}, "region": "south_america", "age_score": 0.11964039887546708, "region_entropy": 0.0001050067206024988, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.24456372184422628, "div": 0.01945260405698004, "age": 44.0, "ep": 8, "clade_membership": "A1"}}], "yvalue": 45.25, "attr": {"num_date": 2016.6269828020384, "num_date_confidence": [2016.4679756750354, 2016.7691265997132], "region_confidence": {"south_america": 0.9999999828523015}, "region": "south_america", "age_score": 0.11964039887546708, "region_entropy": 1.4080689287802403e-07, "ne": 7, "glyc": 12, "num_gender": -0.3333333333333333, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.28823151995189367, "div": 0.01945260400407573, "age": 50.666666666666664, "ep": 8, "clade_membership": "A1"}}], "yvalue": 47.3125, "attr": {"num_date": 2016.5008920523767, "num_date_confidence": [2016.367486311257, 2016.5757835239579], "region_confidence": {"south_america": 0.999999795660362}, "region": "south_america", "age_score": 0.11964039887546708, "region_entropy": 1.5592162778933871e-06, "ne": 7, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.3355937903298565, "div": 0.019452603951171422, "age": 34.166666666666664, "ep": 8, "clade_membership": "A1"}}], "yvalue": 48.90625, "attr": {"num_date": 2016.0998296690811, "num_date_confidence": [2015.8599238097297, 2016.268983503021], "region_confidence": {"south_america": 0.9986609291614148}, "region": "south_america", "age_score": 0.11964039887546708, "region_entropy": 0.004869402035387613, "ne": 7, "glyc": 12, "num_gender": 0.5, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.6096153427188035, "div": 0.017684228027886217, "age": 26.25, "ep": 8, "clade_membership": "A1"}}, {"xvalue": 0.01768, "tvalue": 4.59319, "clade": 401, "strain": "NODE_0000056", "muts": ["G1484A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["G150E"]}, "children": [{"xvalue": 0.02123, "tvalue": 5.15221, "clade": 402, "strain": "A/Singapore/Infimh-16-0019/2016", "muts": ["A472G", "C527A", "T629C", "C1195A", "A1536G", "G1578A"], "aa_muts": {"SigPep": [], "HA1": ["R142G", "T160K", "L194P"], "HA2": []}, "yvalue": 43.0, "attr": {"num_date_confidence": [2016.4517453798767, 2016.4517453798767], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Singapore/Infimh-16-0019/2016", "num_date": 2016.4517453798767, "lbi": 0.2103358018649445, "ep": 9, "region_entropy": -0.0, "ne": 7, "passage": "egg", "glyc": 11, "num_gender": 0, "rb": 2, "isolate_id": "EPI1047604", "division": "singapore", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2016-06-14", "gender": "?", "region": "southeast_asia", "raw_date": "2016-06-14", "country": "singapore", "div": 0.021225683499892824, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01827, "tvalue": 4.71221, "clade": 403, "strain": "NODE_0000057", "muts": ["C114T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02004, "tvalue": 5.50885, "clade": 404, "strain": "NODE_0000058", "muts": ["C393T", "A472G", "A772G"], "aa_muts": {"SigPep": [], "HA1": ["R142G", "I242V"], "HA2": []}, "children": [{"xvalue": 0.02004, "tvalue": 5.62859, "clade": 405, "strain": "A/Alberta/RV0055/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 42.0, "attr": {"num_date_confidence": [2016.9281314168377, 2016.9281314168377], "region_confidence": {"north_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Alberta/RV0055/2017", "num_date": 2016.9281314168377, "lbi": 0.176462742538702, "ep": 9, "region_entropy": -0.0, "ne": 8, "passage": "undetermined", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1004163", "division": "alberta", "avg_age": 36.1517094017094, "authors": "public_health_agency_of_canada__phac_", "date": "2016-12-05", "gender": "male", "region": "north_america", "raw_date": "2016-12-05", "country": "canada", "div": 0.020041645165263647, "age": 79, "clade_membership": "A1a"}}, {"xvalue": 0.02181, "tvalue": 5.84009, "clade": 406, "strain": "A/Saskatchewan/RV1171/2017", "muts": ["C522A", "C1047T", "T1446C"], "aa_muts": {"SigPep": [], "HA1": ["N158K"], "HA2": []}, "yvalue": 41.0, "attr": {"num_date_confidence": [2017.1396303901438, 2017.1396303901438], "region_confidence": {"north_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Saskatchewan/RV1171/2017", "num_date": 2017.1396303901438, "lbi": 0.13556141499545166, "ep": 10, "region_entropy": -0.0, "ne": 8, "passage": "undetermined", "glyc": 11, "num_gender": 1, "rb": 3, "isolate_id": "EPI1005634", "division": "saskatchewan", "avg_age": 36.1517094017094, "authors": "public_health_agency_of_canada__phac_", "date": "2017-02-21", "gender": "female", "region": "north_america", "raw_date": "2017-02-21", "country": "canada", "div": 0.021810270621304143, "age": 66, "clade_membership": "A1a"}}], "yvalue": 41.5, "attr": {"num_date": 2016.8083878036862, "num_date_confidence": [2016.6104376267085, 2016.9281314168377], "region_confidence": {"north_america": 0.9999819144116594}, "region": "north_america", "age_score": 0.11964039887546708, "region_entropy": 9.40279637482328e-05, "ne": 8, "glyc": 12, "num_gender": 0.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.23804715791340225, "div": 0.020041645112359337, "age": 72.5, "ep": 9, "clade_membership": "A1a"}}, {"xvalue": 0.01827, "tvalue": 4.74085, "clade": 407, "strain": "NODE_0000059", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01886, "tvalue": 4.84358, "clade": 408, "strain": "NODE_0000060", "muts": ["A468G"], "aa_muts": {"SigPep": [], "HA1": ["I140M"], "HA2": []}, "children": [{"xvalue": 0.0224, "tvalue": 5.26172, "clade": 409, "strain": "A/Stockholm/32/2016", "muts": ["T15A", "G62A", "A315G", "A992G", "A1011G", "G1080A"], "aa_muts": {"SigPep": [], "HA1": ["G5E", "K315R"], "HA2": []}, "yvalue": 40.0, "attr": {"num_date_confidence": [2016.561259411362, 2016.561259411362], "region_confidence": {"europe": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Stockholm/32/2016", "num_date": 2016.561259411362, "lbi": 0.2268366712514549, "ep": 8, "region_entropy": -0.0, "ne": 10, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI836441", "division": "stockholm", "avg_age": 36.1517094017094, "authors": "swedish_institute_for_infectious_disease_control", "date": "2016-07-24", "gender": "male", "region": "europe", "raw_date": "2016-07-24", "country": "sweden", "div": 0.022404485393578852, "age": 18, "clade_membership": "A1a"}}, {"xvalue": 0.02063, "tvalue": 5.14947, "clade": 410, "strain": "A/Norway/3806/2016", "muts": ["A231G", "C527A", "T629C"], "aa_muts": {"SigPep": [], "HA1": ["T160K", "L194P"], "HA2": []}, "yvalue": 39.0, "attr": {"num_date_confidence": [2016.4490075290896, 2016.4490075290896], "region_confidence": {"europe": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Norway/3806/2016", "num_date": 2016.4490075290896, "lbi": 0.30032341809568824, "ep": 9, "region_entropy": -0.0, "ne": 7, "passage": "egg", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI910596", "division": "norway", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2016-06-13", "gender": "male", "region": "europe", "raw_date": "2016-06-13", "country": "norway", "div": 0.020630665969541488, "age": 19, "clade_membership": "A1a"}}, {"xvalue": 0.02063, "tvalue": 5.48751, "clade": 411, "strain": "NODE_0000062", "muts": ["T486C", "A831G", "T1680C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.0224, "tvalue": 5.95508, "clade": 412, "strain": "A/Stockholm/25/2017", "muts": ["A451G", "A702G", "T1425C"], "aa_muts": {"SigPep": [], "HA1": ["T135A"], "HA2": []}, "yvalue": 38.0, "attr": {"num_date_confidence": [2017.2546201232033, 2017.2546201232033], "region_confidence": {"europe": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Stockholm/25/2017", "num_date": 2017.2546201232033, "lbi": 0.1276344604451857, "ep": 9, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 11, "num_gender": 0, "rb": 2, "isolate_id": "EPI990090", "division": "stockholm", "avg_age": 36.1517094017094, "authors": "public_health_agency_of_sweden", "date": "2017-04-04", "gender": "?", "region": "europe", "raw_date": "2017-04-04", "country": "sweden", "div": 0.022397622715056253, "age": "unknown", "clade_membership": "A1a"}}, {"xvalue": 0.02063, "tvalue": 5.50539, "clade": 413, "strain": "A/Uppsala/9/2016", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 37.0, "attr": {"num_date_confidence": [2016.8049281314168, 2016.8049281314168], "region_confidence": {"europe": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Uppsala/9/2016", "num_date": 2016.8049281314168, "lbi": 0.24727581293735904, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI867302", "division": "uppsala", "avg_age": 36.1517094017094, "authors": "swedish_institute_for_infectious_disease_control", "date": "2016-10-21", "gender": "female", "region": "europe", "raw_date": "2016-10-21", "country": "sweden", "div": 0.020630246154319066, "age": 70, "clade_membership": "A1a"}}, {"xvalue": 0.02122, "tvalue": 5.60669, "clade": 414, "strain": "A/Albania/6990/2016", "muts": ["A1206G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 36.0, "attr": {"num_date_confidence": [2016.9062286105407, 2016.9062286105407], "region_confidence": {"europe": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Albania/6990/2016", "num_date": 2016.9062286105407, "lbi": 0.19195350234168268, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI887365", "division": "albania", "avg_age": 36.1517094017094, "authors": "crick_worldwide_influenza_centre", "date": "2016-11-27", "gender": "female", "region": "europe", "raw_date": "2016-11-27", "country": "albania", "div": 0.021218985417040325, "age": 45, "clade_membership": "A1a"}}], "yvalue": 37.0, "attr": {"num_date": 2016.7870492838103, "num_date_confidence": [2016.6567185103308, 2016.8049281314168], "region_confidence": {"europe": 1.0}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 1.7175387575701072e-15, "ne": 8, "glyc": 12, "num_gender": 0.6666666666666666, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.2585790588724604, "div": 0.020630246101414756, "age": 57.5, "ep": 8, "clade_membership": "A1a"}}], "yvalue": 38.66667, "attr": {"num_date": 2016.1431133004205, "num_date_confidence": [2016.027636245051, 2016.2612633164026], "region_confidence": {"europe": 0.9999999997806718}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 2.2154961923636622e-09, "ne": 8, "glyc": 12, "num_gender": 0.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.6452226983463112, "div": 0.018862278635073074, "age": 38.0, "ep": 8, "clade_membership": "A1a"}}, {"xvalue": 0.01886, "tvalue": 4.91458, "clade": 415, "strain": "NODE_0000064", "muts": ["C452A"], "aa_muts": {"SigPep": [], "HA1": ["T135K"], "HA2": []}, "children": [{"xvalue": 0.02182, "tvalue": 5.53277, "clade": 416, "strain": "A/Alaska/29/2016", "muts": ["C37A", "A249T", "C597T", "T804A", "G859A"], "aa_muts": {"SigPep": ["L13M"], "HA1": ["D271N"], "HA2": []}, "yvalue": 35.0, "attr": {"num_date_confidence": [2016.8323066392882, 2016.8323066392882], "region_confidence": {"north_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Alaska/29/2016", "num_date": 2016.8323066392882, "lbi": 0.13749080119145318, "ep": 8, "region_entropy": -0.0, "ne": 10, "passage": "unpassaged", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI865286", "division": "alaska", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2016-10-31", "gender": "male", "region": "north_america", "raw_date": "2016-10-31", "country": "usa", "div": 0.021816349660762936, "age": 63, "clade_membership": "A1a"}}, {"xvalue": 0.01945, "tvalue": 5.20976, "clade": 417, "strain": "NODE_0000065", "muts": ["T255C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02122, "tvalue": 5.48958, "clade": 418, "strain": "NODE_0000071", "muts": ["C99T", "C637A", "G837A"], "aa_muts": {"SigPep": [], "HA1": ["Q197K"], "HA2": []}, "children": [{"xvalue": 0.02299, "tvalue": 6.14673, "clade": 419, "strain": "A/Tucuman/A186/2017", "muts": ["A133C", "T183C", "T187G"], "aa_muts": {"SigPep": [], "HA1": ["I29L", "S47A"], "HA2": []}, "yvalue": 34.0, "attr": {"num_date_confidence": [2017.4462696783025, 2017.4462696783025], "region_confidence": {"south_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Tucuman/A186/2017", "num_date": 2017.4462696783025, "lbi": 0.15231984392576672, "ep": 10, "region_entropy": -0.0, "ne": 9, "passage": "unpassaged", "glyc": 10, "num_gender": -1, "rb": 2, "isolate_id": "EPI1059711", "division": "tucuman", "avg_age": 36.1517094017094, "authors": "instituto_nacional_enfermedades_infecciosas_c.g.malbran", "date": "2017-06-13", "gender": "male", "region": "south_america", "raw_date": "2017-06-13", "country": "argentina", "div": 0.022989675086413603, "age": 16, "clade_membership": "A1a"}}, {"xvalue": 0.02713, "tvalue": 6.31374, "clade": 420, "strain": "A/Canberra/49/2017", "muts": ["A26G", "C90T", "T441C", "T492C", "G603A", "A638G", "G1404A", "T1431C", "G1545A", "C1677T"], "aa_muts": {"SigPep": ["Y9C"], "HA1": ["K197R"], "HA2": []}, "yvalue": 33.0, "attr": {"num_date_confidence": [2017.6132785763175, 2017.6132785763175], "region_confidence": {"oceania": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Canberra/49/2017", "num_date": 2017.6132785763175, "lbi": 0.13346695262599673, "ep": 9, "region_entropy": -0.0, "ne": 9, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1060467", "division": "canberra", "avg_age": 36.1517094017094, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2017-08-13", "gender": "female", "region": "oceania", "raw_date": "2017-08-13", "country": "australia", "div": 0.027132060189714004, "age": "unknown", "clade_membership": "A1a"}}], "yvalue": 33.5, "attr": {"num_date": 2016.7891183540967, "num_date_confidence": [2016.6391118392419, 2017.0591767379365], "region_confidence": {"europe": 0.5663970202168033, "south_america": 0.24104510938891663, "oceania": 0.19215270311255814}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 0.4281398705842769, "ne": 8, "glyc": 11, "num_gender": 0.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.45270680389633056, "div": 0.021220268836972547, "age": 16.0, "ep": 9, "clade_membership": "A1a"}}, {"xvalue": 0.02122, "tvalue": 5.60549, "clade": 421, "strain": "NODE_0000066", "muts": ["C256T", "C369T", "A924G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02181, "tvalue": 6.03722, "clade": 422, "strain": "A/Norway/2629/2017", "muts": ["A52C"], "aa_muts": {"SigPep": [], "HA1": ["K2Q"], "HA2": []}, "yvalue": 32.0, "attr": {"num_date_confidence": [2017.3367556468172, 2017.3367556468172], "region_confidence": {"europe": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Norway/2629/2017", "num_date": 2017.3367556468172, "lbi": 0.18471136654704837, "ep": 8, "region_entropy": -0.0, "ne": 9, "passage": "cell", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1043056", "division": "norway", "avg_age": 36.1517094017094, "authors": "crick_worldwide_influenza_centre", "date": "2017-05-04", "gender": "male", "region": "europe", "raw_date": "2017-05-04", "country": "norway", "div": 0.021809029298230507, "age": 69, "clade_membership": "A1a"}}, {"xvalue": 0.0224, "tvalue": 5.76135, "clade": 423, "strain": "NODE_0000067", "muts": ["T1362C", "A1410G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02476, "tvalue": 6.28363, "clade": 424, "strain": "A/Thailand/46/2017", "muts": ["G174A", "T640C", "C1371T", "A1687G"], "aa_muts": {"SigPep": [], "HA1": ["S198P"], "HA2": ["N218D"]}, "yvalue": 31.0, "attr": {"num_date_confidence": [2017.583162217659, 2017.583162217659], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Thailand/46/2017", "num_date": 2017.583162217659, "lbi": 0.14876813427020388, "ep": 9, "region_entropy": -0.0, "ne": 9, "passage": "unpassaged", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1058577", "division": "thailand", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-08-02", "gender": "female", "region": "southeast_asia", "raw_date": "2017-08-02", "country": "thailand", "div": 0.024756814387241987, "age": 20, "clade_membership": "A1a"}}, {"xvalue": 0.02358, "tvalue": 5.97699, "clade": 425, "strain": "A/StPetersburg/274/2017", "muts": ["A243G", "T936C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 30.0, "attr": {"num_date_confidence": [2017.2765229295003, 2017.2765229295003], "region_confidence": {"west_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/StPetersburg/274/2017", "num_date": 2017.2765229295003, "lbi": 0.2236334719678455, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1043076", "division": "st_petersburg", "avg_age": 36.1517094017094, "authors": "crick_worldwide_influenza_centre", "date": "2017-04-12", "gender": "female", "region": "west_asia", "raw_date": "2017-04-12", "country": "russia", "div": 0.023576547367387634, "age": 78, "clade_membership": "A1a"}}], "yvalue": 30.5, "attr": {"num_date": 2017.060884065122, "num_date_confidence": [2016.9217127897257, 2017.207477850667], "region_confidence": {"europe": 0.49461976623447884, "west_asia": 0.3576023491355999, "southeast_asia": 0.14758119520837665}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 0.43445504477752217, "ne": 8, "glyc": 11, "num_gender": 1.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.3537745232740702, "div": 0.022398344739726943, "age": 49.0, "ep": 8, "clade_membership": "A1a"}}], "yvalue": 31.25, "attr": {"num_date": 2016.905029955857, "num_date_confidence": [2016.6946119100464, 2017.059207641018], "region_confidence": {"europe": 0.9997959434564241}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 0.0008972880941573137, "ne": 8, "glyc": 11, "num_gender": 0.3333333333333333, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.4158864940661333, "div": 0.021219883571189164, "age": 55.666666666666664, "ep": 8, "clade_membership": "A1a"}}, {"xvalue": 0.01945, "tvalue": 5.38164, "clade": 426, "strain": "NODE_0000349", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02122, "tvalue": 5.69156, "clade": 427, "strain": "A/Iceland/81/2016", "muts": ["G35A", "G180A", "C365T"], "aa_muts": {"SigPep": ["C12Y"], "HA1": ["A106V"], "HA2": []}, "yvalue": 29.0, "attr": {"num_date_confidence": [2016.991101984942, 2016.991101984942], "region_confidence": {"europe": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Iceland/81/2016", "num_date": 2016.991101984942, "lbi": 0.21077213578413623, "ep": 8, "region_entropy": -0.0, "ne": 10, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI913751", "division": "iceland", "avg_age": 36.1517094017094, "authors": "crick_worldwide_influenza_centre", "date": "2016-12-28", "gender": "female", "region": "europe", "raw_date": "2016-12-28", "country": "iceland", "div": 0.021220033672522353, "age": "unknown", "clade_membership": "A1a"}}, {"xvalue": 0.02004, "tvalue": 5.75612, "clade": 428, "strain": "NODE_0000069", "muts": ["T184A"], "aa_muts": {"SigPep": [], "HA1": ["S46T"], "HA2": []}, "children": [{"xvalue": 0.02063, "tvalue": 5.89759, "clade": 429, "strain": "A/Dijon/1176/2017", "muts": ["T60C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 28.0, "attr": {"num_date_confidence": [2017.1971252566734, 2017.1971252566734], "region_confidence": {"europe": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Dijon/1176/2017", "num_date": 2017.1971252566734, "lbi": 0.20088576948317588, "ep": 9, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1054471", "division": "bourgogne_franche_comte", "avg_age": 36.1517094017094, "authors": "crick_worldwide_influenza_centre", "date": "2017-03-14", "gender": "female", "region": "europe", "raw_date": "2017-03-14", "country": "france", "div": 0.020629644636105653, "age": 3, "clade_membership": "A1a"}}, {"xvalue": 0.02063, "tvalue": 5.94961, "clade": 430, "strain": "A/Ontario/RV1644/2017", "muts": ["C527A"], "aa_muts": {"SigPep": [], "HA1": ["T160K"], "HA2": []}, "yvalue": 27.0, "attr": {"num_date_confidence": [2017.2491444216291, 2017.2491444216291], "region_confidence": {"north_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Ontario/RV1644/2017", "num_date": 2017.2491444216291, "lbi": 0.18327276530085268, "ep": 9, "region_entropy": -0.0, "ne": 7, "passage": "undetermined", "glyc": 10, "num_gender": 1, "rb": 2, "isolate_id": "EPI1005435", "division": "ontario", "avg_age": 36.1517094017094, "authors": "public_health_agency_of_canada__phac_", "date": "2017-04-02", "gender": "female", "region": "north_america", "raw_date": "2017-04-02", "country": "canada", "div": 0.020629784096780845, "age": 0.9166666666666666, "clade_membership": "A1a"}}], "yvalue": 27.5, "attr": {"num_date": 2017.0556586028447, "num_date_confidence": [2016.790223213502, 2017.1489922369642], "region_confidence": {"europe": 0.9998994942468038}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 0.0004457078750416352, "ne": 8, "glyc": 11, "num_gender": 1.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.27353710830373257, "div": 0.02004073183163002, "age": 1.9583333333333333, "ep": 9, "clade_membership": "A1a"}}], "yvalue": 28.25, "attr": {"num_date": 2016.681178158429, "num_date_confidence": [2016.4742780626395, 2016.8271094410336], "region_confidence": {"europe": 0.9999991883474961}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 5.298875767527137e-06, "ne": 8, "glyc": 11, "num_gender": 1.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.4574132233674238, "div": 0.019451439505943195, "age": 1.9583333333333333, "ep": 8, "clade_membership": "A1a"}}], "yvalue": 31.0, "attr": {"num_date": 2016.509297587755, "num_date_confidence": [2016.341403209158, 2016.6995134903113], "region_confidence": {"europe": 0.999997188779964}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 1.8261295963744344e-05, "ne": 8, "glyc": 11, "num_gender": 0.5, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.607106871765711, "div": 0.019451439453038885, "age": 31.152777777777775, "ep": 8, "clade_membership": "A1a"}}], "yvalue": 33.0, "attr": {"num_date": 2016.2141193893071, "num_date_confidence": [2016.0640160106775, 2016.4615636466401], "region_confidence": {"europe": 0.9979084384704657}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 0.006521502357612733, "ne": 8, "glyc": 11, "num_gender": 0.3333333333333333, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.6448547769278805, "div": 0.018862415487201162, "age": 35.70238095238095, "ep": 8, "clade_membership": "A1a"}}], "yvalue": 35.83333, "attr": {"num_date": 2016.0403888739518, "num_date_confidence": [2015.9317733889818, 2016.1661392137203], "region_confidence": {"europe": 0.9979373366931383}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 0.006448243493921873, "ne": 8, "glyc": 12, "num_gender": 0.21428571428571427, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.7790654835504629, "div": 0.018273281333696576, "age": 36.53787878787878, "ep": 7, "clade_membership": "A1a"}}], "yvalue": 38.66667, "attr": {"num_date": 2016.011749056833, "num_date_confidence": [2015.8868662888015, 2016.1207857765583], "region_confidence": {"europe": 0.9921862421782649}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 0.023186988091142034, "ne": 8, "clade_annotation": "A1a", "glyc": 12, "num_gender": 0.1875, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.7973214873717831, "div": 0.018273281280792267, "age": 42.07051282051282, "ep": 7, "clade_membership": "A1a"}}], "yvalue": 40.83333, "attr": {"num_date": 2015.8927266344936, "num_date_confidence": [2015.7893466828396, 2015.9971298067821], "region_confidence": {"europe": 0.9732840078948647, "west_asia": 0.020335352860723594}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 0.061616222305850316, "ne": 8, "glyc": 12, "num_gender": 0.17647058823529413, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.8508638891573471, "div": 0.017684286504262164, "age": 42.07051282051282, "ep": 7, "clade_membership": "A1"}}, {"xvalue": 0.01768, "tvalue": 4.56727, "clade": 431, "strain": "NODE_0000072", "muts": ["G1197A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.01827, "tvalue": 5.24803, "clade": 432, "strain": "A/Hatay/4990/2016", "muts": ["A472G"], "aa_muts": {"SigPep": [], "HA1": ["R142G"], "HA2": []}, "yvalue": 26.0, "attr": {"num_date_confidence": [2016.5475701574264, 2016.5475701574264], "region_confidence": {"west_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Hatay/4990/2016", "num_date": 2016.5475701574264, "lbi": 0.1564474567058062, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1013097", "division": "hatay", "avg_age": 36.1517094017094, "authors": "crick_worldwide_influenza_centre", "date": "2016-07-19", "gender": "male", "region": "west_asia", "raw_date": "2016-07-19", "country": "turkey", "div": 0.018273213599543335, "age": 25, "clade_membership": "A1"}}, {"xvalue": 0.01768, "tvalue": 4.5864, "clade": 433, "strain": "NODE_0000073", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02004, "tvalue": 4.9277, "clade": 434, "strain": "A/Singapore/INFTT-16-0411/2016", "muts": ["A5G", "A413G", "G1089A", "C1470T"], "aa_muts": {"SigPep": ["K2R"], "HA1": ["N122S"], "HA2": []}, "yvalue": 25.0, "attr": {"num_date_confidence": [2016.2272416153319, 2016.2272416153319], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Singapore/INFTT-16-0411/2016", "num_date": 2016.2272416153319, "lbi": 0.3582468261201788, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 11, "num_gender": 0, "rb": 2, "isolate_id": "EPI780768", "division": "singapore", "avg_age": 36.1517094017094, "authors": "ministry_of_health,_singapore", "date": "2016-03-24", "gender": "?", "region": "southeast_asia", "raw_date": "2016-03-24", "country": "singapore", "div": 0.020042837770758534, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01827, "tvalue": 4.63133, "clade": 435, "strain": "NODE_0000075", "muts": ["C1476T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02063, "tvalue": 4.92223, "clade": 436, "strain": "A/Ireland/13744/2016", "muts": ["G21T", "C114T", "C135T", "C452A"], "aa_muts": {"SigPep": ["L7F"], "HA1": ["T135K"], "HA2": []}, "yvalue": 24.0, "attr": {"num_date_confidence": [2016.2217659137577, 2016.2217659137577], "region_confidence": {"europe": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Ireland/13744/2016", "num_date": 2016.2217659137577, "lbi": 0.36318467854154407, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "undetermined", "glyc": 11, "num_gender": 0, "rb": 2, "isolate_id": "EPI733298", "division": "ireland", "avg_age": 36.1517094017094, "authors": "national_virus_reference_laboratory", "date": "2016-03-22", "gender": "?", "region": "europe", "raw_date": "2016-03-22", "country": "ireland", "div": 0.020633871695316355, "age": "unknown", "clade_membership": "A1"}}, {"xvalue": 0.01827, "tvalue": 4.63133, "clade": 437, "strain": "A/Tottori/37/2015", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 23.0, "attr": {"num_date_confidence": [2015.930869267625, 2015.930869267625], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Tottori/37/2015", "num_date": 2015.930869267625, "lbi": 0.7515615258273673, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI726896", "division": "tottori", "avg_age": 36.1517094017094, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2015-12-07", "gender": "male", "region": "japan_korea", "raw_date": "2015-12-07", "country": "japan", "div": 0.018273281386600886, "age": 2, "clade_membership": "A1"}}], "yvalue": 23.5, "attr": {"num_date": 2015.930869267625, "num_date_confidence": [2015.8807591450122, 2015.930869267625], "region_confidence": {"japan_korea": 0.9966085438398486}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 0.009852096304696403, "ne": 7, "glyc": 12, "num_gender": -0.5, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.7515615258273673, "div": 0.018273281333696576, "age": 2.0, "ep": 7, "clade_membership": "A1"}}, {"xvalue": 0.02063, "tvalue": 5.20011, "clade": 438, "strain": "NODE_0000076", "muts": ["A264G", "T279C", "A323G", "T538C", "T981A"], "aa_muts": {"SigPep": [], "HA1": ["K92R", "H311Q"], "HA2": []}, "children": [{"xvalue": 0.02299, "tvalue": 5.862, "clade": 439, "strain": "A/Texas/68/2017", "muts": ["C527T", "G579A", "T626C", "A1397G"], "aa_muts": {"SigPep": [], "HA1": ["T160I", "F193S"], "HA2": ["K121R"]}, "yvalue": 22.0, "attr": {"num_date_confidence": [2017.1615331964408, 2017.1615331964408], "region_confidence": {"north_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Texas/68/2017", "num_date": 2017.1615331964408, "lbi": 0.25626812507037733, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 11, "num_gender": 0, "rb": 3, "isolate_id": "EPI972987", "division": "texas", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-03-01", "gender": "?", "region": "north_america", "raw_date": "2017-03-01", "country": "usa", "div": 0.02299181400571997, "age": 9, "clade_membership": "A1b"}}, {"xvalue": 0.02181, "tvalue": 5.40534, "clade": 440, "strain": "NODE_0000082", "muts": ["A220G", "T594C"], "aa_muts": {"SigPep": [], "HA1": ["I58V"], "HA2": []}, "children": [{"xvalue": 0.02476, "tvalue": 6.28636, "clade": 441, "strain": "A/Colombia/5238/2017", "muts": ["A638G", "G882A", "A1197C", "C1203T", "A1257G"], "aa_muts": {"SigPep": [], "HA1": ["Q197R"], "HA2": []}, "yvalue": 21.0, "attr": {"num_date_confidence": [2017.5859000684463, 2017.5859000684463], "region_confidence": {"south_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Colombia/5238/2017", "num_date": 2017.5859000684463, "lbi": 0.1582621904995269, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1058317", "division": "colombia", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-08-03", "gender": "male", "region": "south_america", "raw_date": "2017-08-03", "country": "colombia", "div": 0.02475966795995442, "age": 37, "clade_membership": "A1b"}}, {"xvalue": 0.02535, "tvalue": 5.96056, "clade": 442, "strain": "A/Canberra/5/2017", "muts": ["T210C", "A324G", "C393T", "T689C", "C1101T", "A1236G"], "aa_muts": {"SigPep": [], "HA1": ["I214T"], "HA2": []}, "yvalue": 20.0, "attr": {"num_date_confidence": [2017.2600958247776, 2017.2600958247776], "region_confidence": {"oceania": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Canberra/5/2017", "num_date": 2017.2600958247776, "lbi": 0.23559538355049858, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1022454", "division": "canberra", "avg_age": 36.1517094017094, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2017-04-06", "gender": "female", "region": "oceania", "raw_date": "2017-04-06", "country": "australia", "div": 0.025349722085114084, "age": "unknown", "clade_membership": "A1b"}}], "yvalue": 20.5, "attr": {"num_date": 2016.7048821152018, "num_date_confidence": [2016.5408293574608, 2016.9152391548469], "region_confidence": {"japan_korea": 0.6239419653928066, "oceania": 0.23052504398174423, "south_america": 0.14520670719307704}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 0.39782602033057635, "ne": 8, "glyc": 12, "num_gender": 0.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.7194120473767207, "div": 0.02181211296293426, "age": 37.0, "ep": 7, "clade_membership": "A1b"}}, {"xvalue": 0.02122, "tvalue": 5.32403, "clade": 443, "strain": "NODE_0000084", "muts": ["G205A"], "aa_muts": {"SigPep": [], "HA1": ["D53N"], "HA2": []}, "children": [{"xvalue": 0.0224, "tvalue": 5.44242, "clade": 444, "strain": "A/Okinawa/23/2016", "muts": ["C1189T", "T1296C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 19.0, "attr": {"num_date_confidence": [2016.7419575633128, 2016.7419575633128], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Okinawa/23/2016", "num_date": 2016.7419575633128, "lbi": 0.5456490851471296, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI860542", "division": "okinawa", "avg_age": 36.1517094017094, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-09-28", "gender": "female", "region": "japan_korea", "raw_date": "2016-09-28", "country": "japan", "div": 0.022401052836292002, "age": 75, "clade_membership": "A1b"}}, {"xvalue": 0.02181, "tvalue": 5.62586, "clade": 445, "strain": "A/Kanagawa/AC1609/2016", "muts": ["T499C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 18.0, "attr": {"num_date_confidence": [2016.9253935660506, 2016.9253935660506], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Kanagawa/AC1609/2016", "num_date": 2016.9253935660506, "lbi": 0.3449453715235212, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI867768", "division": "kanagawa", "avg_age": 36.1517094017094, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2016-12-04", "gender": "?", "region": "japan_korea", "raw_date": "2016-12-04", "country": "japan", "div": 0.02181184421027162, "age": "unknown", "clade_membership": "A1b"}}], "yvalue": 18.5, "attr": {"num_date": 2016.623566895918, "num_date_confidence": [2016.4951727943521, 2016.7017945997522], "region_confidence": {"japan_korea": 0.9999999999164635}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 9.158605220654634e-10, "ne": 7, "glyc": 12, "num_gender": 0.5, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.7335917950768642, "div": 0.021223160335661274, "age": 75.0, "ep": 8, "clade_membership": "A1b"}}, {"xvalue": 0.02063, "tvalue": 5.24909, "clade": 446, "strain": "NODE_0000350", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02122, "tvalue": 5.36576, "clade": 447, "strain": "A/Bahrain/786/2016", "muts": ["T1649C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["F205S"]}, "yvalue": 17.0, "attr": {"num_date_confidence": [2016.6652977412732, 2016.6652977412732], "region_confidence": {"west_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Bahrain/786/2016", "num_date": 2016.6652977412732, "lbi": 0.7000407464865454, "ep": 7, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI955679", "division": "bahrain", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2016-08-31", "gender": "male", "region": "west_asia", "raw_date": "2016-08-31", "country": "bahrain", "div": 0.021223098656050886, "age": 56, "clade_membership": "A1b"}}, {"xvalue": 0.02063, "tvalue": 5.37707, "clade": 448, "strain": "NODE_0000351", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02181, "tvalue": 5.75606, "clade": 449, "strain": "NODE_0000086", "muts": ["C321T", "C1308T"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02476, "tvalue": 6.19054, "clade": 450, "strain": "A/Victoria/2052/2017", "muts": ["C420T", "G471A", "C873T", "C942T", "G1557A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 16.0, "attr": {"num_date_confidence": [2017.4900752908966, 2017.4900752908966], "region_confidence": {"oceania": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Victoria/2052/2017", "num_date": 2017.4900752908966, "lbi": 0.19789356086035484, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1058745", "division": "victoria", "avg_age": 36.1517094017094, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2017-06-29", "gender": "male", "region": "oceania", "raw_date": "2017-06-29", "country": "australia", "div": 0.02476173257342153, "age": "unknown", "clade_membership": "A1b"}}, {"xvalue": 0.02181, "tvalue": 6.05365, "clade": 451, "strain": "A/SouthAustralia/89/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 15.0, "attr": {"num_date_confidence": [2017.35318275154, 2017.35318275154], "region_confidence": {"oceania": 1.0}, "age_score": 0.11964039887546708, "strain": "A/SouthAustralia/89/2017", "num_date": 2017.35318275154, "lbi": 0.244546021237939, "ep": 7, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1031506", "division": "south_australia", "avg_age": 36.1517094017094, "authors": "who_collaborating_centre_for_reference_and_research_on_influenza", "date": "2017-05-10", "gender": "male", "region": "oceania", "raw_date": "2017-05-10", "country": "australia", "div": 0.0218123891450742, "age": 76, "clade_membership": "A1b"}}], "yvalue": 15.5, "attr": {"num_date": 2017.0555958309646, "num_date_confidence": [2016.8401852425995, 2017.2469867695809], "region_confidence": {"oceania": 0.9998757534249975}, "region": "oceania", "age_score": 0.11964039887546708, "region_entropy": 0.0005400632946548008, "ne": 7, "glyc": 12, "num_gender": -1.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.45690870581592247, "div": 0.02181238909216989, "age": 76.0, "ep": 7, "clade_membership": "A1b"}}, {"xvalue": 0.02063, "tvalue": 5.48368, "clade": 452, "strain": "NODE_0000352", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02299, "tvalue": 6.18506, "clade": 453, "strain": "A/Guatemala/46/2017", "muts": ["C207A", "G219A", "G273T", "T729C"], "aa_muts": {"SigPep": [], "HA1": ["D53E", "Q75H"], "HA2": []}, "yvalue": 14.0, "attr": {"num_date_confidence": [2017.4845995893224, 2017.4845995893224], "region_confidence": {"north_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Guatemala/46/2017", "num_date": 2017.4845995893224, "lbi": 0.19277654822593127, "ep": 9, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1049153", "division": "guatemala", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-06-27", "gender": "female", "region": "north_america", "raw_date": "2017-06-27", "country": "guatemala", "div": 0.022993262038209023, "age": 32, "clade_membership": "A1b"}}, {"xvalue": 0.02063, "tvalue": 5.61217, "clade": 454, "strain": "NODE_0000353", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02181, "tvalue": 5.89759, "clade": 455, "strain": "A/Paraiba/147746-IEC/2017", "muts": ["G87T", "G281A"], "aa_muts": {"SigPep": [], "HA1": ["G78D"], "HA2": []}, "yvalue": 13.0, "attr": {"num_date_confidence": [2017.1971252566734, 2017.1971252566734], "region_confidence": {"south_america": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Paraiba/147746-IEC/2017", "num_date": 2017.1971252566734, "lbi": 0.3156145362177917, "ep": 8, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1048606", "division": "paraiba", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-03-14", "gender": "female", "region": "south_america", "raw_date": "2017-03-14", "country": "brazil", "div": 0.021812819393469057, "age": 79, "clade_membership": "A1b"}}, {"xvalue": 0.02299, "tvalue": 6.24256, "clade": 456, "strain": "A/Yokohama/142/2017", "muts": ["A81G", "C452A", "A453T", "A1450G"], "aa_muts": {"SigPep": [], "HA1": ["T135N"], "HA2": ["K139E"]}, "yvalue": 12.0, "attr": {"num_date_confidence": [2017.542094455852, 2017.542094455852], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Yokohama/142/2017", "num_date": 2017.542094455852, "lbi": 0.18492445429103033, "ep": 8, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 2, "isolate_id": "EPI1057872", "division": "kanagawa", "avg_age": 36.1517094017094, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2017-07-18", "gender": "male", "region": "japan_korea", "raw_date": "2017-07-18", "country": "japan", "div": 0.022993377939989044, "age": 44, "clade_membership": "A1b"}}], "yvalue": 12.5, "attr": {"num_date": 2016.9117090760565, "num_date_confidence": [2016.7405499829001, 2017.0838389892458], "region_confidence": {"japan_korea": 0.9989831368664928}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 0.003958100844470867, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.5913682420164802, "div": 0.02063447356366503, "age": 61.5, "ep": 7, "clade_membership": "A1b"}}], "yvalue": 13.25, "attr": {"num_date": 2016.7832158119543, "num_date_confidence": [2016.6340155934754, 2016.9837584188106], "region_confidence": {"japan_korea": 0.9990085498012989}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 0.003988885991870132, "ne": 7, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.7202488359058177, "div": 0.020634473510760722, "age": 51.666666666666664, "ep": 7, "clade_membership": "A1b"}}], "yvalue": 14.375, "attr": {"num_date": 2016.6766027914575, "num_date_confidence": [2016.520555361248, 2016.8402322915804], "region_confidence": {"japan_korea": 0.9991119655001367}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 0.0036063742725368146, "ne": 7, "glyc": 12, "num_gender": -0.2, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.8232280890868072, "div": 0.020634473457856413, "age": 57.75, "ep": 7, "clade_membership": "A1b"}}], "yvalue": 15.6875, "attr": {"num_date": 2016.54862684873, "num_date_confidence": [2016.45340979534, 2016.6465235855537], "region_confidence": {"japan_korea": 0.9994539446811087}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 0.002214824238073358, "ne": 7, "glyc": 12, "num_gender": -0.3333333333333333, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.9371241529804879, "div": 0.020634473404952103, "age": 57.4, "ep": 7, "clade_membership": "A1b"}}, {"xvalue": 0.02181, "tvalue": 5.33138, "clade": 457, "strain": "NODE_0000087", "muts": ["A233G", "A472G"], "aa_muts": {"SigPep": [], "HA1": ["E62G", "R142G"], "HA2": []}, "children": [{"xvalue": 0.0224, "tvalue": 5.66678, "clade": 458, "strain": "NODE_0000088", "muts": ["C452A"], "aa_muts": {"SigPep": [], "HA1": ["T135K"], "HA2": []}, "children": [{"xvalue": 0.02476, "tvalue": 6.19601, "clade": 459, "strain": "A/Bangladesh/2062/2017", "muts": ["G21A", "T729C", "G1185A", "T1618A"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["C195S"]}, "yvalue": 11.0, "attr": {"num_date_confidence": [2017.495550992471, 2017.495550992471], "region_confidence": {"south_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Bangladesh/2062/2017", "num_date": 2017.495550992471, "lbi": 0.2162500663999172, "ep": 10, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1055981", "division": "bangladesh", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-07-01", "gender": "male", "region": "south_asia", "raw_date": "2017-07-01", "country": "bangladesh", "div": 0.024759064513566607, "age": 2, "clade_membership": "A1b/135K"}}, {"xvalue": 0.02476, "tvalue": 6.09745, "clade": 460, "strain": "A/Singapore/MOH0129/2017", "muts": ["A140G", "G281A", "G1545T", "C1662A"], "aa_muts": {"SigPep": [], "HA1": ["N31S", "G78D"], "HA2": []}, "yvalue": 10.0, "attr": {"num_date_confidence": [2017.3969883641341, 2017.3969883641341], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Singapore/MOH0129/2017", "num_date": 2017.3969883641341, "lbi": 0.25138539812236965, "ep": 11, "region_entropy": -0.0, "ne": 8, "passage": "unpassaged", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1023800", "division": "singapore", "avg_age": 36.1517094017094, "authors": "ministry_of_health,_singapore", "date": "2017-05-26", "gender": "female", "region": "southeast_asia", "raw_date": "2017-05-26", "country": "singapore", "div": 0.024759212946905314, "age": 52, "clade_membership": "A1b/135K"}}, {"xvalue": 0.0224, "tvalue": 6.14126, "clade": 461, "strain": "A/Bangladesh/3389/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 9.0, "attr": {"num_date_confidence": [2017.4407939767282, 2017.4407939767282], "region_confidence": {"south_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Bangladesh/3389/2017", "num_date": 2017.4407939767282, "lbi": 0.2345598781420206, "ep": 10, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 11, "num_gender": -1, "rb": 2, "isolate_id": "EPI1056068", "division": "bangladesh", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-06-11", "gender": "male", "region": "south_asia", "raw_date": "2017-06-11", "country": "bangladesh", "div": 0.022400766452797833, "age": 2, "clade_membership": "A1b/135K"}}], "yvalue": 10.0, "attr": {"num_date": 2016.9663139828713, "num_date_confidence": [2016.7635381047646, 2017.137678806978], "region_confidence": {"south_asia": 0.9995150807000779}, "region": "south_asia", "age_score": 0.11964039887546708, "region_entropy": 0.001963073168122818, "ne": 7, "clade_annotation": "A1b/135K", "glyc": 11, "num_gender": -0.3333333333333333, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.610823672770607, "div": 0.022400766399893524, "age": 18.666666666666668, "ep": 10, "clade_membership": "A1b/135K"}}, {"xvalue": 0.0224, "tvalue": 5.47424, "clade": 462, "strain": "NODE_0000090", "muts": ["T1173C"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02299, "tvalue": 5.52963, "clade": 463, "strain": "NODE_0000096", "muts": ["A412T"], "aa_muts": {"SigPep": [], "HA1": ["N122Y"], "HA2": []}, "children": [{"xvalue": 0.02535, "tvalue": 6.20697, "clade": 464, "strain": "A/NewZealand/719/2017", "muts": ["A474G", "T623A", "G813A", "T1287C"], "aa_muts": {"SigPep": [], "HA1": ["I192N"], "HA2": []}, "yvalue": 8.0, "attr": {"num_date_confidence": [2017.5065023956195, 2017.5065023956195], "region_confidence": {"oceania": 1.0}, "age_score": 0.11964039887546708, "strain": "A/NewZealand/719/2017", "num_date": 2017.5065023956195, "lbi": 0.21302174097174723, "ep": 11, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 11, "num_gender": 1, "rb": 2, "isolate_id": "EPI1048315", "division": "new_zealand", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-07-05", "gender": "female", "region": "oceania", "raw_date": "2017-07-05", "country": "new_zealand", "div": 0.025347270267418256, "age": 50, "clade_membership": "A1b"}}, {"xvalue": 0.02653, "tvalue": 5.84557, "clade": 465, "strain": "A/Kanagawa/ZC1617/2017", "muts": ["T162C", "C516A", "C527A", "G605T", "A772G", "A1463G"], "aa_muts": {"SigPep": [], "HA1": ["H156Q", "T160K", "G186V", "I242V"], "HA2": ["K143R"]}, "yvalue": 7.0, "attr": {"num_date_confidence": [2017.145106091718, 2017.145106091718], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Kanagawa/ZC1617/2017", "num_date": 2017.145106091718, "lbi": 0.39183882008441073, "ep": 13, "region_entropy": -0.0, "ne": 7, "passage": "egg", "glyc": 10, "num_gender": 1, "rb": 3, "isolate_id": "EPI1065016", "division": "kanagawa", "avg_age": 36.1517094017094, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2017-02-23", "gender": "female", "region": "japan_korea", "raw_date": "2017-02-23", "country": "japan", "div": 0.026529555258000586, "age": 2, "clade_membership": "A1b"}}], "yvalue": 7.5, "attr": {"num_date": 2016.8291720584803, "num_date_confidence": [2016.7025101706765, 2016.95129738503], "region_confidence": {"japan_korea": 0.9999902568255828}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 5.334933094540905e-05, "ne": 7, "glyc": 11, "num_gender": 1.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.7978421268707898, "div": 0.02298944444993421, "age": 26.0, "ep": 10, "clade_membership": "A1b"}}, {"xvalue": 0.0224, "tvalue": 5.48834, "clade": 466, "strain": "NODE_0000354", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02417, "tvalue": 6.03174, "clade": 467, "strain": "A/Miyazaki/89/2017", "muts": ["T29C", "T626C", "A736G"], "aa_muts": {"SigPep": ["I10T"], "HA1": ["F193S", "I230V"], "HA2": []}, "yvalue": 6.0, "attr": {"num_date_confidence": [2017.331279945243, 2017.331279945243], "region_confidence": {"japan_korea": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Miyazaki/89/2017", "num_date": 2017.331279945243, "lbi": 0.27736490698769345, "ep": 11, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": -1, "rb": 3, "isolate_id": "EPI1057808", "division": "miyazaki", "avg_age": 36.1517094017094, "authors": "national_institute_of_infectious_diseases__niid_", "date": "2017-05-02", "gender": "male", "region": "japan_korea", "raw_date": "2017-05-02", "country": "japan", "div": 0.024167097912436042, "age": 6, "clade_membership": "A1b"}}, {"xvalue": 0.0224, "tvalue": 5.60902, "clade": 468, "strain": "NODE_0000355", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02299, "tvalue": 5.75573, "clade": 469, "strain": "NODE_0000091", "muts": ["A148G"], "aa_muts": {"SigPep": [], "HA1": ["I34V"], "HA2": []}, "children": [{"xvalue": 0.02476, "tvalue": 6.09471, "clade": 470, "strain": "A/SouthAfrica/3533/2017", "muts": ["G264A", "C627T", "A1571G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["K179R"]}, "yvalue": 5.0, "attr": {"num_date_confidence": [2017.394250513347, 2017.394250513347], "region_confidence": {"africa": 1.0}, "age_score": 0.11964039887546708, "strain": "A/SouthAfrica/3533/2017", "num_date": 2017.394250513347, "lbi": 0.2891008697987855, "ep": 9, "region_entropy": -0.0, "ne": 9, "passage": "undetermined", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI1066184", "division": "south_africa", "avg_age": 36.1517094017094, "authors": "national_institute_of_communicable_diseases", "date": "2017-05-25", "gender": "?", "region": "africa", "raw_date": "2017-05-25", "country": "south_africa", "div": 0.024755758431472184, "age": "unknown", "clade_membership": "A1b"}}, {"xvalue": 0.02358, "tvalue": 6.25625, "clade": 471, "strain": "A/SouthAfrica/R07339/2017", "muts": ["A1687G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": ["N218D"]}, "yvalue": 4.0, "attr": {"num_date_confidence": [2017.5557837097879, 2017.5557837097879], "region_confidence": {"africa": 1.0}, "age_score": 0.11964039887546708, "strain": "A/SouthAfrica/R07339/2017", "num_date": 2017.5557837097879, "lbi": 0.22206490205975676, "ep": 9, "region_entropy": -0.0, "ne": 9, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1049432", "division": "south_africa", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-07-23", "gender": "female", "region": "africa", "raw_date": "2017-07-23", "country": "south_africa", "div": 0.023577450289915126, "age": "unknown", "clade_membership": "A1b"}}], "yvalue": 4.5, "attr": {"num_date": 2017.0552649048077, "num_date_confidence": [2016.9198444110787, 2017.2370225311595], "region_confidence": {"africa": 0.9996871590420923}, "region": "africa", "age_score": 0.11964039887546708, "region_entropy": 0.001361751557150763, "ne": 8, "glyc": 12, "num_gender": 0.5, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.5988108150227098, "div": 0.02298906821679032, "age": "unknown", "ep": 9, "clade_membership": "A1b"}}, {"xvalue": 0.0224, "tvalue": 5.67741, "clade": 472, "strain": "NODE_0000356", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02358, "tvalue": 5.97151, "clade": 473, "strain": "A/Singapore/GP0573/2017", "muts": ["G180A", "A753G"], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 3.0, "attr": {"num_date_confidence": [2017.2710472279261, 2017.2710472279261], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Singapore/GP0573/2017", "num_date": 2017.2710472279261, "lbi": 0.35007776219891046, "ep": 9, "region_entropy": -0.0, "ne": 7, "passage": "unpassaged", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1023844", "division": "singapore", "avg_age": 36.1517094017094, "authors": "ministry_of_health,_singapore", "date": "2017-04-10", "gender": "female", "region": "southeast_asia", "raw_date": "2017-04-10", "country": "singapore", "div": 0.023578014976918905, "age": 47, "clade_membership": "A1b"}}, {"xvalue": 0.0224, "tvalue": 5.78807, "clade": 474, "strain": "NODE_0000357", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "children": [{"xvalue": 0.02358, "tvalue": 6.17411, "clade": 475, "strain": "A/Ayutthaya/98/2017", "muts": ["G61A", "C321A"], "aa_muts": {"SigPep": [], "HA1": ["G5R", "S91R"], "HA2": []}, "yvalue": 2.0, "attr": {"num_date_confidence": [2017.473648186174, 2017.473648186174], "region_confidence": {"southeast_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Ayutthaya/98/2017", "num_date": 2017.473648186174, "lbi": 0.24503531633898093, "ep": 10, "region_entropy": -0.0, "ne": 8, "passage": "cell", "glyc": 12, "num_gender": 1, "rb": 2, "isolate_id": "EPI1058165", "division": "ayutthaya", "avg_age": 36.1517094017094, "authors": "centers_for_disease_control_and_prevention", "date": "2017-06-23", "gender": "female", "region": "southeast_asia", "raw_date": "2017-06-23", "country": "thailand", "div": 0.023578288366869916, "age": 57, "clade_membership": "A1b"}}, {"xvalue": 0.0224, "tvalue": 5.78807, "clade": 476, "strain": "A/Jordan/20170020103/2017", "muts": [], "aa_muts": {"SigPep": [], "HA1": [], "HA2": []}, "yvalue": 1.0, "attr": {"num_date_confidence": [2017.0876112251883, 2017.0876112251883], "region_confidence": {"west_asia": 1.0}, "age_score": 0.11964039887546708, "strain": "A/Jordan/20170020103/2017", "num_date": 2017.0876112251883, "lbi": 0.5430920562043418, "ep": 9, "region_entropy": -0.0, "ne": 7, "passage": "cell", "glyc": 12, "num_gender": 0, "rb": 2, "isolate_id": "EPI1036087", "division": "jordan", "avg_age": 36.1517094017094, "authors": "crick_worldwide_influenza_centre", "date": "2017-02-02", "gender": "?", "region": "west_asia", "raw_date": "2017-02-02", "country": "jordan", "div": 0.022400627436240446, "age": "unknown", "clade_membership": "A1b"}}], "yvalue": 1.5, "attr": {"num_date": 2017.0876112251883, "num_date_confidence": [2016.958533589952, 2017.0876112251883], "region_confidence": {"southeast_asia": 0.6638184053164712, "west_asia": 0.33597763664047925}, "region": "southeast_asia", "age_score": 0.11964039887546708, "region_entropy": 0.2780902935097324, "ne": 7, "glyc": 12, "num_gender": 0.5, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.5430920562043418, "div": 0.022400627383336136, "age": 57.0, "ep": 9, "clade_membership": "A1b"}}], "yvalue": 2.25, "attr": {"num_date": 2016.9769437622758, "num_date_confidence": [2016.8509050930084, 2017.0683218464853], "region_confidence": {"japan_korea": 0.06908746961489033, "southeast_asia": 0.7212492048010956, "west_asia": 0.1528207329941664, "africa": 0.05680557961521735}, "region": "southeast_asia", "age_score": 0.11964039887546708, "region_entropy": 0.3781630306652045, "ne": 7, "glyc": 12, "num_gender": 0.6666666666666666, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.6739906652293691, "div": 0.022400627330431827, "age": 52.0, "ep": 9, "clade_membership": "A1b"}}], "yvalue": 3.375, "attr": {"num_date": 2016.9085573646926, "num_date_confidence": [2016.7629520197695, 2017.0093653052081], "region_confidence": {"japan_korea": 0.3127508930794121, "southeast_asia": 0.35482660895911383, "west_asia": 0.07519029713209871, "africa": 0.2571497321091629}, "region": "southeast_asia", "age_score": 0.11964039887546708, "region_entropy": 0.5541165063943744, "ne": 7, "glyc": 12, "num_gender": 0.6, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.754612775744137, "div": 0.022400627277527518, "age": 52.0, "ep": 9, "clade_membership": "A1b"}}], "yvalue": 4.6875, "attr": {"num_date": 2016.7878790713946, "num_date_confidence": [2016.685338363433, 2016.9377430504424], "region_confidence": {"japan_korea": 0.9999837772022775}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 9.193505886443577e-05, "ne": 7, "glyc": 12, "num_gender": 0.3333333333333333, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.865301244665435, "div": 0.02240062722462321, "age": 36.666666666666664, "ep": 9, "clade_membership": "A1b"}}], "yvalue": 6.09375, "attr": {"num_date": 2016.7737813466929, "num_date_confidence": [2016.616864806835, 2016.8458469310458], "region_confidence": {"japan_korea": 0.9999996567210374}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 2.505247242771353e-06, "ne": 7, "glyc": 12, "num_gender": 0.5, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.8767565561405282, "div": 0.0224006271717189, "age": 32.4, "ep": 9, "clade_membership": "A1b"}}], "yvalue": 8.04688, "attr": {"num_date": 2016.6309184492588, "num_date_confidence": [2016.5117329516056, 2016.7640566946222], "region_confidence": {"japan_korea": 0.9999790120292815}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 0.00010866807886540753, "ne": 7, "glyc": 12, "num_gender": 0.2727272727272727, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.9478180329715264, "div": 0.021812118815095143, "age": 27.25, "ep": 9, "clade_membership": "A1b"}}], "yvalue": 16.94687, "attr": {"num_date": 2016.4996458788912, "num_date_confidence": [2016.360880919634, 2016.5566132064266], "region_confidence": {"japan_korea": 0.9999992224718302}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 5.409595808812872e-06, "ne": 7, "clade_annotation": "A1b", "glyc": 12, "num_gender": 0.09090909090909091, "avg_age": 36.1517094017094, "rb": 2, "lbi": 1.0, "div": 0.020634473352047794, "age": 39.125, "ep": 7, "clade_membership": "A1b"}}], "yvalue": 21.81563, "attr": {"num_date": 2015.8859344569394, "num_date_confidence": [2015.8201359504988, 2015.915041905187], "region_confidence": {"japan_korea": 0.99612536950646}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 0.01162740396406136, "ne": 7, "glyc": 12, "num_gender": 0.04, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.8409145951335928, "div": 0.017684286557166473, "age": 36.94117647058823, "ep": 7, "clade_membership": "A1"}}], "yvalue": 23.90781, "attr": {"num_date": 2015.8668085214567, "num_date_confidence": [2015.7894779851802, 2015.9011111422544], "region_confidence": {"japan_korea": 0.7636267845507289, "europe": 0.17450849989774242, "west_asia": 0.06136673051030795}, "region": "japan_korea", "age_score": 0.11964039887546708, "region_entropy": 0.2978881143743343, "ne": 7, "glyc": 12, "num_gender": 0.0, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.858017335330881, "div": 0.017684286504262164, "age": 36.27777777777778, "ep": 7, "clade_membership": "A1"}}], "yvalue": 37.88247, "attr": {"num_date": 2015.7814865508979, "num_date_confidence": [2015.7278154732985, 2015.8555901808954], "region_confidence": {"europe": 0.9590191704966251, "west_asia": 0.03996936744206081}, "region": "europe", "age_score": 0.11964039887546708, "region_entropy": 0.07670408961818996, "ne": 7, "glyc": 12, "num_gender": 0.13725490196078433, "avg_age": 36.1517094017094, "rb": 2, "lbi": 0.9532970285096477, "div": 0.01709535932798098, "age": 36.1517094017094, "ep": 7, "clade_membership": "A1"}}], "yvalue": 57.57906, "attr": {"num_date": 2015.757959202558, "num_date_confidence": [2015.7041060157544, 2015.8338263379064], "region_confidence": {"europe": 0.9590529762765992, "west_asia": 0.03999530920322818}, "region": "europe", "age_score": 0.07001463870520458, "region_entropy": 0.07648556868986127, "ne": 7, "glyc": 12, "num_gender": 0.125, "avg_age": 33.64409722222222, "rb": 2, "lbi": 0.940437615114336, "div": 0.01709535927507667, "age": 33.64409722222222, "ep": 7, "clade_membership": "A1"}}], "yvalue": 61.91453, "attr": {"num_date": 2015.7045918752478, "num_date_confidence": [2015.6122366244856, 2015.78883241106], "region_confidence": {"europe": 0.9589799403976345, "west_asia": 0.0400146599356999}, "region": "europe", "age_score": 0.04174982170526464, "region_entropy": 0.0768427450949116, "ne": 7, "glyc": 12, "num_gender": 0.11940298507462686, "avg_age": 33.89833333333333, "rb": 2, "lbi": 0.9207234958030058, "div": 0.0165063837285892, "age": 33.89833333333333, "ep": 6, "clade_membership": "A1"}}], "yvalue": 94.74933, "attr": {"num_date": 2015.6309048705893, "num_date_confidence": [2015.528486919878, 2015.6814681699536], "region_confidence": {"china": 0.999999402726339}, "region": "china", "age_score": 0.5759270438954873, "region_entropy": 3.994898346346847e-06, "ne": 7, "clade_annotation": "A1", "glyc": 12, "num_gender": 0.07692307692307693, "avg_age": 31.362554112554115, "rb": 2, "lbi": 0.9146150029691297, "div": 0.015917544450147234, "age": 31.362554112554115, "ep": 6, "clade_membership": "A1"}}], "yvalue": 121.81721, "attr": {"num_date": 2015.10064675061, "num_date_confidence": [2014.9204669673793, 2015.2261835861793], "region_confidence": {"china": 0.9999998624582244}, "region": "china", "age_score": 1.5757791914885841, "region_entropy": 1.0632881977436667e-06, "ne": 5, "glyc": 12, "num_gender": 0.007462686567164179, "avg_age": 29.26842948717949, "rb": 2, "lbi": 0.5161837101672183, "div": 0.012967699561194281, "age": 29.26842948717949, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 144.0185, "attr": {"num_date": 2014.9222179839608, "num_date_confidence": [2014.608872321829, 2014.9700867825827], "region_confidence": {"china": 0.0372000106246725, "north_america": 0.9627614007715539}, "region": "north_america", "age_score": 1.4227413234801665, "region_entropy": 0.06922143197743838, "ne": 5, "glyc": 12, "num_gender": 0.0625, "avg_age": 30.660618279569896, "rb": 2, "lbi": 0.4191317068463464, "div": 0.011789555995262047, "age": 30.660618279569896, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 152.50925, "attr": {"num_date": 2014.6251637335895, "num_date_confidence": [2014.329266251525, 2014.7221793395129], "region_confidence": {"north_america": 0.9965842137684855}, "region": "north_america", "age_score": 1.6040252168088562, "region_entropy": 0.010700552737926472, "ne": 5, "glyc": 12, "num_gender": 0.055900621118012424, "avg_age": 30.471333333333337, "rb": 2, "lbi": 0.3507868983155642, "div": 0.011200807706179339, "age": 30.471333333333337, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 177.58718, "attr": {"num_date": 2014.2873642416355, "num_date_confidence": [2014.1897946540212, 2014.50464620102], "region_confidence": {"oceania": 0.031776150524432625, "north_america": 0.9664314261176324}, "region": "north_america", "age_score": 0.2151289603545686, "region_entropy": 0.06685192118176096, "ne": 5, "glyc": 12, "num_gender": 0.09090909090909091, "avg_age": 32.49074074074074, "rb": 2, "lbi": 0.37952695806665443, "div": 0.010612068095513585, "age": 32.49074074074074, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 208.52906, "attr": {"num_date": 2014.2083781717884, "num_date_confidence": [2014.1265465106255, 2014.3332682843507], "region_confidence": {"oceania": 0.03177170876264711, "north_america": 0.9664261610641801}, "region": "north_america", "age_score": 0.6561092327639302, "region_entropy": 0.06687167883444028, "ne": 5, "glyc": 12, "num_gender": 0.08849557522123894, "avg_age": 32.16337099811676, "rb": 2, "lbi": 0.3632014452697233, "div": 0.010612068042609276, "age": 32.16337099811676, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 217.76453, "attr": {"num_date": 2014.1713546447584, "num_date_confidence": [2013.9363298414219, 2014.2821741078806], "region_confidence": {"oceania": 0.031769773925639885, "north_america": 0.9664231236603744}, "region": "north_america", "age_score": 0.5647645663390012, "region_entropy": 0.06688727243852971, "ne": 5, "glyc": 12, "num_gender": 0.09251101321585903, "avg_age": 32.40402621722846, "rb": 2, "lbi": 0.3577884503526396, "div": 0.010023328544534606, "age": 32.40402621722846, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 224.94476, "attr": {"num_date": 2013.9209565811204, "num_date_confidence": [2013.709307945478, 2014.1806170258117], "region_confidence": {"japan_korea": 0.036840415264883665, "oceania": 0.12729512584710287, "china": 0.15844786331134003, "north_america": 0.662668187127088}, "region": "north_america", "age_score": 1.765670027384973, "region_entropy": 0.439766488036484, "ne": 5, "glyc": 12, "num_gender": 0.08547008547008547, "avg_age": 31.928506375227684, "rb": 2, "lbi": 0.3558235462972735, "div": 0.009434540135428018, "age": 31.928506375227684, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 229.97238, "attr": {"num_date": 2013.6434169855056, "num_date_confidence": [2013.524631432597, 2013.879656122607], "region_confidence": {"japan_korea": 0.01996795699529549, "oceania": 0.22949142817191337, "china": 0.3419898074616628, "north_america": 0.40033878002455364}, "region": "north_america", "age_score": 1.6358656620887428, "region_entropy": 0.5171570837037668, "ne": 4, "clade_annotation": "3c2.A", "glyc": 11, "num_gender": 0.08936170212765958, "avg_age": 32.11367753623188, "rb": 2, "lbi": 0.27867999066201676, "div": 0.008845751903680095, "age": 32.11367753623188, "ep": 5, "clade_membership": "3c2.A"}}], "yvalue": 232.98619, "attr": {"num_date": 2012.7291800717455, "num_date_confidence": [2012.5041537698166, 2013.0481224605908], "region_confidence": {"oceania": 0.9084222648210457, "north_america": 0.091194126644861}, "region": "oceania", "age_score": 1.6358656620887428, "region_entropy": 0.13423806484992895, "ne": 2, "glyc": 12, "num_gender": 0.0847457627118644, "avg_age": 32.11367753623188, "rb": 1, "lbi": 0.2238381160053671, "div": 0.0053021871115491205, "age": 32.11367753623188, "ep": 2, "clade_membership": "3c"}}], "yvalue": 246.38567, "attr": {"num_date": 2012.079483209337, "num_date_confidence": [2011.7177427976287, 2012.1832962340095], "region_confidence": {"oceania": 0.9083115886916313, "north_america": 0.09119901423385686}, "region": "oceania", "age_score": 0, "region_entropy": 0.13461318365893987, "ne": 1, "glyc": 12, "num_gender": 0.07604562737642585, "avg_age": 32.88136288998358, "rb": 1, "lbi": 0.286090587055312, "div": 0.002944349102933845, "age": 32.88136288998358, "ep": 2, "clade_membership": "3c"}}], "yvalue": 255.19284, "attr": {"num_date": 2011.635483150785, "num_date_confidence": [2011.4490585031433, 2011.8754933013881], "region_confidence": {"oceania": 0.9085649768447679, "north_america": 0.09136250522769576}, "region": "oceania", "age_score": 0, "region_entropy": 0.13311460677217424, "ne": 1, "glyc": 12, "num_gender": 0.07196969696969698, "avg_age": 33.03880718954248, "rb": 1, "lbi": 0.18944275558101695, "div": 0.0017666048437834508, "age": 33.03880718954248, "ep": 2, "clade_membership": "3c"}}], "yvalue": 262.06428, "attr": {"num_date": 2011.3883038592626, "num_date_confidence": [2011.2988588344663, 2011.6522026044868], "region_confidence": {"oceania": 0.793243340753188, "north_america": 0.2067564258751503}, "region": "oceania", "age_score": 0, "region_entropy": 0.22133015885385923, "ne": 1, "glyc": 12, "num_gender": 0.06390977443609022, "avg_age": 33.21910569105691, "rb": 0, "lbi": 0.13732199117396127, "div": 0.0011779354578137565, "age": 33.21910569105691, "ep": 1, "clade_membership": "3c"}}], "yvalue": 264.53214, "xvalue": 0.0}augur-24.2.2/tests/data/json_tree_to_nexus/000077500000000000000000000000001456376326500207345ustar00rootroot00000000000000augur-24.2.2/tests/data/json_tree_to_nexus/flu_h3n2_ha_3y_frequencies.json000066400000000000000000002370671456376326500267420ustar00rootroot00000000000000{ "japan_korea_clade:578": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:579": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:576": [ 0.051335, 0.039066, 0.035231, 0.035279, 0.027178, 0.027662, 0.028429, 0.029166, 0.029714, 0.030325, 0.031027, 0.031945, 0.032976, 0.033924, 0.034844, 0.035812, 0.036731, 0.033409, 0.033859, 0.03435, 0.034717, 0.035005, 0.035343, 0.035665, 0.035595, 0.035535, 0.036003, 0.036242, 0.036462, 0.036832, 0.036998, 0.036786, 0.036622, 0.036532, 0.036466, 0.036464, 0.036462 ], "japan_korea_clade:577": [ 0.154004, 0.117198, 0.105692, 0.105837, 0.081535, 0.082985, 0.085288, 0.087499, 0.089143, 0.090975, 0.09308, 0.095834, 0.098927, 0.101772, 0.104533, 0.107437, 0.110192, 0.100227, 0.101576, 0.103051, 0.10415, 0.105016, 0.106028, 0.106994, 0.106786, 0.106605, 0.108008, 0.108726, 0.109387, 0.110497, 0.110993, 0.110357, 0.109866, 0.109597, 0.109399, 0.109392, 0.109387 ], "japan_korea_clade:574": [ 0.051335, 0.039066, 0.035231, 0.035279, 0.027178, 0.027662, 0.028429, 0.029166, 0.029714, 0.030325, 0.031027, 0.031945, 0.032976, 0.033924, 0.034844, 0.035812, 0.036731, 0.033409, 0.033859, 0.03435, 0.034717, 0.035005, 0.035343, 0.035665, 0.035595, 0.035535, 0.036003, 0.036242, 0.036462, 0.036832, 0.036998, 0.036786, 0.036622, 0.036532, 0.036466, 0.036464, 0.036462 ], "japan_korea_clade:575": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:572": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:573": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:570": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:571": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:464": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:465": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:466": [ 0.124405, 0.124534, 0.105285, 0.106403, 0.10723, 0.10902, 0.11027, 0.112131, 0.114745, 0.117376, 0.11905, 0.120138, 0.121391, 0.121992, 0.107162, 0.106271, 0.105335, 0.105032, 0.10553, 0.106027, 0.10483, 0.10243, 0.100495, 0.099191, 0.098492, 0.098184, 0.09881, 0.098698, 0.09763, 0.096585, 0.096047, 0.096004, 0.097056, 0.097624, 0.099313, 0.101002, 0.100999 ], "china_clade:467": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:460": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:461": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:462": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:463": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:468": [ 0.124405, 0.124534, 0.105285, 0.106403, 0.10723, 0.10902, 0.11027, 0.112131, 0.114745, 0.117376, 0.11905, 0.120138, 0.121391, 0.121992, 0.107162, 0.106271, 0.105335, 0.105032, 0.10553, 0.106027, 0.10483, 0.10243, 0.100495, 0.099191, 0.098492, 0.098184, 0.09881, 0.098698, 0.09763, 0.096585, 0.096047, 0.096004, 0.097056, 0.097624, 0.099313, 0.101002, 0.100999 ], "china_clade:469": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:48": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:49": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:407": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:406": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:405": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:404": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:403": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:402": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:401": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:400": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:409": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:408": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:318": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:319": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:312": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:313": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:310": [ 0.0, 0.034352, 0.030979, 0.031022, 0.031455, 0.032015, 0.032903, 0.033838, 0.035016, 0.035618, 0.035787, 0.036218, 0.036422, 0.036027, 0.035656, 0.035737, 0.035837, 0.032554, 0.033069, 0.033723, 0.033965, 0.033865, 0.033087, 0.032051, 0.031327, 0.030666, 0.030468, 0.030402, 0.030354, 0.030552, 0.030892, 0.031509, 0.031742, 0.031373, 0.031317, 0.031315, 0.031313 ], "japan_korea_clade:311": [ 0.0, 0.034352, 0.030979, 0.031022, 0.031455, 0.032015, 0.032903, 0.033838, 0.035016, 0.035618, 0.035787, 0.036218, 0.036422, 0.036027, 0.035656, 0.035737, 0.035837, 0.032554, 0.033069, 0.033723, 0.033965, 0.033865, 0.033087, 0.032051, 0.031327, 0.030666, 0.030468, 0.030402, 0.030354, 0.030552, 0.030892, 0.031509, 0.031742, 0.031373, 0.031317, 0.031315, 0.031313 ], "japan_korea_clade:316": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:317": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:314": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:315": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:600": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:601": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:602": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:603": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:604": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:605": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:606": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:607": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "global_clade:202": [ 0.003874, 0.003888, 0.003987, 0.004108, 0.004328, 0.004683, 0.004854, 0.004509, 0.004238, 0.003937, 0.00365, 0.003434, 0.003272, 0.003131, 0.003055, 0.002918, 0.00273, 0.002557, 0.002418, 0.002257, 0.002102, 0.002002, 0.001832, 0.001615, 0.001385, 0.001165, 0.001012, 0.00092, 0.000895, 0.000925, 0.000911, 0.000898, 0.000851, 0.000834, 0.000838, 0.000838, 0.000838 ], "north_america_clade:46": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "southeast_asia_clade:559": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:47": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:445": [ 0.023584, 0.023619, 0.023856, 0.0244, 0.02511, 0.025853, 0.026853, 0.028179, 0.029558, 0.031134, 0.031795, 0.032164, 0.032004, 0.031531, 0.031004, 0.030931, 0.030987, 0.031331, 0.031954, 0.032688, 0.033182, 0.033678, 0.034297, 0.034525, 0.034568, 0.034342, 0.034449, 0.034548, 0.033989, 0.033265, 0.032699, 0.03229, 0.032127, 0.032125, 0.032124, 0.032123, 0.032123 ], "north_america_clade:44": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:45": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:42": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "southeast_asia_clade:555": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:43": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:562": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:563": [ 0.107519, 0.107492, 0.107783, 0.108816, 0.11091, 0.112718, 0.114411, 0.116297, 0.117531, 0.118353, 0.118554, 0.118943, 0.119475, 0.118906, 0.104683, 0.10366, 0.080736, 0.081487, 0.082761, 0.085089, 0.087963, 0.090787, 0.093518, 0.096049, 0.098553, 0.101004, 0.10249, 0.10377, 0.104824, 0.107004, 0.108947, 0.110086, 0.111084, 0.1114, 0.111396, 0.111394, 0.11139 ], "oceania_clade:560": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:561": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:566": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:567": [ 0.03584, 0.035831, 0.035928, 0.036272, 0.03697, 0.037573, 0.038137, 0.038766, 0.039177, 0.039451, 0.039518, 0.039648, 0.039825, 0.039635, 0.034894, 0.034553, 0.026912, 0.027162, 0.027587, 0.028363, 0.029321, 0.030262, 0.031173, 0.032016, 0.032851, 0.033668, 0.034163, 0.03459, 0.034941, 0.035668, 0.036316, 0.036695, 0.037028, 0.037133, 0.037132, 0.037131, 0.03713 ], "oceania_clade:564": [ 0.03584, 0.035831, 0.035928, 0.036272, 0.03697, 0.037573, 0.038137, 0.038766, 0.039177, 0.039451, 0.039518, 0.039648, 0.039825, 0.039635, 0.034894, 0.034553, 0.026912, 0.027162, 0.027587, 0.028363, 0.029321, 0.030262, 0.031173, 0.032016, 0.032851, 0.033668, 0.034163, 0.03459, 0.034941, 0.035668, 0.036316, 0.036695, 0.037028, 0.037133, 0.037132, 0.037131, 0.03713 ], "oceania_clade:565": [ 0.071679, 0.071662, 0.071856, 0.072544, 0.07394, 0.075146, 0.076274, 0.077532, 0.078354, 0.078902, 0.079036, 0.079295, 0.07965, 0.079271, 0.069788, 0.069107, 0.053824, 0.054325, 0.055174, 0.056726, 0.058642, 0.060525, 0.062345, 0.064033, 0.065702, 0.067336, 0.068327, 0.06918, 0.069883, 0.071336, 0.072631, 0.073391, 0.074056, 0.074267, 0.074264, 0.074263, 0.07426 ], "oceania_clade:568": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:569": [ 0.03584, 0.035831, 0.035928, 0.036272, 0.03697, 0.037573, 0.038137, 0.038766, 0.039177, 0.039451, 0.039518, 0.039648, 0.039825, 0.039635, 0.034894, 0.034553, 0.026912, 0.027162, 0.027587, 0.028363, 0.029321, 0.030262, 0.031173, 0.032016, 0.032851, 0.033668, 0.034163, 0.03459, 0.034941, 0.035668, 0.036316, 0.036695, 0.037028, 0.037133, 0.037132, 0.037131, 0.03713 ], "europe_clade:129": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:128": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:125": [ 0.024969, 0.025001, 0.025368, 0.025964, 0.026731, 0.027594, 0.028492, 0.029651, 0.031026, 0.03275, 0.0346, 0.03622, 0.035285, 0.034101, 0.032962, 0.031875, 0.030846, 0.029968, 0.029177, 0.028452, 0.0278, 0.02739, 0.027226, 0.027252, 0.027458, 0.027806, 0.028395, 0.029147, 0.030077, 0.031223, 0.032598, 0.032324, 0.031827, 0.031468, 0.031395, 0.031394, 0.031394 ], "europe_clade:124": [ 0.074906, 0.075003, 0.076105, 0.077892, 0.080192, 0.082783, 0.085476, 0.088953, 0.093077, 0.098249, 0.103799, 0.108661, 0.105854, 0.102304, 0.098886, 0.095624, 0.092538, 0.089904, 0.087532, 0.085357, 0.083399, 0.08217, 0.081677, 0.081755, 0.082375, 0.083419, 0.085185, 0.08744, 0.090231, 0.093668, 0.097794, 0.096972, 0.09548, 0.094403, 0.094185, 0.094181, 0.094181 ], "europe_clade:127": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:126": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:121": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:120": [ 0.480617, 0.481243, 0.488313, 0.499781, 0.514538, 0.527491, 0.536426, 0.54925, 0.565535, 0.587515, 0.610974, 0.637042, 0.658193, 0.683906, 0.713117, 0.742388, 0.768346, 0.790686, 0.810698, 0.828913, 0.845474, 0.859408, 0.871033, 0.881014, 0.889612, 0.897216, 0.903484, 0.908824, 0.913492, 0.917357, 0.92048, 0.922537, 0.923777, 0.924657, 0.924802, 0.92477, 0.924756 ], "europe_clade:123": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:122": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:309": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:308": [ 0.188673, 0.188949, 0.190848, 0.195199, 0.200879, 0.206825, 0.214823, 0.225428, 0.236463, 0.249075, 0.254364, 0.257315, 0.25603, 0.252251, 0.248032, 0.247445, 0.247892, 0.250648, 0.255629, 0.261502, 0.265456, 0.269424, 0.274372, 0.276204, 0.276544, 0.274736, 0.275595, 0.276383, 0.271915, 0.266118, 0.261589, 0.258322, 0.257013, 0.256996, 0.25699, 0.256983, 0.25698 ], "west_asia_clade:164": [ 0.0, 0.025597, 0.025597, 0.025597, 0.025597, 0.025695, 0.02589, 0.026308, 0.026821, 0.027465, 0.028475, 0.029757, 0.031205, 0.03257, 0.033817, 0.035288, 0.037044, 0.038876, 0.041092, 0.043264, 0.044859, 0.045979, 0.046863, 0.047044, 0.046531, 0.04548, 0.044518, 0.043767, 0.04301, 0.042339, 0.041955, 0.042088, 0.041759, 0.041476, 0.041473, 0.04147, 0.041469 ], "west_asia_clade:165": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "west_asia_clade:162": [ 0.0, 0.025597, 0.025597, 0.025597, 0.025597, 0.025695, 0.02589, 0.026308, 0.026821, 0.027465, 0.028475, 0.029757, 0.031205, 0.03257, 0.033817, 0.035288, 0.037044, 0.038876, 0.041092, 0.043264, 0.044859, 0.045979, 0.046863, 0.047044, 0.046531, 0.04548, 0.044518, 0.043767, 0.04301, 0.042339, 0.041955, 0.042088, 0.041759, 0.041476, 0.041473, 0.04147, 0.041469 ], "west_asia_clade:163": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "west_asia_clade:160": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "west_asia_clade:161": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:301": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:300": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:303": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:302": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:305": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:304": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:307": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "africa_clade:306": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:12": [ 0.207753, 0.207503, 0.204675, 0.200088, 0.194185, 0.189004, 0.185429, 0.1803, 0.173786, 0.164994, 0.15561, 0.145183, 0.136723, 0.126438, 0.114753, 0.103045, 0.092661, 0.083726, 0.075721, 0.068435, 0.061811, 0.056237, 0.051587, 0.047595, 0.044155, 0.041113, 0.038606, 0.036434, 0.034567, 0.03302, 0.031766, 0.030924, 0.030408, 0.030034, 0.02996, 0.029961, 0.029962 ], "europe_clade:13": [ 0.051938, 0.051876, 0.051169, 0.050022, 0.048546, 0.047251, 0.046357, 0.045075, 0.043447, 0.041249, 0.038903, 0.036296, 0.034181, 0.031609, 0.028688, 0.025761, 0.023165, 0.020931, 0.01893, 0.017109, 0.015453, 0.014059, 0.012897, 0.011899, 0.011039, 0.010278, 0.009652, 0.009108, 0.008642, 0.008255, 0.007941, 0.007731, 0.007602, 0.007508, 0.00749, 0.00749, 0.00749 ], "europe_clade:10": [ 0.207753, 0.207503, 0.204675, 0.200088, 0.194185, 0.189004, 0.185429, 0.1803, 0.173786, 0.164994, 0.15561, 0.145183, 0.136723, 0.126438, 0.114753, 0.103045, 0.092661, 0.083726, 0.075721, 0.068435, 0.061811, 0.056237, 0.051587, 0.047595, 0.044155, 0.041113, 0.038606, 0.036434, 0.034567, 0.03302, 0.031766, 0.030924, 0.030408, 0.030034, 0.02996, 0.029961, 0.029962 ], "europe_clade:11": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:16": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:17": [ 0.051938, 0.051876, 0.051169, 0.050022, 0.048546, 0.047251, 0.046357, 0.045075, 0.043447, 0.041249, 0.038903, 0.036296, 0.034181, 0.031609, 0.028688, 0.025761, 0.023165, 0.020931, 0.01893, 0.017109, 0.015453, 0.014059, 0.012897, 0.011899, 0.011039, 0.010278, 0.009652, 0.009108, 0.008642, 0.008255, 0.007941, 0.007731, 0.007602, 0.007508, 0.00749, 0.00749, 0.00749 ], "europe_clade:14": [ 0.155815, 0.155627, 0.153506, 0.150066, 0.145639, 0.141753, 0.139072, 0.135225, 0.13034, 0.123746, 0.116708, 0.108887, 0.102542, 0.094828, 0.086065, 0.077284, 0.069496, 0.062794, 0.056791, 0.051326, 0.046358, 0.042178, 0.03869, 0.035696, 0.033117, 0.030835, 0.028955, 0.027325, 0.025925, 0.024765, 0.023824, 0.023193, 0.022806, 0.022525, 0.02247, 0.022471, 0.022471 ], "europe_clade:15": [ 0.051938, 0.051876, 0.051169, 0.050022, 0.048546, 0.047251, 0.046357, 0.045075, 0.043447, 0.041249, 0.038903, 0.036296, 0.034181, 0.031609, 0.028688, 0.025761, 0.023165, 0.020931, 0.01893, 0.017109, 0.015453, 0.014059, 0.012897, 0.011899, 0.011039, 0.010278, 0.009652, 0.009108, 0.008642, 0.008255, 0.007941, 0.007731, 0.007602, 0.007508, 0.00749, 0.00749, 0.00749 ], "europe_clade:18": [ 0.103877, 0.103751, 0.102337, 0.100044, 0.097092, 0.094502, 0.092715, 0.09015, 0.086893, 0.082497, 0.077805, 0.072592, 0.068361, 0.063219, 0.057377, 0.051522, 0.046331, 0.041863, 0.03786, 0.034217, 0.030905, 0.028118, 0.025793, 0.023797, 0.022078, 0.020557, 0.019303, 0.018217, 0.017283, 0.01651, 0.015883, 0.015462, 0.015204, 0.015017, 0.01498, 0.01498, 0.014981 ], "europe_clade:19": [ 0.051938, 0.051876, 0.051169, 0.050022, 0.048546, 0.047251, 0.046357, 0.045075, 0.043447, 0.041249, 0.038903, 0.036296, 0.034181, 0.031609, 0.028688, 0.025761, 0.023165, 0.020931, 0.01893, 0.017109, 0.015453, 0.014059, 0.012897, 0.011899, 0.011039, 0.010278, 0.009652, 0.009108, 0.008642, 0.008255, 0.007941, 0.007731, 0.007602, 0.007508, 0.00749, 0.00749, 0.00749 ], "north_america_clade:182": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:183": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:180": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:181": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:186": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:187": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:184": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:185": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:188": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "north_america_clade:189": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_3c3.A": [ 0.10902, 0.108446, 0.104324, 0.101084, 0.09834, 0.096748, 0.096289, 0.091603, 0.082827, 0.073015, 0.064387, 0.057043, 0.050778, 0.045156, 0.040217, 0.035972, 0.032069, 0.028706, 0.025858, 0.023293, 0.021181, 0.019371, 0.017824, 0.016496, 0.015361, 0.014351, 0.013565, 0.012876, 0.012301, 0.011896, 0.01157, 0.011313, 0.011217, 0.011168, 0.011169, 0.0, 0.0 ], "china_3c3.B": [ 0.05451, 0.054223, 0.052162, 0.050542, 0.04917, 0.048374, 0.048144, 0.045802, 0.041413, 0.036508, 0.032193, 0.028522, 0.025389, 0.022578, 0.020108, 0.017986, 0.016034, 0.014353, 0.012929, 0.011647, 0.010591, 0.009685, 0.008912, 0.008248, 0.00768, 0.007175, 0.006782, 0.006438, 0.00615, 0.005948, 0.005785, 0.005657, 0.005609, 0.005584, 0.005585, 0.0, 0.0 ], "europe_clade:468": [ 0.366882, 0.367359, 0.372756, 0.38151, 0.392776, 0.401848, 0.410095, 0.421729, 0.43598, 0.388866, 0.405751, 0.425368, 0.44731, 0.473679, 0.502945, 0.531682, 0.556569, 0.582227, 0.610287, 0.637446, 0.662562, 0.683555, 0.578486, 0.590279, 0.599003, 0.605389, 0.608169, 0.608473, 0.606443, 0.60168, 0.59648, 0.597063, 0.6023, 0.606134, 0.606821, 0.606723, 0.606663 ], "europe_clade:469": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:460": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.032864, 0.034291, 0.035949, 0.037802, 0.040031, 0.042502, 0.045198, 0.048078, 0.048497, 0.046394, 0.043724, 0.041111, 0.038801, 0.03039, 0.028947, 0.027639, 0.026439, 0.025407, 0.02448, 0.023657, 0.022945, 0.022348, 0.021975, 0.021774, 0.021627, 0.021593, 0.02159, 0.021589 ], "europe_clade:461": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:462": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:463": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:464": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:465": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "europe_clade:466": [ 0.366882, 0.367359, 0.372756, 0.38151, 0.392776, 0.401848, 0.410095, 0.421729, 0.43598, 0.388866, 0.405751, 0.425368, 0.44731, 0.473679, 0.502945, 0.531682, 0.556569, 0.582227, 0.610287, 0.637446, 0.662562, 0.683555, 0.578486, 0.590279, 0.599003, 0.605389, 0.608169, 0.608473, 0.606443, 0.60168, 0.59648, 0.597063, 0.6023, 0.606134, 0.606821, 0.606723, 0.606663 ], "europe_clade:467": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "southeast_asia_clade:122": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:499": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:498": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "southeast_asia_clade:123": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:493": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:492": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:491": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:490": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:497": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:496": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:495": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:494": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:141": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:140": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:143": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:142": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:145": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:144": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:147": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:146": [ 0.0, 0.0, 0.329341, 0.329341, 0.329341, 0.328592, 0.322529, 0.31307, 0.300027, 0.282082, 0.264165, 0.246961, 0.231793, 0.220748, 0.211463, 0.203227, 0.197362, 0.162683, 0.161001, 0.159397, 0.158895, 0.160456, 0.163038, 0.16443, 0.160619, 0.155412, 0.151771, 0.149532, 0.148572, 0.148533, 0.148529, 0.148526, 0.148527, 0.148531, 0.148533, 0.148537, 0.0 ], "south_asia_clade:149": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_asia_clade:148": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:149": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:148": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:147": [ 0.0, 0.0, 0.024544, 0.024582, 0.02496, 0.025455, 0.02624, 0.027118, 0.028375, 0.029822, 0.031029, 0.030931, 0.031077, 0.031619, 0.032076, 0.031081, 0.03015, 0.026599, 0.026279, 0.026114, 0.026227, 0.02655, 0.027069, 0.027693, 0.028629, 0.029625, 0.031096, 0.032791, 0.034449, 0.034752, 0.035277, 0.036232, 0.037328, 0.038658, 0.039021, 0.03902, 0.03902 ], "japan_korea_clade:146": [ 0.0, 0.0, 0.024544, 0.024582, 0.02496, 0.025455, 0.02624, 0.027118, 0.028375, 0.029822, 0.031029, 0.030931, 0.031077, 0.031619, 0.032076, 0.031081, 0.03015, 0.026599, 0.026279, 0.026114, 0.026227, 0.02655, 0.027069, 0.027693, 0.028629, 0.029625, 0.031096, 0.032791, 0.034449, 0.034752, 0.035277, 0.036232, 0.037328, 0.038658, 0.039021, 0.03902, 0.03902 ], "japan_korea_clade:145": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:144": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:143": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:142": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:141": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "japan_korea_clade:140": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "west_asia_A2": [ 0.051165, 0.034984, 0.034984, 0.034984, 0.034984, 0.035021, 0.035152, 0.035513, 0.035822, 0.03586, 0.036337, 0.037102, 0.038005, 0.039276, 0.040414, 0.041136, 0.041386, 0.041491, 0.041067, 0.040498, 0.040215, 0.040171, 0.04025, 0.040739, 0.041648, 0.042893, 0.044035, 0.044961, 0.04589, 0.046726, 0.047271, 0.047298, 0.047614, 0.047885, 0.047883, 0.047882, 0.047882 ], "west_asia_A3": [ 0.0, 0.204775, 0.204774, 0.204774, 0.204774, 0.205561, 0.207123, 0.210465, 0.214571, 0.219717, 0.2278, 0.238053, 0.249643, 0.260562, 0.270536, 0.282302, 0.296355, 0.31101, 0.32874, 0.346113, 0.358869, 0.367832, 0.374902, 0.376351, 0.37225, 0.363842, 0.356141, 0.350136, 0.344081, 0.338714, 0.335644, 0.336701, 0.334073, 0.331808, 0.331784, 0.33176, 0.331754 ], "west_asia_A1": [ 0.460486, 0.314859, 0.314857, 0.314857, 0.314858, 0.315188, 0.316371, 0.319613, 0.322399, 0.322741, 0.327032, 0.333915, 0.342045, 0.353488, 0.363728, 0.370224, 0.372475, 0.373419, 0.369607, 0.36448, 0.361931, 0.361537, 0.362253, 0.366653, 0.374828, 0.386035, 0.396314, 0.40465, 0.413006, 0.420533, 0.425438, 0.425684, 0.428522, 0.430962, 0.43095, 0.430939, 0.430935 ], "west_asia_A4": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:485": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:484": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:487": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:486": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:481": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:480": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:483": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:482": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:489": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "oceania_clade:488": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:143": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:142": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:141": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:140": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:147": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:146": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:145": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:144": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:149": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "china_clade:148": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:118": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:119": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:448": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:449": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:112": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:113": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:110": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:111": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:116": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:117": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:442": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "south_pacific_clade:115": [ 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0 ], "global_clade:474": [ 0.010752, 0.010804, 0.011325, 0.012332, 0.007092, 0.007872, 0.004938, 0.005754, 0.006717, 0.007958, 0.00678, 0.007986, 0.009013, 0.009547, 0.010119, 0.010522, 0.010846, 0.01122, 0.011004, 0.010939, 0.010484, 0.009905, 0.009061, 0.008209, 0.007426, 0.006659, 0.00605, 0.005465, 0.004826, 0.004293, 0.003789, 0.003448, 0.003327, 0.003246, 0.00324, 0.00324, 0.0 ], "global_clade:475": [ 0.005376, 0.005402, 0.005662, 0.006166, 0.003546, 0.003936, 0.002469, 0.002877, 0.003358, 0.003979, 0.00339, 0.003993, 0.004506, 0.004774, 0.00506, 0.005261, 0.005423, 0.00561, 0.005502, 0.005469, 0.005242, 0.004953, 0.00453, 0.004104, 0.003713, 0.003329, 0.003025, 0.002732, 0.002413, 0.002146, 0.001895, 0.001724, 0.001664, 0.001623, 0.00162, 0.00162, 0.0 ], "global_clade:476": [ 0.005376, 0.005402, 0.005662, 0.006166, 0.003546, 0.003936, 0.002469, 0.002877, 0.003358, 0.003979, 0.00339, 0.003993, 0.004506, 0.004774, 0.00506, 0.005261, 0.005423, 0.00561, 0.005502, 0.005469, 0.005242, 0.004953, 0.00453, 0.004104, 0.003713, 0.003329, 0.003025, 0.002732, 0.002413, 0.002146, 0.001895, 0.001724, 0.001664, 0.001623, 0.00162, 0.00162, 0.0 ], "global_clade:477": [ 0.048385, 0.048618, 0.050961, 0.055495, 0.031913, 0.035424, 0.022223, 0.025893, 0.030224, 0.035813, 0.03051, 0.035939, 0.040558, 0.042962, 0.045536, 0.047348, 0.048809, 0.050492, 0.049518, 0.049225, 0.047178, 0.044573, 0.040773, 0.03694, 0.033415, 0.029964, 0.027225, 0.02459, 0.021718, 0.019317, 0.017052, 0.015517, 0.014973, 0.014608, 0.014581, 0.014581, 0.0 ], "global_clade:470": [ 0.005376, 0.005402, 0.005662, 0.006166, 0.003546, 0.003936, 0.002469, 0.002877, 0.003358, 0.003979, 0.00339, 0.003993, 0.004506, 0.004774, 0.00506, 0.005261, 0.005423, 0.00561, 0.005502, 0.005469, 0.005242, 0.004953, 0.00453, 0.004104, 0.003713, 0.003329, 0.003025, 0.002732, 0.002413, 0.002146, 0.001895, 0.001724, 0.001664, 0.001623, 0.00162, 0.00162, 0.0 ], "pivots": [ 2015.25, 2015.333333, 2015.416667, 2015.5, 2015.583333, 2015.666667, 2015.75, 2015.833333, 2015.916667, 2016.0, 2016.083333, 2016.166667, 2016.25, 2016.333333, 2016.416667, 2016.5, 2016.583333, 2016.666667, 2016.75, 2016.833333, 2016.916667, 2017.0, 2017.083333, 2017.166667, 2017.25, 2017.333333, 2017.416667, 2017.5, 2017.583333, 2017.666667, 2017.75, 2017.833333, 2017.916667, 2018.0, 2018.083333, 2018.166667, 2018.25 ] } augur-24.2.2/tests/data/json_tree_to_nexus/flu_h3n2_ha_3y_tree.json000066400000000000000000000042501456376326500253520ustar00rootroot00000000000000{ "attr": { "num_date": 2011.4357404446994, "num_date_confidence": [ 2010.861842426969, 2011.5707023407906 ], "region_confidence": { "china": 0.06722111214517357, "north_america": 0.9222276551894675 }, "region": "north_america", "region_entropy": 0.11587017979552892, "ne": 0, "dTiter": 0, "rb": 0, "cTiter": 0, "div": 0, "ep": 0 }, "tvalue": 0.0, "clade": 0, "children": [ { "xvalue": 0.0, "muts": [], "clade": 1, "serum": false, "strain": "NODE_0001489", "aa_muts": { "SigPep": [], "HA1": [], "HA2": [] }, "tvalue": 0.0263, "yvalue": 1983.29353, "attr": { "num_date": 2011.4620378591503, "num_date_confidence": [ 2010.9816794174155, 2011.601249575312 ], "region_confidence": { "china": 0.06719971535813674, "north_america": 0.9222123667187458 }, "region": "north_america", "region_entropy": 0.11592745717424116, "ne": 0, "dTiter": 0, "rb": 0, "cTiter": 0, "div": 6.555195508771621e-09, "ep": 0 } }, { "xvalue": 0.00232, "muts": [ "G707A", "A735G", "G1274A" ], "clade": 958, "serum": false, "strain": "NODE_0001488", "aa_muts": { "SigPep": [], "HA1": [ "N225D" ], "HA2": [] }, "tvalue": 1.5211, "yvalue": 1485.99913, "attr": { "num_date": 2012.9568425862485, "num_date_confidence": [ 2012.2476936602595, 2013.6105467885995 ], "region_confidence": { "china": 0.06846146328541534, "north_america": 0.9231177488469717 }, "region": "north_america", "region_entropy": 0.11218417062702112, "ne": 1, "dTiter": 0.3346785420619274, "rb": 0, "cTiter": 0.3346785420619274, "div": 0.0023184932122319946, "ep": 0 } } ], "strain": "NODE_0002020", "serum": false, "yvalue": 1734.64633, "xvalue": 0.0 } augur-24.2.2/tests/data/json_tree_to_nexus/flu_h3n2_ha_3y_tree.nex000066400000000000000000000021571456376326500251770ustar00rootroot00000000000000#NEXUS Begin taxa; Dimensions ntax=2; Taxlabels NODE_0001489 NODE_0001488 ; End; Begin trees; Translate 1 NODE_0001489, 2 NODE_0001488 ; tree TREE1 = [&R] (1[&num_date="2011.46203786",num_date_confidence="[2010.9816794174155, 2011.601249575312]",region_confidence="{u'china': 0.06719971535813674, u'north_america': 0.9222123667187458}",region="north_america",region_entropy="0.115927457174",ne="0",dTiter="0",rb="0",cTiter="0",div="6.55519550877e-09",ep="0"]:6.55519550877e-09,2[&num_date="2012.95684259",num_date_confidence="[2012.2476936602595, 2013.6105467885995]",region_confidence="{u'china': 0.06846146328541534, u'north_america': 0.9231177488469717}",region="north_america",region_entropy="0.112184170627",ne="1",dTiter="0.334678542062",rb="0",cTiter="0.334678542062",div="0.00231849321223",ep="0"]:0.00231849321223)[&num_date="2011.43574044",num_date_confidence="[2010.861842426969, 2011.5707023407906]",region_confidence="{u'china': 0.06722111214517357, u'north_america': 0.9222276551894675}",region="north_america",region_entropy="0.115870179796",ne="0",dTiter="0",rb="0",cTiter="0",div="0",ep="0"]:0.0; End;augur-24.2.2/tests/data/tb_lee_2015.vcf000066400000000000000000753661021456376326500174450ustar00rootroot00000000000000##fileformat=VCFv4.2 ##FILTER= ##FILTER= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT== 20"> ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##GATKCommandLine.CombineVariants= ##INFO= ##INFO== 20"> ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##SnpEffCmd="SnpEff -noStats -no-downstream -no-upstream MTB_ANC /scratch/loiseau/slurm-job.15229039/tmpULKfAx_VCF " ##SnpEffVersion="4.1l (build 2015-10-03), by Pablo Cingolani" ##contig= ##reference=file:///scicore/home/gagneux/menardo/MTB-pipeline/Pipeline_TB/MTB_ref_fasta/MTB_ancestor_reference.fasta ##source=VarScan2 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT G22565 G22566 G22567 G22568 G22569 G22571 G22572 G22573 G22574 G22575 G22576 G22577 G22578 G22579 G22580 G22581 G22582 G22583 G22584 G22585 G22586 G22587 G22589 G22590 G22591 G22592 G22593 G22595 G22596 G22597 G22598 G22599 G22600 G22601 G22602 G22603 G22604 G22605 G22606 G22607 G22608 G22609 G22610 G22611 G22612 G22613 G22614 G22615 G22616 G22617 G22618 G22619 G22620 G22621 G22622 G22623 G22624 G22625 G22626 G22627 G22628 G22629 G22631 G22632 G22633 G22634 G22635 G22636 G22637 G22638 G22639 G22640 G22642 G22643 G22644 G22645 G22648 G22649 G22650 G22651 G22652 G22653 G22654 G22655 G22656 G22657 G22658 G22659 G22660 G22662 G22663 G22664 G22665 G22666 G22667 G22668 G22669 G22670 G22671 G22672 G22673 G22674 G22675 G22676 G22677 G22678 G22679 G22680 G22681 G22682 G22683 G22684 G22685 G22686 G22687 G22688 G22689 G22690 G22691 G22692 G22693 G22695 G22696 G22697 G22698 G22699 G22700 G22701 G22702 G22703 G22704 G22705 G22706 G22707 G22708 G22709 G22710 G22711 G22712 G22713 G22717 G22722 G22723 G22724 G22725 G22726 G22727 G22730 G22732 G22733 MTB_anc 1199 . G A . PASS AC=3;AF=0.010;AN=300;ANN=A|missense_variant|MODERATE|dnaA_Rv0001|gene0|transcript|Transcript_gene0|Coding|1/1|c.1199G>A|p.Arg400His|1199/1524|1199/1524|400/507||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1199G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1199G>A||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:49 0/0:0:0:0:0:31:0%:59:1E0:52:31:16:15:31 0/0:0:0:0:0:48:0%:89:1E0:47:48:24:24:48 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:35 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:30 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:28 0/0:60:1:1:0:33:3.03%:52:5E-1:47:32:10:22:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:41 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:19 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:31 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:15 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:22 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:22:0%:40:1E0:50:22:13:9:23 0/0:0:0:0:0:58:0%:99:1E0:44:58:30:28:58 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:30:1:1:0:21:4.76%:31:5E-1:43:20:13:7:23 0/0:0:0:0:0:18:0%:32:1E0:47:18:6:12:18 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:23 0/1:46:11:5:6:14:78.57%:47:1.6951E-5:48:3:3:0:14 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:17:7:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:6:16:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:6:16:22 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:50 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:49:0%:93:1E0:46:49:28:21:50 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:47 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:38 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:23 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:7:18:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:41 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:31 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:18 0/0:0:0:0:0:46:0%:85:1E0:44:46:25:21:46 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:44:0%:81:1E0:46:44:18:26:45 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:39 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:44 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:27 0/0:0:0:0:0:57:0%:99:1E0:44:57:26:31:58 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:44 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:38 0/0:0:0:0:0:10:0%:17:1E0:57:10:4:6:11 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:39:1:1:0:39:2.56%:62:5E-1:41:38:22:16:39 0/0:39:1:1:0:22:4.55%:31:5E-1:49:21:9:12:22 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:24 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:16 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:31 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:17:0%:33:1E0:44:17:15:2:18 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:21:9:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:29 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:41 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:33 0/0:0:0:0:0:49:0%:93:1E0:44:49:20:29:50 0/0:0:0:0:0:55:0%:99:1E0:40:55:24:31:57 0/0:0:0:0:0:48:0%:89:1E0:40:48:28:20:49 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:62:0%:99:1E0:43:62:24:38:64 0/0:0:0:0:0:55:0%:99:1E0:42:55:23:32:55 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:25 0/0:0:0:0:0:42:0%:77:1E0:39:42:20:22:42 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:37 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:51 0/0:0:0:0:0:37:0%:70:1E0:37:37:25:12:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:38 0/0:0:0:0:0:36:0%:66:1E0:38:36:22:14:37 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:37 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:35 0/0:0:0:0:0:64:0%:99:1E0:40:64:24:40:66 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:40 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:37 0/0:0:0:0:0:39:0%:74:1E0:39:39:26:13:41 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:50 0/0:0:0:0:0:41:0%:78:1E0:37:41:22:19:44 0/0:0:0:0:0:53:0%:99:1E0:41:53:26:27:55 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:37 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:48 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:36 0/0:0:0:0:0:40:0%:74:1E0:38:40:20:20:40 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:49 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:50 0/0:0:0:0:0:46:0%:85:1E0:39:46:23:23:47 MTB_anc 1463 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|dnaA_Rv0001|gene0|transcript|Transcript_gene0|Coding|1/1|c.1463G>C|p.Arg488Pro|1463/1524|1463/1524|488/507||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1463G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1463G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:45 0/0:0:0:0:0:24:0%:44:1E0:54:24:14:10:25 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:46 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:43 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:60:1:1:0:32:3.12%:48:5E-1:48:31:22:9:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:50:30:17:13:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:48:0%:89:1E0:45:48:20:28:48 0/0:0:0:0:0:43:0%:82:1E0:50:43:17:26:43 0/0:0:0:0:0:45:0%:85:1E0:48:45:21:24:46 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:19 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:14:0%:25:1E0:50:14:5:9:14 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:21:0%:40:1E0:53:21:10:11:22 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:53:0%:99:1E0:45:53:25:28:53 0/0:0:0:0:0:38:0%:70:1E0:46:38:26:12:39 0/1:53:7:3:4:43:16.28%:22:5.9972E-3:44:36:18:18:43 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:47:32:22:10:33 0/0:0:0:0:0:23:0%:44:1E0:51:23:9:14:23 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:11:0%:22:1E0:45:11:5:6:12 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:18:0%:32:1E0:45:18:5:13:18 0/0:0:0:0:0:25:0%:48:1E0:50:25:11:14:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:55:0%:99:1E0:46:55:23:32:55 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:45 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:23 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:21 0/0:0:0:0:0:35:0%:67:1E0:47:35:12:23:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:12:27:39 0/0:0:0:0:0:50:0%:92:1E0:47:50:23:27:50 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:13:24:38 0/0:60:1:0:1:23:4.35%:34:5E-1:40:22:9:13:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:39 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:32 0/0:0:0:0:0:44:0%:81:1E0:49:44:24:20:44 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:48 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:48:0%:89:1E0:47:48:23:25:48 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:31:0%:59:1E0:49:31:12:19:34 0/0:0:0:0:0:18:0%:32:1E0:49:18:7:11:18 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:32:0%:59:1E0:52:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:22 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:27:0%:52:1E0:48:27:7:20:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:37 0/0:0:0:0:0:33:0%:63:1E0:50:33:20:13:33 0/0:0:0:0:0:26:0%:47:1E0:51:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:49:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:50:27:12:15:27 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:48 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:43 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:33 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:47 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:8:22:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:38:1:1:0:45:2.22%:73:5E-1:46:44:19:25:45 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:40 0/0:0:0:0:0:52:0%:96:1E0:40:52:27:25:53 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:35 0/0:0:0:0:0:47:0%:89:1E0:48:47:26:21:47 0/0:0:0:0:0:23:0%:44:1E0:41:23:6:17:23 0/0:0:0:0:0:65:0%:99:1E0:43:65:29:36:65 0/0:0:0:0:0:58:0%:99:1E0:42:58:32:26:60 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:39 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:38 0/0:0:0:0:0:50:0%:92:1E0:44:50:21:29:51 0/0:0:0:0:0:44:0%:81:1E0:41:44:29:15:47 0/0:0:0:0:0:49:0%:93:1E0:41:49:21:28:51 0/0:0:0:0:0:46:0%:85:1E0:40:46:19:27:47 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:42 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:38 0/0:0:0:0:0:56:0%:99:1E0:41:56:21:35:56 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:65:0%:99:1E0:41:65:32:33:65 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:47 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:45:0%:85:1E0:41:45:28:17:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:12:28:40 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:42 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:44 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:39 0/0:0:0:0:0:65:0%:99:1E0:44:65:32:33:66 0/0:0:0:0:0:63:0%:99:1E0:41:63:26:37:64 MTB_anc 2018 . C T . PASS AC=14;AF=0.047;AN=300;ANN=T|intergenic_region|MODIFIER|dnaA_Rv0001-dnaN_Rv0002|gene0-gene1|intergenic_region|gene0-gene1|||n.2018C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:37:36:14:22:36 0/0:0:0:0:0:15:0%:29:1E0:41:15:4:11:16 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:34 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:26 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:6:17:24 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:33 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:30 0/0:0:0:0:0:39:0%:74:1E0:38:39:12:27:41 0/0:0:0:0:0:24:0%:44:1E0:41:24:8:16:24 0/0:0:0:0:0:42:0%:77:1E0:38:42:16:26:42 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:29 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:27 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:19 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 0/0:0:0:0:0:30:0%:55:1E0:37:30:8:22:31 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:28 0/0:0:0:0:0:37:0%:70:1E0:38:37:14:23:38 0/0:0:0:0:0:29:0%:55:1E0:38:29:8:21:29 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:20 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:22 0/0:0:0:0:0:24:0%:44:1E0:40:24:4:20:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:18 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:31:0%:59:1E0:38:31:10:21:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:30 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:25 0/0:0:0:0:0:29:0%:55:1E0:38:29:8:21:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:10:20:30 0/0:0:0:0:0:29:0%:55:1E0:38:29:7:22:29 0/0:0:0:0:0:59:0%:99:1E0:38:59:26:33:59 0/0:0:0:0:0:33:0%:63:1E0:38:33:12:21:33 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:24 0/0:0:0:0:0:29:0%:55:1E0:38:29:9:20:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:26 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:13 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:13 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:23 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:29 0/0:0:0:0:0:15:0%:29:1E0:40:15:5:10:15 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:33 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:26 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:18 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:22 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:15 0/0:39:1:1:0:31:3.23%:48:5E-1:39:30:11:19:31 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:33 0/0:0:0:0:0:23:0%:44:1E0:38:23:5:18:23 0/0:0:0:0:0:32:0%:59:1E0:38:32:10:22:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:34 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:20 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:22 0/0:0:0:0:0:32:0%:59:1E0:37:32:12:20:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:30 0/0:0:0:0:0:34:0%:62:1E0:38:34:12:22:34 0/0:0:0:0:0:43:0%:82:1E0:37:43:14:29:43 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:32 0/0:0:0:0:0:7:0%:14:1E0:43:7:3:4:7 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:23 0/0:0:0:0:0:40:0%:74:1E0:39:40:15:25:41 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:12 0/0:0:0:0:0:29:0%:55:1E0:41:29:8:21:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:4:18:22 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:22 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:26 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:21 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:16 0/0:0:0:0:0:13:0%:25:1E0:39:13:6:7:13 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:36:0%:66:1E0:39:36:10:26:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:9:21:30 0/0:0:0:0:0:19:0%:37:1E0:37:19:4:15:19 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:23 0/0:0:0:0:0:33:0%:63:1E0:37:33:13:20:34 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:19 0/0:0:0:0:0:32:0%:59:1E0:38:32:12:20:32 0/0:0:0:0:0:22:0%:40:1E0:37:22:14:8:22 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:34 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:19 0/0:0:0:0:0:33:0%:63:1E0:37:33:8:25:34 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:25 0/0:0:0:0:0:39:0%:74:1E0:36:39:11:28:40 0/0:0:0:0:0:29:0%:55:1E0:37:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:36:25:7:18:25 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 0/0:0:0:0:0:28:0%:51:1E0:37:28:4:24:28 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:15 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:18 0/0:0:0:0:0:29:0%:55:1E0:38:29:10:19:30 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:21 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:23 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:22 0/0:0:0:0:0:24:0%:44:1E0:39:24:9:15:24 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:18 0/0:0:0:0:0:29:0%:55:1E0:39:29:9:20:30 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:39:0%:74:1E0:36:39:8:31:40 0/0:0:0:0:0:45:0%:85:1E0:37:45:19:26:45 0/0:37:1:0:1:18:5.56%:24:5E-1:37:17:6:11:19 0/0:0:0:0:0:35:0%:67:1E0:37:35:11:24:36 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:20 0/0:0:0:0:0:59:0%:99:1E0:38:59:16:43:59 0/0:0:0:0:0:51:0%:97:1E0:37:51:12:39:51 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:24 0/0:0:0:0:0:32:0%:59:1E0:37:32:9:23:35 0/0:0:0:0:0:39:0%:74:1E0:36:39:13:26:41 0/0:0:0:0:0:36:0%:66:1E0:35:36:12:24:38 0/0:0:0:0:0:30:0%:55:1E0:36:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:37:30:6:24:34 0/0:0:0:0:0:38:0%:70:1E0:36:38:11:27:40 1/1:37:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:28:0%:51:1E0:36:28:8:20:29 1/1:37:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:32:0%:59:1E0:36:32:11:21:33 0/0:0:0:0:0:32:0%:59:1E0:36:32:12:20:33 0/0:0:0:0:0:26:0%:47:1E0:35:26:6:20:28 0/0:0:0:0:0:24:0%:44:1E0:35:24:8:16:24 0/0:0:0:0:0:37:0%:70:1E0:37:37:9:28:37 0/0:0:0:0:0:48:0%:89:1E0:36:48:7:41:49 0/0:0:0:0:0:50:0%:92:1E0:39:50:15:35:50 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:36 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:32 0/0:0:0:0:0:38:0%:70:1E0:37:38:17:21:38 0/0:0:0:0:0:25:0%:48:1E0:38:25:6:19:25 0/0:0:0:0:0:27:0%:52:1E0:36:27:9:18:28 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:27 0/0:0:0:0:0:20:0%:36:1E0:38:20:5:15:20 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:32 0/0:0:0:0:0:36:0%:66:1E0:37:36:10:26:36 0/0:0:0:0:0:45:0%:85:1E0:38:45:15:30:45 0/0:0:0:0:0:29:0%:55:1E0:38:29:8:21:29 MTB_anc 2532 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|dnaN_Rv0002|gene1|transcript|Transcript_gene1|Coding|1/1|c.481C>T|p.Leu161Leu|481/1209|481/1209|161/402||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2532C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.2532C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:52:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:52:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:30:18:12:31:96.77%:99:8.4556E-18:0:0:0:0:34 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:23:11:12:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:20:13:7:21:95.24%:99:7.2544E-12:0:0:0:0:22 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:48:30:18:48:100%:99:1.554E-28:0:0:0:0:54 1/1:44:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:52 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:69:29:40:69:100%:99:4.233E-41:0:0:0:0:71 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 MTB_anc 3132 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|dnaN_Rv0002|gene1|transcript|Transcript_gene1|Coding|1/1|c.1081A>C|p.Lys361Gln|1081/1209|1081/1209|361/402||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3132A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3132A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:42 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:28 0/0:0:0:0:0:50:0%:92:1E0:46:50:25:25:51 0/0:0:0:0:0:58:0%:99:1E0:45:58:28:30:58 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:20:0%:36:1E0:42:20:16:4:20 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:45 0/0:0:0:0:0:34:0%:62:1E0:48:34:21:13:34 0/0:0:0:0:0:36:0%:66:1E0:47:36:24:12:38 0/0:0:0:0:0:46:0%:85:1E0:44:46:31:15:47 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:42 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:40 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:23 0/0:0:0:0:0:22:0%:40:1E0:51:22:14:8:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:26:14:40 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:42 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:15:0%:29:1E0:45:15:12:3:15 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:31 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:42 0/0:0:0:0:0:52:0%:96:1E0:46:52:35:17:55 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:51 0/0:0:0:0:0:44:0%:81:1E0:46:44:24:20:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:19 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:38:0%:70:1E0:46:38:26:12:42 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:43 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:45 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:19 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:33 0/0:0:0:0:0:43:0%:82:1E0:46:43:25:18:43 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:46:0%:85:1E0:40:46:27:19:46 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:61:0%:99:1E0:47:61:34:27:61 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:16:0%:29:1E0:45:16:11:5:16 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:46:0%:85:1E0:47:46:32:14:46 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:23 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:38:0%:70:1E0:49:38:23:15:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:25 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:49:0%:93:1E0:47:49:27:22:51 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:31:0%:59:1E0:49:31:18:13:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:23 0/0:0:0:0:0:22:0%:40:1E0:47:22:16:6:23 0/0:0:0:0:0:15:0%:29:1E0:46:15:5:10:15 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:54 0/0:38:1:1:0:21:4.76%:31:5E-1:43:20:12:8:21 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:39 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:39 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:45:0%:85:1E0:43:45:29:16:45 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:60:1:1:0:26:3.85%:38:5E-1:49:25:11:14:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:49 0/0:0:0:0:0:40:0%:74:1E0:40:40:27:13:41 0/0:0:0:0:0:51:0%:97:1E0:40:51:29:22:52 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:20:10:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:28 0/0:0:0:0:0:52:0%:96:1E0:42:52:32:20:53 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:46 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:31 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:46 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:36 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:46 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:38 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:54 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:33 0/0:0:0:0:0:58:0%:99:1E0:38:58:35:23:60 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:44 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:41:0%:78:1E0:42:41:29:12:42 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:46 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/1:46:10:6:4:31:32.26%:33:4.1251E-4:44:21:10:11:31 0/0:0:0:0:0:56:0%:99:1E0:43:56:34:22:57 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:61:0%:99:1E0:41:61:42:19:61 0/0:0:0:0:0:55:0%:99:1E0:42:55:29:26:55 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 MTB_anc 4663 . G C . PASS AC=299;AF=0.997;AN=300;ANN=C|missense_variant|MODERATE|Rv0004_Rv0004|gene3|transcript|Transcript_gene3|Coding|1/1|c.230G>C|p.Gly77Ala|230/564|230/564|77/187||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4663G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4663G>C||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:64:28:36:64:100%:99:4.1752E-38:0:0:0:0:65 0/1:52:14:9:5:16:87.5%:76:2.4927E-8:0:0:0:0:18 1/1:46:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:50:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:60:28:32:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:46:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:50:34:16:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:37:15:22:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:52:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:19:22:42:97.62%:99:2.5612E-23:60:1:0:1:42 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:40:12:28:41:97.56%:99:9.8874E-23:37:1:0:1:44 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:41:14:27:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:65:36:29:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:74:32:42:74:100%:99:4.2804E-44:0:0:0:0:74 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 5887 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|gyrB_Rv0005|gene4|transcript|Transcript_gene4|Coding|1/1|c.648C>T|p.Asp216Asp|648/2028|648/2028|216/675||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.5887C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.5887C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|moxifloxacin_gatifloxacin_ofloxacin_levofloxacin|||n.5887C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:52:0%:96:1E0:48:52:29:23:52 0/0:0:0:0:0:37:0%:70:1E0:49:37:15:22:37 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:50:36:21:15:36 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:25 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 0/0:0:0:0:0:42:0%:77:1E0:46:42:24:18:42 0/0:0:0:0:0:25:0%:48:1E0:50:25:11:14:26 0/0:32:1:1:0:50:2%:80:5E-1:45:49:26:23:50 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:26 0/0:0:0:0:0:18:0%:32:1E0:47:18:12:6:18 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:21 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:22 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:17 0/0:0:0:0:0:54:0%:99:1E0:45:54:30:24:54 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:19 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:17:0%:33:1E0:47:17:7:10:17 0/0:0:0:0:0:27:0%:52:1E0:52:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:34:0%:62:1E0:46:34:23:11:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:36 0/0:0:0:0:0:63:0%:99:1E0:48:63:32:31:63 0/0:0:0:0:0:39:0%:74:1E0:49:39:18:21:40 0/0:0:0:0:0:44:0%:81:1E0:47:44:19:25:44 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:23 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:60:1:0:1:20:5%:27:5E-1:46:19:12:7:20 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:29 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:12:21:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:42 0/0:0:0:0:0:39:0%:74:1E0:51:39:17:22:39 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:18 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:21 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:39:0%:74:1E0:51:39:20:19:40 0/0:0:0:0:0:25:0%:48:1E0:47:25:17:8:25 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:44 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:42 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:40 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:65:0%:99:1E0:43:65:33:32:66 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:11:0%:22:1E0:53:11:7:4:11 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:21 0/0:0:0:0:0:24:0%:44:1E0:52:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:51:26:11:15:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:18:0%:32:1E0:45:18:5:13:18 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:25:0%:48:1E0:51:25:15:10:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:22:14:37 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:21:9:30 0/0:0:0:0:0:22:0%:40:1E0:46:22:7:15:23 0/0:0:0:0:0:23:0%:44:1E0:49:23:8:15:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:38 0/0:0:0:0:0:26:0%:47:1E0:49:26:9:17:26 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:37 0/0:0:0:0:0:23:0%:44:1E0:51:23:15:8:23 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:46 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:47 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:20 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:46 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:0:0:0:0:59:0%:99:1E0:44:59:29:30:62 0/0:0:0:0:0:49:0%:93:1E0:43:49:20:29:49 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:53:0%:99:1E0:43:53:23:30:54 0/0:0:0:0:0:38:0%:70:1E0:40:38:14:24:38 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:41 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:48 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:48 0/0:0:0:0:0:48:0%:89:1E0:43:48:30:18:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:48 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:35 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:30:0%:55:1E0:40:30:9:21:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:65:0%:99:1E0:39:65:34:31:65 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:45 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:48 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:45 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:42 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:50 0/0:0:0:0:0:61:0%:99:1E0:42:61:28:33:62 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:40 MTB_anc 7581 . G T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|gyrA_Rv0006|gene5|transcript|Transcript_gene5|Coding|1/1|c.280G>T|p.Asp94Tyr|280/2517|280/2517|94/838||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.7581G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.7581G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|moxifloxacin_gatifloxacin_ofloxacin_levofloxacin|||n.7581G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Walker_DrugResistance_QRDR|||n.7581G>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:41:53:27:26:54 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:33 0/0:0:0:0:0:51:0%:97:1E0:47:51:29:22:54 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:41:0%:78:1E0:50:41:26:15:41 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:38 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:63:0%:99:1E0:45:63:27:36:65 0/0:0:0:0:0:14:0%:25:1E0:53:14:7:7:14 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:49 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:22:0%:40:1E0:46:22:15:7:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:23 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:10:26:36 0/0:0:0:0:0:47:0%:89:1E0:46:47:18:29:47 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:52 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:52:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:49:26:9:17:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/1:44:22:14:8:30:73.33%:93:4.1351E-10:43:8:3:5:30 0/0:0:0:0:0:51:0%:97:1E0:47:51:32:19:51 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:48 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:33 0/0:0:0:0:0:55:0%:99:1E0:41:55:33:22:57 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:15:26:41 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:22 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:13:0%:25:1E0:47:13:7:6:13 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:48 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:23 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:46 0/0:0:0:0:0:53:0%:99:1E0:44:53:26:27:55 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:33 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:43 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:40:0%:74:1E0:50:40:24:16:40 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:39:1:0:1:18:5.56%:24:5E-1:46:17:10:7:19 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:16:0%:29:1E0:47:16:13:3:16 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:26:0%:47:1E0:51:26:16:10:26 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:38 0/0:0:0:0:0:44:0%:81:1E0:45:44:17:27:45 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:42 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:45 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:16:0%:29:1E0:43:16:9:7:16 0/0:0:0:0:0:41:0%:78:1E0:49:41:24:17:41 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:17:0%:33:1E0:45:17:13:4:17 0/0:0:0:0:0:58:0%:99:1E0:41:58:36:22:59 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:55:0%:99:1E0:44:55:30:25:56 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:34 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:46 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:23 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:29:1:0:1:41:2.44%:66:5E-1:44:40:25:15:41 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:20:1:1:0:32:3.12%:48:5E-1:43:31:20:11:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:23 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:41 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:39 0/0:0:0:0:0:36:0%:66:1E0:37:36:22:14:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:62:0%:99:1E0:43:62:31:31:63 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:47 0/0:0:0:0:0:43:0%:82:1E0:44:43:28:15:43 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:33 0/0:0:0:0:0:55:0%:99:1E0:40:55:29:26:56 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:56:0%:99:1E0:41:56:29:27:58 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:48 0/0:0:0:0:0:54:0%:99:1E0:41:54:31:23:56 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:26 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:45 0/0:0:0:0:0:64:0%:99:1E0:39:64:37:27:66 0/0:0:0:0:0:47:0%:89:1E0:41:47:28:19:47 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:49 0/0:0:0:0:0:41:0%:78:1E0:45:41:27:14:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:46 0/0:0:0:0:0:63:0%:99:1E0:41:63:33:30:63 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:46 MTB_anc 8322 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|gyrA_Rv0006|gene5|transcript|Transcript_gene5|Coding|1/1|c.1021T>G|p.Phe341Val|1021/2517|1021/2517|341/838||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.8322T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.8322T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|moxifloxacin_gatifloxacin_ofloxacin_levofloxacin|||n.8322T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:0:0:0:0:50:0%:92:1E0:46:50:26:24:51 0/0:0:0:0:0:43:0%:82:1E0:46:43:28:15:43 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:23 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:46:0%:85:1E0:47:46:23:23:46 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:23 0/0:0:0:0:0:41:0%:78:1E0:49:41:22:19:42 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:39 0/0:0:0:0:0:61:0%:99:1E0:44:61:31:30:62 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:24 0/0:0:0:0:0:68:0%:99:1E0:48:68:32:36:69 0/0:0:0:0:0:31:0%:59:1E0:44:31:24:7:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:16:0%:29:1E0:52:16:7:9:16 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:66:0%:99:1E0:41:66:44:22:66 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:26 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:37 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:52:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:37 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:55:0%:99:1E0:51:55:27:28:56 0/0:0:0:0:0:54:0%:99:1E0:45:54:28:26:55 0/0:0:0:0:0:55:0%:99:1E0:46:55:29:26:57 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:19 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:28:14:42 0/0:0:0:0:0:50:0%:92:1E0:44:50:28:22:50 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:22:0%:40:1E0:47:22:16:6:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:24:13:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:18:10:30 0/0:0:0:0:0:45:0%:85:1E0:46:45:20:25:45 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:44 0/0:0:0:0:0:51:0%:97:1E0:50:51:30:21:51 0/0:0:0:0:0:40:0%:74:1E0:46:40:25:15:40 0/0:0:0:0:0:46:0%:85:1E0:44:46:25:21:46 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:13:22:35 0/0:0:0:0:0:46:0%:85:1E0:47:46:21:25:46 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:28 0/0:0:0:0:0:36:0%:66:1E0:48:36:23:13:38 0/0:0:0:0:0:10:0%:17:1E0:50:10:6:4:10 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:40 0/0:0:0:0:0:29:0%:55:1E0:52:29:15:14:30 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:39:0%:74:1E0:50:39:24:15:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:35:0%:67:1E0:49:35:19:16:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:38 0/1:43:18:13:5:29:62.07%:71:7.6888E-8:47:11:6:5:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:43 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:26:0%:47:1E0:50:26:9:17:27 0/0:0:0:0:0:37:0%:70:1E0:48:37:21:16:37 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:56:0%:99:1E0:41:56:32:24:56 0/0:32:1:0:1:31:3.23%:48:5E-1:43:30:13:17:32 0/0:0:0:0:0:48:0%:89:1E0:43:48:22:26:50 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:45 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:45:0%:85:1E0:44:45:27:18:48 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:37 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:53:0%:99:1E0:47:53:33:20:53 0/0:0:0:0:0:50:0%:92:1E0:44:50:29:21:51 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:41 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:48 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:51 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:37 0/0:0:0:0:0:57:0%:99:1E0:42:57:32:25:57 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:37 0/0:0:0:0:0:40:0%:74:1E0:47:40:16:24:43 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:55:0%:99:1E0:42:55:21:34:55 0/0:0:0:0:0:57:0%:99:1E0:43:57:31:26:57 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:44 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:44 0/0:0:0:0:0:62:0%:99:1E0:42:62:36:26:63 0/0:0:0:0:0:36:0%:66:1E0:41:36:24:12:38 0/0:0:0:0:0:46:0%:85:1E0:44:46:28:18:46 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:35 0/0:0:0:0:0:53:0%:99:1E0:41:53:36:17:53 0/0:0:0:0:0:45:0%:85:1E0:43:45:28:17:46 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:42 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:28:11:39 0/0:0:0:0:0:61:0%:99:1E0:39:61:30:31:61 0/0:0:0:0:0:50:0%:92:1E0:46:50:29:21:51 0/0:0:0:0:0:49:0%:93:1E0:46:49:19:30:50 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:38 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:39:0%:74:1E0:47:39:13:26:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:56:0%:99:1E0:46:56:27:29:57 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:47 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:43 MTB_anc 9143 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|gyrA_Rv0006|gene5|transcript|Transcript_gene5|Coding|1/1|c.1842C>T|p.Ile614Ile|1842/2517|1842/2517|614/838||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.9143C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.9143C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|moxifloxacin_gatifloxacin_ofloxacin_levofloxacin|||n.9143C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:52:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:52:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:39:28:11:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:53:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:53:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:38:20:18:39:97.44%:99:1.4508E-22:0:0:0:0:41 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:38:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:63 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 9755 . C CGCCGAAGAAAGT . PASS AC=42;AF=0.140;AN=300;ANN=CGCCGAAGAAAGT|disruptive_inframe_insertion|MODERATE|gyrA_Rv0006|gene5|transcript|Transcript_gene5|Coding|1/1|c.2456_2467dupCCGAAGAAAGTG|p.Ala819_Ser822dup|2468/2517|2468/2517|823/838||INFO_REALIGN_3_PRIME,CGCCGAAGAAAGT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.9755_9756insGCCGAAGAAAGT||||||,CGCCGAAGAAAGT|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.9755_9756insGCCGAAGAAAGT||||||,CGCCGAAGAAAGT|custom|MODIFIER|||CUSTOM&additionnal_annotations|moxifloxacin_gatifloxacin_ofloxacin_levofloxacin|||n.9755_9756insGCCGAAGAAAGT||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:46 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:23 0/0:0:0:0:0:61:0%:99:1E0:44:61:34:27:61 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:31 0/1:43:11:7:4:15:73.33%:46:2.4988E-5:41:4:2:2:15 0/1:46:27:10:17:33:81.82%:99:4.5192E-13:42:6:3:3:33 0/0:0:0:0:0:42:0%:77:1E0:48:42:21:21:42 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:49:35:15:20:35 0/1:48:32:13:19:37:86.49%:99:4.8717E-16:50:5:2:3:37 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:49 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:26 0/0:0:0:0:0:52:0%:96:1E0:42:52:25:27:52 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:25 0/1:51:17:9:8:19:89.47%:82:5.9414E-9:45:2:1:1:19 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:64:0%:99:1E0:41:64:33:31:67 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:42 0/1:43:18:6:12:22:81.82%:81:7.1052E-9:48:4:1:3:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/1:48:15:10:5:20:75%:64:3.8543E-7:50:5:4:1:20 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/1:47:27:14:13:31:87.1%:99:1.125E-13:36:4:2:2:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:34 0/0:33:1:0:1:38:2.63%:58:5E-1:48:37:20:17:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:41:0%:78:1E0:45:41:14:27:43 0/0:0:0:0:0:68:0%:99:1E0:44:68:31:37:69 0/0:0:0:0:0:54:0%:99:1E0:43:54:26:28:54 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:36:0%:66:1E0:49:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/1:43:25:14:11:28:89.29%:99:5.8768E-13:45:3:2:1:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:51:0%:97:1E0:47:51:35:16:52 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:20:0%:36:1E0:46:20:6:14:20 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:59:0%:99:1E0:45:59:30:29:59 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:44 0/0:0:0:0:0:21:0%:40:1E0:39:21:15:6:21 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/1:43:28:13:15:32:87.5%:99:3.2142E-14:36:4:1:3:32 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 1/1:46:27:12:15:29:93.1%:99:1.5465E-14:38:2:0:2:29 0/1:45:35:22:13:42:83.33%:99:5.1164E-17:36:7:3:4:42 1/1:45:53:22:31:58:91.38%:99:3.3697E-28:42:4:3:1:59 0/1:47:23:11:12:28:82.14%:99:3.103E-11:40:5:1:4:28 0/1:43:37:21:16:44:84.09%:99:2.1068E-18:40:6:3:3:44 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:26 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:47 0/1:53:27:12:15:34:79.41%:99:7.9014E-13:46:7:2:5:34 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:19 0/1:50:26:10:16:30:86.67%:99:3.9214E-13:40:4:1:3:31 1/1:41:37:22:15:41:90.24%:99:3.5075E-19:36:4:1:3:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/1:43:32:19:13:40:78.05%:99:1.9666E-15:32:7:6:1:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:21:8:29 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:33:0%:63:1E0:49:33:14:19:33 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/1:54:23:9:14:34:67.65%:94:3.5675E-10:43:11:3:8:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:30 0/0:0:0:0:0:65:0%:99:1E0:40:65:24:41:65 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:24 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:56 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:38 0/1:41:28:17:11:32:87.5%:99:3.2142E-14:35:4:2:2:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/1:42:30:14:16:35:85.71%:99:5.8653E-15:39:5:3:2:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:33 0/0:0:0:0:0:39:0%:74:1E0:47:39:23:16:39 0/0:34:1:0:1:35:2.86%:55:5E-1:39:34:17:17:37 0/0:0:0:0:0:56:0%:99:1E0:38:56:23:33:57 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 1/1:41:51:21:30:55:91.07%:99:1.5231E-26:34:5:1:4:56 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:35 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:46 0/1:42:30:14:16:35:85.71%:99:5.8653E-15:48:5:3:2:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/1:36:36:12:24:39:81.82%:99:2.867E-17:32:8:3:5:44 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:36 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:45 0/0:0:0:0:0:43:0%:82:1E0:37:43:22:21:46 0/0:0:0:0:0:47:0%:89:1E0:39:47:22:25:48 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:36 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:47 0/0:0:0:0:0:35:0%:67:1E0:40:35:11:24:36 0/1:41:49:27:22:58:84.48%:99:6.9624E-24:34:9:2:7:58 0/0:0:0:0:0:40:0%:74:1E0:38:40:21:19:43 1/1:41:31:15:16:34:91.18%:99:2.7308E-16:34:3:2:1:34 1/1:42:25:9:16:26:96.15%:99:5.4444E-14:38:1:0:1:26 0/1:44:26:14:12:30:86.67%:99:3.9214E-13:35:4:2:2:30 0/0:0:0:0:0:63:0%:99:1E0:39:63:23:40:66 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:38 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:38 1/1:40:39:19:20:40:92.86%:99:8.4519E-21:42:3:1:2:42 0/1:44:27:14:13:32:84.38%:99:2.3785E-13:35:5:1:4:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:29 0/1:44:40:18:22:45:88.89%:99:2.0407E-20:36:5:2:3:45 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/1:42:30:18:12:40:75%:99:9.555E-14:37:10:5:5:40 0/1:41:39:24:15:46:82.98%:99:7.4895E-19:42:8:6:2:47 0/0:0:0:0:0:58:0%:99:1E0:41:58:27:31:59 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:31 MTB_anc 11370 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|alaT_Rvnt02-Rv0008c_Rv0008c|gene8-gene9|intergenic_region|gene8-gene9|||n.11370C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:52:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:53:36:17:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:10:16:27:96.3%:99:1.4382E-14:37:1:0:1:27 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:54:41:13:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:39:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:41:32:9:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:53:41:12:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:38:29:9:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:61:38:23:61:100%:99:2.609E-36:0:0:0:0:61 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:37:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:49:35:14:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:37:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:35:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:42:31:11:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:37:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:35:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:40:25:15:41:97.56%:99:9.8874E-23:77:1:1:0:44 1/1:36:53:42:11:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:60:36:24:60:100%:99:1.035E-35:0:0:0:0:63 1/1:37:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 13460 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0010c_Rv0010c|gene11|transcript|Transcript_gene11|Coding|1/1|c.99C>T|p.Asp33Asp|99/426|99/426|33/141||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.13460G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.13460G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:52:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:52:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:53:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:70:29:41:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:45:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:76:29:47:76:100%:99:2.711E-45:0:0:0:0:77 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:54:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:50:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:49:19:30:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:49:18:31:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:47:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 14401 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0012_Rv0012|gene13|transcript|Transcript_gene13|Coding|1/1|c.313G>A|p.Glu105Lys|313/789|313/789|105/262||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.14401G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.14401G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:29 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:28 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:49 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:42 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:47 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:35 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:40:30:15:15:31:96.77%:99:8.4556E-18:0:0:0:0:33 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:42 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:52 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:49 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:41:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:56 1/1:40:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:61 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:46 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:38:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:51 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:29 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:40:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:48 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:58 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:33:15:18:34:97.06%:99:1.3852E-19:0:0:0:0:36 1/1:38:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:65:25:40:65:100%:99:1.0519E-38:0:0:0:0:70 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:40:30:10:20:31:96.77%:99:6.8754E-17:34:1:1:0:34 1/1:41:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:51 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:33 1/1:37:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:15 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:48 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:37:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:45 1/1:36:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:37:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:37:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:58 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:38:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:45 1/1:39:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:53 1/1:37:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:36:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:32 1/1:37:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:41 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:36:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:53 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:33 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:36 1/1:38:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:49:26:23:50:98%:99:5.0549E-28:31:1:1:0:53 1/1:37:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:35 MTB_anc 15117 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|trpG_Rv0013|gene14|transcript|Transcript_gene14|Coding|1/1|c.204G>C|p.Met68Ile|204/699|204/699|68/232||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.15117G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.15117G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:64:35:29:65:98.46%:99:4.1752E-38:0:0:0:0:65 1/1:50:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:28:21:7:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:31:19:12:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:54:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:48:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:22:12:10:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:30:17:13:31:96.77%:99:6.8754E-17:37:1:0:1:32 1/1:44:34:16:18:35:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:49:26:23:50:98%:99:3.925E-29:0:0:0:0:50 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 20375 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|rodA_Rv0017c|gene18|transcript|Transcript_gene18|Coding|1/1|c.1266C>T|p.Tyr422Tyr|1266/1410|1266/1410|422/469||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.20375G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.20375G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.20375G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:52 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:31 0/0:0:0:0:0:61:0%:99:1E0:43:61:25:36:62 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:38 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:27:0%:52:1E0:44:27:8:19:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:9:29:40 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:18 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:49 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:9:23:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:7:23:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:31 0/0:0:0:0:0:56:0%:99:1E0:40:56:23:33:58 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:15:0%:29:1E0:42:15:6:9:15 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:41 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:12:28:41 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:37 0/0:0:0:0:0:64:0%:99:1E0:45:64:28:36:64 0/0:0:0:0:0:55:0%:99:1E0:43:55:26:29:57 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:33:0%:63:1E0:39:33:12:21:34 0/0:0:0:0:0:45:0%:85:1E0:46:45:21:24:46 0/0:0:0:0:0:48:0%:89:1E0:49:48:16:32:48 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:15 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:44 0/0:0:0:0:0:23:0%:44:1E0:45:23:7:16:23 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:48 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:38 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:12:24:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:36 0/0:0:0:0:0:48:0%:89:1E0:42:48:19:29:49 0/0:0:0:0:0:32:0%:59:1E0:50:32:16:16:32 0/0:0:0:0:0:60:0%:99:1E0:43:60:23:37:61 0/0:0:0:0:0:68:0%:99:1E0:44:68:26:42:69 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:43 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:52:1:1:0:22:4.55%:31:5E-1:45:21:9:12:23 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:21 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:9:21:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:30:0%:55:1E0:47:30:10:20:31 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:54:0%:99:1E0:42:54:20:34:55 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:40 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:53:0%:99:1E0:39:53:21:32:54 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:41:0%:78:1E0:43:41:15:26:42 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:44 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:38 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:32 0/0:0:0:0:0:48:0%:89:1E0:43:48:19:29:50 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 0/0:0:0:0:0:56:0%:99:1E0:41:56:20:36:57 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:35 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:70:0%:99:1E0:42:70:38:32:70 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:27 0/0:0:0:0:0:54:0%:99:1E0:40:54:28:26:55 0/0:0:0:0:0:48:0%:89:1E0:40:48:27:21:49 0/0:0:0:0:0:44:0%:81:1E0:39:44:19:25:44 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:42 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:45 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:45 0/0:0:0:0:0:47:0%:89:1E0:39:47:22:25:47 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:49:0%:93:1E0:39:49:24:25:51 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:37 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:60:0%:99:1E0:38:60:27:33:61 0/0:0:0:0:0:44:0%:81:1E0:40:44:17:27:44 0/0:0:0:0:0:59:0%:99:1E0:39:59:32:27:60 0/0:0:0:0:0:49:0%:93:1E0:42:49:14:35:50 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:47:0%:89:1E0:40:47:15:32:48 0/0:0:0:0:0:44:0%:81:1E0:40:44:18:26:44 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:38:1:1:0:49:2.04%:80:5E-1:41:48:20:28:50 0/0:0:0:0:0:63:0%:99:1E0:44:63:25:38:64 0/0:0:0:0:0:59:0%:99:1E0:40:59:24:35:59 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:40 MTB_anc 21819 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|pstP_Rv0018c|gene19|transcript|Transcript_gene19|Coding|1/1|c.1363G>T|p.Ala455Ser|1363/1545|1363/1545|455/514||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.21819C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.21819C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.21819C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:46:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:23:2:21:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:43:15:28:44:97.73%:99:1.7144E-24:37:1:1:0:45 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:24:15:9:25:96%:99:2.0568E-13:33:1:0:1:26 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:34:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 22398 . T G . PASS AC=14;AF=0.047;AN=300;ANN=G|missense_variant|MODERATE|pstP_Rv0018c|gene19|transcript|Transcript_gene19|Coding|1/1|c.784A>C|p.Thr262Pro|784/1545|784/1545|262/514||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.22398T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.22398T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.22398T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:43 0/0:0:0:0:0:15:0%:29:1E0:50:15:10:5:16 0/0:0:0:0:0:50:0%:92:1E0:42:50:30:20:50 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:25 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:28 0/0:0:0:0:0:26:0%:47:1E0:50:26:11:15:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:23 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:35 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:19 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:56 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:25 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:27 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:29 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:32 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:49 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:29 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:32 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:24 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:41 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:0:0:0:0:63:0%:99:1E0:43:63:29:34:64 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:39 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:37 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:18 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:36 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:48 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:36 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:20 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:21 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:15:0%:29:1E0:42:15:4:11:18 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:53 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:44:0%:81:1E0:45:44:27:17:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:39 0/0:0:0:0:0:21:0%:40:1E0:42:21:6:15:21 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:0:0:0:0:49:0%:93:1E0:44:49:32:17:51 0/0:0:0:0:0:31:0%:59:1E0:43:31:21:10:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:41 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:22 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:13:0%:25:1E0:51:13:6:7:14 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:30 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:20 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:26 0/0:0:0:0:0:52:0%:96:1E0:42:52:25:27:55 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:30 0/0:0:0:0:0:19:0%:37:1E0:46:19:14:5:21 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:30 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:22 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:53 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:25 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:31 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:20:9:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:40 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:18 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:10:24:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:19 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:24:0%:44:1E0:37:24:14:10:27 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:42 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:41 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:25 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:61 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:46 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:29 0/0:0:0:0:0:34:0%:62:1E0:36:34:18:16:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:35 0/0:0:0:0:0:37:0%:70:1E0:38:37:11:26:42 0/0:0:0:0:0:31:0%:59:1E0:36:31:13:18:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:35 0/0:0:0:0:0:43:0%:82:1E0:38:43:20:23:45 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:28 0/0:0:0:0:0:29:0%:55:1E0:35:29:13:16:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:8:18:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:26 0/0:0:0:0:0:31:0%:59:1E0:38:31:20:11:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:36 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:39 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:37 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:21 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:34 0/0:0:0:0:0:42:0%:77:1E0:38:42:22:20:44 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:36 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:46 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:51 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:40 MTB_anc 23174 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|pstP_Rv0018c|gene19|transcript|Transcript_gene19|Coding|1/1|c.8T>G|p.Leu3Arg|8/1545|8/1545|3/514||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.23174A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.23174A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.23174A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:49:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:52:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:53:24:12:12:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:23:11:35:97.14%:99:3.2089E-19:60:1:0:1:35 1/1:47:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:52:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:50:37:13:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:39:18:21:40:97.5%:99:3.8137E-22:37:1:0:1:41 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:32:20:12:34:94.12%:99:2.2142E-17:48:2:1:1:34 1/1:47:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:24:11:13:25:96%:99:2.0568E-13:37:1:0:1:27 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:25:14:11:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:73:31:42:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:44:27:15:12:28:96.43%:99:3.7915E-15:50:1:0:1:29 1/1:43:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:60:27:33:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 MTB_anc 23791 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|intergenic_region|MODIFIER|fhaB_Rv0019c-fhaA_Rv0020c|gene20-gene21|intergenic_region|gene20-gene21|||n.23791G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:46:0%:85:1E0:48:46:26:20:46 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:33:0%:63:1E0:50:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:48:37:25:12:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:38:0%:70:1E0:51:38:20:18:38 0/0:0:0:0:0:37:0%:70:1E0:50:37:21:16:37 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:43 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:53:0%:99:1E0:44:53:20:33:53 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:9:16:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:26 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:53:0%:99:1E0:44:53:31:22:53 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:47:0%:89:1E0:48:47:20:27:48 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:17 0/0:60:1:1:0:36:2.78%:55:5E-1:47:35:18:17:36 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:60:1:0:1:34:2.94%:51:5E-1:43:33:12:21:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:46:0%:85:1E0:52:46:21:25:46 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:31:0%:59:1E0:48:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:45:0%:85:1E0:45:45:27:18:45 0/0:0:0:0:0:66:0%:99:1E0:51:66:44:22:66 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:31 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:45 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:55:0%:99:1E0:42:55:27:28:57 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:44 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:51:0%:97:1E0:45:51:30:21:51 0/0:0:0:0:0:13:0%:25:1E0:48:13:8:5:13 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:49:0%:93:1E0:43:49:20:29:49 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:43:0%:82:1E0:42:43:16:27:44 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:50:0%:92:1E0:50:50:26:24:50 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:48 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:52:0%:96:1E0:45:52:27:25:53 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:38 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:18:0%:32:1E0:50:18:7:11:19 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:8:21:30 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:32:0%:59:1E0:48:32:11:21:33 0/0:0:0:0:0:40:0%:74:1E0:47:40:15:25:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:36:0%:66:1E0:51:36:19:17:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:21:7:28 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:42 0/0:0:0:0:0:37:0%:70:1E0:49:37:26:11:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:38 0/0:0:0:0:0:16:0%:29:1E0:41:16:7:9:16 0/0:0:0:0:0:40:0%:74:1E0:49:40:13:27:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:51:0%:97:1E0:40:51:22:29:51 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:39:1:1:0:53:1.89%:88:5E-1:45:52:25:27:54 0/0:0:0:0:0:25:0%:48:1E0:42:25:7:18:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:37:0%:70:1E0:47:37:13:24:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:37:1:0:1:39:2.56%:62:5E-1:47:38:13:25:40 1/1:50:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:24 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:48 0/0:0:0:0:0:46:0%:85:1E0:41:46:28:18:48 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:45 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:45 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:59:0%:99:1E0:44:59:28:31:59 0/0:0:0:0:0:62:0%:99:1E0:41:62:28:34:62 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:49 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:61:0%:99:1E0:42:61:30:31:62 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:54 0/0:0:0:0:0:39:0%:74:1E0:39:39:17:22:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:42 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:34 0/0:0:0:0:0:49:0%:93:1E0:40:49:27:22:49 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:43 0/0:0:0:0:0:49:0%:93:1E0:42:49:15:34:52 0/0:0:0:0:0:33:0%:63:1E0:40:33:24:9:33 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:41 0/0:0:0:0:0:63:0%:99:1E0:41:63:27:36:67 0/0:0:0:0:0:42:0%:77:1E0:46:42:26:16:42 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:52:0%:96:1E0:41:52:28:24:52 0/0:0:0:0:0:66:0%:99:1E0:42:66:38:28:68 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:35 0/0:39:1:1:0:28:3.57%:41:5E-1:43:27:15:12:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:48 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:44 MTB_anc 24698 . GCCGCGTTGCTCGGGGTAA G . PASS AC=183;AF=0.610;AN=300;ANN=G|disruptive_inframe_deletion|MODERATE|fhaA_Rv0020c|gene21|transcript|Transcript_gene21|Coding|1/1|c.729_746delTTACCCCGAGCAACGCGG|p.Tyr244_Gly249del|746/1584|729/1584|243/527||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.24699_24716delCCGCGTTGCTCGGGGTAA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.24699_24716delCCGCGTTGCTCGGGGTAA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.24699_24716delCCGCGTTGCTCGGGGTAA||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:30:22:8:36:83.33%:99:1.1855E-14:37:6:1:5:37 0/1:50:11:4:7:14:78.57%:47:1.6951E-5:37:3:0:3:16 0/1:43:35:20:15:44:79.55%:99:1.6883E-16:42:9:4:5:44 0/1:47:18:11:7:20:85.71%:84:3.7603E-9:37:3:2:1:21 0/1:38:15:7:8:22:68.18%:61:7.4178E-7:39:7:5:2:22 0/1:36:21:11:10:22:87.5%:99:9.0704E-11:36:3:1:2:25 0/1:49:23:10:13:27:85.19%:99:1.6161E-11:48:4:1:3:27 0/1:43:17:10:7:20:85%:78:1.2848E-8:35:3:2:1:20 0/1:45:15:10:5:21:71.43%:62:5.4994E-7:40:6:2:4:21 0/1:47:32:13:19:37:86.49%:99:4.8717E-16:44:5:2:3:37 0/1:44:18:12:6:23:78.26%:79:1.1937E-8:49:5:3:2:23 1/1:44:37:20:17:39:94.87%:99:3.0128E-20:37:2:1:1:39 0/1:44:6:5:1:11:54.55%:22:6.192E-3:51:5:3:2:11 0/1:47:29:12:17:33:87.88%:99:9.1482E-15:48:4:2:2:34 0/1:41:27:14:13:31:84.38%:99:2.3785E-13:37:5:2:3:32 0/1:40:27:13:14:32:81.82%:99:2.3785E-13:46:5:3:2:33 1/1:44:21:11:10:22:95.45%:99:1.0931E-11:34:1:0:1:22 0/1:44:19:11:8:23:82.61%:86:2.1316E-9:41:4:3:1:23 0/1:40:22:12:10:28:78.57%:97:1.7583E-10:39:6:4:2:28 1/1:44:18:8:10:20:90%:87:1.6758E-9:60:2:1:1:20 0/1:42:27:16:11:35:77.14%:99:1.2926E-12:36:8:4:4:36 0/1:47:54:29:25:62:87.1%:99:6.2075E-27:39:8:3:5:62 1/1:45:23:13:10:24:95.83%:99:7.7525E-13:60:1:0:1:24 0/1:47:22:11:11:28:78.57%:97:1.7583E-10:40:6:4:2:28 0/1:43:34:12:22:37:89.47%:99:1.6239E-17:35:4:2:2:38 0/1:50:12:8:4:14:85.71%:55:2.9913E-6:36:2:1:1:14 0/1:40:26:12:14:28:89.66%:99:1.6496E-13:36:3:1:2:29 1/1:48:20:12:8:21:95.24%:99:4.0873E-11:38:1:0:1:21 0/1:44:23:16:7:29:79.31%:99:5.3984E-11:39:6:2:4:29 1/1:46:23:11:12:24:95.83%:99:7.7525E-13:38:1:0:1:24 0/1:44:33:18:15:39:84.62%:99:2.9926E-16:44:6:1:5:39 1/1:47:35:13:22:38:92.11%:99:1.5466E-18:45:3:1:2:38 0/1:44:21:14:7:24:87.5%:99:9.0704E-11:36:3:1:2:24 0/1:43:26:11:15:37:70.27%:99:1.294E-11:40:11:7:4:37 0/1:44:21:10:11:25:80.77%:94:3.4262E-10:51:5:3:2:26 0/1:43:23:13:10:29:79.31%:99:5.3984E-11:44:6:2:4:29 0/1:43:18:9:9:27:66.67%:73:4.8354E-8:43:9:5:4:27 0/1:48:49:27:22:58:84.48%:99:6.9624E-24:36:9:2:7:58 0/1:46:40:20:20:46:85.11%:99:4.9559E-20:44:6:2:4:46 0/1:43:42:28:14:47:87.5%:99:4.0135E-21:44:6:3:3:48 0/1:40:26:14:12:31:83.87%:99:8.0999E-13:40:5:3:2:31 0/1:45:21:10:11:24:87.5%:99:9.0704E-11:43:3:0:3:24 0/1:41:17:8:9:23:73.91%:72:5.7694E-8:45:6:3:3:23 0/1:41:20:13:7:23:83.33%:91:6.3493E-10:36:4:3:1:25 0/1:45:30:14:16:37:81.08%:99:2.1946E-14:42:7:3:4:37 0/1:45:33:19:14:41:80.49%:99:1.0617E-15:37:8:2:6:41 0/1:45:35:16:19:39:89.74%:99:4.5343E-18:36:4:2:2:39 0/1:40:37:20:17:43:84.09%:99:4.4107E-18:41:7:5:2:46 0/1:45:34:16:18:41:82.93%:99:1.7333E-16:38:7:3:4:41 0/1:45:31:18:13:39:79.49%:99:1.1554E-14:41:8:5:3:39 0/1:52:18:9:9:22:81.82%:81:7.1052E-9:54:4:0:4:22 0/1:43:50:23:27:58:86.21%:99:9.3525E-25:41:8:4:4:58 0/1:44:23:10:13:26:85.19%:99:1.6161E-11:43:4:2:2:27 0/1:43:28:12:16:34:82.35%:99:1.349E-13:41:6:4:2:34 1/1:40:19:11:8:21:90.48%:93:4.7003E-10:35:2:1:1:21 0/1:45:36:18:18:45:80%:99:5.1219E-17:47:9:4:5:46 0/1:40:25:16:9:31:78.12%:99:8.3928E-12:43:7:4:3:32 0/1:45:20:9:11:26:76.92%:87:1.8273E-9:40:6:3:3:26 1/1:48:25:16:9:27:92.59%:99:2.0853E-13:38:2:1:1:28 0/1:48:32:15:17:38:84.21%:99:1.0241E-15:41:6:1:5:38 0/1:45:27:13:14:34:79.41%:99:7.9014E-13:50:7:3:4:34 0/1:43:38:24:14:43:88.37%:99:2.5797E-19:41:5:1:4:43 0/1:42:41:22:19:46:87.23%:99:1.4122E-20:41:6:4:2:48 0/1:44:36:20:16:41:87.8%:99:3.2269E-18:37:5:0:5:41 0/1:46:34:12:22:39:87.18%:99:3.9902E-17:39:5:3:2:39 0/1:44:46:31:15:57:80.7%:99:9.8993E-22:36:11:4:7:59 0/1:41:25:18:7:31:80.65%:99:4.9949E-12:44:6:3:3:31 0/1:45:35:17:18:40:85.37%:99:2.5278E-17:39:6:2:4:42 0/1:44:14:9:5:18:77.78%:60:8.0605E-7:43:4:1:3:18 1/1:43:10:5:5:11:90.91%:47:1.7011E-5:60:1:1:0:11 1/1:45:32:15:17:33:96.97%:99:4.7095E-18:38:1:0:1:33 0/1:48:21:13:8:25:80.77%:94:3.4262E-10:44:5:2:3:26 1/1:53:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:32:12:20:35:91.43%:99:7.5196E-17:60:3:2:1:35 0/1:43:37:22:15:43:86.05%:99:2.1068E-18:35:6:2:4:43 1/1:42:19:9:10:20:90.48%:93:4.7003E-10:34:2:1:1:21 0/1:41:24:15:9:31:75%:99:4.1964E-11:37:8:2:6:32 0/1:46:23:10:13:30:76.67%:99:8.7055E-11:43:7:3:4:30 1/1:41:38:22:16:41:92.68%:99:3.1178E-20:37:3:2:1:41 0/1:43:25:12:13:33:75.76%:99:1.3235E-11:40:8:5:3:33 0/1:48:17:8:9:26:65.38%:68:1.4238E-7:35:9:5:4:26 1/1:40:33:16:17:34:94.29%:99:5.9366E-18:36:2:1:1:35 0/1:41:43:18:25:45:89.58%:99:4.4594E-22:46:5:2:3:48 1/1:48:31:10:21:34:91.18%:99:2.7308E-16:44:3:1:2:34 0/1:44:29:14:15:35:82.86%:99:4.008E-14:35:6:3:3:35 0/1:41:25:14:11:28:86.21%:99:1.3609E-12:34:4:1:3:29 0/1:43:33:20:13:36:89.19%:99:5.7997E-17:37:4:1:3:37 0/1:48:12:9:3:18:66.67%:48:1.4831E-5:37:6:4:2:18 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 0/1:43:21:14:7:24:87.5%:99:9.0704E-11:36:3:1:2:24 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/1:46:21:12:9:25:84%:97:1.8789E-10:51:4:2:2:26 0/1:44:32:20:12:36:88.89%:99:2.0653E-16:36:4:1:3:36 1/1:41:30:16:14:33:90.91%:99:9.89E-16:35:3:2:1:33 0/1:44:40:22:18:45:88.89%:99:2.0407E-20:40:5:2:3:45 0/1:41:19:8:11:23:82.61%:86:2.1316E-9:37:4:3:1:23 0/1:43:24:13:11:27:88.89%:99:2.0853E-12:37:3:3:0:28 0/1:43:25:11:14:30:83.33%:99:2.745E-12:41:5:2:3:30 0/1:45:26:7:19:33:78.79%:99:2.5824E-12:42:7:3:4:33 0/1:43:23:11:12:25:88.46%:99:7.3681E-12:44:3:2:1:26 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 0/1:45:30:13:17:35:85.71%:99:5.8653E-15:36:5:1:4:35 0/1:44:32:18:14:39:82.05%:99:1.9666E-15:34:7:4:3:39 0/1:39:16:11:5:17:88.89%:76:2.0936E-8:38:2:0:2:18 0/1:47:24:9:15:32:75%:99:4.1964E-11:35:8:2:6:32 0/1:46:28:17:11:32:84.85%:99:6.9527E-14:45:5:2:3:33 0/1:43:25:11:14:28:86.21%:99:1.3609E-12:42:4:1:3:29 1/1:40:17:10:7:18:94.44%:86:2.0936E-9:36:1:0:1:18 1/1:45:34:20:14:37:91.89%:99:5.6582E-18:44:3:2:1:37 0/1:42:22:14:8:25:88%:99:2.5916E-11:34:3:0:3:25 0/1:41:25:15:10:31:80.65%:99:4.9949E-12:39:6:1:5:31 0/1:40:18:10:8:22:81.82%:81:7.1052E-9:36:4:2:2:22 0/1:39:20:14:6:25:80%:89:1.1273E-9:39:5:1:4:25 0/1:44:28:18:10:36:77.78%:99:4.0051E-13:34:8:3:5:36 0/1:40:26:15:11:33:78.79%:99:2.5824E-12:36:7:5:2:33 0/1:42:31:17:14:39:79.49%:99:1.1554E-14:35:8:3:5:39 1/1:41:22:18:4:23:91.67%:99:1.0078E-11:34:2:1:1:26 0/1:43:38:23:15:43:88.37%:99:2.5797E-19:40:5:2:3:43 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 0/1:43:42:26:16:46:89.36%:99:1.5987E-21:41:5:3:2:47 1/1:44:48:30:18:52:92.31%:99:2.3201E-25:36:4:2:2:53 0/1:45:25:16:9:28:86.21%:99:1.3609E-12:42:4:1:3:29 1/1:44:19:12:7:20:90.48%:93:4.7003E-10:38:2:1:1:21 0/1:39:39:23:16:49:78%:99:4.144E-18:35:11:2:9:51 0/1:36:19:8:11:23:76%:82:5.8245E-9:35:6:0:6:25 0/1:39:31:13:18:37:86.11%:99:1.6935E-15:33:5:3:2:38 0/1:39:35:21:14:43:81.4%:99:9.5933E-17:34:8:3:5:43 1/1:39:31:20:11:33:93.94%:99:8.2416E-17:37:2:1:1:34 1/1:38:20:7:13:22:90.91%:98:1.3117E-10:35:2:1:1:22 0/1:41:27:16:11:32:84.38%:99:2.3785E-13:37:5:4:1:33 0/1:37:26:17:9:32:81.25%:99:1.5064E-12:34:6:1:5:32 0/1:41:22:10:12:29:75.86%:95:2.7763E-10:36:7:2:5:29 0/1:36:25:11:14:34:73.53%:99:1.9819E-11:39:9:3:6:35 0/1:41:27:12:15:29:87.1%:99:1.125E-13:34:4:2:2:32 1/1:37:19:11:8:21:90.48%:93:4.7003E-10:37:2:1:1:21 0/1:44:25:19:6:29:86.21%:99:1.3609E-12:35:4:1:3:29 0/1:37:60:35:25:67:86.96%:99:7.7195E-30:38:9:6:3:71 0/1:43:36:19:17:43:83.72%:99:7.3092E-18:40:6:3:3:43 0/1:43:34:21:13:40:82.93%:99:1.7333E-16:37:7:1:6:42 1/1:39:48:29:19:49:96%:99:1.3143E-26:36:2:0:2:50 0/1:38:32:17:15:33:88.89%:99:2.0653E-16:42:4:2:2:36 0/1:39:20:11:9:28:71.43%:85:2.7631E-9:35:7:2:5:28 0/1:42:29:16:13:33:87.88%:99:9.1482E-15:35:4:1:3:33 1/1:44:43:25:18:46:91.49%:99:1.5372E-22:37:4:2:2:48 0/1:42:30:13:17:37:81.08%:99:2.1946E-14:35:7:3:4:37 0/1:44:10:6:4:12:83.33%:44:3.3652E-5:35:2:1:1:12 1/1:45:31:14:17:33:93.94%:99:8.2416E-17:35:2:0:2:34 0/1:43:31:22:9:38:79.49%:99:1.1554E-14:35:8:3:5:40 0/1:41:41:24:17:49:82%:99:1.2455E-19:40:9:4:5:50 0/1:39:25:12:13:27:89.29%:99:5.8768E-13:47:3:1:2:28 MTB_anc 27469 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|whiB5_Rv0022c-Rv0023_Rv0023|gene24-gene25|intergenic_region|gene24-gene25|||n.27469G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:49:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:37:20:17:38:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:48:36:12:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:49:32:17:49:100%:99:3.925E-29:0:0:0:0:52 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:60:37:23:60:100%:99:1.035E-35:0:0:0:0:60 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:43:70:40:30:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:53:37:16:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 MTB_anc 29482 . CA C . PASS AC=300;AF=1.00;AN=300;ANN=C|frameshift_variant|HIGH|Rv0025_Rv0025|gene27|transcript|Transcript_gene27|Coding|1/1|c.241delA|p.Thr81fs|241/363|241/363|81/120||INFO_REALIGN_3_PRIME,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.29483delA||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.29483delA||||||;HET=0;HOM=1;LOF=(Rv0025_Rv0025|gene27|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:51:25:26:52:98.08%:99:3.3479E-29:32:1:0:1:52 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:46:24:22:47:97.87%:99:2.9526E-26:60:1:0:1:47 1/1:46:27:18:9:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:44:33:20:13:32:97.06%:99:1.2301E-18:37:1:0:1:35 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:31:12:19:32:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:24:13:11:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:45:49:23:26:50:98%:99:5.0549E-28:34:1:1:0:50 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:24:17:7:26:96%:99:2.0568E-13:34:1:0:1:26 1/1:45:22:12:10:23:95.65%:99:2.9149E-12:33:1:1:0:23 1/1:46:18:9:9:17:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:15:8:7:16:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:50:28:22:51:98.04%:99:1.3013E-28:34:1:0:1:51 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:46:26:20:47:97.87%:99:2.9526E-26:34:1:0:1:47 1/1:41:38:22:16:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:25:10:15:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:30:15:15:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:37:18:19:38:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:44:27:11:16:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:17:22:39:97.5%:99:3.8137E-22:34:1:1:0:40 1/1:51:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:65:29:36:65:98.48%:99:1.7754E-37:60:1:0:1:66 1/1:49:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:60:32:28:60:98.36%:99:1.6176E-34:34:1:0:1:61 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:12:14:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:20:11:9:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:49:39:14:25:39:97.5%:99:3.8137E-22:35:1:1:0:40 1/1:47:37:16:21:38:97.37%:99:5.6582E-21:29:1:1:0:38 1/1:47:29:16:13:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:44:54:32:22:55:98.18%:99:5.6837E-31:32:1:0:1:55 1/1:46:38:21:17:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:38:18:20:42:90.48%:99:9.7197E-20:40:4:3:1:42 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:31:17:14:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:43:41:23:18:40:97.62%:99:2.5612E-23:37:1:1:0:42 1/1:43:29:16:13:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:29:16:46:97.83%:99:1.1441E-25:34:1:1:0:46 1/1:48:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:41:25:16:42:95.35%:99:1.4915E-22:33:2:1:1:43 1/1:41:34:20:14:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:11:16:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:46:19:27:47:97.87%:99:2.9526E-26:32:1:0:1:47 1/1:48:64:32:32:66:95.52%:99:3.6535E-35:33:3:2:1:67 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:26:11:15:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:47:31:9:22:32:96.88%:99:1.8007E-17:37:1:1:0:32 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:27:14:13:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:42:49:23:26:49:98%:99:5.0549E-28:32:1:0:1:50 1/1:47:33:18:15:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:46:29:19:10:30:96.67%:99:2.6212E-16:35:1:0:1:30 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:19:16:36:94.59%:99:4.2437E-19:48:2:2:0:37 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:40:24:16:41:97.56%:99:9.8874E-23:33:1:0:1:41 1/1:44:27:14:13:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:11:15:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:25:14:11:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:48:14:34:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:15:20:36:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:43:38:19:19:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:31:16:15:32:96.88%:99:1.8007E-17:33:1:1:0:32 1/1:42:24:10:14:23:100%:99:3.101E-14:0:0:0:0:24 1/1:41:26:15:11:27:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:11:19:31:96.77%:99:6.8754E-17:32:1:0:1:31 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:15:12:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:40:18:22:40:97.56%:99:9.8874E-23:33:1:1:0:41 1/1:43:30:18:12:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:22:18:41:97.56%:99:9.8874E-23:33:1:1:0:41 1/1:41:54:31:23:55:98.18%:99:5.6837E-31:32:1:0:1:55 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:70:33:37:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:42:62:25:37:63:96.88%:99:8.9557E-35:48:2:1:1:65 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:57:25:32:57:98.28%:99:9.6072E-33:33:1:1:0:59 1/1:43:50:20:30:49:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:47:26:21:47:97.92%:99:7.6145E-27:32:1:0:1:49 1/1:39:38:21:17:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:49:25:24:48:100%:99:3.925E-29:0:0:0:0:49 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:48:27:21:50:96%:99:1.3143E-26:33:2:1:1:50 1/1:39:37:20:17:38:94.87%:99:3.0128E-20:33:2:0:2:39 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:32:18:14:34:94.12%:99:2.2142E-17:33:2:1:1:34 1/1:43:28:17:11:29:96.55%:99:9.9776E-16:32:1:1:0:29 1/1:38:56:24:32:56:98.25%:99:3.7452E-32:37:1:1:0:57 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:12:20:32:96.97%:99:4.7095E-18:33:1:0:1:33 1/1:40:45:21:24:47:95.74%:99:7.2338E-25:35:2:2:0:47 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:14:15:29:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:47:25:22:48:95.92%:99:5.0044E-26:34:2:1:1:49 1/1:43:38:19:19:40:95%:99:8.0088E-21:34:2:2:0:40 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:48:27:21:45:100%:99:1.554E-28:0:0:0:0:48 1/1:40:46:26:20:44:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:35:21:14:34:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 30642 . C T . PASS AC=16;AF=0.053;AN=300;ANN=T|synonymous_variant|LOW|Rv0026_Rv0026|gene28|transcript|Transcript_gene28|Coding|1/1|c.921C>T|p.Phe307Phe|921/1347|921/1347|307/448||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.30642C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.30642C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:45 0/0:0:0:0:0:17:0%:33:1E0:57:17:7:10:18 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:22 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:39 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:22:0%:40:1E0:55:22:12:10:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:57:0%:99:1E0:44:57:30:27:58 0/0:0:0:0:0:16:0%:29:1E0:49:16:7:9:16 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:51 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:35 0/0:0:0:0:0:41:0%:78:1E0:48:41:26:15:41 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:21:0%:40:1E0:51:21:10:11:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:62:0%:99:1E0:41:62:29:33:66 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:60:1:0:1:44:2.27%:69:5E-1:46:43:21:22:45 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:49 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:38 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:39 0/0:0:0:0:0:63:0%:99:1E0:48:63:36:27:63 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:50:0%:92:1E0:45:50:21:29:50 0/0:0:0:0:0:42:0%:77:1E0:39:42:21:21:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:16:4:20 0/0:39:1:0:1:30:3.33%:44:5E-1:45:29:15:14:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:47 0/0:0:0:0:0:42:0%:77:1E0:48:42:23:19:43 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:40 0/0:0:0:0:0:51:0%:97:1E0:41:51:29:22:51 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:23 0/0:0:0:0:0:56:0%:99:1E0:44:56:23:33:56 0/0:0:0:0:0:35:0%:67:1E0:49:35:21:14:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:43 0/0:0:0:0:0:46:0%:85:1E0:45:46:15:31:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:20:7:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:32:0%:59:1E0:47:32:11:21:32 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:41 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:53:0%:99:1E0:47:53:26:27:53 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:43 0/0:0:0:0:0:58:0%:99:1E0:43:58:35:23:59 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:44 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:19:0%:37:1E0:50:19:12:7:19 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:44 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:26 0/0:0:0:0:0:17:0%:33:1E0:47:17:7:10:17 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:50:0%:92:1E0:43:50:26:24:50 0/0:0:0:0:0:38:0%:70:1E0:47:38:26:12:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:37:1:1:0:42:2.38%:66:5E-1:49:41:26:15:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:57:0%:99:1E0:44:57:29:28:58 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:37 0/0:0:0:0:0:17:0%:33:1E0:51:17:9:8:17 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:42 0/0:0:0:0:0:41:0%:78:1E0:45:41:26:15:41 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:35:0%:67:1E0:45:35:24:11:35 0/0:60:1:0:1:25:4%:38:5E-1:48:24:14:10:25 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:38 0/0:0:0:0:0:27:0%:52:1E0:51:27:13:14:27 0/0:0:0:0:0:69:0%:99:1E0:42:69:30:39:70 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:51 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:38:1:0:1:45:2.22%:73:5E-1:49:44:19:25:45 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:59:0%:99:1E0:41:59:26:33:59 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:39:1:1:0:27:3.7%:41:5E-1:45:26:10:16:28 0/0:0:0:0:0:59:0%:99:1E0:44:59:26:33:60 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:48 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:22 0/0:0:0:0:0:50:0%:92:1E0:41:50:24:26:50 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:53:0%:99:1E0:42:53:23:30:54 0/0:0:0:0:0:34:0%:62:1E0:38:34:21:13:36 0/0:0:0:0:0:58:0%:99:1E0:42:58:28:30:59 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:35 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:46 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:33 0/0:0:0:0:0:46:0%:85:1E0:38:46:26:20:46 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:23:7:30 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:47 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:43:0%:82:1E0:46:43:28:15:43 0/0:0:0:0:0:67:0%:99:1E0:40:67:31:36:67 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:31 MTB_anc 30943 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0026_Rv0026|gene28|transcript|Transcript_gene28|Coding|1/1|c.1222C>T|p.Pro408Ser|1222/1347|1222/1347|408/448||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.30943C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.30943C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:48:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:22:15:7:23:95.65%:99:2.9149E-12:33:1:1:0:26 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:33:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:41:25:10:15:26:96.15%:99:5.4444E-14:33:1:0:1:29 1/1:38:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:36:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:28 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:29:13:16:30:96.67%:99:2.6212E-16:37:1:1:0:31 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:62 1/1:37:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:48 1/1:36:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:30 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:36:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:44 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 MTB_anc 31077 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0026_Rv0026-Rv0027_Rv0027|gene28-gene29|intergenic_region|gene28-gene29|||n.31077C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:51:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:51:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:54:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:51:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:34:19:15:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:49:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:32:15:17:33:96.97%:99:4.7095E-18:60:1:0:1:34 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 36470 . GC G . PASS AC=290;AF=0.967;AN=300;ANN=G|frameshift_variant|HIGH|bioF2_Rv0032|gene33|transcript|Transcript_gene33|Coding|1/1|c.2183delC|p.Pro728fs|2183/2316|2183/2316|728/771||INFO_REALIGN_3_PRIME,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.36471delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.36471delC||||||;LOF=(bioF2_Rv0032|gene33|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:35:16:19:35:97.22%:99:8.3613E-20:35:1:0:1:36 1/1:47:15:9:6:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:41:53:24:29:54:98.15%:99:2.2126E-30:33:1:0:1:54 1/1:46:25:7:18:25:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:42:32:14:18:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:17:3:14:18:94.44%:86:2.0936E-9:35:1:1:0:18 1/1:48:32:14:18:33:96.97%:99:4.7095E-18:34:1:0:1:33 0/1:40:28:12:16:32:87.5%:99:1.2857E-14:33:3:0:3:32 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:12:22:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:47:18:29:49:95.92%:99:5.0044E-26:29:2:1:1:49 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:47:11:36:47:95.92%:99:5.0044E-26:47:2:1:1:49 1/1:39:23:13:10:24:92%:99:2.7767E-12:47:2:1:1:25 0/1:39:23:12:11:27:82.14%:99:3.103E-11:39:5:1:4:28 0/1:43:17:8:9:21:80.95%:76:2.3502E-8:46:4:2:2:21 1/1:39:26:8:18:25:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:39:16:7:9:17:94.12%:81:7.7134E-9:34:1:1:0:17 1/1:42:26:12:14:28:92.86%:99:5.6872E-14:36:2:1:1:28 1/1:39:28:13:15:29:96.55%:99:9.9776E-16:35:1:0:1:29 1/1:40:51:14:37:53:96.23%:99:2.3675E-28:46:2:0:2:53 1/1:44:36:12:24:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:27:9:18:28:93.1%:99:1.5465E-14:32:2:0:2:29 1/1:41:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:17:8:9:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:17:9:8:18:94.44%:86:2.0936E-9:34:1:0:1:18 0/1:39:19:8:11:22:86.36%:89:1.0931E-9:42:3:0:3:22 0/1:39:24:13:11:26:88.89%:99:2.0853E-12:44:3:2:1:27 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:34:9:25:33:97.14%:99:3.2089E-19:34:1:1:0:35 1/1:49:29:11:18:32:90.62%:99:3.5714E-15:34:3:3:0:32 1/1:39:26:13:13:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:46:26:13:13:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:38:14:24:38:97.44%:99:1.4697E-21:34:1:1:0:39 1/1:37:32:12:20:31:96.97%:99:4.7095E-18:33:1:0:1:33 1/1:44:50:28:22:52:96.15%:99:1.3013E-28:33:1:1:0:52 1/1:40:29:9:20:29:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:39:49:22:27:50:94.23%:99:1.6572E-26:34:3:1:2:52 1/1:38:31:11:20:32:96.88%:99:1.8007E-17:35:1:0:1:32 1/1:42:33:11:22:35:91.67%:99:2.0653E-17:35:3:1:2:37 1/1:40:28:15:13:30:93.33%:99:4.194E-15:60:2:1:1:30 0/1:37:17:5:12:19:89.47%:86:2.0936E-9:34:1:1:0:19 1/1:41:28:12:16:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:14:15:31:93.55%:99:1.1344E-15:34:2:1:1:31 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:32:17:15:35:91.43%:99:7.5196E-17:33:3:0:3:35 1/1:39:36:18:18:36:94.74%:99:2.1762E-20:34:1:0:1:38 1/1:45:27:11:16:28:93.1%:99:3.7915E-15:33:1:1:0:29 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:3:29:34:94.12%:99:2.2142E-17:46:2:2:0:34 1/1:44:22:15:7:22:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:42:24:13:11:25:92.31%:99:7.6222E-13:33:2:0:2:26 1/1:41:37:14:23:38:97.37%:99:5.6582E-21:32:1:0:1:38 1/1:38:48:15:33:49:96%:99:1.3143E-26:33:2:1:1:50 1/1:38:30:15:15:30:96.77%:99:6.8754E-17:34:1:1:0:31 1/1:42:22:11:11:24:91.67%:99:1.0078E-11:31:2:0:2:24 0/1:40:31:10:21:37:83.78%:99:3.4914E-15:33:6:1:5:38 1/1:43:28:11:17:29:96.55%:99:9.9776E-16:33:1:0:1:29 1/1:39:36:13:23:38:90%:99:1.2627E-18:33:4:2:2:40 1/1:38:40:12:28:39:97.56%:99:9.8874E-23:27:1:1:0:41 0/1:38:27:15:12:31:87.1%:99:4.6134E-14:33:3:1:2:32 1/1:39:21:6:15:23:91.3%:99:3.6437E-11:32:2:1:1:23 1/1:40:37:15:22:38:94.87%:99:5.6582E-21:60:1:0:1:39 1/1:41:61:26:35:64:95.31%:99:3.4466E-34:33:2:1:1:64 1/1:42:31:17:14:32:93.94%:99:8.2416E-17:33:2:1:1:33 1/1:37:34:16:18:32:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:15:6:9:16:93.75%:75:2.8282E-8:35:1:0:1:16 1/1:42:18:4:14:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:30:16:14:30:96.77%:99:6.8754E-17:34:1:0:1:31 0/1:46:22:13:9:26:84.62%:99:5.5261E-11:41:4:1:3:26 1/1:44:19:9:10:20:95%:98:1.5234E-10:34:1:0:1:20 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:41:17:24:39:95.35%:99:1.4915E-22:33:2:1:1:43 1/1:41:23:13:10:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:30:7:23:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:12:17:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:42:23:9:14:24:95.83%:99:7.7525E-13:34:1:1:0:24 1/1:39:26:14:12:26:96.3%:99:1.4382E-14:33:1:0:1:27 0/1:40:29:13:16:34:85.29%:99:2.0235E-14:38:5:3:2:34 1/1:42:48:20:28:52:92.31%:99:2.3201E-25:32:4:2:2:52 1/1:42:33:13:20:34:97.06%:99:1.2301E-18:32:1:1:0:34 1/1:44:32:12:20:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:11:22:36:91.67%:99:2.0653E-17:42:3:2:1:36 1/1:40:22:8:14:23:95.65%:99:2.9149E-12:33:1:1:0:23 1/1:41:23:12:11:24:95.83%:99:7.7525E-13:34:1:1:0:24 1/1:45:10:3:7:11:90.91%:47:1.7011E-5:34:1:0:1:11 1/1:46:29:19:10:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:15:20:35:97.22%:99:8.3613E-20:33:1:0:1:36 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:36:21:9:12:22:91.3%:99:3.6437E-11:33:2:1:1:23 1/1:38:39:19:20:39:97.5%:99:3.8137E-22:34:1:1:0:40 1/1:42:19:8:11:20:95%:98:1.5234E-10:31:1:0:1:20 1/1:39:32:11:21:33:91.43%:99:7.5196E-17:33:3:1:2:35 1/1:41:34:10:24:36:94.44%:99:1.5887E-18:33:2:0:2:36 1/1:40:26:12:14:27:96.3%:99:1.4382E-14:32:1:1:0:27 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:21:12:9:22:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:41:25:11:14:25:92.59%:99:2.0853E-13:47:2:0:2:27 1/1:40:30:11:19:28:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:17:5:12:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:39:19:8:11:19:95%:98:1.5234E-10:34:1:1:0:20 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:8:13:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:19:22:43:95.35%:99:1.4915E-22:33:2:1:1:43 1/1:41:32:12:20:32:96.97%:99:4.7095E-18:32:1:0:1:33 1/1:38:40:11:29:40:97.56%:99:9.8874E-23:60:1:0:1:41 1/1:41:32:13:19:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:34:25:9:16:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:27:11:16:29:93.1%:99:1.5465E-14:46:2:2:0:29 1/1:38:35:12:23:36:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:38:36:13:23:38:92.31%:99:4.2179E-19:32:3:1:2:39 1/1:33:32:14:18:27:96.97%:99:4.7095E-18:35:1:1:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:35:17:18:34:97.22%:99:8.3613E-20:35:1:0:1:36 1/1:39:43:18:25:43:95.56%:99:1.0412E-23:33:2:0:2:45 1/1:38:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:19:7:12:18:95%:98:1.5234E-10:33:1:0:1:20 1/1:37:31:8:23:31:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:36:44:17:27:44:95.65%:99:2.7459E-24:32:2:1:1:46 1/1:36:44:20:24:44:91.67%:99:1.2056E-23:34:3:1:2:48 1/1:37:40:17:23:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:42:13:29:43:95.45%:99:3.9431E-23:32:2:0:2:44 1/1:37:31:11:20:31:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:36:24:9:15:25:96%:99:3.101E-14:0:0:0:0:25 1/1:40:26:12:14:26:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:34:28:12:16:27:93.33%:99:4.194E-15:31:2:0:2:30 1/1:33:26:9:17:21:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:36:14:22:36:94.74%:99:1.1316E-19:34:2:0:2:38 1/1:35:24:7:17:25:92.31%:99:7.6222E-13:34:2:0:2:26 1/1:35:30:10:20:32:93.75%:99:3.0612E-16:33:2:0:2:32 1/1:36:48:25:23:49:96%:99:1.3143E-26:46:2:1:1:50 1/1:43:29:13:16:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:44:22:22:44:97.78%:99:4.4304E-25:33:1:1:0:45 1/1:36:37:14:23:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:24:12:12:23:100%:99:3.101E-14:0:0:0:0:24 1/1:40:24:4:20:23:100%:99:3.101E-14:0:0:0:0:24 1/1:40:28:13:15:30:90.32%:99:1.2857E-14:42:3:2:1:31 1/1:37:20:8:12:22:90.91%:98:1.3117E-10:36:2:2:0:22 1/1:39:33:12:21:34:97.06%:99:1.2301E-18:32:1:0:1:34 1/1:45:21:6:15:22:95.45%:99:1.0931E-11:35:1:0:1:22 1/1:40:28:12:16:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:42:31:12:19:34:91.18%:99:2.7308E-16:33:3:0:3:34 1/1:40:47:18:29:48:94%:99:7.6145E-27:35:1:0:1:51 1/1:38:31:10:21:31:96.88%:99:1.8007E-17:33:1:0:1:32 MTB_anc 36538 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|bioF2_Rv0032|gene33|transcript|Transcript_gene33|Coding|1/1|c.2244C>T|p.Ser748Ser|2244/2316|2244/2316|748/771||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.36538C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.36538C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:50:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:52:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:55:16:39:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:51:13:38:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:48:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:52:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:5:28:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:53:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:35:16:19:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 36593 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|bioF2_Rv0032|gene33|transcript|Transcript_gene33|Coding|1/1|c.2299C>G|p.Gln767Glu|2299/2316|2299/2316|767/771||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.36593C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.36593C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:35:20:15:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:55:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:14:20:35:97.14%:99:3.2089E-19:39:1:0:1:36 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:27:13:14:28:96.43%:99:3.7915E-15:60:1:1:0:29 1/1:50:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:54:15:39:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:50:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:11:22:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:66:36:30:66:100%:99:2.6498E-39:0:0:0:0:69 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:22:7:15:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:11:13:25:96%:99:3.101E-14:0:0:0:0:25 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:40:20:20:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:19:10:9:20:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:32:20:12:33:96.97%:99:4.7095E-18:38:1:1:0:33 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:57:38:19:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:61:23:38:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 39758 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0036c_Rv0036c|gene37|transcript|Transcript_gene37|Coding|1/1|c.72C>T|p.His24His|72/774|72/774|24/257||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.39758G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.39758G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:52:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:49:17:32:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:43:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:38:18:20:39:100%:99:1.4508E-22:0:0:0:0:43 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:28:11:17:29:96.55%:99:9.9776E-16:27:1:1:0:29 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:54:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:65:25:40:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 42281 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0039c_Rv0039c|gene40|transcript|Transcript_gene40|Coding|1/1|c.71T>G|p.Phe24Cys|71/348|71/348|24/115||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.42281A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.42281A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:63:28:35:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:52:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:24:15:40:97.5%:99:3.8137E-22:37:1:0:1:40 1/1:47:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:40:23:17:41:97.56%:99:9.8874E-23:39:1:0:1:43 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 MTB_anc 42401 . G C . PASS AC=14;AF=0.047;AN=300;ANN=C|intergenic_region|MODIFIER|Rv0039c_Rv0039c-mtc28_Rv0040c|gene40-gene41|intergenic_region|gene40-gene41|||n.42401G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:16:0%:29:1E0:46:16:9:7:16 0/0:0:0:0:0:49:0%:93:1E0:44:49:22:27:49 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:26 0/0:0:0:0:0:16:0%:29:1E0:48:16:10:6:16 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:26 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 0/0:0:0:0:0:19:0%:37:1E0:45:19:15:4:19 0/0:0:0:0:0:22:0%:40:1E0:50:22:8:14:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:36 0/0:0:0:0:0:11:0%:22:1E0:47:11:8:3:12 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:45 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:18:8:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:22 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:14 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:57:0%:99:1E0:43:57:25:32:57 0/0:0:0:0:0:16:0%:29:1E0:43:16:9:7:16 0/0:0:0:0:0:39:0%:74:1E0:47:39:23:16:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:17:0%:33:1E0:41:17:12:5:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:8:20:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:42 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:10:24:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:25:11:36 0/0:0:0:0:0:70:0%:99:1E0:44:70:41:29:71 0/0:0:0:0:0:42:0%:77:1E0:47:42:26:16:42 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:43 0/0:0:0:0:0:23:0%:44:1E0:43:23:17:6:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:53:0%:99:1E0:40:53:33:20:54 0/0:0:0:0:0:43:0%:82:1E0:44:43:30:13:43 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:27 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:49 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:21 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:52:0%:96:1E0:44:52:24:28:52 0/0:0:0:0:0:44:0%:81:1E0:41:44:18:26:45 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:44 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:53 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:27:14:41 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:49 0/0:37:1:1:0:31:3.23%:48:5E-1:45:30:15:15:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:26:0%:47:1E0:49:26:17:9:26 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:16 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:36 0/0:0:0:0:0:50:0%:92:1E0:43:50:31:19:52 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:33 0/0:0:0:0:0:55:0%:99:1E0:44:55:32:23:55 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:20:0%:36:1E0:42:20:7:13:20 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:40 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:48:0%:89:1E0:42:48:28:20:49 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:35 0/0:46:1:0:1:53:1.89%:83:5E-1:44:51:30:21:53 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:36 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:31:0%:59:1E0:38:31:22:9:32 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:16:27:43 0/0:38:1:0:1:28:3.57%:41:5E-1:43:27:17:10:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:34 0/0:60:1:1:0:45:2.22%:69:5E-1:41:43:23:20:45 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:43 0/0:0:0:0:0:52:0%:96:1E0:40:52:23:29:54 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:26 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:34 0/0:0:0:0:0:55:0%:99:1E0:43:55:32:23:55 0/0:0:0:0:0:48:0%:89:1E0:43:48:22:26:49 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:43:0%:82:1E0:38:43:25:18:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:37 0/0:0:0:0:0:44:0%:81:1E0:41:44:29:15:45 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:27 0/0:0:0:0:0:44:0%:81:1E0:39:44:24:20:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:39 0/0:0:0:0:0:36:0%:66:1E0:41:36:26:10:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:45:0%:85:1E0:40:45:29:16:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:59:0%:99:1E0:38:59:36:23:62 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:46 0/0:37:1:1:0:27:3.7%:41:5E-1:38:26:14:12:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:25 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:42 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:33 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:48 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:43 MTB_anc 43945 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|leuS_Rv0041|gene42|transcript|Transcript_gene42|Coding|1/1|c.384G>A|p.Val128Val|384/2910|384/2910|128/969||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.43945G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.43945G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:60:31:29:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:52:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:54:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:61:39:22:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:53:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:63:31:32:63:100%:99:1.657E-37:0:0:0:0:63 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 46594 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv0042c_Rv0042c|gene43|transcript|Transcript_gene43|Coding|1/1|c.614G>A|p.Arg205His|614/627|614/627|205/208||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.46594C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.46594C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:42:46:19:27:46 0/0:0:0:0:0:15:0%:29:1E0:50:15:7:8:16 0/0:0:0:0:0:47:0%:89:1E0:44:47:29:18:47 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:25 0/0:0:0:0:0:20:0%:36:1E0:40:20:5:15:21 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:46 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:16:0%:29:1E0:50:16:5:11:17 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:49 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:18 0/0:0:0:0:0:21:0%:40:1E0:48:21:15:6:21 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:23 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:57:0%:99:1E0:46:57:31:26:57 0/0:0:0:0:0:52:0%:96:1E0:44:52:30:22:52 0/0:0:0:0:0:42:0%:77:1E0:45:42:19:23:42 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:47 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:20 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:39 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:49 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:21 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:24 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 0/0:0:0:0:0:45:0%:85:1E0:42:45:29:16:46 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:44 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:15 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:38 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:47 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:42 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:50:33:14:19:35 0/0:0:0:0:0:18:0%:32:1E0:46:18:7:11:18 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:33 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:23 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:20 0/0:0:0:0:0:46:0%:85:1E0:46:46:19:27:47 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:37:1:0:1:37:2.7%:59:5E-1:46:36:14:22:37 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:46 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:28:0%:51:1E0:38:28:7:21:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:9:21:31 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:20 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:49 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:38 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:42 0/0:0:0:0:0:44:0%:81:1E0:37:44:23:21:44 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:20 0/0:0:0:0:0:46:0%:85:1E0:39:46:22:24:46 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 0/0:0:0:0:0:27:0%:52:1E0:38:27:17:10:28 0/0:39:1:1:0:51:1.96%:84:5E-1:41:50:24:26:53 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:30 0/0:0:0:0:0:40:0%:74:1E0:37:40:13:27:41 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:37:0%:70:1E0:38:37:16:21:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:40 0/0:0:0:0:0:37:0%:70:1E0:38:37:22:15:39 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:54:0%:99:1E0:39:54:26:28:54 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:44 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:49 0/0:0:0:0:0:42:0%:77:1E0:38:42:18:24:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:18 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:39:1:0:1:27:3.7%:41:5E-1:42:26:10:16:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:38 MTB_anc 48957 . TG T . PASS AC=16;AF=0.053;AN=300;ANN=T|frameshift_variant|HIGH|Rv0044c_Rv0044c|gene45|transcript|Transcript_gene45|Coding|1/1|c.70delC|p.His24fs|70/795|70/795|24/264||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.48958delG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.48958delG||||||;HET=0;LOF=(Rv0044c_Rv0044c|gene45|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:50 0/0:0:0:0:0:21:0%:40:1E0:49:21:6:15:21 0/0:0:0:0:0:46:0%:85:1E0:46:46:25:21:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:11:19:33 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:60:1:0:1:34:2.94%:51:5E-1:42:33:17:16:36 0/0:0:0:0:0:32:0%:59:1E0:50:32:16:16:34 0/0:0:0:0:0:27:0%:52:1E0:52:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:24:6:32 0/0:0:0:0:0:24:0%:44:1E0:52:24:11:13:25 0/0:0:0:0:0:60:0%:99:1E0:42:60:28:32:60 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:16 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:31 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:41 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:0:0:0:0:53:0%:99:1E0:46:53:29:24:54 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:22 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:20 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:50 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:50:0%:92:1E0:45:50:22:28:52 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:19 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:47 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:42 0/0:0:0:0:0:20:0%:36:1E0:48:20:13:7:21 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:19:0%:37:1E0:44:19:15:4:19 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:49:2:1:1:27:7.41%:34:2.4528E-1:46:25:15:10:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:48 0/0:0:0:0:0:20:0%:36:1E0:48:20:7:13:21 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:42 0/0:37:1:1:0:65:1.54%:99:5E-1:44:64:33:31:66 0/0:0:0:0:0:20:0%:36:1E0:44:20:6:14:20 0/0:0:0:0:0:38:0%:70:1E0:46:38:27:11:39 0/0:0:0:0:0:13:0%:25:1E0:51:13:8:5:13 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:19 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:39 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:39 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:10:25:36 0/0:0:0:0:0:36:0%:66:1E0:51:36:15:21:36 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:8:16:26 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:35 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:29 0/0:0:0:0:0:26:0%:47:1E0:48:26:17:9:26 0/0:0:0:0:0:26:0%:47:1E0:53:26:12:14:26 0/0:33:1:0:1:57:1.75%:95:5E-1:42:56:28:28:58 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:38:1:0:1:37:2.7%:59:5E-1:43:36:21:15:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:21 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:18:14:34:94.12%:99:2.2142E-17:33:2:1:1:34 1/1:45:29:17:12:28:96.67%:99:2.6212E-16:35:1:0:1:30 1/1:47:22:11:11:23:95.65%:99:2.9149E-12:34:1:0:1:23 0/0:0:0:0:0:29:0%:55:1E0:37:29:12:17:30 1/1:43:38:20:18:39:97.44%:99:1.4697E-21:34:1:1:0:39 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:43 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:48 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:39 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:32 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:54:0%:99:1E0:43:54:22:32:54 1/1:43:26:15:11:28:92.86%:99:5.6872E-14:46:2:1:1:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:33 0/0:0:0:0:0:56:0%:99:1E0:39:56:25:31:58 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:44 0/0:0:0:0:0:44:0%:81:1E0:41:44:18:26:44 0/0:0:0:0:0:41:0%:78:1E0:37:41:15:26:42 0/0:0:0:0:0:47:0%:89:1E0:38:47:21:26:47 1/1:40:45:16:29:47:93.75%:99:3.2362E-24:33:3:1:2:48 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:30:14:45 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:44 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:60:0%:99:1E0:39:60:30:30:62 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:38 0/0:0:0:0:0:24:0%:44:1E0:44:24:5:19:24 0/0:0:0:0:0:36:0%:66:1E0:40:36:27:9:37 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:39 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:43 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 MTB_anc 51954 . T A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0048c_Rv0048c|gene49|transcript|Transcript_gene49|Coding|1/1|c.744A>T|p.Glu248Asp|744/870|744/870|248/289||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.51954T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.51954T>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:59:23:36:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:29:12:17:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:72:38:34:73:98.63%:99:1.2584E-41:33:1:1:0:74 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:46:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:34:18:16:35:97.14%:99:3.2089E-19:60:1:0:1:36 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:65:38:27:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:44:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:39:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:61:30:31:61:100%:99:2.609E-36:0:0:0:0:63 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 MTB_anc 52474 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv0048c_Rv0048c|gene49|transcript|Transcript_gene49|Coding|1/1|c.224C>G|p.Ala75Gly|224/870|224/870|75/289||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.52474G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.52474G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:43:55:34:21:56 0/0:0:0:0:0:23:0%:44:1E0:52:23:8:15:23 0/0:0:0:0:0:51:0%:97:1E0:46:51:21:30:51 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:24 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:51:35:19:16:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:41:0%:78:1E0:49:41:21:20:41 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:49 0/0:0:0:0:0:18:0%:32:1E0:52:18:11:7:18 0/0:0:0:0:0:50:0%:92:1E0:47:50:23:27:52 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:34 0/0:0:0:0:0:43:0%:82:1E0:46:43:16:27:47 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:37 0/0:0:0:0:0:22:0%:40:1E0:52:22:12:10:23 0/0:30:1:0:1:30:3.33%:44:5E-1:42:29:14:15:30 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:21:10:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:24:11:35 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:57:0%:99:1E0:47:57:25:32:57 0/0:38:1:1:0:40:2.5%:62:5E-1:45:39:15:24:40 0/0:0:0:0:0:50:0%:92:1E0:47:50:29:21:50 0/0:0:0:0:0:44:0%:81:1E0:43:44:27:17:44 0/0:0:0:0:0:46:0%:85:1E0:45:46:26:20:46 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:25 0/0:38:1:0:1:34:2.94%:51:5E-1:43:33:21:12:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:24:11:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:42 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:33 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:50:0%:92:1E0:45:50:22:28:50 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:42 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:25 0/0:0:0:0:0:55:0%:99:1E0:44:55:35:20:56 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:44 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:49:39:24:15:39 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:45 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:24 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:36:1:1:0:68:1.47%:99:5E-1:48:67:39:28:68 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:42:0%:77:1E0:48:42:18:24:42 0/0:20:1:1:0:21:4.76%:31:5E-1:50:20:10:10:21 0/0:0:0:0:0:27:0%:52:1E0:55:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:48:36:15:21:36 0/0:0:0:0:0:29:0%:55:1E0:51:29:16:13:29 0/0:0:0:0:0:15:0%:29:1E0:49:15:8:7:15 0/0:0:0:0:0:37:0%:70:1E0:46:37:24:13:37 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:50 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:19 0/0:0:0:0:0:47:0%:89:1E0:47:47:32:15:49 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:54 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:39:1:1:0:32:3.12%:48:5E-1:49:31:19:12:32 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:21 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:47:0%:89:1E0:45:47:29:18:48 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:47 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:54:0%:99:1E0:46:54:30:24:55 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:45:0%:85:1E0:47:45:28:17:45 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:21 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:37 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:45 0/0:0:0:0:0:48:0%:89:1E0:40:48:29:19:49 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:35 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:47 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:23 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:49 0/0:0:0:0:0:54:0%:99:1E0:44:54:34:20:54 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:43 0/0:0:0:0:0:44:0%:81:1E0:41:44:17:27:47 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:49 0/0:38:1:0:1:48:2.08%:76:5E-1:38:47:22:25:50 0/0:0:0:0:0:61:0%:99:1E0:41:61:31:30:62 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:45 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:28:15:43 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:39 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:36 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:46 0/0:49:1:1:0:59:1.69%:98:5E-1:39:58:25:33:60 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:41 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:44 MTB_anc 55533 . T TGCC . PASS AC=165;AF=0.550;AN=300;ANN=TGCC|inframe_insertion|MODERATE|ponA1_Rv0050|gene51|transcript|Transcript_gene51|Coding|1/1|c.1888_1890dupCCG|p.Pro630dup|1891/2037|1891/2037|631/678||INFO_REALIGN_3_PRIME,TGCC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.55533_55534insGCC||||||,TGCC|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.55533_55534insGCC||||||,TGCC|custom|MODIFIER|||CUSTOM&additionnal_annotations|rifampicin_rifabutin_beta-lactams|||n.55533_55534insGCC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:35:17:18:41:83.33%:99:5.1164E-17:33:7:6:1:43 0/1:49:21:12:9:24:87.5%:99:9.0704E-11:42:3:2:1:24 0/1:43:31:15:16:39:75.61%:99:3.008E-14:44:10:6:4:41 0/1:43:25:9:16:28:89.29%:99:5.8768E-13:38:3:3:0:28 0/1:42:24:12:12:28:82.76%:99:9.2544E-12:32:5:5:0:29 0/1:41:19:7:12:29:65.52%:76:2.1144E-8:38:10:5:5:29 0/1:45:27:12:15:32:84.38%:99:2.3785E-13:39:5:3:2:32 0/1:44:14:8:6:17:82.35%:63:4.8851E-7:36:3:3:0:17 0/1:44:23:14:9:31:71.88%:98:1.3219E-10:39:8:7:1:33 0/1:50:19:9:10:22:86.36%:93:4.7003E-10:46:2:2:0:22 0/1:44:27:14:13:34:77.14%:99:7.9014E-13:39:7:6:1:35 0/1:41:42:19:23:49:84%:99:1.8999E-20:32:8:5:3:50 0/1:54:16:7:9:22:72.73%:67:1.7905E-7:45:6:2:4:22 0/1:38:37:13:24:43:82.22%:99:8.5365E-18:34:8:5:3:46 0/1:39:20:10:10:25:80%:89:1.1273E-9:34:5:5:0:25 0/1:43:19:8:11:26:73.08%:80:8.6144E-9:38:7:6:1:26 0/1:37:14:4:10:18:77.78%:60:8.0605E-7:30:4:3:1:18 1/1:39:21:10:11:23:91.3%:99:3.6437E-11:34:2:2:0:23 0/1:40:13:10:3:15:86.67%:60:8.7675E-7:47:2:2:0:15 0/1:42:16:7:9:19:80%:71:7.7086E-8:42:4:2:2:20 0/1:42:20:13:7:23:86.96%:95:3.1579E-10:34:3:2:1:23 0/1:39:37:14:23:43:82.22%:99:8.5365E-18:34:8:6:2:45 0/1:49:17:9:8:21:80.95%:82:5.9414E-9:47:2:1:1:21 0/1:43:31:22:9:37:83.78%:99:3.4914E-15:40:6:5:1:37 0/1:39:29:12:17:36:80.56%:99:7.2821E-14:34:7:5:2:36 0/1:46:22:9:13:27:78.57%:97:1.7583E-10:48:6:4:2:28 0/1:42:18:9:9:21:85.71%:84:3.7603E-9:43:3:1:2:21 1/1:38:16:7:9:16:94.12%:81:7.7134E-9:60:1:1:0:17 0/1:37:17:8:9:20:85%:78:1.2848E-8:35:3:2:1:20 0/1:37:20:10:10:23:83.33%:91:6.3493E-10:41:4:3:1:24 0/1:38:24:9:15:27:82.76%:99:9.2544E-12:35:5:3:2:29 0/1:40:25:12:13:31:78.12%:99:8.3928E-12:37:7:2:5:32 0/1:45:21:11:10:25:84%:97:1.8789E-10:33:4:3:1:27 1/1:42:20:10:10:21:95.24%:99:4.0873E-11:60:1:1:0:22 0/1:45:22:13:9:27:78.57%:99:1.0343E-10:35:5:2:3:29 0/1:41:30:15:15:35:85.71%:99:5.8653E-15:37:5:4:1:35 0/1:42:24:10:14:33:72.73%:99:6.1763E-11:33:9:6:3:33 0/1:44:34:13:21:45:73.91%:99:2.1709E-15:40:12:8:4:46 0/1:42:21:10:11:25:84%:97:1.8789E-10:42:4:3:1:25 1/1:41:37:25:12:39:94.87%:99:3.0128E-20:32:2:2:0:39 0/1:41:19:7:12:22:86.36%:89:1.0931E-9:32:3:3:0:22 0/1:44:37:17:20:43:86.05%:99:2.1068E-18:43:6:4:2:44 0/1:40:15:9:6:18:83.33%:68:1.4655E-7:32:3:3:0:18 0/1:39:22:11:11:23:84.62%:99:5.5261E-11:39:4:4:0:26 0/1:42:22:12:10:31:70.97%:92:5.875E-10:38:9:5:4:31 0/1:40:23:11:12:29:76.67%:99:5.3984E-11:32:6:3:3:32 0/1:42:27:15:12:35:77.14%:99:7.9014E-13:38:7:4:3:35 0/1:39:26:16:10:39:65%:99:2.3331E-11:35:13:11:2:40 0/1:40:35:15:20:39:89.74%:99:4.5343E-18:37:4:1:3:39 0/1:41:38:20:18:42:88.37%:99:2.5797E-19:38:5:4:1:43 0/1:49:19:10:9:21:86.36%:89:1.0931E-9:44:3:1:2:22 0/1:39:30:16:14:40:73.17%:99:1.422E-13:36:11:7:4:41 0/1:46:21:7:14:25:84%:97:1.8789E-10:42:4:2:2:25 0/1:40:22:10:12:27:78.57%:99:1.0343E-10:34:5:4:1:28 0/1:39:24:10:14:29:82.76%:99:9.2544E-12:35:5:5:0:29 0/1:42:30:13:17:41:73.17%:99:1.422E-13:36:11:7:4:41 0/1:36:34:18:16:39:85%:99:8.7127E-17:33:6:4:2:41 0/1:40:23:10:13:29:79.31%:99:5.3984E-11:35:6:4:2:29 0/1:46:31:20:11:41:75.61%:99:3.008E-14:37:10:8:2:42 1/1:43:30:11:19:32:90.91%:99:9.89E-16:52:3:1:2:33 0/1:41:30:15:15:31:85.71%:99:5.8653E-15:40:5:5:0:36 0/1:40:28:16:12:35:77.78%:99:4.0051E-13:38:8:6:2:38 1/1:42:34:24:10:37:91.89%:99:5.6582E-18:35:3:3:0:38 0/1:42:20:6:14:25:76.92%:87:1.8273E-9:35:6:4:2:26 0/1:39:28:10:18:33:84.85%:99:6.9527E-14:34:5:4:1:34 0/1:42:50:20:30:57:84.75%:99:2.0233E-24:39:9:6:3:59 1/1:47:22:10:12:24:91.67%:99:1.0078E-11:36:2:1:1:24 0/1:40:32:17:15:39:82.05%:99:1.0241E-15:40:6:2:4:39 0/1:47:12:4:8:14:85.71%:55:2.9913E-6:35:2:2:0:15 0/1:45:8:4:4:9:88.89%:36:2.0568E-4:30:1:0:1:9 1/1:43:25:16:9:27:92.59%:99:2.0853E-13:35:2:0:2:27 0/1:47:19:8:11:23:82.61%:89:1.0931E-9:44:3:3:0:23 0/1:43:7:4:3:11:63.64%:27:1.935E-3:35:4:3:1:12 0/1:51:20:10:10:24:80%:89:1.1273E-9:46:5:2:3:25 0/1:39:21:11:10:28:75%:90:8.7917E-10:35:7:4:3:29 0/1:43:18:9:9:24:75%:77:1.8413E-8:33:6:5:1:24 0/1:42:34:20:14:36:89.47%:99:1.6239E-17:38:4:1:3:38 0/1:42:18:8:10:22:81.82%:81:7.1052E-9:46:4:1:3:22 0/1:39:25:14:11:33:75.76%:99:1.3235E-11:35:8:6:2:33 0/1:40:25:10:15:29:83.33%:99:2.745E-12:39:5:4:1:30 0/1:41:23:11:12:25:88.46%:99:7.3681E-12:43:3:2:1:27 0/1:40:27:10:17:32:84.38%:99:2.3785E-13:45:5:2:3:32 0/1:39:33:11:22:38:86.84%:99:1.3966E-16:38:5:4:1:38 0/1:46:15:10:5:17:88.24%:71:7.3277E-8:34:2:1:1:18 0/1:39:14:7:7:19:73.68%:59:1.2025E-6:34:5:4:1:19 0/1:40:22:11:11:26:84.62%:99:5.5261E-11:36:4:3:1:26 0/1:38:25:13:12:33:75.76%:99:8.3928E-12:36:7:5:2:33 0/1:46:15:6:9:18:83.33%:68:1.4655E-7:45:3:2:1:18 0/1:41:24:11:13:31:77.42%:99:2.7115E-11:41:7:2:5:31 0/1:42:19:11:8:26:73.08%:80:8.6144E-9:48:7:3:4:26 1/1:42:24:8:16:26:92.31%:99:7.6222E-13:36:2:1:1:26 0/1:50:15:7:8:18:83.33%:68:1.4655E-7:33:3:3:0:18 0/1:38:43:27:16:51:82.69%:99:1.0955E-20:37:9:5:4:53 1/1:41:22:8:14:23:91.67%:99:1.0078E-11:35:2:1:1:24 0/1:39:30:13:17:39:76.92%:99:6.162E-14:39:9:6:3:41 0/1:43:19:8:11:22:86.36%:89:1.0931E-9:35:3:3:0:22 0/1:38:24:9:15:27:85.71%:99:2.0853E-12:30:3:2:1:28 1/1:42:28:15:13:29:90.32%:99:4.194E-15:31:2:1:1:30 0/1:38:27:15:12:31:81.82%:99:4.5192E-13:37:6:4:2:33 0/1:39:37:19:18:41:86.05%:99:2.1068E-18:34:6:4:2:43 0/1:42:19:10:9:21:86.36%:89:1.0931E-9:32:3:3:0:22 0/1:36:24:10:14:31:72.73%:99:6.1763E-11:37:9:5:4:33 0/1:36:24:10:14:29:82.76%:99:9.2544E-12:32:5:3:2:29 0/1:37:22:10:12:31:70.97%:92:5.875E-10:35:9:5:4:32 0/1:39:18:7:11:23:75%:77:1.8413E-8:35:6:4:2:24 1/1:45:29:14:15:32:90.62%:99:3.5714E-15:35:3:1:2:32 0/1:41:24:15:9:26:88.89%:99:2.0853E-12:35:3:2:1:27 0/1:45:29:16:13:33:87.88%:99:9.1482E-15:35:4:3:1:33 0/1:40:35:17:18:41:79.55%:99:1.6883E-16:42:9:7:2:45 0/1:42:25:13:12:30:83.33%:99:2.745E-12:35:5:3:2:30 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 0/1:37:24:10:14:27:85.71%:99:4.7015E-12:43:4:1:3:29 0/1:36:19:8:11:21:82.61%:86:2.1316E-9:35:4:3:1:24 0/1:43:27:14:13:36:75%:99:2.0026E-12:39:9:9:0:36 0/1:40:31:21:10:37:81.58%:99:6.5838E-15:32:7:3:4:39 0/1:38:40:18:22:45:86.96%:99:4.9559E-20:33:6:3:3:47 0/1:36:24:11:13:30:80%:99:1.647E-11:32:6:4:2:30 0/1:38:23:6:17:28:82.14%:99:3.103E-11:32:5:2:3:28 0/1:38:23:12:11:31:74.19%:98:1.3219E-10:31:8:6:2:32 0/1:39:38:18:20:47:79.17%:99:8.1086E-18:35:10:6:4:48 0/1:41:37:17:20:50:72.55%:99:1.5263E-16:33:14:9:5:52 0/1:40:14:8:6:15:87.5%:65:2.5454E-7:32:2:2:0:17 0/1:43:23:11:12:28:82.14%:99:3.103E-11:35:5:4:1:29 0/1:37:30:15:15:43:68.18%:99:3.8642E-13:33:14:8:6:44 0/1:36:18:12:6:23:75%:77:1.8413E-8:34:6:6:0:27 0/1:37:36:12:24:45:78.26%:99:8.6678E-17:37:10:5:5:46 0/1:39:20:11:9:23:86.96%:95:3.1579E-10:34:3:1:2:23 0/1:40:25:13:12:34:71.43%:99:2.8437E-11:40:10:4:6:36 0/1:37:30:19:11:36:83.33%:99:1.1855E-14:35:6:2:4:36 0/1:35:30:11:19:34:83.33%:99:1.1855E-14:34:6:2:4:36 0/1:36:21:11:10:29:70%:87:1.7919E-9:34:9:8:1:30 0/1:38:24:11:13:33:70.59%:99:8.7205E-11:35:10:7:3:34 0/1:39:21:12:9:25:80.77%:94:3.4262E-10:40:5:4:1:26 0/1:38:29:10:19:32:85.29%:99:2.0235E-14:40:5:3:2:34 0/1:37:22:7:15:29:75.86%:97:1.7583E-10:33:6:4:2:30 0/1:37:25:12:13:33:73.53%:99:1.9819E-11:34:9:8:1:34 0/1:35:33:21:12:41:78.57%:99:1.8121E-15:37:9:7:2:42 0/1:41:32:13:19:40:80%:99:3.51E-15:36:8:3:5:40 1/1:38:38:17:21:40:92.68%:99:3.1178E-20:36:3:2:1:41 0/1:40:32:18:14:35:88.89%:99:2.0653E-16:34:4:3:1:36 0/1:37:25:9:16:32:78.12%:99:8.3928E-12:31:7:7:0:32 0/1:41:33:15:18:37:89.19%:99:5.7997E-17:42:4:3:1:37 0/1:40:27:14:13:33:79.41%:99:7.9014E-13:34:7:2:5:35 0/1:41:29:15:14:34:85.29%:99:2.0235E-14:35:5:5:0:34 0/1:40:30:16:14:37:81.08%:99:2.1946E-14:35:7:3:4:37 0/1:38:20:10:10:24:83.33%:91:6.3493E-10:41:4:3:1:24 0/1:41:27:16:11:30:87.1%:99:1.125E-13:32:4:1:3:31 0/1:40:34:17:17:47:72.34%:99:2.1709E-15:34:12:8:4:47 1/1:41:52:25:27:57:91.23%:99:4.1785E-27:33:5:3:2:57 0/1:38:30:16:14:40:73.17%:99:9.555E-14:34:10:7:3:41 MTB_anc 56330 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv0051_Rv0051|gene52|transcript|Transcript_gene52|Coding|1/1|c.635C>T|p.Thr212Ile|635/1683|635/1683|212/560||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.56330C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.56330C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:45 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:53:0%:99:1E0:46:53:29:24:53 0/0:0:0:0:0:39:0%:74:1E0:47:39:19:20:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:24:8:32 0/0:0:0:0:0:36:0%:66:1E0:50:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:46:32:22:10:32 0/0:0:0:0:0:28:0%:51:1E0:50:28:18:10:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:45 0/0:0:0:0:0:14:0%:25:1E0:46:14:7:7:14 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:49 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:23 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:15 0/0:0:0:0:0:38:0%:70:1E0:46:38:27:11:39 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:43 0/0:0:0:0:0:33:0%:63:1E0:47:33:22:11:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:16:0%:29:1E0:49:16:8:8:16 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:27 0/0:0:0:0:0:44:0%:81:1E0:47:44:17:27:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:55:0%:99:1E0:45:55:35:20:55 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:39 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:17:5:23 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:44 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:50 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:40 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:25 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:35 0/0:0:0:0:0:50:0%:92:1E0:43:50:23:27:53 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:44 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:34 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:38 0/0:0:0:0:0:34:0%:62:1E0:51:34:20:14:35 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:39 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:54:0%:99:1E0:43:54:30:24:55 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:50:39:21:18:39 0/0:0:0:0:0:54:0%:99:1E0:45:54:24:30:55 0/0:0:0:0:0:29:0%:55:1E0:49:29:20:9:31 0/1:42:7:6:1:38:18.42%:22:5.7727E-3:45:31:13:18:38 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:23 0/0:0:0:0:0:16:0%:29:1E0:48:16:9:7:16 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:28:0%:51:1E0:51:28:15:13:28 0/0:0:0:0:0:16:0%:29:1E0:52:16:9:7:16 0/0:0:0:0:0:38:0%:70:1E0:51:38:16:22:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:0:0:0:0:52:0%:96:1E0:42:52:33:19:54 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:42 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:8:17:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:22:0%:40:1E0:54:22:9:13:22 0/0:0:0:0:0:63:0%:99:1E0:42:63:21:42:63 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:34 0/0:0:0:0:0:52:0%:96:1E0:44:52:28:24:54 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:20 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:34 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:37 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:35:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:41 0/0:0:0:0:0:48:0%:89:1E0:45:48:25:23:48 0/0:0:0:0:0:17:0%:33:1E0:44:17:12:5:17 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:48 0/0:0:0:0:0:41:0%:78:1E0:37:41:18:23:42 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:39 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:50 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:66:0%:99:1E0:41:66:29:37:66 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:44 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:54:0%:99:1E0:39:54:30:24:57 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:40 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:41 0/0:0:0:0:0:31:0%:59:1E0:38:31:21:10:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:42:0%:77:1E0:37:42:26:16:42 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:41 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:55:0%:99:1E0:39:55:32:23:58 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:49 0/0:37:1:1:0:36:2.78%:55:5E-1:42:35:20:15:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:42 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:40 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:47:0%:89:1E0:41:47:28:19:47 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:28:18:46 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 MTB_anc 57257 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv0051_Rv0051|gene52|transcript|Transcript_gene52|Coding|1/1|c.1562C>T|p.Ala521Val|1562/1683|1562/1683|521/560||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.57257C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.57257C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:37:37:13:24:37 0/0:0:0:0:0:16:0%:29:1E0:39:16:2:14:16 0/0:0:0:0:0:50:0%:92:1E0:39:50:22:28:50 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:16 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:19 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:28 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:20 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:17 0/0:0:0:0:0:42:0%:77:1E0:36:42:21:21:44 0/0:0:0:0:0:13:0%:25:1E0:46:13:5:8:13 0/0:0:0:0:0:31:0%:59:1E0:35:31:10:21:32 0/0:0:0:0:0:21:0%:40:1E0:35:21:10:11:21 0/0:0:0:0:0:28:0%:51:1E0:36:28:8:20:29 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:16 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:8 0/0:0:0:0:0:8:0%:14:1E0:40:8:5:3:8 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:19 0/0:0:0:0:0:39:0%:74:1E0:36:39:17:22:42 0/0:0:0:0:0:24:0%:44:1E0:38:24:15:9:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:36:26:9:17:26 0/0:0:0:0:0:21:0%:40:1E0:37:21:17:4:22 0/0:0:0:0:0:18:0%:32:1E0:35:18:7:11:20 0/0:0:0:0:0:18:0%:32:1E0:45:18:6:12:18 0/0:0:0:0:0:19:0%:37:1E0:39:19:6:13:20 0/0:0:0:0:0:28:0%:51:1E0:36:28:11:17:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 0/0:0:0:0:0:27:0%:52:1E0:36:27:11:16:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:37:33:18:15:34 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:29 0/0:0:0:0:0:31:0%:59:1E0:36:31:13:18:31 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:20 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:8:22:31 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:36:32:9:23:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:13:22:36 0/0:0:0:0:0:35:0%:67:1E0:37:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:38:35:13:22:35 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:19 0/0:0:0:0:0:27:0%:52:1E0:36:27:16:11:28 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:16 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:20 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:28 0/0:0:0:0:0:51:0%:97:1E0:36:51:32:19:51 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:31 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:23 0/0:0:0:0:0:17:0%:33:1E0:39:17:4:13:17 0/0:0:0:0:0:33:0%:63:1E0:37:33:14:19:33 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:26 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:24 0/0:0:0:0:0:43:0%:82:1E0:39:43:15:28:43 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:21 0/1:35:10:5:5:34:29.41%:33:4.51E-4:37:24:8:16:34 0/0:0:0:0:0:14:0%:25:1E0:40:14:5:9:14 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:20 0/0:38:1:0:1:26:3.85%:38:5E-1:39:25:9:16:26 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:27 0/0:0:0:0:0:13:0%:25:1E0:39:13:4:9:13 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:28 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:34:0%:62:1E0:37:34:18:16:34 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:23 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:35 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:31 0/0:0:0:0:0:27:0%:52:1E0:36:27:11:16:28 0/0:0:0:0:0:24:0%:44:1E0:35:24:9:15:25 0/0:0:0:0:0:30:0%:55:1E0:37:30:10:20:30 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:30 0/0:0:0:0:0:14:0%:25:1E0:39:14:8:6:15 0/0:0:0:0:0:25:0%:48:1E0:35:25:11:14:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:20 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:38:26:7:19:26 0/0:0:0:0:0:34:0%:62:1E0:36:34:13:21:34 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:21 0/0:0:0:0:0:25:0%:48:1E0:35:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:36:29:15:14:29 0/0:0:0:0:0:16:0%:29:1E0:35:16:7:9:17 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:37 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:28 0/0:0:0:0:0:15:0%:29:1E0:36:15:8:7:16 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:14 0/0:0:0:0:0:33:0%:63:1E0:36:33:11:22:34 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:27:0%:52:1E0:36:27:8:19:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:34 0/0:0:0:0:0:23:0%:44:1E0:39:23:6:17:24 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:25 0/0:0:0:0:0:27:0%:52:1E0:34:27:9:18:28 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:36 0/0:0:0:0:0:29:0%:55:1E0:35:29:10:19:29 0/0:0:0:0:0:27:0%:52:1E0:35:27:12:15:30 0/0:0:0:0:0:10:0%:17:1E0:32:10:3:7:10 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:26 0/0:0:0:0:0:21:0%:40:1E0:35:21:7:14:22 0/0:0:0:0:0:43:0%:82:1E0:36:43:16:27:43 0/0:0:0:0:0:40:0%:74:1E0:38:40:15:25:41 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:30 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:34:0%:62:1E0:35:34:16:18:35 0/0:0:0:0:0:21:0%:40:1E0:34:21:7:14:21 0/0:0:0:0:0:23:0%:44:1E0:35:23:9:14:25 0/0:0:0:0:0:22:0%:40:1E0:35:22:8:14:24 0/0:0:0:0:0:25:0%:48:1E0:36:25:8:17:27 0/0:0:0:0:0:34:0%:62:1E0:34:34:10:24:36 0/0:0:0:0:0:30:0%:55:1E0:36:30:7:23:30 0/0:0:0:0:0:18:0%:32:1E0:35:18:7:11:19 0/0:0:0:0:0:25:0%:48:1E0:35:25:13:12:25 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:18 0/0:0:0:0:0:23:0%:44:1E0:35:23:10:13:27 0/0:0:0:0:0:22:0%:40:1E0:33:22:6:16:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:25:0%:48:1E0:36:25:5:20:25 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:29 0/0:0:0:0:0:26:0%:47:1E0:36:26:5:21:26 0/0:0:0:0:0:30:0%:55:1E0:36:30:14:16:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:7:23:30 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:36:26:7:19:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:15 0/0:0:0:0:0:24:0%:44:1E0:36:24:9:15:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:42:0%:77:1E0:36:42:14:28:42 0/0:0:0:0:0:19:0%:37:1E0:37:19:5:14:20 MTB_anc 57393 . A T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0051_Rv0051-Rv0052_Rv0052|gene52-gene53|intergenic_region|gene52-gene53|||n.57393A>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:44:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:19:10:9:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:44:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:35:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:37:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:30:10:20:31:96.77%:99:6.8754E-17:38:1:1:0:31 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 MTB_anc 57399 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|intergenic_region|MODIFIER|Rv0051_Rv0051-Rv0052_Rv0052|gene52-gene53|intergenic_region|gene52-gene53|||n.57399T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:38 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:44 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:29 0/0:60:1:1:0:17:5.88%:24:5E-1:42:16:10:6:19 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:30 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:24 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:44 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:11 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:38 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:9:24:35 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:19 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:45 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:30 0/0:0:0:0:0:22:0%:40:1E0:43:22:16:6:23 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:26 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:9:25:34 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:42 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:41 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:21 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:43 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:31 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:43:0%:82:1E0:38:43:21:22:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:14:27:42 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:17 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:29 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:17 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:7:19:26 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:50 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:24 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:7:17:24 0/0:0:0:0:0:46:0%:85:1E0:42:46:19:27:46 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:45 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:12:22:35 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:12:27:42 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:19 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:33 0/0:0:0:0:0:18:0%:32:1E0:46:18:4:14:18 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:13:0%:25:1E0:46:13:2:11:14 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:28 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:17 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:10:0%:17:1E0:43:10:3:7:10 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:29 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:45 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:30 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:25 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:36 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:26 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:31 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:18 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:16 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:10:23:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:28 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:27:0%:52:1E0:36:27:14:13:30 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:35 0/0:0:0:0:0:19:0%:37:1E0:35:19:6:13:22 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:30 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:27 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:50 0/0:0:0:0:0:47:0%:89:1E0:39:47:18:29:49 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:36:31:16:15:34 0/0:0:0:0:0:34:0%:62:1E0:36:34:21:13:37 0/0:0:0:0:0:28:0%:51:1E0:36:28:16:12:30 0/0:0:0:0:0:34:0%:62:1E0:37:34:18:16:37 0/0:0:0:0:0:31:0%:59:1E0:36:31:15:16:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:6:21:33 0/0:0:0:0:0:36:0%:66:1E0:37:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:37 0/0:0:0:0:0:34:0%:62:1E0:36:34:23:11:34 0/0:0:0:0:0:20:0%:36:1E0:35:20:6:14:23 0/0:0:0:0:0:30:0%:55:1E0:36:30:16:14:30 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:18 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:37 0/0:0:0:0:0:35:0%:67:1E0:37:35:17:18:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:36 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:45 0/0:0:0:0:0:28:0%:51:1E0:42:28:8:20:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:6:17:23 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:40 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:37 0/0:0:0:0:0:50:0%:92:1E0:37:50:21:29:53 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:21 MTB_anc 59118 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|intergenic_region|MODIFIER|ssb_Rv0054-rpsR1_Rv0055|gene55-gene56|intergenic_region|gene55-gene56|||n.59118A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:66:0%:99:1E0:41:66:16:50:66 0/0:0:0:0:0:16:0%:29:1E0:40:16:5:11:16 0/0:0:0:0:0:50:0%:92:1E0:41:50:15:35:50 0/0:0:0:0:0:17:0%:33:1E0:45:17:5:12:17 1/1:42:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:7:18:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:7:16:23 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:22 0/0:0:0:0:0:49:0%:93:1E0:41:49:16:33:50 0/0:0:0:0:0:17:0%:33:1E0:49:17:11:6:18 0/0:0:0:0:0:46:0%:85:1E0:42:46:15:31:46 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:32 0/0:0:0:0:0:17:0%:33:1E0:42:17:6:11:20 0/0:0:0:0:0:19:0%:37:1E0:41:19:6:13:19 0/0:0:0:0:0:16:0%:29:1E0:44:16:4:12:17 0/0:0:0:0:0:23:0%:44:1E0:40:23:4:19:24 0/0:0:0:0:0:46:0%:85:1E0:42:46:15:31:47 0/0:0:0:0:0:22:0%:40:1E0:46:22:6:16:22 0/0:0:0:0:0:35:0%:67:1E0:41:35:8:27:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:23 0/0:0:0:0:0:41:0%:78:1E0:40:41:12:29:42 0/0:0:0:0:0:21:0%:40:1E0:44:21:6:15:21 0/0:0:0:0:0:34:0%:62:1E0:44:34:8:26:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:6:29:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:8:21:30 0/0:0:0:0:0:16:0%:29:1E0:41:16:5:11:16 0/0:0:0:0:0:37:0%:70:1E0:40:37:10:27:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:6:24:30 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:6:28:34 0/0:0:0:0:0:56:0%:99:1E0:42:56:20:36:56 0/0:0:0:0:0:35:0%:67:1E0:41:35:8:27:35 0/0:0:0:0:0:65:0%:99:1E0:41:65:17:48:65 0/0:0:0:0:0:35:0%:67:1E0:40:35:11:24:36 0/0:0:0:0:0:53:0%:99:1E0:42:53:15:38:53 0/0:0:0:0:0:27:0%:52:1E0:41:27:5:22:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:12:26:38 0/0:0:0:0:0:45:0%:85:1E0:42:45:16:29:45 0/0:0:0:0:0:29:0%:55:1E0:42:29:5:24:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:11:30:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:10:25:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:7:33:40 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:36:0%:66:1E0:41:36:11:25:37 0/0:0:0:0:0:20:0%:36:1E0:45:20:5:15:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:7:24:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:8:24:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:15:23:39 0/0:0:0:0:0:38:0%:70:1E0:39:38:8:30:39 0/0:0:0:0:0:17:0%:33:1E0:42:17:3:14:17 0/0:0:0:0:0:58:0%:99:1E0:42:58:19:39:58 0/0:0:0:0:0:24:0%:44:1E0:42:24:6:18:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:9:24:33 0/0:0:0:0:0:51:0%:97:1E0:40:51:12:39:51 0/0:0:0:0:0:51:0%:97:1E0:38:51:11:40:52 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:49:0%:93:1E0:41:49:8:41:49 0/0:0:0:0:0:33:0%:63:1E0:42:33:6:27:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:13:30:45 0/0:0:0:0:0:16:0%:29:1E0:45:16:5:11:17 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:9:19:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:10:25:35 0/0:0:0:0:0:13:0%:25:1E0:42:13:2:11:13 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:25 0/0:0:0:0:0:42:0%:77:1E0:40:42:14:28:42 0/0:0:0:0:0:17:0%:33:1E0:42:17:3:14:17 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:4:23:27 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:15:0%:29:1E0:38:15:3:12:15 0/0:0:0:0:0:45:0%:85:1E0:41:45:15:30:45 0/0:0:0:0:0:41:0%:78:1E0:43:41:11:30:42 0/0:0:0:0:0:29:0%:55:1E0:41:29:5:24:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:22 0/0:0:0:0:0:38:0%:70:1E0:39:38:9:29:38 0/0:0:0:0:0:31:0%:59:1E0:39:31:7:24:31 0/0:0:0:0:0:17:0%:33:1E0:42:17:6:11:18 0/0:0:0:0:0:29:0%:55:1E0:43:29:7:22:29 0/0:0:0:0:0:19:0%:37:1E0:39:19:6:13:19 0/0:0:0:0:0:37:0%:70:1E0:44:37:8:29:37 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:21 0/0:0:0:0:0:49:0%:93:1E0:38:49:11:38:49 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:30 0/0:0:0:0:0:46:0%:85:1E0:39:46:18:28:46 0/0:0:0:0:0:27:0%:52:1E0:40:27:5:22:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:40:0%:74:1E0:41:40:9:31:41 0/0:0:0:0:0:34:0%:62:1E0:39:34:6:28:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:7:27:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:10:25:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:19:0%:37:1E0:38:19:4:15:19 0/0:0:0:0:0:24:0%:44:1E0:38:24:6:18:24 0/0:0:0:0:0:36:0%:66:1E0:39:36:10:26:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:9:21:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:34:0%:62:1E0:41:34:7:27:34 0/0:0:0:0:0:25:0%:48:1E0:39:25:8:17:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:38 0/0:0:0:0:0:35:0%:67:1E0:39:35:13:22:37 0/0:0:0:0:0:39:0%:74:1E0:40:39:14:25:42 0/0:0:0:0:0:25:0%:48:1E0:38:25:5:20:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:9:26:35 0/0:0:0:0:0:26:0%:47:1E0:38:26:5:21:28 0/0:0:0:0:0:53:0%:99:1E0:38:53:14:39:53 0/0:0:0:0:0:57:0%:99:1E0:38:57:15:42:57 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:31 0/0:0:0:0:0:19:0%:37:1E0:39:19:6:13:20 0/0:0:0:0:0:45:0%:85:1E0:39:45:14:31:45 0/0:0:0:0:0:44:0%:81:1E0:39:44:11:33:46 0/0:0:0:0:0:51:0%:97:1E0:39:51:19:32:52 0/0:0:0:0:0:35:0%:67:1E0:37:35:15:20:37 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:8:22:30 0/0:0:0:0:0:51:0%:97:1E0:40:51:22:29:51 0/0:0:0:0:0:33:0%:63:1E0:38:33:4:29:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:42 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:27 0/0:0:0:0:0:38:0%:70:1E0:40:38:11:27:39 0/0:0:0:0:0:38:0%:70:1E0:38:38:12:26:38 0/0:0:0:0:0:36:0%:66:1E0:39:36:10:26:36 0/0:37:1:1:0:58:1.72%:94:5E-1:38:57:19:38:59 0/0:0:0:0:0:39:0%:74:1E0:39:39:14:25:39 0/0:0:0:0:0:44:0%:81:1E0:41:44:14:30:44 0/0:0:0:0:0:34:0%:62:1E0:40:34:11:23:34 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:22 0/0:0:0:0:0:28:0%:51:1E0:41:28:5:23:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:10:24:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:34 0/0:0:0:0:0:29:0%:55:1E0:37:29:7:22:29 0/0:38:1:1:0:20:5%:27:5E-1:41:19:4:15:20 0/0:0:0:0:0:43:0%:82:1E0:40:43:8:35:43 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:27 0/0:0:0:0:0:54:0%:99:1E0:40:54:18:36:55 0/0:0:0:0:0:27:0%:52:1E0:40:27:8:19:28 MTB_anc 62657 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|dnaB_Rv0058|gene59|transcript|Transcript_gene59|Coding|1/1|c.2262G>A|p.Pro754Pro|2262/2625|2262/2625|754/874||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.62657G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.62657G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:68:33:35:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:73:24:49:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:51:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:55:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:67:28:39:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 67078 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv0063_Rv0063|gene64|transcript|Transcript_gene64|Coding|1/1|c.156G>T|p.Pro52Pro|156/1440|156/1440|52/479||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.67078G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.67078G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:42:39:13:26:39 0/0:0:0:0:0:16:0%:29:1E0:52:16:9:7:16 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:45 0/0:39:1:0:1:31:3.23%:48:5E-1:46:30:11:19:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:51:24:17:7:26 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:31:0%:59:1E0:50:31:13:18:31 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:53 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:20 0/0:0:0:0:0:48:0%:89:1E0:47:48:27:21:49 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:18 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:36 0/0:0:0:0:0:17:0%:33:1E0:49:17:11:6:17 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:30 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:44 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:21 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:39:1:0:1:48:2.08%:76:5E-1:43:47:20:27:48 0/0:0:0:0:0:62:0%:99:1E0:46:62:36:26:62 0/0:0:0:0:0:48:0%:89:1E0:48:48:28:20:48 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:48:0%:89:1E0:43:48:17:31:48 0/0:0:0:0:0:20:0%:36:1E0:50:20:11:9:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:43 0/0:39:1:0:1:35:2.86%:55:5E-1:49:34:18:16:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:15:0%:29:1E0:39:15:11:4:15 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:37 0/0:0:0:0:0:52:0%:96:1E0:44:52:22:30:52 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:46 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:28 0/0:0:0:0:0:19:0%:37:1E0:49:19:4:15:19 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:21 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:49:36:15:21:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:34 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:60:1:1:0:47:2.13%:77:5E-1:44:46:23:23:47 0/0:36:1:1:0:27:3.7%:41:5E-1:48:26:17:9:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:20:10:30 0/0:0:0:0:0:21:0%:40:1E0:47:21:7:14:21 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:14:0%:25:1E0:47:14:7:7:14 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:49 0/0:60:1:0:1:30:3.33%:44:5E-1:41:29:14:15:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:38:1:0:1:31:3.23%:48:5E-1:43:30:15:15:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:60:1:1:0:31:3.23%:48:5E-1:42:30:15:15:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:35 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:40 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:38:1:1:0:34:2.94%:51:5E-1:46:33:17:16:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:19:8:27 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:0:0:0:0:53:0%:99:1E0:42:53:21:32:53 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:27 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:41:0%:78:1E0:47:41:16:25:41 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:49 0/0:0:0:0:0:50:0%:92:1E0:40:50:29:21:50 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:41 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:46 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:38 0/0:0:0:0:0:44:0%:81:1E0:39:44:25:19:46 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:45 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:51 0/0:0:0:0:0:45:0%:85:1E0:39:45:20:25:47 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:64:0%:99:1E0:39:64:34:30:64 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:26:17:43 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:31 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:23:10:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:37:1:0:1:54:1.85%:87:5E-1:43:53:25:28:54 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 MTB_anc 69871 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0064_Rv0064|gene66|transcript|Transcript_gene66|Coding|1/1|c.1252C>T|p.Leu418Phe|1252/2940|1252/2940|418/979||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.69871C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.69871C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:60:29:31:60:100%:99:1.035E-35:0:0:0:0:61 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:28:12:16:29:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:69:44:25:69:100%:99:4.233E-41:0:0:0:0:69 1/1:45:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:60:28:32:60:100%:99:1.035E-35:0:0:0:0:62 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:41:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:75:33:42:75:100%:99:1.0773E-44:0:0:0:0:75 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:60:31:29:60:100%:99:1.035E-35:0:0:0:0:61 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 70267 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0064_Rv0064|gene66|transcript|Transcript_gene66|Coding|1/1|c.1648T>G|p.Phe550Val|1648/2940|1648/2940|550/979||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.70267T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.70267T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:54:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:52:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:28:15:13:29:96.55%:99:9.9776E-16:30:1:1:0:29 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:19:10:9:20:95%:99:2.8292E-11:0:0:0:0:22 1/1:44:61:25:36:61:100%:99:2.609E-36:0:0:0:0:63 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:34:15:19:35:97.14%:99:3.2089E-19:39:1:0:1:35 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:52:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:62 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 MTB_anc 71584 . C CCGAGCGCTGTTCTGGCGCTAATCTGACGCTAGAATAG . PASS AC=151;AF=0.503;AN=300;ANN=CCGAGCGCTGTTCTGGCGCTAATCTGACGCTAGAATAG|intergenic_region|MODIFIER|Rv0064_Rv0064-vapB1_Rv0064A|gene66-gene67|intergenic_region|gene66-gene67|||n.71584_71585insCGAGCGCTGTTCTGGCGCTAATCTGACGCTAGAATAG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:39:23:11:12:32:69.7%:95:2.6558E-10:39:10:4:6:34 0/1:48:11:6:5:16:68.75%:44:3.3854E-5:46:5:1:4:16 0/1:46:27:6:21:41:64.29%:99:1.0249E-11:40:14:6:8:42 0/1:48:10:2:8:17:58.82%:39:1.2413E-4:45:6:5:1:18 0/1:47:15:4:11:21:71.43%:62:5.4994E-7:41:6:1:5:21 0/1:45:12:7:5:17:70.59%:49:1.1285E-5:38:5:1:4:17 0/1:51:13:6:7:17:72.22%:57:1.6121E-6:45:3:0:3:18 0/1:45:14:4:10:16:87.5%:65:2.5454E-7:38:2:1:1:16 0/1:46:10:5:5:18:55.56%:37:1.7215E-4:44:8:2:6:18 0/1:50:19:11:8:29:65.52%:79:1.2089E-8:51:8:4:4:29 0/1:46:8:5:3:13:61.54%:30:8.238E-4:46:5:2:3:14 0/1:50:19:10:9:28:67.86%:79:1.2089E-8:36:8:1:7:28 0/1:46:10:3:7:13:76.92%:42:5.3843E-5:43:3:1:2:13 0/1:42:27:8:19:35:77.14%:99:7.9014E-13:39:7:1:6:37 0/1:48:11:5:6:16:68.75%:46:2.4988E-5:37:4:0:4:17 0/1:40:16:7:9:20:76.19%:69:1.2221E-7:46:5:2:3:21 0/1:49:15:5:10:20:75%:64:3.8543E-7:42:5:1:4:20 0/1:42:6:3:3:13:46.15%:21:7.4534E-3:37:7:2:5:13 0/1:39:12:8:4:19:63.16%:47:1.8611E-5:40:7:2:5:19 0/1:49:10:4:6:18:55.56%:38:1.4831E-4:37:7:1:6:18 0/1:42:21:7:14:27:77.78%:92:5.6888E-10:37:6:4:2:27 0/1:50:22:10:12:39:56.41%:85:2.5665E-9:47:15:6:9:39 0/1:49:14:7:7:22:63.64%:56:2.1998E-6:40:7:3:4:22 0/1:49:14:10:4:36:38.89%:49:1.1295E-5:38:20:7:13:36 0/1:47:14:7:7:25:53.85%:52:5.4595E-6:41:12:7:5:26 0/1:47:14:4:10:27:51.85%:52:6.1806E-6:43:13:5:8:27 0/1:52:15:5:10:22:68.18%:61:7.4178E-7:40:7:3:4:22 0/1:47:16:4:12:22:72.73%:67:1.7905E-7:41:6:2:4:22 0/1:49:8:4:4:18:44.44%:29:1.2236E-3:43:8:3:5:18 0/1:50:16:9:7:25:64%:64:3.2617E-7:39:8:4:4:25 0/1:46:10:4:6:18:55.56%:38:1.4831E-4:41:7:1:6:18 0/1:45:19:7:12:27:70.37%:79:1.2089E-8:40:8:2:6:27 0/1:56:13:10:3:19:68.42%:53:5.0106E-6:40:6:2:4:19 0/1:44:10:2:8:17:58.82%:38:1.4831E-4:47:7:1:6:17 0/1:43:8:3:5:10:80%:34:3.5723E-4:38:2:0:2:10 0/1:44:16:9:7:22:72.73%:67:1.7905E-7:41:6:3:3:22 0/1:49:20:10:10:31:64.52%:80:9.197E-9:37:11:3:8:31 0/1:48:35:17:18:49:71.43%:99:1.4675E-15:47:14:8:6:50 0/1:49:25:15:10:36:69.44%:99:3.936E-11:41:11:3:8:36 0/1:52:23:13:10:37:62.16%:93:4.6576E-10:38:12:4:8:37 0/1:45:12:6:6:24:50%:44:3.8815E-5:36:12:3:9:24 0/1:44:21:13:8:31:67.74%:86:2.4087E-9:42:10:7:3:31 0/1:41:6:3:3:12:50%:21:6.865E-3:40:6:2:4:12 0/1:45:11:3:8:22:50%:40:9.1981E-5:40:11:7:4:22 0/1:40:14:6:8:21:66.67%:56:2.1998E-6:39:7:2:5:21 0/1:46:19:11:8:23:82.61%:86:2.1316E-9:35:4:2:2:23 0/1:50:12:5:7:19:63.16%:47:1.8611E-5:40:7:3:4:19 0/1:48:19:11:8:27:70.37%:79:1.2089E-8:43:8:3:5:27 0/1:42:22:9:13:37:59.46%:86:2.1194E-9:36:14:7:7:37 0/1:44:25:12:13:38:65.79%:99:6.9097E-11:41:13:5:8:38 0/1:48:10:4:6:19:52.63%:38:1.4831E-4:43:7:2:5:19 0/1:48:31:13:18:40:75.61%:99:3.008E-14:41:10:3:7:41 1/1:52:14:7:7:15:93.33%:69:1.0315E-7:38:1:0:1:15 0/1:45:25:9:16:33:75.76%:99:1.3235E-11:40:8:3:5:34 0/1:51:17:9:8:23:73.91%:74:3.8368E-8:37:5:0:5:23 0/1:45:27:11:16:32:81.82%:99:4.5192E-13:40:6:0:6:33 0/1:47:19:10:9:24:76%:84:3.6826E-9:36:5:2:3:25 0/1:42:9:3:6:12:69.23%:36:2.2883E-4:36:4:0:4:14 0/1:47:24:13:11:31:77.42%:99:2.7115E-11:44:7:1:6:31 0/1:50:16:9:7:20:80%:73:4.357E-8:52:3:3:0:20 0/1:51:17:10:7:20:85%:78:1.2848E-8:45:3:1:2:21 0/1:50:22:7:15:35:62.86%:87:1.7197E-9:36:13:3:10:35 0/1:47:23:9:14:33:69.7%:95:2.6558E-10:39:10:2:8:33 0/1:48:18:7:11:26:69.23%:74:3.6611E-8:37:8:2:6:26 0/1:41:23:6:17:36:60.53%:92:5.9342E-10:42:13:2:11:37 0/1:50:33:18:15:52:63.46%:99:5.4755E-14:39:19:8:11:52 0/1:47:14:8:6:21:66.67%:56:2.1998E-6:40:7:2:5:21 0/1:47:23:13:10:32:69.7%:95:2.6558E-10:36:10:2:8:34 0/1:49:8:4:4:14:57.14%:30:9.6618E-4:45:6:3:3:14 0/1:53:7:5:2:11:63.64%:27:1.935E-3:35:4:2:2:11 0/1:46:22:5:17:31:70.97%:93:4.1351E-10:43:8:3:5:31 0/1:52:14:8:6:19:73.68%:59:1.2025E-6:55:5:3:2:19 0/1:50:12:6:6:15:80%:52:5.2605E-6:36:3:1:2:15 0/1:52:14:6:8:23:60.87%:54:3.4067E-6:39:9:3:6:23 0/1:43:23:8:15:35:63.89%:93:4.6576E-10:39:12:4:8:36 0/1:40:12:7:5:21:57.14%:46:2.2548E-5:43:8:4:4:21 0/1:43:20:5:15:28:71.43%:85:2.7631E-9:37:7:4:3:28 0/1:49:14:6:8:20:70%:59:1.2025E-6:46:5:3:2:20 0/1:46:6:4:2:15:40%:20:8.4291E-3:39:9:4:5:15 0/1:42:13:4:9:21:61.9%:51:6.4422E-6:39:7:5:2:21 0/1:50:14:4:10:21:66.67%:57:1.6702E-6:41:6:1:5:22 0/1:41:19:5:14:33:57.58%:73:3.9837E-8:42:13:1:12:33 0/1:49:28:12:16:37:75.68%:99:6.3095E-13:47:9:1:8:38 0/1:48:20:10:10:25:80%:89:1.1273E-9:45:5:5:0:25 0/1:36:15:3:12:19:71.43%:62:5.4994E-7:45:6:3:3:21 0/1:44:10:5:5:14:71.43%:41:7.6278E-5:38:4:2:2:14 0/1:42:20:10:10:34:58.82%:78:1.4096E-8:38:13:2:11:34 0/1:38:6:3:3:12:50%:21:6.865E-3:39:6:0:6:12 0/1:50:24:14:10:33:72.73%:99:6.1763E-11:42:9:4:5:33 0/1:48:15:6:9:23:65.22%:61:7.4178E-7:50:7:4:3:23 0/1:50:14:4:10:24:58.33%:53:4.0663E-6:36:10:3:7:24 0/1:52:9:5:4:19:47.37%:32:5.1645E-4:52:9:5:4:19 0/1:41:24:2:22:44:54.55%:91:6.4513E-10:37:19:5:14:44 0/1:48:16:9:7:22:72.73%:67:1.7905E-7:38:6:1:5:22 0/1:46:38:18:20:47:80.85%:99:4.6601E-18:39:9:3:6:47 0/1:44:13:7:6:17:76.47%:55:2.5647E-6:37:4:0:4:17 0/1:44:15:5:10:24:62.5%:59:1.196E-6:36:9:2:7:24 0/1:44:20:11:9:34:58.82%:78:1.4096E-8:41:13:5:8:34 0/1:48:21:6:15:35:60%:83:4.9442E-9:38:13:2:11:37 0/1:49:12:6:6:22:54.55%:45:3.066E-5:44:10:3:7:23 0/1:50:8:4:4:20:40%:27:1.638E-3:36:12:3:9:20 0/1:41:12:3:9:27:44.44%:43:4.6796E-5:40:14:5:9:27 0/1:44:20:11:9:34:58.82%:78:1.4096E-8:36:13:3:10:35 0/1:47:15:8:7:24:62.5%:59:1.196E-6:39:9:3:6:24 0/1:43:16:8:8:23:66.67%:64:3.2617E-7:38:8:2:6:24 0/1:47:18:6:12:27:64.29%:72:6.1806E-8:41:10:2:8:29 0/1:44:14:6:8:22:60.87%:56:2.1998E-6:44:7:2:5:23 0/1:50:28:14:14:40:70%:99:1.3724E-12:39:11:5:6:40 0/1:48:22:12:10:32:68.75%:92:5.875E-10:42:9:3:6:32 0/1:43:18:8:10:31:58.06%:70:9.3503E-8:42:12:4:8:31 0/1:47:14:5:9:25:56%:53:4.7528E-6:37:11:7:4:25 0/1:46:25:13:12:32:78.12%:99:8.3928E-12:41:7:2:5:32 0/1:47:14:12:2:20:70%:57:1.6702E-6:35:6:0:6:20 0/1:47:14:5:9:23:60.87%:54:3.4067E-6:37:9:2:7:23 0/1:46:23:10:13:30:74.19%:98:1.3219E-10:34:8:0:8:31 0/1:43:25:13:12:34:71.43%:99:2.8437E-11:37:10:1:9:38 0/1:44:13:5:8:26:50%:47:1.6379E-5:36:13:2:11:26 0/1:45:20:10:10:31:64.52%:80:9.197E-9:38:11:2:9:33 0/1:50:14:8:6:23:60.87%:54:3.4067E-6:38:9:1:8:23 0/1:49:27:12:15:45:60%:99:2.4933E-11:36:18:9:9:45 0/1:47:24:11:13:36:66.67%:99:1.1892E-10:39:11:4:7:36 0/1:47:16:8:8:22:72.73%:67:1.7905E-7:37:6:1:5:22 0/1:45:20:12:8:27:74.07%:85:2.7631E-9:40:7:2:5:27 0/1:37:18:6:12:25:69.23%:74:3.6611E-8:36:8:1:7:26 0/1:41:16:8:8:26:61.54%:62:5.1256E-7:38:10:3:7:27 0/1:43:24:10:14:31:77.42%:99:1.647E-11:39:6:0:6:31 0/1:46:17:5:12:27:62.96%:69:1.0983E-7:35:8:0:8:28 0/1:47:15:11:4:25:60%:58:1.4522E-6:35:10:1:9:25 0/1:42:19:7:12:28:67.86%:77:1.6265E-8:35:9:1:8:28 0/1:43:28:12:16:37:75.68%:99:6.3095E-13:37:9:2:7:37 0/1:39:19:6:13:26:73.08%:84:3.6826E-9:35:5:1:4:26 0/1:44:19:9:10:33:57.58%:73:4.7323E-8:36:14:4:10:33 0/1:38:16:7:9:20:72.73%:69:1.2221E-7:37:5:0:5:22 0/1:42:23:13:10:27:85.19%:99:1.6161E-11:35:4:1:3:27 0/1:42:18:13:5:29:62.07%:72:6.1806E-8:35:10:3:7:29 0/1:44:17:6:11:28:60.71%:66:2.1913E-7:41:11:3:8:28 0/1:40:26:13:13:45:56.52%:99:8.3984E-11:36:19:3:16:46 0/1:49:15:9:6:26:55.56%:56:2.0087E-6:42:12:6:6:27 0/1:46:27:12:15:34:79.41%:99:7.9014E-13:41:7:2:5:34 0/1:44:17:8:9:30:56.67%:65:3.0928E-7:44:13:3:10:30 0/1:42:23:11:12:33:69.7%:97:1.9117E-10:38:9:2:7:33 0/1:45:8:3:5:17:47.06%:28:1.3389E-3:40:9:5:4:17 0/1:44:14:6:8:24:58.33%:53:4.0663E-6:39:10:4:6:24 0/1:50:20:5:15:28:71.43%:84:3.9563E-9:37:8:0:8:28 0/1:44:21:7:14:26:80.77%:94:3.4262E-10:35:5:2:3:26 0/1:44:17:9:8:21:77.27%:74:3.8368E-8:36:5:1:4:22 0/1:44:20:13:7:29:68.97%:84:3.9563E-9:36:8:1:7:29 0/1:43:20:8:12:32:62.5%:79:1.1508E-8:39:12:3:9:32 0/1:45:25:10:15:44:56.82%:96:2.3358E-10:42:19:5:14:44 0/1:47:15:6:9:22:68.18%:61:7.4178E-7:36:7:2:5:22 MTB_anc 75708 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|synonymous_variant|LOW|Rv0068_Rv0068|gene71|transcript|Transcript_gene71|Coding|1/1|c.408A>C|p.Arg136Arg|408/912|408/912|136/303||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.75708A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.75708A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:50 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:17 0/0:0:0:0:0:56:0%:99:1E0:44:56:30:26:56 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:20 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:30:0%:55:1E0:49:30:10:20:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:53:0%:99:1E0:45:53:24:29:54 0/0:0:0:0:0:15:0%:29:1E0:49:15:9:6:15 0/0:0:0:0:0:57:0%:99:1E0:47:57:34:23:57 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:15:0%:29:1E0:49:15:3:12:16 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:24 0/0:0:0:0:0:57:0%:99:1E0:44:57:35:22:58 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:24 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:40 0/0:0:0:0:0:43:0%:82:1E0:49:43:20:23:43 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:39 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:48 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:39 0/0:0:0:0:0:57:0%:99:1E0:45:57:28:29:58 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:20 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:37:0%:70:1E0:49:37:19:18:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:47 0/0:0:0:0:0:36:0%:66:1E0:46:36:23:13:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:25 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:15:0%:29:1E0:42:15:4:11:15 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:19 0/0:0:0:0:0:53:0%:99:1E0:41:53:25:28:55 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:48 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:28 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/1:43:11:9:2:34:32.35%:37:1.8662E-4:41:23:8:15:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:24:0%:44:1E0:37:24:7:17:27 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:18 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:44:0%:81:1E0:40:44:28:16:45 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:38 0/0:0:0:0:0:50:0%:92:1E0:39:50:33:17:51 0/0:0:0:0:0:35:0%:67:1E0:42:35:24:11:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:30 0/0:0:0:0:0:57:0%:99:1E0:44:57:35:22:57 0/0:0:0:0:0:64:0%:99:1E0:40:64:35:29:64 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:26 0/0:0:0:0:0:48:0%:89:1E0:39:48:24:24:50 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:44 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:40 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:41:37:11:26:37 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:46 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:50 0/0:0:0:0:0:36:0%:66:1E0:36:36:20:16:38 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:21 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:38 0/0:0:0:0:0:51:0%:97:1E0:39:51:24:27:51 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:34 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:30:12:43 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:44:0%:81:1E0:44:44:29:15:44 0/0:0:0:0:0:56:0%:99:1E0:43:56:26:30:57 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:42 MTB_anc 76835 . C T . PASS AC=68;AF=0.227;AN=300;ANN=T|stop_gained|HIGH|sdaA_Rv0069c|gene72|transcript|Transcript_gene72|Coding|1/1|c.788G>A|p.Trp263*|788/1386|788/1386|263/461||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.76835C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.76835C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:40:45:17:28:45 0/0:0:0:0:0:16:0%:29:1E0:43:16:3:13:17 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 0/0:37:1:0:1:15:6.67%:21:5E-1:50:14:7:7:15 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:20 0/0:0:0:0:0:19:0%:37:1E0:51:19:12:7:19 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:45:0%:85:1E0:40:45:15:30:45 0/0:0:0:0:0:12:0%:21:1E0:45:12:5:7:12 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:9:20:29 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:20 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:42 0/0:0:0:0:0:23:0%:44:1E0:41:23:7:16:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:17:0%:33:1E0:49:17:11:6:17 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:20:0%:36:1E0:43:20:14:6:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:18:5:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:45:0%:85:1E0:43:45:29:16:45 0/0:0:0:0:0:52:0%:96:1E0:42:52:22:30:52 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:44 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:10:23:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:41 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:36 0/0:39:1:0:1:37:2.7%:59:5E-1:42:36:21:15:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:20 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:38 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:29 0/0:0:0:0:0:54:0%:99:1E0:41:54:30:24:54 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:37:1:0:1:17:5.88%:24:5E-1:43:16:9:7:17 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:16 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:47 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:18 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:39:1:1:0:32:3.12%:48:5E-1:42:31:13:18:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:39:1:0:1:25:4%:38:5E-1:48:24:13:11:25 0/0:0:0:0:0:56:0%:99:1E0:40:56:24:32:56 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:47 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 1/1:39:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:37:34:16:18:36 0/0:0:0:0:0:43:0%:82:1E0:41:43:13:30:43 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:18 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:39 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:24 1/1:39:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:34:1:0:1:29:3.45%:45:5E-1:41:28:12:16:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 1/1:39:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:37:1:0:1:30:3.33%:44:5E-1:41:29:12:17:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:45 0/0:0:0:0:0:52:0%:96:1E0:39:52:19:33:52 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:16:6:23 0/0:0:0:0:0:44:0%:81:1E0:38:44:19:25:44 1/1:38:28:4:24:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:44:12:32:45:97.78%:99:4.4304E-25:39:1:0:1:46 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:46:0%:85:1E0:38:46:21:25:46 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:26:0%:47:1E0:37:26:11:15:27 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:39 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:36:0%:66:1E0:37:36:11:25:39 0/0:0:0:0:0:20:0%:36:1E0:37:20:4:16:20 0/0:60:1:0:1:29:3.45%:45:5E-1:40:28:11:17:29 0/0:0:0:0:0:53:0%:99:1E0:39:53:20:33:53 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:46:0%:85:1E0:39:46:16:30:46 0/0:0:0:0:0:40:0%:74:1E0:40:40:14:26:41 MTB_anc 78925 . CG C . PASS AC=63;AF=0.210;AN=300;ANN=C|intergenic_region|MODIFIER|glyA2_Rv0070c-Rv0071_Rv0071|gene73-gene74|intergenic_region|gene73-gene74|||n.78926delG||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:1:0:37:2.7%:59:5E-1:42:36:17:19:37 0/0:0:0:0:0:20:0%:36:1E0:55:20:8:12:20 1/1:46:48:25:23:51:94.12%:99:6.2071E-26:32:3:2:1:51 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:42:0%:77:1E0:47:42:25:17:43 0/0:38:1:0:1:23:4.35%:34:5E-1:49:22:8:14:23 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:21 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:42 0/0:0:0:0:0:19:0%:37:1E0:52:19:14:5:19 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:28:12:16:29:96.55%:99:9.9776E-16:32:1:0:1:29 0/0:29:2:0:2:29:6.9%:37:2.4561E-1:47:27:17:10:29 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:19 1/1:47:29:17:12:30:96.67%:99:2.6212E-16:35:1:1:0:30 1/1:45:27:19:8:28:96.43%:99:3.7915E-15:33:1:1:0:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:21:12:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:22:0%:40:1E0:50:22:13:9:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:16:0%:29:1E0:50:16:9:7:16 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 1/1:44:23:13:10:24:95.83%:99:7.7525E-13:34:1:0:1:24 1/1:49:31:17:14:32:93.94%:99:1.8007E-17:37:1:1:0:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 1/1:49:33:21:12:34:97.06%:99:1.2301E-18:33:1:0:1:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:60:1:0:1:61:1.64%:99:5E-1:45:60:34:26:61 1/1:46:40:20:20:41:97.56%:99:9.8874E-23:33:1:0:1:41 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 1/1:46:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:39:0%:74:1E0:47:39:19:20:40 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:17 0/0:0:0:0:0:21:0%:40:1E0:47:21:14:7:22 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:26 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:37:1:1:0:36:2.78%:55:5E-1:42:35:18:17:36 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:41 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:38:1:0:1:15:6.67%:21:5E-1:42:14:6:8:15 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:39 1/1:46:28:16:12:29:96.55%:99:9.9776E-16:32:1:0:1:29 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:46 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:38:1:0:1:35:2.86%:55:5E-1:49:34:17:17:36 0/0:0:0:0:0:54:0%:99:1E0:44:54:33:21:54 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:39 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:60:1:1:0:28:3.57%:41:5E-1:48:27:15:12:28 0/0:60:1:0:1:34:2.94%:51:5E-1:52:33:17:16:35 0/0:0:0:0:0:17:0%:33:1E0:49:17:10:7:17 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:32 1/1:43:22:12:10:22:95.65%:99:2.9149E-12:33:1:0:1:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:24:5:29 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:34:1:0:1:37:2.7%:59:5E-1:46:36:18:18:37 1/1:49:35:18:17:36:97.22%:99:8.3613E-20:35:1:1:0:36 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/1:48:24:13:11:27:88.89%:99:2.0853E-12:34:3:2:1:27 1/1:44:27:15:12:27:96.43%:99:3.7915E-15:32:1:0:1:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 1/1:48:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:25 0/0:0:0:0:0:18:0%:32:1E0:54:18:6:12:18 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:38:1:0:1:29:3.45%:45:5E-1:42:28:18:10:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:46 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:47:0%:89:1E0:46:47:21:26:47 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:30:1:0:1:28:3.57%:41:5E-1:42:27:15:12:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 1/1:43:33:19:14:33:97.06%:99:1.2301E-18:37:1:1:0:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 1/1:40:36:18:18:37:94.74%:99:1.1316E-19:35:2:2:0:38 1/1:40:55:28:27:53:100%:99:1.0149E-32:0:0:0:0:55 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:34 0/0:0:0:0:0:45:0%:85:1E0:43:45:16:29:45 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:55:0%:99:1E0:42:55:30:25:56 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:50 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:29 0/0:0:0:0:0:48:0%:89:1E0:40:48:21:27:49 1/1:37:28:18:10:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 1/1:42:37:24:13:36:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:40 1/1:41:41:19:22:40:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:57:0%:99:1E0:38:57:27:30:58 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 1/1:47:24:13:11:24:96%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 1/1:43:40:18:22:41:97.56%:99:9.8874E-23:37:1:0:1:41 1/1:43:33:22:11:33:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:53 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 MTB_anc 79504 . TCGGTGGACCCGGTGGACC TCGGTGGACC,T . PASS AC=157,1;AF=0.523,3.333e-03;AN=300;NC=0;WT=0;set=Intersection GT:ABQ:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:9:11:24:76.92%:87:1.8273E-9:36:6:3:3:27 0/1:55:3:6:14:64.29%:35:2.8986E-4:54:5:3:2:14 0/1:47:26:11:49:75.51%:99:4.3492E-17:37:11:8:3:50 0/1:44:9:12:27:75%:90:8.7917E-10:34:7:6:1:28 0/1:42:7:11:25:72%:75:2.6626E-8:46:7:5:2:25 0/1:43:10:8:20:85.71%:84:3.7603E-9:33:3:2:1:21 0/1:49:13:17:40:75%:99:9.555E-14:39:10:5:5:41 0/1:41:13:7:25:76.92%:87:1.8273E-9:39:6:2:4:26 0/1:41:8:10:24:75%:77:1.8413E-8:47:6:4:2:25 0/1:48:16:8:32:75%:99:4.1964E-11:40:8:3:5:32 0/1:40:11:5:21:72.73%:67:1.7905E-7:48:6:5:1:23 0/1:44:8:19:33:79.41%:99:7.9014E-13:39:7:3:4:35 0/1:49:5:8:20:65%:51:6.4422E-6:40:7:3:4:20 0/1:42:12:21:43:75%:99:4.5585E-15:37:11:5:6:44 0/1:43:9:9:21:78.26%:79:1.1937E-8:41:5:4:1:24 0/1:46:11:11:27:81.48%:99:1.0343E-10:45:5:1:4:28 0/1:45:11:10:27:75%:90:8.7917E-10:34:7:3:4:28 0/1:45:13:9:27:81.48%:99:1.0343E-10:38:5:4:1:27 0/1:49:6:6:16:75%:50:8.0605E-6:36:4:2:2:16 0/1:47:4:10:20:70%:57:1.6702E-6:36:6:6:0:20 1/1:43:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:44:16:12:36:77.78%:99:4.0051E-13:36:8:4:4:36 0/1:42:15:9:33:70.59%:99:8.7205E-11:36:10:2:8:34 0/1:44:13:10:32:69.7%:95:2.6558E-10:36:10:4:6:33 0/1:47:5:7:16:75%:50:8.0605E-6:37:4:1:3:16 0/1:44:3:5:14:57.14%:30:9.6618E-4:52:6:5:1:14 0/1:42:5:14:23:82.61%:86:2.1316E-9:42:4:1:3:23 0/1:51:4:4:11:72.73%:32:5.16E-4:38:3:0:3:11 0/1:44:5:14:24:79.17%:84:3.6826E-9:38:5:4:1:24 0/1:39:10:12:28:75.86%:95:2.7763E-10:35:7:3:4:29 1/1:40:9:12:22:91.3%:99:3.6437E-11:38:2:1:1:23 0/1:38:9:7:21:76.19%:69:1.2221E-7:39:5:4:1:21 0/1:49:15:7:30:73.33%:93:4.1351E-10:35:8:2:6:30 0/1:41:11:11:26:81.48%:99:1.0343E-10:46:5:3:2:27 0/1:41:18:17:41:85.37%:99:2.5278E-17:37:6:3:3:42 1/1:42:14:10:25:96%:99:2.0568E-13:33:1:0:1:25 0/1:39:15:13:32:87.5%:99:3.2142E-14:42:4:2:2:32 0/1:46:17:25:51:80.77%:99:6.7918E-20:40:10:7:3:52 0/1:42:16:16:36:86.49%:99:4.8717E-16:40:5:4:1:37 0/1:46:14:14:33:84.85%:99:6.9527E-14:36:5:3:2:33 0/1:40:10:12:26:81.48%:99:1.0343E-10:41:5:2:3:27 0/1:39:15:21:45:80%:99:5.1219E-17:40:9:8:1:46 0/1:37:8:8:22:72.73%:67:1.7905E-7:51:6:6:0:22 0/1:46:8:10:26:69.23%:74:3.6611E-8:34:8:6:2:26 0/1:37:3:8:16:64.71%:43:4.3258E-5:34:6:4:2:17 0/1:40:8:6:24:58.33%:55:2.7817E-6:37:8:1:7:24 0/1:42:9:10:24:79.17%:84:3.6826E-9:37:5:4:1:24 0/1:40:10:15:33:73.53%:99:1.9819E-11:36:9:5:4:34 0/1:40:9:13:30:73.33%:93:4.1351E-10:34:8:5:3:31 0/1:45:10:16:30:81.25%:99:1.5064E-12:47:6:2:4:32 0/1:47:7:2:12:75%:37:1.6826E-4:51:3:2:1:13 0/1:38:4:15:22:82.61%:86:2.1316E-9:41:4:3:1:23 1/1:50:9:11:22:90.91%:98:1.3117E-10:34:2:1:1:22 0/1:43:12:13:32:75.76%:99:1.3235E-11:40:8:5:3:33 0/1:39:6:5:18:61.11%:42:5.2969E-5:35:7:4:3:19 0/1:41:14:16:44:68.18%:99:3.8642E-13:38:14:10:4:45 0/1:40:7:9:21:76.19%:69:1.2221E-7:33:5:3:2:21 0/1:47:12:8:24:83.33%:91:6.3493E-10:35:4:0:4:25 0/1:42:16:20:41:87.8%:99:3.2269E-18:35:5:3:2:41 0/1:47:9:13:36:61.11%:86:2.1194E-9:41:14:5:9:36 0/1:48:7:11:24:75%:77:1.8413E-8:47:6:5:1:24 0/1:37:12:19:34:86.11%:99:1.6935E-15:36:5:3:2:36 1/1:41:17:20:39:90.24%:99:3.5075E-19:35:4:1:3:42 0/1:44:15:14:32:87.88%:99:3.5714E-15:42:3:1:2:33 0/1:48:14:12:33:78.79%:99:2.5824E-12:38:7:4:3:34 0/1:45:17:23:49:80%:99:7.4728E-19:37:10:4:6:50 0/1:44:13:5:23:78.26%:79:1.1937E-8:41:5:1:4:23 0/1:46:13:15:35:80%:99:2.4048E-13:43:7:3:4:36 0/1:47:5:2:10:70%:28:1.548E-3:43:3:2:1:12 0/1:38:6:9:26:55.56%:56:2.0087E-6:43:12:8:4:27 0/1:47:10:17:36:75%:99:2.0026E-12:44:9:7:2:36 0/1:48:15:16:41:75.61%:99:3.008E-14:54:10:8:2:41 0/1:47:9:11:27:74.07%:85:2.7631E-9:49:7:4:3:27 0/1:52:9:8:26:65.38%:68:1.4238E-7:43:9:7:2:26 0/1:43:13:13:36:72.22%:99:9.2118E-12:35:10:4:6:36 0/1:42:8:9:23:73.91%:72:5.7694E-8:40:6:1:5:23 0/1:41:7:10:20:85%:78:1.2848E-8:36:3:1:2:20 0/1:48:10:14:29:82.76%:99:9.2544E-12:51:5:4:1:30 0/1:40:12:8:24:83.33%:91:6.3493E-10:43:4:3:1:26 0/1:37:10:10:26:76.92%:87:1.8273E-9:35:6:1:5:27 0/1:43:13:11:32:75%:99:2.7115E-11:36:7:5:2:32 0/1:39:9:13:29:73.33%:93:4.1351E-10:42:8:3:5:30 0/1:43:11:15:35:74.29%:99:6.3192E-12:36:9:4:5:37 0/1:43:11:7:25:72%:75:2.6626E-8:36:7:5:2:25 0/1:39:7:10:25:65.38%:68:1.4238E-7:36:9:7:2:26 1/1:40:16:14:30:93.75%:99:3.0612E-16:37:2:1:1:33 0/1:43:8:9:20:85%:78:1.2848E-8:51:3:2:1:20 0/1:37:6:4:15:58.82%:38:1.4831E-4:45:7:6:1:17 0/1:45:16:15:36:83.78%:99:3.4914E-15:44:6:4:2:37 0/1:46:16:7:30:76.67%:99:8.7055E-11:33:7:4:3:30 0/1:45:15:14:36:80.56%:99:7.2821E-14:36:7:4:3:36 0/1:57:6:7:18:72.22%:54:3.7078E-6:40:5:1:4:18 0/1:38:9:9:27:66.67%:73:4.8354E-8:38:9:5:4:27 0/1:40:5:10:21:71.43%:62:5.4994E-7:40:6:3:3:21 0/1:41:20:17:42:84.09%:99:4.4107E-18:39:7:3:4:45 0/1:39:6:8:17:77.78%:60:8.0605E-7:33:4:3:1:18 0/1:39:8:6:17:82.35%:63:4.8851E-7:35:3:1:2:17 0/1:41:16:13:36:80.56%:99:7.2821E-14:35:7:4:3:36 0/1:37:11:10:27:75%:90:8.7917E-10:35:7:2:5:28 0/1:39:5:13:24:72%:75:2.6626E-8:36:7:5:2:25 0/1:43:7:11:22:81.82%:81:7.1052E-9:32:4:3:1:22 1/1:38:13:15:30:90.32%:99:1.2857E-14:33:3:2:1:31 0/1:34:10:14:30:75%:99:4.1964E-11:36:8:4:4:32 0/1:41:8:14:27:81.48%:99:1.0343E-10:43:5:3:2:27 0/1:38:5:9:17:77.78%:60:8.0605E-7:35:4:1:3:18 0/1:44:10:16:33:78.79%:99:2.5824E-12:34:7:1:6:33 0/1:43:4:8:19:63.16%:47:1.8611E-5:37:7:3:4:19 0/1:45:6:15:26:80.77%:94:3.4262E-10:35:5:5:0:26 0/1:42:16:16:36:88.89%:99:2.0653E-16:37:4:4:0:36 0/1:47:9:21:35:85.71%:99:5.8653E-15:36:5:1:4:35 0/1:42:9:11:22:83.33%:91:6.3493E-10:42:4:2:2:24 0/1:40:12:7:25:76%:82:5.8245E-9:39:6:4:2:25 0/1:33:8:11:20:86.36%:89:1.0931E-9:37:3:1:2:22 0/1:47:15:11:31:83.87%:99:8.0999E-13:36:5:2:3:31 0/1:38:10:8:27:66.67%:73:4.8354E-8:33:9:5:4:27 0/1:37:13:20:39:80.49%:99:1.0617E-15:35:8:5:3:41 0/1:38:10:9:21:76%:84:3.6826E-9:36:5:3:2:26 0/1:41:16:14:34:85.71%:99:5.8653E-15:39:5:2:3:35 0/1:40:7:8:23:65.22%:60:9.5813E-7:36:8:6:2:23 0/1:38:13:19:39:80%:99:3.51E-15:36:8:3:5:41 0/1:43:17:18:40:85.37%:99:2.5278E-17:34:6:3:3:41 0/2:43:6:6:16:75%:50:8.0605E-6:38:4:3:1:17 0/1:36:6:12:24:69.23%:74:3.6611E-8:36:8:3:5:27 0/1:39:15:16:43:70.45%:99:9.3274E-14:37:13:7:6:46 0/1:35:9:11:28:66.67%:81:7.1675E-9:36:10:4:6:30 0/1:39:15:12:31:84.38%:99:2.3785E-13:34:5:2:3:32 0/1:36:12:16:34:80%:99:2.4048E-13:36:7:3:4:36 0/1:40:13:12:37:67.57%:99:5.2839E-11:34:12:4:8:37 0/1:40:4:13:25:65.38%:68:1.4238E-7:34:9:4:5:26 0/1:39:9:9:24:72%:75:2.6626E-8:39:7:5:2:25 0/1:40:15:7:28:78.57%:97:1.7583E-10:34:6:2:4:28 0/1:41:15:13:34:80%:99:2.4048E-13:34:7:5:2:37 0/1:39:7:9:20:80%:71:7.7086E-8:42:4:2:2:21 0/1:37:13:13:32:81.25%:99:1.5064E-12:36:6:4:2:32 0/1:38:12:12:30:77.42%:99:2.7115E-11:35:7:3:4:31 0/1:43:13:10:27:82.14%:99:1.6161E-11:29:4:2:2:28 0/1:40:22:21:57:72.88%:99:2.3681E-19:34:15:7:8:60 0/1:41:12:14:35:72.22%:99:9.2118E-12:35:10:7:3:37 0/1:41:10:14:29:82.76%:99:9.2544E-12:41:5:1:4:30 0/1:39:11:17:36:77.78%:99:4.0051E-13:34:8:2:6:36 0/1:43:13:6:23:79.17%:86:2.1316E-9:42:4:2:2:24 0/1:42:6:10:18:88.89%:76:2.0936E-8:35:2:1:1:18 1/1:37:16:17:34:94.29%:99:5.9366E-18:33:2:1:1:35 0/1:44:9:11:24:83.33%:91:6.3493E-10:34:4:3:1:24 0/1:38:15:10:30:83.33%:99:2.745E-12:36:5:3:2:30 0/1:43:6:16:27:81.48%:99:1.0343E-10:36:5:3:2:27 0/1:42:13:15:34:82.35%:99:1.349E-13:39:6:3:3:34 0/1:43:20:9:34:82.86%:99:4.008E-14:36:6:4:2:35 0/1:38:19:8:35:75%:99:2.0026E-12:36:9:4:5:38 0/1:38:17:16:37:84.62%:99:2.9926E-16:35:6:1:5:40 MTB_anc 79748 . T G . PASS AC=4;AF=0.013;AN=300;ANN=G|missense_variant|MODERATE|Rv0071_Rv0071|gene74|transcript|Transcript_gene74|Coding|1/1|c.263T>G|p.Val88Gly|263/708|263/708|88/235||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.79748T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.79748T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:35 0/0:0:0:0:0:14:0%:25:1E0:46:14:9:5:15 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:53 0/0:0:0:0:0:30:0%:55:1E0:42:30:8:22:31 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:7:17:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:35 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:45 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:17 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:19 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:29 0/0:0:0:0:0:20:0%:36:1E0:43:20:14:6:20 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:17 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:35:25:14:11:26 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:41 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:23 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:22 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:31 0/0:0:0:0:0:24:0%:44:1E0:41:24:8:16:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:31 0/0:0:0:0:0:32:0%:59:1E0:35:32:18:14:35 0/0:0:0:0:0:30:0%:55:1E0:36:30:16:14:30 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:50 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:44 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:46 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 0/0:0:0:0:0:29:0%:55:1E0:36:29:7:22:30 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:23 0/0:0:0:0:0:17:0%:33:1E0:40:17:6:11:17 0/0:0:0:0:0:20:0%:36:1E0:37:20:6:14:20 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:31 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:21 0/0:0:0:0:0:32:0%:59:1E0:38:32:12:20:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:35 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:10 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:31 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:16 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:15 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:21 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:43 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:22 0/0:0:0:0:0:27:0%:52:1E0:38:27:17:10:27 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:32 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:23 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:43 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:50:0%:92:1E0:40:50:21:29:51 0/0:0:0:0:0:30:0%:55:1E0:46:30:20:10:32 0/0:33:1:0:1:23:4.35%:34:5E-1:41:22:11:11:25 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:16 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:18 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:26 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:23 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:30 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:24 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:18:0%:32:1E0:40:18:3:15:19 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:32 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:23 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:19 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:33 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:19 0/0:0:0:0:0:35:0%:67:1E0:37:35:22:13:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:25 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:45 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:25 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:26 0/0:0:0:0:0:30:0%:55:1E0:36:30:16:14:31 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:25 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:8:20:32 0/0:0:0:0:0:17:0%:33:1E0:34:17:7:10:18 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:19 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:31 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:18 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:26 0/0:0:0:0:0:31:0%:59:1E0:36:31:17:14:34 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:30 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:17 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:37:27:7:20:31 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:39 0/0:0:0:0:0:33:0%:63:1E0:37:33:16:17:36 0/0:0:0:0:0:36:0%:66:1E0:37:36:13:23:39 0/0:0:0:0:0:23:0%:44:1E0:38:23:7:16:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:39 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:42 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:28 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:47:0%:89:1E0:38:47:17:30:50 0/0:0:0:0:0:38:0%:70:1E0:38:38:12:26:42 0/0:0:0:0:0:46:0%:85:1E0:38:46:21:25:49 0/0:30:1:1:0:44:2.27%:69:5E-1:37:43:18:25:48 0/0:0:0:0:0:39:0%:74:1E0:38:39:24:15:44 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:27 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:35 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:26 0/0:0:0:0:0:42:0%:77:1E0:38:42:16:26:44 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:33 0/0:0:0:0:0:27:0%:52:1E0:35:27:15:12:31 0/0:0:0:0:0:22:0%:40:1E0:35:22:12:10:23 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:22 0/0:0:0:0:0:44:0%:81:1E0:37:44:15:29:50 0/0:0:0:0:0:35:0%:67:1E0:38:35:10:25:35 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:36 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:42 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:37 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:36 0/0:0:0:0:0:50:0%:92:1E0:40:50:27:23:51 0/0:0:0:0:0:45:0%:85:1E0:37:45:23:22:48 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:27 MTB_anc 81963 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0073_Rv0073|gene76|transcript|Transcript_gene76|Coding|1/1|c.288G>A|p.Leu96Leu|288/993|288/993|96/330||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.81963G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.81963G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:39:21:18:40:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:58:39:19:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:17:8:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:51:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:48:35:13:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:45:26:19:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:60:36:24:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 83842 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0074_Rv0074|gene77|transcript|Transcript_gene77|Coding|1/1|c.1095G>A|p.Pro365Pro|1095/1236|1095/1236|365/411||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.83842G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.83842G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:10:17:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:13:13:27:96.3%:99:1.4382E-14:39:1:1:0:27 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:65:34:31:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:45:56:36:20:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:36:18:18:37:97.3%:99:2.1762E-20:60:1:0:1:38 1/1:43:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:52:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:42:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:63 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:21:15:6:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 MTB_anc 83982 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|splice_region_variant&stop_retained_variant|LOW|Rv0074_Rv0074|gene77|transcript|Transcript_gene77|Coding|1/1|c.1235A>G|p.Ter412Ter|1235/1236|1235/1236|412/411||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.83982A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.83982A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:24:13:11:25:96%:99:3.101E-14:0:0:0:0:25 1/1:43:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:24:12:12:25:96%:99:2.0568E-13:34:1:0:1:28 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:66:33:33:66:100%:99:2.6498E-39:0:0:0:0:69 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:24:14:10:25:96%:99:2.0568E-13:33:1:1:0:25 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:26:11:15:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:19:6:26:96.15%:99:5.4444E-14:34:1:1:0:27 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:42:23:19:43:97.67%:99:6.6289E-24:39:1:1:0:44 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:36:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:37:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:36:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:36:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:43:21:22:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:14:6:8:15:93.33%:69:1.0315E-7:38:1:0:1:15 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:45:25:20:46:97.83%:99:1.1441E-25:37:1:0:1:50 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 89200 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0080_Rv0080|gene85|transcript|Transcript_gene85|Coding|1/1|c.179T>G|p.Val60Gly|179/459|179/459|60/152||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.89200T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.89200T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:48:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:51:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:53:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:13:22:36:97.22%:99:8.3613E-20:37:1:0:1:36 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:49:18:31:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:53:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:37:15:22:38:97.37%:99:5.6582E-21:60:1:1:0:38 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:19:11:8:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:54:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:37:16:21:38:97.37%:99:5.6582E-21:39:1:1:0:39 1/1:39:36:12:24:37:97.3%:99:2.1762E-20:38:1:1:0:37 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 94344 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|hycQ_Rv0086|gene91|transcript|Transcript_gene91|Coding|1/1|c.394G>A|p.Val132Ile|394/1467|394/1467|132/488||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.94344G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.94344G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:50:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:50:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:48:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:56:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:61:28:33:61:100%:99:2.609E-36:0:0:0:0:62 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:54:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:50:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:25:11:14:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:60:23:37:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:37:22:15:38:97.37%:99:5.6582E-21:60:1:1:0:38 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 97696 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0088_Rv0088-Rv0089_Rv0089|gene93-gene94|intergenic_region|gene93-gene94|||n.97696C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:36:15:21:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:48:21:27:48:100%:99:1.554E-28:0:0:0:0:51 1/1:44:54:21:33:55:100%:99:4.0229E-32:0:0:0:0:57 1/1:48:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:17:18:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:24:13:11:25:100%:99:3.101E-14:0:0:0:0:27 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:40:43:22:21:44:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 MTB_anc 97757 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0088_Rv0088-Rv0089_Rv0089|gene93-gene94|intergenic_region|gene93-gene94|||n.97757C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:62:0%:99:1E0:44:62:32:30:62 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:57:0%:99:1E0:45:57:24:33:57 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:60:1:0:1:26:3.85%:38:5E-1:50:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:51:29:12:17:29 0/0:0:0:0:0:36:0%:66:1E0:52:36:23:13:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:54:0%:99:1E0:47:54:25:29:54 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:20:0%:36:1E0:42:20:6:14:21 0/0:0:0:0:0:62:0%:99:1E0:44:62:25:37:62 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:32 0/0:0:0:0:0:47:0%:89:1E0:47:47:21:26:48 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:21 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:36 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:44 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:38:0%:70:1E0:49:38:22:16:38 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:48 0/0:0:0:0:0:54:0%:99:1E0:48:54:24:30:56 0/0:0:0:0:0:56:0%:99:1E0:44:56:20:36:57 0/0:0:0:0:0:49:0%:93:1E0:44:49:31:18:50 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:60:1:0:1:37:2.7%:59:5E-1:47:36:21:15:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:43 0/0:0:0:0:0:17:0%:33:1E0:52:17:9:8:17 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:38:1:0:1:39:2.56%:62:5E-1:44:38:18:20:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:54:0%:99:1E0:41:54:26:28:54 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:44 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:34 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:45 0/0:0:0:0:0:27:0%:52:1E0:49:27:10:17:27 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:0:0:0:0:47:0%:89:1E0:45:47:24:23:47 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:18 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:32 0/0:0:0:0:0:32:0%:59:1E0:52:32:18:14:33 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:39:1:0:1:38:2.63%:58:5E-1:44:37:15:22:39 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:46:40:23:17:40 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:39:2:0:2:39:5.13%:54:2.4675E-1:46:37:13:24:39 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:37:1:1:0:30:3.33%:44:5E-1:49:29:13:16:30 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:50 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:50:0%:92:1E0:47:50:32:18:50 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:37:0%:70:1E0:40:37:12:25:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:39:1:1:0:48:2.08%:76:5E-1:41:47:23:24:50 0/0:0:0:0:0:53:0%:99:1E0:41:53:22:31:54 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:46:0%:85:1E0:40:46:19:27:46 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:49 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 0/0:0:0:0:0:25:0%:48:1E0:39:25:7:18:26 0/0:0:0:0:0:56:0%:99:1E0:41:56:25:31:56 0/0:39:1:0:1:45:2.22%:73:5E-1:43:44:23:21:45 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:38 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:49 0/0:0:0:0:0:47:0%:89:1E0:40:47:19:28:48 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:46 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:45:0%:85:1E0:38:45:24:21:47 0/0:0:0:0:0:52:0%:96:1E0:39:52:24:28:53 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:43 0/0:0:0:0:0:61:0%:99:1E0:39:61:30:31:62 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:40 0/0:0:0:0:0:56:0%:99:1E0:44:56:30:26:56 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:52 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:44 0/0:0:0:0:0:43:0%:82:1E0:42:43:15:28:45 0/0:0:0:0:0:52:0%:96:1E0:44:52:22:30:52 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 MTB_anc 98698 . C G . PASS AC=14;AF=0.047;AN=300;ANN=G|synonymous_variant|LOW|Rv0090_Rv0090|gene95|transcript|Transcript_gene95|Coding|1/1|c.219C>G|p.Arg73Arg|219/771|219/771|73/256||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.98698C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.98698C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:45:39:15:24:40 0/0:0:0:0:0:25:0%:48:1E0:55:25:10:15:25 0/0:0:0:0:0:44:0%:81:1E0:47:44:15:29:45 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:33 0/0:0:0:0:0:31:0%:59:1E0:50:31:13:18:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:26 0/0:0:0:0:0:61:0%:99:1E0:44:61:26:35:61 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 0/0:0:0:0:0:55:0%:99:1E0:45:55:24:31:55 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:23:11:34 0/0:38:1:1:0:41:2.44%:66:5E-1:46:40:17:23:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:18:0%:32:1E0:50:18:11:7:19 0/0:0:0:0:0:16:0%:29:1E0:45:16:4:12:17 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:8:21:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:38 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:25 0/0:39:1:0:1:33:3.03%:52:5E-1:46:32:16:16:33 0/0:0:0:0:0:43:0%:82:1E0:46:43:14:29:44 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:71:0%:99:1E0:48:71:34:37:72 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:60:1:0:1:47:2.13%:77:5E-1:46:46:22:24:47 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:37 0/0:37:1:1:0:40:2.5%:62:5E-1:45:39:20:19:40 0/0:0:0:0:0:23:0%:44:1E0:42:23:6:17:23 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:45 0/0:0:0:0:0:39:0%:74:1E0:39:39:12:27:39 0/0:0:0:0:0:43:0%:82:1E0:46:43:20:23:44 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:47:0%:89:1E0:44:47:17:30:49 0/0:0:0:0:0:18:0%:32:1E0:50:18:5:13:18 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:16:10:26 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:47 0/0:0:0:0:0:38:0%:70:1E0:47:38:26:12:38 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:24 0/0:0:0:0:0:47:0%:89:1E0:47:47:24:23:47 0/0:0:0:0:0:50:0%:92:1E0:46:50:23:27:51 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:48 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:0:0:0:0:50:0%:92:1E0:44:50:21:29:51 0/0:0:0:0:0:17:0%:33:1E0:49:17:11:6:17 0/0:0:0:0:0:57:0%:99:1E0:48:57:29:28:58 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:24:0%:44:1E0:50:24:14:10:24 0/0:0:0:0:0:43:0%:82:1E0:45:43:13:30:43 0/0:0:0:0:0:19:0%:37:1E0:50:19:6:13:19 0/0:60:1:1:0:19:5.26%:28:5E-1:48:18:8:10:19 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:55:0%:99:1E0:42:55:29:26:56 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:15:0%:29:1E0:47:15:9:6:15 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:0:0:0:0:29:0%:55:1E0:53:29:10:19:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:23:0%:44:1E0:51:23:10:13:23 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:45 0/0:0:0:0:0:28:0%:51:1E0:48:28:18:10:28 0/0:0:0:0:0:45:0%:85:1E0:46:45:19:26:45 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 0/0:0:0:0:0:49:0%:93:1E0:46:49:26:23:49 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:20:11:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:35:16:19:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:10:24:34 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:25:14:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:49:0%:93:1E0:44:49:20:29:50 0/0:0:0:0:0:48:0%:89:1E0:43:48:19:29:49 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:36:1:0:1:39:2.56%:62:5E-1:38:38:18:20:40 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:32 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:43 1/1:39:35:16:19:36:97.22%:99:8.3613E-20:31:1:0:1:36 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:40 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:8:19:28 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:41 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:68:0%:99:1E0:38:68:27:41:68 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:46 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:39 0/0:37:1:1:0:46:2.17%:73:5E-1:44:45:14:31:47 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:39:1:0:1:37:2.7%:59:5E-1:42:36:15:21:37 0/0:0:0:0:0:43:0%:82:1E0:42:43:16:27:44 0/0:0:0:0:0:19:0%:37:1E0:47:19:6:13:19 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:52 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:37 MTB_anc 101038 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|ctpA_Rv0092|gene97|transcript|Transcript_gene97|Coding|1/1|c.456T>C|p.Val152Val|456/2286|456/2286|152/761||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.101038T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.101038T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.101038T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:55 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:21 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:44 0/0:0:0:0:0:12:0%:21:1E0:42:12:4:8:15 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:24 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:35 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:26 0/0:0:0:0:0:40:0%:74:1E0:37:40:22:18:44 0/0:0:0:0:0:12:0%:21:1E0:46:12:7:5:13 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:47 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:34 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:28 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:6:18:26 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:21 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:37:0%:70:1E0:40:37:13:24:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:35 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:22 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:25 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:22 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:37:0%:70:1E0:38:37:11:26:38 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:27 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:42 0/0:0:0:0:0:56:0%:99:1E0:43:56:26:30:58 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:32 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:33 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:19 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:48 0/0:0:0:0:0:39:0%:74:1E0:38:39:20:19:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:37 0/0:0:0:0:0:37:0%:70:1E0:44:37:8:29:39 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:31:0%:59:1E0:36:31:19:12:33 0/0:0:0:0:0:15:0%:29:1E0:45:15:6:9:15 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:26 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:27 0/0:0:0:0:0:36:0%:66:1E0:37:36:14:22:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:31 0/0:0:0:0:0:45:0%:85:1E0:37:45:26:19:45 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:36 0/0:0:0:0:0:46:0%:85:1E0:39:46:24:22:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:48 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:22 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:13:0%:25:1E0:42:13:6:7:15 1/1:49:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:48:0%:89:1E0:38:48:22:26:48 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:30 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:37 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:27 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:39 0/0:0:0:0:0:50:0%:92:1E0:41:50:19:31:51 0/0:0:0:0:0:42:0%:77:1E0:41:42:28:14:44 0/0:0:0:0:0:21:0%:40:1E0:42:21:5:16:22 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:23 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:35 0/0:0:0:0:0:15:0%:29:1E0:42:15:8:7:16 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:34 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:37:0%:70:1E0:37:37:17:20:39 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:37 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:25 0/0:0:0:0:0:46:0%:85:1E0:42:46:16:30:50 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:32 0/0:0:0:0:0:33:0%:63:1E0:38:33:10:23:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:32 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:21 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:18 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:35 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:37 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:22 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:38 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:32 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:26 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:36 0/0:0:0:0:0:28:0%:51:1E0:38:28:18:10:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:19:28:48 0/0:0:0:0:0:53:0%:99:1E0:39:53:24:29:53 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:25 0/0:0:0:0:0:23:0%:44:1E0:36:23:13:10:23 0/0:0:0:0:0:42:0%:77:1E0:37:42:24:18:43 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:32 0/0:0:0:0:0:28:0%:51:1E0:36:28:17:11:32 0/0:0:0:0:0:25:0%:48:1E0:35:25:17:8:29 0/0:0:0:0:0:41:0%:78:1E0:37:41:27:14:42 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:26 0/0:0:0:0:0:32:0%:59:1E0:38:32:21:11:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:28 0/0:0:0:0:0:47:0%:89:1E0:37:47:27:20:49 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:26 0/0:0:0:0:0:21:0%:40:1E0:35:21:12:9:23 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:24 0/0:0:0:0:0:45:0%:85:1E0:37:45:26:19:48 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:45 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:27 0/0:0:0:0:0:43:0%:82:1E0:38:43:25:18:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:23 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:45 0/0:0:0:0:0:44:0%:81:1E0:38:44:29:15:49 0/0:0:0:0:0:35:0%:67:1E0:38:35:20:15:37 MTB_anc 101052 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|ctpA_Rv0092|gene97|transcript|Transcript_gene97|Coding|1/1|c.470C>G|p.Ala157Gly|470/2286|470/2286|157/761||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.101052C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.101052C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.101052C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:43:56:21:35:59 0/0:0:0:0:0:19:0%:37:1E0:49:19:7:12:21 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:46 0/0:0:0:0:0:15:0%:29:1E0:43:15:6:9:15 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:36 0/0:0:0:0:0:22:0%:40:1E0:39:22:5:17:23 0/0:0:0:0:0:30:0%:55:1E0:50:30:10:20:30 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:24 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:42 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:16 0/0:0:0:0:0:47:0%:89:1E0:45:47:18:29:48 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:36 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:37 0/0:0:0:0:0:20:0%:36:1E0:42:20:6:14:20 0/0:0:0:0:0:30:0%:55:1E0:42:30:6:24:33 0/0:0:0:0:0:22:0%:40:1E0:44:22:6:16:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:43 0/0:38:1:0:1:28:3.57%:41:5E-1:44:27:15:12:28 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:40 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:32 0/0:0:0:0:0:42:0%:77:1E0:40:42:12:30:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:42 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:34 0/0:0:0:0:0:45:0%:85:1E0:40:45:20:25:47 0/0:0:0:0:0:59:0%:99:1E0:44:59:26:33:62 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:44 0/0:0:0:0:0:39:0%:74:1E0:44:39:13:26:41 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:37 0/0:0:0:0:0:39:0%:74:1E0:42:39:14:25:39 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:20 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:36 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:42 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:43 0/0:0:0:0:0:43:0%:82:1E0:43:43:11:32:44 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:37 0/0:0:0:0:0:15:0%:29:1E0:49:15:6:9:15 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:28 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:26 0/0:0:0:0:0:47:0%:89:1E0:40:47:13:34:47 0/0:0:0:0:0:41:0%:78:1E0:38:41:19:22:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:9:21:32 0/0:0:0:0:0:45:0%:85:1E0:39:45:24:21:48 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:50 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:39 0/0:0:0:0:0:49:0%:93:1E0:44:49:22:27:51 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:38 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:39 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:35 0/0:0:0:0:0:16:0%:29:1E0:43:16:7:9:16 0/0:0:0:0:0:37:0%:70:1E0:49:37:12:25:38 0/0:0:0:0:0:46:0%:85:1E0:39:46:22:24:47 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:30 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:43 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:42 0/0:0:0:0:0:50:0%:92:1E0:43:50:15:35:52 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:48 0/0:0:0:0:0:21:0%:40:1E0:46:21:6:15:24 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:27 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:37 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:11:24:36 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:18 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:42:0%:77:1E0:41:42:14:28:44 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:30 0/0:0:0:0:0:47:0%:89:1E0:42:47:16:31:48 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:38 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:9:18:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:26 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:21 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:32 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:27 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:48 0/0:0:0:0:0:40:0%:74:1E0:38:40:17:23:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:38:1:0:1:37:2.7%:59:5E-1:45:36:20:16:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:33 0/0:60:1:1:0:51:1.96%:84:5E-1:42:50:20:30:53 0/0:0:0:0:0:50:0%:92:1E0:39:50:24:26:50 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:28 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 0/0:0:0:0:0:43:0%:82:1E0:38:43:25:18:45 0/0:0:0:0:0:30:0%:55:1E0:37:30:17:13:34 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:37 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:32 0/0:0:0:0:0:47:0%:89:1E0:38:47:23:24:49 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:29 0/0:0:0:0:0:50:0%:92:1E0:40:50:29:21:50 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:32 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:30 0/0:0:0:0:0:65:0%:99:1E0:37:65:27:38:65 0/0:0:0:0:0:48:0%:89:1E0:41:48:19:29:49 0/0:24:1:0:1:30:3.33%:44:5E-1:38:29:11:18:32 0/0:0:0:0:0:52:0%:96:1E0:38:52:26:26:52 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:39:34:10:24:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:43 0/0:0:0:0:0:53:0%:99:1E0:40:53:29:24:58 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:41 MTB_anc 103387 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0093c_Rv0093c|gene98|transcript|Transcript_gene98|Coding|1/1|c.277G>C|p.Ala93Pro|277/849|277/849|93/282||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.103387C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.103387C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:24:14:10:25:96%:99:2.0568E-13:34:1:1:0:27 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:65:34:31:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:41:20:21:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:46:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:20:13:7:22:90.91%:99:7.2544E-12:0:0:0:0:22 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:34:22:12:35:97.14%:99:3.5146E-20:0:0:0:0:37 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:28:24:4:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:9:20:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:38:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:60:30:30:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:35:17:18:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:40:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 MTB_anc 103600 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0093c_Rv0093c|gene98|transcript|Transcript_gene98|Coding|1/1|c.64C>T|p.Arg22Cys|64/849|64/849|22/282||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.103600G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.103600G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:23:9:14:24:95.83%:99:7.7525E-13:38:1:0:1:24 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:38:23:15:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:46:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:53:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:52:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:46:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:54:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 MTB_anc 104065 . T G . PASS AC=2;AF=1.00;AN=2;ANN=G|missense_variant|MODERATE|Rv0094c_Rv0094c|gene99|transcript|Transcript_gene99|Coding|1/1|c.599A>C|p.Lys200Thr|599/954|599/954|200/317||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.104065T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.104065T>G||||||;HET=0;WT=0;set=filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 104712 . T C . PASS AC=21;AF=0.070;AN=298;ANN=C|intergenic_region|MODIFIER|Rv0094c_Rv0094c-Rv0095c_Rv0095c|gene99-gene100|intergenic_region|gene99-gene100|||n.104712T>C||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:36 0/0:0:0:0:0:11:0%:22:1E0:49:11:6:5:11 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:17:0%:33:1E0:44:17:12:5:18 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:22 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:60:1:0:1:15:6.67%:21:5E-1:46:14:9:5:16 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:12:0%:21:1E0:46:12:11:1:13 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:15:0%:29:1E0:44:15:13:2:15 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:19 0/0:0:0:0:0:10:0%:17:1E0:44:10:6:4:10 1/1:47:22:12:10:23:95.65%:99:2.9149E-12:39:1:1:0:23 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:22 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:29 0/0:60:1:1:0:15:6.67%:21:5E-1:43:14:11:3:15 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:18 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:17 1/1:42:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:14:0%:25:1E0:43:14:5:9:14 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:30:0%:55:1E0:47:30:10:20:31 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:47 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:19 0/0:0:0:0:0:16:0%:29:1E0:43:16:11:5:16 0/0:60:1:1:0:29:3.45%:45:5E-1:41:28:15:13:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:38 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:18 0/0:0:0:0:0:16:0%:29:1E0:41:16:4:12:16 0/0:0:0:0:0:33:0%:63:1E0:38:33:9:24:33 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:20 0/0:0:0:0:0:19:0%:37:1E0:45:19:14:5:19 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:16 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:29 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:24 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:10:0%:17:1E0:39:10:1:9:11 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:17:0%:33:1E0:40:17:5:12:17 0/0:0:0:0:0:14:0%:25:1E0:44:14:9:5:14 0/0:0:0:0:0:24:0%:44:1E0:48:24:17:7:24 0/0:38:1:1:0:20:5%:27:5E-1:40:19:12:7:21 0/0:0:0:0:0:16:0%:29:1E0:43:16:9:7:16 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:23 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:17 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:24 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:37:1:1:0:29:3.45%:45:5E-1:44:28:13:15:29 0/0:37:1:1:0:14:7.14%:17:5E-1:47:13:5:8:16 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:12:0%:21:1E0:54:12:6:6:12 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:18 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:40 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:24 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:60:1:1:0:25:4%:38:5E-1:40:24:14:10:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:16 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:14:0%:25:1E0:36:14:8:6:15 0/0:0:0:0:0:15:0%:29:1E0:37:15:10:5:15 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:20 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:30 0/0:0:0:0:0:10:0%:17:1E0:38:10:9:1:10 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:29 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:32 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:28 0/0:0:0:0:0:15:0%:29:1E0:45:15:11:4:16 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:9:19:29 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:37 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:12:0%:21:1E0:40:12:7:5:13 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:26 0/1:35:14:5:9:24:58.33%:53:4.0663E-6:40:10:6:4:25 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:34 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:29 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:24 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:36:28:12:16:28 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:22 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:27 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:23 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:15 0/0:0:0:0:0:21:0%:40:1E0:39:21:6:15:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:38:38:18:20:38 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:26 MTB_anc 104824 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.392T>G|p.Ile131Ser|392/411|392/411|131/136||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.104824A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.104824A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:51:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:44:21:23:45:97.78%:99:4.4304E-25:38:1:0:1:45 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:14:12:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:33:20:13:34:97.06%:99:1.2301E-18:38:1:0:1:35 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:18:13:32:96.88%:99:1.8007E-17:34:1:1:0:32 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:51:22:29:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:39:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 MTB_anc 104838 . G T . PASS AC=279;AF=0.930;AN=300;ANN=T|missense_variant|MODERATE|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.378C>A|p.Asp126Glu|378/411|378/411|126/136||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.104838G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.104838G>T||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:50:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:24:13:11:25:96%:99:2.0568E-13:35:1:0:1:25 1/1:51:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 1/1:50:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:37:1:1:0:28:3.57%:41:5E-1:47:27:12:15:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 1/1:41:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:26 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:10:22:32 1/1:44:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:60:25:35:60:100%:99:1.035E-35:0:0:0:0:60 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:43 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 1/1:42:42:20:22:43:97.67%:99:6.6289E-24:38:1:0:1:44 1/1:38:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:48:17:31:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:53:18:35:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:43 0/1:42:13:8:5:36:36.11%:44:3.2589E-5:40:23:10:13:37 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 MTB_anc 104915 . T C . PASS AC=21;AF=0.070;AN=300;ANN=C|missense_variant|MODERATE|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.301A>G|p.Thr101Ala|301/411|301/411|101/136||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.104915T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.104915T>C||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:42:56:29:27:56 0/0:0:0:0:0:23:0%:44:1E0:52:23:10:13:23 0/0:0:0:0:0:47:0%:89:1E0:45:47:29:18:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:26 0/0:0:0:0:0:23:0%:44:1E0:48:23:7:16:24 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:33 0/0:0:0:0:0:27:0%:52:1E0:51:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:34 0/0:0:0:0:0:33:0%:63:1E0:50:33:12:21:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:35 0/0:0:0:0:0:14:0%:25:1E0:49:14:5:9:14 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:45 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 1/1:44:22:11:11:23:95.65%:99:2.9149E-12:32:1:1:0:24 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:56 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:30:0%:55:1E0:47:30:11:19:30 1/1:51:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:37:0%:70:1E0:45:37:12:25:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:38 0/0:0:0:0:0:49:0%:93:1E0:44:49:21:28:51 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:35 0/0:0:0:0:0:51:0%:97:1E0:44:51:22:29:52 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:54:0%:99:1E0:43:54:21:33:55 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:22 0/0:0:0:0:0:24:0%:44:1E0:42:24:5:19:24 0/0:39:1:0:1:37:2.7%:59:5E-1:43:36:14:22:37 0/0:0:0:0:0:31:0%:59:1E0:49:31:20:11:31 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:45 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:39 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:42 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:37:1:0:1:30:3.33%:44:5E-1:42:29:14:15:30 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:44:0%:81:1E0:43:44:28:16:46 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:41 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:39:0%:74:1E0:48:39:18:21:41 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:53 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:21:17:41 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:52 0/0:0:0:0:0:36:0%:66:1E0:50:36:15:21:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:36:0%:66:1E0:52:36:18:18:36 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:23 0/0:60:1:0:1:35:2.86%:55:5E-1:42:34:18:16:36 0/0:52:1:0:1:44:2.27%:69:5E-1:41:43:21:22:47 0/0:36:1:0:1:28:3.57%:41:5E-1:41:27:11:16:28 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:10:25:35 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:18 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:29 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:45:0%:85:1E0:48:45:20:25:46 0/0:0:0:0:0:26:0%:47:1E0:49:26:10:16:26 0/0:0:0:0:0:58:0%:99:1E0:40:58:29:29:59 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:38:1:0:1:47:2.13%:77:5E-1:44:46:24:22:48 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:37 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:46 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:28 0/0:0:0:0:0:26:0%:47:1E0:48:26:16:10:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:44:0%:81:1E0:37:44:25:19:47 0/0:0:0:0:0:43:0%:82:1E0:41:43:29:14:45 0/0:0:0:0:0:40:0%:74:1E0:38:40:18:22:44 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:37 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:52:0%:96:1E0:42:52:22:30:54 0/0:0:0:0:0:54:0%:99:1E0:44:54:19:35:55 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:47:0%:89:1E0:41:47:29:18:52 0/1:43:21:12:9:33:63.64%:83:3.9837E-9:41:12:9:3:35 0/0:0:0:0:0:57:0%:99:1E0:40:57:20:37:60 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:40 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:47 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:33 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:45 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:33 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:26 0/0:0:0:0:0:46:0%:85:1E0:38:46:16:30:46 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:47:0%:89:1E0:38:47:19:28:48 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:9:20:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:51:0%:97:1E0:46:51:19:32:53 0/0:0:0:0:0:57:0%:99:1E0:41:57:29:28:57 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:45 MTB_anc 104919 . G A . PASS AC=21;AF=0.070;AN=300;ANN=A|synonymous_variant|LOW|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.297C>T|p.Leu99Leu|297/411|297/411|99/136||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.104919G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.104919G>A||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:55 0/0:0:0:0:0:21:0%:40:1E0:53:21:10:11:21 0/0:0:0:0:0:48:0%:89:1E0:46:48:30:18:48 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:48:25:6:19:25 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:20 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:32 0/0:0:0:0:0:31:0%:59:1E0:51:31:10:21:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:13:0%:25:1E0:53:13:5:8:13 0/0:0:0:0:0:44:0%:81:1E0:47:44:25:19:46 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:20:0%:36:1E0:50:20:12:8:20 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 1/1:43:23:11:12:24:95.83%:99:7.7525E-13:35:1:1:0:24 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:55:0%:99:1E0:43:55:29:26:56 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:25 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:42 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:49:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:35 0/0:0:0:0:0:31:0%:59:1E0:48:31:11:20:31 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:35:0%:67:1E0:47:35:12:23:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:39 0/0:0:0:0:0:50:0%:92:1E0:44:50:22:28:50 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:35 0/0:0:0:0:0:53:0%:99:1E0:45:53:22:31:54 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:54:0%:99:1E0:44:54:23:31:55 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:5:19:24 0/0:38:1:0:1:35:2.86%:55:5E-1:44:34:14:20:36 0/0:0:0:0:0:31:0%:59:1E0:50:31:20:11:31 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:37:0%:70:1E0:49:37:16:21:37 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:23 0/0:0:0:0:0:41:0%:78:1E0:45:41:14:27:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:45:0%:85:1E0:44:45:28:17:46 0/0:0:0:0:0:41:0%:78:1E0:50:41:22:19:41 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:38 0/0:39:1:1:0:34:2.94%:51:5E-1:46:33:15:18:34 0/0:0:0:0:0:41:0%:78:1E0:47:41:18:23:41 0/0:0:0:0:0:53:0%:99:1E0:43:53:24:29:53 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:37:1:1:0:27:3.7%:41:5E-1:47:26:16:10:27 0/0:49:2:0:2:52:3.85%:74:2.4757E-1:44:50:27:23:52 0/0:0:0:0:0:37:0%:70:1E0:50:37:14:23:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:35:0%:67:1E0:52:35:18:17:35 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:45 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:23 0/0:60:1:0:1:36:2.78%:55:5E-1:44:35:18:17:36 0/0:60:1:0:1:45:2.22%:73:5E-1:42:44:22:22:45 0/0:35:1:0:1:28:3.57%:41:5E-1:43:27:11:16:28 0/0:60:1:0:1:27:3.7%:41:5E-1:47:26:15:11:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:10:24:34 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:39:1:1:0:30:3.33%:44:5E-1:47:29:15:14:30 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:34 0/0:0:0:0:0:46:0%:85:1E0:49:46:20:26:46 0/0:0:0:0:0:25:0%:48:1E0:51:25:10:15:26 0/0:0:0:0:0:62:0%:99:1E0:40:62:32:30:62 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:39 0/0:39:1:0:1:48:2.08%:76:5E-1:44:47:25:22:48 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:38 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:45 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 0/0:37:1:0:1:30:3.33%:44:5E-1:48:29:16:13:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:48:35:20:15:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:45:0%:85:1E0:39:45:26:19:47 0/0:0:0:0:0:42:0%:77:1E0:45:42:28:14:46 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:44 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:37 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:52:0%:96:1E0:44:52:21:31:52 0/0:0:0:0:0:55:0%:99:1E0:46:55:20:35:55 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:51:0%:97:1E0:42:51:31:20:53 0/1:45:21:11:10:34:61.76%:83:4.9442E-9:45:13:9:4:35 0/0:0:0:0:0:58:0%:99:1E0:41:58:21:37:60 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:27 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:34:1:1:0:26:3.85%:38:5E-1:38:25:11:14:26 0/0:0:0:0:0:46:0%:85:1E0:39:46:15:31:46 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:38 0/0:0:0:0:0:48:0%:89:1E0:39:48:18:30:48 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 0/0:33:1:1:0:28:3.57%:41:5E-1:42:27:17:10:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:52:0%:96:1E0:46:52:21:31:52 0/0:0:0:0:0:57:0%:99:1E0:42:57:28:29:57 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:45 MTB_anc 104941 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.275G>A|p.Gly92Glu|275/411|275/411|92/136||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.104941C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.104941C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:54:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:54:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:51:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:24:12:12:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:10:19:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:51:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:11:13:25:96%:99:2.0568E-13:33:1:1:0:25 1/1:43:43:21:22:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:39:21:18:40:97.5%:99:3.8137E-22:38:1:1:0:40 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:44:21:23:45:97.78%:99:4.4304E-25:60:1:0:1:45 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:50:34:16:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:55:18:37:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 104942 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.274G>C|p.Gly92Arg|274/411|274/411|92/136||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.104942C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.104942C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:53:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:54:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:24:12:12:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:31:13:18:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:40:17:23:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:44:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:29:10:19:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:51:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:11:13:25:96%:99:2.0568E-13:37:1:1:0:25 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:39:21:18:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:39:18:21:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:44:21:23:45:97.78%:99:4.4304E-25:60:1:0:1:45 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:7:20:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:49:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:48:32:16:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:55:18:37:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:32 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:37:20:17:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 MTB_anc 104944 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.272T>C|p.Val91Ala|272/411|272/411|91/136||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.104944A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.104944A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:53:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:47:27:20:48:97.92%:99:6.1512E-28:0:0:0:0:49 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:53:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:15:6:9:16:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:50 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:45:38:17:21:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:12:12:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:49:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:29 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:46:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:8:19:28:96.43%:99:3.7915E-15:48:1:0:1:30 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:49:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:10:13:24:95.83%:99:7.7525E-13:34:1:1:0:25 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:19:12:32:96.88%:99:2.1486E-18:0:0:0:0:35 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:45:23:22:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:48:36:13:23:37:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:45:21:24:46:97.83%:99:1.1441E-25:59:1:0:1:47 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:45 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:40 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:52 1/1:43:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:50 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:41:54:16:38:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:37 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:58 1/1:43:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 MTB_anc 104962 . G A . PASS AC=21;AF=0.070;AN=300;ANN=A|missense_variant|MODERATE|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.254C>T|p.Ala85Val|254/411|254/411|85/136||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.104962G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.104962G>A||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:43:59:35:24:59 0/0:0:0:0:0:18:0%:32:1E0:53:18:10:8:18 0/0:0:0:0:0:51:0%:97:1E0:46:51:27:24:52 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:8:21:29 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:19:0%:37:1E0:47:19:5:14:19 0/0:38:1:1:0:30:3.33%:44:5E-1:50:29:13:16:30 0/0:0:0:0:0:26:0%:47:1E0:50:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:35 0/0:0:0:0:0:22:0%:40:1E0:50:22:8:14:22 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:18:0%:32:1E0:51:18:11:7:18 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:51 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:60:2:1:1:28:7.14%:34:2.4545E-1:47:26:12:14:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:13:0%:25:1E0:49:13:6:7:13 0/0:60:1:1:0:24:4.17%:34:5E-1:47:23:12:11:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:33 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:34:0%:62:1E0:51:34:12:22:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:50 0/0:0:0:0:0:38:0%:70:1E0:47:38:13:25:38 0/0:0:0:0:0:48:0%:89:1E0:45:48:19:29:48 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:58:0%:99:1E0:44:58:23:35:58 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:24 0/0:0:0:0:0:25:0%:48:1E0:41:25:6:19:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:36 0/0:0:0:0:0:28:0%:51:1E0:52:28:17:11:28 1/1:51:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:60:1:0:1:38:2.63%:58:5E-1:48:37:18:19:38 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:19 0/0:0:0:0:0:38:0%:70:1E0:46:38:13:25:39 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:38:1:1:0:23:4.35%:34:5E-1:46:22:9:13:23 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:48 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:45 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:45 0/0:0:0:0:0:45:0%:85:1E0:48:45:23:22:45 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:33 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:54:0%:99:1E0:45:54:24:30:55 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:39 0/0:37:1:1:0:23:4.35%:34:5E-1:46:22:8:14:23 0/0:60:2:2:0:33:6.06%:44:2.4615E-1:47:31:18:13:33 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:48 0/0:0:0:0:0:39:0%:74:1E0:49:39:16:23:39 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:38:1:1:0:37:2.7%:59:5E-1:48:36:15:21:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:19 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:60:1:0:1:47:2.13%:77:5E-1:43:46:20:26:49 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:23 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:9:20:29 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:16 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:29 0/0:38:1:1:0:47:2.13%:77:5E-1:48:46:17:29:47 0/0:0:0:0:0:27:0%:52:1E0:50:27:9:18:29 0/0:0:0:0:0:60:0%:99:1E0:39:60:31:29:60 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:46 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:46 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:30 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:15:24:39 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:20 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:46 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:44 0/0:37:1:0:1:41:2.44%:66:5E-1:41:40:18:22:43 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:21 0/0:0:0:0:0:60:0%:99:1E0:44:60:32:28:60 0/0:0:0:0:0:53:0%:99:1E0:45:53:20:33:55 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:49:0%:93:1E0:39:49:32:17:49 0/1:43:21:14:7:34:61.76%:83:4.9442E-9:43:13:8:5:35 0/0:0:0:0:0:59:0%:99:1E0:42:59:18:41:61 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:37 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:46 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:38:1:1:0:53:1.89%:88:5E-1:40:52:21:31:53 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:45 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:46 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:10:22:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:44:0%:81:1E0:46:44:19:25:44 0/0:0:0:0:0:49:0%:93:1E0:46:49:23:26:49 0/0:0:0:0:0:60:0%:99:1E0:43:60:30:30:60 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:42 MTB_anc 105045 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.171G>C|p.Glu57Asp|171/411|171/411|57/136||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.105045C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.105045C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:60:35:25:60:100%:99:1.035E-35:0:0:0:0:60 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:9:17:27:96.3%:99:1.4382E-14:60:1:0:1:28 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:52:27:12:15:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:54:25:10:15:26:96.15%:99:5.4444E-14:38:1:0:1:27 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:32 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:52:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:64:28:36:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:27:16:11:28:96.43%:99:3.7915E-15:39:1:1:0:28 1/1:49:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:20:11:9:22:90.91%:98:1.3117E-10:48:2:1:1:23 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:38:21:17:39:97.44%:99:1.4697E-21:60:1:0:1:40 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:54:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:14:19:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:60:19:41:60:100%:99:1.035E-35:0:0:0:0:60 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 105060 . G A . PASS AC=21;AF=0.070;AN=300;ANN=A|synonymous_variant|LOW|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.156C>T|p.Asp52Asp|156/411|156/411|52/136||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.105060G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.105060G>A||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:42:59:35:24:59 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:49 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:49:2:0:2:28:7.14%:34:2.4545E-1:45:26:9:17:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:51:30:12:18:31 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:32 0/0:39:1:0:1:27:3.7%:41:5E-1:52:26:11:15:27 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:18:0%:32:1E0:51:18:10:8:18 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:19:0%:37:1E0:46:19:6:13:19 1/1:48:21:8:13:22:95.45%:99:1.0931E-11:34:1:0:1:22 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:56:0%:99:1E0:43:56:27:29:58 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:45 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:15 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:33 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:37:0%:70:1E0:49:37:11:26:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 1/1:50:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:45 0/0:60:1:0:1:64:1.56%:99:5E-1:46:63:28:35:65 0/0:0:0:0:0:40:0%:74:1E0:48:40:15:25:41 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:44 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:47:0%:89:1E0:47:47:21:26:48 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:39:1:0:1:28:3.57%:41:5E-1:42:27:9:18:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:38:1:1:0:29:3.45%:45:5E-1:44:28:17:11:29 1/1:49:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:41:0%:78:1E0:48:41:20:21:41 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:50:3:2:1:27:11.11%:28:1.1792E-1:43:24:12:12:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:47 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:60:1:0:1:39:2.56%:62:5E-1:44:38:22:16:39 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:59:0%:99:1E0:48:59:33:26:61 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:48:0%:89:1E0:48:48:24:24:48 0/0:0:0:0:0:28:0%:51:1E0:53:28:15:13:28 0/0:0:0:0:0:28:0%:51:1E0:50:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:32 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:21 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:33 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:46 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:25 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:27 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:17:0%:33:1E0:52:17:8:9:18 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:46:0%:85:1E0:46:46:21:25:46 0/0:0:0:0:0:33:0%:63:1E0:48:33:8:25:33 0/0:0:0:0:0:52:0%:96:1E0:40:52:31:21:54 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:45 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:15:28:43 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:38:0%:70:1E0:47:38:26:12:38 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:37:1:1:0:29:3.45%:45:5E-1:47:28:8:20:29 0/0:0:0:0:0:20:0%:36:1E0:39:20:6:14:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:42 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:51 0/0:38:1:0:1:32:3.12%:48:5E-1:39:31:16:15:36 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:29 0/0:0:0:0:0:58:0%:99:1E0:46:58:34:24:59 0/0:0:0:0:0:50:0%:92:1E0:45:50:25:25:50 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:34 0/0:0:0:0:0:52:0%:96:1E0:40:52:31:21:52 0/1:41:27:17:10:41:65.85%:99:1.0249E-11:41:14:7:7:41 0/0:0:0:0:0:57:0%:99:1E0:42:57:18:39:58 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:45 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:48 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:38 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:55:0%:99:1E0:40:55:24:31:55 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:42 0/0:60:1:0:1:41:2.44%:66:5E-1:43:40:24:16:42 0/0:0:0:0:0:41:0%:78:1E0:41:41:14:27:41 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:49:0%:93:1E0:46:49:24:25:50 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:50 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:54 0/0:0:0:0:0:41:0%:78:1E0:41:41:13:28:41 MTB_anc 105063 . G A . PASS AC=21;AF=0.070;AN=300;ANN=A|synonymous_variant|LOW|Rv0095c_Rv0095c|gene100|transcript|Transcript_gene100|Coding|1/1|c.153C>T|p.Phe51Phe|153/411|153/411|51/136||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.105063G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.105063G>A||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:58:0%:99:1E0:42:58:34:24:58 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:50:0%:92:1E0:45:50:26:24:50 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:49:2:0:2:28:7.14%:34:2.4545E-1:48:26:9:17:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:31 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:52:30:13:17:32 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:39:1:0:1:27:3.7%:41:5E-1:52:26:11:15:27 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:43 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:18:0%:32:1E0:51:18:10:8:18 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:29 0/0:0:0:0:0:19:0%:37:1E0:46:19:6:13:19 1/1:49:20:7:13:21:95.24%:99:4.0873E-11:38:1:0:1:21 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:56:0%:99:1E0:43:56:26:30:59 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:46:0%:85:1E0:46:46:24:22:46 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:14:0%:25:1E0:42:14:8:6:15 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:37:0%:70:1E0:49:37:11:26:37 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 1/1:50:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:45 0/0:0:0:0:0:66:0%:99:1E0:47:66:30:36:66 0/0:0:0:0:0:41:0%:78:1E0:48:41:16:25:41 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:43 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:47:0%:89:1E0:47:47:21:26:48 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:39:1:0:1:27:3.7%:41:5E-1:43:26:8:18:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:60:1:1:0:29:3.45%:45:5E-1:44:28:17:11:29 1/1:49:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:42:0%:77:1E0:49:42:21:21:42 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:60:2:1:1:25:8%:31:2.449E-1:44:23:12:11:27 0/0:39:1:1:0:43:2.33%:70:5E-1:43:42:20:22:43 0/0:0:0:0:0:48:0%:89:1E0:44:48:20:28:49 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:60:1:0:1:40:2.5%:62:5E-1:44:39:22:17:40 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:60:0%:99:1E0:48:60:33:27:60 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:47:0%:89:1E0:49:47:24:23:48 0/0:0:0:0:0:28:0%:51:1E0:52:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:50:27:16:11:27 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:39:1:0:1:22:4.55%:31:5E-1:42:21:10:11:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:33 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:28 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:19:0%:37:1E0:51:19:9:10:19 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:34 0/0:0:0:0:0:46:0%:85:1E0:46:46:21:25:46 0/0:0:0:0:0:33:0%:63:1E0:47:33:8:25:33 0/0:0:0:0:0:54:0%:99:1E0:40:54:32:22:55 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:42 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:43 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:37 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:42 0/0:0:0:0:0:38:0%:70:1E0:47:38:26:12:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:43 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:29:0%:55:1E0:48:29:9:20:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:6:15:21 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:43 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:51 0/0:39:1:0:1:34:2.94%:51:5E-1:40:33:17:16:36 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:58:0%:99:1E0:46:58:34:24:59 0/0:0:0:0:0:52:0%:96:1E0:44:52:26:26:52 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:52:0%:96:1E0:41:52:30:22:53 0/1:43:25:16:9:39:64.1%:99:8.8326E-11:42:14:7:7:41 0/0:0:0:0:0:57:0%:99:1E0:42:57:18:39:59 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:48 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:42 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:55:0%:99:1E0:40:55:24:31:55 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:41:0%:78:1E0:41:41:14:27:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:45 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:48:0%:89:1E0:46:48:23:25:49 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:51 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:54 0/0:0:0:0:0:41:0%:78:1E0:41:41:13:28:41 MTB_anc 107485 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0097_Rv0097|gene102|transcript|Transcript_gene102|Coding|1/1|c.752T>C|p.Ile251Thr|752/870|752/870|251/289||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.107485T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.107485T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:52:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:51:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:67:34:33:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:48:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:23:9:14:24:95.83%:99:7.7525E-13:38:1:0:1:24 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:51:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:49:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:25:12:13:27:92.59%:99:2.0853E-13:35:2:2:0:27 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:61:39:22:61:100%:99:2.609E-36:0:0:0:0:62 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:63:32:31:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:64:26:38:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:42:19:23:43:97.67%:99:5.9562E-25:0:0:0:0:44 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:15:19:35:97.14%:99:3.2089E-19:39:1:1:0:35 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:69:32:37:69:100%:99:4.233E-41:0:0:0:0:69 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 108155 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|fcoT_Rv0098-fadD10_Rv0099|gene103-gene104|intergenic_region|gene103-gene104|||n.108155A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:51:18:33:52:98.08%:99:2.5024E-30:0:0:0:0:53 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:22:11:11:23:95.65%:99:4.7526E-13:0:0:0:0:25 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:42:20:22:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:9:3:6:10:90%:46:2.0568E-5:0:0:0:0:10 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:38:35:7:28:36:97.22%:99:8.3613E-20:32:1:1:0:38 1/1:37:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:61:17:44:61:100%:99:2.609E-36:0:0:0:0:61 1/1:37:36:7:29:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 112596 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|nrp_Rv0101|gene106|transcript|Transcript_gene106|Coding|1/1|c.2596A>G|p.Ser866Gly|2596/7539|2596/7539|866/2512||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.112596A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.112596A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:46:33:13:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:50:21:29:51:98.04%:99:9.9117E-30:0:0:0:0:52 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:52:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:56:36:20:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:48 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:68 1/1:43:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:69:35:34:69:100%:99:4.233E-41:0:0:0:0:72 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:42:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:39:8:31:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:49:31:18:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 MTB_anc 114179 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|nrp_Rv0101|gene106|transcript|Transcript_gene106|Coding|1/1|c.4179C>T|p.Thr1393Thr|4179/7539|4179/7539|1393/2512||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.114179C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.114179C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 0/0:0:0:0:0:39:0%:74:1E0:48:39:12:27:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:17 0/0:0:0:0:0:34:0%:62:1E0:48:34:13:21:34 0/0:0:0:0:0:18:0%:32:1E0:48:18:12:6:18 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:26:0%:47:1E0:51:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:49:34:17:17:35 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:38 0/0:0:0:0:0:18:0%:32:1E0:54:18:11:7:18 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:21:0%:40:1E0:47:21:6:15:21 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:19 0/0:0:0:0:0:48:0%:89:1E0:46:48:23:25:48 0/0:0:0:0:0:28:0%:51:1E0:48:28:18:10:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:49:34:20:14:34 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:37:1:1:0:31:3.23%:48:5E-1:43:30:12:18:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:60:1:0:1:34:2.94%:51:5E-1:45:33:20:13:34 0/0:0:0:0:0:70:0%:99:1E0:47:70:30:40:71 0/0:0:0:0:0:42:0%:77:1E0:48:42:22:20:44 0/0:0:0:0:0:41:0%:78:1E0:49:41:17:24:43 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:17 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:38 0/0:0:0:0:0:32:0%:59:1E0:50:32:11:21:32 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:40 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:21 0/0:0:0:0:0:55:0%:99:1E0:43:55:23:32:55 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:47:0%:89:1E0:49:47:21:26:47 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:24 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:58:0%:99:1E0:45:58:28:30:58 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:50:1:1:0:24:4.17%:34:5E-1:48:23:14:9:26 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:37 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:26 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:37:0%:70:1E0:50:37:16:21:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:36 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:26 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:21 0/0:0:0:0:0:34:0%:62:1E0:48:34:13:21:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:24 0/0:0:0:0:0:39:0%:74:1E0:45:39:14:25:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:38:1:1:0:31:3.23%:48:5E-1:43:30:13:17:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:36 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:27 0/0:38:1:0:1:33:3.03%:52:5E-1:48:32:16:16:33 0/0:0:0:0:0:22:0%:40:1E0:52:22:11:11:23 0/0:0:0:0:0:45:0%:85:1E0:41:45:15:30:45 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:10:24:34 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:49:0%:93:1E0:51:49:27:22:51 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:32 0/0:0:0:0:0:22:0%:40:1E0:47:22:6:16:23 0/0:0:0:0:0:27:0%:52:1E0:50:27:9:18:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:18 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:43 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:33 0/0:0:0:0:0:50:0%:92:1E0:39:50:21:29:51 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:56:0%:99:1E0:41:56:22:34:56 0/0:0:0:0:0:52:0%:96:1E0:45:52:18:34:53 1/1:48:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:18 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:50 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:42 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:34 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:37 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:38 0/0:0:0:0:0:44:0%:81:1E0:44:44:14:30:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:41 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:56:0%:99:1E0:41:56:27:29:57 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:40 0/0:0:0:0:0:34:0%:62:1E0:45:34:11:23:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:36 0/0:0:0:0:0:40:0%:74:1E0:42:40:11:29:40 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:18 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:32 0/0:0:0:0:0:47:0%:89:1E0:43:47:16:31:49 0/0:0:0:0:0:57:0%:99:1E0:44:57:27:30:57 0/0:0:0:0:0:49:0%:93:1E0:42:49:29:20:50 MTB_anc 119283 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv0102_Rv0102|gene107|transcript|Transcript_gene107|Coding|1/1|c.1570C>T|p.His524Tyr|1570/1986|1570/1986|524/661||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.119283C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.119283C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:17:30:48 0/0:0:0:0:0:19:0%:37:1E0:50:19:12:7:19 0/0:0:0:0:0:59:0%:99:1E0:46:59:33:26:59 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:19:10:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:25:0%:48:1E0:52:25:10:15:25 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:56 0/0:0:0:0:0:22:0%:40:1E0:38:22:14:8:22 0/0:0:0:0:0:34:0%:62:1E0:47:34:24:10:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:24 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:27 0/0:0:0:0:0:65:0%:99:1E0:45:65:38:27:66 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:25 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:0:0:0:0:42:0%:77:1E0:47:42:18:24:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:50:0%:92:1E0:47:50:27:23:51 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:26 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:41 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 1/1:42:35:19:16:36:97.22%:99:8.3613E-20:60:1:1:0:37 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:44:40:28:12:40 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:45 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:27 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:58:0%:99:1E0:46:58:36:22:58 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:50 0/0:0:0:0:0:30:0%:55:1E0:46:30:21:9:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:64:0%:99:1E0:46:64:35:29:65 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:41:0%:78:1E0:47:41:18:23:41 0/0:0:0:0:0:13:0%:25:1E0:51:13:7:6:13 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:45:0%:85:1E0:50:45:20:25:47 0/0:0:0:0:0:29:0%:55:1E0:52:29:14:15:29 0/0:37:1:0:1:24:4.17%:34:5E-1:48:23:12:11:24 0/0:0:0:0:0:32:0%:59:1E0:50:32:16:16:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:46 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:31 0/0:0:0:0:0:34:0%:62:1E0:50:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:50:33:20:13:34 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:47 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:53:0%:99:1E0:45:53:22:31:53 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:45 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:22:0%:40:1E0:51:22:8:14:22 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:50 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:14 0/0:0:0:0:0:70:0%:99:1E0:42:70:37:33:71 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:45 0/0:0:0:0:0:41:0%:78:1E0:42:41:13:28:41 0/0:0:0:0:0:54:0%:99:1E0:41:54:24:30:58 0/0:0:0:0:0:44:0%:81:1E0:38:44:24:20:46 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:45 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:46 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:41 0/0:0:0:0:0:43:0%:82:1E0:40:43:18:25:45 0/0:0:0:0:0:54:0%:99:1E0:40:54:34:20:55 0/0:0:0:0:0:43:0%:82:1E0:38:43:28:15:43 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:64:0%:99:1E0:38:64:35:29:64 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:39:1:0:1:64:1.56%:99:5E-1:43:62:33:29:64 0/0:38:1:0:1:38:2.63%:58:5E-1:43:37:18:19:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:50 MTB_anc 123520 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0104_Rv0104|gene109|transcript|Transcript_gene109|Coding|1/1|c.1204C>T|p.His402Tyr|1204/1515|1204/1515|402/504||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.123520C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.123520C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:53:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:38:23:15:39:97.44%:99:1.4697E-21:60:1:0:1:39 1/1:51:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:51:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:26:15:11:27:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:40:20:20:41:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:63:36:27:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:13:12:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:28:16:12:29:96.55%:99:9.9776E-16:39:1:1:0:29 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:40:24:16:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:60:22:38:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:70:32:38:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:51 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 125357 . C G . PASS AC=64;AF=0.213;AN=300;ANN=G|missense_variant|MODERATE|Rv0106_Rv0106|gene111|transcript|Transcript_gene111|Coding|1/1|c.984C>G|p.His328Gln|984/1197|984/1197|328/398||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.125357C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.125357C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:31 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:20 1/1:38:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:20:0%:36:1E0:37:20:4:16:20 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:17 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:32 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:22 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:17 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:25 0/0:0:0:0:0:48:0%:89:1E0:37:48:13:35:48 0/0:0:0:0:0:12:0%:21:1E0:41:12:4:8:12 0/0:0:0:0:0:54:0%:99:1E0:36:54:18:36:55 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:17:0%:33:1E0:36:17:6:11:17 0/0:0:0:0:0:22:0%:40:1E0:35:22:12:10:23 0/0:0:0:0:0:20:0%:36:1E0:36:20:5:15:20 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:26:8:18:27:96.3%:99:1.4382E-14:37:1:0:1:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:7:19:29 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:31 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:26 0/0:0:0:0:0:11:0%:22:1E0:39:11:5:6:11 0/0:0:0:0:0:17:0%:33:1E0:34:17:5:12:17 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:15 0/0:0:0:0:0:21:0%:40:1E0:37:21:3:18:21 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:27 1/1:41:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:19:0%:37:1E0:36:19:3:16:20 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:36:21:3:18:21 0/0:0:0:0:0:47:0%:89:1E0:36:47:17:30:50 1/1:37:34:13:21:35:97.14%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:35:0%:67:1E0:36:35:12:23:35 1/1:36:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:33:0%:63:1E0:37:33:16:17:34 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:10 0/0:0:0:0:0:18:0%:32:1E0:38:18:4:14:18 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:26 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:20 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:22 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:25 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:34 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/0:0:0:0:0:35:0%:67:1E0:37:35:10:25:35 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:11:17:28 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:15 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:26 0/0:0:0:0:0:29:0%:55:1E0:35:29:9:20:30 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:26 0/0:0:0:0:0:37:0%:70:1E0:37:37:13:24:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:37:29:7:22:30 0/0:0:0:0:0:42:0%:77:1E0:36:42:15:27:44 0/0:0:0:0:0:21:0%:40:1E0:34:21:5:16:21 0/0:0:0:0:0:42:0%:77:1E0:38:42:14:28:42 0/0:38:1:0:1:52:1.92%:83:5E-1:37:51:20:31:52 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:20 0/0:0:0:0:0:35:0%:67:1E0:37:35:8:27:35 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:17 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:12 0/0:0:0:0:0:39:0%:74:1E0:37:39:9:30:39 0/0:0:0:0:0:28:0%:51:1E0:37:28:6:22:29 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:17 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:26 0/0:0:0:0:0:28:0%:51:1E0:35:28:12:16:29 0/0:0:0:0:0:16:0%:29:1E0:39:16:4:12:17 0/0:0:0:0:0:24:0%:44:1E0:35:24:3:21:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:29 1/1:38:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:12 0/0:0:0:0:0:18:0%:32:1E0:38:18:3:15:18 0/0:0:0:0:0:35:0%:67:1E0:36:35:7:28:36 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:24 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:23 1/1:34:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:15:0%:29:1E0:42:15:4:11:15 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:21 0/0:0:0:0:0:30:0%:55:1E0:37:30:8:22:30 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 0/0:0:0:0:0:34:0%:62:1E0:35:34:9:25:35 0/0:0:0:0:0:23:0%:44:1E0:35:23:8:15:23 0/0:0:0:0:0:48:0%:89:1E0:36:48:17:31:48 0/0:0:0:0:0:18:0%:32:1E0:35:18:3:15:18 0/0:0:0:0:0:21:0%:40:1E0:36:21:3:18:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:6:20:26 0/0:32:1:0:1:36:2.78%:55:5E-1:36:35:13:22:38 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:22 0/0:0:0:0:0:26:0%:47:1E0:38:26:7:19:27 0/0:0:0:0:0:28:0%:51:1E0:35:28:10:18:28 0/0:0:0:0:0:25:0%:48:1E0:34:25:5:20:26 0/0:35:1:0:1:24:4.17%:34:5E-1:36:23:5:18:26 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:37:0%:70:1E0:36:37:12:25:38 0/0:0:0:0:0:21:0%:40:1E0:35:21:6:15:22 0/0:0:0:0:0:28:0%:51:1E0:36:28:9:19:28 0/0:0:0:0:0:29:0%:55:1E0:37:29:10:19:31 0/0:0:0:0:0:24:0%:44:1E0:36:24:6:18:24 0/0:0:0:0:0:22:0%:40:1E0:35:22:7:15:22 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:26 1/1:34:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:29 1/1:38:25:6:19:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:36:39:8:31:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:25:0%:48:1E0:35:25:8:17:27 0/0:0:0:0:0:30:0%:55:1E0:35:30:11:19:33 0/0:0:0:0:0:32:0%:59:1E0:36:32:8:24:32 0/0:0:0:0:0:51:0%:97:1E0:36:51:19:32:53 0/0:0:0:0:0:38:0%:70:1E0:36:38:15:23:38 0/0:0:0:0:0:22:0%:40:1E0:35:22:10:12:22 0/0:0:0:0:0:17:0%:33:1E0:34:17:7:10:17 0/0:0:0:0:0:33:0%:63:1E0:36:33:12:21:37 1/1:35:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:34:9:25:35:97.14%:99:3.2089E-19:38:1:1:0:36 1/1:35:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:36:27:7:20:27 1/1:36:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:38:0%:70:1E0:36:38:13:25:39 0/0:0:0:0:0:47:0%:89:1E0:36:47:15:32:48 1/1:36:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:30:0%:55:1E0:34:30:5:25:30 0/0:0:0:0:0:27:0%:52:1E0:34:27:7:20:28 0/0:0:0:0:0:23:0%:44:1E0:35:23:5:18:23 0/0:0:0:0:0:39:0%:74:1E0:37:39:12:27:41 0/0:0:0:0:0:27:0%:52:1E0:36:27:12:15:28 0/0:0:0:0:0:28:0%:51:1E0:35:28:8:20:29 0/0:0:0:0:0:34:0%:62:1E0:36:34:12:22:36 0/0:0:0:0:0:32:0%:59:1E0:36:32:8:24:32 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:25:0%:48:1E0:35:25:9:16:26 1/1:37:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:35:0%:67:1E0:36:35:10:25:35 0/0:0:0:0:0:48:0%:89:1E0:36:48:13:35:48 0/0:0:0:0:0:27:0%:52:1E0:36:27:8:19:27 MTB_anc 125830 . G GA . PASS AC=296;AF=0.987;AN=300;ANN=GA|frameshift_variant|HIGH|ctpI_Rv0107c|gene112|transcript|Transcript_gene112|Coding|1/1|c.4711dupT|p.Ser1571fs|4711/4899|4711/4899|1571/1632||,GA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.125830_125831insA||||||,GA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.125830_125831insA||||||,GA|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.125830_125831insA||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:40:19:21:43:93.02%:99:2.287E-21:32:3:2:1:43 1/1:48:28:17:11:28:93.33%:99:9.9776E-16:34:1:1:0:29 1/1:47:45:19:26:46:97.83%:99:1.1441E-25:37:1:0:1:47 1/1:45:27:10:17:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:45:25:10:15:26:96.15%:99:5.4444E-14:38:1:1:0:26 1/1:47:33:14:19:35:94.29%:99:5.9366E-18:32:2:2:0:35 1/1:47:33:14:19:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:12:14:28:92.86%:99:5.6872E-14:46:2:0:2:28 1/1:48:26:12:14:27:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:42:38:12:26:37:97.44%:99:1.4697E-21:60:1:1:0:39 1/1:45:60:33:27:62:96.77%:99:1.3256E-33:33:2:0:2:62 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:51:18:7:11:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:46:24:12:12:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:48:26:13:13:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:28:14:14:29:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:45:25:12:13:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:48:25:23:49:97.96%:99:1.9625E-27:33:1:1:0:49 1/1:48:31:15:16:32:96.88%:99:1.8007E-17:37:1:1:0:32 1/1:44:32:14:18:34:94.12%:99:2.2142E-17:35:2:1:1:34 1/1:44:21:8:13:22:95.45%:99:1.0931E-11:38:1:0:1:22 1/1:47:25:8:17:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:44:21:11:10:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:42:20:11:9:22:90.91%:98:1.3117E-10:36:2:1:1:22 1/1:46:33:18:15:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:41:23:8:15:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:11:12:24:95.83%:99:7.7525E-13:34:1:1:0:24 1/1:49:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:13:16:31:93.55%:99:1.1344E-15:48:2:2:0:31 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:23:14:38:97.37%:99:5.6582E-21:37:1:0:1:38 1/1:46:58:24:34:59:98.31%:99:2.4634E-33:37:1:1:0:59 1/1:45:46:22:24:47:97.87%:99:2.9526E-26:60:1:0:1:47 1/1:43:41:22:19:43:93.18%:99:6.1775E-22:51:3:3:0:44 1/1:45:35:12:23:36:97.22%:99:8.3613E-20:31:1:1:0:36 1/1:45:43:18:25:44:97.73%:99:1.7144E-24:32:1:0:1:44 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:23:16:7:24:95.83%:99:7.7525E-13:37:1:0:1:24 1/1:42:28:11:17:29:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:46:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:33:15:18:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:45:33:17:16:33:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:40:34:15:19:32:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:50:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:10:6:4:11:90.91%:47:1.7011E-5:60:1:0:1:11 1/1:45:46:25:21:47:95.83%:99:1.9036E-25:31:2:1:1:48 1/1:44:18:13:5:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:33:21:12:34:97.06%:99:1.2301E-18:38:1:0:1:34 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:37:19:18:38:97.37%:99:5.6582E-21:37:1:0:1:38 0/1:48:24:14:10:27:88.89%:99:7.6222E-13:35:2:2:0:27 1/1:44:35:19:16:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:49:35:20:15:38:92.11%:99:4.2437E-19:48:2:1:1:38 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:20:13:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:18:8:10:17:100%:99:1.1019E-10:0:0:0:0:18 0/1:44:24:10:14:27:88.89%:99:2.0853E-12:34:3:1:2:28 1/1:47:45:23:22:49:91.84%:99:1.1493E-23:33:4:2:2:49 1/1:43:23:11:12:24:95.83%:99:7.7525E-13:28:1:1:0:25 1/1:47:29:14:15:32:90.62%:99:3.5714E-15:51:3:1:2:32 1/1:53:19:7:12:20:95%:98:1.5234E-10:34:1:1:0:20 1/1:47:22:7:15:23:95.65%:99:2.9149E-12:31:1:1:0:23 1/1:48:36:15:21:37:97.3%:99:2.1762E-20:32:1:1:0:37 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:33:16:17:33:94.29%:99:5.9366E-18:40:2:0:2:35 1/1:46:26:9:17:27:96.3%:99:1.4382E-14:24:1:1:0:27 1/1:47:16:6:10:17:94.12%:81:7.7134E-9:33:1:1:0:17 1/1:48:27:11:16:29:93.1%:99:1.5465E-14:47:2:0:2:29 1/1:42:30:22:8:31:96.77%:99:6.8754E-17:32:1:0:1:31 1/1:44:29:19:10:32:90.62%:99:3.5714E-15:32:3:1:2:32 1/1:42:34:15:19:34:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:42:44:18:26:44:97.78%:99:4.4304E-25:34:1:0:1:46 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:25:9:16:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:46:28:11:17:31:90.32%:99:1.2857E-14:32:3:2:1:31 1/1:47:11:8:3:12:91.67%:53:4.8074E-6:32:1:1:0:12 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:33:14:19:34:97.06%:99:1.2301E-18:34:1:1:0:34 1/1:49:27:14:13:29:93.1%:99:1.5465E-14:48:2:0:2:29 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:42:22:20:43:97.67%:99:6.6289E-24:33:1:1:0:43 1/1:45:24:11:13:24:96%:99:2.0568E-13:36:1:0:1:26 1/1:43:34:16:18:36:94.44%:99:1.5887E-18:30:2:2:0:36 1/1:44:35:19:16:36:97.22%:99:8.3613E-20:34:1:1:0:36 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:26:15:11:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:31:14:17:34:91.18%:99:2.7308E-16:35:3:1:2:34 1/1:44:21:8:13:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:15:18:33:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:46:49:25:24:48:100%:99:3.925E-29:0:0:0:0:49 1/1:45:32:13:19:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:43:36:24:12:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:41:20:21:42:97.62%:99:2.5612E-23:37:1:1:0:42 0/1:44:31:20:11:37:83.78%:99:3.4914E-15:35:6:3:3:37 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:14:24:40:95%:99:8.0088E-21:46:2:0:2:40 1/1:41:38:20:18:40:92.68%:99:3.1178E-20:32:3:1:2:41 1/1:41:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:35:16:19:35:97.22%:99:8.3613E-20:31:1:1:0:36 1/1:47:34:20:14:36:94.44%:99:1.5887E-18:36:2:1:1:36 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:55:27:28:57:96.49%:99:1.1048E-30:36:2:2:0:57 1/1:42:57:27:30:59:96.61%:99:7.5133E-32:34:2:1:1:59 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:13:13:27:96.3%:99:1.4382E-14:31:1:1:0:27 1/1:42:55:27:28:56:98.21%:99:1.4593E-31:37:1:1:0:57 1/1:42:41:15:26:42:93.18%:99:6.1775E-22:33:3:2:1:44 1/1:40:45:22:23:48:90%:99:1.1493E-23:35:4:1:3:51 1/1:38:40:17:23:41:95.24%:99:5.6346E-22:35:2:0:2:42 1/1:43:41:23:18:42:95.35%:99:1.4915E-22:29:2:2:0:43 1/1:40:40:15:25:40:97.56%:99:9.8874E-23:33:1:1:0:41 1/1:42:37:13:24:40:92.5%:99:1.1479E-19:31:3:2:1:40 1/1:42:30:17:13:32:93.75%:99:3.0612E-16:34:2:2:0:32 1/1:42:44:24:20:46:95.65%:99:2.7459E-24:33:2:1:1:46 1/1:44:39:21:18:41:95.12%:99:2.1258E-21:33:2:0:2:41 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 0/1:39:27:14:13:32:81.82%:99:4.5192E-13:41:6:4:2:33 1/1:44:40:24:16:41:97.56%:99:9.8874E-23:37:1:1:0:41 1/1:39:57:30:27:57:96.61%:99:7.5133E-32:35:2:2:0:59 1/1:45:39:17:22:41:95.12%:99:2.1258E-21:46:2:1:1:41 1/1:43:33:15:18:35:94.29%:99:5.9366E-18:37:2:1:1:35 1/1:40:42:30:12:44:95.45%:99:3.9431E-23:33:2:1:1:44 1/1:42:34:13:21:35:97.14%:99:3.2089E-19:34:1:1:0:35 1/1:47:17:9:8:18:94.44%:86:2.0936E-9:34:1:1:0:18 1/1:42:39:17:22:41:95.12%:99:2.1258E-21:35:2:2:0:41 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:25:13:12:26:96.15%:99:5.4444E-14:33:1:1:0:26 1/1:47:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:30:17:13:31:96.77%:99:6.8754E-17:36:1:1:0:31 1/1:45:38:17:21:40:95%:99:8.0088E-21:32:2:1:1:40 1/1:41:54:30:24:56:94.74%:99:2.2097E-29:33:3:2:1:58 1/1:43:44:15:29:46:95.65%:99:2.7459E-24:44:2:1:1:46 MTB_anc 126803 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|ctpI_Rv0107c|gene112|transcript|Transcript_gene112|Coding|1/1|c.3739C>T|p.Pro1247Ser|3739/4899|3739/4899|1247/1632||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.126803G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.126803G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.126803G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:33:17:16:34:97.06%:99:1.3852E-19:0:0:0:0:40 1/1:46:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:39:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:51 1/1:38:39:17:22:40:97.5%:99:3.8137E-22:37:1:0:1:41 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:39:28:13:15:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:36:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:49:31:18:49:100%:99:3.925E-29:0:0:0:0:54 1/1:42:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:38:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:39:35:5:30:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:50 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:41:17:24:41:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 MTB_anc 127366 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|ctpI_Rv0107c|gene112|transcript|Transcript_gene112|Coding|1/1|c.3176C>T|p.Thr1059Ile|3176/4899|3176/4899|1059/1632||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.127366G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.127366G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.127366G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:45:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:45 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:46:27:12:15:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:44:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:54 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:50 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:30:12:18:31:96.77%:99:6.8754E-17:38:1:1:0:32 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:50 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:39 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:44:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:38:26:11:15:27:96.3%:99:2.0165E-15:0:0:0:0:32 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:50 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:29 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:36:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:38:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:37:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:30 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:38:34:11:23:35:97.14%:99:3.2089E-19:37:1:1:0:42 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:41:16:25:42:97.62%:99:2.5612E-23:38:1:0:1:47 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:29 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:29 MTB_anc 129515 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|ctpI_Rv0107c|gene112|transcript|Transcript_gene112|Coding|1/1|c.1027G>T|p.Ala343Ser|1027/4899|1027/4899|343/1632||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.129515C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.129515C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.129515C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:45:63:35:28:63:100%:99:1.657E-37:0:0:0:0:64 1/1:42:27:11:16:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:61 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:46:26:20:47:97.87%:99:2.9526E-26:35:1:1:0:50 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:39 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:33:12:21:34:97.06%:99:1.2301E-18:38:1:1:0:36 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:43:19:24:44:97.73%:99:1.7144E-24:38:1:0:1:50 1/1:41:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:53 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 131174 . T TG . PASS AC=297;AF=0.990;AN=300;ANN=TG|intergenic_region|MODIFIER|Rv0108c_Rv0108c-PE_PGRS1_Rv0109|gene113-gene114|intergenic_region|gene113-gene114|||n.131174_131175insG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:20:11:9:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:18:7:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:47:29:15:14:30:96.67%:99:2.6212E-16:24:1:1:0:30 1/1:50:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:30:16:14:33:90.91%:99:3.0612E-16:46:2:1:1:33 1/1:49:33:14:19:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:63:29:34:62:100%:99:1.657E-37:0:0:0:0:63 0/1:51:17:8:9:19:89.47%:82:5.9414E-9:35:2:1:1:19 1/1:40:51:29:22:50:94.44%:99:1.1771E-27:44:3:2:1:54 1/1:48:35:14:21:35:97.22%:99:8.3613E-20:32:1:0:1:36 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:13:10:25:92%:99:2.7767E-12:46:2:1:1:25 1/1:41:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:18:12:6:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:60:35:25:62:95.24%:99:7.5825E-33:52:3:2:1:63 1/1:45:24:15:9:25:96%:99:2.0568E-13:34:1:1:0:25 1/1:49:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:30:19:11:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:21:15:6:23:91.3%:99:3.6437E-11:60:2:0:2:23 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:36:22:14:38:94.74%:99:1.1316E-19:46:2:2:0:38 1/1:45:29:14:15:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:11:12:23:95.83%:99:7.7525E-13:33:1:1:0:24 1/1:43:28:18:10:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:18:10:8:19:94.74%:92:5.6585E-10:32:1:1:0:19 1/1:42:35:18:17:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:21:15:40:90%:99:1.2627E-18:33:4:2:2:40 1/1:42:30:17:13:32:90.91%:99:9.89E-16:43:3:2:1:33 1/1:46:37:14:23:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:67:33:34:67:98.53%:99:1.1598E-38:34:1:1:0:68 1/1:46:37:21:16:38:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:46:46:20:26:47:97.87%:99:2.9526E-26:34:1:0:1:47 1/1:41:36:23:13:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:42:17:25:43:95.45%:99:3.9431E-23:37:2:2:0:44 1/1:46:24:12:12:26:92.31%:99:7.6222E-13:60:2:2:0:26 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:28:19:9:28:96.55%:99:9.9776E-16:32:1:1:0:30 1/1:42:30:19:11:31:96.77%:99:6.8754E-17:33:1:0:1:32 1/1:42:23:12:11:24:95.83%:99:7.7525E-13:35:1:1:0:24 1/1:43:51:23:28:53:96.23%:99:2.3675E-28:33:2:1:1:53 1/1:40:33:18:15:32:94.29%:99:5.9366E-18:36:2:2:0:35 0/1:46:25:14:11:27:89.29%:99:5.8768E-13:49:3:1:2:28 1/1:49:28:14:14:28:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:43:29:13:16:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:14:8:23:95.65%:99:2.9149E-12:33:1:1:0:23 1/1:43:37:21:16:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:10:14:25:92.31%:99:7.6222E-13:42:2:2:0:26 1/1:41:46:29:17:47:97.87%:99:2.9526E-26:33:1:0:1:47 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:39:18:21:41:95.12%:99:2.1258E-21:47:2:2:0:41 1/1:51:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:14:23:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:24:13:37:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:46:38:17:21:41:92.68%:99:3.1178E-20:43:3:2:1:41 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:47:31:16:46:97.92%:99:7.6145E-27:34:1:0:1:48 1/1:44:55:27:28:54:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:29:13:16:31:93.55%:99:1.1344E-15:46:2:1:1:31 1/1:45:29:16:13:31:93.55%:99:1.1344E-15:34:2:1:1:31 1/1:50:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:27:13:14:27:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:44:37:22:15:39:94.87%:99:3.0128E-20:47:2:1:1:39 1/1:55:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:24:13:11:23:96%:99:2.0568E-13:37:1:1:0:25 1/1:49:25:15:10:27:92.59%:99:2.0853E-13:46:2:2:0:27 1/1:44:31:16:15:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:17:11:6:18:94.44%:86:2.0936E-9:32:1:1:0:18 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:24:13:11:25:96%:99:2.0568E-13:60:1:1:0:25 0/1:42:22:12:10:25:84.62%:99:5.5261E-11:33:4:3:1:26 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:16:12:30:93.33%:99:4.194E-15:36:2:2:0:31 1/1:43:50:22:28:48:98.04%:99:1.3013E-28:37:1:1:0:51 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:16:14:29:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:45:42:24:18:43:97.67%:99:6.6289E-24:34:1:0:1:44 1/1:42:31:16:15:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:11:16:28:93.1%:99:1.5465E-14:47:2:2:0:29 1/1:51:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:39:23:16:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:22:6:16:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:38:17:21:38:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:57:27:30:57:98.28%:99:9.6072E-33:36:1:1:0:58 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:31:15:16:28:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:39:24:15:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:23:12:11:25:92%:99:2.7767E-12:33:2:2:0:25 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:45:23:22:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:37:19:18:38:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:43:17:7:10:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:16:17:36:91.67%:99:2.0653E-17:34:3:2:1:36 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:44:27:17:43:97.78%:99:4.4304E-25:35:1:1:0:45 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:18:14:35:91.43%:99:7.5196E-17:30:3:1:2:35 1/1:44:53:28:25:54:98.15%:99:2.2126E-30:34:1:1:0:54 1/1:41:38:25:13:37:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:39:40:28:12:42:93.02%:99:2.287E-21:33:3:0:3:43 1/1:41:37:17:20:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:38:18:20:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:32:18:14:33:96.97%:99:4.7095E-18:37:1:0:1:33 1/1:42:59:39:20:58:98.33%:99:6.3137E-34:34:1:0:1:60 1/1:41:54:24:30:53:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:58:36:22:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:47:27:20:49:92.16%:99:8.5347E-25:32:4:2:2:51 1/1:37:39:18:21:39:97.5%:99:3.8137E-22:38:1:1:0:40 1/1:40:46:22:24:46:97.87%:99:2.9526E-26:34:1:0:1:47 1/1:40:46:24:22:47:95.83%:99:1.9036E-25:29:2:1:1:48 1/1:39:35:16:19:36:92.11%:99:1.5466E-18:32:3:2:1:38 1/1:41:43:23:20:43:97.73%:99:1.7144E-24:32:1:1:0:44 1/1:39:49:23:26:48:100%:99:3.925E-29:0:0:0:0:49 1/1:39:43:29:14:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:36:20:16:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:12:18:28:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:16:20:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:53:28:25:54:98.15%:99:2.2126E-30:33:1:0:1:54 1/1:41:43:24:19:43:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:41:44:24:20:45:97.78%:99:4.4304E-25:35:1:1:0:45 1/1:40:38:19:19:38:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:45:32:19:13:34:94.12%:99:2.2142E-17:35:2:1:1:34 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:22:14:36:97.3%:99:2.1762E-20:26:1:1:0:37 1/1:44:26:18:8:27:96.3%:99:1.4382E-14:35:1:0:1:27 1/1:40:39:22:17:43:90.7%:99:2.6872E-20:32:4:3:1:43 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:30:17:13:31:93.75%:99:3.0612E-16:47:2:0:2:32 1/1:43:45:25:20:45:97.83%:99:1.1441E-25:34:1:0:1:46 1/1:43:54:27:27:55:98.18%:99:5.6837E-31:60:1:1:0:56 1/1:44:33:19:14:35:94.29%:99:5.9366E-18:29:2:2:0:36 MTB_anc 139032 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|hddA_Rv0115|gene120|transcript|Transcript_gene120|Coding|1/1|c.520G>A|p.Glu174Lys|520/1161|520/1161|174/386||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.139032G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.139032G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:44 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:47 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:32 0/0:0:0:0:0:20:0%:36:1E0:40:20:6:14:21 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:30 0/0:39:1:0:1:30:3.33%:44:5E-1:45:29:13:16:30 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:47:0%:89:1E0:44:47:17:30:49 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:22 0/0:0:0:0:0:56:0%:99:1E0:44:56:22:34:57 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:36 0/0:39:1:0:1:25:4%:38:5E-1:39:24:11:13:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:43:0%:82:1E0:41:43:25:18:45 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:34 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:19 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:24:0%:44:1E0:40:24:6:18:24 0/0:38:1:1:0:37:2.7%:59:5E-1:42:36:16:20:37 0/0:37:1:0:1:33:3.03%:52:5E-1:42:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:35 0/0:0:0:0:0:52:0%:96:1E0:43:52:29:23:53 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:39 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:46 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:42 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:34 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:33 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:40 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:16 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:31 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:18 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:36 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:43 0/0:0:0:0:0:67:0%:99:1E0:45:67:33:34:70 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:12:0%:21:1E0:47:12:5:7:13 0/0:0:0:0:0:19:0%:37:1E0:41:19:6:13:21 0/0:39:1:0:1:46:2.17%:73:5E-1:44:45:23:22:47 0/0:60:1:0:1:25:4%:38:5E-1:41:24:11:13:25 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:19 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:29 0/0:0:0:0:0:15:0%:29:1E0:46:15:8:7:15 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:25:1:1:0:29:3.45%:45:5E-1:41:28:16:12:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:48 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:18 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:40:0%:74:1E0:39:40:14:26:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:60:1:1:0:58:1.72%:94:5E-1:43:57:24:33:59 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 1/1:39:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:38 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:23 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:39:1:1:0:32:3.12%:48:5E-1:41:31:14:17:33 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:42 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:39 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:13:22:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:55:0%:99:1E0:40:55:30:25:55 0/0:0:0:0:0:59:0%:99:1E0:41:59:25:34:60 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:27 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:54:0%:99:1E0:39:54:28:26:56 0/0:0:0:0:0:34:0%:62:1E0:41:34:11:23:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:43 0/0:0:0:0:0:42:0%:77:1E0:38:42:23:19:45 0/0:0:0:0:0:47:0%:89:1E0:40:47:20:27:48 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:35 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:24 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:45 0/0:0:0:0:0:47:0%:89:1E0:39:47:21:26:50 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:39 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:38 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:29 0/0:38:1:0:1:43:2.33%:70:5E-1:41:42:17:25:46 0/0:0:0:0:0:43:0%:82:1E0:38:43:20:23:44 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:48 0/0:0:0:0:0:41:0%:78:1E0:39:41:16:25:41 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:42 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:45 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:52 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:45 MTB_anc 139756 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|hddA_Rv0115-Rv0115a_Rv0115a|gene120-gene121|intergenic_region|gene120-gene121|||n.139756C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:52:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:61:34:27:61:100%:99:2.609E-36:0:0:0:0:61 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:74:35:39:74:100%:99:4.2804E-44:0:0:0:0:74 1/1:47:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:54:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:53:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:64:28:36:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:52 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:61 1/1:40:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:44:27:17:45:97.78%:99:3.8097E-26:0:0:0:0:47 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:60:26:34:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 MTB_anc 140456 . C A . PASS AC=12;AF=0.040;AN=300;ANN=A|synonymous_variant|LOW|ldtA_Rv0116c|gene122|transcript|Transcript_gene122|Coding|1/1|c.567G>T|p.Gly189Gly|567/756|567/756|189/251||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.140456C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|beta-lactams|||n.140456C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.140456C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:39:1:0:1:52:1.92%:83:5E-1:43:51:21:30:52 0/0:0:0:0:0:21:0%:40:1E0:51:21:12:9:21 0/0:0:0:0:0:48:0%:89:1E0:45:48:20:28:49 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:37:0%:70:1E0:48:37:14:23:37 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:51:0%:97:1E0:46:51:24:27:52 0/0:0:0:0:0:27:0%:52:1E0:50:27:12:15:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:53:0%:99:1E0:46:53:24:29:54 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:54:0%:99:1E0:46:54:21:33:54 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:21 1/1:43:25:16:9:26:96.15%:99:5.4444E-14:60:1:0:1:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:55:0%:99:1E0:44:55:21:34:55 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:32:0%:59:1E0:50:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 1/1:48:26:15:11:27:96.3%:99:1.4382E-14:38:1:0:1:27 0/0:0:0:0:0:26:0%:47:1E0:50:26:12:14:26 0/0:0:0:0:0:18:0%:32:1E0:45:18:4:14:18 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:47:0%:89:1E0:48:47:24:23:49 0/0:0:0:0:0:47:0%:89:1E0:49:47:19:28:47 0/0:0:0:0:0:40:0%:74:1E0:49:40:18:22:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:45:0%:85:1E0:46:45:20:25:46 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:21:0%:40:1E0:44:21:5:16:22 0/0:0:0:0:0:30:0%:55:1E0:47:30:11:19:31 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:34:0%:62:1E0:48:34:11:23:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:20:0%:36:1E0:41:20:3:17:21 0/0:0:0:0:0:45:0%:81:1E0:48:44:21:23:46 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:23 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:14:0%:25:1E0:49:14:7:7:14 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:44 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:38:0%:70:1E0:50:38:20:18:38 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:34 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:59:0%:99:1E0:45:59:24:35:59 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:16:0%:29:1E0:53:16:10:6:17 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:26 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:50:31:18:13:31 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:0:0:0:0:44:0%:81:1E0:54:44:23:21:45 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:35 0/0:0:0:0:0:20:0%:36:1E0:50:20:6:14:20 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:36 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:28:0%:51:1E0:43:28:8:20:28 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:35 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 1/1:48:36:14:22:37:97.3%:99:2.1762E-20:60:1:1:0:37 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:56:0%:99:1E0:42:56:27:29:57 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:51 0/0:0:0:0:0:29:0%:55:1E0:44:29:9:20:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:49 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:30 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:39 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:48:35:12:23:37 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:44 0/0:0:0:0:0:52:0%:96:1E0:45:52:19:33:52 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:45 0/0:0:0:0:0:37:0%:70:1E0:50:37:20:17:37 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:14:29:44 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:60:0%:99:1E0:42:60:36:24:60 0/0:0:0:0:0:51:0%:97:1E0:44:51:27:24:52 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:32 0/0:0:0:0:0:56:0%:99:1E0:42:56:25:31:57 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:41 0/0:0:0:0:0:54:0%:99:1E0:43:54:25:29:56 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:38 0/0:0:0:0:0:56:0%:99:1E0:40:56:26:30:57 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 0/0:0:0:0:0:48:0%:89:1E0:41:48:22:26:49 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:44 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:29 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:44 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:33 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:58:0%:99:1E0:38:58:25:33:60 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:46 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:45:0%:85:1E0:47:45:23:22:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:51:0%:97:1E0:44:51:22:29:51 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:37 MTB_anc 141794 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|oxyS_Rv0117|gene123|transcript|Transcript_gene123|Coding|1/1|c.595A>G|p.Met199Val|595/945|595/945|199/314||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.141794A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.141794A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:39 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/1:37:16:8:8:44:36.36%:55:2.8784E-6:39:28:14:14:44 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:28 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:20 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:21 0/0:0:0:0:0:25:0%:48:1E0:37:25:17:8:25 0/0:0:0:0:0:20:0%:36:1E0:39:20:5:15:20 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:33:0%:63:1E0:36:33:11:22:33 0/0:0:0:0:0:17:0%:33:1E0:40:17:6:11:17 0/0:0:0:0:0:40:0%:74:1E0:37:40:18:22:41 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:31 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:16 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:19 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:17 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:45:0%:85:1E0:39:45:15:30:45 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:27 0/0:0:0:0:0:34:0%:62:1E0:37:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:6:17:24 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:25 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:17 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:6:13:19 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:66:0%:99:1E0:38:66:25:41:67 0/0:0:0:0:0:42:0%:77:1E0:39:42:16:26:42 0/0:0:0:0:0:51:0%:97:1E0:37:51:21:30:52 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:22 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:33 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:16 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:24 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:15 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:25 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:13 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:22 0/0:0:0:0:0:22:0%:40:1E0:36:22:12:10:22 0/0:0:0:0:0:37:0%:70:1E0:38:37:15:22:37 0/0:0:0:0:0:14:0%:25:1E0:43:14:9:5:14 0/0:0:0:0:0:26:0%:47:1E0:35:26:7:19:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:36:28:13:15:29 0/0:0:0:0:0:20:0%:36:1E0:35:20:11:9:20 0/0:0:0:0:0:39:0%:74:1E0:37:39:17:22:39 0/0:0:0:0:0:37:0%:70:1E0:37:37:18:19:37 0/0:0:0:0:0:25:0%:48:1E0:40:25:7:18:25 0/0:0:0:0:0:28:0%:51:1E0:36:28:12:16:29 0/0:0:0:0:0:39:0%:74:1E0:38:39:19:20:40 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:10:22:32 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:36 0/0:0:0:0:0:20:0%:36:1E0:37:20:5:15:20 0/0:0:0:0:0:29:0%:55:1E0:37:29:10:19:31 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:44 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:19 0/0:0:0:0:0:23:0%:44:1E0:38:23:5:18:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:19 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:13:0%:25:1E0:41:13:8:5:13 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:27 0/0:0:0:0:0:19:0%:37:1E0:38:19:5:14:19 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:6:18:24 0/0:0:0:0:0:18:0%:32:1E0:36:18:6:12:18 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:25 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:25 0/0:0:0:0:0:26:0%:47:1E0:38:26:7:19:27 0/0:0:0:0:0:23:0%:44:1E0:39:23:7:16:24 0/0:0:0:0:0:12:0%:21:1E0:39:12:3:9:12 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:33 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:21 0/0:0:0:0:0:35:0%:67:1E0:37:35:14:21:36 0/0:0:0:0:0:29:0%:55:1E0:37:29:12:17:30 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:27:0%:52:1E0:36:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:36:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:29:0%:55:1E0:37:29:12:17:29 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:35 0/0:0:0:0:0:34:0%:62:1E0:36:34:10:24:35 0/0:0:0:0:0:26:0%:47:1E0:39:26:5:21:26 0/0:0:0:0:0:15:0%:29:1E0:35:15:5:10:15 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:26 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:35:27:8:19:27 0/0:0:0:0:0:34:0%:62:1E0:38:34:20:14:34 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:32 0/0:0:0:0:0:23:0%:44:1E0:36:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:37:32:14:18:32 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:21 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:31 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:31 0/0:0:0:0:0:39:0%:74:1E0:36:39:14:25:39 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:26 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:18 0/0:0:0:0:0:38:0%:70:1E0:39:38:13:25:38 0/0:0:0:0:0:31:0%:59:1E0:35:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:35:26:10:16:26 0/0:0:0:0:0:49:0%:93:1E0:35:49:16:33:52 0/0:0:0:0:0:26:0%:47:1E0:38:26:6:20:26 0/0:0:0:0:0:46:0%:85:1E0:36:46:21:25:46 0/0:0:0:0:0:41:0%:78:1E0:35:41:10:31:45 0/0:0:0:0:0:34:0%:62:1E0:36:34:13:21:35 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:25 0/0:0:0:0:0:38:0%:70:1E0:35:38:11:27:38 0/0:0:0:0:0:30:0%:55:1E0:35:30:12:18:30 0/0:0:0:0:0:43:0%:82:1E0:37:43:17:26:47 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:27 0/0:0:0:0:0:36:0%:66:1E0:35:36:16:20:36 0/0:0:0:0:0:37:0%:70:1E0:36:37:13:24:38 0/0:0:0:0:0:31:0%:59:1E0:36:31:11:20:32 0/0:0:0:0:0:40:0%:74:1E0:36:40:13:27:40 0/0:0:0:0:0:29:0%:55:1E0:38:29:10:19:29 0/0:0:0:0:0:35:0%:67:1E0:37:35:10:25:35 0/0:0:0:0:0:35:0%:67:1E0:37:35:16:19:36 0/0:0:0:0:0:13:0%:25:1E0:37:13:9:4:13 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:28 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:19 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:22 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:35 0/0:0:0:0:0:34:0%:62:1E0:36:34:14:20:34 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:29 MTB_anc 143207 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|oxcA_Rv0118c|gene124|transcript|Transcript_gene124|Coding|1/1|c.670G>A|p.Gly224Ser|670/1749|670/1749|224/582||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.143207C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.143207C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:37:15:22:38:97.37%:99:5.6582E-21:37:1:0:1:38 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:51:35:16:52:98.08%:99:2.5024E-30:0:0:0:0:53 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:65:34:31:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:52:35:17:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:47:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:51:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 MTB_anc 147843 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|fusA2_Rv0120c-Rv0121c_Rv0121c|gene126-gene127|intergenic_region|gene126-gene127|||n.147843C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:50:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:52:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:19:18:38:97.37%:99:5.6582E-21:39:1:1:0:38 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:25:11:14:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:51:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:21:11:10:22:100%:99:1.8578E-12:0:0:0:0:24 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:18:9:9:19:94.74%:92:5.6585E-10:39:1:1:0:19 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:42:33:17:16:34:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 150684 . T C . PASS AC=2;AF=7.246e-03;AN=276;ANN=C|synonymous_variant|LOW|PE_PGRS2_Rv0124|gene130|transcript|Transcript_gene130|Coding|1/1|c.1152T>C|p.Asn384Asn|1152/1464|1152/1464|384/487||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.150684T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.150684T>C||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:18:0%:32:1E0:38:18:4:14:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:25 0/0:0:0:0:0:8:0%:14:1E0:35:8:1:7:8 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:22 0/0:0:0:0:0:11:0%:22:1E0:38:11:4:7:12 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:12 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:16 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:12 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:20 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:14 0/0:0:0:0:0:21:0%:40:1E0:37:21:5:16:22 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:9 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:19 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:11 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:13 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:41:9:0:9:10 0/0:0:0:0:0:8:0%:14:1E0:40:8:4:4:9 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:23 0/0:0:0:0:0:14:0%:25:1E0:39:14:2:12:14 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:17 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:17 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:10 0/0:0:0:0:0:16:0%:29:1E0:38:16:4:12:17 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:15 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:23 0/0:0:0:0:0:14:0%:25:1E0:37:14:4:10:15 0/0:0:0:0:0:10:0%:17:1E0:39:10:4:6:11 0/0:0:0:0:0:17:0%:33:1E0:35:17:6:11:19 0/0:24:1:0:1:23:4.35%:34:5E-1:38:22:9:13:24 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:18 0/0:0:0:0:0:20:0%:36:1E0:36:20:7:13:21 0/0:0:0:0:0:29:0%:55:1E0:38:29:10:19:33 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:18 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:31 0/0:0:0:0:0:9:0%:18:1E0:44:9:5:4:10 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:18 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:12 0/0:0:0:0:0:8:0%:14:1E0:39:8:2:6:9 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:15 0/0:0:0:0:0:24:0%:44:1E0:39:24:7:17:25 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:11 0/0:0:0:0:0:16:0%:29:1E0:35:16:4:12:16 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:21 0/0:0:0:0:0:18:0%:32:1E0:38:18:4:14:20 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:10 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:20 0/0:0:0:0:0:14:0%:25:1E0:39:14:5:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:35:11:0:11:11 0/0:0:0:0:0:23:0%:44:1E0:38:23:7:16:26 0/0:0:0:0:0:13:0%:25:1E0:38:13:7:6:14 0/0:0:0:0:0:7:0%:14:1E0:40:7:3:4:7 0/0:0:0:0:0:18:0%:32:1E0:37:18:4:14:18 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:12 0/0:0:0:0:0:18:0%:32:1E0:36:18:6:12:20 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:14 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:13 0/0:0:0:0:0:16:0%:29:1E0:38:16:4:12:16 0/0:0:0:0:0:26:0%:47:1E0:37:26:7:19:26 0/0:0:0:0:0:7:0%:14:1E0:37:7:3:4:7 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:17 0/0:0:0:0:0:8:0%:14:1E0:43:8:2:6:9 0/0:0:0:0:0:12:0%:21:1E0:39:12:2:10:13 0/0:0:0:0:0:17:0%:33:1E0:40:17:6:11:18 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:18 0/0:0:0:0:0:10:0%:17:1E0:41:10:2:8:10 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:13 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:30 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:37:7:1:6:8 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:19 0/0:0:0:0:0:15:0%:29:1E0:39:15:3:12:15 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:16 0/0:0:0:0:0:17:0%:33:1E0:36:17:3:14:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:21 0/0:0:0:0:0:12:0%:21:1E0:41:12:5:7:12 0/0:0:0:0:0:16:0%:29:1E0:38:16:3:13:17 0/0:0:0:0:0:16:0%:29:1E0:39:16:8:8:16 0/0:0:0:0:0:23:0%:44:1E0:36:23:5:18:23 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:16 0/0:0:0:0:0:31:0%:59:1E0:36:31:9:22:32 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:15 0/0:0:0:0:0:11:0%:22:1E0:40:11:2:9:15 0/0:0:0:0:0:22:0%:40:1E0:36:22:5:17:23 0/0:0:0:0:0:12:0%:21:1E0:35:12:0:12:12 0/0:0:0:0:0:22:0%:40:1E0:39:22:5:17:22 0/0:0:0:0:0:14:0%:25:1E0:40:14:8:6:15 0/0:0:0:0:0:31:0%:59:1E0:36:31:8:23:33 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:14 0/0:0:0:0:0:27:0%:52:1E0:36:27:9:18:30 0/0:0:0:0:0:12:0%:21:1E0:35:12:3:9:12 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:21 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:18 0/0:0:0:0:0:22:0%:40:1E0:38:22:4:18:22 0/0:0:0:0:0:20:0%:36:1E0:40:20:6:14:20 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:31 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:19 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:27 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:20 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:22 0/0:0:0:0:0:18:0%:32:1E0:36:18:7:11:19 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:22 0/0:0:0:0:0:13:0%:25:1E0:38:13:1:12:15 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 0/0:0:0:0:0:24:0%:44:1E0:38:24:8:16:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:24 0/0:0:0:0:0:12:0%:21:1E0:39:12:6:6:12 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:21 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:12 0/0:0:0:0:0:11:0%:22:1E0:39:11:5:6:13 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:1:11:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 0/0:0:0:0:0:14:0%:25:1E0:35:14:5:9:14 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:13 0/0:0:0:0:0:9:0%:18:1E0:34:9:3:6:10 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:12 0/0:0:0:0:0:16:0%:29:1E0:37:16:2:14:17 0/0:0:0:0:0:16:0%:29:1E0:41:16:3:13:17 0/0:0:0:0:0:13:0%:25:1E0:34:13:4:9:14 0/0:0:0:0:0:20:0%:36:1E0:36:20:7:13:20 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 0/0:0:0:0:0:9:0%:18:1E0:38:9:3:6:9 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:11 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:4:16:22 0/0:0:0:0:0:7:0%:14:1E0:41:7:3:4:7 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:11 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:29 0/0:0:0:0:0:18:0%:32:1E0:36:18:7:11:18 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:10 MTB_anc 150691 . T G . PASS AC=2;AF=7.813e-03;AN=256;ANN=G|missense_variant|MODERATE|PE_PGRS2_Rv0124|gene130|transcript|Transcript_gene130|Coding|1/1|c.1159T>G|p.Ser387Ala|1159/1464|1159/1464|387/487||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.150691T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.150691T>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:16:0%:29:1E0:33:16:3:13:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:19:0%:37:1E0:36:19:4:15:20 0/0:0:0:0:0:7:0%:14:1E0:36:7:0:7:7 0/0:0:0:0:0:18:0%:32:1E0:36:18:1:17:18 0/0:0:0:0:0:8:0%:14:1E0:35:8:0:8:9 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:0:0:0:0:17:0%:33:1E0:34:17:3:14:17 0/0:0:0:0:0:9:0%:18:1E0:34:9:1:8:11 0/0:0:0:0:0:18:0%:32:1E0:35:18:6:12:18 0/0:0:0:0:0:11:0%:22:1E0:36:11:0:11:12 0/0:0:0:0:0:17:0%:33:1E0:36:17:0:17:20 0/0:0:0:0:0:7:0%:14:1E0:36:7:1:6:7 0/0:30:1:1:0:14:7.14%:17:5E-1:33:13:2:11:15 0/0:0:0:0:0:10:0%:17:1E0:35:10:1:9:10 0/0:0:0:0:0:11:0%:22:1E0:36:11:2:9:13 0/0:0:0:0:0:7:0%:14:1E0:35:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:35:9:0:9:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:17 0/0:0:0:0:0:12:0%:21:1E0:36:12:0:12:12 0/0:37:1:1:0:14:7.14%:17:5E-1:35:13:4:9:14 0/0:0:0:0:0:14:0%:25:1E0:35:14:3:11:18 0/0:0:0:0:0:17:0%:33:1E0:34:17:3:14:17 0/0:0:0:0:0:8:0%:14:1E0:33:8:2:6:9 0/0:0:0:0:0:14:0%:25:1E0:36:14:3:11:15 0/0:0:0:0:0:10:0%:17:1E0:35:10:1:9:12 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:17 0/0:0:0:0:0:14:0%:25:1E0:39:14:4:10:17 0/0:0:0:0:0:11:0%:22:1E0:36:11:0:11:12 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:13:0%:25:1E0:37:13:1:12:13 0/0:0:0:0:0:16:0%:29:1E0:35:16:2:14:18 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:16 0/0:0:0:0:0:11:0%:22:1E0:37:11:0:11:16 0/0:0:0:0:0:26:0%:47:1E0:34:26:6:20:28 0/0:0:0:0:0:15:0%:29:1E0:35:15:4:11:18 0/0:0:0:0:0:20:0%:36:1E0:35:20:4:16:21 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:9 0/0:0:0:0:0:12:0%:21:1E0:36:12:0:12:14 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:11 0/0:0:0:0:0:8:0%:14:1E0:35:8:1:7:8 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:13 0/0:0:0:0:0:22:0%:40:1E0:35:22:4:18:22 0/0:0:0:0:0:9:0%:18:1E0:34:9:1:8:9 0/0:0:0:0:0:11:0%:22:1E0:33:11:1:10:11 0/0:0:0:0:0:15:0%:29:1E0:36:15:1:14:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:5:14:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:14 0/0:0:0:0:0:12:0%:21:1E0:37:12:2:10:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:10:0%:17:1E0:35:10:0:10:10 0/0:0:0:0:0:21:0%:40:1E0:34:21:2:19:22 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:16 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:13 0/0:0:0:0:0:18:0%:32:1E0:35:18:3:15:19 0/0:0:0:0:0:14:0%:25:1E0:37:14:1:13:15 0/0:0:0:0:0:11:0%:22:1E0:34:11:0:11:15 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:13 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:16 0/0:0:0:0:0:19:0%:37:1E0:36:19:2:17:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:30:1:1:0:17:5.88%:24:5E-1:36:16:4:12:17 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:0:0:0:0:11:0%:22:1E0:36:11:0:11:13 0/0:0:0:0:0:13:0%:25:1E0:38:13:2:11:13 0/0:0:0:0:0:14:0%:25:1E0:35:14:1:13:14 0/0:0:0:0:0:8:0%:14:1E0:34:8:0:8:8 0/0:0:0:0:0:12:0%:21:1E0:37:12:2:10:12 0/0:0:0:0:0:25:0%:48:1E0:35:25:7:18:28 0/0:0:0:0:0:8:0%:14:1E0:34:8:2:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:0:0:0:0:13:0%:25:1E0:36:13:3:10:15 0/0:0:0:0:0:16:0%:29:1E0:34:16:1:15:17 0/0:0:0:0:0:11:0%:22:1E0:34:11:4:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:11 0/0:0:0:0:0:15:0%:29:1E0:37:15:1:14:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:15:0%:29:1E0:36:15:1:14:16 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:11 0/0:0:0:0:0:17:0%:33:1E0:36:17:2:15:17 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:11 0/0:0:0:0:0:17:0%:33:1E0:35:17:1:16:18 0/0:0:0:0:0:13:0%:25:1E0:37:13:4:9:13 0/0:0:0:0:0:23:0%:44:1E0:36:23:1:22:23 0/0:0:0:0:0:11:0%:22:1E0:36:11:0:11:12 0/0:0:0:0:0:13:0%:25:1E0:36:13:1:12:14 0/0:0:0:0:0:19:0%:37:1E0:35:19:2:17:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:1:12:14 0/0:0:0:0:0:23:0%:44:1E0:35:23:6:17:23 0/0:0:0:0:0:10:0%:17:1E0:34:10:3:7:13 0/0:0:0:0:0:26:0%:47:1E0:36:26:3:23:31 0/0:0:0:0:0:10:0%:17:1E0:33:10:1:9:11 0/0:0:0:0:0:23:0%:44:1E0:33:23:5:18:26 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:10 0/0:0:0:0:0:16:0%:29:1E0:34:16:5:11:18 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:16 0/0:0:0:0:0:21:0%:40:1E0:36:21:3:18:22 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:20 0/0:0:0:0:0:18:0%:32:1E0:36:18:0:18:20 0/0:0:0:0:0:21:0%:40:1E0:34:21:7:14:21 0/0:0:0:0:0:21:0%:40:1E0:35:21:5:16:22 0/0:0:0:0:0:13:0%:25:1E0:35:13:1:12:14 0/0:0:0:0:0:18:0%:32:1E0:35:18:3:15:19 0/0:0:0:0:0:13:0%:25:1E0:35:13:1:12:15 0/0:0:0:0:0:20:0%:36:1E0:34:20:3:17:23 0/0:0:0:0:0:12:0%:21:1E0:36:12:0:12:13 0/0:0:0:0:0:15:0%:29:1E0:36:15:1:14:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 0/0:0:0:0:0:18:0%:32:1E0:36:18:2:16:18 0/0:0:0:0:0:16:0%:29:1E0:35:16:4:12:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:18:0%:32:1E0:35:18:3:15:18 0/0:0:0:0:0:12:0%:21:1E0:34:12:2:10:12 0/0:0:0:0:0:10:0%:17:1E0:34:10:2:8:10 0/0:0:0:0:0:9:0%:18:1E0:35:9:1:8:9 0/0:0:0:0:0:10:0%:17:1E0:35:10:0:10:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:33:11:1:10:11 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:37:15:2:13:15 0/0:0:0:0:0:15:0%:29:1E0:36:15:1:14:15 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:13 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:16 0/0:0:0:0:0:13:0%:25:1E0:37:13:4:9:13 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:10 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:9 0/0:0:0:0:0:17:0%:33:1E0:35:17:4:13:17 0/0:0:0:0:0:18:0%:32:1E0:35:18:1:17:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:9 0/0:0:0:0:0:18:0%:32:1E0:34:18:2:16:20 0/0:0:0:0:0:10:0%:17:1E0:35:10:0:10:12 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:13 MTB_anc 150890 . G A . PASS AC=44;AF=0.216;AN=204;ANN=A|missense_variant|MODERATE|PE_PGRS2_Rv0124|gene130|transcript|Transcript_gene130|Coding|1/1|c.1358G>A|p.Gly453Asp|1358/1464|1358/1464|453/487||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.150890G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.150890G>A||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:9:3:6:18:50%:32:5.1645E-4:36:9:1:8:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:6:2:4:11:54.55%:22:6.192E-3:37:5:2:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:10:0:10:16:62.5%:39:1.2413E-4:36:6:2:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:34:5:2:3:17:29.41%:8:2.2239E-2:37:12:3:9:17 0/1:36:8:2:6:10:80%:34:3.5723E-4:48:2:1:1:10 0/0:34:4:2:2:12:33.33%:4:4.6584E-2:39:8:2:6:12 0/1:37:8:1:7:15:53.33%:29:1.0995E-3:43:7:2:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:6:2:4:14:42.86%:20:7.971E-3:38:8:3:5:14 0/0:38:5:1:4:13:38.46%:4:1.9565E-2:38:8:2:6:13 0/0:38:3:2:1:11:27.27%:7:1.0714E-1:38:8:2:6:11 0/0:38:3:0:3:9:33.33%:4:1.0294E-1:38:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:31:4:4:0:11:36.36%:4:4.5113E-2:34:7:1:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:7:2:5:12:58.33%:26:2.2883E-3:38:5:2:3:12 0/0:35:1:0:1:8:12.5%:8:5E-1:38:7:1:6:8 0/0:35:4:2:2:15:26.67%:8:4.9808E-2:39:11:6:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:41:5:2:3:11:45.45%:3:1.7544E-2:33:6:3:3:12 0/0:36:3:0:3:11:27.27%:7:1.0714E-1:39:8:4:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:31:3:2:1:9:33.33%:4:1.0294E-1:39:6:1:5:9 0/1:37:9:1:8:13:69.23%:36:2.2883E-4:36:4:1:3:13 0/0:36:5:0:5:14:35.71%:4:2.037E-2:39:9:6:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:12:1:11:24:50%:44:3.8815E-5:38:12:4:8:24 0/0:37:5:2:3:14:35.71%:4:2.037E-2:39:9:2:7:14 0/1:36:8:3:5:21:38.1%:27:1.7241E-3:37:13:5:8:21 0/1:35:6:3:3:11:54.55%:22:6.192E-3:35:5:3:2:11 0/0:38:3:1:2:13:23.08%:9:1.1E-1:37:10:6:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:4:0:4:12:33.33%:4:4.6584E-2:36:8:4:4:12 0/0:36:4:2:2:11:36.36%:4:4.5113E-2:33:7:3:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:5:2:3:11:45.45%:3:1.7544E-2:34:6:2:4:11 0/1:36:8:3:5:17:47.06%:28:1.3389E-3:35:9:6:3:18 0/1:36:8:3:5:15:53.33%:29:1.0995E-3:36:7:3:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:6:2:4:10:60%:22:5.418E-3:35:4:0:4:11 0/1:37:6:3:3:11:54.55%:22:6.192E-3:40:5:2:3:11 0/0:33:5:4:1:11:45.45%:3:1.7544E-2:35:6:2:4:12 0/1:33:6:3:3:17:35.29%:20:9.2021E-3:36:11:0:11:17 0/0:38:4:1:3:10:40%:3:4.3344E-2:35:6:4:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:7:3:4:13:53.85%:25:2.6087E-3:44:6:4:2:13 0/0:34:2:1:1:8:25%:5:2.3333E-1:36:6:1:5:8 0/0:38:4:0:4:11:36.36%:4:4.5113E-2:38:7:3:4:11 0/1:35:6:1:5:12:50%:21:6.865E-3:35:6:1:5:12 0/1:36:6:1:5:11:54.55%:22:6.192E-3:35:5:3:2:11 0/0:36:4:2:2:11:36.36%:4:4.5113E-2:36:7:2:5:11 0/1:38:9:2:7:17:52.94%:33:4.6348E-4:35:8:2:6:18 0/1:36:11:2:9:26:42.31%:38:1.2791E-4:40:15:5:10:26 0/0:38:1:1:0:11:9.09%:14:5E-1:36:10:2:8:11 0/1:36:7:3:4:18:38.89%:24:3.8123E-3:37:11:2:9:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:3:1:2:13:23.08%:9:1.1E-1:41:10:4:6:13 0/0:34:5:3:2:14:35.71%:4:2.037E-2:34:9:3:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:4:2:2:12:33.33%:4:4.6584E-2:35:8:2:6:13 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:38:10:4:6:14 0/0:37:5:3:2:13:38.46%:4:1.9565E-2:40:8:2:6:13 0/1:36:6:2:4:13:46.15%:21:7.4534E-3:39:7:5:2:13 0/0:38:5:1:4:15:33.33%:6:2.1073E-2:40:10:4:6:16 0/0:36:4:2:2:10:40%:3:4.3344E-2:34:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:36:3:0:3:11:27.27%:7:1.0714E-1:39:8:1:7:13 0/0:38:3:0:3:19:15.79%:17:1.1486E-1:40:16:3:13:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:34:4:0:4:12:33.33%:4:4.6584E-2:37:8:3:5:13 0/0:34:3:0:3:9:33.33%:4:1.0294E-1:35:6:2:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:36:3:1:2:10:30%:4:1.0526E-1:39:7:3:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:36:4:0:4:10:40%:3:4.3344E-2:39:6:3:3:10 0/0:34:5:3:2:14:35.71%:4:2.037E-2:36:9:2:7:14 0/0:38:2:1:1:8:25%:5:2.3333E-1:34:6:2:4:9 0/1:37:7:1:6:13:53.85%:25:2.6087E-3:36:6:4:2:14 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:36:10:3:7:12 0/0:38:1:0:1:9:11.11%:11:5E-1:36:8:3:5:9 0/1:33:6:3:3:15:40%:20:8.4291E-3:34:9:3:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:34:4:2:2:12:33.33%:4:4.6584E-2:36:8:1:7:12 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:38:10:5:5:15 0/1:37:6:2:4:13:46.15%:21:7.4534E-3:43:7:2:5:13 0/1:36:9:4:5:15:60%:34:3.4983E-4:35:6:3:3:15 0/0:34:5:1:4:11:45.45%:3:1.7544E-2:38:6:1:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:38:3:1:2:20:15%:16:1.1538E-1:40:17:5:12:20 0/1:37:6:4:2:13:46.15%:21:7.4534E-3:35:7:0:7:13 0/0:37:5:3:2:23:21.74%:14:2.4548E-2:39:18:2:16:23 0/0:36:5:0:5:12:41.67%:3:1.8634E-2:43:7:5:2:13 0/1:36:10:1:9:19:52.63%:37:1.9541E-4:38:9:3:6:20 0/1:36:9:2:7:15:60%:34:3.4983E-4:35:6:3:3:15 0/1:37:7:1:6:10:70%:28:1.548E-3:44:3:2:1:10 0/0:38:2:1:1:9:22.22%:7:2.3529E-1:34:7:2:5:10 0/1:41:7:3:4:15:46.67%:25:3.1609E-3:41:8:4:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:37:7:1:6:11:63.64%:27:1.935E-3:42:4:4:0:11 0/0:34:5:3:2:11:45.45%:3:1.7544E-2:35:6:0:6:11 0/1:37:10:2:8:19:52.63%:37:1.9541E-4:35:9:3:6:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:6:3:3:16:37.5%:20:8.837E-3:36:10:4:6:16 0/0:38:5:0:5:20:25%:10:2.3562E-2:37:15:9:6:20 0/1:35:6:1:5:9:66.67%:23:4.5249E-3:44:3:1:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:1:7:13:61.54%:30:8.238E-4:34:5:0:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:6:3:3:15:40%:20:8.4291E-3:36:9:2:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:6:2:4:12:50%:21:6.865E-3:34:6:3:3:13 0/0:31:4:2:2:12:33.33%:4:4.6584E-2:34:8:0:8:12 0/0:38:3:0:3:9:33.33%:4:1.0294E-1:43:6:2:4:9 0/1:36:7:2:5:12:58.33%:26:2.2883E-3:39:5:4:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:8:3:5:11:72.73%:32:5.16E-4:32:3:1:2:11 0/1:37:7:0:7:10:70%:28:1.548E-3:35:3:0:3:10 0/0:37:4:0:4:10:40%:3:4.3344E-2:40:6:3:3:10 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:34:10:5:5:15 0/0:37:4:2:2:14:28.57%:6:4.8889E-2:38:10:3:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:3:0:3:11:27.27%:7:1.0714E-1:36:8:7:1:12 0/0:38:5:0:5:11:45.45%:3:1.7544E-2:37:6:2:4:12 0/0:36:4:2:2:10:40%:3:4.3344E-2:39:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:8:1:7:23:34.78%:27:1.8791E-3:39:15:4:11:23 0/0:38:2:0:2:11:18.18%:10:2.381E-1:38:9:2:7:11 0/1:36:6:1:5:9:66.67%:23:4.5249E-3:37:3:1:2:11 MTB_anc 153227 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|treS_Rv0126|gene132|transcript|Transcript_gene132|Coding|1/1|c.904T>C|p.Cys302Arg|904/1806|904/1806|302/601||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.153227T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.153227T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:46:38:23:15:38 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:47:0%:89:1E0:46:47:25:22:48 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:35 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:39:0%:74:1E0:49:39:20:19:39 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:52:0%:96:1E0:45:52:24:28:52 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:6:21:27 0/0:0:0:0:0:29:0%:55:1E0:49:29:4:25:29 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:29 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:35 0/0:0:0:0:0:51:0%:97:1E0:43:51:28:23:51 0/0:0:0:0:0:33:0%:63:1E0:49:33:18:15:33 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:12:0%:21:1E0:47:12:3:9:12 0/0:0:0:0:0:19:0%:37:1E0:50:19:7:12:20 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:24 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:6:18:24 0/0:0:0:0:0:34:0%:62:1E0:51:34:19:15:34 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:15 0/0:0:0:0:0:32:0%:59:1E0:52:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:44:0%:81:1E0:49:44:22:22:44 0/0:0:0:0:0:83:0%:99:1E0:49:83:43:40:84 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:49 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:42 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 0/0:0:0:0:0:50:0%:92:1E0:49:50:21:29:51 0/0:0:0:0:0:16:0%:29:1E0:51:16:9:7:16 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:38:1:1:0:39:2.56%:62:5E-1:44:38:24:14:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:36 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:47 0/0:0:0:0:0:30:0%:55:1E0:47:30:21:9:31 0/0:0:0:0:0:48:0%:89:1E0:45:48:20:28:48 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:35 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:50:0%:92:1E0:46:50:23:27:51 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:19:0%:37:1E0:52:19:8:11:20 0/0:0:0:0:0:24:0%:44:1E0:49:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:35:0%:67:1E0:48:35:14:21:35 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:16 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:25:0%:48:1E0:49:25:16:9:26 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:31 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:24 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:21:0%:40:1E0:44:21:6:15:22 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:37 0/0:0:0:0:0:22:0%:40:1E0:53:22:13:9:22 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:40 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:37 0/0:0:0:0:0:68:0%:99:1E0:46:68:32:36:68 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:38 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:39 1/1:47:32:19:13:34:94.12%:99:2.2142E-17:49:2:0:2:34 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:29:15:44 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:54:0%:99:1E0:42:54:17:37:54 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:41 0/0:0:0:0:0:44:0%:81:1E0:44:44:14:30:45 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:55:0%:99:1E0:40:55:31:24:55 0/0:0:0:0:0:53:0%:99:1E0:41:53:22:31:53 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:42 0/0:0:0:0:0:48:0%:89:1E0:43:48:17:31:48 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:47 0/0:0:0:0:0:56:0%:99:1E0:40:56:28:28:57 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:44 0/0:0:0:0:0:47:0%:89:1E0:40:47:28:19:48 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:42 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:43:0%:82:1E0:38:43:17:26:45 0/0:0:0:0:0:41:0%:78:1E0:44:41:27:14:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:38 0/0:0:0:0:0:19:0%:37:1E0:38:19:4:15:19 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:44:0%:81:1E0:46:44:26:18:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:48 0/0:0:0:0:0:60:0%:99:1E0:41:60:31:29:62 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 MTB_anc 157862 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|htdZ_Rv0130|gene136|transcript|Transcript_gene136|Coding|1/1|c.16T>G|p.Ser6Ala|16/456|16/456|6/151||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.157862T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.157862T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:52 0/0:0:0:0:0:13:0%:25:1E0:44:13:7:6:13 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:45 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:20 0/0:0:0:0:0:15:0%:29:1E0:43:15:11:4:15 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:32 0/0:0:0:0:0:35:0%:67:1E0:49:35:20:15:35 0/0:0:0:0:0:41:0%:78:1E0:50:41:22:19:42 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:47 0/0:0:0:0:0:17:0%:33:1E0:53:17:8:9:18 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:25 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:31 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:18 0/0:0:0:0:0:63:0%:99:1E0:44:63:33:30:63 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:34:1:1:0:37:2.7%:59:5E-1:46:36:19:17:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:19:0%:37:1E0:47:19:14:5:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:11:0%:22:1E0:47:11:5:6:12 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:26:0%:47:1E0:50:26:15:11:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:56:0%:99:1E0:48:56:30:26:56 0/0:0:0:0:0:58:0%:99:1E0:46:58:24:34:59 0/0:0:0:0:0:51:0%:97:1E0:43:51:26:25:53 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 1/1:46:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:19 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:38 0/0:0:0:0:0:44:0%:81:1E0:45:44:17:27:45 0/0:0:0:0:0:15:0%:29:1E0:50:15:10:5:15 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:7:15:22 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:23:0%:44:1E0:49:23:11:12:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:38 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:37:0%:70:1E0:51:37:13:24:38 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:27 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:57:0%:99:1E0:43:57:30:27:59 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:49 0/0:0:0:0:0:54:0%:99:1E0:46:54:33:21:55 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:21:0%:40:1E0:53:21:12:9:21 0/0:0:0:0:0:17:0%:33:1E0:53:17:14:3:17 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:40 0/0:0:0:0:0:21:0%:40:1E0:49:21:7:14:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:36 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:14:0%:25:1E0:53:14:7:7:15 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:34 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:38 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:26 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:49 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:54 0/0:0:0:0:0:36:0%:66:1E0:40:36:12:24:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:19:0%:37:1E0:47:19:14:5:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:8:19:28 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:30 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:44 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:25:14:40 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:46 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:38 0/0:0:0:0:0:58:0%:99:1E0:43:58:26:32:60 0/0:0:0:0:0:68:0%:99:1E0:41:68:33:35:68 0/0:0:0:0:0:18:0%:32:1E0:42:18:5:13:18 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:27 0/0:0:0:0:0:56:0%:99:1E0:39:56:28:28:58 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:43 0/0:0:0:0:0:50:0%:92:1E0:40:50:29:21:52 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:38 0/0:0:0:0:0:46:0%:85:1E0:41:46:18:28:47 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:38 0/0:0:0:0:0:51:0%:97:1E0:41:51:24:27:53 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:46 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:68:0%:99:1E0:39:68:36:32:68 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:41 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:40 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:49 0/0:0:0:0:0:30:0%:55:1E0:44:30:22:8:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:16:7:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:24 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:46:0%:85:1E0:39:46:17:29:46 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:43 0/0:0:0:0:0:54:0%:99:1E0:44:54:31:23:54 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 MTB_anc 158792 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|fadE1_Rv0131c|gene137|transcript|Transcript_gene137|Coding|1/1|c.867G>A|p.Met289Ile|867/1344|867/1344|289/447||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.158792C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.158792C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:52 0/0:60:1:0:1:22:4.55%:31:5E-1:50:21:11:10:22 0/0:60:1:1:0:52:1.92%:83:5E-1:46:51:18:33:52 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:34:0%:62:1E0:50:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:36:0%:66:1E0:50:36:18:18:37 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:23 0/0:0:0:0:0:38:0%:70:1E0:54:38:20:18:38 0/0:0:0:0:0:51:0%:97:1E0:43:51:31:20:52 0/0:0:0:0:0:20:0%:36:1E0:53:20:9:11:20 0/0:0:0:0:0:72:0%:99:1E0:43:72:28:44:73 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:63:0%:99:1E0:43:63:29:34:63 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:48:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:24:0%:44:1E0:52:24:13:11:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:32:0%:59:1E0:48:32:21:11:32 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:49 0/0:0:0:0:0:57:0%:99:1E0:47:57:29:28:58 0/0:0:0:0:0:48:0%:89:1E0:46:48:18:30:49 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:55 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:60:1:1:0:30:3.33%:44:5E-1:44:29:17:12:31 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:41 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:30 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:40:0%:74:1E0:47:40:15:25:40 0/0:0:0:0:0:14:0%:25:1E0:50:14:7:7:14 0/0:0:0:0:0:53:0%:99:1E0:43:53:25:28:53 0/0:0:0:0:0:10:0%:17:1E0:46:10:5:5:10 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:58:0%:99:1E0:46:58:24:34:59 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:46 0/0:39:1:1:0:37:2.7%:59:5E-1:42:36:20:16:37 0/0:0:0:0:0:50:0%:92:1E0:42:50:22:28:51 0/0:0:0:0:0:38:0%:70:1E0:51:38:24:14:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:11:28:39 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:47 0/0:0:0:0:0:21:0%:40:1E0:51:21:12:9:21 0/0:0:0:0:0:47:0%:89:1E0:48:47:22:25:47 0/0:0:0:0:0:52:0%:96:1E0:47:52:23:29:53 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:25 0/0:0:0:0:0:43:0%:82:1E0:47:43:27:16:43 0/0:0:0:0:0:19:0%:37:1E0:49:19:13:6:19 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:24 0/0:0:0:0:0:46:0%:85:1E0:48:46:16:30:46 0/1:52:24:11:13:36:66.67%:98:1.5744E-10:47:12:8:4:37 0/0:0:0:0:0:22:0%:40:1E0:50:22:12:10:22 0/0:0:0:0:0:39:0%:74:1E0:50:39:23:16:39 0/0:0:0:0:0:55:0%:99:1E0:41:55:24:31:56 0/0:39:1:1:0:35:2.86%:55:5E-1:46:34:21:13:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:23 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:42 0/0:0:0:0:0:45:0%:85:1E0:47:45:26:19:45 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:43:0%:82:1E0:48:43:17:26:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:21:10:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:30:0%:55:1E0:47:30:21:9:30 0/0:0:0:0:0:29:0%:55:1E0:54:29:15:14:29 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:55 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:43 0/0:0:0:0:0:53:0%:99:1E0:42:53:26:27:53 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:42 0/0:0:0:0:0:45:0%:85:1E0:46:45:23:22:46 0/0:0:0:0:0:33:0%:63:1E0:41:33:9:24:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:50:0%:92:1E0:39:50:28:22:51 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:15:30:45 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:60:0%:99:1E0:42:60:20:40:61 0/0:0:0:0:0:55:0%:99:1E0:44:55:25:30:55 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:43 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:46 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:50 0/0:0:0:0:0:48:0%:89:1E0:38:48:27:21:48 0/0:0:0:0:0:66:0%:99:1E0:40:66:35:31:68 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:46 0/0:0:0:0:0:50:0%:92:1E0:41:50:16:34:50 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:45 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:45 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:48 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:50 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 0/0:0:0:0:0:72:0%:99:1E0:38:72:39:33:72 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:43 0/0:0:0:0:0:58:0%:99:1E0:42:58:29:29:59 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:40:0%:74:1E0:45:40:13:27:40 0/0:0:0:0:0:61:0%:99:1E0:44:61:32:29:61 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 MTB_anc 164676 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|cyp138_Rv0136|gene142|transcript|Transcript_gene142|Coding|1/1|c.1311G>A|p.Val437Val|1311/1326|1311/1326|437/441||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.164676G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.164676G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:61:29:32:61:100%:99:2.609E-36:0:0:0:0:62 1/1:46:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:74:28:46:74:100%:99:4.2804E-44:0:0:0:0:74 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:54:27:27:55:98.18%:99:5.6837E-31:30:1:1:0:56 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:18:15:34:97.06%:99:1.2301E-18:30:1:0:1:34 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:61:25:36:61:100%:99:2.609E-36:0:0:0:0:63 1/1:38:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:34:15:19:35:97.14%:99:3.2089E-19:36:1:1:0:35 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 165919 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|Rv0139_Rv0139|gene145|transcript|Transcript_gene145|Coding|1/1|c.93T>C|p.Gly31Gly|93/1023|93/1023|31/340||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.165919T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.165919T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:43:54:28:26:58 0/0:0:0:0:0:20:0%:36:1E0:51:20:9:11:20 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:45 0/0:60:1:0:1:18:5.56%:24:5E-1:47:17:9:8:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:31 0/0:0:0:0:0:43:0%:82:1E0:46:43:26:17:44 0/0:0:0:0:0:18:0%:32:1E0:51:18:6:12:20 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:35:0%:67:1E0:46:35:23:12:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:41 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:41 0/0:0:0:0:0:64:0%:99:1E0:45:64:34:30:64 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:40 0/0:0:0:0:0:13:0%:25:1E0:44:13:10:3:13 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:40 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:54:0%:99:1E0:48:54:21:33:59 0/0:0:0:0:0:52:0%:96:1E0:47:52:25:27:52 0/0:0:0:0:0:44:0%:81:1E0:47:44:26:18:45 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:42 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:50 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:36 0/0:0:0:0:0:48:0%:89:1E0:47:48:22:26:49 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:41 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:49 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:52 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:51:0%:97:1E0:46:51:22:29:52 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:47 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:37 0/0:0:0:0:0:31:0%:59:1E0:50:31:16:15:32 0/0:0:0:0:0:18:0%:32:1E0:48:18:12:6:18 0/0:0:0:0:0:33:0%:63:1E0:52:33:16:17:34 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:47 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:43 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:21 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:43 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:43 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:14:0%:25:1E0:46:14:9:5:15 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:21:6:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:14:26:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:43 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:41 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:21 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:42 0/0:0:0:0:0:44:0%:81:1E0:38:44:24:20:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:26 0/0:0:0:0:0:59:0%:99:1E0:42:59:32:27:60 0/0:0:0:0:0:53:0%:99:1E0:43:53:28:25:53 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:28 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:41 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:52 0/0:0:0:0:0:41:0%:78:1E0:38:41:18:23:46 0/0:0:0:0:0:44:0%:81:1E0:38:44:22:22:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:49:0%:93:1E0:40:49:27:22:54 0/0:0:0:0:0:48:0%:89:1E0:37:48:21:27:51 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:22:17:43 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:28:12:41 0/0:0:0:0:0:53:0%:99:1E0:39:53:27:26:57 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:43 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:50 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:41 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:27 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:33 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:47:0%:89:1E0:41:47:29:18:48 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:45 MTB_anc 166518 . G A . PASS AC=68;AF=0.227;AN=300;ANN=A|missense_variant|MODERATE|Rv0139_Rv0139|gene145|transcript|Transcript_gene145|Coding|1/1|c.692G>A|p.Arg231Gln|692/1023|692/1023|231/340||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.166518G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.166518G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:43:54:29:25:54 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:19:0%:37:1E0:45:19:4:15:19 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:13:0%:25:1E0:48:13:4:9:13 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:51 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:26 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:21 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:38 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:33 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:25 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:51:33:24:9:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:48 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:51 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:24:0%:44:1E0:43:24:16:8:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:46:0%:85:1E0:39:46:19:27:46 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:47 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:48:0%:89:1E0:42:48:17:31:49 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:49 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 1/1:47:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:41 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:56:16:40:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:34 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:22 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 1/1:38:39:17:22:40:97.5%:99:3.8137E-22:60:1:1:0:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:14:27:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:38:1:1:0:36:2.78%:55:5E-1:47:35:17:18:36 0/0:0:0:0:0:24:0%:44:1E0:51:24:12:12:24 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 0/0:0:0:0:0:48:0%:89:1E0:38:48:27:21:48 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:39 0/0:0:0:0:0:46:0%:85:1E0:40:46:18:28:46 0/0:0:0:0:0:25:0%:48:1E0:42:25:8:17:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:13:27:41 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:23 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:26 0/0:0:0:0:0:36:0%:66:1E0:47:36:11:25:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:7:18:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:24 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:30 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:39 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:37 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:40 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:17 0/0:0:0:0:0:62:0%:99:1E0:40:62:27:35:62 1/1:40:61:26:35:61:100%:99:2.609E-36:0:0:0:0:63 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:23 0/0:0:0:0:0:17:0%:33:1E0:42:17:4:13:17 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:15:24:39 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:30 0/0:0:0:0:0:45:0%:85:1E0:38:45:19:26:45 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:39 0/0:0:0:0:0:45:0%:85:1E0:40:45:19:26:45 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:33 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:60:0%:99:1E0:39:60:29:31:60 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:44 0/0:0:0:0:0:38:0%:70:1E0:39:38:15:23:38 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:38:1:1:0:45:2.22%:73:5E-1:39:44:27:17:47 0/0:33:1:1:0:25:4%:38:5E-1:40:24:15:9:25 MTB_anc 169669 . C A . PASS AC=2;AF=6.711e-03;AN=298;ANN=A|stop_gained|HIGH|Rv0143c_Rv0143c|gene149|transcript|Transcript_gene149|Coding|1/1|c.514G>T|p.Glu172*|514/1479|514/1479|172/492||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.169669C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.169669C>A||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:36:39:23:16:44 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:16 0/0:0:0:0:0:32:0%:59:1E0:37:32:20:12:34 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:19 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:26 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:23 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:15 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:21 0/0:0:0:0:0:19:0%:37:1E0:38:19:13:6:21 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:28 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:24 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:26 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:16 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:19 0/0:0:0:0:0:27:0%:52:1E0:37:27:19:8:27 0/0:0:0:0:0:34:0%:62:1E0:39:34:22:12:38 0/0:0:0:0:0:25:0%:48:1E0:36:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:25 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:33 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:16:0%:29:1E0:42:16:11:5:16 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:22 0/0:0:0:0:0:41:0%:78:1E0:38:41:25:16:41 0/0:0:0:0:0:39:0%:74:1E0:38:39:16:23:43 0/0:0:0:0:0:40:0%:74:1E0:36:40:24:16:42 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:23 0/0:0:0:0:0:23:0%:44:1E0:37:23:16:7:24 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:17 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:32 0/0:0:0:0:0:41:0%:78:1E0:37:41:24:17:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:37 0/0:0:0:0:0:48:0%:89:1E0:37:48:25:23:52 0/0:0:0:0:0:29:0%:55:1E0:36:29:14:15:29 0/0:0:0:0:0:47:0%:89:1E0:38:47:18:29:48 0/0:0:0:0:0:29:0%:55:1E0:37:29:21:8:30 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:26 0/0:0:0:0:0:30:0%:55:1E0:36:30:14:16:33 0/0:0:0:0:0:28:0%:51:1E0:38:28:19:9:32 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:39:40:26:14:41 0/0:0:0:0:0:36:0%:66:1E0:37:36:20:16:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:13:0%:25:1E0:43:13:8:5:13 0/0:0:0:0:0:35:0%:67:1E0:37:35:24:11:37 0/0:0:0:0:0:18:0%:32:1E0:39:18:12:6:19 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:31 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:38 0/0:0:0:0:0:44:0%:81:1E0:36:44:25:19:46 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:24 0/0:0:0:0:0:26:0%:47:1E0:37:26:17:9:27 0/0:0:0:0:0:41:0%:78:1E0:38:41:28:13:43 0/0:0:0:0:0:34:0%:62:1E0:38:34:20:14:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:30 0/0:0:0:0:0:37:0%:70:1E0:36:37:23:14:39 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:29 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:31 0/0:0:0:0:0:58:0%:99:1E0:38:58:31:27:60 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:23 0/0:0:0:0:0:31:0%:59:1E0:36:31:19:12:33 0/0:30:1:0:1:18:5.56%:24:5E-1:41:17:11:6:19 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:16 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:30 0/0:0:0:0:0:37:0%:70:1E0:37:37:22:15:40 0/0:0:0:0:0:23:0%:44:1E0:36:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:37:33:15:18:34 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:32:0%:59:1E0:37:32:18:14:34 0/0:0:0:0:0:30:0%:55:1E0:36:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:28 0/0:0:0:0:0:36:0%:66:1E0:37:36:22:14:40 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:34 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:22 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:24 0/0:0:0:0:0:25:0%:48:1E0:36:25:13:12:27 0/0:0:0:0:0:28:0%:51:1E0:36:28:16:12:29 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:13 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:22 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:26 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:38 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:17 0/0:0:0:0:0:39:0%:74:1E0:37:39:26:13:42 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:28 0/0:0:0:0:0:52:0%:96:1E0:39:52:25:27:53 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:21 0/0:0:0:0:0:19:0%:37:1E0:35:19:9:10:20 0/0:0:0:0:0:26:0%:47:1E0:35:26:13:13:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:9:20:31 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:23 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:25 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:20 0/0:0:0:0:0:22:0%:40:1E0:37:22:18:4:23 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:21 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:18 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:35 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:41 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:30 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:23 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:28 0/0:0:0:0:0:27:0%:52:1E0:37:27:22:5:27 0/0:0:0:0:0:32:0%:59:1E0:36:32:22:10:35 0/0:0:0:0:0:28:0%:51:1E0:36:28:21:7:31 0/0:0:0:0:0:29:0%:55:1E0:36:29:19:10:32 0/0:0:0:0:0:19:0%:37:1E0:38:19:14:5:19 0/0:0:0:0:0:41:0%:78:1E0:36:41:18:23:44 0/0:0:0:0:0:43:0%:82:1E0:36:43:23:20:44 0/0:0:0:0:0:29:0%:55:1E0:36:29:13:16:31 0/0:0:0:0:0:13:0%:25:1E0:37:13:9:4:14 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:30 0/0:0:0:0:0:21:0%:40:1E0:36:21:18:3:25 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:35 0/0:0:0:0:0:23:0%:44:1E0:35:23:14:9:24 0/0:0:0:0:0:27:0%:52:1E0:34:27:17:10:27 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:27 0/0:0:0:0:0:35:0%:67:1E0:36:35:27:8:39 0/0:0:0:0:0:15:0%:29:1E0:38:15:11:4:16 0/0:0:0:0:0:26:0%:47:1E0:36:26:21:5:27 0/0:0:0:0:0:27:0%:52:1E0:36:27:17:10:28 0/0:0:0:0:0:32:0%:59:1E0:36:32:22:10:36 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:21 0/0:0:0:0:0:31:0%:59:1E0:36:31:24:7:32 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:19 0/0:0:0:0:0:29:0%:55:1E0:38:29:22:7:29 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:33 0/0:0:0:0:0:22:0%:40:1E0:36:22:12:10:23 0/0:0:0:0:0:30:0%:55:1E0:37:30:16:14:32 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:36 0/0:0:0:0:0:26:0%:47:1E0:36:26:18:8:30 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:29 0/0:0:0:0:0:48:0%:89:1E0:37:48:27:21:49 0/0:0:0:0:0:33:0%:63:1E0:37:33:22:11:35 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:18 MTB_anc 177596 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|PE1_Rv0151c|gene157|transcript|Transcript_gene157|Coding|1/1|c.1714A>G|p.Ile572Val|1714/1767|1714/1767|572/588||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.177596T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.177596T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:53:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:49:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:15:12:28:96.43%:99:3.7915E-15:38:1:0:1:28 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:49:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:30:16:14:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:60:33:27:60:100%:99:1.035E-35:0:0:0:0:63 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:63:34:29:63:100%:99:1.657E-37:0:0:0:0:65 1/1:40:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:62:40:22:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:23:17:41:97.56%:99:9.8874E-23:60:1:1:0:41 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:54:30:24:55:98.18%:99:5.6837E-31:37:1:0:1:55 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 MTB_anc 178946 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PE1_Rv0151c|gene157|transcript|Transcript_gene157|Coding|1/1|c.364G>A|p.Ala122Thr|364/1767|364/1767|122/588||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.178946C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.178946C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:46:33:13:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:28:19:9:30:93.33%:99:4.194E-15:37:2:2:0:31 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:67:34:33:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:49:34:15:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:57:41:16:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:52:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:45:33:12:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:63:35:28:63:100%:99:1.657E-37:0:0:0:0:65 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:43:32:11:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 181125 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|intergenic_region|MODIFIER|PE2_Rv0152c-ptbB_Rv0153c|gene158-gene159|intergenic_region|gene158-gene159|||n.181125C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:41:43:27:16:47 0/0:0:0:0:0:16:0%:29:1E0:52:16:5:11:16 0/0:0:0:0:0:50:0%:92:1E0:46:50:24:26:50 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:51:30:10:20:30 0/0:0:0:0:0:13:0%:25:1E0:44:13:8:5:13 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:53:26:14:12:26 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:0:0:0:0:53:0%:99:1E0:44:53:25:28:53 0/0:0:0:0:0:12:0%:21:1E0:50:12:6:6:12 0/0:0:0:0:0:61:0%:99:1E0:46:61:27:34:61 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 0/0:0:0:0:0:33:0%:63:1E0:52:33:15:18:33 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:25 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:57:0%:99:1E0:42:57:22:35:58 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:24 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:26:0%:47:1E0:46:26:7:19:26 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:47 0/0:0:0:0:0:63:0%:99:1E0:46:63:31:32:64 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:66:0%:99:1E0:46:66:30:36:66 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:50:0%:92:1E0:46:50:29:21:50 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:49:0%:93:1E0:44:49:29:20:50 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:9:0%:18:1E0:41:9:4:5:9 0/0:0:0:0:0:52:0%:96:1E0:45:52:22:30:52 0/0:0:0:0:0:27:0%:52:1E0:44:27:8:19:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:67:0%:99:1E0:46:67:36:31:67 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:41 0/0:60:1:1:0:41:2.44%:66:5E-1:46:40:21:19:41 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:46 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:45 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:53:0%:99:1E0:48:53:27:26:53 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:25 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:29 0/0:0:0:0:0:17:0%:33:1E0:51:17:9:8:17 0/0:39:1:1:0:37:2.7%:59:5E-1:48:36:20:16:37 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:45 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:41 0/0:60:1:0:1:29:3.45%:45:5E-1:46:28:16:12:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:45 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:19:11:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:14:0%:25:1E0:44:14:7:7:14 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:24 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:21 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:16 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:24:13:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:40 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:43 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:19 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:36 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:28 0/0:32:1:1:0:57:1.75%:95:5E-1:41:56:28:28:58 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:47 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:46 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:38 0/0:0:0:0:0:33:0%:63:1E0:38:33:8:25:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:32 0/0:0:0:0:0:43:0%:82:1E0:38:43:25:18:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:59:0%:99:1E0:41:59:26:33:62 0/0:0:0:0:0:34:0%:62:1E0:39:34:22:12:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:41 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:64:0%:99:1E0:38:64:24:40:64 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:51 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:50:0%:92:1E0:42:50:31:19:51 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:51 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 MTB_anc 184314 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|pntAa_Rv0155|gene161|transcript|Transcript_gene161|Coding|1/1|c.693C>T|p.Arg231Arg|693/1101|693/1101|231/366||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.184314C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.184314C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:48 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:25 0/0:0:0:0:0:27:0%:52:1E0:50:27:10:17:27 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:15:0%:29:1E0:47:15:8:7:15 0/0:60:1:1:0:36:2.78%:55:5E-1:45:35:19:16:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:47:0%:89:1E0:39:47:22:25:47 0/0:0:0:0:0:16:0%:29:1E0:45:16:11:5:16 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:42 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:39:21:6:15:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:57:0%:99:1E0:42:57:27:30:59 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:21:8:29 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:46 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:54 0/0:0:0:0:0:25:0%:48:1E0:43:25:6:19:27 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:41 0/0:0:0:0:0:43:0%:82:1E0:39:43:25:18:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:14:28:42 0/0:60:1:0:1:27:3.7%:41:5E-1:45:26:16:10:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:18:0%:32:1E0:49:18:12:6:19 0/0:0:0:0:0:47:0%:89:1E0:38:47:26:21:48 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:25:6:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:43 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:26 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:47 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:20:9:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:38 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:56:0%:99:1E0:43:56:29:27:58 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:16 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:23:10:33 0/0:0:0:0:0:18:0%:32:1E0:45:18:4:14:18 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:43:0%:82:1E0:39:43:27:16:46 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:52 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:24 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:19 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:54:0%:99:1E0:39:54:34:20:57 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:18 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:24 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:10:0%:17:1E0:35:10:3:7:10 0/0:60:1:0:1:29:3.45%:45:5E-1:42:28:15:13:29 0/0:0:0:0:0:24:0%:44:1E0:37:24:18:6:27 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:37 0/0:0:0:0:0:32:0%:59:1E0:37:32:15:17:33 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:30 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:15 0/0:0:0:0:0:57:0%:99:1E0:42:57:29:28:58 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:47 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:21 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:32 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:35 1/1:37:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:33:0%:63:1E0:38:33:22:11:33 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:37 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:24 0/0:0:0:0:0:36:0%:66:1E0:38:36:19:17:37 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:36 0/0:0:0:0:0:38:0%:70:1E0:36:38:26:12:40 0/0:0:0:0:0:18:0%:32:1E0:39:18:14:4:19 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:36 0/0:0:0:0:0:39:0%:74:1E0:38:39:23:16:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:36 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:20 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:28 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:16 0/0:0:0:0:0:31:0%:59:1E0:38:31:22:9:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:38:1:0:1:41:2.44%:66:5E-1:41:40:26:14:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 MTB_anc 187420 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0158_Rv0158|gene165|transcript|Transcript_gene165|Coding|1/1|c.636G>C|p.Lys212Asn|636/645|636/645|212/214||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.187420G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.187420G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:55:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:9:20:30:96.67%:99:2.6212E-16:39:1:1:0:30 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:47:14:33:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:50:25:25:51:98.04%:99:1.3013E-28:60:1:1:0:51 1/1:43:42:23:19:43:97.67%:99:6.6289E-24:38:1:1:0:43 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:69:34:35:69:100%:99:4.233E-41:0:0:0:0:69 1/1:49:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:60:35:25:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:52:25:27:53:98.11%:99:6.3169E-31:0:0:0:0:55 1/1:47:32:14:18:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:38:22:16:39:97.44%:99:1.4697E-21:33:1:1:0:39 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:54:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:51:23:28:52:98.08%:99:3.3479E-29:37:1:0:1:52 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:65:34:31:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 MTB_anc 195360 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|fadD5_Rv0166|gene173|transcript|Transcript_gene173|Coding|1/1|c.368C>T|p.Ala123Val|368/1665|368/1665|123/554||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.195360C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.195360C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:54:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:12:17:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:38:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 MTB_anc 196330 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|fadD5_Rv0166|gene173|transcript|Transcript_gene173|Coding|1/1|c.1338G>A|p.Leu446Leu|1338/1665|1338/1665|446/554||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.196330G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.196330G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:54:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:52:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:49:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:35:21:14:36:97.22%:99:8.9137E-21:0:0:0:0:38 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:41:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:44:57:20:37:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 199470 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|mce1A_Rv0169|gene176|transcript|Transcript_gene176|Coding|1/1|c.937G>T|p.Ala313Ser|937/1365|937/1365|313/454||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.199470G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.199470G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.199470G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:53:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:11:11:23:95.65%:99:2.9149E-12:38:1:1:0:24 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:68:29:39:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:17:19:37:97.3%:99:2.1762E-20:33:1:1:0:37 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:54:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:24:12:12:25:96%:99:3.101E-14:0:0:0:0:26 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:40:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:63:38:25:63:100%:99:1.657E-37:0:0:0:0:65 1/1:39:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:38:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:38:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:59 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 MTB_anc 199628 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|mce1A_Rv0169|gene176|transcript|Transcript_gene176|Coding|1/1|c.1095A>C|p.Ala365Ala|1095/1365|1095/1365|365/454||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.199628A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.199628A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.199628A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:15:0%:29:1E0:51:15:6:9:15 0/0:0:0:0:0:45:0%:85:1E0:47:45:27:18:45 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:33 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:37 0/0:0:0:0:0:47:0%:89:1E0:47:47:27:20:48 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:58:0%:99:1E0:43:58:28:30:58 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:21:0%:40:1E0:43:21:4:17:23 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:29 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:56:0%:99:1E0:45:56:27:29:56 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:47:39:13:26:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:60:0%:99:1E0:47:60:29:31:60 0/0:0:0:0:0:45:0%:85:1E0:48:45:27:18:49 0/0:0:0:0:0:49:0%:93:1E0:47:49:19:30:51 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:45 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 0/0:0:0:0:0:45:0%:85:1E0:47:45:21:24:45 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:22:0%:40:1E0:51:22:11:11:22 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:38 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:21 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:51 0/0:0:0:0:0:30:0%:55:1E0:43:30:7:23:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:39 0/0:0:0:0:0:47:0%:89:1E0:46:47:24:23:48 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:38 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:0:0:0:0:56:0%:99:1E0:46:56:31:25:56 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:46:35:10:25:35 0/0:0:0:0:0:54:0%:99:1E0:48:54:26:28:54 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:20 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:31 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:18 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:19 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:23 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:33 0/0:0:0:0:0:52:0%:96:1E0:46:52:27:25:53 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:22 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:35:0%:67:1E0:49:35:12:23:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:19:8:27 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:8:24:32 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:39:0%:74:1E0:50:39:23:16:39 0/0:0:0:0:0:28:0%:51:1E0:49:28:9:19:29 0/0:0:0:0:0:43:0%:82:1E0:47:43:19:24:43 0/0:0:0:0:0:21:0%:40:1E0:52:21:9:12:21 0/0:0:0:0:0:52:0%:96:1E0:42:52:29:23:53 0/0:0:0:0:0:34:0%:62:1E0:46:34:12:22:34 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:53 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:36 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:45 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:43 0/0:0:0:0:0:39:0%:74:1E0:45:39:24:15:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/1:44:17:9:8:31:54.84%:64:3.5853E-7:43:14:7:7:32 0/1:43:21:14:7:48:43.75%:75:2.8521E-8:43:27:10:17:48 0/0:0:0:0:0:59:0%:99:1E0:43:59:36:23:59 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:60:0%:99:1E0:41:60:31:29:62 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:46 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:49 0/0:0:0:0:0:44:0%:81:1E0:38:44:24:20:46 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:47 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:40 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:43 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:47 0/0:0:0:0:0:58:0%:99:1E0:39:58:29:29:58 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:60:0%:99:1E0:38:60:29:31:60 0/0:0:0:0:0:57:0%:99:1E0:43:57:32:25:58 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:43 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:43 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:47 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:29 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:43 0/0:0:0:0:0:56:0%:99:1E0:47:56:26:30:56 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:49 0/0:0:0:0:0:40:0%:74:1E0:39:40:28:12:40 MTB_anc 200530 . C T . PASS AC=76;AF=0.253;AN=300;ANN=T|synonymous_variant|LOW|mce1B_Rv0170|gene177|transcript|Transcript_gene177|Coding|1/1|c.636C>T|p.Val212Val|636/1041|636/1041|212/346||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.200530C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.200530C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.200530C>T||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:68:0%:99:1E0:48:68:40:28:68 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:34 1/1:53:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 1/1:50:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:48 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:26:0%:47:1E0:50:26:14:12:26 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:47:0%:89:1E0:45:47:23:24:48 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:14:0%:25:1E0:43:14:3:11:14 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 1/1:47:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:22:0%:40:1E0:50:22:13:9:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:35 0/0:0:0:0:0:21:0%:40:1E0:53:21:11:10:21 0/0:37:1:0:1:23:4.35%:34:5E-1:47:22:12:10:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:46:0%:85:1E0:51:46:20:26:46 0/0:32:1:1:0:39:2.56%:62:5E-1:43:38:19:19:41 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:36 0/0:0:0:0:0:49:0%:93:1E0:43:49:30:19:49 0/0:0:0:0:0:62:0%:99:1E0:46:62:29:33:63 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:35 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:18:7:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:39 0/0:60:1:0:1:48:2.08%:76:5E-1:46:47:30:17:48 0/0:0:0:0:0:30:0%:55:1E0:51:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 1/1:48:29:22:7:30:96.67%:99:2.6212E-16:39:1:0:1:30 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:18:0%:32:1E0:47:18:13:5:18 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:25 0/0:0:0:0:0:56:0%:99:1E0:45:56:24:32:56 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:32 0/0:0:0:0:0:43:0%:82:1E0:50:43:18:25:43 0/0:0:0:0:0:40:0%:74:1E0:49:40:19:21:40 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:53:34:13:21:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 1/1:48:37:17:20:38:97.37%:99:5.6582E-21:32:1:1:0:38 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:45:0%:85:1E0:48:45:24:21:45 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:40:0%:74:1E0:49:40:21:19:40 0/0:0:0:0:0:22:0%:40:1E0:50:22:9:13:23 0/0:0:0:0:0:34:0%:63:1E0:46:33:17:16:34 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 1/1:44:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:47 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:50:0%:92:1E0:44:50:29:21:50 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:51:0%:97:1E0:46:51:23:28:51 0/0:0:0:0:0:39:0%:74:1E0:48:39:24:15:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:40:0%:74:1E0:40:40:26:14:40 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:48 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:46 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:46 0/0:0:0:0:0:44:0%:81:1E0:47:44:25:19:45 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:61:0%:99:1E0:45:61:30:31:64 0/0:0:0:0:0:58:0%:99:1E0:44:58:27:31:58 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:36 0/0:0:0:0:0:58:0%:99:1E0:43:58:29:29:61 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:43 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:53 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:46 0/0:0:0:0:0:49:0%:93:1E0:43:49:33:16:49 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:60:1:1:0:41:2.44%:66:5E-1:42:40:23:17:42 0/0:0:0:0:0:41:0%:78:1E0:37:41:28:13:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:46 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:36 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:41 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:44 0/0:37:1:0:1:30:3.33%:44:5E-1:41:29:16:13:31 0/0:60:1:1:0:51:1.96%:84:5E-1:40:50:25:25:52 1/1:46:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:51:0%:97:1E0:45:51:24:27:51 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:49 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:37 0/0:0:0:0:0:39:0%:74:1E0:46:39:25:14:39 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 202197 . G A . PASS AC=294;AF=1.00;AN=294;ANN=A|synonymous_variant|LOW|mce1C_Rv0171|gene178|transcript|Transcript_gene178|Coding|1/1|c.1266G>A|p.Thr422Thr|1266/1548|1266/1548|422/515||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.202197G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.202197G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.202197G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:14:13:28:96.43%:99:3.7915E-15:35:1:1:0:31 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:34:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:32:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:34:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:33:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:35:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:35:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:34:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:36:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:35:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:34:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:35:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:35:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:34:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:32:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:34:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:35:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:35:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:35:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 MTB_anc 206481 . G C . PASS AC=275;AF=0.955;AN=288;ANN=C|synonymous_variant|LOW|mce1F_Rv0174|gene181|transcript|Transcript_gene181|Coding|1/1|c.1251G>C|p.Pro417Pro|1251/1548|1251/1548|417/515||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.206481G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.206481G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.206481G>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:36:8:6:2:9:88.89%:36:2.0568E-4:35:1:1:0:11 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:25:18:7:27:92.59%:99:2.0853E-13:34:2:0:2:27 1/1:45:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 0/1:40:16:10:6:18:88.89%:76:2.0936E-8:33:2:1:1:18 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:37:7:2:5:9:77.78%:29:1.1312E-3:47:2:1:1:9 1/1:40:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:13:10:3:14:92.86%:64:3.7391E-7:37:1:1:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:28:13:15:29:96.55%:99:9.9776E-16:33:1:1:0:30 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:24:13:11:25:96%:99:2.0568E-13:31:1:1:0:27 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:16:9:7:17:94.12%:81:7.7134E-9:34:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 0/1:39:16:10:6:18:88.89%:76:2.0936E-8:32:2:2:0:18 0/1:38:8:5:3:10:80%:34:3.5723E-4:33:2:0:2:11 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:42:11:5:6:12:91.67%:53:4.8074E-6:34:1:0:1:12 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:29:19:10:30:96.67%:99:2.6212E-16:26:1:1:0:33 1/1:39:22:10:12:24:91.67%:99:1.0078E-11:35:2:1:1:24 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:18:8:10:19:94.74%:92:5.6585E-10:32:1:1:0:20 1/1:43:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:9:5:4:10:90%:42:5.9538E-5:36:1:0:1:11 1/1:39:13:8:5:14:92.86%:70:9.6148E-8:0:0:0:0:16 1/1:38:14:5:9:15:93.33%:69:1.0315E-7:60:1:1:0:15 1/1:38:27:15:12:29:93.1%:99:1.5465E-14:35:2:1:1:30 0/1:36:7:3:4:9:77.78%:29:1.1312E-3:46:2:1:1:9 1/1:42:12:6:6:13:92.31%:58:1.3461E-6:33:1:0:1:14 1/1:40:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:39:14:6:8:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:14:8:6:15:93.33%:69:1.0315E-7:37:1:1:0:15 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:18:8:10:19:94.74%:92:5.6585E-10:32:1:1:0:20 1/1:40:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:22:14:8:24:91.67%:99:1.0078E-11:34:2:2:0:24 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:11:5:6:12:91.67%:53:4.8074E-6:34:1:0:1:12 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:44:7:4:3:8:87.5%:31:6.993E-4:33:1:0:1:10 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:38:15:4:11:17:88.24%:75:2.8282E-8:34:1:1:0:17 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:38:14:4:10:15:93.33%:69:1.0315E-7:37:1:1:0:18 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:14:10:4:15:93.33%:69:1.0315E-7:33:1:0:1:15 1/1:39:9:4:5:10:90%:42:5.9538E-5:35:1:1:0:11 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:18:8:10:19:94.74%:92:5.6585E-10:34:1:1:0:20 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 0/1:37:17:10:7:19:89.47%:82:5.9414E-9:33:2:0:2:19 1/1:37:21:13:8:22:95.45%:99:1.0931E-11:37:1:1:0:23 1/1:37:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:10:5:5:11:90.91%:47:1.7011E-5:33:1:0:1:12 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:24:16:8:25:96%:99:2.0568E-13:32:1:0:1:26 0/1:41:13:5:8:15:86.67%:60:8.7675E-7:33:2:1:1:16 1/1:36:14:8:6:15:93.33%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:22:15:7:24:91.67%:99:1.0078E-11:48:2:0:2:24 1/1:36:11:6:5:12:91.67%:53:4.8074E-6:37:1:1:0:12 1/1:41:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:17:7:10:18:94.44%:86:2.0936E-9:33:1:0:1:20 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:35:15:8:7:16:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:39:12:6:6:13:92.31%:58:1.3461E-6:33:1:1:0:14 1/1:39:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:16:6:10:17:94.12%:81:7.7134E-9:33:1:0:1:17 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:12 0/1:37:14:9:5:16:87.5%:65:2.5454E-7:34:2:0:2:19 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:38:16:7:9:17:94.12%:81:7.7134E-9:32:1:1:0:20 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:23:14:9:24:95.83%:99:7.7525E-13:33:1:0:1:26 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 0/1:36:13:8:5:15:86.67%:60:8.7675E-7:32:2:1:1:15 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:18:8:10:19:94.74%:92:5.6585E-10:33:1:0:1:21 1/1:36:14:6:8:15:93.33%:69:1.0315E-7:33:1:0:1:18 1/1:37:16:7:9:17:94.12%:81:7.7134E-9:33:1:0:1:17 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:14:7:7:15:93.33%:69:1.0315E-7:33:1:1:0:15 1/1:37:19:10:9:20:95%:98:1.5234E-10:34:1:0:1:21 1/1:36:18:15:3:20:90%:87:1.6758E-9:32:2:1:1:20 1/1:37:20:15:5:21:95.24%:99:4.0873E-11:34:1:0:1:23 1/1:38:12:7:5:13:92.31%:58:1.3461E-6:37:1:1:0:14 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 0/1:37:15:12:3:17:88.24%:71:7.3277E-8:30:2:1:1:18 1/1:38:26:17:9:27:96.3%:99:1.4382E-14:33:1:1:0:28 1/1:37:26:18:8:28:92.86%:99:5.6872E-14:32:2:1:1:28 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 MTB_anc 206484 . T G . PASS AC=286;AF=0.986;AN=290;ANN=G|synonymous_variant|LOW|mce1F_Rv0174|gene181|transcript|Transcript_gene181|Coding|1/1|c.1254T>G|p.Gly418Gly|1254/1548|1254/1548|418/515||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.206484T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.206484T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.206484T>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:25:18:7:27:96.15%:99:5.4444E-14:34:1:0:1:27 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:16:10:6:18:94.12%:81:7.7134E-9:32:1:0:1:18 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 0/1:36:7:2:5:9:77.78%:29:1.1312E-3:34:2:1:1:9 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:27:13:14:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:16:9:7:17:94.12%:81:7.7134E-9:35:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:16:10:6:18:100%:87:1.6637E-9:0:0:0:0:18 0/1:36:8:5:3:9:88.89%:36:2.0568E-4:32:1:0:1:10 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:11:5:6:12:91.67%:53:4.8074E-6:34:1:0:1:12 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:21:9:12:22:95.45%:99:1.0931E-11:33:1:0:1:23 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:17:7:10:18:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:27:16:11:28:96.43%:99:3.7915E-15:33:1:0:1:28 0/1:37:7:3:4:9:87.5%:31:6.993E-4:60:1:0:1:9 1/1:40:13:7:6:14:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:12:7:5:13:92.31%:58:1.3461E-6:30:1:1:0:15 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:17:8:9:18:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:10:5:5:11:90.91%:47:1.7011E-5:35:1:0:1:12 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:9:6:3:10:90%:42:5.9538E-5:33:1:0:1:10 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:33:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:13:9:4:14:92.86%:64:3.7391E-7:32:1:0:1:15 1/1:38:9:5:4:10:90%:42:5.9538E-5:37:1:1:0:10 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:18:8:10:19:94.74%:92:5.6585E-10:34:1:1:0:20 1/1:35:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 0/1:37:17:10:7:19:89.47%:82:5.9414E-9:33:2:0:2:19 1/1:36:22:14:8:23:95.65%:99:2.9149E-12:32:1:1:0:23 1/1:37:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:23:17:6:24:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:40:12:4:8:14:92.31%:58:1.3461E-6:34:1:0:1:16 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:22:15:7:24:91.67%:99:1.0078E-11:48:2:0:2:24 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:18:7:11:19:94.74%:92:5.6585E-10:33:1:0:1:21 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:15:13:2:16:93.75%:75:2.8282E-8:24:1:1:0:16 1/1:35:16:12:4:17:94.12%:81:7.7134E-9:32:1:0:1:19 1/1:36:13:7:6:14:92.86%:64:3.7391E-7:33:1:0:1:14 1/1:37:13:6:7:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:26:11:15:27:96.3%:99:1.4382E-14:32:1:1:0:28 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:17:6:11:18:94.44%:86:2.0936E-9:33:1:0:1:18 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:10:9:1:11:90.91%:47:1.7011E-5:35:1:1:0:12 1/1:37:18:10:8:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:24:15:9:25:96%:99:2.0568E-13:32:1:0:1:25 1/1:35:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:13:8:5:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:17:9:8:18:94.44%:86:2.0936E-9:32:1:0:1:18 1/1:38:16:7:9:17:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:6:7:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:17:14:3:18:94.44%:86:2.0936E-9:37:1:1:0:20 1/1:34:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:11:6:5:12:91.67%:53:4.8074E-6:24:1:1:0:12 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:15:12:3:16:93.75%:75:2.8282E-8:34:1:0:1:16 1/1:36:28:18:10:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:24:16:8:25:100%:99:3.101E-14:0:0:0:0:28 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:15 MTB_anc 208073 . G T . PASS AC=26;AF=0.087;AN=300;ANN=T|missense_variant|MODERATE|Rv0176_Rv0176|gene183|transcript|Transcript_gene183|Coding|1/1|c.622G>T|p.Val208Leu|622/969|622/969|208/322||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.208073G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.208073G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.208073G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:28 0/0:0:0:0:0:43:0%:82:1E0:46:43:15:28:44 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:25:0%:48:1E0:42:25:8:17:25 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:41 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:29 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:47:0%:89:1E0:42:47:19:28:49 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:7:16:23 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:47:0%:89:1E0:38:47:13:34:48 0/0:0:0:0:0:34:0%:62:1E0:46:34:10:24:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:45 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:37:1:0:1:39:2.56%:62:5E-1:43:38:23:15:39 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:56:0%:99:1E0:43:56:25:31:56 0/0:0:0:0:0:55:0%:99:1E0:45:55:29:26:55 0/0:0:0:0:0:49:0%:93:1E0:46:49:23:26:49 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:8:18:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:48 1/1:42:25:11:14:26:96.15%:99:5.4444E-14:37:1:1:0:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:35 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:45 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:47 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:44 0/0:0:0:0:0:21:0%:40:1E0:52:21:14:7:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:49:0%:93:1E0:42:49:18:31:49 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:35 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:41 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:47 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:50:0%:92:1E0:42:50:20:30:50 0/0:0:0:0:0:59:0%:99:1E0:44:59:26:33:60 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:44 0/0:0:0:0:0:13:0%:25:1E0:47:13:7:6:13 0/0:0:0:0:0:14:0%:25:1E0:44:14:4:10:14 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:10:25:35 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:43 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:36 0/0:0:0:0:0:53:0%:99:1E0:41:53:25:28:53 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:40 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:7:22:29 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:18:0%:32:1E0:46:18:3:15:18 0/0:0:0:0:0:49:0%:93:1E0:43:49:21:28:50 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:49 0/0:0:0:0:0:19:0%:37:1E0:44:19:13:6:19 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:20 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:44 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:38:25:8:17:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:9:21:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:12:25:37 0/0:0:0:0:0:20:0%:36:1E0:46:20:14:6:20 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:20:0%:36:1E0:40:20:5:15:20 0/0:30:1:0:1:36:2.78%:55:5E-1:44:35:16:19:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:17:29:46 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:54 0/0:0:0:0:0:54:0%:99:1E0:40:54:25:29:54 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 1/1:37:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:44 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:43 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:38 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:36 0/0:0:0:0:0:38:0%:70:1E0:38:38:13:25:41 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:38:31:11:20:31 0/0:0:0:0:0:46:0%:85:1E0:38:46:16:30:47 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:39 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:47 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:42 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:48:0%:89:1E0:44:48:18:30:49 0/0:0:0:0:0:58:0%:99:1E0:42:58:26:32:58 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 MTB_anc 208316 . A AT . PASS AC=261;AF=0.870;AN=300;ANN=AT|frameshift_variant|HIGH|Rv0176_Rv0176|gene183|transcript|Transcript_gene183|Coding|1/1|c.866dupT|p.Ser290fs|867/969|867/969|289/322||INFO_REALIGN_3_PRIME,AT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.208316_208317insT||||||,AT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.208316_208317insT||||||,AT|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.208316_208317insT||||||;LOF=(Rv0176_Rv0176|gene183|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:34:16:18:35:91.89%:99:5.6582E-18:43:3:1:2:37 0/1:47:32:14:18:37:86.49%:99:4.8717E-16:46:5:2:3:37 1/1:49:40:21:19:42:93.02%:99:2.287E-21:34:3:0:3:43 1/1:46:30:17:13:32:93.75%:99:3.0612E-16:37:2:0:2:32 0/1:48:17:5:12:20:85%:78:1.2848E-8:37:3:1:2:20 1/1:43:31:15:16:34:91.18%:99:2.7308E-16:43:3:2:1:34 0/1:46:20:9:11:24:83.33%:91:6.3493E-10:37:4:3:1:24 0/1:50:19:11:8:23:82.61%:86:2.1316E-9:42:4:2:2:23 1/1:45:30:12:18:32:93.75%:99:3.0612E-16:46:2:1:1:32 0/1:48:28:13:15:32:87.5%:99:1.2857E-14:52:3:0:3:32 1/1:48:36:18:18:40:90%:99:1.2627E-18:41:4:1:3:40 1/1:44:43:20:23:45:95.56%:99:1.0412E-23:37:2:1:1:45 0/1:45:15:5:10:16:88.24%:71:7.3277E-8:45:2:0:2:17 0/1:47:49:19:30:55:89.09%:99:5.6355E-25:35:6:3:3:55 0/1:46:19:10:9:24:79.17%:84:3.6826E-9:37:5:3:2:24 1/1:45:28:13:15:30:93.33%:99:4.194E-15:49:2:2:0:30 1/1:47:22:10:12:24:91.67%:99:1.0078E-11:35:2:0:2:24 1/1:47:17:9:8:18:94.44%:86:2.0936E-9:37:1:0:1:19 1/1:48:31:15:16:33:93.94%:99:8.2416E-17:49:2:1:1:33 1/1:49:26:13:13:27:96.3%:99:1.4382E-14:37:1:1:0:27 0/1:44:23:14:9:26:88.46%:99:7.3681E-12:36:3:2:1:26 0/1:43:40:19:21:45:85.11%:99:4.9559E-20:44:6:4:2:48 1/1:47:25:13:12:26:96.15%:99:5.4444E-14:37:1:0:1:26 1/1:49:25:14:11:26:96.15%:99:5.4444E-14:37:1:0:1:26 0/1:44:29:15:14:32:87.88%:99:9.1482E-15:37:4:1:3:33 0/1:47:24:16:8:27:88.89%:99:2.0853E-12:60:3:1:2:27 0/1:47:20:11:9:23:86.96%:95:3.1579E-10:43:3:1:2:23 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:26:16:10:28:92.86%:99:5.6872E-14:44:2:0:2:28 1/1:48:24:11:13:26:92.31%:99:7.6222E-13:38:2:1:1:26 1/1:45:20:11:9:21:95.24%:99:4.0873E-11:60:1:0:1:21 0/1:42:24:11:13:30:80%:99:1.647E-11:40:6:3:3:30 1/1:48:39:23:16:39:97.5%:99:3.8137E-22:38:1:0:1:40 1/1:43:31:17:14:34:91.18%:99:2.7308E-16:36:3:1:2:34 1/1:48:30:13:17:32:93.75%:99:3.0612E-16:46:2:1:1:32 1/1:43:31:8:23:32:93.94%:99:8.2416E-17:35:2:1:1:33 0/1:41:27:13:14:30:87.1%:99:1.125E-13:36:4:2:2:31 1/1:49:47:23:24:50:94%:99:5.0044E-26:48:2:1:1:50 1/1:46:48:24:24:47:100%:99:1.554E-28:0:0:0:0:48 1/1:47:38:19:19:41:92.68%:99:3.1178E-20:44:3:0:3:41 0/1:43:22:8:14:29:75.86%:95:2.7763E-10:39:7:4:3:29 0/1:47:34:22:12:38:89.47%:99:1.6239E-17:35:4:3:1:38 1/1:46:20:10:10:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:42:18:7:11:19:94.74%:92:5.6585E-10:38:1:0:1:19 0/1:49:23:16:7:26:88.46%:99:7.3681E-12:34:3:2:1:26 1/1:43:27:12:15:29:90%:99:4.6134E-14:50:3:3:0:30 1/1:49:18:10:8:20:90%:87:1.6758E-9:35:2:1:1:20 1/1:42:28:16:12:27:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:43:29:13:16:31:93.55%:99:1.1344E-15:49:2:1:1:31 1/1:48:29:16:13:31:93.55%:99:1.1344E-15:46:2:1:1:31 1/1:43:17:10:7:17:94.44%:86:2.0936E-9:34:1:1:0:18 1/1:47:43:22:21:44:97.73%:99:1.7144E-24:38:1:0:1:45 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:22:13:9:22:95.65%:99:2.9149E-12:37:1:0:1:23 0/1:39:16:7:9:18:88.89%:76:2.0936E-8:35:2:1:1:18 1/1:44:35:20:15:38:92.11%:99:1.5466E-18:44:3:3:0:38 1/1:44:24:12:12:25:92.31%:99:7.6222E-13:38:2:0:2:26 1/1:44:15:8:7:16:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:44:41:25:16:43:93.18%:99:6.1775E-22:33:3:2:1:44 1/1:52:24:9:15:26:92.31%:99:7.6222E-13:47:2:1:1:26 1/1:47:26:11:15:28:92.86%:99:5.6872E-14:33:2:0:2:28 1/1:45:37:18:19:40:92.5%:99:1.1479E-19:43:3:2:1:40 1/1:43:41:20:21:42:97.62%:99:2.5612E-23:37:1:0:1:42 1/1:48:18:6:12:19:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:44:38:16:22:42:90.48%:99:9.7197E-20:40:4:0:4:42 1/1:46:54:31:23:57:93.1%:99:9.0836E-29:37:4:2:2:59 1/1:48:24:13:11:26:92.31%:99:7.6222E-13:37:2:1:1:26 1/1:45:38:17:21:39:97.44%:99:1.4697E-21:37:1:1:0:39 0/1:53:13:3:10:15:86.67%:60:8.7675E-7:46:2:1:1:15 1/1:48:23:15:8:25:92%:99:2.7767E-12:49:2:0:2:25 1/1:52:32:16:16:33:96.97%:99:4.7095E-18:33:1:0:1:33 1/1:46:16:6:10:17:94.12%:81:7.7134E-9:49:1:0:1:17 1/1:48:17:6:11:16:100%:93:4.2852E-10:0:0:0:0:17 0/1:51:33:21:12:37:89.19%:99:5.7997E-17:43:4:1:3:37 0/1:46:31:18:13:35:88.57%:99:7.3316E-16:35:4:0:4:35 0/1:47:22:16:6:25:88%:99:2.5916E-11:44:3:1:2:25 1/1:46:31:20:11:33:93.94%:99:8.2416E-17:49:2:1:1:33 1/1:49:23:11:12:25:92%:99:2.7767E-12:33:2:2:0:25 1/1:42:22:8:14:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:45:23:9:14:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:46:21:7:14:22:91.3%:99:3.6437E-11:37:2:0:2:23 1/1:43:37:13:24:41:90.24%:99:3.5075E-19:42:4:4:0:42 1/1:42:30:14:16:31:96.77%:99:6.8754E-17:37:1:0:1:31 1/1:51:20:10:10:22:90.91%:98:1.3117E-10:48:2:1:1:22 0/1:39:20:11:9:28:71.43%:85:2.7631E-9:39:7:3:4:28 1/1:42:29:14:15:32:90.62%:99:3.5714E-15:43:3:0:3:32 0/1:44:23:13:10:27:82.14%:99:3.103E-11:35:5:1:4:28 0/1:47:21:13:8:24:87.5%:99:9.0704E-11:36:3:1:2:24 1/1:49:35:19:16:37:92.11%:99:1.5466E-18:37:3:1:2:38 1/1:46:34:18:16:34:97.14%:99:3.2089E-19:60:1:0:1:35 1/1:46:24:14:10:25:96%:99:2.0568E-13:38:1:0:1:25 0/1:56:13:6:7:15:86.67%:60:8.7675E-7:46:2:2:0:15 1/1:40:50:25:25:55:90.91%:99:5.5432E-26:36:5:4:1:55 1/1:49:32:18:14:33:96.97%:99:4.7095E-18:32:1:0:1:33 1/1:46:37:21:16:39:94.87%:99:3.0128E-20:37:2:1:1:39 1/1:45:24:11:13:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:42:25:12:13:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:16:13:30:90.62%:99:3.5714E-15:36:3:2:1:32 1/1:43:35:18:17:36:97.22%:99:8.3613E-20:38:1:0:1:36 1/1:45:24:11:13:26:92.31%:99:7.6222E-13:35:2:0:2:26 1/1:47:24:11:13:24:96%:99:2.0568E-13:38:1:0:1:25 1/1:46:27:9:18:30:90%:99:4.6134E-14:43:3:2:1:30 1/1:43:45:24:21:46:97.83%:99:1.1441E-25:60:1:1:0:46 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:14:10:4:15:93.33%:69:1.0315E-7:37:1:0:1:15 1/1:45:28:18:10:31:90.32%:99:1.2857E-14:43:3:1:2:31 1/1:45:32:19:13:33:96.97%:99:4.7095E-18:38:1:0:1:33 1/1:45:38:16:22:41:92.68%:99:3.1178E-20:36:3:0:3:41 1/1:43:30:11:19:32:93.75%:99:3.0612E-16:37:2:1:1:32 0/1:45:33:22:11:38:86.84%:99:1.3966E-16:35:5:1:4:38 1/1:44:30:16:14:33:90.91%:99:9.89E-16:37:3:2:1:33 1/1:49:32:18:14:32:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:44:23:14:9:25:92%:99:2.7767E-12:35:2:0:2:25 1/1:40:33:12:21:32:97.06%:99:1.2301E-18:38:1:0:1:34 0/1:41:32:15:17:36:86.49%:99:4.8717E-16:36:5:1:4:38 0/1:40:36:20:16:43:83.72%:99:1.5048E-17:35:7:6:1:43 1/1:40:25:13:12:27:92.59%:99:2.0853E-13:34:2:2:0:27 1/1:50:36:18:18:38:94.74%:99:1.1316E-19:38:2:0:2:38 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:49:23:26:52:92.45%:99:6.2975E-26:36:4:3:1:53 1/1:42:42:19:23:45:93.33%:99:1.6658E-22:43:3:2:1:45 0/1:42:27:15:12:30:87.1%:99:1.125E-13:41:4:2:2:31 0/1:47:19:7:12:22:82.61%:86:2.1316E-9:35:4:1:3:24 1/1:38:38:20:18:41:92.68%:99:3.1178E-20:37:3:1:2:41 1/1:43:35:19:16:37:94.59%:99:4.2437E-19:49:2:1:1:37 1/1:40:38:21:17:42:90.48%:99:9.7197E-20:36:4:2:2:42 1/1:38:36:25:11:36:94.74%:99:1.1316E-19:46:2:1:1:38 1/1:41:47:25:22:49:94%:99:2.3219E-25:37:3:2:1:51 1/1:45:42:18:24:46:91.3%:99:5.6062E-22:35:4:2:2:46 0/1:43:31:14:17:34:88.57%:99:7.3316E-16:36:4:2:2:35 0/1:45:23:10:13:27:82.14%:99:3.103E-11:37:5:2:3:29 1/1:43:33:22:11:36:91.67%:99:2.0653E-17:36:3:1:2:36 1/1:43:36:17:19:36:97.3%:99:2.1762E-20:32:1:0:1:37 0/1:40:30:20:10:36:83.33%:99:2.5943E-15:35:4:0:4:36 1/1:38:35:16:19:33:97.22%:99:8.3613E-20:38:1:0:1:36 1/1:42:25:8:17:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:39:53:24:29:53:96.36%:99:1.6199E-29:35:2:1:1:55 0/1:45:34:14:20:40:82.93%:99:8.7127E-17:37:6:0:6:41 0/1:44:34:19:15:37:89.47%:99:1.6239E-17:37:4:2:2:38 0/1:43:47:29:18:53:88.68%:99:7.1833E-24:48:6:2:4:53 1/1:43:31:17:14:32:96.88%:99:1.8007E-17:33:1:1:0:32 1/1:42:28:16:12:29:93.33%:99:4.194E-15:35:2:1:1:30 1/1:42:35:21:14:37:94.59%:99:4.2437E-19:35:2:2:0:37 1/1:43:37:20:17:41:90.24%:99:3.5075E-19:35:4:2:2:41 1/1:39:27:14:13:29:90%:99:4.6134E-14:36:3:3:0:30 1/1:46:28:14:14:28:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:46:41:24:17:43:93.18%:99:6.1775E-22:37:3:1:2:44 1/1:47:31:21:10:33:93.94%:99:8.2416E-17:37:2:0:2:33 1/1:41:48:20:28:50:94.12%:99:6.2071E-26:43:3:3:0:51 0/1:40:20:13:7:22:86.96%:95:3.1579E-10:34:3:1:2:23 MTB_anc 208320 . GC G . PASS AC=300;AF=1.00;AN=300;ANN=G|frameshift_variant|HIGH|Rv0176_Rv0176|gene183|transcript|Transcript_gene183|Coding|1/1|c.870delC|p.Ser290fs|870/969|870/969|290/322||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.208321delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.208321delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.208321delC||||||;HET=0;HOM=1;LOF=(Rv0176_Rv0176|gene183|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:30:17:13:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:31:15:16:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:36:18:18:36:97.3%:99:2.1762E-20:38:1:1:0:37 1/1:45:42:20:22:43:97.67%:99:6.6289E-24:34:1:0:1:43 1/1:45:15:5:10:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:49:19:30:47:100%:99:3.925E-29:0:0:0:0:49 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:22:10:12:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:17:9:8:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:42:20:22:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:38:19:19:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:22:8:14:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:33:21:12:34:97.06%:99:1.2301E-18:34:1:1:0:34 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:17:10:7:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:30:16:14:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:12:12:23:100%:99:3.101E-14:0:0:0:0:24 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:40:25:15:40:97.56%:99:9.8874E-23:33:1:0:1:41 1/1:52:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:53:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:23:15:8:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:51:32:16:16:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:17:6:11:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:52:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:20:10:31:96.77%:99:6.8754E-17:32:1:0:1:31 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:29:14:15:30:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:14:15:26:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:13:10:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:31:16:15:32:96.88%:99:1.8007E-17:60:1:1:0:33 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:56:13:6:7:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:23:10:13:24:95.83%:99:7.7525E-13:35:1:1:0:24 1/1:45:24:12:12:25:96%:99:2.0568E-13:32:1:0:1:25 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:11:13:23:100%:99:3.101E-14:0:0:0:0:24 1/1:48:23:10:13:24:95.83%:99:7.7525E-13:24:1:1:0:24 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:26:17:9:27:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:45:32:19:13:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:15:22:38:97.37%:99:5.6582E-21:26:1:1:0:38 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:22:11:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:15:17:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:20:16:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:26:14:12:27:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:26:15:11:24:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:19:16:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:35:24:11:36:97.22%:99:8.3613E-20:33:1:1:0:36 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:41:17:24:42:95.35%:99:2.5612E-23:26:1:1:0:43 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:21:11:32:96.97%:99:4.7095E-18:24:1:1:0:33 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:35:16:19:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:53:24:29:52:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:19:14:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:43:47:29:18:48:97.92%:99:6.1512E-28:0:0:0:0:48 1/1:43:31:17:14:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:37:20:17:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:13:14:28:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:46:19:27:48:95.83%:99:1.9036E-25:34:2:1:1:48 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 MTB_anc 208322 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0176_Rv0176|gene183|transcript|Transcript_gene183|Coding|1/1|c.871G>T|p.Ala291Ser|871/969|871/969|291/322||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.208322G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.208322G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.208322G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:52:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:53:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:52:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:56:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:41:18:23:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 MTB_anc 214494 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv0183_Rv0183|gene190|transcript|Transcript_gene190|Coding|1/1|c.407C>T|p.Ala136Val|407/840|407/840|136/279||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.214494C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.214494C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:43:59:35:24:60 0/0:0:0:0:0:15:0%:29:1E0:45:15:11:4:15 0/0:0:0:0:0:48:0%:89:1E0:46:48:27:21:49 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:22:9:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:44 0/0:0:0:0:0:44:0%:81:1E0:43:44:28:16:44 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:41 0/0:0:0:0:0:46:0%:85:1E0:43:46:31:15:47 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:62:0%:99:1E0:41:62:37:25:63 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:25 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:44:0%:81:1E0:40:44:33:11:44 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:50 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:38 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:49:35:21:14:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:21:8:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:33 0/0:0:0:0:0:36:0%:66:1E0:45:36:24:12:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:21:8:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:85:0%:99:1E0:45:85:46:39:86 0/0:0:0:0:0:48:0%:89:1E0:45:48:32:16:51 0/0:0:0:0:0:64:0%:99:1E0:41:64:37:27:65 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:37 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:24:8:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:47:0%:89:1E0:42:47:30:17:48 0/0:60:1:0:1:35:2.86%:55:5E-1:42:34:21:13:36 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:49 0/0:0:0:0:0:51:0%:97:1E0:45:51:25:26:53 0/0:0:0:0:0:48:0%:89:1E0:45:48:30:18:48 0/0:36:1:1:0:35:2.86%:55:5E-1:44:34:20:14:35 0/0:0:0:0:0:44:0%:81:1E0:40:44:29:15:45 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:53:0%:99:1E0:42:53:33:20:53 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:45:0%:85:1E0:45:45:29:16:46 0/0:0:0:0:0:53:0%:99:1E0:44:53:23:30:54 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:36 0/0:0:0:0:0:49:0%:93:1E0:41:49:29:20:50 0/0:0:0:0:0:56:0%:99:1E0:44:56:30:26:57 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:44:0%:81:1E0:47:44:29:15:45 0/0:0:0:0:0:50:0%:92:1E0:45:50:26:24:50 0/0:0:0:0:0:32:0%:59:1E0:40:32:22:10:32 0/0:0:0:0:0:42:0%:77:1E0:46:42:25:17:43 0/0:0:0:0:0:22:0%:40:1E0:49:22:8:14:23 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:18 0/0:51:1:0:1:37:2.7%:59:5E-1:45:36:19:17:37 0/0:0:0:0:0:23:0%:44:1E0:48:23:14:9:24 0/0:60:1:0:1:22:4.55%:31:5E-1:47:21:8:13:22 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:50:0%:92:1E0:43:50:29:21:51 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:44:0%:81:1E0:42:44:31:13:44 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:41:0%:78:1E0:44:41:30:11:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:38 0/0:60:1:1:0:34:2.94%:51:5E-1:41:33:19:14:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:42:0%:77:1E0:43:42:30:12:43 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:49:1:0:1:23:4.35%:34:5E-1:47:22:14:8:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:41:0%:78:1E0:50:41:23:18:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:30 0/0:0:0:0:0:47:0%:89:1E0:41:47:30:17:47 0/0:0:0:0:0:45:0%:85:1E0:43:45:32:13:45 0/0:0:0:0:0:62:0%:99:1E0:43:62:36:26:62 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:39 0/0:0:0:0:0:47:0%:89:1E0:45:47:31:16:48 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:41 0/0:0:0:0:0:40:0%:74:1E0:46:40:25:15:41 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:47 0/0:0:0:0:0:43:0%:82:1E0:44:43:29:14:44 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:24:10:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:31 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:29:8:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:20:6:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:21:8:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:41 0/0:0:0:0:0:51:0%:97:1E0:40:51:26:25:51 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:50:0%:92:1E0:43:50:32:18:54 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:55:0%:99:1E0:43:55:31:24:55 0/0:0:0:0:0:64:0%:99:1E0:41:64:35:29:65 0/0:34:1:1:0:40:2.5%:62:5E-1:45:39:20:19:41 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:35 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:48 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:43 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:30 0/0:0:0:0:0:60:0%:99:1E0:39:60:39:21:62 0/0:0:0:0:0:53:0%:99:1E0:40:53:30:23:53 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:41 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:28:16:45 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:36:0%:66:1E0:41:36:24:12:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:21:10:31 0/0:0:0:0:0:62:0%:99:1E0:39:62:38:24:62 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:46:0%:85:1E0:39:46:26:20:46 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:42 0/0:0:0:0:0:57:0%:99:1E0:41:57:33:24:58 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:35:0%:67:1E0:40:35:25:10:35 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:39 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:49 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:54:0%:99:1E0:43:54:33:21:54 0/0:0:0:0:0:38:0%:70:1E0:44:38:26:12:38 0/0:0:0:0:0:51:0%:97:1E0:39:51:27:24:51 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:49 MTB_anc 215400 . C A . PASS AC=14;AF=0.047;AN=300;ANN=A|synonymous_variant|LOW|Rv0184_Rv0184|gene191|transcript|Transcript_gene191|Coding|1/1|c.432C>A|p.Ile144Ile|432/750|432/750|144/249||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.215400C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.215400C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:55 0/0:38:1:1:0:19:5.26%:28:5E-1:54:18:11:7:19 0/0:0:0:0:0:50:0%:92:1E0:43:50:21:29:50 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:37:0%:70:1E0:46:37:13:24:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:18:10:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:35 0/0:0:0:0:0:11:0%:22:1E0:43:11:4:7:11 0/0:38:1:0:1:42:2.38%:66:5E-1:45:41:16:25:42 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:29 0/0:0:0:0:0:16:0%:29:1E0:47:16:5:11:16 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:30 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:45 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:31:0%:59:1E0:44:31:10:21:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:51:24:6:18:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:57:0%:99:1E0:44:57:29:28:58 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:35:1:0:1:50:2%:80:5E-1:45:49:25:24:51 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 0/0:0:0:0:0:46:0%:85:1E0:42:46:19:27:46 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:37 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:46 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:14:0%:25:1E0:53:14:4:10:15 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:48 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:35 0/0:0:0:0:0:52:0%:96:1E0:45:52:23:29:53 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:49:0%:93:1E0:43:49:26:23:50 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:37 0/0:0:0:0:0:24:0%:44:1E0:49:24:7:17:24 0/0:0:0:0:0:18:0%:32:1E0:54:18:6:12:18 0/0:0:0:0:0:49:0%:93:1E0:50:49:25:24:49 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:42 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:29 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:35 0/0:0:0:0:0:63:0%:99:1E0:42:63:35:28:64 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:19:0%:37:1E0:46:19:5:14:19 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:44 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:38 0/0:0:0:0:0:35:0%:67:1E0:46:35:11:24:36 0/0:0:0:0:0:19:0%:37:1E0:49:19:7:12:19 0/0:0:0:0:0:42:0%:77:1E0:48:42:19:23:42 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:31 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:54:0%:99:1E0:40:54:23:31:55 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:24 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:21 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:24 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:41 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:34 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:41 0/0:0:0:0:0:19:0%:37:1E0:47:19:13:6:21 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:51 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:18:9:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:47:0%:89:1E0:38:47:23:24:48 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:48:0%:89:1E0:38:48:26:22:48 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:23:11:36 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:51 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:46:0%:85:1E0:42:46:18:28:46 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:28 0/0:0:0:0:0:58:0%:99:1E0:38:58:29:29:58 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:24:15:39 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:53 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 MTB_anc 217201 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|bglS_Rv0186|gene193|transcript|Transcript_gene193|Coding|1/1|c.933C>T|p.Asn311Asn|933/2076|933/2076|311/691||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.217201C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.217201C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:52 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:26:11:15:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:28 1/1:43:25:12:13:26:96.15%:99:5.4444E-14:31:1:0:1:27 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:27:18:9:28:96.43%:99:3.7915E-15:39:1:0:1:30 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:61 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:37:21:16:38:97.37%:99:5.6582E-21:39:1:0:1:40 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:41:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:67 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:37:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:36:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:37:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:36:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:36:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:46:25:21:47:97.87%:99:2.4343E-27:0:0:0:0:48 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:37:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:48:30:18:48:100%:99:1.554E-28:0:0:0:0:52 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 220050 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|ilvD_Rv0189c|gene197|transcript|Transcript_gene197|Coding|1/1|c.1674G>A|p.Leu558Leu|1674/1728|1674/1728|558/575||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.220050C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.220050C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:67:40:27:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:16:5:11:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:53:26:27:54:98.15%:99:1.5943E-31:0:0:0:0:54 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:39:20:19:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:43:27:16:44:97.73%:99:1.7144E-24:60:1:1:0:44 1/1:39:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:45:29:16:46:97.83%:99:1.1441E-25:37:1:0:1:47 1/1:44:72:37:35:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 222486 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv0191_Rv0191|gene199|transcript|Transcript_gene199|Coding|1/1|c.198C>T|p.Ala66Ala|198/1242|198/1242|66/413||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.222486C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.222486C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:55:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:58:29:29:59:98.31%:99:2.4634E-33:44:1:0:1:60 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:60:41:19:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:40:16:24:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:44:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:53:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:73:35:38:73:100%:99:1.7006E-43:0:0:0:0:76 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:33:17:16:34:97.06%:99:1.2301E-18:38:1:0:1:34 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:39:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:66 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 223752 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv0192_Rv0192|gene200|transcript|Transcript_gene200|Coding|1/1|c.189G>C|p.Gly63Gly|189/1101|189/1101|63/366||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.223752G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|beta-lactams|||n.223752G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.223752G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.223752G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:48:33:15:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:37:31:6:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:37:29:8:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:18:8:10:19:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:38:26:12:39:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:42:29:13:43:97.67%:99:6.6289E-24:38:1:0:1:43 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:22:16:6:23:95.65%:99:2.9149E-12:38:1:1:0:23 1/1:45:24:13:11:25:96%:99:2.0568E-13:37:1:1:0:25 1/1:38:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:26:14:12:27:96.3%:99:1.4382E-14:60:1:0:1:28 1/1:37:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:24:15:9:25:96%:99:2.0568E-13:32:1:1:0:26 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:37:31:21:10:32:96.88%:99:1.8007E-17:37:1:1:0:32 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:36:28:8:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:35:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:35:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:36:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:35:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:34:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:33:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:39:31:8:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:36:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 MTB_anc 225668 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0193c_Rv0193c|gene201|transcript|Transcript_gene201|Coding|1/1|c.904A>G|p.Ser302Gly|904/1848|904/1848|302/615||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.225668T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.225668T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:53:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:41:26:15:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:49:61:36:25:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:66:38:28:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:36:22:14:37:97.3%:99:2.1762E-20:29:1:0:1:37 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:63:32:31:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:52:30:22:53:98.11%:99:8.609E-30:37:1:1:0:54 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:55:26:29:56:98.21%:99:1.0149E-32:0:0:0:0:56 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:55:37:18:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 233358 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0197_Rv0197|gene205|transcript|Transcript_gene205|Coding|1/1|c.1128C>A|p.Val376Val|1128/2289|1128/2289|376/762||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.233358C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.233358C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:50:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:50:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:32:18:14:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:14:9:24:100%:99:1.2146E-13:0:0:0:0:26 1/1:47:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:49:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:56:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:56:29:27:57:100%:99:2.5602E-33:0:0:0:0:59 1/1:43:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:63:29:34:63:100%:99:1.657E-37:0:0:0:0:65 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:33:14:19:34:97.06%:99:1.2301E-18:32:1:1:0:34 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 233364 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0197_Rv0197|gene205|transcript|Transcript_gene205|Coding|1/1|c.1134C>G|p.Ser378Arg|1134/2289|1134/2289|378/762||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.233364C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.233364C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:48:18:30:50:96%:99:1.554E-28:0:0:0:0:50 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:14:12:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:49:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:31:14:17:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:37:18:19:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:49:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:37:17:20:38:97.37%:99:5.7269E-22:0:0:0:0:39 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:50:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:56:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:18:16:35:97.14%:99:3.5146E-20:0:0:0:0:36 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:24:12:12:25:96%:99:2.0568E-13:38:1:0:1:26 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:43:25:18:44:97.73%:99:1.5066E-25:0:0:0:0:45 1/1:50:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:24:12:12:25:96%:99:3.101E-14:0:0:0:0:25 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:43:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:40:63:29:34:63:100%:99:1.657E-37:0:0:0:0:63 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:57:27:30:58:98.28%:99:6.4572E-34:0:0:0:0:58 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:32:21:11:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:39:39:19:20:40:97.5%:99:3.6742E-23:0:0:0:0:43 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 234494 . T TGC . PASS AC=299;AF=0.997;AN=300;ANN=TGC|frameshift_variant|HIGH|Rv0197_Rv0197|gene205|transcript|Transcript_gene205|Coding|1/1|c.2265_2266insCG|p.Ser756fs|2266/2289|2266/2289|756/762||INFO_REALIGN_3_PRIME,TGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.234494_234495insGC||||||,TGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.234494_234495insGC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:50:24:26:49:100%:99:9.9117E-30:0:0:0:0:50 1/1:55:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:49:17:32:51:96.08%:99:3.4484E-27:33:2:1:1:51 1/1:45:17:6:11:17:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:48:25:8:17:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:46:28:13:15:29:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:52:23:10:13:24:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:43:22:15:7:23:95.65%:99:2.9149E-12:33:1:1:0:23 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:30:11:19:31:96.77%:99:6.8754E-17:34:1:0:1:32 1/1:53:16:9:7:17:94.12%:81:7.7134E-9:36:1:1:0:17 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:56:29:27:60:93.33%:99:6.5764E-30:33:4:1:3:60 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:24:12:12:25:96%:99:2.0568E-13:38:1:1:0:25 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:48:27:21:47:100%:99:1.554E-28:0:0:0:0:48 1/1:53:19:6:13:20:95%:98:1.5234E-10:34:1:0:1:20 1/1:44:38:15:23:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:10:13:25:92%:99:2.7767E-12:33:2:2:0:25 1/1:47:21:11:10:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:47:20:15:5:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:45:25:15:10:29:86.21%:99:1.3609E-12:33:4:2:2:29 1/1:48:34:14:20:36:94.44%:99:1.5887E-18:34:2:1:1:36 1/1:45:23:7:16:24:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:40:17:23:41:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:46:38:17:21:39:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:48:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:44:18:26:45:95.65%:99:2.7459E-24:33:2:1:1:46 1/1:45:47:26:21:50:94%:99:2.3219E-25:42:3:1:2:50 1/1:43:28:12:16:30:93.33%:99:4.194E-15:35:2:1:1:30 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:16:9:26:96.15%:99:5.4444E-14:34:1:1:0:26 1/1:42:30:9:21:31:96.77%:99:6.8754E-17:37:1:0:1:31 1/1:42:49:29:20:48:100%:99:3.925E-29:0:0:0:0:49 1/1:43:32:19:13:33:94.12%:99:2.2142E-17:35:2:1:1:34 1/1:43:26:11:15:26:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:44:28:11:17:30:96.55%:99:9.9776E-16:60:1:0:1:30 1/1:44:40:20:20:41:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:45:29:13:16:29:96.67%:99:2.6212E-16:35:1:1:0:30 1/1:46:20:5:15:20:95.24%:99:4.0873E-11:34:1:1:0:21 1/1:41:38:21:17:38:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:47:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:30:9:21:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:18:6:12:20:90%:87:1.6758E-9:46:2:1:1:20 1/1:41:43:16:27:41:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:38:19:19:38:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:25:12:13:27:92.59%:99:2.0853E-13:33:2:2:0:27 1/1:43:40:16:24:41:97.56%:99:9.8874E-23:34:1:1:0:41 1/1:44:40:14:26:40:95.24%:99:5.6346E-22:32:2:1:1:42 1/1:49:27:13:14:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:47:37:13:24:38:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:46:58:29:29:62:93.55%:99:4.7391E-31:34:4:1:3:62 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:32:17:15:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:41:17:9:8:17:94.44%:86:2.0936E-9:35:1:0:1:18 1/1:50:20:10:10:21:95.24%:99:4.0873E-11:33:1:1:0:21 1/1:42:40:21:19:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:18:20:39:97.44%:99:1.4697E-21:32:1:1:0:39 1/1:43:24:12:12:25:96%:99:2.0568E-13:34:1:1:0:25 1/1:41:27:13:14:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:44:24:10:14:24:96%:99:2.0568E-13:34:1:0:1:26 1/1:43:30:10:20:31:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:12:13:24:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:24:8:16:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:23:11:12:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:47:21:26:49:95.92%:99:5.0044E-26:46:2:1:1:49 1/1:46:21:7:14:22:95.45%:99:1.0931E-11:32:1:1:0:22 1/1:42:57:31:26:58:98.28%:99:9.6072E-33:35:1:0:1:58 1/1:44:31:17:14:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:44:26:10:16:26:92.86%:99:5.6872E-14:32:2:0:2:28 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:18:11:31:93.55%:99:1.1344E-15:32:2:0:2:31 1/1:43:26:11:15:27:96.3%:99:1.4382E-14:29:1:0:1:27 1/1:41:28:12:16:29:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:44:27:10:17:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:45:37:18:19:38:97.37%:99:5.6582E-21:35:1:0:1:38 1/1:47:29:15:14:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:16:16:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:43:25:8:17:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:12:19:33:93.94%:99:8.2416E-17:46:2:1:1:33 1/1:45:27:11:16:29:93.1%:99:1.5465E-14:33:2:0:2:29 1/1:38:16:10:6:17:94.12%:81:7.7134E-9:32:1:0:1:17 1/1:45:30:11:19:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:39:36:18:18:37:94.74%:99:1.1316E-19:32:2:0:2:38 1/1:39:44:16:28:46:95.65%:99:2.7459E-24:35:2:1:1:46 1/1:41:32:15:17:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:40:42:17:25:40:97.67%:99:6.6289E-24:34:1:0:1:43 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:43:26:17:44:95.56%:99:1.7144E-24:34:1:0:1:45 1/1:42:45:24:21:45:97.83%:99:1.1441E-25:37:1:1:0:46 1/1:45:14:7:7:14:93.33%:69:1.0315E-7:34:1:0:1:15 1/1:38:19:10:9:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:53:30:23:55:96.36%:99:1.6199E-29:32:2:0:2:55 1/1:40:45:19:26:45:97.83%:99:1.1441E-25:32:1:0:1:46 1/1:41:49:23:26:50:98%:99:5.0549E-28:33:1:0:1:50 1/1:38:49:18:31:47:98%:99:5.0549E-28:34:1:0:1:50 1/1:40:56:27:29:55:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:40:14:26:43:93.02%:99:2.287E-21:33:3:0:3:43 1/1:40:45:23:22:43:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:34:14:20:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:45:21:24:43:97.83%:99:1.1441E-25:30:1:1:0:46 1/1:40:37:18:19:35:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:36:17:19:37:97.3%:99:2.1762E-20:35:1:1:0:37 1/1:38:22:11:11:22:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:41:28:15:13:29:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:37:52:26:26:50:98.11%:99:8.609E-30:74:1:1:0:53 1/1:42:47:24:23:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:37:14:23:40:92.5%:99:3.0128E-20:33:2:0:2:40 1/1:43:42:16:26:44:95.45%:99:3.9431E-23:46:2:1:1:44 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:21:5:16:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:9:20:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:44:29:19:10:31:93.55%:99:1.1344E-15:33:2:1:1:31 1/1:43:44:30:14:44:97.78%:99:4.4304E-25:33:1:0:1:45 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:36:21:15:35:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:50:25:25:49:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:42:19:23:43:97.67%:99:6.6289E-24:34:1:0:1:43 1/1:42:35:15:20:35:97.22%:99:8.3613E-20:33:1:0:1:36 MTB_anc 238110 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0201c_Rv0201c|gene209|transcript|Transcript_gene209|Coding|1/1|c.286G>A|p.Ala96Thr|286/504|286/504|96/167||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.238110C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.238110C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:56:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:18:10:8:19:94.74%:92:5.6585E-10:39:1:1:0:20 1/1:41:28:14:14:29:96.55%:99:9.9776E-16:39:1:1:0:29 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:50:34:16:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:24:8:16:25:96%:99:2.0568E-13:37:1:1:0:26 1/1:46:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:61:33:28:61:100%:99:2.609E-36:0:0:0:0:63 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:27:18:9:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:48:32:16:48:100%:99:1.554E-28:0:0:0:0:51 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:25:5:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:37:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 1/1:38:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:49:30:19:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:57:34:23:58:98.28%:99:9.6072E-33:60:1:0:1:60 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 238852 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|mmpL11_Rv0202c|gene210|transcript|Transcript_gene210|Coding|1/1|c.2441T>C|p.Val814Ala|2441/2901|2441/2901|814/966||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.238852A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.238852A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:60:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:39:19:20:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:40:17:23:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:70:39:31:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:27:17:10:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:43:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:38:16:22:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:63:24:39:64:98.44%:99:2.7139E-36:60:1:1:0:64 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:51:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:31:10:21:32:96.88%:99:1.8007E-17:60:1:0:1:33 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:18:10:8:19:94.74%:92:5.6585E-10:38:1:0:1:19 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:50:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:15 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:37:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:48:24:24:49:97.96%:99:1.9625E-27:36:1:0:1:50 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 243598 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0205_Rv0205|gene213|transcript|Transcript_gene213|Coding|1/1|c.215G>A|p.Arg72His|215/1104|215/1104|72/367||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.243598G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.243598G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:46:23:6:17:24:95.83%:99:7.7525E-13:38:1:0:1:25 1/1:39:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:46:13:33:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:36:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:49:16:33:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:48:15:33:48:100%:99:1.554E-28:0:0:0:0:50 1/1:37:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:15:8:7:16:93.75%:75:2.8282E-8:37:1:0:1:16 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:46:13:33:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:48:14:34:48:100%:99:1.554E-28:0:0:0:0:50 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:24:5:19:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:38:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:39 1/1:36:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:37:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:36:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:47:13:34:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 249522 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0209_Rv0209|gene217|transcript|Transcript_gene217|Coding|1/1|c.485C>T|p.Ala162Val|485/1086|485/1086|162/361||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.249522C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.249522C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:55:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:49:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:35:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:37:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 MTB_anc 251575 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0210_Rv0210|gene218|transcript|Transcript_gene218|Coding|1/1|c.1456A>G|p.Thr486Ala|1456/1479|1456/1479|486/492||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.251575A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.251575A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:42:8:34:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:26:9:17:27:96.3%:99:1.4382E-14:26:1:0:1:27 1/1:37:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:31:8:23:32:96.88%:99:1.8007E-17:37:1:0:1:32 1/1:40:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:37:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:40:10:30:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:38:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:44:21:23:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:20:8:12:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:29:12:17:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:24:13:11:25:96%:99:2.0568E-13:39:1:1:0:25 1/1:36:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:39:9:30:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:35:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:25:4:21:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:37:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:34:7:27:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:35:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:29:11:18:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:35:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:35:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:36:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:35:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:35:24:2:22:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:37:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 251669 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0210_Rv0210-pckA_Rv0211|gene218-gene219|intergenic_region|gene218-gene219|||n.251669C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:40:14:26:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:58:20:38:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:20:8:12:21:95.24%:99:4.0873E-11:60:1:1:0:22 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:38:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:11:17:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 257808 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.257808G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.257808G>C||||||,C|intragenic_variant|MODIFIER|Rv0215c_Rv0215c|gene223|gene_variant|gene223|||n.257808G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:46:37:12:25:37 0/0:0:0:0:0:19:0%:37:1E0:50:19:7:12:19 0/0:0:0:0:0:56:0%:99:1E0:44:56:19:37:57 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:27 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:48:40:14:26:41 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:33 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:49 0/0:0:0:0:0:12:0%:21:1E0:46:12:6:6:12 0/0:0:0:0:0:54:0%:99:1E0:41:54:22:32:57 0/0:0:0:0:0:18:0%:32:1E0:44:18:5:13:20 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:25 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:22 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:21 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:22 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:23 0/0:0:0:0:0:62:0%:99:1E0:43:62:28:34:63 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:32:0%:59:1E0:49:32:9:23:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:6:17:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:10:25:35 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:18 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:48 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:39 0/0:0:0:0:0:58:0%:99:1E0:46:58:32:26:58 0/0:0:0:0:0:43:0%:82:1E0:44:43:15:28:43 0/0:0:0:0:0:44:0%:81:1E0:46:44:18:26:45 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:11:24:36 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:32:0%:59:1E0:46:32:10:22:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:15:0%:29:1E0:51:15:10:5:16 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:23 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:47 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:28 0/0:0:0:0:0:56:0%:99:1E0:44:56:25:31:57 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:25 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:50 0/0:0:0:0:0:50:0%:92:1E0:45:50:24:26:53 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:39:1:1:0:28:3.57%:41:5E-1:45:27:13:14:30 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:15 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:37 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:25 0/0:0:0:0:0:17:0%:33:1E0:48:17:6:11:18 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:36 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:48:0%:89:1E0:46:48:16:32:48 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:43:0%:82:1E0:42:43:13:30:44 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:10:23:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:51:0%:97:1E0:45:51:21:30:52 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:20 0/0:0:0:0:0:40:0%:74:1E0:39:40:17:23:41 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:32 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:16:0%:29:1E0:43:16:5:11:16 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:41 0/0:0:0:0:0:34:0%:62:1E0:38:34:11:23:39 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:23 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:37 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:25 0/0:0:0:0:0:44:0%:81:1E0:42:44:11:33:44 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:0:0:0:0:23:0%:44:1E0:44:23:6:17:24 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:28 0/0:0:0:0:0:39:0%:74:1E0:47:39:13:26:41 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:44 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:63:0%:99:1E0:44:63:26:37:64 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:42 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:40:0%:74:1E0:39:40:15:25:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:42 0/0:0:0:0:0:53:0%:99:1E0:41:53:20:33:55 0/0:0:0:0:0:46:0%:85:1E0:39:46:22:24:50 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:46 0/0:0:0:0:0:34:0%:62:1E0:38:34:11:23:35 0/0:0:0:0:0:45:0%:85:1E0:39:45:21:24:47 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:50 0/0:0:0:0:0:40:0%:74:1E0:44:40:13:27:42 0/0:0:0:0:0:56:0%:99:1E0:38:56:23:33:59 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:38 0/0:0:0:0:0:38:0%:70:1E0:46:38:25:13:40 0/0:0:0:0:0:59:0%:99:1E0:39:59:20:39:59 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:37 0/0:0:0:0:0:49:0%:93:1E0:39:49:23:26:49 0/0:0:0:0:0:34:0%:62:1E0:43:34:10:24:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:42 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:43 0/0:0:0:0:0:51:0%:97:1E0:43:51:18:33:52 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 MTB_anc 258860 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|intergenic_region|MODIFIER|Rv0215c_Rv0215c-Rv0216_Rv0216|gene223-gene224|intergenic_region|gene223-gene224|||n.258860T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:19:0%:37:1E0:52:19:8:11:19 0/0:0:0:0:0:62:0%:99:1E0:46:62:36:26:63 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:35 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:50:38:22:16:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:42 0/0:0:0:0:0:29:0%:55:1E0:52:29:9:20:29 0/0:0:0:0:0:54:0%:99:1E0:46:54:29:25:56 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:21 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:5:19:26 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:50 0/0:0:0:0:0:42:0%:77:1E0:46:42:27:15:43 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:40 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:44 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:23:0%:44:1E0:52:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:29 0/0:0:0:0:0:44:0%:81:1E0:51:44:22:22:44 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:37:0%:70:1E0:49:37:17:20:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:65:0%:99:1E0:50:65:32:33:67 0/0:0:0:0:0:57:0%:99:1E0:45:57:31:26:58 0/0:0:0:0:0:51:0%:97:1E0:47:51:33:18:53 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:32 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:46 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:36 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:25:0%:48:1E0:50:25:17:8:26 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:44 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:28 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:47 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:42:0%:77:1E0:50:42:17:25:43 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:51 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:21 0/0:0:0:0:0:36:0%:66:1E0:49:36:21:15:38 0/0:0:0:0:0:55:0%:99:1E0:45:55:27:28:55 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:44:0%:81:1E0:46:44:19:25:44 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:22 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:44 0/0:0:0:0:0:39:0%:74:1E0:52:39:20:19:39 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:16 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:46:0%:85:1E0:47:46:26:20:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:35:0%:67:1E0:50:35:21:14:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:50:37:17:20:37 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:61:0%:99:1E0:44:61:33:28:63 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:55:0%:99:1E0:44:55:26:29:55 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:40 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:32 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:32 0/0:0:0:0:0:48:0%:89:1E0:49:48:21:27:49 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:44:0%:81:1E0:43:44:30:14:45 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:55 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:44 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:65:0%:99:1E0:44:65:34:31:65 0/0:0:0:0:0:64:0%:99:1E0:44:64:28:36:67 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:53 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:38 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:59 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:35 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:46 0/0:0:0:0:0:51:0%:97:1E0:41:51:30:21:54 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:15:28:43 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:43 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:41 0/0:0:0:0:0:49:0%:93:1E0:40:49:23:26:49 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:41 0/0:0:0:0:0:61:0%:99:1E0:40:61:32:29:63 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:46 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:35 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:47 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:49 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:42 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:17 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:49 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:50 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:42 MTB_anc 260282 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|lipW_Rv0217c|gene225|transcript|Transcript_gene225|Coding|1/1|c.550A>C|p.Thr184Pro|550/909|550/909|184/302||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.260282T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.260282T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:18:14:33:96.97%:99:5.4567E-19:0:0:0:0:35 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:41:19:22:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:35:18:17:36:97.22%:99:8.3613E-20:38:1:1:0:37 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:39:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:38:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:11:19:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:37:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:36:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:35:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:36:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:37:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:35:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:36:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:49:30:19:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 MTB_anc 271291 . C G . PASS AC=68;AF=0.227;AN=300;ANN=G|missense_variant|MODERATE|Rv0226c_Rv0226c|gene234|transcript|Transcript_gene234|Coding|1/1|c.274G>C|p.Ala92Pro|274/1731|274/1731|92/576||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.271291C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.271291C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:44:45:28:17:45 0/0:0:0:0:0:14:0%:25:1E0:51:14:7:7:15 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:49 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:43 0/0:0:0:0:0:16:0%:29:1E0:52:16:8:8:16 0/0:0:0:0:0:38:0%:70:1E0:46:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:29 0/0:34:1:1:0:33:3.03%:52:5E-1:45:32:14:18:33 0/0:0:0:0:0:14:0%:25:1E0:47:14:8:6:14 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 1/1:48:19:9:10:20:95%:98:1.5234E-10:38:1:0:1:20 0/0:0:0:0:0:23:0%:44:1E0:51:23:13:10:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:41 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:52 0/0:0:0:0:0:38:0%:70:1E0:46:38:25:13:38 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:41 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:27 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:46:0%:85:1E0:45:46:28:18:47 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:35 0/0:0:0:0:0:58:0%:99:1E0:48:58:29:29:58 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:42 0/0:0:0:0:0:42:0%:77:1E0:44:42:28:14:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:43 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 1/1:46:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:52:0%:96:1E0:40:52:22:30:52 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:44 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:18 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:47 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:53 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:48 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 1/1:49:29:15:14:30:96.67%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:43 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:49:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:54 0/0:0:0:0:0:15:0%:29:1E0:52:15:7:8:16 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 1/1:52:31:15:16:32:96.88%:99:1.8007E-17:38:1:1:0:33 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 1/1:46:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:28 0/0:0:0:0:0:39:0%:74:1E0:48:39:15:24:39 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:41 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:35 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:46:0%:85:1E0:44:46:31:15:46 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:22 1/1:42:35:16:19:36:97.22%:99:8.9137E-21:0:0:0:0:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:36 0/0:0:0:0:0:16:0%:29:1E0:53:16:7:9:16 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:43 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:33 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:37:1:1:0:48:2.08%:76:5E-1:41:47:34:13:48 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:26 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:21 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:38:1:1:0:40:2.5%:62:5E-1:44:39:23:16:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:24:16:43 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:42 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:22 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:37:32:16:16:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:39:1:0:1:32:3.12%:48:5E-1:41:31:17:14:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:33:0%:63:1E0:39:33:24:9:34 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:25 1/1:42:27:13:14:28:96.43%:99:3.7915E-15:35:1:1:0:28 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 0/0:0:0:0:0:61:0%:99:1E0:37:61:21:40:61 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:47 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:17:0%:33:1E0:49:17:4:13:17 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:44 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:42 MTB_anc 276685 . A C . PASS AC=10;AF=0.033;AN=300;ANN=C|missense_variant|MODERATE|fadE4_Rv0231|gene239|transcript|Transcript_gene239|Coding|1/1|c.628A>C|p.Asn210His|628/1707|628/1707|210/568||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.276685A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.276685A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:1:0:42:2.38%:66:5E-1:41:41:16:25:44 0/0:0:0:0:0:22:0%:40:1E0:53:22:9:13:23 0/0:0:0:0:0:55:0%:99:1E0:47:55:25:30:55 0/0:0:0:0:0:36:0%:66:1E0:48:36:21:15:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:28 0/0:0:0:0:0:34:0%:62:1E0:49:34:15:19:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 1/1:52:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:30:0%:55:1E0:52:30:14:16:30 0/0:0:0:0:0:52:0%:96:1E0:45:52:29:23:52 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:19 0/0:0:0:0:0:62:0%:99:1E0:47:62:32:30:62 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:36:0%:66:1E0:48:36:21:15:37 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:47 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:46:0%:85:1E0:46:46:24:22:47 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:14:0%:25:1E0:46:14:7:7:14 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:40:0%:74:1E0:53:40:20:20:40 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:55:0%:99:1E0:48:55:24:31:55 0/0:0:0:0:0:49:0%:93:1E0:47:49:24:25:49 0/0:0:0:0:0:52:0%:96:1E0:48:52:25:27:52 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:39:21:2:19:21 0/0:48:2:0:2:43:4.65%:60:2.4706E-1:45:41:26:15:44 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:38 1/1:49:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:15:0%:29:1E0:49:15:8:7:15 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:25:0%:48:1E0:49:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:43:0%:82:1E0:44:43:17:26:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:38 0/0:0:0:0:0:35:0%:67:1E0:50:35:19:16:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:55:0%:99:1E0:42:55:24:31:56 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:25 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:44 0/0:0:0:0:0:55:0%:99:1E0:44:55:30:25:57 0/0:0:0:0:0:25:0%:48:1E0:45:25:7:18:25 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:15:0%:29:1E0:56:15:4:11:15 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:50:34:18:16:35 0/0:0:0:0:0:39:0%:74:1E0:51:39:13:26:39 0/0:0:0:0:0:28:0%:51:1E0:50:28:11:17:28 0/0:0:0:0:0:49:0%:93:1E0:47:49:28:21:50 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:23:13:37 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:35 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:30 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:21 0/0:0:0:0:0:39:0%:74:1E0:44:39:24:15:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:26:0%:47:1E0:50:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:25 0/0:0:0:0:0:39:0%:74:1E0:50:39:24:15:39 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 1/1:44:43:19:24:46:93.48%:99:4.485E-23:53:3:1:2:46 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:37 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:50 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:31 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:33 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:30 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:21 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:26 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:44 0/0:0:0:0:0:43:0%:82:1E0:41:43:26:17:46 0/0:0:0:0:0:52:0%:96:1E0:41:52:23:29:53 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:40 0/0:0:0:0:0:58:0%:99:1E0:43:58:24:34:58 0/0:0:0:0:0:50:0%:92:1E0:43:50:17:33:50 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:44 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:42 0/0:38:1:1:0:67:1.49%:99:5E-1:42:66:31:35:71 0/0:0:0:0:0:39:0%:74:1E0:38:39:18:21:40 0/0:0:0:0:0:54:0%:99:1E0:42:54:28:26:55 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:48 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:45 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:60:0%:99:1E0:38:60:30:30:60 0/0:0:0:0:0:52:0%:96:1E0:46:52:22:30:53 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:57:0%:99:1E0:41:57:32:25:57 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:44 0/0:0:0:0:0:44:0%:81:1E0:46:44:18:26:45 0/0:0:0:0:0:41:0%:78:1E0:39:41:20:21:41 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:11:34:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 MTB_anc 279342 . C T . PASS AC=68;AF=0.227;AN=300;ANN=T|missense_variant|MODERATE|nrdB_Rv0233|gene241|transcript|Transcript_gene241|Coding|1/1|c.758C>T|p.Pro253Leu|758/945|758/945|253/314||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.279342C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.279342C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:47 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:21 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:49 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:21 1/1:44:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:49:29:11:18:29 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:50:0%:92:1E0:45:50:30:20:51 0/0:0:0:0:0:16:0%:29:1E0:43:16:9:7:16 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:36 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:22 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:24 1/1:44:17:11:6:18:94.44%:86:2.0936E-9:38:1:0:1:18 0/0:0:0:0:0:21:0%:40:1E0:46:21:18:3:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:20:8:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:26:15:42 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:30 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:25 1/1:52:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:19:6:26 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:27 0/0:0:0:0:0:25:0%:48:1E0:52:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:30:11:42 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:57:0%:99:1E0:44:57:38:19:58 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:50:0%:92:1E0:46:50:24:26:50 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:39 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:49:0%:93:1E0:41:49:30:19:49 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:45 0/0:0:0:0:0:18:0%:32:1E0:48:18:6:12:18 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:46 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:33:0%:63:1E0:42:33:23:10:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:44:0%:81:1E0:45:44:19:25:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:26 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:18:0%:32:1E0:45:18:6:12:18 0/0:25:1:0:1:27:3.7%:41:5E-1:46:26:13:13:28 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:41 1/1:51:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 0/0:0:0:0:0:16:0%:29:1E0:51:16:10:6:16 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:18 0/0:60:1:0:1:29:3.45%:45:5E-1:47:28:10:18:29 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:31 0/0:0:0:0:0:12:0%:21:1E0:40:12:4:8:12 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:33 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:26 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:30 1/1:37:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:15:0%:29:1E0:45:15:10:5:16 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:28 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:53 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:41 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:36 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:18:0%:32:1E0:41:18:15:3:19 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:19 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:44 0/0:0:0:0:0:26:0%:47:1E0:40:26:18:8:27 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:37:1:0:1:22:4.55%:31:5E-1:44:21:11:10:23 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:41 0/0:0:0:0:0:45:0%:85:1E0:40:45:29:16:49 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:59:0%:99:1E0:43:59:27:32:59 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:55 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:34 1/1:40:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:51 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:32 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:36 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:39 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:43 0/0:0:0:0:0:43:0%:82:1E0:40:43:31:12:44 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:48 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:41 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:66:0%:99:1E0:39:66:32:34:69 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:32 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:41 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:49:0%:93:1E0:43:49:35:14:51 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 MTB_anc 281692 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|stop_gained|HIGH|Rv0235c_Rv0235c|gene243|transcript|Transcript_gene243|Coding|1/1|c.923G>A|p.Trp308*|923/1449|923/1449|308/482||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.281692C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.281692C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:37:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:35:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:35:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:35:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:41:33:19:14:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 284623 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|aftD_Rv0236c|gene244|transcript|Transcript_gene244|Coding|1/1|c.2229C>T|p.Thr743Thr|2229/4203|2229/4203|743/1400||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.284623G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.284623G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:11:8:3:12:91.67%:53:4.8074E-6:38:1:1:0:13 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:37:23:14:38:97.37%:99:5.6582E-21:38:1:1:0:38 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:47:33:14:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:35:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:48:31:17:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 288454 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv0238_Rv0238|gene247|transcript|Transcript_gene247|Coding|1/1|c.27G>A|p.Pro9Pro|27/615|27/615|9/204||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.288454G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.288454G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:51 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:60:1:1:0:38:2.63%:58:5E-1:47:37:15:22:38 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:60:1:0:1:23:4.35%:34:5E-1:47:22:15:7:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:35 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:49 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:17 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:17:0%:33:1E0:44:17:6:11:17 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:27 0/0:0:0:0:0:51:0%:97:1E0:43:51:20:31:52 0/0:0:0:0:0:36:0%:66:1E0:45:36:9:27:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:32 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:30 0/0:0:0:0:0:16:0%:29:1E0:44:16:6:10:16 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:44 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:49 0/1:43:27:10:17:32:84.38%:99:2.3785E-13:40:5:2:3:32 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:20 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 0/0:37:1:1:0:37:2.7%:59:5E-1:45:36:14:22:39 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:41 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:0:0:0:0:22:0%:40:1E0:46:22:7:15:22 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:21:0%:40:1E0:52:21:14:7:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:47:0%:89:1E0:41:47:20:27:47 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 0/0:0:0:0:0:49:0%:93:1E0:45:49:14:35:49 0/0:0:0:0:0:36:0%:66:1E0:43:36:11:25:36 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:59:0%:99:1E0:45:59:23:36:61 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:15:0%:29:1E0:52:15:4:11:15 0/0:39:1:1:0:27:3.7%:41:5E-1:44:26:10:16:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:17:0%:33:1E0:47:17:8:9:17 0/0:0:0:0:0:37:0%:70:1E0:49:37:23:14:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:19 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:45:0%:85:1E0:46:45:21:24:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:41:0%:78:1E0:46:41:18:23:41 0/0:0:0:0:0:29:0%:55:1E0:50:29:9:20:29 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:46 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:49:0%:93:1E0:41:49:18:31:49 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:40:0%:74:1E0:39:40:15:25:41 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:24 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:14 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:41 0/0:0:0:0:0:37:0%:70:1E0:37:37:17:20:37 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:8:18:27 0/0:0:0:0:0:66:0%:99:1E0:42:66:36:30:66 0/0:39:1:1:0:46:2.17%:73:5E-1:40:45:21:24:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:18 0/0:0:0:0:0:33:0%:63:1E0:41:33:10:23:35 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:35 0/0:0:0:0:0:49:0%:93:1E0:39:49:20:29:50 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:35 0/0:0:0:0:0:47:0%:89:1E0:38:47:22:25:47 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:37 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:30 0/0:0:0:0:0:41:0%:78:1E0:41:41:27:14:42 0/0:0:0:0:0:35:0%:67:1E0:38:35:14:21:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:37 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:51:0%:97:1E0:37:51:17:34:53 0/0:0:0:0:0:44:0%:81:1E0:42:44:27:17:44 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:44 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:35 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:42 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:33 0/0:0:0:0:0:47:0%:89:1E0:39:47:20:27:47 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 MTB_anc 293628 . A AC . PASS AC=280;AF=0.933;AN=300;ANN=AC|custom|MODIFIER|||CUSTOM&additionnal_annotations|stable_RNAs|||n.293628_293629insC||||||,AC|non_coding_exon_variant|MODIFIER|F6_RVnc0008|gene253|transcript|rna3|Noncoding|1/1|n.30dupC||||||INFO_REALIGN_3_PRIME;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:42:26:16:42:97.67%:99:6.6289E-24:34:1:1:0:43 1/1:54:16:11:5:17:94.12%:81:7.7134E-9:33:1:1:0:17 1/1:45:57:28:29:61:93.44%:99:1.7664E-30:47:4:2:2:61 1/1:42:18:8:10:19:94.74%:92:5.6585E-10:32:1:1:0:19 1/1:43:24:13:11:23:100%:99:3.101E-14:0:0:0:0:24 0/1:42:16:10:6:18:88.89%:76:2.0936E-8:47:2:0:2:18 1/1:49:31:13:18:32:93.94%:99:8.2416E-17:34:2:0:2:33 1/1:46:25:17:8:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:45:19:8:11:19:95%:98:1.5234E-10:60:1:1:0:20 1/1:49:31:17:14:32:96.88%:99:1.8007E-17:38:1:0:1:32 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:52:32:20:53:96.3%:99:6.1952E-29:32:2:1:1:54 0/1:48:8:3:5:9:88.89%:36:2.0568E-4:60:1:0:1:9 1/1:42:44:23:21:45:95.65%:99:2.7459E-24:46:2:0:2:46 1/1:39:27:16:11:29:90%:99:4.6134E-14:42:3:1:2:30 1/1:44:32:17:15:33:94.12%:99:2.2142E-17:36:2:0:2:34 1/1:40:21:12:9:22:91.3%:99:3.6437E-11:33:2:0:2:23 1/1:43:21:12:9:23:91.3%:99:3.6437E-11:43:2:1:1:23 1/1:47:15:11:4:16:93.75%:75:2.8282E-8:34:1:0:1:17 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 0/1:36:15:8:7:15:88.24%:71:7.3277E-8:34:2:1:1:17 0/1:41:36:18:18:39:87.8%:99:3.2269E-18:38:5:0:5:41 0/1:49:27:18:9:32:84.38%:99:2.3785E-13:41:5:3:2:32 1/1:43:34:15:19:36:94.44%:99:3.2089E-19:33:1:0:1:36 1/1:43:33:17:16:33:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:30:16:14:31:96.77%:99:6.8754E-17:33:1:1:0:32 0/1:44:17:7:10:20:85%:78:1.2848E-8:44:3:3:0:20 0/1:45:23:12:11:26:88.46%:99:7.3681E-12:45:3:1:2:27 1/1:42:30:13:17:33:90.91%:99:9.89E-16:42:3:1:2:33 1/1:45:26:14:12:28:92.86%:99:5.6872E-14:46:2:2:0:28 1/1:39:34:22:12:32:94.44%:99:1.5887E-18:28:2:0:2:36 1/1:54:19:10:9:21:90.48%:93:4.7003E-10:47:2:0:2:21 1/1:43:21:16:5:23:91.3%:99:3.6437E-11:32:2:1:1:23 1/1:45:36:16:20:39:92.31%:99:4.2179E-19:42:3:1:2:39 1/1:39:23:11:12:20:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:43:22:21:42:97.73%:99:1.7144E-24:33:1:1:0:44 1/1:44:44:22:22:45:97.78%:99:4.4304E-25:34:1:0:1:45 1/1:45:47:25:22:50:92.16%:99:8.5347E-25:36:4:1:3:51 1/1:42:38:15:23:41:92.68%:99:3.1178E-20:36:3:1:2:41 1/1:36:27:13:14:29:90%:99:4.6134E-14:34:3:3:0:30 1/1:40:42:19:23:42:97.67%:99:6.6289E-24:33:1:1:0:43 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 0/1:44:28:13:15:32:87.5%:99:3.2142E-14:41:4:2:2:32 1/1:38:26:10:16:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:10:9:21:90.48%:93:4.7003E-10:44:2:1:1:21 0/1:45:19:9:10:22:86.36%:89:1.0931E-9:44:3:2:1:22 1/1:39:34:15:19:33:97.14%:99:3.2089E-19:35:1:0:1:35 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:40:20:20:44:90.91%:99:2.287E-21:51:3:2:1:44 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 0/1:42:42:23:19:47:89.36%:99:1.5987E-21:40:5:3:2:49 0/1:45:19:12:7:22:86.36%:89:1.0931E-9:43:3:1:2:22 1/1:42:22:10:12:23:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:48:22:26:49:96%:99:1.3143E-26:35:2:2:0:50 1/1:39:27:12:15:27:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:42:23:12:11:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:13:11:26:92.31%:99:7.6222E-13:36:2:2:0:26 1/1:48:43:22:21:46:93.48%:99:4.485E-23:42:3:1:2:46 0/1:43:24:14:10:27:88.89%:99:2.0853E-12:42:3:2:1:27 1/1:42:39:19:20:42:90.7%:99:2.6872E-20:32:4:3:1:43 1/1:39:36:20:16:36:97.3%:99:2.1762E-20:39:1:1:0:37 0/1:47:25:14:11:28:89.29%:99:5.8768E-13:33:3:1:2:28 1/1:45:33:19:14:34:97.06%:99:1.2301E-18:32:1:1:0:34 1/1:45:58:28:30:62:92.06%:99:1.7273E-30:33:5:5:0:63 1/1:43:30:17:13:28:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:40:17:23:42:95.24%:99:5.6346E-22:30:2:1:1:42 0/1:47:11:5:6:14:78.57%:47:1.6951E-5:43:3:3:0:14 0/1:44:22:10:12:26:84.62%:99:5.5261E-11:35:4:1:3:28 1/1:46:32:20:12:35:91.43%:99:7.5196E-17:36:3:3:0:35 1/1:49:31:16:15:33:93.94%:99:8.2416E-17:49:2:0:2:33 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:29:14:15:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:37:38:13:25:37:92.68%:99:3.1178E-20:43:3:1:2:41 1/1:45:29:21:8:28:100%:99:3.3259E-17:0:0:0:0:29 0/1:42:16:5:11:17:88.89%:76:2.0936E-8:47:2:0:2:18 1/1:47:35:17:18:36:94.59%:99:4.2437E-19:46:2:0:2:38 1/1:40:21:8:13:21:95.45%:99:1.0931E-11:34:1:1:0:22 1/1:44:25:17:8:25:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:41:25:10:15:26:96.15%:99:5.4444E-14:33:1:1:0:26 0/1:43:33:20:13:37:89.19%:99:5.7997E-17:32:4:2:2:37 1/1:39:31:9:22:31:93.94%:99:8.2416E-17:31:2:0:2:33 1/1:46:26:16:10:28:92.86%:99:5.6872E-14:33:2:0:2:28 1/1:42:36:20:16:39:92.31%:99:4.2179E-19:42:3:1:2:39 1/1:43:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:19:12:7:21:90.48%:93:4.7003E-10:31:2:1:1:21 0/1:43:14:9:5:16:87.5%:65:2.5454E-7:60:2:1:1:17 1/1:45:32:21:11:34:94.12%:99:2.2142E-17:46:2:2:0:34 1/1:50:17:9:8:18:94.44%:86:2.0936E-9:34:1:1:0:18 1/1:43:38:25:13:39:97.44%:99:1.4697E-21:60:1:0:1:39 0/1:44:23:10:13:25:88.46%:99:7.3681E-12:60:3:1:2:26 1/1:39:50:26:24:51:96.15%:99:9.0394E-28:33:2:2:0:52 1/1:40:21:8:13:23:91.3%:99:3.6437E-11:29:2:1:1:23 1/1:46:43:23:20:43:97.73%:99:1.7144E-24:60:1:0:1:44 1/1:41:19:11:8:20:95%:98:1.5234E-10:39:1:0:1:20 1/1:43:25:13:12:26:92.59%:99:2.0853E-13:37:2:2:0:27 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:42:25:17:38:97.67%:99:6.6289E-24:37:1:1:0:43 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:20:12:8:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:12:15:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:20:7:28:93.1%:99:1.5465E-14:35:2:2:0:29 1/1:37:29:18:11:27:96.67%:99:2.6212E-16:35:1:0:1:30 1/1:45:26:11:15:26:92.86%:99:5.6872E-14:34:2:1:1:28 1/1:43:27:13:14:30:90%:99:4.6134E-14:35:3:1:2:30 1/1:42:26:12:14:26:96.3%:99:1.4382E-14:33:1:1:0:27 1/1:45:31:17:14:32:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:34:18:16:34:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:43:35:20:15:37:94.59%:99:4.2437E-19:35:2:2:0:37 1/1:41:26:12:14:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:14:13:28:93.1%:99:1.5465E-14:46:2:2:0:29 1/1:39:35:19:16:33:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:41:42:23:19:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:43:25:18:44:95.56%:99:1.0412E-23:48:2:2:0:45 1/1:41:30:17:13:33:90.91%:99:9.89E-16:35:3:1:2:33 1/1:37:20:11:9:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:43:26:17:42:97.73%:99:1.7144E-24:33:1:0:1:44 1/1:39:44:22:22:44:95.65%:99:2.7459E-24:54:2:2:0:46 1/1:40:16:9:7:17:94.12%:81:7.7134E-9:32:1:0:1:17 1/1:42:29:14:15:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:51:26:25:51:94.44%:99:1.1771E-27:34:3:2:1:54 1/1:39:34:19:15:31:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:48:27:21:46:94.12%:99:6.2071E-26:41:3:1:2:51 1/1:37:33:17:16:33:94.29%:99:5.9366E-18:28:2:2:0:35 1/1:38:47:28:19:45:95.92%:99:5.0044E-26:37:2:2:0:49 1/1:38:31:18:13:33:91.18%:99:2.7308E-16:35:3:2:1:34 1/1:36:45:30:15:43:97.83%:99:1.1441E-25:39:1:1:0:46 1/1:37:29:13:16:27:96.67%:99:2.6212E-16:33:1:1:0:31 1/1:37:36:23:13:38:92.31%:99:4.2179E-19:32:3:0:3:39 1/1:37:29:16:13:28:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:39:38:18:20:39:95%:99:8.0088E-21:47:2:1:1:40 1/1:39:21:13:8:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:14:13:26:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:37:44:21:23:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:21:15:39:90%:99:1.2627E-18:40:4:1:3:40 1/1:42:37:17:20:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:41:28:13:15:29:93.33%:99:4.194E-15:34:2:1:1:30 1/1:44:25:14:11:27:92.59%:99:2.0853E-13:33:2:0:2:27 1/1:37:30:21:9:32:93.75%:99:3.0612E-16:35:2:2:0:32 1/1:45:39:26:13:40:95.12%:99:2.1258E-21:35:2:1:1:41 1/1:43:33:13:20:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:43:22:14:8:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:40:25:12:13:27:92.59%:99:2.0853E-13:33:2:0:2:27 1/1:41:47:20:27:49:95.92%:99:5.0044E-26:35:2:1:1:49 1/1:39:41:22:19:42:93.18%:99:1.4915E-22:47:2:0:2:44 0/1:41:36:17:19:40:87.8%:99:3.2269E-18:37:5:2:3:41 MTB_anc 294070 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|fadE5_Rv0244c|gene254|transcript|Transcript_gene254|Coding|1/1|c.1564G>T|p.Val522Phe|1564/1836|1564/1836|522/611||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.294070C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.294070C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:52:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:50:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:56:29:27:57:98.25%:99:2.5602E-33:0:0:0:0:57 1/1:49:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:76:37:39:76:100%:99:2.711E-45:0:0:0:0:76 1/1:45:44:23:21:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:52 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:56 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:53:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:47:23:24:48:97.92%:99:6.1512E-28:0:0:0:0:48 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:64:35:29:64:100%:99:4.1752E-38:0:0:0:0:67 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:55 1/1:38:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:60:27:33:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:51:37:14:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 MTB_anc 294974 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|fadE5_Rv0244c|gene254|transcript|Transcript_gene254|Coding|1/1|c.660C>G|p.Ala220Ala|660/1836|660/1836|220/611||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.294974G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.294974G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:48:0%:89:1E0:48:48:22:26:48 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:48:0%:89:1E0:47:48:29:19:48 0/0:0:0:0:0:26:0%:47:1E0:45:26:18:8:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:28 0/0:0:0:0:0:32:0%:59:1E0:53:32:11:21:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:54:0%:99:1E0:45:54:27:27:56 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:47 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:11:19:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:53:0%:99:1E0:46:53:24:29:53 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:37 0/0:0:0:0:0:26:0%:47:1E0:48:26:9:17:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:48:28:20:8:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:21:0%:40:1E0:46:21:15:6:22 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:32:0%:59:1E0:51:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:46 0/0:34:1:0:1:59:1.69%:98:5E-1:49:58:31:27:59 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:38:1:0:1:48:2.08%:76:5E-1:45:47:21:26:49 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:22:0%:40:1E0:45:22:16:6:23 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:20 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:22:10:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:43 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:43 0/0:0:0:0:0:10:0%:17:1E0:40:10:3:7:10 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:49 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:24 0/0:0:0:0:0:46:0%:85:1E0:46:46:20:26:46 0/0:0:0:0:0:29:0%:55:1E0:51:29:21:8:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:51 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:60:0%:99:1E0:46:60:29:31:60 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:4:17:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:32 0/0:0:0:0:0:39:0%:74:1E0:49:39:19:20:40 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:35:0%:67:1E0:39:35:22:13:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:38:1:0:1:34:2.94%:51:5E-1:47:33:19:14:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:27:1:1:0:44:2.27%:69:5E-1:41:43:18:25:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:7:20:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:34:0%:62:1E0:50:34:14:20:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:32 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:44 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:50:0%:92:1E0:42:50:29:21:51 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:38:1:1:0:31:3.23%:48:5E-1:43:30:19:11:32 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:21 0/0:0:0:0:0:23:0%:44:1E0:48:23:9:14:24 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:39 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:23 0/0:0:0:0:0:48:0%:89:1E0:38:48:23:25:49 0/0:0:0:0:0:42:0%:77:1E0:38:42:27:15:44 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:56:0%:99:1E0:43:56:31:25:56 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:52 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:34 0/0:0:0:0:0:45:0%:85:1E0:38:45:17:28:45 0/0:0:0:0:0:43:0%:82:1E0:40:43:18:25:46 0/0:0:0:0:0:59:0%:99:1E0:41:59:29:30:60 0/0:0:0:0:0:56:0%:99:1E0:39:56:25:31:60 0/0:0:0:0:0:46:0%:85:1E0:39:46:19:27:47 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:37 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:44 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:42 0/0:0:0:0:0:40:0%:74:1E0:39:40:13:27:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:33 0/0:0:0:0:0:35:0%:67:1E0:38:35:21:14:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:65:0%:99:1E0:38:65:30:35:67 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:52 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:42:0%:77:1E0:41:42:15:27:43 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:37:1:1:0:27:3.7%:41:5E-1:42:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:42 0/0:38:1:0:1:58:1.72%:94:5E-1:42:57:29:28:58 0/0:38:1:0:1:34:2.94%:51:5E-1:44:33:14:19:35 MTB_anc 304892 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|nirB_Rv0252|gene262|transcript|Transcript_gene262|Coding|1/1|c.2027T>G|p.Leu676Arg|2027/2562|2027/2562|676/853||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.304892T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.304892T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:51 0/0:0:0:0:0:18:0%:32:1E0:49:18:7:11:18 0/0:0:0:0:0:55:0%:99:1E0:44:55:24:31:55 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:39:0%:74:1E0:49:39:23:16:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:38:0%:70:1E0:49:38:23:15:39 0/0:0:0:0:0:41:0%:78:1E0:47:41:24:17:41 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:36 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:25:0%:48:1E0:46:25:19:6:26 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:29 0/0:0:0:0:0:24:0%:44:1E0:48:24:7:17:24 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:24 0/0:0:0:0:0:49:0%:93:1E0:43:49:23:26:49 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:33 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:20 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:50:42:18:24:43 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:42:0%:77:1E0:48:42:22:20:42 0/0:0:0:0:0:45:0%:85:1E0:47:45:17:28:45 0/0:0:0:0:0:43:0%:82:1E0:46:43:28:15:45 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:31:18:49 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:45:21:6:15:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:46 0/0:60:1:1:0:45:2.22%:73:5E-1:42:44:25:19:45 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:23:0%:44:1E0:48:23:8:15:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:50:26:11:15:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:51 0/0:0:0:0:0:57:0%:99:1E0:47:57:33:24:57 0/0:0:0:0:0:43:0%:82:1E0:48:43:24:19:43 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:73:0%:99:1E0:46:73:34:39:73 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:35 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:45:24:5:19:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:17 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:50:0%:92:1E0:43:50:18:32:50 0/0:0:0:0:0:41:0%:78:1E0:43:41:26:15:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:51:25:9:16:25 0/0:0:0:0:0:52:0%:96:1E0:42:52:23:29:52 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:54:0%:99:1E0:43:54:29:25:55 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:44:0%:81:1E0:46:44:22:22:46 0/0:0:0:0:0:47:0%:89:1E0:42:47:19:28:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:26:14:40 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:35 0/0:0:0:0:0:27:0%:52:1E0:51:27:15:12:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:34:0%:62:1E0:48:34:21:13:34 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:41 0/0:0:0:0:0:55:0%:99:1E0:41:55:26:29:56 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:44:0%:81:1E0:47:44:18:26:45 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:68:0%:99:1E0:43:68:34:34:69 0/0:0:0:0:0:48:0%:89:1E0:41:48:19:29:48 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:50 0/0:33:1:0:1:44:2.27%:69:5E-1:39:43:19:24:45 0/0:0:0:0:0:59:0%:99:1E0:42:59:23:36:60 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:48 0/0:0:0:0:0:48:0%:89:1E0:40:48:29:19:49 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:53 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:34 0/0:0:0:0:0:51:0%:97:1E0:40:51:24:27:55 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:31 0/0:37:1:0:1:37:2.7%:59:5E-1:43:36:17:19:37 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:53:0%:99:1E0:39:53:26:27:54 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:17:29:46 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:23 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:50:0%:92:1E0:40:50:20:30:50 0/0:0:0:0:0:30:0%:55:1E0:41:30:22:8:30 MTB_anc 305106 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|nirB_Rv0252|gene262|transcript|Transcript_gene262|Coding|1/1|c.2241C>T|p.Asp747Asp|2241/2562|2241/2562|747/853||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.305106C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.305106C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:47:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:36:19:17:38:94.74%:99:1.1316E-19:49:2:0:2:39 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:10:13:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:51:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:46:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:63:33:30:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:67:34:33:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:34:17:17:35:97.14%:99:3.2089E-19:35:1:1:0:35 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:63:28:35:63:100%:99:1.657E-37:0:0:0:0:64 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 MTB_anc 306413 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|synonymous_variant|LOW|cobQ1_Rv0255c|gene265|transcript|Transcript_gene265|Coding|1/1|c.1446C>T|p.Cys482Cys|1446/1485|1446/1485|482/494||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.306413G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.306413G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:39:43:27:16:44 0/0:0:0:0:0:12:0%:21:1E0:47:12:7:5:12 0/0:60:1:0:1:36:2.78%:55:5E-1:45:35:18:17:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:29 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:24 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:0:0:0:0:17:0%:33:1E0:42:17:12:5:17 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:21 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:41 0/0:0:0:0:0:15:0%:29:1E0:44:15:11:4:15 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:50 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:17:0%:33:1E0:44:17:12:5:17 0/0:0:0:0:0:15:0%:29:1E0:42:15:9:6:17 0/0:0:0:0:0:25:0%:48:1E0:49:25:18:7:26 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:0:0:0:0:54:0%:99:1E0:40:54:29:25:57 0/0:0:0:0:0:29:0%:55:1E0:49:29:20:9:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:17:8:27 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:20 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:56:0%:99:1E0:47:56:30:26:57 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:52:0%:96:1E0:41:52:28:24:53 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:45:0%:85:1E0:44:45:31:14:46 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:36 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:43 0/0:0:0:0:0:45:0%:85:1E0:46:45:27:18:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:41 0/0:0:0:0:0:47:0%:89:1E0:42:47:31:16:49 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:42 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:61:0%:99:1E0:41:61:36:25:61 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:36 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 0/0:0:0:0:0:46:0%:85:1E0:43:46:30:16:48 0/0:0:0:0:0:32:0%:59:1E0:50:32:17:15:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:41 0/0:0:0:0:0:41:0%:78:1E0:40:41:25:16:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:37 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:32 0/0:0:0:0:0:53:0%:99:1E0:41:53:37:16:53 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:21 0/0:37:1:1:0:28:3.57%:41:5E-1:48:27:14:13:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:37 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:31 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:26:5:33 0/0:0:0:0:0:45:0%:85:1E0:42:45:28:17:46 0/0:0:0:0:0:37:0%:70:1E0:45:37:25:12:38 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:48 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:19:7:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:38 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:16 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:51:0%:97:1E0:38:51:34:17:52 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:25:12:39 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:42 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:43 0/0:0:0:0:0:35:0%:67:1E0:46:35:23:12:37 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:26 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:16 0/0:0:0:0:0:38:0%:70:1E0:47:38:22:16:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:45 0/0:0:0:0:0:38:0%:70:1E0:38:38:22:16:38 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:43 0/0:0:0:0:0:53:0%:99:1E0:42:53:37:16:53 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:44 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:33 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:49 0/0:0:0:0:0:36:0%:66:1E0:37:36:12:24:39 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:44:0%:81:1E0:40:44:28:16:44 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:55:0%:99:1E0:39:55:35:20:58 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:26:9:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:43 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:31 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:41 0/0:0:0:0:0:45:0%:85:1E0:39:45:31:14:46 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:30:0%:55:1E0:43:30:22:8:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:25:12:38 0/0:0:0:0:0:35:0%:67:1E0:45:35:24:11:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:15:7:22 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:34 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 MTB_anc 309765 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|stop_lost|HIGH|Rv0257_Rv0257|gene267|transcript|Transcript_gene267|Coding|1/1|c.67T>C|p.Ter23Argext*?|67/375|67/375|23/124||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.309765T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.309765T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:52:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:68:27:41:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:10:16:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:44:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:55:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:58:31:27:60:96.67%:99:1.9573E-32:35:2:1:1:62 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:31:22:9:32:96.88%:99:1.8007E-17:38:1:1:0:32 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:50:22:28:51:98.04%:99:1.3013E-28:37:1:0:1:51 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:69:30:39:69:100%:99:4.233E-41:0:0:0:0:69 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:37:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:61:34:27:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:19:10:30:96.67%:99:2.6212E-16:37:1:0:1:30 1/1:42:41:28:13:42:97.62%:99:2.5612E-23:60:1:1:0:42 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 318298 . T C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|oplA_Rv0266c|gene276|transcript|Transcript_gene276|Coding|1/1|c.2857A>G|p.Ser953Gly|2857/3630|2857/3630|953/1209||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.318298T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.318298T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:44:44:16:28:44 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:19 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 0/0:0:0:0:0:24:0%:44:1E0:51:24:11:13:26 0/0:0:0:0:0:27:0%:52:1E0:50:27:16:11:27 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:23 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:17:0%:33:1E0:49:17:7:10:18 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:46 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:17:0%:33:1E0:46:17:5:12:18 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:19 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:33:0%:63:1E0:49:33:12:21:34 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:48 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:38 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:14 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:49 0/0:0:0:0:0:20:0%:36:1E0:46:20:6:14:20 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:21:6:27 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:51:0%:97:1E0:44:51:27:24:53 0/0:0:0:0:0:39:0%:74:1E0:45:39:11:28:39 0/0:0:0:0:0:44:0%:81:1E0:48:44:21:23:44 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:24 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:42 0/0:0:0:0:0:44:0%:81:1E0:41:44:18:26:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:53:0%:99:1E0:43:53:28:25:54 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:42 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:47:0%:89:1E0:43:47:28:19:48 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:39 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:44 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:56:0%:99:1E0:44:56:28:28:57 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:33 0/0:0:0:0:0:52:0%:96:1E0:45:52:19:33:52 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:19:0%:37:1E0:53:19:9:10:20 0/0:0:0:0:0:16:0%:29:1E0:42:16:6:10:16 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:23 0/0:0:0:0:0:18:0%:32:1E0:51:18:7:11:19 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:57:0%:99:1E0:44:57:23:34:57 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/1:36:8:3:5:58:13.79%:25:3.0172E-3:42:50:24:26:58 0/0:0:0:0:0:29:0%:55:1E0:45:29:23:6:29 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:50:0%:92:1E0:41:50:31:19:51 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:39 0/0:0:0:0:0:14:0%:25:1E0:50:14:5:9:14 0/0:0:0:0:0:37:0%:70:1E0:48:37:15:22:37 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:46:33:11:22:34 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:51:0%:97:1E0:40:51:27:24:53 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:32:0%:59:1E0:40:32:21:11:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:22 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:5:17:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:5:16:22 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:45 0/0:0:0:0:0:57:0%:99:1E0:45:57:30:27:59 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:18 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:42 0/0:0:0:0:0:35:0%:67:1E0:38:35:22:13:36 0/0:0:0:0:0:40:0%:74:1E0:38:40:26:14:41 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:42:0%:77:1E0:37:42:23:19:42 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:44 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:43:0%:82:1E0:38:43:22:21:45 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:44 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:22:8:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:26:1:1:0:35:2.86%:55:5E-1:42:34:18:16:35 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:33 0/0:0:0:0:0:41:0%:78:1E0:39:41:20:21:41 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 MTB_anc 320180 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|oplA_Rv0266c|gene276|transcript|Transcript_gene276|Coding|1/1|c.975C>T|p.Ile325Ile|975/3630|975/3630|325/1209||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.320180G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.320180G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:51:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 322755 . C T . PASS AC=6;AF=0.020;AN=300;ANN=T|intergenic_region|MODIFIER|narU_Rv0267-Rv0268c_Rv0268c|gene277-gene278|intergenic_region|gene277-gene278|||n.322755C>T||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:40 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:48:31:14:17:33 0/0:0:0:0:0:33:0%:63:1E0:50:33:10:23:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:35 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:39 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:26 0/0:0:0:0:0:55:0%:99:1E0:43:55:22:33:55 0/1:50:7:3:4:31:22.58%:22:5.3469E-3:45:24:11:13:31 0/1:45:11:2:9:36:30.56%:37:1.9879E-4:48:25:12:13:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:44:0%:81:1E0:42:44:13:31:45 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:15 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:60:0%:99:1E0:48:60:24:36:60 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:55:0%:99:1E0:48:55:23:32:56 0/0:0:0:0:0:44:0%:81:1E0:46:44:26:18:44 0/0:0:0:0:0:52:0%:96:1E0:46:52:24:28:52 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:50 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:25 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:46 0/0:0:0:0:0:41:0%:78:1E0:46:41:14:27:42 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:55:0%:99:1E0:44:55:31:24:56 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:52:0%:96:1E0:45:52:26:26:52 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:49 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:45:0%:85:1E0:50:45:22:23:45 0/0:0:0:0:0:54:0%:99:1E0:45:54:24:30:54 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:31 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:40 0/0:0:0:0:0:14:0%:25:1E0:46:14:4:10:14 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:37 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:22 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:25 0/0:0:0:0:0:33:0%:63:1E0:45:33:10:23:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:43 0/0:0:0:0:0:31:0%:59:1E0:46:31:10:21:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:28:0%:51:1E0:53:28:12:16:30 0/0:0:0:0:0:56:0%:99:1E0:41:56:21:35:56 0/0:0:0:0:0:46:0%:85:1E0:43:46:17:29:46 0/0:60:1:0:1:40:2.5%:62:5E-1:42:39:21:18:40 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:50:0%:92:1E0:45:50:20:30:50 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:10:22:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:13:28:43 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:45 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:9:21:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:13:24:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:22:0%:40:1E0:41:22:7:15:22 0/0:0:0:0:0:48:0%:89:1E0:44:48:33:15:48 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:53 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:42 0/0:0:0:0:0:44:0%:81:1E0:44:44:14:30:44 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:65:0%:99:1E0:42:65:26:39:66 0/0:0:0:0:0:42:0%:77:1E0:39:42:20:22:43 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:33 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:45 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:37 0/0:0:0:0:0:53:0%:99:1E0:41:53:21:32:54 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:41 0/0:0:0:0:0:39:0%:74:1E0:38:39:20:19:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:11:25:38 0/0:0:0:0:0:50:0%:92:1E0:37:50:15:35:52 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:43 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:43 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:61:0%:99:1E0:40:61:36:25:63 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:37 0/0:0:0:0:0:50:0%:92:1E0:45:50:17:33:50 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:45 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:47 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:50 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:46:0%:85:1E0:44:46:16:30:46 0/0:0:0:0:0:52:0%:96:1E0:42:52:19:33:53 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:41 MTB_anc 325505 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|fadD2_Rv0270|gene280|transcript|Transcript_gene280|Coding|1/1|c.939C>T|p.Val313Val|939/1683|939/1683|313/560||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.325505C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.325505C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:60:25:35:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:17:24:42:97.62%:99:2.5612E-23:38:1:1:0:43 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:61:26:35:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:48:30:18:49:97.96%:99:1.9625E-27:38:1:0:1:49 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:50:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:49:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:52:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 326851 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|fadE6_Rv0271c|gene281|transcript|Transcript_gene281|Coding|1/1|c.1611A>C|p.Lys537Asn|1611/2196|1611/2196|537/731||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.326851T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.326851T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:20:1:0:1:41:2.44%:66:5E-1:41:40:20:20:41 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:27 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:44 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:26 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:41 0/0:0:0:0:0:51:0%:97:1E0:50:51:25:26:52 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:32:0%:59:1E0:49:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:55:31:13:18:31 0/0:0:0:0:0:38:0%:70:1E0:47:38:13:25:39 0/0:0:0:0:0:17:0%:33:1E0:52:17:9:8:17 0/0:0:0:0:0:63:0%:99:1E0:46:63:34:29:65 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:23 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:28:0%:51:1E0:49:28:10:18:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:30:0%:55:1E0:51:30:16:14:31 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:18 0/0:0:0:0:0:47:0%:89:1E0:47:47:18:29:50 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:33:0%:63:1E0:48:33:21:12:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:25:15:42 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:46 0/0:0:0:0:0:61:0%:99:1E0:49:61:30:31:61 0/0:0:0:0:0:37:0%:70:1E0:48:37:11:26:37 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:51 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:44 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:38 0/0:20:1:0:1:34:2.94%:51:5E-1:46:33:15:18:35 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:30 0/0:0:0:0:0:46:0%:85:1E0:46:46:20:26:46 0/0:0:0:0:0:39:0%:74:1E0:49:39:17:22:39 0/0:0:0:0:0:20:0%:36:1E0:52:20:5:15:20 0/0:0:0:0:0:24:0%:44:1E0:51:24:8:16:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:60:0%:99:1E0:43:60:27:33:62 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:28 0/0:0:0:0:0:56:0%:99:1E0:44:56:27:29:56 0/0:0:0:0:0:35:0%:67:1E0:54:35:17:18:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:38:0%:70:1E0:48:38:17:21:38 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:20:0%:36:1E0:49:20:12:8:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:40:0%:74:1E0:48:40:25:15:40 0/0:0:0:0:0:25:0%:48:1E0:52:25:16:9:25 0/0:0:0:0:0:25:0%:48:1E0:52:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:50:25:14:11:25 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:32:0%:59:1E0:51:32:10:22:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:52:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:41:0%:78:1E0:43:41:14:27:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:20 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:42 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:32 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:44 0/0:0:0:0:0:23:0%:44:1E0:44:23:7:16:23 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:44 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:26:0%:47:1E0:50:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:16:0%:29:1E0:43:16:7:9:17 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:35:0%:67:1E0:46:35:13:22:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:42:0%:77:1E0:48:42:18:24:42 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:35 0/0:0:0:0:0:33:0%:63:1E0:48:33:8:25:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:47 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:66:0%:99:1E0:45:66:39:27:66 0/0:0:0:0:0:56:0%:99:1E0:42:56:31:25:56 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:40 0/0:0:0:0:0:65:0%:99:1E0:41:65:31:34:67 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:43 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:47 0/0:0:0:0:0:57:0%:99:1E0:40:57:31:26:57 0/0:0:0:0:0:57:0%:99:1E0:42:57:27:30:58 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:45 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:48:0%:89:1E0:41:48:20:28:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:66:0%:99:1E0:39:66:33:33:66 0/0:0:0:0:0:38:0%:70:1E0:43:38:26:12:38 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:43 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:21:10:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:67:0%:99:1E0:43:67:30:37:67 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 MTB_anc 331588 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0275c_Rv0275c|gene285|transcript|Transcript_gene285|Coding|1/1|c.71T>C|p.Leu24Ser|71/726|71/726|24/241||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.331588A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|isoniazid|||n.331588A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.331588A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:49:20:29:50:98%:99:5.0549E-28:60:1:1:0:50 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:23:10:13:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:53:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:63:28:35:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:60:27:33:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:48:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:60:37:23:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:63:33:30:63:100%:99:1.657E-37:0:0:0:0:65 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:43:17:26:44:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 332265 . T C . PASS AC=4;AF=0.013;AN=300;ANN=C|missense_variant|MODERATE|Rv0276_Rv0276|gene286|transcript|Transcript_gene286|Coding|1/1|c.518T>C|p.Met173Thr|518/921|518/921|173/306||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.332265T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.332265T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:48:0%:89:1E0:47:48:27:21:48 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:24 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:36:0%:66:1E0:49:36:25:11:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:47:30:10:20:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:52 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:42:0%:77:1E0:46:42:25:17:42 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:36 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:55:0%:99:1E0:46:55:21:34:55 0/0:0:0:0:0:24:0%:44:1E0:51:24:16:8:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:21:0%:40:1E0:48:21:7:14:21 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:48:37:21:16:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:59:0%:99:1E0:46:59:32:27:60 0/0:0:0:0:0:60:0%:99:1E0:48:60:34:26:60 0/0:0:0:0:0:38:0%:70:1E0:46:38:23:15:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:45:0%:85:1E0:46:45:23:22:45 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:47:0%:89:1E0:40:47:22:25:48 0/0:0:0:0:0:51:0%:97:1E0:48:51:20:31:51 0/0:0:0:0:0:21:0%:40:1E0:50:21:14:7:21 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:39 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:0:0:0:0:45:0%:85:1E0:41:45:13:32:46 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:38 0/0:0:0:0:0:52:0%:96:1E0:45:52:24:28:55 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:33 0/0:0:0:0:0:54:0%:99:1E0:47:54:27:27:55 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:13:24:39 0/0:0:0:0:0:16:0%:29:1E0:49:16:8:8:16 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:17 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:19 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:50:39:21:18:39 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:26:0%:47:1E0:52:26:11:15:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:11:21:33 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:23 0/0:0:0:0:0:36:0%:66:1E0:47:36:12:24:36 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:55:0%:99:1E0:40:55:26:29:56 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:47 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:45 0/0:0:0:0:0:31:0%:59:1E0:47:31:10:21:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:24:15:40 0/0:0:0:0:0:26:0%:47:1E0:45:26:6:20:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:27:0%:52:1E0:45:27:7:20:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:55 0/0:0:0:0:0:33:0%:63:1E0:38:33:22:11:34 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:46 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:44 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:55:0%:99:1E0:42:55:29:26:55 0/0:0:0:0:0:49:0%:93:1E0:41:49:16:33:50 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:24 0/0:0:0:0:0:60:0%:99:1E0:39:60:32:28:62 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:47 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 1/1:40:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:44 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:40 0/0:0:0:0:0:39:0%:74:1E0:39:39:22:17:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:66:0%:99:1E0:39:66:32:34:67 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:47 0/0:0:0:0:0:50:0%:92:1E0:43:50:30:20:50 0/0:0:0:0:0:53:0%:99:1E0:42:53:32:21:54 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:35 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:44 0/0:0:0:0:0:54:0%:99:1E0:42:54:25:29:54 0/0:0:0:0:0:64:0%:99:1E0:42:64:30:34:67 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:34 MTB_anc 333212 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.333212C>G||||||,G|intragenic_variant|MODIFIER|vapB25_Rv0277A|gene288|gene_variant|gene288|||n.333212C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:19:15:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:18:9:9:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:45:23:22:46:97.83%:99:1.1441E-25:60:1:1:0:48 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:67:26:41:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:13:16:30:96.67%:99:2.6212E-16:39:1:0:1:31 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:58:33:25:59:98.31%:99:1.6283E-34:0:0:0:0:59 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:10:11:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:47:30:17:48:97.92%:99:6.1512E-28:0:0:0:0:49 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:60:39:21:60:100%:99:1.035E-35:0:0:0:0:62 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:63:29:34:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:17:14:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:45:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:45:33:12:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:35:28:7:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:34 MTB_anc 333292 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.333292G>A||||||,A|intragenic_variant|MODIFIER|vapB25_Rv0277A|gene288|gene_variant|gene288|||n.333292G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:53:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:11:16:28:96.43%:99:3.7915E-15:37:1:0:1:31 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:50:29:16:13:30:96.67%:99:2.6212E-16:60:1:0:1:31 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:49:61:24:37:61:100%:99:2.609E-36:0:0:0:0:64 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:43:22:21:44:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:61:29:32:61:100%:99:2.609E-36:0:0:0:0:62 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:58 1/1:49:38:21:17:39:97.44%:99:1.4508E-22:0:0:0:0:42 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:49:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:21:19:41:97.56%:99:9.8874E-23:34:1:1:0:41 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:36:18:18:37:97.3%:99:2.2598E-21:0:0:0:0:39 1/1:47:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:50:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:36:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 333680 . C G . PASS AC=277;AF=0.989;AN=280;ANN=G|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.2631G>C|p.Glu877Asp|2631/2874|2631/2874|877/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.333680C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.333680C>G||||||;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 0/1:38:8:6:2:8:88.89%:41:7.77E-5:0:0:0:0:9 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:14:8:6:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:39:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:13:9:4:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:9:4:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:21:15:6:21:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:36:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:14:12:2:14:93.33%:76:2.4927E-8:0:0:0:0:16 1/1:37:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:14:6:8:14:93.33%:76:2.4927E-8:0:0:0:0:16 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:17:17:0:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:20:16:4:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:11:10:1:11:91.67%:58:1.4176E-6:0:0:0:0:12 1/1:35:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:11 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 0/1:35:13:10:3:14:86.67%:70:9.6148E-8:0:0:0:0:16 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 0/1:35:8:7:1:9:88.89%:41:7.77E-5:0:0:0:0:9 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:12:10:2:12:92.31%:64:3.698E-7:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:15 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:26:23:3:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 MTB_anc 334091 . T G . PASS AC=4;AF=0.017;AN=230;ANN=G|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.2220A>C|p.Gly740Gly|2220/2874|2220/2874|740/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.334091T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.334091T>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:14:0%:25:1E0:37:14:10:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:19:0%:37:1E0:35:19:14:5:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:13:0%:25:1E0:36:13:10:3:13 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:8:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:36:11:9:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:38:7:6:1:8 0/0:0:0:0:0:13:0%:25:1E0:36:13:11:2:13 0/0:0:0:0:0:9:0%:18:1E0:37:9:7:2:9 0/0:0:0:0:0:10:0%:17:1E0:37:10:8:2:10 0/0:0:0:0:0:8:0%:14:1E0:34:8:6:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:8:0%:14:1E0:36:8:7:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:37:12:11:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 0/0:0:0:0:0:13:0%:25:1E0:37:13:12:1:16 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:15 0/0:0:0:0:0:12:0%:21:1E0:37:12:9:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:36:12:12:0:13 0/0:0:0:0:0:10:0%:17:1E0:37:10:9:1:10 0/0:0:0:0:0:11:0%:22:1E0:37:11:9:2:11 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:12 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:13 0/0:0:0:0:0:13:0%:25:1E0:36:13:10:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:12:0%:21:1E0:36:12:10:2:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:9:3:15 0/0:0:0:0:0:21:0%:40:1E0:36:21:16:5:22 0/0:0:0:0:0:17:0%:33:1E0:36:17:13:4:17 0/0:0:0:0:0:16:0%:29:1E0:37:16:14:2:17 0/0:0:0:0:0:15:0%:29:1E0:37:15:13:2:15 0/0:0:0:0:0:13:0%:25:1E0:36:13:10:3:13 0/0:0:0:0:0:8:0%:14:1E0:37:8:7:1:9 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 0/0:0:0:0:0:14:0%:25:1E0:36:14:10:4:15 0/0:0:0:0:0:23:0%:44:1E0:37:23:18:5:28 0/0:0:0:0:0:8:0%:14:1E0:37:8:5:3:9 0/0:0:0:0:0:11:0%:22:1E0:37:11:10:1:12 0/0:0:0:0:0:21:0%:40:1E0:36:21:17:4:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:17:3:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:37:10:8:2:11 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:36:14:12:2:14 0/0:0:0:0:0:14:0%:25:1E0:36:14:13:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:10 0/0:0:0:0:0:12:0%:21:1E0:36:12:9:3:13 0/0:0:0:0:0:10:0%:17:1E0:36:10:8:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:36:15:14:1:16 0/0:0:0:0:0:20:0%:36:1E0:36:20:15:5:20 0/0:0:0:0:0:7:0%:14:1E0:36:7:6:1:8 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:14:0%:25:1E0:37:14:11:3:14 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:14 0/0:0:0:0:0:17:0%:33:1E0:36:17:11:6:17 0/0:0:0:0:0:17:0%:33:1E0:37:17:13:4:20 0/0:0:0:0:0:11:0%:22:1E0:36:11:9:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:25:1E0:36:13:10:3:13 0/0:0:0:0:0:11:0%:22:1E0:36:11:10:1:13 0/0:0:0:0:0:16:0%:29:1E0:38:16:15:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:35:10:10:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:36:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:37:8:7:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:11 0/0:0:0:0:0:12:0%:21:1E0:35:12:8:4:12 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:12 0/0:0:0:0:0:7:0%:14:1E0:37:7:5:2:7 0/0:0:0:0:0:13:0%:25:1E0:37:13:11:2:15 0/0:0:0:0:0:7:0%:14:1E0:37:7:6:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:36:16:12:4:18 0/0:0:0:0:0:17:0%:33:1E0:36:17:12:5:18 0/0:0:0:0:0:16:0%:29:1E0:35:16:11:5:16 0/0:0:0:0:0:14:0%:25:1E0:35:14:11:3:15 0/0:0:0:0:0:16:0%:29:1E0:34:16:12:4:19 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:10 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 0/0:0:0:0:0:11:0%:22:1E0:37:11:9:2:12 0/0:0:0:0:0:10:0%:17:1E0:36:10:9:1:12 0/0:0:0:0:0:9:0%:18:1E0:37:9:7:2:10 0/0:0:0:0:0:26:0%:47:1E0:37:26:19:7:28 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:18 0/0:0:0:0:0:23:0%:44:1E0:36:23:20:3:23 0/0:0:0:0:0:23:0%:44:1E0:35:23:19:4:24 0/0:0:0:0:0:22:0%:40:1E0:37:22:16:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:37:11:9:2:11 0/0:0:0:0:0:15:0%:29:1E0:36:15:11:4:15 0/0:0:0:0:0:10:0%:17:1E0:37:10:9:1:10 0/0:0:0:0:0:7:0%:14:1E0:35:7:7:0:7 0/0:0:0:0:0:10:0%:17:1E0:35:10:8:2:13 0/0:0:0:0:0:7:0%:14:1E0:37:7:6:1:7 0/0:0:0:0:0:13:0%:25:1E0:37:13:12:1:13 0/0:0:0:0:0:13:0%:25:1E0:36:13:11:2:14 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:11 0/0:0:0:0:0:9:0%:18:1E0:36:9:7:2:9 0/0:0:0:0:0:8:0%:14:1E0:34:8:7:1:9 0/0:0:0:0:0:10:0%:17:1E0:36:10:8:2:10 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:10 0/0:0:0:0:0:7:0%:14:1E0:36:7:7:0:8 0/0:0:0:0:0:15:0%:29:1E0:36:15:14:1:16 0/0:0:0:0:0:10:0%:17:1E0:36:10:9:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:9:0%:18:1E0:36:9:9:0:9 0/0:0:0:0:0:9:0%:18:1E0:36:9:8:1:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:8:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:14:0%:25:1E0:36:14:12:2:14 0/0:0:0:0:0:16:0%:29:1E0:36:16:13:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:37:11:11:0:12 0/0:0:0:0:0:12:0%:21:1E0:35:12:11:1:12 0/0:0:0:0:0:20:0%:36:1E0:37:20:15:5:22 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:10 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 0/0:0:0:0:0:17:0%:33:1E0:36:17:12:5:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:19:0%:37:1E0:37:19:17:2:19 0/0:0:0:0:0:11:0%:22:1E0:35:11:9:2:11 MTB_anc 334641 . G C . PASS AC=51;AF=0.198;AN=258;ANN=C|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.1670C>G|p.Ala557Gly|1670/2874|1670/2874|557/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.334641G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.334641G>C||||||;HOM=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:6:6:0:16:37.5%:20:8.837E-3:44:10:8:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:14:10:4:22:63.64%:55:2.7817E-6:42:8:5:3:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:5:5:0:13:38.46%:4:1.9565E-2:39:8:4:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:38:3:2:1:13:23.08%:9:1.1E-1:43:10:5:5:13 0/0:36:2:1:1:13:15.38%:13:2.4E-1:46:11:5:6:13 0/0:37:5:3:2:12:41.67%:3:1.8634E-2:36:7:1:6:13 0/0:38:4:1:3:16:25%:8:5.0612E-2:46:12:6:6:16 0/0:36:3:3:0:10:30%:4:1.0526E-1:42:7:3:4:11 0/0:36:4:4:0:14:28.57%:6:4.8889E-2:36:10:6:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:6:5:1:23:26.09%:11:1.0777E-2:43:17:11:6:23 0/0:38:3:2:1:9:33.33%:4:1.0294E-1:44:6:3:3:9 0/1:38:7:7:0:13:53.85%:25:2.6087E-3:40:6:4:2:15 0/1:36:8:6:2:11:72.73%:32:5.16E-4:51:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:4:2:2:15:26.67%:8:4.9808E-2:36:11:5:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:13:10:3:26:50%:47:1.6379E-5:38:13:4:9:26 0/1:38:6:5:1:11:54.55%:22:6.192E-3:42:5:2:3:11 0/0:36:3:2:1:16:18.75%:11:1.129E-1:46:13:6:7:16 0/1:37:7:6:1:18:38.89%:24:3.8123E-3:42:11:6:5:18 0/0:37:2:1:1:8:25%:5:2.3333E-1:44:6:3:3:9 0/0:37:2:0:2:14:14.29%:12:2.4074E-1:41:12:10:2:14 0/0:37:4:4:0:11:36.36%:4:4.5113E-2:46:7:3:4:11 0/0:36:3:2:1:10:30%:4:1.0526E-1:43:7:4:3:11 0/0:36:4:4:0:13:30.77%:6:4.7826E-2:42:9:4:5:13 0/0:38:4:3:1:14:28.57%:6:4.8889E-2:48:10:7:3:15 0/1:37:6:4:2:17:35.29%:20:9.2021E-3:45:11:8:3:17 0/0:36:2:2:0:17:11.76%:18:2.4242E-1:44:15:10:5:17 0/0:38:3:3:0:9:33.33%:4:1.0294E-1:38:6:4:2:10 0/1:36:8:4:4:15:53.33%:29:1.0995E-3:39:7:3:4:15 0/0:38:4:4:0:13:30.77%:6:4.7826E-2:45:9:5:4:13 0/1:37:8:4:4:16:50%:29:1.2236E-3:45:8:6:2:16 0/1:36:9:8:1:21:42.86%:31:6.592E-4:46:12:7:5:22 0/1:38:6:3:3:13:46.15%:21:7.4534E-3:47:7:5:2:13 0/1:37:9:6:3:24:37.5%:31:7.7962E-4:39:15:7:8:24 0/1:38:13:10:3:24:54.17%:48:1.2938E-5:40:11:6:5:24 0/1:36:7:6:1:15:46.67%:25:3.1609E-3:37:8:5:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:2:1:10:30%:4:1.0526E-1:37:7:5:2:10 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:43:15:8:7:17 0/0:37:4:1:3:18:22.22%:10:5.1948E-2:42:14:7:7:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:6:4:2:11:54.55%:22:6.192E-3:34:5:3:2:11 0/1:37:8:6:2:23:34.78%:27:1.8791E-3:41:15:7:8:23 0/1:37:8:5:3:23:34.78%:27:1.8791E-3:40:15:9:6:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:7:6:1:21:33.33%:23:4.3101E-3:47:14:8:6:23 0/0:37:4:2:2:11:36.36%:4:4.5113E-2:46:7:5:2:12 0/1:36:6:4:2:16:37.5%:20:8.837E-3:43:10:7:3:16 0/1:37:7:6:1:18:38.89%:24:3.8123E-3:40:11:8:3:20 0/0:37:5:5:0:15:33.33%:6:2.1073E-2:41:10:6:4:15 0/1:36:6:5:1:14:42.86%:20:7.971E-3:43:8:7:1:14 0/0:37:5:4:1:11:45.45%:3:1.7544E-2:42:6:4:2:11 0/1:36:6:5:1:16:37.5%:20:8.837E-3:49:10:7:3:18 0/0:37:4:3:1:19:21.05%:13:5.251E-2:38:15:9:6:21 0/0:38:3:2:1:11:27.27%:7:1.0714E-1:36:8:4:4:11 0/0:36:3:3:0:15:20%:11:1.1207E-1:44:12:4:8:15 0/0:38:4:4:0:10:40%:3:4.3344E-2:39:6:3:3:10 0/0:38:3:2:1:17:17.65%:14:1.1364E-1:46:14:7:7:17 0/1:37:6:5:1:15:40%:20:8.4291E-3:40:9:4:5:15 0/1:37:8:6:2:20:40%:27:1.638E-3:40:12:6:6:20 0/0:38:3:3:0:14:21.43%:9:1.1111E-1:39:11:2:9:14 0/1:37:12:8:4:21:57.14%:45:2.658E-5:41:9:5:4:21 0/1:37:6:6:0:12:50%:21:6.865E-3:41:6:2:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:8:7:1:15:53.33%:29:1.0995E-3:45:7:2:5:15 0/0:36:5:2:3:13:38.46%:4:1.9565E-2:43:8:3:5:13 0/0:38:1:1:0:8:12.5%:8:5E-1:43:7:4:3:8 0/0:37:5:5:0:15:33.33%:6:2.1073E-2:42:10:4:6:15 0/1:37:8:7:1:15:53.33%:29:1.0995E-3:40:7:3:4:15 0/1:37:9:7:2:16:56.25%:33:4.0786E-4:40:7:4:3:16 0/0:38:3:2:1:15:20%:11:1.1207E-1:46:12:5:7:16 0/1:37:7:6:1:16:43.75%:24:3.3988E-3:47:9:5:4:16 0/0:37:3:2:1:12:25%:6:1.087E-1:41:9:7:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:38:2:2:0:12:16.67%:10:2.3913E-1:43:10:6:4:12 0/1:37:11:11:0:24:45.83%:39:1.1047E-4:42:13:5:8:25 0/0:36:5:4:1:11:45.45%:3:1.7544E-2:51:6:4:2:12 0/0:37:6:4:2:22:27.27%:9:1.057E-2:41:16:7:9:22 0/0:37:4:4:0:10:40%:3:4.3344E-2:44:6:4:2:10 0/0:38:2:2:0:13:15.38%:13:2.4E-1:41:11:6:5:13 0/0:36:3:2:1:9:33.33%:4:1.0294E-1:39:6:6:0:10 0/0:35:5:1:4:16:31.25%:6:2.1691E-2:45:11:6:5:17 0/0:38:2:2:0:21:9.52%:25:2.439E-1:39:19:8:11:22 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:40:7:3:4:12 0/0:37:3:2:1:21:14.29%:19:1.1585E-1:42:18:12:6:21 0/0:37:5:4:1:13:38.46%:4:1.9565E-2:47:8:6:2:13 0/1:37:12:10:2:21:57.14%:45:2.658E-5:42:9:5:4:21 0/0:38:1:0:1:15:6.67%:21:5E-1:39:14:6:8:15 0/1:36:9:9:0:18:50%:32:5.1645E-4:39:9:5:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:6:5:1:12:50%:21:6.865E-3:40:6:2:4:12 0/0:35:4:4:0:14:28.57%:6:4.8889E-2:41:10:5:5:14 0/0:38:5:4:1:17:29.41%:8:2.2239E-2:43:12:6:6:17 0/0:37:5:5:0:17:29.41%:8:2.2239E-2:46:12:8:4:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:5:5:0:14:35.71%:4:2.037E-2:46:9:6:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:38:5:5:0:19:26.32%:10:2.3166E-2:41:14:6:8:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:8:5:3:13:61.54%:30:8.238E-4:40:5:2:3:13 0/1:37:11:8:3:28:39.29%:38:1.4422E-4:41:17:6:11:29 0/0:37:5:4:1:17:29.41%:8:2.2239E-2:37:12:4:8:17 0/0:35:3:2:1:14:21.43%:9:1.1111E-1:43:11:6:5:14 0/1:37:10:8:2:23:43.48%:35:2.8066E-4:46:13:7:6:23 0/0:36:2:2:0:14:14.29%:12:2.4074E-1:38:12:8:4:14 0/0:37:3:3:0:12:25%:6:1.087E-1:47:9:4:5:12 0/0:36:3:3:0:11:27.27%:7:1.0714E-1:36:8:1:7:12 0/1:36:11:10:1:20:55%:41:7.2653E-5:46:9:7:2:21 0/0:37:4:4:0:14:28.57%:6:4.8889E-2:39:10:6:4:14 0/0:37:4:2:2:12:33.33%:4:4.6584E-2:45:8:5:3:12 0/0:37:2:2:0:15:13.33%:16:2.4138E-1:37:13:5:8:16 0/0:38:5:4:1:12:41.67%:3:1.8634E-2:39:7:2:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:8:7:1:25:32%:26:2.0146E-3:44:17:8:9:25 0/1:38:6:4:2:18:33.33%:20:9.5308E-3:42:12:6:6:18 0/0:37:5:3:2:13:38.46%:4:1.9565E-2:45:8:4:4:13 0/0:38:2:1:1:20:10%:21:2.4359E-1:41:18:9:9:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:4:4:0:12:33.33%:4:4.6584E-2:40:8:4:4:12 0/1:36:6:6:0:10:60%:22:5.418E-3:36:4:2:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:37:8:7:1:17:47.06%:28:1.3389E-3:42:9:3:6:18 0/0:37:3:3:0:15:20%:11:1.1207E-1:41:12:6:6:15 0/0:37:4:4:0:16:25%:8:5.0612E-2:40:12:5:7:17 0/0:37:4:4:0:15:26.67%:8:4.9808E-2:42:11:6:5:15 0/1:37:7:5:2:19:36.84%:23:3.9926E-3:43:12:4:8:19 0/0:38:2:2:0:8:25%:5:2.3333E-1:40:6:5:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:2:2:0:8:25%:5:2.3333E-1:39:6:2:4:8 0/1:36:7:4:3:9:77.78%:29:1.1312E-3:35:2:1:1:10 0/1:37:9:8:1:18:50%:32:5.1645E-4:44:9:2:7:18 0/1:36:7:7:0:14:50%:25:2.8986E-3:40:7:4:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:7:5:2:15:46.67%:25:3.1609E-3:43:8:4:4:15 0/1:36:6:4:2:17:35.29%:20:9.2021E-3:39:11:5:6:17 0/0:38:2:2:0:15:13.33%:16:2.4138E-1:42:13:5:8:15 0/0:35:5:3:2:11:45.45%:3:1.7544E-2:45:6:2:4:11 0/0:36:5:1:4:18:27.78%:8:2.2727E-2:46:13:7:6:18 0/1:37:9:7:2:18:50%:32:5.1645E-4:44:9:5:4:18 0/0:37:3:3:0:15:20%:9:1.1111E-1:40:11:5:6:15 0/0:36:5:3:2:17:29.41%:8:2.2239E-2:42:12:8:4:17 0/0:38:2:0:2:17:11.76%:18:2.4242E-1:46:15:9:6:17 0/1:37:8:7:1:21:38.1%:27:1.7241E-3:37:13:8:5:21 0/0:38:5:3:2:11:45.45%:3:1.7544E-2:46:6:4:2:11 MTB_anc 335161 . A C . PASS AC=38;AF=0.167;AN=228;ANN=C|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.1150T>G|p.Ser384Ala|1150/2874|1150/2874|384/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335161A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335161A>C||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:18:0%:32:1E0:36:18:14:4:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:13:0%:25:1E0:35:13:10:3:13 0/0:0:0:0:0:8:0%:14:1E0:39:8:6:2:8 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:16 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:21:0%:40:1E0:35:21:12:9:21 0/0:0:0:0:0:12:0%:21:1E0:32:12:8:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:34:10:1:9:12 0/0:0:0:0:0:9:0%:18:1E0:35:9:6:3:11 0/0:0:0:0:0:12:0%:21:1E0:42:12:7:5:13 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:18 0/0:0:0:0:0:12:0%:21:1E0:36:12:11:1:15 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:17:0%:33:1E0:33:17:10:7:18 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:20 0/0:0:0:0:0:8:0%:14:1E0:34:8:6:2:9 0/0:0:0:0:0:10:0%:17:1E0:37:10:7:3:10 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:13 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:15 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:11 0/0:0:0:0:0:29:0%:55:1E0:36:29:16:13:33 0/0:0:0:0:0:16:0%:29:1E0:39:16:12:4:17 0/0:0:0:0:0:18:0%:32:1E0:35:18:14:4:21 0/0:0:0:0:0:17:0%:33:1E0:35:17:12:5:19 0/0:0:0:0:0:7:0%:14:1E0:35:7:6:1:10 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:11 0/0:0:0:0:0:15:0%:29:1E0:33:15:7:8:16 0/1:34:7:4:3:8:87.5%:31:6.993E-4:26:1:0:1:8 0/0:0:0:0:0:14:0%:25:1E0:35:14:9:5:16 0/0:0:0:0:0:11:0%:22:1E0:33:11:7:4:17 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:11 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:11 0/0:0:0:0:0:13:0%:25:1E0:33:13:6:7:14 0/0:0:0:0:0:10:0%:17:1E0:36:10:7:3:13 0/0:0:0:0:0:11:0%:22:1E0:34:11:8:3:11 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:9 0/0:0:0:0:0:13:0%:25:1E0:34:13:7:6:15 0/0:0:0:0:0:17:0%:33:1E0:35:17:11:6:22 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:11 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:8:0%:14:1E0:45:8:4:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:39:9:8:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:33:10:7:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:7:6:1:8:87.5%:31:6.993E-4:37:1:0:1:8 0/0:0:0:0:0:9:0%:18:1E0:37:9:6:3:12 0/0:0:0:0:0:9:0%:18:1E0:34:9:6:3:9 0/0:0:0:0:0:14:0%:25:1E0:33:14:8:6:18 0/0:0:0:0:0:18:0%:32:1E0:35:18:8:10:20 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:11 0/0:0:0:0:0:8:0%:14:1E0:34:8:5:3:10 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:10:0%:17:1E0:42:10:6:4:12 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:39:11:5:6:14 0/0:0:0:0:0:9:0%:18:1E0:38:9:6:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:35:12:9:3:13 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:15:0%:29:1E0:38:15:12:3:18 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:17 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 0/0:0:0:0:0:14:0%:25:1E0:35:14:9:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:21:1E0:34:12:6:6:17 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:14 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 0/0:0:0:0:0:18:0%:32:1E0:35:18:13:5:22 0/0:0:0:0:0:7:0%:14:1E0:38:7:5:2:13 0/0:0:0:0:0:11:0%:22:1E0:39:11:8:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:36:11:10:1:14 0/0:0:0:0:0:20:0%:36:1E0:36:20:16:4:23 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:17 0/0:0:0:0:0:14:0%:25:1E0:41:14:10:4:15 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:24 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:15 0/0:0:0:0:0:22:0%:40:1E0:35:22:13:9:24 0/0:0:0:0:0:10:0%:17:1E0:38:10:2:8:14 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:17 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:8 0/0:0:0:0:0:7:0%:14:1E0:34:7:4:3:9 0/0:0:0:0:0:16:0%:29:1E0:34:16:8:8:19 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:11 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:17:0%:33:1E0:36:17:13:4:18 0/0:0:0:0:0:13:0%:25:1E0:36:13:12:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:12:0%:21:1E0:33:12:4:8:12 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 0/0:0:0:0:0:7:0%:14:1E0:35:7:1:6:9 0/0:0:0:0:0:8:0%:14:1E0:34:8:2:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:16:0%:29:1E0:35:16:6:10:17 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:14 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:12 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:9:0%:18:1E0:40:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:13 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:14 0/0:0:0:0:0:7:0%:14:1E0:34:7:2:5:10 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:25:0%:48:1E0:34:25:12:13:27 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:10 MTB_anc 335168 . G C . PASS AC=15;AF=0.072;AN=208;ANN=C|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.1143C>G|p.Leu381Leu|1143/2874|1143/2874|381/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335168G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335168G>C||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:22:0%:40:1E0:34:22:16:6:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:35:13:10:3:13 0/0:0:0:0:0:8:0%:14:1E0:35:8:6:2:8 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:18 0/0:0:0:0:0:11:0%:22:1E0:40:11:8:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:12:0%:21:1E0:38:12:8:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:19 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:38:9:1:8:11 0/0:0:0:0:0:11:0%:22:1E0:34:11:7:4:11 0/0:0:0:0:0:13:0%:25:1E0:41:13:7:6:13 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:18 0/0:0:0:0:0:16:0%:29:1E0:34:16:13:3:16 1/1:46:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:38:8:6:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:17 0/0:0:0:0:0:16:0%:29:1E0:39:16:11:5:16 0/0:0:0:0:0:9:0%:18:1E0:37:9:6:3:9 0/0:0:0:0:0:8:0%:14:1E0:38:8:6:2:8 0/0:0:0:0:0:9:0%:18:1E0:39:9:3:6:9 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:16 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:10 0/0:0:0:0:0:30:0%:55:1E0:37:30:16:14:32 0/0:0:0:0:0:15:0%:29:1E0:39:15:12:3:16 0/0:0:0:0:0:21:0%:40:1E0:38:21:14:7:21 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:18 0/0:0:0:0:0:7:0%:14:1E0:33:7:6:1:10 0/0:0:0:0:0:10:0%:17:1E0:38:10:7:3:10 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:17 0/0:0:0:0:0:17:0%:33:1E0:33:17:11:6:18 0/0:0:0:0:0:10:0%:17:1E0:39:10:2:8:10 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:41:7:4:3:8 0/0:0:0:0:0:10:0%:17:1E0:40:10:2:8:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:11 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:13 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:12 0/0:0:0:0:0:8:0%:14:1E0:41:8:3:5:8 0/0:0:0:0:0:14:0%:25:1E0:36:14:7:7:14 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:40:8:3:5:8 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:9:0%:18:1E0:42:9:4:5:9 0/0:0:0:0:0:8:0%:14:1E0:35:8:4:4:8 0/0:0:0:0:0:10:0%:17:1E0:39:10:8:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:35:10:6:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:6:5:1:7:85.71%:26:2.331E-3:38:1:0:1:7 0/0:0:0:0:0:11:0%:22:1E0:35:11:8:3:12 0/0:0:0:0:0:8:0%:14:1E0:34:8:4:4:8 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:19 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:18 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:10 0/0:0:0:0:0:8:0%:14:1E0:35:8:5:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:42:11:5:6:11 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:14:0%:25:1E0:41:14:4:10:15 0/0:0:0:0:0:9:0%:18:1E0:38:9:6:3:9 0/0:0:0:0:0:8:0%:14:1E0:39:8:5:3:8 0/0:0:0:0:0:12:0%:21:1E0:38:12:9:3:12 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:16:0%:29:1E0:40:16:12:4:16 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:19 0/0:0:0:0:0:13:0%:25:1E0:40:13:5:8:13 0/0:0:0:0:0:13:0%:25:1E0:35:13:8:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:18:0%:33:1E0:35:17:9:8:18 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:21:0%:40:1E0:36:21:13:8:23 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:12 0/0:0:0:0:0:13:0%:25:1E0:43:13:9:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:36:16:12:4:16 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:21 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:15 0/0:0:0:0:0:16:0%:29:1E0:39:16:12:4:16 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:25 0/0:0:0:0:0:16:0%:29:1E0:35:16:8:8:16 0/0:0:0:0:0:24:0%:44:1E0:36:24:14:10:24 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:17 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:7 0/0:0:0:0:0:7:0%:14:1E0:33:7:5:2:7 0/0:0:0:0:0:19:0%:37:1E0:34:19:9:10:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:19:0%:37:1E0:35:19:14:5:19 0/0:0:0:0:0:12:0%:21:1E0:35:12:9:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:34:11:4:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:33:8:1:7:8 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:16 0/0:0:0:0:0:14:0%:25:1E0:35:14:6:8:14 0/0:0:0:0:0:11:0%:22:1E0:37:11:2:9:11 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:10:0%:17:1E0:45:10:3:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:14 0/0:0:0:0:0:14:0%:25:1E0:39:14:5:9:14 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:26:0%:47:1E0:34:26:12:14:27 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:10 MTB_anc 335172 . A AT . PASS AC=5;AF=0.026;AN=192;ANN=AT|frameshift_variant|HIGH|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.1138_1139insA|p.Leu380fs|1138/2874|1138/2874|380/957||,AT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335172_335173insT||||||,AT|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335172_335173insT||||||;LOF=(Rv0278c_Rv0278c|gene289|1|1.00);set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:22:0%:40:1E0:36:22:16:6:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:12:0%:21:1E0:37:12:10:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:17 0/0:0:0:0:0:12:0%:21:1E0:40:12:8:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:11:0%:22:1E0:39:11:7:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:37:16:11:5:18 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:15 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:37:10:1:9:13 0/0:0:0:0:0:9:0%:18:1E0:37:9:6:3:10 0/0:0:0:0:0:13:0%:25:1E0:43:13:7:6:13 0/0:0:0:0:0:16:0%:29:1E0:41:16:10:6:17 0/0:0:0:0:0:16:0%:29:1E0:37:16:13:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:40:7:6:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:17 0/0:0:0:0:0:14:0%:25:1E0:39:14:10:4:16 0/0:0:0:0:0:8:0%:14:1E0:40:8:6:2:9 0/0:0:0:0:0:8:0%:14:1E0:40:8:6:2:8 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:8 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:15 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:10 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:30 0/0:0:0:0:0:15:0%:29:1E0:40:15:12:3:16 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:17 0/0:0:0:0:0:9:0%:18:1E0:36:9:9:0:10 0/0:0:0:0:0:9:0%:18:1E0:37:9:7:2:9 0/0:0:0:0:0:14:0%:25:1E0:36:14:7:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:15:0%:29:1E0:38:15:11:4:16 0/0:0:0:0:0:17:0%:33:1E0:35:17:11:6:17 0/0:0:0:0:0:9:0%:18:1E0:39:9:2:7:10 0/0:0:0:0:0:12:0%:21:1E0:41:12:4:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:39:7:4:3:8 0/0:0:0:0:0:9:0%:18:1E0:42:9:3:6:10 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:9 0/0:0:0:0:0:12:0%:21:1E0:36:12:8:4:13 0/0:0:0:0:0:9:0%:18:1E0:36:9:8:1:11 0/0:0:0:0:0:7:0%:14:1E0:42:7:3:4:7 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:16 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:42:7:4:3:7 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:8 0/0:0:0:0:0:10:0%:17:1E0:37:10:8:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:12 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:8 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:19 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:17 0/0:0:0:0:0:9:0%:18:1E0:35:9:6:3:10 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:10:0%:17:1E0:44:10:5:5:11 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:43:11:4:7:13 0/0:0:0:0:0:8:0%:14:1E0:39:8:5:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:40:11:9:2:12 0/0:0:0:0:0:10:0%:17:1E0:41:10:6:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:14:0%:25:1E0:41:14:12:2:16 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:19 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:13 0/0:0:0:0:0:12:0%:21:1E0:37:12:7:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:16:0%:29:1E0:36:15:9:6:17 0/0:0:0:0:0:14:0%:25:1E0:36:14:7:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:18:0%:32:1E0:36:18:14:4:21 0/0:0:0:0:0:10:0%:17:1E0:39:10:5:5:12 0/0:0:0:0:0:13:0%:25:1E0:42:13:9:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:40:6:6:0:7:85.71%:26:2.331E-3:33:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:37:16:12:4:16 0/0:0:0:0:0:20:0%:36:1E0:39:20:15:5:21 0/0:0:0:0:0:13:0%:25:1E0:41:13:9:4:14 0/0:0:0:0:0:15:0%:29:1E0:40:15:12:3:16 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:16 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:23 0/0:0:0:0:0:12:0%:21:1E0:39:12:5:7:12 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:16 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:10 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:7 0/0:0:0:0:0:19:0%:37:1E0:35:19:9:10:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:19:0%:37:1E0:38:19:15:4:19 0/0:0:0:0:0:11:0%:22:1E0:39:11:9:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:14 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:14 0/0:0:0:0:0:10:0%:17:1E0:39:10:2:8:10 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:10:0%:17:1E0:46:10:3:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:14:0%:25:1E0:35:14:5:9:14 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:14 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:26 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:11 MTB_anc 335173 . GCCCA G . PASS AC=4;AF=0.021;AN=192;ANN=G|frameshift_variant|HIGH|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.1134_1137delTGGG|p.Gly379fs|1137/2874|1134/2874|378/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335174_335177delCCCA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335174_335177delCCCA||||||;HET=0;LOF=(Rv0278c_Rv0278c|gene289|1|1.00);set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:21:0%:40:1E0:36:21:15:6:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 0/0:0:0:0:0:12:0%:21:1E0:40:12:10:2:14 0/0:0:0:0:0:7:0%:14:1E0:40:7:5:2:8 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:17 0/0:0:0:0:0:11:0%:22:1E0:41:11:8:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:12:0%:21:1E0:38:12:8:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:17:0%:33:1E0:37:17:11:6:17 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:15 0/0:0:0:0:0:7:0%:14:1E0:34:7:4:3:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:37:10:1:9:13 0/0:0:0:0:0:10:0%:17:1E0:36:10:7:3:10 0/0:0:0:0:0:13:0%:25:1E0:43:13:7:6:14 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:17 0/0:0:0:0:0:16:0%:29:1E0:36:16:13:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:40:7:6:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:15:0%:29:1E0:35:15:8:7:16 0/0:0:0:0:0:16:0%:29:1E0:39:16:11:5:16 0/0:0:0:0:0:9:0%:18:1E0:39:9:6:3:9 0/0:0:0:0:0:8:0%:14:1E0:39:8:6:2:8 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:8 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:15 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:10 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:29 0/0:0:0:0:0:14:0%:25:1E0:40:14:12:2:16 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:21 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:17 0/0:0:0:0:0:9:0%:18:1E0:36:9:8:1:10 0/0:0:0:0:0:9:0%:18:1E0:37:9:7:2:9 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:15:0%:29:1E0:38:15:11:4:16 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:17 0/0:0:0:0:0:10:0%:17:1E0:38:10:2:8:10 0/0:0:0:0:0:13:0%:25:1E0:39:13:4:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:40:8:4:4:8 0/0:0:0:0:0:10:0%:17:1E0:39:10:3:7:10 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:9 0/0:0:0:0:0:12:0%:21:1E0:36:12:8:4:13 0/0:0:0:0:0:11:0%:22:1E0:36:11:8:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:16 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:38:7:4:3:7 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:8 0/0:0:0:0:0:10:0%:17:1E0:36:10:8:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:36:11:8:3:12 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:8 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:19 0/0:0:0:0:0:16:0%:29:1E0:35:16:8:8:16 0/0:0:0:0:0:9:0%:18:1E0:35:9:6:3:10 0/0:0:0:0:0:8:0%:14:1E0:37:8:5:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:10:0%:17:1E0:44:10:4:6:11 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:42:11:4:7:14 0/0:0:0:0:0:7:0%:14:1E0:38:7:4:3:8 0/0:0:0:0:0:7:0%:14:1E0:39:7:4:3:7 0/0:0:0:0:0:12:0%:21:1E0:39:12:9:3:12 0/0:0:0:0:0:12:0%:21:1E0:40:12:6:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:15:0%:29:1E0:40:15:11:4:16 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:19 0/0:0:0:0:0:12:0%:21:1E0:40:12:5:7:13 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:21:1E0:36:12:7:5:16 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:21:0%:40:1E0:36:21:14:7:21 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:13 0/0:0:0:0:0:12:0%:21:1E0:45:12:8:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:37:16:12:4:16 0/0:0:0:0:0:20:0%:36:1E0:39:20:15:5:21 0/0:0:0:0:0:12:0%:21:1E0:42:12:8:4:14 0/0:0:0:0:0:15:0%:29:1E0:40:15:12:3:16 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:15:0%:29:1E0:36:15:8:7:16 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:23 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:12 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:16 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:10 0/0:0:0:0:0:7:0%:14:1E0:37:7:5:2:7 0/0:0:0:0:0:19:0%:37:1E0:33:19:10:9:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:19:0%:37:1E0:37:19:15:4:19 0/0:0:0:0:0:11:0%:22:1E0:37:11:9:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:14 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:14 0/0:0:0:0:0:10:0%:17:1E0:38:10:2:8:10 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:38:1:0:1:10:10%:11:5E-1:46:9:3:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:14:0%:25:1E0:35:14:5:9:14 0/0:0:0:0:0:14:0%:25:1E0:39:14:5:9:14 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:24:0%:44:1E0:35:24:13:11:24 0/0:0:0:0:0:8:0%:14:1E0:39:8:4:4:10 MTB_anc 335192 . G T . PASS AC=4;AF=0.021;AN=190;ANN=T|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.1119C>A|p.Gly373Gly|1119/2874|1119/2874|373/957||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335192G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335192G>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:22:0%:40:1E0:36:22:16:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 0/0:0:0:0:0:14:0%:25:1E0:36:14:10:4:16 0/0:0:0:0:0:9:0%:18:1E0:35:9:6:3:11 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:18 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:10:0%:17:1E0:35:10:8:2:10 0/0:0:0:0:0:8:0%:14:1E0:35:8:6:2:8 0/0:0:0:0:0:14:0%:25:1E0:37:14:10:4:14 0/0:0:0:0:0:13:0%:25:1E0:33:13:8:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. 0/0:0:0:0:0:7:0%:14:1E0:40:7:6:1:7 0/0:0:0:0:0:10:0%:17:1E0:32:10:1:9:13 0/0:0:0:0:0:13:0%:25:1E0:35:13:7:6:14 0/0:0:0:0:0:12:0%:21:1E0:45:12:7:5:14 0/0:0:0:0:0:13:0%:25:1E0:34:13:7:6:15 0/0:0:0:0:0:17:0%:29:1E0:34:16:12:4:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:38:9:7:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:16:0%:29:1E0:34:16:6:10:18 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:22 0/0:0:0:0:0:9:0%:18:1E0:34:9:7:2:10 0/0:0:0:0:0:7:0%:14:1E0:39:7:6:1:9 0/0:0:0:0:0:8:0%:14:1E0:33:8:3:5:8 0/0:0:0:0:0:15:0%:29:1E0:34:15:8:7:17 0/0:0:0:0:0:11:0%:22:1E0:34:11:4:7:13 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:27 0/0:0:0:0:0:18:0%:32:1E0:39:18:13:5:18 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:25 0/0:0:0:0:0:19:0%:37:1E0:34:19:11:8:20 0/0:0:0:0:0:10:0%:17:1E0:35:10:8:2:12 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:14:0%:25:1E0:37:14:11:3:16 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:17 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:11 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:37:8:4:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:10 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:11 0/0:0:0:0:0:10:0%:17:1E0:33:10:7:3:11 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:8 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:18 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:7:0%:14:1E0:34:7:3:4:8 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:11 0/0:0:0:0:0:7:0%:14:1E0:41:7:3:4:7 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:37:7:5:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:34:10:8:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:17 0/0:0:0:0:0:9:0%:18:1E0:39:9:7:2:10 0/0:0:0:0:0:10:0%:17:1E0:34:10:7:3:10 0/0:0:0:0:0:9:0%:18:1E0:32:9:4:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:1:1:0:9:12.5%:8:5E-1:37:7:4:3:11 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:12:0%:21:1E0:40:12:4:8:16 0/0:0:0:0:0:8:0%:14:1E0:35:8:5:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:34:14:9:5:14 0/0:0:0:0:0:13:0%:25:1E0:39:13:6:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:15:0%:29:1E0:39:15:11:4:17 0/0:0:0:0:0:17:0%:33:1E0:35:17:9:8:18 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:13 0/0:0:0:0:0:9:0%:18:1E0:38:9:7:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:14 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:21:0%:40:1E0:34:21:14:7:25 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:12 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:14 0/0:0:0:0:0:15:0%:29:1E0:38:15:11:4:20 0/0:0:0:0:0:13:0%:25:1E0:39:13:8:5:15 0/0:0:0:0:0:14:0%:25:1E0:36:14:10:4:18 0/0:0:0:0:0:22:0%:40:1E0:36:21:11:10:23 0/0:0:0:0:0:14:0%:25:1E0:34:14:9:5:14 0/0:0:0:0:0:21:0%:36:1E0:37:20:12:8:21 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:8 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:20 0/0:0:0:0:0:8:0%:14:1E0:33:8:2:6:9 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:11 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:20:0%:36:1E0:35:20:17:3:21 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:38:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:9:0%:18:1E0:34:9:5:4:14 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:14 0/0:0:0:0:0:8:0%:14:1E0:40:8:1:7:10 1/1:32:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:11:0%:22:1E0:42:11:4:7:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:40:13:5:8:13 0/0:0:0:0:0:12:0%:21:1E0:40:12:5:7:14 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:22:0%:40:1E0:33:22:9:13:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 335642 . G A . PASS AC=158;AF=0.929;AN=170;ANN=A|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.669C>T|p.Ala223Ala|669/2874|669/2874|223/957||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335642G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335642G>A||||||;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:21:15:6:22:95.45%:99:1.0931E-11:35:1:0:1:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:19:13:6:21:95%:98:1.5234E-10:34:1:0:1:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. 1/1:35:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 ./. 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 0/1:33:6:3:3:7:85.71%:26:2.331E-3:34:1:0:1:9 0/1:34:8:4:4:9:88.89%:36:2.0568E-4:33:1:0:1:10 1/1:35:9:8:1:10:90%:42:5.9538E-5:29:1:0:1:13 0/1:37:11:9:2:14:78.57%:47:1.6951E-5:33:3:0:3:15 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:32:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./. 0/1:35:7:5:2:8:87.5%:31:6.993E-4:35:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:17:13:4:18:94.44%:86:2.0936E-9:38:1:0:1:18 ./. 1/1:35:9:7:2:10:90%:42:5.9538E-5:33:1:0:1:11 ./. 1/1:35:12:10:2:14:92.31%:58:1.3461E-6:36:1:0:1:15 ./. 0/1:38:11:10:1:15:73.33%:46:2.4988E-5:33:4:0:4:17 1/1:36:9:6:3:10:90%:42:5.9538E-5:33:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:35:10:5:5:12:83.33%:44:3.3652E-5:33:2:0:2:16 0/1:38:9:8:1:11:81.82%:39:1.1057E-4:34:2:0:2:15 1/1:37:12:10:2:13:92.31%:58:1.3461E-6:34:1:0:1:13 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 ./. 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. 1/1:35:9:8:1:10:90%:42:5.9538E-5:33:1:0:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:17:15:2:18:94.44%:86:2.0936E-9:32:1:0:1:20 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:17 0/1:36:8:6:2:9:88.89%:36:2.0568E-4:34:1:0:1:12 1/1:34:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./. 1/1:35:15:13:2:16:93.75%:75:2.8282E-8:29:1:0:1:18 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:11 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 0/1:36:7:2:5:8:87.5%:31:6.993E-4:32:1:0:1:10 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:37:6:3:3:7:85.71%:26:2.331E-3:35:1:0:1:8 1/1:34:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:10 ./. 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 0/1:36:10:8:2:12:83.33%:44:3.3652E-5:35:2:0:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:33:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:30:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:18:14:4:19:94.74%:92:5.6585E-10:33:1:0:1:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 1/1:34:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:9:7:2:10:90%:42:5.9538E-5:35:1:0:1:11 1/1:34:19:16:3:20:95%:98:1.5234E-10:29:1:0:1:26 ./. ./. 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:37:15:12:3:16:93.75%:75:2.8282E-8:33:1:0:1:17 1/1:33:18:12:6:19:94.74%:92:5.6585E-10:33:1:0:1:20 1/1:35:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:28:22:6:30:93.33%:99:4.194E-15:31:2:0:2:31 1/1:32:13:9:4:14:92.86%:64:3.7391E-7:33:1:0:1:14 1/1:37:24:18:6:26:96%:99:2.0568E-13:34:1:0:1:34 1/1:35:13:10:3:14:92.86%:64:3.7391E-7:33:1:0:1:20 1/1:35:16:15:1:17:94.12%:81:7.7134E-9:34:1:0:1:21 1/1:36:14:12:2:15:93.33%:69:1.0315E-7:33:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 ./. 1/1:36:18:15:3:19:94.74%:92:5.6585E-10:35:1:0:1:20 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./. 1/1:37:15:13:2:16:93.75%:75:2.8282E-8:35:1:0:1:17 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 0/1:33:6:5:1:7:85.71%:26:2.331E-3:33:1:0:1:10 1/1:37:15:13:2:16:93.75%:75:2.8282E-8:32:1:0:1:18 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 335685 . CCGCCGCCGGCGCCGCCGG C . PASS AC=1;AF=5.319e-03;AN=188;ANN=C|disruptive_inframe_deletion|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.608_625delCCGGCGGCGCCGGCGGCG|p.Ala203_Gly208del|625/2874|608/2874|203/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335686_335703delCGCCGCCGGCGCCGCCGG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335686_335703delCGCCGCCGGCGCCGCCGG||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:28:0%:51:1E0:37:28:20:8:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:18:0%:32:1E0:40:18:13:5:19 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:7 ./. ./. 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:11 0/0:0:0:0:0:8:0%:14:1E0:35:8:7:1:9 0/0:0:0:0:0:7:0%:14:1E0:39:7:5:2:7 0/0:0:0:0:0:8:0%:14:1E0:39:8:4:4:8 ./. 0/0:0:0:0:0:18:0%:32:1E0:37:18:12:6:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:1:1:0:18:5.56%:24:5E-1:36:17:7:10:18 0/0:0:0:0:0:13:0%:25:1E0:35:13:9:4:13 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:11 0/0:33:1:1:0:12:8.33%:14:5E-1:38:11:9:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 0/0:0:0:0:0:10:0%:17:1E0:37:10:9:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:19:0%:37:1E0:36:19:15:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:10 0/0:38:2:2:0:18:11.11%:18:2.4286E-1:37:16:13:3:20 ./. 0/0:0:0:0:0:10:0%:17:1E0:36:10:8:2:10 ./. 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:18 ./. 0/0:0:0:0:0:18:0%:32:1E0:37:18:13:5:18 0/0:33:1:1:0:10:10%:11:5E-1:38:9:6:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:31:1:1:0:27:3.7%:41:5E-1:37:26:17:9:29 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:42:8:5:3:10 0/0:0:0:0:0:13:0%:25:1E0:34:13:8:5:13 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:17 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:21 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:17 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:15 ./. 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:17 0/0:0:0:0:0:19:0%:37:1E0:35:19:12:7:20 0/0:0:0:0:0:28:0%:51:1E0:38:28:20:8:29 0/0:37:1:1:0:21:4.76%:31:5E-1:37:20:13:7:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 0/0:0:0:0:0:12:0%:21:1E0:36:12:8:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:19:0%:37:1E0:39:19:16:3:20 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:24 0/0:38:1:1:0:13:7.69%:18:5E-1:38:12:7:5:15 0/0:0:0:0:0:20:0%:36:1E0:36:20:15:5:20 0/0:0:0:0:0:20:0%:36:1E0:39:20:17:3:20 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:12 ./. 0/0:0:0:0:0:19:0%:37:1E0:37:19:15:4:19 0/0:0:0:0:0:15:0%:29:1E0:37:15:12:3:15 ./. ./. ./. ./. ./. 0/0:0:0:0:0:12:0%:21:1E0:36:12:11:1:12 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 0/0:0:0:0:0:16:0%:29:1E0:37:16:14:2:16 0/0:0:0:0:0:10:0%:17:1E0:43:10:6:4:10 0/0:0:0:0:0:22:0%:40:1E0:36:22:16:6:22 0/0:0:0:0:0:12:0%:21:1E0:40:12:11:1:12 0/0:0:0:0:0:13:0%:25:1E0:39:13:9:4:13 ./. 0/0:0:0:0:0:17:0%:33:1E0:38:17:12:5:17 0/0:0:0:0:0:11:0%:22:1E0:36:11:8:3:11 ./. 0/0:0:0:0:0:11:0%:22:1E0:38:11:8:3:11 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 0/0:0:0:0:0:11:0%:22:1E0:40:11:6:5:12 0/0:0:0:0:0:28:0%:51:1E0:38:28:21:7:28 0/0:0:0:0:0:8:0%:14:1E0:37:8:5:3:8 0/0:0:0:0:0:33:0%:63:1E0:36:33:22:11:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 0/0:0:0:0:0:14:0%:25:1E0:36:14:6:8:14 0/0:0:0:0:0:16:0%:29:1E0:36:16:12:4:16 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 0/0:0:0:0:0:10:0%:17:1E0:36:10:7:3:11 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:7 0/0:0:0:0:0:12:0%:21:1E0:42:12:8:4:13 0/0:0:0:0:0:22:0%:40:1E0:39:22:18:4:23 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:16 0/0:0:0:0:0:26:0%:47:1E0:37:26:17:9:26 0/0:0:0:0:0:31:0%:59:1E0:37:31:22:9:32 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:35 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:13 0/0:0:0:0:0:31:0%:59:1E0:36:31:20:11:31 0/0:0:0:0:0:21:0%:40:1E0:34:21:14:7:21 0/0:0:0:0:0:21:0%:40:1E0:34:21:20:1:21 0/0:0:0:0:0:21:0%:40:1E0:36:21:15:6:21 ./. 0/0:0:0:0:0:17:0%:33:1E0:34:17:9:8:18 0/0:0:0:0:0:21:0%:40:1E0:35:21:15:6:21 ./. 0/0:0:0:0:0:22:0%:40:1E0:37:22:16:6:22 0/0:0:0:0:0:13:0%:25:1E0:37:13:10:3:13 ./. 0/0:38:1:1:0:19:5.26%:28:5E-1:37:18:16:2:19 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:15 0/0:0:0:0:0:11:0%:22:1E0:33:11:6:5:11 0/0:37:1:1:0:14:7.14%:17:5E-1:38:13:10:3:14 0/0:0:0:0:0:11:0%:22:1E0:37:11:10:1:11 0/0:0:0:0:0:14:0%:25:1E0:39:14:12:2:14 0/0:0:0:0:0:17:0%:33:1E0:35:17:11:6:17 ./. 0/0:0:0:0:0:14:0%:25:1E0:35:14:11:3:14 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:40:14:11:3:16:87.5%:65:2.5454E-7:38:2:0:2:16 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:11 ./. ./. 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:14 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:17 0/0:38:1:1:0:7:14.29%:8:5E-1:35:6:4:2:7 ./. ./. 0/0:0:0:0:0:13:0%:25:1E0:36:13:10:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 335704 . C A . PASS AC=26;AF=0.123;AN=212;ANN=A|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.607G>T|p.Ala203Ser|607/2874|607/2874|203/957||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335704C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335704C>A||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:31:0%:59:1E0:36:31:22:9:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:19:0%:37:1E0:40:19:14:5:20 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:37:10:7:3:10 0/0:0:0:0:0:9:0%:18:1E0:36:9:8:1:9 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:7 0/0:0:0:0:0:8:0%:14:1E0:34:8:5:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:18:0%:32:1E0:37:18:13:5:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:18 0/0:0:0:0:0:14:0%:25:1E0:35:14:9:5:14 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:8 0/0:0:0:0:0:11:0%:22:1E0:38:11:10:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 0/0:0:0:0:0:11:0%:22:1E0:35:11:9:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:18:0%:32:1E0:38:18:15:3:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:11 0/0:0:0:0:0:21:0%:40:1E0:35:21:18:3:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:11:0%:22:1E0:35:11:9:2:11 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:17:0%:33:1E0:36:17:11:6:17 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:20:0%:36:1E0:36:20:15:5:20 0/0:0:0:0:0:11:0%:22:1E0:37:11:9:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:27 0/0:0:0:0:0:19:0%:37:1E0:37:19:12:7:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:9:0%:18:1E0:39:9:7:2:11 0/0:0:0:0:0:13:0%:25:1E0:35:13:10:3:14 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:17 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:23 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:13 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:17 0/0:0:0:0:0:28:0%:51:1E0:37:28:23:5:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:11:0%:22:1E0:36:11:8:3:11 ./. 0/0:0:0:0:0:20:0%:36:1E0:36:20:17:3:20 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:23 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:16 0/0:0:0:0:0:18:0%:32:1E0:36:18:15:3:18 0/0:0:0:0:0:18:0%:32:1E0:39:18:15:3:19 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:17:0%:33:1E0:38:17:14:3:17 0/0:0:0:0:0:17:0%:33:1E0:36:17:14:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:36:11:11:0:11 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:12:0%:21:1E0:36:12:9:3:12 0/0:0:0:0:0:18:0%:32:1E0:37:18:16:2:20 0/0:0:0:0:0:9:0%:18:1E0:40:9:6:3:9 0/0:0:0:0:0:24:0%:44:1E0:36:24:19:5:24 0/0:0:0:0:0:12:0%:21:1E0:40:12:10:2:12 0/0:0:0:0:0:14:0%:25:1E0:37:14:9:5:14 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 0/0:0:0:0:0:16:0%:29:1E0:35:16:12:4:16 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:12 0/0:0:0:0:0:15:0%:29:1E0:38:15:10:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:36:12:8:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:42:8:5:3:9 0/0:0:0:0:0:27:0%:52:1E0:37:27:20:7:27 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 0/0:0:0:0:0:34:0%:62:1E0:36:34:23:11:35 0/0:0:0:0:0:7:0%:14:1E0:39:7:6:1:7 0/0:0:0:0:0:9:0%:18:1E0:32:9:7:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:36:11:6:5:11 0/0:0:0:0:0:18:0%:32:1E0:36:18:14:4:19 0/0:0:0:0:0:31:0%:59:1E0:36:31:20:11:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 0/0:0:0:0:0:9:0%:18:1E0:34:9:8:1:9 0/0:0:0:0:0:7:0%:14:1E0:39:7:3:4:7 0/0:0:0:0:0:11:0%:22:1E0:43:11:7:4:12 0/0:0:0:0:0:27:0%:52:1E0:38:27:23:4:28 0/0:0:0:0:0:17:0%:33:1E0:37:17:14:3:17 0/0:0:0:0:0:21:0%:40:1E0:36:21:14:7:21 0/0:0:0:0:0:30:0%:55:1E0:37:30:24:6:30 0/0:0:0:0:0:34:0%:62:1E0:36:34:23:11:34 0/0:0:0:0:0:13:0%:25:1E0:35:13:9:4:14 0/0:0:0:0:0:34:0%:62:1E0:36:34:24:10:34 0/0:0:0:0:0:24:0%:44:1E0:35:24:18:6:26 0/0:0:0:0:0:24:0%:44:1E0:34:24:21:3:24 0/0:0:0:0:0:20:0%:36:1E0:35:20:15:5:20 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:16 0/0:0:0:0:0:19:0%:37:1E0:34:19:15:4:19 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 0/0:0:0:0:0:24:0%:44:1E0:36:24:19:5:24 0/0:0:0:0:0:12:0%:21:1E0:39:12:10:2:14 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:18:0%:32:1E0:37:18:16:2:18 0/0:0:0:0:0:18:0%:32:1E0:35:18:14:4:19 0/0:0:0:0:0:12:0%:21:1E0:35:12:8:4:12 0/0:0:0:0:0:14:0%:25:1E0:37:14:11:3:14 0/0:0:0:0:0:15:0%:29:1E0:37:15:14:1:15 0/0:0:0:0:0:14:0%:25:1E0:35:14:13:1:15 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:12:0%:21:1E0:33:12:11:1:14 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:17:0%:33:1E0:39:17:14:3:17 0/0:0:0:0:0:10:0%:17:1E0:38:10:6:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:12:0%:21:1E0:36:12:9:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:36:12:10:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 335803 . G C . PASS AC=272;AF=1.00;AN=272;ANN=C|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.508C>G|p.Arg170Gly|508/2874|508/2874|170/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335803G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335803G>C||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:26:23:3:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:13:11:2:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:24:21:3:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:34:28:6:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:25:23:2:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:28:24:4:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:24:23:1:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:12:8:4:13:92.31%:64:3.698E-7:0:0:0:0:14 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 MTB_anc 335810 . CCCGCCGGCGCCGCCGTTG C . PASS AC=164;AF=0.636;AN=258;ANN=C|disruptive_inframe_deletion|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.483_500delCAACGGCGGCGCCGGCGG|p.Asn162_Gly167del|500/2874|483/2874|161/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335811_335828delCCGCCGGCGCCGCCGTTG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335811_335828delCCGCCGGCGCCGCCGTTG||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:20:14:6:29:68.97%:82:5.4216E-9:37:9:8:1:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:38:15:10:5:19:78.95%:66:2.5053E-7:34:4:3:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:11:7:4:12:91.67%:53:4.8074E-6:33:1:1:0:12 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:38:8:8:0:10:80%:34:3.5723E-4:35:2:2:0:10 1/1:38:9:6:3:10:90%:42:5.9538E-5:34:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:20:11:9:23:86.96%:95:3.1579E-10:37:3:1:2:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:9:7:2:11:75%:37:1.6826E-4:32:3:2:1:12 0/1:37:7:4:3:11:63.64%:27:1.935E-3:36:4:4:0:11 1/1:32:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:38:9:8:1:12:75%:39:1.1057E-4:37:2:2:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:9:6:3:14:64.29%:35:2.8986E-4:36:5:5:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:39:15:8:7:21:71.43%:62:5.4994E-7:35:6:6:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:9:6:3:12:75%:37:1.6826E-4:34:3:2:1:12 0/1:38:13:12:1:19:68.42%:53:5.0106E-6:36:6:5:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:5:2:10:70%:28:1.548E-3:37:3:3:0:10 1/1:37:13:8:5:14:92.86%:64:3.7391E-7:37:1:1:0:14 0/1:38:10:10:0:12:83.33%:44:3.3652E-5:33:2:2:0:12 0/1:36:11:9:2:13:84.62%:49:1.0096E-5:37:2:2:0:13 0/1:37:12:7:5:15:80%:52:5.2605E-6:37:3:2:1:15 0/1:38:6:5:1:9:66.67%:23:4.5249E-3:44:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:38:9:3:6:11:81.82%:39:1.1057E-4:37:2:1:1:11 0/1:37:18:11:7:24:75%:77:1.8413E-8:36:6:4:2:24 0/1:38:17:14:3:20:85%:78:1.2848E-8:37:3:2:1:20 1/1:38:11:7:4:12:91.67%:53:4.8074E-6:34:1:1:0:12 1/1:36:14:9:5:13:100%:76:2.4927E-8:0:0:0:0:14 0/1:37:19:17:2:24:79.17%:84:3.6826E-9:41:5:3:2:25 0/1:37:14:11:3:17:82.35%:63:4.8851E-7:44:3:2:1:17 0/1:37:13:11:2:19:68.42%:53:5.0106E-6:35:6:5:1:19 0/1:38:9:7:2:12:81.82%:39:1.1057E-4:37:2:2:0:13 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 0/1:37:16:9:7:18:88.89%:76:2.0936E-8:35:2:2:0:18 0/1:38:17:11:6:20:85%:78:1.2848E-8:36:3:3:0:20 0/1:35:17:11:6:23:70.83%:70:8.1543E-8:37:7:6:1:24 0/1:37:16:12:4:20:80%:71:7.7086E-8:36:4:4:0:20 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:13:10:3:18:72.22%:54:3.7078E-6:36:5:5:0:18 1/1:38:12:9:3:13:92.31%:58:1.3461E-6:33:1:1:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:13:10:3:14:92.86%:64:3.7391E-7:37:1:1:0:14 1/1:37:14:11:3:15:93.33%:69:1.0315E-7:36:1:1:0:15 0/1:37:12:10:2:16:75%:50:8.0605E-6:36:4:3:1:17 0/1:37:11:9:2:15:73.33%:46:2.4988E-5:37:4:4:0:15 0/1:37:12:6:6:18:66.67%:48:1.4831E-5:38:6:6:0:18 0/1:35:8:6:2:8:88.89%:36:2.0568E-4:37:1:1:0:9 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:37:13:10:3:16:81.25%:57:1.6121E-6:37:3:3:0:16 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:14:8:6:15:93.33%:69:1.0315E-7:34:1:0:1:16 0/1:38:21:15:6:24:87.5%:99:9.0704E-11:37:3:3:0:24 0/1:37:7:5:2:9:77.78%:29:1.1312E-3:34:2:1:1:9 1/1:37:14:7:7:15:93.33%:69:1.0315E-7:36:1:1:0:15 0/1:37:8:6:2:11:72.73%:32:5.16E-4:37:3:3:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:5:4:8:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:11:10:1:12:91.67%:53:4.8074E-6:34:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:12:4:8:14:85.71%:55:2.9913E-6:35:2:2:0:14 1/1:37:18:12:6:20:90%:87:1.6758E-9:38:2:2:0:20 0/1:37:16:13:3:19:84.21%:73:4.357E-8:36:3:3:0:19 0/1:37:18:13:5:24:75%:77:1.8413E-8:36:6:4:2:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:18:16:2:21:85.71%:84:3.7603E-9:33:3:3:0:21 0/1:38:16:12:4:18:88.89%:76:2.0936E-8:37:2:2:0:18 0/1:37:15:12:3:19:78.95%:66:2.5053E-7:37:4:3:1:19 1/1:36:20:13:7:21:90.91%:98:1.3117E-10:35:2:2:0:22 0/1:36:12:8:4:15:80%:52:5.2605E-6:36:3:1:2:16 0/1:37:15:8:7:19:78.95%:68:1.4655E-7:34:3:2:1:19 0/1:37:15:11:4:17:88.24%:71:7.3277E-8:29:2:1:1:17 0/1:33:6:4:2:7:75%:24:3.4965E-3:35:2:2:0:8 0/1:40:10:7:3:13:76.92%:42:5.3843E-5:34:3:2:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:16:9:7:18:88.89%:76:2.0936E-8:37:2:2:0:18 1/1:35:10:6:4:10:90.91%:47:1.7011E-5:37:1:1:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:12:9:3:18:66.67%:48:1.4831E-5:36:6:5:1:19 0/1:39:10:6:4:14:71.43%:41:7.6278E-5:37:4:2:2:14 0/1:36:18:15:3:22:78.26%:79:1.1937E-8:36:5:3:2:25 1/1:38:10:7:3:11:90.91%:47:1.7011E-5:37:1:1:0:11 0/1:36:15:14:1:17:88.24%:71:7.3277E-8:35:2:2:0:17 1/1:37:12:9:3:13:92.31%:58:1.3461E-6:24:1:1:0:13 1/1:34:10:6:4:9:100%:52:5.4125E-6:0:0:0:0:10 0/1:37:13:7:6:16:81.25%:57:1.6121E-6:35:3:3:0:16 0/1:37:14:10:4:18:77.78%:60:8.0605E-7:37:4:2:2:19 0/1:37:21:19:2:25:84%:97:1.8789E-10:36:4:3:1:25 0/1:34:6:6:0:7:75%:24:3.4965E-3:36:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:11:9:2:13:84.62%:49:1.0096E-5:38:2:2:0:13 0/1:38:8:5:3:12:66.67%:31:6.7304E-4:36:4:2:2:12 0/1:37:9:6:3:14:64.29%:35:2.8986E-4:35:5:3:2:15 0/1:37:29:23:6:35:82.86%:99:4.008E-14:35:6:5:1:35 0/1:36:17:13:4:20:80.95%:76:2.3502E-8:36:4:4:0:21 0/1:38:17:14:3:21:80.95%:76:2.3502E-8:33:4:1:3:21 0/1:37:19:16:3:26:73.08%:80:8.6144E-9:34:7:7:0:26 0/1:37:19:15:4:22:86.36%:89:1.0931E-9:35:3:3:0:22 0/1:38:12:8:4:16:75%:50:8.0605E-6:31:4:3:1:16 0/1:38:22:18:4:25:88%:99:2.5916E-11:35:3:3:0:27 0/1:34:13:11:2:17:72.22%:54:3.7078E-6:36:5:4:1:19 0/1:38:13:12:1:20:65%:51:6.4422E-6:37:7:5:2:20 0/1:37:14:11:3:18:77.78%:60:8.0605E-7:35:4:3:1:20 0/1:37:17:12:5:19:89.47%:82:5.9414E-9:37:2:2:0:20 0/1:38:7:7:0:11:63.64%:27:1.935E-3:35:4:4:0:12 0/1:39:19:12:7:24:79.17%:84:3.6826E-9:34:5:3:2:24 1/1:38:14:9:5:15:93.33%:69:1.0315E-7:36:1:1:0:15 0/1:37:19:15:4:22:86.36%:89:1.0931E-9:33:3:3:0:22 0/1:35:15:11:4:16:88.24%:71:7.3277E-8:37:2:2:0:17 1/1:37:21:18:3:22:95.45%:99:1.0931E-11:37:1:1:0:22 0/1:39:11:9:2:15:73.33%:46:2.4988E-5:35:4:3:1:15 0/1:37:16:12:4:19:84.21%:73:4.357E-8:35:3:3:0:19 0/1:37:8:8:0:13:61.54%:30:8.238E-4:32:5:4:1:14 0/1:38:8:5:3:12:66.67%:31:6.7304E-4:37:4:3:1:12 0/1:37:20:19:1:23:86.96%:95:3.1579E-10:37:3:2:1:24 0/1:38:12:9:3:15:80%:52:5.2605E-6:36:3:2:1:15 0/0:38:5:2:3:12:41.67%:3:1.8634E-2:34:7:7:0:12 0/1:34:11:9:2:12:78.57%:47:1.6951E-5:33:3:3:0:14 0/1:37:10:8:2:13:76.92%:42:5.3843E-5:34:3:3:0:14 1/1:38:11:9:2:12:91.67%:53:4.8074E-6:37:1:1:0:12 0/1:37:16:14:2:18:88.89%:76:2.0936E-8:37:2:1:1:18 0/1:36:12:10:2:13:85.71%:55:2.9913E-6:32:2:2:0:14 0/1:38:9:8:1:11:81.82%:39:1.1057E-4:35:2:2:0:11 0/1:38:9:8:1:11:81.82%:39:1.1057E-4:37:2:2:0:11 0/1:38:10:8:2:13:76.92%:42:5.3843E-5:36:3:3:0:13 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:36:11:8:3:13:78.57%:47:1.6951E-5:36:3:0:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:37:12:9:3:13:92.31%:58:1.3461E-6:38:1:0:1:13 0/1:38:11:8:3:13:84.62%:49:1.0096E-5:37:2:1:1:13 0/1:38:15:9:6:17:88.24%:71:7.3277E-8:37:2:1:1:17 1/1:39:12:6:6:13:92.31%:58:1.3461E-6:37:1:1:0:13 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:11:3:15:93.33%:69:1.0315E-7:37:1:1:0:15 0/1:35:11:9:2:13:78.57%:47:1.6951E-5:31:3:3:0:14 0/1:38:6:4:2:9:66.67%:23:4.5249E-3:31:3:3:0:9 MTB_anc 335828 . G GCCGATGAGC . PASS AC=1;AF=0.500;AN=2;ANN=GCCGATGAGC|disruptive_inframe_insertion|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.482_483insGCTCATCGG|p.Gly161_Asn162insLeuIleGly|482/2874|482/2874|161/957||,GCCGATGAGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335828_335829insCCGATGAGC||||||,GCCGATGAGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335828_335829insCCGATGAGC||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 0/1:35:5:4:1:10:83.33%:21:7.5758E-3:37:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 MTB_anc 335885 . T G . PASS AC=6;AF=0.020;AN=294;ANN=G|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.426A>C|p.Gly142Gly|426/2874|426/2874|142/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335885T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335885T>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:34:3:1:2:44:6.82%:53:1.2069E-1:37:41:26:15:46 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:42:4:4:0:30:13.33%:26:5.62E-2:37:26:12:14:33 0/0:60:1:0:1:10:10%:11:5E-1:34:9:3:6:10 0/0:33:2:1:1:19:10.53%:21:2.4324E-1:37:17:14:3:20 0/0:37:1:0:1:17:5.88%:24:5E-1:37:16:10:6:17 0/0:39:1:0:1:23:4.35%:34:5E-1:38:22:13:9:23 0/0:24:1:0:1:15:6.67%:21:5E-1:36:14:9:5:16 0/0:40:4:0:4:25:16%:21:5.4928E-2:37:21:15:6:26 0/0:37:1:0:1:21:4.76%:31:5E-1:37:20:9:11:24 0/0:34:1:0:1:16:6.25%:21:5E-1:37:15:11:4:18 0/0:37:5:2:3:39:12.82%:35:2.7273E-2:37:34:16:18:41 0/0:37:1:0:1:10:10%:11:5E-1:36:9:5:4:10 0/0:30:2:0:2:23:8.7%:28:2.4444E-1:37:21:16:5:26 0/0:41:4:1:3:27:14.81%:23:5.5494E-2:37:23:11:12:27 0/0:37:5:2:3:15:33.33%:6:2.1073E-2:36:10:6:4:16 0/0:31:1:0:1:15:6.67%:21:5E-1:36:14:11:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:1:0:9:11.11%:11:5E-1:36:8:7:1:10 0/0:43:3:1:2:19:15.79%:17:1.1486E-1:37:16:10:6:19 0/0:36:3:1:2:16:18.75%:11:1.129E-1:37:13:7:6:16 0/0:36:4:1:3:38:10.53%:37:5.7534E-2:37:34:16:18:38 0/0:49:2:1:1:14:14.29%:12:2.4074E-1:38:12:8:4:14 0/0:38:2:0:2:23:8.7%:28:2.4444E-1:39:21:11:10:23 0/0:40:4:2:2:37:10.81%:38:5.7399E-2:37:33:23:10:38 0/0:38:4:3:1:21:19.05%:15:5.3471E-2:37:17:11:6:22 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:19 0/0:37:2:2:0:18:11.11%:18:2.4286E-1:37:16:8:8:18 0/0:34:6:2:4:26:23.08%:13:1.1309E-2:37:20:18:2:26 0/0:39:1:1:0:24:4.17%:34:5E-1:37:23:15:8:24 0/0:37:2:1:1:27:7.41%:34:2.4528E-1:37:25:15:10:28 0/0:32:4:1:3:19:21.05%:13:5.251E-2:37:15:12:3:19 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:13 0/0:49:2:2:0:20:10%:21:2.4359E-1:37:18:12:6:21 0/0:37:1:0:1:19:5.26%:28:5E-1:37:18:10:8:19 0/0:34:5:2:3:42:11.9%:38:2.7555E-2:38:37:21:16:44 0/0:37:5:1:4:42:11.9%:38:2.7555E-2:37:37:24:13:42 0/0:37:3:2:1:36:8.33%:40:1.1972E-1:37:33:20:13:37 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:37:27:15:12:30 0/0:38:4:2:2:37:10.81%:38:5.7399E-2:37:33:26:7:38 0/0:35:4:2:2:27:14.81%:23:5.5494E-2:37:23:14:9:27 0/0:33:4:1:3:33:12.12%:32:5.6777E-2:37:29:18:11:34 0/0:48:2:0:2:23:8.7%:28:2.4444E-1:36:21:14:7:23 0/0:25:1:0:1:20:5%:27:5E-1:38:19:9:10:23 0/0:34:2:1:1:23:8.7%:28:2.4444E-1:37:21:14:7:25 0/0:48:2:1:1:36:5.56%:47:2.4648E-1:37:34:19:15:37 0/0:31:2:1:1:30:6.67%:37:2.4576E-1:37:28:18:10:30 0/0:35:5:1:4:39:12.82%:35:2.7273E-2:37:34:21:13:41 0/0:34:5:0:5:37:13.51%:32:2.706E-2:36:32:20:12:38 0/0:36:3:2:1:28:10.71%:28:1.1818E-1:38:25:15:10:28 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:11 0/0:35:2:1:1:47:4.26%:67:2.4731E-1:37:45:29:16:48 0/0:28:1:0:1:23:4.35%:34:5E-1:38:22:16:6:24 0/0:32:2:1:1:17:11.76%:18:2.4242E-1:37:15:10:5:17 0/0:38:2:0:2:25:8%:31:2.449E-1:36:23:17:6:29 0/0:28:1:0:1:33:3.03%:52:5E-1:38:32:21:11:36 0/0:38:2:1:1:34:5.88%:43:2.4627E-1:38:32:22:10:34 0/0:28:1:0:1:18:5.56%:24:5E-1:36:17:7:10:19 0/0:36:6:1:5:41:14.63%:33:1.2841E-2:36:35:17:18:42 0/0:32:4:1:3:29:13.79%:26:5.5981E-2:37:25:16:9:30 0/0:28:3:0:3:19:15.79%:17:1.1486E-1:37:16:12:4:19 0/0:33:5:1:4:32:15.62%:24:2.6412E-2:36:27:16:11:33 0/0:36:3:1:2:31:9.68%:34:1.1885E-1:37:28:18:10:31 0/0:36:1:1:0:18:5.56%:24:5E-1:37:17:13:4:18 0/0:35:6:1:5:29:20.69%:18:1.1736E-2:38:23:14:9:29 0/0:36:5:2:3:40:12.5%:35:2.7371E-2:36:35:21:14:40 0/0:37:5:2:3:25:20%:17:2.5076E-2:37:20:14:6:25 0/1:43:7:3:4:38:18.42%:22:5.7727E-3:38:31:13:18:38 0/0:44:3:1:2:23:13.04%:22:1.1667E-1:35:20:10:10:23 0/0:0:0:0:0:12:0%:21:1E0:37:12:7:5:12 0/0:37:1:0:1:21:4.76%:31:5E-1:36:20:11:9:21 0/0:37:3:2:1:26:11.54%:25:1.1765E-1:37:23:17:6:28 0/0:0:0:0:0:9:0%:18:1E0:36:9:5:4:9 0/0:48:2:1:1:22:9.09%:24:2.4419E-1:39:20:8:12:23 0/0:34:5:0:5:40:12.5%:35:2.7371E-2:37:35:27:8:40 0/0:33:4:2:2:27:14.81%:23:5.5494E-2:38:23:18:5:28 0/0:38:2:2:0:38:5.26%:50:2.4667E-1:37:36:21:15:40 0/0:38:1:1:0:18:5.56%:24:5E-1:37:17:7:10:18 0/0:35:2:1:1:28:7.14%:34:2.4545E-1:37:26:18:8:30 0/0:34:6:3:3:29:20.69%:18:1.1736E-2:37:23:17:6:29 0/0:36:5:2:3:30:16.67%:21:2.6093E-2:36:25:17:8:34 0/0:33:4:1:3:39:10.26%:41:5.7662E-2:37:35:22:13:39 0/0:34:5:2:3:26:19.23%:17:2.531E-2:37:21:12:9:28 0/0:38:1:0:1:28:3.57%:41:5E-1:39:27:16:11:29 0/0:33:1:0:1:17:5.88%:24:5E-1:36:16:12:4:17 0/0:38:3:2:1:22:13.64%:19:1.1628E-1:38:19:13:6:22 0/0:38:3:2:1:22:13.64%:19:1.1628E-1:38:19:13:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:34:1:0:1:26:3.85%:38:5E-1:37:25:15:10:27 0/0:39:1:1:0:18:5.56%:24:5E-1:38:17:10:7:19 0/1:41:7:2:5:16:43.75%:24:3.3988E-3:37:9:5:4:16 0/0:0:0:0:0:16:0%:29:1E0:36:16:14:2:16 0/0:35:5:3:2:27:18.52%:19:2.5527E-2:37:22:17:5:28 0/0:40:5:0:5:29:17.24%:22:2.5917E-2:39:24:11:13:30 0/0:35:5:3:2:32:15.62%:24:2.6412E-2:36:27:16:11:34 0/0:47:2:1:1:22:9.09%:24:2.4419E-1:37:20:12:8:23 0/0:37:3:1:2:30:10%:31:1.1864E-1:36:27:19:8:30 0/0:28:1:0:1:24:4.17%:34:5E-1:37:23:17:6:24 0/1:33:7:2:5:26:26.92%:23:4.9169E-3:38:19:11:8:27 0/1:34:7:2:5:33:21.21%:22:5.4855E-3:36:26:15:11:34 0/0:31:5:0:5:34:14.71%:27:2.6693E-2:36:29:19:10:34 0/0:35:4:1:3:41:9.76%:44:5.79E-2:37:37:25:12:44 0/0:35:3:2:1:20:15%:16:1.1538E-1:37:17:11:6:20 0/0:34:2:0:2:25:8%:31:2.449E-1:37:23:16:7:25 0/0:34:5:2:3:24:20.83%:14:2.4823E-2:36:19:12:7:25 0/0:32:5:1:4:29:17.24%:22:2.5917E-2:37:24:16:8:29 0/0:41:3:2:1:33:9.09%:37:1.1923E-1:37:30:17:13:34 0/0:38:3:2:1:42:7.14%:49:1.2048E-1:36:39:29:10:43 0/0:31:4:2:2:35:11.43%:31:5.6946E-2:39:30:22:8:37 0/0:36:6:1:5:43:13.95%:36:1.2967E-2:36:37:25:12:44 0/0:37:6:2:4:35:17.14%:25:1.238E-2:36:29:21:8:36 0/0:33:4:0:4:35:11.43%:35:5.7106E-2:36:31:18:13:37 0/0:33:4:2:2:25:16%:21:5.4928E-2:37:21:15:6:25 0/0:31:2:0:2:47:4.26%:67:2.4731E-1:37:45:29:16:47 0/0:34:2:1:1:27:7.41%:34:2.4528E-1:37:25:17:8:29 0/0:32:6:3:3:32:18.75%:20:1.2087E-2:36:26:23:3:35 0/0:33:1:0:1:25:4%:38:5E-1:37:24:17:7:26 0/0:36:4:2:2:28:14.29%:23:5.5746E-2:36:24:13:11:28 0/0:30:2:1:1:16:12.5%:15:2.4194E-1:37:14:11:3:17 0/0:37:2:2:0:38:5.26%:50:2.4667E-1:37:36:26:10:38 0/1:32:8:1:7:37:21.62%:25:2.5617E-3:37:29:21:8:37 0/0:31:3:1:2:33:9.09%:37:1.1923E-1:36:30:23:7:33 0/0:32:5:2:3:29:17.24%:22:2.5917E-2:37:24:12:12:30 0/0:36:3:1:2:43:6.98%:53:1.2059E-1:36:40:29:11:44 0/0:32:2:0:2:21:9.52%:25:2.439E-1:39:19:14:5:22 0/0:35:5:0:5:40:12.5%:35:2.7371E-2:36:35:22:13:40 0/0:35:6:4:2:24:25%:11:1.0968E-2:38:18:14:4:24 0/0:35:4:2:2:26:15.38%:20:5.5222E-2:37:22:16:6:26 0/0:34:2:1:1:35:5.71%:47:2.4638E-1:36:33:28:5:38 0/0:35:3:1:2:30:10%:31:1.1864E-1:36:27:16:11:31 0/0:32:2:0:2:21:9.52%:25:2.439E-1:37:19:9:10:22 0/0:32:3:2:1:22:13.64%:19:1.1628E-1:37:19:13:6:22 0/0:33:5:2:3:24:20.83%:14:2.4823E-2:36:19:15:4:25 0/0:33:5:4:1:25:20%:17:2.5076E-2:38:20:16:4:29 0/0:35:2:1:1:23:8.7%:28:2.4444E-1:37:21:18:3:25 0/1:40:7:3:4:30:23.33%:22:5.2713E-3:37:23:20:3:32 0/0:33:6:3:3:30:20%:18:1.186E-2:37:24:22:2:32 0/0:31:3:0:3:24:12.5%:22:1.1702E-1:37:21:15:6:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:17:7:24 0/0:34:3:2:1:29:10.34%:31:1.1842E-1:37:26:14:12:29 0/0:42:4:1:3:27:14.81%:23:5.5494E-2:36:23:15:8:28 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:12 0/0:36:5:1:4:24:20.83%:14:2.4823E-2:37:19:16:3:24 0/0:60:1:0:1:22:4.55%:31:5E-1:37:21:14:7:22 0/0:36:4:0:4:30:13.33%:26:5.62E-2:37:26:14:12:30 0/0:40:5:3:2:23:21.74%:14:2.4548E-2:37:18:8:10:23 0/0:38:4:0:4:23:17.39%:18:5.4264E-2:39:19:12:7:24 0/0:36:5:1:4:25:20%:17:2.5076E-2:37:20:15:5:26 0/0:39:5:0:5:30:16.67%:21:2.6093E-2:38:25:13:12:33 0/0:35:6:3:3:28:21.43%:16:1.1603E-2:37:22:16:6:28 MTB_anc 335906 . T C . PASS AC=40;AF=0.136;AN=294;ANN=C|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.405A>G|p.Leu135Leu|405/2874|405/2874|135/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335906T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335906T>C||||||;HOM=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:7:3:4:52:13.46%:22:6.2977E-3:38:45:27:18:57 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:41:5:5:0:34:14.71%:27:2.6693E-2:39:29:13:16:35 0/0:60:2:0:2:12:16.67%:10:2.3913E-1:35:10:3:7:12 0/0:44:3:1:2:21:14.29%:19:1.1585E-1:36:18:14:4:21 0/0:37:1:0:1:17:5.88%:24:5E-1:36:16:11:5:20 0/0:43:5:3:2:27:18.52%:19:2.5527E-2:39:22:14:8:28 0/0:41:4:1:3:18:22.22%:10:5.1948E-2:35:14:8:6:19 0/1:42:7:1:6:33:21.21%:22:5.4855E-3:36:26:19:7:35 0/0:37:1:0:1:22:4.55%:31:5E-1:36:21:11:10:23 0/0:32:3:0:3:19:15.79%:17:1.1486E-1:38:16:12:4:19 0/1:38:8:3:5:39:20.51%:25:2.624E-3:38:31:17:14:43 0/0:37:1:0:1:11:9.09%:14:5E-1:35:10:5:5:12 0/0:36:4:2:2:26:15.38%:20:5.5222E-2:36:22:16:6:27 0/0:38:6:2:4:27:22.22%:16:1.1461E-2:38:21:10:11:31 0/1:38:7:2:5:19:36.84%:23:3.9926E-3:37:12:5:7:19 0/0:35:1:0:1:15:6.67%:21:5E-1:35:14:10:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:2:1:1:13:15.38%:13:2.4E-1:36:11:9:2:13 0/0:45:3:1:2:19:15.79%:17:1.1486E-1:36:16:10:6:20 0/0:36:4:2:2:19:21.05%:13:5.251E-2:37:15:9:6:20 0/1:43:7:2:5:42:16.67%:22:5.9563E-3:39:35:18:17:44 0/0:51:3:1:2:15:20%:11:1.1207E-1:34:12:8:4:15 0/0:60:1:0:1:25:4%:38:5E-1:38:24:12:12:26 0/0:40:6:3:3:45:13.33%:39:1.3082E-2:35:39:27:12:46 0/0:44:6:4:2:27:22.22%:16:1.1461E-2:36:21:14:7:28 0/0:60:1:0:1:22:4.55%:31:5E-1:35:21:10:11:23 0/0:38:2:2:0:19:10.53%:21:2.4324E-1:39:17:8:9:23 0/0:36:6:2:4:28:21.43%:16:1.1603E-2:37:22:18:4:32 0/0:38:1:1:0:26:3.85%:38:5E-1:36:25:17:8:28 0/0:39:4:3:1:34:11.76%:31:5.6946E-2:38:30:19:11:38 0/1:40:7:1:6:27:25.93%:22:5.0143E-3:36:20:16:4:31 0/0:46:1:0:1:15:6.67%:21:5E-1:38:14:9:5:16 0/0:49:2:2:0:22:9.09%:24:2.4419E-1:37:20:13:7:23 0/0:33:3:1:2:20:15%:16:1.1538E-1:41:17:10:7:21 0/0:37:5:2:3:43:11.63%:41:2.764E-2:37:38:24:14:46 0/1:41:8:2:6:45:17.78%:25:2.7808E-3:37:37:24:13:46 0/0:34:6:4:2:45:13.33%:39:1.3082E-2:36:39:23:16:46 0/0:38:4:2:2:34:11.76%:31:5.6946E-2:36:30:15:15:34 0/0:41:5:2:3:40:12.5%:35:2.7371E-2:37:35:26:9:41 0/0:42:5:2:3:31:16.13%:24:2.6257E-2:38:26:16:10:35 0/1:39:7:2:5:40:17.5%:22:5.8688E-3:37:33:18:15:42 0/0:48:2:0:2:25:8%:31:2.449E-1:35:23:15:8:29 0/0:37:3:1:2:25:12%:25:1.1735E-1:37:22:11:11:28 0/0:41:6:1:5:33:18.18%:23:1.219E-2:36:27:16:11:34 0/0:47:4:2:2:42:9.52%:43:5.801E-2:35:38:21:17:43 0/0:43:6:3:3:35:17.14%:25:1.238E-2:39:29:20:9:37 0/0:44:6:2:4:41:14.63%:33:1.2841E-2:36:35:22:13:45 0/1:43:7:2:5:44:15.91%:22:6.0363E-3:37:37:26:11:46 0/0:45:3:2:1:29:10.34%:31:1.1842E-1:39:26:15:11:30 0/0:0:0:0:0:10:0%:17:1E0:39:10:8:2:10 0/0:36:4:1:3:55:7.27%:65:5.9076E-2:36:51:35:16:58 0/0:35:2:1:1:27:7.41%:34:2.4528E-1:37:25:17:8:27 0/0:44:3:1:2:19:15.79%:17:1.1486E-1:38:16:11:5:20 0/0:45:5:0:5:31:16.13%:24:2.6257E-2:36:26:18:8:34 0/0:37:1:0:1:34:2.94%:51:5E-1:37:33:20:13:35 0/1:37:8:4:4:42:19.05%:25:2.7074E-3:38:34:23:11:47 0/0:36:2:0:2:20:10%:21:2.4359E-1:35:18:7:11:21 0/1:47:7:2:5:41:17.07%:22:5.9136E-3:38:34:18:16:41 0/0:42:4:1:3:33:12.12%:32:5.6777E-2:37:29:20:9:35 0/0:36:3:1:2:20:15%:16:1.1538E-1:36:17:12:5:22 0/0:40:5:1:4:31:16.13%:24:2.6257E-2:36:26:15:11:33 0/0:37:3:1:2:36:8.33%:40:1.1972E-1:37:33:21:12:38 0/0:47:2:1:1:18:11.11%:18:2.4286E-1:41:16:11:5:20 0/1:41:8:1:7:37:21.62%:25:2.5617E-3:39:29:18:11:38 0/1:39:7:3:4:43:16.28%:22:5.9972E-3:38:36:21:15:44 0/0:43:6:2:4:27:22.22%:16:1.1461E-2:37:21:15:6:27 0/1:50:7:3:4:41:17.07%:22:5.9136E-3:37:34:16:18:44 0/0:51:3:1:2:23:13.04%:22:1.1667E-1:37:20:9:11:26 0/0:36:2:1:1:12:16.67%:10:2.3913E-1:37:10:6:4:12 0/0:36:3:0:3:26:11.54%:25:1.1765E-1:37:23:12:11:27 0/0:37:3:2:1:32:9.38%:34:1.1905E-1:38:29:20:9:32 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:12 0/0:45:3:1:2:27:11.11%:28:1.1792E-1:39:24:11:13:29 0/1:34:9:1:8:47:19.15%:28:1.2811E-3:37:38:28:10:50 0/0:43:4:2:2:29:13.79%:26:5.5981E-2:37:25:18:7:32 0/0:40:6:3:3:41:14.63%:33:1.2841E-2:37:35:20:15:44 0/0:48:2:1:1:22:9.09%:24:2.4419E-1:37:20:9:11:22 0/0:35:5:1:4:33:15.15%:27:2.6557E-2:36:28:19:9:37 0/1:38:9:3:6:36:25%:29:1.1061E-3:37:27:21:6:38 0/1:41:10:4:6:34:29.41%:33:4.51E-4:38:24:15:9:35 0/0:40:6:2:4:48:12.5%:41:1.3237E-2:39:42:27:15:50 0/1:36:8:2:6:32:25%:26:2.3764E-3:37:24:15:9:35 0/0:38:1:0:1:30:3.33%:44:5E-1:36:29:17:12:31 0/0:33:2:0:2:19:10.53%:21:2.4324E-1:36:17:14:3:19 0/1:36:7:3:4:28:25%:22:5.1054E-3:37:21:15:6:30 0/0:40:6:4:2:28:21.43%:16:1.1603E-2:37:22:13:9:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:3:1:2:33:9.09%:37:1.1923E-1:37:30:18:12:34 0/0:49:3:2:1:22:13.64%:19:1.1628E-1:40:19:11:8:22 0/1:48:6:2:4:18:33.33%:20:9.5308E-3:37:12:7:5:19 0/0:60:1:1:0:20:5%:27:5E-1:39:19:16:3:21 0/1:36:8:3:5:32:25%:26:2.3764E-3:37:24:19:5:36 0/0:46:5:1:4:34:14.71%:27:2.6693E-2:37:29:14:15:34 0/1:36:9:4:5:37:24.32%:29:1.1256E-3:36:28:16:12:40 0/0:45:3:2:1:21:14.29%:19:1.1585E-1:38:18:12:6:25 0/0:40:4:1:3:30:13.33%:26:5.62E-2:36:26:19:7:31 0/0:35:3:1:2:35:8.57%:40:1.1957E-1:36:32:24:8:35 0/1:38:10:3:7:29:34.48%:34:3.8387E-4:37:19:12:7:30 0/1:36:12:4:8:36:33.33%:40:8.1472E-5:37:24:15:9:39 0/0:36:6:0:6:37:16.22%:28:1.2549E-2:37:31:21:10:40 0/1:39:8:1:7:52:15.38%:25:2.9216E-3:36:44:29:15:55 0/0:36:5:3:2:24:20.83%:14:2.4823E-2:36:19:12:7:25 0/0:34:4:1:3:28:14.29%:23:5.5746E-2:35:24:18:6:30 0/0:41:5:2:3:25:20%:17:2.5076E-2:37:20:14:6:27 0/0:40:6:1:5:35:17.14%:25:1.238E-2:36:29:21:8:35 0/1:37:7:4:3:36:19.44%:22:5.6667E-3:37:29:17:12:38 0/1:38:8:4:4:45:17.78%:25:2.7808E-3:36:37:30:7:46 0/0:35:6:2:4:45:13.33%:39:1.3082E-2:36:39:28:11:48 0/1:36:10:3:7:47:21.28%:32:5.7272E-4:37:37:26:11:48 0/1:39:14:7:7:50:28%:46:2.1224E-5:38:36:23:13:56 0/0:41:5:0:5:34:14.71%:27:2.6693E-2:36:29:16:13:37 0/0:37:5:3:2:25:20%:17:2.5076E-2:37:20:15:5:26 0/0:35:5:0:5:51:9.8%:53:2.8203E-2:37:46:29:17:52 0/0:35:6:3:3:34:17.65%:23:1.2287E-2:35:28:18:10:36 0/1:34:10:4:6:38:26.32%:33:4.9525E-4:36:28:24:4:41 0/0:35:5:3:2:32:15.62%:24:2.6412E-2:35:27:18:9:36 0/0:37:4:2:2:28:14.29%:23:5.5746E-2:37:24:14:10:29 0/0:31:4:1:3:20:20%:13:5.3015E-2:35:16:11:5:24 0/0:37:4:3:1:42:9.52%:43:5.801E-2:37:38:27:11:44 0/1:35:8:1:7:40:20%:25:2.653E-3:36:32:24:8:41 0/1:35:7:5:2:36:19.44%:22:5.6667E-3:36:29:22:7:37 0/1:35:8:3:5:35:22.86%:26:2.4931E-3:38:27:15:12:36 0/0:44:3:1:2:46:6.52%:56:1.2088E-1:37:43:31:12:48 0/0:35:4:1:3:29:13.79%:26:5.5981E-2:35:25:17:8:31 0/1:33:7:0:7:41:17.07%:22:5.9136E-3:37:34:22:12:42 0/0:35:6:4:2:29:20.69%:18:1.1736E-2:36:23:18:5:29 0/1:35:7:4:3:35:20%:22:5.6095E-3:36:28:20:8:36 0/0:35:5:2:3:42:11.9%:38:2.7555E-2:36:37:28:9:43 0/1:39:9:2:7:41:21.95%:29:1.1955E-3:35:32:19:13:43 0/0:39:5:2:3:26:19.23%:17:2.531E-2:36:21:12:9:28 0/0:36:5:3:2:25:20%:17:2.5076E-2:37:20:14:6:26 0/1:37:7:4:3:31:22.58%:22:5.3469E-3:37:24:17:7:34 0/0:37:6:5:1:31:19.35%:20:1.1977E-2:36:25:19:6:31 0/0:35:5:1:4:27:18.52%:19:2.5527E-2:35:22:19:3:29 0/1:38:13:6:7:37:35.14%:44:3.404E-5:36:24:20:4:38 0/1:35:11:6:5:38:28.95%:36:2.1011E-4:35:27:25:2:39 0/0:37:4:0:4:27:14.81%:23:5.5494E-2:36:23:18:5:27 0/0:44:3:0:3:30:10%:31:1.1864E-1:38:27:19:8:30 0/0:36:5:3:2:36:13.89%:29:2.6944E-2:37:31:18:13:36 0/0:48:4:1:3:32:12.5%:29:5.6596E-2:35:28:20:8:32 0/0:37:1:0:1:15:6.67%:21:5E-1:36:14:9:5:15 0/0:35:5:1:4:24:20.83%:14:2.4823E-2:36:19:16:3:25 0/0:60:2:0:2:25:8%:31:2.449E-1:37:23:16:7:25 0/0:44:6:2:4:35:17.14%:25:1.238E-2:37:29:16:13:36 0/0:44:6:3:3:24:25%:11:1.0968E-2:35:18:10:8:26 0/0:47:4:0:4:26:15.38%:20:5.5222E-2:39:22:14:8:26 0/0:41:5:1:4:30:16.67%:21:2.6093E-2:36:25:17:8:33 0/0:46:5:0:5:37:13.51%:32:2.706E-2:36:32:18:14:38 0/1:36:7:4:3:30:23.33%:22:5.2713E-3:37:23:16:7:30 MTB_anc 335919 . T G . PASS AC=47;AF=0.159;AN=296;ANN=G|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.392A>C|p.Asp131Ala|392/2874|392/2874|131/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335919T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335919T>G||||||;HOM=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:7:3:4:49:14.29%:22:6.2092E-3:37:42:26:16:63 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:39:5:5:0:38:13.16%:32:2.7169E-2:39:33:14:19:39 0/0:60:3:0:3:12:25%:6:1.087E-1:34:9:3:6:13 0/0:42:3:1:2:23:13.04%:22:1.1667E-1:35:20:16:4:29 0/0:37:1:0:1:19:5.26%:28:5E-1:37:18:13:5:25 0/0:46:5:3:2:32:15.62%:24:2.6412E-2:38:27:15:12:35 0/0:40:4:1:3:21:19.05%:15:5.3471E-2:36:17:9:8:26 0/1:40:8:1:7:32:25%:26:2.3764E-3:36:24:16:8:36 0/0:37:1:0:1:21:4.76%:31:5E-1:38:20:10:10:23 0/0:30:3:0:3:22:13.64%:19:1.1628E-1:35:19:15:4:26 0/1:38:9:4:5:45:20%:29:1.2547E-3:38:36:21:15:52 0/0:37:1:0:1:12:8.33%:14:5E-1:33:11:6:5:17 0/0:34:4:2:2:30:13.33%:26:5.62E-2:36:26:19:7:35 0/0:40:5:1:4:26:19.23%:17:2.531E-2:39:21:10:11:35 0/1:38:7:2:5:19:36.84%:23:3.9926E-3:37:12:5:7:25 0/0:37:2:1:1:16:12.5%:15:2.4194E-1:35:14:10:4:17 0/1:35:6:4:2:11:54.55%:22:6.192E-3:33:5:2:3:15 0/0:37:2:1:1:14:14.29%:12:2.4074E-1:35:12:10:2:15 0/0:44:3:1:2:18:16.67%:14:1.1429E-1:35:15:9:6:21 0/0:36:4:2:2:23:17.39%:18:5.4264E-2:35:19:11:8:24 0/1:42:7:2:5:40:17.5%:22:5.8688E-3:39:33:18:15:45 0/0:51:3:1:2:13:23.08%:9:1.1E-1:38:10:7:3:13 0/0:46:2:0:2:23:8.7%:28:2.4444E-1:40:21:11:10:26 0/0:41:6:3:3:48:12.5%:41:1.3237E-2:37:42:30:12:56 0/0:44:6:4:2:29:20.69%:18:1.1736E-2:39:23:16:7:34 0/0:60:1:0:1:24:4.17%:34:5E-1:37:23:11:12:26 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:40:15:7:8:26 0/1:36:7:2:5:31:22.58%:22:5.3469E-3:35:24:18:6:43 0/0:45:2:2:0:29:6.9%:37:2.4561E-1:35:27:19:8:43 0/0:39:4:3:1:39:10.26%:41:5.7662E-2:39:35:24:11:46 0/1:39:8:1:7:32:25%:26:2.3764E-3:37:24:19:5:38 0/0:60:2:0:2:17:11.76%:18:2.4242E-1:38:15:10:5:18 0/0:60:1:1:0:24:4.17%:34:5E-1:36:23:15:8:26 0/0:36:3:1:2:25:12%:25:1.1735E-1:41:22:12:10:27 0/0:42:5:3:2:45:11.11%:44:2.7799E-2:38:40:23:17:56 0/1:41:10:2:8:50:20%:32:5.9342E-4:38:40:25:15:57 0/0:33:4:3:1:47:8.51%:53:5.849E-2:39:43:28:15:54 0/0:40:4:2:2:33:12.12%:32:5.6777E-2:36:29:15:14:36 0/0:43:5:2:3:43:11.63%:41:2.764E-2:38:38:27:11:47 0/0:41:5:2:3:30:16.67%:21:2.6093E-2:40:25:13:12:40 0/1:44:7:2:5:42:16.67%:22:5.9563E-3:38:35:17:18:50 0/0:48:2:0:2:23:8.7%:28:2.4444E-1:39:21:14:7:28 0/0:37:3:1:2:23:13.04%:22:1.1667E-1:40:20:9:11:30 0/0:45:5:0:5:29:17.24%:22:2.5917E-2:35:24:14:10:39 0/0:48:4:2:2:44:9.09%:46:5.8215E-2:38:40:24:16:48 0/1:42:7:4:3:34:20.59%:22:5.5492E-3:38:27:18:9:41 0/1:41:7:3:4:50:14%:22:6.2398E-3:36:43:25:18:60 0/1:43:7:2:5:46:15.22%:22:6.1097E-3:38:39:27:12:56 0/0:41:4:3:1:34:11.76%:31:5.6946E-2:40:30:18:12:36 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:14 0/0:40:4:1:3:54:7.41%:62:5.9012E-2:37:50:36:14:67 0/0:37:3:2:1:27:11.11%:28:1.1792E-1:37:24:16:8:32 0/0:49:2:1:1:19:10.53%:21:2.4324E-1:41:17:12:5:22 0/0:46:5:0:5:29:17.24%:22:2.5917E-2:35:24:18:6:35 0/0:37:3:1:2:38:7.89%:43:1.1986E-1:37:34:21:13:48 0/1:38:8:4:4:39:20.51%:25:2.624E-3:38:31:22:9:52 0/0:36:2:0:2:17:11.76%:18:2.4242E-1:38:15:7:8:20 0/1:48:7:2:5:43:16.28%:22:5.9972E-3:37:36:20:16:55 0/0:43:4:1:3:33:12.12%:32:5.6777E-2:38:29:20:9:37 0/0:36:4:1:3:23:17.39%:18:5.4264E-2:36:19:12:7:26 0/0:39:5:1:4:31:16.13%:24:2.6257E-2:37:26:16:10:39 0/0:37:2:0:2:33:6.06%:44:2.4615E-1:39:31:20:11:43 0/0:48:2:1:1:25:8%:31:2.449E-1:37:23:14:9:28 0/1:39:8:1:7:36:22.22%:25:2.5282E-3:40:28:17:11:41 0/1:39:7:4:3:39:17.95%:22:5.8219E-3:38:32:19:13:45 0/0:41:6:2:4:29:20.69%:18:1.1736E-2:39:23:17:6:31 0/1:48:8:3:5:42:19.05%:25:2.7074E-3:38:34:15:19:46 0/0:52:3:1:2:23:13.04%:22:1.1667E-1:34:20:11:9:28 0/0:44:3:0:3:13:23.08%:9:1.1E-1:38:10:6:4:17 0/0:35:3:0:3:25:12%:25:1.1735E-1:41:22:11:11:30 0/0:36:3:2:1:30:10%:31:1.1864E-1:38:27:19:8:33 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:10 0/0:42:3:1:2:31:9.68%:34:1.1885E-1:41:28:12:16:35 0/1:36:8:0:8:54:14.81%:25:2.9557E-3:37:46:32:14:66 0/0:42:4:2:2:32:12.5%:29:5.6596E-2:36:28:17:11:41 0/0:44:6:3:3:44:13.64%:36:1.3026E-2:37:38:21:17:52 0/0:44:3:1:2:20:15%:16:1.1538E-1:39:17:8:9:21 0/0:33:5:1:4:38:13.16%:32:2.7169E-2:36:33:20:13:47 0/1:42:8:3:5:35:22.86%:26:2.4931E-3:36:27:19:8:41 0/1:43:10:4:6:39:25.64%:32:5.0524E-4:36:29:17:12:43 0/0:39:6:2:4:49:12.24%:44:1.3285E-2:39:43:25:18:62 0/1:35:9:2:7:34:26.47%:29:1.0644E-3:36:25:17:8:42 0/0:60:1:0:1:29:3.45%:45:5E-1:40:28:16:12:35 0/0:28:2:0:2:23:8.7%:28:2.4444E-1:36:21:15:6:29 0/1:37:7:3:4:29:24.14%:22:5.1909E-3:38:22:16:6:32 0/0:40:6:4:2:32:18.75%:20:1.2087E-2:35:26:16:10:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:39:4:2:2:35:11.43%:35:5.7106E-2:40:31:20:11:37 0/0:52:3:2:1:23:13.04%:22:1.1667E-1:40:20:10:10:27 0/0:48:6:2:4:20:30%:7:1.0098E-2:37:14:6:8:23 0/0:60:1:1:0:23:4.35%:34:5E-1:38:22:17:5:24 0/1:34:9:4:5:38:23.68%:29:1.1256E-3:35:28:22:6:46 0/0:44:5:1:4:33:15.15%:27:2.6557E-2:38:28:15:13:34 0/1:38:10:5:5:40:25%:32:5.1483E-4:36:30:18:12:46 0/0:44:3:2:1:23:13.04%:22:1.1667E-1:40:20:14:6:25 0/0:40:4:1:3:28:14.29%:23:5.5746E-2:35:24:19:5:30 0/0:44:3:1:2:34:8.82%:37:1.194E-1:37:31:24:7:40 0/1:42:9:3:6:34:26.47%:29:1.0644E-3:35:25:13:12:39 0/1:38:12:4:8:38:31.58%:40:8.7276E-5:37:26:17:9:41 0/0:35:6:0:6:37:16.22%:28:1.2549E-2:38:31:21:10:46 0/1:40:7:1:6:49:14.29%:22:6.2092E-3:37:42:29:13:65 0/0:35:5:3:2:28:17.86%:19:2.5729E-2:37:23:14:9:29 0/0:36:6:2:4:32:18.75%:20:1.2087E-2:35:26:19:7:39 0/0:41:5:2:3:27:18.52%:19:2.5527E-2:37:22:12:10:33 0/0:39:6:1:5:37:16.22%:28:1.2549E-2:38:31:21:10:38 0/1:39:7:4:3:39:17.95%:22:5.8219E-3:38:32:18:14:46 0/1:42:8:4:4:47:17.02%:25:2.8249E-3:37:39:32:7:50 0/1:35:7:2:5:48:14.58%:22:6.1774E-3:36:41:27:14:55 0/1:37:10:3:7:45:22.22%:32:5.5766E-4:38:35:27:8:55 0/1:40:12:5:7:48:25%:39:1.1153E-4:36:36:23:13:63 0/0:41:5:0:5:32:15.62%:24:2.6412E-2:36:27:15:12:45 0/0:36:6:4:2:31:19.35%:20:1.1977E-2:36:25:18:7:39 0/1:32:8:1:7:54:14.81%:25:2.9557E-3:37:46:28:18:63 0/0:35:6:3:3:29:20.69%:18:1.1736E-2:35:23:16:7:39 0/1:34:10:4:6:41:24.39%:32:5.2405E-4:34:31:25:6:47 0/0:35:5:3:2:27:18.52%:19:2.5527E-2:37:22:18:4:41 0/0:37:4:2:2:27:14.81%:23:5.5494E-2:36:23:14:9:37 0/0:32:6:2:4:23:26.09%:11:1.0777E-2:37:17:13:4:30 0/0:36:5:4:1:49:10.2%:46:2.8014E-2:36:43:32:11:61 0/1:35:8:1:7:44:18.18%:25:2.7573E-3:37:36:27:9:50 0/1:36:9:5:4:41:21.95%:29:1.1955E-3:36:32:22:10:49 0/1:35:7:2:5:34:20.59%:22:5.5492E-3:39:27:16:11:39 0/0:40:5:1:4:54:9.26%:56:2.8317E-2:36:48:35:13:58 0/0:36:4:1:3:28:14.29%:23:5.5746E-2:35:24:16:8:32 0/1:36:7:0:7:41:17.07%:22:5.9136E-3:36:34:23:11:48 0/1:35:8:4:4:36:22.22%:25:2.5282E-3:38:28:22:6:39 0/1:36:7:4:3:39:17.95%:22:5.8219E-3:38:32:23:9:47 0/0:35:5:2:3:35:14.29%:30:2.6822E-2:35:30:25:5:41 0/1:38:10:3:7:39:25.64%:32:5.0524E-4:34:29:17:12:48 0/0:40:6:2:4:28:21.43%:16:1.1603E-2:37:22:12:10:33 0/0:33:5:3:2:28:17.86%:19:2.5729E-2:38:23:16:7:34 0/0:36:6:4:2:29:20.69%:18:1.1736E-2:36:23:17:6:38 0/1:36:7:6:1:31:22.58%:22:5.3469E-3:34:24:16:8:37 0/0:34:4:1:3:25:16%:21:5.4928E-2:34:21:19:2:32 0/1:38:13:6:7:40:32.5%:44:3.8184E-5:36:27:21:6:46 0/1:37:11:6:5:38:28.95%:36:2.1011E-4:35:27:25:2:39 0/0:37:4:0:4:30:13.33%:26:5.62E-2:36:26:20:6:34 0/0:43:3:0:3:31:9.68%:34:1.1885E-1:39:28:19:9:33 0/0:36:4:3:1:35:11.43%:35:5.7106E-2:37:31:18:13:38 0/0:48:4:1:3:31:12.9%:29:5.6405E-2:37:27:19:8:33 0/0:34:2:0:2:16:12.5%:15:2.4194E-1:36:14:10:4:19 0/0:36:5:1:4:24:20.83%:14:2.4823E-2:35:19:16:3:31 0/0:60:2:0:2:27:7.41%:34:2.4528E-1:37:25:17:8:31 0/0:43:6:2:4:34:17.65%:23:1.2287E-2:36:28:15:13:39 0/1:42:7:4:3:25:28%:23:4.8126E-3:37:18:10:8:29 0/0:47:4:0:4:27:14.81%:23:5.5494E-2:38:23:16:7:34 0/0:41:5:2:3:35:14.29%:30:2.6822E-2:35:30:19:11:41 0/0:46:5:0:5:36:13.89%:29:2.6944E-2:36:31:19:12:39 0/1:35:7:4:3:32:21.88%:22:5.4182E-3:36:25:18:7:33 MTB_anc 335920 . C G . PASS AC=44;AF=0.147;AN=300;ANN=G|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.391G>C|p.Asp131His|391/2874|391/2874|131/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335920C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335920C>G||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:7:3:4:70:10%:21:6.675E-3:39:63:29:34:70 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:10 0/0:41:5:5:0:41:12.2%:38:2.7465E-2:45:36:15:21:41 0/0:60:3:0:3:15:20%:11:1.1207E-1:36:12:3:9:15 0/0:44:3:1:2:29:10.34%:31:1.1842E-1:39:26:15:11:31 0/0:37:1:0:1:27:3.7%:41:5E-1:39:26:13:13:28 0/0:46:5:3:2:35:14.29%:30:2.6822E-2:45:30:15:15:35 0/0:39:4:1:3:28:14.29%:23:5.5746E-2:38:24:9:15:28 0/1:40:9:1:8:40:22.5%:29:1.1791E-3:39:31:16:15:41 0/0:37:1:0:1:27:3.7%:41:5E-1:43:26:10:16:27 0/0:31:2:0:2:26:7.69%:30:2.451E-1:42:24:16:8:27 0/1:39:9:4:5:60:15%:28:1.4138E-3:41:51:20:31:61 0/0:37:1:0:1:18:5.56%:24:5E-1:40:17:7:10:19 0/0:37:3:2:1:40:7.5%:46:1.2025E-1:38:37:19:18:42 0/0:39:6:2:4:36:16.67%:25:1.2467E-2:43:30:11:19:37 0/1:38:7:2:5:35:20%:22:5.6095E-3:39:28:8:20:35 0/0:37:2:1:1:21:9.52%:25:2.439E-1:41:19:10:9:21 0/1:35:7:5:2:19:36.84%:23:3.9926E-3:34:12:2:10:19 0/0:37:2:1:1:16:12.5%:15:2.4194E-1:45:14:11:3:16 0/0:44:3:1:2:22:13.64%:19:1.1628E-1:39:19:10:9:22 0/0:37:4:2:2:24:16.67%:18:5.461E-2:43:20:11:9:24 0/1:41:7:2:5:52:13.46%:22:6.2977E-3:43:45:18:27:52 0/0:51:3:1:2:13:23.08%:9:1.1E-1:43:10:6:4:14 0/0:45:2:0:2:27:7.41%:34:2.4528E-1:44:25:11:14:27 0/0:41:6:3:3:64:9.38%:65:1.3824E-2:39:58:30:28:64 0/0:44:6:4:2:36:16.67%:25:1.2467E-2:46:30:17:13:37 0/0:60:1:0:1:28:3.57%:41:5E-1:44:27:11:16:29 0/0:38:2:2:0:27:7.41%:34:2.4528E-1:43:25:7:18:27 0/1:36:7:2:5:48:14.58%:22:6.1774E-3:43:41:19:22:51 0/0:47:2:2:0:46:4.35%:63:2.4725E-1:37:44:19:25:46 0/0:39:4:3:1:47:8.51%:53:5.849E-2:43:43:24:19:48 0/1:39:8:1:7:40:20%:25:2.653E-3:39:32:19:13:41 0/0:60:2:0:2:18:11.11%:18:2.4286E-1:45:16:10:6:18 0/0:60:1:1:0:28:3.57%:41:5E-1:39:27:15:12:29 0/0:37:3:1:2:28:10.71%:28:1.1818E-1:46:25:12:13:28 0/0:41:5:3:2:63:7.94%:71:2.878E-2:42:58:24:34:64 0/1:40:10:2:8:63:15.87%:31:6.6338E-4:44:53:26:27:63 0/0:34:4:3:1:54:7.41%:62:5.9012E-2:41:50:28:22:56 0/0:42:4:2:2:38:10.53%:37:5.7534E-2:41:34:16:18:38 0/0:46:5:2:3:50:10%:49:2.8142E-2:43:45:29:16:50 0/0:40:5:2:3:48:10.42%:46:2.8014E-2:42:43:16:27:49 0/1:44:7:2:5:57:12.28%:21:6.4254E-3:42:50:18:32:59 0/0:48:2:0:2:29:6.9%:37:2.4561E-1:43:27:13:14:31 0/0:35:3:1:2:32:9.38%:34:1.1905E-1:46:29:10:19:33 0/0:41:6:1:5:42:14.29%:33:1.2905E-2:38:36:15:21:45 0/0:48:4:2:2:54:7.41%:62:5.9012E-2:41:50:25:25:55 0/1:43:7:4:3:47:14.89%:22:6.1442E-3:40:40:20:20:47 0/0:43:6:2:4:61:9.84%:62:1.3737E-2:40:55:25:30:63 0/1:43:7:2:5:65:10.77%:21:6.5904E-3:39:58:29:29:65 0/0:41:4:3:1:37:10.81%:38:5.7399E-2:44:33:18:15:38 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:40:4:2:2:70:5.71%:88:5.9812E-2:40:66:34:32:74 0/0:37:3:2:1:31:9.68%:34:1.1885E-1:40:28:16:12:32 0/0:44:3:1:2:23:13.04%:22:1.1667E-1:44:20:12:8:23 0/0:45:5:0:5:38:13.16%:32:2.7169E-2:39:33:16:17:39 0/0:35:3:1:2:54:5.56%:69:1.215E-1:39:51:23:28:55 0/1:38:7:3:4:55:12.73%:21:6.377E-3:41:48:22:26:58 0/0:34:2:0:2:26:7.69%:30:2.451E-1:41:24:7:17:26 0/1:50:7:2:5:60:11.67%:21:6.4922E-3:40:53:21:32:61 0/0:43:4:1:3:38:10.53%:37:5.7534E-2:43:34:21:13:38 0/0:36:4:1:3:32:12.5%:29:5.6596E-2:39:28:12:16:32 0/0:39:5:1:4:44:11.36%:41:2.7721E-2:40:39:16:23:45 0/0:36:3:1:2:46:6.52%:56:1.2088E-1:40:43:21:22:47 0/0:46:2:1:1:30:6.67%:37:2.4576E-1:40:28:14:14:30 0/1:41:8:1:7:43:18.6%:25:2.7329E-3:43:35:18:17:43 0/1:39:7:4:3:46:15.22%:22:6.1097E-3:46:39:18:21:47 0/0:43:6:2:4:33:18.18%:23:1.219E-2:44:27:17:10:33 0/1:47:8:3:5:49:16.33%:25:2.8658E-3:43:41:16:25:49 0/0:52:3:1:2:29:10.34%:31:1.1842E-1:44:26:11:15:29 0/0:44:3:0:3:17:17.65%:14:1.1364E-1:43:14:6:8:18 0/0:35:3:0:3:30:10%:31:1.1864E-1:45:27:12:15:31 0/0:37:3:2:1:35:8.57%:40:1.1957E-1:46:32:19:13:36 0/0:0:0:0:0:11:0%:22:1E0:40:11:6:5:11 0/0:43:3:1:2:37:8.11%:43:1.1986E-1:47:34:12:22:38 0/1:35:8:0:8:67:11.94%:25:3.1302E-3:40:59:33:26:68 0/0:40:4:2:2:43:9.3%:47:5.8115E-2:40:39:17:22:44 0/0:43:6:3:3:60:10%:59:1.3706E-2:40:54:22:32:60 0/0:45:3:1:2:22:13.64%:19:1.1628E-1:42:19:8:11:22 0/0:33:4:1:3:51:7.84%:59:5.8806E-2:37:47:20:27:55 0/1:39:9:3:6:44:20.45%:29:1.2408E-3:42:35:20:15:44 0/1:42:10:4:6:54:18.52%:32:6.18E-4:40:44:17:27:56 0/0:40:6:2:4:67:8.96%:71:1.3903E-2:40:61:27:34:67 0/1:34:9:2:7:48:18.75%:28:1.2935E-3:38:39:19:20:48 0/0:60:1:0:1:38:2.63%:58:5E-1:45:37:16:21:38 0/0:33:2:0:2:34:5.88%:43:2.4627E-1:39:32:15:17:34 0/0:37:6:2:4:35:17.14%:25:1.238E-2:39:29:16:13:36 0/0:41:6:4:2:38:15.79%:28:1.2628E-2:39:32:17:15:39 0/0:0:0:0:0:9:0%:18:1E0:43:9:3:6:9 0/0:45:3:2:1:37:8.11%:43:1.1986E-1:44:34:20:14:38 0/0:52:3:2:1:30:10%:31:1.1864E-1:45:27:10:17:30 0/0:47:6:2:4:23:26.09%:11:1.0777E-2:41:17:6:11:24 0/0:60:1:1:0:24:4.17%:34:5E-1:48:23:17:6:24 0/1:37:9:4:5:55:16.36%:28:1.3694E-3:37:46:22:24:55 0/0:46:5:1:4:34:14.71%:27:2.6693E-2:46:29:14:15:36 0/1:37:10:5:5:50:20%:32:5.9342E-4:40:40:18:22:51 0/0:43:3:2:1:30:10%:31:1.1864E-1:44:27:14:13:30 0/0:38:4:1:3:34:11.76%:31:5.6946E-2:39:30:18:12:35 0/0:44:3:1:2:41:7.32%:50:1.2037E-1:39:38:25:13:41 0/1:40:9:3:6:48:18.75%:28:1.2935E-3:38:39:14:25:48 0/1:37:12:4:8:42:28.57%:40:9.7866E-5:41:30:17:13:42 0/0:35:6:0:6:49:12.24%:44:1.3285E-2:42:43:22:21:50 0/0:39:7:1:6:72:9.72%:71:6.7056E-3:38:65:30:35:73 0/0:36:5:3:2:32:15.62%:24:2.6412E-2:40:27:13:14:33 0/0:36:6:2:4:45:13.33%:39:1.3082E-2:37:39:18:21:46 0/0:37:5:2:3:33:15.15%:27:2.6557E-2:41:28:14:14:34 0/1:39:7:2:5:39:17.95%:22:5.8219E-3:42:32:21:11:39 0/1:39:7:4:3:52:13.46%:22:6.2977E-3:43:45:18:27:52 0/1:42:8:4:4:54:14.81%:25:2.9557E-3:41:46:32:14:55 0/1:35:7:2:5:57:12.28%:21:6.4254E-3:38:50:26:24:58 0/1:37:10:3:7:64:15.62%:31:6.6774E-4:40:54:30:24:64 0/1:40:13:6:7:68:19.12%:41:6.4842E-5:39:55:22:33:71 0/0:41:5:0:5:48:10.42%:46:2.8014E-2:40:43:15:28:50 0/0:36:6:4:2:45:13.33%:39:1.3082E-2:37:39:18:21:45 0/1:36:8:1:7:69:11.59%:25:3.1516E-3:40:61:27:34:71 0/0:36:6:3:3:47:12.77%:42:1.3188E-2:37:41:16:25:48 0/1:34:10:4:6:55:18.18%:32:6.2367E-4:38:45:24:21:56 0/0:34:5:3:2:51:9.8%:53:2.8203E-2:38:46:20:26:51 0/0:37:4:2:2:46:8.7%:49:5.8402E-2:38:42:15:27:46 0/0:32:5:2:3:32:15.62%:24:2.6412E-2:38:27:13:14:33 0/0:37:5:4:1:65:7.69%:74:2.8856E-2:37:60:31:29:66 0/1:38:8:1:7:55:14.55%:25:2.9718E-3:42:47:27:20:56 0/1:37:9:5:4:53:16.98%:28:1.3495E-3:41:44:23:21:54 0/1:35:7:3:4:43:16.28%:22:5.9972E-3:44:36:16:20:44 0/0:42:4:1:3:67:6.06%:81:5.9648E-2:38:62:34:28:69 0/0:37:4:1:3:35:11.43%:35:5.7106E-2:38:31:17:14:36 0/1:36:7:0:7:49:14.29%:22:6.2092E-3:40:42:22:20:51 0/1:36:8:4:4:48:16.67%:25:2.8457E-3:38:40:22:18:48 0/0:33:6:3:3:47:12.77%:42:1.3188E-2:38:41:23:18:49 0/0:36:5:2:3:44:11.36%:41:2.7721E-2:37:39:25:14:45 0/1:39:10:3:7:52:19.23%:32:6.0611E-4:37:42:19:23:54 0/0:39:6:2:4:36:16.67%:25:1.2467E-2:39:30:12:18:36 0/0:34:5:3:2:36:13.89%:29:2.6944E-2:40:31:15:16:37 0/0:36:6:4:2:42:14.29%:33:1.2905E-2:39:36:18:18:42 0/1:37:7:6:1:36:19.44%:22:5.6667E-3:37:29:17:12:39 0/0:32:6:1:5:32:18.75%:20:1.2087E-2:39:26:19:7:32 0/1:38:12:5:7:49:24.49%:39:1.1358E-4:41:37:21:16:50 0/1:37:11:6:5:39:28.21%:36:2.1547E-4:38:28:24:4:40 0/0:35:5:1:4:37:13.51%:32:2.706E-2:38:32:22:10:37 0/0:42:3:0:3:38:7.89%:43:1.2E-1:42:35:19:16:39 0/0:35:5:3:2:41:12.2%:38:2.7465E-2:41:36:18:18:41 0/0:48:4:1:3:35:11.43%:35:5.7106E-2:42:31:19:12:35 0/0:34:2:0:2:24:8.33%:27:2.4468E-1:37:22:10:12:24 0/0:37:5:1:4:33:15.15%:27:2.6557E-2:37:28:18:10:33 0/0:60:2:0:2:31:6.45%:40:2.459E-1:41:29:17:12:31 0/0:42:6:2:4:45:13.33%:39:1.3082E-2:38:39:14:25:46 0/1:43:7:4:3:31:22.58%:22:5.3469E-3:40:24:10:14:31 0/0:48:4:0:4:37:10.81%:38:5.7399E-2:41:33:16:17:37 0/0:41:6:2:4:42:14.29%:33:1.2905E-2:39:36:19:17:42 0/0:46:5:0:5:41:12.2%:38:2.7465E-2:39:36:19:17:41 0/1:36:7:4:3:38:18.42%:22:5.7727E-3:39:31:18:13:38 MTB_anc 335922 . C G . PASS AC=44;AF=0.147;AN=300;ANN=G|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.389G>C|p.Gly130Ala|389/2874|389/2874|130/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335922C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335922C>G||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:7:3:4:69:10.14%:21:6.659E-3:42:62:28:34:71 0/0:0:0:0:0:11:0%:22:1E0:39:11:2:9:11 0/0:41:5:5:0:40:12.5%:35:2.7371E-2:45:35:15:20:40 0/0:60:3:0:3:15:20%:11:1.1207E-1:38:12:2:10:15 0/0:41:3:1:2:33:9.09%:37:1.1923E-1:41:30:16:14:33 0/0:37:1:0:1:28:3.57%:41:5E-1:41:27:13:14:28 0/0:46:5:3:2:36:13.89%:29:2.6944E-2:47:31:15:16:36 0/0:38:4:1:3:30:13.33%:26:5.62E-2:41:26:9:17:30 0/1:41:8:1:7:42:19.05%:25:2.7074E-3:39:34:16:18:44 0/0:37:1:0:1:29:3.45%:45:5E-1:46:28:10:18:29 0/0:34:2:0:2:27:7.41%:34:2.4528E-1:42:25:16:9:28 0/1:39:9:4:5:62:14.52%:28:1.4297E-3:43:53:21:32:62 0/0:37:1:0:1:20:5%:27:5E-1:43:19:8:11:21 0/0:36:4:2:2:43:9.3%:47:5.8115E-2:42:39:18:21:45 0/0:38:6:2:4:37:16.22%:25:1.2467E-2:45:30:11:19:38 0/1:37:7:2:5:39:17.95%:22:5.8219E-3:40:32:8:24:39 0/0:37:2:1:1:21:9.52%:25:2.439E-1:43:19:9:10:21 0/1:36:7:5:2:19:36.84%:23:3.9926E-3:37:12:2:10:20 0/0:35:2:1:1:18:11.11%:18:2.4286E-1:45:16:12:4:18 0/0:43:3:1:2:23:13.04%:22:1.1667E-1:43:20:10:10:23 0/0:37:4:2:2:24:16.67%:18:5.461E-2:43:20:11:9:24 0/1:42:7:2:5:55:12.73%:21:6.377E-3:45:48:17:31:56 0/0:47:4:1:3:15:26.67%:8:4.9808E-2:44:11:8:3:15 0/0:43:2:0:2:29:6.9%:34:2.4545E-1:43:26:11:15:29 0/0:41:6:3:3:65:9.23%:68:1.3851E-2:40:59:30:29:65 0/0:44:6:4:2:36:16.67%:25:1.2467E-2:46:30:17:13:37 0/0:60:1:0:1:26:3.85%:38:5E-1:46:25:11:14:27 0/0:38:2:2:0:26:7.69%:30:2.451E-1:44:24:6:18:26 0/1:36:7:2:5:49:14.29%:22:6.2092E-3:43:42:19:23:52 0/0:47:2:2:0:47:4.26%:67:2.4731E-1:39:45:19:26:47 0/0:42:4:3:1:48:8.33%:52:5.8574E-2:43:44:23:21:49 0/1:39:8:1:7:41:19.51%:25:2.6808E-3:39:33:20:13:41 0/0:60:2:0:2:19:10.53%:21:2.4324E-1:45:17:10:7:19 0/0:47:2:2:0:29:6.9%:37:2.4561E-1:42:27:15:12:29 0/0:36:3:1:2:28:10.71%:28:1.1818E-1:47:25:12:13:28 0/0:42:5:3:2:69:7.25%:81:2.8994E-2:43:64:24:40:70 0/1:40:10:2:8:64:15.62%:31:6.6338E-4:44:53:26:27:64 0/0:34:5:4:1:57:8.77%:62:2.8522E-2:45:52:29:23:59 0/0:42:4:2:2:38:10.53%:37:5.7534E-2:45:34:15:19:39 0/0:46:5:2:3:51:9.8%:53:2.8203E-2:44:46:28:18:51 0/0:41:5:2:3:47:10.64%:47:2.7945E-2:43:42:16:26:50 0/1:43:7:2:5:56:12.5%:21:6.4016E-3:43:49:18:31:58 0/0:49:2:0:2:30:6.67%:37:2.4576E-1:45:28:14:14:32 0/0:37:3:1:2:33:9.09%:37:1.1923E-1:47:30:10:20:34 0/0:42:6:1:5:49:12.24%:44:1.3285E-2:42:43:17:26:49 0/0:48:4:2:2:58:6.9%:68:5.9254E-2:42:54:26:28:59 0/1:42:7:4:3:48:14.58%:22:6.1774E-3:44:41:21:20:48 0/0:44:6:2:4:63:9.52%:65:1.3796E-2:42:57:25:32:65 0/1:40:7:2:5:66:10.61%:21:6.6083E-3:40:59:29:30:66 0/0:39:4:3:1:37:10.81%:38:5.7399E-2:45:33:18:15:38 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:40:4:1:3:76:5.26%:97:6.0025E-2:41:72:37:35:78 0/0:37:3:2:1:32:9.38%:34:1.1905E-1:43:29:16:13:33 0/0:43:3:1:2:24:12.5%:22:1.1702E-1:45:21:12:9:24 0/0:45:5:0:5:39:12.82%:35:2.7273E-2:43:34:16:18:40 0/0:36:3:1:2:54:5.56%:69:1.215E-1:40:51:21:30:57 0/1:37:8:4:4:58:13.79%:25:3.0172E-3:42:50:23:27:61 0/0:34:2:0:2:27:7.41%:34:2.4528E-1:41:25:7:18:27 0/1:50:7:2:5:56:12.5%:21:6.4016E-3:42:49:20:29:60 0/0:43:4:1:3:37:10.81%:38:5.7399E-2:46:33:20:13:39 0/0:37:4:1:3:34:11.76%:31:5.6946E-2:41:30:12:18:34 0/0:42:4:1:3:43:9.3%:47:5.8115E-2:43:39:17:22:44 0/0:35:3:1:2:49:6.12%:63:1.2113E-1:43:46:21:25:49 0/0:48:2:1:1:30:6.67%:37:2.4576E-1:41:28:14:14:30 0/1:42:8:1:7:46:17.39%:25:2.8033E-3:44:38:18:20:46 0/1:40:7:4:3:48:14.58%:22:6.1774E-3:48:41:20:21:48 0/0:42:6:2:4:33:18.18%:23:1.219E-2:44:27:15:12:35 0/1:48:8:3:5:48:16.67%:25:2.8033E-3:45:38:14:24:49 0/0:52:3:1:2:30:10%:31:1.1842E-1:45:26:10:16:30 0/0:44:3:0:3:17:17.65%:14:1.1364E-1:42:14:6:8:18 0/0:34:3:0:3:32:9.38%:34:1.1905E-1:46:29:13:16:32 0/0:37:3:2:1:36:8.33%:40:1.1972E-1:48:33:19:14:37 0/0:33:1:0:1:11:9.09%:14:5E-1:41:10:6:4:11 0/0:43:3:1:2:38:7.89%:43:1.2E-1:47:35:12:23:39 0/1:34:7:0:7:69:10.14%:21:6.659E-3:42:62:33:29:71 0/0:42:4:2:2:43:9.3%:47:5.8115E-2:40:39:17:22:43 0/0:45:6:3:3:62:9.68%:62:1.3767E-2:40:56:22:34:62 0/0:43:3:1:2:22:13.64%:19:1.1628E-1:48:19:8:11:22 0/0:35:4:1:3:57:7.02%:68:5.9196E-2:39:53:21:32:58 0/1:42:8:3:5:45:17.78%:25:2.7808E-3:43:37:19:18:46 0/1:42:10:4:6:54:18.52%:32:6.18E-4:41:44:18:26:57 0/0:41:5:1:4:69:7.25%:81:2.8994E-2:42:64:27:37:70 0/1:34:8:2:6:48:16.67%:25:2.8457E-3:41:40:19:21:50 0/0:60:1:0:1:39:2.56%:62:5E-1:47:38:16:22:39 0/0:33:2:0:2:34:5.88%:43:2.4627E-1:41:32:13:19:35 0/1:34:7:3:4:41:17.07%:22:5.9136E-3:41:34:16:18:41 0/0:40:6:4:2:42:14.29%:33:1.2905E-2:41:36:18:18:42 0/0:0:0:0:0:9:0%:18:1E0:43:9:3:6:9 0/0:43:4:2:2:38:10.53%:37:5.7534E-2:46:34:20:14:38 0/0:52:3:2:1:31:9.68%:34:1.1885E-1:47:28:11:17:31 0/0:47:6:2:4:25:24%:14:1.1145E-2:42:19:6:13:25 0/0:60:1:1:0:24:4.17%:34:5E-1:50:23:17:6:24 0/1:36:9:4:5:58:15.52%:28:1.3968E-3:38:49:22:27:59 0/0:45:5:1:4:36:13.89%:29:2.6944E-2:45:31:14:17:37 0/1:38:10:5:5:53:18.87%:32:6.1215E-4:42:43:19:24:54 0/0:48:2:1:1:31:6.45%:40:2.459E-1:45:29:14:15:32 0/0:40:4:1:3:35:11.43%:35:5.7106E-2:41:31:18:13:35 0/0:44:3:1:2:40:7.5%:46:1.2025E-1:41:37:24:13:41 0/1:41:9:3:6:49:18.37%:28:1.3055E-3:39:40:15:25:52 0/1:38:12:4:8:42:28.57%:40:9.7866E-5:44:30:17:13:43 0/0:35:6:0:6:49:12.24%:44:1.3285E-2:43:43:22:21:50 0/0:40:7:1:6:72:9.72%:71:6.7056E-3:40:65:30:35:73 0/0:36:5:3:2:34:14.71%:27:2.6693E-2:41:29:14:15:34 0/0:36:6:2:4:48:12.5%:41:1.3237E-2:38:42:19:23:49 0/0:35:5:2:3:34:14.71%:27:2.6693E-2:45:29:14:15:35 0/0:40:6:1:5:38:15.79%:28:1.2628E-2:43:32:21:11:39 0/1:39:7:4:3:54:12.96%:21:6.3515E-3:43:47:20:27:54 0/1:41:8:4:4:56:14.29%:25:2.9874E-3:42:48:33:15:58 0/1:35:7:2:5:60:11.67%:21:6.4922E-3:39:53:26:27:61 0/1:36:10:3:7:64:15.62%:31:6.6774E-4:41:54:29:25:64 0/1:40:14:7:7:73:19.18%:45:3.0676E-5:39:59:23:36:73 0/0:41:5:0:5:49:10.2%:50:2.8079E-2:41:44:14:30:52 0/0:37:5:3:2:45:11.11%:44:2.7799E-2:40:40:18:22:47 0/1:36:8:1:7:74:10.81%:24:3.2002E-3:42:66:28:38:74 0/0:35:6:3:3:47:12.77%:42:1.3188E-2:38:41:14:27:48 0/1:33:9:3:6:63:14.29%:28:1.4373E-3:39:54:23:31:65 0/0:36:5:3:2:56:8.93%:58:2.8473E-2:39:51:21:30:56 0/0:37:4:2:2:51:7.84%:59:5.8806E-2:39:47:15:32:51 0/0:33:5:2:3:36:13.89%:29:2.6944E-2:39:31:12:19:38 0/0:37:5:4:1:70:7.14%:80:2.9026E-2:39:65:32:33:70 0/1:40:7:1:6:55:12.73%:21:6.377E-3:43:48:28:20:57 0/1:37:9:5:4:55:16.36%:28:1.3694E-3:42:46:23:23:56 0/1:35:8:3:5:48:16.67%:25:2.8457E-3:44:40:16:24:48 0/0:42:4:1:3:68:5.88%:84:5.9733E-2:40:64:35:29:71 0/0:36:4:1:3:38:10.53%:37:5.7534E-2:38:34:18:16:38 0/1:36:7:0:7:53:13.21%:21:6.3251E-3:41:46:23:23:55 0/1:36:8:4:4:48:16.67%:25:2.8457E-3:39:40:22:18:48 0/1:34:7:4:3:51:13.73%:22:6.2693E-3:39:44:23:21:52 0/0:37:5:2:3:46:10.87%:44:2.7874E-2:38:41:25:16:48 0/1:39:10:3:7:54:18.52%:32:6.18E-4:40:44:19:25:54 0/0:40:6:2:4:41:14.63%:33:1.2841E-2:38:35:12:23:41 0/0:34:5:3:2:41:12.2%:38:2.7465E-2:42:36:16:20:42 0/0:36:6:4:2:45:13.33%:39:1.3082E-2:41:39:19:20:45 0/0:36:6:5:1:41:14.63%:33:1.2841E-2:39:35:18:17:42 0/0:34:6:1:5:36:16.67%:25:1.2467E-2:40:30:18:12:37 0/1:39:12:5:7:50:24%:39:1.1557E-4:43:38:22:16:52 0/1:36:10:6:4:38:26.32%:33:4.9525E-4:40:28:24:4:40 0/0:37:5:1:4:39:12.82%:35:2.7273E-2:40:34:22:12:40 0/0:42:3:0:3:38:7.89%:43:1.2E-1:45:35:19:16:39 0/0:35:5:3:2:42:11.9%:38:2.7555E-2:43:37:18:19:42 0/0:48:4:1:3:36:11.11%:34:5.7257E-2:44:32:19:13:36 0/0:34:2:0:2:23:8.7%:28:2.4444E-1:39:21:9:12:24 0/0:37:5:1:4:32:15.62%:24:2.6412E-2:40:27:17:10:33 0/0:43:2:0:2:31:6.45%:40:2.459E-1:43:29:17:12:31 0/0:43:6:2:4:48:12.5%:41:1.3237E-2:40:42:15:27:48 0/1:43:7:4:3:32:21.88%:22:5.4182E-3:40:25:10:15:32 0/0:48:4:0:4:38:10.53%:37:5.7534E-2:42:34:16:18:38 0/0:41:6:2:4:44:13.64%:36:1.3026E-2:40:38:19:19:44 0/0:45:5:0:5:43:11.63%:41:2.764E-2:41:38:19:19:43 0/1:35:7:4:3:40:17.5%:22:5.8688E-3:40:33:19:14:40 MTB_anc 335927 . A G . PASS AC=45;AF=0.150;AN=300;ANN=G|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.384T>C|p.Asn128Asn|384/2874|384/2874|128/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335927A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335927A>G||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:7:3:4:69:10.14%:21:6.659E-3:42:62:27:35:71 0/0:0:0:0:0:9:0%:18:1E0:42:9:1:8:10 0/0:41:5:5:0:40:12.5%:35:2.7371E-2:45:35:15:20:41 0/0:60:3:0:3:15:20%:11:1.1207E-1:41:12:3:9:16 0/0:44:3:1:2:33:9.09%:37:1.1923E-1:42:30:17:13:34 0/0:37:1:0:1:26:3.85%:38:5E-1:42:25:11:14:27 0/0:46:5:3:2:36:13.89%:29:2.6944E-2:47:31:15:16:36 0/0:40:4:1:3:30:13.33%:26:5.62E-2:41:26:8:18:31 0/1:43:7:1:6:42:16.67%:22:5.9563E-3:40:35:17:18:44 0/0:37:1:0:1:28:3.57%:41:5E-1:46:27:10:17:28 0/0:32:3:0:3:28:10.71%:28:1.1818E-1:43:25:16:9:28 0/1:38:9:4:5:61:14.75%:28:1.4219E-3:43:52:22:30:62 0/0:31:2:0:2:21:9.52%:25:2.439E-1:43:19:8:11:22 0/0:36:4:2:2:43:9.3%:47:5.8115E-2:43:39:18:21:45 0/0:38:6:2:4:37:16.22%:28:1.2549E-2:46:31:12:19:38 0/1:40:7:2:5:43:16.28%:22:5.9972E-3:40:36:9:27:43 0/0:35:2:1:1:22:9.09%:24:2.4419E-1:46:20:9:11:22 0/1:34:7:5:2:21:33.33%:23:4.3101E-3:40:14:2:12:21 0/0:38:1:1:0:16:6.25%:21:5E-1:46:15:11:4:18 0/0:45:3:1:2:24:12.5%:22:1.1702E-1:44:21:10:11:24 0/0:37:4:2:2:25:16%:21:5.4928E-2:45:21:12:9:25 0/1:40:8:2:6:58:13.79%:25:3.0172E-3:44:50:19:31:58 0/0:51:3:1:2:18:16.67%:14:1.1429E-1:40:15:9:6:18 0/0:46:2:0:2:29:6.9%:37:2.4561E-1:43:27:11:16:30 0/0:41:6:3:3:59:10.17%:59:1.3674E-2:42:53:26:27:60 0/0:44:6:4:2:39:15.38%:31:1.2702E-2:45:33:19:14:40 0/0:60:1:0:1:27:3.7%:41:5E-1:47:26:11:15:29 0/0:38:2:2:0:27:7.41%:34:2.4528E-1:44:25:6:19:27 0/1:39:9:3:6:52:17.31%:28:1.3391E-3:43:43:19:24:55 0/0:48:2:2:0:46:4.35%:63:2.4725E-1:39:44:18:26:46 0/0:42:4:3:1:47:8.51%:53:5.849E-2:43:43:22:21:50 0/1:39:8:1:7:43:18.6%:25:2.7329E-3:40:35:20:15:43 0/0:60:2:0:2:18:11.11%:18:2.4286E-1:48:16:9:7:18 0/0:49:2:2:0:28:7.14%:34:2.4545E-1:42:26:14:12:28 0/0:36:3:1:2:28:10.71%:28:1.1818E-1:48:25:12:13:29 0/0:40:5:3:2:68:7.35%:77:2.8961E-2:43:63:23:40:71 0/1:39:10:2:8:64:15.62%:31:6.6774E-4:44:54:27:27:64 0/0:35:5:4:1:57:8.77%:62:2.8522E-2:46:52:29:23:60 0/0:40:5:3:2:41:12.2%:38:2.7465E-2:45:36:17:19:41 0/0:46:5:2:3:48:10.42%:46:2.8014E-2:45:43:25:18:51 0/0:40:6:2:4:50:12%:44:1.3331E-2:43:44:16:28:52 0/1:41:7:2:5:58:12.07%:21:6.4484E-3:43:51:19:32:60 0/0:49:2:0:2:30:6.67%:37:2.4576E-1:46:28:12:16:32 0/0:37:3:1:2:33:9.09%:37:1.1923E-1:45:30:10:20:34 0/0:44:6:1:5:48:12.5%:41:1.3237E-2:42:42:15:27:51 0/0:47:4:2:2:57:7.02%:68:5.9196E-2:43:53:25:28:58 0/1:42:7:4:3:45:15.56%:22:6.0738E-3:46:38:19:19:47 0/0:45:6:2:4:60:10.17%:59:1.3674E-2:42:53:24:29:63 0/1:42:7:2:5:66:10.61%:21:6.6083E-3:41:59:29:30:67 0/0:42:4:3:1:39:10.26%:41:5.7662E-2:44:35:19:16:41 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:41:5:2:3:76:6.58%:90:2.9201E-2:42:71:35:36:79 0/0:38:3:2:1:30:10%:31:1.1864E-1:44:27:16:11:31 0/0:43:3:1:2:24:12.5%:22:1.1702E-1:46:21:12:9:24 0/0:46:5:0:5:41:12.2%:38:2.7465E-2:43:36:16:20:42 0/0:35:3:1:2:53:5.66%:69:1.2143E-1:40:50:21:29:58 0/1:38:8:4:4:59:13.56%:25:3.0313E-3:41:51:23:28:61 0/0:37:3:0:3:28:10.71%:28:1.1818E-1:41:25:9:16:28 0/1:50:7:2:5:58:12.07%:21:6.4484E-3:43:51:19:32:60 0/0:43:4:1:3:39:10.26%:41:5.7662E-2:47:35:22:13:40 0/0:37:4:1:3:32:12.5%:29:5.6596E-2:41:28:11:17:35 0/0:38:5:1:4:44:11.36%:41:2.7721E-2:43:39:17:22:44 0/0:35:3:1:2:51:5.88%:66:1.2129E-1:43:48:21:27:51 0/0:48:2:1:1:30:6.67%:37:2.4576E-1:43:28:14:14:30 0/1:41:8:1:7:46:17.39%:25:2.8033E-3:44:38:18:20:47 0/1:39:7:4:3:46:15.22%:22:6.1097E-3:48:39:18:21:48 0/0:44:6:2:4:35:17.14%:25:1.238E-2:43:29:16:13:36 0/1:48:8:3:5:50:16%:25:2.8851E-3:45:42:16:26:52 0/0:52:3:1:2:33:9.09%:37:1.1923E-1:45:30:11:19:33 0/0:43:4:1:3:19:21.05%:13:5.251E-2:44:15:6:9:19 0/0:31:3:0:3:32:9.38%:34:1.1905E-1:46:29:13:16:32 0/0:37:3:2:1:35:8.57%:40:1.1957E-1:48:32:17:15:38 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:12 0/0:43:3:1:2:37:8.11%:43:1.1986E-1:47:34:12:22:38 0/1:35:8:0:8:69:11.59%:25:3.1516E-3:43:61:32:29:71 0/0:43:4:2:2:42:9.52%:43:5.801E-2:42:38:15:23:42 0/0:45:6:3:3:60:10%:59:1.3706E-2:41:54:21:33:62 0/0:48:2:0:2:21:9.52%:25:2.439E-1:48:19:8:11:22 0/0:35:5:1:4:57:8.77%:62:2.8522E-2:40:52:20:32:57 0/1:42:8:3:5:46:17.39%:25:2.8033E-3:44:38:19:19:47 0/1:41:10:4:6:54:18.52%:32:6.18E-4:42:44:17:27:56 0/0:41:6:2:4:71:8.45%:77:1.3999E-2:43:65:28:37:72 0/1:35:9:2:7:52:17.31%:28:1.3391E-3:42:43:20:23:52 0/0:60:1:0:1:37:2.7%:59:5E-1:47:36:15:21:39 0/0:33:2:0:2:36:5.56%:47:2.4648E-1:41:34:14:20:36 0/1:37:7:3:4:40:17.5%:22:5.8688E-3:42:33:15:18:40 0/0:45:6:4:2:41:14.63%:33:1.2841E-2:42:35:17:18:41 0/0:0:0:0:0:10:0%:17:1E0:42:10:3:7:11 0/0:41:4:2:2:36:11.11%:34:5.7257E-2:46:32:18:14:37 0/0:52:3:2:1:32:9.38%:34:1.1905E-1:47:29:12:17:32 0/0:46:6:2:4:26:23.08%:13:1.1309E-2:42:20:6:14:26 0/0:60:1:1:0:25:4%:38:5E-1:50:24:18:6:25 0/1:37:9:4:5:58:15.52%:28:1.3968E-3:40:49:22:27:59 0/0:45:5:1:4:36:13.89%:29:2.6944E-2:46:31:15:16:36 0/1:38:10:5:5:52:19.23%:32:6.0611E-4:44:42:20:22:52 0/0:43:3:2:1:31:9.68%:34:1.1885E-1:46:28:13:15:32 0/0:42:4:1:3:34:11.76%:31:5.6946E-2:42:30:17:13:35 0/0:44:3:1:2:44:6.82%:53:1.2069E-1:40:41:27:14:44 0/1:40:9:3:6:50:18%:28:1.3171E-3:40:41:14:27:52 0/1:39:12:4:8:42:28.57%:40:9.7866E-5:44:30:17:13:43 0/0:35:6:0:6:47:12.77%:42:1.3188E-2:45:41:19:22:51 0/0:40:7:1:6:71:9.86%:71:6.6905E-3:40:64:26:38:76 0/0:37:5:3:2:33:15.15%:27:2.6557E-2:41:28:13:15:34 0/0:38:6:2:4:47:12.77%:42:1.3188E-2:39:41:17:24:52 0/0:36:5:2:3:33:15.15%:27:2.6557E-2:45:28:13:15:33 0/1:39:7:2:5:41:17.07%:22:5.9136E-3:43:34:22:12:41 0/1:40:7:4:3:54:12.96%:21:6.3515E-3:43:47:20:27:54 0/1:43:8:4:4:57:14.04%:25:3.0025E-3:42:49:33:16:58 0/1:35:7:2:5:58:12.07%:21:6.4484E-3:40:51:25:26:59 0/1:36:10:3:7:66:15.15%:31:6.7609E-4:42:56:30:26:67 0/1:41:13:7:6:71:18.31%:41:6.6777E-5:40:58:21:37:74 0/0:41:5:0:5:49:10.2%:50:2.8079E-2:42:44:15:29:51 0/0:36:6:4:2:46:13.04%:39:1.3136E-2:40:40:17:23:47 0/1:35:8:1:7:73:10.96%:24:3.1909E-3:43:65:27:38:74 0/0:37:4:2:2:45:8.89%:50:5.8311E-2:40:41:14:27:49 0/1:36:11:4:7:66:16.67%:35:3.1034E-4:39:55:24:31:66 0/0:35:5:3:2:56:8.93%:58:2.8473E-2:40:51:22:29:57 0/0:37:4:2:2:54:7.41%:62:5.9012E-2:40:50:15:35:54 0/0:32:6:2:4:37:16.22%:28:1.2549E-2:39:31:12:19:39 0/0:35:5:4:1:69:7.25%:81:2.8994E-2:40:64:31:33:70 0/1:39:8:1:7:56:14.29%:25:2.9874E-3:42:48:27:21:57 0/1:37:9:5:4:51:17.65%:28:1.3283E-3:43:42:19:23:56 0/1:34:8:3:5:48:16.67%:25:2.8457E-3:44:40:16:24:49 0/0:42:4:1:3:66:6.06%:81:5.9648E-2:40:62:31:31:69 0/0:34:4:1:3:34:11.76%:31:5.6946E-2:40:30:16:14:35 0/1:35:7:0:7:57:12.28%:21:6.4254E-3:41:50:24:26:58 0/1:36:7:4:3:50:14%:22:6.2398E-3:39:43:22:21:51 0/1:35:7:4:3:50:14%:22:6.2398E-3:40:43:22:21:50 0/0:35:6:3:3:46:13.04%:39:1.3136E-2:38:40:24:16:48 0/1:39:10:3:7:55:18.18%:32:6.2367E-4:40:45:19:26:56 0/0:40:6:2:4:42:14.29%:33:1.2905E-2:40:36:13:23:42 0/0:36:5:3:2:42:11.9%:38:2.7555E-2:41:37:15:22:44 0/0:36:6:4:2:45:13.33%:39:1.3082E-2:42:39:18:21:46 0/1:36:7:6:1:43:16.28%:22:5.9972E-3:38:36:18:18:43 0/0:35:6:1:5:37:16.22%:28:1.2549E-2:40:31:19:12:37 0/1:39:13:6:7:53:24.53%:42:5.2873E-5:44:40:23:17:53 0/1:37:11:6:5:42:26.19%:36:2.3046E-4:40:31:25:6:42 0/0:37:5:1:4:43:11.63%:41:2.764E-2:39:38:24:14:43 0/0:41:4:0:4:38:10.53%:37:5.7534E-2:46:34:18:16:40 0/0:35:5:3:2:43:11.63%:41:2.764E-2:43:38:18:20:43 0/0:48:4:1:3:36:11.11%:34:5.7257E-2:43:32:19:13:36 0/0:33:2:0:2:26:7.69%:30:2.451E-1:38:24:12:12:26 0/0:36:5:1:4:33:15.15%:27:2.6557E-2:39:28:18:10:34 0/0:48:3:0:3:31:9.68%:34:1.1885E-1:43:28:16:12:31 0/0:43:6:2:4:47:12.77%:42:1.3188E-2:40:41:16:25:47 0/1:43:7:4:3:31:22.58%:22:5.3469E-3:44:24:10:14:31 0/0:48:4:0:4:40:10%:40:5.7784E-2:42:36:16:20:40 0/0:41:6:2:4:44:13.64%:36:1.3026E-2:42:38:20:18:45 0/0:45:5:0:5:44:11.36%:41:2.7721E-2:40:39:19:20:44 0/0:36:6:3:3:41:14.63%:33:1.2841E-2:39:35:20:15:42 MTB_anc 335929 . T C . PASS AC=47;AF=0.157;AN=300;ANN=C|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.382A>G|p.Asn128Asp|382/2874|382/2874|128/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335929T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335929T>C||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:7:3:4:70:10%:21:6.675E-3:43:63:27:36:71 0/0:0:0:0:0:10:0%:17:1E0:40:10:1:9:10 0/0:41:5:5:0:41:12.2%:38:2.7465E-2:46:36:16:20:41 0/0:59:3:0:3:16:18.75%:11:1.129E-1:42:13:3:10:16 0/0:44:3:1:2:33:9.09%:37:1.1923E-1:42:30:16:14:33 0/0:37:1:0:1:27:3.7%:41:5E-1:43:26:12:14:27 0/0:46:5:3:2:36:13.89%:29:2.6944E-2:47:31:15:16:36 0/0:40:4:1:3:31:12.9%:29:5.6405E-2:42:27:8:19:31 0/1:40:9:1:8:42:21.43%:29:1.2112E-3:42:33:15:18:44 0/0:37:1:0:1:27:3.7%:41:5E-1:46:26:10:16:28 0/0:33:3:0:3:28:10.71%:28:1.1818E-1:44:25:16:9:28 0/1:38:9:4:5:61:14.75%:28:1.4219E-3:43:52:22:30:62 0/0:31:2:0:2:21:9.52%:25:2.439E-1:45:19:8:11:22 0/0:36:4:2:2:44:9.09%:46:5.8215E-2:42:40:19:21:45 0/0:40:6:2:4:37:16.22%:28:1.2549E-2:45:31:12:19:38 0/1:39:7:2:5:43:16.28%:22:5.9972E-3:40:36:9:27:43 0/0:36:2:1:1:22:9.09%:24:2.4419E-1:45:20:9:11:22 0/1:34:7:5:2:21:33.33%:23:4.3101E-3:39:14:2:12:21 0/0:35:2:1:1:18:11.11%:18:2.4286E-1:44:16:12:4:18 0/0:45:3:1:2:24:12.5%:22:1.1702E-1:44:21:10:11:24 0/0:37:4:2:2:24:16.67%:18:5.461E-2:47:20:11:9:25 0/1:39:9:2:7:61:14.75%:28:1.4219E-3:45:52:20:32:61 0/0:51:3:1:2:18:16.67%:14:1.1429E-1:42:15:9:6:18 0/0:48:2:0:2:30:6.67%:37:2.4576E-1:43:28:11:17:30 0/0:41:6:3:3:60:10%:59:1.3706E-2:42:54:26:28:60 0/0:44:6:4:2:39:15.38%:31:1.2702E-2:45:33:19:14:40 0/0:60:1:0:1:27:3.7%:41:5E-1:47:26:10:16:28 0/0:38:2:2:0:26:7.69%:30:2.451E-1:44:24:6:18:27 0/1:40:8:3:5:53:15.09%:25:2.9216E-3:45:44:19:25:57 0/0:49:2:2:0:46:4.35%:63:2.4725E-1:40:44:18:26:46 0/0:42:4:3:1:48:8.33%:52:5.8574E-2:44:44:23:21:50 0/1:40:8:1:7:43:18.6%:25:2.7329E-3:41:35:20:15:43 0/0:60:2:0:2:18:11.11%:18:2.4286E-1:49:16:9:7:18 0/0:49:2:2:0:27:7.41%:34:2.4528E-1:44:25:14:11:28 0/0:37:3:1:2:29:10.34%:31:1.1842E-1:48:26:13:13:29 0/0:40:5:3:2:68:7.35%:77:2.8961E-2:43:63:23:40:70 0/1:38:11:3:8:65:16.92%:35:3.0799E-4:45:54:27:27:66 0/0:35:5:4:1:58:8.62%:62:2.8569E-2:46:53:29:24:60 0/0:41:5:3:2:41:12.2%:38:2.7465E-2:45:36:16:20:41 0/0:46:5:2:3:49:10.2%:50:2.8079E-2:45:44:26:18:50 0/0:41:6:2:4:51:11.76%:47:1.3375E-2:43:45:18:27:53 0/1:44:7:2:5:54:12.96%:21:6.3515E-3:44:47:18:29:58 0/0:49:2:0:2:31:6.45%:40:2.459E-1:46:29:13:16:32 0/0:37:3:1:2:33:9.09%:37:1.1923E-1:46:30:9:21:34 0/0:44:6:1:5:51:11.76%:47:1.3375E-2:42:45:17:28:51 0/0:48:4:2:2:59:6.78%:72:5.9309E-2:43:55:26:29:59 0/1:43:7:4:3:46:15.22%:22:6.1097E-3:45:39:20:19:48 0/1:42:7:3:4:62:11.48%:21:6.5131E-3:42:54:24:30:64 0/1:45:7:2:5:65:10.77%:21:6.5904E-3:42:58:28:30:67 0/0:42:4:3:1:40:10%:40:5.7784E-2:45:36:20:16:41 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:41:5:2:3:76:6.58%:90:2.9201E-2:43:71:35:36:79 0/0:38:3:2:1:29:10.34%:31:1.1842E-1:46:26:16:10:31 0/0:41:3:1:2:24:12.5%:22:1.1702E-1:47:21:12:9:24 0/0:46:5:0:5:40:12.5%:35:2.7371E-2:43:35:15:20:42 0/0:35:3:1:2:54:5.56%:69:1.215E-1:41:51:21:30:56 0/1:39:8:4:4:57:14.04%:25:3.0025E-3:42:49:21:28:59 0/0:33:3:0:3:28:10.71%:28:1.1818E-1:42:25:9:16:28 0/1:50:7:2:5:60:11.67%:21:6.4922E-3:43:53:20:33:60 0/0:43:4:1:3:43:9.3%:47:5.8115E-2:46:39:24:15:43 0/0:33:4:1:3:35:11.43%:35:5.7106E-2:42:31:13:18:35 0/0:38:5:1:4:45:11.11%:44:2.7799E-2:43:40:17:23:45 0/0:37:3:1:2:50:6%:62:1.2121E-1:44:47:21:26:51 0/0:49:2:1:1:29:6.9%:37:2.4561E-1:44:27:14:13:30 0/1:41:8:1:7:46:17.39%:25:2.8033E-3:44:38:19:19:48 0/1:40:7:4:3:47:14.89%:22:6.1442E-3:48:40:20:20:48 0/0:43:6:2:4:36:16.67%:25:1.2467E-2:44:30:17:13:36 0/1:48:8:3:5:53:15.09%:25:2.9389E-3:45:45:16:29:53 0/0:52:3:1:2:33:9.09%:37:1.1923E-1:45:30:11:19:33 0/0:39:5:2:3:20:25%:10:2.3562E-2:44:15:6:9:20 0/0:34:3:0:3:30:10%:31:1.1864E-1:47:27:12:15:30 0/0:37:3:2:1:34:8.82%:37:1.194E-1:49:31:17:14:37 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:12 0/0:42:3:1:2:37:8.11%:43:1.1986E-1:47:34:12:22:38 0/1:35:8:0:8:69:11.59%:25:3.1516E-3:43:61:33:28:71 0/0:43:4:2:2:43:9.3%:47:5.8115E-2:42:39:15:24:43 0/0:45:6:3:3:60:10%:59:1.3706E-2:41:54:20:34:61 0/0:42:3:1:2:22:13.64%:19:1.1628E-1:47:19:8:11:22 0/0:35:5:1:4:55:9.09%:59:2.8423E-2:41:50:18:32:55 0/1:40:9:3:6:47:19.15%:28:1.2811E-3:44:38:19:19:47 0/1:43:10:4:6:54:18.52%:32:6.18E-4:43:44:17:27:56 0/0:40:7:3:4:74:9.46%:74:6.7346E-3:43:67:28:39:74 0/1:35:9:2:7:51:17.65%:28:1.3283E-3:42:42:19:23:51 0/0:60:1:0:1:38:2.63%:58:5E-1:47:37:15:22:39 0/0:30:2:0:2:37:5.41%:50:2.4658E-1:41:35:15:20:37 0/1:37:7:3:4:39:17.95%:22:5.8219E-3:42:32:14:18:40 0/0:45:6:4:2:41:14.63%:33:1.2841E-2:43:35:18:17:42 0/0:37:1:0:1:11:9.09%:14:5E-1:48:10:3:7:11 0/0:45:3:2:1:36:8.33%:40:1.1972E-1:47:33:19:14:37 0/0:52:3:2:1:31:9.68%:34:1.1885E-1:48:28:11:17:32 0/0:48:6:2:4:27:22.22%:16:1.1461E-2:42:21:7:14:27 0/0:60:1:1:0:26:3.85%:38:5E-1:50:25:19:6:26 0/1:37:10:4:6:57:17.54%:31:6.345E-4:40:47:20:27:60 0/0:46:5:1:4:36:13.89%:29:2.6944E-2:46:31:15:16:37 0/1:38:10:5:5:51:19.61%:32:5.9987E-4:45:41:19:22:51 0/0:45:3:2:1:31:9.68%:34:1.1885E-1:47:28:13:15:32 0/0:38:5:1:4:35:14.29%:30:2.6822E-2:43:30:17:13:35 0/0:44:3:1:2:43:6.98%:53:1.2059E-1:41:40:26:14:44 0/1:42:9:3:6:49:18.37%:28:1.3055E-3:41:40:15:25:52 0/1:39:12:4:8:41:29.27%:40:9.5339E-5:44:29:15:14:43 0/0:35:6:0:6:50:12%:44:1.3331E-2:45:44:21:23:51 0/0:40:7:1:6:71:9.86%:71:6.6905E-3:40:64:29:35:73 0/0:37:5:3:2:33:15.15%:27:2.6557E-2:41:28:14:14:34 0/1:39:7:2:5:51:13.73%:22:6.2693E-3:38:44:17:27:53 0/0:36:4:1:3:32:12.5%:29:5.6596E-2:45:28:13:15:33 0/0:41:6:1:5:39:15.38%:31:1.2702E-2:45:33:21:12:41 0/1:37:7:4:3:56:12.5%:21:6.4016E-3:43:49:20:29:56 0/1:43:8:4:4:58:13.79%:25:3.0172E-3:43:50:34:16:59 0/1:35:7:2:5:59:11.86%:21:6.4707E-3:41:52:26:26:59 0/1:37:10:3:7:67:14.93%:31:6.8011E-4:43:57:31:26:67 0/1:41:14:7:7:73:19.18%:45:3.0676E-5:40:59:23:36:73 0/0:41:5:0:5:50:10%:49:2.8142E-2:41:45:16:29:52 0/0:36:6:4:2:46:13.04%:39:1.3136E-2:40:40:17:23:46 0/1:35:9:2:7:75:12%:28:1.5142E-3:42:66:29:37:76 0/0:36:6:3:3:48:12.5%:41:1.3237E-2:39:42:14:28:50 0/1:36:11:4:7:66:16.67%:35:3.1034E-4:39:55:24:31:66 0/0:36:5:3:2:55:9.09%:59:2.8423E-2:40:50:21:29:56 0/0:37:4:2:2:55:7.27%:65:5.9076E-2:39:51:16:35:55 0/0:31:6:2:4:41:14.63%:33:1.2841E-2:38:35:14:21:41 0/0:37:5:4:1:70:7.14%:80:2.9026E-2:41:65:32:33:70 0/1:39:8:1:7:56:14.29%:25:2.9874E-3:43:48:27:21:58 0/1:37:9:5:4:53:16.98%:28:1.3495E-3:45:44:22:22:55 0/1:36:8:3:5:46:17.39%:25:2.8033E-3:45:38:15:23:49 0/0:40:4:1:3:66:6.06%:81:5.9648E-2:41:62:32:30:69 0/0:37:4:1:3:35:11.43%:35:5.7106E-2:40:31:17:14:35 0/1:35:8:1:7:57:14.04%:25:3.0025E-3:42:49:23:26:58 0/1:37:8:4:4:47:17.02%:25:2.8249E-3:40:39:20:19:51 0/1:36:7:4:3:50:14%:22:6.2398E-3:41:43:22:21:50 0/0:35:6:3:3:48:12.5%:41:1.3237E-2:39:42:25:17:48 0/1:40:10:3:7:54:18.52%:32:6.18E-4:40:44:19:25:54 0/0:39:6:2:4:42:14.29%:33:1.2905E-2:40:36:13:23:42 0/0:36:5:3:2:43:11.63%:41:2.764E-2:42:38:17:21:44 0/0:37:6:4:2:46:13.04%:39:1.3136E-2:42:40:19:21:46 0/1:37:7:6:1:46:15.22%:22:6.1097E-3:39:39:19:20:46 0/0:35:5:1:4:36:13.89%:29:2.6944E-2:41:31:19:12:37 0/1:38:13:6:7:53:24.53%:42:5.2873E-5:44:40:23:17:53 0/1:37:11:6:5:43:25.58%:36:2.3512E-4:40:32:26:6:43 0/0:37:5:1:4:44:11.36%:41:2.7721E-2:39:39:24:15:44 0/0:39:4:0:4:40:10%:40:5.7784E-2:46:36:20:16:41 0/0:34:5:3:2:44:11.36%:41:2.7721E-2:43:39:19:20:44 0/0:48:4:1:3:36:11.11%:34:5.7257E-2:44:32:19:13:36 0/0:34:2:0:2:25:8%:31:2.449E-1:39:23:11:12:25 0/0:37:5:1:4:33:15.15%:27:2.6557E-2:40:28:18:10:33 0/0:49:3:0:3:31:9.68%:34:1.1885E-1:44:28:16:12:31 0/0:42:6:2:4:47:12.77%:42:1.3188E-2:40:41:16:25:47 0/1:43:7:4:3:31:22.58%:22:5.3469E-3:42:24:10:14:31 0/0:48:4:0:4:39:10.26%:41:5.7662E-2:42:35:15:20:39 0/0:39:6:2:4:43:13.95%:36:1.2967E-2:42:37:19:18:44 0/0:46:5:0:5:44:11.36%:41:2.7721E-2:42:39:18:21:45 0/1:35:7:4:3:42:16.67%:22:5.9563E-3:40:35:20:15:42 MTB_anc 335936 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.375C>T|p.Thr125Thr|375/2874|375/2874|125/957||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335936G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335936G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:72:0%:99:1E0:42:72:31:41:73 0/0:0:0:0:0:10:0%:17:1E0:41:10:1:9:10 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:40 0/0:0:0:0:0:16:0%:29:1E0:47:16:3:13:16 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:9:22:31 0/0:0:0:0:0:46:0%:85:1E0:41:46:18:28:46 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:62:0%:99:1E0:43:62:26:36:63 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:22 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:50 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:42 0/0:0:0:0:0:44:0%:81:1E0:40:44:12:32:44 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:22 0/0:0:0:0:0:18:0%:32:1E0:44:18:13:5:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:63:0%:99:1E0:44:63:23:40:63 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:29 0/0:0:0:0:0:64:0%:99:1E0:42:64:30:34:64 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:43 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:29 0/0:0:0:0:0:58:0%:99:1E0:44:58:24:34:61 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:46 0/0:0:0:0:0:56:0%:99:1E0:43:56:28:28:57 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:49 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:68:0%:99:1E0:43:68:25:43:69 0/0:0:0:0:0:66:0%:99:1E0:44:66:31:35:67 0/0:0:0:0:0:61:0%:99:1E0:46:61:36:25:64 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:41 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:55 0/0:0:0:0:0:52:0%:96:1E0:42:52:19:33:53 0/0:0:0:0:0:61:0%:99:1E0:44:61:23:38:63 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:38 0/1:49:12:4:8:33:36.36%:41:7.2075E-5:42:21:6:15:34 0/0:0:0:0:0:51:0%:97:1E0:43:51:18:33:51 0/0:0:0:0:0:63:0%:99:1E0:44:63:29:34:64 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:51 0/0:0:0:0:0:65:0%:99:1E0:42:65:31:34:66 0/0:0:0:0:0:70:0%:99:1E0:42:70:32:38:71 0/0:0:0:0:0:42:0%:77:1E0:46:42:25:17:43 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:80:0%:99:1E0:42:80:39:41:82 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:32 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:24 0/0:0:0:0:0:45:0%:85:1E0:42:45:17:28:45 0/0:0:0:0:0:60:0%:99:1E0:40:60:25:35:62 0/0:0:0:0:0:60:0%:99:1E0:42:60:28:32:62 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:60:0%:99:1E0:44:60:21:39:62 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:45 0/0:0:0:0:0:54:0%:99:1E0:43:54:23:31:54 0/0:60:1:1:0:31:3.23%:48:5E-1:43:30:14:16:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:21:28:49 0/0:0:0:0:0:50:0%:92:1E0:48:50:23:27:50 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:37 0/0:0:0:0:0:52:0%:96:1E0:47:52:17:35:52 0/0:0:0:0:0:35:0%:67:1E0:46:35:13:22:35 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:36 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:38 0/0:0:0:0:0:13:0%:25:1E0:47:13:7:6:13 0/0:0:0:0:0:40:0%:74:1E0:47:40:14:26:41 0/0:0:0:0:0:74:0%:99:1E0:41:74:36:38:75 0/0:38:1:1:0:47:2.13%:73:5E-1:42:45:18:27:47 0/0:0:0:0:0:64:0%:99:1E0:41:64:26:38:64 0/0:0:0:0:0:24:0%:44:1E0:49:24:11:13:24 0/0:0:0:0:0:58:0%:99:1E0:41:58:22:36:58 0/0:0:0:0:0:50:0%:92:1E0:44:50:22:28:51 0/0:0:0:0:0:56:0%:99:1E0:43:56:23:33:58 0/0:0:0:0:0:78:0%:99:1E0:43:78:35:43:78 0/0:0:0:0:0:52:0%:96:1E0:40:52:22:30:53 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:41 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:37:1:0:1:47:2.13%:77:5E-1:42:46:23:23:47 0/0:0:0:0:0:13:0%:25:1E0:47:13:3:10:13 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:27:0%:52:1E0:50:27:21:6:27 0/0:0:0:0:0:62:0%:99:1E0:39:62:26:36:63 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:54:0%:99:1E0:43:54:25:29:54 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:39 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:44 0/0:0:0:0:0:53:0%:99:1E0:40:53:18:35:55 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:52:0%:96:1E0:43:52:22:30:53 0/0:0:0:0:0:74:0%:99:1E0:40:74:27:47:74 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:57:0%:99:1E0:38:57:22:35:57 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:44 0/0:0:0:0:0:59:0%:99:1E0:42:59:27:32:60 0/0:0:0:0:0:60:0%:99:1E0:42:60:39:21:61 0/0:0:0:0:0:62:0%:99:1E0:41:62:28:34:63 0/0:0:0:0:0:71:0%:99:1E0:41:71:35:36:71 0/0:0:0:0:0:76:0%:99:1E0:40:76:31:45:77 0/0:37:1:1:0:56:1.79%:91:5E-1:42:55:18:37:58 0/0:0:0:0:0:49:0%:93:1E0:38:49:23:26:50 0/0:0:0:0:0:79:0%:99:1E0:42:79:34:45:83 0/0:0:0:0:0:55:0%:99:1E0:39:55:21:34:56 0/0:0:0:0:0:67:0%:99:1E0:39:67:27:40:69 0/0:0:0:0:0:59:0%:99:1E0:39:59:25:34:60 0/0:0:0:0:0:61:0%:99:1E0:39:61:17:44:62 0/0:0:0:0:0:40:0%:74:1E0:38:40:15:25:41 0/0:0:0:0:0:73:0%:99:1E0:40:73:39:34:73 0/0:0:0:0:0:62:0%:99:1E0:41:62:29:33:62 0/0:0:0:0:0:55:0%:99:1E0:42:55:27:28:56 0/0:0:0:0:0:51:0%:97:1E0:43:51:21:30:53 0/0:32:1:0:1:72:1.39%:99:5E-1:40:71:35:36:74 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:62:0%:99:1E0:40:62:29:33:63 0/0:0:0:0:0:55:0%:99:1E0:39:55:27:28:55 0/0:0:0:0:0:53:0%:99:1E0:40:53:28:25:53 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:48 0/0:0:0:0:0:56:0%:99:1E0:40:56:23:33:56 0/0:0:0:0:0:44:0%:81:1E0:40:44:18:26:45 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:46 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:47 0/0:0:0:0:0:49:0%:93:1E0:38:49:26:23:49 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:55:0%:99:1E0:42:55:30:25:55 0/0:0:0:0:0:47:0%:89:1E0:39:47:32:15:49 0/0:0:0:0:0:48:0%:89:1E0:39:48:28:20:48 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:42 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:50 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:36 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:49 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:40 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:48 0/0:0:0:0:0:46:0%:85:1E0:40:46:27:19:46 MTB_anc 335971 . A G . PASS AC=116;AF=0.387;AN=300;ANN=G|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.340T>C|p.Leu114Leu|340/2874|340/2874|114/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.335971A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.335971A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:9:3:6:72:12.5%:28:1.4972E-3:42:63:26:37:74 0/0:0:0:0:0:10:0%:17:1E0:41:10:1:9:10 0/1:48:17:10:7:42:40.48%:60:9.9678E-7:45:25:13:12:42 0/0:54:4:1:3:26:15.38%:20:5.5222E-2:44:22:9:13:26 0/1:49:15:10:5:38:39.47%:52:5.4463E-6:42:23:9:14:38 0/1:42:10:4:6:27:37.04%:34:3.5253E-4:43:17:7:10:29 0/0:48:6:3:3:40:15%:30:1.2773E-2:49:34:18:16:41 0/1:42:10:4:6:38:26.32%:33:4.9525E-4:42:28:10:18:38 0/1:41:9:1:8:48:18.75%:28:1.2935E-3:42:39:17:22:48 0/0:52:6:2:4:42:14.29%:33:1.2841E-2:47:35:15:20:42 0/1:47:19:9:10:43:44.19%:68:1.4658E-7:43:24:17:7:43 0/1:40:8:3:5:67:11.94%:25:3.1302E-3:43:59:25:34:72 0/0:37:3:1:2:24:12.5%:22:1.1702E-1:48:21:9:12:26 0/0:40:6:3:3:58:10.34%:56:1.3641E-2:42:52:24:28:59 0/1:48:21:8:13:43:48.84%:77:1.8298E-8:44:22:6:16:44 0/1:42:21:8:13:51:41.18%:74:3.5259E-8:42:30:6:24:51 0/0:43:4:2:2:27:14.81%:23:5.5494E-2:43:23:9:14:27 0/1:36:8:5:3:24:33.33%:27:1.949E-3:41:16:6:10:25 0/1:42:9:5:4:22:40.91%:31:7.0165E-4:47:13:9:4:23 0/1:50:9:4:5:25:36%:30:8.1542E-4:46:16:6:10:27 0/1:42:15:6:9:32:46.88%:54:3.5464E-6:42:17:10:7:33 0/1:42:12:5:7:74:16.22%:38:1.5045E-4:43:62:23:39:76 0/0:47:4:1:3:23:17.39%:18:5.4264E-2:45:19:10:9:23 0/0:53:4:1:3:32:12.5%:29:5.6596E-2:43:28:10:18:32 0/1:43:11:4:7:67:16.42%:35:3.1263E-4:43:56:28:28:67 0/1:45:32:18:14:55:58.18%:99:3.5017E-13:47:23:11:12:56 0/0:45:2:0:2:34:5.88%:43:2.4627E-1:47:32:12:20:36 0/1:43:9:3:6:34:26.47%:29:1.0644E-3:41:25:8:17:35 0/1:42:12:4:8:56:21.43%:38:1.2642E-4:46:44:20:24:61 0/1:42:22:11:11:53:41.51%:78:1.5031E-8:40:31:12:19:54 0/0:45:6:5:1:59:10.17%:59:1.3674E-2:43:53:23:30:62 0/1:42:31:14:17:50:62%:99:4.5844E-13:40:19:10:9:51 0/1:48:10:7:3:24:41.67%:35:2.9985E-4:49:14:7:7:24 0/0:41:4:2:2:37:10.81%:38:5.7399E-2:43:33:18:15:38 0/1:44:15:9:6:32:46.88%:54:3.5464E-6:49:17:8:9:32 0/0:40:6:3:3:74:8.11%:80:1.4064E-2:42:68:27:41:77 0/1:44:13:4:9:68:19.12%:41:6.4842E-5:44:55:26:29:70 0/0:39:6:4:2:70:8.57%:74:1.3976E-2:48:64:33:31:75 0/1:50:12:5:7:46:26.09%:39:1.0724E-4:47:34:15:19:46 0/1:40:11:3:8:65:16.92%:35:3.0799E-4:44:54:26:28:67 0/1:41:24:7:17:58:41.38%:85:2.9186E-9:43:34:16:18:59 0/1:44:10:4:6:62:16.13%:31:6.5891E-4:44:52:23:29:64 0/0:49:5:0:5:39:12.82%:35:2.7273E-2:44:34:14:20:40 0/0:42:5:2:3:42:11.9%:38:2.7555E-2:43:37:13:24:43 0/1:42:26:10:16:60:43.33%:93:4.5813E-10:41:34:11:23:61 0/0:51:6:3:3:66:9.09%:68:1.3877E-2:44:60:26:34:68 0/1:47:20:13:7:51:39.22%:70:9.3266E-8:45:31:14:17:53 0/1:41:10:6:4:67:14.93%:31:6.8011E-4:43:57:27:30:69 0/1:41:17:6:11:84:20.24%:55:3.1036E-6:43:67:34:33:84 0/0:45:6:5:1:48:12.5%:41:1.3237E-2:48:42:24:18:51 0/0:49:1:1:0:23:4.35%:34:5E-1:44:22:10:12:24 0/1:43:27:15:12:87:31.03%:91:6.8092E-10:42:60:26:34:88 0/0:43:4:2:2:29:13.79%:26:5.5981E-2:46:25:14:11:30 0/0:48:4:2:2:27:14.81%:23:5.5494E-2:47:23:13:10:27 0/1:44:7:1:6:43:16.28%:22:5.9972E-3:42:36:16:20:45 0/1:37:9:4:5:69:13.04%:28:1.4788E-3:42:60:25:35:74 0/1:40:12:7:5:67:17.91%:38:1.4234E-4:44:55:22:33:71 0/1:40:11:4:7:30:36.67%:37:1.594E-4:42:19:6:13:32 0/1:48:10:3:7:71:14.08%:31:6.9515E-4:43:61:24:37:71 0/0:42:5:2:3:50:10%:49:2.8142E-2:47:45:26:19:50 0/1:38:23:8:15:42:54.76%:87:1.7689E-9:45:19:11:8:43 0/1:38:9:3:6:51:17.65%:28:1.3283E-3:42:42:17:25:51 0/0:34:4:1:3:60:6.67%:71:5.9362E-2:44:56:25:31:61 0/0:48:6:3:3:31:19.35%:20:1.1977E-2:43:25:12:13:31 0/1:45:19:9:10:49:38.78%:66:2.1763E-7:44:30:13:17:50 0/1:42:15:9:6:54:27.78%:50:9.8829E-6:46:39:19:20:55 0/1:51:20:11:9:44:45.45%:72:5.7286E-8:42:24:12:12:44 0/1:49:14:6:8:62:22.58%:45:2.6327E-5:45:47:15:32:64 0/0:47:4:1:3:37:10.81%:38:5.7399E-2:44:33:13:20:38 0/0:41:6:3:3:27:22.22%:16:1.1461E-2:49:21:9:12:27 0/0:40:6:1:5:40:15%:30:1.2773E-2:48:34:15:19:42 0/1:46:14:6:8:41:34.15%:47:1.6028E-5:47:27:14:13:42 0/0:60:1:1:0:16:6.25%:21:5E-1:48:15:8:7:17 0/1:52:13:5:8:43:30.23%:43:4.2025E-5:48:30:11:19:44 0/1:41:35:18:17:86:40.7%:99:3.6681E-13:41:51:27:24:87 0/1:44:11:5:6:51:21.57%:35:2.6733E-4:42:40:15:25:54 0/1:42:10:5:5:67:14.93%:31:6.8011E-4:42:57:21:36:67 0/0:50:5:2:3:29:17.24%:22:2.5917E-2:51:24:12:12:29 0/1:43:23:13:10:65:35.38%:79:1.1134E-8:40:42:13:29:67 0/1:41:10:4:6:52:19.23%:32:6.0611E-4:41:42:19:23:52 0/1:47:11:5:6:58:18.97%:35:2.8966E-4:42:47:20:27:61 0/1:44:37:18:19:87:42.53%:99:5.4067E-14:42:50:21:29:90 0/1:41:14:5:9:63:22.22%:45:2.713E-5:42:49:24:25:64 0/1:47:13:7:6:44:29.55%:43:4.324E-5:44:31:11:20:44 0/1:43:20:8:12:48:41.67%:71:7.7415E-8:42:28:10:18:49 0/1:42:18:7:11:50:36%:62:5.8874E-7:39:32:17:15:52 0/1:42:18:11:7:49:36.73%:62:5.6162E-7:43:31:14:17:52 0/0:37:2:0:2:17:11.76%:18:2.4242E-1:46:15:7:8:17 0/1:47:12:6:6:43:27.91%:40:9.2733E-5:44:28:16:12:43 0/0:54:4:2:2:37:10.81%:38:5.7399E-2:49:33:15:18:38 0/1:51:11:4:7:33:33.33%:37:1.8019E-4:42:22:9:13:33 0/0:60:1:1:0:34:2.94%:51:5E-1:51:33:25:8:34 0/1:36:14:5:9:69:20.29%:45:2.9344E-5:41:55:25:30:70 0/0:48:6:1:5:39:15.38%:31:1.2702E-2:47:33:15:18:40 0/1:38:13:6:7:57:22.81%:42:5.6497E-5:41:44:21:23:58 0/0:40:5:2:3:37:13.51%:32:2.706E-2:45:32:14:18:37 0/1:38:17:8:9:47:36.17%:58:1.3018E-6:42:30:16:14:48 0/1:44:13:6:7:44:29.55%:43:4.324E-5:43:31:19:12:45 0/1:39:28:10:18:61:45.9%:99:6.4366E-11:40:33:11:22:62 0/1:41:25:12:13:49:51.02%:93:4.6489E-10:43:24:11:13:51 0/1:43:24:12:12:55:43.64%:86:2.3553E-9:42:31:12:19:57 0/1:42:31:10:21:76:40.79%:99:9.7292E-12:43:45:16:29:77 0/1:42:16:8:8:41:39.02%:56:2.4696E-6:38:25:11:14:42 0/1:39:30:14:16:56:53.57%:99:4.2444E-12:38:26:11:15:62 0/1:44:15:8:7:33:45.45%:54:3.8647E-6:46:18:9:9:35 0/1:45:22:9:13:49:44.9%:79:1.1173E-8:46:27:18:9:50 0/1:44:33:19:14:64:51.56%:99:4.1337E-13:42:31:13:18:66 0/1:46:16:11:5:63:25.4%:52:5.1326E-6:41:47:29:18:64 0/1:42:27:10:17:62:43.55%:97:1.9451E-10:41:35:18:17:64 0/1:40:34:15:19:75:45.33%:99:4.4044E-13:42:41:23:18:76 0/1:41:30:16:14:74:40.54%:99:2.2803E-11:41:44:16:28:76 0/1:41:29:9:20:63:46.03%:99:2.7231E-11:41:34:15:19:65 0/1:40:21:12:9:54:38.89%:73:4.2301E-8:41:33:17:16:56 0/1:42:33:17:16:81:40.74%:99:1.8891E-12:43:48:21:27:82 0/1:41:22:10:12:64:34.38%:75:2.6845E-8:37:42:15:27:66 0/1:37:32:8:24:72:44.44%:99:2.6699E-12:41:40:20:20:73 0/1:41:25:9:16:60:41.67%:89:1.2435E-9:36:35:15:20:62 0/1:42:16:8:8:57:28.07%:53:4.4899E-6:41:41:10:31:61 0/1:39:24:8:16:44:54.55%:91:7.4746E-10:38:20:9:11:46 0/1:39:29:16:13:80:36.25%:99:8.2907E-11:41:51:26:25:80 0/1:42:25:11:14:68:36.76%:87:1.9778E-9:39:43:21:22:68 0/1:39:19:13:6:62:30.65%:64:3.74E-7:44:43:14:29:65 0/1:39:31:13:18:57:54.39%:99:1.5588E-12:41:26:12:14:58 0/1:42:30:15:15:79:37.97%:99:3.0602E-11:38:49:22:27:80 0/1:39:15:6:9:37:40.54%:52:5.1339E-6:37:22:11:11:40 0/1:38:25:8:17:66:37.88%:87:1.7848E-9:40:41:19:22:70 0/1:37:32:16:16:59:54.24%:99:6.5868E-13:39:27:13:14:59 0/1:42:22:15:7:56:39.29%:77:1.8121E-8:40:34:16:18:61 0/1:36:18:7:11:49:36.73%:62:5.6162E-7:42:31:19:12:50 0/1:39:26:10:16:58:44.83%:94:3.9115E-10:40:32:14:18:59 0/1:38:26:13:13:59:44.07%:93:4.2407E-10:39:33:10:23:60 0/1:38:21:10:11:52:40.38%:74:3.7578E-8:38:31:13:18:54 0/1:41:20:12:8:50:40%:70:8.793E-8:39:30:11:19:53 0/1:40:24:17:7:54:44.44%:86:2.1774E-9:36:30:12:18:55 0/1:35:10:3:7:38:26.32%:33:4.9525E-4:43:28:17:11:41 0/1:43:27:18:9:59:45.76%:98:1.5211E-10:41:32:15:17:59 0/1:36:16:7:9:54:29.63%:53:4.1444E-6:39:38:30:8:56 0/1:38:9:4:5:53:16.98%:28:1.3495E-3:43:44:23:21:56 0/1:42:7:3:4:46:15.22%:22:6.1097E-3:48:39:21:18:47 0/1:39:19:10:9:56:33.93%:65:3.0264E-7:43:37:17:20:58 0/1:45:13:6:7:37:35.14%:44:3.404E-5:39:24:11:13:38 0/1:36:11:5:6:27:40.74%:38:1.362E-4:38:16:7:9:29 0/1:39:11:5:6:32:34.38%:37:1.7351E-4:39:21:11:10:32 0/1:50:8:2:6:33:24.24%:26:2.4173E-3:43:25:14:11:34 0/1:41:20:4:16:55:36.36%:69:1.1494E-7:41:35:16:19:55 0/1:41:14:6:8:30:46.67%:50:8.3837E-6:41:16:7:9:30 0/1:43:14:4:10:44:31.82%:47:1.7873E-5:42:30:12:18:44 0/1:41:18:11:7:45:40%:63:4.5278E-7:44:27:11:16:47 0/1:42:9:3:6:52:17.31%:28:1.3391E-3:45:43:21:22:52 0/1:37:9:5:4:49:18.37%:28:1.3055E-3:43:40:23:17:52 MTB_anc 336005 . A G . PASS AC=168;AF=0.560;AN=300;ANN=G|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.306T>C|p.Ile102Ile|306/2874|306/2874|102/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336005A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336005A>G||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:67:30:37:81:82.72%:99:5.5861E-32:42:14:4:10:82 1/1:47:12:3:9:13:92.31%:58:1.3461E-6:60:1:0:1:13 0/1:47:41:22:19:48:85.42%:99:3.1535E-20:45:7:5:2:48 0/1:48:23:11:12:27:85.19%:99:1.6161E-11:49:4:1:3:28 0/1:44:35:19:16:40:87.5%:99:1.1364E-17:48:5:2:3:40 0/1:45:26:13:13:33:78.79%:99:2.5824E-12:43:7:3:4:34 0/1:50:34:19:15:41:82.93%:99:1.7333E-16:49:7:4:3:41 0/1:43:32:12:20:39:82.05%:99:1.9666E-15:44:7:4:3:39 0/1:44:42:20:22:52:80.77%:99:6.7918E-20:46:10:2:8:52 0/1:53:32:14:18:40:80%:99:3.51E-15:50:8:3:5:40 0/1:47:42:25:17:48:87.5%:99:4.0135E-21:45:6:2:4:50 0/1:42:58:26:32:67:86.57%:99:9.5086E-29:38:9:4:5:69 0/1:50:21:10:11:27:77.78%:92:5.6888E-10:48:6:3:3:28 0/1:41:57:25:32:65:87.69%:99:1.414E-28:38:8:4:4:65 0/1:47:42:15:27:50:84%:99:1.8999E-20:43:8:2:6:53 0/1:44:45:17:28:52:86.54%:99:2.155E-22:47:7:3:4:52 0/1:42:26:11:15:30:86.67%:99:3.9214E-13:42:4:2:2:30 0/1:43:12:6:6:23:52.17%:44:3.4748E-5:35:11:6:5:23 0/1:43:26:17:9:33:78.79%:99:2.5824E-12:36:7:6:1:33 0/1:45:31:14:17:37:83.78%:99:3.4914E-15:44:6:2:4:37 0/1:45:30:17:13:38:78.95%:99:3.7857E-14:36:8:2:6:38 0/1:44:67:26:41:78:85.9%:99:6.2685E-33:43:11:5:6:80 0/1:48:24:11:13:28:85.71%:99:4.7015E-12:47:4:1:3:28 0/1:46:32:13:19:36:88.89%:99:2.0653E-16:53:4:1:3:38 0/1:43:60:31:29:70:85.71%:99:1.7549E-29:43:10:4:6:70 0/1:46:51:29:22:63:80.95%:99:4.3288E-24:46:12:6:6:63 1/1:46:32:13:19:35:91.43%:99:7.5196E-17:52:3:1:2:38 0/1:42:26:10:16:32:81.25%:99:1.5064E-12:43:6:2:4:32 0/1:44:42:19:23:53:79.25%:99:1.1855E-19:43:11:4:7:54 1/1:41:54:25:29:59:91.53%:99:3.1304E-28:50:5:3:2:59 0/1:42:59:27:32:67:88.06%:99:1.126E-29:41:8:6:2:68 0/1:44:41:25:16:55:74.55%:99:1.5691E-18:40:14:5:9:55 0/1:49:25:15:10:30:83.33%:99:2.745E-12:55:5:3:2:31 1/1:44:36:20:16:40:90%:99:1.2627E-18:43:4:2:2:42 0/1:45:30:19:11:34:88.24%:99:2.5943E-15:37:4:2:2:35 1/1:42:72:31:41:79:91.14%:99:2.3204E-37:44:7:4:3:79 0/1:47:53:25:28:68:77.94%:99:2.045E-24:43:15:6:9:68 0/1:47:69:33:36:79:87.34%:99:2.196E-34:43:10:6:4:79 0/1:47:46:18:28:52:88.46%:99:2.5568E-23:39:6:4:2:52 0/1:46:55:27:28:66:83.33%:99:1.7705E-26:40:11:3:8:68 0/1:43:50:23:27:58:86.21%:99:9.3525E-25:43:8:2:6:60 0/1:44:59:28:31:69:85.51%:99:6.0984E-29:44:10:4:6:70 0/1:44:35:13:22:40:87.5%:99:1.1364E-17:50:5:0:5:41 0/1:45:41:16:25:46:89.13%:99:5.7183E-21:42:5:2:3:46 0/1:42:53:20:33:65:81.54%:99:3.8656E-25:43:12:5:7:66 0/1:45:63:27:36:75:84%:99:1.9107E-30:45:12:8:4:76 0/1:46:40:22:18:51:78.43%:99:1.2719E-18:45:11:8:3:51 0/1:43:64:33:31:73:87.67%:99:1.9583E-32:41:8:4:4:75 0/1:44:67:32:35:85:78.82%:99:6.004E-31:40:18:7:11:85 0/1:47:44:23:21:54:81.48%:99:3.2342E-21:47:9:8:1:55 1/1:43:24:10:14:26:92.31%:99:7.6222E-13:60:2:2:0:26 0/1:43:76:35:41:92:82.61%:99:3.5339E-36:40:16:10:6:93 0/1:45:27:16:11:31:87.1%:99:1.125E-13:43:4:2:2:31 0/1:47:29:17:12:34:85.29%:99:2.0235E-14:43:5:3:2:34 0/1:43:37:18:19:43:86.05%:99:2.1068E-18:45:6:1:5:43 0/1:43:60:28:32:72:83.33%:99:7.6336E-29:37:12:5:7:73 0/1:44:53:21:32:66:80.3%:99:6.9935E-25:40:13:7:6:66 0/1:42:27:12:15:33:81.82%:99:4.5192E-13:43:6:3:3:34 0/1:45:69:30:39:79:87.34%:99:2.196E-34:48:10:3:7:79 1/1:47:54:31:23:59:91.53%:99:3.1304E-28:41:5:1:4:59 0/1:43:40:20:20:48:83.33%:99:2.2074E-19:34:8:3:5:49 0/1:45:42:18:24:51:82.35%:99:3.6994E-20:42:9:4:5:52 1/1:46:63:24:39:69:91.3%:99:8.5235E-33:35:6:3:3:69 1/1:44:31:16:15:34:91.18%:99:2.7308E-16:52:3:2:1:34 0/1:45:37:18:19:47:78.72%:99:2.6563E-17:43:10:3:7:49 0/1:46:48:25:23:57:84.21%:99:2.3901E-23:44:9:4:5:58 0/1:47:35:19:16:44:79.55%:99:1.6883E-16:49:9:4:5:45 0/1:48:51:19:32:64:79.69%:99:7.6717E-24:49:13:7:6:65 1/1:46:36:17:19:40:90%:99:1.2627E-18:47:4:1:3:41 0/1:47:20:9:11:28:71.43%:84:3.9563E-9:39:8:4:4:28 0/1:48:33:15:18:41:80.49%:99:5.85E-16:42:7:2:5:41 0/1:45:32:15:17:38:84.21%:99:1.0241E-15:47:6:2:4:39 0/1:48:19:10:9:22:86.36%:89:1.0931E-9:60:3:2:1:22 0/1:48:40:17:23:48:83.33%:99:2.2074E-19:54:8:2:6:48 0/1:43:76:47:29:86:88.37%:99:3.1017E-38:36:10:2:8:86 0/1:42:42:15:27:56:75%:99:4.9477E-19:43:14:7:7:56 0/1:41:59:22:37:72:81.94%:99:4.9912E-28:43:13:5:8:72 0/1:48:34:18:16:39:87.18%:99:3.9902E-17:49:5:2:3:39 0/1:43:56:27:29:64:87.5%:99:4.9973E-28:45:8:4:4:65 0/1:43:47:25:22:56:83.93%:99:8.1842E-23:41:9:4:5:57 0/1:44:43:22:21:55:78.18%:99:6.0866E-20:46:12:6:6:60 0/1:44:80:38:42:92:86.96%:99:1.2001E-39:38:12:8:4:93 0/1:43:46:26:20:61:75.41%:99:7.4112E-21:43:15:6:9:62 1/1:45:43:22:21:45:95.56%:99:1.0412E-23:47:2:0:2:47 0/1:44:41:18:23:46:89.13%:99:5.7183E-21:41:5:2:3:46 0/1:42:44:24:20:56:78.57%:99:1.8644E-20:38:12:5:7:56 0/1:43:46:24:22:53:86.79%:99:6.1571E-23:40:7:5:2:53 0/1:45:22:9:13:26:84.62%:99:5.5261E-11:47:4:1:3:26 0/1:46:40:24:16:45:88.89%:99:2.0407E-20:46:5:2:3:45 0/1:50:29:14:15:33:87.88%:99:9.1482E-15:60:4:2:2:33 0/1:48:33:14:19:41:80.49%:99:1.0617E-15:45:8:4:4:41 1/1:51:33:24:9:35:94.29%:99:5.9366E-18:60:2:1:1:35 0/1:40:56:27:29:70:80%:99:3.3828E-26:37:14:5:9:71 0/1:47:38:17:21:43:88.37%:99:2.5797E-19:41:5:1:4:44 0/1:42:47:20:27:59:79.66%:99:5.2564E-22:38:12:6:6:59 0/1:43:33:17:16:38:86.84%:99:1.3966E-16:41:5:2:3:38 0/1:39:40:22:18:48:83.33%:99:2.2074E-19:38:8:3:5:49 1/1:44:43:27:16:47:91.49%:99:1.5372E-22:43:4:1:3:47 0/1:40:54:19:35:65:83.08%:99:6.0243E-26:39:11:5:6:65 0/1:41:42:23:19:58:72.41%:99:1.0952E-18:39:16:5:11:58 0/1:42:48:24:24:56:85.71%:99:1.1332E-23:37:8:1:7:58 0/1:43:66:29:37:78:84.62%:99:4.7014E-32:41:12:2:10:78 0/1:41:36:17:19:43:83.72%:99:1.5048E-17:36:7:3:4:43 0/1:37:52:21:31:66:78.79%:99:3.9963E-24:38:14:8:6:68 0/1:45:34:16:18:39:87.18%:99:3.9902E-17:38:5:2:3:40 0/1:48:46:28:18:57:80.7%:99:9.8993E-22:40:11:3:8:57 0/1:45:51:23:28:59:86.44%:99:2.6779E-25:42:8:6:2:61 0/1:43:58:39:19:67:86.57%:99:9.5086E-29:44:9:5:4:67 0/1:44:54:24:30:62:87.1%:99:6.2075E-27:36:8:2:6:64 0/1:43:67:39:28:78:85.9%:99:6.2685E-33:37:11:3:8:78 0/1:41:56:28:28:73:76.71%:99:1.5891E-25:40:17:8:9:74 0/1:43:50:24:26:62:80.65%:99:1.4429E-23:42:12:3:9:65 0/1:40:51:27:24:59:86.44%:99:2.6779E-25:38:8:7:1:61 0/1:43:65:34:31:81:80.25%:99:2.1674E-30:40:16:7:9:81 0/1:39:51:20:31:58:87.93%:99:1.1336E-25:35:7:4:3:61 0/1:41:59:24:35:74:79.73%:99:9.198E-28:36:14:3:11:76 0/1:38:55:25:30:62:88.71%:99:7.0943E-28:35:7:4:3:64 1/1:43:55:21:34:61:90.16%:99:2.6036E-28:36:6:2:4:65 0/1:39:40:18:22:48:83.33%:99:2.2074E-19:35:8:2:6:49 1/1:42:76:42:34:82:92.68%:99:3.7254E-40:37:6:5:1:83 0/1:41:61:33:28:68:89.71%:99:3.3363E-31:36:7:2:5:68 0/1:43:45:20:25:57:78.95%:99:5.6921E-21:36:12:7:5:58 0/1:41:49:22:27:64:76.56%:99:2.2511E-22:37:15:10:5:65 1/1:39:72:35:37:79:91.14%:99:2.3204E-37:40:7:2:5:83 0/1:38:35:18:17:42:83.33%:99:5.1164E-17:36:7:4:3:44 0/1:39:56:26:30:68:82.35%:99:1.0127E-26:35:12:4:8:71 0/1:40:47:22:25:59:79.66%:99:5.2564E-22:37:12:7:5:59 0/1:41:46:30:16:58:79.31%:99:1.7324E-21:38:12:8:4:59 0/1:42:44:23:21:52:84.62%:99:1.6162E-21:36:8:3:5:54 0/1:40:46:23:23:58:79.31%:99:1.7324E-21:40:12:4:8:60 0/1:39:48:19:29:64:75%:99:1.1256E-21:38:16:10:6:64 0/1:39:48:20:28:59:81.36%:99:8.884E-23:36:11:7:4:60 0/1:41:44:24:20:51:86.27%:99:7.5242E-22:37:7:5:2:52 0/1:38:54:27:27:64:84.38%:99:2.9995E-26:35:10:8:2:64 0/1:40:33:18:15:41:80.49%:99:1.0617E-15:35:8:2:6:44 0/1:43:37:24:13:52:71.15%:99:2.1842E-16:38:15:6:9:53 0/1:39:47:37:10:63:74.6%:99:3.5736E-21:36:16:7:9:63 0/1:44:47:27:20:57:82.46%:99:8.1842E-23:39:9:4:5:57 0/1:47:39:21:18:48:81.25%:99:7.4895E-19:41:8:4:4:49 0/1:43:48:26:22:60:80%:99:1.5902E-22:38:12:3:9:60 0/1:40:32:18:14:41:78.05%:99:5.8981E-15:39:9:2:7:41 1/1:40:32:18:14:34:94.12%:99:2.2142E-17:38:2:0:2:34 0/1:41:23:17:6:29:79.31%:99:5.3984E-11:38:6:2:4:30 1/1:44:39:20:19:43:90.7%:99:2.6872E-20:41:4:0:4:43 0/1:41:46:19:27:54:85.19%:99:1.3602E-22:41:8:2:6:55 0/1:41:22:11:11:31:70.97%:92:5.875E-10:41:9:4:5:31 0/1:41:37:18:19:42:88.1%:99:9.1365E-19:46:5:1:4:42 0/1:44:38:20:18:46:82.61%:99:2.5328E-18:40:8:4:4:46 0/1:44:46:23:23:57:80.7%:99:9.8993E-22:43:11:4:7:57 0/1:43:42:26:16:51:82.35%:99:3.6994E-20:36:9:6:3:52 MTB_anc 336047 . C G . PASS AC=62;AF=0.207;AN=300;ANN=G|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.264G>C|p.Ala88Ala|264/2874|264/2874|88/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336047C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336047C>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:12:3:9:75:16%:38:1.5045E-4:45:62:31:31:77 0/0:60:1:0:1:15:6.67%:21:5E-1:50:14:5:9:15 0/0:49:5:3:2:48:10.42%:46:2.8014E-2:45:43:21:22:50 0/0:34:2:1:1:30:6.67%:37:2.4576E-1:47:28:13:15:32 0/0:52:3:2:1:34:8.82%:37:1.194E-1:46:31:17:14:35 0/0:43:4:1:3:29:13.79%:26:5.5981E-2:41:25:13:12:29 0/0:46:6:3:3:44:13.64%:36:1.3026E-2:49:38:21:17:44 0/0:41:5:3:2:39:12.82%:35:2.7273E-2:44:34:14:20:40 0/1:46:8:2:6:44:18.18%:25:2.7573E-3:46:36:17:19:46 0/0:47:4:1:3:37:10.81%:38:5.7399E-2:52:33:14:19:37 0/0:45:3:1:2:52:5.77%:66:1.2136E-1:46:49:28:21:53 0/1:38:7:4:3:66:10.61%:21:6.6083E-3:41:59:27:32:67 0/0:60:3:2:1:22:13.64%:19:1.1628E-1:52:19:11:8:23 0/1:40:7:3:4:63:11.11%:21:6.5529E-3:41:56:29:27:63 0/0:45:5:0:5:50:10%:49:2.8142E-2:46:45:18:27:51 0/0:48:6:2:4:53:11.32%:50:1.3458E-2:46:47:18:29:55 0/0:45:3:2:1:30:10%:31:1.1864E-1:42:27:13:14:31 0/1:34:8:4:4:26:30.77%:26:2.076E-3:40:18:8:10:26 0/0:41:4:3:1:30:13.33%:26:5.62E-2:43:26:17:9:32 0/0:46:4:2:2:38:10.53%:37:5.7534E-2:45:34:15:19:41 0/1:35:7:2:5:40:17.5%:22:5.8688E-3:41:33:18:15:41 0/1:41:9:4:5:73:12.33%:28:1.503E-3:45:64:30:34:75 0/0:52:3:1:2:28:10.71%:28:1.1818E-1:47:25:11:14:29 0/0:54:4:1:3:35:11.43%:35:5.7106E-2:47:31:13:18:35 0/1:45:8:4:4:64:12.5%:25:3.0959E-3:43:56:29:27:64 0/1:47:12:6:6:61:19.67%:38:1.3421E-4:45:49:27:22:61 0/0:49:2:1:1:32:6.25%:40:2.4603E-1:47:30:14:16:32 0/0:40:4:1:3:32:12.5%:29:5.6596E-2:43:28:12:16:32 0/1:44:10:4:6:53:18.87%:32:6.1215E-4:41:43:21:22:55 0/0:54:4:3:1:56:7.14%:65:5.9137E-2:40:52:24:28:59 0/0:42:6:4:2:62:9.68%:62:1.3767E-2:43:56:27:29:63 0/1:39:14:4:10:58:24.14%:46:2.5055E-5:42:44:29:15:60 0/0:52:3:3:0:32:9.38%:34:1.1905E-1:46:29:19:10:33 0/0:43:4:2:2:35:11.43%:35:5.7106E-2:45:31:17:14:36 0/0:36:4:2:2:34:11.76%:31:5.6946E-2:48:30:20:10:34 0/0:40:5:3:2:68:7.35%:77:2.8961E-2:41:63:28:35:70 0/1:45:9:3:6:59:15.25%:28:1.4054E-3:44:50:26:24:59 0/0:40:5:2:3:71:7.04%:84:2.9058E-2:46:66:31:35:72 0/0:43:3:2:1:51:5.88%:66:1.2129E-1:46:48:19:29:51 0/1:38:7:2:5:58:12.07%:21:6.4484E-3:48:51:24:27:59 0/0:42:5:1:4:50:10%:49:2.8142E-2:42:45:23:22:50 0/1:41:8:3:5:62:12.9%:25:3.0712E-3:43:54:26:28:63 0/0:44:3:0:3:42:7.14%:49:1.2048E-1:42:39:14:25:42 0/0:41:5:2:3:47:10.64%:47:2.7945E-2:45:42:18:24:48 0/1:41:10:4:6:68:14.71%:31:6.8401E-4:41:58:24:34:69 0/1:44:9:5:4:70:12.86%:28:1.4851E-3:43:61:29:32:74 0/1:40:7:6:1:46:15.22%:22:6.1097E-3:45:39:22:17:47 0/0:40:5:3:2:70:7.14%:80:2.9026E-2:42:65:34:31:72 0/1:41:12:6:6:69:17.39%:38:1.4479E-4:43:57:32:25:72 0/0:47:6:6:0:53:11.32%:50:1.3458E-2:47:47:25:22:54 0/0:60:2:2:0:25:8%:31:2.449E-1:46:23:8:15:27 0/1:34:10:8:2:90:11.11%:31:7.4993E-4:42:80:36:44:90 0/0:43:3:2:1:30:10%:31:1.1864E-1:45:27:17:10:31 0/0:52:3:2:1:33:9.09%:37:1.1923E-1:43:30:16:14:33 0/0:48:4:1:3:37:10.81%:38:5.7399E-2:44:33:21:12:38 0/1:37:9:4:5:66:13.64%:28:1.4589E-3:44:57:30:27:68 0/1:38:11:6:5:59:18.64%:35:2.925E-4:43:48:22:26:60 0/1:42:7:3:4:37:18.92%:22:5.721E-3:43:30:14:16:39 0/1:43:8:2:6:76:10.53%:24:3.2179E-3:46:68:33:35:78 0/0:45:3:1:2:56:5.36%:72:1.2162E-1:47:53:29:24:56 0/0:33:5:2:3:41:12.2%:38:2.7465E-2:41:36:16:20:43 0/1:38:8:4:4:50:16%:25:2.8851E-3:44:42:18:24:51 0/0:34:5:2:3:64:7.81%:71:2.8819E-2:43:59:26:33:65 0/0:60:2:2:0:35:5.71%:47:2.4638E-1:44:33:17:16:35 0/0:44:6:1:5:37:16.22%:28:1.2549E-2:43:31:16:15:39 0/1:47:7:2:5:53:13.21%:21:6.3251E-3:41:46:22:24:56 0/0:60:6:4:2:46:13.04%:39:1.3136E-2:49:40:21:19:46 0/1:52:10:4:6:57:17.54%:31:6.345E-4:46:47:18:29:61 0/0:52:3:1:2:34:8.82%:37:1.194E-1:44:31:16:15:35 0/1:34:7:4:3:26:26.92%:23:4.9169E-3:47:19:10:9:26 0/0:44:6:2:4:44:13.64%:36:1.3026E-2:47:38:20:18:46 0/0:52:3:1:2:36:8.33%:40:1.1972E-1:49:33:13:20:36 0/0:60:3:2:1:19:15.79%:17:1.1486E-1:45:16:9:7:20 0/1:51:7:2:5:53:13.21%:21:6.3251E-3:47:46:24:22:53 0/0:35:7:2:5:81:8.75%:83:6.8133E-3:42:73:43:30:82 0/1:46:11:6:5:53:20.75%:35:2.7419E-4:42:42:17:25:53 0/1:43:11:5:6:69:15.94%:34:3.1704E-4:41:58:28:30:72 0/0:46:4:1:3:40:10%:40:5.7784E-2:49:36:19:17:40 0/0:40:6:3:3:62:9.68%:62:1.3767E-2:43:56:28:28:64 0/1:40:7:3:4:52:13.46%:22:6.2977E-3:42:45:25:20:53 0/1:43:11:6:5:52:21.15%:35:2.7081E-4:44:41:22:19:53 0/0:38:8:5:3:90:8.89%:92:3.3208E-3:44:82:36:46:92 0/1:44:11:5:6:62:17.74%:35:3.0055E-4:43:51:29:22:63 0/0:47:2:0:2:50:4%:70:2.4747E-1:46:48:26:22:50 0/0:41:4:2:2:49:8.16%:56:5.8654E-2:41:45:18:27:51 0/1:37:10:4:6:56:17.86%:32:6.2917E-4:43:46:24:22:58 0/0:49:3:2:1:54:5.56%:69:1.215E-1:44:51:24:27:56 0/0:52:3:1:2:21:14.29%:19:1.1585E-1:43:18:8:10:23 0/0:49:4:1:3:48:8.33%:52:5.8574E-2:45:44:27:17:48 0/0:60:3:2:1:31:9.68%:34:1.1885E-1:49:28:15:13:31 0/0:51:5:2:3:42:11.9%:38:2.7555E-2:47:37:16:21:43 0/0:60:1:0:1:32:3.12%:48:5E-1:52:31:22:9:33 0/1:36:11:4:7:65:16.92%:35:3.0799E-4:39:54:27:27:67 0/0:41:5:1:4:45:11.11%:44:2.7799E-2:45:40:18:22:45 0/1:37:11:6:5:58:18.97%:35:2.8966E-4:44:47:20:27:60 0/0:40:4:2:2:36:11.11%:34:5.7257E-2:43:32:17:15:37 0/0:39:5:2:3:48:10.42%:46:2.8014E-2:41:43:21:22:49 0/0:45:3:1:2:51:5.88%:66:1.2129E-1:45:48:28:20:51 0/1:37:7:3:4:63:11.11%:21:6.5529E-3:42:56:20:36:65 0/1:39:12:5:7:58:20.69%:38:1.2966E-4:40:46:24:22:58 0/0:37:4:1:3:54:7.41%:62:5.9012E-2:42:50:20:30:55 0/1:42:9:2:7:75:12%:28:1.5142E-3:41:66:31:35:75 0/0:33:4:2:2:42:9.52%:43:5.801E-2:40:38:18:20:42 0/1:37:10:6:4:61:16.39%:31:6.543E-4:39:51:23:28:69 0/0:35:5:3:2:39:12.82%:35:2.7273E-2:42:34:18:16:42 0/0:40:6:1:5:54:11.11%:50:1.3497E-2:45:48:28:20:56 0/0:38:6:5:1:61:9.84%:62:1.3737E-2:45:55:24:31:61 0/0:44:6:5:1:63:9.52%:65:1.3796E-2:42:57:38:19:64 0/1:36:8:3:5:64:12.5%:25:3.0959E-3:43:56:27:29:64 0/1:36:9:2:7:78:11.54%:28:1.5299E-3:43:69:39:30:79 0/1:41:11:4:7:64:17.19%:35:3.0557E-4:40:53:28:25:66 0/1:43:9:2:7:56:16.07%:28:1.3788E-3:42:47:22:25:58 0/0:42:4:3:1:55:7.27%:62:5.9012E-2:39:50:30:20:59 0/1:38:12:6:6:70:17.14%:38:1.4598E-4:44:58:29:29:72 0/0:36:4:3:1:45:8.89%:50:5.8311E-2:40:41:20:21:49 0/1:35:10:2:8:70:14.29%:31:6.9153E-4:39:60:27:33:72 0/0:34:6:5:1:66:9.09%:68:1.3877E-2:37:60:28:32:67 0/0:33:3:2:1:58:5.17%:75:1.2174E-1:43:55:26:29:64 0/0:33:5:2:3:44:11.36%:41:2.7721E-2:38:39:17:22:45 0/0:36:5:4:1:78:6.41%:93:2.9254E-2:43:73:44:29:80 0/0:36:5:2:3:71:7.04%:84:2.9058E-2:40:66:36:30:72 0/1:34:10:6:4:59:16.95%:31:6.4469E-4:41:49:22:27:61 0/1:38:9:4:5:58:15.52%:28:1.3968E-3:40:49:23:26:60 0/0:42:5:2:3:78:6.41%:93:2.9254E-2:39:73:37:36:79 0/0:36:6:2:4:43:13.95%:36:1.2967E-2:35:37:22:15:44 0/0:35:6:3:3:59:10.17%:59:1.3674E-2:37:53:28:25:66 0/1:35:11:7:4:60:18.33%:35:2.9526E-4:37:49:28:21:63 0/1:37:7:4:3:50:14%:22:6.2398E-3:40:43:30:13:51 0/0:36:6:3:3:51:11.76%:47:1.3375E-2:39:45:22:23:53 0/1:40:9:3:6:51:17.65%:28:1.3283E-3:40:42:20:22:54 0/1:38:10:6:4:63:15.87%:31:6.6338E-4:41:53:23:30:70 0/1:35:9:5:4:55:16.36%:28:1.3694E-3:38:46:21:25:56 0/0:36:5:3:2:44:11.36%:41:2.7721E-2:42:39:21:18:48 0/1:34:8:7:1:62:12.9%:25:3.0712E-3:38:54:27:27:64 0/0:45:3:1:2:42:7.14%:49:1.2048E-1:38:39:20:19:44 0/1:36:16:7:9:61:26.23%:53:4.9254E-6:39:45:31:14:62 0/1:36:11:4:7:59:18.64%:35:2.925E-4:39:48:37:11:60 0/1:38:8:4:4:61:13.11%:25:3.0583E-3:42:53:31:22:61 0/0:38:6:3:3:49:12.24%:44:1.3285E-2:46:43:24:19:51 0/1:36:8:3:5:58:13.79%:25:3.0172E-3:43:50:27:23:59 0/1:43:7:1:6:38:18.42%:22:5.7727E-3:40:31:20:11:41 0/0:34:1:0:1:34:2.94%:51:5E-1:39:33:19:14:34 0/0:37:5:2:3:32:15.62%:24:2.6412E-2:38:27:18:9:33 0/0:42:4:0:4:41:9.76%:40:5.7784E-2:43:36:18:18:43 0/0:43:6:2:4:51:11.76%:47:1.3375E-2:38:45:19:26:53 0/1:42:8:4:4:32:25%:26:2.3764E-3:37:24:12:12:32 0/0:49:4:1:3:36:11.11%:34:5.7257E-2:41:32:15:17:37 0/1:39:8:4:4:43:18.6%:25:2.7329E-3:45:35:18:17:44 0/1:46:7:3:4:52:13.46%:22:6.2977E-3:42:45:23:22:55 0/0:36:6:4:2:50:12%:44:1.3331E-2:39:44:27:17:51 MTB_anc 336050 . A G . PASS AC=59;AF=0.197;AN=300;ANN=G|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.261T>C|p.Tyr87Tyr|261/2874|261/2874|87/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336050A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336050A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:13:4:9:73:17.81%:41:6.7998E-5:45:60:29:31:76 0/0:60:1:0:1:17:5.88%:24:5E-1:49:16:5:11:17 0/0:47:6:4:2:51:11.76%:47:1.3375E-2:45:45:23:22:51 0/0:33:2:1:1:31:6.45%:40:2.459E-1:47:29:13:16:31 0/0:52:3:2:1:35:8.57%:40:1.1957E-1:45:32:17:15:35 0/0:42:3:1:2:27:11.11%:28:1.1792E-1:43:24:12:12:28 0/0:50:5:2:3:44:11.36%:41:2.7721E-2:49:39:23:16:45 0/0:40:5:3:2:39:12.82%:35:2.7273E-2:45:34:14:20:39 0/1:47:8:2:6:47:17.02%:25:2.8249E-3:45:39:17:22:47 0/0:48:4:1:3:36:11.11%:34:5.7257E-2:53:32:13:19:36 0/0:44:3:1:2:50:6%:62:1.2121E-1:48:47:27:20:52 0/1:40:7:4:3:64:10.94%:21:6.5719E-3:41:57:27:30:67 0/0:48:3:2:1:25:12%:25:1.1735E-1:48:22:12:10:25 0/1:40:7:3:4:63:11.11%:21:6.5529E-3:42:56:29:27:63 0/0:44:5:0:5:51:9.8%:53:2.8203E-2:46:46:19:27:51 0/0:48:6:2:4:55:10.91%:53:1.3535E-2:44:49:20:29:56 0/0:43:3:2:1:30:10%:31:1.1864E-1:43:27:13:14:30 0/0:34:6:2:4:24:25%:11:1.0968E-2:40:18:8:10:25 0/0:38:5:4:1:30:16.67%:21:2.6093E-2:43:25:16:9:31 0/0:48:4:1:3:39:10.26%:41:5.7662E-2:45:35:15:20:40 0/1:37:7:2:5:41:17.07%:22:5.9136E-3:41:34:18:16:41 0/1:40:10:4:6:75:13.33%:31:7.0876E-4:45:65:31:34:76 0/0:52:3:1:2:30:10%:31:1.1864E-1:46:27:13:14:31 0/0:54:4:1:3:34:11.76%:31:5.6946E-2:48:30:12:18:35 0/1:43:7:4:3:62:11.29%:21:6.5333E-3:43:55:28:27:64 0/1:47:12:6:6:61:19.67%:38:1.3421E-4:46:49:27:22:61 0/0:49:2:1:1:31:6.45%:40:2.459E-1:46:29:14:15:31 0/0:41:4:1:3:32:12.5%:29:5.6596E-2:43:28:12:16:32 0/1:44:10:4:6:54:18.52%:32:6.18E-4:41:44:21:23:56 0/0:54:4:3:1:56:7.14%:65:5.9137E-2:40:52:23:29:58 0/0:44:6:4:2:62:9.68%:62:1.3767E-2:44:56:27:29:64 0/1:40:14:4:10:57:24.56%:46:2.4613E-5:43:43:29:14:57 0/0:60:2:2:0:31:6.45%:40:2.459E-1:46:29:17:12:32 0/0:41:4:2:2:36:11.11%:34:5.7257E-2:44:32:17:15:37 0/0:35:4:2:2:32:12.5%:29:5.6596E-2:49:28:18:10:33 0/0:43:4:2:2:71:5.63%:91:5.985E-2:41:67:28:39:72 0/1:46:8:2:6:57:14.04%:25:3.0025E-3:44:49:26:23:58 0/0:38:6:3:3:73:8.22%:80:1.4042E-2:47:67:32:35:73 0/0:42:3:2:1:50:6%:62:1.2121E-1:46:47:19:28:51 0/0:40:6:2:4:57:10.53%:56:1.3607E-2:48:51:24:27:58 0/0:41:5:1:4:47:10.64%:47:2.7945E-2:42:42:23:19:49 0/1:41:8:3:5:62:12.9%:25:3.0712E-3:43:54:25:29:63 0/0:45:3:0:3:42:7.14%:49:1.2048E-1:42:39:14:25:42 0/0:42:5:2:3:47:10.64%:47:2.7945E-2:45:42:17:25:48 0/1:42:9:3:6:66:13.64%:28:1.4589E-3:40:57:23:34:70 0/1:44:8:5:3:67:11.94%:25:3.1302E-3:43:59:28:31:72 0/1:41:7:6:1:46:15.22%:22:6.1097E-3:45:39:23:16:47 0/0:40:5:3:2:69:7.25%:81:2.8994E-2:43:64:32:32:72 0/1:41:11:5:6:69:15.94%:34:3.1704E-4:43:58:31:27:70 0/0:47:6:6:0:54:11.11%:50:1.3497E-2:46:48:26:22:55 0/0:60:2:2:0:27:7.41%:34:2.4528E-1:44:25:9:16:28 0/1:37:9:7:2:88:10.23%:28:1.5753E-3:42:79:34:45:90 0/0:43:3:2:1:31:9.68%:34:1.1885E-1:45:28:17:11:31 0/0:52:3:2:1:33:9.09%:37:1.1923E-1:42:30:16:14:33 0/0:48:4:1:3:39:10.26%:41:5.7662E-2:44:35:22:13:39 0/1:36:9:4:5:66:13.64%:28:1.4589E-3:44:57:30:27:66 0/1:38:11:6:5:62:17.74%:35:2.9794E-4:44:50:23:27:62 0/0:44:6:2:4:38:15.79%:28:1.2628E-2:41:32:16:16:40 0/1:45:8:2:6:74:10.81%:24:3.2002E-3:45:66:30:36:78 0/0:44:3:1:2:58:5.17%:75:1.2174E-1:46:55:31:24:59 0/0:36:4:2:2:41:9.76%:44:5.79E-2:42:37:17:20:41 0/1:40:7:3:4:48:14.58%:22:6.1774E-3:44:41:17:24:51 0/0:35:5:2:3:61:8.2%:68:2.87E-2:44:56:23:33:62 0/0:60:2:2:0:35:5.71%:47:2.4638E-1:45:33:17:16:35 0/0:44:6:1:5:38:15.79%:28:1.2628E-2:43:32:17:15:39 0/1:45:8:3:5:57:14.04%:25:3.0025E-3:41:49:23:26:57 0/0:60:6:4:2:46:13.04%:39:1.3136E-2:49:40:20:20:47 0/1:48:13:7:6:61:21.31%:42:5.9784E-5:45:48:19:29:61 0/0:52:3:1:2:37:8.11%:43:1.1986E-1:43:34:19:15:37 0/0:36:6:3:3:24:25%:11:1.0968E-2:48:18:10:8:26 0/0:43:6:2:4:46:13.04%:39:1.3136E-2:47:40:20:20:46 0/0:50:3:1:2:36:8.33%:40:1.1972E-1:49:33:14:19:37 0/0:60:2:1:1:17:11.76%:18:2.4242E-1:45:15:9:6:17 0/0:55:6:2:4:52:11.54%:47:1.3417E-2:47:46:24:22:52 0/0:35:6:2:4:78:7.79%:87:1.4124E-2:42:71:42:29:82 0/1:46:11:6:5:50:22%:35:2.6374E-4:43:39:16:23:53 0/1:42:11:5:6:72:15.28%:34:3.2327E-4:41:61:28:33:72 0/0:49:2:0:2:39:5.13%:54:2.4675E-1:49:37:20:17:40 0/0:43:6:3:3:62:9.68%:62:1.3767E-2:43:56:26:30:63 0/1:39:8:4:4:52:15.38%:25:2.9216E-3:41:44:24:20:53 0/1:43:11:6:5:50:22%:35:2.6374E-4:45:39:19:20:53 0/0:36:8:6:2:88:9.09%:89:3.308E-3:44:80:35:45:91 0/1:46:10:5:5:61:16.39%:31:6.543E-4:42:51:28:23:61 0/0:49:2:0:2:49:4.08%:71:2.4742E-1:45:47:25:22:49 0/0:44:3:1:2:50:6%:62:1.2121E-1:42:47:19:28:52 0/1:36:11:5:6:60:18.33%:35:2.9526E-4:42:49:25:24:60 0/0:48:4:3:1:54:7.41%:62:5.9012E-2:44:50:23:27:56 0/0:51:3:1:2:23:13.04%:22:1.1667E-1:44:20:8:12:23 0/0:49:4:1:3:46:8.7%:49:5.8402E-2:46:42:25:17:48 0/0:60:3:2:1:31:9.68%:34:1.1885E-1:49:28:15:13:31 0/0:46:6:3:3:43:13.95%:36:1.2967E-2:46:37:16:21:43 0/0:60:1:0:1:34:2.94%:51:5E-1:51:33:22:11:34 0/1:37:12:5:7:67:17.91%:38:1.4234E-4:40:55:28:27:67 0/0:39:5:1:4:45:11.11%:44:2.7799E-2:45:40:18:22:45 0/1:39:10:5:5:56:17.86%:32:6.2917E-4:44:46:19:27:57 0/0:42:4:2:2:36:11.11%:34:5.7257E-2:43:32:17:15:36 0/0:39:5:2:3:48:10.42%:46:2.8014E-2:41:43:21:22:50 0/0:45:3:1:2:50:6%:62:1.2121E-1:44:47:28:19:51 0/1:34:8:4:4:64:12.5%:25:3.0959E-3:42:56:20:36:66 0/1:40:12:5:7:57:21.05%:38:1.2806E-4:39:45:24:21:59 0/0:37:4:1:3:55:7.27%:65:5.9076E-2:42:51:19:32:56 0/1:42:8:2:6:73:10.96%:24:3.1909E-3:41:65:31:34:74 0/0:35:4:2:2:43:9.3%:47:5.8115E-2:40:39:19:20:44 0/1:37:11:7:4:66:16.67%:35:3.1034E-4:40:55:24:31:69 0/0:37:5:3:2:40:12.5%:35:2.7371E-2:43:35:17:18:41 0/1:38:7:2:5:54:12.96%:21:6.3515E-3:45:47:28:19:55 0/0:38:5:4:1:58:8.62%:62:2.8569E-2:45:53:24:29:59 0/0:43:6:5:1:64:9.38%:65:1.3824E-2:41:58:39:19:64 0/1:36:8:3:5:62:12.9%:25:3.0712E-3:43:54:24:30:65 0/1:37:8:2:6:77:10.39%:24:3.2264E-3:43:69:38:31:78 0/1:40:12:5:7:63:19.05%:38:1.3705E-4:41:51:25:26:65 0/1:45:8:2:6:55:14.55%:25:2.9718E-3:42:47:23:24:55 0/0:39:6:5:1:57:10.53%:56:1.3607E-2:40:51:30:21:58 0/1:38:12:6:6:69:17.39%:38:1.4479E-4:43:57:27:30:71 0/0:36:4:3:1:45:8.89%:50:5.8311E-2:40:41:17:24:48 0/1:36:10:2:8:69:14.49%:31:6.8782E-4:39:59:26:33:71 0/0:33:4:3:1:63:6.35%:78:5.9512E-2:37:59:28:31:68 0/0:32:2:2:0:58:3.45%:84:2.4783E-1:43:56:24:32:63 0/0:34:5:2:3:42:11.9%:38:2.7555E-2:40:37:17:20:45 0/0:36:5:4:1:73:6.85%:87:2.9117E-2:43:68:41:27:77 0/0:36:6:2:4:72:8.33%:77:1.4021E-2:40:66:36:30:72 0/1:35:9:5:4:58:15.52%:28:1.3968E-3:41:49:22:27:59 0/1:38:10:5:5:59:16.95%:31:6.4469E-4:41:49:23:26:60 0/0:41:5:2:3:78:6.41%:93:2.9254E-2:39:73:37:36:81 0/0:35:5:2:3:39:12.82%:35:2.7273E-2:36:34:19:15:43 0/1:34:7:4:3:65:10.77%:21:6.5904E-3:36:58:28:30:68 0/1:36:11:7:4:62:17.74%:35:3.0055E-4:38:51:28:23:62 0/0:39:5:2:3:47:10.64%:47:2.7945E-2:39:42:29:13:49 0/1:36:7:3:4:53:13.21%:21:6.3251E-3:40:46:22:24:53 0/1:39:9:3:6:51:17.65%:28:1.3283E-3:39:42:19:23:53 0/1:37:12:8:4:66:18.18%:38:1.4106E-4:40:54:23:31:68 0/1:34:8:4:4:56:14.29%:25:2.9874E-3:40:48:22:26:56 0/0:34:5:3:2:44:11.36%:41:2.7721E-2:42:39:21:18:48 0/1:34:7:6:1:60:11.67%:21:6.4922E-3:37:53:27:26:63 0/0:44:3:1:2:40:7.5%:46:1.2025E-1:38:37:17:20:43 0/1:37:14:5:9:58:24.14%:46:2.5055E-5:40:44:30:14:60 0/1:35:12:5:7:60:20%:38:1.3273E-4:39:48:37:11:60 0/1:39:8:4:4:59:13.56%:25:3.0313E-3:42:51:30:21:60 0/0:39:5:3:2:50:10%:49:2.8142E-2:46:45:24:21:51 0/1:35:8:3:5:57:14.04%:25:3.0025E-3:44:49:26:23:59 0/1:41:8:2:6:38:21.05%:25:2.5935E-3:40:30:19:11:40 0/0:33:1:0:1:35:2.86%:55:5E-1:40:34:20:14:36 0/0:37:5:2:3:34:14.71%:27:2.6693E-2:38:29:19:10:34 0/0:43:4:0:4:43:9.3%:47:5.8115E-2:43:39:18:21:43 0/0:46:5:1:4:50:10%:49:2.8142E-2:38:45:18:27:52 0/1:42:8:4:4:32:25%:26:2.3764E-3:38:24:12:12:32 0/0:49:4:1:3:36:11.11%:34:5.7257E-2:41:32:16:16:37 0/1:39:8:4:4:46:17.39%:25:2.8033E-3:45:38:20:18:46 0/1:44:8:4:4:52:15.38%:25:2.9216E-3:43:44:22:22:54 0/0:36:6:4:2:49:12.24%:44:1.3285E-2:40:43:26:17:51 MTB_anc 336053 . G C . PASS AC=58;AF=0.193;AN=300;ANN=C|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.258C>G|p.Ala86Ala|258/2874|258/2874|86/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336053G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336053G>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:12:3:9:75:16%:38:1.5151E-4:45:63:30:33:77 0/0:60:1:0:1:18:5.56%:24:5E-1:47:17:5:12:18 0/0:47:6:4:2:50:12%:44:1.3331E-2:45:44:22:22:51 0/0:33:2:1:1:31:6.45%:40:2.459E-1:47:29:13:16:31 0/0:52:3:2:1:36:8.33%:40:1.1972E-1:45:33:18:15:36 0/0:42:3:1:2:28:10.71%:28:1.1818E-1:43:25:13:12:28 0/0:47:6:3:3:45:13.33%:39:1.3082E-2:49:39:23:16:45 0/0:41:5:3:2:39:12.82%:35:2.7273E-2:44:34:14:20:40 0/1:48:8:2:6:49:16.33%:25:2.8658E-3:45:41:18:23:49 0/0:48:4:1:3:36:11.11%:34:5.7257E-2:53:32:13:19:36 0/0:45:3:1:2:50:6%:62:1.2121E-1:47:47:26:21:51 0/0:38:6:4:2:61:9.84%:62:1.3737E-2:42:55:24:31:65 0/0:60:3:2:1:26:11.54%:25:1.1765E-1:48:23:12:11:26 0/1:38:7:3:4:63:11.11%:21:6.5529E-3:41:56:29:27:64 0/0:49:4:0:4:48:8.33%:52:5.8574E-2:47:44:17:27:50 0/0:48:6:2:4:54:11.11%:50:1.3497E-2:44:48:19:29:56 0/0:43:3:2:1:30:10%:31:1.1864E-1:42:27:13:14:30 0/1:33:7:3:4:27:25.93%:22:5.0143E-3:40:20:8:12:27 0/0:40:5:4:1:30:16.67%:21:2.6093E-2:44:25:16:9:31 0/0:44:4:1:3:40:10%:40:5.7784E-2:45:36:15:21:41 0/1:37:7:2:5:39:17.95%:22:5.8219E-3:42:32:18:14:40 0/1:39:9:4:5:71:12.68%:28:1.4912E-3:46:62:28:34:75 0/0:51:3:1:2:31:9.68%:34:1.1885E-1:45:28:14:14:32 0/0:54:4:1:3:35:11.43%:35:5.7106E-2:48:31:13:18:36 0/0:44:6:3:3:62:9.68%:62:1.3767E-2:43:56:30:26:64 0/1:47:12:6:6:61:19.67%:38:1.3421E-4:46:49:27:22:61 0/0:47:2:1:1:30:6.67%:37:2.4576E-1:47:28:13:15:32 0/0:41:4:1:3:33:12.12%:32:5.6777E-2:43:29:13:16:33 0/1:45:9:3:6:54:16.67%:28:1.3596E-3:41:45:22:23:56 0/0:53:4:3:1:55:7.27%:65:5.9076E-2:41:51:23:28:55 0/0:43:6:4:2:62:9.68%:62:1.3767E-2:43:56:27:29:64 0/1:39:14:4:10:55:25.45%:46:2.3698E-5:44:41:27:14:56 0/0:60:1:1:0:29:3.45%:41:5E-1:46:27:16:11:31 0/0:40:4:2:2:36:11.11%:34:5.7257E-2:45:32:17:15:37 0/0:35:4:2:2:31:12.9%:29:5.6405E-2:49:27:17:10:32 0/0:40:4:2:2:71:5.63%:91:5.985E-2:42:67:28:39:72 0/1:43:9:3:6:59:15.25%:28:1.4054E-3:43:50:26:24:59 0/0:38:6:3:3:70:8.57%:74:1.3976E-2:47:64:31:33:72 0/0:43:3:2:1:50:6%:62:1.2121E-1:47:47:18:29:51 0/0:40:6:2:4:56:10.71%:53:1.3571E-2:48:50:23:27:58 0/0:40:5:1:4:48:10.42%:46:2.8014E-2:43:43:22:21:49 0/1:40:8:3:5:61:13.11%:25:3.0583E-3:43:53:26:27:63 0/0:49:2:0:2:39:5.13%:54:2.4675E-1:43:37:13:24:42 0/0:41:5:2:3:48:10.42%:46:2.8014E-2:45:43:18:25:48 0/1:41:10:4:6:70:14.29%:31:6.9153E-4:41:60:24:36:70 0/1:40:8:5:3:69:11.59%:25:3.1516E-3:44:61:30:31:71 0/1:42:7:6:1:45:15.56%:22:6.0738E-3:45:38:22:16:47 0/0:38:5:3:2:71:7.04%:84:2.9058E-2:42:66:32:34:73 0/1:40:9:4:5:66:13.64%:28:1.4589E-3:44:57:29:28:69 0/0:46:6:6:0:55:10.91%:53:1.3535E-2:47:49:26:23:56 0/0:60:2:2:0:28:7.14%:34:2.4545E-1:44:26:9:17:28 0/0:36:8:6:2:92:8.7%:95:3.3331E-3:42:84:36:48:92 0/0:42:3:2:1:30:10%:31:1.1864E-1:46:27:16:11:31 0/0:52:3:2:1:33:9.09%:37:1.1923E-1:42:30:16:14:33 0/0:48:4:1:3:37:10.81%:38:5.7399E-2:44:33:21:12:39 0/1:36:8:4:4:65:12.31%:25:3.1077E-3:44:57:28:29:67 0/1:39:11:6:5:61:18.03%:35:2.9794E-4:43:50:22:28:63 0/0:43:6:3:3:38:15.79%:28:1.2628E-2:42:32:16:16:40 0/1:43:9:3:6:76:11.84%:28:1.5196E-3:46:67:32:35:77 0/0:44:3:1:2:59:5.08%:79:1.2179E-1:46:56:31:25:60 0/0:35:4:2:2:39:10.26%:41:5.7662E-2:42:35:17:18:41 0/1:40:8:4:4:49:16.33%:25:2.8658E-3:44:41:17:24:50 0/0:36:5:2:3:62:8.06%:68:2.8741E-2:44:57:23:34:63 0/0:60:2:2:0:34:5.88%:43:2.4627E-1:44:32:16:16:34 0/0:45:6:1:5:38:15.79%:28:1.2628E-2:43:32:16:16:39 0/1:44:8:3:5:55:14.55%:25:2.9718E-3:43:47:23:24:56 0/0:60:6:4:2:46:13.04%:39:1.3136E-2:49:40:20:20:46 0/1:47:12:6:6:60:20%:38:1.3273E-4:45:48:19:29:61 0/0:49:3:1:2:37:8.11%:43:1.1986E-1:42:34:19:15:37 0/1:35:7:4:3:25:28%:23:4.8126E-3:48:18:10:8:26 0/0:43:6:2:4:46:13.04%:39:1.3136E-2:48:40:20:20:47 0/0:52:3:1:2:36:8.33%:40:1.1972E-1:48:33:13:20:36 0/0:60:2:1:1:16:12.5%:15:2.4194E-1:45:14:8:6:17 0/0:56:6:2:4:50:12%:44:1.3331E-2:48:44:23:21:51 0/0:36:7:2:5:78:9.09%:80:6.7755E-3:43:70:41:29:82 0/1:48:10:6:4:51:19.61%:32:5.9987E-4:42:41:17:24:54 0/1:42:11:5:6:64:17.19%:35:3.0557E-4:41:53:23:30:69 0/0:39:3:1:2:40:7.5%:46:1.2025E-1:49:37:20:17:41 0/0:43:6:3:3:62:9.68%:62:1.3767E-2:43:56:26:30:63 0/1:38:8:4:4:52:15.38%:25:2.9216E-3:43:44:24:20:52 0/1:44:10:6:4:51:19.61%:32:5.9987E-4:44:41:20:21:52 0/0:37:8:6:2:88:9.09%:89:3.308E-3:45:80:34:46:89 0/1:45:10:5:5:60:16.67%:31:6.4957E-4:42:50:28:22:60 0/0:49:2:0:2:47:4.26%:67:2.4731E-1:46:45:24:21:47 0/0:45:3:1:2:50:6%:62:1.2121E-1:41:47:18:29:52 0/1:38:11:5:6:60:18.33%:35:2.9526E-4:42:49:25:24:60 0/0:47:4:3:1:54:7.41%:62:5.9012E-2:44:50:23:27:55 0/0:52:3:1:2:22:13.64%:19:1.1628E-1:44:19:8:11:22 0/0:48:4:1:3:46:8.7%:49:5.8402E-2:46:42:25:17:47 0/0:60:3:2:1:31:9.68%:34:1.1885E-1:48:28:15:13:32 0/0:47:6:3:3:43:13.95%:36:1.2967E-2:46:37:16:21:43 0/0:60:1:0:1:33:3.03%:52:5E-1:51:32:21:11:33 0/1:36:12:5:7:66:18.18%:38:1.4106E-4:40:54:27:27:67 0/0:39:5:1:4:46:10.87%:44:2.7874E-2:44:41:18:23:46 0/1:39:9:4:5:55:16.36%:28:1.3694E-3:44:46:20:26:57 0/0:41:4:2:2:36:11.11%:34:5.7257E-2:43:32:17:15:36 0/0:37:5:2:3:49:10.2%:50:2.8079E-2:41:44:23:21:50 0/0:45:3:1:2:50:6%:62:1.2121E-1:44:47:28:19:51 0/1:34:8:4:4:64:12.5%:25:3.0959E-3:42:56:20:36:65 0/1:40:12:5:7:57:21.05%:38:1.2806E-4:39:45:25:20:57 0/0:37:4:1:3:55:7.27%:65:5.9076E-2:42:51:19:32:55 0/1:42:9:2:7:71:12.68%:28:1.4912E-3:42:62:30:32:72 0/0:33:4:2:2:45:8.89%:50:5.8311E-2:40:41:18:23:45 0/1:38:11:7:4:67:16.42%:35:3.1263E-4:40:56:26:30:69 0/0:37:5:3:2:40:12.5%:35:2.7371E-2:43:35:17:18:41 0/1:36:7:2:5:57:12.28%:21:6.4254E-3:44:50:29:21:57 0/0:40:5:4:1:58:8.62%:62:2.8569E-2:46:53:24:29:59 0/0:44:6:5:1:61:9.84%:62:1.3737E-2:42:55:36:19:63 0/1:36:8:3:5:62:12.9%:25:3.0712E-3:43:54:24:30:64 0/1:37:8:2:6:76:10.53%:24:3.2179E-3:44:68:37:31:77 0/1:41:11:4:7:64:17.19%:35:3.0557E-4:41:53:27:26:65 0/1:45:8:2:6:53:15.09%:25:2.9389E-3:44:45:21:24:55 0/0:37:6:5:1:55:10.91%:53:1.3535E-2:40:49:27:22:58 0/1:37:12:6:6:70:17.14%:38:1.4598E-4:43:58:27:31:71 0/0:33:4:3:1:45:8.89%:50:5.8311E-2:39:41:18:23:48 0/1:36:10:2:8:67:14.93%:31:6.8011E-4:39:57:21:36:71 0/0:35:6:5:1:64:9.38%:65:1.3824E-2:38:58:26:32:69 0/0:30:2:2:0:58:3.45%:84:2.4783E-1:44:56:25:31:60 0/0:35:5:2:3:36:13.89%:29:2.6944E-2:41:31:10:21:43 0/0:35:5:4:1:71:7.04%:84:2.9058E-2:44:66:40:26:76 0/0:35:5:2:3:69:7.25%:81:2.8994E-2:40:64:34:30:71 0/1:35:8:5:3:54:14.81%:25:2.9557E-3:41:46:19:27:57 0/1:37:10:5:5:59:16.95%:31:6.4469E-4:41:49:23:26:59 0/0:41:5:2:3:75:6.67%:90:2.9174E-2:39:70:34:36:81 0/0:37:6:2:4:40:15%:30:1.2773E-2:36:34:20:14:43 0/0:35:6:3:3:60:10%:59:1.3706E-2:38:54:25:29:63 0/1:36:11:7:4:60:18.33%:35:2.9526E-4:39:49:27:22:61 0/0:41:5:2:3:48:10.42%:46:2.8014E-2:40:43:29:14:49 0/1:36:7:3:4:50:14%:22:6.2398E-3:41:43:21:22:52 0/1:41:9:3:6:49:18.37%:28:1.3055E-3:39:40:17:23:53 0/1:37:12:8:4:65:18.46%:38:1.3976E-4:40:53:22:31:69 0/1:35:8:4:4:55:14.55%:25:2.9718E-3:39:47:21:26:56 0/0:36:5:3:2:46:10.87%:44:2.7874E-2:41:41:22:19:47 0/1:35:7:6:1:60:11.67%:21:6.4922E-3:39:53:26:27:62 0/0:43:3:1:2:43:6.98%:53:1.2059E-1:38:40:19:21:44 0/1:39:11:2:9:58:18.97%:35:2.8674E-4:40:46:32:14:61 0/1:34:12:5:7:61:19.67%:38:1.3421E-4:39:49:38:11:61 0/1:37:8:4:4:59:13.56%:25:3.0313E-3:43:51:30:21:60 0/0:36:5:3:2:49:10.2%:50:2.8079E-2:47:44:23:21:51 0/1:36:9:3:6:60:15%:28:1.4138E-3:44:51:28:23:60 0/1:42:8:2:6:39:20.51%:25:2.624E-3:41:31:18:13:39 0/0:33:1:0:1:35:2.86%:55:5E-1:40:34:19:15:36 0/0:36:5:2:3:32:15.62%:24:2.6412E-2:38:27:17:10:33 0/0:41:4:0:4:43:9.3%:47:5.8115E-2:43:39:18:21:43 0/1:42:7:2:5:51:13.73%:22:6.2693E-3:38:44:18:26:51 0/1:43:8:4:4:32:25%:26:2.3764E-3:39:24:12:12:32 0/0:49:4:1:3:36:11.11%:34:5.7257E-2:41:32:15:17:37 0/1:39:8:4:4:47:17.02%:25:2.8249E-3:44:39:20:19:47 0/1:45:8:4:4:51:15.69%:25:2.9037E-3:43:43:22:21:53 0/0:36:6:4:2:50:12%:44:1.3331E-2:40:44:26:18:51 MTB_anc 336074 . T C . PASS AC=42;AF=0.140;AN=300;ANN=C|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.237A>G|p.Ala79Ala|237/2874|237/2874|79/957||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336074T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336074T>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:12:4:8:77:15.58%:38:1.5356E-4:44:65:30:35:78 0/0:0:0:0:0:17:0%:33:1E0:51:17:5:12:17 0/0:46:6:4:2:51:11.76%:47:1.3375E-2:44:45:23:22:51 0/0:30:2:1:1:33:6.06%:44:2.4615E-1:46:31:15:16:33 0/0:49:2:1:1:37:5.41%:50:2.4658E-1:44:35:20:15:37 0/0:45:3:1:2:31:9.68%:34:1.1885E-1:43:28:15:13:32 0/0:48:6:3:3:44:13.64%:36:1.3026E-2:48:38:24:14:44 0/0:40:5:3:2:44:11.36%:41:2.7721E-2:43:39:17:22:44 0/1:48:8:2:6:54:14.81%:25:2.9557E-3:44:46:21:25:55 0/0:48:2:1:1:34:5.88%:43:2.4627E-1:53:32:13:19:34 0/0:45:3:1:2:45:6.67%:56:1.2079E-1:47:42:24:18:46 0/0:42:5:3:2:62:8.06%:68:2.8741E-2:41:57:26:31:64 0/0:52:3:2:1:29:10.34%:31:1.1842E-1:49:26:14:12:29 0/1:39:7:3:4:62:11.29%:21:6.5333E-3:42:55:30:25:63 0/0:47:4:0:4:50:8%:55:5.8732E-2:46:46:20:26:51 0/0:48:6:2:4:57:10.53%:56:1.3607E-2:46:51:20:31:57 0/0:48:2:2:0:28:7.14%:34:2.4545E-1:44:26:13:13:28 0/1:37:7:3:4:28:25%:22:5.1054E-3:43:21:10:11:28 0/0:33:3:3:0:31:9.68%:34:1.1885E-1:44:28:18:10:32 0/0:51:3:1:2:39:7.69%:47:1.2013E-1:47:36:14:22:40 0/1:35:7:2:5:43:16.28%:22:5.9972E-3:42:36:21:15:44 0/1:36:8:3:5:73:10.96%:24:3.1909E-3:44:65:32:33:73 0/0:50:3:1:2:30:10%:31:1.1864E-1:47:27:12:15:31 0/0:60:3:1:2:36:8.33%:40:1.1972E-1:47:33:14:19:37 0/0:46:5:3:2:61:8.2%:68:2.87E-2:43:56:28:28:64 0/1:48:8:5:3:55:14.55%:25:2.9718E-3:45:47:25:22:55 0/0:45:2:1:1:34:5.88%:43:2.4627E-1:44:32:16:16:35 0/0:38:1:0:1:30:3.33%:44:5E-1:44:29:12:17:31 0/1:42:8:4:4:46:17.39%:25:2.8033E-3:42:38:21:17:47 0/0:54:4:3:1:52:7.69%:59:5.8877E-2:42:48:25:23:52 0/0:42:5:4:1:59:8.47%:65:2.8614E-2:43:54:28:26:61 0/1:42:8:2:6:49:16.33%:25:2.8658E-3:44:41:29:12:49 0/0:60:2:2:0:33:6.06%:44:2.4615E-1:45:31:21:10:33 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:44:34:18:16:37 0/0:37:3:2:1:29:10.34%:31:1.1842E-1:50:26:18:8:29 0/0:43:3:2:1:65:4.62%:89:1.2209E-1:42:62:28:34:67 0/1:45:8:2:6:58:13.79%:25:3.0172E-3:42:50:28:22:60 0/0:41:4:2:2:66:6.06%:81:5.9648E-2:47:62:28:34:66 0/0:45:3:2:1:52:5.77%:66:1.2136E-1:44:49:19:30:53 0/0:36:4:1:3:54:7.41%:62:5.9012E-2:46:50:23:27:56 0/0:40:4:0:4:42:9.52%:43:5.801E-2:44:38:21:17:42 0/0:45:5:2:3:61:8.2%:68:2.87E-2:43:56:29:27:61 0/0:43:3:0:3:41:7.32%:50:1.2037E-1:40:38:16:22:42 0/0:42:5:2:3:46:10.87%:44:2.7874E-2:45:41:17:24:46 0/1:41:10:4:6:68:14.71%:31:6.8401E-4:41:58:24:34:68 0/0:42:4:3:1:66:6.06%:81:5.9648E-2:43:62:32:30:68 0/0:40:6:5:1:41:14.63%:33:1.2841E-2:47:35:20:15:42 0/0:36:4:2:2:67:5.97%:85:5.9691E-2:44:63:33:30:70 0/1:40:9:4:5:66:13.64%:28:1.4589E-3:43:57:32:25:68 0/0:50:5:5:0:54:9.26%:55:2.8371E-2:46:49:26:23:56 0/0:60:2:2:0:32:6.25%:40:2.4603E-1:45:30:11:19:32 0/0:38:7:5:2:86:8.14%:92:6.8813E-3:41:79:35:44:87 0/0:43:3:2:1:29:10.34%:31:1.1842E-1:46:26:15:11:29 0/0:52:3:2:1:32:9.38%:34:1.1905E-1:43:29:15:14:32 0/0:47:4:1:3:42:9.52%:43:5.801E-2:42:38:22:16:42 0/0:35:6:2:4:64:9.38%:65:1.3824E-2:45:58:29:29:65 0/1:37:8:5:3:53:15.09%:25:2.9389E-3:42:45:21:24:55 0/1:41:7:3:4:45:15.56%:22:6.0738E-3:42:38:18:20:45 0/0:38:5:0:5:69:7.25%:81:2.8994E-2:46:64:33:31:69 0/0:44:3:1:2:58:5.17%:75:1.2174E-1:46:55:32:23:60 0/0:35:4:2:2:38:10.53%:37:5.7534E-2:45:34:17:17:39 0/0:41:6:2:4:47:12.77%:42:1.3188E-2:43:41:15:26:47 0/0:36:4:1:3:62:6.45%:75:5.9464E-2:42:58:25:33:63 0/0:60:2:2:0:35:5.71%:47:2.4638E-1:42:33:17:16:35 0/0:44:6:1:5:37:16.22%:28:1.2549E-2:42:31:15:16:37 0/1:46:8:3:5:54:14.81%:25:2.9557E-3:42:46:22:24:54 0/0:50:5:3:2:47:10.64%:47:2.7945E-2:48:42:19:23:47 0/1:47:11:6:5:59:18.64%:35:2.925E-4:45:48:19:29:60 0/0:52:3:1:2:35:8.57%:40:1.1957E-1:43:32:18:14:35 0/0:37:5:3:2:27:18.52%:19:2.5527E-2:45:22:12:10:27 0/0:48:4:2:2:43:9.3%:47:5.8115E-2:49:39:20:19:45 0/0:37:1:1:0:32:3.12%:48:5E-1:49:31:13:18:32 0/0:60:2:1:1:18:11.11%:18:2.4286E-1:42:16:8:8:18 0/0:50:5:1:4:48:10.42%:46:2.8014E-2:49:43:23:20:49 0/0:37:4:0:4:72:5.56%:91:5.9887E-2:43:68:40:28:73 0/1:46:9:5:4:48:18.75%:28:1.2935E-3:42:39:18:21:49 0/1:41:10:4:6:73:13.7%:31:7.0212E-4:41:63:28:35:74 0/0:38:1:0:1:41:2.44%:66:5E-1:49:40:21:19:42 0/0:45:5:3:2:60:8.33%:65:2.8658E-2:43:55:25:30:60 0/1:40:7:3:4:45:15.56%:22:6.0738E-3:43:38:22:16:46 0/1:42:8:5:3:52:15.38%:25:2.9216E-3:44:44:25:19:52 0/0:39:7:5:2:84:8.33%:89:6.8597E-3:45:77:34:43:85 0/1:47:9:5:4:55:16.36%:28:1.3694E-3:43:46:27:19:56 0/0:48:2:0:2:50:4%:70:2.4747E-1:46:48:25:23:50 0/0:45:3:1:2:51:5.88%:66:1.2129E-1:42:48:19:29:52 0/1:39:8:3:5:55:14.55%:25:2.9718E-3:43:47:23:24:56 0/0:45:4:3:1:52:7.69%:59:5.8877E-2:45:48:22:26:54 0/0:52:3:1:2:22:13.64%:19:1.1628E-1:44:19:9:10:22 0/0:36:2:0:2:46:4.35%:63:2.4725E-1:46:44:26:18:47 0/0:60:3:2:1:34:8.82%:37:1.194E-1:47:31:15:16:35 0/0:51:5:2:3:40:12.5%:35:2.7371E-2:49:35:15:20:40 0/0:60:1:0:1:32:3.12%:48:5E-1:52:31:21:10:32 0/1:37:10:4:6:64:15.62%:31:6.6774E-4:40:54:26:28:64 0/0:42:5:1:4:45:11.11%:44:2.7799E-2:44:40:17:23:45 0/1:40:8:4:4:57:14.04%:25:3.0025E-3:45:49:19:30:57 0/0:42:4:2:2:37:10.81%:38:5.7399E-2:42:33:18:15:37 0/0:36:4:2:2:50:8%:55:5.8732E-2:41:46:24:22:52 0/0:44:3:1:2:46:6.52%:56:1.2088E-1:44:43:23:20:49 0/0:36:5:3:2:62:8.06%:68:2.8741E-2:42:57:24:33:64 0/1:40:12:5:7:59:20.34%:38:1.3121E-4:40:47:28:19:60 0/0:35:4:1:3:56:7.14%:65:5.9137E-2:44:52:20:32:57 0/1:43:8:2:6:69:11.59%:25:3.1516E-3:41:61:28:33:69 0/0:37:2:1:1:41:4.88%:57:2.4691E-1:42:39:18:21:44 0/1:39:8:5:3:58:13.79%:25:3.0172E-3:40:50:21:29:59 0/0:37:3:1:2:40:7.5%:46:1.2025E-1:43:37:18:19:41 0/0:45:3:0:3:52:5.77%:66:1.2136E-1:44:49:28:21:55 0/0:43:4:3:1:54:7.41%:62:5.9012E-2:45:50:23:27:56 0/0:44:6:5:1:56:10.71%:53:1.3571E-2:43:50:33:17:58 0/1:36:7:3:4:60:11.67%:21:6.4922E-3:46:53:25:28:60 0/0:36:7:2:5:76:9.21%:77:6.7622E-3:44:69:38:31:76 0/1:41:11:4:7:62:17.74%:35:3.0055E-4:41:51:25:26:63 0/0:45:6:1:5:48:12.5%:41:1.3237E-2:44:42:20:22:48 0/0:41:5:4:1:53:9.43%:56:2.8317E-2:40:48:27:21:54 0/1:39:11:5:6:64:17.19%:35:3.0557E-4:43:53:27:26:64 0/0:36:4:3:1:43:9.3%:47:5.8115E-2:39:39:18:21:44 0/1:36:9:1:8:65:13.85%:28:1.4519E-3:40:56:27:29:67 0/0:36:6:5:1:60:10%:59:1.3706E-2:38:54:25:29:63 0/0:0:0:0:0:52:0%:96:1E0:44:52:27:25:53 0/0:37:5:2:3:34:14.71%:27:2.6693E-2:39:29:12:17:38 0/0:37:4:3:1:74:5.41%:94:5.9958E-2:42:70:46:24:76 0/0:36:6:2:4:68:8.82%:71:1.3928E-2:41:62:33:29:68 0/1:35:8:4:4:56:14.29%:25:2.9874E-3:41:48:20:28:56 0/1:39:7:4:3:55:12.73%:21:6.377E-3:40:48:22:26:56 0/0:43:4:1:3:78:5.13%:99:6.0089E-2:39:74:35:39:79 0/0:37:5:2:3:39:12.82%:35:2.7273E-2:37:34:20:14:41 0/0:34:4:2:2:54:7.41%:62:5.9012E-2:39:50:25:25:57 0/1:37:10:6:4:59:16.95%:31:6.4469E-4:38:49:26:23:61 0/0:42:5:2:3:47:10.64%:47:2.7945E-2:40:42:28:14:48 0/0:36:6:2:4:52:11.54%:47:1.3417E-2:39:46:20:26:52 0/1:40:9:3:6:48:18.75%:28:1.2935E-3:41:39:19:20:49 0/1:38:13:8:5:61:21.31%:42:5.9784E-5:41:48:20:28:61 0/0:37:6:2:4:53:11.32%:50:1.3458E-2:39:47:23:24:56 0/0:37:4:2:2:43:9.3%:47:5.8115E-2:42:39:19:20:43 0/0:36:6:5:1:56:10.71%:53:1.3571E-2:40:50:23:27:57 0/0:48:2:1:1:41:4.88%:57:2.4691E-1:40:39:19:20:43 0/1:39:10:3:7:51:19.61%:32:5.9987E-4:40:41:29:12:53 0/1:36:10:3:7:56:17.86%:32:6.2917E-4:40:46:34:12:59 0/0:41:6:3:3:55:10.91%:53:1.3535E-2:45:49:29:20:57 0/0:37:5:3:2:49:10.2%:50:2.8079E-2:46:44:21:23:51 0/1:36:7:3:4:55:12.73%:21:6.377E-3:44:48:28:20:58 0/1:38:7:1:6:37:18.92%:22:5.721E-3:41:30:18:12:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:36:5:2:3:33:15.15%:27:2.6557E-2:39:28:19:9:35 0/0:41:4:0:4:44:9.09%:46:5.8215E-2:43:40:19:21:44 0/0:45:6:1:5:46:13.04%:39:1.3136E-2:38:40:16:24:46 0/1:42:8:4:4:28:28.57%:26:2.188E-3:39:20:11:9:28 0/0:48:4:1:3:36:11.11%:34:5.7257E-2:43:32:16:16:36 0/0:40:6:3:3:47:12.77%:42:1.3188E-2:43:41:21:20:47 0/1:45:8:4:4:52:15.38%:25:2.9216E-3:42:44:22:22:53 0/0:37:6:4:2:49:12.24%:44:1.3285E-2:40:43:23:20:50 MTB_anc 336081 . A G . PASS AC=36;AF=0.120;AN=300;ANN=G|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.230T>C|p.Val77Ala|230/2874|230/2874|77/957||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336081A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336081A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:45:11:4:7:75:14.67%:34:3.2907E-4:44:64:31:33:77 0/0:0:0:0:0:16:0%:29:1E0:52:16:5:11:16 0/0:46:6:4:2:53:11.32%:50:1.3458E-2:44:47:24:23:54 0/0:39:1:0:1:29:3.45%:45:5E-1:46:28:13:15:30 0/0:48:2:1:1:37:5.41%:50:2.4658E-1:44:35:18:17:37 0/0:42:3:1:2:35:8.57%:40:1.1957E-1:41:32:17:15:36 0/0:43:5:3:2:44:11.36%:41:2.7721E-2:48:39:25:14:44 0/0:42:4:3:1:41:9.76%:44:5.79E-2:45:37:16:21:43 0/1:49:8:2:6:53:15.09%:25:2.9389E-3:44:45:20:25:54 0/0:45:2:1:1:34:5.88%:43:2.4627E-1:52:32:13:19:34 0/0:39:2:0:2:42:4.76%:57:2.4699E-1:46:40:24:16:44 0/0:42:5:3:2:63:7.94%:71:2.878E-2:40:58:26:32:64 0/0:53:3:2:1:28:10.71%:28:1.1818E-1:49:25:13:12:28 0/0:37:5:2:3:62:8.06%:68:2.8741E-2:41:57:33:24:64 0/0:49:4:0:4:49:8.16%:56:5.8654E-2:44:45:20:25:50 0/0:49:6:2:4:53:11.32%:50:1.3458E-2:48:47:21:26:54 0/0:37:1:1:0:26:3.85%:38:5E-1:45:25:13:12:26 0/0:36:6:2:4:28:21.43%:16:1.1603E-2:43:22:11:11:29 0/0:33:4:4:0:31:12.9%:29:5.6405E-2:46:27:17:10:33 0/0:60:2:1:1:38:5.26%:50:2.4667E-1:47:36:14:22:38 0/0:37:6:2:4:41:14.63%:33:1.2841E-2:42:35:20:15:42 0/0:36:7:3:4:73:9.59%:74:6.7203E-3:44:66:33:33:73 0/0:52:3:1:2:30:10%:31:1.1864E-1:48:27:12:15:31 0/0:60:2:1:1:32:6.25%:40:2.4603E-1:46:30:12:18:34 0/0:43:4:2:2:61:6.56%:75:5.9414E-2:42:57:30:27:61 0/1:50:7:5:2:51:13.73%:22:6.2693E-3:45:44:23:21:51 0/0:47:2:1:1:34:5.88%:43:2.4627E-1:45:32:16:16:34 0/0:37:2:0:2:32:6.25%:40:2.4603E-1:44:30:12:18:32 0/1:43:8:4:4:46:17.39%:25:2.8033E-3:42:38:23:15:46 0/0:54:4:3:1:50:8%:55:5.8732E-2:42:46:24:22:51 0/0:43:4:3:1:57:7.02%:68:5.9196E-2:43:53:28:25:57 0/1:44:7:2:5:46:15.22%:22:6.1097E-3:44:39:27:12:46 0/0:60:2:2:0:31:6.45%:40:2.459E-1:44:29:20:9:32 0/0:49:2:1:1:31:6.45%:40:2.459E-1:46:29:15:14:33 0/0:36:3:2:1:27:11.11%:28:1.1792E-1:50:24:18:6:28 0/0:45:3:2:1:66:4.55%:89:1.2214E-1:42:63:26:37:67 0/1:45:8:3:5:58:13.79%:25:3.0172E-3:42:50:29:21:59 0/0:42:4:2:2:67:5.97%:85:5.9691E-2:46:63:29:34:67 0/0:40:3:2:1:54:5.56%:69:1.215E-1:44:51:21:30:54 0/0:38:4:1:3:53:7.55%:62:5.8946E-2:45:49:24:25:54 0/0:38:4:0:4:41:9.76%:44:5.79E-2:44:37:21:16:41 0/0:45:5:2:3:60:8.33%:65:2.8658E-2:44:55:28:27:60 0/0:49:2:0:2:41:4.88%:57:2.4691E-1:40:39:17:22:42 0/0:40:5:2:3:46:10.87%:44:2.7874E-2:45:41:17:24:46 0/1:41:10:4:6:64:15.62%:31:6.6774E-4:42:54:22:32:65 0/0:40:4:3:1:67:5.97%:85:5.9691E-2:41:63:32:31:68 0/0:35:6:5:1:42:14.29%:33:1.2905E-2:46:36:21:15:43 0/0:35:5:3:2:69:7.25%:81:2.8994E-2:42:64:34:30:70 0/1:43:7:4:3:66:10.61%:21:6.6083E-3:43:59:32:27:66 0/0:50:5:5:0:55:9.09%:59:2.8423E-2:45:50:27:23:55 0/0:60:2:2:0:30:6.67%:37:2.4576E-1:45:28:10:18:31 0/0:36:7:5:2:81:8.64%:86:6.8253E-3:41:74:35:39:85 0/0:37:3:2:1:28:10.71%:28:1.1818E-1:46:25:14:11:29 0/0:52:3:2:1:30:10%:31:1.1864E-1:44:27:15:12:31 0/0:43:4:1:3:40:10%:40:5.7784E-2:41:36:21:15:41 0/0:38:6:2:4:66:9.09%:68:1.3877E-2:44:60:28:32:67 0/1:38:7:4:3:56:12.5%:21:6.4016E-3:42:49:22:27:58 0/0:40:6:2:4:40:15%:30:1.2773E-2:44:34:17:17:44 0/0:38:5:0:5:66:7.58%:74:2.8892E-2:46:61:33:28:67 0/0:45:3:1:2:60:5%:79:1.2185E-1:45:57:34:23:60 0/0:37:3:2:1:38:7.89%:43:1.2E-1:44:35:19:16:38 0/0:39:6:2:4:44:13.64%:36:1.3026E-2:45:38:13:25:44 0/0:38:3:0:3:58:5.17%:75:1.2174E-1:44:55:25:30:59 0/0:60:2:2:0:32:6.25%:40:2.4603E-1:43:30:17:13:33 0/0:49:4:1:3:36:11.11%:34:5.7257E-2:42:32:15:17:37 0/1:47:7:2:5:51:13.73%:22:6.2693E-3:44:44:20:24:53 0/0:49:4:3:1:44:9.09%:46:5.8215E-2:49:40:17:23:44 0/1:44:11:6:5:58:18.97%:35:2.8966E-4:44:47:19:28:58 0/0:53:3:1:2:30:10%:31:1.1864E-1:46:27:17:10:30 0/0:34:5:3:2:29:17.24%:22:2.5917E-2:45:24:13:11:29 0/0:49:4:2:2:44:9.09%:46:5.8215E-2:47:40:20:20:47 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:33 0/0:60:2:1:1:17:11.76%:18:2.4242E-1:42:15:9:6:17 0/0:50:5:1:4:48:10.42%:46:2.8014E-2:50:43:24:19:48 0/0:39:4:0:4:69:5.8%:88:5.9773E-2:43:65:39:26:72 0/1:42:7:4:3:44:15.91%:22:6.0363E-3:42:37:18:19:46 0/1:42:10:4:6:68:14.71%:31:6.8401E-4:42:58:23:35:73 0/0:39:1:0:1:41:2.44%:66:5E-1:48:40:21:19:42 0/0:49:4:2:2:57:7.02%:68:5.9196E-2:43:53:24:29:59 0/1:40:7:3:4:48:14.58%:22:6.1774E-3:42:41:24:17:48 0/1:44:7:5:2:48:14.58%:22:6.1774E-3:45:41:24:17:49 0/0:36:8:6:2:85:9.41%:86:3.2878E-3:45:77:33:44:85 0/1:45:8:4:4:51:15.69%:25:2.9037E-3:42:43:26:17:51 0/0:38:2:0:2:49:4.08%:71:2.4742E-1:47:47:25:22:49 0/0:45:3:1:2:49:6.12%:63:1.2113E-1:43:46:20:26:50 0/1:39:8:3:5:56:14.29%:25:2.9874E-3:42:48:24:24:57 0/0:45:3:2:1:49:6.12%:63:1.2113E-1:44:46:20:26:52 0/0:53:3:1:2:19:15.79%:17:1.1486E-1:45:16:8:8:20 0/0:38:1:0:1:46:2.17%:73:5E-1:45:45:27:18:46 0/0:60:2:2:0:32:6.25%:40:2.4603E-1:47:30:13:17:32 0/0:51:5:2:3:40:12.5%:35:2.7371E-2:48:35:15:20:40 0/0:60:1:0:1:32:3.12%:48:5E-1:53:31:21:10:32 0/1:36:10:4:6:64:15.62%:31:6.6774E-4:39:54:27:27:64 0/0:41:5:1:4:43:11.63%:41:2.764E-2:44:38:15:23:45 0/1:40:8:4:4:54:14.81%:25:2.9557E-3:46:46:18:28:55 0/0:45:3:2:1:35:8.57%:40:1.1957E-1:42:32:18:14:35 0/0:36:4:2:2:50:8%:55:5.8732E-2:40:46:23:23:53 0/0:49:2:1:1:45:4.44%:64:2.4719E-1:44:43:23:20:46 0/0:38:5:2:3:60:8.33%:65:2.8658E-2:42:55:24:31:60 0/1:40:11:5:6:59:18.64%:35:2.925E-4:40:48:29:19:59 0/0:37:2:1:1:51:3.92%:74:2.4752E-1:43:49:18:31:53 0/1:43:8:2:6:66:12.12%:25:3.1191E-3:41:58:27:31:67 0/0:30:2:1:1:42:4.76%:57:2.4699E-1:42:40:17:23:45 0/1:38:8:5:3:59:13.56%:25:3.0313E-3:39:51:22:29:60 0/0:39:2:0:2:36:5.56%:47:2.4648E-1:42:34:17:17:39 0/0:40:5:2:3:56:8.93%:58:2.8473E-2:44:51:29:22:57 0/0:41:4:3:1:56:7.14%:65:5.9137E-2:45:52:24:28:56 0/0:45:6:5:1:57:10.53%:56:1.3607E-2:43:51:35:16:58 0/0:36:6:2:4:59:10.17%:59:1.3674E-2:44:53:25:28:60 0/0:37:4:2:2:71:5.63%:91:5.985E-2:44:67:38:29:71 0/1:39:10:4:6:61:16.39%:31:6.543E-4:40:51:25:26:64 0/0:45:6:1:5:48:12.5%:41:1.3237E-2:44:42:20:22:48 0/0:41:4:3:1:50:8%:55:5.8732E-2:40:46:27:19:51 0/1:38:8:3:5:62:12.9%:25:3.0712E-3:42:54:29:25:62 0/0:35:4:3:1:36:11.11%:34:5.7257E-2:40:32:17:15:38 0/1:38:8:1:7:62:12.9%:25:3.0712E-3:40:54:25:29:64 0/0:32:6:5:1:58:10.34%:56:1.3641E-2:38:52:26:26:63 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:52 0/0:36:5:2:3:36:13.89%:29:2.6944E-2:40:31:12:19:37 0/0:36:4:3:1:74:5.41%:94:5.9958E-2:42:70:44:26:77 0/0:38:6:2:4:65:9.23%:68:1.3851E-2:41:59:33:26:66 0/1:37:7:4:3:54:12.96%:21:6.3515E-3:41:47:21:26:55 0/1:37:7:4:3:51:13.73%:22:6.2693E-3:41:44:21:23:52 0/0:44:4:1:3:76:5.26%:97:6.0025E-2:39:72:33:39:78 0/0:37:5:2:3:37:13.51%:32:2.706E-2:37:32:19:13:38 0/0:37:5:3:2:55:9.09%:59:2.8423E-2:40:50:24:26:57 0/1:35:10:6:4:58:17.24%:31:6.3967E-4:39:48:26:22:61 0/0:35:5:2:3:45:11.11%:44:2.7799E-2:40:40:28:12:48 0/0:38:5:2:3:47:10.64%:47:2.7945E-2:39:42:18:24:49 0/1:37:9:3:6:47:19.15%:28:1.2811E-3:41:38:20:18:49 0/1:36:12:7:5:58:20.69%:38:1.2966E-4:40:46:16:30:59 0/0:36:6:2:4:51:11.76%:47:1.3375E-2:39:45:22:23:54 0/0:36:4:2:2:42:9.52%:43:5.801E-2:41:38:19:19:42 0/0:35:5:4:1:55:9.09%:59:2.8423E-2:40:50:22:28:59 0/0:45:2:1:1:43:4.65%:60:2.4706E-1:40:41:20:21:44 0/1:38:10:3:7:53:18.87%:32:6.1215E-4:39:43:29:14:53 0/1:35:10:3:7:55:18.18%:32:6.2367E-4:39:45:32:13:57 0/0:38:6:3:3:53:11.32%:50:1.3458E-2:43:47:29:18:53 0/0:35:5:3:2:53:9.43%:52:2.8261E-2:45:47:24:23:53 0/1:37:8:3:5:59:13.56%:25:3.0313E-3:41:51:26:25:61 0/1:40:7:1:6:37:18.92%:22:5.721E-3:40:30:16:14:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:36:4:2:2:36:11.11%:34:5.7257E-2:40:32:21:11:36 0/0:44:4:0:4:45:8.89%:50:5.8311E-2:43:41:19:22:46 0/0:45:6:1:5:46:13.04%:39:1.3136E-2:38:40:17:23:47 0/1:44:7:4:3:28:25%:22:5.1054E-3:38:21:11:10:28 0/0:49:4:1:3:36:11.11%:34:5.7257E-2:43:32:17:15:36 0/0:42:5:3:2:44:11.36%:41:2.7721E-2:43:39:19:20:45 0/1:45:8:4:4:50:16%:25:2.8851E-3:41:42:21:21:51 0/0:35:6:4:2:49:12.24%:44:1.3285E-2:40:43:23:20:50 MTB_anc 336082 . C T . PASS AC=33;AF=0.110;AN=300;ANN=T|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.229G>A|p.Val77Met|229/2874|229/2874|77/957||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336082C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336082C>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:46:10:4:6:76:13.16%:31:7.1196E-4:43:66:32:34:78 0/0:0:0:0:0:16:0%:29:1E0:53:16:5:11:16 0/0:47:6:4:2:53:11.32%:50:1.3458E-2:44:47:23:24:53 0/0:38:1:0:1:30:3.33%:44:5E-1:46:29:14:15:30 0/0:48:2:1:1:37:5.41%:50:2.4658E-1:44:35:18:17:37 0/0:43:3:1:2:35:8.57%:40:1.1957E-1:42:32:16:16:36 0/0:42:5:3:2:44:11.36%:41:2.7721E-2:48:39:25:14:44 0/0:41:4:3:1:41:9.76%:44:5.79E-2:46:37:16:21:42 0/1:47:8:2:6:54:14.81%:25:2.9557E-3:44:46:20:26:54 0/0:46:2:1:1:34:5.88%:43:2.4627E-1:53:32:13:19:34 0/0:39:2:0:2:41:4.88%:57:2.4691E-1:47:39:23:16:44 0/0:42:5:3:2:64:7.81%:71:2.8819E-2:40:59:27:32:64 0/0:53:3:2:1:28:10.71%:28:1.1818E-1:49:25:13:12:28 0/0:36:4:2:2:62:6.45%:75:5.9464E-2:41:58:32:26:64 0/0:49:4:0:4:49:8.16%:56:5.8654E-2:45:45:20:25:50 0/0:49:6:2:4:54:11.11%:50:1.3497E-2:48:48:21:27:54 0/0:37:1:1:0:26:3.85%:38:5E-1:45:25:13:12:26 0/1:35:7:3:4:29:24.14%:22:5.1909E-3:43:22:11:11:29 0/0:37:1:1:0:30:3.33%:44:5E-1:45:29:19:10:33 0/0:60:2:1:1:37:5.41%:50:2.4658E-1:48:35:14:21:38 0/0:35:6:2:4:41:14.63%:33:1.2841E-2:42:35:21:14:42 0/0:36:7:3:4:73:9.59%:74:6.7203E-3:44:66:33:33:73 0/0:51:3:1:2:29:10.34%:31:1.1842E-1:49:26:11:15:31 0/0:56:2:1:1:34:5.88%:43:2.4627E-1:45:32:14:18:34 0/0:40:4:2:2:61:6.56%:75:5.9414E-2:43:57:30:27:61 0/1:49:7:5:2:51:13.73%:22:6.2693E-3:46:44:23:21:51 0/0:44:2:1:1:34:5.88%:43:2.4627E-1:44:32:16:16:34 0/0:38:1:0:1:31:3.23%:48:5E-1:44:30:12:18:32 0/1:43:8:4:4:46:17.39%:25:2.8033E-3:42:38:23:15:46 0/0:53:4:3:1:50:8%:55:5.8732E-2:43:46:25:21:51 0/0:43:4:3:1:57:7.02%:68:5.9196E-2:43:53:28:25:57 0/1:44:7:2:5:46:15.22%:22:6.1097E-3:44:39:27:12:46 0/0:60:2:2:0:32:6.25%:40:2.4603E-1:44:30:21:9:32 0/0:49:2:1:1:33:6.06%:44:2.4615E-1:45:31:17:14:33 0/0:37:3:2:1:28:10.71%:28:1.1818E-1:49:25:19:6:28 0/0:49:2:1:1:66:3.03%:98:2.4809E-1:42:64:27:37:67 0/1:44:8:3:5:59:13.56%:25:3.0313E-3:42:51:29:22:59 0/0:45:3:1:2:65:4.62%:89:1.2209E-1:47:62:29:33:66 0/0:43:3:2:1:54:5.56%:69:1.215E-1:44:51:21:30:54 0/0:37:4:1:3:53:7.55%:62:5.8946E-2:46:49:24:25:54 0/0:38:3:0:3:40:7.5%:46:1.2025E-1:43:37:21:16:42 0/0:45:5:2:3:60:8.33%:65:2.8658E-2:44:55:28:27:60 0/0:49:2:0:2:42:4.76%:57:2.4699E-1:41:40:17:23:42 0/0:42:4:1:3:44:9.09%:46:5.8215E-2:45:40:17:23:45 0/1:38:10:4:6:64:15.62%:31:6.6774E-4:42:54:23:31:65 0/0:38:4:3:1:67:5.97%:85:5.9691E-2:42:63:32:31:68 0/0:35:6:5:1:42:14.29%:33:1.2905E-2:47:36:21:15:43 0/0:32:5:3:2:70:7.14%:80:2.9026E-2:43:65:35:30:70 0/1:45:8:4:4:64:12.5%:25:3.0959E-3:44:56:31:25:66 0/0:53:4:4:0:54:7.41%:62:5.9012E-2:45:50:27:23:55 0/0:54:2:2:0:31:6.45%:40:2.459E-1:45:29:11:18:31 0/0:37:6:4:2:83:7.23%:96:1.4231E-2:41:77:37:40:85 0/0:34:3:2:1:29:10.34%:31:1.1842E-1:47:26:15:11:29 0/0:52:3:2:1:31:9.68%:34:1.1885E-1:44:28:16:12:31 0/0:42:5:2:3:40:12.5%:35:2.7371E-2:42:35:21:14:41 0/0:37:5:1:4:65:7.69%:74:2.8856E-2:44:60:28:32:66 0/0:39:6:4:2:55:10.91%:53:1.3535E-2:42:49:22:27:57 0/0:40:5:2:3:40:12.5%:35:2.7371E-2:44:35:18:17:44 0/0:37:5:0:5:68:7.35%:77:2.8961E-2:46:63:35:28:68 0/0:43:3:1:2:59:5.08%:79:1.2179E-1:45:56:34:22:59 0/0:35:3:2:1:37:8.11%:43:1.1986E-1:45:34:19:15:38 0/0:38:6:2:4:44:13.64%:36:1.3026E-2:45:38:13:25:44 0/0:38:3:0:3:59:5.08%:79:1.2179E-1:44:56:25:31:59 0/0:60:2:2:0:32:6.25%:40:2.4603E-1:43:30:16:14:32 0/0:46:4:1:3:37:10.81%:38:5.7399E-2:42:33:16:17:37 0/1:44:8:3:5:52:15.38%:25:2.9216E-3:44:44:20:24:53 0/0:49:4:3:1:44:9.09%:46:5.8215E-2:50:40:17:23:44 0/1:45:10:5:5:57:17.54%:31:6.345E-4:44:47:19:28:58 0/0:52:3:1:2:29:10.34%:31:1.1842E-1:46:26:17:9:30 0/0:35:3:1:2:27:11.11%:28:1.1792E-1:45:24:13:11:29 0/0:49:4:2:2:47:8.51%:53:5.849E-2:48:43:20:23:47 0/0:26:1:1:0:33:3.03%:52:5E-1:48:32:14:18:33 0/0:60:2:1:1:17:11.76%:18:2.4242E-1:42:15:9:6:17 0/0:54:4:1:3:47:8.51%:53:5.849E-2:50:43:24:19:48 0/0:37:4:0:4:70:5.71%:88:5.9812E-2:43:66:39:27:70 0/1:43:7:4:3:46:15.22%:22:6.1097E-3:43:39:18:21:46 0/1:42:10:4:6:73:13.7%:31:7.0212E-4:41:63:27:36:74 0/0:39:1:0:1:42:2.38%:66:5E-1:48:41:21:20:42 0/0:46:4:2:2:58:6.9%:68:5.9254E-2:43:54:26:28:58 0/0:41:6:2:4:47:12.77%:42:1.3188E-2:42:41:24:17:48 0/1:43:7:5:2:48:14.58%:22:6.1774E-3:45:41:24:17:48 0/0:36:7:5:2:83:8.43%:89:6.8485E-3:46:76:33:43:84 0/1:46:7:4:3:50:14%:22:6.2398E-3:43:43:26:17:52 0/0:39:2:0:2:48:4.17%:67:2.4737E-1:47:46:24:22:48 0/0:43:3:1:2:50:6%:62:1.2121E-1:43:47:20:27:50 0/1:40:7:2:5:56:12.5%:21:6.4016E-3:42:49:25:24:57 0/0:44:3:2:1:49:6.12%:63:1.2113E-1:45:46:22:24:51 0/0:53:3:1:2:20:15%:16:1.1538E-1:45:17:8:9:20 0/0:38:1:0:1:45:2.22%:73:5E-1:46:44:27:17:45 0/0:60:2:2:0:31:6.45%:40:2.459E-1:47:29:13:16:31 0/0:51:5:2:3:40:12.5%:35:2.7371E-2:48:35:15:20:40 0/0:60:1:0:1:32:3.12%:48:5E-1:53:31:21:10:32 0/1:37:10:4:6:62:16.13%:31:6.5891E-4:39:52:26:26:64 0/0:39:5:1:4:45:11.11%:44:2.7799E-2:44:40:17:23:45 0/1:40:8:4:4:55:14.55%:25:2.9718E-3:46:47:18:29:55 0/0:48:2:1:1:34:5.88%:43:2.4627E-1:42:32:18:14:35 0/0:36:3:1:2:51:5.88%:66:1.2129E-1:40:48:25:23:53 0/0:49:2:1:1:46:4.35%:63:2.4725E-1:44:44:24:20:46 0/0:38:5:2:3:58:8.62%:62:2.8569E-2:43:53:23:30:59 0/1:39:11:5:6:59:18.64%:35:2.925E-4:40:48:29:19:59 0/0:37:2:1:1:52:3.85%:74:2.4757E-1:44:50:19:31:53 0/1:43:8:2:6:67:11.94%:25:3.1302E-3:41:59:27:32:67 0/0:32:3:2:1:44:6.82%:53:1.2069E-1:42:41:17:24:45 0/1:36:8:5:3:57:14.04%:25:3.0025E-3:39:49:21:28:59 0/0:39:2:0:2:35:5.71%:47:2.4638E-1:43:33:17:16:39 0/0:34:4:2:2:55:7.27%:65:5.9076E-2:44:51:28:23:57 0/0:39:4:3:1:56:7.14%:65:5.9137E-2:45:52:24:28:56 0/0:44:6:5:1:58:10.34%:56:1.3641E-2:43:52:35:17:58 0/0:36:6:2:4:60:10%:59:1.3706E-2:45:54:26:28:60 0/0:37:4:2:2:71:5.63%:88:5.9812E-2:45:66:38:28:71 0/1:40:10:4:6:61:16.39%:31:6.543E-4:40:51:24:27:63 0/0:44:6:1:5:48:12.5%:41:1.3237E-2:44:42:20:22:48 0/0:40:4:3:1:51:7.84%:59:5.8806E-2:41:47:28:19:51 0/1:38:8:3:5:62:12.9%:25:3.0712E-3:42:54:29:25:62 0/0:36:3:2:1:37:8.11%:43:1.1986E-1:41:34:17:17:38 0/1:38:8:1:7:62:12.9%:25:3.0712E-3:40:54:24:30:64 0/0:37:6:5:1:61:9.84%:62:1.3737E-2:38:55:26:29:62 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:51 0/0:31:5:2:3:36:13.89%:29:2.6944E-2:40:31:12:19:37 0/0:37:3:2:1:72:4.17%:99:1.2238E-1:42:69:43:26:77 0/0:37:5:1:4:63:7.94%:71:2.878E-2:41:58:32:26:64 0/0:38:5:2:3:53:9.43%:56:2.8317E-2:41:48:21:27:55 0/0:38:6:3:3:50:12%:44:1.3331E-2:42:44:22:22:51 0/0:43:4:1:3:78:5.13%:99:6.0089E-2:39:74:35:39:79 0/0:36:5:2:3:38:13.16%:32:2.7169E-2:37:33:19:14:38 0/0:38:3:1:2:52:5.77%:66:1.2136E-1:40:49:23:26:56 0/1:35:9:5:4:58:15.52%:28:1.3968E-3:38:49:26:23:61 0/0:38:5:2:3:48:10.42%:46:2.8014E-2:40:43:29:14:48 0/0:37:5:2:3:48:10.42%:46:2.8014E-2:39:43:19:24:49 0/1:39:7:3:4:44:15.91%:22:6.0363E-3:41:37:19:18:47 0/1:36:11:6:5:57:19.3%:35:2.8674E-4:41:46:17:29:58 0/0:36:6:2:4:52:11.54%:47:1.3417E-2:39:46:22:24:52 0/0:38:4:2:2:41:9.76%:44:5.79E-2:42:37:19:18:42 0/0:34:5:4:1:59:8.47%:65:2.8614E-2:40:54:25:29:59 0/0:46:2:1:1:43:4.65%:60:2.4706E-1:40:41:20:21:43 0/1:38:10:3:7:51:19.61%:32:5.9987E-4:40:41:29:12:52 0/1:35:9:3:6:57:15.79%:28:1.388E-3:39:48:34:14:57 0/0:40:6:3:3:53:11.32%:50:1.3458E-2:43:47:29:18:53 0/0:36:4:2:2:52:7.69%:59:5.8877E-2:46:48:24:24:53 0/1:37:8:3:5:60:13.33%:25:3.045E-3:42:52:28:24:61 0/1:41:7:1:6:38:18.42%:22:5.7727E-3:40:31:17:14:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:36:4:2:2:36:11.11%:34:5.7257E-2:40:32:21:11:36 0/0:44:4:0:4:45:8.89%:50:5.8311E-2:43:41:18:23:46 0/0:45:6:1:5:47:12.77%:42:1.3188E-2:38:41:18:23:47 0/1:44:7:4:3:27:25.93%:22:5.0143E-3:39:20:10:10:28 0/0:45:4:1:3:36:11.11%:34:5.7257E-2:43:32:17:15:36 0/0:42:5:3:2:45:11.11%:44:2.7799E-2:43:40:20:20:45 0/1:45:8:4:4:50:16%:25:2.8851E-3:42:42:22:20:51 0/0:37:4:2:2:48:8.33%:52:5.8574E-2:40:44:24:20:50 MTB_anc 336113 . G A . PASS AC=16;AF=0.053;AN=300;ANN=A|synonymous_variant|LOW|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.198C>T|p.Ser66Ser|198/2874|198/2874|66/957||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336113G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336113G>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:7:3:4:67:10.45%:21:6.6257E-3:43:60:31:29:68 0/0:0:0:0:0:16:0%:29:1E0:51:16:4:12:16 0/0:54:4:2:2:51:7.84%:59:5.8806E-2:47:47:25:22:51 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:38:1:1:0:33:3.03%:52:5E-1:46:32:17:15:33 0/0:38:2:1:1:37:5.41%:50:2.4658E-1:43:35:20:15:37 0/0:36:4:2:2:43:9.3%:47:5.8115E-2:48:39:23:16:43 0/0:33:2:2:0:39:5.13%:54:2.4675E-1:47:37:15:22:40 0/0:39:6:1:5:46:13.04%:39:1.3136E-2:44:40:19:21:48 0/0:60:1:0:1:30:3.33%:44:5E-1:52:29:10:19:30 0/0:35:2:0:2:44:4.55%:60:2.4713E-1:47:42:23:19:45 0/0:38:4:3:1:59:6.78%:72:5.9309E-2:43:55:25:30:59 0/0:60:1:1:0:22:4.55%:31:5E-1:50:21:11:10:22 0/0:31:3:2:1:63:4.76%:86:1.22E-1:43:60:34:26:63 0/0:37:1:0:1:39:2.56%:62:5E-1:45:38:15:23:40 0/0:39:5:2:3:53:9.43%:56:2.8317E-2:48:48:21:27:53 0/0:37:1:1:0:24:4.17%:34:5E-1:45:23:14:9:24 0/0:34:4:2:2:27:14.81%:23:5.5494E-2:43:23:13:10:28 0/0:37:2:2:0:30:6.67%:37:2.4576E-1:44:28:19:9:31 0/0:48:2:1:1:34:5.88%:43:2.4627E-1:46:32:13:19:35 0/0:35:5:1:4:38:13.16%:32:2.7169E-2:41:33:20:13:38 0/0:36:6:2:4:70:8.57%:74:1.3976E-2:43:64:30:34:70 0/0:47:3:1:2:27:11.11%:28:1.1792E-1:45:24:11:13:28 0/0:39:1:0:1:31:3.23%:44:5E-1:43:29:12:17:31 0/0:45:2:0:2:55:3.64%:81:2.4771E-1:43:53:29:24:55 0/0:47:6:4:2:46:13.04%:39:1.3136E-2:44:40:24:16:46 0/0:35:1:0:1:29:3.45%:45:5E-1:45:28:12:16:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:42:4:2:2:36:11.11%:34:5.7257E-2:44:32:19:13:36 0/0:49:4:3:1:46:8.7%:49:5.8402E-2:43:42:23:19:48 0/0:43:3:3:0:53:5.66%:69:1.2143E-1:44:50:26:24:54 0/1:41:7:2:5:39:17.95%:22:5.8219E-3:44:32:21:11:39 0/0:60:1:1:0:26:3.85%:38:5E-1:44:25:17:8:28 0/0:37:1:0:1:34:2.94%:51:5E-1:45:33:17:16:34 0/0:37:3:2:1:32:9.38%:34:1.1905E-1:48:29:20:9:32 0/0:43:3:2:1:57:5.26%:76:1.2168E-1:44:54:24:30:58 0/0:42:4:1:3:49:8.16%:56:5.8654E-2:42:45:25:20:49 0/0:44:3:2:1:60:5%:79:1.2185E-1:46:57:30:27:60 0/0:39:2:1:1:53:3.77%:78:2.4762E-1:44:51:21:30:53 0/0:38:3:0:3:53:5.66%:69:1.2143E-1:45:50:23:27:53 0/0:37:3:0:3:38:7.89%:43:1.2E-1:43:35:21:14:38 0/0:48:4:2:2:58:6.9%:68:5.9254E-2:43:54:29:25:58 0/0:49:2:0:2:36:5.56%:47:2.4648E-1:42:34:14:20:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:36 0/1:42:8:4:4:54:14.81%:25:2.9557E-3:41:46:20:26:56 0/0:41:5:3:2:62:8.06%:68:2.8741E-2:40:57:31:26:63 0/0:37:4:3:1:41:9.76%:44:5.79E-2:44:37:20:17:42 0/0:38:4:2:2:63:6.35%:78:5.9512E-2:42:59:34:25:67 0/0:41:6:3:3:64:9.38%:65:1.3824E-2:42:58:34:24:64 0/0:54:4:4:0:54:7.41%:62:5.9012E-2:44:50:26:24:54 0/0:60:1:1:0:29:3.45%:45:5E-1:46:28:11:17:30 0/0:37:2:2:0:79:2.53%:99:2.4841E-1:42:77:37:40:83 0/0:37:3:2:1:29:10.34%:31:1.1842E-1:46:26:14:12:30 0/0:49:2:2:0:21:9.52%:25:2.439E-1:43:19:11:8:22 0/0:43:4:1:3:37:10.81%:38:5.7399E-2:40:33:21:12:39 0/0:37:5:2:3:64:7.81%:71:2.8819E-2:43:59:26:33:65 0/1:40:7:4:3:51:13.73%:22:6.2693E-3:42:44:19:25:51 0/0:41:5:2:3:44:11.36%:41:2.7721E-2:44:39:21:18:45 0/0:39:3:0:3:64:4.69%:86:1.2205E-1:45:61:34:27:65 0/0:38:1:0:1:51:1.96%:84:5E-1:46:50:32:18:51 0/0:36:3:3:0:41:7.32%:50:1.2037E-1:46:38:21:17:41 0/0:39:3:1:2:38:7.89%:43:1.2E-1:45:35:10:25:39 0/0:34:2:0:2:53:3.77%:78:2.4762E-1:43:51:25:26:54 0/0:60:2:2:0:32:6.25%:40:2.4603E-1:43:30:18:12:33 0/0:38:3:0:3:37:8.11%:43:1.1986E-1:45:34:16:18:37 0/1:40:7:3:4:52:13.46%:22:6.2977E-3:46:45:23:22:53 0/0:37:3:2:1:40:7.5%:46:1.2025E-1:47:37:14:23:40 0/1:44:9:4:5:54:16.67%:28:1.3596E-3:45:45:19:26:55 0/0:49:2:1:1:26:7.69%:30:2.451E-1:44:24:17:7:26 0/0:35:3:2:1:24:12.5%:22:1.1702E-1:44:21:11:10:24 0/0:38:2:1:1:42:4.76%:57:2.4699E-1:47:40:17:23:42 0/0:0:0:0:0:27:0%:52:1E0:51:27:12:15:27 0/0:60:2:1:1:19:10.53%:21:2.4324E-1:42:17:13:4:19 0/0:47:4:1:3:44:9.09%:46:5.8215E-2:49:40:25:15:44 0/0:35:2:0:2:67:2.99%:99:2.4812E-1:42:65:38:27:67 0/0:39:4:3:1:46:8.7%:49:5.8402E-2:42:42:19:23:47 0/0:41:6:3:3:68:8.82%:71:1.3928E-2:40:62:27:35:70 0/0:39:1:0:1:42:2.38%:66:5E-1:48:41:21:20:42 0/0:42:3:2:1:55:5.45%:73:1.2156E-1:43:52:25:27:55 0/0:43:4:1:3:47:8.51%:53:5.849E-2:43:43:27:16:47 0/0:45:6:4:2:46:13.04%:39:1.3136E-2:42:40:22:18:47 0/0:34:7:5:2:79:8.86%:83:6.801E-3:43:72:33:39:79 0/0:43:3:2:1:39:7.69%:47:1.2013E-1:41:36:21:15:41 0/0:37:2:0:2:45:4.44%:64:2.4719E-1:47:43:23:20:45 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:41 0/0:37:6:3:3:52:11.54%:47:1.3417E-2:41:46:26:20:53 0/0:45:3:2:1:49:6.12%:63:1.2113E-1:43:46:22:24:49 0/0:49:2:1:1:19:10.53%:21:2.4324E-1:45:17:9:8:19 0/0:37:1:1:0:40:2.5%:62:5E-1:45:39:22:17:41 0/0:46:2:2:0:27:7.41%:34:2.4528E-1:45:25:11:14:27 0/0:37:4:1:3:40:10%:40:5.7784E-2:47:36:16:20:40 0/0:60:1:0:1:29:3.45%:45:5E-1:51:28:18:10:29 0/1:37:7:2:5:63:11.11%:21:6.5529E-3:40:56:30:26:63 0/0:37:3:1:2:43:6.98%:53:1.2059E-1:44:40:17:23:45 0/1:40:7:4:3:53:13.21%:21:6.3251E-3:45:46:17:29:54 0/0:34:2:1:1:31:6.45%:40:2.459E-1:41:29:16:13:31 0/0:35:4:2:2:44:9.09%:46:5.8215E-2:41:40:17:23:47 0/0:49:2:1:1:47:4.26%:67:2.4731E-1:44:45:24:21:47 0/0:35:5:2:3:55:9.09%:59:2.8423E-2:42:50:24:26:56 0/1:38:10:5:5:56:17.86%:32:6.2917E-4:39:46:28:18:56 0/0:37:1:1:0:47:2.13%:77:5E-1:41:46:18:28:47 0/0:43:4:1:3:61:6.56%:75:5.9414E-2:40:57:24:33:61 0/0:36:3:2:1:43:6.98%:53:1.2059E-1:42:40:17:23:44 0/1:40:7:5:2:53:13.21%:21:6.3251E-3:40:46:18:28:54 0/0:35:2:0:2:31:6.45%:40:2.459E-1:44:29:18:11:31 0/0:36:3:0:3:51:5.88%:66:1.2129E-1:45:48:25:23:51 0/0:37:1:1:0:44:2.27%:69:5E-1:46:43:22:21:44 0/0:46:5:4:1:56:8.93%:58:2.8473E-2:42:51:32:19:57 0/0:38:2:0:2:53:3.77%:78:2.4762E-1:47:51:22:29:53 0/0:37:1:1:0:59:1.69%:98:5E-1:44:58:34:24:60 0/1:39:7:3:4:50:14%:22:6.2398E-3:40:43:20:23:53 0/0:43:4:1:3:46:8.7%:50:5.8311E-2:44:41:18:23:46 0/0:37:2:2:0:42:4.76%:57:2.4699E-1:40:40:24:16:46 0/1:38:7:2:5:57:12.28%:21:6.4254E-3:42:50:28:22:60 0/0:37:4:3:1:39:10.26%:41:5.7662E-2:40:35:17:18:39 0/0:37:5:0:5:52:9.62%:52:2.8261E-2:41:47:21:26:55 0/0:37:3:2:1:46:6.52%:56:1.2088E-1:39:43:21:22:51 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:53 0/0:32:3:1:2:32:9.38%:34:1.1905E-1:40:29:13:16:34 0/0:37:4:3:1:73:5.48%:95:5.9923E-2:41:69:40:29:74 0/0:37:3:1:2:63:4.76%:86:1.22E-1:40:60:35:25:65 0/0:37:6:3:3:48:12.5%:41:1.3237E-2:41:42:19:23:48 0/0:34:2:1:1:35:5.71%:47:2.4638E-1:42:33:18:15:40 0/0:38:3:1:2:69:4.35%:96:1.2226E-1:40:66:32:34:72 0/0:37:4:2:2:36:11.11%:34:5.7257E-2:39:32:19:13:39 0/0:37:3:2:1:48:6.25%:59:1.2105E-1:41:45:21:24:51 0/1:36:7:4:3:48:14.58%:22:6.1774E-3:39:41:25:16:51 0/0:36:6:3:3:47:12.77%:42:1.3188E-2:39:41:27:14:48 0/0:35:4:2:2:48:8.33%:52:5.8574E-2:40:44:20:24:49 0/0:40:6:3:3:49:12.24%:44:1.3285E-2:40:43:22:21:49 0/1:36:9:5:4:47:19.15%:28:1.2811E-3:41:38:13:25:51 0/0:38:4:2:2:45:8.89%:50:5.8311E-2:39:41:22:19:46 0/0:35:3:2:1:42:7.14%:49:1.2048E-1:41:39:20:19:43 0/0:37:5:5:0:53:9.43%:56:2.8317E-2:39:48:21:27:57 0/0:49:2:1:1:33:6.06%:44:2.4615E-1:40:31:18:13:34 0/0:37:6:3:3:44:13.64%:36:1.3026E-2:40:38:24:14:45 0/0:36:5:3:2:48:10.42%:46:2.8014E-2:38:43:29:14:50 0/0:41:5:2:3:51:9.8%:53:2.8203E-2:44:46:28:18:51 0/0:35:5:3:2:47:10.64%:47:2.7945E-2:45:42:20:22:48 0/1:38:7:3:4:56:12.5%:21:6.4016E-3:42:49:26:23:56 0/1:41:7:1:6:40:17.5%:22:5.8688E-3:41:33:21:12:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:33 0/0:37:2:2:0:32:6.25%:40:2.4603E-1:40:30:20:10:32 0/0:41:4:0:4:50:8%:55:5.8732E-2:41:46:22:24:50 0/0:41:5:1:4:40:12.5%:35:2.7371E-2:38:35:16:19:41 0/0:37:4:3:1:26:15.38%:20:5.5222E-2:42:22:11:11:28 0/0:36:4:1:3:40:10%:40:5.7784E-2:41:36:17:19:40 0/0:36:3:2:1:41:7.32%:50:1.2037E-1:43:38:19:19:42 0/0:37:6:3:3:51:11.76%:47:1.3375E-2:41:45:21:24:52 0/0:35:5:3:2:50:10%:49:2.8142E-2:39:45:22:23:52 MTB_anc 336191 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0278c_Rv0278c|gene289|transcript|Transcript_gene289|Coding|1/1|c.120G>A|p.Met40Ile|120/2874|120/2874|40/957||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336191C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336191C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:55:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:53:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:35:19:16:36:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:66:31:35:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:47:26:21:48:97.92%:99:7.6145E-27:38:1:0:1:49 1/1:47:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:45:19:26:46:97.83%:99:1.1441E-25:60:1:1:0:46 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:49:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:48:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:35:18:17:36:97.22%:99:8.3613E-20:60:1:0:1:36 1/1:51:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:32:19:13:33:96.97%:99:4.7095E-18:60:1:0:1:34 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 336687 . G A . PASS AC=96;AF=1.00;AN=96;ANN=A|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2387C>T|p.Ser796Phe|2387/2514|2387/2514|796/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336687G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336687G>A||||||;HET=0;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:12:12:0:13:92.31%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336688 . A C . PASS AC=90;AF=1.00;AN=90;ANN=C|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2386T>G|p.Ser796Ala|2386/2514|2386/2514|796/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336688A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336688A>C||||||;HET=0;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:12:0:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336691 . T C . PASS AC=88;AF=0.978;AN=90;ANN=C|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2383A>G|p.Ser795Gly|2383/2514|2383/2514|795/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336691T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336691T>C||||||;WT=0;set-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:12:12:0:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:37:6:5:1:7:85.71%:26:2.331E-3:37:1:0:1:7 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:5:1:7:85.71%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336692 . C G . PASS AC=90;AF=1.00;AN=90;ANN=G|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2382G>C|p.Ser794Ser|2382/2514|2382/2514|794/837||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336692C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336692C>G||||||;HET=0;WT=0;set-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:12:0:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336693 . G C . PASS AC=84;AF=1.00;AN=84;ANN=C|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2381C>G|p.Ser794Trp|2381/2514|2381/2514|794/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336693G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336693G>C||||||;HET=0;WT=0;set-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:12:0:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336694 . A C . PASS AC=88;AF=1.00;AN=88;ANN=C|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2380T>G|p.Ser794Ala|2380/2514|2380/2514|794/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336694A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336694A>C||||||;HET=0;WT=0;set-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:11:0:12:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336698 . C G . PASS AC=80;AF=1.00;AN=80;ANN=G|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2376G>C|p.Gly792Gly|2376/2514|2376/2514|792/837||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336698C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336698C>G||||||;HET=0;WT=0;set-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:12:12:0:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336701 . A G . PASS AC=86;AF=1.00;AN=86;ANN=G|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2373T>C|p.Gly791Gly|2373/2514|2373/2514|791/837||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336701A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336701A>G||||||;HET=0;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:11:0:12:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336707 . G A . PASS AC=92;AF=1.00;AN=92;ANN=A|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2367C>T|p.Asp789Asp|2367/2514|2367/2514|789/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336707G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336707G>A||||||;HET=0;WT=0;set-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:12:12:0:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336708 . T C . PASS AC=94;AF=1.00;AN=94;ANN=C|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2366A>G|p.Asp789Gly|2366/2514|2366/2514|789/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336708T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336708T>C||||||;HET=0;WT=0;set-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:12:0:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336712 . T C . PASS AC=102;AF=1.00;AN=102;ANN=C|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2362A>G|p.Thr788Ala|2362/2514|2362/2514|788/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336712T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336712T>C||||||;HET=0;WT=0;set-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:11:0:12:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:12:12:0:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 336728 . A G . PASS AC=172;AF=0.683;AN=252;ANN=G|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2346T>C|p.Gly782Gly|2346/2514|2346/2514|782/837||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336728A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336728A>G||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:34:8:7:1:12:66.67%:31:6.7304E-4:31:4:0:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:23:17:6:26:88.46%:99:7.3681E-12:33:3:0:3:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:8:8:0:10:80%:34:3.5723E-4:35:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:11:1:13:92.31%:58:1.3461E-6:32:1:0:1:17 0/1:36:7:4:3:9:77.78%:29:1.1312E-3:34:2:0:2:10 0/1:40:7:6:1:8:87.5%:31:6.993E-4:25:1:0:1:10 0/1:36:10:10:0:13:76.92%:42:5.3843E-5:31:3:0:3:14 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:34:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:21 0/1:37:8:6:2:9:88.89%:36:2.0568E-4:31:1:0:1:11 0/1:36:17:11:6:22:77.27%:74:3.8368E-8:33:5:0:5:23 0/1:35:6:4:2:8:75%:24:3.4965E-3:28:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:12:6:6:14:85.71%:55:2.9913E-6:32:2:0:2:18 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:12:8:4:13:92.31%:58:1.3461E-6:33:1:0:1:13 0/1:37:17:10:7:20:85%:78:1.2848E-8:31:3:0:3:20 0/1:37:9:8:1:11:81.82%:39:1.1057E-4:36:2:0:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:35:11:7:4:13:84.62%:49:1.0096E-5:32:2:0:2:13 0/1:36:9:6:3:14:64.29%:35:2.8986E-4:31:5:0:5:14 1/1:35:14:9:5:15:93.33%:69:1.0315E-7:34:1:0:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:13:7:6:15:86.67%:60:8.7675E-7:31:2:0:2:16 0/1:39:7:4:3:8:87.5%:31:6.993E-4:38:1:0:1:9 1/1:36:11:8:3:12:91.67%:53:4.8074E-6:38:1:0:1:12 1/1:36:14:11:3:15:93.33%:69:1.0315E-7:33:1:0:1:16 0/1:35:11:7:4:13:84.62%:53:4.8074E-6:34:1:0:1:15 0/1:35:17:13:4:21:80.95%:76:2.3502E-8:38:4:0:4:21 0/1:39:11:8:3:13:84.62%:49:1.0096E-5:29:2:0:2:17 0/1:36:10:5:5:14:71.43%:41:7.6278E-5:38:4:1:3:16 0/1:35:18:12:6:21:85.71%:84:3.7603E-9:44:3:0:3:22 0/1:34:11:10:1:13:84.62%:49:1.0096E-5:34:2:0:2:13 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:13:9:4:15:86.67%:60:8.7675E-7:31:2:0:2:15 0/1:36:9:7:2:11:81.82%:39:1.1057E-4:31:2:0:2:14 0/1:35:10:9:1:15:66.67%:40:9.995E-5:34:5:0:5:16 0/1:34:9:8:1:13:69.23%:36:2.2883E-4:32:4:0:4:13 0/1:35:13:7:6:17:76.47%:55:2.5647E-6:39:4:0:4:18 0/1:37:9:7:2:11:81.82%:39:1.1057E-4:34:2:0:2:12 0/1:38:8:4:4:9:88.89%:36:2.0568E-4:34:1:0:1:9 0/1:35:13:11:2:15:86.67%:60:8.7675E-7:30:2:0:2:15 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:7:2:10:90%:42:5.9538E-5:34:1:0:1:10 0/1:36:6:4:2:7:85.71%:26:2.331E-3:60:1:1:0:9 0/1:35:13:12:1:15:86.67%:60:8.7675E-7:32:2:0:2:18 0/1:36:6:4:2:9:66.67%:23:4.5249E-3:29:3:0:3:10 0/1:35:8:5:3:9:88.89%:36:2.0568E-4:38:1:1:0:9 0/1:37:13:9:4:15:86.67%:60:8.7675E-7:30:2:0:2:15 1/1:36:11:7:4:12:91.67%:53:4.8074E-6:38:1:0:1:13 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 0/1:37:17:13:4:20:85%:78:1.2848E-8:29:3:0:3:20 1/1:36:9:7:2:10:90%:42:5.9538E-5:37:1:0:1:12 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:12:9:3:13:92.31%:58:1.3461E-6:31:1:0:1:13 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 0/1:40:8:2:6:9:88.89%:36:2.0568E-4:33:1:0:1:9 0/1:40:12:10:2:15:80%:52:5.2605E-6:30:3:0:3:15 0/1:34:13:6:7:16:81.25%:57:1.6121E-6:32:3:0:3:16 0/1:36:7:3:4:10:70%:28:1.548E-3:40:3:0:3:10 0/1:35:11:8:3:14:78.57%:47:1.6951E-5:39:3:0:3:17 0/1:37:9:5:4:13:69.23%:36:2.2883E-4:35:4:1:3:15 0/1:34:8:6:2:13:61.54%:30:8.238E-4:30:5:0:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:9:6:3:13:69.23%:36:2.2883E-4:31:4:0:4:13 0/1:35:10:8:2:14:71.43%:41:7.6278E-5:35:4:0:4:16 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:7:2:10:90%:42:5.9538E-5:27:1:0:1:10 0/1:36:8:5:3:9:88.89%:36:2.0568E-4:34:1:0:1:9 0/1:37:8:6:2:11:72.73%:32:5.16E-4:33:3:0:3:11 0/1:36:9:7:2:12:75%:37:1.6826E-4:40:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:41:6:4:2:7:85.71%:26:2.331E-3:38:1:0:1:8 1/1:35:11:10:1:12:91.67%:53:4.8074E-6:34:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:36:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:37:12:7:5:13:92.31%:58:1.3461E-6:31:1:0:1:14 0/1:36:16:12:4:18:88.89%:76:2.0936E-8:32:2:0:2:21 0/1:36:8:7:1:10:80%:34:3.5723E-4:30:2:0:2:11 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:11 0/1:36:14:13:1:17:82.35%:63:4.8851E-7:32:3:0:3:17 0/1:35:8:7:1:11:72.73%:32:5.16E-4:29:3:0:3:13 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 0/1:37:9:6:3:15:60%:34:3.4983E-4:30:6:1:5:17 0/1:35:14:12:2:17:82.35%:63:4.8851E-7:31:3:0:3:18 0/1:34:12:9:3:14:85.71%:55:2.9913E-6:34:2:0:2:14 0/1:39:9:7:2:13:69.23%:36:2.2883E-4:29:4:0:4:14 0/1:35:6:4:2:7:85.71%:26:2.331E-3:34:1:0:1:8 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:16:12:4:17:94.12%:81:7.7134E-9:24:1:0:1:20 0/1:36:12:8:4:14:85.71%:55:2.9913E-6:35:2:0:2:17 0/1:35:7:5:2:9:77.78%:29:1.1312E-3:29:2:0:2:11 0/1:37:19:15:4:22:86.36%:89:1.0931E-9:26:3:0:3:24 0/1:36:6:5:1:9:66.67%:23:4.5249E-3:30:3:0:3:10 1/1:34:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:12:10:2:14:85.71%:55:2.9913E-6:28:2:0:2:15 0/1:35:12:8:4:17:70.59%:49:1.1285E-5:31:5:1:4:17 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:12:9:3:13:92.31%:58:1.3461E-6:34:1:1:0:15 0/1:35:8:3:5:10:80%:34:3.5723E-4:27:2:0:2:10 0/1:36:6:5:1:7:85.71%:26:2.331E-3:31:1:0:1:8 0/1:36:15:10:5:20:75%:64:3.8543E-7:33:5:0:5:22 0/1:38:17:11:6:21:80.95%:76:2.3502E-8:32:4:0:4:21 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:35:10:7:3:11:90.91%:47:1.7011E-5:38:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:10:7:3:12:83.33%:44:3.3652E-5:31:2:1:1:14 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:36:13:11:2:14:92.86%:64:3.7391E-7:30:1:0:1:15 0/1:37:8:4:4:9:88.89%:36:2.0568E-4:27:1:0:1:11 0/1:35:6:5:1:7:85.71%:26:2.331E-3:27:1:0:1:7 0/1:34:7:5:2:9:77.78%:29:1.1312E-3:26:2:0:2:11 0/1:36:8:6:2:9:88.89%:36:2.0568E-4:29:1:0:1:9 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 0/1:35:11:9:2:13:84.62%:49:1.0096E-5:32:2:0:2:15 0/1:36:6:4:2:7:85.71%:26:2.331E-3:31:1:0:1:9 1/1:39:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 0/1:35:7:2:5:10:70%:28:1.548E-3:31:3:0:3:10 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:19:10:9:21:90.48%:93:4.7003E-10:34:2:0:2:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:15:13:2:17:88.24%:71:7.3277E-8:28:2:0:2:17 0/1:35:6:4:2:10:60%:22:5.418E-3:33:4:0:4:11 0/1:37:6:6:0:7:85.71%:26:2.331E-3:38:1:0:1:7 1/1:36:11:9:2:12:91.67%:53:4.8074E-6:31:1:0:1:13 1/1:36:11:7:4:12:91.67%:53:4.8074E-6:25:1:0:1:13 0/1:36:13:12:1:17:76.47%:55:2.5647E-6:32:4:0:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 336943 . C A . PASS AC=4;AF=0.015;AN=260;ANN=A|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.2131G>T|p.Ala711Ser|2131/2514|2131/2514|711/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.336943C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.336943C>A||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:21:0%:40:1E0:37:21:15:6:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:15:0%:29:1E0:35:15:10:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:17 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:15 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:11 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:14 0/0:0:0:0:0:9:0%:18:1E0:35:9:7:2:9 0/0:0:0:0:0:21:0%:40:1E0:40:21:16:5:24 0/0:0:0:0:0:12:0%:21:1E0:37:12:5:7:13 0/0:0:0:0:0:12:0%:21:1E0:38:12:9:3:14 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:17:0%:33:1E0:35:17:11:6:19 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:10 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:23 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:45:14:9:5:16 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:20 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:11 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:24 0/0:0:0:0:0:15:0%:29:1E0:36:15:12:3:15 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:35:15:10:5:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:15:7:22 0/0:0:0:0:0:29:0%:55:1E0:36:29:18:11:29 0/0:0:0:0:0:17:0%:33:1E0:36:17:10:7:18 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:15 0/0:0:0:0:0:16:0%:29:1E0:37:16:12:4:17 0/0:0:0:0:0:17:0%:33:1E0:35:17:14:3:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:19 0/0:0:0:0:0:10:0%:17:1E0:35:10:6:4:12 0/0:0:0:0:0:13:0%:25:1E0:34:13:7:6:14 0/0:0:0:0:0:12:0%:21:1E0:38:12:8:4:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:8:4:12 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:9 0/0:0:0:0:0:16:0%:29:1E0:37:16:12:4:16 0/0:0:0:0:0:11:0%:22:1E0:38:11:7:4:11 0/0:0:0:0:0:10:0%:17:1E0:38:10:6:4:11 0/0:0:0:0:0:22:0%:40:1E0:36:22:14:8:22 0/0:0:0:0:0:11:0%:22:1E0:38:11:6:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:35:8:5:3:10 0/0:0:0:0:0:14:0%:25:1E0:39:14:10:4:15 0/0:0:0:0:0:11:0%:22:1E0:43:11:8:3:13 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:11 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:16 0/0:0:0:0:0:13:0%:25:1E0:39:13:9:4:14 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:9 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:29 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:16 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:17 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:19 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:16 0/0:0:0:0:0:10:0%:17:1E0:35:10:3:7:12 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:19 0/0:0:0:0:0:8:0%:14:1E0:40:8:5:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:39:14:9:5:15 0/0:0:0:0:0:13:0%:25:1E0:38:13:7:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:18:0%:32:1E0:37:18:12:6:18 0/0:0:0:0:0:23:0%:44:1E0:35:23:11:12:24 0/0:0:0:0:0:10:0%:17:1E0:41:10:8:2:11 0/0:0:0:0:0:10:0%:17:1E0:34:10:6:4:13 0/0:0:0:0:0:9:0%:18:1E0:42:9:1:8:11 0/0:0:0:0:0:13:0%:25:1E0:37:13:7:6:16 0/0:0:0:0:0:9:0%:18:1E0:36:9:7:2:10 0/0:0:0:0:0:10:0%:17:1E0:38:10:7:3:12 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:12 0/0:0:0:0:0:17:0%:33:1E0:37:17:14:3:17 0/0:0:0:0:0:10:0%:17:1E0:34:10:6:4:10 0/0:0:0:0:0:8:0%:14:1E0:38:8:7:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:16:0%:29:1E0:36:16:10:6:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:41:14:10:4:15 0/0:0:0:0:0:10:0%:17:1E0:41:10:7:3:10 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:17 0/0:0:0:0:0:12:0%:21:1E0:36:12:8:4:12 0/0:0:0:0:0:17:0%:33:1E0:36:17:14:3:18 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:13 0/0:0:0:0:0:26:0%:47:1E0:38:26:18:8:27 0/0:0:0:0:0:8:0%:14:1E0:37:8:4:4:9 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 0/0:0:0:0:0:20:0%:36:1E0:35:20:12:8:22 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:17 0/0:0:0:0:0:9:0%:18:1E0:34:9:3:6:11 0/0:0:0:0:0:8:0%:14:1E0:36:8:7:1:8 0/0:0:0:0:0:22:0%:40:1E0:38:22:15:7:24 0/0:0:0:0:0:16:0%:29:1E0:37:16:11:5:17 0/0:0:0:0:0:15:0%:29:1E0:34:15:7:8:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:16:0%:29:1E0:39:16:12:4:16 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:14 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:11 0/0:0:0:0:0:19:0%:37:1E0:37:19:13:6:19 0/0:0:0:0:0:26:0%:47:1E0:36:26:16:10:29 0/0:0:0:0:0:17:0%:33:1E0:39:17:12:5:17 0/0:0:0:0:0:25:0%:48:1E0:37:25:21:4:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:19:0%:37:1E0:37:19:12:7:19 0/0:0:0:0:0:14:0%:25:1E0:36:14:11:3:14 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:18 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:11 0/0:0:0:0:0:12:0%:21:1E0:39:12:6:6:12 0/0:0:0:0:0:20:0%:36:1E0:38:20:13:7:23 0/0:0:0:0:0:17:0%:33:1E0:38:17:13:4:18 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:10 0/0:0:0:0:0:20:0%:36:1E0:34:20:11:9:21 0/0:0:0:0:0:8:0%:14:1E0:35:8:5:3:8 0/0:0:0:0:0:10:0%:17:1E0:35:10:8:2:11 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:9 0/0:0:0:0:0:15:0%:29:1E0:39:15:9:6:16 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:15 0/0:0:0:0:0:11:0%:22:1E0:39:11:9:2:14 0/0:0:0:0:0:14:0%:25:1E0:36:14:7:7:14 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:11 0/0:0:0:0:0:17:0%:33:1E0:34:17:10:7:17 0/0:0:0:0:0:8:0%:14:1E0:38:8:4:4:8 0/0:0:0:0:0:8:0%:14:1E0:33:8:4:4:9 0/0:0:0:0:0:15:0%:29:1E0:37:15:10:5:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:15 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:11 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:11 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:17 0/0:0:0:0:0:13:0%:25:1E0:35:13:7:6:13 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:15 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 338618 . C G . PASS AC=196;AF=1.00;AN=196;ANN=G|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.456G>C|p.Gly152Gly|456/2514|456/2514|152/837||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338618C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338618C>G||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:10:8:2:11:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:33:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:33:12:9:3:12:100%:64:3.698E-7:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:43:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:32:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:32:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:34:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:31:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:15 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 338669 . T C . PASS AC=1;AF=5.000e-03;AN=200;ANN=C|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.405A>G|p.Leu135Leu|405/2514|405/2514|135/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338669T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338669T>C||||||;HOM=0;set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anc 338682 . T G . PASS AC=1;AF=5.208e-03;AN=192;ANN=G|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.392A>C|p.Asp131Ala|392/2514|392/2514|131/837||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338682T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338682T>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:38:2:2:0:10:20%:7:2.3684E-1:36:8:7:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:2:1:1:9:22.22%:7:2.3529E-1:37:7:4:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:0:1:9:11.11%:11:5E-1:33:8:5:3:11 0/0:36:3:1:2:10:30%:4:1.0526E-1:34:7:5:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:2:1:1:12:16.67%:10:2.3913E-1:34:10:5:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:35:9:7:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:5:3:2:22:22.73%:12:2.4248E-2:35:17:12:5:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:34:10:5:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:11:0%:22:1E0:37:11:9:2:15 0/0:35:2:1:1:9:22.22%:7:2.3529E-1:37:7:6:1:11 0/0:38:1:1:0:14:7.14%:17:5E-1:36:13:7:6:17 0/0:38:1:0:1:11:9.09%:14:5E-1:36:10:4:6:14 0/0:30:1:1:0:8:12.5%:8:5E-1:41:7:4:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:1:2:13:23.08%:9:1.1E-1:36:10:7:3:16 0/0:35:1:0:1:13:7.69%:18:5E-1:39:12:9:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:3:2:1:10:30%:4:1.0526E-1:32:7:5:2:12 0/0:37:4:2:2:16:25%:8:5.0612E-2:35:12:7:5:16 0/0:38:5:1:4:21:23.81%:12:2.3921E-2:36:16:10:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:1:0:12:8.33%:14:5E-1:36:11:8:3:14 0/0:38:1:1:0:14:7.14%:17:5E-1:37:13:8:5:18 0/0:38:2:0:2:10:20%:7:2.3684E-1:36:8:6:2:14 0/0:32:1:1:0:11:9.09%:14:5E-1:41:10:6:4:14 0/0:38:1:0:1:10:10%:11:5E-1:36:9:3:6:11 0/0:38:1:1:0:9:11.11%:11:5E-1:34:8:6:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:36:3:2:1:22:13.64%:19:1.1628E-1:35:19:10:9:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:8 0/0:38:1:0:1:13:7.69%:18:5E-1:40:12:7:5:13 0/0:38:3:2:1:16:18.75%:11:1.129E-1:36:13:10:3:22 0/0:38:4:1:3:14:28.57%:6:4.8889E-2:38:10:6:4:17 0/0:37:2:0:2:16:12.5%:15:2.4194E-1:34:14:9:5:20 0/0:38:1:0:1:9:11.11%:11:5E-1:31:8:6:2:10 0/0:38:2:1:1:13:15.38%:13:2.4E-1:41:11:8:3:15 0/0:36:4:1:3:12:33.33%:4:4.6584E-2:36:8:7:1:13 0/0:38:2:2:0:12:16.67%:10:2.3913E-1:33:10:6:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:4:2:2:13:30.77%:6:4.7826E-2:41:9:6:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:0:4:11:36.36%:4:4.5113E-2:35:7:5:2:13 0/0:37:1:0:1:7:14.29%:8:5E-1:36:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:2:0:2:9:22.22%:7:2.3529E-1:36:7:3:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:3:2:1:14:21.43%:9:1.1111E-1:35:11:8:3:17 0/0:38:1:0:1:11:9.09%:14:5E-1:37:10:7:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:38:1:1:0:8:12.5%:8:5E-1:35:7:4:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:2:1:1:12:16.67%:10:2.3913E-1:34:10:5:5:15 0/0:38:1:1:0:11:9.09%:14:5E-1:34:10:9:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:4:2:2:22:18.18%:15:5.3885E-2:32:18:12:6:23 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:13 0/0:0:0:0:0:7:0%:14:1E0:40:7:2:5:8 0/0:38:2:1:1:11:18.18%:10:2.381E-1:34:9:5:4:17 0/0:38:2:1:1:10:20%:7:2.3684E-1:33:8:6:2:12 0/0:34:1:0:1:15:6.67%:21:5E-1:37:14:10:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:7:0%:14:1E0:34:7:3:4:7 0/0:36:5:3:2:11:45.45%:3:1.7544E-2:35:6:6:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:2:1:1:18:11.11%:18:2.4286E-1:34:16:6:10:22 0/0:38:2:1:1:9:22.22%:7:2.3529E-1:37:7:3:4:9 0/0:38:1:0:1:9:11.11%:11:5E-1:40:8:4:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:34:1:0:1:7:14.29%:8:5E-1:34:6:5:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:38:1:1:0:11:9.09%:14:5E-1:32:10:4:6:12 0/0:37:1:1:0:7:14.29%:8:5E-1:38:6:5:1:10 0/0:0:0:0:0:13:0%:25:1E0:34:13:7:6:18 0/0:37:6:1:5:20:30%:7:1.0098E-2:41:14:7:7:24 0/0:0:0:0:0:9:0%:18:1E0:32:9:6:3:12 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:38:5:2:3:17:29.41%:8:2.2239E-2:36:12:5:7:21 0/1:38:6:2:4:18:33.33%:20:9.5308E-3:36:12:9:3:20 0/0:38:3:0:3:17:17.65%:14:1.1364E-1:38:14:8:6:18 0/0:38:1:1:0:19:5.26%:28:5E-1:36:18:11:7:24 0/0:38:2:1:1:20:10%:21:2.4359E-1:39:18:9:9:26 0/0:38:1:1:0:20:5%:27:5E-1:36:19:16:3:23 0/0:30:1:0:1:9:11.11%:11:5E-1:35:8:4:4:13 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:36:15:11:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:2:2:0:10:20%:7:2.3684E-1:37:8:5:3:13 0/0:0:0:0:0:13:0%:25:1E0:34:13:8:5:17 0/0:36:5:2:3:18:27.78%:8:2.2727E-2:34:13:8:5:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:4:1:3:19:21.05%:13:5.251E-2:42:15:8:7:24 0/0:38:2:0:2:15:13.33%:16:2.4138E-1:35:13:7:6:21 0/0:33:2:1:1:10:20%:7:2.3684E-1:34:8:8:0:16 0/0:33:1:0:1:16:6.25%:21:5E-1:34:15:9:6:18 0/0:35:2:1:1:13:15.38%:13:2.4E-1:33:11:8:3:14 0/0:36:3:0:3:13:23.08%:9:1.1E-1:35:10:6:4:14 0/0:0:0:0:0:11:0%:22:1E0:34:11:11:0:17 0/0:38:2:2:0:15:13.33%:16:2.4138E-1:34:13:9:4:17 0/0:0:0:0:0:10:0%:17:1E0:35:10:7:3:15 0/0:38:1:1:0:9:11.11%:11:5E-1:36:8:5:3:13 0/0:38:1:0:1:8:12.5%:8:5E-1:33:7:6:1:9 0/0:36:3:1:2:14:21.43%:9:1.1111E-1:35:11:7:4:17 0/0:29:1:0:1:10:10%:11:5E-1:35:9:9:0:10 0/0:38:1:1:0:12:8.33%:14:5E-1:37:11:9:2:13 0/0:36:2:0:2:13:15.38%:13:2.4E-1:33:11:10:1:15 0/0:33:2:0:2:8:25%:5:2.3333E-1:35:6:4:2:9 0/0:38:1:0:1:7:14.29%:8:5E-1:35:6:3:3:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:38:2:0:2:9:22.22%:7:2.3529E-1:38:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:33:10:8:2:11 0/0:0:0:0:0:7:0%:14:1E0:41:7:3:4:9 0/0:38:2:1:1:13:15.38%:13:2.4E-1:38:11:6:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 338690 . A G . PASS AC=2;AF=8.621e-03;AN=232;ANN=G|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.384T>C|p.Asn128Asn|384/2514|384/2514|128/837||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338690A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338690A>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:16:0%:29:1E0:45:16:3:13:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:3:2:1:14:21.43%:9:1.1111E-1:42:11:7:4:14 0/0:0:0:0:0:7:0%:14:1E0:47:7:2:5:7 0/0:38:2:1:1:13:15.38%:13:2.4E-1:38:11:3:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:38:1:0:1:10:10%:11:5E-1:41:9:3:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:2:2:0:8:25%:5:2.3333E-1:39:6:3:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:3:1:2:21:14.29%:19:1.1585E-1:38:18:6:12:21 0/0:38:1:0:1:7:14.29%:8:5E-1:43:6:3:3:7 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:43:15:5:10:17 0/0:38:1:0:1:10:10%:11:5E-1:38:9:2:7:10 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:1:1:0:7:14.29%:8:5E-1:39:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:0:1:7:14.29%:8:5E-1:37:6:1:5:7 0/0:0:0:0:0:9:0%:18:1E0:41:9:5:4:10 0/0:37:6:3:3:27:22.22%:16:1.1461E-2:42:21:13:8:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:14 0/0:0:0:0:0:8:0%:14:1E0:38:8:4:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:12:0%:21:1E0:39:12:7:5:13 0/0:38:2:1:1:12:16.67%:10:2.381E-1:43:9:6:3:13 0/0:29:1:1:0:19:5.26%:24:5E-1:40:17:9:8:19 0/0:38:1:0:1:14:7.14%:17:5E-1:42:13:4:9:14 0/0:38:1:1:0:11:9.09%:14:5E-1:40:10:4:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:2:1:1:8:25%:5:2.3333E-1:40:6:4:2:8 0/0:38:3:1:2:16:18.75%:11:1.129E-1:41:13:7:6:17 0/0:38:1:0:1:17:5.88%:24:5E-1:44:16:10:6:17 0/0:38:4:3:1:11:36.36%:4:4.5113E-2:38:7:6:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:3:2:1:11:27.27%:7:1.0714E-1:35:8:4:4:12 0/0:37:5:2:3:19:26.32%:10:2.3166E-2:39:14:5:9:20 0/0:38:5:1:4:23:21.74%:14:2.4548E-2:42:18:9:9:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:1:0:13:7.69%:18:5E-1:41:12:8:4:13 0/0:38:1:1:0:19:5.26%:28:5E-1:39:18:7:11:19 0/0:37:2:0:2:13:15.38%:13:2.4E-1:40:11:5:6:15 0/0:37:1:1:0:17:5.88%:24:5E-1:42:16:6:10:17 0/0:38:1:0:1:8:12.5%:8:5E-1:45:7:2:5:9 0/0:38:1:1:0:14:7.14%:17:5E-1:36:13:7:6:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:2:1:26:11.54%:25:1.1765E-1:43:23:9:14:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:49:10:2:8:10 0/0:38:1:0:1:12:8.33%:14:5E-1:47:11:7:4:12 0/0:38:3:2:1:25:12%:25:1.1735E-1:41:22:10:12:25 0/0:37:5:2:3:16:31.25%:6:2.1691E-2:40:11:6:5:17 0/0:38:2:0:2:23:8.7%:28:2.4444E-1:38:21:9:12:25 0/0:38:1:0:1:9:11.11%:11:5E-1:44:8:6:2:9 0/0:38:2:1:1:14:14.29%:12:2.4074E-1:45:12:6:6:16 0/0:37:4:1:3:16:25%:8:5.0612E-2:39:12:6:6:17 0/0:38:2:2:0:18:11.11%:18:2.4286E-1:40:16:7:9:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:4:2:2:15:26.67%:8:4.9808E-2:47:11:6:5:16 0/0:38:1:1:0:12:8.33%:14:5E-1:41:11:3:8:12 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:36:10:5:5:14 0/0:38:1:0:1:9:11.11%:11:5E-1:43:8:4:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:0:2:10:20%:7:2.3684E-1:35:8:3:5:10 0/0:38:1:1:0:8:12.5%:8:5E-1:38:7:3:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:38:3:2:1:17:17.65%:14:1.1364E-1:42:14:7:7:17 0/0:38:1:0:1:16:6.25%:21:5E-1:40:15:7:8:16 0/0:0:0:0:0:8:0%:14:1E0:35:8:4:4:8 0/0:36:2:2:0:15:13.33%:16:2.4138E-1:37:13:3:10:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:2:1:1:13:15.38%:13:2.4E-1:43:11:4:7:13 0/0:38:1:1:0:14:7.14%:17:5E-1:41:13:8:5:15 0/0:38:1:0:1:11:9.09%:14:5E-1:41:10:4:6:12 0/0:38:4:2:2:21:19.05%:15:5.3471E-2:45:17:10:7:22 0/0:0:0:0:0:11:0%:22:1E0:39:11:4:7:11 0/0:0:0:0:0:9:0%:18:1E0:43:9:3:6:9 0/0:38:2:1:1:12:16.67%:10:2.3913E-1:45:10:4:6:14 0/0:38:2:1:1:12:16.67%:10:2.3913E-1:39:10:6:4:12 0/0:36:2:0:2:18:11.11%:18:2.4286E-1:43:16:9:7:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:9 0/0:38:5:3:2:12:41.67%:3:1.8634E-2:40:7:5:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:38:2:1:1:19:10.53%:21:2.4324E-1:39:17:6:11:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:2:1:1:9:22.22%:7:2.3529E-1:46:7:3:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:34:1:0:1:11:9.09%:14:5E-1:41:10:3:7:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:38:1:1:0:12:8.33%:14:5E-1:38:11:5:6:12 0/0:37:1:1:0:10:10%:11:5E-1:36:9:6:3:10 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/1:37:7:1:6:26:26.92%:23:4.9169E-3:41:19:7:12:27 0/0:0:0:0:0:13:0%:25:1E0:40:13:4:9:14 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:20 0/0:34:1:0:1:11:9.09%:14:5E-1:45:10:3:7:11 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:36:6:4:2:9 0/0:38:5:2:3:22:22.73%:12:2.4248E-2:43:17:4:13:22 0/1:37:7:2:5:23:30.43%:23:4.5803E-3:41:16:10:6:23 0/0:38:3:0:3:19:15.79%:17:1.1486E-1:40:16:7:9:20 0/0:38:1:1:0:28:3.57%:41:5E-1:40:27:12:15:28 0/0:38:2:1:1:23:8.7%:24:2.4419E-1:42:20:8:12:24 0/0:37:1:1:0:20:5%:27:5E-1:45:19:10:9:25 0/0:38:1:0:1:12:8.33%:14:5E-1:41:11:4:7:14 0/0:38:2:1:1:18:11.11%:18:2.4286E-1:42:16:11:5:18 0/0:0:0:0:0:11:0%:22:1E0:38:11:0:11:12 0/0:36:3:3:0:17:17.65%:14:1.1364E-1:38:14:5:9:17 0/0:33:1:1:0:19:5.26%:28:5E-1:37:18:6:12:20 0/0:38:5:2:3:18:27.78%:8:2.2727E-2:47:13:7:6:19 0/0:38:2:2:0:10:20%:7:2.3684E-1:38:8:3:5:10 0/0:38:1:0:1:11:9.09%:14:5E-1:39:10:4:6:11 0/0:36:4:1:3:26:15.38%:20:5.5222E-2:44:22:7:15:26 0/0:38:2:0:2:21:9.52%:25:2.439E-1:40:19:6:13:22 0/0:36:2:1:1:19:10.53%:21:2.4324E-1:44:17:11:6:19 0/0:38:1:0:1:17:5.88%:24:5E-1:39:16:8:8:18 0/0:32:2:1:1:14:14.29%:12:2.4074E-1:42:12:8:4:14 0/0:37:3:0:3:16:18.75%:11:1.129E-1:37:13:6:7:16 0/0:0:0:0:0:16:0%:29:1E0:35:16:12:4:17 0/0:38:2:2:0:22:9.09%:24:2.4419E-1:42:20:9:11:22 0/0:0:0:0:0:19:0%:37:1E0:37:19:12:7:19 0/0:38:1:1:0:15:6.67%:21:5E-1:41:14:8:6:15 0/0:38:1:0:1:9:11.11%:11:5E-1:34:8:5:3:9 0/0:38:3:1:2:16:18.75%:11:1.129E-1:43:13:6:7:16 0/0:33:1:1:0:12:8.33%:14:5E-1:40:11:9:2:12 0/0:38:1:1:0:16:6.25%:21:5E-1:36:15:9:6:17 0/0:38:2:0:2:17:11.76%:18:2.4242E-1:34:15:10:5:18 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:35:7:4:3:9 0/0:38:1:0:1:8:12.5%:8:5E-1:36:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:11:0%:22:1E0:41:11:5:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:2:0:2:9:22.22%:7:2.3529E-1:38:7:3:4:10 0/0:38:2:0:2:9:22.22%:7:2.3529E-1:40:7:5:2:9 0/0:38:1:0:1:10:10%:11:5E-1:45:9:4:5:11 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:12 0/0:0:0:0:0:10:0%:17:1E0:43:10:3:7:10 0/0:38:2:1:1:13:15.38%:13:2.4E-1:40:11:6:5:13 0/0:38:3:1:2:9:33.33%:4:1.0294E-1:39:6:4:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 338692 . T C . PASS AC=2;AF=8.475e-03;AN=236;ANN=C|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.382A>G|p.Asn128Asp|382/2514|382/2514|128/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338692T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338692T>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:18:0%:32:1E0:44:18:5:13:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:3:2:1:14:21.43%:9:1.1111E-1:43:11:7:4:14 0/0:0:0:0:0:7:0%:14:1E0:49:7:2:5:7 0/0:38:2:1:1:13:15.38%:13:2.4E-1:38:11:3:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:38:1:0:1:11:9.09%:14:5E-1:42:10:4:6:11 0/0:0:0:0:0:9:0%:18:1E0:40:9:6:3:9 0/0:38:2:2:0:8:25%:5:2.3333E-1:36:6:3:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:2:2:21:19.05%:15:5.3471E-2:40:17:5:12:21 0/0:38:1:0:1:7:14.29%:8:5E-1:43:6:3:3:7 0/0:37:2:1:1:16:12.5%:15:2.4194E-1:45:14:4:10:17 0/0:38:1:0:1:10:10%:11:5E-1:39:9:2:7:10 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:1:1:0:7:14.29%:8:5E-1:39:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:0:1:7:14.29%:8:5E-1:38:6:1:5:7 0/0:0:0:0:0:11:0%:22:1E0:41:11:5:6:11 0/0:37:5:3:2:27:18.52%:19:2.5527E-2:42:22:14:8:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:14:0%:25:1E0:37:14:4:10:14 0/0:0:0:0:0:8:0%:14:1E0:40:8:4:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:13:0%:25:1E0:40:13:8:5:13 0/0:38:2:1:1:11:18.18%:10:2.381E-1:45:9:5:4:13 0/0:36:2:2:0:19:10.53%:21:2.4324E-1:42:17:9:8:19 0/0:38:1:0:1:14:7.14%:17:5E-1:42:13:4:9:14 0/0:38:1:1:0:13:7.69%:18:5E-1:39:12:6:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:2:1:1:8:25%:5:2.3333E-1:41:6:4:2:8 0/0:38:3:1:2:17:17.65%:14:1.1364E-1:42:14:7:7:17 0/0:38:1:0:1:16:6.25%:21:5E-1:46:15:9:6:17 0/0:38:4:3:1:11:36.36%:4:4.5113E-2:38:7:6:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:3:2:1:12:25%:6:1.087E-1:39:9:5:4:12 0/0:35:5:2:3:19:26.32%:10:2.3166E-2:39:14:5:9:20 0/0:38:5:1:4:23:21.74%:14:2.4548E-2:43:18:9:9:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:1:0:12:8.33%:14:5E-1:45:11:7:4:12 0/0:34:3:2:1:20:15%:16:1.1538E-1:41:17:7:10:21 0/0:35:3:1:2:16:18.75%:11:1.129E-1:40:13:7:6:16 0/0:38:1:1:0:17:5.88%:24:5E-1:42:16:6:10:17 0/0:38:1:0:1:9:11.11%:11:5E-1:45:8:3:5:9 0/0:38:1:1:0:14:7.14%:17:5E-1:38:13:6:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:3:2:1:26:11.54%:25:1.1765E-1:42:23:10:13:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:51:9:2:7:10 0/0:35:2:0:2:13:15.38%:13:2.4E-1:44:11:7:4:13 0/0:38:3:2:1:25:12%:25:1.1735E-1:42:22:10:12:25 0/0:37:5:2:3:16:31.25%:6:2.1691E-2:42:11:5:6:17 0/0:38:2:0:2:25:8%:31:2.449E-1:37:23:10:13:25 0/0:38:1:0:1:8:12.5%:8:5E-1:47:7:5:2:9 0/0:36:3:2:1:16:18.75%:11:1.129E-1:43:13:7:6:16 0/0:38:4:1:3:16:25%:8:5.0612E-2:40:12:6:6:17 0/0:38:2:2:0:18:11.11%:18:2.4286E-1:40:16:7:9:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:4:2:2:16:25%:8:5.0612E-2:47:12:7:5:16 0/0:34:3:1:2:14:21.43%:9:1.1111E-1:41:11:3:8:14 0/0:38:4:0:4:14:28.57%:6:4.8889E-2:37:10:5:5:14 0/0:38:1:0:1:9:11.11%:11:5E-1:43:8:4:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:0:2:10:20%:7:2.3684E-1:38:8:3:5:10 0/0:35:2:1:1:9:22.22%:7:2.3529E-1:40:7:3:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:38:3:2:1:17:17.65%:14:1.1364E-1:41:14:7:7:17 0/0:38:1:0:1:15:6.67%:21:5E-1:42:14:6:8:16 0/0:0:0:0:0:7:0%:14:1E0:37:7:3:4:8 0/0:36:2:2:0:15:13.33%:16:2.4138E-1:37:13:3:10:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:2:1:1:12:16.67%:10:2.3913E-1:45:10:4:6:13 0/0:38:1:1:0:15:6.67%:21:5E-1:41:14:9:5:15 0/0:38:1:0:1:12:8.33%:14:5E-1:41:11:5:6:12 0/0:38:4:2:2:22:18.18%:15:5.3885E-2:46:18:11:7:22 0/0:0:0:0:0:11:0%:22:1E0:39:11:4:7:11 0/0:0:0:0:0:9:0%:18:1E0:44:9:3:6:9 0/0:38:2:1:1:15:13.33%:16:2.4138E-1:42:13:7:6:15 0/0:38:2:1:1:12:16.67%:10:2.3913E-1:38:10:6:4:12 0/0:36:2:0:2:18:11.11%:18:2.4286E-1:44:16:9:7:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:9:0%:18:1E0:41:9:4:5:9 0/0:37:5:3:2:13:38.46%:4:1.9565E-2:38:8:6:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:39:15:4:11:19 0/0:38:2:1:1:9:22.22%:7:2.3529E-1:40:7:3:4:9 0/0:35:2:1:1:10:20%:7:2.3684E-1:44:8:4:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:1:0:1:12:8.33%:14:5E-1:40:11:4:7:12 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:37:6:5:1:9 0/0:38:1:1:0:11:9.09%:14:5E-1:39:10:5:5:11 0/0:37:1:1:0:10:10%:11:5E-1:39:9:6:3:10 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:18 0/1:37:7:1:6:27:25.93%:22:5.0143E-3:42:20:8:12:27 0/0:0:0:0:0:14:0%:25:1E0:39:14:4:10:15 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:30:1:0:1:11:9.09%:14:5E-1:43:10:3:7:11 0/0:35:5:0:5:11:45.45%:3:1.7544E-2:41:6:4:2:11 0/0:38:5:2:3:21:23.81%:12:2.3921E-2:44:16:4:12:21 0/1:37:7:2:5:23:30.43%:23:4.5803E-3:41:16:10:6:23 0/0:38:3:0:3:20:15%:16:1.1538E-1:43:17:8:9:20 0/0:35:1:1:0:27:3.7%:41:5E-1:42:26:11:15:28 0/0:38:2:1:1:25:8%:31:2.449E-1:43:23:9:14:25 0/0:38:1:1:0:23:4.35%:34:5E-1:43:22:13:9:23 0/0:36:1:0:1:12:8.33%:14:5E-1:41:11:4:7:12 0/0:38:2:1:1:18:11.11%:18:2.4286E-1:42:16:11:5:18 0/0:0:0:0:0:13:0%:25:1E0:37:13:1:12:13 0/0:36:3:3:0:16:18.75%:11:1.129E-1:40:13:4:9:16 0/0:33:1:1:0:19:5.26%:28:5E-1:37:18:6:12:19 0/0:37:5:2:3:18:27.78%:8:2.2727E-2:47:13:7:6:18 0/0:38:2:2:0:8:25%:5:2.3333E-1:43:6:3:3:9 0/0:38:1:0:1:10:10%:11:5E-1:39:9:3:6:11 0/0:37:4:1:3:25:16%:21:5.4928E-2:43:21:6:15:25 0/0:38:2:0:2:22:9.09%:24:2.4419E-1:41:20:7:13:22 0/0:38:2:1:1:19:10.53%:21:2.4324E-1:44:17:11:6:19 0/0:38:1:0:1:18:5.56%:24:5E-1:40:17:8:9:18 0/0:35:2:1:1:13:15.38%:13:2.4E-1:45:11:8:3:13 0/0:37:3:0:3:15:20%:11:1.1207E-1:41:12:5:7:16 0/0:0:0:0:0:16:0%:29:1E0:36:16:12:4:17 0/0:36:2:2:0:22:9.09%:24:2.4419E-1:41:20:9:11:22 0/0:34:1:1:0:19:5.26%:28:5E-1:39:18:11:7:19 0/0:36:2:2:0:15:13.33%:16:2.4138E-1:41:13:7:6:16 0/0:38:1:0:1:8:12.5%:8:5E-1:37:7:4:3:9 0/0:34:4:2:2:17:23.53%:11:5.132E-2:41:13:6:7:17 0/0:32:2:1:1:13:15.38%:13:2.4E-1:42:11:9:2:13 0/0:38:1:1:0:17:5.88%:24:5E-1:37:16:10:6:17 0/0:38:2:0:2:16:12.5%:15:2.4194E-1:36:14:9:5:16 0/0:36:3:1:2:10:30%:4:1.0526E-1:41:7:4:3:10 0/0:38:1:0:1:8:12.5%:8:5E-1:34:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:0:0:0:0:11:0%:22:1E0:41:11:5:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:3:1:2:11:27.27%:7:1.0714E-1:38:8:4:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:38:1:0:1:11:9.09%:14:5E-1:43:10:4:6:11 0/0:0:0:0:0:11:0%:22:1E0:39:11:7:4:12 0/0:0:0:0:0:10:0%:17:1E0:45:10:3:7:10 0/0:38:2:1:1:14:14.29%:12:2.4074E-1:40:12:7:5:14 0/0:37:4:2:2:10:40%:3:4.3344E-2:40:6:4:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 338699 . G A . PASS AC=1;AF=3.817e-03;AN=262;ANN=A|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.375C>T|p.Thr125Thr|375/2514|375/2514|125/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338699G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338699G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:7:0%:14:1E0:49:7:2:5:7 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:10 0/0:0:0:0:0:12:0%:21:1E0:39:12:5:7:12 0/0:0:0:0:0:8:0%:14:1E0:39:8:5:3:8 0/0:0:0:0:0:11:0%:22:1E0:36:11:6:5:11 0/0:0:0:0:0:7:0%:14:1E0:43:7:3:4:7 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:23 0/0:0:0:0:0:7:0%:14:1E0:40:7:3:4:7 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:18 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:11 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:37:7:5:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:8 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:10 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:14 0/0:0:0:0:0:8:0%:14:1E0:37:8:4:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:13:0%:25:1E0:41:13:8:5:13 0/0:0:0:0:0:11:0%:22:1E0:43:11:5:6:12 0/0:34:1:1:0:20:5%:27:5E-1:41:19:11:8:21 0/0:0:0:0:0:15:0%:29:1E0:41:15:5:10:15 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:10 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:18 0/0:0:0:0:0:14:0%:25:1E0:38:14:10:4:14 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:13 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:16 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:23 0/0:38:1:0:1:24:4.17%:34:5E-1:40:23:10:13:24 0/0:0:0:0:0:7:0%:14:1E0:40:7:6:1:7 0/1:43:10:6:4:13:76.92%:42:5.3843E-5:38:3:2:1:14 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:25 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:18 0/0:0:0:0:0:12:0%:21:1E0:42:12:6:6:12 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:14 0/0:0:0:0:0:9:0%:18:1E0:39:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:47:13:4:9:13 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:16 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:22 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:28 0/0:0:0:0:0:9:0%:18:1E0:44:9:6:3:9 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:16 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:19 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:39:8:4:4:8 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:14 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:16 0/0:0:0:0:0:10:0%:17:1E0:41:10:4:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:35:10:3:7:10 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:9 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:8 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:15 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:19 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:8 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:16 0/0:0:0:0:0:15:0%:29:1E0:40:15:10:5:16 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:14 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:13 0/0:0:0:0:0:10:0%:17:1E0:42:10:4:6:10 0/0:0:0:0:0:14:0%:25:1E0:41:14:7:7:15 0/0:0:0:0:0:12:0%:21:1E0:37:12:7:5:12 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:12:0%:21:1E0:41:12:5:7:12 0/0:0:0:0:0:12:0%:21:1E0:39:12:8:4:12 0/0:0:0:0:0:8:0%:14:1E0:40:8:2:6:8 ./. 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:0:0:0:0:12:0%:21:1E0:42:12:7:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:13:0%:25:1E0:40:13:4:9:13 0/0:0:0:0:0:14:0%:25:1E0:35:14:13:1:14 0/0:0:0:0:0:11:0%:22:1E0:39:11:5:6:11 0/0:0:0:0:0:12:0%:21:1E0:38:12:7:5:13 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:16:0%:29:1E0:39:16:5:11:16 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:20 0/0:0:0:0:0:13:0%:25:1E0:42:13:3:10:13 0/0:0:0:0:0:11:0%:22:1E0:38:11:4:7:13 0/0:0:0:0:0:19:0%:37:1E0:43:19:5:14:19 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:39:1:0:1:20:5%:27:5E-1:42:19:7:12:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:11:0%:22:1E0:41:11:4:7:12 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:1:12:13 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:18 0/0:0:0:0:0:20:0%:36:1E0:36:20:7:13:20 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:9:0%:18:1E0:41:9:5:4:9 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 0/0:0:0:0:0:15:0%:29:1E0:41:15:11:4:15 0/0:0:0:0:0:14:0%:25:1E0:38:14:4:10:15 0/0:0:0:0:0:16:0%:29:1E0:34:16:11:5:17 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:20 0/0:0:0:0:0:17:0%:33:1E0:40:17:11:6:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:19 0/0:0:0:0:0:14:0%:25:1E0:40:14:10:4:14 0/0:0:0:0:0:19:0%:37:1E0:36:19:12:7:19 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:17 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:12 0/0:38:1:0:1:10:10%:11:5E-1:34:9:5:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:11 0/0:0:0:0:0:13:0%:25:1E0:39:13:6:7:13 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:7 0/0:0:0:0:0:12:0%:21:1E0:37:12:7:5:13 0/0:0:0:0:0:9:0%:18:1E0:39:9:5:4:9 0/0:0:0:0:0:11:0%:22:1E0:43:11:4:7:11 0/0:0:0:0:0:10:0%:17:1E0:38:10:6:4:11 0/0:0:0:0:0:10:0%:17:1E0:43:10:3:7:10 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:16 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 338719 . T C . PASS AC=264;AF=1.00;AN=264;ANN=C|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.355A>G|p.Thr119Ala|355/2514|355/2514|119/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338719T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338719T>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:16:6:10:17:94.12%:81:7.7134E-9:34:1:0:1:17 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:12:4:8:13:92.31%:64:3.698E-7:0:0:0:0:14 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:15:6:9:16:93.75%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:18:10:8:19:94.74%:92:5.6585E-10:38:1:0:1:20 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 338734 . G A . PASS AC=40;AF=0.153;AN=262;ANN=A|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.340C>T|p.Leu114Leu|340/2514|340/2514|114/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338734G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338734G>A||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:15:4:11:18:83.33%:68:1.4655E-7:45:3:2:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:14 0/0:0:0:0:0:7:0%:14:1E0:43:7:3:4:7 0/1:37:7:4:3:17:41.18%:24:3.6151E-3:37:10:6:4:17 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:12 0/1:36:6:3:3:9:66.67%:23:4.5249E-3:35:3:2:1:9 0/1:36:9:4:5:13:69.23%:36:2.2883E-4:43:4:3:1:13 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:8 0/1:39:19:6:13:28:67.86%:77:1.6265E-8:37:9:6:3:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:16:5:11:21:76.19%:69:1.2221E-7:38:5:2:3:21 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:15 0/0:35:2:0:2:19:10.53%:21:2.4324E-1:39:17:9:8:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:10 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:15 0/1:39:21:14:7:30:70%:87:1.7919E-9:42:9:4:5:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:40:10:5:5:15:66.67%:40:9.995E-5:47:5:4:1:15 1/1:37:11:4:7:12:91.67%:53:4.8074E-6:34:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:43:9:6:3:10 0/1:40:8:4:4:15:53.33%:29:1.0995E-3:38:7:3:4:17 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:23 0/1:39:10:5:5:14:71.43%:41:7.6278E-5:34:4:1:3:14 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:22 0/0:0:0:0:0:10:0%:17:1E0:41:10:3:7:10 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:36:6:3:3:9 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:12 0/1:40:14:6:8:22:63.64%:55:2.7817E-6:39:8:5:3:22 0/1:37:14:8:6:20:70%:57:1.6702E-6:37:6:2:4:20 0/1:39:10:7:3:22:45.45%:35:2.6061E-4:41:12:5:7:22 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/1:39:11:5:6:22:50%:40:9.1981E-5:44:11:7:4:22 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/1:41:9:3:6:17:52.94%:33:4.6348E-4:46:8:3:5:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:12:7:5:16:75%:50:8.0605E-6:37:4:2:2:16 0/0:37:1:1:0:25:4%:38:5E-1:40:24:11:13:25 0/1:35:9:3:6:15:60%:34:3.4983E-4:44:6:2:4:15 0/0:0:0:0:0:14:0%:25:1E0:43:14:5:9:14 0/1:39:9:2:7:17:52.94%:33:4.6348E-4:40:8:7:1:17 0/1:39:13:4:9:18:72.22%:54:3.7078E-6:36:5:4:1:18 0/1:40:7:2:5:20:35%:23:4.158E-3:38:13:7:6:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:1:1:0:31:3.23%:48:5E-1:39:30:11:19:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:5:1:4:11:45.45%:3:1.7544E-2:38:6:3:3:11 0/1:41:13:4:9:19:68.42%:53:5.0106E-6:38:6:2:4:19 0/1:42:10:6:4:21:47.62%:36:2.3971E-4:37:11:5:6:21 0/1:39:18:9:9:26:69.23%:74:3.6611E-8:38:8:5:3:26 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/1:38:19:7:12:30:63.33%:75:2.6715E-8:41:11:7:4:30 0/1:41:12:6:6:16:75%:50:8.0605E-6:36:4:2:2:16 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:19 0/1:38:11:4:7:22:50%:40:9.1981E-5:39:11:5:6:22 0/1:39:17:6:11:23:73.91%:72:5.7694E-8:36:6:4:2:24 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:11 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:37:1:1:0:17:5.88%:24:5E-1:37:16:4:12:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:19 0/1:39:10:6:4:13:76.92%:42:5.3843E-5:36:3:0:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:3:4:14:50%:25:2.8986E-3:40:7:3:4:14 0/0:0:0:0:0:10:0%:17:1E0:41:10:4:6:10 0/0:38:3:0:3:10:30%:4:1.0526E-1:38:7:4:3:10 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:19 0/1:35:7:2:5:8:87.5%:31:6.993E-4:34:1:1:0:9 0/1:37:15:2:13:23:65.22%:60:9.5813E-7:38:8:5:3:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:18 0/1:37:16:8:8:20:80%:71:7.7086E-8:38:4:4:0:20 0/1:40:8:4:4:14:57.14%:30:9.6618E-4:38:6:4:2:14 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:35 0/1:36:9:3:6:12:75%:37:1.6826E-4:43:3:1:2:12 0/0:33:1:1:0:12:8.33%:14:5E-1:41:11:4:7:12 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:17 0/0:0:0:0:0:15:0%:29:1E0:38:15:10:5:15 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:16 0/0:37:4:3:1:10:40%:3:4.3344E-2:42:6:3:3:10 0/0:0:0:0:0:13:0%:25:1E0:39:13:7:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:37:15:4:11:21:71.43%:62:5.4994E-7:41:6:4:2:21 0/0:42:5:1:4:12:41.67%:3:1.8634E-2:37:7:4:3:12 0/1:44:9:4:5:19:47.37%:32:5.667E-4:37:10:6:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:17 0/0:0:0:0:0:22:0%:40:1E0:36:22:16:6:23 0/0:0:0:0:0:11:0%:22:1E0:42:11:7:4:11 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:14 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:32 0/0:0:0:0:0:16:0%:29:1E0:41:16:7:9:16 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:20 0/0:0:0:0:0:12:0%:21:1E0:41:12:2:10:12 0/0:38:1:0:1:17:5.88%:24:5E-1:39:16:8:8:18 0/0:0:0:0:0:17:0%:33:1E0:40:17:5:12:17 0/0:37:1:1:0:25:4%:38:5E-1:42:24:13:11:26 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:21 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:13:0%:25:1E0:40:13:4:9:14 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:20 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:19 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:12:0%:21:1E0:39:12:7:5:13 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:21 0/0:0:0:0:0:33:0%:63:1E0:38:33:12:21:34 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:22 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:19 0/0:0:0:0:0:19:0%:37:1E0:40:19:4:15:19 0/0:0:0:0:0:14:0%:25:1E0:37:14:10:4:14 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:27 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:18 0/0:0:0:0:0:21:0%:40:1E0:39:21:15:6:21 0/0:0:0:0:0:11:0%:22:1E0:41:11:4:7:12 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:13:0%:25:1E0:40:13:10:3:14 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:19 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:22 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 0/1:37:8:5:3:17:47.06%:28:1.3389E-3:38:9:4:5:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:4:1:3:15:26.67%:8:4.9808E-2:41:11:4:7:15 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:17 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:18 0/0:0:0:0:0:8:0%:14:1E0:40:8:4:4:9 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:16 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:11:0%:22:1E0:42:11:5:6:12 0/0:0:0:0:0:10:0%:17:1E0:39:10:7:3:11 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:26 0/1:39:6:4:2:13:46.15%:21:7.4534E-3:44:7:4:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 MTB_anc 338768 . G A . PASS AC=101;AF=0.371;AN=272;ANN=A|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.306C>T|p.Ile102Ile|306/2514|306/2514|102/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338768G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338768G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:42:6:4:2:25:24%:14:1.1145E-2:37:19:7:12:25 0/1:44:7:5:2:11:63.64%:27:1.935E-3:37:4:1:3:11 0/1:45:9:3:6:30:30%:30:9.678E-4:41:21:12:9:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:42:5:1:4:17:29.41%:8:2.2239E-2:37:12:5:7:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:12:7:5:22:54.55%:45:3.066E-5:40:10:7:3:23 0/0:41:5:2:3:15:33.33%:6:2.1073E-2:36:10:5:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:42:4:3:1:14:28.57%:6:4.8889E-2:44:10:4:6:14 0/1:42:10:6:4:15:66.67%:40:9.995E-5:46:5:2:3:15 0/1:39:10:6:4:29:34.48%:34:3.8387E-4:38:19:9:10:29 0/0:36:1:0:1:8:12.5%:8:5E-1:39:7:3:4:8 0/1:45:8:4:4:22:36.36%:27:1.8042E-3:38:14:4:10:22 0/1:44:7:2:5:16:43.75%:24:3.3988E-3:39:9:5:4:16 0/0:38:4:1:3:21:19.05%:15:5.3471E-2:39:17:8:9:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:49:4:0:4:15:26.67%:8:4.9808E-2:38:11:6:5:15 0/1:39:11:3:8:21:52.38%:40:8.2399E-5:36:10:4:6:21 0/1:45:13:5:8:29:44.83%:46:2.1506E-5:36:16:11:5:31 0/1:40:7:4:3:14:50%:25:2.8986E-3:38:7:3:4:14 0/1:45:9:6:3:21:42.86%:31:6.592E-4:38:12:6:6:21 0/0:43:5:3:2:13:38.46%:4:1.9565E-2:43:8:5:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:39:1:1:0:9:11.11%:11:5E-1:38:8:4:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:38:10:6:4:16:62.5%:39:1.2413E-4:37:6:3:3:17 0/1:43:9:7:2:25:36%:30:8.1542E-4:42:16:8:8:26 0/1:40:8:2:6:19:42.11%:28:1.5455E-3:39:11:7:4:19 0/1:38:12:9:3:23:52.17%:44:3.4748E-5:38:11:6:5:23 0/1:43:9:3:6:15:60%:34:3.4983E-4:38:6:2:4:15 0/1:44:11:6:5:15:73.33%:46:2.4988E-5:37:4:1:3:15 0/1:39:8:3:5:16:50%:29:1.2236E-3:41:8:3:5:16 0/1:41:11:7:4:23:47.83%:39:1.0135E-4:41:12:8:4:23 0/1:37:8:3:5:23:34.78%:27:1.8791E-3:39:15:9:6:23 0/1:40:14:6:8:24:58.33%:53:4.0663E-6:38:10:7:3:24 0/1:44:12:4:8:23:52.17%:44:3.4748E-5:40:11:5:6:23 0/1:46:13:7:6:25:52%:48:1.4654E-5:40:12:6:6:25 0/1:41:14:9:5:27:51.85%:52:6.1806E-6:39:13:7:6:27 0/1:45:11:5:6:23:47.83%:39:1.0135E-4:37:12:6:6:23 0/0:43:4:3:1:11:36.36%:4:4.5113E-2:44:7:5:2:11 0/0:42:5:3:2:14:35.71%:4:2.037E-2:37:9:5:4:14 0/1:41:14:8:6:25:56%:53:4.7528E-6:39:11:4:7:25 0/1:45:9:4:5:16:56.25%:33:4.0786E-4:42:7:3:4:16 0/1:40:6:3:3:13:46.15%:21:7.4534E-3:40:7:2:5:13 0/1:41:13:10:3:25:52%:48:1.4654E-5:40:12:1:11:26 0/1:38:7:6:1:22:31.82%:23:4.4505E-3:39:15:4:11:22 0/1:45:16:8:8:25:64%:63:4.1493E-7:38:9:4:5:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:9:4:5:30:30%:30:9.678E-4:38:21:6:15:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:40:8:5:3:14:57.14%:30:9.6618E-4:38:6:2:4:14 0/1:42:6:2:4:19:31.58%:20:9.828E-3:40:13:6:7:19 0/1:37:11:6:5:24:45.83%:39:1.1047E-4:39:13:8:5:24 0/1:40:11:8:3:28:39.29%:38:1.4422E-4:35:17:7:10:28 0/1:43:12:6:6:26:46.15%:43:4.6796E-5:39:14:7:7:26 0/1:44:17:11:6:30:56.67%:65:3.0928E-7:38:13:5:8:30 0/0:38:5:2:3:18:27.78%:8:2.2727E-2:44:13:5:8:18 0/0:48:4:2:2:16:25%:8:5.0612E-2:39:12:5:7:16 0/1:42:13:6:7:19:68.42%:53:5.0106E-6:41:6:3:3:19 0/1:39:12:5:7:30:40%:42:6.1809E-5:37:18:7:11:30 0/1:40:8:4:4:13:61.54%:30:8.238E-4:35:5:3:2:13 0/1:41:12:6:6:17:70.59%:49:1.1285E-5:42:5:1:4:17 0/1:43:8:3:5:20:40%:27:1.638E-3:43:12:9:3:20 0/1:38:7:3:4:17:41.18%:24:3.6151E-3:37:10:4:6:17 0/0:49:6:2:4:20:30%:7:1.0098E-2:39:14:7:7:20 0/0:49:4:0:4:12:33.33%:4:4.6584E-2:37:8:6:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:43:8:3:5:16:50%:29:1.2236E-3:42:8:4:4:16 0/0:47:5:2:3:11:45.45%:3:1.7544E-2:41:6:3:3:11 0/1:43:8:5:3:12:66.67%:31:6.7304E-4:37:4:0:4:12 0/1:47:15:9:6:25:60%:58:1.4522E-6:37:10:5:5:25 0/1:41:7:5:2:21:33.33%:23:4.3101E-3:38:14:7:7:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:42:11:7:4:20:55%:41:7.2653E-5:40:9:2:7:20 0/1:40:9:4:5:13:69.23%:36:2.2883E-4:44:4:1:3:13 0/1:39:10:6:4:20:50%:36:2.1796E-4:36:10:4:6:20 0/0:38:6:6:0:22:27.27%:9:1.057E-2:39:16:8:8:22 0/1:38:6:4:2:12:50%:21:6.865E-3:38:6:4:2:12 0/1:44:15:10:5:37:40.54%:52:5.1339E-6:38:22:14:8:37 0/0:42:5:2:3:12:41.67%:3:1.8634E-2:40:7:2:5:12 0/0:38:4:4:0:16:25%:8:5.0612E-2:39:12:3:9:16 0/1:40:10:6:4:26:38.46%:34:3.3576E-4:36:16:6:10:26 0/1:40:9:7:2:20:45%:32:6.1425E-4:36:11:7:4:20 0/0:39:6:2:4:21:28.57%:9:1.0344E-2:38:15:9:6:21 0/0:44:3:2:1:12:25%:6:1.087E-1:41:9:7:2:12 0/1:37:8:4:4:18:44.44%:28:1.4461E-3:43:10:5:5:19 0/1:45:6:3:3:9:66.67%:23:4.5249E-3:38:3:3:0:9 0/1:37:12:6:6:20:60%:46:2.2548E-5:43:8:3:5:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:42:9:4:5:23:39.13%:31:7.4174E-4:38:14:4:10:23 0/1:40:7:4:3:15:46.67%:25:3.1609E-3:42:8:3:5:15 0/1:41:15:11:4:25:60%:58:1.4522E-6:40:10:5:5:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:44:10:7:3:21:47.62%:36:2.3971E-4:40:11:3:8:21 0/1:42:20:15:5:28:71.43%:84:3.9563E-9:37:8:6:2:28 0/1:39:7:5:2:16:43.75%:24:3.3988E-3:37:9:4:5:17 0/1:40:9:3:6:15:60%:34:3.4983E-4:37:6:3:3:15 0/0:38:6:4:2:21:28.57%:9:1.0344E-2:39:15:6:9:21 0/1:46:16:7:9:33:48.48%:58:1.364E-6:39:17:8:9:33 0/1:41:7:6:1:18:38.89%:24:3.8123E-3:38:11:3:8:18 0/0:38:3:2:1:14:21.43%:9:1.1111E-1:37:11:5:6:15 0/0:42:5:0:5:11:45.45%:3:1.7544E-2:36:6:3:3:11 0/1:42:16:7:9:26:61.54%:62:5.1256E-7:37:10:7:3:26 0/1:42:8:4:4:21:38.1%:27:1.7241E-3:40:13:5:8:21 0/1:44:13:7:6:33:39.39%:45:2.8029E-5:38:20:10:10:33 0/0:45:6:0:6:25:24%:14:1.1145E-2:41:19:9:10:25 0/1:38:9:4:5:34:26.47%:29:1.0644E-3:39:25:12:13:34 0/1:47:9:3:6:29:31.03%:30:9.4048E-4:40:20:10:10:29 0/0:45:5:4:1:20:25%:10:2.3562E-2:40:15:8:7:20 0/1:40:7:3:4:16:43.75%:24:3.3988E-3:42:9:4:5:16 0/1:42:10:4:6:32:31.25%:33:4.259E-4:41:22:14:8:33 0/1:38:6:5:1:16:37.5%:20:8.837E-3:39:10:4:6:16 0/1:38:8:6:2:20:40%:27:1.638E-3:34:12:6:6:20 0/1:44:8:3:5:17:47.06%:28:1.3389E-3:40:9:3:6:18 0/1:50:12:5:7:22:54.55%:45:3.066E-5:40:10:7:3:22 0/0:37:5:5:0:17:29.41%:8:2.2239E-2:39:12:5:7:18 0/1:40:15:6:9:31:48.39%:54:3.2298E-6:37:16:7:9:31 0/1:39:10:2:8:31:32.26%:33:4.1251E-4:37:21:10:11:31 0/1:40:8:4:4:21:38.1%:27:1.7241E-3:37:13:5:8:21 0/1:39:11:6:5:26:42.31%:38:1.2791E-4:37:15:7:8:26 0/1:40:8:3:5:19:42.11%:28:1.5455E-3:39:11:5:6:19 0/1:38:13:8:5:26:50%:47:1.6379E-5:41:13:10:3:26 0/1:45:8:0:8:19:42.11%:28:1.5455E-3:38:11:4:7:19 0/0:37:5:3:2:18:27.78%:8:2.2727E-2:38:13:9:4:18 0/1:41:11:5:6:28:39.29%:38:1.4422E-4:38:17:7:10:28 0/0:39:4:2:2:22:18.18%:15:5.3885E-2:37:18:11:7:22 0/1:42:10:10:0:20:50%:36:2.1796E-4:40:10:7:3:20 0/0:43:4:1:3:12:33.33%:4:4.6584E-2:35:8:4:4:12 0/1:42:17:9:8:28:60.71%:66:2.1913E-7:41:11:6:5:28 0/1:42:10:5:5:19:52.63%:37:1.9541E-4:39:9:6:3:19 0/1:38:6:4:2:19:31.58%:20:9.828E-3:40:13:6:7:19 0/1:42:9:4:5:26:34.62%:30:8.4928E-4:37:17:10:7:26 0/1:41:12:6:6:16:75%:50:8.0605E-6:47:4:2:2:16 0/1:37:10:4:6:20:50%:36:2.1796E-4:40:10:7:3:20 0/1:41:6:6:0:9:66.67%:23:4.5249E-3:36:3:3:0:9 0/1:42:11:4:7:19:57.89%:42:6.2811E-5:40:8:3:5:19 0/0:38:5:2:3:22:22.73%:12:2.4248E-2:38:17:10:7:22 0/1:44:11:5:6:26:42.31%:38:1.2791E-4:40:15:6:9:27 0/0:44:4:2:2:10:40%:3:4.3344E-2:37:6:3:3:10 0/1:39:9:5:4:16:56.25%:33:4.0786E-4:37:7:6:1:16 0/1:42:10:5:5:25:40%:34:3.1821E-4:40:15:9:6:25 0/0:37:5:1:4:12:41.67%:3:1.8634E-2:37:7:6:1:12 0/0:38:4:3:1:14:28.57%:6:4.8889E-2:40:10:6:4:15 0/0:37:1:0:1:15:6.67%:21:5E-1:39:14:7:7:15 0/1:44:10:6:4:31:32.26%:33:4.1251E-4:40:21:13:8:31 0/1:43:10:6:4:18:55.56%:37:1.7215E-4:37:8:6:2:18 0/1:44:6:3:3:12:50%:21:6.865E-3:38:6:2:4:12 MTB_anc 338774 . G A . PASS AC=278;AF=1.00;AN=278;ANN=A|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.300C>T|p.Ala100Ala|300/2514|300/2514|100/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338774G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338774G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:18:12:6:19:94.74%:92:5.6585E-10:34:1:0:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 MTB_anc 338775 . G T . PASS AC=278;AF=1.00;AN=278;ANN=T|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.299C>A|p.Ala100Asp|299/2514|299/2514|100/837||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338775G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338775G>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:18:12:6:19:94.74%:92:5.6585E-10:38:1:0:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 MTB_anc 338777 . G C . PASS AC=280;AF=1.00;AN=280;ANN=C|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.297C>G|p.Leu99Leu|297/2514|297/2514|99/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338777G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338777G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:12:11:24:95.83%:99:1.2146E-13:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:18:12:6:19:94.74%:92:5.6585E-10:38:1:0:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:10:5:5:11:90.91%:52:5.4125E-6:0:0:0:0:12 MTB_anc 338789 . G C . PASS AC=280;AF=1.00;AN=280;ANN=C|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.285C>G|p.Thr95Thr|285/2514|285/2514|95/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338789G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338789G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:20:13:7:21:95.24%:99:4.0873E-11:37:1:1:0:21 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:17:12:5:18:94.44%:86:2.0936E-9:38:1:0:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 MTB_anc 338790 . G A . PASS AC=278;AF=1.00;AN=278;ANN=A|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.284C>T|p.Thr95Ile|284/2514|284/2514|95/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338790G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338790G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:23:13:10:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:41:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:16:11:5:17:94.12%:81:7.7134E-9:38:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 MTB_anc 338791 . T C . PASS AC=280;AF=1.00;AN=280;ANN=C|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.283A>G|p.Thr95Ala|283/2514|283/2514|95/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338791T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338791T>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:21:10:11:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:12:12:25:96%:99:3.101E-14:0:0:0:0:25 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:16:11:5:17:94.12%:81:7.7134E-9:38:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 MTB_anc 338792 . G C . PASS AC=280;AF=1.00;AN=280;ANN=C|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.282C>G|p.Ala94Ala|282/2514|282/2514|94/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338792G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338792G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:10:11:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:15:7:8:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:15:11:4:16:93.75%:75:2.8282E-8:38:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 MTB_anc 338810 . G C . PASS AC=136;AF=0.463;AN=294;ANN=C|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.264C>G|p.Ala88Ala|264/2514|264/2514|88/837||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338810G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338810G>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:39:21:8:13:30:70%:87:1.7919E-9:40:9:4:5:31 0/0:49:3:2:1:13:23.08%:9:1.1E-1:41:10:6:4:13 0/1:44:32:15:17:50:64%:99:1.2624E-13:43:18:5:13:50 0/1:39:6:4:2:11:54.55%:22:6.192E-3:33:5:4:1:11 0/1:40:10:5:5:18:55.56%:37:1.7215E-4:48:8:3:5:20 0/0:34:4:1:3:13:30.77%:6:4.7826E-2:39:9:4:5:13 0/1:44:11:8:3:28:39.29%:38:1.4422E-4:45:17:9:8:30 0/1:40:10:5:5:18:55.56%:37:1.7215E-4:37:8:4:4:19 0/1:39:7:3:4:16:43.75%:24:3.3988E-3:39:9:5:4:16 0/1:41:13:5:8:22:59.09%:50:9.5813E-6:47:9:5:4:23 0/0:44:6:2:4:25:24%:14:1.1145E-2:45:19:13:6:25 0/1:41:24:13:11:37:64.86%:96:2.0323E-10:40:13:9:4:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:41:14:4:10:37:37.84%:48:1.3393E-5:40:23:13:10:37 0/1:40:7:3:4:17:41.18%:24:3.6151E-3:42:10:2:8:18 0/1:38:12:7:5:18:66.67%:48:1.4831E-5:41:6:3:3:19 0/1:37:7:3:4:13:53.85%:25:2.6087E-3:44:6:1:5:13 0/0:37:5:3:2:14:35.71%:4:2.037E-2:45:9:3:6:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:40:12:6:6:19:63.16%:47:1.8611E-5:50:7:2:5:20 0/1:40:8:3:5:25:32%:26:2.0146E-3:41:17:6:11:25 0/1:39:20:14:6:36:55.56%:76:2.3419E-8:45:16:5:11:38 0/1:39:10:5:5:20:50%:36:2.1796E-4:40:10:6:4:21 0/1:39:12:6:6:28:42.86%:42:5.4482E-5:41:16:11:5:28 0/1:42:9:5:4:21:42.86%:31:6.592E-4:41:12:7:5:21 0/1:41:10:4:6:15:66.67%:40:9.995E-5:37:5:3:2:15 0/1:42:11:5:6:19:57.89%:42:6.2811E-5:43:8:5:3:20 0/1:47:7:4:3:19:36.84%:23:3.9926E-3:39:12:4:8:19 0/0:37:3:1:2:22:13.64%:19:1.1628E-1:41:19:12:7:22 0/1:45:17:8:9:36:47.22%:61:6.3405E-7:43:19:11:8:36 0/1:41:13:7:6:30:43.33%:46:2.3178E-5:41:17:4:13:31 0/1:38:14:9:5:32:43.75%:50:9.8512E-6:40:18:10:8:34 0/1:45:8:4:4:22:36.36%:27:1.8042E-3:47:14:6:8:22 0/1:41:7:3:4:23:30.43%:23:4.5803E-3:43:16:9:7:23 0/1:44:11:4:7:24:45.83%:39:1.1047E-4:41:13:7:6:24 0/1:42:14:10:4:31:45.16%:50:9.1194E-6:43:17:10:7:31 0/1:40:18:8:10:33:54.55%:68:1.5143E-7:40:15:4:11:33 0/1:39:22:15:7:42:52.38%:82:5.4836E-9:43:20:9:11:43 0/1:41:17:10:7:37:45.95%:61:6.9312E-7:48:20:8:12:37 0/1:39:18:11:7:35:51.43%:67:1.9562E-7:45:17:9:8:35 0/1:40:18:10:8:36:50%:66:2.1904E-7:43:18:11:7:36 0/1:43:15:7:8:28:53.57%:56:2.3037E-6:51:13:6:7:28 0/1:39:10:6:4:19:52.63%:37:1.9541E-4:45:9:6:3:19 0/1:44:13:7:6:20:65%:51:6.4422E-6:43:7:5:2:20 0/1:41:12:4:8:40:30%:40:9.2733E-5:39:28:13:15:40 0/1:45:9:3:6:27:33.33%:30:8.8132E-4:40:18:10:8:28 0/0:36:5:3:2:20:26.32%:10:2.3166E-2:42:14:7:7:21 0/1:45:17:4:13:39:43.59%:60:8.1342E-7:38:22:15:7:42 0/1:40:24:8:16:42:57.14%:92:5.5097E-10:40:18:14:4:42 0/1:45:11:6:5:35:31.43%:37:1.9282E-4:43:24:11:13:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:40:20:7:13:42:47.62%:73:4.3347E-8:43:21:10:11:42 0/1:39:6:2:4:17:35.29%:20:9.2021E-3:38:11:4:7:17 0/1:39:10:5:5:23:43.48%:35:2.8066E-4:41:13:7:6:23 0/1:40:14:7:7:23:60.87%:54:3.4067E-6:41:9:4:5:23 0/1:40:18:6:12:37:48.65%:66:2.432E-7:35:19:9:10:37 0/1:39:17:8:9:36:47.22%:61:6.3405E-7:39:19:11:8:36 0/1:39:16:8:8:33:48.48%:58:1.364E-6:45:17:10:7:33 0/1:42:12:5:7:41:29.27%:40:9.5339E-5:45:29:19:10:41 0/1:39:15:6:9:24:62.5%:59:1.196E-6:41:9:3:6:24 0/1:39:12:6:6:21:57.14%:45:2.658E-5:47:9:4:5:21 0/1:40:11:5:6:31:35.48%:37:1.6659E-4:40:20:9:11:31 0/1:40:17:8:9:34:50%:62:5.1914E-7:42:17:8:9:34 0/1:39:10:6:4:21:47.62%:36:2.3971E-4:43:11:6:5:21 0/1:45:9:3:6:29:31.03%:30:9.4048E-4:40:20:7:13:30 0/1:41:12:9:3:29:41.38%:42:5.8193E-5:41:17:8:9:30 0/1:41:11:5:6:25:44%:39:1.1933E-4:42:14:5:9:26 0/1:39:22:10:12:36:61.11%:86:2.1194E-9:41:14:4:10:36 0/1:41:11:9:2:20:55%:41:7.2653E-5:47:9:2:7:20 0/1:40:9:5:4:15:60%:34:3.4983E-4:43:6:1:5:15 0/1:43:12:7:5:23:52.17%:44:3.4748E-5:44:11:3:8:23 0/1:41:9:5:4:16:56.25%:33:4.0786E-4:43:7:3:4:16 0/0:38:4:0:4:13:30.77%:6:4.7826E-2:51:9:6:3:13 0/1:45:11:6:5:32:34.38%:37:1.7351E-4:47:21:12:9:32 0/1:38:15:10:5:32:46.88%:54:3.5464E-6:38:17:9:8:33 0/1:41:13:7:6:24:54.17%:48:1.2938E-5:37:11:5:6:24 0/1:36:14:6:8:37:37.84%:48:1.2704E-5:41:22:11:11:39 0/1:40:7:3:4:19:36.84%:23:3.9926E-3:45:12:6:6:19 0/1:39:12:7:5:31:38.71%:42:6.1809E-5:42:18:10:8:31 0/1:39:17:7:10:29:58.62%:65:2.627E-7:38:12:9:3:29 0/1:37:12:9:3:20:60%:46:2.2548E-5:39:8:5:3:20 0/1:41:19:12:7:48:39.58%:66:2.0555E-7:44:29:18:11:50 0/1:38:11:4:7:22:50%:40:9.1981E-5:36:11:6:5:22 0/1:43:16:4:12:24:66.67%:64:3.2617E-7:42:8:5:3:25 0/1:38:14:6:8:29:48.28%:51:7.6466E-6:44:15:8:7:29 0/1:40:9:4:5:24:37.5%:31:7.7962E-4:43:15:8:7:24 0/1:37:12:5:7:24:50%:44:3.8815E-5:43:12:6:6:24 0/1:41:11:7:4:16:68.75%:44:3.3854E-5:45:5:3:2:16 0/1:43:10:5:5:25:40%:34:3.1821E-4:40:15:6:9:25 0/0:37:5:4:1:20:25%:10:2.3562E-2:46:15:4:11:20 0/1:42:13:6:7:31:41.94%:46:2.4825E-5:41:18:11:7:31 0/0:41:4:2:2:11:36.36%:4:4.5113E-2:39:7:2:5:11 0/1:43:14:5:9:30:46.67%:50:8.3837E-6:38:16:6:10:30 0/1:43:11:5:6:28:39.29%:38:1.4422E-4:41:17:7:10:28 0/1:45:12:6:6:42:28.57%:40:9.7866E-5:41:30:21:9:42 0/1:37:7:3:4:16:43.75%:24:3.3988E-3:39:9:6:3:16 0/1:40:12:6:6:28:42.86%:42:5.4482E-5:39:16:11:5:28 0/1:42:12:7:5:37:32.43%:40:8.4418E-5:44:25:19:6:37 0/1:38:18:10:8:25:72%:75:2.6626E-8:39:7:5:2:27 0/1:37:14:8:6:30:46.67%:50:8.3837E-6:38:16:5:11:30 0/1:41:11:4:7:25:44%:39:1.1933E-4:44:14:10:4:26 0/1:43:16:11:5:43:37.21%:55:2.7433E-6:43:27:14:13:44 0/1:37:11:6:5:21:52.38%:40:8.2399E-5:38:10:9:1:21 0/1:37:12:3:9:23:52.17%:44:3.4748E-5:37:11:5:6:24 0/0:39:5:2:3:15:33.33%:6:2.1073E-2:36:10:2:8:16 0/1:42:10:7:3:32:31.25%:33:4.259E-4:45:22:9:13:32 0/1:41:14:4:10:33:42.42%:49:1.0577E-5:41:19:9:10:34 0/1:42:23:11:12:39:58.97%:89:1.093E-9:44:16:10:6:41 0/1:42:27:12:15:37:72.97%:99:2.9655E-12:44:10:3:7:39 0/1:42:27:13:14:43:62.79%:99:1.6529E-11:42:16:8:8:43 0/1:39:21:11:10:41:51.22%:78:1.4682E-8:43:20:9:11:41 0/1:41:13:9:4:22:59.09%:50:9.5813E-6:44:9:6:3:23 0/1:37:8:3:5:20:40%:27:1.638E-3:36:12:6:6:21 0/1:42:24:12:12:37:64.86%:96:2.0323E-10:39:13:5:8:38 0/1:40:17:12:5:32:53.12%:64:3.5853E-7:36:14:5:9:34 0/1:36:14:8:6:29:48.28%:51:7.6466E-6:36:15:9:6:29 0/1:39:13:8:5:25:52%:48:1.4654E-5:42:12:7:5:27 0/1:40:12:8:4:28:42.86%:42:5.4482E-5:47:16:8:8:30 0/1:41:17:10:7:33:51.52%:63:4.6376E-7:35:16:11:5:33 0/1:41:18:10:8:36:50%:66:2.1904E-7:40:18:8:10:36 0/1:39:20:11:9:39:51.28%:74:3.4806E-8:42:19:7:12:41 0/1:42:13:6:7:28:46.43%:47:1.9812E-5:41:15:8:7:28 0/1:40:14:6:8:30:46.67%:50:8.3837E-6:40:16:9:7:31 0/1:38:19:9:10:33:57.58%:73:4.7323E-8:39:14:6:8:34 0/1:40:14:10:4:31:45.16%:50:9.1194E-6:37:17:11:6:31 0/1:36:10:3:7:27:37.04%:34:3.5253E-4:43:17:6:11:27 0/1:37:16:12:4:28:57.14%:61:7.3043E-7:35:12:8:4:29 0/1:39:19:9:10:40:47.5%:69:1.1326E-7:40:21:10:11:40 0/1:36:22:16:6:30:73.33%:93:4.1351E-10:36:8:6:2:30 0/1:45:12:9:3:26:46.15%:43:4.6796E-5:40:14:13:1:26 0/1:41:8:4:4:17:47.06%:28:1.3389E-3:36:9:4:5:19 0/1:38:11:5:6:39:28.21%:36:2.1547E-4:38:28:17:11:39 0/1:39:15:9:6:39:38.46%:52:5.7558E-6:37:24:13:11:39 0/1:38:15:8:7:23:65.22%:60:9.5813E-7:39:8:5:3:24 0/1:38:15:10:5:30:50%:55:2.9161E-6:40:15:6:9:31 0/0:51:6:2:4:21:28.57%:9:1.0344E-2:42:15:8:7:21 0/1:39:14:8:6:31:45.16%:50:9.1194E-6:36:17:11:6:31 0/1:36:10:8:2:21:47.62%:36:2.3971E-4:39:11:8:3:22 0/1:38:11:6:5:30:36.67%:37:1.594E-4:40:19:12:7:30 0/1:43:18:11:7:28:64.29%:72:6.1806E-8:36:10:4:6:28 0/1:42:17:6:11:32:53.12%:63:4.1013E-7:44:15:7:8:32 0/1:36:9:5:4:15:60%:34:3.4983E-4:45:6:3:3:15 0/1:37:10:9:1:25:40%:34:3.1821E-4:42:15:7:8:26 0/1:43:22:13:9:33:66.67%:89:1.0623E-9:45:11:5:6:33 0/1:43:8:7:1:16:50%:29:1.2236E-3:42:8:3:5:16 0/1:41:11:5:6:16:68.75%:44:3.3854E-5:42:5:3:2:18 0/1:40:16:8:8:19:84.21%:73:4.357E-8:36:3:1:2:19 0/1:41:22:11:11:39:56.41%:84:3.6006E-9:42:17:11:6:39 0/1:39:11:8:3:28:39.29%:38:1.4422E-4:44:17:9:8:28 0/1:36:8:4:4:22:36.36%:27:1.8042E-3:39:14:8:6:22 MTB_anc 338813 . G A . PASS AC=137;AF=0.466;AN=294;ANN=A|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.261C>T|p.Tyr87Tyr|261/2514|261/2514|87/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338813G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338813G>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:20:8:12:29:68.97%:82:5.4216E-9:39:9:4:5:30 0/0:52:3:2:1:12:25%:6:1.087E-1:42:9:5:4:13 0/1:45:33:15:18:51:64.71%:99:4.3121E-14:42:18:5:13:51 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:40:11:5:6:20:55%:41:7.2653E-5:47:9:3:6:20 0/0:35:4:1:3:13:30.77%:6:4.7826E-2:41:9:4:5:13 0/1:45:12:9:3:29:41.38%:42:5.8193E-5:46:17:9:8:30 0/1:42:9:5:4:18:50%:32:5.1645E-4:40:9:5:4:19 0/1:39:7:2:5:16:43.75%:24:3.3988E-3:38:9:5:4:17 0/1:43:12:5:7:23:52.17%:45:3.066E-5:44:10:5:5:24 0/1:44:8:3:5:27:29.63%:26:2.1337E-3:45:19:13:6:27 0/1:41:24:13:11:40:60%:94:3.8741E-10:41:16:10:6:40 0/0:42:5:2:3:11:45.45%:3:1.7544E-2:44:6:1:5:11 0/1:42:14:4:10:37:37.84%:48:1.3393E-5:40:23:13:10:37 0/1:39:7:3:4:18:38.89%:24:3.8123E-3:41:11:3:8:18 0/1:37:12:7:5:19:63.16%:47:1.8611E-5:39:7:3:4:19 0/1:37:7:3:4:13:53.85%:25:2.6087E-3:44:6:1:5:13 0/0:37:5:3:2:15:33.33%:6:2.1073E-2:46:10:3:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:40:12:6:6:21:57.14%:45:2.658E-5:46:9:3:6:21 0/1:38:8:3:5:25:32%:26:2.0146E-3:41:17:6:11:25 0/1:40:20:14:6:37:54.05%:75:2.7004E-8:44:17:5:12:38 0/1:41:11:5:6:22:50%:40:9.1981E-5:41:11:6:5:22 0/1:39:12:6:6:30:40%:42:6.1809E-5:40:18:12:6:30 0/1:42:9:5:4:22:40.91%:31:7.0165E-4:41:13:7:6:22 0/1:40:10:4:6:16:62.5%:39:1.2413E-4:36:6:4:2:16 0/1:41:11:5:6:20:55%:41:7.2653E-5:42:9:6:3:20 0/1:47:7:4:3:19:36.84%:23:3.9926E-3:40:12:4:8:19 0/0:36:3:1:2:24:12.5%:22:1.1702E-1:42:21:13:8:24 0/1:45:16:8:8:35:45.71%:57:1.637E-6:43:19:11:8:36 0/1:41:13:7:6:30:43.33%:46:2.3178E-5:41:17:4:13:31 0/1:38:15:9:6:34:44.12%:53:4.1835E-6:40:19:11:8:34 0/1:46:8:4:4:22:36.36%:27:1.8042E-3:47:14:6:8:22 0/1:39:8:4:4:24:33.33%:27:1.949E-3:43:16:9:7:24 0/1:45:11:4:7:27:40.74%:38:1.362E-4:40:16:9:7:27 0/1:40:15:11:4:32:46.88%:54:3.5464E-6:46:17:10:7:32 0/1:40:19:8:11:34:55.88%:72:5.5375E-8:40:15:4:11:34 0/1:39:22:15:7:43:51.16%:82:6.1932E-9:42:21:9:12:44 0/1:41:17:10:7:37:45.95%:61:6.9312E-7:48:20:8:12:37 0/1:40:19:11:8:37:51.35%:70:8.2514E-8:45:18:10:8:37 0/1:40:18:10:8:36:50%:66:2.1904E-7:43:18:11:7:36 0/1:41:15:7:8:28:53.57%:56:2.3037E-6:50:13:6:7:28 0/1:39:10:6:4:19:52.63%:37:1.9541E-4:44:9:6:3:19 0/1:44:13:7:6:21:61.9%:50:7.9741E-6:45:8:5:3:21 0/1:42:12:4:8:40:30%:40:9.2733E-5:40:28:13:15:40 0/1:43:10:3:7:29:34.48%:34:3.8387E-4:39:19:11:8:29 0/0:37:6:3:3:20:30%:7:1.0098E-2:43:14:7:7:22 0/1:45:17:4:13:43:39.53%:59:1.0581E-6:38:26:18:8:44 0/1:40:23:7:16:42:54.76%:87:1.7689E-9:41:19:15:4:43 0/1:44:12:6:6:37:32.43%:40:8.4418E-5:43:25:12:13:37 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:39:20:7:13:42:47.62%:73:4.7857E-8:43:22:11:11:42 0/1:41:6:2:4:16:37.5%:20:8.837E-3:37:10:4:6:17 0/1:39:10:5:5:23:43.48%:35:2.8066E-4:41:13:7:6:23 0/1:40:14:7:7:23:60.87%:54:3.4067E-6:41:9:4:5:23 0/1:42:18:6:12:39:46.15%:65:2.9336E-7:35:21:10:11:39 0/1:39:16:8:8:35:45.71%:57:1.637E-6:41:19:11:8:36 0/1:39:16:8:8:34:47.06%:58:1.4997E-6:46:18:10:8:34 0/1:44:12:5:7:41:29.27%:40:9.5339E-5:45:29:19:10:41 0/1:39:14:5:9:23:60.87%:54:3.4067E-6:42:9:3:6:23 0/1:40:12:6:6:23:52.17%:44:3.4748E-5:44:11:6:5:23 0/1:41:11:5:6:30:36.67%:37:1.594E-4:40:19:8:11:31 0/1:40:17:8:9:35:48.57%:62:5.7598E-7:41:18:9:9:35 0/1:39:10:6:4:21:47.62%:36:2.3971E-4:43:11:6:5:21 0/1:47:9:3:6:31:29.03%:30:9.9376E-4:43:22:9:13:31 0/1:40:12:9:3:31:38.71%:41:6.5329E-5:41:19:10:9:31 0/1:41:11:5:6:26:42.31%:38:1.2791E-4:42:15:5:10:26 0/1:39:22:10:12:36:61.11%:86:2.1194E-9:40:14:4:10:36 0/1:40:11:9:2:19:57.89%:42:6.2811E-5:49:8:2:6:20 0/1:40:8:4:4:14:57.14%:30:9.6618E-4:43:6:1:5:15 0/1:44:12:7:5:23:52.17%:44:3.4748E-5:43:11:3:8:23 0/1:45:9:5:4:18:50%:32:5.1645E-4:41:9:3:6:18 0/0:36:5:1:4:14:35.71%:4:2.037E-2:52:9:6:3:14 0/1:45:11:6:5:34:32.35%:37:1.8662E-4:47:23:12:11:34 0/1:38:16:10:6:34:47.06%:58:1.4997E-6:37:18:9:9:34 0/1:42:12:7:5:22:54.55%:45:3.066E-5:38:10:5:5:24 0/1:38:15:6:9:39:38.46%:52:5.7558E-6:40:24:13:11:40 0/1:39:7:3:4:18:38.89%:24:3.8123E-3:45:11:5:6:19 0/1:41:11:6:5:28:39.29%:38:1.4422E-4:44:17:10:7:31 0/1:38:17:7:10:29:58.62%:65:2.627E-7:37:12:9:3:29 0/1:37:12:9:3:22:54.55%:45:3.066E-5:38:10:6:4:22 0/1:41:19:12:7:51:37.25%:66:2.4191E-7:43:32:20:12:51 0/1:39:10:4:6:21:47.62%:36:2.3971E-4:37:11:6:5:22 0/1:42:17:4:13:26:65.38%:68:1.4238E-7:41:9:6:3:26 0/1:38:16:6:10:30:53.33%:60:9.7202E-7:44:14:7:7:31 0/1:40:9:4:5:24:37.5%:31:7.7962E-4:41:15:8:7:25 0/1:39:12:5:7:24:50%:44:3.8815E-5:44:12:6:6:24 0/1:40:11:7:4:17:64.71%:43:4.3258E-5:39:6:4:2:17 0/1:43:10:5:5:25:40%:34:3.1821E-4:41:15:6:9:25 0/0:37:5:4:1:20:25%:10:2.3562E-2:47:15:4:11:20 0/1:42:13:6:7:31:41.94%:46:2.4825E-5:41:18:11:7:31 0/0:42:4:2:2:11:36.36%:4:4.5113E-2:38:7:2:5:11 0/1:42:14:5:9:30:46.67%:50:8.3837E-6:39:16:6:10:30 0/1:41:12:6:6:29:41.38%:42:5.8193E-5:42:17:7:10:30 0/1:44:12:6:6:43:27.91%:39:1.0032E-4:41:31:21:10:43 0/1:38:7:3:4:17:41.18%:24:3.6151E-3:38:10:7:3:17 0/1:41:11:5:6:27:40.74%:38:1.362E-4:39:16:11:5:28 0/1:40:12:7:5:37:32.43%:40:8.4418E-5:44:25:19:6:37 0/1:38:18:10:8:28:64.29%:72:6.1806E-8:37:10:8:2:28 0/1:39:14:8:6:31:45.16%:50:9.1194E-6:38:17:6:11:31 0/1:41:12:5:7:26:46.15%:43:4.6796E-5:45:14:10:4:26 0/1:41:18:13:5:45:40%:63:4.5278E-7:43:27:14:13:45 0/1:37:10:5:5:22:45.45%:35:2.6061E-4:37:12:9:3:23 0/1:38:12:3:9:25:48%:43:4.2836E-5:37:13:6:7:25 0/0:40:5:2:3:17:29.41%:8:2.2239E-2:37:12:3:9:17 0/1:41:10:7:3:32:31.25%:33:4.259E-4:46:22:9:13:32 0/1:42:15:5:10:34:44.12%:53:4.1835E-6:40:19:9:10:34 0/1:41:25:12:13:42:59.52%:97:1.6529E-10:44:17:11:6:44 0/1:41:27:12:15:39:69.23%:99:5.8329E-12:45:12:3:9:39 0/1:43:27:13:14:44:61.36%:99:2.0452E-11:42:17:9:8:44 0/1:40:21:11:10:41:51.22%:78:1.4682E-8:41:20:9:11:41 0/1:40:13:9:4:24:54.17%:48:1.2938E-5:41:11:8:3:24 0/1:40:7:3:4:19:36.84%:23:3.9926E-3:38:12:7:5:21 0/1:44:23:12:11:36:63.89%:92:5.9342E-10:39:13:5:8:38 0/1:40:17:12:5:34:50%:62:5.1914E-7:35:17:7:10:34 0/1:36:16:8:8:31:51.61%:59:1.0995E-6:36:15:9:6:31 0/1:39:14:8:6:26:53.85%:52:5.4595E-6:42:12:7:5:27 0/1:42:14:8:6:32:43.75%:50:9.8512E-6:47:18:8:10:33 0/1:42:16:9:7:32:50%:59:1.2304E-6:38:16:11:5:33 0/1:42:18:10:8:36:50%:66:2.1904E-7:40:18:8:10:36 0/1:39:21:10:11:40:52.5%:78:1.2997E-8:41:19:7:12:40 0/1:41:14:7:7:29:48.28%:51:7.6466E-6:41:15:8:7:29 0/1:40:14:6:8:31:45.16%:50:9.1194E-6:41:17:9:8:31 0/1:38:20:9:11:34:58.82%:77:1.6951E-8:38:14:6:8:34 0/1:42:13:9:4:30:43.33%:46:2.3178E-5:38:17:11:6:30 0/1:37:11:4:7:27:40.74%:38:1.362E-4:41:16:6:10:28 0/1:38:17:12:5:30:56.67%:65:3.0928E-7:35:13:8:5:32 0/1:39:17:8:9:38:44.74%:61:7.5297E-7:39:21:10:11:40 0/1:37:22:16:6:30:73.33%:93:4.1351E-10:36:8:6:2:31 0/1:44:12:9:3:25:48%:43:4.2836E-5:41:13:12:1:26 0/1:41:9:4:5:18:50%:32:5.1645E-4:39:9:4:5:19 0/1:38:11:5:6:38:28.95%:36:2.1011E-4:39:27:17:10:39 0/1:40:15:9:6:38:39.47%:52:5.4463E-6:37:23:12:11:39 0/1:39:16:8:8:25:64%:63:4.1493E-7:41:9:6:3:25 0/1:40:15:10:5:31:48.39%:54:3.2298E-6:40:16:7:9:31 0/1:48:7:2:5:22:31.82%:23:4.4505E-3:41:15:8:7:22 0/1:39:14:8:6:31:45.16%:50:9.1194E-6:36:17:11:6:31 0/1:37:11:9:2:23:47.83%:39:1.0135E-4:39:12:9:3:23 0/1:40:11:6:5:30:36.67%:37:1.594E-4:39:19:12:7:30 0/1:42:17:10:7:28:60.71%:66:2.1913E-7:35:11:5:6:29 0/1:41:17:6:11:32:53.12%:63:4.1013E-7:45:15:7:8:32 0/1:36:9:5:4:15:60%:34:3.4983E-4:45:6:3:3:16 0/1:38:11:9:2:27:40.74%:38:1.362E-4:42:16:7:9:27 0/1:44:22:13:9:33:66.67%:89:1.0623E-9:45:11:5:6:33 0/1:42:8:7:1:16:50%:29:1.2236E-3:47:8:3:5:16 0/1:39:13:5:8:18:72.22%:54:3.7078E-6:42:5:3:2:19 0/1:39:16:8:8:20:80%:71:7.7086E-8:36:4:2:2:20 0/1:43:22:11:11:39:56.41%:84:3.6006E-9:41:17:11:6:39 0/1:39:11:8:3:28:39.29%:38:1.4422E-4:43:17:9:8:29 0/1:36:8:4:4:22:36.36%:27:1.8042E-3:38:14:9:5:23 MTB_anc 338816 . C G . PASS AC=141;AF=0.476;AN=296;ANN=G|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.258G>C|p.Ala86Ala|258/2514|258/2514|86/837||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338816C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338816C>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:21:8:13:30:70%:87:1.7919E-9:39:9:4:5:31 0/0:53:3:2:1:13:23.08%:9:1.1E-1:41:10:6:4:13 0/1:45:34:15:19:51:66.67%:99:1.1249E-14:42:17:5:12:52 0/1:40:6:4:2:11:54.55%:22:6.192E-3:36:5:4:1:11 0/1:38:12:5:7:21:57.14%:45:2.658E-5:47:9:3:6:21 0/0:36:4:1:3:13:30.77%:6:4.7826E-2:42:9:4:5:13 0/1:44:13:9:4:30:43.33%:46:2.3178E-5:43:17:9:8:31 0/1:41:10:5:5:18:55.56%:37:1.7215E-4:40:8:4:4:19 0/1:43:8:3:5:17:47.06%:28:1.3389E-3:38:9:5:4:17 0/1:46:14:5:9:23:60.87%:54:3.4067E-6:45:9:5:4:24 0/1:47:7:3:4:26:26.92%:23:4.9169E-3:45:19:14:5:28 0/1:42:23:12:11:39:58.97%:89:1.093E-9:40:16:10:6:40 0/1:45:6:3:3:12:50%:21:6.865E-3:48:6:1:5:12 0/1:41:14:4:10:37:37.84%:48:1.3393E-5:40:23:13:10:38 0/1:42:8:4:4:19:42.11%:28:1.5455E-3:41:11:3:8:19 0/1:39:12:7:5:19:63.16%:47:1.8611E-5:40:7:3:4:19 0/1:41:7:3:4:13:53.85%:25:2.6087E-3:44:6:1:5:13 0/0:37:5:3:2:15:33.33%:6:2.1073E-2:46:10:3:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:41:12:6:6:21:57.14%:45:2.658E-5:47:9:3:6:21 0/1:40:8:3:5:26:30.77%:26:2.076E-3:41:18:6:12:26 0/1:39:22:16:6:41:53.66%:83:4.8137E-9:41:19:7:12:41 0/1:41:11:5:6:21:52.38%:40:8.2399E-5:40:10:6:4:22 0/1:39:13:7:6:31:41.94%:46:2.4825E-5:40:18:12:6:31 0/1:42:9:5:4:22:40.91%:31:7.0165E-4:41:13:7:6:22 0/1:41:10:4:6:16:62.5%:39:1.2413E-4:36:6:4:2:16 0/1:43:11:5:6:20:55%:41:7.2653E-5:41:9:6:3:20 0/1:49:8:4:4:19:42.11%:28:1.5455E-3:43:11:4:7:20 0/0:44:3:1:2:24:12.5%:22:1.1702E-1:41:21:13:8:24 0/1:44:18:9:9:37:48.65%:66:2.432E-7:43:19:11:8:37 0/1:42:15:8:7:33:45.45%:54:3.8647E-6:39:18:4:14:33 0/1:39:14:9:5:33:42.42%:49:1.0577E-5:42:19:11:8:34 0/1:45:9:5:4:24:37.5%:31:7.7962E-4:46:15:6:9:24 0/1:40:8:4:4:24:33.33%:27:1.949E-3:42:16:9:7:24 0/1:44:11:4:7:26:42.31%:38:1.2791E-4:41:15:9:6:28 0/1:41:15:11:4:32:46.88%:54:3.5464E-6:44:17:10:7:32 0/1:40:19:8:11:33:57.58%:73:4.7323E-8:40:14:4:10:34 0/1:40:24:17:7:45:53.33%:90:8.5784E-10:42:21:9:12:46 0/1:42:18:11:7:38:47.37%:65:2.68E-7:48:20:8:12:38 0/1:41:18:11:7:36:50%:66:2.1904E-7:45:18:10:8:37 0/1:40:19:10:9:37:51.35%:70:8.2514E-8:44:18:11:7:37 0/1:44:14:7:7:28:50%:51:6.911E-6:49:14:6:8:29 0/1:40:10:6:4:20:50%:36:2.1796E-4:45:10:6:4:20 0/1:44:13:7:6:20:65%:51:6.4422E-6:46:7:4:3:21 0/1:42:13:4:9:39:33.33%:44:3.6837E-5:40:26:12:14:41 0/1:42:11:4:7:32:34.38%:37:1.7351E-4:39:21:11:10:32 0/0:41:6:3:3:21:30%:7:1.0098E-2:42:14:8:6:22 0/1:44:18:5:13:44:40.91%:63:4.2568E-7:38:26:18:8:45 0/1:41:25:9:16:44:56.82%:96:2.3358E-10:41:19:15:4:45 0/1:42:15:7:8:41:36.59%:52:6.0618E-6:44:25:12:13:41 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:40:21:7:14:45:46.67%:76:2.2206E-8:40:24:11:13:45 0/1:39:7:3:4:18:38.89%:24:3.8123E-3:38:11:4:7:18 0/1:42:10:5:5:24:41.67%:35:2.9985E-4:41:14:7:7:25 0/1:40:13:7:6:23:56.52%:49:1.1242E-5:43:10:5:5:23 0/1:43:19:7:12:40:47.5%:69:1.1326E-7:37:21:10:11:40 0/1:39:18:8:10:37:48.65%:66:2.432E-7:42:19:11:8:37 0/1:41:16:8:8:33:48.48%:58:1.364E-6:47:17:10:7:34 0/1:44:12:5:7:42:28.57%:40:9.7866E-5:45:30:20:10:42 0/1:40:15:5:10:24:62.5%:59:1.196E-6:41:9:3:6:25 0/1:40:13:6:7:24:54.17%:48:1.2938E-5:44:11:6:5:24 0/1:41:11:5:6:31:35.48%:37:1.6659E-4:39:20:9:11:32 0/1:42:17:8:9:36:47.22%:61:6.3405E-7:41:19:10:9:36 0/1:42:10:6:4:21:47.62%:36:2.3971E-4:41:11:6:5:21 0/1:48:9:3:6:32:28.12%:29:1.0185E-3:42:23:10:13:32 0/1:43:12:9:3:32:37.5%:41:6.8751E-5:40:20:10:10:32 0/1:41:11:5:6:25:44%:39:1.1933E-4:44:14:5:9:26 0/1:41:22:10:12:37:59.46%:85:2.5665E-9:41:15:5:10:37 0/1:41:12:10:2:20:60%:46:2.2548E-5:48:8:2:6:21 0/1:40:9:5:4:14:64.29%:35:2.8986E-4:46:5:1:4:15 0/1:44:13:7:6:24:54.17%:48:1.2938E-5:43:11:3:8:24 0/1:43:9:5:4:18:50%:32:5.1645E-4:44:9:3:6:18 0/1:39:7:2:5:16:43.75%:24:3.3988E-3:55:9:6:3:16 0/1:45:11:5:6:33:33.33%:37:1.8019E-4:48:22:12:10:34 0/1:38:16:10:6:35:45.71%:57:1.637E-6:37:19:9:10:36 0/1:42:13:7:6:24:54.17%:48:1.2938E-5:38:11:5:6:24 0/1:42:15:6:9:42:35.71%:51:6.6622E-6:40:27:15:12:43 0/1:41:7:3:4:19:36.84%:23:3.9926E-3:44:12:6:6:19 0/1:41:13:8:5:33:39.39%:45:2.8029E-5:41:20:11:9:33 0/1:38:17:7:10:29:58.62%:65:2.627E-7:38:12:9:3:29 0/1:38:12:9:3:22:54.55%:45:3.066E-5:38:10:6:4:22 0/1:42:19:12:7:51:37.25%:66:2.4191E-7:43:32:19:13:52 0/1:39:13:6:7:24:54.17%:48:1.2938E-5:37:11:6:5:24 0/1:43:16:4:12:25:64%:63:4.1493E-7:41:9:6:3:26 0/1:38:17:6:11:31:54.84%:64:3.5853E-7:44:14:7:7:32 0/1:39:10:4:6:25:40%:34:3.1821E-4:43:15:8:7:26 0/1:38:13:5:8:26:50%:47:1.6379E-5:40:13:6:7:26 0/1:42:11:7:4:17:64.71%:43:4.3258E-5:43:6:4:2:17 0/1:44:10:5:5:25:40%:34:3.1821E-4:39:15:6:9:25 0/0:38:5:4:1:20:25%:10:2.3562E-2:47:15:4:11:20 0/1:44:13:6:7:31:41.94%:46:2.4825E-5:41:18:11:7:31 0/0:40:5:3:2:11:45.45%:3:1.7544E-2:41:6:2:4:12 0/1:43:14:5:9:30:46.67%:50:8.3837E-6:39:16:6:10:30 0/1:40:13:6:7:30:43.33%:46:2.3178E-5:41:17:7:10:30 0/1:43:13:6:7:44:29.55%:43:4.324E-5:40:31:21:10:44 0/1:37:7:3:4:17:41.18%:24:3.6151E-3:39:10:7:3:17 0/1:41:12:6:6:28:42.86%:42:5.4482E-5:39:16:11:5:28 0/1:42:11:7:4:37:29.73%:36:2.0455E-4:43:26:19:7:38 0/1:39:18:10:8:28:64.29%:72:6.1806E-8:37:10:8:2:28 0/1:40:14:8:6:31:45.16%:50:9.1194E-6:38:17:6:11:31 0/1:42:13:6:7:27:48.15%:47:1.81E-5:46:14:10:4:27 0/1:42:19:14:5:47:40.43%:67:1.9354E-7:42:28:14:14:47 0/1:37:10:6:4:22:45.45%:35:2.6061E-4:37:12:9:3:23 0/1:37:12:3:9:26:46.15%:43:4.6796E-5:37:14:6:8:26 0/1:41:6:2:4:17:35.29%:20:9.2021E-3:39:11:3:8:18 0/1:44:11:8:3:35:31.43%:37:1.9282E-4:46:24:10:14:35 0/1:42:15:5:10:34:44.12%:53:4.1835E-6:42:19:9:10:34 0/1:44:24:11:13:44:54.55%:91:7.4746E-10:43:20:13:7:45 0/1:42:28:13:15:40:70%:99:1.9197E-12:45:12:3:9:40 0/1:42:29:14:15:47:61.7%:99:3.0639E-12:40:18:9:9:47 0/1:40:21:11:10:43:48.84%:77:1.8298E-8:42:22:11:11:43 0/1:42:13:9:4:25:52%:48:1.4654E-5:41:12:8:4:25 0/1:40:8:3:5:20:40%:27:1.638E-3:37:12:6:6:21 0/1:44:24:12:12:38:63.16%:95:2.5665E-10:40:14:5:9:38 0/1:40:17:12:5:35:48.57%:62:5.7598E-7:34:18:8:10:36 0/1:37:17:9:8:32:53.12%:63:4.1013E-7:38:15:8:7:34 0/1:41:12:7:5:25:48%:43:4.2836E-5:41:13:7:6:28 0/1:41:15:9:6:32:46.88%:54:3.5464E-6:48:17:7:10:34 0/1:41:17:10:7:33:51.52%:63:4.6376E-7:38:16:11:5:33 0/1:42:18:10:8:35:51.43%:67:1.9562E-7:39:17:7:10:36 0/1:39:21:10:11:40:52.5%:78:1.2997E-8:42:19:7:12:40 0/1:41:14:7:7:29:48.28%:51:7.6466E-6:38:15:8:7:29 0/1:39:16:6:10:33:48.48%:58:1.364E-6:41:17:9:8:33 0/1:40:20:9:11:34:58.82%:77:1.6951E-8:37:14:5:9:37 0/1:42:13:9:4:29:44.83%:46:2.1506E-5:38:16:10:6:30 0/1:41:11:4:7:28:39.29%:38:1.4422E-4:41:17:6:11:28 0/1:38:17:13:4:30:56.67%:65:3.0928E-7:34:13:9:4:34 0/1:40:18:8:10:39:46.15%:65:2.9336E-7:40:21:10:11:41 0/1:38:22:16:6:32:68.75%:90:8.0292E-10:35:10:8:2:32 0/1:45:12:9:3:26:46.15%:43:4.6796E-5:40:14:13:1:26 0/1:41:8:4:4:18:44.44%:28:1.4461E-3:36:10:5:5:19 0/1:39:11:5:6:39:28.21%:36:2.1547E-4:38:28:17:11:39 0/1:40:15:9:6:39:38.46%:52:5.7558E-6:36:24:13:11:40 0/1:39:17:9:8:26:65.38%:68:1.4238E-7:41:9:6:3:26 0/1:39:15:10:5:30:50%:55:2.9161E-6:38:15:6:9:32 0/1:49:7:2:5:22:31.82%:23:4.4505E-3:40:15:8:7:22 0/1:40:15:8:7:33:45.45%:54:3.8647E-6:36:18:12:6:33 0/1:37:12:9:3:24:50%:44:3.8815E-5:38:12:9:3:24 0/1:40:11:6:5:30:36.67%:37:1.594E-4:39:19:12:7:30 0/1:44:18:11:7:29:62.07%:71:7.6888E-8:35:11:5:6:29 0/1:42:18:6:12:33:54.55%:68:1.5143E-7:44:15:7:8:33 0/1:38:9:5:4:16:56.25%:33:4.0786E-4:44:7:3:4:16 0/1:38:10:8:2:25:40%:34:3.1821E-4:41:15:6:9:27 0/1:44:23:14:9:34:67.65%:94:3.5675E-10:45:11:5:6:34 0/1:43:8:7:1:17:47.06%:28:1.3389E-3:46:9:3:6:17 0/1:40:14:5:9:20:70%:57:1.6702E-6:40:6:3:3:20 0/1:41:16:8:8:20:80%:71:7.7086E-8:35:4:2:2:20 0/1:44:22:11:11:39:56.41%:84:3.6006E-9:41:17:11:6:39 0/1:39:12:9:3:30:40%:42:6.1809E-5:42:18:9:9:31 0/1:37:8:4:4:23:34.78%:27:1.8791E-3:36:15:9:6:23 MTB_anc 338837 . C T . PASS AC=149;AF=0.497;AN=300;ANN=T|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.237G>A|p.Ala79Ala|237/2514|237/2514|79/837||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338837C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338837C>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:26:11:15:37:70.27%:99:1.294E-11:41:11:4:7:37 0/1:51:6:2:4:15:40%:20:8.4291E-3:44:9:6:3:16 0/1:46:41:19:22:61:67.21%:99:1.2248E-17:43:20:5:15:62 0/1:42:10:7:3:18:55.56%:37:1.7215E-4:38:8:6:2:18 0/1:41:13:5:8:24:54.17%:48:1.2938E-5:47:11:4:7:24 0/0:42:4:1:3:15:26.67%:8:4.9808E-2:43:11:4:7:16 0/1:44:19:12:7:38:50%:70:9.2415E-8:47:19:11:8:39 0/1:39:13:7:6:23:56.52%:49:1.1242E-5:43:10:4:6:23 0/1:42:14:5:9:26:53.85%:52:5.4595E-6:37:12:7:5:27 0/1:47:17:8:9:30:56.67%:65:3.0928E-7:47:13:7:6:31 0/1:44:11:5:6:33:33.33%:37:1.8019E-4:46:22:15:7:33 0/1:42:27:12:15:43:62.79%:99:1.6529E-11:44:16:10:6:45 0/1:44:7:3:4:13:53.85%:25:2.6087E-3:53:6:2:4:14 0/1:41:19:6:13:43:44.19%:68:1.4658E-7:40:24:13:11:45 0/1:42:9:5:4:22:40.91%:31:7.0165E-4:40:13:5:8:22 0/1:40:14:9:5:22:63.64%:55:2.7817E-6:42:8:3:5:24 0/1:41:10:4:6:17:58.82%:38:1.4831E-4:43:7:2:5:18 0/1:39:7:4:3:20:35%:23:4.158E-3:42:13:6:7:21 0/1:45:6:2:4:12:50%:21:6.865E-3:45:6:3:3:12 0/1:42:16:9:7:28:57.14%:61:7.3043E-7:45:12:5:7:28 0/1:40:13:5:8:35:37.14%:45:3.1103E-5:42:22:8:14:35 0/1:40:26:16:10:50:52%:97:1.7375E-10:42:24:9:15:50 0/1:43:13:6:7:24:54.17%:48:1.2938E-5:40:11:7:4:24 0/1:40:15:8:7:36:41.67%:53:4.8188E-6:43:21:12:9:37 0/1:41:14:7:7:27:51.85%:52:6.1806E-6:41:13:7:6:27 0/1:41:14:5:9:23:60.87%:54:3.4067E-6:36:9:6:3:23 0/1:42:13:7:6:24:54.17%:48:1.2938E-5:41:11:7:4:24 0/1:46:9:4:5:25:36%:30:8.1542E-4:44:16:7:9:25 0/1:46:11:5:6:30:36.67%:37:1.594E-4:44:19:12:7:32 0/1:42:20:10:10:40:50%:74:3.8991E-8:44:20:13:7:42 0/1:43:21:11:10:43:48.84%:77:1.8298E-8:38:22:6:16:43 0/1:40:18:10:8:39:46.15%:65:2.9336E-7:42:21:12:9:39 0/1:41:16:9:7:34:47.06%:58:1.4997E-6:45:18:7:11:34 0/1:41:13:8:5:30:43.33%:46:2.3178E-5:43:17:9:8:30 0/1:44:13:5:8:31:41.94%:46:2.4825E-5:40:18:11:7:34 0/1:41:18:12:6:37:48.65%:66:2.432E-7:43:19:10:9:37 0/1:44:20:10:10:41:48.78%:73:4.3347E-8:39:21:6:15:42 0/1:41:31:19:12:56:55.36%:99:1.3458E-12:42:25:12:13:57 0/1:43:24:13:11:46:52.17%:90:9.761E-10:50:22:9:13:46 0/1:43:24:14:10:46:52.17%:90:9.761E-10:45:22:11:11:46 0/1:41:22:13:9:41:53.66%:83:4.8137E-9:45:19:11:8:42 0/1:44:18:11:7:34:52.94%:67:1.7305E-7:46:16:7:9:35 0/1:38:15:7:8:29:51.72%:55:2.6068E-6:43:14:8:6:31 0/1:42:18:8:10:28:64.29%:72:6.1806E-8:44:10:7:3:29 0/1:42:17:5:12:50:34%:58:1.4808E-6:40:33:17:16:50 0/1:43:15:6:9:36:41.67%:53:4.8188E-6:40:21:11:10:36 0/1:39:9:4:5:26:34.62%:30:8.4928E-4:43:17:9:8:26 0/1:43:22:7:15:55:40%:77:1.7076E-8:41:33:23:10:56 0/1:43:29:13:16:51:56.86%:99:6.4161E-12:40:22:16:6:54 0/1:44:17:9:8:43:39.53%:59:1.0581E-6:45:26:12:14:43 0/1:41:6:5:1:13:46.15%:21:7.4534E-3:45:7:3:4:13 0/1:41:29:11:18:60:48.33%:99:2.0452E-11:41:31:16:15:64 0/1:41:12:7:5:23:52.17%:44:3.4748E-5:41:11:4:7:23 0/1:39:14:7:7:28:50%:51:6.911E-6:42:14:7:7:28 0/1:41:15:8:7:26:57.69%:57:1.7241E-6:41:11:5:6:27 0/1:40:21:7:14:46:45.65%:76:2.4256E-8:42:25:13:12:48 0/1:40:22:10:12:42:52.38%:82:5.4836E-9:40:20:11:9:43 0/1:42:17:9:8:37:45.95%:61:6.9312E-7:48:20:12:8:40 0/1:43:18:9:9:50:36%:62:5.8874E-7:46:32:22:10:50 0/1:41:17:6:11:28:60.71%:66:2.1913E-7:43:11:3:8:28 0/1:40:14:7:7:27:51.85%:52:6.1806E-6:44:13:7:6:28 0/1:40:19:8:11:44:43.18%:68:1.5811E-7:40:25:12:13:45 0/1:44:19:10:9:39:48.72%:69:1.0268E-7:42:20:11:9:40 0/1:41:15:9:6:30:50%:55:2.9161E-6:44:15:8:7:30 0/1:47:11:4:7:37:29.73%:36:2.0455E-4:43:26:11:15:37 0/1:46:16:11:5:41:39.02%:56:2.4696E-6:42:25:12:13:41 0/1:42:13:7:6:32:40.62%:45:2.6443E-5:42:19:7:12:33 0/1:43:29:15:14:48:60.42%:99:3.7531E-12:43:19:6:13:50 0/1:42:15:11:4:25:60%:58:1.4522E-6:50:10:3:7:26 0/1:47:11:5:6:20:55%:41:7.2653E-5:46:9:3:6:20 0/1:44:17:10:7:32:53.12%:63:4.1013E-7:40:15:5:10:32 0/1:43:11:7:4:23:47.83%:39:1.0135E-4:44:12:3:9:23 0/1:46:10:3:7:21:47.62%:36:2.3971E-4:51:11:8:3:21 0/1:45:12:5:7:39:30.77%:40:9.0046E-5:46:27:13:14:39 0/1:39:20:11:9:40:50%:74:3.8991E-8:38:20:9:11:41 0/1:43:15:8:7:28:53.57%:56:2.3037E-6:43:13:6:7:28 0/1:45:22:10:12:52:42.31%:78:1.4035E-8:41:30:17:13:53 0/1:44:13:6:7:28:46.43%:47:1.9812E-5:40:15:8:7:28 0/1:41:16:9:7:41:39.02%:56:2.4696E-6:42:25:14:11:42 0/1:45:20:7:13:34:58.82%:77:1.6951E-8:41:14:10:4:34 0/1:37:16:11:5:27:59.26%:62:6.1806E-7:39:11:6:5:27 0/1:43:25:16:9:58:43.1%:89:1.0786E-9:44:33:20:13:59 0/1:40:18:8:10:33:54.55%:68:1.5143E-7:39:15:6:9:35 0/1:41:21:7:14:30:70%:87:1.7919E-9:39:9:6:3:31 0/1:42:19:8:11:39:48.72%:69:1.0268E-7:46:20:10:10:40 0/1:36:12:6:6:30:40%:42:6.1809E-5:41:18:9:9:31 0/1:40:18:8:10:32:56.25%:68:1.3089E-7:41:14:6:8:34 0/1:40:13:8:5:20:65%:51:6.4422E-6:46:7:4:3:20 0/1:40:12:7:5:28:42.86%:42:5.4482E-5:43:16:7:9:29 0/1:36:8:6:2:24:33.33%:27:1.949E-3:47:16:4:12:24 0/1:45:15:7:8:34:44.12%:53:4.1835E-6:44:19:11:8:34 0/1:47:7:3:4:15:46.67%:25:3.1609E-3:45:8:3:5:16 0/1:41:17:7:10:35:48.57%:62:5.7598E-7:39:18:7:11:36 0/1:40:16:8:8:35:45.71%:57:1.637E-6:46:19:8:11:35 0/1:46:15:8:7:46:32.61%:51:7.8109E-6:40:31:21:10:46 0/1:44:10:5:5:23:43.48%:35:2.8066E-4:38:13:9:4:23 0/1:41:20:9:11:37:54.05%:75:2.7004E-8:40:17:11:6:38 0/1:45:17:8:9:44:38.64%:59:1.1194E-6:44:27:20:7:44 0/1:39:22:12:10:34:64.71%:88:1.3675E-9:38:12:9:3:34 0/1:40:20:11:9:37:54.05%:75:2.7004E-8:39:17:6:11:37 0/1:46:16:8:8:32:50%:59:1.2304E-6:47:16:10:6:32 0/1:40:23:15:8:54:42.59%:82:5.9704E-9:44:31:15:16:54 0/1:37:12:6:6:27:44.44%:42:5.0681E-5:38:15:10:5:29 0/1:39:19:6:13:36:52.78%:71:7.3012E-8:38:17:6:11:36 0/1:39:8:2:6:20:40%:27:1.638E-3:41:12:3:9:21 0/1:43:17:9:8:43:39.53%:59:1.0581E-6:44:26:11:15:43 0/1:44:16:6:10:37:43.24%:57:1.9143E-6:40:21:9:12:38 0/1:43:29:17:12:55:52.73%:99:1.1491E-11:46:26:16:10:56 0/1:43:32:16:16:44:72.73%:99:2.1273E-14:48:12:3:9:44 0/1:43:34:17:17:53:64.15%:99:1.8773E-14:42:19:10:9:54 0/1:41:25:14:11:51:49.02%:92:5.8079E-10:47:26:14:12:51 0/1:43:16:10:6:31:51.61%:59:1.0995E-6:41:15:10:5:31 0/1:40:11:5:6:23:47.83%:39:1.0135E-4:39:12:6:6:25 0/1:42:31:15:16:48:64.58%:99:2.9027E-13:44:17:6:11:50 0/1:40:17:13:4:35:48.57%:62:5.7598E-7:38:18:9:9:37 0/1:39:26:15:11:44:59.09%:99:7.0445E-11:37:18:12:6:47 0/1:41:20:14:6:35:57.14%:76:2.0063E-8:42:15:8:7:36 0/1:42:17:10:7:36:47.22%:61:6.3405E-7:49:19:9:10:37 0/1:42:18:12:6:34:52.94%:67:1.7305E-7:40:16:10:6:36 0/1:41:22:13:9:42:52.38%:82:5.4836E-9:40:20:9:11:42 0/1:39:23:11:12:42:54.76%:87:1.7689E-9:44:19:8:11:44 0/1:43:17:9:8:34:50%:62:5.1914E-7:39:17:10:7:36 0/1:39:21:10:11:42:50%:77:1.6451E-8:41:21:12:9:44 0/1:38:27:13:14:42:64.29%:99:1.3138E-11:37:15:6:9:43 0/1:41:13:9:4:32:40.62%:45:2.6443E-5:38:19:12:7:33 0/1:39:15:5:10:36:41.67%:53:4.8188E-6:42:21:5:16:37 0/1:38:23:18:5:40:57.5%:88:1.2989E-9:36:17:11:6:43 0/1:42:21:10:11:46:45.65%:76:2.4256E-8:41:25:11:14:46 0/1:38:26:16:10:39:66.67%:99:2.3331E-11:37:13:8:5:40 0/1:43:15:10:5:33:45.45%:54:3.8647E-6:40:18:16:2:34 0/1:44:9:4:5:21:42.86%:31:6.592E-4:37:12:7:5:21 0/1:42:13:7:6:39:33.33%:44:3.6837E-5:40:26:15:11:41 0/1:41:18:12:6:43:41.86%:63:3.9871E-7:39:25:13:12:44 0/1:40:22:13:9:33:66.67%:89:1.0623E-9:39:11:7:4:33 0/1:40:17:11:6:36:47.22%:61:6.3405E-7:39:19:9:10:36 0/1:48:10:4:6:27:37.04%:34:3.5253E-4:41:17:10:7:27 0/1:39:18:11:7:41:43.9%:64:3.454E-7:37:23:14:9:42 0/1:38:15:11:4:29:51.72%:55:2.6068E-6:38:14:11:3:29 0/1:41:11:7:4:31:35.48%:37:1.6659E-4:41:20:13:7:33 0/1:42:20:11:9:33:60.61%:78:1.4096E-8:36:13:6:7:33 0/1:40:19:6:13:35:54.29%:71:6.3952E-8:45:16:8:8:35 0/1:37:12:6:6:23:52.17%:44:3.4748E-5:43:11:6:5:23 0/1:38:14:11:3:30:46.67%:50:8.3837E-6:45:16:7:9:30 0/1:46:24:14:10:38:63.16%:95:2.5665E-10:45:14:6:8:38 0/1:41:10:7:3:21:47.62%:36:2.3971E-4:45:11:4:7:21 0/1:41:18:9:9:24:75%:77:1.8413E-8:41:6:3:3:25 0/1:41:15:8:7:20:75%:64:3.8543E-7:37:5:3:2:20 0/1:44:23:13:10:44:52.27%:86:2.3136E-9:41:21:13:8:46 0/1:41:15:11:4:34:44.12%:53:4.1835E-6:43:19:10:9:36 0/1:38:10:5:5:26:38.46%:34:3.3576E-4:38:16:10:6:26 MTB_anc 338844 . A G . PASS AC=147;AF=0.490;AN=300;ANN=G|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.230T>C|p.Val77Ala|230/2514|230/2514|77/837||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338844A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338844A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:41:12:5:7:39:30.77%:40:9.0046E-5:40:27:13:14:40 0/1:43:10:6:4:16:62.5%:39:1.2413E-4:52:6:2:4:16 0/1:45:20:5:15:61:32.79%:68:1.4773E-7:46:41:19:22:61 0/1:44:9:7:2:21:42.86%:31:6.592E-4:42:12:8:4:21 0/1:48:12:4:8:26:46.15%:43:4.6796E-5:41:14:5:9:26 0/1:41:12:5:7:17:70.59%:49:1.1285E-5:42:5:2:3:17 0/1:46:19:11:8:42:45.24%:68:1.3525E-7:44:23:14:9:43 0/1:45:11:4:7:24:45.83%:39:1.1047E-4:40:13:7:6:24 0/1:40:11:7:4:26:42.31%:38:1.2791E-4:41:15:6:9:28 0/1:45:15:8:7:34:44.12%:53:4.1835E-6:47:19:8:11:34 0/1:45:22:15:7:35:62.86%:87:1.7197E-9:46:13:5:8:35 0/1:45:16:10:6:45:35.56%:55:3.0122E-6:41:29:13:16:45 0/0:58:5:2:3:12:41.67%:3:1.8634E-2:42:7:3:4:14 0/1:40:25:14:11:51:49.02%:92:5.8079E-10:39:26:10:16:51 0/1:39:13:5:8:23:56.52%:49:1.1242E-5:44:10:6:4:23 0/1:42:9:3:6:25:36%:30:8.1542E-4:41:16:9:7:25 0/1:45:8:3:5:19:42.11%:28:1.5455E-3:40:11:5:6:19 0/1:43:14:6:8:21:66.67%:56:2.1998E-6:40:7:4:3:21 0/1:44:6:2:4:16:37.5%:20:8.837E-3:41:10:4:6:16 0/1:43:14:6:8:30:46.67%:50:8.3837E-6:43:16:9:7:30 0/1:42:22:8:14:36:61.11%:86:2.1194E-9:40:14:6:8:37 0/1:41:25:9:16:51:49.02%:92:5.8079E-10:43:26:16:10:51 0/1:41:11:7:4:25:44%:39:1.1933E-4:42:14:6:8:25 0/1:45:22:12:10:38:57.89%:85:3.0605E-9:41:16:9:7:38 0/1:41:13:7:6:27:48.15%:47:1.81E-5:42:14:7:7:27 0/1:36:8:5:3:24:33.33%:27:1.949E-3:40:16:6:10:25 0/1:41:11:8:3:24:45.83%:39:1.1047E-4:42:13:7:6:24 0/1:42:15:6:9:28:53.57%:56:2.3037E-6:47:13:6:7:28 0/1:42:22:13:9:34:64.71%:88:1.3675E-9:48:12:5:7:34 0/1:45:21:13:8:42:50%:77:1.6451E-8:43:21:10:11:42 0/1:41:22:6:16:44:50%:81:6.9407E-9:42:22:11:11:45 0/1:43:20:11:9:38:52.63%:75:3.0805E-8:39:18:10:8:40 0/1:48:18:7:11:34:52.94%:67:1.7305E-7:46:16:9:7:34 0/1:42:17:9:8:31:54.84%:64:3.5853E-7:40:14:8:6:32 0/1:41:19:11:8:35:54.29%:71:6.3952E-8:43:16:7:9:35 0/1:44:19:10:9:39:48.72%:69:1.0268E-7:41:20:12:8:39 0/1:40:21:6:15:43:48.84%:77:1.8298E-8:45:22:11:11:44 0/1:43:26:13:13:59:44.07%:93:4.2407E-10:42:33:19:14:59 0/1:50:22:9:13:45:48.89%:81:7.724E-9:44:23:13:10:46 0/1:45:24:12:12:49:48.98%:88:1.3761E-9:43:25:14:11:49 0/1:44:20:12:8:45:44.44%:72:6.2178E-8:41:25:13:12:47 0/1:45:16:7:9:35:45.71%:57:1.637E-6:43:19:11:8:35 0/1:44:13:7:6:31:41.94%:46:2.4825E-5:38:18:8:10:32 0/1:43:10:7:3:30:33.33%:33:3.9851E-4:42:20:8:12:30 0/1:41:33:17:16:49:67.35%:99:2.5436E-14:42:16:4:12:51 0/1:39:21:11:10:37:56.76%:80:8.5014E-9:42:16:7:9:38 0/1:42:17:9:8:27:62.96%:67:1.7891E-7:42:10:5:5:27 0/1:41:32:23:9:57:56.14%:99:4.883E-13:46:25:10:15:58 0/1:41:26:17:9:57:45.61%:94:3.594E-10:42:31:14:17:57 0/1:44:26:12:14:43:60.47%:99:5.8338E-11:46:17:9:8:43 0/1:46:7:3:4:14:50%:25:2.8986E-3:40:7:6:1:14 0/1:42:34:17:17:63:53.97%:99:1.1758E-13:40:29:11:18:65 0/1:39:13:5:8:25:52%:48:1.4654E-5:41:12:7:5:25 0/1:44:14:7:7:30:46.67%:50:8.3837E-6:41:16:8:8:30 0/1:45:10:5:5:28:35.71%:34:3.6855E-4:41:18:9:9:29 0/1:41:26:13:13:51:50.98%:97:1.9611E-10:40:25:9:16:52 0/1:43:20:11:9:44:45.45%:72:5.7286E-8:40:24:10:14:44 0/1:49:21:12:9:40:52.5%:78:1.2997E-8:42:19:10:9:40 0/1:46:32:22:10:52:61.54%:99:1.9712E-13:42:20:10:10:52 0/1:45:11:3:8:31:35.48%:37:1.6659E-4:44:20:9:11:32 0/1:44:13:7:6:27:48.15%:47:1.81E-5:41:14:8:6:28 0/1:41:25:12:13:44:56.82%:96:2.3358E-10:41:19:7:12:45 0/1:41:20:11:9:41:48.78%:73:4.3347E-8:42:21:11:10:42 0/1:44:15:8:7:30:50%:55:2.9161E-6:42:15:9:6:30 0/1:44:27:12:15:40:67.5%:99:7.8264E-12:48:13:5:8:41 0/1:42:25:12:13:41:60.98%:98:1.3631E-10:47:16:11:5:41 0/1:43:19:7:12:34:55.88%:72:5.5375E-8:43:15:7:8:34 0/1:42:20:6:14:52:38.46%:70:9.8643E-8:44:32:16:16:53 0/1:49:11:3:8:26:42.31%:38:1.2791E-4:44:15:11:4:26 0/1:46:9:3:6:20:45%:32:6.1425E-4:47:11:5:6:20 0/1:40:15:5:10:35:42.86%:53:4.5018E-6:46:20:12:8:36 0/1:45:12:3:9:25:48%:43:4.2836E-5:44:13:8:5:25 0/1:50:12:8:4:22:54.55%:45:3.066E-5:46:10:3:7:22 0/1:46:26:13:13:39:66.67%:99:2.3331E-11:44:13:6:7:40 0/1:38:19:9:10:40:47.5%:69:1.1326E-7:39:21:10:11:40 0/1:45:13:6:7:29:44.83%:46:2.1506E-5:42:16:8:8:29 0/1:40:30:16:14:55:54.55%:99:3.6885E-12:45:25:11:14:56 0/1:41:17:8:9:33:51.52%:63:4.6376E-7:44:16:8:8:33 0/1:43:23:13:10:39:58.97%:89:1.093E-9:41:16:9:7:41 0/1:43:14:10:4:35:40%:49:1.2005E-5:45:21:8:13:35 0/1:39:11:6:5:27:40.74%:38:1.362E-4:39:16:11:5:28 0/1:44:35:21:14:62:56.45%:99:3.1677E-14:44:27:18:9:65 0/1:40:17:8:9:36:47.22%:61:6.3405E-7:38:19:7:12:38 0/1:46:9:6:3:32:28.12%:29:1.0185E-3:41:23:8:15:32 0/1:46:20:10:10:39:51.28%:74:3.4806E-8:42:19:8:11:40 0/1:43:17:9:8:30:56.67%:65:3.0928E-7:38:13:6:7:32 0/1:42:14:6:8:34:41.18%:49:1.1295E-5:39:20:8:12:34 0/1:45:8:5:3:21:38.1%:27:1.7241E-3:41:13:8:5:21 0/1:41:17:8:9:30:56.67%:65:3.0928E-7:43:13:7:6:32 0/1:48:16:4:12:25:64%:63:4.1493E-7:40:9:7:2:25 0/1:44:21:12:9:37:56.76%:80:8.5014E-9:46:16:7:9:37 0/1:46:8:3:5:20:40%:27:1.638E-3:42:12:6:6:20 0/1:39:19:8:11:38:50%:70:9.2415E-8:42:19:8:11:39 0/1:45:19:8:11:36:52.78%:71:7.3012E-8:40:17:9:8:36 0/1:42:31:21:10:47:65.96%:99:2.2538E-13:47:16:8:8:48 0/1:39:13:9:4:23:56.52%:49:1.1242E-5:44:10:5:5:23 0/1:39:18:11:7:39:46.15%:65:2.9336E-7:41:21:10:11:40 0/1:44:28:21:7:45:62.22%:99:7.1237E-12:45:17:8:9:45 0/1:38:12:9:3:33:36.36%:41:7.2075E-5:40:21:10:11:35 0/1:41:17:6:11:37:45.95%:61:6.9312E-7:42:20:11:9:37 0/1:49:16:10:6:32:50%:59:1.2304E-6:46:16:8:8:32 0/1:45:31:15:16:56:55.36%:99:1.3458E-12:42:25:17:8:56 0/1:39:16:11:5:29:55.17%:60:8.4872E-7:38:13:7:6:29 0/1:38:18:6:12:37:48.65%:66:2.432E-7:38:19:6:13:39 0/1:42:12:3:9:20:60%:46:2.2548E-5:39:8:3:5:21 0/1:46:27:12:15:44:61.36%:99:2.0452E-11:45:17:9:8:44 0/1:39:21:8:13:39:53.85%:79:1.1402E-8:44:18:8:10:39 0/1:46:26:16:10:57:45.61%:94:3.594E-10:46:31:17:14:57 0/1:50:12:3:9:44:27.27%:39:1.027E-4:43:32:16:16:44 0/1:42:18:9:9:54:33.33%:61:6.9602E-7:43:36:17:19:54 0/1:46:27:14:13:52:51.92%:99:7.3303E-11:43:25:14:11:52 0/1:45:16:10:6:33:48.48%:58:1.364E-6:41:17:11:6:34 0/1:37:15:8:7:28:53.57%:56:2.3037E-6:41:13:5:8:28 0/1:44:18:6:12:51:35.29%:62:6.1577E-7:42:33:16:17:51 0/1:38:19:9:10:38:50%:70:9.2415E-8:39:19:14:5:38 0/1:37:20:12:8:46:43.48%:71:6.7171E-8:40:26:14:12:48 0/1:41:17:10:7:39:43.59%:60:8.1342E-7:40:22:14:8:39 0/1:47:22:10:12:40:55%:83:4.1855E-9:42:18:11:7:41 0/1:40:18:12:6:37:48.65%:66:2.432E-7:41:19:12:7:37 0/1:41:20:9:11:42:47.62%:73:4.7857E-8:41:22:12:10:42 0/1:42:21:8:13:43:48.84%:77:1.8298E-8:39:22:12:10:44 0/1:40:18:10:8:36:50%:66:2.1904E-7:42:18:9:9:37 0/1:42:21:12:9:45:46.67%:76:2.2206E-8:39:24:13:11:46 0/1:38:16:6:10:45:35.56%:55:3.0122E-6:38:29:14:15:45 0/1:40:21:13:8:35:60%:82:6.019E-9:39:14:9:5:35 0/1:40:22:6:16:37:59.46%:85:2.5665E-9:37:15:5:10:37 0/1:35:16:11:5:42:38.1%:55:2.607E-6:37:26:19:7:46 0/1:41:24:10:14:46:52.17%:90:9.761E-10:42:22:10:12:47 0/1:40:13:9:4:38:34.21%:44:3.5456E-5:39:25:17:8:41 0/1:40:17:15:2:32:53.12%:63:4.1013E-7:43:15:10:5:33 0/1:38:12:7:5:23:52.17%:44:3.4748E-5:40:11:5:6:23 0/1:40:26:15:11:41:63.41%:99:3.8262E-11:42:15:8:7:42 0/1:40:25:13:12:43:58.14%:97:1.977E-10:41:18:12:6:44 0/1:42:12:7:5:34:35.29%:41:7.5302E-5:40:22:13:9:35 0/1:38:18:9:9:36:50%:66:2.1904E-7:42:18:12:6:37 0/1:42:17:10:7:28:60.71%:66:2.1913E-7:47:11:4:7:28 0/1:37:24:14:10:42:57.14%:92:5.5097E-10:39:18:11:7:42 0/1:38:14:11:3:31:45.16%:50:9.1194E-6:40:17:12:5:31 0/1:41:21:14:7:34:61.76%:83:4.9442E-9:40:13:7:6:34 0/1:36:13:6:7:34:38.24%:45:2.9583E-5:43:21:11:10:34 0/1:45:16:8:8:36:44.44%:57:1.7753E-6:40:20:6:14:36 0/1:42:11:6:5:23:47.83%:39:1.0135E-4:37:12:7:5:23 0/1:46:16:7:9:30:53.33%:60:9.7202E-7:38:14:11:3:30 0/1:45:14:6:8:38:36.84%:48:1.407E-5:46:24:14:10:38 0/1:45:11:4:7:22:50%:40:9.1981E-5:41:11:7:4:22 0/0:41:6:3:3:25:24%:14:1.1145E-2:40:19:9:10:25 0/0:37:5:3:2:19:26.32%:10:2.3166E-2:43:14:7:7:19 0/1:43:21:13:8:47:44.68%:75:2.6363E-8:43:26:15:11:47 0/1:44:21:10:11:36:58.33%:81:7.2058E-9:40:15:11:4:36 0/1:38:16:10:6:26:61.54%:62:5.1256E-7:39:10:5:5:26 MTB_anc 338845 . C T . PASS AC=148;AF=0.493;AN=300;ANN=T|missense_variant|MODERATE|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.229G>A|p.Val77Met|229/2514|229/2514|77/837||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338845C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338845C>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:11:5:6:37:29.73%:36:2.0455E-4:40:26:13:13:39 0/1:42:10:6:4:16:62.5%:39:1.2413E-4:51:6:2:4:16 0/1:44:20:5:15:61:32.79%:68:1.4773E-7:46:41:19:22:61 0/1:43:9:7:2:21:42.86%:31:6.592E-4:43:12:8:4:21 0/1:45:12:4:8:26:46.15%:43:4.6796E-5:42:14:5:9:26 0/1:42:11:5:6:16:68.75%:44:3.3854E-5:41:5:2:3:17 0/1:46:19:11:8:41:46.34%:69:1.2413E-7:44:22:13:9:43 0/1:46:10:4:6:22:45.45%:35:2.6061E-4:40:12:6:6:24 0/1:38:12:7:5:28:42.86%:42:5.4482E-5:41:16:6:10:28 0/1:46:14:8:6:33:42.42%:49:1.0577E-5:47:19:8:11:34 0/1:46:22:15:7:35:62.86%:87:1.7197E-9:46:13:5:8:35 0/1:43:16:10:6:45:35.56%:55:3.0122E-6:42:29:13:16:45 0/1:52:6:2:4:13:46.15%:21:7.4534E-3:43:7:3:4:14 0/1:38:26:14:12:51:50.98%:97:1.9611E-10:40:25:9:16:53 0/1:39:13:5:8:23:56.52%:49:1.1242E-5:44:10:6:4:23 0/1:40:9:4:5:25:36%:30:8.1542E-4:41:16:9:7:26 0/1:43:8:3:5:19:42.11%:28:1.5455E-3:41:11:5:6:19 0/1:43:14:6:8:21:66.67%:56:2.1998E-6:39:7:4:3:21 0/1:44:6:2:4:15:40%:20:8.4291E-3:41:9:4:5:16 0/1:42:14:6:8:30:46.67%:50:8.3837E-6:44:16:9:7:31 0/1:41:22:8:14:36:61.11%:86:2.1194E-9:41:14:6:8:37 0/1:41:25:9:16:52:48.08%:91:6.4344E-10:43:27:17:10:52 0/1:41:9:7:2:23:39.13%:31:7.4174E-4:44:14:6:8:25 0/1:43:22:12:10:38:57.89%:85:3.0605E-9:41:16:9:7:38 0/1:40:13:7:6:27:48.15%:47:1.81E-5:42:14:7:7:27 0/1:37:8:6:2:24:33.33%:27:1.949E-3:41:16:6:10:25 0/1:38:10:8:2:22:45.45%:35:2.6061E-4:43:12:7:5:24 0/1:43:15:6:9:28:53.57%:56:2.3037E-6:47:13:6:7:28 0/1:42:20:12:8:31:64.52%:80:9.197E-9:49:11:4:7:33 0/1:44:21:13:8:42:50%:77:1.6451E-8:43:21:10:11:42 0/1:39:23:7:16:45:51.11%:85:2.6125E-9:43:22:11:11:46 0/1:42:21:12:9:38:55.26%:80:9.9016E-9:40:17:10:7:40 0/1:48:18:7:11:34:52.94%:67:1.7305E-7:46:16:9:7:34 0/1:42:16:9:7:31:51.61%:59:1.0995E-6:40:15:9:6:32 0/1:41:17:11:6:33:51.52%:63:4.6376E-7:42:16:7:9:35 0/1:44:19:10:9:39:48.72%:69:1.0268E-7:43:20:12:8:39 0/1:40:21:6:15:45:46.67%:76:2.2206E-8:44:24:12:12:45 0/1:42:26:13:13:60:43.33%:93:4.5813E-10:42:34:20:14:60 0/1:49:23:9:14:49:46.94%:84:3.9694E-9:43:26:14:12:49 0/1:45:23:11:12:48:47.92%:84:3.6075E-9:43:25:14:11:49 0/1:44:20:12:8:46:43.48%:71:6.7171E-8:42:26:14:12:47 0/1:47:15:7:8:34:44.12%:53:4.1835E-6:45:19:11:8:36 0/1:40:14:7:7:32:43.75%:50:9.8512E-6:38:18:8:10:32 0/1:42:9:6:3:29:31.03%:30:9.4048E-4:42:20:8:12:30 0/1:40:33:15:18:49:67.35%:99:2.5436E-14:42:16:4:12:52 0/1:39:20:11:9:37:54.05%:75:2.7004E-8:42:17:7:10:38 0/1:44:16:9:7:26:61.54%:62:5.1256E-7:42:10:5:5:27 0/1:42:31:23:8:56:55.36%:99:1.3458E-12:46:25:10:15:59 0/1:39:26:17:9:57:45.61%:94:3.594E-10:43:31:14:17:58 0/1:45:25:12:13:42:59.52%:97:1.6529E-10:48:17:9:8:43 0/1:46:7:3:4:14:50%:25:2.8986E-3:40:7:6:1:14 0/1:42:32:16:16:62:51.61%:99:9.798E-13:40:30:11:19:65 0/1:38:12:5:7:24:50%:44:3.8815E-5:41:12:7:5:25 0/1:44:14:7:7:30:46.67%:50:8.3837E-6:41:16:8:8:30 0/1:42:11:5:6:29:37.93%:38:1.5195E-4:42:18:9:9:29 0/1:40:26:13:13:50:52%:97:1.7375E-10:41:24:9:15:52 0/1:43:19:11:8:43:44.19%:68:1.4658E-7:42:24:10:14:44 0/1:47:22:13:9:40:55%:83:4.1855E-9:42:18:9:9:41 0/1:46:30:22:8:50:60%:99:1.6045E-12:43:20:10:10:53 0/1:45:11:3:8:32:34.38%:37:1.7351E-4:43:21:9:12:32 0/1:43:12:7:5:27:44.44%:42:5.0681E-5:41:15:9:6:28 0/1:41:23:12:11:43:53.49%:86:2.0322E-9:40:20:7:13:45 0/1:41:20:11:9:41:48.78%:73:4.3347E-8:44:21:11:10:42 0/1:45:14:8:6:29:48.28%:51:7.6466E-6:42:15:9:6:30 0/1:44:26:12:14:40:65%:99:3.0187E-11:45:14:5:9:41 0/1:41:25:12:13:41:60.98%:98:1.3631E-10:47:16:11:5:41 0/1:41:17:6:11:32:53.12%:63:4.1013E-7:43:15:7:8:34 0/1:41:21:7:14:53:39.62%:73:3.9927E-8:45:32:16:16:54 0/1:49:11:3:8:26:42.31%:38:1.2791E-4:45:15:11:4:26 0/1:43:9:3:6:21:42.86%:31:6.592E-4:46:12:5:7:21 0/1:40:14:5:9:35:40%:49:1.2005E-5:46:21:12:9:36 0/1:44:12:3:9:25:48%:43:4.2836E-5:44:13:8:5:25 0/1:49:12:8:4:22:54.55%:45:3.066E-5:46:10:3:7:22 0/1:45:26:12:14:39:66.67%:99:2.3331E-11:44:13:6:7:40 0/1:38:18:9:9:38:47.37%:65:2.68E-7:40:20:10:10:40 0/1:45:13:6:7:29:44.83%:46:2.1506E-5:43:16:8:8:30 0/1:40:30:17:13:55:54.55%:99:3.6885E-12:45:25:11:14:56 0/1:41:17:8:9:33:51.52%:63:4.6376E-7:43:16:8:8:33 0/1:42:24:13:11:42:57.14%:92:5.5097E-10:41:18:10:8:42 0/1:41:14:10:4:35:40%:49:1.2005E-5:47:21:8:13:35 0/1:39:11:6:5:27:40.74%:38:1.362E-4:38:16:11:5:27 0/1:43:37:23:14:65:56.92%:99:4.8389E-15:43:28:18:10:66 0/1:40:17:8:9:37:45.95%:61:6.9312E-7:39:20:8:12:38 0/1:46:9:6:3:33:27.27%:29:1.042E-3:41:24:9:15:33 0/1:47:20:10:10:39:51.28%:74:3.4806E-8:42:19:8:11:40 0/1:43:18:9:9:31:58.06%:69:1.1154E-7:39:13:6:7:32 0/1:41:14:6:8:34:41.18%:49:1.1295E-5:39:20:8:12:34 0/1:45:8:5:3:21:38.1%:27:1.7241E-3:41:13:8:5:21 0/1:41:18:8:10:31:58.06%:69:1.1154E-7:43:13:7:6:32 0/1:49:16:4:12:25:64%:63:4.1493E-7:40:9:7:2:25 0/1:42:20:12:8:36:55.56%:76:2.3419E-8:46:16:7:9:37 0/1:43:8:3:5:19:42.11%:28:1.5455E-3:43:11:5:6:20 0/1:38:17:6:11:36:47.22%:61:6.3405E-7:42:19:8:11:39 0/1:45:19:8:11:36:52.78%:71:7.3012E-8:40:17:9:8:36 0/1:41:31:21:10:48:64.58%:99:2.9027E-13:46:17:9:8:49 0/1:37:13:10:3:23:56.52%:49:1.1242E-5:44:10:5:5:24 0/1:39:17:10:7:40:42.5%:60:8.743E-7:41:23:11:12:41 0/1:44:28:21:7:44:63.64%:99:5.6997E-12:46:16:8:8:45 0/1:38:12:9:3:35:34.29%:41:7.8434E-5:40:23:12:11:35 0/1:41:17:6:11:37:45.95%:61:6.9312E-7:42:20:11:9:37 0/1:49:15:9:6:31:48.39%:54:3.2298E-6:47:16:8:8:32 0/1:44:29:15:14:54:53.7%:99:1.0051E-11:41:25:17:8:56 0/1:38:16:11:5:30:53.33%:60:9.7202E-7:38:14:7:7:30 0/1:38:15:4:11:35:42.86%:53:4.5018E-6:38:20:6:14:40 0/1:42:12:3:9:21:57.14%:45:2.658E-5:38:9:3:6:21 0/1:46:25:12:13:42:59.52%:97:1.6529E-10:44:17:9:8:44 0/1:39:20:7:13:38:52.63%:75:3.0805E-8:44:18:8:10:39 0/1:46:26:16:10:57:45.61%:94:3.594E-10:45:31:17:14:57 0/1:47:12:3:9:45:26.67%:39:1.05E-4:44:33:16:17:46 0/1:41:18:9:9:54:33.33%:61:6.9602E-7:44:36:17:19:54 0/1:46:26:13:13:51:50.98%:97:1.9611E-10:43:25:14:11:51 0/1:42:15:9:6:32:46.88%:54:3.5464E-6:43:17:11:6:34 0/1:34:14:7:7:27:51.85%:52:6.1806E-6:42:13:5:8:28 0/1:43:18:6:12:51:35.29%:62:6.1577E-7:43:33:16:17:52 0/1:37:19:9:10:38:50%:70:9.2415E-8:39:19:14:5:38 0/1:38:16:10:6:44:36.36%:55:2.8784E-6:39:28:15:13:48 0/1:39:17:10:7:39:43.59%:60:8.1342E-7:41:22:15:7:40 0/1:43:21:11:10:39:53.85%:79:1.1402E-8:42:18:11:7:41 0/1:40:17:12:5:36:47.22%:61:6.3405E-7:42:19:12:7:37 0/1:40:20:9:11:42:47.62%:73:4.7857E-8:41:22:12:10:42 0/1:42:21:8:13:44:47.73%:76:2.0219E-8:39:23:12:11:45 0/1:38:17:10:7:36:47.22%:61:6.3405E-7:43:19:9:10:37 0/1:41:20:12:8:45:44.44%:72:6.2178E-8:39:25:13:12:46 0/1:36:16:6:10:44:36.36%:55:2.8784E-6:39:28:14:14:45 0/1:40:20:13:7:34:58.82%:77:1.6951E-8:41:14:9:5:35 0/1:39:22:7:15:37:59.46%:85:2.5665E-9:38:15:5:10:38 0/1:35:17:11:6:44:38.64%:59:1.1194E-6:37:27:20:7:46 0/1:40:25:11:14:47:53.19%:94:3.621E-10:41:22:10:12:47 0/1:40:12:9:3:40:30%:40:9.2733E-5:37:28:17:11:42 0/1:40:17:15:2:31:54.84%:64:3.5853E-7:44:14:10:4:33 0/1:37:12:7:5:23:52.17%:44:3.4748E-5:42:11:5:6:23 0/1:39:26:15:11:40:65%:99:3.0187E-11:42:14:7:7:42 0/1:39:25:13:12:43:58.14%:97:1.977E-10:42:18:12:6:44 0/1:40:12:7:5:34:35.29%:41:7.5302E-5:41:22:12:10:35 0/1:37:18:9:9:36:50%:66:2.1904E-7:41:18:12:6:37 0/1:42:17:10:7:28:60.71%:66:2.1913E-7:47:11:4:7:28 0/1:37:22:13:9:40:55%:83:4.1855E-9:40:18:11:7:42 0/1:38:14:11:3:31:45.16%:50:9.1194E-6:40:17:12:5:31 0/1:40:21:14:7:33:63.64%:83:3.9837E-9:41:12:7:5:34 0/1:36:13:6:7:34:38.24%:45:2.9583E-5:44:21:11:10:34 0/1:45:16:8:8:37:43.24%:57:1.9143E-6:40:21:6:15:37 0/1:42:11:6:5:23:47.83%:39:1.0135E-4:37:12:7:5:23 0/1:45:16:7:9:29:55.17%:60:8.4872E-7:39:13:10:3:30 0/1:44:14:6:8:38:36.84%:48:1.407E-5:46:24:14:10:38 0/1:43:11:4:7:22:50%:40:9.1981E-5:41:11:7:4:22 0/0:41:6:3:3:24:25%:11:1.0968E-2:41:18:9:9:25 0/0:37:5:3:2:18:27.78%:8:2.2727E-2:46:13:7:6:19 0/1:42:21:13:8:46:45.65%:76:2.4256E-8:43:25:15:10:48 0/1:43:21:10:11:36:58.33%:81:7.2058E-9:41:15:11:4:36 0/1:36:14:10:4:24:58.33%:53:4.0663E-6:40:10:5:5:26 MTB_anc 338876 . G A . PASS AC=149;AF=0.497;AN=300;ANN=A|synonymous_variant|LOW|PE_PGRS4_Rv0279c|gene290|transcript|Transcript_gene290|Coding|1/1|c.198C>T|p.Ser66Ser|198/2514|198/2514|66/837||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.338876G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.338876G>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:14:6:8:45:31.11%:47:1.8462E-5:41:31:15:16:48 0/1:47:18:13:5:28:64.29%:72:6.1806E-8:49:10:5:5:28 0/1:48:22:6:16:65:33.85%:75:2.7963E-8:45:43:21:22:66 0/1:43:11:9:2:29:37.93%:38:1.5195E-4:42:18:12:6:30 0/1:52:12:4:8:28:42.86%:42:5.4482E-5:40:16:5:11:29 0/1:40:17:6:11:27:62.96%:67:1.7891E-7:40:10:4:6:27 0/1:49:22:13:9:53:41.51%:78:1.5031E-8:44:31:18:13:53 0/1:48:13:6:7:26:50%:47:1.6379E-5:38:13:7:6:27 0/1:43:14:8:6:38:36.84%:48:1.407E-5:43:24:8:16:39 0/1:46:18:9:9:42:42.86%:64:3.7193E-7:46:24:10:14:43 0/1:48:23:16:7:38:60.53%:90:9.0682E-10:48:15:7:8:40 0/1:43:18:12:6:51:35.29%:62:6.1577E-7:43:33:14:19:51 0/1:46:9:4:5:18:50%:32:5.1645E-4:40:9:3:6:18 0/1:42:29:15:14:57:50.88%:99:1.4722E-11:41:28:11:17:57 0/1:43:17:8:9:31:54.84%:64:3.5853E-7:42:14:9:5:31 0/1:44:17:7:10:34:50%:62:5.1914E-7:41:17:10:7:34 0/1:45:9:3:6:21:42.86%:31:6.592E-4:45:12:5:7:21 0/1:42:19:7:12:28:67.86%:77:1.6265E-8:39:9:5:4:28 0/1:51:8:2:6:20:40%:27:1.638E-3:39:12:4:8:20 0/1:46:17:7:10:38:44.74%:61:7.5297E-7:44:21:12:9:39 0/1:42:27:10:17:48:56.25%:99:4.1928E-11:41:21:11:10:48 0/1:44:26:9:17:55:47.27%:95:2.9965E-10:44:29:17:12:60 0/1:46:15:9:6:30:50%:55:2.9161E-6:42:15:6:9:31 0/1:45:23:12:11:40:57.5%:88:1.2989E-9:42:17:10:7:41 0/1:43:18:9:9:40:45%:64:3.1919E-7:43:22:12:10:40 0/1:37:9:6:3:28:32.14%:30:9.1169E-4:45:19:7:12:28 0/1:40:13:9:4:27:48.15%:47:1.81E-5:43:14:8:6:28 0/1:44:21:7:14:36:58.33%:81:7.2058E-9:45:15:7:8:36 0/1:42:25:14:11:39:64.1%:99:8.8326E-11:48:14:5:9:39 0/1:48:21:13:8:44:47.73%:76:2.0219E-8:43:23:12:11:45 0/1:40:23:7:16:46:50%:85:2.9283E-9:43:23:11:12:49 0/1:42:26:13:13:51:50.98%:97:1.9611E-10:38:25:14:11:51 0/1:46:23:10:13:45:51.11%:85:2.6125E-9:47:22:13:9:45 0/1:41:16:10:6:32:50%:59:1.2304E-6:45:16:9:7:34 0/1:44:21:12:9:43:48.84%:77:1.8298E-8:45:22:10:12:45 0/1:42:26:13:13:49:53.06%:98:1.5284E-10:41:23:15:8:49 0/1:40:23:8:15:46:50%:85:2.9283E-9:46:23:12:11:46 0/1:43:29:15:14:72:40.28%:99:5.3416E-11:43:43:26:17:73 0/1:47:31:13:18:62:50%:99:2.9394E-12:42:31:15:16:63 0/1:45:24:12:12:59:40.68%:85:3.1153E-9:44:35:19:16:63 0/1:43:22:11:11:51:43.14%:78:1.3059E-8:44:29:15:14:52 0/1:44:23:11:12:44:52.27%:86:2.3136E-9:43:21:11:10:45 0/1:40:18:9:9:40:45%:64:3.1919E-7:39:22:11:11:42 0/1:42:14:8:6:36:38.89%:48:1.2704E-5:43:22:8:14:37 0/1:43:40:21:19:59:67.8%:99:2.756E-17:43:19:7:12:60 0/1:40:22:11:11:48:45.83%:79:1.0268E-8:41:26:13:13:49 0/1:40:26:11:15:38:68.42%:99:1.7613E-11:40:12:7:5:38 0/1:41:37:24:13:69:53.62%:99:8.8612E-15:46:32:14:18:72 0/1:43:30:20:10:68:44.12%:99:1.4855E-11:44:38:19:19:68 0/1:43:31:13:18:53:58.49%:99:8.2315E-13:47:22:12:10:54 0/1:45:8:5:3:18:44.44%:28:1.4461E-3:40:10:9:1:19 0/1:42:40:21:19:72:55.56%:99:4.3182E-16:39:32:12:20:74 0/1:45:13:5:8:27:48.15%:47:1.81E-5:47:14:8:6:27 0/1:44:18:9:9:36:50%:66:2.1904E-7:40:18:8:10:36 0/1:44:14:7:7:38:36.84%:48:1.407E-5:42:24:14:10:38 0/1:45:28:13:15:62:45.16%:99:7.0184E-11:40:34:13:21:65 0/1:47:26:16:10:51:50.98%:97:1.9611E-10:42:25:9:16:53 0/1:47:23:13:10:43:53.49%:86:2.0322E-9:42:20:12:8:43 0/1:46:38:25:13:66:57.58%:99:1.7361E-15:41:28:13:15:66 0/1:44:13:4:9:38:34.21%:44:3.5456E-5:44:25:11:14:39 0/1:44:15:9:6:35:42.86%:53:4.5018E-6:43:20:11:9:35 0/1:42:25:14:11:47:53.19%:94:3.621E-10:43:22:8:14:49 0/1:41:22:13:9:45:48.89%:81:7.724E-9:43:23:11:12:48 0/1:48:20:10:10:36:55.56%:76:2.3419E-8:41:16:10:6:36 0/1:48:31:14:17:50:62%:99:4.5844E-13:44:19:10:9:51 0/1:42:32:17:15:52:61.54%:99:1.9712E-13:45:20:13:7:52 0/1:43:21:7:14:43:48.84%:77:1.8298E-8:42:22:13:9:43 0/1:46:27:10:17:64:42.19%:96:2.2534E-10:45:37:17:20:65 0/1:52:13:3:10:35:37.14%:45:3.1103E-5:42:22:14:8:35 0/1:42:8:2:6:26:30.77%:26:2.076E-3:46:18:10:8:27 0/1:43:18:7:11:41:43.9%:64:3.454E-7:48:23:13:10:41 0/1:45:14:5:9:31:45.16%:50:9.1194E-6:45:17:9:8:31 0/1:46:15:9:6:25:60%:58:1.4522E-6:51:10:3:7:25 0/1:48:32:17:15:49:65.31%:99:9.8751E-14:45:17:8:9:49 0/1:38:22:12:10:50:44%:79:1.2104E-8:42:28:12:16:52 0/1:43:18:8:10:41:43.9%:64:3.454E-7:41:23:11:12:42 0/1:42:34:18:16:65:52.31%:99:1.5381E-13:44:31:17:14:67 0/1:43:20:10:10:39:51.28%:74:3.4806E-8:42:19:10:9:39 0/1:44:30:16:14:52:57.69%:99:2.3048E-12:40:22:13:9:53 0/1:42:18:11:7:44:40.91%:63:4.2568E-7:45:26:10:16:44 0/1:40:14:8:6:36:38.89%:48:1.2704E-5:37:22:14:8:36 0/1:42:42:24:18:71:59.15%:99:3.3305E-17:44:29:19:10:73 0/1:41:21:11:10:46:45.65%:76:2.4256E-8:40:25:11:14:46 0/1:43:14:8:6:40:35%:48:1.5388E-5:42:26:12:14:40 0/1:46:22:11:11:46:47.83%:80:8.5409E-9:42:24:9:15:47 0/1:41:19:10:9:35:54.29%:71:6.3952E-8:39:16:8:8:36 0/1:46:18:8:10:39:46.15%:65:2.9336E-7:43:21:9:12:40 0/1:40:10:8:2:27:37.04%:34:3.5253E-4:40:17:10:7:29 0/1:40:19:8:11:38:50%:70:9.2415E-8:41:19:9:10:39 0/1:46:19:7:12:30:63.33%:75:2.6715E-8:45:11:8:3:30 0/1:45:26:14:12:44:59.09%:99:7.0445E-11:47:18:8:10:44 0/1:43:9:3:6:24:37.5%:31:7.7962E-4:46:15:8:7:24 0/1:37:25:11:14:49:51.02%:93:4.6489E-10:38:24:9:15:49 0/1:45:24:13:11:43:55.81%:91:6.4513E-10:42:19:10:9:43 0/1:41:36:25:11:57:63.16%:99:3.5316E-15:47:21:11:10:57 0/1:43:15:10:5:29:51.72%:55:2.6068E-6:42:14:8:6:30 0/1:40:21:13:8:48:43.75%:75:2.8521E-8:39:27:14:13:50 0/1:43:32:23:9:51:62.75%:99:1.5887E-13:48:19:9:10:51 0/1:39:19:11:8:49:38.78%:66:2.1763E-7:41:30:18:12:50 0/1:42:21:7:14:48:43.75%:75:2.8521E-8:43:27:15:12:49 0/1:49:18:11:7:39:46.15%:65:2.9336E-7:44:21:11:10:39 0/1:44:34:17:17:64:53.12%:99:1.3489E-13:40:30:18:12:66 0/1:39:21:14:7:39:53.85%:79:1.1402E-8:40:18:10:8:40 0/1:44:18:7:11:44:40.91%:63:4.2568E-7:40:26:9:17:45 0/1:42:11:4:7:24:45.83%:39:1.1047E-4:39:13:7:6:26 0/1:47:28:14:14:49:57.14%:99:1.5129E-11:46:21:9:12:49 0/1:41:25:10:15:45:55.56%:95:2.7295E-10:45:20:9:11:46 0/1:47:29:16:13:62:46.77%:99:2.4857E-11:44:33:18:15:63 0/1:46:18:6:12:55:32.73%:61:7.2242E-7:43:37:19:18:55 0/1:43:24:12:12:62:38.71%:84:3.7283E-9:44:38:18:20:64 0/1:44:32:17:15:61:52.46%:99:8.637E-13:43:29:16:13:61 0/1:44:21:11:10:44:47.73%:76:2.0219E-8:40:23:13:10:46 0/1:39:16:9:7:31:51.61%:59:1.0995E-6:41:15:7:8:35 0/1:42:20:7:13:57:35.09%:69:1.2588E-7:43:37:18:19:57 0/1:39:23:13:10:47:48.94%:84:3.2602E-9:40:24:17:7:47 0/1:39:24:14:10:56:42.86%:85:2.5383E-9:39:32:17:15:58 0/1:41:19:12:7:45:42.22%:67:1.6979E-7:39:26:16:10:46 0/1:42:25:11:14:47:53.19%:94:3.621E-10:42:22:13:9:48 0/1:39:20:14:6:40:50%:74:3.8991E-8:42:20:13:7:40 0/1:45:20:8:12:49:40.82%:70:8.2643E-8:41:29:17:12:50 0/1:46:24:8:16:53:45.28%:86:2.005E-9:40:29:15:14:54 0/1:41:20:11:9:39:51.28%:74:3.4806E-8:42:19:10:9:40 0/1:40:27:14:13:53:50.94%:99:8.2728E-11:40:26:13:13:54 0/1:38:18:8:10:46:39.13%:63:4.7997E-7:41:28:13:15:47 0/1:40:20:13:7:34:58.82%:77:1.6951E-8:39:14:9:5:38 0/1:40:27:12:15:45:60%:99:2.4933E-11:41:18:7:11:47 0/1:36:20:14:6:51:39.22%:70:9.3266E-8:38:31:22:9:52 0/1:42:26:11:15:53:49.06%:96:2.4512E-10:41:27:15:12:54 0/1:40:17:11:6:48:35.42%:58:1.3619E-6:37:31:19:12:52 0/1:40:20:18:2:38:52.63%:75:3.0805E-8:43:18:11:7:38 0/1:37:16:8:8:32:50%:59:1.2304E-6:40:16:5:11:32 0/1:41:32:17:15:53:60.38%:99:2.4146E-13:40:21:13:8:55 0/1:39:32:17:15:49:65.31%:99:9.8751E-14:42:17:9:8:50 0/1:41:16:9:7:48:33.33%:54:3.4048E-6:42:32:18:14:50 0/1:39:23:14:9:44:52.27%:86:2.3136E-9:40:21:14:7:46 0/1:40:20:11:9:35:57.14%:76:2.0063E-8:44:15:7:8:35 0/1:39:25:15:10:48:52.08%:93:4.1182E-10:37:23:14:9:48 0/1:39:21:14:7:42:50%:77:1.6451E-8:40:21:14:7:42 0/1:41:24:15:9:40:60%:94:3.8741E-10:40:16:9:7:42 0/1:37:13:7:6:36:36.11%:44:3.2589E-5:41:23:13:10:37 0/1:45:22:12:10:44:50%:81:6.9407E-9:42:22:8:14:45 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/1:48:17:7:10:32:53.12%:63:4.1013E-7:37:15:11:4:33 0/1:44:16:8:8:47:34.04%:54:3.2755E-6:44:31:18:13:47 0/1:43:13:4:9:27:48.15%:47:1.81E-5:39:14:9:5:27 0/1:45:9:4:5:31:29.03%:30:9.9376E-4:39:22:11:11:31 0/1:38:9:4:5:25:36%:30:8.1542E-4:43:16:8:8:26 0/1:41:26:14:12:57:45.61%:94:3.594E-10:44:31:17:14:58 0/1:42:24:12:12:40:60%:94:3.8741E-10:42:16:11:5:41 0/1:40:18:11:7:30:60%:70:9.3503E-8:39:12:6:6:32 MTB_anc 340395 . G A . PASS AC=68;AF=0.236;AN=288;ANN=A|missense_variant|MODERATE|PPE3_Rv0280|gene291|transcript|Transcript_gene291|Coding|1/1|c.1032G>A|p.Met344Ile|1032/1611|1032/1611|344/536||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.340395G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.340395G>A||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:21:0%:40:1E0:35:21:14:7:23 0/0:0:0:0:0:10:0%:17:1E0:35:10:8:2:10 1/1:36:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 0/0:0:0:0:0:11:0%:22:1E0:35:11:8:3:12 0/0:0:0:0:0:14:0%:25:1E0:36:14:8:6:16 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:20 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:18 1/1:35:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:15:0%:29:1E0:35:15:8:7:15 0/0:34:1:0:1:16:6.25%:21:5E-1:36:15:9:6:19 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:11 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:12 0/0:0:0:0:0:15:0%:29:1E0:35:15:11:4:18 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:21 1/1:34:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:11:0%:22:1E0:34:11:7:4:13 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:7 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 1/1:34:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:20:0%:36:1E0:35:20:12:8:23 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:8 0/0:33:1:0:1:12:8.33%:14:5E-1:35:11:6:5:13 0/0:0:0:0:0:22:0%:40:1E0:38:22:15:7:23 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:21 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:11 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:23 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:28 0/0:0:0:0:0:20:0%:36:1E0:35:20:9:11:21 0/0:0:0:0:0:20:0%:36:1E0:33:20:18:2:23 1/1:35:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:17:8:9:18:94.44%:86:2.0936E-9:32:1:1:0:18 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:11 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:20 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:21 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:21 1/1:35:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:24:0%:44:1E0:35:24:12:12:25 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:36 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:19 0/0:0:0:0:0:12:0%:21:1E0:36:12:9:3:12 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:22 0/0:0:0:0:0:12:0%:21:1E0:35:12:8:4:12 0/0:0:0:0:0:27:0%:52:1E0:36:27:17:10:30 1/1:35:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:36:25:12:13:26 0/0:0:0:0:0:31:0%:59:1E0:35:31:17:14:32 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:22:0%:40:1E0:36:22:15:7:22 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:37:11:6:5:14 0/0:0:0:0:0:17:0%:33:1E0:34:17:11:6:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:23 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:15:0%:29:1E0:36:15:12:3:17 0/0:0:0:0:0:18:0%:32:1E0:36:18:13:5:20 0/0:0:0:0:0:13:0%:25:1E0:35:13:7:6:13 0/0:38:1:1:0:21:4.76%:31:5E-1:33:20:15:5:21 0/0:0:0:0:0:17:0%:33:1E0:35:17:11:6:20 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:20 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:14 0/0:0:0:0:0:24:0%:44:1E0:34:24:12:12:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:16 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:21 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:8:0%:14:1E0:38:8:6:2:9 0/0:0:0:0:0:10:0%:17:1E0:35:10:6:4:11 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:22 0/0:0:0:0:0:19:0%:37:1E0:36:19:8:11:19 0/0:0:0:0:0:20:0%:36:1E0:36:20:16:4:21 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:16:0%:29:1E0:35:16:9:7:18 0/0:0:0:0:0:29:0%:55:1E0:36:29:15:14:31 0/0:0:0:0:0:25:0%:48:1E0:35:25:14:11:29 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:21:0%:40:1E0:34:21:13:8:21 1/1:36:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:11 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:9 0/0:0:0:0:0:14:0%:25:1E0:34:14:11:3:16 0/0:0:0:0:0:12:0%:21:1E0:35:12:8:4:14 0/0:0:0:0:0:22:0%:40:1E0:35:22:12:10:24 0/0:0:0:0:0:10:0%:17:1E0:34:10:4:6:12 0/0:0:0:0:0:25:0%:48:1E0:35:25:14:11:26 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:9 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:16 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:17 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:14 0/0:0:0:0:0:26:0%:47:1E0:36:26:18:8:26 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:21 0/0:0:0:0:0:9:0%:18:1E0:33:9:4:5:11 0/0:0:0:0:0:17:0%:33:1E0:35:17:7:10:19 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:10:0%:17:1E0:39:10:2:8:11 0/0:0:0:0:0:20:0%:36:1E0:35:20:9:11:20 0/0:0:0:0:0:16:0%:29:1E0:34:16:11:5:17 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:20 0/0:0:0:0:0:34:0%:62:1E0:36:34:28:6:34 0/0:0:0:0:0:17:0%:33:1E0:34:17:9:8:17 0/0:0:0:0:0:23:0%:44:1E0:35:23:14:9:24 1/1:33:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:18:0%:32:1E0:35:18:12:6:19 1/1:33:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:22 0/0:0:0:0:0:11:0%:22:1E0:33:11:6:5:12 0/0:0:0:0:0:17:0%:33:1E0:36:17:10:7:18 0/0:0:0:0:0:30:0%:55:1E0:35:30:21:9:32 0/0:0:0:0:0:23:0%:44:1E0:35:23:14:9:24 0/0:0:0:0:0:19:0%:37:1E0:34:19:8:11:20 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:19 1/1:34:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:35:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:34:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:13:0%:25:1E0:35:13:4:9:16 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:10 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 0/0:0:0:0:0:10:0%:17:1E0:34:10:4:6:12 0/0:0:0:0:0:8:0%:14:1E0:34:8:3:5:11 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:10 0/0:0:0:0:0:8:0%:14:1E0:35:8:1:7:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:11 0/0:34:1:0:1:19:5.26%:28:5E-1:36:18:6:12:21 0/0:37:1:0:1:7:14.29%:8:5E-1:36:6:4:2:7 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:16:0%:29:1E0:33:16:13:3:20 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 0/0:0:0:0:0:14:0%:25:1E0:34:14:11:3:16 0/0:0:0:0:0:20:0%:36:1E0:35:20:15:5:21 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:16 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:9 MTB_anc 342146 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|eccA3_Rv0282|gene293|transcript|Transcript_gene293|Coding|1/1|c.17C>A|p.Ala6Glu|17/1896|17/1896|6/631||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.342146C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.342146C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:49:35:16:19:36:97.22%:99:8.3613E-20:39:1:0:1:37 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:54:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:66:29:37:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:47:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:52:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:53:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:44:29:15:45:97.78%:99:4.4304E-25:37:1:1:0:47 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:38:19:19:39:97.44%:99:1.4508E-22:0:0:0:0:41 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:68:35:33:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:63:36:27:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:41 MTB_anc 342148 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|eccA3_Rv0282|gene293|transcript|Transcript_gene293|Coding|1/1|c.19G>A|p.Gly7Arg|19/1896|19/1896|7/631||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.342148G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.342148G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:44:46:28:18:46 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:51:0%:97:1E0:45:51:22:29:53 0/0:0:0:0:0:36:0%:66:1E0:49:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:54:25:16:9:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:20:10:30 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:38 0/0:0:0:0:0:47:0%:89:1E0:47:47:27:20:47 0/0:0:0:0:0:17:0%:33:1E0:52:17:7:10:17 0/0:0:0:0:0:48:0%:89:1E0:47:48:31:17:48 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:37 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:37 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:55:0%:99:1E0:44:55:34:21:56 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:51:30:18:12:30 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:46 0/0:0:0:0:0:28:0%:51:1E0:49:28:10:18:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:24 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:48:38:28:10:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:36:0%:66:1E0:48:36:21:15:37 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:67:0%:99:1E0:48:67:29:38:67 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:55:0%:99:1E0:44:55:35:20:55 0/0:0:0:0:0:44:0%:81:1E0:46:44:25:19:44 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:23:12:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:38 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:37 0/0:0:0:0:0:53:0%:99:1E0:47:53:24:29:53 0/0:60:1:1:0:46:2.17%:73:5E-1:47:45:20:25:46 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:24 0/0:60:1:1:0:40:2.5%:62:5E-1:41:39:23:16:42 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:37 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:50 0/0:0:0:0:0:45:0%:85:1E0:46:45:21:24:45 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:28 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:40:0%:74:1E0:49:40:20:20:40 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:26 0/0:0:0:0:0:51:0%:97:1E0:45:51:22:29:51 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:21:10:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:55:0%:99:1E0:46:55:30:25:55 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:46 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:27 0/0:0:0:0:0:25:0%:48:1E0:49:25:17:8:27 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:47 0/0:0:0:0:0:31:0%:59:1E0:52:31:16:15:31 0/0:0:0:0:0:14:0%:25:1E0:49:14:9:5:14 0/0:0:0:0:0:35:0%:67:1E0:53:35:15:20:35 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:51 0/0:0:0:0:0:29:0%:55:1E0:45:29:8:21:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:38 0/0:0:0:0:0:45:0%:85:1E0:51:45:27:18:45 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:42 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:52 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:42:0%:77:1E0:48:42:29:13:42 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:34 0/0:0:0:0:0:41:0%:78:1E0:47:41:28:13:42 0/0:0:0:0:0:20:0%:36:1E0:53:20:10:10:20 0/0:37:1:1:0:43:2.33%:70:5E-1:50:42:22:20:43 0/0:0:0:0:0:23:0%:44:1E0:47:23:7:16:23 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:40 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:30 0/0:0:0:0:0:49:0%:93:1E0:42:49:18:31:49 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:37 0/0:0:0:0:0:48:0%:89:1E0:45:48:28:20:49 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:19 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:40 0/0:60:1:0:1:45:2.22%:73:5E-1:44:44:24:20:45 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:37 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:44 0/0:0:0:0:0:20:0%:36:1E0:48:20:7:13:20 0/0:0:0:0:0:31:0%:59:1E0:50:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:39:0%:74:1E0:39:39:22:17:42 0/0:0:0:0:0:44:0%:81:1E0:40:44:29:15:47 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:31 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:29 0/0:0:0:0:0:68:0%:99:1E0:43:68:35:33:69 0/0:0:0:0:0:52:0%:96:1E0:44:52:26:26:53 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:40 0/0:0:0:0:0:51:0%:97:1E0:42:51:29:22:54 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:47 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:42 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:54:0%:99:1E0:40:54:24:30:55 0/0:0:0:0:0:45:0%:85:1E0:41:45:29:16:45 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:47 0/0:0:0:0:0:52:0%:96:1E0:40:52:25:27:54 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:46:0%:85:1E0:45:46:26:20:46 0/0:0:0:0:0:50:0%:92:1E0:41:50:28:22:50 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:53 0/0:0:0:0:0:61:0%:99:1E0:44:61:35:26:63 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:40 MTB_anc 343281 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|eccA3_Rv0282|gene293|transcript|Transcript_gene293|Coding|1/1|c.1152C>G|p.Ala384Ala|1152/1896|1152/1896|384/631||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.343281C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.343281C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:61:26:35:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:29:12:17:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:12:17:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:10:14:25:96%:99:3.101E-14:0:0:0:0:26 1/1:47:39:23:16:40:97.5%:99:3.8137E-22:60:1:1:0:40 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:47:20:27:48:97.92%:99:6.1512E-28:0:0:0:0:48 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:70:41:29:71:98.59%:99:1.0659E-41:0:0:0:0:71 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:47:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:47:20:27:48:97.92%:99:7.6145E-27:38:1:1:0:49 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:45:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:25:11:14:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:51:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:51:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:52:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:14:11:26:96.15%:99:7.9107E-15:0:0:0:0:28 1/1:48:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:15:21:37:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:19:22:42:97.62%:99:2.5612E-23:35:1:0:1:42 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:37:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:41:24:17:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:40:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:43:19:24:44:97.73%:99:1.5066E-25:0:0:0:0:45 MTB_anc 347216 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|eccC3_Rv0284|gene295|transcript|Transcript_gene295|Coding|1/1|c.1582G>A|p.Val528Ile|1582/3993|1582/3993|528/1330||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.347216G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.347216G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:53 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:21 0/0:0:0:0:0:42:0%:77:1E0:47:42:26:16:43 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:46 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:36:0%:66:1E0:51:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:34 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:49 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:44 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:12:22:34 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:34 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:32 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:23:0%:44:1E0:50:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:21:0%:40:1E0:48:21:7:14:21 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:27:0%:52:1E0:50:27:11:16:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:39:0%:74:1E0:49:39:20:19:39 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:59:0%:99:1E0:46:59:27:32:59 0/0:0:0:0:0:47:0%:89:1E0:46:47:28:19:48 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:43 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:43 0/0:0:0:0:0:53:0%:99:1E0:47:53:30:23:54 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:48 0/0:0:0:0:0:50:0%:92:1E0:43:50:18:32:51 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:44:0%:81:1E0:48:44:21:23:44 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:41:0%:78:1E0:47:41:17:24:41 0/0:0:0:0:0:39:0%:74:1E0:41:39:14:25:40 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:66:0%:99:1E0:44:66:33:33:66 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:37 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:27 0/0:0:0:0:0:51:0%:97:1E0:49:51:21:30:51 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:24:10:36 0/0:0:0:0:0:34:0%:62:1E0:50:34:14:20:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:43:0%:82:1E0:45:43:17:26:43 0/0:39:1:0:1:47:2.13%:77:5E-1:44:46:26:20:48 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:47:0%:89:1E0:50:47:18:29:47 0/0:0:0:0:0:21:0%:40:1E0:51:21:12:9:21 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:32 0/1:43:49:19:30:57:85.96%:99:3.2592E-24:45:8:2:6:58 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:39 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:23 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:35 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:39 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:48 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:39:1:1:0:35:2.86%:55:5E-1:43:34:13:21:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:60:1:0:1:39:2.56%:62:5E-1:40:38:17:21:39 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:43 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:43:0%:82:1E0:47:43:26:17:45 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:23 0/0:0:0:0:0:64:0%:99:1E0:42:64:34:30:64 0/0:0:0:0:0:67:0%:99:1E0:43:67:33:34:67 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:30 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:56:0%:99:1E0:41:56:27:29:57 0/0:0:0:0:0:59:0%:99:1E0:40:59:32:27:61 0/0:0:0:0:0:53:0%:99:1E0:37:53:24:29:55 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:48 0/0:0:0:0:0:46:0%:85:1E0:39:46:19:27:47 0/0:0:0:0:0:56:0%:99:1E0:43:56:21:35:57 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:37 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:44 0/0:0:0:0:0:41:0%:78:1E0:40:41:29:12:42 0/0:0:0:0:0:56:0%:99:1E0:41:56:26:30:56 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:56:0%:99:1E0:40:56:25:31:57 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:47:0%:89:1E0:38:47:23:24:48 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:46:0%:85:1E0:43:46:31:15:46 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:49 0/0:0:0:0:0:48:0%:89:1E0:41:48:32:16:49 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:21:10:31 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:39 0/0:0:0:0:0:58:0%:99:1E0:43:58:30:28:58 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 MTB_anc 350489 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|PPE4_Rv0286|gene297|transcript|Transcript_gene297|Coding|1/1|c.555C>G|p.Ala185Ala|555/1542|555/1542|185/513||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.350489C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.350489C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:50:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:28:16:12:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:45:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:39:21:18:40:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:51:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:51:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:33:20:13:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:60:28:32:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:41:16:25:42:97.62%:99:2.5612E-23:39:1:0:1:42 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:19:11:31:96.77%:99:6.8754E-17:37:1:0:1:32 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 358498 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|tam_Rv0294|gene305|transcript|Transcript_gene305|Coding|1/1|c.328G>A|p.Val110Ile|328/786|328/786|110/261||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.358498G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.358498G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:40:56:30:26:56 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:50 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:32 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:46 0/0:0:0:0:0:17:0%:33:1E0:44:17:11:6:18 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:46 0/1:42:18:11:7:21:85.71%:84:3.7603E-9:41:3:2:1:21 0/0:36:2:1:1:31:6.45%:40:2.459E-1:39:29:19:10:31 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:33 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:29 0/0:0:0:0:0:51:0%:97:1E0:44:51:24:27:51 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:26:14:41 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:26 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:23 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:26 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:39 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:45 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:27:0%:52:1E0:38:27:17:10:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:43:0%:82:1E0:37:43:24:19:45 0/0:0:0:0:0:33:0%:63:1E0:38:33:23:10:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:17:0%:33:1E0:47:17:7:10:17 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:41:0%:78:1E0:38:41:25:16:42 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:45 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:45 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:49 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:25 0/0:0:0:0:0:47:0%:89:1E0:45:47:23:24:47 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:26 0/0:0:0:0:0:15:0%:29:1E0:47:15:9:6:15 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:43 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:43 0/0:0:0:0:0:40:0%:74:1E0:38:40:24:16:40 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:29:0%:55:1E0:38:29:19:10:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:25 0/0:0:0:0:0:35:0%:67:1E0:42:35:24:11:35 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:0:0:0:0:37:0%:70:1E0:44:37:25:12:37 0/0:0:0:0:0:25:0%:48:1E0:40:25:19:6:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:25 0/0:0:0:0:0:41:0%:78:1E0:38:41:25:16:43 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:38 0/0:38:1:0:1:19:5.26%:28:5E-1:47:18:12:6:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:37 0/0:0:0:0:0:25:0%:48:1E0:36:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:38:33:22:11:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:17:6:24 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:23:12:35 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:23:7:31 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:48:0%:89:1E0:38:48:26:22:48 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:0:0:0:0:55:0%:99:1E0:39:55:33:22:55 0/0:0:0:0:0:44:0%:81:1E0:41:44:27:17:46 0/0:0:0:0:0:31:0%:59:1E0:39:31:20:11:31 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:23 0/0:0:0:0:0:47:0%:89:1E0:39:47:32:15:49 0/0:0:0:0:0:36:0%:66:1E0:38:36:21:15:37 0/0:0:0:0:0:34:0%:62:1E0:37:34:18:16:35 0/0:0:0:0:0:36:0%:66:1E0:40:36:23:13:38 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:47 0/0:0:0:0:0:37:0%:70:1E0:37:37:25:12:38 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:28:0%:51:1E0:36:28:19:9:29 0/0:0:0:0:0:42:0%:77:1E0:38:42:21:21:46 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:46:0%:85:1E0:36:46:28:18:47 0/0:0:0:0:0:36:0%:66:1E0:38:36:23:13:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:22 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:17 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:50:0%:92:1E0:40:50:22:28:50 0/0:0:0:0:0:57:0%:99:1E0:40:57:35:22:58 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:34 MTB_anc 364207 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|vapC2_Rv0301|gene312|transcript|Transcript_gene312|Coding|1/1|c.164G>T|p.Arg55Leu|164/426|164/426|55/141||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.364207G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.364207G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:33 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:18 0/0:0:0:0:0:52:0%:96:1E0:36:52:31:21:52 0/0:0:0:0:0:22:0%:40:1E0:38:22:14:8:24 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:23 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:18 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:31 0/0:0:0:0:0:24:0%:44:1E0:37:24:15:9:26 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:17 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:23 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:20:8:28 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:41:0%:78:1E0:38:41:29:12:42 0/0:0:0:0:0:14:0%:25:1E0:35:14:11:3:16 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:37:27:16:11:27 0/0:0:0:0:0:16:0%:29:1E0:35:16:9:7:17 0/0:0:0:0:0:14:0%:25:1E0:34:14:11:3:14 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:21:0%:40:1E0:36:21:15:6:23 0/0:0:0:0:0:37:0%:70:1E0:37:37:21:16:40 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:14:8:22 0/0:0:0:0:0:24:0%:44:1E0:35:24:14:10:25 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:19:5:24 0/0:0:0:0:0:19:0%:37:1E0:40:19:14:5:19 0/0:0:0:0:0:25:0%:48:1E0:40:25:19:6:25 0/0:0:0:0:0:34:0%:62:1E0:36:34:17:17:35 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:22 0/0:0:0:0:0:16:0%:29:1E0:35:16:7:9:16 0/0:0:0:0:0:47:0%:89:1E0:39:47:29:18:47 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:26 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:29 0/0:0:0:0:0:25:0%:48:1E0:37:25:16:9:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:33 0/0:0:0:0:0:66:0%:99:1E0:37:66:43:23:68 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:22:0%:40:1E0:38:22:15:7:23 0/0:0:0:0:0:40:0%:74:1E0:35:40:23:17:41 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:24:0%:44:1E0:36:24:16:8:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:17:6:23 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:21 0/0:0:0:0:0:25:0%:48:1E0:37:25:18:7:25 0/0:0:0:0:0:37:0%:70:1E0:38:37:26:11:37 0/0:0:0:0:0:27:0%:52:1E0:36:27:21:6:28 0/0:0:0:0:0:36:0%:66:1E0:36:36:24:12:37 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:15 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:27 0/0:0:0:0:0:21:0%:40:1E0:35:21:14:7:24 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:16 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:23 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:36:26:17:9:27 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:13 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:24 0/0:0:0:0:0:38:0%:70:1E0:37:38:23:15:39 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:28 0/0:0:0:0:0:34:0%:62:1E0:37:34:26:8:37 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:18:7:25 0/0:0:0:0:0:37:0%:70:1E0:37:37:21:16:37 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:32 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:21 0/0:0:0:0:0:27:0%:52:1E0:37:27:14:13:28 0/0:0:0:0:0:11:0%:22:1E0:40:11:8:3:11 0/0:0:0:0:0:17:0%:33:1E0:41:17:5:12:17 0/0:0:0:0:0:34:0%:62:1E0:37:34:23:11:36 1/1:37:33:16:17:34:97.06%:99:1.2301E-18:38:1:1:0:34 0/0:37:1:0:1:21:4.76%:31:5E-1:42:20:13:7:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:21 0/0:0:0:0:0:26:0%:47:1E0:36:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:38:25:17:8:26 0/0:0:0:0:0:33:0%:63:1E0:37:33:20:13:34 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:20 0/0:0:0:0:0:29:0%:55:1E0:37:29:20:9:29 0/0:0:0:0:0:17:0%:33:1E0:37:17:13:4:18 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:32 0/0:0:0:0:0:23:0%:44:1E0:36:23:17:6:23 0/0:0:0:0:0:18:0%:32:1E0:37:18:13:5:18 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:17 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:23 0/0:0:0:0:0:15:0%:29:1E0:38:15:11:4:15 0/0:0:0:0:0:15:0%:29:1E0:40:15:12:3:16 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:25 0/0:0:0:0:0:36:0%:66:1E0:37:36:19:17:37 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:23 0/0:0:0:0:0:21:0%:40:1E0:35:21:14:7:23 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:26 0/0:0:0:0:0:39:0%:74:1E0:37:39:23:16:42 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:23 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:19 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:30 0/0:0:0:0:0:33:0%:63:1E0:36:33:23:10:34 0/0:0:0:0:0:33:0%:63:1E0:36:33:22:11:34 0/0:0:0:0:0:27:0%:52:1E0:37:27:9:18:29 0/0:0:0:0:0:47:0%:89:1E0:37:47:26:21:48 0/0:0:0:0:0:27:0%:52:1E0:36:27:18:9:28 0/0:0:0:0:0:24:0%:44:1E0:35:24:14:10:27 0/0:0:0:0:0:21:0%:40:1E0:36:21:15:6:21 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:22 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:31 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:47 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:22:12:34 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:20 0/0:0:0:0:0:19:0%:37:1E0:35:19:15:4:20 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:37 0/0:0:0:0:0:27:0%:52:1E0:38:27:21:6:28 0/0:0:0:0:0:39:0%:74:1E0:36:39:29:10:40 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:21 0/0:0:0:0:0:38:0%:70:1E0:36:38:22:16:38 0/0:0:0:0:0:22:0%:40:1E0:36:22:17:5:26 0/0:0:0:0:0:31:0%:59:1E0:36:31:17:14:34 0/0:0:0:0:0:43:0%:82:1E0:37:43:22:21:46 0/0:0:0:0:0:19:0%:37:1E0:36:19:13:6:20 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:20 0/0:0:0:0:0:40:0%:74:1E0:36:40:26:14:40 0/0:0:0:0:0:29:0%:55:1E0:36:29:25:4:30 0/0:0:0:0:0:26:0%:47:1E0:36:26:18:8:26 0/0:0:0:0:0:29:0%:55:1E0:35:29:21:8:31 0/0:0:0:0:0:27:0%:52:1E0:35:27:16:11:27 0/0:0:0:0:0:26:0%:47:1E0:35:26:20:6:27 0/0:0:0:0:0:29:0%:55:1E0:37:29:19:10:31 0/0:0:0:0:0:27:0%:52:1E0:35:27:20:7:28 0/0:0:0:0:0:35:0%:67:1E0:37:35:27:8:37 0/0:0:0:0:0:28:0%:51:1E0:35:28:20:8:32 0/0:0:0:0:0:24:0%:44:1E0:36:24:19:5:24 0/0:0:0:0:0:24:0%:44:1E0:35:24:18:6:25 0/0:0:0:0:0:30:0%:55:1E0:36:30:19:11:33 0/0:0:0:0:0:52:0%:96:1E0:36:52:35:17:54 0/0:0:0:0:0:34:0%:62:1E0:37:34:23:11:34 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:25 0/0:0:0:0:0:29:0%:55:1E0:35:29:19:10:29 0/0:0:0:0:0:30:0%:55:1E0:36:30:17:13:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:17:9:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:29 0/0:0:0:0:0:30:0%:55:1E0:37:30:18:12:34 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:15 0/0:0:0:0:0:33:0%:63:1E0:37:33:20:13:34 0/0:0:0:0:0:48:0%:89:1E0:38:48:29:19:49 0/0:0:0:0:0:33:0%:63:1E0:36:33:23:10:34 0/0:0:0:0:0:22:0%:40:1E0:35:22:13:9:24 MTB_anc 367471 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|PPE5_Rv0304c|gene315|transcript|Transcript_gene315|Coding|1/1|c.5294T>C|p.Phe1765Ser|5294/6615|5294/6615|1765/2204||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.367471A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.367471A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:67:32:35:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:52:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:50:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:22:10:33:96.97%:99:4.7095E-18:60:1:0:1:34 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:51:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:63:33:30:63:100%:99:1.657E-37:0:0:0:0:64 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:39:23:16:40:97.5%:99:3.6742E-23:0:0:0:0:42 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:32:19:13:33:96.97%:99:4.7095E-18:38:1:1:0:34 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:50:37:16:21:38:97.37%:99:5.7269E-22:0:0:0:0:39 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:17:11:6:18:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:39:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:37:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:41:29:15:14:30:96.67%:99:2.6212E-16:37:1:0:1:32 MTB_anc 367707 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|PPE5_Rv0304c|gene315|transcript|Transcript_gene315|Coding|1/1|c.5058G>C|p.Glu1686Asp|5058/6615|5058/6615|1686/2204||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.367707C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.367707C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:10:0%:17:1E0:45:10:5:5:10 0/0:0:0:0:0:54:0%:99:1E0:41:54:21:33:56 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:23 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:20 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:18:0%:32:1E0:45:18:5:13:22 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:38 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:49 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:16 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:17:0%:33:1E0:43:17:5:12:18 0/0:0:0:0:0:15:0%:29:1E0:50:15:7:8:18 0/0:37:1:0:1:15:6.67%:21:5E-1:45:14:7:7:16 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:36 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:25 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:32 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:35 0/0:60:1:0:1:26:3.85%:38:5E-1:41:25:11:14:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:50:0%:92:1E0:42:50:25:25:51 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:39 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:25 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:29 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:22 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:16 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:23 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:42 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:37 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:18 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:31 0/0:0:0:0:0:16:0%:29:1E0:39:16:8:8:16 0/0:0:0:0:0:42:0%:77:1E0:46:42:24:18:45 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:22 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:21 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:42 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:39 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:34 0/0:0:0:0:0:17:0%:33:1E0:42:17:4:13:18 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:15 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:17 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:44 0/0:0:0:0:0:28:0%:51:1E0:46:28:9:19:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:20 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:19 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:22 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:37 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:17 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:32 0/0:0:0:0:0:47:0%:89:1E0:45:47:23:24:49 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:23 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:32 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:17 1/1:36:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:23 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:29 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:39:1:0:1:21:4.76%:31:5E-1:38:20:8:12:23 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:36:0%:66:1E0:38:36:25:11:41 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:31 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:54:0%:99:1E0:41:54:22:32:57 0/0:0:0:0:0:46:0%:85:1E0:40:46:18:28:51 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:20 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:39 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:29 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:27 0/0:0:0:0:0:23:0%:44:1E0:36:23:14:9:23 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:18 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:29 0/0:0:0:0:0:13:0%:25:1E0:38:13:7:6:13 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:33 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:12:18:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:23 0/0:0:0:0:0:35:0%:67:1E0:36:35:14:21:37 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:46 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:44 0/0:0:0:0:0:33:0%:63:1E0:40:33:10:23:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:26 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:42 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:57 0/0:0:0:0:0:49:0%:93:1E0:41:49:29:20:54 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:44 MTB_anc 372149 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|PPE5_Rv0304c|gene315|transcript|Transcript_gene315|Coding|1/1|c.616T>C|p.Leu206Leu|616/6615|616/6615|206/2204||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.372149A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.372149A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:51:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:49:22:7:15:23:95.65%:99:2.9149E-12:32:1:1:0:24 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:45:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:46:24:13:11:25:96%:99:2.0568E-13:38:1:1:0:25 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:19:11:8:20:95%:99:2.8292E-11:0:0:0:0:21 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:21:12:9:22:95.45%:99:1.0931E-11:35:1:1:0:24 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:20:9:11:22:90.91%:98:1.3117E-10:36:2:1:1:22 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:20:10:10:21:95.24%:99:4.0873E-11:38:1:0:1:22 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:35:14:21:36:97.22%:99:8.3613E-20:33:1:1:0:39 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:39:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:48:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:34:21:13:35:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:28:17:11:29:96.55%:99:1.3074E-16:0:0:0:0:32 1/1:43:28:16:12:29:96.55%:99:9.9776E-16:38:1:0:1:32 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:32:14:18:33:96.97%:99:4.7095E-18:37:1:1:0:36 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:29:20:9:30:96.67%:99:2.6212E-16:33:1:0:1:31 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:62 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:41:20:9:11:21:95.24%:99:7.2544E-12:0:0:0:0:24 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:41 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:29 1/1:36:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:28 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:34:13:21:35:97.14%:99:3.5146E-20:0:0:0:0:39 1/1:36:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:23 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:39:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:37:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:51 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 MTB_anc 373282 . TA T . PASS AC=298;AF=0.993;AN=300;ANN=T|frameshift_variant|HIGH|PPE6_Rv0305c|gene316|transcript|Transcript_gene316|Coding|1/1|c.2429delT|p.Leu810fs|2429/2892|2429/2892|810/963||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.373283delA||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.373283delA||||||;LOF=(PPE6_Rv0305c|gene316|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:29:11:18:29:93.55%:99:2.6212E-16:36:1:0:1:30 1/1:49:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:47:18:29:48:97.92%:99:7.6145E-27:36:1:0:1:48 1/1:47:27:15:12:26:96.43%:99:3.7915E-15:38:1:1:0:28 1/1:42:24:10:14:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:47:21:12:9:22:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:46:38:13:25:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:24:9:15:24:96%:99:2.0568E-13:60:1:1:0:25 1/1:41:23:9:14:24:95.83%:99:7.7525E-13:72:1:1:0:25 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:9:23:33:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:18:8:10:19:90%:87:1.6758E-9:49:2:1:1:20 1/1:42:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:15:8:7:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:13:8:5:14:92.86%:64:3.7391E-7:33:1:0:1:14 1/1:42:27:12:15:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:21:6:15:23:91.3%:99:3.6437E-11:32:2:1:1:23 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:35:17:18:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:24:10:14:22:100%:99:3.101E-14:0:0:0:0:24 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 0/1:45:15:4:11:17:88.24%:71:7.3277E-8:30:2:1:1:17 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:13:12:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:23:11:12:21:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:28:16:12:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:33:13:20:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:42:33:14:19:34:97.06%:99:1.2301E-18:39:1:0:1:34 1/1:43:54:18:36:53:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:28:7:21:27:96.55%:99:9.9776E-16:33:1:0:1:29 1/1:45:39:22:17:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:41:27:8:19:28:93.1%:99:3.7915E-15:37:1:1:0:28 1/1:45:22:12:10:23:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:44:13:6:7:14:92.86%:64:3.7391E-7:34:1:0:1:14 1/1:47:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:18:6:12:20:90%:87:1.6758E-9:36:2:1:1:20 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:18:10:8:18:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:39:33:15:18:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:40:28:11:17:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:44:22:22:42:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:23:13:10:25:92%:99:2.7767E-12:32:2:0:2:25 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:18:5:13:20:90%:87:1.6758E-9:33:2:1:1:20 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:13:16:30:93.55%:99:1.1344E-15:33:2:0:2:31 1/1:42:23:10:13:24:95.83%:99:7.7525E-13:34:1:0:1:24 1/1:41:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:45:15:30:47:95.74%:99:7.2338E-25:47:2:1:1:47 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:17:14:33:91.18%:99:2.7308E-16:51:3:2:1:34 1/1:43:57:25:32:58:95%:99:4.1102E-31:40:3:2:1:60 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:11:7:4:12:91.67%:53:4.8074E-6:60:1:1:0:12 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:37:13:24:35:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:30:13:17:30:93.75%:99:3.0612E-16:53:2:2:0:33 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:35:15:20:35:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:39:35:14:21:36:97.22%:99:8.3613E-20:30:1:0:1:36 1/1:45:25:16:9:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:35:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:36:15:21:37:97.3%:99:2.1762E-20:33:1:0:1:37 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:17:10:7:16:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:33:15:18:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:40:25:10:15:26:92.59%:99:2.0853E-13:34:2:1:1:27 1/1:42:26:11:15:27:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:42:12:6:6:11:100%:64:3.698E-7:0:0:0:0:12 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:22:7:15:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:13:21:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:38:14:24:40:95%:99:8.0088E-21:46:2:1:1:40 1/1:46:15:8:7:15:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:41:42:16:26:44:93.33%:99:3.9431E-23:32:2:1:1:45 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:48:24:24:47:100%:99:1.554E-28:0:0:0:0:48 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:26:11:15:25:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:24:7:17:23:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:11:15:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:41:25:12:13:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:22:7:15:23:95.65%:99:2.9149E-12:29:1:1:0:23 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:22:11:11:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:14:14:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:30:9:21:30:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:37:35:15:20:37:94.59%:99:4.2437E-19:32:2:0:2:37 1/1:39:29:11:18:28:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:41:40:17:23:39:97.56%:99:9.8874E-23:33:1:0:1:41 1/1:39:26:7:19:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:41:39:21:18:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:49:24:25:48:100%:99:3.925E-29:0:0:0:0:49 1/1:42:30:17:13:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:35:32:19:13:33:94.12%:99:2.2142E-17:33:2:0:2:34 1/1:38:20:7:13:21:95.24%:99:4.0873E-11:32:1:0:1:21 1/1:40:39:15:24:39:97.5%:99:3.8137E-22:35:1:0:1:40 1/1:38:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:38:18:20:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:24:9:15:22:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:9:22:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 0/1:38:24:12:12:27:85.71%:99:4.7015E-12:31:4:0:4:28 1/1:36:20:6:14:19:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:36:16:20:38:94.74%:99:1.1316E-19:32:2:1:1:38 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:51:19:32:49:98.08%:99:3.3479E-29:33:1:0:1:52 1/1:40:41:19:22:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:34:22:12:34:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:40:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:7:24:34:91.18%:99:2.7308E-16:42:3:1:2:34 1/1:40:38:16:22:37:97.44%:99:1.4697E-21:60:1:0:1:39 1/1:41:38:12:26:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:40:18:22:38:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:14:16:31:96.77%:99:6.8754E-17:38:1:0:1:31 1/1:42:37:20:17:37:97.37%:99:5.6582E-21:39:1:1:0:38 1/1:40:54:28:26:53:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:37:15:22:35:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 374731 . C T . PASS AC=299;AF=0.997;AN=300;ANN=T|synonymous_variant|LOW|PPE6_Rv0305c|gene316|transcript|Transcript_gene316|Coding|1/1|c.981G>A|p.Thr327Thr|981/2892|981/2892|327/963||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.374731C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.374731C>T||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:21:12:9:23:91.3%:99:3.6437E-11:35:2:1:1:26 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:47:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:43:28:19:9:30:93.33%:99:4.194E-15:60:2:0:2:31 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:49:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:22:10:12:24:91.67%:99:1.0078E-11:34:2:0:2:24 1/1:40:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:20:12:8:21:95.24%:99:4.0873E-11:38:1:1:0:21 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:47:16:7:9:17:94.12%:81:7.7134E-9:60:1:1:0:19 1/1:43:23:15:8:24:95.83%:99:7.7525E-13:39:1:1:0:25 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:17:15:33:96.97%:99:4.7095E-18:60:1:1:0:33 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:30:13:17:31:96.77%:99:6.8754E-17:39:1:1:0:31 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:43:22:9:13:23:95.65%:99:2.9149E-12:33:1:1:0:24 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:28:16:12:29:96.55%:99:9.9776E-16:70:1:1:0:30 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:60:24:36:60:100%:99:1.035E-35:0:0:0:0:65 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:20:9:11:21:95.24%:99:4.0873E-11:32:1:1:0:22 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:36:19:17:38:94.74%:99:2.2598E-21:0:0:0:0:40 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:24:11:13:26:92.31%:99:2.0568E-13:38:1:0:1:27 1/1:39:23:6:17:24:95.83%:99:7.7525E-13:39:1:1:0:27 0/1:43:17:11:6:19:89.47%:82:5.9414E-9:47:2:2:0:21 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:28 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:29 1/1:37:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:49:25:24:49:100%:99:3.925E-29:0:0:0:0:54 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 MTB_anc 381030 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0312_Rv0312|gene323|transcript|Transcript_gene323|Coding|1/1|c.475G>A|p.Gly159Ser|475/1863|475/1863|159/620||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.381030G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.381030G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:52:32:13:19:33:96.97%:99:4.7095E-18:32:1:0:1:33 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:48:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:60:34:26:60:100%:99:1.035E-35:0:0:0:0:63 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:53:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:64:25:39:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:39:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:60:29:31:60:100%:99:1.035E-35:0:0:0:0:63 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 381065 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0312_Rv0312|gene323|transcript|Transcript_gene323|Coding|1/1|c.510G>A|p.Ala170Ala|510/1863|510/1863|170/620||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.381065G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.381065G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:49:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:22:12:10:23:95.65%:99:2.9149E-12:39:1:0:1:23 1/1:51:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:12:15:28:96.43%:99:3.7915E-15:39:1:0:1:29 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:47:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:51:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:50:29:21:51:98.04%:99:1.3013E-28:37:1:1:0:52 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:67:28:39:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:42:61:28:33:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:35:18:17:36:97.22%:99:8.3613E-20:38:1:0:1:38 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 383177 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv0314c_Rv0314c|gene325|transcript|Transcript_gene325|Coding|1/1|c.365C>T|p.Pro122Leu|365/663|365/663|122/220||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.383177G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.383177G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:61:0%:99:1E0:40:61:34:27:61 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:16 0/0:0:0:0:0:63:0%:99:1E0:43:63:37:26:64 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:32:1:1:0:32:3.12%:48:5E-1:42:31:11:20:32 0/0:0:0:0:0:30:0%:55:1E0:50:30:9:21:30 0/0:37:1:0:1:25:4%:38:5E-1:47:24:12:12:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:40 0/0:38:1:1:0:27:3.7%:41:5E-1:41:26:13:13:27 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:56:0%:99:1E0:41:56:30:26:57 0/0:0:0:0:0:22:0%:40:1E0:47:22:15:7:22 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:38:1:1:0:33:3.03%:52:5E-1:44:32:13:19:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:20:9:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:33 0/0:34:1:1:0:30:3.33%:44:5E-1:43:29:13:16:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:60:1:1:0:52:1.92%:83:5E-1:49:51:27:24:52 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:43 0/0:0:0:0:0:51:0%:97:1E0:44:51:25:26:53 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:32 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:42 0/0:0:0:0:0:45:0%:85:1E0:42:45:29:16:45 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:20 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:41 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:21 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:50 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:30 0/0:0:0:0:0:45:0%:85:1E0:44:45:28:17:46 0/0:0:0:0:0:52:0%:96:1E0:45:52:25:27:52 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:43:0%:82:1E0:43:43:13:30:43 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:23 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:35 0/0:0:0:0:0:68:0%:99:1E0:45:68:33:35:68 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 0/0:60:1:1:0:18:5.56%:24:5E-1:47:17:10:7:18 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:17 0/0:0:0:0:0:43:0%:82:1E0:48:43:23:20:44 0/0:0:0:0:0:33:0%:63:1E0:52:33:18:15:33 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:33:0%:63:1E0:51:33:19:14:33 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:44 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:38 0/0:39:1:1:0:30:3.33%:44:5E-1:43:29:10:19:30 0/0:0:0:0:0:45:0%:85:1E0:41:45:17:28:46 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:21 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:20 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:25 0/0:0:0:0:0:38:0%:70:1E0:47:38:26:12:38 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:21 0/0:0:0:0:0:54:0%:99:1E0:39:54:35:19:55 0/0:36:1:0:1:24:4.17%:34:5E-1:40:23:9:14:24 0/0:0:0:0:0:54:0%:99:1E0:44:54:31:23:54 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:44 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:20 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:46 0/0:0:0:0:0:51:0%:97:1E0:39:51:25:26:51 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:47:0%:89:1E0:40:47:20:27:49 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:41 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:45:0%:85:1E0:38:45:25:20:45 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:32 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:51:0%:97:1E0:39:51:21:30:54 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:44 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:40 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:43 0/0:60:1:1:0:35:2.86%:55:5E-1:42:34:22:12:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:9:24:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:38 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:47 0/0:60:1:1:0:43:2.33%:70:5E-1:42:42:22:20:43 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 MTB_anc 383629 . C T . PASS AC=14;AF=0.047;AN=300;ANN=T|stop_gained|HIGH|Rv0315_Rv0315|gene326|transcript|Transcript_gene326|Coding|1/1|c.28C>T|p.Arg10*|28/885|28/885|10/294||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.383629C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.383629C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:35:0%:67:1E0:37:35:24:11:35 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:17 0/0:0:0:0:0:45:0%:85:1E0:40:45:34:11:48 0/0:0:0:0:0:24:0%:44:1E0:39:24:18:6:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:31:6:38 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:16 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:29 0/0:0:0:0:0:18:0%:32:1E0:39:18:15:3:18 0/0:0:0:0:0:27:0%:52:1E0:38:27:25:2:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:0:0:0:0:28:0%:51:1E0:38:28:18:10:28 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:45 0/0:0:0:0:0:15:0%:29:1E0:44:15:10:5:16 0/0:0:0:0:0:40:0%:74:1E0:37:40:27:13:40 0/0:0:0:0:0:20:0%:36:1E0:38:20:13:7:20 0/0:0:0:0:0:35:0%:67:1E0:39:35:27:8:38 0/0:0:0:0:0:18:0%:32:1E0:36:18:13:5:19 0/0:0:0:0:0:21:0%:40:1E0:37:21:15:6:21 0/0:0:0:0:0:20:0%:36:1E0:40:20:14:6:21 0/0:0:0:0:0:20:0%:36:1E0:41:20:15:5:20 0/0:0:0:0:0:18:0%:32:1E0:41:18:14:4:18 0/0:0:0:0:0:54:0%:99:1E0:38:54:36:18:55 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:40:0%:74:1E0:39:40:29:11:41 0/0:0:0:0:0:36:0%:66:1E0:38:36:24:12:37 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:22 0/0:0:0:0:0:16:0%:29:1E0:37:16:15:1:18 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:29 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:33:1:1:0:31:3.23%:48:5E-1:41:30:19:11:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:24:8:34 0/0:0:0:0:0:28:0%:51:1E0:36:28:17:11:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:24:8:32 0/0:0:0:0:0:37:0%:70:1E0:37:37:27:10:38 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:38:1:1:0:34:2.94%:51:5E-1:39:33:21:12:35 0/0:0:0:0:0:29:0%:55:1E0:38:29:22:7:31 0/0:0:0:0:0:60:0%:99:1E0:39:60:34:26:60 0/0:0:0:0:0:42:0%:77:1E0:39:42:29:13:44 0/0:0:0:0:0:33:0%:63:1E0:38:33:29:4:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:27:9:38 0/0:0:0:0:0:41:0%:78:1E0:39:41:27:14:42 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:24 0/0:0:0:0:0:31:0%:59:1E0:37:31:21:10:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:20:8:30 0/0:0:0:0:0:38:0%:70:1E0:38:38:26:12:40 0/0:0:0:0:0:41:0%:78:1E0:39:41:28:13:41 0/0:0:0:0:0:35:0%:67:1E0:37:35:26:9:35 0/0:0:0:0:0:43:0%:82:1E0:38:43:34:9:43 0/0:0:0:0:0:38:0%:70:1E0:38:38:25:13:38 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:16 0/0:0:0:0:0:39:0%:74:1E0:40:39:28:11:39 0/0:0:0:0:0:27:0%:52:1E0:39:27:19:8:27 0/0:0:0:0:0:29:0%:55:1E0:38:29:27:2:31 0/0:60:1:1:0:33:3.03%:52:5E-1:37:32:23:9:33 0/0:0:0:0:0:35:0%:67:1E0:37:35:29:6:38 0/0:0:0:0:0:33:0%:63:1E0:38:33:22:11:35 0/0:0:0:0:0:20:0%:36:1E0:39:20:14:6:20 0/0:0:0:0:0:34:0%:62:1E0:39:34:23:11:36 0/0:0:0:0:0:37:0%:70:1E0:38:37:24:13:38 0/0:0:0:0:0:31:0%:59:1E0:39:31:22:9:31 0/0:0:0:0:0:40:0%:74:1E0:36:40:37:3:42 0/0:37:1:1:0:39:2.56%:62:5E-1:37:38:24:14:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:39:0%:74:1E0:39:39:27:12:39 0/0:0:0:0:0:58:0%:99:1E0:39:58:43:15:58 0/0:25:2:1:1:26:7.69%:30:2.451E-1:38:24:17:7:27 0/0:0:0:0:0:46:0%:85:1E0:39:46:34:12:46 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:20 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:19:6:25 0/0:0:0:0:0:13:0%:25:1E0:39:13:8:5:13 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:36:0%:66:1E0:39:36:26:10:37 0/0:0:0:0:0:26:0%:47:1E0:41:26:19:7:28 0/0:0:0:0:0:37:0%:70:1E0:38:37:26:11:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:38:35:22:13:35 0/0:33:1:0:1:29:3.45%:45:5E-1:39:28:19:9:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:31 0/0:0:0:0:0:51:0%:97:1E0:38:51:34:17:53 0/0:0:0:0:0:29:0%:55:1E0:38:29:19:10:30 0/0:0:0:0:0:21:0%:40:1E0:38:21:14:7:21 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:34 0/0:0:0:0:0:35:0%:67:1E0:37:35:27:8:35 0/0:0:0:0:0:36:0%:66:1E0:38:36:28:8:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:0:0:0:0:30:0%:55:1E0:38:30:20:10:31 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:42:0%:77:1E0:37:42:30:12:44 0/0:0:0:0:0:17:0%:33:1E0:38:17:15:2:17 0/0:0:0:0:0:43:0%:82:1E0:38:43:29:14:43 0/0:0:0:0:0:18:0%:32:1E0:37:18:17:1:19 0/0:0:0:0:0:27:0%:52:1E0:37:27:21:6:27 1/1:39:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:32:0%:59:1E0:37:32:23:9:32 1/1:39:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:39:0%:74:1E0:38:39:30:9:40 0/0:0:0:0:0:31:0%:59:1E0:37:31:24:7:33 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:23 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:35:0%:67:1E0:37:35:24:11:36 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:43 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:39:31:21:10:33 0/0:0:0:0:0:22:0%:40:1E0:35:22:18:4:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:23:8:32 0/0:0:0:0:0:35:0%:67:1E0:38:35:27:8:37 0/0:0:0:0:0:37:0%:70:1E0:37:37:27:10:37 0/0:0:0:0:0:25:0%:48:1E0:36:25:21:4:26 0/0:0:0:0:0:43:0%:82:1E0:37:43:34:9:45 0/0:0:0:0:0:28:0%:51:1E0:37:28:22:6:29 0/0:0:0:0:0:54:0%:99:1E0:38:54:37:17:54 0/0:0:0:0:0:42:0%:77:1E0:38:42:25:17:42 0/0:0:0:0:0:30:0%:55:1E0:39:30:21:9:30 0/0:0:0:0:0:24:0%:44:1E0:37:24:17:7:25 0/0:0:0:0:0:37:0%:70:1E0:37:37:30:7:38 0/0:0:0:0:0:33:0%:63:1E0:37:33:24:9:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:26:10:37 0/0:0:0:0:0:30:0%:55:1E0:37:30:24:6:31 0/0:0:0:0:0:29:0%:55:1E0:37:29:21:8:29 0/0:0:0:0:0:26:0%:47:1E0:36:26:19:7:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:25:5:33 0/0:0:0:0:0:37:0%:70:1E0:36:37:31:6:37 0/0:0:0:0:0:30:0%:55:1E0:36:30:22:8:33 0/0:0:0:0:0:36:0%:66:1E0:36:36:30:6:37 0/0:0:0:0:0:26:0%:47:1E0:35:26:23:3:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:19:4:25 0/0:0:0:0:0:32:0%:59:1E0:37:32:24:8:33 0/0:0:0:0:0:39:0%:74:1E0:37:39:29:10:40 0/0:0:0:0:0:33:0%:63:1E0:39:33:25:8:33 0/0:0:0:0:0:34:0%:62:1E0:37:34:28:6:34 0/0:0:0:0:0:32:0%:59:1E0:37:32:22:10:34 0/0:0:0:0:0:33:0%:63:1E0:38:33:23:10:33 0/0:0:0:0:0:21:0%:40:1E0:38:21:18:3:21 0/0:0:0:0:0:30:0%:55:1E0:37:30:21:9:30 0/0:0:0:0:0:35:0%:67:1E0:38:35:28:7:35 0/0:0:0:0:0:29:0%:55:1E0:37:29:23:6:29 0/0:38:1:1:0:21:4.76%:31:5E-1:37:20:14:6:21 0/0:0:0:0:0:33:0%:63:1E0:37:33:24:9:33 0/0:0:0:0:0:30:0%:55:1E0:37:30:24:6:31 0/0:0:0:0:0:40:0%:74:1E0:37:40:34:6:40 0/0:38:1:1:0:22:4.55%:31:5E-1:39:21:18:3:23 MTB_anc 385271 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|glpQ2_Rv0317c|gene328|transcript|Transcript_gene328|Coding|1/1|c.673C>G|p.His225Asp|673/771|673/771|225/256||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.385271G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.385271G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:50:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:31:12:19:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:58:21:37:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:37:18:19:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:61:29:32:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:15:16:32:96.88%:99:2.1486E-18:0:0:0:0:34 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:38:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:13:19:33:96.97%:99:4.7095E-18:52:1:1:0:33 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:28:15:13:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 386935 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv0318c_Rv0318c|gene330|transcript|Transcript_gene330|Coding|1/1|c.165G>A|p.Ala55Ala|165/795|165/795|55/264||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.386935C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.386935C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:53:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:66:33:33:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:72:32:40:72:100%:99:6.7558E-43:0:0:0:0:73 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:52:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:35:19:16:36:97.22%:99:8.3613E-20:38:1:0:1:37 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:51 1/1:39:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:33:26:7:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:61:26:35:61:100%:99:2.609E-36:0:0:0:0:62 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:63:28:35:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 MTB_anc 387363 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|synonymous_variant|LOW|pcp_Rv0319|gene331|transcript|Transcript_gene331|Coding|1/1|c.216G>A|p.Pro72Pro|216/669|216/669|72/222||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.387363G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.387363G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:38:46:33:13:47 0/0:0:0:0:0:11:0%:22:1E0:41:11:5:6:11 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:48 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:22:6:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:17:6:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:48:0%:89:1E0:39:48:29:19:48 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:21 0/0:0:0:0:0:57:0%:99:1E0:41:57:34:23:59 0/0:0:0:0:0:23:0%:44:1E0:40:23:18:5:23 0/0:0:0:0:0:28:0%:51:1E0:38:28:18:10:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:20 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:27 0/0:0:0:0:0:29:0%:55:1E0:37:29:12:17:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:47:0%:89:1E0:38:47:33:14:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:23 0/0:0:0:0:0:28:0%:51:1E0:37:28:18:10:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:21 0/0:0:0:0:0:26:0%:47:1E0:42:26:20:6:26 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:21:11:32 0/0:0:0:0:0:31:0%:59:1E0:38:31:21:10:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:25:0%:48:1E0:39:25:21:4:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:24:7:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:22:14:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:23:8:31 0/0:0:0:0:0:68:0%:99:1E0:43:68:44:24:68 0/0:0:0:0:0:39:0%:74:1E0:38:39:24:15:40 0/0:0:0:0:0:54:0%:99:1E0:40:54:33:21:55 0/0:0:0:0:0:34:0%:62:1E0:39:34:23:11:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:24 0/0:39:1:1:0:27:3.7%:41:5E-1:42:26:10:16:27 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:38:1:0:1:22:4.55%:31:5E-1:40:21:11:10:22 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:32 0/0:0:0:0:0:35:0%:67:1E0:37:35:24:11:35 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:29 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:17 0/0:0:0:0:0:41:0%:78:1E0:38:41:30:11:42 0/0:0:0:0:0:29:0%:55:1E0:39:29:19:10:29 0/0:0:0:0:0:44:0%:81:1E0:41:44:30:14:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:32 0/0:39:1:1:0:45:2.22%:73:5E-1:37:44:26:18:45 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:20:9:29 0/0:0:0:0:0:32:0%:59:1E0:37:32:22:10:34 0/0:0:0:0:0:37:0%:70:1E0:37:37:24:13:37 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:53:0%:99:1E0:39:53:30:23:53 0/0:0:0:0:0:27:0%:52:1E0:38:27:21:6:27 0/0:0:0:0:0:45:0%:85:1E0:40:45:29:16:45 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:17:0%:33:1E0:45:17:14:3:17 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:24:0%:44:1E0:37:24:16:8:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:38 0/0:0:0:0:0:26:0%:47:1E0:39:26:21:5:26 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:31:0%:59:1E0:38:31:24:7:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:22:7:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:24:6:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:39:1:1:0:21:4.76%:31:5E-1:41:20:13:7:21 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:43:0%:82:1E0:39:43:30:13:44 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:46 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:21 0/0:0:0:0:0:31:0%:59:1E0:36:31:23:8:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:26:10:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:23:7:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:23:10:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:31 0/0:0:0:0:0:30:0%:55:1E0:38:30:20:10:31 0/0:0:0:0:0:17:0%:33:1E0:41:17:12:5:17 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:40 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:37:29:19:10:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:19:7:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:27 0/0:0:0:0:0:42:0%:77:1E0:38:42:25:17:43 0/0:0:0:0:0:55:0%:99:1E0:37:55:36:19:56 0/0:0:0:0:0:26:0%:47:1E0:40:26:21:5:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:22:8:31 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:57 0/0:0:0:0:0:51:0%:97:1E0:38:51:31:20:51 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:24 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:43:0%:82:1E0:36:43:24:19:43 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:29 0/0:0:0:0:0:53:0%:99:1E0:38:53:42:11:54 0/0:0:0:0:0:37:0%:70:1E0:35:37:21:16:37 0/0:0:0:0:0:41:0%:78:1E0:37:41:22:19:41 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:30 0/0:0:0:0:0:39:0%:74:1E0:39:39:26:13:39 0/0:0:0:0:0:31:0%:59:1E0:36:31:22:9:31 0/0:0:0:0:0:42:0%:77:1E0:37:42:26:16:42 0/0:0:0:0:0:35:0%:67:1E0:37:35:28:7:36 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:34 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:32 0/0:39:1:1:0:35:2.86%:55:5E-1:38:34:22:12:36 0/0:0:0:0:0:48:0%:89:1E0:38:48:34:14:49 0/0:60:1:1:0:30:3.33%:44:5E-1:42:29:23:6:30 0/0:0:0:0:0:40:0%:74:1E0:38:40:26:14:40 0/0:0:0:0:0:41:0%:78:1E0:38:41:27:14:42 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:18:6:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:37:0%:70:1E0:38:37:25:12:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:21:10:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:22:10:32 0/0:0:0:0:0:40:0%:74:1E0:40:40:28:12:40 0/0:0:0:0:0:54:0%:99:1E0:39:54:32:22:55 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 MTB_anc 389158 . C G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|intergenic_region|MODIFIER|dcd_Rv0321-udgA_Rv0322|gene333-gene334|intergenic_region|gene333-gene334|||n.389158C>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:51:0%:97:1E0:44:51:27:24:51 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:39:0%:74:1E0:49:39:15:24:39 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:22 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:27:0%:52:1E0:48:27:9:18:27 0/0:0:0:0:0:41:0%:78:1E0:49:41:21:20:41 0/0:0:0:0:0:44:0%:81:1E0:47:44:22:22:46 0/0:0:0:0:0:12:0%:21:1E0:44:12:4:8:12 0/0:0:0:0:0:53:0%:99:1E0:45:53:30:23:53 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:19:0%:37:1E0:49:19:6:13:19 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:21:0%:40:1E0:51:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:52 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:34:0%:62:1E0:47:34:11:23:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:10:22:32 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:32:0%:59:1E0:50:32:13:19:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:6:17:23 0/0:0:0:0:0:44:0%:81:1E0:48:44:20:24:45 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:28 0/0:0:0:0:0:55:0%:99:1E0:48:55:23:32:55 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:36 0/0:0:0:0:0:48:0%:89:1E0:46:48:21:27:49 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:41 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:17 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:9:20:29 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:8:21:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:20:0%:36:1E0:48:20:7:13:20 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:14 0/0:0:0:0:0:51:0%:97:1E0:42:51:22:29:52 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:22:0%:40:1E0:50:22:13:9:22 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:47 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:47 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:42 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:60:0%:99:1E0:50:60:28:32:60 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:16:0%:29:1E0:51:16:8:8:16 0/0:0:0:0:0:24:0%:44:1E0:50:24:14:10:25 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:20:0%:36:1E0:49:20:6:14:20 0/0:0:0:0:0:41:0%:78:1E0:50:41:23:18:42 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:33 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:11:24:35 0/0:0:0:0:0:32:0%:59:1E0:49:32:22:10:32 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:32:0%:59:1E0:50:32:14:18:33 0/0:0:0:0:0:21:0%:40:1E0:47:21:5:16:21 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:41 0/0:0:0:0:0:20:0%:36:1E0:50:20:14:6:21 0/0:0:0:0:0:25:0%:48:1E0:50:25:17:8:25 0/0:0:0:0:0:35:0%:67:1E0:49:35:19:16:35 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:35 0/0:0:0:0:0:46:0%:85:1E0:42:46:19:27:47 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:52:0%:96:1E0:43:52:28:24:52 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:34 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/1:41:7:2:5:25:28%:23:4.8126E-3:42:18:10:8:25 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:33 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:18 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:25:12:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:19 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:35 0/0:0:0:0:0:48:0%:89:1E0:41:48:22:26:50 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:26 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:35 0/0:0:0:0:0:43:0%:82:1E0:39:43:17:26:43 0/0:0:0:0:0:55:0%:99:1E0:41:55:28:27:55 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:47 0/0:0:0:0:0:28:0%:51:1E0:43:28:5:23:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:54:0%:99:1E0:40:54:20:34:54 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:38 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:41:0%:78:1E0:39:41:20:21:42 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:43 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:40 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:42 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:33 0/0:0:0:0:0:47:0%:89:1E0:39:47:19:28:48 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:46 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:43 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:41 0/0:0:0:0:0:55:0%:99:1E0:41:55:32:23:56 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:48:0%:89:1E0:39:48:23:25:48 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:53 0/0:0:0:0:0:49:0%:93:1E0:41:49:26:23:49 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:45 0/0:0:0:0:0:16:0%:29:1E0:41:16:7:9:16 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:16:30:46 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 MTB_anc 392261 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|stop_gained&splice_region_variant|HIGH|Rv0325_Rv0325|gene337|transcript|Transcript_gene337|Coding|1/1|c.223C>T|p.Gln75*|223/225|223/225|75/74||WARNING_TRANSCRIPT_NO_STOP_CODON,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.392261C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|unknown|||n.392261C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:31:17:14:32:96.88%:99:1.8007E-17:37:1:0:1:33 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:49:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:52:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:51:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:60:35:25:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 396246 . A C . PASS AC=4;AF=0.013;AN=300;ANN=C|missense_variant|MODERATE|Rv0331_Rv0331|gene343|transcript|Transcript_gene343|Coding|1/1|c.46A>C|p.Thr16Pro|46/1167|46/1167|16/388||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.396246A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.396246A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:50 1/1:46:14:4:10:15:93.33%:69:1.0315E-7:38:1:0:1:15 0/0:0:0:0:0:59:0%:99:1E0:44:59:32:27:63 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:32 0/0:0:0:0:0:17:0%:33:1E0:36:17:8:9:20 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:40 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:31 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:42 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:43 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:46 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:19 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:28 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:32 0/0:0:0:0:0:17:0%:33:1E0:44:17:13:4:18 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:30 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:48 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:8:18:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:41 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:22 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:22 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:29 0/0:0:0:0:0:35:0%:62:1E0:40:34:19:15:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:40 0/0:38:1:1:0:26:3.85%:38:5E-1:39:25:17:8:29 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:42 0/0:38:1:0:1:31:3.23%:48:5E-1:40:30:18:12:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:13:25:42 0/0:0:0:0:0:57:0%:99:1E0:41:57:27:30:61 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:52 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:10:25:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:31 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:40 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:47 0/0:0:0:0:0:34:0%:63:1E0:39:33:16:17:36 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:48 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:41 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:23 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:43 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:23 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:39 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:43 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:29 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:50 0/0:0:0:0:0:46:0%:85:1E0:45:46:28:18:49 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:29 0/0:36:1:1:0:46:2.17%:73:5E-1:42:45:15:30:50 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:29 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:24 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:44 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:34 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:46 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:17 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:42 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:36 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:21 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:39 0/0:0:0:0:0:41:0%:74:1E0:40:40:15:25:42 0/0:0:0:0:0:15:0%:25:1E0:43:14:8:6:16 0/0:0:0:0:0:31:0%:59:1E0:37:31:17:14:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:29 0/0:0:0:0:0:28:0%:52:1E0:40:27:14:13:29 0/0:0:0:0:0:36:0%:66:1E0:37:36:14:22:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:39 0/0:0:0:0:0:53:0%:99:1E0:42:53:28:25:54 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:39 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:34 0/0:0:0:0:0:11:0%:22:1E0:51:11:7:4:12 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:45 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:38 0/0:0:0:0:0:50:0%:92:1E0:41:50:24:26:52 0/0:0:0:0:0:24:0%:44:1E0:38:24:15:9:26 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:33 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:35 0/0:0:0:0:0:22:0%:40:1E0:41:22:16:6:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:29 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:31 0/0:0:0:0:0:19:0%:37:1E0:35:19:5:14:26 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:25 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:21 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:38 0/0:0:0:0:0:26:0%:47:1E0:35:26:9:17:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:35 0/0:0:0:0:0:27:0%:52:1E0:36:27:16:11:31 0/0:0:0:0:0:34:0%:62:1E0:37:34:17:17:44 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:28 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:39 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:29 0/0:0:0:0:0:50:0%:93:1E0:41:49:19:30:56 0/0:0:0:0:0:43:0%:82:1E0:38:43:20:23:43 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:34 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:23 0/0:0:0:0:0:35:0%:67:1E0:37:35:16:19:44 0/0:0:0:0:0:31:0%:59:1E0:36:31:14:17:41 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:40 0/0:0:0:0:0:34:0%:62:1E0:35:34:14:20:37 0/0:0:0:0:0:27:0%:52:1E0:34:27:20:7:30 0/0:0:0:0:0:31:0%:59:1E0:37:31:11:20:37 0/0:0:0:0:0:23:0%:44:1E0:34:23:7:16:28 0/0:0:0:0:0:30:0%:55:1E0:35:30:12:18:33 0/0:0:0:0:0:30:0%:55:1E0:35:30:10:20:35 0/0:0:0:0:0:24:0%:44:1E0:38:24:17:7:29 0/0:0:0:0:0:28:0%:51:1E0:36:28:8:20:37 0/0:0:0:0:0:34:0%:62:1E0:32:34:11:23:38 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:39 0/0:0:0:0:0:43:0%:82:1E0:35:43:22:21:51 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:28 0/0:0:0:0:0:40:0%:74:1E0:37:40:20:20:44 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:44 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:29 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:49 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:29 0/0:0:0:0:0:39:0%:74:1E0:37:39:18:21:45 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:16 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:54 0/0:0:0:0:0:37:0%:70:1E0:37:37:20:17:44 0/0:0:0:0:0:33:0%:63:1E0:37:33:13:20:43 MTB_anc 397275 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0331_Rv0331|gene343|transcript|Transcript_gene343|Coding|1/1|c.1075G>C|p.Ala359Pro|1075/1167|1075/1167|359/388||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.397275G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.397275G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:36:30:17:13:31:96.77%:99:8.4556E-18:0:0:0:0:32 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:35:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:34:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:36:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:37:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:35:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:35:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:35:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:34:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:52:35:17:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 399018 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|rmlA_Rv0334|gene346|transcript|Transcript_gene346|Coding|1/1|c.361A>C|p.Lys121Gln|361/867|361/867|121/288||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.399018A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.399018A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:48:43:21:22:44 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:53:0%:99:1E0:45:53:25:28:53 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:36 0/0:0:0:0:0:43:0%:82:1E0:50:43:20:23:43 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:46 0/0:0:0:0:0:28:0%:51:1E0:51:28:15:13:28 0/0:0:0:0:0:55:0%:99:1E0:46:55:27:28:55 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:25:0%:48:1E0:50:25:14:11:27 0/0:0:0:0:0:52:0%:96:1E0:44:52:23:29:52 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:40:0%:74:1E0:46:40:24:16:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:24:0%:44:1E0:45:24:6:18:24 0/0:0:0:0:0:28:0%:51:1E0:47:28:9:19:28 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:44:0%:81:1E0:50:44:22:22:44 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:77:0%:99:1E0:48:77:37:40:77 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:43 0/0:0:0:0:0:45:0%:85:1E0:48:45:21:24:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:43:23:6:17:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:42 0/0:0:0:0:0:51:0%:97:1E0:46:51:21:30:52 0/0:0:0:0:0:20:0%:36:1E0:53:20:9:11:20 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:44:0%:81:1E0:44:44:29:15:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:23 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:36 0/0:0:0:0:0:28:0%:51:1E0:48:28:19:9:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:40 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:51 0/0:0:0:0:0:25:0%:48:1E0:49:25:8:17:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:13:22:35 0/0:0:0:0:0:56:0%:99:1E0:45:56:26:30:56 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:36:1:1:0:40:2.5%:62:5E-1:43:39:16:23:40 0/0:0:0:0:0:12:0%:21:1E0:50:12:7:5:12 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:43:0%:82:1E0:49:43:22:21:44 0/0:0:0:0:0:27:0%:52:1E0:52:27:18:9:27 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:29 0/0:0:0:0:0:42:0%:77:1E0:48:42:24:18:42 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:22 0/0:0:0:0:0:40:0%:74:1E0:51:40:17:23:40 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:20:0%:36:1E0:44:20:15:5:20 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:18 0/0:0:0:0:0:45:0%:85:1E0:43:45:27:18:45 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:39:0%:74:1E0:47:39:24:15:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:37 0/1:41:7:1:6:24:29.17%:23:4.7006E-3:44:17:7:10:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:25:0%:48:1E0:49:25:8:17:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:30:0%:55:1E0:50:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:48:38:17:21:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:43 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:46 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:40:0%:74:1E0:49:40:18:22:40 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:30 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:44 0/0:0:0:0:0:38:0%:70:1E0:44:38:12:26:39 0/0:0:0:0:0:58:0%:99:1E0:40:58:27:31:58 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:45:0%:85:1E0:46:45:14:31:46 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:68:0%:99:1E0:43:68:34:34:68 0/0:0:0:0:0:63:0%:99:1E0:45:63:34:29:64 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:57:0%:99:1E0:41:57:23:34:59 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:42 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:54 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:42 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:32 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:44 0/0:0:0:0:0:69:0%:99:1E0:38:69:36:33:69 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:34 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:47 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:47 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:10:18:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:21:0%:40:1E0:49:21:8:13:21 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:44:0%:81:1E0:47:44:27:17:44 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:57 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 MTB_anc 403551 . G A . PASS AC=10;AF=0.033;AN=300;ANN=A|missense_variant|MODERATE|Rv0338c_Rv0338c|gene350|transcript|Transcript_gene350|Coding|1/1|c.2291C>T|p.Pro764Leu|2291/2649|2291/2649|764/882||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.403551G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.403551G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:33:0%:63:1E0:38:33:10:23:34 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:10 0/0:0:0:0:0:41:0%:78:1E0:40:41:14:27:41 0/0:0:0:0:0:9:0%:18:1E0:39:9:5:4:11 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:20:0%:36:1E0:39:20:5:15:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:38:19:5:14:19 0/0:0:0:0:0:22:0%:40:1E0:36:22:7:15:22 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:25 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:14 0/0:0:0:0:0:35:0%:67:1E0:37:35:12:23:35 0/0:39:1:1:0:7:14.29%:8:5E-1:36:6:1:5:7 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:39:1:0:1:23:4.35%:34:5E-1:39:22:9:13:24 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:30 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:10 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:16 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:27 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:35 0/0:0:0:0:0:19:0%:37:1E0:42:19:4:15:19 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:25:0%:48:1E0:42:25:8:17:25 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:16 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:29 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:25 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:47:0%:89:1E0:37:47:17:30:47 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:38 0/0:0:0:0:0:45:0%:85:1E0:38:45:23:22:46 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:29 0/0:39:1:1:0:22:4.55%:31:5E-1:39:21:12:9:22 0/0:0:0:0:0:29:0%:55:1E0:40:29:6:23:30 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:38 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:14:0%:25:1E0:40:14:3:11:14 0/0:0:0:0:0:42:0%:77:1E0:39:42:14:28:44 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:21 0/0:0:0:0:0:29:0%:55:1E0:36:29:18:11:29 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:19 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:31 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:28 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:21 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:39:1:0:1:27:3.7%:41:5E-1:39:26:9:17:27 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:38 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:21 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:40:0%:74:1E0:40:40:12:28:41 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:17 0/0:38:1:0:1:35:2.86%:55:5E-1:40:34:14:20:35 0/0:0:0:0:0:14:0%:25:1E0:36:14:6:8:14 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:17 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:32 0/0:39:1:1:0:29:3.45%:45:5E-1:42:28:10:18:30 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:9 0/0:0:0:0:0:21:0%:40:1E0:41:21:5:16:22 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:34 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:17 0/0:0:0:0:0:21:0%:40:1E0:38:21:14:7:21 0/0:0:0:0:0:59:0%:99:1E0:40:59:29:30:60 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:26 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:20 0/0:0:0:0:0:30:0%:55:1E0:37:30:10:20:30 0/0:0:0:0:0:37:0%:70:1E0:37:37:13:24:37 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:31 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:17 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:18 0/0:0:0:0:0:21:0%:40:1E0:38:21:4:17:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:41 0/0:0:0:0:0:23:0%:44:1E0:40:23:7:16:24 0/0:0:0:0:0:41:0%:78:1E0:37:41:20:21:41 0/0:0:0:0:0:22:0%:40:1E0:40:22:7:15:22 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:31:0%:59:1E0:38:31:9:22:31 0/0:0:0:0:0:35:0%:67:1E0:38:35:14:21:35 0/0:0:0:0:0:38:0%:70:1E0:38:38:13:25:38 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:22 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:18 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:38:1:1:0:34:2.94%:51:5E-1:38:33:10:23:34 0/0:0:0:0:0:36:0%:66:1E0:37:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:35 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:27 0/0:0:0:0:0:12:0%:21:1E0:41:12:3:9:13 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:39 0/0:0:0:0:0:21:0%:40:1E0:37:21:5:16:23 0/0:0:0:0:0:31:0%:59:1E0:37:31:11:20:34 0/0:0:0:0:0:31:0%:59:1E0:39:31:21:10:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:36:0%:66:1E0:37:36:17:19:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:37:1:1:0:20:5%:27:5E-1:38:19:3:16:21 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:31 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:27 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:28 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:14 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:22 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:29 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:14:0%:25:1E0:41:14:7:7:14 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:37:0%:70:1E0:37:37:12:25:37 0/0:39:1:1:0:38:2.63%:58:5E-1:38:37:14:23:38 0/0:0:0:0:0:19:0%:37:1E0:38:19:3:16:19 0/0:0:0:0:0:31:0%:59:1E0:39:31:11:20:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:9:23:32 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:29 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:27 0/0:0:0:0:0:17:0%:33:1E0:41:17:5:12:17 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:19 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:37:0%:70:1E0:38:37:12:25:38 0/0:38:1:0:1:30:3.33%:44:5E-1:38:29:8:21:30 MTB_anc 403587 . G A . PASS AC=16;AF=0.053;AN=300;ANN=A|missense_variant|MODERATE|Rv0338c_Rv0338c|gene350|transcript|Transcript_gene350|Coding|1/1|c.2255C>T|p.Ala752Val|2255/2649|2255/2649|752/882||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.403587G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.403587G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:28:0%:51:1E0:37:28:8:20:28 0/0:60:1:1:0:10:10%:11:5E-1:40:9:4:5:10 0/0:0:0:0:0:33:0%:63:1E0:38:33:9:24:33 0/0:0:0:0:0:11:0%:22:1E0:38:11:2:9:11 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:17 0/0:0:0:0:0:17:0%:33:1E0:41:17:3:14:17 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:20 0/0:0:0:0:0:18:0%:32:1E0:37:18:4:14:18 0/0:0:0:0:0:19:0%:37:1E0:36:19:1:18:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:6:14:20 0/0:0:0:0:0:17:0%:33:1E0:39:17:5:12:17 0/0:0:0:0:0:25:0%:48:1E0:37:25:3:22:27 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:8 0/0:0:0:0:0:32:0%:59:1E0:37:32:10:22:33 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:23 0/0:0:0:0:0:26:0%:47:1E0:39:26:1:25:28 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:18 0/0:0:0:0:0:19:0%:37:1E0:36:19:8:11:20 0/0:0:0:0:0:12:0%:21:1E0:37:12:3:9:13 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:15 0/0:0:0:0:0:25:0%:48:1E0:36:25:7:18:25 0/0:0:0:0:0:30:0%:55:1E0:34:30:8:22:30 0/0:0:0:0:0:16:0%:29:1E0:40:16:3:13:16 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:26 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:30 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:20 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:15 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:23 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:26:0%:47:1E0:38:26:7:19:29 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:18 0/0:0:0:0:0:24:0%:44:1E0:41:24:8:16:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:23 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:18 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:24 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:16 0/0:0:0:0:0:41:0%:78:1E0:37:41:9:32:42 0/0:0:0:0:0:33:0%:63:1E0:39:33:9:24:34 0/0:0:0:0:0:33:0%:63:1E0:36:33:9:24:33 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:22 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:29 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:21 0/0:0:0:0:0:28:0%:51:1E0:36:28:1:27:28 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:21 0/0:38:1:1:0:29:3.45%:45:5E-1:34:28:8:20:29 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:26 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:29 0/0:0:0:0:0:30:0%:55:1E0:35:30:10:20:31 0/0:0:0:0:0:17:0%:33:1E0:35:17:5:12:19 0/0:0:0:0:0:16:0%:29:1E0:40:16:4:12:17 0/0:0:0:0:0:37:0%:70:1E0:35:37:14:23:38 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:35:24:6:18:24 0/0:0:0:0:0:16:0%:29:1E0:35:16:6:10:16 0/0:0:0:0:0:28:0%:51:1E0:35:28:8:20:29 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:28 0/0:0:0:0:0:20:0%:36:1E0:35:20:7:13:21 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:26 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:22 0/0:0:0:0:0:27:0%:52:1E0:35:27:5:22:29 0/0:0:0:0:0:19:0%:37:1E0:37:19:2:17:20 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:17 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:22 0/0:0:0:0:0:37:0%:70:1E0:37:37:9:28:37 0/0:0:0:0:0:14:0%:25:1E0:40:14:8:6:14 0/0:0:0:0:0:37:0%:70:1E0:36:37:7:30:37 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:14 0/0:0:0:0:0:16:0%:29:1E0:41:16:2:14:17 0/0:0:0:0:0:30:0%:55:1E0:37:30:10:20:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:9:0%:18:1E0:37:9:0:9:9 0/0:0:0:0:0:25:0%:48:1E0:39:25:6:19:26 0/0:0:0:0:0:33:0%:63:1E0:36:33:7:26:34 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:17 0/0:0:0:0:0:22:0%:40:1E0:35:22:6:16:23 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:7:17:25 0/0:0:0:0:0:14:0%:25:1E0:36:14:6:8:15 0/0:0:0:0:0:20:0%:36:1E0:35:20:10:10:20 0/0:0:0:0:0:43:0%:82:1E0:35:43:12:31:44 0/0:0:0:0:0:26:0%:47:1E0:35:26:13:13:26 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:36:28:5:23:28 0/0:0:0:0:0:30:0%:55:1E0:37:30:5:25:31 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:23 0/0:0:0:0:0:17:0%:33:1E0:37:17:3:14:17 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:18:0%:32:1E0:36:18:3:15:19 0/0:0:0:0:0:33:0%:63:1E0:37:33:13:20:34 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:15 0/0:0:0:0:0:24:0%:44:1E0:35:24:6:18:26 0/0:0:0:0:0:18:0%:32:1E0:37:18:4:14:18 0/0:0:0:0:0:37:0%:70:1E0:36:37:11:26:38 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 0/0:0:0:0:0:21:0%:40:1E0:36:21:4:17:22 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:25 0/0:0:0:0:0:30:0%:55:1E0:35:30:10:20:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:4:22:27 0/0:0:0:0:0:35:0%:67:1E0:36:35:9:26:35 0/0:0:0:0:0:30:0%:55:1E0:35:30:8:22:33 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:20 0/0:0:0:0:0:14:0%:25:1E0:36:14:6:8:15 0/0:34:1:0:1:18:5.56%:24:5E-1:39:17:5:12:18 0/0:0:0:0:0:24:0%:44:1E0:39:24:6:18:25 0/0:0:0:0:0:32:0%:59:1E0:37:32:8:24:33 1/1:36:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:11:0%:22:1E0:35:11:0:11:12 1/1:36:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:18:0%:32:1E0:35:18:3:15:19 0/0:0:0:0:0:35:0%:67:1E0:35:35:10:25:37 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:24 0/0:0:0:0:0:23:0%:44:1E0:34:23:7:16:26 0/0:0:0:0:0:14:0%:25:1E0:38:14:3:11:14 0/0:0:0:0:0:28:0%:51:1E0:36:28:10:18:30 0/0:0:0:0:0:34:0%:62:1E0:37:34:10:24:34 1/1:36:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:17:0%:33:1E0:36:17:1:16:19 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:26 0/0:0:0:0:0:20:0%:36:1E0:35:20:5:15:21 0/0:0:0:0:0:36:0%:66:1E0:36:36:6:30:36 0/0:0:0:0:0:19:0%:37:1E0:34:19:7:12:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:5:11:16 1/1:36:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:13 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:21:0%:40:1E0:35:21:8:13:22 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:16 0/0:0:0:0:0:14:0%:25:1E0:34:14:4:10:14 0/0:0:0:0:0:14:0%:25:1E0:36:14:3:11:14 0/0:0:0:0:0:32:0%:59:1E0:37:32:6:26:33 0/0:0:0:0:0:28:0%:51:1E0:35:28:8:20:29 0/0:0:0:0:0:17:0%:33:1E0:36:17:2:15:17 0/0:0:0:0:0:26:0%:47:1E0:35:26:1:25:27 0/0:0:0:0:0:28:0%:51:1E0:36:28:6:22:28 0/0:0:0:0:0:28:0%:51:1E0:34:28:8:20:28 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:18:0%:32:1E0:37:18:3:15:19 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:20 0/0:0:0:0:0:28:0%:51:1E0:36:28:9:19:28 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:17 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:28 0/0:0:0:0:0:33:0%:63:1E0:35:33:6:27:33 0/0:0:0:0:0:21:0%:40:1E0:36:21:1:20:21 MTB_anc 404566 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv0338c_Rv0338c|gene350|transcript|Transcript_gene350|Coding|1/1|c.1276T>C|p.Phe426Leu|1276/2649|1276/2649|426/882||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.404566A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.404566A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:42:55:29:26:56 0/0:0:0:0:0:18:0%:32:1E0:49:18:10:8:18 0/0:0:0:0:0:54:0%:99:1E0:47:54:21:33:55 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:44:0%:81:1E0:50:44:24:20:45 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:38 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:29:0%:55:1E0:50:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:15 0/0:0:0:0:0:35:0%:67:1E0:45:35:11:24:35 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:5:16:21 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:35 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:24 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:33:0%:63:1E0:49:33:13:20:34 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:51:37:22:15:37 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:38 0/0:0:0:0:0:74:0%:99:1E0:48:74:39:35:77 0/0:0:0:0:0:45:0%:85:1E0:48:45:22:23:45 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:18 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:24:15:39 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:44:0%:81:1E0:44:44:16:28:44 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/1:46:7:4:3:33:21.21%:22:5.4855E-3:44:26:10:16:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:52 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:11:0%:22:1E0:50:11:3:8:11 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:26 0/0:0:0:0:0:30:0%:55:1E0:52:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:10:21:31 0/0:0:0:0:0:15:0%:29:1E0:46:15:6:9:16 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:33 0/0:0:0:0:0:42:0%:77:1E0:48:42:20:22:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:34:1:1:0:24:4.17%:34:5E-1:46:23:9:14:24 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:21 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:36 0/0:0:0:0:0:37:0%:70:1E0:47:37:14:23:38 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:48 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:60:0%:99:1E0:43:60:27:33:61 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:12:30:43 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:19:9:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:40 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:49 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:44 0/0:0:0:0:0:41:0%:78:1E0:45:41:25:16:44 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:60:0%:99:1E0:41:60:27:33:62 0/0:0:0:0:0:61:0%:99:1E0:43:61:32:29:61 0/0:0:0:0:0:18:0%:32:1E0:49:18:7:11:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:26 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:49 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:60:0%:99:1E0:42:60:25:35:62 0/0:0:0:0:0:49:0%:93:1E0:39:49:23:26:51 0/0:0:0:0:0:40:0%:74:1E0:42:40:13:27:40 0/0:0:0:0:0:38:0%:70:1E0:39:38:26:12:38 0/0:32:1:1:0:41:2.44%:66:5E-1:41:40:18:22:43 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:36 0/0:0:0:0:0:55:0%:99:1E0:41:55:32:23:58 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:29 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:43 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:32 0/0:0:0:0:0:63:0%:99:1E0:39:63:34:29:63 0/0:0:0:0:0:55:0%:99:1E0:41:55:29:26:56 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:50:0%:92:1E0:41:50:22:28:50 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:49 0/0:0:0:0:0:62:0%:99:1E0:42:62:25:37:63 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 MTB_anc 412280 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|iniA_Rv0342|gene354|transcript|Transcript_gene354|Coding|1/1|c.1443G>T|p.Gln481His|1443/1923|1443/1923|481/640||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.412280G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.412280G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:17:8:9:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:47:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:53:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:49:17:32:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:63:33:30:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:39:31:8:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:14:15:30:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:54:27:27:55:100%:99:4.0229E-32:0:0:0:0:58 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 MTB_anc 414632 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|lpqJ_Rv0344c|gene356|transcript|Transcript_gene356|Coding|1/1|c.310G>A|p.Gly104Ser|310/561|310/561|104/186||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.414632C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.414632C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:42:50:31:19:51 0/0:0:0:0:0:25:0%:48:1E0:48:25:9:16:25 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:24 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:40 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:51 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:24 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:53:0%:99:1E0:41:53:20:33:53 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:26 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:16:0%:29:1E0:43:16:7:9:16 0/0:0:0:0:0:13:0%:25:1E0:47:13:9:4:14 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:30 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:19 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:35:1:0:1:56:1.79%:91:5E-1:44:55:29:26:57 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:23:0%:44:1E0:40:23:16:7:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:5:17:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:19:8:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:20:0%:36:1E0:49:20:7:13:21 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:51 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:29 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:53:0%:99:1E0:40:53:24:29:54 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:42:0%:77:1E0:39:42:25:17:42 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:53 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:60:1:1:0:25:4%:38:5E-1:46:24:11:13:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:38:0%:70:1E0:49:38:19:19:40 0/0:0:0:0:0:16:0%:29:1E0:42:16:7:9:16 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:27 0/0:0:0:0:0:55:0%:99:1E0:43:55:25:30:55 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:58:0%:99:1E0:42:58:30:28:58 0/0:0:0:0:0:20:0%:36:1E0:46:20:15:5:20 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:36 0/0:0:0:0:0:42:0%:77:1E0:41:42:27:15:42 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:38:0%:70:1E0:36:38:19:19:39 0/0:0:0:0:0:25:0%:48:1E0:39:25:8:17:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:17 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:18 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:33 0/0:0:0:0:0:52:0%:96:1E0:36:52:20:32:53 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:45:0%:85:1E0:39:45:30:15:46 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:25 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:35 0/0:0:0:0:0:23:0%:44:1E0:37:23:8:15:24 0/0:0:0:0:0:32:0%:59:1E0:37:32:15:17:35 0/0:0:0:0:0:39:0%:74:1E0:37:39:21:18:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:32 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:40 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:37:0%:70:1E0:38:37:16:21:37 0/0:0:0:0:0:46:0%:85:1E0:36:46:21:25:46 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:33 0/0:0:0:0:0:28:0%:51:1E0:36:28:10:18:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:42:0%:77:1E0:37:42:16:26:45 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:40:0%:74:1E0:38:40:21:19:40 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:33 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:45 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:41 0/0:0:0:0:0:48:0%:89:1E0:36:48:21:27:49 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:31 MTB_anc 414944 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|lpqJ_Rv0344c-Rv0345_Rv0345|gene356-gene357|intergenic_region|gene356-gene357|||n.414944G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:49:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:51 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:45:21:24:46:100%:99:9.6314E-27:0:0:0:0:48 1/1:43:34:18:16:35:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:36:18:18:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:50:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:45:21:24:46:97.83%:99:1.1441E-25:37:1:0:1:46 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:33:15:18:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:45:32:16:16:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:50:16:34:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 421450 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|dnaK_Rv0350|gene362|transcript|Transcript_gene362|Coding|1/1|c.1616A>G|p.Asp539Gly|1616/1878|1616/1878|539/625||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.421450A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.421450A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:61:30:31:61:100%:99:2.609E-36:0:0:0:0:61 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:38:17:21:39:97.44%:99:1.4697E-21:60:1:0:1:39 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:53:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:6:15:22:95.45%:99:1.0931E-11:37:1:1:0:22 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:60:24:36:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:59:36:23:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:54:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:18:8:10:19:94.74%:92:5.6585E-10:48:1:0:1:19 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:49:32:17:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:58:36:22:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:44:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:49:33:16:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:68:33:35:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:47:35:12:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 422745 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|dnaJ1_Rv0352|gene364|transcript|Transcript_gene364|Coding|1/1|c.294C>T|p.Gly98Gly|294/1188|294/1188|98/395||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.422745C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.422745C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:36 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:40:18:22:41:97.56%:99:9.3017E-24:0:0:0:0:50 1/1:35:24:11:13:24:100%:99:3.101E-14:0:0:0:0:29 1/1:34:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:34:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:28 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:36 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:13 1/1:35:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:34:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:35:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:21 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:16 1/1:34:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:35:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:35:15:20:36:97.22%:99:8.9137E-21:0:0:0:0:40 1/1:32:20:5:15:22:90.91%:99:7.2544E-12:0:0:0:0:26 1/1:35:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:35:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:34 1/1:41:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:32 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:34:26:11:15:27:96.3%:99:2.0165E-15:0:0:0:0:33 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:27:13:14:28:96.43%:99:5.1363E-16:0:0:0:0:36 1/1:35:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:35:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:39 1/1:36:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:41:19:22:42:97.62%:99:2.3541E-24:0:0:0:0:50 1/1:34:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:34 1/1:35:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:37 1/1:36:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:39 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:26 1/1:35:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:36:24:8:16:24:100%:99:3.101E-14:0:0:0:0:30 1/1:37:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:34:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:50 1/1:37:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:33:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:35:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:35:31:10:21:32:96.88%:99:2.1486E-18:0:0:0:0:38 1/1:35:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:36:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:35 1/1:35:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:36:27:11:16:28:96.43%:99:5.1363E-16:0:0:0:0:31 1/1:34:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:47 1/1:35:30:13:17:31:96.77%:99:8.4556E-18:0:0:0:0:34 1/1:34:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:45 1/1:36:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:44 1/1:35:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:36:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:42 1/1:31:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:16 1/1:36:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:33:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:28 1/1:36:15:7:8:16:93.75%:81:6.4467E-9:0:0:0:0:21 1/1:35:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:35:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:49 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:35:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:35:24:8:16:24:100%:99:3.101E-14:0:0:0:0:29 1/1:34:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:29 1/1:34:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:27 1/1:36:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:56 1/1:33:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:35:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:36:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:34:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:35:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:32 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:36:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:29 1/1:32:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:21 1/1:34:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:29 1/1:37:16:7:9:17:94.12%:87:1.6637E-9:0:0:0:0:19 1/1:34:34:12:22:35:97.14%:99:3.5146E-20:0:0:0:0:44 1/1:34:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:21 1/1:35:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:48 1/1:35:23:11:12:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:34:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:35:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:34:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:35:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:36 1/1:35:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:24 1/1:34:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:34:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:26 1/1:37:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:35:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:30 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:34:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:29:3:26:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:26 1/1:36:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:34:5:29:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:24:5:19:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:36 1/1:35:23:7:16:24:95.83%:99:1.2146E-13:0:0:0:0:27 1/1:36:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:47 1/1:36:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:39 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:25 1/1:35:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:35:33:10:23:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:35:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:34:34:5:29:34:100%:99:3.5146E-20:0:0:0:0:45 1/1:35:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:29 1/1:36:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:36:28:8:20:30:93.33%:99:1.3074E-16:0:0:0:0:34 1/1:36:25:4:21:26:96.15%:99:7.9107E-15:0:0:0:0:31 1/1:35:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:30 1/1:33:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:35:21:6:15:22:95.45%:99:1.8578E-12:0:0:0:0:25 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:31 1/1:35:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:44 1/1:36:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:36 1/1:34:24:5:19:24:100%:99:3.101E-14:0:0:0:0:35 1/1:35:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:34:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:27 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:30 1/1:37:24:8:16:25:96%:99:3.101E-14:0:0:0:0:32 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:26 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:23:10:13:24:95.83%:99:1.2146E-13:0:0:0:0:26 1/1:35:30:12:18:31:96.77%:99:8.4556E-18:0:0:0:0:42 1/1:35:40:7:33:41:97.56%:99:9.3017E-24:0:0:0:0:46 1/1:35:16:4:12:17:94.12%:87:1.6637E-9:0:0:0:0:20 MTB_anc 424320 . T TC . PASS AC=297;AF=0.990;AN=300;ANN=TC|frameshift_variant|HIGH|PPE7_Rv0354c|gene366|transcript|Transcript_gene366|Coding|1/1|c.374dupG|p.Ile126fs|374/426|374/426|125/141||,TC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.424320_424321insC||||||,TC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.424320_424321insC||||||;LOF=(PPE7_Rv0354c|gene366|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:68:30:38:69:97.14%:99:2.7243E-38:33:2:1:1:70 1/1:43:33:17:16:32:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:17:7:25:96%:99:2.0568E-13:33:1:1:0:25 1/1:47:29:16:13:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:21:15:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:52:35:17:53:98.11%:99:8.609E-30:32:1:0:1:53 1/1:46:19:11:8:19:95%:98:1.5234E-10:60:1:0:1:20 1/1:42:40:18:22:41:97.56%:99:9.8874E-23:31:1:1:0:41 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:25:16:9:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:18:8:26:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:43:21:12:9:19:100%:99:1.8578E-12:0:0:0:0:21 0/1:41:20:12:8:21:83.33%:91:6.3493E-10:41:4:2:2:24 1/1:43:22:8:14:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:40:29:20:9:30:93.55%:99:2.6212E-16:50:1:1:0:31 1/1:44:52:29:23:52:98.11%:99:8.609E-30:36:1:1:0:53 1/1:47:32:11:21:33:94.12%:99:2.2142E-17:35:2:1:1:34 1/1:46:37:16:21:38:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:45:34:16:18:37:91.89%:99:5.6582E-18:49:3:2:1:37 1/1:50:23:11:12:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:41:27:16:11:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:19:5:14:21:90.48%:93:4.7003E-10:46:2:1:1:21 1/1:44:36:18:18:36:94.74%:99:1.1316E-19:37:2:2:0:38 1/1:44:28:11:17:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:10:13:22:100%:99:1.2146E-13:0:0:0:0:23 0/1:42:17:11:6:21:80.95%:78:1.2848E-8:35:3:1:2:21 1/1:46:36:23:13:37:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:44:31:14:17:33:93.94%:99:8.2416E-17:32:2:1:1:33 1/1:47:39:22:17:39:97.5%:99:3.8137E-22:60:1:1:0:40 1/1:46:37:25:12:37:97.37%:99:5.6582E-21:37:1:1:0:38 1/1:43:22:11:11:23:95.65%:99:2.9149E-12:34:1:1:0:23 1/1:46:60:30:30:63:93.75%:99:7.5825E-33:35:3:1:2:64 1/1:44:44:24:20:45:95.65%:99:2.7459E-24:38:2:1:1:46 1/1:44:49:27:22:49:98%:99:5.0549E-28:60:1:1:0:50 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:21:17:38:97.44%:99:1.4697E-21:35:1:1:0:39 1/1:43:22:6:16:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:18:10:8:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:15:12:27:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:18:13:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:36:18:18:38:92.31%:99:4.2179E-19:33:3:1:2:39 1/1:43:40:20:20:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:37:15:22:38:94.87%:99:3.0128E-20:42:2:1:1:39 0/1:48:16:7:9:18:88.89%:76:2.0936E-8:47:2:2:0:18 1/1:42:32:17:15:33:94.12%:99:2.2142E-17:34:2:0:2:34 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:15:13:29:96.55%:99:9.9776E-16:37:1:1:0:30 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:47:24:23:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:26:13:13:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:43:25:15:10:25:96.15%:99:5.4444E-14:30:1:0:1:26 1/1:41:44:24:20:43:97.78%:99:4.4304E-25:37:1:1:0:45 1/1:48:38:18:20:40:95%:99:8.0088E-21:60:2:1:1:41 1/1:42:34:21:13:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:44:17:27:45:95.65%:99:2.7459E-24:35:2:0:2:46 1/1:49:24:13:11:23:100%:99:3.101E-14:0:0:0:0:24 1/1:43:46:21:25:45:95.83%:99:1.9036E-25:55:2:2:0:48 1/1:46:64:38:26:65:95.52%:99:6.0362E-36:33:2:1:1:67 1/1:46:19:12:7:20:95%:98:1.5234E-10:34:1:0:1:20 1/1:43:37:21:16:40:92.5%:99:1.1479E-19:34:3:2:1:40 1/1:52:19:12:7:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:46:24:13:11:25:92.31%:99:7.6222E-13:34:2:2:0:26 1/1:45:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:43:19:24:44:97.73%:99:1.7144E-24:37:1:0:1:44 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:35:15:20:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:39:29:16:13:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:20:9:11:22:90.91%:98:1.3117E-10:34:2:1:1:22 1/1:44:33:15:18:35:94.29%:99:5.9366E-18:48:2:1:1:36 1/1:49:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:38:18:20:39:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:43:34:20:14:31:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:17:18:34:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:42:51:29:22:53:96.23%:99:2.3675E-28:46:2:1:1:53 1/1:44:32:18:14:33:96.97%:99:4.7095E-18:33:1:1:0:33 1/1:48:27:13:14:28:93.1%:99:1.5465E-14:37:2:2:0:29 1/1:40:28:17:11:25:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:35:17:18:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:16:10:28:92.86%:99:5.6872E-14:47:2:2:0:28 1/1:43:19:10:9:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:43:19:24:43:93.48%:99:4.485E-23:35:3:0:3:46 1/1:45:45:26:19:45:97.83%:99:1.1441E-25:34:1:1:0:46 1/1:43:44:21:23:46:95.65%:99:2.7459E-24:46:2:2:0:46 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:49:26:23:46:98%:99:5.0549E-28:37:1:0:1:50 1/1:38:28:14:14:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:19:16:36:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:42:31:16:15:32:96.88%:99:1.8007E-17:33:1:1:0:32 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:14:19:35:94.29%:99:5.9366E-18:35:2:2:0:35 1/1:41:24:15:9:24:96%:99:2.0568E-13:60:1:0:1:25 1/1:43:32:15:17:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:21:11:33:94.12%:99:2.2142E-17:37:2:2:0:34 1/1:43:34:17:17:32:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:16:7:9:17:94.12%:81:7.7134E-9:32:1:0:1:17 1/1:45:22:12:10:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:14:16:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:45:24:12:12:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:43:25:12:13:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:42:41:21:20:41:97.62%:99:2.5612E-23:32:1:1:0:42 1/1:45:25:13:12:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:30:15:15:31:93.75%:99:3.0612E-16:45:2:1:1:32 1/1:44:38:20:18:38:97.44%:99:1.4697E-21:60:1:0:1:39 1/1:41:32:19:13:28:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:45:25:20:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:16:17:33:94.29%:99:5.9366E-18:46:2:0:2:35 1/1:41:18:8:10:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:41:61:33:28:61:96.83%:99:3.4466E-34:36:2:1:1:63 1/1:42:55:25:30:56:98.21%:99:1.4593E-31:36:1:1:0:56 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:42:23:19:39:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:38:15:23:37:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:38:17:21:38:95%:99:8.0088E-21:30:2:1:1:40 1/1:38:45:27:18:41:97.83%:99:1.1441E-25:24:1:1:0:47 1/1:40:48:25:23:46:100%:99:1.554E-28:0:0:0:0:48 1/1:41:40:19:21:39:95.24%:99:5.6346E-22:36:2:0:2:42 1/1:41:30:19:11:29:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:41:25:14:11:25:96.15%:99:5.4444E-14:30:1:0:1:26 1/1:40:35:21:14:32:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:22:17:37:100%:99:3.6742E-23:0:0:0:0:39 1/1:36:22:12:10:22:91.67%:99:2.9149E-12:25:1:1:0:24 1/1:43:33:16:17:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:63:35:28:64:96.92%:99:2.3257E-35:35:2:1:1:65 1/1:41:46:27:19:45:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:40:39:16:23:40:95.12%:99:2.1258E-21:47:2:0:2:41 1/1:43:55:25:30:56:98.21%:99:1.4593E-31:34:1:0:1:56 1/1:45:29:17:12:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:15:16:32:96.88%:99:1.8007E-17:37:1:0:1:32 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:19:16:37:94.59%:99:4.2437E-19:34:2:0:2:37 1/1:41:22:13:9:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:15:15:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:42:45:29:16:48:93.75%:99:3.2362E-24:42:3:1:2:48 1/1:42:67:32:35:66:100%:99:6.6743E-40:0:0:0:0:67 1/1:41:29:12:17:30:90.62%:99:3.5714E-15:36:3:0:3:32 MTB_anc 424932 . A T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE8_Rv0355c|gene367|transcript|Transcript_gene367|Coding|1/1|c.9748T>A|p.Phe3250Ile|9748/9903|9748/9903|3250/3300||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.424932A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.424932A>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:20:11:9:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:48:29:19:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:30:12:18:31:96.77%:99:6.8754E-17:32:1:0:1:31 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:67:34:33:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:18:9:9:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:24:16:8:25:96%:99:2.0568E-13:38:1:0:1:25 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:12:16:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:35:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:36:17:19:37:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 427310 . TTGCCGAGGTTTGCAC T . PASS AC=153;AF=0.513;AN=298;ANN=T|disruptive_inframe_deletion|MODERATE|PPE8_Rv0355c|gene367|transcript|Transcript_gene367|Coding|1/1|c.7355_7369delGTGCAAACCTCGGCA|p.Ser2452_Gly2456del|7369/9903|7355/9903|2452/3300||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.427311_427325delTGCCGAGGTTTGCAC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.427311_427325delTGCCGAGGTTTGCAC||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:29:9:20:35:80.56%:99:7.2821E-14:40:7:2:5:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:50:37:16:21:47:78.72%:99:2.6563E-17:50:10:7:3:47 0/1:42:16:6:10:21:72.73%:67:1.7905E-7:40:6:2:4:22 0/1:43:17:7:10:24:68%:69:1.0983E-7:39:8:1:7:28 0/1:45:19:7:12:29:65.52%:76:2.1144E-8:41:10:4:6:30 0/1:51:16:11:5:22:72.73%:67:1.7905E-7:44:6:3:3:22 0/1:40:11:2:9:14:73.33%:46:2.4988E-5:50:4:1:3:15 0/1:46:15:7:8:25:57.69%:57:1.7241E-6:39:11:5:6:26 0/1:49:24:14:10:34:70.59%:99:8.7205E-11:44:10:5:5:34 0/1:49:18:11:7:29:62.07%:71:7.6888E-8:46:11:2:9:29 0/1:44:21:5:16:32:63.64%:83:3.9837E-9:37:12:3:9:33 0/1:44:15:8:7:23:65.22%:60:9.5813E-7:41:8:2:6:23 0/1:44:28:11:17:33:82.35%:99:1.349E-13:35:6:2:4:35 1/1:46:19:9:10:21:90.48%:93:4.7003E-10:49:2:0:2:22 0/1:48:18:9:9:29:62.07%:71:7.6888E-8:42:11:4:7:29 0/1:42:16:9:7:26:59.26%:62:6.1806E-7:41:11:6:5:27 0/1:46:9:5:4:13:69.23%:36:2.2883E-4:41:4:2:2:13 0/1:45:15:5:10:21:75%:64:3.8543E-7:41:5:1:4:21 0/1:49:15:7:8:17:88.24%:71:7.3277E-8:47:2:1:1:17 0/1:49:17:7:10:22:77.27%:74:3.8368E-8:36:5:3:2:23 0/1:42:36:18:18:44:78.26%:99:8.6678E-17:38:10:5:5:47 0/1:49:18:9:9:31:58.06%:69:1.1154E-7:43:13:6:7:32 0/1:42:18:9:9:28:62.07%:71:7.6888E-8:41:11:4:7:31 0/1:42:18:11:7:21:85.71%:84:3.7603E-9:35:3:2:1:21 0/1:41:14:7:7:21:66.67%:56:2.1998E-6:45:7:2:5:21 0/1:46:22:9:13:25:88%:99:1.0078E-11:37:2:1:1:26 0/1:44:17:9:8:23:73.91%:72:5.7694E-8:36:6:1:5:23 0/1:46:20:8:12:24:80%:89:1.1273E-9:38:5:2:3:26 0/1:40:18:7:11:29:62.07%:72:6.1806E-8:44:10:5:5:29 0/1:46:13:9:4:21:61.9%:50:7.9741E-6:39:8:1:7:21 0/1:43:20:15:5:30:64.52%:80:9.197E-9:35:11:2:9:31 0/1:47:22:11:11:24:88%:99:2.5916E-11:60:3:0:3:25 0/1:38:23:12:11:30:74.19%:98:1.3219E-10:44:8:1:7:31 0/1:46:27:10:17:35:75%:99:2.0026E-12:42:9:4:5:37 0/1:42:29:16:13:41:70.73%:99:6.2804E-13:40:12:5:7:41 0/1:42:23:14:9:27:82.14%:99:3.103E-11:37:5:2:3:28 0/1:50:38:9:29:53:69.09%:99:1.3762E-16:43:17:5:12:56 0/1:43:33:21:12:39:80.49%:99:1.0617E-15:49:8:5:3:41 0/1:44:40:23:17:51:76.92%:99:2.0746E-18:40:12:3:9:52 0/1:41:28:11:17:39:70%:99:1.9197E-12:41:12:1:11:40 0/1:47:33:19:14:43:76.74%:99:2.9377E-15:39:10:1:9:43 0/1:45:11:5:6:15:73.33%:46:2.4988E-5:37:4:1:3:15 0/1:42:16:6:10:18:84.21%:73:4.357E-8:35:3:1:2:20 0/1:40:22:9:13:25:88%:99:2.5916E-11:44:3:2:1:26 0/1:40:25:10:15:32:75.76%:99:1.3235E-11:44:8:7:1:33 1/1:40:27:11:16:28:96.43%:99:3.7915E-15:38:1:1:0:28 0/1:43:30:12:18:36:83.33%:99:1.1855E-14:35:6:2:4:36 0/1:40:30:13:17:38:78.95%:99:3.7857E-14:41:8:4:4:38 0/1:49:27:13:14:37:75%:99:2.0026E-12:41:9:7:2:37 0/1:45:12:5:7:18:66.67%:48:1.4831E-5:41:6:3:3:18 0/1:44:17:10:7:29:58.62%:65:2.627E-7:40:12:6:6:31 0/1:45:15:7:8:23:65.22%:60:9.5813E-7:40:8:3:5:23 0/1:43:25:15:10:32:73.53%:99:1.9819E-11:46:9:4:5:35 0/1:43:24:9:15:29:82.76%:99:9.2544E-12:46:5:3:2:29 0/1:41:24:11:13:34:68.57%:99:1.1892E-10:40:11:6:5:35 0/1:42:18:10:8:22:81.82%:81:7.1052E-9:42:4:2:2:22 0/1:40:18:9:9:21:81.82%:81:7.1052E-9:37:4:2:2:22 0/1:42:22:9:13:28:78.57%:97:1.7583E-10:35:6:3:3:28 0/1:44:38:20:18:43:86.36%:99:6.0539E-19:37:6:3:3:45 0/1:46:20:9:11:32:62.5%:79:1.1508E-8:41:12:5:7:32 0/1:41:24:12:12:28:82.76%:99:9.2544E-12:41:5:1:4:29 0/1:42:23:9:14:33:69.7%:95:2.6558E-10:37:10:2:8:33 0/1:50:22:13:9:29:75.86%:95:2.7763E-10:37:7:3:4:29 0/1:45:30:18:12:40:71.43%:99:2.043E-13:42:12:4:8:42 0/1:46:43:25:18:54:78.18%:99:6.0866E-20:44:12:4:8:56 0/1:47:16:9:7:24:66.67%:64:3.2617E-7:38:8:2:6:25 0/1:46:27:10:17:35:77.14%:99:1.2926E-12:46:8:2:6:35 0/1:48:6:2:4:10:60%:22:5.418E-3:54:4:3:1:10 0/1:43:17:8:9:24:70.83%:70:8.1543E-8:43:7:3:4:24 0/1:54:22:10:12:32:68.75%:90:8.0292E-10:39:10:4:6:32 0/1:52:18:10:8:29:62.07%:71:7.6888E-8:48:11:6:5:31 0/1:49:16:12:4:18:88.89%:76:2.0936E-8:49:2:1:1:19 0/1:53:19:9:10:30:63.33%:75:2.6715E-8:40:11:4:7:30 0/1:44:29:13:16:37:74.36%:99:3.0194E-13:37:10:4:6:39 0/1:42:22:13:9:30:73.33%:93:4.1351E-10:41:8:6:2:30 0/1:41:20:10:10:23:86.96%:95:3.1579E-10:36:3:2:1:23 0/1:48:24:11:13:31:75%:99:4.1964E-11:43:8:5:3:32 0/1:38:18:8:10:28:62.07%:71:7.6888E-8:40:11:5:6:29 0/1:45:12:6:6:23:52.17%:44:3.4748E-5:37:11:5:6:23 0/1:42:24:11:13:30:77.42%:99:2.7115E-11:43:7:2:5:31 0/1:40:32:12:20:39:80%:99:3.51E-15:38:8:2:6:41 0/1:43:23:14:9:32:71.88%:97:1.9117E-10:39:9:5:4:32 1/1:50:28:14:14:30:93.33%:99:4.194E-15:36:2:1:1:31 0/1:45:17:10:7:23:73.91%:72:5.7694E-8:35:6:1:5:24 0/1:42:24:14:10:32:72.73%:99:6.1763E-11:41:9:8:1:34 0/1:48:21:9:12:33:63.64%:83:3.9837E-9:43:12:4:8:34 0/1:46:13:8:5:16:81.25%:57:1.6121E-6:51:3:0:3:16 0/1:54:26:11:15:33:78.79%:99:2.5824E-12:43:7:5:2:33 0/1:45:26:8:18:34:76.47%:99:2.5824E-12:46:7:7:0:34 0/1:45:24:14:10:31:77.42%:99:2.7115E-11:40:7:3:4:32 0/1:51:18:12:6:22:78.26%:79:1.1937E-8:40:5:2:3:23 0/1:38:25:14:11:33:73.53%:99:1.9819E-11:35:9:3:6:34 0/1:47:25:10:15:35:69.44%:99:3.936E-11:38:11:3:8:36 0/1:43:29:10:19:42:70.73%:99:6.2804E-13:40:12:6:6:43 0/1:50:11:4:7:14:78.57%:47:1.6951E-5:32:3:2:1:14 1/1:43:14:7:7:15:93.33%:69:1.0315E-7:35:1:0:1:16 0/1:44:18:8:10:24:75%:77:1.8413E-8:41:6:2:4:25 0/1:39:27:14:13:31:79.41%:99:7.9014E-13:39:7:2:5:34 0/1:46:28:10:18:35:80%:99:2.4048E-13:36:7:1:6:35 0/1:44:19:8:11:22:86.36%:89:1.0931E-9:38:3:1:2:22 0/1:48:15:9:6:18:83.33%:68:1.4655E-7:43:3:1:2:18 0/1:41:19:9:10:23:82.61%:86:2.1316E-9:36:4:2:2:24 0/1:43:22:11:11:29:75.86%:95:2.7763E-10:35:7:3:4:29 0/1:44:14:6:8:17:77.78%:60:8.0605E-7:35:4:1:3:21 0/1:44:14:9:5:22:63.64%:55:2.7817E-6:40:8:2:6:24 0/1:41:21:13:8:30:67.74%:86:2.4087E-9:41:10:1:9:31 0/1:48:25:11:14:29:86.21%:99:1.3609E-12:41:4:0:4:29 0/1:41:21:9:12:28:72.41%:88:1.2841E-9:39:8:2:6:29 0/1:47:18:10:8:27:66.67%:73:4.8354E-8:40:9:2:7:28 0/1:44:25:15:10:34:71.43%:99:2.8437E-11:40:10:4:6:35 0/1:43:23:9:14:31:74.19%:98:1.3219E-10:45:8:5:3:31 0/1:40:14:9:5:17:77.78%:63:4.8851E-7:36:3:2:1:18 0/1:43:22:10:12:30:70.97%:92:5.875E-10:38:9:6:3:32 0/1:38:23:11:12:32:71.88%:97:1.9117E-10:40:9:6:3:33 0/1:41:34:21:13:45:72.34%:99:2.1709E-15:37:12:5:7:47 0/1:42:30:10:20:42:68.18%:99:3.8642E-13:35:14:4:10:47 0/1:44:24:14:10:31:75%:99:4.1964E-11:39:8:3:5:33 0/1:37:13:7:6:20:65%:51:6.4422E-6:35:7:0:7:20 0/1:45:44:21:23:59:73.33%:99:1.121E-19:37:16:7:9:60 0/1:42:35:17:18:40:85.37%:99:2.5278E-17:38:6:0:6:41 0/1:41:15:6:9:20:75%:64:3.8543E-7:42:5:4:1:20 0/1:38:19:10:9:22:86.36%:89:1.0931E-9:38:3:1:2:22 0/1:43:24:15:9:39:61.54%:94:3.1797E-10:38:15:7:8:40 0/1:39:23:9:14:34:63.89%:92:5.9342E-10:35:13:4:9:38 0/1:41:31:18:13:36:86.11%:99:1.6935E-15:35:5:2:3:38 0/1:35:31:18:13:36:83.78%:99:3.4914E-15:35:6:1:5:38 0/1:39:31:18:13:44:70.45%:99:9.3274E-14:36:13:5:8:44 0/1:45:23:14:9:32:71.88%:97:1.9117E-10:34:9:4:5:34 0/1:38:20:10:10:24:83.33%:91:6.3493E-10:37:4:2:2:24 0/1:44:26:14:12:38:68.42%:99:1.7613E-11:37:12:5:7:39 0/1:44:24:11:13:35:68.57%:99:8.7205E-11:38:10:4:6:35 0/1:41:22:15:7:28:78.57%:97:1.7583E-10:41:6:5:1:29 0/1:41:24:13:11:35:68.57%:99:1.1892E-10:35:11:2:9:35 0/1:37:29:12:17:38:72.5%:99:4.43E-13:36:11:3:8:40 0/1:40:28:11:17:40:68.29%:99:2.6088E-12:41:13:6:7:41 0/1:38:45:26:19:66:67.16%:99:2.6877E-19:36:22:5:17:67 0/1:40:29:11:18:48:60.42%:99:3.7531E-12:38:19:3:16:48 0/1:42:32:18:14:42:76.19%:99:9.4228E-15:36:10:4:6:43 0/1:39:29:10:19:35:76.32%:99:1.977E-13:42:9:3:6:38 0/1:43:25:11:14:37:67.57%:99:5.2839E-11:36:12:4:8:37 0/1:43:13:6:7:21:61.9%:50:7.9741E-6:37:8:1:7:21 0/1:43:25:13:12:32:75.76%:99:1.3235E-11:38:8:5:3:34 0/1:40:25:12:13:35:71.43%:99:2.8437E-11:38:10:3:7:35 0/1:40:25:10:15:36:69.44%:99:3.936E-11:39:11:2:9:36 0/1:40:13:6:7:20:65%:51:6.4422E-6:40:7:3:4:20 0/1:44:25:12:13:32:78.12%:99:8.3928E-12:35:7:4:3:32 0/1:44:22:11:11:34:64.71%:89:1.0623E-9:35:11:3:8:35 0/1:47:33:16:17:47:70.21%:99:1.3848E-14:38:14:6:8:48 0/1:43:20:4:16:33:60.61%:78:1.4096E-8:37:13:7:6:33 MTB_anc 428698 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|PPE8_Rv0355c|gene367|transcript|Transcript_gene367|Coding|1/1|c.5982A>G|p.Ala1994Ala|5982/9903|5982/9903|1994/3300||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.428698T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.428698T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:66:33:33:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:31:14:17:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:31:18:13:32:96.88%:99:1.8007E-17:60:1:0:1:33 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:61:31:30:61:100%:99:2.609E-36:0:0:0:0:63 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:33:19:14:34:97.06%:99:1.2301E-18:39:1:1:0:35 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 428744 . A G . PASS AC=14;AF=0.047;AN=300;ANN=G|missense_variant|MODERATE|PPE8_Rv0355c|gene367|transcript|Transcript_gene367|Coding|1/1|c.5936T>C|p.Phe1979Ser|5936/9903|5936/9903|1979/3300||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.428744A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.428744A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:22:0%:40:1E0:49:22:8:14:22 0/0:0:0:0:0:66:0%:99:1E0:49:66:32:34:68 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:38 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:33:0%:63:1E0:49:33:20:13:34 0/0:0:0:0:0:16:0%:29:1E0:46:16:5:11:18 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:43 0/0:0:0:0:0:16:0%:29:1E0:51:16:6:10:17 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:36 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:21 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:30 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:22 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:15 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:22 0/0:0:0:0:0:16:0%:29:1E0:47:16:5:11:16 0/0:0:0:0:0:57:0%:99:1E0:45:57:31:26:57 0/0:0:0:0:0:35:0%:67:1E0:52:35:17:18:35 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:15:0%:29:1E0:48:15:8:7:16 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:14 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:24:0%:44:1E0:51:24:13:11:24 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:45:0%:85:1E0:47:45:23:22:45 0/0:0:0:0:0:40:0%:74:1E0:48:40:22:18:40 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:44 0/0:0:0:0:0:58:0%:99:1E0:46:58:32:26:58 0/0:0:0:0:0:45:0%:85:1E0:46:45:26:19:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:33 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:19 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:16:8:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:30 0/0:0:0:0:0:46:0%:85:1E0:48:46:27:19:46 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:17 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:33 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:48:20:14:6:20 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:43 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:17:7:24 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:47:0%:89:1E0:47:47:26:21:50 0/0:0:0:0:0:12:0%:21:1E0:48:12:6:6:12 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:17:0%:33:1E0:49:17:12:5:17 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:6:14:20 0/0:0:0:0:0:33:0%:63:1E0:50:33:18:15:33 0/0:37:1:0:1:35:2.86%:55:5E-1:43:34:15:19:37 0/0:0:0:0:0:23:0%:44:1E0:47:23:7:16:25 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:23:10:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:40 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:38 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:27:0%:52:1E0:50:27:13:14:28 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:47 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:30 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:32:0%:59:1E0:50:32:17:15:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:51:0%:97:1E0:43:51:31:20:51 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:7:20:29 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 1/1:45:31:17:14:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:13:0%:25:1E0:40:13:6:7:13 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:22 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:34 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:46 0/0:0:0:0:0:39:0%:74:1E0:42:39:12:27:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:66:0%:99:1E0:43:66:34:32:68 0/0:0:0:0:0:21:0%:40:1E0:47:21:7:14:22 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:25 0/0:0:0:0:0:44:0%:81:1E0:41:44:27:17:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:42 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:45 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:50 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:46:0%:85:1E0:38:46:28:18:48 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:33 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:42 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:41 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:0:0:0:0:58:0%:99:1E0:41:58:25:33:59 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:44 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:38 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:49 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:57:0%:99:1E0:42:57:32:25:59 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 MTB_anc 430756 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|PPE8_Rv0355c|gene367|transcript|Transcript_gene367|Coding|1/1|c.3924C>T|p.Ile1308Ile|3924/9903|3924/9903|1308/3300||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.430756G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.430756G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:53:17:36:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:52:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:48:20:13:7:21:95.24%:99:4.0873E-11:39:1:1:0:21 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:53:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 MTB_anc 430845 . C A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|PPE8_Rv0355c|gene367|transcript|Transcript_gene367|Coding|1/1|c.3835G>T|p.Val1279Phe|3835/9903|3835/9903|1279/3300||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.430845C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.430845C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:42 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:27 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:10:21:32 0/0:0:0:0:0:33:0%:63:1E0:49:33:14:19:34 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:36:0%:66:1E0:51:36:13:23:38 0/0:0:0:0:0:25:0%:48:1E0:50:25:9:16:25 0/0:0:0:0:0:33:0%:63:1E0:50:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:30 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:21 0/0:0:0:0:0:49:0%:93:1E0:43:49:18:31:50 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:19 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:23 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:18 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:45 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:21 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:34 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:15:0%:29:1E0:48:15:8:7:15 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:38 0/0:0:0:0:0:53:0%:99:1E0:48:53:30:23:55 0/0:0:0:0:0:54:0%:99:1E0:44:54:26:28:54 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:22 0/0:0:0:0:0:14:0%:25:1E0:48:14:5:9:15 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:17:6:24 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:41 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:18 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:20:0%:36:1E0:46:20:6:14:20 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:29 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:25 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:48:0%:89:1E0:44:48:25:23:50 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:16 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:15 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:27 0/0:0:0:0:0:30:0%:55:1E0:49:30:19:11:31 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:31 0/0:0:0:0:0:16:0%:29:1E0:55:16:8:8:16 0/0:0:0:0:0:32:0%:59:1E0:51:32:17:15:34 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:20 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:21 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:25:0%:48:1E0:49:25:6:19:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:42:0%:77:1E0:49:42:22:20:42 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:30 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:46 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:21 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:22 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:35 0/0:0:0:0:0:21:0%:40:1E0:41:21:16:5:22 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:23:12:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:42 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:41 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:41 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:26 0/0:0:0:0:0:44:0%:81:1E0:41:44:17:27:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:22 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:41 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:42 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:49 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:43 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:33 0/0:0:0:0:0:43:0%:82:1E0:40:43:23:20:46 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:33 0/0:0:0:0:0:32:0%:59:1E0:37:32:14:18:35 0/0:0:0:0:0:27:0%:52:1E0:38:27:7:20:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:58:0%:99:1E0:41:58:29:29:61 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:41 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:47 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:43 0/0:0:0:0:0:49:0%:93:1E0:41:49:21:28:49 0/0:37:1:0:1:21:4.76%:31:5E-1:42:20:11:9:21 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:54 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:55 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 MTB_anc 435190 . C T . PASS AC=298;AF=1.00;AN=298;ANN=T|synonymous_variant|LOW|Rv0356c_Rv0356c|gene368|transcript|Transcript_gene368|Coding|1/1|c.285G>A|p.Leu95Leu|285/645|285/645|95/214||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.435190C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.435190C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:22:16:6:23:95.65%:99:2.9149E-12:39:1:1:0:23 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:13:10:3:14:92.86%:64:3.7391E-7:39:1:0:1:14 1/1:37:20:14:6:21:95.24%:99:4.0873E-11:37:1:1:0:22 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:14:8:6:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:32:24:8:33:96.97%:99:4.7095E-18:36:1:0:1:34 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:33:22:11:34:97.06%:99:1.2301E-18:37:1:1:0:35 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:24:18:6:24:100%:99:3.101E-14:0:0:0:0:27 1/1:36:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:35:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:37:29:18:11:30:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:35:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 MTB_anc 438271 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0359_Rv0359|gene371|transcript|Transcript_gene371|Coding|1/1|c.754A>G|p.Thr252Ala|754/780|754/780|252/259||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.438271A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.438271A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:49:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:25:10:15:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:31:22:9:32:96.88%:99:2.1486E-18:0:0:0:0:34 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:19:13:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:52:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:10:12:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:40:25:15:41:97.56%:99:9.8874E-23:32:1:0:1:41 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:28 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:59:23:36:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 443277 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0365c_Rv0365c|gene377|transcript|Transcript_gene377|Coding|1/1|c.921T>G|p.Asp307Glu|921/1131|921/1131|307/376||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.443277A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.443277A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:52:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:47:32:15:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:49:33:16:49:100%:99:3.925E-29:0:0:0:0:50 1/1:37:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 444296 . C A . PASS AC=124;AF=0.413;AN=300;ANN=A|missense_variant|MODERATE|Rv0366c_Rv0366c|gene378|transcript|Transcript_gene378|Coding|1/1|c.520G>T|p.Gly174Trp|520/594|520/594|174/197||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.444296C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.444296C>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:45 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:23:0%:44:1E0:44:23:16:7:23 0/0:0:0:0:0:23:0%:44:1E0:39:23:7:16:23 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 1/1:51:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:12:0%:21:1E0:46:12:7:5:15 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:52:1:1:0:14:7.14%:17:5E-1:49:13:6:7:14 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:19:15:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:42:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:47 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 1/1:45:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:44 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:39:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:40 1/1:42:23:12:11:24:95.83%:99:7.7525E-13:60:1:0:1:25 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:33 1/1:43:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:37 0/0:0:0:0:0:67:0%:99:1E0:42:67:36:31:67 0/0:32:1:1:0:24:4.17%:34:5E-1:38:23:13:10:24 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:46 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:37:1:0:1:28:3.57%:41:5E-1:45:27:17:10:28 0/0:0:0:0:0:52:0%:96:1E0:42:52:30:22:55 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:30 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 1/1:50:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:36 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:18:8:10:19:94.74%:92:5.6585E-10:38:1:1:0:19 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:33 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:33 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:14 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:26 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:37:31:17:14:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:37 0/0:0:0:0:0:29:0%:55:1E0:35:29:19:10:30 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:22 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:50 0/0:0:0:0:0:43:0%:82:1E0:41:43:13:30:44 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:16:0%:29:1E0:41:16:5:11:18 0/0:0:0:0:0:40:0%:74:1E0:38:40:17:23:42 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:30 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:41 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:33 0/0:0:0:0:0:35:0%:67:1E0:38:35:10:25:36 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:24:11:37 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:37 0/0:60:1:0:1:29:3.45%:45:5E-1:37:28:15:13:32 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:34 1/1:38:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:53:0%:99:1E0:40:53:24:29:53 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:22 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:28:14:42 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 MTB_anc 445780 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0368c_Rv0368c|gene380|transcript|Transcript_gene380|Coding|1/1|c.746A>G|p.His249Arg|746/1212|746/1212|249/403||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.445780T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.445780T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:60:18:42:60:100%:99:1.035E-35:0:0:0:0:60 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:35:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:14:10:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:35:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:53:17:36:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:36:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:35:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 MTB_anc 446165 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0368c_Rv0368c|gene380|transcript|Transcript_gene380|Coding|1/1|c.361C>G|p.Gln121Glu|361/1212|361/1212|121/403||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.446165G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.446165G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:54:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:20:18:39:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:34:16:18:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:22:16:6:23:95.65%:99:2.9149E-12:39:1:1:0:24 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:30:14:16:31:96.77%:99:8.4556E-18:0:0:0:0:32 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:49:20:29:49:100%:99:3.925E-29:0:0:0:0:52 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:15:10:26:96.15%:99:5.4444E-14:37:1:0:1:26 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:62:38:24:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:37:16:21:38:97.37%:99:5.6582E-21:60:1:0:1:39 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 447442 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0370c_Rv0370c|gene382|transcript|Transcript_gene382|Coding|1/1|c.602A>G|p.Glu201Gly|602/897|602/897|201/298||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.447442T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.447442T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:53:22:31:54:100%:99:1.5943E-31:0:0:0:0:58 1/1:50:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:68:37:31:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:50:29:21:51:98.04%:99:9.9117E-30:0:0:0:0:52 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:14:12:27:96.3%:99:1.4382E-14:60:1:0:1:28 1/1:49:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:24:12:12:25:96%:99:2.0568E-13:34:1:0:1:25 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:47:27:20:48:100%:99:6.1512E-28:0:0:0:0:50 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:38:21:17:39:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:48:24:24:49:97.96%:99:1.554E-28:0:0:0:0:50 1/1:47:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:17:20:38:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:44:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:62:39:23:63:98.41%:99:1.0605E-35:37:1:0:1:63 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:63 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:39:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:39:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:55 1/1:40:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:36:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:36:43:23:20:44:97.73%:99:1.7144E-24:38:1:1:0:46 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:55 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 MTB_anc 454167 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0376c_Rv0376c|gene388|transcript|Transcript_gene388|Coding|1/1|c.206A>G|p.Tyr69Cys|206/1143|206/1143|69/380||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.454167T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.454167T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:39:20:19:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:25:13:12:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:44:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:29:18:11:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 455325 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0377_Rv0377|gene389|transcript|Transcript_gene389|Coding|1/1|c.905G>C|p.Arg302Pro|905/966|905/966|302/321||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.455325G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.455325G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:55:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:68:35:33:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:42:23:9:14:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:46:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:28:15:13:30:93.33%:99:1.3074E-16:0:0:0:0:30 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:51:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:36:13:23:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:43:20:23:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:41:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:55:31:24:56:98.21%:99:1.0149E-32:0:0:0:0:58 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:65:30:35:67:97.01%:99:1.0519E-38:0:0:0:0:68 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:57:32:25:59:96.61%:99:6.4572E-34:0:0:0:0:59 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:49:25:24:50:98%:99:3.925E-29:0:0:0:0:50 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 455329 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv0377_Rv0377|gene389|transcript|Transcript_gene389|Coding|1/1|c.909C>T|p.Gly303Gly|909/966|909/966|303/321||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.455329C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.455329C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:48:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:36:19:17:37:97.3%:99:2.1762E-20:38:1:1:0:39 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:68:34:34:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:52:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:48:30:10:20:31:96.77%:99:6.8754E-17:30:1:1:0:31 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:51:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:66:30:36:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 456877 . C T . PASS AC=124;AF=0.413;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0380c_Rv0380c-Rv0381c_Rv0381c|gene392-gene393|intergenic_region|gene392-gene393|||n.456877C>T||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:53:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:41 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:22:0%:40:1E0:49:22:9:13:22 1/1:51:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:38:1:1:0:23:4.35%:34:5E-1:43:22:14:8:23 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:48:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:49:2:2:0:32:6.25%:40:2.4603E-1:42:30:18:12:32 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:60:1:0:1:22:4.55%:31:5E-1:43:21:8:13:22 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:15:0%:29:1E0:43:15:9:6:15 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:18:0%:32:1E0:52:18:7:11:18 1/1:45:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:58 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:37 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:43 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 1/1:46:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:54:0%:99:1E0:44:54:29:25:54 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:59:0%:99:1E0:44:59:22:37:59 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:28:23:51 1/1:49:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:29 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:23:0%:44:1E0:51:23:10:13:23 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:48 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:54:0%:99:1E0:42:54:26:28:54 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:23 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:40 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:36:0%:66:1E0:49:36:15:21:36 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:39:0%:74:1E0:40:39:25:14:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:19:8:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:33 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:19 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:30 0/0:0:0:0:0:19:0%:37:1E0:49:19:10:9:19 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:38 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:42 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:17 0/0:0:0:0:0:49:0%:93:1E0:40:49:22:27:49 0/0:0:0:0:0:56:0%:99:1E0:43:56:28:28:57 0/0:0:0:0:0:27:0%:52:1E0:40:27:7:20:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:30 0/0:0:0:0:0:48:0%:89:1E0:38:48:23:25:49 0/0:0:0:0:0:49:0%:93:1E0:40:49:22:27:49 0/0:0:0:0:0:49:0%:93:1E0:39:49:22:27:49 0/0:0:0:0:0:43:0%:82:1E0:37:43:16:27:43 0/0:0:0:0:0:37:0%:70:1E0:38:37:21:16:37 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:39 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:27 0/0:0:0:0:0:51:0%:97:1E0:41:51:29:22:54 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:10:21:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 1/1:39:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:11:26:37 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:18 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:56:0%:99:1E0:43:56:33:23:56 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 1/1:40:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 467504 . G A . PASS AC=299;AF=0.997;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.467504G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.467504G>A||||||,A|intragenic_variant|MODIFIER|Rv0387c_Rv0387c|gene399|gene_variant|gene399|||n.467504G>A||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:50:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:48:38:18:20:39:97.44%:99:1.4697E-21:38:1:1:0:40 1/1:48:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:53:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:18:19:38:97.37%:99:5.6582E-21:38:1:1:0:39 1/1:44:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:47:20:7:13:21:95.24%:99:4.0873E-11:60:1:0:1:22 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:53:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:54:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:32 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:49:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:21:9:12:22:95.45%:99:1.0931E-11:38:1:0:1:24 1/1:38:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:28:15:13:29:96.55%:99:9.9776E-16:60:1:0:1:30 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:32:14:18:33:96.97%:99:4.7095E-18:38:1:0:1:33 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:38:31:13:18:32:96.88%:99:1.8007E-17:26:1:1:0:33 1/1:40:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 0/1:39:8:3:5:9:88.89%:36:2.0568E-4:33:1:0:1:10 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 MTB_anc 467507 . G GGC . PASS AC=299;AF=0.997;AN=300;ANN=GGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.467507_467508insGC||||||,GGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.467507_467508insGC||||||,GGC|intragenic_variant|MODIFIER|Rv0387c_Rv0387c|gene399|gene_variant|gene399|||n.467507_467508insGC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:49:38:18:20:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:48:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:47:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:25:14:11:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:21:12:9:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:43:15:9:6:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:43:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:16:9:7:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:52:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:20:13:7:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:44:16:28:42:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:28:13:15:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:37:18:19:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:42:11:6:5:10:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:17:11:6:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:15:13:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:50:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:43:25:12:13:27:89.29%:99:2.0853E-13:31:2:1:1:28 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:27:10:17:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:19:8:11:19:95%:98:1.5234E-10:60:1:1:0:20 1/1:38:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:25:6:19:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:29:11:18:30:96.67%:99:2.6212E-16:35:1:0:1:30 1/1:44:35:10:25:36:97.22%:99:8.3613E-20:33:1:0:1:36 1/1:46:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:20:20:41:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:43:47:26:21:48:97.92%:99:7.6145E-27:60:1:1:0:48 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:10:7:3:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:22:7:15:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:22:19:39:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:30:16:14:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:13:17:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:13:13:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:15:14:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:32:8:24:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:51:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:19:11:8:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:53:17:9:8:18:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:54:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:35:19:16:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:25:13:12:25:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:11:13:24:96%:99:2.0568E-13:32:1:0:1:25 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:36:14:22:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:30:13:17:29:93.75%:99:6.8754E-17:67:1:1:0:32 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:11:12:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:16:8:8:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:29:13:16:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:15:6:9:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:41:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:48:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:36:20:16:38:94.74%:99:1.1316E-19:49:2:1:1:38 1/1:40:23:9:14:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:38:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:27:15:12:28:93.1%:99:3.7915E-15:37:1:0:1:29 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:13:18:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:23:12:11:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:21:10:11:22:95.45%:99:1.0931E-11:39:1:1:0:22 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:29:11:18:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:14:10:23:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:15:14:30:96.67%:99:2.6212E-16:38:1:1:0:30 1/1:47:36:16:20:36:97.3%:99:2.1762E-20:37:1:1:0:37 1/1:42:33:18:15:34:97.06%:99:1.2301E-18:50:1:1:0:34 1/1:43:22:10:12:23:95.65%:99:2.9149E-12:34:1:1:0:23 1/1:35:14:3:11:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:24:13:11:23:100%:99:3.101E-14:0:0:0:0:24 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:31:12:19:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:25:6:19:25:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:43:31:13:18:30:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:39:22:8:14:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:44:22:22:42:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:38:15:23:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:17:8:9:18:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:42:21:9:12:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:29:8:21:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:17:9:8:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:40:34:9:25:32:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:31:12:19:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:26:9:17:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:42:21:5:16:19:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:22:9:13:24:91.67%:99:1.0078E-11:29:2:1:1:24 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:25:11:14:25:96.15%:99:5.4444E-14:24:1:1:0:26 1/1:41:29:8:21:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:9:3:6:9:90%:46:2.0568E-5:0:0:0:0:10 1/1:41:18:11:7:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:18:7:11:19:94.74%:92:5.6585E-10:33:1:0:1:19 MTB_anc 467508 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.467508C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.467508C>G||||||,G|intragenic_variant|MODIFIER|Rv0387c_Rv0387c|gene399|gene_variant|gene399|||n.467508C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:38:18:20:39:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:53:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:53:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:20:13:7:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:17:19:37:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:13:12:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:41:21:20:42:97.62%:99:2.5612E-23:32:1:0:1:42 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:53:17:9:8:18:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:54:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:36:20:16:38:94.74%:99:2.1762E-20:60:1:1:0:38 1/1:39:21:8:13:22:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:27:15:12:29:96.43%:99:3.7915E-15:35:1:0:1:29 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:42:21:10:11:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:15:14:30:96.67%:99:2.6212E-16:38:1:1:0:30 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:6:19:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:17:8:9:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:31:6:25:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:8:2:6:9:100%:41:7.77E-5:0:0:0:0:10 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 MTB_anc 467516 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.467516G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.467516G>C||||||,C|intragenic_variant|MODIFIER|Rv0387c_Rv0387c|gene399|gene_variant|gene399|||n.467516G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:7:25:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:45:40:13:27:41:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:46:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:52:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:48:17:4:13:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 MTB_anc 467526 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.467526C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.467526C>G||||||,G|intragenic_variant|MODIFIER|Rv0387c_Rv0387c|gene399|gene_variant|gene399|||n.467526C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:49:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:50:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:18:16:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:51 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:53:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:32:16:16:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:52:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:60:25:35:60:100%:99:1.035E-35:0:0:0:0:61 1/1:47:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:39:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:28:14:14:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 MTB_anc 468357 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|purT_Rv0389|gene400|transcript|Transcript_gene400|Coding|1/1|c.23G>A|p.Gly8Glu|23/1260|23/1260|8/419||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.468357G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.468357G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:38:19:19:39:97.44%:99:1.4697E-21:38:1:1:0:39 1/1:42:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:43:34:9:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:42:32:10:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:58:36:22:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:41:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:49:34:15:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 469656 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv0390_Rv0390|gene401|transcript|Transcript_gene401|Coding|1/1|c.66G>C|p.Ala22Ala|66/423|66/423|22/140||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.469656G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.469656G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:53:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:13:8:5:14:92.86%:64:3.7391E-7:32:1:1:0:14 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:41:22:19:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:63:21:42:63:100%:99:1.657E-37:0:0:0:0:65 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:38:16:22:39:97.44%:99:1.4697E-21:60:1:1:0:40 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:20:17:38:97.37%:99:5.7269E-22:0:0:0:0:40 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:34:17:17:35:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:51:30:21:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:41:19:22:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 470629 . C T . PASS AC=13;AF=0.043;AN=300;ANN=T|missense_variant|MODERATE|metZ_Rv0391|gene402|transcript|Transcript_gene402|Coding|1/1|c.620C>T|p.Pro207Leu|620/1221|620/1221|207/406||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.470629C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.470629C>T||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:50 0/0:0:0:0:0:18:0%:32:1E0:51:18:11:7:19 0/0:0:0:0:0:48:0%:89:1E0:49:48:26:22:48 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:33 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:22 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:42:0%:77:1E0:48:42:21:21:42 0/0:0:0:0:0:31:0%:59:1E0:54:31:17:14:31 0/0:0:0:0:0:52:0%:96:1E0:45:52:22:30:53 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 0/0:0:0:0:0:31:0%:59:1E0:52:31:21:10:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:59:0%:99:1E0:47:59:29:30:59 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:45:0%:85:1E0:46:45:20:25:45 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:21 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:34 0/0:60:1:0:1:45:2.22%:73:5E-1:42:44:21:23:45 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:45 0/0:0:0:0:0:53:0%:99:1E0:48:53:27:26:53 0/0:0:0:0:0:52:0%:96:1E0:46:52:21:31:52 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:41 0/0:0:0:0:0:32:0%:59:1E0:41:32:22:10:32 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:45 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:21 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:39:0%:74:1E0:50:39:17:22:39 0/0:0:0:0:0:21:0%:40:1E0:52:21:11:10:21 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:19:0%:37:1E0:48:19:13:6:20 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:25 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:44 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:30 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:50:0%:92:1E0:42:50:30:20:51 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:38 0/1:42:17:2:15:37:45.95%:61:6.9312E-7:48:20:6:14:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:45 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:15:0%:29:1E0:48:15:9:6:15 0/0:0:0:0:0:22:0%:40:1E0:47:22:5:17:22 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:35:0%:67:1E0:52:35:20:15:35 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:53:0%:99:1E0:53:53:23:30:53 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:42 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:0:0:0:0:45:0%:85:1E0:45:45:27:18:45 0/0:0:0:0:0:35:0%:67:1E0:48:35:20:15:35 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:15:0%:29:1E0:44:15:10:5:15 0/0:39:1:0:1:39:2.56%:62:5E-1:48:38:15:23:39 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:23 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:44 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:35 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:50 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:35:0%:67:1E0:46:35:23:12:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:46 0/0:0:0:0:0:49:0%:93:1E0:41:49:26:23:49 0/0:0:0:0:0:46:0%:85:1E0:39:46:23:23:47 0/0:0:0:0:0:54:0%:99:1E0:44:54:31:23:55 0/0:0:0:0:0:31:0%:59:1E0:44:31:22:9:31 0/0:0:0:0:0:59:0%:99:1E0:41:59:32:27:60 0/0:0:0:0:0:67:0%:99:1E0:44:67:36:31:69 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:57:0%:99:1E0:40:57:26:31:57 0/0:33:1:0:1:41:2.44%:66:5E-1:43:40:17:23:42 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:51 0/0:0:0:0:0:44:0%:81:1E0:40:44:34:10:46 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:29 0/0:0:0:0:0:43:0%:82:1E0:39:43:29:14:45 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:36 0/0:0:0:0:0:47:0%:89:1E0:38:47:26:21:48 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:39:1:0:1:69:1.45%:99:5E-1:39:68:38:30:70 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:49 0/0:0:0:0:0:51:0%:97:1E0:44:51:27:24:51 0/0:37:1:0:1:34:2.94%:51:5E-1:44:33:14:19:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:9:21:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:47:0%:89:1E0:41:47:20:27:47 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:14:25:40 0/0:60:1:0:1:58:1.72%:94:5E-1:44:57:28:29:58 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 MTB_anc 472701 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|intergenic_region|MODIFIER|ndhA_Rv0392c-Rv0393_Rv0393|gene403-gene404|intergenic_region|gene403-gene404|||n.472701G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:46:59:28:31:59 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:52:0%:96:1E0:47:52:24:28:52 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:53:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:21:17:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:16 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:25 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:19 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:49 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:17 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:39:0%:74:1E0:50:39:17:22:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:50:0%:92:1E0:47:50:28:22:51 0/0:33:1:0:1:59:1.69%:98:5E-1:46:58:31:27:59 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:49 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:45:0%:85:1E0:46:45:20:25:45 0/0:38:1:1:0:30:3.33%:44:5E-1:43:29:12:17:31 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:45:0%:85:1E0:48:45:25:20:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:60:1:1:0:46:2.17%:73:5E-1:45:45:18:27:46 0/0:37:1:1:0:34:2.94%:51:5E-1:42:33:18:15:35 0/0:0:0:0:0:52:0%:96:1E0:47:52:33:19:52 0/0:0:0:0:0:18:0%:32:1E0:48:18:7:11:18 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:47 0/0:35:1:1:0:26:3.85%:38:5E-1:44:25:11:14:26 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:46 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:33 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:38:1:1:0:44:2.27%:69:5E-1:46:43:23:20:46 0/0:0:0:0:0:56:0%:99:1E0:47:56:29:27:57 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:43 0/0:0:0:0:0:56:0%:99:1E0:43:56:20:36:56 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:42 0/0:0:0:0:0:53:0%:99:1E0:47:53:27:26:54 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:38:1:0:1:38:2.63%:58:5E-1:46:37:21:16:39 0/0:0:0:0:0:16:0%:29:1E0:50:16:6:10:16 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:40 0/0:0:0:0:0:38:0%:70:1E0:51:38:19:19:38 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:42:0%:77:1E0:50:42:21:21:42 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:34:0%:62:1E0:48:34:15:19:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:0:0:0:0:51:0%:97:1E0:49:51:27:24:51 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:41:0%:78:1E0:50:41:22:19:41 0/0:0:0:0:0:37:0%:70:1E0:51:37:16:21:37 0/0:0:0:0:0:56:0%:99:1E0:41:56:32:24:57 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:56:0%:99:1E0:43:56:25:31:56 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:22 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:47 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:36 0/1:46:11:6:5:36:30.56%:37:1.9879E-4:41:25:12:13:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:45:0%:85:1E0:44:45:17:28:45 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:31 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:48 0/0:0:0:0:0:39:0%:74:1E0:39:39:24:15:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:27 0/0:0:0:0:0:56:0%:99:1E0:40:56:25:31:56 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:43 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:38 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:61:0%:99:1E0:40:61:34:27:62 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:38 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:45 0/0:0:0:0:0:42:0%:77:1E0:39:42:25:17:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:18:28:48 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:40 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:54:0%:99:1E0:40:54:22:32:54 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:68:0%:99:1E0:38:68:34:34:69 0/0:0:0:0:0:52:0%:96:1E0:43:52:18:34:52 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:50 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:39 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:48 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:46 0/0:0:0:0:0:47:0%:89:1E0:41:47:30:17:47 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:47 MTB_anc 475341 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv0395_Rv0395|gene406|transcript|Transcript_gene406|Coding|1/1|c.402C>T|p.Ser134Ser|402/405|402/405|134/134||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.475341C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.475341C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:49 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:39:1:1:0:48:2.08%:76:5E-1:48:47:21:26:48 0/0:0:0:0:0:19:0%:37:1E0:47:19:6:13:19 0/0:0:0:0:0:22:0%:40:1E0:46:22:6:16:22 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:38:0%:70:1E0:52:38:17:21:39 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:37 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:43 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:50:0%:92:1E0:46:50:22:28:52 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:14:26:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:22 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:25 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:24 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:18:0%:32:1E0:50:18:7:11:18 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:31 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:24 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:41:0%:78:1E0:51:41:23:18:41 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:46 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:40 0/0:0:0:0:0:30:0%:55:1E0:46:30:22:8:30 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:42 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:39 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:39 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:39 0/0:34:1:1:0:42:2.38%:66:5E-1:45:41:18:23:42 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:21:0%:40:1E0:53:21:7:14:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:28 0/0:39:1:0:1:23:4.35%:34:5E-1:51:22:13:9:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:49 0/0:0:0:0:0:21:0%:40:1E0:45:21:15:6:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:43 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:36 0/0:0:0:0:0:32:0%:59:1E0:51:32:20:12:32 0/0:0:0:0:0:35:0%:67:1E0:50:35:20:15:35 0/0:0:0:0:0:55:0%:99:1E0:45:55:21:34:55 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:16 0/0:0:0:0:0:25:0%:48:1E0:48:25:17:8:25 0/0:60:1:1:0:34:2.94%:51:5E-1:46:33:10:23:35 0/0:0:0:0:0:37:0%:70:1E0:52:37:17:20:37 0/0:0:0:0:0:15:0%:29:1E0:51:15:10:5:15 0/0:0:0:0:0:40:0%:74:1E0:49:40:22:18:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:38:0%:70:1E0:48:38:12:26:38 0/0:0:0:0:0:42:0%:77:1E0:49:42:23:19:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:55:0%:99:1E0:43:55:23:32:55 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:32:0%:59:1E0:50:32:19:13:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:12:24:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:47 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:11:21:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:44 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:44 0/0:0:0:0:0:32:0%:59:1E0:47:32:10:22:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:14:27:42 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:35 0/0:0:0:0:0:48:0%:89:1E0:40:48:22:26:51 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 0/0:0:0:0:0:62:0%:99:1E0:45:62:30:32:62 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:29 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:52 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:45 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:45 0/0:0:0:0:0:47:0%:89:1E0:41:47:20:27:47 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:50 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:47 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:45 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:48 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:47 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:37 0/0:0:0:0:0:49:0%:93:1E0:40:49:24:25:50 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:44 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:45 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:29 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:43 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:16:0%:29:1E0:46:16:11:5:16 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:10:25:36 0/0:0:0:0:0:48:0%:89:1E0:39:48:21:27:48 0/0:0:0:0:0:41:0%:78:1E0:45:41:25:16:42 MTB_anc 476545 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv0397A_Rv0397A|gene409|transcript|Transcript_gene409|Coding|1/1|c.152T>G|p.Ile51Arg|152/249|152/249|51/82||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.476545T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.476545T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:42:52:30:22:55 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:58:0%:99:1E0:47:58:29:29:58 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:40 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:41 0/0:0:0:0:0:27:0%:52:1E0:50:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:31 0/0:0:0:0:0:25:0%:48:1E0:50:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:24:11:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:40 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:31 0/0:0:0:0:0:34:0%:62:1E0:50:34:16:18:34 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:21 0/0:0:0:0:0:18:0%:32:1E0:52:18:7:11:18 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:48 0/0:0:0:0:0:30:0%:55:1E0:51:30:16:14:30 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:50 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:22:0%:40:1E0:50:22:14:8:23 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:21:0%:40:1E0:48:21:7:14:21 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:39:0%:74:1E0:48:39:25:14:39 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:61:0%:99:1E0:47:61:28:33:61 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:49 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:44:0%:81:1E0:46:44:28:16:45 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:24:10:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:39 0/0:0:0:0:0:48:0%:89:1E0:49:48:24:24:49 0/0:0:0:0:0:23:0%:44:1E0:51:23:17:6:23 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:45 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:23:8:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:43:0%:82:1E0:47:43:26:17:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:37 0/0:0:0:0:0:51:0%:97:1E0:51:51:25:26:52 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:56:0%:99:1E0:44:56:31:25:57 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:36:0%:66:1E0:48:36:14:22:36 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:18 0/0:0:0:0:0:21:0%:40:1E0:47:21:15:6:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:54:27:9:18:27 0/0:0:0:0:0:38:0%:70:1E0:49:38:22:16:38 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:45 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:37 0/0:0:0:0:0:33:0%:63:1E0:53:33:20:13:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:20:1:0:1:28:3.57%:41:5E-1:43:27:13:14:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:15:0%:29:1E0:47:15:8:7:15 0/0:0:0:0:0:43:0%:82:1E0:48:43:28:15:44 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:36 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:47 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:38 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:24 0/0:0:0:0:0:51:0%:97:1E0:42:51:29:22:52 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:32 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:43 0/0:0:0:0:0:14:0%:25:1E0:42:14:7:7:15 0/0:0:0:0:0:72:0%:99:1E0:42:72:37:35:72 0/0:0:0:0:0:66:0%:99:1E0:41:66:25:41:66 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:42 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:41 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:46 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:36 0/0:0:0:0:0:50:0%:92:1E0:41:50:22:28:50 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:39 0/0:0:0:0:0:37:0%:70:1E0:39:37:14:23:38 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:50:0%:92:1E0:38:50:28:22:53 0/0:0:0:0:0:49:0%:93:1E0:41:49:31:18:50 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:19 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:51 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 MTB_anc 478686 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|fadE7_Rv0400c|gene412|transcript|Transcript_gene412|Coding|1/1|c.1068G>A|p.Leu356Leu|1068/1188|1068/1188|356/395||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.478686C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.478686C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:53:30:11:19:31:96.77%:99:8.4556E-18:0:0:0:0:32 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:62:26:36:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:47:25:22:48:97.92%:99:7.6145E-27:37:1:0:1:48 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:44:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:60:31:29:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:60:26:34:60:100%:99:1.035E-35:0:0:0:0:61 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 MTB_anc 485254 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|fadD30_Rv0404|gene416|transcript|Transcript_gene416|Coding|1/1|c.1278A>C|p.Arg426Arg|1278/1758|1278/1758|426/585||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.485254A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.485254A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:51:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:21:12:9:22:95.45%:99:1.0931E-11:38:1:0:1:22 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:51:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:48:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:38:18:20:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:31:16:15:32:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:52:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:53:16:37:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:28 1/1:47:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:66:27:39:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:61:35:26:61:100%:99:2.609E-36:0:0:0:0:62 1/1:40:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:45:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 487852 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|pks6_Rv0405|gene417|transcript|Transcript_gene417|Coding|1/1|c.2122C>G|p.Leu708Val|2122/4209|2122/4209|708/1402||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.487852C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.487852C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:55:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:47:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:42:28:13:15:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:50:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:38:22:16:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:60:30:30:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:43:33:10:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 489073 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|pks6_Rv0405|gene417|transcript|Transcript_gene417|Coding|1/1|c.3343C>G|p.Leu1115Val|3343/4209|3343/4209|1115/1402||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.489073C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.489073C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:54:20:34:55:98.18%:99:4.0229E-32:0:0:0:0:55 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:22:5:17:23:95.65%:99:2.9149E-12:33:1:0:1:24 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:49:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:39:24:15:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:48:21:27:49:97.96%:99:1.9625E-27:37:1:0:1:49 1/1:44:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:67:24:43:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:72:30:42:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:18:16:35:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:45:25:20:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 489076 . T A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|pks6_Rv0405|gene417|transcript|Transcript_gene417|Coding|1/1|c.3346T>A|p.Phe1116Ile|3346/4209|3346/4209|1116/1402||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.489076T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.489076T>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:43:54:21:33:56 0/0:0:0:0:0:19:0%:37:1E0:53:19:9:10:20 0/0:0:0:0:0:49:0%:93:1E0:48:49:17:32:49 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:26:0%:47:1E0:46:26:7:19:26 0/0:0:0:0:0:37:0%:70:1E0:51:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:43 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:42 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:24:0%:44:1E0:50:24:17:7:24 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:20 0/0:0:0:0:0:21:0%:40:1E0:43:21:4:17:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:47:0%:89:1E0:43:47:18:29:47 0/0:0:0:0:0:33:0%:63:1E0:49:33:22:11:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:25:0%:48:1E0:43:25:7:18:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:32 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:52 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:11:21:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:39 0/0:0:0:0:0:43:0%:82:1E0:49:43:24:19:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:44:0%:81:1E0:50:44:15:29:44 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:41 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:49 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:19 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:34 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:48 0/0:0:0:0:0:55:0%:99:1E0:45:55:23:32:56 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:37 0/0:0:0:0:0:19:0%:37:1E0:46:19:5:14:19 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:31 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:44 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:40 0/0:0:0:0:0:65:0%:99:1E0:47:65:24:41:67 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:36 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:34 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:71:0%:99:1E0:43:71:30:41:73 0/0:21:1:1:0:37:2.7%:59:5E-1:44:36:14:22:37 0/1:46:26:17:9:38:68.42%:99:1.7613E-11:48:12:10:2:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:45:0%:85:1E0:49:45:20:25:45 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:37:0%:70:1E0:52:37:15:22:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:43 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:37 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:44:23:6:17:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:43 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:9:24:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:28 0/0:0:0:0:0:25:0%:48:1E0:51:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:23 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:51 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:20:0%:36:1E0:44:20:6:14:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:44 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:27 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:46 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:42 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:51 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:53:0%:99:1E0:42:53:28:25:53 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:52 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:21:0%:40:1E0:45:21:6:15:22 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:33 0/0:0:0:0:0:57:0%:99:1E0:41:57:29:28:57 0/0:0:0:0:0:44:0%:81:1E0:40:44:17:27:46 0/0:0:0:0:0:43:0%:82:1E0:44:43:15:28:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:30 0/0:0:0:0:0:50:0%:92:1E0:43:50:22:28:50 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:30 0/0:0:0:0:0:49:0%:93:1E0:40:49:21:28:51 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:38:0%:70:1E0:39:38:15:23:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:38 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:49 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:54 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:44 0/0:0:0:0:0:52:0%:96:1E0:40:52:26:26:52 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:48 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:41 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:46 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:40 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:0:0:0:0:50:0%:92:1E0:43:50:21:29:51 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:41 MTB_anc 489205 . G A . PASS AC=64;AF=0.213;AN=300;ANN=A|missense_variant|MODERATE|pks6_Rv0405|gene417|transcript|Transcript_gene417|Coding|1/1|c.3475G>A|p.Asp1159Asn|3475/4209|3475/4209|1159/1402||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.489205G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.489205G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:45:59:22:37:59 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 1/1:47:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:63 0/0:0:0:0:0:49:0%:93:1E0:46:49:26:23:49 0/0:0:0:0:0:40:0%:74:1E0:47:40:15:25:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:35 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:62:0%:99:1E0:47:62:31:31:63 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:43 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:36 0/0:0:0:0:0:38:0%:70:1E0:51:38:19:19:38 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:22 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:27 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:52:0%:96:1E0:46:52:26:26:52 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:9:23:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:8:19:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:37 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:44 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:34 1/1:47:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:38 0/0:0:0:0:0:46:0%:85:1E0:47:46:18:28:47 0/0:0:0:0:0:51:0%:97:1E0:46:51:20:31:51 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:48:0%:89:1E0:47:48:22:26:48 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:45:0%:85:1E0:46:45:18:27:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:31 0/0:0:0:0:0:53:0%:99:1E0:45:53:25:28:53 0/0:39:1:1:0:60:1.67%:98:5E-1:44:59:29:30:60 0/0:0:0:0:0:37:0%:70:1E0:51:37:15:22:37 0/0:0:0:0:0:41:0%:78:1E0:46:41:18:23:43 0/0:0:0:0:0:26:0%:47:1E0:50:26:10:16:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:10:21:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 1/1:44:36:19:17:37:97.3%:99:2.1762E-20:36:1:0:1:37 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:42 0/0:0:0:0:0:56:0%:99:1E0:47:56:26:30:57 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 0/0:0:0:0:0:33:0%:63:1E0:50:33:16:17:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:11:26:38 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:23 0/0:0:0:0:0:68:0%:99:1E0:46:68:24:44:68 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:44:0%:81:1E0:48:44:26:18:44 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:43 0/0:0:0:0:0:33:0%:63:1E0:49:33:20:13:34 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:40 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:22 0/0:0:0:0:0:37:0%:70:1E0:50:37:15:22:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:41:0%:78:1E0:49:41:15:26:41 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:33 1/1:45:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:36:0%:66:1E0:48:36:15:21:36 1/1:45:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:43 0/0:38:1:1:0:36:2.78%:55:5E-1:45:35:15:20:36 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:50 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:36 0/0:60:1:1:0:43:2.33%:70:5E-1:44:42:18:24:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:30 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:8:19:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:43 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:42 0/0:0:0:0:0:37:0%:70:1E0:47:37:14:23:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:42 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:47 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:42 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:64:0%:99:1E0:41:64:32:32:65 0/0:0:0:0:0:52:0%:96:1E0:43:52:26:26:52 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:47:27:7:20:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 1/1:41:45:21:24:47:95.74%:99:7.2338E-25:36:2:2:0:50 1/1:45:58:20:38:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:39:48:15:33:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:39 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:30:0%:55:1E0:39:30:8:22:32 0/0:0:0:0:0:62:0%:99:1E0:42:62:32:30:64 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 0/0:33:1:0:1:45:2.22%:73:5E-1:41:44:17:27:48 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:38 0/0:0:0:0:0:46:0%:85:1E0:45:46:17:29:46 0/0:0:0:0:0:53:0%:99:1E0:39:53:26:27:55 0/0:0:0:0:0:57:0%:99:1E0:45:57:29:28:57 0/0:0:0:0:0:46:0%:85:1E0:47:46:23:23:46 0/0:0:0:0:0:58:0%:99:1E0:41:58:28:30:58 0/0:0:0:0:0:49:0%:93:1E0:46:49:23:26:50 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:52:0%:96:1E0:41:52:23:29:52 0/0:0:0:0:0:52:0%:96:1E0:44:52:19:33:52 0/0:0:0:0:0:43:0%:82:1E0:41:43:15:28:43 MTB_anc 491591 . A T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|fgd1_Rv0407|gene419|transcript|Transcript_gene419|Coding|1/1|c.809A>T|p.Lys270Met|809/1011|809/1011|270/336||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.491591A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|delamanid_PA-824|||n.491591A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.491591A>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:53:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:49:19:30:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:52:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:70:34:36:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:46:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:53:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:52:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:39:25:13:12:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:40:63:31:32:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:48:20:28:48:100%:99:1.554E-28:0:0:0:0:52 1/1:39:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:55:19:36:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:66:32:34:67:98.51%:99:4.5385E-38:39:1:1:0:67 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 491742 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|fgd1_Rv0407|gene419|transcript|Transcript_gene419|Coding|1/1|c.960C>T|p.Phe320Phe|960/1011|960/1011|320/336||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.491742C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|delamanid_PA-824|||n.491742C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.491742C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:48:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:67:29:38:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:53:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:49:19:30:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:57:37:20:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:63:32:31:63:100%:99:1.657E-37:0:0:0:0:64 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:43:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 492150 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|pta_Rv0408|gene420|transcript|Transcript_gene420|Coding|1/1|c.365C>G|p.Ala122Gly|365/2073|365/2073|122/690||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.492150C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.492150C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:52:24:20:4:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:26:18:8:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:60:35:25:60:100%:99:1.035E-35:0:0:0:0:61 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:17:10:7:18:94.44%:86:2.0936E-9:37:1:1:0:18 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:21:17:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:46:27:14:13:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:58:27:31:59:98.31%:99:1.6283E-34:0:0:0:0:59 1/1:47:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:51:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:50 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:30:19:11:31:96.77%:99:8.4556E-18:0:0:0:0:32 MTB_anc 498531 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0412c_Rv0412c|gene424|transcript|Transcript_gene424|Coding|1/1|c.1089C>T|p.Ala363Ala|1089/1320|1089/1320|363/439||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.498531G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.498531G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:51:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:53:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:51:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:52:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:52:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:46:34:17:17:35:97.14%:99:3.2089E-19:32:1:0:1:35 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:62:37:25:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:63:25:38:63:100%:99:1.657E-37:0:0:0:0:65 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 505520 . CT C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|frameshift_variant|HIGH|lpqM_Rv0419|gene431|transcript|Transcript_gene431|Coding|1/1|c.440delT|p.Phe147fs|440/1497|440/1497|147/498||INFO_REALIGN_3_PRIME,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.505521delT||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.505521delT||||||;HET=0;LOF=(lpqM_Rv0419|gene431|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:42:45:27:18:46 0/0:0:0:0:0:15:0%:29:1E0:53:15:7:8:15 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:17 0/0:0:0:0:0:35:0%:67:1E0:50:35:20:15:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:28 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:42 0/0:0:0:0:0:39:0%:74:1E0:49:39:20:19:39 0/0:0:0:0:0:35:0%:67:1E0:52:35:16:19:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:27:0%:52:1E0:53:27:10:17:27 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:53 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:42 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:48:0%:89:1E0:47:48:23:25:48 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:26:0%:47:1E0:50:26:11:15:27 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:27 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:16 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:18:0%:32:1E0:42:18:14:4:18 0/0:0:0:0:0:19:0%:37:1E0:46:19:13:6:19 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 0/0:0:0:0:0:32:0%:59:1E0:50:32:17:15:33 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:40:0%:74:1E0:48:40:14:26:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:55:0%:99:1E0:49:55:28:27:57 0/0:0:0:0:0:40:0%:74:1E0:45:40:26:14:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:17 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:21 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:16:8:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:30:0%:55:1E0:48:30:10:20:30 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:18 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:32 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:39 1/1:46:16:8:8:17:94.12%:81:7.7134E-9:37:1:0:1:17 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:47:0%:89:1E0:45:47:30:17:47 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:20 0/0:0:0:0:0:14:0%:25:1E0:45:14:7:7:14 0/0:0:0:0:0:58:0%:99:1E0:46:58:31:27:58 0/0:60:1:0:1:24:4.17%:34:5E-1:44:23:11:12:24 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:38:1:1:0:16:6.25%:21:5E-1:50:15:4:11:16 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:31 0/0:0:0:0:0:37:0%:70:1E0:50:37:21:16:37 0/0:0:0:0:0:22:0%:40:1E0:49:22:8:14:22 0/0:0:0:0:0:36:0%:66:1E0:51:36:21:15:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:24:10:34 0/0:0:0:0:0:28:0%:51:1E0:48:28:20:8:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:34 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:23:10:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:43 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:23 0/0:0:0:0:0:56:0%:99:1E0:47:56:32:24:56 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:18:7:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:44 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:46:0%:85:1E0:47:46:19:27:46 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:38:1:0:1:41:2.44%:66:5E-1:50:40:19:21:42 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:32:2:2:0:27:7.41%:34:2.4528E-1:45:25:12:13:27 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:22:10:33 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:36 0/0:0:0:0:0:59:0%:99:1E0:43:59:30:29:59 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:55:0%:99:1E0:44:55:27:28:56 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:52 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:19 0/0:0:0:0:0:66:0%:99:1E0:42:66:30:36:68 0/0:0:0:0:0:40:0%:74:1E0:38:40:24:16:40 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:44 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:38 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:40 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:26 0/0:0:0:0:0:45:0%:85:1E0:45:45:18:27:47 0/0:0:0:0:0:41:0%:78:1E0:39:41:25:16:41 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:46 0/0:0:0:0:0:40:0%:74:1E0:37:40:20:20:40 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:38:1:1:0:50:2%:80:5E-1:37:49:26:23:52 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:47 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:40:0%:74:1E0:46:40:13:27:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:42 0/0:0:0:0:0:16:0%:29:1E0:42:16:5:11:16 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:24:1:1:0:46:2.17%:73:5E-1:43:45:25:20:48 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 MTB_anc 505974 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|lpqM_Rv0419|gene431|transcript|Transcript_gene431|Coding|1/1|c.889A>G|p.Thr297Ala|889/1497|889/1497|297/498||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.505974A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.505974A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:38:18:20:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:52:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:50:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:53:23:30:54:98.15%:99:2.2126E-30:60:1:0:1:54 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:45:47:19:28:48:97.92%:99:6.1512E-28:0:0:0:0:48 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:12:19:32:96.88%:99:1.8007E-17:36:1:0:1:32 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:24:8:16:25:96%:99:3.101E-14:0:0:0:0:27 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:61:28:33:61:100%:99:2.609E-36:0:0:0:0:64 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:53:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:54:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:48:20:28:48:100%:99:1.554E-28:0:0:0:0:51 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:39:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 507773 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|thiD_Rv0422c|gene434|transcript|Transcript_gene434|Coding|1/1|c.783G>C|p.Leu261Leu|783/798|783/798|261/265||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.507773C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.507773C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:28:11:17:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:36:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:35:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:34:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:34:13:21:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:37:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:35:19:16:36:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 508384 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|thiD_Rv0422c|gene434|transcript|Transcript_gene434|Coding|1/1|c.172G>T|p.Asp58Tyr|172/798|172/798|58/265||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.508384C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.508384C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:57:37:20:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:34:18:16:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:38:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:39:24:15:40:97.5%:99:3.8137E-22:39:1:1:0:40 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:32:27:5:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:26:18:8:27:96.3%:99:1.4382E-14:38:1:0:1:28 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:29:25:4:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:48:34:14:48:100%:99:1.554E-28:0:0:0:0:49 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:45:35:10:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:37:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:37:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:47:33:14:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:58:38:20:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:37:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 514657 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|ctpH_Rv0425c|gene437|transcript|Transcript_gene437|Coding|1/1|c.665C>A|p.Ala222Glu|665/4620|665/4620|222/1539||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.514657G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.514657G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:52:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:52:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:24:10:14:25:96%:99:3.101E-14:0:0:0:0:25 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:48:34:14:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:39:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:48 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:62 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 MTB_anc 517358 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0428c_Rv0428c|gene440|transcript|Transcript_gene440|Coding|1/1|c.446G>A|p.Gly149Asp|446/909|446/909|149/302||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.517358C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.517358C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:60:26:34:60:100%:99:1.035E-35:0:0:0:0:61 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:45:22:23:46:97.83%:99:1.1441E-25:38:1:0:1:46 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:68:30:38:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:52:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:49:28:21:49:100%:99:3.925E-29:0:0:0:0:52 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:66:36:30:66:100%:99:2.6498E-39:0:0:0:0:69 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 MTB_anc 517411 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0428c_Rv0428c|gene440|transcript|Transcript_gene440|Coding|1/1|c.393C>T|p.Arg131Arg|393/909|393/909|131/302||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.517411G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.517411G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:60:28:32:60:100%:99:1.035E-35:0:0:0:0:62 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:53:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:63:27:36:63:100%:99:1.657E-37:0:0:0:0:64 1/1:45:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:50:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:63:41:22:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:54:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:32:20:12:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:68:39:29:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:57:37:20:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 519185 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0431_Rv0431|gene443|transcript|Transcript_gene443|Coding|1/1|c.113G>T|p.Gly38Val|113/495|113/495|38/164||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.519185G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.519185G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:16:33:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:34:7:27:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:50:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:63:32:31:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:61:25:36:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:39:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 520757 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv0433_Rv0433|gene445|transcript|Transcript_gene445|Coding|1/1|c.434G>A|p.Arg145His|434/1131|434/1131|145/376||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.520757G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.520757G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:44:52:28:24:52 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:33:1:0:1:63:1.59%:99:5E-1:44:62:33:29:63 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:42:0%:77:1E0:51:42:17:25:42 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:40:0%:74:1E0:50:40:25:15:40 0/0:60:1:1:0:32:3.12%:48:5E-1:51:31:10:21:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:38 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:47 0/0:0:0:0:0:28:0%:51:1E0:52:28:14:14:29 0/0:0:0:0:0:53:0%:99:1E0:44:53:23:30:53 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:60:1:1:0:24:4.17%:34:5E-1:43:23:13:10:25 0/0:0:0:0:0:18:0%:32:1E0:44:18:13:5:18 0/0:0:0:0:0:23:0%:44:1E0:40:23:16:7:23 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:36 0/0:60:1:0:1:60:1.67%:98:5E-1:43:59:26:33:61 0/0:0:0:0:0:37:0%:70:1E0:48:37:23:14:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:36 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:35:0%:67:1E0:47:35:20:15:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:33 1/1:51:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:36 0/0:0:0:0:0:37:0%:70:1E0:49:37:24:13:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:38:1:1:0:33:3.03%:52:5E-1:44:32:13:19:33 0/0:0:0:0:0:67:0%:99:1E0:46:67:31:36:67 0/0:39:1:1:0:50:2%:80:5E-1:45:49:26:23:51 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:41:0%:78:1E0:48:41:25:16:42 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:24 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:60:1:1:0:41:2.44%:66:5E-1:42:40:22:18:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:38 0/0:0:0:0:0:52:0%:96:1E0:45:52:25:27:52 0/0:0:0:0:0:14:0%:25:1E0:49:14:6:8:14 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:30 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:56:0%:99:1E0:41:56:25:31:56 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:24:11:35 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:36 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:51:32:16:16:32 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:48 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:30 0/0:0:0:0:0:41:0%:78:1E0:49:41:22:19:41 0/0:0:0:0:0:49:0%:93:1E0:46:49:27:22:49 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:38 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:49:0%:93:1E0:49:49:24:25:49 0/0:0:0:0:0:30:0%:55:1E0:50:30:13:17:30 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:37:0%:70:1E0:49:37:13:24:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:12:25:38 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:18 0/0:0:0:0:0:36:0%:66:1E0:50:36:15:21:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:39 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:36:1:1:0:23:4.35%:34:5E-1:48:22:7:15:23 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:34 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:49:36:20:16:36 0/0:0:0:0:0:56:0%:99:1E0:42:56:30:26:57 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:49 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:16:26:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:46 0/0:0:0:0:0:16:0%:29:1E0:50:16:11:5:16 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:40:0%:74:1E0:49:40:20:20:40 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:43 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:18:8:29 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:36 0/0:0:0:0:0:45:0%:85:1E0:40:45:18:27:47 0/0:0:0:0:0:58:0%:99:1E0:41:58:28:30:58 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:50 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:74:0%:99:1E0:42:74:39:35:74 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:50 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:50:0%:92:1E0:39:50:29:21:50 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:26:14:40 0/0:0:0:0:0:39:0%:74:1E0:39:39:14:25:41 0/0:0:0:0:0:54:0%:99:1E0:45:54:23:31:54 0/0:0:0:0:0:53:0%:99:1E0:40:53:23:30:55 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:11:22:34 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:46 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:47 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:42 0/0:0:0:0:0:57:0%:99:1E0:39:57:26:31:57 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:57:0%:99:1E0:43:57:17:40:58 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:47 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:20:9:29 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:35 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:21 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:45 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:10:32:42 MTB_anc 522081 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0434_Rv0434|gene446|transcript|Transcript_gene446|Coding|1/1|c.568G>A|p.Ala190Thr|568/654|568/654|190/217||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.522081G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.522081G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:17:8:9:18:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:53:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:46:11:35:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:54:28:26:55:98.18%:99:4.0229E-32:0:0:0:0:55 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:38:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 525833 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|psd_Rv0437c|gene449|transcript|Transcript_gene449|Coding|1/1|c.250G>A|p.Val84Met|250/696|250/696|84/231||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.525833C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.525833C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:21:10:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:24:12:12:25:96%:99:2.0568E-13:38:1:0:1:25 1/1:45:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:34:24:10:35:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:41:21:20:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:60:34:26:60:100%:99:1.035E-35:0:0:0:0:62 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:25:13:12:26:96.15%:99:5.4444E-14:38:1:1:0:28 1/1:41:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:46 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 527316 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|moeA2_Rv0438c|gene450|transcript|Transcript_gene450|Coding|1/1|c.45C>G|p.Ile15Met|45/1218|45/1218|15/405||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.527316G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.527316G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:50:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:39:20:19:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:37:16:21:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:29:13:16:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:68:36:32:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:41:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 528354 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|Rv0439c_Rv0439c-groEL2_Rv0440|gene451-gene452|intergenic_region|gene451-gene452|||n.528354A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:51:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:62:36:26:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:32:17:15:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:37:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:39:23:16:40:97.5%:99:3.6742E-23:0:0:0:0:44 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:61:22:39:61:100%:99:2.609E-36:0:0:0:0:61 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 534427 . A T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|sigK_Rv0445c-Rv0446c_Rv0446c|gene457-gene458|intergenic_region|gene457-gene458|||n.534427A>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:48:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:24:17:7:24:100%:99:3.101E-14:0:0:0:0:27 1/1:50:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:54 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:27 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:34:18:16:35:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:52:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:30:14:16:31:96.77%:99:8.4556E-18:0:0:0:0:33 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:64:27:37:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:37:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:51 1/1:40:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:50 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:66:31:35:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 544461 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE11_Rv0453|gene465|transcript|Transcript_gene465|Coding|1/1|c.1288C>T|p.Arg430Cys|1288/1557|1288/1557|430/518||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.544461C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.544461C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:60:28:32:60:100%:99:1.035E-35:0:0:0:0:60 1/1:49:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:59:21:38:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:60:25:35:60:100%:99:1.035E-35:0:0:0:0:62 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:33:14:19:34:97.06%:99:1.2301E-18:34:1:1:0:34 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:19:15:35:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:63:29:34:63:100%:99:1.657E-37:0:0:0:0:66 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:49:25:24:50:98%:99:5.0549E-28:37:1:0:1:51 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:43:17:26:44:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:41:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:38 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:37:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:36:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:37:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:39:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:35:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:41:16:25:42:97.62%:99:2.5612E-23:35:1:1:0:44 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 MTB_anc 546357 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|echA2_Rv0456c|gene467|transcript|Transcript_gene467|Coding|1/1|c.447C>T|p.Thr149Thr|447/915|447/915|149/304||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.546357G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.546357G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:48:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:56 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:29:11:18:30:96.67%:99:2.6212E-16:60:1:1:0:31 1/1:45:21:9:12:22:95.45%:99:1.0931E-11:38:1:0:1:23 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:51:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:60:31:29:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:41:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:60:27:33:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:65:41:24:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:42:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:36:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:48:30:18:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:39 MTB_anc 546914 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|echA2_Rv0456c-mazF1_Rv0456A|gene467-gene468|intergenic_region|gene467-gene468|||n.546914G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:61:36:25:61:100%:99:2.609E-36:0:0:0:0:61 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:55:37:18:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:31:15:16:32:96.88%:99:1.8007E-17:37:1:1:0:33 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:65:34:31:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:59:39:20:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:51 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:47:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:21:21:43:97.67%:99:6.6289E-24:37:1:0:1:44 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 547914 . T C . PASS AC=50;AF=0.167;AN=300;ANN=C|missense_variant|MODERATE|Rv0457c_Rv0457c|gene470|transcript|Transcript_gene470|Coding|1/1|c.1694A>G|p.His565Arg|1694/2022|1694/2022|565/673||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.547914T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.547914T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:41 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:19 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:45 0/0:0:0:0:0:33:0%:63:1E0:41:33:10:23:33 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 1/1:46:28:11:17:29:96.55%:99:9.9776E-16:37:1:0:1:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:20:0%:36:1E0:43:20:5:15:20 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:49 0/0:0:0:0:0:35:0%:67:1E0:42:35:8:27:35 0/0:0:0:0:0:25:0%:48:1E0:39:25:2:23:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:38:33:9:24:34 0/0:0:0:0:0:59:0%:99:1E0:42:59:25:34:61 0/0:0:0:0:0:31:0%:59:1E0:40:31:8:23:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:7:23:31 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 1/1:42:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:18 1/1:41:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:37 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:35 0/0:0:0:0:0:42:0%:77:1E0:41:42:13:29:43 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:14:26:40 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:59:0%:99:1E0:42:59:22:37:59 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:40 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:31 1/1:38:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:41:0%:78:1E0:40:41:15:26:41 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:32 0/0:0:0:0:0:52:0%:96:1E0:40:52:16:36:52 0/0:0:0:0:0:44:0%:81:1E0:40:44:16:28:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:38 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:32 0/0:0:0:0:0:19:0%:37:1E0:42:19:5:14:19 0/0:0:0:0:0:27:0%:52:1E0:40:27:8:19:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:46 0/0:0:0:0:0:33:0%:63:1E0:40:33:9:24:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:9:25:34 0/0:0:0:0:0:43:0%:82:1E0:41:43:10:33:45 0/0:0:0:0:0:38:0%:70:1E0:41:38:9:29:38 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:40 0/0:0:0:0:0:54:0%:99:1E0:40:54:22:32:55 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:35 0/0:0:0:0:0:51:0%:97:1E0:43:51:19:32:51 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:9:21:31 0/0:0:0:0:0:16:0%:29:1E0:42:16:5:11:17 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:22:0%:40:1E0:44:22:6:16:23 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:16 1/1:44:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:39:34:10:24:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:31 1/1:41:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:40 0/0:0:0:0:0:25:0%:48:1E0:40:25:6:19:25 1/1:39:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:34:0%:62:1E0:39:34:10:24:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:26 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:43:0%:82:1E0:38:43:19:24:44 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:37 0/0:0:0:0:0:48:0%:89:1E0:39:48:21:27:49 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:38:32:6:26:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:7:21:28 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:38:0%:70:1E0:39:38:13:25:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:7:27:35 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:10:24:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:42 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:36 0/0:0:0:0:0:20:0%:36:1E0:40:20:6:14:21 0/0:0:0:0:0:32:0%:59:1E0:38:32:8:24:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:34 0/0:0:0:0:0:30:0%:55:1E0:36:30:13:17:31 0/0:0:0:0:0:35:0%:67:1E0:37:35:13:22:36 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:0:0:0:0:55:0%:99:1E0:39:55:18:37:56 1/1:39:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:8:20:29 1/1:37:50:20:30:51:98.04%:99:1.3013E-28:60:1:0:1:51 0/0:0:0:0:0:40:0%:74:1E0:38:40:12:28:42 0/0:0:0:0:0:38:0%:70:1E0:38:38:16:22:40 0/0:0:0:0:0:34:0%:62:1E0:38:34:12:22:36 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:50 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:31 0/0:0:0:0:0:31:0%:59:1E0:36:31:9:22:33 0/0:0:0:0:0:36:0%:66:1E0:37:36:12:24:37 1/1:38:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:33:0%:63:1E0:38:33:7:26:34 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:29:0%:55:1E0:38:29:8:21:31 1/1:39:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:60:0%:99:1E0:38:60:17:43:60 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:35 1/1:38:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:8:22:32 0/0:0:0:0:0:40:0%:74:1E0:40:40:13:27:41 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:15 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:37 0/0:0:0:0:0:37:0%:70:1E0:39:37:11:26:38 0/0:0:0:0:0:42:0%:77:1E0:39:42:13:29:43 MTB_anc 552495 . G GCTA . PASS AC=258;AF=0.860;AN=300;ANN=GCTA|disruptive_inframe_insertion|MODERATE|Rv0461_Rv0461|gene474|transcript|Transcript_gene474|Coding|1/1|c.479_481dupACT|p.Tyr160dup|482/525|482/525|161/174||INFO_REALIGN_3_PRIME,GCTA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.552495_552496insCTA||||||,GCTA|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.552495_552496insCTA||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:34:16:18:36:94.44%:99:1.5887E-18:45:2:1:1:36 0/1:46:16:9:7:18:88.89%:76:2.0936E-8:48:2:1:1:18 1/1:46:43:20:23:45:93.48%:99:4.485E-23:45:3:1:2:46 0/1:53:22:14:8:26:84.62%:99:5.5261E-11:48:4:3:1:26 1/1:45:27:16:11:29:93.1%:99:1.5465E-14:60:2:1:1:29 1/1:48:19:9:10:21:90.48%:93:4.7003E-10:31:2:1:1:22 1/1:50:38:15:23:41:92.68%:99:3.1178E-20:37:3:1:2:41 0/1:43:24:9:15:28:85.71%:99:4.7015E-12:54:4:1:3:28 1/1:52:34:17:17:36:94.44%:99:1.5887E-18:41:2:1:1:37 1/1:47:26:11:15:27:96.3%:99:2.0165E-15:0:0:0:0:27 0/1:49:22:11:11:25:88%:99:2.5916E-11:52:3:0:3:25 1/1:44:45:17:28:47:95.74%:99:7.2338E-25:35:2:0:2:47 1/1:52:24:10:14:26:92.31%:99:7.6222E-13:49:2:0:2:26 1/1:50:42:21:21:44:93.33%:99:1.6658E-22:37:3:1:2:45 1/1:46:28:20:8:30:93.33%:99:4.194E-15:33:2:1:1:30 0/1:48:25:9:16:28:89.29%:99:5.8768E-13:37:3:1:2:28 1/1:43:26:14:12:27:92.86%:99:1.4382E-14:33:1:0:1:28 1/1:50:23:10:13:25:92%:99:2.7767E-12:36:2:1:1:25 0/1:48:20:11:9:23:86.96%:95:3.1579E-10:31:3:1:2:23 1/1:47:21:6:15:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:44:37:16:21:38:92.5%:99:1.1479E-19:37:3:1:2:40 1/1:45:54:31:23:60:90%:99:3.1304E-28:36:5:1:4:60 0/1:46:27:11:16:30:87.1%:99:1.125E-13:45:4:1:3:31 1/1:48:48:26:22:50:96%:99:1.3143E-26:49:2:1:1:50 1/1:44:41:17:24:43:95.35%:99:1.4915E-22:48:2:0:2:43 0/1:47:25:17:8:28:89.29%:99:5.8768E-13:34:3:2:1:28 1/1:46:19:9:10:20:95%:98:1.5234E-10:33:1:1:0:21 0/1:55:16:7:9:18:88.89%:76:2.0936E-8:31:2:1:1:18 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:10:15:26:92.59%:99:2.0853E-13:37:2:0:2:27 1/1:41:23:7:16:25:92%:99:2.7767E-12:35:2:0:2:25 0/1:44:22:7:15:25:88%:99:2.5916E-11:36:3:1:2:25 1/1:48:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:14:29:43:97.73%:99:1.7144E-24:60:1:1:0:44 0/1:48:33:14:19:41:80.49%:99:1.0617E-15:45:8:3:5:41 1/1:45:28:12:16:30:93.33%:99:4.194E-15:35:2:0:2:30 1/1:45:35:19:16:36:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:48:51:21:30:53:96.23%:99:2.3675E-28:35:2:0:2:53 0/1:44:42:23:19:47:89.36%:99:1.5987E-21:36:5:2:3:47 1/1:45:36:19:17:38:94.74%:99:1.1316E-19:49:2:0:2:39 1/1:42:32:13:19:34:94.12%:99:4.7095E-18:37:1:1:0:34 1/1:45:37:16:21:39:94.87%:99:3.0128E-20:37:2:1:1:39 1/1:49:22:10:12:23:91.67%:99:1.0078E-11:56:2:1:1:25 0/1:44:22:9:13:25:88%:99:2.5916E-11:45:3:2:1:25 1/1:45:32:13:19:35:91.43%:99:7.5196E-17:34:3:1:2:35 0/1:44:25:9:16:31:80.65%:99:4.9949E-12:41:6:2:4:31 1/1:45:33:12:21:36:91.67%:99:2.0653E-17:36:3:1:2:37 1/1:41:32:13:19:34:94.12%:99:2.2142E-17:36:2:2:0:34 1/1:42:39:19:20:41:95.12%:99:2.1258E-21:49:2:1:1:41 1/1:50:46:17:29:51:90.2%:99:3.1346E-24:44:4:2:2:51 1/1:50:21:8:13:22:95.45%:99:1.0931E-11:38:1:0:1:22 0/1:48:27:13:14:33:81.82%:99:4.5192E-13:41:6:2:4:33 1/1:47:21:14:7:22:91.3%:99:3.6437E-11:33:2:1:1:23 0/1:46:26:16:10:28:89.66%:99:1.6496E-13:32:3:1:2:29 0/1:45:28:8:20:33:87.5%:99:3.2142E-14:41:4:3:1:33 0/1:44:40:19:21:44:86.96%:99:4.9559E-20:44:6:2:4:46 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 0/1:46:33:14:19:38:86.84%:99:1.3966E-16:37:5:1:4:38 1/1:45:34:18:16:34:97.14%:99:3.5146E-20:0:0:0:0:34 0/1:47:27:12:15:33:81.82%:99:4.5192E-13:48:6:3:3:33 1/1:46:34:19:15:33:97.14%:99:3.2089E-19:38:1:0:1:36 1/1:47:43:20:23:46:93.48%:99:4.485E-23:36:3:2:1:46 1/1:47:29:16:13:31:90.62%:99:3.5714E-15:33:3:1:2:32 0/1:45:31:15:16:35:88.57%:99:7.3316E-16:37:4:3:1:35 1/1:46:59:32:27:61:95.16%:99:2.8722E-32:36:3:1:2:62 0/1:47:20:11:9:23:86.96%:95:3.1579E-10:37:3:0:3:23 1/1:48:39:19:20:43:90.7%:99:2.6872E-20:48:4:1:3:43 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 0/1:48:15:8:7:17:88.24%:75:2.8282E-8:38:1:0:1:17 1/1:46:24:10:14:25:96%:99:2.0568E-13:37:1:0:1:27 0/1:51:33:13:20:37:89.19%:99:2.0653E-17:44:3:3:0:37 0/1:43:16:6:10:18:84.21%:73:4.357E-8:60:3:2:1:19 1/1:47:33:19:14:35:94.29%:99:5.9366E-18:46:2:2:0:35 1/1:44:49:24:25:49:98%:99:5.0549E-28:37:1:1:0:50 1/1:46:32:17:15:33:96.97%:99:4.7095E-18:37:1:0:1:33 0/1:43:22:12:10:26:84.62%:99:5.5261E-11:42:4:1:3:26 1/1:45:34:15:19:37:91.89%:99:5.6582E-18:37:3:3:0:37 1/1:45:40:17:23:42:95.24%:99:5.6346E-22:48:2:2:0:42 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:27:15:12:29:93.1%:99:1.5465E-14:47:2:1:1:29 0/1:45:41:21:20:46:89.13%:99:5.7183E-21:37:5:3:2:46 1/1:47:24:8:16:26:92.31%:99:7.6222E-13:36:2:2:0:27 1/1:46:28:12:16:28:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:48:27:13:14:28:93.1%:99:1.5465E-14:38:2:1:1:29 0/1:44:28:13:15:32:87.5%:99:3.2142E-14:34:4:2:2:33 1/1:45:28:13:15:29:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:48:24:13:11:25:92.31%:99:7.6222E-13:37:2:1:1:26 0/1:50:25:10:15:29:86.21%:99:1.3609E-12:36:4:1:3:29 1/1:47:27:13:14:29:93.1%:99:1.5465E-14:48:2:0:2:29 1/1:46:25:8:17:26:96.15%:99:5.4444E-14:37:1:0:1:26 1/1:46:21:12:9:23:91.3%:99:3.6437E-11:48:2:1:1:23 1/1:41:46:22:24:48:92%:99:3.1346E-24:36:4:2:2:50 1/1:43:32:12:20:33:94.12%:99:2.2142E-17:37:2:1:1:34 1/1:42:36:19:17:38:94.74%:99:1.1316E-19:36:2:1:1:38 1/1:48:27:13:14:29:93.1%:99:1.5465E-14:38:2:0:2:29 0/1:43:32:14:18:36:88.89%:99:2.0653E-16:36:4:2:2:36 1/1:44:35:18:17:35:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:40:33:21:12:32:97.06%:99:1.2301E-18:37:1:0:1:34 1/1:46:43:22:21:44:97.73%:99:1.7144E-24:37:1:0:1:44 1/1:47:28:10:18:30:90.32%:99:4.194E-15:49:2:0:2:30 0/1:44:29:18:11:33:85.29%:99:2.0235E-14:36:5:2:3:35 1/1:42:39:24:15:39:92.86%:99:8.4519E-21:29:3:0:3:44 1/1:45:26:12:14:28:92.86%:99:5.6872E-14:37:2:1:1:28 1/1:43:19:8:11:21:90.48%:93:4.7003E-10:34:2:0:2:21 1/1:46:24:10:14:25:96%:99:2.0568E-13:60:1:1:0:26 0/1:46:21:12:9:23:87.5%:99:9.0704E-11:34:3:3:0:24 0/1:45:38:19:19:43:88.37%:99:2.5797E-19:40:5:3:2:44 1/1:45:28:6:22:29:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:42:34:15:19:36:94.44%:99:1.5887E-18:37:2:0:2:36 1/1:44:27:16:11:29:90%:99:4.6134E-14:37:3:2:1:30 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:20:22:42:97.67%:99:6.6289E-24:37:1:1:0:43 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:48:23:25:47:97.96%:99:1.9625E-27:37:1:0:1:50 1/1:38:28:17:11:27:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:41:26:11:15:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:15:14:30:93.55%:99:1.1344E-15:37:2:1:1:31 1/1:42:50:32:18:53:90.91%:99:5.5432E-26:42:5:3:2:55 1/1:42:51:17:34:53:96.23%:99:2.3675E-28:37:2:2:0:53 1/1:43:25:17:8:26:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:43:24:11:13:25:92.31%:99:7.6222E-13:35:2:0:2:26 1/1:39:45:21:24:47:91.84%:99:1.1493E-23:35:4:2:2:49 0/1:40:35:9:26:40:87.5%:99:1.1364E-17:34:5:5:0:40 1/1:45:42:22:20:45:93.33%:99:1.6658E-22:34:3:1:2:45 0/1:39:42:19:23:46:85.71%:99:9.1028E-21:36:7:4:3:49 1/1:43:46:21:25:49:93.88%:99:8.6743E-25:35:3:2:1:49 1/1:41:38:25:13:41:90.48%:99:9.7197E-20:34:4:0:4:43 1/1:44:39:18:21:41:90.7%:99:2.6872E-20:36:4:2:2:43 0/1:40:41:18:23:45:89.13%:99:5.7183E-21:35:5:3:2:46 0/1:40:33:19:14:36:89.19%:99:5.7997E-17:36:4:0:4:37 1/1:41:32:17:15:32:91.43%:99:7.5196E-17:35:3:0:3:35 0/1:40:34:17:17:38:87.18%:99:3.9902E-17:35:5:3:2:39 1/1:39:30:15:15:31:93.75%:99:3.0612E-16:37:2:0:2:32 1/1:46:32:17:15:34:94.12%:99:5.4567E-19:0:0:0:0:34 1/1:39:49:24:25:48:98%:99:5.0549E-28:60:1:1:0:50 1/1:42:36:21:15:36:97.3%:99:2.1762E-20:38:1:0:1:38 0/1:41:50:30:20:57:87.72%:99:4.0113E-25:40:7:3:4:57 0/1:40:39:23:16:45:84.78%:99:1.7346E-19:39:6:3:3:46 1/1:44:39:24:15:41:90.7%:99:2.6872E-20:37:4:2:2:43 1/1:45:17:11:6:18:94.44%:86:2.0936E-9:38:1:1:0:18 1/1:43:37:22:15:39:94.87%:99:3.0128E-20:34:2:0:2:39 1/1:44:41:19:22:45:91.11%:99:2.0407E-21:37:4:0:4:45 1/1:44:27:16:11:28:93.1%:99:1.5465E-14:37:2:0:2:29 0/1:42:17:4:13:19:89.47%:82:5.9414E-9:37:2:0:2:19 1/1:43:28:9:19:31:90.32%:99:1.2857E-14:36:3:3:0:31 1/1:40:38:24:14:41:90.48%:99:9.7197E-20:33:4:2:2:43 1/1:43:47:20:27:48:97.92%:99:7.6145E-27:33:1:1:0:48 0/1:46:30:14:16:36:83.33%:99:1.1855E-14:36:6:4:2:37 MTB_anc 555991 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0465c_Rv0465c|gene478|transcript|Transcript_gene478|Coding|1/1|c.316C>T|p.Arg106Cys|316/1425|316/1425|106/474||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.555991G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.555991G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:24:8:16:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:47:12:35:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:47:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:22:8:14:23:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:47:19:28:48:97.92%:99:7.6145E-27:38:1:0:1:51 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:39:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:41:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:64:29:35:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 558829 . C G . PASS AC=14;AF=0.047;AN=300;ANN=G|intergenic_region|MODIFIER|icl1_Rv0467-fadB2_Rv0468|gene480-gene481|intergenic_region|gene480-gene481|||n.558829C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:39 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:47:0%:89:1E0:45:47:30:17:48 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:9:21:30 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:20:0%:36:1E0:47:20:15:5:20 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:51:0%:97:1E0:47:51:25:26:51 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:47:0%:89:1E0:45:47:26:21:47 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:27:12:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:35:1:0:1:37:2.7%:59:5E-1:45:36:21:15:38 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:20 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:39:0%:74:1E0:49:39:16:23:39 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:36:0%:66:1E0:39:36:12:24:36 0/0:60:1:1:0:54:1.85%:87:5E-1:46:53:27:26:54 0/0:0:0:0:0:45:0%:85:1E0:47:45:24:21:45 0/0:0:0:0:0:49:0%:93:1E0:45:49:30:19:49 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:46 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:49 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:53 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:42 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:22 0/0:0:0:0:0:49:0%:93:1E0:41:49:26:23:50 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:53:0%:99:1E0:42:53:26:27:53 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:50:0%:92:1E0:44:50:22:28:50 0/0:60:1:0:1:42:2.38%:66:5E-1:46:41:18:23:42 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:39 0/0:0:0:0:0:53:0%:99:1E0:40:53:28:25:53 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:41 0/0:0:0:0:0:53:0%:99:1E0:46:53:22:31:54 0/0:60:1:1:0:32:3.12%:48:5E-1:42:31:19:12:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:17:0%:33:1E0:46:17:11:6:17 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:60:1:0:1:26:3.85%:38:5E-1:50:25:17:8:26 0/0:0:0:0:0:20:0%:36:1E0:51:20:7:13:20 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:39:0%:70:1E0:44:38:12:26:40 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:35 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:25 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:44 0/0:0:0:0:0:31:0%:59:1E0:47:31:20:11:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:19:0%:37:1E0:50:19:12:7:19 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:48 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:22 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:46 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:38 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:43:26:7:19:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:19:0%:32:1E0:38:18:8:10:20 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:51:0%:97:1E0:41:51:24:27:52 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:38 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:59:0%:99:1E0:42:59:32:27:61 0/0:0:0:0:0:45:0%:85:1E0:41:45:27:18:47 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:48 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:23 0/0:0:0:0:0:56:0%:99:1E0:41:56:30:26:58 0/0:0:0:0:0:36:0%:66:1E0:38:36:24:12:37 0/0:0:0:0:0:52:0%:96:1E0:40:52:32:20:53 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:39 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:52:0%:96:1E0:40:52:27:25:52 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:25:12:37 0/0:0:0:0:0:44:0%:81:1E0:38:44:27:17:46 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:44 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:32 0/0:0:0:0:0:20:0%:36:1E0:44:20:5:15:20 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:43 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:41 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:30:19:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:29 MTB_anc 559986 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|umaA_Rv0469|gene482|transcript|Transcript_gene482|Coding|1/1|c.99C>T|p.Thr33Thr|99/861|99/861|33/286||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.559986C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.559986C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:40 0/0:0:0:0:0:19:0%:37:1E0:46:19:14:5:19 0/0:0:0:0:0:50:0%:92:1E0:47:50:26:24:50 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:45:0%:85:1E0:49:45:20:25:45 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:40:0%:74:1E0:50:40:22:18:40 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:28 0/0:0:0:0:0:43:0%:82:1E0:49:43:24:19:43 0/0:0:0:0:0:39:0%:74:1E0:47:39:19:20:39 0/0:0:0:0:0:50:0%:92:1E0:45:50:30:20:50 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:26:0%:47:1E0:51:26:14:12:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:50 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:19:11:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:16:0%:29:1E0:46:16:9:7:16 0/0:0:0:0:0:20:0%:36:1E0:48:20:14:6:20 0/0:0:0:0:0:27:0%:52:1E0:48:27:19:8:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:54:0%:99:1E0:46:54:28:26:54 0/0:0:0:0:0:36:0%:66:1E0:47:36:13:23:36 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:16:0%:29:1E0:51:16:7:9:16 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:20 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:21 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:45:0%:85:1E0:50:45:25:20:45 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:24 0/0:0:0:0:0:44:0%:81:1E0:47:44:21:23:45 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:80:0%:99:1E0:49:80:39:41:80 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:47 0/0:0:0:0:0:55:0%:99:1E0:46:55:27:28:56 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:60:1:0:1:41:2.44%:66:5E-1:43:40:16:24:42 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:22 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:23 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:44 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:37 0/0:0:0:0:0:49:0%:93:1E0:48:49:21:28:49 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:52:0%:96:1E0:43:52:29:23:54 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:48 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:39 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:51:0%:97:1E0:47:51:25:26:52 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:14:0%:25:1E0:46:14:6:8:14 0/0:0:0:0:0:55:0%:99:1E0:44:55:23:32:56 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:38:0%:70:1E0:49:38:16:22:38 0/0:0:0:0:0:18:0%:32:1E0:52:18:6:12:18 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:48:37:21:16:37 0/0:0:0:0:0:34:0%:62:1E0:51:34:12:22:34 0/0:0:0:0:0:18:0%:32:1E0:50:18:10:8:18 0/0:0:0:0:0:41:0%:78:1E0:49:41:22:19:41 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:38:1:0:1:38:2.63%:58:5E-1:46:37:22:15:38 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:49:39:17:22:39 0/0:0:0:0:0:28:0%:51:1E0:49:28:11:17:28 0/0:0:0:0:0:42:0%:77:1E0:48:42:13:29:42 0/0:0:0:0:0:23:0%:44:1E0:49:23:9:14:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:55:0%:99:1E0:44:55:33:22:55 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:17 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:32 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:46 0/0:0:0:0:0:41:0%:78:1E0:43:41:13:28:42 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:27:0%:52:1E0:50:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:39 0/0:0:0:0:0:42:0%:77:1E0:47:42:24:18:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:27 0/0:0:0:0:0:28:0%:51:1E0:49:28:11:17:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:39 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:33:0%:63:1E0:47:33:25:8:33 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:55:0%:99:1E0:41:55:31:24:55 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:22 0/0:0:0:0:0:51:0%:97:1E0:43:51:29:22:53 0/0:0:0:0:0:59:0%:99:1E0:43:59:22:37:59 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:31 0/0:0:0:0:0:55:0%:99:1E0:43:55:32:23:58 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:43 0/0:0:0:0:0:49:0%:93:1E0:44:49:33:16:49 0/0:0:0:0:0:48:0%:89:1E0:42:48:29:19:49 0/0:0:0:0:0:59:0%:99:1E0:42:59:19:40:63 0/0:0:0:0:0:44:0%:81:1E0:45:44:27:17:45 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:41 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:45 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:41 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:41 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:43 0/0:0:0:0:0:67:0%:99:1E0:38:67:29:38:68 0/0:0:0:0:0:55:0%:99:1E0:46:55:24:31:56 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:44 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:51 0/0:0:0:0:0:55:0%:99:1E0:43:55:25:30:56 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:14:30:44 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:54 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 MTB_anc 565404 . T G . PASS AC=299;AF=0.997;AN=300;ANN=G|synonymous_variant|LOW|Rv0474_Rv0474|gene488|transcript|Transcript_gene488|Coding|1/1|c.384T>G|p.Arg128Arg|384/423|384/423|128/140||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.565404T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.565404T>G||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:17:11:6:18:94.44%:86:2.0936E-9:38:1:1:0:18 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:49:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:29:18:11:30:96.67%:99:2.6212E-16:38:1:1:0:30 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:37:30:7:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:52:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:47:27:15:12:28:96.43%:99:3.7915E-15:60:1:1:0:28 0/1:43:6:2:4:7:85.71%:26:2.331E-3:60:1:1:0:7 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:52:35:17:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:50:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:28:8:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:44:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:35:23:12:36:97.22%:99:8.3613E-20:28:1:0:1:36 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 MTB_anc 567913 . T C . PASS AC=124;AF=0.413;AN=300;ANN=C|intergenic_region|MODIFIER|deoC_Rv0478-Rv0479c_Rv0479c|gene492-gene493|intergenic_region|gene492-gene493|||n.567913T>C||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 0/0:0:0:0:0:66:0%:99:1E0:43:66:32:34:66 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:33 1/1:49:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:35 1/1:46:24:9:15:25:96%:99:2.0568E-13:32:1:0:1:25 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:40:0%:74:1E0:47:40:16:24:41 1/1:40:41:14:27:42:97.62%:99:2.5612E-23:60:1:0:1:42 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:60:23:37:60:100%:99:1.035E-35:0:0:0:0:60 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:34 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:38 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:13:26:40 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:8:19:28 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:17 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 1/1:43:37:13:24:38:97.37%:99:5.7269E-22:0:0:0:0:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:46:0%:85:1E0:49:46:16:30:46 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:42:24:18:44:95.45%:99:6.6289E-24:38:1:1:0:44 1/1:48:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:65 0/0:0:0:0:0:60:0%:99:1E0:45:60:26:34:60 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 1/1:42:54:26:28:55:98.18%:99:4.0229E-32:0:0:0:0:55 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:11:24:37 1/1:38:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:54:0%:99:1E0:41:54:24:30:57 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:14:14:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:28 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:43:0%:82:1E0:45:43:15:28:45 0/0:0:0:0:0:69:0%:99:1E0:43:69:28:41:69 0/0:0:0:0:0:39:0%:74:1E0:40:39:15:24:41 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:48 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:35:0%:67:1E0:51:35:15:20:35 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:51 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:30:17:13:31:96.77%:99:6.8754E-17:38:1:0:1:32 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:32:0%:59:1E0:38:32:10:22:33 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:47:0%:89:1E0:41:47:18:29:50 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:26 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:31 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:39 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:34 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:28:12:16:29:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:40:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:50 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:28 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:19 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:39 0/0:0:0:0:0:29:0%:55:1E0:38:29:9:20:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:36 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:28 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:48 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:39 0/0:0:0:0:0:49:0%:93:1E0:38:49:17:32:51 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:9:26:36 0/0:0:0:0:0:22:0%:40:1E0:35:22:8:14:24 0/0:0:0:0:0:51:0%:97:1E0:40:51:20:31:52 0/0:0:0:0:0:51:0%:97:1E0:38:51:22:29:53 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:41 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:38 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:47 0/0:0:0:0:0:37:0%:70:1E0:38:37:16:21:40 0/0:0:0:0:0:38:0%:70:1E0:37:38:18:20:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:39 0/0:0:0:0:0:31:0%:59:1E0:37:31:13:18:32 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:29 0/0:0:0:0:0:31:0%:59:1E0:36:31:16:15:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:44:0%:81:1E0:39:44:17:27:44 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:39 1/1:37:43:16:27:44:97.73%:99:1.5066E-25:0:0:0:0:45 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:44 0/0:0:0:0:0:42:0%:77:1E0:41:42:15:27:43 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:37 0/0:0:0:0:0:17:0%:33:1E0:40:17:11:6:18 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:46:0%:85:1E0:41:46:14:32:46 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 569820 . GGCCCGGCGACGAGCGCGCCGCACCGGCGCGCGCAGGAGCCGGGCAATCCAGCTTGC G . PASS AC=145;AF=0.487;AN=298;ANN=G|intergenic_region|MODIFIER|Rv0480c_Rv0480c-Rv0481c_Rv0481c|gene494-gene495|intergenic_region|gene494-gene495|||n.569821_569876delGCCCGGCGACGAGCGCGCCGCACCGGCGCGCGCAGGAGCCGGGCAATCCAGCTTGC||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:49:22:8:14:37:59.46%:85:2.5665E-9:38:15:9:6:39 0/0:47:4:3:1:10:40%:3:4.3344E-2:36:6:2:4:11 0/1:44:23:15:8:42:54.76%:87:1.7689E-9:41:19:8:11:43 0/1:47:9:5:4:22:39.13%:31:7.4174E-4:43:14:8:6:24 0/1:44:16:8:8:29:53.33%:60:9.7202E-7:37:14:9:5:31 0/1:38:11:3:8:22:50%:40:9.1981E-5:49:11:8:3:23 0/1:46:17:11:6:31:54.84%:64:3.5853E-7:43:14:10:4:31 0/1:52:17:9:8:23:73.91%:72:5.7694E-8:36:6:4:2:23 0/0:55:6:1:5:26:23.08%:13:1.1309E-2:41:20:13:7:28 0/1:53:15:10:5:20:75%:64:3.8543E-7:45:5:3:2:20 0/1:40:8:2:6:13:61.54%:30:8.238E-4:41:5:5:0:13 0/1:44:23:13:10:38:58.97%:89:1.093E-9:37:16:9:7:43 0/1:47:7:4:3:11:63.64%:27:1.935E-3:48:4:2:2:11 0/1:43:21:10:11:32:63.64%:83:3.9837E-9:36:12:7:5:35 0/1:40:16:7:9:24:61.54%:62:5.1256E-7:36:10:7:3:26 0/1:42:15:6:9:27:55.56%:56:2.0087E-6:45:12:6:6:29 0/1:41:6:5:1:14:42.86%:20:7.971E-3:44:8:5:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:50:8:5:3:12:66.67%:31:6.7304E-4:33:4:2:2:12 0/1:43:9:6:3:17:50%:32:5.1645E-4:35:9:2:7:18 0/1:55:11:4:7:19:57.89%:42:6.2811E-5:37:8:5:3:21 0/1:43:17:9:8:30:54.84%:64:3.5853E-7:43:14:8:6:32 0/1:49:15:12:3:20:75%:64:3.8543E-7:35:5:3:2:20 0/1:48:16:12:4:27:59.26%:62:6.1806E-7:42:11:5:6:28 0/1:41:25:13:12:34:73.53%:99:1.9819E-11:38:9:2:7:34 0/1:41:9:6:3:14:60%:34:3.4983E-4:48:6:2:4:15 1/1:43:11:5:6:12:91.67%:53:4.8074E-6:34:1:0:1:14 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:14 0/1:46:13:6:7:20:65%:51:6.4422E-6:36:7:5:2:23 0/1:46:24:18:6:31:75%:99:4.1964E-11:39:8:6:2:32 0/1:43:16:11:5:28:57.14%:61:7.3043E-7:36:12:9:3:29 0/1:43:10:5:5:17:58.82%:38:1.4831E-4:37:7:4:3:17 0/1:47:16:9:7:24:61.54%:62:5.1256E-7:37:10:7:3:26 0/1:42:10:7:3:17:58.82%:38:1.4831E-4:38:7:4:3:19 0/1:49:22:13:9:27:78.57%:97:1.7583E-10:37:6:1:5:28 0/1:43:23:13:10:38:60.53%:90:9.0682E-10:38:15:6:9:39 0/1:44:24:11:13:34:70.59%:99:8.7205E-11:37:10:6:4:34 0/1:47:19:13:6:37:51.35%:70:8.2514E-8:44:18:13:5:39 0/1:48:16:10:6:28:57.14%:61:7.3043E-7:40:12:7:5:28 0/1:39:24:14:10:41:58.54%:93:4.6506E-10:39:17:9:8:43 0/1:43:14:3:11:29:48.28%:51:7.6466E-6:36:15:8:7:29 0/1:47:14:6:8:24:58.33%:53:4.0663E-6:39:10:5:5:26 0/1:41:9:6:3:23:39.13%:31:7.4174E-4:38:14:6:8:23 0/1:46:15:5:10:24:62.5%:59:1.196E-6:34:9:5:4:25 0/1:42:28:13:15:40:68.29%:99:2.6088E-12:38:13:8:5:42 0/1:42:25:14:11:36:69.44%:99:3.936E-11:36:11:6:5:39 0/1:49:18:11:7:33:54.55%:68:1.5143E-7:39:15:11:4:33 0/1:39:11:6:5:23:47.83%:39:1.0135E-4:39:12:6:6:24 0/1:44:21:14:7:37:56.76%:80:8.5014E-9:36:16:5:11:39 0/1:47:20:10:10:27:68.97%:82:5.4216E-9:41:9:5:4:32 0/1:53:11:7:4:16:68.75%:44:3.3854E-5:44:5:3:2:17 0/1:48:16:11:5:31:50%:59:1.2304E-6:42:16:7:9:34 0/1:46:11:4:7:20:55%:41:7.2653E-5:41:9:6:3:21 0/1:43:22:13:9:30:73.33%:93:4.1351E-10:33:8:5:3:32 0/1:42:13:7:6:21:61.9%:50:7.9741E-6:38:8:3:5:21 0/1:44:32:14:18:48:66.67%:99:7.5916E-14:40:16:9:7:50 0/1:48:19:11:8:36:52.78%:71:7.3012E-8:37:17:14:3:37 0/1:45:16:10:6:21:72.73%:67:1.7905E-7:32:6:4:2:22 0/1:42:19:9:10:29:61.29%:74:3.2956E-8:41:12:9:3:32 0/1:52:15:9:6:26:57.69%:57:1.7241E-6:41:11:4:7:26 0/1:46:9:7:2:16:56.25%:33:4.0786E-4:40:7:3:4:17 0/1:39:23:13:10:34:65.71%:93:4.6576E-10:41:12:6:6:35 0/1:45:18:11:7:31:58.06%:69:1.1154E-7:38:13:9:4:31 0/1:49:8:2:6:12:66.67%:31:6.7304E-4:36:4:2:2:13 0/1:46:19:12:7:26:73.08%:80:8.6144E-9:39:7:4:3:27 0/1:48:16:8:8:36:44.44%:57:1.7753E-6:45:20:11:9:38 0/1:47:7:2:5:18:38.89%:24:3.8123E-3:37:11:6:5:20 0/1:48:24:12:12:34:70.59%:99:8.7205E-11:42:10:5:5:35 0/1:46:10:3:7:19:52.63%:37:1.9541E-4:41:9:6:3:20 0/0:41:5:3:2:14:35.71%:4:2.037E-2:50:9:7:2:14 0/1:47:17:8:9:29:58.62%:65:2.627E-7:40:12:6:6:29 0/1:46:20:12:8:27:74.07%:85:2.7631E-9:43:7:4:3:27 0/1:47:10:5:5:15:66.67%:40:9.995E-5:41:5:0:5:15 0/1:51:17:10:7:24:70.83%:70:8.1543E-8:46:7:5:2:24 0/1:39:19:11:8:36:52.78%:71:7.3012E-8:38:17:9:8:38 0/1:40:11:6:5:19:55%:41:7.2653E-5:47:9:6:3:20 0/1:39:19:8:11:39:48.72%:69:1.0268E-7:38:20:14:6:40 0/1:48:19:8:11:26:73.08%:80:8.6144E-9:46:7:1:6:26 0/1:43:17:9:8:29:56.67%:65:3.0928E-7:44:13:7:6:30 0/1:37:13:9:4:23:52%:48:1.4654E-5:35:12:9:3:26 0/1:42:12:7:5:22:52.17%:44:3.4748E-5:34:11:6:5:24 0/1:46:14:5:9:23:60.87%:54:3.4067E-6:36:9:2:7:23 0/1:43:12:8:4:21:57.14%:45:2.658E-5:38:9:8:1:25 0/1:48:19:10:9:28:67.86%:77:1.6265E-8:46:9:5:4:28 0/1:44:18:9:9:25:72%:75:2.6626E-8:37:7:4:3:26 0/1:42:16:8:8:24:66.67%:64:3.2617E-7:41:8:4:4:25 0/1:45:15:7:8:29:51.72%:55:2.6068E-6:38:14:9:5:30 0/1:48:6:3:3:11:54.55%:22:6.192E-3:37:5:2:3:11 0/1:52:15:10:5:26:57.69%:57:1.7241E-6:41:11:4:7:26 0/1:49:12:6:6:14:85.71%:55:2.9913E-6:38:2:1:1:14 0/1:42:16:11:5:28:57.14%:61:7.3043E-7:41:12:9:3:28 0/1:42:14:8:6:18:73.68%:59:1.2025E-6:42:5:2:3:19 0/1:42:33:16:17:51:64.71%:99:4.3121E-14:35:18:11:7:54 0/1:46:13:8:5:20:61.9%:50:7.9741E-6:39:8:5:3:21 0/1:48:17:11:6:23:70.83%:72:5.7694E-8:36:6:2:4:25 0/1:48:12:7:5:21:57.14%:45:2.658E-5:35:9:8:1:23 0/1:34:14:8:6:24:56%:53:4.7528E-6:41:11:8:3:25 0/1:43:17:10:7:23:73.91%:72:5.7694E-8:40:6:3:3:28 0/1:38:19:9:10:27:70.37%:79:1.2089E-8:36:8:2:6:28 0/1:47:17:13:4:22:77.27%:74:3.8368E-8:32:5:4:1:24 0/1:47:11:7:4:20:55%:41:7.2653E-5:42:9:2:7:20 0/1:44:14:9:5:29:48.28%:51:7.6466E-6:38:15:7:8:30 0/1:47:13:7:6:18:72.22%:54:3.7078E-6:33:5:1:4:18 0/1:35:7:4:3:18:38.89%:24:3.8123E-3:36:11:6:5:24 0/1:50:12:5:7:16:75%:50:8.0605E-6:43:4:3:1:17 0/1:46:27:12:15:36:75%:99:2.0026E-12:44:9:5:4:36 0/1:42:17:8:9:24:68%:69:1.0983E-7:41:8:4:4:25 0/1:43:20:9:11:29:68.97%:84:3.9563E-9:34:8:6:2:29 0/1:36:11:6:5:23:45.83%:39:1.1047E-4:37:13:6:7:25 0/1:43:14:7:7:20:66.67%:56:2.1998E-6:39:7:4:3:21 0/1:38:17:10:7:28:60.71%:66:2.1913E-7:38:11:7:4:31 0/1:50:14:6:8:20:70%:57:1.6702E-6:41:6:2:4:20 0/1:45:11:7:4:15:73.33%:46:2.4988E-5:43:4:1:3:16 0/1:44:18:8:10:29:62.07%:71:7.6888E-8:35:11:9:2:30 0/1:36:8:2:6:13:57.14%:30:9.6618E-4:38:6:3:3:15 0/1:36:17:6:11:26:62.96%:67:1.7891E-7:36:10:5:5:27 0/1:35:14:8:6:23:58.33%:53:4.0663E-6:35:10:5:5:25 0/1:41:16:12:4:31:48.48%:58:1.364E-6:41:17:12:5:34 0/1:40:12:8:4:19:63.16%:47:1.8611E-5:35:7:3:4:19 0/1:38:20:14:6:38:52.63%:75:3.0805E-8:37:18:9:9:42 0/1:39:14:5:9:27:50%:51:6.911E-6:37:14:6:8:28 0/1:40:8:3:5:14:57.14%:30:9.6618E-4:34:6:2:4:15 0/1:44:9:3:6:21:42.86%:31:6.592E-4:37:12:8:4:22 0/1:41:14:7:7:31:45.16%:50:9.1194E-6:35:17:8:9:31 0/1:42:15:11:4:29:50%:55:2.9161E-6:35:15:8:7:32 0/1:39:8:6:2:15:50%:29:1.2236E-3:34:8:5:3:19 0/1:38:11:4:7:24:45.83%:39:1.1047E-4:35:13:6:7:24 0/1:40:13:8:5:25:52%:48:1.4654E-5:35:12:9:3:28 0/1:39:12:6:6:24:48%:43:4.2836E-5:40:13:6:7:26 0/1:39:13:10:3:22:59.09%:50:9.5813E-6:36:9:4:5:23 0/1:43:7:4:3:10:63.64%:27:1.935E-3:35:4:2:2:11 0/1:40:18:13:5:30:60%:70:9.3503E-8:36:12:8:4:31 0/1:40:11:5:6:17:64.71%:43:4.3258E-5:39:6:4:2:19 0/1:42:19:12:7:34:55.88%:72:5.5375E-8:37:15:6:9:34 0/1:34:13:10:3:21:59.09%:50:9.5813E-6:40:9:5:4:26 0/1:40:12:9:3:23:52.17%:44:3.4748E-5:38:11:4:7:24 0/0:38:6:2:4:33:18.18%:23:1.219E-2:37:27:12:15:35 0/1:37:19:11:8:31:59.38%:73:3.9837E-8:39:13:11:2:33 0/1:43:14:6:8:22:63.64%:55:2.7817E-6:36:8:5:3:22 0/1:40:22:14:8:34:64.71%:88:1.3675E-9:41:12:3:9:36 0/1:43:13:8:5:23:56.52%:49:1.1242E-5:37:10:8:2:23 0/1:41:9:4:5:14:60%:34:3.4983E-4:40:6:4:2:17 0/1:42:9:5:4:27:32.14%:30:9.1169E-4:42:19:9:10:29 0/1:44:8:5:3:27:29.63%:26:2.076E-3:43:18:10:8:27 0/1:42:22:12:10:33:66.67%:89:1.0623E-9:35:11:5:6:34 0/1:49:11:8:3:18:61.11%:42:5.2969E-5:35:7:4:3:18 0/1:44:20:11:9:26:76.92%:87:1.8273E-9:35:6:5:1:26 0/1:41:20:10:10:33:58.82%:77:1.6951E-8:39:14:4:10:35 0/1:43:26:12:14:38:66.67%:99:2.3331E-11:43:13:7:6:40 0/1:42:16:6:10:30:53.33%:60:9.7202E-7:40:14:4:10:33 MTB_anc 569897 . C T . PASS AC=6;AF=0.020;AN=298;ANN=T|intergenic_region|MODIFIER|Rv0480c_Rv0480c-Rv0481c_Rv0481c|gene494-gene495|intergenic_region|gene494-gene495|||n.569897C>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:9:0%:18:1E0:47:9:5:4:9 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:33 0/0:32:2:1:1:17:11.76%:18:2.4242E-1:46:15:8:7:17 0/0:38:1:0:1:24:4.17%:34:5E-1:40:23:13:10:24 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:15 0/0:37:1:1:0:25:4%:38:5E-1:42:24:13:11:25 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/1:39:10:6:4:19:52.63%:37:1.9541E-4:48:9:2:7:19 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:18 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:11 0/0:38:1:0:1:29:3.45%:45:5E-1:38:28:14:14:30 0/0:0:0:0:0:10:0%:17:1E0:47:10:6:4:10 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:23 0/0:24:1:1:0:12:8.33%:14:5E-1:42:11:7:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:28:1:1:0:10:10%:11:5E-1:44:9:6:3:10 0/0:0:0:0:0:16:0%:29:1E0:49:16:9:7:16 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:16:5:21 0/0:31:1:1:0:22:4.55%:31:5E-1:46:21:15:6:22 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:40 0/0:0:0:0:0:14:0%:25:1E0:41:14:9:5:15 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/1:34:7:5:2:11:63.64%:27:1.935E-3:38:4:4:0:11 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:25:7:33 0/0:33:1:0:1:26:3.85%:38:5E-1:42:25:16:9:27 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/0:36:1:1:0:17:5.88%:24:5E-1:46:16:9:7:19 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:37:1:1:0:31:3.23%:48:5E-1:43:30:21:9:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:34 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:16 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:33:1:1:0:36:2.78%:55:5E-1:40:35:24:11:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:26 0/0:0:0:0:0:16:0%:29:1E0:45:16:5:11:18 0/0:32:2:2:0:31:6.45%:40:2.459E-1:41:29:18:11:31 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:44 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:32:1:1:0:22:4.55%:31:5E-1:42:21:12:9:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:36:3:1:2:18:16.67%:14:1.1429E-1:43:15:8:7:18 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:25 0/0:0:0:0:0:10:0%:17:1E0:45:10:1:9:11 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/1:38:13:6:7:36:36.11%:44:3.2589E-5:46:23:13:10:37 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:39:1:0:1:35:2.86%:55:5E-1:45:34:14:20:36 0/0:37:1:1:0:14:7.14%:17:5E-1:44:13:6:7:15 0/0:45:5:3:2:12:41.67%:3:1.8634E-2:40:7:4:3:12 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:15 0/0:60:1:1:0:25:4%:38:5E-1:45:24:16:8:25 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:27 0/0:0:0:0:0:18:0%:32:1E0:39:18:10:8:19 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:27 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:26 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:23 0/0:32:1:1:0:25:4%:38:5E-1:46:24:12:12:25 0/0:38:1:0:1:25:4%:38:5E-1:40:24:13:11:27 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:10:0%:17:1E0:43:10:4:6:10 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:15:0%:29:1E0:47:15:8:7:15 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:19 0/0:31:1:0:1:40:2.5%:62:5E-1:40:39:20:19:40 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:33:1:0:1:13:7.69%:18:5E-1:45:12:7:5:13 0/0:0:0:0:0:17:0%:33:1E0:34:17:8:9:18 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:35:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:15:0%:29:1E0:43:15:10:5:15 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:15:0%:29:1E0:36:15:10:5:15 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:15 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:26 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:18 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:20 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:15 0/0:0:0:0:0:26:0%:47:1E0:35:26:12:14:26 0/0:0:0:0:0:19:0%:37:1E0:36:19:10:9:19 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:24 0/0:0:0:0:0:13:0%:25:1E0:44:13:8:5:14 0/0:0:0:0:0:37:0%:70:1E0:38:37:26:11:39 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:29 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:14:0%:25:1E0:40:14:5:9:14 0/0:34:1:0:1:27:3.7%:41:5E-1:38:26:14:12:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:16:5:22 0/0:0:0:0:0:18:0%:32:1E0:37:18:14:4:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:36:24:14:10:27 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:17 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 0/0:0:0:0:0:26:0%:47:1E0:37:26:18:8:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:21 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:31 0/0:0:0:0:0:17:0%:33:1E0:36:17:12:5:17 0/0:0:0:0:0:22:0%:40:1E0:38:22:15:7:22 0/1:32:13:5:8:32:40.62%:45:2.6443E-5:35:19:11:8:34 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:32 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:29 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:0:0:0:0:12:0%:21:1E0:44:12:6:6:13 0/1:41:11:5:6:30:36.67%:37:1.594E-4:38:19:11:8:31 0/1:41:11:4:7:25:44%:39:1.1933E-4:42:14:9:5:26 0/0:31:1:0:1:29:3.45%:45:5E-1:40:28:16:12:29 0/0:31:1:1:0:14:7.14%:17:5E-1:44:13:10:3:14 0/0:31:1:1:0:28:3.57%:41:5E-1:40:27:15:12:29 0/0:31:1:1:0:31:3.23%:48:5E-1:40:30:16:14:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:33:1:0:1:22:4.55%:31:5E-1:40:21:10:11:22 MTB_anc 570598 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|murB_Rv0482|gene496|transcript|Transcript_gene496|Coding|1/1|c.60G>A|p.Pro20Pro|60/1110|60/1110|20/369||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.570598G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.570598G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:43 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:43:0%:82:1E0:46:43:25:18:43 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:33:0%:63:1E0:49:33:18:15:34 0/0:0:0:0:0:27:0%:52:1E0:51:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:48:0%:89:1E0:46:48:25:23:49 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:17 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:41 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:27 0/0:0:0:0:0:34:0%:62:1E0:48:34:15:19:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:50 0/0:0:0:0:0:29:0%:55:1E0:50:29:18:11:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:39 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:33 0/0:39:1:1:0:20:5%:27:5E-1:47:19:10:9:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:33:1:1:0:36:2.78%:55:5E-1:43:35:15:20:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:39:1:1:0:66:1.52%:99:5E-1:48:65:32:33:68 0/0:0:0:0:0:50:0%:92:1E0:47:50:29:21:51 0/0:0:0:0:0:46:0%:85:1E0:46:46:19:27:46 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:40:0%:74:1E0:47:40:17:23:42 0/0:0:0:0:0:21:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:30:11:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:17:9:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:46 0/0:0:0:0:0:32:0%:59:1E0:48:32:21:11:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:46 0/0:0:0:0:0:39:0%:74:1E0:51:39:16:23:40 0/0:0:0:0:0:35:0%:67:1E0:47:35:22:13:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:43 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:45:0%:85:1E0:47:45:21:24:46 0/0:0:0:0:0:72:0%:99:1E0:46:72:40:32:72 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:38 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:17 0/0:38:1:0:1:24:4.17%:34:5E-1:45:23:10:13:24 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:39:0%:74:1E0:47:39:26:13:39 0/0:0:0:0:0:17:0%:33:1E0:50:17:10:7:17 0/0:0:0:0:0:39:0%:74:1E0:50:39:24:15:39 0/0:0:0:0:0:52:0%:96:1E0:42:52:33:19:53 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:44 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:38 0/0:60:1:0:1:43:2.33%:70:5E-1:45:42:22:20:43 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:20:6:26 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:37 0/0:0:0:0:0:41:0%:78:1E0:46:41:27:14:41 0/0:0:0:0:0:24:0%:44:1E0:50:24:7:17:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:45 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:41 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:48 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:41 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:38 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:25:12:37 0/0:0:0:0:0:51:0%:97:1E0:45:51:22:29:51 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:42 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:41 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:33 0/0:0:0:0:0:52:0%:96:1E0:38:52:23:29:53 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:44 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:26 0/0:0:0:0:0:55:0%:99:1E0:44:55:31:24:56 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:31 0/0:0:0:0:0:42:0%:77:1E0:39:42:26:16:48 0/0:0:0:0:0:38:0%:70:1E0:38:38:16:22:38 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:45 0/0:0:0:0:0:35:0%:67:1E0:38:35:24:11:36 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:43 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:45 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:39 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:61:0%:99:1E0:42:61:34:27:63 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:48 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:30 0/0:0:0:0:0:50:0%:92:1E0:37:50:27:23:50 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:31 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 0/0:36:1:0:1:49:2.04%:80:5E-1:42:48:27:21:49 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:48 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:47 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:52 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:38 MTB_anc 571107 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|murB_Rv0482|gene496|transcript|Transcript_gene496|Coding|1/1|c.569C>T|p.Thr190Ile|569/1110|569/1110|190/369||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.571107C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.571107C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:54:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:53:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:11:5:6:12:91.67%:58:1.4176E-6:0:0:0:0:12 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:25:14:11:26:96.15%:99:5.4444E-14:38:1:0:1:27 1/1:47:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:24:14:10:25:96%:99:2.0568E-13:32:1:0:1:26 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:45:27:18:46:97.83%:99:1.1441E-25:36:1:1:0:47 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:51:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:50:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 MTB_anc 573384 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0484c_Rv0484c|gene498|transcript|Transcript_gene498|Coding|1/1|c.418C>A|p.Leu140Ile|418/756|418/756|140/251||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.573384G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.573384G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:56:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:49:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:49:24:25:50:100%:99:3.925E-29:0:0:0:0:50 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:53:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:51:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:15:20:36:97.22%:99:8.9137E-21:0:0:0:0:38 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:37:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 MTB_anc 580772 . T A . PASS AC=297;AF=0.990;AN=300;ANN=A|intergenic_region|MODIFIER|senX3_Rv0490-regX3_Rv0491|gene504-gene505|intergenic_region|gene504-gene505|||n.580772T>A||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:16:5:11:17:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:15:0%:29:1E0:50:15:8:7:16 1/1:49:19:11:8:20:95%:98:1.5234E-10:51:1:1:0:21 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:18:10:8:19:100%:99:1.1019E-10:0:0:0:0:21 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 0/1:46:8:4:4:9:88.89%:36:2.0568E-4:37:1:0:1:9 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:17:15:33:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:42:19:23:43:100%:99:5.9562E-25:0:0:0:0:45 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:10:15:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:17:7:10:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:20:12:8:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:21:14:7:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:13:16:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:11:5:6:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:17:9:8:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:13:6:7:14:92.86%:64:3.7391E-7:60:1:0:1:16 1/1:43:21:6:15:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:51:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:25:11:14:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:28:13:15:31:93.33%:99:4.194E-15:48:2:2:0:32 1/1:46:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:52:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:33:11:22:34:97.06%:99:1.2301E-18:33:1:0:1:36 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:29:10:19:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:24:11:13:25:96%:99:2.0568E-13:33:1:0:1:28 1/1:41:19:10:9:20:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:52:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:48:21:10:11:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:14:13:28:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:25:12:13:27:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:13:3:10:14:92.86%:64:3.7391E-7:37:1:1:0:16 1/1:47:20:7:13:21:95.24%:99:4.0873E-11:60:1:1:0:22 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:11:13:25:100%:99:3.101E-14:0:0:0:0:26 1/1:44:16:12:4:17:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:22:10:12:23:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:24:6:18:26:96%:99:2.0568E-13:60:1:0:1:30 1/1:38:15:2:13:16:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:26:13:13:27:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:16:19:36:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:19:8:11:20:100%:99:2.8292E-11:0:0:0:0:22 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:16:14:31:96.77%:99:6.8754E-17:38:1:1:0:33 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:29:17:12:30:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:30:20:10:31:100%:99:8.4556E-18:0:0:0:0:34 1/1:40:16:10:6:17:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:28:12:16:29:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:44:17:9:8:18:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:47:15:32:48:97.92%:99:6.1512E-28:0:0:0:0:48 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:28:17:11:30:96.55%:99:9.9776E-16:33:1:1:0:33 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:47:23:8:15:24:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:13:18:33:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:11:8:3:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:36 1/1:42:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 580773 . GGGGGCACCACCCGCTTGCGGGGGA G . PASS AC=296;AF=0.987;AN=300;ANN=G|intergenic_region|MODIFIER|senX3_Rv0490-regX3_Rv0491|gene504-gene505|intergenic_region|gene504-gene505|||n.580774_580797delGGGGCACCACCCGCTTGCGGGGGA||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:17:10:7:14:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:17:6:11:18:100%:93:4.2852E-10:0:0:0:0:18 0/0:0:0:0:0:15:0%:29:1E0:49:15:8:7:16 1/1:48:19:11:8:19:95%:98:1.5234E-10:70:1:1:0:21 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:18:10:8:20:90%:87:1.6758E-9:65:2:1:1:21 1/1:47:33:16:17:32:100%:99:1.3852E-19:0:0:0:0:33 0/1:46:8:4:4:9:88.89%:36:2.0568E-4:33:1:0:1:9 1/1:47:36:18:18:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:15:8:7:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:23:7:16:25:92%:99:2.7767E-12:35:2:1:1:25 1/1:46:30:15:15:31:96.77%:99:6.8754E-17:34:1:1:0:32 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:18:7:11:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:21:10:11:22:95.45%:99:1.0931E-11:36:1:0:1:22 1/1:42:29:17:12:29:93.55%:99:1.1344E-15:54:2:1:1:31 1/1:46:46:22:24:47:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:10:15:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:13:5:8:13:92.86%:64:3.7391E-7:34:1:1:0:14 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:43:15:7:8:18:88.24%:71:7.3277E-8:47:2:0:2:18 1/1:46:20:12:8:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:17:7:10:18:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:21:14:7:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:17:5:12:15:94.44%:86:2.0936E-9:33:1:0:1:18 1/1:41:29:15:14:30:96.67%:99:2.6212E-16:29:1:0:1:30 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:13:16:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:44:18:26:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:12:15:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:11:5:6:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:18:9:9:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:17:9:8:18:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:21:6:15:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:18:9:9:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:46:24:11:13:23:100%:99:3.101E-14:0:0:0:0:24 1/1:51:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:20:7:13:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:33:14:19:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:9:17:26:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:28:12:16:29:90.32%:99:1.2857E-14:44:3:3:0:32 1/1:46:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:13:12:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:19:9:10:20:95%:98:1.5234E-10:35:1:0:1:20 1/1:46:37:14:23:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:18:5:13:19:94.74%:92:5.6585E-10:60:1:0:1:19 1/1:46:31:17:14:30:96.88%:99:1.8007E-17:75:1:1:0:32 1/1:52:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:13:16:29:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:25:13:12:27:92.59%:99:2.0853E-13:35:2:1:1:27 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:21:7:14:21:95.45%:99:1.0931E-11:37:1:1:0:22 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:35:11:24:32:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:17:7:10:17:94.44%:86:2.0936E-9:29:1:1:0:18 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:9:19:30:96.55%:99:9.9776E-16:35:1:1:0:30 1/1:43:27:12:15:27:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:42:19:10:9:20:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:15:8:7:16:93.75%:75:2.8282E-8:34:1:0:1:16 1/1:46:25:11:14:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:18:12:6:18:94.74%:92:5.6585E-10:74:1:1:0:19 1/1:52:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:31:15:16:32:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:47:21:10:11:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:39:15:24:41:95.12%:99:2.1258E-21:35:2:1:1:41 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:23:12:11:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:25:12:13:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:40:29:13:16:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:15:13:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:19:12:7:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:25:12:13:26:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:26:11:15:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:15:5:10:13:93.75%:75:2.8282E-8:33:1:1:0:16 1/1:47:21:8:13:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:15:14:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:12:13:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:17:11:6:18:94.44%:86:2.0936E-9:62:1:1:0:19 1/1:37:23:10:13:22:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:27:12:15:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:42:21:11:10:22:95.45%:99:1.0931E-11:33:1:0:1:22 1/1:40:28:8:20:30:96.55%:99:9.9776E-16:60:1:0:1:30 1/1:35:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:27:12:15:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:42:36:16:20:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:22:9:13:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:19:12:7:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:18:14:32:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:30:11:19:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:40:22:18:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:30:18:12:31:96.77%:99:6.8754E-17:32:1:0:1:32 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:33:23:10:30:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:17:10:7:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:29:12:17:30:96.67%:99:2.6212E-16:37:1:1:0:31 1/1:39:28:12:16:29:90.32%:99:1.2857E-14:32:3:3:0:31 1/1:43:17:9:8:17:94.44%:86:2.0936E-9:35:1:1:0:19 1/1:42:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:18:13:32:96.88%:99:1.8007E-17:36:1:1:0:33 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:12:13:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:47:23:8:15:24:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:27:15:12:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:14:12:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:12:18:32:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:11:8:3:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:22:11:11:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:46:23:23:46:97.87%:99:2.9526E-26:76:1:1:0:47 1/1:41:35:16:19:36:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:41:26:6:20:25:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 584171 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0493c_Rv0493c|gene508|transcript|Transcript_gene508|Coding|1/1|c.520G>A|p.Gly174Ser|520/990|520/990|174/329||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.584171C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.584171C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:47:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:53:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:50:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:63:32:31:63:100%:99:1.657E-37:0:0:0:0:65 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:37:19:18:38:97.37%:99:5.6582E-21:36:1:1:0:39 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:35:16:19:36:97.22%:99:8.3613E-20:60:1:1:0:37 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:54:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:55:20:35:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:49:29:20:49:100%:99:3.925E-29:0:0:0:0:53 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:48:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:39:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 584511 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv0493c_Rv0493c|gene508|transcript|Transcript_gene508|Coding|1/1|c.180A>C|p.Thr60Thr|180/990|180/990|60/329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.584511T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.584511T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:25:13:12:26:96.15%:99:7.9107E-15:0:0:0:0:28 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:61:34:27:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:37:22:15:38:97.37%:99:5.7269E-22:0:0:0:0:41 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:49:26:23:50:100%:99:3.925E-29:0:0:0:0:50 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:8:19:28:96.43%:99:3.7915E-15:30:1:1:0:28 1/1:41:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:14:17:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:36:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:48:13:35:49:97.96%:99:1.9625E-27:38:1:0:1:50 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 590763 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|proC_Rv0500|gene515|transcript|Transcript_gene515|Coding|1/1|c.681C>G|p.Asp227Glu|681/888|681/888|227/295||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.590763C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.590763C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:62:42:20:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:42:29:13:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:40:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:32:15:17:33:96.97%:99:5.4567E-19:0:0:0:0:35 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:24:21:3:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:47:35:12:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 592453 . T G . PASS AC=100;AF=0.333;AN=300;ANN=G|missense_variant|MODERATE|galE2_Rv0501|gene517|transcript|Transcript_gene517|Coding|1/1|c.800T>G|p.Ile267Ser|800/1131|800/1131|267/376||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.592453T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.592453T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:44:59:35:24:60 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 1/1:46:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:52 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:34 0/0:0:0:0:0:38:0%:70:1E0:47:38:24:14:39 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:42:0%:77:1E0:47:42:25:17:44 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:34 0/0:0:0:0:0:46:0%:85:1E0:42:46:17:29:46 0/0:0:0:0:0:20:0%:36:1E0:55:20:12:8:20 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:44 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:18:0%:32:1E0:42:18:4:14:18 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:28 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:47 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:7:19:26 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:38 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:39 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 1/1:49:34:18:16:35:97.14%:99:3.2089E-19:50:1:1:0:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:37 0/0:0:0:0:0:77:0%:99:1E0:44:77:34:43:79 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:49 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:43:0%:82:1E0:46:43:33:10:44 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:40 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:38 0/0:0:0:0:0:55:0%:99:1E0:45:55:20:35:55 0/0:60:1:1:0:45:2.22%:73:5E-1:45:44:28:16:46 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:48 0/0:0:0:0:0:33:0%:63:1E0:50:33:18:15:35 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:51:0%:97:1E0:45:51:24:27:52 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:53 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:48:0%:89:1E0:41:48:16:32:49 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:50 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:42 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:37 0/0:0:0:0:0:44:0%:81:1E0:47:44:21:23:45 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:45:0%:85:1E0:48:45:25:20:47 0/0:0:0:0:0:68:0%:99:1E0:48:68:34:34:70 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:20 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:38:2:0:2:40:5%:53:2.4684E-1:53:38:18:20:40 0/0:0:0:0:0:19:0%:37:1E0:49:19:13:6:19 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:22 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:40 0/0:36:1:1:0:47:2.13%:77:5E-1:45:46:26:20:48 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:34 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:46 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 0/0:0:0:0:0:21:0%:40:1E0:48:21:14:7:22 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:45 0/0:38:1:0:1:38:2.63%:58:5E-1:43:37:20:17:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:41 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:36:0%:66:1E0:47:36:22:14:37 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:20:16:37:97.3%:99:2.1762E-20:60:1:0:1:38 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:51 0/0:0:0:0:0:45:0%:85:1E0:41:45:28:17:46 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:44:0%:81:1E0:38:44:18:26:45 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:37:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:45 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:45 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:40 0/0:38:1:0:1:41:2.44%:66:5E-1:39:40:19:21:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:40:0%:74:1E0:38:40:20:20:41 0/0:0:0:0:0:51:0%:97:1E0:42:51:20:31:53 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:45 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:34 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:39 0/0:0:0:0:0:50:0%:92:1E0:42:50:29:21:51 0/0:0:0:0:0:61:0%:99:1E0:43:61:31:30:64 0/0:0:0:0:0:41:0%:78:1E0:39:41:20:21:43 MTB_anc 593036 . G A . PASS AC=68;AF=0.227;AN=300;ANN=A|synonymous_variant|LOW|Rv0502_Rv0502|gene518|transcript|Transcript_gene518|Coding|1/1|c.246G>A|p.Ala82Ala|246/1077|246/1077|82/358||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.593036G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.593036G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:43:52:16:36:54 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 1/1:43:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:7:12:19 0/0:38:1:0:1:35:2.86%:55:5E-1:50:34:18:16:35 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:39 0/0:0:0:0:0:20:0%:36:1E0:52:20:8:12:20 0/0:0:0:0:0:53:0%:99:1E0:47:53:14:39:56 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:26 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:19 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:41 0/0:24:1:1:0:25:4%:38:5E-1:47:24:11:13:26 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:17 0/0:39:1:0:1:22:4.55%:31:5E-1:45:21:8:13:22 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:15 0/0:0:0:0:0:22:0%:40:1E0:49:22:8:14:22 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 1/1:49:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:48:0%:89:1E0:44:48:19:29:49 0/0:0:0:0:0:59:0%:99:1E0:49:59:26:33:59 1/1:46:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 0/0:0:0:0:0:57:0%:99:1E0:44:57:26:31:57 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:50:0%:92:1E0:45:50:26:24:50 0/0:0:0:0:0:14:0%:25:1E0:41:14:8:6:14 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:57:0%:99:1E0:42:57:27:30:57 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:42 0/0:0:0:0:0:43:0%:82:1E0:48:43:24:19:43 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:28 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:50 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:66:0%:99:1E0:44:66:32:34:67 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:39:0%:74:1E0:47:39:23:16:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:15:26:41 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:59:0%:99:1E0:46:59:33:26:59 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:22:0%:40:1E0:48:22:7:15:22 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:51:31:20:11:31 0/0:0:0:0:0:32:0%:59:1E0:54:32:18:14:32 0/0:0:0:0:0:12:0%:21:1E0:47:12:5:7:12 0/0:0:0:0:0:27:0%:52:1E0:52:27:16:11:27 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:49 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:39:0%:74:1E0:44:39:13:26:39 0/0:0:0:0:0:55:0%:99:1E0:44:55:31:24:55 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 1/1:51:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:21 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:22:0%:40:1E0:52:22:10:12:22 0/0:0:0:0:0:51:0%:97:1E0:43:51:28:23:51 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:51 0/0:0:0:0:0:37:0%:70:1E0:49:37:19:18:37 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:23 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:39 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:25:10:36 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:43 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:37:1:0:1:42:2.38%:66:5E-1:45:41:18:23:43 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:23 0/0:0:0:0:0:69:0%:99:1E0:43:69:29:40:71 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:28 0/0:0:0:0:0:63:0%:99:1E0:40:63:26:37:65 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 0/0:0:0:0:0:44:0%:81:1E0:40:44:17:27:45 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:48 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:44 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:39 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:48:0%:89:1E0:37:48:27:21:50 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:40 0/0:0:0:0:0:47:0%:89:1E0:41:47:16:31:47 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:38:1:1:0:51:1.96%:84:5E-1:43:50:21:29:51 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:54 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:45 MTB_anc 594651 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|cmaA2_Rv0503c|gene519|transcript|Transcript_gene519|Coding|1/1|c.129C>T|p.Cys43Cys|129/909|129/909|43/302||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.594651G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.594651G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.594651G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:50 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:26 0/0:0:0:0:0:54:0%:99:1E0:47:54:25:29:54 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:18:0%:32:1E0:48:18:7:11:18 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:25 0/0:0:0:0:0:47:0%:89:1E0:51:47:22:25:48 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:49:38:19:19:39 0/0:0:0:0:0:54:0%:99:1E0:43:54:22:32:54 0/0:0:0:0:0:26:0%:47:1E0:45:26:7:19:26 0/0:0:0:0:0:61:0%:99:1E0:46:61:20:41:61 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:9:22:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:51:27:16:11:27 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:50:0%:92:1E0:44:50:21:29:52 0/0:0:0:0:0:25:0%:48:1E0:52:25:6:19:26 0/0:0:0:0:0:43:0%:82:1E0:46:43:20:23:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:22:0%:40:1E0:50:22:13:9:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:35:0%:67:1E0:51:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:29 0/0:0:0:0:0:38:0%:70:1E0:50:38:18:20:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:48:0%:89:1E0:46:48:28:20:50 0/0:0:0:0:0:66:0%:99:1E0:47:66:33:33:66 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:44 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:6:15:21 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:26 0/0:0:0:0:0:28:0%:51:1E0:49:28:11:17:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:42:0%:77:1E0:48:42:19:23:42 0/0:0:0:0:0:19:0%:37:1E0:49:19:7:12:19 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:31:0%:59:1E0:49:31:20:11:31 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:13:26:40 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:50:0%:92:1E0:43:50:20:30:52 0/0:0:0:0:0:18:0%:32:1E0:48:18:7:11:18 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:29 0/0:0:0:0:0:66:0%:99:1E0:44:66:25:41:66 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:17:0%:33:1E0:49:17:10:7:17 0/0:60:1:1:0:39:2.56%:62:5E-1:46:38:17:21:39 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:37 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:21 0/0:0:0:0:0:35:0%:67:1E0:49:35:19:16:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:7:12:20 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:8:18:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:20:1:0:1:38:2.63%:58:5E-1:41:37:16:21:38 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:36 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:43:0%:82:1E0:47:43:17:26:43 0/0:0:0:0:0:34:0%:62:1E0:47:34:11:23:34 0/0:0:0:0:0:42:0%:77:1E0:47:42:18:24:42 0/0:0:0:0:0:34:0%:62:1E0:51:34:18:16:34 0/0:0:0:0:0:55:0%:99:1E0:42:55:27:28:55 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:54:0%:99:1E0:43:54:20:34:54 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:45:0%:85:1E0:46:45:23:22:46 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:9:22:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:14:28:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:33 0/0:0:0:0:0:44:0%:81:1E0:46:44:25:19:45 0/0:0:0:0:0:34:0%:62:1E0:45:34:9:25:35 0/0:0:0:0:0:58:0%:99:1E0:41:58:28:30:61 0/0:0:0:0:0:50:0%:92:1E0:42:50:19:31:50 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:51 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:64:0%:99:1E0:42:64:33:31:64 0/0:0:0:0:0:63:0%:99:1E0:43:63:34:29:64 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:38 0/0:0:0:0:0:52:0%:96:1E0:40:52:17:35:52 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:40 0/0:0:0:0:0:50:0%:92:1E0:42:50:21:29:50 0/0:0:0:0:0:47:0%:89:1E0:41:47:18:29:49 0/0:0:0:0:0:39:0%:74:1E0:43:39:12:27:39 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:50 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:42 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:49 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:47 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:52 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:36 0/0:0:0:0:0:54:0%:99:1E0:39:54:23:31:54 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:42 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:12:32:46 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:44 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:51 0/0:0:0:0:0:30:0%:55:1E0:43:30:9:21:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:48 0/0:0:0:0:0:64:0%:99:1E0:42:64:27:37:64 0/0:0:0:0:0:44:0%:81:1E0:44:44:16:28:45 MTB_anc 596214 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|serB1_Rv0505c|gene521|transcript|Transcript_gene521|Coding|1/1|c.372C>T|p.Ala124Ala|372/1122|372/1122|124/373||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.596214G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.596214G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:45 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:19 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:35 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:29 0/0:60:1:1:0:29:3.45%:45:5E-1:42:28:14:14:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:42 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:18 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:45 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:32 0/0:0:0:0:0:39:0%:74:1E0:47:39:23:16:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:49:0%:93:1E0:39:49:27:22:52 0/0:0:0:0:0:20:0%:36:1E0:43:20:14:6:20 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:23 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:23 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:14 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:24:13:37 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:44 0/0:0:0:0:0:45:0%:85:1E0:39:45:29:16:45 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:40 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:26:12:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:15:29:44 0/0:0:0:0:0:42:0%:77:1E0:42:42:28:14:43 0/0:0:0:0:0:43:0%:82:1E0:44:43:27:16:44 0/0:0:0:0:0:11:0%:22:1E0:47:11:6:5:11 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:41 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:57:0%:99:1E0:42:57:31:26:57 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:32 0/0:0:0:0:0:39:0%:74:1E0:40:39:26:13:43 0/0:0:0:0:0:44:0%:81:1E0:41:44:29:15:44 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:0:0:0:0:49:0%:93:1E0:39:49:25:24:51 0/0:0:0:0:0:32:0%:59:1E0:47:32:21:11:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:36 0/0:0:0:0:0:50:0%:92:1E0:45:50:26:24:50 0/0:0:0:0:0:30:0%:55:1E0:48:30:22:8:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:12:23:35 0/0:0:0:0:0:67:0%:99:1E0:43:67:37:30:67 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:15 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:8:20:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:48 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:47 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:35 0/0:0:0:0:0:66:0%:99:1E0:42:66:32:34:66 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:38 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:47 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:41 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:36:0%:66:1E0:48:36:22:14:37 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:42 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:21 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:44 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:50 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:39 0/0:0:0:0:0:39:0%:74:1E0:41:39:26:13:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:21:9:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:21:0%:40:1E0:44:21:17:4:21 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:22:9:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:42 0/0:0:0:0:0:34:0%:62:1E0:38:34:12:22:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:25:7:34 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:24 0/0:0:0:0:0:38:0%:70:1E0:38:38:18:20:38 0/0:0:0:0:0:55:0%:99:1E0:41:55:35:20:55 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:36 0/0:0:0:0:0:15:0%:29:1E0:42:15:9:6:16 0/0:0:0:0:0:54:0%:99:1E0:40:54:25:29:55 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:35 0/0:0:0:0:0:53:0%:99:1E0:42:53:29:24:55 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:41 0/0:0:0:0:0:53:0%:99:1E0:39:53:30:23:54 0/0:0:0:0:0:41:0%:78:1E0:38:41:27:14:41 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:46 0/0:0:0:0:0:35:0%:67:1E0:38:35:20:15:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:29 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:32 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:41 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:32:1:0:1:30:3.33%:44:5E-1:40:29:13:16:31 0/0:0:0:0:0:40:0%:74:1E0:38:40:20:20:42 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:45 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:35 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:48:0%:89:1E0:40:48:21:27:49 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:41 MTB_anc 599868 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|mmpL2_Rv0507|gene523|transcript|Transcript_gene523|Coding|1/1|c.2670G>A|p.Arg890Arg|2670/2907|2670/2907|890/968||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.599868G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.599868G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:18:5:13:19:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:32:20:12:33:96.97%:99:4.7095E-18:38:1:1:0:33 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:34:15:19:35:97.14%:99:3.2089E-19:60:1:0:1:36 1/1:47:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:35:20:15:36:97.22%:99:8.3613E-20:60:1:1:0:37 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:48:20:28:48:100%:99:1.554E-28:0:0:0:0:52 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:48:29:19:48:100%:99:1.554E-28:0:0:0:0:51 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:36:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 600688 . A C . PASS AC=72;AF=0.240;AN=300;ANN=C|missense_variant|MODERATE|hemA_Rv0509|gene525|transcript|Transcript_gene525|Coding|1/1|c.248A>C|p.Glu83Ala|248/1407|248/1407|83/468||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.600688A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.600688A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:42:40:27:13:40 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:24 0/0:0:0:0:0:58:0%:99:1E0:44:58:34:24:58 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:31:0%:59:1E0:52:31:18:13:31 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:8:18:26 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:43:0%:82:1E0:40:43:23:20:46 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:22:9:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:22 1/1:44:27:15:12:28:96.43%:99:3.7915E-15:60:1:0:1:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:21:8:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:17:6:24 0/0:0:0:0:0:59:0%:99:1E0:42:59:36:23:62 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:38 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:32:0%:59:1E0:44:32:22:10:32 1/1:47:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:15 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:24:8:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:44:0%:81:1E0:41:44:17:27:44 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:60:1:0:1:64:1.56%:99:5E-1:46:63:39:24:66 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:49 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:52 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:41:0%:78:1E0:43:41:28:13:41 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:45 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:43 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:36 0/0:0:0:0:0:18:0%:32:1E0:52:18:10:8:18 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:25:18:45 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:39 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:53 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:46 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:49 0/0:0:0:0:0:44:0%:81:1E0:47:44:30:14:44 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:43:0%:82:1E0:44:43:28:15:43 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:42 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:17:19:37:97.3%:99:2.1762E-20:37:1:1:0:37 1/1:45:68:44:24:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:51:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:22:9:32 1/1:50:29:16:13:30:96.67%:99:2.6212E-16:38:1:1:0:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:35 0/0:0:0:0:0:33:0%:63:1E0:48:33:23:10:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:26:11:37 1/1:43:40:19:21:41:97.56%:99:9.3017E-24:0:0:0:0:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:34 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:19:0%:37:1E0:49:19:7:12:19 0/0:0:0:0:0:46:0%:85:1E0:38:46:28:18:47 0/0:0:0:0:0:33:0%:63:1E0:44:33:24:9:33 0/0:0:0:0:0:54:0%:99:1E0:41:54:30:24:55 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:20:9:31 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:25 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:27:7:35 1/1:43:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:10:0%:17:1E0:40:10:7:3:10 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:40:31:23:8:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:19:7:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:18:6:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:35 0/0:0:0:0:0:39:0%:74:1E0:38:39:28:11:41 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:47 1/1:44:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:57 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:21:8:31 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:28:13:44 0/0:0:0:0:0:36:0%:66:1E0:38:36:19:17:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:36 0/0:0:0:0:0:40:0%:74:1E0:38:40:24:16:42 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:25 0/0:0:0:0:0:32:0%:59:1E0:38:32:23:9:32 1/1:41:40:31:9:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:39 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:58:0%:99:1E0:39:58:27:31:58 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:48 0/0:0:0:0:0:41:0%:78:1E0:41:41:28:13:41 1/1:41:52:36:16:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 1/1:38:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:52:0%:96:1E0:42:52:29:23:53 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:38 MTB_anc 600950 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|synonymous_variant|LOW|hemA_Rv0509|gene525|transcript|Transcript_gene525|Coding|1/1|c.510G>A|p.Leu170Leu|510/1407|510/1407|170/468||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.600950G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.600950G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 1/1:45:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:17 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:27 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:20 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:24:0%:44:1E0:43:24:6:18:24 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:33 1/1:41:47:14:33:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:22 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 1/1:42:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:48:14:34:48:100%:99:1.554E-28:0:0:0:0:50 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 1/1:44:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:43 0/0:0:0:0:0:44:0%:81:1E0:49:44:22:22:45 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:26:0%:47:1E0:44:26:8:18:26 1/1:40:46:11:35:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:21:7:14:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:55:0%:99:1E0:40:54:21:33:55 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:52:19:33:53:98.11%:99:8.609E-30:37:1:0:1:53 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:29 0/0:0:0:0:0:54:0%:99:1E0:43:54:18:36:54 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:36 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:28 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:49:27:7:20:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:27:0%:52:1E0:49:27:10:17:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:32 1/1:42:17:5:12:18:94.44%:86:2.0936E-9:60:1:1:0:18 0/0:0:0:0:0:35:0%:67:1E0:46:35:13:22:35 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:31:14:17:33:93.94%:99:8.2416E-17:49:2:2:0:33 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:40:38:11:27:39 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:7:19:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:46:0%:85:1E0:46:46:24:22:46 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:6:22:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:28 0/0:0:0:0:0:42:0%:77:1E0:41:42:13:29:44 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:32 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:22 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:40 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:7:20:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:43 0/0:0:0:0:0:40:0%:74:1E0:39:40:12:28:41 0/0:0:0:0:0:34:0%:62:1E0:38:34:11:23:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:32 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:21 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:9:26:35 0/0:0:0:0:0:24:0%:44:1E0:39:24:6:18:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 1/1:39:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 0/0:0:0:0:0:41:0%:78:1E0:38:41:14:27:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 607699 . GA G . PASS AC=10;AF=0.263;AN=38;ANN=G|frameshift_variant|HIGH|Rv0515_Rv0515|gene531|transcript|Transcript_gene531|Coding|1/1|c.1153delA|p.Thr385fs|1153/1512|1153/1512|385/503||INFO_REALIGN_3_PRIME,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.607700delA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.607700delA||||||;HET=0;LOF=(Rv0515_Rv0515|gene531|1|1.00);set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:35:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:7:0%:14:1E0:37:7:7:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:9:0%:18:1E0:37:9:9:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:8:7:1:7:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:12:0:12:92.31%:58:1.3461E-6:39:1:1:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:37:7:7:0:7 0/0:0:0:0:0:7:0%:14:1E0:38:7:7:0:7 0/0:0:0:0:0:9:0%:18:1E0:38:9:9:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:7:0%:14:1E0:36:7:7:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:10:0%:17:1E0:36:10:10:0:10 0/0:0:0:0:0:14:0%:25:1E0:38:14:14:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 0/0:0:0:0:0:9:0%:18:1E0:37:9:9:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:38:9:9:0:9 0/0:0:0:0:0:9:0%:18:1E0:37:9:9:0:9 MTB_anc 612549 . CCGGT C . PASS AC=282;AF=0.940;AN=300;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.612550_612553delCGGT||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.612550_612553delCGGT||||||,C|intergenic_region|MODIFIER|Rv0519c_Rv0519c-gabP_Rv0522|gene535-gene536|intergenic_region|gene535-gene536|||n.612550_612553delCGGT||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:42:23:19:42:97.67%:99:6.6289E-24:37:1:1:0:43 0/1:51:14:5:9:16:87.5%:65:2.5454E-7:35:2:1:1:16 1/1:48:48:18:30:51:92.31%:99:2.3201E-25:41:4:1:3:52 1/1:48:27:11:16:29:90%:99:4.6134E-14:33:3:3:0:30 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:23:9:14:25:92%:99:2.7767E-12:37:2:2:0:26 1/1:50:29:13:16:30:96.67%:99:2.6212E-16:60:1:1:0:30 0/1:44:26:9:17:29:89.66%:99:1.6496E-13:43:3:2:1:29 0/1:49:26:14:12:29:86.67%:99:3.9214E-13:47:4:3:1:30 1/1:47:34:16:18:36:91.89%:99:5.6582E-18:43:3:2:1:37 1/1:51:27:12:15:28:96.43%:99:3.7915E-15:37:1:1:0:28 1/1:45:44:19:25:44:97.78%:99:4.4304E-25:33:1:1:0:45 1/1:55:20:11:9:22:90.91%:98:1.3117E-10:35:2:2:0:22 1/1:45:50:27:23:54:92.59%:99:1.7068E-26:47:4:3:1:54 1/1:47:26:12:14:27:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:44:30:14:16:32:93.75%:99:3.0612E-16:33:2:2:0:32 1/1:46:20:8:12:21:95.24%:99:4.0873E-11:39:1:0:1:21 1/1:48:25:9:16:26:96.15%:99:5.4444E-14:33:1:1:0:26 0/1:46:23:12:11:26:88.46%:99:7.3681E-12:43:3:1:2:26 1/1:48:23:8:15:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:18:14:4:20:90%:87:1.6758E-9:34:2:1:1:20 1/1:47:55:26:29:54:98.21%:99:1.4593E-31:32:1:0:1:56 1/1:48:30:18:12:33:90.91%:99:9.89E-16:32:3:0:3:33 1/1:49:36:19:17:37:97.3%:99:2.1762E-20:37:1:0:1:37 1/1:47:22:13:9:22:95.65%:99:2.9149E-12:33:1:1:0:23 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:15:4:11:13:100%:81:6.4467E-9:0:0:0:0:15 0/1:43:26:12:14:29:86.67%:99:3.9214E-13:42:4:2:2:30 1/1:44:31:17:14:34:91.18%:99:2.7308E-16:37:3:2:1:34 1/1:45:33:14:19:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:14:9:25:92%:99:2.7767E-12:35:2:1:1:25 1/1:50:24:13:11:26:92.31%:99:7.6222E-13:47:2:1:1:26 1/1:49:31:13:18:33:93.94%:99:8.2416E-17:48:2:1:1:33 1/1:49:35:20:15:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:44:27:11:16:28:96.43%:99:3.7915E-15:37:1:1:0:28 1/1:43:42:21:21:43:93.33%:99:1.6658E-22:35:3:1:2:45 1/1:48:51:25:26:56:91.07%:99:1.5231E-26:36:5:3:2:56 1/1:48:52:29:23:52:98.11%:99:8.609E-30:37:1:0:1:53 0/1:45:34:20:14:40:85%:99:8.7127E-17:41:6:3:3:40 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:59:24:35:62:95.16%:99:2.8722E-32:43:3:1:2:63 1/1:43:18:10:8:19:94.74%:92:5.6585E-10:37:1:1:0:19 0/1:44:21:10:11:24:87.5%:99:9.0704E-11:43:3:1:2:24 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:12:15:28:96.43%:99:3.7915E-15:37:1:1:0:28 1/1:48:24:14:10:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:42:34:13:21:35:94.44%:99:1.5887E-18:48:2:1:1:36 1/1:42:37:19:18:38:94.87%:99:3.0128E-20:37:2:1:1:39 1/1:51:37:23:14:39:92.5%:99:1.1479E-19:34:3:2:1:40 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:25:16:9:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:51:29:8:21:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:12:18:32:93.75%:99:3.0612E-16:36:2:1:1:32 1/1:39:23:8:15:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:37:17:20:39:94.87%:99:3.0128E-20:35:2:2:0:39 1/1:37:24:12:12:23:96%:99:2.0568E-13:39:1:1:0:25 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:39:23:16:40:95.12%:99:2.1258E-21:37:2:0:2:41 0/1:45:24:13:11:27:88.89%:99:2.0853E-12:35:3:1:2:27 1/1:47:28:12:16:29:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:46:28:12:16:29:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:39:16:23:40:95.12%:99:2.1258E-21:31:2:0:2:41 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:56:24:32:58:96.55%:99:2.8822E-31:36:2:0:2:58 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:38:18:20:40:92.68%:99:3.1178E-20:34:3:0:3:41 1/1:50:17:11:6:17:94.44%:86:2.0936E-9:60:1:0:1:18 0/1:47:16:5:11:18:88.89%:76:2.0936E-8:36:2:1:1:18 1/1:45:31:17:14:32:93.94%:99:8.2416E-17:37:2:2:0:34 1/1:50:30:12:18:30:96.77%:99:6.8754E-17:34:1:1:0:31 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:37:15:22:38:97.37%:99:5.6582E-21:60:1:0:1:38 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:24:14:10:23:96%:99:2.0568E-13:60:1:1:0:25 1/1:43:31:15:16:31:96.88%:99:1.8007E-17:33:1:1:0:32 1/1:51:31:17:14:33:93.94%:99:8.2416E-17:46:2:0:2:33 1/1:44:17:7:10:18:94.44%:86:2.0936E-9:36:1:1:0:18 0/1:43:22:12:10:26:84.62%:99:5.5261E-11:40:4:3:1:26 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:17:12:31:93.55%:99:1.1344E-15:32:2:1:1:32 1/1:46:21:13:8:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:19:10:9:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:33:15:18:33:97.06%:99:1.2301E-18:37:1:1:0:34 0/1:41:22:11:11:24:88%:99:2.5916E-11:37:3:1:2:25 1/1:46:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:26 0/1:50:35:20:15:40:87.5%:99:1.1364E-17:40:5:4:1:40 1/1:54:25:14:11:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:54:26:16:10:27:92.86%:99:1.4382E-14:39:1:0:1:27 1/1:41:43:19:24:43:97.73%:99:1.7144E-24:37:1:0:1:44 1/1:44:28:17:11:31:90.32%:99:1.2857E-14:36:3:1:2:31 1/1:46:57:22:35:57:96.61%:99:7.5133E-32:37:2:2:0:59 0/1:45:28:16:12:32:87.5%:99:3.2142E-14:35:4:3:1:32 1/1:47:36:17:19:37:97.3%:99:2.1762E-20:33:1:0:1:37 1/1:47:28:14:14:29:96.55%:99:9.9776E-16:33:1:0:1:29 1/1:43:32:13:19:32:96.97%:99:4.7095E-18:37:1:0:1:33 1/1:45:35:17:18:36:97.22%:99:8.3613E-20:34:1:1:0:36 1/1:46:27:16:11:30:90%:99:4.6134E-14:36:3:1:2:30 1/1:44:32:10:22:34:94.12%:99:2.2142E-17:48:2:1:1:34 0/1:45:32:17:15:36:88.89%:99:2.0653E-16:35:4:2:2:36 1/1:40:35:22:13:37:92.11%:99:1.5466E-18:29:3:1:2:38 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 0/1:45:24:12:12:27:88.89%:99:2.0853E-12:32:3:2:1:27 1/1:45:33:12:21:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:13:24:38:94.87%:99:3.0128E-20:46:2:1:1:39 1/1:47:45:18:27:46:97.83%:99:1.1441E-25:33:1:1:0:46 1/1:47:37:19:18:38:97.37%:99:5.6582E-21:37:1:1:0:38 1/1:42:33:20:13:34:97.06%:99:1.2301E-18:37:1:0:1:34 1/1:39:26:14:12:28:92.86%:99:5.6872E-14:37:2:1:1:28 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:17:12:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:20:16:36:94.74%:99:1.1316E-19:33:2:2:0:38 1/1:38:39:19:20:39:92.86%:99:8.4519E-21:37:3:1:2:42 0/1:44:33:14:19:36:89.19%:99:5.7997E-17:36:4:3:1:37 0/1:46:33:16:17:38:86.84%:99:1.3966E-16:34:5:4:1:38 1/1:43:19:8:11:21:90.48%:93:4.7003E-10:30:2:1:1:21 1/1:42:53:26:27:57:91.38%:99:1.1445E-27:39:5:2:3:58 1/1:43:54:28:26:56:96.43%:99:4.2321E-30:35:2:0:2:56 1/1:45:29:10:19:30:96.67%:99:2.6212E-16:33:1:1:0:30 1/1:42:32:19:13:31:94.12%:99:2.2142E-17:35:2:2:0:34 1/1:44:45:20:25:48:93.75%:99:3.2362E-24:37:3:0:3:48 1/1:40:34:13:21:31:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:58:29:29:55:98.31%:99:2.4634E-33:37:1:1:0:59 1/1:39:43:19:24:39:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:54:19:35:55:96.43%:99:4.2321E-30:37:2:1:1:56 1/1:41:32:9:23:33:91.43%:99:7.5196E-17:37:3:2:1:36 1/1:45:51:30:21:52:98.08%:99:3.3479E-29:32:1:0:1:52 1/1:43:38:14:24:40:92.68%:99:3.1178E-20:36:3:2:1:41 1/1:41:45:20:25:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:38:21:17:38:92.68%:99:3.1178E-20:34:3:2:1:41 1/1:41:44:19:25:44:97.78%:99:4.4304E-25:37:1:1:0:45 1/1:42:38:19:19:37:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:41:39:28:11:42:92.86%:99:8.4519E-21:32:3:2:1:42 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:35:16:19:38:92.11%:99:1.5466E-18:45:3:2:1:38 1/1:41:43:25:18:46:91.49%:99:1.5372E-22:35:4:4:0:47 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:24:13:11:24:96%:99:2.0568E-13:37:1:0:1:25 1/1:42:32:16:16:34:94.12%:99:2.2142E-17:46:2:2:0:34 1/1:46:37:18:19:38:94.87%:99:3.0128E-20:37:2:1:1:40 1/1:43:40:13:27:41:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:32:18:14:35:91.43%:99:7.5196E-17:33:3:1:2:35 1/1:43:54:29:25:54:98.18%:99:5.6837E-31:36:1:0:1:55 1/1:46:54:21:33:58:93.1%:99:9.0836E-29:34:4:3:1:58 0/1:45:33:12:21:36:89.19%:99:5.7997E-17:35:4:3:1:37 MTB_anc 612555 . T A . PASS AC=300;AF=1.00;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.612555T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.612555T>A||||||,A|intergenic_region|MODIFIER|Rv0519c_Rv0519c-gabP_Rv0522|gene535-gene536|intergenic_region|gene535-gene536|||n.612555T>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:52:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:56:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:21:9:12:22:95.45%:99:1.0931E-11:38:1:0:1:22 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:32:20:12:33:96.97%:99:4.7095E-18:39:1:0:1:35 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:52:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:17:7:10:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:53:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:54:26:16:10:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:52:25:27:53:98.11%:99:6.3169E-31:0:0:0:0:54 1/1:43:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 614839 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|hemL_Rv0524|gene538|transcript|Transcript_gene538|Coding|1/1|c.5G>A|p.Gly2Asp|5/1389|5/1389|2/462||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.614839G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.614839G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:53:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:53:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:59:37:22:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:54:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:53:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:40:23:17:41:97.56%:99:9.8874E-23:39:1:1:0:41 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:60:34:26:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:16:12:29:96.55%:99:9.9776E-16:39:1:1:0:32 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:71:35:36:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 621379 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv0530_Rv0530|gene544|transcript|Transcript_gene544|Coding|1/1|c.473T>G|p.Leu158Trp|473/1218|473/1218|158/405||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.621379T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.621379T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:43:56:28:28:56 0/0:0:0:0:0:13:0%:25:1E0:51:13:5:8:13 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:22 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:35:0%:67:1E0:48:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:10:21:32 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:14:0%:25:1E0:46:14:7:7:14 0/0:0:0:0:0:55:0%:99:1E0:47:55:26:29:55 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:29 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:36 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:31:0%:59:1E0:48:31:20:11:31 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:18 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:24 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:37:0%:70:1E0:48:37:24:13:38 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:24 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:43 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:47 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:55:0%:99:1E0:44:55:23:32:55 0/0:0:0:0:0:55:0%:99:1E0:47:55:27:28:55 0/0:0:0:0:0:45:0%:85:1E0:45:45:27:18:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:18 0/0:0:0:0:0:18:0%:32:1E0:43:18:5:13:18 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:45 0/0:32:1:0:1:61:1.64%:99:5E-1:47:60:30:30:61 0/0:0:0:0:0:36:0%:66:1E0:48:36:21:15:36 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:24:0%:44:1E0:49:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:50 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:38 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:47:0%:89:1E0:42:47:18:29:47 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:49:32:13:19:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:51 0/0:0:0:0:0:26:0%:47:1E0:48:26:9:17:26 0/0:0:0:0:0:22:0%:40:1E0:48:22:6:16:22 0/0:0:0:0:0:48:0%:89:1E0:47:48:19:29:48 0/0:0:0:0:0:28:0%:51:1E0:51:28:13:15:28 0/0:0:0:0:0:18:0%:32:1E0:50:18:7:11:18 0/0:0:0:0:0:28:0%:51:1E0:50:28:16:12:28 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:53 0/0:0:0:0:0:31:0%:59:1E0:44:31:10:21:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:37 0/0:0:0:0:0:30:0%:55:1E0:51:30:17:13:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:43:0%:82:1E0:41:43:25:18:44 0/0:0:0:0:0:38:0%:70:1E0:38:38:17:21:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:15 0/0:0:0:0:0:31:0%:59:1E0:52:31:13:18:31 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 0/0:0:0:0:0:29:0%:55:1E0:47:29:19:10:30 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:19 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:48:0%:89:1E0:42:48:15:33:49 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:32 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:44 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:34 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:19:8:27 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:38 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:25 0/0:0:0:0:0:56:0%:99:1E0:43:56:30:26:57 0/0:0:0:0:0:57:0%:99:1E0:41:57:32:25:58 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:25:18:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:46:0%:85:1E0:38:46:28:18:48 0/0:0:0:0:0:39:0%:74:1E0:40:39:28:11:41 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:23 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:41 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:55:0%:99:1E0:39:55:26:29:56 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:47 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/1:42:35:18:17:39:89.74%:99:4.5343E-18:37:4:4:0:39 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 0/0:0:0:0:0:62:0%:99:1E0:43:62:25:37:62 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 MTB_anc 623270 . G C . PASS AC=177;AF=0.994;AN=178;ANN=C|missense_variant|MODERATE|PE_PGRS6_Rv0532|gene547|transcript|Transcript_gene547|Coding|1/1|c.478G>C|p.Val160Leu|478/1785|478/1785|160/594||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.623270G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.623270G>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:16:8:8:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:37:6:3:3:7:85.71%:29:1.0823E-3:0:0:0:0:7 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:2:5:8:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 1/1:34:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:13:7:6:14:92.86%:70:9.6148E-8:0:0:0:0:15 1/1:36:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 623273 . G A . PASS AC=182;AF=1.00;AN=182;ANN=A|missense_variant|MODERATE|PE_PGRS6_Rv0532|gene547|transcript|Transcript_gene547|Coding|1/1|c.481G>A|p.Val161Ile|481/1785|481/1785|161/594||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.623273G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.623273G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:2:5:8:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 623464 . G C . PASS AC=236;AF=1.00;AN=236;ANN=C|synonymous_variant|LOW|PE_PGRS6_Rv0532|gene547|transcript|Transcript_gene547|Coding|1/1|c.672G>C|p.Gly224Gly|672/1785|672/1785|224/594||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.623464G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.623464G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:42:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:11 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:20 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:10:7:3:11:90.91%:52:5.4125E-6:0:0:0:0:12 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:19 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:32:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:31:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:34:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 MTB_anc 623559 . ACGG A . PASS AC=2;AF=7.576e-03;AN=264;ANN=A|disruptive_inframe_deletion|MODERATE|PE_PGRS6_Rv0532|gene547|transcript|Transcript_gene547|Coding|1/1|c.773_775delGCG|p.Gly258del|773/1785|773/1785|258/594||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.623560_623562delCGG||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.623560_623562delCGG||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:10:0%:17:1E0:39:10:5:5:10 0/0:0:0:0:0:10:0%:17:1E0:46:10:7:3:10 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:29 0/0:0:0:0:0:13:0%:25:1E0:37:13:11:2:16 0/0:0:0:0:0:15:0%:29:1E0:37:15:12:3:16 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:15 0/0:0:0:0:0:13:0%:25:1E0:41:13:9:4:17 0/0:0:0:0:0:7:0%:14:1E0:43:7:4:3:10 0/0:0:0:0:0:19:0%:37:1E0:42:19:14:5:21 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:17 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:16 0/0:0:0:0:0:14:0%:25:1E0:39:13:8:5:16 0/0:0:0:0:0:8:0%:14:1E0:44:8:3:5:9 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:12 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:13 0/0:0:0:0:0:13:0%:25:1E0:38:13:10:3:14 0/0:0:0:0:0:14:0%:25:1E0:39:14:10:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:39:11:2:9:11 0/0:0:0:0:0:7:0%:14:1E0:44:7:7:0:7 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:16 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:10 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:23 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:20 0/0:0:0:0:0:13:0%:25:1E0:40:13:10:3:14 0/0:0:0:0:0:7:0%:14:1E0:38:7:5:2:7 0/0:0:0:0:0:10:0%:17:1E0:37:10:7:3:13 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:18 0/0:0:0:0:0:10:0%:17:1E0:38:10:7:3:11 0/0:0:0:0:0:18:0%:32:1E0:35:18:11:7:18 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:8 0/0:0:0:0:0:9:0%:18:1E0:38:9:5:4:10 0/0:0:0:0:0:7:0%:14:1E0:38:7:4:3:7 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:12 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:19 0/0:0:0:0:0:12:0%:21:1E0:37:12:5:7:13 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:23 0/0:0:0:0:0:14:0%:25:1E0:39:14:12:2:14 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:14 0/0:0:0:0:0:11:0%:22:1E0:33:11:7:4:12 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:18 0/0:0:0:0:0:12:0%:21:1E0:35:12:8:4:13 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:22 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:22 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:22 0/0:0:0:0:0:14:0%:25:1E0:37:14:9:5:15 0/0:0:0:0:0:10:0%:17:1E0:35:10:7:3:10 0/0:0:0:0:0:15:0%:29:1E0:35:15:11:4:15 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:9:0%:18:1E0:39:9:5:4:9 0/0:0:0:0:0:24:0%:44:1E0:35:24:13:11:24 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:12 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:8 0/0:0:0:0:0:15:0%:29:1E0:34:15:8:7:16 0/0:0:0:0:0:9:0%:18:1E0:35:9:3:6:9 0/0:0:0:0:0:14:0%:25:1E0:40:14:11:3:14 0/0:0:0:0:0:8:0%:14:1E0:34:8:4:4:8 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:19 0/0:0:0:0:0:15:0%:29:1E0:36:15:11:4:17 0/0:0:0:0:0:17:0%:33:1E0:35:17:12:5:18 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:18 0/0:0:0:0:0:9:0%:18:1E0:38:9:5:4:9 0/0:0:0:0:0:19:0%:37:1E0:37:19:12:7:19 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:21 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:19 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:16 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:23 0/0:0:0:0:0:9:0%:18:1E0:49:9:3:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:24:1:1:0:15:6.67%:21:5E-1:37:14:8:6:15 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:21 0/0:0:0:0:0:11:0%:22:1E0:44:11:8:3:11 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:18 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:16 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:23 0/0:0:0:0:0:17:0%:29:1E0:38:16:11:5:19 0/0:0:0:0:0:17:0%:33:1E0:39:17:12:5:19 0/0:0:0:0:0:7:0%:14:1E0:43:7:4:3:9 0/0:0:0:0:0:12:0%:21:1E0:37:12:9:3:15 0/0:0:0:0:0:15:0%:29:1E0:42:15:9:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:37:13:9:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:34:14:12:2:14 0/0:0:0:0:0:13:0%:25:1E0:34:13:7:6:13 0/0:0:0:0:0:8:0%:14:1E0:40:8:4:4:10 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:18 0/0:0:0:0:0:10:0%:18:1E0:38:9:6:3:11 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:12 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:0:0:0:0:12:0%:21:1E0:36:12:9:3:14 0/0:0:0:0:0:9:0%:18:1E0:34:9:4:5:10 0/0:0:0:0:0:17:0%:33:1E0:34:17:8:9:18 0/0:0:0:0:0:14:0%:25:1E0:38:14:10:4:14 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:8 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:16 0/0:0:0:0:0:7:0%:14:1E0:33:7:3:4:8 0/0:0:0:0:0:21:0%:40:1E0:37:21:17:4:22 0/0:0:0:0:0:9:0%:18:1E0:40:9:5:4:10 0/0:0:0:0:0:23:0%:44:1E0:37:23:16:7:23 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:10 0/0:0:0:0:0:13:0%:25:1E0:34:13:10:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:34:10:6:4:12 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:14 0/0:0:0:0:0:20:0%:36:1E0:39:20:17:3:20 0/0:0:0:0:0:21:0%:40:1E0:36:21:15:6:23 0/0:0:0:0:0:17:0%:33:1E0:37:17:13:4:20 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:14 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:18 0/0:0:0:0:0:16:0%:29:1E0:36:16:14:2:16 0/0:0:0:0:0:14:0%:25:1E0:40:14:8:6:14 0/0:0:0:0:0:10:0%:17:1E0:35:10:8:2:11 0/0:0:0:0:0:12:0%:21:1E0:35:12:10:2:12 0/0:0:0:0:0:13:0%:25:1E0:34:13:9:4:15 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:34:8:6:2:9 1/1:35:12:8:4:10:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:7 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:7 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:17:0%:33:1E0:34:17:9:8:18 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:15 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:15 0/0:0:0:0:0:12:0%:21:1E0:40:12:7:5:12 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:18 0/0:0:0:0:0:16:0%:29:1E0:35:16:7:9:17 0/0:38:1:0:1:18:5.56%:24:5E-1:36:17:10:7:18 0/0:0:0:0:0:8:0%:14:1E0:36:8:5:3:9 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:12 0/0:0:0:0:0:11:0%:22:1E0:33:11:6:5:12 0/0:0:0:0:0:11:0%:22:1E0:34:11:8:3:11 0/0:0:0:0:0:12:0%:21:1E0:34:12:4:8:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:10:2:13 0/0:0:0:0:0:20:0%:36:1E0:34:20:11:9:21 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:12 MTB_anc 627968 . G A . PASS AC=68;AF=0.227;AN=300;ANN=A|missense_variant|MODERATE|galE3_Rv0536|gene551|transcript|Transcript_gene551|Coding|1/1|c.721G>A|p.Gly241Ser|721/1041|721/1041|241/346||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.627968G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.627968G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:38:42:14:28:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:33 0/0:0:0:0:0:15:0%:29:1E0:42:15:4:11:16 1/1:39:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:8:22:30 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:20 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:5:13:18 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:40 0/0:0:0:0:0:13:0%:25:1E0:43:13:6:7:13 0/0:0:0:0:0:53:0%:99:1E0:41:53:13:40:55 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:27 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:24 1/1:39:13:4:9:14:92.86%:64:3.7391E-7:38:1:1:0:15 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:23 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:20 0/0:0:0:0:0:49:0%:93:1E0:39:49:18:31:51 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:16 0/0:0:0:0:0:32:0%:59:1E0:40:32:9:23:33 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 1/1:42:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:16 1/1:48:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 1/1:38:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:10:27:38 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:24:0%:44:1E0:40:24:7:17:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:7:16:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:9:24:33 0/0:0:0:0:0:50:0%:92:1E0:43:50:13:37:51 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:34 0/0:0:0:0:0:42:0%:77:1E0:40:42:13:29:44 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:38:1:1:0:22:4.55%:31:5E-1:40:21:8:13:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:5:20:25 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:40 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:30 0/0:0:0:0:0:42:0%:77:1E0:38:42:22:20:42 0/0:0:0:0:0:47:0%:89:1E0:40:47:11:36:48 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:29 0/0:0:0:0:0:13:0%:25:1E0:47:13:5:8:13 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:21 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:28 0/0:0:0:0:0:21:0%:40:1E0:40:21:6:15:22 0/0:0:0:0:0:43:0%:82:1E0:39:43:15:28:44 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:38 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:19 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:40 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:35 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:40:0%:74:1E0:40:40:9:31:40 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:35 1/1:39:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:46:13:33:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:15:0%:29:1E0:41:15:5:10:15 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:34 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:14 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:4:25:30 0/0:0:0:0:0:46:0%:85:1E0:38:46:20:26:46 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 1/1:39:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:59 0/0:0:0:0:0:34:0%:62:1E0:40:34:10:24:36 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:19 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 0/0:0:0:0:0:42:0%:77:1E0:39:42:14:28:42 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:15:0%:29:1E0:41:15:10:5:16 0/0:0:0:0:0:40:0%:74:1E0:42:40:13:27:41 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:45:0%:85:1E0:39:45:16:29:46 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 1/1:39:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:22 0/0:0:0:0:0:24:0%:44:1E0:41:24:8:16:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:29 0/0:0:0:0:0:34:0%:62:1E0:40:34:10:24:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:20 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 0/0:0:0:0:0:40:0%:74:1E0:38:40:16:24:41 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:33 0/0:0:0:0:0:22:0%:40:1E0:39:22:6:16:23 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:23 0/0:0:0:0:0:57:0%:99:1E0:40:57:19:38:57 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:23:0%:44:1E0:43:23:5:18:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 1/1:36:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:37 0/0:0:0:0:0:30:0%:55:1E0:38:30:8:22:32 0/0:0:0:0:0:49:0%:93:1E0:38:49:17:32:50 0/0:0:0:0:0:29:0%:55:1E0:36:29:16:13:31 0/0:0:0:0:0:36:0%:66:1E0:35:36:12:24:36 0/0:0:0:0:0:37:0%:70:1E0:38:37:14:23:38 0/0:0:0:0:0:37:0%:70:1E0:38:37:11:26:37 0/0:0:0:0:0:31:0%:59:1E0:37:31:11:20:34 1/1:37:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:37 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:35 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:27:8:19:28:96.43%:99:3.7915E-15:38:1:1:0:29 0/0:0:0:0:0:51:0%:97:1E0:37:51:19:32:52 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:26 1/1:38:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:26:0%:47:1E0:36:26:9:17:26 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:39:0%:74:1E0:38:39:13:26:41 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:30 0/0:0:0:0:0:12:0%:21:1E0:39:12:3:9:12 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:40:0%:74:1E0:37:40:20:20:42 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:32 MTB_anc 628895 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0537c_Rv0537c|gene552|transcript|Transcript_gene552|Coding|1/1|c.837C>T|p.Phe279Phe|837/1434|837/1434|279/477||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.628895G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.628895G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:51:29:22:52:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:52:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:51:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:44:29:15:45:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:40:21:19:41:97.56%:99:9.8874E-23:60:1:0:1:41 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:53:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:42:26:16:43:97.67%:99:6.6289E-24:39:1:0:1:43 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:54:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:49:17:32:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:31:17:14:32:96.88%:99:1.8007E-17:39:1:1:0:32 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 629223 . G A . PASS AC=3;AF=0.010;AN=300;ANN=A|missense_variant|MODERATE|Rv0537c_Rv0537c|gene552|transcript|Transcript_gene552|Coding|1/1|c.509C>T|p.Ala170Val|509/1434|509/1434|170/477||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.629223G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.629223G>A||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:33:0%:63:1E0:38:33:12:21:34 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:14 0/1:45:24:12:12:48:50%:89:1.2355E-9:41:24:14:10:50 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:19:0%:37:1E0:40:19:12:7:21 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:41 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:24:9:33 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:38:1:1:0:22:4.55%:31:5E-1:43:21:13:8:22 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:46 0/0:0:0:0:0:13:0%:25:1E0:38:13:8:5:13 0/0:0:0:0:0:55:0%:99:1E0:40:55:32:23:56 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:37 0/0:0:0:0:0:18:0%:32:1E0:39:18:10:8:18 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:32 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:26 0/0:0:0:0:0:14:0%:25:1E0:42:14:7:7:15 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:38 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:19 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:30 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:31 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:27 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:21:0%:40:1E0:39:21:13:8:24 0/0:0:0:0:0:56:0%:99:1E0:43:56:31:25:57 0/0:0:0:0:0:44:0%:81:1E0:41:44:17:27:45 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:40 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:30 0/0:0:0:0:0:25:0%:48:1E0:37:25:7:18:25 0/0:0:0:0:0:40:0%:74:1E0:37:40:11:29:42 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:41 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:46 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:22 0/0:0:0:0:0:45:0%:85:1E0:38:45:25:20:49 0/0:0:0:0:0:13:0%:25:1E0:42:13:6:7:14 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:29 0/0:0:0:0:0:50:0%:92:1E0:38:50:26:24:51 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:37 0/0:37:1:1:0:28:3.57%:41:5E-1:38:27:11:16:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:38 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:30 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:40 0/0:0:0:0:0:43:0%:82:1E0:38:43:20:23:48 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:27 0/0:0:0:0:0:69:0%:99:1E0:42:69:31:38:70 0/0:0:0:0:0:30:0%:55:1E0:37:30:16:14:32 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:42 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:23 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:20 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:13:0%:25:1E0:41:13:7:6:13 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:37 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:46 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:21 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:34 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:19 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:39 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:43 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:27 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:18 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:32 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:40 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:24 0/0:0:0:0:0:48:0%:89:1E0:41:48:19:29:49 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:23 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:33 0/0:0:0:0:0:37:0%:70:1E0:37:37:14:23:37 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:43 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:40 0/0:0:0:0:0:23:0%:44:1E0:35:23:13:10:25 0/0:0:0:0:0:23:0%:44:1E0:36:23:7:16:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:35 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:37:34:17:17:35 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:21 0/0:0:0:0:0:23:0%:44:1E0:37:23:14:9:24 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:33 0/0:0:0:0:0:33:0%:63:1E0:35:33:17:16:34 0/0:60:1:1:0:36:2.78%:55:5E-1:42:35:20:15:36 0/0:0:0:0:0:28:0%:51:1E0:37:28:19:9:29 0/0:0:0:0:0:32:0%:59:1E0:37:32:16:16:37 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:17 0/0:0:0:0:0:50:0%:92:1E0:37:50:23:27:52 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:42 0/0:0:0:0:0:27:0%:52:1E0:35:27:11:16:29 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:22 0/0:0:0:0:0:35:0%:67:1E0:35:35:17:18:38 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:25 0/0:0:0:0:0:40:0%:74:1E0:38:40:22:18:43 0/0:0:0:0:0:25:0%:48:1E0:34:25:14:11:26 0/0:0:0:0:0:30:0%:55:1E0:36:30:16:14:31 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:36 0/0:0:0:0:0:33:0%:63:1E0:37:33:22:11:35 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:23 0/0:0:0:0:0:38:0%:70:1E0:37:38:22:16:40 0/0:0:0:0:0:31:0%:59:1E0:37:31:17:14:33 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:30 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:25 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:25 0/0:0:0:0:0:41:0%:78:1E0:37:41:32:9:42 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:38 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:28 0/0:0:0:0:0:45:0%:85:1E0:37:45:26:19:47 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:27 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:23 0/0:60:1:1:0:30:3.33%:44:5E-1:38:29:9:20:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:39 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:43 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:19 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:14:30:46 0/0:0:0:0:0:55:0%:99:1E0:37:55:28:27:59 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:35 MTB_anc 632033 . G A . PASS AC=2;AF=6.711e-03;AN=298;ANN=A|synonymous_variant|LOW|Rv0539_Rv0539|gene554|transcript|Transcript_gene554|Coding|1/1|c.291G>A|p.Leu97Leu|291/633|291/633|97/210||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.632033G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.632033G>A||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:35:0%:67:1E0:37:35:14:21:35 0/0:0:0:0:0:7:0%:14:1E0:43:7:2:5:7 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:11:0%:22:1E0:39:11:4:7:13 0/0:0:0:0:0:13:0%:25:1E0:41:13:7:6:14 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:21 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:16 0/0:0:0:0:0:14:0%:25:1E0:40:14:6:8:14 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:15 0/0:0:0:0:0:11:0%:22:1E0:44:11:7:4:11 0/0:0:0:0:0:30:0%:55:1E0:37:30:8:22:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:11:0%:22:1E0:38:11:4:7:12 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:10 0/0:0:0:0:0:14:0%:25:1E0:41:14:9:5:14 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:19 0/0:0:0:0:0:21:0%:40:1E0:37:21:16:5:23 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:28 0/0:0:0:0:0:11:0%:22:1E0:38:11:7:4:11 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:38:28:7:21:29 0/0:0:0:0:0:14:0%:25:1E0:43:14:5:9:14 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:13 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:29 0/0:36:1:0:1:23:4.35%:34:5E-1:38:22:11:11:24 0/0:60:1:1:0:39:2.56%:62:5E-1:38:38:20:18:39 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:18 0/0:0:0:0:0:18:0%:32:1E0:39:18:15:3:18 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:28 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:41 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:33 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:18:0%:33:1E0:37:17:9:8:18 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:14 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:30 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:36:1:0:1:24:4.17%:34:5E-1:38:23:9:14:25 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:27 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:24 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:27 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:10 0/0:0:0:0:0:35:0%:67:1E0:37:35:14:21:37 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:16 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:15 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:30 0/0:0:0:0:0:13:0%:25:1E0:37:13:9:4:13 0/0:0:0:0:0:36:0%:66:1E0:38:36:14:22:38 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:26 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:26 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:21 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:26 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:36 0/0:0:0:0:0:10:0%:17:1E0:40:10:4:6:11 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:14:0%:25:1E0:38:14:4:10:15 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:8:0%:14:1E0:37:8:5:3:9 0/0:0:0:0:0:16:0%:29:1E0:42:16:5:11:17 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:24 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:33 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:17 0/0:37:1:0:1:30:3.33%:44:5E-1:37:29:17:12:31 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:18 0/0:0:0:0:0:21:0%:40:1E0:37:21:13:8:21 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:27:0%:52:1E0:37:27:17:10:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:17 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:29 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:22 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:14 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:10 0/0:0:0:0:0:21:0%:40:1E0:39:21:13:8:23 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:16 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:29 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:19 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:22 1/1:36:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:22 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:20 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:18 0/0:0:0:0:0:11:0%:22:1E0:38:11:4:7:12 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:28 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:19 0/0:0:0:0:0:24:0%:44:1E0:37:24:7:17:24 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:26 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:16 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:30 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:17 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:19 0/0:0:0:0:0:30:0%:55:1E0:37:30:16:14:30 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:21:0%:40:1E0:37:21:13:8:24 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:15 0/0:35:1:0:1:26:3.85%:38:5E-1:37:25:9:16:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:30 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:17 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:19 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:25 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:21 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:26 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:22 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:21 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:22 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:17 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:25 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:18 0/0:0:0:0:0:19:0%:37:1E0:37:19:14:5:20 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:33 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:17 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:34 0/0:0:0:0:0:33:0%:63:1E0:37:33:17:16:33 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:16 0/0:0:0:0:0:13:0%:25:1E0:37:13:7:6:13 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:15:13:29 0/0:0:0:0:0:27:0%:52:1E0:38:27:7:20:27 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:16 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:18 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:24 0/0:0:0:0:0:16:0%:29:1E0:37:16:11:5:17 MTB_anc 643703 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv0552_Rv0552|gene567|transcript|Transcript_gene567|Coding|1/1|c.815T>C|p.Leu272Pro|815/1605|815/1605|272/534||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.643703T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.643703T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:38 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:44:0%:81:1E0:43:44:13:31:44 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:6:15:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:32:0%:59:1E0:48:32:12:20:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:44:0%:81:1E0:48:44:23:21:45 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:18:0%:32:1E0:48:18:7:11:19 0/0:0:0:0:0:56:0%:99:1E0:42:56:30:26:56 0/0:0:0:0:0:31:0%:59:1E0:40:31:7:24:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:22 0/0:0:0:0:0:11:0%:22:1E0:47:11:1:10:13 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:49:0%:93:1E0:39:49:17:32:50 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:37 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:37 0/0:37:1:1:0:31:3.23%:48:5E-1:39:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:66:0%:99:1E0:46:66:35:31:66 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:45 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:37 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:48:0%:89:1E0:43:48:29:19:48 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:34 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:18 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:47 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:45 0/0:0:0:0:0:41:0%:78:1E0:47:41:23:18:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:45 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:48 0/0:0:0:0:0:24:0%:44:1E0:47:24:6:18:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:68:0%:99:1E0:44:68:31:37:68 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:27 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:11:0%:22:1E0:47:11:4:7:12 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:15:0%:29:1E0:42:15:5:10:15 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:38 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:17:5:22 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:42 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:48:0%:89:1E0:42:48:30:18:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:14:23:39 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:13:26:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:22 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:37 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:46 0/0:0:0:0:0:23:0%:44:1E0:41:23:7:16:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:33:0%:63:1E0:37:33:17:16:36 0/0:0:0:0:0:64:0%:99:1E0:40:64:23:41:64 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:56 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:19 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:37 0/0:0:0:0:0:46:0%:85:1E0:38:46:21:25:46 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:42 0/0:0:0:0:0:39:0%:74:1E0:39:39:17:22:42 0/0:0:0:0:0:42:0%:77:1E0:38:42:24:18:42 0/0:0:0:0:0:38:0%:70:1E0:38:38:16:22:39 0/0:0:0:0:0:40:0%:74:1E0:38:40:17:23:42 0/0:0:0:0:0:33:0%:63:1E0:37:33:12:21:34 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:45 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:35 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:37:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:42 0/0:0:0:0:0:59:0%:99:1E0:41:59:26:33:60 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 MTB_anc 648856 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|mgtA_Rv0557|gene572|transcript|Transcript_gene572|Coding|1/1|c.321C>T|p.Gly107Gly|321/1137|321/1137|107/378||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.648856C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.648856C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:63 1/1:48:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:22:13:9:23:95.65%:99:2.9149E-12:35:1:0:1:24 1/1:52:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:59:27:32:60:98.33%:99:4.1056E-35:0:0:0:0:61 1/1:44:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:54:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:49:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:17:21:39:97.44%:99:1.4697E-21:38:1:1:0:40 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:61:29:32:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:43:19:24:44:97.73%:99:1.7144E-24:38:1:1:0:46 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:39:17:22:40:97.5%:99:3.8137E-22:25:1:1:0:42 1/1:45:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:51:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:52:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:31:6:25:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:38:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 655986 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|gpdA1_Rv0564c-Rv0565c_Rv0565c|gene579-gene580|intergenic_region|gene579-gene580|||n.655986G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:54:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:54:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:51:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:51:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:49:18:31:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:52:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:52:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:63:36:27:63:100%:99:1.657E-37:0:0:0:0:66 1/1:42:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:68:32:36:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:49:21:28:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:63:37:26:63:100%:99:1.657E-37:0:0:0:0:64 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 657269 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0565c_Rv0565c|gene580|transcript|Transcript_gene580|Coding|1/1|c.202T>C|p.Ser68Pro|202/1461|202/1461|68/486||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.657269A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|ethionamide_prothionamide|||n.657269A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.657269A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:51:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:52 1/1:45:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:32:15:17:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:46:22:24:47:97.87%:99:2.9526E-26:60:1:1:0:47 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:39:9:30:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:49:15:34:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:52:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:54:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:49 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 657578 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0566c_Rv0566c|gene581|transcript|Transcript_gene581|Coding|1/1|c.462C>T|p.Asp154Asp|462/492|462/492|154/163||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.657578G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.657578G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:49:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:49:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:53:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:51:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:50:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:28:18:10:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:52:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:60:28:32:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:60:30:30:60:100%:99:1.035E-35:0:0:0:0:61 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 MTB_anc 659341 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0567_Rv0567-cyp135B1_Rv0568|gene583-gene584|intergenic_region|gene583-gene584|||n.659341C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:39:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:36:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:37:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:44:12:32:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:37:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:36:9:27:37:100%:99:2.2598E-21:0:0:0:0:40 1/1:37:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:36:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:48:14:34:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:34:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 662241 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|nrdZ_Rv0570|gene586|transcript|Transcript_gene586|Coding|1/1|c.947G>C|p.Gly316Ala|947/2079|947/2079|316/692||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.662241G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.662241G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:40:41:27:14:41 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:47 0/0:37:1:0:1:33:3.03%:52:5E-1:45:32:15:17:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:41:0%:78:1E0:49:41:16:25:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:22:0%:40:1E0:52:22:10:12:23 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:47 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:30 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:50 0/0:0:0:0:0:31:0%:59:1E0:45:31:22:9:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:28:0%:51:1E0:47:28:19:9:28 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:20 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:46:0%:85:1E0:48:46:20:26:47 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:66:0%:99:1E0:47:66:32:34:66 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:48 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:35 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:29 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:23 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:44 0/0:0:0:0:0:43:0%:82:1E0:40:43:26:17:43 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:45 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:60:1:1:0:53:1.89%:88:5E-1:41:52:25:27:53 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:19:8:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:51 0/0:0:0:0:0:51:0%:97:1E0:44:51:31:20:51 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:28 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 0/0:0:0:0:0:37:0%:70:1E0:40:37:13:24:37 0/0:60:1:1:0:36:2.78%:55:5E-1:43:35:18:17:36 0/0:0:0:0:0:41:0%:78:1E0:49:41:19:22:44 0/0:38:1:0:1:54:1.85%:87:5E-1:45:53:29:24:54 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:0:0:0:0:42:0%:77:1E0:43:42:28:14:43 0/0:0:0:0:0:19:0%:37:1E0:50:19:12:7:19 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:38:1:1:0:41:2.44%:66:5E-1:49:40:20:20:42 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:41 0/0:0:0:0:0:20:0%:36:1E0:49:20:6:14:20 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:36 0/0:0:0:0:0:52:0%:96:1E0:40:52:26:26:52 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:35 0/0:0:0:0:0:55:0%:99:1E0:39:55:34:21:56 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:38 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 0/0:0:0:0:0:39:0%:74:1E0:38:39:19:20:41 0/0:0:0:0:0:27:0%:52:1E0:43:27:19:8:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:32 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:25 0/0:0:0:0:0:39:0%:74:1E0:49:39:13:26:39 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:50 0/0:0:0:0:0:31:0%:55:1E0:43:30:13:17:32 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:49 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:37 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:24 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:30 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:18 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:22:8:31 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:42 0/0:0:0:0:0:25:0%:48:1E0:39:25:18:7:26 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:39 0/0:0:0:0:0:36:0%:66:1E0:39:36:25:11:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:17:0%:33:1E0:39:17:10:7:18 0/0:0:0:0:0:59:0%:99:1E0:38:59:26:33:62 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:31 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:42 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:44 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:32:0%:59:1E0:36:32:22:10:34 0/0:0:0:0:0:43:0%:82:1E0:39:43:30:13:46 0/0:0:0:0:0:51:0%:97:1E0:39:51:23:28:51 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:41 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:24 0/0:0:0:0:0:40:0%:74:1E0:37:40:24:16:43 0/0:0:0:0:0:40:0%:74:1E0:37:40:24:16:41 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:37 0/0:0:0:0:0:35:0%:67:1E0:37:35:24:11:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:38 0/0:0:0:0:0:54:0%:99:1E0:41:54:20:34:55 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:32 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:43 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:39 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:48:0%:89:1E0:43:48:29:19:50 0/0:0:0:0:0:48:0%:89:1E0:40:48:27:21:52 0/0:0:0:0:0:27:0%:52:1E0:37:27:16:11:27 MTB_anc 662911 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|nrdZ_Rv0570|gene586|transcript|Transcript_gene586|Coding|1/1|c.1617C>T|p.Ala539Ala|1617/2079|1617/2079|539/692||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.662911C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.662911C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:52:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:52:26:26:53:98.11%:99:6.3169E-31:0:0:0:0:54 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:53:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 663558 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|synonymous_variant|LOW|Rv0571c_Rv0571c|gene587|transcript|Transcript_gene587|Coding|1/1|c.1261C>T|p.Leu421Leu|1261/1332|1261/1332|421/443||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.663558G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.663558G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:24:25:49 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:60:1:1:0:20:5%:27:5E-1:49:19:6:13:20 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:0:0:0:0:18:0%:32:1E0:47:18:7:11:18 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:49 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:11:0%:22:1E0:43:11:6:5:11 0/0:0:0:0:0:18:0%:32:1E0:42:18:5:13:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:49:0%:93:1E0:41:49:20:29:51 0/0:30:1:0:1:28:3.57%:41:5E-1:46:27:13:14:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:19 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:9:21:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:28:0%:51:1E0:45:28:8:20:28 0/0:0:0:0:0:36:0%:66:1E0:38:36:12:24:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:13:27:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:54:0%:99:1E0:43:54:29:25:54 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:47 0/0:0:0:0:0:47:0%:89:1E0:45:47:19:28:48 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:41:0%:78:1E0:40:41:14:27:41 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:39 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:41 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:37:0%:70:1E0:40:37:13:24:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:62:0%:99:1E0:42:62:28:34:62 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:49:0%:93:1E0:41:49:20:29:49 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:51 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:15:0%:29:1E0:40:15:7:8:16 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:24:0%:44:1E0:49:24:8:16:24 0/0:39:1:1:0:11:9.09%:14:5E-1:51:10:7:3:11 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:38:1:1:0:20:5%:27:5E-1:43:19:7:12:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:36 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:42 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:9:20:29 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:38:1:0:1:26:3.85%:38:5E-1:45:25:11:14:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:24 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:60:0%:99:1E0:39:60:27:33:62 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:16 0/0:0:0:0:0:44:0%:81:1E0:43:44:16:28:45 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:60:1:1:0:30:3.33%:44:5E-1:41:29:13:16:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:24 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:38 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:0:0:0:0:35:0%:67:1E0:37:35:11:24:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:34 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:44 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:41 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 0/0:0:0:0:0:60:0%:99:1E0:41:60:26:34:62 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:30 0/0:0:0:0:0:45:0%:85:1E0:39:45:19:26:45 0/0:0:0:0:0:33:0%:63:1E0:41:33:11:22:34 0/0:0:0:0:0:48:0%:89:1E0:39:48:19:29:49 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:14:27:42 0/0:0:0:0:0:43:0%:82:1E0:42:43:14:29:44 0/0:0:0:0:0:43:0%:82:1E0:38:43:17:26:43 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 0/0:0:0:0:0:36:0%:66:1E0:39:36:24:12:39 0/0:0:0:0:0:39:0%:74:1E0:39:39:17:22:40 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:41 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:50:0%:92:1E0:39:50:22:28:50 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:11:25:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:17:29:46 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:42 MTB_anc 670545 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0576_Rv0576|gene592|transcript|Transcript_gene592|Coding|1/1|c.698A>G|p.His233Arg|698/1305|698/1305|233/434||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.670545A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.670545A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:55:30:25:56:98.21%:99:1.0149E-32:0:0:0:0:58 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:26:12:14:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:44:23:21:45:97.78%:99:4.4304E-25:30:1:0:1:47 1/1:42:54:22:32:55:98.18%:99:4.0229E-32:0:0:0:0:58 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:55 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:48:30:18:48:100%:99:1.554E-28:0:0:0:0:52 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:46 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:27:10:17:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:36:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:30:16:14:31:96.77%:99:6.8754E-17:39:1:0:1:32 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:37:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:35:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:35:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:36:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:53 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 MTB_anc 671502 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|TB27.3_Rv0577|gene593|transcript|Transcript_gene593|Coding|1/1|c.337A>C|p.Met113Leu|337/786|337/786|113/261||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.671502A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.671502A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:43:52:33:19:55 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:19 0/0:0:0:0:0:53:0%:99:1E0:45:53:29:24:55 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:21:12:37 0/0:0:0:0:0:30:0%:55:1E0:50:30:16:14:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:25 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:41 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:47 0/0:0:0:0:0:16:0%:29:1E0:46:16:11:5:16 0/0:0:0:0:0:53:0%:99:1E0:42:53:32:21:55 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:32 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:24 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:22 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:46 0/0:0:0:0:0:37:0%:70:1E0:48:37:22:15:38 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:14:0%:25:1E0:50:14:10:4:15 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:28 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:20 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:47 0/0:0:0:0:0:59:0%:99:1E0:47:59:30:29:62 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:34 0/0:0:0:0:0:48:0%:89:1E0:40:48:28:20:48 0/0:0:0:0:0:31:0%:59:1E0:37:31:19:12:33 0/0:38:1:0:1:47:2.13%:77:5E-1:43:46:25:21:48 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:49:0%:93:1E0:40:49:26:23:51 0/0:0:0:0:0:41:0%:78:1E0:43:41:27:14:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:42 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:28 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:18 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:57:0%:99:1E0:42:57:29:28:59 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:18:0%:32:1E0:47:18:12:6:19 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:47 0/0:0:0:0:0:49:0%:93:1E0:47:49:28:21:52 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:45 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:41 0/0:0:0:0:0:48:0%:89:1E0:39:48:28:20:49 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:18:0%:32:1E0:50:18:10:8:18 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:15 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:34:0%:62:1E0:54:34:17:17:35 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:32 0/0:0:0:0:0:38:0%:70:1E0:49:38:19:19:39 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:48 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:29:0%:55:1E0:50:29:16:13:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:48:0%:89:1E0:39:48:29:19:53 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:39:0%:74:1E0:49:39:20:19:39 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:40 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:28 0/0:0:0:0:0:18:0%:32:1E0:48:18:12:6:19 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:45:0%:85:1E0:41:45:29:16:45 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:48 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:41 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:45 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:30 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:23 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:42 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:23 0/0:0:0:0:0:40:0%:74:1E0:46:40:26:14:40 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:9:21:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:46 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:49:0%:93:1E0:41:49:21:28:50 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:30 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:38 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:54:0%:99:1E0:42:54:33:21:57 0/0:0:0:0:0:37:0%:70:1E0:36:37:15:22:41 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:43 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:41 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:43 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:43 0/0:0:0:0:0:34:0%:62:1E0:41:34:11:23:40 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:33 0/0:0:0:0:0:36:0%:66:1E0:37:36:18:18:36 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:30 0/0:0:0:0:0:44:0%:81:1E0:39:44:24:20:44 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:46 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:33 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:44 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:38 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:40 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:38:0%:70:1E0:40:38:25:13:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:50 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:33 MTB_anc 672330 . C T . PASS AC=294;AF=1.00;AN=294;ANN=T|missense_variant|MODERATE|PE_PGRS7_Rv0578c|gene594|transcript|Transcript_gene594|Coding|1/1|c.3587G>A|p.Gly1196Asp|3587/3921|3587/3921|1196/1306||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.672330C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.672330C>T||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:39:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:34:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:45:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:23:12:11:24:95.83%:99:7.7525E-13:37:1:1:0:27 1/1:38:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:24:19:5:24:100%:99:3.101E-14:0:0:0:0:28 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:40:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:36:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:34:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:33:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:32:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:33:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:31:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:14 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:16:16:0:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:35:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:35:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 MTB_anc 672332 . C A . PASS AC=294;AF=1.00;AN=294;ANN=A|synonymous_variant|LOW|PE_PGRS7_Rv0578c|gene594|transcript|Transcript_gene594|Coding|1/1|c.3585G>T|p.Gly1195Gly|3585/3921|3585/3921|1195/1306||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.672332C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.672332C>A||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:35:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:22:14:8:23:95.65%:99:2.9149E-12:26:1:0:1:25 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:33:11:7:4:12:91.67%:53:4.8074E-6:34:1:0:1:12 1/1:35:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:28 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:13:9:4:14:92.86%:64:3.7391E-7:28:1:0:1:15 1/1:39:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:12:5:7:12:100%:64:3.698E-7:0:0:0:0:15 1/1:36:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:20 1/1:35:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:26 1/1:36:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:33:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:34:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:31:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:14 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 MTB_anc 673726 . CG C . PASS AC=1;AF=3.401e-03;AN=294;ANN=C|frameshift_variant|HIGH|PE_PGRS7_Rv0578c|gene594|transcript|Transcript_gene594|Coding|1/1|c.2190delC|p.Gly731fs|2190/3921|2190/3921|730/1306||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.673727delG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.673727delG||||||;HOM=0;LOF=(PE_PGRS7_Rv0578c|gene594|1|1.00);set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:29:0%:55:1E0:35:29:19:10:30 0/0:0:0:0:0:8:0%:14:1E0:40:8:6:2:8 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:27 0/0:0:0:0:0:10:0%:17:1E0:43:10:7:3:10 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:18 0/0:0:0:0:0:10:0%:17:1E0:38:10:9:1:11 0/0:0:0:0:0:12:0%:21:1E0:42:12:9:3:12 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:12 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:21 0/0:0:0:0:0:11:0%:22:1E0:39:11:7:4:11 0/0:0:0:0:0:8:0%:14:1E0:35:8:5:3:8 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:28 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:12 0/0:0:0:0:0:26:0%:47:1E0:35:26:12:14:27 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:20 0/0:0:0:0:0:10:0%:17:1E0:39:10:8:2:10 0/0:0:0:0:0:11:0%:22:1E0:38:11:9:2:11 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:16 0/0:0:0:0:0:9:0%:18:1E0:37:9:6:3:9 0/0:0:0:0:0:12:0%:21:1E0:35:12:10:2:12 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:9 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:23:0%:44:1E0:38:23:17:6:23 0/0:0:0:0:0:20:0%:36:1E0:37:20:16:4:20 0/0:0:0:0:0:18:0%:32:1E0:40:18:13:5:18 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:17 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:17 0/0:0:0:0:0:18:0%:32:1E0:39:18:13:5:18 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:22 0/0:0:0:0:0:15:0%:29:1E0:38:15:11:4:15 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:15 0/0:0:0:0:0:11:0%:22:1E0:36:11:9:2:11 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:11 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:15 0/0:0:0:0:0:23:0%:44:1E0:41:23:17:6:24 0/0:0:0:0:0:17:0%:33:1E0:40:17:11:6:17 0/0:0:0:0:0:24:0%:44:1E0:36:24:14:10:26 0/0:38:1:0:1:19:5.26%:28:5E-1:39:18:14:4:19 0/0:0:0:0:0:23:0%:44:1E0:38:23:18:5:24 0/0:0:0:0:0:12:0%:21:1E0:41:12:8:4:14 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:21 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:9 0/0:0:0:0:0:11:0%:22:1E0:38:11:7:4:12 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:20 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:23 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:18 0/0:0:0:0:0:18:0%:32:1E0:37:18:14:4:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:26:0%:47:1E0:37:26:19:7:26 0/0:0:0:0:0:9:0%:18:1E0:37:9:7:2:10 0/0:0:0:0:0:10:0%:17:1E0:36:10:8:2:10 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:16 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:27 0/0:37:1:1:0:21:4.76%:31:5E-1:36:20:17:3:22 0/0:0:0:0:0:12:0%:21:1E0:41:12:9:3:13 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:26 0/0:0:0:0:0:18:0%:32:1E0:39:18:13:5:18 0/0:0:0:0:0:9:0%:18:1E0:39:9:6:3:9 0/0:0:0:0:0:10:0%:17:1E0:39:10:8:2:12 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:12 0/0:0:0:0:0:10:0%:17:1E0:36:10:9:1:11 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:16 0/1:36:21:16:5:24:87.5%:99:9.0704E-11:31:3:3:0:24 0/0:0:0:0:0:7:0%:14:1E0:36:7:7:0:9 0/0:0:0:0:0:17:0%:33:1E0:38:17:14:3:17 0/0:0:0:0:0:16:0%:29:1E0:36:16:13:3:16 0/0:0:0:0:0:9:0%:18:1E0:38:9:8:1:9 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:21 0/0:0:0:0:0:17:0%:33:1E0:39:17:15:2:17 0/0:0:0:0:0:13:0%:25:1E0:38:13:9:4:14 0/0:0:0:0:0:17:0%:33:1E0:37:17:14:3:17 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:24 0/0:0:0:0:0:11:0%:22:1E0:39:11:9:2:12 0/0:0:0:0:0:24:0%:44:1E0:39:24:18:6:24 0/0:0:0:0:0:18:0%:32:1E0:41:18:13:5:18 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:13 0/0:0:0:0:0:12:0%:21:1E0:37:12:9:3:12 0/0:0:0:0:0:19:0%:37:1E0:37:19:14:5:20 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:28 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:18 0/0:0:0:0:0:13:0%:25:1E0:37:13:11:2:13 0/0:0:0:0:0:7:0%:14:1E0:36:7:6:1:7 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:18 0/0:0:0:0:0:27:0%:52:1E0:37:27:19:8:27 0/0:0:0:0:0:7:0%:14:1E0:37:7:5:2:7 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:41:13:11:2:14 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:12 0/0:0:0:0:0:25:0%:48:1E0:36:25:19:6:26 0/0:37:1:1:0:20:5%:27:5E-1:38:19:16:3:20 0/0:0:0:0:0:29:0%:55:1E0:38:29:20:9:30 0/0:0:0:0:0:12:0%:21:1E0:38:12:9:3:12 0/0:0:0:0:0:10:0%:17:1E0:35:10:6:4:10 0/0:0:0:0:0:18:0%:32:1E0:37:18:12:6:18 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:18 0/0:0:0:0:0:16:0%:29:1E0:38:16:14:2:16 0/0:0:0:0:0:21:0%:40:1E0:37:21:16:5:22 0/0:0:0:0:0:34:0%:62:1E0:37:34:23:11:34 0/0:0:0:0:0:19:0%:37:1E0:37:19:12:7:20 0/0:0:0:0:0:18:0%:32:1E0:36:18:13:5:18 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:11 0/0:0:0:0:0:23:0%:44:1E0:39:23:18:5:24 0/0:0:0:0:0:11:0%:22:1E0:38:11:6:5:11 0/0:0:0:0:0:31:0%:59:1E0:37:31:20:11:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 0/0:0:0:0:0:28:0%:51:1E0:40:28:21:7:29 0/0:0:0:0:0:27:0%:52:1E0:37:27:16:11:27 0/0:0:0:0:0:23:0%:44:1E0:36:23:14:9:23 0/0:0:0:0:0:14:0%:25:1E0:36:14:8:6:17 0/0:0:0:0:0:34:0%:62:1E0:37:34:25:9:34 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:16 0/0:0:0:0:0:17:0%:33:1E0:37:17:14:3:18 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:19:9:28 0/0:0:0:0:0:12:0%:21:1E0:32:12:8:4:13 0/0:0:0:0:0:20:0%:36:1E0:39:20:14:6:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:37:27:14:13:27 0/0:0:0:0:0:20:0%:36:1E0:35:20:11:9:21 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:19 0/0:0:0:0:0:15:0%:29:1E0:34:15:10:5:16 0/0:0:0:0:0:18:0%:32:1E0:37:18:12:6:18 0/0:0:0:0:0:17:0%:33:1E0:35:17:15:2:17 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:18 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:17 0/0:0:0:0:0:15:0%:29:1E0:36:15:10:5:15 0/0:0:0:0:0:11:0%:22:1E0:34:11:7:4:12 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:12 0/0:0:0:0:0:12:0%:21:1E0:35:12:9:3:12 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:12 0/0:0:0:0:0:9:0%:18:1E0:37:9:7:2:9 0/0:0:0:0:0:15:0%:29:1E0:36:15:12:3:15 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:14 0/0:0:0:0:0:19:0%:37:1E0:36:19:16:3:19 0/0:0:0:0:0:11:0%:22:1E0:36:11:9:2:11 0/0:0:0:0:0:19:0%:37:1E0:36:19:18:1:19 0/0:0:0:0:0:11:0%:22:1E0:38:11:10:1:11 0/0:0:0:0:0:7:0%:14:1E0:37:7:3:4:7 0/0:0:0:0:0:13:0%:25:1E0:35:13:9:4:15 0/0:0:0:0:0:24:0%:44:1E0:36:24:18:6:24 0/0:0:0:0:0:11:0%:22:1E0:37:11:6:5:11 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:11 0/0:0:0:0:0:22:0%:40:1E0:37:22:20:2:22 0/0:0:0:0:0:20:0%:36:1E0:37:20:18:2:20 0/0:0:0:0:0:39:0%:74:1E0:36:39:29:10:39 0/0:0:0:0:0:13:0%:25:1E0:37:13:10:3:13 MTB_anc 675728 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|PE_PGRS7_Rv0578c|gene594|transcript|Transcript_gene594|Coding|1/1|c.189C>T|p.Thr63Thr|189/3921|189/3921|63/1306||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.675728G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.675728G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:17:0%:33:1E0:48:17:5:12:18 0/0:0:0:0:0:51:0%:97:1E0:46:51:30:21:51 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:9:19:28 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:48:28:10:18:28 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:36 0/0:0:0:0:0:22:0%:40:1E0:52:22:7:15:22 0/0:0:0:0:0:48:0%:89:1E0:45:48:14:34:48 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:26 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:46 0/0:0:0:0:0:27:0%:52:1E0:46:27:20:7:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:25:0%:48:1E0:50:25:14:11:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:40 0/0:0:0:0:0:48:0%:89:1E0:45:48:19:29:48 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:43 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:54:0%:99:1E0:48:54:27:27:54 0/0:0:0:0:0:35:0%:67:1E0:49:35:19:16:35 0/0:0:0:0:0:45:0%:85:1E0:46:45:23:22:45 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:50:0%:92:1E0:43:50:26:24:52 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:47 0/0:0:0:0:0:38:0%:70:1E0:46:38:26:12:38 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:51 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:47 0/0:0:0:0:0:53:0%:99:1E0:44:53:21:32:53 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:47:0%:89:1E0:48:47:18:29:47 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:0:0:0:0:25:0%:48:1E0:45:25:20:5:25 0/0:0:0:0:0:17:0%:33:1E0:44:17:11:6:17 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:38 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:18:0%:32:1E0:50:18:8:10:18 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:50 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:54:0%:99:1E0:43:54:20:34:54 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:44 0/0:0:0:0:0:48:0%:89:1E0:49:48:26:22:48 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 0/0:0:0:0:0:19:0%:37:1E0:47:19:6:13:19 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:20:0%:36:1E0:46:20:7:13:20 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:16:0%:29:1E0:55:16:9:7:17 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:47 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:26 0/0:0:0:0:0:57:0%:99:1E0:45:57:29:28:58 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:38 0/0:0:0:0:0:52:0%:96:1E0:41:52:21:31:52 0/0:0:0:0:0:47:0%:89:1E0:42:47:18:29:47 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:37:1:1:0:32:3.12%:48:5E-1:44:31:13:18:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:19:28:49 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:60:1:1:0:30:3.33%:44:5E-1:40:29:17:12:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:44 0/0:0:0:0:0:56:0%:99:1E0:39:56:23:33:58 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:42:0%:77:1E0:49:42:22:20:43 0/0:0:0:0:0:34:0%:62:1E0:45:34:10:24:35 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:51 0/0:0:0:0:0:58:0%:99:1E0:43:58:36:22:58 0/0:39:1:0:1:27:3.7%:41:5E-1:40:26:11:15:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:34 0/0:0:0:0:0:43:0%:82:1E0:38:43:22:21:45 0/0:0:0:0:0:36:0%:66:1E0:39:36:22:14:39 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:47 0/0:0:0:0:0:45:0%:85:1E0:40:45:30:15:46 0/0:0:0:0:0:51:0%:97:1E0:44:51:21:30:52 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:46 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:40 0/0:0:0:0:0:42:0%:77:1E0:39:42:24:18:46 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:31 0/0:0:0:0:0:44:0%:81:1E0:37:44:20:24:45 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:40 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:54:0%:99:1E0:44:54:26:28:56 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/1:41:11:6:5:31:35.48%:37:1.6659E-4:46:20:13:7:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:60:0%:99:1E0:40:60:23:37:60 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 MTB_anc 676667 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0579_Rv0579|gene595|transcript|Transcript_gene595|Coding|1/1|c.430C>G|p.Arg144Gly|430/759|430/759|144/252||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.676667C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.676667C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:23:15:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:27:14:13:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:34:20:14:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:61:40:21:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:59:37:22:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:26:13:13:27:96.3%:99:2.0165E-15:0:0:0:0:29 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:27:7:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:63:33:30:63:100%:99:1.657E-37:0:0:0:0:66 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:40:23:17:41:97.56%:99:9.8874E-23:60:1:1:0:41 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 677093 . TTCGGCGCGGCCGGCGCACGC T . PASS AC=13;AF=0.043;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0579_Rv0579-Rv0580c_Rv0580c|gene595-gene596|intergenic_region|gene595-gene596|||n.677094_677113delTCGGCGCGGCCGGCGCACGC||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:40:53:20:33:54 0/0:0:0:0:0:15:0%:29:1E0:44:15:6:9:15 0/0:0:0:0:0:53:0%:99:1E0:44:53:19:34:53 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:24 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:7:23:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:28 0/0:0:0:0:0:49:0%:93:1E0:41:49:20:29:50 0/0:0:0:0:0:10:0%:17:1E0:43:10:3:7:10 0/0:0:0:0:0:54:0%:99:1E0:46:54:23:31:56 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:35 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:29 0/0:0:0:0:0:33:0%:63:1E0:49:33:13:20:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:28 0/0:0:0:0:0:60:0%:99:1E0:44:60:32:28:63 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:37 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:9:20:30 0/0:0:0:0:0:21:0%:40:1E0:47:21:5:16:22 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:46:0%:85:1E0:44:46:16:30:46 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:27 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:47 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:55:0%:99:1E0:45:55:23:32:57 0/0:0:0:0:0:51:0%:97:1E0:47:51:30:21:55 0/0:0:0:0:0:35:0%:67:1E0:47:35:12:23:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:42 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:48 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:20 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:27 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:47 0/0:0:0:0:0:54:0%:99:1E0:44:54:26:28:59 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:54:0%:99:1E0:41:54:24:30:55 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:40 0/0:0:0:0:0:42:0%:77:1E0:45:42:15:27:43 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:17 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:45 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:28:0%:51:1E0:47:28:18:10:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:18:29:49 0/0:0:0:0:0:50:0%:92:1E0:41:50:21:29:51 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:34 0/0:0:0:0:0:63:0%:99:1E0:42:63:33:30:64 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:11:24:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:43 0/0:0:0:0:0:38:0%:70:1E0:44:38:10:28:40 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:21 0/0:0:0:0:0:51:0%:97:1E0:41:51:18:33:54 0/0:0:0:0:0:63:0%:99:1E0:47:63:27:36:63 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:36 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:45 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:23:0%:44:1E0:48:23:8:15:24 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:27:0%:52:1E0:51:27:9:18:27 0/0:0:0:0:0:17:0%:33:1E0:46:17:2:15:17 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:52 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:31 0/0:0:0:0:0:51:0%:97:1E0:43:51:20:31:51 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:47 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:7:24:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:20:0%:36:1E0:48:20:8:12:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:8:21:31 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:63:0%:99:1E0:41:63:26:37:65 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:46 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:28 0/0:0:0:0:0:16:0%:29:1E0:42:16:10:6:16 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:33 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:30 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:15:30:45 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:23 0/0:0:0:0:0:14:0%:25:1E0:39:14:8:6:14 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 1/1:41:30:14:16:33:90.91%:99:9.89E-16:33:3:2:1:33 1/1:43:37:19:18:40:90.24%:99:3.5075E-19:34:4:1:3:41 1/1:40:27:11:16:28:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:26 0/1:42:29:11:18:32:87.88%:99:9.1482E-15:35:4:1:3:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:34 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:21 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:48 0/0:0:0:0:0:63:0%:99:1E0:41:63:29:34:66 1/1:45:30:13:17:32:93.75%:99:3.0612E-16:38:2:2:0:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:50:0%:92:1E0:39:50:18:32:52 0/0:0:0:0:0:43:0%:82:1E0:38:43:18:25:46 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:53 0/0:0:0:0:0:43:0%:82:1E0:38:43:12:31:45 0/0:0:0:0:0:43:0%:82:1E0:40:43:18:25:45 0/1:38:33:13:20:35:86.84%:99:1.3966E-16:35:5:0:5:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:42 0/1:38:34:14:20:40:82.93%:99:1.7333E-16:40:7:3:4:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:39 0/0:0:0:0:0:36:0%:66:1E0:37:36:13:23:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:34 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 0/0:0:0:0:0:54:0%:99:1E0:38:54:20:34:57 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:47 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:31 0/0:0:0:0:0:55:0%:99:1E0:41:55:29:26:55 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 MTB_anc 677685 . G GCGCCA . PASS AC=256;AF=0.853;AN=300;ANN=GCGCCA|intergenic_region|MODIFIER|Rv0580c_Rv0580c-vapB26_Rv0581|gene596-gene597|intergenic_region|gene596-gene597|||n.677685_677686insCGCCA||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:32:19:13:33:96.97%:99:4.7095E-18:38:1:0:1:34 0/1:46:16:7:9:17:88.89%:76:2.0936E-8:49:2:0:2:18 1/1:45:44:22:22:45:95.65%:99:4.4304E-25:60:1:1:0:45 0/1:48:26:10:16:29:89.66%:99:1.6496E-13:32:3:1:2:29 1/1:50:27:17:10:30:90%:99:4.6134E-14:52:3:3:0:30 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 0/1:49:26:13:13:31:83.87%:99:3.9214E-13:42:4:2:2:31 1/1:45:29:18:11:32:90.62%:99:3.5714E-15:38:3:0:3:32 0/1:52:29:17:12:34:80.56%:99:4.008E-14:47:6:4:2:35 1/1:48:33:15:18:35:94.29%:99:5.9366E-18:47:2:0:2:35 0/1:49:31:21:10:36:86.11%:99:1.6935E-15:37:5:4:1:36 1/1:45:35:11:24:36:94.59%:99:4.2437E-19:33:2:1:1:38 1/1:50:23:10:13:23:95.83%:99:7.7525E-13:60:1:1:0:24 1/1:46:46:22:24:50:92%:99:3.1346E-24:34:4:2:2:50 1/1:40:38:15:23:37:97.44%:99:1.4697E-21:60:1:0:1:39 0/1:51:22:10:12:25:88%:99:2.5916E-11:31:3:2:1:25 1/1:48:27:15:12:27:93.1%:99:1.5465E-14:49:2:2:0:29 1/1:45:19:6:13:19:95%:98:1.5234E-10:34:1:0:1:21 1/1:41:24:13:11:26:92.31%:99:7.6222E-13:60:2:1:1:27 1/1:48:33:21:12:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:21:11:10:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:58:36:22:61:90.62%:99:4.7391E-31:47:4:0:4:64 0/1:50:15:6:9:19:78.95%:66:2.5053E-7:48:4:2:2:19 1/1:46:33:16:17:33:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:45:35:24:11:37:94.59%:99:8.3613E-20:32:1:0:1:37 0/1:41:18:5:13:20:85.71%:84:3.7603E-9:52:3:2:1:21 1/1:50:18:13:5:18:94.74%:92:5.6585E-10:60:1:0:1:19 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:20:11:9:22:90.91%:99:4.0873E-11:48:1:0:1:22 1/1:42:32:16:16:33:94.12%:99:2.2142E-17:49:2:1:1:34 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:19:11:8:21:90.48%:93:4.7003E-10:47:2:1:1:21 1/1:44:25:14:11:25:96.15%:99:5.4444E-14:39:1:1:0:27 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:15:13:29:96.55%:99:9.9776E-16:37:1:1:0:29 0/1:40:26:14:12:28:89.66%:99:5.6872E-14:35:2:2:0:29 1/1:47:34:19:15:35:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:47:53:29:24:57:92.98%:99:8.323E-29:42:3:3:0:57 1/1:46:38:19:19:40:92.68%:99:3.1178E-20:35:3:3:0:41 0/1:44:38:12:26:43:88.37%:99:2.5797E-19:34:5:2:3:43 1/1:44:34:18:16:36:94.44%:99:3.2089E-19:38:1:1:0:36 1/1:46:24:12:12:25:96%:99:2.0568E-13:60:1:1:0:26 1/1:50:27:14:13:29:93.1%:99:1.5465E-14:49:2:1:1:29 0/1:44:31:17:14:35:88.57%:99:7.3316E-16:41:4:2:2:35 0/1:45:23:8:15:25:88.46%:99:7.3681E-12:44:3:2:1:27 0/1:46:23:9:14:26:88.46%:99:7.3681E-12:44:3:1:2:26 1/1:41:42:23:19:42:97.67%:99:6.6289E-24:60:1:1:0:43 1/1:43:32:19:13:32:94.12%:99:2.2142E-17:44:2:1:1:34 1/1:45:40:20:20:41:95.24%:99:5.6346E-22:47:2:1:1:42 1/1:46:19:10:9:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:43:52:27:25:54:96.3%:99:6.1952E-29:36:2:1:1:54 1/1:44:19:10:9:20:90.48%:93:4.7003E-10:34:2:0:2:22 1/1:44:33:20:13:36:91.67%:99:2.0653E-17:43:3:3:0:36 0/1:46:26:10:16:28:89.66%:99:1.6496E-13:42:3:1:2:29 1/1:47:31:16:15:33:93.94%:99:8.2416E-17:46:2:2:0:33 1/1:42:32:16:16:35:91.43%:99:7.5196E-17:34:3:2:1:35 0/1:44:33:15:18:37:89.19%:99:2.0653E-17:33:3:1:2:37 1/1:43:40:23:17:43:93.02%:99:2.287E-21:43:3:0:3:43 1/1:47:36:18:18:38:94.74%:99:1.1316E-19:60:2:2:0:38 0/1:48:19:9:10:22:86.36%:89:1.0931E-9:35:3:1:2:23 0/1:49:25:13:12:28:89.29%:99:5.8768E-13:36:3:1:2:28 0/1:46:31:18:13:35:88.57%:99:7.3316E-16:47:4:2:2:35 0/1:42:25:8:17:27:89.29%:99:5.8768E-13:33:3:1:2:28 0/1:45:38:16:22:45:84.44%:99:1.2885E-18:41:7:2:5:45 1/1:45:53:25:28:55:96.36%:99:1.6199E-29:35:2:0:2:55 1/1:43:30:16:14:30:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:47:46:25:21:48:93.88%:99:1.9036E-25:35:2:1:1:49 0/1:46:17:10:7:19:89.47%:82:5.9414E-9:60:2:0:2:19 0/1:45:18:7:11:24:75%:79:1.1937E-8:43:5:3:2:24 1/1:50:28:15:13:30:90.32%:99:4.194E-15:34:2:2:0:31 0/1:48:22:12:10:26:84.62%:99:5.5261E-11:33:4:0:4:26 1/1:49:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:46:35:19:16:40:85.37%:99:2.5278E-17:52:6:2:4:41 1/1:43:37:26:11:38:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:42:18:11:7:20:90%:87:1.6758E-9:35:2:1:1:20 1/1:41:35:15:20:37:94.59%:99:4.2437E-19:48:2:1:1:37 1/1:49:33:19:14:36:91.67%:99:2.0653E-17:51:3:1:2:36 1/1:42:33:19:14:36:91.67%:99:2.0653E-17:33:3:2:1:36 0/1:45:24:12:12:27:88.89%:99:2.0853E-12:34:3:1:2:27 1/1:44:26:12:14:27:96.3%:99:1.4382E-14:35:1:0:1:27 1/1:45:23:15:8:25:92%:99:2.7767E-12:48:2:1:1:25 1/1:41:23:10:13:21:95.83%:99:1.2146E-13:0:0:0:0:23 0/1:45:22:9:13:24:88%:99:2.5916E-11:33:3:2:1:25 1/1:41:33:16:17:33:94.29%:99:5.9366E-18:35:2:1:1:35 1/1:42:36:15:21:37:94.74%:99:1.1316E-19:37:2:2:0:38 1/1:40:38:20:18:38:95%:99:8.0088E-21:47:2:2:0:40 0/1:43:22:12:10:25:88%:99:2.5916E-11:60:3:1:2:25 1/1:50:33:15:18:36:91.67%:99:2.0653E-17:45:3:2:1:36 1/1:46:20:8:12:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:32:13:19:34:94.12%:99:2.2142E-17:49:2:0:2:34 1/1:52:35:18:17:37:94.59%:99:4.2437E-19:60:2:0:2:37 1/1:43:52:24:28:56:92.86%:99:1.2485E-27:42:4:1:3:56 1/1:42:29:14:15:32:90.62%:99:3.5714E-15:37:3:1:2:32 0/1:44:33:14:19:37:89.19%:99:5.7997E-17:35:4:2:2:37 1/1:46:16:6:10:17:94.12%:81:7.7134E-9:37:1:1:0:17 0/1:40:25:14:11:28:86.21%:99:1.3609E-12:36:4:0:4:29 0/1:43:28:13:15:34:82.35%:99:1.349E-13:35:6:3:3:34 1/1:42:31:18:13:33:91.18%:99:2.7308E-16:35:3:2:1:34 1/1:42:41:21:20:44:93.18%:99:6.1775E-22:43:3:2:1:44 1/1:47:29:16:13:30:96.67%:99:2.6212E-16:34:1:1:0:30 0/1:47:28:14:14:32:87.5%:99:3.2142E-14:43:4:2:2:32 1/1:41:32:14:18:30:96.97%:99:4.7095E-18:32:1:1:0:33 1/1:46:20:10:10:22:90.91%:98:1.3117E-10:33:2:0:2:22 1/1:42:15:9:6:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:32:17:15:33:96.97%:99:4.7095E-18:33:1:1:0:33 1/1:44:36:16:20:36:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:47:33:16:17:36:91.67%:99:2.0653E-17:42:3:0:3:36 0/1:46:39:26:13:45:86.67%:99:1.7346E-19:43:6:3:3:45 0/1:45:31:16:15:37:83.78%:99:3.4914E-15:40:6:4:2:37 0/1:46:24:11:13:28:85.71%:99:4.7015E-12:37:4:2:2:28 0/1:43:25:11:14:28:89.29%:99:5.8768E-13:34:3:2:1:28 1/1:37:22:12:10:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:19:15:33:97.14%:99:3.2089E-19:38:1:0:1:35 0/1:38:32:20:12:34:88.89%:99:2.0653E-16:34:4:1:3:36 0/1:42:31:18:13:36:83.78%:99:1.6935E-15:35:5:3:2:37 0/1:39:32:22:10:35:88.89%:99:2.0653E-16:34:4:1:3:36 1/1:45:36:17:19:37:97.3%:99:2.1762E-20:33:1:1:0:37 1/1:41:27:15:12:28:96.43%:99:3.7915E-15:38:1:0:1:28 1/1:45:49:25:24:53:92.45%:99:6.2975E-26:35:4:1:3:53 0/1:43:47:29:18:53:88.68%:99:7.1833E-24:35:6:2:4:53 1/1:41:33:22:11:34:97.06%:99:1.2301E-18:35:1:0:1:35 1/1:43:27:14:13:30:90%:99:4.6134E-14:33:3:1:2:30 0/1:37:32:17:15:32:88.89%:99:2.0653E-16:34:4:1:3:37 1/1:43:35:20:15:37:94.59%:99:4.2437E-19:32:2:2:0:37 1/1:41:51:29:22:52:94.44%:99:1.1771E-27:35:3:1:2:54 1/1:39:47:23:24:50:94%:99:2.3219E-25:36:3:2:1:54 0/1:45:36:19:17:41:87.8%:99:1.2627E-18:32:4:3:1:41 1/1:40:41:23:18:44:91.11%:99:2.0407E-21:35:4:3:1:45 1/1:40:31:18:13:29:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:33:19:14:32:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:37:22:15:37:94.87%:99:3.0128E-20:32:2:1:1:39 1/1:43:34:18:16:34:94.44%:99:3.2089E-19:37:1:0:1:36 0/1:40:37:20:17:41:88.1%:99:9.1365E-19:30:5:4:1:42 1/1:42:33:22:11:35:91.67%:99:2.0653E-17:41:3:2:1:37 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:51:20:31:55:91.07%:99:1.5231E-26:35:5:2:3:56 1/1:46:41:22:19:42:97.62%:99:2.5612E-23:60:1:1:0:42 0/1:42:29:11:18:36:78.38%:99:4.008E-14:35:6:4:2:38 1/1:40:46:24:22:48:92%:99:3.1346E-24:40:4:2:2:50 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 0/1:40:24:11:13:27:88.89%:99:2.0853E-12:36:3:2:1:27 1/1:41:40:18:22:41:95.24%:99:5.6346E-22:37:2:2:0:42 1/1:43:27:10:17:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:27:13:14:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:42:27:15:12:28:93.1%:99:1.5465E-14:37:2:1:1:29 1/1:44:30:17:13:32:90.91%:99:9.89E-16:36:3:2:1:34 1/1:44:38:16:22:40:92.68%:99:3.1178E-20:45:3:1:2:41 1/1:44:48:32:16:48:96%:99:1.3143E-26:49:2:2:0:50 1/1:43:38:18:20:39:97.44%:99:1.4697E-21:30:1:1:0:39 MTB_anc 679833 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0584_Rv0584|gene600|transcript|Transcript_gene600|Coding|1/1|c.605C>T|p.Thr202Ile|605/2634|605/2634|202/877||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.679833C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.679833C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:47:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:52:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:49:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:49:30:19:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:46:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:48:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:48:34:14:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:14:14:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:47:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:63:42:21:63:100%:99:1.657E-37:0:0:0:0:64 1/1:42:63:34:29:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:44:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:66:39:27:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:41:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:62:37:25:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:61:35:26:61:100%:99:2.609E-36:0:0:0:0:64 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 681601 . C A . PASS AC=70;AF=0.233;AN=300;ANN=A|synonymous_variant|LOW|Rv0584_Rv0584|gene600|transcript|Transcript_gene600|Coding|1/1|c.2373C>A|p.Thr791Thr|2373/2634|2373/2634|791/877||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.681601C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.681601C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:44 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:9:21:30 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:60:1:1:0:34:2.94%:51:5E-1:46:33:14:19:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:49 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:44 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:38:18:20:39:97.44%:99:1.4697E-21:60:1:0:1:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:7:21:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:38:1:1:0:27:3.7%:41:5E-1:44:26:11:15:28 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:26 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:45 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:16:0%:29:1E0:49:16:9:7:16 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:25 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:33 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:39:1:0:1:35:2.86%:55:5E-1:45:34:17:17:35 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:52:0%:96:1E0:45:52:27:25:52 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:50 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:38:1:0:1:37:2.7%:59:5E-1:45:36:18:18:37 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:18 0/0:0:0:0:0:49:0%:93:1E0:43:49:21:28:50 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:36 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:52:0%:96:1E0:42:52:23:29:52 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:46 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:37:1:0:1:50:2%:80:5E-1:42:49:24:25:51 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:27 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:53 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:47 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:16 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:56:0%:99:1E0:43:56:27:29:56 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:26 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 1/1:49:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:41 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:38:1:1:0:27:3.7%:41:5E-1:48:26:9:17:27 0/0:0:0:0:0:38:0%:70:1E0:39:38:25:13:38 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:49:0%:93:1E0:44:49:22:27:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:43 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:21 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:38 0/0:0:0:0:0:21:0%:40:1E0:42:21:6:15:21 0/0:0:0:0:0:53:0%:99:1E0:40:53:24:29:53 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:47 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:22 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:42:0%:77:1E0:37:42:21:21:42 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:35:0%:67:1E0:38:35:13:22:36 1/1:40:39:18:21:40:97.5%:99:3.8137E-22:33:1:0:1:41 0/0:0:0:0:0:23:0%:44:1E0:36:23:7:16:25 0/0:0:0:0:0:38:0%:70:1E0:37:38:16:22:38 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:38 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:46:0%:85:1E0:39:46:19:27:46 0/0:31:1:1:0:43:2.33%:70:5E-1:42:42:21:21:43 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:33 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:44 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:33 1/1:43:37:19:18:38:97.37%:99:5.6582E-21:36:1:0:1:38 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:32 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:41 0/0:0:0:0:0:56:0%:99:1E0:43:56:27:29:56 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 MTB_anc 684290 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv0585c_Rv0585c-mce2R_Rv0586|gene601-gene602|intergenic_region|gene601-gene602|||n.684290G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:51:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:59:21:38:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:52:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:41:20:21:42:97.62%:99:2.5612E-23:60:1:0:1:43 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:49:17:32:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:63:29:34:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:68:27:41:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:41:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:73:34:39:73:100%:99:1.7006E-43:0:0:0:0:77 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 MTB_anc 686252 . A AT . PASS AC=2;AF=6.667e-03;AN=300;ANN=AT|frameshift_variant|HIGH|Rv0588_Rv0588|gene604|transcript|Transcript_gene604|Coding|1/1|c.326dupT|p.Gly110fs|327/888|327/888|109/295||INFO_REALIGN_3_PRIME,AT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.686252_686253insT||||||,AT|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.686252_686253insT||||||;HET=0;LOF=(Rv0588_Rv0588|gene604|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:45:52:21:31:52 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:36 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:26 0/0:0:0:0:0:32:0%:59:1E0:50:32:18:14:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:51:30:15:15:32 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:50:0%:92:1E0:43:50:22:28:53 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:60:0%:99:1E0:43:60:24:36:60 0/0:0:0:0:0:31:0%:59:1E0:45:31:9:22:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:29:0%:55:1E0:47:29:10:19:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:53:0%:99:1E0:45:53:21:32:54 0/0:0:0:0:0:28:0%:51:1E0:49:28:18:10:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:26:1:1:0:40:2.5%:62:5E-1:41:39:17:22:40 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:29 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:40 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:45 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:49 0/0:0:0:0:0:41:0%:78:1E0:46:41:18:23:41 0/0:0:0:0:0:50:0%:92:1E0:45:50:31:19:53 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:40 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:43 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:41 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:46 0/0:0:0:0:0:52:0%:96:1E0:46:52:22:30:53 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:16:33:49 0/0:0:0:0:0:17:0%:33:1E0:48:17:5:12:17 0/0:0:0:0:0:43:0%:82:1E0:46:43:16:27:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:57:0%:99:1E0:39:57:24:33:58 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:29 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:46 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:54:0%:99:1E0:46:54:28:26:57 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:48:0%:89:1E0:45:48:26:22:48 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:56:0%:99:1E0:44:56:32:24:56 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:23 0/0:0:0:0:0:27:0%:52:1E0:52:27:17:10:27 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:50:29:17:12:29 0/0:0:0:0:0:17:0%:33:1E0:46:17:5:12:17 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:58:0%:99:1E0:41:58:22:36:58 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:30:0%:55:1E0:47:30:20:10:30 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:7:21:28 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:54 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:49 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:20 0/0:0:0:0:0:37:0%:70:1E0:47:37:14:23:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:34 0/0:0:0:0:0:50:0%:92:1E0:41:50:20:30:50 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:41 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:23 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:10:24:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:8:18:27 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:21 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:22 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:33 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:40 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:32 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:47 0/0:0:0:0:0:61:0%:99:1E0:42:61:35:26:61 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:20 1/1:41:24:12:12:25:96%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:40:0%:74:1E0:39:40:14:26:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:45:0%:85:1E0:40:45:15:30:46 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:50 0/0:0:0:0:0:38:0%:70:1E0:38:38:17:21:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:39 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:41:0%:78:1E0:38:41:22:19:43 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:44 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:53:0%:99:1E0:40:53:21:32:56 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:40 0/0:0:0:0:0:44:0%:81:1E0:43:44:9:35:44 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:41 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:45:0%:85:1E0:38:45:20:25:46 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:45 MTB_anc 686655 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0588_Rv0588|gene604|transcript|Transcript_gene604|Coding|1/1|c.728C>T|p.Thr243Ile|728/888|728/888|243/295||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.686655C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.686655C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:50:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:28:19:9:29:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:24:11:13:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:44:21:14:7:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:34:20:14:35:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:48:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:43:27:16:44:97.73%:99:1.7144E-24:60:1:0:1:45 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 MTB_anc 686658 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv0588_Rv0588|gene604|transcript|Transcript_gene604|Coding|1/1|c.731A>C|p.His244Pro|731/888|731/888|244/295||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.686658A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.686658A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:49 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:54:0%:99:1E0:47:54:28:26:55 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:26 0/0:0:0:0:0:48:0%:89:1E0:47:48:24:24:49 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:38 0/0:0:0:0:0:38:0%:70:1E0:50:38:20:18:38 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:52 0/0:0:0:0:0:37:0%:70:1E0:50:37:25:12:37 0/0:0:0:0:0:40:0%:74:1E0:48:40:25:15:42 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:20:0%:36:1E0:48:20:6:14:20 0/0:0:0:0:0:29:0%:55:1E0:48:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:0:0:0:0:53:0%:99:1E0:46:53:28:25:56 0/0:0:0:0:0:35:0%:67:1E0:45:35:25:10:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:11:21:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:40:0%:74:1E0:46:40:27:13:40 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:8:20:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:52:0%:96:1E0:47:52:24:28:52 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:42 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:45 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:31 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:16:6:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:10:21:31 1/1:44:34:19:15:35:97.14%:99:3.2089E-19:38:1:0:1:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:42 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:30:0%:55:1E0:48:30:10:20:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:28 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:45:0%:85:1E0:48:45:22:23:45 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:32 0/0:35:1:1:0:54:1.85%:87:5E-1:48:53:21:32:54 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:12:0%:21:1E0:47:12:5:7:12 0/0:0:0:0:0:29:0%:55:1E0:48:29:21:8:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:32 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:50:35:13:22:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:20:10:31 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:46:0%:85:1E0:46:46:23:23:46 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:19:10:29 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:46 0/0:0:0:0:0:22:0%:40:1E0:43:22:17:5:22 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:48:30:22:8:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:44:0%:81:1E0:46:44:24:20:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:34 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:50 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:34 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:21 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:44 0/0:0:0:0:0:55:0%:99:1E0:42:55:25:30:56 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:31 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:17 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:32 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:44 0/0:0:0:0:0:34:0%:62:1E0:41:34:24:10:35 0/0:0:0:0:0:39:0%:74:1E0:42:39:25:14:40 0/0:0:0:0:0:52:0%:96:1E0:40:52:28:24:52 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:48 0/0:0:0:0:0:51:0%:97:1E0:44:51:21:30:51 0/0:0:0:0:0:55:0%:99:1E0:43:55:35:20:55 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:45 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:42 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:52:0%:96:1E0:43:52:22:30:55 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:35 MTB_anc 687427 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|mce2A_Rv0589|gene605|transcript|Transcript_gene605|Coding|1/1|c.607C>A|p.Leu203Met|607/1215|607/1215|203/404||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.687427C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.687427C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:52:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:53:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:14:10:25:96%:99:2.0568E-13:34:1:0:1:25 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:33:28:5:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:64:37:27:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:31:26:5:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:65:38:27:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 687906 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|stop_gained|HIGH|mce2A_Rv0589|gene605|transcript|Transcript_gene605|Coding|1/1|c.1086G>A|p.Trp362*|1086/1215|1086/1215|362/404||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.687906G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.687906G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:38 0/0:0:0:0:0:33:0%:63:1E0:54:33:15:18:33 0/0:0:0:0:0:45:0%:85:1E0:47:45:24:21:47 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:33 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:34 0/0:0:0:0:0:36:0%:66:1E0:49:36:21:15:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:46:0%:85:1E0:45:46:21:25:46 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:48:0%:89:1E0:43:48:28:20:49 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:30:0%:55:1E0:49:30:11:19:31 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:51:22:10:12:22 0/0:0:0:0:0:20:0%:36:1E0:45:20:7:13:21 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:43 0/0:0:0:0:0:42:0%:77:1E0:48:42:21:21:42 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:50 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:50:36:19:17:37 0/0:0:0:0:0:20:0%:36:1E0:44:20:4:16:20 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:39:0%:74:1E0:48:39:18:21:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:31 0/0:0:0:0:0:24:0%:44:1E0:50:24:7:17:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:63:0%:99:1E0:47:63:33:30:63 0/0:0:0:0:0:38:0%:70:1E0:44:38:13:25:38 0/0:0:0:0:0:45:0%:85:1E0:46:45:23:22:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:48 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:27 0/0:0:0:0:0:50:0%:92:1E0:45:50:30:20:50 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:42:0%:77:1E0:49:42:21:21:43 0/0:0:0:0:0:15:0%:29:1E0:52:15:5:10:15 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:37 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:51 0/0:0:0:0:0:25:0%:48:1E0:52:25:11:14:25 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:48 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:48:0%:89:1E0:44:48:19:29:48 0/0:0:0:0:0:37:0%:70:1E0:50:37:18:19:38 0/0:0:0:0:0:36:0%:66:1E0:49:36:14:22:37 0/0:0:0:0:0:44:0%:81:1E0:46:44:20:24:44 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:39:1:1:0:30:3.33%:44:5E-1:46:29:14:15:30 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:16 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:34 0/0:0:0:0:0:27:0%:52:1E0:53:27:9:18:27 0/0:0:0:0:0:11:0%:22:1E0:52:11:8:3:11 0/0:0:0:0:0:33:0%:63:1E0:49:33:19:14:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:14 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:45:0%:85:1E0:48:45:23:22:45 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:43:0%:82:1E0:47:43:27:16:43 0/0:0:0:0:0:18:0%:32:1E0:49:18:6:12:18 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:30:0%:55:1E0:54:30:15:15:30 0/0:0:0:0:0:52:0%:96:1E0:40:52:28:24:53 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:46 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:47 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:20:0%:36:1E0:44:20:5:15:20 0/0:0:0:0:0:31:0%:59:1E0:48:31:20:11:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:41:0%:78:1E0:47:41:18:23:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:17:9:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:26 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:50 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:54:0%:99:1E0:42:54:22:32:55 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:42 0/0:0:0:0:0:54:0%:99:1E0:38:54:24:30:54 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:39 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:42 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:52 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:55:0%:99:1E0:39:55:21:34:55 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:37 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:33 0/0:60:1:1:0:45:2.22%:73:5E-1:41:44:22:22:48 0/0:0:0:0:0:61:0%:99:1E0:43:61:26:35:62 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 MTB_anc 688194 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.688194G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.688194G>A||||||,A|intergenic_region|MODIFIER|mce2A_Rv0589-mce2C_Rv0591|gene605-gene606|intergenic_region|gene605-gene606|||n.688194G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:21:0%:40:1E0:52:21:8:13:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:34 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:36 0/0:0:0:0:0:35:0%:67:1E0:48:35:25:10:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:45 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:40:0%:74:1E0:46:40:31:9:40 0/0:0:0:0:0:38:0%:70:1E0:38:38:25:13:38 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:58:0%:99:1E0:43:58:31:27:59 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:31 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:15 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:19:7:26 0/0:0:0:0:0:50:0%:92:1E0:42:50:32:18:51 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:60:1:0:1:34:2.94%:51:5E-1:41:33:21:12:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:24:0%:44:1E0:52:24:14:10:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:25 0/0:0:0:0:0:49:0%:93:1E0:50:49:23:26:51 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:54:0%:99:1E0:43:54:35:19:54 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:45 0/0:60:1:1:0:41:2.44%:66:5E-1:45:40:20:20:41 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:29 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:23 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:37 0/0:0:0:0:0:18:0%:32:1E0:39:18:12:6:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:24:12:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:26:13:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:21:10:31 0/0:0:0:0:0:57:0%:99:1E0:44:57:32:25:57 0/0:0:0:0:0:23:0%:44:1E0:51:23:14:9:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:20 0/0:0:0:0:0:20:0%:36:1E0:52:20:8:12:20 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:43 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:17:0%:33:1E0:42:17:10:7:17 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:34 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:30 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:20 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:60:1:0:1:32:3.12%:48:5E-1:44:31:11:20:32 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:17:7:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:28:8:36 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:15:7:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:45 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:46:0%:85:1E0:45:46:25:21:47 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:39:25:21:4:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:41:0%:78:1E0:40:41:30:11:43 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:42:29:25:4:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:21:8:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:16:6:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:22:11:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:18:9:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:27 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:19 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:29 0/0:0:0:0:0:49:0%:93:1E0:40:49:34:15:49 0/0:0:0:0:0:28:0%:51:1E0:37:28:19:9:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:26:10:36 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:21 0/0:0:0:0:0:63:0%:99:1E0:44:63:34:29:64 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:49 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:36:1:0:1:13:7.69%:18:5E-1:44:12:10:2:15 0/0:0:0:0:0:50:0%:92:1E0:39:50:32:18:50 0/0:0:0:0:0:40:0%:74:1E0:39:40:28:12:42 0/0:0:0:0:0:45:0%:85:1E0:39:45:30:15:46 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:25:12:40 0/0:0:0:0:0:33:0%:63:1E0:38:33:23:10:33 0/0:0:0:0:0:42:0%:77:1E0:40:42:30:12:43 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:38:0%:70:1E0:38:38:31:7:40 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:47:0%:89:1E0:39:47:30:17:47 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:37 0/0:0:0:0:0:49:0%:93:1E0:37:49:31:18:50 0/0:0:0:0:0:46:0%:85:1E0:41:46:28:18:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:27:8:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:27:15:42 0/0:0:0:0:0:15:0%:29:1E0:44:15:10:5:15 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:19:0%:37:1E0:39:19:13:6:19 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:50:0%:92:1E0:45:50:29:21:51 0/0:0:0:0:0:48:0%:89:1E0:39:48:31:17:48 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:46 MTB_anc 688706 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.688706G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.688706G>A||||||,A|intergenic_region|MODIFIER|mce2A_Rv0589-mce2C_Rv0591|gene605-gene606|intergenic_region|gene605-gene606|||n.688706G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:42:50:22:28:50 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:20 0/0:0:0:0:0:67:0%:99:1E0:46:67:38:29:67 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:41 0/0:0:0:0:0:32:0%:59:1E0:47:32:22:10:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:31:0%:59:1E0:51:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:19:8:27 0/0:60:1:0:1:37:2.7%:59:5E-1:50:36:24:12:38 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:51:0%:97:1E0:48:51:29:22:51 0/0:0:0:0:0:25:0%:48:1E0:51:25:16:9:27 0/0:0:0:0:0:71:0%:99:1E0:46:71:39:32:72 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:36 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:23 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:20 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:58:0%:99:1E0:44:58:31:27:58 0/0:0:0:0:0:34:0%:62:1E0:50:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:11:20:31 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:38:1:1:0:34:2.94%:51:5E-1:46:33:21:12:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:38:0%:70:1E0:50:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:26:15:41 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:60:1:0:1:57:1.75%:95:5E-1:50:56:24:32:58 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:44 0/0:0:0:0:0:45:0%:85:1E0:48:45:26:19:46 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:43 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:31:0%:59:1E0:48:31:22:9:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:47 0/0:0:0:0:0:46:0%:85:1E0:47:46:27:19:46 0/0:0:0:0:0:38:0%:70:1E0:49:38:10:28:38 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:20:0%:36:1E0:50:20:8:12:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:55:0%:99:1E0:45:55:30:25:55 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:47 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:51:0%:97:1E0:47:51:22:29:51 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:20:0%:36:1E0:49:20:8:12:20 0/0:0:0:0:0:50:0%:92:1E0:46:50:25:25:51 0/0:0:0:0:0:28:0%:51:1E0:51:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:47:45:19:26:46 0/0:0:0:0:0:52:0%:96:1E0:45:52:25:27:53 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:51:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:50:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:51:29:16:13:29 0/0:0:0:0:0:14:0%:25:1E0:52:14:8:6:14 0/0:0:0:0:0:20:0%:36:1E0:53:20:8:12:20 0/0:0:0:0:0:45:0%:85:1E0:43:45:16:29:47 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:38 0/0:0:0:0:0:36:0%:66:1E0:48:36:24:12:36 0/0:0:0:0:0:33:0%:63:1E0:48:33:21:12:33 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:44 0/0:0:0:0:0:43:0%:82:1E0:47:43:29:14:44 0/0:0:0:0:0:22:0%:40:1E0:47:22:6:16:23 0/0:0:0:0:0:49:0%:93:1E0:46:49:31:18:49 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:23:0%:44:1E0:54:23:9:14:23 0/0:0:0:0:0:55:0%:99:1E0:41:55:25:30:55 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:23:0%:44:1E0:48:23:8:15:23 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:41:0%:78:1E0:42:41:14:27:41 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:0:0:0:0:62:0%:99:1E0:42:62:34:28:62 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:44:0%:81:1E0:47:44:24:20:47 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:49 0/0:0:0:0:0:63:0%:99:1E0:42:63:34:29:64 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:51:0%:97:1E0:41:51:30:21:52 0/0:0:0:0:0:45:0%:85:1E0:46:45:28:17:46 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:44 0/0:0:0:0:0:50:0%:92:1E0:41:50:32:18:50 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:55:0%:99:1E0:43:55:28:27:56 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:36 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:45 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:20 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:37:1:1:0:42:2.38%:66:5E-1:43:41:26:15:43 0/0:0:0:0:0:73:0%:99:1E0:40:73:36:37:73 0/0:0:0:0:0:49:0%:93:1E0:46:49:29:20:49 0/0:39:1:0:1:46:2.17%:73:5E-1:45:45:22:23:46 0/0:60:1:1:0:46:2.17%:73:5E-1:41:45:25:20:46 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:43:0%:82:1E0:42:43:27:16:44 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:36 0/0:0:0:0:0:52:0%:96:1E0:41:52:27:25:53 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 MTB_anc 690248 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|mce2C_Rv0591|gene606|transcript|Transcript_gene606|Coding|1/1|c.1190A>C|p.Asn397Thr|1190/1446|1190/1446|397/481||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.690248A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.690248A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:20:14:6:21:95.24%:99:4.0873E-11:27:1:1:0:21 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:27:12:15:29:93.1%:99:3.7915E-15:26:1:1:0:31 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:37:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:34:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:35:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:34:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:30:12:18:31:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:41:23:13:10:24:95.83%:99:7.7525E-13:38:1:0:1:25 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:35:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:35:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:34:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:36:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:34:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:29:17:12:30:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 MTB_anc 690450 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|mce2C_Rv0591|gene606|transcript|Transcript_gene606|Coding|1/1|c.1392C>A|p.Ala464Ala|1392/1446|1392/1446|464/481||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.690450C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.690450C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:12:16:29:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:15:7:8:16:93.75%:75:2.8282E-8:34:1:0:1:17 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:44:20:24:45:97.78%:99:4.4304E-25:60:1:0:1:46 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:55:32:23:56:98.21%:99:1.4593E-31:37:1:1:0:58 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:61:29:32:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 MTB_anc 691887 . G GC . PASS AC=261;AF=0.870;AN=300;ANN=GC|frameshift_variant|HIGH|mce2D_Rv0592|gene607|transcript|Transcript_gene607|Coding|1/1|c.1394dupC|p.Pro466fs|1395/1527|1395/1527|465/508||INFO_REALIGN_3_PRIME,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.691887_691888insC||||||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.691887_691888insC||||||;LOF=(mce2D_Rv0592|gene607|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:54:33:21:56:94.74%:99:2.2097E-29:33:3:1:2:57 1/1:47:18:10:8:19:94.74%:92:5.6585E-10:60:1:0:1:19 1/1:42:43:20:23:44:93.48%:99:4.485E-23:43:3:2:1:46 1/1:45:24:17:7:24:96%:99:2.0568E-13:60:1:0:1:25 0/1:44:32:19:13:36:82.05%:99:1.9666E-15:38:7:4:3:39 1/1:44:31:21:10:32:93.94%:99:1.8007E-17:38:1:0:1:32 0/1:46:33:16:17:37:86.84%:99:1.3966E-16:40:5:2:3:38 1/1:40:30:16:14:30:93.75%:99:3.0612E-16:34:2:1:1:32 0/1:44:29:15:14:34:82.86%:99:2.0235E-14:55:5:1:4:35 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/1:50:24:15:9:28:82.76%:99:9.2544E-12:44:5:2:3:29 1/1:41:55:30:25:54:96.49%:99:1.1048E-30:36:2:1:1:57 0/1:45:21:10:11:23:84%:99:9.0704E-11:52:3:1:2:25 1/1:42:56:34:22:57:96.55%:99:3.7452E-32:32:1:0:1:58 0/1:43:25:15:10:28:89.29%:99:2.0853E-13:47:2:1:1:28 1/1:48:41:24:17:44:91.11%:99:2.0407E-21:53:4:2:2:46 0/1:44:31:19:12:35:86.11%:99:1.6935E-15:46:5:3:2:36 1/1:42:26:9:17:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:7:13:22:90.91%:98:1.3117E-10:33:2:1:1:22 1/1:44:29:18:11:30:93.55%:99:1.1344E-15:36:2:2:0:31 1/1:40:27:14:13:28:96.43%:99:3.7915E-15:34:1:1:0:28 1/1:42:53:25:28:53:96.36%:99:1.6199E-29:35:2:2:0:55 1/1:50:30:17:13:32:93.75%:99:3.0612E-16:37:2:0:2:32 1/1:43:48:20:28:49:97.96%:99:1.9625E-27:32:1:1:0:49 1/1:44:28:14:14:31:90.32%:99:1.2857E-14:41:3:2:1:31 1/1:51:15:8:7:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:43:20:12:8:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:45:20:10:10:22:90.91%:98:1.3117E-10:46:2:0:2:22 1/1:49:33:16:17:34:97.06%:99:1.2301E-18:32:1:0:1:34 1/1:43:27:15:12:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:34:15:19:36:94.44%:99:1.5887E-18:36:2:0:2:36 1/1:42:27:15:12:30:90%:99:4.6134E-14:44:3:3:0:31 0/1:50:23:13:10:27:85.19%:99:1.6161E-11:36:4:1:3:27 1/1:44:25:20:5:26:96.15%:99:5.4444E-14:36:1:1:0:26 1/1:48:29:16:13:32:90.62%:99:3.5714E-15:52:3:1:2:32 1/1:45:34:19:15:35:97.14%:99:3.2089E-19:60:1:0:1:35 1/1:42:25:10:15:26:92.59%:99:2.0853E-13:49:2:1:1:27 1/1:45:61:30:31:60:98.39%:99:4.1425E-35:29:1:1:0:62 1/1:46:50:22:28:52:94.34%:99:4.4193E-27:43:3:1:2:53 0/1:43:37:20:17:41:88.1%:99:3.5075E-19:32:4:2:2:42 0/1:42:26:10:16:29:89.66%:99:1.6496E-13:43:3:2:1:30 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 0/1:42:24:13:11:26:88.89%:99:7.6222E-13:33:2:1:1:27 0/1:38:18:11:7:22:81.82%:87:1.6758E-9:37:2:1:1:22 0/1:41:25:13:12:28:83.33%:99:1.3609E-12:41:4:0:4:30 1/1:44:31:14:17:33:91.18%:99:8.2416E-17:37:2:2:0:34 0/1:44:27:15:12:32:79.41%:99:4.5192E-13:49:6:1:5:34 1/1:41:36:19:17:38:94.74%:99:1.1316E-19:33:2:1:1:38 1/1:44:45:21:24:50:90%:99:3.448E-23:36:5:3:2:51 0/1:46:36:12:24:41:85.71%:99:7.3092E-18:33:6:4:2:42 0/1:47:11:3:8:13:84.62%:49:1.0096E-5:46:2:0:2:14 1/1:42:39:22:17:43:90.7%:99:8.4519E-21:52:3:3:0:43 1/1:45:26:16:10:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:22:13:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:26:16:10:27:96.3%:99:1.4382E-14:33:1:1:0:27 1/1:42:47:26:21:49:95.92%:99:5.0044E-26:34:2:2:0:49 1/1:41:37:23:14:40:92.5%:99:1.1479E-19:44:3:1:2:40 1/1:43:29:12:17:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:21:16:40:92.5%:99:3.0128E-20:43:2:0:2:40 0/1:49:26:17:9:28:89.66%:99:1.6496E-13:41:3:2:1:29 0/1:46:33:22:11:37:89.19%:99:5.7997E-17:34:4:1:3:37 1/1:40:38:20:18:38:97.44%:99:1.4697E-21:39:1:0:1:40 0/1:41:31:17:14:36:83.78%:99:1.6935E-15:38:5:3:2:37 1/1:47:24:11:13:25:96%:99:3.101E-14:0:0:0:0:25 0/1:40:30:13:17:35:81.08%:99:2.5943E-15:42:4:2:2:36 0/1:44:36:22:14:46:78.26%:99:1.5048E-17:37:7:7:0:46 0/1:41:26:10:16:30:86.67%:99:3.9214E-13:40:4:3:1:30 1/1:42:46:29:17:49:92%:99:8.6743E-25:37:3:1:2:50 1/1:50:17:7:10:18:94.44%:86:2.0936E-9:35:1:1:0:18 0/1:51:14:7:7:18:77.78%:60:8.0605E-7:42:4:2:2:18 0/1:44:25:13:12:29:83.33%:99:1.3609E-12:40:4:2:2:30 1/1:53:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:21:9:12:23:91.3%:99:3.6437E-11:34:2:0:2:23 1/1:47:32:16:16:35:91.43%:99:7.5196E-17:37:3:2:1:35 1/1:43:33:16:17:33:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:49:40:23:17:43:90.91%:99:5.6346E-22:34:2:2:0:43 0/1:41:31:16:15:37:79.49%:99:3.4914E-15:44:6:3:3:39 1/1:44:32:16:16:33:96.97%:99:4.7095E-18:35:1:0:1:33 1/1:40:27:13:14:29:90%:99:4.6134E-14:47:3:2:1:30 1/1:39:26:13:13:26:96.3%:99:1.4382E-14:33:1:0:1:27 0/1:46:21:13:8:24:87.5%:99:3.6437E-11:47:2:1:1:24 1/1:43:49:25:24:50:96.08%:99:3.4484E-27:33:2:0:2:51 1/1:44:34:17:17:35:91.89%:99:1.5887E-18:37:2:1:1:37 1/1:44:26:10:16:28:92.86%:99:5.6872E-14:36:2:2:0:28 1/1:40:29:19:10:30:93.55%:99:1.1344E-15:34:2:0:2:31 1/1:42:28:16:12:28:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:43:21:11:10:22:95.45%:99:1.8578E-12:0:0:0:0:22 0/1:48:21:7:14:24:87.5%:99:9.0704E-11:34:3:3:0:24 1/1:46:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:23:10:13:24:95.83%:99:7.7525E-13:30:1:1:0:24 0/1:44:24:12:12:27:88.89%:99:2.0853E-12:33:3:2:1:27 1/1:48:20:10:10:21:95.24%:99:4.0873E-11:39:1:0:1:21 1/1:40:53:28:25:53:96.36%:99:1.5943E-31:0:0:0:0:55 0/1:45:25:13:12:29:86.21%:99:1.3609E-12:47:4:0:4:29 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:22:15:7:23:91.67%:99:1.0078E-11:46:2:1:1:24 1/1:34:19:11:8:17:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:32:15:17:32:94.12%:99:2.2142E-17:35:2:2:0:34 1/1:40:30:18:12:33:90.91%:99:9.89E-16:35:3:2:1:34 0/1:43:26:19:7:29:89.66%:99:5.6872E-14:36:2:2:0:29 0/1:40:26:15:11:30:83.87%:99:8.0999E-13:40:5:4:1:31 0/1:42:32:22:10:38:82.05%:99:4.8717E-16:32:5:3:2:39 1/1:40:24:15:9:23:100%:99:3.101E-14:0:0:0:0:24 1/1:37:19:11:8:20:95%:98:1.5234E-10:32:1:1:0:20 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:15:8:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:18:14:34:91.43%:99:4.7095E-18:31:1:0:1:35 1/1:44:34:19:15:36:94.44%:99:1.5887E-18:33:2:1:1:36 1/1:42:28:18:10:31:90.32%:99:4.194E-15:48:2:2:0:31 1/1:43:25:14:11:27:92.59%:99:5.4444E-14:60:1:0:1:27 1/1:44:25:8:17:27:92.59%:99:5.4444E-14:39:1:1:0:27 1/1:43:25:13:12:26:92.59%:99:5.4444E-14:35:1:1:0:28 1/1:45:23:14:9:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:41:29:20:9:31:93.55%:99:1.1344E-15:37:2:2:0:31 1/1:39:48:23:25:46:97.96%:99:1.9625E-27:32:1:0:1:49 1/1:41:34:19:15:33:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:43:27:17:10:28:93.1%:99:1.5465E-14:33:2:2:0:29 0/1:39:25:15:10:29:80.65%:99:2.745E-12:33:5:2:3:31 0/1:41:49:27:22:56:84.48%:99:1.4165E-24:35:7:3:4:58 1/1:39:53:28:25:56:92.98%:99:3.3697E-28:40:4:2:2:57 1/1:39:27:19:8:28:96.43%:99:3.7915E-15:35:1:0:1:28 1/1:38:18:9:9:18:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:37:48:21:27:46:97.96%:99:1.9625E-27:34:1:0:1:50 0/1:43:25:9:16:27:89.29%:99:5.8768E-13:34:3:2:1:28 0/1:41:39:15:24:43:88.64%:99:7.2647E-20:32:5:4:1:44 1/1:35:31:14:17:29:93.94%:99:8.2416E-17:31:2:0:2:33 1/1:38:32:18:14:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:33:19:14:33:97.06%:99:1.2301E-18:33:1:0:1:34 0/1:40:25:8:17:29:86.21%:99:2.0853E-13:37:2:2:0:30 1/1:38:38:17:21:37:95%:99:1.4697E-21:38:1:1:0:40 1/1:36:48:24:24:49:92.31%:99:6.2071E-26:36:3:2:1:52 1/1:40:38:19:19:40:92.68%:99:8.0088E-21:35:2:2:0:41 1/1:36:34:20:14:32:97.14%:99:3.2089E-19:33:1:1:0:35 1/1:38:34:13:21:35:91.89%:99:1.5887E-18:35:2:1:1:37 0/1:41:31:17:14:35:86.11%:99:1.6935E-15:60:5:2:3:36 1/1:36:56:31:25:58:91.8%:99:1.5528E-30:43:3:1:2:60 1/1:42:39:19:20:40:95.12%:99:2.1258E-21:34:2:2:0:41 1/1:41:46:22:24:50:92%:99:3.1346E-24:41:4:1:3:50 1/1:41:47:24:23:47:95.92%:99:7.6145E-27:37:1:0:1:49 0/1:44:35:15:20:39:89.74%:99:1.5466E-18:34:3:0:3:39 1/1:41:33:18:15:34:94.29%:99:5.9366E-18:31:2:1:1:35 1/1:41:29:12:17:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:40:13:27:44:90.91%:99:2.287E-21:35:3:1:2:44 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:26:17:9:28:92.86%:99:5.6872E-14:35:2:2:0:28 1/1:42:36:16:20:40:90%:99:4.2179E-19:33:3:1:2:40 1/1:41:45:22:23:50:90%:99:3.448E-23:40:5:4:1:50 1/1:41:44:27:17:47:91.67%:99:2.7459E-24:34:2:0:2:48 MTB_anc 693618 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|mce2F_Rv0594|gene609|transcript|Transcript_gene609|Coding|1/1|c.382A>G|p.Thr128Ala|382/1551|382/1551|128/516||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.693618A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.693618A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:34 0/0:0:0:0:0:18:0%:32:1E0:49:18:7:11:18 0/0:0:0:0:0:49:0%:93:1E0:45:49:29:20:49 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:21 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:38 0/0:0:0:0:0:35:0%:67:1E0:51:35:23:12:35 0/0:0:0:0:0:18:0%:32:1E0:48:18:12:6:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:16:0%:29:1E0:48:16:4:12:16 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:51 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:57:0%:99:1E0:40:57:27:30:60 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:36 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:8:21:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:38 0/0:0:0:0:0:51:0%:97:1E0:44:51:27:24:51 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:41 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:34 0/0:0:0:0:0:37:0%:70:1E0:46:37:24:13:37 0/0:0:0:0:0:20:0%:36:1E0:45:20:15:5:21 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:0:0:0:0:22:0%:40:1E0:48:22:16:6:22 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:37 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:15 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:18:0%:32:1E0:43:18:5:13:20 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:39 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:46:0%:85:1E0:46:46:25:21:47 0/0:0:0:0:0:52:0%:96:1E0:45:52:27:25:54 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:20:0%:36:1E0:50:20:13:7:20 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:20 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:34 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:50:39:25:14:40 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:38:1:0:1:29:3.45%:45:5E-1:43:28:13:15:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:25 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:16:6:23 0/0:0:0:0:0:41:0%:78:1E0:45:41:27:14:42 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:34 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:37:27:7:20:28 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:20 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:20 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:34 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:29:0%:55:1E0:36:29:11:18:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:38 0/0:0:0:0:0:33:0%:63:1E0:37:33:9:24:35 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:25 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:34 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:46 0/0:0:0:0:0:51:0%:97:1E0:40:51:19:32:54 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:31 0/0:33:1:1:0:21:4.76%:31:5E-1:40:20:10:10:21 0/0:0:0:0:0:37:0%:70:1E0:37:37:14:23:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:36:0%:66:1E0:36:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:34:32:14:18:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:36 0/0:0:0:0:0:35:0%:67:1E0:38:35:13:22:35 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:33 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:41:26:7:19:28 0/0:0:0:0:0:20:0%:36:1E0:38:20:13:7:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:46:0%:85:1E0:38:46:14:32:49 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:48 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:41 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:48 0/0:0:0:0:0:40:0%:74:1E0:40:40:25:15:41 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:36 MTB_anc 694265 . AC A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|frameshift_variant|HIGH|mce2F_Rv0594|gene609|transcript|Transcript_gene609|Coding|1/1|c.1032delC|p.Lys345fs|1032/1551|1032/1551|344/516||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.694266delC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.694266delC||||||;HET=0;LOF=(mce2F_Rv0594|gene609|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:23 0/0:0:0:0:0:16:0%:29:1E0:40:16:5:11:16 0/0:0:0:0:0:39:0%:74:1E0:37:39:13:26:39 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:19 0/0:0:0:0:0:24:0%:44:1E0:37:24:6:18:24 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:30 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:29 0/0:0:0:0:0:22:0%:40:1E0:35:22:5:17:24 0/0:0:0:0:0:33:0%:63:1E0:37:33:14:19:34 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:8:29:38 0/0:0:0:0:0:31:0%:59:1E0:38:31:11:20:33 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:19 0/0:0:0:0:0:49:0%:93:1E0:36:49:17:32:50 0/0:0:0:0:0:14:0%:25:1E0:38:14:3:11:14 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:26 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:21 0/0:0:0:0:0:31:0%:59:1E0:38:31:8:23:32 0/0:0:0:0:0:20:0%:36:1E0:37:20:5:15:20 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:38:24:6:18:25 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:27 0/0:0:0:0:0:14:0%:25:1E0:35:14:3:11:14 0/0:33:1:0:1:30:3.33%:44:5E-1:36:29:8:21:30 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:23 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:17 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:25 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:14 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:25 0/0:0:0:0:0:33:0%:63:1E0:36:33:11:22:34 0/0:0:0:0:0:31:0%:59:1E0:37:31:9:22:33 0/0:0:0:0:0:23:0%:44:1E0:35:23:9:14:24 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:25 0/0:0:0:0:0:28:0%:51:1E0:36:28:9:19:29 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:19 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:19 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:27 0/0:0:0:0:0:58:0%:99:1E0:37:58:18:40:62 0/0:0:0:0:0:33:0%:63:1E0:38:33:9:24:34 0/0:0:0:0:0:36:0%:66:1E0:36:36:9:27:40 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:25 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:26 0/0:0:0:0:0:18:0%:32:1E0:36:18:6:12:18 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:17 0/0:0:0:0:0:22:0%:40:1E0:36:22:7:15:22 0/0:0:0:0:0:32:0%:59:1E0:36:32:12:20:34 0/0:0:0:0:0:29:0%:55:1E0:38:29:6:23:30 0/0:0:0:0:0:44:0%:81:1E0:37:44:11:33:44 0/0:0:0:0:0:36:0%:66:1E0:36:36:12:24:36 0/0:0:0:0:0:35:0%:67:1E0:38:35:10:25:37 0/0:0:0:0:0:18:0%:32:1E0:37:18:4:14:18 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:29 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:17 0/0:0:0:0:0:28:0%:51:1E0:38:28:8:20:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:26 0/0:0:0:0:0:41:0%:78:1E0:37:41:10:31:41 0/0:0:0:0:0:28:0%:51:1E0:37:28:6:22:29 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:13 0/0:0:0:0:0:35:0%:67:1E0:36:35:10:25:35 0/0:0:0:0:0:33:0%:63:1E0:36:33:8:25:35 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:34 0/0:33:1:0:1:30:3.33%:44:5E-1:38:29:8:21:31 0/0:0:0:0:0:38:0%:70:1E0:37:38:11:27:38 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:25 0/0:0:0:0:0:37:0%:70:1E0:37:37:16:21:37 0/0:0:0:0:0:53:0%:99:1E0:37:53:21:32:53 0/0:0:0:0:0:29:0%:55:1E0:36:29:9:20:29 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:31 0/0:0:0:0:0:14:0%:25:1E0:38:14:4:10:16 0/0:0:0:0:0:14:0%:25:1E0:39:14:3:11:14 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:22 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:26 0/0:0:0:0:0:17:0%:33:1E0:38:17:3:14:18 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:24 0/0:0:0:0:0:22:0%:40:1E0:38:22:5:17:23 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:24 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:30:0%:55:1E0:36:30:11:19:30 0/0:0:0:0:0:14:0%:25:1E0:36:14:7:7:17 0/0:0:0:0:0:31:0%:59:1E0:37:31:9:22:31 0/0:0:0:0:0:35:0%:67:1E0:37:35:12:23:36 0/0:0:0:0:0:38:0%:70:1E0:37:38:8:30:39 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:26 0/0:0:0:0:0:31:0%:59:1E0:37:31:10:21:31 0/0:0:0:0:0:33:0%:63:1E0:37:33:10:23:33 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:25 0/0:0:0:0:0:20:0%:36:1E0:41:20:4:16:21 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:29 0/0:0:0:0:0:19:0%:37:1E0:37:19:3:16:19 0/0:0:0:0:0:32:0%:59:1E0:38:32:8:24:33 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:21 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:35:22:8:14:22 0/0:0:0:0:0:38:0%:70:1E0:36:38:9:29:38 0/0:0:0:0:0:21:0%:40:1E0:36:21:4:17:21 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:21 0/0:0:0:0:0:20:0%:36:1E0:37:20:6:14:20 0/0:0:0:0:0:19:0%:37:1E0:36:19:8:11:19 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:23 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:3:21:25 0/0:0:0:0:0:29:0%:55:1E0:36:29:9:20:29 0/0:0:0:0:0:20:0%:36:1E0:37:20:5:15:21 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:25 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:27 0/0:0:0:0:0:34:0%:62:1E0:37:34:11:23:34 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:25 0/0:0:0:0:0:24:0%:44:1E0:38:24:4:20:24 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:25 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:19 0/0:0:0:0:0:32:0%:59:1E0:36:32:10:22:33 0/0:0:0:0:0:38:0%:70:1E0:35:38:7:31:38 0/0:0:0:0:0:34:0%:62:1E0:37:34:6:28:36 0/0:0:0:0:0:25:0%:48:1E0:34:25:6:19:26 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:16 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:14 0/0:0:0:0:0:44:0%:81:1E0:37:44:14:30:46 0/0:0:0:0:0:35:0%:67:1E0:36:35:6:29:35 0/0:0:0:0:0:20:0%:36:1E0:35:20:10:10:21 0/0:0:0:0:0:30:0%:55:1E0:36:30:10:20:34 0/0:0:0:0:0:26:0%:47:1E0:36:26:7:19:27 0/0:0:0:0:0:29:0%:55:1E0:36:29:3:26:29 0/0:0:0:0:0:38:0%:70:1E0:36:38:9:29:38 0/0:0:0:0:0:30:0%:55:1E0:37:30:10:20:32 0/0:0:0:0:0:30:0%:55:1E0:35:30:7:23:32 0/0:0:0:0:0:28:0%:51:1E0:36:28:6:22:29 0/0:0:0:0:0:32:0%:59:1E0:36:32:10:22:33 0/0:0:0:0:0:37:0%:70:1E0:36:37:7:30:38 0/0:0:0:0:0:28:0%:51:1E0:35:28:8:20:29 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:23 0/0:0:0:0:0:25:0%:48:1E0:37:25:6:19:25 0/0:0:0:0:0:29:0%:55:1E0:35:29:9:20:30 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:21 0/0:0:0:0:0:26:0%:47:1E0:36:26:4:22:27 0/0:0:0:0:0:26:0%:47:1E0:36:26:6:20:26 0/0:0:0:0:0:26:0%:47:1E0:38:26:6:20:27 0/0:0:0:0:0:37:0%:70:1E0:36:37:14:23:37 0/0:0:0:0:0:28:0%:51:1E0:35:28:6:22:28 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:22 0/0:0:0:0:0:30:0%:55:1E0:36:30:11:19:30 1/1:36:28:5:23:29:96.55%:99:9.9776E-16:33:1:0:1:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:26 0/0:0:0:0:0:21:0%:40:1E0:37:21:4:17:22 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:26 0/0:0:0:0:0:35:0%:67:1E0:36:35:13:22:37 0/0:0:0:0:0:33:0%:63:1E0:37:33:11:22:34 0/0:0:0:0:0:19:0%:37:1E0:36:19:3:16:19 MTB_anc 700776 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|lpqO_Rv0604|gene619|transcript|Transcript_gene619|Coding|1/1|c.538C>T|p.Pro180Ser|538/951|538/951|180/316||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.700776C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.700776C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:53:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:36:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:31:6:25:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:51:14:37:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:35:20:15:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:36:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:37:28:10:18:29:96.55%:99:9.9776E-16:50:1:1:0:30 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 703560 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|vapC28_Rv0609|gene623|transcript|Transcript_gene623|Coding|1/1|c.75C>T|p.Leu25Leu|75/402|75/402|25/133||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.703560C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.703560C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:49 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:38:1:0:1:46:2.17%:73:5E-1:42:45:15:30:47 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:39 0/0:0:0:0:0:36:0%:66:1E0:50:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:58:0%:99:1E0:42:58:32:26:59 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:63:0%:99:1E0:42:63:34:29:63 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:52:0%:96:1E0:44:52:24:28:53 0/0:39:1:1:0:37:2.7%:59:5E-1:45:36:23:13:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:38 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:18 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:41 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:30 0/0:0:0:0:0:41:0%:78:1E0:48:41:20:21:41 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 0/0:0:0:0:0:47:0%:89:1E0:38:47:32:15:47 0/0:0:0:0:0:58:0%:99:1E0:46:58:31:27:58 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:51:0%:97:1E0:42:51:29:22:53 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 1/1:42:41:22:19:43:95.35%:99:1.4915E-22:60:2:1:1:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:41 0/0:0:0:0:0:47:0%:89:1E0:40:47:26:21:49 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:44 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:71:0%:99:1E0:43:71:27:44:71 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:42:0%:77:1E0:40:42:29:13:43 0/0:0:0:0:0:44:0%:81:1E0:46:44:20:24:45 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:39 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:42 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:40 0/0:0:0:0:0:51:0%:97:1E0:46:51:25:26:51 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:27:16:43 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:25 0/0:0:0:0:0:34:0%:62:1E0:49:34:22:12:34 0/0:0:0:0:0:13:0%:25:1E0:47:13:6:7:13 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:51:0%:97:1E0:41:51:22:29:51 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:18:0%:32:1E0:47:18:13:5:19 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:34 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:52 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:39 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:40 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:15:0%:29:1E0:50:15:8:7:15 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:51:30:14:16:31 0/0:0:0:0:0:53:0%:99:1E0:40:53:31:22:53 0/0:35:1:1:0:40:2.5%:62:5E-1:45:39:16:23:40 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:43 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:33 0/0:0:0:0:0:37:0%:70:1E0:40:37:11:26:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:35 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:36 0/0:0:0:0:0:26:0%:47:1E0:40:26:21:5:27 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:26 0/0:60:1:0:1:27:3.7%:41:5E-1:41:26:15:11:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:30 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:40 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:43 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:41 0/0:0:0:0:0:21:0%:40:1E0:37:21:14:7:22 0/0:0:0:0:0:64:0%:99:1E0:41:64:39:25:68 0/0:0:0:0:0:57:0%:99:1E0:42:57:25:32:57 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 0/0:0:0:0:0:46:0%:85:1E0:37:46:25:21:47 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:40:0%:74:1E0:40:40:24:16:40 0/0:0:0:0:0:51:0%:97:1E0:35:51:29:22:53 0/0:0:0:0:0:41:0%:78:1E0:39:41:24:17:42 0/0:0:0:0:0:35:0%:67:1E0:36:35:22:13:36 0/0:0:0:0:0:47:0%:89:1E0:37:47:24:23:49 0/0:0:0:0:0:36:0%:66:1E0:38:36:21:15:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:28:18:48 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:34 0/0:0:0:0:0:28:0%:51:1E0:37:28:15:13:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:32 0/0:0:0:0:0:56:0%:99:1E0:37:56:31:25:57 0/0:0:0:0:0:41:0%:78:1E0:40:41:28:13:42 0/0:0:0:0:0:51:0%:97:1E0:40:51:25:26:51 0/0:39:1:0:1:47:2.13%:77:5E-1:38:46:29:17:48 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:50 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:37 MTB_anc 705602 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0610c_Rv0610c|gene626|transcript|Transcript_gene626|Coding|1/1|c.308G>A|p.Ser103Asn|308/1158|308/1158|103/385||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.705602C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.705602C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:54 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 713310 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|galK_Rv0620|gene635|transcript|Transcript_gene635|Coding|1/1|c.595C>T|p.Arg199Cys|595/1092|595/1092|199/363||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.713310C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.713310C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:53:36:17:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:51:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:46:34:19:15:35:97.14%:99:3.2089E-19:38:1:1:0:35 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:60:34:26:61:98.36%:99:1.6176E-34:38:1:1:0:61 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:12:9:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:44:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:47:32:15:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:11:17:29:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:53:37:16:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 715266 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|stop_gained&splice_region_variant|HIGH|Rv0621_Rv0621|gene636|transcript|Transcript_gene636|Coding|1/1|c.1065G>A|p.Trp355*|1065/1065|1065/1065|355/354||WARNING_TRANSCRIPT_NO_STOP_CODON,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.715266G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.715266G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:51:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:61:25:36:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:54:18:36:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:50:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:51:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:52:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:71:36:35:71:100%:99:2.6835E-42:0:0:0:0:72 1/1:45:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 MTB_anc 717588 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0625c_Rv0625c|gene640|transcript|Transcript_gene640|Coding|1/1|c.306C>T|p.Val102Val|306/741|306/741|102/246||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.717588G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.717588G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:48:33:15:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:30:12:18:31:96.77%:99:6.8754E-17:37:1:0:1:31 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:63:40:23:63:100%:99:1.657E-37:0:0:0:0:63 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:37:22:15:38:97.37%:99:5.6582E-21:38:1:1:0:38 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 723746 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|recB_Rv0630c|gene645|transcript|Transcript_gene645|Coding|1/1|c.1268C>T|p.Ala423Val|1268/3285|1268/3285|423/1094||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.723746G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.723746G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 1/1:51:17:10:7:18:94.44%:86:2.0936E-9:60:1:1:0:19 0/0:0:0:0:0:48:0%:89:1E0:45:48:20:28:48 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:14:25:39 0/0:0:0:0:0:19:0%:37:1E0:44:19:13:6:19 0/0:37:1:0:1:40:2.5%:62:5E-1:47:39:17:22:40 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:0:0:0:0:30:0%:55:1E0:50:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:9:0%:18:1E0:47:9:4:5:9 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:19 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:16 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:47 0/0:0:0:0:0:31:0%:59:1E0:46:31:11:20:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:24:11:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:53:0%:99:1E0:43:53:32:21:54 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:56:0%:99:1E0:44:56:27:29:57 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:16 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:47:0%:89:1E0:41:47:16:31:47 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:49 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:17:0%:33:1E0:46:17:6:11:17 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:11:0%:22:1E0:48:11:3:8:12 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:45 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:52:0%:96:1E0:45:52:24:28:54 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:28:14:43 0/0:0:0:0:0:38:0%:70:1E0:42:38:14:24:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:49 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:18:0%:32:1E0:48:18:12:6:18 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:31 0/0:0:0:0:0:15:0%:29:1E0:53:15:8:7:15 0/0:0:0:0:0:37:0%:70:1E0:48:37:15:22:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:29 0/0:0:0:0:0:22:0%:40:1E0:50:22:14:8:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:32 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:60:1:1:0:30:3.33%:44:5E-1:40:29:19:10:31 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:33 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:16:0%:29:1E0:49:16:9:7:16 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:38 0/0:0:0:0:0:17:0%:33:1E0:50:17:10:7:17 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:37:1:1:0:29:3.45%:45:5E-1:35:28:15:13:30 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:17 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:19 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:25 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:51 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:45 0/0:0:0:0:0:16:0%:29:1E0:42:16:5:11:17 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:23 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 0/0:0:0:0:0:20:0%:36:1E0:36:20:7:13:20 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:42 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:37:30:17:13:32 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:48 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:44 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:23 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:15:0%:29:1E0:41:15:10:5:15 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 MTB_anc 731786 . C A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|rpmG2_Rv0634B|gene653|transcript|Transcript_gene653|Coding|1/1|c.75C>A|p.Thr25Thr|75/168|75/168|25/55||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.731786C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.731786C>A||||||;HOM=0;NC=0;set=filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:34:2:0:2:25:8%:31:2.449E-1:37:23:20:3:28 0/0:27:1:0:1:18:5.56%:24:5E-1:39:17:10:7:18 0/0:33:3:0:3:35:8.57%:40:1.1957E-1:38:32:24:8:40 0/0:32:5:0:5:25:20%:17:2.5076E-2:37:20:13:7:27 0/0:0:0:0:0:17:0%:33:1E0:38:17:13:4:19 0/0:34:3:0:3:19:15.79%:17:1.1486E-1:37:16:13:3:20 0/0:31:2:0:2:31:6.45%:40:2.459E-1:38:29:21:8:36 0/0:30:4:0:4:18:22.22%:10:5.1948E-2:38:14:9:5:19 0/0:31:4:0:4:28:14.29%:23:5.5746E-2:39:24:15:9:31 0/0:32:2:0:2:26:7.69%:30:2.451E-1:37:24:19:5:27 0/0:34:3:0:3:32:9.38%:34:1.1905E-1:39:29:16:13:35 0/0:32:3:0:3:27:11.11%:28:1.1792E-1:39:24:19:5:28 0/0:29:4:0:4:26:15.38%:20:5.5222E-2:38:22:15:7:27 0/0:30:2:0:2:27:7.41%:34:2.4528E-1:37:25:18:7:28 0/0:34:1:0:1:29:3.45%:45:5E-1:38:28:19:9:31 0/0:32:6:1:5:31:19.35%:20:1.1977E-2:38:25:17:8:31 0/0:37:1:0:1:21:4.76%:31:5E-1:38:20:14:6:22 0/0:33:2:0:2:13:15.38%:13:2.4E-1:37:11:8:3:14 0/0:32:2:0:2:22:9.09%:24:2.4419E-1:37:20:13:7:26 0/0:32:2:0:2:21:9.52%:25:2.439E-1:37:19:12:7:21 0/0:34:4:0:4:27:14.81%:23:5.5494E-2:37:23:19:4:29 0/0:32:4:0:4:46:8.7%:49:5.8402E-2:37:42:29:13:48 0/0:33:5:1:4:24:20.83%:14:2.4823E-2:38:19:16:3:25 0/0:32:6:0:6:33:18.18%:23:1.219E-2:38:27:20:7:39 0/0:30:2:0:2:16:12.5%:15:2.4194E-1:37:14:12:2:18 0/0:30:1:0:1:16:6.25%:21:5E-1:42:15:10:5:20 0/0:30:1:0:1:21:4.76%:31:5E-1:37:20:16:4:22 0/0:40:3:1:2:13:23.08%:9:1.1E-1:36:10:6:4:15 0/0:0:0:0:0:17:0%:33:1E0:38:17:15:2:22 0/0:32:1:0:1:18:5.56%:24:5E-1:37:16:13:3:22 0/0:30:2:0:2:21:9.52%:25:2.439E-1:38:19:14:5:25 0/0:31:1:0:1:13:7.69%:18:5E-1:40:12:8:4:14 0/0:31:3:0:3:31:9.68%:34:1.1885E-1:39:28:19:9:31 0/0:30:2:0:2:24:8.33%:27:2.4468E-1:37:22:17:5:25 0/0:32:2:0:2:35:5.71%:47:2.4638E-1:37:33:26:7:38 0/0:30:1:0:1:28:3.57%:41:5E-1:37:27:19:8:30 0/0:30:2:0:2:24:8.33%:27:2.4468E-1:37:22:14:8:29 0/0:30:3:0:3:48:6.25%:59:1.2105E-1:38:45:34:11:53 0/0:30:1:0:1:32:3.12%:48:5E-1:37:31:22:9:33 0/0:30:2:0:2:30:6.67%:37:2.4576E-1:37:28:18:10:33 0/0:34:1:0:1:16:6.25%:21:5E-1:37:15:10:5:19 0/0:31:2:0:2:39:5.13%:50:2.4667E-1:38:36:25:11:45 0/0:33:2:0:2:15:13.33%:16:2.4138E-1:37:13:9:4:15 0/0:30:2:0:2:19:10.53%:21:2.4324E-1:37:17:14:3:21 0/0:31:1:0:1:10:10%:11:5E-1:36:9:6:3:12 0/0:31:6:0:6:21:28.57%:9:1.0344E-2:38:15:11:4:23 0/0:34:1:0:1:17:5.88%:24:5E-1:39:16:9:7:17 0/0:31:1:0:1:21:4.76%:31:5E-1:38:20:15:5:24 0/0:30:4:0:4:28:14.29%:23:5.5746E-2:37:24:20:4:34 0/0:31:4:0:4:41:9.76%:44:5.79E-2:38:37:28:9:43 0/0:32:3:0:3:25:12%:25:1.1735E-1:39:22:11:11:27 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:19 0/0:32:2:0:2:18:11.11%:18:2.4286E-1:37:16:7:9:18 0/0:34:2:0:2:27:7.14%:34:2.4528E-1:37:25:20:5:30 0/0:33:2:0:2:14:14.29%:12:2.4074E-1:39:12:8:4:18 0/0:31:5:0:5:34:14.71%:27:2.6693E-2:38:29:20:9:36 0/0:34:4:0:4:16:25%:8:5.0612E-2:37:12:9:3:19 0/0:29:3:0:3:21:14.29%:19:1.1585E-1:37:18:15:3:23 0/0:31:4:0:4:23:17.39%:18:5.4264E-2:38:19:14:5:26 0/0:33:4:0:4:38:10.53%:37:5.7534E-2:37:34:25:9:40 0/0:30:2:0:2:22:9.09%:24:2.4419E-1:37:20:16:4:23 0/0:32:2:0:2:33:6.06%:44:2.4615E-1:38:31:24:7:36 0/0:30:5:0:5:28:17.86%:19:2.5729E-2:37:23:18:5:30 0/0:33:6:0:6:40:15%:30:1.2773E-2:39:34:26:8:43 0/0:30:2:0:2:29:6.9%:37:2.4561E-1:37:27:21:6:30 0/0:34:5:0:5:51:9.8%:53:2.8203E-2:37:46:32:14:53 0/0:33:4:0:4:24:16.67%:18:5.461E-2:37:20:17:3:25 0/0:34:3:0:3:35:8.57%:40:1.1957E-1:38:32:22:10:36 0/0:32:2:0:2:15:13.33%:16:2.4138E-1:37:13:11:2:17 0/0:35:2:0:2:22:9.09%:24:2.4419E-1:38:20:16:4:24 0/0:31:3:0:3:19:15.79%:17:1.1486E-1:36:16:12:4:24 0/0:32:4:0:4:40:10%:40:5.7784E-2:38:36:26:10:41 0/0:31:2:0:2:18:11.11%:18:2.4286E-1:39:16:12:4:20 0/0:30:5:0:5:35:14.29%:30:2.6822E-2:37:30:21:9:36 0/0:36:1:0:1:26:3.85%:38:5E-1:37:25:18:7:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:13:8:23 0/0:31:1:0:1:19:5.26%:28:5E-1:37:18:14:4:21 0/0:35:2:0:2:30:6.67%:37:2.4576E-1:39:28:17:11:35 0/0:37:1:0:1:25:4%:38:5E-1:38:24:18:6:27 0/0:30:1:0:1:28:3.57%:41:5E-1:37:27:16:11:31 0/0:30:2:0:2:17:11.76%:18:2.4242E-1:36:15:10:5:19 0/0:31:5:0:5:40:12.5%:35:2.7371E-2:38:35:27:8:43 0/0:31:4:0:4:22:18.18%:15:5.3885E-2:37:18:13:5:24 0/0:32:2:0:2:22:9.09%:24:2.4419E-1:39:20:14:6:23 0/0:32:2:0:2:24:8.33%:27:2.4468E-1:37:22:18:4:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:14:3:19 0/0:30:1:0:1:19:5.26%:28:5E-1:39:18:13:5:19 0/0:0:0:0:0:11:0%:22:1E0:38:11:8:3:15 0/0:34:2:0:2:30:6.67%:37:2.4576E-1:38:28:15:13:33 0/0:30:2:0:2:21:9.52%:25:2.439E-1:37:19:14:5:22 0/0:31:1:0:1:25:4%:38:5E-1:38:24:15:9:28 0/0:33:3:0:3:26:11.54%:25:1.1765E-1:37:23:14:9:27 0/0:34:1:0:1:23:4.35%:34:5E-1:38:22:12:10:29 0/0:34:2:0:2:31:6.45%:40:2.459E-1:37:29:24:5:34 0/0:32:3:0:3:37:8.11%:40:1.1972E-1:36:33:23:10:42 0/0:31:2:0:2:17:11.76%:18:2.4242E-1:38:15:12:3:19 0/0:35:4:0:4:36:11.11%:34:5.7257E-2:37:32:23:9:38 0/0:32:4:0:4:23:17.39%:18:5.4264E-2:37:19:9:10:27 0/0:34:4:0:4:27:14.81%:23:5.5494E-2:37:23:19:4:28 0/0:33:3:0:3:24:12.5%:22:1.1702E-1:37:21:17:4:30 0/0:34:1:0:1:12:8.33%:14:5E-1:36:11:5:6:13 0/0:33:4:0:4:29:13.79%:26:5.5981E-2:39:25:20:5:31 0/0:30:2:0:2:38:5.26%:50:2.4667E-1:37:36:25:11:40 0/0:34:3:0:3:29:10.34%:28:1.1818E-1:37:25:17:8:30 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:22 0/0:34:1:0:1:23:4.35%:34:5E-1:37:22:15:7:24 0/0:32:2:0:2:23:8.7%:28:2.4444E-1:38:21:17:4:26 0/0:0:0:0:0:27:0%:52:1E0:37:27:22:5:32 0/0:34:1:0:1:22:4.55%:31:5E-1:38:21:16:5:27 0/0:34:1:0:1:23:4.35%:34:5E-1:37:22:13:9:28 0/0:31:1:0:1:19:5.26%:28:5E-1:37:18:11:7:21 0/0:34:3:0:3:23:13.04%:22:1.1667E-1:37:20:13:7:25 0/0:0:0:0:0:21:0%:40:1E0:37:21:18:3:21 0/0:33:6:0:6:25:24%:14:1.1145E-2:39:19:13:6:27 0/0:33:5:0:5:25:20%:17:2.5076E-2:36:20:16:4:26 0/0:33:3:0:3:31:9.68%:34:1.1885E-1:38:28:21:7:33 0/0:33:2:0:2:21:9.52%:25:2.439E-1:39:19:17:2:24 0/0:33:4:0:4:51:7.84%:59:5.8806E-2:37:47:36:11:53 0/0:34:2:0:2:24:8.33%:27:2.4468E-1:37:22:17:5:25 0/0:31:4:0:4:40:10%:40:5.7784E-2:37:36:30:6:44 0/0:31:1:0:1:40:2.5%:62:5E-1:38:39:29:10:44 0/0:31:5:0:5:25:20%:17:2.5076E-2:37:20:13:7:26 0/0:32:2:0:2:23:8.7%:28:2.4444E-1:37:21:15:6:26 0/0:32:4:0:4:42:9.52%:43:5.801E-2:37:38:33:5:47 0/0:30:1:0:1:33:3.03%:52:5E-1:37:32:24:8:37 0/0:33:6:0:6:41:14.63%:33:1.2841E-2:37:35:27:8:44 0/0:35:2:0:2:29:6.9%:37:2.4561E-1:37:27:23:4:32 0/0:34:3:0:3:27:11.11%:28:1.1792E-1:36:24:19:5:30 0/0:36:1:0:1:31:3.23%:48:5E-1:37:30:24:6:31 0/0:33:2:0:2:33:6.06%:44:2.4615E-1:38:31:28:3:34 0/0:35:3:0:3:23:13.04%:22:1.1667E-1:38:20:14:6:25 0/0:32:3:0:3:39:7.69%:47:1.2013E-1:37:36:26:10:42 0/0:30:1:0:1:23:4.35%:34:5E-1:38:22:14:8:28 0/0:32:2:0:2:26:7.69%:30:2.451E-1:37:24:16:8:29 0/0:33:5:0:5:26:19.23%:17:2.531E-2:37:21:18:3:27 0/0:32:2:0:2:29:6.9%:37:2.4561E-1:37:27:18:9:29 0/0:34:2:0:2:40:5%:53:2.4684E-1:37:38:31:7:42 0/0:36:3:0:3:28:10.71%:28:1.1818E-1:37:25:21:4:31 0/0:30:2:0:2:31:6.45%:40:2.459E-1:38:29:24:5:32 0/0:33:6:0:6:36:16.67%:25:1.2467E-2:39:30:24:6:37 0/0:31:3:0:3:27:11.11%:28:1.1792E-1:37:24:19:5:33 0/0:33:2:0:2:15:13.33%:16:2.4138E-1:37:13:10:3:19 0/0:33:3:0:3:22:13.64%:19:1.1628E-1:38:19:13:6:25 0/1:31:7:0:7:39:17.95%:22:5.8219E-3:38:32:24:8:40 0/0:35:3:0:3:28:10.71%:28:1.1818E-1:38:25:17:8:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:17:5:24 0/0:0:0:0:0:25:0%:48:1E0:38:25:21:4:25 0/0:30:3:0:3:36:8.33%:40:1.1972E-1:36:33:26:7:42 0/0:33:6:0:6:44:13.64%:36:1.3026E-2:37:38:27:11:46 0/0:32:4:0:4:25:16%:21:5.4928E-2:37:21:15:6:29 MTB_anc 735680 . C T . PASS AC=68;AF=0.227;AN=300;ANN=T|missense_variant|MODERATE|rplA_Rv0641|gene661|transcript|Transcript_gene661|Coding|1/1|c.164C>T|p.Ala55Val|164/708|164/708|55/235||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.735680C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.735680C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:39 0/0:0:0:0:0:26:0%:47:1E0:48:26:8:18:26 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:52 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:20 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 0/0:39:1:1:0:50:2%:80:5E-1:49:49:27:22:50 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:20:9:29 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:29 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:55:0%:99:1E0:44:55:31:24:57 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:21 0/0:0:0:0:0:58:0%:99:1E0:46:58:28:30:58 0/0:0:0:0:0:47:0%:89:1E0:46:47:28:19:47 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:47:35:12:23:35 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 1/1:47:22:12:10:23:95.65%:99:2.9149E-12:60:1:0:1:23 0/0:0:0:0:0:27:0%:52:1E0:53:27:13:14:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:28:23:54 0/0:38:1:0:1:30:3.33%:44:5E-1:51:29:14:15:30 0/0:0:0:0:0:39:0%:74:1E0:48:39:18:21:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 1/1:44:23:13:10:24:95.83%:99:7.7525E-13:39:1:1:0:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:34 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:57:0%:99:1E0:50:57:28:29:57 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:46:0%:85:1E0:46:46:23:23:46 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:19 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:46 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:34 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:44 0/0:0:0:0:0:25:0%:48:1E0:52:25:12:13:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:22:0%:40:1E0:53:22:14:8:23 0/0:0:0:0:0:46:0%:85:1E0:47:46:29:17:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:33 0/0:39:1:0:1:43:2.33%:70:5E-1:43:42:24:18:44 0/0:39:1:0:1:45:2.22%:73:5E-1:42:44:24:20:45 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:28 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:51 0/0:0:0:0:0:46:0%:85:1E0:49:46:21:25:46 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:41 0/0:0:0:0:0:48:0%:89:1E0:45:48:25:23:48 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:27:0%:52:1E0:50:27:11:16:28 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:42 1/1:51:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:60:1:1:0:23:4.35%:34:5E-1:44:22:14:8:23 1/1:51:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:33:0%:63:1E0:49:33:12:21:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:40 1/1:46:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:40 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:26:0%:47:1E0:49:26:17:9:26 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:25 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:46 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:56:0%:99:1E0:43:56:30:26:56 0/0:37:1:0:1:36:2.78%:55:5E-1:46:35:24:11:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 1/1:47:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 1/1:45:38:21:17:40:95%:99:8.0088E-21:49:2:0:2:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:28 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:43 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:24 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:76:0%:99:1E0:42:76:32:44:78 1/1:42:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:21 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:48 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:37 0/0:0:0:0:0:44:0%:81:1E0:44:44:27:17:44 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:33 0/0:0:0:0:0:49:0%:93:1E0:45:49:27:22:50 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:43 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:36 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:60:0%:99:1E0:40:60:36:24:61 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:13:25:38 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:44 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 0/0:60:1:1:0:69:1.45%:99:5E-1:43:68:38:30:70 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 MTB_anc 736544 . C T . PASS AC=8;AF=0.027;AN=300;ANN=T|missense_variant|MODERATE|mmaA4_Rv0642c|gene662|transcript|Transcript_gene662|Coding|1/1|c.660G>A|p.Met220Ile|660/906|660/906|220/301||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.736544C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.736544C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|thioacetazone|||n.736544C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:23 0/0:0:0:0:0:51:0%:97:1E0:47:51:21:30:51 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:51:35:17:18:35 0/0:0:0:0:0:35:0%:67:1E0:48:35:13:22:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:23:0%:44:1E0:51:23:13:10:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:25 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:18:0%:32:1E0:46:18:7:11:18 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:36:0%:66:1E0:53:36:19:17:36 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:40 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:60:1:0:1:27:3.7%:41:5E-1:45:26:10:16:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:45:0%:85:1E0:48:45:24:21:45 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:36 0/0:0:0:0:0:57:0%:99:1E0:46:57:21:36:58 1/1:48:44:21:23:45:97.78%:99:4.4304E-25:33:1:1:0:45 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:35 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:44 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:54:0%:99:1E0:47:54:31:23:54 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:30:0%:55:1E0:49:30:12:18:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:42:0%:77:1E0:48:42:18:24:42 0/0:38:1:1:0:29:3.45%:45:5E-1:44:28:9:19:29 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:43 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:38 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:43 0/0:0:0:0:0:71:0%:99:1E0:48:71:32:39:71 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:60:1:0:1:29:3.45%:45:5E-1:47:28:14:14:29 0/0:0:0:0:0:42:0%:77:1E0:47:42:25:17:42 0/0:0:0:0:0:32:0%:59:1E0:52:32:15:17:32 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:19 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:39:0%:74:1E0:49:39:16:23:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:23:0%:44:1E0:54:23:9:14:24 0/0:0:0:0:0:41:0%:78:1E0:48:41:23:18:41 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:33:0%:63:1E0:53:33:14:19:33 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:57:0%:99:1E0:44:57:26:31:58 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:36:0%:66:1E0:47:36:22:14:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:42 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:35 0/0:0:0:0:0:52:0%:96:1E0:41:52:24:28:53 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:37 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:35 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:55 0/0:0:0:0:0:61:0%:99:1E0:42:61:26:35:62 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:32 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:44 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:52 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:53 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:39 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:47 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:25:0%:48:1E0:40:25:20:5:25 0/0:0:0:0:0:59:0%:99:1E0:42:59:27:32:60 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:43 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:39:0%:74:1E0:47:39:24:15:39 0/0:0:0:0:0:57:0%:99:1E0:39:57:33:24:58 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:60:0%:99:1E0:42:60:32:28:60 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:30 0/0:0:0:0:0:52:0%:96:1E0:45:52:29:23:54 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:51 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:39 MTB_anc 750440 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|Rv0654_Rv0654|gene674|transcript|Transcript_gene674|Coding|1/1|c.441A>C|p.Gly147Gly|441/1506|441/1506|147/501||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.750440A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.750440A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:57:0%:99:1E0:43:57:38:19:57 0/0:0:0:0:0:20:0%:36:1E0:52:20:10:10:20 0/0:0:0:0:0:57:0%:99:1E0:48:57:32:25:57 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:46:0%:85:1E0:44:46:17:29:46 0/0:0:0:0:0:40:0%:74:1E0:51:40:23:17:41 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:37 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:28 0/0:0:0:0:0:49:0%:93:1E0:44:49:30:19:49 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:50:0%:92:1E0:46:50:14:36:50 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:41 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:44:0%:81:1E0:47:44:24:20:44 0/0:0:0:0:0:35:0%:67:1E0:50:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:49 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:32 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:33:0%:63:1E0:49:33:19:14:33 0/0:0:0:0:0:34:0%:62:1E0:49:34:21:13:34 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:43:0%:82:1E0:48:43:22:21:44 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:67:0%:99:1E0:47:67:37:30:67 0/0:0:0:0:0:62:0%:99:1E0:48:62:24:38:63 0/0:0:0:0:0:48:0%:89:1E0:48:48:23:25:49 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:49 0/0:0:0:0:0:41:0%:78:1E0:46:41:26:15:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:17:6:23 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:47 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:52:0%:96:1E0:46:52:23:29:53 0/0:0:0:0:0:14:0%:25:1E0:49:14:5:9:14 0/0:0:0:0:0:54:0%:99:1E0:45:54:29:25:55 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:46 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:46:0%:85:1E0:46:46:18:28:47 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:39 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:28:0%:51:1E0:49:28:10:18:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:55:0%:99:1E0:47:55:26:29:56 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:42 0/0:0:0:0:0:23:0%:44:1E0:50:23:14:9:25 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:31 0/0:0:0:0:0:46:0%:85:1E0:46:46:27:19:47 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:41:0%:78:1E0:51:41:20:21:41 0/0:0:0:0:0:50:0%:92:1E0:41:50:27:23:51 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:39 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:55:0%:99:1E0:45:55:27:28:56 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:10:18:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:37 0/0:0:0:0:0:39:0%:74:1E0:45:39:25:14:39 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:58:0%:99:1E0:41:58:31:27:60 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:19:7:27 0/0:0:0:0:0:48:0%:89:1E0:44:48:30:18:48 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:43 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:36 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:41 0/0:0:0:0:0:47:0%:89:1E0:49:47:25:22:47 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:50 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:37 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:57:0%:99:1E0:43:57:24:33:57 0/0:60:1:1:0:59:1.69%:98:5E-1:42:58:27:31:61 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:21:0%:40:1E0:48:21:6:15:21 0/0:0:0:0:0:58:0%:99:1E0:42:58:25:33:62 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:34 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:40 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:46 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:44 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:28:13:41 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:67:0%:99:1E0:43:67:35:32:68 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:42 0/0:0:0:0:0:51:0%:97:1E0:44:51:24:27:51 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:32 0/0:0:0:0:0:50:0%:92:1E0:45:50:27:23:51 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:49 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:50 MTB_anc 756178 . T G . PASS AC=124;AF=0.413;AN=300;ANN=G|synonymous_variant|LOW|atsD_Rv0663|gene683|transcript|Transcript_gene683|Coding|1/1|c.42T>G|p.Ala14Ala|42/2364|42/2364|14/787||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.756178T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.756178T>G||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:64:0%:99:1E0:43:64:32:32:65 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:30 1/1:44:29:19:10:30:96.67%:99:2.6212E-16:60:1:0:1:30 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:23 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:19 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:51:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:41:25:16:42:97.62%:99:2.5612E-23:39:1:1:0:42 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:36 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:24:11:13:25:96%:99:2.0568E-13:32:1:0:1:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:27 1/1:42:55:28:27:56:98.21%:99:1.4593E-31:34:1:1:0:56 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:5:18:24 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:45 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:31 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:25 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:44:19:25:45:97.78%:99:4.4304E-25:50:1:1:0:45 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:36:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:26 0/0:33:1:1:0:41:2.44%:66:5E-1:44:40:19:21:42 0/0:0:0:0:0:56:0%:99:1E0:43:56:36:20:56 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:36 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:42:0%:77:1E0:48:42:23:19:43 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:41:0%:78:1E0:39:41:24:17:41 1/1:42:29:15:14:30:96.67%:99:2.6212E-16:39:1:1:0:31 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:18 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:49 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:18 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:19 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:35 1/1:48:21:12:9:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:37:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:35:18:17:36:97.22%:99:8.3613E-20:39:1:1:0:37 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:27 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:31 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:35 0/0:38:1:1:0:26:3.85%:38:5E-1:47:25:14:11:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:6:29:38 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:44 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:21:0%:40:1E0:37:21:15:6:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:40 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:33 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:27 0/0:0:0:0:0:47:0%:89:1E0:39:47:21:26:48 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:32 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:52 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:50 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:49:0%:93:1E0:41:49:25:24:54 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:37 0/0:0:0:0:0:56:0%:99:1E0:39:56:31:25:56 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:37 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:48 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:42 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:40 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 1/1:39:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:39 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:18 0/0:0:0:0:0:36:0%:66:1E0:41:36:24:12:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:41 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:36:1:0:1:41:2.44%:66:5E-1:40:40:20:20:42 1/1:41:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 MTB_anc 757182 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|atsD_Rv0663|gene683|transcript|Transcript_gene683|Coding|1/1|c.1046G>A|p.Gly349Asp|1046/2364|1046/2364|349/787||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.757182G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.757182G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:50:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:50:22:28:51:98.04%:99:1.3013E-28:37:1:0:1:53 1/1:50:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:25:13:12:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:40:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:61 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:44:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 760115 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|rpoB_Rv0667|gene687|transcript|Transcript_gene687|Coding|1/1|c.309C>T|p.Asp103Asp|309/3519|309/3519|103/1172||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.760115C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.760115C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|rifampicin_rifabutin|||n.760115C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:35:16:19:36:97.22%:99:8.3613E-20:33:1:1:0:39 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:53:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:49:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:79:44:35:79:100%:99:4.3185E-47:0:0:0:0:80 1/1:46:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:47:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:49:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:48:32:16:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:24:12:12:25:96%:99:2.0568E-13:38:1:0:1:25 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:41:72:37:35:72:100%:99:6.7558E-43:0:0:0:0:74 1/1:42:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:45:28:13:15:29:96.55%:99:9.9776E-16:60:1:0:1:30 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:49:32:17:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 763031 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|rpoB_Rv0667|gene687|transcript|Transcript_gene687|Coding|1/1|c.3225C>T|p.Ala1075Ala|3225/3519|3225/3519|1075/1172||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.763031C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.763031C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|rifampicin_rifabutin|||n.763031C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:64:29:35:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:48:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:27:9:18:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:43:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:43:53:37:16:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:68:34:34:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 MTB_anc 764263 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|rpoC_Rv0668|gene688|transcript|Transcript_gene688|Coding|1/1|c.894G>A|p.Val298Val|894/3951|894/3951|298/1316||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.764263G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|compensates_for_rpoB_mutations|||n.764263G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.764263G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:60:29:31:60:100%:99:1.035E-35:0:0:0:0:61 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:51:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:27:10:17:29:93.1%:99:1.5465E-14:49:2:2:0:29 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:61:35:26:61:100%:99:2.609E-36:0:0:0:0:63 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:31:23:8:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:37:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:60:31:29:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 1/1:47:33:19:14:34:97.06%:99:1.2301E-18:60:1:0:1:36 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:60:29:31:60:100%:99:1.035E-35:0:0:0:0:62 1/1:37:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:41:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:13:16:30:96.67%:99:2.6212E-16:32:1:1:0:30 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 765150 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|rpoC_Rv0668|gene688|transcript|Transcript_gene688|Coding|1/1|c.1781G>A|p.Gly594Glu|1781/3951|1781/3951|594/1316||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.765150G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|compensates_for_rpoB_mutations|||n.765150G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.765150G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:55:29:26:56:98.21%:99:1.4593E-31:38:1:1:0:57 1/1:46:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:23:9:14:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:43:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:53:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:47:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:23:11:12:24:95.83%:99:7.7525E-13:38:1:1:0:25 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:70:33:37:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:48:31:25:6:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:72:43:29:72:100%:99:6.7558E-43:0:0:0:0:74 1/1:41:63:33:30:64:98.44%:99:2.7139E-36:37:1:0:1:67 1/1:41:32:13:19:33:96.97%:99:4.7095E-18:37:1:1:0:34 1/1:40:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:36:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:52 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:33:13:20:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:38:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 775305 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|echA5_Rv0675|gene695|transcript|Transcript_gene695|Coding|1/1|c.523G>A|p.Ala175Thr|523/792|523/792|175/263||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.775305G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.775305G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:45:48:27:21:48 0/0:0:0:0:0:16:0%:29:1E0:48:16:12:4:17 0/0:39:1:0:1:56:1.79%:91:5E-1:43:55:29:26:57 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:33 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:19 0/0:0:0:0:0:26:0%:47:1E0:49:26:7:19:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:37 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:17:0%:33:1E0:41:17:12:5:19 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:20 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:43 0/0:0:0:0:0:31:0%:59:1E0:52:31:12:19:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:16:0%:29:1E0:51:16:6:10:16 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:42 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:41 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:41 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:50:0%:92:1E0:47:50:23:27:50 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:56:0%:99:1E0:45:56:23:33:56 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:42 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:47:0%:89:1E0:42:47:16:31:48 0/0:0:0:0:0:37:0%:70:1E0:48:37:15:22:37 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:22:0%:40:1E0:45:22:15:7:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:32 0/0:39:1:1:0:30:3.33%:44:5E-1:42:29:12:17:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:29 0/0:0:0:0:0:39:0%:74:1E0:49:39:19:20:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:42:0%:77:1E0:46:42:17:25:42 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:47 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:39:1:1:0:46:2.17%:73:5E-1:46:45:25:20:47 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:15 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:11:24:35 0/0:0:0:0:0:14:0%:25:1E0:47:14:8:6:14 0/0:0:0:0:0:22:0%:40:1E0:47:22:16:6:22 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:49 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:16 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:39:1:1:0:28:3.57%:41:5E-1:47:27:13:14:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:65:0%:99:1E0:46:65:33:32:67 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:41 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:33 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:22 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:7:20:27 0/0:0:0:0:0:54:0%:99:1E0:40:54:35:19:54 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:55:0%:99:1E0:42:55:31:24:56 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:31 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:44 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:40:0%:74:1E0:48:40:23:17:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:46 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:52 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:24:0%:44:1E0:39:24:18:6:24 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:44 0/0:0:0:0:0:54:0%:99:1E0:42:54:28:26:55 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:41 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:42 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:39:1:1:0:44:2.27%:69:5E-1:44:43:21:22:44 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:47 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 MTB_anc 775381 . A C . PASS AC=16;AF=0.053;AN=300;ANN=C|missense_variant|MODERATE|echA5_Rv0675|gene695|transcript|Transcript_gene695|Coding|1/1|c.599A>C|p.Gln200Pro|599/792|599/792|200/263||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.775381A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.775381A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:18 0/0:0:0:0:0:58:0%:99:1E0:43:58:34:24:58 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:38:0%:70:1E0:46:38:25:13:39 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:24 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:17 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:29:0%:55:1E0:38:29:21:8:29 0/0:0:0:0:0:53:0%:99:1E0:45:53:24:29:53 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:0:0:0:0:18:0%:32:1E0:47:18:5:13:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:18 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:44 0/0:0:0:0:0:21:0%:40:1E0:52:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:46:0%:85:1E0:46:46:27:19:46 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:53:0%:99:1E0:47:53:27:26:53 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:49:0%:93:1E0:44:49:20:29:49 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:51 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:40 0/0:0:0:0:0:11:0%:22:1E0:47:11:5:6:11 0/0:0:0:0:0:52:0%:96:1E0:42:52:25:27:52 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:40:0%:74:1E0:48:40:20:20:41 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:37 0/0:0:0:0:0:39:0%:74:1E0:47:39:16:23:43 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:33 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:52:0%:96:1E0:45:52:21:31:52 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:48 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:49:29:9:20:29 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:17 0/0:0:0:0:0:16:0%:29:1E0:50:16:13:3:16 0/0:0:0:0:0:47:0%:89:1E0:40:47:22:25:47 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:24:11:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:62:0%:99:1E0:44:62:32:30:63 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:42 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:24:8:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:50:25:16:9:25 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:20:0%:36:1E0:49:20:7:13:20 0/0:0:0:0:0:58:0%:99:1E0:39:58:33:25:61 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:53 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:20 0/0:0:0:0:0:29:0%:55:1E0:38:29:20:9:30 0/0:0:0:0:0:32:0%:59:1E0:37:32:18:14:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:27:17:44 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:38:0%:70:1E0:39:38:24:14:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:16 0/0:0:0:0:0:36:0%:66:1E0:45:36:24:12:36 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:19 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:36 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:45 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:23 0/0:0:0:0:0:45:0%:85:1E0:40:45:31:14:45 0/0:0:0:0:0:66:0%:99:1E0:43:66:34:32:67 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:19 0/0:0:0:0:0:43:0%:82:1E0:39:43:25:18:45 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:45 0/0:0:0:0:0:40:0%:74:1E0:37:40:19:21:41 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:39 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:42:0%:77:1E0:38:42:27:15:43 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 MTB_anc 776100 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|mmpL5_Rv0676c|gene696|transcript|Transcript_gene696|Coding|1/1|c.2381T>C|p.Ile794Thr|2381/2895|2381/2895|794/964||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.776100A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.776100A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|bedaquiline_clofazimine|||n.776100A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:68:31:37:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:52:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:70:33:37:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:65:26:39:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 MTB_anc 778981 . G C . PASS AC=6;AF=0.020;AN=300;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|bedaquiline_clofazimine|||n.778981G>C||||||,C|intergenic_region|MODIFIER|mmpS5_Rv0677c-Rv0678_Rv0678|gene697-gene698|intergenic_region|gene697-gene698|||n.778981G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:21:0%:40:1E0:51:21:12:9:21 0/0:0:0:0:0:60:0%:99:1E0:49:60:24:36:60 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:43:0%:82:1E0:46:43:24:19:43 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:50:30:12:18:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:20:0%:36:1E0:50:20:7:13:20 0/0:0:0:0:0:59:0%:99:1E0:49:59:30:29:59 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:22:0%:40:1E0:50:22:7:15:22 0/0:0:0:0:0:18:0%:32:1E0:46:18:5:13:18 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:24 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:55:0%:99:1E0:45:55:31:24:55 0/0:0:0:0:0:37:0%:70:1E0:50:37:18:19:37 0/0:0:0:0:0:45:0%:85:1E0:47:45:22:23:45 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 1/1:46:18:8:10:19:94.74%:92:5.6585E-10:33:1:0:1:19 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:50:31:21:10:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:32 0/0:0:0:0:0:37:0%:70:1E0:53:37:20:17:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:43:0%:82:1E0:49:43:25:18:44 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:79:0%:99:1E0:49:79:37:42:79 0/0:0:0:0:0:52:0%:96:1E0:46:52:22:30:53 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:45:0%:85:1E0:46:45:25:20:45 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:36 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:42 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:34 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:46 0/0:0:0:0:0:57:0%:99:1E0:47:57:26:31:57 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:12:25:37 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:38 0/0:0:0:0:0:20:0%:36:1E0:49:20:8:12:20 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:37 0/0:0:0:0:0:56:0%:99:1E0:48:56:32:24:56 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:39:0%:74:1E0:48:39:18:21:39 0/0:0:0:0:0:25:0%:48:1E0:51:25:17:8:25 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:42:0%:77:1E0:49:42:19:23:43 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:17 0/0:0:0:0:0:38:0%:70:1E0:48:38:25:13:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:32 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:35:0%:67:1E0:50:35:16:19:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:36:0%:66:1E0:45:36:26:10:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:51:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:30 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:35 0/0:0:0:0:0:38:0%:70:1E0:51:38:20:18:38 0/0:0:0:0:0:53:0%:99:1E0:45:53:21:32:53 0/0:0:0:0:0:36:0%:66:1E0:46:36:23:13:36 0/0:0:0:0:0:56:0%:99:1E0:42:56:27:29:56 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:44:0%:81:1E0:45:44:17:27:44 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:42 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:36 0/0:0:0:0:0:42:0%:77:1E0:48:42:24:18:42 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:32:0%:59:1E0:50:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:47:32:10:22:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:41 0/0:0:0:0:0:59:0%:99:1E0:41:59:31:28:60 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:74:0%:99:1E0:44:74:39:35:75 0/0:0:0:0:0:63:0%:99:1E0:42:63:35:28:63 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:10:26:36 0/0:0:0:0:0:61:0%:99:1E0:41:61:28:33:62 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:15:31:46 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:36 0/0:0:0:0:0:53:0%:99:1E0:42:53:20:33:53 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:44 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:47 0/0:0:0:0:0:46:0%:85:1E0:42:46:17:29:47 0/0:0:0:0:0:64:0%:99:1E0:44:64:22:42:66 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:55:0%:99:1E0:42:55:23:32:55 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:39 0/0:0:0:0:0:50:0%:92:1E0:45:50:24:26:50 0/0:0:0:0:0:69:0%:99:1E0:40:69:38:31:70 0/0:0:0:0:0:50:0%:92:1E0:46:50:31:19:51 0/0:0:0:0:0:52:0%:96:1E0:45:52:26:26:52 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:49:0%:93:1E0:44:49:17:32:49 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:53 0/0:0:0:0:0:55:0%:99:1E0:44:55:24:31:55 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 MTB_anc 780761 . A C . PASS AC=68;AF=0.227;AN=300;ANN=C|missense_variant|MODERATE|Rv0681_Rv0681|gene701|transcript|Transcript_gene701|Coding|1/1|c.41A>C|p.Glu14Ala|41/591|41/591|14/196||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.780761A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.780761A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:40:48:24:24:48 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:20 0/0:0:0:0:0:51:0%:97:1E0:44:51:22:29:52 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:26 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:25 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:38 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:48 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:48:0%:89:1E0:42:48:19:29:48 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:15 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:34 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:30 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:48 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:34 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 1/1:43:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:37 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:49 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:0:0:0:0:43:0%:82:1E0:47:43:19:24:43 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:43:0%:82:1E0:49:43:27:16:43 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:34 0/0:0:0:0:0:56:0%:99:1E0:47:56:32:24:57 0/0:0:0:0:0:47:0%:89:1E0:44:47:19:28:48 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:15:0%:29:1E0:46:15:8:7:15 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:48 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:46 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:26 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:31 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:43 0/0:38:1:1:0:35:2.86%:55:5E-1:41:34:18:16:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:33 0/0:0:0:0:0:37:0%:70:1E0:37:37:18:19:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:41 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:42 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:13:16:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 0/0:0:0:0:0:19:0%:37:1E0:48:19:5:14:19 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:24 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:24:0%:44:1E0:50:24:14:10:24 1/1:47:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:30 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:16 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 1/1:51:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:39 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:47 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:19 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:28 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:36 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:22 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:23 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:32 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:26 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:51 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:27 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:24 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:30:0%:55:1E0:35:30:14:16:33 0/0:0:0:0:0:27:0%:52:1E0:37:27:20:7:32 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:46 0/0:0:0:0:0:33:0%:63:1E0:37:33:13:20:37 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:22 1/1:38:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:32 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:49:0%:93:1E0:38:49:21:28:52 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:14:28:44 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:44:25:19:45:97.78%:99:4.4304E-25:36:1:1:0:46 0/0:0:0:0:0:63:0%:99:1E0:42:63:33:30:64 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:36 MTB_anc 788259 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0688_Rv0688|gene708|transcript|Transcript_gene708|Coding|1/1|c.320G>T|p.Gly107Val|320/1221|320/1221|107/406||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.788259G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.788259G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:54:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:52:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:12:16:29:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:46:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:65:40:25:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 792110 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv0692_Rv0692|gene713|transcript|Transcript_gene713|Coding|1/1|c.280C>T|p.Leu94Leu|280/330|280/330|94/109||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.792110C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.792110C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:40 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:23 0/0:0:0:0:0:42:0%:77:1E0:44:42:28:14:43 0/0:38:1:1:0:27:3.7%:41:5E-1:43:26:15:11:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:48:26:17:9:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:20:5:25 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:44:0%:81:1E0:38:44:30:14:45 0/0:0:0:0:0:19:0%:37:1E0:47:19:13:6:19 0/0:0:0:0:0:54:0%:99:1E0:43:54:34:20:55 0/0:34:1:1:0:16:6.25%:21:5E-1:42:15:9:6:17 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:23:0%:44:1E0:48:23:15:8:23 0/0:0:0:0:0:21:0%:40:1E0:47:21:15:6:21 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:20 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:20 0/0:0:0:0:0:52:0%:96:1E0:43:52:40:12:52 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:24:7:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:19 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:25:12:37 0/0:32:1:1:0:34:2.94%:51:5E-1:40:33:22:11:35 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 0/0:0:0:0:0:57:0%:99:1E0:46:57:31:26:60 0/1:43:40:23:17:50:80%:99:7.4728E-19:44:10:6:4:50 0/0:0:0:0:0:45:0%:85:1E0:45:45:28:17:45 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:17:0%:33:1E0:43:17:11:6:17 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:12:0%:21:1E0:50:12:7:5:12 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:36:0%:66:1E0:40:36:23:13:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:39:1:1:0:48:2.08%:76:5E-1:42:47:23:24:49 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:23:11:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:36 0/0:0:0:0:0:44:0%:81:1E0:41:44:31:13:44 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:54:0%:99:1E0:43:54:35:19:56 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:14 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:38 0/0:0:0:0:0:30:0%:55:1E0:51:30:19:11:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:46:0%:85:1E0:47:46:32:14:46 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:19:5:25 0/0:0:0:0:0:44:0%:81:1E0:41:44:28:16:45 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:41 0/0:0:0:0:0:23:0%:44:1E0:44:23:18:5:23 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:26:0%:47:1E0:48:26:17:9:27 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:16:0%:29:1E0:43:16:12:4:16 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:17:8:25 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:49 0/0:0:0:0:0:29:0%:55:1E0:42:29:21:8:29 0/0:0:0:0:0:52:0%:96:1E0:44:52:33:19:52 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:23:8:32 0/0:0:0:0:0:43:0%:82:1E0:40:43:31:12:43 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:25 0/0:0:0:0:0:17:0%:33:1E0:45:17:12:5:18 0/0:0:0:0:0:17:0%:33:1E0:49:17:14:3:17 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:36 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:21 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:41 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:20:7:27 0/0:0:0:0:0:78:0%:99:1E0:41:78:44:34:78 0/0:0:0:0:0:58:0%:99:1E0:40:58:39:19:58 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:28 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:41 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:38 0/0:0:0:0:0:45:0%:85:1E0:39:45:28:17:49 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:39 0/0:0:0:0:0:48:0%:89:1E0:37:48:31:17:49 0/0:0:0:0:0:52:0%:96:1E0:40:52:31:21:52 0/0:0:0:0:0:44:0%:81:1E0:40:44:27:17:45 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:43:0%:82:1E0:39:43:28:15:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:44:0%:81:1E0:39:44:25:19:45 0/0:0:0:0:0:28:0%:51:1E0:37:28:18:10:29 0/0:0:0:0:0:44:0%:81:1E0:41:44:27:17:45 0/0:37:1:1:0:54:1.85%:87:5E-1:37:53:32:21:55 0/0:60:1:0:1:33:3.03%:52:5E-1:43:32:21:11:35 0/0:0:0:0:0:45:0%:85:1E0:42:45:28:17:45 0/0:0:0:0:0:42:0%:77:1E0:40:42:35:7:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:37:1:0:1:34:2.94%:51:5E-1:38:33:23:10:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:24 0/0:37:1:1:0:36:2.78%:55:5E-1:43:35:22:13:38 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:43 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:43:0%:82:1E0:40:43:27:16:45 0/0:0:0:0:0:47:0%:89:1E0:39:47:30:17:49 MTB_anc 793000 . G C . PASS AC=12;AF=0.040;AN=300;ANN=C|missense_variant|MODERATE|Rv0693_Rv0693|gene714|transcript|Transcript_gene714|Coding|1/1|c.844G>C|p.Val282Leu|844/1176|844/1176|282/391||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.793000G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.793000G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:9:0%:18:1E0:45:9:6:3:10 0/0:0:0:0:0:47:0%:89:1E0:44:47:15:32:49 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:19 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:19:0%:37:1E0:42:19:15:4:19 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:33 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:21:0%:40:1E0:51:21:12:9:21 0/0:0:0:0:0:44:0%:81:1E0:43:44:27:17:45 0/0:0:0:0:0:19:0%:37:1E0:48:19:13:6:19 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:16:0%:29:1E0:41:16:12:4:16 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:56 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:15 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:65:0%:99:1E0:44:65:33:32:67 0/0:0:0:0:0:45:0%:85:1E0:46:45:23:22:46 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:37 0/0:0:0:0:0:11:0%:22:1E0:38:11:6:5:11 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:42 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:35 0/0:37:1:0:1:33:3.03%:52:5E-1:42:32:13:19:33 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:24 0/0:0:0:0:0:15:0%:29:1E0:47:15:11:4:16 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:42 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:47 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:38 0/0:0:0:0:0:22:0%:40:1E0:37:22:17:5:22 0/0:0:0:0:0:46:0%:85:1E0:43:46:29:17:46 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:26:11:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:41 0/0:0:0:0:0:33:0%:63:1E0:47:33:21:12:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:49:0%:93:1E0:46:49:22:27:49 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:44:0%:81:1E0:47:44:27:17:44 0/0:0:0:0:0:22:0%:40:1E0:44:22:16:6:22 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:51:22:10:12:22 0/0:0:0:0:0:12:0%:21:1E0:43:12:6:6:12 0/0:0:0:0:0:33:0%:63:1E0:48:33:12:21:33 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:33:0%:63:1E0:50:33:23:10:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:25:23:48 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:14:0%:25:1E0:46:14:9:5:14 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:21 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:51:28:14:14:28 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:49 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:49:0%:93:1E0:42:49:20:29:49 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 1/1:43:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:41 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:27:14:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:34 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:23 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:22 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:38 0/0:0:0:0:0:41:0%:78:1E0:39:41:28:13:43 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:60:1:1:0:53:1.89%:83:5E-1:42:51:28:23:53 0/0:0:0:0:0:57:0%:99:1E0:41:57:26:31:58 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:38:1:1:0:56:1.79%:91:5E-1:39:55:34:21:57 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:43 0/0:0:0:0:0:45:0%:85:1E0:39:45:20:25:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:44 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:29 0/0:0:0:0:0:53:0%:99:1E0:42:53:29:24:54 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:39 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:61:0%:99:1E0:38:61:32:29:61 0/0:0:0:0:0:46:0%:85:1E0:42:46:17:29:46 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:19:7:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:38 0/0:0:0:0:0:14:0%:25:1E0:49:14:11:3:14 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:49 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:40 MTB_anc 800200 . C G . PASS AC=299;AF=0.997;AN=300;ANN=G|intergenic_region|MODIFIER|Rv0699_Rv0699-rpsJ_Rv0700|gene720-gene721|intergenic_region|gene720-gene721|||n.800200C>G||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:25:17:8:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:56:19:37:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:49:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:63:27:36:63:100%:99:1.657E-37:0:0:0:0:63 1/1:47:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:33:19:14:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:42:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:52:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 0/1:45:16:9:7:18:88.89%:87:1.6637E-9:0:0:0:0:18 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:61:21:40:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:29:16:13:31:93.55%:99:3.3259E-17:0:0:0:0:32 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:63:30:33:63:100%:99:1.657E-37:0:0:0:0:65 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:46:17:29:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:13:21:36:94.44%:99:3.5146E-20:0:0:0:0:36 1/1:46:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:17:12:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:52:16:36:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:44:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:58:29:29:59:98.31%:99:2.4634E-33:37:1:0:1:60 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 805663 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|rpmC_Rv0709|gene730|transcript|Transcript_gene730|Coding|1/1|c.138G>T|p.Arg46Arg|138/234|138/234|46/77||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.805663G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.805663G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:63:30:33:63:100%:99:1.657E-37:0:0:0:0:65 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:60:27:33:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:50:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:57:18:39:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:74:33:41:74:100%:99:4.2804E-44:0:0:0:0:75 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:49:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:59 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:52 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 MTB_anc 807835 . C G . PASS AC=2;AF=6.711e-03;AN=298;ANN=G|missense_variant|MODERATE|atsA_Rv0711|gene732|transcript|Transcript_gene732|Coding|1/1|c.1501C>G|p.Gln501Glu|1501/2364|1501/2364|501/787||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.807835C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.807835C>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:36:4:0:4:26:15.38%:20:5.5222E-2:43:22:6:16:27 0/0:20:1:0:1:14:7.14%:17:5E-1:46:13:3:10:14 0/1:31:7:0:7:37:18.92%:22:5.721E-3:41:30:11:19:41 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:22 0/0:26:2:0:2:11:18.18%:10:2.381E-1:46:9:2:7:12 0/0:39:1:0:1:17:5.88%:24:5E-1:42:16:6:10:20 0/0:20:1:0:1:16:6.25%:21:5E-1:39:15:9:6:20 0/0:35:2:0:2:12:16.67%:10:2.3913E-1:43:10:1:9:14 0/0:20:2:0:2:17:11.76%:18:2.4242E-1:44:15:3:12:21 0/0:24:4:0:4:37:10.81%:38:5.7399E-2:44:33:14:19:41 0/0:0:0:0:0:13:0%:25:1E0:46:13:5:8:14 0/0:36:1:0:1:20:5%:27:5E-1:50:19:4:15:21 0/0:39:1:0:1:15:6.67%:21:5E-1:46:14:3:11:17 0/0:28:2:0:2:30:6.67%:37:2.4576E-1:42:28:11:17:34 0/0:33:1:0:1:12:8.33%:14:5E-1:40:11:4:7:13 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:24 0/0:37:1:0:1:11:9.09%:14:5E-1:42:10:3:7:11 0/0:0:0:0:0:13:0%:25:1E0:42:13:3:10:14 0/0:0:0:0:0:10:0%:17:1E0:41:10:2:8:11 0/0:0:0:0:0:17:0%:33:1E0:47:17:4:13:21 0/0:37:3:0:3:10:30%:4:1.0526E-1:45:7:3:4:11 0/0:37:2:0:2:28:7.14%:34:2.4545E-1:43:26:8:18:31 0/0:32:4:0:4:16:25%:8:5.0612E-2:42:12:8:4:20 0/0:27:4:0:4:31:12.9%:29:5.6405E-2:44:27:11:16:36 0/0:20:1:0:1:19:5.26%:28:5E-1:40:18:3:15:20 0/0:0:0:0:0:12:0%:21:1E0:45:12:3:9:12 0/0:37:1:0:1:15:6.67%:21:5E-1:45:14:3:11:15 0/0:25:3:0:3:12:25%:6:1.087E-1:45:9:6:3:12 0/0:33:1:0:1:13:7.69%:18:5E-1:48:12:3:9:16 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:20 0/0:29:3:0:3:20:15%:16:1.1538E-1:45:17:3:14:21 0/0:37:1:0:1:12:8.33%:14:5E-1:44:11:5:6:16 0/0:20:1:0:1:25:4%:38:5E-1:46:24:6:18:26 0/0:28:2:0:2:21:9.52%:25:2.439E-1:45:19:6:13:21 0/0:20:2:0:2:23:8.7%:24:2.4419E-1:45:20:8:12:27 0/0:20:1:0:1:14:7.14%:17:5E-1:42:13:4:9:15 0/0:37:2:0:2:21:9.52%:25:2.439E-1:40:19:8:11:21 0/0:32:4:0:4:40:10%:40:5.7784E-2:44:36:14:22:44 0/0:32:4:0:4:35:11.43%:35:5.7106E-2:42:31:12:19:38 0/0:28:2:0:2:19:10.53%:21:2.4324E-1:44:17:8:9:21 0/0:37:1:0:1:24:4.17%:34:5E-1:43:23:9:14:25 0/0:39:1:0:1:18:5.56%:24:5E-1:42:17:4:13:19 0/0:0:0:0:0:9:0%:18:1E0:39:9:2:7:9 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:21 0/0:28:2:0:2:13:15.38%:13:2.4E-1:47:11:3:8:14 0/0:0:0:0:0:12:0%:21:1E0:41:12:5:7:14 0/0:20:1:0:1:22:4.55%:31:5E-1:44:21:7:14:23 0/0:20:1:0:1:15:6.67%:21:5E-1:46:14:2:12:17 0/0:0:0:0:0:9:0%:18:1E0:47:9:3:6:9 0/0:31:3:0:3:23:13.04%:22:1.1667E-1:41:20:8:12:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:20:1:0:1:13:7.69%:18:5E-1:40:12:7:5:15 0/0:26:2:0:2:12:16.67%:10:2.3913E-1:43:10:3:7:17 0/0:29:2:0:2:17:11.76%:18:2.4242E-1:44:15:7:8:18 0/0:25:1:0:1:14:7.14%:17:5E-1:45:13:6:7:15 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:17 0/0:33:1:0:1:17:5.88%:24:5E-1:45:16:4:12:18 0/0:20:2:0:2:18:11.11%:18:2.4286E-1:42:16:5:11:18 0/0:25:1:0:1:24:4.17%:34:5E-1:48:23:6:17:24 0/0:26:2:0:2:19:10.53%:21:2.4324E-1:38:17:11:6:23 0/0:22:2:0:2:14:14.29%:12:2.4074E-1:39:12:5:7:15 0/0:0:0:0:0:12:0%:21:1E0:44:12:3:9:15 0/0:26:2:0:2:17:11.76%:18:2.4242E-1:43:15:6:9:20 0/0:30:4:0:4:18:22.22%:10:5.1948E-2:38:14:6:8:22 0/0:20:1:0:1:26:3.85%:38:5E-1:43:25:8:17:28 0/0:27:4:0:4:33:12.12%:29:5.6596E-2:40:28:12:16:36 0/0:34:2:0:2:21:9.52%:21:2.4359E-1:42:18:5:13:23 0/0:37:2:0:2:16:12.5%:15:2.4194E-1:46:14:2:12:16 0/0:33:1:0:1:8:12.5%:8:5E-1:49:7:2:5:8 0/0:0:0:0:0:8:0%:14:1E0:46:8:0:8:8 0/0:33:4:0:4:21:19.05%:15:5.3471E-2:47:17:4:13:23 0/0:32:2:0:2:16:12.5%:15:2.4194E-1:44:14:4:10:20 0/0:22:2:0:2:18:11.11%:18:2.4286E-1:45:16:6:10:22 0/0:31:4:0:4:24:16.67%:18:5.461E-2:46:20:8:12:27 0/0:22:3:0:3:22:13.64%:19:1.1628E-1:44:19:4:15:24 0/0:0:0:0:0:9:0%:18:1E0:52:9:1:8:9 0/0:38:1:0:1:13:7.69%:18:5E-1:39:12:3:9:13 0/0:35:2:0:2:23:8.7%:28:2.4444E-1:39:21:10:11:30 0/0:0:0:0:0:13:0%:25:1E0:43:13:3:10:14 0/0:0:0:0:0:15:0%:29:1E0:40:15:5:10:18 0/0:38:1:1:0:14:7.14%:17:5E-1:38:13:1:12:15 0/0:35:1:0:1:24:4.17%:34:5E-1:44:23:5:18:26 0/0:0:0:0:0:11:0%:22:1E0:42:11:3:8:11 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:21 0/0:25:3:0:3:16:18.75%:11:1.129E-1:43:13:4:9:18 0/0:0:0:0:0:12:0%:21:1E0:47:12:1:11:14 0/0:37:2:0:2:16:12.5%:15:2.4194E-1:47:14:4:10:17 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:8 0/0:34:2:0:2:19:10.53%:21:2.4324E-1:43:17:6:11:19 0/0:33:1:0:1:17:5.88%:24:5E-1:43:16:5:11:18 0/0:35:2:0:2:29:6.9%:37:2.4561E-1:44:27:7:20:32 0/0:26:2:0:2:14:14.29%:12:2.4074E-1:42:12:3:9:14 0/0:35:4:0:4:29:13.79%:26:5.5981E-2:42:25:7:18:31 0/0:0:0:0:0:17:0%:33:1E0:44:17:6:11:19 0/0:20:1:0:1:20:5%:27:5E-1:46:19:8:11:22 0/0:33:1:0:1:15:6.67%:21:5E-1:41:14:6:8:18 0/0:33:4:0:4:11:36.36%:4:4.5113E-2:38:7:4:3:11 0/0:27:1:0:1:22:4.55%:31:5E-1:36:21:8:13:24 0/0:33:1:0:1:11:9.09%:14:5E-1:39:10:4:6:12 0/0:27:2:0:2:19:10.53%:21:2.4324E-1:41:17:3:14:21 0/0:30:2:0:2:13:15.38%:13:2.4E-1:44:11:2:9:15 0/0:20:1:0:1:21:4.76%:31:5E-1:41:20:4:16:21 0/0:27:3:0:3:19:15.79%:17:1.1486E-1:40:16:5:11:22 0/0:28:3:0:3:13:23.08%:9:1.1E-1:41:10:2:8:14 0/0:37:2:0:2:13:15.38%:13:2.4E-1:49:11:3:8:13 0/0:26:1:0:1:16:6.25%:21:5E-1:47:15:5:10:20 0/0:20:1:0:1:14:7.14%:17:5E-1:44:13:1:12:14 0/0:29:3:0:3:21:14.29%:19:1.1585E-1:39:18:6:12:21 0/0:24:1:0:1:26:3.85%:38:5E-1:40:25:9:16:27 0/0:26:2:0:2:17:11.76%:18:2.4242E-1:45:15:4:11:17 0/0:33:1:0:1:20:5%:27:5E-1:39:19:8:11:22 0/0:0:0:0:0:16:0%:29:1E0:45:16:4:12:16 0/0:29:2:0:2:15:13.33%:16:2.4138E-1:42:13:3:10:16 0/0:36:2:0:2:18:11.11%:18:2.4286E-1:42:16:4:12:19 0/0:30:4:0:4:23:17.39%:18:5.4264E-2:41:19:6:13:25 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:19 0/0:31:2:0:2:14:14.29%:12:2.4074E-1:39:12:5:7:15 0/0:35:3:0:3:20:15%:16:1.1538E-1:45:17:4:13:23 0/0:36:4:0:4:18:22.22%:10:5.1948E-2:43:14:6:8:20 0/0:29:2:0:2:28:7.14%:34:2.4545E-1:40:26:10:16:30 0/0:35:2:0:2:31:6.45%:40:2.459E-1:40:29:14:15:35 0/0:37:1:0:1:23:4.35%:34:5E-1:42:22:6:16:23 0/0:28:2:0:2:17:11.76%:18:2.4242E-1:45:15:5:10:17 0/0:34:3:0:3:18:16.67%:14:1.1429E-1:46:15:6:9:19 0/0:33:1:0:1:18:5.56%:24:5E-1:41:17:6:11:19 0/0:28:3:0:3:16:18.75%:11:1.129E-1:42:13:5:8:20 0/0:36:3:0:3:14:21.43%:9:1.1111E-1:37:11:4:7:18 0/0:31:2:0:2:19:10.53%:21:2.4324E-1:40:17:7:10:19 0/0:36:3:0:3:24:12.5%:22:1.1702E-1:37:21:6:15:24 0/0:37:3:0:3:15:20%:11:1.1207E-1:36:12:5:7:18 0/0:0:0:0:0:16:0%:29:1E0:41:16:3:13:17 0/0:29:3:0:3:16:18.75%:11:1.129E-1:42:13:2:11:17 0/0:37:1:0:1:13:7.69%:18:5E-1:42:12:4:8:18 0/0:30:3:0:3:17:17.65%:14:1.1364E-1:39:14:4:10:20 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:15 0/0:33:4:0:4:25:16%:21:5.4928E-2:42:21:5:16:27 0/0:30:5:0:5:30:16.67%:21:2.6093E-2:39:25:7:18:32 0/0:33:2:0:2:18:11.11%:18:2.4286E-1:38:16:8:8:21 0/0:24:4:0:4:23:17.39%:18:5.4264E-2:39:19:8:11:25 0/0:35:4:0:4:18:22.22%:10:5.1948E-2:37:14:7:7:19 0/0:27:2:0:2:24:8.33%:27:2.4468E-1:44:22:8:14:29 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:21 0/1:28:8:0:8:23:34.78%:27:1.8791E-3:44:15:4:11:27 0/0:37:1:0:1:25:4%:38:5E-1:40:24:6:18:27 0/0:25:3:0:3:31:9.68%:34:1.1885E-1:41:28:10:18:32 0/0:0:0:0:0:8:0%:14:1E0:44:8:3:5:10 0/0:34:2:0:2:16:12.5%:15:2.4194E-1:41:14:6:8:18 0/0:20:1:0:1:23:4.35%:34:5E-1:39:22:9:13:27 0/0:31:4:0:4:30:13.33%:26:5.62E-2:42:26:9:17:33 0/0:20:1:0:1:14:7.14%:17:5E-1:40:13:2:11:15 MTB_anc 807838 . T A . PASS AC=1;AF=3.356e-03;AN=298;ANN=A|missense_variant|MODERATE|atsA_Rv0711|gene732|transcript|Transcript_gene732|Coding|1/1|c.1504T>A|p.Phe502Ile|1504/2364|1504/2364|502/787||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.807838T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.807838T>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:34:4:0:4:25:16%:21:5.4928E-2:42:21:5:16:27 0/0:33:1:0:1:12:8.33%:14:5E-1:49:11:1:10:14 0/0:33:6:0:6:36:16.67%:25:1.2467E-2:41:30:11:19:41 0/0:34:2:0:2:18:11.11%:18:2.4286E-1:43:16:8:8:22 0/0:33:1:0:1:10:10%:11:5E-1:46:9:2:7:12 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:22 0/0:25:3:0:3:16:18.75%:11:1.129E-1:42:13:8:5:20 0/0:38:1:0:1:11:9.09%:14:5E-1:40:10:1:9:13 0/0:27:4:0:4:17:23.53%:11:5.132E-2:46:13:3:10:21 0/0:32:3:0:3:34:8.82%:37:1.194E-1:45:31:12:19:40 0/0:20:1:0:1:12:8.33%:14:5E-1:51:11:4:7:14 0/0:0:0:0:0:20:0%:36:1E0:47:20:4:16:22 0/0:33:1:0:1:15:6.67%:21:5E-1:44:14:2:12:15 0/0:20:1:0:1:29:3.45%:45:5E-1:41:28:12:16:32 0/0:33:1:0:1:11:9.09%:14:5E-1:36:10:3:7:12 0/0:35:1:0:1:17:5.88%:24:5E-1:43:16:7:9:21 0/0:35:1:0:1:13:7.69%:18:5E-1:43:12:3:9:13 0/0:35:1:0:1:14:7.14%:17:5E-1:42:13:3:10:14 0/0:0:0:0:0:9:0%:18:1E0:40:9:2:7:11 0/0:35:2:0:2:18:11.11%:18:2.4286E-1:49:16:4:12:21 0/0:37:3:0:3:10:30%:4:1.0526E-1:44:7:3:4:11 0/0:39:1:0:1:27:3.7%:41:5E-1:45:26:8:18:31 0/0:29:4:0:4:16:25%:8:5.0612E-2:41:12:7:5:20 0/0:34:4:0:4:32:12.5%:29:5.6596E-2:45:28:14:14:36 0/0:37:1:0:1:18:5.56%:24:5E-1:41:17:2:15:18 0/0:0:0:0:0:12:0%:21:1E0:48:12:3:9:12 0/0:37:1:0:1:14:7.14%:17:5E-1:46:13:3:10:15 0/0:20:2:0:2:11:18.18%:10:2.381E-1:43:9:6:3:12 0/0:20:2:0:2:12:16.67%:10:2.3913E-1:53:10:2:8:15 0/0:20:1:0:1:19:5.26%:28:5E-1:41:18:5:13:20 0/0:35:3:0:3:21:14.29%:19:1.1585E-1:45:18:4:14:21 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:48:10:4:6:15 0/0:20:1:0:1:22:4.55%:31:5E-1:49:21:3:18:26 0/0:37:1:0:1:20:5%:27:5E-1:44:19:6:13:21 0/0:25:3:0:3:23:13.04%:22:1.1667E-1:46:20:8:12:26 0/0:20:1:0:1:13:7.69%:18:5E-1:43:12:4:8:14 0/0:37:1:0:1:19:5.26%:28:5E-1:41:18:7:11:20 0/0:29:5:0:5:40:12.5%:35:2.7371E-2:43:35:12:23:42 0/0:33:5:0:5:35:14.29%:30:2.6822E-2:43:30:12:18:38 0/0:20:1:0:1:19:5.26%:28:5E-1:42:18:9:9:22 0/0:35:1:0:1:24:4.17%:34:5E-1:41:23:8:15:26 0/0:38:1:0:1:19:5.26%:28:5E-1:41:18:4:14:20 0/0:0:0:0:0:9:0%:18:1E0:39:9:2:7:9 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:21 0/0:20:1:0:1:13:7.69%:18:5E-1:44:12:3:9:14 0/0:0:0:0:0:11:0%:22:1E0:42:11:4:7:13 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:23 0/0:37:1:0:1:18:5.56%:24:5E-1:42:17:4:13:19 0/0:0:0:0:0:8:0%:14:1E0:45:8:2:6:8 0/0:34:3:0:3:22:13.64%:19:1.1628E-1:41:19:8:11:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:1:0:1:15:6.67%:21:5E-1:39:14:6:8:17 0/0:37:3:0:3:13:23.08%:9:1.1E-1:42:10:3:7:17 0/0:25:3:0:3:19:15.79%:17:1.1486E-1:44:16:8:8:19 0/0:34:1:0:1:14:7.14%:17:5E-1:45:13:6:7:15 0/0:0:0:0:0:14:0%:25:1E0:40:14:6:8:16 0/0:33:1:0:1:16:6.25%:21:5E-1:46:15:3:12:18 0/0:36:2:0:2:19:10.53%:21:2.4324E-1:42:17:6:11:19 0/0:0:0:0:0:23:0%:44:1E0:46:23:6:17:24 0/0:29:2:0:2:19:10.53%:21:2.4324E-1:40:17:10:7:24 0/0:37:1:0:1:13:7.69%:18:5E-1:40:12:5:7:15 0/0:0:0:0:0:12:0%:21:1E0:43:12:2:10:15 0/0:29:3:0:3:15:20%:11:1.1207E-1:44:12:3:9:20 0/0:31:4:0:4:17:23.53%:11:5.132E-2:39:13:6:7:20 0/0:27:2:0:2:25:8%:31:2.449E-1:45:23:6:17:28 0/0:32:4:0:4:31:12.9%:29:5.6405E-2:41:27:9:18:36 0/0:33:1:0:1:20:5%:27:5E-1:40:19:4:15:22 0/0:30:2:0:2:16:12.5%:15:2.4194E-1:45:14:2:12:16 0/0:37:1:0:1:7:14.29%:8:5E-1:46:6:1:5:8 0/0:0:0:0:0:8:0%:14:1E0:46:8:0:8:8 0/0:35:2:0:2:18:11.11%:18:2.4286E-1:46:16:3:13:23 0/0:0:0:0:0:14:0%:25:1E0:44:14:5:9:20 0/0:20:1:0:1:15:6.67%:21:5E-1:43:14:4:10:21 0/0:28:3:0:3:22:13.64%:19:1.1628E-1:44:19:7:12:27 0/0:28:3:0:3:23:13.04%:22:1.1667E-1:45:20:5:15:24 0/0:0:0:0:0:10:0%:17:1E0:49:10:2:8:10 0/0:39:1:0:1:14:7.14%:17:5E-1:42:13:4:9:15 0/0:33:3:0:3:20:15%:16:1.1538E-1:39:17:8:9:28 0/0:0:0:0:0:12:0%:21:1E0:43:12:2:10:13 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:17 0/0:0:0:0:0:13:0%:25:1E0:37:13:2:11:15 0/0:34:2:0:2:24:8.33%:27:2.4468E-1:43:22:5:17:25 0/0:0:0:0:0:10:0%:17:1E0:42:10:2:8:11 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:22 0/0:23:3:0:3:16:18.75%:11:1.129E-1:44:13:4:9:18 0/0:33:1:0:1:13:7.69%:18:5E-1:45:12:2:10:15 0/0:36:2:0:2:15:13.33%:16:2.4138E-1:45:13:4:9:17 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:8 0/0:20:1:0:1:18:5.56%:24:5E-1:44:17:6:11:19 0/0:33:1:0:1:17:5.88%:24:5E-1:44:16:5:11:18 0/0:36:3:0:3:29:10.34%:31:1.1842E-1:45:26:6:20:32 0/0:28:2:0:2:14:14.29%:12:2.4074E-1:46:12:3:9:14 0/0:35:2:0:2:24:8.33%:27:2.4468E-1:42:22:5:17:30 0/0:0:0:0:0:16:0%:29:1E0:45:16:5:11:19 0/0:37:1:0:1:21:4.76%:31:5E-1:45:20:9:11:22 0/0:0:0:0:0:13:0%:25:1E0:42:13:6:7:17 0/0:38:2:0:2:10:20%:7:2.3684E-1:40:8:5:3:12 0/0:33:1:0:1:19:5.26%:28:5E-1:40:18:5:13:23 0/0:33:1:0:1:11:9.09%:14:5E-1:39:10:4:6:12 0/0:34:2:0:2:17:11.76%:18:2.4242E-1:43:15:2:13:20 0/0:34:1:0:1:13:7.69%:18:5E-1:45:12:3:9:15 0/0:27:2:0:2:20:10%:21:2.4359E-1:43:18:4:14:20 0/0:29:2:0:2:19:10.53%:21:2.4324E-1:38:17:6:11:21 0/0:28:2:0:2:11:18.18%:10:2.381E-1:41:9:2:7:13 0/0:33:1:0:1:11:9.09%:14:5E-1:48:10:2:8:12 0/0:24:3:0:3:16:18.75%:11:1.129E-1:49:13:6:7:20 0/0:37:1:0:1:14:7.14%:17:5E-1:44:13:1:12:14 0/0:31:4:0:4:21:19.05%:15:5.3471E-2:42:17:6:11:21 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:26 0/0:26:2:0:2:17:11.76%:18:2.4242E-1:46:15:4:11:17 0/0:33:2:0:2:20:10%:21:2.4359E-1:39:18:7:11:21 0/0:0:0:0:0:15:0%:29:1E0:46:15:3:12:15 0/0:33:1:0:1:15:6.67%:21:5E-1:42:14:3:11:16 0/0:33:1:0:1:18:5.56%:24:5E-1:41:17:4:13:19 0/0:33:3:0:3:22:13.64%:19:1.1628E-1:40:19:7:12:26 0/0:37:2:0:2:13:15.38%:13:2.4E-1:33:11:6:5:19 0/0:33:1:0:1:11:9.09%:14:5E-1:40:10:5:5:13 0/0:30:3:0:3:21:14.29%:19:1.1585E-1:46:18:6:12:24 0/0:35:2:0:2:15:13.33%:16:2.4138E-1:44:13:5:8:20 0/0:26:2:0:2:28:7.14%:34:2.4545E-1:39:26:10:16:30 0/0:38:1:0:1:31:3.23%:48:5E-1:40:30:14:16:36 0/0:26:2:0:2:22:9.09%:24:2.4419E-1:42:20:6:14:22 0/0:27:2:0:2:15:13.33%:16:2.4138E-1:46:13:3:10:16 0/0:37:2:0:2:16:12.5%:15:2.4194E-1:44:14:5:9:20 0/0:36:2:0:2:20:10%:21:2.4359E-1:39:18:7:11:20 0/0:30:5:0:5:20:25%:10:2.3562E-2:40:15:6:9:21 0/0:36:1:0:1:16:6.25%:21:5E-1:38:15:5:10:21 0/0:35:2:0:2:19:10.53%:21:2.4324E-1:40:17:7:10:19 0/0:39:1:0:1:20:5%:27:5E-1:39:19:4:15:24 0/0:34:4:0:4:16:25%:8:5.0612E-2:38:12:5:7:19 0/0:36:1:0:1:17:5.88%:24:5E-1:40:16:3:13:17 0/0:34:3:0:3:17:17.65%:14:1.1364E-1:43:14:3:11:17 0/0:0:0:0:0:13:0%:25:1E0:42:13:4:9:19 0/0:35:3:0:3:16:18.75%:11:1.129E-1:40:13:4:9:20 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:15 0/0:33:3:0:3:23:13.04%:22:1.1667E-1:42:20:5:15:26 0/0:32:5:0:5:27:18.52%:19:2.5527E-2:40:22:6:16:31 0/0:37:1:0:1:16:6.25%:21:5E-1:39:15:7:8:20 0/0:27:4:0:4:23:17.39%:18:5.4264E-2:40:19:7:12:26 0/0:35:3:0:3:17:17.65%:14:1.1364E-1:37:14:7:7:19 0/0:29:3:0:3:24:12.5%:22:1.1702E-1:44:21:8:13:29 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:22 0/1:29:8:0:8:27:29.63%:26:2.1337E-3:37:19:5:14:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:4:19:27 0/0:20:2:0:2:28:7.14%:34:2.4545E-1:41:26:9:17:31 0/0:0:0:0:0:7:0%:14:1E0:45:7:2:5:10 0/0:28:2:0:2:14:14.29%:12:2.4074E-1:44:12:4:8:17 0/0:31:3:0:3:24:12.5%:22:1.1702E-1:43:21:9:12:27 0/0:36:4:0:4:30:13.33%:26:5.62E-2:41:26:8:18:33 0/0:35:1:0:1:13:7.69%:18:5E-1:38:12:2:10:14 MTB_anc 809416 . A G . PASS AC=124;AF=0.413;AN=300;ANN=G|missense_variant|MODERATE|Rv0712_Rv0712|gene733|transcript|Transcript_gene733|Coding|1/1|c.671A>G|p.Glu224Gly|671/900|671/900|224/299||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.809416A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.809416A>G||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:52:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:10:0%:17:1E0:40:10:5:5:11 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:22 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:27 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:31 1/1:41:49:28:21:50:98%:99:5.0549E-28:60:1:1:0:50 1/1:52:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:50:26:24:51:98.04%:99:1.3013E-28:39:1:1:0:51 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:36 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:31 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:38:1:1:0:26:3.85%:38:5E-1:47:25:16:9:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 1/1:42:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:26:12:38 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:18:0%:32:1E0:44:18:13:5:18 1/1:45:31:14:17:32:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:39 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:30 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:60:28:32:60:100%:99:1.035E-35:0:0:0:0:60 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 1/1:45:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:51 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 1/1:47:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:31 0/0:38:1:0:1:45:2.22%:73:5E-1:47:44:24:20:47 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:31 1/1:47:22:9:13:23:95.65%:99:2.9149E-12:39:1:1:0:23 1/1:48:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:35 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:31 1/1:43:18:11:7:19:94.74%:92:5.6585E-10:38:1:1:0:19 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:31:13:18:32:96.88%:99:1.8007E-17:36:1:0:1:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:42 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:17:8:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:35 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:24 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:30 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:39:1:0:1:33:3.03%:52:5E-1:45:32:14:18:34 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:22 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:23 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:28 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:37 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:41 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:44 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:28 0/0:0:0:0:0:21:0%:40:1E0:38:21:14:7:23 0/0:0:0:0:0:58:0%:99:1E0:42:58:29:29:59 0/0:0:0:0:0:59:0%:99:1E0:43:59:25:34:61 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:20:7:29 0/0:0:0:0:0:47:0%:89:1E0:37:47:27:20:51 0/0:0:0:0:0:43:0%:82:1E0:37:43:26:17:45 0/0:0:0:0:0:42:0%:77:1E0:39:42:25:17:45 0/0:0:0:0:0:48:0%:89:1E0:38:48:23:25:50 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:44 0/0:0:0:0:0:39:0%:74:1E0:36:39:18:21:43 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:40 0/0:0:0:0:0:29:0%:55:1E0:35:29:20:9:34 0/0:0:0:0:0:53:0%:99:1E0:37:53:26:27:58 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:38 0/0:0:0:0:0:10:0%:17:1E0:39:10:5:5:10 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:27 1/1:38:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:39 0/0:0:0:0:0:42:0%:77:1E0:42:42:13:29:42 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:28 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:37 0/0:0:0:0:0:19:0%:37:1E0:41:19:14:5:20 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:41 1/1:41:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 815236 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|rplO_Rv0723|gene744|transcript|Transcript_gene744|Coding|1/1|c.47C>T|p.Thr16Ile|47/441|47/441|16/146||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.815236C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.815236C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:53:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:48:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:21:14:7:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:50:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:63:31:32:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:48:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:53:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:39:19:20:40:97.5%:99:3.8137E-22:39:1:1:0:40 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:50:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:50:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:66:39:27:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:42:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:45 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:48 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:66:33:33:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 MTB_anc 815851 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|sppA_Rv0724|gene745|transcript|Transcript_gene745|Coding|1/1|c.189G>A|p.Arg63Arg|189/1872|189/1872|63/623||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.815851G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.815851G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.815851G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:32:12:20:33:96.97%:99:4.7095E-18:38:1:1:0:33 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:60:23:37:60:100%:99:1.035E-35:0:0:0:0:61 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:52 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 820084 . G A . PASS AC=272;AF=1.00;AN=272;ANN=A|missense_variant|MODERATE|fucA_Rv0727c|gene748|transcript|Transcript_gene748|Coding|1/1|c.416C>T|p.Pro139Leu|416/657|416/657|139/218||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.820084G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.820084G>A||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:8:7:1:8:100%:41:7.77E-5:0:0:0:0:10 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:14 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:18 1/1:34:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:15 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:11 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:11 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:25 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:32:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 MTB_anc 820752 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|serA2_Rv0728c|gene749|transcript|Transcript_gene749|Coding|1/1|c.725A>G|p.His242Arg|725/981|725/981|242/326||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.820752T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.820752T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:52:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:53:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:24:15:9:25:96%:99:3.101E-14:0:0:0:0:25 1/1:45:16:10:6:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:51:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:36:15:21:37:97.3%:99:2.2598E-21:0:0:0:0:39 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:36:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 821907 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|xylB_Rv0729|gene750|transcript|Transcript_gene750|Coding|1/1|c.401C>T|p.Pro134Leu|401/1347|401/1347|134/448||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.821907C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.821907C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:40:12:28:41:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 822018 . C A . PASS AC=68;AF=0.227;AN=300;ANN=A|missense_variant|MODERATE|xylB_Rv0729|gene750|transcript|Transcript_gene750|Coding|1/1|c.512C>A|p.Thr171Lys|512/1347|512/1347|171/448||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.822018C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.822018C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:49 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:18 0/0:0:0:0:0:45:0%:85:1E0:44:45:27:18:45 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:20 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:19:0%:37:1E0:46:19:14:5:19 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:24:0%:44:1E0:40:24:18:6:25 0/0:0:0:0:0:11:0%:22:1E0:49:11:5:6:11 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:50 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 1/1:44:21:11:10:22:95.45%:99:1.0931E-11:34:1:1:0:23 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:16 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:47 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:8:21:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:33 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:27 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:37:1:1:0:35:2.86%:55:5E-1:42:34:18:16:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:45 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:32 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:32 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:52:0%:96:1E0:43:52:31:21:53 0/0:0:0:0:0:53:0%:99:1E0:39:53:23:30:53 0/0:30:1:1:0:31:3.23%:48:5E-1:46:30:19:11:34 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:40 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:44:19:25:45:97.78%:99:4.4304E-25:37:1:0:1:45 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:50:19:31:51:98.04%:99:9.9117E-30:0:0:0:0:52 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:19:0%:37:1E0:46:19:6:13:19 0/0:0:0:0:0:44:0%:81:1E0:41:44:18:26:45 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:20 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:62:28:34:63:98.41%:99:1.0605E-35:33:1:1:0:65 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:30:0%:55:1E0:47:30:20:10:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:45 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:14:26:40 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:19 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:21:0%:40:1E0:50:21:11:10:22 0/0:0:0:0:0:51:0%:97:1E0:40:51:23:28:52 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:56:0%:99:1E0:43:56:27:29:57 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:41 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:42:0%:77:1E0:36:42:18:24:42 0/0:0:0:0:0:49:0%:93:1E0:40:49:20:29:49 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:21 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:26 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:37 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:33 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:23 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:52:0%:96:1E0:39:52:21:31:54 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:46 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:29 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:32:1:1:0:34:2.94%:51:5E-1:42:33:21:12:34 0/0:0:0:0:0:27:0%:52:1E0:37:27:14:13:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:56:0%:99:1E0:43:56:26:30:57 0/0:0:0:0:0:44:0%:81:1E0:39:44:17:27:44 MTB_anc 823290 . C T . PASS AC=10;AF=0.033;AN=300;ANN=T|missense_variant|MODERATE|Rv0730_Rv0730|gene751|transcript|Transcript_gene751|Coding|1/1|c.425C>T|p.Ser142Phe|425/729|425/729|142/242||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.823290C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.823290C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:17:32:50 0/0:0:0:0:0:18:0%:32:1E0:51:18:11:7:20 0/0:0:0:0:0:65:0%:99:1E0:44:65:26:39:66 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:22 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:24 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:20 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:23 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 0/0:36:1:0:1:30:3.33%:44:5E-1:44:29:13:16:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:21 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:8:0%:14:1E0:52:8:2:6:8 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:45 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:22 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:20 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:55:0%:99:1E0:43:55:21:34:57 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:45:0%:85:1E0:47:45:25:20:47 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:20 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:19 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:38 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:38:36:14:22:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:12:25:38 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:55:0%:99:1E0:43:55:23:32:56 0/0:0:0:0:0:41:0%:78:1E0:48:41:17:24:42 0/0:0:0:0:0:50:0%:92:1E0:42:50:23:27:50 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:32 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:38 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:37:29:17:12:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:30 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:45 0/0:0:0:0:0:44:0%:81:1E0:41:44:18:26:44 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:38 0/0:0:0:0:0:15:0%:29:1E0:43:15:10:5:15 0/0:0:0:0:0:40:0%:74:1E0:41:39:20:19:41 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:26 0/0:0:0:0:0:54:0%:99:1E0:40:54:23:31:55 0/0:0:0:0:0:49:0%:93:1E0:40:49:18:31:49 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:40:3:2:1:27:11.11%:28:1.1792E-1:41:24:14:10:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:51 1/1:38:21:8:13:22:95.45%:99:1.0931E-11:60:1:0:1:23 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:12:0%:21:1E0:44:12:5:7:13 0/0:0:0:0:0:12:0%:21:1E0:46:12:3:9:14 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:44 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:20 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:43 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:39:1:0:1:26:3.85%:38:5E-1:46:25:11:14:26 0/0:0:0:0:0:37:0%:70:1E0:37:37:20:17:39 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:31:0%:59:1E0:46:31:22:9:32 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:41 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:21 0/0:0:0:0:0:60:0%:99:1E0:39:60:28:32:62 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:0:0:0:0:54:0%:99:1E0:43:54:22:32:54 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:30 0/0:0:0:0:0:29:0%:55:1E0:38:29:21:8:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:32 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:27 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:21 0/0:0:0:0:0:34:0%:62:1E0:47:34:7:27:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:43 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:38:0%:70:1E0:38:38:20:18:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:34 0/0:0:0:0:0:17:0%:33:1E0:38:17:12:5:20 0/0:0:0:0:0:54:0%:99:1E0:38:54:26:28:56 0/0:0:0:0:0:43:0%:82:1E0:38:43:25:18:43 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:31 0/0:0:0:0:0:20:0%:36:1E0:38:20:14:6:21 0/0:0:0:0:0:43:0%:82:1E0:41:43:26:17:45 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:33 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:45 0/0:0:0:0:0:34:0%:62:1E0:35:34:20:14:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:41 0/0:0:0:0:0:45:0%:85:1E0:40:45:19:26:46 0/0:0:0:0:0:39:0%:74:1E0:38:39:22:17:39 0/0:0:0:0:0:48:0%:89:1E0:38:48:28:20:50 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:34 0/0:0:0:0:0:47:0%:89:1E0:38:47:24:23:47 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:42:0%:77:1E0:39:42:25:17:44 0/0:0:0:0:0:46:0%:85:1E0:39:46:22:24:49 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:37 0/0:0:0:0:0:37:0%:70:1E0:38:37:22:15:38 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:40 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:54 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:38 MTB_anc 831167 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv0739_Rv0739|gene760|transcript|Transcript_gene760|Coding|1/1|c.313G>A|p.Ala105Thr|313/807|313/807|105/268||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.831167G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.831167G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:56:0%:99:1E0:44:56:27:29:57 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:34:0%:62:1E0:50:34:21:13:36 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:24:0%:44:1E0:49:24:7:17:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:15:23:39 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:21 0/0:0:0:0:0:51:0%:97:1E0:45:51:18:33:52 0/0:0:0:0:0:27:0%:52:1E0:43:27:6:21:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:36:0%:66:1E0:47:36:24:12:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:36 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:50:0%:92:1E0:44:50:17:33:52 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:20:0%:36:1E0:49:20:6:14:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:42:0%:77:1E0:44:42:15:27:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:39 0/0:34:1:1:0:27:3.7%:41:5E-1:47:26:9:17:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:7:18:25 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:33 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:40 0/0:0:0:0:0:46:0%:85:1E0:48:46:26:20:46 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:46 0/0:0:0:0:0:53:0%:99:1E0:43:53:19:34:53 0/0:0:0:0:0:38:0%:70:1E0:42:38:11:27:38 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:47 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:13:27:41 0/0:0:0:0:0:48:0%:89:1E0:46:48:25:23:48 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:44 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:38 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:23 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:42 0/0:0:0:0:0:22:0%:40:1E0:45:22:5:17:22 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:49:0%:93:1E0:45:49:17:32:49 0/0:0:0:0:0:41:0%:78:1E0:47:41:18:23:42 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:43:0%:82:1E0:46:43:17:26:43 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:33 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:46 0/0:0:0:0:0:33:0%:63:1E0:50:33:16:17:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:13:29:42 0/0:0:0:0:0:59:0%:99:1E0:43:59:30:29:60 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:11:26:37 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:16:0%:29:1E0:50:16:10:6:16 0/0:0:0:0:0:31:0%:59:1E0:46:31:11:20:32 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:49:0%:93:1E0:48:49:21:28:50 0/1:46:17:8:9:21:80.95%:78:1.2848E-8:60:3:3:0:21 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:46:0%:85:1E0:47:46:25:21:46 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:38 0/0:60:1:0:1:20:5%:27:5E-1:53:19:14:5:20 0/0:0:0:0:0:53:0%:99:1E0:39:53:20:33:54 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:27:0%:52:1E0:44:27:7:20:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:7:15:22 0/0:0:0:0:0:38:0%:70:1E0:42:38:26:12:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:8:21:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:44:20:5:15:20 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:47:0%:89:1E0:43:47:17:30:47 0/0:0:0:0:0:36:0%:66:1E0:43:36:12:24:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:38 0/0:0:0:0:0:52:0%:96:1E0:39:52:27:25:52 0/0:0:0:0:0:45:0%:85:1E0:39:45:18:27:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:66:0%:99:1E0:42:66:31:35:66 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:51 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:20:0%:36:1E0:41:20:18:2:24 0/0:0:0:0:0:57:0%:99:1E0:38:57:29:28:58 0/0:0:0:0:0:46:0%:85:1E0:41:46:18:28:50 0/0:0:0:0:0:46:0%:85:1E0:41:46:17:29:48 0/0:0:0:0:0:37:0%:70:1E0:36:37:14:23:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:51 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:43 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:52 0/0:0:0:0:0:27:0%:52:1E0:38:27:6:21:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:83:0%:99:1E0:39:83:34:49:87 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:45 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:43 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:49:0%:93:1E0:43:49:19:30:50 0/0:0:0:0:0:44:0%:81:1E0:40:44:15:29:45 0/0:0:0:0:0:18:0%:32:1E0:46:18:6:12:18 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:40 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:50 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 MTB_anc 832201 . T C . PASS AC=296;AF=1.00;AN=296;ANN=C|synonymous_variant|LOW|Rv0740_Rv0740|gene761|transcript|Transcript_gene761|Coding|1/1|c.426T>C|p.Asp142Asp|426/528|426/528|142/175||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.832201T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.832201T>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:64:27:37:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:49:31:18:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:39:25:14:40:97.5%:99:3.8137E-22:38:1:1:0:40 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 832246 . G A . PASS AC=298;AF=1.00;AN=298;ANN=A|synonymous_variant|LOW|Rv0740_Rv0740|gene761|transcript|Transcript_gene761|Coding|1/1|c.471G>A|p.Gln157Gln|471/528|471/528|157/175||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.832246G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.832246G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:52:26:26:53:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:34:21:13:35:97.14%:99:3.2089E-19:24:1:0:1:36 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:52:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:51:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:44:28:16:45:97.78%:99:4.4304E-25:38:1:1:0:45 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 832708 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.832708A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.832708A>C||||||,C|intergenic_region|MODIFIER|Rv0740_Rv0740-Rv0742_Rv0742|gene761-gene762|intergenic_region|gene761-gene762|||n.832708A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:14:11:26:96.15%:99:5.4444E-14:34:1:1:0:26 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:53:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:51:34:15:19:35:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:22:12:10:23:95.65%:99:2.9149E-12:36:1:1:0:23 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:33:18:15:34:97.06%:99:1.2301E-18:25:1:1:0:35 1/1:47:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:12:17:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:26:14:12:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:47:19:28:48:97.92%:99:7.6145E-27:38:1:0:1:50 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:23:9:14:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:16:11:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:43:21:22:44:97.73%:99:1.7144E-24:60:1:1:0:45 1/1:42:27:14:13:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:16:20:37:97.3%:99:2.1762E-20:37:1:0:1:39 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:15:21:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:57:27:30:58:98.28%:99:9.6072E-33:37:1:0:1:60 1/1:42:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:43:22:21:44:97.73%:99:1.7144E-24:60:1:0:1:44 1/1:37:35:15:20:36:97.22%:99:8.3613E-20:60:1:1:0:37 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:9:17:28:92.86%:99:5.6872E-14:37:2:2:0:28 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:63:34:29:64:98.44%:99:2.7139E-36:37:1:0:1:65 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 832808 . C G . PASS AC=4;AF=0.013;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.832808C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.832808C>G||||||,G|intergenic_region|MODIFIER|Rv0740_Rv0740-Rv0742_Rv0742|gene761-gene762|intergenic_region|gene761-gene762|||n.832808C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:39 0/0:0:0:0:0:26:0%:47:1E0:51:26:12:14:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:44 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:47:0%:89:1E0:50:47:29:18:48 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:28:0%:51:1E0:52:28:11:17:30 0/0:0:0:0:0:28:0%:51:1E0:51:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:54:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:9:21:30 0/0:0:0:0:0:20:0%:36:1E0:52:20:9:11:21 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:41 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:23 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:29 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:39 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:43 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:20:0%:36:1E0:44:20:5:15:22 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:31 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:28 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:36 0/0:0:0:0:0:66:0%:99:1E0:47:66:36:30:67 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:44 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:38 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:9:23:32 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:23 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:38 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:24 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:51 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:37 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:14 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:29 0/0:0:0:0:0:23:0%:44:1E0:50:23:17:6:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:26 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:47 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:55:0%:99:1E0:46:55:24:31:57 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:20 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:47 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:18 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:28 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:40 0/0:60:1:1:0:39:2.56%:62:5E-1:51:38:14:24:39 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:44 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:34 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:45 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:45 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:23 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:37 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:19 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:27:0%:52:1E0:50:27:13:14:27 0/0:0:0:0:0:51:0%:92:1E0:40:50:22:28:51 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:47:0%:89:1E0:43:47:17:30:47 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:47:0%:89:1E0:44:47:16:31:48 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:47 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:10:21:32 0/0:0:0:0:0:38:0%:70:1E0:39:38:27:11:40 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:48:0%:89:1E0:46:48:22:26:48 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:47 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:39 0/0:0:0:0:0:42:0%:77:1E0:42:42:16:26:43 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:12:26:39 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:38 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:37 0/0:0:0:0:0:51:0%:97:1E0:46:51:26:25:53 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 0/0:0:0:0:0:65:0%:99:1E0:42:65:40:25:66 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:25 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:22 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:48 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:37 0/0:36:1:1:0:39:2.56%:62:5E-1:41:38:16:22:43 0/0:0:0:0:0:44:0%:81:1E0:37:44:20:24:45 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:47 0/0:0:0:0:0:28:0%:51:1E0:41:28:8:20:30 0/0:0:0:0:0:46:0%:85:1E0:41:46:17:29:48 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:41 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:32 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:63:0%:99:1E0:38:63:33:30:64 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:36 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:20 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:69:0%:99:1E0:42:69:35:34:69 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:43 MTB_anc 836414 . G C . PASS AC=211;AF=0.986;AN=214;ANN=C|synonymous_variant|LOW|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.714G>C|p.Gly238Gly|714/2352|714/2352|238/783||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.836414G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.836414G>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:30:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:11 1/1:32:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 0/1:30:8:2:6:9:88.89%:36:2.0568E-4:60:1:0:1:10 1/1:33:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:33:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:8:3:5:8:100%:41:7.77E-5:0:0:0:0:14 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:33:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:35:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:33:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:33:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:14 0/1:34:8:2:6:9:88.89%:36:2.0568E-4:38:1:1:0:10 1/1:33:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:35:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:33:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:32:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:32:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:12:3:9:12:100%:64:3.698E-7:0:0:0:0:16 1/1:32:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:35:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:30 1/1:33:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:33:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:34:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:23 1/1:33:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:33:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:35:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:33:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 0/1:35:10:2:8:12:83.33%:47:1.7011E-5:24:1:0:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:33:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:21 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:33:12:5:7:12:100%:64:3.698E-7:0:0:0:0:16 1/1:34:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:23:3:20:23:100%:99:1.2146E-13:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:33:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:14 1/1:32:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:33:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:31:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:30:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:32:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:32:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:32:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:32:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:32:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:32:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 MTB_anc 836416 . G C . PASS AC=218;AF=0.991;AN=220;ANN=C|missense_variant|MODERATE|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.716G>C|p.Gly239Ala|716/2352|716/2352|239/783||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.836416G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.836416G>C||||||;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:21:7:14:22:95.45%:99:1.8578E-12:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:12:1:11:12:100%:64:3.698E-7:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:32:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:32:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:32:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:30:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:21 0/1:30:7:1:6:8:87.5%:35:2.9138E-4:0:0:0:0:12 1/1:34:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:34:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:31:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:14 1/1:35:14:4:10:15:93.33%:76:2.4927E-8:0:0:0:0:18 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:33:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:34:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:33:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:31:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:34:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:33:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:14 0/1:34:8:2:6:9:88.89%:41:7.77E-5:0:0:0:0:11 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:34:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:31:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:32:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:13 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:33:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:33:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:31:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:33:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:32:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:32:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:31:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:14 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:32:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:33:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 1/1:31:12:5:7:12:100%:64:3.698E-7:0:0:0:0:16 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:35:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:17 1/1:33:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:16 1/1:31:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:32:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:19 1/1:34:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:33:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:32:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:12 1/1:32:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:32:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:30:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:33:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:32:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:12:3:9:12:100%:64:3.698E-7:0:0:0:0:15 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:33:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:33:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:34:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:32:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:17 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 MTB_anc 837070 . A T . PASS AC=276;AF=1.00;AN=276;ANN=T|missense_variant|MODERATE|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.1370A>T|p.Gln457Leu|1370/2352|1370/2352|457/783||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.837070A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.837070A>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:52:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:45:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:51:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:51:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:49:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:54:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:50:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:52:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:48:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:54:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:51:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:50:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:13:9:4:14:92.86%:64:3.7391E-7:37:1:0:1:14 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:52:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:49:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:53:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:58:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 MTB_anc 837218 . G C . PASS AC=138;AF=1.00;AN=138;ANN=C|synonymous_variant|LOW|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.1518G>C|p.Gly506Gly|1518/2352|1518/2352|506/783||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.837218G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.837218G>C||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:15 1/1:34:23:2:21:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:31:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:31:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:33:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:31:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 837220 . T C . PASS AC=138;AF=1.00;AN=138;ANN=C|missense_variant|MODERATE|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.1520T>C|p.Val507Ala|1520/2352|1520/2352|507/783||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.837220T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.837220T>C||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./. 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:33:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:33:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:32:12:3:9:12:100%:64:3.698E-7:0:0:0:0:15 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:33:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 837223 . G C . PASS AC=147;AF=0.993;AN=148;ANN=C|missense_variant|MODERATE|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.1523G>C|p.Gly508Ala|1523/2352|1523/2352|508/783||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.837223G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.837223G>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./. 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:8:4:4:9:88.89%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:18:5:13:18:94.74%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 837293 . G C . PASS AC=130;AF=1.00;AN=130;ANN=C|synonymous_variant|LOW|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.1593G>C|p.Ala531Ala|1593/2352|1593/2352|531/783||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.837293G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.837293G>C||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:12:5:7:13:100%:64:3.698E-7:0:0:0:0:14 1/1:35:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:14 1/1:33:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 837331 . CTTCCGAT C . PASS AC=67;AF=0.620;AN=108;ANN=C|frameshift_variant|HIGH|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.1632_1638delTTCCGAT|p.Ser545fs|1632/2352|1632/2352|544/783||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.837332_837338delTTCCGAT||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.837332_837338delTTCCGAT||||||;LOF=(PE_PGRS9_Rv0746|gene766|1|1.00);set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:10:2:8:13:76.92%:42:5.3843E-5:36:3:0:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:8:0:8:9:88.89%:36:2.0568E-4:38:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:28:7:0:7:7:77.78%:29:1.1312E-3:38:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:0:6:7:85.71%:26:2.331E-3:35:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:7:0:7:9:77.78%:29:1.1312E-3:33:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:32:6:1:5:8:66.67%:23:4.5249E-3:36:3:1:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:31:11:0:11:11:91.67%:53:4.8074E-6:34:1:0:1:12 0/1:33:9:0:9:10:81.82%:39:1.1057E-4:35:2:1:1:12 0/1:32:8:2:6:11:61.54%:30:8.238E-4:36:5:2:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:34:12:0:12:13:85.71%:55:2.9913E-6:32:2:1:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:29:9:0:9:7:100%:46:2.0568E-5:0:0:0:0:9 0/1:32:6:0:6:9:60%:22:5.418E-3:38:4:2:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:35:16:0:16:17:94.12%:81:7.7134E-9:33:1:0:1:17 0/1:36:8:0:8:9:88.89%:36:2.0568E-4:38:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:29:14:1:13:15:77.78%:63:4.8851E-7:33:3:0:3:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. 0/1:34:8:2:6:10:80%:34:3.5723E-4:38:2:1:1:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:8:0:8:17:47.06%:28:1.3389E-3:35:9:5:4:18 0/1:31:7:0:7:7:87.5%:31:6.993E-4:33:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:7:0:7:8:87.5%:31:6.993E-4:38:1:0:1:8 0/1:35:8:0:8:11:72.73%:32:5.16E-4:34:3:1:2:11 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 0/1:36:6:2:4:8:75%:24:3.4965E-3:35:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:3:6:9:90%:42:5.9538E-5:38:1:0:1:12 0/1:34:10:1:9:11:83.33%:44:3.3652E-5:35:2:0:2:12 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 0/1:38:8:1:7:9:88.89%:36:2.0568E-4:32:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:33:12:2:10:13:85.71%:55:2.9913E-6:38:2:0:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:31:7:0:7:8:77.78%:29:1.1312E-3:33:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:32:8:2:6:7:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:35:15:2:13:16:93.75%:75:2.8282E-8:34:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:30:11:0:11:11:91.67%:53:4.8074E-6:36:1:0:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:32:9:1:8:12:75%:37:1.6826E-4:30:3:2:1:12 0/1:35:13:1:12:15:86.67%:60:8.7675E-7:35:2:0:2:15 0/1:31:14:1:13:16:87.5%:65:2.5454E-7:34:2:0:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 1/1:36:12:3:9:13:92.31%:58:1.3461E-6:34:1:0:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:14:1:13:18:77.78%:60:8.0605E-7:33:4:1:3:19 0/1:34:16:0:16:23:69.57%:66:2.4726E-7:34:7:3:4:24 0/1:32:8:1:7:12:66.67%:31:6.7304E-4:36:4:0:4:12 1/1:32:18:2:16:17:94.74%:92:5.6585E-10:33:1:1:0:20 0/1:32:8:0:8:12:61.54%:30:8.238E-4:34:5:1:4:13 0/1:35:11:1:10:14:78.57%:47:1.6951E-5:32:3:2:1:14 1/1:29:12:0:12:11:92.31%:58:1.3461E-6:30:1:0:1:13 0/1:32:12:0:12:13:85.71%:55:2.9913E-6:34:2:0:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:13:0:13:17:76.47%:55:2.5647E-6:33:4:2:2:17 0/1:36:6:0:6:7:85.71%:26:2.331E-3:32:1:1:0:7 0/1:35:8:2:6:9:88.89%:36:2.0568E-4:38:1:0:1:9 0/1:33:11:3:8:12:84.62%:49:1.0096E-5:38:2:0:2:14 1/1:32:14:0:14:13:100%:76:2.4927E-8:0:0:0:0:14 0/0:36:5:0:5:13:38.46%:4:1.9565E-2:33:8:1:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:33:7:0:7:8:87.5%:31:6.993E-4:30:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:29:7:1:6:7:77.78%:29:1.1312E-3:35:2:2:0:9 0/1:33:7:1:6:10:70%:28:1.548E-3:36:3:2:1:10 0/1:37:10:2:8:12:83.33%:44:3.3652E-5:35:2:1:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. MTB_anc 837340 . G GGCGGGGC . PASS AC=95;AF=0.990;AN=96;ANN=GGCGGGGC|frameshift_variant|HIGH|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.1640_1641insGCGGGGC|p.Gly548fs|1641/2352|1641/2352|547/783||,GGCGGGGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.837340_837341insGCGGGGC||||||,GGCGGGGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.837340_837341insGCGGGGC||||||;LOF=(PE_PGRS9_Rv0746|gene766|1|1.00);WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:8:0:8:7:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:14:1:13:15:93.33%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:8:0:8:7:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 0/1:40:8:1:7:9:88.89%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:1:8:10:90%:46:2.0568E-5:0:0:0:0:10 1/1:37:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:14:1:13:14:93.33%:69:1.0315E-7:37:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./. 1/1:37:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:16:0:16:17:94.12%:87:1.6637E-9:0:0:0:0:18 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. MTB_anc 837911 . G T . PASS AC=260;AF=0.992;AN=262;ANN=T|synonymous_variant|LOW|PE_PGRS9_Rv0746|gene766|transcript|Transcript_gene766|Coding|1/1|c.2211G>T|p.Gly737Gly|2211/2352|2211/2352|737/783||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.837911G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.837911G>T||||||;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:30:2:28:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:25 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:20 1/1:37:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:35:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:19 1/1:36:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:33:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:37:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:35:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:9:2:7:10:90%:42:5.9538E-5:56:1:0:1:10 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:26 1/1:35:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:34 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:16 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:23 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:19 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:31:4:27:31:100%:99:2.1486E-18:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:19 1/1:33:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:20 0/1:36:7:1:6:8:87.5%:31:6.993E-4:25:1:1:0:9 1/1:37:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:35:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:36:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:35:10:0:10:11:90.91%:47:1.7011E-5:30:1:1:0:15 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:11 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:15 1/1:39:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:34:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:37:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:32:7:25:33:96.97%:99:4.7095E-18:30:1:1:0:37 1/1:37:25:2:23:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:25:3:22:26:96.15%:99:5.4444E-14:30:1:1:0:28 1/1:35:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:36:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:20 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:21 1/1:35:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:24:5:19:24:100%:99:3.101E-14:0:0:0:0:26 1/1:35:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 0/1:35:8:1:7:9:88.89%:36:2.0568E-4:26:1:1:0:10 1/1:34:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:21 1/1:35:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:34:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:35:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:18:4:14:19:94.74%:92:5.6585E-10:31:1:1:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:14 MTB_anc 840361 . C A . PASS AC=2;AF=0.014;AN=144;ANN=A|synonymous_variant|LOW|PE_PGRS10_Rv0747|gene767|transcript|Transcript_gene767|Coding|1/1|c.1911C>A|p.Gly637Gly|1911/2406|1911/2406|637/801||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.840361C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.840361C>A||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:13:0%:25:1E0:37:13:4:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:36:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:14 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:9 0/0:0:0:0:0:9:0%:18:1E0:38:9:6:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:11 0/0:0:0:0:0:12:0%:21:1E0:38:12:1:11:12 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:11 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:8 0/0:37:1:0:1:11:9.09%:14:5E-1:36:10:3:7:13 0/0:0:0:0:0:13:0%:25:1E0:39:13:4:9:13 0/0:0:0:0:0:10:0%:17:1E0:40:10:1:9:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:13:0%:25:1E0:35:13:4:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:37:14:4:10:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:41:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:15 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:9 0/0:0:0:0:0:9:0%:18:1E0:45:9:4:5:10 0/0:0:0:0:0:9:0%:18:1E0:35:9:1:8:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:8 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:37:7:1:6:7 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:10 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:21 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:9 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:8:0%:14:1E0:38:8:3:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:8:0%:14:1E0:40:8:1:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:39:8:4:4:8 0/0:0:0:0:0:14:0%:25:1E0:35:14:5:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:34:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:17:0%:33:1E0:35:17:6:11:17 0/0:0:0:0:0:12:0%:21:1E0:34:12:3:9:12 0/0:0:0:0:0:8:0%:14:1E0:42:8:2:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:9 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:9:0%:18:1E0:40:9:5:4:9 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:7 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:39:7:2:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:37:8:1:7:9 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:8 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:8 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:13 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:8 0/0:0:0:0:0:14:0%:25:1E0:39:14:2:12:14 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:10 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:18 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:11 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:39:7:3:4:9 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:10 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 0/0:0:0:0:0:7:0%:14:1E0:32:7:0:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:7 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:7 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:16 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 0/0:0:0:0:0:7:0%:14:1E0:33:7:3:4:7 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 840858 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|PE_PGRS10_Rv0747-vapB31_Rv0748|gene767-gene768|intergenic_region|gene767-gene768|||n.840858C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:16:10:6:17:94.12%:87:1.6637E-9:0:0:0:0:18 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:33:16:17:34:97.06%:99:1.2301E-18:38:1:1:0:34 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:34:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:34:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:25:9:16:26:96.15%:99:5.4444E-14:38:1:1:0:26 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 841448 . C A . PASS AC=68;AF=0.227;AN=300;ANN=A|missense_variant|MODERATE|vapC31_Rv0749|gene769|transcript|Transcript_gene769|Coding|1/1|c.221C>A|p.Thr74Asn|221/429|221/429|74/142||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.841448C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.841448C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:42:48:31:17:48 0/0:0:0:0:0:18:0%:32:1E0:51:18:10:8:18 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:36:1:1:0:25:4%:38:5E-1:44:24:16:8:25 0/0:0:0:0:0:39:0%:74:1E0:49:39:27:12:39 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:42:0%:77:1E0:48:42:28:14:42 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:25:10:35 0/0:0:0:0:0:24:0%:44:1E0:51:24:12:12:24 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:36 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:44 0/0:33:1:0:1:33:3.03%:52:5E-1:44:32:13:19:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:18:8:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:24:11:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:24:12:37 0/0:0:0:0:0:56:0%:99:1E0:44:56:37:19:56 1/1:45:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 1/1:44:43:30:13:44:97.73%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:18:0%:32:1E0:41:18:13:5:18 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:21:10:31 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:41:0%:78:1E0:40:41:35:6:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:22:10:32 0/0:0:0:0:0:28:0%:51:1E0:49:28:16:12:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:22:7:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:18 0/0:0:0:0:0:38:0%:70:1E0:43:38:26:12:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:35 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:23:11:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:24:13:37 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:44 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:57:0%:99:1E0:45:57:33:24:57 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:24:10:34 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:21 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:31:0%:59:1E0:50:31:14:17:31 0/0:0:0:0:0:42:0%:77:1E0:37:42:28:14:43 0/0:60:1:1:0:30:3.33%:44:5E-1:42:29:13:16:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:21:9:30 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:38:1:0:1:34:2.94%:51:5E-1:43:33:21:12:34 0/0:38:1:1:0:37:2.7%:59:5E-1:42:36:20:16:37 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:20 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:27 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:46:0%:85:1E0:39:46:26:20:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:34:1:0:1:49:2.04%:80:5E-1:42:48:33:15:49 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:24 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:24:10:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:26:13:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:31:9:40 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:19 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:20:11:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:27:12:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:21:10:31 1/1:40:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:36:0%:66:1E0:42:36:27:9:36 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:24:8:32 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:23 0/0:0:0:0:0:57:0%:99:1E0:43:57:32:25:57 0/0:0:0:0:0:62:0%:99:1E0:39:62:44:18:64 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:40:0%:74:1E0:37:40:26:14:42 1/1:38:40:32:8:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:55:37:18:55:100%:99:1.0149E-32:0:0:0:0:55 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 1/1:45:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:47:0%:89:1E0:40:47:32:15:47 0/0:0:0:0:0:36:0%:66:1E0:36:36:21:15:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:35 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:42 0/0:0:0:0:0:23:0%:44:1E0:41:23:17:6:25 0/0:0:0:0:0:45:0%:85:1E0:44:45:33:12:46 0/0:0:0:0:0:44:0%:81:1E0:40:44:30:14:44 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:31 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:32:0%:59:1E0:40:32:21:11:32 1/1:45:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:24 0/0:0:0:0:0:45:0%:85:1E0:42:45:28:17:47 0/0:0:0:0:0:51:0%:97:1E0:41:51:34:17:51 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:30 MTB_anc 841473 . G A . PASS AC=68;AF=0.227;AN=300;ANN=A|synonymous_variant|LOW|vapC31_Rv0749|gene769|transcript|Transcript_gene769|Coding|1/1|c.246G>A|p.Thr82Thr|246/429|246/429|82/142||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.841473G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.841473G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:49 0/0:0:0:0:0:15:0%:29:1E0:52:15:7:8:15 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:22:0%:40:1E0:43:22:16:6:22 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:30 0/0:0:0:0:0:35:0%:67:1E0:47:35:26:9:35 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:45:0%:85:1E0:46:45:31:14:45 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:27:11:40 0/0:0:0:0:0:26:0%:47:1E0:50:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:49:0%:93:1E0:40:49:22:27:49 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:35:0%:67:1E0:45:35:24:11:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:24:11:35 0/0:0:0:0:0:58:0%:99:1E0:45:58:38:20:58 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:36 1/1:42:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:16 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:30 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:38:1:0:1:34:2.94%:51:5E-1:43:33:23:10:34 0/0:0:0:0:0:41:0%:78:1E0:38:41:34:7:42 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:33 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:39 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:38:1:0:1:35:2.86%:55:5E-1:43:34:26:8:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:43:0%:82:1E0:40:43:27:16:43 0/0:0:0:0:0:30:0%:55:1E0:43:30:21:9:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:54:0%:99:1E0:44:54:30:24:55 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:38:1:0:1:15:6.67%:21:5E-1:48:14:7:7:15 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:30 0/0:0:0:0:0:36:0%:67:1E0:44:35:24:11:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:21 0/0:0:0:0:0:33:0%:63:1E0:50:33:14:19:33 0/0:0:0:0:0:37:0%:70:1E0:38:37:24:13:38 0/0:60:1:1:0:31:3.23%:48:5E-1:43:30:14:16:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:22:9:31 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:34 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 1/1:42:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 1/1:43:27:11:16:28:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:44:0%:81:1E0:38:44:23:21:44 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:47:0%:89:1E0:41:47:33:14:47 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:24:8:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:27:11:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 0/0:33:1:1:0:35:2.86%:55:5E-1:41:34:29:5:37 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:18 1/1:40:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:33 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:22:7:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:26:8:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:21:11:32 1/1:42:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:25:8:34 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:46:33:13:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:23:11:34 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 0/0:0:0:0:0:56:0%:99:1E0:42:56:32:24:56 0/0:0:0:0:0:60:0%:99:1E0:39:60:42:18:60 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:29:0%:55:1E0:38:29:20:9:30 0/0:0:0:0:0:44:0%:81:1E0:38:44:28:16:45 1/1:38:36:30:6:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 0/0:0:0:0:0:34:0%:62:1E0:40:34:24:10:34 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 1/1:43:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:43:0%:82:1E0:39:43:31:12:45 0/0:0:0:0:0:35:0%:67:1E0:36:35:22:13:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:21:7:28 0/0:0:0:0:0:42:0%:77:1E0:43:42:30:12:43 0/0:0:0:0:0:44:0%:81:1E0:40:44:29:15:44 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:37 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:26 0/0:0:0:0:0:44:0%:81:1E0:40:44:30:14:44 0/0:38:1:1:0:53:1.89%:88:5E-1:41:52:34:18:53 0/0:0:0:0:0:28:0%:51:1E0:40:28:20:8:28 MTB_anc 841475 . A G . PASS AC=68;AF=0.227;AN=300;ANN=G|missense_variant|MODERATE|vapC31_Rv0749|gene769|transcript|Transcript_gene769|Coding|1/1|c.248A>G|p.Asn83Ser|248/429|248/429|83/142||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.841475A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.841475A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:40:46:28:18:49 0/0:0:0:0:0:16:0%:29:1E0:51:16:8:8:16 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:27:9:36 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:46:0%:85:1E0:47:46:31:15:46 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:39:0%:74:1E0:42:39:27:12:40 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:32 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:49:0%:93:1E0:39:49:22:27:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:26 0/0:30:1:0:1:26:3.85%:38:5E-1:41:25:16:9:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:23:11:35 0/0:0:0:0:0:56:0%:99:1E0:44:56:37:19:58 1/1:44:28:19:9:29:96.55%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:36 1/1:42:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:37 0/0:0:0:0:0:13:0%:25:1E0:43:13:9:4:15 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:30 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:38:1:0:1:34:2.94%:51:5E-1:42:33:23:10:34 0/0:0:0:0:0:40:0%:74:1E0:37:40:33:7:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:29:0%:55:1E0:41:29:20:9:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:21 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:24:10:39 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:26:9:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:43 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:38 0/0:0:0:0:0:56:0%:99:1E0:42:56:32:24:56 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:21 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:32:0%:59:1E0:50:32:14:18:33 0/0:0:0:0:0:37:0%:70:1E0:38:37:24:13:37 0/0:60:1:1:0:30:3.33%:44:5E-1:42:29:14:15:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:23:9:32 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:34 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:38 1/1:42:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 1/1:43:26:10:16:28:92.86%:99:1.4382E-14:38:1:1:0:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:28 0/0:0:0:0:0:44:0%:81:1E0:38:44:23:21:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:48:0%:89:1E0:40:48:34:14:48 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:22 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:24:9:34 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:28:11:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:30:5:37 0/0:0:0:0:0:19:0%:37:1E0:41:19:13:6:19 1/1:41:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:34:0%:62:1E0:39:34:22:12:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:22:7:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:37 0/0:0:0:0:0:33:0%:63:1E0:39:33:25:8:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:32 1/1:41:33:23:10:34:97.06%:99:1.3852E-19:0:0:0:0:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:25:8:33 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:43:31:12:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:34 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:25 0/0:0:0:0:0:57:0%:99:1E0:41:57:33:24:57 0/0:0:0:0:0:58:0%:99:1E0:37:58:41:17:60 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:29:0%:55:1E0:37:29:21:8:31 0/0:0:0:0:0:44:0%:81:1E0:37:44:29:15:47 1/1:38:35:29:6:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:49 0/0:0:0:0:0:32:0%:59:1E0:40:32:22:10:34 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:29:0%:55:1E0:35:29:13:16:31 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:36 1/1:44:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:41:0%:78:1E0:38:41:29:12:45 0/0:0:0:0:0:30:0%:55:1E0:34:30:21:9:34 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:35 0/0:0:0:0:0:39:0%:74:1E0:38:39:23:16:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:21:7:28 0/0:0:0:0:0:41:0%:78:1E0:42:41:29:12:42 0/0:0:0:0:0:44:0%:81:1E0:39:44:29:15:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:32 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:38:0%:70:1E0:38:38:25:13:38 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:29:12:43 0/0:0:0:0:0:53:0%:99:1E0:41:53:36:17:54 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:28 MTB_anc 841482 . T C . PASS AC=68;AF=0.227;AN=300;ANN=C|synonymous_variant|LOW|vapC31_Rv0749|gene769|transcript|Transcript_gene769|Coding|1/1|c.255T>C|p.Gly85Gly|255/429|255/429|85/142||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.841482T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.841482T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:49 0/0:0:0:0:0:16:0%:29:1E0:52:16:8:8:16 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:20:0%:36:1E0:43:20:15:5:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:20:6:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:23:10:34 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 0/0:0:0:0:0:46:0%:85:1E0:46:46:31:15:47 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:30:12:42 0/0:0:0:0:0:25:0%:48:1E0:52:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:37 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:18:8:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:32 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:48 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:38:1:0:1:24:4.17%:34:5E-1:46:23:15:8:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:23:8:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:21:9:31 0/0:0:0:0:0:58:0%:99:1E0:43:58:39:19:59 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:40:36:23:13:36 1/1:42:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:15:0%:29:1E0:42:15:10:5:15 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:27 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:37:1:0:1:31:3.23%:48:5E-1:42:30:21:9:32 0/0:0:0:0:0:42:0%:77:1E0:39:42:34:8:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:39:21:13:8:22 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:38 0/0:60:1:1:0:38:2.63%:58:5E-1:41:37:24:13:38 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:34:0%:62:1E0:41:34:26:8:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:27:15:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:39 0/0:0:0:0:0:52:0%:96:1E0:44:52:28:24:52 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:13:0%:25:1E0:48:13:6:7:13 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:26:11:37 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:21 0/0:0:0:0:0:34:0%:62:1E0:49:34:15:19:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:23:11:36 0/0:60:1:1:0:28:3.57%:41:5E-1:44:27:12:15:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:35 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 1/1:44:25:13:12:26:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:49:0%:93:1E0:40:49:35:14:49 0/0:0:0:0:0:22:0%:40:1E0:39:22:16:6:22 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:23:9:33 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:32 0/0:0:0:0:0:39:0%:74:1E0:41:39:28:11:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:29:4:37 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:18 1/1:39:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:32:0%:59:1E0:40:32:21:11:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:20:10:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:22:8:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:25:8:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:30 1/1:39:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:26:8:34 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:45:33:12:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:37 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:54:0%:99:1E0:41:54:33:21:54 0/0:0:0:0:0:60:0%:99:1E0:38:60:42:18:61 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:31:0%:59:1E0:38:31:23:8:31 0/0:0:0:0:0:40:0%:74:1E0:38:40:25:15:45 1/1:37:36:30:6:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:38:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:32:0%:59:1E0:41:32:22:10:33 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:32:0%:59:1E0:37:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:36 1/1:43:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:44:0%:81:1E0:39:44:32:12:45 0/0:0:0:0:0:30:0%:55:1E0:37:30:21:9:31 0/0:0:0:0:0:34:0%:62:1E0:38:34:20:14:34 0/0:0:0:0:0:40:0%:74:1E0:39:40:24:16:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:22:7:29 0/0:0:0:0:0:40:0%:74:1E0:41:40:28:12:41 0/0:0:0:0:0:45:0%:85:1E0:40:45:29:16:46 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:33 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:23:10:35 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:42:0%:77:1E0:41:42:30:12:42 0/0:0:0:0:0:51:0%:97:1E0:41:51:36:15:53 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:27 MTB_anc 841494 . C G . PASS AC=68;AF=0.227;AN=300;ANN=G|synonymous_variant|LOW|vapC31_Rv0749|gene769|transcript|Transcript_gene769|Coding|1/1|c.267C>G|p.Leu89Leu|267/429|267/429|89/142||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.841494C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.841494C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:41:46:28:18:46 0/0:0:0:0:0:17:0%:33:1E0:53:17:8:9:17 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:23:0%:44:1E0:44:23:17:6:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:21:7:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:24:9:33 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:46:0%:85:1E0:44:46:33:13:46 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:33:1:1:0:27:3.7%:41:5E-1:48:26:12:14:27 0/0:0:0:0:0:40:0%:74:1E0:42:40:29:11:41 0/0:49:2:2:0:22:9.09%:24:2.4419E-1:50:20:12:8:22 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:40 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:46 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:37:1:0:1:23:4.35%:34:5E-1:46:22:15:7:23 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:25 0/0:0:0:0:0:29:0%:51:1E0:40:28:18:10:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:20 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:55:0%:99:1E0:44:55:37:18:56 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:23:13:36 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:14:0%:25:1E0:42:14:9:5:14 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:19:8:27 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:34:1:0:1:34:2.94%:51:5E-1:42:33:24:9:34 0/0:0:0:0:0:43:0%:82:1E0:39:43:35:8:43 0/0:60:1:0:1:31:3.23%:48:5E-1:43:30:18:12:31 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:26:13:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:37 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:26:8:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:46:0%:85:1E0:41:46:28:18:47 0/0:0:0:0:0:31:0%:59:1E0:43:31:21:10:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:39 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:53 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:14 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:28:11:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:23:11:34 0/0:39:1:1:0:28:3.57%:41:5E-1:44:27:11:16:29 0/0:0:0:0:0:21:0%:40:1E0:44:21:5:16:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:31 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:25:12:37 0/0:0:0:0:0:35:0%:67:1E0:39:35:22:13:35 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:45:0%:85:1E0:39:45:24:21:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:51:0%:97:1E0:41:51:38:13:51 0/0:0:0:0:0:19:0%:37:1E0:39:19:14:5:19 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:23:10:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:25:10:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:32:4:36 0/0:0:0:0:0:21:0%:40:1E0:41:21:16:5:21 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:22:8:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:23:8:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:28 1/1:40:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:38:1:1:0:37:2.7%:59:5E-1:41:36:28:8:37 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:27:13:40 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:23 0/0:0:0:0:0:54:0%:99:1E0:42:54:33:21:55 0/0:0:0:0:0:60:0%:99:1E0:38:60:43:17:61 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:21:9:30 0/0:0:0:0:0:44:0%:81:1E0:39:44:27:17:46 1/1:39:37:31:6:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:24:10:34 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 1/1:43:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:43:0%:82:1E0:40:43:31:12:43 0/0:0:0:0:0:30:0%:55:1E0:37:30:22:8:31 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:20:7:27 0/0:0:0:0:0:39:0%:74:1E0:41:39:29:10:39 0/0:0:0:0:0:46:0%:85:1E0:40:46:31:15:46 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:22:9:31 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:44:0%:81:1E0:41:44:32:12:44 0/0:0:0:0:0:51:0%:97:1E0:42:51:34:17:53 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:27 MTB_anc 841495 . A G . PASS AC=68;AF=0.227;AN=300;ANN=G|missense_variant|MODERATE|vapC31_Rv0749|gene769|transcript|Transcript_gene769|Coding|1/1|c.268A>G|p.Met90Val|268/429|268/429|90/142||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.841495A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.841495A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:41:46:28:18:46 0/0:0:0:0:0:17:0%:33:1E0:53:17:8:9:17 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:22:0%:40:1E0:43:22:16:6:23 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:22:7:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:24:10:34 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:46:0%:85:1E0:44:46:33:13:47 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:30:11:41 0/0:49:2:2:0:22:9.09%:24:2.4419E-1:49:20:12:8:22 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:39 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:46 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:38:1:0:1:21:4.76%:31:5E-1:48:20:13:7:21 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:24 0/0:0:0:0:0:27:0%:47:1E0:41:26:17:9:28 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:20 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:56:0%:99:1E0:44:56:37:19:56 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:23:13:36 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:14:0%:25:1E0:42:14:9:5:14 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:28 1/1:45:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:38:1:0:1:34:2.94%:51:5E-1:42:33:24:9:34 0/0:0:0:0:0:43:0%:82:1E0:39:43:35:8:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:30 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:26:13:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:37 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:25:8:34 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:47:0%:89:1E0:41:47:29:18:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:53 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:14 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:25:11:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:22 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:22:11:34 0/0:39:1:1:0:29:3.45%:45:5E-1:43:28:12:16:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:5:16:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:25:12:37 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:35 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:27 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:46:0%:85:1E0:38:46:24:22:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:49:0%:93:1E0:41:49:36:13:50 0/0:0:0:0:0:18:0%:32:1E0:39:18:13:5:18 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:24:10:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:25:10:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:32:4:36 0/0:0:0:0:0:21:0%:40:1E0:41:21:16:5:21 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:47:28:18:10:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:22:9:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:23:8:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:28 1/1:39:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:28:8:37 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:41:31:10:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:27:13:40 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:55:0%:99:1E0:41:55:34:21:56 0/0:0:0:0:0:62:0%:99:1E0:38:62:45:17:62 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:21:9:30 0/0:0:0:0:0:45:0%:85:1E0:38:45:28:17:46 1/1:39:37:31:6:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:45 0/0:0:0:0:0:34:0%:62:1E0:41:34:24:10:35 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:31 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:37 1/1:43:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:42:0%:77:1E0:39:42:30:12:44 0/0:0:0:0:0:32:0%:59:1E0:38:32:23:9:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:31 0/0:0:0:0:0:40:0%:74:1E0:40:40:25:15:40 0/0:0:0:0:0:25:0%:48:1E0:42:25:18:7:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:26:10:38 0/0:0:0:0:0:45:0%:85:1E0:41:45:30:15:46 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:31:0%:59:1E0:40:31:22:9:31 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:26 0/0:0:0:0:0:43:0%:82:1E0:40:43:32:11:44 0/0:0:0:0:0:51:0%:97:1E0:42:51:35:16:53 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:27 MTB_anc 843099 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|mmsB_Rv0751c|gene772|transcript|Transcript_gene772|Coding|1/1|c.133G>T|p.Val45Phe|133/885|133/885|45/294||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.843099C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.843099C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:48:24:24:48:100%:99:1.554E-28:0:0:0:0:51 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:60:31:29:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:43:24:19:44:97.73%:99:1.7144E-24:32:1:1:0:45 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:50:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:35:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:39:17:22:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:37:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:42:18:24:43:97.67%:99:6.6289E-24:60:1:1:0:44 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:38:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 MTB_anc 843801 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|stop_gained|HIGH|fadE9_Rv0752c|gene773|transcript|Transcript_gene773|Coding|1/1|c.614G>A|p.Trp205*|614/1173|614/1173|205/390||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.843801C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.843801C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:38:42:19:23:44 0/0:0:0:0:0:15:0%:29:1E0:42:15:9:6:16 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:47 0/0:0:0:0:0:15:0%:29:1E0:42:15:8:7:17 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:13 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:22 0/0:0:0:0:0:16:0%:29:1E0:40:16:10:6:16 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:40:24:6:18:25 0/0:0:0:0:0:37:0%:70:1E0:37:37:12:25:37 0/0:0:0:0:0:12:0%:21:1E0:40:12:5:7:12 0/0:0:0:0:0:40:0%:74:1E0:37:40:12:28:41 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:25 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:32 0/0:0:0:0:0:14:0%:25:1E0:40:14:8:6:15 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:22 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:21 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:29 0/0:0:0:0:0:45:0%:85:1E0:38:45:14:31:45 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:24 0/0:0:0:0:0:30:0%:55:1E0:36:30:15:15:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:36 0/0:0:0:0:0:18:0%:32:1E0:44:18:5:13:18 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:17:0%:33:1E0:42:17:5:12:17 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:27 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:26:0%:47:1E0:40:26:7:19:26 0/0:0:0:0:0:31:0%:59:1E0:37:31:11:20:31 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:40 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:45:0%:85:1E0:39:45:19:26:47 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:38:34:11:23:34 0/0:0:0:0:0:38:0%:70:1E0:38:38:10:28:38 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:30 0/0:0:0:0:0:24:0%:44:1E0:37:24:7:17:24 0/0:0:0:0:0:15:0%:29:1E0:44:15:6:9:16 0/0:0:0:0:0:34:0%:62:1E0:37:34:11:23:34 0/0:0:0:0:0:38:0%:70:1E0:37:38:15:23:39 0/0:0:0:0:0:27:0%:52:1E0:39:27:7:20:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:39 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:17:0%:33:1E0:40:17:4:13:17 0/0:0:0:0:0:43:0%:82:1E0:37:43:21:22:44 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:17 0/0:0:0:0:0:31:0%:59:1E0:38:31:9:22:32 0/0:0:0:0:0:26:0%:47:1E0:37:26:8:18:26 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:33 0/0:0:0:0:0:51:0%:97:1E0:40:51:23:28:51 0/0:0:0:0:0:21:0%:40:1E0:35:21:6:15:21 0/0:0:0:0:0:39:0%:74:1E0:37:39:9:30:41 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:36:2:1:1:34:5.88%:43:2.4627E-1:39:32:17:15:34 0/0:0:0:0:0:42:0%:77:1E0:37:42:21:21:42 0/0:0:0:0:0:41:0%:78:1E0:38:41:11:30:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:31 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:0:0:0:0:50:0%:92:1E0:37:50:14:36:51 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/1:39:34:20:14:42:80.95%:99:3.1978E-16:40:8:3:5:43 0/0:38:1:1:0:21:4.76%:31:5E-1:41:20:7:13:22 0/0:0:0:0:0:14:0%:25:1E0:41:14:3:11:15 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:42 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:12:0%:21:1E0:41:12:7:5:12 0/0:37:1:0:1:31:3.23%:48:5E-1:41:30:11:19:31 0/0:0:0:0:0:48:0%:89:1E0:37:48:17:31:48 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:24 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:23 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:26 0/0:0:0:0:0:38:0%:70:1E0:39:38:11:27:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:36:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:0:0:0:0:14:0%:25:1E0:38:14:4:10:14 0/0:0:0:0:0:23:0%:44:1E0:40:23:6:17:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:37:1:1:0:33:3.03%:52:5E-1:40:32:17:15:33 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:41 0/0:0:0:0:0:18:0%:32:1E0:39:18:13:5:18 0/0:0:0:0:0:42:0%:77:1E0:37:42:16:26:43 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:16 0/0:0:0:0:0:24:0%:44:1E0:36:24:8:16:24 0/0:0:0:0:0:20:0%:36:1E0:35:20:5:15:20 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:23 0/0:0:0:0:0:13:0%:25:1E0:39:13:6:7:13 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:27:0%:52:1E0:37:27:7:20:29 0/0:0:0:0:0:25:0%:48:1E0:39:25:7:18:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:20 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:27 0/0:0:0:0:0:30:0%:55:1E0:37:30:10:20:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:6:14:21 0/0:0:0:0:0:16:0%:29:1E0:35:16:3:13:17 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:22 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:31 0/0:0:0:0:0:29:0%:55:1E0:37:29:12:17:29 0/0:0:0:0:0:28:0%:51:1E0:36:28:9:19:29 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:24 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:24 0/0:0:0:0:0:54:0%:99:1E0:36:54:22:32:55 0/0:0:0:0:0:52:0%:96:1E0:39:52:25:27:54 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:25 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:14 0/0:0:0:0:0:36:0%:66:1E0:35:36:10:26:38 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:28 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:24 0/0:0:0:0:0:24:0%:44:1E0:36:24:6:18:24 0/0:0:0:0:0:36:0%:66:1E0:36:36:13:23:36 0/0:0:0:0:0:26:0%:47:1E0:36:26:7:19:27 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:30 0/0:0:0:0:0:26:0%:47:1E0:36:26:11:15:26 0/0:0:0:0:0:30:0%:55:1E0:35:30:10:20:32 0/0:0:0:0:0:31:0%:59:1E0:35:31:8:23:31 0/0:0:0:0:0:32:0%:59:1E0:36:32:10:22:32 0/0:0:0:0:0:28:0%:51:1E0:36:28:10:18:31 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:25 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:9:25:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:30 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:6:17:23 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:24 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:28 0/0:0:0:0:0:27:0%:52:1E0:37:27:10:17:27 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:19 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:19 0/0:0:0:0:0:43:0%:82:1E0:38:43:19:24:43 0/0:0:0:0:0:48:0%:89:1E0:38:48:22:26:48 0/0:0:0:0:0:31:0%:59:1E0:38:31:10:21:32 MTB_anc 845514 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|mmsA_Rv0753c|gene774|transcript|Transcript_gene774|Coding|1/1|c.440T>G|p.Ile147Ser|440/1533|440/1533|147/510||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.845514A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.845514A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:43:55:26:29:56 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:50:0%:92:1E0:44:50:20:30:50 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:23 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:34 0/0:0:0:0:0:32:0%:59:1E0:51:32:18:14:33 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:33 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:50:22:13:9:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:39 0/0:0:0:0:0:16:0%:29:1E0:52:16:6:10:16 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:47 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:37:0%:70:1E0:49:37:15:22:41 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:0:0:0:0:44:0%:81:1E0:42:44:16:28:47 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:51:25:17:8:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:18 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:43:0%:82:1E0:44:43:17:26:43 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:43 0/0:0:0:0:0:59:0%:99:1E0:47:59:29:30:60 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:52 0/0:0:0:0:0:60:0%:99:1E0:47:60:32:28:61 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:17:0%:33:1E0:42:17:10:7:17 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:40 0/0:0:0:0:0:42:0%:77:1E0:44:42:14:28:42 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:52:0%:96:1E0:44:52:26:26:52 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:47 0/0:0:0:0:0:52:0%:96:1E0:44:52:24:28:53 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:23 0/0:0:0:0:0:56:0%:99:1E0:43:56:34:22:57 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:48:0%:89:1E0:47:48:29:19:48 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:44 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:22 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:38:0%:70:1E0:49:38:18:20:39 0/0:0:0:0:0:25:0%:48:1E0:53:25:8:17:25 0/0:0:0:0:0:19:0%:37:1E0:51:19:13:6:19 0/0:0:0:0:0:36:0%:66:1E0:47:36:8:28:36 0/0:0:0:0:0:50:0%:92:1E0:42:50:29:21:53 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:37 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:43 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:44 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:49:0%:93:1E0:43:49:30:19:51 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:54:0%:99:1E0:45:54:29:25:56 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:26:14:41 0/0:30:1:0:1:27:3.7%:41:5E-1:40:26:9:17:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:35 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:36 0/0:0:0:0:0:53:0%:99:1E0:44:53:31:22:54 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:43 0/0:0:0:0:0:44:0%:81:1E0:38:44:22:22:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:43 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:29 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:49 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:52 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:34 0/0:0:0:0:0:56:0%:99:1E0:41:56:21:35:61 0/0:0:0:0:0:43:0%:82:1E0:39:43:16:27:45 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:40:0%:74:1E0:37:40:19:21:40 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:42 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:37 0/0:0:0:0:0:44:0%:81:1E0:38:44:14:30:48 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:33 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:49 0/0:0:0:0:0:37:0%:70:1E0:44:37:11:26:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 0/0:0:0:0:0:45:0%:85:1E0:37:45:20:25:46 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:44 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:28 0/0:0:0:0:0:46:0%:85:1E0:39:46:21:25:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:42:0%:77:1E0:42:42:13:29:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:42 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:19 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:41 0/0:0:0:0:0:61:0%:99:1E0:41:61:27:34:61 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:41 MTB_anc 847995 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|PE_PGRS11_Rv0754-PPE12_Rv0755c|gene775-gene776|intergenic_region|gene775-gene776|||n.847995C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:51:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:66:34:32:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:50:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:60:31:29:60:100%:99:1.035E-35:0:0:0:0:64 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:43:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:60:31:29:60:100%:99:1.035E-35:0:0:0:0:60 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:61:26:35:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:54:17:37:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:53:17:36:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:41 MTB_anc 848407 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|PPE12_Rv0755c|gene776|transcript|Transcript_gene776|Coding|1/1|c.1634A>G|p.Lys545Arg|1634/1938|1634/1938|545/645||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.848407T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.848407T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:51:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:37:14:23:38:97.37%:99:5.7269E-22:0:0:0:0:39 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:48:29:19:49:100%:99:1.554E-28:0:0:0:0:49 1/1:46:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:23:12:11:24:95.83%:99:7.7525E-13:60:1:1:0:24 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:66:39:27:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:16:9:7:17:94.12%:81:7.7134E-9:37:1:0:1:17 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:12:15:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:25:11:14:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:14:18:33:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:49:22:27:50:98%:99:3.925E-29:0:0:0:0:51 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:69:31:38:69:100%:99:4.233E-41:0:0:0:0:71 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:10:13:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:41:53:27:26:54:98.15%:99:1.5943E-31:0:0:0:0:54 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:65:40:25:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:41:37:18:19:38:97.37%:99:5.7269E-22:0:0:0:0:38 MTB_anc 850591 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|PPE12_Rv0755c-thrV_Rvnt09|gene776-gene777|intergenic_region|gene776-gene777|||n.850591C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:52:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:52:23:11:12:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:38:21:17:39:97.44%:99:1.4508E-22:0:0:0:0:41 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:47:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:51:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:28:12:16:29:96.55%:99:9.9776E-16:50:1:0:1:29 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:54:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:13:13:27:96.3%:99:1.4382E-14:39:1:1:0:27 1/1:38:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:43:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:48:22:11:11:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:45:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 852682 . T G . PASS AC=16;AF=0.053;AN=300;ANN=G|missense_variant|MODERATE|phoR_Rv0758|gene780|transcript|Transcript_gene780|Coding|1/1|c.287T>G|p.Leu96Arg|287/1458|287/1458|96/485||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.852682T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.852682T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 0/0:28:1:0:1:25:4%:38:5E-1:49:24:9:15:25 0/0:0:0:0:0:57:0%:99:1E0:46:57:30:27:58 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:34 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:13:0%:25:1E0:44:13:7:6:14 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:38:0%:70:1E0:49:38:19:19:39 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:27:10:38 0/0:0:0:0:0:9:0%:18:1E0:49:9:4:5:10 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:47 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:21 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:18 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:55:0%:99:1E0:42:55:34:21:57 0/0:0:0:0:0:21:0%:40:1E0:46:21:14:7:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:21:0%:40:1E0:50:21:11:10:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:22 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:17:9:26 0/0:0:0:0:0:37:0%:70:1E0:48:37:23:14:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:21:8:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:65:0%:99:1E0:47:65:33:32:66 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:47 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:21:9:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:34 0/0:0:0:0:0:32:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:50:0%:92:1E0:44:50:28:22:50 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:44 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:43 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:47:0%:89:1E0:42:47:33:14:48 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:24 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:40 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:44 0/0:0:0:0:0:40:0%:74:1E0:43:40:26:14:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:38 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:47 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:19 0/0:0:0:0:0:33:0%:63:1E0:44:33:23:10:33 0/0:0:0:0:0:53:0%:99:1E0:43:53:31:22:58 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:38:0%:70:1E0:42:38:26:12:38 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:50:21:13:8:23 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:35 0/0:0:0:0:0:22:0%:40:1E0:51:22:14:8:23 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:26 0/0:0:0:0:0:41:0%:78:1E0:43:41:32:9:43 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:31 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:20 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:34 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:23 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:23 0/0:0:0:0:0:23:0%:44:1E0:45:23:16:7:24 0/0:0:0:0:0:26:0%:47:1E0:45:26:19:7:26 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:50:36:21:15:36 0/0:0:0:0:0:60:0%:99:1E0:41:60:36:24:61 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:43 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:23:7:31 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:18:0%:32:1E0:45:18:5:13:19 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:19:7:27 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:23:0%:44:1E0:45:23:17:6:27 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:47 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:39:0%:74:1E0:41:39:31:8:41 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:30 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:59:0%:99:1E0:42:59:32:27:63 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:35 0/0:0:0:0:0:54:0%:99:1E0:41:54:38:16:58 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:54:0%:99:1E0:41:54:29:25:56 0/0:0:0:0:0:43:0%:82:1E0:38:43:22:21:44 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:35 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:34:0%:62:1E0:40:34:23:11:34 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:51 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:36 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:43 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:28 0/0:0:0:0:0:55:0%:99:1E0:38:55:31:24:57 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:38 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:28 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:48 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:41 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:39 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:45 0/0:0:0:0:0:47:0%:89:1E0:45:47:23:24:47 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:23:0%:44:1E0:44:23:16:7:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:58:0%:99:1E0:42:58:37:21:58 0/0:0:0:0:0:60:0%:99:1E0:41:60:30:30:63 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:48 MTB_anc 854252 . GC G . PASS AC=277;AF=0.923;AN=300;ANN=G|intergenic_region|MODIFIER|Rv0759c_Rv0759c-Rv0760c_Rv0760c|gene781-gene782|intergenic_region|gene781-gene782|||n.854253delC||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:43:15:28:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:13:5:8:14:92.86%:64:3.7391E-7:60:1:1:0:14 1/1:45:45:20:25:49:91.84%:99:1.1493E-23:41:4:0:4:49 1/1:43:26:12:14:27:96.3%:99:1.4382E-14:31:1:1:0:27 0/1:45:31:19:12:35:88.57%:99:2.7308E-16:42:3:2:1:35 0/1:36:19:6:13:21:86.36%:89:1.0931E-9:42:3:1:2:22 1/1:50:36:18:18:39:92.31%:99:4.2179E-19:34:3:2:1:39 1/1:43:25:14:11:25:96.15%:99:5.4444E-14:38:1:1:0:26 1/1:48:32:19:13:35:91.43%:99:7.5196E-17:51:3:2:1:35 1/1:46:41:20:21:42:93.18%:99:6.1775E-22:51:3:2:1:44 1/1:44:37:22:15:38:92.5%:99:3.0128E-20:54:2:1:1:39 1/1:46:43:22:21:44:97.73%:99:1.7144E-24:31:1:1:0:44 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:33:23:10:36:91.67%:99:2.0653E-17:40:3:2:1:36 1/1:44:21:12:9:22:95.45%:99:1.0931E-11:33:1:1:0:22 1/1:42:31:10:21:32:93.94%:99:8.2416E-17:47:2:1:1:33 1/1:45:18:8:10:18:94.74%:92:5.6585E-10:35:1:0:1:19 1/1:40:19:9:10:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:45:30:15:15:32:93.75%:99:3.0612E-16:33:2:1:1:32 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:9:11:20:95.24%:99:4.0873E-11:38:1:1:0:21 1/1:42:47:20:27:47:97.92%:99:7.6145E-27:33:1:1:0:48 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:15:16:33:93.94%:99:1.8007E-17:35:1:0:1:33 1/1:41:24:10:14:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:15:9:24:96%:99:2.0568E-13:60:1:0:1:25 0/1:54:14:7:7:17:82.35%:63:4.8851E-7:42:3:2:1:17 0/1:41:16:8:8:19:84.21%:73:4.357E-8:35:3:1:2:19 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:14:9:24:95.83%:99:7.7525E-13:60:1:1:0:24 1/1:43:18:9:9:20:90%:87:1.6758E-9:33:2:1:1:20 1/1:48:33:17:16:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:43:27:11:16:30:90%:99:4.6134E-14:51:3:1:2:30 1/1:49:29:14:15:32:90.62%:99:3.5714E-15:34:3:0:3:32 1/1:42:34:17:17:34:97.14%:99:3.2089E-19:66:1:1:0:35 1/1:42:34:24:10:33:100%:99:3.5146E-20:0:0:0:0:34 0/1:46:59:33:26:65:89.39%:99:4.3174E-30:42:7:3:4:67 1/1:45:48:25:23:50:96%:99:1.9625E-27:35:1:0:1:50 1/1:46:40:23:17:39:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:41:20:10:10:20:90.91%:98:1.3117E-10:35:2:1:1:22 1/1:42:29:13:16:31:93.55%:99:1.1344E-15:32:2:0:2:31 0/1:45:19:8:11:22:86.36%:89:1.0931E-9:32:3:3:0:23 0/1:42:17:8:9:20:85%:78:1.2848E-8:34:3:2:1:20 0/1:42:24:14:10:25:88.89%:99:2.0853E-12:34:3:2:1:27 1/1:44:18:7:11:20:90%:87:1.6758E-9:46:2:2:0:20 1/1:46:24:11:13:25:96%:99:2.0568E-13:30:1:0:1:25 1/1:46:39:13:26:40:97.5%:99:3.8137E-22:33:1:1:0:40 1/1:40:25:16:9:26:96.15%:99:5.4444E-14:35:1:0:1:26 1/1:45:34:16:18:37:91.89%:99:5.6582E-18:51:3:0:3:37 0/1:48:17:9:8:20:85%:78:1.2848E-8:42:3:2:1:20 1/1:39:29:12:17:31:93.55%:99:1.1344E-15:34:2:1:1:31 1/1:48:30:19:11:30:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:44:42:25:17:43:97.67%:99:6.6289E-24:34:1:0:1:43 0/1:44:24:14:10:27:88.89%:99:2.0853E-12:32:3:3:0:27 1/1:42:40:21:19:43:93.02%:99:2.287E-21:33:3:1:2:43 0/1:41:26:11:15:29:89.66%:99:1.6496E-13:32:3:3:0:29 1/1:44:25:12:13:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:43:21:11:10:22:95.45%:99:1.0931E-11:34:1:0:1:22 0/1:50:42:23:19:47:89.36%:99:1.5987E-21:45:5:2:3:47 1/1:39:25:11:14:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:44:36:18:18:37:97.3%:99:2.1762E-20:34:1:1:0:37 1/1:42:33:16:17:34:94.29%:99:5.9366E-18:31:2:1:1:35 1/1:53:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:27:14:13:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:47:54:31:23:53:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:26:11:15:27:96.3%:99:1.4382E-14:33:1:1:0:27 1/1:43:34:12:22:37:91.89%:99:5.6582E-18:30:3:2:1:37 1/1:46:15:7:8:16:93.75%:75:2.8282E-8:60:1:0:1:16 1/1:47:30:20:10:32:90.91%:99:9.89E-16:41:3:1:2:33 0/1:44:28:20:8:32:87.5%:99:3.2142E-14:33:4:2:2:32 1/1:49:22:8:14:23:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:45:20:9:11:21:90.91%:98:1.3117E-10:34:2:1:1:22 1/1:46:38:19:19:38:97.44%:99:1.4697E-21:60:1:0:1:39 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:16:14:31:96.77%:99:6.8754E-17:34:1:0:1:31 0/1:43:23:16:7:26:85.19%:99:1.6161E-11:32:4:0:4:28 1/1:50:31:16:15:33:93.94%:99:8.2416E-17:46:2:2:0:33 0/1:43:23:11:12:26:88.46%:99:7.3681E-12:60:3:1:2:26 1/1:42:26:10:16:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:16:20:38:94.74%:99:1.1316E-19:33:2:1:1:38 1/1:47:22:15:7:24:91.67%:99:1.0078E-11:32:2:1:1:24 1/1:47:31:21:10:33:91.18%:99:2.7308E-16:34:3:2:1:34 1/1:42:28:16:12:30:90.32%:99:1.2857E-14:35:3:3:0:31 0/1:44:26:13:13:29:89.66%:99:1.6496E-13:41:3:1:2:29 1/1:48:32:13:19:34:94.12%:99:2.2142E-17:32:2:1:1:34 1/1:47:28:18:10:29:96.55%:99:9.9776E-16:30:1:0:1:30 1/1:46:44:19:25:45:95.65%:99:4.4304E-25:33:1:1:0:46 1/1:47:35:15:20:36:94.59%:99:4.2437E-19:33:2:0:2:37 1/1:48:45:23:22:48:93.75%:99:3.2362E-24:51:3:0:3:48 1/1:50:23:14:9:24:95.83%:99:7.7525E-13:28:1:1:0:24 1/1:42:52:24:28:53:96.3%:99:6.1952E-29:34:2:0:2:54 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:42:20:22:44:93.33%:99:1.6658E-22:36:3:1:2:45 1/1:41:29:13:16:30:93.55%:99:1.1344E-15:31:2:1:1:31 0/1:37:32:15:17:33:88.89%:99:2.0653E-16:46:4:3:1:36 1/1:44:28:14:14:30:90.32%:99:1.2857E-14:43:3:1:2:31 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/1:42:30:18:12:34:88.24%:99:2.5943E-15:39:4:3:1:34 1/1:43:25:9:16:27:92.59%:99:2.0853E-13:52:2:1:1:28 1/1:43:30:15:15:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:46:33:13:43:97.87%:99:2.9526E-26:33:1:1:0:48 1/1:39:22:8:14:22:91.67%:99:1.0078E-11:32:2:2:0:24 1/1:42:19:9:10:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:17:17:35:94.44%:99:1.5887E-18:48:2:2:0:36 1/1:43:40:21:19:41:95.24%:99:5.6346E-22:60:2:1:1:42 1/1:40:24:10:14:26:92.31%:99:7.6222E-13:36:2:0:2:26 1/1:42:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:29:16:13:32:90.62%:99:1.1344E-15:34:2:0:2:32 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:37:19:18:38:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:39:33:15:18:33:97.06%:99:1.2301E-18:38:1:1:0:34 1/1:38:41:19:22:44:91.11%:99:2.0407E-21:30:4:2:2:47 1/1:38:29:17:12:28:96.67%:99:2.6212E-16:26:1:1:0:31 1/1:43:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:34:21:7:14:21:91.3%:99:3.6437E-11:35:2:1:1:23 1/1:40:49:20:29:51:94.23%:99:1.6572E-26:42:3:1:2:52 1/1:40:59:35:24:62:93.65%:99:2.8722E-32:35:3:1:2:63 0/0:37:1:0:1:21:4.76%:31:5E-1:41:20:10:10:22 1/1:39:22:12:10:23:91.67%:99:1.0078E-11:33:2:1:1:24 1/1:40:50:30:20:51:96.15%:99:9.0394E-28:30:2:1:1:52 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:43:24:19:45:91.49%:99:1.5372E-22:33:4:3:1:47 1/1:34:42:25:17:43:95.45%:99:3.9431E-23:47:2:1:1:44 1/1:39:46:20:26:50:90.2%:99:9.5589E-24:38:5:2:3:52 1/1:38:33:20:13:34:91.67%:99:2.0653E-17:41:3:2:1:36 1/1:38:37:24:13:35:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:38:30:13:17:32:90.91%:99:9.89E-16:34:3:3:0:33 1/1:39:48:22:26:51:92.31%:99:2.3201E-25:34:4:0:4:52 0/1:37:38:22:16:41:88.37%:99:2.5797E-19:33:5:3:2:43 1/1:39:44:23:21:42:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:30:8:22:32:93.75%:99:3.0612E-16:34:2:1:1:32 1/1:41:21:13:8:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:43:24:19:45:95.56%:99:1.0412E-23:30:2:0:2:45 1/1:47:41:18:23:44:91.11%:99:2.0407E-21:33:4:3:1:45 1/1:43:36:17:19:37:94.74%:99:2.1762E-20:37:1:0:1:37 1/1:38:35:14:21:35:97.22%:99:8.3613E-20:33:1:0:1:36 1/1:39:29:14:15:31:93.55%:99:2.6212E-16:32:1:0:1:32 1/1:37:27:12:15:28:90%:99:4.6134E-14:32:3:2:1:30 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:22:17:41:95.12%:99:2.1258E-21:33:2:1:1:41 1/1:39:44:20:24:42:100%:99:3.8097E-26:0:0:0:0:44 0/1:45:26:14:12:28:89.66%:99:1.6496E-13:30:3:1:2:30 0/1:41:31:13:18:36:86.11%:99:1.6935E-15:34:5:4:1:37 1/1:41:44:24:20:47:91.67%:99:2.7459E-24:33:2:0:2:48 1/1:41:55:29:26:51:98.21%:99:1.4593E-31:60:1:0:1:56 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 855055 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|adhB_Rv0761c|gene783|transcript|Transcript_gene783|Coding|1/1|c.772G>A|p.Val258Met|772/1128|772/1128|258/375||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.855055C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.855055C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:44:46:29:17:46 0/0:0:0:0:0:19:0%:37:1E0:49:19:12:7:19 0/0:0:0:0:0:55:0%:99:1E0:46:55:23:32:55 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:33:1:0:1:34:2.94%:51:5E-1:53:33:12:21:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:39 0/0:0:0:0:0:41:0%:78:1E0:49:41:21:20:41 0/0:0:0:0:0:38:0%:70:1E0:46:38:12:26:38 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:44 0/0:0:0:0:0:17:0%:33:1E0:41:17:9:8:17 0/0:0:0:0:0:58:0%:99:1E0:44:58:36:22:58 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:25:13:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:23:0%:44:1E0:49:23:9:14:23 0/0:0:0:0:0:50:0%:92:1E0:46:50:27:23:50 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:41 0/0:0:0:0:0:53:0%:99:1E0:46:53:31:22:54 0/0:0:0:0:0:39:0%:74:1E0:47:39:19:20:40 0/0:0:0:0:0:36:0%:66:1E0:50:36:15:21:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:25:0%:48:1E0:51:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:24 0/0:0:0:0:0:34:0%:62:1E0:51:34:20:14:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:56:0%:99:1E0:46:56:28:28:57 0/0:0:0:0:0:43:0%:82:1E0:48:43:21:22:43 0/0:0:0:0:0:46:0%:85:1E0:46:46:27:19:47 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:45 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:17:0%:33:1E0:48:17:7:10:17 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:47:0%:89:1E0:41:47:28:19:47 0/0:0:0:0:0:49:0%:93:1E0:43:49:23:26:51 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:22 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:51 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:22 0/0:0:0:0:0:49:0%:93:1E0:46:49:31:18:49 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:44:0%:81:1E0:48:44:25:19:44 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:40:0%:74:1E0:45:40:15:25:40 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:8:20:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:57:0%:99:1E0:46:57:28:29:58 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:33 0/0:0:0:0:0:45:0%:85:1E0:44:45:30:15:45 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:23:7:32 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:17:0%:33:1E0:51:17:7:10:17 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:42 0/0:0:0:0:0:43:0%:82:1E0:42:43:29:14:43 0/0:0:0:0:0:30:0%:55:1E0:47:30:10:20:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:34 0/0:0:0:0:0:33:0%:63:1E0:51:33:14:19:33 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/1:47:13:10:3:16:81.25%:57:1.6121E-6:52:3:1:2:16 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:32:0%:59:1E0:45:32:10:22:32 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:20 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:46 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:57:0%:99:1E0:43:57:23:34:57 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:44 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:39 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:33 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:15:25:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:14:24:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:45 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:35 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:48 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:76:0%:99:1E0:43:76:42:34:76 0/0:0:0:0:0:49:0%:93:1E0:44:49:22:27:49 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 0/0:0:0:0:0:54:0%:99:1E0:41:54:42:12:58 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:41 0/0:0:0:0:0:58:0%:99:1E0:42:58:28:30:59 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:44 0/0:0:0:0:0:49:0%:93:1E0:41:49:20:29:50 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:43 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:52 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:55:0%:99:1E0:43:55:33:22:55 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:61:0%:99:1E0:40:61:28:33:62 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:46 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:22 0/0:0:0:0:0:31:0%:59:1E0:42:31:9:22:32 0/0:0:0:0:0:56:0%:99:1E0:45:56:32:24:56 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 MTB_anc 871271 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|purB_Rv0777|gene799|transcript|Transcript_gene799|Coding|1/1|c.1264C>A|p.Pro422Thr|1264/1419|1264/1419|422/472||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.871271C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.871271C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:23:7:16:24:95.83%:99:1.2146E-13:0:0:0:0:26 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:42:10:32:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:40:21:19:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:39:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:35:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:38:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:48:18:30:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 874835 . C CCG . PASS AC=298;AF=0.993;AN=300;ANN=CCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.874835_874836insCG||||||,CCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.874835_874836insCG||||||,CCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.874835_874836insCG||||||,CCG|intergenic_region|MODIFIER|purC_Rv0780-emrB_Rv0783c|gene802-gene803|intergenic_region|gene802-gene803|||n.874835_874836insCG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:35:19:16:36:97.22%:99:8.3613E-20:36:1:1:0:36 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:27:14:13:27:96.43%:99:3.7915E-15:32:1:0:1:28 1/1:43:23:14:9:25:92%:99:2.7767E-12:34:2:0:2:25 1/1:45:26:12:14:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:26:12:14:27:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:46:24:12:12:23:100%:99:3.101E-14:0:0:0:0:24 1/1:51:40:23:17:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:47:24:11:13:25:96%:99:2.0568E-13:35:1:1:0:25 1/1:47:32:23:9:34:94.12%:99:4.7095E-18:60:1:1:0:34 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:12:12:26:92.31%:99:7.6222E-13:60:2:1:1:26 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:32:18:14:32:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:42:73:41:32:73:97.33%:99:3.1521E-41:34:2:0:2:75 1/1:50:27:17:10:27:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:43:31:14:17:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:22:9:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:51:24:10:14:26:92.31%:99:7.6222E-13:47:2:1:1:26 1/1:49:23:16:7:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:47:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:26:16:10:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:16:15:32:96.88%:99:1.8007E-17:37:1:1:0:32 1/1:42:20:11:9:22:90.91%:98:1.3117E-10:36:2:2:0:22 1/1:48:28:16:12:29:96.55%:99:9.9776E-16:35:1:0:1:29 1/1:41:26:15:11:26:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:18:13:34:91.18%:99:8.2416E-17:33:2:1:1:34 1/1:43:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:65:35:30:64:100%:99:1.0519E-38:0:0:0:0:65 1/1:47:38:17:21:40:95%:99:8.0088E-21:48:2:1:1:40 1/1:46:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:35:17:18:37:94.59%:99:4.2437E-19:34:2:1:1:37 1/1:42:19:10:9:17:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:33:18:15:33:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:24:12:37:94.74%:99:2.1762E-20:35:1:0:1:37 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 0/1:40:6:3:3:8:75%:24:3.4965E-3:47:2:1:1:8 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 0/1:49:17:9:8:19:89.47%:82:5.9414E-9:60:2:1:1:19 1/1:46:24:9:15:26:92.31%:99:7.6222E-13:30:2:1:1:26 1/1:44:20:11:9:21:95.24%:99:4.0873E-11:60:1:0:1:21 1/1:45:37:18:19:39:94.87%:99:3.0128E-20:34:2:1:1:39 1/1:44:25:12:13:25:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:50:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:38:17:21:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:39:21:18:41:95.12%:99:2.1258E-21:47:2:0:2:41 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:37:17:20:37:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:45:44:22:22:45:95.65%:99:2.7459E-24:34:2:0:2:46 1/1:44:30:15:15:29:96.77%:99:6.8754E-17:34:1:1:0:31 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:49:27:22:50:98%:99:3.925E-29:0:0:0:0:50 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:13:13:28:92.86%:99:5.6872E-14:33:2:1:1:28 1/1:48:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:24:14:10:25:96%:99:3.101E-14:0:0:0:0:25 1/1:43:21:9:12:23:91.3%:99:3.6437E-11:31:2:2:0:23 1/1:51:22:11:11:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:34:16:18:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:14:15:30:93.55%:99:2.6212E-16:37:1:1:0:31 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:17:11:6:17:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:43:22:9:13:22:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:35:24:11:36:94.59%:99:4.2437E-19:48:2:1:1:37 1/1:44:28:13:15:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:32:15:17:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:31:15:16:33:93.94%:99:1.8007E-17:31:1:0:1:33 1/1:46:28:17:11:29:96.55%:99:9.9776E-16:35:1:0:1:29 1/1:51:36:17:19:38:94.74%:99:1.1316E-19:36:2:0:2:38 1/1:46:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:51:22:29:52:98.08%:99:3.3479E-29:60:1:0:1:52 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:13:16:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:17:11:30:93.33%:99:4.194E-15:36:2:2:0:30 1/1:44:25:12:13:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:18:22:41:97.56%:99:9.8874E-23:34:1:1:0:41 1/1:43:39:21:18:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:13:13:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:15:17:32:96.97%:99:4.7095E-18:33:1:0:1:33 1/1:44:34:17:17:35:97.14%:99:3.2089E-19:34:1:1:0:35 1/1:43:33:19:14:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:18:17:37:94.59%:99:4.2437E-19:47:2:1:1:37 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:16:8:8:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:35:21:14:35:97.22%:99:8.3613E-20:30:1:0:1:36 1/1:41:46:20:26:45:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:44:25:19:45:97.78%:99:4.4304E-25:32:1:1:0:45 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:55:26:29:56:98.21%:99:1.4593E-31:33:1:1:0:56 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:14:14:28:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:41:46:24:22:47:97.87%:99:2.9526E-26:35:1:1:0:47 1/1:41:41:22:19:41:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:44:48:25:23:49:97.96%:99:1.9625E-27:33:1:1:0:49 1/1:38:47:24:23:48:97.92%:99:7.6145E-27:36:1:1:0:49 1/1:41:45:20:25:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:39:25:14:40:97.5%:99:3.8137E-22:36:1:1:0:40 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:53:29:24:50:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:36:20:16:35:97.3%:99:2.1762E-20:30:1:0:1:37 1/1:39:48:20:28:48:97.96%:99:1.554E-28:0:0:0:0:49 1/1:39:33:20:13:33:97.06%:99:1.2301E-18:33:1:1:0:34 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:48:26:22:48:96%:99:1.3143E-26:47:2:1:1:50 1/1:42:46:20:26:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:36:12:24:37:97.3%:99:2.1762E-20:37:1:1:0:37 1/1:42:38:18:20:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:16:18:35:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:43:31:17:14:32:96.88%:99:1.8007E-17:35:1:1:0:32 1/1:38:41:18:23:41:97.62%:99:2.5612E-23:34:1:1:0:42 1/1:39:28:14:14:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:47:28:19:49:95.92%:99:5.0044E-26:32:2:0:2:49 1/1:43:51:26:25:51:96.23%:99:2.3675E-28:47:2:0:2:53 1/1:43:41:25:16:38:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 878992 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv0784_Rv0784|gene804|transcript|Transcript_gene804|Coding|1/1|c.355G>A|p.Val119Ile|355/687|355/687|119/228||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.878992G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.878992G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:16:31:47 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 0/0:0:0:0:0:47:0%:89:1E0:43:47:19:28:47 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:17:0%:33:1E0:43:17:3:14:19 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:42 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:53 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:41 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:20 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:9:20:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:41 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:60:1:0:1:29:3.45%:45:5E-1:49:28:14:14:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:39 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:58:0%:99:1E0:45:58:34:24:59 0/0:0:0:0:0:44:0%:81:1E0:45:44:27:17:44 0/0:0:0:0:0:48:0%:89:1E0:46:48:18:30:49 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:51 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:40 0/0:0:0:0:0:15:0%:29:1E0:46:15:6:9:15 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:44 0/0:0:0:0:0:26:0%:47:1E0:47:26:18:8:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:6:21:28 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:47 0/0:38:1:1:0:38:2.63%:58:5E-1:42:37:19:18:38 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:43 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:45 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:63:0%:99:1E0:46:63:34:29:63 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:45:0%:85:1E0:45:45:17:28:45 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:23:0%:44:1E0:49:23:8:15:23 0/0:0:0:0:0:14:0%:25:1E0:46:14:6:8:14 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:50 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:51:0%:97:1E0:44:51:28:23:51 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:22:0%:40:1E0:51:22:11:11:22 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:14:0%:25:1E0:47:14:7:7:14 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:21:0%:40:1E0:49:21:6:15:21 0/0:0:0:0:0:57:0%:99:1E0:41:57:30:27:57 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:27 0/0:0:0:0:0:48:0%:89:1E0:41:48:20:28:49 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:36:0%:66:1E0:39:36:22:14:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:21:8:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:32 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:45 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:50 0/0:0:0:0:0:50:0%:92:1E0:41:50:24:26:51 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:40 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:43 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:42 0/0:0:0:0:0:45:0%:85:1E0:39:45:28:17:46 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:43 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:44 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:48:0%:89:1E0:39:48:24:24:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:25:10:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:37:0%:70:1E0:38:37:12:25:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:47:0%:89:1E0:41:47:17:30:48 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:49 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:50 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:43 MTB_anc 885223 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv0791c_Rv0791c|gene812|transcript|Transcript_gene812|Coding|1/1|c.618A>G|p.Pro206Pro|618/1044|618/1044|206/347||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.885223T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.885223T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:68:30:38:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:71:34:37:71:100%:99:2.6835E-42:0:0:0:0:72 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:66:25:41:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:53:19:34:54:98.15%:99:1.5943E-31:0:0:0:0:55 1/1:42:65:21:44:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:55:18:37:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:41:16:25:43:95.35%:99:1.4915E-22:46:2:1:1:45 1/1:47:50:24:26:51:98.04%:99:1.3013E-28:60:1:0:1:51 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:68:33:35:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:72:31:41:72:100%:99:6.7558E-43:0:0:0:0:73 1/1:46:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:62:23:39:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:65:29:36:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:43:63:25:38:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:58:21:37:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:40:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:39:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:36:24:9:15:25:96%:99:2.0568E-13:38:1:0:1:26 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:27:14:13:28:96.43%:99:3.7915E-15:37:1:0:1:28 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:60:35:25:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 889018 . AG A . PASS AC=155;AF=0.517;AN=300;ANN=A|intergenic_region|MODIFIER|lpdB_Rv0794c-Rv0797_Rv0797|gene815-gene816|intergenic_region|gene815-gene816|||n.889019delG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:35:21:14:43:79.55%:99:1.6883E-16:42:9:5:4:44 0/1:44:12:7:5:19:63.16%:47:1.8611E-5:50:7:4:3:20 0/1:44:53:23:30:65:79.1%:99:1.2169E-24:48:14:7:7:67 0/1:41:25:15:10:35:71.43%:99:2.8437E-11:51:10:7:3:36 0/1:45:28:9:19:37:75.68%:99:6.3095E-13:51:9:4:5:37 0/1:47:21:12:9:34:61.76%:83:4.9442E-9:50:13:6:7:34 0/1:44:42:16:26:54:77.78%:99:1.9804E-19:55:12:6:6:54 0/1:41:29:17:12:41:67.44%:99:1.1593E-12:43:14:9:5:43 0/1:43:34:19:15:40:79.07%:99:5.5428E-16:52:9:7:2:43 0/1:47:33:19:14:43:76.74%:99:2.9377E-15:44:10:6:4:43 0/1:46:25:10:15:34:73.53%:99:1.9819E-11:53:9:3:6:34 0/1:39:41:19:22:62:64.06%:99:2.6828E-17:43:23:12:11:64 0/1:47:22:12:10:31:70.97%:92:5.875E-10:51:9:5:4:31 0/1:41:41:18:23:52:71.93%:99:3.4041E-18:43:16:8:8:57 0/1:41:24:16:8:32:70.59%:99:8.7205E-11:44:10:5:5:34 0/1:44:35:16:19:41:85.37%:99:2.5278E-17:40:6:4:2:42 1/1:47:29:17:12:29:90.62%:99:3.5714E-15:53:3:1:2:33 0/1:42:12:8:4:19:63.16%:47:1.8611E-5:44:7:4:3:19 0/1:40:21:7:14:32:63.64%:83:3.9837E-9:48:12:4:8:33 0/1:42:20:9:11:25:74.07%:85:2.7631E-9:46:7:3:4:28 0/1:41:20:8:12:29:66.67%:81:7.1675E-9:46:10:6:4:30 0/1:35:36:21:15:46:73.47%:99:3.261E-16:47:13:7:6:49 0/1:48:28:16:12:36:75.68%:99:6.3095E-13:45:9:5:4:37 0/1:42:43:23:20:54:79.63%:99:3.6008E-20:48:11:4:7:54 0/1:43:36:15:21:45:80%:99:5.1219E-17:42:9:3:6:45 0/1:46:23:11:12:32:69.7%:95:2.6558E-10:51:10:6:4:33 0/1:43:21:12:9:29:70%:87:1.7919E-9:46:9:4:5:30 0/1:51:18:6:12:25:72%:75:2.6626E-8:50:7:5:2:25 0/1:44:25:13:12:33:75.76%:99:1.3235E-11:51:8:4:4:33 0/1:43:33:15:18:41:78.57%:99:1.8121E-15:47:9:5:4:42 0/1:49:18:5:13:31:58.06%:69:1.1154E-7:41:13:6:7:31 1/1:47:26:18:8:28:92.86%:99:5.6872E-14:44:2:1:1:28 1/1:45:34:16:18:37:91.89%:99:5.6582E-18:52:3:2:1:37 0/1:39:18:11:7:33:52.94%:67:1.7305E-7:43:16:9:7:34 0/1:49:28:16:12:34:82.35%:99:1.349E-13:41:6:2:4:34 0/1:45:30:16:14:39:76.92%:99:6.162E-14:50:9:7:2:39 0/1:45:31:18:13:36:83.78%:99:3.4914E-15:53:6:3:3:37 0/1:45:49:28:21:62:76.56%:99:2.2511E-22:48:15:10:5:64 0/1:45:39:17:22:50:76.47%:99:6.6776E-18:40:12:5:7:51 0/1:44:33:12:21:38:84.62%:99:2.9926E-16:44:6:4:2:39 0/1:44:24:10:14:34:70.59%:99:8.7205E-11:41:10:6:4:34 0/1:41:38:15:23:45:79.17%:99:8.1086E-18:44:10:5:5:49 0/1:46:28:14:14:36:75.68%:99:6.3095E-13:44:9:6:3:37 0/1:45:31:15:16:39:79.49%:99:1.1554E-14:42:8:7:1:39 0/1:42:30:13:17:36:78.95%:99:3.7857E-14:43:8:3:5:38 0/1:43:29:16:13:40:72.5%:99:4.43E-13:49:11:3:8:40 0/1:45:32:17:15:38:84.21%:99:1.0241E-15:47:6:0:6:38 0/1:43:41:24:17:55:74.55%:99:1.5691E-18:42:14:11:3:55 0/1:38:29:16:13:33:82.86%:99:4.008E-14:45:6:1:5:35 0/1:44:37:21:16:42:78.72%:99:2.6563E-17:39:10:2:8:47 0/1:49:12:5:7:21:57.14%:45:2.658E-5:46:9:4:5:21 0/1:42:29:16:13:35:82.86%:99:4.008E-14:45:6:0:6:36 0/1:43:25:11:14:29:83.33%:99:2.745E-12:47:5:3:2:30 0/1:45:32:16:16:36:88.89%:99:2.0653E-16:43:4:2:2:36 0/1:38:21:11:10:26:77.78%:92:5.6888E-10:44:6:5:1:27 0/1:40:41:19:22:45:85.42%:99:3.1535E-20:47:7:5:2:50 0/1:42:34:18:16:45:75.56%:99:9.117E-16:40:10:7:3:46 0/1:40:28:15:13:34:77.78%:99:4.0051E-13:45:8:3:5:36 0/1:42:37:19:18:43:84.09%:99:4.4107E-18:47:7:4:3:44 0/1:46:30:16:14:41:71.43%:99:2.043E-13:52:12:6:6:43 0/1:42:33:15:18:39:82.5%:99:5.85E-16:45:7:4:3:40 0/1:42:33:20:13:40:80.49%:99:1.0617E-15:44:8:5:3:41 0/1:42:22:11:11:35:62.86%:87:1.7197E-9:38:13:7:6:35 0/1:48:22:10:12:31:70.97%:92:5.875E-10:42:9:4:5:31 0/1:47:30:14:16:54:55.56%:99:3.1807E-12:46:24:9:15:54 0/1:46:53:26:27:72:73.61%:99:1.2262E-23:43:19:13:6:72 1/1:39:20:13:7:21:90.91%:98:1.3117E-10:48:2:2:0:22 0/1:41:26:8:18:30:81.25%:99:1.5064E-12:47:6:2:4:33 0/1:46:22:7:15:29:75.86%:95:2.7763E-10:50:7:4:3:29 0/1:48:28:14:14:31:84.85%:99:6.9527E-14:50:5:4:1:33 0/1:48:25:11:14:38:64.1%:99:8.8326E-11:44:14:10:4:39 0/1:48:34:13:21:43:75.56%:99:1.4341E-15:49:11:6:5:45 0/1:52:19:9:10:27:70.37%:79:1.2089E-8:49:8:4:4:27 0/1:49:30:15:15:49:61.22%:99:1.3155E-12:50:19:11:8:49 0/1:40:39:21:18:52:75%:99:1.0373E-17:39:13:7:6:52 0/1:40:25:15:10:31:75.76%:99:1.3235E-11:42:8:4:4:33 0/1:42:23:12:11:32:67.65%:94:3.5675E-10:48:11:6:5:34 0/1:47:29:12:17:34:80.56%:99:7.2821E-14:39:7:6:1:36 0/1:42:33:19:14:42:78.57%:99:1.8121E-15:44:9:3:6:43 0/1:38:25:11:14:30:83.33%:99:1.3609E-12:43:4:2:2:30 0/1:40:22:9:13:29:70.97%:92:5.875E-10:48:9:5:4:31 0/1:40:48:30:18:62:75%:99:1.1256E-21:39:16:8:8:64 0/1:44:30:11:19:39:75%:99:9.555E-14:44:10:5:5:41 0/1:47:19:9:10:26:73.08%:80:8.6144E-9:41:7:2:5:26 0/1:43:24:14:10:33:70.59%:99:8.7205E-11:43:10:8:2:36 0/1:42:31:19:12:37:83.78%:99:3.4914E-15:36:6:3:3:37 0/1:38:26:16:10:40:60.47%:99:5.8338E-11:42:17:7:10:44 0/1:43:16:6:10:18:80%:71:7.7086E-8:48:4:3:1:20 0/1:45:40:18:22:48:83.33%:99:2.2074E-19:51:8:8:0:48 0/1:45:22:11:11:35:62.86%:87:1.7197E-9:43:13:7:6:35 0/1:44:32:18:14:45:69.57%:99:4.2225E-14:47:14:10:4:46 0/1:51:23:12:11:35:63.89%:92:5.9342E-10:53:13:8:5:37 0/1:43:32:16:16:40:80%:99:3.51E-15:43:8:3:5:41 0/1:42:25:8:17:32:73.53%:99:1.9819E-11:42:9:5:4:35 0/1:42:41:20:21:49:82%:99:1.2455E-19:43:9:3:6:50 0/1:42:25:13:12:28:83.33%:99:2.745E-12:41:5:3:2:31 0/1:38:29:16:13:41:69.05%:99:8.6436E-13:41:13:8:5:43 0/1:44:28:18:10:36:77.78%:99:4.0051E-13:39:8:6:2:36 0/1:38:31:11:20:37:75.61%:99:3.008E-14:36:10:8:2:42 0/1:40:30:15:15:39:76.92%:99:3.7857E-14:39:8:4:4:39 0/1:46:24:12:12:30:77.42%:99:2.7115E-11:46:7:4:3:32 0/1:45:33:15:18:40:82.5%:99:5.85E-16:41:7:5:2:41 0/1:36:17:7:10:31:51.52%:63:4.6376E-7:37:16:6:10:34 0/1:36:29:18:11:39:67.44%:99:1.1593E-12:41:14:7:7:44 0/1:38:20:9:11:35:55.56%:76:2.3419E-8:43:16:10:6:36 0/1:49:16:9:7:21:72.73%:67:1.7905E-7:49:6:4:2:22 0/1:40:23:12:11:31:71.88%:97:1.9117E-10:45:9:3:6:32 0/1:43:37:20:17:48:75.51%:99:6.8376E-17:40:12:6:6:49 0/1:42:27:21:6:40:67.5%:99:7.8264E-12:47:13:9:4:40 0/1:40:23:8:15:30:74.19%:98:1.3219E-10:41:8:4:4:31 0/1:45:33:13:20:47:70.21%:99:1.3848E-14:43:14:4:10:47 0/1:38:22:13:9:25:78.57%:97:1.7583E-10:44:6:4:2:28 0/1:36:25:14:11:33:71.43%:99:2.8437E-11:34:10:5:5:37 0/1:43:24:11:13:29:80%:99:1.647E-11:43:6:4:2:30 0/1:38:37:16:21:54:67.27%:99:5.5814E-16:41:18:11:7:57 0/1:39:38:20:18:50:74.51%:99:3.2874E-17:42:13:9:4:51 0/1:35:35:15:20:38:85.37%:99:2.5278E-17:37:6:3:3:41 0/1:39:32:17:15:40:76.19%:99:9.4228E-15:49:10:7:3:42 0/1:38:15:9:6:17:83.33%:68:1.4655E-7:45:3:3:0:20 0/1:41:54:26:28:68:78.26%:99:6.2694E-25:38:15:7:8:70 0/1:39:48:22:26:57:81.36%:99:8.884E-23:40:11:8:3:59 0/1:42:23:12:11:27:85.19%:99:1.6161E-11:60:4:2:2:27 0/1:35:26:15:11:30:74.29%:99:6.3192E-12:42:9:3:6:36 0/1:37:40:19:21:47:80%:99:7.4728E-19:37:10:7:3:52 0/1:39:29:13:16:37:72.5%:99:4.43E-13:39:11:5:6:41 0/1:39:32:21:11:48:65.31%:99:9.8751E-14:40:17:8:9:50 0/1:36:30:15:15:45:63.83%:99:8.4848E-13:39:17:9:8:48 0/1:34:33:12:21:42:70.21%:99:1.3848E-14:40:14:6:8:48 0/1:36:43:21:22:50:76.79%:99:9.8955E-20:38:13:9:4:56 0/1:36:30:15:15:41:69.77%:99:2.8473E-13:39:13:8:5:43 0/1:37:25:15:10:42:58.14%:97:1.977E-10:37:18:9:9:43 0/1:34:30:19:11:45:61.22%:99:1.3155E-12:40:19:4:15:49 0/1:36:30:17:13:38:71.43%:99:2.043E-13:39:12:5:7:44 0/1:35:30:16:14:37:73.17%:99:1.422E-13:39:11:7:4:43 0/1:35:38:19:19:48:73.08%:99:4.8901E-17:37:14:5:9:53 0/1:40:26:15:11:34:72.22%:99:9.2118E-12:39:10:4:6:36 0/1:37:52:28:24:68:71.23%:99:8.0968E-23:37:21:11:10:77 0/1:42:37:21:16:45:82.22%:99:8.5365E-18:42:8:4:4:45 0/1:36:34:17:17:37:82.93%:99:1.7333E-16:40:7:4:3:41 0/1:37:31:15:16:43:67.39%:99:1.7172E-13:39:15:11:4:47 0/1:42:33:20:13:49:64.71%:99:4.3121E-14:44:18:10:8:51 0/1:43:28:15:13:34:77.78%:99:4.0051E-13:40:8:5:3:36 0/1:43:33:15:18:42:78.57%:99:1.8121E-15:42:9:6:3:42 0/1:38:37:21:16:43:78.72%:99:2.6563E-17:46:10:4:6:47 0/1:39:28:15:13:36:73.68%:99:9.4894E-13:39:10:7:3:39 0/1:37:17:9:8:23:73.91%:72:5.7694E-8:45:6:1:5:23 0/1:44:27:12:15:39:69.23%:99:5.8329E-12:38:12:6:6:39 1/1:40:38:25:13:41:90.48%:99:9.7197E-20:49:4:2:2:42 0/1:40:45:25:20:61:71.43%:99:7.5677E-20:42:18:10:8:66 0/1:39:31:22:9:46:65.96%:99:2.2538E-13:38:16:7:9:47 MTB_anc 891011 . G A . PASS AC=64;AF=1.00;AN=64;ANN=A|synonymous_variant|LOW|Rv0797_Rv0797|gene816|transcript|Transcript_gene816|Coding|1/1|c.624G>A|p.Leu208Leu|624/1095|624/1095|208/364||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.891011G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.891011G>A||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 MTB_anc 891756 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|cfp29_Rv0798c|gene817|transcript|Transcript_gene817|Coding|1/1|c.514T>C|p.Leu172Leu|514/798|514/798|172/265||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.891756A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.891756A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:61:30:31:61:100%:99:2.609E-36:0:0:0:0:61 1/1:47:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:42:24:18:43:97.67%:99:6.6289E-24:59:1:0:1:43 1/1:50:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:63:33:30:63:100%:99:1.657E-37:0:0:0:0:63 1/1:47:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:49:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:61:34:27:61:100%:99:2.609E-36:0:0:0:0:63 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:49:35:21:14:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:61 1/1:41:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:56:24:32:57:98.25%:99:3.7452E-32:60:1:1:0:57 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 MTB_anc 894888 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv0801_Rv0801|gene820|transcript|Transcript_gene820|Coding|1/1|c.258C>T|p.Ser86Ser|258/348|258/348|86/115||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.894888C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.894888C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:51:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:72:43:29:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:51:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:34:19:15:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:14:16:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:16:10:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:61:27:34:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:58 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:69:29:40:70:98.57%:99:7.5676E-40:39:1:0:1:71 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 897209 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|purL_Rv0803|gene822|transcript|Transcript_gene822|Coding|1/1|c.1390G>C|p.Glu464Gln|1390/2265|1390/2265|464/754||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.897209G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.897209G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:49:16:33:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:54:27:27:55:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:18:12:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:63:39:24:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:49:30:19:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 902413 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|purF_Rv0808|gene827|transcript|Transcript_gene827|Coding|1/1|c.303C>T|p.Val101Val|303/1584|303/1584|101/527||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.902413C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.902413C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:58:38:20:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:38:33:5:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:33:26:7:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:32:26:6:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:38:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:29:25:4:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:38:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:48:29:19:48:100%:99:1.554E-28:0:0:0:0:51 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:38:32:6:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:46:33:13:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 907514 . A G . PASS AC=50;AF=0.167;AN=300;ANN=G|missense_variant|MODERATE|Rv0813c_Rv0813c|gene832|transcript|Transcript_gene832|Coding|1/1|c.505T>C|p.Trp169Arg|505/681|505/681|169/226||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.907514A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.907514A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:45:55:29:26:56 0/0:0:0:0:0:13:0%:25:1E0:52:13:3:10:14 0/0:0:0:0:0:44:0%:81:1E0:45:44:16:28:44 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:40 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:35:0%:67:1E0:49:35:21:14:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:27 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:23 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 1/1:48:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:43 0/0:0:0:0:0:18:0%:32:1E0:52:18:9:9:18 0/0:0:0:0:0:51:0%:97:1E0:44:51:22:29:52 0/0:0:0:0:0:27:0%:52:1E0:46:27:19:8:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:22:7:29 0/0:0:0:0:0:38:0%:70:1E0:48:38:24:14:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:0:0:0:0:52:0%:96:1E0:44:52:20:32:52 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 1/1:45:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:34 0/0:0:0:0:0:43:0%:82:1E0:47:43:27:16:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:46 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:40 0/0:0:0:0:0:73:0%:99:1E0:46:73:33:40:75 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:52:0%:96:1E0:43:52:29:23:52 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:25:13:38 0/0:30:1:1:0:19:5.26%:28:5E-1:43:18:10:8:19 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:43:0%:82:1E0:47:43:17:26:44 0/0:0:0:0:0:22:0%:40:1E0:46:22:15:7:22 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:53 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:50 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:11:28:39 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:48 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:45:0%:85:1E0:45:45:27:18:45 0/0:0:0:0:0:59:0%:99:1E0:47:59:31:28:59 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:18:0%:32:1E0:46:18:7:11:18 0/0:0:0:0:0:14:0%:25:1E0:45:14:6:8:14 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:44 0/0:0:0:0:0:28:0%:51:1E0:49:28:18:10:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 1/1:46:45:15:30:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:39:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:39 0/0:39:1:0:1:30:3.33%:44:5E-1:44:29:17:12:30 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:30 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:44 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:23:0%:44:1E0:46:23:7:16:24 0/0:0:0:0:0:39:0%:74:1E0:48:39:15:24:41 0/0:38:1:1:0:33:3.03%:52:5E-1:49:32:13:19:34 1/1:46:40:21:19:41:97.56%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:51 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:30 0/0:0:0:0:0:58:0%:99:1E0:44:58:24:34:60 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:34 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:38 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:48 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:35 0/0:0:0:0:0:53:0%:99:1E0:39:53:28:25:53 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:51:0%:97:1E0:40:51:26:25:52 1/1:40:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:62 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 1/1:40:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:49:0%:93:1E0:41:49:25:24:50 0/0:0:0:0:0:43:0%:82:1E0:38:43:20:23:46 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:40 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:42 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:40 1/1:38:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:45 0/0:37:1:1:0:33:3.03%:52:5E-1:39:32:17:15:36 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 1/1:41:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:42:0%:77:1E0:38:42:28:14:46 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:43 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:39 MTB_anc 911261 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0818_Rv0818|gene837|transcript|Transcript_gene837|Coding|1/1|c.290C>T|p.Pro97Leu|290/768|290/768|97/255||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.911261C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.911261C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:31:5:26:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:38:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:41:9:32:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:48 1/1:38:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:49:15:34:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:48:11:37:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:41 1/1:36:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:32:4:28:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:47:12:35:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:35:7:28:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:45:10:35:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:37:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:36 1/1:36:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:47:12:35:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:39:31:6:25:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:32:5:27:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:44:12:32:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 MTB_anc 913274 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|phoT_Rv0820|gene839|transcript|Transcript_gene839|Coding|1/1|c.549G>C|p.Ser183Ser|549/777|549/777|183/258||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.913274G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.913274G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.913274G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:32:11:21:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:50:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:46:20:26:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:35:16:19:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:26:14:12:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:17:16:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:52:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:45:12:33:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:67:26:41:67:100%:99:6.6743E-40:0:0:0:0:70 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:18:18:37:97.3%:99:2.2598E-21:0:0:0:0:40 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:36:16:20:37:97.3%:99:2.1762E-20:39:1:1:0:37 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 MTB_anc 916046 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0822c_Rv0822c|gene841|transcript|Transcript_gene841|Coding|1/1|c.266C>A|p.Pro89His|266/2055|266/2055|89/684||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.916046G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.916046G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:50:8:42:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:39:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:37:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:31:5:26:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:52:16:36:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:44:11:33:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 916341 . C T . PASS AC=68;AF=0.227;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0822c_Rv0822c-Rv0823c_Rv0823c|gene841-gene842|intergenic_region|gene841-gene842|||n.916341C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:29 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:17 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:19 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:22 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:35 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:44:0%:81:1E0:40:44:15:29:44 0/0:0:0:0:0:10:0%:17:1E0:41:10:7:3:10 0/0:0:0:0:0:39:0%:74:1E0:39:39:22:17:42 1/1:35:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:27 0/0:0:0:0:0:45:0%:85:1E0:38:45:22:23:46 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:39 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:28 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:14 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:36 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:33 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:46 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:37 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:36 1/1:37:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:27:16:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:21 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/0:60:1:0:1:27:3.7%:41:5E-1:43:26:13:13:28 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:20 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:40 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:27 0/0:0:0:0:0:53:0%:99:1E0:39:53:30:23:53 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:41 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:39:0%:74:1E0:42:39:13:26:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:11:25:37 0/0:38:1:1:0:34:2.94%:51:5E-1:42:33:20:13:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:34 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:28 0/0:0:0:0:0:16:0%:29:1E0:40:16:10:6:16 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:39 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:39 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:15 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:32:0%:59:1E0:49:32:11:21:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:49:0%:93:1E0:37:49:27:22:50 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:31 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:44 0/0:0:0:0:0:26:0%:47:1E0:40:26:18:8:26 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:26 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:17:0%:33:1E0:47:17:5:12:18 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:20 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:33:1:0:1:48:2.08%:76:5E-1:37:47:24:23:51 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:30 0/0:0:0:0:0:49:0%:93:1E0:42:49:20:29:50 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:41 0/0:0:0:0:0:21:0%:40:1E0:37:21:14:7:23 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:16 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:32:1:0:1:34:2.94%:51:5E-1:40:33:22:11:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:22 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:24:15:9:25:96%:99:2.0568E-13:38:1:1:0:27 1/1:35:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:27 0/0:0:0:0:0:15:0%:29:1E0:38:15:14:1:16 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:42:0%:77:1E0:39:42:21:21:44 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:36 0/0:0:0:0:0:25:0%:48:1E0:38:25:8:17:26 0/0:0:0:0:0:44:0%:81:1E0:37:44:25:19:46 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:34:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:27 1/1:36:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:36 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:16 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:27 1/1:36:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 0/0:0:0:0:0:22:0%:40:1E0:39:22:15:7:23 0/0:0:0:0:0:19:0%:37:1E0:36:19:15:4:19 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:41:0%:78:1E0:38:41:24:17:41 0/0:0:0:0:0:24:0%:44:1E0:39:24:17:7:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:37 0/0:0:0:0:0:43:0%:82:1E0:40:43:28:15:44 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:22 MTB_anc 917905 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|desA1_Rv0824c|gene843|transcript|Transcript_gene843|Coding|1/1|c.846G>T|p.Gly282Gly|846/1017|846/1017|282/338||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.917905C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.917905C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:49:21:28:49:100%:99:3.925E-29:0:0:0:0:52 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:40:14:26:41:97.56%:99:9.8874E-23:39:1:0:1:44 1/1:50:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:54:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:66:26:40:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:45:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:49:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:49:17:32:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:49:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:61:26:35:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:52:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:51:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:29 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:55 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:38:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:52 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:41:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:70:37:33:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:43:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:49:31:18:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 919574 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|Rv0825c_Rv0825c-Rv0826_Rv0826|gene845-gene846|intergenic_region|gene845-gene846|||n.919574T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:22:18:41:97.56%:99:9.8874E-23:35:1:1:0:41 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:38:20:18:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:61:33:28:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:52:35:17:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:47:25:22:48:97.92%:99:7.6145E-27:60:1:1:0:49 1/1:49:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:29:18:11:30:96.67%:99:2.6212E-16:39:1:1:0:30 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:22:16:39:97.44%:99:1.4697E-21:38:1:0:1:39 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:49:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:61:33:28:61:100%:99:2.609E-36:0:0:0:0:62 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:67:31:36:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:50 1/1:38:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:60:28:32:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 921390 . T C . PASS AC=42;AF=0.140;AN=300;ANN=C|missense_variant|MODERATE|Rv0828c_Rv0828c|gene848|transcript|Transcript_gene848|Coding|1/1|c.224A>G|p.Glu75Gly|224/423|224/423|75/140||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.921390T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.921390T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:39:43:17:26:44 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:51:0%:97:1E0:45:51:32:19:51 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:40 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:40 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:44:0%:81:1E0:41:44:18:26:45 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:60:0%:99:1E0:39:60:27:33:60 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:45 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:37 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:20:0%:37:1E0:47:19:7:12:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:13:27:40 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:71:0%:99:1E0:44:71:37:34:71 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:42 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:44:0%:81:1E0:40:44:14:30:45 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:38 0/0:0:0:0:0:54:0%:99:1E0:44:54:24:30:55 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:14:28:42 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:47:0%:89:1E0:47:47:25:22:47 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:73:0%:99:1E0:42:73:30:43:73 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:47 0/0:0:0:0:0:14:0%:25:1E0:46:14:7:7:14 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:20 0/0:0:0:0:0:41:0%:78:1E0:47:41:17:24:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:11:25:36 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 1/1:44:41:13:28:42:97.62%:99:2.5612E-23:38:1:0:1:43 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:24 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:41 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:37 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 1/1:42:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:11:25:36 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:57:0%:99:1E0:39:57:26:31:58 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:38:0%:70:1E0:42:38:14:24:39 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:49 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:40 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:20 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:42 0/0:0:0:0:0:45:0%:85:1E0:39:45:21:24:45 0/0:0:0:0:0:43:0%:82:1E0:38:43:18:25:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:54:0%:99:1E0:41:54:25:29:57 0/0:0:0:0:0:56:0%:99:1E0:39:56:22:34:56 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:33 0/0:0:0:0:0:48:0%:89:1E0:41:48:18:30:52 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:33 0/0:0:0:0:0:58:0%:99:1E0:40:58:27:31:60 0/0:0:0:0:0:36:0%:66:1E0:37:36:14:22:37 0/0:0:0:0:0:40:0%:74:1E0:38:40:19:21:40 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:33 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:39 0/0:0:0:0:0:41:0%:78:1E0:41:41:26:15:43 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:44 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:52:0%:96:1E0:40:52:21:31:52 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:43 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:57:0%:99:1E0:41:57:21:36:58 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:55:0%:99:1E0:41:55:28:27:55 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:24 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:37 0/0:0:0:0:0:49:0%:93:1E0:40:49:17:32:51 1/1:40:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 923065 . T A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0831c_Rv0831c|gene850|transcript|Transcript_gene850|Coding|1/1|c.645A>T|p.Gly215Gly|645/816|645/816|215/271||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.923065T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.923065T>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:53:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:43:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:75:39:36:75:100%:99:1.0773E-44:0:0:0:0:77 1/1:47:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:49:16:33:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:65:20:45:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:59:23:36:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:48:34:14:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 924534 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|intergenic_region|MODIFIER|pheU_Rvnt13-PE_PGRS12_Rv0832|gene854-gene855|intergenic_region|gene854-gene855|||n.924534C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:27 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:0:0:0:0:46:0%:85:1E0:38:46:15:31:46 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:32 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:34 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:10:20:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:29 0/0:0:0:0:0:38:0%:70:1E0:37:38:14:24:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:32:0%:59:1E0:37:32:5:27:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:31 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:0:0:0:0:15:0%:29:1E0:43:15:9:6:15 0/0:0:0:0:0:16:0%:29:1E0:40:16:5:11:16 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:14:0%:25:1E0:37:14:4:10:14 0/0:0:0:0:0:41:0%:78:1E0:38:41:14:27:41 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:27 0/0:0:0:0:0:39:0%:74:1E0:37:39:13:26:39 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:23 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:18 0/0:0:0:0:0:20:0%:36:1E0:39:20:6:14:20 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:31 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:33 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:37 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:35 0/0:0:0:0:0:29:0%:55:1E0:38:29:7:22:29 0/0:0:0:0:0:50:0%:92:1E0:38:50:16:34:53 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:33 0/0:33:1:0:1:45:2.22%:73:5E-1:38:44:17:27:45 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:27 0/0:39:1:1:0:23:4.35%:34:5E-1:38:22:5:17:23 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:0:0:0:0:21:0%:40:1E0:39:21:6:15:21 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:5:16:21 0/0:0:0:0:0:44:0%:81:1E0:37:44:19:25:47 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:32 0/0:0:0:0:0:14:0%:25:1E0:37:14:2:12:14 0/0:0:0:0:0:33:0%:63:1E0:38:33:10:23:33 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:15 0/0:0:0:0:0:20:0%:36:1E0:38:20:5:15:21 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:14 0/0:0:0:0:0:42:0%:77:1E0:37:42:15:27:42 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:27 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:18 0/0:0:0:0:0:22:0%:40:1E0:40:22:5:17:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:8:22:30 0/0:0:0:0:0:15:0%:29:1E0:39:15:9:6:15 0/0:0:0:0:0:28:0%:51:1E0:37:28:8:20:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:38:32:4:28:32 0/0:0:0:0:0:45:0%:85:1E0:38:45:17:28:47 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:31 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:19 0/0:0:0:0:0:23:0%:44:1E0:43:23:6:17:23 0/0:0:0:0:0:32:0%:59:1E0:38:32:10:22:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:29 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:24 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:28 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:6:19:25 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:20 0/0:0:0:0:0:24:0%:44:1E0:39:24:4:20:25 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:25 0/0:0:0:0:0:35:0%:67:1E0:38:35:10:25:37 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:17 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:23 0/0:0:0:0:0:23:0%:44:1E0:38:23:10:13:23 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:5:13:18 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:27 1/1:38:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 0/0:0:0:0:0:38:0%:70:1E0:37:38:15:23:39 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:34 0/0:0:0:0:0:34:0%:62:1E0:37:34:10:24:35 0/0:0:0:0:0:14:0%:25:1E0:38:14:5:9:14 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:25 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:37:26:8:18:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:29:0%:55:1E0:40:29:9:20:30 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:24 0/0:0:0:0:0:28:0%:51:1E0:36:28:7:21:30 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:30 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:26 0/0:0:0:0:0:16:0%:29:1E0:39:16:6:10:16 0/0:0:0:0:0:35:0%:67:1E0:37:35:12:23:35 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:6:19:25 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:20 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:29 0/0:0:0:0:0:37:0%:70:1E0:36:37:8:29:37 0/0:0:0:0:0:24:0%:44:1E0:37:24:6:18:26 0/0:0:0:0:0:33:0%:63:1E0:37:33:8:25:34 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:17 0/0:0:0:0:0:51:0%:97:1E0:37:51:13:38:52 0/0:0:0:0:0:33:0%:63:1E0:37:33:12:21:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:26 0/0:0:0:0:0:27:0%:52:1E0:36:27:10:17:27 0/0:0:0:0:0:38:0%:70:1E0:38:38:11:27:38 0/0:0:0:0:0:28:0%:51:1E0:36:28:6:22:28 0/0:0:0:0:0:39:0%:74:1E0:37:39:7:32:41 0/0:0:0:0:0:28:0%:51:1E0:37:28:6:22:29 0/0:0:0:0:0:30:0%:55:1E0:37:30:10:20:32 0/0:0:0:0:0:29:0%:55:1E0:37:29:10:19:29 0/0:0:0:0:0:34:0%:62:1E0:37:34:11:23:36 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:16 0/0:0:0:0:0:38:0%:70:1E0:37:38:10:28:42 0/0:0:0:0:0:33:0%:63:1E0:37:33:12:21:37 0/0:0:0:0:0:20:0%:36:1E0:37:20:3:17:21 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:26 0/0:0:0:0:0:44:0%:81:1E0:37:44:13:31:46 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:27 0/0:0:0:0:0:33:0%:63:1E0:36:33:8:25:33 0/0:0:0:0:0:18:0%:32:1E0:38:18:3:15:20 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:25 0/0:0:0:0:0:35:0%:67:1E0:37:35:14:21:35 0/0:0:0:0:0:27:0%:52:1E0:37:27:7:20:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:19 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:30 0/0:0:0:0:0:50:0%:92:1E0:40:50:23:27:51 0/0:37:1:0:1:32:3.12%:48:5E-1:39:31:7:24:35 0/0:0:0:0:0:29:0%:55:1E0:37:29:9:20:29 MTB_anc 925100 . G A . PASS AC=14;AF=0.047;AN=300;ANN=A|synonymous_variant|LOW|PE_PGRS12_Rv0832|gene855|transcript|Transcript_gene855|Coding|1/1|c.150G>A|p.Ala50Ala|150/414|150/414|50/137||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.925100G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.925100G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:46 0/0:0:0:0:0:15:0%:29:1E0:46:15:8:7:15 0/0:0:0:0:0:42:0%:77:1E0:45:42:27:15:42 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:18 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:7:18:25 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:19 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:60:1:1:0:40:2.5%:62:5E-1:41:39:16:23:41 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:41 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:48 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 0/0:0:0:0:0:18:0%:32:1E0:47:18:12:6:18 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:18:0%:32:1E0:42:18:4:14:18 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:50:1:1:0:31:3.23%:48:5E-1:40:30:20:10:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:30 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:71:0%:99:1E0:43:71:32:39:71 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:37 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:20:11:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:27 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:43 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:38:1:1:0:50:2%:80:5E-1:37:49:24:25:50 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:35 0/0:0:0:0:0:23:0%:44:1E0:51:23:15:8:23 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:49 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:46 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:62:0%:99:1E0:41:62:27:35:62 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:51:0%:97:1E0:41:51:17:34:51 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:21 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:48 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:32 0/0:0:0:0:0:39:0%:74:1E0:39:39:25:14:40 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:8:14:23 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:17 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:33 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:26:10:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:45 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:42 0/0:0:0:0:0:21:0%:40:1E0:39:21:13:8:21 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:36 0/0:0:0:0:0:35:0%:67:1E0:38:35:12:23:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:42 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:39:1:1:0:42:2.38%:66:5E-1:40:41:22:19:42 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:35 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:45 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:36:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:31 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:38 0/0:0:0:0:0:47:0%:89:1E0:39:47:25:22:49 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:29 0/0:0:0:0:0:28:0%:51:1E0:38:28:18:10:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:34 0/0:0:0:0:0:27:0%:52:1E0:36:27:10:17:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:26 0/0:0:0:0:0:41:0%:78:1E0:38:41:21:20:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:44:0%:81:1E0:41:44:13:31:45 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:27 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:29 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:23 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:29 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:41 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:53 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:25 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:18 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:36:35:14:21:36 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:44:0%:81:1E0:37:44:20:24:46 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:22 MTB_anc 927072 . G C . PASS AC=99;AF=0.990;AN=100;ANN=C|missense_variant|MODERATE|PE_PGRS13_Rv0833|gene856|transcript|Transcript_gene856|Coding|1/1|c.1712G>C|p.Gly571Ala|1712/2250|1712/2250|571/749||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.927072G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.927072G>C||||||;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:13:3:10:14:92.86%:64:3.7391E-7:20:1:1:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:7:0:7:8:87.5%:31:6.993E-4:26:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:30:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:0:10:11:90.91%:47:1.7011E-5:32:1:1:0:12 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:32:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:11:4:7:12:100%:58:1.4176E-6:0:0:0:0:14 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:41:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:32:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:16:3:13:17:94.12%:87:1.6637E-9:0:0:0:0:21 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:15 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 927073 . G C . PASS AC=114;AF=1.00;AN=114;ANN=C|synonymous_variant|LOW|PE_PGRS13_Rv0833|gene856|transcript|Transcript_gene856|Coding|1/1|c.1713G>C|p.Gly571Gly|1713/2250|1713/2250|571/749||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.927073G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.927073G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:33:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:13:5:8:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:42:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 927496 . TAACGGCGGC T . PASS AC=186;AF=0.694;AN=268;ANN=T|disruptive_inframe_deletion|MODERATE|PE_PGRS13_Rv0833|gene856|transcript|Transcript_gene856|Coding|1/1|c.2151_2159delCGGCAACGG|p.Gly718_Gly720del|2151/2250|2151/2250|717/749||INFO_REALIGN_3_PRIME,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.927497_927505delAACGGCGGC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.927497_927505delAACGGCGGC||||||;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:15:9:6:16:93.75%:75:2.8282E-8:32:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:19:5:14:20:90.48%:93:4.7003E-10:34:2:2:0:21 0/1:36:6:1:5:7:85.71%:26:2.331E-3:32:1:0:1:7 1/1:33:11:3:8:11:91.67%:53:4.8074E-6:32:1:0:1:12 0/1:36:6:1:5:8:75%:24:3.4965E-3:36:2:1:1:9 0/1:37:13:5:8:15:81.25%:57:1.6121E-6:35:3:1:2:16 0/1:36:6:2:4:8:75%:24:3.4965E-3:35:2:0:2:8 0/1:36:9:0:9:12:75%:37:1.6826E-4:35:3:0:3:13 1/1:41:11:1:10:12:91.67%:53:4.8074E-6:33:1:0:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:15:5:10:16:83.33%:68:1.4655E-7:31:3:2:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:5:7:11:92.31%:58:1.3461E-6:36:1:1:0:13 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:37:8:1:7:9:88.89%:36:2.0568E-4:38:1:0:1:9 1/1:35:9:4:5:10:90%:42:5.9538E-5:29:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:1:5:8:75%:24:3.4965E-3:34:2:0:2:8 1/1:37:11:3:8:10:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:23:7:16:23:95.83%:99:7.7525E-13:34:1:0:1:25 0/1:42:15:5:10:17:88.24%:71:7.3277E-8:35:2:1:1:17 1/1:37:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:38:17:8:9:19:89.47%:82:5.9414E-9:38:2:1:1:19 0/1:43:8:3:5:10:80%:34:3.5723E-4:38:2:0:2:10 0/1:37:8:3:5:12:66.67%:31:6.7304E-4:32:4:4:0:12 0/1:35:17:4:13:19:85%:78:1.2848E-8:36:3:0:3:21 0/1:36:19:5:14:23:82.61%:86:2.1316E-9:34:4:2:2:23 0/1:37:15:5:10:17:88.24%:71:7.3277E-8:38:2:0:2:19 0/1:39:11:3:8:13:84.62%:49:1.0096E-5:33:2:0:2:13 1/1:36:14:6:8:15:93.33%:69:1.0315E-7:36:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:7:4:3:9:77.78%:29:1.1312E-3:38:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:22:8:14:25:84.62%:99:5.5261E-11:34:4:2:2:26 0/1:38:16:7:9:21:76.19%:69:1.2221E-7:32:5:2:3:22 1/1:37:25:9:16:27:92.59%:99:2.0853E-13:38:2:0:2:27 1/1:38:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:17 0/1:37:20:4:16:24:83.33%:91:6.3493E-10:33:4:3:1:24 1/1:35:20:6:14:21:90.91%:98:1.3117E-10:36:2:1:1:22 1/1:41:12:3:9:13:92.31%:58:1.3461E-6:34:1:1:0:13 1/1:35:13:2:11:12:100%:70:9.6148E-8:0:0:0:0:14 0/1:35:15:3:12:16:88.24%:71:7.3277E-8:36:2:1:1:17 0/1:40:6:2:4:14:42.86%:20:7.971E-3:34:8:5:3:14 1/1:39:18:8:10:19:94.74%:92:5.6585E-10:27:1:1:0:19 0/1:35:15:4:11:19:75%:64:3.8543E-7:32:5:5:0:22 0/1:36:6:4:2:9:66.67%:23:4.5249E-3:36:3:2:1:9 0/1:37:10:4:6:12:83.33%:44:3.3652E-5:29:2:1:1:12 0/1:38:13:4:9:15:86.67%:60:8.7675E-7:36:2:1:1:15 0/1:37:6:0:6:7:85.71%:26:2.331E-3:36:1:1:0:7 0/1:35:17:5:12:20:80.95%:76:2.3502E-8:33:4:1:3:22 0/1:32:8:3:5:10:72.73%:32:5.16E-4:34:3:1:2:11 1/1:37:10:4:6:9:100%:52:5.4125E-6:0:0:0:0:10 0/1:38:12:3:9:14:85.71%:55:2.9913E-6:35:2:1:1:14 0/1:37:15:8:7:18:83.33%:68:1.4655E-7:35:3:2:1:19 0/1:36:12:2:10:14:85.71%:55:2.9913E-6:35:2:1:1:15 0/1:42:9:4:5:13:69.23%:36:2.2883E-4:36:4:1:3:13 0/1:35:22:10:12:25:84.62%:99:5.5261E-11:36:4:1:3:26 0/1:38:16:6:10:20:80%:73:4.357E-8:38:3:1:2:21 0/1:36:12:3:9:15:80%:52:5.2605E-6:36:3:1:2:15 1/1:36:9:4:5:10:90%:42:5.9538E-5:36:1:1:0:11 1/1:36:15:2:13:16:93.75%:75:2.8282E-8:24:1:1:0:18 0/1:40:13:7:6:14:86.67%:60:8.7675E-7:33:2:0:2:15 0/1:38:13:1:12:19:68.42%:53:5.0106E-6:34:6:2:4:19 0/1:38:18:8:10:21:85.71%:84:3.7603E-9:35:3:2:1:22 1/1:33:8:1:7:7:100%:41:7.77E-5:0:0:0:0:8 0/1:38:14:4:10:19:73.68%:59:1.2025E-6:36:5:1:4:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:14:4:10:16:87.5%:65:2.5454E-7:32:2:1:1:16 1/1:36:10:3:7:11:90.91%:47:1.7011E-5:32:1:1:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:17:7:10:19:89.47%:82:5.9414E-9:36:2:0:2:19 0/1:36:25:7:18:27:89.29%:99:5.8768E-13:35:3:1:2:28 0/1:41:9:3:6:11:81.82%:39:1.1057E-4:32:2:0:2:11 0/1:38:14:4:10:16:87.5%:65:2.5454E-7:35:2:1:1:16 0/1:41:12:4:8:14:85.71%:55:2.9913E-6:31:2:1:1:14 1/1:36:18:4:14:20:90%:87:1.6758E-9:31:2:1:1:20 0/1:38:7:2:5:10:70%:28:1.548E-3:35:3:1:2:10 1/1:40:12:4:8:13:92.31%:58:1.3461E-6:60:1:0:1:13 1/1:38:18:8:10:20:90%:87:1.6758E-9:35:2:1:1:20 0/1:36:10:1:9:12:83.33%:44:3.3652E-5:35:2:0:2:12 0/1:37:14:4:10:16:87.5%:65:2.5454E-7:38:2:0:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:15:5:10:16:93.75%:75:2.8282E-8:36:1:0:1:16 1/1:39:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:39:7:1:6:8:87.5%:31:6.993E-4:36:1:1:0:8 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 0/1:36:8:3:5:9:88.89%:36:2.0568E-4:38:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:9:1:8:10:90%:42:5.9538E-5:38:1:0:1:11 1/1:36:22:5:17:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 0/1:37:22:5:17:28:78.57%:97:1.7583E-10:34:6:2:4:28 1/1:35:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 0/1:34:11:3:8:12:84.62%:49:1.0096E-5:38:2:1:1:13 1/1:36:21:1:20:22:91.3%:99:3.6437E-11:33:2:2:0:23 0/1:35:15:2:13:19:78.95%:66:2.5053E-7:35:4:0:4:20 0/1:36:12:3:9:17:70.59%:49:1.1285E-5:33:5:4:1:17 0/1:36:15:1:14:18:83.33%:68:1.4655E-7:36:3:2:1:18 0/1:32:21:3:18:22:84%:97:1.8789E-10:35:4:0:4:25 0/1:34:17:4:13:20:80.95%:76:2.3502E-8:35:4:1:3:22 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:16 0/1:35:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:35:10:2:8:12:83.33%:44:3.3652E-5:31:2:2:0:13 0/1:36:15:6:9:17:88.24%:71:7.3277E-8:32:2:0:2:17 1/1:36:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:20 0/1:36:14:3:11:19:73.68%:59:1.2025E-6:37:5:4:1:19 0/1:29:11:0:11:12:73.33%:46:2.4988E-5:35:4:4:0:17 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:19:8:11:20:95%:98:1.5234E-10:38:1:0:1:20 0/1:36:7:0:7:11:63.64%:27:1.935E-3:36:4:1:3:11 1/1:36:24:4:20:25:92.31%:99:7.6222E-13:35:2:0:2:27 1/1:36:12:2:10:13:92.31%:58:1.3461E-6:32:1:1:0:13 1/1:34:21:6:15:21:91.3%:99:3.6437E-11:35:2:0:2:23 0/1:36:11:2:9:13:84.62%:49:1.0096E-5:35:2:1:1:13 1/1:38:22:3:19:22:95.65%:99:2.9149E-12:36:1:1:0:23 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:36:7:3:4:10:70%:28:1.548E-3:35:3:3:0:10 0/1:39:17:2:15:19:89.47%:82:5.9414E-9:34:2:1:1:19 0/1:36:16:2:14:19:84.21%:73:4.357E-8:28:3:3:0:19 0/1:35:7:5:2:10:70%:28:1.548E-3:35:3:2:1:12 0/1:36:7:3:4:10:70%:28:1.548E-3:35:3:1:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:33:7:3:4:9:77.78%:29:1.1312E-3:35:2:0:2:10 0/1:37:7:3:4:13:53.85%:25:2.6087E-3:36:6:2:4:13 0/1:35:7:1:6:10:70%:28:1.548E-3:33:3:1:2:10 0/1:33:10:3:7:11:83.33%:44:3.3652E-5:33:2:1:1:12 0/1:36:7:2:5:9:77.78%:29:1.1312E-3:33:2:1:1:10 1/1:34:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 0/1:35:7:3:4:9:77.78%:29:1.1312E-3:34:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:4:9:14:92.86%:64:3.7391E-7:36:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:12:4:8:14:80%:52:5.2605E-6:34:3:1:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:39:16:5:11:17:94.12%:81:7.7134E-9:38:1:1:0:17 0/1:38:10:3:7:14:71.43%:41:7.6278E-5:31:4:3:1:15 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 0/1:39:8:3:5:9:88.89%:36:2.0568E-4:36:1:1:0:9 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:37:6:0:6:8:75%:24:3.4965E-3:34:2:0:2:8 0/1:37:10:2:8:13:76.92%:42:5.3843E-5:36:3:1:2:14 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:37:14:2:12:17:82.35%:63:4.8851E-7:33:3:1:2:17 1/1:38:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:30:6:24:31:90.91%:99:9.89E-16:34:3:0:3:33 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 MTB_anc 928158 . CTCGCCGCCG C . PASS AC=167;AF=0.564;AN=296;ANN=C|disruptive_inframe_deletion|MODERATE|PE_PGRS14_Rv0834c|gene857|transcript|Transcript_gene857|Coding|1/1|c.2319_2327delCGGCGGCGA|p.Asp773_Gly775del|2327/2649|2319/2649|773/882||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.928159_928167delTCGCCGCCG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.928159_928167delTCGCCGCCG||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:35:26:18:8:30:81.25%:99:1.5064E-12:33:6:2:4:32 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:38:33:24:9:37:86.84%:99:1.3966E-16:34:5:1:4:39 0/1:39:8:3:5:10:80%:34:3.5723E-4:35:2:0:2:10 0/1:37:19:12:7:24:79.17%:84:3.6826E-9:36:5:1:4:24 1/1:38:10:5:5:10:90.91%:47:1.7011E-5:32:1:0:1:11 0/1:41:20:13:7:26:74.07%:85:2.7631E-9:36:7:1:6:27 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:38:17:14:3:19:80.95%:76:2.3502E-8:36:4:2:2:21 0/1:43:18:9:9:23:78.26%:79:1.1937E-8:40:5:2:3:23 0/1:39:15:11:4:19:78.95%:66:2.5053E-7:35:4:3:1:19 1/1:37:30:19:11:32:93.75%:99:3.0612E-16:34:2:0:2:33 1/1:37:11:5:6:12:91.67%:53:4.8074E-6:33:1:0:1:12 0/1:37:28:16:12:33:82.35%:99:1.349E-13:35:6:3:3:34 0/1:35:15:10:5:17:88.24%:71:7.3277E-8:37:2:0:2:18 0/1:41:16:7:9:19:84.21%:73:4.357E-8:35:3:0:3:20 1/1:38:9:8:1:10:90%:42:5.9538E-5:38:1:0:1:10 0/1:37:13:8:5:15:86.67%:60:8.7675E-7:35:2:1:1:15 0/1:36:17:10:7:22:77.27%:74:3.8368E-8:36:5:4:1:22 0/1:36:15:4:11:18:78.95%:66:2.5053E-7:36:4:1:3:19 1/1:36:11:5:6:12:91.67%:53:4.8074E-6:37:1:1:0:12 0/1:43:17:7:10:19:89.47%:82:5.9414E-9:37:2:0:2:20 0/1:38:23:9:14:29:79.31%:99:5.3984E-11:35:6:2:4:29 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:40:26:14:12:29:89.66%:99:1.6496E-13:36:3:1:2:29 0/1:40:27:16:11:34:79.41%:99:4.5192E-13:35:6:2:4:34 0/0:41:5:3:2:14:35.71%:4:2.037E-2:39:9:3:6:14 0/1:40:23:19:4:28:82.14%:99:3.103E-11:42:5:2:3:28 0/1:43:13:4:9:19:68.42%:53:5.0106E-6:40:6:2:4:19 0/1:38:24:15:9:28:85.71%:99:4.7015E-12:34:4:2:2:28 0/1:38:26:12:14:34:76.47%:99:4.1482E-12:38:8:4:4:35 0/1:34:20:14:6:24:80%:89:1.1273E-9:44:5:1:4:25 0/1:37:20:13:7:28:71.43%:84:3.9563E-9:39:8:4:4:28 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 0/1:42:22:11:11:28:78.57%:97:1.7583E-10:33:6:2:4:28 1/1:36:24:10:14:25:92.31%:99:7.6222E-13:35:2:0:2:26 0/1:38:23:10:13:26:88.46%:99:7.3681E-12:34:3:0:3:26 0/1:38:36:20:16:41:87.8%:99:3.2269E-18:38:5:3:2:41 0/1:35:28:18:10:31:84.85%:99:6.9527E-14:34:5:1:4:33 0/1:38:35:16:19:39:85.37%:99:2.5278E-17:34:6:4:2:41 0/1:38:19:9:10:26:73.08%:80:8.6144E-9:35:7:3:4:26 0/1:41:23:17:6:27:85.19%:99:1.6161E-11:36:4:1:3:28 0/1:39:22:13:9:25:88%:99:2.5916E-11:36:3:2:1:25 0/1:33:15:6:9:19:75%:64:3.8543E-7:36:5:3:2:20 0/1:36:26:15:11:28:89.66%:99:1.6496E-13:56:3:1:2:30 0/1:36:27:8:19:29:87.1%:99:1.125E-13:36:4:1:3:33 0/1:39:23:13:10:31:74.19%:98:1.3219E-10:38:8:3:5:34 0/1:40:15:6:9:22:68.18%:61:7.4178E-7:35:7:2:5:22 0/1:40:27:16:11:32:84.38%:99:2.3785E-13:33:5:1:4:32 1/1:37:27:12:15:29:93.1%:99:1.5465E-14:38:2:0:2:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:27:15:12:29:90%:99:4.6134E-14:49:3:1:2:31 0/1:43:17:10:7:21:80.95%:76:2.3502E-8:37:4:1:3:21 0/1:34:15:10:5:16:88.24%:71:7.3277E-8:37:2:1:1:17 0/1:37:15:11:4:19:78.95%:66:2.5053E-7:36:4:2:2:19 0/1:36:22:14:8:25:81.48%:99:1.0343E-10:43:5:2:3:27 0/1:38:11:6:5:19:55%:41:7.2653E-5:37:9:3:6:20 0/1:35:14:9:5:18:77.78%:60:8.0605E-7:34:4:2:2:18 0/1:36:15:9:6:18:83.33%:68:1.4655E-7:36:3:0:3:18 0/1:36:26:12:14:31:81.25%:99:1.5064E-12:35:6:1:5:32 0/1:39:29:13:16:34:85.29%:99:2.0235E-14:35:5:0:5:35 0/1:38:37:22:15:42:88.1%:99:9.1365E-19:38:5:3:2:42 0/1:35:13:9:4:15:86.67%:60:8.7675E-7:32:2:0:2:16 0/1:34:14:7:7:19:73.68%:59:1.2025E-6:35:5:2:3:19 0/1:37:27:17:10:33:79.41%:99:7.9014E-13:38:7:4:3:34 0/1:37:27:18:9:32:84.38%:99:2.3785E-13:39:5:3:2:32 0/1:39:17:9:8:21:80.95%:76:2.3502E-8:35:4:2:2:21 0/1:38:30:15:15:40:75%:99:9.555E-14:36:10:5:5:40 0/1:39:15:5:10:18:83.33%:68:1.4655E-7:37:3:0:3:18 0/1:41:6:3:3:9:66.67%:23:4.5249E-3:51:3:2:1:10 0/1:37:18:10:8:21:81.82%:81:7.1052E-9:38:4:2:2:23 0/1:42:17:12:5:20:85%:78:1.2848E-8:36:3:1:2:20 0/1:42:16:5:11:19:84.21%:73:4.357E-8:37:3:1:2:19 0/1:38:11:5:6:13:84.62%:49:1.0096E-5:36:2:0:2:13 0/1:38:20:13:7:24:80%:89:1.1273E-9:35:5:1:4:26 0/1:39:19:14:5:25:76%:82:5.8245E-9:31:6:4:2:25 0/1:38:18:9:9:26:69.23%:74:3.6611E-8:36:8:3:5:26 0/1:37:18:10:8:23:78.26%:79:1.1937E-8:35:5:1:4:23 0/1:34:20:12:8:23:86.96%:95:3.1579E-10:34:3:1:2:23 0/1:36:16:8:8:19:80%:71:7.7086E-8:37:4:1:3:20 0/1:38:14:9:5:17:77.78%:60:8.0605E-7:41:4:2:2:18 0/1:34:19:12:7:26:73.08%:80:8.6144E-9:34:7:4:3:27 0/1:35:20:13:7:23:86.96%:95:3.1579E-10:35:3:0:3:23 0/1:38:18:12:6:23:78.26%:79:1.1937E-8:35:5:2:3:23 0/1:37:12:7:5:20:60%:46:2.2548E-5:36:8:3:5:20 0/1:38:24:10:14:29:82.76%:99:9.2544E-12:35:5:1:4:29 1/1:36:20:12:8:21:90.91%:98:1.3117E-10:32:2:1:1:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:38:23:15:8:25:92%:99:2.7767E-12:34:2:2:0:25 0/1:38:16:8:8:18:84.21%:73:4.357E-8:37:3:0:3:20 0/1:38:24:16:8:30:80%:99:1.647E-11:35:6:0:6:30 0/1:42:17:8:9:19:89.47%:82:5.9414E-9:38:2:0:2:19 0/1:36:37:26:11:45:82.22%:99:8.5365E-18:33:8:3:5:45 0/1:37:16:12:4:18:84.21%:73:4.357E-8:35:3:2:1:19 0/1:37:39:18:21:48:81.25%:99:1.398E-18:39:9:4:5:48 0/1:41:14:8:6:17:82.35%:63:4.8851E-7:34:3:2:1:17 0/1:39:10:7:3:12:83.33%:44:3.3652E-5:34:2:1:1:12 0/1:39:25:17:8:34:73.53%:99:1.9819E-11:35:9:4:5:34 0/1:36:24:15:9:29:82.76%:99:9.2544E-12:34:5:1:4:29 0/1:37:21:14:7:25:84%:97:1.8789E-10:41:4:1:3:25 0/1:39:14:6:8:19:73.68%:59:1.2025E-6:32:5:2:3:19 0/1:38:27:14:13:31:84.38%:99:2.3785E-13:34:5:2:3:32 0/1:39:14:11:3:20:66.67%:56:2.1998E-6:36:7:2:5:21 0/1:34:22:17:5:24:88%:99:2.5916E-11:35:3:1:2:25 0/1:38:11:8:3:14:78.57%:47:1.6951E-5:36:3:1:2:15 0/1:39:25:16:9:30:83.33%:99:2.745E-12:34:5:0:5:31 0/1:39:16:9:7:20:80%:71:7.7086E-8:34:4:1:3:20 0/1:37:32:21:11:39:82.05%:99:1.9666E-15:37:7:4:3:39 0/1:38:21:12:9:25:80.77%:94:3.4262E-10:37:5:1:4:26 0/1:37:35:22:13:43:79.55%:99:1.6883E-16:39:9:3:6:44 0/1:35:23:13:10:25:85.19%:99:1.6161E-11:35:4:1:3:27 0/1:36:26:18:8:35:74.29%:99:6.3192E-12:41:9:5:4:36 0/1:36:16:15:1:19:84.21%:73:4.357E-8:34:3:1:2:20 0/1:37:27:13:14:30:87.1%:99:1.125E-13:33:4:1:3:31 0/1:36:14:10:4:18:73.68%:59:1.2025E-6:34:5:1:4:19 0/1:37:20:10:10:26:76.92%:87:1.8273E-9:35:6:2:4:27 0/1:35:23:16:7:26:85.19%:99:1.6161E-11:34:4:1:3:27 0/1:35:27:22:5:32:81.82%:99:4.5192E-13:39:6:3:3:33 0/1:38:12:7:5:14:85.71%:55:2.9913E-6:36:2:0:2:14 0/1:40:33:22:11:38:86.84%:99:1.3966E-16:34:5:2:3:38 0/1:39:34:17:17:37:89.47%:99:1.6239E-17:36:4:1:3:38 0/1:38:23:15:8:28:82.14%:99:3.103E-11:33:5:2:3:28 0/1:38:12:8:4:18:66.67%:48:1.4831E-5:35:6:2:4:18 0/1:40:16:10:6:23:69.57%:66:2.4726E-7:37:7:1:6:23 0/1:37:12:9:3:15:80%:52:5.2605E-6:33:3:1:2:15 0/1:36:18:11:7:22:81.82%:81:7.1052E-9:34:4:3:1:22 0/1:33:12:6:6:14:85.71%:55:2.9913E-6:34:2:0:2:14 0/1:35:10:5:5:15:62.5%:39:1.2413E-4:35:6:1:5:16 0/1:35:12:7:5:20:57.14%:45:2.658E-5:35:9:5:4:21 0/1:35:6:5:1:11:54.55%:22:6.192E-3:35:5:0:5:11 0/1:34:15:6:9:15:88.24%:71:7.3277E-8:32:2:1:1:17 0/1:37:10:5:5:15:66.67%:40:9.995E-5:33:5:4:1:15 0/1:36:11:8:3:14:78.57%:47:1.6951E-5:37:3:1:2:14 0/1:34:16:8:8:17:84.21%:73:4.357E-8:36:3:0:3:20 0/1:37:10:6:4:12:83.33%:44:3.3652E-5:37:2:0:2:12 0/1:37:17:7:10:20:85%:78:1.2848E-8:36:3:2:1:20 0/1:38:28:15:13:33:84.85%:99:6.9527E-14:42:5:4:1:33 0/1:37:12:8:4:16:75%:50:8.0605E-6:34:4:1:3:16 1/1:34:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:38:21:14:7:27:77.78%:92:5.6888E-10:35:6:2:4:27 1/1:37:22:12:10:21:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:41:16:6:10:17:94.12%:81:7.7134E-9:37:1:1:0:17 1/1:39:15:5:10:16:93.75%:75:2.8282E-8:38:1:0:1:16 0/1:41:26:13:13:30:86.67%:99:3.9214E-13:34:4:2:2:30 1/1:36:22:13:9:23:91.67%:99:1.0078E-11:35:2:2:0:24 0/1:44:8:5:3:9:88.89%:36:2.0568E-4:38:1:0:1:9 0/1:39:20:10:10:23:86.96%:95:3.1579E-10:33:3:2:1:23 0/1:38:25:13:12:29:83.33%:99:2.745E-12:35:5:2:3:30 0/1:39:25:12:13:31:80.65%:99:4.9949E-12:34:6:2:4:31 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 MTB_anc 929094 . C A . PASS AC=189;AF=0.995;AN=190;ANN=A|synonymous_variant|LOW|PE_PGRS14_Rv0834c|gene857|transcript|Transcript_gene857|Coding|1/1|c.1392G>T|p.Ala464Ala|1392/2649|1392/2649|464/882||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.929094C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.929094C>A||||||;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:39:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:15 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:8:6:2:9:88.89%:41:7.77E-5:0:0:0:0:9 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 929748 . T C . PASS AC=284;AF=1.00;AN=284;ANN=C|synonymous_variant|LOW|PE_PGRS14_Rv0834c|gene857|transcript|Transcript_gene857|Coding|1/1|c.738A>G|p.Ala246Ala|738/2649|738/2649|246/882||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.929748T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.929748T>C||||||;HET=0;WT=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:21:20:1:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:13:8:5:14:92.86%:64:3.7391E-7:60:1:1:0:14 1/1:37:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:24:21:3:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:24:21:3:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:22:16:6:23:95.65%:99:2.9149E-12:38:1:1:0:24 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:8:7:1:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:35:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:23:22:1:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:32:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:12:10:2:13:92.31%:64:3.698E-7:0:0:0:0:14 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:18:13:5:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:19:1:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:16 MTB_anc 931123 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|lpqQ_Rv0835|gene858|transcript|Transcript_gene858|Coding|1/1|c.171C>T|p.Tyr57Tyr|171/645|171/645|57/214||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.931123C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.931123C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:63:34:29:63:100%:99:1.657E-37:0:0:0:0:63 1/1:49:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:49:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:51:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:29:14:15:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:52:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:38:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:52 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:51 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:38:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:60:36:24:60:100%:99:1.035E-35:0:0:0:0:61 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:29:14:15:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:22:13:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:43:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 932280 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|stop_gained&splice_region_variant|HIGH|Rv0836c_Rv0836c|gene859|transcript|Transcript_gene859|Coding|1/1|c.653G>A|p.Trp218*|653/654|653/654|218/217||WARNING_TRANSCRIPT_NO_STOP_CODON,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.932280C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.932280C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:51:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:28:14:14:29:96.55%:99:9.9776E-16:38:1:1:0:30 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:49:73:35:38:73:100%:99:1.7006E-43:0:0:0:0:76 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:49:32:17:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:41:21:20:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:51:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:55:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:50:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:43:18:25:44:97.73%:99:1.7144E-24:35:1:0:1:44 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:60:33:27:60:100%:99:1.035E-35:0:0:0:0:62 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:60:37:23:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 933699 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv0837c_Rv0837c|gene860|transcript|Transcript_gene860|Coding|1/1|c.333A>C|p.Gly111Gly|333/1029|333/1029|111/342||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.933699T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.933699T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:51:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:54:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:48:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:47:25:22:48:97.92%:99:7.6145E-27:60:1:1:0:48 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:62:26:36:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:38:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:51 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 934230 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|Rv0837c_Rv0837c-lpqR_Rv0838|gene860-gene861|intergenic_region|gene860-gene861|||n.934230G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:50:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:38:16:22:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:34:15:19:35:97.14%:99:3.2089E-19:60:1:0:1:36 1/1:53:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:43:20:23:45:95.56%:99:1.0412E-23:49:2:1:1:45 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:64:41:23:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:63:31:32:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:52:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:72:34:38:72:100%:99:6.7558E-43:0:0:0:0:73 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:24:9:15:25:96%:99:3.101E-14:0:0:0:0:25 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:38:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:63:36:27:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:60:40:20:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:46:33:13:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 934611 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|Rv0837c_Rv0837c-lpqR_Rv0838|gene860-gene861|intergenic_region|gene860-gene861|||n.934611T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:29:14:15:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:15:14:30:96.67%:99:2.6212E-16:34:1:1:0:30 1/1:43:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:39:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:61:35:26:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:37:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 937485 . C T . PASS AC=18;AF=0.060;AN=300;ANN=T|intergenic_region|MODIFIER|pip_Rv0840c-Rv0841_Rv0841|gene863-gene864|intergenic_region|gene863-gene864|||n.937485C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:57:0%:99:1E0:45:57:29:28:58 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:48:0%:89:1E0:46:48:30:18:51 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:37 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:21 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:40 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:41 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:48 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:25 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:45 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:17:0%:33:1E0:42:17:5:12:19 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:40 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:22 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:49:0%:93:1E0:40:49:29:20:49 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:37 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:16:8:26 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:39 0/0:0:0:0:0:48:0%:89:1E0:45:48:26:22:49 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:42 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:43 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:27 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:35 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:50 0/0:0:0:0:0:54:0%:99:1E0:40:54:33:21:55 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:33 0/0:0:0:0:0:15:0%:29:1E0:44:15:10:5:16 0/0:0:0:0:0:39:0%:74:1E0:39:39:23:16:40 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:40 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:48 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:26 0/0:0:0:0:0:53:0%:99:1E0:40:53:31:22:53 0/0:0:0:0:0:52:0%:96:1E0:40:52:34:18:56 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:42 0/0:0:0:0:0:59:0%:99:1E0:40:59:31:28:61 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:55:25:30:56:98.21%:99:1.4593E-31:60:1:1:0:59 1/1:42:16:13:3:17:94.12%:81:7.7134E-9:60:1:0:1:17 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:19 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:46 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:53:0%:99:1E0:42:53:30:23:55 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:40 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:37 0/0:60:1:1:0:44:2.27%:69:5E-1:41:43:25:18:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:28 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:50:0%:92:1E0:42:50:22:28:53 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:19 0/0:0:0:0:0:31:0%:59:1E0:43:31:21:10:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:51 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:21 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:44 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:30 1/1:37:35:15:20:36:97.22%:99:8.3613E-20:37:1:0:1:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:32 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:21 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:30 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:17 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:30:0%:55:1E0:36:30:8:22:33 0/0:0:0:0:0:32:0%:59:1E0:37:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:30 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:22 0/0:0:0:0:0:54:0%:99:1E0:41:54:26:28:54 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:23 0/0:0:0:0:0:40:0%:74:1E0:37:40:10:30:43 0/0:0:0:0:0:43:0%:82:1E0:38:43:13:30:44 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:45 0/0:0:0:0:0:35:0%:67:1E0:37:35:19:16:36 0/0:0:0:0:0:34:0%:62:1E0:36:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:33 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:44 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:18 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:39:35:13:22:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:34 1/1:35:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:46 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:45 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:41 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:43 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:39 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:45 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:37 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:49 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:41 MTB_anc 938246 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0842_Rv0842|gene865|transcript|Transcript_gene865|Coding|1/1|c.135G>A|p.Leu45Leu|135/1293|135/1293|45/430||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.938246G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.938246G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:50:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:74:40:34:74:100%:99:4.2804E-44:0:0:0:0:75 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:33:16:17:34:97.06%:99:1.2301E-18:36:1:1:0:34 1/1:51:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:52:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 941845 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0845_Rv0845|gene868|transcript|Transcript_gene868|Coding|1/1|c.656A>C|p.Glu219Ala|656/1278|656/1278|219/425||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.941845A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.941845A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:44:33:11:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:60:27:33:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:27:14:13:28:96.43%:99:3.7915E-15:39:1:0:1:30 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:33:17:16:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:52:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:37:8:29:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:69:35:34:69:100%:99:4.233E-41:0:0:0:0:69 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:48:24:24:49:97.96%:99:1.9625E-27:60:1:0:1:49 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:28:23:5:29:96.55%:99:9.9776E-16:27:1:1:0:29 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:22:12:10:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:51:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:48:33:15:48:100%:99:1.554E-28:0:0:0:0:52 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:38:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:59 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:40:24:16:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 MTB_anc 948294 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0851c_Rv0851c|gene873|transcript|Transcript_gene873|Coding|1/1|c.175G>A|p.Gly59Ser|175/828|175/828|59/275||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.948294C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.948294C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:38:34:4:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:38:29:9:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:43:31:12:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:34:30:4:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:26:19:7:27:96.3%:99:1.4382E-14:34:1:1:0:27 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:54:36:18:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:30:25:5:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:59:42:17:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:39:47:38:9:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:54:37:17:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:39:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:40:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:38:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:31:26:5:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:56:39:17:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:25:3:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:43:36:7:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:33:26:7:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:49:34:15:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:53:38:15:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:24:22:2:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:39:30:9:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:44:37:7:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:63:41:22:63:100%:99:1.657E-37:0:0:0:0:64 1/1:40:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:53:41:12:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:32:27:5:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:38:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:40:31:9:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:37:30:7:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:52:36:16:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:33:26:7:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:59:47:12:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:38:31:7:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:32:28:4:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:35:28:7:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:54:42:12:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 948910 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv0852_Rv0852|gene874|transcript|Transcript_gene874|Coding|1/1|c.154G>A|p.Gly52Ser|154/639|154/639|52/212||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.948910G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.948910G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:40:46:30:16:46 0/0:35:1:1:0:22:4.55%:31:5E-1:49:21:11:10:22 0/0:0:0:0:0:54:0%:99:1E0:47:54:34:20:56 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:23 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:22 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:28 0/0:0:0:0:0:35:0%:67:1E0:52:35:15:20:35 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:32:0%:59:1E0:51:32:13:19:32 0/0:0:0:0:0:50:0%:92:1E0:47:50:28:22:50 0/0:0:0:0:0:42:0%:77:1E0:50:42:22:20:43 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:43 0/0:0:0:0:0:26:0%:47:1E0:53:26:16:10:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:25:16:42 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:17 0/0:0:0:0:0:43:0%:82:1E0:48:43:27:16:44 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:15:0%:29:1E0:42:15:8:7:15 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:33:0%:63:1E0:52:33:16:17:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:66:0%:99:1E0:43:66:40:26:66 0/0:0:0:0:0:34:0%:62:1E0:53:34:18:16:34 0/0:30:1:0:1:35:2.94%:51:5E-1:46:33:17:16:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:38:1:0:1:27:3.7%:41:5E-1:50:26:18:8:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:52:31:12:19:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:41 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:44 0/0:0:0:0:0:55:0%:99:1E0:49:55:21:34:57 0/0:0:0:0:0:35:0%:67:1E0:49:35:20:15:36 0/0:0:0:0:0:60:0%:99:1E0:47:60:35:25:60 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:24:14:39 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:21 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:46:0%:85:1E0:49:46:28:18:48 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:46 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:49 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:42:0%:77:1E0:47:42:14:28:42 0/0:0:0:0:0:60:0%:99:1E0:45:60:30:30:60 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:50:22:14:8:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:19 0/0:0:0:0:0:26:0%:47:1E0:49:26:9:17:28 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:19:0%:37:1E0:53:19:10:9:19 0/0:45:1:0:1:43:2.33%:70:5E-1:52:42:18:24:45 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:23:11:34 0/0:0:0:0:0:33:0%:63:1E0:49:33:18:15:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:8:16:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:53:22:11:11:22 0/0:0:0:0:0:44:0%:81:1E0:47:44:22:22:44 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:23:0%:44:1E0:50:23:10:13:23 0/0:0:0:0:0:62:0%:99:1E0:42:62:37:25:62 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:32 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:50 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:45:0%:85:1E0:42:45:32:13:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:38 0/0:0:0:0:0:31:0%:59:1E0:41:31:22:9:33 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:17 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:40 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:36 0/0:0:0:0:0:49:0%:93:1E0:39:49:21:28:49 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:35 0/0:0:0:0:0:65:0%:99:1E0:41:65:42:23:65 0/0:0:0:0:0:57:0%:99:1E0:44:57:32:25:57 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:51:0%:97:1E0:40:51:23:28:53 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:45 0/0:0:0:0:0:50:0%:92:1E0:42:50:30:20:50 0/0:0:0:0:0:49:0%:93:1E0:39:49:24:25:50 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:49 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:57 0/0:0:0:0:0:51:0%:97:1E0:42:51:29:22:52 0/0:39:1:1:0:36:2.78%:55:5E-1:40:35:21:14:38 0/0:0:0:0:0:57:0%:99:1E0:42:57:30:27:58 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:34 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:47 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:48 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:42 0/0:0:0:0:0:42:0%:77:1E0:40:42:25:17:43 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:53:0%:99:1E0:47:53:31:22:54 0/0:0:0:0:0:44:0%:81:1E0:43:44:28:16:45 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:54 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:42 MTB_anc 951142 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|pdc_Rv0853c-Rv0854_Rv0854|gene875-gene876|intergenic_region|gene875-gene876|||n.951142A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:51:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:53:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:70:39:31:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:17:7:10:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:25:9:16:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:52:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:40:21:19:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:38:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:38:14:24:39:97.44%:99:1.4697E-21:37:1:0:1:42 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 953233 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|Rv0856_Rv0856-Rv0857_Rv0857|gene878-gene879|intergenic_region|gene878-gene879|||n.953233T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:48:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:49:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:14:13:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:66:38:28:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:48:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:51:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:50:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:43:21:22:44:97.73%:99:1.7144E-24:39:1:1:0:47 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:61:27:34:61:100%:99:2.609E-36:0:0:0:0:61 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:51 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:62:37:25:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:48:22:26:49:97.96%:99:1.9625E-27:60:1:1:0:49 1/1:41:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 954136 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|dapC_Rv0858c|gene880|transcript|Transcript_gene880|Coding|1/1|c.785G>A|p.Ser262Asn|785/1194|785/1194|262/397||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.954136C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.954136C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:46:20:26:47:97.87%:99:2.9526E-26:39:1:1:0:47 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:14:13:28:96.43%:99:3.7915E-15:60:1:1:0:29 1/1:40:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:54:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:13:22:36:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:26:13:13:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:60:23:37:61:98.36%:99:1.6176E-34:50:1:1:0:61 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:49:22:27:49:100%:99:3.925E-29:0:0:0:0:53 1/1:41:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:38:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:14:16:31:96.77%:99:6.8754E-17:37:1:0:1:31 1/1:38:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:39:19:20:40:97.5%:99:3.8137E-22:36:1:0:1:40 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 954864 . CGCGG C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|frameshift_variant|HIGH|dapC_Rv0858c|gene880|transcript|Transcript_gene880|Coding|1/1|c.53_56delCCGC|p.Ser18fs|56/1194|53/1194|18/397||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.954865_954868delGCGG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.954865_954868delGCGG||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:45 0/0:0:0:0:0:11:0%:22:1E0:53:11:4:7:11 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:16:0%:29:1E0:50:16:11:5:17 0/0:0:0:0:0:40:0%:74:1E0:41:40:26:14:42 0/0:0:0:0:0:9:0%:18:1E0:48:9:3:6:9 0/0:0:0:0:0:55:0%:99:1E0:45:55:29:26:56 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 0/0:0:0:0:0:55:0%:99:1E0:43:55:36:19:56 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:24 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:27 0/0:0:0:0:0:19:0%:37:1E0:50:19:13:6:19 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:20:0%:36:1E0:40:20:14:6:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:38:0%:70:1E0:46:38:24:14:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:36 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:48 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:42 0/0:0:0:0:0:45:0%:85:1E0:47:45:21:24:48 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:43 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:42 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:21 0/0:0:0:0:0:18:0%:32:1E0:44:18:6:12:19 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:47 0/0:0:0:0:0:33:0%:63:1E0:50:33:12:21:33 0/0:0:0:0:0:14:0%:25:1E0:52:14:4:10:16 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:43 0/0:0:0:0:0:20:0%:36:1E0:48:20:14:6:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:49:0%:93:1E0:40:49:23:26:49 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:46 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:37 0/0:0:0:0:0:45:0%:85:1E0:46:45:31:14:46 0/0:39:1:0:1:28:3.57%:41:5E-1:42:27:13:14:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:51 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:47:0%:89:1E0:47:47:24:23:48 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:16:0%:29:1E0:51:16:9:7:16 0/0:0:0:0:0:23:0%:44:1E0:49:23:9:14:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:50 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:25 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:8:17:25 0/0:0:0:0:0:14:0%:25:1E0:52:14:6:8:16 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:32:0%:59:1E0:48:32:20:12:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:41 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:16 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:21 0/0:0:0:0:0:15:0%:29:1E0:44:15:10:5:16 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:28:10:38 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:29 0/0:0:0:0:0:21:0%:40:1E0:41:21:16:5:21 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:17:23:41 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:58:0%:99:1E0:44:58:34:24:59 0/0:0:0:0:0:49:0%:93:1E0:41:49:25:24:50 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 1/1:36:18:11:7:17:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:34 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:31 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:42 0/0:0:0:0:0:33:0%:63:1E0:39:33:22:11:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:36 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:44:0%:81:1E0:40:44:27:17:45 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:23 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:48:0%:89:1E0:38:48:23:25:49 0/0:39:1:1:0:41:2.44%:66:5E-1:42:40:20:20:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:38 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:47 0/0:0:0:0:0:32:0%:59:1E0:37:32:21:11:33 MTB_anc 959041 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|ercc3_Rv0861c|gene883|transcript|Transcript_gene883|Coding|1/1|c.1111T>C|p.Tyr371His|1111/1629|1111/1629|371/542||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.959041A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.959041A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:44 0/0:0:0:0:0:16:0%:29:1E0:48:16:10:6:17 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:48 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:32 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:22 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:35 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:17 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:24 0/0:0:0:0:0:17:0%:33:1E0:44:17:6:11:18 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:27 0/0:0:0:0:0:46:0%:85:1E0:46:46:20:26:46 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:21 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:42 0/0:0:0:0:0:61:0%:99:1E0:47:61:32:29:64 0/0:47:1:1:0:46:2.17%:73:5E-1:43:45:24:21:46 0/0:0:0:0:0:41:0%:78:1E0:45:41:13:28:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:44 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:35 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:33 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:45 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:16 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:22 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:19 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:21 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:0:0:0:0:18:0%:32:1E0:40:18:14:4:19 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:39 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:48 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:60:0%:99:1E0:42:60:34:26:64 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:34 0/0:0:0:0:0:17:0%:33:1E0:50:17:4:13:17 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:16:4:21 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:38 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:20:9:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:23:11:34 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:20:7:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:26 0/0:0:0:0:0:19:0%:37:1E0:39:19:14:5:19 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:35 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:41 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:25 0/0:0:0:0:0:41:0%:78:1E0:38:41:22:19:44 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:26 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:48 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:29 1/1:36:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:34 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:28 0/0:0:0:0:0:32:0%:59:1E0:36:32:18:14:37 0/0:0:0:0:0:17:0%:33:1E0:41:17:9:8:19 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:33 0/0:0:0:0:0:42:0%:77:1E0:42:42:16:26:42 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:39 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:45 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:22 0/0:0:0:0:0:51:0%:97:1E0:40:51:32:19:52 0/0:0:0:0:0:61:0%:99:1E0:42:61:32:29:63 0/0:0:0:0:0:15:0%:29:1E0:41:15:9:6:17 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:28 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:49 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:48 0/0:0:0:0:0:42:0%:77:1E0:38:42:14:28:46 0/0:0:0:0:0:43:0%:82:1E0:37:43:21:22:43 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:39 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 0/0:0:0:0:0:24:0%:44:1E0:36:24:17:7:29 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:35 0/0:0:0:0:0:40:0%:74:1E0:38:40:21:19:41 0/0:0:0:0:0:38:0%:70:1E0:37:38:18:20:42 0/0:0:0:0:0:35:0%:67:1E0:36:35:21:14:42 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:29 0/0:0:0:0:0:62:0%:99:1E0:37:62:29:33:64 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:37 0/0:0:0:0:0:44:0%:81:1E0:40:44:28:16:46 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:19 0/0:0:0:0:0:35:0%:67:1E0:37:35:16:19:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:40:0%:74:1E0:39:40:28:12:42 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:48 0/0:0:0:0:0:52:0%:96:1E0:38:52:22:30:55 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:41 MTB_anc 960367 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0862c_Rv0862c|gene884|transcript|Transcript_gene884|Coding|1/1|c.2246C>T|p.Ser749Leu|2246/2271|2246/2271|749/756||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.960367G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.960367G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:30:12:18:31:96.77%:99:6.8754E-17:38:1:0:1:32 1/1:43:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:58:16:42:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:38:15:23:39:97.44%:99:1.4697E-21:32:1:0:1:39 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:56:19:37:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:44:11:33:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:37:41:9:32:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:38:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:49:18:31:49:100%:99:3.925E-29:0:0:0:0:53 1/1:37:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 963562 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|mog_Rv0865|gene887|transcript|Transcript_gene887|Coding|1/1|c.173C>T|p.Ala58Val|173/483|173/483|58/160||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.963562C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.963562C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:31 0/0:0:0:0:0:15:0%:29:1E0:51:15:8:7:15 0/0:0:0:0:0:50:0%:92:1E0:45:50:24:26:51 0/0:0:0:0:0:17:0%:33:1E0:42:17:15:2:17 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:18:7:25 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:17 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:6:15:22 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:24:0%:44:1E0:46:24:6:18:24 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:46 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:34 0/0:0:0:0:0:22:0%:40:1E0:45:22:15:7:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:15:0%:29:1E0:47:15:7:8:16 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:36:1:1:0:28:3.57%:41:5E-1:41:27:18:9:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:60:1:0:1:29:3.45%:45:5E-1:41:28:16:12:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:39 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:46 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:51:0%:97:1E0:42:51:31:20:51 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:41 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:47 0/0:0:0:0:0:12:0%:21:1E0:45:12:5:7:12 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:34 0/0:60:1:0:1:36:2.78%:55:5E-1:45:35:21:14:36 0/0:0:0:0:0:17:0%:33:1E0:46:17:15:2:17 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:46 0/0:0:0:0:0:16:0%:29:1E0:51:16:9:7:17 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:49 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:38:1:1:0:32:3.12%:48:5E-1:46:31:19:12:32 0/0:0:0:0:0:53:0%:99:1E0:46:53:27:26:54 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 0/0:0:0:0:0:28:0%:51:1E0:50:28:16:12:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:27:0%:52:1E0:48:27:18:9:27 0/0:0:0:0:0:14:0%:25:1E0:51:14:10:4:14 0/0:60:1:0:1:27:3.7%:41:5E-1:50:26:15:11:27 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:40 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:19 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:39 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:43 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:25 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:42:0%:77:1E0:38:42:21:21:44 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:38:1:0:1:57:1.75%:95:5E-1:40:56:32:24:57 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:43 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:38 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:44 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:38:0%:70:1E0:40:38:25:13:39 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:39 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:22 0/0:0:0:0:0:43:0%:82:1E0:40:43:27:16:43 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:25:15:41 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:37 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:42 0/0:0:0:0:0:58:0%:99:1E0:39:58:29:29:58 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:28 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 0/0:0:0:0:0:46:0%:85:1E0:39:46:16:30:49 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:28 0/0:0:0:0:0:55:0%:99:1E0:38:55:38:17:56 0/0:0:0:0:0:32:0%:59:1E0:36:32:14:18:35 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:41 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:46 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:41 0/0:0:0:0:0:39:0%:74:1E0:39:39:25:14:41 0/0:0:0:0:0:56:0%:99:1E0:40:56:36:20:56 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:35 0/0:0:0:0:0:48:0%:89:1E0:38:48:20:28:49 0/0:0:0:0:0:37:0%:70:1E0:37:37:18:19:38 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:50 0/0:0:0:0:0:30:0%:55:1E0:43:30:23:7:32 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:44 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:56:0%:99:1E0:41:56:27:29:56 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:41 MTB_anc 965608 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|intergenic_region|MODIFIER|rpfA_Rv0867c-moaD2_Rv0868c|gene889-gene890|intergenic_region|gene889-gene890|||n.965608G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:40 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:17 0/0:0:0:0:0:57:0%:99:1E0:45:57:27:30:57 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:15:0%:29:1E0:40:15:4:11:15 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:39 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:18:0%:32:1E0:49:18:10:8:18 0/0:60:1:1:0:42:2.38%:66:5E-1:43:41:22:19:45 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:27 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:17 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:60:1:1:0:21:4.76%:31:5E-1:44:20:13:7:21 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:34 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:74:0%:99:1E0:45:74:38:36:74 0/0:0:0:0:0:54:0%:99:1E0:44:54:31:23:54 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:49 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:37 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:50:0%:92:1E0:41:50:21:29:50 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:16:0%:29:1E0:50:16:6:10:16 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:23 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:21 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:9:19:29 0/0:39:1:1:0:42:2.38%:66:5E-1:45:41:22:19:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:22:8:31 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:40 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:59:0%:99:1E0:43:59:30:29:60 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:17 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:41 0/0:0:0:0:0:36:0%:66:1E0:49:36:19:17:36 0/0:0:0:0:0:14:0%:25:1E0:44:14:3:11:14 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:35 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:25 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:37:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:35:0%:67:1E0:38:35:22:13:35 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:47 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:37:0%:70:1E0:39:37:24:13:37 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:23 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:36 0/0:0:0:0:0:31:0%:59:1E0:37:31:24:7:32 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/1:43:8:6:2:34:23.53%:26:2.4562E-3:44:26:14:12:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:27:13:41 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:33 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:29 0/0:0:0:0:0:64:0%:99:1E0:40:64:41:23:64 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:52 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:23 0/0:0:0:0:0:50:0%:92:1E0:38:50:31:19:51 0/0:20:1:0:1:30:3.33%:44:5E-1:41:29:18:11:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:34:0%:62:1E0:37:34:20:14:36 0/0:0:0:0:0:36:0%:66:1E0:38:36:24:12:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:35 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:39 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:40 0/0:0:0:0:0:38:0%:70:1E0:40:38:25:13:39 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:39 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:42 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:55:0%:99:1E0:37:55:33:22:55 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:44 0/0:0:0:0:0:35:0%:67:1E0:39:35:24:11:35 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:37 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:28:15:43 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:44 0/0:30:1:1:0:26:3.85%:38:5E-1:42:25:14:11:27 0/0:0:0:0:0:38:0%:70:1E0:39:38:24:14:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:33 0/0:0:0:0:0:51:0%:97:1E0:40:51:31:20:52 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:29 MTB_anc 968426 . A AGCCGGGTTG . PASS AC=155;AF=0.520;AN=298;ANN=AGCCGGGTTG|inframe_insertion|MODERATE|PE_PGRS15_Rv0872c|gene894|transcript|Transcript_gene894|Coding|1/1|c.1810_1818dupCAACCCGGC|p.Gly606_Ter607insGlnProGly|1818/1821|1818/1821|606/606||,AGCCGGGTTG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.968426_968427insGCCGGGTTG||||||,AGCCGGGTTG|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.968426_968427insGCCGGGTTG||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:31:25:6:37:79.49%:99:1.1554E-14:40:8:4:4:39 0/1:42:10:5:5:12:83.33%:44:3.3652E-5:46:2:0:2:12 0/1:38:24:13:11:35:66.67%:99:6.1763E-11:44:9:5:4:36 0/1:45:11:6:5:16:68.75%:44:3.3854E-5:41:5:4:1:16 0/1:38:24:21:3:31:77.42%:99:2.7115E-11:42:7:4:3:31 0/1:40:16:9:7:20:80%:71:7.7086E-8:47:4:2:2:20 0/1:38:8:5:3:15:50%:29:1.0995E-3:39:7:5:2:16 0/1:41:13:7:6:19:68.42%:53:5.0106E-6:44:6:3:3:19 0/1:42:16:10:6:23:69.57%:67:1.7905E-7:47:6:3:3:23 0/1:51:12:6:6:16:75%:50:8.0605E-6:47:4:1:3:17 0/1:42:11:8:3:16:68.75%:44:3.3854E-5:41:5:4:1:16 0/1:39:34:27:7:42:79.07%:99:5.5428E-16:35:9:7:2:44 1/1:39:16:12:4:17:94.12%:81:7.7134E-9:60:1:0:1:17 0/1:41:30:18:12:38:78.95%:99:3.7857E-14:37:8:6:2:38 0/1:40:25:19:6:30:83.33%:99:2.745E-12:37:5:3:2:30 0/1:39:21:14:7:26:80.77%:94:3.4262E-10:44:5:4:1:26 0/1:38:12:8:4:19:60%:46:2.2548E-5:39:8:5:3:20 0/1:34:7:5:2:9:70%:28:1.548E-3:37:3:2:1:12 0/1:37:6:4:2:7:85.71%:26:2.331E-3:34:1:0:1:7 0/1:44:9:5:4:11:81.82%:39:1.1057E-4:35:2:2:0:11 0/1:38:22:15:7:28:73.33%:95:2.7763E-10:39:7:6:1:30 0/1:39:29:21:8:36:80.56%:99:4.008E-14:37:6:4:2:36 0/1:37:13:10:3:16:81.25%:57:1.6121E-6:42:3:2:1:16 0/1:42:15:9:6:24:62.5%:59:1.196E-6:38:9:7:2:24 0/1:38:17:12:5:22:77.27%:74:3.8368E-8:37:5:2:3:22 0/1:42:17:12:5:21:80.95%:76:2.3502E-8:42:4:1:3:21 0/1:44:13:6:7:17:76.47%:55:2.5647E-6:43:4:3:1:17 1/1:43:24:15:9:25:96%:99:2.0568E-13:38:1:0:1:25 0/1:44:16:12:4:24:66.67%:66:2.4726E-7:34:7:4:3:24 0/1:41:31:16:15:37:83.78%:99:3.4914E-15:37:6:4:2:37 0/1:39:21:11:10:28:75%:90:8.7917E-10:38:7:5:2:29 0/1:41:19:11:8:23:82.61%:86:2.1316E-9:34:4:2:2:24 0/1:51:10:6:4:14:71.43%:41:7.6278E-5:40:4:2:2:14 0/1:37:15:9:6:22:68.18%:61:7.4178E-7:39:7:3:4:22 1/1:45:21:15:6:23:91.3%:99:3.6437E-11:33:2:1:1:23 0/1:40:28:17:11:36:77.78%:99:2.4048E-13:36:7:4:3:36 0/1:40:29:17:12:37:78.38%:99:1.2345E-13:38:8:5:3:37 0/1:42:25:15:10:28:89.29%:99:5.8768E-13:34:3:1:2:29 0/1:43:23:17:6:26:85.19%:99:1.6161E-11:48:4:2:2:27 0/1:37:25:19:6:27:86.21%:99:1.3609E-12:38:4:1:3:29 0/1:38:20:11:9:25:80%:89:1.1273E-9:37:5:2:3:26 0/1:39:22:18:4:25:88%:99:2.5916E-11:36:3:2:1:25 0/1:39:19:11:8:27:67.86%:77:1.6265E-8:38:9:5:4:28 0/1:38:14:8:6:19:70%:57:1.6702E-6:37:6:3:3:20 0/1:41:39:28:11:44:88.64%:99:7.2647E-20:41:5:2:3:44 0/1:40:37:31:6:43:86.05%:99:9.1365E-19:40:5:2:3:43 0/1:41:14:11:3:19:73.68%:59:1.2025E-6:45:5:4:1:19 0/1:40:25:13:12:29:86.21%:99:1.3609E-12:41:4:3:1:29 0/1:41:22:15:7:28:75.86%:97:1.7583E-10:34:6:2:4:29 0/1:40:23:16:7:26:88.46%:99:7.3681E-12:44:3:3:0:26 0/0:38:4:3:1:10:40%:3:4.3344E-2:47:6:5:1:10 0/1:41:38:32:6:43:88.37%:99:2.5797E-19:36:5:3:2:43 0/1:41:13:9:4:17:76.47%:55:2.5647E-6:42:4:1:3:17 0/1:37:20:18:2:26:74.07%:85:2.7631E-9:41:7:6:1:28 1/1:38:20:15:5:22:90.91%:98:1.3117E-10:36:2:1:1:22 0/1:40:30:19:11:36:81.08%:99:2.1946E-14:36:7:5:2:37 0/1:38:17:11:6:21:80.95%:76:2.3502E-8:37:4:3:1:21 1/1:41:14:10:4:15:93.33%:69:1.0315E-7:37:1:1:0:15 0/1:38:25:17:8:35:71.43%:99:2.8437E-11:35:10:7:3:35 0/1:39:23:19:4:26:85.19%:99:1.6161E-11:36:4:2:2:27 0/1:41:19:14:5:26:73.08%:80:8.6144E-9:35:7:3:4:26 0/1:38:28:14:14:34:80%:99:2.4048E-13:40:7:6:1:35 0/1:39:15:12:3:22:68.18%:61:7.4178E-7:42:7:3:4:22 0/1:43:19:10:9:26:73.08%:80:8.6144E-9:39:7:3:4:27 0/1:38:22:13:9:28:78.57%:97:1.7583E-10:34:6:3:3:28 0/1:42:31:19:12:36:86.11%:99:1.6935E-15:46:5:4:1:36 0/1:41:19:13:6:25:76%:82:5.8245E-9:37:6:4:2:25 0/1:45:22:14:8:30:73.33%:97:1.7583E-10:37:6:5:1:30 0/1:41:12:8:4:14:85.71%:55:2.9913E-6:34:2:0:2:14 0/0:48:2:1:1:9:22.22%:5:2.3333E-1:42:6:5:1:9 0/1:40:17:11:6:23:73.91%:72:5.7694E-8:36:6:5:1:23 0/1:41:24:14:10:26:88.89%:99:2.0853E-12:52:3:2:1:27 0/1:41:11:9:2:14:78.57%:47:1.6951E-5:43:3:2:1:14 0/1:40:10:7:3:14:71.43%:42:5.3843E-5:52:3:1:2:14 0/1:38:30:24:6:39:75%:99:6.162E-14:34:9:7:2:40 0/1:45:17:12:5:23:73.91%:72:5.7694E-8:41:6:6:0:24 0/1:39:20:16:4:24:80%:91:6.3493E-10:43:4:3:1:25 0/1:37:23:14:9:27:76.67%:99:8.7055E-11:36:7:3:4:30 0/1:39:19:14:5:26:70.37%:79:1.2089E-8:40:8:2:6:27 0/1:41:20:17:3:24:83.33%:91:6.3493E-10:35:4:1:3:24 0/1:41:24:16:8:27:88.89%:99:2.0853E-12:44:3:3:0:27 0/1:37:28:13:15:39:71.79%:99:1.3724E-12:37:11:8:3:39 0/1:39:17:9:8:23:73.91%:72:5.7694E-8:41:6:3:3:23 0/1:40:14:8:6:17:82.35%:63:4.8851E-7:37:3:2:1:18 0/1:38:22:10:12:29:75.86%:95:2.7763E-10:38:7:6:1:29 0/1:42:21:14:7:26:80.77%:94:3.4262E-10:36:5:3:2:26 0/1:42:21:15:6:24:87.5%:99:9.0704E-11:43:3:3:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:42:21:13:8:25:84%:97:1.8789E-10:35:4:2:2:27 1/1:44:14:9:5:15:93.33%:69:1.0315E-7:37:1:1:0:15 0/1:38:18:13:5:25:72%:75:2.6626E-8:36:7:1:6:25 0/1:42:20:10:10:25:80%:89:1.1273E-9:42:5:4:1:25 0/1:38:34:25:9:38:89.47%:99:1.6239E-17:37:4:4:0:38 0/1:42:29:18:11:33:87.88%:99:9.1482E-15:36:4:4:0:33 0/1:38:35:22:13:45:77.78%:99:2.817E-16:36:10:4:6:45 0/1:37:15:12:3:24:62.5%:61:7.4178E-7:38:7:4:3:24 0/1:38:22:19:3:27:78.57%:97:1.7583E-10:35:6:5:1:28 0/1:42:16:14:2:25:64%:63:4.1493E-7:38:9:8:1:25 0/1:37:24:13:11:30:77.42%:99:2.7115E-11:43:7:5:2:31 0/1:39:24:21:3:33:72.73%:99:6.1763E-11:39:9:6:3:33 0/1:40:16:13:3:19:84.21%:73:4.357E-8:34:3:2:1:19 0/1:41:21:12:9:27:77.78%:92:5.6888E-10:40:6:4:2:27 0/1:38:24:19:5:27:88.89%:99:2.0853E-12:36:3:3:0:27 0/1:37:17:15:2:24:70.83%:70:8.1543E-8:36:7:5:2:24 0/1:39:12:11:1:15:80%:55:2.9913E-6:33:2:0:2:15 0/1:41:21:17:4:26:80.77%:94:3.4262E-10:37:5:3:2:26 0/1:40:25:17:8:29:86.21%:99:1.3609E-12:36:4:3:1:29 0/1:43:20:11:9:29:68.97%:84:3.9563E-9:35:8:6:2:30 0/1:40:26:17:9:32:81.25%:99:1.5064E-12:37:6:4:2:32 0/1:41:41:28:13:48:83.67%:99:1.4122E-20:36:6:3:3:49 0/1:41:16:10:6:19:80%:71:7.7086E-8:34:4:3:1:20 1/1:38:28:17:11:30:90.32%:99:1.2857E-14:36:3:3:0:31 0/1:37:13:6:7:20:65%:53:5.0106E-6:38:6:2:4:21 0/1:37:11:8:3:14:78.57%:47:1.6951E-5:36:3:2:1:14 0/1:39:19:13:6:22:86.36%:89:1.0931E-9:34:3:0:3:23 0/1:38:26:21:5:36:72.22%:99:9.2118E-12:36:10:7:3:37 0/1:36:20:15:5:26:76.92%:87:1.8273E-9:34:6:4:2:26 1/1:38:38:26:12:40:92.68%:99:3.1178E-20:35:3:2:1:43 0/1:37:15:12:3:20:71.43%:62:5.4994E-7:36:6:3:3:21 0/1:39:29:18:11:34:85.29%:99:2.0235E-14:35:5:1:4:34 0/1:40:29:25:4:35:82.86%:99:4.008E-14:41:6:5:1:35 0/1:38:22:18:4:26:84.62%:99:5.5261E-11:35:4:1:3:26 0/1:41:23:18:5:29:79.31%:99:5.3984E-11:34:6:2:4:29 0/1:34:24:18:6:24:88.89%:99:2.0853E-12:36:3:1:2:27 0/1:38:19:13:6:21:86.36%:89:1.0931E-9:38:3:1:2:22 0/1:40:23:19:4:29:76.67%:99:8.7055E-11:35:7:3:4:31 0/1:40:18:13:5:28:64.29%:72:6.1806E-8:37:10:4:6:29 0/1:37:20:14:6:26:76.92%:87:1.8273E-9:45:6:3:3:26 0/1:42:19:13:6:28:67.86%:77:1.6265E-8:36:9:5:4:28 0/1:39:18:12:6:22:75%:77:1.8413E-8:35:6:4:2:24 0/1:37:18:14:4:23:78.26%:79:1.1937E-8:35:5:4:1:24 0/1:40:14:11:3:21:66.67%:56:2.1998E-6:35:7:4:3:22 0/1:37:18:15:3:22:81.82%:81:7.1052E-9:36:4:0:4:22 0/1:39:18:11:7:29:62.07%:71:7.6888E-8:36:11:5:6:29 0/1:39:14:11:3:18:77.78%:60:8.0605E-7:37:4:2:2:19 0/1:36:13:10:3:18:68.42%:54:3.7078E-6:41:5:5:0:19 0/1:38:29:25:4:42:69.05%:99:8.6436E-13:36:13:6:7:42 0/1:45:17:13:4:26:65.38%:68:1.4238E-7:39:9:6:3:26 0/1:38:25:13:12:27:89.29%:99:5.8768E-13:37:3:3:0:28 0/1:39:19:13:6:30:63.33%:76:2.1144E-8:37:10:5:5:30 0/1:39:24:17:7:29:82.76%:99:9.2544E-12:37:5:4:1:29 0/1:37:16:9:7:19:80%:71:7.7086E-8:37:4:3:1:20 0/1:39:9:6:3:17:52.94%:33:4.6348E-4:35:8:5:3:17 0/1:42:23:12:11:26:88.46%:99:7.3681E-12:36:3:2:1:26 0/1:38:25:12:13:33:73.53%:99:1.9819E-11:35:9:4:5:34 0/1:42:18:10:8:27:66.67%:73:4.8354E-8:36:9:6:3:27 0/1:40:10:8:2:12:83.33%:44:3.3652E-5:37:2:2:0:12 0/1:41:25:13:12:30:83.33%:99:2.745E-12:37:5:4:1:30 0/1:38:30:19:11:39:76.92%:99:3.7857E-14:37:8:4:4:39 0/1:39:18:13:5:23:78.26%:79:1.1937E-8:34:5:4:1:23 MTB_anc 976889 . C CT . PASS AC=49;AF=0.163;AN=300;ANN=CT|frameshift_variant|HIGH|PPE13_Rv0878c|gene900|transcript|Transcript_gene900|Coding|1/1|c.1314dupA|p.Val439fs|1314/1332|1314/1332|438/443||,CT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.976889_976890insT||||||,CT|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.976889_976890insT||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:47 0/0:0:0:0:0:15:0%:29:1E0:50:15:9:6:15 0/0:0:0:0:0:45:0%:85:1E0:38:45:37:8:47 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/1:45:22:15:7:25:81.48%:99:1.0343E-10:44:5:1:4:27 1/1:47:13:6:7:14:92.86%:64:3.7391E-7:34:1:0:1:14 0/0:0:0:0:0:43:0%:82:1E0:47:43:19:24:45 0/0:0:0:0:0:13:0%:25:1E0:37:13:13:0:13 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:39:1:0:1:21:4.76%:31:5E-1:50:20:9:11:21 1/1:43:28:12:16:28:90.32%:99:1.2857E-14:34:3:1:2:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:21 0/0:37:1:0:1:38:2.63%:58:5E-1:44:37:18:19:40 0/0:0:0:0:0:11:0%:22:1E0:40:11:10:1:12 0/0:0:0:0:0:23:0%:44:1E0:40:23:21:2:23 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:20 0/1:41:16:8:8:17:88.89%:76:2.0936E-8:35:2:1:1:18 0/0:0:0:0:0:9:0%:18:1E0:40:9:9:0:9 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:16 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:0:0:0:0:55:0%:99:1E0:47:55:34:21:55 0/0:0:0:0:0:28:0%:51:1E0:41:28:8:20:28 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:60:1:0:1:28:3.57%:41:5E-1:41:27:14:13:28 0/1:46:14:6:8:27:51.85%:52:6.1806E-6:39:13:8:5:27 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:30 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:22 0/0:60:1:0:1:25:4%:38:5E-1:38:24:23:1:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:26 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:49:0%:93:1E0:47:49:32:17:49 0/0:42:3:0:3:37:8.11%:43:1.1986E-1:48:34:20:14:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:41 0/0:0:0:0:0:9:0%:18:1E0:40:9:8:1:9 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:41 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:13:0%:25:1E0:51:13:6:7:15 0/1:45:25:13:12:29:86.21%:99:5.8768E-13:43:3:1:2:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:16:0%:29:1E0:37:16:15:1:16 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:22 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:14:0%:25:1E0:52:14:8:6:14 0/1:39:17:8:9:26:62.96%:67:1.7891E-7:36:10:6:4:27 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:20:0%:36:1E0:43:20:3:17:20 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:11:0%:22:1E0:37:11:11:0:11 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:42 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:33 0/0:47:5:3:2:17:29.41%:6:2.1691E-2:47:11:7:4:18 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:26 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/1:47:25:14:11:28:89.29%:99:5.8768E-13:45:3:1:2:28 0/1:42:26:12:14:28:86.67%:99:1.6496E-13:40:3:2:1:30 0/1:48:43:18:25:53:81.13%:99:5.5491E-21:39:8:5:3:53 1/1:46:34:15:19:35:94.44%:99:1.5887E-18:31:2:1:1:36 1/1:46:27:14:13:28:96.43%:99:3.7915E-15:60:1:1:0:28 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:22 0/0:37:1:0:1:24:4.17%:34:5E-1:44:23:13:10:25 0/0:60:1:0:1:32:3.12%:48:5E-1:46:31:18:13:33 1/1:47:25:17:8:27:92.59%:99:2.0853E-13:34:2:1:1:27 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:32 0/1:50:27:15:12:31:87.1%:99:1.125E-13:37:4:1:3:31 0/0:37:2:1:1:28:7.14%:34:2.4545E-1:39:26:12:14:28 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:17 0/0:0:0:0:0:28:0%:51:1E0:46:28:19:9:30 0/0:0:0:0:0:15:0%:29:1E0:38:15:13:2:15 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:29 0/0:36:3:1:2:28:10.34%:28:1.1818E-1:40:25:19:6:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:60:1:0:1:21:4.76%:31:5E-1:39:20:17:3:22 0/1:41:22:7:15:26:84.62%:99:5.5261E-11:41:4:2:2:26 0/0:0:0:0:0:11:0%:22:1E0:37:11:10:1:11 0/0:0:0:0:0:17:0%:33:1E0:37:17:14:3:18 0/0:0:0:0:0:18:0%:32:1E0:45:18:4:14:19 0/0:0:0:0:0:30:0%:55:1E0:40:30:24:6:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:27 0/1:49:32:14:18:37:86.49%:99:4.8717E-16:47:5:4:1:37 0/0:0:0:0:0:23:0%:44:1E0:50:23:12:11:23 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:41 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:43 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/1:39:21:10:11:24:84%:97:1.8789E-10:41:4:1:3:25 0/0:0:0:0:0:17:0%:33:1E0:40:17:13:4:19 0/1:43:29:16:13:38:76.32%:99:1.977E-13:37:9:6:3:40 0/0:38:1:1:0:33:3.03%:52:5E-1:43:32:20:12:34 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:26 0/1:43:18:6:12:22:81.82%:81:7.1052E-9:34:4:3:1:23 0/0:0:0:0:0:11:0%:22:1E0:39:11:10:1:12 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:24:3:30 0/1:46:25:18:7:30:83.33%:99:2.745E-12:42:5:3:2:30 0/1:44:22:5:17:28:78.57%:99:1.0343E-10:36:5:3:2:28 0/1:44:35:16:19:38:89.74%:99:4.5343E-18:40:4:2:2:39 0/1:45:27:7:20:30:87.1%:99:1.125E-13:35:4:2:2:31 0/0:0:0:0:0:15:0%:29:1E0:35:15:11:4:17 0/0:37:1:0:1:38:2.63%:58:5E-1:44:37:16:21:39 0/0:0:0:0:0:19:0%:37:1E0:38:19:15:4:22 0/0:60:1:0:1:39:2.56%:62:5E-1:40:38:24:14:40 1/1:40:24:17:7:26:92.31%:99:7.6222E-13:32:2:1:1:26 0/1:42:20:9:11:25:76.92%:87:1.8273E-9:42:6:5:1:26 1/1:40:19:6:13:21:90.48%:93:4.7003E-10:31:2:0:2:21 0/1:38:47:21:26:50:88.68%:99:7.1833E-24:36:6:1:5:53 0/1:41:38:20:18:42:88.37%:99:2.5797E-19:39:5:3:2:43 0/1:41:26:12:14:32:78.79%:99:2.5824E-12:38:7:2:5:33 0/0:36:3:0:3:28:10.71%:28:1.1818E-1:39:25:12:13:28 1/1:40:35:20:15:37:92.11%:99:1.5466E-18:41:3:2:1:38 0/0:0:0:0:0:10:0%:17:1E0:36:10:8:2:10 0/0:0:0:0:0:22:0%:40:1E0:36:22:20:2:26 0/0:0:0:0:0:27:0%:52:1E0:37:27:20:7:27 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:36 0/0:37:4:3:1:36:11.11%:34:5.7257E-2:41:32:12:20:36 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:49:4:4:0:45:8.89%:50:5.8311E-2:39:41:24:17:46 0/1:37:18:16:2:24:75%:77:1.8413E-8:36:6:4:2:24 0/0:45:2:2:0:37:5.41%:50:2.4658E-1:39:35:15:20:44 0/1:40:32:15:17:36:86.49%:99:4.8717E-16:35:5:1:4:38 0/1:44:23:11:12:29:79.31%:99:3.103E-11:46:5:4:1:30 0/0:0:0:0:0:45:0%:85:1E0:39:45:31:14:46 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/1:42:21:14:7:29:72.41%:88:1.2841E-9:40:8:3:5:29 0/1:45:35:21:14:44:77.78%:99:1.6883E-16:38:9:6:3:45 0/0:38:1:0:1:29:3.45%:45:5E-1:43:28:10:18:30 1/1:42:24:11:13:26:92.31%:99:7.6222E-13:46:2:2:0:27 0/0:0:0:0:0:19:0%:37:1E0:39:19:13:6:21 0/0:60:1:0:1:27:3.7%:41:5E-1:38:26:14:12:29 0/0:36:2:1:1:26:7.69%:30:2.451E-1:41:24:16:8:28 0/1:43:27:12:15:34:77.14%:99:1.2926E-12:37:8:5:3:36 0/1:42:33:15:18:41:80.49%:99:1.0617E-15:34:8:6:2:42 0/0:0:0:0:0:54:0%:99:1E0:39:54:22:32:56 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 MTB_anc 976896 . T TT,TG,TTGG,TTGGG,TTG . PASS AC=7,3,15,8,9;AF=0.023,0.010,0.050,0.027,0.030;AN=298;HOM=0;NC=0;set GT:ABQ:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:51:0:3:48:6.25%:59:1.2105E-1:44:45:26:19:49 0/0:0:0:0:17:0%:33:1E0:47:17:10:7:17 0/1:37:16:0:45:34.04%:71:7.7086E-8:37:4:4:0:47 0/0:37:2:0:21:9.52%:25:2.439E-1:50:19:10:9:21 0/0:60:0:1:25:4%:38:5E-1:49:24:16:8:25 0/0:0:0:0:14:0%:25:1E0:45:14:6:8:14 0/0:55:2:0:44:4.55%:60:2.4713E-1:44:42:17:25:44 0/1:36:6:0:12:46.15%:29:1.0823E-3:0:0:0:0:13 0/0:38:1:0:31:3.23%:48:5E-1:48:30:15:15:32 0/0:26:1:1:19:10%:21:2.4359E-1:52:18:7:11:21 0/0:38:1:0:32:3.12%:48:5E-1:44:31:12:19:32 0/0:49:2:0:37:5.41%:47:2.4648E-1:45:34:17:17:37 0/2:47:7:10:20:73.91%:86:2.0936E-9:60:1:0:1:23 0/0:45:1:2:42:7.14%:49:1.2048E-1:42:39:18:21:42 0/3:36:5:1:12:50%:29:1.0823E-3:0:0:0:0:12 0/1:37:9:0:21:40.91%:37:1.6826E-4:42:3:3:0:22 0/0:60:1:0:21:4.76%:31:5E-1:49:20:10:10:21 0/0:36:1:1:19:10.53%:18:2.4286E-1:40:16:11:5:20 0/0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:30:1:0:10:10%:11:5E-1:39:9:9:0:11 0/4:44:4:3:17:38.89%:28:1.548E-3:34:3:2:1:18 0/0:44:1:1:41:4.88%:53:2.4684E-1:44:38:18:20:42 0/2:50:5:4:31:29.03%:30:8.4928E-4:49:17:9:8:32 0/0:51:2:3:54:9.26%:52:2.8261E-2:46:47:31:16:55 0/0:49:2:0:30:6.67%:37:2.4561E-1:42:27:7:20:30 0/0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:37:1:0:31:3.23%:48:5E-1:41:30:13:17:31 0/0:46:3:2:25:20%:14:2.4548E-2:44:18:8:10:25 0/0:33:0:1:24:4.17%:34:5E-1:47:23:15:8:25 0/5:44:10:11:26:80.77%:99:1.8578E-12:0:0:0:0:26 0/0:38:2:3:30:16.67%:19:2.5729E-2:42:23:13:10:30 0/3:39:6:10:22:69.57%:87:1.6637E-9:0:0:0:0:23 0/1:37:12:0:29:40%:52:5.2605E-6:43:3:2:1:30 0/0:26:0:1:28:3.57%:41:5E-1:42:26:15:11:29 0/4:42:9:4:27:46.43%:70:9.6148E-8:0:0:0:0:29 0/0:49:0:2:28:7.14%:34:2.4545E-1:41:26:8:18:28 0/0:38:0:1:35:2.86%:55:5E-1:44:34:19:15:35 0/0:38:0:1:49:2.04%:76:5E-1:46:47:29:18:51 0/5:45:17:14:37:81.58%:99:7.3316E-16:47:4:0:4:39 0/0:37:0:1:41:2.38%:66:5E-1:44:40:21:19:43 0/0:0:0:0:7:0%:14:1E0:37:7:7:0:7 0/0:38:1:1:37:5.26%:50:2.4658E-1:45:35:20:15:42 0/0:33:1:0:27:3.7%:38:5E-1:41:25:13:12:28 0/0:0:0:0:14:0%:25:1E0:49:14:7:7:16 0/0:0:0:0:27:0%:52:1E0:47:27:12:15:28 0/0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/1:37:8:0:16:50%:41:7.77E-5:0:0:0:0:16 0/0:37:0:1:27:3.7%:41:5E-1:39:26:11:15:27 0/2:40:7:7:21:63.64%:59:1.2025E-6:35:5:4:1:22 0/0:53:2:2:46:8.7%:49:5.8402E-2:44:42:18:24:47 0/0:60:0:1:13:7.69%:14:5E-1:52:11:6:5:14 0/0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/0:38:1:0:27:3.7%:38:5E-1:48:24:11:13:28 0/0:35:2:1:32:9.38%:31:1.1864E-1:45:27:10:17:32 0/0:37:0:1:20:5%:27:5E-1:44:19:2:17:20 0/0:43:0:3:32:9.38%:31:1.1864E-1:40:27:16:11:32 0/0:38:0:1:26:3.85%:38:5E-1:41:25:11:14:26 0/0:0:0:0:12:0%:21:1E0:36:12:11:1:12 0/0:49:2:0:43:4.65%:57:2.4691E-1:45:39:18:21:43 0/0:37:2:0:36:5.56%:47:2.4648E-1:45:34:19:15:37 0/5:45:8:2:21:47.62%:37:1.9541E-4:44:9:4:5:21 0/0:36:0:1:25:4%:38:5E-1:39:24:10:14:25 0/0:49:1:1:25:8%:27:2.4468E-1:43:22:10:12:26 0/0:38:1:1:27:7.41%:34:2.4528E-1:48:25:14:11:27 0/0:60:0:1:31:3.23%:48:5E-1:43:30:15:15:31 0/0:44:1:2:52:5.77%:66:1.2136E-1:45:49:23:26:54 0/0:60:1:0:36:2.78%:55:5E-1:47:35:15:20:36 0/0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:60:0:1:19:5.26%:28:5E-1:45:18:10:8:21 0/0:32:0:1:24:4.17%:34:5E-1:44:23:13:10:24 0/0:46:1:1:32:6.25%:40:2.4603E-1:48:30:17:13:33 0/0:36:0:1:30:3.33%:44:5E-1:46:29:17:12:30 0/0:49:1:3:30:13.33%:26:5.62E-2:48:26:17:9:31 0/0:33:0:1:29:3.45%:45:5E-1:51:28:15:13:30 0/5:37:11:16:28:87.1%:99:1.5465E-14:31:2:1:1:31 0/0:38:1:1:21:9.52%:25:2.439E-1:46:19:10:9:22 0/0:48:0:2:17:11.76%:15:2.4194E-1:41:14:8:6:17 0/0:55:2:0:28:7.14%:34:2.4528E-1:45:25:14:11:29 0/4:38:6:4:17:55.56%:52:5.4125E-6:0:0:0:0:18 0/0:37:2:0:30:6.67%:37:2.4576E-1:43:28:15:13:32 0/0:0:0:0:27:0%:52:1E0:41:27:8:19:29 0/5:41:15:7:33:66.67%:99:1.0343E-10:44:5:2:3:33 0/0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/4:36:7:2:24:37.5%:42:5.9538E-5:60:1:0:1:24 0/0:29:0:1:24:4.17%:34:5E-1:41:23:8:15:26 ./.:.:.:.:.:.:.:.:.:.:.:.:11 0/1:36:10:0:17:58.82%:52:5.4125E-6:0:0:0:0:17 0/0:0:0:0:20:0%:36:1E0:43:20:6:14:21 0/1:36:11:0:28:39.29%:49:1.0096E-5:36:2:2:0:28 0/0:38:1:0:27:3.7%:38:5E-1:43:25:8:17:29 0/0:52:2:1:37:8.11%:43:1.1986E-1:48:34:16:18:38 0/0:60:1:0:23:4.35%:34:5E-1:49:22:11:11:23 0/0:51:0:3:40:7.5%:47:1.2013E-1:41:36:14:22:40 0/0:38:0:1:38:2.63%:58:5E-1:45:37:15:22:38 0/0:0:0:0:43:0%:82:1E0:43:43:18:25:44 0/0:49:2:0:24:8.33%:28:2.4444E-1:43:21:9:12:26 0/0:60:0:1:23:4.35%:34:5E-1:38:22:10:12:25 0/3:38:5:6:21:47.83%:58:1.4176E-6:0:0:0:0:23 0/0:48:1:1:39:5.13%:54:2.4675E-1:42:37:21:16:39 0/3:46:14:8:33:66.67%:99:2.9149E-12:38:1:1:0:33 0/3:49:2:5:16:43.75%:35:2.9138E-4:0:0:0:0:17 0/3:42:13:11:32:72.73%:99:3.101E-14:0:0:0:0:33 0/3:47:9:5:26:53.85%:69:1.0315E-7:31:1:0:1:26 0/0:37:0:1:22:4.55%:31:5E-1:42:21:10:11:24 0/4:35:6:1:11:63.64%:35:2.9138E-4:0:0:0:0:11 0/5:42:11:14:26:83.33%:99:5.4444E-14:34:1:0:1:31 0/3:47:12:12:39:61.54%:99:2.0568E-13:37:1:1:0:39 0/3:40:6:2:28:28.57%:41:7.77E-5:0:0:0:0:28 0/0:32:0:2:31:6.45%:40:2.459E-1:46:29:21:8:31 0/0:32:0:1:30:3.33%:44:5E-1:41:29:8:21:31 0/0:28:0:1:39:2.56%:58:5E-1:45:37:17:20:40 0/0:36:0:1:30:3.33%:44:5E-1:44:29:7:22:31 0/3:34:12:3:16:88.24%:75:2.8282E-8:32:1:0:1:18 0/0:38:0:1:40:2.5%:62:5E-1:43:39:16:23:41 0/4:30:8:6:23:56%:76:2.4927E-8:0:0:0:0:25 0/3:41:15:14:39:70.73%:99:2.6212E-16:60:1:0:1:43 0/0:0:0:0:26:0%:47:1E0:39:26:17:9:27 0/0:38:1:0:27:3.7%:41:5E-1:42:26:12:14:27 0/0:36:0:1:23:4.35%:34:5E-1:39:22:7:15:24 0/0:37:0:3:53:5.66%:66:1.2136E-1:40:49:21:28:55 0/0:60:1:0:41:2.44%:66:5E-1:40:40:21:19:42 0/0:38:0:1:34:2.94%:51:5E-1:41:33:14:19:34 0/0:38:0:1:27:3.7%:41:5E-1:39:26:12:14:27 0/0:60:1:0:43:2.33%:70:5E-1:39:42:22:20:43 0/0:27:0:2:15:13.33%:10:2.381E-1:34:9:6:3:15 0/4:34:8:3:23:40.74%:49:1.0096E-5:37:2:2:0:28 0/4:33:12:8:29:60.61%:99:7.2544E-12:0:0:0:0:33 0/3:36:10:17:37:67.5%:99:1.5465E-14:36:2:1:1:40 0/0:60:1:0:34:2.94%:51:5E-1:40:33:13:20:35 0/0:0:0:0:8:0%:14:1E0:35:8:6:2:8 0/0:0:0:0:30:0%:55:1E0:39:30:12:18:31 0/5:36:19:17:43:76.6%:99:1.2627E-18:54:4:4:0:48 0/0:34:2:0:23:8.33%:25:2.439E-1:35:19:16:3:24 0/5:37:12:27:43:82.98%:99:2.1258E-21:49:2:2:0:47 0/0:49:0:2:37:5.41%:47:2.4648E-1:38:34:15:19:40 0/0:32:0:3:34:8.82%:34:1.1905E-1:42:29:15:14:34 0/0:34:1:0:46:2.17%:73:5E-1:39:45:29:16:47 0/0:43:0:4:37:10.53%:34:5.7257E-2:39:32:14:18:38 0/0:38:1:0:27:3.7%:38:5E-1:41:24:15:9:28 0/0:0:0:0:30:0%:55:1E0:40:30:18:12:31 0/0:38:2:0:46:4.35%:64:2.4719E-1:45:43:24:19:46 0/5:43:8:17:32:78.12%:99:2.0853E-13:49:2:0:2:32 0/0:49:1:1:29:6.9%:37:2.4561E-1:41:27:12:15:31 0/3:43:2:6:20:36.36%:36:2.0568E-4:37:1:1:0:22 0/3:36:10:4:30:45.16%:65:2.5454E-7:49:2:1:1:31 0/3:43:12:2:28:50%:65:2.5454E-7:34:2:1:1:28 0/0:38:2:0:37:5.41%:50:2.4658E-1:42:35:16:19:37 0/0:30:0:1:43:2.33%:70:5E-1:41:42:21:21:45 0/0:26:1:1:53:3.64%:77:2.4766E-1:40:52:21:31:56 0/0:37:2:1:38:7.89%:43:1.1986E-1:44:34:18:16:39 MTB_anc 976897 . G T . PASS AC=16;AF=0.053;AN=300;ANN=T|missense_variant|MODERATE|PPE13_Rv0878c|gene900|transcript|Transcript_gene900|Coding|1/1|c.1307C>A|p.Pro436Gln|1307/1332|1307/1332|436/443||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.976897G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.976897G>T||||||;NC=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:85:1E0:44:45:26:19:48 0/0:34:1:1:0:17:5.88%:24:5E-1:47:16:9:7:17 0/0:37:2:2:0:37:5.41%:50:2.4658E-1:38:35:14:21:38 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:24 0/0:0:0:0:0:12:0%:21:1E0:48:12:6:6:13 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:44 0/0:0:0:0:0:15:0%:29:1E0:35:15:5:10:15 0/0:0:0:0:0:32:0%:59:1E0:49:31:15:16:32 0/0:0:0:0:0:21:0%:40:1E0:49:21:8:13:21 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:37:0%:67:1E0:44:35:18:17:37 0/0:0:0:0:0:22:0%:40:1E0:50:21:8:13:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:42 0/0:0:0:0:0:8:0%:14:1E0:36:8:5:3:8 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:14 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:21 0/0:0:0:0:0:16:0%:25:1E0:43:14:10:4:20 0/0:43:2:1:1:18:11.11%:18:2.4286E-1:43:16:8:8:19 0/1:40:8:8:0:12:66.67%:31:6.7304E-4:30:4:2:2:13 0/0:38:1:1:0:21:4.76%:31:5E-1:39:20:8:12:22 0/0:0:0:0:0:39:0%:70:1E0:45:38:16:22:41 0/0:37:1:0:1:29:3.57%:41:5E-1:49:27:11:16:29 0/0:0:0:0:0:54:0%:93:1E0:46:49:31:18:54 0/0:0:0:0:0:29:0%:52:1E0:41:27:8:19:29 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:29 0/0:35:3:2:1:25:12%:25:1.1735E-1:45:22:10:12:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:30:0%:51:1E0:41:28:15:13:30 0/0:0:0:0:0:20:0%:36:1E0:40:20:6:14:21 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:22 0/0:0:0:0:0:29:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:33:1:0:1:26:3.85%:38:5E-1:43:25:7:18:27 0/0:0:0:0:0:35:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:48:0%:89:1E0:45:47:30:17:51 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:37 0/0:0:0:0:0:42:0%:78:1E0:43:41:20:21:43 0/1:37:7:7:0:8:87.5%:31:6.993E-4:38:1:0:1:9 0/0:0:0:0:0:41:0%:74:1E0:44:40:21:19:42 0/0:0:0:0:0:25:0%:44:1E0:41:24:12:12:26 0/0:38:1:1:0:14:7.14%:17:5E-1:50:13:6:7:16 0/0:60:1:0:1:28:3.57%:41:5E-1:45:27:13:14:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:10:0%:17:1E0:40:10:5:5:12 0/0:0:0:0:0:27:0%:47:1E0:40:26:12:14:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:26 0/0:0:0:0:0:43:0%:74:1E0:44:39:16:23:46 0/0:0:0:0:0:15:0%:25:1E0:50:14:8:6:15 0/1:35:10:6:4:29:34.48%:34:3.8387E-4:41:19:8:11:29 0/0:0:0:0:0:27:0%:47:1E0:49:26:11:15:28 0/0:0:0:0:0:31:0%:51:1E0:47:28:12:16:33 0/0:0:0:0:0:19:0%:37:1E0:45:19:2:17:20 0/0:0:0:0:0:32:0%:55:1E0:40:30:16:14:32 0/0:0:0:0:0:25:0%:44:1E0:42:24:10:14:26 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:12 0/0:0:0:0:0:41:0%:74:1E0:45:39:19:20:43 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:41:4:1:3:22:18.18%:15:5.3885E-2:43:18:12:6:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:0:0:0:0:26:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:26 0/0:31:1:1:0:31:3.23%:48:5E-1:43:30:14:16:31 0/0:35:4:4:0:53:7.55%:62:5.8946E-2:46:49:21:28:54 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:46:1:1:0:28:3.57%:41:5E-1:47:27:13:14:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:21 0/0:0:0:0:0:24:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:30 0/0:56:1:0:1:29:3.45%:45:5E-1:50:28:15:13:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:30 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:0:0:0:0:16:0%:29:1E0:42:15:8:7:17 0/0:0:0:0:0:28:0%:52:1E0:47:27:17:10:30 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:14 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:31 0/0:0:0:0:0:27:0%:47:1E0:41:26:7:19:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:41:23:7:16:25 0/0:0:0:0:0:10:0%:17:1E0:39:10:4:6:11 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:14 0/0:0:0:0:0:21:0%:40:1E0:43:21:6:15:21 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:21 0/0:0:0:0:0:26:0%:48:1E0:43:25:6:19:27 0/0:37:2:2:0:37:5.41%:50:2.4658E-1:49:35:15:20:37 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:23 0/0:0:0:0:0:38:0%:70:1E0:43:37:13:24:39 0/0:38:1:1:0:37:2.7%:59:5E-1:44:36:14:22:38 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:44 0/0:0:0:0:0:26:0%:44:1E0:43:24:9:15:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:25 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:23 0/0:35:4:4:0:37:10.81%:38:5.7399E-2:45:33:17:16:38 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:17:0%:33:1E0:47:17:6:11:17 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:34:4:4:0:24:16.67%:18:5.461E-2:43:20:6:14:24 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:8 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:45:3:3:0:31:9.68%:34:1.1885E-1:46:28:18:10:31 0/0:35:4:3:1:31:12.9%:29:5.6405E-2:43:27:5:22:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:32:1:0:1:31:3.23%:48:5E-1:43:30:7:23:31 0/0:0:0:0:0:15:0%:29:1E0:36:15:11:4:17 1/1:44:36:15:21:38:97.3%:99:2.1762E-20:38:1:0:1:40 0/0:0:0:0:0:24:0%:44:1E0:35:24:9:15:27 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:44 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:28 0/0:41:4:3:1:26:15.38%:20:5.5222E-2:42:22:10:12:27 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:24 0/0:38:1:0:1:52:1.92%:83:5E-1:40:51:22:29:55 0/0:36:2:1:1:42:4.76%:57:2.4699E-1:40:40:21:19:42 0/0:40:4:2:2:34:11.76%:31:5.6946E-2:40:30:12:18:34 1/1:39:25:13:12:28:92.59%:99:2.0853E-13:38:2:0:2:29 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:42 0/1:36:6:5:1:16:37.5%:20:8.837E-3:34:10:3:7:16 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:23 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:39 0/1:42:27:10:17:33:81.82%:99:4.5192E-13:41:6:4:2:35 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:45 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:11 0/0:0:0:0:0:44:0%:81:1E0:40:44:18:26:46 0/0:31:1:0:1:37:2.7%:59:5E-1:39:36:15:21:40 0/0:48:2:2:0:33:6.06%:44:2.4615E-1:41:31:14:17:34 0/0:0:0:0:0:42:0%:77:1E0:39:42:28:14:46 0/0:0:0:0:0:36:0%:59:1E0:39:32:14:18:37 0/0:0:0:0:0:24:0%:44:1E0:44:23:13:10:27 0/0:35:4:2:2:29:13.79%:26:5.5981E-2:41:25:15:10:30 0/0:38:4:2:2:45:8.89%:50:5.8311E-2:44:41:25:16:46 0/0:0:0:0:0:29:0%:55:1E0:42:29:8:21:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:31 0/0:37:2:2:0:19:10.53%:21:2.4324E-1:40:17:7:10:19 0/0:38:1:1:0:33:3.03%:52:5E-1:39:32:11:21:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:35:5:3:2:37:13.51%:32:2.706E-2:43:32:15:17:37 0/1:35:9:6:3:43:20.93%:29:1.2263E-3:43:34:14:20:45 0/0:0:0:0:0:54:0%:99:1E0:39:53:22:31:57 0/0:0:0:0:0:38:0%:70:1E0:43:37:19:18:38 MTB_anc 983485 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0885_Rv0885|gene907|transcript|Transcript_gene907|Coding|1/1|c.724T>G|p.Ser242Ala|724/1023|724/1023|242/340||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.983485T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.983485T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:17:7:10:18:94.44%:86:2.0936E-9:60:1:1:0:19 1/1:46:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:21:18:40:97.5%:99:3.8137E-22:37:1:0:1:41 1/1:46:69:27:42:69:100%:99:4.233E-41:0:0:0:0:69 1/1:47:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:50:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:33:13:20:34:97.06%:99:1.2301E-18:37:1:0:1:35 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:24:13:11:25:96%:99:3.101E-14:0:0:0:0:26 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:61:28:33:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:38:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:46:22:24:47:97.87%:99:2.9526E-26:38:1:1:0:48 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 MTB_anc 985621 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0887c_Rv0887c|gene909|transcript|Transcript_gene909|Coding|1/1|c.351C>T|p.Tyr117Tyr|351/459|351/459|117/152||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.985621G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.985621G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:51:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:13:15:29:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:18:10:8:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:50:36:14:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 989094 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|citA_Rv0889c|gene911|transcript|Transcript_gene911|Coding|1/1|c.768G>C|p.Glu256Asp|768/1122|768/1122|256/373||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.989094C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.989094C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:48 0/0:0:0:0:0:7:0%:14:1E0:53:7:4:3:7 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:53 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:51:0%:97:1E0:44:51:20:31:52 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:48 0/0:0:0:0:0:12:0%:21:1E0:39:12:7:5:12 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:49 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:29 0/0:0:0:0:0:17:0%:33:1E0:39:17:10:7:17 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:18:0%:32:1E0:44:18:6:12:18 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:46:0%:85:1E0:46:46:25:21:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:8:20:28 0/0:0:0:0:0:54:0%:99:1E0:42:54:26:28:54 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:44 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:15 0/0:0:0:0:0:43:0%:82:1E0:42:43:16:27:43 0/0:0:0:0:0:17:0%:33:1E0:42:17:6:11:17 0/0:0:0:0:0:40:0%:74:1E0:45:40:15:25:41 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:43 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:45 0/0:0:0:0:0:13:0%:25:1E0:42:13:7:6:13 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:39 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:46 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:34 0/0:0:0:0:0:16:0%:29:1E0:42:16:10:6:16 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:17 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:44 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:17 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:14 1/1:45:29:9:20:30:96.67%:99:2.6212E-16:60:1:1:0:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:36 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:45 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:51:0%:97:1E0:39:51:26:25:52 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:36 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:16 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:21 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:21 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:25:11:36 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:30 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:16 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:42 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:25 0/0:0:0:0:0:47:0%:89:1E0:38:47:23:24:48 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:31 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:39 0/0:0:0:0:0:32:0%:59:1E0:37:32:19:13:33 0/0:0:0:0:0:44:0%:81:1E0:37:44:17:27:45 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:47 0/0:0:0:0:0:41:0%:78:1E0:38:41:23:18:42 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:43 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:38 0/0:0:0:0:0:39:0%:74:1E0:38:39:22:17:39 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:39:34:23:11:35 0/0:0:0:0:0:54:0%:99:1E0:35:54:29:25:54 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:32 0/0:60:1:0:1:40:2.5%:62:5E-1:40:39:18:21:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:16:0%:29:1E0:45:16:6:10:16 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:14:24:38 0/0:0:0:0:0:18:0%:32:1E0:40:18:13:5:19 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:54:0%:99:1E0:42:54:35:19:54 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 MTB_anc 994494 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv0892_Rv0892|gene914|transcript|Transcript_gene914|Coding|1/1|c.642G>T|p.Ser214Ser|642/1488|642/1488|214/495||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.994494G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.994494G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:32:19:13:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:49:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:48:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:52:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:52:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:49:33:16:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:19:10:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:73:45:28:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:44:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:60:34:26:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:53:33:20:54:98.15%:99:2.2126E-30:20:1:1:0:57 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:30:14:45:97.78%:99:4.4304E-25:39:1:0:1:45 1/1:38:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:44:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:51:32:19:52:98.08%:99:3.3479E-29:60:1:1:0:52 1/1:38:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:61:33:28:61:100%:99:2.609E-36:0:0:0:0:62 1/1:40:36:18:18:37:97.3%:99:2.1762E-20:60:1:0:1:38 MTB_anc 996982 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0894_Rv0894|gene916|transcript|Transcript_gene916|Coding|1/1|c.459G>A|p.Ala153Ala|459/1182|459/1182|153/393||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.996982G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.996982G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:52:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:53:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:21:14:7:22:95.45%:99:1.0931E-11:60:1:0:1:23 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:19:6:13:20:95%:98:1.5234E-10:39:1:0:1:20 1/1:47:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:41:18:23:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:48:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:66:38:28:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:55:28:27:56:98.21%:99:1.4593E-31:38:1:1:0:56 1/1:45:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:14:19:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 MTB_anc 1002251 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0897c_Rv0897c|gene919|transcript|Transcript_gene919|Coding|1/1|c.165C>T|p.Val55Val|165/1608|165/1608|55/535||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1002251G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1002251G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:46:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:11:10:22:95.45%:99:1.0931E-11:37:1:1:0:22 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:35:20:15:36:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 MTB_anc 1010204 . C CG . PASS AC=298;AF=0.993;AN=300;ANN=CG|frameshift_variant|HIGH|Rv0907_Rv0907|gene929|transcript|Transcript_gene929|Coding|1/1|c.71dupG|p.Cys25fs|72/1599|72/1599|24/532||INFO_REALIGN_3_PRIME,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1010204_1010205insG||||||,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1010204_1010205insG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:45:23:22:45:97.83%:99:1.1441E-25:31:1:1:0:46 1/1:51:22:7:15:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:49:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:23:8:15:24:95.83%:99:7.7525E-13:33:1:1:0:24 1/1:47:48:22:26:49:97.96%:99:1.554E-28:0:0:0:0:49 1/1:52:41:20:21:43:95.35%:99:1.4915E-22:35:2:2:0:43 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:47:38:20:18:39:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:47:38:18:20:38:97.44%:99:1.4508E-22:0:0:0:0:38 1/1:46:51:25:26:52:98.08%:99:3.3479E-29:34:1:0:1:52 1/1:53:16:9:7:17:94.12%:81:7.7134E-9:32:1:0:1:17 1/1:44:51:29:22:53:96.23%:99:2.3675E-28:35:2:1:1:53 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:32:16:16:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:17:18:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:16:14:31:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:45:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:22:12:10:22:95.65%:99:2.9149E-12:24:1:1:0:23 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:31:11:20:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:23:9:14:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:9:13:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:24:13:11:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:46:35:17:18:36:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:44:25:10:15:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:32:16:16:33:96.97%:99:4.7095E-18:35:1:1:0:33 1/1:48:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:37:12:25:38:97.37%:99:5.6582E-21:35:1:0:1:38 1/1:45:39:19:20:38:97.5%:99:3.8137E-22:60:1:1:0:40 1/1:50:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:46:48:26:22:48:97.96%:99:1.554E-28:0:0:0:0:49 1/1:44:54:28:26:55:98.18%:99:5.6837E-31:33:1:1:0:55 1/1:43:27:12:15:28:96.43%:99:3.7915E-15:34:1:1:0:28 1/1:44:43:17:26:44:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:39:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:17:10:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:36:17:19:38:92.31%:99:4.2179E-19:33:3:1:2:39 1/1:43:34:14:20:35:94.44%:99:1.5887E-18:46:2:2:0:36 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:17:22:40:97.5%:99:3.8137E-22:60:1:1:0:40 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:19:20:40:95.12%:99:2.1258E-21:35:2:2:0:41 1/1:50:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:11:11:23:95.65%:99:2.9149E-12:32:1:0:1:23 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:44:32:12:44:97.78%:99:4.4304E-25:60:1:1:0:45 1/1:42:31:13:18:30:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:43:61:31:30:63:95.31%:99:3.4466E-34:34:2:1:1:64 1/1:42:31:11:20:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:45:36:18:18:37:97.3%:99:2.1762E-20:32:1:0:1:37 1/1:44:30:19:11:30:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:48:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:32:10:22:32:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:43:40:21:19:42:95.24%:99:5.6346E-22:49:2:1:1:42 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:22:12:35:97.14%:99:3.2089E-19:34:1:1:0:35 1/1:47:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:36:15:21:38:94.74%:99:1.1316E-19:33:2:0:2:38 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:12:12:23:96%:99:3.101E-14:0:0:0:0:24 1/1:45:30:11:19:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:11:20:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:35:16:19:35:97.22%:99:8.9137E-21:0:0:0:0:35 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:15:8:7:16:93.75%:75:2.8282E-8:35:1:1:0:16 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 0/1:52:24:12:12:29:82.76%:99:9.2544E-12:43:5:2:3:29 1/1:41:43:17:26:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:34:14:20:36:94.44%:99:1.5887E-18:34:2:1:1:36 1/1:45:34:21:13:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:20:9:11:22:90.91%:98:1.3117E-10:33:2:0:2:22 1/1:51:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:28:15:13:30:93.33%:99:4.194E-15:34:2:1:1:30 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:29:12:17:30:96.67%:99:2.6212E-16:34:1:1:0:30 1/1:41:56:29:27:57:98.25%:99:3.7452E-32:33:1:0:1:57 1/1:44:37:21:16:38:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:45:59:29:30:61:96.72%:99:5.0953E-33:46:2:2:0:61 1/1:45:20:11:9:21:95.24%:99:4.0873E-11:32:1:0:1:21 1/1:42:31:16:15:32:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:42:20:11:9:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:45:46:21:25:47:97.87%:99:2.9526E-26:32:1:0:1:47 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:12:18:32:93.75%:99:3.0612E-16:48:2:1:1:32 1/1:41:55:25:30:56:98.21%:99:1.4593E-31:33:1:0:1:56 1/1:43:37:12:25:39:94.87%:99:5.6582E-21:20:1:1:0:39 0/1:43:24:14:10:27:88.89%:99:2.0853E-12:29:3:3:0:27 1/1:49:24:11:13:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:47:35:24:11:35:97.22%:99:8.3613E-20:32:1:0:1:36 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:24:21:45:97.83%:99:9.6314E-27:0:0:0:0:45 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:50:29:21:52:96.15%:99:9.0394E-28:46:2:1:1:52 1/1:45:44:24:20:46:95.65%:99:2.7459E-24:34:2:1:1:46 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:28:16:45:95.65%:99:2.7459E-24:50:2:2:0:46 1/1:43:41:20:21:42:97.62%:99:2.5612E-23:33:1:1:0:42 1/1:40:50:21:29:49:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:48:22:26:49:97.96%:99:1.9625E-27:37:1:1:0:49 1/1:43:35:15:20:36:97.22%:99:8.3613E-20:24:1:1:0:36 1/1:45:33:14:19:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:60:29:31:61:96.77%:99:1.3256E-33:33:2:0:2:62 1/1:41:62:35:27:65:93.94%:99:2.4296E-33:37:4:1:3:66 1/1:41:24:9:15:25:96%:99:3.101E-14:0:0:0:0:26 1/1:41:23:9:14:23:95.83%:99:7.7525E-13:33:1:1:0:24 1/1:44:53:26:27:54:98.15%:99:2.2126E-30:32:1:1:0:54 1/1:41:38:16:22:38:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:44:48:28:20:50:96%:99:1.3143E-26:35:2:1:1:50 1/1:39:45:24:21:46:97.83%:99:1.1441E-25:33:1:0:1:46 1/1:42:46:32:14:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:53:25:28:53:98.15%:99:2.2126E-30:31:1:0:1:54 1/1:43:43:21:22:43:97.73%:99:1.7144E-24:37:1:1:0:44 1/1:41:40:27:13:42:95.24%:99:5.6346E-22:32:2:1:1:42 1/1:38:53:23:30:54:94.64%:99:8.323E-29:41:3:2:1:56 1/1:41:42:16:26:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:54:22:32:55:96.43%:99:4.2321E-30:32:2:1:1:56 1/1:40:41:19:22:42:97.62%:99:2.5612E-23:33:1:1:0:42 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:58:28:30:59:98.31%:99:2.4634E-33:34:1:0:1:59 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:47:25:22:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:43:24:19:43:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:41:48:21:27:48:97.96%:99:1.9625E-27:33:1:1:0:49 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:22:21:45:95.56%:99:1.0412E-23:34:2:1:1:45 1/1:42:42:24:18:44:95.45%:99:3.9431E-23:33:2:0:2:44 1/1:45:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:26:11:15:28:92.86%:99:5.6872E-14:32:2:1:1:28 1/1:43:34:14:20:35:97.14%:99:3.2089E-19:30:1:0:1:35 1/1:41:37:14:23:37:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:42:57:31:26:55:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 1010578 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv0907_Rv0907|gene929|transcript|Transcript_gene929|Coding|1/1|c.443A>C|p.Lys148Thr|443/1599|443/1599|148/532||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1010578A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1010578A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:48 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:58:0%:99:1E0:47:58:32:26:58 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:52:0%:96:1E0:50:52:26:26:52 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:45:0%:85:1E0:47:45:23:22:45 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:55:0%:99:1E0:42:55:23:32:56 0/0:0:0:0:0:28:0%:51:1E0:54:28:18:10:28 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:54 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:17:0%:33:1E0:49:17:10:7:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:16:0%:29:1E0:50:16:10:6:16 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:47:0%:89:1E0:47:47:25:22:48 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:15:0%:29:1E0:43:15:9:6:15 0/0:0:0:0:0:40:0%:74:1E0:45:40:15:25:40 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:33 0/0:39:1:0:1:27:3.7%:41:5E-1:43:26:18:8:28 1/1:42:39:18:21:41:95.12%:99:2.1258E-21:36:2:2:0:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:41 0/0:0:0:0:0:53:0%:99:1E0:51:53:23:30:55 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:41 0/0:0:0:0:0:67:0%:99:1E0:44:67:32:35:68 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:43:0%:82:1E0:46:43:25:18:43 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:30 0/0:0:0:0:0:38:0%:70:1E0:47:38:12:26:39 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:38 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:48 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:40 0/0:0:0:0:0:46:0%:85:1E0:47:46:27:19:48 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:25 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:48 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:49:0%:93:1E0:46:49:30:19:49 0/0:0:0:0:0:66:0%:99:1E0:45:66:31:35:66 0/0:0:0:0:0:25:0%:48:1E0:48:25:19:6:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:9:0%:18:1E0:50:9:4:5:9 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:43:0%:82:1E0:50:43:22:21:43 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:25 0/0:0:0:0:0:38:0%:70:1E0:51:38:19:19:40 0/0:0:0:0:0:57:0%:99:1E0:43:57:29:28:58 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:31 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:56:0%:99:1E0:45:56:30:26:57 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:39 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:41 0/0:0:0:0:0:27:0%:52:1E0:38:27:18:9:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:32 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:29 0/0:0:0:0:0:35:0%:67:1E0:51:35:19:16:35 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:49:0%:93:1E0:39:49:19:30:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:45 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:40 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:32 0/0:0:0:0:0:40:0%:74:1E0:47:40:15:25:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:25 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:47:0%:89:1E0:46:47:19:28:48 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:12:26:39 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:47 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:47:0%:89:1E0:41:47:19:28:48 0/0:0:0:0:0:56:0%:99:1E0:42:56:26:30:57 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:27 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:55 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:24 0/0:0:0:0:0:73:0%:99:1E0:44:73:36:37:76 0/0:0:0:0:0:65:0%:99:1E0:43:65:34:31:66 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:23 0/0:0:0:0:0:57:0%:99:1E0:39:57:27:30:57 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:42 0/0:0:0:0:0:52:0%:96:1E0:44:52:20:32:54 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:45 0/0:0:0:0:0:55:0%:99:1E0:43:55:31:24:57 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:34 0/0:0:0:0:0:50:0%:92:1E0:44:50:20:30:50 0/0:0:0:0:0:44:0%:81:1E0:38:44:22:22:46 0/0:0:0:0:0:56:0%:99:1E0:41:56:32:24:59 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:40 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:48 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:57:0%:99:1E0:39:57:31:26:60 0/0:0:0:0:0:52:0%:96:1E0:43:52:30:22:54 0/0:0:0:0:0:52:0%:96:1E0:45:52:25:27:53 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:49:0%:93:1E0:44:49:21:28:49 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:41 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:46 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:49:0%:93:1E0:47:49:30:19:50 0/0:0:0:0:0:49:0%:93:1E0:44:49:21:28:51 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:45 MTB_anc 1011972 . G A . PASS AC=14;AF=0.047;AN=300;ANN=A|missense_variant|MODERATE|ctpE_Rv0908|gene930|transcript|Transcript_gene930|Coding|1/1|c.242G>A|p.Gly81Asp|242/2394|242/2394|81/797||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1011972G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1011972G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:44 0/0:0:0:0:0:14:0%:25:1E0:50:14:7:7:14 0/0:0:0:0:0:57:0%:99:1E0:48:57:31:26:57 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:30 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:22:0%:40:1E0:50:22:9:13:22 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:48 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:56:0%:99:1E0:45:56:34:22:58 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:33:1:0:1:33:3.03%:52:5E-1:46:32:10:22:33 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:58:0%:99:1E0:45:58:34:24:58 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:30 0/0:0:0:0:0:35:0%:67:1E0:49:35:14:21:35 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:18 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:60:1:1:0:29:3.45%:45:5E-1:48:28:16:12:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:14:21:35 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:26 0/0:0:0:0:0:40:0%:74:1E0:50:40:18:22:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:58:0%:99:1E0:44:58:30:28:59 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:44 0/0:0:0:0:0:51:0%:97:1E0:46:51:31:20:51 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:40:0%:74:1E0:48:40:25:15:40 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:42:0%:77:1E0:47:42:24:18:43 0/0:0:0:0:0:51:0%:97:1E0:45:51:25:26:51 0/0:0:0:0:0:18:0%:32:1E0:49:18:7:11:18 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:37 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:20 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:13:26:41 0/0:0:0:0:0:27:0%:52:1E0:49:27:8:19:27 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:53:0%:99:1E0:44:53:23:30:53 0/0:0:0:0:0:37:0%:70:1E0:43:37:25:12:37 0/0:0:0:0:0:18:0%:32:1E0:52:18:9:9:19 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 0/0:37:1:1:0:60:1.67%:98:5E-1:47:59:29:30:61 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:29 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:29 0/0:0:0:0:0:14:0%:25:1E0:48:14:6:8:14 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/0:0:0:0:0:36:0%:66:1E0:49:36:12:24:37 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:32 0/0:0:0:0:0:19:0%:37:1E0:55:19:7:12:20 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:60:1:0:1:24:4.17%:34:5E-1:43:23:13:10:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:38:0%:70:1E0:50:38:14:24:38 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:25:0%:48:1E0:50:25:13:12:25 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:47 0/0:0:0:0:0:26:0%:47:1E0:45:26:7:19:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:26:15:41 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:60:1:0:1:37:2.7%:59:5E-1:41:36:17:19:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:26:12:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:66:0%:99:1E0:43:66:32:34:67 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:47 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:41 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:50 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:45 0/0:0:0:0:0:63:0%:99:1E0:42:63:38:25:65 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:50 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:15:30:46 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:45 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:49 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:46 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:33 0/0:0:0:0:0:56:0%:99:1E0:40:56:28:28:56 0/0:0:0:0:0:64:0%:99:1E0:45:64:28:36:66 0/0:0:0:0:0:38:0%:70:1E0:43:38:11:27:40 0/0:0:0:0:0:52:0%:96:1E0:44:52:24:28:53 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:38 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:43:0%:82:1E0:43:43:13:30:44 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:46:0%:85:1E0:45:46:19:27:46 0/0:0:0:0:0:55:0%:99:1E0:42:55:28:27:56 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 MTB_anc 1014815 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0909_Rv0909|gene931|transcript|Transcript_gene931|Coding|1/1|c.135G>T|p.Gln45His|135/180|135/180|45/59||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1014815G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1014815G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:51:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:60:28:32:60:100%:99:1.035E-35:0:0:0:0:61 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:33:16:17:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:48:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:52:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:21:9:12:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:51:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:76:39:37:76:100%:99:2.711E-45:0:0:0:0:76 1/1:43:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:75:43:32:75:100%:99:1.0773E-44:0:0:0:0:75 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:61:43:18:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:48:31:17:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:69:31:38:69:100%:99:4.233E-41:0:0:0:0:70 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 MTB_anc 1015304 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv0910_Rv0910-Rv0911_Rv0911|gene932-gene933|intergenic_region|gene932-gene933|||n.1015304G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:67:30:37:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:49:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:53:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:21:13:8:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:39:20:19:40:97.5%:99:3.8137E-22:38:1:0:1:41 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:28 1/1:41:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:39:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:48:19:29:48:100%:99:1.554E-28:0:0:0:0:51 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:51 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:67:31:36:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:45:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:63:33:30:63:100%:99:1.657E-37:0:0:0:0:64 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 MTB_anc 1016956 . C T . PASS AC=72;AF=0.240;AN=300;ANN=T|intergenic_region|MODIFIER|Rv0912_Rv0912-Rv0913c_Rv0913c|gene934-gene935|intergenic_region|gene934-gene935|||n.1016956C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:50 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:24 0/0:0:0:0:0:50:0%:92:1E0:45:50:26:24:51 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:39:1:0:1:39:2.56%:62:5E-1:51:38:21:17:39 0/0:0:0:0:0:19:0%:37:1E0:47:19:13:6:19 0/0:0:0:0:0:31:0%:59:1E0:50:31:20:11:32 0/0:0:0:0:0:38:0%:70:1E0:49:38:21:17:39 1/1:51:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:44 0/0:0:0:0:0:19:0%:37:1E0:51:19:9:10:19 0/0:0:0:0:0:50:0%:92:1E0:44:50:22:28:52 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:21 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:21 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:19 1/1:47:11:8:3:12:91.67%:53:4.8074E-6:60:1:0:1:12 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:24 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:46:0%:85:1E0:43:46:17:29:46 0/0:0:0:0:0:20:0%:36:1E0:50:20:11:9:21 0/0:0:0:0:0:44:0%:81:1E0:47:44:17:27:44 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:22:0%:40:1E0:49:22:9:13:23 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:15:0%:29:1E0:41:15:5:10:15 0/0:0:0:0:0:23:0%:44:1E0:50:23:12:11:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:28 0/0:0:0:0:0:41:0%:78:1E0:49:41:18:23:41 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:0:0:0:0:49:0%:93:1E0:48:49:24:25:49 0/0:0:0:0:0:43:0%:82:1E0:44:43:31:12:43 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:14:25:40 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:23 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:36 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:40 0/0:37:1:0:1:17:5.88%:24:5E-1:46:16:7:9:17 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:19 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:46 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:26 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:36 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:39 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:18:0%:32:1E0:48:18:12:6:20 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:50:25:11:14:25 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:18:0%:32:1E0:52:18:7:11:18 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:26:0%:47:1E0:49:26:16:10:26 0/0:0:0:0:0:26:0%:47:1E0:49:26:10:16:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:16 0/0:0:0:0:0:23:0%:44:1E0:44:23:6:17:23 1/1:44:34:16:18:35:97.14%:99:3.2089E-19:39:1:1:0:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:48:36:23:13:36 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:19 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:39:1:0:1:36:2.78%:55:5E-1:50:35:18:17:36 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:25 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:55:0%:99:1E0:45:55:29:26:57 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:40 1/1:44:36:23:13:37:97.3%:99:2.1762E-20:38:1:0:1:38 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:18:8:26 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 1/1:46:36:20:16:37:97.3%:99:2.1762E-20:37:1:1:0:37 1/1:46:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:20:0%:36:1E0:49:20:8:12:21 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:43 0/0:0:0:0:0:38:0%:70:1E0:47:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:40 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:8:22:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:44 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:53 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:33 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:51:0%:97:1E0:41:51:31:20:52 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:25 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:44 0/0:0:0:0:0:57:0%:99:1E0:42:57:29:28:57 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:38 0/0:0:0:0:0:63:0%:99:1E0:40:63:32:31:64 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:42 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:41 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:53 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:36 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:56:0%:99:1E0:38:56:35:21:56 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:46 0/0:39:1:0:1:50:2%:80:5E-1:47:49:29:20:50 1/1:43:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:22 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:42 0/0:0:0:0:0:47:0%:89:1E0:40:47:22:25:47 0/0:0:0:0:0:16:0%:29:1E0:44:16:6:10:17 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 0/0:0:0:0:0:57:0%:99:1E0:44:57:28:29:58 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:40 MTB_anc 1024346 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0918_Rv0918|gene940|transcript|Transcript_gene940|Coding|1/1|c.136G>A|p.Gly46Ser|136/477|136/477|46/158||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1024346G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1024346G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:48:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:27:9:18:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:30:17:13:31:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:55:17:38:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:38:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:36:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:37:6:31:38:97.37%:99:5.7269E-22:0:0:0:0:40 1/1:37:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:35:7:28:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:42:10:32:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 1026384 . CT C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|frameshift_variant|HIGH|Rv0920c_Rv0920c|gene943|transcript|Transcript_gene943|Coding|1/1|c.432delA|p.Gly145fs|432/1320|432/1320|144/439||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1026385delT||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1026385delT||||||;HET=0;LOF=(Rv0920c_Rv0920c|gene943|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:29 0/0:0:0:0:0:62:0%:99:1E0:47:62:32:30:62 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:28 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:32:0%:59:1E0:47:32:11:21:33 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:24 0/0:0:0:0:0:26:0%:47:1E0:51:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:52:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:44 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:22 0/0:0:0:0:0:63:0%:99:1E0:44:63:32:31:65 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:6:19:27 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:15 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:19 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:54 0/0:34:1:1:0:25:4%:38:5E-1:47:24:14:10:27 0/0:0:0:0:0:32:0%:59:1E0:48:32:21:11:33 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:19 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:19:0%:37:1E0:45:19:5:14:19 0/0:0:0:0:0:27:0%:52:1E0:52:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:18:7:25 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:54:0%:99:1E0:46:54:29:25:55 0/0:0:0:0:0:45:0%:85:1E0:52:45:25:20:45 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:42 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:16:0%:29:1E0:46:16:12:4:16 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:21 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:42 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:40 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:18 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:26 0/0:0:0:0:0:13:0%:25:1E0:51:13:8:5:13 1/1:44:25:13:12:24:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:54:0%:99:1E0:47:54:23:31:55 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:46 0/0:0:0:0:0:25:0%:48:1E0:44:25:21:4:26 0/0:38:1:1:0:38:2.63%:58:5E-1:47:37:19:18:39 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:41:0%:78:1E0:50:41:19:22:41 0/0:0:0:0:0:20:0%:36:1E0:51:20:13:7:20 0/0:0:0:0:0:41:0%:78:1E0:51:41:16:25:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:40 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:21 0/0:0:0:0:0:25:0%:48:1E0:40:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:34 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:18:7:25 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:50:0%:92:1E0:48:50:23:27:50 0/0:0:0:0:0:23:0%:44:1E0:51:23:14:9:23 0/0:0:0:0:0:46:0%:85:1E0:40:46:27:19:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:41 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:39 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:44 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:51 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:59:0%:99:1E0:44:59:21:38:59 0/0:0:0:0:0:45:0%:85:1E0:42:45:17:28:45 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:61:0%:99:1E0:40:61:35:26:63 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:43 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:42 0/0:0:0:0:0:57:0%:99:1E0:39:57:27:30:59 0/0:0:0:0:0:58:0%:99:1E0:42:58:35:23:60 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:46 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:37 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:44 0/0:0:0:0:0:48:0%:89:1E0:38:48:25:23:51 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:56:0%:99:1E0:40:56:29:27:56 0/0:0:0:0:0:47:0%:89:1E0:45:47:24:23:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:43 0/0:0:0:0:0:43:0%:82:1E0:41:43:31:12:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:42 0/0:0:0:0:0:22:0%:40:1E0:39:22:8:14:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:39 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:52 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:43 MTB_anc 1028333 . A G . PASS AC=68;AF=0.227;AN=300;ANN=G|missense_variant|MODERATE|Rv0922_Rv0922|gene945|transcript|Transcript_gene945|Coding|1/1|c.649A>G|p.Met217Val|649/1653|649/1653|217/550||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1028333A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1028333A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:29:0%:55:1E0:38:29:10:19:30 0/0:0:0:0:0:16:0%:29:1E0:45:16:12:4:16 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:18 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:12 0/0:0:0:0:0:14:0%:25:1E0:42:14:11:3:18 0/0:0:0:0:0:12:0%:21:1E0:45:12:4:8:12 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:36 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:15 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:37 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:25:13:12:26:96.15%:99:5.4444E-14:38:1:1:0:26 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:19 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:11 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:20 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:41:0%:78:1E0:37:41:15:26:42 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:42 0/0:0:0:0:0:20:0%:36:1E0:41:20:16:4:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:20 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:34 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:25:0%:48:1E0:40:25:9:16:25 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:27:0%:52:1E0:36:27:16:11:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:23 0/0:0:0:0:0:55:0%:99:1E0:41:55:24:31:57 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:40:34:11:23:37 1/1:42:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:30 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:25 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:20 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:14 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:27 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:42 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:38 0/0:0:0:0:0:14:0%:25:1E0:43:14:9:5:14 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:28 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:26 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:25 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:39 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:31 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:50 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:24 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:27 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:45 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 0/0:0:0:0:0:14:0%:25:1E0:44:14:2:12:14 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:20 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:44 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:21 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:24 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:45 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:41 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:32 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:18 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:25 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:43 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:30 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:18 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:46 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:28 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:33 0/0:0:0:0:0:13:0%:25:1E0:38:13:8:5:13 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:34 0/0:0:0:0:0:27:0%:52:1E0:36:27:9:18:28 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:15 1/1:37:14:6:8:15:93.33%:76:2.4927E-8:0:0:0:0:16 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:24 0/0:38:1:1:0:25:4%:38:5E-1:39:24:8:16:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:31 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:35 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:19 1/1:34:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:26 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:21 0/0:0:0:0:0:48:0%:89:1E0:40:48:22:26:50 0/0:0:0:0:0:48:0%:89:1E0:39:48:18:30:52 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:19 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:33 1/1:38:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:35:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:26 1/1:37:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:22 0/0:0:0:0:0:31:0%:59:1E0:36:31:16:15:33 1/1:37:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:35 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:15 0/0:0:0:0:0:24:0%:44:1E0:36:24:8:16:24 0/0:0:0:0:0:43:0%:82:1E0:36:43:14:29:45 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:35 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:29 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:32 0/0:0:0:0:0:33:0%:63:1E0:37:33:18:15:36 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:19 MTB_anc 1030776 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|mntH_Rv0924c|gene947|transcript|Transcript_gene947|Coding|1/1|c.1089C>T|p.Thr363Thr|1089/1287|1089/1287|363/428||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1030776G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1030776G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:53:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:22:10:12:23:95.65%:99:4.7526E-13:0:0:0:0:24 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:38:10:28:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:53:15:38:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 1040706 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|pstS2_Rv0932c|gene955|transcript|Transcript_gene955|Coding|1/1|c.343G>T|p.Ala115Ser|343/1113|343/1113|115/370||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1040706C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1040706C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:18:13:5:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:46:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:61:26:35:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:43:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:37:37:17:20:38:97.37%:99:5.6582E-21:38:1:1:0:40 1/1:38:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 1042079 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|pstB_Rv0933|gene956|transcript|Transcript_gene956|Coding|1/1|c.816C>T|p.Ala272Ala|816/831|816/831|272/276||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1042079C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1042079C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:47 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:12 0/0:0:0:0:0:50:0%:92:1E0:42:50:32:18:51 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:28 0/0:0:0:0:0:38:0%:70:1E0:49:38:21:17:38 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:34:1:1:0:30:3.33%:44:5E-1:48:29:13:16:30 0/0:60:1:1:0:23:4.35%:34:5E-1:45:22:14:8:23 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:19 0/0:0:0:0:0:54:0%:99:1E0:44:54:31:23:55 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:22 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:37:0%:70:1E0:40:37:25:12:38 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:29:18:47 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:24 0/0:0:0:0:0:38:0%:70:1E0:47:38:27:11:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:67:0%:99:1E0:45:67:37:30:68 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:46 0/0:0:0:0:0:43:0%:82:1E0:45:43:28:15:43 0/0:0:0:0:0:47:0%:89:1E0:43:47:31:16:47 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:53 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:22 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:20 0/0:0:0:0:0:46:0%:85:1E0:39:46:22:24:47 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:48 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:48 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:30 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:29 0/0:37:1:0:1:33:3.03%:52:5E-1:44:32:20:12:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:17:0%:33:1E0:39:17:10:7:19 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:52:0%:96:1E0:46:52:21:31:53 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:50 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:54:0%:99:1E0:45:54:31:23:57 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:51:0%:97:1E0:45:51:34:17:51 0/0:0:0:0:0:16:0%:29:1E0:44:16:6:10:16 0/0:60:1:0:1:29:3.45%:45:5E-1:47:28:15:13:29 0/0:0:0:0:0:34:0%:62:1E0:49:34:14:20:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:43:0%:82:1E0:49:43:18:25:43 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:10:24:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:48:26:18:8:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:18:0%:32:1E0:46:18:7:11:18 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:48:0%:89:1E0:43:48:28:20:50 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:29 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:19 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:39:0%:74:1E0:45:39:27:12:39 0/0:38:1:1:0:29:3.45%:45:5E-1:41:28:17:11:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:29 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:37:0%:70:1E0:46:37:24:13:38 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:37 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:52 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:29 0/0:0:0:0:0:67:0%:99:1E0:41:67:31:36:68 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:57 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:41 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:41 0/0:0:0:0:0:57:0%:99:1E0:41:57:30:27:59 0/0:0:0:0:0:49:0%:93:1E0:38:49:22:27:49 0/0:0:0:0:0:54:0%:99:1E0:38:54:25:29:54 0/0:0:0:0:0:49:0%:93:1E0:40:49:28:21:49 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:0:0:0:0:41:0%:78:1E0:37:41:23:18:45 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:45 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:33 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:48 0/0:0:0:0:0:49:0%:93:1E0:40:49:24:25:49 0/0:0:0:0:0:46:0%:85:1E0:43:46:29:17:48 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:21 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:45 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:41 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:55 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:25 MTB_anc 1046015 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|mku_Rv0937c|gene960|transcript|Transcript_gene960|Coding|1/1|c.6A>C|p.Arg2Arg|6/822|6/822|2/273||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1046015T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1046015T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:53:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:29:13:16:30:96.67%:99:2.6212E-16:37:1:0:1:30 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:22:7:15:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:48:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:41:16:25:42:97.62%:99:2.5612E-23:38:1:1:0:43 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:16:11:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:52:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:54:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:52 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:60:29:31:61:98.36%:99:1.6176E-34:60:1:0:1:61 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:61:26:35:61:100%:99:2.609E-36:0:0:0:0:63 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:61:28:33:61:100%:99:2.609E-36:0:0:0:0:66 1/1:38:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:48:14:34:48:100%:99:1.554E-28:0:0:0:0:48 1/1:37:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:58:32:26:59:98.31%:99:2.4634E-33:34:1:0:1:60 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:34:18:16:35:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:46 MTB_anc 1046707 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|ligD_Rv0938|gene961|transcript|Transcript_gene961|Coding|1/1|c.572G>A|p.Gly191Glu|572/2280|572/2280|191/759||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1046707G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1046707G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:39:1:0:1:46:2.17%:73:5E-1:45:45:18:27:48 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:20 0/0:0:0:0:0:46:0%:85:1E0:46:46:24:22:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:23 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:23 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:35 0/0:0:0:0:0:46:0%:85:1E0:44:46:17:29:47 0/0:0:0:0:0:18:0%:32:1E0:49:18:4:14:18 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:19 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:22 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:29 0/0:0:0:0:0:50:0%:92:1E0:44:50:20:30:52 0/0:0:0:0:0:22:0%:40:1E0:46:22:7:15:22 0/0:0:0:0:0:40:0%:74:1E0:45:40:13:27:40 0/0:0:0:0:0:22:0%:40:1E0:40:22:5:17:22 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:6:14:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:43 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:21 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:9:24:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:52:0%:96:1E0:44:52:20:32:53 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:45 0/0:0:0:0:0:38:0%:70:1E0:42:38:11:27:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:37 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:21:0%:40:1E0:39:21:5:16:21 0/0:0:0:0:0:41:0%:78:1E0:41:41:14:27:41 0/0:0:0:0:0:38:0%:70:1E0:42:38:12:26:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:10:25:35 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:39 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:50 0/0:39:1:1:0:18:5.56%:24:5E-1:43:17:8:9:18 0/0:0:0:0:0:43:0%:82:1E0:47:43:29:14:43 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:47:0%:89:1E0:45:47:19:28:47 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:60:1:1:0:37:2.7%:59:5E-1:45:36:13:23:39 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:13:27:42 0/0:0:0:0:0:49:0%:93:1E0:43:49:21:28:49 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 0/0:0:0:0:0:48:0%:89:1E0:47:48:19:29:48 0/0:0:0:0:0:52:0%:96:1E0:45:52:21:31:52 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:27 0/0:39:1:0:1:37:2.7%:59:5E-1:43:36:12:24:37 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:19:0%:37:1E0:51:19:7:12:20 0/0:0:0:0:0:26:0%:47:1E0:50:26:12:14:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:8:19:27 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:16 0/0:0:0:0:0:26:0%:47:1E0:44:26:7:19:26 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:20 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:43 0/0:0:0:0:0:48:0%:89:1E0:40:48:20:28:49 0/0:0:0:0:0:38:0%:70:1E0:43:38:12:26:38 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:42:0%:77:1E0:47:42:18:24:42 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:37 0/0:0:0:0:0:22:0%:40:1E0:53:22:10:12:22 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:46 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:35 0/0:0:0:0:0:54:0%:99:1E0:42:54:25:29:55 0/0:0:0:0:0:31:0%:59:1E0:46:31:10:21:31 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:47:0%:89:1E0:45:47:17:30:49 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:40 0/0:0:0:0:0:18:0%:32:1E0:43:18:12:6:19 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:9:21:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:17 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:25 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:42 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:28 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:22 0/0:0:0:0:0:50:0%:92:1E0:45:50:21:29:50 0/0:0:0:0:0:67:0%:99:1E0:40:67:33:34:69 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:29 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:46:0%:85:1E0:37:46:18:28:46 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:35 0/0:0:0:0:0:47:0%:89:1E0:43:47:19:28:49 0/0:0:0:0:0:50:0%:92:1E0:39:50:26:24:53 0/0:0:0:0:0:47:0%:89:1E0:40:47:20:27:48 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 0/0:0:0:0:0:48:0%:89:1E0:39:48:18:30:49 0/0:0:0:0:0:44:0%:81:1E0:38:44:21:23:45 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:44 0/0:0:0:0:0:42:0%:77:1E0:39:42:21:21:44 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:10:22:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:32 0/0:0:0:0:0:66:0%:99:1E0:39:66:25:41:67 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:45 0/0:0:0:0:0:34:0%:62:1E0:41:34:7:27:34 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:30 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:22 0/0:0:0:0:0:33:0%:63:1E0:41:33:11:22:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:41 0/0:37:1:1:0:55:1.82%:91:5E-1:42:54:18:36:55 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:41 MTB_anc 1048539 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv0939_Rv0939|gene962|transcript|Transcript_gene962|Coding|1/1|c.128G>C|p.Arg43Pro|128/1935|128/1935|43/644||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1048539G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1048539G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:43:39:28:11:39 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:18 0/0:0:0:0:0:52:0%:96:1E0:44:52:23:29:53 0/0:0:0:0:0:23:0%:44:1E0:40:23:16:7:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:26:0%:47:1E0:48:26:16:10:26 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:22 0/0:0:0:0:0:43:0%:82:1E0:48:43:24:19:43 0/0:37:1:0:1:25:4%:38:5E-1:48:24:9:15:25 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:21 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:43 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:46 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:18:0%:32:1E0:39:18:10:8:18 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:31 0/0:0:0:0:0:57:0%:99:1E0:45:57:40:17:57 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:31:12:43 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:28 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:18:0%:32:1E0:44:18:14:4:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:26:7:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 0/0:0:0:0:0:53:0%:99:1E0:45:53:34:19:53 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:40 0/0:0:0:0:0:42:0%:77:1E0:42:42:28:14:44 0/0:0:0:0:0:38:0%:70:1E0:45:38:27:11:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:7:17:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:26 0/0:0:0:0:0:37:0%:70:1E0:47:37:14:23:38 0/0:0:0:0:0:50:0%:92:1E0:43:50:30:20:51 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:18:0%:32:1E0:47:18:7:11:18 0/0:0:0:0:0:49:0%:93:1E0:40:49:33:16:50 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:18 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:46 0/0:39:1:0:1:41:2.44%:66:5E-1:42:40:21:19:42 0/0:0:0:0:0:48:0%:89:1E0:42:48:28:20:48 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:42 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:53:0%:99:1E0:43:53:35:18:54 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/1:51:8:3:5:24:33.33%:27:1.949E-3:43:16:6:10:24 0/0:0:0:0:0:44:0%:81:1E0:39:44:30:14:44 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:42 0/0:0:0:0:0:56:0%:99:1E0:44:56:34:22:56 0/0:0:0:0:0:26:0%:47:1E0:48:26:17:9:27 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:49 0/0:0:0:0:0:29:0%:55:1E0:48:29:19:10:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:55:0%:99:1E0:44:55:35:20:56 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:32 0/0:0:0:0:0:23:0%:44:1E0:48:23:15:8:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:22:10:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:36 0/0:0:0:0:0:18:0%:32:1E0:43:18:13:5:18 0/0:0:0:0:0:33:0%:63:1E0:47:33:23:10:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:25 0/0:0:0:0:0:48:0%:89:1E0:47:48:28:20:48 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:54:0%:99:1E0:41:54:31:23:54 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:51:0%:97:1E0:42:51:32:19:52 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:18 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:31 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:18:0%:32:1E0:39:18:11:7:18 0/0:0:0:0:0:37:0%:70:1E0:42:37:24:13:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:28:6:35 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:37 0/0:0:0:0:0:64:0%:99:1E0:39:64:39:25:64 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:22:7:31 0/0:0:0:0:0:58:0%:99:1E0:43:58:36:22:58 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:49 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:48:0%:89:1E0:39:48:30:18:48 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:51 0/0:0:0:0:0:40:0%:74:1E0:38:40:18:22:40 0/0:0:0:0:0:35:0%:67:1E0:38:35:21:14:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:37 0/0:0:0:0:0:44:0%:81:1E0:38:44:29:15:45 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:41 0/0:0:0:0:0:32:0%:59:1E0:38:32:24:8:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:55:0%:99:1E0:37:55:38:17:55 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:46 0/0:0:0:0:0:47:0%:89:1E0:42:47:32:15:48 0/0:0:0:0:0:50:0%:92:1E0:38:50:33:17:50 0/0:0:0:0:0:48:0%:89:1E0:42:48:31:17:49 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:51 0/0:0:0:0:0:60:0%:99:1E0:41:60:36:24:61 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:34 MTB_anc 1050085 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv0939_Rv0939|gene962|transcript|Transcript_gene962|Coding|1/1|c.1674C>T|p.Thr558Thr|1674/1935|1674/1935|558/644||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1050085C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1050085C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:24:0%:44:1E0:48:24:6:18:24 0/0:0:0:0:0:50:0%:92:1E0:46:50:24:26:50 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:25 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:60:1:1:0:20:5%:27:5E-1:52:19:12:7:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:11:0%:22:1E0:49:11:5:6:11 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:45 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:46 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:39:0%:74:1E0:47:39:13:26:39 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:47 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:15 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:31:0%:59:1E0:48:31:11:20:31 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:9:21:30 0/0:0:0:0:0:33:0%:59:1E0:45:32:20:12:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:59:0%:99:1E0:47:59:30:29:60 0/0:0:0:0:0:44:0%:81:1E0:47:44:25:19:44 0/0:0:0:0:0:60:0%:99:1E0:45:60:30:30:61 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:37 0/0:0:0:0:0:49:0%:93:1E0:46:49:22:27:49 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:19 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:36 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:39:1:1:0:44:2.27%:69:5E-1:47:43:27:16:44 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:40 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:47 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:52 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:47 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:39:0%:74:1E0:50:39:26:13:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:36 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:46 0/0:0:0:0:0:35:0%:62:1E0:43:34:12:22:35 0/0:0:0:0:0:25:0%:48:1E0:50:25:13:12:25 0/0:0:0:0:0:39:0%:74:1E0:46:39:14:25:39 0/0:0:0:0:0:54:0%:99:1E0:45:54:33:21:55 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:50:0%:92:1E0:47:50:23:27:50 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:21:0%:40:1E0:52:21:11:10:21 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:31 0/0:0:0:0:0:24:0%:44:1E0:51:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:49:40:26:14:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:44 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:8:18:26 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:33:1:0:1:27:3.7%:41:5E-1:45:26:13:13:27 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:33 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:32:0%:59:1E0:46:32:22:10:32 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:48:38:17:21:38 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:33 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:52:0%:96:1E0:43:52:31:21:52 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:60:1:1:0:25:4%:38:5E-1:45:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:28 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:47 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:13:26:40 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:51 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 0/0:0:0:0:0:59:0%:99:1E0:42:59:28:31:59 0/0:0:0:0:0:62:0%:99:1E0:43:62:32:30:62 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:49 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:43 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:46 0/0:0:0:0:0:53:0%:99:1E0:40:53:26:27:54 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:48:0%:89:1E0:44:48:25:23:50 0/0:0:0:0:0:44:0%:81:1E0:38:44:16:28:45 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:71:0%:99:1E0:39:71:29:42:71 0/0:37:1:1:0:55:1.82%:91:5E-1:41:54:28:26:56 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:50:0%:92:1E0:40:50:25:25:50 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:14:0%:25:1E0:41:14:7:7:14 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:38 0/0:0:0:0:0:49:0%:93:1E0:40:49:22:27:49 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 MTB_anc 1051438 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0940c_Rv0940c|gene963|transcript|Transcript_gene963|Coding|1/1|c.22G>C|p.Ala8Pro|22/867|22/867|8/288||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1051438C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1051438C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:48:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:27:14:13:28:96.43%:99:3.7915E-15:39:1:0:1:28 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:47:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:48:25:23:49:97.96%:99:1.554E-28:0:0:0:0:50 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:36:16:20:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:51:28:23:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:55 1/1:41:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 MTB_anc 1054784 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0945_Rv0945|gene968|transcript|Transcript_gene968|Coding|1/1|c.538G>C|p.Gly180Arg|538/762|538/762|180/253||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1054784G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1054784G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:50:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:52:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:21:14:36:97.22%:99:8.3613E-20:60:1:0:1:36 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:51:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:30:19:11:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:23:10:13:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:55:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:16:12:29:96.55%:99:9.9776E-16:34:1:1:0:30 1/1:45:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:67:39:28:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:42:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:32:17:15:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 1063765 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|sucD_Rv0952|gene975|transcript|Transcript_gene975|Coding|1/1|c.626A>G|p.Lys209Arg|626/912|626/912|209/303||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1063765A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1063765A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:10:16:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:49:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:24:15:9:25:96%:99:3.101E-14:0:0:0:0:26 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:26:9:17:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:53:29:24:54:98.15%:99:1.5943E-31:0:0:0:0:55 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:51:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:33:17:16:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:27:17:10:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:35:19:16:36:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 1065588 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv0954_Rv0954|gene977|transcript|Transcript_gene977|Coding|1/1|c.462G>A|p.Val154Val|462/912|462/912|154/303||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1065588G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1065588G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:46:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:11:4:7:12:91.67%:53:4.8074E-6:39:1:0:1:12 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:28:14:14:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:61:26:35:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:29:10:19:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:33:20:13:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:46:26:20:47:97.87%:99:2.9526E-26:32:1:1:0:49 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:32:15:17:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:41:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 MTB_anc 1072092 . GCGT G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|disruptive_inframe_deletion|MODERATE|Rv0959_Rv0959|gene982|transcript|Transcript_gene982|Coding|1/1|c.839_841delCGT|p.Ala280_Leu281delinsVal|839/2019|839/2019|280/672||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1072093_1072095delCGT||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1072093_1072095delCGT||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:49 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:47 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:34:0%:62:1E0:50:34:15:19:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:52:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:52:26:8:18:26 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:49 0/0:0:0:0:0:18:0%:32:1E0:50:18:12:6:18 0/0:0:0:0:0:54:0%:99:1E0:45:54:29:25:55 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:25:0%:48:1E0:51:25:10:15:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:21 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:27 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:42 0/0:60:1:1:0:24:4.17%:34:5E-1:47:22:13:9:24 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:47 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:17:9:26 0/0:60:1:0:1:27:3.7%:41:5E-1:47:26:15:11:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:38:0%:70:1E0:46:38:23:15:38 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:45 0/0:0:0:0:0:77:0%:99:1E0:49:77:37:40:78 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:55:0%:99:1E0:43:55:24:31:55 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:60:1:1:0:41:2.44%:66:5E-1:46:40:24:16:41 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:55 0/0:0:0:0:0:49:0%:93:1E0:41:49:18:31:50 0/0:38:1:0:1:31:3.23%:48:5E-1:48:30:17:13:31 0/0:0:0:0:0:19:0%:37:1E0:51:19:10:9:19 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:54:0%:99:1E0:44:54:19:35:54 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:46 0/0:0:0:0:0:31:0%:59:1E0:52:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:42 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:51:0%:97:1E0:45:51:19:32:52 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:41 0/0:0:0:0:0:18:0%:32:1E0:48:18:7:11:19 0/0:0:0:0:0:15:0%:29:1E0:49:15:12:3:16 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 1/1:52:24:13:11:26:92.31%:99:7.6222E-13:60:2:1:1:26 0/0:0:0:0:0:12:0%:21:1E0:47:12:5:7:12 0/0:0:0:0:0:40:0%:74:1E0:50:40:13:27:40 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:38 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:9:21:30 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:53:0%:99:1E0:46:53:25:28:53 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:52 0/0:0:0:0:0:16:0%:29:1E0:48:16:11:5:16 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:5:23:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:21 0/0:60:1:1:0:25:4%:38:5E-1:41:24:11:13:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:63:0%:99:1E0:41:63:36:27:63 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:48:0%:89:1E0:41:48:22:26:48 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:43 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:31 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:32 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:32 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:21 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:19:0%:37:1E0:49:19:12:7:19 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:43 0/0:32:1:0:1:35:2.86%:55:5E-1:40:34:17:17:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:40 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:33 0/0:0:0:0:0:68:0%:99:1E0:42:68:33:35:69 0/0:0:0:0:0:52:0%:96:1E0:44:52:26:26:53 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:51:0%:97:1E0:40:51:22:29:51 0/0:0:0:0:0:42:0%:77:1E0:38:42:17:25:42 0/0:0:0:0:0:56:0%:99:1E0:41:56:25:31:57 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:38 0/0:0:0:0:0:49:0%:93:1E0:39:49:27:22:51 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:47 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:47 0/0:0:0:0:0:46:0%:85:1E0:38:46:26:20:48 0/0:0:0:0:0:40:0%:74:1E0:38:40:19:21:41 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:31 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:70:0%:99:1E0:38:70:30:40:70 0/0:0:0:0:0:56:0%:99:1E0:44:56:31:25:56 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:43 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:9:21:31 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:46 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:55:0%:99:1E0:45:55:23:32:55 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 MTB_anc 1072096 . T A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|stop_gained|HIGH|Rv0959_Rv0959|gene982|transcript|Transcript_gene982|Coding|1/1|c.842T>A|p.Leu281*|842/2019|842/2019|281/672||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1072096T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1072096T>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:48 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:47 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:34:0%:62:1E0:50:34:15:19:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:51:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:51:24:8:16:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:49 0/0:0:0:0:0:18:0%:32:1E0:50:18:12:6:18 0/0:0:0:0:0:53:0%:99:1E0:45:53:29:24:55 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:26:0%:47:1E0:50:26:10:16:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:40 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:24 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:40 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:17:9:26 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:23:16:39 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:47 0/0:0:0:0:0:78:0%:99:1E0:49:78:37:41:78 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:53:0%:99:1E0:43:53:22:31:54 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:42:0%:77:1E0:46:42:25:17:42 0/0:0:0:0:0:36:0%:66:1E0:49:36:20:16:36 0/0:0:0:0:0:56:0%:99:1E0:44:56:31:25:58 0/0:0:0:0:0:50:0%:92:1E0:42:50:18:32:50 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:34 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:52:0%:96:1E0:44:52:19:33:53 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:32:0%:59:1E0:52:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:41 0/0:0:0:0:0:42:0%:77:1E0:46:42:17:25:43 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:50:0%:92:1E0:46:50:20:30:51 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:43:0%:82:1E0:47:43:19:24:44 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:0:0:0:0:16:0%:29:1E0:49:16:12:4:16 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:40 0/1:52:24:13:11:27:88.89%:99:2.0853E-12:51:3:1:2:27 0/0:0:0:0:0:12:0%:21:1E0:47:12:5:7:12 0/0:0:0:0:0:41:0%:78:1E0:50:41:13:28:41 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:9:22:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:26 0/0:0:0:0:0:52:0%:96:1E0:46:52:25:27:53 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:51 0/0:0:0:0:0:15:0%:29:1E0:47:15:11:4:16 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:4:22:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:64:0%:99:1E0:42:64:38:26:64 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:49 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:46:0%:85:1E0:44:46:28:18:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:43 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:45 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:30 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:21 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:65:0%:99:1E0:43:65:32:33:67 0/0:0:0:0:0:52:0%:96:1E0:45:52:26:26:53 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:52:0%:96:1E0:41:52:23:29:52 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:42 0/0:0:0:0:0:58:0%:99:1E0:41:58:27:31:58 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:39 0/0:0:0:0:0:51:0%:97:1E0:40:51:27:24:52 0/0:0:0:0:0:48:0%:89:1E0:42:48:29:19:48 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:49 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:47 0/0:0:0:0:0:40:0%:74:1E0:38:40:20:20:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:71:0%:99:1E0:39:71:30:41:71 0/0:0:0:0:0:57:0%:99:1E0:44:57:33:24:57 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:43 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:32 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:45 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:56:0%:99:1E0:45:56:24:32:56 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 MTB_anc 1075951 . G T . PASS AC=1;AF=4.032e-03;AN=248;ANN=T|missense_variant|MODERATE|Rv0963c_Rv0963c|gene987|transcript|Transcript_gene987|Coding|1/1|c.147C>A|p.Asp49Glu|147/801|147/801|49/266||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1075951G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1075951G>T||||||;HOM=0;set=filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:30:3:2:1:14:21.43%:9:1.1111E-1:40:11:6:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:60:1:1:0:18:5.56%:24:5E-1:43:17:8:9:19 0/0:28:2:2:0:9:22.22%:7:2.3529E-1:50:7:3:4:10 0/0:31:2:1:1:15:13.33%:16:2.4138E-1:44:13:6:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:34:1:1:0:9:11.11%:11:5E-1:45:8:2:6:9 0/0:26:1:1:0:9:11.11%:11:5E-1:42:8:4:4:9 0/0:33:2:2:0:12:16.67%:10:2.3913E-1:45:10:4:6:12 0/0:32:2:2:0:12:16.67%:10:2.3913E-1:42:10:3:7:13 0/0:31:4:4:0:14:28.57%:6:4.8889E-2:49:10:2:8:15 0/0:31:2:2:0:12:16.67%:10:2.3913E-1:41:10:6:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:27:1:1:0:9:11.11%:11:5E-1:48:8:4:4:9 0/0:31:1:1:0:8:12.5%:8:5E-1:41:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:44:7:3:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:24:1:1:0:8:12.5%:8:5E-1:36:7:3:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:31:1:1:0:9:11.11%:11:5E-1:38:8:4:4:11 0/0:30:2:1:1:15:13.33%:16:2.4138E-1:37:13:5:8:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:44:10:3:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:9:0%:18:1E0:42:9:4:5:9 0/0:39:3:2:1:17:17.65%:14:1.1364E-1:41:14:8:6:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:31:1:1:0:15:6.67%:21:5E-1:41:14:9:5:15 0/0:30:1:1:0:8:12.5%:8:5E-1:43:7:1:6:8 0/0:30:2:2:0:11:18.18%:10:2.381E-1:57:9:6:3:11 0/0:34:1:0:1:8:12.5%:8:5E-1:36:7:6:1:9 0/0:32:2:1:1:19:10.53%:21:2.4324E-1:43:17:10:7:19 0/0:31:1:1:0:7:14.29%:8:5E-1:49:6:0:6:7 0/0:28:4:4:0:21:19.05%:15:5.3471E-2:43:17:8:9:21 0/0:34:1:1:0:18:5.56%:24:5E-1:45:17:13:4:18 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:16 0/0:29:2:2:0:11:18.18%:10:2.381E-1:46:9:2:7:12 0/0:32:1:1:0:12:8.33%:14:5E-1:38:11:2:9:12 0/0:39:3:3:0:10:30%:4:1.0526E-1:36:7:5:2:11 0/0:0:0:0:0:8:0%:14:1E0:42:8:2:6:8 0/0:25:1:1:0:10:10%:11:5E-1:38:9:6:3:11 0/0:28:2:2:0:11:18.18%:10:2.381E-1:44:9:4:5:11 0/0:24:1:1:0:11:9.09%:14:5E-1:44:10:6:4:11 0/0:33:2:2:0:9:22.22%:7:2.3529E-1:39:7:2:5:9 0/0:32:3:3:0:13:23.08%:9:1.1E-1:41:10:4:6:13 0/0:32:4:4:0:12:33.33%:4:4.6584E-2:34:8:5:3:12 0/0:0:0:0:0:14:0%:25:1E0:42:14:9:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:2:2:0:10:20%:7:2.3684E-1:48:8:4:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:26:1:1:0:11:9.09%:14:5E-1:40:10:3:7:11 0/0:34:1:1:0:15:6.67%:21:5E-1:39:14:8:6:15 0/0:30:3:3:0:9:33.33%:4:1.0294E-1:35:6:1:5:9 0/0:33:4:3:1:11:36.36%:4:4.5113E-2:42:7:3:4:11 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:15 0/0:31:2:2:0:15:13.33%:16:2.4138E-1:43:13:5:8:16 0/0:0:0:0:0:9:0%:18:1E0:41:9:4:5:11 0/0:26:1:1:0:12:8.33%:14:5E-1:42:11:6:5:12 0/0:28:3:3:0:11:27.27%:7:1.0714E-1:42:8:4:4:11 0/0:0:0:0:0:7:0%:14:1E0:50:7:3:4:8 0/0:28:2:2:0:16:12.5%:15:2.4194E-1:43:14:5:9:18 0/0:32:3:2:1:21:14.29%:19:1.1585E-1:45:18:7:11:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:45:11:4:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:31:1:1:0:7:14.29%:8:5E-1:40:6:4:2:7 0/0:0:0:0:0:12:0%:21:1E0:47:12:2:10:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:26:2:2:0:13:15.38%:13:2.4E-1:46:11:3:8:13 0/0:31:1:1:0:13:7.69%:18:5E-1:40:12:7:5:15 0/0:0:0:0:0:7:0%:14:1E0:38:7:5:2:7 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:14 0/0:35:1:1:0:9:11.11%:11:5E-1:41:8:4:4:9 0/0:24:2:2:0:13:15.38%:13:2.4E-1:43:11:7:4:13 0/0:0:0:0:0:8:0%:14:1E0:39:8:4:4:8 0/0:0:0:0:0:9:0%:18:1E0:40:9:6:3:10 0/0:26:1:1:0:15:6.67%:21:5E-1:42:14:3:11:15 0/0:29:2:2:0:11:18.18%:10:2.381E-1:41:9:5:4:11 0/0:32:1:1:0:11:9.09%:14:5E-1:48:10:3:7:11 0/0:31:2:2:0:10:20%:7:2.3684E-1:41:8:5:3:10 0/0:32:5:5:0:14:35.71%:4:2.037E-2:43:9:5:4:15 0/0:0:0:0:0:7:0%:14:1E0:45:7:2:5:7 0/0:31:1:1:0:8:12.5%:8:5E-1:38:7:6:1:11 0/0:0:0:0:0:13:0%:25:1E0:47:13:6:7:14 0/0:0:0:0:0:12:0%:21:1E0:48:12:4:8:12 0/0:0:0:0:0:16:0%:29:1E0:42:16:6:10:16 0/0:0:0:0:0:10:0%:17:1E0:40:10:5:5:11 0/0:28:3:3:0:24:12.5%:22:1.1702E-1:38:21:9:12:25 0/0:0:0:0:0:8:0%:14:1E0:38:8:5:3:8 0/0:0:0:0:0:15:0%:29:1E0:42:15:4:11:15 0/0:28:1:1:0:10:10%:11:5E-1:35:9:5:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:28:4:4:0:16:25%:8:5.0612E-2:40:12:7:5:16 0/0:33:5:5:0:14:35.71%:4:2.037E-2:39:9:3:6:15 0/0:34:1:1:0:14:7.14%:17:5E-1:41:13:7:6:14 0/0:33:1:0:1:8:12.5%:8:5E-1:48:7:1:6:8 0/0:0:0:0:0:13:0%:25:1E0:41:13:7:6:13 0/0:27:5:5:0:16:31.25%:6:2.1691E-2:42:11:7:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:9:0%:18:1E0:44:9:5:4:9 0/0:0:0:0:0:8:0%:14:1E0:51:8:4:4:8 0/0:32:3:3:0:13:23.08%:9:1.1E-1:45:10:5:5:13 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:14 0/0:35:1:1:0:9:11.11%:11:5E-1:46:8:4:4:9 0/0:0:0:0:0:10:0%:17:1E0:45:10:2:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:12 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:36:7:2:5:13 0/0:29:3:3:0:10:30%:4:1.0526E-1:36:7:3:4:10 0/0:32:2:2:0:13:15.38%:13:2.4E-1:41:11:4:7:14 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:14 0/0:35:2:2:0:9:22.22%:7:2.3529E-1:43:7:2:5:9 0/0:29:2:2:0:14:14.29%:12:2.4074E-1:37:12:7:5:15 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:14 0/0:29:2:2:0:9:22.22%:7:2.3529E-1:41:7:4:3:10 0/0:24:2:2:0:13:15.38%:13:2.4E-1:36:11:8:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:29:4:4:0:17:23.53%:11:5.132E-2:42:13:7:6:18 0/0:28:2:2:0:14:14.29%:12:2.4074E-1:35:12:6:6:16 0/0:30:5:4:1:15:33.33%:6:2.1073E-2:35:10:3:7:16 0/1:29:6:6:0:15:40%:20:8.4291E-3:41:9:2:7:16 0/0:35:1:1:0:9:11.11%:11:5E-1:38:8:3:5:11 0/0:32:3:3:0:19:15.79%:17:1.1486E-1:40:16:8:8:19 0/0:32:4:3:1:24:16.67%:18:5.461E-2:40:20:7:13:24 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:9 0/0:32:3:2:1:15:20%:11:1.1207E-1:35:12:3:9:15 0/0:24:1:1:0:9:11.11%:11:5E-1:37:8:3:5:10 0/0:32:1:0:1:10:10%:11:5E-1:40:9:3:6:11 0/0:31:5:5:0:21:23.81%:12:2.3921E-2:36:16:3:13:21 0/0:30:4:4:0:13:30.77%:6:4.7826E-2:46:9:4:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:26:2:2:0:19:10.53%:21:2.4324E-1:40:17:4:13:19 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:1:1:0:12:8.33%:14:5E-1:48:11:5:6:14 0/0:0:0:0:0:16:0%:29:1E0:49:16:8:8:16 0/0:33:4:4:0:19:21.05%:13:5.251E-2:37:15:7:8:21 0/0:34:1:1:0:8:12.5%:8:5E-1:41:7:4:3:8 0/0:0:0:0:0:13:0%:25:1E0:41:13:6:7:13 0/0:31:3:2:1:20:15%:16:1.1538E-1:41:17:8:9:20 0/0:29:4:4:0:23:17.39%:18:5.4264E-2:42:19:7:12:24 0/0:33:3:3:0:19:15.79%:17:1.1486E-1:40:16:7:9:20 MTB_anc 1079818 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|ctpV_Rv0969|gene993|transcript|Transcript_gene993|Coding|1/1|c.1076A>C|p.Glu359Ala|1076/2313|1076/2313|359/770||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1079818A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1079818A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:62:0%:99:1E0:41:62:31:31:65 0/0:0:0:0:0:17:0%:33:1E0:48:17:4:13:18 0/0:0:0:0:0:49:0%:93:1E0:42:49:29:20:51 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:20 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:23 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:19 0/0:0:0:0:0:43:0%:82:1E0:41:43:27:16:45 0/0:0:0:0:0:14:0%:25:1E0:47:14:7:7:14 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:23:9:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:8:19:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:30 0/0:0:0:0:0:18:0%:32:1E0:39:18:10:8:18 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:17 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:41 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:45 0/0:0:0:0:0:20:0%:36:1E0:40:20:14:6:21 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:18 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:39 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:34 0/0:0:0:0:0:51:0%:97:1E0:46:51:26:25:52 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:50 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:48 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:23 0/0:0:0:0:0:36:0%:66:1E0:39:36:12:24:37 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:42 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:35 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:14:6:22 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:44:0%:81:1E0:38:44:23:21:45 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:37 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:23 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:37 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:43 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:43 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:25 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:19 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:35 0/0:0:0:0:0:18:0%:32:1E0:46:18:7:11:19 0/0:0:0:0:0:15:0%:29:1E0:44:15:11:4:15 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:42 0/0:0:0:0:0:17:0%:33:1E0:43:17:5:12:18 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:43 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:41 0/0:0:0:0:0:54:0%:99:1E0:41:54:27:27:56 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:43 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:43 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:51 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:35 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:15 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:40 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:19 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:54:0%:99:1E0:38:54:33:21:57 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:32 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:23 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:30 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:31 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:34 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:32 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:21:0%:40:1E0:42:21:15:6:21 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:7:17:27 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:39 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:36:37:20:17:41 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:38 0/1:37:7:3:4:26:26.92%:23:4.9169E-3:37:19:12:7:26 0/1:42:26:15:11:66:39.39%:91:6.8388E-10:41:40:25:15:67 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:48 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:30 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:48 0/0:0:0:0:0:25:0%:48:1E0:37:25:18:7:28 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:33 0/0:0:0:0:0:33:0%:63:1E0:37:33:18:15:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:35 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:24 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:41 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:35 0/0:0:0:0:0:35:0%:67:1E0:37:35:22:13:38 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:33 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:30 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:49:0%:93:1E0:37:49:21:28:54 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:36 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:26 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:0:0:0:0:41:0%:78:1E0:41:41:27:14:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:40 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:40:0%:74:1E0:38:40:21:19:40 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:50 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 MTB_anc 1080192 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|ctpV_Rv0969|gene993|transcript|Transcript_gene993|Coding|1/1|c.1450A>G|p.Asn484Asp|1450/2313|1450/2313|484/770||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1080192A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1080192A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:17:17:35:97.14%:99:3.2089E-19:39:1:0:1:36 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:47:32:15:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:44:22:22:45:97.78%:99:3.8097E-26:0:0:0:0:46 1/1:45:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:47:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:52:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:31:17:14:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:50:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:16:19:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:42:21:21:43:97.67%:99:5.9562E-25:0:0:0:0:44 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:41:18:23:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:40:37:21:16:38:97.37%:99:5.7269E-22:0:0:0:0:40 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:35:14:21:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:28:16:12:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 1081555 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv0970_Rv0970|gene994|transcript|Transcript_gene994|Coding|1/1|c.504C>T|p.Phe168Phe|504/633|504/633|168/210||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1081555C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1081555C>T||||||;HOM=0;NC=0;set=filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:38:34:8:26:45 0/0:30:1:1:0:10:10%:11:5E-1:37:9:2:7:16 0/0:0:0:0:0:49:0%:93:1E0:37:49:17:32:62 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:24 0/0:36:1:1:0:18:5.56%:24:5E-1:35:17:6:11:24 0/0:30:1:1:0:24:4.17%:34:5E-1:37:23:10:13:29 0/0:37:1:1:0:28:3.57%:41:5E-1:36:27:12:15:35 0/0:32:1:1:0:22:4.55%:31:5E-1:37:21:10:11:27 0/0:0:0:0:0:19:0%:37:1E0:34:19:12:7:21 0/0:32:2:2:0:25:8%:31:2.449E-1:37:23:7:16:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:5:23:35 0/0:36:1:1:0:25:4%:38:5E-1:35:24:13:11:30 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:17 0/0:34:3:3:0:33:9.09%:37:1.1923E-1:36:30:10:20:40 0/0:29:3:3:0:19:15.79%:17:1.1486E-1:35:16:6:10:24 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:27 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:23 0/0:0:0:0:0:19:0%:37:1E0:36:19:4:15:23 0/0:0:0:0:0:19:0%:37:1E0:35:19:8:11:23 0/0:30:1:1:0:21:4.76%:31:5E-1:36:20:9:11:27 0/0:30:1:1:0:20:5%:27:5E-1:35:19:6:13:25 0/0:31:2:2:0:25:8%:31:2.449E-1:36:23:5:18:30 0/0:36:2:2:0:39:5.13%:54:2.4675E-1:37:37:8:29:46 0/0:32:1:1:0:24:4.17%:34:5E-1:35:23:8:15:32 0/0:20:1:1:0:25:4%:38:5E-1:38:24:11:13:30 0/0:0:0:0:0:19:0%:37:1E0:36:19:10:9:29 0/0:32:1:1:0:27:3.7%:41:5E-1:38:26:12:14:36 0/0:0:0:0:0:10:0%:17:1E0:38:10:4:6:11 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:20 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:25 0/0:32:1:1:0:26:3.85%:38:5E-1:37:25:8:17:35 0/0:34:1:1:0:20:5%:27:5E-1:36:19:9:10:29 0/0:30:1:1:0:27:3.7%:41:5E-1:37:26:6:20:35 0/0:0:0:0:0:20:0%:36:1E0:35:20:7:13:22 0/0:24:1:1:0:31:3.23%:48:5E-1:38:30:9:21:39 0/0:0:0:0:0:16:0%:29:1E0:39:16:5:11:22 0/0:0:0:0:0:22:0%:40:1E0:37:22:7:15:32 0/0:0:0:0:0:47:0%:89:1E0:36:47:14:33:59 0/0:32:1:1:0:45:2.22%:73:5E-1:37:44:15:29:53 0/0:0:0:0:0:23:0%:44:1E0:38:23:6:17:28 0/0:0:0:0:0:17:0%:33:1E0:36:17:6:11:22 0/0:36:1:1:0:29:3.45%:45:5E-1:36:28:10:18:40 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:28 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:34 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:24 0/0:34:1:1:0:29:3.45%:45:5E-1:37:28:9:19:34 0/0:0:0:0:0:22:0%:40:1E0:39:22:4:18:32 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:38 0/0:33:5:5:0:43:11.63%:41:2.764E-2:38:38:13:25:50 0/0:0:0:0:0:11:0%:22:1E0:36:11:2:9:13 0/0:0:0:0:0:26:0%:47:1E0:39:26:6:20:37 0/0:35:2:2:0:17:11.76%:18:2.4242E-1:37:15:3:12:21 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:40 0/0:30:1:1:0:17:5.88%:24:5E-1:38:16:6:10:23 0/0:36:1:1:0:31:3.23%:48:5E-1:38:30:8:22:38 0/0:27:1:1:0:18:5.56%:24:5E-1:38:17:8:9:23 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:28 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:35 0/0:32:2:2:0:34:5.88%:43:2.4627E-1:37:32:14:18:36 0/0:31:3:3:0:25:12%:25:1.1735E-1:37:22:10:12:29 0/0:0:0:0:0:30:0%:55:1E0:35:30:17:13:41 0/0:36:1:1:0:26:3.85%:38:5E-1:35:25:4:21:33 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:26 0/0:36:1:1:0:32:3.12%:48:5E-1:36:31:12:19:40 0/0:29:3:3:0:48:6.25%:59:1.2105E-1:38:45:15:30:58 0/0:0:0:0:0:22:0%:40:1E0:35:22:5:17:28 0/0:34:4:4:0:42:9.52%:43:5.801E-2:36:38:12:26:47 0/0:24:1:1:0:19:5.26%:28:5E-1:38:18:4:14:25 0/0:0:0:0:0:19:0%:37:1E0:35:19:8:11:27 0/0:28:2:2:0:25:8%:31:2.449E-1:36:23:9:14:33 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:38 0/0:36:1:1:0:15:6.67%:21:5E-1:37:14:6:8:23 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:37 0/0:0:0:0:0:23:0%:44:1E0:33:23:7:16:29 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:20 0/0:32:1:1:0:26:3.85%:38:5E-1:37:25:7:18:34 0/0:37:1:1:0:31:3.23%:48:5E-1:36:30:12:18:36 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:27 0/0:0:0:0:0:16:0%:29:1E0:38:16:3:13:25 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:26 0/0:0:0:0:0:29:0%:55:1E0:35:29:11:18:41 0/0:0:0:0:0:18:0%:32:1E0:40:18:1:17:24 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:27 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:23 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:29 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:19 0/0:32:1:1:0:18:5.56%:24:5E-1:38:17:4:13:24 0/0:0:0:0:0:35:0%:67:1E0:36:35:16:19:47 0/0:32:1:1:0:26:3.85%:38:5E-1:37:25:11:14:29 0/0:30:1:1:0:31:3.23%:48:5E-1:37:30:11:19:40 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:38 0/0:33:1:1:0:30:3.33%:44:5E-1:34:29:9:20:37 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:32 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:28 0/0:32:2:2:0:28:7.14%:34:2.4545E-1:36:26:10:16:35 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:35 0/0:31:3:3:0:34:8.82%:37:1.194E-1:38:31:9:22:38 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:28 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:28 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:23 0/0:34:1:1:0:22:4.55%:31:5E-1:36:21:6:15:29 0/0:30:2:2:0:29:6.9%:37:2.4561E-1:36:27:2:25:39 0/0:33:2:2:0:17:11.76%:18:2.4242E-1:37:15:6:9:23 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:22 0/0:0:0:0:0:23:0%:44:1E0:39:23:6:17:29 0/0:27:1:1:0:23:4.35%:34:5E-1:38:22:8:14:32 0/0:0:0:0:0:29:0%:55:1E0:36:29:14:15:37 0/0:0:0:0:0:26:0%:47:1E0:36:26:14:12:31 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:29 0/0:0:0:0:0:17:0%:33:1E0:37:17:11:6:21 0/0:0:0:0:0:16:0%:29:1E0:37:16:2:14:16 0/0:30:1:1:0:27:3.7%:41:5E-1:38:26:14:12:36 0/0:0:0:0:0:29:0%:55:1E0:38:29:7:22:39 0/0:30:2:2:0:33:6.06%:44:2.4615E-1:37:31:8:23:38 0/0:0:0:0:0:17:0%:33:1E0:36:17:3:14:20 0/0:34:2:2:0:30:6.67%:37:2.4576E-1:36:28:8:20:37 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:19 0/0:37:1:1:0:35:2.86%:55:5E-1:36:34:9:25:45 0/0:0:0:0:0:35:0%:67:1E0:37:35:10:25:43 0/0:34:1:1:0:39:2.56%:62:5E-1:38:38:14:24:45 0/0:33:4:4:0:30:13.33%:26:5.62E-2:35:26:5:21:33 0/0:31:2:2:0:40:5%:53:2.4684E-1:37:38:11:27:43 0/0:30:1:1:0:23:4.35%:34:5E-1:38:22:5:17:29 0/0:36:1:1:0:37:2.7%:59:5E-1:36:36:13:23:43 0/0:34:1:1:0:29:3.45%:45:5E-1:36:28:5:23:37 0/0:0:0:0:0:26:0%:47:1E0:37:26:6:20:33 0/0:30:3:3:0:22:13.64%:19:1.1628E-1:35:19:8:11:28 0/0:0:0:0:0:27:0%:52:1E0:37:27:5:22:30 0/0:31:2:2:0:21:9.52%:25:2.439E-1:36:19:5:14:25 0/0:0:0:0:0:27:0%:52:1E0:36:27:11:16:39 0/0:0:0:0:0:15:0%:29:1E0:35:15:4:11:22 0/0:34:2:2:0:26:7.69%:30:2.451E-1:36:24:6:18:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:29 0/0:27:1:1:0:21:4.76%:31:5E-1:38:20:8:12:25 0/0:33:2:2:0:37:5.41%:50:2.4658E-1:37:35:8:27:43 0/0:33:2:2:0:30:6.67%:37:2.4576E-1:38:28:13:15:37 0/0:33:1:1:0:31:3.23%:48:5E-1:38:30:9:21:42 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:38 0/0:0:0:0:0:30:0%:55:1E0:36:30:13:17:35 0/0:33:1:1:0:19:5.26%:28:5E-1:36:18:8:10:25 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:34 0/0:0:0:0:0:21:0%:40:1E0:35:21:12:9:25 0/0:27:1:1:0:22:4.55%:31:5E-1:36:21:5:16:26 0/0:34:1:1:0:16:6.25%:21:5E-1:35:15:9:6:18 0/0:33:2:2:0:27:7.41%:34:2.4528E-1:36:25:10:15:33 0/0:36:1:1:0:38:2.63%:58:5E-1:37:37:16:21:47 0/1:31:7:7:0:36:19.44%:22:5.6667E-3:37:29:8:21:40 0/0:0:0:0:0:32:0%:59:1E0:38:32:7:25:37 MTB_anc 1091253 . A G . PASS AC=294;AF=1.00;AN=294;ANN=G|missense_variant|MODERATE|PE_PGRS16_Rv0977|gene1001|transcript|Transcript_gene1001|Coding|1/1|c.881A>G|p.Asn294Ser|881/2772|881/2772|294/923||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1091253A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1091253A>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:36:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:33:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:11:7:4:12:91.67%:53:4.8074E-6:60:1:1:0:13 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:34:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:11:5:6:12:91.67%:58:1.4176E-6:0:0:0:0:13 1/1:37:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:39:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:34:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:15:6:9:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:36:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:24:11:13:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:36:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:34:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:34:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:15 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:33:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:32:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:35:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:18 MTB_anc 1091388 . ACGGCGGCGACGGCGGCCAGGGCGGCGCCGGCGGTAGTGGCGGCGTTGGCGGCGGCGGCGCAGGCGC A . PASS AC=45;AF=0.304;AN=148;ANN=A|inframe_deletion|MODERATE|PE_PGRS16_Rv0977|gene1001|transcript|Transcript_gene1001|Coding|1/1|c.1033_1098delCAGGGCGGCGCCGGCGGTAGTGGCGGCGTTGGCGGCGGCGGCGCAGGCGCCGGCGGCGACGGCGGC|p.Gln345_Gly366del|1033/2772|1033/2772|345/923||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1091389_1091454delCGGCGGCGACGGCGGCCAGGGCGGCGCCGGCGGTAGTGGCGGCGTTGGCGGCGGCGGCGCAGGCGC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1091389_1091454delCGGCGGCGACGGCGGCCAGGGCGGCGCCGGCGGTAGTGGCGGCGTTGGCGGCGGCGGCGCAGGCGC||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:36:5:1:4:12:41.67%:3:1.8634E-2:34:7:3:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:12:6:6:21:57.14%:45:2.658E-5:35:9:4:5:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:32:4:0:4:12:33.33%:4:4.6584E-2:34:8:2:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:7:1:6:10:70%:28:1.548E-3:34:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:2:4:12:50%:21:6.865E-3:37:6:3:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:35:3:1:2:10:30%:4:1.0526E-1:35:7:1:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:35:1:1:0:8:12.5%:8:5E-1:36:7:1:6:9 0/0:36:2:0:2:9:22.22%:7:2.3529E-1:36:7:0:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:28:3:1:2:8:33.33%:4:1.0294E-1:33:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:31:1:0:1:14:7.14%:17:5E-1:35:13:4:9:14 0/1:33:8:4:4:14:53.33%:29:1.0995E-3:37:7:1:6:15 0/1:40:6:4:2:12:50%:21:6.865E-3:35:6:4:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:9:4:5:15:60%:34:3.4983E-4:35:6:2:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:15:5:10:24:62.5%:59:1.196E-6:36:9:2:7:24 0/1:33:7:3:4:15:46.67%:25:3.1609E-3:37:8:2:6:16 0/1:35:6:1:5:10:60%:22:5.418E-3:36:4:0:4:10 0/1:31:6:1:5:7:75%:24:3.4965E-3:38:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:27:3:2:1:9:30%:4:1.0526E-1:35:7:2:5:12 0/0:32:4:1:3:13:30.77%:6:4.7826E-2:38:9:2:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:3:1:2:10:30%:4:1.0526E-1:36:7:2:5:10 0/0:36:4:0:4:11:36.36%:4:4.5113E-2:36:7:1:6:11 0/1:29:7:4:3:13:50%:25:2.8986E-3:36:7:2:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:5:3:2:14:35.71%:4:2.037E-2:36:9:5:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:6:3:3:9:60%:22:5.418E-3:36:4:1:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:5:2:3:13:38.46%:4:1.9565E-2:37:8:2:6:14 0/0:30:4:0:4:12:33.33%:4:4.6584E-2:36:8:1:7:12 0/0:37:5:3:2:13:38.46%:4:1.9565E-2:36:8:0:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:4:2:8:75%:24:3.4965E-3:38:2:1:1:9 0/1:32:8:5:3:15:50%:29:1.2236E-3:36:8:2:6:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:12:4:8:17:70.59%:49:1.1285E-5:37:5:2:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:34:8:1:7:17:47.06%:29:1.2236E-3:36:8:3:5:18 0/1:34:8:2:6:14:57.14%:30:9.6618E-4:34:6:2:4:15 0/1:35:6:5:1:15:40%:20:8.4291E-3:35:9:4:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:32:7:3:4:14:46.67%:25:3.1609E-3:38:8:5:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:3:0:3:11:27.27%:7:1.0714E-1:34:8:1:7:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:40:5:3:2:11:45.45%:3:1.7544E-2:37:6:1:5:11 0/1:35:7:3:4:14:50%:25:2.8986E-3:34:7:0:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:5:1:4:15:33.33%:6:2.1073E-2:35:10:3:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:31:1:0:1:7:14.29%:8:5E-1:37:6:0:6:7 0/1:36:7:3:4:9:77.78%:29:1.1312E-3:33:2:1:1:9 0/1:32:7:3:4:8:77.78%:29:1.1312E-3:36:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:33:1:1:0:7:14.29%:8:5E-1:37:6:3:3:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:9:2:7:14:56.25%:33:4.0786E-4:35:7:2:5:16 0/0:36:5:2:3:12:41.67%:3:1.8634E-2:36:7:2:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:34:6:2:4:15:40%:20:8.4291E-3:35:9:4:5:16 0/1:35:7:3:4:11:63.64%:27:1.935E-3:36:4:0:4:11 0/1:34:8:1:7:16:50%:29:1.2236E-3:36:8:5:3:18 0/1:36:6:2:4:11:54.55%:22:6.192E-3:34:5:3:2:11 0/1:36:8:2:6:15:53.33%:29:1.0995E-3:35:7:1:6:17 0/1:36:8:2:6:17:47.06%:28:1.3389E-3:36:9:1:8:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:3:0:3:9:33.33%:4:1.0294E-1:31:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:6:2:4:13:46.15%:21:7.4534E-3:36:7:4:3:13 0/1:35:7:2:5:17:41.18%:24:3.6151E-3:36:10:1:9:18 0/1:33:12:2:10:22:52.17%:44:3.4748E-5:36:11:6:5:23 0/1:31:9:4:5:14:60%:34:3.4983E-4:39:6:1:5:16 0/1:38:6:2:4:16:37.5%:20:8.837E-3:36:10:3:7:17 0/1:33:7:2:5:10:63.64%:27:1.935E-3:36:4:2:2:13 0/1:33:9:1:8:18:50%:32:5.1645E-4:36:9:4:5:18 0/0:35:5:0:5:11:45.45%:3:1.7544E-2:34:6:2:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:37:5:2:3:11:45.45%:3:1.7544E-2:35:6:3:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:30:2:2:0:9:22.22%:7:2.3529E-1:37:7:2:5:10 0/1:36:6:3:3:15:40%:20:8.4291E-3:35:9:2:7:16 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:34:6:0:6:9 0/1:36:7:2:5:13:53.85%:25:2.6087E-3:36:6:2:4:13 0/1:33:7:4:3:13:50%:25:2.8986E-3:36:7:2:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:29:6:0:6:12:50%:21:6.865E-3:35:6:2:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:31:5:1:4:10:45.45%:3:1.7544E-2:37:6:2:4:11 0/0:36:3:2:1:16:18.75%:11:1.129E-1:35:13:2:11:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:30:6:1:5:11:50%:21:6.865E-3:34:6:3:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:7:4:3:9:77.78%:29:1.1312E-3:38:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:6:2:4:9:66.67%:23:4.5249E-3:35:3:1:2:9 0/1:34:6:2:4:13:46.15%:21:7.4534E-3:37:7:3:4:13 0/1:37:10:3:7:13:76.92%:42:5.3843E-5:38:3:0:3:13 0/0:37:2:1:1:12:16.67%:10:2.3913E-1:37:10:1:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 MTB_anc 1092340 . C CG . PASS AC=298;AF=0.993;AN=300;ANN=CG|frameshift_variant|HIGH|PE_PGRS16_Rv0977|gene1001|transcript|Transcript_gene1001|Coding|1/1|c.1969dupG|p.Ala657fs|1970/2772|1970/2772|657/923||INFO_REALIGN_3_PRIME,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1092340_1092341insG||||||,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1092340_1092341insG||||||;LOF=(PE_PGRS16_Rv0977|gene1001|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:34:9:25:33:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:45:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:40:9:31:41:97.56%:99:9.8874E-23:32:1:1:0:41 1/1:42:9:2:7:10:90%:42:5.9538E-5:32:1:0:1:10 1/1:38:20:5:15:20:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:27:11:16:30:90%:99:4.6134E-14:32:3:0:3:30 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:24:11:13:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:34:14:20:33:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:40:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:27:10:17:24:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:25:5:20:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:37:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:20:3:17:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:18:4:14:18:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:37:22:6:16:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:35:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:21:5:16:22:95.45%:99:1.0931E-11:34:1:1:0:22 1/1:35:26:10:16:27:92.86%:99:5.6872E-14:36:2:0:2:28 1/1:37:21:5:16:20:95.45%:99:1.0931E-11:33:1:0:1:22 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:18:3:15:17:100%:99:1.1019E-10:0:0:0:0:18 0/1:40:21:5:16:23:87.5%:99:3.6437E-11:35:2:0:2:23 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:20:5:15:21:95.24%:99:4.0873E-11:36:1:0:1:21 1/1:36:27:6:21:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:41:23:8:15:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:26:10:16:26:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:40:23:3:20:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:31:7:24:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:37:11:26:37:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:41:26:9:17:27:96.3%:99:1.4382E-14:32:1:1:0:27 1/1:38:15:4:11:16:93.75%:75:2.8282E-8:34:1:0:1:16 1/1:35:21:6:15:21:95.45%:99:1.0931E-11:33:1:0:1:22 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:19:3:16:17:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:26:8:18:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:38:27:5:22:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:37:10:27:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:17:3:14:18:94.44%:86:2.0936E-9:38:1:1:0:18 1/1:44:19:13:6:20:95%:98:1.5234E-10:34:1:0:1:20 1/1:38:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:16:7:9:17:94.12%:81:7.7134E-9:36:1:1:0:17 1/1:39:13:7:6:14:92.86%:64:3.7391E-7:32:1:0:1:14 1/1:40:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:23:7:16:24:95.83%:99:7.7525E-13:34:1:1:0:24 1/1:36:26:9:17:25:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:38:22:6:16:22:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:31:15:16:32:96.88%:99:1.8007E-17:35:1:1:0:32 1/1:36:14:3:11:15:93.33%:69:1.0315E-7:36:1:1:0:15 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:20:3:17:21:95.24%:99:4.0873E-11:38:1:1:0:21 1/1:35:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:15:4:11:16:93.75%:75:2.8282E-8:34:1:0:1:16 1/1:39:26:7:19:27:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:39:22:7:15:24:91.67%:99:1.0078E-11:32:2:0:2:24 1/1:39:12:4:8:12:92.31%:58:1.3461E-6:29:1:0:1:13 1/1:38:21:9:12:22:95.45%:99:1.0931E-11:34:1:1:0:22 1/1:40:15:8:7:16:93.75%:75:2.8282E-8:32:1:0:1:16 1/1:39:29:3:26:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:13:3:10:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:34:9:25:36:94.44%:99:1.5887E-18:34:2:0:2:37 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:21:11:10:19:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:24:8:16:23:100%:99:3.101E-14:0:0:0:0:24 1/1:37:30:7:23:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:28:5:23:28:93.33%:99:4.194E-15:33:2:0:2:30 0/1:40:17:6:11:19:89.47%:82:5.9414E-9:33:2:0:2:19 1/1:36:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:21:9:12:20:95.45%:99:1.0931E-11:34:1:0:1:22 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:34:10:24:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:32:11:21:32:94.12%:99:2.2142E-17:34:2:0:2:34 1/1:40:36:7:29:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:37:13:24:39:94.87%:99:3.0128E-20:35:2:0:2:39 1/1:35:36:5:31:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:20:10:10:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:35:24:11:13:25:92.31%:99:7.6222E-13:33:2:1:1:27 1/1:36:28:4:24:29:93.33%:99:4.194E-15:36:2:1:1:30 1/1:36:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:12:6:6:13:92.31%:58:1.3461E-6:32:1:0:1:13 1/1:35:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:25:9:16:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:17:4:13:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:31:13:18:33:93.94%:99:8.2416E-17:32:2:2:0:33 1/1:39:20:4:16:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:34:18:4:14:19:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:35:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:26:6:20:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:24:10:14:25:92.31%:99:7.6222E-13:33:2:0:2:26 1/1:35:21:7:14:19:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:25:7:18:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:19:6:13:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:27:8:19:27:96.43%:99:5.1363E-16:0:0:0:0:27 1/1:36:31:13:18:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:17:3:14:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:29:8:21:30:93.55%:99:1.1344E-15:35:2:1:1:31 1/1:36:26:6:20:26:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:35:22:9:13:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:20:6:14:20:95.24%:99:4.0873E-11:29:1:0:1:21 1/1:34:22:6:16:21:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:22:6:16:22:95.65%:99:2.9149E-12:33:1:0:1:23 MTB_anc 1092642 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|PE_PGRS16_Rv0977|gene1001|transcript|Transcript_gene1001|Coding|1/1|c.2270T>G|p.Leu757Trp|2270/2772|2270/2772|757/923||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1092642T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1092642T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:44 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:60:0%:99:1E0:50:60:37:23:60 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:27 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:21 0/0:0:0:0:0:40:0%:74:1E0:50:40:22:18:41 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:49:36:19:17:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:27:0%:52:1E0:50:27:17:10:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:49 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:49:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:50:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:30 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:19 0/0:0:0:0:0:15:0%:29:1E0:44:15:10:5:15 0/0:0:0:0:0:40:0%:74:1E0:46:40:23:17:42 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:47 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:21 0/0:0:0:0:0:24:0%:44:1E0:49:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:51:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:25:0%:48:1E0:48:25:5:20:25 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:11:21:32 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:41 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:65:0%:99:1E0:47:65:37:28:65 0/0:0:0:0:0:49:0%:93:1E0:46:49:27:22:50 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:43 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:14:0%:25:1E0:49:14:7:7:15 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/1:47:12:6:6:24:50%:44:3.8815E-5:45:12:4:8:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:47 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:48:0%:89:1E0:47:48:25:23:48 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:34:0%:62:1E0:49:34:21:13:34 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:44 0/0:0:0:0:0:10:0%:17:1E0:50:10:6:4:10 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:16:35:52 0/0:0:0:0:0:22:0%:40:1E0:51:22:7:15:23 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:42:0%:77:1E0:49:42:24:18:43 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:43 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:47 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:31 0/0:0:0:0:0:31:0%:59:1E0:50:31:18:13:31 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:23 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:43 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:41:0%:78:1E0:45:41:15:26:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:34 0/0:0:0:0:0:27:0%:52:1E0:46:27:19:8:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:41 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:42 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:26:0%:47:1E0:45:26:18:8:26 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:32 0/0:0:0:0:0:46:0%:85:1E0:46:46:28:18:46 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:38 0/0:0:0:0:0:51:0%:97:1E0:40:51:29:22:52 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:59:0%:99:1E0:42:59:31:28:60 0/0:0:0:0:0:64:0%:99:1E0:43:64:31:33:65 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:51 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:40 0/0:0:0:0:0:48:0%:89:1E0:43:48:19:29:48 0/0:0:0:0:0:31:0%:59:1E0:38:31:11:20:34 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:51 0/0:0:0:0:0:51:0%:97:1E0:42:51:31:20:52 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:25:11:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:38 0/0:0:0:0:0:55:0%:99:1E0:39:55:29:26:57 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:51 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:44 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:49 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:47 0/0:60:1:0:1:28:3.57%:41:5E-1:47:27:16:11:28 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:37 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:49 0/0:0:0:0:0:58:0%:99:1E0:44:58:27:31:59 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:33 MTB_anc 1093731 . A C . PASS AC=112;AF=0.392;AN=286;ANN=C|missense_variant|MODERATE|PE_PGRS17_Rv0978c|gene1002|transcript|Transcript_gene1002|Coding|1/1|c.626T>G|p.Val209Gly|626/996|626/996|209/331||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1093731A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1093731A>C||||||;HET=0;set=filterInvariant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:24:23:1:24:100%:99:3.101E-14:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:24:0%:44:1E0:37:24:18:6:24 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:18:0%:32:1E0:36:18:16:2:21 0/0:0:0:0:0:12:0%:21:1E0:38:12:11:1:13 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:11:0%:22:1E0:39:11:10:1:12 1/1:38:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:14:0%:25:1E0:39:14:9:5:15 1/1:37:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:37:26:19:7:27:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:17:0%:33:1E0:38:17:13:4:17 0/0:0:0:0:0:16:0%:29:1E0:39:16:12:4:17 1/1:37:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:10 0/0:0:0:0:0:8:0%:14:1E0:38:8:6:2:9 0/0:0:0:0:0:24:0%:44:1E0:38:24:19:5:24 1/1:37:30:27:3:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:12:0%:21:1E0:38:12:11:1:12 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 0/0:0:0:0:0:17:0%:33:1E0:38:17:17:0:19 1/1:39:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:17:3:20 1/1:37:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:9:0%:18:1E0:35:9:8:1:11 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:18 1/1:37:10:7:3:11:90.91%:47:1.7011E-5:38:1:1:0:11 0/0:0:0:0:0:10:0%:17:1E0:42:10:6:4:11 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:10 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 0/0:0:0:0:0:14:0%:25:1E0:36:14:12:2:15 1/1:36:19:14:5:20:95%:98:1.5234E-10:33:1:1:0:20 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:22:0%:40:1E0:37:22:14:8:24 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:22:0%:40:1E0:39:22:16:6:22 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:19:0%:37:1E0:36:19:16:3:19 1/1:40:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:16:12:4:17:94.12%:81:7.7134E-9:39:1:1:0:17 1/1:36:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:9:0%:18:1E0:44:9:8:1:10 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:22:0%:40:1E0:38:22:19:3:22 1/1:39:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:9:0%:18:1E0:39:9:6:3:10 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:10 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:18 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:25 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:14 1/1:42:10:9:1:11:90.91%:47:1.7011E-5:39:1:1:0:11 1/1:47:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 0/0:33:1:0:1:11:9.09%:14:5E-1:37:10:6:4:12 1/1:43:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:27:0%:52:1E0:38:27:20:7:28 0/0:0:0:0:0:16:0%:29:1E0:37:16:14:2:17 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:16:0%:29:1E0:37:16:14:2:17 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:21:0%:40:1E0:36:21:13:8:22 1/1:37:28:24:4:29:96.55%:99:9.9776E-16:34:1:1:0:31 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:15 0/0:0:0:0:0:12:0%:21:1E0:38:12:11:1:12 0/0:0:0:0:0:20:0%:36:1E0:37:20:18:2:20 0/0:0:0:0:0:23:0%:44:1E0:37:23:20:3:25 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:12:0%:21:1E0:42:12:10:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:38:11:9:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:15:7:8:16:93.75%:75:2.8282E-8:39:1:1:0:18 1/1:38:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 ./. 0/0:0:0:0:0:9:0%:18:1E0:35:9:7:2:10 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:8 0/0:0:0:0:0:20:0%:36:1E0:36:20:18:2:22 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:15 0/0:0:0:0:0:15:0%:29:1E0:38:15:14:1:15 0/0:0:0:0:0:31:0%:59:1E0:37:31:25:6:31 0/0:0:0:0:0:26:0%:47:1E0:35:26:17:9:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:17:3:22 0/0:0:0:0:0:9:0%:18:1E0:36:9:7:2:10 0/0:0:0:0:0:17:0%:33:1E0:37:17:14:3:17 0/0:0:0:0:0:21:0%:40:1E0:37:21:17:4:21 0/0:0:0:0:0:21:0%:40:1E0:37:21:17:4:22 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:17 0/0:0:0:0:0:34:0%:62:1E0:37:34:29:5:34 0/0:0:0:0:0:18:0%:32:1E0:38:18:14:4:19 0/0:0:0:0:0:22:0%:40:1E0:37:22:19:3:22 0/0:0:0:0:0:13:0%:25:1E0:36:13:12:1:15 0/0:0:0:0:0:23:0%:44:1E0:36:23:19:4:24 0/0:0:0:0:0:20:0%:36:1E0:35:20:14:6:22 0/0:0:0:0:0:27:0%:52:1E0:36:27:23:4:28 0/0:0:0:0:0:28:0%:51:1E0:36:28:25:3:30 0/0:0:0:0:0:24:0%:44:1E0:35:24:18:6:28 0/0:0:0:0:0:17:0%:33:1E0:37:17:13:4:18 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:20 0/0:0:0:0:0:18:0%:32:1E0:36:18:15:3:19 0/0:0:0:0:0:20:0%:36:1E0:37:20:17:3:22 0/0:0:0:0:0:11:0%:22:1E0:36:11:11:0:13 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:19 0/0:0:0:0:0:16:0%:29:1E0:37:16:13:3:16 0/0:0:0:0:0:14:0%:25:1E0:35:14:11:3:15 0/0:0:0:0:0:8:0%:14:1E0:37:8:7:1:11 0/0:0:0:0:0:15:0%:29:1E0:36:15:12:3:16 0/0:0:0:0:0:16:0%:29:1E0:35:16:13:3:16 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:11 0/0:0:0:0:0:18:0%:32:1E0:35:18:13:5:18 0/0:0:0:0:0:18:0%:32:1E0:36:18:15:3:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:35:14:12:2:14 0/0:0:0:0:0:12:0%:21:1E0:38:12:7:5:14 0/0:0:0:0:0:14:0%:25:1E0:36:14:8:6:15 1/1:39:13:7:6:15:92.86%:64:3.7391E-7:37:1:1:0:16 1/1:41:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:13 0/0:0:0:0:0:18:0%:32:1E0:36:18:15:3:18 0/0:0:0:0:0:15:0%:29:1E0:37:15:14:1:16 0/0:0:0:0:0:14:0%:25:1E0:35:14:12:2:14 0/0:0:0:0:0:15:0%:29:1E0:37:15:12:3:16 0/0:0:0:0:0:14:0%:25:1E0:37:14:13:1:14 0/0:0:0:0:0:23:0%:44:1E0:36:23:18:5:23 0/0:0:0:0:0:32:0%:59:1E0:37:32:23:9:32 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 1093850 . C G . PASS AC=266;AF=0.993;AN=268;ANN=G|synonymous_variant|LOW|PE_PGRS17_Rv0978c|gene1002|transcript|Transcript_gene1002|Coding|1/1|c.507G>C|p.Gly169Gly|507/996|507/996|169/331||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1093850C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1093850C>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:33:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:13:3:10:14:92.86%:70:9.6148E-8:0:0:0:0:16 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:32:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:34:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:39:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:22 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 0/1:35:6:4:2:7:85.71%:29:1.0823E-3:0:0:0:0:8 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:32:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:14:4:10:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:33:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:32:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:41:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:33:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:33:18:11:7:19:94.74%:99:1.1019E-10:0:0:0:0:21 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:31:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:35:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:35:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 0/1:32:8:5:3:9:88.89%:41:7.77E-5:0:0:0:0:10 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:34:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 MTB_anc 1093928 . G A . PASS AC=46;AF=1.00;AN=46;ANN=A|synonymous_variant|LOW|PE_PGRS17_Rv0978c|gene1002|transcript|Transcript_gene1002|Coding|1/1|c.429C>T|p.Asn143Asn|429/996|429/996|143/331||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1093928G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1093928G>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:43:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:39:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:31:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:32:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 1094110 . C T . PASS AC=2;AF=0.500;AN=4;ANN=T|missense_variant|MODERATE|PE_PGRS17_Rv0978c|gene1002|transcript|Transcript_gene1002|Coding|1/1|c.247G>A|p.Gly83Ser|247/996|247/996|83/331||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1094110C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1094110C>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:37:8:5:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1094204 . C G . PASS AC=52;AF=1.00;AN=52;ANN=G|synonymous_variant|LOW|PE_PGRS17_Rv0978c|gene1002|transcript|Transcript_gene1002|Coding|1/1|c.153G>C|p.Ala51Ala|153/996|153/996|51/331||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1094204C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1094204C>G||||||;HET=0;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 1094413 . C G . PASS AC=258;AF=0.896;AN=288;ANN=G|intergenic_region|MODIFIER|PE_PGRS17_Rv0978c-Rv0979c_Rv0979c|gene1002-gene1003|intergenic_region|gene1002-gene1003|||n.1094413C>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:10:6:4:11:90.91%:47:1.7011E-5:38:1:0:1:11 1/1:43:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:11:6:5:12:91.67%:53:4.8074E-6:29:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:14:4:10:15:93.33%:69:1.0315E-7:38:1:0:1:15 1/1:43:11:6:5:12:91.67%:53:4.8074E-6:27:1:0:1:12 1/1:41:23:14:9:24:95.83%:99:7.7525E-13:38:1:0:1:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:17:9:8:18:94.44%:86:2.0936E-9:38:1:0:1:18 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:14:7:7:15:93.33%:69:1.0315E-7:38:1:0:1:15 0/1:40:6:6:0:9:66.67%:23:4.5249E-3:37:3:1:2:9 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:26:11:15:27:96.3%:99:1.4382E-14:38:1:0:1:28 1/1:48:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:42:15:11:4:17:88.24%:71:7.3277E-8:38:2:0:2:17 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:49:13:8:5:14:92.86%:64:3.7391E-7:37:1:1:0:14 1/1:35:10:7:3:11:90.91%:47:1.7011E-5:27:1:0:1:11 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:48:14:9:5:16:87.5%:65:2.5454E-7:48:2:0:2:16 0/1:40:16:10:6:18:88.89%:76:2.0936E-8:38:2:2:0:18 1/1:50:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:13:6:7:14:92.86%:64:3.7391E-7:38:1:0:1:14 0/1:48:23:12:11:26:88.46%:99:7.3681E-12:34:3:0:3:26 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 0/1:45:16:9:7:18:88.89%:76:2.0936E-8:38:2:0:2:19 1/1:41:12:5:7:13:92.31%:58:1.3461E-6:30:1:0:1:14 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:44:9:5:4:10:90%:42:5.9538E-5:34:1:0:1:11 0/1:44:17:9:8:19:89.47%:82:5.9414E-9:56:2:1:1:20 1/1:41:22:12:10:23:95.65%:99:2.9149E-12:36:1:0:1:23 0/1:41:11:7:4:13:84.62%:49:1.0096E-5:38:2:1:1:13 1/1:43:13:5:8:14:92.86%:64:3.7391E-7:38:1:0:1:14 1/1:41:23:12:11:24:95.83%:99:7.7525E-13:34:1:0:1:27 0/1:46:14:7:7:17:82.35%:63:4.8851E-7:37:3:1:2:17 1/1:44:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 0/1:38:8:3:5:9:88.89%:36:2.0568E-4:31:1:0:1:10 1/1:38:18:10:8:20:90%:87:1.6758E-9:36:2:1:1:20 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:23:8:15:25:92%:99:7.7525E-13:60:1:1:0:26 0/1:40:15:7:8:17:88.24%:71:7.3277E-8:34:2:0:2:17 1/1:40:13:8:5:14:92.86%:64:3.7391E-7:32:1:0:1:14 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:13:6:7:14:92.86%:64:3.7391E-7:38:1:0:1:16 1/1:44:13:5:8:14:92.86%:64:3.7391E-7:36:1:0:1:15 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:24:15:9:25:96%:99:2.0568E-13:37:1:0:1:27 1/1:43:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 0/1:44:14:12:2:16:87.5%:65:2.5454E-7:49:2:0:2:18 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:47:12:5:7:13:92.31%:58:1.3461E-6:39:1:1:0:13 0/1:49:15:9:6:17:88.24%:71:7.3277E-8:38:2:0:2:17 1/1:48:9:5:4:10:90%:42:5.9538E-5:37:1:1:0:11 1/1:46:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 0/1:41:16:10:6:18:88.89%:81:7.7134E-9:52:1:1:0:19 0/1:41:13:8:5:15:86.67%:60:8.7675E-7:34:2:0:2:15 0/1:39:8:7:1:9:88.89%:36:2.0568E-4:38:1:0:1:9 1/1:44:21:8:13:22:95.45%:99:1.0931E-11:38:1:0:1:22 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 0/1:44:16:11:5:21:76.19%:71:7.7086E-8:35:4:0:4:22 0/1:44:8:5:3:10:80%:34:3.5723E-4:34:2:0:2:10 1/1:41:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:42:16:9:7:20:80%:71:7.7086E-8:41:4:0:4:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:48:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:16:8:8:17:94.12%:87:1.6637E-9:0:0:0:0:17 0/1:50:8:4:4:9:88.89%:36:2.0568E-4:38:1:0:1:9 1/1:39:23:14:9:24:95.83%:99:7.7525E-13:38:1:0:1:25 1/1:44:9:7:2:10:90%:42:5.9538E-5:38:1:0:1:10 1/1:39:26:15:11:27:96.3%:99:1.4382E-14:34:1:0:1:28 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:39:16:13:3:18:88.89%:76:2.0936E-8:35:2:1:1:18 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 0/1:38:22:14:8:27:81.48%:99:1.0343E-10:34:5:0:5:29 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:44:16:5:11:18:88.89%:76:2.0936E-8:38:2:0:2:18 1/1:46:13:6:7:14:92.86%:64:3.7391E-7:33:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:16:8:8:18:88.89%:76:2.0936E-8:34:2:0:2:18 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 0/1:40:15:8:7:17:88.24%:71:7.3277E-8:36:2:0:2:17 1/1:46:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:41:9:6:3:12:75%:37:1.6826E-4:38:3:0:3:13 1/1:39:22:11:11:23:95.65%:99:2.9149E-12:32:1:0:1:23 1/1:42:17:6:11:18:94.44%:86:2.0936E-9:35:1:0:1:18 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:16:10:6:17:94.12%:81:7.7134E-9:34:1:0:1:19 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 0/1:44:13:8:5:15:86.67%:60:8.7675E-7:35:2:0:2:16 1/1:42:30:13:17:32:93.75%:99:3.0612E-16:38:2:0:2:33 1/1:41:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:24:17:7:25:96%:99:2.0568E-13:34:1:0:1:25 0/1:38:20:13:7:24:83.33%:91:6.3493E-10:35:4:0:4:24 0/1:38:23:15:8:26:88.46%:99:7.3681E-12:35:3:0:3:27 1/1:39:28:19:9:31:90.32%:99:1.2857E-14:38:3:0:3:33 0/1:38:24:11:13:27:88.89%:99:2.0853E-12:37:3:0:3:27 1/1:38:18:11:7:19:94.74%:92:5.6585E-10:34:1:0:1:20 1/1:41:20:13:7:21:95.24%:99:4.0873E-11:36:1:0:1:21 1/1:40:16:8:8:17:94.12%:81:7.7134E-9:37:1:0:1:21 1/1:37:17:6:11:18:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:43:22:10:12:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:41:16:10:6:17:94.12%:81:7.7134E-9:36:1:0:1:17 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:28:16:12:30:93.33%:99:4.194E-15:36:2:0:2:31 1/1:39:19:11:8:21:90.48%:93:4.7003E-10:36:2:0:2:21 1/1:40:24:15:9:25:96%:99:2.0568E-13:38:1:0:1:25 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:28:13:15:29:96.55%:99:9.9776E-16:38:1:0:1:29 1/1:42:13:9:4:14:92.86%:64:3.7391E-7:38:1:0:1:14 1/1:44:20:17:3:21:95.24%:99:4.0873E-11:38:1:0:1:23 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:18:12:6:19:94.74%:92:5.6585E-10:36:1:0:1:19 1/1:44:18:9:9:19:94.74%:92:5.6585E-10:60:1:0:1:19 1/1:37:21:8:13:22:95.45%:99:1.0931E-11:38:1:0:1:22 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:20:10:10:22:90.91%:98:1.3117E-10:36:2:1:1:22 1/1:41:16:10:6:17:94.12%:81:7.7134E-9:38:1:0:1:17 MTB_anc 1094415 . T C . PASS AC=260;AF=0.903;AN=288;ANN=C|intergenic_region|MODIFIER|PE_PGRS17_Rv0978c-Rv0979c_Rv0979c|gene1002-gene1003|intergenic_region|gene1002-gene1003|||n.1094415T>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:10:6:4:11:90.91%:47:1.7011E-5:36:1:0:1:11 1/1:43:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:13:4:9:14:92.86%:64:3.7391E-7:31:1:0:1:15 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:24:15:9:25:96%:99:2.0568E-13:38:1:0:1:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:17:9:8:18:94.44%:86:2.0936E-9:27:1:0:1:18 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:45:12:5:7:13:92.31%:58:1.3461E-6:37:1:0:1:14 0/1:40:6:6:0:9:66.67%:23:4.5249E-3:36:3:1:2:9 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:28:13:15:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:42:15:11:4:17:88.24%:71:7.3277E-8:36:2:0:2:17 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:49:13:8:5:14:92.86%:64:3.7391E-7:37:1:1:0:14 0/1:37:9:6:3:11:81.82%:39:1.1057E-4:35:2:1:1:11 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 0/1:48:14:9:5:16:87.5%:65:2.5454E-7:47:2:0:2:16 0/1:40:16:10:6:18:88.89%:76:2.0936E-8:37:2:2:0:18 1/1:50:10:2:8:11:90.91%:47:1.7011E-5:34:1:0:1:11 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:13:6:7:14:92.86%:64:3.7391E-7:38:1:0:1:14 0/1:47:25:13:12:28:89.29%:99:5.8768E-13:35:3:0:3:28 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 0/1:44:17:9:8:19:89.47%:82:5.9414E-9:36:2:0:2:19 1/1:40:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:10:6:4:11:90.91%:47:1.7011E-5:38:1:0:1:11 1/1:43:18:9:9:20:90%:87:1.6758E-9:53:2:1:1:21 1/1:42:22:12:10:23:95.65%:99:2.9149E-12:37:1:0:1:23 0/1:39:12:7:5:14:85.71%:55:2.9913E-6:32:2:1:1:14 1/1:43:13:5:8:14:92.86%:64:3.7391E-7:34:1:0:1:14 1/1:40:26:14:12:27:96.3%:99:1.4382E-14:38:1:0:1:27 0/1:47:14:7:7:17:82.35%:63:4.8851E-7:35:3:1:2:17 1/1:47:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:23:11:12:24:95.83%:99:7.7525E-13:31:1:0:1:25 1/1:38:9:4:5:10:90%:42:5.9538E-5:37:1:0:1:10 1/1:38:18:10:8:20:90%:87:1.6758E-9:35:2:1:1:20 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:25:8:17:26:96.15%:99:5.4444E-14:60:1:1:0:27 0/1:40:15:7:8:17:88.24%:71:7.3277E-8:34:2:0:2:17 1/1:40:13:8:5:14:92.86%:64:3.7391E-7:32:1:0:1:14 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:40:14:6:8:16:87.5%:65:2.5454E-7:32:2:0:2:16 1/1:44:14:6:8:15:93.33%:69:1.0315E-7:36:1:0:1:16 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:51:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:26:16:10:27:96.3%:99:1.4382E-14:37:1:0:1:27 1/1:43:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 0/1:42:17:15:2:19:89.47%:82:5.9414E-9:49:2:0:2:19 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:12:5:7:13:92.31%:58:1.3461E-6:36:1:1:0:13 0/1:48:16:10:6:18:88.89%:76:2.0936E-8:38:2:0:2:18 1/1:49:9:5:4:10:90%:42:5.9538E-5:36:1:1:0:11 1/1:47:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 0/1:41:16:10:6:18:88.89%:76:2.0936E-8:43:2:1:1:19 0/1:40:13:8:5:15:86.67%:60:8.7675E-7:34:2:0:2:15 0/1:39:8:7:1:9:88.89%:36:2.0568E-4:38:1:0:1:9 1/1:44:21:8:13:22:95.45%:99:1.0931E-11:30:1:0:1:22 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 0/1:42:19:12:7:23:82.61%:86:2.1316E-9:32:4:0:4:23 0/1:45:8:5:3:10:80%:34:3.5723E-4:37:2:0:2:10 1/1:40:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 0/1:41:17:9:8:21:80.95%:76:2.3502E-8:38:4:0:4:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:47:17:12:5:18:94.44%:86:2.0936E-9:31:1:0:1:18 1/1:48:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:51:8:4:4:9:88.89%:36:2.0568E-4:38:1:0:1:9 1/1:39:23:14:9:24:95.83%:99:7.7525E-13:30:1:0:1:25 1/1:44:9:7:2:10:90%:42:5.9538E-5:38:1:0:1:10 1/1:39:27:16:11:28:96.43%:99:3.7915E-15:38:1:0:1:28 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:16:13:3:17:94.12%:81:7.7134E-9:37:1:1:0:18 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 0/1:37:26:16:10:31:83.87%:99:8.0999E-13:37:5:0:5:31 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:43:16:5:11:18:88.89%:76:2.0936E-8:36:2:0:2:19 1/1:42:15:6:9:16:93.75%:75:2.8282E-8:38:1:0:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:16:8:8:17:94.12%:81:7.7134E-9:38:1:0:1:18 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 0/1:41:15:8:7:17:88.24%:71:7.3277E-8:32:2:0:2:17 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 0/1:40:10:7:3:13:76.92%:42:5.3843E-5:38:3:0:3:13 1/1:42:22:11:11:23:95.65%:99:2.9149E-12:27:1:0:1:23 1/1:41:18:7:11:19:94.74%:92:5.6585E-10:30:1:0:1:19 1/1:41:22:9:13:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:35:17:11:6:18:94.44%:86:2.0936E-9:38:1:0:1:19 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 0/1:44:12:7:5:14:85.71%:55:2.9913E-6:36:2:0:2:15 1/1:42:30:12:18:31:96.77%:99:6.8754E-17:38:1:0:1:32 1/1:42:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:26:17:9:27:96.3%:99:1.4382E-14:38:1:0:1:28 0/1:40:20:13:7:23:86.96%:95:3.1579E-10:34:3:0:3:24 0/1:38:20:14:6:23:86.96%:95:3.1579E-10:35:3:0:3:27 1/1:39:29:18:11:32:90.62%:99:3.5714E-15:38:3:0:3:32 0/1:38:25:11:14:28:89.29%:99:5.8768E-13:35:3:0:3:28 1/1:37:19:11:8:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:15:6:9:16:93.75%:75:2.8282E-8:34:1:0:1:18 1/1:43:20:9:11:21:95.24%:99:4.0873E-11:38:1:0:1:23 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:30:17:13:31:96.77%:99:6.8754E-17:38:1:0:1:33 1/1:39:19:11:8:21:90.48%:93:4.7003E-10:37:2:0:2:21 1/1:41:24:15:9:25:96%:99:2.0568E-13:36:1:0:1:25 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:13:15:29:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:42:13:9:4:14:92.86%:64:3.7391E-7:38:1:0:1:14 1/1:43:20:17:3:21:95.24%:99:4.0873E-11:38:1:0:1:22 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:45:18:9:9:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:38:20:8:12:21:95.24%:99:4.0873E-11:31:1:0:1:22 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:10:11:23:91.3%:99:3.6437E-11:36:2:1:1:23 1/1:42:16:9:7:17:94.12%:81:7.7134E-9:38:1:0:1:18 MTB_anc 1095669 . A G . PASS AC=228;AF=1.00;AN=228;ANN=G|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.783T>C|p.Gly261Gly|783/1374|783/1374|261/457||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1095669A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1095669A>G||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:33:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:9:8:1:10:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:11 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:13:5:8:14:92.86%:70:9.6148E-8:0:0:0:0:15 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:33:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:40:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:13:11:2:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:33:8:6:2:8:100%:41:7.77E-5:0:0:0:0:11 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:34:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:33:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:8:7:1:8:100%:41:7.77E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:31:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:12:0:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:33:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 MTB_anc 1095672 . C G . PASS AC=236;AF=1.00;AN=236;ANN=G|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.780G>C|p.Gly260Gly|780/1374|780/1374|260/457||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1095672C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1095672C>G||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:10:8:2:11:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:6:8:15:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:42:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:11:2:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:33:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:34:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 MTB_anc 1095678 . G A . PASS AC=248;AF=1.00;AN=248;ANN=A|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.774C>T|p.Gly258Gly|774/1374|774/1374|258/457||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1095678G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1095678G>A||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:32:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:9:4:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:16:6:10:17:100%:87:1.6637E-9:0:0:0:0:17 1/1:32:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:11:2:14:92.86%:64:3.7391E-7:60:1:1:0:14 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:34:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:15 1/1:34:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 MTB_anc 1095942 . A G . PASS AC=274;AF=1.00;AN=274;ANN=G|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.510T>C|p.Ala170Ala|510/1374|510/1374|170/457||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1095942A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1095942A>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:40:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:42:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:15 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:13:10:3:14:92.86%:64:3.7391E-7:37:1:1:0:14 1/1:35:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:11:8:3:12:91.67%:53:4.8074E-6:37:1:1:0:13 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 MTB_anc 1095944 . C T . PASS AC=262;AF=1.00;AN=262;ANN=T|missense_variant|MODERATE|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.508G>A|p.Ala170Thr|508/1374|508/1374|170/457||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1095944C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1095944C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:32:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:33:8:7:1:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:43:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:11 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:31:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:32:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:33:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:34:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:33:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:33:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:32:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:33:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:15 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:33:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:17 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:31:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:32:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:32:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:32:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:30:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 MTB_anc 1095945 . T G . PASS AC=270;AF=1.00;AN=270;ANN=G|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.507A>C|p.Gly169Gly|507/1374|507/1374|169/457||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1095945T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1095945T>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:32:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:33:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:40:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:32:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:17:8:9:18:94.44%:86:2.0936E-9:37:1:1:0:19 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:32:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:33:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:33:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:33:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:32:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:33:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:32:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:32:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:33:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:32:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:32:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:31:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 MTB_anc 1095990 . C G . PASS AC=146;AF=0.936;AN=156;ANN=G|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.462G>C|p.Gly154Gly|462/1374|462/1374|154/457||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1095990C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1095990C>G||||||;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:32:9:7:2:10:90%:42:5.9538E-5:34:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:32:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:8:5:3:9:88.89%:36:2.0568E-4:32:1:0:1:10 1/1:33:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:32:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:32:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 0/1:34:7:5:2:8:87.5%:31:6.993E-4:38:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:33:7:5:2:8:87.5%:35:2.9138E-4:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:32:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 0/1:34:7:7:0:8:87.5%:31:6.993E-4:34:1:0:1:9 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 0/1:33:8:6:2:9:88.89%:36:2.0568E-4:36:1:0:1:10 0/1:34:8:7:1:9:88.89%:36:2.0568E-4:37:1:1:0:12 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:32:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:33:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 0/1:35:8:6:2:9:88.89%:36:2.0568E-4:34:1:1:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:33:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:31:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:11:7:4:12:91.67%:53:4.8074E-6:32:1:0:1:14 0/1:32:7:5:2:8:87.5%:31:6.993E-4:36:1:0:1:9 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:11:7:4:12:91.67%:53:4.8074E-6:38:1:0:1:13 0/1:40:6:3:3:7:85.71%:26:2.331E-3:30:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:30:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:6:3:3:8:75%:24:3.4965E-3:37:2:0:2:10 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 1096002 . C T . PASS AC=105;AF=0.921;AN=114;ANN=T|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.450G>A|p.Gly150Gly|450/1374|450/1374|150/457||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1096002C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1096002C>T||||||;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:34:6:4:2:7:85.71%:26:2.331E-3:31:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:8:3:12:91.67%:53:4.8074E-6:38:1:0:1:12 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:7:6:1:8:87.5%:31:6.993E-4:33:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:8:8:0:9:88.89%:36:2.0568E-4:33:1:0:1:9 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:40:6:5:1:7:85.71%:26:2.331E-3:38:1:0:1:9 1/1:33:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:6:6:0:7:85.71%:26:2.331E-3:33:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:7:2:10:100%:46:2.0568E-5:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:6:3:3:7:85.71%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:12:11:1:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:6:4:2:7:85.71%:26:2.331E-3:32:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:32:7:7:0:8:87.5%:31:6.993E-4:34:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:6:4:2:9:66.67%:23:4.5249E-3:34:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 1096023 . G A . PASS AC=20;AF=1.00;AN=20;ANN=A|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.429C>T|p.Asn143Asn|429/1374|429/1374|143/457||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1096023G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1096023G>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 1096299 . C G . PASS AC=139;AF=0.993;AN=140;ANN=G|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.153G>C|p.Ala51Ala|153/1374|153/1374|51/457||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1096299C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1096299C>G||||||;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:32:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:12:8:4:13:92.31%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:20:19:1:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:8:1:10:90%:42:5.9538E-5:49:1:0:1:10 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:8:7:1:9:88.89%:36:2.0568E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:13:11:2:14:92.86%:64:3.7391E-7:37:1:1:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 1096323 . G T . PASS AC=126;AF=1.00;AN=126;ANN=T|missense_variant|MODERATE|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.129C>A|p.His43Gln|129/1374|129/1374|43/457||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1096323G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1096323G>T||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 ./. 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:21:20:1:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:8:2:11:90.91%:47:1.7011E-5:60:1:0:1:11 1/1:37:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:9:8:1:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 MTB_anc 1096398 . C T . PASS AC=180;AF=1.00;AN=180;ANN=T|synonymous_variant|LOW|PE_PGRS18_Rv0980c|gene1005|transcript|Transcript_gene1005|Coding|1/1|c.54G>A|p.Ala18Ala|54/1374|54/1374|18/457||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1096398C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1096398C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 ./. 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 ./. 1/1:35:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:15:5:10:16:93.75%:75:2.8282E-8:38:1:0:1:16 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:11:7:4:12:91.67%:53:4.8074E-6:37:1:1:0:14 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:6:4:11:90.91%:47:1.7011E-5:37:1:1:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 MTB_anc 1096567 . A G . PASS AC=296;AF=0.993;AN=298;ANN=G|intergenic_region|MODIFIER|PE_PGRS18_Rv0980c-mprA_Rv0981|gene1005-gene1006|intergenic_region|gene1005-gene1006|||n.1096567A>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:29:12:17:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:44:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:12:5:7:13:92.31%:58:1.3461E-6:32:1:1:0:13 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:22:12:10:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:45:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:44:12:8:4:14:85.71%:55:2.9913E-6:48:2:1:1:14 1/1:51:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:18:11:7:19:94.74%:92:5.6585E-10:60:1:1:0:19 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:12:5:7:13:92.31%:58:1.3461E-6:38:1:0:1:13 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:12:3:9:13:92.31%:58:1.3461E-6:50:1:0:1:13 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:25:12:13:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 0/1:45:16:6:10:19:84.21%:73:4.357E-8:36:3:1:2:19 1/1:47:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:29:12:17:30:96.67%:99:2.6212E-16:37:1:0:1:30 1/1:55:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:18:6:12:19:94.74%:92:5.6585E-10:27:1:0:1:19 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:47:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:23:12:11:24:95.83%:99:7.7525E-13:38:1:0:1:26 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:13:16:30:96.67%:99:2.6212E-16:60:1:0:1:31 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:16:5:11:17:94.12%:81:7.7134E-9:38:1:1:0:17 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:43:17:26:44:97.73%:99:1.7144E-24:39:1:0:1:44 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 1096633 . T G . PASS AC=298;AF=0.993;AN=300;ANN=G|intergenic_region|MODIFIER|PE_PGRS18_Rv0980c-mprA_Rv0981|gene1005-gene1006|intergenic_region|gene1005-gene1006|||n.1096633T>G||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:28:15:13:29:96.55%:99:9.9776E-16:37:1:0:1:30 1/1:52:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:17:9:8:18:94.44%:86:2.0936E-9:60:1:0:1:18 0/1:50:23:14:9:26:88.46%:99:7.3681E-12:39:3:1:2:29 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:57:10:4:6:11:90.91%:47:1.7011E-5:38:1:1:0:11 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:23:10:13:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:43:25:13:12:26:96.15%:99:5.4444E-14:38:1:0:1:26 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:49:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:14:3:11:15:93.33%:69:1.0315E-7:60:1:1:0:16 1/1:51:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 0/1:43:22:8:14:26:84.62%:99:5.5261E-11:47:4:2:2:26 1/1:51:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:47:23:10:13:24:95.83%:99:7.7525E-13:38:1:0:1:25 1/1:49:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:21:12:9:22:95.45%:99:1.0931E-11:60:1:1:0:23 1/1:44:27:16:11:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:28:16:12:29:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:52:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:20:13:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:49:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:26:18:8:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:52:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:32:11:21:33:96.97%:99:4.7095E-18:37:1:0:1:33 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:10:12:23:95.65%:99:2.9149E-12:38:1:0:1:24 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:24:17:7:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 MTB_anc 1097023 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|mprA_Rv0981|gene1006|transcript|Transcript_gene1006|Coding|1/1|c.202A>G|p.Ser68Gly|202/687|202/687|68/228||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1097023A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1097023A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:50:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:54:26:28:55:98.18%:99:4.0229E-32:0:0:0:0:55 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:30:20:10:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:52 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:49:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:21:11:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:40:20:20:41:97.56%:99:9.8874E-23:39:1:0:1:42 1/1:44:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:63:37:26:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:16:18:35:97.14%:99:3.2089E-19:37:1:0:1:37 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:62:22:40:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:66:36:30:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 MTB_anc 1098523 . A T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|mprB_Rv0982|gene1007|transcript|Transcript_gene1007|Coding|1/1|c.1016A>T|p.His339Leu|1016/1515|1016/1515|339/504||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1098523A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1098523A>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:49:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:47:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:61:31:30:61:100%:99:2.609E-36:0:0:0:0:63 1/1:42:54:18:36:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:59:25:34:60:98.33%:99:4.1056E-35:0:0:0:0:61 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:51:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:58 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:38:48:24:24:48:100%:99:1.554E-28:0:0:0:0:51 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:49:30:19:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 MTB_anc 1104690 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv0987_Rv0987|gene1012|transcript|Transcript_gene1012|Coding|1/1|c.2149G>T|p.Val717Phe|2149/2568|2149/2568|717/855||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1104690G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1104690G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:50:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:48:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:28:9:19:29:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:60:27:33:60:100%:99:1.035E-35:0:0:0:0:60 1/1:50:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:49:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:55:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:45:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:44:61:30:31:61:100%:99:2.609E-36:0:0:0:0:62 1/1:39:72:35:37:72:100%:99:6.7558E-43:0:0:0:0:74 1/1:41:66:31:35:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:44:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:61:26:35:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 1105284 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0988_Rv0988|gene1013|transcript|Transcript_gene1013|Coding|1/1|c.169A>G|p.Ile57Val|169/1161|169/1161|57/386||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1105284A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1105284A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:49:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:72:43:29:72:100%:99:6.7558E-43:0:0:0:0:73 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:50:16:34:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:51:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:57:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:10:17:28:96.43%:99:3.7915E-15:38:1:0:1:28 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:35:17:18:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:37:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:68:35:33:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 1107940 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv0990c_Rv0990c|gene1015|transcript|Transcript_gene1015|Coding|1/1|c.160G>T|p.Ala54Ser|160/657|160/657|54/218||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1107940C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1107940C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:50:36:14:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:48:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:61:25:36:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:47:21:26:48:97.92%:99:6.1512E-28:0:0:0:0:48 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:52:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:63:36:27:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:48:19:29:49:97.96%:99:1.554E-28:0:0:0:0:52 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:36:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:41:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:37:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:57 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 1109163 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv0992c_Rv0992c|gene1017|transcript|Transcript_gene1017|Coding|1/1|c.9C>G|p.Ile3Met|9/594|9/594|3/197||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1109163G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1109163G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:50:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:47:32:14:18:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:51:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:38:18:20:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:59:36:23:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:48:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:37:25:12:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:62:24:38:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:48:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:63:29:34:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:36:18:18:37:97.3%:99:2.2598E-21:0:0:0:0:39 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:38:10:28:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:57:38:19:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:26:11:15:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:39:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:48:25:23:49:97.96%:99:1.554E-28:0:0:0:0:49 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 MTB_anc 1110956 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|moeA1_Rv0994|gene1019|transcript|Transcript_gene1019|Coding|1/1|c.688G>T|p.Gly230Cys|688/1281|688/1281|230/426||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.1110956G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1110956G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1110956G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:50:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:60:21:39:60:100%:99:1.035E-35:0:0:0:0:61 1/1:38:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:46:20:26:47:97.87%:99:2.4343E-27:0:0:0:0:49 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:49:18:31:49:100%:99:3.925E-29:0:0:0:0:52 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:35:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:38:58:21:37:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 MTB_anc 1111826 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|rimJ_Rv0995|gene1020|transcript|Transcript_gene1020|Coding|1/1|c.215G>T|p.Arg72Leu|215/612|215/612|72/203||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.1111826G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1111826G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1111826G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:54:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:36:18:18:37:97.3%:99:2.1762E-20:38:1:1:0:37 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:15:14:30:96.67%:99:2.6212E-16:34:1:1:0:30 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:71:38:33:71:100%:99:2.6835E-42:0:0:0:0:74 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:48:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:49:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:40:23:17:41:97.56%:99:9.8874E-23:30:1:1:0:42 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:58:20:38:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 1111925 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|rimJ_Rv0995|gene1020|transcript|Transcript_gene1020|Coding|1/1|c.314A>G|p.Tyr105Cys|314/612|314/612|105/203||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.1111925A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1111925A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1111925A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:36:17:19:37:97.3%:99:2.1762E-20:37:1:0:1:37 1/1:44:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:25:12:38:97.37%:99:5.6582E-21:60:1:1:0:38 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:61:36:25:61:100%:99:2.609E-36:0:0:0:0:61 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:51:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:44:25:19:45:97.78%:99:4.4304E-25:60:1:1:0:46 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:28:13:15:29:96.55%:99:9.9776E-16:39:1:0:1:29 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:57:32:25:58:98.28%:99:9.6072E-33:39:1:1:0:58 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 1113290 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv0996_Rv0996|gene1021|transcript|Transcript_gene1021|Coding|1/1|c.907C>G|p.Gln303Glu|907/1077|907/1077|303/358||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1113290C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1113290C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:64:29:35:65:98.46%:99:4.1752E-38:0:0:0:0:65 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 1123597 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1005c_Rv1005c|gene1032|transcript|Transcript_gene1032|Coding|1/1|c.2C>T|p.Ser1Leu|2/1377|2/1377|1/458||WARNING_TRANSCRIPT_NO_START_CODON,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1123597G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1123597G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:55:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:70:45:25:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:51:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:51:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:52:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:52:34:20:14:35:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:52:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:46:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:48:14:34:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 1127185 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|tatD_Rv1008|gene1035|transcript|Transcript_gene1035|Coding|1/1|c.97G>A|p.Ala33Thr|97/795|97/795|33/264||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1127185G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1127185G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:11:0%:22:1E0:49:11:0:11:11 0/0:0:0:0:0:58:0%:99:1E0:45:58:26:32:59 0/0:0:0:0:0:18:0%:32:1E0:53:18:12:6:18 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:23 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:34:0%:62:1E0:51:34:15:19:34 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:25 0/0:0:0:0:0:56:0%:99:1E0:43:56:33:23:57 0/0:0:0:0:0:12:0%:21:1E0:43:12:5:7:12 0/0:0:0:0:0:54:0%:99:1E0:42:54:31:23:54 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:43:0%:82:1E0:48:43:28:15:45 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:43:0%:82:1E0:49:43:21:22:43 0/0:0:0:0:0:40:0%:74:1E0:40:40:14:26:40 0/0:0:0:0:0:17:0%:33:1E0:46:17:12:5:17 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:25 0/0:0:0:0:0:19:0%:37:1E0:48:19:5:14:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:36 0/0:0:0:0:0:22:0%:40:1E0:49:22:14:8:22 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:39:0%:74:1E0:48:39:17:22:39 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:56:0%:99:1E0:49:56:27:29:57 0/0:60:1:0:1:44:2.27%:69:5E-1:44:43:24:19:44 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:50 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:43 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:43 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:35 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:41 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:39 0/0:0:0:0:0:16:0%:29:1E0:51:16:8:8:16 0/0:0:0:0:0:44:0%:81:1E0:48:44:19:25:44 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:24:0%:44:1E0:37:24:17:7:24 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:41 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:60:1:1:0:29:3.45%:45:5E-1:52:28:17:11:29 0/0:0:0:0:0:36:0%:67:1E0:43:35:23:12:36 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:49 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:44:0%:81:1E0:46:44:25:19:44 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:26 0/0:0:0:0:0:15:0%:29:1E0:41:15:9:6:15 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:19:8:27 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:39 0/0:60:1:1:0:28:3.57%:41:5E-1:45:27:13:14:28 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:50 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:51:0%:97:1E0:45:51:21:30:51 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:19 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:25 0/0:0:0:0:0:35:0%:67:1E0:50:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:50:27:16:11:27 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:51 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:46:0%:85:1E0:43:46:30:16:46 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:41 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:38 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:30 0/0:0:0:0:0:52:0%:96:1E0:40:52:22:30:53 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:25 0/0:0:0:0:0:40:0%:74:1E0:40:40:29:11:40 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:24 0/0:0:0:0:0:53:0%:99:1E0:39:53:30:23:54 0/0:0:0:0:0:52:0%:96:1E0:39:52:34:18:52 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:17:0%:33:1E0:36:17:10:7:18 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:49 0/0:0:0:0:0:43:0%:82:1E0:38:43:27:16:43 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:32:0%:59:1E0:37:32:20:12:32 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:49 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:35 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:37 0/0:0:0:0:0:37:0%:70:1E0:38:37:21:16:38 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:39 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:33 0/0:0:0:0:0:44:0%:81:1E0:39:44:24:20:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:39 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:45 0/0:0:0:0:0:50:0%:92:1E0:43:50:33:17:50 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:41 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:48:33:21:12:33 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:51 0/0:0:0:0:0:51:0%:97:1E0:41:51:35:16:52 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 MTB_anc 1131300 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1012_Rv1012|gene1039|transcript|Transcript_gene1039|Coding|1/1|c.173A>G|p.Asn58Ser|173/294|173/294|58/97||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1131300A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1131300A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:61:35:26:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:50:22:28:51:98.04%:99:1.3013E-28:38:1:0:1:52 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:46:22:24:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:30:11:19:31:96.77%:99:8.4556E-18:0:0:0:0:32 1/1:49:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:43:25:18:44:97.73%:99:1.5066E-25:0:0:0:0:45 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:31:20:11:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:60:26:34:60:100%:99:1.035E-35:0:0:0:0:62 1/1:42:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:24:12:12:25:96%:99:3.101E-14:0:0:0:0:27 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:37:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:45 MTB_anc 1135251 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|lpqT_Rv1016c|gene1043|transcript|Transcript_gene1043|Coding|1/1|c.215A>C|p.Glu72Ala|215/681|215/681|72/226||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.1135251T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1135251T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1135251T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:52:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:29:13:16:30:96.67%:99:2.6212E-16:60:1:0:1:31 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:70:37:33:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:13:17:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:16:13:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:63:31:32:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:43:19:24:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:41:21:20:42:97.62%:99:2.5612E-23:38:1:0:1:43 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:44:19:25:45:97.78%:99:4.4304E-25:34:1:1:0:45 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:44:22:22:45:97.78%:99:4.4304E-25:37:1:0:1:46 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:43:30:13:44:97.73%:99:1.7144E-24:38:1:1:0:44 1/1:42:60:34:26:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 MTB_anc 1143832 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|lpqU_Rv1022|gene1050|transcript|Transcript_gene1050|Coding|1/1|c.97C>A|p.Pro33Thr|97/732|97/732|33/243||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1143832C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1143832C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:39:9:30:39:100%:99:3.6742E-23:0:0:0:0:45 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:34:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:24:7:17:24:100%:99:3.101E-14:0:0:0:0:27 1/1:34:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:36:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:38:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:35:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:36:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:34:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:36:8:28:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:34:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:34:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:28 1/1:34:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:40:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:41:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:27 1/1:35:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:37:8:29:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:33:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:35:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:34:24:3:21:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:34:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:32:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:35:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:38:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:35:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:21 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:34:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:34:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:33:6:27:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:34:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:35:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:35:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:48 1/1:37:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:24:9:15:24:100%:99:3.101E-14:0:0:0:0:30 1/1:35:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:33:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:35:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:34:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:33:24:7:17:24:100%:99:3.101E-14:0:0:0:0:30 1/1:34:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:34:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:33:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:33:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:34:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:36:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:34:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:34 1/1:34:24:2:22:24:100%:99:3.101E-14:0:0:0:0:26 1/1:34:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:35:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:39:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:43:4:39:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:35:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 MTB_anc 1144585 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|eno_Rv1023|gene1051|transcript|Transcript_gene1051|Coding|1/1|c.22G>A|p.Gly8Arg|22/1290|22/1290|8/429||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1144585G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1144585G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:50:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:11:18:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:21:17:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:43:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:27:12:15:28:96.43%:99:3.7915E-15:38:1:1:0:28 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:32:15:17:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 1145293 . G A . PASS AC=1;AF=3.497e-03;AN=286;ANN=A|missense_variant|MODERATE|eno_Rv1023|gene1051|transcript|Transcript_gene1051|Coding|1/1|c.730G>A|p.Ala244Thr|730/1290|730/1290|244/429||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1145293G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1145293G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:3:0:3:23:13.04%:22:1.1667E-1:40:20:5:15:28 0/0:0:0:0:0:14:0%:25:1E0:45:14:6:8:16 0/0:32:1:0:1:26:3.85%:38:5E-1:37:25:14:11:32 0/0:30:2:0:2:16:12.5%:15:2.4194E-1:43:14:4:10:18 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:10 0/0:32:1:0:1:16:6.25%:21:5E-1:45:15:5:10:17 0/0:0:0:0:0:17:0%:33:1E0:41:17:9:8:24 0/0:36:1:0:1:9:11.11%:11:5E-1:44:8:2:6:11 0/0:38:1:0:1:7:14.29%:8:5E-1:49:6:1:5:7 0/0:28:3:0:3:14:21.43%:9:1.1111E-1:45:11:4:7:17 0/0:30:1:0:1:11:9.09%:14:5E-1:44:10:5:5:12 0/0:34:4:0:4:23:17.39%:18:5.4264E-2:45:19:8:11:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:32:1:0:1:16:6.25%:21:5E-1:46:15:7:8:20 0/0:27:2:0:2:8:25%:5:2.3333E-1:37:6:1:5:8 0/0:33:4:0:4:10:40%:3:4.3344E-2:36:6:3:3:18 0/0:26:1:0:1:14:7.14%:17:5E-1:41:13:8:5:16 0/0:0:0:0:0:12:0%:21:1E0:42:12:7:5:13 0/0:0:0:0:0:8:0%:14:1E0:40:8:4:4:10 0/0:28:2:0:2:11:18.18%:10:2.381E-1:44:9:2:7:12 0/0:27:2:0:2:14:14.29%:12:2.4074E-1:39:12:2:10:14 0/0:25:1:0:1:17:5.88%:24:5E-1:41:16:3:13:19 0/0:35:2:0:2:8:25%:5:2.3333E-1:44:6:3:3:9 0/0:31:2:0:2:22:9.09%:24:2.4419E-1:39:20:10:10:23 0/0:30:3:0:3:15:20%:11:1.1207E-1:36:12:5:7:15 0/0:0:0:0:0:9:0%:18:1E0:43:9:1:8:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:10 0/0:28:2:0:2:13:15.38%:13:2.4E-1:40:11:5:6:15 0/0:24:1:0:1:11:9.09%:14:5E-1:46:10:0:10:11 0/0:0:0:0:0:13:0%:25:1E0:42:13:3:10:15 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:18 0/0:25:1:0:1:15:6.67%:21:5E-1:42:14:6:8:17 0/0:29:1:0:1:9:11.11%:11:5E-1:35:8:6:2:13 0/0:30:2:0:2:20:10%:21:2.4359E-1:46:18:8:10:21 0/0:0:0:0:0:11:0%:22:1E0:41:11:5:6:12 0/0:24:1:0:1:21:4.76%:31:5E-1:40:20:9:11:24 0/0:29:5:0:5:32:15.62%:24:2.6412E-2:42:27:8:19:37 0/0:30:5:0:5:32:15.62%:24:2.6412E-2:45:27:13:14:38 0/0:30:3:0:3:24:12.5%:22:1.1702E-1:43:21:6:15:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:4:14:20 0/0:32:1:0:1:17:5.88%:24:5E-1:37:16:7:9:19 0/0:36:1:0:1:9:11.11%:11:5E-1:39:8:4:4:14 0/0:0:0:0:0:12:0%:21:1E0:43:12:4:8:13 0/0:36:1:0:1:13:7.69%:18:5E-1:40:12:4:8:14 0/0:0:0:0:0:19:0%:37:1E0:40:19:4:15:19 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:13 0/0:34:1:0:1:24:4.17%:34:5E-1:40:23:8:15:26 0/0:30:3:0:3:20:15%:16:1.1538E-1:40:17:7:10:23 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:26 0/0:0:0:0:0:10:0%:17:1E0:49:10:2:8:11 0/0:29:4:0:4:18:22.22%:10:5.1948E-2:41:14:6:8:22 0/0:0:0:0:0:9:0%:18:1E0:45:9:0:9:11 0/0:27:3:0:3:15:20%:11:1.1207E-1:36:12:5:7:19 0/0:33:1:0:1:10:10%:11:5E-1:41:9:4:5:10 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:24 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:15 0/0:27:2:0:2:9:22.22%:7:2.3529E-1:38:7:2:5:10 0/0:25:1:0:1:18:5.56%:24:5E-1:39:17:7:10:18 0/0:34:4:0:4:19:21.05%:13:5.251E-2:44:15:10:5:23 0/0:36:1:0:1:15:6.67%:21:5E-1:34:14:8:6:21 0/0:37:1:0:1:12:8.33%:14:5E-1:35:11:7:4:14 0/0:24:1:0:1:8:12.5%:8:5E-1:41:7:2:5:9 0/0:28:2:0:2:9:22.22%:7:2.3529E-1:39:7:4:3:9 0/0:36:1:0:1:12:8.33%:14:5E-1:40:11:5:6:17 0/0:32:2:0:2:17:11.76%:18:2.4242E-1:42:15:4:11:23 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:11 0/0:29:5:0:5:28:17.86%:19:2.5729E-2:40:23:9:14:34 0/0:0:0:0:0:10:0%:17:1E0:47:10:3:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:27:1:0:1:18:5.56%:24:5E-1:43:17:5:12:20 0/0:0:0:0:0:11:0%:22:1E0:43:11:6:5:16 0/0:0:0:0:0:7:0%:14:1E0:42:7:3:4:7 0/0:33:3:0:3:16:18.75%:11:1.129E-1:44:13:5:8:20 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:23 0/0:0:0:0:0:12:0%:21:1E0:40:12:6:6:16 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:11 0/0:32:1:0:1:16:6.25%:21:5E-1:41:15:7:8:22 0/0:27:1:0:1:13:7.69%:18:5E-1:42:12:4:8:14 0/0:25:2:0:2:14:14.29%:12:2.4074E-1:39:12:1:11:17 0/0:27:1:0:1:13:7.69%:18:5E-1:36:12:4:8:13 0/0:34:2:0:2:19:10.53%:21:2.4324E-1:39:17:7:10:21 0/0:27:1:0:1:10:10%:11:5E-1:35:9:4:5:11 0/0:0:0:0:0:10:0%:17:1E0:40:10:4:6:16 0/0:0:0:0:0:10:0%:17:1E0:41:10:2:8:11 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:16 0/0:0:0:0:0:10:0%:17:1E0:46:10:2:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:27:2:0:2:22:9.09%:24:2.4419E-1:44:20:10:10:27 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:15 0/0:34:2:0:2:15:13.33%:16:2.4138E-1:39:13:6:7:16 0/0:33:2:0:2:15:13.33%:16:2.4138E-1:37:13:10:3:18 0/0:30:6:0:6:23:26.09%:11:1.0777E-2:45:17:7:10:27 0/0:35:2:0:2:14:14.29%:12:2.4074E-1:41:12:4:8:19 0/0:47:1:1:0:17:5.88%:24:5E-1:42:16:6:10:21 0/0:0:0:0:0:12:0%:21:1E0:44:12:6:6:13 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:9 0/0:0:0:0:0:12:0%:21:1E0:39:12:5:7:13 0/0:0:0:0:0:9:0%:18:1E0:33:9:3:6:10 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:12 0/0:0:0:0:0:7:0%:14:1E0:38:7:1:6:7 0/0:36:1:0:1:9:11.11%:11:5E-1:42:8:3:5:9 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:20 0/0:35:2:0:2:9:22.22%:7:2.3529E-1:35:7:2:5:10 0/0:37:1:0:1:7:14.29%:8:5E-1:37:6:3:3:8 0/0:0:0:0:0:13:0%:25:1E0:39:13:3:10:17 0/0:27:1:0:1:16:6.25%:21:5E-1:43:15:8:7:18 0/0:29:1:0:1:14:7.14%:17:5E-1:41:13:4:9:16 0/0:0:0:0:0:8:0%:14:1E0:38:8:3:5:8 0/0:33:1:0:1:11:9.09%:14:5E-1:41:10:2:8:12 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:14 0/0:0:0:0:0:13:0%:25:1E0:37:13:7:6:15 0/0:35:2:0:2:12:16.67%:10:2.3913E-1:37:10:2:8:13 0/0:0:0:0:0:12:0%:21:1E0:41:12:4:8:14 0/0:33:3:0:3:16:18.75%:11:1.129E-1:38:13:7:6:22 0/0:35:1:0:1:8:12.5%:8:5E-1:48:7:3:4:8 0/0:24:1:0:1:10:10%:11:5E-1:39:9:2:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:32:2:0:2:8:25%:5:2.3333E-1:35:6:1:5:9 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:31 0/0:26:1:0:1:25:4%:38:5E-1:38:24:8:16:31 0/0:0:0:0:0:11:0%:22:1E0:42:11:6:5:11 0/0:28:2:0:2:8:25%:5:2.3333E-1:39:6:1:5:9 0/0:0:0:0:0:13:0%:25:1E0:36:13:3:10:17 0/0:36:1:0:1:14:7.14%:17:5E-1:34:13:6:7:15 0/0:30:1:0:1:14:7.14%:17:5E-1:35:13:0:13:16 0/0:0:0:0:0:10:0%:17:1E0:39:10:4:6:14 0/0:30:2:0:2:15:13.33%:16:2.4138E-1:39:13:5:8:15 0/0:32:1:0:1:10:10%:11:5E-1:36:9:2:7:11 0/0:25:1:0:1:10:10%:11:5E-1:33:9:3:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:27:1:0:1:13:7.69%:18:5E-1:38:12:3:9:13 0/0:37:2:0:2:10:20%:7:2.3684E-1:36:8:3:5:10 0/0:33:2:0:2:14:14.29%:12:2.4074E-1:37:12:5:7:16 0/0:30:1:0:1:14:7.14%:17:5E-1:40:13:4:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:31:7:0:7:27:25.93%:22:5.0143E-3:37:20:8:12:30 0/0:36:1:0:1:15:6.67%:21:5E-1:38:14:9:5:20 0/0:36:1:0:1:14:7.14%:17:5E-1:38:13:6:7:15 0/0:31:3:0:3:13:23.08%:9:1.1E-1:36:10:4:6:15 0/0:28:2:0:2:10:20%:7:2.3684E-1:47:8:3:5:14 0/0:31:2:0:2:9:22.22%:7:2.3529E-1:35:7:5:2:9 0/0:25:1:0:1:24:4.17%:34:5E-1:43:23:6:17:27 0/0:36:1:0:1:15:6.67%:21:5E-1:38:14:9:5:17 0/0:36:1:0:1:20:5%:27:5E-1:40:19:7:12:22 0/0:25:1:0:1:14:7.14%:17:5E-1:43:13:4:9:15 0/0:25:3:0:3:16:18.75%:11:1.129E-1:40:13:4:9:21 0/0:31:2:0:2:13:15.38%:13:2.4E-1:39:11:2:9:14 0/0:25:1:0:1:20:5%:27:5E-1:41:19:5:14:21 0/0:32:1:0:1:19:5.26%:28:5E-1:36:18:5:13:20 MTB_anc 1145302 . T A . PASS AC=2;AF=7.143e-03;AN=280;ANN=A|missense_variant|MODERATE|eno_Rv1023|gene1051|transcript|Transcript_gene1051|Coding|1/1|c.739T>A|p.Phe247Ile|739/1290|739/1290|247/429||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1145302T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1145302T>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:34:5:0:5:23:21.74%:14:2.4548E-2:40:18:2:16:25 0/0:0:0:0:0:12:0%:21:1E0:45:12:5:7:15 0/0:29:2:0:2:24:8.33%:27:2.4468E-1:35:22:11:11:31 0/0:33:2:0:2:14:14.29%:12:2.4074E-1:44:12:3:9:17 0/0:39:1:0:1:11:9.09%:14:5E-1:34:10:4:6:12 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:18 0/0:29:2:0:2:18:11.11%:18:2.4286E-1:41:16:7:9:23 0/0:36:2:0:2:12:16.67%:10:2.3913E-1:40:10:4:6:13 0/0:35:1:0:1:8:12.5%:8:5E-1:46:7:2:5:8 0/0:0:0:0:0:10:0%:17:1E0:43:10:2:8:16 0/0:0:0:0:0:12:0%:21:1E0:43:12:5:7:14 0/0:36:4:0:4:21:19.05%:15:5.3471E-2:40:17:5:12:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:35:2:0:2:21:9.52%:25:2.439E-1:40:19:8:11:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:6:0:6:14:42.86%:20:7.971E-3:36:8:4:4:18 0/0:0:0:0:0:10:0%:17:1E0:44:10:5:5:15 0/0:0:0:0:0:11:0%:22:1E0:38:11:6:5:14 0/0:0:0:0:0:8:0%:14:1E0:39:8:4:4:9 0/0:38:2:0:2:9:22.22%:7:2.3529E-1:37:7:2:5:12 0/0:38:1:0:1:13:7.69%:18:5E-1:39:12:2:10:15 0/0:0:0:0:0:16:0%:29:1E0:39:16:3:13:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:2:0:2:20:10%:21:2.4359E-1:39:18:9:9:22 0/0:37:3:0:3:16:18.75%:11:1.129E-1:37:13:6:7:17 0/0:0:0:0:0:10:0%:17:1E0:41:10:1:9:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:10:0%:17:1E0:31:10:6:4:11 0/0:26:2:0:2:10:20%:7:2.3684E-1:38:8:3:5:13 0/0:0:0:0:0:11:0%:22:1E0:41:11:0:11:12 0/0:26:1:0:1:11:9.09%:14:5E-1:40:10:2:8:11 0/0:0:0:0:0:15:0%:29:1E0:38:15:4:11:16 0/0:26:2:0:2:14:14.29%:12:2.4074E-1:42:12:5:7:17 0/0:33:1:0:1:11:9.09%:14:5E-1:35:10:6:4:15 0/0:35:2:0:2:23:8.7%:28:2.4444E-1:42:21:10:11:23 0/0:0:0:0:0:12:0%:21:1E0:42:12:4:8:12 0/0:33:1:0:1:18:5.56%:24:5E-1:38:17:7:10:22 0/0:33:3:0:3:30:10%:31:1.1864E-1:42:27:7:20:38 0/0:27:2:0:2:25:8%:31:2.449E-1:45:23:10:13:36 0/0:34:3:0:3:24:12.5%:22:1.1702E-1:39:21:7:14:28 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:21 0/0:34:2:0:2:16:12.5%:15:2.4194E-1:36:14:6:8:19 0/0:36:2:0:2:11:18.18%:10:2.381E-1:35:9:3:6:15 0/0:0:0:0:0:11:0%:22:1E0:42:11:3:8:12 0/0:25:1:0:1:13:7.69%:18:5E-1:38:12:4:8:14 0/0:0:0:0:0:20:0%:36:1E0:41:20:5:15:20 0/0:0:0:0:0:10:0%:17:1E0:40:10:2:8:12 0/0:36:1:0:1:24:4.17%:34:5E-1:39:23:7:16:27 0/0:33:3:0:3:20:15%:16:1.1538E-1:39:17:8:9:23 0/0:37:3:0:3:24:12.5%:22:1.1702E-1:38:21:10:11:27 0/0:38:1:0:1:10:10%:11:5E-1:50:9:2:7:10 0/0:34:3:0:3:18:16.67%:14:1.1429E-1:42:15:6:9:22 0/0:37:1:0:1:11:9.09%:14:5E-1:43:10:0:10:11 0/0:26:2:0:2:14:14.29%:12:2.4074E-1:35:12:5:7:19 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:9 0/0:39:1:0:1:20:5%:27:5E-1:38:19:8:11:25 0/0:0:0:0:0:11:0%:22:1E0:32:11:5:6:16 0/0:37:1:0:1:9:11.11%:11:5E-1:37:8:3:5:11 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:18 0/0:35:3:0:3:17:17.65%:14:1.1364E-1:41:14:9:5:24 0/0:30:3:0:3:17:17.65%:14:1.1364E-1:35:14:7:7:20 0/0:36:1:0:1:12:8.33%:14:5E-1:35:11:7:4:15 0/0:35:1:0:1:9:11.11%:11:5E-1:44:8:3:5:10 0/0:37:1:0:1:7:14.29%:8:5E-1:38:6:3:3:9 0/0:31:3:0:3:14:21.43%:9:1.1111E-1:37:11:5:6:17 0/0:30:3:0:3:17:17.65%:14:1.1364E-1:42:14:2:12:24 0/0:0:0:0:0:7:0%:14:1E0:41:7:3:4:11 0/0:35:4:0:4:26:15.38%:20:5.5222E-2:39:22:9:13:34 0/0:0:0:0:0:9:0%:18:1E0:45:9:2:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:1:0:1:17:5.88%:24:5E-1:42:16:4:12:20 0/0:34:1:0:1:11:9.09%:14:5E-1:42:10:5:5:16 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:9 0/0:31:4:0:4:19:21.05%:13:5.251E-2:40:15:8:7:23 0/0:0:0:0:0:18:0%:32:1E0:43:18:6:12:21 0/0:33:1:0:1:15:6.67%:21:5E-1:35:14:6:8:19 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:13 0/0:37:1:0:1:17:5.88%:24:5E-1:40:16:7:9:21 0/0:28:2:0:2:13:15.38%:13:2.4E-1:39:11:3:8:14 0/0:34:3:0:3:15:20%:11:1.1207E-1:38:12:2:10:15 0/0:37:1:0:1:11:9.09%:14:5E-1:35:10:3:7:11 0/0:37:1:0:1:16:6.25%:21:5E-1:40:15:6:9:20 0/0:33:1:0:1:10:10%:11:5E-1:36:9:2:7:12 0/0:33:2:0:2:11:18.18%:10:2.381E-1:42:9:3:6:14 0/0:0:0:0:0:7:0%:14:1E0:43:7:1:6:9 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:17 0/0:0:0:0:0:11:0%:22:1E0:42:11:3:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:34:3:0:3:24:12.5%:22:1.1702E-1:40:21:11:10:28 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:15 0/0:33:1:0:1:11:9.09%:14:5E-1:37:10:4:6:14 0/0:35:1:0:1:15:6.67%:21:5E-1:38:14:9:5:20 0/0:31:5:0:5:24:20.83%:14:2.4823E-2:43:19:7:12:27 0/0:27:4:0:4:16:25%:8:5.0612E-2:42:12:4:8:21 0/0:37:1:0:1:20:5%:27:5E-1:41:19:9:10:20 0/0:35:1:0:1:14:7.14%:17:5E-1:41:13:6:7:15 0/0:0:0:0:0:8:0%:14:1E0:39:8:2:6:11 0/0:35:1:0:1:11:9.09%:14:5E-1:38:10:4:6:11 0/0:35:1:0:1:8:12.5%:8:5E-1:35:7:2:5:10 0/0:33:1:0:1:9:11.11%:11:5E-1:35:8:4:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:40:8:3:5:10 0/0:29:1:0:1:17:5.88%:24:5E-1:40:16:3:13:21 0/0:38:2:0:2:9:22.22%:7:2.3529E-1:35:7:2:5:11 0/0:33:2:0:2:9:22.22%:7:2.3529E-1:36:7:3:4:9 0/0:33:1:0:1:12:8.33%:14:5E-1:37:11:4:7:17 0/0:29:2:0:2:16:12.5%:15:2.4194E-1:42:14:7:7:17 0/0:35:2:0:2:15:13.33%:16:2.4138E-1:47:13:4:9:16 0/0:0:0:0:0:10:0%:17:1E0:38:10:4:6:11 0/0:38:1:0:1:10:10%:11:5E-1:45:9:0:9:10 0/0:25:1:0:1:14:7.14%:17:5E-1:37:13:7:6:15 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:12 0/0:38:2:0:2:12:16.67%:10:2.3913E-1:35:10:2:8:14 0/0:0:0:0:0:13:0%:25:1E0:41:13:5:8:15 0/0:31:3:0:3:17:17.65%:14:1.1364E-1:38:14:6:8:23 0/0:37:1:0:1:9:11.11%:11:5E-1:36:8:3:5:9 0/0:33:1:0:1:10:10%:11:5E-1:38:9:2:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:29 0/0:28:3:0:3:27:11.11%:28:1.1792E-1:36:24:8:16:32 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:10 0/0:37:1:0:1:9:11.11%:11:5E-1:34:8:1:7:11 0/0:37:1:0:1:18:5.56%:24:5E-1:36:17:7:10:19 0/0:37:1:0:1:11:9.09%:14:5E-1:35:10:4:6:15 0/0:31:2:0:2:15:13.33%:16:2.4138E-1:35:13:2:11:16 0/0:35:1:0:1:12:8.33%:14:5E-1:37:11:4:7:15 0/0:38:1:0:1:15:6.67%:21:5E-1:38:14:7:7:17 0/0:24:1:0:1:12:8.33%:14:5E-1:36:11:3:8:12 0/0:35:2:0:2:8:25%:5:2.3333E-1:36:6:0:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:40:12:3:9:13 0/0:36:2:0:2:11:18.18%:10:2.381E-1:36:9:3:6:12 0/0:34:3:0:3:16:18.75%:11:1.129E-1:40:13:5:8:17 0/0:36:2:0:2:15:13.33%:16:2.4138E-1:37:13:4:9:16 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 0/1:35:7:0:7:26:26.92%:23:4.9169E-3:36:19:8:11:30 0/0:29:5:1:4:20:25%:10:2.3562E-2:33:15:8:7:22 0/0:25:1:0:1:15:6.67%:21:5E-1:39:14:6:8:16 0/0:29:2:0:2:11:18.18%:10:2.381E-1:38:9:5:4:13 0/0:38:2:0:2:12:16.67%:10:2.3913E-1:45:10:5:5:16 0/0:30:2:0:2:8:25%:5:2.3333E-1:36:6:4:2:8 0/0:0:0:0:0:21:0%:40:1E0:38:21:5:16:25 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:15 0/0:20:1:0:1:16:6.25%:21:5E-1:40:15:3:12:20 0/0:0:0:0:0:13:0%:25:1E0:41:13:4:9:15 0/0:36:3:0:3:17:17.65%:14:1.1364E-1:39:14:4:10:22 0/0:38:1:0:1:13:7.69%:18:5E-1:42:12:4:8:14 0/0:36:2:0:2:21:9.52%:25:2.439E-1:40:19:4:15:21 0/0:24:1:0:1:16:6.25%:21:5E-1:36:15:2:13:21 MTB_anc 1145306 . T A . PASS AC=6;AF=0.021;AN=284;ANN=A|missense_variant|MODERATE|eno_Rv1023|gene1051|transcript|Transcript_gene1051|Coding|1/1|c.743T>A|p.Phe248Tyr|743/1290|743/1290|248/429||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1145306T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1145306T>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:33:5:0:5:22:22.73%:12:2.4248E-2:40:17:2:15:25 0/0:0:0:0:0:12:0%:21:1E0:49:12:5:7:16 0/0:28:2:0:2:24:8.33%:27:2.4468E-1:38:22:11:11:30 0/0:32:2:0:2:14:14.29%:12:2.4074E-1:44:12:2:10:16 0/0:36:1:0:1:11:9.09%:14:5E-1:34:10:4:6:12 0/0:32:1:0:1:18:5.56%:24:5E-1:41:17:7:10:18 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:23 0/0:31:2:0:2:11:18.18%:10:2.381E-1:44:9:4:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:26:3:0:3:13:23.08%:9:1.1E-1:43:10:3:7:16 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:16 0/0:33:5:0:5:20:25%:10:2.3562E-2:44:15:4:11:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:36:1:0:1:19:5.26%:28:5E-1:42:18:7:11:25 0/0:26:1:0:1:8:12.5%:8:5E-1:42:7:1:6:9 0/1:32:6:0:6:17:35.29%:20:9.2021E-3:40:11:6:5:22 0/0:29:1:0:1:13:7.69%:18:5E-1:42:12:7:5:15 0/0:0:0:0:0:12:0%:21:1E0:39:12:7:5:13 0/0:0:0:0:0:7:0%:14:1E0:40:7:3:4:8 0/0:34:1:0:1:9:11.11%:11:5E-1:40:8:2:6:12 0/0:29:3:0:3:15:20%:11:1.1207E-1:39:12:2:10:15 0/0:32:3:0:3:18:16.67%:14:1.1429E-1:38:15:3:12:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:2:0:2:20:10%:21:2.4359E-1:38:18:8:10:21 0/0:31:3:0:3:18:16.67%:14:1.1429E-1:37:15:8:7:18 0/0:24:1:0:1:11:9.09%:14:5E-1:40:10:2:8:11 0/0:30:3:0:3:9:33.33%:4:1.0294E-1:41:6:4:2:10 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:10 0/0:29:2:0:2:9:22.22%:7:2.3529E-1:40:7:3:4:12 0/0:37:1:0:1:12:8.33%:14:5E-1:42:11:0:11:12 0/0:0:0:0:0:10:0%:17:1E0:41:10:2:8:11 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:16 0/0:47:1:1:0:12:8.33%:14:5E-1:44:11:4:7:17 0/0:0:0:0:0:10:0%:17:1E0:34:10:7:3:15 0/0:30:1:0:1:21:4.76%:31:5E-1:43:20:9:11:22 0/0:0:0:0:0:11:0%:22:1E0:45:11:4:7:12 0/0:24:1:0:1:18:5.56%:24:5E-1:39:17:7:10:22 0/1:29:7:0:7:37:18.92%:22:5.721E-3:41:30:11:19:40 0/0:31:4:0:4:27:14.81%:23:5.5494E-2:43:23:13:10:36 0/0:32:3:0:3:23:13.04%:22:1.1667E-1:42:20:8:12:27 0/0:32:1:0:1:20:5%:27:5E-1:39:19:6:13:21 0/0:33:2:0:2:17:11.76%:18:2.4242E-1:37:15:8:7:19 0/0:30:1:0:1:11:9.09%:14:5E-1:36:10:4:6:14 0/0:0:0:0:0:11:0%:22:1E0:42:11:3:8:12 0/0:29:2:0:2:16:12.5%:15:2.4194E-1:37:14:5:9:16 0/0:0:0:0:0:18:0%:32:1E0:41:18:3:15:18 0/0:0:0:0:0:10:0%:17:1E0:40:10:2:8:12 0/0:30:1:0:1:23:4.35%:34:5E-1:38:22:7:15:26 0/0:36:4:0:4:21:19.05%:15:5.3471E-2:39:17:9:8:23 0/0:34:2:0:2:22:9.09%:24:2.4419E-1:39:20:8:12:27 0/0:29:1:0:1:9:11.11%:11:5E-1:49:8:2:6:9 0/0:27:4:0:4:19:21.05%:13:5.251E-2:42:15:6:9:22 0/0:0:0:0:0:10:0%:17:1E0:47:10:0:10:11 0/0:29:2:0:2:14:14.29%:12:2.4074E-1:38:12:5:7:19 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:8 0/0:36:1:0:1:23:4.35%:34:5E-1:39:22:11:11:26 0/0:0:0:0:0:14:0%:25:1E0:36:14:7:7:16 0/0:32:1:0:1:8:12.5%:8:5E-1:36:7:3:4:10 0/0:25:1:0:1:18:5.56%:24:5E-1:38:17:8:9:19 0/0:32:4:0:4:19:21.05%:13:5.251E-2:40:15:10:5:23 0/0:33:3:0:3:15:20%:11:1.1207E-1:37:12:8:4:19 0/0:32:1:0:1:12:8.33%:14:5E-1:37:11:8:3:14 0/0:31:2:0:2:11:18.18%:10:2.381E-1:44:9:3:6:11 0/0:35:1:0:1:7:14.29%:8:5E-1:42:6:3:3:10 0/0:30:4:0:4:15:26.67%:8:4.9808E-2:39:11:5:6:17 0/0:32:4:0:4:20:20%:13:5.3015E-2:41:16:4:12:24 0/0:25:1:0:1:9:11.11%:11:5E-1:36:8:5:3:10 0/1:33:7:0:7:29:24.14%:22:5.1909E-3:40:22:10:12:33 0/0:26:1:0:1:10:10%:11:5E-1:46:9:3:6:12 0/0:0:0:0:0:7:0%:14:1E0:38:7:3:4:8 0/0:32:2:0:2:20:10%:21:2.4359E-1:42:18:5:13:21 0/0:0:0:0:0:11:0%:22:1E0:44:11:6:5:15 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:9 0/0:32:4:0:4:22:18.18%:15:5.3885E-2:44:18:10:8:25 0/0:0:0:0:0:17:0%:33:1E0:41:17:5:12:21 0/0:0:0:0:0:14:0%:25:1E0:39:14:8:6:19 0/0:24:1:0:1:13:7.69%:18:5E-1:39:12:5:7:14 0/0:32:2:0:2:18:11.11%:18:2.4286E-1:41:16:6:10:20 0/0:27:2:0:2:11:18.18%:10:2.381E-1:42:9:2:7:11 0/0:34:2:0:2:15:13.33%:16:2.4138E-1:37:13:3:10:16 0/0:27:1:0:1:12:8.33%:14:5E-1:37:11:4:7:12 0/0:33:2:0:2:18:11.11%:18:2.4286E-1:40:16:6:10:20 0/0:27:1:0:1:14:7.14%:17:5E-1:36:13:4:9:14 0/0:35:1:0:1:11:9.09%:14:5E-1:37:10:3:7:14 0/0:27:1:0:1:9:11.11%:11:5E-1:42:8:1:7:9 0/0:36:1:0:1:14:7.14%:17:5E-1:35:13:9:4:16 0/0:0:0:0:0:9:0%:18:1E0:44:9:2:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:29:3:0:3:26:11.54%:25:1.1765E-1:41:23:13:10:28 0/0:27:3:0:3:15:20%:11:1.1207E-1:37:12:6:6:16 0/0:26:2:0:2:11:18.18%:10:2.381E-1:39:9:4:5:13 0/0:34:1:0:1:16:6.25%:21:5E-1:41:15:9:6:20 0/1:30:7:0:7:24:29.17%:23:4.7006E-3:46:17:7:10:27 0/1:29:6:0:6:19:31.58%:20:9.828E-3:43:13:5:8:21 0/0:37:1:0:1:18:5.56%:24:5E-1:43:17:7:10:19 0/0:27:1:0:1:12:8.33%:14:5E-1:45:11:4:7:15 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:11 0/0:36:1:0:1:11:9.09%:14:5E-1:42:10:4:6:11 0/0:29:1:0:1:9:11.11%:11:5E-1:36:8:2:6:10 0/0:33:1:0:1:9:11.11%:11:5E-1:37:8:4:4:9 0/0:25:1:0:1:8:12.5%:8:5E-1:41:7:2:5:8 0/0:0:0:0:0:9:0%:18:1E0:40:9:3:6:11 0/0:0:0:0:0:19:0%:37:1E0:39:19:6:13:21 0/0:36:2:0:2:10:20%:7:2.3684E-1:37:8:2:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:1:0:1:14:7.14%:17:5E-1:38:13:4:9:18 0/0:35:1:0:1:14:7.14%:17:5E-1:43:13:6:7:17 0/0:30:2:0:2:15:13.33%:16:2.4138E-1:49:13:4:9:16 0/0:0:0:0:0:10:0%:17:1E0:41:10:4:6:11 0/0:0:0:0:0:7:0%:14:1E0:47:7:0:7:10 0/0:35:1:0:1:13:7.69%:18:5E-1:38:12:7:5:14 0/0:0:0:0:0:10:0%:17:1E0:39:10:5:5:12 0/0:32:3:0:3:11:27.27%:7:1.0714E-1:36:8:3:5:14 0/0:0:0:0:0:12:0%:21:1E0:41:12:5:7:14 0/0:30:3:0:3:18:16.67%:14:1.1429E-1:40:15:7:8:23 0/0:35:1:0:1:9:11.11%:11:5E-1:39:8:3:5:9 0/0:34:1:0:1:10:10%:11:5E-1:39:9:2:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:1:0:1:26:3.85%:38:5E-1:40:25:11:14:29 0/0:34:4:0:4:29:13.79%:26:5.5981E-2:38:25:9:16:32 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:10 0/0:32:1:0:1:8:12.5%:8:5E-1:39:7:1:6:11 0/0:28:2:0:2:19:10.53%:21:2.4324E-1:38:17:6:11:20 0/0:35:1:0:1:14:7.14%:17:5E-1:35:13:5:8:16 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:17 0/0:32:1:0:1:13:7.69%:18:5E-1:36:12:5:7:15 0/0:32:1:0:1:15:6.67%:21:5E-1:38:14:8:6:18 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:13 0/0:34:2:0:2:10:20%:7:2.3684E-1:33:8:2:6:13 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:9 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:12 0/0:28:2:0:2:11:18.18%:10:2.381E-1:36:9:4:5:12 0/0:31:3:0:3:18:16.67%:14:1.1429E-1:37:15:6:9:18 0/0:32:2:0:2:15:13.33%:16:2.4138E-1:39:13:4:9:15 0/0:0:0:0:0:9:0%:18:1E0:34:9:4:5:10 0/1:32:7:0:7:27:25.93%:22:5.0143E-3:37:20:8:12:30 0/0:29:3:0:3:18:16.67%:14:1.1429E-1:39:15:10:5:21 0/0:36:1:0:1:15:6.67%:21:5E-1:40:14:6:8:17 0/0:27:2:0:2:11:18.18%:10:2.381E-1:40:9:5:4:13 0/0:29:4:0:4:14:28.57%:6:4.8889E-2:40:10:5:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:1:0:1:21:4.76%:31:5E-1:41:20:5:15:25 0/0:36:1:0:1:13:7.69%:18:5E-1:39:12:6:6:15 0/0:0:0:0:0:16:0%:29:1E0:40:16:4:12:21 0/0:32:1:0:1:12:8.33%:14:5E-1:45:11:3:8:14 0/0:32:3:0:3:19:15.79%:17:1.1486E-1:39:16:6:10:23 0/0:34:2:0:2:14:14.29%:12:2.4074E-1:42:12:4:8:14 0/0:30:2:0:2:21:9.52%:25:2.439E-1:41:19:4:15:21 0/0:30:2:0:2:20:10%:21:2.4359E-1:36:18:4:14:20 MTB_anc 1145471 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|eno_Rv1023|gene1051|transcript|Transcript_gene1051|Coding|1/1|c.908A>G|p.Asp303Gly|908/1290|908/1290|303/429||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1145471A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1145471A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:47:0%:89:1E0:47:47:25:22:48 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:19 0/0:0:0:0:0:13:0%:25:1E0:52:13:7:6:13 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:28:0%:51:1E0:52:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:14:0%:25:1E0:51:14:8:6:14 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:23 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:26 0/0:0:0:0:0:16:0%:29:1E0:44:16:6:10:16 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 0/0:0:0:0:0:19:0%:37:1E0:42:19:6:13:20 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:20:0%:36:1E0:51:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:23 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:30:0%:55:1E0:50:30:19:11:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:58:0%:99:1E0:51:58:25:33:58 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:14:0%:25:1E0:46:14:9:5:14 0/0:0:0:0:0:14:0%:25:1E0:39:14:5:9:14 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:11:0%:22:1E0:49:11:6:5:11 0/0:0:0:0:0:31:0%:59:1E0:44:31:9:22:31 0/0:25:1:0:1:19:5.26%:28:5E-1:46:18:8:10:19 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:17 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:22 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:28 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:17 0/0:0:0:0:0:33:0%:63:1E0:50:33:14:19:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:18:0%:32:1E0:51:18:8:10:18 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:31:1:0:1:15:6.67%:21:5E-1:55:14:7:7:15 0/0:0:0:0:0:23:0%:44:1E0:55:23:8:15:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:24 0/0:0:0:0:0:18:0%:32:1E0:43:18:5:13:18 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:20 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:17:0%:33:1E0:53:17:6:11:18 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:19 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:19 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:10:0%:17:1E0:45:10:5:5:10 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:27 0/0:0:0:0:0:19:0%:37:1E0:50:19:5:14:20 0/0:0:0:0:0:16:0%:29:1E0:52:16:10:6:16 0/0:0:0:0:0:40:0%:74:1E0:38:40:21:19:43 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:9:0%:18:1E0:44:9:5:4:9 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:35:1:0:1:26:3.85%:38:5E-1:44:25:9:16:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:13:0%:25:1E0:49:13:8:5:13 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:24 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:13:0%:25:1E0:42:13:4:9:14 0/0:0:0:0:0:53:0%:99:1E0:41:53:23:30:53 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 0/0:0:0:0:0:15:0%:29:1E0:43:15:10:5:15 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:37 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:20:0%:36:1E0:37:20:16:4:21 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:22:8:31 0/0:0:0:0:0:19:0%:37:1E0:43:19:2:17:21 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:35 0/0:0:0:0:0:19:0%:37:1E0:49:19:7:12:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:18:0%:32:1E0:45:18:12:6:18 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:22 0/0:0:0:0:0:14:0%:25:1E0:52:14:8:6:15 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:26 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:36 MTB_anc 1148255 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv1026_Rv1026-kdpE_Rv1027c|gene1054-gene1055|intergenic_region|gene1054-gene1055|||n.1148255G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:52:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:51:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:37:19:18:38:97.37%:99:5.6582E-21:38:1:0:1:39 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:48:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:51:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:47:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:52:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:62:24:38:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:43:35:19:16:36:97.22%:99:8.3613E-20:30:1:0:1:36 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:52 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:60:29:31:60:100%:99:1.035E-35:0:0:0:0:61 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:17:12:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:38:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:41:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:61:37:24:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 MTB_anc 1148259 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv1026_Rv1026-kdpE_Rv1027c|gene1054-gene1055|intergenic_region|gene1054-gene1055|||n.1148259G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:63:33:30:63:100%:99:1.657E-37:0:0:0:0:63 1/1:52:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:18:17:36:97.22%:99:8.3613E-20:39:1:0:1:37 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:48:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:46:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:52:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:64:27:37:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:17:11:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:38:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:49:32:17:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:61:37:24:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 MTB_anc 1149498 . TA T . PASS AC=299;AF=0.997;AN=300;ANN=T|frameshift_variant|HIGH|kdpD_Rv1028c|gene1056|transcript|Transcript_gene1056|Coding|1/1|c.2188delT|p.Tyr730fs|2188/2583|2188/2583|730/860||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1149499delA||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1149499delA||||||;LOF=(kdpD_Rv1028c|gene1056|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:21:26:50:94%:99:2.3219E-25:34:3:2:1:50 1/1:51:24:10:14:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:44:44:24:20:43:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:25:10:15:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:34:24:10:35:91.89%:99:5.6582E-18:42:3:2:1:37 1/1:49:45:25:20:46:97.83%:99:1.1441E-25:60:1:0:1:46 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:12:15:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:32:15:17:33:96.97%:99:4.7095E-18:33:1:1:0:33 1/1:43:27:12:15:30:90%:99:4.6134E-14:39:3:1:2:30 1/1:44:45:18:27:45:97.83%:99:1.1441E-25:32:1:0:1:46 1/1:50:23:10:13:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:45:46:28:18:46:97.87%:99:2.9526E-26:35:1:0:1:47 1/1:45:23:9:14:25:92%:99:2.7767E-12:33:2:0:2:25 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:15:12:28:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:43:26:14:12:27:96.3%:99:1.4382E-14:33:1:1:0:27 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:29:14:15:29:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:49:39:21:18:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:45:34:12:22:37:91.89%:99:5.6582E-18:42:3:0:3:37 1/1:52:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:20:10:10:22:90.91%:98:1.3117E-10:30:2:2:0:22 1/1:46:26:14:12:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:25:9:36:94.44%:99:1.5887E-18:36:2:1:1:36 1/1:44:37:13:24:38:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:44:42:26:16:43:97.67%:99:6.6289E-24:46:1:0:1:44 1/1:44:28:12:16:30:93.33%:99:4.194E-15:33:2:1:1:30 1/1:45:41:19:22:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:30:11:19:31:93.75%:99:3.0612E-16:33:2:1:1:32 1/1:48:40:21:19:41:97.56%:99:9.8874E-23:50:1:0:1:41 1/1:42:44:17:27:44:97.78%:99:4.4304E-25:37:1:1:0:45 1/1:45:31:16:15:29:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:76:36:40:78:96.2%:99:3.8245E-42:33:3:2:1:79 1/1:46:41:24:17:42:97.62%:99:2.5612E-23:60:1:0:1:42 1/1:48:37:21:16:38:97.37%:99:5.6582E-21:35:1:1:0:38 1/1:42:33:18:15:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:38:17:21:40:92.68%:99:3.1178E-20:35:3:2:1:41 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:13:17:31:96.77%:99:6.8754E-17:32:1:1:0:31 1/1:43:32:13:19:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:46:23:23:47:97.87%:99:2.9526E-26:37:1:1:0:47 1/1:47:41:21:20:42:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:49:52:25:27:53:98.11%:99:8.609E-30:34:1:0:1:53 1/1:45:25:10:15:26:96.15%:99:5.4444E-14:32:1:1:0:26 1/1:41:36:15:21:34:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:35:18:17:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:19:17:35:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:44:26:18:45:97.78%:99:4.4304E-25:60:1:0:1:45 1/1:40:39:22:17:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:15:15:32:93.75%:99:3.0612E-16:47:2:1:1:32 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:30:18:12:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:47:32:17:15:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:17:21:39:97.44%:99:1.4697E-21:35:1:0:1:39 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:36:24:12:35:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:56:24:32:57:96.55%:99:2.8822E-31:34:2:1:1:58 1/1:46:24:11:13:26:92.31%:99:7.6222E-13:35:2:1:1:26 1/1:45:53:31:22:54:98.15%:99:2.2126E-30:36:1:0:1:54 0/1:44:17:8:9:19:89.47%:82:5.9414E-9:47:2:1:1:19 1/1:46:20:11:9:21:95.24%:99:4.0873E-11:34:1:1:0:21 1/1:47:36:20:16:36:97.3%:99:2.1762E-20:32:1:1:0:37 1/1:50:36:19:17:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:53:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:25:12:13:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:20:12:33:96.97%:99:4.7095E-18:35:1:1:0:33 1/1:53:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:30:17:13:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:52:19:33:53:98.11%:99:8.609E-30:46:1:0:1:53 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:27:16:11:30:90%:99:4.6134E-14:32:3:3:0:30 1/1:41:37:16:21:36:97.37%:99:5.6582E-21:32:1:1:0:38 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:24:15:9:23:96%:99:2.0568E-13:37:1:1:0:25 1/1:46:19:10:9:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:12:12:26:92.31%:99:7.6222E-13:47:2:1:1:26 1/1:48:32:21:11:32:96.97%:99:4.7095E-18:60:1:1:0:33 1/1:48:28:13:15:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:15:7:8:16:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:40:48:29:19:45:100%:99:1.554E-28:0:0:0:0:48 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:27:16:11:28:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:49:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:18:11:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:40:22:18:38:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:37:21:16:37:94.87%:99:3.0128E-20:36:2:1:1:39 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:27:15:12:29:93.1%:99:1.5465E-14:30:2:1:1:29 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:12:15:29:93.1%:99:1.5465E-14:34:2:0:2:29 1/1:45:25:12:13:25:96.15%:99:5.4444E-14:34:1:1:0:26 1/1:46:20:7:13:21:95.24%:99:4.0873E-11:24:1:1:0:21 1/1:41:20:11:9:21:95.24%:99:4.0873E-11:35:1:0:1:21 1/1:44:40:19:21:40:97.56%:99:9.8874E-23:35:1:1:0:41 1/1:41:34:17:17:34:97.14%:99:3.2089E-19:33:1:1:0:35 1/1:44:43:22:21:44:97.73%:99:1.7144E-24:34:1:1:0:44 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:36:20:16:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:60:35:25:59:100%:99:1.035E-35:0:0:0:0:60 1/1:43:44:24:20:46:95.65%:99:2.7459E-24:35:2:1:1:46 1/1:42:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:16:10:6:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:52:29:23:49:98.11%:99:8.609E-30:33:1:0:1:53 1/1:42:39:19:20:40:95.12%:99:3.8137E-22:33:1:0:1:41 1/1:40:40:17:23:40:95.24%:99:5.6346E-22:48:2:2:0:42 1/1:40:36:16:20:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:29:15:14:30:93.55%:99:1.1344E-15:31:2:0:2:32 1/1:42:43:23:20:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:39:18:21:39:97.5%:99:3.8137E-22:32:1:1:0:40 1/1:40:39:20:19:40:92.86%:99:8.4519E-21:29:3:2:1:42 1/1:39:52:26:26:51:98.11%:99:8.609E-30:36:1:1:0:53 1/1:40:38:21:17:38:95%:99:8.0088E-21:47:2:1:1:40 1/1:38:44:27:17:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:37:21:16:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:52:29:23:52:96.3%:99:6.1952E-29:36:2:2:0:54 1/1:42:46:25:21:45:97.87%:99:2.9526E-26:25:1:1:0:48 1/1:42:46:21:25:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:50:24:26:50:98.04%:99:1.3013E-28:34:1:1:0:51 1/1:41:40:20:20:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:28:14:14:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:10:15:27:92.59%:99:2.0853E-13:33:2:0:2:28 1/1:45:40:24:16:43:93.02%:99:5.6346E-22:34:2:2:0:43 1/1:43:44:23:21:45:95.65%:99:2.7459E-24:29:2:2:0:46 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:49:25:24:49:98%:99:5.0549E-28:36:1:0:1:50 1/1:40:47:23:24:47:95.92%:99:5.0044E-26:33:2:1:1:49 1/1:40:37:23:14:40:90.24%:99:3.5075E-19:33:4:2:2:41 MTB_anc 1153676 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|kdpA_Rv1029|gene1058|transcript|Transcript_gene1058|Coding|1/1|c.1665C>G|p.Phe555Leu|1665/1716|1665/1716|555/571||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1153676C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1153676C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:54:16:38:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:48:24:24:48:100%:99:1.554E-28:0:0:0:0:52 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:49:26:23:50:98%:99:5.0549E-28:60:1:0:1:51 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 MTB_anc 1155250 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|kdpB_Rv1030|gene1059|transcript|Transcript_gene1059|Coding|1/1|c.1527A>C|p.Ala509Ala|1527/2130|1527/2130|509/709||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1155250A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1155250A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:21:0%:40:1E0:52:21:11:10:22 0/0:0:0:0:0:51:0%:97:1E0:47:51:25:26:51 0/0:0:0:0:0:29:0%:55:1E0:52:29:18:11:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:19 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:21:6:27 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:25:0%:48:1E0:52:25:15:10:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:59:0%:99:1E0:41:59:36:23:62 0/0:0:0:0:0:17:0%:33:1E0:49:17:12:5:17 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:41 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:36:0%:66:1E0:47:36:22:14:39 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:26 0/0:0:0:0:0:27:0%:52:1E0:44:27:8:19:27 0/0:0:0:0:0:46:0%:85:1E0:47:46:17:29:46 0/0:0:0:0:0:37:0%:70:1E0:50:37:23:14:37 0/0:0:0:0:0:36:0%:66:1E0:50:36:14:22:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:24:0%:44:1E0:51:24:14:10:24 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:21 0/0:0:0:0:0:14:0%:25:1E0:51:14:5:9:14 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:35 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 0/0:0:0:0:0:30:0%:55:1E0:51:30:13:17:31 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:47:36:23:13:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:64:0%:99:1E0:48:64:24:40:64 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:24:11:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:41 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:27 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:46 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:27 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:41 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:46 0/0:0:0:0:0:53:0%:99:1E0:49:53:28:25:54 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:26 0/0:0:0:0:0:40:0%:74:1E0:46:40:24:16:40 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:21 0/0:0:0:0:0:49:0%:93:1E0:42:49:24:25:50 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:27 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:52 0/0:0:0:0:0:43:0%:82:1E0:47:43:25:18:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:45 0/0:0:0:0:0:15:0%:29:1E0:52:15:8:7:15 0/0:0:0:0:0:44:0%:81:1E0:49:44:22:22:45 0/0:0:0:0:0:54:0%:99:1E0:49:54:25:29:56 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:39 0/0:0:0:0:0:17:0%:33:1E0:47:17:4:13:18 0/0:0:0:0:0:31:0%:59:1E0:48:31:14:17:31 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:42 0/0:0:0:0:0:29:0%:55:1E0:50:29:16:13:29 0/0:0:0:0:0:21:0%:40:1E0:50:21:7:14:21 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:39 0/0:0:0:0:0:33:0%:63:1E0:45:33:10:23:33 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:45 0/0:0:0:0:0:34:0%:62:1E0:46:34:10:24:35 0/0:0:0:0:0:20:0%:36:1E0:52:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:47:34:22:12:34 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:30 0/0:0:0:0:0:39:0%:74:1E0:50:39:21:18:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:13:22:35 0/0:0:0:0:0:38:0%:70:1E0:49:38:17:21:38 0/0:0:0:0:0:54:0%:99:1E0:44:54:25:29:55 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:49 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:39 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:36 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:41 0/0:0:0:0:0:43:0%:82:1E0:43:43:28:15:43 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:42 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:61:0%:99:1E0:42:61:29:32:62 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:52 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:33 0/0:0:0:0:0:63:0%:99:1E0:39:63:33:30:64 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:47 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:53 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:45 0/0:0:0:0:0:56:0%:99:1E0:41:56:27:29:59 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:42 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:45 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:43 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:49:0%:93:1E0:39:49:24:25:50 0/0:0:0:0:0:42:0%:77:1E0:43:42:29:13:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:45:0%:85:1E0:37:45:24:21:45 0/0:0:0:0:0:39:0%:74:1E0:48:39:20:19:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:0:0:0:0:52:0%:96:1E0:42:52:30:22:52 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:45 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:44:0%:81:1E0:46:44:28:16:44 0/0:37:1:0:1:39:2.56%:62:5E-1:42:38:22:16:39 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:19:0%:37:1E0:44:19:13:6:19 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:54 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:44 MTB_anc 1159592 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1159592G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1159592G>A||||||,A|intergenic_region|MODIFIER|trcR_Rv1033c-esxI_Rv1037c|gene1062-gene1063|intergenic_region|gene1062-gene1063|||n.1159592G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:36:38:13:25:39 0/0:0:0:0:0:17:0%:33:1E0:41:17:9:8:17 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:36 0/0:0:0:0:0:13:0%:25:1E0:39:13:4:9:14 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:28 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:18 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:14:0%:25:1E0:36:14:2:12:14 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:17 0/0:38:1:1:0:23:4.35%:34:5E-1:43:22:4:18:23 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:36:33:11:22:33 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:16 0/0:0:0:0:0:36:0%:66:1E0:37:36:12:24:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:27 0/0:0:0:0:0:12:0%:21:1E0:40:12:2:10:13 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:22 0/0:0:0:0:0:17:0%:33:1E0:39:17:5:12:17 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:20 0/0:0:0:0:0:38:0%:70:1E0:37:38:14:24:39 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:24 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:20 0/0:0:0:0:0:16:0%:29:1E0:41:16:4:12:17 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:18 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:15:27:43 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:34 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:25:0%:48:1E0:38:25:8:17:26 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:27 0/0:0:0:0:0:40:0%:74:1E0:37:40:20:20:42 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:46 0/0:0:0:0:0:40:0%:74:1E0:37:40:17:23:40 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:36 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:28 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:37 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:19 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:38:31:10:21:31 0/0:0:0:0:0:44:0%:81:1E0:37:44:18:26:45 0/0:60:1:1:0:25:4%:38:5E-1:41:24:10:14:25 0/0:0:0:0:0:10:0%:17:1E0:40:10:5:5:10 0/0:0:0:0:0:45:0%:85:1E0:40:45:17:28:46 0/0:0:0:0:0:17:0%:33:1E0:40:17:12:5:18 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:29 0/0:0:0:0:0:21:0%:40:1E0:37:21:4:17:22 0/0:0:0:0:0:43:0%:82:1E0:38:43:15:28:45 0/0:0:0:0:0:33:0%:63:1E0:37:33:12:21:33 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:24 0/0:0:0:0:0:48:0%:89:1E0:40:48:22:26:50 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:23 0/0:0:0:0:0:38:0%:70:1E0:38:38:19:19:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:8:20:28 0/0:0:0:0:0:41:0%:78:1E0:39:41:20:21:41 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:60:1:0:1:14:7.14%:17:5E-1:45:13:6:7:14 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:36:0%:66:1E0:37:36:16:20:39 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:43 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:26 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 0/0:0:0:0:0:32:0%:59:1E0:38:32:10:22:33 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:25 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:26 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:37:1:1:0:22:4.55%:31:5E-1:41:21:9:12:24 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:41:0%:78:1E0:36:41:22:19:41 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:32 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:40 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:7:19:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:37:0%:70:1E0:41:37:8:29:37 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:22 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:5:17:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:27 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:16 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:31 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:23 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:18 0/0:0:0:0:0:42:0%:77:1E0:37:42:16:26:42 0/0:0:0:0:0:21:0%:40:1E0:35:21:7:14:23 0/0:0:0:0:0:33:0%:63:1E0:36:33:13:20:34 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:31 0/0:0:0:0:0:34:0%:62:1E0:37:34:9:25:35 0/0:0:0:0:0:15:0%:29:1E0:34:15:5:10:17 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:34 0/0:0:0:0:0:47:0%:89:1E0:39:47:16:31:48 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:29 0/0:0:0:0:0:18:0%:32:1E0:36:18:6:12:19 0/0:0:0:0:0:37:0%:70:1E0:37:37:11:26:38 0/0:0:0:0:0:29:0%:55:1E0:37:29:7:22:30 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:10:18:28 0/0:0:0:0:0:22:0%:40:1E0:35:22:6:16:24 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:25:0%:48:1E0:36:25:13:12:25 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:35:0%:67:1E0:36:35:11:24:39 0/0:0:0:0:0:17:0%:33:1E0:35:17:6:11:17 0/0:0:0:0:0:31:0%:59:1E0:36:31:15:16:34 0/0:0:0:0:0:17:0%:33:1E0:36:17:4:13:18 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:22 0/0:0:0:0:0:37:0%:70:1E0:37:37:14:23:37 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:30 0/0:0:0:0:0:45:0%:85:1E0:37:45:16:29:45 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:18 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:16 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:20 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:34 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:28 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:5:14:19 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:36 0/0:34:1:0:1:41:2.44%:66:5E-1:37:40:13:27:43 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 MTB_anc 1160542 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|intergenic_region|MODIFIER|trcR_Rv1033c-esxI_Rv1037c|gene1062-gene1063|intergenic_region|gene1062-gene1063|||n.1160542C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:45:45:17:28:45 0/0:0:0:0:0:11:0%:22:1E0:54:11:4:7:11 0/0:0:0:0:0:53:0%:99:1E0:45:53:25:28:53 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:34 0/0:0:0:0:0:35:0%:67:1E0:49:35:24:11:35 0/0:0:0:0:0:22:0%:40:1E0:49:22:9:13:22 0/0:0:0:0:0:36:0%:66:1E0:51:36:20:16:36 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:24 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:21:0%:40:1E0:51:21:10:11:21 0/0:0:0:0:0:61:0%:99:1E0:46:61:33:28:62 0/0:0:0:0:0:19:0%:37:1E0:39:19:15:4:19 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:47 0/0:0:0:0:0:32:0%:59:1E0:47:32:22:10:32 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:25:0%:48:1E0:51:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:35 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:34 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:42:0%:78:1E0:44:41:21:20:42 0/0:0:0:0:0:59:0%:99:1E0:47:59:29:30:61 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:41:0%:78:1E0:47:41:18:23:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:51:0%:97:1E0:46:51:29:22:52 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:27 0/0:0:0:0:0:46:0%:85:1E0:45:46:21:25:46 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:35 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:43 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:37 0/0:0:0:0:0:44:0%:81:1E0:48:44:16:28:45 0/0:0:0:0:0:20:0%:36:1E0:50:20:16:4:21 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:32 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:24 0/0:0:0:0:0:19:0%:37:1E0:53:19:6:13:20 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:40 0/0:33:1:0:1:24:4.17%:34:5E-1:43:23:16:7:24 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:47 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:50:0%:92:1E0:43:50:29:21:51 0/0:0:0:0:0:34:0%:62:1E0:46:34:23:11:34 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:42 0/0:0:0:0:0:56:0%:99:1E0:48:56:34:22:56 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:40:0%:74:1E0:48:40:25:15:40 0/0:0:0:0:0:18:0%:32:1E0:52:18:11:7:18 0/0:0:0:0:0:14:0%:25:1E0:47:14:7:7:14 0/0:0:0:0:0:34:0%:62:1E0:48:34:11:23:35 0/0:0:0:0:0:49:0%:93:1E0:51:49:20:29:49 0/0:39:1:1:0:14:7.14%:17:5E-1:48:13:4:9:14 0/0:0:0:0:0:32:0%:59:1E0:48:32:12:20:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:32 0/1:44:7:4:3:33:21.21%:22:5.4855E-3:46:26:13:13:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:49:39:16:23:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:33:1:0:1:33:3.03%:52:5E-1:42:32:17:15:33 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:20 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:51:29:10:19:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:21 0/0:0:0:0:0:21:0%:40:1E0:47:21:7:14:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:39:1:0:1:30:3.33%:44:5E-1:48:29:20:9:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:36 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:21 0/0:0:0:0:0:38:0%:70:1E0:40:38:14:24:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:26:11:38 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:36 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:42 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:37 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:23:0%:44:1E0:52:23:15:8:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:41:0%:78:1E0:45:41:25:16:41 0/0:0:0:0:0:37:0%:70:1E0:49:37:24:13:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:60:1:0:1:41:2.44%:66:5E-1:46:40:19:21:41 0/0:60:1:1:0:30:3.33%:44:5E-1:46:29:13:16:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:21:9:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:29:16:47 0/0:38:1:1:0:43:2.33%:70:5E-1:40:42:19:23:44 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:53 0/0:38:1:1:0:27:3.7%:41:5E-1:45:26:13:13:28 0/0:0:0:0:0:62:0%:99:1E0:45:62:30:32:63 0/0:0:0:0:0:50:0%:92:1E0:42:50:18:32:50 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:43:0%:82:1E0:40:43:27:16:43 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:34 0/0:0:0:0:0:57:0%:99:1E0:40:57:25:32:60 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:44 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:51:0%:97:1E0:43:51:31:20:51 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:43 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:44 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:41 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:46 0/0:0:0:0:0:52:0%:96:1E0:45:52:30:22:52 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:45 0/0:0:0:0:0:50:0%:92:1E0:41:50:22:28:52 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:49 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:40 0/0:0:0:0:0:57:0%:99:1E0:42:57:26:31:58 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:54 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 MTB_anc 1160770 . A T . PASS AC=266;AF=1.00;AN=266;ANN=T|missense_variant|MODERATE|esxI_Rv1037c|gene1063|transcript|Transcript_gene1063|Coding|1/1|c.59T>A|p.Leu20Gln|59/285|59/285|20/94||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1160770A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1160770A>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:15:8:7:16:93.75%:75:2.8282E-8:37:1:1:0:16 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:14:8:6:15:93.33%:69:1.0315E-7:37:1:0:1:15 1/1:36:16:10:6:17:94.12%:81:7.7134E-9:33:1:0:1:17 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:18:8:10:19:94.74%:92:5.6585E-10:38:1:0:1:19 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:19:10:9:20:95%:98:1.5234E-10:39:1:0:1:20 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 MTB_anc 1164571 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|intergenic_region|MODIFIER|PE8_Rv1040c-Rv1041c_Rv1041c|gene1066-gene1067|intergenic_region|gene1066-gene1067|||n.1164571A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:30 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:22 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:16:8:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:21:0%:40:1E0:46:21:14:7:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:29 0/0:0:0:0:0:55:0%:99:1E0:42:55:24:31:56 0/0:0:0:0:0:22:0%:40:1E0:50:22:14:8:23 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:42 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:24:0%:44:1E0:45:24:20:4:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:27 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:48 0/0:0:0:0:0:22:0%:40:1E0:52:22:12:10:22 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:39 0/0:0:0:0:0:57:0%:99:1E0:48:57:33:24:59 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:55:0%:99:1E0:43:55:32:23:55 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:52:0%:96:1E0:43:52:31:21:53 0/0:0:0:0:0:27:0%:52:1E0:45:27:18:9:30 0/0:0:0:0:0:49:0%:93:1E0:48:49:27:22:50 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:47 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:51 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:25 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:48 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:17:28:45 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:26 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:40 0/0:0:0:0:0:51:0%:97:1E0:46:51:25:26:51 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:38 0/0:0:0:0:0:30:0%:55:1E0:49:30:19:11:30 0/0:0:0:0:0:13:0%:25:1E0:48:13:5:8:13 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:40 0/0:0:0:0:0:47:0%:89:1E0:41:47:29:18:47 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:27 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:32 0/0:0:0:0:0:38:0%:70:1E0:52:38:14:24:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:48:0%:89:1E0:47:48:20:28:50 0/0:0:0:0:0:36:0%:66:1E0:45:36:12:24:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:38:1:0:1:31:3.23%:48:5E-1:45:30:13:17:31 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:23 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:43:0%:82:1E0:40:43:26:17:43 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:35 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:47 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:38 0/0:0:0:0:0:39:0%:74:1E0:39:39:17:22:40 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:7:20:28 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:23:0%:44:1E0:46:23:6:17:23 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:31 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:44 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:47 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:27 0/0:36:1:1:0:37:2.7%:59:5E-1:40:36:21:15:38 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:35 0/0:0:0:0:0:55:0%:99:1E0:43:55:28:27:56 0/0:0:0:0:0:58:0%:99:1E0:41:58:25:33:59 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:33 0/0:0:0:0:0:49:0%:93:1E0:40:49:23:26:56 0/0:0:0:0:0:55:0%:99:1E0:39:55:27:28:55 0/0:0:0:0:0:63:0%:99:1E0:43:63:31:32:63 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:44 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:56 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:42 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:50:0%:92:1E0:43:50:22:28:53 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:45 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:47 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:45 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:51:0%:97:1E0:43:51:28:23:52 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 MTB_anc 1164613 . G T . PASS AC=176;AF=0.587;AN=300;ANN=T|missense_variant|MODERATE|Rv1041c_Rv1041c|gene1067|transcript|Transcript_gene1067|Coding|1/1|c.823C>A|p.His275Asn|823/864|823/864|275/287||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1164613G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1164613G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:16 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:17:0%:33:1E0:51:17:11:6:17 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:20:0%:36:1E0:45:20:15:5:20 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 1/1:46:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:15 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:36 1/1:43:23:11:12:24:95.83%:99:7.7525E-13:33:1:1:0:26 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:15:0%:29:1E0:41:15:9:6:15 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:45 0/0:0:0:0:0:16:0%:29:1E0:49:16:10:6:16 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:34 0/0:60:1:0:1:31:3.23%:48:5E-1:44:30:20:10:31 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:22:0%:40:1E0:45:22:16:6:22 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:40 1/1:52:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:49:0%:93:1E0:48:49:28:21:49 1/1:44:28:16:12:29:96.55%:99:9.9776E-16:38:1:1:0:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:46 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:21 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:24 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:21:9:30 1/1:41:20:9:11:21:95.24%:99:4.0873E-11:60:1:0:1:21 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:46 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:40 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:60:1:1:0:22:4.55%:31:5E-1:44:21:14:7:22 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:36 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:22 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:41 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 1/1:41:32:14:18:33:96.97%:99:4.7095E-18:60:1:0:1:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:12:24:36 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:19:0%:37:1E0:50:19:13:6:19 0/0:37:1:1:0:19:5.26%:28:5E-1:44:18:11:7:19 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:11:0%:22:1E0:48:11:4:7:11 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:52:33:13:20:33 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:16:0%:29:1E0:40:16:10:6:16 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:10:23:33 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:28:12:16:29:96.55%:99:9.9776E-16:38:1:0:1:30 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:22 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:18:0%:32:1E0:47:18:7:11:18 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:28 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:38:1:1:0:29:3.45%:45:5E-1:41:28:12:16:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:41 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:32 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:18:4:14:19:94.74%:92:5.6585E-10:38:1:0:1:19 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:20:10:10:21:95.24%:99:4.0873E-11:37:1:0:1:22 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:31:11:20:34:91.18%:99:2.7308E-16:44:3:2:1:36 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:47 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:41 1/1:41:39:22:17:40:97.5%:99:3.8137E-22:60:1:0:1:40 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:46 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 MTB_anc 1165114 . T C . PASS AC=4;AF=1.00;AN=4;ANN=C|missense_variant|MODERATE|Rv1041c_Rv1041c|gene1067|transcript|Transcript_gene1067|Coding|1/1|c.322A>G|p.Asn108Asp|322/864|322/864|108/287||,C|missense_variant|MODERATE|Rv1042c_Rv1042c|gene1068|transcript|Transcript_gene1068|Coding|1/1|c.386A>G|p.Glu129Gly|386/408|386/408|129/135||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1165114T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1165114T>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 1165193 . C T . PASS AC=4;AF=0.143;AN=28;ANN=T|missense_variant|MODERATE|Rv1042c_Rv1042c|gene1068|transcript|Transcript_gene1068|Coding|1/1|c.307G>A|p.Val103Met|307/408|307/408|103/135||,T|synonymous_variant|LOW|Rv1041c_Rv1041c|gene1067|transcript|Transcript_gene1067|Coding|1/1|c.243G>A|p.Arg81Arg|243/864|243/864|81/287||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1165193C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1165193C>T||||||;HET=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:7:0%:14:1E0:38:7:5:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:37:9:7:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:36:10:7:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:37:8:7:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:37:7:6:1:7 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:38:8:6:2:8 1/1:37:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:38:8:6:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:38:7:6:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:8:0%:14:1E0:37:8:7:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 1165521 . T TA . PASS AC=300;AF=1.00;AN=300;ANN=TA|intergenic_region|MODIFIER|Rv1042c_Rv1042c-Rv1043c_Rv1043c|gene1068-gene1069|intergenic_region|gene1068-gene1069|||n.1165521_1165522insA||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:26:12:14:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:16:10:6:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:46:27:14:13:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:41:29:18:11:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:16:9:25:96.15%:99:5.4444E-14:24:1:1:0:26 1/1:40:25:14:11:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:19:8:11:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:27:13:14:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:18:18:37:97.3%:99:2.1762E-20:33:1:1:0:37 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:29:22:7:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:19:9:10:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:24:12:12:21:100%:99:3.101E-14:0:0:0:0:24 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:17:13:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:21:11:10:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:23:11:12:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:22:10:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:21:13:8:19:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:22:8:14:21:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:11:15:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:27:11:16:24:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:20:14:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:16:7:9:17:94.12%:81:7.7134E-9:37:1:1:0:17 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:24:8:16:23:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:22:9:13:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:14:14:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:28:13:15:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:10:12:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:18:7:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:22:14:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:19:12:7:19:95%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:8:11:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:32:16:16:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:20:10:10:20:95.24%:99:4.0873E-11:24:1:1:0:21 1/1:43:19:11:8:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:17:13:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:28:16:12:28:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:15:22:35:97.37%:99:5.6582E-21:39:1:1:0:38 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:20:8:12:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:27:15:12:27:96.43%:99:3.7915E-15:24:1:1:0:28 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:15:8:7:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:26:12:14:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:11:16:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:34:18:16:34:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:39:31:18:13:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:19:9:10:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:37:27:10:36:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:39:42:25:17:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:11:13:23:100%:99:3.101E-14:0:0:0:0:24 1/1:39:44:27:17:42:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:31:20:11:32:96.88%:99:1.8007E-17:27:1:0:1:32 1/1:38:48:34:14:47:100%:99:1.554E-28:0:0:0:0:48 1/1:37:36:20:16:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:26:16:10:23:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:40:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:39:23:13:10:22:95.83%:99:7.7525E-13:33:1:1:0:24 1/1:37:33:19:14:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:31:12:19:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:19:13:6:19:95%:98:1.5234E-10:37:1:1:0:20 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:44:31:13:42:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:38:22:16:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:40:22:18:38:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:23:9:14:21:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:32:15:17:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:50:30:20:49:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:37:15:22:36:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 1168718 . T TC . PASS AC=300;AF=1.00;AN=300;ANN=TC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1168718_1168719insC||||||,TC|custom|MODIFIER|||CUSTOM&additionnal_annotations|unknown|||n.1168718_1168719insC||||||,TC|intergenic_region|MODIFIER|Rv1045_Rv1045-Rv1047_Rv1047|gene1071-gene1072|intergenic_region|gene1071-gene1072|||n.1168718_1168719insC||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:28:10:18:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:19:8:11:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:42:44:24:20:45:97.78%:99:4.4304E-25:34:1:0:1:45 1/1:44:30:18:12:31:96.77%:99:6.8754E-17:36:1:0:1:31 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:29:10:19:29:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:29:18:11:30:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:47:30:14:16:28:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:14:15:29:96.67%:99:2.6212E-16:35:1:0:1:30 1/1:42:50:25:25:49:100%:99:9.9117E-30:0:0:0:0:50 1/1:55:20:9:11:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:43:49:24:25:48:100%:99:3.925E-29:0:0:0:0:49 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:21:14:35:94.59%:99:8.3613E-20:60:1:0:1:37 1/1:43:24:13:11:25:96%:99:2.0568E-13:34:1:0:1:25 1/1:45:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:12:13:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:47:25:22:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:40:18:22:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:19:12:7:21:90.48%:93:4.7003E-10:36:2:1:1:21 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:14:10:23:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:26:12:14:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:16:21:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:12:13:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:33:19:14:35:94.29%:99:5.9366E-18:46:2:1:1:35 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:35:18:17:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:40:22:18:41:97.56%:99:9.8874E-23:38:1:0:1:41 1/1:40:34:21:13:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:67:30:37:68:98.53%:99:1.1598E-38:35:1:0:1:68 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:37:24:13:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:43:27:16:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:24:8:16:23:96%:99:3.101E-14:0:0:0:0:25 1/1:41:26:18:8:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:22:14:8:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:32:20:12:33:96.97%:99:4.7095E-18:60:1:1:0:33 1/1:40:24:16:8:24:96%:99:2.0568E-13:34:1:0:1:25 1/1:44:39:21:18:39:97.5%:99:3.8137E-22:33:1:1:0:40 1/1:42:43:17:26:43:95.56%:99:1.0412E-23:36:2:2:0:45 1/1:47:43:23:20:43:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:35:21:14:35:97.22%:99:8.3613E-20:33:1:0:1:36 1/1:43:17:7:10:15:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:36:19:17:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:33:15:18:34:97.06%:99:1.2301E-18:32:1:0:1:34 1/1:39:53:21:32:52:98.15%:99:2.2126E-30:32:1:0:1:54 1/1:46:27:13:14:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:42:24:15:9:24:96%:99:3.101E-14:0:0:0:0:24 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:17:14:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:20:13:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:15:15:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:47:31:13:18:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:48:36:21:15:38:94.74%:99:2.1762E-20:32:1:0:1:38 1/1:46:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:21:10:11:21:95.45%:99:1.8578E-12:0:0:0:0:21 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:38:17:21:37:97.44%:99:1.4697E-21:32:1:0:1:39 1/1:46:23:11:12:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:40:29:17:12:31:93.55%:99:1.1344E-15:34:2:1:1:31 1/1:45:34:17:17:34:97.14%:99:3.2089E-19:33:1:0:1:35 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:15:11:23:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:38:17:21:40:95%:99:8.0088E-21:47:2:0:2:40 1/1:44:38:26:12:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:33:15:18:30:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:36:18:18:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:32:14:18:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:18:7:11:18:94.74%:92:5.6585E-10:33:1:1:0:19 1/1:44:38:21:17:37:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:46:29:15:14:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:47:21:26:49:94%:99:5.0044E-26:35:2:1:1:50 1/1:43:23:12:11:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:49:21:28:48:100%:99:3.925E-29:0:0:0:0:49 1/1:48:33:17:16:34:97.06%:99:1.2301E-18:32:1:0:1:34 1/1:43:49:28:21:48:100%:99:3.925E-29:0:0:0:0:49 1/1:45:30:23:7:31:96.77%:99:6.8754E-17:34:1:1:0:31 1/1:42:27:16:11:28:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:32:13:19:29:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:10:13:24:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:41:32:16:16:32:96.97%:99:4.7095E-18:32:1:1:0:33 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:24:10:14:22:100%:99:3.101E-14:0:0:0:0:24 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:22:15:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:36:16:20:36:97.3%:99:2.1762E-20:32:1:1:0:37 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:16:18:35:97.14%:99:3.2089E-19:38:1:0:1:35 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:24:13:11:24:96%:99:2.0568E-13:37:1:1:0:25 1/1:45:31:16:15:33:93.94%:99:8.2416E-17:47:2:1:1:33 1/1:40:42:18:24:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:42:21:21:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:32:15:17:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:14:18:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:45:27:18:45:97.83%:99:1.1441E-25:33:1:1:0:46 1/1:45:53:28:25:52:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:30:21:9:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:12:15:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:47:26:21:49:94%:99:2.3219E-25:31:3:0:3:51 1/1:38:46:23:23:42:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:53:21:32:52:98.15%:99:2.2126E-30:30:1:0:1:54 1/1:40:37:15:22:37:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:36:35:18:17:35:97.22%:99:8.3613E-20:34:1:1:0:36 1/1:41:32:16:16:33:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:40:47:25:22:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:31:15:16:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:24:8:16:23:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:24:15:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:38:19:19:37:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:38:55:30:25:57:96.49%:99:1.1048E-30:37:2:0:2:57 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:35:15:20:36:97.22%:99:8.3613E-20:35:1:0:1:36 1/1:41:38:14:24:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:35:13:22:31:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:19:16:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:37:17:20:39:94.87%:99:3.0128E-20:47:2:1:1:39 1/1:46:48:26:22:49:97.96%:99:1.9625E-27:36:1:1:0:49 1/1:41:34:17:17:32:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 1182755 . C T . PASS AC=68;AF=0.227;AN=300;ANN=T|missense_variant|MODERATE|Rv1059_Rv1059|gene1082|transcript|Transcript_gene1082|Coding|1/1|c.365C>T|p.Ala122Val|365/1065|365/1065|122/354||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1182755C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1182755C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:44:49:22:27:49 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/0:0:0:0:0:52:0%:96:1E0:45:52:26:26:54 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:29 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:38:1:1:0:26:3.85%:38:5E-1:46:25:18:7:26 1/1:50:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:35:1:1:0:48:2.08%:76:5E-1:44:47:23:24:49 0/0:60:1:1:0:22:4.55%:31:5E-1:51:21:10:11:22 0/0:0:0:0:0:47:0%:89:1E0:46:47:30:17:49 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:24 1/1:40:27:19:8:29:93.1%:99:1.5465E-14:38:2:1:1:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:54 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:20 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 1/1:51:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 1/1:46:26:13:13:27:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:38:0%:70:1E0:46:37:17:20:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:36 0/0:0:0:0:0:30:0%:55:1E0:48:30:11:19:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:50 0/0:0:0:0:0:52:0%:96:1E0:47:52:29:23:52 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:49 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:19 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:49 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:45:0%:85:1E0:46:45:22:23:45 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:32 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:30 0/0:0:0:0:0:46:0%:85:1E0:47:46:25:21:47 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:60:1:1:0:30:3.33%:44:5E-1:50:29:14:15:30 1/1:44:30:17:13:31:96.77%:99:6.8754E-17:34:1:1:0:32 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:56:36:20:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:38 1/1:54:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:14:0%:25:1E0:51:14:7:7:14 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:28 0/0:0:0:0:0:25:0%:48:1E0:52:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:39:1:1:0:25:4%:38:5E-1:46:24:9:15:25 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:28 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:45 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:50:0%:92:1E0:45:50:25:25:51 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:33 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:44 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:31 0/0:0:0:0:0:37:0%:70:1E0:47:37:23:14:37 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:49:34:11:23:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:28:0%:52:1E0:38:27:14:13:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:27:15:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:32:14:46 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:56 1/1:41:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 1/1:40:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:49 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:50:0%:92:1E0:43:50:29:21:52 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:40 0/0:0:0:0:0:45:0%:85:1E0:40:45:27:18:45 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:29 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:51 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:38:1:0:1:66:1.52%:99:5E-1:40:65:28:37:67 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:52:0%:96:1E0:44:52:27:25:53 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:41:0%:78:1E0:38:41:22:19:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:54:0%:99:1E0:45:54:22:32:55 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:35 MTB_anc 1189578 . T G . PASS AC=36;AF=1.00;AN=36;ANN=G|missense_variant|MODERATE|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.847A>C|p.Lys283Gln|847/2004|847/2004|283/667||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189578T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189578T>G||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./. 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. MTB_anc 1189580 . G C . PASS AC=20;AF=1.00;AN=20;ANN=C|missense_variant|MODERATE|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.845C>G|p.Thr282Arg|845/2004|845/2004|282/667||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189580G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189580G>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./. 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:6:6:0:7:100%:29:1.0823E-3:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. MTB_anc 1189581 . T C . PASS AC=26;AF=1.00;AN=26;ANN=C|missense_variant|MODERATE|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.844A>G|p.Thr282Ala|844/2004|844/2004|282/667||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189581T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189581T>C||||||;HET=0;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./. 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:8:0:9:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. MTB_anc 1189582 . A G . PASS AC=20;AF=1.00;AN=20;ANN=G|synonymous_variant|LOW|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.843T>C|p.Asp281Asp|843/2004|843/2004|281/667||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189582A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189582A>G||||||;HET=0;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:7:0:8:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. MTB_anc 1189583 . T C . PASS AC=22;AF=1.00;AN=22;ANN=C|missense_variant|MODERATE|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.842A>G|p.Asp281Gly|842/2004|842/2004|281/667||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189583T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189583T>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:32:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:7:0:8:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. MTB_anc 1189829 . T G . PASS AC=123;AF=0.992;AN=124;ANN=G|missense_variant|MODERATE|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.596A>C|p.His199Pro|596/2004|596/2004|199/667||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189829T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189829T>G||||||;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:31:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:14:12:2:15:100%:76:2.4927E-8:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:32:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:14:12:2:15:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:7:4:3:9:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:15:12:3:16:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:32:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:5:2:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:33:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:9:6:3:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:9:8:1:10:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:32:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:32:8:6:2:10:100%:41:7.77E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:6:5:1:7:100%:29:1.0823E-3:0:0:0:0:8 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:33:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:31:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:8:8:0:9:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 0/1:38:7:6:1:8:87.5%:31:6.993E-4:24:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 1189836 . G C . PASS AC=72;AF=1.00;AN=72;ANN=C|missense_variant|MODERATE|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.589C>G|p.Pro197Ala|589/2004|589/2004|197/667||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189836G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189836G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:7:6:1:8:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:14:12:2:15:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:9:8:1:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:32:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:6:4:2:7:100%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:7:0:8:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:6:6:0:8:100%:29:1.0823E-3:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:6:5:1:7:100%:29:1.0823E-3:0:0:0:0:7 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:32:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 1189837 . T G . PASS AC=55;AF=0.982;AN=56;ANN=G|synonymous_variant|LOW|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.588A>C|p.Pro196Pro|588/2004|588/2004|196/667||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189837T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189837T>G||||||;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:14:12:2:15:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:6:1:8:100%:35:2.9138E-4:0:0:0:0:10 0/1:37:7:6:1:8:87.5%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 1/1:32:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:6:4:2:7:100%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:6:6:0:7:100%:29:1.0823E-3:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:5:5:0:7:100%:24:3.9683E-3:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:6:5:1:7:100%:29:1.0823E-3:0:0:0:0:7 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 1189838 . G C . PASS AC=63;AF=0.926;AN=68;ANN=C|missense_variant|MODERATE|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.587C>G|p.Pro196Arg|587/2004|587/2004|196/667||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189838G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189838G>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:33:7:6:1:8:87.5%:31:6.993E-4:24:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:12:2:15:93.33%:69:1.0315E-7:26:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:8:1:10:90%:42:5.9538E-5:37:1:0:1:10 1/1:39:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:44:6:4:2:7:85.71%:26:2.331E-3:31:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:34:8:8:0:9:88.89%:36:2.0568E-4:36:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:6:6:0:8:75%:24:3.4965E-3:33:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:6:5:1:7:85.71%:26:2.331E-3:38:1:0:1:7 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 1189839 . G C . PASS AC=64;AF=0.914;AN=70;ANN=C|missense_variant|MODERATE|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.586C>G|p.Pro196Ala|586/2004|586/2004|196/667||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1189839G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1189839G>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:12:2:15:93.33%:69:1.0315E-7:31:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:9:8:1:10:90%:42:5.9538E-5:38:1:0:1:10 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:44:6:4:2:7:85.71%:26:2.331E-3:37:1:1:0:7 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:8:8:0:9:88.89%:36:2.0568E-4:31:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:8:8:0:9:88.89%:36:2.0568E-4:36:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:6:6:0:7:85.71%:26:2.331E-3:28:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:6:6:0:8:75%:24:3.4965E-3:32:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:40:6:5:1:7:85.71%:26:2.331E-3:38:1:0:1:7 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 1190017 . A G . PASS AC=237;AF=0.829;AN=286;ANN=G|synonymous_variant|LOW|PE_PGRS19_Rv1067c|gene1090|transcript|Transcript_gene1090|Coding|1/1|c.408T>C|p.Tyr136Tyr|408/2004|408/2004|136/667||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1190017A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1190017A>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:41:24:11:13:31:77.42%:99:2.7115E-11:36:7:1:6:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:42:19:8:11:24:79.17%:84:3.6826E-9:45:5:2:3:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:44:20:7:13:23:86.96%:95:3.1579E-10:50:3:1:2:25 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:16:5:11:17:94.12%:81:7.7134E-9:74:1:1:0:18 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:11:4:7:12:91.67%:53:4.8074E-6:37:1:0:1:12 0/1:47:15:8:7:17:88.24%:71:7.3277E-8:37:2:1:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:28:10:18:30:93.33%:99:4.194E-15:35:2:0:2:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:29:14:15:35:82.86%:99:4.008E-14:50:6:2:4:37 1/1:43:22:10:12:24:91.67%:99:1.0078E-11:38:2:1:1:24 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:10:5:5:11:90.91%:47:1.7011E-5:38:1:0:1:11 0/1:39:11:9:2:15:73.33%:46:2.4988E-5:35:4:1:3:16 1/1:45:15:8:7:16:93.75%:75:2.8282E-8:39:1:0:1:16 1/1:42:23:13:10:24:95.83%:99:7.7525E-13:39:1:0:1:25 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:40:13:5:8:16:81.25%:57:1.6121E-6:38:3:0:3:19 1/1:41:32:17:15:35:91.43%:99:7.5196E-17:34:3:0:3:36 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:43:9:5:4:12:75%:37:1.6826E-4:38:3:1:2:12 1/1:37:10:3:7:11:90.91%:47:1.7011E-5:39:1:0:1:11 0/1:40:12:5:7:16:75%:50:8.0605E-6:56:4:3:1:18 0/1:38:17:4:13:19:89.47%:82:5.9414E-9:38:2:1:1:19 0/1:41:23:15:8:27:85.19%:99:1.6161E-11:39:4:1:3:27 0/1:38:13:4:9:18:72.22%:54:3.7078E-6:37:5:1:4:20 1/1:43:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:15:9:6:16:93.75%:75:2.8282E-8:39:1:0:1:17 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:23:11:12:24:95.83%:99:7.7525E-13:38:1:0:1:24 1/1:43:19:12:7:21:90.48%:93:4.7003E-10:38:2:1:1:21 1/1:45:16:10:6:17:94.12%:81:7.7134E-9:76:1:1:0:18 1/1:42:29:13:16:31:93.55%:99:1.1344E-15:57:2:1:1:32 1/1:40:24:12:12:25:96%:99:2.0568E-13:38:1:0:1:25 1/1:43:24:8:16:26:96%:99:2.0568E-13:39:1:0:1:26 1/1:43:19:12:7:20:95%:98:1.5234E-10:39:1:0:1:20 1/1:39:14:8:6:15:93.33%:69:1.0315E-7:37:1:0:1:15 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 0/1:40:20:10:10:23:86.96%:95:3.1579E-10:49:3:1:2:25 0/1:37:19:10:9:25:76%:82:5.8245E-9:44:6:1:5:26 0/1:44:17:9:8:19:89.47%:82:5.9414E-9:55:2:1:1:20 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:28:15:13:29:96.55%:99:9.9776E-16:38:1:0:1:29 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:28:10:18:36:77.78%:99:4.0051E-13:37:8:2:6:36 1/1:40:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 0/1:38:16:8:8:19:84.21%:73:4.357E-8:37:3:0:3:19 0/1:41:12:7:5:14:85.71%:55:2.9913E-6:52:2:1:1:15 0/1:40:19:11:8:22:86.36%:89:1.0931E-9:38:3:0:3:22 1/1:41:26:12:14:27:96.3%:99:1.4382E-14:39:1:0:1:27 0/1:41:25:10:15:29:86.21%:99:1.3609E-12:36:4:1:3:29 1/1:43:18:9:9:19:94.74%:92:5.6585E-10:37:1:0:1:19 0/1:40:24:11:13:27:88.89%:99:2.0853E-12:36:3:0:3:27 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:15:10:5:16:93.75%:75:2.8282E-8:39:1:0:1:16 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:18:10:8:20:90%:87:1.6758E-9:38:2:0:2:20 1/1:41:29:14:15:31:93.55%:99:1.1344E-15:39:2:0:2:31 0/1:48:8:4:4:12:66.67%:31:6.7304E-4:36:4:1:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:43:18:3:15:20:90%:87:1.6758E-9:37:2:1:1:20 1/1:52:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:41:7:3:4:10:70%:28:1.548E-3:36:3:1:2:11 1/1:47:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:41:19:11:8:23:82.61%:86:2.1316E-9:38:4:0:4:24 1/1:42:16:10:6:17:94.12%:81:7.7134E-9:39:1:0:1:17 0/1:46:14:8:6:19:73.68%:59:1.2025E-6:37:5:1:4:19 1/1:45:12:7:5:13:92.31%:58:1.3461E-6:38:1:0:1:13 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 0/1:48:14:6:8:16:87.5%:65:2.5454E-7:57:2:1:1:17 0/1:42:21:8:13:24:87.5%:99:9.0704E-11:36:3:1:2:24 0/1:39:23:12:11:29:79.31%:99:5.3984E-11:36:6:2:4:29 1/1:41:22:7:15:24:91.67%:99:1.0078E-11:38:2:0:2:24 0/1:41:9:5:4:13:69.23%:36:2.2883E-4:38:4:0:4:13 1/1:38:12:3:9:13:92.31%:58:1.3461E-6:26:1:0:1:13 0/1:39:15:8:7:17:88.24%:71:7.3277E-8:39:2:0:2:19 0/1:38:17:7:10:21:80.95%:76:2.3502E-8:37:4:1:3:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:41:7:6:1:9:77.78%:29:1.1312E-3:38:2:0:2:9 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 0/1:41:38:20:18:46:82.61%:99:2.5328E-18:36:8:0:8:47 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:21:8:13:23:91.3%:99:3.6437E-11:38:2:0:2:24 1/1:41:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:13:16:32:90.62%:99:3.5714E-15:38:3:0:3:32 1/1:42:25:10:15:27:92.59%:99:2.0853E-13:39:2:0:2:27 0/1:42:16:7:9:22:76.19%:69:1.2221E-7:37:5:2:3:22 0/1:40:22:10:12:25:88%:99:2.5916E-11:49:3:1:2:27 0/1:43:25:13:12:28:89.29%:99:5.8768E-13:38:3:0:3:28 1/1:37:11:5:6:12:91.67%:53:4.8074E-6:37:1:0:1:12 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:22:10:12:23:95.65%:99:2.9149E-12:76:1:1:0:24 0/1:36:12:4:8:16:75%:50:8.0605E-6:37:4:1:3:16 1/1:43:22:9:13:24:91.67%:99:1.0078E-11:38:2:0:2:24 1/1:39:22:9:13:23:95.65%:99:2.9149E-12:39:1:0:1:23 0/1:41:30:13:17:34:88.24%:99:2.5943E-15:46:4:2:2:35 0/1:40:24:9:15:29:82.76%:99:9.2544E-12:37:5:1:4:29 0/1:42:19:11:8:23:82.61%:86:2.1316E-9:35:4:0:4:23 1/1:42:17:8:9:18:94.44%:86:2.0936E-9:72:1:1:0:22 1/1:43:25:13:12:27:92.59%:99:2.0853E-13:38:2:0:2:28 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 0/1:38:33:11:22:38:86.84%:99:1.3966E-16:34:5:0:5:38 0/1:39:25:12:13:29:86.21%:99:1.3609E-12:37:4:0:4:30 1/1:43:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:17:10:7:18:94.44%:86:2.0936E-9:39:1:0:1:18 1/1:39:30:14:16:33:90.91%:99:9.89E-16:38:3:0:3:35 0/1:38:27:12:15:31:87.1%:99:1.125E-13:38:4:0:4:31 1/1:40:22:10:12:24:91.67%:99:1.0078E-11:37:2:0:2:25 0/1:43:14:8:6:16:87.5%:65:2.5454E-7:39:2:0:2:16 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 0/1:41:19:8:11:23:82.61%:86:2.1316E-9:37:4:0:4:24 1/1:39:22:14:8:24:91.67%:99:1.0078E-11:38:2:0:2:24 1/1:37:29:13:16:30:96.67%:99:2.6212E-16:39:1:0:1:31 0/1:38:25:14:11:28:89.29%:99:5.8768E-13:38:3:0:3:30 1/1:39:18:7:11:19:94.74%:92:5.6585E-10:32:1:1:0:21 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:18:10:8:20:90%:87:1.6758E-9:34:2:0:2:20 1/1:37:24:15:9:25:96%:99:2.0568E-13:24:1:0:1:25 1/1:37:20:9:11:21:95.24%:99:4.0873E-11:38:1:0:1:22 1/1:41:21:14:7:23:91.3%:99:3.6437E-11:36:2:0:2:24 0/1:40:12:9:3:14:85.71%:55:2.9913E-6:35:2:0:2:14 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:20:10:10:22:90.91%:98:1.3117E-10:39:2:0:2:22 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:19:5:14:20:95%:98:1.5234E-10:39:1:0:1:20 1/1:40:19:9:10:21:90.48%:93:4.7003E-10:38:2:0:2:21 1/1:38:20:10:10:21:95.24%:99:4.0873E-11:38:1:0:1:21 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:26:11:15:27:96.3%:99:1.4382E-14:38:1:0:1:27 1/1:40:19:10:9:21:90.48%:93:4.7003E-10:38:2:1:1:22 1/1:38:24:13:11:26:92.31%:99:7.6222E-13:37:2:0:2:27 1/1:38:12:7:5:13:92.31%:58:1.3461E-6:39:1:0:1:13 1/1:40:18:9:9:19:94.74%:92:5.6585E-10:38:1:0:1:20 0/1:38:15:7:8:17:88.24%:71:7.3277E-8:38:2:0:2:17 0/1:40:26:14:12:33:78.79%:99:2.5824E-12:47:7:3:4:38 1/1:43:18:10:8:20:94.74%:92:5.6585E-10:37:1:0:1:20 MTB_anc 1190859 . ACCGTTGCCG A . PASS AC=115;AF=0.386;AN=298;ANN=A|disruptive_inframe_deletion|MODERATE|PE_PGRS20_Rv1068c|gene1091|transcript|Transcript_gene1091|Coding|1/1|c.1281_1289delCGGCAACGG|p.Gly428_Gly430del|1289/1392|1281/1392|427/463||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1190860_1190868delCCGTTGCCG||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1190860_1190868delCCGTTGCCG||||||;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:28:24:4:28:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:38:11:6:5:11:91.67%:53:4.8074E-6:60:1:1:0:12 0/0:0:0:0:0:25:0%:48:1E0:37:25:21:4:25 1/1:37:12:6:6:12:92.31%:58:1.3461E-6:32:1:0:1:13 0/0:0:0:0:0:19:0%:37:1E0:37:19:15:4:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:15:4:19 1/1:36:16:14:2:14:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:19 1/1:36:26:21:5:26:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:36:17:12:5:17:94.44%:86:2.0936E-9:29:1:0:1:18 0/0:0:0:0:0:16:0%:29:1E0:38:16:13:3:16 1/1:33:18:12:6:19:90%:87:1.6758E-9:34:2:0:2:20 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:29:23:6:28:96.67%:99:2.6212E-16:33:1:1:0:30 0/0:0:0:0:0:19:0%:37:1E0:36:19:15:4:21 0/0:0:0:0:0:17:0%:33:1E0:38:17:15:2:18 1/1:36:12:8:4:12:92.31%:58:1.3461E-6:33:1:0:1:13 1/1:36:14:11:3:14:93.33%:69:1.0315E-7:37:1:1:0:15 0/0:0:0:0:0:7:0%:14:1E0:36:7:7:0:8 0/0:0:0:0:0:9:0%:18:1E0:43:9:8:1:10 0/0:0:0:0:0:14:0%:25:1E0:37:14:13:1:15 1/1:34:35:31:4:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:16:15:1:16:94.12%:81:7.7134E-9:37:1:1:0:17 1/1:39:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:24:20:4:24:92.31%:99:7.6222E-13:34:2:2:0:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:15:2:17 1/1:34:9:7:2:9:90%:42:5.9538E-5:34:1:0:1:10 0/0:0:0:0:0:9:0%:18:1E0:36:9:8:1:11 1/1:36:19:15:4:20:90.48%:93:4.7003E-10:33:2:2:0:21 0/0:0:0:0:0:30:0%:55:1E0:37:30:28:2:32 1/1:36:25:19:6:22:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:18:0%:32:1E0:37:18:14:4:18 0/0:0:0:0:0:12:0%:21:1E0:35:12:10:2:12 0/1:34:9:8:1:10:81.82%:39:1.1057E-4:32:2:0:2:11 0/0:0:0:0:0:15:0%:29:1E0:38:15:10:5:15 1/1:36:28:21:7:29:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:36:22:18:4:21:100%:99:4.7526E-13:0:0:0:0:23 0/1:36:24:16:8:28:82.76%:99:9.2544E-12:34:5:3:2:29 0/0:0:0:0:0:24:0%:44:1E0:37:24:17:7:24 1/1:34:24:19:5:23:96%:99:2.0568E-13:37:1:1:0:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:20:0:20 0/1:34:19:12:7:19:86.36%:89:1.0931E-9:51:3:1:2:22 1/1:34:18:14:4:17:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:33:13:8:5:11:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:21:0%:40:1E0:38:21:19:2:22 1/1:37:28:25:3:29:96.55%:99:9.9776E-16:32:1:1:0:29 0/0:0:0:0:0:19:0%:37:1E0:39:19:15:4:19 1/1:35:28:24:4:26:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:24:19:5:25:92.31%:99:7.6222E-13:35:2:1:1:26 1/1:37:14:12:2:15:93.33%:69:1.0315E-7:32:1:0:1:15 0/1:40:7:3:4:8:77.78%:29:1.1312E-3:60:2:0:2:9 0/0:0:0:0:0:20:0%:36:1E0:37:20:19:1:21 0/1:36:12:8:4:14:85.71%:55:2.9913E-6:37:2:2:0:14 1/1:39:9:5:4:10:90%:42:5.9538E-5:32:1:0:1:10 1/1:35:21:17:4:18:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:25:15:10:24:92.59%:99:2.0853E-13:37:2:2:0:27 1/1:35:15:12:3:14:93.75%:75:2.8282E-8:29:1:0:1:16 0/0:0:0:0:0:11:0%:22:1E0:37:11:11:0:11 1/1:32:20:14:6:17:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:36:19:16:3:19:95%:98:1.5234E-10:33:1:0:1:20 0/0:0:0:0:0:17:0%:33:1E0:38:17:14:3:17 1/1:33:24:15:9:22:96%:99:2.0568E-13:37:1:1:0:25 1/1:33:21:18:3:20:91.3%:99:3.6437E-11:35:2:2:0:23 0/0:0:0:0:0:9:0%:18:1E0:36:9:7:2:10 0/0:0:0:0:0:23:0%:44:1E0:37:23:19:4:23 0/0:0:0:0:0:25:0%:48:1E0:36:25:19:6:25 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:8 0/0:0:0:0:0:22:0%:40:1E0:38:22:19:3:23 1/1:35:17:14:3:16:94.44%:86:2.0936E-9:35:1:1:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:18:15:3:19:90%:87:1.6758E-9:34:2:1:1:20 0/0:0:0:0:0:22:0%:40:1E0:38:22:17:5:22 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:16:0%:29:1E0:39:16:13:3:16 0/0:0:0:0:0:20:0%:36:1E0:36:20:16:4:20 1/1:35:12:9:3:10:100%:64:3.698E-7:0:0:0:0:12 1/1:36:22:21:1:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:14:0%:25:1E0:37:14:10:4:14 1/1:39:16:14:2:17:94.12%:81:7.7134E-9:32:1:0:1:17 1/1:35:15:11:4:14:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:16:0%:29:1E0:37:16:15:1:17 1/1:34:25:19:6:23:96.15%:99:5.4444E-14:32:1:0:1:26 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:7 0/0:0:0:0:0:11:0%:22:1E0:37:11:10:1:11 0/0:0:0:0:0:18:0%:32:1E0:35:18:13:5:18 0/0:0:0:0:0:15:0%:29:1E0:36:15:11:4:15 1/1:36:9:4:5:8:90%:42:5.9538E-5:34:1:1:0:10 0/0:0:0:0:0:18:0%:32:1E0:39:18:16:2:18 1/1:34:16:10:6:15:94.12%:81:7.7134E-9:37:1:1:0:17 0/0:0:0:0:0:13:0%:25:1E0:37:13:11:2:14 1/1:35:14:13:1:14:93.33%:69:1.0315E-7:37:1:1:0:15 1/1:36:25:20:5:24:100%:99:7.9107E-15:0:0:0:0:25 0/1:38:16:13:3:17:88.89%:76:2.0936E-8:35:2:1:1:18 1/1:33:27:19:8:24:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:35:9:7:2:9:90%:42:5.9538E-5:37:1:1:0:10 0/0:0:0:0:0:11:0%:22:1E0:37:11:11:0:12 0/0:0:0:0:0:9:0%:18:1E0:38:9:7:2:10 0/0:0:0:0:0:20:0%:36:1E0:36:20:20:0:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:14:5:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:15:1:17 0/0:0:0:0:0:27:0%:52:1E0:36:27:24:3:28 0/0:0:0:0:0:15:0%:29:1E0:36:15:11:4:17 0/0:0:0:0:0:20:0%:36:1E0:36:20:18:2:22 0/0:0:0:0:0:10:0%:17:1E0:35:10:8:2:11 0/0:0:0:0:0:15:0%:29:1E0:36:15:13:2:15 0/0:0:0:0:0:26:0%:47:1E0:36:26:19:7:26 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:21 0/0:0:0:0:0:30:0%:55:1E0:37:30:24:6:31 0/0:0:0:0:0:32:0%:59:1E0:37:32:23:9:32 0/0:0:0:0:0:26:0%:47:1E0:37:26:20:6:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:19:4:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:17:4:22 0/0:0:0:0:0:29:0%:55:1E0:37:29:28:1:30 0/0:0:0:0:0:26:0%:47:1E0:36:26:22:4:28 0/0:0:0:0:0:22:0%:40:1E0:37:22:17:5:22 0/0:0:0:0:0:32:0%:59:1E0:37:32:28:4:34 0/0:0:0:0:0:26:0%:47:1E0:35:26:21:5:26 0/0:0:0:0:0:15:0%:29:1E0:36:15:14:1:16 0/0:0:0:0:0:26:0%:47:1E0:36:26:19:7:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:18:5:23 0/0:0:0:0:0:28:0%:51:1E0:36:28:22:6:29 0/0:0:0:0:0:18:0%:32:1E0:37:18:16:2:19 0/0:0:0:0:0:26:0%:47:1E0:36:26:21:5:29 0/0:0:0:0:0:15:0%:29:1E0:37:15:13:2:17 0/0:0:0:0:0:18:0%:32:1E0:34:18:15:3:19 0/0:0:0:0:0:19:0%:37:1E0:36:19:17:2:20 0/0:0:0:0:0:26:0%:47:1E0:36:26:23:3:27 0/0:0:0:0:0:15:0%:29:1E0:36:15:13:2:15 0/0:0:0:0:0:11:0%:22:1E0:37:11:11:0:14 0/0:0:0:0:0:20:0%:36:1E0:36:20:15:5:22 0/0:0:0:0:0:16:0%:29:1E0:37:16:16:0:19 0/0:0:0:0:0:13:0%:25:1E0:36:13:11:2:14 0/0:0:0:0:0:18:0%:32:1E0:36:18:14:4:18 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:7 0/0:0:0:0:0:18:0%:32:1E0:36:18:13:5:18 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:16:13:3:16:94.12%:81:7.7134E-9:34:1:0:1:17 0/1:36:12:9:3:12:85.71%:55:2.9913E-6:34:2:1:1:14 0/0:0:0:0:0:16:0%:29:1E0:37:16:13:3:17 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:15 0/0:0:0:0:0:11:0%:22:1E0:37:11:6:5:11 0/0:0:0:0:0:24:0%:44:1E0:37:24:21:3:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:17:5:24 0/0:0:0:0:0:20:0%:36:1E0:37:20:19:1:20 0/0:0:0:0:0:11:0%:22:1E0:37:11:9:2:11 0/0:0:0:0:0:20:0%:36:1E0:37:20:18:2:20 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:22 1/1:34:22:17:5:21:91.67%:99:1.0078E-11:33:2:1:1:24 1/1:32:13:10:3:11:100%:70:9.6148E-8:0:0:0:0:13 MTB_anc 1191135 . C G . PASS AC=272;AF=1.00;AN=272;ANN=G|synonymous_variant|LOW|PE_PGRS20_Rv1068c|gene1091|transcript|Transcript_gene1091|Coding|1/1|c.1014G>C|p.Ala338Ala|1014/1392|1014/1392|338/463||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1191135C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1191135C>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:10 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:34:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:42:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:34:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:10:2:8:11:90.91%:47:1.7011E-5:24:1:1:0:12 MTB_anc 1191359 . T TGCCGCCGCC,TGCCGCC . PASS AC=22,69;AF=0.145,0.454;AN=152;set=variant GT:ABQ:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:6:3:11:81.82%:39:1.1057E-4:33:2:1:1:11 ./. 0/2:38:2:6:8:88.89%:36:2.0568E-4:36:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:2 0/2:35:7:4:13:73.33%:47:1.6951E-5:36:3:1:2:15 0/2:32:4:3:7:77.78%:29:1.1312E-3:30:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:8:8:18:88.89%:81:7.7134E-9:31:1:1:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:33:3:4:12:58.33%:26:2.2883E-3:41:5:3:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:5:7:16:66.67%:50:8.0605E-6:35:4:1:3:18 0/2:35:3:3:7:75%:24:3.4965E-3:47:2:1:1:10 0/2:37:1:7:8:88.89%:36:2.0568E-4:33:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:10:5:20:71.43%:62:5.4994E-7:37:6:4:2:21 0/2:40:2:8:12:76.92%:42:5.3843E-5:36:3:1:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:2 0/2:38:3:3:7:75%:24:3.4965E-3:34:2:1:1:8 0/1:37:4:5:14:60%:36:2.2883E-4:37:4:3:1:15 0/2:32:5:3:10:80%:34:3.5723E-4:36:2:2:0:10 0/1:36:4:6:14:71.43%:41:7.6278E-5:42:4:3:1:14 0/2:37:5:7:16:75%:50:8.0605E-6:44:4:2:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:6:5:14:78.57%:53:4.8074E-6:37:1:1:0:14 0/1:34:4:2:11:54.55%:22:6.192E-3:33:5:3:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/2:30:4:3:10:58.33%:26:2.2883E-3:34:5:3:2:12 1/1:35:7:7:13:93.33%:69:1.0315E-7:38:1:0:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:3:5:8:80%:36:2.0568E-4:34:1:0:1:10 0/2:39:5:6:13:78.57%:49:1.0096E-5:33:2:2:0:14 0/1:35:3:5:18:44.44%:28:1.4461E-3:35:10:6:4:18 2/2:35:6:4:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:5:3:8:100%:41:7.77E-5:0:0:0:0:8 0/1:40:6:1:15:46.67%:25:3.1609E-3:37:8:5:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:2 0/2:37:8:2:15:66.67%:41:7.6278E-5:31:4:4:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:3:4:8:87.5%:31:6.993E-4:34:1:1:0:8 0/2:36:4:2:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/2:38:2:6:12:66.67%:31:6.7304E-4:35:4:4:0:12 1/1:35:7:2:9:90%:42:5.9538E-5:38:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:6 2/2:35:5:5:9:90.91%:47:1.7011E-5:33:1:0:1:11 0/2:39:5:4:12:75%:42:5.9538E-5:27:1:1:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/2:35:5:2:10:70%:28:1.548E-3:36:3:1:2:10 0/2:35:4:3:10:63.64%:27:1.935E-3:35:4:3:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:32:3:4:9:70%:28:1.548E-3:40:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/2:38:8:2:12:83.33%:44:3.3652E-5:29:2:2:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:9 0/2:36:5:4:12:75%:39:1.1057E-4:35:2:2:0:12 2/2:30:9:6:13:100%:81:6.4467E-9:0:0:0:0:15 2/2:33:4:5:9:90%:42:5.9538E-5:60:1:1:0:11 0/2:37:4:3:9:70%:29:1.1312E-3:33:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:2:10:90%:42:5.9538E-5:38:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:3 0/2:34:3:4:9:70%:28:1.548E-3:33:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:6 2/2:35:9:4:14:92.86%:70:9.6148E-8:0:0:0:0:14 0/2:38:2:5:8:87.5%:31:6.993E-4:38:1:0:1:8 0/2:35:4:7:12:84.62%:49:1.0096E-5:30:2:2:0:13 0/2:36:10:2:16:75%:50:8.0605E-6:34:4:4:0:16 0/2:32:1:8:10:81.82%:39:1.1057E-4:38:2:0:2:12 2/2:34:7:5:13:92.31%:58:1.3461E-6:38:1:0:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:3 0/2:40:12:3:20:75%:64:3.8543E-7:34:5:4:1:21 0/2:35:3:10:14:81.25%:57:1.6121E-6:37:3:2:1:16 0/2:37:9:4:17:72.22%:54:3.7078E-6:37:5:3:2:18 0/2:34:11:9:23:80%:89:1.1273E-9:35:5:3:2:25 2/2:39:12:10:22:95.65%:99:2.9149E-12:37:1:1:0:23 0/2:36:7:12:21:86.36%:89:1.0931E-9:35:3:2:1:22 0/2:31:4:6:12:76.92%:47:1.7011E-5:37:1:1:0:13 0/2:37:8:8:19:84.21%:73:4.357E-8:35:3:3:0:19 2/2:41:4:4:8:100%:41:7.77E-5:0:0:0:0:8 0/2:30:6:6:13:85.71%:55:2.9913E-6:49:2:1:1:14 0/2:36:9:5:16:87.5%:65:2.5454E-7:35:2:1:1:16 0/2:32:7:1:10:72.73%:32:5.16E-4:34:3:2:1:11 0/2:30:4:11:14:88.24%:71:7.3277E-8:36:2:0:2:17 0/2:35:6:5:15:73.33%:47:1.6951E-5:37:3:1:2:15 0/2:38:7:10:21:80.95%:76:2.3502E-8:32:4:3:1:21 0/2:33:9:7:19:80%:71:7.7086E-8:33:4:3:1:20 2/2:37:6:4:9:100%:52:5.4125E-6:0:0:0:0:10 0/2:35:4:2:7:85.71%:26:2.331E-3:32:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:3 0/2:35:4:6:11:83.33%:44:3.3652E-5:34:2:0:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:3 2/2:34:5:4:9:90%:42:5.9538E-5:34:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:6 0/2:40:1:5:9:66.67%:23:4.5249E-3:42:3:1:2:9 0/2:32:2:4:7:75%:24:3.4965E-3:37:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:6 0/2:35:7:6:15:86.67%:60:8.7675E-7:35:2:1:1:16 0/2:39:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:3 0/2:35:8:1:12:75%:37:1.6826E-4:42:3:3:0:12 2/2:38:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 0/2:35:5:1:8:75%:24:3.4965E-3:36:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./. MTB_anc 1191450 . G C . PASS AC=20;AF=0.200;AN=100;ANN=C|synonymous_variant|LOW|PE_PGRS20_Rv1068c|gene1091|transcript|Transcript_gene1091|Coding|1/1|c.699C>G|p.Ala233Ala|699/1392|699/1392|233/463||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1191450G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1191450G>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:39:5:2:3:12:41.67%:3:1.8634E-2:35:7:7:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:3:1:2:9:33.33%:4:1.0294E-1:36:6:6:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:6:3:3:10:60%:22:5.418E-3:35:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:42:4:2:2:10:40%:3:4.3344E-2:38:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 0/0:38:1:0:1:9:11.11%:11:5E-1:35:8:8:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:40:5:2:3:13:38.46%:4:1.9565E-2:36:8:8:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:2:0:2:8:25%:5:2.3333E-1:38:6:6:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:12:7:5:21:57.14%:45:2.658E-5:36:9:9:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:2:2:10:40%:3:4.3344E-2:37:6:5:1:10 0/1:35:6:1:5:12:50%:21:6.865E-3:36:6:5:1:12 0/1:34:6:2:4:16:37.5%:20:8.837E-3:37:10:10:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 0/1:39:7:2:5:12:58.33%:26:2.2883E-3:37:5:5:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:35:8:7:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:43:7:1:6:12:58.33%:26:2.2883E-3:35:5:5:0:12 0/1:37:7:1:6:14:50%:25:2.8986E-3:36:7:6:1:14 0/0:48:2:2:0:10:20%:7:2.3684E-1:35:8:6:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:41:5:2:3:14:35.71%:4:2.037E-2:36:9:9:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:7:2:5:12:58.33%:26:2.2883E-3:35:5:5:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:34:2:0:2:9:22.22%:7:2.3529E-1:34:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:33:1:0:1:10:10%:11:5E-1:37:9:8:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:38:1:0:1:10:10%:11:5E-1:37:9:8:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:2:0:2:9:22.22%:7:2.3529E-1:35:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:6:4:2:13:46.15%:21:7.4534E-3:34:7:7:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:1:1:0:7:14.29%:8:5E-1:35:6:6:0:7 0/1:36:6:3:3:10:60%:22:5.418E-3:35:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:36:11:10:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:9:7:2:17:52.94%:33:4.6348E-4:35:8:8:0:17 0/0:0:0:0:0:9:0%:18:1E0:37:9:9:0:9 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 0/1:33:8:2:6:10:80%:34:3.5723E-4:35:2:2:0:10 0/0:35:5:1:4:14:35.71%:4:2.037E-2:36:9:9:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:41:6:2:4:15:40%:20:8.4291E-3:37:9:7:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:42:8:6:2:17:47.06%:28:1.3389E-3:36:9:9:0:17 0/1:38:9:7:2:16:56.25%:33:4.0786E-4:36:7:7:0:16 0/1:34:6:2:4:11:54.55%:22:6.192E-3:37:5:5:0:11 0/1:37:8:2:6:12:66.67%:31:6.7304E-4:36:4:4:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:41:6:4:2:16:37.5%:20:8.837E-3:36:10:9:1:16 0/0:34:1:0:1:8:12.5%:8:5E-1:36:7:7:0:9 0/0:35:4:1:3:13:30.77%:6:4.7826E-2:36:9:9:0:13 0/0:39:5:5:0:12:41.67%:3:1.8634E-2:36:7:7:0:12 0/0:31:5:2:3:13:38.46%:4:1.9565E-2:36:8:8:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:38:9:2:7:17:52.94%:33:4.6348E-4:37:8:8:0:17 0/1:37:6:2:4:11:54.55%:22:6.192E-3:35:5:5:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:46:2:1:1:8:25%:5:2.3333E-1:35:6:6:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:32:1:0:1:9:11.11%:11:5E-1:36:8:8:0:9 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 0/0:0:0:0:0:7:0%:14:1E0:36:7:7:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:60:1:1:0:8:12.5%:8:5E-1:37:7:7:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 1191453 . C T . PASS AC=11;AF=0.112;AN=98;ANN=T|synonymous_variant|LOW|PE_PGRS20_Rv1068c|gene1091|transcript|Transcript_gene1091|Coding|1/1|c.696G>A|p.Gly232Gly|696/1392|696/1392|232/463||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1191453C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1191453C>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:33:4:1:3:12:33.33%:4:4.6584E-2:36:8:8:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:2:0:2:9:22.22%:5:2.3333E-1:36:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:40:4:2:2:10:40%:3:4.3344E-2:38:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 0/0:38:1:0:1:9:11.11%:11:5E-1:36:8:8:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:39:4:1:3:12:33.33%:4:4.6584E-2:37:8:8:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:2:0:2:8:25%:5:2.3333E-1:37:6:6:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:10:5:5:19:52.63%:37:1.9541E-4:37:9:9:0:20 0/0:36:2:1:1:8:25%:5:2.3333E-1:36:6:6:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:4:2:2:11:36.36%:4:4.5113E-2:36:7:6:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:33:5:1:4:15:33.33%:6:2.1073E-2:37:10:10:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:39:7:2:5:12:58.33%:26:2.2883E-3:37:5:5:0:12 0/0:38:1:0:1:7:14.29%:8:5E-1:35:6:6:0:8 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:35:7:6:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:7:1:6:11:63.64%:27:1.935E-3:37:4:4:0:12 0/1:36:7:1:6:14:50%:25:2.8986E-3:36:7:6:1:14 0/0:43:2:2:0:10:20%:7:2.3684E-1:37:8:6:2:10 0/0:37:3:1:2:9:33.33%:4:1.0294E-1:36:6:6:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:2:4:17:35.29%:20:9.2021E-3:36:11:11:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:2:4:10:60%:23:4.5249E-3:36:3:3:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:2:1:1:9:22.22%:7:2.3529E-1:35:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:37:10:9:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:1:0:1:11:9.09%:14:5E-1:36:10:9:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:2:0:2:9:22.22%:7:2.3529E-1:37:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:43:3:1:2:10:30%:4:1.0526E-1:35:7:7:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:37:11:10:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:34:3:3:0:12:25%:6:1.087E-1:35:9:9:0:16 0/0:0:0:0:0:9:0%:18:1E0:37:9:9:0:9 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:0:0:0:0:8:0%:14:1E0:36:8:8:0:8 0/1:34:8:2:6:10:80%:36:2.0568E-4:38:1:1:0:10 0/0:32:5:1:4:14:35.71%:4:2.037E-2:37:9:9:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:5:2:3:14:35.71%:4:2.037E-2:37:9:7:2:14 0/0:0:0:0:0:7:0%:14:1E0:37:7:7:0:7 0/1:42:7:5:2:16:43.75%:24:3.3988E-3:36:9:9:0:17 0/1:32:9:7:2:16:56.25%:33:4.0786E-4:37:7:7:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 0/1:37:6:0:6:10:60%:22:5.418E-3:38:4:4:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:41:4:2:2:14:28.57%:6:4.8889E-2:36:10:9:1:16 0/0:34:1:1:0:8:12.5%:8:5E-1:36:7:7:0:8 0/0:36:2:0:2:11:18.18%:10:2.381E-1:36:9:9:0:12 0/0:46:2:2:0:9:22.22%:7:2.3529E-1:37:7:7:0:11 0/0:33:3:1:2:11:27.27%:7:1.0714E-1:36:8:8:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:32:8:2:6:18:44.44%:28:1.4461E-3:36:10:9:1:18 0/0:37:5:1:4:11:45.45%:3:1.7544E-2:36:6:6:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:33:2:1:1:8:25%:5:2.3333E-1:35:6:6:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:8:0%:14:1E0:36:8:8:0:8 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:8 0/0:0:0:0:0:7:0%:14:1E0:37:7:7:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:60:1:1:0:8:12.5%:8:5E-1:38:7:7:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 1191497 . T A . PASS AC=123;AF=0.504;AN=244;ANN=A|missense_variant|MODERATE|PE_PGRS20_Rv1068c|gene1091|transcript|Transcript_gene1091|Coding|1/1|c.652A>T|p.Thr218Ser|652/1392|652/1392|218/463||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1191497T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1191497T>A||||||;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:16:15:1:18:88.89%:76:2.0936E-8:35:2:2:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:12:10:2:17:70.59%:49:1.1285E-5:38:5:4:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:10:6:4:17:58.82%:38:1.4831E-4:35:7:7:0:18 0/1:35:7:3:4:9:77.78%:29:1.1312E-3:34:2:2:0:9 0/1:36:10:6:4:14:71.43%:41:7.6278E-5:33:4:4:0:14 0/1:37:8:6:2:10:80%:34:3.5723E-4:38:2:1:1:10 0/1:36:8:7:1:16:50%:29:1.2236E-3:36:8:7:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:40:6:4:2:10:60%:22:5.418E-3:36:4:4:0:10 0/1:36:16:11:5:21:76.19%:69:1.2221E-7:33:5:4:1:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:15:12:3:22:68.18%:61:7.4178E-7:36:7:7:0:22 0/1:39:9:3:6:11:81.82%:39:1.1057E-4:36:2:2:0:12 0/1:36:7:6:1:9:77.78%:29:1.1312E-3:36:2:1:1:10 0/1:37:6:6:0:8:75%:24:3.4965E-3:35:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:14:10:4:16:87.5%:65:2.5454E-7:36:2:2:0:16 0/0:34:5:4:1:11:45.45%:3:1.7544E-2:35:6:6:0:11 0/1:35:20:18:2:26:76.92%:87:1.8273E-9:36:6:5:1:27 0/1:35:6:6:0:7:85.71%:26:2.331E-3:34:1:1:0:7 0/1:37:9:7:2:12:75%:37:1.6826E-4:36:3:3:0:12 0/1:36:17:13:4:26:65.38%:68:1.4238E-7:35:9:8:1:27 0/1:39:11:8:3:13:84.62%:49:1.0096E-5:36:2:2:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:9:6:3:14:64.29%:35:2.8986E-4:36:5:3:2:14 0/1:37:7:5:2:14:50%:25:2.8986E-3:35:7:4:3:14 0/1:37:12:9:3:16:75%:50:8.0605E-6:34:4:3:1:16 0/1:35:15:12:3:21:71.43%:62:5.4994E-7:35:6:5:1:21 0/1:36:17:11:6:21:80.95%:76:2.3502E-8:34:4:4:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:12:8:4:18:66.67%:48:1.4831E-5:37:6:5:1:18 0/1:34:11:8:3:15:73.33%:46:2.4988E-5:38:4:2:2:16 0/1:36:15:14:1:19:78.95%:66:2.5053E-7:36:4:2:2:19 0/1:36:10:8:2:12:83.33%:44:3.3652E-5:33:2:2:0:14 0/1:35:11:9:2:17:64.71%:43:4.3258E-5:36:6:5:1:18 0/1:35:9:8:1:13:69.23%:36:2.2883E-4:35:4:2:2:13 0/1:35:13:9:4:16:81.25%:57:1.6121E-6:36:3:3:0:16 0/1:36:9:6:3:13:69.23%:36:2.2883E-4:37:4:4:0:15 0/1:35:9:8:1:15:60%:34:3.4983E-4:34:6:6:0:15 0/1:36:6:6:0:13:46.15%:21:7.4534E-3:36:7:7:0:15 0/1:36:11:8:3:15:73.33%:46:2.4988E-5:37:4:4:0:15 0/1:38:12:8:4:20:60%:46:2.2548E-5:36:8:7:1:20 0/1:37:13:11:2:15:86.67%:60:8.7675E-7:38:2:2:0:15 0/1:35:11:8:3:15:73.33%:46:2.4988E-5:36:4:2:2:15 0/1:37:7:5:2:10:70%:28:1.548E-3:34:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:18:16:2:23:78.26%:79:1.1937E-8:40:5:4:1:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:7:6:1:9:77.78%:29:1.1312E-3:36:2:2:0:9 0/1:36:12:10:2:15:80%:52:5.2605E-6:35:3:3:0:16 0/1:36:11:9:2:17:64.71%:43:4.3258E-5:36:6:5:1:17 0/1:33:9:7:2:12:75%:37:1.6826E-4:38:3:3:0:12 0/1:35:8:4:4:10:80%:34:3.5723E-4:37:2:2:0:10 0/1:36:12:10:2:18:66.67%:48:1.4831E-5:37:6:6:0:18 0/1:35:9:6:3:13:69.23%:36:2.2883E-4:37:4:4:0:13 0/1:36:6:5:1:9:66.67%:23:4.5249E-3:38:3:3:0:9 0/1:36:8:5:3:10:80%:34:3.5723E-4:37:2:2:0:10 0/1:35:11:9:2:14:78.57%:47:1.6951E-5:37:3:2:1:14 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:35:7:6:1:11 0/1:36:7:7:0:12:58.33%:26:2.2883E-3:38:5:4:1:12 1/1:35:20:19:1:22:90.91%:98:1.3117E-10:38:2:2:0:22 0/1:36:6:4:2:11:54.55%:22:6.192E-3:35:5:4:1:13 0/1:35:15:12:3:21:71.43%:62:5.4994E-7:37:6:4:2:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:10:9:1:16:62.5%:39:1.2413E-4:36:6:4:2:17 0/1:37:8:8:0:11:72.73%:32:5.16E-4:36:3:3:0:11 0/1:35:6:3:3:7:85.71%:26:2.331E-3:38:1:1:0:7 0/1:37:9:5:4:13:69.23%:36:2.2883E-4:35:4:3:1:13 0/1:37:10:6:4:15:66.67%:40:9.995E-5:36:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:16:10:6:19:84.21%:73:4.357E-8:36:3:3:0:19 0/1:36:14:11:3:21:66.67%:56:2.1998E-6:35:7:6:1:21 0/1:39:8:5:3:13:61.54%:30:8.238E-4:36:5:3:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:7:7:0:8:87.5%:31:6.993E-4:33:1:0:1:8 0/1:35:17:16:1:23:73.91%:72:5.7694E-8:37:6:5:1:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:10:9:1:11:90.91%:47:1.7011E-5:38:1:1:0:11 0/1:36:7:6:1:9:77.78%:29:1.1312E-3:37:2:2:0:10 0/1:35:6:6:0:10:60%:22:5.418E-3:36:4:3:1:11 0/1:37:10:6:4:15:66.67%:40:9.995E-5:34:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:6:6:0:10:60%:22:5.418E-3:33:4:2:2:10 0/1:37:17:14:3:21:80.95%:76:2.3502E-8:36:4:3:1:21 0/1:36:8:6:2:12:66.67%:31:6.7304E-4:37:4:3:1:12 0/1:37:22:14:8:26:84.62%:99:5.5261E-11:36:4:4:0:26 0/1:36:12:12:0:15:80%:52:5.2605E-6:34:3:2:1:15 0/1:37:12:12:0:18:66.67%:48:1.4831E-5:35:6:5:1:18 0/1:36:6:6:0:9:66.67%:23:4.5249E-3:36:3:3:0:9 0/1:36:18:15:3:21:85.71%:84:3.7603E-9:36:3:3:0:22 0/1:36:7:7:0:13:53.85%:25:2.6087E-3:35:6:5:1:13 0/1:38:15:10:5:18:83.33%:68:1.4655E-7:37:3:3:0:20 0/1:35:12:12:0:14:85.71%:55:2.9913E-6:37:2:2:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:15:13:2:20:75%:64:3.8543E-7:33:5:4:1:21 0/1:34:9:7:2:16:56.25%:33:4.0786E-4:36:7:6:1:18 0/1:34:7:5:2:12:58.33%:26:2.2883E-3:33:5:5:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:7:5:2:12:58.33%:26:2.2883E-3:35:5:4:1:12 0/1:36:14:10:4:21:66.67%:56:2.1998E-6:36:7:4:3:22 0/1:36:14:13:1:16:87.5%:65:2.5454E-7:37:2:2:0:18 0/1:36:14:11:3:17:82.35%:63:4.8851E-7:38:3:3:0:17 0/1:37:13:11:2:22:59.09%:50:9.5813E-6:37:9:9:0:23 0/1:38:10:9:1:13:76.92%:42:5.3843E-5:35:3:2:1:14 0/1:36:13:10:3:18:72.22%:54:3.7078E-6:37:5:5:0:18 0/1:36:13:12:1:16:81.25%:57:1.6121E-6:30:3:2:1:18 0/1:36:17:13:4:21:80.95%:76:2.3502E-8:36:4:2:2:21 0/1:34:7:6:1:14:50%:25:2.8986E-3:35:7:7:0:16 1/1:36:19:17:2:20:95%:98:1.5234E-10:33:1:1:0:20 0/1:35:18:16:2:26:69.23%:74:3.6611E-8:36:8:8:0:26 0/1:36:15:15:0:19:78.95%:66:2.5053E-7:35:4:4:0:20 0/1:35:8:6:2:11:72.73%:32:5.16E-4:36:3:3:0:12 0/1:34:9:6:3:12:75%:37:1.6826E-4:35:3:3:0:12 0/1:35:21:14:7:27:77.78%:92:5.6888E-10:37:6:5:1:27 0/1:36:19:15:4:25:76%:82:5.8245E-9:37:6:5:1:27 0/1:37:6:5:1:10:60%:22:5.418E-3:36:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:6:6:0:8:75%:24:3.4965E-3:35:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:33:10:8:2:12:83.33%:44:3.3652E-5:32:2:2:0:12 0/1:35:6:4:2:8:75%:24:3.4965E-3:38:2:2:0:8 0/1:35:7:6:1:10:70%:28:1.548E-3:33:3:3:0:10 0/1:37:8:7:1:11:72.73%:32:5.16E-4:34:3:3:0:11 0/1:36:6:6:0:7:85.71%:26:2.331E-3:36:1:1:0:8 0/1:34:6:5:1:8:75%:24:3.4965E-3:36:2:2:0:8 0/1:35:7:6:1:10:70%:28:1.548E-3:35:3:3:0:11 0/1:35:13:12:1:17:76.47%:55:2.5647E-6:34:4:4:0:17 0/1:35:11:11:0:17:64.71%:43:4.3258E-5:37:6:5:1:17 0/1:37:11:10:1:14:78.57%:47:1.6951E-5:38:3:3:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:6:5:1:8:75%:24:3.4965E-3:36:2:2:0:8 0/1:37:7:6:1:9:77.78%:29:1.1312E-3:29:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:6:3:3:10:60%:22:5.418E-3:34:4:4:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:15:7:8:21:71.43%:62:5.4994E-7:35:6:5:1:21 0/1:36:6:3:3:8:75%:24:3.4965E-3:37:2:1:1:8 0/1:36:6:4:2:12:50%:21:6.865E-3:37:6:6:0:12 0/1:36:11:11:0:15:73.33%:46:2.4988E-5:36:4:1:3:15 0/1:35:9:9:0:13:69.23%:36:2.2883E-4:35:4:4:0:13 0/1:35:7:6:1:11:63.64%:27:1.935E-3:37:4:4:0:11 MTB_anc 1191512 . C T . PASS AC=134;AF=0.493;AN=272;ANN=T|missense_variant|MODERATE|PE_PGRS20_Rv1068c|gene1091|transcript|Transcript_gene1091|Coding|1/1|c.637G>A|p.Gly213Ser|637/1392|637/1392|213/463||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1191512C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1191512C>T||||||;HOM=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:18:14:4:21:85.71%:84:3.7603E-9:35:3:2:1:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:39:11:9:2:22:50%:40:9.1981E-5:36:11:6:5:23 0/1:35:7:7:0:9:77.78%:29:1.1312E-3:35:2:1:1:9 0/1:36:11:7:4:16:68.75%:44:3.3854E-5:37:5:4:1:18 0/1:37:8:4:4:11:72.73%:32:5.16E-4:34:3:2:1:11 0/1:39:9:5:4:19:47.37%:32:5.667E-4:36:10:5:5:20 0/1:37:10:8:2:13:76.92%:42:5.3843E-5:35:3:1:2:14 0/1:36:9:8:1:17:52.94%:33:4.6348E-4:37:8:7:1:17 0/1:40:6:3:3:12:50%:21:6.865E-3:38:6:3:3:12 0/1:41:6:5:1:11:54.55%:22:6.192E-3:38:5:3:2:12 0/1:35:17:12:5:24:70.83%:70:8.1543E-8:37:7:4:3:26 0/1:35:7:6:1:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:36:18:15:3:28:64.29%:72:6.1806E-8:37:10:7:3:28 0/1:40:8:2:6:11:72.73%:32:5.16E-4:38:3:3:0:12 0/1:37:8:7:1:14:57.14%:30:9.6618E-4:36:6:1:5:14 0/1:38:6:6:0:8:75%:24:3.4965E-3:38:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:6:5:1:12:50%:21:6.865E-3:35:6:3:3:12 0/1:37:15:11:4:18:83.33%:68:1.4655E-7:38:3:3:0:18 0/1:36:6:5:1:12:50%:21:6.865E-3:37:6:6:0:12 0/1:36:22:19:3:31:70.97%:92:5.875E-10:37:9:6:3:32 0/1:37:8:8:0:9:88.89%:36:2.0568E-4:38:1:1:0:10 0/1:36:10:8:2:16:62.5%:39:1.2413E-4:35:6:3:3:16 0/1:37:22:15:7:34:64.71%:88:1.3675E-9:36:12:9:3:34 0/1:39:12:9:3:20:60%:46:2.2548E-5:32:8:3:5:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:10:8:2:18:55.56%:37:1.7215E-4:35:8:3:5:19 0/1:36:8:6:2:17:47.06%:28:1.3389E-3:36:9:4:5:18 0/1:36:14:11:3:21:66.67%:56:2.1998E-6:37:7:5:2:21 0/1:36:16:13:3:28:57.14%:61:7.3043E-7:36:12:9:3:28 0/1:36:16:11:5:23:69.57%:66:2.4726E-7:39:7:7:0:25 0/1:37:6:5:1:8:75%:24:3.4965E-3:36:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:35:6:4:2:14:42.86%:20:7.971E-3:35:8:5:3:14 0/1:38:14:9:5:24:58.33%:53:4.0663E-6:37:10:8:2:24 0/1:35:10:9:1:16:62.5%:39:1.2413E-4:36:6:3:3:18 0/1:37:14:12:2:19:73.68%:59:1.2025E-6:36:5:3:2:21 0/1:36:15:10:5:17:88.24%:71:7.3277E-8:38:2:2:0:17 0/1:35:13:11:2:21:61.9%:50:7.9741E-6:37:8:6:2:22 0/1:35:12:10:2:19:63.16%:47:1.8611E-5:35:7:4:3:19 0/1:38:12:8:4:16:75%:50:8.0605E-6:38:4:3:1:17 0/1:36:11:7:4:18:61.11%:42:5.2969E-5:35:7:5:2:19 0/1:35:11:10:1:22:50%:40:9.1981E-5:36:11:8:3:22 0/1:35:11:10:1:20:55%:41:7.2653E-5:39:9:8:1:20 0/1:37:11:8:3:17:64.71%:43:4.3258E-5:35:6:5:1:17 0/1:40:12:8:4:22:54.55%:45:3.066E-5:39:10:8:2:22 0/1:37:15:11:4:20:75%:64:3.8543E-7:35:5:4:1:21 0/1:35:12:7:5:20:60%:46:2.2548E-5:36:8:6:2:22 0/1:37:7:5:2:12:58.33%:26:2.2883E-3:36:5:3:2:12 0/1:37:6:4:2:9:66.67%:23:4.5249E-3:34:3:0:3:9 0/1:36:21:18:3:29:72.41%:88:1.2841E-9:39:8:5:3:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:9:8:1:11:81.82%:39:1.1057E-4:38:2:2:0:11 0/1:37:12:9:3:19:63.16%:47:1.8611E-5:35:7:7:0:19 0/1:36:11:9:2:19:57.89%:42:6.2811E-5:37:8:7:1:19 0/1:33:9:7:2:14:64.29%:35:2.8986E-4:35:5:4:1:14 0/1:36:11:6:5:13:84.62%:49:1.0096E-5:38:2:2:0:13 0/1:36:13:11:2:23:56.52%:49:1.1242E-5:35:10:7:3:24 0/1:36:9:6:3:15:60%:34:3.4983E-4:36:6:4:2:15 0/1:37:8:6:2:13:61.54%:30:8.238E-4:36:5:3:2:13 0/1:36:9:5:4:13:69.23%:36:2.2883E-4:35:4:2:2:14 0/1:37:9:7:2:12:75%:37:1.6826E-4:38:3:2:1:14 0/1:40:7:6:1:16:43.75%:24:3.3988E-3:37:9:8:1:16 0/1:36:9:8:1:15:60%:34:3.4983E-4:35:6:4:2:15 0/1:36:22:21:1:25:88%:99:2.5916E-11:36:3:3:0:25 0/1:37:6:5:1:14:42.86%:20:7.971E-3:35:8:4:4:17 0/1:35:16:13:3:22:72.73%:67:1.7905E-7:38:6:4:2:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:13:12:1:25:52%:48:1.4654E-5:37:12:6:6:25 0/1:39:10:9:1:14:71.43%:41:7.6278E-5:36:4:3:1:14 0/1:36:7:4:3:11:63.64%:27:1.935E-3:42:4:3:1:11 0/1:36:12:8:4:17:70.59%:49:1.1285E-5:37:5:4:1:17 0/1:38:11:7:4:18:61.11%:42:5.2969E-5:40:7:5:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:37:18:11:7:26:69.23%:74:3.6611E-8:36:8:6:2:26 0/1:37:17:14:3:31:54.84%:64:3.5853E-7:35:14:10:4:31 0/1:38:11:7:4:17:64.71%:43:4.3258E-5:37:6:4:2:17 0/0:36:3:3:0:10:30%:4:1.0526E-1:37:7:5:2:10 0/1:36:8:8:0:10:80%:34:3.5723E-4:35:2:0:2:10 0/1:36:18:17:1:27:66.67%:73:4.8354E-8:35:9:6:3:27 0/1:38:7:4:3:9:77.78%:29:1.1312E-3:38:2:1:1:9 0/1:39:11:10:1:14:78.57%:47:1.6951E-5:33:3:1:2:14 0/1:37:8:7:1:12:66.67%:31:6.7304E-4:37:4:2:2:12 0/1:36:8:7:1:14:57.14%:30:9.6618E-4:37:6:3:3:14 0/1:37:9:5:4:15:60%:34:3.4983E-4:37:6:5:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:10:9:1:15:66.67%:40:9.995E-5:36:5:2:3:15 0/1:37:19:14:5:26:73.08%:80:8.6144E-9:36:7:3:4:26 0/1:39:9:6:3:14:64.29%:35:2.8986E-4:35:5:3:2:14 0/1:38:22:14:8:27:81.48%:99:1.0343E-10:37:5:4:1:28 0/1:35:13:13:0:19:68.42%:53:5.0106E-6:36:6:3:3:20 0/1:36:13:13:0:21:61.9%:50:7.9741E-6:39:8:6:2:21 0/1:38:6:6:0:11:54.55%:22:6.192E-3:37:5:4:1:11 0/1:35:20:17:3:27:74.07%:85:2.7631E-9:34:7:5:2:28 0/1:36:10:9:1:16:62.5%:39:1.2413E-4:37:6:5:1:16 0/1:37:18:12:6:23:78.26%:79:1.1937E-8:33:5:4:1:24 0/1:36:15:15:0:18:83.33%:68:1.4655E-7:33:3:2:1:18 0/1:39:6:5:1:12:50%:21:6.865E-3:36:6:3:3:12 0/1:38:16:14:2:22:72.73%:67:1.7905E-7:38:6:4:2:24 0/1:36:9:6:3:17:52.94%:33:4.6348E-4:36:8:7:1:20 0/1:36:7:5:2:13:53.85%:25:2.6087E-3:37:6:5:1:15 0/0:37:4:3:1:10:40%:3:4.3344E-2:35:6:4:2:13 0/1:36:9:6:3:17:52.94%:33:4.6348E-4:36:8:5:3:17 0/1:36:14:11:3:24:58.33%:53:4.0663E-6:36:10:5:5:25 0/1:36:19:16:3:22:86.36%:89:1.0931E-9:36:3:3:0:22 0/1:36:15:12:3:20:75%:64:3.8543E-7:34:5:4:1:21 0/1:37:15:12:3:29:51.72%:55:2.6068E-6:37:14:11:3:29 0/1:36:14:10:4:19:73.68%:59:1.2025E-6:35:5:2:3:19 0/1:36:16:12:4:29:55.17%:60:8.4872E-7:34:13:8:5:29 0/1:35:12:11:1:17:70.59%:49:1.1285E-5:37:5:4:1:21 0/1:36:18:14:4:27:66.67%:73:4.8354E-8:36:9:5:4:27 0/1:35:10:9:1:20:50%:36:2.1796E-4:36:10:8:2:20 0/1:36:21:19:2:26:80.77%:94:3.4262E-10:32:5:2:3:26 0/1:36:20:16:4:31:64.52%:80:9.197E-9:36:11:8:3:32 0/1:36:18:17:1:23:78.26%:79:1.1937E-8:37:5:5:0:23 0/1:36:9:7:2:14:64.29%:35:2.8986E-4:36:5:4:1:14 0/1:35:10:6:4:18:55.56%:37:1.7215E-4:34:8:6:2:18 0/1:36:21:14:7:28:75%:90:8.7917E-10:37:7:6:1:28 0/1:37:21:17:4:29:72.41%:88:1.2841E-9:36:8:5:3:29 0/1:35:7:6:1:13:53.85%:25:2.6087E-3:35:6:4:2:14 0/1:36:6:5:1:14:42.86%:20:7.971E-3:36:8:8:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:7:7:0:15:46.67%:25:3.1609E-3:36:8:7:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:36:6:2:4:11:54.55%:22:6.192E-3:36:5:5:0:11 0/1:35:11:8:3:14:78.57%:47:1.6951E-5:35:3:2:1:15 0/1:36:6:4:2:9:66.67%:23:4.5249E-3:36:3:3:0:9 0/1:34:8:7:1:11:72.73%:32:5.16E-4:36:3:3:0:11 0/1:36:9:8:1:16:56.25%:33:4.0786E-4:36:7:5:2:18 0/1:35:8:7:1:10:80%:34:3.5723E-4:33:2:1:1:11 0/1:35:7:6:1:13:53.85%:25:2.6087E-3:34:6:5:1:15 0/1:35:8:7:1:13:61.54%:30:8.238E-4:36:5:4:1:15 0/1:37:14:12:2:23:60.87%:54:3.4067E-6:36:9:6:3:24 0/1:36:14:14:0:22:63.64%:55:2.7817E-6:36:8:7:1:22 0/1:37:15:12:3:18:83.33%:68:1.4655E-7:36:3:3:0:18 0/1:37:7:6:1:11:63.64%:27:1.935E-3:36:4:4:0:11 0/1:36:10:8:2:13:76.92%:42:5.3843E-5:36:3:3:0:13 0/1:36:9:8:1:14:64.29%:35:2.8986E-4:34:5:3:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:6:3:3:12:50%:21:6.865E-3:36:6:6:0:13 0/1:37:7:5:2:11:63.64%:27:1.935E-3:37:4:1:3:11 0/1:37:14:8:6:22:63.64%:55:2.7817E-6:36:8:5:3:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:9:7:2:16:56.25%:33:4.0786E-4:38:7:6:1:16 0/1:36:12:11:1:19:63.16%:47:1.8611E-5:37:7:2:5:20 0/1:37:9:9:0:15:60%:34:3.4983E-4:38:6:6:0:15 0/1:36:9:8:1:16:56.25%:33:4.0786E-4:36:7:6:1:16 MTB_anc 1191741 . G A . PASS AC=166;AF=0.557;AN=298;ANN=A|synonymous_variant|LOW|PE_PGRS20_Rv1068c|gene1091|transcript|Transcript_gene1091|Coding|1/1|c.408C>T|p.Tyr136Tyr|408/1392|408/1392|136/463||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1191741G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1191741G>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:41:37:18:19:42:88.1%:99:9.1365E-19:51:5:3:2:45 0/1:47:7:3:4:11:63.64%:27:1.935E-3:43:4:2:2:11 0/1:45:32:18:14:45:71.11%:99:3.0393E-14:42:13:7:6:46 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:42:24:14:10:33:72.73%:99:6.1763E-11:38:9:4:5:35 1/1:40:19:8:11:20:95%:98:1.5234E-10:38:1:0:1:20 0/1:47:22:8:14:32:68.75%:90:8.0292E-10:42:10:4:6:32 0/1:38:10:6:4:13:76.92%:42:5.3843E-5:45:3:1:2:13 0/1:45:18:11:7:28:64.29%:72:6.1806E-8:40:10:3:7:28 0/1:51:9:4:5:15:60%:34:3.4983E-4:44:6:2:4:16 0/1:39:6:1:5:10:60%:22:5.418E-3:43:4:2:2:10 0/1:41:43:21:22:51:84.31%:99:5.5491E-21:40:8:2:6:51 0/1:46:8:6:2:11:72.73%:32:5.16E-4:37:3:0:3:11 0/1:40:37:18:19:42:88.1%:99:3.5075E-19:37:4:2:2:42 0/1:46:17:7:10:21:80.95%:76:2.3502E-8:39:4:1:3:21 0/1:41:17:10:7:22:77.27%:74:3.8368E-8:38:5:2:3:22 0/1:46:13:4:9:15:86.67%:60:8.7675E-7:44:2:1:1:15 0/1:47:9:5:4:11:81.82%:39:1.1057E-4:38:2:0:2:11 0/1:49:12:3:9:15:80%:52:5.2605E-6:44:3:2:1:15 0/1:43:11:3:8:17:64.71%:43:4.3258E-5:46:6:3:3:18 0/1:40:12:5:7:15:80%:52:5.2605E-6:37:3:1:2:15 1/1:38:32:13:19:35:91.43%:99:7.5196E-17:52:3:1:2:36 0/1:46:13:7:6:18:72.22%:54:3.7078E-6:53:5:4:1:19 0/1:40:29:15:14:33:87.88%:99:9.1482E-15:37:4:1:3:34 0/1:41:31:15:16:40:77.5%:99:1.911E-14:37:9:5:4:42 0/1:42:19:12:7:23:82.61%:86:2.1316E-9:43:4:3:1:25 0/1:45:11:7:4:18:61.11%:42:5.2969E-5:53:7:6:1:20 0/1:46:13:6:7:18:72.22%:54:3.7078E-6:42:5:1:4:19 0/1:46:12:6:6:20:60%:46:2.2548E-5:41:8:3:5:20 0/1:44:23:10:13:31:74.19%:98:1.3219E-10:45:8:3:5:31 0/1:44:34:21:13:39:87.18%:99:3.9902E-17:58:5:5:0:41 0/1:43:25:12:13:33:75.76%:99:1.3235E-11:46:8:3:5:35 0/1:47:22:10:12:26:84.62%:99:5.5261E-11:58:4:2:2:27 0/1:43:15:8:7:22:68.18%:61:7.4178E-7:44:7:4:3:22 0/1:45:14:7:7:18:77.78%:60:8.0605E-7:41:4:2:2:19 0/1:40:20:5:15:26:76.92%:87:1.8273E-9:41:6:1:5:27 0/1:40:29:14:15:34:85.29%:99:2.0235E-14:39:5:2:3:35 0/1:47:23:6:17:30:76.67%:99:8.7055E-11:47:7:3:4:32 0/1:41:30:15:15:36:83.33%:99:1.1855E-14:42:6:3:3:37 0/1:42:34:19:15:48:70.83%:99:4.5188E-15:43:14:5:9:50 0/1:44:31:17:14:37:83.78%:99:3.4914E-15:41:6:2:4:38 0/1:41:36:24:12:41:87.8%:99:3.2269E-18:54:5:3:2:42 0/1:37:13:4:9:18:72.22%:54:3.7078E-6:46:5:2:3:19 0/1:44:11:6:5:15:73.33%:46:2.4988E-5:42:4:1:3:15 0/1:44:25:10:15:33:75.76%:99:1.3235E-11:39:8:4:4:33 0/1:40:21:10:11:26:80.77%:94:3.4262E-10:50:5:3:2:27 0/1:47:17:6:11:26:65.38%:68:1.4238E-7:41:9:3:6:26 0/1:43:32:13:19:41:78.05%:99:5.8981E-15:39:9:5:4:45 0/1:41:34:16:18:39:87.18%:99:3.9902E-17:41:5:3:2:39 0/1:46:25:15:10:30:83.33%:99:2.745E-12:42:5:2:3:31 0/1:45:6:5:1:13:46.15%:21:7.4534E-3:49:7:3:4:14 0/1:40:33:16:17:39:84.62%:99:2.9926E-16:35:6:2:4:40 1/1:45:19:13:6:21:90.48%:93:4.7003E-10:38:2:0:2:22 0/1:47:20:13:7:23:86.96%:95:3.1579E-10:52:3:2:1:23 0/1:44:23:11:12:29:79.31%:99:5.3984E-11:49:6:3:3:31 0/1:44:27:13:14:37:72.97%:99:2.9655E-12:37:10:2:8:38 0/1:44:28:15:13:33:84.85%:99:6.9527E-14:40:5:0:5:34 0/1:45:16:11:5:20:80%:71:7.7086E-8:43:4:1:3:20 0/1:44:29:10:19:36:80.56%:99:7.2821E-14:41:7:1:6:36 0/1:39:15:6:9:22:68.18%:61:7.4178E-7:44:7:3:4:22 0/1:46:25:9:16:32:78.12%:99:8.3928E-12:40:7:3:4:33 0/1:43:30:12:18:36:83.33%:99:1.1855E-14:35:6:1:5:38 1/1:42:24:8:16:26:92.31%:99:7.6222E-13:37:2:0:2:26 0/1:47:16:9:7:27:59.26%:62:6.1806E-7:39:11:7:4:27 0/1:47:34:17:17:41:82.93%:99:1.7333E-16:43:7:4:3:42 0/1:42:40:21:19:45:88.89%:99:2.0407E-20:50:5:3:2:46 0/1:43:18:8:10:26:69.23%:74:3.6611E-8:43:8:4:4:26 0/1:42:21:7:14:28:75%:90:8.7917E-10:40:7:0:7:28 0/1:43:7:3:4:10:70%:28:1.548E-3:45:3:1:2:10 0/1:47:9:5:4:13:69.23%:36:2.2883E-4:38:4:1:3:14 0/1:45:28:17:11:37:75.68%:99:6.3095E-13:39:9:5:4:38 0/1:49:11:7:4:18:61.11%:42:5.2969E-5:50:7:1:6:18 0/1:48:15:7:8:18:83.33%:68:1.4655E-7:49:3:2:1:19 0/1:45:25:11:14:33:75.76%:99:1.3235E-11:46:8:3:5:33 0/1:44:26:14:12:32:81.25%:99:1.5064E-12:37:6:3:3:34 0/1:42:21:15:6:25:84%:97:1.8789E-10:43:4:2:2:25 0/1:40:27:12:15:34:79.41%:99:7.9014E-13:44:7:2:5:34 0/1:43:22:11:11:35:62.86%:87:1.7197E-9:46:13:6:7:35 0/1:42:20:10:10:33:60.61%:78:1.4096E-8:40:13:4:9:33 0/1:44:15:9:6:22:68.18%:61:7.4178E-7:47:7:2:5:24 0/1:40:23:9:14:29:79.31%:99:5.3984E-11:40:6:1:5:29 0/1:44:31:13:18:41:75.61%:99:3.008E-14:37:10:4:6:42 0/1:46:17:7:10:21:80.95%:76:2.3502E-8:53:4:2:2:23 1/1:46:19:8:11:21:90.48%:93:4.7003E-10:60:2:1:1:21 1/1:40:15:9:6:16:93.75%:75:2.8282E-8:37:1:0:1:16 0/1:43:15:6:9:22:68.18%:61:7.4178E-7:42:7:4:3:23 0/1:43:22:8:14:28:78.57%:97:1.7583E-10:37:6:1:5:28 1/1:41:13:5:8:14:92.86%:64:3.7391E-7:60:1:1:0:14 0/1:43:14:6:8:17:82.35%:63:4.8851E-7:52:3:2:1:18 1/1:44:19:10:9:21:90.48%:93:4.7003E-10:49:2:1:1:21 0/1:45:30:14:16:42:71.43%:99:2.043E-13:44:12:3:9:42 0/1:46:10:5:5:13:76.92%:42:5.3843E-5:53:3:2:1:14 1/1:41:39:22:17:42:92.86%:99:8.4519E-21:44:3:2:1:42 1/1:44:28:15:13:31:90.32%:99:1.2857E-14:45:3:1:2:31 0/1:43:37:16:21:46:80.43%:99:1.5478E-17:42:9:3:6:46 0/1:46:12:7:5:18:66.67%:48:1.4831E-5:48:6:2:4:18 0/1:39:20:9:11:26:76.92%:87:1.8273E-9:41:6:1:5:29 0/1:42:28:18:10:34:82.35%:99:1.349E-13:41:6:2:4:35 0/1:40:36:15:21:42:85.71%:99:7.3092E-18:41:6:1:5:44 1/1:41:25:13:12:26:96.15%:99:5.4444E-14:37:1:0:1:26 0/1:40:21:7:14:24:87.5%:99:9.0704E-11:38:3:0:3:24 1/1:43:43:24:19:45:95.56%:99:1.0412E-23:38:2:0:2:47 0/1:40:29:14:15:34:85.29%:99:2.0235E-14:42:5:2:3:34 0/1:41:20:8:12:26:76.92%:87:1.8273E-9:37:6:1:5:26 0/1:40:9:5:4:14:64.29%:35:2.8986E-4:36:5:0:5:14 0/1:43:24:15:9:28:85.71%:99:4.7015E-12:48:4:2:2:28 0/1:39:21:9:12:25:84%:97:1.8789E-10:43:4:2:2:26 0/1:45:34:23:11:41:82.93%:99:1.7333E-16:55:7:4:3:43 0/1:45:28:8:20:33:84.85%:99:6.9527E-14:49:5:2:3:36 0/1:43:32:17:15:44:72.73%:99:2.1273E-14:45:12:5:7:45 0/1:44:29:14:15:34:85.29%:99:2.0235E-14:35:5:1:4:35 0/1:44:25:12:13:37:67.57%:99:5.2839E-11:41:12:4:8:37 0/1:40:21:10:11:29:72.41%:88:1.2841E-9:36:8:5:3:29 0/1:41:26:10:16:36:72.22%:99:9.2118E-12:46:10:6:4:37 0/1:41:29:16:13:38:76.32%:99:1.977E-13:34:9:4:5:40 0/1:38:27:14:13:31:87.1%:99:1.125E-13:43:4:3:1:35 0/1:38:26:8:18:36:72.22%:99:9.2118E-12:39:10:4:6:38 0/1:39:26:9:17:34:76.47%:99:4.1482E-12:38:8:2:6:36 0/1:40:21:8:13:30:70%:87:1.7919E-9:38:9:3:6:30 0/1:44:38:20:18:45:84.44%:99:1.2885E-18:47:7:4:3:46 0/1:41:40:14:26:47:85.11%:99:1.0894E-19:37:7:5:2:47 0/1:39:26:13:13:34:76.47%:99:4.1482E-12:48:8:2:6:34 0/1:43:29:14:15:35:82.86%:99:4.008E-14:39:6:2:4:37 0/1:38:18:10:8:29:62.07%:71:7.6888E-8:37:11:3:8:29 0/1:42:15:8:7:18:83.33%:68:1.4655E-7:44:3:0:3:19 0/1:40:30:16:14:37:81.08%:99:2.1946E-14:36:7:3:4:38 1/1:38:25:14:11:27:92.59%:99:2.0853E-13:32:2:1:1:27 0/1:39:25:17:8:30:83.33%:99:2.745E-12:34:5:2:3:30 1/1:41:30:16:14:33:90.91%:99:9.89E-16:37:3:0:3:34 0/1:40:19:11:8:23:82.61%:86:2.1316E-9:37:4:0:4:23 0/1:38:20:9:11:26:76.92%:87:1.8273E-9:38:6:4:2:27 0/1:40:33:16:17:42:78.57%:99:1.8121E-15:42:9:5:4:44 0/1:37:19:12:7:23:82.61%:86:2.1316E-9:43:4:2:2:24 0/1:41:20:6:14:27:74.07%:85:2.7631E-9:40:7:3:4:29 0/1:41:12:4:8:16:75%:50:8.0605E-6:36:4:1:3:16 0/1:41:31:17:14:37:83.78%:99:3.4914E-15:41:6:5:1:38 0/1:39:26:18:8:33:78.79%:99:2.5824E-12:37:7:3:4:33 1/1:38:14:6:8:15:93.33%:69:1.0315E-7:37:1:1:0:15 0/1:40:27:16:11:31:87.1%:99:1.125E-13:36:4:2:2:31 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 0/1:46:21:11:10:26:80.77%:94:3.4262E-10:42:5:3:2:27 0/1:46:11:3:8:14:78.57%:47:1.6951E-5:45:3:1:2:14 0/1:42:18:10:8:23:78.26%:79:1.1937E-8:42:5:2:3:23 0/1:44:22:10:12:26:84.62%:99:5.5261E-11:38:4:0:4:26 1/1:41:22:10:12:24:91.67%:99:1.0078E-11:38:2:1:1:26 0/1:41:12:6:6:15:80%:52:5.2605E-6:43:3:1:2:15 0/1:43:24:12:12:29:82.76%:99:9.2544E-12:40:5:3:2:29 0/1:45:33:18:15:40:82.5%:99:5.85E-16:45:7:4:3:40 0/1:42:34:22:12:40:85%:99:8.7127E-17:39:6:3:3:41 0/1:36:17:9:8:21:80.95%:76:2.3502E-8:37:4:1:3:22 MTB_anc 1191817 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|PE_PGRS20_Rv1068c|gene1091|transcript|Transcript_gene1091|Coding|1/1|c.332T>G|p.Leu111Trp|332/1392|332/1392|111/463||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1191817A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1191817A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:3:1:2:47:6.38%:59:1.2097E-1:42:44:23:21:47 0/0:39:2:1:1:18:11.11%:18:2.4286E-1:50:16:7:9:18 0/0:38:3:1:2:44:6.82%:53:1.2069E-1:46:41:21:20:44 0/0:0:0:0:0:12:0%:21:1E0:48:12:9:3:12 0/0:37:2:1:1:35:5.71%:47:2.4638E-1:41:33:15:18:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:38:4:2:2:31:12.9%:29:5.6405E-2:52:27:11:16:31 0/0:38:3:1:2:15:20%:11:1.1207E-1:38:12:5:7:16 0/0:38:5:2:3:23:21.74%:14:2.4548E-2:46:18:13:5:23 0/0:39:1:0:1:20:5%:27:5E-1:49:19:8:11:20 0/0:32:1:0:1:13:7.69%:18:5E-1:47:12:4:8:13 0/0:37:6:1:5:51:11.76%:47:1.3375E-2:42:45:25:20:52 0/0:34:1:0:1:11:9.09%:14:5E-1:47:10:4:6:12 0/0:38:2:1:1:45:4.44%:64:2.4719E-1:42:43:22:21:45 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:39:1:0:1:23:4.35%:34:5E-1:43:22:10:12:23 0/0:0:0:0:0:16:0%:29:1E0:45:16:4:12:17 0/0:38:2:0:2:16:12.5%:15:2.4194E-1:43:14:9:5:17 0/0:39:1:1:0:18:5.56%:24:5E-1:41:17:5:12:18 0/0:34:1:1:0:11:9.09%:14:5E-1:44:10:2:8:12 0/0:37:1:1:0:19:5.26%:28:5E-1:43:18:9:9:19 0/0:36:2:1:1:38:5.26%:50:2.4667E-1:41:36:14:22:39 0/0:37:1:1:0:18:5.56%:24:5E-1:44:17:6:11:18 0/0:33:3:1:2:39:7.69%:47:1.2013E-1:44:36:15:21:39 0/0:38:4:1:3:40:10%:40:5.7784E-2:41:36:18:18:41 0/0:37:3:3:0:25:12%:25:1.1735E-1:45:22:11:11:25 0/0:35:2:1:1:20:10%:21:2.4359E-1:40:18:9:9:20 0/0:37:5:1:4:22:22.73%:12:2.4248E-2:48:17:9:8:22 0/0:39:2:1:1:20:10%:21:2.4359E-1:43:18:8:10:20 0/0:38:4:1:3:25:16%:21:5.4928E-2:45:21:11:10:25 0/0:38:2:2:0:50:4%:70:2.4747E-1:42:48:28:20:51 0/0:36:3:0:3:33:9.09%:37:1.1923E-1:41:30:15:15:33 0/0:39:1:0:1:28:3.57%:41:5E-1:47:27:13:14:28 0/0:38:3:2:1:28:10.71%:28:1.1818E-1:43:25:10:15:28 0/0:36:2:2:0:20:10%:21:2.4359E-1:45:18:9:9:20 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:38:1:1:0:34:2.94%:51:5E-1:45:33:17:16:34 0/0:38:4:1:3:40:10%:40:5.7784E-2:45:36:12:24:40 0/0:37:5:2:3:36:13.89%:29:2.6944E-2:46:31:14:17:36 0/0:37:5:1:4:40:12.5%:35:2.7371E-2:43:35:16:19:41 0/0:36:3:1:2:39:7.69%:47:1.2013E-1:43:36:18:18:40 0/0:38:3:2:1:46:6.52%:56:1.2088E-1:43:43:27:16:48 0/0:37:3:2:1:20:15%:16:1.1538E-1:40:17:7:10:20 0/0:38:3:1:2:30:10%:31:1.1864E-1:41:27:17:10:31 0/0:38:4:1:3:39:10.26%:41:5.7662E-2:42:35:17:18:39 0/0:38:2:0:2:29:6.9%:37:2.4561E-1:42:27:13:14:29 0/0:34:1:0:1:26:3.85%:38:5E-1:46:25:10:15:26 0/0:38:2:1:1:48:4.17%:67:2.4737E-1:41:46:21:25:49 0/0:36:2:1:1:37:5.41%:50:2.4658E-1:47:35:22:13:37 0/0:35:2:1:1:33:6.06%:44:2.4615E-1:47:31:17:14:33 0/0:38:2:1:1:16:12.5%:15:2.4194E-1:44:14:11:3:16 0/0:35:2:0:2:39:5.13%:54:2.4675E-1:42:37:16:21:39 0/0:39:1:0:1:20:5%:27:5E-1:41:19:9:10:21 0/0:38:2:1:1:25:8%:31:2.449E-1:45:23:13:10:25 0/0:38:3:1:2:27:11.11%:28:1.1792E-1:42:24:10:14:28 0/0:39:3:1:2:41:7.32%:50:1.2037E-1:42:38:18:20:43 0/0:38:2:0:2:36:5.56%:47:2.4648E-1:43:34:18:16:36 0/0:39:1:0:1:23:4.35%:34:5E-1:40:22:16:6:25 0/0:45:3:1:2:38:7.89%:43:1.2E-1:45:35:15:20:38 0/0:38:2:1:1:24:8.33%:27:2.4468E-1:46:22:12:10:24 0/0:35:2:1:1:32:6.25%:40:2.4603E-1:47:30:11:19:32 0/0:39:4:0:4:41:9.76%:44:5.79E-2:42:37:14:23:42 0/0:39:1:0:1:29:3.45%:45:5E-1:43:28:10:18:29 0/0:38:2:1:1:23:8.7%:28:2.4444E-1:41:21:12:9:25 0/0:38:3:2:1:40:7.5%:46:1.2025E-1:44:37:19:18:41 0/0:39:3:1:2:52:5.77%:66:1.2136E-1:42:49:24:25:52 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:38:5:0:5:30:16.67%:21:2.6093E-2:42:25:9:16:30 0/0:39:1:0:1:12:8.33%:14:5E-1:48:11:5:6:12 0/0:37:1:0:1:17:5.88%:24:5E-1:47:16:11:5:17 0/0:37:4:2:2:37:10.81%:38:5.7399E-2:43:33:18:15:38 0/0:37:3:1:2:18:16.67%:14:1.1429E-1:53:15:9:6:18 0/0:38:1:0:1:15:6.67%:21:5E-1:50:14:6:8:15 0/0:37:4:0:4:30:13.33%:26:5.62E-2:44:26:13:13:30 0/0:39:2:1:1:39:5.13%:54:2.4675E-1:40:37:19:18:41 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:25 0/0:37:5:2:3:30:16.67%:21:2.6093E-2:45:25:10:15:31 0/0:38:5:2:3:30:16.67%:21:2.6093E-2:45:25:14:11:31 0/0:35:4:0:4:29:13.79%:26:5.5981E-2:42:25:13:12:31 0/0:39:2:1:1:22:9.09%:24:2.4419E-1:46:20:14:6:23 0/0:39:2:0:2:30:6.67%:37:2.4576E-1:43:28:12:16:30 0/0:39:1:1:0:42:2.38%:66:5E-1:42:41:15:26:42 0/0:36:3:1:2:32:9.38%:34:1.1905E-1:43:29:10:19:32 0/0:39:2:1:1:25:8%:31:2.449E-1:45:23:9:14:25 0/0:39:1:0:1:24:4.17%:34:5E-1:39:23:13:10:24 0/0:38:3:2:1:29:10.34%:31:1.1842E-1:39:26:10:16:29 0/0:36:3:0:3:30:10%:31:1.1864E-1:42:27:12:15:30 0/0:39:1:1:0:19:5.26%:28:5E-1:48:18:5:13:19 0/0:39:1:0:1:20:5%:27:5E-1:44:19:10:9:20 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/1:38:8:2:6:41:19.51%:25:2.6808E-3:44:33:19:14:42 0/0:37:1:1:0:16:6.25%:21:5E-1:49:15:9:6:16 0/0:39:2:1:1:44:4.55%:60:2.4713E-1:39:42:24:18:45 0/0:39:1:1:0:30:3.33%:44:5E-1:45:29:17:12:30 0/0:38:5:1:4:50:10%:49:2.8142E-2:44:45:19:26:51 0/0:39:3:1:2:20:15%:16:1.1538E-1:45:17:11:6:20 0/0:37:4:1:3:36:11.11%:34:5.7257E-2:39:32:10:22:36 0/0:37:4:1:3:42:9.52%:43:5.801E-2:43:38:26:12:42 0/0:37:4:0:4:41:9.76%:44:5.79E-2:41:37:12:25:41 0/0:39:1:0:1:31:3.23%:48:5E-1:41:30:12:18:33 0/0:36:3:0:3:30:10%:31:1.1864E-1:43:27:11:16:30 0/0:38:2:1:1:47:4.26%:67:2.4731E-1:44:45:23:22:47 0/0:35:2:0:2:34:5.88%:43:2.4627E-1:42:32:19:13:35 0/0:34:2:1:1:30:6.67%:37:2.4576E-1:41:28:9:19:30 0/0:39:1:0:1:11:9.09%:14:5E-1:49:10:5:5:14 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:39:3:1:2:31:9.68%:34:1.1885E-1:42:28:13:15:31 0/0:38:1:1:0:41:2.44%:66:5E-1:44:40:30:10:42 0/0:38:1:0:1:38:2.63%:58:5E-1:46:37:12:25:38 0/0:37:4:1:3:46:8.7%:49:5.8402E-2:45:42:24:18:46 0/0:38:1:0:1:37:2.7%:59:5E-1:43:36:17:19:37 0/1:37:7:2:5:40:17.5%:22:5.8688E-3:44:33:13:20:40 0/0:37:1:0:1:29:3.45%:45:5E-1:40:28:13:15:30 0/0:39:1:1:0:33:3.03%:52:5E-1:46:32:15:17:33 0/0:38:5:0:5:37:13.51%:32:2.706E-2:43:32:19:13:38 0/0:38:2:1:1:39:5.13%:54:2.4675E-1:39:37:15:22:40 0/0:37:5:1:4:45:11.11%:44:2.7799E-2:38:40:16:24:45 0/0:39:4:1:3:31:12.9%:29:5.6405E-2:42:27:9:18:31 0/0:36:3:1:2:35:8.57%:40:1.1957E-1:43:32:13:19:35 0/0:38:1:0:1:40:2.5%:62:5E-1:46:39:17:22:41 0/0:36:2:1:1:46:4.35%:63:2.4725E-1:43:44:17:27:46 0/0:38:2:0:2:35:5.71%:47:2.4638E-1:38:33:18:15:36 0/0:39:1:1:0:35:2.86%:55:5E-1:44:34:17:17:35 0/0:38:4:0:4:33:12.12%:32:5.6777E-2:38:29:17:12:34 0/0:38:3:0:3:27:11.11%:28:1.1792E-1:41:24:9:15:27 0/0:37:2:1:1:45:4.44%:64:2.4719E-1:42:43:22:21:46 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:33 0/0:38:3:1:2:34:8.82%:37:1.194E-1:41:31:20:11:35 0/0:39:1:0:1:32:3.12%:48:5E-1:39:31:16:15:32 0/0:39:2:0:2:27:7.41%:34:2.4528E-1:40:25:14:11:28 0/0:35:2:0:2:28:7.14%:34:2.4545E-1:38:26:11:15:29 0/0:38:5:2:3:46:10.87%:44:2.7874E-2:41:41:23:18:47 0/0:38:3:2:1:25:12%:25:1.1735E-1:41:22:16:6:26 0/0:38:3:0:3:34:8.82%:37:1.194E-1:40:31:10:21:34 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 0/0:38:1:1:0:41:2.44%:66:5E-1:41:40:21:19:41 0/0:38:4:1:3:40:10%:40:5.7784E-2:39:36:23:13:41 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:26 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:35:2:0:2:31:6.45%:40:2.459E-1:45:29:17:12:31 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:37:2:1:1:26:7.69%:30:2.451E-1:41:24:13:11:26 0/0:39:2:0:2:30:6.67%:37:2.4576E-1:41:28:15:13:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:36:2:1:1:18:11.11%:18:2.4286E-1:41:16:7:9:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:39:3:2:1:40:7.5%:46:1.2025E-1:43:37:23:14:40 0/0:38:2:1:1:52:3.85%:74:2.4757E-1:42:50:29:21:52 0/0:38:2:0:2:24:8.33%:27:2.4468E-1:45:22:11:11:24 MTB_anc 1197472 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv1073_Rv1073|gene1096|transcript|Transcript_gene1096|Coding|1/1|c.242A>C|p.Glu81Ala|242/852|242/852|81/283||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1197472A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1197472A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:46 0/0:0:0:0:0:25:0%:48:1E0:50:25:14:11:26 0/0:0:0:0:0:63:0%:99:1E0:47:63:34:29:64 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:41:0%:78:1E0:48:41:15:26:41 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:38 0/0:0:0:0:0:44:0%:81:1E0:49:44:23:21:44 0/0:0:0:0:0:34:0%:62:1E0:48:34:10:24:35 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:43 0/0:0:0:0:0:23:0%:44:1E0:52:23:10:13:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:38 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:46 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:30 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:36:1:1:0:49:2.04%:80:5E-1:44:48:30:18:49 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:42 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:34 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:18:0%:32:1E0:47:18:14:4:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:30 0/0:0:0:0:0:26:0%:47:1E0:48:26:8:18:26 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:19 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:28:0%:51:1E0:49:28:11:17:28 0/0:0:0:0:0:42:0%:77:1E0:52:42:25:17:43 0/0:0:0:0:0:38:0%:70:1E0:47:38:14:24:39 0/0:0:0:0:0:45:0%:85:1E0:47:45:24:21:45 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:41 0/0:0:0:0:0:73:0%:99:1E0:47:73:34:39:75 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:44 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:38 0/0:0:0:0:0:30:0%:55:1E0:47:30:11:19:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:36 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:40:0%:74:1E0:46:40:15:25:41 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:60:1:0:1:40:2.5%:62:5E-1:40:39:15:24:40 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:37 0/0:0:0:0:0:56:0%:99:1E0:45:56:27:29:57 0/0:0:0:0:0:59:0%:99:1E0:48:59:30:29:60 0/1:45:12:6:6:46:26.09%:39:1.0724E-4:45:34:19:15:46 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:41 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:41 0/0:0:0:0:0:66:0%:99:1E0:46:66:37:29:66 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:46:42:27:15:45 0/0:0:0:0:0:16:0%:29:1E0:46:16:11:5:16 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:33:0%:63:1E0:52:33:12:21:33 0/0:0:0:0:0:25:0%:48:1E0:53:25:15:10:26 0/0:0:0:0:0:47:0%:89:1E0:51:47:22:25:47 0/0:0:0:0:0:47:0%:89:1E0:43:47:29:18:49 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:30 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:43 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:42 0/0:0:0:0:0:37:0%:70:1E0:48:37:24:13:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:35 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:32 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:55:0%:99:1E0:47:55:27:28:55 0/0:0:0:0:0:36:0%:66:1E0:50:36:18:18:36 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:41 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 0/0:0:0:0:0:52:0%:96:1E0:44:52:29:23:54 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:40 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:21 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:43 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:48 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:51 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:41 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:56:0%:99:1E0:44:56:24:32:56 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:54 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:8:22:31 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:53 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:47 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:46 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:45 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:37 0/0:0:0:0:0:43:0%:82:1E0:39:43:18:25:45 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:42 0/0:0:0:0:0:48:0%:89:1E0:40:48:19:29:49 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:44 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:39 0/0:0:0:0:0:54:0%:99:1E0:39:54:25:29:54 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:51 0/0:0:0:0:0:58:0%:99:1E0:41:58:29:29:60 0/0:0:0:0:0:51:0%:97:1E0:42:51:19:32:51 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:40 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:52:0%:96:1E0:42:52:23:29:53 0/0:0:0:0:0:50:0%:92:1E0:40:50:22:28:50 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:41 0/0:0:0:0:0:67:0%:99:1E0:44:67:29:38:70 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:32 MTB_anc 1198754 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|fadA3_Rv1074c|gene1097|transcript|Transcript_gene1097|Coding|1/1|c.620A>G|p.Asn207Ser|620/1218|620/1218|207/405||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1198754T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1198754T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:64:0%:99:1E0:44:64:32:32:65 0/0:0:0:0:0:16:0%:29:1E0:51:16:4:12:16 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:48 0/0:0:0:0:0:29:0%:55:1E0:47:29:18:11:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:8:19:27 0/0:0:0:0:0:28:0%:51:1E0:50:28:10:18:28 0/0:0:0:0:0:38:0%:70:1E0:51:38:15:23:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:22 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:40 0/0:0:0:0:0:19:0%:37:1E0:47:19:13:6:20 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:44 0/0:0:0:0:0:20:0%:36:1E0:47:20:5:15:21 0/0:0:0:0:0:26:0%:47:1E0:49:26:10:16:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:8:16:25 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:20 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:46:0%:85:1E0:43:46:29:17:46 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:49:0%:93:1E0:44:49:30:19:49 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:19:0%:37:1E0:49:19:13:6:19 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:0:0:0:0:26:0%:47:1E0:45:26:18:8:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:42:0%:77:1E0:48:42:20:22:43 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:37:0%:70:1E0:48:37:16:21:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:56:0%:99:1E0:45:56:23:33:56 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:46 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:46 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:44 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:44 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:36 0/0:0:0:0:0:10:0%:17:1E0:53:10:6:4:10 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:44 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:48 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:52 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:42 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:58:0%:99:1E0:46:58:34:24:58 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:16:0%:29:1E0:51:16:6:10:16 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:16 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:21:0%:40:1E0:47:21:15:6:21 0/0:0:0:0:0:38:0%:70:1E0:49:38:16:22:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:45 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:32 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 1/1:42:27:11:16:28:96.43%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:27 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:42 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:23 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:52:0%:96:1E0:42:52:32:20:53 0/0:0:0:0:0:17:0%:33:1E0:44:17:12:5:17 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:45 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:12:0%:21:1E0:49:12:6:6:14 0/0:0:0:0:0:11:0%:22:1E0:45:11:3:8:11 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:21:6:28 0/0:37:1:1:0:23:4.35%:34:5E-1:44:22:11:11:24 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:34 0/0:0:0:0:0:48:0%:89:1E0:40:48:20:28:51 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:21:10:31 0/0:0:0:0:0:68:0%:99:1E0:42:68:38:30:69 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:56 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:53 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:28:18:49 0/0:0:0:0:0:39:0%:74:1E0:38:39:20:19:40 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:43 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:35 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:43 0/0:0:0:0:0:42:0%:77:1E0:40:42:13:29:44 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:45 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:40 0/0:0:0:0:0:68:0%:99:1E0:39:68:42:26:70 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:47 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:45:0%:85:1E0:41:45:15:30:45 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:30 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:46 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:50 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 MTB_anc 1203824 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1078_Rv1078|gene1101|transcript|Transcript_gene1101|Coding|1/1|c.512C>T|p.Thr171Ile|512/723|512/723|171/240||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1203824C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1203824C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:54:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:51:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:50:26:24:51:98.04%:99:1.3013E-28:38:1:0:1:51 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:49:16:33:49:100%:99:3.925E-29:0:0:0:0:51 1/1:49:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:51:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:50:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:50:16:34:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:45:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:66:39:27:66:100%:99:2.6498E-39:0:0:0:0:69 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 1211369 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1086_Rv1086|gene1109|transcript|Transcript_gene1109|Coding|1/1|c.775C>A|p.Arg259Ser|775/789|775/789|259/262||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1211369C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1211369C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:49:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:53:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:53:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:51:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:30:16:14:31:96.77%:99:6.8754E-17:60:1:0:1:32 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:51:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:52:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:51:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:50:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:54:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:54:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:60:27:33:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:53:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 1211871 . C T . PASS AC=2;AF=6.711e-03;AN=298;ANN=T|synonymous_variant|LOW|PE_PGRS21_Rv1087|gene1110|transcript|Transcript_gene1110|Coding|1/1|c.312C>T|p.Asp104Asp|312/2304|312/2304|104/767||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1211871C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1211871C>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:12:0%:21:1E0:50:12:7:5:15 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:29 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:21 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:22 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:21 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:18 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:19 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:28 0/0:0:0:0:0:10:0%:17:1E0:46:10:6:4:12 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:43 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:23 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:20 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:17 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:10 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:21 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:19 0/0:0:0:0:0:52:0%:96:1E0:40:52:26:26:52 0/0:0:0:0:0:13:0%:25:1E0:43:13:6:7:15 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:35 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:34 0/0:0:0:0:0:12:0%:21:1E0:40:12:6:6:12 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:20 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:45 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:36 0/0:0:0:0:0:24:0%:44:1E0:38:24:15:9:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:28 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:18 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:19 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:34 0/0:0:0:0:0:44:0%:81:1E0:38:44:21:23:46 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:25 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:37:34:18:16:36 0/0:0:0:0:0:36:0%:66:1E0:37:36:16:20:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:8:0%:14:1E0:45:8:5:3:8 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:37 0/0:0:0:0:0:21:0%:40:1E0:39:21:15:6:21 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:28 0/0:0:0:0:0:19:0%:37:1E0:40:19:12:7:19 0/0:0:0:0:0:38:0%:70:1E0:38:38:12:26:42 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:23 0/0:0:0:0:0:22:0%:40:1E0:39:22:8:14:22 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:25 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:33 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:17 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:26 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:15:0%:29:1E0:47:15:8:7:18 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:19:0%:37:1E0:41:19:14:5:19 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:32 0/0:0:0:0:0:29:0%:55:1E0:36:29:15:14:31 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:18 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:11:0%:22:1E0:46:11:3:8:13 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:19 0/0:0:0:0:0:27:0%:52:1E0:41:27:7:20:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:32 0/0:0:0:0:0:10:0%:17:1E0:43:10:5:5:10 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:19 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:19 0/0:0:0:0:0:42:0%:77:1E0:39:42:25:17:45 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:20 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:18 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:40 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:38 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:21 0/0:0:0:0:0:30:0%:55:1E0:40:30:8:22:33 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:19 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:27 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:12:24:36 0/0:0:0:0:0:33:0%:63:1E0:38:33:20:13:33 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:46 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:39 0/0:0:0:0:0:29:0%:55:1E0:36:29:15:14:30 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:45 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:23 0/0:0:0:0:0:36:0%:66:1E0:37:36:19:17:39 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:22 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:32 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:21 0/0:0:0:0:0:33:0%:63:1E0:39:33:10:23:35 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:26 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:25 0/0:0:0:0:0:31:0%:59:1E0:37:31:11:20:35 0/0:0:0:0:0:29:0%:55:1E0:37:29:12:17:33 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:30 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:22 0/0:0:0:0:0:25:0%:48:1E0:36:25:11:14:26 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:28 0/0:0:0:0:0:15:0%:29:1E0:35:15:7:8:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:21 0/0:0:0:0:0:17:0%:33:1E0:39:17:4:13:17 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:18 0/0:0:0:0:0:15:0%:29:1E0:39:15:4:11:15 0/0:0:0:0:0:26:0%:47:1E0:38:26:3:23:26 0/0:0:0:0:0:22:0%:40:1E0:39:22:5:17:25 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:26 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:26 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:18 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:20 0/0:37:1:0:1:21:4.76%:31:5E-1:40:20:9:11:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:30 0/0:0:0:0:0:34:0%:62:1E0:38:34:10:24:35 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:19 MTB_anc 1212343 . T G . PASS AC=161;AF=0.994;AN=162;ANN=G|missense_variant|MODERATE|PE_PGRS21_Rv1087|gene1110|transcript|Transcript_gene1110|Coding|1/1|c.784T>G|p.Ser262Ala|784/2304|784/2304|262/767||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1212343T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1212343T>G||||||;WT=0;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:10:1:9:11:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:11:1:10:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:8:2:6:9:100%:41:7.77E-5:0:0:0:0:10 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:35:7:1:6:8:87.5%:31:6.993E-4:38:1:1:0:9 1/1:30:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. 1/1:34:10:1:9:11:90.91%:47:1.7011E-5:38:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:24:0:24:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:22:1:21:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:39:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1213024 . G A . PASS AC=250;AF=1.00;AN=250;ANN=A|missense_variant|MODERATE|PE_PGRS21_Rv1087|gene1110|transcript|Transcript_gene1110|Coding|1/1|c.1465G>A|p.Ala489Thr|1465/2304|1465/2304|489/767||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1213024G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1213024G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:9:4:5:10:90%:42:5.9538E-5:32:1:0:1:10 1/1:39:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:11:3:8:12:91.67%:53:4.8074E-6:32:1:1:0:13 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:12:2:10:12:100%:64:3.698E-7:0:0:0:0:15 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:13:5:8:14:92.86%:64:3.7391E-7:36:1:0:1:14 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 MTB_anc 1213025 . C A . PASS AC=257;AF=0.996;AN=258;ANN=A|missense_variant|MODERATE|PE_PGRS21_Rv1087|gene1110|transcript|Transcript_gene1110|Coding|1/1|c.1466C>A|p.Ala489Asp|1466/2304|1466/2304|489/767||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1213025C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1213025C>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 0/1:38:8:4:4:9:88.89%:36:2.0568E-4:32:1:0:1:10 1/1:40:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:12:5:7:13:92.31%:58:1.3461E-6:32:1:1:0:14 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 MTB_anc 1213406 . T C . PASS AC=294;AF=1.00;AN=294;ANN=C|missense_variant|MODERATE|PE_PGRS21_Rv1087|gene1110|transcript|Transcript_gene1110|Coding|1/1|c.1847T>C|p.Val616Ala|1847/2304|1847/2304|616/767||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1213406T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1213406T>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:39:16:23:40:97.5%:99:3.8137E-22:60:1:0:1:46 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:44:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:51:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:44:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:46:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:51:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:48:25:23:49:100%:99:1.554E-28:0:0:0:0:54 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:22:9:13:23:95.65%:99:4.7526E-13:0:0:0:0:26 1/1:40:21:11:10:22:95.45%:99:1.0931E-11:37:1:0:1:25 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:27 1/1:43:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:28 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:30 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:26:13:13:27:96.3%:99:1.4382E-14:32:1:0:1:31 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:25:10:15:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:22:8:14:23:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:48:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:34 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:34:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:28 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:29 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:37:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:19 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:35:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:20 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:13:6:7:14:92.86%:70:9.6148E-8:0:0:0:0:17 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:46:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:27 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:33:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:34:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:22 MTB_anc 1213693 . G C . PASS AC=3;AF=0.027;AN=112;ANN=C|missense_variant|MODERATE|PE_PGRS21_Rv1087|gene1110|transcript|Transcript_gene1110|Coding|1/1|c.2134G>C|p.Ala712Pro|2134/2304|2134/2304|712/767||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1213693G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1213693G>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. 0/0:46:4:1:3:13:30.77%:4:4.6584E-2:42:8:4:4:14 0/0:48:2:0:2:9:22.22%:5:2.3333E-1:38:6:5:1:10 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:35:8:2:6:12:66.67%:31:6.7304E-4:36:4:2:2:14 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:52:3:1:2:12:25%:6:1.087E-1:40:9:3:6:12 0/0:55:5:4:1:12:41.67%:3:1.8634E-2:36:7:1:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:52:3:2:1:19:15.79%:14:1.1429E-1:34:15:7:8:20 0/0:60:1:1:0:8:12.5%:8:5E-1:40:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:45:5:5:0:15:33.33%:3:1.7544E-2:37:6:1:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:48:2:0:2:20:10%:21:2.4324E-1:37:17:5:12:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:44:6:2:4:18:33.33%:21:7.4534E-3:40:7:3:4:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:45:5:3:2:13:38.46%:4:1.9565E-2:35:8:3:5:13 0/0:60:3:2:1:11:27.27%:4:1.0526E-1:34:7:4:3:12 0/0:33:1:0:1:9:11.11%:8:5E-1:33:7:4:3:10 0/0:49:1:1:0:13:7.69%:18:5E-1:34:12:6:6:14 0/0:51:3:1:2:14:21.43%:9:1.1111E-1:36:11:5:6:15 0/0:52:3:2:1:10:30%:4:1.0526E-1:35:7:4:3:10 0/0:48:2:2:0:11:18.18%:7:2.3684E-1:33:8:5:3:12 0/0:52:3:3:0:12:25%:7:1.0714E-1:36:8:4:4:12 0/0:52:3:2:1:12:25%:4:1.0526E-1:35:7:5:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:48:2:1:1:10:20%:5:2.3333E-1:35:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 0/0:60:1:0:1:8:12.5%:8:5E-1:34:7:5:2:9 0/0:51:3:1:2:10:30%:4:1.0526E-1:34:7:4:3:10 0/0:60:1:1:0:9:11.11%:11:5E-1:37:8:6:2:10 0/0:60:1:1:0:18:5.56%:24:5E-1:35:17:13:4:18 0/0:46:4:0:4:10:40%:3:4.3344E-2:36:6:4:2:13 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:38:7:4:3:9 0/0:41:4:3:1:27:14.81%:20:5.5222E-2:37:22:11:11:27 0/0:53:2:0:2:10:20%:7:2.3529E-1:33:7:6:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 0/0:57:4:2:2:11:36.36%:4:4.5113E-2:40:7:3:4:11 0/0:44:3:2:1:15:20%:9:1.1111E-1:36:11:7:4:16 0/0:33:1:0:1:17:5.88%:24:5E-1:37:16:11:5:19 0/0:26:1:0:1:20:5%:27:5E-1:37:19:13:6:20 0/0:60:1:0:1:15:6.67%:21:5E-1:36:14:6:8:15 0/0:49:2:1:1:14:14.29%:12:2.4074E-1:39:12:6:6:14 0/0:60:1:1:0:7:14.29%:8:5E-1:36:6:4:2:7 0/0:60:2:0:2:12:16.67%:10:2.381E-1:36:9:6:3:12 0/0:0:0:0:0:8:0%:14:1E0:34:8:6:2:10 0/0:29:1:0:1:9:11.11%:11:5E-1:34:8:6:2:9 0/0:44:3:2:1:15:20%:11:1.1207E-1:34:12:5:7:15 0/0:43:4:2:2:16:25%:8:5.0612E-2:35:12:5:7:17 0/0:35:1:1:0:9:11.11%:11:5E-1:37:8:6:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 0/0:60:2:1:1:12:16.67%:10:2.3913E-1:38:10:6:4:12 0/0:38:2:2:0:10:20%:7:2.3684E-1:35:8:2:6:10 0/0:48:2:1:1:9:22.22%:7:2.3529E-1:36:7:1:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:8 0/0:54:4:1:3:11:36.36%:4:4.5113E-2:36:7:6:1:12 0/1:34:8:4:4:18:44.44%:29:1.0995E-3:35:7:5:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:58:2:1:1:8:25%:5:2.3333E-1:34:6:2:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 0/0:0:0:0:0:14:0%:25:1E0:37:14:9:5:14 0/0:46:2:2:0:14:14.29%:13:2.4E-1:39:11:4:7:15 0/0:60:2:0:2:10:20%:7:2.3529E-1:39:7:2:5:10 0/0:34:1:1:0:12:8.33%:14:5E-1:38:10:3:7:14 0/0:59:3:2:1:12:25%:7:1.0714E-1:36:8:4:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:54:4:3:1:15:26.67%:8:4.9808E-2:36:11:4:7:15 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 0/0:60:1:0:1:14:7.14%:17:5E-1:37:13:6:7:14 0/0:60:2:1:1:12:16.67%:10:2.381E-1:36:9:4:5:12 MTB_anc 1213693 . G GCCGGTGGCGGCGGCGGGGCCGGCGGCATCGGCGGCGACGGCGGCC . PASS AC=13;AF=0.066;AN=196;ANN=GCCGGTGGCGGCGGCGGGGCCGGCGGCATCGGCGGCGACGGCGGCC|inframe_insertion|MODERATE|PE_PGRS21_Rv1087|gene1110|transcript|Transcript_gene1110|Coding|1/1|c.2136_2137insGGTGGCGGCGGCGGGGCCGGCGGCATCGGCGGCGACGGCGGCCCC|p.Ala712_Thr713insGlyGlyGlyGlyGlyAlaGlyGlyIleGlyGlyAspGlyGlyPro|2137/2304|2137/2304|713/767||INFO_REALIGN_3_PRIME,GCCGGTGGCGGCGGCGGGGCCGGCGGCATCGGCGGCGACGGCGGCC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1213693_1213694insCCGGTGGCGGCGGCGGGGCCGGCGGCATCGGCGGCGACGGCGGCC||||||,GCCGGTGGCGGCGGCGGGGCCGGCGGCATCGGCGGCGACGGCGGCC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1213693_1213694insCCGGTGGCGGCGGCGGGGCCGGCGGCATCGGCGGCGACGGCGGCC||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:54:8:5:3:19:42.11%:28:1.5455E-3:36:11:4:7:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. 0/0:34:2:1:1:15:13.33%:16:2.4138E-1:36:13:6:7:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:60:1:0:1:8:12.5%:8:5E-1:39:7:3:4:8 0/0:60:3:2:1:10:30%:4:1.0526E-1:40:7:1:6:10 0/0:44:3:1:2:9:33.33%:4:1.0294E-1:39:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:60:1:1:0:9:11.11%:11:5E-1:37:8:2:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:26:1:1:0:9:11.11%:11:5E-1:36:8:4:4:9 0/0:60:1:1:0:11:9.09%:14:5E-1:34:10:7:3:11 0/0:53:3:3:0:11:27.27%:7:1.0714E-1:36:8:5:3:11 0/0:50:5:3:2:11:45.45%:3:1.7544E-2:42:6:4:2:12 0/0:37:2:1:1:10:20%:7:2.3684E-1:38:8:6:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:43:4:2:2:13:30.77%:6:4.7826E-2:36:9:6:3:13 0/0:48:2:1:1:10:20%:7:2.3684E-1:35:8:5:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:5:1:4:10:45.45%:3:1.7544E-2:36:6:1:5:12 0/1:46:7:3:4:19:36.84%:23:3.9926E-3:36:12:4:8:19 0/0:49:2:2:0:12:16.67%:10:2.3913E-1:38:10:6:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:60:2:2:0:9:22.22%:5:2.3333E-1:34:6:3:3:9 0/0:37:1:0:1:9:11.11%:11:5E-1:35:8:5:3:10 0/0:60:3:2:1:12:25%:7:1.0714E-1:39:8:6:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:60:1:1:0:8:12.5%:8:5E-1:37:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:4:2:2:14:28.57%:6:4.7826E-2:36:9:2:7:14 0/0:54:4:2:2:13:30.77%:4:4.6584E-2:36:8:2:6:13 0/0:60:2:1:1:9:22.22%:7:2.3529E-1:36:7:3:4:10 0/0:51:5:4:1:18:27.78%:8:2.2239E-2:36:12:4:8:18 0/1:48:6:3:3:9:66.67%:24:3.4965E-3:45:2:2:0:9 0/1:58:6:2:4:16:37.5%:20:8.4291E-3:36:9:3:6:17 0/0:48:2:1:1:16:12.5%:15:2.4194E-1:35:14:9:5:16 0/0:47:4:1:3:16:25%:8:5.0612E-2:36:12:10:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:2:2:0:13:15.38%:10:2.381E-1:35:9:6:3:14 0/0:60:1:1:0:14:7.14%:17:5E-1:36:13:5:8:14 0/0:48:3:2:1:13:23.08%:9:1.1E-1:36:10:2:8:14 0/0:58:2:2:0:9:22.22%:7:2.3529E-1:36:7:4:3:9 ./. 0/0:45:3:2:1:15:20%:11:1.1207E-1:35:12:7:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:52:3:3:0:12:25%:7:1.0714E-1:37:8:3:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:60:2:2:0:11:18.18%:7:2.3684E-1:36:8:3:5:13 0/0:32:1:0:1:8:12.5%:8:5E-1:34:7:5:2:9 0/0:60:1:0:1:17:5.88%:24:5E-1:36:16:9:7:17 0/0:32:3:1:2:17:17.65%:9:1.1E-1:39:10:4:6:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:52:6:3:3:16:37.5%:20:8.4291E-3:38:9:3:6:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:52:3:1:2:12:25%:6:1.087E-1:40:9:3:6:12 0/0:55:5:4:1:12:41.67%:3:1.8634E-2:36:7:1:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:52:3:2:1:19:15.79%:14:1.1429E-1:34:15:7:8:20 0/0:60:1:1:0:8:12.5%:8:5E-1:40:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:45:5:5:0:15:33.33%:3:1.7544E-2:37:6:1:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:48:2:0:2:20:10%:21:2.4324E-1:37:17:5:12:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:45:5:3:2:13:38.46%:4:1.9565E-2:35:8:3:5:13 0/0:60:3:2:1:11:27.27%:4:1.0526E-1:34:7:4:3:12 0/0:33:1:0:1:9:11.11%:8:5E-1:33:7:4:3:10 0/0:49:1:1:0:13:7.69%:18:5E-1:34:12:6:6:14 0/0:51:3:1:2:14:21.43%:9:1.1111E-1:36:11:5:6:15 0/0:52:3:2:1:10:30%:4:1.0526E-1:35:7:4:3:10 0/0:48:2:2:0:11:18.18%:7:2.3684E-1:33:8:5:3:12 0/0:52:3:3:0:12:25%:7:1.0714E-1:36:8:4:4:12 0/0:52:3:2:1:12:25%:4:1.0526E-1:35:7:5:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:48:2:1:1:10:20%:5:2.3333E-1:35:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:47:6:4:2:14:42.86%:20:7.971E-3:39:8:3:5:14 0/1:48:6:0:6:8:75%:24:3.4965E-3:36:2:0:2:8 0/1:48:6:4:2:18:33.33%:20:9.2021E-3:34:11:6:5:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:56:6:2:4:11:54.55%:22:5.418E-3:36:4:2:2:11 0/0:60:1:0:1:8:12.5%:8:5E-1:34:7:5:2:9 0/0:51:3:1:2:10:30%:4:1.0526E-1:34:7:4:3:10 0/0:60:1:1:0:9:11.11%:11:5E-1:37:8:6:2:10 0/0:60:1:1:0:18:5.56%:24:5E-1:35:17:13:4:18 0/0:46:4:0:4:10:40%:3:4.3344E-2:36:6:4:2:13 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:38:7:4:3:9 0/0:41:4:3:1:27:14.81%:20:5.5222E-2:37:22:11:11:27 0/0:53:2:0:2:10:20%:7:2.3529E-1:33:7:6:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:53:7:6:1:18:38.89%:24:3.6151E-3:38:10:5:5:18 0/0:57:4:2:2:11:36.36%:4:4.5113E-2:40:7:3:4:11 0/0:44:3:2:1:15:20%:9:1.1111E-1:36:11:7:4:16 0/0:33:1:0:1:17:5.88%:24:5E-1:37:16:11:5:19 0/0:26:1:0:1:20:5%:27:5E-1:37:19:13:6:20 0/0:60:1:0:1:15:6.67%:21:5E-1:36:14:6:8:15 0/0:49:2:1:1:14:14.29%:12:2.4074E-1:39:12:6:6:14 0/0:60:1:1:0:7:14.29%:8:5E-1:36:6:4:2:7 0/0:60:2:0:2:12:16.67%:10:2.381E-1:36:9:6:3:12 0/0:0:0:0:0:8:0%:14:1E0:34:8:6:2:10 0/0:29:1:0:1:9:11.11%:11:5E-1:34:8:6:2:9 0/0:44:3:2:1:15:20%:11:1.1207E-1:34:12:5:7:15 0/0:43:4:2:2:16:25%:8:5.0612E-2:35:12:5:7:17 0/0:35:1:1:0:9:11.11%:11:5E-1:37:8:6:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:50:7:4:3:12:58.33%:26:2.2883E-3:35:5:1:4:12 0/0:60:2:1:1:12:16.67%:10:2.3913E-1:38:10:6:4:12 0/0:38:2:2:0:10:20%:7:2.3684E-1:35:8:2:6:10 0/0:48:2:1:1:9:22.22%:7:2.3529E-1:36:7:1:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:8 0/0:54:4:1:3:11:36.36%:4:4.5113E-2:36:7:6:1:12 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:58:2:1:1:8:25%:5:2.3333E-1:34:6:2:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 0/0:0:0:0:0:14:0%:25:1E0:37:14:9:5:14 0/0:46:2:2:0:14:14.29%:13:2.4E-1:39:11:4:7:15 0/0:60:2:0:2:10:20%:7:2.3529E-1:39:7:2:5:10 0/0:34:1:1:0:12:8.33%:14:5E-1:38:10:3:7:14 0/0:59:3:2:1:12:25%:7:1.0714E-1:36:8:4:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:54:4:3:1:15:26.67%:8:4.9808E-2:36:11:4:7:15 0/1:44:6:1:5:18:33.33%:20:8.837E-3:34:10:7:3:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:45:9:6:3:17:52.94%:33:4.6348E-4:36:8:3:5:17 0/0:60:1:0:1:14:7.14%:17:5E-1:37:13:6:7:14 0/0:60:2:1:1:12:16.67%:10:2.381E-1:36:9:4:5:12 MTB_anc 1217406 . G A . PASS AC=70;AF=0.236;AN=296;ANN=A|missense_variant|MODERATE|PE_PGRS22_Rv1091|gene1113|transcript|Transcript_gene1113|Coding|1/1|c.938G>A|p.Gly313Asp|938/2562|938/2562|313/853||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1217406G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1217406G>A||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:33:1:1:0:21:4.76%:31:5E-1:40:20:7:13:21 0/0:0:0:0:0:13:0%:25:1E0:41:13:8:5:13 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:39 0/0:0:0:0:0:8:0%:14:1E0:38:8:2:6:8 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:22 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:17 0/0:0:0:0:0:18:0%:32:1E0:37:18:13:5:18 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:24 1/1:41:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:20:0%:36:1E0:39:20:14:6:21 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:17 0/0:0:0:0:0:31:0%:59:1E0:37:31:19:12:32 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:18 0/0:0:0:0:0:11:0%:22:1E0:44:11:8:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:36:7:6:1:7 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:12 0/0:0:0:0:0:14:0%:25:1E0:40:14:6:8:15 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:20 0/0:0:0:0:0:11:0%:22:1E0:42:11:6:5:12 0/0:30:1:1:0:25:4%:38:5E-1:39:24:12:12:25 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:13:0%:25:1E0:39:13:6:7:15 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 0/0:0:0:0:0:23:0%:44:1E0:39:23:17:6:24 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:22 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:17 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:11 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:24 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:31 0/0:0:0:0:0:13:0%:25:1E0:41:13:8:5:13 0/0:0:0:0:0:24:0%:44:1E0:44:24:18:6:26 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:17 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:27 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:31 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:21 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:19 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:27 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:10:0%:17:1E0:43:10:2:8:10 1/1:38:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:35 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 0/0:0:0:0:0:11:0%:22:1E0:42:11:5:6:11 0/0:0:0:0:0:23:0%:44:1E0:37:23:16:7:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:21 0/0:0:0:0:0:14:0%:25:1E0:42:14:9:5:15 0/0:0:0:0:0:10:0%:17:1E0:46:10:6:4:10 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:17 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:16 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:23 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:20 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:34:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:7 0/0:0:0:0:0:13:0%:25:1E0:43:13:5:8:13 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:17 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:16 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:22 0/0:0:0:0:0:13:0%:25:1E0:38:13:8:5:16 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:22 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:20:0%:36:1E0:40:20:5:15:20 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:15 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:26 0/0:60:1:1:0:17:5.88%:24:5E-1:36:16:8:8:19 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:16 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:21 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:13 0/0:0:0:0:0:8:0%:14:1E0:41:8:4:4:8 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:22 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:20 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:29 0/0:0:0:0:0:12:0%:21:1E0:38:12:7:5:12 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:14 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:33 1/1:35:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:26 0/0:38:1:0:1:32:3.12%:48:5E-1:35:31:17:14:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 0/0:0:0:0:0:11:0%:22:1E0:37:11:6:5:11 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:28:0%:51:1E0:35:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:36:29:16:13:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:36:32:18:14:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:30:0%:55:1E0:36:30:18:12:30 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:16 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:26 0/0:0:0:0:0:13:0%:25:1E0:34:13:6:7:15 0/0:0:0:0:0:26:0%:47:1E0:35:26:12:14:27 0/0:0:0:0:0:23:0%:44:1E0:35:23:11:12:24 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:14 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:15 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:26 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:14 1/1:34:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:18 0/0:0:0:0:0:17:0%:33:1E0:34:17:7:10:20 0/0:0:0:0:0:7:0%:14:1E0:34:7:4:3:8 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:10 0/0:0:0:0:0:15:0%:29:1E0:36:15:11:4:17 0/0:0:0:0:0:12:0%:21:1E0:34:12:6:6:13 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:14 0/0:0:0:0:0:11:0%:22:1E0:34:11:5:6:12 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:17 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:18 0/0:0:0:0:0:18:0%:32:1E0:35:18:11:7:19 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:18 0/0:0:0:0:0:24:0%:44:1E0:35:24:15:9:24 0/0:0:0:0:0:11:0%:22:1E0:34:11:8:3:12 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:19 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:20 MTB_anc 1220570 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|MTS0858_RVnc0034-glyA1_Rv1093|gene1115-gene1116|intergenic_region|gene1115-gene1116|||n.1220570T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:65:20:45:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:36:22:14:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:17:11:29:96.55%:99:9.9776E-16:38:1:1:0:30 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:67:32:35:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:47:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:30:16:14:31:96.77%:99:6.8754E-17:39:1:1:0:32 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:70:31:39:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:16:12:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:53:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:63:31:32:63:100%:99:1.657E-37:0:0:0:0:66 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:49:31:18:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 1226103 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv1097c_Rv1097c|gene1120|transcript|Transcript_gene1120|Coding|1/1|c.42C>T|p.Tyr14Tyr|42/882|42/882|14/293||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1226103G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1226103G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:54 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:49:33:19:14:33 0/0:0:0:0:0:28:0%:51:1E0:49:28:18:10:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:52:0%:96:1E0:43:52:28:24:52 0/0:0:0:0:0:18:0%:32:1E0:49:18:8:10:18 0/0:0:0:0:0:65:0%:99:1E0:42:65:24:41:66 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:29 0/0:0:0:0:0:19:0%:37:1E0:45:19:5:14:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:29 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:19 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:47:28:9:19:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:33:0%:63:1E0:49:33:19:14:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:68:0%:99:1E0:44:68:34:34:68 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:45 0/0:0:0:0:0:18:0%:32:1E0:45:18:14:4:18 1/1:40:30:14:16:31:96.77%:99:6.8754E-17:39:1:0:1:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:23 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:43 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:30:0%:55:1E0:50:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:43 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:37:1:0:1:38:2.63%:58:5E-1:42:37:23:14:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:49:0%:93:1E0:43:49:31:18:49 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:47 0/0:0:0:0:0:37:0%:70:1E0:47:37:14:23:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:50:0%:92:1E0:46:50:15:35:51 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:42 0/0:0:0:0:0:21:0%:40:1E0:51:21:8:13:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:45 0/0:0:0:0:0:37:0%:70:1E0:50:37:18:19:37 0/0:0:0:0:0:24:0%:44:1E0:50:24:17:7:24 0/0:0:0:0:0:46:0%:85:1E0:49:46:32:14:46 0/0:0:0:0:0:30:0%:55:1E0:44:30:9:21:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:38:0%:70:1E0:47:37:22:15:38 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:11:26:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:40 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:33:0%:63:1E0:50:33:15:18:33 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:36 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:52:0%:96:1E0:42:52:23:29:54 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:14:0%:25:1E0:41:14:8:6:15 0/0:0:0:0:0:36:0%:66:1E0:42:36:9:27:36 0/0:0:0:0:0:45:0%:85:1E0:43:45:16:29:45 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:38 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:46 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:37:1:0:1:35:2.86%:55:5E-1:42:34:17:17:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:8:22:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:46:0%:85:1E0:41:46:20:26:46 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:46 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 0/0:0:0:0:0:60:0%:99:1E0:41:60:28:32:61 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:24 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:39 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:45 0/0:0:0:0:0:53:0%:99:1E0:42:53:33:20:53 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:30 0/0:0:0:0:0:52:0%:96:1E0:40:52:30:22:52 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:36 0/0:60:1:0:1:42:2.38%:66:5E-1:41:41:19:22:43 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 0/0:0:0:0:0:53:0%:99:1E0:39:53:24:29:54 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:56:0%:99:1E0:38:56:23:33:57 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:32 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:38 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:21 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:45 0/0:0:0:0:0:39:0%:74:1E0:39:39:12:27:41 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:52 0/0:0:0:0:0:56:0%:99:1E0:42:56:20:36:57 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:36 MTB_anc 1230778 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|mazF3_Rv1102c|gene1125|transcript|Transcript_gene1125|Coding|1/1|c.194T>C|p.Ile65Thr|194/312|194/312|65/103||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1230778A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.1230778A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:48:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:50:20:9:11:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:46:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:68:45:23:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:49:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:18:9:28:96.43%:99:3.7915E-15:39:1:1:0:28 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:26:14:12:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:35:14:21:36:97.22%:99:8.3613E-20:60:1:0:1:36 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:60:31:29:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:68:33:35:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 1235446 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|xseA_Rv1108c|gene1129|transcript|Transcript_gene1129|Coding|1/1|c.15G>A|p.Ser5Ser|15/1248|15/1248|5/415||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1235446C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1235446C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:51:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:53:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:63:31:32:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:49:32:17:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:63:39:24:63:100%:99:1.657E-37:0:0:0:0:63 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:64:28:36:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 1246362 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|bpoB_Rv1123c|gene1144|transcript|Transcript_gene1144|Coding|1/1|c.691G>A|p.Glu231Lys|691/909|691/909|231/302||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1246362C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.1246362C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:24:0%:44:1E0:49:24:18:6:24 0/0:0:0:0:0:54:0%:99:1E0:46:54:32:22:54 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:7:13:20 0/0:0:0:0:0:43:0%:82:1E0:49:43:23:20:43 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:24:0%:44:1E0:52:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:27:0%:52:1E0:53:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:24:15:40 0/0:0:0:0:0:13:0%:25:1E0:49:13:6:7:13 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:21 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:25 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:52:0%:96:1E0:46:52:29:23:52 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:30 0/0:0:0:0:0:15:0%:29:1E0:53:15:9:6:15 0/0:0:0:0:0:24:0%:44:1E0:52:24:11:13:26 0/0:0:0:0:0:15:0%:29:1E0:48:15:10:5:15 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:33 0/0:60:1:0:1:46:2.17%:73:5E-1:45:45:20:25:46 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:47 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:21:0%:40:1E0:45:21:15:6:21 0/0:0:0:0:0:27:0%:52:1E0:48:27:8:19:27 0/0:0:0:0:0:28:0%:51:1E0:51:28:13:15:28 0/0:39:1:0:1:41:2.44%:66:5E-1:45:40:16:24:41 0/0:0:0:0:0:54:0%:99:1E0:43:54:31:23:55 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:49:0%:93:1E0:45:49:21:28:49 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:42 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:46 0/0:0:0:0:0:47:0%:89:1E0:43:47:19:28:47 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:17:0%:33:1E0:49:17:5:12:17 0/0:0:0:0:0:51:0%:97:1E0:44:51:24:27:51 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:55:0%:99:1E0:43:55:21:34:56 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:49:0%:93:1E0:46:49:24:25:49 0/0:0:0:0:0:51:0%:97:1E0:43:51:28:23:52 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:53:31:20:11:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:46 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:51 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:19:8:28 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:41 0/1:50:22:9:13:26:84.62%:99:5.5261E-11:54:4:2:2:26 0/0:0:0:0:0:18:0%:32:1E0:51:18:9:9:18 0/0:0:0:0:0:33:0%:63:1E0:52:33:20:13:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:27 0/0:60:1:0:1:39:2.56%:62:5E-1:45:38:23:15:39 0/0:0:0:0:0:29:0%:55:1E0:50:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:49 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:34 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:60:1:1:0:21:4.76%:31:5E-1:44:20:10:10:21 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:33 0/0:0:0:0:0:22:0%:40:1E0:50:22:15:7:23 0/0:0:0:0:0:29:0%:55:1E0:51:29:9:20:29 0/0:0:0:0:0:18:0%:32:1E0:52:18:9:9:18 0/0:0:0:0:0:58:0%:99:1E0:41:58:29:29:58 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:50:0%:92:1E0:43:50:29:21:50 0/0:0:0:0:0:27:0%:52:1E0:43:27:7:20:27 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:21 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:39:1:1:0:30:3.33%:44:5E-1:46:29:13:16:30 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:65:0%:99:1E0:43:65:32:33:67 0/0:0:0:0:0:53:0%:99:1E0:41:53:33:20:53 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:66:0%:99:1E0:40:66:30:36:68 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:42 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:42 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:43 0/0:0:0:0:0:52:0%:96:1E0:40:52:27:25:55 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:33 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:46 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:62:0%:99:1E0:40:62:28:34:62 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:44 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:35:0%:67:1E0:46:35:24:11:35 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:45 0/0:0:0:0:0:54:0%:99:1E0:44:54:19:35:55 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 MTB_anc 1248382 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1125_Rv1125|gene1146|transcript|Transcript_gene1146|Coding|1/1|c.301G>A|p.Gly101Ser|301/1245|301/1245|101/414||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1248382G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1248382G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:15:7:8:16:93.75%:75:2.8282E-8:60:1:0:1:19 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:53:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:60:35:25:60:100%:99:1.035E-35:0:0:0:0:63 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:54:37:17:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 MTB_anc 1248936 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv1125_Rv1125|gene1146|transcript|Transcript_gene1146|Coding|1/1|c.855C>G|p.Pro285Pro|855/1245|855/1245|285/414||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1248936C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1248936C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:49:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:52:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:14:12:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:21:9:12:22:95.45%:99:1.0931E-11:32:1:1:0:24 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:14:17:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:49:19:7:12:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:26:10:16:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:20:11:9:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:61:30:31:61:100%:99:2.609E-36:0:0:0:0:62 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:41:21:20:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:40:67:41:26:68:98.53%:99:6.6743E-40:0:0:0:0:69 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:28:8:20:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:40:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 1250340 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|ppdK_Rv1127c|gene1148|transcript|Transcript_gene1148|Coding|1/1|c.1065C>T|p.Ala355Ala|1065/1473|1065/1473|355/490||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1250340G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1250340G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:55:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:51:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:50:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:17:11:6:18:94.44%:86:2.0936E-9:36:1:1:0:18 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:65:37:28:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:44:21:23:45:97.78%:99:4.4304E-25:39:1:1:0:46 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:21:12:9:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:44:25:19:45:97.78%:99:4.4304E-25:27:1:0:1:46 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:61:33:28:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:63:27:36:63:100%:99:1.657E-37:0:0:0:0:63 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:32:15:17:33:96.97%:99:4.7095E-18:39:1:0:1:37 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:49:28:21:49:100%:99:3.925E-29:0:0:0:0:53 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:36:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:29 MTB_anc 1250357 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|ppdK_Rv1127c|gene1148|transcript|Transcript_gene1148|Coding|1/1|c.1048C>A|p.Pro350Thr|1048/1473|1048/1473|350/490||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1250357G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1250357G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:53:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:48:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:45:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:14:16:31:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:61:31:30:61:100%:99:2.609E-36:0:0:0:0:62 1/1:42:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:38:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:30:12:18:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:36:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:37:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 MTB_anc 1253097 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1129c_Rv1129c|gene1150|transcript|Transcript_gene1150|Coding|1/1|c.1438T>C|p.Ser480Pro|1438/1461|1438/1461|480/486||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1253097A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1253097A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:27:14:13:28:96.43%:99:3.7915E-15:60:1:1:0:29 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:28:24:4:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:34:27:7:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:35:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:35:23:12:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 1254562 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|prpD_Rv1130|gene1151|transcript|Transcript_gene1151|Coding|1/1|c.8G>A|p.Gly3Asp|8/1581|8/1581|3/526||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1254562G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1254562G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:61:23:38:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:50:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:68:37:31:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:67:24:43:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:42:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:52 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 1254595 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|prpD_Rv1130|gene1151|transcript|Transcript_gene1151|Coding|1/1|c.41T>G|p.Phe14Cys|41/1581|41/1581|14/526||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1254595T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1254595T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:59:0%:99:1E0:44:59:25:34:59 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:26 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:23 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:30 0/0:0:0:0:0:37:0%:70:1E0:54:37:17:20:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:35 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:34 0/0:0:0:0:0:58:0%:99:1E0:42:58:27:31:59 0/0:0:0:0:0:29:0%:55:1E0:50:29:21:8:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:46 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:14:5:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:47 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:39 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:10:25:35 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:41 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:13:23:36 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:43 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:28 0/0:0:0:0:0:72:0%:99:1E0:46:72:36:36:74 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:40 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:41 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:33 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:19 0/0:0:0:0:0:34:0%:62:1E0:45:34:10:24:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:39 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:41 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:31 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:41:0%:78:1E0:49:41:21:20:41 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:24 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:65:0%:99:1E0:44:65:28:37:68 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:36 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:34 0/0:0:0:0:0:13:0%:25:1E0:48:13:11:2:13 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:37:0%:70:1E0:52:37:12:25:37 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:21 0/0:0:0:0:0:40:0%:74:1E0:47:40:17:23:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:34 0/0:0:0:0:0:36:0%:66:1E0:48:36:22:14:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:21 0/0:0:0:0:0:44:0%:81:1E0:47:44:21:23:44 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:18:0%:32:1E0:53:18:8:10:18 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:54 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:51 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:11:22:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 0/0:0:0:0:0:43:0%:82:1E0:45:43:16:27:43 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:32 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:41 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:27 0/0:0:0:0:0:55:0%:99:1E0:41:55:23:32:57 0/0:0:0:0:0:52:0%:96:1E0:43:52:24:28:53 0/1:46:10:6:4:27:37.04%:34:3.5253E-4:44:17:8:9:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:32 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:49 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:44 0/0:0:0:0:0:50:0%:92:1E0:39:50:28:22:51 0/0:0:0:0:0:52:0%:96:1E0:40:52:18:34:52 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:48 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:41 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:39:0%:74:1E0:38:39:17:22:40 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:28 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:33 0/0:0:0:0:0:54:0%:99:1E0:40:54:24:30:56 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:43 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:41 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 MTB_anc 1258076 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1132_Rv1132|gene1153|transcript|Transcript_gene1153|Coding|1/1|c.752A>G|p.His251Arg|752/1731|752/1731|251/576||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1258076A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1258076A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:67:32:35:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:33:12:21:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:42:29:17:12:30:96.67%:99:2.6212E-16:37:1:0:1:30 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:49:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:52:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:43:18:25:44:97.73%:99:1.7144E-24:39:1:1:0:44 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 1264381 . A AC . PASS AC=2;AF=6.667e-03;AN=300;ANN=AC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1264381_1264382insC||||||,AC|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1264381_1264382insC||||||,AC|intergenic_region|MODIFIER|PPE16_Rv1135c-Rv1138a_Rv1138a|gene1156-gene1157|intergenic_region|gene1156-gene1157|||n.1264381_1264382insC||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:43 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:52 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:20:10:30 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:40:0%:74:1E0:47:40:17:23:40 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:40 0/0:0:0:0:0:17:0%:33:1E0:55:17:10:7:17 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:13:0%:25:1E0:48:13:8:5:13 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:21 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:27:0%:52:1E0:50:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:22 0/0:0:0:0:0:42:0%:77:1E0:48:42:21:21:42 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:28 0/0:0:0:0:0:37:0%:70:1E0:49:37:19:18:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:33 0/0:36:1:0:1:33:3.03%:52:5E-1:46:32:10:22:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:52:0%:96:1E0:49:52:25:27:53 0/0:0:0:0:0:43:0%:82:1E0:48:43:20:23:43 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:17 0/0:0:0:0:0:42:0%:77:1E0:46:42:27:15:42 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:43 0/0:60:1:0:1:27:3.7%:41:5E-1:49:26:15:11:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:41 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:43:0%:82:1E0:49:43:18:25:45 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:49 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:49 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:33 0/0:0:0:0:0:58:0%:99:1E0:45:58:28:30:59 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:42:0%:77:1E0:47:42:24:18:42 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:34 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:35 0/0:0:0:0:0:25:0%:48:1E0:47:25:18:7:25 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:12:23:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:19 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 0/0:0:0:0:0:13:0%:25:1E0:47:13:5:8:13 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:37:0%:70:1E0:48:37:23:14:37 0/0:0:0:0:0:46:0%:85:1E0:38:46:16:30:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:46:39:12:27:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:21:0%:40:1E0:45:21:5:16:21 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:40 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:19 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:28 0/0:0:0:0:0:47:0%:89:1E0:40:47:29:18:48 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:61:0%:99:1E0:43:61:32:29:64 0/0:0:0:0:0:51:0%:92:1E0:39:50:23:27:52 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:35 0/0:0:0:0:0:20:0%:36:1E0:39:20:15:5:22 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:35 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:49 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:46 0/0:0:0:0:0:49:0%:93:1E0:38:49:27:22:50 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:22:9:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:20:11:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:44 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 0/0:0:0:0:0:58:0%:99:1E0:40:58:32:26:61 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:48 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:53 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:31 0/0:32:1:0:1:25:4%:38:5E-1:45:24:13:11:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:7:18:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:50 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:38 MTB_anc 1266777 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv1139c_Rv1139c|gene1159|transcript|Transcript_gene1159|Coding|1/1|c.209G>A|p.Gly70Asp|209/501|209/501|70/166||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1266777C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1266777C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:52 0/0:0:0:0:0:17:0%:33:1E0:46:17:5:12:18 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:44 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:30 0/0:0:0:0:0:17:0%:33:1E0:41:17:9:8:17 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:37 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:34 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:48 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:42:0%:77:1E0:44:42:27:15:42 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:30 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:24 0/0:0:0:0:0:60:0%:99:1E0:41:60:36:24:61 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:48:39:22:17:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:8:19:28 0/0:39:1:0:1:36:2.78%:55:5E-1:44:35:15:20:37 0/0:0:0:0:0:41:0%:78:1E0:51:41:17:24:41 0/0:0:0:0:0:28:0%:51:1E0:42:28:20:8:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:13:25:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:60:0%:99:1E0:46:60:29:31:60 0/0:38:1:0:1:43:2.33%:70:5E-1:46:42:26:16:43 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:22:0%:40:1E0:41:22:8:14:23 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:12:21:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:47 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:38 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:27:16:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:22 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:58:0%:99:1E0:46:58:27:31:59 0/0:0:0:0:0:36:0%:66:1E0:47:36:25:11:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:60:1:1:0:45:2.22%:73:5E-1:48:44:28:16:45 0/0:0:0:0:0:59:0%:99:1E0:45:59:28:31:59 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:37 0/0:0:0:0:0:15:0%:29:1E0:43:15:4:11:16 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:22 0/0:0:0:0:0:49:0%:93:1E0:45:49:29:20:49 0/0:0:0:0:0:32:0%:59:1E0:50:32:18:14:32 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:37 0/0:0:0:0:0:47:0%:89:1E0:43:47:17:30:49 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:5:18:23 0/0:0:0:0:0:47:0%:89:1E0:48:47:26:21:48 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:44 0/0:39:1:0:1:39:2.56%:62:5E-1:44:38:11:27:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:32 0/0:0:0:0:0:23:0%:44:1E0:48:23:8:15:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:21:9:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:31:0%:59:1E0:51:31:16:15:31 0/0:0:0:0:0:54:0%:99:1E0:41:54:25:29:55 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:21:10:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:60:1:0:1:34:2.94%:51:5E-1:43:33:20:13:34 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:17:6:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:27 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:51 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:27 0/0:0:0:0:0:58:0%:99:1E0:43:58:27:31:59 0/0:0:0:0:0:47:0%:89:1E0:43:47:18:29:48 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:39 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:44 0/0:0:0:0:0:31:0%:59:1E0:36:31:18:13:34 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:38 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:35 0/0:0:0:0:0:39:0%:74:1E0:36:39:22:17:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 0/0:0:0:0:0:47:0%:89:1E0:39:47:22:25:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:9:23:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:50:0%:92:1E0:39:50:28:22:53 0/0:0:0:0:0:53:0%:99:1E0:42:53:22:31:53 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:42 0/0:0:0:0:0:56:0%:99:1E0:40:56:18:38:56 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:36 0/0:0:0:0:0:47:0%:89:1E0:41:47:19:28:49 0/0:31:1:0:1:49:2.04%:80:5E-1:43:48:23:25:50 MTB_anc 1271791 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|synonymous_variant|LOW|Rv1144_Rv1144|gene1164|transcript|Transcript_gene1164|Coding|1/1|c.636C>G|p.Pro212Pro|636/753|636/753|212/250||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1271791C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1271791C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:39 0/0:0:0:0:0:28:0%:51:1E0:52:28:18:10:28 0/0:0:0:0:0:53:0%:99:1E0:46:53:34:19:53 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:28 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:47:35:25:10:35 0/0:37:1:0:1:38:2.63%:58:5E-1:47:37:19:18:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:18:29:47 0/0:0:0:0:0:16:0%:29:1E0:54:16:8:8:16 0/0:0:0:0:0:56:0%:99:1E0:40:56:24:32:56 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:25 0/0:0:0:0:0:33:0%:63:1E0:49:33:12:21:33 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:55:0%:99:1E0:46:55:27:28:55 0/0:0:0:0:0:34:0%:62:1E0:46:34:23:11:34 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:38:1:1:0:34:2.94%:51:5E-1:43:33:18:15:34 0/0:0:0:0:0:39:0%:74:1E0:50:39:21:18:39 0/0:0:0:0:0:39:0%:74:1E0:40:39:14:25:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:62:0%:99:1E0:47:62:22:40:62 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:43 0/0:0:0:0:0:55:0%:99:1E0:45:55:32:23:55 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:50:0%:92:1E0:46:50:22:28:50 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:29:0%:55:1E0:50:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:39:1:1:0:43:2.33%:70:5E-1:43:42:17:25:43 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:48 0/0:0:0:0:0:42:0%:77:1E0:48:42:20:22:44 0/0:0:0:0:0:16:0%:29:1E0:48:16:12:4:16 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:39:1:1:0:48:2.08%:76:5E-1:45:47:27:20:48 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:24 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:48 0/0:0:0:0:0:36:0%:66:1E0:51:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 0/0:0:0:0:0:47:0%:89:1E0:47:47:27:20:47 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:16 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:27:0%:52:1E0:50:27:11:16:27 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:19 0/0:0:0:0:0:38:0%:70:1E0:51:38:16:22:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:24:9:33 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:39:1:0:1:31:3.23%:48:5E-1:45:30:16:14:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:33:1:1:0:41:2.44%:66:5E-1:46:40:26:14:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:52:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:25:0%:48:1E0:51:25:12:13:25 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:8:25:34 0/0:0:0:0:0:52:0%:96:1E0:44:52:27:25:52 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:21 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 1/1:44:48:29:19:49:97.96%:99:1.9625E-27:37:1:0:1:51 0/0:37:1:0:1:26:3.85%:38:5E-1:40:25:7:18:26 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:37:34:12:22:34 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:51:0%:97:1E0:39:51:24:27:52 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:45 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:38 0/0:0:0:0:0:60:0%:99:1E0:44:60:31:29:60 0/0:0:0:0:0:56:0%:99:1E0:42:56:23:33:56 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:27 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:52:0%:96:1E0:41:52:21:31:54 0/0:0:0:0:0:39:0%:74:1E0:36:39:17:22:41 0/0:0:0:0:0:46:0%:85:1E0:40:46:18:28:46 0/0:0:0:0:0:51:0%:97:1E0:41:51:23:28:51 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:42 0/0:0:0:0:0:53:0%:99:1E0:39:53:25:28:54 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:41 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:36 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:67:0%:99:1E0:38:67:35:32:69 0/0:37:1:0:1:44:2.27%:69:5E-1:45:43:17:26:44 0/0:49:2:0:2:34:5.88%:43:2.4627E-1:41:32:14:18:34 0/0:0:0:0:0:59:0%:99:1E0:43:59:25:34:59 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:9:20:29 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:36 0/0:0:0:0:0:53:0%:99:1E0:44:53:26:27:53 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 MTB_anc 1276432 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv1148c_Rv1148c|gene1168|transcript|Transcript_gene1168|Coding|1/1|c.1317G>A|p.Lys439Lys|1317/1449|1317/1449|439/482||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1276432C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1276432C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:42 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 0/0:0:0:0:0:54:0%:99:1E0:45:54:25:29:54 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:43:0%:82:1E0:51:43:23:20:43 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:40:0%:74:1E0:47:40:17:23:40 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:47:38:14:24:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:34 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:35:0%:67:1E0:47:35:10:25:35 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:23 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:18 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:60:1:0:1:30:3.33%:44:5E-1:50:29:12:17:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:24:0%:44:1E0:50:24:9:15:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:10:28:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:60:1:0:1:23:4.35%:34:5E-1:45:22:12:10:23 0/0:0:0:0:0:10:0%:17:1E0:48:10:6:4:10 0/0:33:1:0:1:15:6.67%:21:5E-1:45:14:5:9:15 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:42:0%:77:1E0:50:42:23:19:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:68:0%:99:1E0:46:68:31:37:68 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:32 0/0:49:2:1:1:37:5.41%:50:2.4658E-1:42:35:13:22:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:15:27:42 0/0:38:1:0:1:23:4.35%:34:5E-1:48:22:8:14:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:34 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:34:1:0:1:40:2.5%:62:5E-1:43:39:25:14:41 0/0:0:0:0:0:39:0%:74:1E0:48:39:13:26:40 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:21 0/0:60:1:0:1:37:2.7%:59:5E-1:46:36:18:18:38 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:36:1:0:1:26:3.85%:38:5E-1:45:25:14:11:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:18:0%:32:1E0:44:18:6:12:19 0/0:60:1:0:1:34:2.94%:51:5E-1:41:33:14:19:34 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:28 0/0:38:1:0:1:27:3.7%:41:5E-1:42:26:12:14:28 0/0:0:0:0:0:47:0%:89:1E0:45:47:18:29:48 0/0:0:0:0:0:20:0%:36:1E0:43:20:6:14:20 0/0:0:0:0:0:32:0%:59:1E0:47:32:11:21:32 0/0:0:0:0:0:56:0%:99:1E0:46:56:29:27:58 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:39 0/0:0:0:0:0:9:0%:18:1E0:46:9:4:5:9 0/0:36:1:0:1:29:3.45%:45:5E-1:44:28:13:15:30 0/0:0:0:0:0:35:0%:67:1E0:50:35:14:21:35 0/0:0:0:0:0:23:0%:44:1E0:49:23:9:14:23 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:10:24:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:49:33:23:10:35 0/0:38:1:1:0:31:3.23%:48:5E-1:48:30:12:18:31 0/0:0:0:0:0:19:0%:37:1E0:45:19:6:13:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:27 0/0:38:1:1:0:21:4.76%:31:5E-1:43:20:9:11:21 0/0:0:0:0:0:24:0%:44:1E0:52:24:8:16:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:20:0%:36:1E0:52:20:10:10:20 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:41 0/0:0:0:0:0:30:0%:55:1E0:43:30:21:9:32 0/0:0:0:0:0:45:0%:85:1E0:43:45:14:31:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:31 0/0:0:0:0:0:17:0%:33:1E0:45:17:4:13:17 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:37 0/0:0:0:0:0:24:0%:44:1E0:39:24:9:15:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:37 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:32:0%:59:1E0:46:32:22:10:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 0/0:60:1:0:1:46:2.17%:73:5E-1:44:45:19:26:46 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:32 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:30 0/0:32:1:0:1:33:3.03%:52:5E-1:45:32:15:17:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 0/0:0:0:0:0:47:0%:89:1E0:41:47:28:19:47 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:22 0/0:0:0:0:0:38:0%:70:1E0:39:38:25:13:41 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:40 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:33 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:29 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:37:1:0:1:53:1.89%:88:5E-1:40:52:27:25:53 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:46 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:24 0/0:37:1:0:1:37:2.7%:59:5E-1:45:36:19:17:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:37 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:48 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:44 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:9:21:31 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:39 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:48 MTB_anc 1276588 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|synonymous_variant|LOW|Rv1148c_Rv1148c|gene1168|transcript|Transcript_gene1168|Coding|1/1|c.1161G>C|p.Ala387Ala|1161/1449|1161/1449|387/482||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1276588C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1276588C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:51 0/0:0:0:0:0:14:0%:25:1E0:48:14:5:9:14 0/0:0:0:0:0:51:0%:97:1E0:47:51:23:28:52 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:49:2:1:1:21:9.52%:25:2.439E-1:47:19:11:8:21 0/0:39:1:1:0:35:2.86%:55:5E-1:42:34:15:19:35 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:33 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:45 0/0:60:1:0:1:15:6.67%:21:5E-1:50:14:9:5:15 0/0:0:0:0:0:35:0%:67:1E0:40:35:11:24:35 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:24 0/0:0:0:0:0:13:0%:25:1E0:42:13:7:6:13 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:24 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:28:0%:51:1E0:49:28:11:17:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:22:0%:40:1E0:45:22:7:15:23 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:24 0/0:0:0:0:0:11:0%:22:1E0:45:11:4:7:11 0/0:37:1:0:1:24:4.17%:34:5E-1:42:23:7:16:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:40:0%:74:1E0:49:40:19:21:40 0/0:60:1:1:0:14:7.14%:17:5E-1:37:13:9:4:14 0/0:0:0:0:0:39:0%:74:1E0:53:39:23:16:39 0/0:49:2:2:0:30:6.67%:37:2.4576E-1:48:28:16:12:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:68:0%:99:1E0:46:68:35:33:68 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:40 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 0/0:39:1:1:0:25:4%:38:5E-1:46:24:16:8:25 0/0:60:1:1:0:36:2.78%:55:5E-1:40:35:16:19:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:38:1:0:1:43:2.33%:70:5E-1:42:42:16:26:43 0/0:0:0:0:0:39:0%:74:1E0:47:39:16:23:39 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:27 0/0:60:1:0:1:31:3.23%:48:5E-1:46:30:17:13:31 0/0:33:2:0:2:22:9.09%:24:2.4419E-1:45:20:8:12:22 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:48 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:38:0%:70:1E0:50:38:20:18:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:24:0%:44:1E0:54:24:10:14:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:10:28:39 0/0:0:0:0:0:60:0%:99:1E0:45:60:27:33:60 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:35 0/0:0:0:0:0:10:0%:17:1E0:50:10:3:7:10 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:39:1:0:1:34:2.94%:51:5E-1:44:33:11:22:35 0/0:0:0:0:0:23:0%:44:1E0:52:23:8:15:23 0/0:0:0:0:0:20:0%:36:1E0:45:20:14:6:20 0/0:0:0:0:0:32:0%:59:1E0:46:32:22:10:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:36:2:2:0:24:8.33%:27:2.4468E-1:44:22:8:14:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:27 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:33:0%:63:1E0:50:33:15:18:33 0/0:0:0:0:0:19:0%:37:1E0:53:19:14:5:19 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 0/0:0:0:0:0:48:0%:89:1E0:42:48:19:29:48 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:33:1:1:0:23:4.35%:34:5E-1:43:22:9:13:23 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:34 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:19 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:9:25:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:19:0%:37:1E0:43:19:4:15:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:38 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:47 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:52:0%:96:1E0:42:52:25:27:53 0/0:0:0:0:0:45:0%:85:1E0:44:45:28:17:45 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:42:0%:77:1E0:41:42:27:15:44 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:38:0%:70:1E0:38:38:20:18:41 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:43 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:21:11:32 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:32:1:0:1:47:2.13%:77:5E-1:40:46:19:27:50 0/0:38:1:0:1:36:2.78%:55:5E-1:48:35:17:18:36 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:39:1:1:0:29:3.45%:45:5E-1:42:28:15:13:29 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:42 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:60:1:0:1:42:2.38%:66:5E-1:45:41:22:19:42 0/0:47:5:3:2:37:13.51%:32:2.706E-2:42:32:17:15:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:36 0/0:0:0:0:0:57:0%:99:1E0:42:57:28:29:57 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 MTB_anc 1276683 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv1148c_Rv1148c|gene1168|transcript|Transcript_gene1168|Coding|1/1|c.1066A>C|p.Asn356His|1066/1449|1066/1449|356/482||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1276683T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1276683T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:30:19:49 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:23:11:34 0/0:0:0:0:0:14:0%:25:1E0:42:14:6:8:14 0/0:0:0:0:0:34:0%:62:1E0:49:34:20:14:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:40:0%:74:1E0:50:40:19:21:42 0/0:0:0:0:0:52:0%:96:1E0:43:52:21:31:52 0/0:0:0:0:0:20:0%:36:1E0:45:20:14:6:20 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:52 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:37:1:1:0:27:3.7%:41:5E-1:40:26:12:14:27 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:42 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:60:1:0:1:27:3.7%:41:5E-1:43:26:12:14:27 0/0:38:1:1:0:27:3.7%:41:5E-1:44:26:15:11:27 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:29 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:17 0/0:60:1:0:1:27:3.7%:41:5E-1:45:26:10:16:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:19 0/0:38:1:0:1:46:2.17%:73:5E-1:48:45:26:19:46 0/0:0:0:0:0:36:0%:66:1E0:46:36:23:13:36 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:73:0%:99:1E0:46:73:43:30:73 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:43:0%:82:1E0:51:43:20:23:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:33 0/0:60:2:2:0:29:6.9%:37:2.4561E-1:45:27:17:10:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:43 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:49 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:42:0%:77:1E0:44:42:27:15:42 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:35:1:0:1:42:2.38%:66:5E-1:41:41:22:19:42 0/0:0:0:0:0:48:0%:89:1E0:46:48:28:20:48 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:29 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:51 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:64:0%:99:1E0:46:64:34:30:65 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:11:0%:22:1E0:45:11:6:5:11 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:30 0/0:0:0:0:0:34:0%:62:1E0:50:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:45:0%:85:1E0:49:45:29:16:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:60:1:0:1:31:3.23%:48:5E-1:38:30:15:15:31 0/0:0:0:0:0:40:0%:74:1E0:49:40:15:25:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:21:9:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:9:0%:18:1E0:41:9:5:4:9 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:50:25:18:7:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:50:31:20:11:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:30:17:48 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:52:0%:96:1E0:44:52:23:29:53 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:41 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:24 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:7:17:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:31 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:44:0%:81:1E0:39:44:17:27:45 0/0:0:0:0:0:51:0%:97:1E0:41:51:31:20:51 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:21:8:31 0/0:0:0:0:0:60:0%:99:1E0:42:60:28:32:60 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:47 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:50:0%:92:1E0:41:50:32:18:50 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:39 0/0:0:0:0:0:53:0%:99:1E0:43:53:31:22:54 0/0:0:0:0:0:44:0%:81:1E0:37:44:27:17:44 0/0:0:0:0:0:47:0%:89:1E0:42:47:34:13:50 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:58:0%:99:1E0:39:58:30:28:59 0/0:0:0:0:0:54:0%:99:1E0:44:54:27:27:54 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:40 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:63:0%:99:1E0:44:63:36:27:63 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:45 MTB_anc 1276684 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|Rv1148c_Rv1148c|gene1168|transcript|Transcript_gene1168|Coding|1/1|c.1065C>G|p.Ala355Ala|1065/1449|1065/1449|355/482||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1276684G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1276684G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:43:49:30:19:49 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:32:0%:59:1E0:45:32:10:22:33 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:48:34:23:11:34 0/0:0:0:0:0:12:0%:21:1E0:44:12:5:7:12 0/0:0:0:0:0:36:0%:66:1E0:49:36:21:15:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:48:42:20:22:42 0/0:0:0:0:0:51:0%:97:1E0:43:51:20:31:53 0/0:0:0:0:0:20:0%:36:1E0:45:20:14:6:20 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:52 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:20:10:31 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:38:1:1:0:26:3.85%:38:5E-1:41:25:11:14:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:0:0:0:0:25:0%:48:1E0:50:25:11:14:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:60:1:0:1:27:3.7%:41:5E-1:43:26:13:13:28 0/0:39:1:1:0:27:3.7%:41:5E-1:45:26:15:11:27 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:29 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:17 0/0:60:1:0:1:28:3.57%:41:5E-1:43:27:11:16:28 0/0:60:1:0:1:32:3.12%:48:5E-1:45:31:14:17:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:19:0%:37:1E0:41:19:13:6:19 0/0:0:0:0:0:46:0%:85:1E0:47:46:26:20:46 0/0:0:0:0:0:35:0%:67:1E0:47:35:22:13:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:73:0%:99:1E0:46:73:43:30:73 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:43:0%:82:1E0:51:43:20:23:43 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:25 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:60:2:2:0:29:6.9%:37:2.4561E-1:45:27:17:10:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:39 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:43 0/0:0:0:0:0:41:0%:78:1E0:46:41:18:23:41 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:25 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:41:0%:78:1E0:44:41:26:15:41 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:29:1:0:1:42:2.38%:66:5E-1:41:41:22:19:42 0/0:0:0:0:0:47:0%:89:1E0:46:47:27:20:47 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:29 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:50 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:43 0/0:0:0:0:0:65:0%:99:1E0:45:65:34:31:65 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:11:0%:22:1E0:43:11:6:5:11 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:34:0%:62:1E0:50:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:45:0%:85:1E0:49:45:29:16:45 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:29:0%:51:1E0:38:28:13:15:31 0/0:0:0:0:0:40:0%:74:1E0:49:40:15:25:40 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:9:0%:18:1E0:42:9:5:4:9 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:25:0%:48:1E0:50:25:18:7:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:51:30:19:11:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:30:17:48 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:53:0%:99:1E0:44:53:24:29:53 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:40 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:24 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:7:17:24 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:36 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:31 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:45 0/0:0:0:0:0:50:0%:92:1E0:41:50:31:19:52 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:38 0/0:0:0:0:0:31:0%:59:1E0:41:31:21:10:31 0/0:0:0:0:0:58:0%:99:1E0:42:58:28:30:59 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:47 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:49:0%:93:1E0:41:49:32:17:50 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:39 0/0:0:0:0:0:54:0%:99:1E0:42:54:32:22:55 0/0:0:0:0:0:41:0%:78:1E0:37:41:24:17:44 0/0:0:0:0:0:49:0%:93:1E0:42:49:35:14:51 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:60:0%:99:1E0:38:60:30:30:60 0/0:0:0:0:0:54:0%:99:1E0:44:54:27:27:54 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:45 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:61:0%:99:1E0:45:61:35:26:63 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:46 MTB_anc 1277869 . G GT . PASS AC=299;AF=0.997;AN=300;ANN=GT|intergenic_region|MODIFIER|Rv1148c_Rv1148c-Rv1149_Rv1149|gene1168-gene1169|intergenic_region|gene1168-gene1169|||n.1277869_1277870insT||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:11:6:5:12:91.67%:53:4.8074E-6:34:1:1:0:12 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:19:12:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:18:16:33:97.14%:99:3.2089E-19:32:1:1:0:35 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:32:20:12:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:26:15:11:27:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:52:27:14:13:29:93.1%:99:1.5465E-14:46:2:2:0:29 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:19:7:12:20:95%:98:1.5234E-10:32:1:0:1:20 1/1:45:24:12:12:24:96%:99:2.0568E-13:37:1:1:0:25 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:26:14:12:28:92.86%:99:5.6872E-14:30:2:1:1:28 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:44:24:20:44:97.78%:99:4.4304E-25:35:1:1:0:45 1/1:49:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:36:17:19:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:22:9:13:24:91.67%:99:1.0078E-11:35:2:2:0:24 1/1:44:26:14:12:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:14:11:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:35:21:14:35:94.59%:99:4.2437E-19:31:2:0:2:37 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:41:21:20:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:55:28:27:55:96.49%:99:1.1048E-30:34:2:0:2:57 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:49:19:30:51:96.08%:99:3.4484E-27:34:2:0:2:51 1/1:45:30:13:17:31:96.77%:99:6.8754E-17:33:1:1:0:31 1/1:44:49:28:21:50:96.08%:99:3.4484E-27:35:2:1:1:51 1/1:44:24:8:16:25:96%:99:2.0568E-13:34:1:1:0:25 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:20:11:9:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:8:23:31:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:44:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:40:19:21:38:100%:99:9.3017E-24:0:0:0:0:40 0/1:49:15:7:8:17:88.24%:71:7.3277E-8:46:2:0:2:17 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:19:9:10:20:95%:98:1.5234E-10:34:1:1:0:20 1/1:46:26:10:16:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:41:23:8:15:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:19:22:41:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:46:34:13:21:35:97.14%:99:3.2089E-19:31:1:0:1:35 1/1:44:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:53:38:16:22:41:92.68%:99:3.1178E-20:43:3:3:0:41 1/1:49:26:15:11:27:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:35:19:16:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:28:14:14:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:49:15:8:7:16:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:42:20:8:12:20:95.24%:99:4.0873E-11:33:1:1:0:21 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:46:28:18:46:97.87%:99:2.9526E-26:33:1:0:1:47 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:12:11:24:95.83%:99:7.7525E-13:35:1:0:1:24 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:17:13:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:18:19:38:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:46:24:11:13:23:100%:99:3.101E-14:0:0:0:0:24 1/1:50:25:10:15:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:40:25:13:12:25:96.15%:99:5.4444E-14:32:1:0:1:26 1/1:44:21:16:5:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:38:16:5:11:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:19:10:9:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:48:40:21:19:40:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:44:18:26:45:97.78%:99:4.4304E-25:34:1:0:1:45 1/1:46:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:30:17:13:31:96.77%:99:6.8754E-17:34:1:1:0:31 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:15:22:37:94.87%:99:3.0128E-20:32:2:2:0:39 1/1:45:33:14:19:33:97.06%:99:1.2301E-18:35:1:1:0:34 1/1:45:22:10:12:23:95.65%:99:2.9149E-12:34:1:1:0:23 1/1:43:33:17:16:34:94.29%:99:1.2301E-18:39:1:1:0:34 1/1:44:37:14:23:39:94.87%:99:3.0128E-20:33:2:1:1:39 1/1:43:28:16:12:29:96.55%:99:9.9776E-16:32:1:0:1:29 1/1:41:26:13:13:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:19:12:7:17:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:20:15:5:22:90.91%:99:4.0873E-11:34:1:1:0:22 1/1:47:23:13:10:24:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:43:31:19:12:31:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:34:15:19:35:97.14%:99:3.2089E-19:34:1:1:0:35 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:12:15:29:93.1%:99:1.5465E-14:36:2:1:1:29 1/1:46:31:13:18:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:40:33:16:17:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:24:12:36:97.3%:99:2.1762E-20:33:1:1:0:37 1/1:42:38:19:19:40:95%:99:8.0088E-21:33:2:2:0:40 1/1:46:31:18:13:32:96.88%:99:1.8007E-17:33:1:1:0:32 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:53:24:29:56:92.98%:99:3.3697E-28:40:4:1:3:57 1/1:42:33:13:20:34:94.29%:99:5.9366E-18:33:2:0:2:35 1/1:45:18:10:8:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:24:14:10:22:92.31%:99:2.0568E-13:32:1:0:1:26 1/1:39:48:23:25:47:100%:99:1.554E-28:0:0:0:0:48 1/1:44:42:20:22:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:48:32:16:47:100%:99:1.554E-28:0:0:0:0:48 1/1:40:47:16:31:46:97.92%:99:7.6145E-27:32:1:0:1:48 1/1:40:52:22:30:49:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:43:20:23:43:97.73%:99:1.7144E-24:32:1:0:1:44 1/1:44:51:23:28:52:98.08%:99:3.3479E-29:33:1:0:1:52 1/1:41:37:19:18:38:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:41:48:20:28:49:96%:99:1.3143E-26:32:2:1:1:50 1/1:39:40:20:20:38:97.56%:99:9.8874E-23:37:1:1:0:41 1/1:43:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:32:22:10:32:96.97%:99:4.7095E-18:33:1:0:1:33 1/1:42:28:14:14:30:93.33%:99:4.194E-15:34:2:2:0:30 1/1:38:50:26:24:50:98.04%:99:1.3013E-28:33:1:0:1:51 1/1:39:36:20:16:35:92.31%:99:4.2179E-19:33:3:0:3:39 1/1:42:37:19:18:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:29:15:14:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:43:21:22:40:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:42:21:21:43:97.67%:99:6.6289E-24:32:1:0:1:43 1/1:42:38:23:15:39:97.44%:99:1.4697E-21:36:1:0:1:39 1/1:41:27:19:8:27:96.43%:99:3.7915E-15:37:1:1:0:28 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:40:23:17:41:97.56%:99:9.8874E-23:37:1:1:0:41 1/1:43:52:19:33:54:96.3%:99:6.1952E-29:48:2:2:0:54 1/1:45:47:19:28:46:100%:99:6.1512E-28:0:0:0:0:47 MTB_anc 1278199 . G A . PASS AC=23;AF=0.676;AN=34;ANN=A|missense_variant|MODERATE|Rv1149_Rv1149|gene1169|transcript|Transcript_gene1169|Coding|1/1|c.307G>A|p.Val103Met|307/408|307/408|103/135||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1278199G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1278199G>A||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:7:0%:14:1E0:38:7:0:7:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:38:13:0:13:13 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:37:6:1:5:7:85.71%:26:2.331E-3:37:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:37:8:1:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:8:0%:14:1E0:38:8:0:8:8 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:9:0%:18:1E0:38:9:1:8:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 MTB_anc 1278278 . A G . PASS AC=4;AF=1.00;AN=4;ANN=G|missense_variant|MODERATE|Rv1149_Rv1149|gene1169|transcript|Transcript_gene1169|Coding|1/1|c.386A>G|p.Glu129Gly|386/408|386/408|129/135||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1278278A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1278278A>G||||||,G|intragenic_variant|MODIFIER|Rv1150_Rv1150|gene1170|gene_variant|gene1170|||n.1278278A>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 1281771 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1155_Rv1155|gene1175|transcript|Transcript_gene1175|Coding|1/1|c.343C>T|p.Pro115Ser|343/444|343/444|115/147||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1281771C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1281771C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:46:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:61:23:38:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:53:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:23:15:8:24:95.83%:99:7.7525E-13:60:1:1:0:25 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:48:33:15:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:44:26:18:45:97.78%:99:4.4304E-25:37:1:1:0:45 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:49:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:45:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:35:17:18:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:42:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 1287112 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|mutT2_Rv1160-narG_Rv1161|gene1183-gene1184|intergenic_region|gene1183-gene1184|||n.1287112C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:54:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:49:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:53:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:51:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:19:20:40:97.5%:99:3.8137E-22:60:1:1:0:40 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:69:31:38:69:100%:99:4.233E-41:0:0:0:0:69 1/1:44:63:29:34:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 1292464 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|narH_Rv1162|gene1185|transcript|Transcript_gene1185|Coding|1/1|c.1400C>T|p.Ala467Val|1400/1677|1400/1677|467/558||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1292464C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1292464C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:46:20:26:47:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:27:13:14:28:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:48:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:24:8:16:25:100%:99:3.101E-14:0:0:0:0:25 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:42:23:19:43:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:33:13:20:34:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:69:33:36:69:100%:99:4.233E-41:0:0:0:0:70 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:49:20:29:50:100%:99:3.925E-29:0:0:0:0:50 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:53:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:46:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:39:18:21:40:97.5%:99:3.8137E-22:30:1:0:1:43 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:63:32:31:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 1296014 . C G . PASS AC=4;AF=0.013;AN=300;ANN=G|missense_variant|MODERATE|typA_Rv1165|gene1188|transcript|Transcript_gene1188|Coding|1/1|c.1847C>G|p.Ala616Gly|1847/1887|1847/1887|616/628||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1296014C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1296014C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:45 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:15 0/0:0:0:0:0:37:0%:70:1E0:48:37:21:16:39 0/0:0:0:0:0:16:0%:29:1E0:49:16:10:6:16 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:21 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:37:0%:70:1E0:50:37:18:19:38 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:28 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:35 0/0:0:0:0:0:28:0%:51:1E0:49:28:18:10:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:15:0%:29:1E0:50:15:5:10:15 0/0:0:0:0:0:51:0%:97:1E0:47:51:30:21:51 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:25 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:57:0%:99:1E0:43:57:32:25:60 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:11:22:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 0/0:0:0:0:0:36:0%:66:1E0:49:36:20:16:36 0/0:0:0:0:0:21:0%:40:1E0:48:21:15:6:22 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:38:0%:70:1E0:50:38:18:20:38 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:48 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:27:16:43 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:56:0%:99:1E0:46:56:30:26:56 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:40 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:46 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:46 0/0:0:0:0:0:47:0%:89:1E0:48:47:29:18:47 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:43 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:38:1:0:1:41:2.44%:66:5E-1:44:40:20:20:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:40 0/0:0:0:0:0:34:0%:62:1E0:49:34:17:17:34 0/0:0:0:0:0:17:0%:33:1E0:50:17:11:6:17 0/0:0:0:0:0:49:0%:93:1E0:43:49:30:19:49 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:15 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:43 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:51:0%:97:1E0:40:51:26:25:52 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:56:0%:99:1E0:45:56:28:28:56 0/0:0:0:0:0:35:0%:67:1E0:51:35:20:15:36 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:42 0/0:0:0:0:0:62:0%:99:1E0:42:62:29:33:62 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:42:0%:77:1E0:47:42:24:18:43 0/0:0:0:0:0:30:0%:55:1E0:51:30:13:17:30 0/0:0:0:0:0:17:0%:33:1E0:44:17:11:6:18 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:31 0/0:0:0:0:0:17:0%:33:1E0:51:17:7:10:18 0/0:0:0:0:0:27:0%:52:1E0:50:27:16:11:27 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:44 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:36 0/0:0:0:0:0:47:0%:89:1E0:41:47:19:28:48 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:65:0%:99:1E0:44:65:39:26:65 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:37:0%:70:1E0:46:37:26:11:37 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:16:0%:29:1E0:50:16:6:10:18 0/0:0:0:0:0:48:0%:89:1E0:39:48:26:22:49 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:58:0%:99:1E0:42:58:28:30:58 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:42 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:18 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:20 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:24:13:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:38 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:45 0/0:0:0:0:0:23:0%:44:1E0:44:23:17:6:24 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:24 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:37 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:36 0/0:0:0:0:0:43:0%:82:1E0:38:43:21:22:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:33 0/0:0:0:0:0:41:0%:78:1E0:38:41:21:20:41 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:29 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:42 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:51:0%:97:1E0:38:51:31:20:53 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:34:0%:62:1E0:38:34:20:14:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:56:0%:99:1E0:41:56:22:34:58 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 MTB_anc 1303336 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|fbiC_Rv1173|gene1196|transcript|Transcript_gene1196|Coding|1/1|c.406G>T|p.Ala136Ser|406/2571|406/2571|136/856||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1303336G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|delamanid_PA-824|||n.1303336G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1303336G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:56 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:22 0/0:0:0:0:0:47:0%:89:1E0:47:47:20:27:47 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:20 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:0:0:0:0:33:0%:63:1E0:50:33:17:16:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:49:38:15:23:39 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:47 0/0:0:0:0:0:26:0%:47:1E0:51:26:7:19:26 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:49 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:5:16:21 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:23 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:20 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:35 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:43 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:32 0/0:60:1:1:0:22:4.55%:31:5E-1:44:21:9:12:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:29 0/0:0:0:0:0:18:0%:32:1E0:46:18:6:12:18 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:50:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:38:1:0:1:34:2.94%:52:5E-1:44:32:9:23:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:51:0%:97:1E0:46:51:26:25:53 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:41 0/0:0:0:0:0:42:0%:77:1E0:47:42:13:29:42 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:41 0/0:39:1:1:0:46:2.17%:73:5E-1:46:45:27:18:47 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:18:0%:32:1E0:43:18:4:14:19 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:34 0/0:0:0:0:0:41:0%:78:1E0:47:41:17:24:44 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:50 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:13:24:38 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:20 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:16:0%:29:1E0:43:16:7:9:17 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:7:19:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:44 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:55:0%:99:1E0:47:55:28:27:55 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:14:0%:25:1E0:48:14:6:8:14 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:32:1:1:0:31:3.23%:48:5E-1:48:30:8:22:32 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:38:1:0:1:51:1.96%:84:5E-1:43:50:15:35:51 0/0:0:0:0:0:30:0%:55:1E0:41:30:9:21:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:8:20:29 0/0:0:0:0:0:41:0%:78:1E0:38:41:18:23:41 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:47 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:46 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:6:16:23 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:36 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:30 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:23 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:23 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:8:21:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:15:0%:29:1E0:43:15:6:9:17 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:40 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:34 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:24 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:51:0%:97:1E0:41:51:23:28:53 0/0:0:0:0:0:48:0%:89:1E0:43:48:22:26:50 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:21 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:21 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:48 0/0:0:0:0:0:49:0%:93:1E0:40:49:21:28:49 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:42 0/0:24:1:0:1:37:2.7%:59:5E-1:41:36:18:18:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:42 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:51 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:50 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:46 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:51:0%:97:1E0:38:51:30:21:52 0/0:38:1:1:0:44:2.27%:69:5E-1:44:43:20:23:44 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:43 0/0:0:0:0:0:53:0%:99:1E0:39:53:24:29:53 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:60:1:1:0:36:2.78%:55:5E-1:44:35:17:18:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:12:29:41 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:51 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:26 MTB_anc 1303410 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|fbiC_Rv1173|gene1196|transcript|Transcript_gene1196|Coding|1/1|c.480A>C|p.Glu160Asp|480/2571|480/2571|160/856||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1303410A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|delamanid_PA-824|||n.1303410A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1303410A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:61:0%:99:1E0:44:61:33:28:61 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:46:0%:85:1E0:46:46:20:26:46 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:33 0/0:0:0:0:0:35:0%:67:1E0:50:35:20:15:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:35:0%:67:1E0:47:35:11:24:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:47 0/0:0:0:0:0:22:0%:40:1E0:48:22:6:16:22 0/0:0:0:0:0:47:0%:89:1E0:48:47:26:21:47 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:19 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:43 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:24:0%:44:1E0:51:24:11:13:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:7:19:26 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:14 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:33:0%:63:1E0:53:33:21:12:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:62:0%:99:1E0:46:62:37:25:62 0/0:0:0:0:0:45:0%:85:1E0:45:45:18:27:45 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:40 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:39 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:21 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:47:23:5:18:23 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:37:1:1:0:34:2.94%:51:5E-1:44:33:11:22:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:16:0%:29:1E0:46:16:11:5:16 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:56:0%:99:1E0:47:56:28:28:56 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:36 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:45 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:17 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:19 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:34:0%:62:1E0:50:34:15:19:34 0/0:0:0:0:0:21:0%:40:1E0:49:21:15:6:21 0/0:0:0:0:0:43:0%:82:1E0:51:43:18:25:43 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:28 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:14:27:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:7:22:29 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:39 0/0:0:0:0:0:29:0%:55:1E0:38:29:10:19:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:18:0%:32:1E0:51:18:9:9:18 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:44 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:28 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:50 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:5:21:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:49 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:25 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:8:21:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:23 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:40 0/0:0:0:0:0:38:0%:70:1E0:37:38:23:15:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:24 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:45 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:27 0/0:0:0:0:0:56:0%:99:1E0:44:56:27:29:58 0/0:0:0:0:0:53:0%:99:1E0:43:53:30:23:53 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:20 0/0:0:0:0:0:54:0%:99:1E0:39:54:32:22:54 0/0:0:0:0:0:46:0%:85:1E0:41:46:16:30:47 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:39 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:48 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:50 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:47 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:32 0/0:0:0:0:0:47:0%:89:1E0:38:47:28:19:50 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:43 0/0:0:0:0:0:53:0%:99:1E0:41:53:27:26:53 0/0:0:0:0:0:58:0%:99:1E0:43:58:29:29:59 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:33 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:42 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:20 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:46 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:51 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:28 MTB_anc 1310316 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1178_Rv1178|gene1201|transcript|Transcript_gene1201|Coding|1/1|c.953T>C|p.Val318Ala|953/1089|953/1089|318/362||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1310316T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1310316T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:8:11:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:35:18:17:36:97.22%:99:8.3613E-20:37:1:1:0:37 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:38:18:20:39:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:48:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:63:23:40:63:100%:99:1.657E-37:0:0:0:0:64 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 1310662 . C T . PASS AC=16;AF=0.053;AN=300;ANN=T|missense_variant|MODERATE|Rv1179c_Rv1179c|gene1202|transcript|Transcript_gene1202|Coding|1/1|c.2638G>A|p.Val880Met|2638/2820|2638/2820|880/939||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1310662C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1310662C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:45 0/0:0:0:0:0:15:0%:29:1E0:49:15:10:5:15 0/0:0:0:0:0:53:0%:99:1E0:46:53:24:29:53 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:18 0/0:0:0:0:0:27:0%:52:1E0:51:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:37:1:1:0:29:3.45%:45:5E-1:48:28:11:17:29 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:42 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:11 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:12:0%:21:1E0:48:12:7:5:13 0/0:0:0:0:0:16:0%:29:1E0:48:16:11:5:17 0/0:0:0:0:0:15:0%:29:1E0:46:15:8:7:15 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:25 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:46 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:30:0%:55:1E0:50:30:12:18:30 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:23 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:51:25:13:12:25 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:27 0/0:0:0:0:0:29:0%:55:1E0:52:29:12:17:30 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:53:0%:99:1E0:47:53:29:24:53 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:46:0%:85:1E0:47:46:27:19:47 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:41 0/0:39:1:0:1:41:2.44%:66:5E-1:47:40:18:22:41 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:45 0/0:0:0:0:0:61:0%:99:1E0:43:61:32:29:62 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:47 0/0:0:0:0:0:18:0%:32:1E0:52:18:8:10:18 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:38:1:1:0:30:3.33%:44:5E-1:44:29:18:11:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:48 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:48 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:41 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:10:13:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:28:13:41 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:40:0%:74:1E0:48:40:22:18:40 0/0:0:0:0:0:48:0%:89:1E0:47:48:19:29:48 0/0:0:0:0:0:34:0%:62:1E0:49:34:10:24:35 0/0:0:0:0:0:38:0%:70:1E0:48:38:22:16:38 0/0:0:0:0:0:16:0%:29:1E0:44:16:11:5:16 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:34 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:31 0/0:0:0:0:0:11:0%:22:1E0:49:11:7:4:11 0/0:0:0:0:0:36:0%:66:1E0:46:36:23:13:36 0/0:0:0:0:0:44:0%:81:1E0:44:44:27:17:44 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:17 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:49 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:17:0%:33:1E0:47:17:8:9:17 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:10:0%:17:1E0:53:10:4:6:10 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:18:0%:32:1E0:52:18:8:10:18 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:35 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:21 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:30:0%:55:1E0:47:30:11:19:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:21 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:6:20:26 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:38 0/0:0:0:0:0:26:0%:47:1E0:39:26:18:8:26 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:25:13:40 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:25 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:52:0%:96:1E0:39:52:24:28:53 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:19 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:38 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:21 MTB_anc 1313338 . G GC . PASS AC=298;AF=0.993;AN=300;ANN=GC|intergenic_region|MODIFIER|Rv1179c_Rv1179c-pks3_Rv1180|gene1202-gene1203|intergenic_region|gene1202-gene1203|||n.1313338_1313339insC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:44:20:24:45:97.78%:99:4.4304E-25:33:1:0:1:45 1/1:46:24:11:13:24:96%:99:2.0568E-13:35:1:0:1:25 1/1:44:45:24:21:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:26:12:14:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:18:11:7:16:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:34:16:18:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:20:12:32:96.97%:99:4.7095E-18:32:1:0:1:33 1/1:39:28:13:15:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:20:12:33:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:45:16:9:7:17:94.12%:81:7.7134E-9:35:1:0:1:17 1/1:40:30:16:14:27:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:40:17:23:40:97.56%:99:9.8874E-23:29:1:1:0:41 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:17:9:8:18:94.44%:86:2.0936E-9:34:1:1:0:19 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:11:13:25:96%:99:2.0568E-13:33:1:0:1:26 1/1:40:22:9:13:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:11:16:25:96.43%:99:3.7915E-15:34:1:1:0:28 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:51:25:26:50:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:34:18:16:32:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:22:13:9:23:95.65%:99:2.9149E-12:37:1:0:1:23 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:25:12:13:26:96.15%:99:5.4444E-14:39:1:0:1:26 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:36:13:23:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:35:14:21:37:94.59%:99:8.3613E-20:33:1:0:1:37 1/1:45:23:12:11:25:92%:99:2.7767E-12:36:2:1:1:25 1/1:45:21:12:9:23:95.45%:99:1.0931E-11:60:1:1:0:23 1/1:42:36:16:20:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:40:29:12:17:29:96.67%:99:2.6212E-16:39:1:0:1:30 1/1:47:52:26:26:55:94.55%:99:3.1317E-28:31:3:1:2:55 1/1:45:34:11:23:35:97.14%:99:3.2089E-19:33:1:0:1:35 1/1:43:32:23:9:32:94.12%:99:4.7095E-18:60:1:0:1:34 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:11:13:24:96%:99:2.0568E-13:33:1:1:0:25 1/1:39:18:8:10:21:94.74%:92:5.6585E-10:34:1:0:1:21 1/1:41:26:11:15:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:6:19:27:92.59%:99:5.4444E-14:60:1:0:1:27 1/1:43:31:12:19:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:40:16:24:41:97.56%:99:9.8874E-23:33:1:0:1:41 1/1:44:36:17:19:37:97.3%:99:2.1762E-20:34:1:1:0:38 1/1:46:52:25:27:50:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:27:10:17:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:27:10:17:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:40:42:17:25:39:97.67%:99:6.6289E-24:37:1:0:1:43 1/1:43:32:13:19:31:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:44:21:23:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:13:14:26:96.43%:99:3.7915E-15:34:1:0:1:29 1/1:46:37:21:16:38:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:45:20:25:44:97.83%:99:1.1441E-25:33:1:0:1:46 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:40:18:22:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:39:22:17:40:97.5%:99:3.8137E-22:33:1:0:1:40 1/1:47:19:7:12:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:20:10:10:22:90.91%:98:1.3117E-10:33:2:1:1:22 1/1:44:37:18:19:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:16:8:8:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:19:19:39:95%:99:8.0088E-21:32:2:1:1:40 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:28:11:17:29:96.55%:99:9.9776E-16:38:1:1:0:30 1/1:44:28:10:18:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:34:18:16:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:15:12:27:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:48:24:13:11:26:96%:99:2.0568E-13:39:1:1:0:26 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:17:20:37:97.37%:99:5.6582E-21:35:1:0:1:38 1/1:45:36:16:20:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:24:16:8:23:100%:99:3.101E-14:0:0:0:0:25 1/1:49:24:11:13:24:96%:99:3.101E-14:0:0:0:0:24 1/1:41:18:12:6:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:51:22:29:50:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:33:18:15:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:23:13:10:22:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:40:35:18:17:32:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:32:15:17:29:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:28:15:13:30:93.33%:99:9.9776E-16:33:1:0:1:30 1/1:51:24:17:7:24:96%:99:3.101E-14:0:0:0:0:24 1/1:43:25:10:15:27:92.59%:99:2.0853E-13:33:2:1:1:27 1/1:37:26:15:11:23:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 0/1:42:12:6:6:15:80%:55:2.9913E-6:34:2:0:2:15 1/1:45:26:14:12:26:96.3%:99:1.4382E-14:34:1:1:0:27 1/1:46:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:14:17:31:96.88%:99:1.8007E-17:28:1:1:0:32 1/1:45:37:19:18:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:33:22:11:34:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:17:8:9:18:94.44%:86:2.0936E-9:37:1:1:0:18 1/1:44:39:18:21:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:33:23:10:28:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:47:17:30:47:97.92%:99:7.6145E-27:39:1:0:1:48 1/1:39:34:14:20:32:97.14%:99:3.2089E-19:35:1:1:0:35 1/1:39:32:16:16:29:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:24:11:13:23:100%:99:3.101E-14:0:0:0:0:24 1/1:40:56:24:32:57:98.25%:99:3.7452E-32:34:1:1:0:57 1/1:43:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:26:16:10:26:96.3%:99:1.4382E-14:37:1:1:0:28 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:47:19:28:47:95.92%:99:5.0044E-26:32:2:1:1:49 1/1:37:42:18:24:39:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:44:17:27:45:100%:99:3.8097E-26:0:0:0:0:45 1/1:35:44:26:18:38:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:47:25:22:45:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:26:9:17:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:38:20:18:37:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:38:33:19:14:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:37:20:17:37:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:39:29:19:10:29:93.55%:99:1.1344E-15:33:2:1:1:31 1/1:35:37:20:17:33:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:34:14:20:31:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:37:21:16:41:90.24%:99:3.0128E-20:34:2:0:2:41 1/1:43:36:18:18:38:92.31%:99:4.2179E-19:34:3:1:2:39 0/1:42:34:13:21:37:89.47%:99:1.5887E-18:44:2:1:1:39 1/1:40:32:18:14:34:94.12%:99:2.2142E-17:47:2:0:2:34 1/1:41:38:20:18:39:95%:99:8.0088E-21:34:2:1:1:40 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:30:16:14:31:96.77%:99:6.8754E-17:30:1:1:0:31 1/1:40:41:20:21:39:97.62%:99:2.5612E-23:76:1:1:0:42 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:54:26:28:57:94.74%:99:4.2321E-30:48:2:0:2:57 1/1:38:31:16:15:32:93.94%:99:1.8007E-17:34:1:1:0:34 MTB_anc 1319002 . C CT . PASS AC=2;AF=6.667e-03;AN=300;ANN=CT|frameshift_variant|HIGH|pks4_Rv1181|gene1204|transcript|Transcript_gene1204|Coding|1/1|c.3771dupT|p.Ala1258fs|3772/4749|3772/4749|1258/1582||INFO_REALIGN_3_PRIME,CT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1319002_1319003insT||||||,CT|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1319002_1319003insT||||||;HET=0;LOF=(pks4_Rv1181|gene1204|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:0:1:61:1.64%:99:5E-1:43:60:36:24:61 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:49:0%:93:1E0:45:49:33:16:51 0/0:60:1:0:1:27:3.7%:41:5E-1:46:26:16:10:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:25:11:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:26 0/0:0:0:0:0:26:0%:47:1E0:49:26:17:9:26 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:11 0/0:0:0:0:0:19:0%:37:1E0:47:19:6:13:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:20:10:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:17 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:51 0/0:0:0:0:0:36:0%:66:1E0:41:36:24:12:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:40 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:55:0%:99:1E0:40:55:28:27:58 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:7:11:19 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:47:0%:89:1E0:43:47:30:17:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:46:0%:85:1E0:44:46:32:14:47 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:46 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:46 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:41:0%:78:1E0:45:41:28:13:41 0/0:0:0:0:0:49:0%:93:1E0:44:49:30:19:50 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:36 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:53 0/0:0:0:0:0:31:0%:59:1E0:49:31:20:11:31 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:54:0%:99:1E0:41:54:24:30:54 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:17:9:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:39 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:25:0%:48:1E0:45:25:20:5:26 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:50:0%:92:1E0:43:50:26:24:50 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:42 0/0:0:0:0:0:59:0%:99:1E0:46:59:33:26:59 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:56:0%:99:1E0:44:56:32:24:56 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:50:29:21:8:29 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:16 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:40:0%:74:1E0:40:40:26:14:41 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:42 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:41:0%:78:1E0:42:41:28:13:42 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:8:24:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:40 0/0:0:0:0:0:16:0%:29:1E0:49:16:7:9:16 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:49:27:10:17:28 0/0:0:0:0:0:54:0%:99:1E0:39:54:34:20:54 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:50:0%:92:1E0:42:50:30:20:52 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:25:7:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:60:1:0:1:37:2.7%:59:5E-1:43:36:19:17:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:37:32:18:14:33 0/0:0:0:0:0:39:0%:74:1E0:38:39:26:13:40 1/1:38:32:22:10:33:96.97%:99:4.7095E-18:32:1:1:0:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:36 0/0:0:0:0:0:53:0%:99:1E0:42:53:29:24:53 0/0:0:0:0:0:70:0%:99:1E0:41:70:37:33:70 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:13:5:18 0/0:0:0:0:0:46:0%:85:1E0:39:46:35:11:46 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:34 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:35 0/0:0:0:0:0:42:0%:77:1E0:39:42:28:14:44 0/0:0:0:0:0:44:0%:81:1E0:39:44:24:20:48 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:28 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:47:0%:89:1E0:38:47:25:22:48 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:26 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:45:0%:85:1E0:39:45:30:15:46 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:39:1:1:0:37:2.7%:59:5E-1:40:36:21:15:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:19 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:42 0/0:0:0:0:0:48:0%:89:1E0:38:48:33:15:48 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:48 MTB_anc 1321894 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|synonymous_variant|LOW|mmpL10_Rv1183|gene1206|transcript|Transcript_gene1206|Coding|1/1|c.375A>G|p.Thr125Thr|375/3009|375/3009|125/1002||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1321894A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1321894A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:53 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:49:0%:93:1E0:49:49:26:23:50 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:30 0/0:0:0:0:0:37:0%:70:1E0:50:37:12:25:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:20 0/0:0:0:0:0:48:0%:89:1E0:49:48:18:30:48 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:32 0/0:0:0:0:0:44:0%:81:1E0:47:44:25:19:44 0/0:0:0:0:0:51:0%:97:1E0:45:51:34:17:52 0/0:0:0:0:0:37:0%:70:1E0:48:37:16:21:37 0/0:0:0:0:0:50:0%:92:1E0:45:50:25:25:50 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:38 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:22:0%:40:1E0:50:22:15:7:23 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:33 0/0:0:0:0:0:67:0%:99:1E0:44:67:29:38:67 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:25 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:23:11:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:33 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:57:0%:99:1E0:48:57:25:32:57 0/0:0:0:0:0:47:0%:89:1E0:47:47:23:24:50 0/0:0:0:0:0:52:0%:96:1E0:47:52:29:23:56 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:29 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:42 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:19 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:35 0/0:0:0:0:0:40:0%:74:1E0:39:40:17:23:41 0/0:0:0:0:0:45:0%:85:1E0:47:45:25:20:45 0/0:0:0:0:0:26:0%:47:1E0:54:26:13:13:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:37 0/0:0:0:0:0:18:0%:32:1E0:44:18:6:12:18 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:48:0%:89:1E0:45:48:16:32:48 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:46:0%:85:1E0:46:46:20:26:48 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:50:0%:92:1E0:47:50:28:22:50 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:15:0%:29:1E0:51:15:5:10:15 0/0:0:0:0:0:28:0%:51:1E0:45:28:8:20:29 0/0:0:0:0:0:43:0%:82:1E0:46:43:16:27:43 0/0:0:0:0:0:30:0%:55:1E0:53:30:15:15:31 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:19 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:25 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:33:0%:63:1E0:47:33:22:11:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:35:0%:67:1E0:50:35:23:12:35 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:48:33:21:12:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:38 0/0:0:0:0:0:20:0%:36:1E0:53:20:14:6:20 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:38 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:44 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:35 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:40 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:38 0/0:0:0:0:0:53:0%:99:1E0:41:53:30:23:56 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:24:14:39 0/0:0:0:0:0:56:0%:99:1E0:42:56:26:30:57 0/0:60:1:0:1:32:3.12%:48:5E-1:40:31:15:16:33 1/1:40:28:17:11:29:96.55%:99:9.9776E-16:38:1:1:0:30 0/0:0:0:0:0:51:0%:97:1E0:40:51:29:22:53 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:55 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:44 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:53 0/0:0:0:0:0:49:0%:93:1E0:40:49:20:29:52 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:42 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:43 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:47 0/0:0:0:0:0:51:0%:97:1E0:40:51:21:30:54 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:38 0/0:0:0:0:0:54:0%:99:1E0:40:54:24:30:57 0/0:0:0:0:0:50:0%:92:1E0:41:50:15:35:53 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:46 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:49 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:45 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:45 0/0:0:0:0:0:14:0%:25:1E0:43:14:9:5:16 0/0:0:0:0:0:35:0%:67:1E0:38:35:20:15:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:69:0%:99:1E0:43:69:25:44:69 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 MTB_anc 1324506 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|mmpL10_Rv1183|gene1206|transcript|Transcript_gene1206|Coding|1/1|c.2987T>C|p.Val996Ala|2987/3009|2987/3009|996/1002||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1324506T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1324506T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:28:14:14:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:69:40:29:69:100%:99:4.233E-41:0:0:0:0:73 1/1:50:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:18:16:35:97.14%:99:3.2089E-19:38:1:1:0:35 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:17:15:33:96.97%:99:4.7095E-18:36:1:0:1:33 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:46:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:33:19:14:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:9:12:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:35:18:17:36:97.22%:99:8.3613E-20:33:1:1:0:37 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:19:21:41:97.56%:99:9.8874E-23:60:1:0:1:41 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:76:37:39:76:100%:99:2.711E-45:0:0:0:0:76 1/1:41:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:37:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:53:31:22:54:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 1329413 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|rocA_Rv1187|gene1210|transcript|Transcript_gene1210|Coding|1/1|c.24G>T|p.Pro8Pro|24/1632|24/1632|8/543||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1329413G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1329413G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:47 0/0:0:0:0:0:8:0%:14:1E0:48:8:6:2:9 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:48 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:18 0/0:0:0:0:0:23:0%:44:1E0:44:23:6:17:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:32 0/0:0:0:0:0:37:0%:70:1E0:48:37:23:14:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:48 0/0:0:0:0:0:16:0%:29:1E0:44:16:3:13:16 0/0:0:0:0:0:45:0%:85:1E0:44:45:15:30:46 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:17:0%:33:1E0:47:17:8:9:17 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:16 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:53:0%:99:1E0:45:53:24:29:53 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:44 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:18 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:24:7:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:34 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:21 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:17 0/0:0:0:0:0:25:0%:48:1E0:49:25:9:16:26 0/0:0:0:0:0:55:0%:99:1E0:41:55:25:30:56 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:26 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:50 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:38 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:41:0%:78:1E0:38:41:14:27:42 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:4:14:18 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:18 0/0:0:0:0:0:54:0%:99:1E0:40:54:24:30:55 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:51:0%:97:1E0:41:51:28:23:52 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:41 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:37 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:22 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:22 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:36:0%:66:1E0:38:36:21:15:39 0/0:0:0:0:0:49:0%:93:1E0:38:49:25:24:49 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:29 0/0:0:0:0:0:17:0%:33:1E0:38:17:4:13:17 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:56 0/0:0:0:0:0:28:0%:51:1E0:40:28:8:20:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:23 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:42 0/0:0:0:0:0:39:0%:74:1E0:37:39:16:23:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:25:12:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:30 0/0:0:0:0:0:41:0%:78:1E0:38:41:25:16:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:33 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:39 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:40 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:30 0/0:0:0:0:0:66:0%:99:1E0:38:66:32:34:67 0/0:0:0:0:0:36:0%:66:1E0:38:36:19:17:36 0/0:0:0:0:0:52:0%:96:1E0:38:52:20:32:53 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:36 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:23 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:21 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:35 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:28 0/0:0:0:0:0:21:0%:40:1E0:40:21:6:15:21 0/0:37:1:1:0:29:3.45%:45:5E-1:42:28:12:16:29 0/0:0:0:0:0:48:0%:89:1E0:43:48:17:31:49 0/0:0:0:0:0:47:0%:89:1E0:41:47:28:19:47 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 MTB_anc 1331500 . A G . PASS AC=100;AF=0.333;AN=300;ANN=G|missense_variant|MODERATE|Rv1188_Rv1188|gene1211|transcript|Transcript_gene1211|Coding|1/1|c.480A>G|p.Ile160Met|480/990|480/990|160/329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1331500A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1331500A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:52 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:21 1/1:46:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:0:0:0:0:26:0%:47:1E0:51:26:9:17:26 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:18:0%:32:1E0:52:18:12:6:18 0/0:0:0:0:0:65:0%:99:1E0:44:65:29:36:68 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:20:1:1:0:21:4.76%:31:5E-1:46:20:9:11:21 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:50:0%:92:1E0:41:50:29:21:50 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:34 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:40 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:16 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:45 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 1/1:51:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:36 0/0:0:0:0:0:61:0%:99:1E0:44:61:29:32:63 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:53 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:24 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:46 0/0:0:0:0:0:46:0%:85:1E0:45:46:30:16:47 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:45 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:25 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:44 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:38 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:61:0%:99:1E0:41:61:29:32:62 0/0:0:0:0:0:43:0%:82:1E0:51:43:23:20:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:9:21:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:41 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:22 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:59:0%:99:1E0:46:59:29:30:59 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:39:1:0:1:18:5.56%:24:5E-1:45:17:7:10:19 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:25 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:41 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:33 0/0:0:0:0:0:10:0%:17:1E0:48:10:7:3:10 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:50:0%:92:1E0:43:50:20:30:54 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:41:0%:78:1E0:42:41:14:27:41 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:8:19:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:45 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:40:0%:74:1E0:49:40:17:23:41 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:46 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:38 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:42:20:22:43:97.67%:99:6.6289E-24:60:1:0:1:43 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:43 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:22 1/1:44:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:39 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:20 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:48 0/0:0:0:0:0:47:0%:89:1E0:41:47:16:31:47 1/1:43:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:47:0%:89:1E0:37:47:19:28:48 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:48:16:32:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:36 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:16:9:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:38 0/0:0:0:0:0:45:0%:85:1E0:39:45:24:21:47 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:48 0/0:0:0:0:0:47:0%:89:1E0:44:47:18:29:47 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:47 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 MTB_anc 1335492 . C A . PASS AC=1;AF=3.356e-03;AN=298;ANN=A|missense_variant|MODERATE|Rv1192_Rv1192|gene1215|transcript|Transcript_gene1215|Coding|1/1|c.566C>A|p.Ala189Glu|566/828|566/828|189/275||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1335492C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1335492C>A||||||;HOM=0;set=filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:20:3:0:3:29:10.34%:31:1.1842E-1:42:26:13:13:33 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:22 0/0:29:2:0:2:31:6.45%:40:2.459E-1:42:29:18:11:37 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:17 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:21 0/0:28:4:0:4:29:13.79%:26:5.5981E-2:45:25:13:12:31 0/0:20:1:0:1:24:4.17%:34:5E-1:46:23:12:11:26 0/0:0:0:0:0:13:0%:25:1E0:42:13:6:7:15 0/0:26:2:0:2:19:10.53%:21:2.4324E-1:46:17:7:10:26 0/0:20:1:0:1:24:4.17%:34:5E-1:48:23:8:15:25 0/0:20:1:0:1:24:4.17%:34:5E-1:47:23:10:13:29 0/0:30:5:0:5:39:12.82%:35:2.7273E-2:42:34:14:20:42 0/0:35:1:0:1:15:6.67%:21:5E-1:50:14:5:9:16 0/0:35:4:0:4:27:14.81%:23:5.5494E-2:46:23:12:11:32 0/0:32:4:0:4:26:15.38%:20:5.5222E-2:42:22:9:13:34 0/0:31:5:0:5:29:17.24%:22:2.5917E-2:44:24:12:12:30 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:17 0/0:33:1:0:1:17:5.88%:24:5E-1:40:16:10:6:19 0/0:38:1:0:1:17:5.88%:24:5E-1:46:16:8:8:18 0/0:0:0:0:0:23:0%:44:1E0:38:23:6:17:23 0/0:31:3:0:3:25:12%:25:1.1735E-1:40:22:11:11:26 0/0:37:1:0:1:27:3.7%:41:5E-1:41:26:14:12:32 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:20 0/0:28:2:0:2:33:6.06%:44:2.4615E-1:46:31:13:18:36 0/0:34:4:0:4:34:11.76%:31:5.6946E-2:41:30:18:12:34 0/0:24:4:0:4:23:17.39%:18:5.4264E-2:45:19:9:10:27 0/0:20:2:0:2:14:14.29%:12:2.4074E-1:40:12:5:7:15 0/0:33:1:0:1:20:5%:27:5E-1:47:19:10:9:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:31 0/0:33:2:0:2:24:8.33%:27:2.4468E-1:43:22:12:10:24 0/0:34:1:0:1:33:3.03%:52:5E-1:44:32:12:20:35 0/0:0:0:0:0:14:0%:25:1E0:41:14:6:8:16 0/0:35:1:0:1:27:3.7%:41:5E-1:44:26:13:13:29 0/0:37:1:0:1:25:4%:38:5E-1:40:24:14:10:26 0/0:20:1:0:1:26:3.85%:38:5E-1:45:25:10:15:31 0/0:29:4:0:4:25:16%:21:5.4928E-2:40:21:11:10:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:30 0/0:35:2:0:2:44:4.55%:60:2.4713E-1:45:42:20:22:50 0/0:0:0:0:0:35:0%:67:1E0:46:35:11:24:39 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:24 0/0:20:2:0:2:21:9.52%:25:2.439E-1:39:19:9:10:22 0/0:26:2:0:2:24:8.33%:27:2.4468E-1:41:22:10:12:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:26 0/0:0:0:0:0:22:0%:40:1E0:41:22:7:15:23 0/0:26:5:0:5:34:14.71%:27:2.6693E-2:43:29:9:20:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:34 0/0:0:0:0:0:18:0%:32:1E0:43:18:12:6:21 0/0:38:1:0:1:35:2.86%:55:5E-1:40:34:16:18:38 0/0:24:3:0:3:28:10.71%:28:1.1818E-1:39:25:9:16:30 0/0:37:1:0:1:20:5%:27:5E-1:41:19:11:8:24 0/0:26:2:0:2:16:12.5%:15:2.4194E-1:45:14:9:5:21 0/0:0:0:0:0:26:0%:47:1E0:42:26:8:18:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:8:20:32 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:17 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:24 0/0:27:2:0:2:38:5.26%:50:2.4667E-1:39:36:18:18:40 0/0:34:3:0:3:32:9.38%:34:1.1905E-1:38:29:16:13:33 0/0:20:1:0:1:22:4.55%:31:5E-1:40:21:9:12:23 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:28 0/0:29:2:0:2:24:8.33%:27:2.4468E-1:41:22:7:15:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:28 0/0:36:2:0:2:23:8.7%:28:2.4444E-1:46:21:8:13:26 0/0:33:1:0:1:18:5.56%:24:5E-1:44:17:10:7:25 0/0:26:2:0:2:30:6.67%:37:2.4576E-1:46:28:13:15:34 0/0:24:3:0:3:34:8.82%:37:1.194E-1:44:31:13:18:38 0/0:20:1:0:1:17:5.88%:24:5E-1:39:16:9:7:18 0/0:0:0:0:0:31:0%:59:1E0:46:31:8:23:32 0/0:33:1:0:1:20:5%:27:5E-1:46:19:8:11:21 0/0:35:2:0:2:24:8.33%:27:2.4468E-1:44:22:6:16:25 0/0:20:1:0:1:29:3.45%:45:5E-1:45:28:15:13:34 0/0:0:0:0:0:28:0%:51:1E0:50:28:16:12:32 0/0:31:4:0:4:23:17.39%:18:5.4264E-2:48:19:7:12:23 0/0:33:1:0:1:25:4%:38:5E-1:48:24:17:7:28 0/0:38:2:0:2:33:6.06%:44:2.4615E-1:40:31:11:20:35 0/0:60:1:0:1:20:5%:27:5E-1:46:19:8:11:20 0/0:20:1:0:1:24:4.17%:34:5E-1:44:23:10:13:26 0/0:36:1:0:1:22:4.55%:31:5E-1:49:21:10:11:22 0/0:37:1:0:1:22:4.55%:31:5E-1:42:21:10:11:22 0/0:20:1:0:1:24:4.17%:34:5E-1:43:23:11:12:27 0/0:20:1:0:1:26:3.85%:38:5E-1:40:25:11:14:28 0/0:30:3:0:3:41:7.32%:50:1.2037E-1:42:38:17:21:48 0/0:34:2:0:2:29:6.9%:37:2.4561E-1:47:27:12:15:31 0/0:28:2:0:2:30:6.67%:37:2.4576E-1:42:28:16:12:34 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:27 0/0:35:2:0:2:32:6.25%:40:2.4603E-1:40:30:11:19:35 0/0:34:2:0:2:25:8%:31:2.449E-1:40:23:13:10:25 0/0:33:2:0:2:26:7.69%:30:2.451E-1:44:24:9:15:27 0/0:0:0:0:0:26:0%:47:1E0:50:26:10:16:28 0/0:20:1:0:1:21:4.76%:31:5E-1:45:20:8:12:23 0/0:26:2:0:2:31:6.45%:40:2.459E-1:43:29:11:18:34 0/0:26:2:0:2:24:8.33%:27:2.4468E-1:46:22:11:11:28 0/0:36:3:0:3:35:8.57%:40:1.1957E-1:44:32:18:14:38 0/0:20:2:0:2:21:9.52%:25:2.439E-1:42:19:7:12:21 0/1:31:7:0:7:36:19.44%:22:5.6667E-3:39:29:17:12:40 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:16 0/0:33:1:0:1:19:5.26%:28:5E-1:39:18:9:9:20 0/0:33:1:0:1:32:3.12%:48:5E-1:40:31:14:17:32 0/0:34:2:0:2:26:7.69%:30:2.451E-1:38:24:15:9:29 0/0:24:3:0:3:34:8.82%:37:1.194E-1:42:31:12:19:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:24 0/0:30:3:0:3:27:11.11%:28:1.1792E-1:40:24:14:10:32 0/0:39:1:0:1:25:4%:38:5E-1:41:24:12:12:28 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:23 0/0:37:1:0:1:24:4.17%:34:5E-1:45:23:10:13:26 0/0:20:1:0:1:30:3.33%:44:5E-1:43:29:17:12:36 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:22 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:30 0/0:33:1:0:1:29:3.45%:45:5E-1:42:28:10:18:32 0/0:28:2:0:2:18:11.11%:18:2.4286E-1:39:16:9:7:22 0/0:0:0:0:0:15:0%:29:1E0:39:15:6:9:18 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:26 0/0:26:2:0:2:18:11.11%:18:2.4286E-1:35:16:9:7:19 0/0:37:2:0:2:26:7.69%:30:2.451E-1:39:24:9:15:31 0/0:35:1:0:1:18:5.56%:24:5E-1:35:17:11:6:20 0/0:36:3:0:3:22:13.64%:19:1.1628E-1:43:19:9:10:23 0/0:36:1:0:1:17:5.88%:24:5E-1:39:16:10:6:18 0/0:33:1:0:1:41:2.44%:66:5E-1:42:40:19:21:43 0/0:33:3:0:3:39:7.69%:47:1.2013E-1:40:36:21:15:44 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:29 0/0:20:1:0:1:20:5%:27:5E-1:42:19:11:8:24 0/0:30:3:0:3:36:8.33%:40:1.1972E-1:38:33:15:18:41 0/0:26:2:0:2:23:8.7%:28:2.4444E-1:37:21:13:8:28 0/0:35:5:0:5:36:13.89%:29:2.6944E-2:37:31:16:15:44 0/0:33:2:0:2:25:8%:31:2.449E-1:37:23:14:9:30 0/0:35:4:0:4:24:16.67%:18:5.461E-2:39:20:15:5:30 0/0:35:5:0:5:29:17.24%:22:2.5917E-2:40:24:12:12:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:33 0/0:35:2:0:2:22:9.09%:24:2.4419E-1:37:20:12:8:29 0/0:31:4:0:4:31:12.9%:29:5.6405E-2:38:27:19:8:38 0/0:33:2:0:2:26:7.69%:30:2.451E-1:38:24:11:13:30 0/0:32:3:0:3:26:11.54%:25:1.1765E-1:34:23:11:12:27 0/0:26:2:0:2:22:9.09%:24:2.4419E-1:37:20:15:5:26 0/0:0:0:0:0:18:0%:32:1E0:46:18:7:11:20 0/0:36:5:0:5:42:11.9%:38:2.7555E-2:38:37:23:14:44 0/0:34:3:0:3:25:12%:25:1.1735E-1:42:22:9:13:27 0/0:37:2:0:2:26:7.69%:30:2.451E-1:43:24:10:14:28 0/0:36:2:0:2:25:8%:31:2.449E-1:42:23:9:14:29 0/0:26:2:0:2:17:11.76%:18:2.4242E-1:41:15:4:11:18 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:25 0/0:33:5:0:5:26:19.23%:17:2.531E-2:42:21:9:12:28 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:24 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:31 0/0:0:0:0:0:14:0%:25:1E0:42:14:7:7:14 0/0:33:5:0:5:26:19.23%:17:2.531E-2:40:21:12:9:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:27 0/0:26:5:0:5:23:21.74%:14:2.4548E-2:41:18:12:6:26 0/0:37:2:0:2:33:6.06%:44:2.4615E-1:40:31:16:15:35 MTB_anc 1338794 . TCGG T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|intergenic_region|MODIFIER|Rv1194c_Rv1194c-PE13_Rv1195|gene1217-gene1218|intergenic_region|gene1217-gene1218|||n.1338795_1338797delCGG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:36:46:16:30:50 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:13 0/0:0:0:0:0:45:0%:85:1E0:37:45:22:23:47 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:18 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:20 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:41 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:19 0/0:0:0:0:0:35:0%:67:1E0:38:35:10:25:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:8:21:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:24 0/0:0:0:0:0:31:0%:59:1E0:36:31:10:21:31 0/0:0:0:0:0:24:0%:44:1E0:37:24:7:17:26 0/0:0:0:0:0:35:0%:67:1E0:36:35:14:21:37 0/0:0:0:0:0:16:0%:29:1E0:35:16:5:11:16 0/0:0:0:0:0:30:0%:55:1E0:36:30:10:20:31 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:29 0/0:0:0:0:0:11:0%:22:1E0:41:11:4:7:11 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:18 0/0:0:0:0:0:23:0%:44:1E0:38:23:7:16:24 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:16 0/0:0:0:0:0:38:0%:70:1E0:36:38:15:23:38 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:25 0/0:0:0:0:0:45:0%:85:1E0:38:45:18:27:46 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:17 0/0:0:0:0:0:17:0%:33:1E0:42:17:10:7:18 0/0:0:0:0:0:12:0%:21:1E0:40:12:6:6:13 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:24 0/0:0:0:0:0:14:0%:25:1E0:35:14:8:6:15 0/0:0:0:0:0:15:0%:29:1E0:35:15:4:11:16 0/0:0:0:0:0:34:0%:62:1E0:38:34:9:25:34 0/0:0:0:0:0:22:0%:40:1E0:37:22:7:15:23 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:37 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:22 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:28 0/0:30:1:0:1:52:1.92%:83:5E-1:39:51:21:30:56 0/0:0:0:0:0:28:0%:51:1E0:37:28:8:20:30 0/0:0:0:0:0:32:0%:59:1E0:37:32:11:21:32 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:21 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:30 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:21 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:22 0/0:38:1:0:1:25:4%:38:5E-1:39:24:7:17:25 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:18 0/0:0:0:0:0:19:0%:37:1E0:38:19:5:14:19 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:29 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:25 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:15 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:26 0/0:0:0:0:0:11:0%:22:1E0:40:11:3:8:11 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:24 0/0:0:0:0:0:30:0%:55:1E0:37:30:12:18:31 0/0:0:0:0:0:37:0%:70:1E0:37:37:17:20:38 0/0:0:0:0:0:24:0%:44:1E0:37:24:6:18:26 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:17 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:24 0/0:0:0:0:0:24:0%:44:1E0:35:24:9:15:24 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:22 0/0:0:0:0:0:28:0%:51:1E0:36:28:9:19:30 0/0:0:0:0:0:29:0%:55:1E0:36:29:10:19:29 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:36:37:17:20:37 0/0:0:0:0:0:38:0%:70:1E0:37:38:15:23:41 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:30 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:25 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:19 0/0:0:0:0:0:26:0%:47:1E0:38:26:5:21:26 0/0:0:0:0:0:35:0%:67:1E0:37:35:15:20:35 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:36:0%:66:1E0:40:36:12:24:37 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:29 0/0:0:0:0:0:14:0%:25:1E0:40:14:5:9:15 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:19 0/1:39:16:6:10:18:88.89%:76:2.0936E-8:36:2:1:1:18 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:20 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:18 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:28 0/0:0:0:0:0:22:0%:40:1E0:36:22:7:15:24 0/0:0:0:0:0:27:0%:52:1E0:38:27:8:19:27 0/0:0:0:0:0:18:0%:32:1E0:35:18:8:10:18 0/0:0:0:0:0:23:0%:44:1E0:36:23:6:17:24 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:31:0%:59:1E0:39:31:10:21:32 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:15 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:29 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:26 0/0:0:0:0:0:37:0%:70:1E0:37:37:11:26:39 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:21 0/0:0:0:0:0:20:0%:36:1E0:34:20:6:14:21 0/0:0:0:0:0:30:0%:55:1E0:39:30:9:21:31 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:29 0/0:0:0:0:0:35:0%:67:1E0:36:35:12:23:36 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:19 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:28 0/0:0:0:0:0:22:0%:40:1E0:37:22:7:15:25 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:22 0/0:0:0:0:0:17:0%:33:1E0:37:17:11:6:18 0/0:0:0:0:0:21:0%:40:1E0:35:21:5:16:21 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:19 0/0:0:0:0:0:29:0%:55:1E0:35:29:12:17:30 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:24 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:31 0/0:0:0:0:0:32:0%:59:1E0:37:32:11:21:32 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:24 0/0:0:0:0:0:32:0%:59:1E0:37:32:12:20:32 0/0:0:0:0:0:33:0%:63:1E0:36:33:10:23:34 0/0:0:0:0:0:38:0%:70:1E0:36:38:16:22:40 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:28 0/0:0:0:0:0:36:0%:66:1E0:37:36:12:24:38 0/0:0:0:0:0:16:0%:29:1E0:35:16:5:11:18 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:32 0/0:0:0:0:0:43:0%:82:1E0:37:43:13:30:45 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:25 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:15 0/0:0:0:0:0:39:0%:74:1E0:36:39:12:27:41 0/0:0:0:0:0:28:0%:51:1E0:36:28:10:18:28 0/0:0:0:0:0:30:0%:55:1E0:37:30:12:18:31 0/0:0:0:0:0:28:0%:51:1E0:35:28:10:18:30 0/0:0:0:0:0:33:0%:63:1E0:36:33:16:17:35 0/0:0:0:0:0:28:0%:51:1E0:36:28:9:19:31 0/0:0:0:0:0:26:0%:47:1E0:35:26:11:15:27 0/0:0:0:0:0:27:0%:52:1E0:36:27:8:19:28 0/0:0:0:0:0:38:0%:70:1E0:35:38:13:25:38 0/0:0:0:0:0:32:0%:59:1E0:36:32:9:23:33 0/0:0:0:0:0:37:0%:70:1E0:36:37:15:22:39 0/0:0:0:0:0:20:0%:36:1E0:37:20:4:16:22 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:14 0/0:0:0:0:0:44:0%:81:1E0:37:44:16:28:45 0/0:0:0:0:0:29:0%:55:1E0:37:29:8:21:30 0/0:0:0:0:0:32:0%:59:1E0:36:32:11:21:33 0/0:0:0:0:0:45:0%:85:1E0:36:45:17:28:45 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:21 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:16 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:35 0/0:0:0:0:0:23:0%:44:1E0:36:23:8:15:24 0/0:0:0:0:0:22:0%:40:1E0:38:22:6:16:23 0/0:0:0:0:0:18:0%:32:1E0:35:18:4:14:18 0/0:0:0:0:0:33:0%:63:1E0:36:33:12:21:33 0/0:0:0:0:0:42:0%:77:1E0:36:42:15:27:42 0/0:0:0:0:0:28:0%:51:1E0:36:28:6:22:30 0/0:0:0:0:0:23:0%:44:1E0:36:23:6:17:23 MTB_anc 1339511 . G A . PASS AC=14;AF=0.047;AN=300;ANN=A|missense_variant|MODERATE|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.163G>A|p.Val55Met|163/1176|163/1176|55/391||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339511G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339511G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:40:43:34:9:43 0/0:0:0:0:0:13:0%:25:1E0:42:13:11:2:13 0/0:0:0:0:0:46:0%:85:1E0:39:46:23:23:46 0/0:0:0:0:0:15:0%:29:1E0:39:15:11:4:16 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:25:4:29 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:20:7:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:27:8:35 0/0:0:0:0:0:14:0%:25:1E0:41:14:8:6:14 0/0:0:0:0:0:36:0%:66:1E0:40:36:30:6:38 0/0:0:0:0:0:29:0%:55:1E0:39:29:24:5:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:26:6:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:30 0/0:0:0:0:0:18:0%:32:1E0:41:18:13:5:20 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:17:7:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:18:5:23 0/0:0:0:0:0:43:0%:82:1E0:41:43:31:12:43 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:31 0/0:0:0:0:0:32:0%:59:1E0:39:32:24:8:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:19 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:52:1:0:1:34:2.94%:51:5E-1:43:33:21:12:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:17:6:25 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:32 0/0:0:0:0:0:49:0%:93:1E0:44:49:32:17:50 0/0:0:0:0:0:27:0%:52:1E0:39:27:21:6:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:22:7:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:35 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:56:0%:99:1E0:42:56:39:17:56 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:43 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:28:0%:51:1E0:39:28:20:8:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:31 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:0:0:0:0:31:0%:59:1E0:39:31:22:9:32 0/0:0:0:0:0:18:0%:32:1E0:44:18:13:5:18 0/0:0:0:0:0:43:0%:82:1E0:39:43:27:16:43 0/0:0:0:0:0:25:0%:48:1E0:44:25:18:7:25 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:43 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:33 0/0:0:0:0:0:48:0%:89:1E0:45:48:33:15:50 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:40:0%:74:1E0:38:40:28:12:41 0/0:0:0:0:0:19:0%:37:1E0:46:19:14:5:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:19:6:25 0/0:0:0:0:0:17:0%:33:1E0:45:17:11:6:17 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:22:10:32 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:25 0/0:0:0:0:0:44:0%:81:1E0:41:44:27:17:45 0/0:0:0:0:0:44:0%:81:1E0:40:44:30:14:44 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:31:0%:59:1E0:39:31:23:8:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 1/1:40:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:13:12:1:14:92.86%:64:3.7391E-7:32:1:1:0:14 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:45:0%:85:1E0:44:45:27:18:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:15:4:19 0/0:0:0:0:0:31:0%:59:1E0:41:31:22:9:31 0/0:0:0:0:0:38:0%:70:1E0:38:38:27:11:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:21:10:33 0/0:0:0:0:0:32:0%:59:1E0:40:32:23:9:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:30 0/0:0:0:0:0:52:0%:96:1E0:39:52:35:17:52 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:35:0%:67:1E0:37:35:26:9:36 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 0/0:0:0:0:0:19:0%:37:1E0:39:19:13:6:19 0/0:0:0:0:0:36:0%:66:1E0:40:36:26:10:36 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:36:0%:66:1E0:42:36:29:7:38 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:44:0%:81:1E0:38:44:34:10:45 0/0:0:0:0:0:26:0%:47:1E0:38:26:19:7:26 0/0:0:0:0:0:45:0%:85:1E0:40:45:28:17:46 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:20:5:27 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:23:11:35 0/0:0:0:0:0:13:0%:25:1E0:40:13:8:5:13 0/0:0:0:0:0:42:0%:77:1E0:41:42:26:16:42 0/0:0:0:0:0:42:0%:77:1E0:38:42:29:13:43 0/0:0:0:0:0:19:0%:37:1E0:41:19:13:6:21 0/0:0:0:0:0:15:0%:29:1E0:40:15:10:5:17 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:23 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:40:34:29:5:34 0/0:0:0:0:0:33:0%:63:1E0:37:33:23:10:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:16:8:26 0/0:0:0:0:0:24:0%:44:1E0:36:24:17:7:25 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:34:0%:62:1E0:36:34:23:11:36 0/0:0:0:0:0:35:0%:67:1E0:37:35:27:8:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:24:7:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:24:6:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:29:9:38 0/0:0:0:0:0:37:0%:70:1E0:37:37:22:15:39 0/0:0:0:0:0:14:0%:25:1E0:45:14:9:5:15 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:36:0%:66:1E0:37:36:27:9:36 0/0:0:0:0:0:29:0%:55:1E0:37:29:21:8:30 0/0:0:0:0:0:32:0%:59:1E0:40:32:25:7:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:36 0/0:0:0:0:0:30:0%:55:1E0:37:30:19:11:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:17:5:22 0/0:0:0:0:0:40:0%:74:1E0:39:40:31:9:41 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:35 0/0:0:0:0:0:24:0%:44:1E0:37:24:17:7:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:26 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:35:0%:67:1E0:38:35:22:13:36 0/0:0:0:0:0:56:0%:99:1E0:37:56:33:23:57 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:22:9:31 0/0:0:0:0:0:40:0%:74:1E0:40:40:26:14:40 0/0:0:0:0:0:29:0%:55:1E0:37:29:25:4:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:28 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:25:11:36 0/0:0:0:0:0:26:0%:47:1E0:42:26:21:5:26 0/0:0:0:0:0:29:0%:55:1E0:39:29:22:7:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:27:14:41 0/0:0:0:0:0:59:0%:99:1E0:40:59:34:25:59 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 MTB_anc 1339512 . T C . PASS AC=14;AF=0.047;AN=300;ANN=C|missense_variant|MODERATE|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.164T>C|p.Val55Ala|164/1176|164/1176|55/391||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339512T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339512T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:40:43:34:9:43 0/0:0:0:0:0:13:0%:25:1E0:39:13:11:2:13 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:46 0/0:0:0:0:0:15:0%:29:1E0:39:15:11:4:16 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:24:4:29 0/0:0:0:0:0:20:0%:36:1E0:43:20:14:6:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:20:7:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:27:8:35 0/0:0:0:0:0:14:0%:25:1E0:41:14:8:6:14 0/0:0:0:0:0:37:0%:70:1E0:39:37:31:6:38 0/0:0:0:0:0:29:0%:55:1E0:38:29:24:5:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:29:5:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:30 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:20 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:19 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:18:5:23 0/0:0:0:0:0:42:0%:77:1E0:41:42:30:12:43 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:31 0/0:0:0:0:0:32:0%:59:1E0:38:32:24:8:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:26 0/0:0:0:0:0:18:0%:32:1E0:44:18:12:6:19 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:60:1:0:1:33:3.03%:52:5E-1:43:32:20:12:34 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:24 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:32 0/0:0:0:0:0:50:0%:92:1E0:43:50:33:17:50 0/0:0:0:0:0:28:0%:51:1E0:38:28:22:6:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:22:7:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:35 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:55:0%:99:1E0:41:55:39:16:56 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:44 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:38:28:20:8:28 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:31 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:0:0:0:0:30:0%:55:1E0:38:30:23:7:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:13:5:18 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:42 0/0:0:0:0:0:25:0%:48:1E0:42:25:18:7:25 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:42 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:33 0/0:0:0:0:0:49:0%:93:1E0:43:49:33:16:50 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 0/0:0:0:0:0:41:0%:78:1E0:38:41:29:12:44 0/0:0:0:0:0:19:0%:37:1E0:46:19:14:5:19 0/0:0:0:0:0:25:0%:48:1E0:41:25:19:6:25 0/0:0:0:0:0:17:0%:33:1E0:44:17:11:6:17 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:34 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:25 0/0:0:0:0:0:45:0%:85:1E0:39:45:28:17:46 0/0:0:0:0:0:44:0%:81:1E0:39:44:30:14:44 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:31:0%:59:1E0:38:31:23:8:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:13:12:1:14:92.86%:64:3.7391E-7:32:1:1:0:14 1/1:45:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:18:0%:32:1E0:43:18:6:12:19 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:20 0/0:0:0:0:0:44:0%:81:1E0:44:44:27:17:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:25 0/0:0:0:0:0:19:0%:37:1E0:44:19:15:4:19 0/0:0:0:0:0:31:0%:59:1E0:40:31:22:9:31 0/0:0:0:0:0:39:0%:74:1E0:37:39:28:11:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:23:10:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:23:9:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:30 0/0:0:0:0:0:52:0%:96:1E0:39:52:35:17:52 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:35:0%:67:1E0:36:35:25:10:35 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:18:0%:32:1E0:39:18:12:6:19 0/0:0:0:0:0:36:0%:66:1E0:40:36:26:10:36 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:20 0/0:0:0:0:0:35:0%:67:1E0:40:35:28:7:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:45:0%:85:1E0:38:45:34:11:46 0/0:0:0:0:0:26:0%:47:1E0:38:26:19:7:26 0/0:0:0:0:0:46:0%:85:1E0:39:46:29:17:46 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:26 0/0:0:0:0:0:19:0%:37:1E0:42:19:13:6:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:24:10:34 0/0:0:0:0:0:12:0%:21:1E0:40:12:8:4:12 0/0:0:0:0:0:42:0%:77:1E0:39:42:27:15:42 0/0:0:0:0:0:43:0%:82:1E0:36:43:30:13:43 0/0:0:0:0:0:20:0%:36:1E0:39:20:14:6:21 0/0:0:0:0:0:16:0%:29:1E0:39:16:11:5:17 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:23 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:23 0/0:0:0:0:0:32:0%:59:1E0:40:32:27:5:33 0/0:0:0:0:0:33:0%:63:1E0:37:33:23:10:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:28 0/0:0:0:0:0:26:0%:47:1E0:36:26:18:8:26 0/0:0:0:0:0:24:0%:44:1E0:36:24:18:6:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:28 0/0:0:0:0:0:32:0%:59:1E0:36:32:22:10:35 0/0:0:0:0:0:36:0%:66:1E0:36:36:28:8:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:23:7:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:23:6:30 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:28:9:38 0/0:0:0:0:0:38:0%:70:1E0:36:38:24:14:39 0/0:0:0:0:0:14:0%:25:1E0:43:14:9:5:15 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:35:0%:67:1E0:36:35:26:9:36 0/0:0:0:0:0:29:0%:55:1E0:36:29:21:8:30 0/0:0:0:0:0:33:0%:63:1E0:39:33:26:7:33 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:36 0/0:0:0:0:0:32:0%:59:1E0:36:32:21:11:33 0/0:0:0:0:0:23:0%:44:1E0:40:23:18:5:23 0/0:0:0:0:0:36:0%:66:1E0:39:36:27:9:40 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:23 0/0:0:0:0:0:33:0%:63:1E0:37:33:21:12:34 0/0:0:0:0:0:23:0%:44:1E0:37:23:16:7:24 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:36:0%:66:1E0:38:36:23:13:36 0/0:0:0:0:0:55:0%:99:1E0:37:55:33:22:57 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:31 0/0:0:0:0:0:39:0%:74:1E0:39:39:25:14:40 0/0:0:0:0:0:29:0%:55:1E0:37:29:26:3:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:27:0%:52:1E0:37:27:16:11:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:31 0/0:0:0:0:0:33:0%:63:1E0:38:33:23:10:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:22:5:27 0/0:0:0:0:0:27:0%:52:1E0:39:27:21:6:30 0/0:0:0:0:0:41:0%:78:1E0:41:41:27:14:41 0/0:0:0:0:0:57:0%:99:1E0:40:57:32:25:59 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 MTB_anc 1339516 . G A . PASS AC=14;AF=0.047;AN=300;ANN=A|synonymous_variant|LOW|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.168G>A|p.Gly56Gly|168/1176|168/1176|56/391||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339516G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339516G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:40:44:35:9:44 0/0:0:0:0:0:13:0%:25:1E0:40:13:11:2:13 0/0:0:0:0:0:46:0%:85:1E0:39:46:23:23:46 0/0:0:0:0:0:14:0%:25:1E0:40:14:11:3:14 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:25:4:29 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:20:7:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:28:8:36 0/0:0:0:0:0:14:0%:25:1E0:41:14:8:6:14 0/0:0:0:0:0:36:0%:66:1E0:40:36:30:6:38 0/0:0:0:0:0:26:0%:47:1E0:38:26:21:5:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:29:6:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:30 0/0:0:0:0:0:17:0%:33:1E0:41:17:13:4:18 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:17:7:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:18:5:23 0/0:0:0:0:0:42:0%:77:1E0:41:42:30:12:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:23:8:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:19 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:52:1:0:1:32:3.12%:48:5E-1:44:31:19:12:34 0/0:0:0:0:0:23:0%:44:1E0:42:23:17:6:25 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:32 0/0:0:0:0:0:50:0%:92:1E0:44:50:35:15:51 0/0:0:0:0:0:29:0%:55:1E0:38:29:23:6:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:22:6:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:23:12:35 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:21 0/0:0:0:0:0:52:0%:96:1E0:42:52:36:16:54 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:43 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:39:28:20:8:28 0/0:0:0:0:0:31:0%:59:1E0:39:31:20:11:31 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:18 0/0:0:0:0:0:31:0%:59:1E0:38:31:24:7:31 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:18 0/0:0:0:0:0:42:0%:77:1E0:38:42:27:15:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:18:6:24 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:41 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:33:16:49 0/0:0:0:0:0:22:0%:40:1E0:39:22:15:7:22 0/0:0:0:0:0:43:0%:82:1E0:39:43:31:12:44 0/0:0:0:0:0:19:0%:37:1E0:46:19:14:5:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:19:6:25 0/0:0:0:0:0:17:0%:33:1E0:43:17:11:6:17 0/0:0:0:0:0:29:0%:55:1E0:41:29:21:8:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:18:8:26 0/0:0:0:0:0:45:0%:85:1E0:40:45:30:15:45 0/0:0:0:0:0:43:0%:82:1E0:40:43:30:13:43 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:31:0%:59:1E0:38:31:23:8:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:13:12:1:14:92.86%:64:3.7391E-7:36:1:1:0:15 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:17:0%:33:1E0:42:17:6:11:18 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:19 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:25 0/0:0:0:0:0:21:0%:40:1E0:43:21:17:4:21 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:30 0/0:0:0:0:0:38:0%:70:1E0:36:38:28:10:38 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:22:10:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:23:7:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:30 0/0:0:0:0:0:49:0%:93:1E0:40:49:34:15:50 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:34:0%:62:1E0:36:34:25:9:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:21:11:32 0/0:0:0:0:0:19:0%:37:1E0:39:19:13:6:19 0/0:0:0:0:0:36:0%:66:1E0:41:36:27:9:37 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:31:6:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:44:0%:81:1E0:38:44:34:10:46 0/0:0:0:0:0:25:0%:48:1E0:38:25:19:6:25 0/0:0:0:0:0:45:0%:85:1E0:39:45:29:16:46 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:20:5:25 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:33:0%:63:1E0:41:33:23:10:34 0/0:0:0:0:0:12:0%:21:1E0:40:12:8:4:12 0/0:0:0:0:0:41:0%:78:1E0:39:41:27:14:41 0/0:0:0:0:0:40:0%:74:1E0:37:40:29:11:41 0/0:0:0:0:0:21:0%:40:1E0:40:21:15:6:21 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:17 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:24 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:27:5:32 0/0:0:0:0:0:33:0%:63:1E0:37:33:23:10:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:18:8:26 0/0:0:0:0:0:25:0%:48:1E0:36:25:18:7:25 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:34:0%:62:1E0:36:34:23:11:35 0/0:0:0:0:0:37:0%:70:1E0:37:37:29:8:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:25:7:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:24:6:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:40:0%:74:1E0:40:40:31:9:40 0/0:0:0:0:0:38:0%:70:1E0:37:38:24:14:38 0/0:0:0:0:0:14:0%:25:1E0:44:14:9:5:15 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:36:0%:66:1E0:37:36:27:9:36 0/0:0:0:0:0:28:0%:51:1E0:37:28:20:8:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:24:7:33 0/0:0:0:0:0:34:0%:62:1E0:38:34:21:13:34 0/0:0:0:0:0:33:0%:63:1E0:36:33:22:11:33 0/0:0:0:0:0:25:0%:48:1E0:40:25:20:5:25 0/0:0:0:0:0:39:0%:74:1E0:39:39:30:9:40 0/0:0:0:0:0:21:0%:40:1E0:40:21:15:6:22 0/0:0:0:0:0:33:0%:63:1E0:38:33:22:11:33 0/0:0:0:0:0:22:0%:40:1E0:36:22:16:6:23 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:23 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:33:0%:63:1E0:38:33:22:11:34 0/0:0:0:0:0:56:0%:99:1E0:37:56:35:21:57 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:22:9:31 0/0:0:0:0:0:39:0%:74:1E0:40:39:25:14:39 0/0:0:0:0:0:30:0%:55:1E0:38:30:26:4:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:18:9:27 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:27:9:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:22:5:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:21:6:28 0/0:0:0:0:0:41:0%:78:1E0:42:41:27:14:41 0/0:0:0:0:0:58:0%:99:1E0:41:58:34:24:59 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 MTB_anc 1339548 . T C . PASS AC=1;AF=3.356e-03;AN=298;ANN=C|missense_variant|MODERATE|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.200T>C|p.Val67Ala|200/1176|200/1176|67/391||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339548T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339548T>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:27:0%:52:1E0:36:27:18:9:32 0/0:0:0:0:0:10:0%:17:1E0:38:10:8:2:11 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:34 0/0:0:0:0:0:8:0%:14:1E0:35:8:7:1:11 0/0:0:0:0:0:18:0%:32:1E0:35:18:9:9:21 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:18:3:27 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:16 0/0:0:0:0:0:17:0%:33:1E0:37:17:14:3:19 0/0:0:0:0:0:17:0%:33:1E0:42:17:10:7:18 0/0:0:0:0:0:15:0%:29:1E0:35:15:11:4:17 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:25 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:13 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:30 0/0:0:0:0:0:12:0%:21:1E0:33:12:10:2:15 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:21 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:24 0/0:0:0:0:0:12:0%:21:1E0:38:12:9:3:13 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:17 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:22 0/0:0:0:0:0:11:0%:22:1E0:32:11:9:2:17 0/0:0:0:0:0:24:0%:44:1E0:36:24:16:8:33 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:26 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:27 0/0:0:0:0:0:14:0%:25:1E0:34:14:11:3:23 0/0:0:0:0:0:17:0%:33:1E0:37:17:11:6:19 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:18 0/0:34:1:1:0:17:5.88%:24:5E-1:44:16:7:9:19 0/0:0:0:0:0:26:0%:47:1E0:36:26:15:11:32 0/0:0:0:0:0:17:0%:33:1E0:36:17:10:7:20 0/0:0:0:0:0:18:0%:32:1E0:35:18:7:11:23 0/0:0:0:0:0:26:0%:47:1E0:36:26:15:11:29 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:42 0/0:0:0:0:0:17:0%:33:1E0:36:17:12:5:21 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:25 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:26 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:18 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:43 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:31 0/0:0:0:0:0:18:0%:32:1E0:35:18:9:9:27 0/0:0:0:0:0:20:0%:36:1E0:35:20:12:8:25 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:17 0/0:0:0:0:0:19:0%:37:1E0:37:19:14:5:25 0/0:0:0:0:0:11:0%:22:1E0:38:11:7:4:15 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:32 0/0:0:0:0:0:16:0%:29:1E0:40:16:12:4:19 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:27 0/0:37:1:1:0:23:4.35%:34:5E-1:35:22:10:12:26 0/0:0:0:0:0:35:0%:67:1E0:39:35:24:11:42 0/0:0:0:0:0:14:0%:25:1E0:36:14:8:6:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:17:11:34 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:23 0/0:0:0:0:0:14:0%:25:1E0:40:14:9:5:20 0/0:0:0:0:0:9:0%:18:1E0:33:9:4:5:13 0/0:0:0:0:0:18:0%:32:1E0:40:18:13:5:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:30 0/0:0:0:0:0:13:0%:25:1E0:34:13:7:6:15 0/0:38:1:1:0:24:4.17%:34:5E-1:37:23:14:9:33 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:36 0/0:0:0:0:0:16:0%:29:1E0:37:16:11:5:22 0/0:0:0:0:0:20:0%:36:1E0:34:20:14:6:27 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:25 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:9 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:21 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:30 0/0:0:0:0:0:9:0%:18:1E0:37:9:8:1:10 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:27 0/0:0:0:0:0:7:0%:14:1E0:34:7:1:6:11 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:17 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:32 0/0:0:0:0:0:12:0%:21:1E0:41:12:6:6:15 0/0:0:0:0:0:15:0%:29:1E0:35:15:11:4:20 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:24 0/0:0:0:0:0:20:0%:36:1E0:35:20:11:9:29 0/0:0:0:0:0:23:0%:44:1E0:36:23:15:8:27 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:26 0/0:0:0:0:0:20:0%:36:1E0:33:20:14:6:25 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:23 0/0:0:0:0:0:17:0%:33:1E0:36:17:13:4:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:27 0/0:0:0:0:0:32:0%:59:1E0:35:32:21:11:43 0/0:0:0:0:0:27:0%:52:1E0:37:27:9:18:33 0/0:0:0:0:0:15:0%:29:1E0:35:15:8:7:20 0/0:0:0:0:0:14:0%:25:1E0:33:14:8:6:25 0/0:34:1:1:0:23:4.35%:34:5E-1:35:22:10:12:27 0/0:0:0:0:0:21:0%:40:1E0:35:21:11:10:28 0/0:0:0:0:0:13:0%:25:1E0:32:13:9:4:13 0/0:0:0:0:0:18:0%:32:1E0:36:18:10:8:25 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:13 0/0:0:0:0:0:20:0%:36:1E0:37:20:14:6:31 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:24 0/0:0:0:0:0:31:0%:59:1E0:37:31:20:11:37 0/0:37:3:3:0:16:18.75%:11:1.129E-1:36:13:9:4:20 0/0:0:0:0:0:26:0%:47:1E0:35:26:12:14:36 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:19 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:16 0/0:0:0:0:0:16:0%:29:1E0:37:16:11:5:18 0/0:30:1:1:0:18:5.56%:24:5E-1:35:17:8:9:25 0/0:0:0:0:0:24:0%:44:1E0:37:24:16:8:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:24:0%:44:1E0:36:24:15:9:29 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:28 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:12 0/0:38:1:0:1:10:10%:11:5E-1:34:9:5:4:10 0/0:0:0:0:0:13:0%:25:1E0:34:13:8:5:15 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:23 0/0:0:0:0:0:16:0%:29:1E0:34:16:11:5:24 0/0:0:0:0:0:22:0%:40:1E0:35:22:14:8:25 0/0:0:0:0:0:19:0%:37:1E0:37:19:12:7:24 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:21 0/0:0:0:0:0:17:0%:33:1E0:35:17:9:8:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:18 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:20 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:24 0/0:0:0:0:0:21:0%:40:1E0:36:21:14:7:25 0/0:0:0:0:0:13:0%:25:1E0:41:13:9:4:20 0/0:0:0:0:0:19:0%:37:1E0:34:19:9:10:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:33 0/0:0:0:0:0:25:0%:48:1E0:34:25:11:14:29 0/0:0:0:0:0:11:0%:22:1E0:37:11:6:5:14 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:20 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:20 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:16 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:22 0/0:0:0:0:0:22:0%:40:1E0:35:22:13:9:27 0/0:0:0:0:0:18:0%:32:1E0:33:18:9:9:24 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:17 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:30 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:18 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:29 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:13 0/0:0:0:0:0:12:0%:21:1E0:37:12:5:7:16 0/0:0:0:0:0:14:0%:25:1E0:34:14:5:9:15 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:21 0/0:0:0:0:0:31:0%:59:1E0:35:31:11:20:45 0/0:0:0:0:0:15:0%:29:1E0:42:15:5:10:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:26 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:28 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:17 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:27 0/0:0:0:0:0:17:0%:33:1E0:34:17:9:8:23 0/1:38:8:4:4:22:36.36%:27:1.8042E-3:34:14:6:8:26 0/0:0:0:0:0:22:0%:40:1E0:36:22:15:7:27 0/0:0:0:0:0:17:0%:33:1E0:34:17:12:5:20 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:22 0/0:0:0:0:0:32:0%:59:1E0:36:32:18:14:36 0/0:0:0:0:0:33:0%:63:1E0:37:33:13:20:39 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:20 MTB_anc 1339713 . T C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.365T>C|p.Ile122Thr|365/1176|365/1176|122/391||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339713T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339713T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:38:52:21:31:52 0/0:0:0:0:0:15:0%:29:1E0:42:15:4:11:16 0/0:0:0:0:0:44:0%:81:1E0:43:44:15:29:44 0/0:0:0:0:0:26:0%:47:1E0:39:26:5:21:27 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:23 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:10:26:36 0/0:0:0:0:0:22:0%:40:1E0:39:22:8:14:23 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:13:0%:25:1E0:40:13:4:9:13 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:39:0%:74:1E0:40:39:11:28:39 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:36 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:26 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:20 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:17 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:27 0/0:0:0:0:0:42:0%:77:1E0:41:42:15:27:42 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:27 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:40 0/0:0:0:0:0:13:0%:25:1E0:44:13:6:7:13 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:32 0/0:0:0:0:0:33:0%:63:1E0:39:33:11:22:33 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:25 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:11:20:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:55:0%:99:1E0:42:55:15:40:55 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:38 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:11:30:41 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:27 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:16 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:39:33:11:22:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:49:0%:93:1E0:39:49:22:27:50 0/0:0:0:0:0:39:0%:74:1E0:40:39:14:25:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:41 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:41:0%:78:1E0:40:41:13:28:41 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:11:20:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:38 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:37 0/0:0:0:0:0:45:0%:85:1E0:41:45:17:28:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:41 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:48:0%:89:1E0:40:48:19:29:49 0/0:0:0:0:0:26:0%:47:1E0:41:26:6:20:26 0/0:0:0:0:0:48:0%:89:1E0:42:48:16:32:48 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:12:0%:21:1E0:41:12:4:8:12 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:17:0%:33:1E0:40:17:4:13:17 0/0:0:0:0:0:18:0%:32:1E0:44:18:5:13:18 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:48 0/0:0:0:0:0:24:0%:44:1E0:39:24:6:18:25 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:27:0%:52:1E0:38:27:6:21:27 0/0:0:0:0:0:30:0%:55:1E0:39:30:8:22:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:50:0%:92:1E0:38:50:15:35:50 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:18:0%:32:1E0:44:18:3:15:18 0/0:0:0:0:0:39:0%:74:1E0:38:39:16:23:39 0/0:0:0:0:0:31:0%:59:1E0:37:31:12:19:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:29 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:19:0%:37:1E0:41:19:2:17:19 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:19 0/0:0:0:0:0:34:0%:62:1E0:41:34:9:25:34 0/0:0:0:0:0:21:0%:40:1E0:43:21:5:16:21 0/0:0:0:0:0:49:0%:93:1E0:37:49:17:32:51 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:32 0/0:0:0:0:0:42:0%:77:1E0:41:42:13:29:42 0/0:0:0:0:0:29:0%:55:1E0:39:29:9:20:30 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:6:16:22 0/0:0:0:0:0:27:0%:52:1E0:37:27:7:20:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:8:21:31 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:18 0/0:0:0:0:0:43:0%:82:1E0:39:43:15:28:43 0/0:0:0:0:0:39:0%:74:1E0:37:39:14:25:40 0/0:0:0:0:0:17:0%:33:1E0:39:17:5:12:17 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:20 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:23 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:22 0/0:0:0:0:0:37:0%:70:1E0:39:37:11:26:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:20 0/0:0:0:0:0:28:0%:51:1E0:39:28:8:20:28 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:17:0%:33:1E0:42:17:4:13:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:38:33:12:21:33 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:10:21:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:6:22:28 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:20 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:42 0/0:0:0:0:0:60:0%:99:1E0:41:60:26:34:61 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:27 0/0:0:0:0:0:39:0%:74:1E0:36:39:15:24:41 0/0:60:1:1:0:24:4.17%:34:5E-1:36:23:7:16:25 0/0:0:0:0:0:37:0%:70:1E0:39:37:13:24:37 0/0:0:0:0:0:33:0%:63:1E0:36:33:15:18:34 0/0:0:0:0:0:34:0%:62:1E0:37:34:9:25:34 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:37 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:22 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:28 0/0:0:0:0:0:17:0%:33:1E0:41:17:5:12:17 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:47:0%:89:1E0:37:47:21:26:47 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:38:26:7:19:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:24 0/0:0:0:0:0:39:0%:74:1E0:43:39:11:28:40 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/1:48:10:4:6:25:40%:34:3.1821E-4:39:15:5:10:25 0/0:0:0:0:0:30:0%:55:1E0:40:30:8:22:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:17 0/0:0:0:0:0:41:0%:78:1E0:39:41:14:27:42 0/0:0:0:0:0:52:0%:96:1E0:41:52:18:34:55 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 MTB_anc 1339714 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|synonymous_variant|LOW|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.366A>C|p.Ile122Ile|366/1176|366/1176|122/391||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339714A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339714A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:37:53:21:32:53 0/0:0:0:0:0:16:0%:29:1E0:43:16:5:11:16 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:43 0/0:0:0:0:0:25:0%:48:1E0:40:25:5:20:26 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:10:26:36 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:11:0%:22:1E0:41:11:3:8:12 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:18 0/0:0:0:0:0:39:0%:74:1E0:39:39:11:28:39 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:36 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:26 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:19 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:17 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:14:27:42 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:8:20:28 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:40 0/0:0:0:0:0:13:0%:25:1E0:44:13:6:7:13 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:32 0/0:0:0:0:0:33:0%:63:1E0:39:33:11:22:33 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:25 0/0:39:1:1:0:24:4.17%:34:5E-1:40:23:8:15:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:11:20:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:55:0%:99:1E0:42:55:15:40:55 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:38 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 0/0:0:0:0:0:41:0%:78:1E0:39:41:11:30:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:27 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:16 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:48:0%:89:1E0:40:48:22:26:50 0/0:0:0:0:0:41:0%:78:1E0:40:41:15:26:41 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:42 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:40:0%:74:1E0:40:40:13:27:41 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:37 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:45 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:40 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:17 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:47:0%:89:1E0:40:47:20:27:48 0/0:0:0:0:0:25:0%:48:1E0:42:25:6:19:26 0/0:0:0:0:0:48:0%:89:1E0:41:48:16:32:48 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:11:0%:22:1E0:43:11:4:7:11 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:17:0%:33:1E0:39:17:4:13:17 0/0:0:0:0:0:18:0%:32:1E0:46:18:5:13:18 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:48 0/0:0:0:0:0:26:0%:47:1E0:39:26:7:19:26 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:10:21:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:6:20:27 0/0:0:0:0:0:30:0%:55:1E0:39:30:8:22:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:29 0/0:0:0:0:0:49:0%:93:1E0:39:49:14:35:50 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:31 0/0:0:0:0:0:18:0%:32:1E0:44:18:3:15:18 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:39 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:18:0%:32:1E0:42:18:1:17:19 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:34:0%:62:1E0:41:34:9:25:34 0/0:0:0:0:0:21:0%:40:1E0:43:21:6:15:22 0/0:0:0:0:0:49:0%:93:1E0:38:49:17:32:51 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:13:28:41 0/0:0:0:0:0:30:0%:55:1E0:39:30:9:21:30 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:6:16:22 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:9:23:32 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:42 0/0:0:0:0:0:38:0%:70:1E0:37:38:13:25:39 0/0:0:0:0:0:16:0%:29:1E0:39:16:5:11:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:20 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:22 0/0:0:0:0:0:37:0%:70:1E0:39:37:11:26:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:33 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:21 0/0:0:0:0:0:27:0%:52:1E0:39:27:7:20:28 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:19:0%:37:1E0:42:19:4:15:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:38:33:11:22:34 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:6:22:28 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:20 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:43 0/0:37:1:1:0:60:1.67%:98:5E-1:41:59:27:32:61 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:27 0/0:0:0:0:0:39:0%:74:1E0:37:39:15:24:40 0/0:0:0:0:0:24:0%:44:1E0:36:24:8:16:25 0/0:0:0:0:0:37:0%:70:1E0:39:37:13:24:37 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:35 0/0:0:0:0:0:32:0%:59:1E0:38:32:8:24:33 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:37 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:15:0%:29:1E0:42:15:3:12:17 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:18 0/0:0:0:0:0:47:0%:89:1E0:37:47:21:26:47 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:26:0%:47:1E0:38:26:7:19:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:24 0/0:0:0:0:0:40:0%:74:1E0:43:40:11:29:41 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/1:50:9:4:5:24:37.5%:31:7.7962E-4:40:15:5:10:24 0/0:0:0:0:0:30:0%:55:1E0:40:30:8:22:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:17:0%:33:1E0:42:17:6:11:17 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:42 0/0:0:0:0:0:54:0%:99:1E0:41:54:18:36:55 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 MTB_anc 1339741 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.393C>G|p.Thr131Thr|393/1176|393/1176|131/391||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339741C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339741C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:49:16:33:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:30:10:20:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:30:14:16:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:20:12:8:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:32:19:13:33:96.97%:99:4.7095E-18:38:1:0:1:34 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 1339774 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.426C>G|p.Gly142Gly|426/1176|426/1176|142/391||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339774C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339774C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:51:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:42:20:22:43:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:12:4:8:13:92.31%:64:3.698E-7:0:0:0:0:13 1/1:43:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:59:22:37:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:17:14:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:28:12:16:29:96.55%:99:9.9776E-16:37:1:0:1:30 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:41:19:22:43:95.35%:99:2.5612E-23:39:1:0:1:44 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:42:19:23:43:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:35:21:14:36:97.22%:99:8.3613E-20:39:1:0:1:36 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:52:26:26:53:98.11%:99:6.3169E-31:0:0:0:0:55 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 1339894 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|synonymous_variant|LOW|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.546C>T|p.Leu182Leu|546/1176|546/1176|182/391||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339894C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339894C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:44:49:24:25:49 0/0:0:0:0:0:18:0%:32:1E0:54:18:6:12:18 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:43 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:17:0%:33:1E0:47:17:6:11:17 0/0:0:0:0:0:37:0%:70:1E0:39:37:12:25:37 0/0:0:0:0:0:19:0%:37:1E0:51:19:9:10:20 0/0:0:0:0:0:48:0%:89:1E0:45:48:26:22:48 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:33:0%:63:1E0:49:33:13:20:33 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:44 0/0:0:0:0:0:21:0%:40:1E0:49:21:6:15:21 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:33 0/0:0:0:0:0:50:0%:92:1E0:46:50:27:23:50 0/0:33:1:1:0:32:3.12%:48:5E-1:48:31:13:18:33 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:44 0/0:37:1:0:1:33:3.03%:52:5E-1:43:32:8:24:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:33 0/0:0:0:0:0:47:0%:89:1E0:45:47:19:28:47 0/0:0:0:0:0:40:0%:74:1E0:48:40:25:15:40 0/0:0:0:0:0:60:0%:99:1E0:44:60:30:30:61 0/0:0:0:0:0:54:0%:99:1E0:42:54:28:26:54 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:37 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:43:0%:82:1E0:47:43:23:20:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:51 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:46 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:30 0/0:32:1:1:0:46:2.17%:73:5E-1:44:45:20:25:46 0/0:0:0:0:0:44:0%:81:1E0:47:44:19:25:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:26:15:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:37 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:52:0%:96:1E0:45:52:27:25:53 0/0:0:0:0:0:28:0%:51:1E0:49:28:11:17:28 0/0:0:0:0:0:69:0%:99:1E0:46:69:23:46:72 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:17:0%:33:1E0:48:17:6:11:17 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:41 0/0:0:0:0:0:31:0%:59:1E0:51:31:12:19:31 0/0:0:0:0:0:23:0%:44:1E0:53:23:10:13:23 0/0:0:0:0:0:34:0%:62:1E0:50:34:15:19:34 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:54 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:33:1:1:0:38:2.63%:58:5E-1:47:37:21:16:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:31 0/0:0:0:0:0:63:0%:99:1E0:44:63:24:39:63 0/0:0:0:0:0:32:0%:59:1E0:45:32:11:21:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:30 0/0:0:0:0:0:16:0%:29:1E0:50:16:7:9:16 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:31 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:29 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:20 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:43 0/0:0:0:0:0:28:0%:51:1E0:44:28:8:20:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:25 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:13:30:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:32:0%:59:1E0:48:32:22:10:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:38 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:42 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:20 0/0:60:1:0:1:30:3.33%:44:5E-1:42:29:14:15:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:48 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:31 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:58:0%:99:1E0:42:58:28:30:58 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:28 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:32 0/0:0:0:0:0:37:0%:70:1E0:40:37:13:24:38 0/0:0:0:0:0:43:0%:82:1E0:38:43:23:20:44 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:40 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:41 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:31 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:43 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/1:44:14:8:6:45:31.11%:47:1.7873E-5:44:30:13:17:46 0/0:0:0:0:0:28:0%:51:1E0:40:28:7:21:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:52:0%:96:1E0:45:52:21:31:52 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 MTB_anc 1339905 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.557C>T|p.Ala186Val|557/1176|557/1176|186/391||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1339905C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1339905C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:53 0/0:60:1:1:0:18:5.56%:24:5E-1:54:17:6:11:18 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:60:1:1:0:30:3.33%:44:5E-1:45:29:16:13:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:32 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:16:0%:29:1E0:48:16:5:11:19 0/0:0:0:0:0:36:0%:66:1E0:38:36:14:22:36 0/0:0:0:0:0:18:0%:32:1E0:51:18:8:10:19 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:51 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:33:0%:63:1E0:49:33:12:21:34 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:45 0/0:0:0:0:0:21:0%:40:1E0:48:21:6:15:21 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:39 0/0:60:1:1:0:39:2.56%:62:5E-1:42:38:20:18:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:38:1:0:1:20:5%:27:5E-1:45:19:10:9:21 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:47:30:22:8:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:23:11:35 0/0:0:0:0:0:51:0%:97:1E0:46:51:27:24:51 0/0:0:0:0:0:31:0%:59:1E0:49:31:12:19:33 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:42 0/0:37:1:0:1:33:3.03%:52:5E-1:42:32:7:25:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:37:1:1:0:27:3.7%:41:5E-1:44:26:15:11:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:31:1:0:1:48:2.08%:76:5E-1:45:47:19:28:48 0/0:47:1:0:1:39:2.56%:62:5E-1:48:38:24:14:40 0/0:0:0:0:0:58:0%:99:1E0:43:58:28:30:59 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:54 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:40 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:43 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:42 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:30 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:55 0/0:0:0:0:0:47:0%:89:1E0:41:47:20:27:48 0/0:60:1:0:1:28:3.57%:41:5E-1:46:27:12:15:31 0/0:36:1:1:0:45:2.22%:73:5E-1:45:44:20:24:46 0/0:0:0:0:0:44:0%:81:1E0:48:44:19:25:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:25:12:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:41 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:36 0/0:60:1:1:0:50:2%:80:5E-1:45:49:24:25:55 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:28 0/0:0:0:0:0:69:0%:99:1E0:45:69:24:45:70 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:17:0%:33:1E0:46:17:6:11:17 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:42 0/0:0:0:0:0:32:0%:59:1E0:50:32:14:18:32 0/0:0:0:0:0:23:0%:44:1E0:51:23:10:13:24 0/0:0:0:0:0:37:0%:70:1E0:49:37:17:20:38 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:53 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:37 0/0:0:0:0:0:36:0%:66:1E0:48:36:21:15:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:31 0/0:0:0:0:0:66:0%:99:1E0:42:66:25:41:66 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:28 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:43 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:31 0/0:0:0:0:0:15:0%:29:1E0:51:15:6:9:16 0/0:0:0:0:0:30:0%:55:1E0:49:30:12:18:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:28 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:23 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:48 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:9:19:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:33 0/0:31:1:0:1:27:3.7%:41:5E-1:42:26:13:13:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:44 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:35 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:31:0%:59:1E0:48:31:21:10:34 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:6:20:29 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:43 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:19 0/0:60:1:0:1:31:3.23%:48:5E-1:40:30:14:16:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:26 0/0:0:0:0:0:49:0%:93:1E0:38:49:24:25:49 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:23 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:23 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:43 0/0:0:0:0:0:54:0%:99:1E0:42:54:24:30:54 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:30 0/0:0:0:0:0:37:0%:70:1E0:37:37:20:17:43 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:31 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:37 0/0:0:0:0:0:40:0%:74:1E0:38:40:22:18:44 0/0:0:0:0:0:33:0%:59:1E0:40:32:16:16:39 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:37 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:41 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:39 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:31 0/0:0:0:0:0:42:0%:77:1E0:38:42:20:22:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:44 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:28 0/1:40:13:7:6:45:28.89%:43:4.4424E-5:43:32:15:17:45 0/0:0:0:0:0:27:0%:52:1E0:40:27:7:20:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:54:0%:99:1E0:44:54:21:33:55 0/0:35:1:1:0:34:2.94%:51:5E-1:41:33:15:18:34 MTB_anc 1340052 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|PPE18_Rv1196|gene1219|transcript|Transcript_gene1219|Coding|1/1|c.704T>G|p.Leu235Arg|704/1176|704/1176|235/391||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1340052T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1340052T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:14:7:7:15:93.33%:69:1.0315E-7:60:1:0:1:15 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:30:13:17:33:90.91%:99:9.89E-16:51:3:2:1:33 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:32:18:14:33:96.97%:99:4.7095E-18:60:1:1:0:34 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:29:20:9:30:96.67%:99:2.6212E-16:49:1:0:1:32 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:24:13:11:25:96%:99:2.0568E-13:60:1:0:1:26 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:40:19:21:41:97.56%:99:9.8874E-23:60:1:1:0:42 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:43:22:21:44:97.73%:99:1.7144E-24:60:1:1:0:45 1/1:50:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:51:15:4:11:16:93.75%:75:2.8282E-8:60:1:1:0:16 1/1:46:29:16:13:32:93.55%:99:1.1344E-15:60:2:1:1:32 1/1:41:25:9:16:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:41:44:19:25:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:41:20:21:42:97.62%:99:2.5612E-23:60:1:1:0:42 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:35:9:26:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:28:11:17:29:96.55%:99:9.9776E-16:49:1:1:0:29 1/1:47:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:52:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:38:14:24:39:97.44%:99:1.4697E-21:60:1:0:1:39 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:27:9:18:28:96.43%:99:3.7915E-15:32:1:0:1:28 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:64:27:37:65:98.46%:99:6.9424E-37:34:1:0:1:65 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:35:18:17:37:94.59%:99:4.2437E-19:49:2:2:0:37 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:64:30:34:65:98.46%:99:6.9424E-37:33:1:0:1:65 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:31:12:19:33:93.94%:99:1.8007E-17:60:1:0:1:34 1/1:44:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:15:14:30:96.67%:99:2.6212E-16:38:1:1:0:30 1/1:44:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:19:9:10:21:90.48%:93:4.7003E-10:35:2:2:0:21 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:52:26:26:53:98.11%:99:6.3169E-31:0:0:0:0:53 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:9:10:21:90.48%:93:4.7003E-10:58:2:1:1:22 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:29:18:11:31:93.55%:99:1.1344E-15:35:2:1:1:31 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:33:18:15:35:94.29%:99:5.9366E-18:60:2:1:1:36 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:33:16:17:34:97.06%:99:1.2301E-18:39:1:1:0:35 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:25:9:16:26:96.15%:99:5.4444E-14:39:1:1:0:26 1/1:45:20:8:12:21:95.24%:99:4.0873E-11:35:1:0:1:21 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:52 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:36:18:18:37:97.3%:99:2.1762E-20:38:1:1:0:38 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:37:19:18:38:97.37%:99:5.6582E-21:60:1:1:0:40 1/1:39:65:37:28:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:35:20:15:36:97.22%:99:8.3613E-20:60:1:0:1:37 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:52:23:29:53:98.11%:99:8.609E-30:60:1:0:1:53 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 1341023 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|esxL_Rv1198|gene1221|transcript|Transcript_gene1221|Coding|1/1|c.18A>G|p.Gln6Gln|18/285|18/285|6/94||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1341023A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1341023A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:24:12:12:25:96%:99:2.0568E-13:39:1:0:1:26 1/1:50:17:10:7:18:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:15:9:6:16:93.75%:75:2.8282E-8:60:1:1:0:16 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:19:22:42:97.62%:99:2.5612E-23:53:1:0:1:43 1/1:44:21:10:11:22:95.45%:99:1.0931E-11:36:1:0:1:22 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:30:15:15:32:93.75%:99:3.0612E-16:48:2:0:2:32 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:19:8:11:20:95%:98:1.5234E-10:60:1:0:1:21 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:12:12:25:96%:99:2.0568E-13:27:1:0:1:25 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:22:11:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:28:16:12:29:96.55%:99:9.9776E-16:39:1:1:0:29 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:19:21:41:97.56%:99:9.8874E-23:60:1:0:1:41 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:12:12:25:96%:99:2.0568E-13:36:1:0:1:26 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:40:39:18:21:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:40:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:38:20:18:39:97.44%:99:1.4697E-21:36:1:0:1:40 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:13:13:27:96.3%:99:1.4382E-14:36:1:1:0:28 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 1341029 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|esxL_Rv1198|gene1221|transcript|Transcript_gene1221|Coding|1/1|c.24G>T|p.Gly8Gly|24/285|24/285|8/94||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1341029G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1341029G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:24:12:12:25:96%:99:2.0568E-13:38:1:0:1:26 1/1:51:17:10:7:18:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:14:8:6:15:93.33%:69:1.0315E-7:60:1:1:0:16 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:44:21:23:45:97.78%:99:4.4304E-25:46:1:0:1:45 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:31:15:16:33:93.94%:99:8.2416E-17:49:2:0:2:33 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:23:9:14:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:32:21:11:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:27:15:12:28:96.43%:99:3.7915E-15:38:1:1:0:30 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:41:20:21:42:97.62%:99:2.5612E-23:60:1:0:1:42 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:9:16:26:96.15%:99:5.4444E-14:34:1:0:1:28 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:48:29:19:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:42:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 MTB_anc 1341040 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|esxL_Rv1198|gene1221|transcript|Transcript_gene1221|Coding|1/1|c.35A>C|p.Asp12Ala|35/285|35/285|12/94||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1341040A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1341040A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:53:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:16:19:36:97.22%:99:8.3613E-20:30:1:0:1:37 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:44:27:17:45:97.78%:99:3.8097E-26:0:0:0:0:46 1/1:46:26:13:13:27:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:53:30:16:14:32:93.75%:99:3.0612E-16:36:2:1:1:32 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:37:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 1341044 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|esxL_Rv1198|gene1221|transcript|Transcript_gene1221|Coding|1/1|c.39T>C|p.His13His|39/285|39/285|13/94||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1341044T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1341044T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:53:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:34:16:18:37:91.89%:99:5.6582E-18:49:3:1:2:38 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:24:15:9:25:96%:99:2.0568E-13:37:1:0:1:25 1/1:49:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:18:11:7:19:94.74%:92:5.6585E-10:60:1:0:1:19 1/1:46:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:57:31:26:58:98.28%:99:9.6072E-33:60:1:1:0:58 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:10:15:26:96.15%:99:5.4444E-14:39:1:1:0:26 1/1:44:45:21:24:46:97.83%:99:1.1441E-25:60:1:0:1:46 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:19:9:10:20:95%:98:1.5234E-10:39:1:1:0:20 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:28:16:12:29:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:46:17:6:11:18:94.44%:86:2.0936E-9:37:1:0:1:18 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:26:11:15:28:92.86%:99:5.6872E-14:36:2:1:1:29 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:11:5:6:12:91.67%:53:4.8074E-6:60:1:1:0:12 1/1:44:34:17:17:36:94.44%:99:1.5887E-18:49:2:0:2:36 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:35:20:15:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:11:15:28:92.86%:99:5.6872E-14:48:2:1:1:28 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:41:24:17:42:97.62%:99:2.5612E-23:38:1:0:1:42 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:11:14:26:96.15%:99:5.4444E-14:60:1:1:0:28 1/1:45:38:20:18:39:97.44%:99:1.4697E-21:38:1:0:1:40 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:22:9:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:30:14:16:31:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:26:15:11:28:92.86%:99:5.6872E-14:34:2:1:1:28 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:40:12:28:41:97.56%:99:9.8874E-23:60:1:1:0:41 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:14:15:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:40:18:22:41:97.56%:99:9.8874E-23:60:1:1:0:42 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:33:17:16:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:16:13:30:96.67%:99:2.6212E-16:38:1:0:1:30 1/1:42:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:46:30:16:47:97.87%:99:2.9526E-26:39:1:1:0:47 1/1:38:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 1341102 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|esxL_Rv1198|gene1221|transcript|Transcript_gene1221|Coding|1/1|c.97C>T|p.Arg33Cys|97/285|97/285|33/94||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1341102C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1341102C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:1:0:47:2.13%:77:5E-1:43:46:21:25:47 0/0:0:0:0:0:14:0%:25:1E0:49:14:7:7:14 0/0:0:0:0:0:43:0%:82:1E0:49:43:27:16:44 0/0:38:1:0:1:34:2.94%:51:5E-1:51:33:18:15:36 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:38:0%:70:1E0:52:38:22:16:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:60:2:0:2:45:4.44%:64:2.4719E-1:49:43:20:23:45 0/0:0:0:0:0:30:0%:55:1E0:51:30:21:9:30 0/0:0:0:0:0:38:0%:70:1E0:49:38:19:19:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:19 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:43 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:47:24:6:18:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 0/0:0:0:0:0:54:0%:99:1E0:47:54:31:23:54 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:39:1:0:1:23:4.35%:34:5E-1:46:22:12:10:23 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:60:1:1:0:18:5.56%:24:5E-1:49:17:10:7:18 0/0:39:1:0:1:33:3.03%:52:5E-1:42:32:20:12:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:31 0/0:0:0:0:0:47:0%:89:1E0:47:47:28:19:47 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:36:0%:66:1E0:48:36:14:22:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:28 0/0:0:0:0:0:66:0%:99:1E0:47:66:36:30:66 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:42 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:38:1:1:0:34:2.94%:51:5E-1:42:33:14:19:34 0/0:60:1:0:1:48:2.08%:76:5E-1:47:47:20:27:48 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:39:1:1:0:21:4.76%:31:5E-1:47:20:10:10:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:60:1:0:1:33:3.03%:52:5E-1:45:32:18:14:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:6:17:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:38:1:1:0:32:3.12%:48:5E-1:47:31:14:17:32 0/0:0:0:0:0:47:0%:89:1E0:48:47:27:20:48 0/0:0:0:0:0:13:0%:25:1E0:51:13:7:6:13 0/0:60:1:0:1:43:2.33%:70:5E-1:46:42:21:21:43 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:39:1:1:0:40:2.5%:62:5E-1:45:39:23:16:40 0/0:60:1:0:1:28:3.57%:41:5E-1:42:27:11:16:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:45:0%:85:1E0:46:45:22:23:45 0/0:0:0:0:0:44:0%:81:1E0:45:44:19:25:44 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:25 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:64:0%:99:1E0:46:64:29:35:64 0/0:0:0:0:0:35:0%:67:1E0:47:35:24:11:35 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:24:0%:44:1E0:47:24:8:16:24 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:51:35:21:14:35 0/0:0:0:0:0:16:0%:29:1E0:53:16:9:7:16 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:11:19:31 0/0:54:1:0:1:32:3.12%:48:5E-1:46:31:20:11:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:37:1:1:0:27:3.7%:41:5E-1:46:26:7:19:27 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:38 0/0:0:0:0:0:46:0%:85:1E0:45:46:21:25:48 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/1:47:17:8:9:22:77.27%:76:2.3502E-8:54:4:2:2:22 0/0:60:1:0:1:31:3.23%:48:5E-1:46:30:21:9:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:11:27:38 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:40 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:26 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:41 0/0:0:0:0:0:17:0%:33:1E0:48:17:10:7:17 0/0:49:2:1:1:28:7.14%:34:2.4545E-1:39:26:16:10:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:62:0%:99:1E0:42:62:38:24:62 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:46 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:19 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:60:1:0:1:42:2.38%:66:5E-1:49:41:20:21:43 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:38 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:34:0%:62:1E0:49:34:15:19:34 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:48 0/0:60:1:1:0:36:2.78%:55:5E-1:41:35:18:17:36 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:23 0/0:0:0:0:0:50:0%:92:1E0:47:50:26:24:50 0/0:0:0:0:0:52:0%:96:1E0:41:52:28:24:53 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:49 0/0:0:0:0:0:44:0%:81:1E0:40:44:28:16:45 0/0:0:0:0:0:47:0%:89:1E0:43:47:30:17:48 0/0:0:0:0:0:50:0%:92:1E0:41:50:17:33:51 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:38 0/0:0:0:0:0:57:0%:99:1E0:42:57:31:26:58 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:60:1:0:1:64:1.56%:99:5E-1:39:63:37:26:64 0/0:0:0:0:0:42:0%:77:1E0:46:42:24:18:44 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:52 0/0:39:1:0:1:46:2.17%:73:5E-1:44:45:22:23:46 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:43:0%:82:1E0:45:43:29:14:43 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 MTB_anc 1341103 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|esxL_Rv1198|gene1221|transcript|Transcript_gene1221|Coding|1/1|c.98G>C|p.Arg33Pro|98/285|98/285|33/94||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1341103G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1341103G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:39:1:1:0:47:2.13%:77:5E-1:43:46:20:26:48 0/0:0:0:0:0:14:0%:25:1E0:50:14:7:7:14 0/0:0:0:0:0:44:0%:81:1E0:49:44:28:16:44 0/0:38:1:0:1:36:2.78%:55:5E-1:51:35:18:17:36 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:37 0/0:0:0:0:0:38:0%:70:1E0:52:38:22:16:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:60:2:0:2:45:4.44%:64:2.4719E-1:50:43:20:23:45 0/0:0:0:0:0:30:0%:55:1E0:51:30:21:9:30 0/0:0:0:0:0:40:0%:74:1E0:48:40:20:20:40 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:19 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:43 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:29 0/0:0:0:0:0:24:0%:44:1E0:47:24:6:18:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:56:0%:99:1E0:46:56:32:24:56 0/0:0:0:0:0:35:0%:67:1E0:49:35:19:16:35 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:39:1:0:1:23:4.35%:34:5E-1:45:22:12:10:23 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:60:1:1:0:18:5.56%:24:5E-1:50:16:9:7:18 0/0:39:1:0:1:33:3.03%:52:5E-1:42:32:20:12:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:31 0/0:0:0:0:0:47:0%:89:1E0:47:47:28:19:47 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:48:35:13:22:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 0/0:0:0:0:0:66:0%:99:1E0:47:66:36:30:66 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:42 0/0:0:0:0:0:36:0%:66:1E0:48:36:15:21:36 0/0:38:1:1:0:34:2.94%:51:5E-1:42:33:14:19:34 0/0:53:1:0:1:49:2.04%:80:5E-1:47:48:20:28:49 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:39:1:1:0:21:4.76%:31:5E-1:47:20:10:10:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:60:1:0:1:33:3.03%:52:5E-1:46:32:18:14:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:6:17:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:38:1:1:0:32:3.12%:48:5E-1:47:31:14:17:32 0/0:0:0:0:0:47:0%:89:1E0:48:47:27:20:48 0/0:0:0:0:0:14:0%:25:1E0:50:14:8:6:14 0/0:60:1:0:1:43:2.33%:70:5E-1:47:42:21:21:43 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:23 0/0:39:1:1:0:40:2.5%:62:5E-1:46:39:23:16:40 0/0:60:1:0:1:28:3.57%:41:5E-1:42:27:11:16:28 0/0:0:0:0:0:37:0%:70:1E0:48:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:45:0%:85:1E0:46:45:22:23:45 0/0:0:0:0:0:44:0%:81:1E0:45:44:19:25:45 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:32 0/0:39:1:0:1:27:3.7%:41:5E-1:42:26:15:11:28 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:63:0%:99:1E0:47:63:28:35:64 0/0:0:0:0:0:34:0%:62:1E0:48:34:23:11:35 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:34 0/0:0:0:0:0:23:0%:44:1E0:48:23:15:8:23 0/0:0:0:0:0:24:0%:44:1E0:47:24:8:16:24 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:51:35:21:14:35 0/0:0:0:0:0:16:0%:29:1E0:53:16:9:7:16 0/0:0:0:0:0:43:0%:82:1E0:46:43:24:19:43 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:11:19:31 0/0:60:1:0:1:32:3.12%:48:5E-1:46:31:20:11:32 0/0:38:1:1:0:30:3.33%:44:5E-1:48:29:18:11:30 0/0:39:1:1:0:27:3.7%:41:5E-1:45:26:7:19:27 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:38 0/0:0:0:0:0:49:0%:93:1E0:45:49:22:27:49 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/1:47:18:8:10:23:81.82%:81:7.1052E-9:54:4:2:2:23 0/0:37:1:0:1:32:3.12%:48:5E-1:45:30:21:9:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:38:0%:70:1E0:46:38:11:27:38 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:40 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:26 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:41 0/0:0:0:0:0:17:0%:33:1E0:48:17:10:7:17 0/0:49:2:1:1:30:6.67%:37:2.4576E-1:39:28:17:11:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:0:0:0:0:62:0%:99:1E0:42:62:38:24:62 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:40 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:46 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:33 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:19 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:49:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:60:1:0:1:42:2.38%:66:5E-1:49:41:21:20:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:34:0%:62:1E0:49:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:38 0/0:0:0:0:0:45:0%:85:1E0:45:45:28:17:48 0/0:60:1:1:0:35:2.86%:55:5E-1:42:34:18:16:36 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:36 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:23 0/0:0:0:0:0:50:0%:92:1E0:48:50:26:24:51 0/0:0:0:0:0:53:0%:99:1E0:42:53:28:25:53 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:31 0/0:0:0:0:0:49:0%:93:1E0:42:49:30:19:49 0/0:0:0:0:0:44:0%:81:1E0:40:44:29:15:45 0/0:0:0:0:0:46:0%:85:1E0:44:46:30:16:47 0/0:0:0:0:0:51:0%:97:1E0:41:51:18:33:51 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:46 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:56:0%:99:1E0:43:56:31:25:57 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:46 0/0:0:0:0:0:43:0%:82:1E0:41:43:26:17:44 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:63:0%:99:1E0:40:63:37:26:63 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:52 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:46 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:42 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:43:0%:82:1E0:46:43:29:14:43 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:39 MTB_anc 1341624 . G T . PASS AC=32;AF=1.00;AN=32;ANN=T|missense_variant|MODERATE|Rv1199c_Rv1199c|gene1222|transcript|Transcript_gene1222|Coding|1/1|c.982C>A|p.Gln328Lys|982/1248|982/1248|328/415||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1341624G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1341624G>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 1341750 . C T . PASS AC=2;AF=1.00;AN=2;ANN=T|missense_variant|MODERATE|Rv1199c_Rv1199c|gene1222|transcript|Transcript_gene1222|Coding|1/1|c.856G>A|p.Asp286Asn|856/1248|856/1248|286/415||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1341750C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1341750C>T||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. 1/1:38:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1342581 . T C . PASS AC=283;AF=0.983;AN=288;ANN=C|missense_variant|MODERATE|Rv1199c_Rv1199c|gene1222|transcript|Transcript_gene1222|Coding|1/1|c.25A>G|p.Thr9Ala|25/1248|25/1248|9/415||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1342581T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1342581T>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:16:13:3:17:94.12%:81:7.7134E-9:38:1:0:1:17 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:51:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:48:6:3:3:7:85.71%:26:2.331E-3:60:1:1:0:7 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:49:8:2:6:9:88.89%:36:2.0568E-4:36:1:0:1:9 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:20:10:10:21:95.24%:99:4.0873E-11:38:1:1:0:21 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:14:8:6:15:93.33%:69:1.0315E-7:60:1:1:0:15 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:46:7:5:2:8:87.5%:31:6.993E-4:60:1:0:1:8 1/1:44:16:10:6:17:94.12%:81:7.7134E-9:36:1:1:0:17 1/1:43:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:50:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:52:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:12:5:7:13:92.31%:58:1.3461E-6:36:1:1:0:13 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:9:6:3:10:90%:42:5.9538E-5:32:1:1:0:10 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:53:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:22:12:10:23:95.65%:99:2.9149E-12:38:1:1:0:23 1/1:44:19:9:10:20:95%:98:1.5234E-10:60:1:1:0:21 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:19:13:6:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:18:13:5:19:94.74%:92:5.6585E-10:50:1:1:0:19 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:15:9:6:16:93.75%:75:2.8282E-8:38:1:1:0:16 1/1:45:11:4:7:12:91.67%:53:4.8074E-6:38:1:0:1:12 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 0/1:42:7:4:3:8:87.5%:31:6.993E-4:35:1:1:0:9 1/1:42:17:8:9:18:94.44%:86:2.0936E-9:60:1:1:0:20 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:20:10:10:21:95.24%:99:4.0873E-11:37:1:1:0:22 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 0/1:43:14:6:8:16:87.5%:65:2.5454E-7:60:2:2:0:17 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 MTB_anc 1346566 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1203c_Rv1203c|gene1226|transcript|Transcript_gene1226|Coding|1/1|c.340G>T|p.Ala114Ser|340/585|340/585|114/194||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1346566C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1346566C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:50:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:51:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:27:16:11:28:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:15:16:32:96.88%:99:1.8007E-17:39:1:1:0:32 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:50:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:38:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:37:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:43:16:27:44:97.73%:99:1.7144E-24:60:1:1:0:45 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:45:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 1351172 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|co-trimoxazole|||n.1351172G>A||||||,A|intergenic_region|MODIFIER|fadD6_Rv1206-folP2_Rv1207|gene1229-gene1230|intergenic_region|gene1229-gene1230|||n.1351172G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:32:18:14:33:96.97%:99:4.7095E-18:38:1:1:0:34 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:25:13:12:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:39:23:16:40:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:37:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:30:25:5:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:38:32:6:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:32:26:6:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:49:34:15:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 MTB_anc 1356135 . C T . PASS AC=298;AF=1.00;AN=298;ANN=T|synonymous_variant|LOW|glgC_Rv1213|gene1236|transcript|Transcript_gene1236|Coding|1/1|c.300C>T|p.Thr100Thr|300/1215|300/1215|100/404||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1356135C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1356135C>T||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:57:17:40:57:100%:99:6.4572E-34:0:0:0:0:62 1/1:40:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:25:4:21:25:100%:99:7.9107E-15:0:0:0:0:32 1/1:39:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:34:7:27:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:35 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:18:8:10:19:94.74%:99:1.1019E-10:0:0:0:0:22 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:57:12:45:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:38:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:37:29:4:25:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:32:4:28:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:39:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:38:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:38:8:30:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:27 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:39:5:34:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:40:3:37:40:100%:99:9.3017E-24:0:0:0:0:46 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:33:7:26:34:97.06%:99:1.2301E-18:38:1:1:0:39 1/1:41:28:4:24:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:36:24:4:20:24:100%:99:3.101E-14:0:0:0:0:29 1/1:38:25:2:23:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:40:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:37:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:37 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:37:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:38 1/1:38:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:43:8:35:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:36:39:9:30:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:28 1/1:37:32:4:28:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:31 1/1:36:38:6:32:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:37:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:22:1:21:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:37:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:30:5:25:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:38:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:36:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:46 1/1:36:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:35:5:30:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:37:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:33 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:35:4:31:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 MTB_anc 1358348 . C A . PASS AC=70;AF=0.233;AN=300;ANN=A|missense_variant|MODERATE|Rv1215c_Rv1215c|gene1238|transcript|Transcript_gene1238|Coding|1/1|c.1097G>T|p.Arg366Leu|1097/1686|1097/1686|366/561||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1358348C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1358348C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:39:55:21:34:55 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:39:0%:74:1E0:45:39:14:25:39 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:23:0%:44:1E0:50:23:16:7:23 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:29 0/0:0:0:0:0:15:0%:29:1E0:46:15:6:9:15 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:42 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:49:21:28:50:98%:99:5.0549E-28:38:1:0:1:50 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:45:0%:85:1E0:40:45:16:29:45 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:20 0/0:0:0:0:0:42:0%:77:1E0:40:42:15:27:42 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:40 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:17 0/0:0:0:0:0:34:0%:62:1E0:40:34:11:23:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:33:0%:63:1E0:41:33:10:23:33 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 1/1:43:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:46:0%:85:1E0:39:46:18:28:46 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:36 0/0:0:0:0:0:59:0%:99:1E0:44:59:27:32:60 1/1:40:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:26:0%:47:1E0:41:26:7:19:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:5:21:26 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:50:0%:92:1E0:39:50:15:35:51 0/0:0:0:0:0:45:0%:85:1E0:40:45:20:25:45 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:38 0/0:0:0:0:0:21:0%:40:1E0:43:21:4:17:21 0/0:0:0:0:0:50:0%:92:1E0:40:50:21:29:51 0/0:0:0:0:0:16:0%:29:1E0:46:16:3:13:17 0/0:0:0:0:0:36:0%:66:1E0:41:36:10:26:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:51:0%:97:1E0:40:51:15:36:51 0/0:0:0:0:0:35:0%:67:1E0:39:35:10:25:35 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:52:0%:96:1E0:41:52:21:31:52 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:43:0%:82:1E0:39:43:15:28:43 0/0:0:0:0:0:49:0%:93:1E0:39:49:19:30:49 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:28 0/0:0:0:0:0:55:0%:99:1E0:42:55:19:36:55 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:19 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 1/1:43:34:8:26:35:97.14%:99:3.2089E-19:37:1:1:0:35 0/0:0:0:0:0:36:0%:66:1E0:39:36:10:26:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:33 0/0:0:0:0:0:50:0%:92:1E0:40:50:18:32:50 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:39:0%:74:1E0:40:39:10:29:39 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:3:19:22 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:27:0%:52:1E0:38:27:8:19:27 0/0:0:0:0:0:36:0%:66:1E0:41:36:11:25:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:7:23:30 0/0:0:0:0:0:52:0%:96:1E0:39:52:18:34:53 0/0:39:1:1:0:28:3.57%:41:5E-1:42:27:12:15:28 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:42 0/0:0:0:0:0:20:0%:36:1E0:40:20:6:14:20 1/1:41:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:10:24:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 0/0:0:0:0:0:17:0%:33:1E0:42:17:10:7:17 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:10:20:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:26 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:20:0%:36:1E0:39:20:6:14:20 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:21 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:34 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:26 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:45 0/0:0:0:0:0:40:0%:74:1E0:40:40:13:27:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 1/1:39:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:44:0%:81:1E0:39:44:14:30:46 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:39:8:31:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:50 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:36 1/1:37:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:45 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:39:0%:74:1E0:39:39:13:26:41 0/0:0:0:0:0:32:0%:59:1E0:37:32:11:21:34 0/0:0:0:0:0:32:0%:59:1E0:39:32:5:27:33 0/0:0:0:0:0:43:0%:82:1E0:39:43:13:30:43 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:34 0/0:0:0:0:0:34:0%:62:1E0:39:34:10:24:34 0/0:0:0:0:0:49:0%:93:1E0:39:49:13:36:49 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:26 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:30 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:30 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:39 0/0:0:0:0:0:47:0%:89:1E0:41:47:17:30:47 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:31 MTB_anc 1358940 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1215c_Rv1215c|gene1238|transcript|Transcript_gene1238|Coding|1/1|c.505T>G|p.Ser169Ala|505/1686|505/1686|169/561||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1358940A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1358940A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:23:6:17:24:95.83%:99:7.7525E-13:37:1:0:1:24 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:48:17:31:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:40:14:26:41:97.56%:99:9.8874E-23:39:1:0:1:42 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:39:12:27:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:30:13:17:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:40:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:40:18:22:41:97.56%:99:9.8874E-23:39:1:0:1:42 1/1:42:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:49:18:31:49:100%:99:3.925E-29:0:0:0:0:51 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:36:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:37:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:36:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:38:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 1360496 . C A . PASS AC=124;AF=0.413;AN=300;ANN=A|missense_variant|MODERATE|Rv1217c_Rv1217c|gene1240|transcript|Transcript_gene1240|Coding|1/1|c.1306G>T|p.Val436Phe|1306/1647|1306/1647|436/548||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1360496C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1360496C>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 0/0:0:0:0:0:48:0%:89:1E0:37:48:33:15:49 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 0/0:0:0:0:0:20:0%:36:1E0:36:20:15:5:20 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:27 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:24:0%:44:1E0:35:24:17:7:26 1/1:36:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:16 1/1:35:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:14:0%:25:1E0:35:14:9:5:14 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:22 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:18:0%:32:1E0:37:18:13:5:18 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:20 0/0:0:0:0:0:23:0%:44:1E0:36:23:15:8:24 1/1:36:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:35:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:17 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:33 0/0:35:1:0:1:25:4%:38:5E-1:37:24:18:6:25 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:31:0%:59:1E0:36:31:19:12:31 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:25 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:28 1/1:35:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:26 1/1:37:31:17:14:32:96.88%:99:1.8007E-17:24:1:1:0:34 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:38:0%:70:1E0:36:38:27:11:38 1/1:35:49:28:21:49:100%:99:3.925E-29:0:0:0:0:53 0/0:0:0:0:0:24:0%:44:1E0:36:24:15:9:24 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:41:0%:78:1E0:37:41:24:17:43 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:30 1/1:36:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:36:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:36:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:51:0%:97:1E0:38:51:31:20:52 1/1:35:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:35:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:36:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:34 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:27 1/1:39:35:20:15:36:97.22%:99:8.3613E-20:38:1:1:0:39 1/1:36:35:21:14:36:97.22%:99:8.3613E-20:37:1:1:0:37 0/0:0:0:0:0:31:0%:59:1E0:36:31:19:12:31 1/1:35:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:29 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:29 0/0:0:0:0:0:39:0%:74:1E0:37:39:26:13:39 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:30 0/0:0:0:0:0:35:0%:67:1E0:37:35:20:15:35 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:20 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:27 0/0:0:0:0:0:47:0%:89:1E0:37:47:28:19:47 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:28:0%:51:1E0:36:28:19:9:29 1/1:36:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:54:0%:99:1E0:36:54:34:20:55 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:36:25:16:9:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 0/0:0:0:0:0:28:0%:51:1E0:35:28:21:7:29 1/1:35:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:25:0%:48:1E0:36:25:16:9:26 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:30:0%:55:1E0:36:30:17:13:30 1/1:37:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:35:33:20:13:35:94.29%:99:5.9366E-18:38:2:1:1:36 1/1:35:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:36:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:13 0/0:0:0:0:0:24:0%:44:1E0:36:24:13:11:26 0/0:0:0:0:0:33:0%:63:1E0:35:33:17:16:35 0/0:0:0:0:0:34:0%:62:1E0:37:34:23:11:35 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:14 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:40 0/0:0:0:0:0:22:0%:40:1E0:35:22:14:8:23 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:19 0/0:0:0:0:0:20:0%:36:1E0:35:20:12:8:20 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:22 0/0:0:0:0:0:16:0%:29:1E0:37:16:12:4:18 0/0:0:0:0:0:29:0%:55:1E0:39:29:23:6:29 0/0:0:0:0:0:28:0%:52:1E0:38:27:15:12:28 0/0:0:0:0:0:24:0%:44:1E0:36:24:16:8:25 0/0:0:0:0:0:31:0%:59:1E0:36:31:24:7:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:22:8:30 0/0:0:0:0:0:20:0%:36:1E0:35:20:11:9:20 0/0:0:0:0:0:39:0%:74:1E0:36:39:23:16:40 0/0:0:0:0:0:18:0%:32:1E0:33:18:15:3:20 0/0:0:0:0:0:32:0%:59:1E0:36:32:21:11:33 0/0:0:0:0:0:20:0%:36:1E0:35:20:16:4:20 0/0:0:0:0:0:22:0%:40:1E0:36:22:15:7:23 0/0:0:0:0:0:18:0%:32:1E0:36:18:13:5:19 0/0:0:0:0:0:39:0%:74:1E0:35:39:24:15:40 0/0:0:0:0:0:42:0%:77:1E0:36:42:24:18:44 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:24 0/0:0:0:0:0:13:0%:25:1E0:40:13:6:7:13 0/0:0:0:0:0:40:0%:74:1E0:36:40:29:11:42 0/0:0:0:0:0:31:0%:59:1E0:36:31:24:7:31 0/0:0:0:0:0:25:0%:48:1E0:36:25:24:1:28 0/0:0:0:0:0:23:0%:44:1E0:36:23:17:6:24 0/0:0:0:0:0:30:0%:55:1E0:35:30:21:9:30 0/0:0:0:0:0:20:0%:36:1E0:36:20:15:5:22 0/0:0:0:0:0:24:0%:44:1E0:34:24:20:4:26 0/0:0:0:0:0:27:0%:52:1E0:37:27:22:5:27 0/0:0:0:0:0:30:0%:55:1E0:36:30:19:11:30 0/0:0:0:0:0:23:0%:44:1E0:37:23:16:7:24 0/0:0:0:0:0:31:0%:59:1E0:36:31:20:11:33 0/0:0:0:0:0:19:0%:37:1E0:36:19:13:6:19 0/0:0:0:0:0:21:0%:40:1E0:36:21:14:7:21 1/1:36:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:36:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:37:0%:70:1E0:36:37:27:10:39 0/0:0:0:0:0:25:0%:48:1E0:36:25:14:11:26 0/0:0:0:0:0:21:0%:40:1E0:36:21:13:8:21 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:23 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:30 0/0:0:0:0:0:27:0%:52:1E0:37:27:16:11:29 0/0:0:0:0:0:26:0%:47:1E0:36:26:16:10:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:24 0/0:0:0:0:0:38:0%:70:1E0:35:38:21:17:40 1/1:34:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 MTB_anc 1360805 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1217c_Rv1217c|gene1240|transcript|Transcript_gene1240|Coding|1/1|c.997A>C|p.Ile333Leu|997/1647|997/1647|333/548||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1360805T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1360805T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:50:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:49 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:39:24:15:40:97.5%:99:3.8137E-22:38:1:1:0:40 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:51:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:53:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:43 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:33:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:36:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:46:22:24:47:97.87%:99:2.9526E-26:50:1:0:1:48 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:58:20:38:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:44:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:32:16:16:33:96.97%:99:4.7095E-18:37:1:1:0:33 MTB_anc 1365837 . C CG . PASS AC=292;AF=0.973;AN=300;ANN=CG|intergenic_region|MODIFIER|rseA_Rv1222-htrA_Rv1223|gene1245-gene1246|intergenic_region|gene1245-gene1246|||n.1365837_1365838insG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:45:25:20:45:97.83%:99:1.1441E-25:37:1:1:0:46 1/1:48:16:12:4:17:94.12%:81:7.7134E-9:60:1:1:0:17 1/1:47:44:26:18:47:93.62%:99:1.2056E-23:33:3:1:2:47 1/1:45:31:13:18:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:28:15:13:30:93.33%:99:4.194E-15:34:2:2:0:30 1/1:47:23:11:12:24:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:51:28:13:15:30:93.33%:99:4.194E-15:34:2:1:1:30 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:11:16:28:96.43%:99:3.7915E-15:32:1:1:0:28 1/1:48:25:11:14:27:92.59%:99:2.0853E-13:46:2:1:1:27 0/1:39:21:7:14:23:87.5%:99:3.6437E-11:47:2:1:1:23 1/1:43:50:24:26:51:98.04%:99:1.3013E-28:27:1:1:0:51 1/1:49:13:7:6:14:92.86%:64:3.7391E-7:30:1:1:0:14 1/1:44:45:25:20:45:97.83%:99:1.1441E-25:60:1:0:1:47 1/1:41:26:16:10:26:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:42:43:23:20:43:97.73%:99:1.7144E-24:37:1:1:0:44 1/1:43:27:13:14:27:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:32:15:17:31:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:41:23:18:43:95.35%:99:1.4915E-22:36:2:1:1:43 1/1:42:39:17:22:41:92.86%:99:8.4519E-21:34:3:1:2:42 1/1:44:42:22:20:43:97.67%:99:6.6289E-24:34:1:0:1:43 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:43:23:20:45:95.56%:99:1.0412E-23:36:2:1:1:45 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:26:10:16:27:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:40:35:21:14:37:94.59%:99:4.2437E-19:46:2:1:1:38 1/1:43:23:15:8:23:95.83%:99:7.7525E-13:35:1:0:1:24 1/1:42:31:14:17:33:93.94%:99:8.2416E-17:38:2:0:2:33 1/1:42:35:17:18:35:97.22%:99:8.9137E-21:0:0:0:0:35 1/1:47:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:44:26:18:46:95.65%:99:2.7459E-24:33:2:2:0:46 1/1:51:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:24:14:10:25:92.31%:99:7.6222E-13:33:2:1:1:26 1/1:45:29:15:14:29:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:44:36:11:25:39:92.31%:99:4.2179E-19:35:3:0:3:39 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:60:29:31:62:96.77%:99:1.3256E-33:38:2:2:0:62 1/1:47:48:24:24:51:94.12%:99:1.3143E-26:35:2:1:1:52 1/1:45:40:23:17:40:95.24%:99:5.6346E-22:54:2:1:1:42 1/1:43:44:21:23:44:97.78%:99:4.4304E-25:34:1:0:1:45 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 0/1:43:23:9:14:27:85.19%:99:1.6161E-11:40:4:3:1:27 1/1:48:27:11:16:29:90%:99:4.6134E-14:33:3:1:2:30 1/1:43:46:30:16:47:95.83%:99:2.9526E-26:37:1:1:0:48 1/1:45:40:19:21:41:97.56%:99:9.8874E-23:34:1:1:0:41 1/1:48:37:17:20:39:94.87%:99:3.0128E-20:34:2:1:1:39 1/1:43:63:27:36:68:90%:99:8.5235E-33:40:6:5:1:69 1/1:46:41:26:15:44:93.18%:99:6.1775E-22:35:3:3:0:44 1/1:44:49:22:27:52:94.23%:99:1.6572E-26:34:3:2:1:52 0/1:48:13:6:7:14:86.67%:60:8.7675E-7:60:2:1:1:15 1/1:41:49:29:20:49:96.08%:99:3.4484E-27:35:2:1:1:51 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:18:11:31:93.55%:99:1.1344E-15:36:2:0:2:31 1/1:43:28:15:13:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:42:48:30:18:48:97.96%:99:1.9625E-27:60:1:0:1:49 1/1:44:48:28:20:50:92.31%:99:1.3143E-26:36:2:1:1:51 1/1:45:31:18:13:32:96.88%:99:1.8007E-17:34:1:1:0:32 1/1:42:50:28:22:52:96.15%:99:9.0394E-28:33:2:0:2:52 1/1:49:38:18:20:40:95%:99:8.0088E-21:34:2:1:1:40 1/1:44:27:13:14:29:93.1%:99:1.5465E-14:35:2:1:1:29 1/1:42:38:21:17:39:97.44%:99:1.4697E-21:34:1:1:0:39 1/1:45:47:29:18:49:95.92%:99:5.0044E-26:35:2:1:1:50 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:60:26:34:64:92.31%:99:1.2731E-31:35:5:3:2:66 1/1:45:36:15:21:38:94.74%:99:1.1316E-19:38:2:2:0:38 1/1:44:45:19:26:46:95.74%:99:7.2338E-25:47:2:1:1:47 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:25:12:13:27:92.59%:99:2.0853E-13:38:2:2:0:27 1/1:49:37:18:19:38:94.87%:99:3.0128E-20:46:2:2:0:39 1/1:48:26:16:10:27:96.3%:99:1.4382E-14:33:1:1:0:27 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:30:15:15:33:90.91%:99:9.89E-16:51:3:0:3:33 1/1:43:47:25:22:51:92.16%:99:8.5347E-25:35:4:3:1:51 1/1:42:26:15:11:27:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:43:51:25:26:51:96.23%:99:3.3479E-29:37:1:1:0:53 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:55:27:28:56:98.21%:99:1.4593E-31:60:1:1:0:56 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:48:22:26:50:96%:99:1.3143E-26:35:2:1:1:50 1/1:45:71:30:41:73:95.95%:99:3.1311E-39:33:3:2:1:74 1/1:44:42:20:22:45:93.33%:99:1.6658E-22:43:3:2:1:45 1/1:46:27:17:10:30:90%:99:4.6134E-14:34:3:3:0:30 1/1:41:42:23:19:44:95.45%:99:3.9431E-23:37:2:2:0:44 1/1:43:37:18:19:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:45:49:27:22:50:96.08%:99:3.4484E-27:33:2:1:1:51 1/1:48:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:25:13:12:26:96.15%:99:5.4444E-14:38:1:1:0:26 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:15:16:31:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:52:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:47:22:25:46:97.92%:99:7.6145E-27:37:1:1:0:49 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:53:26:27:54:96.36%:99:1.6199E-29:36:2:2:0:56 1/1:44:18:9:9:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:42:27:12:15:27:96.43%:99:3.7915E-15:27:1:1:0:28 1/1:43:36:18:18:37:97.3%:99:2.1762E-20:37:1:1:0:37 1/1:45:33:21:12:35:94.29%:99:5.9366E-18:35:2:1:1:35 1/1:45:35:23:12:36:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:46:44:27:17:45:97.78%:99:4.4304E-25:30:1:1:0:45 1/1:45:30:20:10:32:93.75%:99:3.0612E-16:37:2:2:0:32 1/1:41:33:16:17:33:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:13:14:25:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:31:15:16:32:93.94%:99:1.8007E-17:35:1:1:0:33 1/1:43:44:24:20:44:97.78%:99:4.4304E-25:34:1:1:0:45 1/1:50:28:20:8:29:96.55%:99:9.9776E-16:29:1:0:1:29 1/1:45:34:17:17:37:91.89%:99:5.6582E-18:42:3:1:2:37 1/1:45:39:15:24:41:95.12%:99:2.1258E-21:35:2:1:1:41 1/1:44:26:13:13:26:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:40:35:15:20:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:18:16:36:94.44%:99:1.5887E-18:36:2:1:1:37 1/1:40:45:28:17:48:93.75%:99:3.2362E-24:35:3:3:0:48 1/1:38:27:13:14:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:13:15:28:93.33%:99:4.194E-15:34:2:2:0:30 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:53:31:22:55:96.36%:99:1.6199E-29:37:2:2:0:55 1/1:43:47:22:25:50:94%:99:2.3219E-25:33:3:2:1:50 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:39:37:16:21:40:92.5%:99:1.1479E-19:32:3:1:2:42 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 0/1:39:33:11:22:35:89.19%:99:5.7997E-17:34:4:1:3:37 0/1:41:37:18:19:44:84.09%:99:4.4107E-18:34:7:5:2:44 1/1:38:37:17:20:38:94.87%:99:3.0128E-20:37:2:2:0:39 1/1:42:39:22:17:39:97.5%:99:3.8137E-22:37:1:1:0:40 1/1:42:28:13:15:30:93.33%:99:4.194E-15:32:2:1:1:30 1/1:43:31:19:12:34:91.18%:99:2.7308E-16:31:3:1:2:34 1/1:38:38:18:20:37:97.44%:99:1.4697E-21:35:1:0:1:40 1/1:41:40:19:21:40:97.56%:99:9.8874E-23:33:1:1:0:41 1/1:40:29:13:16:30:96.67%:99:2.6212E-16:33:1:1:0:32 1/1:39:33:14:19:35:94.29%:99:5.9366E-18:33:2:2:0:35 0/1:38:51:21:30:57:89.47%:99:4.3874E-26:35:6:4:2:57 1/1:43:38:11:27:41:90.48%:99:9.7197E-20:43:4:4:0:42 1/1:42:39:19:20:41:92.86%:99:8.4519E-21:60:3:2:1:42 0/1:42:29:13:16:34:85.29%:99:2.0235E-14:35:5:3:2:34 1/1:45:45:23:22:45:97.83%:99:1.1441E-25:32:1:1:0:47 0/1:44:25:17:8:27:89.29%:99:5.8768E-13:35:3:2:1:28 1/1:44:45:24:21:50:90%:99:1.1493E-23:36:4:4:0:50 1/1:43:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:29:14:15:29:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:43:19:8:11:20:90.48%:93:4.7003E-10:48:2:2:0:21 1/1:45:32:20:12:34:94.12%:99:2.2142E-17:35:2:2:0:34 1/1:41:40:17:23:41:95.24%:99:5.6346E-22:35:2:0:2:42 1/1:43:49:22:27:52:94.23%:99:1.6572E-26:31:3:2:1:52 1/1:41:32:17:15:33:96.97%:99:4.7095E-18:37:1:1:0:33 MTB_anc 1366392 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|htrA_Rv1223|gene1246|transcript|Transcript_gene1246|Coding|1/1|c.518G>A|p.Gly173Asp|518/1587|518/1587|173/528||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1366392G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1366392G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:58:38:20:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:63:27:36:63:100%:99:1.657E-37:0:0:0:0:65 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:28:17:11:29:96.55%:99:9.9776E-16:38:1:1:0:31 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:60:37:23:60:100%:99:1.035E-35:0:0:0:0:62 1/1:47:37:20:17:38:97.37%:99:5.6582E-21:60:1:1:0:40 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:50:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:43:25:18:44:97.73%:99:1.7144E-24:37:1:1:0:44 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:67:37:30:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:52 1/1:38:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:63:39:24:63:100%:99:1.657E-37:0:0:0:0:63 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:51:35:16:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:33:13:20:34:97.06%:99:1.2301E-18:38:1:0:1:34 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 1367484 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|tatB_Rv1224|gene1247|transcript|Transcript_gene1247|Coding|1/1|c.22G>T|p.Gly8Trp|22/396|22/396|8/131||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1367484G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1367484G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:39:20:19:40:97.5%:99:3.8137E-22:32:1:1:0:42 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:49:30:19:50:98%:99:5.0549E-28:38:1:1:0:53 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:61:34:27:61:100%:99:2.609E-36:0:0:0:0:63 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:22:13:36:97.22%:99:8.3613E-20:60:1:1:0:38 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:51:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:48:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 1368834 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|stop_lost&splice_region_variant|HIGH|Rv1226c_Rv1226c|gene1249|transcript|Transcript_gene1249|Coding|1/1|c.1462T>C|p.Ter488Argext*?|1462/1464|1462/1464|488/487||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1368834A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1368834A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:45:44:17:27:45 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:17 0/0:0:0:0:0:56:0%:99:1E0:45:56:30:26:56 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:22 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:23 0/0:0:0:0:0:36:0%:66:1E0:47:36:14:22:36 0/0:0:0:0:0:23:0%:44:1E0:45:23:16:7:24 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:37:0%:70:1E0:50:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:46:0%:85:1E0:46:46:15:31:47 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:37 0/0:0:0:0:0:50:0%:92:1E0:43:50:15:35:50 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:38:0%:70:1E0:47:38:15:23:38 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:22 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:33 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:48 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:61:0%:99:1E0:45:61:26:35:61 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:13:26:39 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:29 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:45 0/0:0:0:0:0:42:0%:77:1E0:39:42:16:26:42 0/0:0:0:0:0:47:0%:89:1E0:46:47:26:21:47 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:15 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:15:0%:29:1E0:46:15:5:10:15 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:24:10:34 0/0:0:0:0:0:44:0%:81:1E0:41:44:15:29:44 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:12:0%:21:1E0:45:12:5:7:13 0/0:0:0:0:0:42:0%:77:1E0:46:42:16:26:42 0/0:0:0:0:0:53:0%:99:1E0:43:53:23:30:53 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:19:29:48 0/0:0:0:0:0:20:0%:36:1E0:51:20:15:5:20 0/0:0:0:0:0:16:0%:29:1E0:46:16:4:12:16 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:37:0%:70:1E0:49:37:13:24:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:40 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:26:0%:47:1E0:49:26:9:17:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:29:0%:55:1E0:45:29:7:22:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:53:0%:99:1E0:43:53:22:31:53 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:18 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:10:22:32 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/1:42:15:9:6:44:34.09%:51:7.2456E-6:45:29:11:18:44 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:42 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:26 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:12:0%:21:1E0:40:12:8:4:13 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:16:0%:29:1E0:41:16:12:4:16 0/0:0:0:0:0:53:0%:99:1E0:45:53:23:30:54 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:35 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:36:1:1:0:22:4.55%:31:5E-1:41:21:13:8:22 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:50 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:19:0%:37:1E0:39:19:13:6:19 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:39:0%:74:1E0:39:39:24:15:39 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:46 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:41 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:10:23:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 MTB_anc 1368947 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1226c_Rv1226c|gene1249|transcript|Transcript_gene1249|Coding|1/1|c.1349C>T|p.Ala450Val|1349/1464|1349/1464|450/487||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1368947G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1368947G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:55:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:46:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:50:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:38:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 1373439 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv1230c_Rv1230c|gene1254|transcript|Transcript_gene1254|Coding|1/1|c.759G>A|p.Ala253Ala|759/1236|759/1236|253/411||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1373439C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1373439C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:42:52:16:36:52 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:49 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:9:27:37 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:36 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:12:25:37 0/0:0:0:0:0:25:0%:48:1E0:49:25:8:17:26 0/0:34:1:0:1:48:2.08%:76:5E-1:43:47:18:29:49 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:7:23:31 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:55:0%:99:1E0:40:55:26:29:55 0/0:0:0:0:0:25:0%:48:1E0:45:25:7:18:25 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:46 0/0:0:0:0:0:33:0%:63:1E0:43:33:8:25:33 0/0:0:0:0:0:14:0%:25:1E0:46:14:5:9:14 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:31 0/0:0:0:0:0:14:0%:25:1E0:45:14:6:8:14 0/0:0:0:0:0:40:0%:74:1E0:46:40:14:26:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:12:26:38 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:39:0%:74:1E0:45:39:13:26:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:26 0/0:0:0:0:0:48:0%:89:1E0:44:48:18:30:48 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:16:29:45 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:14:28:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:40 0/0:0:0:0:0:48:0%:89:1E0:42:48:15:33:49 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:60:1:0:1:20:5%:27:5E-1:42:19:5:14:20 0/0:0:0:0:0:54:0%:99:1E0:43:54:22:32:54 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:42 0/0:0:0:0:0:24:0%:44:1E0:43:24:3:21:25 0/0:0:0:0:0:49:0%:93:1E0:39:49:17:32:49 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:58:0%:99:1E0:42:58:25:33:58 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:52 0/0:33:1:0:1:35:2.86%:55:5E-1:43:34:14:20:36 0/0:0:0:0:0:43:0%:82:1E0:44:43:14:29:43 0/0:0:0:0:0:37:0%:70:1E0:39:37:11:26:37 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:41 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:45 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/1:46:22:9:13:37:59.46%:85:2.5665E-9:45:15:9:6:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:14 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:50:27:10:17:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:20 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:48 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:15:27:42 0/0:0:0:0:0:31:0%:59:1E0:46:31:11:20:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:10:27:37 0/0:0:0:0:0:54:0%:99:1E0:43:54:23:31:55 0/0:0:0:0:0:31:0%:59:1E0:44:31:8:23:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:45 0/0:0:0:0:0:18:0%:32:1E0:48:18:6:12:18 0/0:0:0:0:0:33:0%:63:1E0:43:33:8:25:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:41:0%:78:1E0:43:41:11:30:41 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:18 0/0:0:0:0:0:49:0%:93:1E0:40:49:16:33:49 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:22 0/0:0:0:0:0:33:0%:63:1E0:40:33:9:24:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:12:28:40 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:10:27:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:26:0%:47:1E0:39:26:7:19:27 0/0:0:0:0:0:18:0%:32:1E0:39:18:12:6:18 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:8:23:32 0/0:0:0:0:0:34:0%:63:1E0:44:33:10:23:35 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:6:17:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:7:21:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:39 0/0:0:0:0:0:53:0%:99:1E0:40:53:16:37:53 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:12:24:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:47:0%:89:1E0:41:47:19:28:47 0/0:0:0:0:0:49:0%:93:1E0:39:49:17:32:49 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:46:0%:85:1E0:39:46:18:28:46 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:32 0/0:0:0:0:0:40:0%:74:1E0:39:40:13:27:41 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:29 0/0:0:0:0:0:45:0%:85:1E0:39:45:17:28:46 0/0:0:0:0:0:37:0%:70:1E0:39:37:12:25:39 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:43 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:31 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:8:20:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:8:24:32 0/0:0:0:0:0:57:0%:99:1E0:37:57:24:33:59 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:41:0%:74:1E0:41:40:18:22:42 0/0:0:0:0:0:43:0%:82:1E0:39:43:16:27:43 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:36 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:42 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:38:0%:70:1E0:42:38:11:27:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:38 0/0:0:0:0:0:49:0%:93:1E0:39:49:14:35:50 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:32 MTB_anc 1379204 . C CG . PASS AC=1;AF=3.333e-03;AN=300;ANN=CG|frameshift_variant|HIGH|sugA_Rv1236|gene1260|transcript|Transcript_gene1260|Coding|1/1|c.280dupG|p.Val94fs|281/924|281/924|94/307||INFO_REALIGN_3_PRIME,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.1379204_1379205insG||||||,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1379204_1379205insG||||||,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1379204_1379205insG||||||;HOM=0;LOF=(sugA_Rv1236|gene1260|1|1.00);NC=0;set=filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:35:1:1:0:13:7.69%:18:5E-1:46:12:4:8:15 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:42 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:31 0/0:66:1:1:0:24:4.17%:34:5E-1:43:23:12:11:25 0/0:0:0:0:0:12:0%:21:1E0:40:12:5:7:12 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:7:22:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:16 0/0:0:0:0:0:33:0%:63:1E0:40:33:7:26:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:22 0/0:37:2:2:0:35:5.71%:47:2.4638E-1:40:33:17:16:35 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:13:0%:25:1E0:39:13:9:4:14 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:29 0/0:0:0:0:0:20:0%:36:1E0:36:20:7:13:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:7:17:25 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:39 0/0:38:2:2:0:25:8%:31:2.449E-1:41:23:11:12:25 0/0:0:0:0:0:40:0%:74:1E0:39:40:17:23:42 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:17 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:22 0/0:60:1:0:1:17:5.88%:24:5E-1:44:16:11:5:18 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:16 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:35 0/0:60:1:1:0:29:3.45%:45:5E-1:40:28:13:15:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:36 0/0:0:0:0:0:50:0%:92:1E0:40:50:19:31:52 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:34:2:2:0:42:4.76%:57:2.4699E-1:41:40:17:23:42 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:18 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:19 0/0:0:0:0:0:19:0%:37:1E0:42:19:5:14:19 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:19 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:34:1:0:1:20:5%:27:5E-1:42:19:7:12:20 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:17 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:31 0/0:37:6:6:0:39:15.38%:31:1.2702E-2:39:33:9:24:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:29 0/0:32:1:1:0:26:3.85%:38:5E-1:41:25:15:10:26 0/0:36:2:2:0:32:6.25%:40:2.4603E-1:40:30:12:18:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:36:4:4:0:29:13.79%:26:5.5981E-2:40:25:8:17:31 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:48 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:33:6:6:0:35:16.67%:25:1.2467E-2:41:30:13:17:36 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:12 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:42 0/0:0:0:0:0:24:0%:44:1E0:45:24:17:7:24 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:19 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:37:0%:70:1E0:38:37:10:27:38 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:20 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:31 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:21 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:39:1:0:1:33:3.03%:52:5E-1:38:32:16:16:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:17 0/0:0:0:0:0:17:0%:33:1E0:41:17:4:13:18 0/0:38:1:1:0:23:4.35%:34:5E-1:41:22:9:13:23 0/0:37:2:2:0:26:7.69%:30:2.451E-1:40:24:12:12:26 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:18 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:19 0/0:0:0:0:0:31:0%:59:1E0:37:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:35 0/0:37:1:1:0:25:4%:38:5E-1:39:24:9:15:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:29 0/1:36:10:10:0:45:22.22%:32:5.5766E-4:39:35:8:27:48 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:34 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:17 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:37 0/0:38:1:1:0:34:2.94%:51:5E-1:39:33:17:16:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:36:1:1:0:30:3.33%:44:5E-1:37:29:9:20:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:28 0/0:0:0:0:0:29:0%:55:1E0:37:29:8:21:32 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:19 0/0:0:0:0:0:16:0%:29:1E0:44:16:6:10:17 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:39 0/0:0:0:0:0:42:0%:77:1E0:39:42:21:21:43 0/0:0:0:0:0:14:0%:25:1E0:41:14:9:5:15 0/0:38:2:2:0:24:8.33%:27:2.4468E-1:41:22:6:16:25 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:34 0/0:0:0:0:0:34:0%:62:1E0:37:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:36:29:14:15:30 0/0:0:0:0:0:28:0%:51:1E0:35:28:6:22:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:10:24:35 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:24 0/0:30:1:1:0:34:2.94%:51:5E-1:40:33:12:21:36 0/0:0:0:0:0:26:0%:47:1E0:37:26:7:19:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:27 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:35:3:3:0:30:10%:31:1.1864E-1:38:27:13:14:32 0/0:0:0:0:0:23:0%:44:1E0:38:23:10:13:23 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:29 0/0:38:2:2:0:34:5.88%:43:2.4627E-1:40:32:13:19:35 0/0:37:2:2:0:27:7.41%:34:2.4528E-1:41:25:10:15:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:7:16:23 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:24 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:37 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:19 0/0:37:1:0:1:28:3.57%:41:5E-1:41:27:11:16:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:37 0/0:42:6:6:0:35:17.14%:25:1.238E-2:38:29:8:21:38 MTB_anc 1382848 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|corA_Rv1239c|gene1263|transcript|Transcript_gene1263|Coding|1/1|c.195C>T|p.Thr65Thr|195/1101|195/1101|65/366||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1382848G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1382848G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:46 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:21 0/0:0:0:0:0:60:0%:99:1E0:49:60:33:27:60 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:10:24:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:20:15:35 0/0:0:0:0:0:22:0%:40:1E0:49:22:8:14:22 0/0:0:0:0:0:27:0%:52:1E0:50:27:16:11:27 0/0:0:0:0:0:52:0%:96:1E0:45:52:25:27:53 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:47:0%:89:1E0:43:47:30:17:47 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:52 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:17 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:24 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:47:29:20:9:29 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:34:0%:62:1E0:42:34:9:25:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:60:1:1:0:30:3.33%:44:5E-1:42:29:17:12:32 0/0:0:0:0:0:31:0%:59:1E0:50:31:19:12:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:50 0/0:0:0:0:0:60:0%:99:1E0:47:60:24:36:61 0/0:0:0:0:0:50:0%:92:1E0:46:50:21:29:50 0/0:0:0:0:0:50:0%:92:1E0:48:50:25:25:51 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:60:1:0:1:44:2.27%:69:5E-1:45:43:18:25:44 0/0:0:0:0:0:17:0%:33:1E0:46:17:6:11:17 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:37:1:1:0:38:2.63%:58:5E-1:46:37:19:18:39 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:23:13:36 0/0:0:0:0:0:52:0%:96:1E0:43:52:28:24:52 0/0:0:0:0:0:43:0%:82:1E0:47:43:25:18:44 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 1/1:44:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:39:1:1:0:38:2.63%:58:5E-1:45:37:24:13:38 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:50 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:30:0%:55:1E0:49:30:20:10:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:42 0/0:0:0:0:0:26:0%:47:1E0:47:26:8:18:26 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:46:0%:85:1E0:48:46:17:29:46 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:20:0%:36:1E0:48:20:8:12:21 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:30 0/0:0:0:0:0:22:0%:40:1E0:52:22:16:6:23 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:55:0%:99:1E0:44:55:32:23:55 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:26 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:29 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:36 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:44 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:44 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:42 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:45 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:48 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:56:0%:99:1E0:42:56:31:25:56 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:45 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:49:0%:93:1E0:40:49:29:20:51 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:45 0/0:0:0:0:0:61:0%:99:1E0:41:61:25:36:61 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:42 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:51 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:33 0/0:0:0:0:0:48:0%:89:1E0:42:48:24:24:48 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:39 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:50 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:73:0%:99:1E0:39:73:32:41:75 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:46 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:38 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:47 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:26 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:28 0/0:0:0:0:0:47:0%:89:1E0:40:47:22:25:47 0/0:0:0:0:0:60:0%:99:1E0:45:60:29:31:60 0/0:0:0:0:0:42:0%:77:1E0:39:42:20:22:42 MTB_anc 1385430 . A G . PASS AC=58;AF=0.203;AN=286;ANN=G|synonymous_variant|LOW|PE_PGRS23_Rv1243c|gene1267|transcript|Transcript_gene1267|Coding|1/1|c.1248T>C|p.Val416Val|1248/1689|1248/1689|416/562||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1385430A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1385430A>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:13 0/0:0:0:0:0:18:0%:32:1E0:38:18:4:14:18 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:11 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:15 1/1:41:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:12 0/0:0:0:0:0:9:0%:18:1E0:42:9:2:7:9 0/0:0:0:0:0:24:0%:44:1E0:38:24:5:19:25 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:9 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:26 1/1:41:8:3:5:8:100%:41:7.77E-5:0:0:0:0:11 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:15 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:10 0/0:0:0:0:0:15:0%:29:1E0:35:15:8:7:15 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:15 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:28 0/0:0:0:0:0:8:0%:14:1E0:40:8:6:2:9 0/0:0:0:0:0:15:0%:29:1E0:37:15:9:6:18 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:26 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:21 0/0:32:1:1:0:24:4.17%:34:5E-1:41:23:11:12:25 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:23 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:25 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:12 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:22 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:19 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:33 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:27 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:19 0/0:0:0:0:0:11:0%:22:1E0:37:11:6:5:12 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:17 0/0:0:0:0:0:26:0%:47:1E0:38:26:7:19:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:30 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:30 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:30 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:11:0%:22:1E0:45:11:4:7:11 0/0:0:0:0:0:11:0%:22:1E0:43:11:8:3:14 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:29 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:14 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:15 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:18 0/0:0:0:0:0:14:0%:25:1E0:40:14:5:9:15 0/0:0:0:0:0:7:0%:14:1E0:40:7:5:2:7 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:31 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:39:7:4:3:9 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:21 0/0:0:0:0:0:10:0%:17:1E0:43:10:5:5:10 0/0:0:0:0:0:16:0%:29:1E0:44:16:12:4:16 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:14:0%:25:1E0:39:14:4:10:15 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:15 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:28 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:13 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:14 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:31 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:28 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 0/0:0:0:0:0:14:0%:25:1E0:35:14:6:8:14 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:17 0/0:0:0:0:0:12:0%:21:1E0:40:12:5:7:13 0/0:0:0:0:0:12:0%:21:1E0:46:12:6:6:12 0/0:0:0:0:0:22:0%:40:1E0:36:22:12:10:24 0/0:37:1:1:0:17:5.88%:24:5E-1:36:16:10:6:18 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:22 0/0:0:0:0:0:9:0%:18:1E0:35:9:6:3:9 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:16 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:23 0/0:0:0:0:0:16:0%:29:1E0:36:16:3:13:18 0/0:0:0:0:0:30:0%:55:1E0:36:30:16:14:32 0/0:0:0:0:0:29:0%:55:1E0:38:29:9:20:30 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:17 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:20 0/0:0:0:0:0:20:0%:36:1E0:35:20:7:13:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:18:0%:32:1E0:38:18:3:15:20 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:20 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:20 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:19 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:25 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:23 0/0:0:0:0:0:19:0%:37:1E0:35:19:8:11:19 1/1:34:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:26 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:18:0%:32:1E0:35:18:4:14:20 0/0:0:0:0:0:21:0%:40:1E0:35:21:7:14:22 0/0:0:0:0:0:12:0%:21:1E0:35:12:2:10:13 0/0:0:0:0:0:19:0%:37:1E0:37:19:12:7:21 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:16 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:18 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:13 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 0/0:0:0:0:0:13:0%:25:1E0:35:13:4:9:13 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:14:0%:25:1E0:35:14:4:10:16 0/0:0:0:0:0:9:0%:18:1E0:34:9:4:5:10 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:12 0/0:0:0:0:0:7:0%:14:1E0:37:7:3:4:9 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:19:0%:37:1E0:37:19:15:4:19 0/0:0:0:0:0:16:0%:29:1E0:40:16:5:11:17 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:19 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:16 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:11 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:19 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:15 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:32 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:9 MTB_anc 1390763 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1248c_Rv1248c|gene1272|transcript|Transcript_gene1272|Coding|1/1|c.2290A>G|p.Met764Val|2290/3696|2290/3696|764/1231||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1390763T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1390763T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:51:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:51:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:32:14:18:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:46:23:12:11:24:95.83%:99:7.7525E-13:30:1:0:1:24 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:66:34:32:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:17:14:32:96.88%:99:1.8007E-17:39:1:1:0:32 1/1:51:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:41:31:10:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:33:16:17:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:16:19:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 1393694 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1249c_Rv1249c|gene1273|transcript|Transcript_gene1273|Coding|1/1|c.289G>T|p.Ala97Ser|289/789|289/789|97/262||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1393694C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1393694C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:48:30:18:48:100%:99:1.554E-28:0:0:0:0:50 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:28:27:1:29:96.55%:99:9.9776E-16:38:1:1:0:30 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:25 1/1:37:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:29:20:9:30:96.67%:99:2.6212E-16:38:1:0:1:32 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:37:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:37:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:35:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:37:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:28 1/1:38:36:28:8:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:37:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:49:31:18:49:100%:99:3.925E-29:0:0:0:0:52 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:39:38:30:8:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:34:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:34:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:41:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:24:21:3:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:15 1/1:37:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:59 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:24 1/1:35:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:34:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:33:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:25 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:43 1/1:34:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:35:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:26 MTB_anc 1393994 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv1249c_Rv1249c-Rv1250_Rv1250|gene1273-gene1274|intergenic_region|gene1273-gene1274|||n.1393994C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:38:14:24:39:97.44%:99:1.4697E-21:39:1:0:1:39 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:12:23:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:40:10:30:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:52:15:37:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:49:18:31:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:7:29:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:44:19:25:45:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:13:17:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:14:21:36:97.22%:99:8.3613E-20:38:1:0:1:36 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:43:11:32:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:49:18:31:49:100%:99:3.925E-29:0:0:0:0:52 1/1:38:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:49:15:34:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:52:16:36:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 MTB_anc 1395010 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1250_Rv1250|gene1274|transcript|Transcript_gene1274|Coding|1/1|c.832G>A|p.Gly278Arg|832/1740|832/1740|278/579||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1395010G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1395010G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:49:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:69:33:36:69:100%:99:4.233E-41:0:0:0:0:70 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:59:22:37:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:40:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:40:21:19:41:97.56%:99:9.8874E-23:60:1:0:1:41 1/1:42:31:12:19:33:96.88%:99:1.8007E-17:39:1:0:1:33 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 1395229 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv1250_Rv1250|gene1274|transcript|Transcript_gene1274|Coding|1/1|c.1051A>C|p.Thr351Pro|1051/1740|1051/1740|351/579||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1395229A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1395229A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:23:0%:44:1E0:55:23:9:14:24 0/0:0:0:0:0:49:0%:93:1E0:47:49:21:28:49 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:36 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:49:36:20:16:38 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:17 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:43 0/0:0:0:0:0:21:0%:40:1E0:47:21:14:7:21 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:33 0/0:0:0:0:0:52:0%:96:1E0:45:52:22:30:52 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:36 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:19:0%:37:1E0:51:19:10:9:19 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:19 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:47 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:66:0%:99:1E0:45:66:23:43:67 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:35 0/0:0:0:0:0:49:0%:93:1E0:46:49:20:29:49 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:19 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:45 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:40 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:42 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:38:0%:70:1E0:45:38:13:25:39 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:48 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:40 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:41:0%:78:1E0:49:41:21:20:41 0/0:0:0:0:0:29:0%:55:1E0:50:29:15:14:29 0/0:0:0:0:0:12:0%:21:1E0:46:12:5:7:12 0/0:0:0:0:0:38:0%:70:1E0:49:38:23:15:38 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:49 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 1/1:46:24:10:14:25:96%:99:2.0568E-13:60:1:0:1:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:19:0%:37:1E0:52:19:11:8:20 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:53 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:46 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:40:0%:74:1E0:44:40:26:14:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:33:0%:63:1E0:49:33:12:21:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:19:8:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:18 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:45 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:24 0/0:0:0:0:0:56:0%:99:1E0:45:56:18:38:56 0/0:0:0:0:0:49:0%:93:1E0:43:49:20:29:49 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:44 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:37 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:43:0%:82:1E0:38:43:24:19:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:37 0/0:0:0:0:0:31:0%:59:1E0:39:31:22:9:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:23:10:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:49:0%:93:1E0:41:49:21:28:50 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:28 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:21 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:39 0/0:0:0:0:0:62:0%:99:1E0:42:62:26:36:62 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 MTB_anc 1396243 . C G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv1251c_Rv1251c|gene1275|transcript|Transcript_gene1275|Coding|1/1|c.2998G>C|p.Ala1000Pro|2998/3420|2998/3420|1000/1139||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1396243C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1396243C>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:50 0/0:0:0:0:0:18:0%:32:1E0:50:18:10:8:18 0/0:0:0:0:0:46:0%:85:1E0:45:46:19:27:48 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:26 0/0:0:0:0:0:13:0%:25:1E0:40:13:6:7:13 0/0:0:0:0:0:12:0%:21:1E0:47:12:7:5:12 0/0:0:0:0:0:22:0%:40:1E0:51:22:11:11:23 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:6:18:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:39 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:51 0/0:0:0:0:0:9:0%:18:1E0:43:9:3:6:10 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:21 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:30 0/0:0:0:0:0:44:0%:81:1E0:41:44:30:14:46 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:50 0/0:0:0:0:0:17:0%:33:1E0:49:17:10:7:19 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:15:0%:29:1E0:46:15:6:9:15 0/0:0:0:0:0:22:0%:40:1E0:40:22:6:16:22 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:19 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:57:0%:99:1E0:47:57:27:30:57 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:43 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:41 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:37 0/0:0:0:0:0:49:0%:93:1E0:40:49:22:27:50 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:48 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:53:0%:99:1E0:42:53:33:20:55 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:21 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:55:0%:99:1E0:40:55:24:31:56 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:48 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:38 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:49:0%:93:1E0:40:49:24:25:51 0/0:0:0:0:0:23:0%:44:1E0:47:23:7:16:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:66:0%:99:1E0:43:66:32:34:68 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:18:0%:32:1E0:43:18:6:12:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:52:0%:96:1E0:40:52:23:29:54 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:15 0/0:0:0:0:0:31:0%:59:1E0:51:31:16:15:31 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:48:0%:89:1E0:38:48:27:21:50 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:28 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:32 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:21 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:41 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:35 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:30 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:21 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:25 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:35 0/0:0:0:0:0:18:0%:32:1E0:41:18:15:3:22 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:35 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:30 0/0:0:0:0:0:67:0%:99:1E0:41:67:29:38:70 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:47 0/1:44:13:9:4:25:52%:48:1.4654E-5:46:12:9:3:27 0/0:0:0:0:0:16:0%:29:1E0:42:16:10:6:16 0/0:0:0:0:0:45:0%:85:1E0:38:45:26:19:48 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:50 0/0:0:0:0:0:53:0%:99:1E0:37:53:25:28:54 0/0:0:0:0:0:35:0%:67:1E0:38:35:20:15:39 0/0:0:0:0:0:42:0%:77:1E0:38:42:24:18:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:35 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:32 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:43 0/0:0:0:0:0:36:0%:66:1E0:38:36:21:15:39 0/0:0:0:0:0:22:0%:40:1E0:35:22:14:8:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:8:17:26 0/0:0:0:0:0:53:0%:99:1E0:38:53:16:37:56 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:50 0/0:0:0:0:0:39:0%:74:1E0:39:39:23:16:40 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:38 0/0:0:0:0:0:52:0%:96:1E0:42:52:23:29:53 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:46 0/0:0:0:0:0:48:0%:89:1E0:39:48:19:29:48 MTB_anc 1396311 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1251c_Rv1251c|gene1275|transcript|Transcript_gene1275|Coding|1/1|c.2930C>A|p.Pro977His|2930/3420|2930/3420|977/1139||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1396311G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1396311G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:52 1/1:52:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:60:36:24:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:26:13:13:27:96.3%:99:1.4382E-14:38:1:0:1:27 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:60 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:44:42:24:18:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:42:16:26:43:97.67%:99:6.6289E-24:60:1:1:0:50 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:35:20:15:36:97.22%:99:8.3613E-20:39:1:1:0:37 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:39:64:21:43:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:41:49:18:31:49:100%:99:3.925E-29:0:0:0:0:51 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:36:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:38:37:16:21:38:97.37%:99:5.7269E-22:0:0:0:0:41 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:36:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:48:19:29:48:100%:99:1.554E-28:0:0:0:0:51 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:15:17:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:40:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:46 MTB_anc 1397201 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv1251c_Rv1251c|gene1275|transcript|Transcript_gene1275|Coding|1/1|c.2040C>T|p.Asn680Asn|2040/3420|2040/3420|680/1139||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1397201G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1397201G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:57:38:19:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:45:27:18:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:39:30:9:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:25:5:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:52:36:16:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:50:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:18:12:6:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:58:42:16:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:40:31:9:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 1400396 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|deaD_Rv1253|gene1277|transcript|Transcript_gene1277|Coding|1/1|c.427G>A|p.Val143Met|427/1692|427/1692|143/563||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1400396G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1400396G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:53:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:13:14:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:32:13:19:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:39:34:16:18:35:97.14%:99:3.2089E-19:36:1:0:1:36 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 1402321 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1254_Rv1254|gene1278|transcript|Transcript_gene1278|Coding|1/1|c.664G>A|p.Ala222Thr|664/1152|664/1152|222/383||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1402321G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1402321G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:16:7:9:17:94.12%:81:7.7134E-9:60:1:1:0:17 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:15 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:60:26:34:60:100%:99:1.035E-35:0:0:0:0:61 1/1:39:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:37:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:37:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:43:16:27:44:97.73%:99:1.7144E-24:46:1:0:1:45 1/1:38:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:29 MTB_anc 1402917 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv1255c_Rv1255c|gene1279|transcript|Transcript_gene1279|Coding|1/1|c.470T>C|p.Val157Ala|470/609|470/609|157/202||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1402917A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1402917A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:44 0/0:0:0:0:0:27:0%:52:1E0:49:27:18:9:27 0/0:0:0:0:0:55:0%:99:1E0:44:55:27:28:56 0/0:0:0:0:0:15:0%:29:1E0:45:15:5:10:17 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:37 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:49:27:9:18:28 0/0:0:0:0:0:51:0%:97:1E0:41:51:23:28:54 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:40 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:22 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:19 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:44 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:44 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:23 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:33:1:1:0:45:2.22%:73:5E-1:44:44:21:23:46 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:38 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:64:0%:99:1E0:46:64:29:35:67 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:33 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:33 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:13:0%:25:1E0:49:13:6:7:13 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:21:8:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:28:16:44 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:38:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:43:0%:82:1E0:45:43:25:18:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:42 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:41 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:46 0/0:0:0:0:0:46:0%:85:1E0:45:46:17:29:47 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:25 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:45 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:16 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:36 0/1:49:25:14:11:30:83.33%:99:2.745E-12:47:5:2:3:30 0/0:0:0:0:0:16:0%:29:1E0:50:16:10:6:17 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:23 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:52 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:36 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:32 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:28 0/0:0:0:0:0:49:0%:93:1E0:40:49:32:17:49 0/0:0:0:0:0:29:0%:55:1E0:39:29:19:10:29 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:48 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:28 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:21 0/0:38:1:1:0:14:7.14%:17:5E-1:39:13:6:7:15 0/0:0:0:0:0:25:0%:48:1E0:43:25:6:19:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:43 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:7:21:29 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:18 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:23 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:40 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:44 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:17:13:31 0/0:0:0:0:0:61:0%:99:1E0:42:61:29:32:61 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:43 0/0:0:0:0:0:24:0%:44:1E0:41:24:7:17:25 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:25 0/0:0:0:0:0:46:0%:85:1E0:38:46:17:29:49 0/0:0:0:0:0:45:0%:85:1E0:39:45:24:21:47 0/0:0:0:0:0:41:0%:78:1E0:36:41:20:21:43 0/0:0:0:0:0:45:0%:85:1E0:36:45:22:23:48 0/0:0:0:0:0:39:0%:74:1E0:37:39:26:13:42 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:28 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:50 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:37 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:44 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:45 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:58:0%:99:1E0:37:58:24:34:59 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:40 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:51 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:43 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:49 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:40 0/0:0:0:0:0:46:0%:85:1E0:39:46:29:17:46 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 MTB_anc 1406556 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|stop_gained|HIGH|Rv1258c_Rv1258c|gene1282|transcript|Transcript_gene1282|Coding|1/1|c.785G>A|p.Trp262*|785/1260|785/1260|262/419||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1406556C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1406556C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|streptomycin_PAS|||n.1406556C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:34 0/0:0:0:0:0:20:0%:36:1E0:52:20:10:10:20 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:43 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:22 0/0:0:0:0:0:47:0%:89:1E0:48:47:21:26:47 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:23 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:41 0/0:0:0:0:0:39:0%:74:1E0:49:39:16:23:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:19 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:39 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:22 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:17 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:38 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:33:0%:63:1E0:50:33:18:15:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:37 0/0:0:0:0:0:33:0%:63:1E0:42:33:11:22:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:36 0/0:0:0:0:0:62:0%:99:1E0:44:62:24:38:65 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:46 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:16:0%:29:1E0:48:16:9:7:17 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:33 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:15 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:37:1:1:0:34:2.94%:51:5E-1:44:33:16:17:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:51:0%:97:1E0:47:51:27:24:51 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:23 0/0:0:0:0:0:45:0%:85:1E0:47:45:23:22:45 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:29 0/0:0:0:0:0:22:0%:40:1E0:57:22:9:13:22 0/0:0:0:0:0:41:0%:78:1E0:45:41:15:26:41 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:11:19:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:18:0%:32:1E0:45:18:13:5:18 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:23 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:44 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:26:0%:47:1E0:47:26:6:20:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:23 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:27:0%:52:1E0:51:27:12:15:27 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:49 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:24 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:20 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:44 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:52 0/0:0:0:0:0:57:0%:99:1E0:42:57:32:25:59 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:18:0%:32:1E0:39:18:10:8:18 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:44 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:37 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:23 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:60:1:0:1:26:3.85%:38:5E-1:39:25:10:15:26 0/0:0:0:0:0:47:0%:89:1E0:40:47:20:27:48 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:44 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 MTB_anc 1410062 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1262c_Rv1262c|gene1286|transcript|Transcript_gene1286|Coding|1/1|c.311G>C|p.Arg104Pro|311/435|311/435|104/144||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1410062C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1410062C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:42:21:21:43:97.67%:99:6.6289E-24:38:1:1:0:43 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:38:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:61:33:28:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 1410471 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|amiB2_Rv1263|gene1287|transcript|Transcript_gene1287|Coding|1/1|c.41A>C|p.Gln14Pro|41/1389|41/1389|14/462||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1410471A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1410471A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:55 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:19:7:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:9:19:28 0/0:0:0:0:0:26:0%:47:1E0:52:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:29 0/0:0:0:0:0:32:0%:59:1E0:51:32:14:18:32 0/0:0:0:0:0:33:0%:63:1E0:51:33:20:13:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:28 0/0:0:0:0:0:48:0%:89:1E0:46:48:22:26:50 0/0:0:0:0:0:24:0%:44:1E0:51:24:14:10:25 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:46:0%:85:1E0:47:46:22:24:46 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:34 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:48:0%:89:1E0:45:48:31:17:48 0/0:0:0:0:0:15:0%:29:1E0:44:15:4:11:15 0/0:0:0:0:0:45:0%:85:1E0:45:45:18:27:45 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:60:1:0:1:25:4%:38:5E-1:50:24:13:11:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:25:0%:48:1E0:51:25:15:10:25 0/0:37:1:0:1:20:5%:27:5E-1:49:19:12:7:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:60:1:1:0:32:3.12%:48:5E-1:51:31:14:17:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:60:1:0:1:37:2.7%:59:5E-1:46:36:20:16:37 0/0:0:0:0:0:58:0%:99:1E0:49:58:23:35:58 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:43 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:52 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:33 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:47 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:38:1:1:0:42:2.38%:66:5E-1:44:41:22:19:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:45 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:45 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:69:0%:99:1E0:44:69:35:34:71 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:50:0%:92:1E0:46:50:24:26:50 0/0:0:0:0:0:37:0%:70:1E0:50:37:22:15:38 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:53:0%:99:1E0:47:53:23:30:53 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:41 0/0:0:0:0:0:24:0%:44:1E0:50:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:52:26:14:12:26 0/0:60:1:0:1:42:2.38%:66:5E-1:46:41:20:21:43 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:30 0/0:0:0:0:0:19:0%:37:1E0:54:19:11:8:19 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 0/0:0:0:0:0:59:0%:99:1E0:40:59:26:33:60 0/0:0:0:0:0:26:0%:47:1E0:46:26:8:18:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:43 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:33 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:37 0/0:0:0:0:0:58:0%:99:1E0:44:58:28:30:59 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:20:10:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:23 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:37 0/0:0:0:0:0:37:0%:70:1E0:47:37:27:10:38 0/0:0:0:0:0:36:0%:66:1E0:49:36:14:22:36 0/0:0:0:0:0:33:0%:63:1E0:50:33:15:18:35 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:56 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:49 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:26 0/0:0:0:0:0:19:0%:37:1E0:44:19:13:6:19 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:40 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:40 0/0:0:0:0:0:36:0%:66:1E0:48:36:21:15:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:8:18:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:15 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:29 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:49 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:15:25:40 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:56:0%:99:1E0:44:55:29:26:56 0/0:0:0:0:0:68:0%:99:1E0:41:68:31:37:69 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:42 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:32 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:43 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:35 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:43 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:33 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:41 0/0:0:0:0:0:42:0%:77:1E0:39:42:21:21:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:38:1:0:1:59:1.69%:98:5E-1:40:58:25:33:60 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:44 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:18 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:35 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:17 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:49:0%:93:1E0:44:49:24:25:50 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:50 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 MTB_anc 1412406 . G T . PASS AC=4;AF=0.013;AN=300;ANN=T|synonymous_variant|LOW|Rv1264_Rv1264|gene1288|transcript|Transcript_gene1288|Coding|1/1|c.513G>T|p.Val171Val|513/1194|513/1194|171/397||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1412406G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1412406G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:60:1:1:0:10:10%:11:5E-1:52:9:3:6:10 0/0:0:0:0:0:54:0%:99:1E0:45:54:27:27:54 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:21 0/0:60:1:1:0:25:4%:38:5E-1:43:24:13:11:25 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:32 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:49:35:13:22:36 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:47 0/0:0:0:0:0:9:0%:18:1E0:49:9:7:2:9 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:47 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:30 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:34 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:51 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:27:0%:52:1E0:46:27:8:19:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:26:15:42 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:51 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:29 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:46 0/0:0:0:0:0:46:0%:85:1E0:44:46:14:32:46 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:47 0/0:60:1:1:0:36:2.78%:55:5E-1:45:35:22:13:36 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:43 0/0:0:0:0:0:43:0%:82:1E0:39:43:17:26:44 0/0:33:1:1:0:50:2%:80:5E-1:42:49:27:22:52 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:60:1:1:0:31:3.23%:44:5E-1:43:29:13:16:32 0/0:0:0:0:0:52:0%:96:1E0:41:52:25:27:53 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:60:0%:99:1E0:46:60:27:33:60 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:39:1:1:0:35:2.86%:55:5E-1:44:34:17:17:37 0/0:0:0:0:0:42:0%:77:1E0:54:42:19:23:42 0/0:60:1:1:0:18:5.56%:24:5E-1:43:17:12:5:18 0/0:0:0:0:0:34:0%:62:1E0:50:34:19:15:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:34 0/0:0:0:0:0:32:0%:59:1E0:51:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:27:16:43 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:45 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:37:1:1:0:27:3.7%:41:5E-1:48:26:15:11:28 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:17 0/0:0:0:0:0:32:0%:59:1E0:48:32:22:10:32 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:47:0%:89:1E0:38:47:24:23:48 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:41 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:36:0%:66:1E0:47:36:14:22:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:60:1:1:0:46:2.17%:73:5E-1:43:45:26:19:47 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:16 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:40 0/0:0:0:0:0:23:0%:44:1E0:39:23:9:14:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 0/0:0:0:0:0:55:0%:99:1E0:43:55:28:27:55 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:21 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:29 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:34:0%:62:1E0:39:34:24:10:35 0/0:0:0:0:0:39:0%:74:1E0:38:39:20:19:40 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:45 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:51 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:41 0/0:0:0:0:0:33:0%:63:1E0:39:33:12:21:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:33:1:0:1:46:2.17%:73:5E-1:38:45:21:24:48 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:40 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:44 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:31 0/0:0:0:0:0:17:0%:33:1E0:44:17:13:4:17 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:52 0/0:0:0:0:0:48:0%:89:1E0:43:48:31:17:49 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:33 MTB_anc 1417554 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|ethambutol|||n.1417554C>G||||||,G|intergenic_region|MODIFIER|embR_Rv1267c-Rv1268c_Rv1268c|gene1292-gene1293|intergenic_region|gene1292-gene1293|||n.1417554C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:26:14:12:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:50:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:64:38:26:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 MTB_anc 1424699 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|lprB_Rv1274|gene1299|transcript|Transcript_gene1299|Coding|1/1|c.503C>T|p.Pro168Leu|503/558|503/558|168/185||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1424699C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1424699C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:49:28:21:49:100%:99:3.925E-29:0:0:0:0:52 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:32 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:40:32:8:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:36:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:36:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:36:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:36:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:47:25:22:48:97.92%:99:7.6145E-27:38:1:1:0:49 1/1:36:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:38:31:7:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:36:36:29:7:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:36:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:34:27:7:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:32:26:6:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:39:31:8:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:24 MTB_anc 1426482 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv1277_Rv1277|gene1302|transcript|Transcript_gene1302|Coding|1/1|c.319A>G|p.Met107Val|319/1254|319/1254|107/417||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1426482A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1426482A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:42:52:22:30:52 0/0:0:0:0:0:16:0%:29:1E0:49:16:10:6:16 0/0:0:0:0:0:46:0%:85:1E0:45:46:15:31:47 0/0:0:0:0:0:28:0%:51:1E0:48:28:9:19:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:39 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:39:0%:74:1E0:51:39:16:23:39 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:56:0%:99:1E0:42:56:27:29:56 0/0:0:0:0:0:15:0%:29:1E0:50:15:6:9:15 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:45 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:5:18:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:60:0%:99:1E0:45:60:30:30:62 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:41 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:25 0/0:0:0:0:0:33:0%:63:1E0:50:33:9:24:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:45 0/0:0:0:0:0:48:0%:89:1E0:49:48:25:23:48 0/0:0:0:0:0:46:0%:85:1E0:47:46:22:24:46 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:43:0%:82:1E0:47:43:19:24:43 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:46:38:21:17:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:48 0/0:0:0:0:0:44:0%:81:1E0:46:44:26:18:44 0/0:0:0:0:0:13:0%:25:1E0:49:13:6:7:14 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:42 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:22:10:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:52:0%:96:1E0:42:52:20:32:52 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:38 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:12:24:36 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:47 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:45 0/0:0:0:0:0:56:0%:99:1E0:46:56:20:36:56 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:36:0%:66:1E0:50:36:18:18:36 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:16 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:18:0%:32:1E0:51:18:11:7:18 0/0:0:0:0:0:31:0%:59:1E0:50:31:18:13:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:38 0/0:0:0:0:0:24:0%:44:1E0:45:24:6:18:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:11:23:35 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:48 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:59:0%:99:1E0:42:59:32:27:59 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:60:0%:99:1E0:41:60:25:35:60 0/0:0:0:0:0:40:0%:74:1E0:44:40:14:26:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:47:0%:89:1E0:41:47:30:17:47 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:32 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:45:0%:85:1E0:44:45:17:28:45 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:38:1:1:0:27:3.7%:41:5E-1:44:26:11:15:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:34 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:46 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:65:0%:99:1E0:45:65:28:37:66 0/0:0:0:0:0:53:0%:99:1E0:43:53:25:28:53 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:50:0%:92:1E0:39:50:22:28:50 0/0:0:0:0:0:55:0%:99:1E0:42:55:23:32:55 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:50 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:41 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:52 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:35 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:52 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:41 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:54 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:48 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:65:0%:99:1E0:38:65:33:32:65 0/0:0:0:0:0:54:0%:99:1E0:43:54:24:30:54 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:26:0%:47:1E0:38:26:7:19:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:43 0/0:0:0:0:0:46:0%:85:1E0:44:46:17:29:47 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:48 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:51:0%:97:1E0:45:51:24:27:51 0/0:0:0:0:0:53:0%:99:1E0:42:53:26:27:54 MTB_anc 1433812 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|oppD_Rv1281c|gene1306|transcript|Transcript_gene1306|Coding|1/1|c.1460G>C|p.Gly487Ala|1460/1839|1460/1839|487/612||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1433812C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1433812C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:22:15:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:43:21:22:44:97.73%:99:1.5066E-25:0:0:0:0:46 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:30:13:17:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:31:14:17:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:49:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:36:15:21:37:97.3%:99:2.1762E-20:34:1:1:0:37 1/1:44:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:49:23:26:49:100%:99:3.925E-29:0:0:0:0:53 1/1:37:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:33:17:16:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 MTB_anc 1437912 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|cysD_Rv1285|gene1310|transcript|Transcript_gene1310|Coding|1/1|c.4G>C|p.Ala2Pro|4/999|4/999|2/332||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1437912G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1437912G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:18:0%:32:1E0:46:18:7:11:18 0/0:0:0:0:0:52:0%:96:1E0:45:52:22:30:52 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:9:22:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:38 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:35 0/0:0:0:0:0:34:0%:62:1E0:48:34:9:25:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 0/0:0:0:0:0:23:0%:44:1E0:53:23:12:11:24 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:49 0/0:60:1:0:1:27:3.7%:41:5E-1:44:26:15:11:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:51 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 0/0:0:0:0:0:46:0%:85:1E0:44:46:18:28:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:22 0/0:0:0:0:0:15:0%:29:1E0:50:15:9:6:15 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:60:1:1:0:29:3.45%:45:5E-1:49:28:15:13:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:41:0%:78:1E0:47:41:15:26:41 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:71:0%:99:1E0:47:71:34:37:71 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:45 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:60:1:1:0:30:3.33%:45:5E-1:43:28:8:20:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:33 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:46:0%:85:1E0:47:46:22:24:48 0/0:0:0:0:0:54:0%:99:1E0:48:54:29:25:54 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:35:1:1:0:41:2.44%:66:5E-1:43:40:16:24:41 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:48:0%:89:1E0:48:48:29:19:48 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:61:0%:99:1E0:44:61:31:30:61 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:45 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:43 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:47 0/0:0:0:0:0:53:0%:99:1E0:47:53:24:29:55 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:36 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:35:0%:67:1E0:47:35:20:15:35 0/0:0:0:0:0:41:0%:78:1E0:50:41:14:27:41 0/0:0:0:0:0:11:0%:22:1E0:49:11:8:3:11 0/0:0:0:0:0:36:0%:66:1E0:50:36:14:22:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:15:25:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:24 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:41:0%:78:1E0:45:41:14:27:41 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:44 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:27:0%:52:1E0:45:27:18:9:28 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:44 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:42 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:38:1:0:1:45:2.22%:73:5E-1:42:44:21:23:47 0/0:36:1:1:0:48:2.08%:76:5E-1:44:47:27:20:48 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:31:0%:59:1E0:39:31:7:24:31 0/0:0:0:0:0:27:0%:52:1E0:49:27:9:18:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:24 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:47 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:37:1:1:0:40:2.5%:62:5E-1:43:39:16:23:40 0/0:0:0:0:0:49:0%:93:1E0:42:49:17:32:52 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:42 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:54:0%:99:1E0:42:54:24:30:55 0/0:0:0:0:0:47:0%:89:1E0:42:47:30:17:48 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:60:1:0:1:29:3.45%:45:5E-1:42:28:13:15:29 0/0:0:0:0:0:53:0%:99:1E0:40:53:24:29:57 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:40 0/0:0:0:0:0:59:0%:99:1E0:45:59:28:31:60 0/0:0:0:0:0:53:0%:99:1E0:40:53:24:29:56 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:44 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:35 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:51 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:39:1:0:1:60:1.67%:98:5E-1:42:59:32:27:60 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:45 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:42 0/0:0:0:0:0:51:0%:97:1E0:40:51:21:30:51 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:39:1:0:1:40:2.5%:62:5E-1:44:39:26:13:41 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:42 0/0:60:1:0:1:25:4%:38:5E-1:41:24:6:18:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:46:0%:85:1E0:43:46:16:30:48 0/0:0:0:0:0:58:0%:99:1E0:42:58:25:33:58 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:48 MTB_anc 1441545 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv1288_Rv1288|gene1313|transcript|Transcript_gene1313|Coding|1/1|c.198G>A|p.Ala66Ala|198/1371|198/1371|66/456||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1441545G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1441545G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:39:1:1:0:43:2.33%:70:5E-1:42:42:19:23:44 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:39:1:1:0:21:4.76%:31:5E-1:43:20:15:5:21 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:22 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:15:0%:29:1E0:46:15:5:10:15 0/0:0:0:0:0:27:0%:52:1E0:47:27:7:20:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:45 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:15 0/0:0:0:0:0:50:0%:92:1E0:42:50:19:31:52 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:37 0/0:0:0:0:0:24:0%:44:1E0:44:24:16:8:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:44 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:31:0%:59:1E0:38:31:20:11:32 0/0:39:1:1:0:32:3.12%:48:5E-1:40:31:11:20:32 0/0:0:0:0:0:18:0%:32:1E0:44:18:12:6:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:41 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:49:2:1:1:23:8.7%:28:2.4444E-1:45:21:7:14:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:48:0%:89:1E0:43:48:29:19:49 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:17:0%:33:1E0:42:17:12:5:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:38 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:18 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:42 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:43 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:18 0/0:38:1:1:0:32:3.12%:48:5E-1:41:31:19:12:33 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:23 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:34 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:26 0/0:37:1:1:0:38:2.63%:58:5E-1:41:37:19:18:41 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:33 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:44 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:26 0/0:0:0:0:0:11:0%:22:1E0:51:11:5:6:11 0/0:0:0:0:0:11:0%:22:1E0:45:11:4:7:11 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:12:6:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:38:1:0:1:27:3.7%:41:5E-1:39:26:14:12:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:21 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:32 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:23:10:34 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:23 0/0:37:1:0:1:23:4.35%:34:5E-1:40:22:12:10:23 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:39:1:1:0:15:6.67%:21:5E-1:46:14:6:8:15 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:34 0/0:39:1:0:1:28:3.57%:41:5E-1:47:27:15:12:28 0/0:0:0:0:0:23:0%:44:1E0:46:23:7:16:24 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:26 0/0:0:0:0:0:41:0%:78:1E0:38:41:24:17:43 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:33 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:19 0/0:0:0:0:0:16:0%:29:1E0:39:16:4:12:17 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:33 0/0:37:1:1:0:29:3.45%:45:5E-1:38:28:10:18:30 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:20 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:26 0/0:0:0:0:0:20:0%:36:1E0:37:20:14:6:22 0/0:0:0:0:0:11:0%:22:1E0:42:11:7:4:11 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:28 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:25 0/0:39:1:1:0:27:3.7%:41:5E-1:40:26:15:11:28 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:22 0/0:39:1:1:0:37:2.7%:59:5E-1:42:36:17:19:37 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:21 0/0:39:1:1:0:37:2.7%:59:5E-1:36:36:16:20:38 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:25 0/1:40:11:8:3:17:64.71%:43:4.3258E-5:36:6:4:2:17 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:23 0/0:37:3:3:0:44:6.82%:53:1.2069E-1:36:41:21:20:50 0/1:37:18:10:8:27:66.67%:73:4.8354E-8:41:9:6:3:28 0/0:38:1:1:0:27:3.7%:41:5E-1:39:26:11:15:28 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:16 0/0:38:2:2:0:41:4.88%:57:2.4691E-1:35:39:12:27:45 0/0:34:1:1:0:27:3.7%:41:5E-1:36:26:13:13:29 0/0:39:1:1:0:35:2.86%:55:5E-1:38:34:17:17:38 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:30 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:34 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:31 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:33 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:25 0/0:34:1:1:0:33:3.03%:52:5E-1:36:32:12:20:37 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:20 0/0:0:0:0:0:31:0%:59:1E0:35:31:14:17:32 0/0:37:1:1:0:23:4.35%:34:5E-1:38:22:10:12:26 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:18 0/0:0:0:0:0:40:0%:74:1E0:38:40:24:16:45 0/0:39:1:1:0:34:2.94%:51:5E-1:39:33:17:16:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:39 0/0:39:1:1:0:48:2.08%:76:5E-1:41:47:18:29:48 0/0:39:1:1:0:27:3.7%:41:5E-1:39:26:14:12:27 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:25 0/0:39:1:1:0:21:4.76%:31:5E-1:37:20:12:8:23 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:44 0/0:0:0:0:0:34:0%:62:1E0:36:34:21:13:37 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:27 0/0:39:1:1:0:38:2.63%:58:5E-1:40:37:16:21:40 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:29 0/0:0:0:0:0:40:0%:74:1E0:37:40:15:25:43 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 MTB_anc 1441551 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv1288_Rv1288|gene1313|transcript|Transcript_gene1313|Coding|1/1|c.204G>T|p.Ala68Ala|204/1371|204/1371|68/456||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1441551G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1441551G>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:34:1:1:0:38:2.63%:58:5E-1:41:37:15:22:43 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:19 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:39 0/0:38:1:1:0:22:4.55%:31:5E-1:44:21:15:6:22 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:22 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:34 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:31 0/0:0:0:0:0:13:0%:25:1E0:48:13:4:9:14 0/0:0:0:0:0:28:0%:51:1E0:46:28:7:21:28 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:38:1:1:0:28:3.57%:41:5E-1:47:27:16:11:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:44 0/0:0:0:0:0:15:0%:29:1E0:43:15:6:9:15 0/0:0:0:0:0:52:0%:96:1E0:41:52:21:31:54 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:38 0/0:0:0:0:0:23:0%:44:1E0:44:23:16:7:25 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:21 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:20 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:44 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:21:10:33 0/0:38:1:1:0:29:3.45%:45:5E-1:40:28:9:19:30 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:20 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:23 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:29 0/0:27:2:2:0:39:5.13%:50:2.4667E-1:40:36:23:13:40 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:49:2:1:1:27:7.41%:34:2.4528E-1:43:25:11:14:27 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:20 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:40 0/0:0:0:0:0:49:0%:93:1E0:42:49:30:19:50 0/0:38:1:1:0:35:2.86%:55:5E-1:43:34:15:19:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:30 0/0:0:0:0:0:21:0%:40:1E0:40:21:15:6:22 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:40 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:16 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:24 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:43 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:42 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:37 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:18 0/0:38:1:1:0:32:3.12%:48:5E-1:40:31:20:11:33 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:16 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:22 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:24 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:25 0/0:33:1:1:0:37:2.7%:59:5E-1:40:36:16:20:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:33 0/0:0:0:0:0:43:0%:82:1E0:38:43:25:18:46 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:12:0%:21:1E0:52:12:6:6:12 0/0:0:0:0:0:13:0%:25:1E0:47:13:5:8:13 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:19:0%:37:1E0:42:19:13:6:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:30 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:18:8:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:35 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:22 0/0:36:1:0:1:22:4.55%:31:5E-1:40:21:11:10:23 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:34:1:1:0:15:6.67%:21:5E-1:46:14:6:8:15 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:34 0/0:38:1:0:1:27:3.7%:41:5E-1:47:26:14:12:27 0/0:0:0:0:0:22:0%:40:1E0:48:22:7:15:23 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:26 0/0:0:0:0:0:39:0%:74:1E0:37:39:21:18:45 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:15:0%:29:1E0:40:15:3:12:17 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:32 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:33 0/0:34:1:1:0:29:3.45%:45:5E-1:37:28:11:17:30 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:20 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:27 0/0:0:0:0:0:20:0%:36:1E0:37:20:14:6:23 0/0:0:0:0:0:11:0%:22:1E0:39:11:7:4:12 0/0:60:1:1:0:25:4%:38:5E-1:38:24:12:12:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:26 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:25 0/0:38:2:2:0:26:7.69%:30:2.451E-1:40:24:13:11:28 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:22 0/0:38:1:1:0:37:2.7%:59:5E-1:41:36:16:20:38 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:22 0/0:37:1:1:0:33:3.03%:52:5E-1:36:32:13:19:36 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:25 0/1:41:9:6:3:16:60%:34:3.4983E-4:37:6:4:2:16 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:38:2:2:0:42:4.76%:57:2.4699E-1:36:40:20:20:49 0/1:37:16:9:7:28:57.14%:61:7.3043E-7:38:12:8:4:28 0/0:38:1:1:0:26:3.85%:38:5E-1:39:25:11:14:26 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:16 0/0:0:0:0:0:36:0%:66:1E0:36:36:11:25:43 0/0:0:0:0:0:23:0%:44:1E0:35:23:11:12:28 0/0:36:1:1:0:37:2.7%:59:5E-1:37:36:18:18:39 0/0:0:0:0:0:27:0%:52:1E0:37:27:14:13:33 0/0:0:0:0:0:32:0%:59:1E0:37:32:15:17:33 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:32 0/0:0:0:0:0:29:0%:55:1E0:37:29:10:19:31 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:25 0/0:34:1:1:0:34:2.94%:51:5E-1:35:33:14:19:36 0/0:0:0:0:0:18:0%:32:1E0:35:18:9:9:22 0/0:0:0:0:0:28:0%:51:1E0:36:28:11:17:31 0/0:38:1:1:0:26:3.85%:38:5E-1:37:25:13:12:26 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:18 0/0:0:0:0:0:40:0%:74:1E0:38:40:22:18:46 0/0:36:1:1:0:31:3.23%:48:5E-1:40:30:13:17:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:40 0/0:38:1:1:0:46:2.17%:73:5E-1:40:45:16:29:48 0/0:38:1:1:0:26:3.85%:38:5E-1:40:25:13:12:28 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:24 0/0:38:1:1:0:23:4.35%:34:5E-1:38:22:12:10:23 0/0:0:0:0:0:44:0%:81:1E0:38:44:22:22:46 0/0:0:0:0:0:34:0%:62:1E0:36:34:20:14:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:26 0/0:34:1:1:0:39:2.56%:62:5E-1:39:38:16:22:42 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:29 0/0:0:0:0:0:39:0%:74:1E0:37:39:13:26:45 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 MTB_anc 1441552 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv1288_Rv1288|gene1313|transcript|Transcript_gene1313|Coding|1/1|c.205T>G|p.Leu69Val|205/1371|205/1371|69/456||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1441552T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1441552T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:1:1:0:39:2.56%:62:5E-1:38:38:16:22:43 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:20 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:39 0/0:38:1:1:0:22:4.55%:31:5E-1:44:21:15:6:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:22 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:34 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:31 0/0:0:0:0:0:14:0%:25:1E0:48:14:5:9:14 0/0:0:0:0:0:27:0%:52:1E0:47:27:7:20:28 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:38:1:1:0:28:3.57%:41:5E-1:45:27:16:11:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:44 0/0:0:0:0:0:15:0%:29:1E0:44:15:6:9:15 0/0:0:0:0:0:48:0%:89:1E0:41:48:18:30:53 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:25 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:21 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:20 0/0:0:0:0:0:41:0%:78:1E0:39:41:16:25:44 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:29:0%:55:1E0:37:29:21:8:33 0/0:38:1:1:0:31:3.23%:48:5E-1:40:30:10:20:31 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:18 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:28 0/0:38:1:1:0:36:2.78%:55:5E-1:42:35:21:14:40 0/0:0:0:0:0:25:0%:48:1E0:36:25:12:13:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:49:2:1:1:26:7.69%:30:2.451E-1:43:24:10:14:27 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:20 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:32 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:40 0/0:0:0:0:0:47:0%:89:1E0:42:47:29:18:50 0/0:36:1:1:0:35:2.86%:55:5E-1:42:34:15:19:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:22 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:41 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:15 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:37 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:12:26:43 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:37 0/0:0:0:0:0:17:0%:33:1E0:46:17:6:11:18 0/0:37:1:1:0:30:3.33%:44:5E-1:40:29:18:11:33 0/0:0:0:0:0:13:0%:25:1E0:42:13:5:8:16 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:34 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:33 0/0:0:0:0:0:43:0%:82:1E0:38:43:24:19:47 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:26 0/0:0:0:0:0:12:0%:21:1E0:52:12:6:6:12 0/0:0:0:0:0:13:0%:25:1E0:48:13:5:8:13 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:30 0/0:0:0:0:0:17:0%:33:1E0:43:17:11:6:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:31 0/0:0:0:0:0:25:0%:48:1E0:47:25:17:8:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:23 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:35 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:35 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:22 0/0:34:1:0:1:22:4.55%:31:5E-1:39:21:11:10:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:28 0/0:37:1:1:0:14:7.14%:17:5E-1:47:13:6:7:15 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:38:1:0:1:27:3.7%:41:5E-1:47:26:14:12:27 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:24 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:27 0/0:0:0:0:0:41:0%:78:1E0:37:41:24:17:45 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:31 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:17:0%:33:1E0:39:17:4:13:17 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:32 0/0:0:0:0:0:28:0%:51:1E0:35:28:15:13:33 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:31 0/0:0:0:0:0:14:0%:25:1E0:35:14:5:9:20 0/0:0:0:0:0:29:0%:55:1E0:37:29:17:12:32 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:27 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:23 0/0:0:0:0:0:11:0%:22:1E0:39:11:8:3:12 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:26 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:38:2:2:0:25:8%:31:2.449E-1:42:23:13:10:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:22 0/0:38:1:1:0:35:2.86%:55:5E-1:41:34:15:19:38 0/0:0:0:0:0:21:0%:40:1E0:35:21:9:12:23 0/0:37:1:1:0:33:3.03%:52:5E-1:37:32:13:19:36 0/0:0:0:0:0:23:0%:44:1E0:35:23:13:10:25 0/1:42:8:5:3:15:57.14%:30:9.6618E-4:37:6:4:2:15 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:21 0/0:37:3:3:0:44:6.82%:53:1.2069E-1:35:41:20:21:48 0/1:37:15:8:7:27:55.56%:56:2.0087E-6:39:12:8:4:28 0/0:38:1:1:0:25:4%:38:5E-1:39:24:11:13:25 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:15 0/0:30:1:1:0:35:2.86%:55:5E-1:35:34:10:24:43 0/0:30:1:1:0:25:4%:38:5E-1:34:24:12:12:29 0/0:36:1:1:0:35:2.86%:55:5E-1:37:34:18:16:39 0/0:0:0:0:0:30:0%:55:1E0:36:30:17:13:33 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:33 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:31 0/0:0:0:0:0:23:0%:44:1E0:35:23:12:11:25 0/0:34:1:1:0:29:3.45%:45:5E-1:36:28:10:18:36 0/0:0:0:0:0:20:0%:36:1E0:35:20:11:9:22 0/0:0:0:0:0:28:0%:51:1E0:35:28:11:17:31 0/0:34:1:1:0:25:4%:38:5E-1:36:24:12:12:26 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:18 0/0:0:0:0:0:42:0%:77:1E0:37:42:24:18:46 0/0:34:1:1:0:35:2.86%:55:5E-1:39:34:17:17:35 0/0:0:0:0:0:38:0%:70:1E0:40:38:14:24:40 0/0:38:1:1:0:46:2.17%:73:5E-1:41:45:16:29:48 0/0:38:1:1:0:26:3.85%:38:5E-1:40:25:14:11:29 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:24 0/0:38:1:1:0:21:4.76%:31:5E-1:38:20:10:10:23 0/0:0:0:0:0:43:0%:82:1E0:37:43:21:22:46 0/0:0:0:0:0:32:0%:59:1E0:35:32:18:14:37 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:26 0/0:38:1:1:0:39:2.56%:62:5E-1:39:38:16:22:43 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:29 0/0:0:0:0:0:39:0%:74:1E0:36:39:14:25:45 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 MTB_anc 1441553 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv1288_Rv1288|gene1313|transcript|Transcript_gene1313|Coding|1/1|c.206T>C|p.Leu69Ser|206/1371|206/1371|69/456||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1441553T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1441553T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:30:1:1:0:42:2.38%:66:5E-1:39:41:18:23:44 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:20 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:39 0/0:38:1:1:0:22:4.55%:31:5E-1:43:21:14:7:23 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:22 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:34 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:32 0/0:0:0:0:0:13:0%:25:1E0:49:13:4:9:14 0/0:0:0:0:0:28:0%:51:1E0:47:28:8:20:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:38:1:1:0:29:3.45%:45:5E-1:46:28:16:12:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:44 0/0:0:0:0:0:13:0%:25:1E0:43:13:5:8:15 0/0:0:0:0:0:51:0%:97:1E0:42:51:21:30:53 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:26 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:24 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:21 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:0:0:0:0:44:0%:81:1E0:39:44:19:25:44 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:21:9:33 0/0:38:1:1:0:30:3.33%:44:5E-1:39:29:9:20:31 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:20 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:28 0/0:32:2:2:0:38:5.26%:50:2.4667E-1:41:36:22:14:40 0/0:0:0:0:0:25:0%:48:1E0:36:25:12:13:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:33 0/0:49:2:1:1:26:7.69%:30:2.451E-1:42:24:11:13:27 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:31 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:40 0/0:0:0:0:0:49:0%:93:1E0:41:49:30:19:50 0/0:34:1:1:0:33:3.03%:52:5E-1:41:32:15:17:38 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:30 0/0:0:0:0:0:21:0%:40:1E0:38:21:14:7:22 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:41 0/0:0:0:0:0:12:0%:21:1E0:45:12:4:8:15 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:43 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:37 0/0:0:0:0:0:17:0%:33:1E0:47:17:6:11:18 0/0:34:1:1:0:30:3.33%:44:5E-1:41:29:18:11:33 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:16 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:24 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:23:13:36 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:28 0/0:26:1:0:1:32:3.12%:48:5E-1:42:31:13:18:34 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:26 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:33 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:47 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:12:0%:21:1E0:52:12:6:6:12 0/0:0:0:0:0:14:0%:25:1E0:46:14:6:8:14 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:19 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:31 0/0:0:0:0:0:25:0%:48:1E0:48:25:18:7:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:32 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:34 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:35 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:22 0/0:38:1:0:1:22:4.55%:31:5E-1:40:21:11:10:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:18:9:28 0/0:38:1:1:0:15:6.67%:21:5E-1:45:14:6:8:15 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:34 0/0:38:1:0:1:26:3.85%:38:5E-1:47:25:14:11:27 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:42:0%:77:1E0:36:42:24:18:44 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:31 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:19 0/0:0:0:0:0:16:0%:29:1E0:39:16:3:13:17 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:31 0/0:0:0:0:0:27:0%:52:1E0:36:27:12:15:33 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:32 0/0:0:0:0:0:17:0%:33:1E0:35:17:7:10:21 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:32 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:26 0/0:0:0:0:0:21:0%:40:1E0:36:21:14:7:23 0/0:0:0:0:0:11:0%:22:1E0:40:11:8:3:11 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:23 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:31 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:23 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:24 0/0:38:2:2:0:25:8%:31:2.449E-1:41:23:13:10:28 0/0:0:0:0:0:19:0%:37:1E0:35:19:8:11:22 0/0:38:1:1:0:37:2.7%:59:5E-1:41:36:17:19:39 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:23 0/0:35:1:1:0:36:2.78%:55:5E-1:35:35:16:19:36 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:25 0/1:41:8:5:3:15:53.33%:29:1.0995E-3:36:7:5:2:15 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:21 0/0:36:3:3:0:39:7.69%:47:1.2013E-1:36:36:15:21:48 0/1:36:16:9:7:27:59.26%:62:6.1806E-7:39:11:7:4:28 0/0:38:1:1:0:24:4.17%:34:5E-1:39:23:10:13:25 0/0:0:0:0:0:14:0%:25:1E0:34:14:4:10:15 0/0:31:1:1:0:40:2.5%:62:5E-1:35:39:14:25:43 0/0:36:1:1:0:23:4.35%:34:5E-1:35:22:10:12:29 0/0:0:0:0:0:35:0%:67:1E0:36:35:19:16:39 0/0:0:0:0:0:29:0%:55:1E0:36:29:16:13:34 0/0:0:0:0:0:33:0%:63:1E0:36:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:36:31:20:11:32 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:31 0/0:0:0:0:0:24:0%:44:1E0:34:24:14:10:25 0/0:31:1:1:0:32:3.12%:48:5E-1:35:31:13:18:35 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:22 0/0:0:0:0:0:29:0%:55:1E0:35:29:12:17:30 0/0:38:1:1:0:23:4.35%:34:5E-1:37:22:12:10:26 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:18 0/0:0:0:0:0:44:0%:81:1E0:37:44:26:18:46 0/0:38:1:1:0:33:3.03%:52:5E-1:39:32:15:17:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:40 0/0:36:1:1:0:48:2.08%:76:5E-1:40:47:17:30:49 0/0:38:1:1:0:28:3.57%:41:5E-1:38:27:16:11:28 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:24 0/0:38:1:1:0:21:4.76%:31:5E-1:38:20:10:10:23 0/0:0:0:0:0:38:0%:70:1E0:38:38:17:21:46 0/0:35:1:1:0:32:3.12%:48:5E-1:37:31:18:13:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:26 0/0:38:1:1:0:38:2.63%:58:5E-1:40:37:15:22:43 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:29 0/0:0:0:0:0:42:0%:77:1E0:37:42:15:27:46 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:33 MTB_anc 1441576 . T C . PASS AC=4;AF=0.013;AN=300;ANN=C|synonymous_variant|LOW|Rv1288_Rv1288|gene1313|transcript|Transcript_gene1313|Coding|1/1|c.229T>C|p.Leu77Leu|229/1371|229/1371|77/456||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1441576T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1441576T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:39:37:14:23:39 0/0:0:0:0:0:16:0%:29:1E0:45:16:6:10:17 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:35 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:22 0/0:36:1:0:1:26:3.85%:38:5E-1:40:25:16:9:28 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:34 0/0:0:0:0:0:13:0%:25:1E0:45:13:5:8:14 0/0:0:0:0:0:30:0%:55:1E0:45:30:9:21:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:28 0/0:34:1:0:1:39:2.56%:62:5E-1:41:38:18:20:39 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:17 0/0:0:0:0:0:50:0%:92:1E0:40:50:21:29:52 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:26 0/0:60:1:0:1:33:3.03%:52:5E-1:42:32:12:20:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:39:1:0:1:20:5%:27:5E-1:42:19:10:9:25 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:20 0/0:36:1:0:1:23:4.35%:34:5E-1:40:22:14:8:26 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:19 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:45 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:31 0/0:28:1:0:1:34:2.94%:51:5E-1:39:33:13:20:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:20 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:26 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:19 0/0:36:2:0:2:31:6.45%:40:2.459E-1:39:29:15:14:34 0/0:37:1:1:0:34:2.94%:51:5E-1:41:33:19:14:36 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:17 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:30 0/0:38:1:0:1:22:4.55%:31:5E-1:39:21:8:13:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:35 0/0:35:1:1:0:45:2.22%:73:5E-1:41:44:27:17:47 0/0:34:1:0:1:34:2.94%:51:5E-1:39:33:18:15:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:26 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:18 0/0:36:1:0:1:37:2.7%:59:5E-1:39:36:19:17:39 0/0:0:0:0:0:14:0%:25:1E0:41:14:6:8:16 0/0:35:2:1:1:27:7.41%:34:2.4528E-1:42:25:15:10:29 0/0:35:1:1:0:20:5%:27:5E-1:42:19:9:10:21 0/0:35:1:0:1:36:2.78%:55:5E-1:42:35:10:25:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:40 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:36 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:38:1:1:0:32:3.12%:48:5E-1:40:31:15:16:35 0/0:34:1:1:0:14:7.14%:17:5E-1:40:13:4:9:14 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:22 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:27 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:31 0/0:29:1:0:1:25:4%:38:5E-1:42:24:12:12:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:30 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:32 0/0:37:2:2:0:22:9.09%:24:2.4419E-1:39:20:14:6:23 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:32 0/0:38:1:0:1:41:2.44%:66:5E-1:40:40:24:16:46 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:28 0/0:0:0:0:0:13:0%:25:1E0:50:13:5:8:13 0/0:0:0:0:0:12:0%:21:1E0:44:12:8:4:13 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:17 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:24 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:38:1:0:1:26:3.85%:38:5E-1:40:25:13:12:28 0/0:0:0:0:0:29:0%:55:1E0:50:29:21:8:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:30 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:60:1:0:1:29:3.45%:45:5E-1:40:28:10:18:32 0/0:38:1:0:1:30:3.33%:44:5E-1:42:29:10:19:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:24 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:21 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:20 0/0:37:1:1:0:25:4%:38:5E-1:40:24:15:9:26 0/0:0:0:0:0:14:0%:25:1E0:45:14:8:6:14 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:27 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:26 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:31 0/0:37:1:0:1:19:5.26%:28:5E-1:40:18:8:10:21 0/0:0:0:0:0:19:0%:37:1E0:37:19:4:15:19 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:26 0/0:36:1:0:1:33:3.03%:52:5E-1:37:32:13:19:33 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:20 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:29 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:28 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:24 0/0:0:0:0:0:11:0%:22:1E0:39:11:8:3:11 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:22 0/0:33:1:1:0:24:4.17%:34:5E-1:39:23:13:10:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:20 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:25 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:21 0/0:0:0:0:0:14:0%:25:1E0:39:14:8:6:16 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:27:1:0:1:20:5%:27:5E-1:37:19:12:7:24 0/0:36:1:0:1:31:3.23%:48:5E-1:37:30:15:15:33 0/0:38:1:1:0:19:5.26%:28:5E-1:36:18:9:9:21 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:20 0/0:33:1:0:1:35:2.86%:55:5E-1:36:34:13:21:40 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:28 0/0:0:0:0:0:14:0%:25:1E0:35:14:4:10:15 0/0:32:1:0:1:30:3.33%:44:5E-1:36:29:12:17:36 0/0:0:0:0:0:24:0%:44:1E0:34:24:15:9:26 0/0:34:1:1:0:35:2.86%:55:5E-1:37:34:19:15:37 0/0:0:0:0:0:29:0%:55:1E0:36:29:14:15:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:29 0/0:0:0:0:0:26:0%:47:1E0:36:26:17:9:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:8:17:29 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:23 0/0:33:1:0:1:27:3.7%:41:5E-1:35:26:12:14:34 0/0:38:1:0:1:19:5.26%:28:5E-1:36:18:10:8:23 0/0:0:0:0:0:24:0%:44:1E0:36:24:9:15:25 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:20 0/0:0:0:0:0:15:0%:29:1E0:37:15:9:6:15 0/0:37:1:1:0:41:2.44%:66:5E-1:36:40:22:18:46 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:38 0/0:0:0:0:0:38:0%:70:1E0:38:38:13:25:42 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:28 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:20 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:19 0/0:38:1:0:1:35:2.86%:55:5E-1:38:34:18:16:38 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:34 0/0:38:1:0:1:22:4.55%:31:5E-1:39:21:8:13:23 0/0:32:2:0:2:37:5.41%:50:2.4658E-1:40:35:16:19:43 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:26 0/0:32:1:0:1:37:2.7%:59:5E-1:38:36:16:20:40 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:29 MTB_anc 1441579 . A T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|Rv1288_Rv1288|gene1313|transcript|Transcript_gene1313|Coding|1/1|c.232A>T|p.Asn78Tyr|232/1371|232/1371|78/456||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1441579A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1441579A>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:40:34:10:24:38 0/0:0:0:0:0:16:0%:29:1E0:46:16:5:11:16 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:34 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:22 0/0:39:1:0:1:21:4.76%:31:5E-1:43:20:12:8:27 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:35 0/0:0:0:0:0:14:0%:25:1E0:47:14:4:10:15 0/0:0:0:0:0:27:0%:52:1E0:45:27:7:20:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:31 0/0:34:1:0:1:36:2.78%:55:5E-1:41:35:16:19:38 0/0:0:0:0:0:17:0%:33:1E0:48:17:10:7:17 0/0:0:0:0:0:48:0%:89:1E0:42:48:19:29:52 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:25 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:18 0/0:33:1:0:1:25:4%:38:5E-1:42:24:15:9:27 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:20 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:31 0/0:37:1:0:1:30:3.33%:44:5E-1:40:29:9:20:33 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:20 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:21 0/0:39:2:0:2:29:6.9%:37:2.4561E-1:40:27:14:13:33 0/0:38:1:1:0:30:3.33%:44:5E-1:42:29:16:13:35 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:17 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:38:1:0:1:20:5%:27:5E-1:40:19:6:13:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:35 0/0:39:1:1:0:43:2.33%:70:5E-1:42:42:27:15:47 0/0:38:1:0:1:31:3.23%:48:5E-1:41:30:13:17:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:26 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:38:1:0:1:36:2.78%:55:5E-1:41:35:18:17:38 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:15 0/0:39:2:1:1:27:7.41%:34:2.4528E-1:42:25:13:12:29 0/0:35:1:1:0:19:5.26%:28:5E-1:43:18:8:10:21 0/0:35:1:0:1:37:2.7%:59:5E-1:42:36:11:25:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:38 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:35 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:39:1:1:0:32:3.12%:48:5E-1:42:31:14:17:35 0/0:38:1:1:0:13:7.69%:18:5E-1:41:12:3:9:16 0/0:0:0:0:0:19:0%:37:1E0:43:19:14:5:22 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:31 0/0:37:1:0:1:23:4.35%:34:5E-1:44:22:11:11:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:32 0/0:39:2:2:0:21:9.52%:25:2.439E-1:40:19:12:7:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:6:24:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:31 0/0:37:1:0:1:40:2.5%:62:5E-1:41:39:21:18:45 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:21 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:13:0%:25:1E0:50:13:5:8:13 0/0:0:0:0:0:14:0%:25:1E0:43:14:9:5:14 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:23 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:10:13:23 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:20 0/0:39:1:0:1:26:3.85%:38:5E-1:40:25:12:13:27 0/0:0:0:0:0:29:0%:55:1E0:50:29:21:8:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:60:1:0:1:32:3.12%:48:5E-1:39:31:10:21:33 0/0:39:1:0:1:29:3.45%:45:5E-1:41:28:9:19:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:37 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:21 0/0:37:1:1:0:23:4.35%:34:5E-1:43:22:13:9:26 0/0:0:0:0:0:13:0%:25:1E0:45:13:7:6:14 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:37 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:29 0/0:39:1:0:1:17:5.88%:24:5E-1:41:16:6:10:20 0/0:0:0:0:0:16:0%:29:1E0:39:16:3:13:18 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:23 0/0:0:0:0:0:29:0%:55:1E0:37:29:12:17:31 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:8:16:26 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:24 0/0:0:0:0:0:8:0%:14:1E0:43:8:6:2:11 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:21 0/0:37:1:1:0:23:4.35%:34:5E-1:38:22:11:11:25 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:30 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:23 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:17 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:33 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:24 0/0:39:1:0:1:30:3.33%:44:5E-1:37:29:13:16:33 0/0:39:1:1:0:22:4.55%:31:5E-1:36:21:11:10:24 1/1:40:9:5:4:10:90%:42:5.9538E-5:33:1:0:1:10 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:17 0/0:38:1:0:1:34:2.94%:51:5E-1:37:33:14:19:40 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:25 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:15 0/0:37:1:0:1:34:2.94%:51:5E-1:37:33:10:23:36 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:24 0/0:39:1:1:0:35:2.86%:55:5E-1:37:34:19:15:39 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:28 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:22 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:32 0/0:33:1:0:1:21:4.76%:31:5E-1:36:20:10:10:22 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:25 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:20 0/0:0:0:0:0:12:0%:21:1E0:39:12:6:6:15 0/0:37:1:1:0:40:2.5%:62:5E-1:37:39:18:21:46 0/0:0:0:0:0:24:0%:44:1E0:39:24:9:15:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:38 0/0:0:0:0:0:38:0%:70:1E0:39:38:12:26:41 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:27 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:19 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:19 0/0:38:1:0:1:29:3.45%:45:5E-1:39:28:13:15:36 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:34 0/0:39:1:0:1:21:4.76%:31:5E-1:40:20:8:12:21 0/0:37:2:0:2:39:5.13%:54:2.4675E-1:39:37:14:23:42 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:28 0/0:39:1:0:1:35:2.86%:55:5E-1:38:34:15:19:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:29 MTB_anc 1441582 . T C . PASS AC=4;AF=0.013;AN=300;ANN=C|missense_variant|MODERATE|Rv1288_Rv1288|gene1313|transcript|Transcript_gene1313|Coding|1/1|c.235T>C|p.Trp79Arg|235/1371|235/1371|79/456||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1441582T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1441582T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:39:37:14:23:39 0/0:0:0:0:0:14:0%:25:1E0:49:14:4:10:16 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:16:8:26 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:22 0/0:39:1:0:1:26:3.85%:38:5E-1:40:25:16:9:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:35 0/0:0:0:0:0:15:0%:29:1E0:46:15:4:11:16 0/0:0:0:0:0:28:0%:51:1E0:44:28:8:20:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:27:1:0:1:35:2.86%:55:5E-1:41:34:15:19:37 0/0:0:0:0:0:17:0%:33:1E0:49:17:10:7:17 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:51 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:24 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:18 0/0:33:1:0:1:28:3.57%:41:5E-1:41:27:17:10:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:20 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:44 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:33 0/0:37:1:0:1:28:3.57%:41:5E-1:41:27:11:16:32 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:20 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:27 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:21 0/0:39:2:0:2:32:6.25%:40:2.4603E-1:40:30:17:13:33 0/0:38:1:1:0:32:3.12%:48:5E-1:40:31:19:12:34 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:19 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:38:1:0:1:22:4.55%:31:5E-1:40:21:7:14:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:34 0/0:39:1:1:0:46:2.17%:73:5E-1:42:45:28:17:48 0/0:39:1:0:1:31:3.23%:48:5E-1:41:30:14:16:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:26 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:39:1:0:1:38:2.63%:58:5E-1:40:37:20:17:38 0/0:0:0:0:0:14:0%:25:1E0:45:14:7:7:14 0/0:39:2:1:1:27:7.41%:34:2.4528E-1:42:25:15:10:29 0/0:38:1:1:0:17:5.88%:24:5E-1:45:16:7:9:20 0/0:37:1:0:1:38:2.63%:58:5E-1:42:37:11:26:40 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:36 0/0:0:0:0:0:20:0%:36:1E0:48:20:7:13:20 0/0:39:1:1:0:35:2.86%:55:5E-1:42:34:16:18:36 0/0:38:1:1:0:16:6.25%:21:5E-1:38:15:5:10:16 0/0:0:0:0:0:18:0%:32:1E0:43:18:12:6:22 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:31 0/0:37:1:0:1:24:4.17%:34:5E-1:44:23:12:11:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:39:2:2:0:21:9.52%:25:2.439E-1:40:19:12:7:23 0/0:0:0:0:0:32:0%:59:1E0:39:32:10:22:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:30 0/0:39:1:0:1:46:2.17%:73:5E-1:40:45:26:19:48 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:12:0%:21:1E0:52:12:5:7:12 0/0:0:0:0:0:15:0%:29:1E0:44:15:10:5:15 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:23 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:20 0/0:37:1:0:1:26:3.85%:38:5E-1:40:25:11:14:26 0/0:0:0:0:0:28:0%:51:1E0:49:28:20:8:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:30 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:60:1:0:1:32:3.12%:48:5E-1:39:31:10:21:33 0/0:39:1:0:1:29:3.45%:45:5E-1:42:28:9:19:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:24 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:21 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:20 0/0:37:1:1:0:24:4.17%:34:5E-1:43:23:15:8:25 0/0:0:0:0:0:12:0%:21:1E0:45:12:7:5:13 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:29 0/0:39:1:0:1:18:5.56%:24:5E-1:40:17:7:10:20 0/0:0:0:0:0:19:0%:37:1E0:39:19:5:14:19 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:22 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:31 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:26 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:24 0/0:0:0:0:0:9:0%:18:1E0:41:9:6:3:11 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:38:1:1:0:25:4%:38:5E-1:38:24:13:11:25 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:29 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:23 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:16 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:32 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:23 0/0:31:1:0:1:33:3.03%:52:5E-1:38:32:15:17:34 0/0:39:1:1:0:21:4.76%:31:5E-1:36:20:10:10:25 1/1:40:9:5:4:10:90%:42:5.9538E-5:30:1:0:1:10 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:17 0/0:38:1:0:1:36:2.78%:55:5E-1:39:35:17:18:41 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:26 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:16 0/0:37:1:0:1:33:3.03%:52:5E-1:37:32:11:21:36 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:24 0/0:39:1:1:0:37:2.7%:59:5E-1:38:36:20:16:40 0/0:0:0:0:0:27:0%:52:1E0:36:27:13:14:31 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:29 0/0:0:0:0:0:27:0%:52:1E0:37:27:16:11:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:28 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:22 0/0:0:0:0:0:27:0%:52:1E0:37:27:14:13:33 0/0:20:1:0:1:20:5%:27:5E-1:36:19:10:9:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:21 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:15 0/0:37:1:1:0:45:2.22%:73:5E-1:38:44:24:20:46 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:38:0%:70:1E0:39:38:13:25:41 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:27 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 0/0:38:1:0:1:35:2.86%:55:5E-1:39:34:18:16:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:35 0/0:39:1:0:1:22:4.55%:31:5E-1:39:21:8:13:22 0/0:38:2:0:2:40:5%:53:2.4684E-1:40:38:16:22:41 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:28 0/0:38:1:0:1:32:3.12%:48:5E-1:39:31:13:18:38 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:27 MTB_anc 1443428 . G A . PASS AC=13;AF=0.049;AN=268;ANN=A|intergenic_region|MODIFIER|Rv1289_Rv1289-Rv1290c_Rv1290c|gene1314-gene1315|intergenic_region|gene1314-gene1315|||n.1443428G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:5:5:0:23:21.74%:12:2.4248E-2:36:17:12:5:23 0/0:38:1:0:1:10:10%:11:5E-1:37:9:8:1:10 0/0:36:4:1:3:18:22.22%:10:5.1948E-2:38:14:7:7:19 0/0:38:1:0:1:8:12.5%:8:5E-1:39:7:5:2:8 0/0:37:3:2:1:15:20%:11:1.1207E-1:37:12:8:4:15 0/1:36:6:4:2:13:46.15%:21:6.865E-3:36:6:6:0:13 ./. 0/0:37:3:2:1:19:15.79%:17:1.1486E-1:40:16:11:5:20 0/0:36:2:1:1:12:16.67%:10:2.3913E-1:42:10:6:4:13 0/0:38:3:3:0:20:15%:16:1.1538E-1:38:17:12:5:20 ./. ./. ./. ./. ./. 0/0:37:4:1:3:12:33.33%:4:4.6584E-2:35:8:5:3:12 0/0:38:3:1:2:15:20%:11:1.1207E-1:42:12:9:3:15 0/0:37:1:1:0:13:7.69%:14:5E-1:43:10:8:2:13 0/0:38:1:1:0:13:7.69%:18:5E-1:36:12:5:7:13 0/0:38:2:0:2:16:12.5%:16:2.4138E-1:37:13:10:3:16 0/0:37:5:3:2:15:33.33%:6:2.1073E-2:36:10:10:0:15 ./. 0/0:38:1:0:1:11:9.09%:11:5E-1:39:9:7:2:11 ./. 0/0:38:1:0:1:21:4.76%:31:5E-1:37:20:18:2:21 0/0:38:1:1:0:9:11.11%:11:5E-1:43:8:5:3:10 0/0:37:4:2:2:13:30.77%:4:4.5113E-2:35:7:6:1:13 0/1:38:9:5:4:16:56.25%:33:4.0786E-4:40:7:6:1:18 0/1:38:9:4:5:21:42.86%:32:6.1425E-4:36:11:8:3:21 0/0:37:3:3:0:13:23.08%:9:1.1E-1:36:10:8:2:13 ./. 0/0:38:3:2:1:17:17.65%:14:1.1364E-1:36:14:7:7:18 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:41:15:8:7:17 0/0:37:2:2:0:14:14.29%:12:2.4074E-1:39:12:11:1:14 0/0:37:3:3:0:14:21.43%:9:1.1E-1:40:10:6:4:14 0/0:37:4:2:2:16:25%:8:4.9808E-2:41:11:9:2:16 0/0:37:3:1:2:18:16.67%:14:1.1364E-1:39:14:9:5:18 0/0:37:2:2:0:20:10%:21:2.4359E-1:40:18:13:5:20 0/0:38:1:1:0:19:5.26%:28:5E-1:35:18:11:7:19 0/0:37:5:1:4:26:19.23%:17:2.531E-2:39:21:13:8:27 0/0:37:4:1:3:22:18.18%:15:5.3885E-2:37:18:13:5:22 0/0:38:3:0:3:19:15.79%:17:1.1486E-1:37:16:14:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:38:3:2:1:15:20%:11:1.1207E-1:38:12:10:2:15 0/0:38:2:2:0:20:10%:21:2.4359E-1:36:18:14:4:20 0/0:37:4:4:0:19:21.05%:13:5.251E-2:36:15:12:3:19 0/0:37:2:2:0:11:18.18%:10:2.381E-1:36:9:8:1:11 ./. 0/0:37:4:4:0:22:18.18%:15:5.3885E-2:36:18:12:6:22 0/0:37:2:0:2:14:14.29%:12:2.4074E-1:40:12:6:6:14 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:8 0/0:38:1:1:0:21:4.76%:31:5E-1:37:20:13:7:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:4:1:3:17:23.53%:11:5.132E-2:38:13:9:4:17 0/0:38:2:1:1:14:14.29%:13:2.4E-1:36:11:11:0:14 0/0:37:4:2:2:28:14.29%:23:5.5746E-2:36:24:20:4:30 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:10 0/0:38:2:0:2:11:18.18%:7:2.3684E-1:36:8:6:2:12 0/0:37:4:3:1:30:13.33%:23:5.5746E-2:37:24:17:7:30 0/0:36:2:1:1:16:12.5%:16:2.4138E-1:38:13:10:3:17 0/0:38:2:0:2:10:20%:7:2.3684E-1:40:8:6:2:10 0/0:37:3:2:1:16:18.75%:11:1.1207E-1:38:12:9:3:18 0/0:37:2:1:1:23:8.7%:24:2.4419E-1:37:20:13:7:24 0/0:37:2:1:1:12:16.67%:10:2.3913E-1:36:10:10:0:13 0/0:38:5:4:1:26:19.23%:14:2.4823E-2:38:19:14:5:27 0/0:37:4:3:1:25:16%:21:5.4928E-2:39:21:17:4:25 0/0:24:1:0:1:13:7.69%:18:5E-1:46:12:10:2:13 0/1:37:15:8:7:34:44.12%:57:1.7241E-6:35:11:10:1:35 0/0:38:3:1:2:11:27.27%:7:1.0714E-1:39:8:6:2:11 0/1:37:6:5:1:16:37.5%:20:8.837E-3:38:10:9:1:16 0/0:36:1:1:0:18:5.56%:24:5E-1:39:17:14:3:20 0/0:32:1:1:0:17:5.88%:24:5E-1:40:16:11:5:17 0/1:38:7:3:4:21:33.33%:23:4.3101E-3:40:14:10:4:21 0/0:38:3:2:1:21:14.29%:19:1.1585E-1:40:18:13:5:21 0/0:37:3:3:0:19:15.79%:17:1.1486E-1:37:16:11:5:20 0/0:38:1:0:1:14:7.14%:18:5E-1:36:12:10:2:14 0/0:38:2:0:2:21:9.52%:25:2.439E-1:37:19:14:5:21 0/0:37:2:0:2:15:13.33%:16:2.4138E-1:36:13:8:5:15 0/1:39:14:11:3:31:45.16%:52:5.4595E-6:36:12:10:2:31 0/0:36:3:1:2:16:18.75%:11:1.129E-1:35:13:10:3:16 0/0:38:1:1:0:20:5%:27:5E-1:38:19:15:4:21 0/0:37:4:3:1:29:13.79%:26:5.5981E-2:37:25:20:5:29 0/0:37:3:1:2:15:20%:11:1.1207E-1:36:12:9:3:15 0/0:37:2:2:0:10:20%:7:2.3529E-1:37:7:5:2:10 0/0:38:3:0:3:14:21.43%:9:1.1E-1:36:10:9:1:16 ./. 0/0:37:4:2:2:12:33.33%:4:4.6584E-2:36:8:7:1:12 0/0:0:0:0:0:7:0%:14:1E0:39:7:7:0:7 0/0:38:2:2:0:10:20%:7:2.3684E-1:40:8:5:3:10 0/0:38:1:1:0:11:9.09%:11:5E-1:45:9:6:3:11 0/1:37:11:7:4:31:35.48%:38:1.362E-4:36:16:10:6:33 0/0:37:3:3:0:14:21.43%:9:1.1111E-1:43:11:8:3:15 0/0:37:3:2:1:23:13.04%:22:1.1667E-1:38:20:16:4:24 0/0:37:4:1:3:21:19.05%:15:5.3471E-2:38:17:14:3:21 0/0:37:5:4:1:20:25%:10:2.3562E-2:37:15:12:3:21 0/0:37:2:1:1:14:14.29%:12:2.4074E-1:38:12:8:4:14 0/0:39:1:1:0:12:8.33%:14:5E-1:37:11:9:2:13 ./. 0/0:38:2:1:1:20:10%:21:2.4359E-1:37:18:17:1:20 0/0:38:2:1:1:18:11.11%:18:2.4286E-1:39:16:6:10:19 0/0:0:0:0:0:13:0%:25:1E0:37:13:10:3:13 0/0:37:2:1:1:16:12.5%:15:2.4194E-1:36:14:11:3:16 0/0:37:3:3:0:31:9.68%:34:1.1885E-1:37:28:22:6:32 0/1:37:8:4:4:19:42.11%:28:1.5455E-3:36:11:9:2:20 0/0:38:3:2:1:16:18.75%:11:1.129E-1:33:13:9:4:17 0/0:38:5:1:4:16:31.25%:6:2.1691E-2:37:11:7:4:16 0/0:38:2:2:0:16:12.5%:15:2.4194E-1:38:14:9:5:16 0/0:36:3:0:3:19:15.79%:14:1.1429E-1:38:15:11:4:19 0/0:38:2:1:1:20:10%:21:2.4324E-1:39:17:9:8:20 0/0:37:1:0:1:16:6.25%:21:5E-1:39:15:10:5:16 0/0:38:1:1:0:13:7.69%:18:5E-1:38:12:9:3:13 0/0:36:2:0:2:10:20%:7:2.3684E-1:36:8:6:2:10 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:34:10:9:1:12 0/0:38:1:1:0:12:8.33%:14:5E-1:37:11:8:3:12 0/0:37:4:3:1:16:25%:8:5.0612E-2:36:12:7:5:17 0/0:36:3:2:1:21:14.29%:19:1.1585E-1:38:18:14:4:22 0/0:37:3:1:2:16:18.75%:11:1.129E-1:36:13:10:3:16 0/0:38:4:2:2:14:28.57%:6:4.8889E-2:38:10:6:4:14 0/0:37:1:0:1:9:11.11%:11:5E-1:37:8:8:0:9 ./. ./. 0/0:38:1:1:0:7:14.29%:8:5E-1:37:6:4:2:7 0/0:38:1:0:1:10:10%:11:5E-1:34:9:7:2:10 0/0:37:1:1:0:27:3.7%:41:5E-1:35:26:20:6:27 0/0:37:1:1:0:13:7.69%:18:5E-1:36:12:9:3:13 0/0:35:3:2:1:22:13.64%:19:1.1628E-1:35:19:15:4:22 0/0:37:2:0:2:15:13.33%:16:2.4138E-1:36:13:11:2:15 0/0:37:4:2:2:19:21.05%:13:5.251E-2:35:15:14:1:19 0/0:38:2:2:0:24:8.33%:27:2.4468E-1:36:22:17:5:24 0/0:37:5:5:0:23:21.74%:12:2.4248E-2:37:17:12:5:24 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:37:20:14:6:22 0/0:37:2:1:1:18:11.11%:18:2.4242E-1:36:15:11:4:18 0/1:36:10:7:3:23:43.48%:35:2.6061E-4:36:12:11:1:23 0/0:37:5:4:1:22:22.73%:12:2.4248E-2:35:17:11:6:22 0/0:38:5:3:2:22:22.73%:12:2.4248E-2:35:17:14:3:23 0/0:37:5:4:1:20:25%:10:2.3562E-2:37:15:11:4:20 0/0:37:2:2:0:26:7.69%:30:2.451E-1:36:24:16:8:26 0/1:37:8:7:1:24:33.33%:27:1.949E-3:37:16:13:3:24 0/0:38:2:0:2:20:10%:21:2.4359E-1:37:18:14:4:20 0/0:37:3:0:3:13:23.08%:9:1.1E-1:36:10:7:3:13 0/0:37:4:2:2:17:23.53%:11:5.132E-2:37:13:10:3:17 0/0:39:1:1:0:15:6.67%:17:5E-1:36:13:10:3:15 0/0:38:5:3:2:16:31.25%:6:2.1691E-2:36:11:10:1:16 0/0:37:4:2:2:16:25%:8:5.0612E-2:38:12:9:3:16 0/0:38:1:1:0:15:6.67%:21:5E-1:38:14:11:3:16 0/0:39:2:2:0:17:11.76%:16:2.4138E-1:37:13:10:3:17 0/0:38:1:1:0:17:5.88%:21:5E-1:35:15:11:4:17 0/1:37:10:6:4:28:35.71%:34:3.6855E-4:39:18:11:7:30 0/1:37:11:9:2:34:32.35%:37:1.594E-4:37:19:15:4:34 0/0:38:1:1:0:10:10%:11:5E-1:38:9:5:4:11 MTB_anc 1443428 . G GGGTTAGATTGCCCGGCTCCTCAACCCGCCGTTTCGGCGTGCATCGTCGCCGGGCTA . PASS AC=8;AF=0.036;AN=222;ANN=GGGTTAGATTGCCCGGCTCCTCAACCCGCCGTTTCGGCGTGCATCGTCGCCGGGCTA|intergenic_region|MODIFIER|Rv1289_Rv1289-Rv1290c_Rv1290c|gene1314-gene1315|intergenic_region|gene1314-gene1315|||n.1443428_1443429insGGTTAGATTGCCCGGCTCCTCAACCCGCCGTTTCGGCGTGCATCGTCGCCGGGCTA||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. ./. ./. ./. ./. 0/0:37:3:2:1:17:17.65%:14:1.1364E-1:38:14:12:2:17 ./. ./. ./. 0/0:38:1:0:1:17:5.88%:24:5E-1:44:16:13:3:18 0/0:38:4:3:1:19:21.05%:10:5.1948E-2:35:14:13:1:19 0/0:38:3:3:0:12:25%:6:1.087E-1:42:9:4:5:13 0/0:37:6:4:2:24:25%:11:1.0968E-2:36:18:17:1:25 0/0:38:3:1:2:9:33.33%:4:1.0294E-1:36:6:5:1:10 ./. ./. ./. ./. ./. ./. 0/1:37:7:4:3:29:24.14%:22:5.1909E-3:36:22:14:8:29 ./. 0/1:38:6:1:5:17:35.29%:20:9.2021E-3:37:11:7:4:17 ./. ./. ./. ./. ./. ./. 0/1:37:7:4:3:28:25%:22:5.1054E-3:38:21:14:7:28 ./. ./. ./. ./. ./. 0/0:37:3:1:2:18:16.67%:14:1.1364E-1:39:14:9:5:18 0/0:37:2:2:0:20:10%:21:2.4359E-1:40:18:13:5:20 0/0:38:1:1:0:19:5.26%:28:5E-1:35:18:11:7:19 0/0:37:5:1:4:26:19.23%:17:2.531E-2:39:21:13:8:27 0/0:37:4:1:3:22:18.18%:15:5.3885E-2:37:18:13:5:22 0/0:38:3:0:3:19:15.79%:17:1.1486E-1:37:16:14:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:38:3:2:1:15:20%:11:1.1207E-1:38:12:10:2:15 0/0:38:2:2:0:20:10%:21:2.4359E-1:36:18:14:4:20 0/0:37:4:4:0:19:21.05%:13:5.251E-2:36:15:12:3:19 0/0:37:2:2:0:11:18.18%:10:2.381E-1:36:9:8:1:11 0/1:37:6:4:2:16:37.5%:20:8.4291E-3:40:9:6:3:16 0/0:37:4:4:0:22:18.18%:15:5.3885E-2:36:18:12:6:22 0/0:37:2:0:2:14:14.29%:12:2.4074E-1:40:12:6:6:14 0/0:0:0:0:0:8:0%:14:1E0:36:8:6:2:8 0/0:38:1:1:0:21:4.76%:31:5E-1:37:20:13:7:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:4:1:3:17:23.53%:11:5.132E-2:38:13:9:4:17 0/0:38:2:1:1:14:14.29%:13:2.4E-1:36:11:11:0:14 0/0:37:4:2:2:28:14.29%:23:5.5746E-2:36:24:20:4:30 0/0:0:0:0:0:10:0%:17:1E0:37:10:6:4:10 0/0:38:2:0:2:11:18.18%:7:2.3684E-1:36:8:6:2:12 0/0:37:4:3:1:30:13.33%:23:5.5746E-2:37:24:17:7:30 0/0:36:2:1:1:16:12.5%:16:2.4138E-1:38:13:10:3:17 0/0:38:2:0:2:10:20%:7:2.3684E-1:40:8:6:2:10 0/0:37:3:2:1:16:18.75%:11:1.1207E-1:38:12:9:3:18 0/0:37:2:1:1:23:8.7%:24:2.4419E-1:37:20:13:7:24 0/0:37:2:1:1:12:16.67%:10:2.3913E-1:36:10:10:0:13 0/0:38:5:4:1:26:19.23%:14:2.4823E-2:38:19:14:5:27 0/0:37:4:3:1:25:16%:21:5.4928E-2:39:21:17:4:25 0/0:24:1:0:1:13:7.69%:18:5E-1:46:12:10:2:13 ./. 0/0:38:3:1:2:11:27.27%:7:1.0714E-1:39:8:6:2:11 ./. 0/0:36:1:1:0:18:5.56%:24:5E-1:39:17:14:3:20 0/0:32:1:1:0:17:5.88%:24:5E-1:40:16:11:5:17 ./. 0/0:38:3:2:1:21:14.29%:19:1.1585E-1:40:18:13:5:21 0/0:37:3:3:0:19:15.79%:17:1.1486E-1:37:16:11:5:20 0/0:38:1:0:1:14:7.14%:18:5E-1:36:12:10:2:14 0/0:38:2:0:2:21:9.52%:25:2.439E-1:37:19:14:5:21 0/0:37:2:0:2:15:13.33%:16:2.4138E-1:36:13:8:5:15 ./. 0/0:36:3:1:2:16:18.75%:11:1.129E-1:35:13:10:3:16 0/0:38:1:1:0:20:5%:27:5E-1:38:19:15:4:21 0/0:37:4:3:1:29:13.79%:26:5.5981E-2:37:25:20:5:29 0/0:37:3:1:2:15:20%:11:1.1207E-1:36:12:9:3:15 0/0:37:2:2:0:10:20%:7:2.3529E-1:37:7:5:2:10 0/0:38:3:0:3:14:21.43%:9:1.1E-1:36:10:9:1:16 0/1:37:7:5:2:19:36.84%:23:3.9926E-3:36:12:9:3:20 0/0:37:4:2:2:12:33.33%:4:4.6584E-2:36:8:7:1:12 0/0:0:0:0:0:7:0%:14:1E0:39:7:7:0:7 0/0:38:2:2:0:10:20%:7:2.3684E-1:40:8:5:3:10 0/0:38:1:1:0:11:9.09%:11:5E-1:45:9:6:3:11 ./. 0/0:37:3:3:0:14:21.43%:9:1.1111E-1:43:11:8:3:15 0/0:37:3:2:1:23:13.04%:22:1.1667E-1:38:20:16:4:24 0/0:37:4:1:3:21:19.05%:15:5.3471E-2:38:17:14:3:21 0/0:37:5:4:1:20:25%:10:2.3562E-2:37:15:12:3:21 0/0:37:2:1:1:14:14.29%:12:2.4074E-1:38:12:8:4:14 0/0:39:1:1:0:12:8.33%:14:5E-1:37:11:9:2:13 0/1:37:7:3:4:20:35%:23:4.158E-3:42:13:6:7:20 0/0:38:2:1:1:20:10%:21:2.4359E-1:37:18:17:1:20 0/0:38:2:1:1:18:11.11%:18:2.4286E-1:39:16:6:10:19 0/0:0:0:0:0:13:0%:25:1E0:37:13:10:3:13 0/0:37:2:1:1:16:12.5%:15:2.4194E-1:36:14:11:3:16 0/0:37:3:3:0:31:9.68%:34:1.1885E-1:37:28:22:6:32 ./. 0/0:38:3:2:1:16:18.75%:11:1.129E-1:33:13:9:4:17 0/0:38:5:1:4:16:31.25%:6:2.1691E-2:37:11:7:4:16 0/0:38:2:2:0:16:12.5%:15:2.4194E-1:38:14:9:5:16 0/0:36:3:0:3:19:15.79%:14:1.1429E-1:38:15:11:4:19 0/0:38:2:1:1:20:10%:21:2.4324E-1:39:17:9:8:20 0/0:37:1:0:1:16:6.25%:21:5E-1:39:15:10:5:16 0/0:38:1:1:0:13:7.69%:18:5E-1:38:12:9:3:13 0/0:36:2:0:2:10:20%:7:2.3684E-1:36:8:6:2:10 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:34:10:9:1:12 0/0:38:1:1:0:12:8.33%:14:5E-1:37:11:8:3:12 0/0:37:4:3:1:16:25%:8:5.0612E-2:36:12:7:5:17 0/0:36:3:2:1:21:14.29%:19:1.1585E-1:38:18:14:4:22 0/0:37:3:1:2:16:18.75%:11:1.129E-1:36:13:10:3:16 0/0:38:4:2:2:14:28.57%:6:4.8889E-2:38:10:6:4:14 0/0:37:1:0:1:9:11.11%:11:5E-1:37:8:8:0:9 0/1:37:11:6:5:31:35.48%:37:1.6659E-4:38:20:15:5:31 0/1:37:16:8:8:35:45.71%:57:1.637E-6:38:19:12:7:35 0/0:38:1:1:0:7:14.29%:8:5E-1:37:6:4:2:7 0/0:38:1:0:1:10:10%:11:5E-1:34:9:7:2:10 0/0:37:1:1:0:27:3.7%:41:5E-1:35:26:20:6:27 0/0:37:1:1:0:13:7.69%:18:5E-1:36:12:9:3:13 0/0:35:3:2:1:22:13.64%:19:1.1628E-1:35:19:15:4:22 0/0:37:2:0:2:15:13.33%:16:2.4138E-1:36:13:11:2:15 0/0:37:4:2:2:19:21.05%:13:5.251E-2:35:15:14:1:19 0/0:38:2:2:0:24:8.33%:27:2.4468E-1:36:22:17:5:24 0/0:37:5:5:0:23:21.74%:12:2.4248E-2:37:17:12:5:24 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:37:20:14:6:22 0/0:37:2:1:1:18:11.11%:18:2.4242E-1:36:15:11:4:18 ./. 0/0:37:5:4:1:22:22.73%:12:2.4248E-2:35:17:11:6:22 0/0:38:5:3:2:22:22.73%:12:2.4248E-2:35:17:14:3:23 0/0:37:5:4:1:20:25%:10:2.3562E-2:37:15:11:4:20 0/0:37:2:2:0:26:7.69%:30:2.451E-1:36:24:16:8:26 ./. 0/0:38:2:0:2:20:10%:21:2.4359E-1:37:18:14:4:20 0/0:37:3:0:3:13:23.08%:9:1.1E-1:36:10:7:3:13 0/0:37:4:2:2:17:23.53%:11:5.132E-2:37:13:10:3:17 0/0:39:1:1:0:15:6.67%:17:5E-1:36:13:10:3:15 0/0:38:5:3:2:16:31.25%:6:2.1691E-2:36:11:10:1:16 0/0:37:4:2:2:16:25%:8:5.0612E-2:38:12:9:3:16 0/0:38:1:1:0:15:6.67%:21:5E-1:38:14:11:3:16 0/0:39:2:2:0:17:11.76%:16:2.4138E-1:37:13:10:3:17 0/0:38:1:1:0:17:5.88%:21:5E-1:35:15:11:4:17 ./. ./. 0/0:38:1:1:0:10:10%:11:5E-1:38:9:5:4:11 MTB_anc 1444202 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1290c_Rv1290c|gene1315|transcript|Transcript_gene1315|Coding|1/1|c.846G>C|p.Leu282Phe|846/1566|846/1566|282/521||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1444202C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1444202C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:48:17:31:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:22:12:10:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:14:13:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:35:19:16:36:97.22%:99:8.3613E-20:39:1:1:0:37 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:18:12:6:19:94.74%:99:1.1019E-10:0:0:0:0:20 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:52 1/1:36:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 1445069 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv1290A_Rv1290A|gene1316|transcript|Transcript_gene1316|Coding|1/1|c.12G>A|p.Leu4Leu|12/315|12/315|4/104||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1445069G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1445069G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:28:10:18:29:96.55%:99:9.9776E-16:38:1:0:1:30 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:50:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:67:41:26:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:33:16:17:34:97.06%:99:1.2301E-18:34:1:1:0:35 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:22:10:12:23:95.65%:99:2.9149E-12:38:1:1:0:23 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:39:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:57:33:24:58:98.28%:99:9.6072E-33:39:1:0:1:58 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 1458144 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1301_Rv1301|gene1328|transcript|Transcript_gene1328|Coding|1/1|c.587A>C|p.Gln196Pro|587/654|587/654|196/217||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1458144A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1458144A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:50:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:20:10:10:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:43:27:16:44:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:43:17:26:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:53:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:60:41:19:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:34:17:17:35:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:52:32:20:53:98.11%:99:6.3169E-31:0:0:0:0:53 1/1:42:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 1468105 . CCG C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|frameshift_variant|HIGH|Rv1312_Rv1312|gene1339|transcript|Transcript_gene1339|Coding|1/1|c.428_429delGC|p.Arg143fs|428/444|428/444|143/147||INFO_REALIGN_3_PRIME,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1468106_1468107delCG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1468106_1468107delCG||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:45 0/0:0:0:0:0:20:0%:36:1E0:51:20:9:11:20 0/0:0:0:0:0:51:0%:97:1E0:44:51:27:24:51 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:16 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:35 0/0:0:0:0:0:17:0%:33:1E0:48:17:7:10:18 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:25 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:15:0%:29:1E0:47:15:8:7:16 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:5:16:21 0/0:60:1:0:1:47:2.13%:77:5E-1:40:46:16:30:48 0/0:0:0:0:0:20:0%:36:1E0:49:20:8:12:21 0/0:38:1:0:1:29:3.45%:45:5E-1:39:28:16:12:29 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:28 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:42:0%:77:1E0:47:42:29:13:42 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:43 0/0:36:1:1:0:26:3.85%:38:5E-1:40:25:13:12:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:48 0/0:38:1:1:0:27:3.7%:41:5E-1:43:26:16:10:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:42 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:60:1:0:1:34:2.94%:51:5E-1:42:33:19:14:34 0/0:0:0:0:0:14:0%:25:1E0:43:14:5:9:14 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:19 0/0:0:0:0:0:21:0%:40:1E0:36:21:13:8:22 0/0:0:0:0:0:18:0%:32:1E0:47:18:12:6:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:32 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:23 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:36 0/0:0:0:0:0:19:0%:37:1E0:42:19:13:6:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:32 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:22 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:60:1:1:0:55:1.82%:91:5E-1:42:54:25:29:56 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:38:1:1:0:34:2.94%:51:5E-1:46:33:16:17:34 0/0:0:0:0:0:17:0%:33:1E0:44:17:11:6:17 0/0:0:0:0:0:17:0%:33:1E0:44:17:14:3:18 0/0:38:1:1:0:24:4.17%:34:5E-1:41:23:14:9:25 0/0:0:0:0:0:33:0%:63:1E0:48:33:12:21:34 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:22:6:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:49:28:9:19:29 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:19 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:37 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:42 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:60:1:0:1:21:4.76%:31:5E-1:44:20:12:8:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:10:24:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:10:19:29 0/0:0:0:0:0:45:0%:85:1E0:38:45:22:23:46 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:31:1:0:1:38:2.63%:58:5E-1:43:37:19:18:38 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:20 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:33 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:21:5:27 0/0:31:1:1:0:25:4%:38:5E-1:39:24:13:11:25 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:17 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:15 0/0:0:0:0:0:17:0%:33:1E0:41:17:12:5:17 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:21 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:38:1:1:0:19:5.26%:28:5E-1:42:18:11:7:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:27 0/0:0:0:0:0:36:0%:66:1E0:38:36:14:22:38 0/0:0:0:0:0:19:0%:37:1E0:39:19:14:5:19 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:24 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:24 0/0:0:0:0:0:20:0%:36:1E0:37:20:6:14:20 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:38 0/0:0:0:0:0:44:0%:81:1E0:38:44:23:21:45 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:38:1:0:1:35:2.86%:55:5E-1:38:34:21:13:38 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:38:1:0:1:23:4.35%:34:5E-1:39:22:12:10:26 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:31 0/0:38:1:0:1:42:2.38%:66:5E-1:41:41:24:17:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:26 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:17:0%:33:1E0:44:17:5:12:17 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:27 0/0:0:0:0:0:48:0%:89:1E0:37:48:30:18:50 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:39 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:43 0/0:0:0:0:0:39:0%:74:1E0:38:39:16:23:39 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:39 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:21 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:40 0/0:38:1:0:1:47:2.13%:77:5E-1:38:46:27:19:50 0/0:0:0:0:0:37:0%:70:1E0:38:37:15:22:37 MTB_anc 1468208 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1313c_Rv1313c|gene1340|transcript|Transcript_gene1340|Coding|1/1|c.1298T>G|p.Leu433Arg|1298/1335|1298/1335|433/444||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1468208A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1468208A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:52:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:21:7:14:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:52:23:12:11:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:27:9:18:28:96.43%:99:3.7915E-15:34:1:1:0:28 1/1:49:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:39:19:20:40:97.5%:99:3.8137E-22:39:1:0:1:40 1/1:44:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:14:15:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:54:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:53:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:14:5:9:15:93.33%:69:1.0315E-7:33:1:1:0:17 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:12:17:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:37:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:22:10:12:23:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 MTB_anc 1468420 . A G . PASS AC=152;AF=1.00;AN=152;ANN=G|synonymous_variant|LOW|Rv1313c_Rv1313c|gene1340|transcript|Transcript_gene1340|Coding|1/1|c.1086T>C|p.Arg362Arg|1086/1335|1086/1335|362/444||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1468420A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1468420A>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 MTB_anc 1476087 . C T . PASS AC=2;AF=6.757e-03;AN=296;ANN=T|custom|MODIFIER|||CUSTOM&additionnal_annotations|linezolid_capreomycin_clarithromycin|||n.1476087C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|stable_RNAs|||n.1476087C>T||||||,T|non_coding_exon_variant|MODIFIER|rrl_Rvnr02|gene1345|transcript|rna26|Noncoding|1/1|n.2430C>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:45:42:28:14:42 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:45:0%:85:1E0:46:45:27:18:45 0/0:0:0:0:0:20:0%:36:1E0:46:20:7:13:22 0/0:60:1:0:1:17:5.88%:24:5E-1:41:16:9:7:17 0/0:0:0:0:0:14:0%:25:1E0:47:14:11:3:14 0/0:0:0:0:0:42:0%:77:1E0:47:42:26:16:43 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:15 0/0:27:1:0:1:28:3.57%:41:5E-1:49:27:18:9:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:38 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:16 0/0:0:0:0:0:19:0%:37:1E0:40:19:14:5:20 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:19 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:15:0%:29:1E0:43:15:12:3:15 0/0:0:0:0:0:8:0%:14:1E0:48:8:1:7:8 0/0:0:0:0:0:18:0%:32:1E0:47:18:14:4:18 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:17 0/0:0:0:0:0:12:0%:21:1E0:46:12:9:3:12 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:45 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:30 0/0:0:0:0:0:38:0%:70:1E0:48:38:23:15:40 0/0:0:0:0:0:9:0%:18:1E0:43:9:5:4:10 0/0:0:0:0:0:13:0%:25:1E0:48:13:7:6:13 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:14:0%:25:1E0:44:14:11:3:14 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:15 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:45 0/0:0:0:0:0:14:0%:25:1E0:41:14:11:3:15 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:37:1:0:1:27:3.7%:41:5E-1:45:26:15:11:29 0/0:0:0:0:0:25:0%:48:1E0:46:25:18:7:26 0/0:0:0:0:0:63:0%:99:1E0:45:63:39:24:64 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:23 0/0:0:0:0:0:15:0%:29:1E0:43:15:10:5:15 0/0:0:0:0:0:14:0%:25:1E0:43:14:4:10:14 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:16 0/0:39:1:0:1:15:6.67%:21:5E-1:46:14:8:6:15 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:10:0%:17:1E0:44:10:6:4:11 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:17 0/0:0:0:0:0:20:0%:36:1E0:44:20:6:14:20 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:44 0/0:0:0:0:0:12:0%:21:1E0:50:12:10:2:12 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:24 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:18 0/0:0:0:0:0:13:0%:25:1E0:44:13:10:3:14 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:18 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:7:0%:14:1E0:54:7:7:0:7 0/0:0:0:0:0:14:0%:25:1E0:45:14:8:6:15 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:11:0%:22:1E0:51:11:5:6:11 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:43 0/0:0:0:0:0:11:0%:22:1E0:42:11:6:5:11 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:21 0/0:0:0:0:0:9:0%:18:1E0:48:9:7:2:9 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:17:0%:33:1E0:51:17:12:5:17 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:16 0/0:0:0:0:0:10:0%:17:1E0:47:10:3:7:10 0/0:0:0:0:0:16:0%:29:1E0:43:16:11:5:16 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:13:0%:25:1E0:48:13:3:10:13 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:31 0/0:0:0:0:0:13:0%:25:1E0:42:13:7:6:14 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:28:0%:51:1E0:48:28:21:7:28 0/0:0:0:0:0:9:0%:18:1E0:36:9:7:2:10 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:19:0%:37:1E0:44:19:13:6:19 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:51 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:27 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:19 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:19 0/0:0:0:0:0:18:0%:32:1E0:46:18:14:4:18 0/0:60:1:1:0:28:3.57%:41:5E-1:40:27:12:15:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:15 0/0:0:0:0:0:13:0%:25:1E0:44:13:10:3:13 0/0:0:0:0:0:8:0%:14:1E0:46:8:3:5:8 0/0:0:0:0:0:10:0%:17:1E0:46:10:8:2:10 0/0:0:0:0:0:17:0%:33:1E0:47:17:7:10:17 0/0:0:0:0:0:15:0%:29:1E0:40:15:11:4:15 0/0:0:0:0:0:13:0%:25:1E0:45:13:6:7:13 0/0:0:0:0:0:15:0%:29:1E0:46:15:9:6:15 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:10 0/0:0:0:0:0:17:0%:33:1E0:41:17:4:13:17 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:19 0/0:37:1:0:1:34:2.94%:51:5E-1:43:33:20:13:34 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:17 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:18:0%:32:1E0:41:18:13:5:18 0/0:0:0:0:0:59:0%:99:1E0:42:59:31:28:59 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:50 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:14 0/0:0:0:0:0:15:0%:29:1E0:38:15:10:5:16 0/0:0:0:0:0:44:0%:81:1E0:40:44:27:17:46 0/0:0:0:0:0:32:0%:59:1E0:41:32:22:10:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:43 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:40 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:36 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:28 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:44 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:33 0/0:0:0:0:0:48:0%:89:1E0:40:48:30:18:48 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:19:7:26 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:38 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:43 0/0:0:0:0:0:22:0%:40:1E0:45:22:16:6:23 0/0:37:1:0:1:43:2.33%:70:5E-1:42:42:23:19:43 0/0:0:0:0:0:53:0%:99:1E0:45:53:32:21:55 0/0:0:0:0:0:50:0%:92:1E0:42:50:33:17:50 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:30 MTB_anc 1479085 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|alkA_Rv1317c|gene1348|transcript|Transcript_gene1348|Coding|1/1|c.34G>A|p.Val12Ile|34/1491|34/1491|12/496||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1479085C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1479085C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:53:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:51:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:60:30:30:60:100%:99:1.035E-35:0:0:0:0:61 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:60:25:35:60:100%:99:1.035E-35:0:0:0:0:61 1/1:48:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:49:19:30:49:100%:99:3.925E-29:0:0:0:0:53 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:62:39:23:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:38:10:28:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 MTB_anc 1479672 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv1318c_Rv1318c|gene1349|transcript|Transcript_gene1349|Coding|1/1|c.1153C>T|p.Leu385Leu|1153/1626|1153/1626|385/541||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1479672G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1479672G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:63:0%:99:1E0:46:63:34:29:63 0/0:0:0:0:0:17:0%:33:1E0:52:17:8:9:18 0/0:0:0:0:0:49:0%:93:1E0:48:49:24:25:50 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:30 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:44 0/0:0:0:0:0:8:0%:14:1E0:53:8:3:5:9 0/0:0:0:0:0:53:0%:99:1E0:47:53:27:26:55 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:28 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:55:0%:99:1E0:43:55:32:23:57 0/0:0:0:0:0:28:0%:51:1E0:48:28:10:18:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:29 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:25:0%:48:1E0:48:25:17:8:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:63:0%:99:1E0:47:63:36:27:63 0/0:0:0:0:0:45:0%:85:1E0:46:45:21:24:45 0/0:0:0:0:0:48:0%:89:1E0:45:48:27:21:48 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:47:0%:89:1E0:46:47:30:17:47 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:35 0/0:0:0:0:0:22:0%:40:1E0:49:22:6:16:22 0/0:0:0:0:0:54:0%:99:1E0:42:54:31:23:55 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:22 0/0:0:0:0:0:60:0%:99:1E0:42:60:28:32:60 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:51:0%:97:1E0:43:51:20:31:51 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:60:1:1:0:58:1.72%:94:5E-1:46:57:31:26:58 0/0:0:0:0:0:34:0%:62:1E0:45:34:24:10:34 0/0:0:0:0:0:46:0%:85:1E0:46:46:21:25:46 0/0:0:0:0:0:17:0%:33:1E0:53:17:13:4:17 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:34 0/0:0:0:0:0:29:0%:55:1E0:51:29:11:18:30 0/0:0:0:0:0:12:0%:21:1E0:46:12:5:7:12 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:45:0%:85:1E0:43:45:31:14:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:36 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:46 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:36 0/0:0:0:0:0:18:0%:32:1E0:46:18:7:11:18 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:19:0%:37:1E0:54:19:6:13:19 0/0:0:0:0:0:65:0%:99:1E0:40:65:33:32:66 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:20 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:10:0%:17:1E0:42:10:6:4:10 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:16 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:37:1:1:0:42:2.38%:66:5E-1:44:41:22:19:42 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:29 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:29 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:54 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:46 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:24 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:41 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:35 0/0:0:0:0:0:51:0%:97:1E0:42:51:21:30:52 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:38 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:36 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:46 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:21:7:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:41 0/0:0:0:0:0:28:0%:51:1E0:38:28:19:9:32 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:60:0%:99:1E0:39:60:33:27:60 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:44:0%:81:1E0:39:44:26:18:44 0/0:0:0:0:0:57:0%:99:1E0:42:57:27:30:57 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:56:0%:99:1E0:42:56:26:30:60 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:40 MTB_anc 1480945 . C G . PASS AC=126;AF=0.420;AN=300;ANN=G|synonymous_variant|LOW|Rv1319c_Rv1319c|gene1350|transcript|Transcript_gene1350|Coding|1/1|c.1557G>C|p.Thr519Thr|1557/1608|1557/1608|519/535||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1480945C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1480945C>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:8:6:2:62:12.9%:25:3.0583E-3:41:53:29:24:64 0/1:44:6:2:4:16:37.5%:20:8.837E-3:50:10:5:5:17 0/1:39:10:5:5:52:19.23%:32:6.0611E-4:45:42:18:24:52 0/1:40:7:2:5:32:21.88%:22:5.4182E-3:49:25:12:13:32 0/1:41:9:5:4:33:27.27%:29:1.042E-3:48:24:13:11:33 0/0:41:6:3:3:34:17.65%:23:1.2287E-2:45:28:14:14:34 0/1:44:9:3:6:41:21.95%:29:1.1955E-3:50:32:14:18:41 0/0:60:2:0:2:30:6.67%:37:2.4576E-1:44:28:14:14:31 0/1:47:12:5:7:37:32.43%:40:8.4418E-5:49:25:14:11:38 0/1:47:7:4:3:38:18.42%:22:5.7727E-3:48:31:15:16:38 0/1:45:11:8:3:37:29.73%:36:2.0455E-4:48:26:12:14:37 0/1:39:11:5:6:57:19.3%:35:2.8674E-4:41:46:26:20:57 0/1:46:7:4:3:25:28%:23:4.8126E-3:47:18:7:11:26 0/1:43:12:3:9:68:17.65%:38:1.4358E-4:46:56:24:32:68 0/1:45:13:8:5:42:30.95%:43:4.0777E-5:43:29:12:17:44 0/1:45:11:7:4:44:25%:36:2.3962E-4:43:33:19:14:44 0/1:44:10:7:3:28:35.71%:34:3.6855E-4:49:18:9:9:28 0/1:49:7:5:2:25:28%:23:4.8126E-3:44:18:13:5:26 0/0:37:4:2:2:26:15.38%:20:5.5222E-2:45:22:8:14:26 0/0:48:6:1:5:34:17.65%:23:1.2287E-2:49:28:16:12:35 0/1:43:7:2:5:26:26.92%:23:4.9169E-3:39:19:10:9:27 0/1:45:14:8:6:68:20.59%:45:2.8994E-5:43:54:27:27:68 0/0:43:4:1:3:34:11.76%:31:5.6946E-2:49:30:17:13:34 0/1:41:16:7:9:49:32.65%:54:3.5325E-6:48:33:17:16:49 0/1:39:12:7:5:48:25%:39:1.1153E-4:41:36:18:18:48 0/0:51:6:2:4:22:27.27%:9:1.057E-2:47:16:11:5:22 0/0:60:2:2:0:31:6.45%:40:2.459E-1:42:29:12:17:32 0/1:47:7:3:4:28:25%:22:5.1054E-3:48:21:10:11:28 0/1:44:7:2:5:26:26.92%:23:4.9169E-3:43:19:11:8:26 0/1:47:9:3:6:34:26.47%:29:1.0644E-3:44:25:11:14:35 0/1:48:12:5:7:47:25.53%:39:1.0942E-4:43:35:16:19:47 0/0:40:6:0:6:38:15.79%:28:1.2628E-2:48:32:18:14:38 0/0:43:6:2:4:25:24%:14:1.1145E-2:52:19:14:5:26 0/1:42:9:4:5:36:25%:29:1.1061E-3:40:27:13:14:36 0/1:49:20:12:8:53:37.74%:69:1.0405E-7:48:33:14:19:53 0/0:40:6:2:4:47:12.77%:42:1.3188E-2:43:41:21:20:48 0/1:50:10:3:7:40:25%:32:5.1483E-4:40:30:17:13:41 0/1:45:19:10:9:66:28.79%:63:4.1996E-7:50:47:29:18:67 0/1:47:9:5:4:42:21.43%:29:1.2112E-3:47:33:13:20:42 0/1:45:14:2:12:62:22.58%:45:2.6732E-5:45:48:30:18:63 0/1:38:10:4:6:35:28.57%:33:4.6276E-4:45:25:12:13:35 0/1:40:12:2:10:59:20.34%:38:1.3121E-4:45:47:22:25:61 0/1:37:10:4:6:31:32.26%:33:4.1251E-4:45:21:12:9:31 0/1:40:12:6:6:39:30.77%:40:9.0046E-5:46:27:15:12:39 0/1:37:10:7:3:45:22.22%:32:5.5766E-4:43:35:16:19:45 0/1:42:12:6:6:52:23.08%:39:1.1939E-4:46:40:18:22:52 0/1:38:14:8:6:41:34.15%:47:1.6028E-5:42:27:10:17:41 0/1:41:15:6:9:56:26.79%:49:1.0354E-5:41:41:24:17:57 0/1:38:10:3:7:43:23.26%:32:5.4148E-4:42:33:21:12:45 0/1:41:11:6:5:48:22.92%:35:2.5621E-4:44:37:19:18:49 0/1:45:9:5:4:28:32.14%:30:9.1169E-4:46:19:6:13:29 0/1:41:16:11:5:47:34.04%:54:3.2755E-6:42:31:18:13:47 0/1:45:9:3:6:38:23.68%:29:1.1256E-3:42:28:15:13:38 0/1:39:9:4:5:40:22.5%:29:1.1791E-3:41:31:13:18:40 0/1:37:9:5:4:37:24.32%:29:1.1256E-3:42:28:11:17:37 0/1:43:8:5:3:53:15.09%:25:2.9389E-3:41:45:23:22:54 0/1:41:10:7:3:55:18.18%:32:6.2367E-4:46:45:23:22:55 0/1:42:9:6:3:33:27.27%:29:1.042E-3:43:24:12:12:33 0/1:42:10:5:5:52:19.23%:32:6.0611E-4:44:42:24:18:52 0/1:35:12:7:5:52:23.08%:39:1.1939E-4:47:40:17:23:53 0/1:41:11:8:3:55:20%:35:2.8065E-4:44:44:23:21:55 0/1:41:10:4:6:42:23.81%:32:5.3293E-4:43:32:15:17:42 0/1:42:18:9:9:51:35.29%:62:6.1577E-7:45:33:11:22:51 0/1:44:7:4:3:35:20%:22:5.6095E-3:46:28:16:12:35 0/1:50:7:3:4:48:14.58%:22:6.1774E-3:47:41:21:20:48 0/1:43:18:9:9:62:29.03%:60:9.0099E-7:48:44:19:25:63 0/1:38:11:5:6:37:29.73%:36:2.0455E-4:41:26:17:9:37 0/1:40:12:8:4:60:20%:38:1.3273E-4:44:48:26:22:60 0/0:44:5:1:4:18:27.78%:8:2.2727E-2:49:13:7:6:18 0/1:48:10:6:4:30:33.33%:33:3.9851E-4:45:20:11:9:30 0/1:41:16:9:7:54:29.63%:53:4.1444E-6:48:38:12:26:54 0/1:41:10:6:4:35:28.57%:33:4.6276E-4:45:25:7:18:35 0/1:41:7:7:0:29:24.14%:22:5.1909E-3:50:22:13:9:29 0/1:45:11:6:5:47:23.4%:35:2.5227E-4:52:36:18:18:48 0/1:41:18:7:11:57:31.58%:61:7.7462E-7:44:39:20:19:58 0/1:48:8:3:5:33:24.24%:26:2.4173E-3:47:25:12:13:34 0/0:37:6:6:0:37:16.22%:28:1.2549E-2:39:31:12:19:37 0/1:44:13:6:7:43:30.23%:43:4.2025E-5:48:30:18:12:43 0/1:45:7:6:1:28:25%:22:5.1054E-3:44:21:8:13:28 0/1:43:14:8:6:47:29.79%:47:1.9604E-5:46:33:16:17:47 0/1:41:11:8:3:42:26.19%:36:2.3046E-4:41:31:17:14:43 0/1:40:12:4:8:64:18.75%:38:1.3842E-4:44:52:38:14:64 0/1:40:14:9:5:50:28%:46:2.1224E-5:45:36:16:20:50 0/1:43:15:8:7:41:36.59%:51:6.364E-6:45:26:11:15:41 0/1:41:12:9:3:44:27.27%:39:1.027E-4:41:32:13:19:45 0/1:37:9:4:5:49:18.37%:28:1.3055E-3:40:40:20:20:49 0/0:42:4:1:3:35:11.43%:35:5.7106E-2:43:31:14:17:35 0/0:46:4:3:1:28:14.29%:23:5.5746E-2:48:24:6:18:28 0/1:44:11:6:5:52:21.15%:35:2.7081E-4:47:41:18:23:52 0/1:41:10:4:6:34:29.41%:33:4.51E-4:44:24:9:15:34 0/1:47:11:5:6:45:24.44%:36:2.4398E-4:44:34:18:16:45 0/1:52:12:6:6:43:27.91%:39:1.0032E-4:53:31:19:12:43 0/1:42:12:6:6:54:22.22%:39:1.23E-4:40:42:24:18:55 0/1:37:11:6:5:44:25%:36:2.3962E-4:44:33:16:17:44 0/1:39:19:10:9:63:30.16%:64:3.8563E-7:42:44:24:20:63 0/1:45:11:8:3:33:33.33%:37:1.8019E-4:41:22:10:12:33 0/0:44:6:1:5:40:15%:30:1.2773E-2:42:34:19:15:42 0/1:39:9:3:6:34:26.47%:29:1.0644E-3:46:25:15:10:34 0/1:41:8:2:6:46:17.39%:25:2.8033E-3:43:38:18:20:46 0/1:43:11:6:5:54:20.37%:35:2.7747E-4:44:43:15:28:55 0/1:48:10:3:7:44:22.73%:32:5.4972E-4:44:34:15:19:44 0/1:43:12:8:4:41:29.27%:40:9.5339E-5:46:29:15:14:41 0/1:35:10:5:5:36:27.78%:33:4.7404E-4:41:26:14:12:41 0/0:37:6:5:1:33:18.18%:23:1.219E-2:41:27:12:15:33 0/0:40:5:1:4:30:16.67%:21:2.6093E-2:45:25:11:14:31 0/1:46:7:3:4:32:21.88%:22:5.4182E-3:44:25:11:14:32 0/1:41:14:5:9:38:36.84%:48:1.407E-5:46:24:14:10:38 0/1:42:7:4:3:36:19.44%:22:5.6667E-3:47:29:11:18:36 0/1:45:9:2:7:45:20%:29:1.2547E-3:45:36:21:15:46 0/1:42:8:2:6:38:21.05%:25:2.5935E-3:44:30:19:11:39 0/1:40:13:6:7:43:30.23%:43:4.2025E-5:43:30:15:15:43 0/0:40:6:1:5:37:16.22%:28:1.2549E-2:42:31:13:18:38 0/1:44:8:4:4:29:27.59%:26:2.2392E-3:45:21:10:11:30 0/1:45:11:6:5:46:23.91%:36:2.4819E-4:44:35:15:20:46 0/1:38:10:3:7:41:24.39%:32:5.2405E-4:42:31:12:19:43 0/1:42:12:5:7:61:19.67%:38:1.3421E-4:38:49:24:25:63 0/1:36:11:7:4:45:24.44%:36:2.4398E-4:40:34:16:18:46 0/1:44:13:8:5:40:32.5%:44:3.8184E-5:49:27:15:12:40 0/0:39:5:1:4:33:15.15%:27:2.6557E-2:43:28:13:15:34 0/1:39:18:14:4:65:27.69%:60:9.7371E-7:44:47:23:24:65 0/1:44:23:10:13:69:33.33%:78:1.315E-8:44:46:20:26:69 0/1:39:12:9:3:43:27.91%:40:9.7866E-5:44:30:12:18:43 0/0:46:5:3:2:33:15.15%:27:2.6557E-2:41:28:15:13:34 0/1:42:15:8:7:58:25.86%:49:1.0808E-5:41:43:22:21:58 0/1:45:10:5:5:46:21.74%:32:5.6532E-4:41:36:15:21:48 0/1:41:13:6:7:62:20.97%:42:6.0557E-5:41:49:22:27:63 0/1:39:14:4:10:51:27.45%:46:2.1741E-5:38:37:23:14:52 0/1:41:9:2:7:53:16.98%:28:1.3495E-3:41:44:20:24:53 0/0:43:6:0:6:41:14.63%:33:1.2841E-2:43:35:13:22:42 0/1:37:16:8:8:47:34.04%:54:3.2755E-6:43:31:12:19:49 0/1:43:8:4:4:30:26.67%:26:2.2875E-3:39:22:11:11:31 0/1:43:15:6:9:57:26.32%:49:1.0583E-5:40:42:18:24:57 0/1:37:8:4:4:44:18.18%:25:2.7573E-3:42:36:17:19:44 0/1:42:13:4:9:46:28.26%:43:4.5578E-5:42:33:14:19:46 0/1:37:14:6:8:41:34.15%:47:1.6028E-5:40:27:14:13:43 0/1:36:12:5:7:44:27.27%:39:1.027E-4:39:32:18:14:44 0/1:36:17:8:9:61:27.87%:56:2.091E-6:40:44:16:28:62 0/1:39:16:8:8:40:40%:56:2.3315E-6:39:24:11:13:41 0/1:44:9:5:4:49:18.37%:28:1.3055E-3:46:40:19:21:49 0/0:40:6:2:4:44:13.64%:36:1.3026E-2:39:38:17:21:44 0/1:39:7:3:4:56:12.5%:21:6.4016E-3:44:49:25:24:57 0/1:43:11:6:5:25:44%:39:1.1933E-4:42:14:5:9:25 0/1:43:16:11:5:57:28.07%:53:4.4899E-6:43:41:23:18:57 0/1:41:11:4:7:47:23.4%:35:2.5227E-4:42:36:13:23:48 0/1:43:12:7:5:44:27.27%:39:1.027E-4:40:32:13:19:44 0/0:41:4:3:1:29:13.79%:26:5.5981E-2:42:25:10:15:29 0/0:42:5:2:3:46:10.87%:44:2.7874E-2:42:41:17:24:46 0/1:42:8:6:2:61:13.11%:25:3.0583E-3:41:53:29:24:61 0/1:42:19:8:11:68:27.94%:63:4.1996E-7:42:47:24:23:68 0/1:40:13:5:8:58:22.41%:42:5.7349E-5:42:45:20:25:58 MTB_anc 1480948 . C T . PASS AC=130;AF=0.433;AN=300;ANN=T|synonymous_variant|LOW|Rv1319c_Rv1319c|gene1350|transcript|Transcript_gene1350|Coding|1/1|c.1554G>A|p.Glu518Glu|1554/1608|1554/1608|518/535||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1480948C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1480948C>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:10:8:2:62:16.13%:31:6.5891E-4:42:52:29:23:65 0/1:42:7:2:5:17:41.18%:24:3.6151E-3:49:10:5:5:17 0/1:39:12:5:7:55:21.82%:39:1.2473E-4:45:43:18:25:55 0/1:38:7:2:5:33:21.21%:22:5.4855E-3:48:26:13:13:33 0/1:41:8:5:3:33:24.24%:26:2.4173E-3:47:25:14:11:34 0/0:41:6:3:3:33:18.18%:23:1.219E-2:45:27:14:13:34 0/1:46:9:3:6:42:21.43%:29:1.2112E-3:49:33:15:18:42 0/0:47:4:2:2:32:12.5%:29:5.6596E-2:44:28:14:14:32 0/1:48:12:5:7:37:32.43%:40:8.4418E-5:49:25:14:11:38 0/1:47:7:4:3:37:18.92%:22:5.721E-3:49:30:15:15:37 0/1:46:11:8:3:37:29.73%:36:2.0455E-4:48:26:12:14:37 0/1:38:11:6:5:55:20%:35:2.8065E-4:42:44:24:20:58 0/1:48:7:4:3:25:28%:23:4.8126E-3:45:18:7:11:25 0/1:41:12:3:9:66:18.18%:38:1.4106E-4:44:54:23:31:66 0/1:45:13:8:5:42:30.95%:43:4.0777E-5:43:29:13:16:43 0/1:45:11:7:4:42:26.19%:36:2.3046E-4:43:31:19:12:44 0/1:44:10:7:3:27:37.04%:34:3.5253E-4:48:17:9:8:27 0/1:49:8:5:3:27:29.63%:26:2.1337E-3:43:19:13:6:27 0/0:35:4:2:2:25:16%:21:5.4928E-2:45:21:8:13:25 0/1:45:7:1:6:35:20%:22:5.6095E-3:48:28:16:12:35 0/1:44:7:2:5:26:26.92%:23:4.9169E-3:40:19:11:8:27 0/1:43:14:8:6:67:20.9%:45:2.8637E-5:42:53:27:26:67 0/0:43:4:1:3:34:11.76%:31:5.6946E-2:49:30:17:13:34 0/1:42:17:7:10:47:36.17%:58:1.3018E-6:49:30:17:13:48 0/1:39:13:8:5:49:26.53%:43:4.8866E-5:40:36:18:18:49 0/1:52:7:2:5:23:30.43%:23:4.5803E-3:45:16:11:5:23 0/0:51:3:2:1:33:9.09%:37:1.1923E-1:41:30:12:18:34 0/1:47:7:3:4:29:24.14%:22:5.1909E-3:48:22:11:11:29 0/1:43:8:2:6:27:29.63%:26:2.1337E-3:43:19:11:8:27 0/1:47:9:3:6:35:25.71%:29:1.0857E-3:42:26:11:15:35 0/1:48:12:5:7:47:25.53%:39:1.0942E-4:44:35:16:19:47 0/1:39:8:1:7:41:19.51%:25:2.6808E-3:47:33:19:14:41 0/0:43:6:2:4:24:25%:11:1.0968E-2:53:18:13:5:26 0/1:42:9:4:5:36:25%:29:1.1061E-3:39:27:13:14:36 0/1:49:20:12:8:52:38.46%:70:9.8643E-8:48:32:13:19:52 0/1:38:7:2:5:46:15.22%:22:6.1097E-3:42:39:20:19:47 0/1:49:11:3:8:39:28.21%:36:2.1547E-4:40:28:16:12:39 0/1:44:19:10:9:66:28.79%:63:4.1996E-7:50:47:29:18:67 0/1:45:10:5:5:43:23.26%:32:5.4148E-4:46:33:13:20:43 0/1:45:14:2:12:63:22.22%:45:2.713E-5:44:49:31:18:63 0/1:37:10:4:6:36:27.78%:33:4.7404E-4:43:26:12:14:36 0/1:41:12:2:10:59:20.34%:38:1.3121E-4:44:47:22:25:60 0/1:38:10:4:6:30:33.33%:33:3.9851E-4:45:20:12:8:31 0/1:40:12:6:6:39:30.77%:40:9.0046E-5:45:27:14:13:40 0/1:36:10:7:3:46:21.74%:32:5.6532E-4:43:36:16:20:46 0/1:45:11:6:5:51:21.57%:35:2.6733E-4:45:40:18:22:52 0/1:38:13:7:6:41:31.71%:44:3.9497E-5:41:28:11:17:42 0/1:40:16:7:9:56:28.57%:53:4.3766E-6:41:40:24:16:58 0/1:40:11:3:8:43:25.58%:36:2.3512E-4:42:32:21:11:43 0/1:40:12:6:6:48:25%:39:1.1153E-4:43:36:19:17:50 0/1:44:9:5:4:29:31.03%:30:9.4048E-4:45:20:6:14:29 0/1:43:16:11:5:46:34.78%:55:3.1446E-6:42:30:18:12:48 0/1:46:9:3:6:37:24.32%:29:1.1256E-3:43:28:15:13:38 0/1:40:8:4:4:39:20.51%:25:2.624E-3:41:31:13:18:40 0/1:37:9:5:4:36:25%:29:1.1061E-3:42:27:11:16:37 0/1:42:9:6:3:56:16.07%:28:1.3788E-3:40:47:25:22:56 0/1:44:10:7:3:54:18.52%:32:6.18E-4:45:44:22:22:55 0/1:40:9:6:3:33:27.27%:29:1.042E-3:43:24:12:12:33 0/1:42:9:5:4:49:18.37%:28:1.3055E-3:45:40:23:17:52 0/1:40:12:7:5:52:23.08%:39:1.1939E-4:46:40:17:23:52 0/1:44:11:8:3:51:21.57%:35:2.6733E-4:44:40:22:18:54 0/1:40:11:5:6:42:26.19%:36:2.3046E-4:42:31:15:16:43 0/1:42:18:9:9:51:35.29%:62:6.1577E-7:44:33:11:22:51 0/1:46:7:4:3:35:20%:22:5.6095E-3:45:28:16:12:35 0/1:53:7:3:4:48:14.58%:22:6.1774E-3:46:41:21:20:48 0/1:43:18:9:9:63:28.57%:60:9.255E-7:47:45:20:25:64 0/1:39:11:5:6:36:30.56%:37:1.9879E-4:40:25:16:9:36 0/1:41:12:8:4:59:20.34%:38:1.3121E-4:44:47:26:21:59 0/0:43:5:1:4:18:27.78%:8:2.2727E-2:49:13:7:6:18 0/1:47:9:6:3:30:30%:30:9.678E-4:45:21:11:10:30 0/1:42:16:9:7:52:30.77%:54:3.905E-6:47:36:11:25:53 0/1:41:10:6:4:34:29.41%:33:4.51E-4:46:24:7:17:34 0/1:40:7:7:0:29:24.14%:22:5.1909E-3:50:22:13:9:29 0/1:45:11:6:5:48:22.92%:35:2.5621E-4:50:37:19:18:48 0/1:40:17:7:10:53:32.08%:57:1.655E-6:44:36:18:18:58 0/1:48:8:3:5:35:22.86%:26:2.4931E-3:46:27:13:14:35 0/0:37:6:6:0:36:16.67%:25:1.2467E-2:38:30:12:18:37 0/1:43:13:6:7:42:30.95%:43:4.0777E-5:49:29:18:11:42 0/1:46:7:6:1:28:25%:22:5.1054E-3:44:21:8:13:28 0/1:43:14:8:6:44:31.82%:47:1.7873E-5:45:30:14:16:46 0/1:42:13:9:4:42:30.95%:43:4.0777E-5:41:29:17:12:43 0/1:40:13:4:9:63:20.63%:42:6.1313E-5:43:50:38:12:64 0/1:41:14:9:5:50:28%:46:2.1224E-5:44:36:16:20:50 0/1:42:15:8:7:40:37.5%:52:6.0618E-6:45:25:11:14:41 0/1:42:13:10:3:45:28.89%:43:4.4424E-5:40:32:13:19:45 0/1:36:9:4:5:49:18.37%:28:1.3055E-3:40:40:20:20:49 0/0:40:5:2:3:36:13.89%:29:2.6944E-2:44:31:15:16:36 0/0:48:4:3:1:28:14.29%:23:5.5746E-2:47:24:6:18:28 0/1:46:11:6:5:51:21.57%:35:2.6733E-4:46:40:17:23:51 0/1:41:11:5:6:33:33.33%:37:1.8019E-4:43:22:8:14:34 0/1:47:11:5:6:45:24.44%:36:2.4398E-4:44:34:18:16:45 0/1:51:12:6:6:44:27.27%:39:1.027E-4:52:32:19:13:44 0/1:41:14:7:7:57:24.56%:46:2.4613E-5:40:43:24:19:58 0/1:38:11:6:5:43:25.58%:36:2.3512E-4:43:32:16:16:43 0/1:40:21:11:10:62:33.87%:72:6.1853E-8:41:41:22:19:63 0/1:46:12:8:4:34:35.29%:41:7.5302E-5:41:22:10:12:34 0/0:44:6:1:5:43:13.95%:36:1.2967E-2:40:37:21:16:43 0/1:38:10:4:6:35:28.57%:33:4.6276E-4:46:25:15:10:35 0/1:41:8:2:6:46:17.39%:25:2.8033E-3:42:38:18:20:46 0/1:41:12:7:5:55:21.82%:39:1.2473E-4:44:43:16:27:56 0/1:48:10:3:7:44:22.73%:32:5.4972E-4:43:34:15:19:44 0/1:43:11:7:4:41:26.83%:36:2.2563E-4:45:30:16:14:42 0/1:34:11:5:6:36:30.56%:37:1.9879E-4:41:25:14:11:39 0/0:37:6:5:1:31:19.35%:20:1.1977E-2:41:25:10:15:31 0/0:39:5:1:4:30:16.67%:21:2.6093E-2:43:25:11:14:30 0/1:46:7:3:4:31:22.58%:22:5.3469E-3:44:24:11:13:31 0/1:41:14:5:9:38:36.84%:48:1.407E-5:47:24:14:10:38 0/1:42:7:4:3:36:19.44%:22:5.6667E-3:46:29:11:18:36 0/1:42:10:3:7:46:21.74%:32:5.6532E-4:44:36:21:15:47 0/1:42:8:2:6:40:20%:25:2.653E-3:42:32:19:13:40 0/1:42:14:7:7:44:31.82%:47:1.7873E-5:43:30:15:15:44 0/0:38:6:1:5:38:15.79%:28:1.2628E-2:40:32:13:19:38 0/1:43:9:4:5:30:30%:30:9.678E-4:43:21:10:11:30 0/1:43:11:6:5:44:25%:36:2.3962E-4:44:33:14:19:44 0/1:38:8:2:6:41:19.51%:25:2.6808E-3:40:33:14:19:43 0/1:40:13:5:8:60:21.67%:42:5.8991E-5:38:47:22:25:61 0/1:36:13:7:6:45:28.89%:43:4.4424E-5:38:32:16:16:46 0/1:43:14:9:5:40:35%:48:1.5388E-5:48:26:14:12:42 0/0:40:5:1:4:33:15.15%:27:2.6557E-2:42:28:13:15:34 0/1:38:18:14:4:65:27.69%:60:9.7371E-7:43:47:23:24:66 0/1:44:23:10:13:70:32.86%:78:1.3659E-8:42:47:20:27:70 0/1:38:12:9:3:43:27.91%:39:1.0032E-4:44:31:13:18:43 0/0:44:6:3:3:33:18.18%:23:1.219E-2:42:27:14:13:34 0/1:43:13:7:6:56:23.21%:42:5.5625E-5:41:43:23:20:59 0/1:46:9:5:4:47:19.15%:28:1.2811E-3:39:38:16:22:49 0/1:37:14:6:8:64:21.88%:45:2.7518E-5:40:50:24:26:65 0/1:41:14:4:10:49:28.57%:46:2.0696E-5:38:35:21:14:52 0/1:40:10:2:8:50:20%:32:5.9342E-4:41:40:17:23:53 0/0:43:6:0:6:39:15.38%:31:1.2702E-2:45:33:13:20:41 0/1:39:17:8:9:47:36.17%:58:1.3018E-6:42:30:12:18:48 0/1:40:9:4:5:30:30%:30:9.678E-4:40:21:11:10:31 0/1:42:16:6:10:56:28.57%:53:4.3766E-6:40:40:18:22:58 0/1:35:8:4:4:43:18.6%:25:2.7329E-3:41:35:16:19:45 0/1:40:14:4:10:44:31.82%:47:1.7873E-5:42:30:14:16:47 0/1:36:13:6:7:39:33.33%:44:3.6837E-5:39:26:13:13:42 0/1:37:11:5:6:41:26.83%:36:2.2563E-4:39:30:18:12:42 0/1:36:15:7:8:60:25%:49:1.1245E-5:39:45:17:28:62 0/1:39:17:8:9:40:42.5%:60:8.743E-7:37:23:10:13:40 0/1:44:9:5:4:49:18.37%:28:1.3055E-3:46:40:19:21:49 0/0:41:6:2:4:45:13.33%:39:1.3082E-2:38:39:18:21:45 0/1:38:8:3:5:58:13.79%:25:3.0172E-3:44:50:26:24:58 0/1:42:12:6:6:26:46.15%:43:4.6796E-5:40:14:5:9:26 0/1:41:17:12:5:58:29.31%:57:1.9326E-6:42:41:23:18:58 0/1:41:11:4:7:49:22.45%:35:2.6004E-4:41:38:14:24:49 0/1:43:12:7:5:44:27.27%:39:1.027E-4:39:32:14:18:45 0/0:47:4:3:1:30:13.33%:26:5.62E-2:41:26:10:16:30 0/0:42:5:2:3:46:10.87%:44:2.7874E-2:42:41:17:24:46 0/1:41:8:6:2:62:12.9%:25:3.0712E-3:41:54:29:25:62 0/1:42:19:8:11:66:28.79%:63:4.1996E-7:41:47:23:24:69 0/1:39:13:5:8:59:22.03%:42:5.818E-5:41:46:20:26:59 MTB_anc 1480972 . T C . PASS AC=150;AF=0.500;AN=300;ANN=C|synonymous_variant|LOW|Rv1319c_Rv1319c|gene1350|transcript|Transcript_gene1350|Coding|1/1|c.1530A>G|p.Glu510Glu|1530/1608|1530/1608|510/535||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1480972T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1480972T>C||||||;HET=1;HOM=0;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:51:29:22:65:78.46%:99:1.3088E-23:45:14:11:3:67 0/1:49:9:4:5:20:45%:32:6.1425E-4:44:11:4:7:20 0/1:45:46:19:27:61:75.41%:99:7.4112E-21:45:15:7:8:61 0/1:46:27:13:14:38:71.05%:99:4.2271E-12:47:11:5:6:38 0/1:49:27:17:10:38:71.05%:99:4.2271E-12:43:11:6:5:39 0/1:43:27:13:14:37:72.97%:99:2.9655E-12:40:10:6:4:37 0/1:50:33:15:18:42:78.57%:99:1.8121E-15:50:9:3:6:42 0/1:43:26:15:11:32:81.25%:99:1.5064E-12:48:6:3:3:32 0/1:49:27:14:13:42:64.29%:99:1.3138E-11:51:15:6:9:43 0/1:47:28:16:12:37:75.68%:99:6.3095E-13:52:9:5:4:39 0/1:46:26:13:13:42:61.9%:99:4.7626E-11:46:16:12:4:42 0/1:40:49:27:22:67:73.13%:99:8.0522E-22:36:18:8:10:67 0/1:45:19:9:10:31:61.29%:74:3.2956E-8:48:12:5:7:31 0/1:44:56:22:34:71:78.87%:99:5.8459E-26:44:15:5:10:71 0/1:45:27:13:14:43:62.79%:99:1.6529E-11:45:16:9:7:44 0/1:44:29:18:11:43:67.44%:99:1.1593E-12:47:14:9:5:44 0/1:48:15:6:9:29:51.72%:55:2.6068E-6:45:14:8:6:29 0/1:42:19:13:6:31:61.29%:74:3.2956E-8:48:12:7:5:31 0/1:46:21:9:12:26:80.77%:94:3.4262E-10:37:5:2:3:27 0/1:50:27:16:11:36:75%:99:2.0026E-12:44:9:1:8:37 0/1:40:20:12:8:34:58.82%:77:1.6951E-8:42:14:7:7:37 0/1:43:48:24:24:65:73.85%:99:1.7045E-21:45:17:10:7:66 0/1:51:28:16:12:34:82.35%:99:1.349E-13:41:6:1:5:34 0/1:44:32:17:15:51:62.75%:99:1.5887E-13:44:19:7:12:52 0/1:41:37:18:19:56:66.07%:99:7.3439E-16:40:19:11:8:56 0/1:44:15:10:5:23:65.22%:60:9.5813E-7:53:8:2:6:23 0/1:42:25:9:16:30:83.33%:99:2.745E-12:50:5:4:1:31 0/1:47:23:12:11:30:76.67%:99:8.7055E-11:47:7:3:4:30 0/1:45:18:9:9:28:64.29%:72:6.1806E-8:44:10:4:6:28 0/1:42:27:13:14:44:61.36%:99:2.0452E-11:45:17:8:9:45 0/1:44:34:14:20:49:69.39%:99:6.2611E-15:49:15:8:7:50 0/1:45:34:19:15:45:75.56%:99:1.4341E-15:43:11:2:9:45 0/1:49:22:15:7:33:66.67%:89:1.0623E-9:47:11:3:8:33 0/1:39:25:13:12:37:67.57%:99:5.2839E-11:40:12:6:6:40 0/1:47:33:11:22:56:58.93%:99:1.2461E-13:50:23:13:10:56 0/1:43:38:21:17:47:80.85%:99:4.6601E-18:40:9:3:6:48 0/1:40:28:15:13:43:65.12%:99:4.4825E-12:46:15:5:10:44 0/1:49:45:27:18:69:65.22%:99:3.5446E-19:48:23:11:12:71 0/1:45:34:14:20:47:72.34%:99:3.1782E-15:44:13:6:7:47 0/1:45:52:34:18:73:71.23%:99:8.0968E-23:46:21:6:15:73 0/1:42:27:13:14:41:65.85%:99:1.0249E-11:40:14:7:7:42 0/1:45:42:20:22:59:71.19%:99:1.5693E-18:43:17:6:11:59 0/1:43:19:11:8:29:65.52%:76:2.1144E-8:41:10:4:6:30 0/1:45:24:12:12:45:53.33%:90:8.5784E-10:42:21:11:10:45 0/1:43:35:18:17:46:76.09%:99:4.4915E-16:39:11:8:3:49 0/1:46:37:19:18:54:68.52%:99:4.1669E-16:43:17:8:9:54 0/1:43:28:13:15:43:65.12%:99:4.4825E-12:42:15:9:6:43 0/1:41:39:24:15:57:68.42%:99:6.1741E-17:41:18:6:12:58 0/1:41:32:21:11:46:69.57%:99:4.2225E-14:40:14:4:10:46 0/1:43:38:19:19:53:71.7%:99:7.0728E-17:41:15:8:7:53 0/1:43:21:5:16:31:67.74%:86:2.4087E-9:44:10:6:4:31 0/1:41:27:15:12:51:52.94%:99:6.451E-11:42:24:15:9:53 0/1:41:27:13:14:36:75%:99:2.0026E-12:50:9:3:6:38 0/1:42:26:9:17:38:68.42%:99:1.7613E-11:39:12:5:7:38 0/1:41:28:12:16:46:60.87%:99:8.7676E-12:42:18:9:9:47 0/1:42:50:26:24:63:79.37%:99:2.5307E-23:42:13:7:6:63 0/1:45:40:22:18:62:64.52%:99:6.161E-17:42:22:10:12:62 0/1:43:24:13:11:34:70.59%:99:8.7205E-11:42:10:6:4:34 0/1:46:35:21:14:53:66.04%:99:4.954E-15:43:18:9:9:53 0/1:47:39:16:23:52:75%:99:1.0373E-17:41:13:7:6:53 0/1:46:44:26:18:61:72.13%:99:1.6365E-19:44:17:11:6:61 0/1:42:33:16:17:47:70.21%:99:1.3848E-14:41:14:7:7:47 0/1:42:31:10:21:51:60.78%:99:5.6397E-13:41:20:11:9:52 0/1:48:26:14:12:35:74.29%:99:6.3192E-12:46:9:5:4:35 0/1:44:42:22:20:51:82.35%:99:3.6994E-20:50:9:5:4:51 0/1:44:42:20:22:65:64.62%:99:9.1505E-18:46:23:13:10:65 0/1:42:24:13:11:37:64.86%:96:2.0323E-10:39:13:6:7:38 0/1:45:45:25:20:61:73.77%:99:3.5667E-20:40:16:11:5:61 0/1:51:11:5:6:18:61.11%:42:5.2969E-5:44:7:3:4:18 0/1:45:23:12:11:33:69.7%:95:2.6558E-10:51:10:7:3:33 0/1:45:38:12:26:57:66.67%:99:2.4696E-16:42:19:10:9:57 0/1:45:23:6:17:34:67.65%:94:3.5675E-10:44:11:7:4:34 0/1:51:22:13:9:31:70.97%:92:5.875E-10:42:9:8:1:32 0/1:51:36:21:15:50:72%:99:4.7433E-16:48:14:7:7:50 0/1:41:43:24:19:64:67.19%:99:1.8143E-18:40:21:7:14:64 0/1:47:26:12:14:36:72.22%:99:9.2118E-12:47:10:4:6:36 0/1:39:25:9:16:32:78.12%:99:8.3928E-12:41:7:6:1:33 0/1:48:28:16:12:45:62.22%:99:7.1237E-12:46:17:8:9:48 0/1:44:21:9:12:33:63.64%:83:3.9837E-9:43:12:8:4:33 0/1:45:28:12:16:45:62.22%:99:7.1237E-12:42:17:11:6:45 0/1:40:28:16:12:44:63.64%:99:5.6997E-12:42:16:12:4:45 0/1:43:55:41:14:74:74.32%:99:1.2305E-24:39:19:6:13:74 0/1:44:38:18:20:52:73.08%:99:4.8901E-17:44:14:8:6:53 0/1:47:20:9:11:37:54.05%:75:2.7004E-8:44:17:9:8:38 0/1:41:36:14:22:54:66.67%:99:1.6668E-15:41:18:13:5:54 0/1:41:40:21:19:51:78.43%:99:1.2719E-18:36:11:5:6:51 0/1:44:31:14:17:39:79.49%:99:1.1554E-14:43:8:4:4:40 0/1:45:24:7:17:29:82.76%:99:9.2544E-12:44:5:4:1:29 0/1:47:39:15:24:53:73.58%:99:1.5602E-17:51:14:7:7:53 0/1:41:30:11:19:45:66.67%:99:5.1233E-13:42:15:7:8:45 0/1:45:32:15:17:45:71.11%:99:3.0393E-14:48:13:6:7:45 0/1:50:32:20:12:45:71.11%:99:3.0393E-14:53:13:7:6:46 0/1:39:43:22:21:62:69.35%:99:9.9575E-19:41:19:9:10:62 0/1:42:35:20:15:48:72.92%:99:1.0204E-15:40:13:7:6:48 0/1:41:43:21:22:68:63.24%:99:5.0547E-18:41:25:13:12:70 0/1:42:20:8:12:34:58.82%:77:1.6951E-8:46:14:9:5:34 0/1:39:38:23:15:45:84.44%:99:1.2885E-18:45:7:1:6:46 0/1:43:27:17:10:39:69.23%:99:5.8329E-12:45:12:5:7:39 0/1:41:40:21:19:49:81.63%:99:4.1797E-19:43:9:2:7:51 0/1:43:41:15:26:55:74.55%:99:1.5691E-18:44:14:9:5:55 0/1:42:33:14:19:43:76.74%:99:2.9377E-15:49:10:3:7:43 0/1:42:29:15:14:45:64.44%:99:1.9533E-12:45:16:10:6:46 0/1:41:25:13:12:39:64.1%:99:8.8326E-11:38:14:7:7:40 0/1:41:24:8:16:34:70.59%:99:6.1763E-11:37:9:6:3:34 0/1:44:26:10:16:31:83.87%:99:8.0999E-13:41:5:1:4:31 0/1:42:21:10:11:30:70%:87:1.7919E-9:45:9:4:5:32 0/1:46:24:14:10:44:54.55%:91:7.4746E-10:43:20:7:13:44 0/1:45:31:11:20:41:75.61%:99:3.008E-14:41:10:7:3:42 0/1:46:28:18:10:45:62.22%:99:7.1237E-12:46:17:6:11:46 0/1:44:32:19:13:42:76.19%:99:9.4228E-15:45:10:2:8:42 0/1:44:29:16:13:44:65.91%:99:1.5199E-12:42:15:7:8:44 0/1:40:31:13:18:39:79.49%:99:1.1554E-14:49:8:1:7:39 0/1:45:19:9:10:32:59.38%:73:3.9837E-8:43:13:6:7:32 0/1:43:31:12:19:48:64.58%:99:2.9027E-13:43:17:11:6:48 0/1:40:30:11:19:44:68.18%:99:3.8642E-13:38:14:4:10:46 0/1:40:49:25:24:61:80.33%:99:4.7968E-23:43:12:5:7:65 0/1:38:35:16:19:48:72.92%:99:1.0204E-15:38:13:8:5:50 0/1:47:28:15:13:45:62.22%:99:7.1237E-12:43:17:12:5:46 0/1:39:27:12:15:33:81.82%:99:4.5192E-13:39:6:2:4:36 0/1:43:50:22:28:74:67.57%:99:1.9661E-21:40:24:16:8:74 0/1:42:45:19:26:71:63.38%:99:7.5261E-19:45:26:14:12:72 0/1:44:31:12:19:45:68.89%:99:1.2808E-13:39:14:9:5:45 0/1:39:26:13:13:33:78.79%:99:2.5824E-12:45:7:4:3:33 0/1:41:42:22:20:62:67.74%:99:4.0826E-18:45:20:10:10:65 0/1:39:37:13:24:51:72.55%:99:1.5263E-16:45:14:9:5:51 0/1:40:47:23:24:64:73.44%:99:5.3629E-21:40:17:7:10:66 0/1:39:43:26:17:61:70.49%:99:7.1823E-19:41:18:6:12:61 0/1:41:39:18:21:53:73.58%:99:1.5602E-17:40:14:5:9:55 0/1:40:36:13:23:43:83.72%:99:1.5048E-17:45:7:0:7:43 0/1:40:31:13:18:53:58.49%:99:8.2315E-13:39:22:9:13:54 0/1:38:21:8:13:33:63.64%:83:3.9837E-9:37:12:7:5:34 0/1:38:39:17:22:59:66.1%:99:1.0886E-16:40:20:8:12:65 0/1:42:36:16:20:50:72%:99:4.7433E-16:36:14:6:8:50 0/1:41:29:13:16:46:63.04%:99:2.4659E-12:41:17:6:11:49 0/1:38:26:13:13:41:63.41%:99:3.8262E-11:40:15:7:8:43 0/1:40:25:12:13:40:62.5%:99:1.1069E-10:36:15:7:8:41 0/1:39:45:18:27:65:69.23%:99:1.4768E-19:38:20:10:10:65 0/1:39:25:10:15:44:56.82%:96:2.3358E-10:39:19:9:10:44 0/1:44:36:18:18:53:67.92%:99:1.2559E-15:46:17:9:8:53 0/1:37:36:17:19:46:78.26%:99:8.6678E-17:37:10:3:7:46 0/1:44:50:26:24:59:84.75%:99:2.0233E-24:38:9:4:5:60 0/1:40:14:5:9:27:51.85%:52:6.1806E-6:42:13:6:7:27 0/1:42:39:19:20:58:67.24%:99:8.2679E-17:44:19:13:6:58 0/1:42:36:14:22:48:75%:99:2.1746E-16:42:12:5:7:49 0/1:38:32:14:18:47:68.09%:99:5.7239E-14:46:15:9:6:47 0/1:42:28:14:14:33:84.85%:99:6.9527E-14:47:5:4:1:33 0/1:42:38:16:22:46:82.61%:99:2.5328E-18:40:8:3:5:46 0/1:42:52:27:25:61:85.25%:99:1.6967E-25:45:9:6:3:63 0/1:41:53:28:25:78:67.95%:99:9.6771E-23:42:25:12:13:79 0/1:39:48:22:26:66:72.73%:99:1.7045E-21:39:17:8:9:66 MTB_anc 1481185 . A C . PASS AC=148;AF=0.493;AN=300;ANN=C|missense_variant|MODERATE|Rv1319c_Rv1319c|gene1350|transcript|Transcript_gene1350|Coding|1/1|c.1317T>G|p.Asp439Glu|1317/1608|1317/1608|439/535||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1481185A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1481185A>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:49:29:20:87:56.32%:99:1.1808E-19:43:38:24:14:89 0/1:51:13:6:7:30:43.33%:46:2.3178E-5:48:17:12:5:31 0/1:45:50:26:24:89:56.18%:99:5.0052E-20:45:39:22:17:91 0/1:43:21:13:8:51:41.18%:74:3.5259E-8:46:30:13:17:53 0/1:50:31:22:9:58:53.45%:99:1.5588E-12:46:26:15:11:59 0/1:45:23:15:8:52:44.23%:82:5.1348E-9:45:29:13:16:52 0/1:46:31:22:9:66:46.97%:99:4.4405E-12:47:35:17:18:66 0/1:43:27:18:9:47:57.45%:99:3.5655E-11:45:20:11:9:48 0/1:44:27:17:10:59:45.76%:98:1.5211E-10:43:32:15:17:61 0/1:48:26:15:11:45:57.78%:99:8.3984E-11:48:19:12:7:45 0/1:47:22:10:12:48:45.83%:79:1.0268E-8:47:26:18:8:48 0/1:43:50:32:18:88:56.82%:99:4.2509E-20:43:38:27:11:89 0/1:49:16:9:7:36:44.44%:57:1.7753E-6:48:20:6:14:36 0/1:41:45:26:19:81:55.56%:99:5.0311E-18:43:36:23:13:85 0/1:42:26:8:18:51:50.98%:97:1.9611E-10:45:25:13:12:52 0/1:42:18:11:7:45:40%:63:4.5278E-7:44:27:19:8:46 0/1:47:21:10:11:39:53.85%:79:1.1402E-8:46:18:10:8:39 0/1:45:16:10:6:38:42.11%:56:2.0535E-6:44:22:14:8:39 0/1:45:25:11:14:41:60.98%:98:1.3631E-10:47:16:9:7:42 0/1:50:31:14:17:47:65.96%:99:2.2538E-13:46:16:7:9:50 0/1:45:25:16:9:48:52.08%:93:4.1182E-10:42:23:14:9:49 0/1:40:42:23:19:82:51.22%:99:1.7502E-16:45:40:22:18:85 0/1:43:34:18:16:49:69.39%:99:6.2611E-15:45:15:9:6:50 0/1:44:26:13:13:60:43.33%:93:4.5813E-10:48:34:14:20:61 0/1:45:30:18:12:62:48.39%:99:8.6344E-12:41:32:19:13:64 0/1:46:21:11:10:46:45.65%:76:2.4256E-8:51:25:15:10:48 0/1:44:29:16:13:51:56.86%:99:6.4161E-12:44:22:15:7:55 0/1:42:21:12:9:38:55.26%:80:9.9016E-9:43:17:8:9:39 0/1:44:24:14:10:54:44.44%:86:2.1774E-9:42:30:16:14:54 0/1:43:38:28:10:65:58.46%:99:1.4569E-15:46:27:12:15:65 0/1:45:27:10:17:59:45.76%:98:1.5211E-10:40:32:17:15:59 0/1:42:34:17:17:65:52.31%:99:1.5381E-13:45:31:17:14:68 0/1:48:22:13:9:47:46.81%:80:9.3895E-9:47:25:14:11:48 0/1:46:22:12:10:50:44%:79:1.2104E-8:43:28:18:10:52 0/1:48:30:13:17:61:49.18%:99:7.7752E-12:43:31:17:14:62 0/1:43:43:22:21:78:55.13%:99:3.2729E-17:43:35:21:14:78 0/1:41:34:22:12:70:48.57%:99:2.7419E-13:45:36:17:19:71 0/1:48:44:18:26:98:44.9%:99:1.0541E-16:45:54:28:26:101 0/1:44:35:20:15:75:46.67%:99:1.5567E-13:46:40:23:17:75 0/1:41:55:35:20:94:58.51%:99:2.9411E-22:45:39:19:20:95 0/1:43:40:28:12:75:53.33%:99:6.6743E-16:46:35:17:18:76 0/1:44:35:28:7:75:46.67%:99:1.5567E-13:39:40:22:18:77 0/1:46:20:12:8:40:50%:74:3.8991E-8:43:20:10:10:43 0/1:44:34:11:23:64:53.12%:99:1.3489E-13:43:30:16:14:64 0/1:43:29:16:13:56:51.79%:99:1.3048E-11:42:27:18:9:59 0/1:42:40:24:16:85:47.06%:99:2.0985E-15:43:45:22:23:86 0/1:44:35:19:16:65:53.85%:99:4.9668E-14:41:30:18:12:67 0/1:42:35:13:22:76:46.05%:99:1.7063E-13:42:41:20:21:79 0/1:45:38:22:16:78:48.72%:99:8.7026E-15:41:40:16:24:82 0/1:45:44:25:19:83:53.01%:99:2.1215E-17:45:39:23:16:84 0/1:48:23:13:10:41:56.1%:88:1.5244E-9:43:18:11:7:41 0/0:0:0:0:0:103:0%:99:1E0:42:103:59:44:108 0/1:46:34:17:17:47:72.34%:99:3.1782E-15:45:13:5:8:50 0/1:40:28:11:17:60:46.67%:99:5.88E-11:43:32:18:14:61 0/1:42:31:17:14:63:49.21%:99:3.2811E-12:45:32:18:14:66 0/1:41:59:37:22:108:54.63%:99:2.5491E-23:43:49:27:22:109 0/1:43:47:27:20:86:54.65%:99:1.0476E-18:44:39:23:16:89 0/1:42:33:19:14:58:56.9%:99:1.7621E-13:46:25:14:11:59 0/1:42:49:24:25:97:50.52%:99:4.6917E-19:43:48:30:18:99 0/1:45:33:20:13:63:52.38%:99:3.6448E-13:46:30:20:10:65 0/1:43:39:29:10:71:54.93%:99:1.1875E-15:44:32:22:10:74 0/1:44:32:22:10:62:51.61%:99:9.798E-13:46:30:15:15:63 0/1:44:42:29:13:82:51.22%:99:1.7502E-16:42:40:22:18:83 0/1:45:28:17:11:47:59.57%:99:1.0643E-11:47:19:8:11:49 0/1:45:37:18:19:69:53.62%:99:8.8612E-15:48:32:20:12:72 0/1:45:43:21:22:91:47.25%:99:1.5824E-16:45:48:24:24:94 0/1:46:22:13:9:47:46.81%:80:9.3895E-9:48:25:11:14:47 0/1:47:49:31:18:94:52.13%:99:3.2424E-19:46:45:30:15:98 0/1:49:21:10:11:42:50%:77:1.6451E-8:49:21:13:8:43 0/1:47:22:15:7:40:55%:83:4.1855E-9:44:18:12:6:40 0/1:44:34:21:13:66:51.52%:99:1.7439E-13:46:32:14:18:68 0/1:47:31:19:12:57:54.39%:99:1.5588E-12:47:26:12:14:58 0/1:48:16:5:11:38:42.11%:56:2.0535E-6:45:22:13:9:39 0/1:51:26:18:8:52:50%:96:2.1991E-10:45:26:11:15:53 0/1:44:47:25:22:87:54.02%:99:1.2112E-18:42:40:23:17:89 0/1:42:29:11:18:55:52.73%:99:1.1491E-11:41:26:14:12:55 0/1:44:37:27:10:62:59.68%:99:2.8393E-15:44:25:14:11:62 0/1:46:33:19:14:63:52.38%:99:3.6448E-13:43:30:15:15:64 0/1:46:25:13:12:73:34.25%:86:2.4806E-9:43:48:28:20:75 0/1:43:41:24:17:71:57.75%:99:1.1213E-16:42:30:19:11:71 0/1:42:47:28:19:82:57.32%:99:5.5558E-19:44:35:20:15:84 0/1:43:54:36:18:98:55.1%:99:1.8815E-21:42:44:29:15:100 0/1:44:36:24:12:71:50.7%:99:3.5003E-14:43:35:17:18:71 0/1:46:34:20:14:62:54.84%:99:1.0182E-13:42:28:15:13:64 0/1:41:47:27:20:77:61.04%:99:2.1727E-19:42:30:23:7:79 0/1:41:35:14:21:63:55.56%:99:3.7062E-14:44:28:18:10:64 0/1:42:45:18:27:74:60.81%:99:1.4493E-18:42:29:19:10:76 0/1:47:22:8:14:40:55%:83:4.1855E-9:45:18:12:6:41 0/1:44:30:17:13:61:49.18%:99:7.7752E-12:44:31:20:11:61 0/1:48:26:17:9:56:46.43%:94:3.2889E-10:46:30:9:21:57 0/1:46:44:22:22:70:62.86%:99:2.188E-18:45:26:14:12:71 0/1:46:14:6:8:40:35%:48:1.5388E-5:47:26:15:11:43 0/1:41:50:33:17:94:53.19%:99:1.0497E-19:41:44:22:22:97 0/1:45:26:12:14:53:49.06%:96:2.4512E-10:43:27:13:14:54 0/1:46:55:25:30:98:56.12%:99:5.8301E-22:44:43:26:17:100 0/1:45:16:9:7:41:39.02%:56:2.4696E-6:43:25:16:9:41 0/1:45:29:16:13:50:58%:99:5.4249E-12:44:21:14:7:53 0/1:44:33:19:14:61:54.1%:99:2.783E-13:45:28:12:16:62 0/1:41:30:17:13:51:58.82%:99:1.9336E-12:44:21:14:7:54 0/1:41:27:17:10:56:48.21%:99:1.1473E-10:40:29:16:13:56 0/1:45:28:12:16:46:60.87%:99:8.7676E-12:45:18:10:8:47 0/1:42:29:14:15:56:51.79%:99:1.3048E-11:43:27:19:8:59 0/1:43:22:16:6:45:48.89%:81:7.724E-9:44:23:12:11:48 0/0:0:0:0:0:42:0%:77:1E0:38:42:25:17:44 0/1:44:18:10:8:40:45%:64:3.1919E-7:42:22:13:9:41 0/1:48:23:12:11:42:54.76%:87:1.7689E-9:44:19:13:6:42 0/1:40:32:21:11:63:50.79%:99:1.1052E-12:46:31:12:19:63 0/1:41:24:17:7:41:58.54%:93:4.6506E-10:45:17:9:8:42 0/1:43:31:15:16:58:53.45%:99:1.7922E-12:45:27:16:11:59 0/1:43:29:14:15:57:50.88%:99:1.4722E-11:41:28:16:12:59 0/1:44:30:14:16:62:48.39%:99:8.6344E-12:42:32:13:19:63 0/1:40:29:15:14:47:61.7%:99:3.0639E-12:39:18:11:7:48 0/1:35:21:10:11:40:52.5%:78:1.2997E-8:40:19:10:9:43 0/1:45:34:20:14:70:48.57%:99:2.7419E-13:44:36:22:14:70 0/1:43:29:10:19:61:47.54%:99:2.2597E-11:41:32:19:13:63 0/1:39:52:25:27:86:60.47%:99:2.5717E-21:43:34:17:17:86 0/1:39:32:16:16:55:58.18%:99:3.5017E-13:37:23:16:7:56 0/1:46:32:18:14:64:50%:99:1.2401E-12:44:32:22:10:67 0/1:42:17:8:9:38:44.74%:61:7.5297E-7:36:21:13:8:39 0/1:43:54:31:23:99:54.55%:99:2.1853E-21:43:45:27:18:99 0/1:43:39:24:15:86:45.35%:99:6.5271E-15:41:47:26:21:88 0/1:41:33:17:16:68:48.53%:99:6.4956E-13:43:35:22:13:71 0/1:44:24:10:14:39:61.54%:94:3.1797E-10:41:15:10:5:40 0/1:41:53:31:22:90:58.89%:99:1.6187E-21:40:37:21:16:93 0/1:43:34:16:18:60:56.67%:99:7.4725E-14:39:26:16:10:68 0/1:41:46:24:22:81:56.79%:99:1.548E-18:39:35:19:16:88 0/1:38:44:27:17:80:55%:99:1.3846E-17:38:36:19:17:82 0/1:39:34:16:18:66:51.52%:99:1.7439E-13:41:32:20:12:69 0/1:46:32:18:14:60:53.33%:99:7.5673E-13:43:28:14:14:62 0/1:44:27:14:13:67:40.3%:95:2.751E-10:42:40:16:24:72 0/1:37:27:15:12:64:42.19%:96:2.2534E-10:42:37:24:13:69 0/1:38:38:25:13:72:52.78%:99:4.2836E-15:38:34:16:18:75 0/1:39:45:30:15:77:58.44%:99:2.5784E-18:38:32:22:10:80 0/1:42:37:25:12:75:49.33%:99:1.8524E-14:38:38:27:11:77 0/1:43:25:14:11:59:42.37%:89:1.16E-9:37:34:24:10:61 0/1:43:26:13:13:60:43.33%:93:4.5813E-10:39:34:19:15:64 0/1:37:53:29:24:103:51.46%:99:1.1666E-20:38:50:26:24:105 0/1:39:35:23:12:75:46.67%:99:1.5567E-13:41:40:26:14:77 0/1:42:43:33:10:79:54.43%:99:3.7958E-17:39:36:15:21:81 0/1:41:36:18:18:73:49.32%:99:4.39E-14:40:37:23:14:75 0/1:44:37:20:17:56:66.07%:99:7.3439E-16:43:19:11:8:57 0/1:41:23:15:8:44:52.27%:86:2.3136E-9:43:21:12:9:44 0/1:40:31:17:14:67:46.27%:99:4.8717E-12:39:36:21:15:68 0/1:42:38:19:19:65:58.46%:99:1.4569E-15:42:27:16:11:66 0/1:40:27:15:12:58:46.55%:98:1.3907E-10:42:31:19:12:59 0/1:42:31:18:13:50:62%:99:4.5844E-13:41:19:12:7:52 0/1:43:37:19:18:77:48.05%:99:2.2863E-14:46:40:20:20:81 0/1:39:45:25:20:87:51.72%:99:1.1614E-17:43:42:23:19:87 0/1:41:55:31:24:106:51.89%:99:1.8312E-21:41:51:26:25:108 0/1:42:39:18:21:79:49.37%:99:3.2981E-15:39:40:24:16:81 MTB_anc 1481609 . T TC . PASS AC=267;AF=0.890;AN=300;ANN=TC|frameshift_variant|HIGH|Rv1319c_Rv1319c|gene1350|transcript|Transcript_gene1350|Coding|1/1|c.892dupG|p.Asp298fs|892/1608|892/1608|298/535||,TC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1481609_1481610insC||||||,TC|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1481609_1481610insC||||||;LOF=(Rv1319c_Rv1319c|gene1350|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:62:30:32:64:93.94%:99:2.4296E-33:39:4:0:4:66 1/1:50:28:16:12:31:90.32%:99:1.2857E-14:34:3:2:1:31 0/1:43:65:31:34:73:89.04%:99:5.4698E-33:44:8:3:5:73 0/1:43:33:18:15:39:82.5%:99:2.9926E-16:38:6:0:6:39 0/1:42:41:25:16:45:89.13%:99:5.7183E-21:33:5:3:2:46 1/1:42:46:26:20:49:93.88%:99:8.6743E-25:44:3:1:2:49 1/1:44:54:22:32:57:91.53%:99:3.1304E-28:44:5:1:4:59 1/1:41:32:11:21:34:94.12%:99:2.2142E-17:32:2:2:0:34 0/1:47:43:21:22:48:87.76%:99:1.1378E-21:52:6:3:3:49 0/1:40:34:17:17:36:87.18%:99:3.9902E-17:39:5:5:0:39 0/1:42:43:19:24:48:87.76%:99:1.1378E-21:46:6:4:2:49 1/1:40:64:35:29:63:98.46%:99:6.9424E-37:33:1:0:1:65 0/1:42:27:12:15:32:81.82%:99:4.5192E-13:46:6:3:3:33 1/1:39:57:35:22:55:96.61%:99:7.5133E-32:33:2:2:0:59 0/1:45:31:17:14:33:88.57%:99:7.3316E-16:33:4:3:1:35 0/1:44:44:24:20:48:89.8%:99:1.2413E-22:33:5:2:3:49 0/1:40:32:16:16:36:86.49%:99:4.8717E-16:40:5:3:2:37 0/1:39:29:16:13:33:85.29%:99:2.0235E-14:35:5:2:3:34 0/1:46:26:12:14:30:86.67%:99:3.9214E-13:41:4:2:2:31 0/1:45:34:18:16:39:85%:99:8.7127E-17:34:6:3:3:41 1/1:40:36:23:13:39:90%:99:1.2627E-18:39:4:1:3:40 1/1:41:60:32:28:63:92.31%:99:1.2731E-31:39:5:1:4:65 1/1:43:36:18:18:39:92.31%:99:4.2179E-19:51:3:3:0:40 1/1:40:52:28:24:53:92.86%:99:1.2485E-27:32:4:2:2:57 1/1:40:60:31:29:62:92.31%:99:1.2731E-31:36:5:3:2:65 0/1:43:39:18:21:44:88.64%:99:7.2647E-20:39:5:3:2:44 1/1:43:35:18:17:34:92.11%:99:1.5466E-18:41:3:2:1:38 1/1:43:34:18:16:36:91.89%:99:5.6582E-18:43:3:0:3:37 1/1:43:43:16:27:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:50:24:26:49:94.34%:99:4.4193E-27:42:3:1:2:53 1/1:41:49:28:21:53:92.45%:99:6.2975E-26:41:4:3:1:53 0/1:41:55:25:30:62:87.3%:99:7.0943E-28:35:7:6:1:63 1/1:48:47:23:24:49:94%:99:2.3219E-25:33:3:1:2:50 1/1:40:47:22:25:49:92.16%:99:8.5347E-25:41:4:2:2:51 0/1:42:34:19:15:36:89.47%:99:1.6239E-17:33:4:3:1:38 1/1:42:46:27:19:49:93.88%:99:8.6743E-25:43:3:0:3:49 1/1:41:49:22:27:52:92.45%:99:6.2975E-26:40:4:1:3:53 0/1:41:67:33:34:74:88.16%:99:1.1162E-33:38:9:7:2:76 1/1:43:55:23:32:56:98.21%:99:1.4593E-31:34:1:1:0:56 1/1:42:65:31:34:68:95.59%:99:1.5658E-36:35:2:1:1:68 1/1:42:62:24:38:61:98.41%:99:1.0605E-35:38:1:0:1:63 1/1:44:53:28:25:55:94.64%:99:8.323E-29:43:3:2:1:56 1/1:42:32:20:12:32:96.97%:99:4.7095E-18:34:1:0:1:33 0/1:45:33:17:16:37:89.19%:99:5.7997E-17:36:4:2:2:37 1/1:38:56:31:25:57:94.92%:99:1.5528E-30:42:3:1:2:59 1/1:41:70:40:30:76:92.11%:99:2.5898E-37:38:5:1:4:76 0/1:41:42:22:20:47:89.36%:99:1.5987E-21:39:5:3:2:47 1/1:42:53:30:23:57:91.38%:99:1.1445E-27:40:5:2:3:59 1/1:41:64:36:28:68:92.75%:99:6.8188E-34:38:5:0:5:70 1/1:41:59:32:27:60:95.16%:99:2.8722E-32:34:3:2:1:62 0/1:44:44:25:19:53:83.02%:99:3.2342E-21:46:9:4:5:53 1/1:38:62:28:34:58:98.41%:99:1.0605E-35:35:1:0:1:63 1/1:40:26:16:10:27:96.3%:99:1.4382E-14:34:1:0:1:28 1/1:41:49:26:23:48:96.08%:99:3.4484E-27:33:2:0:2:51 1/1:40:40:21:19:43:90.91%:99:7.413E-21:31:4:4:0:44 1/1:37:67:34:33:71:93.06%:99:1.3348E-35:40:5:3:2:72 0/1:40:54:29:25:59:88.52%:99:2.5293E-27:33:7:2:5:61 1/1:44:37:21:16:37:94.87%:99:3.0128E-20:30:2:0:2:39 1/1:42:61:33:28:66:92.42%:99:3.45E-32:38:5:1:4:66 1/1:45:54:28:26:57:94.74%:99:4.2321E-30:34:2:1:1:57 1/1:40:52:23:29:52:98.11%:99:8.609E-30:35:1:0:1:53 1/1:41:55:24:31:59:93.22%:99:2.4456E-29:33:4:0:4:59 1/1:40:46:19:27:49:92%:99:3.1346E-24:40:4:2:2:52 1/1:43:36:16:20:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:55:26:29:58:93.22%:99:2.4456E-29:39:4:1:3:59 1/1:43:60:27:33:62:93.75%:99:3.4002E-32:34:4:4:0:64 1/1:43:43:22:21:44:93.48%:99:1.0412E-23:46:2:0:2:46 1/1:42:66:29:37:68:92.96%:99:4.9578E-35:39:5:3:2:71 1/1:44:30:14:16:33:90.91%:99:9.89E-16:44:3:1:2:33 0/1:43:29:17:12:33:87.88%:99:9.1482E-15:42:4:2:2:33 1/1:47:49:27:22:52:92.45%:99:6.2975E-26:40:4:2:2:53 1/1:45:35:17:18:35:94.59%:99:4.2437E-19:35:2:1:1:37 1/1:44:33:13:20:36:91.67%:99:2.0653E-17:36:3:1:2:36 1/1:46:36:21:15:36:97.3%:99:2.1762E-20:60:1:1:0:37 0/1:39:54:33:21:59:87.1%:99:6.2075E-27:36:8:3:5:62 1/1:46:43:18:25:46:93.48%:99:4.485E-23:43:3:1:2:46 1/1:38:39:18:21:40:95.12%:99:2.1258E-21:31:2:2:0:43 0/1:44:40:19:21:45:86.96%:99:4.9559E-20:37:6:3:3:46 1/1:42:47:25:22:49:95.92%:99:5.0044E-26:45:2:1:1:49 1/1:42:40:16:24:44:90.91%:99:7.413E-21:35:4:2:2:44 0/1:38:40:24:16:44:86.96%:99:7.413E-21:47:4:2:2:46 1/1:40:74:41:33:77:94.87%:99:3.0022E-40:34:4:2:2:78 1/1:45:37:17:20:38:97.37%:99:5.6582E-21:38:1:1:0:39 1/1:47:32:14:18:33:96.97%:99:4.7095E-18:33:1:0:1:34 1/1:37:51:19:32:51:92.73%:99:4.6193E-27:34:4:2:2:55 1/1:36:42:18:24:41:91.3%:99:5.6062E-22:33:4:2:2:46 0/1:44:37:16:21:42:88.1%:99:9.1365E-19:37:5:4:1:42 0/1:49:23:10:13:27:85.19%:99:7.3681E-12:33:3:1:2:28 1/1:42:37:19:18:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:34:14:20:37:91.89%:99:5.6582E-18:43:3:1:2:37 0/1:41:48:22:26:51:88.89%:99:2.014E-24:40:6:4:2:54 1/1:44:30:17:13:32:93.75%:99:3.0612E-16:32:2:1:1:32 1/1:36:63:40:23:63:95.45%:99:1.3883E-34:33:3:2:1:66 1/1:40:48:27:21:51:94.12%:99:1.3143E-26:35:2:1:1:51 1/1:40:62:35:27:65:93.94%:99:2.4296E-33:34:4:2:2:67 0/1:43:37:17:20:45:82.22%:99:8.5365E-18:34:8:2:6:45 1/1:39:38:20:18:39:92.68%:99:8.0088E-21:36:2:1:1:41 1/1:41:48:24:24:49:92.31%:99:2.3201E-25:37:4:2:2:52 1/1:39:38:14:24:36:97.44%:99:1.4697E-21:35:1:0:1:39 1/1:41:45:24:21:49:91.84%:99:1.1493E-23:34:4:1:3:49 1/1:43:46:31:15:48:93.88%:99:8.6743E-25:43:3:1:2:49 1/1:39:46:23:23:45:97.87%:99:2.9526E-26:34:1:1:0:47 1/1:41:47:22:25:48:95.92%:99:5.0044E-26:31:2:2:0:49 1/1:39:50:24:26:49:98.04%:99:1.3013E-28:33:1:1:0:51 1/1:33:26:14:12:23:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:40:48:28:20:48:96%:99:1.3143E-26:33:2:1:1:50 1/1:42:32:14:18:34:91.43%:99:7.5196E-17:33:3:2:1:35 1/1:41:43:25:18:44:95.56%:99:1.0412E-23:35:2:2:0:45 1/1:39:51:25:26:49:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:32:22:10:34:94.12%:99:2.2142E-17:35:2:2:0:34 1/1:41:45:21:24:45:97.83%:99:1.1441E-25:39:1:0:1:46 1/1:40:46:24:22:47:93.88%:99:8.6743E-25:34:3:2:1:49 0/1:36:28:12:16:28:87.5%:99:3.2142E-14:33:4:1:3:32 1/1:38:53:28:25:54:94.64%:99:8.323E-29:42:3:1:2:56 1/1:39:41:18:23:43:95.35%:99:1.4915E-22:32:2:1:1:43 1/1:36:61:29:32:59:95.31%:99:2.0001E-33:33:3:2:1:64 1/1:36:53:29:24:48:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:57:31:26:58:98.28%:99:9.6072E-33:30:1:0:1:58 1/1:37:31:17:14:32:91.18%:99:2.7308E-16:32:3:1:2:34 1/1:40:59:36:23:65:90.77%:99:1.5065E-30:33:6:4:2:65 1/1:40:67:33:34:72:91.78%:99:4.727E-35:33:6:1:5:73 1/1:39:43:23:20:45:93.48%:99:4.485E-23:42:3:1:2:46 1/1:38:35:19:16:32:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:59:26:33:59:96.72%:99:5.0953E-33:32:2:1:1:62 1/1:35:47:25:22:48:92.16%:99:8.5347E-25:34:4:1:3:51 1/1:37:72:35:37:69:97.3%:99:1.2199E-40:37:2:2:0:76 1/1:35:57:31:26:54:96.61%:99:7.5133E-32:35:2:1:1:61 1/1:37:60:31:29:58:98.36%:99:1.6176E-34:38:1:0:1:61 1/1:38:54:28:26:53:98.18%:99:5.6837E-31:33:1:0:1:55 1/1:38:54:28:26:55:96.43%:99:4.2321E-30:33:2:1:1:56 1/1:37:57:37:20:54:96.61%:99:7.5133E-32:32:2:1:1:60 1/1:40:59:34:25:58:96.72%:99:5.0953E-33:33:2:0:2:61 1/1:34:38:22:16:37:95%:99:8.0088E-21:35:2:1:1:40 1/1:37:51:22:29:51:92.73%:99:4.6193E-27:33:4:1:3:56 1/1:35:43:25:18:40:95.56%:99:1.0412E-23:34:2:1:1:46 1/1:39:48:30:18:51:92.31%:99:2.3201E-25:34:4:2:2:52 1/1:38:66:30:36:71:92.96%:99:4.9578E-35:35:5:2:3:71 1/1:39:51:24:27:55:91.07%:99:1.5231E-26:35:5:0:5:56 0/1:39:51:26:25:58:86.44%:99:4.3874E-26:42:6:1:5:59 0/1:40:50:27:23:58:83.33%:99:4.106E-24:35:10:3:7:60 1/1:39:45:27:18:47:91.84%:99:1.1493E-23:33:4:2:2:49 1/1:40:40:19:21:41:95.24%:99:5.6346E-22:33:2:2:0:42 1/1:37:40:21:19:40:93.02%:99:2.287E-21:42:3:2:1:43 1/1:41:57:28:29:60:95%:99:4.1102E-31:35:3:1:2:60 1/1:40:49:23:26:50:92.45%:99:1.6572E-26:33:3:0:3:53 1/1:43:31:17:14:30:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:39:45:25:20:46:91.84%:99:1.1493E-23:40:4:1:3:49 0/1:39:57:33:24:62:89.06%:99:5.5525E-29:34:7:3:4:64 1/1:39:63:29:34:67:91.3%:99:8.5235E-33:33:6:0:6:69 1/1:40:54:30:24:57:93.1%:99:9.0836E-29:41:4:1:3:58 MTB_anc 1483215 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv1320c_Rv1320c|gene1351|transcript|Transcript_gene1351|Coding|1/1|c.1003G>A|p.Gly335Ser|1003/1704|1003/1704|335/567||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1483215C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1483215C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:18:0%:32:1E0:53:18:11:7:18 0/0:0:0:0:0:58:0%:99:1E0:50:58:27:31:58 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:20 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:35 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:35:0%:67:1E0:48:35:13:22:35 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:36 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:41 0/0:0:0:0:0:22:0%:40:1E0:50:22:8:14:22 0/0:0:0:0:0:62:0%:99:1E0:46:62:27:35:62 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:40 0/0:45:1:1:0:28:3.57%:41:5E-1:46:27:18:9:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:17:0%:33:1E0:43:17:13:4:17 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:34 0/0:0:0:0:0:61:0%:99:1E0:44:61:30:31:63 0/0:0:0:0:0:37:0%:70:1E0:50:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:40 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:30:0%:55:1E0:50:30:20:10:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:45:0%:85:1E0:44:45:15:30:46 0/0:0:0:0:0:25:0%:48:1E0:51:25:11:14:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:42 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:54:0%:99:1E0:46:54:30:24:54 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:47 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:42 0/0:0:0:0:0:50:0%:92:1E0:41:50:27:23:50 0/0:0:0:0:0:53:0%:99:1E0:47:53:26:27:53 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:48:0%:89:1E0:42:48:30:18:50 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:44 0/0:0:0:0:0:44:0%:81:1E0:50:44:27:17:45 0/0:0:0:0:0:25:0%:48:1E0:50:25:18:7:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:31 0/0:0:0:0:0:26:0%:47:1E0:51:26:18:8:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:60:1:1:0:60:1.67%:98:5E-1:44:59:26:33:60 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:0:0:0:0:52:0%:96:1E0:43:52:29:23:53 0/0:0:0:0:0:51:0%:97:1E0:49:51:26:25:51 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:44 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:46 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:30 0/0:0:0:0:0:33:0%:63:1E0:51:33:20:13:33 0/0:0:0:0:0:62:0%:99:1E0:48:62:29:33:63 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:43:0%:82:1E0:48:43:26:17:43 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:21 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:21:10:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:32 0/0:0:0:0:0:15:0%:29:1E0:50:15:8:7:15 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 0/0:0:0:0:0:43:0%:82:1E0:41:43:27:16:43 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:33 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:33 0/0:0:0:0:0:64:0%:99:1E0:45:64:32:32:65 0/0:0:0:0:0:32:0%:59:1E0:45:32:22:10:32 0/0:0:0:0:0:39:0%:74:1E0:50:39:23:16:39 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:23 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:41:0%:78:1E0:48:41:22:19:41 0/0:0:0:0:0:22:0%:40:1E0:50:22:16:6:22 0/0:0:0:0:0:62:0%:99:1E0:43:62:32:30:62 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:24 0/0:0:0:0:0:62:0%:99:1E0:47:62:29:33:63 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:18 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:9:34:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:32 1/1:40:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:12:0%:21:1E0:45:12:6:6:13 0/0:0:0:0:0:29:0%:55:1E0:47:29:8:21:30 0/0:0:0:0:0:20:0%:36:1E0:49:20:8:12:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:49 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:29 0/0:0:0:0:0:39:0%:74:1E0:48:39:17:22:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:34 0/0:0:0:0:0:65:0%:99:1E0:43:65:28:37:66 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:52 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:57:0%:99:1E0:43:57:32:25:61 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:34 0/0:0:0:0:0:50:0%:92:1E0:43:50:26:24:56 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:47 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:44 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:44 0/0:35:1:1:0:39:2.56%:62:5E-1:43:38:16:22:40 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:45 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:57:0%:99:1E0:40:57:31:26:58 0/0:32:1:1:0:47:2.13%:77:5E-1:45:46:22:24:48 0/0:38:1:0:1:42:2.38%:66:5E-1:43:41:16:25:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:40 0/0:60:1:1:0:48:2.08%:76:5E-1:42:47:29:18:48 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:40 0/0:0:0:0:0:15:0%:29:1E0:41:15:9:6:16 0/0:34:1:0:1:40:2.5%:62:5E-1:44:39:23:16:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:39 MTB_anc 1488645 . G C . PASS AC=252;AF=1.00;AN=252;ANN=C|missense_variant|MODERATE|PE_PGRS24_Rv1325c|gene1357|transcript|Transcript_gene1357|Coding|1/1|c.1321C>G|p.Arg441Gly|1321/1812|1321/1812|441/603||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1488645G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1488645G>C||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:6:3:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:15:13:2:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:37:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:11:1:13:100%:64:3.698E-7:0:0:0:0:14 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:18:13:5:19:94.74%:92:5.6585E-10:38:1:1:0:20 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 MTB_anc 1488793 . G C . PASS AC=270;AF=1.00;AN=270;ANN=C|synonymous_variant|LOW|PE_PGRS24_Rv1325c|gene1357|transcript|Transcript_gene1357|Coding|1/1|c.1173C>G|p.Gly391Gly|1173/1812|1173/1812|391/603||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1488793G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1488793G>C||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:4:6:11:90.91%:52:5.4125E-6:0:0:0:0:13 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:13:8:5:15:92.86%:64:3.7391E-7:38:1:1:0:15 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:9:7:2:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:20:12:8:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:27:20:7:28:100%:99:5.1363E-16:0:0:0:0:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:33:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:33:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:34:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:9:2:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 MTB_anc 1490883 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|glgB_Rv1326c|gene1358|transcript|Transcript_gene1358|Coding|1/1|c.1430A>C|p.Asn477Thr|1430/2196|1430/2196|477/731||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1490883T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1490883T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:52:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:50:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:66:34:32:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:39:22:17:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:15:6:9:16:93.75%:75:2.8282E-8:39:1:1:0:16 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:61:25:36:61:100%:99:2.609E-36:0:0:0:0:61 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:56:38:18:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:61:29:32:62:98.39%:99:4.1425E-35:60:1:1:0:63 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:47 1/1:43:39:30:9:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 1490905 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|glgB_Rv1326c|gene1358|transcript|Transcript_gene1358|Coding|1/1|c.1408C>T|p.Pro470Ser|1408/2196|1408/2196|470/731||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1490905G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1490905G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:51:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:63:27:36:63:100%:99:1.657E-37:0:0:0:0:63 1/1:51:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:55:37:18:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 1490911 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|glgB_Rv1326c|gene1358|transcript|Transcript_gene1358|Coding|1/1|c.1402T>C|p.Ser468Pro|1402/2196|1402/2196|468/731||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1490911A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1490911A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:52:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:48:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:51:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:21:12:9:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:19:11:8:20:95%:99:2.8292E-11:0:0:0:0:21 1/1:52:30:16:14:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:41:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:63:27:36:63:100%:99:1.657E-37:0:0:0:0:63 1/1:49:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:35:12:23:36:97.22%:99:8.3613E-20:37:1:0:1:39 1/1:41:54:36:18:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 1492194 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|glgB_Rv1326c|gene1358|transcript|Transcript_gene1358|Coding|1/1|c.119G>A|p.Gly40Asp|119/2196|119/2196|40/731||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1492194C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1492194C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:61:30:31:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:49:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:37:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:35:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 MTB_anc 1494245 . C G . PASS AC=4;AF=0.013;AN=300;ANN=G|missense_variant|MODERATE|glgE_Rv1327c|gene1359|transcript|Transcript_gene1359|Coding|1/1|c.181G>C|p.Val61Leu|181/2106|181/2106|61/701||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1494245C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1494245C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:16:0%:29:1E0:53:16:9:7:16 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:10:24:34 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:41 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:49:1:0:1:34:2.94%:51:5E-1:41:33:21:12:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:21:0%:40:1E0:47:21:4:17:21 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:28 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:33:0%:63:1E0:47:33:12:21:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:41 0/0:0:0:0:0:23:0%:44:1E0:50:23:14:9:23 0/0:0:0:0:0:34:0%:62:1E0:48:34:12:22:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:24:0%:44:1E0:46:24:16:8:24 0/0:0:0:0:0:35:0%:67:1E0:41:35:24:11:36 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:53:0%:99:1E0:46:53:27:26:53 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:49 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:30:0%:55:1E0:50:30:13:17:30 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:19 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:38 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:22:0%:40:1E0:42:22:17:5:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:40:0%:74:1E0:39:40:24:16:40 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:26:12:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:21:7:29 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:46 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:53:0%:99:1E0:45:53:30:23:53 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:24 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:42 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:18:0%:32:1E0:49:18:10:8:18 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:23:11:35 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:27 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:50:0%:92:1E0:42:50:22:28:50 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:15:0%:29:1E0:46:15:9:6:15 0/0:0:0:0:0:30:0%:55:1E0:47:30:20:10:31 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:37 0/0:0:0:0:0:26:0%:47:1E0:47:26:19:7:26 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:47 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:20:0%:36:1E0:42:20:7:13:21 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:42 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:14:24:38 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:32 0/0:0:0:0:0:40:0%:74:1E0:40:40:25:15:41 0/0:0:0:0:0:43:0%:82:1E0:38:43:21:22:43 0/0:0:0:0:0:30:0%:55:1E0:36:30:17:13:31 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:46 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:36 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:27 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:42 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:34 0/0:0:0:0:0:39:0%:74:1E0:38:39:22:17:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:49:0%:93:1E0:40:49:26:23:49 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:42 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:42 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:42 0/0:0:0:0:0:59:0%:99:1E0:42:59:31:28:59 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 MTB_anc 1495326 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|glgP_Rv1328|gene1360|transcript|Transcript_gene1360|Coding|1/1|c.763A>G|p.Lys255Glu|763/2592|763/2592|255/863||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1495326A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1495326A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:19:17:37:97.3%:99:2.1762E-20:39:1:1:0:38 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:23:16:7:25:92%:99:2.7767E-12:48:2:1:1:25 1/1:45:28:17:11:29:96.55%:99:9.9776E-16:38:1:0:1:29 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:51:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:67:37:30:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:45:23:22:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:19:15:35:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:18:10:8:19:94.74%:92:5.6585E-10:60:1:1:0:20 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:29:13:16:30:96.67%:99:2.6212E-16:39:1:1:0:30 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:73:44:29:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:41:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:49:30:19:49:100%:99:3.925E-29:0:0:0:0:52 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:37:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:35:16:19:36:97.22%:99:8.3613E-20:38:1:0:1:36 1/1:43:61:36:25:61:100%:99:2.609E-36:0:0:0:0:62 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 1496964 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|glgP_Rv1328|gene1360|transcript|Transcript_gene1360|Coding|1/1|c.2401T>G|p.Ser801Ala|2401/2592|2401/2592|801/863||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1496964T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1496964T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:44:32:12:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:58:41:17:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:53:38:15:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:37:30:7:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:48:32:16:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:47:32:15:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:18:18:37:97.3%:99:2.1762E-20:39:1:1:0:37 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:51:36:15:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:17:14:3:18:94.44%:86:2.0936E-9:50:1:0:1:18 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:50:35:15:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:48:33:15:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:21:15:6:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:42:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:29:16:13:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:49:35:14:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:45:35:28:7:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:35:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:54:37:17:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:34:27:7:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:24:14:39:97.44%:99:1.4697E-21:38:1:1:0:39 1/1:39:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 1497601 . A C . PASS AC=18;AF=0.060;AN=300;ANN=C|missense_variant|MODERATE|dinG_Rv1329c|gene1361|transcript|Transcript_gene1361|Coding|1/1|c.1589T>G|p.Phe530Cys|1589/1995|1589/1995|530/664||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1497601A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1497601A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:37:32:10:22:37 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:15 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:50 0/0:0:0:0:0:9:0%:18:1E0:43:9:3:6:11 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:31 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:16 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:33 0/0:0:0:0:0:27:0%:52:1E0:37:27:10:17:32 0/0:0:0:0:0:12:0%:21:1E0:42:12:6:6:19 0/0:0:0:0:0:14:0%:25:1E0:40:14:3:11:22 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:34 0/0:0:0:0:0:8:0%:14:1E0:46:8:6:2:13 0/0:0:0:0:0:39:0%:74:1E0:37:39:17:22:46 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:19 0/0:0:0:0:0:24:0%:44:1E0:38:24:7:17:29 0/0:0:0:0:0:16:0%:29:1E0:42:16:3:13:18 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:20 0/0:0:0:0:0:13:0%:25:1E0:39:13:3:10:15 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:25 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:22 0/0:0:0:0:0:31:0%:59:1E0:37:31:12:19:36 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:11:15:29 0/0:0:0:0:0:29:0%:55:1E0:36:29:13:16:40 0/0:0:0:0:0:20:0%:36:1E0:42:20:7:13:25 0/0:0:0:0:0:15:0%:29:1E0:41:15:4:11:22 1/1:37:11:4:7:12:91.67%:53:4.8074E-6:36:1:1:0:14 0/0:0:0:0:0:19:0%:37:1E0:34:19:10:9:21 0/0:39:1:0:1:15:6.67%:21:5E-1:36:14:6:8:20 0/0:0:0:0:0:37:0%:70:1E0:39:37:14:23:45 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:11:23:42 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:21 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:26 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:29 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:9:31:48 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:37 0/0:0:0:0:0:34:0%:62:1E0:38:34:12:22:40 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:34 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:36 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:21 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:28 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:32 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:22 0/0:0:0:0:0:29:0%:55:1E0:37:29:8:21:40 0/0:0:0:0:0:33:0%:63:1E0:37:33:13:20:43 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:28 0/0:0:0:0:0:12:0%:21:1E0:39:12:6:6:16 0/0:0:0:0:0:26:0%:47:1E0:38:26:6:20:33 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:19 0/0:0:0:0:0:28:0%:51:1E0:35:28:12:16:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:32 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:41 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:37 0/0:0:0:0:0:23:0%:44:1E0:36:23:10:13:30 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:26 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:35 0/0:24:1:1:0:16:6.25%:21:5E-1:35:15:3:12:22 0/0:0:0:0:0:17:0%:33:1E0:39:17:4:13:22 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:43 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:17 0/0:0:0:0:0:22:0%:40:1E0:38:22:8:14:34 0/0:0:0:0:0:12:0%:21:1E0:43:12:3:9:15 0/0:0:0:0:0:18:0%:32:1E0:44:18:5:13:24 0/0:0:0:0:0:27:0%:52:1E0:37:27:9:18:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:23 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:16 1/1:40:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:28 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:37 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:29 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:28 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:32 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:38 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:29 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:47 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:33 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:26 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:26 0/0:0:0:0:0:26:0%:47:1E0:37:26:6:20:34 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:27 0/0:0:0:0:0:9:0%:18:1E0:42:9:4:5:11 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:18 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:30 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:23 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:39 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:17 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:34 0/0:0:0:0:0:19:0%:37:1E0:35:19:9:10:21 0/0:0:0:0:0:13:0%:25:1E0:36:13:3:10:18 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:27 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:22 0/0:0:0:0:0:24:0%:44:1E0:35:24:10:14:26 0/0:0:0:0:0:29:0%:55:1E0:38:29:8:21:36 0/0:0:0:0:0:16:0%:29:1E0:35:16:5:11:19 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:16 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:27 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:27 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:33 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:33 0/0:0:0:0:0:19:0%:37:1E0:35:19:7:12:25 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:25 0/0:0:0:0:0:19:0%:37:1E0:37:19:1:18:25 0/0:0:0:0:0:24:0%:44:1E0:36:24:9:15:31 0/0:0:0:0:0:18:0%:32:1E0:39:18:3:15:26 0/0:0:0:0:0:24:0%:44:1E0:37:24:6:18:33 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:22 0/0:0:0:0:0:31:0%:59:1E0:36:31:8:23:36 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:29 0/0:0:0:0:0:45:0%:85:1E0:40:45:14:31:49 0/0:0:0:0:0:36:0%:66:1E0:37:36:16:20:47 0/0:0:0:0:0:21:0%:40:1E0:35:21:11:10:23 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:16 0/0:0:0:0:0:33:0%:63:1E0:36:33:7:26:39 0/0:0:0:0:0:23:0%:44:1E0:37:23:5:18:24 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:31 0/0:0:0:0:0:19:0%:37:1E0:37:19:3:16:22 0/0:0:0:0:0:22:0%:40:1E0:38:22:5:17:32 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:24 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:31 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:27 0/0:0:0:0:0:17:0%:33:1E0:35:17:6:11:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:25 0/0:0:0:0:0:29:0%:55:1E0:36:29:9:20:34 0/0:0:0:0:0:12:0%:21:1E0:37:12:1:11:16 0/0:0:0:0:0:25:0%:48:1E0:36:25:7:18:31 0/0:0:0:0:0:38:0%:70:1E0:36:38:9:29:49 0/0:0:0:0:0:25:0%:48:1E0:38:25:5:20:30 0/0:0:0:0:0:28:0%:51:1E0:37:28:4:24:36 1/1:37:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:42 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:35 0/0:0:0:0:0:18:0%:32:1E0:34:18:7:11:21 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:33 0/0:0:0:0:0:20:0%:36:1E0:35:20:5:15:23 0/0:0:0:0:0:13:0%:25:1E0:41:13:4:9:15 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:43 0/0:0:0:0:0:26:0%:47:1E0:40:26:6:20:38 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:23 MTB_anc 1501955 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|synonymous_variant|LOW|Rv1333_Rv1333|gene1365|transcript|Transcript_gene1365|Coding|1/1|c.357C>T|p.Val119Val|357/1035|357/1035|119/344||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1501955C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1501955C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:47 0/0:0:0:0:0:20:0%:36:1E0:50:20:12:8:20 0/0:0:0:0:0:60:0%:99:1E0:43:60:31:29:60 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:60:1:0:1:20:5%:27:5E-1:43:19:5:14:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:13:0%:25:1E0:45:13:7:6:13 0/0:50:1:1:0:43:2.33%:70:5E-1:43:42:26:16:43 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:24 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:19 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:53 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:49 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:60:1:0:1:20:5%:27:5E-1:41:19:10:9:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 0/0:60:1:0:1:27:3.7%:41:5E-1:45:26:15:11:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:46 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:47 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:51:0%:97:1E0:49:51:27:24:51 0/0:37:1:1:0:33:3.03%:52:5E-1:45:32:18:14:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:43 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:47 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:41 0/0:0:0:0:0:25:0%:48:1E0:43:25:20:5:25 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:59:0%:99:1E0:44:59:31:28:59 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:54:0%:99:1E0:44:54:26:28:55 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:49 0/0:0:0:0:0:37:0%:70:1E0:49:37:16:21:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:50:0%:92:1E0:47:50:28:22:50 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:19 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:16:0%:29:1E0:48:16:6:10:16 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:24 0/0:0:0:0:0:57:0%:99:1E0:41:57:32:25:58 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:27:13:41 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:38:1:0:1:31:3.23%:48:5E-1:50:30:14:16:31 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:46:0%:85:1E0:38:46:25:21:47 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:23 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:38:1:0:1:28:3.57%:41:5E-1:42:27:17:10:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:15:0%:29:1E0:46:15:9:6:16 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:19 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:29:0%:55:1E0:36:29:13:16:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:41 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:21:9:30 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:21 0/0:0:0:0:0:45:0%:85:1E0:38:45:24:21:45 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:12:29:43 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:31 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:40 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:7:17:25 0/0:33:1:0:1:32:3.12%:48:5E-1:41:31:18:13:32 0/0:0:0:0:0:51:0%:97:1E0:39:51:25:26:52 0/0:26:1:1:0:47:2.13%:77:5E-1:42:46:22:24:47 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:47 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:23 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:42 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:13:0%:25:1E0:51:13:5:8:13 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:33 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 MTB_anc 1502256 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1333_Rv1333|gene1365|transcript|Transcript_gene1365|Coding|1/1|c.658T>G|p.Leu220Val|658/1035|658/1035|220/344||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1502256T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1502256T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:48:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:49:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:47:28:19:48:97.92%:99:7.6145E-27:38:1:0:1:49 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:12:8:21:95.24%:99:4.0873E-11:36:1:0:1:21 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:60:36:24:61:98.36%:99:1.035E-35:0:0:0:0:61 1/1:46:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:47:29:18:49:95.92%:99:5.0044E-26:31:2:0:2:49 1/1:49:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:40:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:25:15:41:97.56%:99:9.8874E-23:60:1:0:1:42 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 MTB_anc 1503915 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|synonymous_variant|LOW|cysM_Rv1336|gene1368|transcript|Transcript_gene1368|Coding|1/1|c.522C>T|p.Pro174Pro|522/972|522/972|174/323||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1503915C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1503915C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:46 0/0:0:0:0:0:25:0%:48:1E0:53:25:9:16:25 0/0:0:0:0:0:54:0%:99:1E0:48:54:26:28:54 0/0:39:1:1:0:28:3.57%:41:5E-1:50:27:14:13:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:27 0/0:0:0:0:0:36:0%:66:1E0:52:36:24:12:36 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:24 0/0:0:0:0:0:32:0%:59:1E0:49:32:21:11:33 0/0:0:0:0:0:36:0%:66:1E0:53:36:18:18:36 0/0:37:1:1:0:27:3.7%:41:5E-1:50:26:8:18:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:11:0%:22:1E0:48:11:3:8:11 0/0:0:0:0:0:52:0%:96:1E0:45:52:18:34:52 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:40:0%:74:1E0:46:40:23:17:41 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:32:0%:59:1E0:47:32:11:21:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:45:0%:85:1E0:43:45:16:29:46 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:39:1:0:1:34:2.94%:51:5E-1:45:33:16:17:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:19 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:39:1:0:1:27:3.7%:41:5E-1:44:26:11:15:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:32 0/0:0:0:0:0:35:0%:67:1E0:48:35:20:15:35 0/0:38:1:0:1:25:4%:38:5E-1:45:24:12:12:25 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:30 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:36 0/0:0:0:0:0:55:0%:99:1E0:47:55:29:26:55 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:39:1:1:0:50:2%:80:5E-1:43:49:23:26:51 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:51 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:39:1:0:1:61:1.64%:99:5E-1:46:60:28:32:61 0/0:0:0:0:0:51:0%:97:1E0:43:51:19:32:51 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:52:30:14:16:30 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:37:1:0:1:38:2.63%:58:5E-1:49:37:21:16:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:56:0%:99:1E0:42:56:19:37:57 0/0:60:1:0:1:43:2.33%:70:5E-1:41:42:16:26:44 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:23:11:35 0/0:0:0:0:0:39:0%:74:1E0:46:39:25:14:40 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:37:1:0:1:41:2.44%:66:5E-1:44:40:19:21:41 0/0:0:0:0:0:62:0%:99:1E0:46:62:33:29:63 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:27 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:30 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:19 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:36:0%:66:1E0:51:36:11:25:36 0/0:0:0:0:0:21:0%:40:1E0:53:21:12:9:22 0/0:0:0:0:0:35:0%:67:1E0:50:35:16:19:35 0/0:0:0:0:0:44:0%:81:1E0:46:44:22:22:44 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:51:1:0:1:30:3.33%:44:5E-1:43:29:20:9:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:42 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:38:0%:70:1E0:44:38:13:25:38 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:39:1:0:1:28:3.57%:41:5E-1:41:27:16:11:30 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:60:1:0:1:21:4.76%:31:5E-1:53:20:10:10:21 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:30 0/0:0:0:0:0:42:0%:77:1E0:49:42:24:18:42 0/0:0:0:0:0:21:0%:40:1E0:51:21:12:9:21 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:46 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:18:0%:32:1E0:50:18:10:8:18 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:20 0/0:0:0:0:0:30:0%:55:1E0:45:30:9:21:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:24 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:47 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:37:1:0:1:26:3.85%:38:5E-1:42:25:14:11:26 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:63:0%:99:1E0:44:63:33:30:63 0/0:0:0:0:0:49:0%:93:1E0:44:49:21:28:51 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:22 0/0:0:0:0:0:54:0%:99:1E0:40:54:27:27:55 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:41 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:45 0/0:0:0:0:0:54:0%:99:1E0:43:54:27:27:59 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:52 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:39 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:71:0%:99:1E0:40:71:40:31:73 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:51 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:38 0/0:0:0:0:0:43:0%:82:1E0:42:43:14:29:45 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:45 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:32 MTB_anc 1505194 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|murI_Rv1338|gene1370|transcript|Transcript_gene1370|Coding|1/1|c.120C>T|p.Gly40Gly|120/816|120/816|40/271||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1505194C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1505194C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:39:30:9:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:36:18:18:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:53:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:24:11:13:25:96%:99:3.101E-14:0:0:0:0:25 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:34:20:14:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:47:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:49:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:37:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:48:32:16:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 1505973 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv1339_Rv1339|gene1371|transcript|Transcript_gene1371|Coding|1/1|c.57A>G|p.Arg19Arg|57/822|57/822|19/273||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1505973A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1505973A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:60:36:24:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:51:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:59:40:19:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:44:32:12:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:56:36:20:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:55:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:39:24:15:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:63:39:24:63:100%:99:1.657E-37:0:0:0:0:64 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 1506831 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|rphA_Rv1340|gene1372|transcript|Transcript_gene1372|Coding|1/1|c.77C>A|p.Pro26Gln|77/780|77/780|26/259||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1506831C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1506831C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:50 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:18 0/0:0:0:0:0:63:0%:99:1E0:45:63:33:30:63 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:22 0/0:60:1:1:0:30:3.33%:44:5E-1:47:29:15:14:31 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:31 0/0:0:0:0:0:15:0%:29:1E0:49:15:9:6:15 0/0:60:1:0:1:21:4.76%:31:5E-1:47:20:8:12:21 0/0:0:0:0:0:24:0%:44:1E0:50:24:15:9:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:51:0%:97:1E0:44:51:33:18:52 0/0:0:0:0:0:15:0%:29:1E0:46:15:6:9:15 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:25 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:27 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:20 0/0:0:0:0:0:17:0%:33:1E0:54:17:5:12:17 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:50:0%:92:1E0:43:50:30:20:52 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:12:25:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:31:0%:59:1E0:51:31:17:14:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:19:7:26 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:49 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:47 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:45 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:43:0%:82:1E0:47:43:25:18:44 0/0:60:1:1:0:49:2.04%:80:5E-1:48:48:21:27:49 0/0:0:0:0:0:12:0%:21:1E0:50:12:5:7:13 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:40 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:60:1:0:1:28:3.57%:41:5E-1:41:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:50:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:46:0%:85:1E0:45:46:28:18:46 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:16:0%:29:1E0:50:16:9:7:16 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:26 0/0:0:0:0:0:19:0%:37:1E0:52:19:10:9:19 0/0:0:0:0:0:46:0%:85:1E0:47:46:21:25:46 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:60:1:1:0:38:2.63%:58:5E-1:46:37:15:22:38 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:42 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:49:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:21:10:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:24:0%:44:1E0:46:24:16:8:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:32 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:25 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:29 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:37 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:20 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:43:0%:82:1E0:40:43:26:17:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:29 0/0:0:0:0:0:17:0%:33:1E0:44:17:5:12:17 0/0:0:0:0:0:24:0%:44:1E0:46:24:16:8:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:49:28:21:7:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:15:0%:29:1E0:44:15:5:10:15 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:39 0/0:0:0:0:0:20:0%:36:1E0:46:20:14:6:20 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:47 0/0:0:0:0:0:48:0%:89:1E0:43:48:32:16:49 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:27:16:44 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:51 0/0:0:0:0:0:40:0%:74:1E0:40:40:24:16:40 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:52:0%:96:1E0:43:52:31:21:52 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:50:0%:92:1E0:40:50:30:20:52 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:37:1:1:0:37:2.7%:59:5E-1:44:36:18:18:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:33 0/0:60:1:0:1:27:3.7%:41:5E-1:42:26:11:15:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:42 0/0:34:1:0:1:35:2.86%:55:5E-1:41:34:15:19:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:18:0%:32:1E0:41:18:13:5:18 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:46 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:28 MTB_anc 1511204 . C G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|mbtN_Rv1346|gene1378|transcript|Transcript_gene1378|Coding|1/1|c.359C>G|p.Ala120Gly|359/1161|359/1161|120/386||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1511204C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1511204C>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:49 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:23 0/0:0:0:0:0:57:0%:99:1E0:46:57:32:25:57 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:26 0/0:0:0:0:0:17:0%:33:1E0:45:17:11:6:17 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:39 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:48:28:18:10:28 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:46 0/0:0:0:0:0:15:0%:29:1E0:46:15:9:6:16 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:49 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:19:0%:37:1E0:50:19:8:11:21 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:36 0/0:0:0:0:0:50:0%:92:1E0:42:50:29:21:52 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 0/0:0:0:0:0:53:0%:99:1E0:45:53:34:19:53 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:30 0/0:0:0:0:0:26:0%:47:1E0:52:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:16:0%:29:1E0:46:16:12:4:16 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:34:1:1:0:30:3.33%:44:5E-1:45:29:15:14:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:44:0%:81:1E0:48:44:22:22:44 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:46:0%:85:1E0:47:46:20:26:47 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:52:0%:96:1E0:44:52:29:23:52 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:19 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:24:9:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:39 0/0:0:0:0:0:44:0%:81:1E0:46:44:29:15:44 0/0:0:0:0:0:25:0%:48:1E0:48:25:17:8:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:24:10:35 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:17 0/1:46:10:3:7:43:23.26%:32:5.4148E-4:41:33:12:21:44 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:52 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:40:0%:74:1E0:44:40:26:14:41 0/0:0:0:0:0:34:0%:62:1E0:50:34:17:17:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:39 0/0:0:0:0:0:46:0%:85:1E0:45:46:28:18:47 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:38 0/0:0:0:0:0:56:0%:99:1E0:45:56:25:31:58 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:29 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:15:0%:29:1E0:50:15:11:4:15 0/0:0:0:0:0:22:0%:40:1E0:50:22:7:15:22 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:36 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:14:0%:25:1E0:50:14:10:4:14 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:49:34:21:13:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:20:0%:36:1E0:48:20:8:12:20 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:23 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:21:0%:40:1E0:54:21:8:13:21 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:55:0%:99:1E0:44:55:33:22:55 0/0:0:0:0:0:18:0%:32:1E0:40:18:12:6:19 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:30 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:29:11:40 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:31 0/0:0:0:0:0:18:0%:32:1E0:42:18:3:15:21 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:20 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:38 0/0:0:0:0:0:51:0%:97:1E0:40:51:30:21:53 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:40 0/0:31:1:1:0:26:3.85%:38:5E-1:43:25:13:12:26 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:51 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:43 0/0:0:0:0:0:24:0%:44:1E0:45:24:18:6:24 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 0/0:0:0:0:0:48:0%:89:1E0:39:48:25:23:51 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:42 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:41:0%:78:1E0:38:41:27:14:42 0/0:0:0:0:0:60:0%:99:1E0:39:60:34:26:61 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:39 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:36 0/0:0:0:0:0:49:0%:93:1E0:41:49:26:23:50 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:34 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:36 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:42 0/0:0:0:0:0:60:0%:99:1E0:40:60:30:30:61 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:40 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:44 0/0:0:0:0:0:41:0%:78:1E0:39:41:24:17:42 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:61:0%:99:1E0:44:61:30:31:63 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:45 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:39 MTB_anc 1512662 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|intergenic_region|MODIFIER|mbtK_Rv1347c-leuW_Rvnt19|gene1379-gene1380|intergenic_region|gene1379-gene1380|||n.1512662T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:45:51:21:30:51 0/0:0:0:0:0:21:0%:40:1E0:48:21:15:6:21 0/0:0:0:0:0:55:0%:99:1E0:45:55:24:31:56 0/0:0:0:0:0:28:0%:51:1E0:49:28:9:19:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:9:19:29 0/0:0:0:0:0:36:0%:66:1E0:52:36:15:21:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:50:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:40 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:19 0/0:0:0:0:0:37:0%:70:1E0:47:37:14:23:38 0/0:0:0:0:0:22:0%:40:1E0:41:22:16:6:22 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:48 0/0:0:0:0:0:22:0%:40:1E0:55:22:13:9:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:43 0/0:0:0:0:0:53:0%:99:1E0:45:53:27:26:53 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:39 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:48 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:13:0%:25:1E0:54:13:7:6:13 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:43 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:50:0%:92:1E0:41:50:29:21:51 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:38 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:44 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:44 0/0:0:0:0:0:65:0%:99:1E0:43:65:32:33:66 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:7:11:19 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:45 0/0:0:0:0:0:29:0%:55:1E0:46:29:9:20:29 0/0:0:0:0:0:14:0%:25:1E0:52:14:8:6:14 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:51 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:33 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:39 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:38 0/0:0:0:0:0:17:0%:33:1E0:53:17:7:10:17 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:48 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:48 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:25 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:38:0%:70:1E0:43:38:12:26:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:29 0/0:0:0:0:0:15:0%:29:1E0:49:15:8:7:15 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:26 0/0:0:0:0:0:50:0%:92:1E0:40:50:22:28:52 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:24 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:56:0%:99:1E0:42:56:26:30:57 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:49 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 1/1:44:32:17:15:33:96.97%:99:4.7095E-18:39:1:0:1:34 0/0:26:1:0:1:52:1.92%:83:5E-1:38:51:20:31:52 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:44 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:38 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:21 0/0:0:0:0:0:54:0%:99:1E0:40:54:21:33:57 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:26:17:43 0/0:0:0:0:0:42:0%:77:1E0:39:42:25:17:46 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:56:0%:99:1E0:41:56:26:30:56 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:43 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:0:42:0%:77:1E0:43:42:13:29:42 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:41 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:51:0%:97:1E0:45:51:24:27:52 0/0:0:0:0:0:61:0%:99:1E0:42:61:30:31:62 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:35 MTB_anc 1513532 . A T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|irtA_Rv1348|gene1381|transcript|Transcript_gene1381|Coding|1/1|c.486A>T|p.Gln162His|486/2580|486/2580|162/859||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.1513532A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1513532A>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:14:0%:25:1E0:44:14:5:9:14 0/0:0:0:0:0:52:0%:96:1E0:45:52:23:29:52 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:32 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:32 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:19 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/1:46:9:5:4:34:26.47%:29:1.0644E-3:49:25:10:15:34 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:56:0%:99:1E0:40:56:19:37:56 0/0:0:0:0:0:17:0%:33:1E0:54:17:9:8:17 0/0:0:0:0:0:45:0%:85:1E0:40:45:20:25:45 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:49 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:16:0%:29:1E0:43:16:9:7:16 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:53:0%:99:1E0:45:53:30:23:53 0/0:0:0:0:0:42:0%:77:1E0:50:42:20:22:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:38:0%:70:1E0:40:38:13:25:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:16 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:8:0%:14:1E0:45:8:3:5:8 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:38:1:0:1:27:3.7%:41:5E-1:38:26:12:14:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:44 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:0:0:0:0:31:0%:59:1E0:44:31:9:22:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:19:0%:37:1E0:40:19:12:7:19 0/0:0:0:0:0:42:0%:77:1E0:48:42:20:22:43 0/0:0:0:0:0:50:0%:92:1E0:46:50:25:25:51 0/0:0:0:0:0:34:0%:62:1E0:46:34:23:11:34 0/0:0:0:0:0:44:0%:81:1E0:47:44:21:23:45 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:18 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:50:26:15:11:27 0/0:0:0:0:0:32:0%:59:1E0:51:32:14:18:33 0/0:0:0:0:0:15:0%:29:1E0:46:15:10:5:15 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:45:23:6:17:23 0/0:0:0:0:0:24:0%:44:1E0:53:24:12:12:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:34:0%:62:1E0:47:34:12:22:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:10:21:32 0/0:0:0:0:0:21:0%:40:1E0:50:21:11:10:21 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:51 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:17 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:40 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:39:0%:74:1E0:38:39:15:24:40 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:37:0%:70:1E0:43:37:11:26:37 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:25 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:50 0/0:0:0:0:0:58:0%:99:1E0:40:58:25:33:58 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:14 0/0:0:0:0:0:46:0%:85:1E0:38:46:16:30:50 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:36 0/0:0:0:0:0:46:0%:85:1E0:37:46:13:33:48 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:38 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:40:39:14:25:40 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:43:0%:82:1E0:39:43:14:29:44 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:32 0/0:0:0:0:0:47:0%:89:1E0:43:47:15:32:47 0/0:0:0:0:0:59:0%:99:1E0:41:59:24:35:60 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:14:26:40 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:20 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:48 0/0:0:0:0:0:53:0%:99:1E0:42:53:19:34:54 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 MTB_anc 1518453 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1351_Rv1351|gene1384|transcript|Transcript_gene1384|Coding|1/1|c.223C>T|p.His75Tyr|223/330|223/330|75/109||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1518453C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1518453C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:58:25:33:59:98.31%:99:2.4634E-33:39:1:1:0:61 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:52:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:52:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:61:38:23:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:46:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:61:28:33:61:100%:99:2.609E-36:0:0:0:0:65 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:56 1/1:39:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:36:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:38:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 MTB_anc 1519379 . GC G . PASS AC=14;AF=0.047;AN=300;ANN=G|frameshift_variant|HIGH|Rv1353c_Rv1353c|gene1386|transcript|Transcript_gene1386|Coding|1/1|c.606delG|p.His203fs|606/786|606/786|202/261||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1519380delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1519380delC||||||;HET=0;LOF=(Rv1353c_Rv1353c|gene1386|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:38:59:24:35:59 0/0:0:0:0:0:14:0%:25:1E0:46:14:6:8:14 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:16 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:37:35:15:20:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:51:0%:97:1E0:38:51:19:32:53 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:21 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:26 0/0:0:0:0:0:56:0%:99:1E0:39:56:24:32:57 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:34 0/0:38:1:1:0:33:3.03%:52:5E-1:39:32:12:20:34 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:38:1:1:0:19:5.26%:28:5E-1:40:18:8:10:20 0/0:0:0:0:0:13:0%:25:1E0:40:13:10:3:13 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:38:0%:70:1E0:39:38:13:25:39 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:39 0/0:0:0:0:0:38:0%:70:1E0:38:38:22:16:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:25:16:42 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 0/0:0:0:0:0:38:0%:70:1E0:37:38:16:22:38 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:21:0%:40:1E0:40:21:4:17:21 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:30 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:7:26:34 0/0:0:0:0:0:49:0%:93:1E0:38:49:22:27:50 0/0:0:0:0:0:39:0%:74:1E0:38:39:15:24:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:39:0%:74:1E0:40:39:14:25:39 0/0:0:0:0:0:11:0%:22:1E0:41:11:5:6:11 0/0:0:0:0:0:19:0%:37:1E0:39:19:6:13:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:7:18:27 0/0:0:0:0:0:52:0%:96:1E0:39:52:22:30:53 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:38 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:30 0/0:38:1:1:0:48:2.08%:76:5E-1:39:47:24:23:48 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:38 0/0:0:0:0:0:42:0%:77:1E0:38:42:14:28:42 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:24 0/0:0:0:0:0:37:0%:70:1E0:37:37:23:14:38 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:26 0/0:0:0:0:0:39:0%:74:1E0:39:39:14:25:39 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:30 0/0:38:1:1:0:28:3.57%:41:5E-1:43:27:11:16:30 0/0:0:0:0:0:14:0%:25:1E0:41:14:7:7:14 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:29 0/0:0:0:0:0:45:0%:85:1E0:39:45:18:27:46 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:27:0%:52:1E0:36:27:15:12:28 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:30 0/0:0:0:0:0:33:0%:63:1E0:37:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:37:28:8:20:30 0/0:0:0:0:0:41:0%:78:1E0:38:41:14:27:41 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:11:24:35 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:28 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:38:33:10:23:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:27 0/0:0:0:0:0:42:0%:77:1E0:36:42:14:28:42 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:45:0%:85:1E0:39:45:20:25:45 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:24 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:26 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:25 1/1:39:21:5:16:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:28:16:12:27:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:41:0%:78:1E0:37:41:23:18:42 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 1/1:39:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:7:18:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:36:29:17:12:31 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:31:0%:59:1E0:36:31:15:16:32 0/0:0:0:0:0:34:0%:62:1E0:36:34:15:19:36 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:11:17:28 0/0:0:0:0:0:15:0%:29:1E0:38:15:4:11:16 0/0:0:0:0:0:58:0%:99:1E0:38:58:32:26:59 0/0:0:0:0:0:40:0%:74:1E0:37:40:14:26:40 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:33 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:26 0/0:0:0:0:0:45:0%:85:1E0:36:45:22:23:47 0/0:0:0:0:0:37:0%:70:1E0:36:37:17:20:37 0/0:0:0:0:0:31:0%:59:1E0:37:31:19:12:34 0/0:0:0:0:0:33:0%:63:1E0:35:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:36:34:17:17:34 0/0:0:0:0:0:47:0%:89:1E0:37:47:26:21:48 0/0:0:0:0:0:35:0%:67:1E0:36:35:18:17:36 0/0:0:0:0:0:32:0%:59:1E0:35:32:21:11:32 0/0:0:0:0:0:35:0%:67:1E0:37:35:14:21:36 0/0:0:0:0:0:38:0%:70:1E0:36:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:35:36:22:14:36 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:44:0%:81:1E0:38:44:18:26:44 0/0:0:0:0:0:43:0%:82:1E0:39:43:17:26:43 0/0:0:0:0:0:32:0%:59:1E0:39:32:22:10:33 0/0:0:0:0:0:35:0%:67:1E0:37:35:16:19:36 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:26 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:23 0/0:0:0:0:0:32:0%:59:1E0:36:32:14:18:34 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:28 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:29 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:16 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:29 0/0:0:0:0:0:50:0%:92:1E0:38:50:23:27:50 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:27 MTB_anc 1523175 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|moeY_Rv1355c|gene1388|transcript|Transcript_gene1388|Coding|1/1|c.858G>T|p.Ala286Ala|858/2148|858/2148|286/715||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1523175C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1523175C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:48:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:61:31:30:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:50:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:63:30:33:63:100%:99:1.657E-37:0:0:0:0:67 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:29:19:10:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:24:17:7:25:96%:99:2.0568E-13:39:1:1:0:26 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:69:35:34:69:100%:99:4.233E-41:0:0:0:0:73 1/1:39:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:54 1/1:40:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:53:17:36:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 1523791 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|moeY_Rv1355c|gene1388|transcript|Transcript_gene1388|Coding|1/1|c.242C>T|p.Pro81Leu|242/2148|242/2148|81/715||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1523791G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1523791G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:55:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:51:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:60:34:26:60:100%:99:1.035E-35:0:0:0:0:62 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:36:16:20:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:53:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:60:30:30:60:100%:99:1.035E-35:0:0:0:0:63 1/1:45:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:42:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:66:28:38:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:45:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:49:31:18:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 1524754 . G GT . PASS AC=2;AF=6.667e-03;AN=300;ANN=GT|frameshift_variant|HIGH|Rv1356c_Rv1356c|gene1389|transcript|Transcript_gene1389|Coding|1/1|c.66dupA|p.Pro23fs|66/792|66/792|22/263||,GT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1524754_1524755insT||||||,GT|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1524754_1524755insT||||||;HET=0;LOF=(Rv1356c_Rv1356c|gene1389|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:44:46:31:15:47 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:61:0%:99:1E0:48:61:33:28:62 0/0:0:0:0:0:46:0%:85:1E0:45:46:25:21:46 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:16:8:24 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:52:0%:96:1E0:46:52:22:30:52 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:0:0:0:0:48:0%:89:1E0:46:48:27:21:49 0/0:0:0:0:0:37:0%:70:1E0:45:37:25:12:38 0/0:0:0:0:0:39:0%:74:1E0:52:39:18:21:39 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:25:14:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:26 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:17:6:24 0/0:0:0:0:0:59:0%:99:1E0:45:59:27:32:60 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:34:0%:62:1E0:46:34:11:23:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:19:7:26 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:30 0/0:0:0:0:0:54:0%:99:1E0:49:54:30:24:56 0/0:0:0:0:0:51:0%:97:1E0:46:51:21:30:51 0/0:0:0:0:0:50:0%:92:1E0:46:50:26:24:50 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:46 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 1/1:42:31:17:14:32:96.88%:99:1.8007E-17:33:1:1:0:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:47 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:42 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 0/0:0:0:0:0:28:0%:51:1E0:49:28:16:12:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:41 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:19 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:38 0/0:0:0:0:0:46:0%:85:1E0:50:46:24:22:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:38 0/0:0:0:0:0:58:0%:99:1E0:45:58:32:26:60 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:57:0%:99:1E0:46:57:24:33:57 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:15:26:41 0/0:0:0:0:0:26:0%:47:1E0:51:26:10:16:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:38:0%:70:1E0:51:38:25:13:38 0/0:0:0:0:0:30:0%:55:1E0:51:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:29 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:44 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:24 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:26 0/0:0:0:0:0:31:0%:59:1E0:48:31:11:20:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:54:0%:99:1E0:41:54:24:30:55 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:26:0%:47:1E0:52:26:12:14:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 0/0:0:0:0:0:41:0%:78:1E0:47:41:13:28:41 0/0:0:0:0:0:34:0%:62:1E0:48:34:21:13:34 0/0:0:0:0:0:43:0%:82:1E0:48:43:16:27:44 0/0:0:0:0:0:27:0%:52:1E0:53:27:16:11:27 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:49 0/0:0:0:0:0:44:0%:81:1E0:46:44:25:19:44 0/0:0:0:0:0:57:0%:99:1E0:45:57:29:28:58 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:41 0/0:0:0:0:0:34:0%:62:1E0:46:34:12:22:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:43 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:46 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:35 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:44 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:45 0/0:0:0:0:0:67:0%:99:1E0:42:67:32:35:68 0/0:0:0:0:0:60:0%:99:1E0:41:60:36:24:60 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:23 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:59:0%:99:1E0:39:59:31:28:63 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:41 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:46 0/0:0:0:0:0:53:0%:99:1E0:41:53:24:29:55 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:52 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:52 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:42 0/0:0:0:0:0:47:0%:89:1E0:43:47:19:28:47 0/0:0:0:0:0:52:0%:96:1E0:41:52:25:27:52 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:55 0/0:0:0:0:0:56:0%:99:1E0:41:56:26:30:57 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:46 0/0:0:0:0:0:48:0%:89:1E0:43:48:30:18:49 0/0:0:0:0:0:57:0%:99:1E0:40:57:30:27:59 0/0:0:0:0:0:55:0%:99:1E0:42:55:29:26:55 0/0:0:0:0:0:58:0%:99:1E0:40:58:31:27:58 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:44 0/0:0:0:0:0:29:0%:55:1E0:47:29:18:11:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:48 0/0:0:0:0:0:52:0%:96:1E0:43:52:26:26:55 0/0:0:0:0:0:52:0%:96:1E0:39:52:23:29:52 MTB_anc 1527770 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1358_Rv1358|gene1391|transcript|Transcript_gene1391|Coding|1/1|c.1159T>G|p.Cys387Gly|1159/3480|1159/3480|387/1159||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1527770T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1527770T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:31 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:41:16:25:42:97.62%:99:2.5612E-23:60:1:1:0:42 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:33:14:19:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:51:17:34:52:98.08%:99:2.5024E-30:0:0:0:0:53 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:53:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:30:17:13:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:21:10:11:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:52:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:17:12:30:96.67%:99:2.6212E-16:34:1:1:0:30 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:73:43:30:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:50:35:15:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:45:26:19:47:95.74%:99:7.2338E-25:37:2:1:1:49 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:67:34:33:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 1532183 . A C . PASS AC=10;AF=0.033;AN=300;ANN=C|missense_variant|MODERATE|Rv1360_Rv1360|gene1393|transcript|Transcript_gene1393|Coding|1/1|c.836A>C|p.Glu279Ala|836/1023|836/1023|279/340||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532183A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1532183A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:44:46:13:33:47 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:25 0/0:0:0:0:0:53:0%:99:1E0:43:53:23:30:54 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:38:0%:70:1E0:48:38:8:30:39 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:29 0/0:0:0:0:0:18:0%:32:1E0:48:18:7:11:21 0/0:38:1:0:1:47:2.13%:77:5E-1:45:46:25:21:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:9:23:32 0/0:0:0:0:0:38:0%:70:1E0:41:38:12:26:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:51:0%:97:1E0:43:51:28:23:53 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:31 0/0:0:0:0:0:24:0%:44:1E0:40:24:7:17:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:16:0%:29:1E0:44:16:4:12:16 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:30 0/0:0:0:0:0:55:0%:99:1E0:43:55:23:32:57 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:23 0/0:0:0:0:0:48:0%:89:1E0:46:48:20:28:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:17:28:45 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:14 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:26 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:34 0/0:0:0:0:0:43:0%:82:1E0:47:43:17:26:44 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:39 0/0:0:0:0:0:61:0%:99:1E0:47:61:28:33:62 0/0:0:0:0:0:46:0%:85:1E0:42:46:16:30:46 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:42 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:38 0/0:0:0:0:0:42:0%:77:1E0:43:42:14:28:47 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:5:21:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:50:0%:92:1E0:43:50:17:33:53 0/0:0:0:0:0:46:0%:85:1E0:41:46:13:33:47 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:46 0/0:0:0:0:0:12:0%:21:1E0:45:12:5:7:12 0/0:38:1:0:1:37:2.7%:59:5E-1:41:36:17:19:39 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:24 0/0:0:0:0:0:43:0%:82:1E0:45:43:16:27:44 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:29 0/0:0:0:0:0:59:0%:99:1E0:42:59:19:40:61 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:40 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:48:0%:89:1E0:43:48:11:37:48 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:17:29:46 0/0:0:0:0:0:46:0%:85:1E0:42:46:15:31:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:40 0/0:0:0:0:0:52:0%:96:1E0:46:52:21:31:54 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:11:27:39 0/0:0:0:0:0:15:0%:29:1E0:41:15:4:11:15 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:34 0/0:0:0:0:0:18:0%:32:1E0:47:18:6:12:18 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:42:0%:77:1E0:48:42:24:18:46 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:20 0/0:60:1:1:0:25:4%:38:5E-1:42:24:6:18:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:9:23:34 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:50:31:11:20:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:12:26:40 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:27 0/0:0:0:0:0:37:0%:70:1E0:46:37:11:26:39 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:49 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:41 0/0:0:0:0:0:46:0%:85:1E0:45:46:16:30:48 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:42 0/0:0:0:0:0:22:0%:40:1E0:41:22:4:18:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:5:18:23 0/0:0:0:0:0:36:0%:66:1E0:45:36:12:24:39 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:17 0/0:0:0:0:0:34:0%:62:1E0:44:34:9:25:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:9:21:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:9:19:30 0/0:0:0:0:0:29:0%:55:1E0:38:29:6:23:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:37:0%:70:1E0:39:37:13:24:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:14:27:44 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:38 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:21 0/0:0:0:0:0:65:0%:99:1E0:42:65:33:32:65 0/0:0:0:0:0:60:0%:99:1E0:40:60:18:42:60 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:41 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:26 0/0:0:0:0:0:47:0%:89:1E0:43:47:16:31:50 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:33 0/0:0:0:0:0:49:0%:93:1E0:41:49:21:28:53 0/0:37:1:0:1:34:2.94%:51:5E-1:39:33:10:23:35 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:48 0/0:0:0:0:0:39:0%:74:1E0:39:39:10:29:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:43 1/1:41:45:19:26:46:97.83%:99:1.1441E-25:33:1:0:1:46 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:32 1/1:40:50:22:28:51:98.04%:99:1.3013E-28:33:1:0:1:51 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:39 0/0:0:0:0:0:59:0%:99:1E0:39:59:26:33:63 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:40 0/0:0:0:0:0:46:0%:85:1E0:43:46:14:32:47 0/0:0:0:0:0:44:0%:81:1E0:40:44:14:30:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:14:26:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:39 0/0:0:0:0:0:53:0%:99:1E0:42:53:21:32:54 0/0:0:0:0:0:53:0%:99:1E0:41:53:21:32:55 MTB_anc 1532656 . G T . PASS AC=296;AF=1.00;AN=296;ANN=T|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.978C>A|p.Ala326Ala|978/1191|978/1191|326/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532656G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532656G>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:23:12:11:24:95.83%:99:7.7525E-13:29:1:1:0:24 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:49:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:30:8:22:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:42:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:16:11:5:17:94.12%:81:7.7134E-9:38:1:1:0:17 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:18:11:31:93.55%:99:1.1344E-15:36:2:2:0:31 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 1532659 . C T . PASS AC=294;AF=1.00;AN=294;ANN=T|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.975G>A|p.Gln325Gln|975/1191|975/1191|325/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532659C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532659C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:23:12:11:24:95.83%:99:7.7525E-13:32:1:1:0:24 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:16:11:5:17:94.12%:81:7.7134E-9:36:1:1:0:17 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:22:9:13:23:95.65%:99:2.9149E-12:60:1:0:1:24 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:18:11:30:96.67%:99:2.6212E-16:37:1:1:0:31 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 1532660 . T G . PASS AC=294;AF=1.00;AN=294;ANN=G|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.974A>C|p.Gln325Pro|974/1191|974/1191|325/396||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532660T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532660T>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:23:12:11:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:49:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:15:10:5:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:16:11:5:17:94.12%:81:7.7134E-9:39:1:1:0:17 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:33:15:18:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:46:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:28:17:11:30:93.33%:99:4.194E-15:35:2:2:0:31 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 1532777 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.857A>G|p.Gln286Arg|857/1191|857/1191|286/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532777T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532777T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:41:51:33:18:52 0/0:0:0:0:0:15:0%:29:1E0:51:15:5:10:15 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:55 0/0:0:0:0:0:17:0%:33:1E0:44:17:5:12:17 0/0:0:0:0:0:29:0%:55:1E0:50:29:13:16:30 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:44:0%:81:1E0:50:44:21:23:45 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:30:0%:55:1E0:51:30:14:16:30 0/0:0:0:0:0:23:0%:44:1E0:48:23:8:15:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:42 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:46 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:19:0%:37:1E0:49:19:10:9:19 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:17 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:35 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:43 0/0:0:0:0:0:44:0%:81:1E0:47:44:26:18:44 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:42 0/0:0:0:0:0:21:0%:40:1E0:49:21:8:13:22 0/0:0:0:0:0:24:0%:44:1E0:47:24:8:16:25 0/0:60:1:0:1:14:7.14%:17:5E-1:47:13:6:7:15 0/0:60:1:1:0:27:3.7%:41:5E-1:50:26:12:14:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:42:0%:77:1E0:48:42:19:23:43 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:44:0%:81:1E0:46:44:22:22:44 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:22:10:33 0/0:0:0:0:0:71:0%:99:1E0:47:71:34:37:71 0/0:0:0:0:0:66:0%:99:1E0:45:66:35:31:68 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:24 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:29 0/0:0:0:0:0:45:0%:85:1E0:46:45:22:23:45 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:45 0/0:0:0:0:0:9:0%:18:1E0:47:9:5:4:9 0/0:39:1:0:1:40:2.5%:62:5E-1:46:39:21:18:40 0/0:0:0:0:0:18:0%:32:1E0:50:18:6:12:18 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:10:25:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:55:0%:99:1E0:45:55:25:30:56 0/0:0:0:0:0:30:0%:55:1E0:48:30:11:19:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:37:1:1:0:47:2.13%:77:5E-1:43:46:19:27:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:52:0%:96:1E0:48:52:24:28:52 0/1:52:9:5:4:70:12.86%:28:1.4851E-3:45:61:37:24:71 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:43 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:48 0/0:0:0:0:0:27:0%:52:1E0:49:27:8:19:27 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:17 0/0:0:0:0:0:37:0%:70:1E0:48:37:22:15:37 0/0:0:0:0:0:41:0%:78:1E0:52:41:23:18:41 0/0:0:0:0:0:14:0%:25:1E0:44:14:6:8:14 0/0:0:0:0:0:39:0%:74:1E0:48:39:17:22:39 0/0:60:1:0:1:31:3.23%:48:5E-1:42:30:15:15:32 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:60:1:0:1:47:2.13%:77:5E-1:45:46:27:19:47 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:40:0%:74:1E0:49:40:26:14:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:49:24:17:7:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:49 0/0:0:0:0:0:48:0%:89:1E0:41:48:20:28:48 0/0:0:0:0:0:83:0%:99:1E0:44:83:39:44:83 0/0:0:0:0:0:25:0%:48:1E0:40:25:9:16:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:49:2:1:1:25:8%:31:2.449E-1:47:23:11:12:25 0/0:0:0:0:0:45:0%:85:1E0:44:45:17:28:46 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:38:1:0:1:37:2.7%:59:5E-1:45:36:11:25:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:53:1:0:1:33:3.03%:52:5E-1:40:32:15:17:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:6:22:28 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:58:0%:99:1E0:42:58:32:26:58 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:50 0/0:0:0:0:0:19:0%:37:1E0:42:19:6:13:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:25 0/0:0:0:0:0:54:0%:99:1E0:40:54:25:29:56 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:40 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:38 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:27 0/0:0:0:0:0:38:0%:70:1E0:40:38:11:27:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:57:0%:99:1E0:37:57:20:37:59 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:49 0/0:0:0:0:0:46:0%:85:1E0:40:46:27:19:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:8:18:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:32 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:37 0/0:60:1:0:1:16:6.25%:21:5E-1:43:15:5:10:16 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/1:47:24:14:10:75:32%:81:6.6408E-9:45:51:24:27:75 0/0:0:0:0:0:55:0%:99:1E0:43:55:28:27:55 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:45 MTB_anc 1532778 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|stop_gained|HIGH|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.856C>T|p.Gln286*|856/1191|856/1191|286/396||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532778G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532778G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:41:52:34:18:52 0/0:0:0:0:0:13:0%:25:1E0:55:13:5:8:15 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:55 0/0:0:0:0:0:17:0%:33:1E0:45:17:5:12:17 0/0:0:0:0:0:29:0%:55:1E0:50:29:13:16:30 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:46:0%:85:1E0:49:46:22:24:46 0/0:0:0:0:0:15:0%:29:1E0:46:15:8:7:16 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:30 0/0:0:0:0:0:23:0%:44:1E0:49:23:8:15:23 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:42 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:45 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:21:0%:40:1E0:51:21:12:9:22 0/0:0:0:0:0:19:0%:37:1E0:49:19:10:9:19 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:17 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:43 0/0:0:0:0:0:45:0%:85:1E0:46:45:27:18:45 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:32 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:43 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:22 0/0:0:0:0:0:25:0%:48:1E0:46:25:8:17:25 0/0:60:1:0:1:15:6.67%:21:5E-1:46:14:6:8:15 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:22:13:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:42:0%:77:1E0:49:42:18:24:42 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:43 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:23:10:33 0/0:0:0:0:0:71:0%:99:1E0:47:71:34:37:71 0/0:0:0:0:0:66:0%:99:1E0:45:66:35:31:66 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:46:45:22:23:45 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:45 0/0:0:0:0:0:10:0%:17:1E0:46:10:6:4:10 0/0:39:1:0:1:40:2.5%:62:5E-1:46:39:21:18:40 0/0:0:0:0:0:18:0%:32:1E0:50:18:6:12:18 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:29 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:9:26:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:56:0%:99:1E0:45:56:24:32:57 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:31 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:38 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:37:1:1:0:47:2.13%:77:5E-1:43:46:19:27:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:52:0%:96:1E0:48:52:24:28:52 0/1:52:9:5:4:71:12.68%:28:1.4912E-3:45:62:37:25:71 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:43 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:48 0/0:0:0:0:0:27:0%:52:1E0:49:27:8:19:27 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:17 0/0:0:0:0:0:35:0%:67:1E0:49:35:20:15:36 0/0:37:1:1:0:42:2.38%:66:5E-1:51:41:22:19:42 0/0:0:0:0:0:14:0%:25:1E0:44:14:6:8:14 0/0:0:0:0:0:39:0%:74:1E0:49:39:17:22:39 0/0:60:1:0:1:31:3.23%:48:5E-1:41:30:15:15:32 0/0:0:0:0:0:22:0%:40:1E0:53:22:10:12:23 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:60:1:0:1:47:2.13%:77:5E-1:46:46:27:19:47 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:41:0%:78:1E0:50:41:26:15:41 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:38 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:23:0%:44:1E0:50:23:16:7:23 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:49 0/0:0:0:0:0:49:0%:93:1E0:41:49:20:29:49 0/0:0:0:0:0:82:0%:99:1E0:44:82:38:44:82 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:46:0%:85:1E0:44:46:18:28:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:19:8:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:11:25:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:18 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:38 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:6:20:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:58:0%:99:1E0:42:58:31:27:59 0/0:0:0:0:0:49:0%:93:1E0:43:49:21:28:50 0/0:0:0:0:0:19:0%:37:1E0:42:19:6:13:19 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:25 0/0:0:0:0:0:56:0%:99:1E0:40:56:26:30:56 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:39 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:27 0/0:0:0:0:0:38:0%:70:1E0:39:38:11:27:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:58:0%:99:1E0:37:58:21:37:59 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:49 0/0:37:1:0:1:46:2.17%:73:5E-1:41:45:27:18:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:44 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:8:17:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:38 0/0:0:0:0:0:16:0%:29:1E0:43:15:5:10:16 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/1:47:24:14:10:73:32.88%:82:6.1761E-9:45:49:23:26:75 0/0:0:0:0:0:54:0%:99:1E0:42:54:28:26:55 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:45 MTB_anc 1532790 . G C . PASS AC=5;AF=0.017;AN=300;ANN=C|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.844C>G|p.Gln282Glu|844/1191|844/1191|282/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532790G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532790G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:42:52:32:20:53 0/0:0:0:0:0:15:0%:29:1E0:51:15:5:10:15 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:54 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:26 0/0:0:0:0:0:44:0%:81:1E0:50:44:20:24:44 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:32 0/0:0:0:0:0:31:0%:59:1E0:52:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 0/0:0:0:0:0:20:0%:36:1E0:51:20:9:11:20 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:21:0%:40:1E0:51:21:12:9:22 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:27:0%:52:1E0:50:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/1:53:7:3:4:45:15.56%:22:6.0738E-3:47:38:23:15:46 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:24:0%:44:1E0:47:24:8:16:25 0/0:60:1:0:1:15:6.67%:21:5E-1:47:14:6:8:15 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:42:0%:77:1E0:50:42:20:22:42 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:29 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:48 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:23:10:33 0/0:56:7:4:3:71:9.86%:71:6.6905E-3:46:64:31:33:71 0/0:38:1:0:1:68:1.47%:99:5E-1:46:67:37:30:69 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:8:18:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:29 0/0:0:0:0:0:45:0%:85:1E0:46:45:22:23:45 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:48 0/0:0:0:0:0:10:0%:17:1E0:46:10:6:4:10 0/0:38:1:0:1:40:2.5%:62:5E-1:46:39:21:18:40 0/0:38:1:0:1:20:5%:27:5E-1:50:19:7:12:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:9:26:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:56:0%:99:1E0:45:56:23:33:56 0/0:38:2:1:1:35:5.71%:47:2.4638E-1:50:33:13:20:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:40 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:41 0/0:31:1:1:0:44:2.27%:69:5E-1:43:43:20:23:45 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:51:5:2:3:52:9.62%:52:2.8261E-2:49:47:22:25:52 0/1:52:12:7:5:71:16.9%:38:1.4713E-4:45:59:33:26:74 0/0:37:1:1:0:43:2.33%:70:5E-1:45:42:17:25:45 0/0:0:0:0:0:49:0%:93:1E0:42:49:20:29:50 0/0:0:0:0:0:27:0%:52:1E0:50:27:8:19:27 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 0/0:60:1:1:0:37:2.7%:59:5E-1:49:36:20:16:39 0/0:0:0:0:0:43:0%:82:1E0:50:43:24:19:43 0/0:0:0:0:0:13:0%:25:1E0:48:13:5:8:13 0/1:50:19:9:10:42:45.24%:68:1.3525E-7:49:23:10:13:43 0/0:60:1:0:1:31:3.23%:48:5E-1:40:30:15:15:33 0/0:0:0:0:0:23:0%:44:1E0:52:23:10:13:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:48:0%:89:1E0:45:48:28:20:49 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:41 0/1:49:15:12:3:41:36.59%:51:6.364E-6:52:26:14:12:41 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:23:0%:44:1E0:52:23:16:7:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:60:1:0:1:33:3.03%:52:5E-1:46:32:19:13:34 0/0:60:1:0:1:30:3.33%:44:5E-1:48:29:12:17:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:51 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:49 0/0:0:0:0:0:85:0%:99:1E0:44:85:41:44:86 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:35 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:40 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:47:0%:89:1E0:45:47:17:30:48 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:29 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:12:25:38 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:32 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:41 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:7:21:29 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:26 0/0:0:0:0:0:56:0%:99:1E0:42:56:29:27:60 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:48 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:21 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:55:0%:99:1E0:40:55:27:28:56 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:38 0/0:0:0:0:0:37:0%:70:1E0:38:37:15:22:38 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:30 0/0:0:0:0:0:39:0%:74:1E0:39:39:11:28:41 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:38 0/0:0:0:0:0:59:0%:99:1E0:38:59:22:37:60 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:49 0/0:0:0:0:0:45:0%:85:1E0:41:45:27:18:46 0/0:0:0:0:0:43:0%:82:1E0:40:43:17:26:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 0/0:0:0:0:0:16:0%:29:1E0:46:16:4:12:16 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/1:48:26:15:11:78:33.33%:89:1.2153E-9:43:52:24:28:79 0/0:0:0:0:0:56:0%:99:1E0:41:56:27:29:58 0/0:0:0:0:0:44:0%:81:1E0:41:44:18:26:44 MTB_anc 1532827 . A T . PASS AC=7;AF=0.023;AN=300;ANN=T|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.807T>A|p.Phe269Leu|807/1191|807/1191|269/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532827A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532827A>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:32:18:51 0/0:0:0:0:0:15:0%:29:1E0:53:15:5:10:15 0/0:39:1:0:1:56:1.79%:91:5E-1:43:55:27:28:56 0/0:0:0:0:0:23:0%:44:1E0:46:23:6:17:23 0/0:0:0:0:0:31:0%:59:1E0:49:31:12:19:31 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:51:0%:97:1E0:47:51:21:30:51 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:34 0/1:46:8:2:6:36:22.22%:25:2.5282E-3:54:28:18:10:36 0/0:0:0:0:0:25:0%:48:1E0:49:25:9:16:25 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:41 0/0:0:0:0:0:26:0%:47:1E0:50:26:12:14:27 0/0:0:0:0:0:52:0%:96:1E0:44:52:22:30:52 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:23:0%:44:1E0:51:23:13:10:23 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:20 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:39:1:0:1:22:4.55%:31:5E-1:48:21:12:9:22 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:37 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:46 0/0:0:0:0:0:45:0%:85:1E0:52:45:25:20:45 0/0:52:6:6:0:33:18.18%:23:1.219E-2:46:27:7:20:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:42 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:8:19:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:6:12:18 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:27 0/0:0:0:0:0:42:0%:77:1E0:49:42:23:19:42 0/0:0:0:0:0:25:0%:48:1E0:43:25:6:19:26 0/1:52:12:6:6:50:24%:39:1.1557E-4:45:38:18:20:52 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:38 0/0:52:3:1:2:68:4.41%:92:1.2222E-1:48:65:32:33:68 0/0:39:2:0:2:71:2.82%:99:2.4823E-1:46:69:36:33:73 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:37:1:1:0:36:2.78%:55:5E-1:44:35:16:19:36 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:37 0/0:0:0:0:0:44:0%:81:1E0:49:44:21:23:47 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:40 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:13:0%:25:1E0:53:13:8:5:13 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:37 0/0:0:0:0:0:21:0%:40:1E0:50:21:7:14:21 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:12:27:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:60:0%:99:1E0:46:60:25:35:60 0/0:0:0:0:0:36:0%:66:1E0:51:36:13:23:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:41 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/1:47:7:4:3:38:18.42%:22:5.7727E-3:45:31:15:16:39 0/0:46:6:3:3:57:10.53%:56:1.3607E-2:51:51:26:25:58 0/1:44:14:8:6:76:18.42%:45:3.1607E-5:48:62:32:30:79 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:50:0%:92:1E0:44:50:21:29:50 0/0:0:0:0:0:23:0%:44:1E0:51:23:9:14:24 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:21 0/0:49:2:1:1:40:5%:53:2.4684E-1:50:38:23:15:40 0/1:53:18:10:8:50:36%:62:5.8874E-7:52:32:16:16:50 0/0:0:0:0:0:14:0%:25:1E0:46:14:5:9:14 0/0:0:0:0:0:50:0%:92:1E0:52:50:23:27:50 0/0:60:1:0:1:38:2.63%:58:5E-1:41:37:21:16:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:47:0%:89:1E0:47:47:30:17:47 0/0:0:0:0:0:43:0%:82:1E0:47:43:23:20:43 0/0:0:0:0:0:45:0%:85:1E0:51:45:27:18:46 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:40:0%:74:1E0:46:40:23:17:40 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:25:0%:48:1E0:52:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:60:1:0:1:30:3.33%:44:5E-1:47:29:14:15:30 0/0:43:4:3:1:33:12.12%:32:5.6777E-2:47:29:15:14:33 0/1:39:8:5:3:49:16.33%:25:2.8658E-3:42:41:21:20:49 0/1:40:9:5:4:49:18.37%:28:1.3055E-3:44:40:15:25:49 0/0:39:1:1:0:93:1.08%:99:5E-1:44:92:43:49:94 0/0:49:2:2:0:24:8.33%:27:2.4468E-1:42:22:7:15:25 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:46 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:48:0%:89:1E0:45:48:19:29:48 0/0:0:0:0:0:31:0%:59:1E0:49:31:18:13:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:33 0/0:51:3:1:2:27:11.11%:28:1.1792E-1:49:24:15:9:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:11:19:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:14:26:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:27 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:21 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:48:2:2:0:36:5.56%:47:2.4648E-1:43:34:14:20:39 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:44 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:8:24:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:57:0%:99:1E0:43:57:29:28:57 0/0:0:0:0:0:50:0%:92:1E0:43:50:22:28:51 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:52:0%:96:1E0:42:52:30:22:52 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:43 0/0:0:0:0:0:39:0%:74:1E0:39:39:14:25:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:0:0:0:0:46:0%:85:1E0:40:46:15:31:46 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:41 0/0:0:0:0:0:56:0%:99:1E0:40:56:21:35:57 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:45 0/0:0:0:0:0:48:0%:89:1E0:43:48:30:18:48 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:47 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:20:0%:36:1E0:47:20:5:15:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:76:0%:99:1E0:46:76:38:38:78 0/0:0:0:0:0:62:0%:99:1E0:42:62:32:30:62 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:47 MTB_anc 1532855 . C T . PASS AC=3;AF=0.010;AN=300;ANN=T|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.779G>A|p.Ser260Asn|779/1191|779/1191|260/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532855C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532855C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:42:54:30:24:57 0/0:0:0:0:0:20:0%:36:1E0:53:20:9:11:20 0/0:39:1:0:1:57:1.75%:95:5E-1:44:56:28:28:58 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:25 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:53:0%:99:1E0:49:53:21:32:53 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:49:1:1:0:39:2.56%:62:5E-1:49:38:19:19:39 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:28 0/0:0:0:0:0:42:0%:77:1E0:45:42:19:23:42 0/0:0:0:0:0:30:0%:55:1E0:51:30:14:16:30 0/0:0:0:0:0:44:0%:81:1E0:45:44:17:27:46 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:25 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:25 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:20 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:40 0/0:0:0:0:0:53:0%:99:1E0:43:53:30:23:53 0/0:0:0:0:0:53:0%:99:1E0:50:53:28:25:54 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:27:17:44 0/0:38:1:1:0:23:4.35%:34:5E-1:50:22:9:13:23 0/0:39:1:0:1:28:3.57%:41:5E-1:46:27:10:17:31 0/0:39:1:0:1:18:5.56%:24:5E-1:47:17:7:10:18 0/0:0:0:0:0:37:0%:70:1E0:50:37:19:18:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:45:39:24:15:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:49:0%:93:1E0:48:49:28:21:51 0/0:0:0:0:0:25:0%:48:1E0:43:25:5:20:25 0/1:53:13:6:7:56:23.21%:42:5.5625E-5:45:43:21:22:56 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:39 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:39 0/0:0:0:0:0:72:0%:99:1E0:48:72:35:37:75 0/0:0:0:0:0:74:0%:99:1E0:47:74:36:38:74 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:60:1:1:0:30:3.33%:44:5E-1:42:29:7:22:30 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:26 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:34 0/0:60:1:1:0:35:2.86%:55:5E-1:45:34:14:20:36 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:34 0/0:0:0:0:0:47:0%:89:1E0:47:47:25:22:48 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:49 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:16 0/0:60:1:1:0:39:2.56%:62:5E-1:43:38:19:19:40 0/0:0:0:0:0:22:0%:40:1E0:47:22:7:15:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:48:1:0:1:27:3.7%:41:5E-1:42:26:12:14:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:46 0/0:38:1:1:0:36:2.78%:55:5E-1:45:35:17:18:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:59:0%:99:1E0:46:59:24:35:60 0/0:0:0:0:0:36:0%:66:1E0:53:36:13:23:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:39 0/0:0:0:0:0:44:0%:81:1E0:46:44:19:25:45 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:47 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:42 0/0:0:0:0:0:62:0%:99:1E0:49:62:29:33:62 0/0:0:0:0:0:83:0%:99:1E0:46:83:46:37:84 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:50:0%:92:1E0:44:50:20:30:51 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:24 0/0:49:2:1:1:45:4.44%:64:2.4719E-1:48:43:27:16:46 0/0:60:1:1:0:51:1.96%:84:5E-1:51:50:27:23:52 0/0:0:0:0:0:13:0%:25:1E0:46:13:5:8:13 0/0:0:0:0:0:52:0%:96:1E0:51:52:24:28:52 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:40 0/0:39:1:0:1:26:3.85%:38:5E-1:47:25:12:13:26 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:46:0%:85:1E0:43:46:16:30:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:29 0/0:34:1:0:1:31:3.23%:48:5E-1:45:30:14:16:31 0/0:0:0:0:0:51:0%:97:1E0:45:51:29:22:51 0/0:38:1:1:0:46:2.17%:73:5E-1:47:45:25:20:46 0/0:0:0:0:0:49:0%:93:1E0:50:49:28:21:49 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:48:39:20:19:40 0/0:60:1:0:1:32:3.12%:48:5E-1:45:31:18:13:32 0/0:0:0:0:0:24:0%:44:1E0:52:24:16:8:24 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:33:0%:63:1E0:50:33:17:16:33 0/0:60:1:0:1:30:3.33%:44:5E-1:49:29:12:17:31 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/1:42:9:6:3:54:16.67%:28:1.3596E-3:42:45:24:21:54 0/1:41:13:6:7:51:25.49%:42:5.092E-5:43:38:15:23:52 0/0:0:0:0:0:98:0%:99:1E0:43:98:46:52:99 0/0:49:2:2:0:25:8%:31:2.449E-1:43:23:6:17:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:45 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:29 0/0:0:0:0:0:50:0%:92:1E0:45:50:18:32:50 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:31 0/0:52:3:1:2:27:11.11%:28:1.1792E-1:47:24:16:8:27 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:28 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:15:27:43 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:25 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:44 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:37:0%:70:1E0:44:37:11:26:40 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:62:0%:99:1E0:42:62:30:32:62 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:53 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:51:0%:97:1E0:43:51:32:19:53 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:41 0/0:0:0:0:0:38:0%:70:1E0:40:38:14:24:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:30 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:42 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:47 0/0:0:0:0:0:62:0%:99:1E0:40:62:24:38:63 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:47:0%:89:1E0:44:47:29:18:48 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:43 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:41 0/0:0:0:0:0:20:0%:36:1E0:48:20:7:13:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:28 0/0:0:0:0:0:83:0%:99:1E0:45:83:41:42:83 0/0:0:0:0:0:64:0%:99:1E0:42:64:35:29:65 0/0:0:0:0:0:49:0%:93:1E0:43:49:20:29:49 MTB_anc 1532859 . C T . PASS AC=3;AF=0.010;AN=300;ANN=T|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.775G>A|p.Ala259Thr|775/1191|775/1191|259/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532859C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532859C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:57:0%:99:1E0:41:57:32:25:58 0/0:0:0:0:0:19:0%:37:1E0:53:19:9:10:20 0/0:38:1:0:1:57:1.75%:95:5E-1:44:56:27:29:57 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:11:19:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:52:0%:96:1E0:49:52:21:31:52 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:60:1:1:0:38:2.63%:58:5E-1:49:37:19:18:39 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:28 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:44 0/0:0:0:0:0:31:0%:59:1E0:51:31:15:16:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:46 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:20 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:25:14:40 0/0:0:0:0:0:52:0%:96:1E0:42:52:29:23:53 0/0:0:0:0:0:56:0%:99:1E0:49:56:29:27:56 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:35 0/0:0:0:0:0:44:0%:81:1E0:42:44:27:17:44 0/0:37:1:1:0:24:4.17%:34:5E-1:49:23:9:14:24 0/0:38:1:0:1:30:3.33%:44:5E-1:44:29:12:17:31 0/0:39:1:0:1:18:5.56%:24:5E-1:47:17:6:11:18 0/0:0:0:0:0:38:0%:70:1E0:49:38:21:17:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:60:1:0:1:52:1.92%:83:5E-1:47:51:31:20:52 0/0:0:0:0:0:25:0%:48:1E0:42:25:6:19:25 0/1:56:12:6:6:54:22.22%:39:1.23E-4:45:42:21:21:56 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:77:0%:99:1E0:46:77:38:39:77 0/0:0:0:0:0:74:0%:99:1E0:46:74:35:39:75 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:29 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:60:1:1:0:35:2.86%:55:5E-1:44:34:14:20:35 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:45:0%:85:1E0:47:45:24:21:46 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:60:1:1:0:48:2.08%:76:5E-1:44:47:21:26:49 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:17 0/0:58:1:1:0:39:2.56%:62:5E-1:42:38:19:19:39 0/0:0:0:0:0:21:0%:40:1E0:48:21:7:14:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:18:28:46 0/0:38:1:1:0:35:2.86%:55:5E-1:45:34:17:17:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:58:0%:99:1E0:46:58:22:36:58 0/0:0:0:0:0:35:0%:67:1E0:52:35:13:22:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:46 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:33:1:0:1:63:1.59%:99:5E-1:49:62:31:31:64 0/0:0:0:0:0:84:0%:99:1E0:46:84:47:37:85 0/0:60:1:0:1:37:2.7%:59:5E-1:46:36:17:19:38 0/0:0:0:0:0:51:0%:97:1E0:44:51:21:30:52 0/0:0:0:0:0:23:0%:44:1E0:51:23:10:13:24 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:48:2:1:1:44:4.55%:60:2.4706E-1:48:41:25:16:46 0/0:60:1:0:1:53:1.89%:83:5E-1:50:51:28:23:53 0/0:0:0:0:0:14:0%:25:1E0:46:14:5:9:14 0/0:0:0:0:0:52:0%:96:1E0:51:52:24:28:52 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:15:29:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:34:1:0:1:32:3.12%:48:5E-1:44:31:15:16:33 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:52 0/0:38:1:1:0:46:2.17%:73:5E-1:47:45:25:20:46 0/0:0:0:0:0:50:0%:92:1E0:49:50:28:22:50 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:41 0/0:60:1:0:1:33:3.03%:52:5E-1:45:32:19:13:34 0/0:0:0:0:0:23:0%:44:1E0:52:23:16:7:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:33 0/0:60:1:0:1:33:3.03%:52:5E-1:48:32:13:19:33 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/1:43:8:5:3:52:15.38%:25:2.9216E-3:41:44:23:21:52 0/1:41:13:6:7:50:26%:43:4.9906E-5:43:37:15:22:51 0/0:0:0:0:0:99:0%:99:1E0:42:99:46:53:100 0/0:38:1:0:1:26:3.85%:38:5E-1:42:25:9:16:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:46 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:41 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:50:0%:92:1E0:45:50:18:32:51 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:30 0/0:53:3:1:2:25:12%:25:1.1735E-1:48:22:15:7:26 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:29 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:33 0/0:37:1:0:1:41:2.44%:66:5E-1:44:40:16:24:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:28 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:25 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:39:1:0:1:42:2.38%:66:5E-1:41:41:20:21:44 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:12:26:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:62:0%:99:1E0:42:62:31:31:63 0/0:0:0:0:0:54:0%:99:1E0:43:54:26:28:54 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:22 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:50:0%:92:1E0:42:50:30:20:52 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:40 0/0:0:0:0:0:45:0%:85:1E0:39:45:24:21:45 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:31 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:48 0/0:0:0:0:0:60:0%:99:1E0:39:60:23:37:63 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:44 0/0:0:0:0:0:51:0%:97:1E0:43:51:32:19:52 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:44 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:43 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:82:0%:99:1E0:44:82:41:41:84 0/0:0:0:0:0:63:0%:99:1E0:41:63:35:28:66 0/0:0:0:0:0:50:0%:92:1E0:41:50:21:29:50 MTB_anc 1532874 . A T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.760T>A|p.Ser254Thr|760/1191|760/1191|254/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532874A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532874A>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:53 0/0:0:0:0:0:21:0%:40:1E0:50:21:11:10:21 0/0:31:1:1:0:58:1.72%:95:5E-1:45:56:28:28:60 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:51:0%:97:1E0:49:51:21:30:51 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:27 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:60:1:1:0:38:2.63%:58:5E-1:48:37:17:20:38 0/0:0:0:0:0:30:0%:55:1E0:49:30:11:19:32 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:29:0%:55:1E0:50:29:13:16:31 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:45 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:27 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:24 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:20 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:39 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:50 0/0:0:0:0:0:55:0%:99:1E0:48:55:30:25:55 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:41 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:25 0/0:32:1:0:1:29:3.45%:45:5E-1:42:28:11:17:34 0/0:0:0:0:0:17:0%:33:1E0:49:17:6:11:18 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:32 0/0:0:0:0:0:59:0%:99:1E0:47:59:34:25:60 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:26 0/0:0:0:0:0:60:0%:99:1E0:47:60:30:30:60 0/0:0:0:0:0:38:0%:70:1E0:47:38:18:20:38 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:38 0/0:0:0:0:0:81:0%:99:1E0:47:81:41:40:84 0/0:0:0:0:0:72:0%:99:1E0:47:72:35:37:75 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:7:20:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:28 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:44:0%:81:1E0:49:44:23:21:47 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:45 0/0:0:0:0:0:49:0%:93:1E0:46:49:22:27:51 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:22:0%:40:1E0:47:22:6:16:22 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:42:0%:77:1E0:46:42:16:26:44 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:29 0/0:0:0:0:0:56:0%:99:1E0:48:56:21:35:58 0/0:0:0:0:0:33:0%:63:1E0:52:33:12:21:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:36 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:45 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:45 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:42 0/0:0:0:0:0:59:0%:99:1E0:47:59:27:32:62 0/0:0:0:0:0:79:0%:99:1E0:47:79:45:34:82 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:40 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:50 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:27 0/0:60:1:0:1:49:2.04%:80:5E-1:49:48:30:18:50 0/0:0:0:0:0:53:0%:99:1E0:49:53:29:24:53 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:16 0/0:0:0:0:0:54:0%:99:1E0:50:54:26:28:54 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:41 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:48:0%:89:1E0:44:48:16:32:50 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:52:0%:96:1E0:44:52:27:25:52 0/0:36:1:1:0:45:2.22%:73:5E-1:49:44:24:20:46 0/0:0:0:0:0:47:0%:89:1E0:50:47:27:20:47 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:34 0/0:0:0:0:0:23:0%:44:1E0:55:23:15:8:23 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:60:1:0:1:30:3.33%:44:5E-1:48:29:10:19:32 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/1:48:8:5:3:51:15.69%:25:2.9037E-3:39:43:22:21:54 0/1:44:13:6:7:49:26.53%:43:4.8866E-5:46:36:14:22:52 0/0:0:0:0:0:104:0%:99:1E0:42:104:49:55:104 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:27 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:45 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:46:0%:85:1E0:44:46:14:32:49 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:26 0/0:53:3:1:2:24:12.5%:22:1.1702E-1:46:21:14:7:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:12:21:33 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:34 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:26 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:43 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:0:0:0:0:58:0%:99:1E0:43:58:29:29:61 0/0:0:0:0:0:51:0%:97:1E0:42:51:22:29:53 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:52 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:41 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:44 0/0:0:0:0:0:38:0%:70:1E0:38:38:14:24:40 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:31 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:37 0/0:32:1:1:0:47:2.13%:77:5E-1:39:46:24:22:47 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:30 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:45 0/0:0:0:0:0:65:0%:99:1E0:39:65:24:41:68 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:49 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:47 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:42 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:85:0%:99:1E0:43:85:41:44:88 0/0:0:0:0:0:69:0%:99:1E0:41:69:39:30:70 0/0:0:0:0:0:49:0%:93:1E0:42:49:19:30:51 MTB_anc 1532876 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.758A>G|p.Asn253Ser|758/1191|758/1191|253/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532876T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532876T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:45:52:29:23:52 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:21 0/0:38:1:0:1:58:1.72%:94:5E-1:45:57:29:28:60 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:49:0%:93:1E0:51:49:20:29:51 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:37 0/0:60:1:1:0:38:2.63%:58:5E-1:48:37:17:20:38 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:32 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:42 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:20:26:46 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:24 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:39 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:51 0/0:0:0:0:0:55:0%:99:1E0:49:55:30:25:55 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:40 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:18:0%:32:1E0:49:18:7:11:18 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:59:0%:99:1E0:47:59:35:24:60 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:26 0/0:0:0:0:0:61:0%:99:1E0:47:61:30:31:61 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:38 0/0:0:0:0:0:84:0%:99:1E0:46:84:43:41:85 0/0:0:0:0:0:74:0%:99:1E0:48:74:36:38:75 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:7:22:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:36 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:33 0/0:0:0:0:0:47:0%:89:1E0:48:47:25:22:48 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:44 0/0:0:0:0:0:52:0%:96:1E0:46:52:25:27:52 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:22:0%:40:1E0:49:22:6:16:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:42:0%:77:1E0:47:42:16:26:44 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:29 0/0:0:0:0:0:58:0%:99:1E0:48:58:22:36:58 0/0:0:0:0:0:34:0%:62:1E0:52:34:13:21:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:44:0%:81:1E0:47:44:17:27:45 0/0:38:1:0:1:44:2.27%:69:5E-1:41:43:21:22:44 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:43 0/0:0:0:0:0:63:0%:99:1E0:48:63:29:34:63 0/0:0:0:0:0:81:0%:99:1E0:47:81:47:34:82 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:40 0/0:0:0:0:0:50:0%:92:1E0:45:50:22:28:50 0/0:0:0:0:0:24:0%:44:1E0:51:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:49:26:17:9:27 0/0:60:1:0:1:50:2%:80:5E-1:49:49:30:19:50 0/0:0:0:0:0:53:0%:99:1E0:51:53:29:24:53 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 0/0:0:0:0:0:54:0%:99:1E0:51:54:26:28:54 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:36:0%:66:1E0:49:36:19:17:36 0/0:0:0:0:0:49:0%:93:1E0:44:49:15:34:50 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:52:0%:96:1E0:43:52:28:24:53 0/0:38:1:1:0:47:2.13%:77:5E-1:48:46:26:20:47 0/0:0:0:0:0:47:0%:89:1E0:50:47:27:20:47 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:41:0%:78:1E0:48:41:23:18:41 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:23:0%:44:1E0:54:23:15:8:23 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:60:1:0:1:33:3.03%:52:5E-1:47:32:12:20:33 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/1:48:8:5:3:51:15.69%:25:2.9037E-3:40:43:23:20:53 0/1:44:13:6:7:50:26%:43:4.9906E-5:46:37:15:22:51 0/0:0:0:0:0:103:0%:99:1E0:43:103:50:53:104 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:41 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:16:32:48 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:52:3:1:2:24:12.5%:22:1.1702E-1:46:21:14:7:24 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:49:30:12:18:32 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:29 0/0:0:0:0:0:60:0%:99:1E0:43:60:30:30:62 0/0:0:0:0:0:53:0%:99:1E0:43:53:24:29:54 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:52:0%:96:1E0:41:52:32:20:52 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:39:0%:74:1E0:37:39:14:25:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:47 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:45 0/0:0:0:0:0:68:0%:99:1E0:39:68:26:42:68 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:48 0/0:0:0:0:0:46:0%:85:1E0:41:46:20:26:47 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:43 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:88:0%:99:1E0:43:88:42:46:89 0/0:0:0:0:0:70:0%:99:1E0:41:70:40:30:70 0/0:0:0:0:0:48:0%:89:1E0:43:48:18:30:51 MTB_anc 1532877 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.757A>G|p.Asn253Asp|757/1191|757/1191|253/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532877T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532877T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:45:51:29:22:51 0/0:0:0:0:0:19:0%:37:1E0:52:19:10:9:20 0/0:39:1:0:1:61:1.64%:99:5E-1:45:60:29:31:61 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:51:0%:97:1E0:50:51:21:30:51 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:60:1:1:0:38:2.63%:58:5E-1:49:37:17:20:38 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:32 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:42 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:20:26:46 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:39 0/0:0:0:0:0:51:0%:97:1E0:43:51:28:23:51 0/0:0:0:0:0:55:0%:99:1E0:49:55:30:25:55 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:40 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:18:0%:32:1E0:50:18:7:11:18 0/0:0:0:0:0:39:0%:74:1E0:48:39:22:17:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:61:0%:99:1E0:47:61:35:26:61 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:60:1:1:0:61:1.64%:99:5E-1:47:60:29:31:61 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:83:0%:99:1E0:46:83:43:40:84 0/0:0:0:0:0:73:0%:99:1E0:48:73:36:37:75 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:8:22:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:34 0/0:0:0:0:0:47:0%:89:1E0:48:47:25:22:48 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:43 0/0:0:0:0:0:51:0%:97:1E0:46:51:25:26:51 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:22:0%:40:1E0:49:22:6:16:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:44 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:57:0%:99:1E0:48:57:22:35:58 0/0:0:0:0:0:35:0%:67:1E0:51:35:13:22:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:44:0%:81:1E0:47:44:18:26:45 0/0:39:1:0:1:43:2.33%:70:5E-1:42:42:21:21:44 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:63:0%:99:1E0:48:63:28:35:63 0/0:0:0:0:0:82:0%:99:1E0:47:82:47:35:82 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:41 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:51 0/0:0:0:0:0:24:0%:44:1E0:51:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:50:26:17:9:27 0/0:60:1:0:1:49:2.04%:80:5E-1:49:48:29:19:50 0/0:0:0:0:0:53:0%:99:1E0:51:53:29:24:53 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:17 0/0:0:0:0:0:54:0%:99:1E0:51:54:26:28:54 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:40 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:49:0%:93:1E0:44:49:16:33:50 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:52:0%:96:1E0:44:52:27:25:53 0/0:39:1:1:0:47:2.13%:77:5E-1:49:46:26:20:47 0/0:0:0:0:0:46:0%:85:1E0:51:46:27:19:46 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:23:0%:44:1E0:55:23:15:8:23 0/0:0:0:0:0:33:0%:63:1E0:49:33:14:19:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:60:1:0:1:33:3.03%:52:5E-1:48:32:12:20:33 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/1:47:8:5:3:53:15.09%:25:2.9389E-3:40:45:24:21:53 0/1:44:13:6:7:51:25.49%:42:5.092E-5:46:38:16:22:51 0/0:0:0:0:0:101:0%:99:1E0:43:101:49:52:104 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:48:0%:89:1E0:45:48:16:32:48 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:26 0/0:52:3:1:2:24:12.5%:22:1.1702E-1:47:21:14:7:24 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:49:31:12:19:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:14:22:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:60:0%:99:1E0:44:60:30:30:62 0/0:0:0:0:0:55:0%:99:1E0:43:55:26:29:55 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:51:0%:97:1E0:42:51:32:19:52 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:44 0/0:0:0:0:0:38:0%:70:1E0:38:38:14:24:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:47 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:45 0/0:0:0:0:0:68:0%:99:1E0:39:68:26:42:69 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:48 0/0:0:0:0:0:46:0%:85:1E0:42:46:19:27:47 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:43 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:88:0%:99:1E0:43:88:42:46:88 0/0:0:0:0:0:69:0%:99:1E0:41:69:40:29:70 0/0:0:0:0:0:50:0%:92:1E0:42:50:20:30:50 MTB_anc 1532878 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.756C>G|p.Thr252Thr|756/1191|756/1191|252/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532878G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532878G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:45:51:29:22:51 0/0:0:0:0:0:19:0%:37:1E0:52:19:10:9:20 0/0:39:1:0:1:60:1.67%:98:5E-1:45:59:28:31:60 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:50:0%:92:1E0:51:50:20:30:50 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:60:1:1:0:38:2.63%:58:5E-1:49:37:17:20:38 0/0:37:1:1:0:32:3.12%:48:5E-1:48:31:12:19:32 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:41 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:20:26:46 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:18 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:39 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:51 0/0:0:0:0:0:55:0%:99:1E0:49:55:30:25:55 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:40 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:18:0%:32:1E0:50:18:7:11:18 0/0:0:0:0:0:39:0%:74:1E0:48:39:22:17:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:32 0/0:0:0:0:0:58:0%:99:1E0:47:58:33:25:59 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:60:0%:99:1E0:48:60:30:30:61 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:38 0/0:0:0:0:0:84:0%:99:1E0:47:84:44:40:84 0/0:0:0:0:0:73:0%:99:1E0:49:73:36:37:75 0/0:0:0:0:0:44:0%:81:1E0:46:44:24:20:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:8:22:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:34 0/0:0:0:0:0:47:0%:89:1E0:48:47:25:22:48 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:43 0/0:0:0:0:0:51:0%:97:1E0:46:51:25:26:51 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:21:0%:40:1E0:49:21:6:15:21 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:44 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:35 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:29 0/0:0:0:0:0:58:0%:99:1E0:48:58:22:36:58 0/0:0:0:0:0:35:0%:67:1E0:52:35:13:22:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:42:0%:77:1E0:48:42:17:25:43 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:62:0%:99:1E0:48:62:28:34:62 0/0:0:0:0:0:82:0%:99:1E0:48:82:47:35:82 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:51 0/0:20:1:1:0:23:4.35%:31:5E-1:52:21:8:13:24 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 0/0:60:1:0:1:51:1.96%:84:5E-1:49:50:30:20:51 0/0:0:0:0:0:53:0%:99:1E0:51:53:29:24:53 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:18 0/0:0:0:0:0:53:0%:99:1E0:51:53:25:28:54 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:36:0%:66:1E0:49:36:19:17:36 0/0:0:0:0:0:49:0%:93:1E0:45:49:16:33:50 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:53:0%:99:1E0:44:53:28:25:53 0/0:39:1:1:0:45:2.22%:73:5E-1:49:44:26:18:46 0/0:0:0:0:0:45:0%:85:1E0:50:45:26:19:45 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:41 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:24:0%:44:1E0:53:24:16:8:24 0/0:0:0:0:0:33:0%:63:1E0:49:33:14:19:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:30 0/0:60:1:0:1:33:3.03%:52:5E-1:48:32:12:20:33 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/1:49:8:5:3:53:15.09%:25:2.9389E-3:41:45:24:21:54 0/1:44:13:6:7:50:26%:43:4.9906E-5:47:37:15:22:51 0/0:0:0:0:0:103:0%:99:1E0:43:103:50:53:103 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:28 0/0:0:0:0:0:47:0%:89:1E0:45:47:16:31:48 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 0/0:53:3:1:2:23:13.04%:22:1.1667E-1:47:20:13:7:24 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:32:0%:59:1E0:49:32:12:20:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:14:22:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:43 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:38 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:62:0%:99:1E0:44:62:31:31:62 0/0:0:0:0:0:55:0%:99:1E0:42:55:26:29:55 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:52:0%:96:1E0:42:52:32:20:52 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:39 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:43:0%:82:1E0:40:43:23:20:47 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:45 0/0:38:1:1:0:68:1.47%:99:5E-1:40:67:25:42:69 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:43 0/0:0:0:0:0:48:0%:89:1E0:45:48:29:19:48 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:47 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:88:0%:99:1E0:44:88:43:45:88 0/0:0:0:0:0:70:0%:99:1E0:41:70:40:30:70 0/0:0:0:0:0:48:0%:89:1E0:43:48:18:30:49 MTB_anc 1532879 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.755C>T|p.Thr252Ile|755/1191|755/1191|252/396||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532879G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532879G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:45:50:29:21:51 0/0:0:0:0:0:20:0%:36:1E0:52:20:10:10:20 0/0:39:1:0:1:59:1.69%:98:5E-1:46:58:28:30:60 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:50:0%:92:1E0:51:50:20:30:50 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:60:1:1:0:39:2.56%:62:5E-1:48:38:18:20:39 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:32 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:46 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:33 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:40 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:51 0/0:0:0:0:0:56:0%:99:1E0:48:56:31:25:56 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:26:15:41 0/0:0:0:0:0:23:0%:44:1E0:48:23:9:14:23 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:18:0%:32:1E0:49:18:7:11:18 0/0:0:0:0:0:38:0%:70:1E0:48:38:22:16:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:57:0%:99:1E0:47:57:32:25:58 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:60:0%:99:1E0:48:60:30:30:61 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:37 0/0:0:0:0:0:84:0%:99:1E0:47:84:43:41:85 0/0:0:0:0:0:74:0%:99:1E0:49:74:36:38:75 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:7:21:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:47:0%:89:1E0:48:47:25:22:49 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:43 0/0:0:0:0:0:50:0%:92:1E0:46:50:24:26:50 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:21:0%:40:1E0:49:21:6:15:21 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:44 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:55:0%:99:1E0:48:55:20:35:58 0/0:0:0:0:0:35:0%:67:1E0:52:35:13:22:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:43:0%:82:1E0:48:43:17:26:43 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:44 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:63:0%:99:1E0:48:63:29:34:63 0/0:0:0:0:0:81:0%:99:1E0:48:81:46:35:82 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:42 0/0:0:0:0:0:51:0%:97:1E0:45:51:24:27:52 0/0:0:0:0:0:24:0%:44:1E0:51:24:10:14:24 0/0:0:0:0:0:25:0%:48:1E0:50:25:15:10:25 0/0:60:1:0:1:49:2.04%:80:5E-1:49:48:29:19:51 0/0:0:0:0:0:52:0%:96:1E0:50:52:28:24:52 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:18 0/0:0:0:0:0:53:0%:99:1E0:51:53:25:28:53 0/0:37:1:0:1:38:2.63%:58:5E-1:42:37:20:17:40 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:36:0%:66:1E0:49:36:19:17:36 0/0:0:0:0:0:48:0%:89:1E0:45:48:15:33:50 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:52:0%:96:1E0:44:52:28:24:53 0/0:39:1:1:0:45:2.22%:73:5E-1:49:44:25:19:46 0/0:0:0:0:0:45:0%:85:1E0:50:45:26:19:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:41:0%:78:1E0:48:41:23:18:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:25:0%:48:1E0:51:25:16:9:25 0/0:0:0:0:0:33:0%:63:1E0:50:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:29 0/0:60:1:0:1:32:3.12%:48:5E-1:48:31:12:19:32 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/1:48:8:5:3:55:14.55%:25:2.9718E-3:40:47:26:21:55 0/1:45:13:6:7:50:26%:43:4.9906E-5:47:37:15:22:51 0/0:0:0:0:0:101:0%:99:1E0:44:101:48:53:102 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:28 0/0:0:0:0:0:48:0%:89:1E0:45:48:16:32:48 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:26 0/0:52:3:1:2:24:12.5%:22:1.1702E-1:47:21:14:7:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:48:32:12:20:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:14:22:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:44 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:29 0/0:0:0:0:0:61:0%:99:1E0:43:61:30:31:61 0/0:0:0:0:0:54:0%:99:1E0:43:54:26:28:54 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:50:0%:92:1E0:43:50:30:20:52 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:44 0/0:0:0:0:0:37:0%:70:1E0:39:37:13:24:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:38 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:48 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:29 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:45 0/0:0:0:0:0:66:0%:99:1E0:40:66:25:41:69 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:47:0%:89:1E0:45:47:28:19:48 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:47 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:86:0%:99:1E0:44:86:42:44:88 0/0:0:0:0:0:70:0%:99:1E0:42:70:40:30:70 0/0:0:0:0:0:49:0%:93:1E0:43:49:19:30:49 MTB_anc 1532889 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.745G>A|p.Val249Met|745/1191|745/1191|249/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532889C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532889C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:46:50:29:21:51 0/0:0:0:0:0:18:0%:32:1E0:52:18:9:9:19 0/0:38:1:0:1:61:1.64%:99:5E-1:45:60:27:33:61 0/0:60:1:0:1:24:4.17%:34:5E-1:48:23:13:10:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:52:0%:96:1E0:51:52:19:33:52 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:60:1:1:0:40:2.5%:62:5E-1:49:39:18:21:40 0/0:60:1:0:1:31:3.23%:48:5E-1:47:30:13:17:31 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:39 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:34 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:26:13:39 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:51 0/0:0:0:0:0:55:0%:99:1E0:47:55:30:25:55 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:23 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:34 0/0:33:1:0:1:17:5.88%:24:5E-1:49:16:7:9:17 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:58:0%:99:1E0:47:58:33:25:59 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:60:0%:99:1E0:47:60:30:30:60 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:82:0%:99:1E0:47:82:44:38:83 0/0:0:0:0:0:77:0%:99:1E0:48:77:35:42:80 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:43 0/0:39:1:0:1:39:2.56%:62:5E-1:43:38:20:18:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:6:22:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:37:1:1:0:32:3.12%:48:5E-1:47:31:17:14:32 0/0:0:0:0:0:47:0%:89:1E0:48:47:26:21:48 0/0:60:1:1:0:44:2.27%:69:5E-1:45:43:20:23:44 0/0:0:0:0:0:51:0%:97:1E0:46:51:25:26:51 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:21:0%:40:1E0:48:21:5:16:21 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:43:0%:82:1E0:46:43:17:26:43 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:57:0%:99:1E0:46:57:21:36:57 0/0:0:0:0:0:36:0%:66:1E0:52:36:14:22:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:41:0%:78:1E0:47:41:16:25:41 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:43 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:0:0:0:0:62:0%:99:1E0:47:62:29:33:63 0/0:0:0:0:0:79:0%:99:1E0:47:79:45:34:81 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:50:0%:92:1E0:46:50:23:27:50 0/0:0:0:0:0:23:0%:44:1E0:50:23:10:13:24 0/0:0:0:0:0:26:0%:47:1E0:49:26:16:10:26 0/0:60:1:0:1:52:1.92%:83:5E-1:48:51:30:21:52 0/0:0:0:0:0:51:0%:97:1E0:50:51:29:22:51 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:51:0%:97:1E0:50:51:25:26:51 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:16:35:51 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:34 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:49 0/0:60:1:1:0:43:2.33%:70:5E-1:49:42:23:19:43 0/0:0:0:0:0:47:0%:89:1E0:48:47:27:20:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:33 0/0:0:0:0:0:26:0%:47:1E0:50:26:16:10:26 0/0:0:0:0:0:33:0%:63:1E0:50:33:14:19:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:60:1:0:1:35:2.86%:55:5E-1:47:34:14:20:35 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:31 0/1:46:10:7:3:55:18.18%:32:6.2367E-4:40:45:26:19:58 0/1:44:13:6:7:53:24.53%:42:5.2873E-5:45:40:16:24:53 0/0:0:0:0:0:100:0%:99:1E0:43:100:49:51:102 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:17:30:47 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:33:1:0:1:34:2.94%:51:5E-1:42:33:17:16:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:59:0%:99:1E0:43:59:30:29:59 0/0:0:0:0:0:55:0%:99:1E0:42:55:26:29:56 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:53:0%:99:1E0:40:53:32:21:55 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:44 0/0:0:0:0:0:38:0%:70:1E0:38:38:14:24:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:46 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:45 0/0:0:0:0:0:67:0%:99:1E0:39:67:25:42:68 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:48 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:41 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:41 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:87:0%:99:1E0:43:87:43:44:87 0/0:0:0:0:0:69:0%:99:1E0:42:69:40:29:69 0/0:0:0:0:0:47:0%:89:1E0:42:47:19:28:48 MTB_anc 1532900 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.734T>C|p.Leu245Pro|734/1191|734/1191|245/396||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532900A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532900A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:46:51:31:20:51 0/0:0:0:0:0:19:0%:37:1E0:52:19:11:8:19 0/0:39:1:0:1:58:1.72%:94:5E-1:45:57:26:31:60 0/0:0:0:0:0:24:0%:44:1E0:52:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:55:0%:99:1E0:51:55:20:35:56 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:38:0%:70:1E0:48:38:17:21:39 0/0:60:1:1:0:41:2.44%:66:5E-1:48:40:18:22:41 0/0:60:1:0:1:28:3.57%:41:5E-1:47:27:12:15:31 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:42 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:48 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:38 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:51 0/0:0:0:0:0:49:0%:93:1E0:48:49:26:23:52 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:40 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:32 0/0:0:0:0:0:15:0%:29:1E0:50:15:6:9:15 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:59:0%:99:1E0:48:59:33:26:60 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:61:0%:99:1E0:47:61:31:30:61 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:81:0%:99:1E0:49:81:45:36:82 0/0:0:0:0:0:77:0%:99:1E0:48:77:34:43:79 0/0:0:0:0:0:45:0%:85:1E0:48:45:24:21:45 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:7:21:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:60:1:1:0:32:3.12%:48:5E-1:46:31:20:11:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:37:1:1:0:32:3.12%:48:5E-1:47:31:17:14:32 0/0:0:0:0:0:46:0%:85:1E0:49:46:25:21:48 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:49:0%:93:1E0:48:49:23:26:50 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:24:0%:44:1E0:47:24:6:18:24 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:45:0%:85:1E0:46:45:17:28:47 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:56:0%:99:1E0:48:56:21:35:56 0/0:0:0:0:0:36:0%:66:1E0:51:36:15:21:36 0/0:39:1:1:0:32:3.12%:48:5E-1:43:31:14:17:33 0/0:0:0:0:0:41:0%:78:1E0:47:41:17:24:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:43 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:40 0/0:0:0:0:0:63:0%:99:1E0:47:63:28:35:64 0/0:0:0:0:0:79:0%:99:1E0:48:79:44:35:80 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:52:0%:96:1E0:45:52:23:29:53 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:60:1:0:1:52:1.92%:83:5E-1:49:51:29:22:52 0/0:0:0:0:0:48:0%:89:1E0:49:48:29:19:50 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:52:0%:96:1E0:49:52:25:27:52 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:49:0%:93:1E0:43:49:16:33:51 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:33 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:50 0/0:60:1:1:0:40:2.5%:62:5E-1:50:39:21:18:41 0/0:0:0:0:0:51:0%:97:1E0:48:51:27:24:51 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:43 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:22:0%:40:1E0:50:22:15:7:23 0/0:0:0:0:0:35:0%:67:1E0:49:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:60:1:0:1:37:2.7%:59:5E-1:47:36:16:20:37 0/0:0:0:0:0:31:0%:59:1E0:50:31:18:13:32 0/0:0:0:0:0:56:0%:99:1E0:40:56:35:21:57 0/1:45:13:6:7:52:25%:42:5.1909E-5:46:39:15:24:54 0/0:0:0:0:0:99:0%:99:1E0:43:99:47:52:100 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:44 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:43 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:30 0/0:0:0:0:0:46:0%:85:1E0:45:46:18:28:46 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:38 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:30 0/0:0:0:0:0:57:0%:99:1E0:43:57:29:28:57 0/0:0:0:0:0:57:0%:99:1E0:42:57:28:29:57 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:53:0%:99:1E0:41:53:33:20:55 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:38 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:45 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:45 0/0:0:0:0:0:65:0%:99:1E0:39:65:25:40:69 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:44 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:46 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:49 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:41 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:86:0%:99:1E0:44:86:44:42:87 0/0:0:0:0:0:64:0%:99:1E0:43:64:39:25:68 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:48 MTB_anc 1532901 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.733C>G|p.Leu245Val|733/1191|733/1191|245/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532901G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532901G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:46:51:31:20:51 0/0:0:0:0:0:18:0%:32:1E0:53:18:11:7:19 0/0:39:1:0:1:60:1.67%:98:5E-1:45:59:26:33:60 0/0:0:0:0:0:23:0%:44:1E0:53:23:12:11:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:33 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:56:0%:99:1E0:51:56:21:35:56 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:40 0/0:60:1:1:0:41:2.44%:66:5E-1:48:40:18:22:41 0/0:60:1:0:1:29:3.45%:45:5E-1:47:28:12:16:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:48:0%:89:1E0:44:48:21:27:48 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:17 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:39 0/0:35:1:1:0:49:2.04%:80:5E-1:44:48:25:23:50 0/0:0:0:0:0:52:0%:96:1E0:48:52:28:24:52 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:15:0%:29:1E0:49:15:6:9:15 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:36 0/0:0:0:0:0:60:0%:99:1E0:48:60:33:27:60 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:61:0%:99:1E0:47:61:31:30:61 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:79:0%:99:1E0:49:79:45:34:81 0/0:0:0:0:0:78:0%:99:1E0:49:78:35:43:79 0/0:0:0:0:0:45:0%:85:1E0:48:45:24:21:45 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:7:21:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:60:1:1:0:32:3.12%:48:5E-1:46:31:20:11:32 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:37 0/0:37:1:1:0:32:3.12%:48:5E-1:46:31:17:14:32 0/0:0:0:0:0:47:0%:89:1E0:48:47:26:21:48 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:41 0/0:0:0:0:0:49:0%:93:1E0:47:49:24:25:50 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:24:0%:44:1E0:47:24:6:18:24 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:46:0%:85:1E0:46:46:18:28:47 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:29 0/0:0:0:0:0:55:0%:99:1E0:47:55:21:34:56 0/0:0:0:0:0:36:0%:66:1E0:52:36:15:21:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:41:0%:78:1E0:47:41:17:24:41 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:43 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:40 0/0:0:0:0:0:64:0%:99:1E0:47:64:29:35:64 0/0:0:0:0:0:79:0%:99:1E0:48:79:44:35:80 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:53:0%:99:1E0:45:53:24:29:53 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:60:1:0:1:50:2%:80:5E-1:48:49:28:21:50 0/0:0:0:0:0:50:0%:92:1E0:49:50:29:21:50 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:52:0%:96:1E0:49:52:25:27:52 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:50:0%:92:1E0:43:50:16:34:51 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:33 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:50 0/0:60:1:1:0:40:2.5%:62:5E-1:50:39:22:17:40 0/0:0:0:0:0:50:0%:92:1E0:48:50:26:24:50 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:22:0%:40:1E0:50:22:15:7:23 0/0:37:1:0:1:35:2.86%:55:5E-1:49:34:15:19:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:60:1:0:1:37:2.7%:59:5E-1:47:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:56:0%:99:1E0:42:56:35:21:57 0/1:48:13:6:7:55:23.64%:42:5.473E-5:45:42:18:24:55 0/0:0:0:0:0:99:0%:99:1E0:43:99:46:53:99 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:17:26:43 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:46:0%:85:1E0:44:46:18:28:47 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 0/0:0:0:0:0:57:0%:99:1E0:43:57:30:27:57 0/0:0:0:0:0:57:0%:99:1E0:42:57:28:29:57 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:51:0%:97:1E0:41:51:31:20:55 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:43 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:38 0/0:60:1:1:0:33:3.03%:52:5E-1:46:32:15:17:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:44 0/0:0:0:0:0:68:0%:99:1E0:38:68:27:41:69 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:45 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:46 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:49 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:41 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:85:0%:99:1E0:44:85:44:41:86 0/0:0:0:0:0:69:0%:99:1E0:42:69:42:27:69 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:48 MTB_anc 1532902 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.732G>A|p.Met244Ile|732/1191|732/1191|244/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532902C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532902C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:46:48:29:19:50 0/0:0:0:0:0:17:0%:33:1E0:53:17:10:7:19 0/0:39:1:0:1:60:1.67%:98:5E-1:45:59:26:33:60 0/0:0:0:0:0:23:0%:44:1E0:53:23:12:11:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:55:0%:99:1E0:51:55:20:35:55 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:41 0/0:60:1:1:0:42:2.38%:66:5E-1:48:41:19:22:42 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:42 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:49 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:37 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:22 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:17 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:39 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:50 0/0:0:0:0:0:50:0%:92:1E0:48:50:28:22:51 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:15:0%:29:1E0:50:15:6:9:15 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:60:0%:99:1E0:48:60:33:27:60 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:60:0%:99:1E0:47:60:31:29:61 0/0:0:0:0:0:40:0%:74:1E0:48:40:20:20:40 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:38 0/0:0:0:0:0:80:0%:99:1E0:49:80:46:34:81 0/0:0:0:0:0:77:0%:99:1E0:49:77:35:42:79 0/0:0:0:0:0:44:0%:81:1E0:48:44:23:21:45 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:8:21:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:32 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:47:0%:89:1E0:48:47:26:21:48 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:41 0/0:0:0:0:0:50:0%:92:1E0:48:50:24:26:50 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:23:0%:44:1E0:48:23:6:17:23 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:45:0%:85:1E0:47:45:18:27:47 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:55:0%:99:1E0:47:55:20:35:56 0/0:0:0:0:0:35:0%:67:1E0:52:35:14:21:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:41:0%:78:1E0:47:41:17:24:41 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:41 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:65:0%:99:1E0:47:65:29:36:65 0/0:0:0:0:0:79:0%:99:1E0:48:79:43:36:79 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:52:0%:96:1E0:46:52:23:29:53 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:49:26:17:9:27 0/0:60:1:0:1:50:2%:80:5E-1:48:49:28:21:51 0/0:0:0:0:0:49:0%:93:1E0:49:49:28:21:49 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:52:0%:96:1E0:49:52:25:27:52 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:50:0%:92:1E0:43:50:16:34:51 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:22 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:32 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:50 0/0:60:1:1:0:40:2.5%:62:5E-1:51:39:22:17:40 0/0:0:0:0:0:50:0%:92:1E0:48:50:26:24:50 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:22:0%:40:1E0:51:22:14:8:23 0/0:0:0:0:0:35:0%:67:1E0:50:35:15:20:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:60:1:0:1:37:2.7%:59:5E-1:47:36:16:20:37 0/0:0:0:0:0:30:0%:55:1E0:51:30:17:13:30 0/0:0:0:0:0:54:0%:99:1E0:43:54:33:21:56 0/1:48:13:6:7:55:23.64%:42:5.473E-5:46:42:18:24:55 0/0:0:0:0:0:99:0%:99:1E0:43:99:46:53:99 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:43 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:18:28:47 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:32 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:38 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:57 0/0:0:0:0:0:57:0%:99:1E0:43:57:28:29:57 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:54:0%:99:1E0:41:54:34:20:55 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:42 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:38 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:40 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:45 0/0:0:0:0:0:69:0%:99:1E0:39:69:27:42:69 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:45 0/0:0:0:0:0:46:0%:85:1E0:46:46:27:19:46 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:49 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:86:0%:99:1E0:43:86:45:41:86 0/0:0:0:0:0:67:0%:99:1E0:43:67:41:26:68 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:48 MTB_anc 1532908 . C A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.726G>T|p.Val242Val|726/1191|726/1191|242/396||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532908C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532908C>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:45:49:29:20:50 0/0:0:0:0:0:18:0%:32:1E0:50:18:11:7:19 0/0:39:1:0:1:60:1.67%:98:5E-1:44:59:26:33:60 0/0:0:0:0:0:25:0%:48:1E0:51:25:14:11:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:54:0%:99:1E0:50:54:20:34:54 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:42 0/0:60:1:1:0:40:2.5%:62:5E-1:48:39:19:20:40 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:36 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:49 0/0:0:0:0:0:53:0%:99:1E0:48:53:29:24:54 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:40 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:16:0%:29:1E0:48:16:6:10:16 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:39:1:0:1:60:1.67%:98:5E-1:48:59:34:25:60 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:62:0%:99:1E0:46:62:33:29:62 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:41 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:78:0%:99:1E0:48:78:44:34:80 0/0:0:0:0:0:78:0%:99:1E0:49:78:36:42:80 0/0:0:0:0:0:44:0%:81:1E0:47:44:24:20:45 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:7:21:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:45:0%:85:1E0:48:45:26:19:46 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:40 0/0:0:0:0:0:48:0%:89:1E0:48:48:24:24:48 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:23:0%:40:1E0:48:22:6:16:23 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:47:0%:89:1E0:45:47:18:29:47 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:55:0%:99:1E0:47:55:21:34:55 0/0:0:0:0:0:33:0%:63:1E0:53:33:12:21:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:40:0%:74:1E0:47:40:16:24:41 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:62:0%:99:1E0:47:62:27:35:63 0/0:0:0:0:0:81:0%:99:1E0:47:81:45:36:82 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:55:0%:99:1E0:44:55:26:29:55 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:21 0/0:0:0:0:0:28:0%:51:1E0:48:28:18:10:29 0/0:60:1:0:1:50:2%:80:5E-1:48:49:28:21:50 0/0:0:0:0:0:49:0%:93:1E0:49:49:28:21:49 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:54:0%:99:1E0:48:54:26:28:54 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:48:0%:89:1E0:44:48:16:32:49 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:48 0/0:60:1:1:0:41:2.44%:66:5E-1:50:40:22:18:41 0/0:0:0:0:0:50:0%:92:1E0:49:50:25:25:50 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:23 0/0:0:0:0:0:35:0%:67:1E0:50:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:36 0/0:60:1:0:1:38:2.63%:58:5E-1:47:37:16:21:38 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:28 0/0:0:0:0:0:53:0%:99:1E0:41:53:33:20:54 0/1:47:13:6:7:54:24.07%:42:5.3813E-5:46:41:17:24:55 0/0:0:0:0:0:99:0%:99:1E0:43:99:45:54:99 0/0:60:1:0:1:27:3.7%:41:5E-1:43:26:13:13:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:26 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:47:0%:89:1E0:43:47:19:28:47 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:26 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:46 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:30 0/0:0:0:0:0:56:0%:99:1E0:43:56:29:27:56 0/0:0:0:0:0:57:0%:99:1E0:41:57:28:29:58 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:54:0%:99:1E0:41:54:33:21:55 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:42 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:44 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:41 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:34 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:38 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:47 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:31 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:46 0/0:0:0:0:0:69:0%:99:1E0:38:69:28:41:70 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:43 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:47 0/0:0:0:0:0:48:0%:89:1E0:41:48:20:28:49 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:28 0/0:0:0:0:0:82:0%:99:1E0:43:82:42:40:84 0/0:0:0:0:0:65:0%:99:1E0:43:65:40:25:67 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:48 MTB_anc 1532909 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.725T>G|p.Val242Gly|725/1191|725/1191|242/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532909A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532909A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:30:20:50 0/0:0:0:0:0:18:0%:32:1E0:50:18:11:7:19 0/0:39:1:0:1:59:1.69%:98:5E-1:43:58:26:32:60 0/0:0:0:0:0:25:0%:48:1E0:52:25:14:11:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:33 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:53:0%:99:1E0:51:53:19:34:54 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:42 0/0:60:1:1:0:39:2.56%:62:5E-1:48:38:18:20:40 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:31 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:42 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:49 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:36 0/0:0:0:0:0:49:0%:93:1E0:43:49:26:23:49 0/0:0:0:0:0:54:0%:99:1E0:47:54:30:24:54 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:40 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:22 0/0:32:1:0:1:32:3.12%:48:5E-1:41:31:14:17:33 0/0:0:0:0:0:16:0%:29:1E0:48:16:6:10:16 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:60:1:0:1:61:1.64%:99:5E-1:47:60:34:26:61 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:61:0%:99:1E0:46:61:32:29:61 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:60:1:1:0:78:1.28%:99:5E-1:48:77:44:33:80 0/0:0:0:0:0:77:0%:99:1E0:49:77:35:42:80 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:45 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:6:21:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:34 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:45:0%:85:1E0:48:45:26:19:46 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:47:0%:89:1E0:47:47:24:23:47 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:24:0%:44:1E0:48:24:7:17:24 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:47:0%:89:1E0:45:47:18:29:47 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:56:0%:99:1E0:47:56:22:34:56 0/0:0:0:0:0:34:0%:62:1E0:52:34:13:21:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:40:0%:74:1E0:47:40:16:24:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:61:0%:99:1E0:47:61:27:34:63 0/0:0:0:0:0:82:0%:99:1E0:47:82:45:37:82 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:55:0%:99:1E0:45:55:26:29:55 0/0:0:0:0:0:21:0%:40:1E0:50:21:11:10:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:60:1:0:1:48:2.08%:76:5E-1:48:47:27:20:50 0/0:0:0:0:0:49:0%:93:1E0:49:49:28:21:49 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:52:0%:96:1E0:49:52:25:27:54 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:38 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:48:0%:89:1E0:43:48:16:32:49 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:47 0/0:60:1:1:0:40:2.5%:62:5E-1:49:39:21:18:41 0/0:0:0:0:0:50:0%:92:1E0:49:50:25:25:50 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:23 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:60:1:0:1:38:2.63%:58:5E-1:47:37:16:21:39 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:28 0/0:0:0:0:0:52:0%:96:1E0:41:52:31:21:55 0/1:47:13:6:7:55:23.64%:42:5.473E-5:46:42:18:24:55 0/0:0:0:0:0:97:0%:99:1E0:43:97:44:53:98 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:26 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:36 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:47 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:25 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:33 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:37 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:46 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:43 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:30 0/0:0:0:0:0:54:0%:99:1E0:43:54:29:25:56 0/0:0:0:0:0:58:0%:99:1E0:41:58:29:29:59 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:52:0%:96:1E0:41:52:31:21:55 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:42 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:44 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:41 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:38 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:47 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:32 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:46 0/0:0:0:0:0:70:0%:99:1E0:38:70:28:42:70 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:43 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:47 0/0:0:0:0:0:49:0%:93:1E0:40:49:21:28:49 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:84:0%:99:1E0:43:84:44:40:84 0/0:0:0:0:0:67:0%:99:1E0:42:67:39:28:68 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:48 MTB_anc 1532910 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.724G>A|p.Val242Met|724/1191|724/1191|242/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532910C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532910C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:44:49:29:20:50 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:19 0/0:39:1:0:1:58:1.72%:94:5E-1:44:57:25:32:58 0/0:0:0:0:0:26:0%:47:1E0:51:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:55:0%:99:1E0:50:55:20:35:55 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:39:0%:74:1E0:49:39:19:20:41 0/0:60:1:1:0:40:2.5%:62:5E-1:48:39:19:20:40 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:30 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:49:0%:93:1E0:45:49:22:27:49 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:19 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:36 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:49 0/0:0:0:0:0:54:0%:99:1E0:47:54:30:24:54 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:39 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:17:0%:33:1E0:49:17:6:11:17 0/0:60:1:1:0:35:2.86%:55:5E-1:45:34:19:15:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:62:0%:99:1E0:48:62:35:27:62 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:60:0%:99:1E0:46:60:32:28:62 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:37 0/0:0:0:0:0:81:0%:99:1E0:48:81:46:35:81 0/0:0:0:0:0:79:0%:99:1E0:49:79:37:42:80 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:45 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:39:1:0:1:28:3.57%:41:5E-1:44:27:7:20:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:44:0%:81:1E0:49:44:26:18:45 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:47:0%:89:1E0:47:47:24:23:47 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:46:0%:85:1E0:45:46:18:28:47 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:55:0%:99:1E0:47:55:21:34:56 0/0:0:0:0:0:34:0%:62:1E0:52:34:13:21:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:41:0%:78:1E0:47:41:16:25:41 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:41 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:62:0%:99:1E0:47:62:27:35:64 0/0:0:0:0:0:82:0%:99:1E0:46:82:45:37:82 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:54:0%:99:1E0:45:54:26:28:54 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:60:1:0:1:49:2.04%:80:5E-1:47:48:28:20:50 0/0:0:0:0:0:47:0%:89:1E0:49:47:27:20:47 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:20 0/0:0:0:0:0:54:0%:99:1E0:48:54:25:29:54 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:48:0%:89:1E0:43:48:16:32:48 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:47 0/0:60:1:1:0:42:2.38%:66:5E-1:49:41:23:18:42 0/0:0:0:0:0:50:0%:92:1E0:50:50:25:25:50 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:60:1:0:1:38:2.63%:58:5E-1:47:37:16:21:39 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:28 0/0:0:0:0:0:55:0%:99:1E0:41:55:33:22:55 0/1:48:13:6:7:55:23.64%:42:5.3813E-5:45:41:18:23:55 0/0:0:0:0:0:99:0%:99:1E0:43:99:45:54:99 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:44:0%:81:1E0:45:44:17:27:44 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:48 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:38 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:46 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:56:0%:99:1E0:43:56:30:26:56 0/0:0:0:0:0:58:0%:99:1E0:41:58:29:29:59 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:56:0%:99:1E0:40:56:32:24:57 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:42 0/0:39:1:0:1:43:2.33%:70:5E-1:42:42:22:20:44 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:41 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:47:0%:89:1E0:40:47:26:21:47 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:46 0/0:0:0:0:0:69:0%:99:1E0:38:69:28:41:70 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:47 0/0:38:1:0:1:49:2.04%:80:5E-1:41:48:21:27:49 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:84:0%:99:1E0:43:84:43:41:85 0/0:0:0:0:0:67:0%:99:1E0:42:67:39:28:69 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:48 MTB_anc 1532913 . T C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.721A>G|p.Ile241Val|721/1191|721/1191|241/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1532913T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1532913T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:30:20:50 0/0:0:0:0:0:19:0%:37:1E0:52:19:11:8:20 0/0:38:1:0:1:57:1.75%:95:5E-1:44:56:24:32:57 0/0:0:0:0:0:26:0%:47:1E0:51:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:56:0%:99:1E0:50:56:21:35:56 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:30 0/0:0:0:0:0:40:0%:74:1E0:49:40:20:20:41 0/0:60:1:1:0:40:2.5%:62:5E-1:48:39:19:20:40 0/0:0:0:0:0:27:0%:52:1E0:49:27:10:17:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:47:0%:89:1E0:46:47:20:27:48 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:23 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:19 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:36 0/0:0:0:0:0:48:0%:89:1E0:44:48:25:23:49 0/0:0:0:0:0:51:0%:97:1E0:47:51:28:23:52 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:41 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:33 0/0:0:0:0:0:18:0%:32:1E0:50:18:6:12:19 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:62:0%:99:1E0:48:62:36:26:63 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:61:0%:99:1E0:47:61:33:28:62 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:41 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:38 0/0:0:0:0:0:79:0%:99:1E0:49:79:46:33:81 0/0:0:0:0:0:79:0%:99:1E0:49:79:36:43:82 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:45 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:7:21:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:45:0%:85:1E0:48:45:26:19:46 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:0:0:0:0:47:0%:89:1E0:48:47:25:22:47 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:25:0%:48:1E0:48:25:8:17:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:46:0%:85:1E0:45:46:18:28:47 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:55:0%:99:1E0:48:55:22:33:55 0/0:0:0:0:0:34:0%:62:1E0:52:34:13:21:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:41:0%:78:1E0:47:41:16:25:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:41 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:64:0%:99:1E0:47:64:27:37:64 0/0:0:0:0:0:82:0%:99:1E0:47:82:45:37:82 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:54:0%:99:1E0:45:54:27:27:54 0/0:0:0:0:0:21:0%:40:1E0:52:21:11:10:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:60:1:0:1:50:2%:80:5E-1:48:49:29:20:50 0/0:0:0:0:0:48:0%:89:1E0:49:48:28:20:48 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:53:0%:99:1E0:47:53:25:28:53 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:38 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:48:0%:89:1E0:43:48:16:32:48 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:49 0/0:60:1:1:0:42:2.38%:66:5E-1:48:41:22:19:42 0/0:0:0:0:0:50:0%:92:1E0:50:50:25:25:50 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:22:0%:40:1E0:50:22:14:8:23 0/0:0:0:0:0:36:0%:66:1E0:51:36:16:20:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:60:1:0:1:39:2.56%:62:5E-1:47:38:17:21:39 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:28 0/0:0:0:0:0:55:0%:99:1E0:42:55:32:23:57 0/1:47:13:6:7:55:23.64%:42:5.473E-5:46:42:18:24:55 0/0:0:0:0:0:101:0%:99:1E0:43:101:47:54:101 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:42:0%:77:1E0:46:42:15:27:44 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:47 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:29 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:57:0%:99:1E0:43:57:31:26:57 0/0:0:0:0:0:57:0%:99:1E0:42:57:29:28:57 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:57:0%:99:1E0:40:57:34:23:58 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:44 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:45 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:43 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:47 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:46 0/0:0:0:0:0:70:0%:99:1E0:38:70:28:42:70 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:43 0/0:0:0:0:0:48:0%:89:1E0:46:48:28:20:48 0/0:0:0:0:0:50:0%:92:1E0:41:50:21:29:50 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:41 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:85:0%:99:1E0:43:85:44:41:85 0/0:0:0:0:0:68:0%:99:1E0:42:68:39:29:70 0/0:0:0:0:0:47:0%:89:1E0:43:47:19:28:48 MTB_anc 1533004 . T C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.630A>G|p.Gln210Gln|630/1191|630/1191|210/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1533004T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1533004T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:47 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:20 0/0:0:0:0:0:56:0%:99:1E0:47:56:23:33:56 0/0:0:0:0:0:27:0%:52:1E0:50:27:17:10:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:53:0%:99:1E0:49:53:21:32:53 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:39 0/0:0:0:0:0:39:0%:74:1E0:49:39:23:16:39 0/0:0:0:0:0:30:0%:55:1E0:50:30:16:14:30 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:45 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:44:24:18:6:24 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:36 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:51 0/0:0:0:0:0:51:0%:97:1E0:47:51:31:20:51 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:20:0%:36:1E0:50:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:37 0/0:0:0:0:0:48:0%:89:1E0:53:48:27:21:50 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:53:0%:99:1E0:48:53:28:25:53 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:35 0/0:0:0:0:0:67:0%:99:1E0:46:67:33:34:67 0/1:46:44:20:24:81:54.32%:99:1.6045E-17:45:37:15:22:83 0/0:0:0:0:0:45:0%:85:1E0:47:45:26:19:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:42:0%:77:1E0:49:42:22:20:42 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:20:7:27 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:42 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:51:0%:97:1E0:42:51:22:29:51 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:39 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:44 0/0:0:0:0:0:17:0%:33:1E0:49:17:6:11:17 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:46 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:54:0%:99:1E0:44:54:22:32:55 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:46:5:2:3:69:7.25%:81:2.8994E-2:48:64:29:35:70 0/0:0:0:0:0:80:0%:99:1E0:45:80:45:35:81 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:47 0/0:0:0:0:0:14:0%:25:1E0:51:14:9:5:15 0/0:0:0:0:0:31:0%:59:1E0:47:31:22:9:32 0/0:0:0:0:0:50:0%:92:1E0:46:50:29:21:50 0/0:0:0:0:0:51:0%:97:1E0:48:51:27:24:52 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:20 0/0:0:0:0:0:60:0%:99:1E0:49:60:26:34:60 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:40:0%:74:1E0:47:40:15:25:41 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:21 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:50 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:49:0%:93:1E0:48:49:26:23:49 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:22 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:38:1:1:0:43:2.33%:70:5E-1:47:42:20:22:43 0/0:0:0:0:0:28:0%:51:1E0:51:28:14:14:28 0/0:0:0:0:0:68:0%:99:1E0:43:68:44:24:70 0/0:0:0:0:0:67:0%:99:1E0:43:67:31:36:67 0/0:0:0:0:0:92:0%:99:1E0:42:92:51:41:93 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:29 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:47 0/0:49:2:2:0:22:9.09%:24:2.4419E-1:43:20:9:11:22 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:43 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:33 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:31 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:42 0/0:38:1:1:0:39:2.56%:62:5E-1:41:38:25:13:40 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:29 0/0:0:0:0:0:49:0%:93:1E0:45:49:31:18:51 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:18 0/0:0:0:0:0:59:0%:99:1E0:41:59:37:22:61 0/0:0:0:0:0:48:0%:89:1E0:41:48:30:18:49 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:52:0%:96:1E0:42:52:30:22:55 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:41 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:52 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:29:14:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:45 0/0:0:0:0:0:35:0%:67:1E0:41:35:23:12:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:25 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:68:0%:99:1E0:40:68:35:33:68 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:44 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:47 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:45 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:46 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:39:0%:74:1E0:47:39:23:16:39 0/0:0:0:0:0:38:0%:70:1E0:38:38:20:18:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:88:0%:99:1E0:43:88:44:44:89 0/0:0:0:0:0:63:0%:99:1E0:42:63:37:26:65 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 MTB_anc 1533208 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.426C>G|p.Gly142Gly|426/1191|426/1191|142/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1533208G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1533208G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:38:29:9:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:69:40:29:69:100%:99:4.233E-41:0:0:0:0:69 1/1:46:77:39:38:77:100%:99:6.8219E-46:0:0:0:0:78 1/1:47:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:21:8:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:39:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:12:20:33:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:63:35:28:63:100%:99:1.657E-37:0:0:0:0:64 1/1:45:81:57:24:81:100%:99:2.7329E-48:0:0:0:0:83 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:53:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:61:27:34:61:100%:99:2.609E-36:0:0:0:0:61 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:43:28:15:44:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:83:58:25:83:100%:99:1.729E-49:0:0:0:0:85 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:85:54:31:85:100%:99:1.0935E-50:0:0:0:0:85 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:26:10:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:75:40:35:76:98.68%:99:1.0773E-44:0:0:0:0:76 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 MTB_anc 1533241 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.393C>G|p.Thr131Thr|393/1191|393/1191|131/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1533241G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1533241G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:44:28:16:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:36:29:7:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:34:20:14:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:41:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:32:7:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:18:12:6:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:26:18:8:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:44:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:32:19:13:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:45:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:67:40:27:68:98.53%:99:6.6743E-40:0:0:0:0:69 1/1:44:72:39:33:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:68:39:29:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:42:90:66:24:90:100%:99:1.0988E-53:0:0:0:0:92 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:46:31:15:47:97.87%:99:2.4343E-27:0:0:0:0:48 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:75:51:24:75:100%:99:1.0773E-44:0:0:0:0:75 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:83:55:28:83:100%:99:1.729E-49:0:0:0:0:84 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:75:44:31:75:100%:99:1.0773E-44:0:0:0:0:76 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 1533327 . C T . PASS AC=2;AF=6.757e-03;AN=296;ANN=T|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.307G>A|p.Gly103Arg|307/1191|307/1191|103/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1533327C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1533327C>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:23:0%:44:1E0:36:23:13:10:23 0/0:0:0:0:0:11:0%:22:1E0:38:11:8:3:11 0/0:0:0:0:0:29:0%:55:1E0:38:29:20:9:29 0/0:0:0:0:0:12:0%:21:1E0:37:12:5:7:13 0/0:0:0:0:0:17:0%:33:1E0:37:17:16:1:17 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:15 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:38 0/0:0:0:0:0:14:0%:25:1E0:36:14:7:7:16 0/0:0:0:0:0:15:0%:29:1E0:38:15:11:4:15 0/0:38:3:1:2:31:9.68%:34:1.1885E-1:37:28:24:4:31 0/0:0:0:0:0:17:0%:33:1E0:37:17:13:4:17 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:32:0%:59:1E0:37:32:18:14:33 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:22 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:28 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:16 0/0:0:0:0:0:17:0%:33:1E0:36:17:12:5:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:13 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:19:5:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:21 0/0:0:0:0:0:14:0%:25:1E0:36:14:11:3:15 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:12 0/0:0:0:0:0:11:0%:22:1E0:40:11:9:2:11 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:17 0/0:0:0:0:0:20:0%:36:1E0:36:20:16:4:21 0/0:0:0:0:0:25:0%:48:1E0:36:25:17:8:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 0/0:0:0:0:0:36:0%:66:1E0:37:36:22:14:36 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:19 0/0:0:0:0:0:33:0%:63:1E0:39:33:22:11:35 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:19 0/0:0:0:0:0:25:0%:48:1E0:38:25:18:7:25 0/0:37:1:1:0:55:1.82%:91:5E-1:37:54:31:23:55 0/0:0:0:0:0:60:0%:99:1E0:38:60:37:23:61 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:32 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:22 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/0:0:0:0:0:12:0%:21:1E0:36:12:9:3:12 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:16 0/0:0:0:0:0:18:0%:32:1E0:36:18:16:2:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:18 0/0:0:0:0:0:14:0%:25:1E0:39:14:6:8:14 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:24 0/0:0:0:0:0:30:0%:55:1E0:38:30:20:10:30 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:28 0/0:0:0:0:0:18:0%:32:1E0:38:18:13:5:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:15:13:28 0/0:0:0:0:0:18:0%:32:1E0:36:18:13:5:19 0/0:0:0:0:0:22:0%:40:1E0:38:22:16:6:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:22 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:37:24:15:9:24 0/0:0:0:0:0:19:0%:37:1E0:37:19:13:6:20 0/0:37:1:0:1:25:4%:38:5E-1:36:24:17:7:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:29 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:21 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:23 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:60:0%:99:1E0:37:60:42:18:61 0/1:37:18:14:4:68:26.47%:59:1.044E-6:37:50:37:13:71 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:16 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:17 0/0:0:0:0:0:32:0%:59:1E0:37:32:16:16:32 0/0:34:1:1:0:28:3.57%:41:5E-1:38:27:14:13:28 0/0:0:0:0:0:12:0%:21:1E0:40:12:11:1:12 0/0:0:0:0:0:49:0%:93:1E0:37:49:30:19:49 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:30 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:18 0/0:0:0:0:0:21:0%:40:1E0:37:21:16:5:21 0/0:38:1:0:1:19:5.26%:28:5E-1:37:18:9:9:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:16 0/0:0:0:0:0:15:0%:29:1E0:36:15:11:4:15 0/0:0:0:0:0:16:0%:29:1E0:37:16:6:10:16 0/0:0:0:0:0:34:0%:62:1E0:36:34:25:9:34 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:21 0/0:0:0:0:0:37:0%:70:1E0:41:37:27:10:37 0/0:0:0:0:0:24:0%:44:1E0:38:24:18:6:25 0/0:0:0:0:0:29:0%:55:1E0:37:29:19:10:29 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:21 0/0:0:0:0:0:14:0%:25:1E0:41:14:10:4:14 0/0:33:1:1:0:19:5.26%:28:5E-1:41:18:10:8:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:16 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:25 0/0:35:3:1:2:17:17.65%:14:1.1364E-1:37:14:7:7:17 0/0:0:0:0:0:42:0%:77:1E0:37:42:26:16:44 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:28 0/0:37:3:1:2:57:5.26%:76:1.2168E-1:36:54:39:15:59 0/0:37:1:1:0:19:5.26%:28:5E-1:38:18:12:6:20 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:15 0/0:52:1:1:0:19:5.26%:28:5E-1:37:18:12:6:19 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:22 0/0:0:0:0:0:25:0%:48:1E0:36:25:20:5:25 0/0:0:0:0:0:12:0%:21:1E0:37:12:9:3:12 0/0:0:0:0:0:14:0%:25:1E0:37:14:10:4:14 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:20 0/0:0:0:0:0:11:0%:22:1E0:38:11:9:2:11 0/0:34:1:1:0:12:8.33%:14:5E-1:37:11:7:4:13 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:14 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:17 0/0:0:0:0:0:24:0%:44:1E0:36:24:18:6:24 0/0:34:1:0:1:23:4.35%:34:5E-1:36:22:14:8:23 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:16 0/0:0:0:0:0:20:0%:36:1E0:37:20:15:5:21 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:12 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:16 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:19 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:19 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:0:0:0:0:23:0%:44:1E0:36:23:17:6:25 0/0:0:0:0:0:15:0%:29:1E0:36:15:11:4:15 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:33 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:16 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:13 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:19 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:21 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:12 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:18 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:22 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:13 0/0:0:0:0:0:23:0%:44:1E0:36:23:14:9:24 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:18 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:14 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:19 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:0:0:0:0:19:0%:37:1E0:35:19:11:8:21 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:26 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:29 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:36:24:15:9:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:25 0/0:0:0:0:0:10:0%:17:1E0:36:10:7:3:10 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:25:0%:48:1E0:36:25:18:7:25 0/0:0:0:0:0:15:0%:29:1E0:35:15:8:7:16 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:20 0/0:0:0:0:0:22:0%:40:1E0:37:22:14:8:22 0/1:38:16:8:8:47:34.04%:54:3.2755E-6:38:31:19:12:51 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:20 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:14 MTB_anc 1533334 . C T . PASS AC=3;AF=0.010;AN=298;ANN=T|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.300G>A|p.Thr100Thr|300/1191|300/1191|100/396||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1533334C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1533334C>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:18:0%:32:1E0:36:18:10:8:18 0/0:0:0:0:0:11:0%:22:1E0:38:11:8:3:11 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:28 0/0:0:0:0:0:14:0%:25:1E0:36:14:6:8:14 0/0:0:0:0:0:17:0%:33:1E0:36:17:16:1:17 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:13 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:34 0/0:0:0:0:0:12:0%:21:1E0:34:12:6:6:13 0/0:0:0:0:0:15:0%:29:1E0:35:15:11:4:15 0/0:39:2:0:2:30:6.67%:37:2.4576E-1:37:28:24:4:30 0/0:0:0:0:0:18:0%:32:1E0:35:18:14:4:19 0/0:0:0:0:0:30:0%:55:1E0:35:30:16:14:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:34:0%:62:1E0:35:34:17:17:34 0/0:0:0:0:0:20:0%:36:1E0:34:20:12:8:21 0/0:0:0:0:0:26:0%:47:1E0:35:26:18:8:27 0/0:0:0:0:0:14:0%:25:1E0:36:14:7:7:14 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:15 0/0:0:0:0:0:7:0%:14:1E0:34:7:5:2:7 0/0:0:0:0:0:10:0%:17:1E0:34:10:5:5:10 0/0:0:0:0:0:14:0%:25:1E0:34:14:7:7:15 0/0:0:0:0:0:28:0%:51:1E0:36:28:12:16:29 0/0:0:0:0:0:21:0%:40:1E0:39:21:16:5:22 0/0:0:0:0:0:18:0%:32:1E0:35:18:11:7:18 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:22 0/0:0:0:0:0:14:0%:25:1E0:36:14:10:4:14 0/0:38:1:1:0:11:9.09%:14:5E-1:37:10:4:6:11 0/0:0:0:0:0:11:0%:22:1E0:40:11:9:2:11 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:15 0/0:0:0:0:0:19:0%:37:1E0:35:19:14:5:20 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:20 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 0/0:0:0:0:0:32:0%:59:1E0:36:32:19:13:33 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:19 0/0:0:0:0:0:34:0%:62:1E0:38:34:21:13:35 0/0:0:0:0:0:17:0%:33:1E0:35:17:7:10:17 0/0:0:0:0:0:24:0%:44:1E0:36:24:17:7:24 0/0:0:0:0:0:48:0%:89:1E0:36:48:26:22:48 0/0:37:1:1:0:56:1.79%:91:5E-1:36:55:31:24:56 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:30 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:20 0/0:0:0:0:0:20:0%:36:1E0:35:20:8:12:20 0/0:0:0:0:0:14:0%:25:1E0:36:14:8:6:14 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:20 0/0:0:0:0:0:16:0%:29:1E0:35:16:13:3:16 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:14 0/0:0:0:0:0:24:0%:44:1E0:35:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:28 0/0:0:0:0:0:28:0%:51:1E0:35:28:16:12:28 0/0:0:0:0:0:15:0%:29:1E0:35:15:10:5:15 0/0:37:1:0:1:25:4%:38:5E-1:36:24:13:11:26 0/0:0:0:0:0:19:0%:37:1E0:35:19:13:6:19 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:20 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:22 0/0:0:0:0:0:29:0%:55:1E0:35:29:15:14:30 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:21 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:18 0/0:33:1:0:1:22:4.55%:31:5E-1:35:21:14:7:22 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:27 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:18 0/0:0:0:0:0:19:0%:37:1E0:36:19:12:7:21 0/0:0:0:0:0:19:0%:37:1E0:38:19:13:6:20 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:31 0/0:0:0:0:0:55:0%:99:1E0:36:55:37:18:56 0/1:36:16:10:6:60:26.67%:53:4.8192E-6:36:44:31:13:65 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:28 0/0:0:0:0:0:12:0%:21:1E0:35:12:9:3:12 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:16 0/0:0:0:0:0:30:0%:55:1E0:36:30:14:16:30 0/1:36:11:4:7:23:47.83%:39:1.0135E-4:36:12:7:5:25 0/0:0:0:0:0:13:0%:25:1E0:38:13:10:3:13 0/0:0:0:0:0:47:0%:89:1E0:35:47:29:18:47 0/0:0:0:0:0:27:0%:52:1E0:36:27:14:13:28 0/0:0:0:0:0:11:0%:22:1E0:36:11:6:5:13 0/0:0:0:0:0:16:0%:29:1E0:37:16:12:4:16 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:17 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:13 0/0:0:0:0:0:13:0%:25:1E0:35:13:10:3:13 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:16 0/0:0:0:0:0:30:0%:55:1E0:36:30:22:8:30 0/0:0:0:0:0:21:0%:40:1E0:35:21:13:8:22 0/0:0:0:0:0:38:0%:70:1E0:39:38:27:11:38 0/0:0:0:0:0:22:0%:40:1E0:35:22:16:6:23 0/0:0:0:0:0:25:0%:48:1E0:34:25:15:10:25 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:19 0/0:0:0:0:0:14:0%:25:1E0:39:14:10:4:14 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:21 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:16 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:23 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:16 0/0:0:0:0:0:41:0%:78:1E0:35:41:24:17:42 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:22 0/0:0:0:0:0:52:0%:96:1E0:35:52:33:19:53 0/0:38:1:1:0:16:6.25%:21:5E-1:37:15:9:6:16 0/0:0:0:0:0:15:0%:29:1E0:35:15:7:8:15 0/0:0:0:0:0:17:0%:33:1E0:37:17:11:6:17 0/0:0:0:0:0:17:0%:33:1E0:36:17:12:5:17 0/0:0:0:0:0:22:0%:40:1E0:35:22:18:4:22 0/0:0:0:0:0:12:0%:21:1E0:36:12:9:3:12 0/0:0:0:0:0:11:0%:22:1E0:36:11:8:3:12 0/0:0:0:0:0:21:0%:40:1E0:35:21:13:8:21 0/0:0:0:0:0:11:0%:22:1E0:36:11:9:2:12 0/0:38:1:1:0:12:8.33%:14:5E-1:36:11:7:4:12 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:21 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:14 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:18 0/0:0:0:0:0:21:0%:40:1E0:35:21:14:7:21 0/0:0:0:0:0:25:0%:48:1E0:36:25:14:11:25 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:17 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:20 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:10 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:18 0/0:0:0:0:0:19:0%:37:1E0:36:19:12:7:19 0/0:0:0:0:0:20:0%:36:1E0:34:20:10:10:21 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:13 0/0:0:0:0:0:19:0%:37:1E0:36:19:12:7:20 0/0:0:0:0:0:13:0%:25:1E0:35:13:9:4:14 0/0:0:0:0:0:27:0%:52:1E0:37:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:37:33:17:16:33 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:14 0/0:0:0:0:0:20:0%:36:1E0:34:20:15:5:20 0/0:0:0:0:0:17:0%:33:1E0:35:17:9:8:18 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:10 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:15 0/0:0:0:0:0:20:0%:36:1E0:35:20:11:9:20 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:12 0/0:0:0:0:0:18:0%:32:1E0:35:18:9:9:18 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:16 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:15 0/0:0:0:0:0:16:0%:29:1E0:35:16:7:9:16 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:11 0/0:0:0:0:0:17:0%:33:1E0:35:17:9:8:18 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:25 0/0:0:0:0:0:30:0%:55:1E0:35:30:15:15:30 0/0:38:1:0:1:17:5.88%:24:5E-1:35:16:9:7:17 0/0:0:0:0:0:25:0%:48:1E0:35:25:15:10:25 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:23 0/0:0:0:0:0:10:0%:17:1E0:36:10:7:3:10 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:23 0/0:0:0:0:0:22:0%:40:1E0:35:22:16:6:22 0/0:0:0:0:0:15:0%:29:1E0:34:15:5:10:15 0/0:0:0:0:0:18:0%:32:1E0:36:18:7:11:18 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:17 0/1:37:18:11:7:46:39.13%:63:4.7997E-7:36:28:15:13:48 0/0:0:0:0:0:21:0%:40:1E0:35:21:13:8:21 0/0:0:0:0:0:14:0%:25:1E0:35:14:8:6:14 MTB_anc 1533381 . C G . PASS AC=1;AF=3.378e-03;AN=296;ANN=G|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.253G>C|p.Glu85Gln|253/1191|253/1191|85/396||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1533381C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1533381C>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:26 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:13 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:31 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:13 0/0:0:0:0:0:12:0%:21:1E0:37:12:11:1:14 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:15 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:30 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:11 0/0:0:0:0:0:10:0%:17:1E0:37:10:8:2:10 0/0:0:0:0:0:29:0%:55:1E0:37:29:17:12:30 0/0:0:0:0:0:15:0%:29:1E0:38:15:10:5:15 0/0:0:0:0:0:24:0%:44:1E0:35:24:9:15:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:32:0%:59:1E0:35:32:10:22:34 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:12 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:23 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:15 0/0:0:0:0:0:13:0%:25:1E0:39:13:9:4:13 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:9 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:10 0/0:0:0:0:0:14:0%:25:1E0:37:14:9:5:14 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:22 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:18 0/0:60:1:0:1:13:7.69%:18:5E-1:37:12:6:6:14 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:14 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:9 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:14 0/0:0:0:0:0:18:0%:32:1E0:34:18:10:8:21 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:24 0/0:34:1:0:1:16:6.25%:21:5E-1:36:15:9:6:16 0/0:0:0:0:0:34:0%:62:1E0:37:34:18:16:34 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:14 0/0:0:0:0:0:33:0%:63:1E0:36:33:15:18:34 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:19 0/0:0:0:0:0:19:0%:37:1E0:35:19:12:7:21 0/0:0:0:0:0:47:0%:89:1E0:36:47:27:20:48 0/0:0:0:0:0:46:0%:85:1E0:36:46:22:24:47 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:20 0/0:0:0:0:0:17:0%:33:1E0:34:17:5:12:17 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:19 0/0:0:0:0:0:12:0%:21:1E0:37:12:7:5:12 0/0:0:0:0:0:23:0%:44:1E0:36:23:10:13:23 0/0:0:0:0:0:11:0%:22:1E0:36:11:10:1:14 0/0:0:0:0:0:19:0%:37:1E0:36:19:8:11:19 0/0:0:0:0:0:14:0%:25:1E0:34:14:6:8:16 0/0:0:0:0:0:24:0%:44:1E0:38:24:7:17:24 0/0:0:0:0:0:22:0%:40:1E0:35:22:12:10:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:23 0/0:0:0:0:0:15:0%:29:1E0:36:15:8:7:15 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:17 0/0:0:0:0:0:14:0%:25:1E0:36:14:8:6:16 0/0:0:0:0:0:16:0%:29:1E0:35:16:8:8:16 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:19 0/0:0:0:0:0:29:0%:55:1E0:36:29:16:13:30 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:23 0/0:0:0:0:0:16:0%:29:1E0:35:16:9:7:16 0/0:0:0:0:0:21:0%:40:1E0:35:21:12:9:23 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:18 0/0:0:0:0:0:18:0%:32:1E0:35:18:7:11:19 0/0:0:0:0:0:24:0%:44:1E0:35:24:13:11:25 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:37:31:13:18:34 0/0:0:0:0:0:46:0%:85:1E0:36:45:24:21:47 0/0:0:0:0:0:49:0%:93:1E0:37:49:24:25:54 0/0:0:0:0:0:16:0%:29:1E0:36:16:5:11:17 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:31 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:11 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:14 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:19 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:35 0/0:39:1:1:0:14:7.14%:17:5E-1:40:13:7:6:14 0/0:0:0:0:0:38:0%:70:1E0:36:38:21:17:39 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:23 0/0:0:0:0:0:12:0%:21:1E0:38:12:7:5:13 0/0:0:0:0:0:16:0%:29:1E0:35:16:9:7:17 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:20 0/0:0:0:0:0:11:0%:22:1E0:38:11:6:5:11 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:31 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:18 0/0:60:1:1:0:34:2.94%:51:5E-1:36:33:19:14:34 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:21 0/0:0:0:0:0:19:0%:37:1E0:35:19:8:11:19 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:14 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:15 0/0:0:0:0:0:24:0%:44:1E0:35:24:9:15:26 0/0:0:0:0:0:21:0%:40:1E0:34:21:8:13:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:20 0/0:0:0:0:0:14:0%:25:1E0:36:14:8:6:15 0/1:37:8:1:7:28:28.57%:26:2.188E-3:36:20:11:9:31 0/0:0:0:0:0:20:0%:36:1E0:36:20:5:15:21 0/0:0:0:0:0:39:0%:74:1E0:35:39:16:23:41 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:17 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:37:1:0:1:21:4.76%:31:5E-1:36:20:9:11:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 0/0:0:0:0:0:18:0%:32:1E0:36:18:13:5:18 0/0:0:0:0:0:17:0%:33:1E0:38:17:12:5:18 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:10 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:15 0/0:0:0:0:0:12:0%:21:1E0:35:12:9:3:13 0/0:37:1:1:0:8:12.5%:8:5E-1:37:7:3:4:9 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:17 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:14 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:23 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:23 0/0:0:0:0:0:24:0%:44:1E0:35:24:10:14:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:21 0/0:0:0:0:0:15:0%:29:1E0:35:15:8:7:16 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:10 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:18 0/0:0:0:0:0:17:0%:33:1E0:35:17:9:8:18 0/0:0:0:0:0:18:0%:32:1E0:35:18:8:10:18 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:9 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:20 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:0:0:0:0:31:0%:59:1E0:36:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:34:28:11:17:30 0/0:0:0:0:0:12:0%:21:1E0:34:12:7:5:14 0/0:0:0:0:0:14:0%:25:1E0:36:14:7:7:14 0/0:0:0:0:0:19:0%:37:1E0:36:19:13:6:20 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:14 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:23 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:17 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:17 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:11 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:14 0/0:0:0:0:0:14:0%:25:1E0:37:14:9:5:15 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:15 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:13 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:15 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:17 0/0:37:1:1:0:27:3.7%:41:5E-1:36:26:14:12:27 0/0:0:0:0:0:13:0%:25:1E0:37:13:9:4:13 0/0:0:0:0:0:18:0%:32:1E0:35:18:8:10:18 0/0:0:0:0:0:15:0%:29:1E0:37:15:9:6:15 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:21 0/0:0:0:0:0:9:0%:18:1E0:40:9:5:4:9 0/0:0:0:0:0:25:0%:48:1E0:36:25:16:9:26 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:16 0/0:0:0:0:0:23:0%:44:1E0:35:23:8:15:23 0/0:0:0:0:0:17:0%:33:1E0:35:17:5:12:17 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:60:1:0:1:38:2.63%:58:5E-1:36:37:21:16:40 0/0:0:0:0:0:23:0%:44:1E0:36:23:15:8:24 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:15 MTB_anc 1533434 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.200T>C|p.Val67Ala|200/1191|200/1191|67/396||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1533434A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1533434A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:44:0%:81:1E0:36:44:17:27:53 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:16 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:21 0/0:0:0:0:0:20:0%:36:1E0:35:20:10:10:23 0/1:45:8:4:4:25:32%:26:2.0146E-3:37:17:9:8:29 0/0:0:0:0:0:13:0%:25:1E0:34:13:2:11:18 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:15 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:37 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:20 0/0:0:0:0:0:31:0%:59:1E0:34:31:11:20:41 0/0:0:0:0:0:12:0%:21:1E0:42:12:8:4:13 0/0:0:0:0:0:37:0%:70:1E0:36:37:12:25:46 0/0:0:0:0:0:16:0%:29:1E0:35:16:7:9:23 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:28 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:26 0/0:33:1:0:1:19:5.26%:28:5E-1:35:18:10:8:22 0/0:0:0:0:0:8:0%:14:1E0:42:8:4:4:10 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:23 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:18 0/0:0:0:0:0:40:0%:74:1E0:36:40:12:28:43 0/0:36:1:0:1:36:2.78%:55:5E-1:39:35:18:17:38 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:32 0/0:0:0:0:0:21:0%:40:1E0:35:21:9:12:29 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:20 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:14 0/0:0:0:0:0:16:0%:29:1E0:39:16:6:10:18 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:17 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:31 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:20 0/0:32:1:0:1:34:2.94%:51:5E-1:39:33:17:16:41 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:12 0/0:0:0:0:0:42:0%:77:1E0:36:42:15:27:44 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:21 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:30 0/0:0:0:0:0:41:0%:78:1E0:38:41:22:19:48 0/0:0:0:0:0:41:0%:78:1E0:38:41:16:25:53 0/0:0:0:0:0:24:0%:44:1E0:35:24:9:15:30 0/0:0:0:0:0:17:0%:33:1E0:36:17:3:14:21 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:24 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:19 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:23 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:22 0/0:0:0:0:0:30:0%:55:1E0:36:30:11:19:36 0/0:0:0:0:0:23:0%:44:1E0:35:23:7:16:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:9:22:34 0/0:33:1:0:1:22:4.55%:31:5E-1:34:21:10:11:31 0/0:0:0:0:0:25:0%:48:1E0:35:25:14:11:30 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:18 0/0:0:0:0:0:31:0%:59:1E0:34:31:9:22:36 0/0:0:0:0:0:14:0%:25:1E0:35:14:6:8:20 0/0:0:0:0:0:21:0%:40:1E0:35:21:10:11:25 0/0:0:0:0:0:21:0%:40:1E0:35:21:9:12:23 0/0:0:0:0:0:31:0%:59:1E0:35:31:17:14:38 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:32 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:13 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:30 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:22 0/0:38:1:1:0:24:4.17%:34:5E-1:34:23:7:16:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:25 0/0:0:0:0:0:24:0%:44:1E0:35:24:7:17:30 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:42 0/0:0:0:0:0:50:0%:92:1E0:38:50:16:34:62 0/0:0:0:0:0:58:0%:99:1E0:37:58:19:39:74 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:30 0/0:0:0:0:0:33:0%:63:1E0:36:33:10:23:43 0/0:0:0:0:0:10:0%:17:1E0:43:10:4:6:17 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:41 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:14 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:52 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:33 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:32 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:25 0/0:0:0:0:0:17:0%:33:1E0:36:17:6:11:24 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:27 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:23 0/0:0:0:0:0:34:0%:62:1E0:35:34:14:20:41 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:34 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:23 0/0:0:0:0:0:21:0%:40:1E0:34:21:7:14:30 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:15 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:20 0/0:0:0:0:0:27:0%:52:1E0:34:27:11:16:34 0/0:0:0:0:0:23:0%:44:1E0:39:23:6:17:29 0/0:0:0:0:0:18:0%:32:1E0:35:18:7:11:23 0/0:0:0:0:0:14:0%:25:1E0:38:14:9:5:20 0/0:0:0:0:0:30:0%:55:1E0:35:30:10:20:43 0/0:35:3:0:3:15:20%:11:1.1207E-1:44:12:3:9:20 0/0:0:0:0:0:43:0%:82:1E0:36:43:16:27:62 0/0:0:0:0:0:11:0%:22:1E0:41:11:2:9:18 0/0:0:0:0:0:18:0%:32:1E0:35:18:8:10:19 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:31 0/0:0:0:0:0:22:0%:40:1E0:37:22:14:8:25 0/0:0:0:0:0:20:0%:36:1E0:35:20:10:10:24 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:25 0/0:0:0:0:0:15:0%:29:1E0:33:15:4:11:20 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:18 0/0:0:0:0:0:14:0%:25:1E0:34:14:8:6:21 0/0:0:0:0:0:7:0%:14:1E0:30:7:2:5:13 0/0:0:0:0:0:18:0%:32:1E0:36:18:6:12:22 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:19 0/0:0:0:0:0:20:0%:36:1E0:36:20:5:15:22 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:31 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:26 0/0:0:0:0:0:25:0%:48:1E0:35:25:13:12:34 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:25 0/0:0:0:0:0:16:0%:29:1E0:36:16:10:6:16 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:23 0/0:0:0:0:0:17:0%:33:1E0:34:17:10:7:23 0/0:0:0:0:0:28:0%:51:1E0:35:28:9:19:36 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:15 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:30 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:12 0/0:0:0:0:0:25:0%:48:1E0:36:25:8:17:31 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:30 0/0:0:0:0:0:12:0%:21:1E0:34:12:6:6:14 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:14 0/0:0:0:0:0:29:0%:55:1E0:35:29:14:15:37 0/0:0:0:0:0:13:0%:25:1E0:34:13:6:7:16 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:32 0/0:0:0:0:0:15:0%:29:1E0:34:15:6:9:21 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:28 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:26 0/0:0:0:0:0:9:0%:18:1E0:33:9:6:3:16 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:16 0/0:0:0:0:0:24:0%:44:1E0:36:24:13:11:31 0/0:0:0:0:0:17:0%:33:1E0:36:17:8:9:26 0/0:0:0:0:0:18:0%:32:1E0:34:18:7:11:19 0/0:0:0:0:0:12:0%:21:1E0:36:12:10:2:17 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:39 0/0:0:0:0:0:29:0%:55:1E0:35:29:11:18:40 0/0:0:0:0:0:22:0%:40:1E0:36:22:16:6:27 0/0:0:0:0:0:23:0%:44:1E0:33:23:8:15:28 0/0:0:0:0:0:17:0%:33:1E0:34:17:8:9:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:25 0/0:0:0:0:0:12:0%:21:1E0:44:12:6:6:15 0/0:0:0:0:0:27:0%:52:1E0:36:27:15:12:34 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:26 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:25 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:26 0/0:0:0:0:0:18:0%:32:1E0:33:18:5:13:20 0/0:0:0:0:0:47:0%:89:1E0:36:47:16:31:56 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:41 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:21 MTB_anc 1533583 . A G . PASS AC=3;AF=0.010;AN=300;ANN=G|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.51T>C|p.Tyr17Tyr|51/1191|51/1191|17/396||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1533583A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1533583A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:45:55:26:29:57 0/0:0:0:0:0:24:0%:44:1E0:49:24:8:16:24 0/0:0:0:0:0:72:0%:99:1E0:46:72:31:41:73 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:38:4:1:3:31:12.9%:29:5.6405E-2:47:27:13:14:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:7:19:27 0/0:60:2:2:0:31:6.45%:40:2.459E-1:50:29:14:15:31 0/0:42:4:1:3:41:9.76%:44:5.79E-2:50:37:13:24:41 0/0:60:1:1:0:36:2.78%:55:5E-1:45:35:13:22:36 0/0:0:0:0:0:47:0%:89:1E0:44:47:18:29:47 0/0:37:1:0:1:22:4.55%:31:5E-1:50:21:14:7:22 0/0:0:0:0:0:43:0%:82:1E0:42:43:15:28:43 0/0:0:0:0:0:33:0%:63:1E0:47:33:12:21:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:60:1:1:0:31:3.23%:48:5E-1:46:30:10:20:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:9:19:28 0/0:0:0:0:0:20:0%:36:1E0:48:20:6:14:20 0/0:0:0:0:0:26:0%:47:1E0:50:26:11:15:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:48:0%:89:1E0:48:48:22:26:50 0/0:39:1:0:1:38:2.63%:58:5E-1:50:37:13:24:39 0/0:39:1:0:1:40:2.5%:62:5E-1:43:39:19:20:43 0/0:60:1:0:1:31:3.23%:48:5E-1:43:30:11:19:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:47:20:5:15:20 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:40 0/0:0:0:0:0:29:0%:55:1E0:46:29:8:21:30 0/0:37:6:2:4:42:14.29%:33:1.2905E-2:48:36:15:21:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/1:38:7:0:7:49:14.29%:22:6.2092E-3:45:42:18:24:49 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:59:0%:99:1E0:45:59:24:35:59 0/0:0:0:0:0:59:0%:99:1E0:44:59:22:37:59 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:32:0%:59:1E0:51:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:25 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:21:0%:40:1E0:48:21:4:17:21 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:34:1:0:1:22:4.55%:31:5E-1:46:21:9:12:22 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:44 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:5:20:25 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:42:0%:77:1E0:46:42:15:27:45 0/0:0:0:0:0:32:0%:59:1E0:46:32:8:24:33 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:49:2:1:1:39:5.13%:54:2.4675E-1:45:37:17:20:40 0/0:38:3:0:3:48:6.25%:59:1.2105E-1:45:45:18:27:48 0/1:41:15:3:12:63:23.81%:49:1.1869E-5:46:48:15:33:64 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:60:1:1:0:25:4%:38:5E-1:44:24:10:14:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:39:2:1:1:38:5.26%:50:2.4667E-1:47:36:22:14:38 0/0:0:0:0:0:42:0%:77:1E0:49:42:17:25:42 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:42:6:2:4:40:15%:30:1.2773E-2:50:34:16:18:40 0/0:0:0:0:0:45:0%:85:1E0:44:45:13:32:45 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:60:1:1:0:36:2.78%:55:5E-1:44:35:18:17:37 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:60:1:1:0:45:2.22%:73:5E-1:46:44:16:28:46 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:11:26:38 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:43 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:39:2:0:2:33:6.06%:44:2.4615E-1:48:31:15:16:34 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:27 0/0:0:0:0:0:24:0%:44:1E0:49:24:7:17:24 0/0:60:1:1:0:29:3.45%:45:5E-1:48:28:13:15:30 0/1:38:10:0:10:50:20%:32:5.9342E-4:42:40:14:26:50 0/0:0:0:0:0:29:0%:55:1E0:44:29:9:20:29 0/0:37:1:0:1:52:1.92%:83:5E-1:44:51:16:35:52 0/0:38:3:0:3:28:10.71%:28:1.1818E-1:45:25:5:20:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:21:1:0:1:31:3.23%:48:5E-1:44:30:10:20:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:10:21:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:10:23:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:7:19:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:18 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:41 0/0:0:0:0:0:39:0%:74:1E0:47:39:15:24:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:18:0%:32:1E0:43:18:4:14:18 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:37 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:7:23:30 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:42 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:49 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:46 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:49 0/0:0:0:0:0:31:0%:59:1E0:38:31:8:23:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:29 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:42 0/0:0:0:0:0:56:0%:99:1E0:40:56:25:31:58 0/0:0:0:0:0:48:0%:89:1E0:43:48:28:20:49 0/0:0:0:0:0:42:0%:77:1E0:42:42:14:28:43 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:46 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:46 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:8:23:31 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:51 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:53 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 MTB_anc 1533625 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|PPE19_Rv1361c|gene1394|transcript|Transcript_gene1394|Coding|1/1|c.9C>T|p.Asp3Asp|9/1191|9/1191|3/396||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1533625G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1533625G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:43:52:24:28:53 0/0:0:0:0:0:24:0%:44:1E0:50:24:8:16:24 0/0:0:0:0:0:69:0%:99:1E0:49:69:30:39:70 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:22 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:24:0%:44:1E0:48:24:8:16:25 0/0:38:1:1:0:32:3.12%:48:5E-1:53:31:16:15:33 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:45 0/0:0:0:0:0:27:0%:52:1E0:52:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:13:26:39 0/0:0:0:0:0:35:0%:67:1E0:48:35:13:22:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:60:1:1:0:33:3.03%:52:5E-1:46:32:10:22:34 0/0:0:0:0:0:26:0%:47:1E0:49:26:7:19:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:48:0%:89:1E0:46:48:21:27:48 0/0:36:3:0:3:39:7.69%:47:1.2013E-1:49:36:13:23:39 0/0:38:1:0:1:45:2.22%:73:5E-1:43:44:22:22:46 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:21 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:37:3:2:1:42:7.14%:49:1.2048E-1:45:39:19:20:43 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:37:3:0:3:48:6.25%:59:1.2105E-1:44:45:24:21:48 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:54:0%:99:1E0:44:54:22:32:55 0/0:37:6:0:6:52:11.54%:47:1.3417E-2:47:46:23:23:52 0/0:0:0:0:0:44:0%:81:1E0:46:44:27:17:45 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:27 0/0:0:0:0:0:31:0%:59:1E0:51:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:20:0%:36:1E0:52:20:3:17:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:32 0/0:0:0:0:0:41:0%:78:1E0:46:41:25:16:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:6:17:23 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:42 0/0:0:0:0:0:41:0%:78:1E0:50:41:16:25:42 0/0:0:0:0:0:30:0%:55:1E0:46:30:10:20:30 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:31 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:47 0/0:49:2:1:1:39:5.13%:54:2.4675E-1:46:37:16:21:39 0/0:36:5:2:3:38:13.16%:32:2.7169E-2:43:33:14:19:38 0/0:36:4:0:4:50:8%:55:5.8732E-2:45:46:16:30:52 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:23:0%:44:1E0:51:23:9:14:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:45:0%:85:1E0:48:45:29:16:45 0/0:0:0:0:0:36:0%:66:1E0:48:36:14:22:36 0/0:0:0:0:0:18:0%:32:1E0:50:18:6:12:18 0/0:37:4:1:3:32:12.5%:29:5.6596E-2:48:28:14:14:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:11:29:41 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:29:0%:55:1E0:50:29:17:12:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:60:1:1:0:42:2.38%:66:5E-1:44:41:15:26:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:40:5:1:4:35:14.29%:30:2.6822E-2:49:30:15:15:35 0/0:0:0:0:0:39:0%:74:1E0:40:39:13:26:39 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:30 0/0:38:1:0:1:35:2.86%:55:5E-1:47:34:17:17:36 0/0:39:1:0:1:28:3.57%:41:5E-1:46:27:12:15:28 0/0:0:0:0:0:28:0%:51:1E0:48:28:10:18:28 0/0:60:1:1:0:27:3.7%:41:5E-1:48:26:12:14:28 0/1:37:7:0:7:45:15.56%:22:6.0738E-3:40:38:14:24:46 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/1:37:10:1:9:49:20.41%:32:5.8675E-4:45:39:13:26:49 0/0:38:3:0:3:27:11.11%:28:1.1792E-1:45:24:6:18:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:7:23:32 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:28 0/0:0:0:0:0:14:0%:25:1E0:47:14:5:9:16 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:42:0%:77:1E0:46:42:17:25:42 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:6:18:24 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:39 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:42 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:39 0/0:0:0:0:0:24:0%:44:1E0:39:24:7:17:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:20:29:50 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:33 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:26 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:37 0/0:0:0:0:0:50:0%:92:1E0:39:50:20:30:51 0/0:0:0:0:0:55:0%:99:1E0:42:55:32:23:55 0/0:0:0:0:0:45:0%:85:1E0:39:45:14:31:47 0/0:0:0:0:0:39:0%:74:1E0:45:39:14:25:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:44 0/0:0:0:0:0:40:0%:74:1E0:45:40:14:26:40 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:47 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:12:24:37 0/0:48:4:2:2:47:8.51%:53:5.849E-2:40:43:18:25:48 0/0:0:0:0:0:55:0%:99:1E0:42:55:28:27:56 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 MTB_anc 1535150 . CTCATAGTCG C . PASS AC=221;AF=0.737;AN=300;ANN=C|disruptive_inframe_deletion|MODERATE|Rv1363c_Rv1363c|gene1396|transcript|Transcript_gene1396|Coding|1/1|c.234_242delCGACTATGA|p.Asp78_Tyr80del|242/786|234/786|78/261||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1535151_1535159delTCATAGTCG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1535151_1535159delTCATAGTCG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:48:53:21:32:55:96.36%:99:1.6199E-29:34:2:1:1:55 0/1:45:16:4:12:22:72.73%:67:1.7905E-7:43:6:3:3:22 0/1:44:49:21:28:55:89.09%:99:5.6355E-25:40:6:2:4:55 0/1:43:18:12:6:22:78.26%:79:1.1937E-8:45:5:4:1:23 1/1:42:28:13:15:30:93.33%:99:4.194E-15:38:2:0:2:30 1/1:43:29:14:15:32:90.62%:99:3.5714E-15:52:3:2:1:32 1/1:46:28:14:14:30:93.33%:99:4.194E-15:31:2:1:1:30 1/1:41:19:15:4:20:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:43:24:19:42:97.73%:99:1.7144E-24:60:1:0:1:44 1/1:46:25:13:12:25:92.59%:99:5.4444E-14:35:1:0:1:26 0/1:45:28:13:15:33:84.85%:99:6.9527E-14:44:5:2:3:33 1/1:45:55:23:32:59:91.67%:99:8.5493E-29:35:5:1:4:60 1/1:49:18:8:10:19:94.74%:92:5.6585E-10:37:1:0:1:19 1/1:42:44:21:23:44:93.62%:99:1.2056E-23:35:3:0:3:47 0/1:44:27:14:13:32:81.82%:99:4.5192E-13:36:6:5:1:34 1/1:45:42:30:12:45:93.33%:99:1.6658E-22:34:3:3:0:46 1/1:43:24:12:12:24:96%:99:2.0568E-13:34:1:0:1:25 1/1:42:27:16:11:29:93.1%:99:1.5465E-14:46:2:1:1:29 1/1:44:28:11:17:29:90.32%:99:1.2857E-14:36:3:2:1:32 0/1:46:20:9:11:26:76.92%:87:1.8273E-9:43:6:2:4:26 0/1:42:21:12:9:24:84%:97:1.8789E-10:34:4:0:4:25 0/1:44:37:16:21:41:86.05%:99:2.1068E-18:43:6:2:4:43 1/1:44:28:10:18:26:96.55%:99:9.9776E-16:37:1:1:0:29 0/1:45:31:20:11:39:79.49%:99:1.1554E-14:45:8:4:4:39 1/1:43:39:19:20:42:92.86%:99:8.4519E-21:44:3:1:2:42 0/1:47:24:12:12:27:88.89%:99:2.0853E-12:37:3:1:2:27 0/1:43:25:11:14:28:89.29%:99:5.8768E-13:44:3:1:2:28 0/1:47:23:14:9:26:88.46%:99:7.3681E-12:49:3:1:2:27 0/1:44:23:14:9:26:88.46%:99:7.3681E-12:37:3:1:2:26 1/1:46:28:10:18:29:96.55%:99:9.9776E-16:37:1:0:1:29 0/1:45:31:21:10:39:79.49%:99:1.1554E-14:40:8:4:4:39 0/1:45:35:15:20:38:89.74%:99:4.5343E-18:32:4:3:1:39 0/1:47:32:12:20:37:86.49%:99:4.8717E-16:36:5:0:5:37 0/1:42:32:18:14:39:82.05%:99:1.9666E-15:38:7:1:6:39 0/1:44:25:12:13:29:86.21%:99:1.3609E-12:35:4:2:2:29 1/1:44:42:19:23:46:91.3%:99:5.6062E-22:41:4:0:4:46 1/1:43:40:20:20:41:95.24%:99:5.6346E-22:37:2:1:1:43 1/1:46:55:21:34:60:91.67%:99:8.5493E-29:39:5:2:3:61 0/1:48:34:19:15:39:87.18%:99:3.9902E-17:40:5:2:3:39 0/1:44:44:23:21:49:88%:99:3.2182E-22:44:6:4:2:50 0/1:42:45:20:25:50:88.24%:99:9.0809E-23:41:6:5:1:51 0/1:45:36:17:19:41:87.8%:99:3.2269E-18:41:5:0:5:41 0/1:44:23:13:10:25:88.46%:99:7.3681E-12:37:3:1:2:26 0/1:43:27:13:14:31:84.38%:99:2.3785E-13:40:5:1:4:32 1/1:46:37:23:14:40:92.5%:99:1.1479E-19:31:3:1:2:40 1/1:41:37:23:14:39:90.24%:99:1.1479E-19:45:3:1:2:40 0/1:43:21:7:14:25:84%:97:1.8789E-10:36:4:3:1:25 1/1:42:47:21:26:50:94%:99:2.3219E-25:36:3:2:1:50 1/1:43:47:31:16:50:92.16%:99:8.5347E-25:37:4:2:2:52 0/1:44:40:25:15:43:88.89%:99:2.0407E-20:48:5:1:4:46 1/1:40:14:9:5:15:93.33%:69:1.0315E-7:38:1:1:0:16 0/1:43:43:23:20:48:87.76%:99:1.1378E-21:36:6:3:3:49 1/1:42:26:16:10:27:92.86%:99:5.6872E-14:38:2:0:2:28 1/1:43:32:13:19:34:91.43%:99:7.5196E-17:37:3:1:2:35 1/1:42:39:20:19:38:95.12%:99:2.1258E-21:38:2:1:1:41 1/1:42:44:22:22:46:93.62%:99:1.2056E-23:32:3:1:2:48 0/1:42:42:16:26:47:87.5%:99:4.0135E-21:33:6:2:4:48 0/1:46:32:13:19:36:86.49%:99:4.8717E-16:34:5:3:2:37 0/1:45:38:25:13:46:82.61%:99:2.5328E-18:40:8:1:7:46 0/1:48:40:21:19:45:88.89%:99:2.0407E-20:39:5:3:2:45 0/1:37:24:12:12:26:82.76%:99:9.2544E-12:41:5:2:3:29 1/1:45:35:20:15:36:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:43:46:21:25:48:95.83%:99:1.9036E-25:42:2:0:2:48 1/1:49:29:15:14:31:93.55%:99:1.1344E-15:37:2:1:1:31 0/1:46:47:23:24:54:87.04%:99:1.7551E-23:46:7:3:4:55 0/1:49:50:18:32:57:87.72%:99:4.0113E-25:39:7:1:6:57 1/1:47:39:19:20:39:97.5%:99:3.8137E-22:34:1:0:1:40 0/1:44:33:14:19:37:89.19%:99:5.7997E-17:48:4:3:1:37 0/1:47:24:9:15:28:85.71%:99:4.7015E-12:42:4:1:3:28 0/1:44:17:9:8:19:85%:78:1.2848E-8:34:3:2:1:20 1/1:44:33:14:19:35:91.67%:99:2.0653E-17:43:3:0:3:36 1/1:49:22:12:10:24:91.67%:99:1.0078E-11:35:2:1:1:24 0/1:52:16:6:10:19:84.21%:73:4.357E-8:37:3:2:1:20 0/1:45:26:13:13:31:83.87%:99:8.0999E-13:50:5:2:3:31 1/1:43:54:18:36:57:93.1%:99:9.0836E-29:36:4:2:2:59 1/1:44:30:13:17:33:90.91%:99:9.89E-16:38:3:0:3:33 1/1:44:32:20:12:35:94.12%:99:2.2142E-17:36:2:1:1:35 1/1:45:32:19:13:32:96.97%:99:4.7095E-18:66:1:1:0:33 0/1:41:36:11:25:41:87.8%:99:3.2269E-18:45:5:4:1:41 0/1:42:33:16:17:36:89.19%:99:5.7997E-17:37:4:1:3:37 1/1:45:37:23:14:40:92.5%:99:1.1479E-19:36:3:0:3:40 1/1:46:51:23:28:53:94.44%:99:1.1771E-27:32:3:1:2:55 0/1:40:29:17:12:32:87.88%:99:9.1482E-15:36:4:1:3:33 0/1:46:26:13:13:34:76.47%:99:4.1482E-12:40:8:2:6:34 0/1:41:25:16:9:29:86.21%:99:1.3609E-12:31:4:2:2:29 1/1:39:30:14:16:31:90.91%:99:9.89E-16:35:3:2:1:33 1/1:45:29:10:19:32:90.62%:99:3.5714E-15:44:3:1:2:32 1/1:46:21:7:14:23:91.3%:99:3.6437E-11:37:2:0:2:23 0/1:48:26:17:9:31:83.87%:99:8.0999E-13:39:5:4:1:31 1/1:47:29:14:15:32:90.62%:99:3.5714E-15:40:3:1:2:32 0/1:46:29:19:10:32:87.88%:99:9.1482E-15:39:4:1:3:33 1/1:49:28:15:13:30:90.32%:99:1.2857E-14:42:3:0:3:31 0/1:43:52:15:37:58:89.66%:99:1.2208E-26:39:6:3:3:58 0/1:40:34:14:20:38:87.18%:99:3.9902E-17:36:5:2:3:39 0/1:44:45:26:19:53:83.33%:99:9.5212E-22:41:9:1:8:54 1/1:46:24:13:11:26:92.31%:99:7.6222E-13:49:2:1:1:26 0/1:42:18:9:9:21:85.71%:84:3.7603E-9:33:3:2:1:21 1/1:42:31:17:14:30:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:18:22:42:90.91%:99:7.413E-21:35:4:1:3:44 0/1:43:27:11:16:30:87.1%:99:1.125E-13:42:4:2:2:31 0/1:43:25:12:13:29:83.33%:99:2.745E-12:44:5:2:3:30 1/1:43:36:19:17:38:92.31%:99:4.2179E-19:37:3:2:1:39 0/1:42:29:20:9:33:87.88%:99:9.1482E-15:39:4:2:2:33 0/1:41:27:16:11:30:87.1%:99:1.125E-13:33:4:3:1:31 0/1:41:20:13:7:22:86.96%:95:3.1579E-10:43:3:1:2:24 0/1:45:22:9:13:26:84.62%:99:5.5261E-11:43:4:2:2:26 0/1:45:29:17:12:33:87.88%:99:9.1482E-15:37:4:3:1:33 1/1:44:39:23:16:42:92.86%:99:8.4519E-21:43:3:1:2:42 0/1:45:16:9:7:21:76.19%:69:1.2221E-7:37:5:2:3:22 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:16:11:26:93.1%:99:1.5465E-14:54:2:1:1:30 0/1:45:34:17:17:38:89.47%:99:1.6239E-17:35:4:0:4:38 0/1:38:23:15:8:25:88.46%:99:7.3681E-12:37:3:0:3:26 0/1:46:29:15:14:36:80.56%:99:7.2821E-14:39:7:4:3:36 1/1:40:29:15:14:32:90.62%:99:3.5714E-15:36:3:0:3:32 0/1:39:31:16:15:36:86.11%:99:1.6935E-15:36:5:2:3:36 1/1:42:29:14:15:32:90.62%:99:3.5714E-15:35:3:0:3:32 0/1:42:34:17:17:38:89.47%:99:1.6239E-17:35:4:0:4:38 1/1:45:32:14:18:34:94.12%:99:2.2142E-17:33:2:0:2:34 1/1:44:53:21:32:57:92.98%:99:3.3697E-28:36:4:4:0:58 0/1:42:41:21:20:46:89.13%:99:5.7183E-21:35:5:2:3:47 0/1:40:25:12:13:28:86.21%:99:1.3609E-12:36:4:2:2:29 0/1:41:24:11:13:34:70.59%:99:8.7205E-11:36:10:4:6:35 1/1:36:31:15:16:33:91.18%:99:2.7308E-16:44:3:1:2:34 0/1:38:30:15:15:34:85.71%:99:5.8653E-15:35:5:1:4:35 0/1:41:41:20:21:47:85.42%:99:3.1535E-20:37:7:3:4:48 0/1:41:37:21:16:42:88.1%:99:9.1365E-19:37:5:3:2:42 1/1:42:46:23:23:48:93.88%:99:8.6743E-25:44:3:1:2:49 0/1:40:39:21:18:43:88.64%:99:7.2647E-20:35:5:2:3:44 0/1:41:39:18:21:47:82.98%:99:7.4895E-19:35:8:1:7:47 1/1:38:30:16:14:31:90.91%:99:9.89E-16:34:3:3:0:33 1/1:39:48:20:28:52:90.57%:99:7.3051E-25:36:5:1:4:55 1/1:40:37:19:18:40:92.5%:99:1.1479E-19:37:3:2:1:40 1/1:38:39:22:17:41:92.86%:99:8.4519E-21:37:3:0:3:42 0/1:45:24:10:14:28:80%:99:1.647E-11:37:6:2:4:30 0/1:46:28:14:14:35:80%:99:2.4048E-13:40:7:4:3:36 0/1:36:55:28:27:63:85.94%:99:4.0533E-27:39:9:2:7:64 0/1:44:28:14:14:36:77.78%:99:4.0051E-13:39:8:2:6:36 1/1:43:31:15:16:33:91.18%:99:2.7308E-16:36:3:1:2:34 1/1:42:37:22:15:40:90.24%:99:3.5075E-19:32:4:0:4:41 0/1:43:22:10:12:25:81.48%:99:1.0343E-10:41:5:1:4:27 1/1:38:37:21:16:40:92.5%:99:1.1479E-19:32:3:0:3:40 1/1:43:28:14:14:29:96.55%:99:9.9776E-16:33:1:0:1:29 0/1:47:33:17:16:37:89.19%:99:5.7997E-17:32:4:1:3:37 0/1:40:31:19:12:36:86.11%:99:1.6935E-15:37:5:2:3:36 1/1:44:23:16:7:23:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:44:29:11:18:30:93.55%:99:1.1344E-15:37:2:1:1:31 1/1:44:46:26:20:51:90.2%:99:9.5589E-24:36:5:4:1:51 1/1:40:49:20:29:51:90.74%:99:2.014E-25:38:5:2:3:54 0/1:41:33:16:17:36:89.19%:99:5.7997E-17:36:4:2:2:37 MTB_anc 1540141 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1367c_Rv1367c|gene1402|transcript|Transcript_gene1402|Coding|1/1|c.505G>A|p.Val169Ile|505/1134|505/1134|169/377||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1540141C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1540141C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:54:17:37:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:50:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:60:24:36:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:53:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:63:20:43:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:48:21:27:49:97.96%:99:1.554E-28:0:0:0:0:49 1/1:44:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:55:18:37:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:53:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:63:25:38:63:100%:99:1.657E-37:0:0:0:0:63 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:53:18:35:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:49:19:30:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:65:26:39:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:41:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 1541074 . A C . PASS AC=4;AF=0.013;AN=300;ANN=C|missense_variant|MODERATE|lprF_Rv1368|gene1403|transcript|Transcript_gene1403|Coding|1/1|c.55A>C|p.Ser19Arg|55/786|55/786|19/261||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1541074A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1541074A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:44 0/0:0:0:0:0:18:0%:32:1E0:52:18:10:8:19 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:0:0:0:0:27:0%:52:1E0:50:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:19 0/0:0:0:0:0:32:0%:59:1E0:51:32:19:13:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:24 0/0:0:0:0:0:44:0%:81:1E0:47:44:24:20:45 0/0:0:0:0:0:14:0%:25:1E0:51:14:3:11:14 0/0:0:0:0:0:43:0%:82:1E0:47:43:26:17:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:41 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:24 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:32 0/0:0:0:0:0:37:0%:70:1E0:48:37:22:15:38 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:38 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:45 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:39 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:48:36:21:15:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:19:11:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:55:0%:99:1E0:45:55:27:28:55 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:40 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:40 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:42 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:43 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:13:0%:25:1E0:54:13:9:4:13 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:42 0/0:0:0:0:0:17:0%:33:1E0:46:17:12:5:18 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:34 0/0:0:0:0:0:15:0%:29:1E0:41:15:5:10:15 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:36:0%:66:1E0:47:36:22:14:37 0/0:0:0:0:0:22:0%:40:1E0:46:22:15:7:24 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:43 0/0:0:0:0:0:49:0%:93:1E0:49:49:25:24:49 0/0:0:0:0:0:42:0%:77:1E0:46:42:26:16:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:55:0%:99:1E0:44:55:28:27:57 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:45:0%:85:1E0:47:45:24:21:45 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:16:0%:29:1E0:48:16:12:4:16 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:18:0%:32:1E0:51:18:9:9:18 0/0:0:0:0:0:42:0%:77:1E0:46:42:17:25:43 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:48 0/0:0:0:0:0:27:0%:52:1E0:41:27:18:9:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:30 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:48 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:29 0/0:0:0:0:0:38:0%:70:1E0:50:38:15:23:39 0/0:0:0:0:0:28:0%:51:1E0:49:28:10:18:29 0/0:0:0:0:0:48:0%:89:1E0:47:48:27:21:48 0/0:0:0:0:0:23:0%:44:1E0:49:23:11:12:23 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:55 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:48 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:37:0%:70:1E0:46:37:10:27:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:39 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:51:0%:97:1E0:41:51:22:29:53 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:50 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:24 0/0:0:0:0:0:53:0%:99:1E0:41:53:34:19:55 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:50 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:39 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:48 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:36 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:52:0%:96:1E0:40:52:28:24:56 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:40 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:41 0/0:0:0:0:0:31:0%:59:1E0:39:31:9:22:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:22 0/0:0:0:0:0:62:0%:99:1E0:40:62:26:36:66 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:41 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:45 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:48 0/0:0:0:0:0:53:0%:99:1E0:43:53:32:21:53 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:49 MTB_anc 1544255 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv1371_Rv1371|gene1404|transcript|Transcript_gene1404|Coding|1/1|c.897T>C|p.Arg299Arg|897/1470|897/1470|299/489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1544255T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1544255T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:33:13:20:34:97.06%:99:1.2301E-18:36:1:1:0:34 1/1:50:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:37:22:15:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:52:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:52:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:54:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:38:16:22:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:49:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:61:30:31:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:41:20:21:42:97.62%:99:2.5612E-23:32:1:1:0:44 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:63:30:33:63:100%:99:1.657E-37:0:0:0:0:67 1/1:46:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 MTB_anc 1546703 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1373_Rv1373|gene1406|transcript|Transcript_gene1406|Coding|1/1|c.692T>C|p.Leu231Pro|692/981|692/981|231/326||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1546703T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1546703T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:20:12:8:21:95.24%:99:4.0873E-11:60:1:1:0:22 1/1:45:53:36:17:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:44:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:45:25:20:46:97.83%:99:1.1441E-25:60:1:1:0:47 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:29:19:10:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:52:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:71:33:38:71:100%:99:2.6835E-42:0:0:0:0:72 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:37:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:36:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:37:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:41:21:20:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:70:34:36:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 1548087 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1375_Rv1375|gene1409|transcript|Transcript_gene1409|Coding|1/1|c.256A>G|p.Arg86Gly|256/1320|256/1320|86/439||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1548087A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1548087A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:53:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:52:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:20:12:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:44:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:55:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:14:13:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:50:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:30:11:19:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:24:15:9:26:92.31%:99:3.101E-14:0:0:0:0:26 1/1:48:35:16:19:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:60:25:35:60:100%:99:1.035E-35:0:0:0:0:61 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:54:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:28:15:13:30:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:27:20:7:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:38:20:18:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:36:21:15:37:97.3%:99:2.1762E-20:37:1:0:1:37 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:48:17:31:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:47:27:20:48:97.92%:99:7.6145E-27:39:1:0:1:48 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:72:39:33:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:15:18:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:56:26:30:57:98.25%:99:2.5602E-33:0:0:0:0:58 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 1558108 . C T . PASS AC=40;AF=0.133;AN=300;ANN=T|synonymous_variant|LOW|carB_Rv1384|gene1418|transcript|Transcript_gene1418|Coding|1/1|c.1008C>T|p.Thr336Thr|1008/3348|1008/3348|336/1115||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1558108C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1558108C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:57:0%:99:1E0:44:57:25:32:58 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:53:0%:99:1E0:45:53:35:18:53 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:17 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:32 0/0:0:0:0:0:29:0%:55:1E0:54:29:9:20:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:50 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 1/1:46:48:17:31:48:100%:99:1.554E-28:0:0:0:0:52 0/0:0:0:0:0:24:0%:44:1E0:45:24:17:7:26 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:46 0/0:38:1:0:1:23:4.35%:34:5E-1:46:22:8:14:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:26:0%:47:1E0:48:26:20:6:26 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:38:1:0:1:28:3.57%:41:5E-1:45:27:21:6:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 1/1:46:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:14:0%:25:1E0:51:14:6:8:14 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:60:1:0:1:27:3.7%:41:5E-1:40:26:14:12:28 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:50:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:54:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:42 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:32 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:37 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:44:0%:81:1E0:47:44:22:22:45 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:65:0%:99:1E0:44:65:32:33:66 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:26 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 1/1:43:25:16:9:26:96.15%:99:5.4444E-14:38:1:0:1:26 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:28:0%:51:1E0:51:28:20:8:29 1/1:48:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:39:0%:74:1E0:49:39:21:18:39 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:46 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:22 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:23:0%:44:1E0:44:23:7:16:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:30 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:51 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:20:5:25 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:49:33:14:19:33 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:28 0/0:38:1:0:1:28:3.57%:41:5E-1:39:27:5:22:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:43 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:40:0%:74:1E0:43:40:14:26:40 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:9:14:23 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:44 0/0:0:0:0:0:24:0%:44:1E0:42:24:6:18:24 0/0:0:0:0:0:44:0%:81:1E0:45:44:14:30:44 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:62:0%:99:1E0:41:62:28:34:62 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:53 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:30 0/0:0:0:0:0:55:0%:99:1E0:38:55:23:32:56 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:18:28:46 0/0:0:0:0:0:41:0%:78:1E0:37:41:19:22:43 0/0:0:0:0:0:55:0%:99:1E0:43:55:23:32:56 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:40 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:33 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:46 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:37 0/0:0:0:0:0:52:0%:96:1E0:41:52:25:27:55 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:41 0/0:39:1:1:0:38:2.63%:58:5E-1:42:37:17:20:38 1/1:38:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:57 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:53 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:49 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:35 0/0:0:0:0:0:46:0%:85:1E0:43:46:15:31:46 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:23 0/0:0:0:0:0:43:0%:82:1E0:45:43:14:29:44 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:43 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 MTB_anc 1559562 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|carB_Rv1384|gene1418|transcript|Transcript_gene1418|Coding|1/1|c.2462A>C|p.Glu821Ala|2462/3348|2462/3348|821/1115||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1559562A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1559562A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:21:9:12:22:95.45%:99:1.0931E-11:34:1:0:1:23 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:48:12:36:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:31:9:22:32:96.88%:99:1.8007E-17:38:1:0:1:32 1/1:44:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:28:10:18:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:23:3:20:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:25:4:21:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 MTB_anc 1567583 . C T . PASS AC=30;AF=0.100;AN=300;ANN=T|synonymous_variant|LOW|metK_Rv1392|gene1426|transcript|Transcript_gene1426|Coding|1/1|c.759C>T|p.Leu253Leu|759/1212|759/1212|253/403||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1567583C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1567583C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:40:54:40:14:54 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:50:0%:92:1E0:43:50:31:19:51 0/0:0:0:0:0:24:0%:44:1E0:40:24:21:3:24 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:49:31:11:20:32 0/0:0:0:0:0:18:0%:32:1E0:40:18:13:5:19 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:18:6:25 0/0:0:0:0:0:35:0%:67:1E0:38:35:28:7:36 0/0:0:0:0:0:9:0%:18:1E0:41:9:4:5:10 0/0:0:0:0:0:49:0%:93:1E0:39:49:32:17:51 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/0:0:0:0:0:17:0%:33:1E0:39:17:13:4:17 0/0:0:0:0:0:29:0%:55:1E0:38:29:20:9:29 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:16 0/0:0:0:0:0:31:0%:59:1E0:39:31:21:10:33 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:24 0/0:0:0:0:0:43:0%:82:1E0:39:43:29:14:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:23:10:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:17:0%:33:1E0:43:17:13:4:17 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:18:8:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:22:7:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:28:8:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:23:9:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 0/0:37:1:1:0:34:2.94%:51:5E-1:40:33:19:14:35 0/0:0:0:0:0:68:0%:99:1E0:42:68:39:29:70 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:34 0/0:0:0:0:0:42:0%:77:1E0:40:42:27:15:43 0/0:0:0:0:0:41:0%:78:1E0:39:41:27:14:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:25 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:34 0/0:0:0:0:0:41:0%:78:1E0:37:41:25:16:42 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:46:0%:85:1E0:39:46:30:16:46 0/0:0:0:0:0:47:0%:89:1E0:39:47:34:13:48 0/0:0:0:0:0:38:0%:70:1E0:40:38:27:11:38 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:17 0/0:0:0:0:0:49:0%:93:1E0:41:49:34:15:50 0/0:0:0:0:0:18:0%:32:1E0:43:18:12:6:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:38 0/0:0:0:0:0:44:0%:81:1E0:40:44:30:14:50 0/0:0:0:0:0:27:0%:52:1E0:37:27:19:8:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:28 0/0:0:0:0:0:45:0%:85:1E0:40:45:32:13:45 0/0:0:0:0:0:30:0%:55:1E0:40:29:18:11:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:27:9:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:42 0/0:0:0:0:0:54:0%:99:1E0:39:54:38:16:54 0/0:0:0:0:0:32:0%:59:1E0:41:32:23:9:32 0/0:0:0:0:0:46:0%:85:1E0:39:46:29:17:47 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:17:0%:33:1E0:43:17:13:4:17 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:21:6:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:29 0/0:0:0:0:0:22:0%:40:1E0:41:22:17:5:23 0/0:0:0:0:0:46:0%:85:1E0:39:46:31:15:46 0/0:0:0:0:0:41:0%:78:1E0:41:41:27:14:43 0/0:0:0:0:0:30:0%:55:1E0:40:30:24:6:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:18:6:25 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:34 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:20 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:32 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:17 0/0:0:0:0:0:43:0%:82:1E0:38:43:25:18:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:33 0/0:0:0:0:0:42:0%:77:1E0:40:42:25:17:43 0/0:0:0:0:0:19:0%:37:1E0:37:19:14:5:20 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:26:0%:47:1E0:38:26:20:6:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:19:2:22 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:23:0%:44:1E0:36:23:18:5:23 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:22:4:27 0/0:0:0:0:0:44:0%:81:1E0:37:44:34:10:45 0/0:0:0:0:0:22:0%:40:1E0:39:22:16:6:23 0/0:0:0:0:0:36:0%:66:1E0:39:36:26:10:36 0/0:0:0:0:0:20:0%:36:1E0:37:20:16:4:22 0/0:0:0:0:0:45:0%:85:1E0:40:45:30:15:47 0/0:0:0:0:0:54:0%:99:1E0:40:54:30:24:55 1/1:39:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:17:0%:33:1E0:38:17:12:5:19 0/0:0:0:0:0:40:0%:74:1E0:38:40:33:7:41 0/0:0:0:0:0:32:0%:59:1E0:37:32:25:7:33 0/0:0:0:0:0:43:0%:82:1E0:38:43:32:11:44 0/0:0:0:0:0:28:0%:51:1E0:36:28:16:12:29 0/0:0:0:0:0:43:0%:82:1E0:38:43:32:11:43 1/1:37:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:44:0%:81:1E0:38:44:35:9:44 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:32 0/0:0:0:0:0:37:0%:70:1E0:38:37:27:10:38 0/0:0:0:0:0:36:0%:66:1E0:37:36:26:10:38 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:43 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:14:8:22 0/0:0:0:0:0:64:0%:99:1E0:38:64:47:17:65 0/0:39:1:1:0:32:3.12%:48:5E-1:39:31:22:9:32 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:34 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:25 0/0:0:0:0:0:29:0%:55:1E0:37:29:18:11:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:23:8:31 0/0:0:0:0:0:42:0%:77:1E0:37:42:21:21:42 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:41:39:27:12:39 0/0:0:0:0:0:41:0%:78:1E0:40:41:31:10:42 0/0:38:1:0:1:27:3.7%:41:5E-1:37:26:20:6:29 MTB_anc 1572322 . G A . PASS AC=276;AF=1.00;AN=276;ANN=A|synonymous_variant|LOW|PE_PGRS25_Rv1396c|gene1430|transcript|Transcript_gene1430|Coding|1/1|c.1536C>T|p.Asn512Asn|1536/1731|1536/1731|512/576||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1572322G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1572322G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:31:26:5:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 ./. 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:16:10:6:17:94.12%:81:7.7134E-9:37:1:1:0:18 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 MTB_anc 1572851 . G T . PASS AC=236;AF=1.00;AN=236;ANN=T|missense_variant|MODERATE|PE_PGRS25_Rv1396c|gene1430|transcript|Transcript_gene1430|Coding|1/1|c.1007C>A|p.Thr336Asn|1007/1731|1007/1731|336/576||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1572851G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1572851G>T||||||;HET=0;WT=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:24:21:3:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:34:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:20:20:0:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:22:18:4:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:22:21:1:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:20:20:0:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:20:20:0:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:32:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:32:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:31:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:14:14:0:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 MTB_anc 1572959 . T C . PASS AC=244;AF=1.00;AN=244;ANN=C|missense_variant|MODERATE|PE_PGRS25_Rv1396c|gene1430|transcript|Transcript_gene1430|Coding|1/1|c.899A>G|p.His300Arg|899/1731|899/1731|300/576||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1572959T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1572959T>C||||||;HET=0;WT=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:24:22:2:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:8:4:13:100%:64:3.698E-7:0:0:0:0:13 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:20:19:1:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:16:13:3:17:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:24:21:3:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:20:20:0:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:18:15:3:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 1573380 . GC G . PASS AC=282;AF=0.972;AN=290;ANN=G|frameshift_variant|HIGH|PE_PGRS25_Rv1396c|gene1430|transcript|Transcript_gene1430|Coding|1/1|c.477delG|p.Leu160fs|477/1731|477/1731|159/576||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1573381delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1573381delC||||||;LOF=(PE_PGRS25_Rv1396c|gene1430|1|1.00);WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:21:13:8:21:95.45%:99:1.0931E-11:37:1:1:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:19:10:9:19:95%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:11:3:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:12:8:4:11:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 0/1:37:11:5:6:13:84.62%:49:1.0096E-5:35:2:1:1:13 1/1:37:11:10:1:10:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:24:17:7:23:100%:99:3.101E-14:0:0:0:0:24 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:26:18:8:25:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:19:15:4:19:95%:98:1.5234E-10:32:1:0:1:20 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:8:7:1:7:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:12:10:2:13:92.31%:58:1.3461E-6:32:1:0:1:13 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:32:12:7:5:11:92.31%:58:1.3461E-6:33:1:0:1:13 1/1:36:19:13:6:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:9:7:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:33:8:6:2:7:100%:41:7.77E-5:0:0:0:0:8 1/1:35:20:12:8:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:17:11:6:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:28:18:10:28:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:37:29:17:12:30:96.67%:99:2.6212E-16:26:1:1:0:30 1/1:36:18:13:5:17:100%:99:1.1019E-10:0:0:0:0:19 1/1:32:14:9:5:11:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:21:12:9:21:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:33:16:11:5:14:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:22:13:9:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:24:15:9:23:100%:99:3.101E-14:0:0:0:0:24 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:11:7:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:37:27:20:7:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:20:12:8:18:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:7:4:11:91.67%:53:4.8074E-6:37:1:1:0:13 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:15:9:6:16:93.75%:75:2.8282E-8:37:1:1:0:16 1/1:34:22:20:2:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:22:16:6:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:34:16:12:4:16:94.12%:81:7.7134E-9:33:1:0:1:17 1/1:33:22:15:7:18:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:21:18:3:19:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:36:18:14:4:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:38:16:9:7:18:88.89%:76:2.0936E-8:34:2:1:1:18 1/1:35:25:17:8:25:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:20:9:11:22:90.91%:98:1.3117E-10:28:2:1:1:22 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:23:13:10:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:16:12:4:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 0/1:36:20:12:8:21:86.96%:98:1.3117E-10:38:2:1:1:23 1/1:36:19:15:4:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:10:1:12:91.67%:53:4.8074E-6:36:1:1:0:12 1/1:36:13:8:5:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:6:3:10:90%:42:5.9538E-5:37:1:1:0:10 1/1:37:26:19:7:28:92.86%:99:5.6872E-14:35:2:1:1:28 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:26:20:6:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:28:22:6:29:96.55%:99:9.9776E-16:33:1:0:1:29 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:19:12:7:17:95%:98:1.5234E-10:37:1:1:0:20 1/1:35:16:9:7:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:21:14:7:19:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:16:10:6:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:19:13:6:18:95%:98:1.5234E-10:37:1:1:0:20 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 0/1:36:16:12:4:18:88.89%:76:2.0936E-8:29:2:1:1:18 1/1:36:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:15:9:6:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:15:9:6:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:19:15:4:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:35:21:14:38:92.11%:99:1.5466E-18:34:3:1:2:38 1/1:37:22:14:8:23:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:37:20:16:4:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:33:17:15:2:15:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:32:20:18:2:16:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:16:12:4:13:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:24:16:8:23:100%:99:3.101E-14:0:0:0:0:24 1/1:35:9:7:2:8:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:22:18:4:24:91.67%:99:1.0078E-11:34:2:1:1:24 0/1:36:15:11:4:17:88.24%:71:7.3277E-8:37:2:2:0:17 1/1:34:17:13:4:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:15:11:4:14:93.75%:75:2.8282E-8:37:1:1:0:16 1/1:35:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:32:10:10:0:8:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:32:9:4:5:7:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:11:10:1:10:100%:58:1.4176E-6:0:0:0:0:11 0/1:38:7:7:0:8:87.5%:31:6.993E-4:33:1:1:0:8 1/1:33:17:11:6:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:10:8:2:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:16:13:3:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:23:18:5:21:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:24:19:5:22:100%:99:3.101E-14:0:0:0:0:24 1/1:37:18:12:6:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:18:13:5:19:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:11:6:5:10:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:14:9:5:12:100%:76:2.4927E-8:0:0:0:0:14 0/1:36:8:5:3:9:88.89%:36:2.0568E-4:37:1:1:0:9 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:22:15:7:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 0/1:34:15:12:3:16:88.24%:71:7.3277E-8:37:2:2:0:17 MTB_anc 1573448 . C T . PASS AC=296;AF=1.00;AN=296;ANN=T|missense_variant|MODERATE|PE_PGRS25_Rv1396c|gene1430|transcript|Transcript_gene1430|Coding|1/1|c.410G>A|p.Cys137Tyr|410/1731|410/1731|137/576||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1573448C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1573448C>T||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:33:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:12:11:1:12:100%:64:3.698E-7:0:0:0:0:15 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:33:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:35:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:36:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:34:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:35:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:34:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:33:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:30 1/1:34:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:24:15:9:24:100%:99:3.101E-14:0:0:0:0:30 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:34:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:34:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:34:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:34:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:16 1/1:36:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:16:12:4:17:94.12%:81:7.7134E-9:38:1:0:1:20 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:34:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 MTB_anc 1574206 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|vapC10_Rv1397c|gene1431|transcript|Transcript_gene1431|Coding|1/1|c.308G>A|p.Gly103Asp|308/402|308/402|103/133||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1574206C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.1574206C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:52:36:17:19:37:97.3%:99:2.1762E-20:60:1:0:1:37 1/1:47:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:39:21:18:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:66:39:27:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:69:36:33:69:100%:99:4.233E-41:0:0:0:0:69 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:50:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:51:28:23:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:43:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:50:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:41 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:61:30:31:61:100%:99:2.609E-36:0:0:0:0:64 1/1:44:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:48 MTB_anc 1577404 . A G . PASS AC=68;AF=0.227;AN=300;ANN=G|missense_variant|MODERATE|Rv1401_Rv1401|gene1435|transcript|Transcript_gene1435|Coding|1/1|c.475A>G|p.Ile159Val|475/603|475/603|159/200||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1577404A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1577404A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:41 0/0:0:0:0:0:11:0%:22:1E0:49:11:5:6:11 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:50 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:33 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:24:0%:44:1E0:50:24:16:8:24 0/0:0:0:0:0:21:0%:40:1E0:48:21:15:6:23 0/0:0:0:0:0:42:0%:77:1E0:43:42:14:28:47 0/0:0:0:0:0:10:0%:17:1E0:46:10:7:3:12 0/0:0:0:0:0:45:0%:85:1E0:42:45:27:18:47 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:30 0/0:0:0:0:0:17:0%:33:1E0:46:17:5:12:17 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:59:0%:99:1E0:41:59:34:25:60 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:35 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:0:0:0:0:13:0%:25:1E0:41:13:6:7:13 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:15 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:31 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:40 0/0:0:0:0:0:60:0%:99:1E0:44:60:28:32:64 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:40 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:12:28:43 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:47 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:44 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:47 0/0:0:0:0:0:41:0%:78:1E0:49:41:20:21:42 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:48:0%:89:1E0:44:48:21:27:51 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:17 0/0:0:0:0:0:51:0%:97:1E0:44:51:24:27:52 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:17:28:46 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:45:0%:85:1E0:44:45:13:32:46 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:44 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:39 0/0:0:0:0:0:58:0%:99:1E0:45:58:32:26:59 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:48 0/0:0:0:0:0:15:0%:29:1E0:49:15:9:6:15 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:29 0/0:0:0:0:0:34:0%:62:1E0:49:34:15:19:34 0/0:60:1:0:1:25:4%:38:5E-1:46:24:13:11:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:36 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:52 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:34 1/1:39:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:24 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:50:28:17:11:28 0/0:0:0:0:0:45:0%:85:1E0:40:45:29:16:45 0/0:38:1:1:0:38:2.63%:58:5E-1:45:37:15:22:39 0/0:0:0:0:0:49:0%:93:1E0:45:49:29:20:50 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:39 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:39 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:35 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 1/1:37:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:54:0%:99:1E0:44:54:29:25:55 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:39 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:27 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:35 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:31 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:33:0%:63:1E0:39:33:11:22:37 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:21 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:32 0/0:0:0:0:0:49:0%:93:1E0:38:49:21:28:51 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:37 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:13:26:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 MTB_anc 1583276 . C G . PASS AC=14;AF=0.048;AN=292;ANN=G|missense_variant|MODERATE|fmu_Rv1407|gene1441|transcript|Transcript_gene1441|Coding|1/1|c.176C>G|p.Thr59Arg|176/1374|176/1374|59/457||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1583276C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1583276C>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:36:32:10:22:35 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:10 0/0:0:0:0:0:23:0%:44:1E0:36:23:3:20:27 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:10 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:13 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:15 0/0:0:0:0:0:13:0%:25:1E0:37:13:1:12:15 0/0:0:0:0:0:14:0%:25:1E0:34:14:2:12:15 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:13 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:20 0/0:0:0:0:0:8:0%:14:1E0:34:8:3:5:10 0/0:0:0:0:0:16:0%:29:1E0:36:16:5:11:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:23 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:23 0/0:0:0:0:0:14:0%:25:1E0:35:14:4:10:17 0/0:0:0:0:0:14:0%:25:1E0:37:14:2:12:14 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:9 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:14 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:16 0/0:0:0:0:0:10:0%:17:1E0:34:10:0:10:12 0/0:0:0:0:0:27:0%:52:1E0:37:27:7:20:27 0/0:0:0:0:0:12:0%:21:1E0:40:12:4:8:13 0/0:0:0:0:0:17:0%:33:1E0:37:17:1:16:17 0/0:0:0:0:0:21:0%:40:1E0:37:21:5:16:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:36:13:3:10:16 0/0:0:0:0:0:12:0%:21:1E0:37:12:3:9:12 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:23 0/0:0:0:0:0:27:0%:52:1E0:37:27:9:18:28 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:23 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:9 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:17 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:30 0/0:0:0:0:0:24:0%:44:1E0:36:24:7:17:24 0/0:0:0:0:0:27:0%:52:1E0:36:27:6:21:29 0/0:0:0:0:0:22:0%:40:1E0:34:22:1:21:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:3:16:19 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:22 0/0:0:0:0:0:27:0%:52:1E0:37:27:5:22:28 0/0:0:0:0:0:16:0%:29:1E0:35:16:3:13:17 0/0:0:0:0:0:24:0%:44:1E0:36:24:4:20:26 0/0:0:0:0:0:17:0%:33:1E0:34:17:4:13:19 0/0:0:0:0:0:17:0%:33:1E0:36:17:8:9:19 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:19 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:24 0/0:0:0:0:0:20:0%:36:1E0:36:20:3:17:23 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:24 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:9 0/0:0:0:0:0:26:0%:47:1E0:36:26:6:20:31 0/0:0:0:0:0:7:0%:14:1E0:35:7:1:6:7 0/0:0:0:0:0:19:0%:37:1E0:34:19:5:14:20 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:15 0/0:0:0:0:0:28:0%:51:1E0:35:28:8:20:28 0/0:0:0:0:0:26:0%:47:1E0:37:26:7:19:26 0/0:0:0:0:0:19:0%:37:1E0:36:19:5:14:19 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:22 0/0:0:0:0:0:30:0%:55:1E0:37:30:6:24:33 0/0:0:0:0:0:20:0%:36:1E0:37:20:5:15:21 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:18 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:13 0/0:0:0:0:0:13:0%:25:1E0:36:13:3:10:15 0/0:0:0:0:0:24:0%:44:1E0:35:24:6:18:25 0/0:0:0:0:0:18:0%:32:1E0:35:18:2:16:23 0/0:0:0:0:0:15:0%:29:1E0:36:15:8:7:18 0/0:0:0:0:0:32:0%:59:1E0:36:32:10:22:34 0/0:0:0:0:0:15:0%:29:1E0:35:15:4:11:16 0/0:0:0:0:0:9:0%:18:1E0:40:9:3:6:10 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:12 0/0:0:0:0:0:12:0%:21:1E0:39:12:2:10:15 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:20:0%:36:1E0:36:20:3:17:21 0/0:0:0:0:0:18:0%:32:1E0:36:18:3:15:18 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:18 0/0:0:0:0:0:14:0%:25:1E0:37:14:0:14:16 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:19 0/0:0:0:0:0:18:0%:32:1E0:35:18:2:16:18 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:14 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:11 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:24 0/0:0:0:0:0:10:0%:17:1E0:38:10:6:4:11 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:13 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:14 0/0:0:0:0:0:20:0%:36:1E0:35:20:5:15:20 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:21 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:13 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:21 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:13 0/0:0:0:0:0:16:0%:29:1E0:38:16:2:14:17 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:17 0/0:0:0:0:0:19:0%:37:1E0:35:19:6:13:23 0/0:37:1:0:1:19:5.26%:28:5E-1:36:18:5:13:20 0/0:0:0:0:0:19:0%:37:1E0:35:19:6:13:20 0/0:0:0:0:0:12:0%:21:1E0:35:12:1:11:12 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:13 1/1:35:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:14 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:18 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:13 0/0:0:0:0:0:7:0%:14:1E0:35:7:1:6:8 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:16 0/0:0:0:0:0:24:0%:44:1E0:36:24:9:15:25 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:12 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:17 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:17 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:16 0/0:0:0:0:0:14:0%:25:1E0:36:14:2:12:16 0/0:0:0:0:0:21:0%:40:1E0:35:21:2:19:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:17:0%:33:1E0:36:17:4:13:20 0/0:0:0:0:0:32:0%:59:1E0:36:32:7:25:38 0/0:0:0:0:0:20:0%:36:1E0:37:20:4:16:22 0/0:0:0:0:0:7:0%:14:1E0:33:7:0:7:9 0/0:0:0:0:0:21:0%:40:1E0:34:21:7:14:22 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:14 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:13 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:14 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:22 0/0:0:0:0:0:12:0%:21:1E0:39:12:5:7:15 0/0:0:0:0:0:13:0%:25:1E0:35:13:1:12:15 0/0:0:0:0:0:11:0%:22:1E0:38:11:4:7:13 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:17 0/0:0:0:0:0:26:0%:47:1E0:36:26:7:19:26 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:18 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:12 0/0:0:0:0:0:17:0%:33:1E0:36:17:1:16:18 0/0:0:0:0:0:26:0%:47:1E0:35:26:8:18:30 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:15 0/0:0:0:0:0:11:0%:22:1E0:36:11:2:9:11 0/0:0:0:0:0:19:0%:37:1E0:36:19:6:13:20 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:15 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:11 0/0:37:1:0:1:18:5.56%:24:5E-1:36:17:6:11:21 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:5:15:22 0/0:0:0:0:0:12:0%:21:1E0:35:12:4:8:12 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:16 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:14 0/0:0:0:0:0:33:0%:63:1E0:36:33:6:27:38 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:20 MTB_anc 1584379 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|fmu_Rv1407|gene1441|transcript|Transcript_gene1441|Coding|1/1|c.1279C>A|p.Leu427Ile|1279/1374|1279/1374|427/457||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1584379C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1584379C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:49:15:34:49:100%:99:3.925E-29:0:0:0:0:53 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:72:27:45:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:49:24:25:50:98%:99:5.0549E-28:33:1:0:1:50 1/1:43:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:13:25:39:97.44%:99:1.4508E-22:0:0:0:0:41 1/1:50:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 1585283 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|ribG_Rv1409|gene1443|transcript|Transcript_gene1443|Coding|1/1|c.90C>A|p.Asn30Lys|90/1020|90/1020|30/339||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1585283C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1585283C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:52:16:36:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:48 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:30:17:13:31:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:49:22:27:50:100%:99:3.925E-29:0:0:0:0:50 1/1:40:34:10:24:35:97.14%:99:3.5146E-20:0:0:0:0:38 1/1:38:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:39:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:51 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:14 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:42:9:33:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:18:6:12:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:29:10:19:30:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:37:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:35:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:36:24:11:13:24:100%:99:3.101E-14:0:0:0:0:29 1/1:38:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:36:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:37:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:36:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:34:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:34:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:34:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:36:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:36:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:35:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:51 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:34:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:51:14:37:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:35:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 MTB_anc 1585404 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|ribG_Rv1409|gene1443|transcript|Transcript_gene1443|Coding|1/1|c.211A>G|p.Thr71Ala|211/1020|211/1020|71/339||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1585404A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1585404A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:52:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:48:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:26:7:19:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:52:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:54:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:39:13:26:40:97.5%:99:3.8137E-22:38:1:0:1:40 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:53:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:53:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:39:22:17:40:97.5%:99:3.8137E-22:37:1:1:0:40 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:41:10:31:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:53:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:40:19:21:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:32:14:18:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:9:25:35:97.14%:99:3.2089E-19:39:1:0:1:35 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:49:16:33:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:59:22:37:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:44:18:26:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 1589383 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|ribC_Rv1412-Rv1413_Rv1413|gene1446-gene1447|intergenic_region|gene1446-gene1447|||n.1589383A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:25:15:10:26:96.15%:99:7.9107E-15:0:0:0:0:28 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:51:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:51:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:50:22:7:15:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:26:11:15:27:96.3%:99:2.0165E-15:0:0:0:0:29 1/1:46:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:30:15:15:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:45:22:23:46:97.83%:99:9.6314E-27:0:0:0:0:47 1/1:44:46:28:18:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:46:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:18:9:9:20:90%:92:5.6585E-10:33:1:1:0:20 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:34:19:15:35:97.14%:99:3.5146E-20:0:0:0:0:38 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:32:17:15:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:49:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:40:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:18:12:6:19:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:62:36:26:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 1595377 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|uvrC_Rv1420|gene1454|transcript|Transcript_gene1454|Coding|1/1|c.1336C>T|p.Arg446Cys|1336/1941|1336/1941|446/646||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.1595377C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1595377C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1595377C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:43:50:23:27:51 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:55:0%:99:1E0:42:55:22:33:55 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:9:24:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:32 0/0:0:0:0:0:36:0%:66:1E0:49:36:19:17:36 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:22 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:60:0%:99:1E0:43:60:24:36:60 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:49 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:38 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:38 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:24 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:38 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:9:20:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:28 0/0:60:1:0:1:35:2.86%:55:5E-1:43:34:14:20:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:0:0:0:0:44:0%:81:1E0:43:44:14:30:44 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:48:0%:89:1E0:40:48:21:27:48 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:14:0%:25:1E0:45:14:7:7:15 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:44 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:56 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:20 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:44 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:44:0%:81:1E0:43:44:11:33:44 0/0:0:0:0:0:47:0%:89:1E0:43:47:18:29:49 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:14:27:41 0/0:0:0:0:0:14:0%:25:1E0:42:14:4:10:14 0/0:0:0:0:0:12:0%:21:1E0:49:12:3:9:12 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:17:0%:33:1E0:51:17:7:10:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:34 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:49 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:44 0/0:0:0:0:0:32:0%:59:1E0:41:32:10:22:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:39:1:0:1:56:1.79%:91:5E-1:41:55:20:35:56 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:48 0/0:0:0:0:0:31:0%:59:1E0:48:31:10:21:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:22 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:44 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:47:0%:89:1E0:45:47:15:32:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:31 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:24 0/0:33:1:1:0:47:2.13%:77:5E-1:43:46:22:24:48 0/0:39:1:0:1:33:3.03%:52:5E-1:44:32:15:17:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:19 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:42:0%:77:1E0:42:42:11:31:42 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:20:6:29 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:40 0/0:0:0:0:0:51:0%:97:1E0:39:51:25:26:51 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 0/0:0:0:0:0:51:0%:97:1E0:45:51:22:29:51 0/0:0:0:0:0:23:0%:44:1E0:39:23:9:14:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:61:0%:99:1E0:40:61:34:27:63 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:42 0/0:0:0:0:0:48:0%:89:1E0:41:48:22:26:50 0/0:0:0:0:0:56:0%:99:1E0:38:56:23:33:59 0/0:0:0:0:0:55:0%:99:1E0:44:55:28:27:57 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:47 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:46 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:48 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:39:1:0:1:63:1.59%:99:5E-1:39:62:34:28:63 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:47 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:50 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:41:0%:78:1E0:41:41:14:27:41 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:45 0/0:0:0:0:0:51:0%:97:1E0:41:51:20:31:51 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:41 MTB_anc 1600685 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1425_Rv1425|gene1459|transcript|Transcript_gene1459|Coding|1/1|c.1028T>C|p.Leu343Pro|1028/1380|1028/1380|343/459||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1600685T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1600685T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:49:36:18:18:37:97.3%:99:2.1762E-20:30:1:1:0:37 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:46:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:29:15:14:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:13:12:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:51:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:12:17:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:30:15:15:31:96.77%:99:6.8754E-17:37:1:1:0:32 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:31:14:17:32:96.88%:99:1.8007E-17:36:1:0:1:32 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:58:28:30:60:96.67%:99:1.6283E-34:0:0:0:0:62 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:40:19:21:41:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 MTB_anc 1608276 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1431_Rv1431|gene1465|transcript|Transcript_gene1465|Coding|1/1|c.194C>A|p.Thr65Asn|194/1770|194/1770|65/589||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1608276C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1608276C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:15:7:8:16:93.75%:75:2.8282E-8:38:1:0:1:17 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:54:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:30:15:15:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:28:14:14:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:23:9:14:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:64:26:38:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:11:10:22:95.45%:99:1.0931E-11:60:1:1:0:23 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:53:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:40:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 MTB_anc 1611283 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|custom|MODIFIER|||CUSTOM&additionnal_annotations|beta-lactams|||n.1611283C>T||||||,T|intergenic_region|MODIFIER|Rv1432_Rv1432-Rv1433_Rv1433|gene1466-gene1467|intergenic_region|gene1466-gene1467|||n.1611283C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:34:17:17:35:97.14%:99:3.2089E-19:36:1:0:1:36 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:52:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:58 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:53:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:30:12:18:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:41:10:31:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:49:13:36:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:49:15:34:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:51 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:66 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 1612278 . G GCGTCGA . PASS AC=268;AF=0.893;AN=300;ANN=GCGTCGA|disruptive_inframe_insertion|MODERATE|Rv1434_Rv1434|gene1468|transcript|Transcript_gene1468|Coding|1/1|c.26_31dupTCGACG|p.Val9_Asp10dup|32/138|32/138|11/45||INFO_REALIGN_3_PRIME,GCGTCGA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.1612278_1612279insCGTCGA||||||,GCGTCGA|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1612278_1612279insCGTCGA||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:18:29:50:94%:99:2.3219E-25:51:3:1:2:51 1/1:48:22:13:9:24:91.67%:99:1.0078E-11:35:2:2:0:24 1/1:46:48:27:21:51:94.12%:99:1.3143E-26:47:2:0:2:51 1/1:46:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:24:16:8:25:96%:99:2.0568E-13:36:1:1:0:25 1/1:45:16:6:10:17:94.12%:81:7.7134E-9:60:1:0:1:17 0/1:53:28:10:18:31:87.5%:99:1.2857E-14:52:3:3:0:31 0/1:47:24:12:12:27:88.89%:99:7.6222E-13:38:2:1:1:27 0/1:49:22:12:10:25:88%:99:2.5916E-11:35:3:1:2:25 1/1:47:36:17:19:38:94.74%:99:2.1762E-20:60:1:1:0:38 1/1:43:25:15:10:26:92.59%:99:2.0853E-13:46:2:1:1:27 1/1:46:55:30:25:56:98.21%:99:1.4593E-31:34:1:1:0:56 0/1:50:8:5:3:8:88.89%:41:7.77E-5:0:0:0:0:9 1/1:45:49:22:27:51:94.23%:99:1.6572E-26:33:3:2:1:53 1/1:41:34:15:19:32:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:32:20:12:31:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:47:18:9:9:19:94.74%:92:5.6585E-10:32:1:1:0:19 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 0/1:46:20:9:11:24:83.33%:91:6.3493E-10:38:4:3:1:24 1/1:47:30:13:17:32:93.75%:99:8.4556E-18:0:0:0:0:32 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:45:23:22:44:97.83%:99:1.1441E-25:33:1:1:0:46 1/1:46:28:15:13:31:90.32%:99:1.2857E-14:32:3:2:1:31 1/1:45:45:20:25:48:93.75%:99:3.2362E-24:41:3:2:1:48 1/1:44:33:16:17:33:97.06%:99:1.2301E-18:32:1:0:1:34 1/1:51:22:11:11:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:46:32:17:15:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:45:17:14:3:18:94.44%:86:2.0936E-9:38:1:0:1:18 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:28:14:14:29:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:43:37:17:20:38:97.37%:99:5.6582E-21:35:1:1:0:38 0/1:46:28:12:16:32:87.5%:99:1.2857E-14:35:3:0:3:32 0/1:46:25:11:14:28:89.29%:99:5.8768E-13:36:3:1:2:28 1/1:45:33:19:14:36:91.67%:99:5.9366E-18:34:2:2:0:36 1/1:46:34:26:8:37:91.89%:99:5.6582E-18:60:3:1:2:37 0/1:46:36:17:19:41:87.8%:99:3.2269E-18:40:5:2:3:41 0/1:46:25:15:10:28:89.29%:99:5.8768E-13:43:3:2:1:28 0/1:48:51:26:25:60:85%:99:1.1336E-25:38:7:3:4:60 1/1:47:43:24:19:47:91.49%:99:1.5372E-22:37:4:2:2:47 1/1:42:31:18:13:32:96.88%:99:1.8007E-17:38:1:0:1:32 1/1:41:27:11:16:28:96.43%:99:3.7915E-15:38:1:0:1:28 0/1:48:35:17:18:41:85.37%:99:1.1364E-17:44:5:4:1:41 1/1:40:32:19:13:33:94.12%:99:2.2142E-17:38:2:0:2:34 1/1:42:28:14:14:28:93.33%:99:4.194E-15:33:2:1:1:30 1/1:44:36:17:19:36:97.3%:99:2.1762E-20:32:1:0:1:38 0/1:45:37:22:15:41:88.1%:99:9.1365E-19:39:5:2:3:42 1/1:43:25:11:14:25:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:40:45:25:20:48:91.84%:99:1.1493E-23:53:4:1:3:49 0/1:49:33:18:15:38:86.84%:99:1.3966E-16:40:5:3:2:38 1/1:47:46:21:25:47:95.83%:99:1.9036E-25:47:2:0:2:48 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:40:22:18:41:97.56%:99:9.8874E-23:32:1:1:0:41 0/1:52:21:13:8:25:84%:99:9.0704E-11:42:3:2:1:25 1/1:44:24:11:13:25:92.31%:99:7.6222E-13:38:2:2:0:26 1/1:40:30:12:18:29:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:46:45:24:21:47:93.75%:99:3.2362E-24:44:3:2:1:48 1/1:45:48:32:16:50:96%:99:1.3143E-26:33:2:0:2:50 1/1:41:26:12:14:26:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:45:48:27:21:51:94.12%:99:6.2071E-26:44:3:1:2:51 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:43:23:20:45:95.56%:99:1.0412E-23:35:2:2:0:45 1/1:42:34:20:14:36:91.89%:99:5.6582E-18:42:3:2:1:37 1/1:44:48:25:23:52:90.57%:99:7.3051E-25:34:5:3:2:53 1/1:47:31:12:19:32:93.94%:99:8.2416E-17:38:2:2:0:33 1/1:47:34:11:23:37:91.89%:99:5.6582E-18:38:3:2:1:37 1/1:47:58:31:27:61:95.08%:99:1.087E-31:35:3:3:0:61 1/1:45:27:15:12:30:90%:99:4.6134E-14:38:3:1:2:30 1/1:47:40:25:15:42:95.24%:99:5.6346E-22:60:2:1:1:42 1/1:46:18:10:8:20:90%:87:1.6758E-9:60:2:1:1:20 0/1:47:18:7:11:21:85.71%:87:1.6758E-9:37:2:2:0:21 1/1:42:35:15:20:35:94.59%:99:4.2437E-19:38:2:1:1:37 1/1:50:22:11:11:24:91.67%:99:2.9149E-12:60:1:0:1:24 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:33:18:15:35:94.29%:99:5.9366E-18:36:2:2:0:35 0/1:41:40:19:21:45:86.96%:99:2.0407E-20:41:5:3:2:46 0/1:46:31:12:19:35:88.57%:99:7.3316E-16:37:4:2:2:35 1/1:43:40:19:21:41:97.56%:99:9.8874E-23:33:1:1:0:41 0/1:47:23:13:10:27:85.19%:99:7.3681E-12:43:3:1:2:27 1/1:43:28:15:13:30:90.32%:99:1.2857E-14:35:3:1:2:31 1/1:45:31:15:16:33:93.94%:99:8.2416E-17:31:2:2:0:33 1/1:45:29:17:12:29:96.67%:99:2.6212E-16:34:1:0:1:30 0/1:44:41:20:21:48:85.42%:99:3.1535E-20:35:7:5:2:48 1/1:42:30:20:10:32:93.75%:99:3.0612E-16:46:2:1:1:32 0/1:47:23:14:9:27:85.19%:99:7.3681E-12:44:3:2:1:27 1/1:42:41:25:16:44:93.18%:99:6.1775E-22:43:3:3:0:44 1/1:43:41:24:17:44:93.18%:99:6.1775E-22:43:3:2:1:44 1/1:44:39:12:27:40:97.5%:99:3.8137E-22:38:1:0:1:40 1/1:52:25:11:14:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:46:35:22:13:36:97.22%:99:8.3613E-20:35:1:0:1:36 1/1:46:21:9:12:23:91.3%:99:3.6437E-11:34:2:1:1:23 1/1:50:32:14:18:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:50:24:11:13:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:38:49:24:25:50:94.23%:99:3.4484E-27:35:2:0:2:52 1/1:44:32:14:18:35:91.43%:99:7.5196E-17:34:3:2:1:35 1/1:44:40:22:18:40:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:14:17:32:93.94%:99:8.2416E-17:35:2:2:0:35 1/1:48:28:15:13:30:93.33%:99:4.194E-15:33:2:2:0:30 1/1:43:36:20:16:38:94.74%:99:1.1316E-19:34:2:1:1:38 0/1:43:35:20:15:40:85.37%:99:2.5278E-17:42:6:3:3:41 1/1:46:30:17:13:33:90.91%:99:3.0612E-16:49:2:0:2:33 0/1:43:30:17:13:34:88.24%:99:9.89E-16:43:3:1:2:34 1/1:44:39:21:18:43:90.7%:99:2.6872E-20:35:4:2:2:43 0/1:41:33:14:19:37:86.84%:99:5.7997E-17:37:4:4:0:38 1/1:42:23:15:8:23:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:42:29:17:12:29:96.67%:99:2.6212E-16:60:1:0:1:32 1/1:48:32:17:15:33:96.97%:99:4.7095E-18:34:1:0:1:33 0/1:46:25:11:14:29:86.21%:99:1.3609E-12:35:4:1:3:29 1/1:43:31:18:13:33:91.18%:99:2.7308E-16:44:3:1:2:34 1/1:45:22:14:8:23:91.67%:99:1.0078E-11:36:2:1:1:24 1/1:42:32:15:17:34:91.43%:99:2.2142E-17:37:2:1:1:35 1/1:43:28:16:12:30:90.32%:99:1.2857E-14:37:3:2:1:31 1/1:38:23:12:11:24:92%:99:2.7767E-12:36:2:2:0:25 1/1:44:37:19:18:39:94.87%:99:3.0128E-20:48:2:1:1:39 1/1:37:33:16:17:33:94.29%:99:5.9366E-18:36:2:1:1:36 1/1:41:40:21:19:42:93.02%:99:2.287E-21:35:3:2:1:43 1/1:38:33:22:11:35:91.67%:99:2.0653E-17:36:3:2:1:36 1/1:40:31:15:16:32:93.94%:99:8.2416E-17:37:2:1:1:33 1/1:40:19:9:10:19:95%:98:1.5234E-10:24:1:1:0:20 1/1:41:62:29:33:64:95.38%:99:5.2716E-34:40:3:0:3:65 1/1:44:49:26:23:52:94.23%:99:1.6572E-26:34:3:1:2:52 0/1:44:33:15:18:39:84.62%:99:2.9926E-16:34:6:4:2:39 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 0/1:42:47:26:21:59:78.33%:99:8.9293E-22:38:13:8:5:60 1/1:41:32:16:16:30:100%:99:5.4567E-19:0:0:0:0:32 0/1:40:44:18:26:50:88%:99:1.2413E-22:33:5:2:3:51 0/1:33:36:22:14:38:85.71%:99:7.3092E-18:31:6:4:2:43 1/1:41:35:22:13:37:92.11%:99:4.2437E-19:35:2:1:1:39 0/1:41:33:18:15:38:84.62%:99:2.9926E-16:38:6:3:3:39 1/1:41:44:24:20:46:91.67%:99:4.207E-23:35:4:2:2:48 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 0/1:41:43:25:18:47:89.58%:99:1.5372E-22:35:4:2:2:48 0/1:40:33:13:20:36:89.19%:99:5.7997E-17:34:4:1:3:37 0/1:42:35:12:23:39:89.74%:99:4.5343E-18:34:4:2:2:39 1/1:39:36:18:18:37:90%:99:1.2627E-18:32:4:3:1:40 1/1:43:51:22:29:53:94.44%:99:1.1771E-27:34:3:0:3:54 1/1:38:53:23:30:55:94.64%:99:1.6199E-29:33:2:1:1:56 1/1:44:42:25:17:44:93.33%:99:3.9431E-23:36:2:1:1:45 1/1:44:42:23:19:44:95.45%:99:3.9431E-23:33:2:1:1:44 1/1:43:49:24:25:50:98%:99:5.0549E-28:33:1:0:1:51 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:22:12:10:22:95.65%:99:2.9149E-12:32:1:0:1:23 1/1:46:20:9:11:21:95.24%:99:4.0873E-11:37:1:1:0:21 1/1:43:31:18:13:34:91.18%:99:2.7308E-16:34:3:1:2:34 1/1:43:36:14:22:36:97.3%:99:2.1762E-20:29:1:1:0:37 1/1:43:23:9:14:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:43:33:18:15:36:91.67%:99:2.0653E-17:34:3:0:3:36 1/1:43:32:18:14:33:96.97%:99:4.7095E-18:29:1:1:0:33 1/1:41:47:24:23:49:95.92%:99:5.0044E-26:35:2:1:1:49 1/1:41:40:26:14:42:90.91%:99:2.287E-21:38:3:3:0:43 MTB_anc 1612595 . C G . PASS AC=1;AF=3.356e-03;AN=298;ANN=G|missense_variant|MODERATE|Rv1435c_Rv1435c|gene1469|transcript|Transcript_gene1469|Coding|1/1|c.356G>C|p.Gly119Ala|356/609|356/609|119/202||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1612595C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1612595C>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:2:2:0:36:5.56%:47:2.4648E-1:36:34:17:17:36 0/0:60:1:1:0:17:5.88%:24:5E-1:36:16:8:8:17 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:35:30:16:14:32 0/0:38:1:1:0:18:5.56%:24:5E-1:35:17:4:13:18 0/0:34:4:4:0:31:12.9%:29:5.6405E-2:37:27:10:17:32 0/0:42:4:0:4:15:26.67%:8:4.9808E-2:35:11:3:8:15 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:18 0/0:60:2:1:1:19:10.53%:21:2.4324E-1:38:17:8:9:19 0/0:35:2:2:0:24:8.33%:27:2.4468E-1:37:22:11:11:24 0/0:60:1:0:1:19:5.26%:28:5E-1:38:18:9:9:19 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:19 0/0:0:0:0:0:34:0%:62:1E0:36:34:19:15:36 0/0:38:1:0:1:11:9.09%:14:5E-1:39:10:3:7:11 0/0:0:0:0:0:29:0%:55:1E0:36:29:13:16:30 0/0:38:1:1:0:22:4.55%:31:5E-1:35:21:10:11:22 0/0:35:2:0:2:31:6.45%:40:2.459E-1:36:29:16:13:34 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:20 0/0:35:3:2:1:12:25%:6:1.087E-1:36:9:1:8:13 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/0:34:5:3:2:23:21.74%:14:2.4548E-2:39:18:10:8:23 0/0:35:2:2:0:21:9.52%:25:2.439E-1:38:19:5:14:22 0/0:30:1:0:1:29:3.45%:45:5E-1:36:28:17:11:30 0/0:37:1:1:0:20:5%:27:5E-1:35:19:5:14:21 0/0:45:5:3:2:25:20%:17:2.5076E-2:37:20:7:13:27 0/0:36:2:2:0:28:7.14%:34:2.4545E-1:35:26:7:19:28 0/0:0:0:0:0:10:0%:17:1E0:43:10:4:6:10 0/0:37:1:1:0:17:5.88%:24:5E-1:38:16:5:11:17 0/0:37:1:0:1:13:7.69%:18:5E-1:38:12:6:6:13 0/0:0:0:0:0:10:0%:17:1E0:34:10:1:9:11 0/0:34:3:1:2:25:12%:25:1.1735E-1:38:22:10:12:25 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:24 0/0:36:3:1:2:23:13.04%:22:1.1667E-1:38:20:9:11:23 0/0:44:3:2:1:30:10%:31:1.1864E-1:36:27:10:17:30 0/0:35:2:2:0:13:15.38%:13:2.4E-1:35:11:3:8:13 0/0:0:0:0:0:24:0%:44:1E0:37:24:7:17:25 0/0:38:1:0:1:31:3.23%:48:5E-1:36:30:10:20:33 0/0:35:4:2:2:25:16%:21:5.4928E-2:37:21:7:14:26 0/0:42:3:0:3:40:7.5%:46:1.2025E-1:36:37:17:20:40 0/0:33:1:1:0:23:4.35%:34:5E-1:35:22:8:14:24 0/0:36:4:4:0:43:9.3%:47:5.8115E-2:37:39:9:30:43 0/0:46:2:1:1:22:9.09%:24:2.4419E-1:37:20:7:13:22 0/0:52:3:2:1:24:12.5%:22:1.1702E-1:37:21:6:15:24 0/0:37:1:0:1:23:4.35%:34:5E-1:37:22:7:15:24 0/0:43:3:1:2:19:15.79%:17:1.1486E-1:38:16:7:9:20 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:20 0/0:49:2:1:1:27:7.41%:30:2.451E-1:39:24:11:13:29 0/0:49:2:2:0:24:8.33%:27:2.4468E-1:37:22:8:14:25 0/0:0:0:0:0:40:0%:74:1E0:36:40:13:27:40 0/0:37:3:2:1:33:9.09%:37:1.1923E-1:37:30:13:17:35 0/0:0:0:0:0:27:0%:52:1E0:35:27:5:22:28 0/0:60:1:0:1:14:7.14%:17:5E-1:39:13:9:4:16 0/0:36:5:2:3:31:16.13%:24:2.6257E-2:35:26:10:16:33 0/0:0:0:0:0:15:0%:29:1E0:35:15:8:7:15 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:19 0/0:34:2:1:1:21:9.52%:25:2.439E-1:37:19:10:9:23 0/0:38:4:2:2:36:11.11%:34:5.7257E-2:36:32:11:21:40 0/0:39:4:3:1:25:16%:21:5.4928E-2:38:21:5:16:26 0/0:38:1:1:0:17:5.88%:24:5E-1:36:16:6:10:18 0/0:34:1:1:0:27:3.7%:41:5E-1:37:26:10:16:28 0/0:0:0:0:0:30:0%:55:1E0:36:30:9:21:31 0/0:36:3:2:1:22:13.64%:19:1.1628E-1:37:19:8:11:23 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:22 0/0:0:0:0:0:23:0%:44:1E0:36:23:7:16:24 0/0:0:0:0:0:19:0%:37:1E0:35:19:9:10:20 0/0:43:5:4:1:18:27.78%:8:2.2727E-2:37:13:5:8:19 0/0:34:1:1:0:45:2.22%:73:5E-1:35:44:21:23:47 0/0:0:0:0:0:22:0%:40:1E0:38:22:8:14:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:24 0/0:34:1:1:0:21:4.76%:31:5E-1:37:20:9:11:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:1:0:1:18:5.56%:24:5E-1:36:17:4:13:19 0/0:60:1:0:1:25:4%:38:5E-1:37:24:10:14:26 0/0:38:1:0:1:9:11.11%:11:5E-1:37:8:5:3:9 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:25 0/0:36:3:2:1:28:10.71%:28:1.1818E-1:36:25:11:14:32 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 0/0:0:0:0:0:24:0%:44:1E0:35:24:8:16:25 0/0:46:2:1:1:22:9.09%:24:2.4419E-1:37:20:8:12:22 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:25 0/0:35:2:2:0:12:16.67%:10:2.3913E-1:36:10:6:4:12 0/0:29:1:1:0:17:5.88%:24:5E-1:36:16:10:6:18 0/0:0:0:0:0:30:0%:55:1E0:36:30:12:18:31 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 0/0:35:2:1:1:17:11.76%:18:2.4242E-1:36:15:7:8:18 0/0:34:4:4:0:37:10.81%:38:5.7399E-2:37:33:12:21:38 0/0:36:3:1:2:34:8.82%:37:1.194E-1:35:31:14:17:36 0/0:33:4:3:1:27:14.81%:23:5.5494E-2:35:23:8:15:27 0/0:0:0:0:0:9:0%:18:1E0:35:9:3:6:9 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:38:2:2:0:19:10.53%:21:2.4324E-1:36:17:9:8:19 0/0:34:3:2:1:28:10.71%:28:1.1818E-1:35:25:14:11:29 0/0:49:2:0:2:18:11.11%:18:2.4286E-1:42:16:7:9:18 0/0:36:1:1:0:39:2.63%:58:5E-1:37:37:11:26:40 0/0:34:1:0:1:17:5.88%:24:5E-1:36:16:5:11:18 0/0:33:2:1:1:33:6.06%:44:2.4615E-1:36:31:15:16:33 0/0:34:2:2:0:17:11.76%:18:2.4242E-1:35:15:7:8:18 0/0:0:0:0:0:20:0%:36:1E0:35:20:8:12:23 0/0:34:4:3:1:22:18.18%:15:5.3885E-2:36:18:6:12:25 0/0:32:2:2:0:18:11.11%:18:2.4286E-1:36:16:6:10:18 0/0:43:3:2:1:22:13.64%:19:1.1585E-1:36:18:6:12:24 0/0:0:0:0:0:24:0%:44:1E0:35:24:8:16:28 0/0:34:1:1:0:26:3.85%:38:5E-1:37:25:8:17:26 0/0:38:2:1:1:24:8.33%:27:2.4468E-1:35:22:10:12:27 0/0:0:0:0:0:14:0%:25:1E0:35:14:9:5:16 0/0:0:0:0:0:10:0%:17:1E0:34:10:1:9:10 0/0:38:1:1:0:25:4%:38:5E-1:36:24:9:15:25 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:24 0/0:32:1:0:1:22:4.55%:31:5E-1:37:21:13:8:22 0/0:34:2:1:1:27:7.41%:34:2.4528E-1:36:25:15:10:29 0/0:37:2:1:1:18:11.11%:18:2.4286E-1:34:16:8:8:18 0/0:40:4:0:4:19:21.05%:13:5.251E-2:36:15:8:7:21 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:27 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:35:23:7:16:24 0/0:35:3:3:0:23:13.04%:22:1.1667E-1:35:20:5:15:25 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:19 0/0:0:0:0:0:27:0%:52:1E0:35:27:8:19:29 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:16 0/0:36:4:2:2:51:7.84%:59:5.8806E-2:37:47:18:29:54 0/0:38:3:2:1:45:6.67%:56:1.2079E-1:36:42:15:27:48 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:25 0/0:36:2:1:1:17:11.76%:18:2.4242E-1:35:15:5:10:18 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:34:30:9:21:34 0/0:34:2:1:1:26:7.69%:30:2.451E-1:35:24:6:18:26 0/0:35:4:3:1:40:10%:40:5.7784E-2:35:36:12:24:41 0/0:0:0:0:0:28:0%:51:1E0:35:28:6:22:29 0/0:0:0:0:0:25:0%:48:1E0:35:25:10:15:26 0/0:35:2:2:0:28:7.14%:34:2.4545E-1:36:26:9:17:29 0/0:0:0:0:0:25:0%:48:1E0:34:25:8:17:25 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:23 0/0:29:1:1:0:26:3.85%:38:5E-1:35:25:7:18:27 0/0:0:0:0:0:17:0%:33:1E0:35:17:6:11:17 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:20 0/0:38:1:1:0:19:5.26%:28:5E-1:35:18:9:9:20 0/0:0:0:0:0:31:0%:59:1E0:36:31:7:24:33 0/1:33:8:2:6:34:23.53%:26:2.4562E-3:35:26:5:21:35 0/0:60:2:1:1:29:6.9%:37:2.4561E-1:36:27:4:23:29 0/0:36:2:1:1:38:5.26%:50:2.4667E-1:37:36:12:24:40 0/0:36:2:1:1:26:7.69%:30:2.451E-1:35:24:4:20:26 0/0:0:0:0:0:13:0%:25:1E0:38:13:7:6:15 0/0:0:0:0:0:17:0%:33:1E0:36:17:8:9:17 0/0:0:0:0:0:21:0%:40:1E0:35:21:3:18:21 0/0:37:3:3:0:35:8.57%:40:1.1957E-1:36:32:11:21:36 0/0:0:0:0:0:17:0%:33:1E0:35:17:5:12:18 0/0:35:2:0:2:24:8.33%:27:2.4468E-1:37:22:7:15:24 0/0:0:0:0:0:29:0%:55:1E0:36:29:6:23:30 0/0:35:4:4:0:37:10.81%:38:5.7399E-2:37:33:11:22:38 0/0:44:4:2:2:56:7.14%:65:5.9137E-2:36:52:15:37:57 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:31 MTB_anc 1612600 . G C . PASS AC=1;AF=3.356e-03;AN=298;ANN=C|synonymous_variant|LOW|Rv1435c_Rv1435c|gene1469|transcript|Transcript_gene1469|Coding|1/1|c.351C>G|p.Pro117Pro|351/609|351/609|117/202||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1612600G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1612600G>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:2:2:0:36:5.56%:47:2.4648E-1:37:34:17:17:36 0/0:60:1:1:0:17:5.88%:24:5E-1:38:16:8:8:17 0/0:38:2:1:1:30:6.67%:37:2.4576E-1:37:28:16:12:30 0/0:38:1:1:0:18:5.56%:24:5E-1:36:17:4:13:18 0/0:34:4:4:0:30:13.33%:26:5.62E-2:36:26:9:17:31 0/0:41:4:0:4:14:28.57%:6:4.8889E-2:37:10:3:7:14 0/0:0:0:0:0:18:0%:32:1E0:38:18:4:14:18 0/0:60:2:1:1:18:11.11%:18:2.4286E-1:38:16:8:8:18 0/0:38:2:2:0:24:8.33%:27:2.4468E-1:38:22:11:11:24 0/0:60:1:0:1:19:5.26%:28:5E-1:38:18:9:9:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:0:0:0:0:36:0%:66:1E0:37:36:21:15:36 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:11 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:30 0/0:38:1:1:0:20:5%:27:5E-1:36:19:9:10:22 0/0:38:2:0:2:34:5.88%:43:2.4627E-1:36:32:16:16:34 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:20 0/0:38:4:3:1:13:30.77%:6:4.7826E-2:36:9:1:8:13 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/0:36:5:3:2:23:21.74%:14:2.4548E-2:39:18:10:8:23 0/0:38:2:2:0:21:9.52%:25:2.439E-1:38:19:5:14:22 0/0:30:1:0:1:29:3.45%:45:5E-1:37:28:16:12:30 0/0:38:1:1:0:21:4.76%:31:5E-1:38:20:6:14:21 0/0:46:5:3:2:26:19.23%:17:2.531E-2:37:21:7:14:26 0/0:38:2:2:0:28:7.14%:34:2.4545E-1:36:26:7:19:28 0/0:0:0:0:0:10:0%:17:1E0:44:10:4:6:10 0/0:38:1:1:0:17:5.88%:24:5E-1:38:16:5:11:17 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:13 0/0:0:0:0:0:11:0%:22:1E0:37:11:2:9:11 0/0:36:3:1:2:25:12%:25:1.1735E-1:38:22:10:12:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:7:16:24 0/0:37:3:1:2:23:13.04%:22:1.1667E-1:38:20:9:11:23 0/0:45:3:2:1:30:10%:31:1.1864E-1:38:27:10:17:30 0/0:36:2:2:0:13:15.38%:13:2.4E-1:36:11:3:8:13 0/0:0:0:0:0:25:0%:48:1E0:37:25:6:19:26 0/0:38:1:0:1:32:3.12%:48:5E-1:36:31:10:21:33 0/0:36:4:2:2:24:16.67%:18:5.461E-2:37:20:8:12:24 0/0:45:3:0:3:39:7.69%:47:1.2013E-1:37:36:16:20:39 0/0:38:1:1:0:24:4.17%:34:5E-1:36:23:8:15:24 0/0:38:4:4:0:41:9.76%:44:5.79E-2:38:37:8:29:42 0/0:47:2:1:1:22:9.09%:24:2.4419E-1:38:20:7:13:22 0/0:52:3:2:1:24:12.5%:22:1.1702E-1:38:21:6:15:24 0/0:30:1:0:1:22:4.55%:31:5E-1:38:21:6:15:24 0/0:44:3:1:2:20:15%:16:1.1538E-1:38:17:7:10:20 0/0:0:0:0:0:20:0%:36:1E0:36:20:7:13:20 0/0:49:2:1:1:28:7.14%:34:2.4545E-1:39:26:11:15:29 0/0:49:2:2:0:25:8%:31:2.449E-1:38:23:9:14:25 0/0:0:0:0:0:40:0%:74:1E0:37:40:13:27:40 0/0:38:3:2:1:35:8.57%:40:1.1957E-1:37:32:13:19:35 0/0:0:0:0:0:28:0%:51:1E0:37:28:5:23:28 0/0:60:1:0:1:15:6.67%:21:5E-1:39:14:9:5:16 0/0:36:6:2:4:33:18.18%:20:1.2087E-2:36:26:10:16:34 0/0:37:1:0:1:15:6.67%:21:5E-1:37:14:8:6:15 0/0:0:0:0:0:18:0%:32:1E0:37:18:4:14:19 0/0:36:2:1:1:20:10%:21:2.4359E-1:37:18:8:10:21 0/0:40:4:2:2:38:10.53%:37:5.7534E-2:37:34:10:24:40 0/0:40:4:3:1:27:14.81%:23:5.5494E-2:37:23:7:16:27 0/0:37:1:1:0:16:6.25%:21:5E-1:36:15:5:10:17 0/0:38:1:1:0:27:3.7%:41:5E-1:37:26:10:16:28 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:30 0/0:38:3:2:1:23:13.04%:22:1.1667E-1:38:20:8:12:23 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:37:23:8:15:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:20 0/0:46:5:4:1:19:26.32%:10:2.3166E-2:37:14:5:9:19 0/0:35:1:1:0:45:2.22%:73:5E-1:37:44:21:23:46 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:21 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:23 0/0:38:1:1:0:21:4.76%:31:5E-1:38:20:9:11:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:1:0:1:18:5.56%:24:5E-1:37:17:4:13:19 0/0:60:1:0:1:26:3.85%:38:5E-1:38:25:11:14:26 0/0:38:1:0:1:9:11.11%:11:5E-1:37:8:5:3:9 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/0:38:2:2:0:31:6.45%:40:2.459E-1:37:29:11:18:32 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:23 0/0:49:2:1:1:20:10%:21:2.4359E-1:38:18:7:11:21 0/0:37:1:0:1:23:4.35%:34:5E-1:38:22:12:10:25 0/0:37:2:2:0:12:16.67%:10:2.3913E-1:37:10:6:4:12 0/0:33:1:1:0:17:5.88%:24:5E-1:36:16:10:6:18 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:31 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:20 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:37:15:7:8:17 0/0:38:4:4:0:38:10.53%:37:5.7534E-2:37:34:13:21:38 0/0:38:2:1:1:31:6.45%:40:2.459E-1:36:29:13:16:35 0/0:37:3:3:0:26:11.54%:25:1.1765E-1:37:23:8:15:27 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:9 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:38:2:2:0:19:10.53%:21:2.4324E-1:37:17:9:8:19 0/0:38:3:2:1:28:10.71%:28:1.1818E-1:37:25:14:11:29 0/0:49:2:0:2:17:11.76%:18:2.4242E-1:43:15:6:9:18 0/0:38:1:1:0:39:2.56%:62:5E-1:37:38:11:27:39 0/0:34:1:0:1:18:5.56%:24:5E-1:36:17:5:12:18 0/0:37:2:1:1:33:6.06%:44:2.4615E-1:36:31:15:16:33 0/0:36:2:2:0:17:11.76%:18:2.4242E-1:37:15:7:8:17 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 0/0:36:4:3:1:23:17.39%:18:5.4264E-2:36:19:6:13:24 0/0:30:1:1:0:16:6.25%:21:5E-1:36:15:5:10:18 0/0:45:3:2:1:23:13.04%:22:1.1667E-1:37:20:7:13:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:7:15:26 0/0:38:1:1:0:26:3.85%:38:5E-1:37:25:8:17:26 0/0:38:2:1:1:26:7.69%:30:2.451E-1:36:24:9:15:26 0/0:0:0:0:0:13:0%:25:1E0:38:13:9:4:15 0/0:0:0:0:0:10:0%:17:1E0:35:10:1:9:10 0/0:36:1:1:0:25:4%:38:5E-1:37:24:9:15:25 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:24 0/0:35:1:0:1:21:4.76%:31:5E-1:37:20:12:8:21 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:37:27:17:10:29 0/0:36:3:1:2:18:16.67%:14:1.1429E-1:36:15:7:8:19 0/0:42:4:0:4:20:20%:13:5.3015E-2:37:16:9:7:21 0/0:0:0:0:0:25:0%:48:1E0:36:25:11:14:26 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:36:23:8:15:24 0/0:38:2:2:0:23:8.7%:28:2.4444E-1:36:21:5:16:24 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:18 0/0:0:0:0:0:24:0%:44:1E0:37:24:7:17:26 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:16 0/0:36:5:2:3:53:9.43%:56:2.8317E-2:37:48:17:31:55 0/0:38:3:2:1:48:6.25%:59:1.2105E-1:37:45:16:29:48 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:25 0/0:34:2:1:1:17:11.76%:18:2.4242E-1:37:15:6:9:18 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:36:30:9:21:32 0/0:38:2:1:1:25:8%:31:2.449E-1:36:23:6:17:25 0/0:35:6:3:3:41:14.63%:33:1.2841E-2:36:35:12:23:42 0/0:0:0:0:0:26:0%:47:1E0:36:26:6:20:27 0/0:0:0:0:0:26:0%:47:1E0:36:26:10:16:27 0/0:37:2:2:0:27:7.41%:34:2.4528E-1:36:25:8:17:28 0/0:0:0:0:0:24:0%:44:1E0:36:24:7:17:25 0/0:0:0:0:0:23:0%:44:1E0:36:23:10:13:24 0/0:36:1:1:0:26:3.85%:38:5E-1:37:25:7:18:27 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:17 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:20 0/0:38:1:1:0:18:5.56%:24:5E-1:36:17:10:7:19 0/0:37:1:0:1:33:3.03%:52:5E-1:37:32:7:25:33 0/1:36:8:2:6:32:25%:26:2.3764E-3:36:24:6:18:33 0/0:60:2:1:1:27:7.41%:34:2.4528E-1:36:25:4:21:28 0/0:38:2:1:1:39:5.13%:50:2.4667E-1:38:36:12:24:39 0/0:35:2:1:1:25:8%:31:2.449E-1:36:23:4:19:25 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:15 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:20:0%:36:1E0:37:20:3:17:20 0/0:38:3:3:0:33:9.09%:37:1.1923E-1:37:30:10:20:34 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:16 0/0:36:2:0:2:24:8.33%:27:2.4468E-1:37:22:7:15:24 0/0:0:0:0:0:29:0%:55:1E0:37:29:7:22:29 0/0:35:4:3:1:37:10.81%:38:5.7399E-2:37:33:11:22:39 0/0:49:4:2:2:54:7.41%:62:5.9012E-2:37:50:13:37:54 0/0:0:0:0:0:31:0%:59:1E0:37:31:8:23:31 MTB_anc 1612603 . G T . PASS AC=2;AF=6.757e-03;AN=296;ANN=T|synonymous_variant|LOW|Rv1435c_Rv1435c|gene1469|transcript|Transcript_gene1469|Coding|1/1|c.348C>A|p.Ile116Ile|348/609|348/609|116/202||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1612603G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1612603G>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:36:3:2:1:37:8.11%:43:1.1986E-1:38:34:17:17:37 0/0:60:1:1:0:17:5.88%:24:5E-1:39:16:8:8:17 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:37:26:15:11:28 0/0:34:2:2:0:18:11.11%:18:2.4286E-1:37:16:3:13:19 0/0:34:5:5:0:31:16.13%:24:2.6257E-2:38:26:9:17:32 0/0:42:4:0:4:14:28.57%:6:4.8889E-2:37:10:3:7:14 0/0:0:0:0:0:18:0%:32:1E0:38:18:4:14:18 0/0:51:3:2:1:19:15.79%:17:1.1486E-1:39:16:8:8:19 0/0:38:2:2:0:24:8.33%:27:2.4468E-1:38:22:11:11:24 0/0:60:1:0:1:18:5.56%:24:5E-1:39:17:9:8:19 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:18 0/0:0:0:0:0:36:0%:66:1E0:38:36:21:15:36 0/0:0:0:0:0:11:0%:22:1E0:40:11:3:8:11 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:29 0/0:38:1:1:0:22:4.55%:31:5E-1:37:21:10:11:22 0/0:38:2:0:2:34:5.88%:43:2.4627E-1:37:32:16:16:34 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:37:4:3:1:13:30.77%:6:4.7826E-2:37:9:1:8:13 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:22 0/0:37:5:3:2:22:22.73%:12:2.4248E-2:40:17:9:8:22 0/0:38:2:2:0:22:9.09%:24:2.4419E-1:38:20:6:14:22 0/0:32:2:1:1:29:6.9%:37:2.4561E-1:37:27:16:11:31 0/0:38:1:1:0:21:4.76%:31:5E-1:38:20:6:14:21 0/0:46:5:3:2:26:19.23%:17:2.531E-2:37:21:7:14:26 0/0:38:2:2:0:27:7.41%:34:2.4528E-1:36:25:7:18:27 0/0:0:0:0:0:9:0%:18:1E0:45:9:3:6:10 0/0:37:1:1:0:17:5.88%:24:5E-1:39:16:5:11:17 0/0:0:0:0:0:12:0%:21:1E0:39:12:5:7:12 0/0:0:0:0:0:11:0%:22:1E0:37:11:2:9:11 0/0:34:3:1:2:26:11.54%:25:1.1765E-1:38:23:11:12:27 0/0:0:0:0:0:23:0%:44:1E0:39:23:7:16:24 0/0:34:3:1:2:22:13.64%:19:1.1628E-1:38:19:9:10:22 0/0:43:3:2:1:29:10.34%:31:1.1842E-1:38:26:10:16:30 0/0:38:2:2:0:12:16.67%:10:2.3913E-1:38:10:2:8:12 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:25 0/0:38:1:0:1:32:3.12%:48:5E-1:37:31:10:21:32 0/0:34:5:3:2:24:20.83%:14:2.4823E-2:39:19:8:11:24 0/0:45:3:0:3:39:7.69%:47:1.2013E-1:37:36:16:20:39 0/0:38:1:1:0:23:4.35%:34:5E-1:36:22:7:15:23 0/0:36:4:4:0:40:10%:40:5.7784E-2:39:36:8:28:41 0/0:49:2:1:1:21:9.52%:25:2.439E-1:39:19:6:13:21 0/0:49:3:2:1:23:13.04%:22:1.1667E-1:38:20:6:14:25 0/0:37:1:0:1:24:4.17%:34:5E-1:38:23:7:16:24 0/0:49:2:1:1:18:11.11%:18:2.4286E-1:38:16:6:10:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:20 0/0:60:1:1:0:28:3.57%:41:5E-1:40:26:12:14:28 0/0:49:2:2:0:25:8%:31:2.449E-1:38:23:9:14:25 0/0:0:0:0:0:40:0%:74:1E0:38:40:13:27:40 0/0:37:3:2:1:34:8.82%:37:1.194E-1:38:31:13:18:35 0/0:0:0:0:0:27:0%:52:1E0:38:27:5:22:27 0/0:60:1:0:1:15:6.67%:21:5E-1:39:14:9:5:16 0/0:33:6:2:4:34:17.65%:23:1.2287E-2:37:28:10:18:34 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:5:14:19 0/0:35:3:2:1:22:13.64%:19:1.1628E-1:38:19:9:10:22 0/0:40:4:2:2:39:10.26%:41:5.7662E-2:38:35:12:23:40 0/0:39:4:3:1:26:15.38%:20:5.5222E-2:39:22:7:15:26 0/0:38:1:1:0:17:5.88%:24:5E-1:37:16:6:10:17 0/0:38:1:1:0:28:3.57%:41:5E-1:37:27:10:17:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:30 0/0:38:3:2:1:23:13.04%:22:1.1667E-1:39:20:8:12:23 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:20 0/0:39:1:0:1:23:4.35%:34:5E-1:38:22:8:14:23 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 0/0:46:5:4:1:19:26.32%:10:2.3166E-2:37:14:5:9:19 0/0:38:1:1:0:46:2.17%:73:5E-1:37:45:22:23:46 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:21 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:23 0/0:38:1:1:0:21:4.76%:31:5E-1:38:20:9:11:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:1:0:1:19:5.26%:28:5E-1:37:18:5:13:19 0/0:60:1:0:1:26:3.85%:38:5E-1:38:25:11:14:26 0/0:38:1:0:1:9:11.11%:11:5E-1:38:8:5:3:9 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:21 0/0:36:4:3:1:33:12.12%:32:5.6777E-2:36:29:11:18:33 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:13 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:49:2:1:1:21:9.52%:25:2.439E-1:38:19:8:11:21 0/0:34:1:0:1:25:4%:38:5E-1:38:24:12:12:25 0/0:36:3:2:1:13:23.08%:9:1.1E-1:38:10:6:4:13 0/0:36:1:1:0:18:5.56%:24:5E-1:35:17:11:6:18 0/0:0:0:0:0:30:0%:55:1E0:37:30:12:18:30 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:21 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:37:15:7:8:17 0/0:37:5:5:0:38:13.16%:32:2.7169E-2:38:33:13:20:39 0/0:34:4:1:3:35:11.43%:35:5.7106E-2:37:31:14:17:35 0/0:34:4:3:1:27:14.81%:23:5.5494E-2:37:23:8:15:27 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:9 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:37:15:8:7:18 0/0:38:3:2:1:28:10.71%:28:1.1818E-1:37:25:13:12:29 0/0:49:2:0:2:18:11.11%:18:2.4286E-1:42:16:7:9:18 0/0:35:2:2:0:39:5.13%:54:2.4675E-1:38:37:11:26:39 0/0:35:2:0:2:19:10.53%:21:2.4324E-1:37:17:5:12:19 0/0:36:3:1:2:33:9.09%:37:1.1923E-1:37:30:15:15:34 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:36:15:7:8:17 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:20 0/0:36:4:3:1:23:17.39%:18:5.4264E-2:37:19:7:12:24 0/0:36:1:1:0:17:5.88%:24:5E-1:37:16:6:10:18 0/0:45:3:2:1:23:13.04%:22:1.1667E-1:37:20:7:13:24 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:26 0/0:38:1:1:0:25:4%:38:5E-1:38:24:8:16:26 0/0:38:2:1:1:25:8%:31:2.449E-1:37:23:8:15:25 0/0:0:0:0:0:14:0%:25:1E0:38:14:10:4:15 0/0:0:0:0:0:10:0%:17:1E0:35:10:1:9:10 0/0:36:1:1:0:25:4%:38:5E-1:38:24:9:15:25 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:24 0/0:36:2:1:1:22:9.09%:24:2.4419E-1:37:20:12:8:22 0/0:37:2:1:1:29:6.9%:37:2.4561E-1:37:27:17:10:29 0/0:36:3:1:2:19:15.79%:17:1.1486E-1:37:16:8:8:19 0/0:43:4:0:4:20:20%:13:5.3015E-2:37:16:9:7:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:27 0/0:0:0:0:0:24:0%:44:1E0:36:24:8:16:24 0/0:36:3:3:0:22:13.64%:19:1.1628E-1:37:19:5:14:22 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:19 0/0:0:0:0:0:26:0%:47:1E0:37:26:8:18:26 0/0:0:0:0:0:16:0%:29:1E0:36:16:3:13:17 0/0:37:4:2:2:53:7.55%:62:5.8946E-2:38:49:18:31:54 0/0:37:3:2:1:47:6.38%:59:1.2097E-1:37:44:16:28:49 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:35:2:1:1:18:11.11%:18:2.4286E-1:37:16:6:10:18 0/0:35:3:2:1:30:10%:31:1.1864E-1:36:27:7:20:32 0/0:34:3:1:2:27:11.11%:28:1.1792E-1:36:24:7:17:27 0/1:33:7:4:3:43:16.28%:22:5.9972E-3:37:36:12:24:43 0/0:32:1:1:0:27:3.7%:41:5E-1:36:26:7:19:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:28 0/0:37:2:2:0:28:7.14%:34:2.4545E-1:37:26:8:18:28 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:24 0/0:38:1:1:0:27:3.7%:41:5E-1:36:26:7:19:28 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:20 0/0:34:2:2:0:17:11.76%:18:2.4242E-1:36:15:7:8:19 0/0:36:2:2:0:34:5.88%:43:2.4627E-1:38:32:6:26:34 0/1:36:8:2:6:33:24.24%:26:2.4173E-3:37:25:6:19:33 0/0:60:2:1:1:27:7.41%:34:2.4528E-1:37:25:4:21:27 0/0:36:3:2:1:38:7.89%:43:1.2E-1:38:35:11:24:39 0/0:38:2:1:1:24:8.33%:27:2.4468E-1:37:22:4:18:24 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:15 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:20:0%:36:1E0:38:20:3:17:20 0/0:38:3:3:0:34:8.82%:37:1.194E-1:37:31:10:21:34 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:16 0/0:38:2:0:2:23:8.7%:28:2.4444E-1:37:21:7:14:24 0/0:0:0:0:0:29:0%:55:1E0:37:29:7:22:29 0/0:35:5:4:1:39:12.82%:35:2.7273E-2:38:34:12:22:39 0/0:45:5:3:2:52:9.62%:52:2.8261E-2:38:47:13:34:55 0/0:0:0:0:0:29:0%:55:1E0:38:29:8:21:30 MTB_anc 1612606 . T C . PASS AC=2;AF=6.711e-03;AN=298;ANN=C|synonymous_variant|LOW|Rv1435c_Rv1435c|gene1469|transcript|Transcript_gene1469|Coding|1/1|c.345A>G|p.Pro115Pro|345/609|345/609|115/202||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1612606T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1612606T>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:36:4:3:1:38:10.53%:37:5.7534E-2:38:34:17:17:38 0/0:60:1:1:0:16:6.25%:21:5E-1:39:15:8:7:16 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:38:26:15:11:28 0/0:38:2:2:0:19:10.53%:21:2.4324E-1:36:17:4:13:19 0/0:38:5:5:0:32:15.62%:24:2.6412E-2:38:27:10:17:32 0/0:42:4:0:4:14:28.57%:6:4.8889E-2:37:10:3:7:14 0/0:0:0:0:0:18:0%:32:1E0:38:18:4:14:18 0/0:52:3:2:1:19:15.79%:17:1.1486E-1:39:16:8:8:19 0/0:36:4:4:0:26:15.38%:20:5.5222E-2:38:22:11:11:26 0/0:60:2:0:2:19:10.53%:21:2.4324E-1:39:17:9:8:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:32:1:1:0:36:2.78%:55:5E-1:38:35:20:15:36 0/0:0:0:0:0:11:0%:22:1E0:40:11:3:8:11 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:39:1:1:0:22:4.55%:31:5E-1:37:21:10:11:22 0/0:49:2:0:2:34:5.88%:43:2.4627E-1:37:32:16:16:34 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:20 0/0:38:4:3:1:13:30.77%:6:4.7826E-2:37:9:1:8:13 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:38:5:3:2:22:22.73%:12:2.4248E-2:40:17:9:8:22 0/0:36:2:2:0:22:9.09%:24:2.4419E-1:39:20:6:14:22 0/0:34:2:2:0:30:6.67%:37:2.4576E-1:38:28:17:11:33 0/0:36:3:2:1:23:13.04%:22:1.1667E-1:39:20:6:14:23 0/0:45:6:3:3:27:22.22%:16:1.1461E-2:38:21:7:14:27 0/0:38:2:2:0:26:7.69%:31:2.449E-1:37:23:6:17:27 0/0:0:0:0:0:9:0%:18:1E0:45:9:3:6:9 0/0:35:2:1:1:18:11.11%:18:2.4286E-1:38:16:5:11:18 0/0:0:0:0:0:12:0%:21:1E0:39:12:5:7:12 0/0:0:0:0:0:12:0%:21:1E0:37:12:3:9:12 0/0:36:4:1:3:26:15.38%:20:5.5222E-2:39:22:11:11:27 0/0:35:1:0:1:25:4%:38:5E-1:39:24:8:16:25 0/0:36:3:1:2:22:13.64%:19:1.1628E-1:39:19:9:10:22 0/0:45:3:2:1:29:10.34%:31:1.1842E-1:38:26:9:17:29 0/0:38:2:2:0:12:16.67%:10:2.3913E-1:37:10:2:8:12 0/0:0:0:0:0:24:0%:44:1E0:39:24:7:17:25 0/0:39:1:0:1:31:3.23%:48:5E-1:37:30:10:20:31 0/0:35:5:3:2:23:21.74%:14:2.4548E-2:38:18:8:10:24 0/0:40:5:1:4:41:12.2%:38:2.7465E-2:37:36:16:20:41 0/0:38:1:1:0:23:4.35%:34:5E-1:36:22:7:15:23 0/0:38:4:4:0:40:10%:40:5.7784E-2:39:36:7:29:40 0/0:49:2:1:1:21:9.52%:25:2.439E-1:38:19:6:13:21 0/0:52:3:2:1:24:12.5%:22:1.1702E-1:37:21:7:14:25 0/0:35:1:0:1:24:4.17%:34:5E-1:38:23:7:16:24 0/0:45:3:1:2:20:15%:16:1.1538E-1:39:17:7:10:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:20 0/0:44:3:1:2:29:10.34%:31:1.1842E-1:39:26:12:14:29 0/0:49:2:2:0:25:8%:31:2.449E-1:38:23:9:14:25 0/0:0:0:0:0:39:0%:74:1E0:38:39:13:26:39 0/0:37:5:3:2:36:13.89%:29:2.6944E-2:37:31:12:19:37 0/0:0:0:0:0:29:0%:55:1E0:38:29:6:23:29 0/0:60:1:0:1:15:6.67%:21:5E-1:39:14:9:5:16 0/0:37:6:2:4:34:17.65%:23:1.2287E-2:37:28:10:18:35 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:5:14:19 0/0:36:4:3:1:23:17.39%:18:5.4264E-2:37:19:9:10:23 0/0:41:5:3:2:40:12.5%:35:2.7371E-2:38:35:12:23:41 0/0:39:6:4:2:28:21.43%:16:1.1603E-2:39:22:7:15:28 0/0:39:1:1:0:16:6.25%:21:5E-1:37:15:5:10:16 0/0:38:1:1:0:26:3.85%:38:5E-1:38:25:9:16:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:30 0/0:38:3:2:1:23:13.04%:22:1.1667E-1:39:20:8:12:23 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:30:1:0:1:23:4.35%:34:5E-1:38:22:8:14:23 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 0/0:45:5:4:1:19:26.32%:10:2.3166E-2:38:14:5:9:19 0/0:35:3:2:1:47:6.38%:59:1.2097E-1:37:44:22:22:47 0/0:0:0:0:0:22:0%:40:1E0:40:22:7:15:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:23 0/0:36:2:2:0:21:9.52%:25:2.439E-1:39:19:9:10:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:1:0:1:19:5.26%:28:5E-1:37:18:5:13:19 0/0:60:1:0:1:25:4%:38:5E-1:38:24:11:13:25 0/0:49:2:1:1:10:20%:7:2.3684E-1:38:8:5:3:10 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:36:4:3:1:32:12.5%:29:5.6596E-2:37:28:10:18:32 0/0:0:0:0:0:13:0%:25:1E0:40:13:5:8:13 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:49:2:1:1:21:9.52%:25:2.439E-1:38:19:8:11:21 0/0:35:1:0:1:25:4%:38:5E-1:38:24:12:12:25 0/0:35:3:2:1:13:23.08%:9:1.1E-1:37:10:6:4:13 0/0:38:1:1:0:18:5.56%:24:5E-1:36:17:11:6:18 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:21 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:37:15:7:8:17 0/0:37:5:5:0:38:13.16%:32:2.7169E-2:38:33:13:20:39 0/0:37:4:1:3:34:11.76%:31:5.6946E-2:37:30:14:16:34 0/0:38:3:3:0:25:12%:25:1.1735E-1:37:22:7:15:27 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:9 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:39:2:2:0:18:11.11%:18:2.4286E-1:38:16:9:7:18 0/0:38:3:2:1:29:10.34%:31:1.1842E-1:37:26:14:12:29 0/0:49:2:0:2:18:11.11%:18:2.4286E-1:43:16:7:9:18 0/0:38:2:2:0:38:5.26%:50:2.4667E-1:39:36:11:25:38 0/0:37:2:0:2:19:10.53%:21:2.4324E-1:38:17:5:12:19 0/0:36:4:1:3:35:11.43%:35:5.7106E-2:37:31:15:16:35 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:38:15:7:8:17 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:36:4:3:1:24:16.67%:18:5.461E-2:36:20:7:13:24 0/0:39:2:2:0:18:11.11%:18:2.4286E-1:37:16:6:10:18 0/0:45:3:2:1:24:12.5%:22:1.1702E-1:37:21:7:14:24 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:26 0/0:38:1:1:0:24:4.17%:34:5E-1:38:23:8:15:25 0/0:39:2:1:1:25:8%:31:2.449E-1:37:23:8:15:25 0/0:0:0:0:0:16:0%:29:1E0:37:16:11:5:16 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:10 0/0:38:1:1:0:25:4%:38:5E-1:38:24:9:15:25 0/0:33:1:1:0:24:4.17%:34:5E-1:37:23:9:14:24 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:37:20:12:8:22 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:38:27:17:10:29 0/0:38:3:1:2:19:15.79%:17:1.1486E-1:37:16:8:8:19 0/0:43:4:0:4:19:21.05%:13:5.251E-2:37:15:9:6:20 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:25 0/0:32:1:1:0:7:14.29%:8:5E-1:36:6:2:4:7 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:28 0/0:0:0:0:0:22:0%:40:1E0:37:22:7:15:23 0/0:37:4:3:1:23:17.39%:18:5.4264E-2:37:19:5:14:24 0/0:32:1:0:1:19:5.26%:28:5E-1:38:18:10:8:19 0/0:0:0:0:0:24:0%:44:1E0:38:24:8:16:25 0/0:0:0:0:0:16:0%:29:1E0:37:16:3:13:17 0/0:38:5:2:3:53:9.43%:56:2.8317E-2:37:48:17:31:54 0/0:37:4:2:2:49:8.16%:56:5.8654E-2:37:45:16:29:49 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:35:3:1:2:19:15.79%:17:1.1486E-1:37:16:6:10:19 0/0:38:3:2:1:31:9.68%:34:1.1885E-1:37:28:8:20:32 0/0:36:4:2:2:27:14.81%:23:5.5494E-2:37:23:6:17:29 0/1:36:7:4:3:43:16.28%:22:5.9972E-3:37:36:12:24:43 0/0:33:2:2:0:28:7.14%:34:2.4545E-1:37:26:7:19:29 0/0:0:0:0:0:27:0%:52:1E0:37:27:10:17:29 0/0:37:3:2:1:29:10.34%:31:1.1842E-1:37:26:8:18:29 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:25 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:25 0/0:38:1:1:0:28:3.57%:41:5E-1:36:27:8:19:28 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:17 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:20 0/0:36:3:3:0:20:15%:16:1.1538E-1:38:17:9:8:20 0/0:35:2:2:0:35:5.71%:47:2.4638E-1:38:33:7:26:35 0/1:38:8:2:6:32:25%:26:2.3764E-3:37:24:6:18:32 0/0:60:2:1:1:27:7.41%:34:2.4528E-1:37:25:4:21:27 0/0:38:3:2:1:39:7.69%:47:1.2013E-1:38:36:11:25:39 0/0:38:2:1:1:22:9.09%:24:2.4419E-1:37:20:4:16:22 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:15 0/0:32:1:0:1:18:5.56%:24:5E-1:38:17:8:9:18 0/0:0:0:0:0:20:0%:36:1E0:39:20:3:17:20 0/0:38:3:3:0:33:9.09%:37:1.1923E-1:37:30:10:20:34 0/0:0:0:0:0:16:0%:29:1E0:39:16:6:10:16 0/0:38:2:0:2:24:8.33%:27:2.4468E-1:37:22:7:15:24 0/0:33:2:2:0:30:6.67%:37:2.4576E-1:38:28:7:21:31 0/0:36:6:5:1:40:15%:30:1.2773E-2:38:34:12:22:40 0/0:46:5:3:2:55:9.09%:59:2.8423E-2:38:50:13:37:55 0/0:0:0:0:0:30:0%:55:1E0:38:30:8:22:30 MTB_anc 1612621 . C A . PASS AC=37;AF=0.125;AN=296;ANN=A|synonymous_variant|LOW|Rv1435c_Rv1435c|gene1469|transcript|Transcript_gene1469|Coding|1/1|c.330G>T|p.Pro110Pro|330/609|330/609|110/202||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1612621C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1612621C>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:5:3:2:37:13.51%:32:2.706E-2:38:32:15:17:37 0/0:51:3:3:0:18:16.67%:14:1.1429E-1:39:15:8:7:18 0/0:36:4:2:2:27:14.81%:23:5.5494E-2:36:23:14:9:28 0/0:42:4:3:1:16:25%:8:5.0612E-2:36:12:4:8:18 0/1:36:12:9:3:33:36.36%:41:7.2075E-5:36:21:7:14:34 0/0:46:5:1:4:14:35.71%:4:2.037E-2:36:9:3:6:14 0/0:0:0:0:0:19:0%:37:1E0:38:19:5:14:19 0/1:43:7:6:1:23:30.43%:23:4.5803E-3:38:16:8:8:23 0/0:37:5:4:1:24:20.83%:14:2.4823E-2:38:19:10:9:24 0/0:49:4:2:2:21:19.05%:15:5.3471E-2:38:17:9:8:21 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:17 0/0:34:4:4:0:37:10.81%:38:5.7399E-2:37:33:19:14:37 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:11 0/0:37:2:1:1:31:6.45%:40:2.459E-1:38:29:13:16:31 0/0:42:4:2:2:22:18.18%:15:5.3885E-2:36:18:10:8:24 0/0:43:4:2:2:33:12.12%:32:5.6777E-2:36:29:14:15:33 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:19 0/1:40:7:4:3:14:50%:25:2.8986E-3:36:7:0:7:14 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/1:36:8:5:3:23:34.78%:27:1.8791E-3:39:15:9:6:23 0/0:37:6:4:2:25:24%:14:1.1145E-2:38:19:6:13:25 0/1:37:14:6:8:42:33.33%:47:1.6656E-5:36:28:16:12:43 0/0:42:5:3:2:24:20.83%:14:2.4823E-2:39:19:5:14:24 0/1:40:9:4:5:29:31.03%:30:9.4048E-4:37:20:6:14:29 0/1:35:10:7:3:31:32.26%:33:4.1251E-4:37:21:6:15:32 0/0:0:0:0:0:12:0%:21:1E0:42:12:5:7:12 0/0:36:3:2:1:19:15.79%:17:1.1486E-1:38:16:5:11:20 0/0:0:0:0:0:12:0%:21:1E0:39:12:5:7:12 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:11 0/0:41:5:2:3:26:19.23%:17:2.531E-2:38:21:11:10:27 0/0:35:5:1:4:29:17.24%:22:2.5917E-2:38:24:8:16:29 0/1:36:8:3:5:26:30.77%:26:2.076E-3:37:18:9:9:26 0/0:46:5:2:3:29:17.24%:19:2.5729E-2:38:23:9:14:29 0/1:37:6:3:3:15:40%:20:8.4291E-3:36:9:2:7:15 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:25 0/1:41:7:4:3:32:21.88%:22:5.4182E-3:36:25:9:16:33 0/1:36:7:5:2:22:31.82%:23:4.4505E-3:38:15:5:10:22 0/1:40:7:3:4:43:16.28%:22:5.9563E-3:36:35:16:19:43 0/0:38:2:2:0:20:10%:21:2.4359E-1:37:18:6:12:22 0/1:40:8:6:2:41:19.51%:25:2.6808E-3:38:33:6:27:41 0/0:41:5:3:2:22:22.73%:12:2.4248E-2:38:17:6:11:22 0/0:51:6:4:2:27:22.22%:16:1.1461E-2:37:21:6:15:28 0/0:36:5:3:2:25:20%:17:2.5076E-2:38:20:6:14:25 0/0:42:5:1:4:18:27.78%:8:2.2727E-2:37:13:6:7:18 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:24 0/0:41:6:3:3:28:21.43%:16:1.1603E-2:40:22:9:13:29 0/0:48:4:3:1:23:17.39%:18:5.4264E-2:37:19:8:11:25 0/0:0:0:0:0:39:0%:74:1E0:37:39:14:25:39 0/1:36:8:4:4:41:19.51%:25:2.6808E-3:36:33:14:19:41 0/0:0:0:0:0:27:0%:52:1E0:38:27:7:20:28 0/0:52:3:1:2:16:18.75%:11:1.129E-1:39:13:8:5:16 0/1:36:10:5:5:35:28.57%:33:4.6276E-4:36:25:9:16:36 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:16 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:19 0/1:38:12:7:5:25:48%:43:4.2836E-5:38:13:6:7:25 0/1:39:9:5:4:38:23.68%:29:1.1442E-3:37:29:9:20:39 0/1:38:11:6:5:32:34.38%:37:1.7351E-4:38:21:7:14:33 0/0:36:3:2:1:17:17.65%:14:1.1364E-1:37:14:5:9:17 0/0:38:1:1:0:27:3.7%:41:5E-1:36:26:10:16:28 0/0:0:0:0:0:32:0%:59:1E0:38:32:11:21:32 0/0:41:6:3:3:23:26.09%:11:1.0777E-2:38:17:7:10:23 0/0:39:1:0:1:20:5%:27:5E-1:38:19:12:7:20 0/0:36:6:2:4:26:23.08%:13:1.1309E-2:37:20:7:13:27 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:17 0/1:42:8:4:4:22:36.36%:27:1.8042E-3:36:14:5:9:22 0/0:37:6:3:3:46:13.04%:39:1.3136E-2:36:40:20:20:48 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:26 0/0:37:1:0:1:24:4.17%:34:5E-1:38:23:10:13:24 0/0:43:4:4:0:22:18.18%:15:5.3885E-2:37:18:9:9:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:38:15:4:11:17 0/0:44:3:1:2:25:12%:25:1.1735E-1:39:22:9:13:25 0/0:60:2:1:1:10:20%:7:2.3684E-1:38:8:5:3:10 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/1:40:8:7:1:34:23.53%:26:2.4562E-3:36:26:9:17:35 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:46:5:3:2:21:23.81%:12:2.3921E-2:37:16:8:8:22 0/0:40:5:2:3:26:19.23%:17:2.531E-2:38:21:11:10:28 0/0:37:5:2:3:13:38.46%:4:1.9565E-2:36:8:4:4:13 0/0:35:2:2:0:17:11.76%:18:2.4242E-1:36:15:10:5:17 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:30 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 0/0:38:3:2:1:17:17.65%:11:1.129E-1:36:13:6:7:17 0/0:37:6:6:0:36:16.67%:25:1.2467E-2:37:30:10:20:38 0/1:39:10:3:7:40:25%:32:5.1483E-4:37:30:14:16:40 0/1:39:9:6:3:29:31.03%:30:9.1169E-4:36:19:6:13:30 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:11 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:36:3:3:0:18:16.67%:14:1.1429E-1:36:15:9:6:18 0/0:38:4:3:1:26:15.38%:20:5.5222E-2:38:22:11:11:27 0/0:48:4:1:3:17:23.53%:11:5.132E-2:42:13:6:7:17 0/0:38:2:2:0:35:5.71%:47:2.4638E-1:37:33:10:23:36 0/0:38:3:1:2:20:15%:16:1.1538E-1:37:17:5:12:20 0/1:38:9:4:5:34:26.47%:29:1.0644E-3:36:25:14:11:36 0/1:37:6:4:2:20:30%:20:9.828E-3:37:13:6:7:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:22 0/0:36:6:4:2:23:26.09%:11:1.0777E-2:36:17:5:12:23 0/0:35:5:3:2:18:27.78%:8:2.2727E-2:36:13:5:8:19 0/0:42:4:3:1:23:17.39%:18:5.4264E-2:36:19:6:13:23 0/0:0:0:0:0:22:0%:40:1E0:38:22:6:16:23 0/0:42:4:3:1:25:16%:21:5.4928E-2:38:21:6:15:25 0/1:34:8:5:3:26:30.77%:26:2.076E-3:36:18:5:13:28 0/0:0:0:0:0:14:0%:25:1E0:37:14:11:3:14 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:9 0/0:35:4:4:0:26:15.38%:21:5.4928E-2:37:21:8:13:27 0/0:36:3:2:1:25:12%:25:1.1735E-1:36:22:8:14:25 0/0:37:6:4:2:24:25%:11:1.0968E-2:37:18:11:7:24 0/0:37:6:3:3:32:18.75%:20:1.2087E-2:36:26:17:9:33 0/1:38:8:2:6:24:33.33%:27:1.949E-3:37:16:8:8:24 0/1:43:9:1:8:22:40.91%:31:7.0165E-4:36:13:8:5:23 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:38:1:0:1:28:3.57%:41:5E-1:37:27:15:12:29 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:23 0/1:35:8:3:5:25:32%:26:2.0146E-3:36:17:4:13:27 0/0:32:4:1:3:20:20%:13:5.3015E-2:36:16:9:7:20 0/0:0:0:0:0:23:0%:44:1E0:37:23:8:15:23 0/0:0:0:0:0:18:0%:32:1E0:35:18:4:14:18 0/0:36:6:3:3:46:13.04%:39:1.3136E-2:37:40:14:26:49 0/0:37:5:3:2:44:11.36%:41:2.7721E-2:36:39:13:26:45 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/1:36:7:4:3:21:33.33%:23:4.3101E-3:37:14:4:10:23 0/1:35:8:5:3:34:23.53%:26:2.4562E-3:36:26:7:19:36 0/1:35:8:3:5:30:26.67%:26:2.2875E-3:35:22:5:17:31 0/1:34:13:8:5:46:28.26%:43:4.5578E-5:36:33:11:22:47 0/0:37:6:5:1:29:20.69%:18:1.1736E-2:36:23:7:16:29 0/0:0:0:0:0:32:0%:59:1E0:36:32:15:17:33 0/0:37:5:2:3:29:17.24%:22:2.5917E-2:36:24:8:16:30 0/0:0:0:0:0:25:0%:48:1E0:36:25:8:17:25 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:25 0/0:34:5:4:1:30:16.67%:21:2.6093E-2:37:25:8:17:31 0/0:0:0:0:0:15:0%:29:1E0:35:15:5:10:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:5:14:19 0/0:34:5:4:1:20:25%:10:2.3562E-2:36:15:7:8:21 0/0:36:3:3:0:34:8.82%:37:1.194E-1:37:31:7:24:36 0/1:37:10:4:6:31:32.26%:33:4.1251E-4:37:21:6:15:31 0/0:60:2:1:1:26:7.69%:30:2.451E-1:37:24:4:20:26 0/0:36:5:3:2:39:12.82%:35:2.7273E-2:37:34:10:24:39 0/0:36:3:1:2:19:15.79%:17:1.1486E-1:36:16:2:14:20 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:17 0/0:33:1:0:1:19:5.26%:28:5E-1:38:18:9:9:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:3:15:18 0/1:39:9:8:1:37:24.32%:29:1.1256E-3:37:28:8:20:37 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:17 0/0:35:3:0:3:24:12.5%:22:1.1702E-1:37:21:7:14:25 0/1:36:8:6:2:36:22.22%:25:2.5282E-3:37:28:7:21:36 0/1:35:12:6:6:44:27.27%:39:1.027E-4:37:32:11:21:44 0/1:44:9:7:2:54:16.67%:28:1.3495E-3:37:44:11:33:56 0/0:0:0:0:0:32:0%:59:1E0:36:32:10:22:32 MTB_anc 1612624 . T G . PASS AC=12;AF=0.500;AN=24;ANN=G|synonymous_variant|LOW|Rv1435c_Rv1435c|gene1469|transcript|Transcript_gene1469|Coding|1/1|c.327A>C|p.Ile109Ile|327/609|327/609|109/202||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1612624T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1612624T>G||||||;HET=1;HOM=0;NC=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. ./. ./. ./. 0/1:43:6:2:4:14:42.86%:22:5.418E-3:35:4:0:4:14 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:41:7:4:3:13:53.85%:31:6.993E-4:34:1:0:1:14 ./. ./. ./. ./. ./. 0/1:41:9:5:4:29:31.03%:32:6.1425E-4:37:11:1:10:30 ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:36:6:4:2:15:40%:22:5.418E-3:37:4:1:3:16 ./. ./. 0/1:35:8:6:2:23:34.78%:30:9.6618E-4:41:6:3:3:23 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:38:12:7:5:23:52.17%:50:8.0605E-6:37:4:1:3:25 ./. 0/1:38:11:7:4:32:34.38%:40:9.1981E-5:37:11:3:8:34 ./. ./. ./. ./. ./. ./. ./. 0/1:41:9:4:5:23:39.13%:34:3.4983E-4:35:6:2:4:23 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:37:7:5:2:21:33.33%:25:2.8986E-3:36:7:3:4:21 ./. ./. 0/1:32:7:3:4:20:35%:25:2.8986E-3:35:7:2:5:21 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:42:10:1:9:23:43.48%:40:9.995E-5:33:5:4:1:23 ./. ./. ./. ./. 0/1:34:10:5:5:25:40%:38:1.4831E-4:36:7:0:7:28 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. MTB_anc 1612624 . T TATCGGTACCGGTGCGCCAGGG . PASS AC=146;AF=0.541;AN=270;ANN=TATCGGTACCGGTGCGCCAGGG|disruptive_inframe_insertion|MODERATE|Rv1435c_Rv1435c|gene1469|transcript|Transcript_gene1469|Coding|1/1|c.306_326dupCCCTGGCGCACCGGTACCGAT|p.Ile109_Pro110insProGlyAlaProValProIle|326/609|326/609|109/202||,TATCGGTACCGGTGCGCCAGGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1612624_1612625insATCGGTACCGGTGCGCCAGGG||||||,TATCGGTACCGGTGCGCCAGGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1612624_1612625insATCGGTACCGGTGCGCCAGGG||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:23:14:9:36:62.16%:97:1.9117E-10:36:9:1:8:37 0/1:39:9:5:4:18:50%:34:3.4983E-4:37:6:3:3:18 0/1:35:18:11:7:28:64.29%:77:1.8413E-8:36:6:3:3:28 0/0:40:5:3:2:18:27.78%:4:1.9565E-2:34:8:2:6:18 0/1:35:16:5:11:32:48.48%:67:1.7905E-7:36:6:2:4:34 ./. 0/1:37:16:5:11:19:84.21%:73:4.357E-8:44:3:0:3:19 0/1:38:12:6:6:22:54.55%:50:8.0605E-6:34:4:2:2:23 0/1:35:10:6:4:24:41.67%:37:1.9541E-4:38:9:4:5:24 0/1:36:9:4:5:21:42.86%:33:4.6348E-4:39:8:5:3:21 0/1:39:13:7:6:17:76.47%:55:2.5647E-6:32:4:1:3:17 0/1:37:18:12:6:37:48.65%:68:1.5143E-7:36:15:7:8:37 0/1:40:8:3:5:11:72.73%:32:5.16E-4:35:3:0:3:11 0/1:39:16:10:6:31:51.61%:60:8.4872E-7:36:13:3:10:31 0/1:37:8:3:5:24:33.33%:28:1.5455E-3:36:11:7:4:24 0/1:36:20:9:11:33:60.61%:84:3.9563E-9:36:8:5:3:33 0/1:37:17:8:9:19:89.47%:82:5.9414E-9:34:2:1:1:19 ./. 0/1:40:19:10:9:23:82.61%:86:2.1316E-9:36:4:1:3:23 0/1:36:9:4:5:21:40.91%:36:2.2883E-4:43:4:3:1:22 0/1:36:8:4:4:25:32%:28:1.4461E-3:39:10:1:9:26 0/1:35:17:8:9:43:39.53%:67:1.7891E-7:36:10:7:3:44 0/1:39:12:2:10:24:50%:48:1.4831E-5:39:6:2:4:25 ./. 0/1:36:16:5:11:33:48.48%:67:1.7905E-7:37:6:1:5:33 1/1:43:10:5:5:11:90.91%:47:1.7011E-5:37:1:0:1:11 0/1:39:11:4:7:19:57.89%:46:2.4988E-5:34:4:1:3:19 0/1:39:8:3:5:12:66.67%:32:5.16E-4:35:3:2:1:12 0/1:33:9:3:6:10:81.82%:39:1.1057E-4:36:2:1:1:11 0/1:37:12:6:6:26:46.15%:46:2.2548E-5:36:8:5:3:27 0/1:39:13:2:11:29:44.83%:48:1.2938E-5:39:11:6:5:29 0/1:37:10:6:4:25:40%:38:1.4831E-4:39:7:2:5:26 0/1:35:16:6:10:29:55.17%:64:3.2617E-7:39:8:3:5:29 ./. 0/1:37:18:5:13:23:78.26%:79:1.1937E-8:32:5:1:4:24 0/1:36:17:6:11:34:50%:68:1.4238E-7:36:9:3:6:34 ./. 0/1:36:23:11:12:42:54.76%:94:3.5675E-10:36:11:5:6:42 0/1:33:14:4:10:19:66.67%:60:8.0605E-7:38:4:1:3:23 0/1:38:19:3:16:42:45.24%:72:5.5375E-8:38:15:3:12:42 0/1:36:8:3:5:21:36.36%:28:1.3389E-3:35:9:3:6:22 0/1:39:10:2:8:28:35.71%:36:2.3971E-4:35:11:4:7:28 0/1:36:8:3:5:25:32%:27:1.638E-3:39:12:3:9:25 0/1:39:7:4:3:17:41.18%:25:2.6087E-3:37:6:2:4:18 1/1:37:22:10:12:23:95.65%:99:2.9149E-12:36:1:0:1:23 0/1:41:16:8:8:30:53.33%:66:2.4726E-7:35:7:2:5:30 0/1:35:11:4:7:24:44%:41:7.2653E-5:39:9:4:5:25 0/1:36:32:11:21:36:84.21%:99:4.8717E-16:35:5:2:3:39 0/1:36:23:10:13:40:57.5%:97:1.9117E-10:36:9:4:5:41 0/1:38:24:6:18:27:88.89%:99:2.0853E-12:37:3:1:2:28 0/1:39:9:7:2:15:60%:37:1.6826E-4:36:3:1:2:16 0/1:35:14:5:9:36:38.89%:52:5.4595E-6:34:12:4:8:36 1/1:36:15:8:7:16:93.75%:75:2.8282E-8:33:1:1:0:16 0/1:36:15:6:9:19:78.95%:68:1.4655E-7:35:3:0:3:19 ./. 0/1:38:17:5:12:39:43.59%:65:3.0928E-7:36:13:4:9:39 ./. 0/1:37:8:2:6:17:47.06%:30:9.6618E-4:36:6:3:3:17 0/1:35:23:9:14:27:85.19%:99:7.3681E-12:36:3:1:2:27 0/1:37:28:11:17:31:87.5%:99:1.2857E-14:36:3:0:3:32 0/1:39:10:5:5:23:43.48%:38:1.4831E-4:37:7:2:5:23 1/1:37:19:11:8:20:95%:98:1.5234E-10:33:1:1:0:20 0/1:36:11:5:6:25:44%:42:6.2811E-5:37:8:2:6:26 0/1:35:15:7:8:16:88.24%:71:7.3277E-8:36:2:1:1:17 ./. 0/1:35:28:12:16:47:58.33%:99:1.9197E-12:35:12:7:5:48 1/1:39:24:9:15:25:96%:99:2.0568E-13:33:1:0:1:25 0/1:38:20:9:11:24:83.33%:95:3.1579E-10:37:3:1:2:24 0/1:39:9:4:5:24:37.5%:32:5.1645E-4:35:9:5:4:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:39:11:3:8:16:68.75%:47:1.6951E-5:38:3:1:2:16 0/1:41:13:3:10:25:52%:50:9.5813E-6:37:9:6:3:25 0/1:37:6:4:2:10:60%:24:3.4965E-3:38:2:1:1:10 0/1:38:18:11:7:20:85.71%:84:3.7603E-9:36:3:1:2:21 0/1:35:16:3:13:34:47.06%:63:4.1493E-7:36:9:6:3:35 0/1:40:14:6:8:16:87.5%:65:2.5454E-7:34:2:2:0:16 0/1:35:18:6:12:20:85.71%:87:1.6758E-9:35:2:1:1:21 0/1:36:12:7:5:22:54.55%:50:8.0605E-6:37:4:1:3:22 0/1:38:13:4:9:28:46.43%:50:9.5813E-6:35:9:6:3:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 0/1:35:10:6:4:17:58.82%:40:9.995E-5:36:5:4:1:17 0/1:37:26:13:13:29:86.67%:99:3.9214E-13:35:4:1:3:30 1/1:39:18:6:12:19:94.74%:92:5.6585E-10:38:1:0:1:19 0/1:37:8:5:3:17:47.06%:30:9.6618E-4:39:6:2:4:17 0/1:38:16:4:12:35:45.71%:60:8.4872E-7:36:13:6:7:35 0/1:35:16:7:9:39:41.03%:61:7.3043E-7:37:12:6:6:40 0/1:35:11:5:6:27:40.74%:42:6.2811E-5:36:8:2:6:30 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:20:9:11:22:90.91%:98:1.3117E-10:36:2:1:1:22 0/1:37:9:6:3:17:52.94%:35:2.8986E-4:34:5:2:3:18 0/1:36:13:9:4:27:48.15%:49:1.1242E-5:39:10:3:7:27 0/1:46:8:3:5:17:47.06%:30:8.238E-4:36:5:3:2:17 0/1:37:19:8:11:34:55.88%:73:3.9837E-8:37:13:2:11:35 0/1:38:9:3:6:19:47.37%:33:4.0786E-4:36:7:2:5:19 0/1:36:17:7:10:35:47.22%:68:1.4238E-7:37:9:7:2:36 ./. 0/1:34:17:9:8:21:77.27%:78:1.2848E-8:38:3:1:2:22 0/1:36:8:2:6:23:34.78%:29:1.2236E-3:34:8:3:5:23 ./. 0/1:37:14:3:11:22:63.64%:60:8.0605E-7:37:4:2:2:23 0/1:38:20:5:15:23:86.96%:95:3.1579E-10:38:3:1:2:23 0/1:38:15:6:9:26:57.69%:62:5.4994E-7:37:6:0:6:26 0/1:33:9:3:6:26:33.33%:32:5.1645E-4:37:9:3:6:27 0/1:35:9:7:2:13:64.29%:35:2.8986E-4:36:5:4:1:14 0/1:35:8:2:6:9:88.89%:36:2.0568E-4:34:1:0:1:9 0/1:37:16:5:11:26:61.54%:66:2.4726E-7:36:7:4:3:27 0/1:36:15:5:10:24:62.5%:64:3.8543E-7:38:5:2:3:24 0/1:35:12:9:3:22:52.17%:49:1.1285E-5:36:5:2:3:23 0/1:36:17:9:8:32:53.12%:68:1.4238E-7:37:9:7:2:32 0/1:35:9:5:4:23:39.13%:34:3.4983E-4:36:6:3:3:23 ./. 0/1:35:16:5:11:18:84.21%:73:4.357E-8:34:3:3:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:15:10:5:29:51.72%:56:2.0087E-6:35:12:5:7:29 0/1:34:18:9:9:21:81.82%:81:7.1052E-9:37:4:0:4:22 ./. 0/1:37:9:5:4:21:42.86%:34:3.4983E-4:36:6:3:3:22 0/1:34:19:7:12:22:82.61%:89:1.0931E-9:35:3:1:2:23 1/1:35:17:4:13:18:94.44%:86:2.0936E-9:33:1:0:1:18 0/1:38:26:8:18:52:50%:99:4.7626E-11:35:16:6:10:52 0/1:35:28:12:16:44:62.22%:99:1.3724E-12:37:11:2:9:45 0/1:37:18:4:14:21:85.71%:84:3.7603E-9:38:3:3:0:21 0/1:35:8:2:6:22:36.36%:29:1.0995E-3:37:7:4:3:24 0/1:36:14:6:8:32:43.75%:54:3.4067E-6:34:9:1:8:35 0/1:36:9:2:7:28:32.14%:31:7.0165E-4:35:13:4:9:30 0/1:35:22:8:14:46:46.81%:88:1.3675E-9:35:12:3:9:47 0/1:35:15:2:13:28:53.57%:61:7.4178E-7:34:7:4:3:30 0/1:33:27:12:15:28:84.38%:99:1.125E-13:32:4:3:1:33 0/1:37:14:6:8:30:46.67%:53:4.0663E-6:34:10:2:8:30 0/1:34:22:8:14:23:88%:99:2.5916E-11:33:3:0:3:25 0/1:34:18:10:8:22:75%:77:1.8413E-8:34:6:1:5:25 0/1:36:13:3:10:30:43.33%:47:1.6379E-5:36:13:5:8:32 0/1:36:12:5:7:15:80%:52:5.2605E-6:35:3:0:3:15 1/1:36:16:5:11:17:94.12%:81:7.7134E-9:38:1:0:1:19 0/1:35:6:5:1:21:28.57%:20:8.837E-3:36:10:3:7:21 0/1:36:18:3:15:36:50%:68:1.5143E-7:36:15:4:11:36 0/1:37:14:5:9:32:43.75%:57:1.6702E-6:37:6:1:5:32 0/1:37:15:3:12:26:57.69%:59:1.196E-6:38:9:1:8:26 0/1:38:17:4:13:39:43.59%:63:4.6376E-7:36:16:5:11:39 0/1:37:9:1:8:20:45%:33:4.6348E-4:37:8:1:7:20 0/1:36:12:8:4:17:66.67%:48:1.4831E-5:37:6:2:4:18 0/1:36:15:8:7:18:78.95%:68:1.4655E-7:35:3:1:2:19 0/1:38:14:3:11:17:82.35%:65:2.5454E-7:33:2:0:2:18 0/1:34:20:5:15:35:54.05%:84:3.9563E-9:37:8:3:5:37 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:36:17:6:11:25:68%:74:3.8368E-8:38:5:1:4:25 0/1:37:22:6:16:37:59.46%:99:1.0343E-10:35:5:1:4:37 0/1:38:19:8:11:44:43.18%:73:3.9837E-8:36:13:3:10:44 0/1:37:25:7:18:52:48.08%:97:1.977E-10:36:18:5:13:55 1/1:36:28:9:19:30:90.32%:99:1.2857E-14:33:3:1:2:31 MTB_anc 1612648 . T C . PASS AC=30;AF=0.101;AN=296;ANN=C|synonymous_variant|LOW|Rv1435c_Rv1435c|gene1469|transcript|Transcript_gene1469|Coding|1/1|c.303A>G|p.Pro101Pro|303/609|303/609|101/202||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1612648T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1612648T>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:36:6:1:5:36:16.67%:25:1.2467E-2:39:30:20:10:37 0/0:36:5:2:3:19:26.32%:10:2.3166E-2:44:14:10:4:20 0/0:38:4:2:2:26:15.38%:20:5.5222E-2:39:22:13:9:27 0/0:36:4:1:3:15:26.67%:8:4.9808E-2:42:11:5:6:15 0/0:37:5:1:4:35:14.29%:30:2.6822E-2:37:30:14:16:37 0/0:38:2:0:2:12:16.67%:10:2.3913E-1:39:10:6:4:13 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 0/0:35:3:1:2:23:13.04%:22:1.1667E-1:41:20:13:7:23 0/0:36:6:4:2:24:25%:11:1.0968E-2:38:18:12:6:24 0/0:43:4:2:2:21:19.05%:15:5.3471E-2:42:17:8:9:21 0/0:38:1:0:1:19:5.26%:28:5E-1:41:18:8:10:19 0/1:35:11:5:6:39:28.21%:36:2.1547E-4:37:28:17:11:40 0/0:34:1:0:1:11:9.09%:14:5E-1:47:10:5:5:11 0/1:35:9:3:6:34:26.47%:29:1.0644E-3:39:25:13:12:34 0/0:37:6:4:2:23:26.09%:11:1.0777E-2:41:17:10:7:23 0/0:36:6:4:2:32:18.75%:20:1.2087E-2:38:26:13:13:32 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:19 0/0:30:1:0:1:14:7.14%:17:5E-1:41:13:5:8:14 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:21 0/0:45:3:2:1:24:12.5%:22:1.1702E-1:39:21:11:10:24 0/0:41:6:0:6:27:22.22%:16:1.1461E-2:37:21:10:11:27 0/1:35:8:6:2:43:18.6%:25:2.7329E-3:38:35:17:18:44 0/0:40:6:3:3:32:18.75%:20:1.2087E-2:42:26:12:14:32 0/1:36:7:1:6:29:24.14%:22:5.1909E-3:40:22:11:11:30 0/0:37:4:0:4:36:11.11%:34:5.7257E-2:38:32:17:15:37 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:15 0/0:38:1:0:1:18:5.56%:24:5E-1:39:17:7:10:18 0/0:0:0:0:0:12:0%:21:1E0:39:12:5:7:12 0/0:38:2:1:1:13:15.38%:13:2.4E-1:38:11:5:6:15 0/0:38:3:1:2:27:11.11%:28:1.1792E-1:40:24:10:14:27 0/0:35:5:3:2:26:19.23%:17:2.531E-2:41:21:6:15:26 0/0:44:3:0:3:28:10.71%:28:1.1818E-1:38:25:13:12:28 0/0:39:6:2:4:33:18.18%:23:1.219E-2:40:27:11:16:33 0/0:38:3:1:2:13:23.08%:9:1.1E-1:38:10:4:6:16 0/0:32:1:0:1:20:5%:27:5E-1:38:19:8:11:20 0/1:38:7:1:6:36:19.44%:22:5.6667E-3:38:29:13:16:36 0/0:42:5:3:2:29:17.24%:22:2.5917E-2:39:24:12:12:31 0/0:36:4:2:2:39:10.26%:41:5.7662E-2:39:35:16:19:39 0/0:35:4:0:4:22:18.18%:15:5.3885E-2:38:18:8:10:22 0/1:39:11:3:8:43:25.58%:36:2.3512E-4:40:32:12:20:43 0/0:35:3:1:2:20:15%:16:1.1538E-1:40:17:8:9:20 0/1:37:9:3:6:30:30%:30:9.678E-4:43:21:11:10:30 0/1:35:7:1:6:25:28%:23:4.8126E-3:41:18:8:10:25 0/0:37:5:2:3:20:25%:10:2.3562E-2:40:15:5:10:21 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:29 0/0:36:3:1:2:28:10.71%:28:1.1818E-1:40:25:14:11:29 0/0:36:5:3:2:24:20.83%:14:2.4823E-2:41:19:10:9:24 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:35:3:0:3:41:7.32%:50:1.2037E-1:38:38:19:19:41 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:23 0/0:35:3:1:2:16:18.75%:11:1.129E-1:45:13:8:5:16 0/1:36:8:3:5:39:20.51%:25:2.624E-3:37:31:14:17:39 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:20 0/0:34:1:0:1:22:4.55%:31:5E-1:38:21:11:10:22 0/0:36:5:2:3:27:18.52%:19:2.5527E-2:39:22:12:10:27 0/1:35:9:3:6:43:20.93%:29:1.2263E-3:39:34:15:19:43 0/1:37:7:1:6:31:22.58%:22:5.3469E-3:41:24:13:11:32 0/0:35:4:1:3:18:22.22%:10:5.1948E-2:37:14:6:8:18 0/0:0:0:0:0:29:0%:51:1E0:39:28:15:13:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:26 0/0:36:6:2:4:24:25%:11:1.0968E-2:40:18:8:10:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:26 0/0:35:4:1:3:24:16.67%:18:5.461E-2:39:20:9:11:24 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:17 0/0:36:2:1:1:20:10%:21:2.4359E-1:41:18:8:10:20 0/1:37:7:4:3:50:14%:22:6.2398E-3:39:43:21:22:50 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:26 0/0:0:0:0:0:22:0%:40:1E0:39:22:6:16:22 0/0:37:4:4:0:21:19.05%:15:5.3471E-2:41:17:10:7:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:38:3:1:2:19:15.79%:17:1.1486E-1:39:16:5:11:19 0/1:36:7:6:1:24:29.17%:23:4.7006E-3:43:17:4:13:24 0/0:35:1:1:0:10:10%:11:5E-1:42:9:6:3:10 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/1:35:8:6:2:36:22.22%:25:2.5282E-3:38:28:13:15:36 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:38:1:1:0:34:2.94%:51:5E-1:37:33:12:21:34 0/0:36:3:1:2:24:12.5%:22:1.1702E-1:40:21:11:10:24 0/0:35:4:2:2:27:14.81%:23:5.5494E-2:39:23:8:15:27 0/0:38:2:1:1:11:18.18%:10:2.381E-1:37:9:6:3:12 0/0:0:0:0:0:13:0%:25:1E0:38:13:9:4:14 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/0:0:0:0:0:15:0%:29:1E0:40:15:7:8:15 0/0:37:4:2:2:19:21.05%:13:5.251E-2:40:15:7:8:19 0/1:35:10:5:5:36:27.78%:33:4.7404E-4:39:26:12:14:36 0/1:36:7:4:3:36:19.44%:22:5.6667E-3:39:29:10:19:37 0/0:37:4:0:4:27:14.81%:23:5.5494E-2:39:23:14:9:28 0/0:0:0:0:0:12:0%:21:1E0:38:12:8:4:12 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:38:1:0:1:17:5.88%:24:5E-1:40:16:13:3:17 0/0:36:6:2:4:27:22.22%:16:1.1461E-2:40:21:13:8:27 0/0:35:3:2:1:16:18.75%:11:1.129E-1:46:13:4:9:17 0/1:37:10:1:9:37:27.03%:33:4.8486E-4:38:27:14:13:37 0/0:36:6:3:3:21:28.57%:9:1.0344E-2:40:15:7:8:21 0/0:37:6:5:1:36:16.67%:25:1.2467E-2:39:30:15:15:37 0/0:37:3:3:0:22:13.64%:19:1.1628E-1:39:19:11:8:22 0/0:34:2:1:1:23:8.7%:28:2.4444E-1:39:21:12:9:23 0/0:37:4:1:3:22:18.18%:15:5.3885E-2:37:18:7:11:24 0/0:35:4:1:3:18:22.22%:10:5.1948E-2:37:14:7:7:18 0/0:38:4:3:1:23:17.39%:18:5.4264E-2:39:19:6:13:24 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:19 0/0:36:4:0:4:26:15.38%:20:5.5222E-2:40:22:11:11:26 0/1:36:7:2:5:28:25%:22:5.1054E-3:37:21:10:11:28 0/0:0:0:0:0:19:0%:37:1E0:38:19:16:3:19 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:10 0/0:36:4:2:2:27:14.81%:23:5.5494E-2:38:23:10:13:27 0/0:37:5:2:3:27:18.52%:19:2.5527E-2:38:22:10:12:27 0/0:35:2:1:1:23:8.7%:28:2.4444E-1:38:21:14:7:23 0/1:35:8:6:2:33:24.24%:26:2.4173E-3:38:25:12:13:34 0/0:36:3:1:2:22:13.64%:19:1.1628E-1:39:19:9:10:22 0/0:38:1:1:0:20:5%:27:5E-1:41:19:5:14:20 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:9:3:6:31:29.03%:30:9.9376E-4:37:22:13:9:31 0/0:38:1:0:1:23:4.35%:34:5E-1:37:22:14:8:23 0/0:34:5:1:4:29:17.24%:22:2.5917E-2:37:24:11:13:29 0/0:35:5:2:3:23:21.74%:14:2.4548E-2:37:18:10:8:23 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 0/1:37:10:3:7:49:20.41%:32:5.8675E-4:40:39:14:25:50 0/0:35:6:1:5:42:14.29%:33:1.2905E-2:38:36:16:20:42 0/0:38:1:1:0:22:4.55%:31:5E-1:41:21:8:13:23 0/1:36:7:3:4:26:26.92%:23:4.9169E-3:37:19:9:10:27 0/1:33:7:1:6:38:18.42%:22:5.7727E-3:38:31:16:15:40 0/1:35:8:3:5:27:29.63%:26:2.1337E-3:37:19:6:13:27 0/0:35:5:1:4:46:10.87%:44:2.7874E-2:37:41:21:20:46 0/0:32:5:3:2:29:17.24%:22:2.5917E-2:38:24:7:17:30 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:27 0/0:36:6:2:4:32:18.75%:20:1.2087E-2:38:26:10:16:32 0/0:0:0:0:0:21:0%:40:1E0:38:21:5:16:22 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:19 0/1:36:11:5:6:34:32.35%:37:1.8662E-4:37:23:11:12:35 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:12 0/0:38:1:0:1:24:4.17%:34:5E-1:39:23:12:11:25 0/0:36:5:1:4:23:21.74%:14:2.4548E-2:38:18:16:2:23 0/1:35:13:4:9:34:38.24%:45:2.9583E-5:37:21:6:15:35 0/0:36:5:0:5:33:15.15%:27:2.6557E-2:38:28:12:16:35 0/0:36:6:0:6:26:23.08%:13:1.1309E-2:41:20:6:14:26 0/1:36:9:4:5:34:26.47%:29:1.0644E-3:39:25:10:15:35 0/0:37:6:1:5:22:27.27%:9:1.057E-2:37:16:4:12:22 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:20 0/0:38:1:1:0:20:5%:27:5E-1:40:19:10:9:21 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:20 0/1:36:7:2:5:38:18.42%:22:5.7727E-3:39:31:14:17:39 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:26 0/0:34:4:1:3:28:14.29%:23:5.5746E-2:37:24:8:16:28 0/0:36:4:1:3:39:10.26%:41:5.7662E-2:38:35:14:21:39 0/1:36:8:2:6:43:18.6%:25:2.7329E-3:38:35:15:20:43 0/1:36:10:1:9:51:19.61%:32:5.9987E-4:40:41:19:22:51 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:28 MTB_anc 1618978 . C T . PASS AC=248;AF=1.00;AN=248;ANN=T|missense_variant|MODERATE|PE_PGRS26_Rv1441c|gene1475|transcript|Transcript_gene1475|Coding|1/1|c.707G>A|p.Gly236Asp|707/1476|707/1476|236/491||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1618978C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1618978C>T||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:9:6:3:10:90%:42:5.9538E-5:34:1:0:1:10 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:32:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:14:13:1:15:93.33%:69:1.0315E-7:26:1:0:1:15 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:22:21:1:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:16:16:0:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:19:19:0:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:33:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:17:11:6:18:94.44%:86:2.0936E-9:27:1:0:1:18 1/1:37:22:21:1:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:16:15:1:17:94.12%:81:7.7134E-9:38:1:1:0:17 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 MTB_anc 1619109 . C A . PASS AC=282;AF=1.00;AN=282;ANN=A|synonymous_variant|LOW|PE_PGRS26_Rv1441c|gene1475|transcript|Transcript_gene1475|Coding|1/1|c.576G>T|p.Gly192Gly|576/1476|576/1476|192/491||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1619109C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1619109C>A||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:18:11:7:19:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:27 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:24:17:7:25:100%:99:3.101E-14:0:0:0:0:29 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:11 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:11 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 MTB_anc 1621073 . TCCA T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|disruptive_inframe_deletion|MODERATE|bisC_Rv1442|gene1476|transcript|Transcript_gene1476|Coding|1/1|c.1293_1295delCCA|p.His431del|1293/2301|1293/2301|431/766||INFO_REALIGN_3_PRIME,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1621074_1621076delCCA||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1621074_1621076delCCA||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:44:48:31:17:51 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:46:0%:85:1E0:48:46:22:24:47 0/0:0:0:0:0:45:0%:85:1E0:47:45:29:16:45 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:32:1:1:0:30:3.33%:44:5E-1:47:29:16:13:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:31 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:56:0%:99:1E0:45:56:25:31:57 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:31 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:20 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:43 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:29 0/0:0:0:0:0:36:0%:66:1E0:47:36:13:23:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:37 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:26 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:20 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:16:20:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:33 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:10:20:30 0/0:39:1:1:0:33:3.03%:52:5E-1:43:32:12:20:36 0/0:0:0:0:0:68:0%:99:1E0:45:68:33:35:68 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:50:0%:92:1E0:44:50:20:30:51 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:39 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:25 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:40 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:40 0/0:0:0:0:0:17:0%:33:1E0:48:17:7:10:17 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:22 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:45 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:20:0%:36:1E0:47:20:6:14:21 0/0:0:0:0:0:55:0%:99:1E0:44:55:22:33:55 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:46 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:30 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:13:29:42 0/0:0:0:0:0:64:0%:99:1E0:44:64:28:36:65 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:41:0%:78:1E0:50:41:23:18:41 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:46 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:44:0%:81:1E0:47:44:24:20:45 0/0:0:0:0:0:20:0%:36:1E0:46:20:7:13:20 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:43 0/0:0:0:0:0:20:0%:36:1E0:49:20:6:14:20 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:37 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:52 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:46 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:36 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:8:18:26 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:27 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:45 0/0:0:0:0:0:35:0%:67:1E0:39:35:24:11:38 0/0:0:0:0:0:48:0%:89:1E0:39:48:23:25:49 1/1:37:41:22:19:41:93.18%:99:6.1775E-22:40:3:0:3:44 0/0:0:0:0:0:48:0%:89:1E0:43:48:19:29:49 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:24 0/0:0:0:0:0:58:0%:99:1E0:42:58:25:33:58 0/0:0:0:0:0:67:0%:99:1E0:43:67:31:36:68 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:33 0/0:0:0:0:0:46:0%:85:1E0:39:46:24:22:47 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:49:0%:93:1E0:40:49:24:25:51 0/0:0:0:0:0:42:0%:77:1E0:40:42:27:15:43 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:39 0/0:0:0:0:0:59:0%:99:1E0:41:59:33:26:60 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:34 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:40 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:31 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:39 0/0:0:0:0:0:58:0%:99:1E0:38:58:23:35:59 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:49 0/0:0:0:0:0:47:0%:89:1E0:41:47:28:19:48 0/0:0:0:0:0:51:0%:97:1E0:41:51:21:30:51 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:38 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:43 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:47 0/0:0:0:0:0:52:0%:96:1E0:43:52:32:20:54 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 MTB_anc 1622964 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv1443c_Rv1443c-Rv1444c_Rv1444c|gene1477-gene1478|intergenic_region|gene1477-gene1478|||n.1622964C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:52:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:52:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:27:13:14:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:43:27:11:16:28:96.43%:99:3.7915E-15:60:1:0:1:30 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:47:29:14:15:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:53:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:47:32:15:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:57:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:59:22:37:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:59:36:23:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:60:39:21:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:38:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:49:28:21:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:60:31:29:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 MTB_anc 1625751 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|zwf2_Rv1447c|gene1481|transcript|Transcript_gene1481|Coding|1/1|c.1212G>A|p.Val404Val|1212/1545|1212/1545|404/514||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1625751C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1625751C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:49:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:50:15:35:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:26:14:12:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:52:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:34:17:17:35:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:37:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:38:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:61:32:29:61:100%:99:2.609E-36:0:0:0:0:63 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:64:35:29:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 1626539 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|synonymous_variant|LOW|zwf2_Rv1447c|gene1481|transcript|Transcript_gene1481|Coding|1/1|c.424C>T|p.Leu142Leu|424/1545|424/1545|142/514||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1626539G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1626539G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:51:0%:97:1E0:47:51:27:24:52 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 1/1:52:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 1/1:49:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:36:0%:66:1E0:49:36:15:21:36 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:49:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:30 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:31:0%:59:1E0:50:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:19:8:27 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:50:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:18 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:18:0%:32:1E0:47:18:5:13:18 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:0:0:0:0:29:0%:55:1E0:49:29:11:18:29 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:35 0/0:0:0:0:0:32:0%:59:1E0:47:32:10:22:32 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:70:33:37:70:100%:99:1.0659E-41:0:0:0:0:71 0/0:0:0:0:0:38:0%:70:1E0:49:38:17:21:38 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:31:0%:59:1E0:50:31:13:18:32 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 1/1:49:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 1/1:43:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:40:18:22:41:97.56%:99:9.8874E-23:35:1:1:0:41 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:30:18:12:31:96.77%:99:6.8754E-17:34:1:0:1:35 0/0:0:0:0:0:36:0%:66:1E0:47:36:23:13:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:54:0%:99:1E0:47:54:28:26:55 0/0:60:1:0:1:26:3.85%:38:5E-1:50:25:13:12:26 0/0:0:0:0:0:43:0%:82:1E0:50:43:23:20:43 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:29:0%:55:1E0:49:29:9:20:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 0/0:38:1:1:0:33:3.03%:52:5E-1:45:32:18:14:33 1/1:42:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:39:1:0:1:35:2.86%:55:5E-1:42:34:16:18:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:8:16:24 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 1/1:48:20:10:10:21:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 1/1:50:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:32:17:15:34:94.12%:99:2.2142E-17:49:2:1:1:34 1/1:42:51:23:28:52:98.08%:99:3.3479E-29:60:1:1:0:52 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:30 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:41 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:42 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:41 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:43 0/0:0:0:0:0:38:0%:70:1E0:38:38:17:21:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:27 0/0:0:0:0:0:66:0%:99:1E0:42:66:32:34:66 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:48 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:21 0/0:0:0:0:0:50:0%:92:1E0:41:50:24:26:50 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:44:0%:81:1E0:40:44:27:17:44 0/0:0:0:0:0:39:0%:74:1E0:38:39:23:16:40 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:42 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:32 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:55 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:38 0/0:0:0:0:0:39:0%:74:1E0:40:39:25:14:40 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 1/1:39:61:33:28:61:100%:99:2.609E-36:0:0:0:0:64 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:46:0%:85:1E0:45:46:21:25:46 0/0:0:0:0:0:32:0%:59:1E0:41:32:8:24:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:45 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 1630670 . AGCCACCGCC A . PASS AC=105;AF=0.350;AN=300;ANN=A|inframe_deletion|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3949_3957delGGCGGTGGC|p.Gly1317_Gly1319del|3957/3990|3949/3990|1317/1329||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1630671_1630679delGCCACCGCC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1630671_1630679delGCCACCGCC||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:36:19:17:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:58:1:0:1:32:3.12%:48:5E-1:39:30:21:9:37 1/1:40:18:11:7:20:90%:87:1.6758E-9:35:2:0:2:20 0/0:0:0:0:0:19:0%:37:1E0:35:19:12:7:22 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:10 1/1:38:22:17:5:23:95.65%:99:2.9149E-12:37:1:0:1:23 0/0:0:0:0:0:21:0%:40:1E0:38:21:14:7:23 0/1:39:16:12:4:18:88.89%:76:2.0936E-8:31:2:1:1:18 1/1:38:18:7:11:17:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:15:0%:29:1E0:43:15:13:2:15 1/1:40:21:12:9:22:95.45%:99:1.0931E-11:33:1:0:1:23 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:24:15:9:26:92.31%:99:7.6222E-13:35:2:0:2:26 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:13 0/0:0:0:0:0:15:0%:29:1E0:33:15:9:6:18 0/1:38:15:8:7:17:88.24%:71:7.3277E-8:31:2:1:1:17 1/1:37:11:6:5:12:91.67%:53:4.8074E-6:35:1:1:0:13 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:11 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:19 0/0:0:0:0:0:15:0%:29:1E0:36:15:8:7:16 1/1:36:27:14:13:28:93.1%:99:1.5465E-14:37:2:0:2:29 0/1:40:13:8:5:14:86.67%:60:8.7675E-7:29:2:1:1:15 0/1:32:16:8:8:14:88.89%:76:2.0936E-8:29:2:1:1:18 1/1:36:26:11:15:27:96.3%:99:1.4382E-14:35:1:1:0:28 0/0:60:1:0:1:17:5.88%:24:5E-1:37:16:11:5:19 0/1:40:16:9:7:18:88.89%:76:2.0936E-8:37:2:1:1:18 0/0:0:0:0:0:13:0%:25:1E0:34:13:9:4:15 1/1:42:21:11:10:22:95.45%:99:1.0931E-11:37:1:0:1:22 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:22 1/1:34:24:12:12:23:96%:99:2.0568E-13:37:1:0:1:25 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:17 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:22 0/1:37:22:17:5:26:84.62%:99:5.5261E-11:26:4:3:1:26 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:27 1/1:35:28:15:13:28:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:33:21:12:35:94.29%:99:5.9366E-18:34:2:0:2:35 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:25 1/1:38:25:15:10:27:92.59%:99:2.0853E-13:32:2:1:1:27 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:22 1/1:37:18:10:8:19:90%:87:1.6758E-9:46:2:2:0:20 0/1:36:22:13:9:25:88%:99:2.5916E-11:34:3:2:1:26 1/1:33:17:10:7:16:94.44%:86:2.0936E-9:35:1:1:0:18 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:28 1/1:39:23:10:13:23:95.83%:99:7.7525E-13:24:1:1:0:25 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:21 1/1:36:23:14:9:23:95.83%:99:7.7525E-13:34:1:0:1:24 0/1:35:22:13:9:25:81.48%:99:1.0343E-10:30:5:4:1:27 1/1:42:23:16:7:24:95.83%:99:7.7525E-13:60:1:1:0:24 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:47 1/1:37:23:11:12:22:100%:99:1.2146E-13:0:0:0:0:23 0/1:38:17:7:10:18:89.47%:82:5.9414E-9:30:2:2:0:19 0/1:37:16:9:7:18:88.89%:76:2.0936E-8:34:2:0:2:20 1/1:37:29:17:12:29:96.67%:99:2.6212E-16:37:1:0:1:31 1/1:38:21:14:7:20:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:17 1/1:37:23:8:15:24:92%:99:2.7767E-12:38:2:0:2:25 0/1:37:15:6:9:17:88.24%:71:7.3277E-8:32:2:1:1:17 0/0:0:0:0:0:36:0%:66:1E0:36:36:25:11:39 0/1:40:23:13:10:26:88.46%:99:7.3681E-12:34:3:2:1:27 1/1:34:30:16:14:28:96.77%:99:6.8754E-17:33:1:0:1:31 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:23 0/0:0:0:0:0:27:0%:52:1E0:38:27:17:10:27 0/0:0:0:0:0:39:0%:74:1E0:37:39:24:15:43 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:22 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:35 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 0/1:39:10:9:1:12:83.33%:44:3.3652E-5:37:2:0:2:12 1/1:35:17:10:7:17:94.44%:86:2.0936E-9:37:1:1:0:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:20 0/1:42:14:9:5:16:87.5%:65:2.5454E-7:48:2:1:1:16 0/0:0:0:0:0:17:0%:33:1E0:39:17:12:5:18 0/0:0:0:0:0:26:0%:47:1E0:36:26:17:9:28 0/1:38:7:3:4:8:87.5%:31:6.993E-4:33:1:0:1:8 0/1:35:20:7:13:23:83.33%:91:6.3493E-10:32:4:3:1:24 1/1:37:22:15:7:22:91.67%:99:1.0078E-11:46:2:1:1:24 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:17 1/1:40:18:9:9:19:94.74%:92:5.6585E-10:37:1:0:1:19 1/1:35:21:9:12:18:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:27 1/1:37:16:8:8:16:94.12%:81:7.7134E-9:37:1:0:1:17 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:23 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 1/1:45:11:5:6:12:91.67%:53:4.8074E-6:37:1:0:1:12 0/0:0:0:0:0:25:0%:48:1E0:37:25:18:7:25 1/1:43:19:13:6:20:95%:98:1.5234E-10:32:1:0:1:20 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:16 1/1:44:20:9:11:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:33:33:16:17:31:94.29%:99:5.9366E-18:33:2:1:1:35 1/1:36:24:15:9:23:96%:99:2.0568E-13:37:1:1:0:25 1/1:36:38:28:10:38:97.44%:99:1.4697E-21:33:1:1:0:39 0/1:39:12:10:2:16:75%:50:8.0605E-6:31:4:2:2:16 0/0:0:0:0:0:19:0%:37:1E0:35:19:12:7:22 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:25 0/0:0:0:0:0:24:0%:44:1E0:36:24:14:10:24 0/0:0:0:0:0:25:0%:48:1E0:36:25:17:8:27 0/0:0:0:0:0:24:0%:44:1E0:38:24:16:8:24 0/0:0:0:0:0:19:0%:37:1E0:35:19:11:8:21 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:17 0/0:0:0:0:0:10:0%:17:1E0:41:10:8:2:12 0/0:0:0:0:0:8:0%:14:1E0:34:8:7:1:10 0/0:0:0:0:0:20:0%:36:1E0:35:20:13:7:22 0/0:0:0:0:0:22:0%:40:1E0:38:22:15:7:23 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:33 0/0:0:0:0:0:29:0%:55:1E0:34:29:21:8:30 0/0:0:0:0:0:30:0%:55:1E0:37:30:17:13:30 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:29 0/0:0:0:0:0:17:0%:33:1E0:34:17:9:8:17 0/0:0:0:0:0:15:0%:29:1E0:35:15:10:5:17 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:21:0%:40:1E0:35:21:10:11:23 0/0:0:0:0:0:26:0%:47:1E0:36:26:20:6:30 0/0:0:0:0:0:20:0%:36:1E0:37:20:15:5:22 0/0:0:0:0:0:30:0%:55:1E0:35:30:20:10:31 0/0:0:0:0:0:17:0%:33:1E0:36:17:8:9:17 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:32 0/0:0:0:0:0:38:0%:70:1E0:37:38:21:17:39 0/0:0:0:0:0:28:0%:51:1E0:36:28:13:15:32 0/0:0:0:0:0:9:0%:18:1E0:32:9:7:2:12 0/0:0:0:0:0:20:0%:36:1E0:34:20:13:7:23 0/0:0:0:0:0:10:0%:17:1E0:34:10:3:7:13 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:17:5:24 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:25 0/0:0:0:0:0:16:0%:29:1E0:35:16:10:6:17 0/0:0:0:0:0:18:0%:32:1E0:34:18:9:9:21 0/0:0:0:0:0:8:0%:14:1E0:35:8:5:3:11 0/0:0:0:0:0:21:0%:40:1E0:35:21:14:7:22 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:16 0/0:0:0:0:0:19:0%:37:1E0:35:19:9:10:21 0/0:0:0:0:0:18:0%:32:1E0:37:18:13:5:20 0/0:0:0:0:0:20:0%:37:1E0:37:19:10:9:24 0/1:35:30:17:13:34:85.71%:99:5.8653E-15:33:5:3:2:35 1/1:36:20:12:8:21:90.91%:98:1.3117E-10:37:2:1:1:22 1/1:38:28:13:15:29:93.33%:99:4.194E-15:34:2:2:0:30 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:21 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:24 0/0:0:0:0:0:13:0%:25:1E0:34:13:6:7:17 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:14:8:25 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:25 0/0:0:0:0:0:18:0%:32:1E0:39:18:10:8:20 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:28 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:27 0/1:38:21:14:7:25:84%:97:1.8789E-10:41:4:0:4:25 1/1:40:15:5:10:16:93.75%:75:2.8282E-8:33:1:1:0:16 MTB_anc 1631399 . T C . PASS AC=116;AF=0.400;AN=290;ANN=C|missense_variant|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3229A>G|p.Ser1077Gly|3229/3990|3229/3990|1077/1329||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631399T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631399T>C||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:12:7:5:26:46.15%:43:4.6796E-5:36:14:12:2:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:16:12:4:34:47.06%:58:1.4997E-6:36:18:13:5:36 0/0:34:2:1:1:9:22.22%:7:2.3529E-1:44:7:4:3:9 0/1:37:9:6:3:17:52.94%:33:4.6348E-4:37:8:7:1:17 0/1:36:6:5:1:14:42.86%:20:7.971E-3:41:8:8:0:17 0/1:36:10:9:1:25:40%:34:3.1821E-4:38:15:12:3:25 0/1:39:7:5:2:21:33.33%:23:4.3101E-3:36:14:11:3:22 0/1:37:9:7:2:24:37.5%:31:7.7962E-4:37:15:13:2:26 0/1:42:12:7:5:27:44.44%:42:5.0681E-5:37:15:11:4:27 0/0:39:5:4:1:12:41.67%:3:1.8634E-2:37:7:6:1:12 0/1:38:11:7:4:31:35.48%:37:1.6659E-4:37:20:16:4:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:13:9:4:24:54.17%:48:1.2938E-5:37:11:9:2:24 0/1:40:6:4:2:18:33.33%:20:9.5308E-3:37:12:9:3:18 0/1:36:7:5:2:18:38.89%:24:3.8123E-3:37:11:8:3:18 0/1:40:8:4:4:17:47.06%:28:1.3389E-3:38:9:8:1:19 0/0:37:3:3:0:11:27.27%:7:1.0714E-1:37:8:5:3:11 0/1:35:10:6:4:17:58.82%:38:1.4831E-4:35:7:4:3:18 0/1:36:7:3:4:12:58.33%:26:2.2883E-3:37:5:3:2:12 0/1:36:7:5:2:13:53.85%:25:2.6087E-3:38:6:5:1:14 0/1:35:13:7:6:34:38.24%:45:2.9583E-5:37:21:13:8:34 0/0:36:4:4:0:15:26.67%:8:4.9808E-2:37:11:8:3:15 0/1:42:9:7:2:31:29.03%:30:9.9376E-4:37:22:16:6:31 0/1:37:10:6:4:29:34.48%:34:3.8387E-4:37:19:14:5:29 0/0:41:6:4:2:26:23.08%:13:1.1309E-2:39:20:13:7:26 0/0:43:4:2:2:15:26.67%:8:4.9808E-2:35:11:9:2:15 0/1:39:9:6:3:21:42.86%:31:6.592E-4:39:12:10:2:22 0/1:45:14:8:6:27:51.85%:52:6.1806E-6:37:13:9:4:31 0/1:37:12:7:5:22:54.55%:45:3.066E-5:36:10:6:4:23 0/1:37:13:8:5:31:41.94%:46:2.4825E-5:37:18:14:4:32 0/1:36:8:4:4:29:27.59%:26:2.2392E-3:39:21:20:1:30 0/1:41:10:5:5:20:50%:36:2.1796E-4:36:10:10:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:7:7:0:17:41.18%:24:3.6151E-3:37:10:7:3:18 0/1:38:11:7:4:35:31.43%:37:1.9282E-4:37:24:21:3:37 0/1:38:7:6:1:25:28%:23:4.8126E-3:38:18:11:7:25 0/1:35:14:8:6:38:36.84%:48:1.407E-5:37:24:20:4:38 0/1:42:8:5:3:26:30.77%:26:2.076E-3:37:18:15:3:26 0/1:35:19:15:4:33:57.58%:73:4.7323E-8:35:14:11:3:34 0/1:38:9:8:1:22:40.91%:31:7.0165E-4:36:13:9:4:23 0/1:41:9:6:3:21:42.86%:31:6.592E-4:38:12:8:4:21 0/1:38:11:6:5:21:52.38%:40:8.2399E-5:39:10:9:1:21 0/1:40:11:4:7:23:47.83%:39:1.0135E-4:36:12:10:2:24 0/1:36:13:9:4:29:44.83%:46:2.1506E-5:37:16:15:1:29 0/0:41:6:4:2:24:25%:11:1.0968E-2:36:18:15:3:24 0/0:37:5:5:0:12:41.67%:3:1.8634E-2:46:7:4:3:13 0/1:38:12:5:7:31:38.71%:41:6.5329E-5:37:19:18:1:32 0/1:36:11:6:5:30:36.67%:37:1.594E-4:36:19:19:0:30 0/1:40:11:6:5:26:42.31%:38:1.2791E-4:37:15:12:3:27 0/1:42:8:8:0:13:61.54%:30:8.238E-4:42:5:5:0:13 0/1:36:14:11:3:27:51.85%:52:6.1806E-6:38:13:12:1:27 0/0:38:2:2:0:15:13.33%:16:2.4138E-1:37:13:11:2:17 0/1:37:7:5:2:19:36.84%:23:3.9926E-3:36:12:10:2:19 0/1:37:13:6:7:25:52%:48:1.4654E-5:40:12:9:3:26 0/1:38:9:5:4:26:34.62%:30:8.4928E-4:38:17:13:4:26 0/1:37:12:10:2:27:44.44%:42:5.0681E-5:38:15:12:3:28 0/1:40:6:5:1:19:31.58%:20:9.828E-3:38:13:9:4:21 0/1:38:15:10:5:29:51.72%:55:2.6068E-6:40:14:12:2:31 0/1:41:14:9:5:34:41.18%:49:1.1295E-5:37:20:17:3:35 0/1:38:11:5:6:20:55%:41:7.2653E-5:37:9:8:1:20 0/1:34:8:4:4:24:33.33%:27:1.949E-3:37:16:11:5:25 0/1:42:8:7:1:22:36.36%:27:1.8042E-3:37:14:12:2:22 0/0:37:4:1:3:12:33.33%:4:4.6584E-2:37:8:6:2:12 0/0:34:5:5:0:17:29.41%:8:2.2239E-2:39:12:9:3:17 0/1:39:16:7:9:40:40%:56:2.3315E-6:38:24:16:8:41 0/0:36:3:3:0:18:16.67%:14:1.1429E-1:36:15:10:5:19 0/1:38:9:8:1:28:32.14%:30:9.1169E-4:37:19:16:3:31 0/0:45:3:2:1:16:18.75%:11:1.129E-1:37:13:10:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:42:8:4:4:22:36.36%:27:1.8042E-3:37:14:11:3:22 0/0:37:4:4:0:23:17.39%:18:5.4264E-2:40:19:16:3:25 0/0:35:4:2:2:14:28.57%:6:4.8889E-2:37:10:6:4:14 0/1:38:11:6:5:35:31.43%:37:1.9282E-4:38:24:20:4:35 0/1:34:8:2:6:29:27.59%:26:2.2392E-3:38:21:17:4:29 0/1:33:6:3:3:17:35.29%:20:9.2021E-3:37:11:9:2:19 0/0:36:5:2:3:17:29.41%:8:2.2239E-2:37:12:9:3:17 0/0:35:4:3:1:18:22.22%:10:5.1948E-2:37:14:11:3:18 0/0:36:5:1:4:16:31.25%:6:2.1691E-2:36:11:7:4:17 0/0:34:5:1:4:15:33.33%:6:2.1073E-2:37:10:8:2:15 0/0:37:5:4:1:11:45.45%:3:1.7544E-2:46:6:5:1:12 0/1:38:9:5:4:30:30%:30:9.678E-4:38:21:17:4:31 0/1:40:13:11:2:30:43.33%:46:2.3178E-5:37:17:15:2:31 0/1:42:7:2:5:16:43.75%:24:3.3988E-3:35:9:7:2:16 0/0:35:5:1:4:18:27.78%:8:2.2727E-2:38:13:11:2:18 0/0:46:5:3:2:14:35.71%:4:2.037E-2:37:9:8:1:15 0/1:35:8:3:5:26:30.77%:26:2.076E-3:36:18:16:2:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:10:8:2:16:62.5%:39:1.2413E-4:38:6:6:0:16 0/1:41:8:4:4:12:66.67%:31:6.7304E-4:37:4:4:0:12 0/1:36:11:6:5:24:45.83%:39:1.1047E-4:37:13:10:3:24 0/1:43:10:6:4:20:50%:36:2.1796E-4:37:10:10:0:21 0/1:36:9:6:3:33:27.27%:29:1.042E-3:37:24:21:3:34 0/1:40:8:5:3:19:42.11%:28:1.5455E-3:37:11:6:5:19 0/1:39:15:11:4:41:36.59%:51:6.364E-6:37:26:19:7:41 0/1:37:13:8:5:21:61.9%:50:7.9741E-6:38:8:7:1:21 0/0:35:5:5:0:13:38.46%:4:1.9565E-2:38:8:8:0:13 0/1:36:8:3:5:19:42.11%:28:1.5455E-3:37:11:9:2:21 0/1:37:10:7:3:23:43.48%:35:2.8066E-4:36:13:9:4:25 0/1:36:7:4:3:22:31.82%:23:4.4505E-3:37:15:13:2:23 0/1:37:10:5:5:26:38.46%:34:3.3576E-4:39:16:14:2:26 0/1:36:14:11:3:33:42.42%:49:1.0577E-5:37:19:16:3:34 0/1:35:7:6:1:16:43.75%:24:3.3988E-3:35:9:8:1:17 0/1:37:8:6:2:16:50%:29:1.2236E-3:36:8:7:1:16 0/1:39:6:5:1:13:46.15%:21:7.4534E-3:35:7:4:3:14 0/1:38:13:8:5:30:43.33%:46:2.3178E-5:36:17:10:7:30 0/1:37:13:10:3:33:39.39%:45:2.8029E-5:37:20:16:4:33 0/1:37:11:4:7:28:39.29%:38:1.4422E-4:37:17:15:2:28 0/1:36:14:11:3:32:43.75%:50:9.8512E-6:38:18:14:4:33 0/1:38:9:4:5:42:21.43%:29:1.2112E-3:37:33:29:4:43 0/1:37:12:7:5:35:34.29%:41:7.8434E-5:39:23:21:2:36 0/1:38:9:5:4:29:31.03%:30:9.4048E-4:36:20:18:2:30 0/0:37:5:3:2:11:45.45%:3:1.7544E-2:40:6:5:1:12 0/1:37:17:12:5:35:48.57%:62:5.7598E-7:38:18:12:6:35 0/1:37:7:4:3:23:30.43%:23:4.5803E-3:36:16:16:0:25 0/1:36:10:5:5:26:38.46%:34:3.3576E-4:36:16:15:1:29 0/1:39:7:7:0:15:46.67%:25:3.1609E-3:36:8:5:3:15 0/1:37:7:6:1:21:33.33%:23:4.3101E-3:37:14:13:1:21 0/0:36:5:4:1:13:38.46%:4:1.9565E-2:36:8:6:2:14 0/1:43:13:5:8:25:52%:48:1.4654E-5:37:12:8:4:25 0/1:37:19:11:8:41:46.34%:69:1.2413E-7:36:22:19:3:41 0/1:39:6:4:2:18:33.33%:20:9.5308E-3:37:12:11:1:19 0/1:41:10:5:5:21:47.62%:36:2.3971E-4:36:11:8:3:23 0/1:36:8:3:5:19:42.11%:28:1.5455E-3:37:11:8:3:19 0/1:37:15:9:6:21:71.43%:62:5.4994E-7:35:6:4:2:21 0/1:36:10:8:2:20:50%:36:2.1796E-4:37:10:9:1:21 0/0:35:5:4:1:19:26.32%:10:2.3166E-2:36:14:13:1:19 0/1:40:6:5:1:14:42.86%:20:7.971E-3:38:8:8:0:14 0/0:44:5:1:4:17:29.41%:8:2.2239E-2:37:12:10:2:18 0/1:40:9:7:2:17:52.94%:33:4.6348E-4:35:8:5:3:18 0/1:39:8:4:4:18:44.44%:28:1.4461E-3:36:10:9:1:18 0/1:36:8:6:2:23:34.78%:27:1.8791E-3:37:15:12:3:24 0/1:37:10:6:4:18:55.56%:37:1.7215E-4:37:8:7:1:19 0/1:38:9:3:6:20:45%:32:6.1425E-4:38:11:8:3:21 0/1:39:6:2:4:11:54.55%:22:6.192E-3:33:5:5:0:11 0/1:36:8:5:3:21:38.1%:27:1.7241E-3:37:13:12:1:21 0/1:34:10:6:4:23:43.48%:35:2.8066E-4:37:13:12:1:24 0/1:39:6:3:3:14:42.86%:20:7.971E-3:38:8:5:3:14 0/1:43:7:5:2:18:38.89%:24:3.8123E-3:41:11:11:0:21 0/1:41:11:7:4:31:35.48%:37:1.6659E-4:37:20:18:2:33 0/1:36:9:5:4:23:39.13%:31:7.4174E-4:37:14:12:2:23 0/1:37:6:0:6:11:54.55%:22:6.192E-3:36:5:4:1:12 0/1:37:8:4:4:16:50%:29:1.2236E-3:38:8:6:2:17 0/1:40:8:4:4:24:33.33%:27:1.949E-3:37:16:15:1:24 0/1:39:9:7:2:24:37.5%:31:7.7962E-4:36:15:13:2:25 0/1:41:6:5:1:16:37.5%:20:8.837E-3:36:10:9:1:16 0/1:38:10:7:3:22:45.45%:35:2.6061E-4:37:12:10:2:22 0/0:45:6:2:4:26:23.08%:13:1.1309E-2:37:20:18:2:27 0/1:36:12:7:5:26:46.15%:43:4.6796E-5:37:14:13:1:27 0/0:35:5:2:3:12:41.67%:3:1.8634E-2:37:7:5:2:12 MTB_anc 1631403 . G A . PASS AC=104;AF=0.361;AN=288;ANN=A|synonymous_variant|LOW|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3225C>T|p.Ala1075Ala|3225/3990|3225/3990|1075/1329||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631403G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631403G>A||||||;HOM=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:10:6:4:25:40%:34:3.1821E-4:35:15:13:2:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:16:11:5:34:47.06%:58:1.4997E-6:36:18:13:5:34 0/0:37:2:1:1:8:25%:5:2.3333E-1:36:6:4:2:8 0/1:35:9:6:3:18:50%:32:5.1645E-4:37:9:8:1:18 0/1:34:6:4:2:15:40%:20:8.4291E-3:39:9:8:1:16 0/1:35:9:8:1:26:34.62%:30:8.4928E-4:36:17:13:4:27 0/1:38:7:5:2:21:33.33%:23:4.3101E-3:35:14:12:2:21 0/1:35:8:6:2:25:32%:26:2.0146E-3:36:17:15:2:25 0/1:40:12:7:5:26:46.15%:43:4.6796E-5:36:14:10:4:26 0/0:38:5:4:1:12:41.67%:3:1.8634E-2:36:7:6:1:12 0/1:35:12:7:5:32:37.5%:41:6.8751E-5:36:20:16:4:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:11:8:3:21:52.38%:40:8.2399E-5:35:10:8:2:21 0/0:35:5:3:2:17:29.41%:8:2.2239E-2:36:12:10:2:17 0/1:35:6:4:2:15:40%:20:8.4291E-3:36:9:7:2:17 0/1:38:8:4:4:19:42.11%:28:1.5455E-3:36:11:9:2:20 0/0:37:2:2:0:10:20%:7:2.3684E-1:36:8:5:3:11 0/1:34:8:5:3:15:53.33%:29:1.0995E-3:35:7:4:3:16 0/1:35:7:3:4:13:53.85%:25:2.6087E-3:33:6:3:3:13 0/1:35:8:6:2:14:57.14%:30:9.6618E-4:34:6:5:1:14 0/1:34:9:5:4:29:31.03%:30:9.4048E-4:36:20:13:7:32 0/0:33:4:4:0:14:28.57%:6:4.8889E-2:36:10:7:3:15 0/1:37:9:7:2:31:29.03%:30:9.9376E-4:35:22:16:6:31 0/1:38:9:5:4:27:33.33%:30:8.8132E-4:35:18:13:5:28 0/0:35:6:4:2:25:24%:14:1.1145E-2:39:19:13:6:25 0/0:40:4:2:2:14:28.57%:6:4.8889E-2:37:10:9:1:14 0/1:38:7:5:2:18:38.89%:24:3.8123E-3:38:11:9:2:21 0/1:43:14:8:6:29:48.28%:51:7.6466E-6:33:15:11:4:31 0/1:36:10:6:4:20:50%:36:2.1796E-4:35:10:7:3:21 0/1:37:11:8:3:29:37.93%:38:1.5195E-4:36:18:15:3:30 0/1:36:9:5:4:28:32.14%:30:9.1169E-4:37:19:18:1:30 0/1:41:8:3:5:18:44.44%:28:1.4461E-3:36:10:10:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:6:6:0:17:35.29%:20:9.2021E-3:36:11:8:3:17 0/1:36:10:6:4:36:27.78%:33:4.7404E-4:36:26:23:3:36 0/0:33:6:5:1:22:27.27%:9:1.057E-2:38:16:11:5:23 0/1:32:8:5:3:31:25.81%:26:2.3332E-3:37:23:19:4:34 0/0:39:6:3:3:21:28.57%:9:1.0344E-2:36:15:12:3:22 0/1:37:16:12:4:31:51.61%:59:1.0995E-6:35:15:13:2:32 0/1:38:7:6:1:20:35%:23:4.158E-3:35:13:9:4:23 0/1:41:8:5:3:18:44.44%:28:1.4461E-3:38:10:6:4:20 0/1:39:11:6:5:21:52.38%:40:8.2399E-5:39:10:9:1:21 0/1:40:9:3:6:20:45%:32:6.1425E-4:36:11:9:2:23 0/1:33:12:9:3:26:46.15%:43:4.6796E-5:36:14:13:1:28 0/0:38:6:4:2:24:25%:11:1.0968E-2:36:18:15:3:24 0/0:36:5:5:0:11:45.45%:3:1.7544E-2:47:6:3:3:12 0/1:37:11:4:7:31:35.48%:37:1.6659E-4:35:20:18:2:33 0/1:37:9:5:4:28:32.14%:30:9.1169E-4:36:19:19:0:31 0/1:37:11:6:5:26:42.31%:38:1.2791E-4:37:15:12:3:27 0/1:38:8:8:0:13:61.54%:30:8.238E-4:41:5:5:0:13 0/1:32:11:9:2:25:44%:39:1.1933E-4:35:14:13:1:26 0/0:34:1:1:0:14:7.14%:17:5E-1:36:13:11:2:17 0/1:36:6:4:2:18:33.33%:20:9.5308E-3:36:12:10:2:18 0/1:38:12:5:7:25:48%:43:4.2836E-5:39:13:10:3:26 0/1:35:9:5:4:25:36%:30:8.1542E-4:37:16:12:4:26 0/1:34:12:10:2:26:46.15%:43:4.6796E-5:36:14:12:2:26 0/1:40:6:4:2:18:33.33%:20:9.5308E-3:38:12:9:3:19 0/1:36:15:10:5:29:51.72%:55:2.6068E-6:39:14:12:2:30 0/1:37:15:10:5:32:46.88%:54:3.5464E-6:36:17:15:2:34 0/1:37:10:5:5:18:55.56%:37:1.7215E-4:37:8:7:1:19 0/1:36:7:4:3:24:29.17%:23:4.7006E-3:36:17:13:4:24 0/1:41:7:7:0:20:35%:23:4.158E-3:37:13:11:2:22 0/0:37:4:1:3:12:33.33%:4:4.6584E-2:36:8:6:2:12 0/0:34:5:5:0:18:27.78%:8:2.2727E-2:36:13:9:4:18 0/1:39:15:6:9:38:39.47%:52:5.4463E-6:38:23:15:8:41 0/0:42:3:3:0:17:17.65%:14:1.1364E-1:35:14:10:4:17 0/1:39:11:9:2:30:36.67%:37:1.594E-4:35:19:16:3:31 0/0:45:3:2:1:15:20%:11:1.1207E-1:37:12:9:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:40:7:3:4:19:36.84%:23:3.9926E-3:37:12:9:3:22 0/0:35:4:4:0:24:16.67%:18:5.461E-2:40:20:16:4:25 0/0:33:3:2:1:13:23.08%:9:1.1E-1:35:10:6:4:14 0/1:39:8:4:4:32:25%:26:2.3764E-3:37:24:20:4:34 0/0:36:6:2:4:27:22.22%:16:1.1461E-2:37:21:17:4:28 0/1:33:7:4:3:18:38.89%:24:3.8123E-3:35:11:9:2:18 0/0:32:5:2:3:16:31.25%:6:2.1691E-2:36:11:9:2:16 0/0:36:3:2:1:17:17.65%:14:1.1364E-1:37:14:11:3:18 0/0:33:5:1:4:17:29.41%:8:2.2239E-2:35:12:7:5:17 0/0:34:4:1:3:14:28.57%:6:4.8889E-2:36:10:8:2:15 0/0:33:5:4:1:12:41.67%:3:1.8634E-2:40:7:6:1:12 0/1:39:8:4:4:28:28.57%:26:2.188E-3:38:20:17:3:30 0/1:41:9:8:1:25:36%:30:8.1542E-4:36:16:15:1:26 0/1:43:7:2:5:14:50%:25:2.8986E-3:36:7:5:2:15 0/0:36:5:1:4:17:29.41%:8:2.2239E-2:36:12:11:1:17 0/0:48:4:2:2:14:28.57%:6:4.8889E-2:35:10:9:1:15 0/0:35:6:1:5:24:25%:11:1.0968E-2:35:18:16:2:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:10:8:2:17:58.82%:38:1.4831E-4:37:7:7:0:17 0/1:40:8:4:4:13:61.54%:30:8.238E-4:36:5:5:0:13 0/1:34:11:6:5:22:50%:40:9.1981E-5:38:11:9:2:22 0/1:38:10:7:3:19:52.63%:37:1.9541E-4:37:9:9:0:20 0/1:35:8:5:3:33:24.24%:26:2.4173E-3:37:25:22:3:34 0/1:40:7:4:3:17:41.18%:24:3.6151E-3:36:10:6:4:17 0/1:39:14:10:4:39:35.9%:48:1.4735E-5:37:25:18:7:40 0/1:39:11:7:4:19:57.89%:42:6.2811E-5:37:8:7:1:20 0/0:34:5:5:0:13:38.46%:4:1.9565E-2:37:8:8:0:13 0/1:37:7:3:4:18:38.89%:24:3.8123E-3:36:11:10:1:19 0/1:35:10:7:3:20:50%:36:2.1796E-4:35:10:9:1:21 0/1:35:7:4:3:23:30.43%:23:4.5803E-3:36:16:14:2:23 0/1:34:8:4:4:23:34.78%:27:1.8791E-3:37:15:13:2:24 0/1:33:13:9:4:31:41.94%:46:2.4825E-5:37:18:16:2:33 0/1:35:7:5:2:17:41.18%:24:3.6151E-3:36:10:9:1:18 0/1:37:8:6:2:16:50%:29:1.2236E-3:33:8:7:1:16 0/1:36:7:5:2:12:58.33%:26:2.2883E-3:36:5:4:1:12 0/1:36:10:6:4:26:38.46%:34:3.3576E-4:36:16:10:6:27 0/1:36:10:7:3:30:33.33%:33:3.9851E-4:36:20:16:4:32 0/1:37:9:4:5:27:33.33%:30:8.8132E-4:36:18:16:2:27 0/1:36:13:10:3:30:43.33%:46:2.3178E-5:36:17:15:2:32 0/1:34:7:4:3:40:17.5%:22:5.8688E-3:36:33:29:4:41 0/1:35:12:7:5:36:33.33%:40:8.1472E-5:38:24:21:3:36 0/0:40:5:2:3:23:21.74%:14:2.4548E-2:36:18:17:1:27 0/0:36:4:3:1:10:40%:3:4.3344E-2:35:6:5:1:11 0/1:36:15:10:5:31:48.39%:54:3.2298E-6:36:16:11:5:31 0/0:35:6:2:4:22:27.27%:9:1.057E-2:36:16:16:0:22 0/1:35:10:5:5:27:37.04%:34:3.5253E-4:36:17:17:0:27 0/1:36:7:7:0:12:58.33%:26:2.2883E-3:37:5:4:1:12 0/0:33:6:5:1:20:30%:7:1.0098E-2:36:14:13:1:21 0/0:34:4:3:1:12:33.33%:4:4.6584E-2:34:8:6:2:12 0/1:41:12:4:8:24:50%:44:3.8815E-5:37:12:8:4:25 0/1:38:17:11:6:38:44.74%:61:7.5297E-7:36:21:19:2:39 0/0:40:4:3:1:17:23.53%:11:5.132E-2:35:13:12:1:18 0/1:39:9:4:5:20:45%:32:6.1425E-4:35:11:9:2:21 0/1:34:6:1:5:16:37.5%:20:8.837E-3:34:10:7:3:19 0/1:36:14:9:5:19:73.68%:59:1.2025E-6:33:5:3:2:19 0/1:34:10:8:2:18:55.56%:37:1.7215E-4:36:8:8:0:20 0/0:34:3:2:1:17:17.65%:14:1.1364E-1:35:14:13:1:17 0/1:39:6:5:1:14:42.86%:20:7.971E-3:37:8:8:0:14 0/0:40:5:1:4:18:27.78%:8:2.2727E-2:35:13:12:1:18 0/1:37:9:7:2:17:52.94%:33:4.6348E-4:36:8:5:3:17 0/1:36:7:3:4:16:43.75%:24:3.3988E-3:36:9:9:0:17 0/1:34:7:6:1:23:30.43%:23:4.5803E-3:35:16:13:3:23 0/1:38:9:5:4:18:50%:32:5.1645E-4:35:9:7:2:19 0/1:37:7:1:6:19:36.84%:23:3.9926E-3:35:12:8:4:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:7:4:3:20:35%:23:4.158E-3:37:13:12:1:20 0/1:32:10:7:3:23:43.48%:35:2.8066E-4:36:13:12:1:23 0/0:39:5:3:2:13:38.46%:4:1.9565E-2:36:8:5:3:13 0/1:40:6:5:1:19:31.58%:20:9.828E-3:40:13:12:1:21 0/1:39:11:7:4:32:34.38%:37:1.7351E-4:35:21:19:2:32 0/1:37:8:4:4:21:38.1%:27:1.7241E-3:36:13:11:2:22 0/1:36:6:0:6:13:46.15%:21:7.4534E-3:34:7:6:1:13 0/1:34:8:4:4:17:47.06%:28:1.3389E-3:36:9:7:2:17 0/1:37:8:4:4:23:34.78%:27:1.8791E-3:35:15:14:1:24 0/1:35:9:7:2:24:37.5%:31:7.7962E-4:36:15:14:1:24 0/0:36:5:4:1:16:31.25%:6:2.1691E-2:34:11:10:1:17 0/1:40:9:7:2:21:42.86%:31:6.592E-4:36:12:10:2:21 0/0:54:4:1:3:24:16.67%:18:5.461E-2:36:20:18:2:27 0/1:35:11:7:4:25:44%:39:1.1933E-4:36:14:13:1:26 0/0:34:3:2:1:10:30%:4:1.0526E-1:36:7:5:2:10 MTB_anc 1631412 . A G . PASS AC=70;AF=0.248;AN=282;ANN=G|synonymous_variant|LOW|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3216T>C|p.Thr1072Thr|3216/3990|3216/3990|1072/1329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631412A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631412A>G||||||;HOM=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:35:8:5:3:22:36.36%:27:1.8042E-3:34:14:12:2:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:40:11:9:2:28:39.29%:38:1.4422E-4:36:17:12:5:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:4:3:1:14:28.57%:6:4.8889E-2:36:10:9:1:14 0/0:37:3:2:1:12:25%:6:1.087E-1:38:9:8:1:13 0/0:35:6:5:1:22:27.27%:9:1.057E-2:35:16:12:4:22 0/1:39:7:5:2:18:38.89%:24:3.8123E-3:35:11:10:1:18 0/0:36:5:4:1:22:22.73%:12:2.4248E-2:35:17:15:2:22 0/1:41:9:5:4:23:39.13%:31:7.4174E-4:36:14:10:4:23 0/0:40:4:3:1:12:33.33%:4:4.6584E-2:36:8:7:1:12 0/1:33:9:5:4:28:32.14%:30:9.1169E-4:36:19:15:4:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:9:7:2:18:50%:32:5.1645E-4:36:9:8:1:19 0/0:35:4:3:1:17:23.53%:11:5.132E-2:35:13:11:2:17 0/0:35:5:4:1:15:33.33%:6:2.1073E-2:35:10:8:2:15 0/0:40:5:3:2:14:35.71%:4:2.037E-2:36:9:8:1:16 0/0:43:3:3:0:11:27.27%:7:1.0714E-1:35:8:5:3:11 0/1:33:6:5:1:11:54.55%:22:6.192E-3:35:5:3:2:12 0/0:35:4:2:2:10:40%:3:4.3344E-2:34:6:3:3:10 0/1:37:7:6:1:13:53.85%:25:2.6087E-3:36:6:5:1:13 0/1:35:9:4:5:27:33.33%:30:8.8132E-4:36:18:13:5:29 0/0:33:3:3:0:13:23.08%:9:1.1E-1:36:10:7:3:14 0/1:42:8:6:2:28:28.57%:26:2.188E-3:36:20:16:4:28 0/0:41:5:5:0:21:23.81%:12:2.3921E-2:36:16:11:5:23 0/0:33:3:3:0:20:15%:16:1.1538E-1:36:17:12:5:20 0/0:41:3:2:1:13:23.08%:9:1.1E-1:36:10:9:1:13 0/1:41:7:6:1:17:41.18%:24:3.6151E-3:37:10:9:1:17 0/1:37:9:6:3:23:39.13%:31:7.4174E-4:34:14:12:2:25 0/0:41:5:4:1:12:41.67%:3:1.8634E-2:36:7:5:2:15 0/1:34:9:7:2:26:34.62%:30:8.4928E-4:36:17:14:3:28 0/0:35:6:3:3:26:23.08%:13:1.1309E-2:37:20:19:1:28 0/1:44:6:2:4:15:40%:20:8.4291E-3:36:9:9:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:3:3:0:15:20%:11:1.1207E-1:36:12:10:2:15 0/0:40:5:4:1:30:16.67%:21:2.6093E-2:36:25:23:2:31 0/1:40:6:5:1:19:31.58%:20:9.828E-3:38:13:11:2:19 0/1:38:9:6:3:32:28.12%:29:1.0185E-3:35:23:19:4:33 0/0:38:5:3:2:20:25%:10:2.3562E-2:35:15:12:3:20 0/1:41:13:10:3:28:46.43%:47:1.9812E-5:35:15:13:2:30 0/1:34:6:6:0:16:37.5%:20:8.837E-3:35:10:9:1:17 0/1:40:7:5:2:15:46.67%:25:3.1609E-3:36:8:6:2:16 0/0:44:3:2:1:12:25%:6:1.087E-1:37:9:8:1:12 0/1:40:6:3:3:16:37.5%:20:8.837E-3:36:10:8:2:17 0/1:42:8:5:3:23:34.78%:27:1.8791E-3:34:15:14:1:25 0/0:39:4:3:1:18:22.22%:10:5.1948E-2:36:14:13:1:19 0/0:36:4:4:0:10:40%:3:4.3344E-2:41:6:4:2:11 0/0:39:6:3:3:26:23.08%:13:1.1309E-2:36:20:18:2:27 0/0:37:6:5:1:23:26.09%:11:1.0777E-2:35:17:17:0:25 0/1:38:9:5:4:24:37.5%:31:7.7962E-4:36:15:13:2:25 0/1:39:8:8:0:13:61.54%:30:8.238E-4:41:5:5:0:13 0/1:34:10:8:2:21:47.62%:36:2.3971E-4:35:11:11:0:22 0/0:38:1:1:0:14:7.14%:17:5E-1:35:13:12:1:14 0/0:40:4:3:1:15:26.67%:8:4.9808E-2:35:11:9:2:15 0/1:35:6:3:3:16:37.5%:20:8.837E-3:37:10:9:1:16 0/0:36:4:2:2:21:19.05%:15:5.3471E-2:36:17:13:4:21 0/1:38:7:6:1:18:38.89%:24:3.8123E-3:34:11:11:0:20 0/1:33:6:4:2:19:31.58%:20:9.828E-3:36:13:10:3:19 0/1:36:13:8:5:25:52%:48:1.4654E-5:37:12:10:2:26 0/1:42:9:7:2:27:33.33%:30:8.8132E-4:36:18:16:2:28 0/1:39:8:4:4:17:47.06%:28:1.3389E-3:35:9:8:1:17 0/0:37:3:1:2:20:15%:16:1.1538E-1:35:17:14:3:20 0/1:42:6:6:0:19:31.58%:20:9.828E-3:35:13:11:2:19 0/0:46:2:1:1:9:22.22%:7:2.3529E-1:35:7:6:1:9 0/0:33:5:5:0:18:27.78%:8:2.2727E-2:35:13:9:4:19 0/1:39:11:5:6:33:33.33%:37:1.8019E-4:38:22:15:7:35 0/0:60:1:1:0:14:7.14%:17:5E-1:37:13:10:3:14 0/1:40:11:9:2:29:37.93%:38:1.5195E-4:36:18:15:3:31 0/0:48:2:1:1:13:15.38%:13:2.4E-1:37:11:9:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:42:7:3:4:22:31.82%:23:4.4505E-3:36:15:13:2:22 0/0:41:4:4:0:23:17.39%:18:5.4264E-2:37:19:16:3:24 0/0:37:4:2:2:13:30.77%:6:4.7826E-2:36:9:6:3:13 0/1:39:7:4:3:30:23.33%:22:5.2713E-3:37:23:20:3:30 0/0:40:6:2:4:23:26.09%:11:1.0777E-2:35:17:14:3:25 0/0:36:5:3:2:16:31.25%:6:2.1691E-2:35:11:10:1:16 0/0:42:2:1:1:13:15.38%:13:2.4E-1:34:11:10:1:13 0/0:41:4:3:1:19:21.05%:13:5.251E-2:36:15:12:3:19 0/0:34:5:1:4:15:33.33%:6:2.1073E-2:35:10:7:3:16 0/0:38:2:0:2:10:20%:7:2.3684E-1:36:8:7:1:10 0/0:34:3:3:0:9:33.33%:4:1.0294E-1:40:6:5:1:9 0/0:34:5:2:3:21:23.81%:12:2.3921E-2:36:16:15:1:21 0/1:45:7:6:1:23:30.43%:23:4.5803E-3:36:16:15:1:24 0/1:42:7:2:5:14:50%:25:2.8986E-3:37:7:6:1:14 0/0:37:2:1:1:13:15.38%:13:2.4E-1:35:11:10:1:14 0/0:42:4:2:2:12:33.33%:4:4.6584E-2:36:8:7:1:13 0/0:37:4:1:3:21:19.05%:15:5.3471E-2:35:17:16:1:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:9:8:1:17:52.94%:33:4.6348E-4:37:8:8:0:17 0/1:38:7:4:3:12:58.33%:26:2.2883E-3:36:5:5:0:12 0/1:38:10:6:4:19:52.63%:37:1.9541E-4:37:9:8:1:19 0/1:39:8:5:3:19:42.11%:28:1.5455E-3:36:11:11:0:19 0/0:35:6:4:2:28:21.43%:16:1.1603E-2:37:22:19:3:29 0/1:40:7:4:3:17:41.18%:24:3.6151E-3:36:10:6:4:17 0/1:39:9:8:1:34:26.47%:29:1.0644E-3:36:25:19:6:34 0/1:42:9:6:3:18:50%:32:5.1645E-4:35:9:7:2:18 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:36:7:7:0:12 0/1:35:7:3:4:19:36.84%:23:3.9926E-3:35:12:11:1:19 0/1:32:8:6:2:17:47.06%:28:1.3389E-3:36:9:7:2:19 0/0:35:2:2:0:16:12.5%:15:2.4194E-1:34:14:12:2:17 0/0:41:4:2:2:20:20%:13:5.3015E-2:36:16:14:2:20 0/1:36:10:8:2:28:35.71%:34:3.6855E-4:36:18:16:2:29 0/0:35:5:5:0:17:29.41%:8:2.2239E-2:35:12:11:1:17 0/1:35:6:5:1:14:42.86%:20:7.971E-3:34:8:7:1:14 0/1:38:7:5:2:11:63.64%:27:1.935E-3:34:4:3:1:11 0/0:44:6:5:1:22:27.27%:9:1.0344E-2:36:15:9:6:22 0/1:36:10:8:2:30:33.33%:33:3.9851E-4:36:20:16:4:31 0/1:43:7:4:3:23:30.43%:23:4.5803E-3:36:16:16:0:24 0/1:37:8:6:2:24:33.33%:27:1.949E-3:36:16:14:2:24 0/0:37:6:2:4:35:17.14%:25:1.238E-2:35:29:26:3:38 0/1:34:7:6:1:30:23.33%:22:5.2713E-3:36:23:21:2:31 0/1:36:7:6:1:25:28%:23:4.8126E-3:36:18:17:1:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:33:10:7:3:26:38.46%:34:3.3576E-4:36:16:11:5:27 0/0:37:4:2:2:19:21.05%:13:5.251E-2:36:15:15:0:20 0/1:34:8:5:3:23:34.78%:27:1.8791E-3:36:15:15:0:25 0/1:40:7:7:0:13:53.85%:25:2.6087E-3:36:6:5:1:13 0/0:34:6:5:1:20:30%:7:1.0098E-2:36:14:12:2:21 0/0:36:2:2:0:10:20%:7:2.3684E-1:33:8:5:3:11 0/1:44:12:4:8:24:50%:44:3.8815E-5:35:12:8:4:24 0/1:37:14:8:6:34:41.18%:49:1.1295E-5:35:20:18:2:34 0/0:34:3:1:2:14:21.43%:9:1.1111E-1:36:11:11:0:15 0/0:40:5:2:3:17:29.41%:8:2.2239E-2:36:12:9:3:17 0/0:40:5:3:2:16:31.25%:6:2.1691E-2:36:11:8:3:17 0/1:37:9:7:2:13:69.23%:36:2.2883E-4:37:4:3:1:13 0/1:37:10:9:1:18:55.56%:37:1.7215E-4:34:8:8:0:20 0/0:35:2:1:1:15:13.33%:16:2.4138E-1:35:13:13:0:16 0/1:35:6:5:1:14:42.86%:20:7.971E-3:36:8:8:0:14 0/0:39:5:1:4:18:27.78%:8:2.2727E-2:36:13:11:2:19 0/0:41:4:4:0:12:33.33%:4:4.6584E-2:35:8:5:3:13 0/0:41:4:2:2:14:28.57%:6:4.8889E-2:34:10:10:0:14 0/0:34:4:4:0:18:22.22%:10:5.1948E-2:35:14:12:2:19 0/1:38:6:3:3:13:46.15%:21:7.4534E-3:36:7:5:2:15 0/0:36:4:1:3:16:25%:8:5.0612E-2:36:12:8:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:6:3:3:18:33.33%:20:9.5308E-3:36:12:11:1:18 0/1:35:8:6:2:20:40%:27:1.638E-3:36:12:11:1:21 0/0:37:2:1:1:11:18.18%:10:2.381E-1:35:9:6:3:11 0/0:45:3:1:2:14:21.43%:9:1.1111E-1:41:11:11:0:16 0/0:42:5:3:2:24:20.83%:14:2.4823E-2:35:19:18:1:26 0/1:36:8:4:4:23:34.78%:27:1.8791E-3:36:15:13:2:23 0/1:35:6:0:6:13:46.15%:21:7.4534E-3:36:7:6:1:14 0/1:34:7:4:3:16:43.75%:24:3.3988E-3:35:9:7:2:17 0/0:41:4:3:1:20:20%:13:5.3015E-2:36:16:15:1:20 0/0:36:6:5:1:21:28.57%:9:1.0344E-2:35:15:15:0:22 0/0:35:5:4:1:15:33.33%:6:2.1073E-2:35:10:10:0:15 0/1:46:7:6:1:20:35%:23:4.158E-3:37:13:10:3:21 0/0:54:4:1:3:27:14.81%:23:5.5494E-2:36:23:21:2:28 0/1:34:9:6:3:25:36%:30:8.1542E-4:35:16:15:1:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 MTB_anc 1631415 . C G . PASS AC=60;AF=0.217;AN=276;ANN=G|synonymous_variant|LOW|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3213G>C|p.Gly1071Gly|3213/3990|3213/3990|1071/1329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631415C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631415C>G||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:34:8:5:3:21:38.1%:27:1.7241E-3:36:13:11:2:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:7:5:2:25:28%:23:4.8126E-3:37:18:12:6:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:29:2:2:0:13:15.38%:13:2.4E-1:37:11:11:0:14 0/0:36:3:2:1:11:27.27%:7:1.0714E-1:37:8:7:1:11 0/0:35:5:4:1:21:23.81%:12:2.3921E-2:36:16:12:4:22 0/1:37:7:5:2:16:43.75%:24:3.3988E-3:37:9:9:0:16 0/0:35:4:3:1:21:19.05%:15:5.3471E-2:37:17:15:2:22 0/1:42:7:4:3:21:33.33%:23:4.3101E-3:37:14:10:4:23 0/0:39:3:2:1:11:27.27%:7:1.0714E-1:37:8:7:1:11 0/1:36:7:4:3:25:28%:23:4.8126E-3:37:18:14:4:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:34:6:5:1:16:37.5%:20:8.837E-3:37:10:9:1:17 0/0:33:3:2:1:16:18.75%:11:1.129E-1:37:13:11:2:16 0/0:33:5:4:1:15:33.33%:6:2.1073E-2:37:10:8:2:16 0/0:38:5:3:2:14:35.71%:4:2.037E-2:37:9:8:1:16 0/0:40:2:2:0:10:20%:7:2.3684E-1:37:8:5:3:11 0/1:33:6:5:1:12:50%:21:6.865E-3:35:6:4:2:12 0/0:36:3:2:1:10:30%:4:1.0526E-1:36:7:3:4:10 0/1:35:7:6:1:13:53.85%:26:2.2883E-3:38:5:4:1:14 0/1:31:7:3:4:26:26.92%:23:4.9169E-3:37:19:14:5:28 0/0:31:3:3:0:13:23.08%:9:1.1E-1:37:10:7:3:14 0/1:40:8:6:2:28:28.57%:26:2.188E-3:37:20:16:4:28 0/0:38:6:6:0:24:25%:11:1.0968E-2:36:18:13:5:24 0/0:34:3:3:0:20:15%:16:1.1538E-1:36:17:12:5:20 0/0:42:3:2:1:14:21.43%:9:1.1111E-1:37:11:9:2:14 0/1:40:6:5:1:17:35.29%:20:9.2021E-3:37:11:10:1:17 0/1:37:8:5:3:23:34.78%:27:1.8042E-3:37:14:13:1:23 0/1:38:6:5:1:16:37.5%:20:8.4291E-3:37:9:7:2:16 0/1:32:8:6:2:27:29.63%:26:2.1337E-3:36:19:15:4:29 0/0:36:4:1:3:22:18.18%:15:5.3885E-2:39:18:17:1:25 0/0:44:5:2:3:14:35.71%:4:2.037E-2:37:9:9:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:3:0:14:21.43%:9:1.1111E-1:36:11:9:2:15 0/0:37:5:4:1:31:16.13%:24:2.6257E-2:36:26:24:2:31 0/1:39:6:5:1:19:31.58%:20:9.828E-3:39:13:11:2:19 0/1:33:7:5:2:31:22.58%:22:5.3469E-3:36:24:20:4:31 0/0:39:5:3:2:20:25%:10:2.3562E-2:37:15:12:3:20 0/1:37:14:11:3:29:48.28%:51:7.6466E-6:36:15:13:2:30 0/0:29:3:3:0:12:25%:6:1.087E-1:35:9:9:0:13 0/1:40:6:4:2:14:42.86%:20:7.971E-3:37:8:6:2:14 0/0:42:3:2:1:12:25%:6:1.087E-1:38:9:8:1:12 0/0:42:5:2:3:15:33.33%:6:2.1073E-2:38:10:8:2:17 0/1:40:7:4:3:23:30.43%:23:4.5803E-3:36:16:15:1:23 0/0:41:3:2:1:18:16.67%:14:1.1429E-1:38:15:14:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:36:6:3:3:26:23.08%:13:1.1309E-2:37:20:18:2:27 0/0:34:6:5:1:26:23.08%:13:1.1309E-2:37:20:18:2:27 0/1:37:8:5:3:23:34.78%:27:1.8791E-3:37:15:13:2:23 0/1:33:7:7:0:12:58.33%:26:2.2883E-3:41:5:5:0:12 0/1:33:8:7:1:20:40%:27:1.638E-3:37:12:12:0:20 0/0:38:1:1:0:14:7.14%:17:5E-1:37:13:12:1:14 0/0:41:4:3:1:16:25%:8:5.0612E-2:34:12:10:2:16 0/1:36:6:3:3:15:40%:20:8.4291E-3:38:9:8:1:16 0/0:36:3:1:2:18:16.67%:14:1.1429E-1:37:15:13:2:19 0/1:35:7:6:1:19:36.84%:23:3.9926E-3:37:12:12:0:19 0/0:33:5:4:1:17:29.41%:8:2.2239E-2:38:12:10:2:17 0/1:36:13:8:5:26:50%:47:1.6379E-5:37:13:11:2:26 0/1:45:7:5:2:26:26.92%:23:4.9169E-3:37:19:17:2:27 0/1:40:7:4:3:15:46.67%:25:3.1609E-3:38:8:7:1:16 0/0:37:3:1:2:19:15.79%:17:1.1486E-1:37:16:14:2:19 0/0:41:4:4:0:17:23.53%:11:5.132E-2:37:13:11:2:18 0/0:44:1:0:1:7:14.29%:8:5E-1:36:6:5:1:7 0/0:35:4:4:0:20:20%:13:5.3015E-2:36:16:11:5:20 0/1:38:11:5:6:30:36.67%:37:1.594E-4:38:19:15:4:31 0/0:60:1:1:0:12:8.33%:14:5E-1:37:11:8:3:14 0/1:39:10:9:1:31:32.26%:33:4.1251E-4:36:21:19:2:31 0/0:28:1:1:0:12:8.33%:14:5E-1:38:11:9:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:39:6:3:3:22:27.27%:9:1.057E-2:39:16:13:3:23 0/0:40:4:4:0:23:17.39%:18:5.4264E-2:38:19:16:3:24 0/0:35:3:1:2:11:27.27%:7:1.0714E-1:38:8:6:2:12 0/1:40:7:4:3:29:24.14%:22:5.1909E-3:37:22:18:4:29 0/0:35:6:2:4:24:25%:11:1.0968E-2:36:18:16:2:24 0/0:35:4:2:2:14:28.57%:6:4.8889E-2:37:10:9:1:16 0/0:45:2:1:1:11:18.18%:10:2.381E-1:37:9:9:0:12 0/0:42:4:3:1:19:21.05%:13:5.251E-2:37:15:12:3:19 0/0:34:3:0:3:13:23.08%:9:1.1E-1:36:10:7:3:13 0/0:38:2:0:2:10:20%:7:2.3684E-1:37:8:7:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:35:5:2:3:22:22.73%:12:2.4248E-2:37:17:15:2:22 0/1:41:8:7:1:24:33.33%:27:1.949E-3:35:16:15:1:24 0/1:41:7:2:5:15:46.67%:25:3.1609E-3:36:8:7:1:15 0/0:37:2:1:1:14:14.29%:12:2.4074E-1:36:12:11:1:14 0/0:43:3:1:2:13:23.08%:9:1.1E-1:36:10:8:2:14 0/0:38:3:0:3:21:14.29%:19:1.1585E-1:36:18:16:2:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:33:8:7:1:16:50%:29:1.2236E-3:37:8:8:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:35:10:6:4:18:55.56%:37:1.7215E-4:38:8:7:1:18 0/1:37:8:5:3:18:44.44%:28:1.4461E-3:37:10:10:0:18 0/0:35:4:2:2:26:15.38%:20:5.5222E-2:37:22:19:3:27 0/1:40:7:4:3:16:43.75%:24:3.3988E-3:36:9:6:3:16 0/1:36:9:8:1:34:26.47%:29:1.0644E-3:37:25:20:5:34 0/1:41:9:6:3:18:50%:32:5.1645E-4:37:9:7:2:18 0/0:29:3:3:0:12:25%:6:1.087E-1:36:9:9:0:12 0/1:34:7:3:4:20:35%:23:4.158E-3:37:13:11:2:20 0/1:32:6:4:2:16:37.5%:20:8.837E-3:37:10:9:1:17 0/0:33:2:2:0:16:12.5%:15:2.4194E-1:37:14:12:2:16 0/0:33:4:2:2:19:21.05%:13:5.251E-2:37:15:13:2:19 0/1:33:10:8:2:26:38.46%:34:3.3576E-4:37:16:14:2:28 0/0:32:3:3:0:14:21.43%:9:1.1111E-1:37:11:10:1:15 0/1:35:6:5:1:13:46.15%:21:7.4534E-3:35:7:7:0:13 0/1:37:7:5:2:11:63.64%:27:1.935E-3:36:4:3:1:11 0/1:43:7:6:1:22:31.82%:23:4.4505E-3:37:15:9:6:22 0/1:33:9:7:2:29:31.03%:30:9.4048E-4:37:20:16:4:31 0/1:40:7:4:3:24:29.17%:23:4.7006E-3:37:17:16:1:25 0/1:34:7:5:2:23:30.43%:23:4.5803E-3:37:16:14:2:23 0/0:33:6:2:4:36:16.67%:25:1.2467E-2:36:30:27:3:37 0/0:31:5:4:1:30:16.67%:21:2.6093E-2:37:25:23:2:31 0/0:33:6:5:1:22:27.27%:9:1.057E-2:37:16:15:1:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:34:8:5:3:25:32%:26:2.0146E-3:37:17:12:5:25 0/0:35:4:2:2:20:20%:13:5.3015E-2:37:16:16:0:20 0/1:34:8:5:3:24:33.33%:27:1.949E-3:37:16:16:0:25 0/1:39:6:6:0:12:50%:21:6.865E-3:37:6:5:1:13 0/0:33:5:5:0:20:25%:10:2.3562E-2:37:15:13:2:20 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:33:7:4:3:11 0/1:44:11:3:8:22:50%:40:9.1981E-5:36:11:8:3:22 0/1:37:13:7:6:32:40.62%:45:2.6443E-5:36:19:17:2:33 0/0:37:1:1:0:14:7.14%:17:5E-1:36:13:13:0:14 0/0:39:4:2:2:17:23.53%:11:5.132E-2:38:13:10:3:17 0/0:40:4:3:1:16:25%:8:5.0612E-2:35:12:9:3:16 0/1:37:8:6:2:12:66.67%:31:6.7304E-4:38:4:3:1:13 0/1:36:8:7:1:19:42.11%:28:1.5455E-3:37:11:10:1:19 0/0:33:1:0:1:15:6.67%:21:5E-1:36:14:14:0:16 0/1:33:6:5:1:14:42.86%:20:7.971E-3:37:8:8:0:14 0/0:38:5:1:4:19:26.32%:10:2.3166E-2:37:14:12:2:19 0/0:37:5:5:0:12:41.67%:3:1.8634E-2:36:7:5:2:12 0/0:38:3:1:2:13:23.08%:9:1.1E-1:36:10:10:0:13 0/0:33:3:3:0:16:18.75%:11:1.129E-1:37:13:12:1:18 0/0:38:5:2:3:14:35.71%:4:2.037E-2:36:9:7:2:15 0/0:35:4:1:3:14:28.57%:6:4.8889E-2:38:10:7:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:5:3:2:17:29.41%:8:2.2239E-2:38:12:11:1:18 0/1:32:6:4:2:19:31.58%:20:9.828E-3:37:13:12:1:21 0/0:37:2:1:1:8:25%:5:2.3333E-1:38:6:5:1:9 0/0:45:3:1:2:13:23.08%:9:1.1E-1:38:10:10:0:14 0/0:36:6:4:2:26:23.08%:13:1.1309E-2:36:20:19:1:26 0/1:35:8:4:4:23:34.78%:27:1.8791E-3:37:15:13:2:23 0/0:37:5:0:5:13:38.46%:4:1.9565E-2:37:8:7:1:13 0/1:33:6:3:3:16:37.5%:20:8.837E-3:35:10:9:1:16 0/0:40:4:3:1:21:19.05%:15:5.3471E-2:37:17:16:1:21 0/0:31:5:4:1:21:23.81%:12:2.3921E-2:36:16:16:0:21 0/0:35:4:3:1:13:30.77%:6:4.7826E-2:37:9:9:0:13 0/1:43:8:7:1:21:38.1%:27:1.7241E-3:39:13:10:3:21 0/0:48:5:2:3:27:18.52%:19:2.5527E-2:37:22:20:2:28 0/1:34:9:6:3:25:36%:30:8.1542E-4:36:16:15:1:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 MTB_anc 1631422 . A G . PASS AC=41;AF=0.150;AN=274;ANN=G|missense_variant|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3206T>C|p.Ile1069Thr|3206/3990|3206/3990|1069/1329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631422A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631422A>G||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:7:4:3:21:33.33%:23:4.3101E-3:34:14:13:1:23 0/0:49:2:1:1:8:25%:5:2.3333E-1:36:6:5:1:8 0/1:38:7:5:2:26:26.92%:23:4.9169E-3:35:19:12:7:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:31:2:2:0:15:13.33%:16:2.4138E-1:34:13:12:1:15 0/0:37:3:2:1:9:33.33%:4:1.0294E-1:35:6:6:0:10 0/0:34:5:4:1:19:26.32%:10:2.3166E-2:35:14:10:4:20 0/1:37:7:5:2:16:43.75%:24:3.3988E-3:34:9:9:0:17 0/0:36:5:4:1:20:25%:10:2.3562E-2:35:15:14:1:21 0/1:39:6:4:2:19:31.58%:20:9.828E-3:34:13:11:2:21 0/0:38:3:2:1:11:27.27%:7:1.0714E-1:35:8:7:1:11 0/0:34:6:3:3:22:27.27%:9:1.057E-2:36:16:13:3:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:5:1:16:37.5%:20:8.837E-3:34:10:9:1:16 0/0:32:3:2:1:16:18.75%:11:1.129E-1:34:13:11:2:16 0/0:36:3:2:1:14:21.43%:9:1.1111E-1:35:11:9:2:15 0/0:40:4:2:2:12:33.33%:4:4.6584E-2:37:8:8:0:14 0/0:40:2:2:0:8:25%:5:2.3333E-1:37:6:4:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:37:3:2:1:10:30%:4:1.0526E-1:35:7:3:4:10 0/0:37:5:4:1:13:38.46%:4:1.9565E-2:34:8:7:1:14 0/1:38:7:3:4:25:28%:23:4.8126E-3:36:18:14:4:26 0/0:37:3:3:0:11:27.27%:7:1.0714E-1:37:8:5:3:13 0/0:40:6:5:1:23:26.09%:11:1.0777E-2:37:17:14:3:25 0/0:37:5:5:0:19:26.32%:10:2.3166E-2:35:14:10:4:21 0/0:35:2:2:0:13:15.38%:13:2.4E-1:36:11:8:3:15 0/0:39:3:2:1:12:25%:6:1.087E-1:35:9:8:1:13 0/0:40:5:5:0:15:33.33%:6:2.1073E-2:36:10:9:1:16 0/0:32:4:3:1:16:25%:8:5.0612E-2:36:12:11:1:19 0/0:37:4:3:1:12:33.33%:4:4.6584E-2:36:8:7:1:14 0/1:32:8:6:2:21:38.1%:27:1.7241E-3:36:13:12:1:25 0/0:37:4:2:2:20:20%:13:5.3015E-2:36:16:16:0:21 0/0:45:5:2:3:14:35.71%:4:2.037E-2:35:9:9:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:3:3:0:12:25%:6:1.087E-1:37:9:9:0:12 0/0:40:3:2:1:26:11.54%:25:1.1765E-1:34:23:21:2:29 0/1:38:6:5:1:17:35.29%:20:9.2021E-3:37:11:11:0:17 0/1:39:7:5:2:28:25%:22:5.1054E-3:35:21:19:2:28 0/0:38:4:3:1:16:25%:8:5.0612E-2:35:12:9:3:17 0/1:39:13:10:3:26:50%:47:1.6379E-5:35:13:11:2:29 0/0:29:2:2:0:9:22.22%:7:2.3529E-1:35:7:7:0:12 0/1:40:6:4:2:14:42.86%:20:7.971E-3:33:8:6:2:15 0/0:44:3:2:1:13:23.08%:9:1.1E-1:35:10:9:1:13 0/0:49:3:2:1:12:25%:6:1.087E-1:36:9:7:2:13 0/1:42:7:4:3:22:31.82%:23:4.4505E-3:34:15:15:0:22 0/0:30:2:2:0:15:13.33%:16:2.4138E-1:37:13:12:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:3:3:0:22:13.64%:19:1.1628E-1:35:19:18:1:23 0/0:36:5:4:1:23:21.74%:14:2.4548E-2:35:18:16:2:26 0/1:38:8:5:3:20:40%:27:1.638E-3:37:12:11:1:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:33:7:6:1:17:41.18%:24:3.6151E-3:35:10:10:0:20 0/0:38:1:1:0:12:8.33%:14:5E-1:35:11:11:0:14 0/0:40:3:2:1:11:27.27%:7:1.0714E-1:34:8:7:1:12 0/0:38:3:1:2:13:23.08%:9:1.1E-1:35:10:9:1:14 0/0:36:3:1:2:18:16.67%:14:1.1429E-1:36:15:13:2:19 0/1:34:6:5:1:16:37.5%:20:8.837E-3:36:10:10:0:18 0/0:36:3:3:0:13:23.08%:9:1.1E-1:34:10:9:1:14 0/1:37:10:6:4:22:45.45%:35:2.6061E-4:36:12:11:1:22 0/1:42:8:6:2:23:34.78%:27:1.8791E-3:35:15:13:2:26 0/1:40:6:4:2:12:50%:21:6.865E-3:40:6:5:1:14 0/0:34:3:1:2:15:20%:11:1.1207E-1:36:12:10:2:17 0/0:40:4:4:0:15:26.67%:8:4.9808E-2:36:11:10:1:17 0/0:60:1:0:1:7:14.29%:8:5E-1:40:6:5:1:7 0/0:33:4:4:0:20:20%:13:5.3015E-2:35:16:11:5:20 0/1:37:11:5:6:27:40.74%:38:1.362E-4:36:16:14:2:28 0/0:60:1:1:0:13:7.69%:18:5E-1:36:12:9:3:13 0/1:39:10:9:1:28:35.71%:34:3.6855E-4:35:18:17:1:29 0/0:37:1:1:0:12:8.33%:14:5E-1:35:11:9:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:38:3:0:3:19:15.79%:17:1.1486E-1:38:16:13:3:20 0/0:40:4:4:0:18:22.22%:10:5.1948E-2:35:14:13:1:20 0/0:37:4:2:2:12:33.33%:4:4.6584E-2:37:8:6:2:12 0/1:40:7:4:3:28:25%:22:5.1054E-3:36:21:17:4:29 0/1:34:6:2:4:19:31.58%:20:9.828E-3:34:13:12:1:22 0/0:34:5:3:2:16:31.25%:6:2.1691E-2:36:11:10:1:16 0/0:46:2:1:1:12:16.67%:10:2.3913E-1:35:10:9:1:13 0/0:44:3:3:0:18:16.67%:14:1.1429E-1:36:15:12:3:18 0/0:35:3:0:3:10:30%:4:1.0526E-1:36:7:5:2:12 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:34:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:34:5:2:3:22:22.73%:12:2.4248E-2:35:17:15:2:22 0/1:46:8:7:1:25:32%:26:2.0146E-3:35:17:16:1:25 0/0:46:5:2:3:12:41.67%:3:1.8634E-2:35:7:7:0:12 0/0:37:2:1:1:11:18.18%:10:2.381E-1:33:9:9:0:12 0/0:48:2:1:1:12:16.67%:10:2.3913E-1:36:10:8:2:12 0/0:37:4:1:3:22:18.18%:15:5.3885E-2:34:18:17:1:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:6:1:15:46.67%:25:3.1609E-3:36:8:8:0:16 0/0:39:5:3:2:11:45.45%:3:1.7544E-2:37:6:6:0:12 0/1:37:9:6:3:18:50%:33:4.6348E-4:37:8:7:1:19 0/1:38:8:5:3:18:44.44%:28:1.4461E-3:36:10:10:0:18 0/0:33:3:2:1:24:12.5%:22:1.1702E-1:36:21:19:2:24 0/1:40:7:4:3:16:43.75%:24:3.3988E-3:36:9:6:3:16 0/1:37:9:8:1:33:27.27%:29:1.042E-3:35:24:20:4:33 0/1:39:9:6:3:17:52.94%:33:4.6348E-4:36:8:7:1:17 0/0:32:3:3:0:11:27.27%:7:1.0714E-1:35:8:8:0:12 0/0:36:5:3:2:16:31.25%:6:2.1691E-2:36:11:9:2:18 0/0:31:3:2:1:12:25%:6:1.087E-1:36:9:8:1:14 0/0:37:1:1:0:14:7.14%:17:5E-1:36:13:11:2:15 0/0:41:3:2:1:17:17.65%:14:1.1364E-1:37:14:13:1:18 0/1:33:9:7:2:24:37.5%:31:7.7962E-4:36:15:14:1:27 0/0:31:3:3:0:14:21.43%:9:1.1111E-1:36:11:10:1:14 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:34:6:6:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:50:4:3:1:15:26.67%:8:4.9808E-2:35:11:7:4:17 0/1:35:7:6:1:26:26.92%:23:4.9169E-3:35:19:15:4:28 0/0:40:6:4:2:23:26.09%:11:1.0777E-2:37:17:15:2:23 0/0:36:5:3:2:22:22.73%:12:2.4248E-2:35:17:15:2:23 0/0:35:6:2:4:33:18.18%:23:1.219E-2:35:27:26:1:35 0/0:34:6:5:1:30:20%:18:1.186E-2:35:24:23:1:30 0/0:32:6:5:1:21:28.57%:9:1.0344E-2:33:15:14:1:23 0/0:33:5:3:2:12:41.67%:3:1.8634E-2:36:7:6:1:12 0/0:33:6:3:3:21:28.57%:9:1.0344E-2:35:15:10:5:23 0/0:37:4:2:2:20:20%:13:5.3015E-2:36:16:16:0:20 0/1:34:6:4:2:19:31.58%:20:9.828E-3:35:13:13:0:22 0/0:36:5:5:0:13:38.46%:4:1.9565E-2:35:8:7:1:15 0/0:36:4:4:0:19:21.05%:13:5.251E-2:35:15:13:2:19 0/0:37:2:2:0:8:25%:5:2.3333E-1:34:6:3:3:11 0/1:48:8:1:7:18:44.44%:28:1.4461E-3:36:10:8:2:20 0/1:38:12:7:5:31:38.71%:41:6.5329E-5:35:19:16:3:32 0/0:37:1:1:0:12:8.33%:14:5E-1:33:11:11:0:13 0/0:41:3:1:2:15:20%:11:1.1207E-1:35:12:9:3:17 0/0:39:4:3:1:12:33.33%:4:4.6584E-2:35:8:8:0:12 0/1:39:6:5:1:10:60%:22:5.418E-3:37:4:3:1:11 0/1:36:8:7:1:17:47.06%:28:1.3389E-3:36:9:8:1:19 0/0:37:1:1:0:13:7.69%:18:5E-1:35:12:12:0:15 0/1:35:6:5:1:13:46.15%:21:7.4534E-3:37:7:7:0:13 0/0:45:2:0:2:16:12.5%:15:2.4194E-1:35:14:12:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:36:3:1:2:12:25%:6:1.087E-1:34:9:9:0:13 0/0:35:3:3:0:13:23.08%:9:1.1E-1:34:10:10:0:15 0/0:36:5:3:2:11:45.45%:3:1.7544E-2:35:6:4:2:14 0/0:36:4:1:3:15:26.67%:8:4.9808E-2:36:11:7:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:6:3:3:19:31.58%:20:9.828E-3:36:13:12:1:19 0/1:31:6:5:1:18:33.33%:20:9.5308E-3:35:12:11:1:19 0/0:37:2:1:1:8:25%:5:2.3333E-1:37:6:5:1:9 0/0:44:3:1:2:10:30%:4:1.0526E-1:35:7:7:0:12 0/0:40:5:3:2:20:25%:10:2.3562E-2:34:15:14:1:25 0/0:39:6:3:3:21:28.57%:9:1.0344E-2:34:15:13:2:21 0/0:37:5:0:5:12:41.67%:3:1.8634E-2:35:7:6:1:13 0/0:36:4:2:2:13:30.77%:6:4.7826E-2:35:9:7:2:14 0/0:38:4:3:1:19:21.05%:13:5.251E-2:36:15:14:1:21 0/0:36:4:3:1:18:22.22%:10:5.1948E-2:34:14:14:0:20 0/0:37:3:2:1:10:30%:4:1.0526E-1:34:7:7:0:10 0/1:42:7:6:1:20:35%:23:4.158E-3:38:13:10:3:20 0/0:60:4:1:3:25:16%:21:5.4928E-2:35:21:19:2:27 0/1:37:9:6:3:22:40.91%:31:7.0165E-4:35:13:13:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 MTB_anc 1631425 . C T . PASS AC=34;AF=0.122;AN=278;ANN=T|missense_variant|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3203G>A|p.Gly1068Asp|3203/3990|3203/3990|1068/1329||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631425C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631425C>T||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:7:4:3:23:30.43%:23:4.5803E-3:33:16:15:1:23 0/0:49:2:1:1:8:25%:5:2.3333E-1:37:6:5:1:8 0/1:40:7:5:2:26:26.92%:23:4.9169E-3:35:19:12:7:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:30:2:2:0:14:14.29%:12:2.4074E-1:35:12:12:0:15 0/0:35:3:2:1:10:30%:4:1.0526E-1:34:7:7:0:10 0/0:34:4:3:1:19:21.05%:13:5.251E-2:35:15:11:4:20 0/1:40:6:4:2:16:37.5%:20:8.837E-3:34:10:10:0:17 0/0:35:5:4:1:21:23.81%:12:2.3921E-2:35:16:15:1:21 0/1:39:6:4:2:19:31.58%:20:9.828E-3:36:13:11:2:21 0/0:38:3:2:1:11:27.27%:7:1.0714E-1:37:8:7:1:11 0/0:35:5:3:2:23:21.74%:14:2.4548E-2:36:18:15:3:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:5:4:1:14:35.71%:4:2.037E-2:36:9:8:1:15 0/0:31:2:1:1:15:13.33%:16:2.4138E-1:36:13:11:2:15 0/0:33:4:3:1:13:30.77%:6:4.7826E-2:35:9:7:2:14 0/0:40:5:3:2:14:35.71%:4:2.037E-2:37:9:9:0:14 0/0:48:2:2:0:9:22.22%:7:2.3529E-1:37:7:5:2:9 0/0:37:2:2:0:8:25%:5:2.3333E-1:36:6:4:2:9 0/0:33:2:1:1:9:22.22%:7:2.3529E-1:36:7:3:4:10 0/1:34:6:5:1:14:42.86%:20:7.971E-3:36:8:7:1:14 0/0:39:6:2:4:24:25%:11:1.0968E-2:36:18:14:4:25 0/0:31:3:3:0:12:25%:6:1.087E-1:36:9:6:3:12 0/0:44:5:4:1:24:20.83%:14:2.4823E-2:35:19:16:3:24 0/0:41:5:5:0:21:23.81%:12:2.3921E-2:35:16:12:4:21 0/0:34:2:2:0:14:14.29%:12:2.4074E-1:36:12:8:4:16 0/0:47:2:1:1:12:16.67%:10:2.3913E-1:36:10:9:1:13 0/0:44:3:3:0:14:21.43%:9:1.1111E-1:36:11:10:1:15 0/0:33:3:2:1:17:17.65%:14:1.1364E-1:36:14:13:1:18 0/0:32:4:3:1:14:28.57%:6:4.8889E-2:35:10:8:2:14 0/0:33:6:5:1:23:26.09%:11:1.0777E-2:36:17:15:2:24 0/0:35:4:2:2:20:20%:13:5.3015E-2:36:16:16:0:21 0/0:41:4:2:2:13:30.77%:6:4.7826E-2:34:9:9:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:3:3:0:12:25%:6:1.087E-1:37:9:9:0:12 0/0:40:4:3:1:28:14.29%:23:5.5746E-2:37:24:22:2:28 0/1:39:6:5:1:16:37.5%:20:8.837E-3:37:10:10:0:17 0/1:37:7:5:2:27:25.93%:22:5.0143E-3:35:20:18:2:27 0/0:41:4:3:1:17:23.53%:11:5.132E-2:36:13:10:3:17 0/1:40:12:9:3:28:42.86%:42:5.4482E-5:35:16:14:2:29 0/0:27:3:3:0:13:23.08%:9:1.1E-1:36:10:9:1:13 0/1:40:6:4:2:14:42.86%:20:7.971E-3:35:8:7:1:15 0/0:38:2:1:1:12:16.67%:10:2.3913E-1:36:10:9:1:13 0/0:47:3:2:1:14:21.43%:9:1.1111E-1:36:11:9:2:14 0/0:46:5:3:2:21:23.81%:12:2.3921E-2:35:16:16:0:22 0/0:37:1:1:0:16:6.25%:21:5E-1:36:15:13:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:3:0:20:15%:16:1.1538E-1:36:17:16:1:20 0/0:41:4:3:1:24:16.67%:18:5.461E-2:36:20:18:2:25 0/1:38:8:5:3:21:38.1%:27:1.7241E-3:36:13:12:1:21 0/1:41:6:6:0:10:60%:22:5.418E-3:37:4:4:0:10 0/1:33:7:6:1:20:35%:23:4.158E-3:35:13:12:1:21 0/0:34:1:1:0:14:7.14%:17:5E-1:36:13:13:0:14 0/0:43:3:2:1:11:27.27%:7:1.0714E-1:36:8:7:1:11 0/0:38:2:0:2:14:14.29%:12:2.4074E-1:35:12:11:1:15 0/0:36:3:1:2:17:17.65%:14:1.1364E-1:36:14:12:2:19 0/0:34:5:4:1:16:31.25%:6:2.1691E-2:35:11:11:0:18 0/0:34:3:3:0:14:21.43%:9:1.1111E-1:35:11:10:1:14 0/1:38:7:3:4:19:36.84%:23:3.9926E-3:37:12:11:1:22 0/1:38:8:6:2:26:30.77%:26:2.076E-3:35:18:16:2:26 0/1:40:6:4:2:14:42.86%:20:7.971E-3:37:8:7:1:14 0/0:37:3:1:2:17:17.65%:14:1.1364E-1:35:14:12:2:17 0/0:41:4:4:0:16:25%:8:5.0612E-2:36:12:11:1:17 0/0:60:1:0:1:7:14.29%:8:5E-1:39:6:5:1:7 0/0:32:4:4:0:20:20%:13:5.3015E-2:36:16:11:5:20 0/1:39:10:5:5:27:37.04%:34:3.5253E-4:36:17:15:2:27 0/0:60:1:1:0:13:7.69%:18:5E-1:36:12:9:3:13 0/1:38:9:9:0:28:32.14%:30:9.1169E-4:35:19:18:1:28 0/0:35:1:1:0:12:8.33%:14:5E-1:37:11:9:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:3:0:3:19:15.79%:17:1.1486E-1:38:16:13:3:19 0/0:44:3:3:0:19:15.79%:17:1.1486E-1:36:16:15:1:20 0/0:32:4:2:2:12:33.33%:4:4.6584E-2:37:8:6:2:12 0/1:39:7:4:3:30:23.33%:22:5.2713E-3:36:23:18:5:30 0/0:35:4:1:3:20:20%:13:5.3015E-2:35:16:15:1:21 0/0:32:2:2:0:13:15.38%:13:2.4E-1:36:11:10:1:14 0/0:42:2:1:1:13:15.38%:13:2.4E-1:35:11:10:1:13 0/0:45:3:3:0:18:16.67%:14:1.1429E-1:37:15:12:3:18 0/0:38:1:0:1:10:10%:11:5E-1:37:9:7:2:10 0/0:36:2:0:2:9:22.22%:7:2.3529E-1:35:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:36:4:2:2:21:19.05%:15:5.3471E-2:36:17:15:2:21 0/1:45:7:6:1:24:29.17%:23:4.7006E-3:35:17:16:1:25 0/0:46:5:2:3:13:38.46%:4:1.9565E-2:36:8:8:0:13 0/0:35:2:1:1:12:16.67%:10:2.3913E-1:34:10:10:0:12 0/0:49:2:1:1:11:18.18%:10:2.381E-1:36:9:7:2:11 0/0:33:4:1:3:21:19.05%:15:5.3471E-2:36:17:16:1:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:33:7:6:1:15:46.67%:25:3.1609E-3:37:8:8:0:15 0/0:37:5:3:2:12:41.67%:3:1.8634E-2:36:7:7:0:12 0/1:37:9:6:3:18:50%:32:5.1645E-4:36:9:7:2:18 0/1:38:7:5:2:17:41.18%:24:3.6151E-3:37:10:10:0:17 0/0:34:3:2:1:24:12.5%:22:1.1702E-1:36:21:19:2:24 0/1:40:7:4:3:16:43.75%:24:3.3988E-3:36:9:6:3:16 0/1:37:9:8:1:33:27.27%:29:1.042E-3:36:24:20:4:33 0/1:41:8:5:3:16:50%:29:1.2236E-3:35:8:7:1:17 0/0:31:3:3:0:12:25%:6:1.087E-1:35:9:9:0:12 0/0:34:4:2:2:17:23.53%:11:5.132E-2:36:13:11:2:18 0/0:31:2:1:1:12:16.67%:10:2.3913E-1:36:10:9:1:14 0/0:35:1:1:0:16:6.25%:21:5E-1:36:15:12:3:16 0/0:43:3:2:1:18:16.67%:14:1.1429E-1:36:15:14:1:18 0/1:35:7:5:2:23:30.43%:23:4.5803E-3:37:16:15:1:24 0/0:31:3:3:0:14:21.43%:9:1.1111E-1:36:11:10:1:14 0/0:36:3:3:0:10:30%:4:1.0526E-1:34:7:7:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:52:4:3:1:17:23.53%:11:5.132E-2:36:13:9:4:17 0/0:38:6:5:1:26:23.08%:13:1.1309E-2:36:20:16:4:27 0/0:40:6:4:2:22:27.27%:9:1.057E-2:36:16:14:2:23 0/0:37:5:4:1:22:22.73%:12:2.4248E-2:36:17:15:2:23 0/0:36:4:2:2:32:12.5%:29:5.6596E-2:37:28:27:1:32 0/0:33:5:4:1:30:16.67%:21:2.6093E-2:35:25:24:1:31 0/0:34:6:5:1:24:25%:11:1.0968E-2:35:18:17:1:24 0/0:33:5:3:2:12:41.67%:3:1.8634E-2:37:7:6:1:12 0/0:30:4:3:1:20:20%:13:5.3015E-2:36:16:11:5:21 0/0:32:4:2:2:20:20%:13:5.3015E-2:36:16:16:0:20 0/0:34:6:4:2:21:28.57%:9:1.0344E-2:35:15:15:0:22 0/1:36:6:6:0:14:42.86%:20:7.971E-3:36:8:7:1:14 0/0:33:4:4:0:19:21.05%:13:5.251E-2:35:15:13:2:19 0/0:35:1:1:0:9:11.11%:11:5E-1:35:8:5:3:10 0/1:46:9:2:7:20:45%:32:6.1425E-4:35:11:9:2:20 0/1:36:11:7:4:31:35.48%:37:1.6659E-4:35:20:17:3:31 0/0:37:1:1:0:12:8.33%:14:5E-1:35:11:11:0:13 0/0:42:4:2:2:17:23.53%:11:5.132E-2:36:13:10:3:18 0/0:38:3:2:1:11:27.27%:7:1.0714E-1:36:8:8:0:11 0/1:39:6:5:1:11:54.55%:22:6.192E-3:36:5:4:1:11 0/1:39:8:7:1:19:42.11%:28:1.5455E-3:33:11:10:1:19 0/0:37:1:1:0:14:7.14%:17:5E-1:35:13:13:0:15 0/1:32:6:5:1:13:46.15%:21:7.4534E-3:37:7:7:0:13 0/0:40:3:1:2:18:16.67%:14:1.1429E-1:36:15:13:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:35:3:1:2:13:23.08%:9:1.1E-1:36:10:10:0:13 0/0:35:3:3:0:15:20%:11:1.1207E-1:34:12:12:0:15 0/0:36:4:2:2:12:33.33%:4:4.6584E-2:35:8:6:2:14 0/0:34:3:1:2:14:21.43%:9:1.1111E-1:36:11:7:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:5:3:2:19:26.32%:10:2.3166E-2:36:14:13:1:19 0/0:33:5:4:1:18:27.78%:8:2.2727E-2:36:13:12:1:18 0/0:34:2:1:1:9:22.22%:7:2.3529E-1:37:7:6:1:9 0/0:40:3:1:2:11:27.27%:7:1.0714E-1:35:8:8:0:11 0/0:38:5:3:2:21:23.81%:12:2.3921E-2:35:16:15:1:23 0/1:39:6:3:3:19:31.58%:20:9.828E-3:37:13:11:2:19 0/0:37:4:0:4:12:33.33%:4:4.6584E-2:36:8:7:1:12 0/0:37:3:2:1:12:25%:6:1.087E-1:35:9:7:2:13 0/0:40:4:3:1:19:21.05%:13:5.251E-2:36:15:14:1:21 0/0:33:4:3:1:20:20%:13:5.3015E-2:36:16:16:0:20 0/0:36:3:2:1:9:33.33%:4:1.0294E-1:37:6:6:0:9 0/1:41:7:6:1:19:36.84%:23:3.9926E-3:38:12:9:3:19 0/0:60:4:1:3:25:16%:21:5.4928E-2:36:21:19:2:25 0/0:39:5:5:0:19:26.32%:10:2.3166E-2:36:14:14:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 MTB_anc 1631426 . C T . PASS AC=36;AF=0.129;AN=278;ANN=T|missense_variant|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3202G>A|p.Gly1068Ser|3202/3990|3202/3990|1068/1329||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631426C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631426C>T||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:7:4:3:22:31.82%:23:4.4505E-3:36:15:14:1:23 0/0:47:2:1:1:8:25%:5:2.3333E-1:37:6:5:1:8 0/1:40:7:5:2:26:26.92%:23:4.9169E-3:35:19:13:6:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:2:2:0:15:13.33%:16:2.4138E-1:36:13:12:1:15 0/0:35:3:2:1:10:30%:4:1.0526E-1:36:7:7:0:10 0/0:33:5:4:1:21:23.81%:12:2.3921E-2:36:16:12:4:21 0/1:33:7:5:2:17:41.18%:24:3.6151E-3:36:10:10:0:17 0/0:37:5:4:1:20:25%:10:2.3562E-2:37:15:15:0:21 0/1:40:7:5:2:20:35%:23:4.158E-3:36:13:11:2:21 0/0:44:3:2:1:11:27.27%:7:1.0714E-1:38:8:7:1:11 0/1:33:7:4:3:26:26.92%:23:4.9169E-3:37:19:16:3:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:6:5:1:15:40%:20:8.4291E-3:37:9:8:1:15 0/0:38:1:0:1:14:7.14%:17:5E-1:38:13:11:2:15 0/0:33:4:3:1:14:28.57%:6:4.8889E-2:37:10:8:2:14 0/0:40:5:3:2:14:35.71%:4:2.037E-2:38:9:9:0:14 0/0:48:2:2:0:9:22.22%:7:2.3529E-1:38:7:5:2:9 0/0:34:3:3:0:9:33.33%:4:1.0294E-1:37:6:4:2:9 0/0:34:3:2:1:10:30%:4:1.0526E-1:37:7:3:4:10 0/1:35:6:5:1:14:42.86%:20:7.971E-3:36:8:7:1:14 0/1:36:7:3:4:25:28%:23:4.8126E-3:38:18:14:4:25 0/0:32:3:3:0:12:25%:6:1.087E-1:36:9:6:3:12 0/0:45:5:4:1:24:20.83%:14:2.4823E-2:37:19:16:3:24 0/0:40:5:5:0:20:25%:10:2.3562E-2:36:15:11:4:21 0/0:33:2:2:0:16:12.5%:15:2.4194E-1:37:14:10:4:16 0/0:42:3:2:1:13:23.08%:9:1.1E-1:37:10:9:1:13 0/0:44:3:3:0:13:23.08%:9:1.1E-1:37:10:10:0:15 0/0:31:3:2:1:17:17.65%:14:1.1364E-1:37:14:13:1:18 0/0:35:4:3:1:14:28.57%:6:4.8889E-2:36:10:8:2:14 0/1:32:7:6:1:24:29.17%:23:4.7006E-3:37:17:15:2:24 0/0:36:4:2:2:21:19.05%:15:5.3471E-2:36:17:17:0:21 0/0:40:4:2:2:12:33.33%:4:4.6584E-2:38:8:8:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:3:0:12:25%:6:1.087E-1:38:9:9:0:12 0/0:41:4:3:1:27:14.81%:23:5.5494E-2:37:23:21:2:28 0/1:39:6:5:1:17:35.29%:20:9.2021E-3:37:11:11:0:17 0/0:39:6:4:2:25:24%:14:1.1145E-2:37:19:17:2:27 0/0:38:4:3:1:17:23.53%:11:5.132E-2:37:13:10:3:17 0/1:39:12:9:3:27:44.44%:42:5.0681E-5:36:15:13:2:29 0/0:32:3:3:0:12:25%:6:1.087E-1:36:9:8:1:13 0/1:40:6:4:2:14:42.86%:20:7.971E-3:37:8:6:2:14 0/0:43:3:2:1:14:21.43%:9:1.1111E-1:36:11:9:2:14 0/0:51:3:2:1:14:21.43%:9:1.1111E-1:37:11:9:2:14 0/0:44:6:4:2:20:30%:7:1.0098E-2:36:14:14:0:22 0/0:35:1:1:0:15:6.67%:21:5E-1:37:14:12:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:3:0:20:15%:16:1.1538E-1:37:17:16:1:20 0/0:41:4:3:1:24:16.67%:18:5.461E-2:37:20:18:2:25 0/1:39:7:4:3:20:35%:23:4.158E-3:37:13:12:1:21 0/1:40:6:6:0:10:60%:22:5.418E-3:38:4:4:0:10 0/0:34:6:5:1:20:30%:7:1.0098E-2:36:14:13:1:21 0/0:34:1:1:0:14:7.14%:17:5E-1:37:13:13:0:14 0/0:43:3:2:1:11:27.27%:7:1.0714E-1:37:8:7:1:11 0/0:33:3:1:2:14:21.43%:9:1.1111E-1:36:11:10:1:14 0/0:36:3:1:2:19:15.79%:17:1.1486E-1:36:16:14:2:19 0/0:35:5:4:1:19:26.32%:10:2.3166E-2:36:14:14:0:19 0/0:35:3:3:0:14:21.43%:9:1.1111E-1:37:11:10:1:14 0/1:36:10:6:4:22:45.45%:35:2.6061E-4:38:12:11:1:22 0/1:38:8:6:2:25:32%:26:2.0146E-3:36:17:15:2:26 0/1:40:6:4:2:13:46.15%:21:7.4534E-3:40:7:6:1:13 0/0:36:3:1:2:16:18.75%:11:1.129E-1:38:13:11:2:17 0/0:41:4:4:0:16:25%:8:5.0612E-2:37:12:11:1:17 0/0:60:1:0:1:7:14.29%:8:5E-1:41:6:5:1:7 0/0:35:3:3:0:19:15.79%:17:1.1486E-1:37:16:11:5:20 0/1:38:10:5:5:27:37.04%:34:3.5253E-4:37:17:15:2:27 0/0:60:1:1:0:13:7.69%:18:5E-1:37:12:9:3:13 0/1:40:8:8:0:27:29.63%:26:2.1337E-3:37:19:18:1:28 0/0:35:1:1:0:12:8.33%:14:5E-1:38:11:9:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:3:0:3:19:15.79%:17:1.1486E-1:39:16:13:3:19 0/0:39:4:4:0:20:20%:13:5.3015E-2:37:16:15:1:20 0/0:35:3:1:2:11:27.27%:7:1.0714E-1:37:8:6:2:12 0/1:39:7:4:3:28:25%:22:5.1054E-3:37:21:17:4:30 0/0:32:5:2:3:21:23.81%:12:2.3921E-2:37:16:15:1:21 0/0:33:3:3:0:13:23.08%:9:1.1E-1:37:10:9:1:14 0/0:37:2:1:1:13:15.38%:13:2.4E-1:36:11:10:1:13 0/0:39:3:3:0:18:16.67%:14:1.1429E-1:38:15:12:3:18 0/0:38:1:0:1:9:11.11%:11:5E-1:38:8:6:2:10 0/0:36:2:0:2:9:22.22%:7:2.3529E-1:37:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:36:4:2:2:21:19.05%:15:5.3471E-2:37:17:15:2:21 0/1:46:7:6:1:24:29.17%:23:4.7006E-3:36:17:16:1:24 0/0:45:5:2:3:13:38.46%:4:1.9565E-2:36:8:8:0:13 0/0:31:2:1:1:11:18.18%:10:2.381E-1:36:9:9:0:12 0/0:49:2:1:1:11:18.18%:10:2.381E-1:37:9:7:2:11 0/0:37:3:0:3:19:15.79%:17:1.1486E-1:37:16:15:1:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:7:6:1:15:46.67%:25:3.1609E-3:37:8:8:0:15 0/0:37:5:3:2:12:41.67%:3:1.8634E-2:37:7:7:0:12 0/1:37:9:6:3:18:50%:32:5.1645E-4:37:9:7:2:18 0/1:34:7:5:2:17:41.18%:24:3.6151E-3:38:10:10:0:17 0/0:35:3:2:1:23:13.04%:22:1.1667E-1:37:20:18:2:24 0/1:39:7:4:3:16:43.75%:24:3.3988E-3:38:9:6:3:16 0/1:38:8:7:1:30:26.67%:26:2.2875E-3:37:22:18:4:33 0/1:41:9:6:3:17:52.94%:33:4.6348E-4:38:8:7:1:17 0/0:35:3:3:0:12:25%:6:1.087E-1:37:9:9:0:12 0/0:34:5:3:2:18:27.78%:8:2.2727E-2:37:13:11:2:18 0/0:34:4:3:1:12:33.33%:4:4.6584E-2:37:8:7:1:14 0/0:35:1:1:0:15:6.67%:21:5E-1:37:14:11:3:16 0/0:44:3:2:1:19:15.79%:17:1.1486E-1:37:16:15:1:19 0/1:36:7:5:2:24:29.17%:23:4.7006E-3:37:17:16:1:24 0/0:30:3:3:0:13:23.08%:9:1.1E-1:37:10:9:1:14 0/0:35:3:3:0:10:30%:4:1.0526E-1:35:7:7:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:60:3:2:1:16:18.75%:11:1.129E-1:37:13:9:4:17 0/0:39:6:5:1:25:24%:14:1.1145E-2:37:19:15:4:26 0/0:39:6:4:2:22:27.27%:9:1.057E-2:37:16:15:1:23 0/0:39:5:4:1:23:21.74%:14:2.4548E-2:37:18:16:2:23 0/0:35:4:2:2:32:12.5%:29:5.6596E-2:37:28:27:1:33 0/0:33:5:4:1:30:16.67%:21:2.6093E-2:36:25:24:1:31 0/0:34:5:4:1:21:23.81%:12:2.3921E-2:37:16:15:1:24 0/0:37:4:2:2:11:36.36%:4:4.5113E-2:38:7:6:1:12 0/0:34:5:4:1:21:23.81%:12:2.3921E-2:37:16:11:5:21 0/0:34:4:2:2:19:21.05%:13:5.251E-2:37:15:15:0:20 0/0:36:5:3:2:19:26.32%:10:2.3166E-2:37:14:14:0:22 0/1:36:6:6:0:15:40%:20:8.4291E-3:36:9:8:1:15 0/0:35:4:4:0:19:21.05%:13:5.251E-2:36:15:13:2:19 0/0:30:2:2:0:9:22.22%:7:2.3529E-1:37:7:4:3:10 0/1:47:9:2:7:21:42.86%:31:6.592E-4:36:12:10:2:21 0/1:37:10:6:4:29:34.48%:34:3.8387E-4:35:19:16:3:31 0/0:37:1:1:0:13:7.69%:18:5E-1:36:12:12:0:13 0/0:42:4:2:2:18:22.22%:10:5.1948E-2:37:14:11:3:18 0/0:40:3:2:1:11:27.27%:7:1.0714E-1:38:8:8:0:11 0/1:38:6:5:1:11:54.55%:22:6.192E-3:37:5:4:1:11 0/1:38:7:6:1:17:41.18%:24:3.6151E-3:35:10:10:0:19 0/0:37:1:1:0:15:6.67%:21:5E-1:36:14:14:0:15 0/1:34:6:5:1:13:46.15%:21:7.4534E-3:37:7:7:0:13 0/0:30:3:1:2:17:17.65%:14:1.1364E-1:37:14:12:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:33:3:1:2:13:23.08%:9:1.1E-1:36:10:10:0:13 0/0:35:3:3:0:15:20%:11:1.1207E-1:36:12:12:0:15 0/0:32:5:3:2:14:35.71%:4:2.037E-2:38:9:7:2:14 0/0:35:3:1:2:13:23.08%:9:1.1E-1:37:10:6:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:5:3:2:19:26.32%:10:2.3166E-2:37:14:13:1:20 0/0:36:5:4:1:18:27.78%:8:2.2727E-2:37:13:12:1:18 0/0:35:2:1:1:9:22.22%:7:2.3529E-1:38:7:6:1:9 0/0:45:3:1:2:12:25%:6:1.087E-1:36:9:9:0:12 0/0:39:6:4:2:23:26.09%:11:1.0777E-2:37:17:16:1:23 0/1:40:6:3:3:19:31.58%:20:9.828E-3:37:13:11:2:19 0/0:37:4:0:4:12:33.33%:4:4.6584E-2:38:8:7:1:12 0/0:36:3:2:1:13:23.08%:9:1.1E-1:35:10:8:2:13 0/0:41:4:3:1:21:19.05%:15:5.3471E-2:36:17:16:1:21 0/0:35:4:3:1:20:20%:13:5.3015E-2:36:16:16:0:20 0/0:37:3:2:1:9:33.33%:4:1.0294E-1:37:6:6:0:9 0/1:42:7:6:1:19:36.84%:23:3.9926E-3:40:12:9:3:19 0/0:55:4:1:3:25:16%:21:5.4928E-2:37:21:19:2:25 0/0:40:6:6:0:20:30%:7:1.0098E-2:37:14:14:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 MTB_anc 1631443 . G C . PASS AC=15;AF=0.056;AN=270;ANN=C|missense_variant|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3185C>G|p.Ala1062Gly|3185/3990|3185/3990|1062/1329||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631443G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631443G>C||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:7:4:3:21:33.33%:23:4.3101E-3:36:14:13:1:22 0/0:60:1:1:0:7:14.29%:8:5E-1:38:6:5:1:7 0/1:38:7:5:2:27:25.93%:22:5.0143E-3:36:20:11:9:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:2:2:0:14:14.29%:12:2.4074E-1:36:12:11:1:15 0/0:35:3:2:1:11:27.27%:7:1.0714E-1:34:8:7:1:11 0/0:32:3:3:0:18:16.67%:14:1.1429E-1:37:15:10:5:19 0/0:37:5:3:2:16:31.25%:6:2.1691E-2:37:11:11:0:17 0/0:34:3:2:1:16:18.75%:11:1.129E-1:36:13:12:1:16 0/1:36:6:5:1:17:35.29%:20:9.2021E-3:36:11:8:3:20 0/0:42:3:2:1:12:25%:6:1.087E-1:37:9:7:2:12 0/0:35:4:2:2:23:17.39%:18:5.4264E-2:36:19:15:4:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:39:5:4:1:13:38.46%:4:1.9565E-2:36:8:7:1:13 0/0:35:2:1:1:14:14.29%:12:2.4074E-1:37:12:10:2:14 0/0:37:3:2:1:11:27.27%:7:1.0714E-1:37:8:6:2:12 0/0:48:2:1:1:11:18.18%:10:2.381E-1:37:9:9:0:12 0/0:48:2:2:0:9:22.22%:7:2.3529E-1:38:7:5:2:9 0/0:37:2:2:0:8:25%:5:2.3333E-1:35:6:4:2:9 0/0:35:2:2:0:9:22.22%:7:2.3529E-1:36:7:3:4:9 0/0:34:3:3:0:11:27.27%:7:1.0714E-1:38:8:6:2:11 0/0:41:4:2:2:20:20%:13:5.3015E-2:36:16:12:4:21 0/0:34:2:2:0:11:18.18%:10:2.381E-1:36:9:6:3:11 0/0:42:5:4:1:24:20.83%:14:2.4823E-2:37:19:15:4:25 0/0:35:5:5:0:20:25%:10:2.3562E-2:37:15:11:4:20 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:14 0/0:48:2:1:1:12:16.67%:10:2.3913E-1:37:10:9:1:13 0/0:48:2:2:0:12:16.67%:10:2.3913E-1:37:10:10:0:14 0/0:0:0:0:0:13:0%:25:1E0:36:13:12:1:14 0/0:37:2:2:0:8:25%:5:2.3333E-1:34:6:4:2:12 0/0:36:5:5:0:24:20.83%:14:2.4823E-2:36:19:16:3:25 0/0:35:3:2:1:20:15%:16:1.1538E-1:36:17:16:1:20 0/0:50:3:2:1:9:33.33%:4:1.0294E-1:37:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:3:3:0:12:25%:6:1.087E-1:37:9:9:0:12 0/0:0:0:0:0:22:0%:40:1E0:37:22:20:2:23 0/0:37:4:3:1:15:26.67%:8:4.9808E-2:37:11:11:0:15 0/0:43:3:1:2:25:12%:25:1.1735E-1:36:22:18:4:27 0/0:42:4:3:1:14:28.57%:6:4.8889E-2:35:10:6:4:17 0/1:41:11:9:2:22:50%:40:9.1981E-5:36:11:9:2:26 0/0:34:3:3:0:11:27.27%:7:1.0714E-1:36:8:7:1:13 0/0:36:5:4:1:14:35.71%:4:2.037E-2:36:9:7:2:14 0/0:43:3:2:1:13:23.08%:9:1.1E-1:37:10:8:2:14 0/0:52:3:2:1:16:18.75%:11:1.129E-1:36:13:10:3:17 0/0:41:5:3:2:19:26.32%:10:2.3166E-2:37:14:14:0:21 0/0:0:0:0:0:16:0%:29:1E0:36:16:13:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:30:3:3:0:20:15%:16:1.1538E-1:37:17:16:1:20 0/0:33:4:3:1:23:17.39%:18:5.4264E-2:36:19:16:3:23 0/0:36:5:4:1:17:29.41%:8:2.2239E-2:36:12:11:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:36:5:5:0:18:27.78%:8:2.2727E-2:37:13:12:1:20 0/0:0:0:0:0:11:0%:22:1E0:38:11:11:0:13 0/0:47:2:1:1:10:20%:7:2.3684E-1:39:8:6:2:10 0/0:34:2:1:1:14:14.29%:12:2.4074E-1:37:12:11:1:14 0/0:34:2:1:1:18:11.11%:18:2.4286E-1:36:16:14:2:19 0/0:37:5:4:1:18:27.78%:8:2.2727E-2:37:13:13:0:18 0/0:35:3:3:0:11:27.27%:7:1.0714E-1:35:8:7:1:13 0/0:35:4:4:0:17:23.53%:11:5.132E-2:38:13:12:1:18 0/1:40:7:5:2:22:31.82%:23:4.4505E-3:36:15:13:2:22 0/0:41:4:3:1:11:36.36%:4:4.5113E-2:38:7:6:1:13 0/0:35:2:1:1:14:14.29%:12:2.4074E-1:38:12:11:1:15 0/0:41:3:3:0:13:23.08%:9:1.1E-1:36:10:9:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:41:3:3:0:18:16.67%:14:1.1429E-1:37:15:11:4:18 0/1:39:9:5:4:25:36%:30:8.1542E-4:36:16:14:2:27 0/0:60:1:1:0:12:8.33%:14:5E-1:36:11:8:3:13 0/1:38:8:8:0:25:32%:26:2.0146E-3:37:17:16:1:26 0/0:60:1:1:0:12:8.33%:14:5E-1:37:11:9:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:2:0:2:17:11.76%:18:2.4242E-1:39:15:12:3:17 0/0:42:4:4:0:20:20%:13:5.3015E-2:35:16:15:1:22 0/0:39:4:2:2:10:40%:3:4.3344E-2:38:6:4:2:11 0/1:40:7:4:3:30:23.33%:22:5.2713E-3:37:23:18:5:30 0/0:34:4:2:2:15:26.67%:8:4.9808E-2:37:11:10:1:18 0/0:37:2:2:0:13:15.38%:10:2.3913E-1:36:10:8:2:14 0/0:46:2:1:1:13:15.38%:13:2.4E-1:37:11:10:1:14 0/0:42:3:3:0:19:15.79%:17:1.1486E-1:36:16:12:4:20 0/0:33:1:0:1:10:10%:11:5E-1:36:9:7:2:10 0/0:34:1:0:1:9:11.11%:11:5E-1:36:8:8:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:1:1:0:17:5.88%:24:5E-1:37:16:15:1:18 0/0:50:6:5:1:23:26.09%:11:1.0777E-2:36:17:14:3:23 0/0:40:5:2:3:12:41.67%:3:1.8634E-2:37:7:7:0:13 0/0:37:1:1:0:10:10%:11:5E-1:35:9:9:0:12 0/0:38:1:0:1:11:9.09%:14:5E-1:35:10:8:2:11 0/0:34:3:1:2:19:15.79%:17:1.1486E-1:36:16:15:1:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:33:4:3:1:12:33.33%:4:4.6584E-2:38:8:8:0:12 0/0:39:4:3:1:11:36.36%:4:4.5113E-2:38:7:7:0:11 0/1:41:8:5:3:17:47.06%:28:1.3389E-3:37:9:8:1:18 0/0:43:4:3:1:14:28.57%:6:4.8889E-2:36:10:10:0:14 0/0:35:1:1:0:21:4.76%:31:5E-1:36:20:18:2:22 0/0:41:5:4:1:15:33.33%:6:2.1073E-2:36:10:6:4:15 0/0:35:6:6:0:32:18.75%:20:1.2087E-2:38:26:21:5:35 0/1:43:6:5:1:13:46.15%:21:7.4534E-3:37:7:6:1:14 0/0:33:2:2:0:11:18.18%:10:2.381E-1:37:9:9:0:11 0/0:35:3:2:1:16:18.75%:11:1.129E-1:36:13:10:3:19 0/0:34:4:3:1:13:30.77%:6:4.7826E-2:37:9:8:1:14 0/0:37:1:1:0:15:6.67%:21:5E-1:37:14:11:3:19 0/0:37:3:2:1:19:15.79%:17:1.1486E-1:36:16:15:1:20 0/1:38:7:5:2:19:36.84%:23:3.9926E-3:37:12:11:1:21 0/0:35:3:3:0:16:18.75%:11:1.129E-1:36:13:12:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:54:4:3:1:14:28.57%:6:4.8889E-2:38:10:6:4:15 0/0:34:3:3:0:20:15%:16:1.1538E-1:37:17:13:4:20 0/0:39:6:4:2:21:28.57%:9:1.0344E-2:37:15:13:2:23 0/0:42:4:3:1:22:18.18%:15:5.3885E-2:37:18:16:2:23 0/0:35:4:2:2:36:11.11%:35:5.7106E-2:37:31:29:2:37 0/0:36:3:3:0:28:10.71%:28:1.1818E-1:36:25:23:2:29 0/0:35:3:3:0:19:15.79%:17:1.1486E-1:36:16:15:1:21 0/0:34:4:2:2:10:40%:3:4.3344E-2:37:6:5:1:11 0/0:43:3:2:1:19:15.79%:17:1.1486E-1:37:16:11:5:19 0/0:37:2:2:0:17:11.76%:18:2.4242E-1:36:15:15:0:17 0/0:44:3:3:0:15:20%:11:1.1207E-1:36:12:12:0:18 0/0:35:5:5:0:17:29.41%:8:2.2239E-2:37:12:11:1:18 0/0:36:4:4:0:19:21.05%:13:5.251E-2:36:15:13:2:21 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:34:7:4:3:9 0/1:45:8:1:7:22:36.36%:27:1.8042E-3:37:14:11:3:22 0/0:36:6:4:2:25:24%:14:1.1145E-2:36:19:15:4:26 0/0:35:1:1:0:13:7.69%:18:5E-1:37:12:11:1:14 0/0:37:4:2:2:18:22.22%:10:5.1948E-2:37:14:11:3:18 0/0:36:3:2:1:10:30%:4:1.0526E-1:38:7:7:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:8:7:1:16:50%:29:1.2236E-3:35:8:7:1:19 0/0:35:1:1:0:13:7.69%:18:5E-1:36:12:12:0:13 0/0:37:4:4:0:13:30.77%:6:4.7826E-2:37:9:9:0:14 0/0:35:2:0:2:16:12.5%:15:2.4194E-1:37:14:12:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:2:1:1:12:16.67%:10:2.3913E-1:36:10:10:0:12 0/0:33:2:2:0:11:18.18%:10:2.381E-1:36:9:9:0:14 0/0:33:3:2:1:12:25%:6:1.087E-1:36:9:7:2:12 0/0:38:1:0:1:12:8.33%:14:5E-1:37:11:7:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:3:2:1:17:17.65%:14:1.1364E-1:37:14:12:2:19 0/0:33:4:3:1:17:23.53%:11:5.132E-2:36:13:11:2:18 0/0:35:1:1:0:7:14.29%:8:5E-1:39:6:5:1:7 0/0:32:3:1:2:10:30%:4:1.0526E-1:34:7:6:1:10 0/0:41:5:3:2:19:26.32%:10:2.3166E-2:35:14:12:2:22 0/0:41:5:3:2:17:29.41%:8:2.2239E-2:37:12:10:2:18 0/0:35:3:0:3:11:27.27%:7:1.0714E-1:36:8:6:2:13 0/0:32:2:1:1:11:18.18%:10:2.381E-1:36:9:7:2:12 0/0:41:4:3:1:21:19.05%:15:5.3471E-2:36:17:16:1:21 0/0:35:3:2:1:19:15.79%:17:1.1486E-1:35:16:16:0:21 0/0:37:3:2:1:10:30%:4:1.0526E-1:36:7:7:0:10 0/1:46:7:6:1:19:36.84%:23:3.9926E-3:39:12:9:3:19 0/0:54:4:1:3:25:16%:21:5.4928E-2:37:21:19:2:27 0/1:35:6:6:0:18:33.33%:20:9.5308E-3:36:12:12:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 1631448 . G A . PASS AC=6;AF=0.022;AN=268;ANN=A|synonymous_variant|LOW|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.3180C>T|p.Thr1060Thr|3180/3990|3180/3990|1060/1329||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631448G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631448G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:5:3:2:20:25%:10:2.3562E-2:33:15:12:3:21 0/0:50:1:1:0:7:14.29%:8:5E-1:36:6:5:1:7 0/0:40:4:4:0:25:16%:21:5.4928E-2:36:21:11:10:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:26:2:2:0:14:14.29%:12:2.4074E-1:36:12:11:1:16 0/0:37:2:1:1:10:20%:7:2.3684E-1:35:8:7:1:11 0/0:33:2:2:0:19:10.53%:21:2.4324E-1:35:17:12:5:19 0/1:35:6:4:2:17:35.29%:20:9.2021E-3:35:11:11:0:17 0/0:0:0:0:0:11:0%:22:1E0:37:11:11:0:14 0/0:35:4:3:1:17:23.53%:11:5.132E-2:35:13:10:3:18 0/0:43:3:2:1:11:27.27%:7:1.0714E-1:37:8:6:2:12 0/0:33:4:2:2:24:16.67%:18:5.461E-2:35:20:15:5:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:4:3:1:13:30.77%:6:4.7826E-2:35:9:7:2:14 0/0:38:2:1:1:13:15.38%:13:2.4E-1:36:11:9:2:13 0/0:37:2:1:1:10:20%:7:2.3684E-1:36:8:6:2:11 0/0:45:2:1:1:12:16.67%:10:2.3913E-1:37:10:9:1:12 0/0:48:2:2:0:8:25%:5:2.3333E-1:36:6:4:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:1:1:0:8:12.5%:8:5E-1:36:7:3:4:8 0/0:35:3:3:0:11:27.27%:7:1.0714E-1:36:8:6:2:11 0/0:36:2:0:2:18:11.11%:18:2.4286E-1:36:16:12:4:18 0/0:35:2:2:0:11:18.18%:10:2.381E-1:36:9:6:3:11 0/0:42:4:3:1:24:16.67%:18:5.461E-2:36:20:16:4:24 0/0:31:4:4:0:18:22.22%:10:5.1948E-2:36:14:10:4:19 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:14 0/0:44:2:1:1:12:16.67%:10:2.3913E-1:36:10:8:2:13 0/0:46:2:2:0:13:15.38%:13:2.4E-1:37:11:11:0:14 0/0:0:0:0:0:14:0%:25:1E0:34:14:13:1:15 0/0:32:1:1:0:10:10%:11:5E-1:39:9:7:2:12 0/0:34:5:5:0:24:20.83%:14:2.4823E-2:35:19:16:3:24 0/0:35:3:2:1:21:14.29%:19:1.1585E-1:34:18:16:2:21 0/0:60:2:1:1:10:20%:7:2.3684E-1:35:8:7:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:3:3:0:13:23.08%:9:1.1E-1:36:10:9:1:13 0/0:0:0:0:0:22:0%:40:1E0:36:22:20:2:23 0/0:34:4:3:1:14:28.57%:6:4.8889E-2:35:10:10:0:15 0/0:48:2:1:1:24:8.33%:27:2.4468E-1:36:22:17:5:24 0/0:39:3:2:1:13:23.08%:9:1.1E-1:36:10:7:3:15 0/1:38:11:9:2:24:45.83%:39:1.1047E-4:36:13:10:3:24 0/0:33:2:2:0:12:16.67%:10:2.3913E-1:35:10:9:1:12 0/0:32:4:3:1:12:33.33%:4:4.6584E-2:35:8:6:2:12 0/0:43:2:1:1:13:15.38%:13:2.4E-1:36:11:9:2:13 0/0:43:3:2:1:16:18.75%:11:1.129E-1:36:13:11:2:17 0/0:42:4:3:1:18:22.22%:10:5.1948E-2:36:14:13:1:20 0/0:0:0:0:0:17:0%:33:1E0:36:17:14:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:2:2:0:18:11.11%:18:2.4286E-1:35:16:15:1:20 0/0:37:1:1:0:20:5%:27:5E-1:35:19:16:3:21 0/0:36:4:3:1:18:22.22%:10:5.1948E-2:36:14:12:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:5:5:0:19:26.32%:10:2.3166E-2:36:14:13:1:19 0/0:0:0:0:0:11:0%:22:1E0:37:11:11:0:12 0/0:48:2:1:1:10:20%:7:2.3684E-1:38:8:6:2:10 0/0:33:2:1:1:14:14.29%:12:2.4074E-1:36:12:11:1:14 0/0:37:1:0:1:18:5.56%:24:5E-1:36:17:14:3:18 0/0:42:3:2:1:16:18.75%:11:1.129E-1:36:13:13:0:17 0/0:36:3:3:0:10:30%:4:1.0526E-1:35:7:6:1:12 0/0:36:3:3:0:18:16.67%:14:1.1429E-1:36:15:13:2:18 0/1:35:7:5:2:20:35%:23:4.158E-3:36:13:11:2:21 0/0:42:2:1:1:13:15.38%:13:2.4E-1:35:11:9:2:14 0/0:34:1:0:1:13:7.69%:18:5E-1:35:12:10:2:13 0/0:33:2:2:0:12:16.67%:10:2.3913E-1:36:10:9:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:60:1:1:0:17:5.88%:24:5E-1:37:16:11:5:17 0/0:37:5:3:2:23:21.74%:14:2.4548E-2:36:18:14:4:25 0/0:60:1:1:0:15:6.67%:21:5E-1:36:14:9:5:15 0/0:40:4:4:0:22:18.18%:15:5.3885E-2:36:18:17:1:24 0/0:60:1:1:0:13:7.69%:18:5E-1:36:12:10:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:37:14:11:3:15 0/0:41:4:4:0:22:18.18%:15:5.3885E-2:35:18:15:3:22 0/0:36:3:2:1:10:30%:4:1.0526E-1:35:7:5:2:10 0/0:41:6:4:2:28:21.43%:16:1.1603E-2:37:22:17:5:28 0/0:31:3:2:1:13:23.08%:9:1.1E-1:36:10:9:1:15 0/0:32:1:1:0:11:9.09%:14:5E-1:36:10:9:1:14 0/0:39:1:0:1:13:7.69%:18:5E-1:35:12:11:1:14 0/0:60:1:1:0:17:5.88%:24:5E-1:36:16:11:5:18 0/0:0:0:0:0:10:0%:17:1E0:36:10:7:3:10 0/0:37:1:0:1:9:11.11%:11:5E-1:36:8:8:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:1:1:0:20:5%:27:5E-1:36:19:17:2:20 0/0:42:6:5:1:22:27.27%:9:1.057E-2:35:16:13:3:23 0/0:40:4:2:2:12:33.33%:4:4.6584E-2:37:8:7:1:12 0/0:37:1:1:0:11:9.09%:14:5E-1:34:10:10:0:12 0/0:37:1:0:1:11:9.09%:14:5E-1:35:10:7:3:12 0/0:35:3:1:2:19:15.79%:17:1.1486E-1:36:16:15:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:32:3:2:1:11:27.27%:7:1.0714E-1:36:8:8:0:12 0/0:35:2:1:1:8:25%:5:2.3333E-1:35:6:6:0:10 0/0:39:5:3:2:16:31.25%:6:2.1073E-2:35:10:7:3:17 0/0:37:4:3:1:13:30.77%:6:4.7826E-2:37:9:9:0:13 0/0:29:1:1:0:22:4.55%:31:5E-1:35:21:19:2:22 0/0:41:5:4:1:15:33.33%:6:2.1073E-2:36:10:6:4:15 0/0:37:4:4:0:31:12.9%:29:5.6405E-2:36:27:22:5:32 0/0:46:5:4:1:13:38.46%:4:1.9565E-2:36:8:7:1:13 0/0:24:1:1:0:9:11.11%:11:5E-1:36:8:8:0:9 0/0:32:3:3:0:18:16.67%:14:1.1429E-1:36:15:11:4:18 0/0:31:3:3:0:13:23.08%:9:1.1E-1:36:10:9:1:13 0/0:32:1:1:0:18:5.56%:24:5E-1:35:17:14:3:19 0/0:36:2:1:1:18:11.11%:18:2.4286E-1:36:16:15:1:18 0/0:40:4:4:0:20:20%:13:5.3015E-2:35:16:14:2:21 0/0:35:2:2:0:16:12.5%:15:2.4194E-1:34:14:12:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:51:4:3:1:15:26.67%:8:4.9808E-2:36:11:7:4:15 0/0:37:1:1:0:18:5.56%:24:5E-1:37:17:13:4:19 0/0:39:6:4:2:21:28.57%:9:1.0344E-2:36:15:13:2:21 0/0:40:4:3:1:21:19.05%:15:5.3471E-2:36:17:15:2:23 0/0:37:2:0:2:34:5.88%:43:2.4627E-1:36:32:29:3:38 0/0:32:4:4:0:30:13.33%:26:5.62E-2:35:26:24:2:30 0/0:37:2:2:0:20:10%:21:2.4359E-1:35:18:16:2:21 0/0:37:2:1:1:9:22.22%:7:2.3529E-1:36:7:6:1:10 0/0:37:2:1:1:18:11.11%:18:2.4286E-1:36:16:10:6:18 0/0:37:1:1:0:16:6.25%:21:5E-1:36:15:15:0:17 0/0:37:2:2:0:15:13.33%:16:2.4138E-1:34:13:13:0:17 0/0:34:5:5:0:18:27.78%:8:2.2727E-2:36:13:12:1:18 0/0:33:2:2:0:17:11.76%:18:2.4242E-1:35:15:12:3:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:49:6:0:6:20:30%:7:1.0098E-2:37:14:11:3:20 0/0:37:5:3:2:24:20.83%:14:2.4823E-2:35:19:15:4:25 0/0:29:1:1:0:14:7.14%:17:5E-1:36:13:12:1:14 0/0:37:4:2:2:19:21.05%:13:5.251E-2:36:15:11:4:19 0/0:35:2:1:1:10:20%:7:2.3684E-1:37:8:8:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:34:7:6:1:17:41.18%:24:3.6151E-3:35:10:9:1:20 0/0:35:1:1:0:11:9.09%:14:5E-1:35:10:10:0:12 0/0:33:3:3:0:12:25%:6:1.087E-1:36:9:9:0:13 0/0:37:1:0:1:16:6.25%:21:5E-1:35:15:12:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:36:2:1:1:11:18.18%:10:2.381E-1:35:9:9:0:11 0/0:36:2:2:0:14:14.29%:12:2.4074E-1:34:12:12:0:15 0/0:34:3:2:1:13:23.08%:9:1.1E-1:36:10:7:3:13 0/0:39:1:0:1:13:7.69%:18:5E-1:36:12:7:5:13 0/0:35:2:0:2:8:25%:5:2.3333E-1:34:6:5:1:8 0/0:33:4:3:1:19:21.05%:13:5.251E-2:35:15:13:2:19 0/0:32:4:3:1:17:23.53%:11:5.132E-2:36:13:11:2:17 0/0:37:1:1:0:7:14.29%:8:5E-1:37:6:5:1:7 0/0:31:2:1:1:9:22.22%:7:2.3529E-1:35:7:6:1:9 0/0:39:5:3:2:22:22.73%:12:2.4248E-2:35:17:15:2:22 0/0:41:5:3:2:18:27.78%:8:2.2727E-2:36:13:11:2:18 0/0:39:1:0:1:12:8.33%:14:5E-1:36:11:7:4:13 0/0:28:1:1:0:11:9.09%:14:5E-1:36:10:8:2:11 0/0:43:3:2:1:17:17.65%:14:1.1364E-1:36:14:13:1:20 0/0:34:2:2:0:19:10.53%:21:2.4324E-1:35:17:16:1:19 0/0:37:3:2:1:11:27.27%:7:1.0714E-1:36:8:7:1:11 0/1:45:7:6:1:19:36.84%:23:3.9926E-3:38:12:9:3:19 0/0:54:4:1:3:29:13.79%:26:5.5981E-2:36:25:21:4:29 0/1:35:6:6:0:19:31.58%:20:9.828E-3:35:13:13:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 1631646 . CCCG C . PASS AC=1;AF=3.650e-03;AN=274;ANN=C|disruptive_inframe_deletion|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.2979_2981delCGG|p.Gly994del|2981/3990|2979/3990|993/1329||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631647_1631649delCCG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631647_1631649delCCG||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:1:0:1:22:4.55%:31:5E-1:41:21:8:13:22 0/0:0:0:0:0:7:0%:14:1E0:41:7:5:2:7 0/0:38:1:1:0:21:4.76%:31:5E-1:41:20:8:12:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:1:1:0:12:8.33%:14:5E-1:40:11:5:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:47:10:4:6:10 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:11 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:15 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:1:1:0:19:5.26%:28:5E-1:35:18:8:10:19 0/0:0:0:0:0:7:0%:14:1E0:40:7:4:3:7 0/0:0:0:0:0:12:0%:21:1E0:42:12:7:5:12 0/0:0:0:0:0:13:0%:25:1E0:35:13:7:6:14 0/0:34:3:1:2:14:21.43%:9:1.1111E-1:36:11:6:5:14 0/0:0:0:0:0:9:0%:18:1E0:42:9:8:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:35:8:7:1:8 0/0:0:0:0:0:8:0%:14:1E0:42:8:6:2:9 0/0:60:1:1:0:15:6.67%:21:5E-1:39:14:6:8:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:9 0/0:0:0:0:0:26:0%:47:1E0:37:26:18:8:26 0/0:0:0:0:0:12:0%:21:1E0:40:12:6:6:12 0/0:0:0:0:0:7:0%:14:1E0:40:7:4:3:7 0/0:37:1:1:0:20:5%:27:5E-1:40:19:9:10:20 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:26 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:16 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:18 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:17 0/0:0:0:0:0:8:0%:14:1E0:37:8:5:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:42:7:3:4:7 0/0:37:2:2:0:23:8.7%:28:2.4444E-1:36:21:8:13:23 0/0:38:1:1:0:18:5.56%:24:5E-1:38:17:10:7:18 0/0:0:0:0:0:14:0%:25:1E0:40:14:8:6:14 0/0:0:0:0:0:13:0%:25:1E0:42:13:2:11:15 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:13:0%:25:1E0:41:13:7:6:13 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:14 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:10 0/0:0:0:0:0:14:0%:25:1E0:36:14:6:8:14 0/0:30:1:0:1:10:10%:11:5E-1:35:9:3:6:10 0/0:0:0:0:0:16:0%:29:1E0:42:16:6:10:16 0/0:0:0:0:0:8:0%:14:1E0:47:8:3:5:8 0/0:0:0:0:0:14:0%:25:1E0:37:14:4:10:15 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 0/0:0:0:0:0:11:0%:22:1E0:36:11:6:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:1:0:27:3.7%:41:5E-1:37:26:18:8:29 0/0:0:0:0:0:8:0%:14:1E0:42:8:3:5:8 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:13 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:10 0/0:0:0:0:0:16:0%:29:1E0:39:16:6:10:16 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:8:4:12 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:39:13:6:7:14 0/0:38:1:1:0:12:8.33%:14:5E-1:39:11:4:7:12 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:7 0/0:0:0:0:0:13:0%:25:1E0:42:13:6:7:13 0/0:37:1:1:0:19:5.26%:28:5E-1:39:18:7:11:19 0/0:0:0:0:0:15:0%:29:1E0:41:15:11:4:16 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:16 0/0:0:0:0:0:11:0%:22:1E0:46:11:7:4:11 0/0:0:0:0:0:7:0%:14:1E0:41:7:1:6:7 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:14 0/0:0:0:0:0:18:0%:32:1E0:35:18:6:12:18 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:16 0/0:38:1:1:0:14:7.14%:17:5E-1:37:13:6:7:14 0/0:37:1:1:0:14:7.14%:17:5E-1:41:13:4:9:14 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:0:0:0:0:8:0%:14:1E0:39:8:5:3:8 0/0:0:0:0:0:9:0%:18:1E0:36:9:5:4:9 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:20 0/0:0:0:0:0:10:0%:17:1E0:43:10:8:2:11 0/0:0:0:0:0:9:0%:18:1E0:43:9:7:2:9 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:11 0/0:0:0:0:0:9:0%:18:1E0:36:9:5:4:9 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:9 0/0:0:0:0:0:11:0%:22:1E0:47:11:6:5:11 0/0:0:0:0:0:11:0%:22:1E0:38:11:9:2:11 0/0:0:0:0:0:13:0%:25:1E0:41:13:9:4:14 0/0:0:0:0:0:25:0%:48:1E0:36:25:7:18:25 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:11 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:34:15:7:8:15 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:20 0/0:0:0:0:0:19:0%:37:1E0:34:19:9:10:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:14 0/0:38:1:0:1:15:6.67%:21:5E-1:41:14:7:7:15 0/0:38:1:1:0:22:4.55%:31:5E-1:37:21:8:13:22 0/1:44:9:6:3:12:75%:37:1.6826E-4:40:3:2:1:12 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:12 0/0:37:1:1:0:7:14.29%:8:5E-1:41:6:3:3:7 0/0:0:0:0:0:14:0%:25:1E0:39:14:9:5:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:13:6:19 0/0:0:0:0:0:21:0%:40:1E0:39:21:17:4:21 0/0:37:1:1:0:23:4.35%:34:5E-1:38:22:9:13:23 0/0:38:1:0:1:28:3.57%:41:5E-1:38:27:13:14:29 0/0:38:1:0:1:31:3.23%:44:5E-1:36:29:11:18:31 0/0:34:1:1:0:27:3.7%:41:5E-1:40:26:15:11:27 0/0:0:0:0:0:14:0%:25:1E0:36:14:10:4:14 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:18 0/0:0:0:0:0:24:0%:44:1E0:36:24:13:11:24 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:12 0/0:0:0:0:0:13:0%:25:1E0:39:13:8:5:13 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:10 0/0:0:0:0:0:13:0%:25:1E0:35:13:10:3:13 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:14 0/0:0:0:0:0:13:0%:25:1E0:40:13:6:7:13 0/0:0:0:0:0:11:0%:22:1E0:40:11:3:8:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:1:0:1:10:10%:11:5E-1:37:9:4:5:10 0/0:37:1:1:0:12:8.33%:14:5E-1:34:11:1:10:12 0/0:38:1:1:0:13:7.69%:18:5E-1:32:12:8:4:13 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:8 0/0:0:0:0:0:9:0%:18:1E0:41:9:4:5:10 0/0:0:0:0:0:14:0%:25:1E0:35:14:8:6:15 0/0:31:1:0:1:16:6.25%:21:5E-1:34:15:7:8:16 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 0/0:0:0:0:0:7:0%:14:1E0:41:7:5:2:7 0/0:0:0:0:0:17:0%:33:1E0:39:17:12:5:17 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:10 0/0:38:1:0:1:12:8.33%:14:5E-1:38:11:4:7:13 0/0:0:0:0:0:8:0%:14:1E0:42:8:4:4:9 0/0:38:1:0:1:12:8.33%:14:5E-1:37:11:5:6:12 0/0:0:0:0:0:14:0%:25:1E0:40:14:5:9:14 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:17 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:7:0%:14:1E0:41:7:3:4:7 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:19 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:14 0/0:38:1:1:0:16:6.25%:21:5E-1:36:15:6:9:16 0/0:37:1:1:0:21:4.76%:31:5E-1:38:20:9:11:22 0/0:38:2:1:1:27:7.41%:34:2.4528E-1:37:25:12:13:27 0/0:0:0:0:0:7:0%:14:1E0:41:7:3:4:8 MTB_anc 1631845 . C G . PASS AC=282;AF=1.00;AN=282;ANN=G|missense_variant|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.2783G>C|p.Gly928Ala|2783/3990|2783/3990|928/1329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1631845C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1631845C>G||||||;HET=0;WT=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:29:27:2:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:21:20:1:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:36:28:8:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:36:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:21:18:3:22:95.45%:99:1.0931E-11:37:1:0:1:24 1/1:38:14:10:4:15:93.33%:76:2.4927E-8:0:0:0:0:16 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:33:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:33:12:10:2:12:100%:64:3.698E-7:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:35:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:35:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:20:19:1:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:33:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:20:18:2:21:100%:99:7.2544E-12:0:0:0:0:24 1/1:35:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:33:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:20:20:0:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 MTB_anc 1632518 . T TGGCGCCGTTGCCGCCGGCCCCACCGTC . PASS AC=31;AF=0.140;AN=222;ANN=TGGCGCCGTTGCCGCCGGCCCCACCGTC|inframe_insertion|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.2109_2110insGACGGTGGGGCCGGCGGCAACGGCGCC|p.Ala703_Asn704insAspGlyGlyAlaGlyGlyAsnGlyAla|2109/3990|2109/3990|703/1329||,TGGCGCCGTTGCCGCCGGCCCCACCGTC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1632518_1632519insGGCGCCGTTGCCGCCGGCCCCACCGTC||||||,TGGCGCCGTTGCCGCCGGCCCCACCGTC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1632518_1632519insGGCGCCGTTGCCGCCGGCCCCACCGTC||||||;HOM=0;set=filterInvariant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:9:9:0:22:40.91%:31:7.0165E-4:37:13:5:8:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:6:0:13:46.15%:21:6.865E-3:36:6:2:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:4:4:0:15:26.67%:8:4.9808E-2:38:11:5:6:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:2:2:0:12:16.67%:10:2.381E-1:37:9:4:5:12 0/0:37:4:4:0:13:30.77%:6:4.7826E-2:38:9:5:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:4:3:1:14:28.57%:6:4.7826E-2:36:9:1:8:15 0/0:35:1:1:0:7:14.29%:8:5E-1:43:6:5:1:7 0/0:37:4:3:1:10:40%:3:4.3344E-2:39:6:2:4:10 0/0:48:4:2:2:13:30.77%:4:4.6584E-2:39:8:6:2:13 0/0:37:3:3:0:11:27.27%:7:1.0714E-1:38:8:7:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:1:1:0:13:7.69%:14:5E-1:38:11:4:7:14 0/0:41:6:5:1:23:26.09%:9:1.057E-2:39:16:10:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:39:5:4:1:12:41.67%:3:1.8634E-2:34:7:3:4:12 0/0:30:4:4:0:14:26.67%:8:4.9808E-2:35:11:4:7:15 0/0:37:5:5:0:13:38.46%:3:1.8634E-2:44:7:3:4:14 0/0:49:2:1:1:8:25%:5:2.3333E-1:38:6:4:2:8 0/0:37:3:1:2:13:23.08%:6:1.087E-1:38:9:5:4:13 0/0:37:3:3:0:14:21.43%:9:1.1111E-1:46:11:7:4:15 0/0:32:1:0:1:11:9.09%:14:5E-1:36:10:4:6:11 0/0:36:3:3:0:11:27.27%:7:1.0714E-1:42:8:4:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:25:2:2:0:8:22.22%:7:2.3529E-1:36:7:5:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:40:7:6:1:15:46.67%:25:3.1609E-3:41:8:3:5:15 0/0:37:3:2:1:13:23.08%:6:1.087E-1:38:9:3:6:13 0/0:37:4:4:0:21:19.05%:13:5.3015E-2:43:16:12:4:21 0/1:37:7:6:1:19:36.84%:24:3.8123E-3:35:11:4:7:19 0/1:37:6:4:2:16:37.5%:20:8.837E-3:35:10:4:6:17 0/1:40:6:5:1:18:33.33%:20:9.5308E-3:36:12:1:11:18 0/0:44:3:3:0:14:21.43%:9:1.1111E-1:42:11:6:5:15 0/0:37:2:2:0:13:15.38%:13:2.4E-1:41:11:4:7:14 0/0:36:3:3:0:13:23.08%:9:1.1E-1:35:10:4:6:13 0/1:41:8:8:0:18:44.44%:28:1.4461E-3:37:10:3:7:18 0/1:35:7:7:0:21:33.33%:23:4.158E-3:43:13:6:7:22 0/0:38:2:2:0:11:18.18%:10:2.381E-1:35:9:3:6:12 0/0:38:5:3:2:16:31.25%:6:2.1691E-2:38:11:5:6:16 0/0:35:4:4:0:15:26.67%:6:4.8889E-2:34:10:5:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:46:5:4:1:17:29.41%:8:2.2239E-2:40:12:3:9:18 0/0:37:2:1:1:8:25%:5:2.3333E-1:36:6:2:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:39:4:3:1:14:28.57%:6:4.8889E-2:44:10:2:8:15 0/0:43:2:2:0:17:11.76%:18:2.4242E-1:37:15:6:9:18 0/0:37:2:2:0:10:20%:7:2.3684E-1:43:8:4:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:5:5:0:11:45.45%:3:1.7544E-2:36:6:1:5:11 0/0:34:3:2:1:13:23.08%:9:1.1E-1:38:10:4:6:13 0/0:37:1:1:0:12:8.33%:14:5E-1:38:11:5:6:12 0/0:35:2:2:0:12:16.67%:10:2.3913E-1:44:10:4:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:5:4:1:15:33.33%:6:2.1073E-2:38:10:4:6:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:43:6:5:1:18:33.33%:20:9.5308E-3:43:12:6:6:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:45:3:2:1:14:20%:9:1.1111E-1:41:11:5:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:0:1:15:6.67%:18:5E-1:39:12:3:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:42:4:3:1:15:26.67%:8:4.9808E-2:38:11:4:7:15 0/1:39:7:4:3:15:46.67%:25:3.1609E-3:37:8:5:3:16 0/0:37:2:2:0:15:13.33%:16:2.4138E-1:41:13:6:7:16 0/0:37:4:3:1:14:28.57%:6:4.8889E-2:37:10:5:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:2:1:10:30%:4:1.0294E-1:36:6:1:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:9 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:37:20:7:13:22 0/0:43:3:2:1:16:18.75%:11:1.129E-1:38:13:5:8:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:1:1:0:7:14.29%:8:5E-1:39:6:3:3:7 0/1:34:6:5:1:12:50%:21:6.865E-3:43:6:4:2:12 0/0:42:5:4:1:12:41.67%:3:1.8634E-2:43:7:3:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:6:1:11:63.64%:27:1.935E-3:36:4:3:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:33:7:5:2:10:63.64%:27:1.935E-3:38:4:1:3:11 0/0:48:4:4:0:10:40%:3:4.3344E-2:36:6:6:0:10 0/1:37:8:8:0:20:40%:27:1.638E-3:37:12:8:4:20 0/1:37:6:4:2:16:37.5%:20:8.837E-3:40:10:4:6:16 0/1:35:6:4:2:20:30%:20:9.828E-3:39:13:7:6:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:47:2:1:1:9:22.22%:7:2.3529E-1:38:7:2:5:9 0/1:38:6:5:1:16:37.5%:20:8.837E-3:38:10:3:7:17 0/0:44:3:3:0:9:33.33%:4:1.0294E-1:36:6:3:3:9 0/0:37:1:0:1:9:11.11%:11:5E-1:40:8:4:4:9 0/0:43:4:4:0:12:33.33%:4:4.6584E-2:39:8:3:5:14 0/1:39:9:7:2:18:50%:32:5.1645E-4:41:9:3:6:18 0/1:36:9:9:0:17:52.94%:33:4.6348E-4:40:8:7:1:17 0/0:36:2:2:0:10:20%:7:2.3684E-1:38:8:4:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:45:8:5:3:16:50%:29:1.2236E-3:42:8:2:6:16 0/0:37:3:3:0:13:23.08%:9:1.1E-1:44:10:4:6:14 0/1:40:7:5:2:19:36.84%:23:3.9926E-3:38:12:8:4:19 0/0:48:4:2:2:12:33.33%:4:4.6584E-2:40:8:5:3:13 0/1:40:8:6:2:23:34.78%:27:1.8042E-3:37:14:7:7:23 0/1:37:6:5:1:19:31.58%:20:9.5308E-3:44:12:7:5:21 0/1:42:8:5:3:26:30.77%:26:2.0146E-3:36:17:10:7:26 0/0:37:4:4:0:19:21.05%:10:5.1948E-2:35:14:5:9:19 0/1:44:7:5:2:16:43.75%:24:3.3988E-3:37:9:4:5:16 0/0:37:5:5:0:11:45.45%:3:1.7544E-2:36:6:2:4:12 0/0:37:5:5:0:13:38.46%:4:1.9565E-2:35:8:2:6:13 0/0:37:2:2:0:8:25%:5:2.3333E-1:33:6:1:5:8 0/1:40:6:5:1:16:37.5%:20:8.837E-3:41:10:6:4:16 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:37:7:3:4:9 0/1:36:6:5:1:17:35.29%:20:9.2021E-3:38:11:4:7:17 0/1:37:9:5:4:19:47.37%:32:5.667E-4:37:10:3:7:19 0/0:37:4:4:0:11:36.36%:4:4.5113E-2:35:7:3:4:12 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:36:7:3:4:9 0/0:51:3:2:1:10:30%:4:1.0526E-1:42:7:4:3:10 0/0:37:1:1:0:8:12.5%:8:5E-1:38:7:1:6:8 0/0:48:4:3:1:12:33.33%:4:4.6584E-2:38:8:4:4:12 0/0:38:1:0:1:7:14.29%:8:5E-1:39:6:2:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:1:1:0:8:12.5%:8:5E-1:35:7:2:5:8 0/0:37:3:3:0:10:30%:4:1.0294E-1:39:6:2:4:11 0/0:37:2:2:0:12:16.67%:10:2.3913E-1:40:10:3:7:12 0/0:38:1:0:1:13:7.69%:14:5E-1:38:10:2:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:38:2:2:0:12:16.67%:10:2.381E-1:39:9:3:6:13 0/0:42:5:5:0:14:35.71%:4:1.9565E-2:35:8:5:3:14 0/0:42:4:3:1:14:28.57%:6:4.8889E-2:41:10:4:6:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:38:5:5:0:13:38.46%:4:1.9565E-2:41:8:4:4:14 0/0:43:4:3:1:11:36.36%:4:4.5113E-2:40:7:1:6:11 0/0:48:4:3:1:16:25%:8:5.0612E-2:36:12:7:5:16 0/1:37:9:9:0:18:50%:32:5.1645E-4:39:9:2:7:18 0/0:36:4:4:0:13:30.77%:4:4.6584E-2:39:8:1:7:14 0/1:37:8:7:1:11:72.73%:32:5.16E-4:36:3:0:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:7:6:1:18:38.89%:24:3.8123E-3:40:11:5:6:19 0/0:38:1:1:0:14:7.14%:18:5E-1:35:12:3:9:14 0/0:41:3:3:0:10:30%:4:1.0526E-1:39:7:3:4:10 MTB_anc 1633050 . A G . PASS AC=298;AF=0.993;AN=300;ANN=G|synonymous_variant|LOW|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.1578T>C|p.Gly526Gly|1578/3990|1578/3990|526/1329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1633050A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1633050A>G||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 0/1:46:14:9:5:16:87.5%:76:2.4927E-8:0:0:0:0:17 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:40:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:9:3:6:10:90%:42:5.9538E-5:38:1:1:0:11 1/1:42:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:36:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:41:37:22:15:38:97.37%:99:5.7269E-22:0:0:0:0:39 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:40:17:9:8:18:94.44%:86:2.0936E-9:37:1:1:0:18 1/1:37:32:19:13:33:96.97%:99:4.7095E-18:37:1:1:0:34 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:13:6:7:14:92.86%:64:3.7391E-7:32:1:1:0:16 1/1:42:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:20:11:9:21:95.24%:99:7.2544E-12:0:0:0:0:22 0/1:40:15:10:5:17:88.24%:71:7.3277E-8:37:2:2:0:17 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:28:14:14:29:96.55%:99:9.9776E-16:37:1:1:0:30 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:15:9:6:16:93.75%:75:2.8282E-8:37:1:1:0:17 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:26:16:10:27:96.3%:99:1.4382E-14:37:1:1:0:30 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:15:10:5:16:93.75%:75:2.8282E-8:33:1:1:0:16 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:14:3:11:15:93.33%:69:1.0315E-7:38:1:0:1:15 MTB_anc 1634018 . C T . PASS AC=2;AF=1.00;AN=2;ANN=T|missense_variant|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.610G>A|p.Gly204Ser|610/3990|610/3990|204/1329||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1634018C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1634018C>T||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. MTB_anc 1634580 . T C . PASS AC=71;AF=0.237;AN=300;ANN=C|synonymous_variant|LOW|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.48A>G|p.Leu16Leu|48/3990|48/3990|16/1329||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1634580T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1634580T>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:9:7:2:56:16.07%:28:1.3788E-3:41:47:26:21:57 0/1:43:8:6:2:22:36.36%:27:1.8042E-3:45:14:4:10:22 0/1:36:9:8:1:46:19.57%:28:1.2682E-3:44:37:21:16:46 0/1:44:9:5:4:37:24.32%:29:1.1256E-3:44:28:11:17:39 0/0:35:2:1:1:30:6.67%:37:2.4576E-1:38:28:15:13:30 0/0:37:2:2:0:31:6.45%:40:2.459E-1:42:29:11:18:32 0/1:37:13:8:5:45:28.89%:43:4.4424E-5:49:32:11:21:45 0/0:37:1:1:0:25:4%:38:5E-1:43:24:13:11:25 0/1:41:10:6:4:35:28.57%:33:4.51E-4:39:24:16:8:37 0/1:41:14:9:5:47:29.79%:47:1.9604E-5:40:33:18:15:48 0/1:39:7:7:0:28:25%:22:5.1054E-3:42:21:10:11:30 0/1:41:12:8:4:44:27.27%:39:1.027E-4:40:32:19:13:48 0/1:42:8:7:1:23:34.78%:27:1.8791E-3:47:15:7:8:25 0/1:37:18:14:4:54:33.33%:61:6.9602E-7:42:36:19:17:55 0/1:40:7:4:3:28:25%:22:5.1054E-3:43:21:8:13:28 0/0:43:6:5:1:27:22.22%:16:1.1461E-2:39:21:15:6:29 0/1:35:7:6:1:34:20.59%:22:5.5492E-3:43:27:14:13:35 0/1:36:9:6:3:32:28.12%:29:1.0185E-3:43:23:9:14:33 0/0:37:2:1:1:13:15.38%:13:2.4E-1:42:11:7:4:14 0/0:37:4:3:1:25:16%:21:5.4928E-2:40:21:10:11:27 0/0:36:3:3:0:40:7.5%:46:1.2025E-1:40:37:22:15:40 0/1:38:20:13:7:54:37.04%:69:1.0949E-7:39:34:17:17:55 0/1:40:8:3:5:34:23.53%:26:2.4173E-3:45:25:13:12:34 0/1:39:12:8:4:52:23.08%:39:1.1939E-4:41:40:24:16:54 0/1:37:8:6:2:47:17.02%:25:2.8033E-3:42:38:21:17:47 0/0:36:1:1:0:24:4.17%:34:5E-1:43:23:11:12:24 0/1:37:8:5:3:28:28.57%:26:2.188E-3:38:20:12:8:29 0/0:37:6:5:1:25:24%:14:1.1145E-2:41:19:11:8:26 0/1:36:10:4:6:27:37.04%:34:3.5253E-4:40:17:11:6:28 0/0:37:2:2:0:31:6.45%:40:2.459E-1:43:29:14:15:33 0/1:37:21:11:10:52:40.38%:74:3.7578E-8:41:31:16:15:53 0/0:37:6:2:4:40:15%:30:1.2773E-2:41:34:23:11:43 0/0:38:2:0:2:22:9.09%:24:2.4419E-1:47:20:13:7:22 0/1:37:7:4:3:23:30.43%:23:4.5803E-3:37:16:7:9:24 0/0:40:6:4:2:39:15.38%:31:1.2702E-2:43:33:14:19:39 0/1:39:11:6:5:35:31.43%:37:1.9282E-4:39:24:9:15:35 0/1:38:19:9:10:50:38%:66:2.2975E-7:43:31:16:15:53 0/1:40:27:17:10:72:37.5%:94:3.6614E-10:46:45:29:16:72 0/0:37:2:2:0:41:4.88%:57:2.4691E-1:41:39:20:19:42 0/1:37:9:4:5:47:19.15%:28:1.2811E-3:42:38:17:21:48 0/0:37:3:2:1:40:7.5%:46:1.2025E-1:40:37:14:23:42 0/1:44:7:4:3:50:14%:22:6.2398E-3:41:43:26:17:51 0/1:37:8:6:2:30:26.67%:26:2.2875E-3:40:22:11:11:31 0/1:38:18:12:6:46:39.13%:63:4.7997E-7:42:28:17:11:47 0/0:36:4:2:2:38:10.53%:37:5.7534E-2:43:34:14:20:40 0/1:40:8:4:4:40:20%:25:2.653E-3:39:32:19:13:41 0/0:47:6:4:2:37:16.22%:28:1.2549E-2:41:31:13:18:37 0/1:37:14:12:2:46:30.43%:47:1.9039E-5:41:32:19:13:48 0/1:38:17:9:8:53:32.08%:57:1.655E-6:41:36:18:18:55 0/1:37:12:9:3:38:31.58%:40:8.7276E-5:43:26:8:18:39 0/1:39:12:8:4:28:42.86%:42:5.4482E-5:43:16:9:7:29 0/0:41:6:3:3:42:14.29%:33:1.2905E-2:39:36:23:13:44 0/1:42:10:7:3:35:28.57%:33:4.6276E-4:45:25:13:12:35 0/1:37:9:5:4:37:24.32%:29:1.1256E-3:42:28:13:15:39 0/1:38:17:7:10:45:37.78%:59:1.1805E-6:42:28:14:14:47 0/1:42:15:8:7:42:35.71%:51:6.6622E-6:38:27:8:19:44 0/1:40:17:11:6:49:34.69%:58:1.4216E-6:40:32:13:19:50 0/0:35:3:2:1:23:13.04%:22:1.1667E-1:44:20:11:9:23 0/1:41:21:14:7:52:40.38%:74:3.7578E-8:40:31:21:10:55 0/1:40:13:10:3:43:30.23%:43:4.2025E-5:44:30:14:16:43 0/0:41:5:5:0:24:20.83%:14:2.4823E-2:43:19:9:10:24 0/1:39:10:8:2:49:20.41%:32:5.8675E-4:40:39:19:20:50 0/1:39:16:10:6:50:32%:54:3.6584E-6:41:34:14:20:51 0/0:45:3:3:0:34:8.82%:37:1.194E-1:43:31:20:11:35 0/0:37:6:6:0:31:19.35%:20:1.1977E-2:42:25:16:9:34 0/1:40:8:4:4:56:14.29%:25:2.9874E-3:43:48:23:25:58 0/0:37:4:4:0:34:11.76%:31:5.6946E-2:39:30:15:15:35 0/0:41:6:4:2:48:12.5%:41:1.3237E-2:44:42:19:23:50 0/1:51:8:5:3:24:33.33%:27:1.949E-3:45:16:8:8:26 0/0:37:5:4:1:25:20%:17:2.5076E-2:41:20:9:11:27 0/1:39:15:11:4:40:37.5%:52:6.0618E-6:41:25:11:14:41 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:22 0/1:39:9:7:2:22:40.91%:31:7.0165E-4:45:13:5:8:22 0/0:41:6:6:0:35:17.14%:25:1.238E-2:46:29:13:16:35 0/1:37:7:6:1:41:17.07%:22:5.9136E-3:44:34:14:20:44 0/1:36:19:10:9:49:38.78%:66:2.1763E-7:44:30:13:17:51 0/1:39:14:6:8:43:32.56%:47:1.727E-5:40:29:17:12:43 0/1:43:16:9:7:42:38.1%:55:2.607E-6:44:26:13:13:42 0/0:37:5:5:0:40:12.5%:35:2.7371E-2:42:35:19:16:43 0/1:38:9:5:4:42:21.43%:29:1.2112E-3:41:33:19:14:43 0/1:37:7:6:1:36:19.44%:22:5.6667E-3:40:29:10:19:36 0/0:37:6:4:2:56:10.71%:53:1.3571E-2:43:50:29:21:59 0/1:37:15:11:4:45:33.33%:51:7.5306E-6:39:30:15:15:46 0/0:36:4:3:1:36:11.11%:34:5.7257E-2:44:32:16:16:36 0/0:37:4:4:0:35:11.43%:35:5.7106E-2:41:31:19:12:38 0/1:37:8:5:3:44:18.18%:25:2.7573E-3:41:36:20:16:46 0/0:40:6:3:3:29:20.69%:18:1.1736E-2:46:23:13:10:32 0/1:37:7:3:4:21:33.33%:23:4.3101E-3:39:14:7:7:21 0/0:37:5:3:2:41:12.2%:38:2.7465E-2:45:36:17:19:41 0/1:42:9:5:4:28:32.14%:30:9.1169E-4:43:19:11:8:28 0/0:37:5:4:1:37:13.51%:32:2.706E-2:43:32:12:20:39 0/0:41:6:4:2:26:23.08%:13:1.1309E-2:43:20:11:9:26 0/1:38:13:8:5:54:24.07%:42:5.3813E-5:39:41:21:20:54 0/1:40:15:11:4:37:40.54%:52:5.1339E-6:41:22:9:13:39 0/1:37:20:10:10:60:33.33%:68:1.4228E-7:41:40:23:17:61 0/1:40:14:6:8:34:41.18%:49:1.1295E-5:42:20:8:12:34 0/0:37:2:1:1:28:7.14%:34:2.4545E-1:38:26:8:18:30 0/0:35:6:6:0:33:18.18%:23:1.219E-2:41:27:18:9:33 0/0:37:4:3:1:38:10.53%:37:5.7534E-2:39:34:17:17:40 0/0:37:5:2:3:47:10.64%:47:2.7945E-2:41:42:25:17:48 0/0:37:2:1:1:38:5.26%:50:2.4667E-1:41:36:16:20:38 0/0:37:4:3:1:39:10.26%:41:5.7662E-2:41:35:15:20:39 0/1:37:7:4:3:35:20%:22:5.6095E-3:37:28:20:8:36 0/0:35:6:5:1:34:17.65%:23:1.2287E-2:37:28:16:12:36 0/0:37:3:3:0:18:16.67%:14:1.1429E-1:40:15:8:7:18 0/0:37:3:3:0:41:7.32%:50:1.2037E-1:42:38:27:11:42 0/0:37:3:1:2:32:9.38%:34:1.1905E-1:43:29:15:14:32 0/0:36:4:2:2:41:9.76%:44:5.79E-2:42:37:21:16:44 0/0:37:6:4:2:29:20.69%:18:1.1736E-2:42:23:6:17:30 0/0:36:4:3:1:43:9.3%:47:5.8115E-2:42:39:16:23:48 0/0:37:2:1:1:32:6.25%:40:2.4603E-1:42:30:13:17:36 0/0:37:6:3:3:33:18.18%:23:1.219E-2:43:27:12:15:34 0/0:37:2:2:0:26:7.69%:30:2.451E-1:37:24:17:7:27 0/0:37:2:2:0:32:6.25%:40:2.4603E-1:41:30:15:15:32 0/0:45:4:2:2:40:10%:40:5.7784E-2:38:36:21:15:40 0/1:37:7:6:1:40:17.5%:22:5.8688E-3:38:33:21:12:45 0/1:34:9:5:4:45:20%:29:1.2547E-3:38:36:20:16:47 0/0:37:4:3:1:36:11.11%:34:5.7257E-2:37:32:17:15:40 0/0:36:4:2:2:26:15.38%:20:5.5222E-2:39:22:15:7:27 0/0:38:2:0:2:45:4.44%:64:2.4719E-1:39:43:28:15:49 0/0:33:4:4:0:45:8.89%:50:5.8311E-2:38:41:21:20:46 0/1:36:7:5:2:31:22.58%:22:5.3469E-3:41:24:12:12:31 0/0:36:6:2:4:29:20.69%:18:1.1736E-2:40:23:14:9:31 0/0:37:4:1:3:38:10.53%:37:5.7534E-2:38:34:19:15:42 0/0:36:5:3:2:38:13.16%:32:2.7169E-2:39:33:24:9:43 0/1:39:7:5:2:37:18.92%:22:5.721E-3:39:30:17:13:41 0/0:37:3:2:1:39:7.69%:47:1.2013E-1:37:36:17:19:42 0/0:36:5:4:1:31:16.13%:24:2.6257E-2:38:26:12:14:34 0/0:37:2:2:0:27:7.41%:34:2.4528E-1:38:25:10:15:30 0/0:34:4:3:1:29:13.79%:26:5.5981E-2:40:25:11:14:31 0/0:37:1:1:0:20:5%:27:5E-1:36:19:11:8:24 0/0:33:3:2:1:27:11.11%:28:1.1792E-1:40:24:12:12:27 0/0:33:1:1:0:23:4.35%:34:5E-1:37:22:14:8:23 0/0:37:2:1:1:40:5%:53:2.4684E-1:38:38:24:14:42 0/0:0:0:0:0:19:0%:37:1E0:37:19:12:7:19 0/0:37:6:4:2:39:15.38%:31:1.2702E-2:39:33:19:14:41 0/1:37:19:13:6:62:30.65%:64:3.74E-7:38:43:25:18:65 0/1:37:12:7:5:53:22.64%:39:1.2122E-4:38:41:22:19:54 0/1:38:17:9:8:43:39.53%:59:1.0581E-6:42:26:14:12:48 0/0:42:5:3:2:42:11.9%:38:2.7555E-2:38:37:23:14:42 0/0:37:2:0:2:34:5.88%:43:2.4627E-1:39:32:17:15:36 0/0:37:2:1:1:20:10%:21:2.4359E-1:41:18:10:8:22 0/0:36:3:2:1:35:8.57%:40:1.1957E-1:42:32:14:18:40 0/0:37:5:5:0:39:12.82%:35:2.7273E-2:40:34:21:13:43 0/0:38:2:0:2:31:6.45%:40:2.459E-1:39:29:17:12:34 0/0:37:3:2:1:27:11.11%:28:1.1792E-1:39:24:12:12:28 0/0:45:3:2:1:38:7.89%:43:1.2E-1:42:35:17:18:39 0/0:37:5:2:3:52:9.62%:52:2.8261E-2:42:47:23:24:55 0/1:38:19:16:3:61:31.15%:64:3.6228E-7:39:42:27:15:64 0/1:38:12:7:5:31:38.71%:41:6.5329E-5:36:19:10:9:34 MTB_anc 1634581 . A G . PASS AC=66;AF=0.220;AN=300;ANN=G|missense_variant|MODERATE|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.47T>C|p.Leu16Ser|47/3990|47/3990|16/1329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1634581A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1634581A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:9:7:2:57:15.79%:28:1.388E-3:43:48:26:22:57 0/1:42:8:6:2:22:36.36%:27:1.8042E-3:46:14:4:10:22 0/1:37:9:8:1:46:19.57%:28:1.2682E-3:46:37:20:17:47 0/1:43:7:3:4:35:20%:22:5.6095E-3:45:28:11:17:38 0/0:35:2:1:1:30:6.67%:37:2.4576E-1:40:28:14:14:31 0/0:36:2:2:0:32:6.25%:40:2.4603E-1:43:30:12:18:33 0/1:37:13:8:5:44:29.55%:43:4.324E-5:49:31:11:20:45 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/1:41:10:7:3:36:28.57%:33:4.6276E-4:40:25:16:9:36 0/1:40:14:9:5:45:31.11%:47:1.8462E-5:42:31:17:14:47 0/1:38:7:7:0:31:22.58%:22:5.3469E-3:41:24:13:11:31 0/1:43:12:8:4:47:25.53%:39:1.0942E-4:40:35:20:15:48 0/1:42:8:7:1:25:32%:26:2.0146E-3:47:17:8:9:25 0/1:37:18:14:4:55:32.73%:61:7.2242E-7:41:37:19:18:55 0/1:36:7:4:3:28:25%:22:5.1054E-3:43:21:8:13:28 0/0:43:6:5:1:28:21.43%:16:1.1603E-2:40:22:14:8:29 0/0:36:6:5:1:35:17.14%:25:1.238E-2:43:29:15:14:35 0/1:35:8:6:2:31:25.81%:26:2.3332E-3:44:23:9:14:32 0/0:38:2:1:1:16:12.5%:15:2.4194E-1:41:14:7:7:16 0/0:37:3:2:1:26:11.54%:25:1.1765E-1:39:23:12:11:28 0/0:37:2:2:0:37:5.41%:50:2.4658E-1:40:35:21:14:39 0/1:37:19:12:7:54:35.19%:65:2.7841E-7:39:35:18:17:54 0/1:41:8:3:5:34:23.53%:26:2.4562E-3:44:26:14:12:34 0/1:39:10:7:3:53:18.87%:32:6.0611E-4:41:42:24:18:55 0/1:37:8:6:2:46:17.39%:25:2.8033E-3:42:38:20:18:46 0/0:35:1:1:0:25:4%:38:5E-1:43:24:10:14:26 0/1:38:8:5:3:29:27.59%:26:2.2392E-3:38:21:12:9:29 0/0:38:6:5:1:26:23.08%:13:1.1309E-2:41:20:11:9:26 0/1:37:10:4:6:29:34.48%:34:3.8387E-4:41:19:11:8:29 0/0:35:2:2:0:33:6.06%:44:2.4615E-1:43:31:16:15:33 0/1:37:21:11:10:53:39.62%:73:3.9927E-8:42:32:16:16:54 0/0:38:6:2:4:43:13.95%:36:1.2967E-2:40:37:24:13:43 0/0:39:2:0:2:22:9.09%:24:2.4419E-1:47:20:13:7:22 0/1:37:7:4:3:23:30.43%:23:4.5803E-3:38:16:6:10:24 0/0:40:6:4:2:40:15%:30:1.2773E-2:44:34:14:20:40 0/1:37:11:6:5:34:32.35%:37:1.8662E-4:41:23:9:14:35 0/1:39:18:8:10:52:34.62%:61:6.4267E-7:42:34:17:17:52 0/1:40:26:16:10:71:36.62%:90:8.9502E-10:47:45:29:16:72 0/0:37:2:2:0:42:4.76%:57:2.4699E-1:41:40:21:19:42 0/1:37:9:4:5:48:18.75%:28:1.2935E-3:43:39:18:21:48 0/0:36:3:2:1:42:7.14%:49:1.2048E-1:41:39:15:24:42 0/1:44:7:4:3:48:14.58%:22:6.1774E-3:42:41:23:18:51 0/1:37:7:5:2:30:23.33%:22:5.2713E-3:41:23:11:12:31 0/1:37:18:12:6:45:40%:63:4.5278E-7:43:27:16:11:47 0/0:37:5:2:3:39:12.82%:35:2.7273E-2:42:34:14:20:40 0/1:39:8:4:4:40:20%:25:2.653E-3:40:32:18:14:41 0/0:46:6:4:2:37:16.22%:28:1.2549E-2:42:31:13:18:37 0/1:36:13:11:2:47:27.66%:43:4.6702E-5:42:34:20:14:47 0/1:38:16:8:8:53:30.19%:53:4.0256E-6:42:37:17:20:55 0/1:37:12:9:3:39:30.77%:40:9.0046E-5:43:27:8:19:39 0/1:39:11:7:4:29:37.93%:38:1.4422E-4:43:17:9:8:29 0/0:41:6:3:3:44:13.64%:36:1.3026E-2:39:38:25:13:44 0/1:42:9:6:3:34:26.47%:29:1.0644E-3:46:25:13:12:34 0/1:36:9:5:4:38:23.68%:29:1.1442E-3:42:29:12:17:39 0/1:38:17:7:10:46:36.96%:59:1.2413E-6:43:29:15:14:47 0/1:41:15:8:7:43:34.88%:51:6.9561E-6:39:28:8:20:43 0/1:40:17:11:6:48:35.42%:58:1.3619E-6:41:31:13:18:49 0/0:37:3:2:1:23:13.04%:22:1.1667E-1:44:20:11:9:24 0/1:41:20:13:7:52:38.46%:70:9.8643E-8:42:32:21:11:55 0/1:40:13:10:3:42:30.95%:43:4.0777E-5:45:29:14:15:42 0/0:41:5:5:0:23:21.74%:14:2.4548E-2:43:18:9:9:23 0/1:37:8:6:2:48:16.67%:25:2.8457E-3:41:40:20:20:48 0/1:39:15:10:5:50:30%:50:8.8847E-6:41:35:14:21:51 0/0:42:3:3:0:34:8.82%:37:1.194E-1:43:31:19:12:35 0/0:36:5:5:0:33:15.15%:27:2.6557E-2:42:28:17:11:34 0/1:41:7:3:4:57:12.28%:21:6.4254E-3:43:50:24:26:58 0/0:36:4:4:0:35:11.43%:35:5.7106E-2:39:31:16:15:36 0/0:42:5:3:2:48:10.42%:46:2.8014E-2:45:43:19:24:49 0/0:52:6:3:3:24:25%:11:1.0968E-2:44:18:9:9:26 0/0:37:4:3:1:27:14.81%:20:5.5222E-2:41:22:10:12:27 0/1:38:15:11:4:40:37.5%:52:6.0618E-6:41:25:10:15:41 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:22 0/1:39:9:7:2:22:40.91%:31:7.0165E-4:46:13:5:8:22 0/0:40:6:6:0:35:17.14%:25:1.238E-2:46:29:13:16:35 0/1:36:7:6:1:44:15.91%:22:6.0363E-3:45:37:14:23:44 0/1:36:18:9:9:49:36.73%:62:5.6162E-7:44:31:14:17:50 0/1:38:14:6:8:45:31.11%:47:1.8462E-5:41:31:17:14:45 0/1:41:15:8:7:42:35.71%:51:6.6622E-6:46:27:14:13:42 0/0:34:5:5:0:43:11.63%:41:2.764E-2:43:38:20:18:44 0/1:38:9:5:4:43:20.93%:29:1.2263E-3:42:34:19:15:43 0/1:37:7:6:1:36:19.44%:22:5.6667E-3:42:29:10:19:36 0/0:37:6:4:2:59:10.17%:59:1.3674E-2:43:53:29:24:59 0/1:37:15:11:4:46:32.61%:51:7.8109E-6:39:31:15:16:46 0/0:37:4:3:1:36:11.11%:34:5.7257E-2:44:32:17:15:36 0/0:34:4:4:0:37:10.81%:38:5.7399E-2:41:33:20:13:37 0/1:36:8:5:3:44:18.18%:25:2.7573E-3:42:36:19:17:45 0/0:41:6:3:3:32:18.75%:20:1.2087E-2:46:26:13:13:32 0/1:37:7:3:4:21:33.33%:23:4.3101E-3:41:14:7:7:21 0/0:37:5:3:2:41:12.2%:38:2.7465E-2:46:36:17:19:41 0/1:42:9:5:4:28:32.14%:30:8.8132E-4:43:18:11:7:28 0/0:36:5:4:1:38:13.16%:32:2.7169E-2:44:33:11:22:39 0/0:41:6:4:2:26:23.08%:13:1.1309E-2:45:20:11:9:26 0/1:38:13:8:5:54:24.07%:42:5.3813E-5:39:41:21:20:54 0/1:40:14:10:4:39:35.9%:48:1.4735E-5:42:25:9:16:40 0/1:38:17:8:9:59:28.81%:57:1.9861E-6:41:42:24:18:59 0/1:41:13:6:7:33:39.39%:45:2.8029E-5:42:20:8:12:33 0/0:37:2:1:1:28:7.14%:34:2.4545E-1:40:26:7:19:30 0/0:36:5:5:0:30:16.67%:21:2.6093E-2:42:25:17:8:31 0/0:36:3:2:1:39:7.69%:47:1.2013E-1:38:36:18:18:40 0/0:36:5:2:3:48:10.42%:46:2.8014E-2:41:43:25:18:48 0/0:39:1:0:1:38:2.63%:58:5E-1:41:37:16:21:39 0/0:30:4:3:1:38:10.53%:37:5.7534E-2:41:34:14:20:39 0/1:37:7:4:3:36:19.44%:22:5.6667E-3:38:29:20:9:36 0/0:36:6:5:1:35:17.14%:25:1.238E-2:37:29:16:13:35 0/0:38:3:3:0:18:16.67%:14:1.1429E-1:41:15:8:7:18 0/0:37:3:3:0:39:7.69%:47:1.2013E-1:42:36:25:11:41 0/0:39:2:0:2:32:6.25%:40:2.4603E-1:43:30:16:14:32 0/0:34:3:1:2:42:7.14%:49:1.2048E-1:42:39:21:18:43 0/0:37:4:2:2:29:13.79%:26:5.5981E-2:41:25:7:18:31 0/0:37:3:2:1:46:6.52%:56:1.2088E-1:43:43:16:27:47 0/0:38:2:1:1:36:5.56%:47:2.4648E-1:41:34:14:20:36 0/0:36:5:2:3:33:15.15%:27:2.6557E-2:42:28:13:15:33 0/0:38:2:2:0:23:8.7%:28:2.4444E-1:38:21:15:6:26 0/0:37:2:2:0:32:6.25%:40:2.4603E-1:41:30:15:15:32 0/0:53:3:1:2:37:8.11%:43:1.1986E-1:40:34:21:13:40 0/0:35:6:5:1:42:14.29%:33:1.2905E-2:38:36:23:13:45 0/1:37:7:4:3:45:15.56%:22:6.0738E-3:39:38:21:17:46 0/0:35:4:3:1:38:10.53%:37:5.7534E-2:38:34:16:18:40 0/0:38:3:2:1:24:12.5%:22:1.1702E-1:40:21:14:7:26 0/0:39:2:0:2:50:4%:70:2.4747E-1:40:48:29:19:50 0/0:34:3:3:0:45:6.67%:56:1.2079E-1:39:42:21:21:46 0/0:37:6:4:2:30:20%:18:1.186E-2:40:24:12:12:30 0/0:37:5:1:4:31:16.13%:24:2.6257E-2:39:26:15:11:32 0/0:38:4:1:3:41:9.76%:44:5.79E-2:39:37:20:17:42 0/0:34:2:1:1:40:5%:53:2.4684E-1:38:38:25:13:43 0/0:41:5:4:1:38:13.16%:32:2.7169E-2:39:33:18:15:38 0/0:37:3:2:1:41:7.32%:50:1.2037E-1:37:38:17:21:42 0/0:33:5:4:1:33:15.15%:27:2.6557E-2:38:28:14:14:34 0/0:37:2:2:0:28:7.14%:34:2.4545E-1:38:26:10:16:30 0/0:36:4:3:1:31:12.9%:29:5.6405E-2:39:27:12:15:31 0/0:30:1:1:0:23:4.35%:34:5E-1:37:22:10:12:23 0/0:38:2:1:1:25:8%:31:2.449E-1:41:23:11:12:27 0/0:27:1:1:0:21:4.76%:31:5E-1:37:20:13:7:23 0/0:38:2:1:1:43:4.65%:60:2.4706E-1:39:41:25:16:43 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:19 0/0:36:6:4:2:41:14.63%:33:1.2841E-2:40:35:19:16:41 0/1:37:18:12:6:63:28.57%:60:9.255E-7:38:45:25:20:64 0/1:37:12:7:5:55:21.82%:39:1.2473E-4:39:43:22:21:55 0/1:37:18:10:8:48:37.5%:62:5.3443E-7:41:30:16:14:48 0/0:36:5:3:2:42:11.9%:38:2.7555E-2:39:37:23:14:42 0/0:38:2:0:2:35:5.71%:47:2.4638E-1:40:33:18:15:36 0/0:38:2:1:1:22:9.09%:24:2.4419E-1:41:20:10:10:22 0/0:37:3:2:1:40:7.5%:46:1.2025E-1:41:37:15:22:40 0/0:37:5:5:0:42:11.9%:38:2.7555E-2:40:37:22:15:43 0/0:39:2:0:2:34:5.88%:43:2.4627E-1:40:32:17:15:34 0/0:38:3:2:1:28:10.71%:28:1.1818E-1:39:25:13:12:28 0/0:44:3:2:1:39:7.69%:47:1.2013E-1:44:36:17:19:39 0/0:36:4:1:3:52:7.69%:59:5.8877E-2:43:48:21:27:54 0/1:36:16:13:3:59:27.12%:53:4.7113E-6:39:43:26:17:63 0/1:38:11:6:5:34:32.35%:37:1.8662E-4:36:23:11:12:35 MTB_anc 1634586 . T C . PASS AC=65;AF=0.217;AN=300;ANN=C|synonymous_variant|LOW|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.42A>G|p.Ala14Ala|42/3990|42/3990|14/1329||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1634586T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1634586T>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:9:7:2:56:16.07%:28:1.3788E-3:41:47:24:23:58 0/1:42:8:6:2:19:42.11%:28:1.5455E-3:49:11:4:7:21 0/1:34:8:7:1:43:18.6%:25:2.7329E-3:45:35:20:15:46 0/1:41:8:4:4:37:21.62%:25:2.5617E-3:44:29:13:16:38 0/0:35:2:1:1:28:7.14%:34:2.4545E-1:38:26:15:11:31 0/0:37:2:2:0:31:6.45%:40:2.459E-1:43:29:11:18:33 0/1:37:13:8:5:45:28.89%:43:4.4424E-5:49:32:10:22:45 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/1:40:10:7:3:34:29.41%:33:4.51E-4:38:24:17:7:35 0/1:42:14:9:5:46:30.43%:47:1.9039E-5:42:32:19:13:47 0/0:38:6:6:0:27:22.22%:16:1.1461E-2:42:21:11:10:30 0/1:40:12:8:4:46:26.09%:39:1.0724E-4:40:34:20:14:48 0/1:40:8:7:1:25:32%:26:2.0146E-3:46:17:8:9:25 0/1:37:18:14:4:54:33.33%:61:6.9602E-7:40:36:18:18:55 0/1:36:7:4:3:29:24.14%:22:5.1909E-3:42:22:8:14:29 0/0:44:6:5:1:27:22.22%:16:1.1461E-2:39:21:14:7:28 0/0:36:6:5:1:33:18.18%:23:1.219E-2:41:27:15:12:34 0/1:35:8:6:2:31:25.81%:26:2.3332E-3:41:23:10:13:32 0/0:37:2:1:1:15:13.33%:16:2.4138E-1:42:13:7:6:16 0/0:35:4:3:1:25:16%:21:5.4928E-2:39:21:11:10:28 0/0:37:1:1:0:38:2.63%:58:5E-1:40:37:22:15:40 0/1:38:18:11:7:50:36%:62:5.8874E-7:38:32:18:14:54 0/1:40:8:3:5:31:25.81%:26:2.3332E-3:45:23:12:11:31 0/1:39:12:8:4:53:22.64%:39:1.2122E-4:40:41:26:15:56 0/1:37:7:5:2:45:15.56%:22:6.0738E-3:41:38:20:18:46 0/0:36:1:1:0:24:4.17%:34:5E-1:41:23:11:12:25 0/1:37:8:5:3:28:28.57%:26:2.188E-3:37:20:12:8:28 0/0:36:6:5:1:25:24%:14:1.1145E-2:38:19:10:9:25 0/1:36:10:4:6:29:34.48%:34:3.8387E-4:38:19:11:8:29 0/0:36:2:2:0:30:6.67%:37:2.4576E-1:43:28:15:13:31 0/1:37:20:11:9:51:39.22%:70:9.3266E-8:41:31:15:16:53 0/0:36:6:2:4:42:14.29%:33:1.2905E-2:40:36:24:12:43 0/0:38:2:0:2:22:9.09%:24:2.4419E-1:44:20:13:7:22 0/1:37:7:4:3:23:30.43%:23:4.5803E-3:40:16:7:9:23 0/0:38:6:4:2:38:15.79%:28:1.2628E-2:46:32:12:20:38 0/1:37:11:6:5:37:29.73%:36:2.0455E-4:38:26:10:16:37 0/1:38:18:8:10:52:34.62%:61:6.4267E-7:40:34:19:15:53 0/1:40:26:17:9:67:38.81%:91:7.2464E-10:45:41:27:14:70 0/0:37:2:2:0:41:4.88%:57:2.4691E-1:40:39:21:18:42 0/1:35:9:4:5:44:20.45%:29:1.2408E-3:43:35:16:19:47 0/0:35:2:1:1:40:5%:53:2.4684E-1:40:38:15:23:42 0/1:42:7:4:3:51:13.73%:22:6.2693E-3:41:44:26:18:52 0/1:37:8:6:2:30:26.67%:26:2.2875E-3:40:22:10:12:30 0/1:39:17:12:5:45:37.78%:59:1.1805E-6:41:28:17:11:46 0/0:35:5:2:3:37:13.51%:32:2.706E-2:42:32:14:18:39 0/1:39:8:4:4:41:19.51%:25:2.6808E-3:39:33:19:14:41 0/0:44:6:4:2:34:17.65%:23:1.2287E-2:41:28:12:16:36 0/1:37:13:11:2:46:28.26%:43:4.5578E-5:41:33:20:13:46 0/1:37:16:8:8:56:28.57%:53:4.3766E-6:41:40:19:21:56 0/1:36:13:9:4:39:33.33%:44:3.6837E-5:42:26:9:17:40 0/1:38:12:8:4:28:42.86%:42:5.4482E-5:42:16:9:7:29 0/0:40:6:3:3:42:14.29%:33:1.2905E-2:38:36:24:12:43 0/1:43:8:5:3:33:24.24%:26:2.4173E-3:46:25:13:12:33 0/1:37:9:5:4:36:25%:29:1.1061E-3:42:27:13:14:38 0/1:37:17:7:10:47:36.17%:58:1.3018E-6:42:30:15:15:47 0/1:39:14:8:6:37:37.84%:48:1.3393E-5:38:23:6:17:39 0/1:38:15:9:6:47:31.91%:50:8.0864E-6:40:32:13:19:49 0/0:35:3:2:1:22:13.64%:19:1.1628E-1:45:19:11:8:24 0/1:41:20:14:6:52:38.46%:70:9.8643E-8:41:32:21:11:54 0/1:40:13:10:3:43:30.23%:43:4.2025E-5:44:30:16:14:43 0/0:43:4:4:0:23:17.39%:18:5.4264E-2:44:19:9:10:23 0/1:40:7:5:2:44:15.91%:22:6.0363E-3:40:37:18:19:45 0/1:40:14:9:5:48:29.17%:46:2.0156E-5:40:34:14:20:50 0/0:37:3:3:0:34:8.82%:37:1.194E-1:42:31:21:10:36 0/0:36:6:6:0:33:18.18%:23:1.219E-2:41:27:16:11:36 0/1:40:8:4:4:52:15.38%:25:2.9216E-3:44:44:23:21:55 0/0:37:3:3:0:32:9.38%:34:1.1905E-1:39:29:16:13:34 0/0:40:6:4:2:47:12.77%:42:1.3188E-2:44:41:18:23:48 0/1:50:7:4:3:23:30.43%:23:4.5803E-3:43:16:8:8:26 0/0:37:5:4:1:25:20%:17:2.5076E-2:41:20:10:10:26 0/1:38:15:11:4:42:35.71%:51:6.6622E-6:40:27:11:16:42 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:23 0/1:39:9:7:2:23:39.13%:31:7.4174E-4:46:14:5:9:23 0/0:41:6:6:0:34:17.65%:23:1.2287E-2:43:28:13:15:35 0/0:36:6:5:1:42:14.29%:33:1.2905E-2:42:36:14:22:44 0/1:36:17:9:8:46:36.96%:59:1.2413E-6:44:29:11:18:48 0/1:38:14:6:8:44:31.82%:47:1.7873E-5:40:30:17:13:45 0/1:41:15:9:6:40:37.5%:52:6.0618E-6:46:25:12:13:40 0/0:34:5:5:0:40:12.5%:35:2.7371E-2:42:35:18:17:41 0/1:41:9:5:4:42:21.43%:29:1.2112E-3:41:33:18:15:42 0/1:37:7:6:1:32:21.88%:22:5.4182E-3:40:25:10:15:35 0/0:36:6:4:2:56:10.71%:53:1.3571E-2:42:50:27:23:58 0/1:37:15:11:4:45:33.33%:51:7.5306E-6:39:30:15:15:46 0/0:37:4:3:1:34:11.76%:31:5.6946E-2:45:30:17:13:35 0/0:36:4:4:0:35:11.43%:35:5.7106E-2:41:31:19:12:37 0/0:36:6:3:3:39:15.38%:31:1.2702E-2:42:33:18:15:42 0/0:42:5:2:3:28:17.86%:19:2.5729E-2:46:23:12:11:31 0/1:37:7:3:4:21:33.33%:23:4.3101E-3:40:14:7:7:21 0/0:36:5:3:2:42:11.9%:38:2.7555E-2:45:37:17:20:42 0/1:42:9:5:4:29:31.03%:30:9.4048E-4:42:20:11:9:29 0/0:35:5:4:1:35:14.29%:30:2.6822E-2:44:30:12:18:38 0/0:40:6:4:2:28:21.43%:16:1.1603E-2:45:22:11:11:28 0/1:38:12:8:4:53:22.64%:39:1.2122E-4:39:41:21:20:53 0/1:38:15:11:4:39:38.46%:52:5.7558E-6:39:24:9:15:40 0/1:37:17:8:9:60:28.33%:56:2.0389E-6:40:43:24:19:60 0/1:38:13:6:7:32:40.62%:45:2.6443E-5:42:19:8:11:32 0/0:37:2:1:1:29:6.9%:37:2.4561E-1:37:27:8:19:29 0/0:37:5:5:0:30:16.67%:21:2.6093E-2:43:25:18:7:31 0/0:36:4:3:1:37:10.81%:38:5.7399E-2:38:33:17:16:38 0/0:37:4:1:3:48:8.33%:52:5.8574E-2:40:44:26:18:49 0/0:37:2:1:1:37:5.41%:50:2.4658E-1:42:35:15:20:38 0/0:36:4:3:1:38:10.53%:37:5.7534E-2:40:34:15:19:38 0/1:37:7:4:3:31:22.58%:22:5.3469E-3:38:24:18:6:35 0/0:36:6:5:1:34:17.65%:23:1.2287E-2:37:28:16:12:35 0/0:37:3:3:0:16:18.75%:11:1.129E-1:41:13:7:6:18 0/0:36:3:3:0:37:8.11%:43:1.1986E-1:41:34:23:11:39 0/0:38:2:0:2:30:6.67%:37:2.4576E-1:42:28:15:13:30 0/0:35:2:1:1:40:5%:53:2.4684E-1:42:38:21:17:43 0/0:36:6:4:2:31:19.35%:20:1.1977E-2:40:25:7:18:32 0/0:35:3:2:1:47:6.38%:59:1.2097E-1:39:44:17:27:48 0/0:37:2:1:1:37:5.41%:50:2.4658E-1:40:35:15:20:40 0/0:37:5:2:3:33:15.15%:27:2.6557E-2:41:28:14:14:34 0/0:33:2:2:0:25:8%:31:2.449E-1:36:23:17:6:25 0/0:37:2:2:0:30:6.67%:37:2.4576E-1:40:28:14:14:31 0/0:44:3:1:2:39:7.69%:47:1.2013E-1:39:36:22:14:41 0/1:36:8:7:1:42:19.05%:25:2.7074E-3:37:34:24:10:45 0/1:33:7:5:2:44:15.91%:22:6.0363E-3:37:37:21:16:45 0/0:37:4:3:1:38:10.53%:37:5.7534E-2:38:34:17:17:39 0/0:37:3:2:1:23:13.04%:22:1.1667E-1:39:20:14:6:24 0/0:37:2:0:2:49:4.08%:71:2.4742E-1:38:47:29:18:53 0/0:36:4:4:0:40:10%:40:5.7784E-2:38:36:17:19:42 0/0:37:6:4:2:29:20.69%:18:1.1736E-2:40:23:12:11:30 0/0:36:5:2:3:31:16.13%:24:2.6257E-2:37:26:16:10:32 0/0:35:4:1:3:40:10%:40:5.7784E-2:37:36:21:15:41 0/0:35:3:2:1:38:7.89%:43:1.2E-1:37:35:22:13:40 0/0:41:5:4:1:36:13.89%:29:2.6944E-2:38:31:18:13:38 0/0:37:2:1:1:36:5.56%:47:2.4648E-1:36:34:17:17:40 0/0:35:5:4:1:30:16.67%:21:2.6093E-2:39:25:13:12:33 0/0:37:2:2:0:29:6.9%:37:2.4561E-1:38:27:10:17:31 0/0:36:4:3:1:32:12.5%:29:5.6596E-2:38:28:13:15:32 0/0:36:1:1:0:18:5.56%:24:5E-1:35:17:9:8:21 0/0:37:3:2:1:26:11.54%:25:1.1765E-1:40:23:12:11:27 0/0:38:1:1:0:23:4.35%:34:5E-1:37:22:14:8:23 0/0:37:2:1:1:41:4.88%:57:2.4691E-1:38:39:24:15:41 0/0:0:0:0:0:19:0%:37:1E0:36:19:13:6:21 0/0:37:5:3:2:37:13.51%:32:2.706E-2:39:32:18:14:39 0/1:36:18:12:6:59:30.51%:60:8.2591E-7:38:41:24:17:62 0/1:36:12:7:5:54:22.22%:39:1.23E-4:39:42:23:19:55 0/1:37:18:10:8:46:39.13%:63:4.7997E-7:41:28:15:13:48 0/0:35:5:3:2:40:12.5%:35:2.7371E-2:38:35:21:14:41 0/0:34:2:0:2:33:6.06%:44:2.4615E-1:41:31:16:15:34 0/0:33:2:1:1:22:9.09%:24:2.4419E-1:40:20:10:10:22 0/0:33:3:2:1:41:7.32%:50:1.2037E-1:40:38:15:23:41 0/0:36:5:5:0:39:12.82%:35:2.7273E-2:40:34:22:12:40 0/0:38:2:0:2:33:6.06%:44:2.4615E-1:38:31:16:15:34 0/0:37:3:2:1:29:10.34%:31:1.1842E-1:39:26:13:13:30 0/0:45:3:2:1:39:7.69%:47:1.2013E-1:42:36:17:19:39 0/0:37:4:1:3:53:7.55%:62:5.8946E-2:41:49:23:26:55 0/1:37:17:14:3:58:29.31%:57:1.9326E-6:39:41:26:15:62 0/1:38:12:7:5:35:34.29%:41:7.8434E-5:35:23:13:10:37 MTB_anc 1634589 . G C . PASS AC=67;AF=0.223;AN=300;ANN=C|synonymous_variant|LOW|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.39C>G|p.Ala13Ala|39/3990|39/3990|13/1329||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1634589G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1634589G>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:9:7:2:55:16.36%:28:1.3694E-3:41:46:22:24:56 0/1:41:8:6:2:21:38.1%:27:1.7241E-3:47:13:4:9:21 0/1:35:8:7:1:48:16.67%:25:2.8457E-3:45:40:22:18:48 0/1:37:8:4:4:35:22.86%:26:2.4931E-3:45:27:12:15:36 0/0:32:2:1:1:30:6.67%:37:2.4576E-1:40:28:13:15:30 0/0:35:2:2:0:32:6.25%:40:2.4603E-1:42:30:12:18:32 0/1:36:13:8:5:42:30.95%:43:4.0777E-5:51:29:9:20:43 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/1:41:9:6:3:33:27.27%:29:1.042E-3:37:24:16:8:35 0/1:41:14:9:5:45:31.11%:47:1.8462E-5:41:31:17:14:46 0/0:39:6:6:0:29:20.69%:16:1.1603E-2:41:22:12:10:30 0/1:40:11:7:4:45:24.44%:36:2.4398E-4:40:34:20:14:47 0/1:39:8:7:1:25:32%:26:2.0146E-3:47:17:8:9:25 0/1:37:18:14:4:56:32.14%:61:7.4863E-7:42:38:18:20:56 0/1:35:7:4:3:29:24.14%:22:5.1909E-3:41:22:8:14:29 0/0:43:6:5:1:28:21.43%:16:1.1603E-2:39:22:14:8:28 0/0:36:5:5:0:33:15.15%:27:2.6557E-2:42:28:14:14:35 0/1:34:8:6:2:30:26.67%:26:2.2875E-3:44:22:8:14:31 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:40:15:7:8:17 0/0:33:4:3:1:27:14.81%:23:5.5494E-2:39:23:11:12:27 0/0:37:1:1:0:38:2.63%:58:5E-1:38:37:21:16:38 0/1:37:19:12:7:54:35.19%:65:2.7841E-7:38:35:18:17:54 0/1:40:8:3:5:31:25.81%:26:2.3332E-3:45:23:12:11:31 0/1:38:12:8:4:54:22.22%:39:1.23E-4:42:42:25:17:56 0/1:36:7:5:2:44:15.91%:22:6.0363E-3:42:37:19:18:44 0/0:26:1:1:0:25:4%:38:5E-1:40:24:11:13:25 0/1:37:8:5:3:28:28.57%:26:2.188E-3:36:20:12:8:28 0/0:37:6:5:1:25:24%:14:1.1145E-2:38:19:10:9:25 0/1:36:10:4:6:30:33.33%:33:3.9851E-4:39:20:11:9:30 0/0:29:1:1:0:30:3.33%:44:5E-1:43:29:15:14:31 0/1:37:19:10:9:50:38%:66:2.2975E-7:41:31:15:16:53 0/0:37:6:2:4:43:13.95%:33:1.2905E-2:39:36:24:12:44 0/0:38:2:0:2:22:9.09%:24:2.4419E-1:47:20:13:7:22 0/1:33:7:4:3:24:29.17%:23:4.7006E-3:38:17:7:10:24 0/0:40:6:4:2:38:15.79%:28:1.2628E-2:45:32:12:20:38 0/1:37:11:6:5:36:30.56%:37:1.9879E-4:38:25:10:15:37 0/1:37:18:8:10:53:33.96%:61:6.6943E-7:41:35:19:16:53 0/1:39:25:16:9:68:36.76%:87:1.9778E-9:45:43:27:16:70 0/0:37:2:2:0:41:4.88%:57:2.4691E-1:41:39:20:19:43 0/1:36:9:4:5:47:19.15%:28:1.2811E-3:44:38:16:22:47 0/0:27:2:2:0:40:5%:53:2.4684E-1:39:38:14:24:41 0/1:44:7:4:3:50:14%:22:6.2092E-3:41:42:22:20:52 0/1:36:8:6:2:31:25.81%:26:2.3332E-3:39:23:10:13:31 0/1:39:16:11:5:42:38.1%:55:2.607E-6:43:26:15:11:45 0/0:36:5:2:3:37:13.51%:32:2.706E-2:42:32:14:18:37 0/1:39:8:4:4:42:19.05%:25:2.7074E-3:39:34:18:16:42 0/0:43:6:4:2:36:16.67%:25:1.2467E-2:41:30:12:18:36 0/1:37:13:11:2:45:28.89%:43:4.4424E-5:41:32:19:13:46 0/1:38:16:8:8:56:28.57%:53:4.2614E-6:41:39:18:21:56 0/1:37:11:8:3:37:29.73%:36:2.0455E-4:42:26:8:18:38 0/1:38:12:8:4:29:41.38%:42:5.8193E-5:42:17:9:8:29 0/0:40:6:3:3:41:14.63%:33:1.2841E-2:38:35:22:13:44 0/1:40:8:5:3:33:24.24%:26:2.4173E-3:45:25:13:12:33 0/1:36:9:5:4:38:23.68%:29:1.1442E-3:42:29:13:16:39 0/1:38:17:7:10:47:36.17%:58:1.3018E-6:42:30:15:15:47 0/1:39:14:8:6:39:35.9%:48:1.4735E-5:38:25:6:19:40 0/1:39:16:10:6:48:33.33%:54:3.4048E-6:39:32:12:20:50 0/0:35:3:2:1:24:12.5%:22:1.1702E-1:43:21:12:9:24 0/1:40:21:14:7:53:39.62%:73:3.9927E-8:41:32:20:12:55 0/1:40:13:10:3:43:30.23%:43:4.2025E-5:43:30:16:14:43 0/0:43:4:4:0:23:17.39%:18:5.4264E-2:44:19:9:10:23 0/1:39:7:5:2:47:14.89%:22:6.1442E-3:39:40:18:22:47 0/1:39:15:10:5:50:30%:50:8.8847E-6:40:35:14:21:50 0/0:34:3:3:0:38:7.89%:43:1.2E-1:41:35:22:13:38 0/0:34:6:6:0:36:16.67%:25:1.2467E-2:40:30:16:14:37 0/1:38:8:4:4:55:14.55%:25:2.9718E-3:44:47:22:25:55 0/0:37:3:3:0:34:8.82%:37:1.194E-1:39:31:17:14:34 0/0:39:6:4:2:47:12.77%:42:1.3188E-2:44:41:17:24:48 0/1:47:8:4:4:26:30.77%:26:2.076E-3:41:18:8:10:26 0/0:37:5:4:1:26:19.23%:17:2.531E-2:39:21:10:11:26 0/1:38:15:11:4:44:34.09%:51:7.2456E-6:40:29:11:18:44 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/1:37:9:7:2:23:39.13%:31:7.4174E-4:43:14:5:9:23 0/0:41:6:6:0:34:17.65%:23:1.2287E-2:44:28:12:16:35 0/1:36:7:6:1:42:16.67%:22:5.9563E-3:43:35:13:22:42 0/1:35:17:9:8:46:36.96%:59:1.2413E-6:45:29:11:18:46 0/1:38:14:6:8:42:33.33%:47:1.6656E-5:40:28:16:12:42 0/1:41:15:9:6:39:38.46%:52:5.7558E-6:47:24:12:12:39 0/0:35:5:5:0:39:12.82%:35:2.7273E-2:43:34:18:16:40 0/1:41:9:5:4:43:20.93%:29:1.2263E-3:42:34:19:15:43 0/1:37:7:6:1:36:19.44%:22:5.6667E-3:41:29:10:19:37 0/0:36:6:4:2:57:10.53%:56:1.3607E-2:42:51:26:25:58 0/1:37:15:11:4:45:33.33%:51:7.5306E-6:38:30:16:14:46 0/0:33:4:3:1:34:11.76%:31:5.6946E-2:46:30:16:14:34 0/0:34:4:4:0:36:11.11%:34:5.7257E-2:40:32:19:13:36 0/1:33:7:4:3:42:16.67%:22:5.9563E-3:40:35:17:18:42 0/0:41:5:2:3:32:15.62%:24:2.6412E-2:46:27:12:15:33 0/1:37:7:3:4:21:33.33%:23:4.3101E-3:42:14:7:7:21 0/0:35:4:2:2:41:9.76%:44:5.79E-2:44:37:17:20:42 0/1:42:9:5:4:28:32.14%:30:9.1169E-4:43:19:10:9:28 0/0:37:5:4:1:37:13.51%:32:2.706E-2:43:32:11:21:38 0/0:41:6:4:2:28:21.43%:16:1.1603E-2:45:22:10:12:29 0/1:39:11:8:3:51:21.57%:35:2.6733E-4:38:40:20:20:52 0/1:38:14:11:3:39:35.9%:48:1.407E-5:40:24:8:16:39 0/1:37:17:8:9:58:29.31%:57:1.9326E-6:41:41:23:18:58 0/1:38:13:6:7:32:40.62%:45:2.6443E-5:43:19:8:11:32 0/0:37:2:1:1:28:7.14%:34:2.4545E-1:36:26:8:18:29 0/0:36:5:5:0:32:15.62%:24:2.6412E-2:42:27:18:9:32 0/0:33:4:3:1:36:11.11%:34:5.7257E-2:37:32:16:16:37 0/0:36:5:2:3:50:10%:49:2.8142E-2:39:45:28:17:51 0/0:34:2:1:1:37:5.41%:50:2.4658E-1:40:35:16:19:37 0/0:35:4:3:1:39:10.26%:41:5.7662E-2:40:35:14:21:39 0/1:36:7:4:3:35:20%:22:5.6095E-3:35:28:20:8:35 0/0:35:6:5:1:34:17.65%:23:1.2287E-2:35:28:14:14:35 0/0:37:3:3:0:19:15.79%:17:1.1486E-1:38:16:8:8:20 0/0:35:3:3:0:39:7.69%:47:1.2013E-1:41:36:23:13:40 0/0:38:2:0:2:29:6.9%:37:2.4561E-1:42:27:14:13:30 0/0:34:2:1:1:41:4.88%:57:2.4691E-1:41:39:20:19:42 0/0:36:6:4:2:31:19.35%:20:1.1977E-2:39:25:7:18:31 0/0:35:2:1:1:46:4.35%:63:2.4725E-1:41:44:17:27:47 0/0:37:2:1:1:41:4.88%:57:2.4691E-1:40:39:16:23:41 0/0:37:4:1:3:33:12.12%:32:5.6777E-2:41:29:14:15:34 0/0:36:2:2:0:23:8.7%:28:2.4444E-1:36:21:14:7:24 0/0:36:2:2:0:29:6.9%:37:2.4561E-1:40:27:13:14:31 0/0:44:3:1:2:40:7.5%:46:1.2025E-1:37:37:20:17:41 0/1:35:8:7:1:46:17.39%:25:2.8033E-3:36:38:24:14:46 0/1:33:7:5:2:44:15.91%:22:6.0363E-3:37:37:20:17:45 0/0:35:4:3:1:37:10.81%:38:5.7399E-2:38:33:16:17:37 0/0:36:3:2:1:23:13.04%:22:1.1667E-1:39:20:13:7:24 0/0:37:2:0:2:52:3.85%:74:2.4757E-1:38:50:29:21:52 0/0:36:4:4:0:41:9.76%:44:5.79E-2:38:37:18:19:42 0/0:35:6:4:2:31:19.35%:20:1.1977E-2:39:25:12:13:31 0/0:36:5:2:3:30:16.67%:21:2.6093E-2:39:25:15:10:30 0/0:37:4:1:3:40:10%:40:5.7784E-2:36:36:21:15:42 0/0:34:4:3:1:36:11.11%:34:5.7257E-2:36:32:22:10:38 0/0:40:5:4:1:35:14.29%:30:2.6822E-2:36:30:16:14:38 0/0:34:3:2:1:37:8.11%:43:1.1986E-1:36:34:15:19:38 0/0:36:5:4:1:33:15.15%:27:2.6557E-2:38:28:13:15:33 0/0:37:2:2:0:29:6.9%:37:2.4561E-1:37:27:11:16:29 0/0:34:4:3:1:29:13.79%:26:5.5981E-2:38:25:11:14:31 0/0:25:1:1:0:21:4.76%:31:5E-1:36:20:10:10:21 0/0:33:3:2:1:29:10.34%:31:1.1842E-1:39:26:13:13:29 0/0:38:1:1:0:19:5.26%:28:5E-1:35:18:13:5:22 0/0:37:2:1:1:39:5.13%:54:2.4675E-1:37:37:22:15:43 0/0:0:0:0:0:19:0%:37:1E0:35:19:14:5:20 0/0:37:5:3:2:39:12.82%:35:2.7273E-2:39:34:18:16:39 0/1:37:18:12:6:58:31.03%:60:8.0038E-7:38:40:22:18:59 0/1:36:12:7:5:54:22.22%:39:1.2122E-4:39:41:21:20:55 0/1:37:17:10:7:48:35.42%:58:1.3018E-6:40:30:15:15:48 0/0:35:5:3:2:43:11.63%:38:2.7555E-2:37:37:20:17:44 0/0:37:2:0:2:35:5.71%:47:2.4638E-1:39:33:16:17:35 0/0:36:2:1:1:21:9.52%:25:2.439E-1:42:19:10:9:21 0/0:36:3:2:1:41:7.32%:50:1.2037E-1:39:38:15:23:41 0/0:36:5:5:0:41:12.2%:38:2.7465E-2:39:36:22:14:41 0/0:38:2:0:2:33:6.06%:44:2.4615E-1:38:31:15:16:33 0/0:37:3:2:1:29:10.34%:31:1.1842E-1:38:26:14:12:30 0/0:45:3:2:1:38:7.89%:43:1.2E-1:44:35:16:19:41 0/0:36:4:1:3:53:7.55%:62:5.8946E-2:41:49:23:26:54 0/1:35:18:15:3:58:31.03%:60:8.0038E-7:38:40:26:14:60 0/1:38:12:7:5:37:32.43%:40:8.4418E-5:35:25:12:13:38 MTB_anc 1634592 . C G . PASS AC=65;AF=0.217;AN=300;ANN=G|synonymous_variant|LOW|PE_PGRS27_Rv1450c|gene1484|transcript|Transcript_gene1484|Coding|1/1|c.36G>C|p.Ala12Ala|36/3990|36/3990|12/1329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1634592C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1634592C>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:35:9:7:2:55:16.36%:28:1.3694E-3:40:46:23:23:57 0/1:41:8:6:2:20:40%:27:1.638E-3:46:12:4:8:21 0/1:35:7:6:1:46:15.22%:22:6.1097E-3:45:39:22:17:49 0/1:36:8:4:4:34:23.53%:26:2.4562E-3:45:26:11:15:35 0/0:35:2:1:1:30:6.67%:37:2.4576E-1:39:28:13:15:32 0/0:35:2:2:0:32:6.25%:40:2.4603E-1:41:30:12:18:32 0/1:38:12:7:5:42:28.57%:40:9.7866E-5:51:30:9:21:44 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/1:41:10:7:3:31:32.26%:33:4.1251E-4:37:21:14:7:32 0/1:41:14:9:5:45:31.11%:47:1.8462E-5:41:31:18:13:46 0/0:39:6:6:0:28:21.43%:16:1.1603E-2:40:22:14:8:31 0/1:39:12:8:4:44:27.27%:39:1.027E-4:40:32:19:13:46 0/1:39:8:7:1:24:33.33%:27:1.949E-3:46:16:8:8:25 0/1:35:18:14:4:54:33.33%:61:6.9602E-7:43:36:17:19:55 0/1:35:7:4:3:28:25%:22:5.1054E-3:43:21:8:13:29 0/0:46:5:4:1:26:19.23%:17:2.531E-2:38:21:14:7:28 0/0:35:6:5:1:35:17.14%:25:1.238E-2:41:29:15:14:35 0/1:32:7:5:2:27:25.93%:22:5.0143E-3:45:20:9:11:31 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:39:15:7:8:17 0/0:33:4:3:1:26:15.38%:20:5.5222E-2:39:22:11:11:27 0/0:37:1:1:0:36:2.78%:55:5E-1:38:35:21:14:38 0/1:36:18:11:7:52:34.62%:61:6.4267E-7:39:34:17:17:54 0/1:40:8:3:5:28:28.57%:26:2.188E-3:44:20:11:9:30 0/1:39:11:7:4:53:20.75%:35:2.7419E-4:41:42:26:16:56 0/1:35:7:5:2:43:16.28%:22:5.9972E-3:41:36:18:18:44 0/0:34:1:1:0:25:4%:38:5E-1:41:24:11:13:25 0/1:37:8:5:3:26:30.77%:26:2.076E-3:36:18:11:7:27 0/0:37:6:5:1:25:24%:11:1.0968E-2:39:18:9:9:25 0/1:36:10:4:6:28:35.71%:34:3.6855E-4:38:18:10:8:29 0/0:35:2:2:0:31:6.45%:40:2.459E-1:43:29:15:14:31 0/1:37:19:11:8:51:37.25%:66:2.4191E-7:41:32:15:17:54 0/0:36:6:2:4:43:13.95%:36:1.2967E-2:39:37:25:12:45 0/0:38:2:0:2:22:9.09%:24:2.4419E-1:46:20:13:7:22 0/1:34:7:4:3:22:31.82%:23:4.4505E-3:38:15:5:10:23 0/0:40:6:4:2:38:15.79%:28:1.2628E-2:47:32:12:20:38 0/1:36:11:6:5:37:29.73%:36:2.0455E-4:39:26:9:17:37 0/1:38:18:8:10:51:35.29%:62:6.1577E-7:41:33:17:16:53 0/1:38:26:17:9:68:38.24%:91:7.6618E-10:45:42:28:14:69 0/0:37:2:2:0:42:4.76%:57:2.4699E-1:41:40:20:20:43 0/1:36:9:4:5:47:19.15%:28:1.2811E-3:42:38:16:22:47 0/0:33:3:2:1:39:7.69%:47:1.2013E-1:40:36:14:22:40 0/1:44:7:4:3:51:13.73%:22:6.2693E-3:39:44:24:20:52 0/1:36:8:6:2:30:26.67%:26:2.2875E-3:40:22:11:11:31 0/1:38:16:11:5:42:38.1%:55:2.607E-6:42:26:15:11:45 0/0:35:5:2:3:36:13.89%:29:2.6944E-2:43:31:14:17:37 0/1:40:7:4:3:40:17.5%:22:5.8688E-3:39:33:17:16:42 0/0:44:6:4:2:34:17.65%:23:1.2287E-2:40:28:12:16:36 0/1:36:12:10:2:44:27.27%:39:1.027E-4:40:32:20:12:46 0/1:36:15:7:8:53:28.3%:50:9.6403E-6:41:38:19:19:55 0/1:36:12:9:3:37:32.43%:40:8.4418E-5:42:25:8:17:38 0/1:37:12:8:4:28:42.86%:42:5.4482E-5:43:16:9:7:28 0/0:41:6:3:3:43:13.95%:36:1.2967E-2:38:37:24:13:45 0/1:40:7:4:3:31:22.58%:22:5.3469E-3:45:24:12:12:33 0/1:35:9:5:4:39:23.08%:29:1.162E-3:41:30:13:17:39 0/1:38:14:6:8:43:32.56%:47:1.727E-5:42:29:15:14:47 0/1:39:13:7:6:38:34.21%:44:3.5456E-5:36:25:6:19:40 0/1:38:16:10:6:50:32%:54:3.6584E-6:39:34:14:20:50 0/0:35:3:2:1:24:12.5%:22:1.1667E-1:42:20:12:8:24 0/1:40:21:14:7:53:39.62%:74:3.7578E-8:41:31:20:11:56 0/1:40:13:10:3:43:30.23%:43:4.2025E-5:43:30:16:14:43 0/0:43:4:4:0:22:18.18%:15:5.3885E-2:43:18:9:9:23 0/1:39:7:5:2:43:16.28%:22:5.9972E-3:41:36:17:19:46 0/1:38:14:10:4:49:28.57%:46:2.0696E-5:40:35:14:21:50 0/0:35:3:3:0:37:8.11%:43:1.1986E-1:41:34:22:12:38 0/0:35:6:6:0:37:16.22%:28:1.2549E-2:41:31:16:15:37 0/1:39:7:3:4:52:13.46%:22:6.2977E-3:44:45:22:23:56 0/0:33:3:3:0:31:9.68%:34:1.1885E-1:41:28:15:13:33 0/0:36:6:4:2:46:13.04%:39:1.3136E-2:43:40:18:22:48 0/1:50:7:4:3:25:28%:23:4.8126E-3:41:18:8:10:26 0/0:37:5:4:1:26:19.23%:17:2.531E-2:41:21:10:11:26 0/1:37:14:10:4:42:33.33%:47:1.6656E-5:40:28:11:17:44 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:21 0/1:38:9:7:2:23:39.13%:31:7.4174E-4:44:14:5:9:23 0/0:37:6:6:0:34:17.65%:23:1.2287E-2:44:28:13:15:34 0/1:36:7:6:1:41:17.07%:22:5.9136E-3:42:34:12:22:41 0/1:34:16:8:8:44:36.36%:55:2.8784E-6:45:28:11:17:46 0/1:38:14:6:8:40:35%:48:1.5388E-5:40:26:14:12:41 0/1:40:15:9:6:39:38.46%:52:5.7558E-6:48:24:12:12:39 0/0:33:5:5:0:38:13.16%:32:2.7169E-2:43:33:17:16:39 0/1:40:9:5:4:42:21.43%:29:1.2112E-3:42:33:18:15:43 0/1:36:7:6:1:34:20.59%:22:5.5492E-3:42:27:9:18:36 0/0:37:6:4:2:57:10.53%:56:1.3607E-2:42:51:26:25:58 0/1:36:15:11:4:46:32.61%:51:7.8109E-6:39:31:16:15:46 0/0:35:4:3:1:35:11.43%:35:5.7106E-2:46:31:17:14:36 0/0:34:4:4:0:36:11.11%:34:5.7257E-2:39:32:19:13:36 0/0:37:6:3:3:40:15%:30:1.2773E-2:41:34:16:18:42 0/0:42:5:2:3:33:15.15%:27:2.6557E-2:44:28:13:15:34 0/1:37:7:3:4:21:33.33%:23:4.3101E-3:41:14:7:7:21 0/0:34:5:3:2:42:11.9%:38:2.7555E-2:43:37:17:20:42 0/1:40:9:5:4:28:32.14%:30:9.1169E-4:43:19:10:9:28 0/0:35:4:3:1:36:11.11%:34:5.7257E-2:42:32:12:20:38 0/0:41:5:3:2:26:19.23%:17:2.531E-2:44:21:10:11:27 0/1:38:12:8:4:51:23.53%:39:1.1751E-4:38:39:20:19:52 0/1:37:15:11:4:37:40.54%:52:5.1339E-6:40:22:8:14:38 0/1:36:17:8:9:56:30.36%:57:1.8236E-6:41:39:22:17:58 0/1:40:13:6:7:32:40.62%:45:2.6443E-5:41:19:8:11:32 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:35:26:10:16:29 0/0:33:4:4:0:29:13.79%:26:5.5981E-2:43:25:16:9:31 0/0:37:4:3:1:33:12.12%:32:5.6777E-2:37:29:15:14:36 0/0:37:5:2:3:49:10.2%:50:2.8079E-2:40:44:28:16:50 0/0:38:2:1:1:39:5.13%:54:2.4675E-1:39:37:17:20:39 0/0:33:4:3:1:38:10.53%:37:5.7534E-2:39:34:12:22:39 0/1:36:7:4:3:33:21.21%:22:5.4855E-3:34:26:19:7:35 0/0:34:5:4:1:32:15.62%:24:2.6412E-2:36:27:15:12:35 0/0:35:3:3:0:19:15.79%:17:1.1486E-1:38:16:9:7:20 0/0:35:3:3:0:41:7.32%:50:1.2037E-1:40:38:25:13:42 0/0:38:2:0:2:27:7.41%:34:2.4528E-1:42:25:13:12:29 0/0:34:2:1:1:41:4.88%:57:2.4691E-1:41:39:21:18:42 0/0:33:6:4:2:32:18.75%:20:1.2087E-2:38:26:8:18:32 0/0:35:3:2:1:43:6.98%:53:1.2059E-1:39:40:16:24:47 0/0:38:2:1:1:40:5%:53:2.4684E-1:39:38:16:22:41 0/0:36:5:2:3:32:15.62%:24:2.6412E-2:41:27:14:13:33 0/0:37:2:2:0:22:9.09%:24:2.4419E-1:36:20:15:5:24 0/0:37:2:2:0:30:6.67%:37:2.4576E-1:40:28:14:14:31 0/0:45:3:1:2:38:7.89%:43:1.2E-1:37:35:21:14:40 0/1:35:8:7:1:44:18.18%:25:2.7573E-3:36:36:24:12:47 0/0:34:6:4:2:38:15.79%:28:1.2628E-2:36:32:19:13:46 0/0:36:4:3:1:37:10.81%:38:5.7399E-2:37:33:16:17:38 0/0:37:3:2:1:22:13.64%:19:1.1628E-1:38:19:13:6:23 0/0:38:2:0:2:49:4.08%:71:2.4742E-1:39:47:28:19:52 0/0:36:4:4:0:40:10%:40:5.7784E-2:38:36:19:17:41 0/0:36:6:4:2:31:19.35%:20:1.1977E-2:40:25:13:12:32 0/0:37:5:2:3:29:17.24%:22:2.5917E-2:39:24:15:9:30 0/0:36:4:1:3:38:10.53%:37:5.7534E-2:37:34:20:14:42 0/0:37:3:2:1:36:8.33%:40:1.1972E-1:36:33:22:11:39 0/0:38:5:4:1:35:14.29%:30:2.6822E-2:35:30:17:13:37 0/0:31:3:2:1:34:8.82%:37:1.194E-1:35:31:14:17:39 0/0:35:5:4:1:30:16.67%:21:2.6093E-2:38:25:12:13:32 0/0:37:2:2:0:26:7.69%:30:2.451E-1:38:24:10:14:30 0/0:35:4:3:1:31:12.9%:29:5.6405E-2:38:27:13:14:31 0/0:32:1:1:0:17:5.88%:24:5E-1:37:16:8:8:19 0/0:34:3:2:1:28:10.71%:28:1.1818E-1:38:25:13:12:30 0/0:34:1:1:0:20:5%:27:5E-1:36:19:13:6:22 0/0:37:2:1:1:40:5%:53:2.4684E-1:37:38:24:14:43 0/0:0:0:0:0:19:0%:37:1E0:34:19:14:5:20 0/0:37:5:3:2:37:13.51%:32:2.706E-2:40:32:18:14:39 0/1:36:17:11:6:57:29.82%:57:1.8784E-6:38:40:23:17:59 0/1:36:10:5:5:52:19.23%:32:5.9987E-4:39:41:21:20:56 0/1:37:18:10:8:44:40.91%:63:4.2568E-7:40:26:13:13:47 0/0:38:4:2:2:42:9.52%:43:5.801E-2:37:38:21:17:43 0/0:38:2:0:2:35:5.71%:47:2.4638E-1:39:33:16:17:35 0/0:38:1:0:1:20:5%:27:5E-1:42:19:10:9:21 0/0:37:3:2:1:40:7.5%:46:1.2025E-1:40:37:15:22:40 0/0:37:5:5:0:38:13.16%:32:2.7169E-2:39:33:20:13:42 0/0:38:2:0:2:32:6.25%:40:2.4603E-1:38:30:15:15:33 0/0:37:3:2:1:27:11.11%:28:1.1792E-1:38:24:13:11:29 0/0:45:3:2:1:39:7.69%:47:1.2013E-1:43:36:17:19:41 0/0:37:4:1:3:54:7.41%:62:5.9012E-2:41:50:23:27:55 0/1:34:16:13:3:56:28.57%:53:4.3766E-6:38:40:27:13:59 0/1:37:12:7:5:37:32.43%:40:8.4418E-5:35:25:13:12:39 MTB_anc 1634633 . A T . PASS AC=26;AF=0.087;AN=300;ANN=T|intergenic_region|MODIFIER|PE_PGRS27_Rv1450c-Rv1451_Rv1451|gene1484-gene1485|intergenic_region|gene1484-gene1485|||n.1634633A>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:7:5:2:52:13.46%:22:6.2977E-3:40:45:22:23:59 0/0:44:6:4:2:21:28.57%:9:1.0344E-2:42:15:7:8:25 0/0:37:1:1:0:43:2.33%:70:5E-1:45:42:25:17:55 0/0:36:4:3:1:30:13.33%:26:5.62E-2:41:26:13:13:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:38 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:32 0/1:41:11:6:5:40:27.5%:36:2.2064E-4:46:29:7:22:44 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:26 0/0:41:5:3:2:31:16.13%:24:2.6257E-2:44:26:17:9:38 0/0:43:6:4:2:41:14.63%:33:1.2841E-2:44:35:22:13:47 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:31 0/0:37:6:4:2:37:16.22%:28:1.2549E-2:41:31:21:10:43 0/0:40:4:4:0:24:16.67%:18:5.461E-2:45:20:8:12:26 0/1:35:14:11:3:50:28%:46:2.1224E-5:39:36:19:17:58 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:24 0/0:37:1:1:0:26:3.85%:38:5E-1:39:25:15:10:33 0/0:34:4:4:0:27:14.81%:23:5.5494E-2:41:23:12:11:35 0/0:37:4:3:1:27:14.81%:23:5.5494E-2:43:23:8:15:31 0/0:37:2:2:0:16:12.5%:15:2.4194E-1:42:14:8:6:21 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:34 0/1:37:11:7:4:50:22%:35:2.6004E-4:38:38:22:16:59 0/1:41:8:3:5:25:32%:26:2.0146E-3:45:17:8:9:30 0/0:34:5:4:1:42:11.9%:38:2.7555E-2:43:37:21:16:49 0/0:35:5:3:2:37:13.51%:32:2.706E-2:42:32:19:13:41 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:25 0/0:38:5:4:1:21:23.81%:12:2.3921E-2:39:16:9:7:30 0/0:25:1:1:0:15:6.67%:21:5E-1:44:14:7:7:20 0/1:33:8:3:5:24:33.33%:27:1.949E-3:42:16:8:8:25 0/0:37:1:1:0:28:3.57%:41:5E-1:42:27:14:13:38 0/0:39:6:3:3:34:17.65%:23:1.2287E-2:40:28:15:13:46 0/0:0:0:0:0:40:0%:74:1E0:37:40:23:17:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:45:3:1:2:18:16.67%:14:1.1429E-1:33:15:6:9:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:37 0/0:38:6:4:2:27:22.22%:16:1.1461E-2:41:21:12:9:33 0/1:34:9:5:4:41:21.95%:29:1.1955E-3:41:32:17:15:46 0/1:37:10:6:4:54:18.52%:32:6.18E-4:44:44:28:16:63 0/0:37:1:1:0:37:2.7%:59:5E-1:40:36:18:18:44 0/0:38:4:2:2:42:9.52%:43:5.801E-2:43:38:15:23:47 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:39 0/0:40:4:2:2:42:9.52%:43:5.801E-2:43:38:19:19:50 0/0:31:3:2:1:22:13.64%:19:1.1628E-1:44:19:9:10:26 0/0:39:6:4:2:31:19.35%:20:1.1977E-2:41:25:14:11:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:34 0/0:39:6:3:3:38:15.79%:28:1.2628E-2:37:32:14:18:46 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:39 0/1:36:9:9:0:41:21.95%:29:1.1955E-3:40:32:18:14:46 0/1:40:9:2:7:38:23.68%:29:1.1442E-3:43:29:12:17:50 0/1:34:9:6:3:28:32.14%:30:9.1169E-4:40:19:6:13:33 0/1:40:10:6:4:21:47.62%:36:2.3971E-4:50:11:5:6:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:38 0/0:39:4:2:2:33:12.12%:32:5.6777E-2:43:29:12:17:35 0/0:36:5:4:1:31:16.13%:24:2.6257E-2:44:26:11:15:39 0/0:42:6:3:3:32:18.75%:20:1.2087E-2:43:26:12:14:39 0/0:33:6:5:1:26:23.08%:13:1.1309E-2:41:20:11:9:36 0/1:40:8:4:4:41:19.51%:25:2.6808E-3:39:33:14:19:49 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:20 0/1:39:11:7:4:38:28.95%:36:2.1011E-4:43:27:17:10:51 0/0:38:6:4:2:36:16.67%:25:1.2467E-2:45:30:17:13:40 0/0:37:1:1:0:18:5.56%:24:5E-1:44:17:8:9:22 0/0:40:4:3:1:35:11.43%:35:5.7106E-2:43:31:17:14:43 0/1:36:7:5:2:42:16.67%:22:5.9563E-3:38:35:14:21:48 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:38 0/0:0:0:0:0:47:0%:89:1E0:45:47:23:24:52 0/0:37:2:2:0:27:7.41%:34:2.4528E-1:43:25:14:11:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:42 0/0:46:4:3:1:23:17.39%:18:5.4264E-2:42:19:9:10:26 0/0:41:3:3:0:23:13.04%:22:1.1667E-1:41:20:10:10:28 0/1:34:8:6:2:36:22.22%:25:2.5282E-3:34:28:11:17:41 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:26 0/0:37:4:2:2:14:28.57%:6:4.8889E-2:44:10:4:6:19 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:38 0/1:43:9:3:6:34:26.47%:29:1.0644E-3:43:25:14:11:38 0/1:35:10:5:5:34:29.41%:33:4.51E-4:42:24:9:15:43 0/1:40:9:4:5:36:25%:29:1.1061E-3:45:27:16:11:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:37 0/0:34:5:3:2:36:13.89%:29:2.6944E-2:40:31:16:15:42 0/0:36:4:3:1:34:11.76%:31:5.6946E-2:43:30:13:17:39 0/0:37:1:1:0:45:2.22%:73:5E-1:40:44:19:25:53 0/0:36:5:5:0:33:15.15%:27:2.6557E-2:37:28:15:13:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:36 0/0:37:1:1:0:32:3.12%:48:5E-1:40:31:12:19:43 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:33 0/1:40:8:4:4:23:34.78%:27:1.8791E-3:46:15:10:5:25 0/0:37:1:1:0:33:3.03%:52:5E-1:44:32:15:17:39 0/0:41:3:2:1:18:16.67%:14:1.1429E-1:41:15:8:7:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:30 0/0:44:5:3:2:25:20%:17:2.5076E-2:47:20:7:13:29 0/1:40:8:4:4:42:19.05%:25:2.7074E-3:38:34:16:18:48 0/0:37:6:5:1:25:24%:14:1.1145E-2:41:19:7:12:33 0/1:35:8:4:4:45:17.78%:25:2.7808E-3:39:37:19:18:58 0/0:31:4:1:3:23:17.39%:18:5.4264E-2:38:19:8:11:30 0/0:25:1:0:1:26:3.85%:38:5E-1:40:25:11:14:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:37 0/0:37:1:1:0:48:2.08%:76:5E-1:42:47:30:17:55 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:39 0/0:35:2:1:1:31:6.45%:40:2.459E-1:37:29:19:10:42 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:34 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:19 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:46 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:24 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:42 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:44 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:45 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:28 0/0:0:0:0:0:24:0%:44:1E0:36:24:15:9:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:37 0/0:0:0:0:0:36:0%:66:1E0:38:36:21:15:47 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:40 0/0:32:1:0:1:30:3.33%:44:5E-1:38:29:14:15:39 0/0:33:1:1:0:32:3.12%:48:5E-1:39:31:13:18:45 0/0:32:1:0:1:21:4.76%:31:5E-1:37:20:12:8:23 0/0:0:0:0:0:52:0%:96:1E0:38:52:33:19:59 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:31 0/0:33:1:0:1:26:3.85%:38:5E-1:38:25:14:11:29 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:36 0/0:0:0:0:0:26:0%:47:1E0:38:26:19:7:32 0/0:33:1:1:0:31:3.23%:48:5E-1:38:30:12:18:39 0/0:0:0:0:0:30:0%:55:1E0:36:30:13:17:37 0/0:37:1:1:0:26:3.85%:38:5E-1:41:25:13:12:29 0/0:0:0:0:0:31:0%:59:1E0:37:31:12:19:35 0/0:24:1:0:1:30:3.33%:44:5E-1:38:29:13:16:32 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:22 0/0:37:1:1:0:28:3.57%:41:5E-1:39:27:14:13:36 0/0:0:0:0:0:18:0%:32:1E0:39:18:14:4:23 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:40 0/0:0:0:0:0:20:0%:36:1E0:35:20:14:6:21 0/0:33:1:0:1:32:3.12%:48:5E-1:40:31:15:16:41 0/1:35:9:6:3:55:16.36%:28:1.3596E-3:37:45:26:19:63 0/0:35:6:3:3:43:13.95%:36:1.2967E-2:40:37:19:18:51 0/1:35:8:5:3:37:21.62%:25:2.5617E-3:37:29:13:16:41 0/0:0:0:0:0:42:0%:77:1E0:37:42:21:21:47 0/0:30:1:0:1:23:4.35%:34:5E-1:41:22:14:8:34 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:22 0/0:26:1:0:1:33:3.03%:52:5E-1:39:32:15:17:40 0/0:37:1:1:0:30:3.33%:44:5E-1:40:29:15:14:40 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:36 0/0:37:1:1:0:20:5%:27:5E-1:37:19:9:10:27 0/0:37:1:1:0:40:2.5%:62:5E-1:40:39:16:23:49 0/0:0:0:0:0:46:0%:85:1E0:39:46:24:22:54 0/1:34:9:7:2:42:21.43%:29:1.2112E-3:41:33:21:12:51 0/1:37:7:4:3:27:25.93%:22:5.0143E-3:38:20:12:8:38 MTB_anc 1634636 . T A . PASS AC=30;AF=0.100;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1634636T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|RBS|||n.1634636T>A||||||,A|intergenic_region|MODIFIER|PE_PGRS27_Rv1450c-Rv1451_Rv1451|gene1484-gene1485|intergenic_region|gene1484-gene1485|||n.1634636T>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:8:5:3:56:14.29%:25:2.9874E-3:43:48:23:25:62 0/0:47:6:4:2:21:28.57%:9:1.0344E-2:46:15:7:8:27 0/0:35:2:1:1:47:4.26%:67:2.4731E-1:45:45:26:19:57 0/0:40:3:2:1:26:11.54%:25:1.1765E-1:45:23:12:11:32 0/0:27:1:0:1:34:2.94%:51:5E-1:41:33:17:16:40 0/0:27:1:0:1:31:3.23%:48:5E-1:45:30:12:18:35 0/1:41:11:6:5:41:26.83%:36:2.2563E-4:45:30:7:23:45 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:26 0/0:44:5:2:3:34:14.71%:27:2.6693E-2:44:29:17:12:38 0/0:43:6:3:3:44:13.64%:36:1.3026E-2:44:38:22:16:50 0/0:27:1:0:1:28:3.57%:41:5E-1:43:27:15:12:35 0/1:35:7:4:3:38:18.42%:22:5.7727E-3:45:31:20:11:43 0/0:41:4:4:0:22:18.18%:15:5.3885E-2:48:18:8:10:28 0/1:37:18:11:7:57:31.58%:61:7.7462E-7:40:39:21:18:65 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:26 0/0:30:3:0:3:26:11.54%:25:1.1765E-1:38:23:13:10:33 0/0:38:4:3:1:25:16%:21:5.4928E-2:43:21:11:10:34 0/0:33:3:2:1:22:13.64%:19:1.1628E-1:45:19:7:12:33 0/0:37:1:1:0:15:6.67%:21:5E-1:43:14:7:7:20 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:35 0/1:35:14:6:8:50:28%:46:2.1224E-5:41:36:21:15:63 0/1:41:10:3:7:27:37.04%:34:3.5253E-4:47:17:9:8:34 0/0:33:6:4:2:43:13.95%:36:1.2967E-2:41:37:21:16:52 0/0:37:3:3:0:33:9.09%:37:1.1923E-1:42:30:17:13:47 0/0:36:1:0:1:22:4.55%:31:5E-1:42:21:12:9:26 0/0:45:4:4:0:20:20%:13:5.3015E-2:38:16:9:7:30 0/0:37:1:1:0:19:5.26%:28:5E-1:41:18:7:11:20 0/1:37:7:3:4:23:30.43%:23:4.5803E-3:43:16:8:8:25 0/0:36:2:1:1:32:6.25%:40:2.4603E-1:41:30:14:16:39 0/1:47:8:4:4:39:20.51%:25:2.624E-3:40:31:14:17:49 0/0:25:1:0:1:45:2.22%:69:5E-1:38:43:24:19:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:28 0/0:41:4:1:3:18:22.22%:10:5.1948E-2:37:14:6:8:25 0/0:29:1:0:1:32:3.12%:48:5E-1:43:31:13:18:41 0/1:39:7:4:3:28:25%:22:5.1054E-3:43:21:11:10:43 0/1:41:7:4:3:40:17.5%:22:5.8688E-3:41:33:18:15:47 0/1:38:13:5:8:55:23.64%:42:5.473E-5:45:42:27:15:72 0/0:34:3:1:2:40:7.5%:46:1.2025E-1:42:37:18:19:52 0/0:35:6:1:5:45:13.33%:39:1.3082E-2:42:39:16:23:52 0/0:25:1:0:1:34:2.94%:51:5E-1:42:33:11:22:43 0/0:42:3:2:1:44:6.82%:53:1.2069E-1:43:41:23:18:53 0/0:41:3:2:1:25:12%:25:1.1735E-1:43:22:11:11:28 0/1:38:8:5:3:34:23.53%:26:2.4562E-3:42:26:14:12:44 0/0:26:2:0:2:32:6.25%:40:2.4603E-1:43:30:13:17:38 0/1:32:9:3:6:40:22.5%:29:1.1791E-3:40:31:13:18:48 0/0:29:1:0:1:34:2.94%:51:5E-1:41:33:15:18:41 0/1:38:10:9:1:46:21.74%:32:5.6532E-4:38:36:18:18:54 0/1:37:10:2:8:41:24.39%:32:5.2405E-4:44:31:11:20:54 0/1:43:8:5:3:28:28.57%:26:2.188E-3:39:20:7:13:33 0/1:38:10:6:4:24:41.67%:35:2.9985E-4:49:14:5:9:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:43 0/0:43:3:1:2:29:10.34%:31:1.1842E-1:44:26:12:14:35 0/0:42:5:3:2:33:15.15%:27:2.6557E-2:44:28:11:17:41 0/0:41:5:2:3:34:14.71%:27:2.6693E-2:43:29:13:16:41 0/1:31:7:4:3:35:20%:22:5.6095E-3:39:28:12:16:43 0/1:37:9:3:6:39:23.08%:29:1.162E-3:41:30:15:15:52 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:21 0/1:39:12:6:6:46:26.09%:39:1.05E-4:42:33:18:15:57 0/0:45:6:3:3:38:15.79%:28:1.2628E-2:45:32:19:13:43 0/0:37:1:1:0:20:5%:27:5E-1:43:19:8:11:26 0/0:41:6:4:2:37:16.22%:28:1.2549E-2:42:31:17:14:49 0/1:38:7:5:2:39:17.95%:22:5.8219E-3:41:32:14:18:50 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:33 0/0:27:1:0:1:32:3.12%:48:5E-1:43:31:17:14:44 0/0:25:1:0:1:48:2.08%:76:5E-1:46:47:25:22:53 0/0:37:1:1:0:32:3.12%:48:5E-1:41:31:14:17:37 0/0:27:1:0:1:41:2.44%:66:5E-1:45:40:19:21:46 0/0:49:3:1:2:21:14.29%:19:1.1585E-1:43:18:9:9:26 0/0:41:4:3:1:23:17.39%:18:5.4264E-2:44:19:10:9:28 0/1:38:7:5:2:33:21.21%:22:5.4855E-3:38:26:11:15:41 0/0:24:1:0:1:21:4.76%:31:5E-1:45:20:11:9:27 0/0:39:4:2:2:14:28.57%:6:4.8889E-2:46:10:4:6:22 0/0:24:1:0:1:26:3.85%:38:5E-1:43:25:10:15:33 0/0:29:1:0:1:33:3.03%:52:5E-1:40:32:14:18:41 0/1:40:10:2:8:36:27.78%:33:4.7404E-4:40:26:13:13:43 0/1:35:9:4:5:36:25%:29:1.1061E-3:43:27:10:17:45 0/1:44:9:4:5:35:25.71%:29:1.0857E-3:46:26:16:10:42 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:36 0/0:42:3:2:1:35:8.57%:40:1.1957E-1:41:32:16:16:41 0/0:35:4:3:1:32:12.5%:29:5.6596E-2:42:28:12:16:43 0/0:25:2:0:2:49:4.08%:71:2.4742E-1:41:47:20:27:58 0/0:36:4:4:0:35:11.43%:35:5.7106E-2:37:31:16:15:41 0/0:29:2:0:2:34:5.88%:43:2.4627E-1:47:32:17:15:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:39 0/0:25:1:0:1:30:3.33%:44:5E-1:43:29:12:17:45 0/0:26:3:0:3:32:9.38%:34:1.1905E-1:39:29:13:16:36 0/1:39:8:4:4:24:33.33%:27:1.949E-3:46:16:10:6:27 0/0:27:1:0:1:35:2.86%:55:5E-1:42:34:14:20:42 0/0:45:3:2:1:17:17.65%:14:1.1364E-1:43:14:7:7:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:33 0/0:41:6:3:3:27:22.22%:16:1.1461E-2:45:21:7:14:30 0/0:43:6:3:3:41:14.63%:33:1.2841E-2:39:35:15:20:50 0/0:37:6:5:1:25:24%:14:1.1145E-2:38:19:6:13:36 0/1:39:9:5:4:51:17.65%:28:1.3283E-3:40:42:21:21:62 0/0:34:5:1:4:24:20.83%:14:2.4823E-2:41:19:9:10:30 0/0:36:1:0:1:28:3.57%:41:5E-1:39:26:10:16:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:39 0/0:24:2:1:1:53:3.77%:78:2.4762E-1:40:51:30:21:60 0/0:29:1:0:1:35:2.86%:55:5E-1:40:34:17:17:41 0/0:27:1:0:1:33:3.03%:52:5E-1:41:32:11:21:42 0/0:31:2:0:2:33:6.06%:44:2.4615E-1:38:31:18:13:45 0/0:29:1:0:1:29:3.45%:45:5E-1:41:28:16:12:36 0/0:24:1:0:1:20:5%:27:5E-1:42:19:8:11:23 0/0:27:3:0:3:40:7.5%:46:1.2025E-1:40:37:22:15:51 0/0:24:1:0:1:24:4.17%:34:5E-1:43:23:13:10:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:45 0/0:28:2:0:2:28:7.14%:34:2.4545E-1:42:26:10:16:34 0/0:27:1:0:1:38:2.63%:58:5E-1:41:37:13:24:45 0/0:32:1:0:1:39:2.56%:62:5E-1:39:38:18:20:48 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:31 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:35 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:50 0/0:27:2:0:2:34:5.88%:43:2.4627E-1:36:32:16:16:45 0/0:24:1:0:1:28:3.57%:41:5E-1:40:27:16:11:39 0/0:27:2:0:2:36:5.56%:47:2.4648E-1:42:34:15:19:50 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:25 0/0:27:1:0:1:50:2%:80:5E-1:40:49:32:17:64 0/0:27:1:0:1:39:2.56%:62:5E-1:40:38:19:19:48 0/0:24:1:0:1:27:3.7%:41:5E-1:46:26:16:10:34 0/0:33:1:0:1:25:4%:34:5E-1:40:23:14:9:35 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:38 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:36 0/0:37:1:1:0:32:3.12%:48:5E-1:38:31:13:18:45 0/0:0:0:0:0:28:0%:51:1E0:36:28:14:14:39 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:37 0/0:31:2:1:1:27:7.41%:34:2.4528E-1:41:25:12:13:32 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:22 0/0:31:1:0:1:31:3.23%:48:5E-1:42:30:15:15:45 0/0:28:3:0:3:24:12.5%:22:1.1702E-1:38:21:14:7:27 0/0:0:0:0:0:34:0%:62:1E0:37:34:17:17:43 0/0:0:0:0:0:20:0%:36:1E0:38:20:14:6:21 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:45 0/1:35:7:6:1:49:14.29%:22:6.2092E-3:39:42:27:15:66 0/0:42:6:2:4:47:12.77%:42:1.3188E-2:42:41:19:22:55 0/1:36:8:4:4:33:24.24%:26:2.4173E-3:35:25:14:11:46 0/0:27:1:0:1:42:2.38%:66:5E-1:38:41:21:20:48 0/0:31:1:0:1:29:3.45%:45:5E-1:39:28:14:14:36 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:24 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:44 0/0:25:2:0:2:31:6.45%:40:2.459E-1:42:29:16:13:46 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:38 0/0:27:1:0:1:19:5.26%:28:5E-1:38:18:9:9:27 0/0:24:1:0:1:40:2.5%:62:5E-1:40:39:15:24:53 0/0:26:2:0:2:48:4.17%:67:2.4737E-1:41:46:24:22:60 0/1:39:8:6:2:42:19.05%:25:2.7074E-3:39:34:21:13:52 0/0:44:5:3:2:29:17.24%:22:2.5917E-2:38:24:15:9:43 MTB_anc 1636170 . G T . PASS AC=296;AF=1.00;AN=296;ANN=T|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.2060C>A|p.Ala687Asp|2060/2226|2060/2226|687/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636170G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636170G>T||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:30:27:3:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:24:20:4:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:35:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:24:20:4:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:26:24:2:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:30:26:4:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:37:29:8:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:23:22:1:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:29:25:4:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:26:23:3:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:34:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:34:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:35:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:26:24:2:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:33:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:34:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:34:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:24:18:6:24:100%:99:3.101E-14:0:0:0:0:27 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:32:31:1:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:16 MTB_anc 1636171 . C T . PASS AC=296;AF=1.00;AN=296;ANN=T|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.2059G>A|p.Ala687Thr|2059/2226|2059/2226|687/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636171C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636171C>T||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:28:25:3:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:13:0:14:92.86%:64:3.7391E-7:38:1:1:0:14 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:31:26:5:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:24:22:2:24:100%:99:3.101E-14:0:0:0:0:27 1/1:35:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:30:26:4:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:38:30:8:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:23:22:1:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:28:24:4:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:34:20:19:1:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:25:24:1:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:24:22:2:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:19:19:0:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:33:32:1:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 MTB_anc 1636172 . G T . PASS AC=296;AF=1.00;AN=296;ANN=T|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.2058C>A|p.Gly686Gly|2058/2226|2058/2226|686/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636172G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636172G>T||||||;HET=0;WT=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:27:25:2:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:31:26:5:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:24:20:4:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:27:25:2:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:30:26:4:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:38:30:8:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:23:22:1:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:20:19:1:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:31:27:4:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:19:16:3:20:95%:98:1.5234E-10:30:1:0:1:25 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:31:25:6:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:19:19:0:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:26:24:2:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:28:24:4:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:19:19:0:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:19:17:2:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:33:32:1:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 MTB_anc 1636733 . C G . PASS AC=287;AF=0.997;AN=288;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1497G>C|p.Gly499Gly|1497/2226|1497/2226|499/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636733C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636733C>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:40:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:34:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:17:10:7:18:94.44%:86:2.0936E-9:37:1:0:1:20 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:36:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:15 1/1:39:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:12:6:6:13:92.31%:58:1.3461E-6:60:1:0:1:15 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:35:16:9:7:18:88.89%:81:7.7134E-9:36:1:1:0:20 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:32:21:11:33:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:33:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:33:9:6:3:9:90%:46:2.0568E-5:0:0:0:0:10 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 MTB_anc 1636742 . C G . PASS AC=294;AF=1.00;AN=294;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1488G>C|p.Gly496Gly|1488/2226|1488/2226|496/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636742C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636742C>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:27:16:11:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:41:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:41:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:18:12:6:19:94.74%:99:1.1019E-10:0:0:0:0:20 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:33:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 MTB_anc 1636918 . C T . PASS AC=40;AF=0.400;AN=100;ANN=T|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1312G>A|p.Ala438Thr|1312/2226|1312/2226|438/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636918C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636918C>T||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:32:6:4:2:14:42.86%:20:7.971E-3:37:8:8:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:48:6:3:3:7:85.71%:26:2.331E-3:27:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:35:5:5:0:13:38.46%:4:1.9565E-2:34:8:7:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:32:6:5:1:10:60%:22:5.418E-3:36:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:6:6:0:10:60%:22:5.418E-3:35:4:3:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:6:6:0:7:85.71%:26:2.331E-3:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:6:4:2:7:85.71%:26:2.331E-3:32:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:7:6:1:9:77.78%:29:1.1312E-3:36:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:34:6:6:0:7:85.71%:26:2.331E-3:34:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:33:9:8:1:11:81.82%:39:1.1057E-4:35:2:2:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:12:11:1:21:57.14%:45:2.658E-5:33:9:4:5:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:5:5:0:12:41.67%:3:1.8634E-2:32:7:4:3:12 0/0:33:4:4:0:10:40%:3:4.3344E-2:35:6:4:2:11 0/1:37:6:5:1:8:75%:24:3.4965E-3:35:2:1:1:8 0/1:36:6:5:1:11:54.55%:22:6.192E-3:36:5:3:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:34:7:7:0:9:77.78%:29:1.1312E-3:37:2:0:2:9 0/1:35:7:7:0:8:87.5%:31:6.993E-4:38:1:0:1:8 0/1:32:7:7:0:9:77.78%:29:1.1312E-3:35:2:2:0:9 0/1:30:6:6:0:8:75%:24:3.4965E-3:38:2:2:0:8 0/1:39:7:6:1:10:70%:28:1.548E-3:37:3:3:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:7:6:1:11:63.64%:27:1.935E-3:37:4:3:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:8:7:1:10:80%:34:3.5723E-4:37:2:1:1:10 0/0:32:2:2:0:12:16.67%:10:2.3913E-1:35:10:7:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:7:7:0:8:87.5%:31:6.993E-4:36:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:7:7:0:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:35:3:3:0:10:30%:4:1.0526E-1:36:7:7:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:31:7:7:0:11:63.64%:27:1.935E-3:36:4:4:0:11 0/1:39:7:6:1:8:87.5%:31:6.993E-4:34:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:36:6:6:0:10 0/0:34:5:5:0:14:35.71%:4:2.037E-2:35:9:5:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:7:5:2:9:77.78%:29:1.1312E-3:36:2:1:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:39:7:6:1:12:58.33%:26:2.2883E-3:37:5:5:0:12 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:37:6:5:1:10 0/1:33:12:12:0:17:70.59%:49:1.1285E-5:36:5:3:2:18 0/1:33:9:9:0:15:60%:34:3.4983E-4:36:6:5:1:16 0/1:34:7:6:1:14:50%:25:2.8986E-3:35:7:6:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:6:5:1:10:60%:22:5.418E-3:37:4:4:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:33:9:9:0:14:64.29%:35:2.8986E-4:33:5:5:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:8:7:1:10:80%:34:3.5723E-4:38:2:2:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:34:7:7:0:10:70%:28:1.548E-3:35:3:3:0:11 0/1:35:6:6:0:8:75%:24:3.4965E-3:36:2:2:0:9 0/0:39:5:5:0:12:41.67%:3:1.8634E-2:34:7:5:2:12 0/1:46:6:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 0/1:30:6:5:1:8:75%:24:3.4965E-3:38:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:6:5:1:7:85.71%:26:2.331E-3:36:1:1:0:8 0/1:37:6:6:0:7:85.71%:26:2.331E-3:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:6:0:9:66.67%:23:4.5249E-3:35:3:2:1:10 0/1:31:6:6:0:7:85.71%:26:2.331E-3:30:1:0:1:7 0/0:32:3:3:0:10:30%:4:1.0526E-1:37:7:6:1:12 0/1:36:6:4:2:12:50%:21:6.865E-3:33:6:4:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 MTB_anc 1636927 . C T . PASS AC=22;AF=0.262;AN=84;ANN=T|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1303G>A|p.Asp435Asn|1303/2226|1303/2226|435/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636927C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636927C>T||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:35:6:4:2:14:42.86%:20:7.971E-3:37:8:8:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:6:0:15:40%:20:8.4291E-3:35:9:8:1:15 0/0:39:5:3:2:12:41.67%:3:1.8634E-2:33:7:6:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:35:7:7:0:10:70%:28:1.548E-3:35:3:2:1:11 0/0:36:4:4:0:10:40%:3:4.3344E-2:37:6:3:3:11 0/1:34:11:10:1:20:55%:41:7.2653E-5:33:9:4:5:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:39:5:5:0:13:38.46%:4:1.9565E-2:35:8:5:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:38:6:5:1:9:66.67%:23:4.5249E-3:36:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:1:1:0:8:12.5%:8:5E-1:34:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:40:5:4:1:11:45.45%:3:1.7544E-2:32:6:2:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:4:4:0:10:40%:3:4.3344E-2:32:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:6:5:1:10:60%:22:5.418E-3:35:4:4:0:10 0/0:35:2:2:0:8:25%:5:2.3333E-1:34:6:3:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:5:1:10:60%:22:5.418E-3:36:4:3:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:6:0:9:66.67%:23:4.5249E-3:35:3:2:1:9 0/0:32:3:3:0:13:23.08%:9:1.1E-1:36:10:7:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:33:6:6:0:8:75%:24:3.4965E-3:37:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:28:2:2:0:8:25%:5:2.3333E-1:34:6:3:3:8 0/0:35:5:5:0:12:41.67%:3:1.8634E-2:36:7:7:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:6:6:0:12:50%:21:6.865E-3:35:6:5:1:12 0/1:37:7:6:1:9:77.78%:29:1.1312E-3:32:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:35:6:6:0:10 0/0:36:5:5:0:16:31.25%:6:2.1691E-2:34:11:5:6:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:39:7:5:2:12:58.33%:26:2.2883E-3:34:5:2:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:34:4:4:0:14:28.57%:6:4.8889E-2:32:10:5:5:14 0/0:39:5:4:1:11:45.45%:3:1.7544E-2:35:6:5:1:12 0/0:33:3:3:0:9:33.33%:4:1.0294E-1:36:6:5:1:10 0/1:34:10:10:0:17:58.82%:38:1.4831E-4:34:7:4:3:17 0/1:36:9:9:0:17:52.94%:33:4.6348E-4:35:8:7:1:17 0/1:39:6:5:1:12:50%:21:6.865E-3:37:6:6:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:39:6:5:1:11:54.55%:22:6.192E-3:37:5:5:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:8:8:0:14:57.14%:30:9.6618E-4:34:6:6:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:9:8:1:11:81.82%:39:1.1057E-4:37:2:2:0:11 0/0:38:1:1:0:7:14.29%:8:5E-1:35:6:4:2:8 0/0:34:5:5:0:14:35.71%:4:2.037E-2:34:9:6:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:36:7:5:2:11 0/1:39:6:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 0/1:32:6:5:1:9:66.67%:23:4.5249E-3:35:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:7:7:0:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:6:6:0:7:85.71%:26:2.331E-3:37:1:0:1:7 0/0:31:3:3:0:11:27.27%:7:1.0714E-1:36:8:6:2:11 0/0:34:5:4:1:11:45.45%:3:1.7544E-2:34:6:4:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 MTB_anc 1636928 . A G . PASS AC=21;AF=0.284;AN=74;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1302T>C|p.Gly434Gly|1302/2226|1302/2226|434/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636928A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636928A>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:41:5:4:1:13:38.46%:4:1.9565E-2:38:8:8:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:5:5:0:14:35.71%:4:2.037E-2:36:9:8:1:15 0/0:39:5:3:2:11:45.45%:3:1.7544E-2:37:6:6:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:6:5:1:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:7:7:0:11:63.64%:27:1.935E-3:33:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:11:10:1:20:55%:41:7.2653E-5:36:9:4:5:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:41:5:5:0:11:45.45%:3:1.7544E-2:34:6:5:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:38:6:5:1:9:66.67%:23:4.5249E-3:37:3:2:1:9 0/0:38:4:3:1:10:40%:3:4.3344E-2:37:6:4:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:1:1:0:7:14.29%:8:5E-1:36:6:4:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:41:6:5:1:10:60%:22:5.418E-3:38:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:38:7:6:1:11:63.64%:27:1.935E-3:38:4:3:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:6:6:0:9:66.67%:23:4.5249E-3:35:3:2:1:9 0/0:35:3:3:0:13:23.08%:9:1.1E-1:37:10:7:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:6:6:0:8:75%:24:3.4965E-3:39:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:5:5:0:12:41.67%:3:1.8634E-2:38:7:7:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:6:0:10:60%:22:5.418E-3:37:4:4:0:12 0/1:37:7:6:1:8:87.5%:31:6.993E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:38:6:6:0:10 0/0:36:5:5:0:13:38.46%:4:1.9565E-2:35:8:5:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:38:8:6:2:14:57.14%:30:9.6618E-4:34:6:2:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:37:7:5:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:35:4:3:1:10:40%:3:4.3344E-2:37:6:5:1:10 0/1:35:10:10:0:15:66.67%:40:9.995E-5:37:5:4:1:17 0/1:37:9:9:0:18:50%:32:5.1645E-4:37:9:8:1:18 0/1:38:7:6:1:14:50%:25:2.8986E-3:36:7:6:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:6:5:1:12:50%:21:6.865E-3:36:6:5:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:7:7:0:13:53.85%:25:2.6087E-3:36:6:6:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:40:9:8:1:11:81.82%:39:1.1057E-4:39:2:2:0:11 0/0:36:2:2:0:9:22.22%:7:2.3529E-1:36:7:5:2:9 0/0:36:5:5:0:13:38.46%:4:1.9565E-2:35:8:6:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:34:6:6:0:9:66.67%:23:4.5249E-3:38:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:3:0:10:30%:4:1.0526E-1:37:7:5:2:10 0/1:44:6:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:7:7:0:8:87.5%:31:6.993E-4:39:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:6:6:0:7:85.71%:26:2.331E-3:32:1:0:1:7 0/0:35:3:3:0:11:27.27%:7:1.0714E-1:37:8:6:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 MTB_anc 1636934 . A G . PASS AC=22;AF=0.204;AN=108;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1296T>C|p.His432His|1296/2226|1296/2226|432/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636934A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636934A>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:36:5:4:1:14:35.71%:4:2.037E-2:37:9:9:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:48:4:3:1:10:40%:3:4.3344E-2:35:6:4:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:6:6:0:15:40%:20:8.4291E-3:36:9:8:1:16 0/0:40:5:3:2:12:41.67%:3:1.8634E-2:35:7:7:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:5:4:1:11:45.45%:3:1.7544E-2:36:6:6:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:34:7:3:4:11 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:34:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:44:2:2:0:8:25%:5:2.3333E-1:35:6:2:4:8 0/1:35:6:5:1:10:60%:22:5.418E-3:34:4:3:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:39:6:6:0:10:60%:22:5.418E-3:36:4:2:2:13 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:38:7:3:4:11 0/1:36:11:10:1:20:55%:41:7.2653E-5:36:9:4:5:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:40:5:5:0:14:35.71%:4:2.037E-2:35:9:6:3:15 0/0:45:5:5:0:11:45.45%:3:1.7544E-2:37:6:4:2:11 0/1:36:6:5:1:10:60%:22:5.418E-3:36:4:3:1:10 0/0:36:3:2:1:9:33.33%:4:1.0294E-1:37:6:4:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:31:1:1:0:9:11.11%:11:5E-1:34:8:4:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:4:4:0:10:40%:3:4.3344E-2:34:6:5:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:41:5:4:1:12:41.67%:3:1.8634E-2:34:7:2:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:34:7:4:3:12 0/0:40:3:3:0:10:30%:4:1.0526E-1:34:7:6:1:12 0/1:40:6:5:1:10:60%:22:5.418E-3:38:4:4:0:10 0/0:33:2:2:0:8:25%:5:2.3333E-1:35:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:44:6:5:1:11:54.55%:22:6.192E-3:36:5:4:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:6:6:0:8:75%:24:3.4965E-3:37:2:1:1:10 0/0:34:3:3:0:13:23.08%:9:1.1E-1:37:10:7:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:2:2:0:8:25%:5:2.3333E-1:36:6:3:3:8 0/0:37:4:4:0:12:33.33%:4:4.6584E-2:36:8:7:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:6:0:13:46.15%:21:7.4534E-3:35:7:6:1:13 0/1:38:7:6:1:9:77.78%:29:1.1312E-3:33:2:1:1:9 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:34:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:3:0:11:27.27%:7:1.0714E-1:36:8:6:2:11 0/0:32:5:5:0:15:33.33%:6:2.1073E-2:35:10:5:5:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:39:8:6:2:16:50%:29:1.2236E-3:33:8:3:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:3:3:0:11:27.27%:7:1.0714E-1:37:8:5:3:13 0/0:45:5:4:1:13:38.46%:4:1.9565E-2:35:8:7:1:16 0/0:39:4:3:1:10:40%:3:4.3344E-2:37:6:5:1:11 0/1:37:9:9:0:17:52.94%:33:4.6348E-4:34:8:4:4:18 0/1:37:9:9:0:21:42.86%:31:6.592E-4:35:12:11:1:22 0/1:36:6:5:1:14:42.86%:20:7.971E-3:37:8:6:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:6:5:1:13:46.15%:21:7.4534E-3:36:7:5:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:7:7:0:14:50%:25:2.8986E-3:36:7:6:1:14 0/0:39:3:3:0:9:33.33%:4:1.0294E-1:37:6:4:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:40:9:8:1:12:75%:37:1.6826E-4:34:3:2:1:12 0/0:34:2:2:0:9:22.22%:7:2.3529E-1:37:7:5:2:9 0/0:35:5:5:0:16:31.25%:6:2.1691E-2:35:11:7:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:3:3:0:10:30%:4:1.0526E-1:33:7:6:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:6:0:9:66.67%:23:4.5249E-3:38:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:40:3:3:0:9:33.33%:4:1.0294E-1:37:6:4:2:10 0/1:43:6:4:2:7:85.71%:26:2.331E-3:37:1:1:0:7 0/1:36:6:5:1:11:54.55%:22:6.192E-3:35:5:5:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:7:7:0:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:6:6:0:7:85.71%:26:2.331E-3:37:1:0:1:7 0/0:34:3:3:0:10:30%:4:1.0526E-1:38:7:6:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 MTB_anc 1636936 . G T . PASS AC=21;AF=0.148;AN=142;ANN=T|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1294C>A|p.His432Asn|1294/2226|1294/2226|432/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636936G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636936G>T||||||;HOM=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:36:5:4:1:15:33.33%:6:2.1073E-2:36:10:9:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:46:5:2:3:12:41.67%:3:1.8634E-2:33:7:1:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:48:4:3:1:11:36.36%:4:4.5113E-2:35:7:4:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:6:6:0:14:42.86%:20:7.971E-3:35:8:7:1:16 0/0:41:5:3:2:13:38.46%:4:1.9565E-2:37:8:7:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:38:5:4:1:11:45.45%:3:1.7544E-2:37:6:6:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:4:4:0:12:33.33%:4:4.6584E-2:34:8:3:5:12 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:36:7:4:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:38:1:1:0:10:10%:11:5E-1:33:9:3:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:43:4:4:0:10:40%:3:4.3344E-2:35:6:2:4:10 0/0:49:2:2:0:8:25%:5:2.3333E-1:35:6:2:4:8 0/1:36:6:5:1:12:50%:21:6.865E-3:36:6:3:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:7:0:15:46.67%:25:3.1609E-3:35:8:3:5:15 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:39:7:3:4:11 0/1:35:10:9:1:21:47.62%:36:2.3971E-4:36:11:4:7:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:2:2:0:9:22.22%:7:2.3529E-1:34:7:4:3:9 0/0:41:5:5:0:15:33.33%:6:2.1073E-2:36:10:6:4:15 0/0:48:4:4:0:10:40%:3:4.3344E-2:36:6:4:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:34:3:2:1:11:27.27%:7:1.0714E-1:35:8:5:3:11 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:35:7:4:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:30:1:1:0:10:10%:11:5E-1:35:9:4:5:10 0/0:36:4:3:1:10:40%:3:4.3344E-2:37:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:36:7:5:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:5:4:1:13:38.46%:4:1.9565E-2:34:8:2:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:2:2:0:8:25%:5:2.3333E-1:37:6:5:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:35:4:4:0:12:33.33%:4:4.6584E-2:32:8:4:4:12 0/0:41:4:4:0:11:36.36%:4:4.5113E-2:36:7:5:2:12 0/1:38:6:5:1:10:60%:22:5.418E-3:36:4:4:0:10 0/0:34:2:2:0:9:22.22%:7:2.3529E-1:36:7:3:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:41:7:6:1:13:53.85%:25:2.6087E-3:36:6:4:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:30:1:1:0:7:14.29%:8:5E-1:34:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:6:6:0:10:60%:22:5.418E-3:35:4:2:2:10 0/0:36:3:3:0:16:18.75%:11:1.129E-1:35:13:7:6:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:39:5:5:0:11:45.45%:3:1.7544E-2:34:6:2:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:42:4:2:2:10:40%:3:4.3344E-2:34:6:5:1:10 0/0:37:2:2:0:8:25%:5:2.3333E-1:36:6:2:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:6:0:8:75%:24:3.4965E-3:37:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:30:1:1:0:8:12.5%:8:5E-1:36:7:3:4:9 0/0:35:5:5:0:16:31.25%:6:2.1691E-2:36:11:8:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:6:0:13:46.15%:21:7.4534E-3:36:7:6:1:13 0/1:39:7:6:1:10:70%:28:1.548E-3:34:3:1:2:10 0/0:37:3:3:0:10:30%:4:1.0526E-1:35:7:3:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:3:3:0:11:27.27%:7:1.0714E-1:36:8:6:2:11 0/0:35:5:5:0:19:26.32%:10:2.3166E-2:35:14:6:8:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:38:7:5:2:16:43.75%:24:3.3988E-3:35:9:3:6:17 0/0:39:4:4:0:12:33.33%:4:4.6584E-2:34:8:3:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:3:3:0:13:23.08%:9:1.1E-1:36:10:5:5:13 0/0:42:5:4:1:16:31.25%:6:2.1691E-2:36:11:7:4:16 0/0:38:4:3:1:11:36.36%:4:4.5113E-2:37:7:5:2:11 0/1:35:9:9:0:19:47.37%:32:5.667E-4:34:10:4:6:19 0/1:36:9:9:0:21:42.86%:31:6.592E-4:36:12:10:2:22 0/1:36:7:6:1:15:46.67%:25:3.1609E-3:37:8:6:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:6:5:1:13:46.15%:21:7.4534E-3:37:7:5:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:6:0:12:50%:21:6.865E-3:37:6:5:1:14 0/0:42:2:2:0:8:25%:5:2.3333E-1:40:6:4:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:41:9:8:1:12:75%:37:1.6826E-4:37:3:2:1:12 0/0:31:2:2:0:12:16.67%:10:2.3913E-1:35:10:6:4:12 0/0:34:5:5:0:15:33.33%:6:2.1073E-2:36:10:6:4:16 0/0:52:3:2:1:10:30%:4:1.0526E-1:36:7:4:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:3:0:10:30%:4:1.0526E-1:36:7:5:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:41:2:2:0:10:20%:7:2.3684E-1:35:8:5:3:11 0/1:42:6:4:2:8:75%:24:3.4965E-3:35:2:1:1:8 0/1:34:6:5:1:13:46.15%:21:7.4534E-3:35:7:5:2:13 0/0:44:3:3:0:9:33.33%:4:1.0294E-1:36:6:3:3:9 0/0:37:5:4:1:12:41.67%:3:1.8634E-2:35:7:3:4:12 0/1:36:7:7:0:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:4:4:0:10:40%:3:4.3344E-2:34:6:3:3:10 0/1:37:6:6:0:7:85.71%:26:2.331E-3:38:1:0:1:7 0/0:35:3:3:0:12:25%:6:1.087E-1:37:9:7:2:12 0/0:41:5:4:1:13:38.46%:4:1.9565E-2:37:8:5:3:13 0/0:34:2:2:0:8:25%:5:2.3333E-1:36:6:4:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 MTB_anc 1636944 . G T . PASS AC=17;AF=0.129;AN=132;ANN=T|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1286C>A|p.Ala429Asp|1286/2226|1286/2226|429/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636944G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636944G>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:5:4:1:15:33.33%:6:2.1073E-2:37:10:10:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:44:5:2:3:11:45.45%:3:1.7544E-2:33:6:1:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:43:4:3:1:12:33.33%:4:4.6584E-2:36:8:4:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:6:0:16:37.5%:20:8.837E-3:34:10:9:1:16 0/0:40:4:2:2:12:33.33%:4:4.6584E-2:35:8:7:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:36:6:4:2:9 0/0:40:5:4:1:11:45.45%:3:1.7544E-2:37:6:6:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:35:2:2:0:8:25%:5:2.3333E-1:34:6:6:0:9 0/0:33:4:4:0:13:30.77%:6:4.7826E-2:33:9:4:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:36:4:3:1:10:40%:3:4.3344E-2:36:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:1:0:7:14.29%:8:5E-1:35:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:42:4:4:0:11:36.36%:4:4.5113E-2:33:7:2:5:12 0/0:49:2:2:0:8:25%:5:2.3333E-1:34:6:3:3:9 0/1:41:6:5:1:11:54.55%:22:6.192E-3:35:5:3:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:41:5:5:0:11:45.45%:3:1.7544E-2:33:6:3:3:16 0/0:33:4:4:0:12:33.33%:4:4.6584E-2:38:8:4:4:12 0/1:36:11:10:1:21:52.38%:40:8.2399E-5:36:10:4:6:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:39:5:5:0:14:35.71%:4:2.037E-2:35:9:6:3:16 0/0:41:5:5:0:12:41.67%:3:1.7544E-2:36:6:4:2:12 0/1:35:6:5:1:11:54.55%:22:6.192E-3:35:5:4:1:12 0/0:37:3:2:1:11:27.27%:7:1.0714E-1:36:8:5:3:12 0/0:37:2:2:0:11:18.18%:10:2.381E-1:34:9:5:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:33:1:1:0:10:10%:11:5E-1:35:9:5:4:11 0/0:37:4:3:1:10:40%:3:4.3344E-2:36:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:36:6:4:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:32:2:2:0:8:25%:5:2.3333E-1:35:6:4:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:39:4:4:0:14:28.57%:6:4.8889E-2:33:10:5:5:14 0/0:48:4:4:0:12:33.33%:4:4.6584E-2:34:8:7:1:13 0/0:41:5:4:1:11:45.45%:3:1.7544E-2:34:6:5:1:12 0/0:35:2:2:0:8:25%:5:2.3333E-1:34:6:3:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:41:7:6:1:14:50%:25:2.8986E-3:34:7:5:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:6:6:0:11:54.55%:22:6.192E-3:34:5:2:3:11 0/0:32:2:2:0:16:12.5%:15:2.4194E-1:34:14:8:6:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:53:2:1:1:8:25%:5:2.3333E-1:36:6:4:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:1:1:9:22.22%:7:2.3529E-1:34:7:3:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:6:0:9:66.67%:23:4.5249E-3:35:3:3:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:1:1:0:9:11.11%:11:5E-1:34:8:4:4:9 0/0:34:3:3:0:15:20%:11:1.1207E-1:35:12:10:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:6:6:0:13:46.15%:21:7.4534E-3:36:7:6:1:13 0/1:39:7:6:1:10:70%:28:1.548E-3:33:3:1:2:10 0/0:37:3:3:0:10:30%:4:1.0526E-1:34:7:4:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:3:3:0:10:30%:4:1.0526E-1:33:7:6:1:11 0/0:41:4:4:0:19:21.05%:13:5.251E-2:35:15:8:7:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:38:7:5:2:14:50%:25:2.8986E-3:33:7:3:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:3:3:0:12:25%:6:1.087E-1:36:9:5:4:13 0/0:47:4:3:1:14:28.57%:6:4.8889E-2:34:10:7:3:16 0/0:45:4:3:1:13:30.77%:6:4.7826E-2:35:9:7:2:15 0/1:34:8:8:0:17:47.06%:28:1.3389E-3:33:9:5:4:21 0/1:34:8:8:0:22:36.36%:27:1.8042E-3:35:14:12:2:24 0/0:36:5:4:1:15:33.33%:6:2.1073E-2:36:10:8:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:5:1:12:50%:21:6.865E-3:35:6:5:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:6:6:0:14:42.86%:20:7.971E-3:34:8:6:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:44:5:4:1:12:41.67%:3:1.8634E-2:35:7:7:0:12 0/0:34:3:3:0:10:30%:4:1.0526E-1:33:7:5:2:11 0/1:42:9:8:1:13:69.23%:36:2.2883E-4:35:4:3:1:14 0/0:37:1:1:0:9:11.11%:11:5E-1:34:8:6:2:12 0/0:36:4:4:0:15:26.67%:8:4.9808E-2:35:11:8:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:3:3:0:11:27.27%:7:1.0714E-1:34:8:6:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:43:3:3:0:9:33.33%:4:1.0294E-1:36:6:5:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:32:6:5:1:13:46.15%:21:7.4534E-3:36:7:5:2:13 0/0:45:3:3:0:9:33.33%:4:1.0294E-1:34:6:3:3:9 0/0:37:5:4:1:11:45.45%:3:1.7544E-2:34:6:4:2:14 0/1:36:6:6:0:8:75%:24:3.4965E-3:35:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:2:2:0:11:18.18%:10:2.381E-1:35:9:7:2:13 0/0:41:5:4:1:12:41.67%:3:1.8634E-2:36:7:5:2:14 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:35:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 MTB_anc 1636945 . C G . PASS AC=19;AF=0.112;AN=170;ANN=G|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1285G>C|p.Ala429Pro|1285/2226|1285/2226|429/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636945C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636945C>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:5:4:1:17:29.41%:8:2.2239E-2:36:12:10:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:46:5:2:3:12:41.67%:3:1.8634E-2:35:7:1:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:43:4:3:1:12:33.33%:4:4.6584E-2:36:8:4:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:39:5:5:0:15:33.33%:6:2.1073E-2:35:10:9:1:16 0/0:39:4:2:2:12:33.33%:4:4.6584E-2:37:8:7:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:33:3:3:0:9:33.33%:4:1.0294E-1:36:6:4:2:9 0/0:39:5:4:1:11:45.45%:3:1.7544E-2:38:6:6:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:31:2:2:0:9:22.22%:7:2.3529E-1:36:7:6:1:9 0/0:31:4:4:0:14:28.57%:6:4.8889E-2:34:10:4:6:15 0/0:35:3:3:0:10:30%:4:1.0526E-1:35:7:4:3:10 0/0:34:4:3:1:10:40%:3:4.3344E-2:36:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:37:1:1:0:10:10%:11:5E-1:35:9:3:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:48:3:2:1:10:30%:4:1.0526E-1:36:7:4:3:11 0/0:40:4:4:0:11:36.36%:4:4.5113E-2:35:7:2:5:12 0/0:49:2:2:0:9:22.22%:7:2.3529E-1:36:7:3:4:9 0/1:43:6:5:1:12:50%:21:6.865E-3:36:6:3:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:52:1:1:0:7:14.29%:8:5E-1:35:6:3:3:7 0/1:38:7:7:0:15:46.67%:25:3.1609E-3:33:8:4:4:16 0/0:34:4:4:0:12:33.33%:4:4.6584E-2:39:8:4:4:12 0/1:37:11:10:1:21:52.38%:40:8.2399E-5:35:10:4:6:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:44:2:2:0:8:25%:5:2.3333E-1:37:6:4:2:9 0/0:39:4:4:0:15:26.67%:8:4.9808E-2:36:11:6:5:16 0/0:45:5:5:0:12:41.67%:3:1.8634E-2:37:7:4:3:12 0/1:34:6:5:1:12:50%:21:6.865E-3:35:6:4:2:12 0/0:37:3:2:1:12:25%:6:1.087E-1:36:9:5:4:12 0/0:37:2:2:0:13:15.38%:13:2.4E-1:34:11:5:6:13 0/0:33:4:4:0:11:36.36%:4:4.5113E-2:36:7:6:1:12 0/0:37:1:1:0:7:14.29%:8:5E-1:41:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:24:1:1:0:11:9.09%:14:5E-1:36:10:5:5:11 0/0:34:4:3:1:10:40%:3:4.3344E-2:37:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:36:7:5:2:11 0/0:34:2:2:0:8:25%:5:2.3333E-1:37:6:4:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:4:3:1:11:36.36%:4:4.5113E-2:34:7:2:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:30:2:2:0:9:22.22%:7:2.3529E-1:35:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:41:4:4:0:13:30.77%:6:4.7826E-2:36:9:5:4:14 0/0:45:4:4:0:13:30.77%:6:4.7826E-2:36:9:7:2:13 0/1:39:6:5:1:12:50%:21:6.865E-3:34:6:5:1:12 0/0:29:2:2:0:8:25%:5:2.3333E-1:37:6:3:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:41:7:6:1:15:46.67%:25:3.1609E-3:36:8:5:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:48:2:2:0:8:25%:5:2.3333E-1:35:6:2:4:8 0/0:26:1:1:0:7:14.29%:8:5E-1:35:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:6:6:0:11:54.55%:22:6.192E-3:34:5:3:2:11 0/0:35:2:2:0:15:13.33%:16:2.4138E-1:36:13:8:5:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:45:4:3:1:11:36.36%:4:4.5113E-2:35:7:4:3:11 0/0:36:3:2:1:9:33.33%:4:1.0294E-1:35:6:4:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:39:5:5:0:11:45.45%:3:1.7544E-2:35:6:2:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:47:4:2:2:10:40%:3:4.3344E-2:36:6:5:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:2:1:1:9:22.22%:7:2.3529E-1:35:7:3:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:1:0:1:9:11.11%:8:5E-1:36:7:4:3:9 0/0:33:5:5:0:17:29.41%:8:2.2239E-2:35:12:10:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:6:6:0:13:46.15%:21:7.4534E-3:37:7:6:1:13 0/1:40:6:5:1:10:60%:22:5.418E-3:34:4:1:3:11 0/0:37:3:3:0:11:27.27%:7:1.0714E-1:35:8:4:4:11 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:41:6:2:4:9 0/0:34:3:3:0:11:27.27%:7:1.0714E-1:35:8:6:2:11 0/0:40:5:5:0:22:22.73%:12:2.4248E-2:35:17:8:9:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:8:6:2:17:47.06%:28:1.3389E-3:36:9:3:6:18 0/0:41:3:3:0:12:25%:6:1.087E-1:35:9:4:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:3:0:13:23.08%:9:1.1E-1:36:10:5:5:13 0/0:43:5:4:1:16:31.25%:6:2.1691E-2:35:11:7:4:17 0/0:43:4:3:1:15:26.67%:8:4.9808E-2:35:11:7:4:15 0/1:34:9:9:0:20:45%:32:6.1425E-4:35:11:5:6:20 0/1:33:9:9:0:24:37.5%:31:7.7962E-4:36:15:13:2:24 0/1:37:6:5:1:18:33.33%:20:9.5308E-3:36:12:10:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:6:5:1:15:40%:20:8.4291E-3:36:9:5:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:6:0:15:40%:20:8.4291E-3:35:9:6:3:15 0/0:42:3:3:0:9:33.33%:4:1.0294E-1:40:6:4:2:9 0/0:42:5:4:1:12:41.67%:3:1.8634E-2:35:7:7:0:12 0/0:36:3:3:0:11:27.27%:7:1.0714E-1:35:8:6:2:11 0/1:45:7:6:1:11:63.64%:27:1.935E-3:36:4:3:1:14 0/0:31:2:2:0:12:16.67%:10:2.3913E-1:35:10:6:4:12 0/0:36:4:4:0:17:23.53%:11:5.132E-2:36:13:9:4:17 0/0:44:3:2:1:12:25%:6:1.087E-1:34:9:5:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:3:3:0:11:27.27%:7:1.0714E-1:36:8:6:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:1:1:0:7:14.29%:8:5E-1:34:6:4:2:7 0/0:35:2:2:0:8:25%:5:2.3333E-1:34:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:6:6:0:11:54.55%:22:6.192E-3:36:5:3:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:33:3:3:0:11:27.27%:7:1.0714E-1:36:8:5:3:11 0/1:41:6:4:2:9:66.67%:23:4.5249E-3:35:3:2:1:9 0/1:30:6:5:1:13:46.15%:21:7.4534E-3:36:7:5:2:13 0/0:43:3:3:0:9:33.33%:4:1.0294E-1:35:6:3:3:9 0/0:37:4:3:1:13:30.77%:6:4.7826E-2:36:9:4:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:31:3:3:0:14:21.43%:9:1.1111E-1:36:11:7:4:14 0/0:41:5:4:1:14:35.71%:4:2.037E-2:37:9:5:4:14 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:36:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 MTB_anc 1636946 . C A . PASS AC=22;AF=0.133;AN=166;ANN=A|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1284G>T|p.Gly428Gly|1284/2226|1284/2226|428/741||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636946C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636946C>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:5:4:1:16:31.25%:6:2.1691E-2:36:11:10:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:46:5:2:3:11:45.45%:3:1.7544E-2:35:6:1:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:42:4:3:1:12:33.33%:4:4.6584E-2:36:8:4:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:6:6:0:16:37.5%:20:8.837E-3:36:10:9:1:16 0/0:39:5:3:2:14:35.71%:4:2.037E-2:37:9:8:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:42:4:3:1:10:40%:3:4.3344E-2:38:6:6:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:1:1:0:8:12.5%:8:5E-1:37:7:6:1:9 0/0:35:4:4:0:14:28.57%:6:4.8889E-2:34:10:4:6:15 0/0:35:3:3:0:9:33.33%:4:1.0294E-1:35:6:4:2:9 0/0:37:4:3:1:10:40%:3:4.3344E-2:36:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:38:1:1:0:10:10%:11:5E-1:34:9:3:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:48:4:3:1:10:40%:3:4.3344E-2:35:6:3:3:11 0/0:42:4:4:0:10:40%:3:4.3344E-2:34:6:2:4:12 0/0:49:2:2:0:11:18.18%:10:2.381E-1:34:9:5:4:11 0/1:44:6:5:1:12:50%:21:6.865E-3:36:6:3:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:60:1:1:0:7:14.29%:8:5E-1:33:6:3:3:7 0/1:38:7:7:0:13:53.85%:25:2.6087E-3:35:6:4:2:16 0/0:36:4:4:0:12:33.33%:4:4.6584E-2:37:8:5:3:13 0/1:38:10:9:1:20:50%:36:2.1796E-4:34:10:4:6:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:42:3:2:1:9:33.33%:4:1.0294E-1:36:6:4:2:10 0/0:40:5:5:0:17:29.41%:8:2.2239E-2:35:12:7:5:17 0/0:46:5:5:0:12:41.67%:3:1.8634E-2:36:7:4:3:12 0/0:35:5:4:1:11:45.45%:3:1.7544E-2:35:6:4:2:12 0/0:36:3:2:1:12:25%:6:1.087E-1:36:9:5:4:12 0/0:37:2:2:0:11:18.18%:10:2.381E-1:35:9:5:4:11 0/0:36:4:4:0:12:33.33%:4:4.6584E-2:35:8:6:2:12 0/0:37:1:1:0:8:12.5%:8:5E-1:39:7:3:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:32:1:1:0:11:9.09%:14:5E-1:35:10:5:5:11 0/0:37:4:3:1:10:40%:3:4.3344E-2:37:6:6:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:4:4:0:10:40%:3:4.3344E-2:37:6:5:1:11 0/0:36:2:2:0:8:25%:5:2.3333E-1:36:6:4:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:5:4:1:12:41.67%:3:1.8634E-2:34:7:2:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:2:2:0:8:25%:5:2.3333E-1:37:6:5:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:36:5:5:0:11:45.45%:3:1.7544E-2:35:6:2:4:11 0/0:40:4:4:0:12:33.33%:4:4.6584E-2:36:8:5:3:14 0/0:47:4:4:0:13:30.77%:6:4.7826E-2:35:9:7:2:13 0/1:39:6:5:1:11:54.55%:22:6.192E-3:36:5:5:0:12 0/0:34:2:2:0:8:25%:5:2.3333E-1:37:6:3:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:44:6:5:1:14:42.86%:20:7.971E-3:35:8:6:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:31:2:2:0:8:25%:5:2.3333E-1:35:6:2:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:33:3:3:0:16:18.75%:11:1.129E-1:35:13:8:5:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:48:4:3:1:11:36.36%:4:4.5113E-2:36:7:4:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:41:5:5:0:11:45.45%:3:1.7544E-2:35:6:2:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:47:4:2:2:10:40%:3:4.3344E-2:37:6:5:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:1:1:8:25%:5:2.3333E-1:35:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:6:0:10:60%:22:5.418E-3:36:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:6:6:0:8:75%:24:3.4965E-3:37:2:1:1:9 0/0:37:1:1:0:9:11.11%:11:5E-1:36:8:4:4:9 0/0:35:5:5:0:16:31.25%:6:2.1691E-2:36:11:10:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:6:0:13:46.15%:21:7.4534E-3:38:7:6:1:13 0/1:39:7:6:1:11:63.64%:27:1.935E-3:35:4:2:2:12 0/0:37:3:3:0:11:27.27%:7:1.0714E-1:34:8:4:4:11 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:36:6:2:4:9 0/0:37:3:3:0:10:30%:4:1.0526E-1:36:7:6:1:11 0/0:43:4:4:0:18:22.22%:10:5.1948E-2:35:14:8:6:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:38:8:6:2:16:50%:29:1.2236E-3:35:8:3:5:18 0/0:44:4:4:0:12:33.33%:4:4.6584E-2:34:8:4:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:3:0:13:23.08%:9:1.1E-1:36:10:5:5:13 0/0:46:5:4:1:16:31.25%:6:2.1691E-2:36:11:7:4:17 0/0:45:4:3:1:13:30.77%:6:4.7826E-2:35:9:6:3:15 0/1:36:8:8:0:17:47.06%:28:1.3389E-3:34:9:5:4:20 0/1:36:9:9:0:24:37.5%:31:7.7962E-4:36:15:13:2:24 0/1:40:6:5:1:17:35.29%:20:9.2021E-3:36:11:10:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:41:6:5:1:14:42.86%:20:7.971E-3:37:8:5:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:6:0:13:46.15%:21:7.4534E-3:36:7:5:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:45:5:4:1:12:41.67%:3:1.8634E-2:35:7:7:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:40:9:8:1:14:64.29%:35:2.8986E-4:35:5:3:2:14 0/0:36:2:2:0:11:18.18%:10:2.381E-1:35:9:6:3:11 0/0:37:4:4:0:15:26.67%:8:4.9808E-2:36:11:9:2:17 0/0:44:3:2:1:11:27.27%:7:1.0714E-1:33:8:5:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:3:3:0:10:30%:4:1.0526E-1:36:7:5:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:33:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:6:0:11:54.55%:22:6.192E-3:35:5:3:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:43:3:3:0:11:27.27%:7:1.0714E-1:36:8:5:3:11 0/1:43:6:4:2:9:66.67%:23:4.5249E-3:35:3:2:1:9 0/1:35:6:5:1:13:46.15%:21:7.4534E-3:36:7:5:2:13 0/0:44:3:3:0:9:33.33%:4:1.0294E-1:33:6:3:3:9 0/1:36:6:4:2:15:40%:20:8.4291E-3:35:9:4:5:15 0/1:36:6:6:0:8:75%:24:3.4965E-3:36:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:3:3:0:14:21.43%:9:1.1111E-1:35:11:7:4:14 0/0:41:5:4:1:12:41.67%:3:1.8634E-2:37:7:5:2:14 0/0:33:2:2:0:9:22.22%:7:2.3529E-1:35:7:5:2:9 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:35:6:5:1:10 MTB_anc 1636980 . G T . PASS AC=13;AF=0.072;AN=180;ANN=T|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1250C>A|p.Pro417His|1250/2226|1250/2226|417/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636980G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636980G>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:6:3:3:21:28.57%:9:1.0344E-2:36:15:13:2:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:2:1:9:33.33%:4:1.0294E-1:37:6:2:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:36:4:4:0:12:33.33%:4:4.6584E-2:34:8:8:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:3:0:10:30%:4:1.0526E-1:36:7:4:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:7:6:1:18:38.89%:24:3.8123E-3:33:11:11:0:18 0/0:34:4:2:2:12:33.33%:4:4.6584E-2:36:8:8:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:4:4:0:11:36.36%:4:4.5113E-2:33:7:5:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:34:5:4:1:14:35.71%:4:2.037E-2:37:9:8:1:14 0/0:36:2:2:0:9:22.22%:7:2.3529E-1:35:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:2:2:0:10:20%:7:2.3684E-1:36:8:7:1:11 0/0:32:3:3:0:12:25%:6:1.087E-1:34:9:4:5:13 0/0:35:1:1:0:8:12.5%:8:5E-1:36:7:6:1:9 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:37:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:37:1:1:0:8:12.5%:8:5E-1:36:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:4:3:1:13:30.77%:6:4.7826E-2:34:9:7:2:13 0/0:37:3:2:1:11:27.27%:7:1.0714E-1:36:8:6:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:2:1:1:8:25%:5:2.3333E-1:36:6:5:1:8 0/1:35:6:5:1:16:37.5%:20:8.837E-3:35:10:8:2:16 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:36:6:5:1:9 0/1:40:6:6:0:14:42.86%:20:7.971E-3:35:8:5:3:14 0/0:36:3:1:2:9:33.33%:4:1.0294E-1:34:6:6:0:10 0/0:33:3:1:2:12:25%:6:1.087E-1:36:9:7:2:12 0/0:35:5:4:1:13:38.46%:4:1.9565E-2:38:8:7:1:14 0/0:37:2:2:0:8:25%:5:2.3333E-1:36:6:4:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:2:1:16:18.75%:11:1.129E-1:36:13:9:4:17 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:34:7:6:1:11 0/0:33:2:1:1:10:20%:7:2.3684E-1:36:8:5:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:1:1:9:22.22%:7:2.3529E-1:37:7:4:3:9 0/0:36:5:3:2:14:35.71%:4:2.037E-2:36:9:9:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:38:6:5:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:4:3:1:11:36.36%:4:4.5113E-2:34:7:3:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:4:1:3:13:30.77%:6:4.7826E-2:35:9:8:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:4:4:0:10:40%:3:4.3344E-2:35:6:5:1:10 0/0:38:5:4:1:12:41.67%:3:1.8634E-2:35:7:6:1:12 0/0:37:4:2:2:14:28.57%:6:4.8889E-2:36:10:8:2:18 0/0:37:4:3:1:14:28.57%:6:4.8889E-2:34:10:9:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:5:5:0:12:41.67%:3:1.8634E-2:37:7:5:2:12 0/0:40:5:3:2:16:31.25%:6:2.1691E-2:35:11:10:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:4:2:2:12:33.33%:4:4.6584E-2:34:8:8:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:7:5:2:14:50%:25:2.8986E-3:36:7:7:0:14 0/0:37:2:2:0:16:12.5%:15:2.4194E-1:35:14:11:3:18 0/0:37:1:1:0:8:12.5%:8:5E-1:36:7:7:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:33:3:1:2:11:27.27%:7:1.0714E-1:37:8:5:3:12 0/0:37:2:2:0:10:20%:7:2.3684E-1:34:8:5:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:4:4:0:11:36.36%:4:4.5113E-2:37:7:6:1:11 0/0:37:1:1:0:8:12.5%:8:5E-1:35:7:5:2:8 0/0:45:3:2:1:11:27.27%:7:1.0714E-1:36:8:7:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:1:0:9:11.11%:11:5E-1:35:8:6:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:8:5:3:11:72.73%:32:5.16E-4:36:3:2:1:11 0/0:38:1:0:1:9:11.11%:11:5E-1:35:8:5:3:10 0/0:33:5:4:1:18:27.78%:8:2.2727E-2:35:13:13:0:19 0/0:36:2:2:0:8:25%:5:2.3333E-1:36:6:6:0:8 0/0:36:3:3:0:12:25%:6:1.087E-1:36:9:9:0:13 0/1:34:6:6:0:16:37.5%:20:8.837E-3:35:10:7:3:16 0/0:37:1:1:0:9:11.11%:11:5E-1:33:8:5:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:4:3:1:14:28.57%:6:4.8889E-2:35:10:9:1:14 0/0:41:5:4:1:17:29.41%:8:2.2239E-2:35:12:10:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:40:6:4:2:12:50%:21:6.865E-3:35:6:3:3:12 0/0:42:3:3:0:14:21.43%:9:1.1111E-1:35:11:7:4:14 0/0:38:1:0:1:7:14.29%:8:5E-1:35:6:5:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:4:3:1:14:28.57%:6:4.8889E-2:34:10:9:1:14 0/0:34:5:3:2:16:31.25%:6:2.1691E-2:34:11:10:1:16 0/0:42:4:3:1:14:28.57%:6:4.8889E-2:36:10:7:3:15 0/1:36:10:8:2:21:47.62%:36:2.3971E-4:36:11:6:5:21 0/1:36:8:8:0:21:38.1%:27:1.7241E-3:36:13:13:0:22 0/0:34:3:3:0:16:18.75%:11:1.129E-1:36:13:13:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:4:4:0:14:28.57%:6:4.8889E-2:36:10:5:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:42:4:4:0:17:23.53%:11:5.132E-2:34:13:11:2:18 0/0:35:3:3:0:9:33.33%:4:1.0294E-1:41:6:5:1:10 0/0:35:3:3:0:13:23.08%:9:1.1E-1:36:10:10:0:13 0/0:37:3:3:0:11:27.27%:7:1.0714E-1:35:8:7:1:11 0/1:39:8:7:1:13:61.54%:30:8.238E-4:35:5:4:1:13 0/0:36:2:1:1:13:15.38%:13:2.4E-1:36:11:9:2:13 0/0:36:4:4:0:17:23.53%:11:5.132E-2:36:13:9:4:18 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:36:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:37:2:2:0:8:25%:5:2.3333E-1:35:6:3:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:2:2:0:8:25%:5:2.3333E-1:34:6:4:2:8 0/1:37:6:3:3:17:35.29%:20:9.2021E-3:36:11:10:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:1:1:0:7:14.29%:8:5E-1:34:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:37:6:4:2:9:66.67%:23:4.5249E-3:34:3:2:1:9 0/0:34:2:0:2:11:18.18%:10:2.381E-1:36:9:7:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:48:2:1:1:10:20%:7:2.3684E-1:36:8:8:0:11 0/0:35:1:1:0:7:14.29%:8:5E-1:35:6:4:2:7 0/0:36:5:3:2:11:45.45%:3:1.7544E-2:35:6:5:1:11 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:35:7:6:1:11 0/0:31:2:2:0:11:18.18%:10:2.381E-1:36:9:9:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:2:2:0:12:16.67%:10:2.3913E-1:36:10:8:2:12 0/1:38:6:5:1:16:37.5%:20:8.837E-3:36:10:8:2:16 0/0:35:2:1:1:9:22.22%:7:2.3529E-1:34:7:7:0:10 0/0:37:4:4:0:11:36.36%:4:4.5113E-2:37:7:6:1:11 MTB_anc 1636981 . G T . PASS AC=11;AF=0.064;AN=172;ANN=T|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1249C>A|p.Pro417Thr|1249/2226|1249/2226|417/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636981G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636981G>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:4:3:1:18:22.22%:10:5.1948E-2:35:14:12:2:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:2:1:9:33.33%:4:1.0294E-1:35:6:2:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:36:5:4:1:13:38.46%:4:1.9565E-2:35:8:8:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:3:0:10:30%:4:1.0526E-1:36:7:4:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:6:5:1:17:35.29%:20:9.2021E-3:34:11:11:0:18 0/0:34:3:2:1:11:27.27%:7:1.0714E-1:35:8:8:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:4:4:0:11:36.36%:4:4.5113E-2:34:7:5:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:34:5:4:1:14:35.71%:4:2.037E-2:37:9:8:1:14 0/0:36:2:2:0:9:22.22%:7:2.3529E-1:35:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:2:2:0:10:20%:7:2.3684E-1:36:8:7:1:11 0/0:36:3:3:0:13:23.08%:9:1.1E-1:33:10:5:5:13 0/0:36:2:2:0:9:22.22%:7:2.3529E-1:36:7:6:1:9 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:37:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:1:1:0:7:14.29%:8:5E-1:37:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:3:0:11:27.27%:7:1.0714E-1:35:8:6:2:12 0/0:37:3:2:1:10:30%:4:1.0526E-1:37:7:6:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:30:1:0:1:7:14.29%:8:5E-1:35:6:5:1:7 0/1:36:6:5:1:16:37.5%:20:8.837E-3:35:10:8:2:16 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:36:6:5:1:9 0/1:40:6:6:0:13:46.15%:21:7.4534E-3:36:7:5:2:14 0/0:35:3:1:2:10:30%:4:1.0526E-1:35:7:7:0:10 0/0:37:1:1:0:10:10%:11:5E-1:36:9:7:2:12 0/0:36:4:4:0:13:30.77%:6:4.7826E-2:37:9:8:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:36:2:2:0:8:25%:5:2.3333E-1:33:6:5:1:8 0/0:36:3:2:1:16:18.75%:11:1.129E-1:35:13:9:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:35:2:1:1:10:20%:7:2.3684E-1:36:8:5:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:30:1:0:1:8:12.5%:8:5E-1:37:7:5:2:8 0/0:37:4:2:2:13:30.77%:6:4.7826E-2:34:9:9:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:35:3:3:0:9:33.33%:4:1.0294E-1:36:6:5:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:1:2:11:27.27%:7:1.0714E-1:36:8:7:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:4:4:0:10:40%:3:4.3344E-2:35:6:5:1:10 0/0:41:5:4:1:11:45.45%:3:1.7544E-2:36:6:6:0:11 0/0:36:5:3:2:17:29.41%:8:2.2239E-2:35:12:10:2:18 0/0:36:4:3:1:15:26.67%:8:4.9808E-2:35:11:10:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:5:5:0:12:41.67%:3:1.8634E-2:36:7:5:2:12 0/0:43:4:3:1:15:26.67%:8:4.9808E-2:35:11:10:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:33:4:2:2:12:33.33%:4:4.6584E-2:34:8:8:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:6:4:2:12:50%:21:6.865E-3:36:6:6:0:14 0/0:36:2:2:0:17:11.76%:18:2.4242E-1:35:15:13:2:17 0/0:37:1:1:0:8:12.5%:8:5E-1:37:7:7:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:32:4:2:2:12:33.33%:4:4.6584E-2:36:8:5:3:12 0/0:37:2:2:0:10:20%:7:2.3684E-1:34:8:5:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:36:7:6:1:11 0/0:37:1:1:0:8:12.5%:8:5E-1:36:7:5:2:8 0/0:44:3:2:1:11:27.27%:7:1.0714E-1:36:8:7:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:1:1:0:9:11.11%:11:5E-1:36:8:6:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:7:4:3:10:70%:28:1.548E-3:36:3:2:1:11 0/0:38:1:0:1:10:10%:11:5E-1:35:9:5:4:10 0/0:34:5:5:0:17:29.41%:8:2.2239E-2:36:12:12:0:19 0/0:37:2:2:0:8:25%:5:2.3333E-1:34:6:6:0:8 0/0:36:4:4:0:13:30.77%:6:4.7826E-2:37:9:9:0:13 0/0:35:5:5:0:15:33.33%:6:2.1073E-2:36:10:7:3:16 0/0:37:1:1:0:8:12.5%:8:5E-1:35:7:4:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:3:2:1:13:23.08%:9:1.1E-1:35:10:9:1:14 0/0:41:5:4:1:18:27.78%:8:2.2727E-2:35:13:11:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:40:6:4:2:12:50%:21:6.865E-3:35:6:3:3:12 0/0:44:3:3:0:13:23.08%:9:1.1E-1:35:10:7:3:14 0/0:34:1:0:1:7:14.29%:8:5E-1:35:6:5:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:3:3:0:12:25%:6:1.087E-1:35:9:8:1:14 0/0:34:5:3:2:14:35.71%:4:2.037E-2:36:9:8:1:16 0/0:42:4:3:1:14:28.57%:6:4.8889E-2:35:10:7:3:15 0/1:35:10:8:2:21:47.62%:36:2.3971E-4:36:11:6:5:21 0/1:35:8:8:0:20:40%:27:1.638E-3:36:12:12:0:22 0/0:34:3:3:0:17:17.65%:14:1.1364E-1:36:14:14:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:4:4:0:14:28.57%:6:4.8889E-2:35:10:5:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:39:5:5:0:16:31.25%:6:2.1691E-2:34:11:10:1:18 0/0:33:2:1:1:8:25%:5:2.3333E-1:40:6:5:1:10 0/0:37:3:3:0:13:23.08%:9:1.1E-1:36:10:10:0:13 0/0:36:3:3:0:11:27.27%:7:1.0714E-1:34:8:7:1:11 0/1:39:8:7:1:13:61.54%:30:8.238E-4:35:5:4:1:13 0/0:34:2:1:1:13:15.38%:13:2.4E-1:35:11:9:2:13 0/0:37:4:4:0:17:23.53%:11:5.132E-2:36:13:9:4:18 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:35:7:5:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:2:2:0:8:25%:5:2.3333E-1:35:6:3:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:2:2:0:8:25%:5:2.3333E-1:33:6:4:2:8 0/0:37:5:3:2:13:38.46%:4:1.9565E-2:35:8:8:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:1:1:0:7:14.29%:8:5E-1:35:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:36:6:4:2:8:75%:24:3.4965E-3:32:2:1:1:9 0/0:38:1:0:1:10:10%:11:5E-1:35:9:7:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:3:2:1:11:27.27%:7:1.0714E-1:35:8:8:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:37:4:4:0:11:36.36%:4:4.5113E-2:36:7:6:1:11 0/0:34:2:2:0:11:18.18%:10:2.381E-1:37:9:9:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:2:2:0:12:16.67%:10:2.3913E-1:35:10:8:2:12 0/1:38:6:5:1:16:37.5%:20:8.837E-3:36:10:8:2:16 0/0:35:2:1:1:10:20%:7:2.3684E-1:36:8:8:0:10 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:37:7:6:1:11 MTB_anc 1636983 . C G . PASS AC=8;AF=0.047;AN=170;ANN=G|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1247G>C|p.Gly416Ala|1247/2226|1247/2226|416/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636983C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636983C>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:5:2:3:20:25%:10:2.3562E-2:36:15:13:2:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:2:1:9:33.33%:4:1.0294E-1:35:6:2:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:35:5:4:1:14:35.71%:4:2.037E-2:35:9:9:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:3:3:0:10:30%:4:1.0526E-1:36:7:4:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:6:6:0:17:35.29%:20:9.2021E-3:35:11:10:1:19 0/0:34:4:2:2:13:30.77%:6:4.7826E-2:36:9:9:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:32:4:4:0:11:36.36%:4:4.5113E-2:36:7:5:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:36:4:3:1:13:30.77%:6:4.7826E-2:37:9:8:1:14 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:35:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:2:2:0:10:20%:7:2.3684E-1:37:8:7:1:10 0/0:37:3:3:0:10:30%:4:1.0526E-1:35:7:5:2:10 0/0:25:2:2:0:8:25%:5:2.3333E-1:36:6:6:0:8 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:37:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:1:1:0:7:14.29%:8:5E-1:37:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:2:2:0:10:20%:7:2.3684E-1:36:8:7:1:11 0/0:37:3:2:1:10:30%:4:1.0526E-1:36:7:6:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:1:0:1:7:14.29%:8:5E-1:36:6:5:1:7 0/1:33:6:5:1:16:37.5%:20:8.837E-3:35:10:8:2:16 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:36:6:5:1:9 0/1:40:6:6:0:13:46.15%:21:7.4534E-3:36:7:5:2:13 0/0:35:3:1:2:10:30%:4:1.0526E-1:36:7:7:0:10 0/0:36:3:1:2:12:25%:6:1.087E-1:37:9:7:2:12 0/0:35:4:3:1:13:30.77%:6:4.7826E-2:37:9:8:1:14 0/0:37:2:2:0:9:22.22%:7:2.3529E-1:34:7:5:2:9 0/0:34:3:2:1:9:33.33%:4:1.0294E-1:38:6:6:0:11 0/0:34:2:2:0:8:25%:5:2.3333E-1:35:6:5:1:8 0/0:32:3:2:1:17:17.65%:14:1.1364E-1:35:14:10:4:17 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:36:7:6:1:11 0/0:37:2:1:1:10:20%:7:2.3684E-1:36:8:5:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:1:0:1:8:12.5%:8:5E-1:37:7:5:2:8 0/0:37:4:2:2:14:28.57%:6:4.8889E-2:35:10:10:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:37:3:3:0:9:33.33%:4:1.0294E-1:38:6:5:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:4:1:3:13:30.77%:6:4.7826E-2:36:9:8:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:40:5:4:1:11:45.45%:3:1.7544E-2:37:6:6:0:11 0/0:35:5:3:2:18:27.78%:8:2.2727E-2:34:13:11:2:18 0/0:35:4:3:1:15:26.67%:8:4.9808E-2:35:11:10:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:5:5:0:12:41.67%:3:1.8634E-2:36:7:5:2:12 0/0:40:5:3:2:17:29.41%:8:2.2239E-2:37:12:11:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:33:3:1:2:11:27.27%:7:1.0714E-1:35:8:8:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:5:1:13:46.15%:21:7.4534E-3:36:7:7:0:14 0/0:30:2:2:0:16:12.5%:15:2.4194E-1:36:14:12:2:17 0/0:37:1:1:0:8:12.5%:8:5E-1:37:7:7:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:3:1:2:11:27.27%:7:1.0714E-1:36:8:5:3:12 0/0:37:2:2:0:10:20%:7:2.3684E-1:35:8:5:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:3:0:10:30%:4:1.0526E-1:36:7:6:1:11 0/0:37:1:1:0:7:14.29%:8:5E-1:36:6:5:1:7 0/0:43:3:2:1:11:27.27%:7:1.0714E-1:37:8:7:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:1:0:9:11.11%:11:5E-1:36:8:6:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:7:4:3:10:70%:28:1.548E-3:36:3:2:1:11 0/0:36:1:0:1:10:10%:11:5E-1:35:9:5:4:10 0/0:33:4:4:0:17:23.53%:11:5.132E-2:36:13:13:0:19 0/0:37:1:1:0:7:14.29%:8:5E-1:38:6:6:0:8 0/0:35:3:3:0:12:25%:6:1.087E-1:37:9:9:0:13 0/0:37:4:4:0:14:28.57%:6:4.8889E-2:36:10:7:3:16 0/0:37:1:1:0:8:12.5%:8:5E-1:35:7:4:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:2:1:13:23.08%:9:1.1E-1:35:10:9:1:15 0/0:41:5:4:1:18:27.78%:8:2.2727E-2:36:13:11:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:44:3:3:0:14:21.43%:9:1.1111E-1:34:11:7:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:4:3:1:14:28.57%:6:4.8889E-2:36:10:9:1:14 0/0:32:5:3:2:16:31.25%:6:2.1691E-2:35:11:10:1:16 0/0:42:3:2:1:14:21.43%:9:1.1111E-1:35:11:8:3:15 0/1:34:9:8:1:19:47.37%:32:5.667E-4:34:10:6:4:21 0/1:37:8:8:0:22:36.36%:27:1.8042E-3:37:14:14:0:22 0/0:30:2:2:0:16:12.5%:15:2.4194E-1:36:14:14:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:5:5:0:13:38.46%:4:1.9565E-2:37:8:5:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:5:5:0:18:27.78%:8:2.2727E-2:35:13:11:2:18 0/0:36:4:3:1:10:40%:3:4.3344E-2:41:6:5:1:10 0/0:38:2:2:0:12:16.67%:10:2.3913E-1:36:10:10:0:13 0/0:32:1:1:0:9:11.11%:11:5E-1:35:8:7:1:11 0/1:39:8:7:1:13:61.54%:30:8.238E-4:36:5:4:1:13 0/0:33:2:1:1:13:15.38%:13:2.4E-1:35:11:9:2:13 0/0:36:4:4:0:18:22.22%:10:5.1948E-2:35:14:10:4:18 0/0:36:2:2:0:8:25%:5:2.3333E-1:36:6:5:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:2:2:0:8:25%:5:2.3333E-1:35:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:2:2:0:8:25%:5:2.3333E-1:35:6:4:2:8 0/0:35:5:3:2:14:35.71%:4:2.037E-2:35:9:9:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:2:0:2:11:18.18%:10:2.381E-1:36:9:7:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:48:2:1:1:12:16.67%:10:2.3913E-1:35:10:10:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:2:2:11:36.36%:4:4.5113E-2:37:7:6:1:12 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:36:7:6:1:11 0/0:37:2:2:0:11:18.18%:10:2.381E-1:37:9:9:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:2:2:0:12:16.67%:10:2.3913E-1:36:10:8:2:12 0/0:42:4:3:1:13:30.77%:6:4.7826E-2:36:9:8:1:15 0/0:37:2:1:1:10:20%:7:2.3684E-1:36:8:8:0:10 0/0:37:3:3:0:10:30%:4:1.0526E-1:37:7:6:1:11 MTB_anc 1636991 . C T . PASS AC=9;AF=0.052;AN=172;ANN=T|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1239G>A|p.Gly413Gly|1239/2226|1239/2226|413/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636991C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636991C>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:34:5:3:2:19:26.32%:10:2.3166E-2:36:14:13:1:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:3:2:1:9:33.33%:4:1.0294E-1:35:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:32:5:4:1:15:33.33%:6:2.1073E-2:36:10:10:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:3:1:11:36.36%:4:4.5113E-2:35:7:5:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:34:5:3:2:15:33.33%:6:2.1073E-2:35:10:9:1:19 0/0:30:2:1:1:11:18.18%:10:2.381E-1:37:9:9:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:34:4:4:0:12:33.33%:4:4.6584E-2:36:8:7:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:35:4:3:1:14:28.57%:6:4.8889E-2:37:10:9:1:17 0/0:33:2:2:0:9:22.22%:7:2.3529E-1:37:7:7:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:2:2:0:12:16.67%:10:2.3913E-1:36:10:9:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:31:1:1:0:7:14.29%:8:5E-1:36:6:6:0:8 0/0:37:1:1:0:9:11.11%:11:5E-1:37:8:8:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:2:2:0:9:22.22%:7:2.3529E-1:37:7:7:0:10 0/0:36:3:2:1:10:30%:4:1.0526E-1:37:7:6:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:32:1:0:1:8:12.5%:8:5E-1:36:7:6:1:8 0/1:34:6:5:1:15:40%:20:8.4291E-3:36:9:9:0:16 0/0:35:3:3:0:9:33.33%:4:1.0294E-1:35:6:6:0:9 0/0:36:5:5:0:13:38.46%:4:1.9565E-2:36:8:6:2:14 0/0:35:2:1:1:10:20%:7:2.3684E-1:36:8:8:0:11 0/0:33:2:1:1:10:20%:7:2.3684E-1:37:8:7:1:12 0/0:35:5:4:1:14:35.71%:4:2.037E-2:36:9:8:1:14 0/0:28:2:2:0:9:22.22%:7:2.3529E-1:36:7:6:1:9 0/0:33:4:3:1:10:40%:3:4.3344E-2:37:6:6:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:2:2:0:16:12.5%:15:2.4194E-1:36:14:11:3:17 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:36:7:7:0:11 0/0:33:2:1:1:9:22.22%:7:2.3529E-1:36:7:5:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:1:0:1:8:12.5%:8:5E-1:37:7:5:2:8 0/0:32:3:2:1:13:23.08%:9:1.1E-1:37:10:10:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:35:3:3:0:9:33.33%:4:1.0294E-1:36:6:5:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:31:3:1:2:12:25%:6:1.087E-1:35:9:8:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:33:5:4:1:11:45.45%:3:1.7544E-2:37:6:6:0:11 0/0:34:3:1:2:13:23.08%:9:1.1E-1:36:10:10:0:15 0/0:35:3:2:1:14:21.43%:9:1.1111E-1:36:11:10:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:4:0:10:40%:3:4.3344E-2:37:6:5:1:11 0/0:39:5:3:2:18:27.78%:8:2.2727E-2:36:13:13:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:3:2:1:13:23.08%:9:1.1E-1:36:10:10:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:37:7:6:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:32:5:4:1:12:41.67%:3:1.8634E-2:36:7:7:0:14 0/0:34:1:1:0:14:7.14%:17:5E-1:37:13:12:1:14 0/0:37:1:1:0:9:11.11%:11:5E-1:37:8:8:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:2:0:2:11:18.18%:10:2.381E-1:36:9:6:3:13 0/0:34:2:2:0:8:25%:5:2.3333E-1:36:6:5:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:32:4:4:0:12:33.33%:4:4.6584E-2:36:8:7:1:12 0/0:28:1:1:0:7:14.29%:8:5E-1:34:6:5:1:7 0/0:38:4:2:2:11:36.36%:4:4.5113E-2:37:7:7:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:1:0:9:11.11%:11:5E-1:36:8:6:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:2:2:0:8:25%:5:2.3333E-1:37:6:6:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:7:5:2:10:70%:28:1.548E-3:36:3:3:0:11 0/0:38:1:0:1:12:8.33%:14:5E-1:36:11:6:5:12 0/0:32:5:4:1:19:26.32%:10:2.3166E-2:36:14:14:0:21 0/0:35:2:2:0:8:25%:5:2.3333E-1:37:6:6:0:8 0/0:32:3:3:0:12:25%:6:1.087E-1:37:9:9:0:13 0/1:32:6:6:0:15:40%:20:8.4291E-3:37:9:7:2:15 0/0:37:1:1:0:7:14.29%:8:5E-1:37:6:5:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:5:3:2:18:27.78%:8:2.2727E-2:35:13:12:1:18 0/0:41:4:3:1:15:26.67%:8:4.9808E-2:37:11:11:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:34:6:4:2:9:66.67%:23:4.5249E-3:36:3:3:0:9 0/0:41:4:3:1:13:30.77%:6:4.7826E-2:36:9:8:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:2:2:0:8:25%:5:2.3333E-1:37:6:6:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:4:3:1:14:28.57%:6:4.8889E-2:36:10:9:1:14 0/0:32:5:3:2:15:33.33%:6:2.1073E-2:37:10:9:1:15 0/0:43:3:2:1:13:23.08%:9:1.1E-1:36:10:10:0:15 0/1:34:8:7:1:17:47.06%:28:1.3389E-3:35:9:7:2:20 0/1:34:8:8:0:22:36.36%:27:1.8042E-3:36:14:14:0:22 0/0:34:3:3:0:18:16.67%:14:1.1429E-1:37:15:15:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:4:4:0:11:36.36%:4:4.5113E-2:37:7:5:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:4:4:0:15:26.67%:8:4.9808E-2:35:11:11:0:17 0/0:34:2:2:0:8:25%:5:2.3333E-1:41:6:5:1:11 0/0:36:2:2:0:13:15.38%:13:2.4E-1:36:11:11:0:14 0/0:29:3:3:0:11:27.27%:7:1.0714E-1:36:8:7:1:11 0/1:37:8:7:1:12:66.67%:31:6.7304E-4:37:4:4:0:12 0/0:34:2:1:1:12:16.67%:10:2.3913E-1:37:10:9:1:12 0/0:37:4:4:0:15:26.67%:8:4.9808E-2:35:11:9:2:15 0/0:33:2:2:0:9:22.22%:7:2.3529E-1:34:7:6:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:36:3:2:1:9:33.33%:4:1.0294E-1:34:6:5:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:2:1:11:27.27%:7:1.0714E-1:36:8:8:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:32:6:4:2:8:75%:24:3.4965E-3:35:2:2:0:8 0/0:35:2:0:2:11:18.18%:10:2.381E-1:35:9:8:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:42:3:2:1:13:23.08%:9:1.1E-1:36:10:10:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:4:3:1:10:40%:3:4.3344E-2:37:6:6:0:11 0/0:37:4:4:0:10:40%:3:4.3344E-2:38:6:6:0:10 0/0:37:2:2:0:13:15.38%:13:2.4E-1:37:11:11:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:33:2:2:0:11:18.18%:10:2.381E-1:36:9:8:1:11 0/1:38:6:5:1:15:40%:20:8.4291E-3:37:9:9:0:15 0/0:37:2:1:1:10:20%:7:2.3684E-1:37:8:8:0:10 0/0:36:3:3:0:12:25%:6:1.087E-1:36:9:8:1:13 MTB_anc 1636996 . G C . PASS AC=78;AF=0.488;AN=160;ANN=C|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1234C>G|p.Arg412Gly|1234/2226|1234/2226|412/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1636996G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1636996G>C||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:13:13:0:19:68.42%:53:5.0106E-6:37:6:3:3:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:10:10:0:15:66.67%:40:9.995E-5:37:5:4:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:5:2:11:63.64%:27:1.935E-3:36:4:3:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:11:10:1:18:61.11%:43:4.3258E-5:36:6:4:2:19 0/1:37:9:9:0:13:69.23%:36:2.2883E-4:35:4:2:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:8:7:1:12:66.67%:31:6.7304E-4:34:4:4:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:10:9:1:17:58.82%:38:1.4831E-4:36:7:4:3:17 0/1:37:7:7:0:9:77.78%:29:1.1312E-3:34:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:9:9:0:11:81.82%:39:1.1057E-4:35:2:2:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:6:6:0:8:75%:24:3.4965E-3:31:2:2:0:8 0/1:37:8:8:0:11:72.73%:32:5.16E-4:37:3:2:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:7:7:0:10:70%:28:1.548E-3:35:3:3:0:10 0/1:37:7:6:1:10:70%:28:1.548E-3:37:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:7:6:1:8:87.5%:31:6.993E-4:33:1:0:1:8 0/1:37:9:9:0:16:56.25%:33:4.0786E-4:35:7:5:2:16 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:37:3:3:0:9 0/1:37:8:6:2:14:57.14%:30:9.6618E-4:37:6:6:0:14 0/1:37:8:8:0:11:72.73%:32:5.16E-4:36:3:1:2:11 0/1:37:8:7:1:12:66.67%:31:6.7304E-4:37:4:2:2:12 0/1:36:8:8:0:13:61.54%:30:8.238E-4:37:5:4:1:13 0/1:36:7:6:1:9:77.78%:29:1.1312E-3:36:2:2:0:9 0/1:37:6:6:0:11:54.55%:22:6.192E-3:36:5:4:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:12:11:1:15:80%:52:5.2605E-6:45:3:2:1:15 0/1:37:7:7:0:11:63.64%:27:1.935E-3:35:4:4:0:11 0/1:37:6:5:1:8:75%:24:3.4965E-3:37:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:5:1:7:85.71%:26:2.331E-3:39:1:0:1:7 0/1:37:10:10:0:14:71.43%:41:7.6278E-5:37:4:2:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:8:8:0:12:66.67%:31:6.7304E-4:37:4:1:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:37:6:6:0:11:54.55%:22:6.192E-3:33:5:4:1:11 0/1:36:10:10:0:14:71.43%:41:7.6278E-5:37:4:2:2:14 0/1:37:10:10:0:14:71.43%:41:7.6278E-5:34:4:3:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:37:13:13:0:18:72.22%:54:3.7078E-6:41:5:3:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:10:10:0:14:71.43%:41:7.6278E-5:38:4:2:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:7:0:13:53.85%:25:2.6087E-3:36:6:4:2:14 1/1:37:13:12:1:14:92.86%:64:3.7391E-7:31:1:1:0:14 0/1:36:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:6:1:11:63.64%:27:1.935E-3:37:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:7:7:0:11:63.64%:27:1.935E-3:34:4:4:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:7:0:11:63.64%:27:1.935E-3:43:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:6:1:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:6:0:8:75%:24:3.4965E-3:35:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:36:3:3:0:11:27.27%:7:1.0714E-1:39:8:5:3:11 1/1:36:9:6:3:10:90%:42:5.9538E-5:38:1:0:1:10 0/1:36:14:14:0:20:70%:57:1.6702E-6:33:6:4:2:21 0/1:37:6:6:0:8:75%:24:3.4965E-3:35:2:2:0:8 0/1:37:9:9:0:12:75%:37:1.6826E-4:35:3:3:0:12 0/1:38:8:7:1:14:57.14%:30:9.6618E-4:33:6:6:0:14 0/1:37:6:5:1:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:12:12:0:16:75%:50:8.0605E-6:35:4:3:1:17 0/1:37:11:11:0:16:68.75%:44:3.3854E-5:41:5:4:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:36:3:3:0:9:33.33%:4:1.0294E-1:35:6:3:3:9 0/1:37:9:8:1:13:69.23%:36:2.2883E-4:40:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:6:6:0:8:75%:24:3.4965E-3:45:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:10:9:1:14:71.43%:41:7.6278E-5:36:4:3:1:14 0/1:36:9:9:0:14:64.29%:35:2.8986E-4:35:5:3:2:14 0/1:36:11:10:1:14:78.57%:47:1.6951E-5:43:3:2:1:14 0/1:37:7:7:0:18:38.89%:24:3.8123E-3:36:11:8:3:18 0/1:36:14:14:0:22:63.64%:55:2.7817E-6:34:8:8:0:22 0/1:37:15:15:0:18:83.33%:68:1.4655E-7:37:3:3:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:6:5:1:11:54.55%:22:6.192E-3:36:5:5:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:11:11:0:16:68.75%:44:3.3854E-5:33:5:5:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:36:11:11:0:14:78.57%:47:1.6951E-5:33:3:2:1:14 0/1:36:7:7:0:10:70%:28:1.548E-3:36:3:3:0:10 0/0:37:4:4:0:12:33.33%:4:4.6584E-2:38:8:7:1:12 0/1:37:9:9:0:11:81.82%:39:1.1057E-4:37:2:1:1:11 0/1:36:8:8:0:12:66.67%:31:6.7304E-4:37:4:4:0:13 0/1:36:6:6:0:8:75%:24:3.4965E-3:35:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:9:9:0:15:60%:34:3.4983E-4:37:6:3:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:4:4:0:10:40%:3:4.3344E-2:35:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:34:2:2:0:8:25%:5:2.3333E-1:37:6:4:2:8 0/1:36:8:8:0:10:80%:34:3.5723E-4:37:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:10:10:0:13:76.92%:42:5.3843E-5:43:3:2:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:6:0:11:54.55%:22:6.192E-3:37:5:3:2:11 0/1:38:6:6:0:10:60%:22:5.418E-3:36:4:4:0:10 0/1:37:11:11:0:13:84.62%:49:1.0096E-5:36:2:2:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:9:8:1:11:81.82%:39:1.1057E-4:31:2:2:0:11 0/1:37:9:9:0:15:60%:34:3.4983E-4:39:6:5:1:15 0/1:37:8:8:0:10:80%:34:3.5723E-4:37:2:1:1:10 0/1:36:9:8:1:13:69.23%:36:2.2883E-4:35:4:4:0:13 MTB_anc 1637006 . G A . PASS AC=73;AF=0.493;AN=148;ANN=A|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1224C>T|p.Val408Val|1224/2226|1224/2226|408/741||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637006G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637006G>A||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:12:12:0:18:66.67%:48:1.4831E-5:36:6:3:3:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:10:10:0:15:66.67%:40:9.995E-5:36:5:4:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:5:2:9:77.78%:29:1.1312E-3:36:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:7:1:15:53.33%:29:1.0995E-3:35:7:5:2:16 0/1:37:9:9:0:13:69.23%:36:2.2883E-4:34:4:2:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:8:7:1:12:66.67%:31:6.7304E-4:35:4:4:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:10:9:1:16:62.5%:39:1.2413E-4:35:6:3:3:16 0/1:37:7:7:0:9:77.78%:29:1.1312E-3:34:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:8:8:0:10:80%:34:3.5723E-4:35:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:6:0:8:75%:24:3.4965E-3:29:2:2:0:8 0/1:37:8:8:0:11:72.73%:32:5.16E-4:36:3:2:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:7:0:8:87.5%:31:6.993E-4:37:1:1:0:8 0/1:36:7:6:1:9:77.78%:29:1.1312E-3:34:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:6:0:7:85.71%:26:2.331E-3:32:1:0:1:7 0/1:36:9:9:0:16:56.25%:33:4.0786E-4:35:7:5:2:16 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:37:3:3:0:9 0/1:36:8:6:2:14:57.14%:30:9.6618E-4:36:6:6:0:14 0/1:37:7:7:0:9:77.78%:29:1.1312E-3:36:2:1:1:9 0/1:37:8:7:1:12:66.67%:31:6.7304E-4:34:4:2:2:12 0/1:37:7:7:0:12:58.33%:26:2.2883E-3:35:5:4:1:12 0/1:36:6:5:1:8:75%:24:3.4965E-3:31:2:2:0:9 0/1:37:6:6:0:11:54.55%:22:6.192E-3:33:5:4:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:12:11:1:15:80%:52:5.2605E-6:45:3:2:1:15 0/1:35:6:6:0:10:60%:22:5.418E-3:35:4:4:0:10 0/1:37:6:5:1:8:75%:24:3.4965E-3:37:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:5:1:7:85.71%:26:2.331E-3:36:1:0:1:7 0/1:37:9:9:0:13:69.23%:36:2.2883E-4:36:4:2:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:8:8:0:12:66.67%:31:6.7304E-4:35:4:1:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:37:6:6:0:10:60%:22:5.418E-3:35:4:3:1:10 0/1:37:10:10:0:13:76.92%:42:5.3843E-5:35:3:1:2:13 0/1:36:9:9:0:13:69.23%:36:2.2883E-4:37:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:13:13:0:16:81.25%:57:1.6121E-6:36:3:1:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:10:10:0:14:71.43%:41:7.6278E-5:36:4:2:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:6:6:0:7:85.71%:26:2.331E-3:32:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:37:12:11:1:13:92.31%:58:1.3461E-6:35:1:1:0:13 0/1:37:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:6:1:11:63.64%:27:1.935E-3:33:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:6:6:0:10:60%:22:5.418E-3:33:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:7:7:0:11:63.64%:27:1.935E-3:42:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:6:1:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:37:6:6:0:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:3:0:10:30%:4:1.0526E-1:33:7:4:3:11 1/1:36:9:6:3:10:90%:42:5.9538E-5:35:1:0:1:10 0/1:35:14:14:0:20:70%:57:1.6702E-6:35:6:4:2:20 0/1:37:6:6:0:8:75%:24:3.4965E-3:37:2:2:0:8 0/1:37:9:9:0:12:75%:37:1.6826E-4:35:3:3:0:12 0/1:37:8:7:1:14:57.14%:30:9.6618E-4:36:6:6:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:11:11:0:16:68.75%:44:3.3854E-5:36:5:3:2:16 0/1:36:9:9:0:14:64.29%:35:2.8986E-4:41:5:4:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:9:8:1:13:69.23%:36:2.2883E-4:41:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:8:0:12:66.67%:31:6.7304E-4:34:4:3:1:12 0/1:37:9:9:0:14:64.29%:35:2.8986E-4:36:5:3:2:14 0/1:37:9:9:0:12:75%:37:1.6826E-4:41:3:2:1:12 0/1:37:7:7:0:15:46.67%:25:3.1609E-3:36:8:5:3:17 0/1:36:12:12:0:18:66.67%:48:1.4831E-5:34:6:6:0:20 0/1:37:14:14:0:17:82.35%:63:4.8851E-7:36:3:3:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:9:9:0:13:69.23%:36:2.2883E-4:35:4:4:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:11:11:0:14:78.57%:47:1.6951E-5:33:3:2:1:14 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:33:3:3:0:10 0/0:37:4:4:0:12:33.33%:4:4.6584E-2:34:8:7:1:12 0/1:37:9:9:0:11:81.82%:39:1.1057E-4:34:2:1:1:11 0/1:37:7:7:0:10:70%:28:1.548E-3:37:3:3:0:11 0/1:35:6:6:0:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:8:0:14:57.14%:30:9.6618E-4:36:6:3:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:4:4:0:11:36.36%:4:4.5113E-2:33:7:4:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:8:8:0:10:80%:34:3.5723E-4:35:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:10:10:0:13:76.92%:42:5.3843E-5:43:3:2:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:6:0:10:60%:22:5.418E-3:35:4:2:2:10 0/1:37:6:6:0:10:60%:22:5.418E-3:36:4:4:0:10 0/1:37:11:11:0:13:84.62%:49:1.0096E-5:37:2:2:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:8:0:10:80%:34:3.5723E-4:37:2:2:0:10 0/1:37:8:8:0:14:57.14%:30:9.6618E-4:37:6:5:1:15 0/1:37:8:8:0:10:80%:34:3.5723E-4:34:2:1:1:10 0/1:37:8:8:0:11:72.73%:32:5.16E-4:32:3:3:0:11 MTB_anc 1637009 . G A . PASS AC=71;AF=0.500;AN=142;ANN=A|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1221C>T|p.Gly407Gly|1221/2226|1221/2226|407/741||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637009G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637009G>A||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:12:12:0:17:70.59%:49:1.1285E-5:37:5:3:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:10:10:0:15:66.67%:40:9.995E-5:32:5:4:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:5:2:9:77.78%:29:1.1312E-3:34:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:7:1:16:50%:29:1.2236E-3:35:8:6:2:16 0/1:37:9:9:0:14:64.29%:35:2.8986E-4:32:5:3:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:8:7:1:12:66.67%:31:6.7304E-4:36:4:4:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:10:9:1:16:62.5%:39:1.2413E-4:36:6:3:3:16 0/1:37:7:7:0:8:87.5%:31:6.993E-4:37:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:6:0:7:85.71%:26:2.331E-3:31:1:1:0:8 0/1:37:8:8:0:11:72.73%:32:5.16E-4:36:3:2:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:7:0:8:87.5%:31:6.993E-4:37:1:1:0:8 0/1:37:7:6:1:9:77.78%:29:1.1312E-3:34:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:9:9:0:15:60%:34:3.4983E-4:35:6:4:2:16 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:35:3:3:0:9 0/1:37:7:6:1:13:53.85%:25:2.6087E-3:37:6:6:0:14 0/1:37:7:7:0:8:87.5%:31:6.993E-4:37:1:1:0:9 0/1:37:8:7:1:11:72.73%:32:5.16E-4:33:3:1:2:12 0/1:37:7:7:0:12:58.33%:26:2.2883E-3:32:5:4:1:12 0/1:37:6:6:0:8:75%:24:3.4965E-3:33:2:2:0:8 0/1:37:6:6:0:10:60%:22:5.418E-3:34:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:12:11:1:15:80%:52:5.2605E-6:43:3:2:1:15 0/1:37:6:6:0:10:60%:22:5.418E-3:34:4:4:0:10 0/1:37:6:5:1:8:75%:24:3.4965E-3:34:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:5:1:7:85.71%:26:2.331E-3:37:1:0:1:7 0/1:37:9:9:0:13:69.23%:36:2.2883E-4:35:4:2:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:8:8:0:11:72.73%:32:5.16E-4:34:3:1:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:36:3:2:1:10 0/1:37:10:10:0:13:76.92%:42:5.3843E-5:34:3:1:2:13 0/1:37:9:9:0:13:69.23%:36:2.2883E-4:37:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:13:13:0:15:86.67%:60:8.7675E-7:37:2:1:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:10:10:0:14:71.43%:41:7.6278E-5:36:4:2:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:37:12:11:1:13:92.31%:58:1.3461E-6:35:1:1:0:13 0/1:37:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:6:1:11:63.64%:27:1.935E-3:35:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:6:6:0:10:60%:22:5.418E-3:37:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:7:0:11:63.64%:27:1.935E-3:41:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:6:1:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:6:0:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:3:0:10:30%:4:1.0526E-1:35:7:4:3:10 1/1:36:9:6:3:10:90%:42:5.9538E-5:33:1:0:1:10 0/1:37:14:14:0:19:73.68%:59:1.2025E-6:37:5:3:2:20 0/1:37:6:6:0:8:75%:24:3.4965E-3:37:2:2:0:8 0/1:37:8:8:0:12:72.73%:32:5.16E-4:34:3:3:0:12 0/1:37:8:7:1:14:57.14%:30:9.6618E-4:34:6:6:0:15 0/1:35:6:5:1:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:11:11:0:15:73.33%:46:2.4988E-5:36:4:2:2:16 0/1:37:10:10:0:15:66.67%:40:9.995E-5:41:5:4:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:9:8:1:13:69.23%:36:2.2883E-4:41:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:8:0:12:66.67%:31:6.7304E-4:34:4:3:1:12 0/1:37:9:9:0:14:64.29%:35:2.8986E-4:36:5:3:2:14 0/1:37:9:9:0:12:75%:37:1.6826E-4:41:3:2:1:12 0/1:37:7:7:0:15:46.67%:25:3.1609E-3:35:8:5:3:16 0/1:37:13:13:0:19:68.42%:53:5.0106E-6:31:6:6:0:20 0/1:37:14:14:0:17:82.35%:63:4.8851E-7:34:3:3:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:9:9:0:13:69.23%:36:2.2883E-4:36:4:4:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:11:11:0:14:78.57%:47:1.6951E-5:35:3:2:1:14 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:32:3:3:0:10 0/0:37:4:4:0:11:36.36%:4:4.5113E-2:36:7:6:1:12 0/1:37:9:9:0:11:81.82%:39:1.1057E-4:38:2:1:1:11 0/1:37:8:8:0:11:72.73%:32:5.16E-4:37:3:3:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:8:0:13:61.54%:30:8.238E-4:35:5:2:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:7:7:0:9:77.78%:29:1.1312E-3:35:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:10:10:0:12:83.33%:44:3.3652E-5:43:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:6:0:10:60%:22:5.418E-3:35:4:2:2:10 0/1:37:6:6:0:10:60%:22:5.418E-3:35:4:4:0:10 0/1:37:10:10:0:12:83.33%:44:3.3652E-5:37:2:2:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:8:0:10:80%:34:3.5723E-4:32:2:2:0:10 0/1:37:9:9:0:14:64.29%:35:2.8986E-4:33:5:4:1:15 0/1:36:8:8:0:10:80%:34:3.5723E-4:35:2:1:1:10 0/1:37:8:8:0:11:72.73%:32:5.16E-4:34:3:3:0:11 MTB_anc 1637012 . A G . PASS AC=64;AF=0.500;AN=128;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1218T>C|p.Gly406Gly|1218/2226|1218/2226|406/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637012A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637012A>G||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:12:12:0:17:70.59%:49:1.1285E-5:36:5:3:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:34:10:10:0:15:66.67%:40:9.995E-5:35:5:4:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:7:5:2:9:77.78%:29:1.1312E-3:34:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:6:5:1:14:42.86%:20:7.971E-3:35:8:6:2:16 0/1:32:8:8:0:11:72.73%:32:5.16E-4:33:3:2:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:8:7:1:12:66.67%:31:6.7304E-4:37:4:4:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:9:8:1:14:64.29%:35:2.8986E-4:36:5:3:2:16 0/1:33:6:6:0:8:75%:24:3.4965E-3:34:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:7:7:0:8:87.5%:31:6.993E-4:30:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:32:6:6:0:8:75%:24:3.4965E-3:36:2:2:0:8 0/1:35:8:8:0:11:72.73%:32:5.16E-4:35:3:2:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:7:6:1:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:9:9:0:16:56.25%:33:4.0786E-4:35:7:5:2:16 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:37:3:3:0:9 0/1:34:8:6:2:14:57.14%:30:9.6618E-4:37:6:6:0:14 0/1:36:7:7:0:9:77.78%:29:1.1312E-3:37:2:1:1:9 0/1:34:8:7:1:11:72.73%:32:5.16E-4:36:3:2:1:11 0/1:35:7:7:0:11:63.64%:27:1.935E-3:36:4:3:1:12 0/1:32:6:6:0:8:75%:24:3.4965E-3:36:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:12:11:1:15:80%:52:5.2605E-6:44:3:2:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:6:5:1:8:75%:24:3.4965E-3:37:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:35:6:5:1:7:85.71%:26:2.331E-3:37:1:0:1:7 0/1:34:8:8:0:12:66.67%:31:6.7304E-4:32:4:2:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:35:8:8:0:9:88.89%:36:2.0568E-4:35:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:34:9:9:0:12:75%:37:1.6826E-4:37:3:1:2:13 0/1:34:8:8:0:12:66.67%:31:6.7304E-4:35:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:34:12:12:0:14:85.71%:55:2.9913E-6:37:2:1:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:9:9:0:13:69.23%:36:2.2883E-4:34:4:2:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:6:6:0:7:85.71%:26:2.331E-3:34:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:34:11:10:1:12:91.67%:53:4.8074E-6:32:1:1:0:13 0/1:34:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:7:6:1:10:70%:28:1.548E-3:33:3:1:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:6:6:0:10:60%:22:5.418E-3:37:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:7:7:0:11:63.64%:27:1.935E-3:42:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:7:6:1:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:3:3:0:10:30%:4:1.0526E-1:33:7:4:3:10 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:33:13:13:0:18:72.22%:54:3.7078E-6:36:5:4:1:20 0/1:36:6:6:0:7:85.71%:26:2.331E-3:37:1:1:0:8 0/1:36:7:7:0:10:77.78%:29:1.1312E-3:37:2:2:0:11 0/1:37:8:7:1:14:57.14%:30:9.6618E-4:35:6:5:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:11:11:0:16:68.75%:44:3.3854E-5:35:5:3:2:16 0/1:35:10:10:0:15:66.67%:40:9.995E-5:36:5:4:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:8:7:1:12:66.67%:31:6.7304E-4:42:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:8:8:0:12:66.67%:31:6.7304E-4:37:4:3:1:12 0/1:34:8:8:0:13:61.54%:30:8.238E-4:37:5:3:2:14 0/1:35:9:9:0:12:75%:37:1.6826E-4:39:3:2:1:12 0/1:35:7:7:0:13:53.85%:25:2.6087E-3:36:6:3:3:15 0/1:35:13:13:0:17:76.47%:55:2.5647E-6:36:4:4:0:19 0/1:34:14:14:0:17:82.35%:63:4.8851E-7:35:3:3:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:6:6:0:10:60%:22:5.418E-3:36:4:4:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:32:11:11:0:13:84.62%:49:1.0096E-5:36:2:1:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:34:3:3:0:11:27.27%:7:1.0714E-1:36:8:7:1:12 0/1:33:9:9:0:11:81.82%:39:1.1057E-4:37:2:1:1:11 0/1:35:6:6:0:9:66.67%:23:4.5249E-3:36:3:3:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:8:8:0:13:61.54%:30:8.238E-4:34:5:2:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:9:9:0:12:75%:37:1.6826E-4:44:3:2:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:6:6:0:10:60%:22:5.418E-3:35:4:2:2:10 0/1:34:6:6:0:10:60%:22:5.418E-3:37:4:4:0:10 0/1:35:11:11:0:13:84.62%:49:1.0096E-5:37:2:2:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:8:8:0:10:80%:34:3.5723E-4:36:2:2:0:10 0/1:36:9:9:0:15:60%:34:3.4983E-4:36:6:5:1:15 0/1:35:8:8:0:10:80%:34:3.5723E-4:35:2:1:1:10 0/1:35:7:7:0:9:77.78%:29:1.1312E-3:36:2:2:0:11 MTB_anc 1637015 . A G . PASS AC=69;AF=0.507;AN=136;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1215T>C|p.Ala405Ala|1215/2226|1215/2226|405/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637015A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637015A>G||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:35:11:11:0:15:73.33%:46:2.4988E-5:35:4:2:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:10:10:0:15:66.67%:40:9.995E-5:35:5:4:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:7:5:2:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:8:7:1:15:53.33%:29:1.0995E-3:35:7:5:2:16 0/1:36:9:9:0:13:69.23%:36:2.2883E-4:34:4:3:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:7:6:1:10:70%:28:1.548E-3:36:3:3:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:10:9:1:16:62.5%:39:1.2413E-4:34:6:3:3:16 0/1:35:7:7:0:9:77.78%:29:1.1312E-3:34:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:8:8:0:10:80%:34:3.5723E-4:37:2:2:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:7:6:1:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:9:9:0:16:56.25%:33:4.0786E-4:35:7:5:2:16 0/1:36:6:6:0:9:66.67%:23:4.5249E-3:34:3:3:0:9 0/1:35:7:5:2:13:53.85%:25:2.6087E-3:35:6:6:0:14 0/1:36:7:7:0:9:77.78%:29:1.1312E-3:33:2:1:1:9 0/1:36:8:7:1:11:72.73%:32:5.16E-4:31:3:2:1:11 0/1:37:7:7:0:11:63.64%:27:1.935E-3:35:4:4:0:11 0/1:36:6:6:0:7:85.71%:26:2.331E-3:37:1:1:0:8 0/1:35:6:6:0:9:66.67%:23:4.5249E-3:31:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:11:10:1:14:78.57%:47:1.6951E-5:41:3:2:1:15 0/1:36:6:6:0:10:60%:22:5.418E-3:36:4:4:0:10 0/1:36:6:5:1:8:75%:24:3.4965E-3:35:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:5:1:7:85.71%:26:2.331E-3:33:1:0:1:7 0/1:36:9:9:0:13:69.23%:36:2.2883E-4:34:4:2:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:7:7:0:9:77.78%:29:1.1312E-3:35:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:34:3:2:1:9 0/1:36:10:10:0:13:76.92%:42:5.3843E-5:34:3:1:2:13 0/1:37:9:9:0:13:69.23%:36:2.2883E-4:36:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:12:12:0:14:85.71%:55:2.9913E-6:35:2:1:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:10:10:0:14:71.43%:41:7.6278E-5:34:4:2:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 0/1:36:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:6:1:10:70%:28:1.548E-3:35:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:36:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:36:3:2:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:7:6:1:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:6:6:0:7:85.71%:26:2.331E-3:34:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:35:14:14:0:20:70%:57:1.6702E-6:36:6:4:2:20 0/1:37:6:6:0:7:85.71%:26:2.331E-3:37:1:1:0:8 0/1:36:8:8:0:10:88.89%:36:2.0568E-4:37:1:1:0:11 0/1:37:8:7:1:13:61.54%:30:8.238E-4:35:5:5:0:14 0/1:35:6:5:1:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:11:11:0:15:73.33%:46:2.4988E-5:35:4:3:1:15 0/1:37:10:10:0:14:71.43%:41:7.6278E-5:35:4:3:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:8:7:1:12:66.67%:31:6.7304E-4:41:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:8:8:0:12:66.67%:31:6.7304E-4:36:4:3:1:12 0/1:36:9:9:0:14:64.29%:35:2.8986E-4:34:5:3:2:14 0/1:37:8:8:0:10:80%:34:3.5723E-4:47:2:1:1:12 0/1:37:7:7:0:15:46.67%:25:3.1609E-3:35:8:5:3:15 0/1:35:13:13:0:18:72.22%:54:3.7078E-6:36:5:5:0:19 0/1:36:14:14:0:17:82.35%:63:4.8851E-7:36:3:3:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:9:9:0:13:69.23%:36:2.2883E-4:37:4:4:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:11:11:0:13:84.62%:49:1.0096E-5:33:2:1:1:13 0/1:36:6:6:0:10:60%:22:5.418E-3:35:4:4:0:10 0/0:36:4:4:0:12:33.33%:4:4.6584E-2:34:8:7:1:12 0/1:36:9:9:0:11:81.82%:39:1.1057E-4:37:2:1:1:11 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:33:3:3:0:11 0/1:37:6:6:0:8:75%:24:3.4965E-3:34:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:9:9:0:12:75%:37:1.6826E-4:35:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:7:7:0:8:87.5%:31:6.993E-4:38:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:10:10:0:13:76.92%:42:5.3843E-5:36:3:2:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:6:6:0:9:66.67%:23:4.5249E-3:37:3:3:0:9 0/1:37:11:11:0:13:84.62%:49:1.0096E-5:36:2:2:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:8:8:0:10:80%:34:3.5723E-4:38:2:2:0:10 0/1:37:9:9:0:15:60%:34:3.4983E-4:36:6:5:1:15 0/1:37:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:9 0/1:36:8:8:0:11:72.73%:32:5.16E-4:37:3:3:0:11 MTB_anc 1637018 . G C . PASS AC=76;AF=0.521;AN=146;ANN=C|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1212C>G|p.Gly404Gly|1212/2226|1212/2226|404/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637018G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637018G>C||||||;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:35:12:12:0:17:70.59%:49:1.1285E-5:34:5:3:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:10:10:0:14:71.43%:41:7.6278E-5:35:4:4:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:5:2:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:8:7:1:13:61.54%:30:8.238E-4:33:5:4:1:13 0/1:36:9:9:0:14:64.29%:35:2.8986E-4:33:5:3:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:8:7:1:11:72.73%:32:5.16E-4:36:3:3:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:10:9:1:15:66.67%:40:9.995E-5:34:5:2:3:15 0/1:37:7:7:0:8:87.5%:31:6.993E-4:32:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:6:6:0:7:85.71%:26:2.331E-3:28:1:1:0:7 0/1:37:8:8:0:11:72.73%:32:5.16E-4:36:3:2:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:37:7:6:1:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:9:9:0:14:64.29%:35:2.8986E-4:33:5:4:1:14 0/1:37:6:6:0:8:75%:24:3.4965E-3:34:2:2:0:8 0/1:36:7:6:1:12:58.33%:26:2.2883E-3:36:5:5:0:13 0/1:37:7:7:0:8:87.5%:31:6.993E-4:37:1:1:0:9 0/1:36:8:7:1:11:72.73%:32:5.16E-4:32:3:2:1:11 0/1:37:7:7:0:10:70%:28:1.548E-3:33:3:3:0:11 0/1:36:6:6:0:7:85.71%:26:2.331E-3:37:1:1:0:7 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:31:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:11:10:1:14:78.57%:47:1.6951E-5:40:3:2:1:15 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:32:3:3:0:9 0/1:37:6:5:1:8:75%:24:3.4965E-3:33:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:5:1:7:85.71%:26:2.331E-3:33:1:0:1:7 0/1:37:9:9:0:12:75%:37:1.6826E-4:35:3:2:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:8:8:0:10:80%:34:3.5723E-4:31:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:36:7:7:0:10:70%:28:1.548E-3:32:3:2:1:10 0/1:37:10:10:0:12:83.33%:44:3.3652E-5:31:2:1:1:12 0/1:36:9:9:0:12:75%:37:1.6826E-4:35:3:2:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:13:13:0:15:86.67%:60:8.7675E-7:36:2:1:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:10:10:0:14:71.43%:41:7.6278E-5:32:4:1:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:6:6:0:7:85.71%:26:2.331E-3:32:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 0/1:37:8:8:0:9:88.89%:36:2.0568E-4:35:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:6:1:10:70%:28:1.548E-3:29:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:6:6:0:9:66.67%:23:4.5249E-3:35:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:7:0:11:63.64%:27:1.935E-3:34:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:6:1:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:6:6:0:7:85.71%:26:2.331E-3:34:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:36:14:14:0:19:73.68%:59:1.2025E-6:33:5:3:2:19 0/1:37:6:6:0:8:75%:24:3.4965E-3:34:2:2:0:8 0/1:36:8:8:0:11:80%:34:3.5723E-4:35:2:2:0:11 0/1:37:8:7:1:14:57.14%:30:9.6618E-4:31:6:5:1:14 0/1:36:6:5:1:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:11:11:0:14:78.57%:47:1.6951E-5:34:3:2:1:15 0/1:37:10:10:0:14:71.43%:41:7.6278E-5:35:4:3:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:9:8:1:12:75%:37:1.6826E-4:32:3:3:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:8:0:11:72.73%:32:5.16E-4:32:3:2:1:12 0/1:36:9:9:0:13:69.23%:36:2.2883E-4:35:4:2:2:13 1/1:35:9:9:0:10:90%:42:5.9538E-5:60:1:1:0:11 0/1:37:7:7:0:15:46.67%:25:3.1609E-3:34:8:5:3:15 0/1:36:13:13:0:17:76.47%:55:2.5647E-6:32:4:4:0:19 0/1:37:15:15:0:18:83.33%:68:1.4655E-7:29:3:3:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:9:9:0:13:69.23%:36:2.2883E-4:33:4:4:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:11:11:0:13:84.62%:49:1.0096E-5:36:2:1:1:13 0/1:36:6:6:0:9:66.67%:23:4.5249E-3:34:3:3:0:10 0/0:37:4:4:0:12:33.33%:4:4.6584E-2:33:8:7:1:12 0/1:37:9:9:0:11:81.82%:39:1.1057E-4:37:2:1:1:11 0/1:36:8:8:0:11:72.73%:32:5.16E-4:32:3:3:0:11 0/1:35:7:7:0:9:77.78%:29:1.1312E-3:32:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:9:9:0:12:75%:37:1.6826E-4:34:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:4:4:0:10:40%:3:4.3344E-2:31:6:4:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:7:7:0:8:87.5%:31:6.993E-4:38:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:10:10:0:13:76.92%:42:5.3843E-5:33:3:2:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:6:0:9:66.67%:23:4.5249E-3:36:3:2:1:9 0/1:36:6:6:0:9:66.67%:23:4.5249E-3:35:3:3:0:9 1/1:37:11:11:0:12:91.67%:53:4.8074E-6:32:1:1:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:8:8:0:10:80%:34:3.5723E-4:36:2:2:0:10 0/1:37:9:9:0:15:60%:34:3.4983E-4:34:6:5:1:15 0/1:36:8:8:0:9:88.89%:36:2.0568E-4:37:1:1:0:9 0/1:37:8:8:0:10:80%:34:3.5723E-4:34:2:2:0:11 MTB_anc 1637021 . C G . PASS AC=171;AF=0.983;AN=174;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1209G>C|p.Gly403Gly|1209/2226|1209/2226|403/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637021C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637021C>G||||||;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:6:6:0:7:85.71%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:32:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:33:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:12:11:1:13:92.31%:64:3.698E-7:0:0:0:0:13 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:30:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:12:11:1:13:92.31%:64:3.698E-7:0:0:0:0:14 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:12:10:2:13:92.31%:64:3.698E-7:0:0:0:0:14 1/1:33:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:9:7:2:10:90%:46:2.0568E-5:0:0:0:0:12 1/1:35:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:12:11:1:14:85.71%:58:1.3461E-6:32:1:0:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:32:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:11:10:1:12:91.67%:58:1.4176E-6:0:0:0:0:13 1/1:34:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:32:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:6:6:0:7:85.71%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:19:17:2:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:10:10:0:11:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:29:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:31:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:13:11:2:14:92.86%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:33:17:17:0:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:34:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:31:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:32:12:12:0:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:35:10:10:0:11:90.91%:52:5.4125E-6:0:0:0:0:11 1/1:33:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:32:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:31:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:31:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 MTB_anc 1637026 . C T . PASS AC=180;AF=0.989;AN=182;ANN=T|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1204G>A|p.Ala402Thr|1204/2226|1204/2226|402/741||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637026C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637026C>T||||||;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:33:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:33:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:6:6:0:7:85.71%:26:2.331E-3:36:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:12:1:14:92.86%:64:3.7391E-7:31:1:0:1:14 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:32:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:15:13:2:16:93.75%:75:2.8282E-8:31:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:11 0/1:35:10:10:0:12:83.33%:44:3.3652E-5:34:2:1:1:12 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:18:18:0:19:94.74%:92:5.6585E-10:28:1:0:1:20 1/1:36:19:19:0:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:32:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:12:12:0:13:92.31%:58:1.3461E-6:36:1:0:1:13 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:32:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:10:10:0:11:90.91%:47:1.7011E-5:31:1:0:1:13 1/1:36:13:13:0:14:92.86%:64:3.7391E-7:30:1:0:1:15 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 MTB_anc 1637228 . A G . PASS AC=11;AF=0.039;AN=282;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.1002T>C|p.Gly334Gly|1002/2226|1002/2226|334/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637228A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637228A>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:5:2:3:33:15.15%:27:2.6557E-2:39:28:15:13:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:3:1:2:35:8.57%:40:1.1957E-1:43:32:20:12:37 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:11 0/0:37:1:0:1:31:3.23%:48:5E-1:38:30:17:13:33 0/0:38:1:1:0:11:9.09%:14:5E-1:40:10:5:5:11 0/0:36:2:1:1:21:9.52%:25:2.439E-1:44:19:12:7:22 0/0:37:1:0:1:16:6.25%:21:5E-1:36:15:10:5:18 0/1:35:7:0:7:33:21.21%:22:5.4855E-3:39:26:12:14:35 0/1:34:6:2:4:13:46.15%:21:7.4534E-3:38:7:2:5:13 0/0:34:2:0:2:18:11.11%:18:2.4286E-1:44:16:7:9:18 0/0:36:3:1:2:15:20%:11:1.1207E-1:37:12:5:7:18 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:44:15:6:9:18 0/0:34:5:1:4:22:22.73%:12:2.4248E-2:45:17:8:9:24 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:39:20:11:9:22 0/0:38:1:1:0:13:7.69%:18:5E-1:36:12:7:5:14 0/0:37:1:0:1:11:9.09%:14:5E-1:40:10:6:4:12 0/0:37:1:0:1:10:10%:11:5E-1:39:9:5:4:11 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 0/0:37:1:0:1:13:7.69%:18:5E-1:39:12:5:7:13 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:17 0/0:34:6:4:2:24:25%:11:1.0968E-2:37:18:9:9:24 0/0:35:4:1:3:20:20%:13:5.3015E-2:38:16:9:7:21 0/0:33:4:1:3:29:13.79%:26:5.5981E-2:38:25:15:10:31 0/0:35:6:4:2:22:27.27%:9:1.057E-2:41:16:10:6:24 0/0:34:2:1:1:23:8.7%:28:2.4444E-1:41:21:13:8:25 0/0:36:3:2:1:14:21.43%:9:1.1111E-1:36:11:8:3:14 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:16 0/0:37:2:1:1:10:20%:7:2.3684E-1:48:8:5:3:12 0/0:37:3:0:3:22:13.64%:19:1.1628E-1:42:19:11:8:27 0/0:34:4:1:3:25:16%:21:5.4928E-2:42:21:13:8:28 0/0:35:2:0:2:25:8%:31:2.449E-1:39:23:13:10:28 0/0:37:3:0:3:20:15%:16:1.1538E-1:40:17:8:9:21 0/0:0:0:0:0:9:0%:18:1E0:46:9:0:9:11 0/0:37:3:1:2:20:15%:16:1.1538E-1:41:17:6:11:21 0/0:36:3:1:2:20:15%:16:1.1538E-1:38:17:8:9:21 0/0:28:1:0:1:12:8.33%:14:5E-1:36:10:5:5:12 0/0:37:5:4:1:43:11.63%:41:2.764E-2:41:38:22:16:46 0/0:35:6:2:4:30:20%:18:1.186E-2:39:24:13:11:30 0/0:35:3:1:2:32:9.38%:34:1.1905E-1:40:29:19:10:32 0/0:35:4:0:4:20:20%:13:5.3015E-2:40:16:8:8:22 0/0:37:1:0:1:21:4.76%:31:5E-1:40:20:12:8:23 0/0:32:5:0:5:22:22.73%:12:2.4248E-2:38:17:5:12:23 0/0:32:1:0:1:29:3.45%:45:5E-1:40:28:14:14:31 0/0:33:2:0:2:24:8.33%:27:2.4468E-1:38:22:13:9:26 0/0:36:5:3:2:28:17.86%:19:2.5729E-2:42:23:15:8:32 0/0:37:3:2:1:21:14.29%:19:1.1585E-1:42:18:9:9:24 0/0:0:0:0:0:15:0%:29:1E0:40:15:7:8:15 0/0:38:1:1:0:20:5%:27:5E-1:41:19:6:13:22 0/0:37:3:0:3:25:12%:25:1.1735E-1:40:22:10:12:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:4:2:2:20:20%:13:5.3015E-2:36:16:7:9:21 0/0:0:0:0:0:13:0%:25:1E0:43:13:6:7:15 0/0:0:0:0:0:15:0%:29:1E0:40:15:10:5:16 0/0:37:1:0:1:24:4.17%:34:5E-1:41:23:9:14:29 0/0:37:4:0:4:13:30.77%:6:4.7826E-2:36:9:4:5:14 0/0:0:0:0:0:13:0%:25:1E0:46:13:7:6:14 0/0:35:2:1:1:17:11.76%:18:2.4242E-1:35:15:9:6:17 0/0:37:1:0:1:16:6.25%:21:5E-1:46:15:9:6:17 0/0:38:1:1:0:16:6.25%:21:5E-1:44:15:6:9:16 0/0:36:3:1:2:24:12.5%:22:1.1702E-1:42:21:17:4:26 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:13 0/0:37:2:0:2:20:10%:21:2.4359E-1:36:18:6:12:22 0/0:32:1:0:1:13:7.69%:18:5E-1:41:12:6:6:14 0/0:37:1:0:1:25:4%:38:5E-1:44:24:11:13:27 0/0:37:1:0:1:36:2.78%:55:5E-1:43:35:21:14:40 0/0:32:4:0:4:19:21.05%:13:5.251E-2:38:15:12:3:19 0/0:36:4:2:2:36:11.11%:34:5.7257E-2:40:32:20:12:39 0/0:0:0:0:0:7:0%:14:1E0:34:7:2:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:3:0:3:20:15%:16:1.1538E-1:40:17:9:8:21 0/0:37:4:3:1:26:15.38%:20:5.5222E-2:42:22:12:10:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:5:3:2:31:16.13%:24:2.6257E-2:41:26:13:13:33 0/0:37:2:0:2:26:7.69%:30:2.451E-1:39:24:13:11:28 0/0:33:1:0:1:18:5.56%:24:5E-1:38:17:8:9:19 0/0:36:3:1:2:19:15.79%:17:1.1486E-1:40:16:9:7:20 0/0:37:2:1:1:20:10%:21:2.4359E-1:39:18:9:9:20 0/1:36:8:1:7:24:33.33%:27:1.949E-3:38:16:10:6:26 0/0:37:1:0:1:7:14.29%:8:5E-1:39:6:3:3:8 0/0:30:1:0:1:16:6.25%:21:5E-1:41:15:6:9:16 0/0:32:3:1:2:21:14.29%:19:1.1585E-1:44:18:8:10:28 0/0:38:1:1:0:18:5.56%:24:5E-1:34:17:10:7:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:37:1:0:1:9:11.11%:11:5E-1:44:8:6:2:11 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:37:5:3:2:28:17.86%:19:2.5729E-2:38:23:10:13:29 0/0:36:2:1:1:9:22.22%:7:2.3529E-1:38:7:6:1:10 0/0:37:3:0:3:24:12.5%:22:1.1702E-1:39:21:11:10:26 0/0:37:2:1:1:20:10%:21:2.4359E-1:40:18:11:7:21 0/0:37:2:2:0:20:10%:21:2.4359E-1:39:18:9:9:21 0/0:34:1:0:1:20:5%:27:5E-1:44:19:8:11:21 0/0:34:6:0:6:35:17.14%:25:1.238E-2:39:29:16:13:35 0/0:37:5:3:2:23:21.74%:14:2.4548E-2:35:18:9:9:23 0/1:35:7:4:3:37:18.92%:22:5.721E-3:42:30:15:15:38 0/0:35:2:1:1:12:16.67%:10:2.3913E-1:34:10:4:6:14 0/0:38:1:1:0:16:6.25%:21:5E-1:38:15:7:8:16 0/0:33:5:2:3:19:26.32%:10:2.3166E-2:44:14:11:3:19 0/0:32:4:0:4:27:14.81%:23:5.5494E-2:38:23:12:11:29 0/1:34:9:1:8:38:23.68%:29:1.1442E-3:38:29:16:13:42 0/0:38:1:1:0:21:4.76%:31:5E-1:39:20:11:9:24 0/0:35:6:3:3:25:24%:14:1.1145E-2:38:19:12:7:25 0/0:35:4:1:3:21:19.05%:15:5.3471E-2:44:17:7:10:23 0/0:37:1:0:1:18:5.56%:24:5E-1:39:17:9:8:18 0/0:0:0:0:0:11:0%:22:1E0:37:11:6:5:11 0/0:38:1:1:0:22:4.55%:31:5E-1:41:21:8:13:22 0/1:33:9:3:6:32:28.12%:29:1.0185E-3:36:23:14:9:36 0/0:31:6:2:4:34:17.65%:23:1.2287E-2:41:28:10:18:35 0/0:35:2:1:1:26:7.69%:30:2.451E-1:37:24:10:14:29 0/0:34:3:0:3:27:11.11%:28:1.1792E-1:41:24:13:11:28 0/0:34:5:1:4:34:14.71%:27:2.6693E-2:37:29:10:19:34 0/0:31:3:1:2:33:9.09%:37:1.1923E-1:37:30:18:12:36 0/0:0:0:0:0:10:0%:17:1E0:31:10:3:7:14 0/0:35:2:1:1:15:13.33%:16:2.4138E-1:41:13:6:7:17 0/0:34:4:1:3:19:21.05%:13:5.251E-2:43:15:8:7:23 0/1:37:11:6:5:32:34.38%:37:1.7351E-4:39:21:15:6:34 0/1:35:10:1:9:32:31.25%:33:4.259E-4:33:22:13:9:37 0/0:36:5:1:4:30:16.67%:21:2.6093E-2:36:25:10:15:31 0/1:35:6:0:6:11:54.55%:22:6.192E-3:40:5:2:3:13 0/0:37:3:0:3:10:30%:4:1.0526E-1:52:7:3:4:10 0/0:37:5:2:3:15:33.33%:6:2.1073E-2:37:10:4:6:17 0/0:0:0:0:0:25:0%:36:1E0:36:20:10:10:28 0/0:32:2:0:2:8:25%:5:2.3333E-1:41:6:3:3:9 0/0:36:3:2:1:17:17.65%:14:1.1364E-1:38:14:9:5:21 0/0:34:2:0:2:17:11.76%:18:2.4242E-1:35:15:7:8:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:1:0:1:10:10%:11:5E-1:35:9:4:5:11 0/0:35:3:0:3:19:15.79%:17:1.1486E-1:33:16:8:8:20 0/0:0:0:0:0:9:0%:18:1E0:39:9:1:8:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:1:0:1:8:12.5%:8:5E-1:41:7:4:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:38:8:5:3:8 0/1:35:7:2:5:19:36.84%:23:3.9926E-3:37:12:8:4:20 0/0:37:5:1:4:16:31.25%:6:2.1691E-2:41:11:7:4:16 0/0:34:3:1:2:20:15%:16:1.1538E-1:38:17:9:8:21 0/0:36:1:1:0:13:7.69%:18:5E-1:47:12:7:5:13 0/1:37:7:2:5:21:33.33%:23:4.3101E-3:36:14:5:9:21 0/0:37:5:2:3:24:20.83%:14:2.4823E-2:37:19:13:6:26 0/0:34:1:0:1:9:11.11%:11:5E-1:38:8:4:4:12 0/0:37:1:0:1:16:6.25%:21:5E-1:41:15:8:7:17 0/0:37:2:0:2:28:7.14%:34:2.4545E-1:39:26:14:12:31 0/0:32:4:0:4:23:17.39%:18:5.4264E-2:35:19:14:5:24 0/0:35:4:0:4:18:22.22%:10:5.1948E-2:36:14:10:4:18 0/0:37:4:2:2:25:16%:21:5.4928E-2:38:21:10:11:25 0/0:36:3:0:3:27:11.11%:28:1.1792E-1:40:24:12:12:27 0/0:35:6:1:5:28:21.43%:16:1.1603E-2:41:22:9:13:30 0/0:36:3:0:3:16:18.75%:11:1.129E-1:40:13:7:6:18 MTB_anc 1637234 . G A . PASS AC=12;AF=0.043;AN=280;ANN=A|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.996C>T|p.Gly332Gly|996/2226|996/2226|332/741||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637234G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637234G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:3:2:1:30:10%:31:1.1864E-1:41:27:14:13:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:33:4:2:2:35:11.43%:35:5.7106E-2:40:31:18:13:35 0/0:0:0:0:0:11:0%:22:1E0:38:11:4:7:12 0/0:35:1:0:1:31:3.23%:48:5E-1:38:30:15:15:33 0/0:38:1:1:0:10:10%:11:5E-1:46:9:4:5:10 0/0:35:2:1:1:21:9.52%:25:2.439E-1:41:19:11:8:23 0/0:29:1:0:1:14:7.14%:17:5E-1:37:13:9:4:16 0/1:33:7:1:6:34:20.59%:22:5.4855E-3:39:26:12:14:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:37:2:0:2:17:11.76%:18:2.4242E-1:46:15:6:9:18 0/0:35:5:3:2:20:25%:10:2.3562E-2:36:15:5:10:20 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:45:15:6:9:18 0/1:33:7:1:6:24:29.17%:23:4.7006E-3:44:17:7:10:26 0/0:37:2:1:1:21:9.52%:25:2.439E-1:40:19:10:9:21 0/0:38:1:1:0:12:8.33%:14:5E-1:36:11:6:5:14 0/0:35:1:0:1:9:11.11%:11:5E-1:40:8:4:4:11 0/0:29:1:0:1:8:12.5%:8:5E-1:40:7:2:5:11 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:7 0/0:37:1:0:1:13:7.69%:18:5E-1:39:12:5:7:13 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:16 0/0:33:6:4:2:25:24%:14:1.1145E-2:38:19:10:9:26 0/0:33:4:1:3:18:22.22%:10:5.1948E-2:38:14:8:6:19 0/0:35:4:1:3:29:13.79%:26:5.5981E-2:39:25:14:11:31 0/0:36:5:4:1:20:25%:10:2.3562E-2:42:15:9:6:25 0/0:34:3:2:1:22:13.64%:19:1.1628E-1:41:19:12:7:25 0/0:37:3:2:1:14:21.43%:9:1.1111E-1:40:11:8:3:14 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:16 0/0:37:1:1:0:8:12.5%:8:5E-1:49:7:4:3:13 0/0:32:4:0:4:28:14.29%:23:5.5746E-2:40:24:12:12:29 0/0:31:4:1:3:27:14.81%:23:5.5494E-2:43:23:13:10:29 0/0:30:3:0:3:27:11.11%:28:1.1792E-1:41:24:14:10:29 0/0:34:4:0:4:20:20%:13:5.3015E-2:40:16:7:9:21 0/0:0:0:0:0:11:0%:22:1E0:41:11:1:10:11 0/0:36:3:1:2:20:15%:16:1.1538E-1:42:17:6:11:21 0/0:30:3:1:2:21:14.29%:19:1.1585E-1:38:18:8:10:21 0/0:32:2:0:2:9:22.22%:7:2.3529E-1:38:7:2:5:12 0/0:36:5:4:1:39:12.82%:35:2.7273E-2:42:34:18:16:41 0/0:32:6:2:4:29:20.69%:18:1.1736E-2:38:23:12:11:30 0/0:32:3:1:2:32:9.38%:34:1.1905E-1:42:29:18:11:34 0/0:32:4:0:4:21:19.05%:15:5.3471E-2:41:17:7:10:22 0/0:26:1:0:1:21:4.76%:31:5E-1:40:20:12:8:24 0/0:32:4:0:4:22:18.18%:15:5.3885E-2:39:18:5:13:23 0/0:32:1:0:1:30:3.33%:44:5E-1:40:29:13:16:30 0/0:32:2:0:2:25:8%:31:2.449E-1:40:23:13:10:26 0/0:34:6:3:3:30:20%:18:1.186E-2:41:24:14:10:32 0/0:38:2:2:0:23:8.7%:28:2.4444E-1:42:21:9:12:24 0/0:31:1:1:0:16:6.25%:21:5E-1:40:15:7:8:16 0/0:38:1:1:0:18:5.56%:24:5E-1:43:17:5:12:21 0/0:32:3:0:3:23:13.04%:19:1.1628E-1:41:19:7:12:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:5:2:3:19:26.32%:10:2.3166E-2:38:14:6:8:22 0/0:0:0:0:0:14:0%:25:1E0:42:14:5:9:16 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:15 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:27 0/0:35:4:0:4:14:28.57%:6:4.8889E-2:40:10:5:5:14 0/0:0:0:0:0:11:0%:22:1E0:48:11:5:6:14 0/0:34:2:1:1:16:12.5%:15:2.4194E-1:36:14:8:6:17 0/0:34:2:0:2:18:11.11%:18:2.4286E-1:43:16:9:7:18 0/0:38:1:1:0:15:6.67%:21:5E-1:43:14:5:9:17 0/0:35:4:1:3:26:15.38%:20:5.5222E-2:40:22:17:5:26 0/0:0:0:0:0:12:0%:21:1E0:37:12:3:9:13 0/0:37:2:0:2:21:9.52%:25:2.439E-1:37:19:6:13:23 0/0:28:1:0:1:11:9.09%:14:5E-1:44:10:4:6:13 0/0:37:1:0:1:23:4.35%:34:5E-1:42:22:10:12:24 0/0:36:3:1:2:40:7.5%:46:1.2025E-1:41:37:20:17:42 0/0:34:3:0:3:16:18.75%:11:1.129E-1:38:13:10:3:19 0/0:36:4:2:2:35:11.43%:35:5.7106E-2:40:31:19:12:35 0/0:0:0:0:0:7:0%:14:1E0:40:7:2:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:33:3:0:3:20:15%:16:1.1538E-1:41:17:9:8:20 0/0:37:4:3:1:26:15.38%:20:5.5222E-2:40:22:12:10:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:5:3:2:31:16.13%:24:2.6257E-2:42:26:12:14:33 0/0:30:3:0:3:27:11.11%:28:1.1792E-1:38:24:12:12:28 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:19 0/0:38:1:1:0:14:7.14%:17:5E-1:41:13:6:7:19 0/0:37:2:1:1:19:10.53%:21:2.4324E-1:43:17:8:9:20 0/1:34:8:1:7:27:29.63%:26:2.1337E-3:39:19:10:9:28 0/0:34:1:0:1:8:12.5%:8:5E-1:37:7:4:3:8 0/0:31:1:0:1:16:6.25%:21:5E-1:41:15:6:9:16 0/0:35:3:1:2:23:13.04%:22:1.1667E-1:42:20:7:13:27 0/0:35:2:2:0:16:12.5%:15:2.4194E-1:36:14:6:8:19 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:36:2:0:2:10:20%:7:2.3684E-1:43:8:5:3:12 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:20 0/0:36:5:3:2:27:18.52%:19:2.5527E-2:40:22:10:12:29 0/0:37:2:1:1:9:22.22%:7:2.3529E-1:42:7:6:1:10 0/0:29:3:0:3:23:13.04%:22:1.1667E-1:39:20:9:11:24 0/0:37:2:1:1:19:10.53%:21:2.4324E-1:44:17:10:7:21 0/0:37:2:2:0:19:10.53%:21:2.4324E-1:39:17:8:9:21 0/0:37:1:0:1:20:5%:27:5E-1:46:19:8:11:21 0/0:35:6:0:6:33:18.18%:23:1.219E-2:38:27:14:13:35 0/0:36:5:3:2:22:22.73%:12:2.4248E-2:37:17:8:9:24 0/0:35:6:4:2:36:16.67%:25:1.2467E-2:41:30:14:16:39 0/0:32:2:1:1:13:15.38%:13:2.4E-1:35:11:3:8:13 0/0:38:1:1:0:13:7.69%:18:5E-1:39:12:4:8:16 0/0:32:4:2:2:18:22.22%:10:5.1948E-2:44:14:11:3:19 0/0:28:4:0:4:29:13.79%:26:5.5981E-2:41:25:13:12:30 0/1:34:9:1:8:40:22.5%:29:1.1791E-3:39:31:16:15:41 0/0:38:1:1:0:22:4.55%:31:5E-1:40:21:10:11:23 0/1:34:7:3:4:26:26.92%:23:4.9169E-3:37:19:12:7:27 0/0:30:4:1:3:23:17.39%:18:5.4264E-2:42:19:7:12:24 0/0:37:1:0:1:16:6.25%:21:5E-1:36:15:8:7:16 0/0:0:0:0:0:9:0%:18:1E0:35:9:5:4:12 0/0:38:1:1:0:21:4.76%:31:5E-1:42:20:7:13:23 0/1:36:7:3:4:33:21.21%:22:5.4855E-3:35:26:13:13:37 0/0:33:6:2:4:34:17.65%:23:1.2287E-2:40:28:11:17:36 0/0:34:2:1:1:28:7.14%:34:2.4545E-1:36:26:9:17:28 0/0:33:2:0:2:25:8%:31:2.449E-1:41:23:12:11:28 0/0:35:5:1:4:32:15.62%:24:2.6412E-2:38:27:9:18:35 0/0:38:1:1:0:29:3.45%:45:5E-1:38:28:15:13:34 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:14 0/0:34:3:1:2:15:20%:11:1.1207E-1:43:12:5:7:17 0/0:31:4:1:3:17:23.53%:11:5.132E-2:39:13:6:7:22 0/1:34:11:6:5:28:39.29%:38:1.4422E-4:39:17:10:7:34 0/1:34:9:1:8:31:29.03%:30:9.9376E-4:32:22:12:10:36 0/0:34:5:1:4:27:18.52%:19:2.5527E-2:38:22:7:15:30 0/0:30:5:0:5:13:38.46%:4:1.9565E-2:36:8:3:5:14 0/0:37:3:0:3:10:30%:4:1.0526E-1:53:7:3:4:10 0/1:36:6:3:3:18:33.33%:20:9.5308E-3:40:12:4:8:19 0/0:31:3:1:2:26:11.54%:25:1.1735E-1:36:22:9:13:28 0/0:25:2:0:2:10:20%:7:2.3684E-1:37:8:4:4:12 0/0:36:3:2:1:18:16.67%:14:1.1429E-1:37:15:6:9:20 0/0:35:2:0:2:16:12.5%:15:2.4194E-1:36:14:6:8:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:1:0:1:11:9.09%:14:5E-1:35:10:4:6:11 0/0:34:4:0:4:16:25%:8:5.0612E-2:34:12:5:7:20 0/0:0:0:0:0:9:0%:18:1E0:39:9:1:8:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:1:0:1:7:14.29%:8:5E-1:38:6:4:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:38:7:4:3:8 0/1:34:7:2:5:18:38.89%:24:3.8123E-3:40:11:6:5:20 0/1:34:7:1:6:16:43.75%:24:3.3988E-3:42:9:5:4:17 0/0:33:3:1:2:18:16.67%:14:1.1429E-1:40:15:7:8:19 0/0:31:2:1:1:14:14.29%:13:2.4E-1:46:11:6:5:14 0/1:35:7:2:5:21:33.33%:23:4.3101E-3:34:14:5:9:22 0/0:34:6:2:4:25:24%:14:1.1145E-2:36:19:11:8:27 0/0:35:1:0:1:12:8.33%:14:5E-1:35:11:5:6:12 0/0:27:2:0:2:16:12.5%:15:2.4194E-1:42:14:7:7:16 0/0:31:2:0:2:28:7.14%:34:2.4545E-1:39:26:13:13:30 0/0:32:3:0:3:21:14.29%:19:1.1585E-1:33:18:12:6:24 0/0:34:3:0:3:16:18.75%:11:1.129E-1:37:13:9:4:17 0/0:36:4:2:2:25:16%:21:5.4928E-2:39:21:10:11:25 0/0:29:5:0:5:27:18.52%:19:2.5527E-2:40:22:11:11:30 0/0:34:6:1:5:29:20.69%:18:1.1736E-2:42:23:9:14:31 0/0:35:3:0:3:15:20%:11:1.1207E-1:41:12:5:7:17 MTB_anc 1637249 . G A . PASS AC=12;AF=0.042;AN=284;ANN=A|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.981C>T|p.Gly327Gly|981/2226|981/2226|327/741||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637249G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637249G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:33:5:2:3:31:16.13%:24:2.6257E-2:40:26:13:13:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:33:4:2:2:34:11.76%:31:5.6946E-2:39:30:18:12:36 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:11 0/0:37:1:0:1:28:3.57%:41:5E-1:39:27:13:14:31 0/0:39:1:1:0:10:10%:11:5E-1:46:9:4:5:10 0/0:33:4:1:3:23:17.39%:18:5.4264E-2:40:19:11:8:24 0/0:31:1:0:1:14:7.14%:17:5E-1:39:13:9:4:15 0/1:32:7:1:6:32:21.88%:22:5.4182E-3:40:25:11:14:35 0/0:35:4:2:2:10:40%:3:4.3344E-2:39:6:2:4:12 0/0:24:3:0:3:16:18.75%:11:1.129E-1:49:13:6:7:16 0/0:36:5:3:2:18:27.78%:8:2.2727E-2:35:13:5:8:18 0/0:34:2:1:1:17:11.76%:18:2.4242E-1:43:15:6:9:18 0/0:32:6:1:5:22:27.27%:9:1.057E-2:44:16:5:11:25 0/0:38:2:1:1:21:9.52%:25:2.439E-1:40:19:9:10:21 0/0:39:1:1:0:13:7.69%:18:5E-1:37:12:6:6:13 0/0:28:1:0:1:9:11.11%:11:5E-1:41:8:4:4:10 0/0:33:1:0:1:10:10%:11:5E-1:38:9:4:5:10 0/0:0:0:0:0:7:0%:14:1E0:40:7:2:5:7 0/0:37:1:0:1:11:9.09%:14:5E-1:40:10:4:6:11 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:37:5:4:1:23:21.74%:14:2.4548E-2:39:18:8:10:26 0/0:33:4:1:3:17:23.53%:11:5.132E-2:40:13:7:6:17 0/0:34:3:1:2:26:11.54%:25:1.1765E-1:44:23:14:9:29 0/1:37:7:5:2:23:30.43%:23:4.5803E-3:43:16:9:7:26 0/0:35:3:2:1:23:13.04%:22:1.1667E-1:41:20:13:7:25 0/0:38:3:2:1:15:20%:11:1.1207E-1:40:12:8:4:15 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:16 0/0:31:2:1:1:10:20%:7:2.3684E-1:49:8:5:3:13 0/0:32:4:0:4:29:13.79%:26:5.5981E-2:41:25:14:11:30 0/0:32:4:1:3:24:16.67%:18:5.461E-2:43:20:11:9:26 0/0:28:2:0:2:23:8.7%:28:2.4444E-1:43:21:13:8:26 0/0:33:4:0:4:19:21.05%:13:5.251E-2:43:15:7:8:20 0/0:0:0:0:0:10:0%:17:1E0:43:10:0:10:10 0/0:34:3:1:2:19:15.79%:17:1.1486E-1:41:16:6:10:21 0/0:33:3:1:2:20:15%:16:1.1538E-1:39:17:8:9:22 0/0:37:1:0:1:10:10%:11:5E-1:39:9:4:5:12 0/0:36:6:4:2:36:16.67%:25:1.2467E-2:44:30:17:13:38 0/0:35:6:2:4:28:21.43%:16:1.1603E-2:38:22:12:10:28 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:43:27:17:10:32 0/0:30:3:0:3:21:14.29%:19:1.1585E-1:41:18:8:10:23 0/0:25:1:0:1:21:4.76%:31:5E-1:42:20:13:7:22 0/0:30:4:0:4:22:18.18%:15:5.3885E-2:39:18:5:13:23 0/0:33:1:0:1:28:3.57%:41:5E-1:43:27:13:14:28 0/0:33:2:0:2:23:8.7%:28:2.4444E-1:41:21:11:10:23 0/0:37:5:3:2:27:18.52%:19:2.5527E-2:41:22:12:10:30 0/0:39:2:2:0:22:9.09%:24:2.4419E-1:41:20:9:11:23 0/0:35:2:1:1:15:13.33%:16:2.4138E-1:42:13:6:7:15 0/0:36:2:1:1:21:9.52%:25:2.439E-1:44:19:7:12:22 0/0:33:2:0:2:22:9.09%:24:2.4419E-1:39:20:9:11:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:5:2:3:20:25%:10:2.3562E-2:40:15:7:8:21 0/0:29:1:0:1:15:6.67%:21:5E-1:40:14:5:9:15 0/0:0:0:0:0:14:0%:25:1E0:42:14:7:7:15 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:28 0/0:33:4:0:4:14:28.57%:6:4.8889E-2:41:10:5:5:14 0/0:29:1:0:1:9:11.11%:11:5E-1:49:8:5:3:11 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:39:15:8:7:17 0/0:32:2:0:2:18:11.11%:18:2.4286E-1:41:16:9:7:18 0/0:35:3:2:1:15:20%:11:1.1207E-1:40:12:5:7:15 0/0:35:3:1:2:26:11.54%:25:1.1765E-1:40:23:17:6:26 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:13 0/0:37:2:0:2:21:9.52%:25:2.439E-1:39:19:6:13:22 0/0:24:1:0:1:12:8.33%:14:5E-1:42:10:4:6:13 0/0:37:1:0:1:21:4.76%:31:5E-1:44:20:9:11:22 0/0:33:4:1:3:42:9.52%:43:5.801E-2:41:38:20:18:42 0/0:29:4:0:4:17:23.53%:11:5.132E-2:39:13:11:2:17 0/0:37:4:3:1:35:11.43%:35:5.7106E-2:41:31:19:12:36 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:30:3:0:3:19:15.79%:17:1.1486E-1:41:16:9:7:19 0/0:37:4:3:1:28:14.29%:23:5.5746E-2:41:24:12:12:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:5:3:2:30:16.67%:21:2.6093E-2:42:25:12:13:31 0/0:32:3:0:3:28:10.71%:28:1.1818E-1:38:25:13:12:28 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:16 0/0:36:2:1:1:18:11.11%:18:2.4286E-1:42:16:8:8:19 0/0:36:2:1:1:20:10%:21:2.4359E-1:41:18:9:9:20 0/1:33:7:1:6:24:29.17%:23:4.7006E-3:42:17:10:7:26 0/0:29:1:0:1:9:11.11%:11:5E-1:38:8:4:4:9 0/0:0:0:0:0:13:0%:25:1E0:41:13:6:7:14 0/0:31:4:1:3:18:22.22%:10:5.1948E-2:47:14:4:10:21 0/0:38:2:2:0:16:12.5%:15:2.4194E-1:39:14:6:8:18 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:33:3:0:3:12:25%:6:1.087E-1:43:9:6:3:13 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:20 0/0:37:4:3:1:21:19.05%:15:5.3471E-2:41:17:9:8:22 0/0:38:2:1:1:9:22.22%:7:2.3529E-1:43:7:6:1:10 0/0:32:3:0:3:23:13.04%:22:1.1667E-1:40:20:9:11:24 0/0:33:2:1:1:18:11.11%:18:2.4286E-1:45:16:11:5:19 0/0:39:2:2:0:19:10.53%:21:2.4324E-1:42:17:8:9:19 0/0:31:1:0:1:19:5.26%:28:5E-1:47:18:8:10:20 0/1:31:7:0:7:34:20.59%:22:5.5492E-3:38:27:14:13:37 0/0:36:5:3:2:17:29.41%:8:2.2239E-2:37:12:6:6:18 0/0:37:6:4:2:36:16.67%:25:1.2467E-2:40:30:13:17:38 0/0:31:3:1:2:14:21.43%:9:1.1111E-1:34:11:3:8:14 0/0:38:1:1:0:14:7.14%:17:5E-1:39:13:5:8:15 0/0:33:5:2:3:18:27.78%:8:2.2727E-2:46:13:11:2:20 0/0:27:3:0:3:28:10.71%:28:1.1818E-1:39:25:13:12:31 0/1:32:8:1:7:39:20.51%:25:2.5935E-3:41:30:15:15:40 0/0:39:1:1:0:19:5.26%:28:5E-1:41:18:9:9:20 0/1:34:7:3:4:23:30.43%:23:4.5803E-3:42:16:11:5:26 0/0:32:4:1:3:21:19.05%:15:5.3471E-2:45:17:7:10:23 0/0:37:1:0:1:16:6.25%:21:5E-1:38:15:8:7:16 0/0:29:1:0:1:11:9.09%:14:5E-1:35:10:4:6:11 0/0:39:1:1:0:23:4.35%:34:5E-1:42:22:8:14:23 0/1:35:7:3:4:31:22.58%:22:5.3469E-3:37:24:12:12:34 0/0:33:5:2:3:32:15.62%:24:2.6412E-2:39:27:11:16:35 0/0:39:1:1:0:26:3.85%:38:5E-1:38:25:9:16:29 0/0:29:3:0:3:29:10.34%:31:1.1842E-1:39:26:15:11:29 0/1:32:7:1:6:33:21.21%:22:5.4855E-3:37:26:10:16:34 0/0:29:3:1:2:38:7.89%:43:1.2E-1:39:35:17:18:38 0/0:0:0:0:0:13:0%:25:1E0:34:13:2:11:13 0/0:33:2:1:1:15:13.33%:16:2.4138E-1:42:13:5:8:18 0/0:32:5:1:4:20:25%:10:2.3562E-2:40:15:8:7:23 0/1:34:11:6:5:31:35.48%:37:1.6659E-4:39:20:11:9:36 0/0:0:0:0:0:34:0%:62:1E0:34:34:10:24:36 0/0:33:3:1:2:25:12%:25:1.1735E-1:37:22:6:16:27 0/0:33:5:0:5:12:41.67%:3:1.8634E-2:35:7:2:5:15 0/0:31:3:0:3:9:33.33%:4:1.0294E-1:52:6:2:4:9 0/1:35:7:3:4:18:38.89%:24:3.8123E-3:40:11:4:7:18 0/0:37:1:1:0:20:5%:27:5E-1:38:19:6:13:25 0/0:30:3:0:3:10:30%:4:1.0526E-1:33:7:4:3:11 0/0:36:4:3:1:16:25%:8:5.0612E-2:37:12:4:8:18 0/0:30:2:0:2:17:11.76%:18:2.4242E-1:35:15:6:9:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:31:1:0:1:11:9.09%:14:5E-1:39:10:4:6:11 0/0:33:3:0:3:16:18.75%:11:1.129E-1:39:13:6:7:17 0/0:0:0:0:0:8:0%:14:1E0:43:8:1:7:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:2:0:2:8:25%:5:2.3333E-1:40:6:2:4:8 0/0:31:1:0:1:7:14.29%:8:5E-1:40:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:9:0%:18:1E0:38:9:5:4:9 0/1:36:6:2:4:17:35.29%:20:9.2021E-3:39:11:6:5:20 0/1:32:6:1:5:14:42.86%:20:7.971E-3:44:8:4:4:16 0/0:34:2:1:1:17:11.76%:18:2.4242E-1:39:15:8:7:19 0/0:33:2:1:1:15:13.33%:16:2.4138E-1:46:13:7:6:16 0/0:34:6:2:4:21:28.57%:9:1.0344E-2:34:15:5:10:24 0/0:33:5:2:3:25:20%:17:2.5076E-2:39:20:13:7:27 0/0:33:1:0:1:10:10%:11:5E-1:41:9:4:5:12 0/0:31:1:0:1:16:6.25%:21:5E-1:41:15:7:8:18 0/0:33:1:0:1:20:5%:27:5E-1:42:19:11:8:24 0/0:32:2:0:2:19:10.53%:18:2.4286E-1:35:16:11:5:22 0/0:30:3:0:3:14:21.43%:9:1.1111E-1:36:11:8:3:15 0/0:34:5:2:3:24:20.83%:14:2.4823E-2:41:19:10:9:24 0/0:32:5:0:5:25:20%:17:2.5076E-2:42:20:10:10:28 0/0:33:4:1:3:28:14.29%:23:5.5746E-2:42:24:10:14:30 0/0:29:3:0:3:16:18.75%:11:1.129E-1:41:13:5:8:19 MTB_anc 1637255 . C G . PASS AC=19;AF=0.067;AN=284;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.975G>C|p.Gly325Gly|975/2226|975/2226|325/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637255C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637255C>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:6:2:4:32:18.75%:20:1.2087E-2:41:26:13:13:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:4:2:2:32:12.5%:29:5.6596E-2:38:28:16:12:33 0/0:0:0:0:0:10:0%:17:1E0:38:10:4:6:10 0/0:37:1:0:1:28:3.57%:41:5E-1:39:27:14:13:30 0/0:37:1:1:0:10:10%:11:5E-1:47:9:4:5:10 0/0:32:3:1:2:20:15%:16:1.1538E-1:40:17:10:7:21 0/0:29:2:0:2:15:13.33%:16:2.4138E-1:39:13:9:4:15 0/1:34:9:1:8:30:30%:30:9.678E-4:40:21:11:10:32 0/1:35:6:2:4:11:54.55%:22:6.192E-3:40:5:2:3:11 0/0:35:3:0:3:16:18.75%:11:1.129E-1:49:13:6:7:16 0/0:36:5:3:2:19:26.32%:10:2.3166E-2:36:14:5:9:19 0/0:38:1:1:0:16:6.25%:21:5E-1:45:15:6:9:18 0/0:35:6:1:5:22:27.27%:9:1.057E-2:44:16:6:10:24 0/0:37:2:1:1:20:10%:21:2.4359E-1:41:18:8:10:20 0/0:38:1:1:0:14:7.14%:17:5E-1:35:13:7:6:14 0/0:37:1:0:1:9:11.11%:11:5E-1:42:8:3:5:9 0/0:37:1:0:1:10:10%:11:5E-1:38:9:4:5:10 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:7 0/0:38:1:0:1:10:10%:11:5E-1:40:9:4:5:11 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/1:35:7:4:3:24:29.17%:23:4.7006E-3:37:17:8:9:24 0/0:37:3:1:2:17:17.65%:14:1.1364E-1:39:14:7:7:17 0/0:37:4:1:3:28:14.29%:23:5.5494E-2:43:23:14:9:29 0/1:35:8:5:3:24:33.33%:27:1.949E-3:42:16:10:6:25 0/0:35:3:2:1:22:13.64%:19:1.1628E-1:41:19:13:6:24 0/0:36:3:2:1:15:20%:11:1.1207E-1:40:12:8:4:15 0/0:32:1:0:1:16:6.25%:21:5E-1:38:15:6:9:16 0/0:37:2:1:1:10:20%:7:2.3684E-1:49:8:5:3:13 0/0:36:4:0:4:27:14.81%:23:5.5494E-2:40:23:13:10:27 0/0:34:4:1:3:23:17.39%:18:5.4264E-2:42:19:10:9:24 0/0:34:3:0:3:22:13.64%:19:1.1628E-1:43:19:12:7:25 0/0:37:4:0:4:20:20%:13:5.3015E-2:43:16:8:8:20 0/0:0:0:0:0:9:0%:18:1E0:44:9:0:9:9 0/0:37:3:1:2:21:14.29%:19:1.1585E-1:42:18:6:12:21 0/0:35:4:1:3:22:18.18%:15:5.3885E-2:40:18:8:10:22 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:38:10:4:6:12 0/0:36:5:4:1:31:16.13%:21:2.6093E-2:47:25:14:11:34 0/0:35:6:2:4:27:22.22%:16:1.1461E-2:37:21:12:9:27 0/0:36:3:1:2:31:9.68%:34:1.1885E-1:43:28:18:10:32 0/0:36:4:0:4:23:17.39%:18:5.4264E-2:41:19:8:11:23 0/0:37:1:0:1:21:4.76%:31:5E-1:40:20:13:7:22 0/0:37:4:0:4:21:19.05%:15:5.3471E-2:38:17:5:12:22 0/0:38:1:0:1:26:3.85%:38:5E-1:43:25:12:13:26 0/0:37:2:0:2:23:8.7%:28:2.4444E-1:40:21:11:10:23 0/0:34:6:3:3:29:20.69%:18:1.1736E-2:40:23:12:11:30 0/0:37:3:2:1:23:13.04%:22:1.1667E-1:42:20:9:11:23 0/0:36:2:1:1:14:14.29%:12:2.4074E-1:44:12:5:7:15 0/0:34:2:1:1:20:10%:21:2.4359E-1:44:18:7:11:21 0/0:35:3:0:3:23:13.04%:22:1.1667E-1:40:20:9:11:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:5:2:3:19:26.32%:10:2.3166E-2:40:14:7:7:20 0/0:26:1:0:1:15:6.67%:21:5E-1:41:14:5:9:15 0/0:28:1:0:1:15:6.67%:21:5E-1:43:14:7:7:15 0/0:32:1:0:1:25:4%:38:5E-1:44:24:9:15:27 0/0:36:4:0:4:14:28.57%:6:4.8889E-2:38:10:5:5:14 0/0:35:2:0:2:10:20%:7:2.3684E-1:53:8:5:3:11 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:39:15:8:7:17 0/0:37:2:0:2:18:11.11%:18:2.4286E-1:44:16:9:7:18 0/0:33:3:2:1:13:23.08%:9:1.1E-1:38:10:4:6:13 0/0:35:3:1:2:26:11.54%:25:1.1765E-1:40:23:17:6:26 0/0:32:1:0:1:12:8.33%:14:5E-1:38:11:3:8:13 0/0:37:2:0:2:21:9.52%:25:2.439E-1:39:19:6:13:22 0/0:37:1:0:1:12:8.33%:14:5E-1:44:11:4:7:13 0/0:37:1:0:1:20:5%:27:5E-1:44:19:9:10:21 0/0:35:4:1:3:40:10%:40:5.7784E-2:42:36:19:17:40 0/0:36:4:0:4:16:25%:8:4.9808E-2:40:11:9:2:17 0/0:37:5:3:2:35:14.29%:30:2.6822E-2:42:30:18:12:35 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:33:3:0:3:17:17.65%:11:1.129E-1:42:13:8:5:17 0/0:37:4:3:1:26:15.38%:20:5.5222E-2:43:22:11:11:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:5:3:2:29:17.24%:22:2.5917E-2:43:24:11:13:30 0/0:34:3:0:3:27:11.11%:28:1.1792E-1:38:24:13:11:27 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:16 0/0:37:2:1:1:18:11.11%:18:2.4286E-1:42:16:8:8:19 0/0:37:2:1:1:19:10.53%:21:2.4324E-1:42:17:8:9:20 0/1:33:8:1:7:25:32%:26:2.0146E-3:41:17:10:7:26 0/0:37:1:0:1:8:12.5%:8:5E-1:40:7:3:4:8 0/0:33:1:0:1:12:8.33%:14:5E-1:42:11:5:6:12 0/0:32:4:1:3:18:22.22%:10:5.1948E-2:44:14:5:9:20 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:39:15:7:8:18 0/0:37:1:1:0:23:4.35%:34:5E-1:39:22:13:9:23 0/0:36:2:0:2:11:18.18%:10:2.381E-1:42:9:6:3:13 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 0/0:35:5:3:2:20:25%:10:2.3562E-2:41:15:8:7:20 0/0:38:1:0:1:8:12.5%:8:5E-1:42:7:6:1:10 0/0:35:3:0:3:18:16.67%:14:1.1429E-1:43:15:8:7:20 0/0:37:2:1:1:18:11.11%:18:2.4286E-1:45:16:11:5:19 0/0:34:2:2:0:19:10.53%:21:2.4324E-1:42:17:8:9:19 0/0:37:1:0:1:19:5.26%:28:5E-1:46:18:8:10:20 0/1:35:7:0:7:35:20%:22:5.6095E-3:40:28:15:13:36 0/1:36:6:3:3:15:40%:20:8.4291E-3:40:9:5:4:15 0/1:36:7:4:3:36:19.44%:22:5.6667E-3:40:29:13:16:38 0/0:35:2:1:1:11:18.18%:10:2.381E-1:37:9:3:6:12 0/0:38:1:1:0:14:7.14%:17:5E-1:38:13:6:7:14 0/1:35:6:2:4:19:31.58%:20:9.828E-3:45:13:10:3:20 0/0:35:3:0:3:29:10.34%:31:1.1842E-1:41:26:14:12:31 0/1:36:9:1:8:40:22.5%:29:1.1791E-3:42:31:16:15:41 0/0:38:1:1:0:20:5%:27:5E-1:41:19:9:10:20 0/1:35:8:3:5:23:34.78%:27:1.8791E-3:42:15:11:4:25 0/0:34:5:1:4:22:22.73%:12:2.4248E-2:44:17:7:10:23 0/0:38:1:0:1:16:6.25%:21:5E-1:38:15:8:7:16 0/0:0:0:0:0:10:0%:17:1E0:34:10:4:6:11 0/0:38:1:1:0:21:4.76%:31:5E-1:41:20:7:13:21 0/1:36:9:3:6:34:26.47%:29:1.0644E-3:38:25:12:13:34 0/0:34:4:1:3:28:14.29%:23:5.5494E-2:40:23:9:14:30 0/0:33:3:1:2:29:10.34%:31:1.1842E-1:38:26:10:16:29 0/0:35:3:0:3:29:10.34%:31:1.1842E-1:39:26:15:11:29 0/0:36:6:1:5:30:20%:18:1.186E-2:38:24:9:15:31 0/0:34:3:1:2:38:7.89%:43:1.2E-1:39:35:17:18:38 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:13 0/0:36:3:1:2:15:20%:11:1.1207E-1:41:12:5:7:16 0/0:35:5:1:4:20:25%:10:2.3562E-2:38:15:8:7:22 0/1:35:12:6:6:34:35.29%:41:7.5302E-5:39:22:12:10:36 0/0:0:0:0:0:33:0%:63:1E0:35:33:13:20:36 0/0:35:5:1:4:23:21.74%:14:2.4548E-2:39:18:5:13:24 0/1:36:6:0:6:16:37.5%:20:8.837E-3:38:10:3:7:16 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:52:6:2:4:9 0/1:37:7:3:4:18:38.89%:24:3.8123E-3:41:11:4:7:18 0/0:34:4:1:3:25:16%:21:5.4928E-2:38:21:8:13:25 0/0:33:4:0:4:10:40%:3:4.3344E-2:35:6:4:2:10 0/0:32:4:3:1:15:26.67%:8:4.9808E-2:38:11:4:7:17 0/0:37:2:0:2:15:13.33%:16:2.4138E-1:35:13:5:8:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:1:0:1:11:9.09%:14:5E-1:39:10:4:6:11 0/0:33:3:0:3:14:21.43%:9:1.1111E-1:40:11:6:5:16 0/0:0:0:0:0:8:0%:14:1E0:42:8:1:7:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:2:0:2:8:25%:5:2.3333E-1:38:6:2:4:8 0/0:30:2:0:2:9:22.22%:7:2.3529E-1:38:7:4:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:8:0%:14:1E0:38:8:4:4:9 0/1:34:7:2:5:20:35%:23:4.158E-3:39:13:8:5:20 0/1:34:8:1:7:16:50%:29:1.2236E-3:45:8:4:4:16 0/0:34:3:1:2:17:17.65%:14:1.1364E-1:39:14:7:7:18 0/0:31:2:1:1:15:13.33%:16:2.4138E-1:46:13:7:6:16 0/1:36:8:2:6:21:38.1%:27:1.7241E-3:37:13:3:10:24 0/1:35:7:2:5:26:26.92%:23:4.9169E-3:42:19:12:7:27 0/0:37:1:0:1:11:9.09%:14:5E-1:42:10:4:6:12 0/0:26:1:0:1:16:6.25%:21:5E-1:42:15:7:8:17 0/0:34:2:0:2:21:9.52%:25:2.439E-1:42:19:11:8:24 0/0:33:4:0:4:21:19.05%:15:5.3471E-2:35:17:11:6:22 0/0:29:4:0:4:15:26.67%:8:4.9808E-2:36:11:8:3:15 0/0:35:5:2:3:24:20.83%:14:2.4823E-2:40:19:10:9:24 0/0:32:5:0:5:24:20.83%:14:2.4823E-2:41:19:10:9:27 0/0:35:5:1:4:29:17.24%:22:2.5917E-2:42:24:10:14:30 0/0:34:3:0:3:14:21.43%:9:1.1111E-1:42:11:4:7:17 MTB_anc 1637258 . T C . PASS AC=24;AF=0.085;AN=282;ANN=C|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.972A>G|p.Gly324Gly|972/2226|972/2226|324/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637258T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637258T>C||||||;HOM=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:6:2:4:32:18.75%:20:1.2087E-2:40:26:14:12:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:5:2:3:31:16.13%:24:2.6257E-2:39:26:15:11:32 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:10 0/0:37:1:0:1:27:3.7%:41:5E-1:39:26:14:12:29 0/0:38:1:1:0:9:11.11%:11:5E-1:43:8:3:5:10 0/0:35:4:1:3:19:21.05%:13:5.251E-2:40:15:10:5:20 0/0:37:2:0:2:15:13.33%:16:2.4138E-1:40:13:9:4:15 0/1:36:9:1:8:30:30%:30:9.678E-4:40:21:12:9:32 0/1:37:6:2:4:10:60%:22:5.418E-3:39:4:1:3:11 0/0:36:3:0:3:16:18.75%:11:1.129E-1:48:13:6:7:16 0/0:37:5:3:2:17:29.41%:8:2.2239E-2:36:12:5:7:19 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:42:15:6:9:18 0/1:37:7:1:6:21:33.33%:23:4.3101E-3:45:14:5:9:24 0/0:38:2:1:1:20:10%:21:2.4359E-1:39:18:8:10:20 0/0:38:1:1:0:13:7.69%:18:5E-1:34:12:6:6:14 0/0:37:1:0:1:9:11.11%:11:5E-1:42:8:3:5:9 0/0:37:1:0:1:9:11.11%:11:5E-1:39:8:3:5:10 0/0:0:0:0:0:7:0%:14:1E0:39:7:2:5:7 0/0:38:1:0:1:8:12.5%:8:5E-1:43:7:3:4:10 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:15 0/1:36:7:4:3:24:29.17%:23:4.7006E-3:36:17:8:9:24 0/0:36:3:1:2:16:18.75%:11:1.129E-1:39:13:7:6:18 0/0:37:4:1:3:28:14.29%:23:5.5746E-2:41:24:15:9:29 0/1:36:8:5:3:23:34.78%:27:1.8791E-3:42:15:9:6:25 0/0:35:3:2:1:21:14.29%:19:1.1585E-1:42:18:12:6:24 0/0:37:3:2:1:13:23.08%:9:1.1E-1:43:10:8:2:15 0/0:32:1:0:1:15:6.67%:21:5E-1:36:14:5:9:16 0/0:35:3:1:2:11:27.27%:7:1.0714E-1:49:8:5:3:13 0/0:35:4:0:4:25:16%:21:5.4928E-2:40:21:12:9:27 0/0:36:4:1:3:23:17.39%:18:5.4264E-2:40:19:10:9:24 0/0:34:3:0:3:23:13.04%:22:1.1667E-1:42:20:13:7:25 0/0:37:4:0:4:19:21.05%:13:5.251E-2:43:15:7:8:20 0/0:0:0:0:0:9:0%:18:1E0:41:9:0:9:9 0/0:37:3:1:2:16:18.75%:11:1.129E-1:45:13:5:8:19 0/0:34:4:1:3:20:20%:13:5.3015E-2:40:16:8:8:22 0/0:37:2:0:2:11:18.18%:10:2.381E-1:39:9:4:5:12 0/1:35:7:4:3:33:21.21%:22:5.4855E-3:45:26:15:11:34 0/0:37:6:2:4:26:23.08%:13:1.1309E-2:37:20:12:8:27 0/0:34:3:1:2:30:10%:31:1.1864E-1:43:27:17:10:32 0/0:36:4:0:4:22:18.18%:15:5.3885E-2:39:18:8:10:24 0/0:37:1:0:1:18:5.56%:24:5E-1:42:17:12:5:22 0/0:36:4:0:4:22:19.05%:15:5.3471E-2:38:17:5:12:22 0/0:38:1:0:1:25:4%:38:5E-1:43:24:12:12:26 0/0:35:2:0:2:22:9.09%:24:2.4419E-1:40:20:10:10:23 0/0:37:6:3:3:27:22.22%:16:1.1461E-2:40:21:12:9:30 0/0:35:3:2:1:22:13.64%:19:1.1628E-1:41:19:9:10:22 0/0:35:2:1:1:14:14.29%:12:2.4074E-1:44:12:5:7:15 0/0:36:2:1:1:19:10.53%:21:2.4324E-1:44:17:7:10:20 0/0:37:4:0:4:23:17.39%:18:5.4264E-2:39:19:9:10:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:5:2:3:18:27.78%:8:2.2727E-2:39:13:7:6:20 0/0:37:1:0:1:16:6.25%:21:5E-1:40:15:6:9:16 0/0:32:1:0:1:13:7.69%:18:5E-1:42:12:7:5:15 0/0:37:1:0:1:26:3.85%:38:5E-1:42:25:9:16:27 0/0:37:4:0:4:12:33.33%:4:4.6584E-2:36:8:4:4:13 0/0:25:1:0:1:9:11.11%:11:5E-1:48:8:5:3:11 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:37:15:8:7:17 0/0:37:2:0:2:18:11.11%:18:2.4286E-1:40:16:9:7:18 0/0:35:3:2:1:13:23.08%:9:1.1E-1:38:10:4:6:13 0/0:37:3:1:2:25:12%:25:1.1735E-1:41:22:16:6:25 0/0:30:1:0:1:12:8.33%:14:5E-1:34:11:3:8:13 0/0:37:2:0:2:20:10%:21:2.4359E-1:38:18:6:12:22 0/0:37:1:0:1:12:8.33%:14:5E-1:44:11:4:7:13 0/0:38:1:0:1:20:5%:27:5E-1:44:19:9:10:21 0/0:37:4:1:3:37:10.81%:38:5.7399E-2:41:33:18:15:40 0/0:35:4:0:4:15:26.67%:8:4.9808E-2:38:11:9:2:16 0/0:37:5:3:2:34:14.71%:27:2.6693E-2:42:29:18:11:34 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:3:0:3:17:17.65%:14:1.1364E-1:40:14:8:6:17 0/0:37:4:3:1:26:15.38%:20:5.5222E-2:41:22:11:11:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:5:3:2:26:19.23%:17:2.531E-2:41:21:10:11:28 0/0:35:3:0:3:27:11.11%:28:1.1792E-1:37:24:13:11:27 0/0:32:1:0:1:15:6.67%:21:5E-1:42:14:7:7:16 0/0:38:2:1:1:18:11.76%:18:2.4242E-1:43:15:8:7:19 0/0:38:2:1:1:19:10.53%:21:2.4324E-1:40:17:8:9:20 0/1:37:8:1:7:24:33.33%:27:1.949E-3:40:16:10:6:26 0/0:37:1:0:1:8:12.5%:8:5E-1:38:7:3:4:8 0/0:27:1:0:1:12:8.33%:14:5E-1:40:11:5:6:12 0/0:37:4:1:3:17:23.53%:11:5.132E-2:46:13:5:8:20 0/0:38:2:2:0:16:12.5%:15:2.4194E-1:38:14:7:7:17 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:23 0/0:36:3:0:3:12:25%:6:1.087E-1:42:9:6:3:13 0/0:0:0:0:0:18:0%:32:1E0:36:18:10:8:19 0/0:36:5:3:2:18:27.78%:8:2.2727E-2:39:13:8:5:20 0/0:37:2:1:1:9:22.22%:7:2.3529E-1:42:7:6:1:10 0/0:37:3:0:3:19:15.79%:17:1.1486E-1:41:16:8:8:20 0/0:37:2:1:1:18:11.11%:18:2.4286E-1:45:16:11:5:19 0/0:38:2:2:0:19:10.53%:21:2.4324E-1:41:17:8:9:19 0/0:37:1:0:1:19:5.26%:28:5E-1:45:18:8:10:20 0/1:37:8:0:8:36:22.22%:25:2.5282E-3:40:28:15:13:36 0/1:37:6:3:3:14:42.86%:20:7.971E-3:38:8:5:3:15 0/1:36:8:4:4:36:22.22%:25:2.5282E-3:40:28:13:15:37 0/0:36:3:1:2:12:25%:6:1.087E-1:35:9:3:6:12 0/0:38:1:1:0:13:7.69%:18:5E-1:38:12:5:7:14 0/1:34:6:2:4:19:31.58%:20:9.828E-3:43:13:11:2:20 0/0:35:5:0:5:27:18.52%:19:2.5527E-2:38:22:12:10:29 0/1:36:10:1:9:40:25%:32:5.1483E-4:40:30:16:14:41 0/0:38:1:1:0:20:5%:27:5E-1:40:19:9:10:20 0/1:34:9:3:6:25:36%:30:8.1542E-4:40:16:12:4:25 0/0:36:6:1:5:22:27.27%:9:1.057E-2:44:16:7:9:23 0/0:38:1:0:1:15:6.67%:21:5E-1:38:14:8:6:16 0/0:32:1:0:1:9:11.11%:11:5E-1:35:8:3:5:11 0/0:38:1:1:0:17:5.88%:24:5E-1:41:16:6:10:20 0/1:36:9:3:6:30:30%:30:9.678E-4:36:21:11:10:34 0/0:35:6:2:4:29:20.69%:18:1.1736E-2:38:23:9:14:30 0/0:37:3:1:2:29:10.34%:31:1.1842E-1:37:26:10:16:29 0/0:37:3:0:3:27:11.11%:28:1.1792E-1:38:24:14:10:28 0/1:35:7:1:6:30:23.33%:22:5.2713E-3:36:23:9:14:31 0/0:34:3:1:2:32:9.38%:34:1.1905E-1:39:29:16:13:37 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:13 0/0:34:3:1:2:15:20%:11:1.1207E-1:40:12:5:7:16 0/1:35:6:1:5:19:31.58%:20:9.828E-3:38:13:8:5:22 0/1:36:13:6:7:34:38.24%:45:2.9583E-5:37:21:13:8:36 0/0:0:0:0:0:32:0%:59:1E0:34:32:13:19:36 0/0:36:5:1:4:21:23.81%:12:2.3921E-2:37:16:5:11:24 0/1:37:6:0:6:16:37.5%:20:8.837E-3:34:10:3:7:16 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:48:6:2:4:9 0/1:37:7:3:4:17:41.18%:24:3.6151E-3:39:10:4:6:17 0/0:33:4:1:3:24:16.67%:18:5.461E-2:38:20:8:12:25 0/0:32:4:0:4:10:40%:3:4.3344E-2:35:6:4:2:10 0/0:36:5:3:2:17:29.41%:8:2.2239E-2:36:12:5:7:17 0/0:37:2:0:2:16:12.5%:15:2.4194E-1:36:14:6:8:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:1:0:1:11:9.09%:14:5E-1:39:10:4:6:11 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:36:10:6:4:17 0/0:0:0:0:0:7:0%:14:1E0:38:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:28:2:0:2:8:25%:5:2.3333E-1:39:6:4:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:8:0%:14:1E0:37:8:5:3:9 0/1:35:6:2:4:16:37.5%:20:8.837E-3:41:10:6:4:20 0/1:37:8:1:7:16:50%:29:1.2236E-3:43:8:4:4:16 0/0:37:3:1:2:18:16.67%:14:1.1429E-1:39:15:8:7:18 0/0:35:3:1:2:16:18.75%:11:1.129E-1:43:13:7:6:16 0/1:36:9:2:7:23:39.13%:31:7.4174E-4:36:14:4:10:24 0/1:36:7:2:5:26:26.92%:23:4.9169E-3:40:19:12:7:27 0/0:35:2:0:2:12:16.67%:10:2.3913E-1:40:10:4:6:12 0/0:34:2:0:2:14:14.29%:12:2.4074E-1:44:12:6:6:16 0/0:36:3:0:3:23:13.04%:22:1.1667E-1:40:20:11:9:24 0/0:37:5:0:5:20:25%:10:2.3562E-2:35:15:10:5:21 0/0:37:4:0:4:15:26.67%:8:4.9808E-2:35:11:8:3:15 0/0:37:5:2:3:24:20.83%:14:2.4823E-2:38:19:10:9:24 0/1:36:7:0:7:27:25.93%:22:5.0143E-3:41:20:11:9:27 0/0:37:6:1:5:29:20.69%:18:1.1736E-2:39:23:10:13:30 0/0:37:3:0:3:13:25%:6:1.087E-1:43:9:4:5:17 MTB_anc 1637263 . T C . PASS AC=24;AF=0.085;AN=284;ANN=C|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.967A>G|p.Thr323Ala|967/2226|967/2226|323/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637263T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637263T>C||||||;HOM=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:6:2:4:29:20.69%:18:1.1736E-2:42:23:13:10:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:5:2:3:29:17.24%:22:2.5917E-2:39:24:15:9:31 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:10 0/0:35:1:0:1:27:3.7%:41:5E-1:38:26:14:12:29 0/0:38:1:1:0:9:11.11%:11:5E-1:44:8:4:4:9 0/0:35:4:1:3:18:22.22%:10:5.1948E-2:39:14:9:5:19 0/0:37:2:0:2:13:15.38%:13:2.4E-1:40:11:8:3:15 0/1:35:9:1:8:31:29.03%:30:9.9376E-4:38:22:12:10:32 0/1:36:6:2:4:10:60%:22:5.418E-3:39:4:1:3:11 0/0:37:3:0:3:16:18.75%:11:1.129E-1:47:13:6:7:16 0/0:37:5:3:2:17:29.41%:8:2.2239E-2:35:12:5:7:18 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:43:15:6:9:18 0/1:36:7:1:6:21:33.33%:23:4.3101E-3:41:14:5:9:22 0/0:38:2:1:1:18:11.11%:18:2.4286E-1:39:16:7:9:19 0/0:38:1:1:0:13:7.69%:18:5E-1:34:12:6:6:14 0/0:38:1:0:1:8:12.5%:8:5E-1:41:7:3:4:9 0/0:38:1:0:1:8:12.5%:8:5E-1:39:7:3:4:9 0/0:0:0:0:0:7:0%:14:1E0:39:7:2:5:7 0/0:38:1:0:1:8:12.5%:8:5E-1:38:7:3:4:10 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:15 0/1:35:7:4:3:23:30.43%:23:4.5803E-3:37:16:7:9:24 0/0:38:3:1:2:16:18.75%:11:1.129E-1:37:13:7:6:18 0/0:37:4:1:3:27:14.81%:23:5.5494E-2:41:23:14:9:29 0/1:36:8:5:3:22:36.36%:27:1.8042E-3:40:14:9:5:25 0/0:35:3:2:1:22:13.64%:19:1.1628E-1:41:19:13:6:24 0/0:35:3:2:1:15:20%:11:1.1207E-1:40:12:8:4:15 0/0:38:1:0:1:15:6.67%:21:5E-1:35:14:5:9:16 0/0:36:3:1:2:10:30%:4:1.0526E-1:43:7:5:2:12 0/0:35:4:0:4:27:14.81%:23:5.5494E-2:40:23:12:11:28 0/0:37:4:1:3:23:17.39%:18:5.4264E-2:39:19:10:9:24 0/0:36:3:0:3:20:15%:16:1.1538E-1:39:17:10:7:25 0/0:37:4:0:4:15:26.67%:8:4.9808E-2:45:11:4:7:18 0/0:0:0:0:0:9:0%:18:1E0:41:9:0:9:9 0/0:37:3:1:2:18:16.67%:14:1.1429E-1:41:15:5:10:19 0/0:34:4:1:3:22:18.18%:15:5.3885E-2:39:18:8:10:22 0/0:37:2:0:2:11:18.18%:10:2.381E-1:36:9:3:6:12 0/0:37:6:4:2:32:18.75%:20:1.2087E-2:44:26:15:11:34 0/0:37:6:2:4:23:26.09%:11:1.0777E-2:36:17:10:7:23 0/0:34:4:1:3:29:13.79%:26:5.5981E-2:42:25:16:9:30 0/0:37:4:0:4:21:19.05%:15:5.3471E-2:38:17:6:11:24 0/0:37:1:0:1:19:5.26%:28:5E-1:39:18:11:7:22 0/0:36:5:0:5:21:23.81%:12:2.3921E-2:38:16:5:11:21 0/0:38:1:0:1:25:4%:38:5E-1:42:24:12:12:26 0/0:33:2:0:2:21:9.52%:25:2.439E-1:40:19:9:10:21 0/0:36:6:3:3:28:21.43%:16:1.1603E-2:39:22:11:11:30 0/0:38:3:2:1:22:13.64%:19:1.1628E-1:40:19:10:9:22 0/0:37:2:1:1:14:14.29%:12:2.4074E-1:38:12:6:6:14 0/0:34:2:1:1:19:10.53%:21:2.4324E-1:40:17:7:10:20 0/0:37:4:0:4:23:17.39%:18:5.4264E-2:38:19:8:11:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:5:2:3:17:29.41%:8:2.2239E-2:38:12:6:6:20 0/0:33:2:0:2:15:13.33%:16:2.4138E-1:41:13:5:8:16 0/0:34:1:0:1:15:6.67%:21:5E-1:39:14:7:7:15 0/0:37:1:0:1:25:4%:38:5E-1:42:24:8:16:27 0/0:37:3:0:3:11:27.27%:7:1.0714E-1:37:8:3:5:13 0/0:28:2:0:2:10:20%:7:2.3684E-1:51:8:5:3:11 0/0:37:2:1:1:16:12.5%:15:2.4194E-1:39:14:7:7:16 0/0:37:2:0:2:15:13.33%:16:2.4138E-1:39:13:7:6:16 0/0:37:3:2:1:13:23.08%:9:1.1E-1:37:10:4:6:13 0/0:35:3:1:2:23:13.04%:22:1.1667E-1:39:20:15:5:25 0/0:34:1:0:1:12:8.33%:14:5E-1:34:11:2:9:13 0/0:38:2:0:2:18:11.11%:18:2.4286E-1:37:16:5:11:22 0/0:38:1:0:1:11:9.09%:14:5E-1:43:10:4:6:12 0/0:38:1:0:1:19:5.26%:28:5E-1:44:18:8:10:21 0/0:35:4:1:3:39:10.26%:41:5.7662E-2:40:35:19:16:40 0/0:36:4:0:4:14:28.57%:6:4.8889E-2:40:10:8:2:15 0/0:37:6:3:3:34:17.65%:23:1.2287E-2:42:28:18:10:35 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:0:3:17:17.65%:14:1.1364E-1:39:14:8:6:17 0/0:37:4:3:1:25:16%:21:5.4928E-2:40:21:10:11:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:5:3:2:26:19.23%:17:2.531E-2:42:21:10:11:29 0/0:37:3:0:3:26:11.54%:25:1.1765E-1:35:23:12:11:27 0/0:37:1:0:1:16:6.25%:21:5E-1:41:15:7:8:16 0/0:37:3:1:2:17:17.65%:14:1.1364E-1:42:14:8:6:18 0/0:38:2:1:1:16:12.5%:15:2.4194E-1:43:14:7:7:17 0/1:37:8:1:7:25:32%:26:2.0146E-3:38:17:10:7:26 0/0:37:1:0:1:8:12.5%:8:5E-1:40:7:3:4:8 0/0:31:1:0:1:10:10%:11:5E-1:38:9:4:5:11 0/0:37:4:1:3:17:23.53%:11:5.132E-2:43:13:5:8:20 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:37:15:8:7:17 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:21 0/0:37:3:0:3:12:25%:6:1.087E-1:41:9:6:3:13 0/0:0:0:0:0:18:0%:32:1E0:34:18:9:9:18 0/0:37:5:3:2:18:27.78%:8:2.2727E-2:39:13:7:6:18 0/0:38:2:1:1:9:22.22%:7:2.3529E-1:39:7:6:1:10 0/0:37:3:0:3:20:15%:16:1.1538E-1:39:17:10:7:21 0/0:36:2:1:1:17:11.76%:18:2.4242E-1:44:15:10:5:19 0/0:36:2:2:0:17:11.76%:18:2.4242E-1:40:15:7:8:17 0/0:37:1:0:1:19:5.26%:28:5E-1:44:18:8:10:20 0/1:36:8:0:8:32:25%:26:2.3764E-3:37:24:13:11:33 0/1:36:6:3:3:15:40%:20:8.4291E-3:36:9:5:4:15 0/1:36:8:4:4:29:27.59%:26:2.2392E-3:40:21:9:12:31 0/0:36:3:1:2:12:25%:6:1.087E-1:37:9:3:6:12 0/0:38:1:1:0:10:10%:11:5E-1:38:9:5:4:11 0/1:35:6:2:4:17:35.29%:20:9.2021E-3:42:11:9:2:19 0/0:34:5:0:5:26:19.23%:17:2.531E-2:38:21:12:9:28 0/1:36:11:1:10:39:28.21%:36:2.1547E-4:40:28:15:13:40 0/0:38:1:1:0:18:5.56%:24:5E-1:40:17:7:10:19 0/1:37:9:3:6:25:36%:30:8.1542E-4:39:16:12:4:25 0/0:35:6:1:5:22:27.27%:9:1.057E-2:43:16:6:10:23 0/0:37:1:0:1:14:7.14%:17:5E-1:36:13:7:6:15 0/0:35:1:0:1:10:10%:11:5E-1:35:9:4:5:11 0/0:38:1:1:0:15:6.67%:21:5E-1:42:14:6:8:17 0/1:37:8:3:5:31:25.81%:26:2.3332E-3:36:23:11:12:32 0/1:36:7:2:5:29:24.14%:22:5.1909E-3:39:22:8:14:30 0/0:37:3:1:2:24:12.5%:22:1.1702E-1:38:21:8:13:25 0/0:35:3:0:3:27:11.11%:28:1.1792E-1:38:24:13:11:27 0/1:36:7:1:6:29:24.14%:22:5.1909E-3:35:22:8:14:30 0/0:35:3:1:2:35:8.57%:40:1.1957E-1:37:32:16:16:36 0/0:24:1:0:1:12:8.33%:14:5E-1:36:11:1:10:14 0/0:37:3:1:2:13:23.08%:9:1.1E-1:41:10:5:5:14 0/1:35:6:1:5:19:31.58%:20:9.828E-3:40:13:7:6:22 0/1:36:13:6:7:34:38.24%:45:2.9583E-5:37:21:11:10:36 0/0:0:0:0:0:29:0%:55:1E0:34:29:12:17:35 0/0:35:5:1:4:20:25%:10:2.3562E-2:37:15:3:12:21 0/1:37:6:0:6:16:37.5%:20:8.837E-3:36:10:3:7:16 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:49:6:2:4:9 0/1:37:7:3:4:17:41.18%:24:3.6151E-3:40:10:4:6:17 0/0:35:4:1:3:25:16%:21:5.4928E-2:36:21:8:13:25 0/0:33:4:0:4:10:40%:3:4.3344E-2:35:6:4:2:10 0/0:35:5:3:2:15:33.33%:6:2.1073E-2:37:10:4:6:16 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:35:10:4:6:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:1:0:1:10:10%:11:5E-1:40:9:4:5:12 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:37:10:5:5:17 0/0:0:0:0:0:7:0%:14:1E0:40:7:0:7:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:2:0:2:8:25%:5:2.3333E-1:39:6:2:4:8 0/0:32:2:0:2:9:22.22%:7:2.3529E-1:37:7:4:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:8:0%:14:1E0:34:8:4:4:9 0/1:37:6:2:4:18:33.33%:20:9.5308E-3:37:12:7:5:20 0/1:37:8:1:7:15:53.33%:29:1.0995E-3:45:7:3:4:16 0/0:38:3:1:2:16:18.75%:11:1.129E-1:39:13:7:6:17 0/0:35:3:1:2:16:18.75%:11:1.129E-1:46:13:7:6:16 0/1:35:9:2:7:22:40.91%:31:7.0165E-4:35:13:3:10:24 0/1:36:7:2:5:26:26.92%:23:4.9169E-3:38:19:11:8:27 0/0:37:2:0:2:11:18.18%:10:2.381E-1:42:9:4:5:12 0/0:37:2:0:2:15:13.33%:16:2.4138E-1:43:13:6:7:16 0/0:37:3:0:3:23:13.04%:22:1.1667E-1:39:20:11:9:24 0/0:36:5:0:5:20:25%:10:2.3562E-2:33:15:9:6:20 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:35:10:7:3:14 0/0:37:5:2:3:24:20.83%:14:2.4823E-2:37:19:10:9:24 0/1:36:7:0:7:26:26.92%:23:4.9169E-3:40:19:10:9:27 0/0:37:6:1:5:30:20%:18:1.186E-2:39:24:10:14:30 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:42:10:4:6:16 MTB_anc 1637264 . G C . PASS AC=24;AF=0.085;AN=282;ANN=C|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.966C>G|p.Gly322Gly|966/2226|966/2226|322/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1637264G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1637264G>C||||||;HOM=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:6:2:4:29:20.69%:18:1.1736E-2:41:23:12:11:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:5:2:3:27:18.52%:19:2.5527E-2:40:22:14:8:27 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:10 0/0:28:1:0:1:28:3.57%:41:5E-1:38:27:13:14:29 0/0:38:1:1:0:9:11.11%:11:5E-1:47:8:4:4:9 0/0:36:4:1:3:19:21.05%:13:5.251E-2:40:15:10:5:19 0/0:37:2:0:2:14:14.29%:12:2.4074E-1:37:12:9:3:15 0/1:36:9:1:8:31:29.03%:30:9.9376E-4:39:22:12:10:32 0/1:37:6:2:4:11:54.55%:22:6.192E-3:39:5:2:3:11 0/0:37:3:0:3:16:18.75%:11:1.129E-1:45:13:6:7:16 0/0:37:5:3:2:18:27.78%:8:2.2727E-2:35:13:5:8:18 0/0:35:2:1:1:17:11.76%:18:2.4242E-1:44:15:6:9:18 0/1:36:6:1:5:18:33.33%:20:9.5308E-3:45:12:4:8:22 0/0:38:2:1:1:19:10.53%:21:2.4324E-1:41:17:8:9:19 0/0:38:1:1:0:14:7.14%:17:5E-1:35:13:7:6:14 0/0:38:1:0:1:9:11.11%:11:5E-1:40:8:3:5:9 0/0:32:2:0:2:10:20%:7:2.3684E-1:37:8:4:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:0:1:10:10%:11:5E-1:40:9:3:6:10 0/0:0:0:0:0:14:0%:25:1E0:40:14:6:8:15 0/0:37:6:4:2:23:26.09%:11:1.0777E-2:36:17:8:9:24 0/0:38:3:1:2:17:17.65%:14:1.1364E-1:37:14:7:7:18 0/0:35:4:1:3:26:15.38%:20:5.5222E-2:42:22:13:9:29 0/1:37:7:5:2:23:30.43%:23:4.5803E-3:40:16:10:6:25 0/0:35:3:2:1:22:13.64%:19:1.1628E-1:41:19:13:6:24 0/0:37:3:2:1:15:20%:11:1.1207E-1:41:12:8:4:15 0/0:38:1:0:1:15:6.67%:21:5E-1:35:14:5:9:15 0/0:33:3:1:2:10:30%:4:1.0526E-1:46:7:5:2:12 0/0:37:3:0:3:26:11.54%:25:1.1765E-1:41:23:13:10:28 0/0:37:4:1:3:22:18.18%:15:5.3885E-2:40:18:9:9:23 0/0:36:3:0:3:23:13.04%:22:1.1667E-1:40:20:13:7:25 0/0:36:4:0:4:18:22.22%:10:5.1948E-2:42:14:7:7:18 0/0:0:0:0:0:9:0%:18:1E0:41:9:0:9:9 0/0:35:3:1:2:18:16.67%:14:1.1429E-1:40:15:5:10:19 0/0:37:3:1:2:20:15%:16:1.1538E-1:40:17:8:9:22 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:37:10:4:6:12 0/1:35:7:4:3:33:21.21%:22:5.4855E-3:45:26:15:11:34 0/0:37:6:2:4:23:26.09%:11:1.0777E-2:37:17:10:7:23 0/0:36:4:1:3:30:13.33%:26:5.62E-2:42:26:17:9:30 0/0:34:4:0:4:24:16.67%:18:5.461E-2:37:20:8:12:24 0/0:35:1:0:1:19:5.26%:28:5E-1:40:18:12:6:21 0/0:36:5:0:5:21:23.81%:12:2.3921E-2:38:16:5:11:21 0/0:38:1:0:1:25:4%:38:5E-1:43:24:11:13:25 0/0:33:2:0:2:21:9.52%:25:2.439E-1:41:19:9:10:21 0/0:35:6:3:3:26:23.08%:13:1.1309E-2:41:20:11:9:28 0/0:36:3:2:1:22:13.64%:19:1.1628E-1:40:19:10:9:22 0/0:37:2:1:1:14:14.29%:12:2.4074E-1:39:12:6:6:14 0/0:38:1:1:0:18:5.56%:24:5E-1:42:17:7:10:20 0/0:37:4:0:4:23:17.39%:18:5.4264E-2:39:19:8:11:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:37:5:2:3:19:26.32%:10:2.3166E-2:38:14:7:7:20 0/0:33:2:0:2:16:12.5%:15:2.4194E-1:41:14:6:8:16 0/0:37:1:0:1:15:6.67%:21:5E-1:39:14:7:7:15 0/0:37:1:0:1:23:4.35%:34:5E-1:42:22:8:14:26 0/0:36:4:0:4:12:33.33%:4:4.6584E-2:39:8:3:5:13 0/0:37:1:0:1:9:11.11%:11:5E-1:48:8:5:3:11 0/0:37:2:1:1:16:12.5%:15:2.4194E-1:39:14:7:7:16 0/0:37:2:0:2:16:12.5%:15:2.4194E-1:40:14:8:6:16 0/0:37:3:2:1:12:25%:6:1.087E-1:37:9:4:5:12 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:40:20:15:5:25 0/0:30:1:0:1:13:7.69%:18:5E-1:35:12:3:9:13 0/0:38:2:0:2:20:10%:21:2.4359E-1:37:18:5:13:22 0/0:38:1:0:1:11:9.09%:14:5E-1:42:10:4:6:12 0/0:38:1:0:1:20:5%:27:5E-1:43:19:9:10:21 0/0:36:4:1:3:39:10.26%:41:5.7662E-2:40:35:19:16:40 0/0:34:4:0:4:15:26.67%:8:4.9808E-2:39:11:9:2:15 0/0:35:6:3:3:34:17.65%:23:1.2287E-2:42:28:17:11:35 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:0:3:17:17.65%:14:1.1364E-1:38:14:8:6:17 0/0:38:4:3:1:27:14.81%:23:5.5494E-2:41:23:12:11:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:5:3:2:28:17.86%:19:2.5729E-2:40:23:11:12:29 0/0:35:3:0:3:25:12%:25:1.1735E-1:37:22:12:10:27 0/0:37:1:0:1:16:6.25%:21:5E-1:42:15:7:8:16 0/0:35:4:2:2:17:23.53%:11:5.132E-2:43:13:7:6:19 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:40:15:8:7:17 0/1:35:8:1:7:25:32%:26:2.0146E-3:39:17:10:7:26 0/0:37:1:0:1:8:12.5%:8:5E-1:40:7:3:4:8 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:10 0/0:37:4:1:3:18:22.22%:10:5.1948E-2:45:14:5:9:20 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:38:15:8:7:17 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:21 0/0:35:3:0:3:11:27.27%:4:1.0526E-1:44:7:5:2:13 0/0:0:0:0:0:18:0%:32:1E0:34:18:9:9:18 0/0:37:5:3:2:16:31.25%:6:2.1691E-2:41:11:6:5:18 0/0:38:2:1:1:9:22.22%:7:2.3529E-1:40:7:6:1:10 0/0:37:3:0:3:20:15%:16:1.1538E-1:39:17:10:7:20 0/0:34:2:1:1:16:12.5%:15:2.4194E-1:45:14:10:4:18 0/0:36:2:2:0:17:11.76%:18:2.4242E-1:40:15:7:8:17 0/0:37:1:0:1:18:5.56%:24:5E-1:45:17:7:10:20 0/1:35:8:0:8:31:25.81%:26:2.3332E-3:40:23:13:10:32 0/1:36:6:3:3:15:40%:20:8.4291E-3:39:9:5:4:15 0/1:36:8:4:4:31:25.81%:26:2.3332E-3:40:23:11:12:31 0/0:37:2:1:1:11:18.18%:10:2.381E-1:36:9:3:6:12 0/0:38:1:1:0:11:9.09%:14:5E-1:36:10:6:4:11 0/1:34:6:2:4:18:33.33%:20:9.5308E-3:41:12:10:2:19 0/0:34:5:0:5:27:18.52%:19:2.5527E-2:39:22:13:9:28 0/1:37:10:1:9:39:25.64%:32:5.0524E-4:40:29:15:14:40 0/0:38:1:1:0:19:5.26%:24:5E-1:41:17:8:9:19 0/1:35:9:3:6:25:36%:30:8.1542E-4:41:16:12:4:25 0/0:36:6:1:5:22:27.27%:9:1.057E-2:44:16:6:10:23 0/0:34:1:0:1:14:7.14%:17:5E-1:38:13:7:6:15 0/0:29:1:0:1:9:11.11%:11:5E-1:36:8:4:4:11 0/0:38:1:1:0:17:5.88%:24:5E-1:41:16:6:10:17 0/1:37:9:3:6:31:29.03%:30:9.9376E-4:37:22:10:12:31 0/1:35:7:2:5:30:23.33%:22:5.2713E-3:38:23:9:14:30 0/0:37:3:1:2:25:12%:25:1.1735E-1:39:22:8:14:25 0/0:35:3:0:3:27:11.11%:28:1.1792E-1:39:24:13:11:27 0/1:36:7:1:6:29:24.14%:22:5.1909E-3:38:22:8:14:29 0/0:35:3:1:2:35:8.57%:40:1.1957E-1:38:32:15:17:36 0/0:24:1:0:1:14:7.14%:17:5E-1:34:13:2:11:14 0/0:36:3:1:2:13:23.08%:9:1.1E-1:42:10:5:5:14 0/1:35:6:1:5:19:31.58%:20:9.828E-3:40:13:7:6:22 0/1:36:13:6:7:33:39.39%:45:2.8029E-5:37:20:11:9:36 0/0:0:0:0:0:34:0%:62:1E0:34:34:12:22:35 0/0:36:5:1:4:21:23.81%:10:2.3562E-2:37:15:4:11:21 0/1:36:6:0:6:15:40%:20:8.4291E-3:36:9:2:7:16 0/0:35:3:0:3:9:33.33%:4:1.0294E-1:48:6:2:4:9 0/1:37:7:3:4:17:41.18%:24:3.6151E-3:41:10:4:6:17 0/0:37:3:1:2:23:13.04%:22:1.1667E-1:37:20:7:13:25 0/0:33:3:0:3:9:33.33%:4:1.0294E-1:36:6:4:2:10 0/0:35:4:3:1:15:26.67%:8:4.9808E-2:37:11:4:7:16 0/0:37:2:0:2:14:14.29%:12:2.4074E-1:35:12:5:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:1:0:1:12:8.33%:14:5E-1:39:11:4:7:12 0/0:37:4:0:4:17:23.53%:11:5.132E-2:37:13:6:7:17 0/0:0:0:0:0:8:0%:14:1E0:42:8:0:8:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:34:1:0:1:7:14.29%:8:5E-1:39:6:2:4:8 0/0:30:2:0:2:9:22.22%:7:2.3529E-1:37:7:4:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:9 0/1:36:7:2:5:18:38.89%:24:3.8123E-3:37:11:6:5:19 0/1:37:8:1:7:16:50%:29:1.2236E-3:43:8:4:4:16 0/0:37:3:1:2:17:17.65%:14:1.1364E-1:39:14:8:6:17 0/0:35:3:1:2:16:18.75%:11:1.129E-1:46:13:7:6:16 0/1:36:9:2:7:23:39.13%:31:7.4174E-4:36:14:4:10:24 0/1:36:7:2:5:24:29.17%:23:4.7006E-3:41:17:10:7:27 0/0:37:2:0:2:11:18.18%:10:2.381E-1:39:9:4:5:12 0/0:34:2:0:2:16:12.5%:15:2.4194E-1:42:14:6:8:16 0/0:37:3:0:3:22:13.64%:19:1.1628E-1:41:19:11:8:24 0/0:35:5:0:5:19:26.32%:10:2.3166E-2:35:14:8:6:20 0/0:36:4:0:4:13:30.77%:6:4.7826E-2:35:9:6:3:14 0/0:37:5:2:3:24:20.83%:14:2.4823E-2:38:19:10:9:24 0/1:36:7:0:7:27:25.93%:22:5.0143E-3:40:20:11:9:27 0/0:37:6:1:5:30:20%:18:1.186E-2:40:24:10:14:30 0/0:35:4:0:4:14:28.57%:6:4.8889E-2:41:10:4:6:16 MTB_anc 1638020 . T C . PASS AC=4;AF=1.00;AN=4;ANN=C|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.210A>G|p.Ala70Ala|210/2226|210/2226|70/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638020T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638020T>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 1638125 . T C . PASS AC=58;AF=1.00;AN=58;ANN=C|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.105A>G|p.Ser35Ser|105/2226|105/2226|35/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638125T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638125T>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 1638140 . G C . PASS AC=54;AF=1.00;AN=54;ANN=C|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.90C>G|p.Ser30Arg|90/2226|90/2226|30/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638140G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638140G>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:4:3:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1638141 . C G . PASS AC=52;AF=1.00;AN=52;ANN=G|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.89G>C|p.Ser30Thr|89/2226|89/2226|30/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638141C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638141C>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:4:3:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1638142 . T C . PASS AC=52;AF=1.00;AN=52;ANN=C|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.88A>G|p.Ser30Gly|88/2226|88/2226|30/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638142T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638142T>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:7:3:11:90.91%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:4:3:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1638143 . G A . PASS AC=52;AF=1.00;AN=52;ANN=A|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.87C>T|p.Asn29Asn|87/2226|87/2226|29/741||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638143G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638143G>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1638149 . T C . PASS AC=52;AF=1.00;AN=52;ANN=C|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.81A>G|p.Val27Val|81/2226|81/2226|27/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638149T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638149T>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1638150 . A G . PASS AC=52;AF=1.00;AN=52;ANN=G|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.80T>C|p.Val27Ala|80/2226|80/2226|27/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638150A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638150A>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1638152 . A G . PASS AC=58;AF=1.00;AN=58;ANN=G|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.78T>C|p.Gly26Gly|78/2226|78/2226|26/741||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638152A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638152A>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:8:2:11:90.91%:47:1.7011E-5:37:1:1:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1638211 . T C . PASS AC=82;AF=0.331;AN=248;ANN=C|missense_variant|MODERATE|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.19A>G|p.Thr7Ala|19/2226|19/2226|7/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638211T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638211T>C||||||;HET=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:32:0%:59:1E0:35:32:17:15:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:15:0%:29:1E0:34:15:9:6:15 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:12:0%:21:1E0:34:12:6:6:13 0/0:0:0:0:0:10:0%:17:1E0:34:10:6:4:10 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:35:8:5:3:8 0/0:0:0:0:0:8:0%:14:1E0:39:8:6:2:9 0/0:0:0:0:0:10:0%:17:1E0:33:10:6:4:12 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:9:0%:18:1E0:37:9:6:3:10 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:14:0%:25:1E0:35:14:9:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:35:9:5:4:9 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:10 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:13 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:13:0%:25:1E0:34:13:5:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:18 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:13 0/0:0:0:0:0:13:0%:25:1E0:34:13:8:5:13 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 0/0:38:1:1:0:19:5.26%:28:5E-1:34:18:13:5:19 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:14:0%:25:1E0:34:14:11:3:15 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:36:14:10:4:14 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:9:0%:18:1E0:34:9:6:3:10 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:25:1E0:33:13:9:4:14 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:13 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:12 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:19 0/0:0:0:0:0:9:0%:18:1E0:34:9:7:2:9 0/0:0:0:0:0:21:0%:40:1E0:35:21:13:8:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:14:0%:25:1E0:34:14:10:4:14 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:13 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:15:0%:29:1E0:34:15:7:8:15 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 0/0:0:0:0:0:14:0%:25:1E0:35:14:8:6:15 0/0:0:0:0:0:12:0%:21:1E0:39:12:6:6:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:33:13:11:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:17:0%:33:1E0:36:17:12:5:17 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:13:0%:25:1E0:33:13:5:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:13 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:18 0/0:0:0:0:0:17:0%:33:1E0:33:17:10:7:19 0/0:0:0:0:0:15:0%:29:1E0:36:15:10:5:16 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:19 0/0:0:0:0:0:11:0%:22:1E0:34:11:7:4:12 0/0:0:0:0:0:20:0%:36:1E0:33:20:15:5:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:35:15:12:3:17 0/0:0:0:0:0:7:0%:14:1E0:36:7:6:1:7 0/0:0:0:0:0:17:0%:33:1E0:35:17:10:7:17 0/0:0:0:0:0:25:0%:48:1E0:35:25:15:10:27 0/0:0:0:0:0:21:0%:40:1E0:36:21:16:5:23 0/0:0:0:0:0:19:0%:37:1E0:35:19:14:5:21 0/0:0:0:0:0:18:0%:32:1E0:33:18:14:4:18 0/0:0:0:0:0:14:0%:25:1E0:35:14:8:6:15 0/0:0:0:0:0:11:0%:22:1E0:38:11:8:3:12 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:12 0/0:0:0:0:0:16:0%:29:1E0:34:16:11:5:17 0/0:0:0:0:0:16:0%:29:1E0:33:16:12:4:18 0/0:0:0:0:0:19:0%:37:1E0:34:19:16:3:20 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:9 0/0:0:0:0:0:17:0%:33:1E0:35:17:11:6:18 0/0:0:0:0:0:28:0%:51:1E0:35:28:18:10:28 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:16 0/0:0:0:0:0:11:0%:22:1E0:33:11:6:5:12 0/0:0:0:0:0:18:0%:32:1E0:34:18:16:2:20 0/0:0:0:0:0:10:0%:17:1E0:33:10:8:2:12 0/0:0:0:0:0:20:0%:36:1E0:35:20:15:5:21 0/0:0:0:0:0:16:0%:29:1E0:34:16:11:5:18 0/0:0:0:0:0:13:0%:25:1E0:33:13:7:6:14 0/0:0:0:0:0:19:0%:37:1E0:36:19:12:7:19 0/0:0:0:0:0:14:0%:25:1E0:33:14:11:3:15 0/0:0:0:0:0:7:0%:14:1E0:33:7:2:5:9 0/0:0:0:0:0:11:0%:22:1E0:34:11:6:5:13 0/0:0:0:0:0:13:0%:25:1E0:33:13:9:4:16 0/0:0:0:0:0:14:0%:25:1E0:34:14:9:5:17 0/0:0:0:0:0:13:0%:25:1E0:34:13:9:4:14 0/0:0:0:0:0:11:0%:17:1E0:37:10:7:3:11 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:20:0%:36:1E0:34:20:17:3:21 0/0:0:0:0:0:17:0%:33:1E0:33:17:10:7:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:33:10:9:1:13 0/0:0:0:0:0:19:0%:37:1E0:35:19:12:7:19 0/0:0:0:0:0:12:0%:21:1E0:34:12:6:6:13 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:10 0/0:0:0:0:0:8:0%:14:1E0:33:8:6:2:8 0/0:0:0:0:0:17:0%:33:1E0:34:17:11:6:17 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 MTB_anc 1638212 . T C . PASS AC=83;AF=0.329;AN=252;ANN=C|synonymous_variant|LOW|PE_PGRS28_Rv1452c|gene1486|transcript|Transcript_gene1486|Coding|1/1|c.18A>G|p.Val6Val|18/2226|18/2226|6/741||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1638212T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1638212T>C||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:35:8:4:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:15 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:13:0%:25:1E0:34:13:7:6:13 0/0:0:0:0:0:9:0%:18:1E0:35:9:6:3:10 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:35:8:5:3:8 0/0:0:0:0:0:10:0%:17:1E0:37:10:8:2:10 0/0:0:0:0:0:11:0%:22:1E0:33:11:6:5:12 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:10:0%:17:1E0:38:10:7:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:35:13:9:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:34:9:6:3:10 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:10 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:13 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:13 0/1:37:6:3:3:7:85.71%:26:2.331E-3:38:1:1:0:7 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:18 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 0/0:0:0:0:0:13:0%:25:1E0:35:13:8:5:13 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 0/0:38:1:1:0:18:5.56%:24:5E-1:35:17:12:5:19 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:16:0%:29:1E0:34:16:13:3:16 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:37:14:10:4:14 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:10:0%:17:1E0:35:10:7:3:11 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:35:14:9:5:14 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:13 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:12 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:19 0/0:0:0:0:0:9:0%:18:1E0:37:9:7:2:9 0/0:0:0:0:0:20:0%:36:1E0:35:20:12:8:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:14 0/0:0:0:0:0:13:0%:25:1E0:35:13:8:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:13 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:15 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:15 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:14 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 0/0:0:0:0:0:12:0%:21:1E0:34:12:10:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:18:0%:32:1E0:37:18:13:5:18 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:13:0%:25:1E0:34:13:5:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:13 0/0:0:0:0:0:18:0%:32:1E0:36:18:10:8:18 0/0:0:0:0:0:19:0%:37:1E0:34:19:11:8:19 0/0:0:0:0:0:16:0%:29:1E0:35:16:11:5:16 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:19 0/0:0:0:0:0:12:0%:21:1E0:34:12:7:5:12 0/0:0:0:0:0:21:0%:40:1E0:33:21:16:5:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:17:0%:33:1E0:34:17:14:3:17 0/0:0:0:0:0:7:0%:14:1E0:37:7:6:1:7 0/0:0:0:0:0:17:0%:33:1E0:35:17:10:7:17 0/0:0:0:0:0:26:0%:47:1E0:35:26:16:10:27 0/0:0:0:0:0:23:0%:44:1E0:35:23:17:6:23 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:21 0/0:0:0:0:0:17:0%:33:1E0:35:17:13:4:18 0/0:0:0:0:0:15:0%:29:1E0:34:15:9:6:15 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:12 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:12 0/0:0:0:0:0:16:0%:29:1E0:34:16:12:4:17 0/0:0:0:0:0:17:0%:33:1E0:34:17:12:5:18 0/0:0:0:0:0:19:0%:37:1E0:35:19:15:4:20 0/0:0:0:0:0:9:0%:18:1E0:33:9:7:2:9 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:18 0/0:0:0:0:0:27:0%:52:1E0:35:27:18:9:28 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:16 0/0:0:0:0:0:11:0%:22:1E0:33:11:6:5:12 0/0:0:0:0:0:20:0%:36:1E0:34:20:17:3:20 0/0:0:0:0:0:12:0%:21:1E0:34:12:9:3:12 0/0:0:0:0:0:20:0%:36:1E0:36:20:16:4:21 0/0:0:0:0:0:18:0%:32:1E0:35:18:12:6:18 0/0:0:0:0:0:14:0%:25:1E0:34:14:8:6:14 0/0:0:0:0:0:20:0%:36:1E0:35:20:13:7:21 0/0:0:0:0:0:14:0%:25:1E0:34:14:12:2:15 0/0:0:0:0:0:9:0%:18:1E0:33:9:3:6:9 0/0:0:0:0:0:13:0%:25:1E0:34:13:7:6:13 0/0:0:0:0:0:16:0%:29:1E0:32:16:11:5:16 0/0:0:0:0:0:15:0%:29:1E0:34:15:11:4:17 0/0:0:0:0:0:14:0%:25:1E0:34:14:10:4:14 0/0:0:0:0:0:12:0%:21:1E0:38:12:7:5:12 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:21:0%:40:1E0:35:21:17:4:21 0/0:0:0:0:0:18:0%:32:1E0:34:18:11:7:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:31:12:11:1:13 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:20 0/0:0:0:0:0:13:0%:25:1E0:34:13:7:6:13 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:11 0/0:0:0:0:0:8:0%:14:1E0:34:8:6:2:8 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:17 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 MTB_anc 1638364 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|PE_PGRS28_Rv1452c-Rv1453_Rv1453|gene1486-gene1487|intergenic_region|gene1486-gene1487|||n.1638364T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:52:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:17:7:25:96%:99:2.0568E-13:39:1:0:1:25 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:27:17:10:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:17:18:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:43:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:53:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:27:23:4:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:60:40:20:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 1639418 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv1453_Rv1453|gene1487|transcript|Transcript_gene1487|Coding|1/1|c.1038G>A|p.Leu346Leu|1038/1266|1038/1266|346/421||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1639418G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1639418G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:54:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:49:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:64:41:23:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:38:21:17:39:97.44%:99:1.4697E-21:39:1:0:1:41 1/1:44:63:33:30:63:100%:99:1.657E-37:0:0:0:0:65 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 1639643 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv1453_Rv1453|gene1487|transcript|Transcript_gene1487|Coding|1/1|c.1263C>T|p.Arg421Arg|1263/1266|1263/1266|421/421||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1639643C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1639643C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:37:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:39:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:35:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:36:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:27:9:18:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 MTB_anc 1640442 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|qor_Rv1454c|gene1488|transcript|Transcript_gene1488|Coding|1/1|c.219A>G|p.Gly73Gly|219/987|219/987|73/328||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1640442T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1640442T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:47:36:11:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:39:22:17:40:97.5%:99:3.8137E-22:60:1:0:1:40 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:9:13:24:91.67%:99:1.0078E-11:38:2:1:1:24 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:41:18:23:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:63:39:24:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:23:14:38:97.37%:99:5.7269E-22:0:0:0:0:43 1/1:38:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 1644248 . G GGGCGCGGTTCACGAGCGCCGCTCCTCCTCATCGCTTCGCTCTGCATCGTCGTC . PASS AC=51;AF=0.172;AN=296;ANN=GGGCGCGGTTCACGAGCGCCGCTCCTCCTCATCGCTTCGCTCTGCATCGTCGTC|frameshift_variant&stop_gained|HIGH|Rv1458c_Rv1458c|gene1492|transcript|Transcript_gene1492|Coding|1/1|c.12_13insGACGACGATGCAGAGCGAAGCGATGAGGAGGAGCGGCGCTCGTGAACCGCGCC|p.Pro5fs|12/942|12/942|4/313||,GGGCGCGGTTCACGAGCGCCGCTCCTCCTCATCGCTTCGCTCTGCATCGTCGTC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1644248_1644249insGGCGCGGTTCACGAGCGCCGCTCCTCCTCATCGCTTCGCTCTGCATCGTCGTC||||||,GGGCGCGGTTCACGAGCGCCGCTCCTCCTCATCGCTTCGCTCTGCATCGTCGTC|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1644248_1644249insGGCGCGGTTCACGAGCGCCGCTCCTCCTCATCGCTTCGCTCTGCATCGTCGTC||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:34:2:0:2:29:6.9%:37:2.4561E-1:36:27:9:18:29 0/0:0:0:0:0:11:0%:22:1E0:39:11:5:6:11 0/1:43:7:3:4:21:33.33%:23:4.3101E-3:38:14:10:4:21 0/1:38:10:2:8:23:43.48%:35:2.8066E-4:41:13:5:8:23 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:22 0/1:34:6:2:4:14:42.86%:20:7.971E-3:36:8:3:5:15 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:23 0/0:0:0:0:0:15:0%:29:1E0:42:15:3:12:15 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:39:15:8:7:17 0/0:35:5:3:2:19:26.32%:8:2.2727E-2:42:13:7:6:21 0/0:38:6:3:3:20:30%:7:1.0098E-2:39:14:5:9:20 0/1:34:12:4:8:22:50%:44:3.8815E-5:37:12:6:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:13:4:9:31:40.62%:45:2.6443E-5:39:19:8:11:32 0/1:34:7:4:3:22:31.82%:23:4.4505E-3:38:15:5:10:22 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:18 0/1:42:7:3:4:18:38.89%:24:3.8123E-3:40:11:3:8:18 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:12 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:17 0/1:38:12:6:6:15:80%:52:5.2605E-6:38:3:1:2:15 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:19 0/1:32:7:2:5:24:28%:23:4.8126E-3:36:18:5:13:25 0/1:43:7:1:6:12:58.33%:26:2.2883E-3:41:5:3:2:12 0/1:35:7:0:7:27:25.93%:23:4.9169E-3:38:19:7:12:28 0/1:36:11:4:7:24:44%:39:1.1933E-4:37:14:4:10:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:36:2:0:2:11:18.18%:10:2.381E-1:37:9:4:5:11 0/0:0:0:0:0:11:0%:22:1E0:41:11:1:10:11 0/1:35:8:3:5:18:44.44%:28:1.4461E-3:37:10:3:7:18 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:21 0/0:0:0:0:0:16:0%:29:1E0:36:16:3:13:16 0/1:39:7:2:5:21:33.33%:23:4.3101E-3:36:14:6:8:21 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:18 0/0:0:0:0:0:13:0%:25:1E0:35:13:4:9:13 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:20 0/1:35:6:2:4:17:35.29%:20:9.2021E-3:37:11:2:9:17 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:17 0/1:37:14:6:8:32:43.75%:50:9.1194E-6:37:17:7:10:34 0/0:39:1:1:0:25:4%:38:5E-1:37:24:10:14:25 0/0:34:1:0:1:36:2.78%:55:5E-1:37:35:10:25:36 0/1:37:9:2:7:27:33.33%:30:8.8132E-4:37:18:7:11:27 0/1:32:9:3:6:24:36%:30:8.1542E-4:40:16:4:12:25 0/0:33:2:0:2:20:10%:21:2.4359E-1:37:18:4:14:22 0/0:39:1:1:0:24:4.17%:34:5E-1:37:23:10:13:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:4:16:23 0/1:36:11:4:7:22:50%:40:8.2399E-5:42:10:4:6:22 0/1:37:7:3:4:18:38.89%:24:3.8123E-3:38:11:6:5:18 0/0:60:1:0:1:32:3.12%:48:5E-1:37:31:11:20:32 0/0:37:1:0:1:27:3.7%:38:5E-1:38:25:10:15:28 0/0:0:0:0:0:21:0%:40:1E0:35:21:9:12:21 0/0:37:2:0:2:11:18.18%:7:2.3684E-1:38:8:1:7:11 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:27 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 0/0:37:3:0:3:17:17.65%:11:1.129E-1:39:13:3:10:17 0/1:33:6:1:5:20:30%:20:9.828E-3:36:13:6:7:21 0/1:34:15:7:8:31:48.39%:54:3.2298E-6:38:16:9:7:33 0/0:37:1:0:1:25:4%:38:5E-1:39:24:8:16:25 0/0:0:0:0:0:13:0%:25:1E0:36:13:3:10:13 0/1:35:11:3:8:26:42.31%:38:1.2791E-4:36:15:4:11:26 0/0:34:4:1:3:12:33.33%:4:4.6584E-2:39:8:4:4:12 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:12 0/0:0:0:0:0:19:0%:37:1E0:35:19:7:12:19 0/0:0:0:0:0:20:0%:36:1E0:39:20:5:15:20 0/0:37:6:2:4:22:27.27%:7:1.0098E-2:45:14:3:11:22 0/1:35:7:1:6:19:36.84%:23:3.9926E-3:37:12:6:6:19 0/1:35:9:1:8:31:29.03%:30:9.678E-4:36:21:9:12:33 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:25 0/1:36:10:2:8:24:41.67%:35:2.9985E-4:40:14:9:5:24 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:10 0/0:0:0:0:0:11:0%:22:1E0:44:11:2:9:11 0/0:39:1:1:0:28:3.57%:41:5E-1:39:27:10:17:28 0/0:0:0:0:0:17:0%:33:1E0:39:17:4:13:17 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/1:33:9:2:7:25:36%:30:8.1542E-4:37:16:5:11:25 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:18 0/1:37:7:3:4:20:35%:23:3.9926E-3:38:12:3:9:20 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:16 0/1:39:8:3:5:13:61.54%:30:8.238E-4:37:5:0:5:13 0/0:37:5:3:2:23:21.74%:14:2.4548E-2:37:18:5:13:24 0/0:0:0:0:0:10:0%:17:1E0:39:10:4:6:10 0/1:38:9:6:3:29:31.03%:30:9.1169E-4:38:19:6:13:29 0/0:35:4:2:2:26:15.38%:21:5.4928E-2:37:21:8:13:26 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:15 0/1:37:7:3:4:21:33.33%:23:4.3101E-3:37:14:9:5:21 0/1:32:10:4:6:23:41.67%:35:2.9985E-4:38:14:6:8:24 0/1:38:10:3:7:21:45.45%:35:2.6061E-4:39:12:6:6:22 0/1:36:7:1:6:13:53.85%:25:2.6087E-3:40:6:3:3:13 0/1:38:9:3:6:16:56.25%:34:3.4983E-4:37:6:4:2:16 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:16 0/0:39:1:0:1:18:5.56%:24:5E-1:38:17:8:9:18 0/1:38:7:0:7:15:46.67%:25:2.8986E-3:38:7:3:4:15 0/0:0:0:0:0:26:0%:47:1E0:36:26:6:20:27 0/1:33:6:2:4:17:33.33%:20:9.5308E-3:36:12:4:8:18 0/1:37:7:3:4:26:26.92%:23:4.8126E-3:36:18:8:10:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:33:1:0:1:22:4.55%:31:5E-1:38:21:5:16:22 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:31 0/1:36:8:3:5:23:34.78%:27:1.8791E-3:36:15:6:9:24 0/0:0:0:0:0:24:0%:44:1E0:36:24:8:16:24 0/0:0:0:0:0:29:0%:55:1E0:37:29:7:22:29 0/0:0:0:0:0:32:0%:59:1E0:37:32:11:21:32 0/0:0:0:0:0:17:0%:33:1E0:35:17:7:10:18 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:11 0/1:32:6:2:4:14:40%:20:7.971E-3:37:8:2:6:16 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:22 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:19 0/0:0:0:0:0:22:0%:40:1E0:37:22:4:18:22 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:16 0/0:33:1:1:0:18:5.56%:24:5E-1:38:16:8:8:19 0/0:0:0:0:0:24:0%:44:1E0:36:24:9:15:24 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:15 0/0:0:0:0:0:16:0%:29:1E0:34:16:4:12:18 0/0:33:1:1:0:25:4%:38:5E-1:38:24:7:17:25 0/0:0:0:0:0:30:0%:55:1E0:36:30:10:20:31 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:17:0%:33:1E0:36:17:8:9:18 0/0:0:0:0:0:23:0%:44:1E0:37:23:4:19:24 0/0:32:1:1:0:14:7.14%:17:5E-1:36:13:3:10:15 0/1:34:7:2:5:20:33.33%:23:4.3101E-3:36:14:3:11:21 0/0:31:1:0:1:32:3.12%:48:5E-1:36:31:6:25:32 0/0:39:1:1:0:11:9.09%:14:5E-1:37:10:3:7:11 0/1:35:10:3:7:23:43.48%:35:2.8066E-4:36:13:2:11:23 0/1:34:9:4:5:21:40.91%:31:7.0165E-4:36:13:6:7:22 0/1:33:11:4:7:17:57.89%:42:6.2811E-5:36:8:3:5:20 0/1:31:9:2:7:25:33.33%:30:8.8132E-4:36:18:6:12:27 0/0:25:1:0:1:29:3.45%:45:5E-1:36:28:7:21:32 0/0:0:0:0:0:21:0%:40:1E0:36:21:4:17:21 0/0:32:2:1:1:28:7.14%:34:2.4545E-1:35:26:9:17:28 0/1:33:11:4:7:24:44%:39:1.1933E-4:37:14:4:10:26 0/0:36:4:3:1:17:23.53%:11:5.132E-2:36:13:4:9:17 0/1:37:9:5:4:23:39.13%:31:7.4174E-4:36:14:5:9:23 0/0:0:0:0:0:23:0%:44:1E0:36:23:8:15:23 0/0:35:5:1:4:17:29.41%:8:2.2239E-2:36:12:2:10:17 0/0:43:4:2:2:17:23.53%:11:5.132E-2:37:13:6:7:17 0/0:39:1:0:1:19:5.26%:28:5E-1:37:18:4:14:19 0/1:35:11:4:7:35:31.43%:37:1.8662E-4:37:23:7:16:35 0/1:36:10:1:9:24:41.67%:35:2.6061E-4:37:12:2:10:26 0/1:40:8:2:6:18:44.44%:28:1.4461E-3:37:10:2:8:18 0/0:39:1:1:0:22:4.55%:31:5E-1:36:21:6:15:23 0/0:29:2:1:1:26:7.69%:30:2.451E-1:37:24:6:18:26 0/0:37:4:1:3:11:36.36%:4:4.5113E-2:36:7:2:5:11 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:19 0/0:37:4:1:3:13:30.77%:6:4.7826E-2:38:9:4:5:13 0/0:33:1:0:1:10:10%:11:5E-1:36:9:6:3:10 0/0:0:0:0:0:12:0%:21:1E0:37:12:5:7:12 0/0:36:4:2:2:10:40%:3:4.3344E-2:41:6:2:4:10 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:21 0/0:38:1:1:0:31:3.23%:48:5E-1:37:30:9:21:31 0/1:38:6:3:3:17:35.29%:20:9.2021E-3:37:11:3:8:17 MTB_anc 1644334 . G GCTTCGCTCTGCATCGTCGTCGGCGCGGTTCACG . PASS AC=1;AF=3.333e-03;AN=300;ANN=GCTTCGCTCTGCATCGTCGTCGGCGCGGTTCACG|intergenic_region|MODIFIER|Rv1458c_Rv1458c-Rv1459c_Rv1459c|gene1492-gene1493|intergenic_region|gene1492-gene1493|||n.1644334_1644335insCTTCGCTCTGCATCGTCGTCGGCGCGGTTCACG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:39:47:22:25:47 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:28:14:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:41 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:44:0%:81:1E0:47:44:19:25:44 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:25:0%:48:1E0:48:25:8:17:25 0/0:0:0:0:0:33:0%:63:1E0:51:33:18:15:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:37 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:31:0%:59:1E0:42:31:9:22:32 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:42 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:45 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:18 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:37:1:1:0:38:2.63%:58:5E-1:45:37:15:22:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:10:27:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:41:0%:78:1E0:44:41:13:28:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:44 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:52:0%:96:1E0:43:52:20:32:53 0/0:0:0:0:0:60:0%:99:1E0:42:60:23:37:62 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:34 0/0:0:0:0:0:46:0%:85:1E0:44:46:17:29:46 0/0:0:0:0:0:35:0%:67:1E0:39:35:10:25:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:16:27:43 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:49:0%:93:1E0:41:49:19:30:51 0/1:37:7:3:4:38:18.42%:22:5.721E-3:45:30:10:20:40 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:42 0/0:0:0:0:0:16:0%:29:1E0:48:16:9:7:18 0/0:0:0:0:0:53:0%:99:1E0:45:53:29:24:58 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:43 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:30 0/0:0:0:0:0:45:0%:85:1E0:47:45:18:27:45 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:23 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:15:26:44 0/0:0:0:0:0:28:0%:51:1E0:47:28:5:23:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:30 0/0:0:0:0:0:61:0%:99:1E0:43:61:23:38:62 0/0:20:1:1:0:33:3.03%:52:5E-1:42:32:10:22:33 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:19:0%:37:1E0:46:19:5:14:19 0/0:0:0:0:0:51:0%:97:1E0:43:51:19:32:51 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:21 0/0:0:0:0:0:53:0%:99:1E0:47:53:21:32:55 0/0:0:0:0:0:50:0%:92:1E0:40:50:28:22:51 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:60:1:1:0:37:2.7%:59:5E-1:44:36:10:26:37 0/0:0:0:0:0:41:0%:78:1E0:40:41:16:25:42 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:26 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:33 0/0:0:0:0:0:47:0%:89:1E0:46:47:28:19:47 0/0:0:0:0:0:15:0%:29:1E0:43:15:4:11:15 0/0:0:0:0:0:51:0%:97:1E0:40:51:15:36:52 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:18 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:10:23:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:10:23:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:7:18:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:44 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:32 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:24 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:7:18:26 0/0:0:0:0:0:37:0%:70:1E0:40:37:12:25:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:38 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:23 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:47:0%:89:1E0:39:47:19:28:52 0/0:0:0:0:0:36:0%:66:1E0:40:36:12:24:39 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:46 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:33 0/0:0:0:0:0:57:0%:99:1E0:41:57:28:29:59 0/0:0:0:0:0:66:0%:99:1E0:42:66:24:42:69 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:33 0/0:0:0:0:0:47:0%:89:1E0:38:47:24:23:49 0/0:32:1:0:1:37:2.7%:59:5E-1:40:36:16:20:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:33 0/0:0:0:0:0:50:0%:92:1E0:38:50:15:35:51 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:45 0/0:0:0:0:0:46:0%:85:1E0:39:46:18:28:48 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:39 0/0:0:0:0:0:48:0%:89:1E0:39:48:17:31:50 0/0:0:0:0:0:44:0%:81:1E0:39:44:15:29:46 0/0:0:0:0:0:36:0%:66:1E0:39:36:9:27:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:35 0/0:0:0:0:0:44:0%:81:1E0:39:44:15:29:44 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:10:26:37 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:20 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:40 0/0:0:0:0:0:51:0%:97:1E0:40:51:21:30:51 0/0:0:0:0:0:33:0%:63:1E0:39:33:10:23:33 MTB_anc 1644335 . C CTTCGCTCTGCATCGTCGTCGGCGCGGTTCACG . PASS AC=1;AF=3.333e-03;AN=300;ANN=CTTCGCTCTGCATCGTCGTCGGCGCGGTTCACG|intergenic_region|MODIFIER|Rv1458c_Rv1458c-Rv1459c_Rv1459c|gene1492-gene1493|intergenic_region|gene1492-gene1493|||n.1644335_1644336insTTCGCTCTGCATCGTCGTCGGCGCGGTTCACG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:38:47:22:25:47 0/0:0:0:0:0:22:0%:40:1E0:50:22:12:10:27 0/0:0:0:0:0:43:0%:82:1E0:43:43:28:15:44 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:34 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:41 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:22 0/0:0:0:0:0:44:0%:81:1E0:46:44:19:25:44 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:34:0%:62:1E0:50:34:19:15:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:38 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:37 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:19 0/0:0:0:0:0:31:0%:59:1E0:43:31:9:22:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:43 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:45 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:18 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:10:28:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:32 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:41:0%:78:1E0:43:41:13:28:42 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:40 0/0:0:0:0:0:51:0%:97:1E0:43:51:20:31:53 0/1:36:10:3:7:59:16.95%:32:6.18E-4:42:44:18:26:61 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:34 0/0:0:0:0:0:47:0%:89:1E0:43:47:17:30:47 0/0:0:0:0:0:35:0%:67:1E0:39:35:10:25:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:42:0%:77:1E0:42:42:16:26:42 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:50:0%:92:1E0:41:50:20:30:51 0/0:0:0:0:0:33:0%:63:1E0:44:33:10:23:33 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:43 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:18 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:58 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:43 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:30 0/0:0:0:0:0:45:0%:85:1E0:47:45:18:27:45 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:40 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:45 0/0:0:0:0:0:28:0%:51:1E0:47:28:6:22:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:61:0%:99:1E0:43:61:23:38:62 0/0:0:0:0:0:33:0%:63:1E0:42:33:11:22:33 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:20 0/0:0:0:0:0:51:0%:97:1E0:42:51:19:32:51 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:21 0/0:0:0:0:0:53:0%:99:1E0:46:53:21:32:55 0/0:0:0:0:0:49:0%:93:1E0:39:49:27:22:50 0/0:38:1:0:1:35:2.86%:55:5E-1:43:34:13:21:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:11:26:37 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:44 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:28 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:33 0/0:0:0:0:0:47:0%:89:1E0:46:47:28:19:47 0/0:0:0:0:0:14:0%:25:1E0:43:14:3:11:15 0/0:0:0:0:0:53:0%:99:1E0:40:53:16:37:53 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:18 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:11:24:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:34 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:26 0/0:0:0:0:0:25:0%:48:1E0:40:25:7:18:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:26 0/0:0:0:0:0:39:0%:74:1E0:39:39:13:26:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:38 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:23 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:50:0%:92:1E0:39:50:21:29:52 0/0:0:0:0:0:39:0%:74:1E0:39:39:12:27:40 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:46 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:33 0/0:0:0:0:0:58:0%:99:1E0:41:58:28:30:59 0/0:0:0:0:0:67:0%:99:1E0:41:67:25:42:69 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:49:0%:93:1E0:38:49:26:23:50 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:40 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:52:0%:96:1E0:37:52:15:37:52 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:45 0/0:0:0:0:0:46:0%:85:1E0:38:46:19:27:47 0/0:0:0:0:0:36:0%:66:1E0:38:36:14:22:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:13:24:40 0/0:0:0:0:0:50:0%:92:1E0:38:50:19:31:50 0/0:0:0:0:0:46:0%:85:1E0:38:46:16:30:46 0/0:0:0:0:0:37:0%:70:1E0:40:37:10:27:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:36 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:44 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:10:26:37 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:11:24:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:20 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:0:0:0:0:38:0%:70:1E0:38:38:16:22:40 0/0:0:0:0:0:51:0%:97:1E0:39:51:21:30:51 0/0:0:0:0:0:32:0%:59:1E0:39:32:10:22:32 MTB_anc 1644362 . C T . PASS AC=42;AF=0.140;AN=300;ANN=T|intergenic_region|MODIFIER|Rv1458c_Rv1458c-Rv1459c_Rv1459c|gene1492-gene1493|intergenic_region|gene1492-gene1493|||n.1644362C>T||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:9:1:8:47:19.15%:28:1.2811E-3:41:38:21:17:48 0/1:38:7:4:3:25:28%:23:4.8126E-3:49:18:10:8:27 0/0:60:1:0:1:37:2.7%:59:5E-1:44:36:20:16:38 0/0:38:2:0:2:30:6.67%:37:2.4576E-1:46:28:13:15:30 0/1:38:10:3:7:36:27.78%:33:4.7404E-4:41:26:11:15:39 0/0:0:0:0:0:17:0%:33:1E0:42:17:6:11:20 0/1:41:9:5:4:42:21.43%:29:1.2112E-3:48:33:13:20:42 0/0:39:6:1:5:33:18.18%:23:1.219E-2:44:27:17:10:33 0/0:32:1:0:1:22:4.55%:31:5E-1:46:21:6:15:22 0/0:0:0:0:0:33:0%:63:1E0:54:33:19:14:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:30:1:1:0:37:2.7%:59:5E-1:45:36:15:21:39 0/0:43:4:0:4:20:20%:13:5.3015E-2:50:16:9:7:20 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:35:2:2:0:18:11.11%:18:2.4286E-1:45:16:4:12:18 0/0:36:4:1:3:30:13.33%:26:5.62E-2:42:26:6:20:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/1:37:9:4:5:40:22.5%:29:1.1791E-3:42:31:18:13:43 0/0:38:1:0:1:38:2.63%:58:5E-1:43:37:18:19:39 0/0:38:1:0:1:24:4.17%:34:5E-1:50:23:12:11:24 0/0:24:1:1:0:31:3.23%:48:5E-1:49:30:15:15:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:60:1:1:0:20:5%:27:5E-1:47:19:9:10:20 0/0:60:1:1:0:21:4.76%:31:5E-1:48:20:10:10:23 0/0:42:4:2:2:30:13.33%:26:5.62E-2:48:26:14:12:30 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:39 0/1:36:8:0:8:40:20%:25:2.653E-3:40:32:11:21:42 0/0:36:5:1:4:30:16.67%:21:2.6093E-2:46:25:11:14:31 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:19 0/1:38:8:2:6:37:21.62%:25:2.5617E-3:45:29:14:15:38 0/0:41:4:0:4:24:16.67%:18:5.461E-2:41:20:8:12:24 0/1:41:13:6:7:40:32.5%:44:3.8184E-5:43:27:6:21:42 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:29 0/1:37:8:1:7:44:18.18%:25:2.7573E-3:42:36:16:20:44 0/0:0:0:0:0:40:0%:74:1E0:46:40:15:25:42 0/1:37:8:2:6:50:16%:25:2.8851E-3:45:42:18:24:52 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:41 0/0:36:2:0:2:30:6.67%:37:2.4576E-1:41:28:11:17:31 0/0:0:0:0:0:48:0%:89:1E0:44:48:20:28:48 0/1:36:9:2:7:34:26.47%:29:1.0644E-3:40:25:8:17:35 0/0:34:5:4:1:26:19.23%:17:2.5076E-2:39:20:8:12:26 0/0:36:6:1:5:40:15%:30:1.2773E-2:43:34:13:21:41 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/1:35:10:2:8:51:19.61%:32:5.9342E-4:41:40:18:22:53 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/1:36:8:2:6:44:18.18%:25:2.7573E-3:42:36:17:19:44 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:16 0/1:37:14:5:9:54:25.93%:46:2.3225E-5:41:40:21:19:61 0/0:35:3:1:2:30:10%:31:1.1864E-1:48:27:12:15:31 0/0:38:1:0:1:30:3.33%:44:5E-1:42:29:14:15:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:31:2:2:0:46:4.35%:63:2.4725E-1:42:44:22:22:46 0/0:39:5:2:3:37:13.51%:32:2.706E-2:42:32:13:19:38 0/1:35:8:3:5:27:29.63%:26:2.1337E-3:39:19:8:11:28 0/0:33:1:0:1:46:2.17%:73:5E-1:47:45:20:25:46 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:38:2:0:2:25:8%:31:2.449E-1:47:23:10:13:27 0/1:37:8:3:5:37:21.62%:25:2.5617E-3:42:29:13:16:38 0/1:39:8:2:6:42:19.05%:25:2.7074E-3:43:34:13:21:43 0/0:0:0:0:0:26:0%:47:1E0:47:26:7:19:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:32:2:0:2:54:3.7%:77:2.4766E-1:46:52:19:33:55 0/1:38:11:4:7:33:33.33%:37:1.8019E-4:45:22:8:14:33 0/0:60:1:1:0:34:2.94%:51:5E-1:48:33:15:18:35 0/0:38:6:3:3:22:27.27%:9:1.057E-2:49:16:7:9:22 0/0:60:2:0:2:16:12.5%:16:2.4138E-1:44:13:6:7:16 0/1:42:11:2:9:46:23.91%:36:2.4819E-4:45:35:14:21:48 0/0:37:6:1:5:25:24%:14:1.1145E-2:44:19:9:10:26 0/0:38:3:0:3:22:13.64%:19:1.1628E-1:48:19:13:6:24 0/1:38:10:2:8:51:19.61%:32:5.9987E-4:48:41:16:25:53 0/0:32:1:1:0:49:2.04%:80:5E-1:40:48:24:24:50 0/1:38:8:3:5:38:21.05%:25:2.5935E-3:45:30:11:19:39 0/0:27:1:1:0:34:2.94%:51:5E-1:42:33:18:15:34 0/0:36:6:0:6:40:15%:30:1.2773E-2:49:34:12:22:42 0/0:33:1:0:1:43:2.33%:70:5E-1:42:42:16:26:44 0/0:29:2:2:0:24:8.33%:27:2.4468E-1:45:22:12:10:25 0/0:34:1:0:1:28:3.57%:41:5E-1:41:27:9:18:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:36:3:1:2:36:8.33%:40:1.1972E-1:41:33:16:17:37 0/0:35:6:1:5:29:20.69%:18:1.1736E-2:49:23:11:12:30 0/0:32:1:1:0:26:3.85%:38:5E-1:42:25:11:14:27 0/0:38:1:0:1:30:3.33%:44:5E-1:41:29:14:15:31 0/0:43:2:1:1:32:6.25%:40:2.4603E-1:46:30:12:18:33 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:60:1:0:1:29:3.45%:45:5E-1:44:28:14:14:29 0/1:41:8:2:6:34:23.53%:26:2.4173E-3:48:25:8:17:34 0/1:37:7:2:5:47:14.89%:22:6.1442E-3:49:40:25:15:47 0/0:34:1:1:0:17:5.88%:24:5E-1:44:16:3:13:17 0/1:36:13:3:10:53:24.53%:42:5.2873E-5:42:40:16:24:53 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:17 0/0:0:0:0:0:40:0%:74:1E0:47:40:17:23:41 0/1:38:7:2:5:28:25%:22:5.1054E-3:43:21:11:10:30 0/1:40:9:0:9:35:25.71%:29:1.0857E-3:38:26:12:14:37 0/0:38:1:0:1:30:3.33%:44:5E-1:41:29:7:22:30 0/0:32:1:0:1:28:3.57%:41:5E-1:42:27:12:15:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:32 0/1:36:7:1:6:42:16.67%:22:5.9563E-3:40:35:20:15:44 0/0:35:4:1:3:26:15.38%:20:5.5222E-2:43:22:13:9:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:22 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:8:21:29 0/0:37:6:0:6:39:15.38%:31:1.2702E-2:41:33:13:20:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:25 0/1:39:11:3:8:33:33.33%:37:1.8019E-4:47:22:9:13:33 0/0:40:6:2:4:22:27.27%:9:1.057E-2:40:16:6:10:22 0/1:34:9:2:7:26:34.62%:30:8.4928E-4:39:17:7:10:27 0/1:38:12:5:7:39:30.77%:40:9.0046E-5:47:27:14:13:40 0/1:35:9:2:7:45:20%:29:1.2547E-3:40:36:17:19:47 0/1:37:9:2:7:45:20%:29:1.2547E-3:40:36:12:24:47 0/0:36:3:0:3:31:9.68%:34:1.1885E-1:39:28:14:14:35 0/1:39:11:2:9:43:25.58%:36:2.3512E-4:45:32:17:15:45 0/0:33:4:1:3:25:16%:21:5.4928E-2:42:21:11:10:27 0/0:34:5:1:4:59:8.47%:65:2.8614E-2:42:54:28:26:59 0/1:36:12:3:9:66:18.18%:38:1.4106E-4:43:54:23:31:69 0/0:37:3:0:3:27:11.11%:25:1.1765E-1:40:23:14:9:28 0/0:29:2:1:1:28:7.14%:34:2.4545E-1:45:26:13:13:30 0/0:0:0:0:0:46:0%:85:1E0:38:46:25:21:50 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:36 0/0:37:2:1:1:31:6.45%:40:2.459E-1:44:29:18:11:31 0/1:37:13:3:10:43:30.23%:43:4.2025E-5:38:30:11:19:49 0/1:36:9:0:9:44:20.45%:29:1.2408E-3:43:35:20:15:45 0/1:34:10:2:8:43:23.26%:32:5.4148E-4:39:33:15:18:46 0/0:33:1:0:1:34:2.94%:51:5E-1:41:33:13:20:35 0/0:38:1:0:1:38:2.63%:58:5E-1:41:37:16:21:41 0/0:37:1:0:1:45:2.22%:73:5E-1:38:44:18:26:48 0/0:36:6:1:5:43:13.95%:36:1.2967E-2:40:37:15:22:45 0/0:33:2:0:2:30:6.67%:37:2.4576E-1:41:28:9:19:31 0/0:38:1:0:1:20:5%:27:5E-1:39:19:7:12:23 0/1:39:8:2:6:37:21.62%:25:2.5617E-3:43:29:11:18:39 0/0:30:2:1:1:43:4.65%:60:2.4706E-1:40:41:17:24:43 0/0:30:2:2:0:25:8%:31:2.449E-1:42:23:9:14:25 0/0:38:1:0:1:33:3.03%:52:5E-1:46:32:21:11:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/1:39:10:2:8:33:30.3%:33:4.3872E-4:41:23:7:16:34 0/0:32:3:0:3:24:12.5%:22:1.1702E-1:40:21:7:14:26 0/1:35:9:1:8:38:23.68%:29:1.1442E-3:42:29:11:18:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:35:5:1:4:21:23.81%:12:2.3921E-2:38:16:6:10:23 0/0:36:6:1:5:22:27.27%:9:1.057E-2:43:16:7:9:23 0/0:38:2:0:2:33:6.06%:44:2.4615E-1:42:31:15:16:33 0/1:36:8:4:4:34:23.53%:26:2.4562E-3:42:26:11:15:36 0/1:37:15:2:13:46:32.61%:51:7.8109E-6:40:31:17:14:48 0/0:36:3:0:3:34:8.82%:37:1.194E-1:41:31:12:19:34 MTB_anc 1647140 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv1461_Rv1461|gene1495|transcript|Transcript_gene1495|Coding|1/1|c.152C>T|p.Ser51Phe|152/2541|152/2541|51/846||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1647140C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1647140C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:43:52:31:21:52 0/0:0:0:0:0:15:0%:29:1E0:49:15:4:11:15 0/0:0:0:0:0:63:0%:99:1E0:48:63:31:32:63 0/0:0:0:0:0:31:0%:59:1E0:45:31:22:9:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:42 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:37 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:12:0%:21:1E0:44:12:8:4:12 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:41 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:12:22:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:39 0/0:0:0:0:0:48:0%:89:1E0:40:48:27:21:48 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:38 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:45 0/0:60:1:1:0:39:2.56%:62:5E-1:44:38:14:24:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:28 0/0:0:0:0:0:36:0%:66:1E0:49:36:20:16:36 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:57:0%:99:1E0:44:57:34:23:57 0/0:0:0:0:0:41:0%:78:1E0:48:41:25:16:41 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:46 0/0:0:0:0:0:48:0%:89:1E0:45:48:29:19:49 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:29 0/0:0:0:0:0:56:0%:99:1E0:41:56:31:25:56 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:31:20:52 0/0:0:0:0:0:59:0%:99:1E0:42:59:36:23:59 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:21:0%:40:1E0:50:21:13:8:22 1/1:39:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:66:0%:99:1E0:42:66:37:29:66 0/0:0:0:0:0:54:0%:99:1E0:43:54:25:29:54 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:29 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:47 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:47 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:38 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:24 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:49 0/0:0:0:0:0:24:0%:44:1E0:51:24:15:9:26 0/0:0:0:0:0:41:0%:78:1E0:49:41:18:23:43 0/0:0:0:0:0:56:0%:99:1E0:42:56:32:24:56 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 0/0:33:1:0:1:53:1.89%:88:5E-1:42:52:30:22:54 0/0:0:0:0:0:15:0%:29:1E0:46:15:8:7:15 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:0:0:0:0:48:0%:89:1E0:48:48:25:23:50 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:22 0/0:0:0:0:0:32:0%:59:1E0:50:32:11:21:32 0/0:0:0:0:0:56:0%:99:1E0:38:56:25:31:57 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:34 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:46 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:58:0%:99:1E0:45:58:28:30:62 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:46 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:45 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:37 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:29:0%:55:1E0:50:29:21:8:29 0/0:0:0:0:0:47:0%:89:1E0:41:47:29:18:48 0/0:0:0:0:0:34:0%:62:1E0:46:34:23:11:34 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:49 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:28 0/0:0:0:0:0:37:0%:70:1E0:44:37:25:12:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:44 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:40 0/0:0:0:0:0:16:0%:29:1E0:42:16:7:9:18 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:47 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:37 0/0:0:0:0:0:63:0%:99:1E0:42:63:33:30:64 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:31 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:49 0/0:0:0:0:0:58:0%:99:1E0:42:58:26:32:59 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:31 0/0:0:0:0:0:50:0%:92:1E0:40:50:28:22:53 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:52 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:44 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:47 0/0:0:0:0:0:43:0%:82:1E0:40:43:27:16:44 0/0:0:0:0:0:40:0%:74:1E0:40:40:28:12:40 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:29 0/0:0:0:0:0:34:0%:62:1E0:38:34:17:17:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:46 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:39 0/0:0:0:0:0:59:0%:99:1E0:41:59:35:24:60 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:45 0/0:0:0:0:0:41:0%:78:1E0:42:41:27:14:44 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:34:0%:62:1E0:45:34:22:12:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:49:0%:93:1E0:43:49:23:26:50 0/0:0:0:0:0:54:0%:99:1E0:40:54:33:21:55 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 MTB_anc 1655829 . G GC . PASS AC=16;AF=0.054;AN=294;ANN=GC|frameshift_variant|HIGH|PE_PGRS29_Rv1468c|gene1502|transcript|Transcript_gene1502|Coding|1/1|c.892dupG|p.Ala298fs|892/1113|892/1113|298/370||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1655829_1655830insC||||||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1655829_1655830insC||||||;LOF=(PE_PGRS29_Rv1468c|gene1502|1|1.00);set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:37:34:17:17:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:25:0%:48:1E0:36:25:15:10:27 0/0:0:0:0:0:13:0%:25:1E0:41:13:7:6:13 0/0:0:0:0:0:32:0%:59:1E0:36:32:17:15:33 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:10 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:23 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:16 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:20 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:29 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:21 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:24 0/0:0:0:0:0:9:0%:18:1E0:41:9:5:4:11 0/0:0:0:0:0:30:0%:55:1E0:37:30:16:14:30 0/1:33:13:5:8:15:81.25%:57:1.6121E-6:34:3:1:2:16 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:11:0%:22:1E0:40:11:3:8:11 0/0:37:1:1:0:12:8.33%:14:5E-1:36:11:4:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:42:8:6:2:11:72.73%:32:5.16E-4:35:3:2:1:11 0/1:35:12:4:8:17:66.67%:48:1.4831E-5:34:6:2:4:18 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/0:0:0:0:0:14:0%:25:1E0:34:14:6:8:14 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:23 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:21 0/0:0:0:0:0:16:0%:29:1E0:41:16:10:6:17 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:17 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:30 0/0:0:0:0:0:28:0%:51:1E0:37:28:15:13:29 1/1:39:13:8:5:14:92.86%:64:3.7391E-7:34:1:0:1:14 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:23 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 1/1:39:18:11:7:19:94.74%:92:5.6585E-10:39:1:1:0:19 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:17 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:25 0/0:0:0:0:0:49:0%:93:1E0:38:49:32:17:51 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:31 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:36 0/1:35:13:9:4:14:86.67%:60:8.7675E-7:31:2:1:1:15 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:13 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:18 0/0:37:1:1:0:20:5%:27:5E-1:38:19:14:5:21 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:22 0/0:37:1:1:0:23:4.35%:34:5E-1:35:22:15:7:23 1/1:38:27:17:10:26:96.43%:99:3.7915E-15:33:1:0:1:28 0/0:0:0:0:0:22:0%:40:1E0:38:22:16:6:25 0/0:0:0:0:0:32:0%:59:1E0:37:32:18:14:33 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:18 0/0:0:0:0:0:24:0%:44:1E0:37:24:16:8:26 0/0:0:0:0:0:22:0%:40:1E0:36:22:14:8:24 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:19 0/0:0:0:0:0:11:0%:22:1E0:36:11:8:3:12 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:11:0%:22:1E0:34:11:8:3:11 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:18 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:22 0/0:0:0:0:0:22:0%:40:1E0:38:22:14:8:22 0/0:0:0:0:0:18:0%:32:1E0:37:18:12:6:18 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:25 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:18 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:22 0/0:37:1:1:0:45:2.22%:73:5E-1:37:44:23:21:48 0/0:0:0:0:0:21:0%:40:1E0:34:21:9:12:21 0/0:26:1:0:1:38:2.63%:58:5E-1:40:37:21:16:40 0/0:0:0:0:0:15:0%:29:1E0:37:15:9:6:16 0/0:0:0:0:0:8:0%:14:1E0:40:8:6:2:9 0/0:0:0:0:0:27:0%:52:1E0:40:27:8:19:30 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:13:6:19 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:18 0/0:37:1:1:0:24:4.17%:34:5E-1:38:23:14:9:26 0/0:0:0:0:0:24:0%:44:1E0:39:24:17:7:27 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:0:0:0:0:9:0%:18:1E0:35:9:3:6:10 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:20 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:36 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:27 0/0:0:0:0:0:18:0%:32:1E0:40:18:12:6:18 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:19 1/1:37:19:7:12:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:39:21:13:8:20:95.45%:99:1.0931E-11:37:1:1:0:22 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:13 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:28 0/0:0:0:0:0:14:0%:25:1E0:39:14:6:8:14 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:37:1:1:0:27:3.7%:41:5E-1:37:26:10:16:27 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:22 0/0:39:1:0:1:27:3.7%:41:5E-1:39:26:9:17:27 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:15 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:16 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:20 0/0:0:0:0:0:21:0%:40:1E0:37:21:15:6:21 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:32 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 0/0:0:0:0:0:17:0%:33:1E0:35:17:13:4:18 0/0:0:0:0:0:15:0%:29:1E0:33:15:7:8:15 0/0:0:0:0:0:24:0%:44:1E0:35:24:11:13:25 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:17 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:24 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:20:11:34 0/0:0:0:0:0:26:0%:47:1E0:36:26:15:11:26 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 0/0:0:0:0:0:15:0%:29:1E0:38:15:12:3:17 0/0:0:0:0:0:21:0%:40:1E0:40:21:16:5:22 0/0:38:1:0:1:15:6.67%:21:5E-1:38:14:8:6:15 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:20 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:14 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:31 0/0:0:0:0:0:13:0%:25:1E0:35:13:7:6:14 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:28 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:18 0/0:0:0:0:0:13:0%:25:1E0:33:13:7:6:13 0/0:0:0:0:0:20:0%:36:1E0:35:20:7:13:21 0/0:38:5:5:0:10:45.45%:3:1.7544E-2:36:6:4:2:12 0/0:0:0:0:0:13:0%:25:1E0:36:13:10:3:13 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:15 0/0:0:0:0:0:25:0%:48:1E0:36:25:11:14:25 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:15 0/0:0:0:0:0:10:0%:17:1E0:38:10:4:6:11 0/0:0:0:0:0:12:0%:21:1E0:38:12:9:3:12 0/0:0:0:0:0:15:0%:29:1E0:34:15:9:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:12 0/0:0:0:0:0:11:0%:22:1E0:34:11:7:4:12 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:18 0/0:0:0:0:0:33:0%:63:1E0:39:33:22:11:34 0/0:0:0:0:0:28:0%:51:1E0:36:28:15:13:28 0/0:60:1:1:0:18:5.56%:24:5E-1:37:17:10:7:18 0/0:37:1:0:1:23:4.35%:34:5E-1:35:22:13:9:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:22 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:17 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:36:26:14:12:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:21 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:14 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:29 0/0:0:0:0:0:28:0%:51:1E0:37:28:20:8:28 0/0:0:0:0:0:32:0%:59:1E0:37:32:19:13:33 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:19 MTB_anc 1659351 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|trxA_Rv1470|gene1504|transcript|Transcript_gene1504|Coding|1/1|c.372C>T|p.Ser124Ser|372/375|372/375|124/124||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1659351C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1659351C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:33 0/0:0:0:0:0:23:0%:44:1E0:50:23:9:14:23 0/0:0:0:0:0:64:0%:99:1E0:47:64:30:34:65 0/0:0:0:0:0:41:0%:78:1E0:48:41:24:17:42 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:44:0%:81:1E0:51:44:28:16:44 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:36:0%:66:1E0:50:36:21:15:37 0/0:0:0:0:0:45:0%:85:1E0:47:45:27:18:45 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:39 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:45 0/0:0:0:0:0:22:0%:40:1E0:52:22:9:13:22 0/0:0:0:0:0:49:0%:93:1E0:43:49:19:30:50 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:20:9:29 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:23 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:18 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:51:0%:97:1E0:45:51:29:22:51 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:22:0%:40:1E0:50:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:19 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:31 0/0:0:0:0:0:35:0%:67:1E0:50:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:47:32:21:11:32 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:40 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:49:0%:93:1E0:44:49:24:25:49 0/0:0:0:0:0:47:0%:89:1E0:47:47:25:22:47 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:60:1:0:1:29:3.45%:45:5E-1:46:28:18:10:29 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:32 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:46:0%:85:1E0:49:46:18:28:47 0/0:0:0:0:0:22:0%:40:1E0:52:22:12:10:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:11:28:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:21 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:31:0%:59:1E0:47:31:21:10:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:35 0/0:0:0:0:0:28:0%:51:1E0:50:28:18:10:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:6:20:26 0/0:0:0:0:0:47:0%:89:1E0:46:47:24:23:48 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:19:0%:37:1E0:48:19:14:5:19 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:19 0/0:0:0:0:0:48:0%:89:1E0:48:48:23:25:48 0/0:0:0:0:0:33:0%:63:1E0:52:33:17:16:33 0/0:0:0:0:0:21:0%:40:1E0:52:21:10:11:21 0/0:0:0:0:0:54:0%:99:1E0:49:54:28:26:54 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:60:1:0:1:34:2.94%:51:5E-1:53:33:17:16:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:32 0/0:0:0:0:0:16:0%:29:1E0:46:16:9:7:16 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:42 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:38:0%:70:1E0:49:38:23:15:38 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:38 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:52:0%:96:1E0:45:52:24:28:52 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:27 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:17 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:38 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:47 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:39:0%:74:1E0:47:39:16:23:39 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:52:0%:96:1E0:43:52:26:26:53 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:64:0%:99:1E0:43:64:32:32:65 0/0:0:0:0:0:63:0%:99:1E0:44:63:34:29:64 0/0:0:0:0:0:41:0%:78:1E0:45:41:12:29:41 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:54:0%:99:1E0:41:54:23:31:54 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:49 0/0:0:0:0:0:56:0%:99:1E0:40:56:27:29:56 0/0:0:0:0:0:49:0%:93:1E0:38:49:24:25:51 0/0:0:0:0:0:70:0%:99:1E0:42:70:38:32:70 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:38 0/0:0:0:0:0:57:0%:99:1E0:41:57:33:24:60 0/0:0:0:0:0:43:0%:82:1E0:45:43:16:27:43 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:45 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:39:1:0:1:39:2.56%:62:5E-1:42:38:17:21:40 0/0:0:0:0:0:64:0%:99:1E0:40:64:37:27:66 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:48 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:43 0/0:0:0:0:0:37:0%:70:1E0:44:37:28:9:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:31 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:34 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:45 0/0:0:0:0:0:56:0%:99:1E0:43:56:30:26:56 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 MTB_anc 1659994 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|echA12_Rv1472|gene1506|transcript|Transcript_gene1506|Coding|1/1|c.232T>C|p.Ser78Pro|232/858|232/858|78/285||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1659994T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1659994T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:31:17:48:100%:99:1.554E-28:0:0:0:0:49 1/1:51:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:20:14:6:21:95.24%:99:7.2544E-12:0:0:0:0:22 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:51:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:39:23:16:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:23:14:9:24:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:18:12:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:43:63:42:21:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:46:34:12:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:27:14:13:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:39:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 MTB_anc 1669358 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|moxR1_Rv1479|gene1514|transcript|Transcript_gene1514|Coding|1/1|c.76C>A|p.His26Asn|76/1134|76/1134|26/377||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1669358C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1669358C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:15:4:11:16:93.75%:75:2.8282E-8:34:1:1:0:17 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:33:12:21:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:42:22:20:43:97.67%:99:6.6289E-24:33:1:1:0:45 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:47:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:47:29:16:13:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:48:18:30:48:100%:99:1.554E-28:0:0:0:0:51 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:56:18:38:57:98.25%:99:3.7452E-32:36:1:1:0:58 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:26 MTB_anc 1671090 . C T . PASS AC=18;AF=0.060;AN=300;ANN=T|synonymous_variant|LOW|Rv1480_Rv1480|gene1515|transcript|Transcript_gene1515|Coding|1/1|c.678C>T|p.Ala226Ala|678/954|678/954|226/317||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1671090C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1671090C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:48 0/0:0:0:0:0:13:0%:25:1E0:44:13:8:5:13 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:23 0/0:0:0:0:0:44:0%:81:1E0:46:44:18:26:44 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:38:0%:70:1E0:44:38:13:25:39 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:15 0/0:0:0:0:0:50:0%:92:1E0:42:50:23:27:51 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:33 0/0:0:0:0:0:41:0%:78:1E0:40:41:10:31:41 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:8:16:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:17:0%:33:1E0:44:17:5:12:17 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:36 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:43 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:18 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:27 1/1:45:20:8:12:21:95.24%:99:4.0873E-11:37:1:0:1:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:8:26:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:8:30:38 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:7:18:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:8:21:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:36 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:9:29:39 0/0:0:0:0:0:33:0%:63:1E0:39:33:8:25:33 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:10:21:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 1/1:41:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:52:0%:96:1E0:40:52:20:32:53 0/0:0:0:0:0:48:0%:89:1E0:40:47:15:32:49 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:20:0%:36:1E0:46:20:7:13:20 0/0:0:0:0:0:58:0%:99:1E0:40:58:26:32:60 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:43 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:29 0/0:0:0:0:0:48:0%:89:1E0:43:48:22:26:49 0/0:0:0:0:0:48:0%:89:1E0:41:48:18:30:50 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:27 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:42 0/0:0:0:0:0:26:0%:48:1E0:43:25:10:15:26 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:22 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:32 0/0:0:0:0:0:55:0%:99:1E0:40:55:21:34:56 0/0:0:0:0:0:28:0%:51:1E0:42:28:7:21:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:49 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:14:25:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:30 0/0:60:1:0:1:25:4%:38:5E-1:41:24:8:16:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:9:27:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:52:0%:96:1E0:41:52:24:28:53 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:11:26:37 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:42:39:13:26:41 0/0:0:0:0:0:26:0%:47:1E0:40:26:8:18:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:11:25:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:42:0%:77:1E0:40:42:13:29:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:28:0%:51:1E0:49:28:11:17:28 0/0:0:0:0:0:43:0%:82:1E0:40:43:12:31:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:44:0%:81:1E0:42:44:14:30:45 0/0:0:0:0:0:22:0%:40:1E0:42:22:4:18:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:4:24:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:13:24:37 0/0:37:1:0:1:19:5.26%:28:5E-1:40:18:7:11:19 0/0:39:1:1:0:30:3.33%:44:5E-1:42:29:10:19:32 0/0:0:0:0:0:20:0%:36:1E0:42:20:7:13:20 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:28 0/0:0:0:0:0:16:0%:29:1E0:41:16:4:12:19 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:16 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:24:0%:44:1E0:44:24:6:18:24 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:38 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:22:0%:40:1E0:39:22:8:14:24 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:36 0/0:0:0:0:0:49:0%:93:1E0:38:49:13:36:50 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:26 0/0:38:1:1:0:28:3.57%:41:5E-1:40:27:8:19:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:49 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:45 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:22 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:43 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:10:26:36 0/0:0:0:0:0:46:0%:85:1E0:43:46:15:31:46 0/0:0:0:0:0:22:0%:40:1E0:38:22:6:16:22 0/0:0:0:0:0:45:0%:85:1E0:38:45:19:26:45 0/0:0:0:0:0:41:0%:78:1E0:39:41:14:27:41 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:10:28:38 0/0:0:0:0:0:42:0%:78:1E0:39:41:16:25:43 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:34 0/0:0:0:0:0:40:0%:74:1E0:40:40:13:27:40 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:24 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:39:1:0:1:58:1.72%:94:5E-1:43:57:15:42:58 0/0:0:0:0:0:33:0%:63:1E0:40:33:7:26:33 MTB_anc 1676161 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv1486c_Rv1486c|gene1521|transcript|Transcript_gene1521|Coding|1/1|c.723C>T|p.Ala241Ala|723/867|723/867|241/288||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1676161G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1676161G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:29:25:4:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:48:29:19:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:60:27:33:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:65:28:37:66:98.48%:99:1.7754E-37:29:1:0:1:66 1/1:40:39:14:25:40:97.5%:99:3.8137E-22:33:1:1:0:44 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 1677820 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1488_Rv1488|gene1523|transcript|Transcript_gene1523|Coding|1/1|c.424A>G|p.Asn142Asp|424/1146|424/1146|142/381||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1677820A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1677820A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:26:14:12:27:96.3%:99:1.4382E-14:39:1:0:1:28 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:33:21:12:34:97.06%:99:1.2301E-18:60:1:1:0:35 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:61:24:37:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:52:36:16:52:100%:99:6.3169E-31:0:0:0:0:57 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:35:14:21:36:97.22%:99:8.3613E-20:38:1:0:1:36 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:31:19:12:32:96.88%:99:1.8007E-17:37:1:0:1:33 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 1688300 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|lipL_Rv1497|gene1533|transcript|Transcript_gene1533|Coding|1/1|c.360C>T|p.Phe120Phe|360/1290|360/1290|120/429||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1688300C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1688300C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:54:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:35:17:18:36:97.22%:99:8.3613E-20:37:1:0:1:36 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:50:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:37:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:25:14:11:26:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:55:37:18:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:39:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:39:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 1688628 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|lipL_Rv1497|gene1533|transcript|Transcript_gene1533|Coding|1/1|c.688A>G|p.Ile230Val|688/1290|688/1290|230/429||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1688628A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1688628A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:42:50:22:28:50 0/0:0:0:0:0:25:0%:48:1E0:49:25:9:16:25 0/0:0:0:0:0:48:0%:89:1E0:46:48:16:32:48 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:20 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:43:0%:82:1E0:49:43:19:24:43 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:33 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:43 0/0:0:0:0:0:14:0%:25:1E0:46:14:7:7:14 0/0:0:0:0:0:55:0%:99:1E0:46:55:25:30:56 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:24 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:49 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:58:0%:99:1E0:41:58:22:36:58 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:41 0/0:0:0:0:0:14:0%:25:1E0:51:14:3:11:15 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:34 0/0:0:0:0:0:50:0%:92:1E0:49:50:24:26:50 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:22:0%:40:1E0:47:22:7:15:22 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:39 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:45 0/0:0:0:0:0:61:0%:99:1E0:43:61:25:36:62 0/0:0:0:0:0:52:0%:96:1E0:46:52:27:25:53 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:40 0/0:0:0:0:0:48:0%:89:1E0:43:48:18:30:49 0/0:0:0:0:0:45:0%:85:1E0:45:45:17:28:45 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:28:18:46 0/0:0:0:0:0:52:0%:96:1E0:45:52:28:24:52 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:42 0/0:0:0:0:0:52:0%:96:1E0:44:52:24:28:54 0/0:0:0:0:0:51:0%:97:1E0:46:51:23:28:52 0/0:0:0:0:0:29:0%:55:1E0:51:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 1/1:43:49:18:31:50:98%:99:5.0549E-28:37:1:1:0:51 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:54:0%:99:1E0:44:54:30:24:56 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:31 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:38 0/0:0:0:0:0:52:0%:96:1E0:45:52:28:24:52 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:26 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:40 0/0:39:1:0:1:60:1.67%:98:5E-1:46:59:31:28:60 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:37 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:16:0%:29:1E0:45:16:5:11:16 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:23:0%:44:1E0:50:23:12:11:23 0/0:0:0:0:0:15:0%:29:1E0:47:15:10:5:15 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:0:0:0:0:65:0%:99:1E0:43:65:35:30:65 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:30 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:42 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:62:0%:99:1E0:44:62:31:31:63 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:42 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:35 0/0:0:0:0:0:34:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:16 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:23:0%:44:1E0:48:23:6:17:23 0/0:0:0:0:0:50:0%:92:1E0:40:50:21:29:50 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:34 0/0:0:0:0:0:54:0%:99:1E0:41:54:24:30:54 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:31 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:41 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:29 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:19 0/0:0:0:0:0:34:0%:62:1E0:45:34:11:23:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:12:28:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:47 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:41 0/0:0:0:0:0:44:0%:81:1E0:39:44:17:27:45 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:42 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:36 0/0:0:0:0:0:57:0%:99:1E0:42:57:23:34:58 0/0:0:0:0:0:58:0%:99:1E0:42:58:28:30:59 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:25 0/0:0:0:0:0:54:0%:99:1E0:40:54:27:27:57 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:34 0/0:0:0:0:0:46:0%:85:1E0:41:46:15:31:47 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:45 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:44 0/0:0:0:0:0:30:0%:55:1E0:39:30:9:21:32 0/0:0:0:0:0:49:0%:93:1E0:43:49:15:34:52 0/0:0:0:0:0:42:0%:77:1E0:40:42:15:27:42 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:38 0/0:0:0:0:0:50:0%:92:1E0:39:50:18:32:51 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 0/0:0:0:0:0:51:0%:97:1E0:41:51:18:33:52 0/0:0:0:0:0:61:0%:99:1E0:39:61:26:35:62 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:35 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:50 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:11:22:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:37 0/0:0:0:0:0:53:0%:99:1E0:42:53:18:35:54 0/0:0:0:0:0:61:0%:99:1E0:42:61:34:27:63 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:35 MTB_anc 1693382 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv1502_Rv1502|gene1539|transcript|Transcript_gene1539|Coding|1/1|c.459C>A|p.Ile153Ile|459/900|459/900|153/299||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1693382C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|unknown|||n.1693382C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:30:13:17:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:47:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:51:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:15:22:38:97.37%:99:5.6582E-21:60:1:0:1:38 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:39:22:17:40:97.5%:99:3.8137E-22:39:1:1:0:40 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:11:2:9:12:91.67%:58:1.4176E-6:0:0:0:0:13 1/1:45:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:9:17:27:96.3%:99:1.4382E-14:24:1:1:0:27 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:65:36:29:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:60:25:35:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:61:34:27:61:100%:99:2.609E-36:0:0:0:0:62 1/1:40:63:34:29:63:100%:99:1.657E-37:0:0:0:0:64 1/1:42:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:61:37:24:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:76:41:35:76:100%:99:2.711E-45:0:0:0:0:76 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 MTB_anc 1694547 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1694547C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1694547C>A||||||,A|intragenic_variant|MODIFIER|Rv1503c_Rv1503c|gene1540|gene_variant|gene1540|||n.1694547C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:52:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:65:25:40:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:63:36:27:63:100%:99:1.657E-37:0:0:0:0:66 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:64:42:22:64:100%:99:4.1752E-38:0:0:0:0:67 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:39:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:65:34:31:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:40:74:41:33:74:100%:99:4.2804E-44:0:0:0:0:75 1/1:43:70:34:36:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:42:71:39:32:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:41:68:34:34:68:100%:99:1.6809E-40:0:0:0:0:70 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 1695674 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv1505c_Rv1505c|gene1541|transcript|Transcript_gene1541|Coding|1/1|c.273T>C|p.Tyr91Tyr|273/666|273/666|91/221||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1695674A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1695674A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:63:34:29:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:53:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:71:45:26:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:49:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:53:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:12:14:27:96.3%:99:1.4382E-14:30:1:1:0:27 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:59:36:23:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:67:37:30:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:42:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:55:20:35:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:67:34:33:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:76:36:40:76:100%:99:2.711E-45:0:0:0:0:76 1/1:39:81:39:42:81:100%:99:2.7329E-48:0:0:0:0:82 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:82:36:46:82:100%:99:6.8742E-49:0:0:0:0:83 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:68:37:31:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 1699849 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1508c_Rv1508c|gene1545|transcript|Transcript_gene1545|Coding|1/1|c.46T>C|p.Ser16Pro|46/1800|46/1800|16/599||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1699849A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1699849A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:27:18:9:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:49:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:52:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:31:13:18:32:96.88%:99:1.8007E-17:38:1:1:0:34 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:58:36:22:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:41:23:18:42:97.62%:99:2.5612E-23:60:1:0:1:42 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:54:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:29:17:12:30:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:51:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:60:31:29:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:50 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:75:43:32:75:100%:99:1.0773E-44:0:0:0:0:75 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 1704464 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|epiA_Rv1512|gene1550|transcript|Transcript_gene1550|Coding|1/1|c.372C>A|p.Leu124Leu|372/969|372/969|124/322||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1704464C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1704464C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:52 0/0:0:0:0:0:17:0%:33:1E0:52:17:11:6:17 0/0:0:0:0:0:53:0%:99:1E0:44:53:22:31:53 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:26 0/0:0:0:0:0:29:0%:55:1E0:50:29:16:13:29 0/0:0:0:0:0:23:0%:44:1E0:51:23:14:9:23 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:49 0/0:0:0:0:0:14:0%:25:1E0:48:14:9:5:14 0/0:0:0:0:0:44:0%:81:1E0:45:44:15:29:44 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:21 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:18 0/0:0:0:0:0:25:0%:48:1E0:50:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:38:31:19:12:32 0/0:0:0:0:0:55:0%:99:1E0:46:55:29:26:56 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:42 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:33:0%:63:1E0:52:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:33 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:42 0/0:0:0:0:0:57:0%:99:1E0:46:57:27:30:57 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:51 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:25 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:60:1:0:1:23:4.35%:34:5E-1:43:22:12:10:23 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:18 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:41 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:50:0%:92:1E0:41:50:28:22:50 0/0:0:0:0:0:52:0%:96:1E0:44:52:27:25:53 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:23 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:48 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:43 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:46 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:33 0/0:0:0:0:0:63:0%:99:1E0:46:63:28:35:63 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:18 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:17 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:12:0%:21:1E0:41:12:7:5:12 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:42 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:44 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:21 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:40 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:47 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:16:0%:29:1E0:48:16:6:10:16 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:60:1:1:0:28:3.57%:41:5E-1:47:27:16:11:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:37 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:22 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:35 0/0:0:0:0:0:58:0%:99:1E0:44:58:31:27:59 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:46 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:22 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:21:11:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 0/0:0:0:0:0:44:0%:81:1E0:40:44:17:27:45 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:40 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:69:0%:99:1E0:40:69:35:34:70 0/0:0:0:0:0:53:0%:99:1E0:43:53:25:28:53 0/0:38:1:0:1:32:3.12%:48:5E-1:41:31:16:15:32 1/1:40:29:14:15:30:96.67%:99:2.6212E-16:38:1:0:1:31 0/0:0:0:0:0:48:0%:89:1E0:39:48:27:21:49 0/0:0:0:0:0:39:0%:74:1E0:39:39:17:22:40 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:48 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:45 0/0:0:0:0:0:44:0%:81:1E0:38:44:22:22:44 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:38:42:21:21:43 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:36 0/0:0:0:0:0:47:0%:89:1E0:38:47:21:26:48 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:40 0/0:0:0:0:0:48:0%:89:1E0:39:48:21:27:48 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:44 0/0:0:0:0:0:60:0%:99:1E0:39:60:29:31:61 0/0:0:0:0:0:50:0%:92:1E0:46:50:30:20:53 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:38:1:0:1:41:2.44%:66:5E-1:40:40:21:19:41 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:18:9:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:49:0%:93:1E0:40:49:29:20:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 MTB_anc 1706746 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1515c_Rv1515c|gene1553|transcript|Transcript_gene1553|Coding|1/1|c.781T>G|p.Phe261Val|781/897|781/897|261/298||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1706746A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1706746A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:14:8:23:95.65%:99:4.7526E-13:0:0:0:0:24 1/1:49:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:20:8:12:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:49:15:34:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 MTB_anc 1712689 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|fadD25_Rv1521|gene1559|transcript|Transcript_gene1559|Coding|1/1|c.388G>A|p.Glu130Lys|388/1752|388/1752|130/583||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1712689G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1712689G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:57:0%:99:1E0:43:57:23:34:58 0/0:0:0:0:0:23:0%:44:1E0:49:23:9:14:23 0/0:0:0:0:0:58:0%:99:1E0:44:58:35:23:58 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:23 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:53:0%:99:1E0:45:53:27:26:53 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:31 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:19 0/0:0:0:0:0:60:0%:99:1E0:45:60:30:30:60 0/0:0:0:0:0:38:0%:70:1E0:46:38:24:14:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:24:15:39 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:48:20:15:5:20 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:38 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:44 0/0:0:0:0:0:50:0%:92:1E0:45:50:29:21:50 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:35 0/0:0:0:0:0:51:0%:97:1E0:43:51:33:18:51 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:22 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:33 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:48 0/0:0:0:0:0:37:0%:70:1E0:47:37:25:12:37 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:16 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:21:0%:40:1E0:49:21:14:7:21 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:48 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:42 0/0:0:0:0:0:27:0%:52:1E0:44:27:20:7:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:34 0/0:0:0:0:0:75:0%:99:1E0:46:75:34:41:76 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:16 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:30 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:20 0/0:0:0:0:0:32:0%:59:1E0:50:32:17:15:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:47:0%:89:1E0:48:47:20:27:48 0/0:0:0:0:0:27:0%:52:1E0:47:27:9:18:27 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:55:0%:99:1E0:42:55:33:22:55 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:22 0/0:0:0:0:0:33:0%:63:1E0:48:33:24:9:34 0/0:0:0:0:0:32:0%:59:1E0:49:32:21:11:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:53:27:11:16:27 0/0:0:0:0:0:62:0%:99:1E0:42:62:31:31:63 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:47 0/0:0:0:0:0:25:0%:48:1E0:50:25:14:11:25 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:37:1:1:0:28:3.57%:41:5E-1:49:27:14:13:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:40:0%:74:1E0:49:40:23:17:40 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:39:0%:74:1E0:42:39:25:14:41 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:27 0/0:0:0:0:0:64:0%:99:1E0:41:64:32:32:65 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:49 0/0:0:0:0:0:34:0%:62:1E0:39:34:23:11:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:59:0%:99:1E0:42:59:33:26:59 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:28 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:44 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:44 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:56 0/0:0:0:0:0:58:0%:99:1E0:42:58:24:34:60 0/0:0:0:0:0:43:0%:82:1E0:44:43:27:16:43 0/0:0:0:0:0:46:0%:85:1E0:43:46:30:16:46 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:45 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:39 0/0:39:1:1:0:39:2.56%:62:5E-1:43:38:19:19:39 0/0:0:0:0:0:77:0%:99:1E0:39:77:33:44:78 0/0:0:0:0:0:63:0%:99:1E0:43:63:39:24:63 0/0:37:1:0:1:47:2.13%:77:5E-1:47:46:23:23:47 0/0:37:1:0:1:56:1.79%:91:5E-1:42:55:31:24:57 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:44:0%:81:1E0:45:44:30:14:44 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:60:1:1:0:24:4.17%:34:5E-1:42:23:14:9:24 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:42 0/0:0:0:0:0:46:0%:85:1E0:43:46:29:17:47 0/0:0:0:0:0:66:0%:99:1E0:44:66:32:34:67 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:44 MTB_anc 1715622 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|mmpL12_Rv1522c|gene1560|transcript|Transcript_gene1560|Coding|1/1|c.1991A>C|p.Lys664Thr|1991/3441|1991/3441|664/1146||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1715622T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1715622T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:47 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:51:0%:97:1E0:46:51:24:27:51 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:38 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:43:0%:82:1E0:50:43:17:26:44 0/0:0:0:0:0:36:0%:66:1E0:52:36:18:18:37 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:41 0/0:0:0:0:0:22:0%:40:1E0:54:22:11:11:22 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:49 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:28 0/0:0:0:0:0:26:0%:47:1E0:51:26:11:15:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:34:0%:62:1E0:50:34:16:18:36 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:24 0/0:0:0:0:0:53:0%:99:1E0:46:53:28:25:54 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:25 0/0:0:0:0:0:55:0%:99:1E0:45:55:29:26:56 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:50:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:34:0%:62:1E0:45:34:8:26:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:41:0%:78:1E0:53:41:18:23:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:36 0/0:0:0:0:0:35:0%:67:1E0:47:35:11:24:35 0/0:0:0:0:0:38:0%:70:1E0:47:38:22:16:38 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:50 0/0:0:0:0:0:44:0%:81:1E0:48:44:24:20:44 0/0:0:0:0:0:57:0%:99:1E0:47:57:25:32:59 0/0:0:0:0:0:48:0%:89:1E0:48:48:28:20:49 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:14 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:23 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:44 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:46:0%:85:1E0:43:46:14:32:46 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:17 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:42 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:37 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:53:0%:99:1E0:43:53:25:28:55 0/0:0:0:0:0:39:0%:74:1E0:51:39:19:20:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:48:37:22:15:37 0/0:0:0:0:0:47:0%:89:1E0:46:47:21:26:47 0/0:0:0:0:0:64:0%:99:1E0:47:64:41:23:65 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:32:0%:59:1E0:52:32:12:20:32 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:26 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:15:0%:29:1E0:49:15:10:5:15 0/0:0:0:0:0:40:0%:74:1E0:50:40:19:21:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:28:0%:51:1E0:51:28:12:16:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:46 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 1/1:44:28:16:12:29:96.55%:99:9.9776E-16:39:1:0:1:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:43 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:24:0%:44:1E0:53:24:17:7:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:44 0/0:0:0:0:0:43:0%:82:1E0:44:43:30:13:43 0/0:0:0:0:0:49:0%:93:1E0:43:49:21:28:50 0/0:0:0:0:0:14:0%:25:1E0:41:14:8:6:14 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:31 0/0:0:0:0:0:14:0%:25:1E0:45:14:4:10:15 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:41 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:49 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:54 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:35:0%:67:1E0:49:35:20:15:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:47 0/0:0:0:0:0:61:0%:99:1E0:41:61:27:34:63 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:61:0%:99:1E0:42:61:32:29:61 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:43 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:57 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:40 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:44 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:14:26:41 0/0:0:0:0:0:34:0%:62:1E0:38:34:21:13:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:62:0%:99:1E0:40:62:39:23:62 0/0:0:0:0:0:49:0%:93:1E0:46:49:28:21:49 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:60:0%:99:1E0:43:60:35:25:60 0/0:0:0:0:0:30:0%:55:1E0:46:30:10:20:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:71:0%:99:1E0:43:71:38:33:73 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:38 MTB_anc 1715942 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|mmpL12_Rv1522c|gene1560|transcript|Transcript_gene1560|Coding|1/1|c.1671C>T|p.Gly557Gly|1671/3441|1671/3441|557/1146||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1715942G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1715942G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:30:11:19:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:44:17:27:45:97.78%:99:4.4304E-25:33:1:0:1:46 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:45:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:61 1/1:37:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:48 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:36:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:37:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:62 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:32:12:20:33:96.97%:99:4.7095E-18:37:1:0:1:35 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:67:29:38:67:100%:99:6.6743E-40:0:0:0:0:70 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 MTB_anc 1716472 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|mmpL12_Rv1522c|gene1560|transcript|Transcript_gene1560|Coding|1/1|c.1141C>T|p.Pro381Ser|1141/3441|1141/3441|381/1146||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1716472G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1716472G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:14:13:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:28 1/1:41:29:16:13:30:96.67%:99:2.6212E-16:38:1:0:1:30 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:76:41:35:76:100%:99:2.711E-45:0:0:0:0:78 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:33:20:13:34:97.06%:99:1.2301E-18:60:1:1:0:35 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:36:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:38:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 1716724 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|mmpL12_Rv1522c|gene1560|transcript|Transcript_gene1560|Coding|1/1|c.889T>G|p.Ser297Ala|889/3441|889/3441|297/1146||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1716724A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1716724A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:37:34:17:17:37 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:23 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:20 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:22:8:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:35 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:22 0/0:0:0:0:0:49:0%:93:1E0:39:49:22:27:50 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:27 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:19 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:26 0/0:0:0:0:0:17:0%:33:1E0:43:17:4:13:17 0/0:0:0:0:0:19:0%:37:1E0:39:19:6:13:20 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:43 0/0:0:0:0:0:23:0%:44:1E0:40:23:16:7:24 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:43 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:15 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:41 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:47 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:45 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:28 0/0:0:0:0:0:31:0%:59:1E0:37:31:16:15:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:22 0/0:0:0:0:0:23:0%:44:1E0:38:23:17:6:24 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:27 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:14:0%:25:1E0:44:14:7:7:14 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:25 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:16 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:14:0%:25:1E0:41:14:6:8:14 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:35 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:26:0%:47:1E0:37:26:11:15:27 0/0:0:0:0:0:22:0%:40:1E0:38:22:16:6:22 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:34 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:24 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:47 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:16:0%:29:1E0:40:16:10:6:16 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:18 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:43 0/0:0:0:0:0:27:0%:52:1E0:39:27:18:9:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:32 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:25 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:27 0/0:0:0:0:0:17:0%:33:1E0:42:17:6:11:17 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:18 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:36 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:19 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:38 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:37 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:44 0/0:0:0:0:0:17:0%:33:1E0:37:17:11:6:17 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:26 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:24 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:25 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:43 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:22 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:19 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:36 0/0:0:0:0:0:36:0%:66:1E0:36:36:14:22:38 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:38 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:27 0/0:0:0:0:0:34:0%:62:1E0:39:34:22:12:37 0/0:0:0:0:0:28:0%:51:1E0:37:28:18:10:28 0/0:0:0:0:0:44:0%:81:1E0:38:44:24:20:44 0/0:0:0:0:0:49:0%:93:1E0:39:49:35:14:51 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:39 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:38 0/0:0:0:0:0:39:0%:74:1E0:39:39:24:15:40 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:30 0/0:0:0:0:0:38:0%:70:1E0:38:38:17:21:41 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:43 0/0:0:0:0:0:30:0%:55:1E0:37:30:19:11:32 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:22 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:36 0/0:0:0:0:0:41:0%:78:1E0:37:41:15:26:41 0/0:0:0:0:0:32:0%:59:1E0:36:32:23:9:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:28 0/0:33:1:0:1:28:3.57%:41:5E-1:40:27:17:10:28 0/0:0:0:0:0:47:0%:89:1E0:38:47:30:17:48 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:27 0/0:0:0:0:0:42:0%:77:1E0:38:42:24:18:43 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:34 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:24 0/0:0:0:0:0:17:0%:33:1E0:45:17:12:5:17 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:27 0/0:0:0:0:0:13:0%:25:1E0:39:13:8:5:15 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:32 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:41 0/0:0:0:0:0:36:0%:66:1E0:38:36:22:14:39 MTB_anc 1719391 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv1524_Rv1524|gene1562|transcript|Transcript_gene1562|Coding|1/1|c.666T>C|p.Phe222Phe|666/1245|666/1245|222/414||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1719391T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1719391T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:20:13:7:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:46:31:18:13:32:96.88%:99:1.8007E-17:39:1:1:0:32 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:61:41:20:61:100%:99:2.609E-36:0:0:0:0:61 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:36:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:14:13:28:96.43%:99:3.7915E-15:30:1:1:0:29 1/1:38:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:36:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:16:12:29:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 1722702 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|pks5_Rv1527c|gene1565|transcript|Transcript_gene1565|Coding|1/1|c.5708T>G|p.Leu1903Arg|5708/6327|5708/6327|1903/2108||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1722702A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1722702A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:18:16:35:97.14%:99:3.2089E-19:60:1:0:1:35 1/1:43:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:35:21:14:36:97.22%:99:8.3613E-20:60:1:0:1:37 1/1:47:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:53:27:26:54:98.15%:99:2.2126E-30:38:1:0:1:54 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:36:18:18:37:97.3%:99:2.1762E-20:60:1:0:1:38 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:41:24:17:42:97.62%:99:2.5612E-23:38:1:0:1:42 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:45:35:10:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:30:15:15:31:96.77%:99:6.8754E-17:39:1:0:1:31 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:29:19:10:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:14:13:28:96.43%:99:3.7915E-15:34:1:1:0:28 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:56:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:23:12:11:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:29:14:15:30:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:37:63:32:31:63:100%:99:1.657E-37:0:0:0:0:64 1/1:41:34:17:17:35:97.14%:99:3.2089E-19:38:1:1:0:35 1/1:40:29:16:13:30:96.67%:99:2.6212E-16:38:1:0:1:30 1/1:38:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:43:23:20:45:95.56%:99:1.7144E-24:39:1:1:0:45 1/1:39:34:20:14:35:97.14%:99:3.2089E-19:39:1:0:1:35 MTB_anc 1726220 . C T . PASS AC=68;AF=0.227;AN=300;ANN=T|synonymous_variant|LOW|pks5_Rv1527c|gene1565|transcript|Transcript_gene1565|Coding|1/1|c.2190G>A|p.Glu730Glu|2190/6327|2190/6327|730/2108||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1726220C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1726220C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:38:36:26:10:36 0/0:0:0:0:0:12:0%:21:1E0:42:12:9:3:12 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:32 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:18 1/1:41:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:27:0%:52:1E0:39:27:19:8:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:22 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:15:0%:29:1E0:39:15:9:6:15 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 0/0:0:0:0:0:30:0%:55:1E0:38:30:24:6:30 0/0:0:0:0:0:9:0%:18:1E0:45:9:6:3:10 0/0:0:0:0:0:52:0%:96:1E0:38:52:40:12:52 0/0:0:0:0:0:25:0%:48:1E0:36:25:18:7:25 0/0:34:1:0:1:17:5.88%:24:5E-1:38:16:12:4:18 0/0:0:0:0:0:17:0%:33:1E0:37:17:12:5:17 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 1/1:37:9:6:3:10:90%:42:5.9538E-5:38:1:0:1:10 0/0:0:0:0:0:17:0%:33:1E0:39:17:10:7:17 0/0:0:0:0:0:22:0%:40:1E0:36:22:18:4:22 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:16 0/0:0:0:0:0:20:0%:36:1E0:38:20:14:6:20 0/0:0:0:0:0:31:0%:59:1E0:38:31:24:7:31 1/1:41:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:19 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:17 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:35:0%:67:1E0:39:35:25:10:35 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:32 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:18:0%:32:1E0:39:18:11:7:18 0/0:0:0:0:0:18:0%:32:1E0:38:18:16:2:18 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:30 0/0:0:0:0:0:32:0%:59:1E0:38:32:21:11:32 0/0:0:0:0:0:59:0%:99:1E0:39:59:33:26:59 0/0:0:0:0:0:37:0%:70:1E0:38:37:30:7:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:22:0%:40:1E0:38:22:14:8:23 0/0:0:0:0:0:27:0%:52:1E0:38:27:22:5:27 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:14 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:18 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:27 0/0:0:0:0:0:15:0%:29:1E0:39:15:9:6:16 0/0:0:0:0:0:39:0%:74:1E0:40:39:28:11:39 0/0:0:0:0:0:27:0%:52:1E0:37:27:22:5:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:21:8:30 0/0:0:0:0:0:10:0%:17:1E0:40:10:7:3:10 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:34 0/0:0:0:0:0:19:0%:37:1E0:39:19:13:6:20 0/0:0:0:0:0:13:0%:25:1E0:39:13:11:2:13 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:17 0/0:0:0:0:0:39:0%:74:1E0:39:39:31:8:39 0/0:0:0:0:0:31:0%:59:1E0:39:31:24:7:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:30 0/0:0:0:0:0:33:0%:63:1E0:38:33:26:7:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:27:17:10:28:96.43%:99:3.7915E-15:37:1:0:1:29 1/1:38:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:9:0%:18:1E0:40:9:5:4:9 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:25 1/1:41:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:11 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:31:23:8:32:96.88%:99:1.8007E-17:38:1:0:1:32 0/0:0:0:0:0:22:0%:40:1E0:39:22:17:5:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:25 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:20 0/0:0:0:0:0:13:0%:25:1E0:40:13:5:8:13 0/0:0:0:0:0:22:0%:40:1E0:37:22:14:8:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:22 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:26:0%:47:1E0:37:26:19:7:26 0/0:0:0:0:0:15:0%:29:1E0:43:15:9:6:15 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:19 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:17 0/0:0:0:0:0:10:0%:17:1E0:40:10:7:3:11 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:27 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:13 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:15:0%:29:1E0:41:15:15:0:15 0/0:0:0:0:0:36:0%:66:1E0:38:36:25:11:36 0/0:0:0:0:0:19:0%:37:1E0:37:19:15:4:20 0/0:0:0:0:0:31:0%:59:1E0:38:31:19:12:31 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:13 0/0:0:0:0:0:22:0%:40:1E0:38:22:15:7:22 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:21 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:27 0/0:0:0:0:0:17:0%:33:1E0:38:17:15:2:17 0/0:0:0:0:0:28:0%:51:1E0:37:28:19:9:31 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:19:0%:37:1E0:37:19:16:3:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:13:3:16 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:26 0/0:0:0:0:0:21:0%:40:1E0:37:21:17:4:21 0/0:0:0:0:0:16:0%:29:1E0:40:16:12:4:18 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:19:6:25 0/0:0:0:0:0:22:0%:40:1E0:38:22:15:7:23 0/0:0:0:0:0:14:0%:25:1E0:39:14:11:3:14 0/0:0:0:0:0:40:0%:74:1E0:39:40:26:14:44 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:24:2:26 1/1:37:35:30:5:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:18:0%:32:1E0:38:18:13:5:18 0/0:0:0:0:0:30:0%:55:1E0:38:30:23:7:30 1/1:37:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:11:0%:22:1E0:37:11:6:5:11 1/1:37:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:17:8:25 0/0:0:0:0:0:29:0%:55:1E0:36:29:22:7:30 0/0:0:0:0:0:20:0%:36:1E0:35:20:15:5:20 0/0:0:0:0:0:29:0%:55:1E0:36:29:24:5:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:22:4:26 0/0:0:0:0:0:24:0%:44:1E0:37:24:16:8:25 0/0:0:0:0:0:26:0%:47:1E0:37:26:21:5:26 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:28:0%:51:1E0:37:28:22:6:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:19:6:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:23 1/1:39:35:28:7:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:23:0%:44:1E0:39:23:17:6:23 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:29 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:16 1/1:36:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:34:0%:62:1E0:37:34:29:5:34 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:17 MTB_anc 1726816 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|pks5_Rv1527c|gene1565|transcript|Transcript_gene1565|Coding|1/1|c.1594A>C|p.Thr532Pro|1594/6327|1594/6327|532/2108||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1726816T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1726816T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:47:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:13:17:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:16:10:28:96.3%:99:1.4382E-14:38:1:0:1:29 1/1:40:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:39:21:18:40:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:29:15:14:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:35:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 MTB_anc 1728059 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|pks5_Rv1527c|gene1565|transcript|Transcript_gene1565|Coding|1/1|c.351C>T|p.His117His|351/6327|351/6327|117/2108||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1728059G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1728059G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:58:0%:99:1E0:47:58:27:31:58 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:39:0%:74:1E0:51:39:18:21:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:41:0%:78:1E0:48:41:21:20:41 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:29 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:42 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:47 0/0:0:0:0:0:27:0%:52:1E0:48:27:18:9:27 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:24:0%:44:1E0:49:24:14:10:24 0/0:0:0:0:0:19:0%:37:1E0:52:19:10:9:20 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:48:0%:89:1E0:44:48:20:28:48 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:0:0:0:0:43:0%:82:1E0:47:43:28:15:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:51:27:8:19:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:31 0/0:0:0:0:0:13:0%:25:1E0:49:13:8:5:13 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 1/1:44:28:14:14:29:96.55%:99:9.9776E-16:38:1:0:1:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:59:0%:99:1E0:47:59:33:26:59 0/0:0:0:0:0:48:0%:89:1E0:50:48:24:24:48 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:51:0%:97:1E0:44:51:25:26:51 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:43 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:21 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:44:0%:81:1E0:48:44:22:22:44 0/0:0:0:0:0:16:0%:29:1E0:49:16:6:10:16 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:11:22:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:52:0%:96:1E0:44:52:24:28:54 0/0:0:0:0:0:45:0%:85:1E0:41:45:28:17:45 0/0:0:0:0:0:10:0%:17:1E0:42:10:4:6:10 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:75:0%:99:1E0:46:75:38:37:75 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:12:0%:21:1E0:52:12:8:4:12 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:39:0%:74:1E0:54:39:14:25:39 0/0:0:0:0:0:25:0%:48:1E0:51:25:12:13:25 0/0:0:0:0:0:18:0%:32:1E0:50:18:8:10:18 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:52:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:16:0%:29:1E0:52:16:8:8:16 0/0:0:0:0:0:43:0%:82:1E0:49:43:22:21:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:34:0%:62:1E0:49:34:12:22:34 0/0:0:0:0:0:21:0%:40:1E0:52:21:9:12:21 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:49:0%:93:1E0:42:49:18:31:49 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:34 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:60:1:1:0:25:4%:38:5E-1:44:24:10:14:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:23 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:52:0%:96:1E0:45:52:19:33:52 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:44 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:32 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:49 0/0:0:0:0:0:49:0%:93:1E0:44:49:31:18:49 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:54 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:35 0/0:0:0:0:0:60:0%:99:1E0:43:60:32:28:60 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:42 0/0:0:0:0:0:55:0%:99:1E0:40:55:29:26:55 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:41 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:46 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:53:0%:99:1E0:40:53:24:29:53 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:49:0%:93:1E0:41:49:19:30:49 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:35 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:60:0%:99:1E0:41:60:27:33:60 0/0:0:0:0:0:32:0%:59:1E0:40:32:24:8:32 MTB_anc 1728622 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|pks5_Rv1527c-papA4_Rv1528c|gene1565-gene1566|intergenic_region|gene1565-gene1566|||n.1728622C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:13:11:25:96%:99:3.101E-14:0:0:0:0:27 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:22:11:34:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:53:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:20:17:38:97.37%:99:5.7269E-22:0:0:0:0:39 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:26:14:12:27:96.3%:99:1.4382E-14:37:1:0:1:28 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:48:15:33:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:76:38:38:76:100%:99:2.711E-45:0:0:0:0:78 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:15:22:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:39:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:44:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 1736938 . A G . PASS AC=14;AF=0.047;AN=300;ANN=G|synonymous_variant|LOW|ileS_Rv1536|gene1574|transcript|Transcript_gene1574|Coding|1/1|c.420A>G|p.Val140Val|420/3126|420/3126|140/1041||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1736938A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1736938A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:27:0%:52:1E0:53:27:14:13:27 0/0:0:0:0:0:48:0%:89:1E0:44:48:31:17:48 0/0:0:0:0:0:38:0%:70:1E0:46:38:21:17:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:35 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:34:0%:62:1E0:50:34:14:20:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:48 0/0:0:0:0:0:41:0%:78:1E0:49:41:20:21:42 0/0:0:0:0:0:37:0%:70:1E0:48:37:22:15:38 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:32 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:52 0/0:0:0:0:0:22:0%:40:1E0:51:22:13:9:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:18 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:49 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:23 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:50 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:26 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:20 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:67:0%:99:1E0:47:67:36:31:68 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:43 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:45 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:31 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:43 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:21:0%:40:1E0:46:21:14:7:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:48:26:7:19:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:34 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:44 0/0:0:0:0:0:48:0%:89:1E0:47:48:23:25:49 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:50:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:46 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:46 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:78:0%:99:1E0:45:78:34:44:78 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:19 0/0:0:0:0:0:38:0%:70:1E0:45:38:25:13:39 0/0:0:0:0:0:18:0%:32:1E0:53:18:7:11:19 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:44:0%:81:1E0:47:44:19:25:46 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:25 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:30 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:43 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:47:0%:89:1E0:46:47:19:28:48 0/0:0:0:0:0:18:0%:32:1E0:51:18:13:5:18 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:40 0/0:0:0:0:0:53:0%:99:1E0:44:53:25:28:54 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:37 0/0:0:0:0:0:11:0%:22:1E0:47:11:6:5:13 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:44:0%:81:1E0:45:44:27:17:44 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:47 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:49 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:50 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:25 0/0:0:0:0:0:69:0%:99:1E0:42:69:26:43:70 0/0:0:0:0:0:64:0%:99:1E0:42:64:28:36:64 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:52 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:56:0%:99:1E0:42:56:30:26:56 0/0:0:0:0:0:49:0%:93:1E0:39:49:22:27:52 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:53 0/0:0:0:0:0:51:0%:97:1E0:41:51:23:28:52 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:38 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:42 0/0:0:0:0:0:43:0%:82:1E0:38:43:25:18:44 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:30 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:47 0/0:0:0:0:0:38:0%:70:1E0:37:38:22:16:39 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:39 0/0:0:0:0:0:62:0%:99:1E0:38:62:33:29:63 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:52 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:38 0/0:0:0:0:0:51:0%:97:1E0:44:51:25:26:52 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:45:0%:85:1E0:46:45:28:17:45 0/0:0:0:0:0:48:0%:89:1E0:39:48:25:23:52 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:42 0/0:0:0:0:0:56:0%:99:1E0:42:56:26:30:56 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:31 MTB_anc 1739546 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|ileS_Rv1536|gene1574|transcript|Transcript_gene1574|Coding|1/1|c.3028A>G|p.Ile1010Val|3028/3126|3028/3126|1010/1041||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1739546A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1739546A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:42:55:25:30:56 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:47:0%:89:1E0:48:47:20:27:47 0/0:0:0:0:0:36:0%:66:1E0:51:36:21:15:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:34:0%:62:1E0:53:34:18:16:34 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:48 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:51:0%:97:1E0:46:51:32:19:53 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:32 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:21 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:42 0/0:0:0:0:0:51:0%:97:1E0:42:51:17:34:52 0/0:0:0:0:0:22:0%:40:1E0:50:22:8:14:24 0/0:0:0:0:0:36:0%:66:1E0:47:36:13:23:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:29 0/0:0:0:0:0:23:0%:44:1E0:50:23:12:11:23 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:49:0%:93:1E0:46:49:24:25:49 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:59:0%:99:1E0:49:59:29:30:59 0/0:0:0:0:0:54:0%:99:1E0:46:54:31:23:54 0/0:0:0:0:0:40:0%:74:1E0:45:40:28:12:42 0/0:0:0:0:0:49:0%:93:1E0:42:49:19:30:49 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:37:1:0:1:40:2.5%:62:5E-1:44:39:24:15:41 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:22 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:7:18:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:65:0%:99:1E0:43:65:32:33:65 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:42 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:36 0/0:0:0:0:0:42:0%:77:1E0:48:42:19:23:42 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:47 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:27:0%:52:1E0:52:27:13:14:27 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:38 0/0:0:0:0:0:53:0%:99:1E0:48:53:29:24:54 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:24:0%:44:1E0:50:24:8:16:24 0/0:0:0:0:0:16:0%:29:1E0:51:16:7:9:17 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:42:0%:77:1E0:48:42:17:25:43 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:16 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:4:19:23 0/0:0:0:0:0:40:0%:74:1E0:51:40:18:22:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:51 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 0/0:37:1:1:0:28:3.57%:41:5E-1:47:27:14:13:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:46 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:41 0/0:0:0:0:0:18:0%:32:1E0:51:18:15:3:18 0/0:38:1:1:0:48:2.08%:76:5E-1:43:47:16:31:48 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:12:26:39 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:19 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:20 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:38:0%:70:1E0:48:38:15:23:39 0/1:38:11:3:8:31:35.48%:37:1.6659E-4:45:20:10:10:31 0/1:43:23:10:13:59:38.98%:80:8.221E-9:43:36:21:15:59 0/0:0:0:0:0:56:0%:99:1E0:42:56:29:27:56 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:16:0%:29:1E0:39:16:8:8:16 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:24:11:35 0/0:0:0:0:0:55:0%:99:1E0:42:55:25:30:55 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:51 0/0:0:0:0:0:59:0%:99:1E0:41:59:26:33:59 0/0:0:0:0:0:48:0%:89:1E0:42:48:32:16:48 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:32 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:31:14:46 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:39 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:45 0/0:0:0:0:0:53:0%:99:1E0:41:53:28:25:55 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:65:0%:99:1E0:39:65:39:26:67 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:48 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:52 0/0:0:0:0:0:48:0%:89:1E0:42:48:24:24:48 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:31 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:41 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:45 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:58:0%:99:1E0:43:58:35:23:58 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 MTB_anc 1741624 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|ansA_Rv1538c|gene1576|transcript|Transcript_gene1576|Coding|1/1|c.569G>C|p.Arg190Pro|569/981|569/981|190/326||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1741624C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1741624C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:60:30:30:60:100%:99:1.035E-35:0:0:0:0:62 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:48:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:46:23:23:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:20:21:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:41:23:18:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:61:35:26:61:100%:99:2.609E-36:0:0:0:0:62 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 1743969 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|lprI_Rv1541c|gene1579|transcript|Transcript_gene1579|Coding|1/1|c.403A>G|p.Thr135Ala|403/594|403/594|135/197||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1743969T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1743969T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:47 0/0:0:0:0:0:22:0%:40:1E0:52:22:15:7:22 0/0:0:0:0:0:59:0%:99:1E0:44:59:33:26:60 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:31 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:18 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:51:27:13:14:27 0/0:0:0:0:0:37:0%:70:1E0:53:37:17:20:37 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:18:0%:32:1E0:53:18:9:9:18 0/0:0:0:0:0:41:0%:78:1E0:50:41:23:18:43 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:25 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:22:0%:40:1E0:42:22:6:16:23 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:30 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:51 0/0:0:0:0:0:34:0%:62:1E0:50:34:16:18:34 0/0:0:0:0:0:49:0%:93:1E0:48:49:19:30:49 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:22:0%:40:1E0:45:22:5:17:23 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:21 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:37 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:36:0%:66:1E0:50:36:15:21:36 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:65:0%:99:1E0:45:65:29:36:66 0/0:0:0:0:0:51:0%:97:1E0:47:51:21:30:52 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:14:0%:25:1E0:46:14:7:7:14 0/0:0:0:0:0:19:0%:37:1E0:46:19:13:6:19 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:45 0/0:0:0:0:0:20:0%:36:1E0:55:20:11:9:20 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:45 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:22 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:37 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:50:0%:92:1E0:44:50:21:29:51 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:54:0%:99:1E0:51:54:29:25:54 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:44:0%:81:1E0:45:44:16:28:46 0/0:0:0:0:0:37:0%:70:1E0:44:37:13:24:39 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:55:0%:99:1E0:46:55:24:31:56 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:37 0/0:0:0:0:0:13:0%:25:1E0:52:13:11:2:13 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:32:0%:59:1E0:51:32:16:16:33 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:22 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:47 0/0:0:0:0:0:31:0%:59:1E0:44:31:10:21:35 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:41 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:46:0%:85:1E0:49:46:19:27:46 0/0:0:0:0:0:32:0%:59:1E0:51:32:15:17:33 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:48 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:41 0/0:0:0:0:0:55:0%:99:1E0:46:55:28:27:56 0/0:0:0:0:0:30:0%:55:1E0:49:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:36 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:44 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:50 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:13:24:37 0/0:0:0:0:0:53:0%:99:1E0:43:53:31:22:54 0/0:0:0:0:0:58:0%:99:1E0:42:58:28:30:59 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 1/1:42:35:16:19:36:97.22%:99:8.3613E-20:39:1:0:1:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:43 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:52:0%:96:1E0:38:52:25:27:53 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:42 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:48 0/0:0:0:0:0:31:0%:59:1E0:40:31:8:23:33 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:41 0/0:0:0:0:0:52:0%:96:1E0:41:52:25:27:55 0/0:0:0:0:0:59:0%:99:1E0:39:59:28:31:59 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:32 0/0:0:0:0:0:36:0%:66:1E0:46:36:10:26:37 0/0:0:0:0:0:59:0%:99:1E0:38:59:27:32:62 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:45 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:41 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:11:24:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:41 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:45 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:58:0%:99:1E0:45:58:21:37:60 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:47 MTB_anc 1747884 . C A . PASS AC=14;AF=0.047;AN=300;ANN=A|missense_variant|MODERATE|dnaE1_Rv1547|gene1585|transcript|Transcript_gene1585|Coding|1/1|c.191C>A|p.Ala64Asp|191/3555|191/3555|64/1184||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1747884C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1747884C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:43:47:29:18:49 0/0:0:0:0:0:22:0%:40:1E0:53:22:11:11:22 0/0:0:0:0:0:66:0%:99:1E0:48:66:37:29:66 0/0:60:1:0:1:27:3.7%:41:5E-1:43:26:14:12:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:34 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:20 0/0:0:0:0:0:55:0%:99:1E0:45:55:31:24:55 0/0:0:0:0:0:17:0%:33:1E0:49:17:11:6:17 0/0:0:0:0:0:32:0%:59:1E0:45:32:22:10:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:52 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:44 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:24 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:17 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:39:0%:74:1E0:46:39:25:14:39 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:19 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:17 0/0:0:0:0:0:33:0%:63:1E0:47:33:23:10:34 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:44 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:41 0/0:0:0:0:0:57:0%:99:1E0:47:57:41:16:57 0/0:0:0:0:0:40:0%:74:1E0:48:40:25:15:40 0/0:0:0:0:0:41:0%:78:1E0:45:41:27:14:42 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:48:0%:89:1E0:46:48:30:18:49 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:24:0%:44:1E0:48:24:17:7:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:21:12:33 0/0:0:0:0:0:15:0%:29:1E0:48:15:11:4:15 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:26:10:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:23 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:24:10:35 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:29:13:42 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:45 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:58:30:28:59:98.31%:99:2.4634E-33:60:1:0:1:59 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:16:0%:29:1E0:48:16:9:7:16 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:18 0/0:0:0:0:0:39:0%:74:1E0:48:39:27:12:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:30 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:43 0/0:60:1:1:0:42:2.38%:66:5E-1:44:41:20:21:42 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:41 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:42 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:30:15:46 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:37:0%:70:1E0:50:37:18:19:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:18:10:28 0/0:0:0:0:0:33:0%:63:1E0:50:33:20:13:33 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:57:0%:99:1E0:43:57:34:23:57 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:26:11:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:36:0%:66:1E0:37:36:23:13:37 0/0:0:0:0:0:17:0%:33:1E0:43:17:13:4:18 0/0:0:0:0:0:22:0%:40:1E0:46:22:18:4:22 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:49:31:18:13:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:22:9:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:28:17:46 0/0:0:0:0:0:35:0%:67:1E0:38:35:26:9:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:39 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:29 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:53 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:54 0/0:0:0:0:0:34:0%:62:1E0:45:34:27:7:34 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:29 0/0:0:0:0:0:53:0%:99:1E0:41:53:28:25:56 0/0:0:0:0:0:47:0%:89:1E0:42:47:29:18:49 0/0:0:0:0:0:44:0%:81:1E0:42:44:27:17:46 0/0:0:0:0:0:40:0%:74:1E0:36:40:19:21:43 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:43 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:32 0/0:0:0:0:0:41:0%:78:1E0:39:41:29:12:47 0/0:0:0:0:0:30:0%:55:1E0:38:30:20:10:31 0/0:0:0:0:0:41:0%:78:1E0:40:41:28:13:44 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:20:7:30 0/0:0:0:0:0:57:0%:99:1E0:40:57:30:27:58 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:42 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:39 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:40 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:40 0/0:0:0:0:0:53:0%:99:1E0:48:53:30:23:53 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:48 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:40 MTB_anc 1752756 . C T . PASS AC=4;AF=0.013;AN=298;ANN=T|missense_variant|MODERATE|PPE21_Rv1548c|gene1586|transcript|Transcript_gene1586|Coding|1/1|c.578G>A|p.Gly193Asp|578/2037|578/2037|193/678||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1752756C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1752756C>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:18 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:60:1:1:0:25:4%:38:5E-1:48:24:10:14:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:48:32:20:12:32 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:19 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:39 0/0:0:0:0:0:13:0%:25:1E0:45:13:5:8:13 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:42 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:17:0%:33:1E0:44:17:13:4:18 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:8:16:25 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:18 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:30 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:12:22:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:25:8:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:48 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:44 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:45 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:19:0%:32:1E0:45:18:10:8:19 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:40:0%:74:1E0:43:39:25:14:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:60:1:0:1:27:3.7%:41:5E-1:42:26:15:11:29 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:54:0%:99:1E0:42:54:33:21:54 0/0:0:0:0:0:15:0%:29:1E0:42:15:5:10:15 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:15:26:41 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:32 0/0:0:0:0:0:17:0%:33:1E0:42:17:5:12:17 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:42:0%:77:1E0:50:42:18:24:42 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:22 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:41:0%:78:1E0:43:41:26:15:42 0/0:0:0:0:0:57:0%:99:1E0:44:57:26:31:58 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:36 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:42 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:19:8:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:52:0%:96:1E0:43:52:32:20:52 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:39 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:49:0%:93:1E0:40:49:28:21:51 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:32:0%:59:1E0:44:32:24:8:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:47:0%:89:1E0:42:47:31:16:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:19 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:34 0/0:0:0:0:0:32:0%:59:1E0:37:32:15:17:33 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:19 0/0:0:0:0:0:53:0%:99:1E0:41:53:28:25:53 0/0:0:0:0:0:54:0%:99:1E0:40:54:24:30:55 0/0:0:0:0:0:32:0%:59:1E0:41:31:23:8:33 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:20 0/0:0:0:0:0:39:0%:74:1E0:37:39:21:18:40 0/0:0:0:0:0:33:0%:63:1E0:37:33:25:8:34 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:41 0/0:0:0:0:0:41:0%:78:1E0:37:41:26:15:42 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:36 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:25:11:39 0/0:0:0:0:0:19:0%:37:1E0:39:19:13:6:20 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:37 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:34 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:43 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:0:0:0:0:52:0%:96:1E0:37:52:28:24:54 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:27:13:41 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:34 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:39 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:23 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:41 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:47 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:34 MTB_anc 1753519 . G GC . PASS AC=174;AF=0.580;AN=300;ANN=GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1753519_1753520insC||||||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1753519_1753520insC||||||,GC|intergenic_region|MODIFIER|PPE21_Rv1548c-fadD11_Rv1550|gene1586-gene1587|intergenic_region|gene1586-gene1587|||n.1753519_1753520insC||||||;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:31:10:21:37:83.78%:99:3.4914E-15:38:6:5:1:39 0/1:48:12:4:8:17:70.59%:49:1.1285E-5:43:5:4:1:17 0/1:47:37:14:23:45:82.22%:99:8.5365E-18:33:8:6:2:45 0/1:44:19:10:9:22:86.36%:89:1.0931E-9:32:3:3:0:22 1/1:41:20:7:13:22:90.91%:98:1.3117E-10:48:2:1:1:22 0/1:42:22:10:12:25:84.62%:99:5.5261E-11:41:4:3:1:26 1/1:55:20:9:11:22:90.91%:98:1.3117E-10:32:2:2:0:22 1/1:47:15:8:7:16:93.75%:75:2.8282E-8:60:1:0:1:18 0/1:51:14:3:11:18:77.78%:60:8.0605E-7:42:4:3:1:19 0/1:46:9:2:7:13:69.23%:36:2.2883E-4:30:4:3:1:13 0/1:48:18:7:11:21:85.71%:84:3.7603E-9:35:3:2:1:21 0/1:47:17:6:11:24:70.83%:70:8.1543E-8:37:7:5:2:24 0/1:55:15:8:7:17:88.24%:71:7.3277E-8:36:2:2:0:17 0/1:47:27:12:15:34:79.41%:99:7.9014E-13:33:7:5:2:34 0/1:45:12:4:8:14:85.71%:55:2.9913E-6:35:2:2:0:14 0/1:43:18:5:13:27:66.67%:73:4.8354E-8:33:9:9:0:27 1/1:46:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:49:13:7:6:15:86.67%:60:8.7675E-7:34:2:1:1:15 0/1:42:10:3:7:12:76.92%:42:5.3843E-5:47:3:0:3:13 1/1:53:19:9:10:21:90.48%:93:4.7003E-10:33:2:2:0:21 0/1:41:11:4:7:16:68.75%:44:3.3854E-5:40:5:4:1:16 0/1:46:25:10:15:31:78.12%:99:8.3928E-12:34:7:7:0:32 0/1:48:21:11:10:25:84%:97:1.8789E-10:33:4:4:0:25 0/1:49:35:12:23:39:87.5%:99:1.1364E-17:32:5:4:1:40 0/1:39:17:7:10:18:89.47%:82:5.9414E-9:48:2:2:0:19 0/1:38:14:6:8:17:82.35%:63:4.8851E-7:35:3:3:0:17 0/1:46:12:6:6:14:85.71%:55:2.9913E-6:30:2:2:0:14 0/1:41:10:4:6:13:76.92%:42:5.3843E-5:52:3:2:1:14 0/1:49:11:7:4:16:68.75%:44:3.3854E-5:38:5:2:3:16 0/1:43:21:7:14:23:87.5%:99:9.0704E-11:31:3:3:0:24 0/1:44:22:8:14:29:75.86%:95:2.7763E-10:39:7:7:0:29 0/1:45:15:5:10:22:68.18%:61:7.4178E-7:36:7:3:4:22 0/1:49:18:9:9:25:72%:75:2.6626E-8:37:7:6:1:25 0/1:43:14:1:13:19:73.68%:59:1.2025E-6:33:5:4:1:19 0/1:48:22:10:12:29:75.86%:95:2.7763E-10:39:7:5:2:29 0/1:43:23:10:13:26:88.46%:99:2.7767E-12:30:2:2:0:26 0/1:43:21:11:10:27:75%:90:8.7917E-10:33:7:6:1:28 0/1:47:30:8:22:38:78.95%:99:2.1946E-14:31:7:6:1:38 1/1:44:26:11:15:28:92.86%:99:5.6872E-14:36:2:2:0:28 0/1:42:31:13:18:40:77.5%:99:1.911E-14:40:9:7:2:40 0/1:42:22:7:15:28:75.86%:95:2.7763E-10:34:7:7:0:30 0/1:45:18:6:12:22:81.82%:81:7.1052E-9:42:4:4:0:22 0/1:47:17:6:11:22:77.27%:74:3.8368E-8:45:5:2:3:22 0/1:40:17:5:12:20:85%:78:1.2848E-8:33:3:3:0:20 1/1:37:22:10:12:22:91.67%:99:1.0078E-11:54:2:2:0:24 0/1:43:20:10:10:26:74.07%:87:1.8273E-9:37:6:4:2:27 0/1:46:18:7:11:26:69.23%:74:3.6611E-8:37:8:6:2:27 0/1:45:32:15:17:41:78.05%:99:5.8981E-15:36:9:8:1:41 0/1:44:30:11:19:34:85.71%:99:2.5943E-15:32:4:3:1:37 0/1:46:19:5:14:26:70.37%:79:1.2089E-8:34:8:6:2:27 0/1:47:11:2:9:15:73.33%:46:2.4988E-5:34:4:4:0:15 0/1:41:22:7:15:26:81.48%:99:5.5261E-11:34:4:3:1:27 0/1:41:13:6:7:15:86.67%:60:8.7675E-7:31:2:2:0:15 0/1:47:27:9:18:31:87.1%:99:1.125E-13:32:4:4:0:31 0/1:44:17:11:6:20:80.95%:76:2.3502E-8:32:4:3:1:21 0/1:41:24:12:12:31:77.42%:99:2.7115E-11:31:7:6:1:31 0/1:41:26:7:19:31:83.87%:99:8.0999E-13:34:5:5:0:31 0/1:46:12:8:4:14:85.71%:55:2.9913E-6:33:2:2:0:14 0/1:44:26:10:16:32:76.47%:99:4.1482E-12:35:8:6:2:34 0/1:53:17:8:9:23:73.91%:72:5.7694E-8:33:6:5:1:23 0/1:44:15:4:11:19:75%:64:3.8543E-7:39:5:4:1:20 0/1:43:12:5:7:18:66.67%:48:1.4831E-5:31:6:5:1:18 0/1:40:15:8:7:17:88.24%:71:7.3277E-8:31:2:2:0:17 0/1:48:10:4:6:17:58.82%:38:1.4831E-4:37:7:6:1:18 0/1:45:19:7:12:25:76%:82:5.8245E-9:33:6:6:0:25 0/1:44:32:10:22:37:86.49%:99:2.0653E-16:40:4:3:1:37 0/1:44:17:9:8:23:73.91%:72:5.7694E-8:33:6:4:2:23 0/1:44:28:15:13:33:84.85%:99:6.9527E-14:33:5:4:1:33 0/1:45:16:7:9:19:84.21%:73:4.357E-8:32:3:2:1:19 0/1:50:8:3:5:11:72.73%:32:5.16E-4:32:3:2:1:11 0/1:50:17:6:11:22:77.27%:74:3.8368E-8:33:5:4:1:22 0/1:49:24:12:12:27:88.89%:99:2.0853E-12:31:3:3:0:27 0/1:52:15:6:9:18:83.33%:68:1.4655E-7:41:3:2:1:18 0/1:39:17:5:12:19:85%:78:1.2848E-8:44:3:3:0:20 0/1:42:39:17:22:47:82.98%:99:7.4895E-19:36:8:7:1:47 0/1:40:15:7:8:20:75%:64:3.8543E-7:33:5:5:0:20 1/1:40:11:5:6:12:91.67%:58:1.4176E-6:0:0:0:0:12 0/1:52:12:7:5:14:85.71%:55:2.9913E-6:48:2:1:1:14 0/1:46:19:7:12:26:73.08%:80:8.6144E-9:33:7:7:0:26 1/1:48:21:10:11:23:91.3%:99:3.6437E-11:36:2:1:1:23 0/1:45:17:7:10:25:68%:69:1.0983E-7:34:8:8:0:25 0/1:42:20:11:9:25:80%:89:1.1273E-9:39:5:3:2:25 0/1:46:19:8:11:24:76%:82:5.8245E-9:34:6:4:2:25 0/1:48:17:5:12:25:68%:69:1.0983E-7:35:8:7:1:25 0/1:40:17:2:15:19:89.47%:82:5.9414E-9:32:2:1:1:19 0/1:41:18:8:10:22:81.82%:81:7.1052E-9:33:4:4:0:22 1/1:44:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:55:14:6:8:15:93.33%:69:1.0315E-7:33:1:1:0:15 0/1:42:18:9:9:21:85.71%:84:3.7603E-9:35:3:3:0:21 0/1:45:10:7:3:14:71.43%:41:7.6278E-5:39:4:3:1:14 0/1:48:23:11:12:29:79.31%:99:5.3984E-11:33:6:6:0:29 0/1:45:20:6:14:25:80%:89:1.1273E-9:39:5:4:1:25 0/1:40:15:4:11:22:65.22%:60:9.5813E-7:34:8:7:1:23 1/1:50:21:7:14:22:95.45%:99:1.0931E-11:31:1:1:0:22 0/1:46:18:7:11:25:66.67%:73:4.8354E-8:38:9:9:0:27 0/1:47:13:3:10:17:76.47%:55:2.5647E-6:30:4:3:1:17 1/1:47:12:5:7:13:92.31%:58:1.3461E-6:36:1:1:0:13 0/1:40:21:11:10:27:77.78%:92:5.6888E-10:35:6:5:1:27 0/1:42:23:8:15:30:76.67%:99:8.7055E-11:31:7:7:0:30 0/1:42:16:5:11:23:69.57%:66:2.4726E-7:34:7:7:0:23 0/1:41:27:10:17:31:81.82%:99:4.5192E-13:38:6:5:1:33 0/1:45:23:10:13:29:79.31%:99:5.3984E-11:38:6:4:2:29 0/1:46:18:1:17:22:81.82%:81:7.1052E-9:32:4:4:0:22 1/1:44:14:8:6:14:93.33%:69:1.0315E-7:35:1:1:0:15 0/1:35:10:4:6:11:83.33%:47:1.7011E-5:36:1:1:0:12 0/1:41:18:9:9:21:85.71%:84:3.7603E-9:33:3:3:0:21 0/1:42:18:7:11:23:78.26%:79:1.1937E-8:34:5:5:0:23 0/1:41:23:6:17:30:74.19%:98:1.3219E-10:34:8:6:2:31 1/1:44:29:12:17:32:90.62%:99:3.5714E-15:30:3:3:0:32 0/1:48:25:14:11:31:80.65%:99:4.9949E-12:34:6:5:1:31 1/1:45:22:9:13:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:45:17:9:8:18:94.44%:86:2.0936E-9:26:1:1:0:18 0/1:47:12:7:5:17:70.59%:49:1.1285E-5:33:5:5:0:17 1/1:42:26:9:17:27:92.86%:99:5.6872E-14:34:2:2:0:29 0/1:39:13:7:6:20:65%:51:6.4422E-6:31:7:6:1:20 0/1:42:24:7:17:34:70.59%:99:8.7205E-11:32:10:10:0:34 0/1:40:24:15:9:27:88.89%:99:2.0853E-12:31:3:3:0:28 0/1:45:28:12:16:32:87.5%:99:3.2142E-14:33:4:3:1:32 0/1:43:14:5:9:16:82.35%:63:4.8851E-7:36:3:3:0:18 0/1:48:23:10:13:35:65.71%:93:4.6576E-10:33:12:11:1:36 0/1:46:40:19:21:48:83.33%:99:2.2074E-19:31:8:8:0:48 0/1:44:23:14:9:27:85.19%:99:1.6161E-11:33:4:4:0:27 0/1:47:21:8:13:25:84%:97:1.8789E-10:30:4:4:0:25 0/1:40:25:11:14:30:75.76%:99:1.3235E-11:32:8:7:1:34 0/1:45:17:9:8:23:73.91%:72:5.7694E-8:33:6:6:0:23 1/1:44:24:6:18:26:92.31%:99:7.6222E-13:27:2:2:0:26 1/1:37:23:6:17:23:95.83%:99:7.7525E-13:32:1:0:1:24 0/1:39:22:9:13:27:81.48%:99:1.0343E-10:32:5:5:0:27 0/1:44:18:8:10:24:69.23%:74:3.6611E-8:32:8:7:1:26 0/1:42:26:12:14:30:81.25%:99:1.5064E-12:31:6:5:1:32 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:39:26:8:18:31:78.79%:99:2.5824E-12:32:7:7:0:33 0/1:41:23:11:12:25:88.46%:99:7.3681E-12:30:3:3:0:26 0/1:38:22:8:14:30:70.97%:92:5.875E-10:36:9:8:1:31 0/1:38:24:9:15:30:77.42%:99:2.7115E-11:31:7:6:1:31 0/1:44:17:7:10:22:77.27%:76:2.3502E-8:40:4:2:2:22 0/1:42:32:6:26:41:78.05%:99:5.8981E-15:31:9:9:0:41 0/1:42:19:9:10:25:76%:82:5.8245E-9:31:6:5:1:25 1/1:41:21:9:12:23:91.3%:99:3.6437E-11:35:2:2:0:23 0/1:45:14:5:9:16:87.5%:65:2.5454E-7:29:2:2:0:16 0/1:44:17:4:13:21:80.95%:78:1.2848E-8:30:3:3:0:21 0/1:44:17:4:13:21:80.95%:76:2.3502E-8:41:4:2:2:21 0/1:44:19:9:10:22:82.61%:86:2.1316E-9:32:4:3:1:23 0/1:43:22:5:17:27:81.48%:99:5.5261E-11:33:4:2:2:27 1/1:40:31:7:24:33:93.94%:99:8.2416E-17:33:2:1:1:34 1/1:44:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:43:23:9:14:28:82.14%:99:3.103E-11:35:5:5:0:28 0/1:46:22:7:15:28:78.57%:97:1.7583E-10:32:6:5:1:28 0/1:40:21:13:8:33:61.76%:83:4.9442E-9:38:13:11:2:37 0/1:43:22:6:16:35:62.86%:87:1.7197E-9:31:13:12:1:35 MTB_anc 1756524 . C T . PASS AC=18;AF=0.060;AN=300;ANN=T|synonymous_variant|LOW|plsB1_Rv1551|gene1588|transcript|Transcript_gene1588|Coding|1/1|c.1080C>T|p.Tyr360Tyr|1080/1866|1080/1866|360/621||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1756524C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1756524C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:40 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:0:59:0%:99:1E0:44:59:29:30:59 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:24:0%:44:1E0:46:24:7:17:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:20:8:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:31:0%:59:1E0:50:31:8:23:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 1/1:44:28:13:15:29:96.55%:99:9.9776E-16:39:1:1:0:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:15:0%:29:1E0:47:15:9:6:15 0/0:0:0:0:0:51:0%:97:1E0:46:51:27:24:53 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:8:19:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:38 0/0:0:0:0:0:12:0%:21:1E0:43:12:5:7:12 0/0:60:1:1:0:27:3.7%:41:5E-1:45:26:11:15:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:53 0/0:0:0:0:0:28:0%:51:1E0:48:28:18:10:28 0/0:0:0:0:0:43:0%:82:1E0:46:43:17:26:45 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:35 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:27 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:31 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:29 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:53 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:22 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:7:20:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:36:0%:66:1E0:50:36:18:18:37 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:28 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:45 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:45 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:20 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:44 0/0:0:0:0:0:37:0%:70:1E0:48:37:24:13:38 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:44 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:41 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:51 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:32 0/0:0:0:0:0:19:0%:37:1E0:50:19:12:7:19 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:26 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:18 1/1:50:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:20:0%:36:1E0:46:20:5:15:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:54:0%:99:1E0:41:54:26:28:56 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:14:0%:25:1E0:48:14:5:9:15 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:32 0/0:0:0:0:0:19:0%:37:1E0:46:19:15:4:19 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:39 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:50:0%:92:1E0:40:50:24:26:53 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:24 0/0:0:0:0:0:42:0%:77:1E0:43:42:27:15:44 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:35 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:20 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:22 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:47:0%:89:1E0:42:47:31:16:47 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:46 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:34 0/0:0:0:0:0:49:0%:93:1E0:45:49:27:22:50 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:19 0/0:0:0:0:0:67:0%:99:1E0:44:67:32:35:67 0/0:0:0:0:0:58:0%:99:1E0:44:58:31:27:58 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:40 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:37 0/0:37:1:0:1:46:2.17%:73:5E-1:40:45:22:23:46 0/0:0:0:0:0:50:0%:92:1E0:40:50:32:18:54 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:44 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:39 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:48 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:50 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:48 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:53:0%:99:1E0:38:53:26:27:53 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 1/1:41:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:53 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:24 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:47 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:45:0%:85:1E0:43:45:27:18:47 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 MTB_anc 1759904 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|frdB_Rv1553|gene1590|transcript|Transcript_gene1590|Coding|1/1|c.470C>T|p.Ser157Leu|470/744|470/744|157/247||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1759904C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1759904C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:34:15:19:35:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:58:20:38:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:28:8:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:19:12:32:96.88%:99:1.8007E-17:37:1:0:1:32 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:52:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:55:32:23:56:98.21%:99:1.4593E-31:60:1:0:1:56 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:28:18:10:29:96.55%:99:9.9776E-16:39:1:1:0:29 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:65:29:36:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:45:14:31:46:97.83%:99:1.1441E-25:60:1:1:0:48 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:37:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:61:33:28:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 1760333 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|stop_gained|HIGH|frdC_Rv1554|gene1591|transcript|Transcript_gene1591|Coding|1/1|c.159C>A|p.Tyr53*|159/381|159/381|53/126||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1760333C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1760333C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:53:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:49:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:53:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:53:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:60:34:26:60:100%:99:1.035E-35:0:0:0:0:61 1/1:47:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:53:37:16:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:26:10:16:27:96.3%:99:1.4382E-14:37:1:1:0:28 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:23:10:13:24:95.83%:99:1.2146E-13:0:0:0:0:26 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 1760923 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|frdD_Rv1555|gene1592|transcript|Transcript_gene1592|Coding|1/1|c.372C>T|p.Thr124Thr|372/378|372/378|124/125||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1760923C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1760923C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:36:13:23:37:97.3%:99:2.1762E-20:38:1:1:0:40 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:37:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 MTB_anc 1761789 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|mmpL6_Rv1557|gene1594|transcript|Transcript_gene1594|Coding|1/1|c.46C>G|p.Leu16Val|46/1194|46/1194|16/397||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1761789C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1761789C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:38:28:10:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:48:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:10:18:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:17:19:38:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:54:24:30:55:98.18%:99:4.0229E-32:0:0:0:0:56 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 1778789 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1571_Rv1571|gene1608|transcript|Transcript_gene1608|Coding|1/1|c.251G>T|p.Arg84Leu|251/510|251/510|84/169||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.1778789G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1778789G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:12:4:8:12:100%:64:3.698E-7:0:0:0:0:15 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:24:12:12:25:96%:99:2.0568E-13:38:1:1:0:25 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:16:6:10:17:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:24:12:12:25:96%:99:3.101E-14:0:0:0:0:25 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:61:31:30:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:34:5:29:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 1780586 . C CG . PASS AC=210;AF=0.905;AN=232;ANN=CG|frameshift_variant|HIGH|Rv1575_Rv1575|gene1611|transcript|Transcript_gene1611|Coding|1/1|c.389dupG|p.Val131fs|390/501|390/501|130/166||INFO_REALIGN_3_PRIME,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1780586_1780587insG||||||,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1780586_1780587insG||||||;LOF=(Rv1575_Rv1575|gene1611|1|1.00);WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:24:15:9:24:88.89%:99:2.0853E-12:31:3:3:0:28 1/1:41:18:13:5:19:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:34:44:23:21:38:97.78%:99:4.4304E-25:32:1:0:1:45 1/1:35:11:10:1:12:91.67%:53:4.8074E-6:37:1:1:0:12 ./. ./. 1/1:38:28:16:12:28:93.33%:99:4.194E-15:34:2:1:1:31 0/1:39:13:8:5:15:86.67%:60:8.7675E-7:33:2:2:0:15 1/1:39:17:11:6:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:13:10:3:12:100%:70:9.6148E-8:0:0:0:0:13 ./. 1/1:37:28:23:5:28:96.55%:99:9.9776E-16:31:1:0:1:29 1/1:39:15:10:5:16:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:37:27:19:8:28:90%:99:4.6134E-14:35:3:2:1:30 1/1:39:12:9:3:13:92.31%:58:1.3461E-6:37:1:1:0:13 1/1:36:19:16:3:19:95%:98:1.5234E-10:24:1:1:0:20 0/1:33:14:10:4:16:73.68%:60:8.0605E-7:42:4:4:0:18 0/1:36:20:15:5:22:83.33%:91:6.3493E-10:36:4:4:0:24 ./. 1/1:38:20:12:8:19:95.24%:99:4.0873E-11:39:1:1:0:21 1/1:36:18:15:3:18:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:35:39:29:10:38:97.5%:99:3.8137E-22:60:1:0:1:41 1/1:39:30:19:11:27:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:17:11:27:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:32:19:12:7:16:95%:98:1.5234E-10:37:1:1:0:20 ./. 1/1:36:14:10:4:12:100%:76:2.4927E-8:0:0:0:0:14 ./. 1/1:34:25:14:11:20:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:22:13:9:20:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:21:12:9:19:95.45%:99:1.0931E-11:33:1:1:0:22 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:20:12:8:20:90.91%:98:1.3117E-10:37:2:2:0:22 1/1:31:23:10:13:20:92%:99:2.7767E-12:54:2:2:0:25 1/1:34:24:13:11:23:96%:99:2.0568E-13:38:1:1:0:25 1/1:34:33:18:15:27:94.29%:99:5.9366E-18:37:2:2:0:35 1/1:37:47:30:17:42:97.92%:99:6.1512E-28:0:0:0:0:47 1/1:39:32:14:18:29:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:41:27:14:39:95.35%:99:1.4915E-22:46:2:1:1:43 1/1:27:26:13:13:18:92.86%:99:5.6872E-14:33:2:1:1:28 1/1:38:35:20:15:33:92.11%:99:1.5466E-18:33:3:1:2:38 1/1:33:20:13:7:18:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:22:18:4:19:100%:99:4.7526E-13:0:0:0:0:22 ./. 0/1:35:23:18:5:24:88.46%:99:7.3681E-12:42:3:2:1:26 1/1:40:18:14:4:19:94.74%:92:5.6585E-10:33:1:1:0:20 1/1:36:35:23:12:34:100%:99:8.9137E-21:0:0:0:0:36 0/1:34:26:17:9:28:89.66%:99:5.6872E-14:37:2:2:0:30 1/1:35:42:18:24:32:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:15:11:4:15:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:32:30:19:11:26:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:19:14:5:18:95%:98:1.5234E-10:37:1:1:0:20 1/1:32:11:8:3:9:91.67%:53:4.8074E-6:37:1:1:0:12 0/1:36:13:9:4:13:86.67%:60:8.7675E-7:34:2:1:1:15 1/1:36:35:24:11:34:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:33:34:21:13:28:100%:99:3.5146E-20:0:0:0:0:34 0/1:30:10:6:4:10:76.92%:42:5.3843E-5:34:3:2:1:13 1/1:35:22:17:5:21:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:37:28:14:14:25:93.33%:99:4.194E-15:36:2:2:0:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:31:17:9:8:13:94.44%:86:2.0936E-9:30:1:0:1:18 1/1:35:23:10:13:22:92%:99:2.7767E-12:37:2:2:0:25 ./. ./. ./. ./. ./. 1/1:40:23:13:10:22:100%:99:1.2146E-13:0:0:0:0:23 0/1:39:13:4:9:14:86.67%:60:8.7675E-7:36:2:2:0:15 1/1:33:31:10:21:24:100%:99:2.1486E-18:0:0:0:0:31 ./. 1/1:38:21:12:9:22:91.3%:99:1.0931E-11:25:1:1:0:23 ./. ./. 0/1:39:14:10:4:16:87.5%:69:1.0315E-7:34:1:0:1:16 1/1:36:20:12:8:18:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:28:14:14:26:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:28:16:8:8:10:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:34:28:14:14:27:93.33%:99:4.194E-15:35:2:2:0:30 1/1:34:24:16:8:20:100%:99:3.101E-14:0:0:0:0:24 ./. 1/1:39:22:16:6:21:95.65%:99:2.9149E-12:38:1:1:0:23 1/1:36:28:14:14:26:96.55%:99:9.9776E-16:37:1:1:0:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:27:20:7:26:100%:99:5.1363E-16:0:0:0:0:27 0/1:35:15:10:5:15:88.24%:71:7.3277E-8:33:2:0:2:17 1/1:35:19:9:10:16:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:26:13:13:26:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:39:35:18:17:28:100%:99:8.9137E-21:0:0:0:0:35 ./. 1/1:39:20:8:12:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:32:24:8:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:24:10:14:21:96%:99:2.0568E-13:24:1:1:0:25 1/1:38:43:20:23:38:97.73%:99:1.7144E-24:32:1:0:1:44 1/1:40:27:14:13:27:90%:99:4.6134E-14:34:3:1:2:30 0/1:35:21:16:5:22:87.5%:99:9.0704E-11:34:3:2:1:24 1/1:35:21:8:13:19:95.45%:99:1.0931E-11:32:1:1:0:22 ./. 1/1:35:19:14:5:18:90.48%:93:4.7003E-10:37:2:2:0:22 1/1:34:23:10:13:20:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:23:11:12:20:92%:99:2.7767E-12:33:2:2:0:25 ./. 0/1:34:10:7:3:11:83.33%:44:3.3652E-5:35:2:2:0:12 1/1:38:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:27:20:7:27:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:35:16:9:7:14:100%:87:1.6637E-9:0:0:0:0:16 1/1:33:19:9:10:13:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:29:18:11:27:100%:99:3.3259E-17:0:0:0:0:29 0/1:34:26:14:12:23:89.66%:99:1.6496E-13:45:3:3:0:29 1/1:36:30:22:8:32:90.91%:99:9.89E-16:34:3:1:2:33 1/1:33:23:12:11:19:100%:99:1.2146E-13:0:0:0:0:23 1/1:33:12:10:2:10:100%:64:3.698E-7:0:0:0:0:12 1/1:35:29:16:13:27:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:37:20:14:6:20:95.24%:99:4.0873E-11:36:1:1:0:21 1/1:35:31:20:11:29:100%:99:2.1486E-18:0:0:0:0:31 0/1:37:15:10:5:17:88.24%:71:7.3277E-8:37:2:2:0:17 ./. 1/1:37:14:13:1:14:93.33%:69:1.0315E-7:33:1:1:0:15 1/1:37:49:29:20:47:96.08%:99:3.4484E-27:38:2:2:0:52 ./. 0/1:34:15:11:4:16:83.33%:75:2.8282E-8:34:1:0:1:18 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 ./. 1/1:37:18:14:4:18:94.74%:92:5.6585E-10:37:1:1:0:19 0/1:37:31:26:5:36:86.11%:99:1.6935E-15:37:5:5:0:36 0/1:38:19:15:4:22:86.36%:89:1.0931E-9:36:3:3:0:22 1/1:36:33:26:7:32:100%:99:1.3852E-19:0:0:0:0:34 1/1:35:21:15:6:21:91.3%:99:3.6437E-11:33:2:0:2:23 0/1:35:20:13:7:24:76.92%:87:1.8273E-9:34:6:6:0:26 0/1:36:19:14:5:23:79.17%:84:3.6826E-9:34:5:5:0:24 ./. 0/1:37:11:6:5:14:78.57%:47:1.6951E-5:36:3:2:1:14 ./. ./. ./. 1/1:38:30:26:4:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:29:16:13:31:90.62%:99:3.5714E-15:32:3:2:1:32 1/1:36:21:16:5:20:100%:99:1.8578E-12:0:0:0:0:21 ./. ./. 1/1:36:20:9:11:18:100%:99:7.2544E-12:0:0:0:0:20 ./. 1/1:32:18:9:9:15:94.74%:92:5.6585E-10:37:1:1:0:20 1/1:33:25:14:11:24:92.59%:99:2.0853E-13:31:2:2:0:27 1/1:32:20:9:11:15:100%:99:7.2544E-12:0:0:0:0:20 ./. ./. 0/1:38:23:19:4:28:82.14%:99:3.103E-11:34:5:3:2:28 1/1:34:20:15:5:19:90.91%:98:1.3117E-10:34:2:1:1:22 MTB_anc 1780800 . A C . PASS AC=232;AF=1.00;AN=232;ANN=C|missense_variant|MODERATE|Rv1576c_Rv1576c|gene1612|transcript|Transcript_gene1612|Coding|1/1|c.1265T>G|p.Val422Gly|1265/1422|1265/1422|422/473||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1780800A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1780800A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 ./. ./. 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 ./. 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:49:20:29:49:100%:99:3.925E-29:0:0:0:0:52 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 ./. 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 ./. 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 ./. 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 ./. 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:53:38:15:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:40:20:20:41:97.56%:99:9.8874E-23:37:1:1:0:43 1/1:40:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 ./. 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 ./. 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 ./. ./. ./. ./. ./. 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 ./. 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 ./. ./. 1/1:40:24:16:8:25:96%:99:3.101E-14:0:0:0:0:25 1/1:40:27:10:17:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 ./. 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 ./. 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 ./. 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 ./. 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 ./. 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 ./. 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 ./. 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 ./. 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:36:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 ./. 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 ./. ./. ./. 1/1:39:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 ./. ./. 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 ./. 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 ./. ./. 1/1:38:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 1782897 . A G . PASS AC=2;AF=8.621e-03;AN=232;ANN=G|missense_variant|MODERATE|Rv1578c_Rv1578c|gene1614|transcript|Transcript_gene1614|Coding|1/1|c.332T>C|p.Val111Ala|332/471|332/471|111/156||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1782897A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1782897A>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:38:42:24:18:44 0/0:0:0:0:0:7:0%:14:1E0:42:7:4:3:7 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:47 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 0/0:0:0:0:0:31:0%:59:1E0:36:31:13:18:32 0/0:0:0:0:0:27:0%:52:1E0:39:27:18:9:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:28 ./. 0/0:0:0:0:0:39:0%:74:1E0:38:39:24:15:42 0/0:0:0:0:0:11:0%:22:1E0:40:11:4:7:12 0/0:0:0:0:0:54:0%:99:1E0:38:54:24:30:56 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:24 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:27 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:20 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:18 ./. 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:25:0%:48:1E0:36:25:14:11:27 0/0:0:0:0:0:47:0%:89:1E0:39:47:21:26:49 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:20 0/0:0:0:0:0:33:0%:63:1E0:37:33:21:12:35 0/0:0:0:0:0:40:0%:74:1E0:37:40:23:17:41 ./. 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:38 ./. 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:34 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:31 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:38 0/0:0:0:0:0:54:0%:99:1E0:40:54:25:29:56 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:50 0/0:0:0:0:0:33:0%:63:1E0:38:33:20:13:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:20:27:48 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:33 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:22 ./. 0/0:0:0:0:0:40:0%:74:1E0:37:40:21:19:46 0/0:0:0:0:0:33:0%:63:1E0:39:33:22:11:35 0/0:0:0:0:0:46:0%:85:1E0:39:46:28:18:50 0/0:0:0:0:0:44:0%:81:1E0:38:44:22:22:46 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:28 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:23 0/0:0:0:0:0:41:0%:78:1E0:35:41:19:22:43 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:30 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:35 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:46 0/0:0:0:0:0:42:0%:77:1E0:38:42:28:14:45 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:29 0/0:0:0:0:0:43:0%:82:1E0:37:43:30:13:45 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:30 ./. 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:29 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:43 ./. ./. ./. ./. ./. 0/0:0:0:0:0:18:0%:32:1E0:40:18:6:12:18 0/0:0:0:0:0:19:0%:37:1E0:43:19:5:14:20 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:32 ./. 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:21 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:36:0%:66:1E0:39:36:22:14:37 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:36 0/0:0:0:0:0:31:0%:59:1E0:37:31:17:14:33 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:36 ./. 0/0:0:0:0:0:32:0%:59:1E0:37:32:20:12:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:32 ./. 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:31 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:18 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 ./. 0/0:0:0:0:0:13:0%:25:1E0:43:13:8:5:16 0/0:0:0:0:0:36:0%:66:1E0:37:36:22:14:37 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:25 0/0:0:0:0:0:44:0%:81:1E0:38:44:27:17:46 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:24 0/0:0:0:0:0:29:0%:55:1E0:39:29:21:8:33 0/0:0:0:0:0:41:0%:78:1E0:38:41:29:12:43 ./. 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:39:36:23:13:37 ./. 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:16:0%:29:1E0:37:16:11:5:18 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:36 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:29 0/0:0:0:0:0:45:0%:85:1E0:39:45:31:14:47 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:33 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:38 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:26 0/0:0:0:0:0:23:0%:44:1E0:36:23:16:7:26 0/0:0:0:0:0:41:0%:78:1E0:38:41:24:17:42 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:36 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:44 0/0:0:0:0:0:37:0%:70:1E0:35:37:22:15:37 ./. 0/0:0:0:0:0:29:0%:55:1E0:37:29:19:10:30 0/0:0:0:0:0:58:0%:99:1E0:38:58:31:27:62 ./. 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:29 0/0:0:0:0:0:23:0%:44:1E0:34:23:16:7:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:33:0%:63:1E0:36:33:22:11:33 0/0:0:0:0:0:37:0%:70:1E0:37:37:26:11:41 0/0:0:0:0:0:33:0%:63:1E0:35:33:24:9:35 0/0:0:0:0:0:45:0%:85:1E0:36:45:26:19:54 0/0:0:0:0:0:32:0%:59:1E0:37:32:18:14:38 0/0:0:0:0:0:35:0%:67:1E0:37:35:20:15:36 0/0:0:0:0:0:30:0%:55:1E0:35:30:20:10:32 ./. 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:22 ./. ./. ./. 0/0:0:0:0:0:39:0%:74:1E0:38:39:24:15:43 0/0:0:0:0:0:37:0%:70:1E0:35:37:27:10:38 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:34 ./. ./. 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:16 ./. 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:36 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:21 0/0:0:0:0:0:16:0%:29:1E0:39:16:11:5:17 ./. ./. 0/0:0:0:0:0:43:0%:82:1E0:37:43:24:19:46 0/0:0:0:0:0:28:0%:51:1E0:37:28:18:10:30 MTB_anc 1788799 . T G . PASS AC=76;AF=1.00;AN=76;ANN=G|missense_variant|MODERATE|Rv1587c_Rv1587c|gene1623|transcript|Transcript_gene1623|Coding|1/1|c.365A>C|p.Lys122Thr|365/1002|365/1002|122/333||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1788799T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1788799T>G||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./. ./. ./. ./. ./. 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./. 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. 1/1:36:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 MTB_anc 1789446 . T C . PASS AC=116;AF=1.00;AN=116;ANN=C|missense_variant|MODERATE|Rv1588c_Rv1588c|gene1624|transcript|Transcript_gene1624|Coding|1/1|c.391A>G|p.Ile131Val|391/669|391/669|131/222||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1789446T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1789446T>C||||||;HET=0;WT=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 1789516 . G A . PASS AC=186;AF=1.00;AN=186;ANN=A|synonymous_variant|LOW|Rv1588c_Rv1588c|gene1624|transcript|Transcript_gene1624|Coding|1/1|c.321C>T|p.Gly107Gly|321/669|321/669|107/222||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1789516G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.1789516G>A||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:37:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:9:8:1:10:90%:42:5.9538E-5:38:1:1:0:10 1/1:38:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 MTB_anc 1792003 . C G . PASS AC=288;AF=1.00;AN=288;ANN=G|missense_variant|MODERATE|Rv1591_Rv1591|gene1627|transcript|Transcript_gene1627|Coding|1/1|c.434C>G|p.Ser145Cys|434/666|434/666|145/221||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1792003C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1792003C>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:13:8:5:14:92.86%:64:3.7391E-7:37:1:0:1:18 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:16 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:15 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:37:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:38 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:36:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:35:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:30 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:45:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:20:12:8:21:95.24%:99:7.2544E-12:0:0:0:0:25 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:42:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:36:24:15:9:24:100%:99:3.101E-14:0:0:0:0:27 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:14:6:8:15:93.33%:76:2.4927E-8:0:0:0:0:16 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:33 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:15 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:28 1/1:36:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:32 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:34:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:20 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:23 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:35:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:14 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 MTB_anc 1797198 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|nadB_Rv1595|gene1631|transcript|Transcript_gene1631|Coding|1/1|c.1394T>G|p.Phe465Cys|1394/1584|1394/1584|465/527||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1797198T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1797198T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:44:52:31:21:55 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:51 0/0:0:0:0:0:20:0%:36:1E0:50:20:13:7:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:35 0/0:0:0:0:0:12:0%:21:1E0:42:12:6:6:12 0/0:0:0:0:0:49:0%:93:1E0:46:49:24:25:50 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:48:0%:89:1E0:46:48:29:19:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:18:6:25 0/0:0:0:0:0:42:0%:77:1E0:43:42:14:28:45 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:28 0/0:0:0:0:0:15:0%:29:1E0:49:15:6:9:15 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:23:9:33 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:54:0%:99:1E0:44:54:26:28:54 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:51:0%:97:1E0:46:51:24:27:52 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:44:0%:81:1E0:40:44:24:20:45 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:39 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:44 0/0:0:0:0:0:23:0%:44:1E0:48:23:7:16:23 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:55 0/0:0:0:0:0:21:0%:40:1E0:46:21:15:6:21 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:24 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:52:0%:96:1E0:45:52:31:21:52 0/0:0:0:0:0:33:0%:63:1E0:49:33:18:15:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:28 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:17 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:54:0%:99:1E0:42:54:25:29:56 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:34 0/0:0:0:0:0:60:0%:99:1E0:45:60:36:24:60 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:22 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:46:0%:85:1E0:48:46:28:18:47 0/0:0:0:0:0:54:0%:99:1E0:42:54:20:34:54 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:37 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:61:0%:99:1E0:43:61:31:30:62 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:39 0/0:0:0:0:0:23:0%:44:1E0:49:23:8:15:23 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:44 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:9 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:29 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:47 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:39 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:37:0%:70:1E0:46:37:27:10:38 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:21:0%:40:1E0:39:21:15:6:21 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:32 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:37 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:38 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:56:0%:99:1E0:44:56:34:22:57 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:16 0/0:0:0:0:0:50:0%:92:1E0:43:50:22:28:52 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:26 0/0:0:0:0:0:68:0%:99:1E0:41:68:37:31:69 0/1:36:8:6:2:33:24.24%:26:2.4173E-3:39:25:15:10:37 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:43 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:55:0%:99:1E0:38:55:24:31:56 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:15:6:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:49:0%:93:1E0:40:49:23:26:50 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:48 MTB_anc 1797378 . C A . PASS AC=68;AF=0.227;AN=300;ANN=A|missense_variant|MODERATE|nadB_Rv1595|gene1631|transcript|Transcript_gene1631|Coding|1/1|c.1574C>A|p.Ala525Glu|1574/1584|1574/1584|525/527||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1797378C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1797378C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:43 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:21 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:24 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:37:1:1:0:28:3.57%:41:5E-1:45:27:11:16:28 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:20:6:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:50:0%:92:1E0:41:50:33:17:52 0/0:0:0:0:0:18:0%:32:1E0:43:18:12:6:19 0/0:38:1:1:0:38:2.63%:58:5E-1:42:37:19:18:38 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:27:14:13:28:96.43%:99:3.7915E-15:38:1:1:0:29 0/0:37:1:0:1:26:3.85%:38:5E-1:48:25:10:15:26 0/0:0:0:0:0:30:0%:55:1E0:40:30:21:9:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:45:0%:85:1E0:41:45:30:15:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:20:9:30 0/0:0:0:0:0:17:0%:33:1E0:44:17:11:6:17 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:39:0%:74:1E0:39:39:26:13:39 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:41:0%:78:1E0:40:41:28:13:42 0/0:0:0:0:0:50:0%:92:1E0:44:50:28:22:51 0/0:0:0:0:0:59:0%:99:1E0:42:59:35:24:61 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:43:0%:82:1E0:45:43:27:16:45 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:44 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:44 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:39 0/0:0:0:0:0:54:0%:99:1E0:40:54:28:26:54 0/0:0:0:0:0:43:0%:82:1E0:45:43:25:18:47 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:25 0/0:38:2:1:1:54:3.7%:77:2.4766E-1:40:52:30:22:57 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:22 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:43 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:27:11:38 1/1:43:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:47:0%:89:1E0:38:47:31:16:49 0/0:0:0:0:0:44:0%:81:1E0:45:44:29:15:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:0:0:0:0:55:0%:99:1E0:45:55:32:23:56 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:54:0%:99:1E0:41:54:35:19:54 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:33 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:42:0%:77:1E0:51:42:24:18:44 0/0:0:0:0:0:53:0%:99:1E0:41:53:32:21:53 0/0:0:0:0:0:25:0%:48:1E0:45:25:18:7:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:47:0%:89:1E0:45:47:32:15:48 1/1:42:37:19:18:39:94.87%:99:3.0128E-20:47:2:1:1:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:40 0/0:0:0:0:0:63:0%:99:1E0:41:63:41:22:65 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:30 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:16:0%:29:1E0:43:16:9:7:16 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:43 0/0:37:1:1:0:28:3.57%:41:5E-1:44:27:15:12:28 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:16 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:25 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:43 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:29 0/0:0:0:0:0:27:0%:52:1E0:38:27:18:9:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:33 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:49 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:28 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:18 0/0:0:0:0:0:37:0%:70:1E0:38:37:26:11:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:54:0%:99:1E0:42:54:24:30:56 0/0:38:1:0:1:32:3.12%:48:5E-1:41:31:20:11:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:42 0/0:0:0:0:0:44:0%:81:1E0:43:44:27:17:44 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:34 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:22 0/0:0:0:0:0:42:0%:77:1E0:38:42:19:23:42 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:49:29:20:49:100%:99:3.925E-29:0:0:0:0:52 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:31 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:36 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:34 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:45:0%:85:1E0:40:45:18:27:46 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:44 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 1/1:43:28:16:12:29:96.55%:99:9.9776E-16:37:1:1:0:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:30:11:42 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:49 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:48 MTB_anc 1797577 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|nadC_Rv1596|gene1632|transcript|Transcript_gene1632|Coding|1/1|c.190G>A|p.Asp64Asn|190/858|190/858|64/285||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1797577G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1797577G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:64:22:42:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:48:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:49:14:35:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:41:8:33:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:47:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:40:10:30:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:44:8:36:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:13:14:28:96.43%:99:3.7915E-15:32:1:0:1:31 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:37:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 1798715 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1597_Rv1597|gene1633|transcript|Transcript_gene1633|Coding|1/1|c.422C>T|p.Ala141Val|422/759|422/759|141/252||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1798715C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1798715C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:54:18:36:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:52:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:61:27:34:61:100%:99:2.609E-36:0:0:0:0:64 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:11:16:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:73:44:29:73:100%:99:1.7006E-43:0:0:0:0:74 1/1:47:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:54:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:45:27:18:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:41 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:52:27:25:53:98.11%:99:8.609E-30:38:1:1:0:53 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 MTB_anc 1800921 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|hisC1_Rv1600|gene1636|transcript|Transcript_gene1636|Coding|1/1|c.26C>T|p.Thr9Ile|26/1143|26/1143|9/380||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1800921C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1800921C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:51:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:19:13:6:20:95%:98:1.5234E-10:37:1:0:1:22 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:31:18:13:32:96.88%:99:1.8007E-17:37:1:0:1:32 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 1821550 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|cydC_Rv1620c|gene1656|transcript|Transcript_gene1656|Coding|1/1|c.144G>T|p.Val48Val|144/1731|144/1731|48/576||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1821550C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1821550C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:51:13:38:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:49:13:36:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:44:23:21:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:29 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:35:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:49:19:30:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 MTB_anc 1823618 . T G . PASS AC=4;AF=0.013;AN=300;ANN=G|synonymous_variant|LOW|cydB_Rv1622c|gene1658|transcript|Transcript_gene1658|Coding|1/1|c.783A>C|p.Ile261Ile|783/1041|783/1041|261/346||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1823618T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1823618T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:35:0%:67:1E0:38:35:25:10:36 0/0:0:0:0:0:21:0%:40:1E0:40:21:17:4:21 0/0:0:0:0:0:51:0%:97:1E0:40:51:35:16:53 0/0:0:0:0:0:20:0%:36:1E0:40:20:15:5:20 0/0:0:0:0:0:22:0%:40:1E0:38:22:19:3:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:17:0%:33:1E0:35:17:14:3:17 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:29 0/0:0:0:0:0:34:0%:62:1E0:38:34:25:9:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:33:0%:63:1E0:38:33:25:8:34 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:21 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:0:0:0:0:25:0%:48:1E0:37:25:16:9:25 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:20:0%:36:1E0:37:20:14:6:22 0/0:0:0:0:0:36:0%:66:1E0:37:36:24:12:37 0/0:0:0:0:0:21:0%:40:1E0:42:21:16:5:21 0/0:0:0:0:0:40:0%:74:1E0:40:40:28:12:42 0/0:0:0:0:0:23:0%:44:1E0:39:23:17:6:23 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:24 0/0:0:0:0:0:14:0%:25:1E0:40:14:9:5:15 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:41:24:19:5:26 0/0:0:0:0:0:19:0%:37:1E0:38:19:14:5:20 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:30 0/0:0:0:0:0:16:0%:29:1E0:39:16:11:5:17 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:35 0/0:0:0:0:0:27:0%:52:1E0:39:27:19:8:27 0/0:0:0:0:0:33:0%:63:1E0:40:33:24:9:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:0:0:0:0:19:0%:37:1E0:36:19:13:6:19 0/0:0:0:0:0:60:0%:99:1E0:40:60:42:18:61 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:37 0/0:0:0:0:0:36:0%:66:1E0:39:36:25:11:36 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:22 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:32 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:18:5:26 0/0:0:0:0:0:24:0%:44:1E0:38:24:15:9:24 0/0:0:0:0:0:19:0%:37:1E0:37:19:14:5:20 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:24 0/0:0:0:0:0:36:0%:66:1E0:38:36:19:17:36 0/0:0:0:0:0:31:0%:59:1E0:38:31:21:10:33 0/0:0:0:0:0:46:0%:85:1E0:40:46:31:15:47 0/0:0:0:0:0:21:0%:40:1E0:40:21:15:6:21 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:20 0/0:0:0:0:0:29:0%:55:1E0:37:29:18:11:29 0/0:0:0:0:0:16:0%:29:1E0:35:16:12:4:17 0/0:0:0:0:0:39:0%:74:1E0:38:39:27:12:40 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:20 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:31 0/0:0:0:0:0:43:0%:82:1E0:40:43:23:20:43 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:39:0%:74:1E0:38:39:28:11:40 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:35 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:21 0/0:0:0:0:0:28:0%:51:1E0:40:28:21:7:28 0/0:0:0:0:0:55:0%:99:1E0:40:55:39:16:57 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:21 0/0:0:0:0:0:47:0%:89:1E0:39:47:30:17:48 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:17 0/0:0:0:0:0:26:0%:47:1E0:38:26:20:6:26 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:28 0/0:0:0:0:0:19:0%:37:1E0:37:19:16:3:20 0/0:0:0:0:0:22:0%:40:1E0:38:22:15:7:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:14:5:20 0/0:0:0:0:0:13:0%:25:1E0:39:13:9:4:13 0/0:0:0:0:0:32:0%:59:1E0:37:32:24:8:36 0/0:0:0:0:0:32:0%:59:1E0:37:32:20:12:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:30 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:21 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:37:36:27:9:37 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:39:27:19:8:28 0/0:0:0:0:0:36:0%:66:1E0:38:36:30:6:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:27 0/0:0:0:0:0:35:0%:67:1E0:36:35:25:10:35 0/0:0:0:0:0:32:0%:59:1E0:37:32:26:6:34 0/0:0:0:0:0:48:0%:89:1E0:37:48:33:15:48 0/0:0:0:0:0:17:0%:33:1E0:41:17:12:5:17 0/0:0:0:0:0:26:0%:47:1E0:36:26:18:8:26 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:39:0%:74:1E0:38:39:29:10:39 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:23 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:17 0/0:0:0:0:0:26:0%:47:1E0:36:26:15:11:26 0/0:0:0:0:0:39:0%:74:1E0:37:39:25:14:40 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:23 0/0:0:0:0:0:18:0%:32:1E0:36:18:13:5:18 0/0:0:0:0:0:28:0%:51:1E0:39:28:22:6:28 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:34 0/0:0:0:0:0:24:0%:44:1E0:37:24:20:4:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:30 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:33 0/0:0:0:0:0:37:0%:70:1E0:40:37:24:13:38 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:26 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:19 0/0:0:0:0:0:28:0%:51:1E0:37:28:20:8:28 0/0:0:0:0:0:21:0%:40:1E0:35:21:14:7:21 0/0:0:0:0:0:32:0%:59:1E0:39:32:23:9:33 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:24 0/0:0:0:0:0:27:0%:52:1E0:37:27:22:5:28 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:36:0%:66:1E0:38:36:27:9:39 0/0:0:0:0:0:20:0%:36:1E0:38:20:16:4:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:14:8:23 0/0:0:0:0:0:32:0%:59:1E0:37:32:26:6:35 0/0:0:0:0:0:19:0%:37:1E0:36:19:10:9:20 0/0:0:0:0:0:28:0%:51:1E0:37:28:18:10:33 0/0:0:0:0:0:27:0%:52:1E0:36:27:17:10:27 0/0:0:0:0:0:31:0%:59:1E0:36:31:20:11:31 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:27 0/0:0:0:0:0:27:0%:52:1E0:39:27:19:8:29 0/0:0:0:0:0:26:0%:47:1E0:36:26:19:7:29 0/0:0:0:0:0:45:0%:85:1E0:37:45:31:14:45 0/0:0:0:0:0:25:0%:48:1E0:38:25:20:5:26 0/0:0:0:0:0:34:0%:62:1E0:37:34:26:8:35 0/0:0:0:0:0:20:0%:36:1E0:35:20:14:6:20 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:42:0%:77:1E0:36:42:34:8:43 0/0:0:0:0:0:27:0%:52:1E0:37:27:20:7:28 0/0:0:0:0:0:31:0%:59:1E0:37:31:25:6:31 0/0:0:0:0:0:40:0%:74:1E0:37:40:33:7:41 0/0:0:0:0:0:24:0%:44:1E0:38:24:19:5:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:16:7:24 0/0:0:0:0:0:20:0%:36:1E0:39:20:17:3:21 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:37:35:20:15:35 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:24 0/0:0:0:0:0:38:0%:70:1E0:38:38:24:14:38 0/0:0:0:0:0:37:0%:70:1E0:38:37:29:8:37 0/0:0:0:0:0:51:0%:97:1E0:38:51:34:17:54 0/0:0:0:0:0:34:0%:62:1E0:39:34:25:9:35 MTB_anc 1826054 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1624c_Rv1624c|gene1660|transcript|Transcript_gene1660|Coding|1/1|c.532G>A|p.Ala178Thr|532/588|532/588|178/195||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1826054C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1826054C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:61:36:25:61:100%:99:2.609E-36:0:0:0:0:62 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:53:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:48:29:19:48:100%:99:1.554E-28:0:0:0:0:53 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:48:19:29:48:100%:99:1.554E-28:0:0:0:0:52 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:60 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 1833314 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|polA_Rv1629|gene1666|transcript|Transcript_gene1666|Coding|1/1|c.2650C>T|p.Pro884Ser|2650/2715|2650/2715|884/904||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.1833314C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1833314C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:43:42:28:14:42 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:32 0/0:0:0:0:0:37:0%:70:1E0:50:37:20:17:37 0/0:0:0:0:0:13:0%:25:1E0:48:13:6:7:13 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:44 0/0:0:0:0:0:11:0%:22:1E0:48:11:8:3:12 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:53 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:49 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:23:0%:44:1E0:45:23:7:16:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:29 0/0:0:0:0:0:19:0%:37:1E0:50:19:12:7:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:41 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:60:0%:99:1E0:46:60:29:31:61 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:40 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:46:0%:85:1E0:42:46:29:17:46 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:51:0%:97:1E0:42:51:22:29:51 0/0:0:0:0:0:45:0%:85:1E0:47:45:19:26:45 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:37 0/0:0:0:0:0:56:0%:99:1E0:42:56:27:29:57 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:40:0%:74:1E0:48:40:15:25:41 0/0:0:0:0:0:22:0%:40:1E0:51:22:7:15:22 0/0:0:0:0:0:52:0%:96:1E0:46:52:30:22:53 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:52:0%:96:1E0:44:52:25:27:53 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:34:0%:62:1E0:51:34:17:17:35 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:47:0%:89:1E0:43:47:15:32:48 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:50:38:22:16:39 0/0:0:0:0:0:65:0%:99:1E0:46:65:30:35:65 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:17 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:22 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:31:0%:59:1E0:50:31:19:12:31 0/0:0:0:0:0:12:0%:21:1E0:49:12:6:6:12 0/0:0:0:0:0:32:0%:59:1E0:49:32:10:22:33 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:52 0/0:0:0:0:0:20:0%:36:1E0:41:20:6:14:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:16:8:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:47 0/0:0:0:0:0:39:0%:74:1E0:49:39:16:23:39 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:38 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:24 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:35 0/0:0:0:0:0:25:0%:48:1E0:51:25:14:11:25 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:44 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:47:0%:89:1E0:46:47:24:23:48 0/0:0:0:0:0:18:0%:32:1E0:40:18:14:4:19 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:33 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:32:0%:59:1E0:48:32:23:9:32 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 0/0:20:1:1:0:59:1.69%:98:5E-1:42:58:26:32:59 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/0:0:0:0:0:51:0%:97:1E0:39:51:26:25:52 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:44 0/0:0:0:0:0:53:0%:99:1E0:40:53:29:24:55 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:35 0/0:0:0:0:0:39:0%:74:1E0:37:39:17:22:40 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:46 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:45 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:58:0%:99:1E0:41:58:35:23:58 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:44 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:42 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:54:0%:99:1E0:40:54:29:25:57 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:35:1:0:1:35:2.86%:55:5E-1:42:34:16:18:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:23:9:32 0/0:0:0:0:0:45:0%:85:1E0:46:45:28:17:46 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:57 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 MTB_anc 1837767 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|synonymous_variant|LOW|uvrB_Rv1633|gene1670|transcript|Transcript_gene1670|Coding|1/1|c.693G>A|p.Leu231Leu|693/2097|693/2097|231/698||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1837767G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1837767G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:56:0%:99:1E0:44:56:31:25:59 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:18 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 1/1:40:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:17 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:25:0%:48:1E0:48:25:17:8:25 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:24 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 1/1:46:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:50:0%:92:1E0:41:50:29:21:50 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:31 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:17 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:22 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:22 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:26 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:34 0/0:60:1:0:1:51:1.96%:84:5E-1:42:50:28:22:51 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:20 1/1:52:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 1/1:47:18:9:9:19:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:37:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:24:9:34 1/1:39:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:46 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:41:0%:78:1E0:47:41:28:13:41 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 1/1:49:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:26:13:13:28:92.86%:99:5.6872E-14:37:2:0:2:28 1/1:42:47:32:15:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:15 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:21:0%:40:1E0:43:21:15:6:22 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:37:0%:70:1E0:41:37:28:9:40 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:33 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:20 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:39 0/0:0:0:0:0:25:0%:48:1E0:36:25:12:13:26 0/0:0:0:0:0:45:0%:85:1E0:42:45:30:15:46 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:23 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:51 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:43 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:44:0%:81:1E0:38:44:21:23:47 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:41 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:45 0/0:0:0:0:0:33:0%:63:1E0:36:33:13:20:34 0/0:0:0:0:0:48:0%:89:1E0:38:48:32:16:48 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:35 0/0:38:1:1:0:49:2.04%:80:5E-1:41:48:22:26:51 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:28 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:40 0/0:0:0:0:0:38:0%:70:1E0:37:38:20:18:39 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:43 0/0:0:0:0:0:32:0%:59:1E0:37:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:30 1/1:41:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:40:0%:74:1E0:38:40:25:15:40 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:24 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:16 0/0:0:0:0:0:26:0%:47:1E0:43:26:20:6:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 1839260 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv1634_Rv1634|gene1671|transcript|Transcript_gene1671|Coding|1/1|c.93G>T|p.Leu31Leu|93/1416|93/1416|31/471||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1839260G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1839260G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:53:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:54:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:53:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 MTB_anc 1839759 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1634_Rv1634|gene1671|transcript|Transcript_gene1671|Coding|1/1|c.592C>G|p.Arg198Gly|592/1416|592/1416|198/471||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.1839759C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1839759C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:36:14:22:37:97.3%:99:2.1762E-20:37:1:0:1:38 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:21:8:13:22:100%:99:1.8578E-12:0:0:0:0:26 1/1:46:21:11:10:24:91.3%:99:3.6437E-11:33:2:1:1:24 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:20:11:32:96.88%:99:1.8007E-17:38:1:1:0:32 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:32:17:15:33:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:33:18:15:35:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:16:17:34:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:28:12:16:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:42:17:25:43:97.67%:99:5.9562E-25:0:0:0:0:44 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:57:37:20:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:19:13:33:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:28:15:13:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:66:35:31:67:100%:99:2.6498E-39:0:0:0:0:67 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:52:29:23:53:100%:99:6.3169E-31:0:0:0:0:53 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:14:5:9:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:45:40:21:19:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:49:18:8:10:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:19:8:11:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:52:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:42:23:19:43:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:35:14:21:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:35:17:18:36:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:17:21:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:28:17:11:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:23:12:11:24:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:51:33:18:52:98.08%:99:2.5024E-30:0:0:0:0:53 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:21:15:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:18:16:35:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:47:23:24:49:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 1843477 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv1637c_Rv1637c|gene1674|transcript|Transcript_gene1674|Coding|1/1|c.216C>T|p.Gly72Gly|216/795|216/795|72/264||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1843477G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1843477G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:48 0/0:0:0:0:0:14:0%:25:1E0:52:14:10:4:14 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:37:1:1:0:35:2.86%:55:5E-1:45:34:20:14:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 0/0:0:0:0:0:14:0%:25:1E0:51:14:5:9:15 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:55 0/0:0:0:0:0:22:0%:40:1E0:39:22:6:16:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:43 0/0:0:0:0:0:19:0%:37:1E0:52:19:11:8:20 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:26:0%:47:1E0:50:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:43 0/0:0:0:0:0:19:0%:37:1E0:51:19:6:13:19 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:41 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:17 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:18:8:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:36:0%:66:1E0:50:36:18:18:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:27 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 0/0:0:0:0:0:52:0%:96:1E0:47:52:23:29:54 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:49 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:19 0/0:38:1:0:1:26:3.85%:38:5E-1:42:25:7:18:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:47 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:43 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:60:1:1:0:28:3.57%:41:5E-1:46:27:8:19:30 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:21 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:32 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:15:26:42 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:20:0%:36:1E0:46:20:7:13:22 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:41 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:50 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:15 0/0:38:1:1:0:30:3.33%:44:5E-1:42:29:14:15:31 0/0:0:0:0:0:38:0%:70:1E0:49:38:19:19:38 0/1:51:22:12:10:36:61.11%:86:2.1194E-9:52:14:6:8:36 0/0:0:0:0:0:28:0%:51:1E0:48:28:8:20:28 0/0:0:0:0:0:33:0%:63:1E0:50:33:15:18:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:29 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:31 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:25 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:24 0/0:0:0:0:0:21:0%:40:1E0:40:21:16:5:21 0/0:60:1:0:1:50:2%:80:5E-1:46:48:22:26:50 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:43 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:31 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:51 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:19 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:42 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:18 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:30 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:30 0/0:0:0:0:0:40:0%:74:1E0:38:40:22:18:42 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:39 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:19 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:54 0/0:0:0:0:0:52:0%:96:1E0:41:52:30:22:54 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:22 0/0:0:0:0:0:47:0%:89:1E0:40:47:20:27:50 0/0:0:0:0:0:28:0%:51:1E0:38:28:20:8:33 0/0:0:0:0:0:48:0%:89:1E0:39:48:30:18:49 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:42 0/0:0:0:0:0:42:0%:77:1E0:39:42:20:22:42 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:41 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:50 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:38 0/0:0:0:0:0:40:0%:74:1E0:36:40:22:18:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:43 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:45:0%:85:1E0:37:45:25:20:46 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:31 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:48 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:32 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:20 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:50 0/0:0:0:0:0:33:0%:63:1E0:39:33:11:22:37 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:21 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:50:0%:92:1E0:42:50:21:29:53 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:35 MTB_anc 1843570 . T TGTCATATGCGCCACTGCTCCTATGCCGGCTGCGCCGGCATCATCGTCGTTGGCGCGG . PASS AC=24;AF=0.080;AN=300;ANN=TGTCATATGCGCCACTGCTCCTATGCCGGCTGCGCCGGCATCATCGTCGTTGGCGCGG|disruptive_inframe_insertion|MODERATE|Rv1637c_Rv1637c|gene1674|transcript|Transcript_gene1674|Coding|1/1|c.66_122dupCCGCGCCAACGACGATGATGCCGGCGCAGCCGGCATAGGAGCAGTGGCGCATATGAC|p.Thr41_Thr42insArgAlaAsnAspAspAspAlaGlyAlaAlaGlyIleGlyAlaValAlaHisMetThr|122/795|122/795|41/264||,TGTCATATGCGCCACTGCTCCTATGCCGGCTGCGCCGGCATCATCGTCGTTGGCGCGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1843570_1843571insGTCATATGCGCCACTGCTCCTATGCCGGCTGCGCCGGCATCATCGTCGTTGGCGCGG||||||,TGTCATATGCGCCACTGCTCCTATGCCGGCTGCGCCGGCATCATCGTCGTTGGCGCGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1843570_1843571insGTCATATGCGCCACTGCTCCTATGCCGGCTGCGCCGGCATCATCGTCGTTGGCGCGG||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:49:10:4:6:35:28.57%:33:4.6276E-4:43:25:9:16:35 0/0:49:2:1:1:10:20%:7:2.3684E-1:54:8:6:2:11 0/1:48:7:2:5:33:21.21%:22:5.4855E-3:47:26:16:10:33 0/0:49:4:0:4:26:15.38%:18:5.461E-2:47:20:9:11:26 0/0:37:1:0:1:20:5%:27:5E-1:46:19:14:5:21 0/0:45:6:4:2:24:25%:11:1.0968E-2:46:18:9:9:25 0/0:38:1:1:0:22:4.55%:31:5E-1:51:21:9:12:22 0/0:46:3:1:2:24:12.5%:22:1.1702E-1:47:21:12:9:24 0/0:49:2:2:0:15:13.33%:16:2.4138E-1:47:13:8:5:15 0/0:49:4:3:1:24:16.67%:18:5.461E-2:47:20:11:9:24 0/1:47:7:3:4:28:25%:22:5.1054E-3:48:21:13:8:28 0/1:43:9:3:6:30:30%:30:9.678E-4:48:21:10:11:31 0/0:60:1:0:1:19:5.26%:28:5E-1:54:18:7:11:19 0/1:43:8:3:5:35:22.86%:26:2.4931E-3:47:27:15:12:36 0/0:49:4:2:2:15:26.67%:8:4.9808E-2:41:11:3:8:15 0/0:46:5:4:1:32:15.62%:24:2.6412E-2:47:27:12:15:32 0/0:45:3:1:2:14:21.43%:9:1.1111E-1:52:11:6:5:14 0/0:45:6:2:4:24:25%:11:1.0968E-2:50:18:11:7:24 0/0:46:3:2:1:21:14.29%:19:1.1585E-1:47:18:11:7:21 0/0:60:1:1:0:19:5.26%:28:5E-1:47:18:8:10:19 0/1:48:8:7:1:20:40%:27:1.638E-3:41:12:7:5:20 0/0:48:2:0:2:31:6.45%:40:2.459E-1:43:29:10:19:32 0/0:39:1:0:1:10:10%:11:5E-1:55:9:3:6:11 0/0:46:6:2:4:23:26.09%:9:1.057E-2:48:16:8:8:23 0/0:46:3:3:0:24:12.5%:22:1.1702E-1:41:21:10:11:24 0/0:39:1:0:1:11:9.09%:14:5E-1:50:10:6:4:11 0/1:49:7:2:5:26:26.92%:23:4.9169E-3:48:19:8:11:26 0/0:60:2:2:0:17:11.76%:18:2.4242E-1:43:15:10:5:17 0/0:46:3:0:3:19:15.79%:17:1.1486E-1:47:16:6:10:20 0/0:53:3:2:1:26:11.54%:25:1.1765E-1:44:23:10:13:27 0/0:43:4:1:3:19:21.05%:13:5.251E-2:42:15:6:9:19 0/0:49:2:2:0:16:12.5%:15:2.4194E-1:45:14:7:7:16 0/0:0:0:0:0:24:0%:44:1E0:53:24:11:13:24 0/0:43:4:2:2:25:16%:21:5.4928E-2:46:21:11:10:26 0/0:52:4:3:1:19:21.05%:10:5.1948E-2:50:14:4:10:19 0/0:47:5:3:2:22:22.73%:12:2.4248E-2:47:17:9:8:22 0/0:49:2:1:1:28:7.14%:34:2.4545E-1:43:26:17:9:28 0/0:45:3:2:1:39:7.69%:47:1.2013E-1:50:36:16:20:39 0/0:52:6:1:5:24:25%:11:1.0777E-2:42:17:8:9:24 0/1:47:10:7:3:38:26.32%:33:4.9525E-4:46:28:13:15:39 0/1:41:8:4:4:34:23.53%:26:2.4562E-3:42:26:11:15:34 0/0:38:4:2:2:29:13.79%:23:5.5746E-2:45:24:13:11:29 0/0:45:6:3:3:20:30%:7:1.0098E-2:43:14:5:9:20 0/0:49:2:0:2:17:11.76%:15:2.4194E-1:45:14:4:10:17 0/0:44:2:0:2:27:7.41%:34:2.4528E-1:44:25:14:11:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:49:4:2:2:22:18.18%:15:5.3471E-2:49:17:7:10:22 0/0:51:5:3:2:29:17.24%:22:2.5917E-2:41:24:12:12:30 0/1:44:10:5:5:30:33.33%:33:3.9851E-4:45:20:11:9:30 0/0:38:5:2:3:24:20.83%:14:2.4823E-2:53:19:7:12:25 0/0:49:2:1:1:18:11.11%:18:2.4242E-1:48:15:9:6:18 0/0:42:4:1:3:32:12.5%:29:5.6596E-2:43:28:16:12:33 0/0:0:0:0:0:16:0%:29:1E0:49:16:8:8:16 0/0:38:1:0:1:16:6.25%:21:5E-1:46:15:7:8:16 0/0:45:6:5:1:24:25%:11:1.0968E-2:47:18:10:8:24 0/0:44:3:3:0:33:9.09%:37:1.1923E-1:43:30:13:17:34 0/0:48:2:2:0:23:8.7%:28:2.4444E-1:43:21:14:7:23 0/0:53:3:1:2:22:13.64%:19:1.1628E-1:46:19:10:9:22 0/0:49:4:0:4:26:15.38%:20:5.5222E-2:42:22:10:12:26 0/0:49:6:3:3:24:25%:11:1.0968E-2:51:18:11:7:24 0/0:39:1:1:0:20:5%:27:5E-1:45:19:9:10:20 0/1:48:8:3:5:30:26.67%:26:2.2875E-3:43:22:8:14:30 0/1:48:8:6:2:30:26.67%:26:2.2875E-3:44:22:12:10:30 0/0:43:5:2:3:15:33.33%:6:2.1073E-2:50:10:5:5:15 0/0:43:5:4:1:31:16.13%:21:2.6093E-2:52:25:11:14:31 0/1:46:7:4:3:38:18.42%:22:5.6667E-3:48:29:14:15:38 0/1:44:7:3:4:17:41.18%:24:3.6151E-3:46:10:5:5:17 0/0:51:5:4:1:22:22.73%:10:2.3562E-2:47:15:7:8:23 0/0:0:0:0:0:16:0%:29:1E0:53:16:11:5:16 0/0:39:1:1:0:23:4.35%:34:5E-1:48:22:12:10:24 0/0:0:0:0:0:35:0%:67:1E0:50:35:22:13:35 0/0:43:4:1:3:32:12.5%:29:5.6596E-2:52:28:13:15:32 0/0:51:5:2:3:19:26.32%:10:2.3166E-2:50:14:3:11:19 0/0:49:4:1:3:28:14.29%:23:5.5746E-2:52:24:12:12:28 0/0:43:4:4:0:22:18.18%:15:5.3885E-2:46:18:10:8:22 0/0:37:1:1:0:20:5%:27:5E-1:50:19:8:11:20 0/0:41:4:2:2:21:19.05%:15:5.3471E-2:49:17:9:8:21 0/0:38:1:0:1:16:6.25%:21:5E-1:51:15:7:8:16 0/0:46:3:2:1:24:12.5%:22:1.1702E-1:45:21:11:10:24 0/0:42:6:3:3:25:24%:14:1.1145E-2:44:19:10:9:25 0/0:39:2:2:0:24:8.33%:28:2.4444E-1:44:21:11:10:24 0/0:38:5:5:0:26:19.23%:17:2.531E-2:44:21:9:12:26 0/0:42:3:1:2:20:15%:16:1.1538E-1:48:17:11:6:21 0/0:55:5:1:4:30:16.67%:21:2.6093E-2:47:25:11:14:30 0/0:60:1:1:0:20:5%:27:5E-1:47:19:9:10:20 0/0:42:4:2:2:16:25%:8:5.0612E-2:42:12:5:7:16 0/0:43:4:2:2:19:21.05%:13:5.251E-2:45:15:11:4:21 0/0:40:3:3:0:14:21.43%:9:1.1111E-1:47:11:8:3:14 0/0:48:2:1:1:33:6.06%:44:2.4615E-1:47:31:13:18:33 0/0:60:2:0:2:23:8.7%:28:2.4444E-1:46:21:10:11:23 0/0:39:6:1:5:26:23.08%:13:1.1309E-2:50:20:12:8:26 0/0:51:5:2:3:19:26.32%:10:2.3166E-2:48:14:8:6:19 0/0:47:5:3:2:38:13.16%:32:2.7169E-2:41:33:17:16:38 0/0:60:4:3:1:22:18.18%:15:5.3885E-2:48:18:8:10:22 0/1:45:10:7:3:36:27.78%:33:4.7404E-4:48:26:13:13:37 0/0:38:2:2:0:13:15.38%:13:2.4E-1:49:11:6:5:13 0/0:54:4:2:2:27:14.81%:23:5.5494E-2:43:23:9:14:28 0/1:50:7:4:3:30:23.33%:22:5.1909E-3:43:22:8:14:31 0/0:51:5:5:0:21:23.81%:12:2.3921E-2:44:16:5:11:21 0/1:43:8:4:4:27:29.63%:26:2.1337E-3:42:19:9:10:27 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:45:6:2:4:32:18.75%:20:1.2087E-2:44:26:12:14:32 0/0:47:5:3:2:18:27.78%:8:2.2727E-2:48:13:5:8:19 0/0:44:3:2:1:26:11.54%:25:1.1765E-1:39:23:9:14:27 0/0:0:0:0:0:14:0%:25:1E0:45:14:7:7:14 0/0:48:2:0:2:21:9.52%:25:2.439E-1:44:19:9:10:21 0/0:39:1:0:1:18:5.56%:24:5E-1:46:17:9:8:18 0/0:54:4:2:2:22:18.18%:15:5.3885E-2:45:18:11:7:22 0/1:43:8:3:5:26:30.77%:26:2.076E-3:48:18:12:6:26 0/0:49:4:3:1:26:15.38%:18:5.461E-2:43:20:7:13:27 0/0:46:6:2:4:30:20%:18:1.186E-2:47:24:12:12:30 0/0:47:5:3:2:22:22.73%:12:2.4248E-2:44:17:12:5:23 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:41:15:9:6:18 0/0:41:5:4:1:26:19.23%:17:2.531E-2:42:21:10:11:26 0/0:39:1:1:0:18:5.56%:24:5E-1:42:17:7:10:18 0/0:45:6:2:4:31:19.35%:20:1.1977E-2:41:25:14:11:32 0/0:53:3:0:3:29:10.34%:31:1.1842E-1:41:26:13:13:30 0/0:42:5:2:3:29:17.24%:22:2.5917E-2:47:24:10:14:31 0/0:52:3:2:1:13:23.08%:9:1.1E-1:46:10:6:4:13 0/1:42:10:5:5:33:30.3%:33:4.3872E-4:44:23:9:14:33 0/1:44:9:5:4:38:23.68%:29:1.1442E-3:42:29:17:12:38 0/0:43:5:3:2:15:33.33%:6:2.1073E-2:47:10:4:6:15 0/0:39:1:1:0:14:7.14%:17:5E-1:46:13:5:8:15 0/1:45:8:4:4:37:21.62%:25:2.5617E-3:39:29:10:19:39 0/0:38:2:2:0:28:7.14%:34:2.4545E-1:41:26:17:9:28 0/1:44:7:2:5:38:18.42%:22:5.7727E-3:43:31:17:14:40 0/0:42:5:3:2:31:16.13%:24:2.6257E-2:38:26:12:14:31 0/0:45:3:2:1:32:9.38%:34:1.1905E-1:40:29:14:15:33 0/0:46:3:3:0:29:10.34%:31:1.1842E-1:41:26:11:15:29 0/1:47:10:4:6:34:29.41%:33:4.51E-4:47:24:14:10:34 0/0:37:1:1:0:26:3.85%:38:5E-1:40:25:12:13:31 0/0:45:6:4:2:35:17.14%:25:1.238E-2:45:29:15:14:37 0/0:42:5:3:2:23:21.74%:14:2.4548E-2:43:18:13:5:24 0/0:60:2:2:0:30:6.67%:37:2.4576E-1:41:28:14:14:30 0/0:49:2:1:1:18:11.11%:18:2.4286E-1:41:16:8:8:19 0/0:48:2:2:0:18:11.11%:18:2.4286E-1:44:16:11:5:18 0/0:42:5:4:1:30:16.67%:21:2.6093E-2:39:25:11:14:31 0/0:45:6:3:3:30:20%:18:1.186E-2:46:24:14:10:31 0/0:42:3:0:3:24:12.5%:22:1.1702E-1:42:21:9:12:24 0/0:43:3:2:1:39:7.69%:47:1.2013E-1:43:36:15:21:39 0/0:52:3:2:1:22:13.64%:19:1.1628E-1:45:19:9:10:23 0/0:60:2:2:0:16:12.5%:15:2.4194E-1:48:14:9:5:16 0/0:49:6:4:2:23:26.09%:11:1.0777E-2:48:17:9:8:23 0/0:49:6:3:3:40:15%:30:1.2773E-2:43:34:17:17:40 0/1:48:9:4:5:25:34.62%:30:8.4928E-4:40:17:4:13:27 0/0:46:3:1:2:16:18.75%:11:1.129E-1:44:13:5:8:16 0/0:38:2:1:1:30:6.67%:37:2.4561E-1:43:27:17:10:30 0/0:49:4:4:0:23:17.39%:18:5.4264E-2:41:19:8:11:23 0/0:60:3:0:3:33:9.09%:37:1.1923E-1:44:30:14:16:36 0/0:46:4:1:3:23:17.39%:18:5.4264E-2:43:19:10:9:24 MTB_anc 1844628 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|uvrA_Rv1638|gene1675|transcript|Transcript_gene1675|Coding|1/1|c.888G>C|p.Pro296Pro|888/2919|888/2919|296/972||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1844628G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1844628G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:49:13:6:7:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:51:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:17:9:8:18:94.44%:86:2.0936E-9:38:1:1:0:18 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:39:28:11:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:65:35:30:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:36:19:17:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:13:18:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:35:16:19:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:46:17:11:6:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:50:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:25:13:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:14:24:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:31:15:16:32:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:34:14:20:35:97.14%:99:3.2089E-19:24:1:0:1:35 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:50:15:35:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:68:29:39:68:100%:99:1.6809E-40:0:0:0:0:70 1/1:41:35:19:16:36:97.22%:99:8.9137E-21:0:0:0:0:38 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:19:17:37:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:62:32:30:63:98.41%:99:1.0605E-35:38:1:0:1:63 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 1846512 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|uvrA_Rv1638|gene1675|transcript|Transcript_gene1675|Coding|1/1|c.2772C>T|p.Gly924Gly|2772/2919|2772/2919|924/972||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1846512C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1846512C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:40 0/0:0:0:0:0:16:0%:29:1E0:52:16:12:4:16 0/0:0:0:0:0:52:0%:96:1E0:45:52:27:25:53 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:22 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:32:0%:59:1E0:50:32:9:23:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:31 0/0:0:0:0:0:26:0%:47:1E0:50:26:12:14:27 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:24 0/0:0:0:0:0:29:0%:55:1E0:50:29:17:12:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:35 0/0:0:0:0:0:16:0%:29:1E0:48:16:10:6:16 0/0:0:0:0:0:68:0%:99:1E0:44:68:37:31:68 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:37:1:0:1:35:2.86%:55:5E-1:44:34:17:17:36 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:56:0%:99:1E0:44:56:23:33:57 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:24 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:38:1:0:1:43:2.33%:70:5E-1:41:42:27:15:43 0/0:0:0:0:0:23:0%:44:1E0:48:23:15:8:23 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:18:0%:32:1E0:43:18:13:5:18 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:49:0%:93:1E0:46:49:26:23:49 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:49:0%:93:1E0:45:49:29:20:49 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:52 0/0:0:0:0:0:41:0%:78:1E0:43:41:26:15:42 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:17:6:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:46 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:51:0%:97:1E0:44:51:28:23:54 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:41 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:48 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:51 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:44 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:47 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:26 0/0:0:0:0:0:53:0%:99:1E0:41:53:23:30:53 0/0:0:0:0:0:46:0%:85:1E0:43:46:31:15:46 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:60:1:0:1:51:1.96%:84:5E-1:46:50:25:25:51 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:50 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:37:1:0:1:18:5.56%:24:5E-1:43:17:8:9:18 0/0:0:0:0:0:21:0%:40:1E0:52:21:8:13:21 1/1:51:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:18:0%:32:1E0:51:18:8:10:18 0/0:0:0:0:0:34:0%:62:1E0:52:34:15:19:34 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:40 0/0:0:0:0:0:39:0%:74:1E0:49:39:23:16:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:42:0%:77:1E0:46:42:27:15:43 0/0:0:0:0:0:56:0%:99:1E0:43:56:34:22:57 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:18:0%:32:1E0:47:18:7:11:18 0/0:33:1:0:1:20:5%:27:5E-1:47:19:8:11:20 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:19 0/0:0:0:0:0:39:0%:74:1E0:48:39:14:25:41 0/0:60:1:0:1:27:3.7%:41:5E-1:50:26:13:13:28 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:38:1:0:1:33:3.03%:52:5E-1:42:32:19:13:33 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:52 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:45 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:22 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:36 0/0:0:0:0:0:48:0%:89:1E0:38:48:31:17:50 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:36 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:20 0/0:0:0:0:0:53:0%:99:1E0:42:53:29:24:54 0/0:0:0:0:0:60:0%:99:1E0:41:60:32:28:60 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:47:0%:89:1E0:40:47:29:18:49 0/0:0:0:0:0:67:0%:99:1E0:40:67:30:37:71 0/0:0:0:0:0:34:0%:62:1E0:40:34:23:11:36 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:46 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:53:0%:99:1E0:41:53:31:22:55 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:38 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:45 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:36 0/0:0:0:0:0:72:0%:99:1E0:39:72:40:32:74 0/0:60:1:0:1:40:2.5%:62:5E-1:44:39:21:18:41 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:54:0%:99:1E0:40:54:26:28:55 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:32 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:45:0%:85:1E0:46:45:30:15:46 0/0:0:0:0:0:57:0%:99:1E0:43:57:31:26:57 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:39 MTB_anc 1847760 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|synonymous_variant|LOW|Rv1639c_Rv1639c|gene1677|transcript|Transcript_gene1677|Coding|1/1|c.699A>C|p.Thr233Thr|699/1470|699/1470|233/489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1847760T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1847760T>G||||||;HOM=0;NC=0;set=filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:1:1:0:49:2.04%:80:5E-1:37:48:18:30:56 0/0:30:1:1:0:13:7.69%:18:5E-1:38:12:0:12:16 0/0:0:0:0:0:38:0%:70:1E0:37:38:14:24:44 0/0:0:0:0:0:20:0%:36:1E0:34:20:6:14:22 0/0:30:1:1:0:20:5%:27:5E-1:37:19:4:15:25 0/0:30:2:2:0:24:8.33%:27:2.4468E-1:36:22:4:18:27 0/0:30:1:1:0:26:3.85%:38:5E-1:36:25:8:17:31 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:14 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:18 0/0:32:4:4:0:34:11.76%:31:5.6946E-2:35:30:14:16:38 0/0:33:1:1:0:21:4.76%:31:5E-1:36:20:4:16:25 0/0:30:1:1:0:21:4.76%:31:5E-1:35:20:2:18:26 0/0:0:0:0:0:14:0%:25:1E0:34:14:6:8:18 0/0:0:0:0:0:35:0%:67:1E0:36:35:11:24:37 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:24 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:18 0/0:28:3:3:0:20:15%:16:1.1538E-1:36:17:3:14:21 0/0:31:1:1:0:25:4%:38:5E-1:35:24:11:13:29 0/0:30:1:1:0:7:14.29%:8:5E-1:37:6:4:2:11 0/0:32:1:1:0:25:4%:38:5E-1:36:24:8:16:27 0/0:30:1:1:0:24:4.17%:34:5E-1:35:23:5:18:30 0/0:0:0:0:0:35:0%:67:1E0:36:35:10:25:39 0/0:32:3:3:0:26:11.54%:25:1.1765E-1:37:23:9:14:31 0/0:31:2:2:0:25:8%:31:2.449E-1:38:23:8:15:34 0/0:31:1:1:0:18:5.56%:24:5E-1:35:17:7:10:23 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:16 0/0:0:0:0:0:14:0%:25:1E0:35:14:2:12:17 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:19 0/0:31:1:1:0:28:3.57%:41:5E-1:37:27:10:17:34 0/0:30:5:5:0:21:23.81%:12:2.3921E-2:38:16:5:11:23 0/0:32:1:1:0:20:5%:27:5E-1:36:19:6:13:28 0/0:34:2:2:0:17:11.76%:18:2.4242E-1:35:15:2:13:17 0/0:32:2:2:0:27:7.41%:34:2.4528E-1:36:25:9:16:35 0/0:34:1:1:0:15:6.67%:21:5E-1:37:14:5:9:19 0/0:32:1:1:0:22:4.55%:31:5E-1:36:20:3:17:30 0/0:28:2:2:0:22:9.09%:24:2.4419E-1:35:20:4:16:27 0/0:30:2:2:0:25:8%:31:2.449E-1:36:23:10:13:32 0/0:30:2:2:0:37:5.41%:50:2.4658E-1:36:35:6:29:50 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:31 0/0:30:1:1:0:28:3.57%:41:5E-1:36:27:13:14:33 0/0:0:0:0:0:19:0%:37:1E0:36:19:8:11:23 0/0:28:3:3:0:33:9.09%:37:1.1923E-1:36:30:10:20:36 0/0:32:1:1:0:9:11.11%:11:5E-1:35:8:2:6:13 0/0:0:0:0:0:17:0%:33:1E0:34:17:7:10:19 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:22 0/0:31:2:2:0:12:16.67%:10:2.3913E-1:38:10:3:7:15 0/0:29:2:2:0:19:10.53%:21:2.4324E-1:35:17:3:14:24 0/0:30:1:1:0:23:4.35%:34:5E-1:37:22:3:19:28 0/0:0:0:0:0:24:0%:44:1E0:35:24:5:19:34 0/0:35:1:1:0:29:3.45%:45:5E-1:36:28:8:20:39 0/0:31:4:4:0:15:26.67%:8:4.9808E-2:38:11:7:4:15 0/0:31:3:3:0:31:9.68%:34:1.1885E-1:36:28:8:20:37 0/0:33:2:2:0:17:11.76%:18:2.4242E-1:36:15:4:11:23 0/0:30:1:1:0:26:3.85%:38:5E-1:35:25:8:17:28 0/0:31:1:1:0:18:5.56%:24:5E-1:36:17:6:11:20 0/0:0:0:0:0:29:0%:55:1E0:36:29:4:25:32 0/0:32:1:1:0:20:5%:27:5E-1:37:19:6:13:25 0/0:33:1:1:0:22:4.55%:31:5E-1:37:21:8:13:26 0/0:30:1:1:0:33:3.03%:52:5E-1:35:32:9:23:37 0/0:0:0:0:0:35:0%:67:1E0:36:35:9:26:41 0/0:29:2:2:0:21:9.52%:25:2.439E-1:36:19:4:15:26 0/0:30:1:1:0:27:3.7%:41:5E-1:36:26:2:24:29 0/0:30:3:3:0:23:13.04%:22:1.1667E-1:35:20:5:15:27 0/0:31:1:1:0:25:4%:38:5E-1:36:24:8:16:27 0/0:25:3:3:0:27:11.11%:28:1.1792E-1:36:24:8:16:30 0/0:32:1:1:0:29:3.45%:45:5E-1:37:28:9:19:37 0/0:29:3:3:0:28:10.71%:28:1.1818E-1:34:25:9:16:31 0/0:34:1:1:0:19:5.26%:28:5E-1:35:18:5:13:27 0/0:30:1:1:0:16:6.25%:21:5E-1:36:15:7:8:19 0/0:30:2:2:0:21:9.52%:25:2.439E-1:36:19:5:14:25 0/0:33:2:2:0:25:8%:31:2.449E-1:36:23:9:14:31 0/0:32:1:1:0:28:3.57%:41:5E-1:36:27:7:20:37 0/0:30:1:1:0:12:8.33%:14:5E-1:36:11:5:6:19 0/0:0:0:0:0:23:0%:44:1E0:36:23:14:9:30 0/0:32:1:1:0:24:4.17%:34:5E-1:37:23:3:20:27 0/0:30:1:1:0:19:5.26%:28:5E-1:37:18:4:14:24 0/0:31:1:1:0:21:4.76%:31:5E-1:35:20:5:15:28 0/0:36:2:2:0:25:8%:31:2.449E-1:35:23:10:13:32 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:16 0/0:30:2:2:0:27:7.41%:34:2.4528E-1:36:25:10:15:31 0/0:0:0:0:0:21:0%:40:1E0:35:21:9:12:28 0/0:30:4:4:0:41:9.76%:44:5.79E-2:37:37:19:18:43 0/0:29:2:2:0:30:6.67%:37:2.4576E-1:37:28:9:19:33 0/0:32:2:2:0:24:8.33%:27:2.4468E-1:35:22:7:15:32 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:15 0/0:30:1:1:0:18:5.56%:24:5E-1:36:17:4:13:21 0/0:34:2:2:0:14:14.29%:12:2.4074E-1:36:12:3:9:18 0/0:31:3:3:0:29:10.34%:31:1.1842E-1:35:26:4:22:35 0/0:31:3:3:0:22:13.64%:19:1.1628E-1:37:19:6:13:27 0/0:30:1:1:0:27:3.7%:41:5E-1:36:26:8:18:33 0/0:31:6:6:0:38:15.79%:28:1.2628E-2:37:32:8:24:41 0/0:30:1:1:0:23:4.35%:34:5E-1:36:22:8:14:25 0/0:0:0:0:0:28:0%:51:1E0:35:28:11:17:34 0/0:32:2:2:0:30:6.67%:37:2.4576E-1:34:28:9:19:35 0/0:32:4:4:0:43:9.3%:47:5.8115E-2:36:39:10:29:45 0/0:32:4:4:0:28:14.29%:23:5.5746E-2:36:24:8:16:30 0/0:31:1:1:0:19:5.26%:28:5E-1:33:18:3:15:21 0/0:32:2:2:0:22:9.09%:24:2.4419E-1:36:20:7:13:26 0/0:36:2:2:0:25:8%:31:2.449E-1:36:23:6:17:31 0/0:34:2:2:0:23:8.7%:28:2.4444E-1:36:21:6:15:24 0/0:31:2:2:0:17:11.76%:18:2.4242E-1:36:15:5:10:20 0/0:33:4:4:0:21:19.05%:15:5.3471E-2:37:17:10:7:22 0/0:34:1:1:0:30:3.33%:44:5E-1:36:29:10:19:35 0/0:34:3:3:0:22:13.64%:19:1.1628E-1:36:19:3:16:26 0/0:0:0:0:0:18:0%:32:1E0:35:18:7:11:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:21 0/0:30:1:1:0:15:6.67%:21:5E-1:35:14:6:8:18 0/0:36:1:1:0:26:3.85%:38:5E-1:36:25:11:14:32 0/0:28:3:3:0:28:10.71%:28:1.1818E-1:35:25:5:20:32 0/0:31:2:2:0:29:6.9%:37:2.4561E-1:36:27:13:14:34 0/0:0:0:0:0:19:0%:37:1E0:35:19:6:13:25 0/0:32:1:1:0:17:5.88%:24:5E-1:35:16:4:12:21 0/0:27:1:1:0:25:4%:38:5E-1:37:24:4:20:28 0/0:26:1:1:0:23:4.35%:34:5E-1:36:22:7:15:25 0/0:0:0:0:0:29:0%:55:1E0:35:29:6:23:40 0/0:0:0:0:0:36:0%:66:1E0:35:36:6:30:41 0/0:35:1:1:0:23:4.35%:34:5E-1:36:22:3:19:27 0/0:33:3:3:0:27:11.11%:28:1.1792E-1:35:24:5:19:35 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:18 0/0:32:4:4:0:32:12.5%:29:5.6596E-2:35:28:10:18:41 0/0:33:3:3:0:41:7.32%:50:1.2037E-1:36:38:9:29:50 0/0:29:2:2:0:18:11.11%:18:2.4286E-1:36:16:6:10:20 0/0:26:1:1:0:17:5.88%:24:5E-1:34:16:3:13:21 0/0:0:0:0:0:30:0%:55:1E0:35:30:6:24:32 0/0:32:2:2:0:32:6.25%:40:2.4603E-1:36:30:8:22:36 0/0:30:6:6:0:36:16.67%:25:1.2467E-2:36:30:3:27:44 0/0:30:1:1:0:25:4%:38:5E-1:35:24:4:20:28 0/0:30:1:1:0:25:4%:38:5E-1:34:24:8:16:29 0/0:24:1:1:0:26:3.85%:38:5E-1:36:25:5:20:30 0/0:30:2:2:0:41:4.88%:57:2.4691E-1:36:39:8:31:46 0/0:0:0:0:0:29:0%:55:1E0:36:29:10:19:34 0/0:29:2:2:0:38:5.26%:50:2.4667E-1:35:36:12:24:48 0/0:34:1:1:0:23:4.35%:34:5E-1:37:22:3:19:27 0/0:33:4:4:0:32:12.5%:29:5.6596E-2:35:28:4:24:42 0/0:31:4:4:0:31:12.9%:29:5.6405E-2:35:27:4:23:31 0/0:30:1:1:0:33:3.03%:52:5E-1:36:32:13:19:36 0/0:0:0:0:0:37:0%:70:1E0:36:37:7:30:39 0/0:33:5:5:0:23:21.74%:14:2.4548E-2:35:18:4:14:30 0/0:31:4:4:0:29:13.79%:23:5.5746E-2:35:24:4:20:33 0/0:28:1:1:0:33:3.03%:52:5E-1:36:32:6:26:36 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:29 0/0:32:2:2:0:27:7.41%:34:2.4528E-1:35:25:8:17:29 0/0:34:1:1:0:21:4.76%:31:5E-1:35:20:4:16:27 0/0:33:1:1:0:26:3.85%:38:5E-1:36:25:10:15:29 0/0:29:3:3:0:39:7.69%:47:1.2013E-1:36:36:7:29:45 0/0:30:2:2:0:14:14.29%:12:2.4074E-1:35:12:3:9:21 0/0:32:1:1:0:22:4.55%:31:5E-1:34:21:6:15:23 0/1:30:8:8:0:40:20%:25:2.653E-3:36:32:10:22:43 0/0:0:0:0:0:29:0%:55:1E0:37:29:3:26:34 0/0:0:0:0:0:19:0%:37:1E0:34:19:7:12:25 MTB_anc 1849609 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|lysX_Rv1640c|gene1678|transcript|Transcript_gene1678|Coding|1/1|c.2427G>A|p.Arg809Arg|2427/3519|2427/3519|809/1172||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.1849609C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1849609C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1849609C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:55:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:65:26:39:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:25:10:15:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:27:11:16:28:96.43%:99:3.7915E-15:32:1:1:0:28 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:52:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:69 1/1:46:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:43:22:21:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:63:34:29:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:55:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:32:14:18:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:40:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:64:35:29:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:41:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:52 1/1:44:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:42:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:65:29:36:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:48:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:48:33:15:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 1853231 . C T . PASS AC=10;AF=0.033;AN=300;ANN=T|synonymous_variant|LOW|rplT_Rv1643|gene1681|transcript|Transcript_gene1681|Coding|1/1|c.48C>T|p.Ser16Ser|48/390|48/390|16/129||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1853231C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1853231C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:54 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:21 0/0:0:0:0:0:51:0%:97:1E0:46:51:22:29:51 0/0:0:0:0:0:35:0%:67:1E0:49:35:15:20:35 0/0:0:0:0:0:25:0%:48:1E0:48:25:9:16:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:31:1:1:0:34:2.94%:51:5E-1:43:33:14:19:35 0/0:0:0:0:0:34:0%:62:1E0:51:34:18:16:35 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:49:36:13:23:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:19 0/0:0:0:0:0:62:0%:99:1E0:46:62:28:34:63 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:26 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:48:23:9:14:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:59:0%:99:1E0:43:59:31:28:60 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:31 0/0:0:0:0:0:46:0%:85:1E0:48:46:19:27:46 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:16:0%:29:1E0:42:16:7:9:16 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:21 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:37:1:1:0:56:1.79%:91:5E-1:49:55:21:34:57 0/0:0:0:0:0:46:0%:85:1E0:43:46:29:17:48 0/0:0:0:0:0:54:0%:99:1E0:44:54:22:32:54 0/0:0:0:0:0:34:0%:62:1E0:43:34:9:25:34 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 0/0:0:0:0:0:51:0%:97:1E0:43:51:20:31:51 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:45 0/0:0:0:0:0:34:0%:62:1E0:50:34:17:17:34 0/0:60:1:1:0:43:2.33%:70:5E-1:44:42:23:19:44 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:11:24:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:51:0%:97:1E0:45:51:24:27:52 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:44 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:42 0/0:0:0:0:0:41:0%:78:1E0:47:41:23:18:41 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:52:31:18:13:31 0/0:0:0:0:0:69:0%:99:1E0:46:69:33:36:70 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:47:0%:89:1E0:47:47:22:25:47 0/0:0:0:0:0:16:0%:29:1E0:54:16:8:8:16 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:23:0%:44:1E0:53:23:12:11:23 0/0:60:1:0:1:20:5%:27:5E-1:51:19:8:11:20 0/0:0:0:0:0:40:0%:74:1E0:49:40:17:23:40 1/1:41:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:36 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:30 0/0:0:0:0:0:22:0%:40:1E0:49:22:8:14:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:51:31:17:14:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:50:0%:92:1E0:41:50:31:19:52 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:30 0/0:39:1:0:1:62:1.61%:99:5E-1:46:61:25:36:63 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:48:0%:89:1E0:38:48:20:28:49 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:25 0/0:0:0:0:0:69:0%:99:1E0:43:69:28:41:69 0/0:0:0:0:0:50:0%:92:1E0:42:50:29:21:53 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:45 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:52 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:45 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:51 0/0:0:0:0:0:48:0%:89:1E0:43:48:28:20:50 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:38 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:42 1/1:39:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:59:0%:99:1E0:40:59:32:27:59 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:52 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:45:0%:85:1E0:39:45:31:14:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:46 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:48 0/0:0:0:0:0:54:0%:99:1E0:42:54:24:30:56 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:39 MTB_anc 1859559 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|pheS_Rv1649|gene1687|transcript|Transcript_gene1687|Coding|1/1|c.827A>C|p.Asp276Ala|827/1026|827/1026|276/341||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1859559A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1859559A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:35:16:19:36:97.22%:99:8.3613E-20:38:1:0:1:36 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:52:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:30:18:12:31:96.77%:99:8.4556E-18:0:0:0:0:35 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:64:35:29:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:39:59:36:23:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:57 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 1860381 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|synonymous_variant|LOW|pheT_Rv1650|gene1688|transcript|Transcript_gene1688|Coding|1/1|c.624C>T|p.Ile208Ile|624/2496|624/2496|208/831||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1860381C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1860381C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:41 0/0:0:0:0:0:18:0%:32:1E0:43:18:6:12:18 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:21:0%:40:1E0:42:21:6:15:21 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:24 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:24 0/0:0:0:0:0:21:0%:40:1E0:38:21:16:5:21 0/0:0:0:0:0:25:0%:48:1E0:45:25:6:19:26 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:15 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:42 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:21 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:47 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:20 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:18 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:18 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:38 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:26 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:19 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:51:0%:97:1E0:43:51:18:33:53 0/0:0:0:0:0:42:0%:77:1E0:47:42:27:15:43 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:39 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:40 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:11:0%:22:1E0:39:11:4:7:12 0/0:0:0:0:0:49:0%:93:1E0:43:49:18:31:49 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:47 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:52 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:34 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:54:0%:99:1E0:45:54:26:28:54 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:13:0%:25:1E0:48:13:5:8:13 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:48 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:37 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:30 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:39 0/0:0:0:0:0:10:0%:17:1E0:49:10:7:3:10 0/0:0:0:0:0:43:0%:82:1E0:47:43:15:28:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:10:21:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:15 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:25:0%:48:1E0:39:25:7:18:26 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:15 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:23 0/0:0:0:0:0:29:0%:55:1E0:40:29:8:21:29 0/0:0:0:0:0:17:0%:33:1E0:40:17:13:4:18 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:36 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:17 0/0:38:1:0:1:42:2.38%:66:5E-1:42:41:20:21:44 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:18 0/0:0:0:0:0:62:0%:99:1E0:44:62:29:33:62 0/0:0:0:0:0:45:0%:85:1E0:41:45:14:31:45 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:51:0%:97:1E0:37:51:20:31:52 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:39 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:40 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:42 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:21 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:38 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:28 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 0/0:0:0:0:0:57:0%:99:1E0:38:57:32:25:60 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:50:0%:92:1E0:40:50:19:31:51 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:22 0/0:0:0:0:0:18:0%:32:1E0:44:18:5:13:18 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:21 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:36 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:47 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 MTB_anc 1864396 . C T . PASS AC=2;AF=0.010;AN=200;ANN=T|synonymous_variant|LOW|PE_PGRS30_Rv1651c|gene1689|transcript|Transcript_gene1689|Coding|1/1|c.987G>A|p.Leu329Leu|987/3036|987/3036|329/1011||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1864396C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1864396C>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:34:8:7:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:39:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:34:13:9:4:13 0/0:0:0:0:0:13:0%:25:1E0:36:13:10:3:13 0/0:0:0:0:0:8:0%:14:1E0:34:8:3:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:34:10:8:2:10 0/0:0:0:0:0:7:0%:14:1E0:37:7:5:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:36:7:6:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:35:9:7:2:10 0/0:0:0:0:0:12:0%:21:1E0:33:12:7:5:12 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:15:0%:29:1E0:34:15:10:5:15 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:36:8:5:3:8 0/0:0:0:0:0:7:0%:14:1E0:34:7:4:3:7 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:13 0/0:0:0:0:0:13:0%:25:1E0:38:13:8:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:34:12:10:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 0/0:0:0:0:0:11:0%:22:1E0:35:11:8:3:11 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:7 0/0:0:0:0:0:15:0%:29:1E0:32:15:9:6:15 0/0:0:0:0:0:18:0%:32:1E0:35:18:11:7:19 0/0:0:0:0:0:17:0%:33:1E0:36:17:14:3:17 0/0:0:0:0:0:8:0%:14:1E0:37:8:7:1:8 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:36:8:5:3:8 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:12 0/0:0:0:0:0:8:0%:14:1E0:39:8:7:1:9 0/0:0:0:0:0:8:0%:14:1E0:40:8:4:4:9 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:13 0/0:0:0:0:0:10:0%:17:1E0:36:10:7:3:10 0/0:0:0:0:0:15:0%:29:1E0:34:15:13:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:17:0%:33:1E0:35:17:13:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:41:8:6:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:16 0/0:0:0:0:0:9:0%:18:1E0:35:9:8:1:9 0/0:0:0:0:0:10:0%:17:1E0:38:10:9:1:11 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:8 0/0:0:0:0:0:10:0%:17:1E0:34:10:7:3:10 0/0:0:0:0:0:10:0%:17:1E0:38:10:9:1:11 0/0:0:0:0:0:15:0%:29:1E0:38:15:14:1:16 0/0:0:0:0:0:10:0%:17:1E0:37:10:9:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:35:15:13:2:15 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:33:1:1:0:13:7.69%:18:5E-1:35:12:7:5:13 0/0:0:0:0:0:11:0%:22:1E0:34:11:7:4:12 0/0:0:0:0:0:9:0%:18:1E0:35:9:9:0:9 0/0:0:0:0:0:13:0%:25:1E0:40:13:9:4:14 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:7 0/0:0:0:0:0:8:0%:14:1E0:35:8:4:4:9 0/0:0:0:0:0:12:0%:21:1E0:37:12:9:3:12 0/0:0:0:0:0:8:0%:14:1E0:36:8:8:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:35:11:8:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:36:9:5:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:25:1E0:33:13:9:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:13:0%:25:1E0:37:13:10:3:13 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 0/0:0:0:0:0:13:0%:25:1E0:35:13:8:5:13 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:11 0/0:0:0:0:0:10:0%:17:1E0:35:10:9:1:10 0/0:0:0:0:0:13:0%:25:1E0:36:13:12:1:13 0/0:0:0:0:0:16:0%:29:1E0:36:16:16:0:17 0/0:0:0:0:0:13:0%:25:1E0:38:13:9:4:13 0/0:0:0:0:0:8:0%:14:1E0:35:8:5:3:8 0/0:0:0:0:0:12:0%:21:1E0:34:12:8:4:12 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:7 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:21 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:7 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:34:15:14:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:41:7:6:1:8 0/0:0:0:0:0:11:0%:22:1E0:39:11:9:2:13 0/0:0:0:0:0:14:0%:25:1E0:38:14:12:2:15 0/0:0:0:0:0:9:0%:18:1E0:32:9:8:1:9 0/0:0:0:0:0:9:0%:18:1E0:35:9:7:2:9 0/0:0:0:0:0:9:0%:18:1E0:35:9:8:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:39:8:7:1:9 0/0:0:0:0:0:7:0%:14:1E0:36:7:5:2:7 0/0:0:0:0:0:7:0%:14:1E0:33:7:3:4:7 0/0:0:0:0:0:7:0%:14:1E0:34:7:4:3:7 0/0:0:0:0:0:11:0%:22:1E0:34:11:9:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:35:16:11:5:17 0/0:0:0:0:0:9:0%:18:1E0:36:9:7:2:9 0/0:0:0:0:0:7:0%:14:1E0:34:7:5:2:7 0/0:0:0:0:0:7:0%:14:1E0:34:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:35:7:6:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:10:0%:17:1E0:34:10:9:1:10 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 0/0:0:0:0:0:12:0%:21:1E0:35:12:10:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:15 0/0:34:1:1:0:13:7.69%:18:5E-1:36:12:9:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:36:10:9:1:10 0/0:0:0:0:0:16:0%:29:1E0:35:16:14:2:16 0/0:0:0:0:0:9:0%:18:1E0:34:9:5:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:12:0%:21:1E0:36:12:11:1:12 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:16:0%:29:1E0:40:16:13:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 1864811 . T C . PASS AC=262;AF=1.00;AN=262;ANN=C|missense_variant|MODERATE|PE_PGRS30_Rv1651c|gene1689|transcript|Transcript_gene1689|Coding|1/1|c.572A>G|p.Asn191Ser|572/3036|572/3036|191/1011||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1864811T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1864811T>C||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:32:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:25:20:5:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:11:6:5:12:91.67%:53:4.8074E-6:33:1:0:1:12 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:16:16:0:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 MTB_anc 1864924 . T A . PASS AC=288;AF=1.00;AN=288;ANN=A|synonymous_variant|LOW|PE_PGRS30_Rv1651c|gene1689|transcript|Transcript_gene1689|Coding|1/1|c.459A>T|p.Gly153Gly|459/3036|459/3036|153/1011||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1864924T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1864924T>A||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:31:26:5:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:19:15:4:20:95%:99:2.8292E-11:0:0:0:0:22 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:13:12:1:14:92.86%:64:3.7391E-7:38:1:0:1:14 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:17:11:6:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:27:17:10:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:36:16:16:0:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:25:23:2:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:26:23:3:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:29:26:3:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:31:25:6:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:10:8:2:11:90.91%:52:5.4125E-6:0:0:0:0:11 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:28 1/1:35:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:21:20:1:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:12:12:0:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:32:28:4:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:35:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:34:28:6:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 MTB_anc 1871354 . A T . PASS AC=4;AF=0.013;AN=300;ANN=T|stop_lost&splice_region_variant|HIGH|argR_Rv1657|gene1695|transcript|Transcript_gene1695|Coding|1/1|c.513A>T|p.Ter171Tyrext*?|513/513|513/513|171/170||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1871354A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1871354A>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:43:56:34:22:56 0/0:0:0:0:0:18:0%:32:1E0:46:18:5:13:18 0/0:0:0:0:0:49:0%:93:1E0:47:49:33:16:49 0/0:0:0:0:0:25:0%:48:1E0:47:25:18:7:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:28 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:21 0/0:0:0:0:0:26:0%:47:1E0:48:26:8:18:27 0/0:0:0:0:0:32:0%:59:1E0:48:32:21:11:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:12:23:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:12:0%:21:1E0:47:12:5:7:13 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:5:18:24 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:46 0/0:0:0:0:0:29:0%:55:1E0:50:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:37 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:27 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:50 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:35 0/0:0:0:0:0:49:0%:93:1E0:45:49:29:20:50 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:19 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:47:0%:89:1E0:46:47:28:19:47 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:48:0%:89:1E0:43:48:19:29:49 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:34 0/0:0:0:0:0:18:0%:32:1E0:50:18:4:14:18 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:48 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:55:0%:99:1E0:45:55:25:30:55 0/0:0:0:0:0:50:0%:92:1E0:42:50:30:20:51 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:42:0%:77:1E0:45:42:19:23:43 0/0:0:0:0:0:20:0%:36:1E0:48:20:7:13:20 0/0:0:0:0:0:24:0%:44:1E0:47:24:17:7:24 0/0:0:0:0:0:44:0%:81:1E0:48:44:22:22:44 0/0:0:0:0:0:69:0%:99:1E0:44:69:30:39:69 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:24:0%:44:1E0:48:24:7:17:24 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:20:0%:36:1E0:49:20:12:8:20 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:35:0%:67:1E0:49:35:14:21:35 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:46 0/0:0:0:0:0:33:0%:63:1E0:50:33:16:17:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:47:0%:89:1E0:46:47:25:22:47 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:33:0%:63:1E0:50:33:21:12:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:28 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:33 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:52:0%:96:1E0:41:52:24:28:52 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:38 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:24 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:39 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:27 0/0:0:0:0:0:48:0%:89:1E0:45:48:21:27:49 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:26 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:50 0/0:0:0:0:0:55:0%:99:1E0:43:55:32:23:56 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:19 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:40:0%:74:1E0:38:40:18:22:41 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:35 0/0:0:0:0:0:45:0%:85:1E0:40:45:28:17:49 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:45 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:30:12:44 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:56:0%:99:1E0:40:56:25:31:58 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:40 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:46 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:55:0%:99:1E0:43:55:28:27:58 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 MTB_anc 1872959 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|argH_Rv1659|gene1697|transcript|Transcript_gene1697|Coding|1/1|c.321G>A|p.Arg107Arg|321/1413|321/1413|107/470||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1872959G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1872959G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:49:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:35:18:17:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:50:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:50:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:40:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 1875207 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|pks10_Rv1660|gene1698|transcript|Transcript_gene1698|Coding|1/1|c.1048C>T|p.Leu350Leu|1048/1062|1048/1062|350/353||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1875207C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1875207C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:53:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:51:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:51:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:54:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:43:22:21:44:97.73%:99:1.7144E-24:38:1:0:1:44 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:61:24:37:61:100%:99:2.609E-36:0:0:0:0:63 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:40:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:39:21:18:40:97.5%:99:3.8137E-22:60:1:1:0:40 1/1:45:49:19:30:50:98%:99:5.0549E-28:38:1:1:0:50 1/1:42:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 MTB_anc 1878769 . C T . PASS AC=298;AF=1.00;AN=298;ANN=T|missense_variant|MODERATE|pks7_Rv1661|gene1699|transcript|Transcript_gene1699|Coding|1/1|c.3466C>T|p.His1156Tyr|3466/6381|3466/6381|1156/2126||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1878769C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1878769C>T||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:31:20:11:32:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:36:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 MTB_anc 1879841 . T G . PASS AC=2;AF=6.711e-03;AN=298;ANN=G|missense_variant|MODERATE|pks7_Rv1661|gene1699|transcript|Transcript_gene1699|Coding|1/1|c.4538T>G|p.Val1513Gly|4538/6381|4538/6381|1513/2126||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1879841T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1879841T>G||||||;HOM=0;set=filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:32:4:4:0:26:15.38%:20:5.5222E-2:37:22:5:17:26 0/0:32:2:2:0:13:15.38%:13:2.4E-1:38:11:2:9:17 0/0:30:5:5:0:37:13.51%:32:2.706E-2:37:32:5:27:39 0/0:32:2:2:0:20:10%:21:2.4359E-1:36:18:2:16:22 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:11 0/0:30:2:2:0:26:7.69%:30:2.451E-1:37:24:5:19:27 0/0:31:5:5:0:23:21.74%:14:2.4548E-2:37:18:4:14:24 0/0:31:2:2:0:15:13.33%:16:2.4138E-1:37:13:3:10:16 0/0:33:4:4:0:22:18.18%:15:5.3885E-2:39:18:5:13:25 0/0:32:4:4:0:27:14.81%:23:5.5494E-2:38:23:5:18:29 0/0:30:3:3:0:22:13.64%:19:1.1628E-1:37:19:2:17:23 0/0:36:2:2:0:24:8.33%:27:2.4468E-1:37:22:12:10:27 0/0:33:4:4:0:15:26.67%:8:4.9808E-2:39:11:1:10:16 0/0:32:5:5:0:28:17.86%:19:2.5729E-2:38:23:2:21:28 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:15 0/0:30:3:3:0:19:15.79%:17:1.1486E-1:37:16:6:10:21 0/0:30:1:1:0:13:7.69%:18:5E-1:39:12:2:10:16 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:16 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:13 0/0:31:2:2:0:24:8.33%:27:2.4468E-1:37:22:4:18:24 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:18 0/0:31:3:3:0:26:11.54%:25:1.1765E-1:37:23:3:20:30 0/0:31:6:6:0:28:21.43%:16:1.1603E-2:37:22:5:17:31 0/0:32:3:3:0:30:10%:31:1.1864E-1:37:27:7:20:32 0/0:34:2:2:0:17:11.76%:18:2.4242E-1:39:15:5:10:19 0/0:26:1:1:0:10:10%:11:5E-1:35:9:5:4:12 0/0:31:3:3:0:22:13.64%:19:1.1628E-1:36:19:2:17:22 0/0:37:1:1:0:20:5%:27:5E-1:37:19:2:17:26 0/0:31:2:2:0:19:10.53%:21:2.4324E-1:35:17:7:10:20 0/0:33:2:2:0:14:14.29%:12:2.4074E-1:36:12:3:9:16 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:16 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:20 0/0:32:1:1:0:20:5%:27:5E-1:38:19:5:14:23 0/0:32:1:1:0:15:6.67%:21:5E-1:38:14:6:8:17 0/0:31:3:3:0:36:8.33%:40:1.1972E-1:38:33:9:24:40 0/0:31:6:6:0:21:28.57%:9:1.0344E-2:37:15:4:11:22 0/0:33:3:3:0:18:16.67%:14:1.1429E-1:38:15:2:13:20 0/0:35:5:5:0:50:10%:49:2.8142E-2:38:45:14:31:55 0/0:31:2:2:0:29:6.9%:37:2.4561E-1:37:27:7:20:31 0/0:31:6:6:0:29:20.69%:18:1.1736E-2:39:23:3:20:32 0/1:31:7:7:0:19:36.84%:23:3.9926E-3:37:12:2:10:21 0/0:32:2:2:0:27:7.41%:34:2.4528E-1:37:25:8:17:30 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:12 0/0:32:2:2:0:13:15.38%:13:2.4E-1:37:11:1:10:17 0/0:34:2:2:0:21:9.52%:25:2.439E-1:38:19:4:15:23 0/0:33:2:2:0:19:10.53%:21:2.4324E-1:36:17:7:10:20 0/0:29:2:2:0:15:13.33%:16:2.4138E-1:39:13:3:10:18 0/0:32:3:3:0:22:13.64%:19:1.1628E-1:37:19:5:14:26 0/0:34:2:2:0:17:11.76%:18:2.4242E-1:38:15:4:11:19 0/0:34:1:1:0:25:4%:38:5E-1:38:24:10:14:29 0/0:0:0:0:0:15:0%:29:1E0:38:15:4:11:15 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:17 0/0:32:1:1:0:24:4.17%:34:5E-1:37:23:3:20:24 0/0:31:1:1:0:16:6.25%:21:5E-1:36:15:3:12:16 0/0:31:2:2:0:21:9.52%:25:2.439E-1:38:19:1:18:23 0/0:0:0:0:0:17:0%:33:1E0:38:17:1:16:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:31:2:2:0:21:9.52%:25:2.439E-1:37:19:3:16:24 0/0:31:2:2:0:15:13.33%:16:2.4138E-1:37:13:4:9:18 0/0:31:3:3:0:41:7.32%:50:1.2037E-1:37:38:9:29:44 0/0:31:2:2:0:15:13.33%:16:2.4138E-1:37:13:2:11:16 0/0:33:2:2:0:22:9.09%:24:2.4419E-1:38:20:6:14:23 0/0:31:4:4:0:30:13.33%:26:5.62E-2:37:26:8:18:32 0/0:30:6:6:0:28:21.43%:16:1.1603E-2:37:22:7:15:30 0/0:34:2:2:0:32:6.25%:40:2.4603E-1:37:30:6:24:36 0/0:34:2:2:0:45:4.44%:64:2.4719E-1:38:43:9:34:52 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:9 0/0:33:2:2:0:33:6.06%:44:2.4615E-1:37:31:12:19:35 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:14 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:11 0/0:31:3:3:0:30:10%:31:1.1864E-1:37:27:7:20:30 0/0:31:2:2:0:24:8.33%:27:2.4468E-1:37:22:4:18:25 0/0:31:3:3:0:10:30%:4:1.0526E-1:37:7:3:4:12 0/0:31:5:5:0:23:21.74%:14:2.4548E-2:37:18:4:14:26 0/0:0:0:0:0:19:0%:37:1E0:39:19:4:15:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:4:15:22 0/0:0:0:0:0:18:0%:32:1E0:37:18:2:16:21 0/0:32:5:5:0:26:19.23%:17:2.531E-2:37:21:5:16:28 0/0:38:1:1:0:16:6.25%:21:5E-1:37:15:4:11:17 0/0:34:1:1:0:9:11.11%:11:5E-1:37:8:0:8:13 0/0:31:4:4:0:27:14.81%:23:5.5494E-2:36:23:10:13:30 0/0:34:2:2:0:11:18.18%:10:2.381E-1:36:9:3:6:13 0/0:32:1:1:0:15:6.67%:21:5E-1:37:14:5:9:18 0/0:30:3:3:0:22:13.64%:19:1.1628E-1:37:19:2:17:25 0/0:26:1:1:0:14:7.14%:17:5E-1:38:13:4:9:16 0/0:31:2:2:0:24:8.33%:27:2.4468E-1:37:22:4:18:25 0/0:32:1:1:0:13:7.69%:18:5E-1:38:12:2:10:14 0/0:34:2:2:0:16:12.5%:15:2.4194E-1:36:14:7:7:16 0/0:31:4:4:0:23:17.39%:18:5.4264E-2:37:19:2:17:25 0/0:30:1:1:0:12:8.33%:14:5E-1:37:11:6:5:13 0/0:30:5:5:0:24:20.83%:14:2.4823E-2:38:19:4:15:25 0/0:32:1:1:0:20:5%:27:5E-1:38:19:6:13:21 0/0:31:2:2:0:24:8.33%:27:2.4468E-1:37:22:5:17:24 0/0:31:3:3:0:24:12.5%:22:1.1702E-1:37:21:5:16:27 0/0:31:2:2:0:25:8%:31:2.449E-1:37:23:6:17:25 0/0:32:3:3:0:20:15%:16:1.1538E-1:37:17:4:13:21 0/0:37:1:1:0:20:5%:27:5E-1:37:19:6:13:21 0/0:32:1:1:0:15:6.67%:21:5E-1:37:14:4:10:15 0/0:35:2:2:0:13:15.38%:13:2.4E-1:37:11:1:10:14 0/0:32:1:1:0:31:3.23%:48:5E-1:37:30:4:26:32 0/0:0:0:0:0:17:0%:33:1E0:37:17:0:17:21 0/0:33:2:2:0:17:11.76%:18:2.4242E-1:37:15:4:11:20 0/0:26:1:1:0:15:6.67%:21:5E-1:37:14:5:9:20 0/0:31:2:2:0:16:12.5%:15:2.4194E-1:38:14:1:13:17 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:16 0/0:32:1:1:0:21:4.76%:31:5E-1:36:20:5:15:24 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:11 0/0:32:5:5:0:23:21.74%:14:2.4548E-2:36:18:4:14:25 0/0:0:0:0:0:17:0%:33:1E0:37:17:3:14:20 0/0:28:2:2:0:20:10%:21:2.4359E-1:38:18:5:13:23 0/0:27:5:5:0:28:17.86%:19:2.5729E-2:36:23:8:15:29 0/0:32:2:2:0:19:10.53%:21:2.4324E-1:37:17:4:13:20 0/0:32:2:2:0:20:10%:21:2.4359E-1:37:18:2:16:21 0/0:0:0:0:0:12:0%:21:1E0:37:12:2:10:12 0/0:32:1:1:0:10:10%:11:5E-1:37:9:1:8:10 0/0:34:1:1:0:18:5.56%:24:5E-1:37:17:5:12:21 0/0:0:0:0:0:12:0%:21:1E0:37:12:2:10:13 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:28 0/0:32:1:1:0:13:7.69%:18:5E-1:37:12:1:11:16 0/0:35:2:2:0:11:18.18%:10:2.381E-1:37:9:4:5:11 0/0:32:1:1:0:18:5.56%:24:5E-1:37:17:2:15:18 0/0:32:1:1:0:16:6.25%:21:5E-1:37:15:1:14:17 0/0:30:1:1:0:11:9.09%:14:5E-1:36:10:1:9:11 0/0:0:0:0:0:11:0%:22:1E0:38:11:2:9:12 0/0:32:1:1:0:12:8.33%:14:5E-1:36:11:1:10:14 0/0:30:3:3:0:18:16.67%:14:1.1429E-1:37:15:2:13:19 0/0:0:0:0:0:11:0%:22:1E0:37:11:2:9:11 0/0:35:2:2:0:13:15.38%:13:2.4E-1:36:11:2:9:14 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:10 0/0:30:1:1:0:14:7.14%:17:5E-1:37:13:2:11:14 0/0:35:1:1:0:15:6.67%:21:5E-1:37:14:3:11:16 0/0:30:3:3:0:19:15.79%:17:1.1486E-1:36:16:2:14:21 0/0:35:1:1:0:12:8.33%:14:5E-1:37:11:2:9:12 0/0:32:2:2:0:16:12.5%:15:2.4194E-1:36:14:0:14:19 0/0:32:1:1:0:9:11.11%:11:5E-1:37:8:3:5:10 0/0:34:3:3:0:24:12.5%:22:1.1702E-1:37:21:3:18:25 0/0:34:2:2:0:36:5.56%:47:2.4648E-1:37:34:3:31:39 0/0:31:2:2:0:20:10%:21:2.4359E-1:38:18:3:15:21 0/0:33:3:3:0:31:9.68%:34:1.1885E-1:38:28:5:23:33 0/0:35:4:4:0:30:13.33%:26:5.62E-2:37:26:8:18:34 0/0:32:2:2:0:19:10.53%:21:2.4324E-1:37:17:2:15:21 0/0:32:2:2:0:11:18.18%:10:2.381E-1:36:9:2:7:13 0/0:32:5:5:0:16:31.25%:6:2.1691E-2:37:11:1:10:16 0/0:34:4:4:0:29:13.79%:26:5.5981E-2:37:25:7:18:30 0/0:32:4:4:0:20:20%:13:5.3015E-2:37:16:7:9:21 0/1:31:7:7:0:33:21.21%:22:5.4855E-3:37:26:4:22:35 0/0:32:5:5:0:34:14.71%:27:2.6693E-2:37:29:5:24:38 0/0:32:3:3:0:21:14.29%:19:1.1585E-1:37:18:5:13:23 0/0:33:6:6:0:41:14.63%:33:1.2841E-2:37:35:6:29:41 0/0:32:4:4:0:19:21.05%:13:5.251E-2:37:15:0:15:20 MTB_anc 1880821 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|pks7_Rv1661|gene1699|transcript|Transcript_gene1699|Coding|1/1|c.5518G>C|p.Gly1840Arg|5518/6381|5518/6381|1840/2126||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1880821G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1880821G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:16:0%:29:1E0:49:16:5:11:16 0/0:0:0:0:0:51:0%:97:1E0:47:51:22:29:51 0/0:0:0:0:0:30:0%:55:1E0:48:30:9:21:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:33 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:14:21:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:38:0%:70:1E0:48:38:22:16:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:43 0/0:0:0:0:0:21:0%:40:1E0:53:21:13:8:21 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:11:0%:22:1E0:46:11:3:8:11 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:46 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:39:1:1:0:37:2.7%:59:5E-1:43:36:17:19:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:43 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:50 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:32 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:28 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:41:0%:78:1E0:48:41:20:21:41 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:46 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:34 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:40 0/0:0:0:0:0:17:0%:33:1E0:48:17:10:7:17 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:17 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:40 0/1:44:19:9:10:38:50%:70:9.2415E-8:46:19:10:9:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:38 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:41 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:46 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:62:0%:99:1E0:47:62:30:32:62 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:40 0/0:0:0:0:0:22:0%:40:1E0:53:22:12:10:23 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:19 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:32 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:17 0/0:0:0:0:0:42:0%:77:1E0:48:42:27:15:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:21:0%:40:1E0:52:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:30:16:46 0/0:0:0:0:0:41:0%:78:1E0:47:41:27:14:41 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:17 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:45 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:23:0%:44:1E0:49:23:8:15:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:53:0%:99:1E0:40:53:29:24:55 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:39:1:1:0:37:2.7%:59:5E-1:43:36:19:17:37 0/0:0:0:0:0:22:0%:40:1E0:41:22:4:18:22 0/0:0:0:0:0:46:0%:85:1E0:42:46:16:30:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:36 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:20 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:31 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:48 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:46:0%:85:1E0:39:46:23:23:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:14:26:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:24:9:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:42 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:39:1:0:1:34:2.94%:51:5E-1:43:33:18:15:35 0/0:0:0:0:0:50:0%:92:1E0:44:50:28:22:50 0/0:0:0:0:0:54:0%:99:1E0:45:54:26:28:55 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 MTB_anc 1883603 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|pks8_Rv1662|gene1700|transcript|Transcript_gene1700|Coding|1/1|c.1900G>A|p.Ala634Thr|1900/4809|1900/4809|634/1602||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1883603G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1883603G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:15 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:30:0%:55:1E0:50:30:13:17:30 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:17 0/0:0:0:0:0:37:0%:70:1E0:51:37:17:20:37 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:46 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:53 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:13:5:19 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:46:0%:85:1E0:45:46:16:30:46 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:19 0/0:0:0:0:0:27:0%:52:1E0:51:27:19:8:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:30 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:20 0/0:0:0:0:0:21:0%:40:1E0:45:21:6:15:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:30 0/0:0:0:0:0:43:0%:82:1E0:49:43:10:33:44 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:29 0/0:0:0:0:0:51:0%:97:1E0:46:51:25:26:52 0/0:0:0:0:0:52:0%:96:1E0:46:52:26:26:53 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:8:18:27 0/0:0:0:0:0:37:0%:70:1E0:50:37:22:15:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:12:29:43 0/0:0:0:0:0:38:0%:70:1E0:49:38:21:17:40 0/0:0:0:0:0:14:0%:25:1E0:45:14:6:8:14 0/0:0:0:0:0:43:0%:82:1E0:47:43:19:24:47 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:19 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:43:0%:82:1E0:45:43:17:26:43 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:48:0%:89:1E0:48:48:23:25:48 0/0:0:0:0:0:58:0%:99:1E0:48:58:26:32:59 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:20 0/0:0:0:0:0:50:0%:92:1E0:47:50:25:25:50 0/0:0:0:0:0:20:0%:36:1E0:54:20:11:9:20 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:19 0/0:38:1:0:1:34:2.94%:51:5E-1:46:33:13:20:34 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:20 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:16 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:15:0%:29:1E0:48:15:9:6:15 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:29 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:19 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:37 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:24 0/0:0:0:0:0:19:0%:37:1E0:48:19:6:13:20 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:30 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:48 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:26 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:22 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:45 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:46 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 0/0:0:0:0:0:36:0%:66:1E0:47:36:25:11:39 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:24 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:45:0%:85:1E0:43:45:27:18:46 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:18 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:18 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:39 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:41 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:34 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:29 0/0:0:0:0:0:41:0%:78:1E0:40:41:28:13:42 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:58:0%:99:1E0:39:58:33:25:61 0/0:0:0:0:0:43:0%:82:1E0:41:43:29:14:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:35 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:48 0/0:36:1:1:0:37:2.7%:59:5E-1:40:36:14:22:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:45 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:35 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:52 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:40 MTB_anc 1883712 . C CG . PASS AC=1;AF=3.333e-03;AN=300;ANN=CG|frameshift_variant|HIGH|pks8_Rv1662|gene1700|transcript|Transcript_gene1700|Coding|1/1|c.2012dupG|p.Leu672fs|2013/4809|2013/4809|671/1602||INFO_REALIGN_3_PRIME,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1883712_1883713insG||||||,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1883712_1883713insG||||||;HOM=0;LOF=(pks8_Rv1662|gene1700|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:46 0/0:0:0:0:0:13:0%:25:1E0:49:13:6:7:13 0/0:0:0:0:0:42:0%:77:1E0:40:42:31:11:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:23:9:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:9:0%:18:1E0:43:9:4:5:11 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:60:1:0:1:41:2.44%:66:5E-1:42:40:28:12:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:23 0/0:0:0:0:0:53:0%:99:1E0:39:53:32:21:56 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:17:6:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:17 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:22 0/0:0:0:0:0:36:0%:66:1E0:41:36:24:12:37 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:32 0/0:60:1:0:1:20:5%:27:5E-1:45:19:11:8:21 0/0:0:0:0:0:26:0%:47:1E0:43:26:20:6:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:30 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:41:0%:78:1E0:43:41:26:15:43 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:11:22:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:35 0/0:0:0:0:0:31:0%:59:1E0:37:31:20:11:32 0/0:0:0:0:0:50:0%:92:1E0:43:50:31:19:55 0/0:0:0:0:0:55:0%:99:1E0:43:55:35:20:56 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:38:1:1:0:38:2.63%:58:5E-1:43:37:23:14:39 0/0:0:0:0:0:19:0%:37:1E0:39:19:13:6:19 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:20:11:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:27:15:44 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:21 0/0:39:1:0:1:30:3.33%:44:5E-1:42:29:17:12:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:49:1:0:1:33:3.03%:52:5E-1:38:32:19:13:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:24:9:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:44:0%:81:1E0:41:44:27:17:45 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:38:2:2:0:38:5.26%:50:2.4667E-1:39:36:26:10:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:30 0/0:0:0:0:0:44:0%:81:1E0:43:44:27:17:46 0/0:45:2:1:1:59:3.39%:88:2.4786E-1:43:57:31:26:60 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:50:0%:92:1E0:44:50:34:16:50 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:16 0/0:0:0:0:0:14:0%:25:1E0:44:14:7:7:15 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:39 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:42 0/0:35:1:1:0:18:5.56%:24:5E-1:43:17:9:8:18 0/0:38:1:1:0:30:3.33%:44:5E-1:41:29:16:13:30 0/0:60:1:0:1:39:2.56%:62:5E-1:43:38:24:14:40 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:30:1:0:1:40:2.5%:62:5E-1:43:39:24:15:43 0/0:0:0:0:0:37:0%:70:1E0:40:37:24:13:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:42 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:21 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:28 0/0:0:0:0:0:22:0%:40:1E0:38:22:17:5:24 0/0:0:0:0:0:17:0%:33:1E0:38:17:12:5:18 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:30 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:20 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:42 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:25:9:37 0/0:38:1:1:0:38:2.63%:58:5E-1:38:37:18:19:38 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:19 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:26 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:0:0:0:0:20:0%:36:1E0:40:20:17:3:21 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:35:0%:67:1E0:38:35:26:9:36 0/0:0:0:0:0:44:0%:81:1E0:38:44:29:15:44 0/0:0:0:0:0:22:0%:40:1E0:36:22:14:8:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:24:13:38 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:37 0/0:0:0:0:0:21:0%:40:1E0:36:21:17:4:21 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:18 0/0:0:0:0:0:35:0%:67:1E0:38:35:21:14:36 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:23 0/0:0:0:0:0:33:0%:63:1E0:37:33:22:11:33 0/0:0:0:0:0:25:0%:48:1E0:36:25:17:8:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:43:0%:82:1E0:38:43:24:19:48 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:34 0/0:0:0:0:0:33:0%:63:1E0:36:33:23:10:34 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:36 0/1:37:8:8:0:44:18.18%:25:2.7573E-3:41:36:23:13:45 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:38:1:1:0:50:2%:80:5E-1:38:49:33:16:51 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:32 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:48 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:31:0%:59:1E0:37:31:19:12:31 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:39 0/0:36:4:4:0:30:13.33%:26:5.62E-2:37:26:15:11:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:28 0/0:0:0:0:0:43:0%:82:1E0:41:43:25:18:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:27:14:45 MTB_anc 1888128 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|pks9_Rv1664|gene1702|transcript|Transcript_gene1702|Coding|1/1|c.103A>G|p.Thr35Ala|103/3054|103/3054|35/1017||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1888128A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1888128A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 1/1:51:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:13:17:31:96.77%:99:6.8754E-17:39:1:0:1:33 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:61:24:37:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:53:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:19:9:10:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:53:33:15:18:35:94.29%:99:1.2301E-18:60:1:0:1:35 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:23:13:10:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:32:15:17:33:96.97%:99:4.7095E-18:33:1:1:0:33 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:45:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:29:11:18:30:96.67%:99:2.6212E-16:37:1:0:1:31 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 MTB_anc 1889073 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|pks9_Rv1664|gene1702|transcript|Transcript_gene1702|Coding|1/1|c.1048C>G|p.Pro350Ala|1048/3054|1048/3054|350/1017||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1889073C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1889073C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:52:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:17:10:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:61:24:37:61:100%:99:2.609E-36:0:0:0:0:62 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:35:15:20:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:43:18:25:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 1894037 . G A . PASS AC=18;AF=0.060;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1894037G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1894037G>A||||||,A|intragenic_variant|MODIFIER|Rv1667c_Rv1667c|gene1705|gene_variant|gene1705|||n.1894037G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:38:49:25:24:51 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:21 0/0:0:0:0:0:44:0%:81:1E0:38:44:25:19:44 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:18 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:14:0%:25:1E0:38:14:10:4:14 0/0:0:0:0:0:29:0%:55:1E0:38:29:20:9:30 0/0:0:0:0:0:14:0%:25:1E0:39:14:10:4:15 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:33 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:47:0%:89:1E0:37:47:27:20:48 0/0:0:0:0:0:15:0%:29:1E0:42:15:10:5:15 0/0:0:0:0:0:43:0%:82:1E0:37:43:23:20:43 0/0:0:0:0:0:8:0%:14:1E0:38:8:5:3:10 0/0:0:0:0:0:23:0%:44:1E0:36:23:16:7:24 0/0:0:0:0:0:21:0%:40:1E0:36:21:15:6:22 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:9:0%:18:1E0:39:9:6:3:11 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:17 0/0:0:0:0:0:54:0%:99:1E0:38:54:33:21:57 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:22 0/0:0:0:0:0:29:0%:55:1E0:37:29:22:7:29 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:11:0%:22:1E0:40:11:5:6:11 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:16 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:21:0%:40:1E0:39:21:16:5:21 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:20 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:34 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:20 0/0:0:0:0:0:31:0%:59:1E0:38:31:23:8:31 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:31 0/0:0:0:0:0:54:0%:99:1E0:39:54:35:19:54 0/0:0:0:0:0:42:0%:77:1E0:37:42:31:11:44 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:36 0/0:0:0:0:0:31:0%:59:1E0:37:31:17:14:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:30 0/0:0:0:0:0:14:0%:25:1E0:37:14:9:5:17 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:24 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:21:5:26 0/0:0:0:0:0:39:0%:74:1E0:38:39:20:19:40 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:28 0/0:0:0:0:0:37:0%:70:1E0:38:37:21:16:37 0/0:0:0:0:0:13:0%:25:1E0:40:13:8:5:14 0/0:0:0:0:0:34:0%:62:1E0:39:34:25:9:35 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:22 0/0:0:0:0:0:24:0%:44:1E0:38:24:16:8:25 0/0:0:0:0:0:28:0%:51:1E0:36:28:16:12:29 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:44 0/0:0:0:0:0:28:0%:51:1E0:37:28:19:9:31 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:35 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:32 0/0:0:0:0:0:29:0%:55:1E0:36:29:18:11:30 0/0:0:0:0:0:34:0%:62:1E0:37:34:23:11:35 0/0:0:0:0:0:20:0%:36:1E0:36:20:15:5:21 0/0:0:0:0:0:35:0%:67:1E0:36:35:18:17:35 0/0:0:0:0:0:56:0%:99:1E0:38:56:31:25:57 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:20 0/0:0:0:0:0:34:0%:62:1E0:38:34:23:11:36 0/0:0:0:0:0:17:0%:33:1E0:45:17:11:6:17 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:19:7:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:30 0/0:0:0:0:0:13:0%:25:1E0:43:13:3:10:14 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:37:0%:70:1E0:37:37:19:18:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:28 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:26:0%:47:1E0:38:26:19:7:28 0/0:37:1:1:0:24:4.17%:34:5E-1:37:23:13:10:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:37:34:23:11:34 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:21 0/0:0:0:0:0:17:0%:33:1E0:37:17:12:5:19 0/0:0:0:0:0:24:0%:44:1E0:37:24:20:4:26 0/0:37:1:1:0:20:5%:27:5E-1:40:19:11:8:20 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:23 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:37 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:38:0%:70:1E0:36:38:27:11:38 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:25 0/0:0:0:0:0:43:0%:82:1E0:39:43:25:18:43 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:17 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:18 0/0:39:1:1:0:29:3.45%:45:5E-1:38:28:15:13:29 0/0:0:0:0:0:36:0%:66:1E0:36:36:25:11:36 0/0:0:0:0:0:23:0%:44:1E0:36:23:14:9:23 0/0:0:0:0:0:25:0%:48:1E0:40:25:18:7:26 0/0:0:0:0:0:31:0%:59:1E0:35:31:18:13:32 0/0:0:0:0:0:32:0%:59:1E0:36:32:21:11:34 0/0:0:0:0:0:22:0%:40:1E0:36:22:14:8:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:30 0/0:0:0:0:0:25:0%:48:1E0:40:25:18:7:26 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:26 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:21 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:25:0%:48:1E0:37:25:20:5:26 0/0:0:0:0:0:34:0%:62:1E0:37:34:20:14:37 0/0:0:0:0:0:26:0%:47:1E0:36:26:17:9:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:26 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:21 0/0:0:0:0:0:53:0%:99:1E0:37:53:33:20:56 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:44 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:19 0/0:0:0:0:0:22:0%:40:1E0:36:22:17:5:22 0/0:0:0:0:0:29:0%:55:1E0:36:29:21:8:33 0/0:0:0:0:0:27:0%:52:1E0:36:27:18:9:30 0/0:0:0:0:0:46:0%:85:1E0:35:46:35:11:48 0/0:0:0:0:0:30:0%:55:1E0:36:30:16:14:34 0/0:0:0:0:0:37:0%:70:1E0:37:37:20:17:46 0/0:0:0:0:0:23:0%:44:1E0:36:23:16:7:24 0/0:0:0:0:0:40:0%:74:1E0:36:40:24:16:41 0/0:0:0:0:0:29:0%:55:1E0:37:29:18:11:31 0/0:0:0:0:0:37:0%:70:1E0:36:37:29:8:39 0/0:0:0:0:0:32:0%:59:1E0:36:32:25:7:37 0/0:36:1:1:0:33:3.03%:52:5E-1:36:32:24:8:36 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:31 0/0:0:0:0:0:24:0%:44:1E0:37:24:15:9:25 0/0:0:0:0:0:34:0%:62:1E0:38:34:24:10:35 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:34 0/0:0:0:0:0:32:0%:59:1E0:37:32:24:8:33 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:27 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:21 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:34 0/0:0:0:0:0:26:0%:47:1E0:36:26:14:12:26 0/0:0:0:0:0:11:0%:22:1E0:40:11:4:7:12 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:39 0/0:0:0:0:0:30:0%:55:1E0:38:30:24:6:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:30 MTB_anc 1894300 . G GGTCTTGCCGC . PASS AC=238;AF=0.793;AN=300;ANN=GGTCTTGCCGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1894300_1894301insGTCTTGCCGC||||||,GGTCTTGCCGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1894300_1894301insGTCTTGCCGC||||||,GGTCTTGCCGC|intragenic_variant|MODIFIER|Rv1667c_Rv1667c|gene1705|gene_variant|gene1705|||n.1894300_1894301insGTCTTGCCGC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:46:22:24:49:92%:99:1.9036E-25:37:2:0:2:50 1/1:50:12:5:7:13:92.31%:58:1.3461E-6:38:1:0:1:13 1/1:46:53:22:31:58:91.38%:99:3.3697E-28:41:4:1:3:58 0/1:49:16:7:9:19:84.21%:76:2.0936E-8:37:2:1:1:19 1/1:43:18:8:10:19:94.74%:92:5.6585E-10:38:1:0:1:19 1/1:43:25:13:12:24:96.15%:99:5.4444E-14:37:1:1:0:26 0/1:47:21:11:10:24:87.5%:99:3.6437E-11:48:2:2:0:24 0/1:43:17:7:10:19:85%:78:1.2848E-8:36:3:2:1:20 0/1:47:18:10:8:21:85.71%:92:5.6585E-10:37:1:0:1:21 1/1:45:27:13:14:30:90%:99:4.6134E-14:45:3:1:2:30 0/1:49:19:11:8:22:86.36%:93:4.7003E-10:38:2:1:1:22 0/1:41:39:19:20:43:88.64%:99:7.2647E-20:39:5:2:3:44 1/1:47:14:10:4:14:93.33%:69:1.0315E-7:60:1:0:1:15 1/1:44:47:24:23:51:92.16%:99:2.3219E-25:45:3:1:2:51 0/1:43:22:14:8:26:84.62%:99:5.5261E-11:41:4:2:2:26 1/1:41:30:20:10:33:90.91%:99:9.89E-16:37:3:0:3:33 0/1:44:24:13:11:29:82.76%:99:7.6222E-13:37:2:1:1:30 1/1:43:22:15:7:24:91.67%:99:1.0078E-11:37:2:2:0:24 1/1:44:26:16:10:28:92.86%:99:1.4382E-14:38:1:0:1:28 1/1:47:22:13:9:22:95.65%:99:4.7526E-13:0:0:0:0:23 0/1:43:22:10:12:25:88%:99:1.0078E-11:35:2:1:1:25 1/1:42:45:20:25:49:90%:99:3.2362E-24:43:3:2:1:49 0/1:45:18:14:4:21:85.71%:87:1.6758E-9:49:2:2:0:21 0/1:46:23:13:10:26:88.46%:99:2.7767E-12:33:2:2:0:26 1/1:43:27:16:11:29:93.1%:99:1.5465E-14:31:2:1:1:29 0/1:49:10:7:3:16:62.5%:39:1.2413E-4:46:6:4:2:16 0/1:46:22:12:10:25:88%:99:2.5916E-11:37:3:1:2:25 0/1:44:17:9:8:21:80.95%:78:1.2848E-8:43:3:0:3:21 1/1:43:19:8:11:19:90.48%:98:1.5234E-10:34:1:1:0:21 1/1:46:37:14:23:39:94.87%:99:5.6582E-21:37:1:0:1:39 0/1:43:34:18:16:38:87.18%:99:3.9902E-17:38:5:2:3:39 1/1:43:31:19:12:32:96.88%:99:1.8007E-17:38:1:1:0:32 0/1:50:19:8:11:23:82.61%:89:1.0931E-9:52:3:2:1:23 1/1:42:22:12:10:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:47:19:7:12:20:95%:99:2.8292E-11:0:0:0:0:20 0/1:44:24:13:11:27:88.89%:99:2.0853E-12:43:3:2:1:27 1/1:46:31:13:18:34:91.18%:99:2.7308E-16:43:3:1:2:34 0/1:46:41:26:15:48:85.42%:99:3.1535E-20:44:7:4:3:48 1/1:43:45:32:13:48:93.75%:99:1.1441E-25:25:1:1:0:49 1/1:44:40:19:21:43:93.02%:99:2.287E-21:45:3:2:1:43 1/1:42:34:18:16:35:97.14%:99:3.2089E-19:33:1:0:1:35 0/1:46:26:14:12:29:89.66%:99:1.6496E-13:37:3:2:1:29 1/1:37:19:6:13:20:90.48%:98:1.5234E-10:37:1:1:0:21 1/1:43:22:11:11:23:95.65%:99:2.9149E-12:37:1:0:1:23 0/1:43:31:19:12:36:86.11%:99:7.3316E-16:33:4:2:2:36 0/1:40:30:21:9:35:83.33%:99:9.89E-16:45:3:2:1:36 1/1:38:24:16:8:25:92.31%:99:7.6222E-13:31:2:2:0:26 0/1:42:34:17:17:37:89.47%:99:5.6582E-18:37:3:2:1:38 0/1:43:24:15:9:27:88.89%:99:2.0853E-12:35:3:2:1:27 0/1:42:28:14:14:34:82.35%:99:6.9527E-14:42:5:2:3:34 0/1:50:21:14:7:26:80.77%:99:9.0704E-11:52:3:2:1:26 1/1:43:37:21:16:40:92.5%:99:1.1479E-19:37:3:2:1:40 1/1:44:22:8:14:24:91.67%:99:2.9149E-12:38:1:1:0:24 1/1:45:25:15:10:27:92.59%:99:5.4444E-14:38:1:0:1:27 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:16:21:37:94.87%:99:5.6582E-21:37:1:1:0:40 0/1:39:22:13:9:24:88%:99:1.0078E-11:38:2:0:2:26 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:36:10:26:40:90%:99:4.2179E-19:35:3:3:0:40 1/1:46:30:12:18:33:90.91%:99:9.89E-16:52:3:2:1:33 0/1:43:35:22:13:40:85.37%:99:2.5278E-17:40:6:2:4:41 1/1:42:44:24:20:46:95.65%:99:2.7459E-24:36:2:1:1:46 0/1:43:32:16:16:36:88.89%:99:7.5196E-17:37:3:2:1:36 1/1:47:23:15:8:24:92%:99:7.7525E-13:38:1:1:0:25 1/1:45:34:14:20:36:94.44%:99:1.5887E-18:33:2:2:0:36 1/1:46:52:21:31:56:91.23%:99:1.2485E-27:35:4:3:1:57 1/1:43:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:41:27:14:44:91.11%:99:1.4915E-22:55:2:1:1:45 1/1:44:19:11:8:21:90.48%:98:1.5234E-10:60:1:1:0:21 0/1:44:11:2:9:14:73.33%:47:1.6951E-5:37:3:3:0:14 0/1:47:17:10:7:22:77.27%:76:2.3502E-8:52:4:3:1:22 0/1:52:21:9:12:25:84%:99:9.0704E-11:44:3:2:1:25 1/1:56:11:5:6:12:91.67%:53:4.8074E-6:39:1:1:0:12 1/1:51:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 0/1:42:33:17:16:38:86.84%:99:2.0653E-17:44:3:1:2:38 0/1:44:22:11:11:27:81.48%:99:5.5261E-11:38:4:3:1:27 0/1:42:19:10:9:22:82.61%:86:2.1316E-9:40:4:3:1:23 0/1:47:18:9:9:22:81.82%:87:1.6758E-9:49:2:1:1:22 0/1:39:24:13:11:27:88.89%:99:2.0853E-12:45:3:1:2:27 0/1:43:28:14:14:32:87.5%:99:1.2857E-14:37:3:1:2:32 1/1:41:29:17:12:29:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:41:23:12:11:24:95.83%:99:7.7525E-13:33:1:1:0:24 0/1:42:30:13:17:32:88.24%:99:9.89E-16:44:3:2:1:34 1/1:48:26:16:10:27:96.3%:99:1.4382E-14:38:1:0:1:27 0/1:45:18:8:10:22:81.82%:84:3.7603E-9:37:3:1:2:22 0/1:42:23:13:10:26:88.46%:99:2.7767E-12:35:2:0:2:26 0/1:40:25:12:13:28:86.21%:99:5.8768E-13:43:3:2:1:29 0/1:43:11:3:8:12:84.62%:53:4.8074E-6:38:1:0:1:13 1/1:44:31:16:15:33:93.94%:99:8.2416E-17:32:2:1:1:33 1/1:49:25:13:12:25:96.15%:99:5.4444E-14:33:1:1:0:26 1/1:45:28:15:13:31:90.32%:99:1.2857E-14:36:3:0:3:31 1/1:46:15:7:8:16:93.75%:75:2.8282E-8:37:1:0:1:16 1/1:39:35:14:21:36:97.22%:99:8.3613E-20:60:1:1:0:36 0/1:45:30:17:13:36:83.33%:99:2.5943E-15:43:4:2:2:36 1/1:44:41:18:23:44:93.18%:99:1.4915E-22:47:2:1:1:44 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:20:12:8:22:90.91%:99:4.0873E-11:38:1:1:0:22 1/1:45:24:13:11:26:92.31%:99:2.0568E-13:37:1:0:1:26 1/1:42:31:16:15:34:91.18%:99:8.2416E-17:37:2:1:1:34 0/1:40:31:15:16:40:75.61%:99:3.4914E-15:36:6:5:1:41 1/1:39:20:11:9:20:95.24%:99:4.0873E-11:37:1:1:0:21 0/1:43:42:24:18:48:87.5%:99:4.0135E-21:35:6:4:2:48 1/1:41:28:12:16:30:93.33%:99:9.9776E-16:60:1:1:0:30 1/1:45:24:12:12:25:96%:99:2.0568E-13:32:1:1:0:25 1/1:41:20:9:11:22:90.91%:99:7.2544E-12:0:0:0:0:22 0/1:48:17:11:6:19:89.47%:82:5.9414E-9:38:2:1:1:19 1/1:51:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 0/1:42:34:14:20:38:89.47%:99:1.6239E-17:43:4:2:2:38 1/1:41:25:16:9:27:92.59%:99:2.0853E-13:33:2:1:1:27 1/1:46:25:10:15:27:92.59%:99:2.0853E-13:37:2:1:1:27 1/1:45:34:19:15:36:94.44%:99:1.5887E-18:36:2:2:0:36 0/1:43:26:8:18:29:89.66%:99:1.6496E-13:36:3:3:0:29 1/1:37:17:8:9:17:94.44%:86:2.0936E-9:37:1:1:0:18 0/1:45:20:11:9:25:80%:95:3.1579E-10:44:3:2:1:25 0/1:38:34:19:15:41:82.93%:99:8.7127E-17:36:6:4:2:41 1/1:40:38:13:25:40:92.68%:99:8.0088E-21:38:2:0:2:41 0/1:39:31:14:17:37:81.58%:99:7.3316E-16:37:4:2:2:38 1/1:43:33:21:12:35:91.67%:99:5.9366E-18:37:2:0:2:36 1/1:40:25:14:11:24:100%:99:7.9107E-15:0:0:0:0:25 0/1:41:51:25:26:57:89.47%:99:4.6193E-27:42:4:2:2:57 1/1:43:37:16:21:39:94.87%:99:3.0128E-20:37:2:2:0:39 1/1:41:21:8:13:23:91.3%:99:3.6437E-11:48:2:2:0:23 1/1:42:21:7:14:22:95.45%:99:1.0931E-11:39:1:1:0:22 1/1:41:36:19:17:39:92.31%:99:4.2179E-19:37:3:3:0:39 0/1:39:24:15:9:26:88.89%:99:2.0853E-12:35:3:2:1:27 1/1:42:38:21:17:41:90.48%:99:3.1178E-20:35:3:2:1:42 1/1:38:30:13:17:31:93.75%:99:3.0612E-16:37:2:0:2:32 1/1:40:36:16:20:38:92.31%:99:4.2179E-19:31:3:3:0:40 1/1:39:32:18:14:33:94.12%:99:2.2142E-17:37:2:1:1:34 1/1:40:44:26:18:45:95.65%:99:3.8097E-26:0:0:0:0:46 1/1:39:28:20:8:30:90.32%:99:9.9776E-16:38:1:0:1:31 0/1:40:24:12:12:33:72.73%:99:2.7115E-11:37:7:4:3:33 0/1:40:23:10:13:25:88.46%:99:7.3681E-12:36:3:1:2:26 0/1:41:39:18:21:44:86.67%:99:7.2647E-20:35:5:1:4:45 1/1:38:25:14:11:27:92.59%:99:2.0853E-13:30:2:1:1:27 0/1:38:22:12:10:26:81.48%:99:2.5916E-11:33:3:0:3:27 1/1:39:50:26:24:52:96.15%:99:1.3013E-28:28:1:1:0:52 0/1:41:30:9:21:34:88.24%:99:2.5943E-15:36:4:2:2:35 1/1:41:30:15:15:33:90.91%:99:9.89E-16:35:3:2:1:33 0/1:42:25:13:12:29:86.21%:99:5.8768E-13:37:3:2:1:29 1/1:43:42:21:21:45:93.33%:99:3.9431E-23:46:2:2:0:45 1/1:39:27:11:16:28:96.43%:99:3.7915E-15:37:1:1:0:28 0/1:44:21:12:9:26:80.77%:94:3.4262E-10:37:5:3:2:26 1/1:47:24:10:14:25:96%:99:2.0568E-13:38:1:0:1:25 1/1:44:26:15:11:26:96.3%:99:2.0165E-15:0:0:0:0:27 0/1:43:10:8:2:12:83.33%:44:3.3652E-5:35:2:0:2:12 0/1:42:22:9:13:26:84.62%:99:5.5261E-11:43:4:1:3:26 1/1:43:36:18:18:39:92.31%:99:1.1316E-19:47:2:0:2:39 1/1:41:45:28:17:50:90%:99:3.448E-23:35:5:3:2:51 1/1:37:38:22:16:41:90.48%:99:8.0088E-21:31:2:1:1:42 MTB_anc 1900800 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|cmr_Rv1675c|gene1712|transcript|Transcript_gene1712|Coding|1/1|c.176C>T|p.Ala59Val|176/735|176/735|59/244||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1900800G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.1900800G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:68:31:37:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:63:31:32:63:100%:99:1.657E-37:0:0:0:0:66 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:24:10:14:25:100%:99:3.101E-14:0:0:0:0:26 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:65:34:31:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:61:31:30:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:61:35:26:61:100%:99:2.609E-36:0:0:0:0:61 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 MTB_anc 1906336 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|moeX_Rv1681-Rv1682_Rv1682|gene1718-gene1719|intergenic_region|gene1718-gene1719|||n.1906336G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:45:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:46:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:59:38:21:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:14:13:28:96.43%:99:3.7915E-15:60:1:1:0:29 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:73:45:28:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:43:33:10:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:49:32:17:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:40:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:41:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:21:21:43:97.67%:99:6.6289E-24:60:1:1:0:43 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 MTB_anc 1908521 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv1683_Rv1683|gene1720|transcript|Transcript_gene1720|Coding|1/1|c.928G>T|p.Asp310Tyr|928/3000|928/3000|310/999||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1908521G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1908521G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:45:41:13:28:41 0/0:0:0:0:0:21:0%:40:1E0:45:21:15:6:21 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:44 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:25:18:45 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:40 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:51:30:11:19:30 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:52 0/0:0:0:0:0:13:0%:25:1E0:47:13:9:4:13 0/0:0:0:0:0:57:0%:99:1E0:44:57:34:23:57 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:33 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:20 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:47:32:23:9:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:50 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:60:1:0:1:43:2.33%:70:5E-1:45:42:24:18:43 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:47:0%:89:1E0:46:47:26:21:47 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:23:0%:44:1E0:53:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:41 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:26 0/0:0:0:0:0:54:0%:99:1E0:46:54:33:21:56 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:43 0/0:0:0:0:0:50:0%:92:1E0:48:50:26:24:50 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:47 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:24:8:32 0/0:0:0:0:0:51:0%:97:1E0:43:51:28:23:51 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:40 0/0:0:0:0:0:24:0%:44:1E0:51:24:15:9:25 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:47 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:39 0/0:0:0:0:0:21:0%:40:1E0:39:21:13:8:21 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:51 0/0:0:0:0:0:47:0%:89:1E0:48:47:22:25:47 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:40 0/0:0:0:0:0:44:0%:81:1E0:45:44:29:15:44 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:44 0/0:0:0:0:0:51:0%:97:1E0:48:51:26:25:52 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:22:0%:40:1E0:51:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:34 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:14:0%:25:1E0:51:14:6:8:14 0/0:0:0:0:0:42:0%:77:1E0:49:42:19:23:42 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:21 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:28 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:51:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:36 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:24 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:27:0%:52:1E0:52:27:18:9:27 0/0:0:0:0:0:48:0%:89:1E0:42:48:31:17:50 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:46 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:39:1:1:0:42:2.38%:66:5E-1:43:41:14:27:42 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:60:1:1:0:42:2.38%:66:5E-1:45:41:19:22:44 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:36 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 0/0:0:0:0:0:51:0%:97:1E0:43:51:19:32:52 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:57:0%:99:1E0:43:57:26:31:57 0/0:0:0:0:0:55:0%:99:1E0:41:55:32:23:56 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:53:0%:99:1E0:38:53:30:23:55 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:49 0/0:0:0:0:0:55:0%:99:1E0:38:55:32:23:59 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:50 0/0:0:0:0:0:52:0%:96:1E0:39:52:24:28:52 0/0:0:0:0:0:45:0%:85:1E0:42:45:29:16:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:45 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:47 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:44 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:44 0/0:0:0:0:0:70:0%:99:1E0:38:70:27:43:71 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:48 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:31 0/0:0:0:0:0:15:0%:29:1E0:37:15:10:5:16 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:62:0%:99:1E0:42:62:30:32:63 0/0:38:1:1:0:49:2.04%:80:5E-1:39:48:28:20:50 0/0:20:1:1:0:49:2.04%:80:5E-1:42:48:21:27:50 MTB_anc 1917190 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|missense_variant|MODERATE|Rv1692_Rv1692|gene1730|transcript|Transcript_gene1730|Coding|1/1|c.493G>A|p.Gly165Ser|493/1062|493/1062|165/353||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1917190G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1917190G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:54:36:18:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:54:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:60:0%:99:1E0:46:60:34:26:60 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:17:0%:33:1E0:37:17:12:5:17 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:21 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 1/1:44:35:17:18:36:97.22%:99:8.3613E-20:60:1:0:1:36 1/1:47:35:24:11:36:97.22%:99:8.3613E-20:60:1:1:0:37 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:18:0%:32:1E0:43:18:12:6:18 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 1/1:42:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:36 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:22:11:33 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:21:0%:40:1E0:45:21:16:5:21 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:33 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:46 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:25:0%:48:1E0:47:25:18:7:25 0/0:0:0:0:0:45:0%:85:1E0:45:45:30:15:45 0/0:0:0:0:0:51:0%:97:1E0:46:51:30:21:53 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:39 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:24:0%:44:1E0:50:24:14:10:24 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:27 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:47 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:45:0%:85:1E0:40:45:30:15:45 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:36 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:20 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 1/1:49:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:38:0%:70:1E0:39:38:24:14:38 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 0/0:0:0:0:0:18:0%:32:1E0:40:18:15:3:19 0/0:0:0:0:0:39:0%:74:1E0:47:39:19:20:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:23:11:36 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 0/0:0:0:0:0:40:0%:74:1E0:38:40:26:14:40 0/0:0:0:0:0:54:0%:99:1E0:42:54:30:24:54 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:27 0/0:0:0:0:0:30:0%:55:1E0:36:30:19:11:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:19:6:26 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:30 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:29 0/0:39:1:1:0:28:3.57%:41:5E-1:39:27:21:6:28 1/1:37:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:34:15:19:35:97.14%:99:3.2089E-19:60:1:0:1:35 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:25:6:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 1/1:39:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 1920120 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|recN_Rv1696|gene1734|transcript|Transcript_gene1734|Coding|1/1|c.438T>G|p.Pro146Pro|438/1764|438/1764|146/587||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1920120T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.1920120T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:67:24:43:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:21:5:16:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:38:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:24:9:15:25:96%:99:2.0568E-13:60:1:1:0:26 1/1:46:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:47:14:33:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:13:6:7:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:42:66:21:45:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:53:15:38:54:98.15%:99:2.2126E-30:38:1:0:1:55 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:38:13:25:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:48:12:36:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:39:14:25:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:50:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:60:14:46:60:100%:99:1.035E-35:0:0:0:0:61 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:50:8:42:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:10:22:33:96.97%:99:4.7095E-18:33:1:0:1:33 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:54:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:8:17:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:19:7:12:20:95%:98:1.5234E-10:36:1:1:0:20 1/1:38:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:36:8:28:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:50:15:35:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:37:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:40:8:32:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 1924959 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|pyrG_Rv1699|gene1737|transcript|Transcript_gene1737|Coding|1/1|c.1131C>T|p.Gly377Gly|1131/1761|1131/1761|377/586||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1924959C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1924959C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:52:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:53:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:21:13:8:22:95.45%:99:1.0931E-11:38:1:1:0:22 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:50:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:58:36:22:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:39:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:53 1/1:40:36:20:16:37:97.3%:99:2.2598E-21:0:0:0:0:42 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:65:38:27:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 1930028 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|cycA_Rv1704c|gene1742|transcript|Transcript_gene1742|Coding|1/1|c.1429C>G|p.Arg477Gly|1429/1671|1429/1671|477/556||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1930028G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1930028G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cycloserine|||n.1930028G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:62:33:29:63:98.41%:99:6.5755E-37:0:0:0:0:64 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:16:9:7:17:94.12%:81:7.7134E-9:39:1:0:1:18 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:52:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:63:29:34:63:100%:99:1.657E-37:0:0:0:0:64 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:71:37:34:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:45:55:37:18:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:27:10:17:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:38 MTB_anc 1931470 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cycloserine|||n.1931470A>G||||||,G|intergenic_region|MODIFIER|cycA_Rv1704c-PPE22_Rv1705c|gene1742-gene1743|intergenic_region|gene1742-gene1743|||n.1931470A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:20:9:11:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:35:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:29:14:15:30:96.67%:99:2.6212E-16:20:1:1:0:30 1/1:37:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:20:7:13:22:90.91%:99:4.0873E-11:38:1:0:1:22 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 1931718 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|PPE22_Rv1705c|gene1743|transcript|Transcript_gene1743|Coding|1/1|c.937G>C|p.Val313Leu|937/1158|937/1158|313/385||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cycloserine|||n.1931718C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1931718C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1931718C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:21:14:7:22:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:36:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:35:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:14:20:36:94.44%:99:3.5146E-20:0:0:0:0:36 1/1:42:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:35:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:35:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:36:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 1935695 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1707_Rv1707|gene1746|transcript|Transcript_gene1746|Coding|1/1|c.814G>T|p.Ala272Ser|814/1461|814/1461|272/486||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1935695G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1935695G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:48:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:14:16:31:96.77%:99:8.4556E-18:0:0:0:0:33 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:66:36:30:67:98.51%:99:2.6498E-39:0:0:0:0:68 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:18:9:9:19:94.74%:99:1.1019E-10:0:0:0:0:21 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:37:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:44 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:39:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:38:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:36:19:17:37:97.3%:99:2.1762E-20:29:1:0:1:39 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 MTB_anc 1936525 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1708_Rv1708|gene1747|transcript|Transcript_gene1747|Coding|1/1|c.166A>G|p.Thr56Ala|166/957|166/957|56/318||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1936525A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1936525A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:55:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:48:17:31:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:70:38:32:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:24:18:6:24:100%:99:3.101E-14:0:0:0:0:26 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:66:36:30:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:41:60:31:29:60:100%:99:1.035E-35:0:0:0:0:62 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 1939299 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|Rv1711_Rv1711|gene1750|transcript|Transcript_gene1750|Coding|1/1|c.462G>C|p.Thr154Thr|462/765|462/765|154/254||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1939299G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1939299G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:43:52:30:22:52 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:32:1:0:1:48:2.08%:76:5E-1:47:47:26:21:48 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:26 0/0:20:1:1:0:25:4%:38:5E-1:46:24:16:8:25 0/0:39:1:1:0:23:4.35%:34:5E-1:45:22:12:10:23 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:18:0%:32:1E0:48:18:14:4:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:35:0%:67:1E0:50:35:16:19:36 0/0:0:0:0:0:27:0%:52:1E0:51:27:12:15:27 0/0:0:0:0:0:41:0%:78:1E0:48:41:25:16:41 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:51:0%:97:1E0:47:51:24:27:52 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:22 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:23 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:49 0/0:60:1:1:0:28:3.57%:41:5E-1:45:27:15:12:28 0/0:0:0:0:0:48:0%:89:1E0:45:48:30:18:48 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:15:0%:29:1E0:47:15:11:4:15 0/0:0:0:0:0:18:0%:32:1E0:45:18:12:6:18 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:29 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:42 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:43 0/0:0:0:0:0:60:0%:99:1E0:49:60:30:30:60 0/0:0:0:0:0:45:0%:85:1E0:48:45:25:20:45 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:41:0%:78:1E0:45:41:29:12:41 0/0:60:1:1:0:47:2.13%:77:5E-1:43:46:22:24:47 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:39:1:0:1:43:2.33%:70:5E-1:42:42:19:23:45 0/0:0:0:0:0:47:0%:89:1E0:46:47:26:21:48 0/0:0:0:0:0:50:0%:92:1E0:47:50:21:29:50 0/0:0:0:0:0:16:0%:29:1E0:50:16:11:5:16 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:26 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:16:0%:29:1E0:42:16:5:11:16 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:36 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:34 0/0:0:0:0:0:47:0%:89:1E0:45:47:28:19:47 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:55:0%:99:1E0:47:55:27:28:56 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:16:0%:29:1E0:49:16:10:6:16 0/0:49:2:2:0:31:6.45%:40:2.459E-1:46:29:16:13:31 0/0:0:0:0:0:42:0%:77:1E0:49:42:21:21:42 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:50:29:16:13:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:39:1:1:0:38:2.63%:58:5E-1:45:37:17:20:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:35 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:35 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:18 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:40 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:47 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:26 0/0:0:0:0:0:35:0%:67:1E0:47:35:12:23:35 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:50 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:34 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:39:0%:74:1E0:45:39:15:24:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:35 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:33 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:61:0%:99:1E0:42:61:36:25:62 0/0:0:0:0:0:58:0%:99:1E0:43:58:28:30:60 0/0:0:0:0:0:33:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:52 0/0:0:0:0:0:43:0%:82:1E0:42:43:27:16:43 0/0:0:0:0:0:57:0%:99:1E0:40:57:29:28:57 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:42 0/0:0:0:0:0:44:0%:81:1E0:39:44:28:16:47 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:44:0%:81:1E0:44:44:28:16:46 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:42 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:44 0/0:0:0:0:0:33:0%:63:1E0:38:33:12:21:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:39:1:1:0:39:2.56%:62:5E-1:41:38:20:18:40 0/0:0:0:0:0:58:0%:99:1E0:39:58:26:32:59 0/0:0:0:0:0:45:0%:85:1E0:44:45:17:28:46 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:38:1:1:0:42:2.38%:66:5E-1:44:41:15:26:43 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:28 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:53:0%:99:1E0:42:53:23:30:55 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:38 MTB_anc 1939763 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|cmk_Rv1712|gene1751|transcript|Transcript_gene1751|Coding|1/1|c.165A>G|p.Pro55Pro|165/693|165/693|55/230||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1939763A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1939763A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:24:17:7:25:96%:99:2.0568E-13:32:1:0:1:25 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:50:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:67:33:34:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:51:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:61:28:33:61:100%:99:2.609E-36:0:0:0:0:63 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:63:26:37:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:54:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:37:16:21:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:40:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:49:18:31:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:61:32:29:61:100%:99:2.609E-36:0:0:0:0:63 1/1:41:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:52:35:17:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:44:20:24:45:97.78%:99:4.4304E-25:38:1:0:1:45 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:63:32:31:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:43:14:29:44:97.73%:99:1.7144E-24:38:1:0:1:44 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 1940098 . C CG . PASS AC=1;AF=3.333e-03;AN=300;ANN=CG|frameshift_variant|HIGH|cmk_Rv1712|gene1751|transcript|Transcript_gene1751|Coding|1/1|c.503dupG|p.Leu169fs|504/693|504/693|168/230||INFO_REALIGN_3_PRIME,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.1940098_1940099insG||||||,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1940098_1940099insG||||||;HOM=0;LOF=(cmk_Rv1712|gene1751|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:41:45:27:18:46 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:19 0/0:0:0:0:0:41:0%:78:1E0:44:41:26:15:42 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:56:2:2:0:22:9.09%:24:2.4419E-1:39:20:13:7:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:60:1:0:1:28:3.57%:41:5E-1:45:27:15:12:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:41 0/0:0:0:0:0:15:0%:29:1E0:43:15:10:5:15 0/0:37:4:4:0:42:9.52%:43:5.801E-2:42:38:19:19:43 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:16 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:24 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/1:42:7:7:0:44:15.91%:22:6.0363E-3:40:37:20:17:46 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:38:1:1:0:28:3.57%:41:5E-1:42:27:16:11:30 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:35 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:40 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:38 0/0:0:0:0:0:27:0%:52:1E0:36:27:13:14:27 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:23 0/0:49:1:0:1:34:2.94%:51:5E-1:43:33:17:16:36 0/0:0:0:0:0:41:0%:78:1E0:39:41:25:16:42 0/0:0:0:0:0:67:0%:99:1E0:46:67:35:32:70 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:43 0/0:0:0:0:0:51:0%:97:1E0:46:51:26:25:51 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:35 0/0:74:1:1:0:33:3.03%:48:5E-1:42:31:11:20:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:37:1:1:0:44:2.27%:69:5E-1:39:43:24:19:46 0/0:37:3:3:0:37:8.11%:43:1.1986E-1:44:34:19:15:39 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:38:1:1:0:21:4.76%:31:5E-1:40:20:11:9:22 0/0:37:2:2:0:46:4.35%:63:2.4725E-1:39:44:25:19:46 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:24 0/0:0:0:0:0:46:0%:85:1E0:44:46:30:16:47 0/0:38:1:1:0:36:2.78%:55:5E-1:43:35:19:16:38 0/0:38:1:1:0:34:2.94%:51:5E-1:38:33:16:17:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:25 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:50:0%:92:1E0:42:50:31:19:50 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:36:4:4:0:41:9.76%:44:5.79E-2:46:37:16:21:42 0/0:60:1:1:0:53:1.89%:88:5E-1:43:52:23:29:54 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:38:1:1:0:16:6.25%:21:5E-1:39:15:7:8:16 0/0:38:1:1:0:30:3.33%:44:5E-1:41:29:13:16:31 0/0:39:2:0:2:35:5.71%:47:2.4638E-1:42:33:17:16:35 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:33:1:1:0:39:2.56%:62:5E-1:42:38:18:20:40 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:37:1:1:0:36:2.78%:55:5E-1:40:35:16:19:37 0/0:60:1:1:0:26:3.85%:38:5E-1:46:25:16:9:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:19:8:28 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:29 0/0:0:0:0:0:60:0%:99:1E0:41:60:31:29:61 0/0:39:1:0:1:44:2.27%:69:5E-1:44:43:23:20:44 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:24:13:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:19 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:37:2:2:0:22:9.09%:24:2.4419E-1:48:20:13:7:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:37 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:37:1:1:0:44:2.27%:69:5E-1:39:43:22:21:45 0/0:38:1:1:0:29:3.45%:45:5E-1:44:28:14:14:29 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:38:1:1:0:17:5.88%:24:5E-1:46:16:7:9:18 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:40 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:34 0/0:38:1:1:0:33:3.03%:52:5E-1:43:32:12:20:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:33 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:21 0/0:0:0:0:0:31:0%:59:1E0:36:31:12:19:32 0/0:0:0:0:0:51:0%:97:1E0:41:51:29:22:51 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:31 0/0:37:1:1:0:61:1.64%:99:5E-1:38:60:35:25:62 0/0:0:0:0:0:54:0%:99:1E0:43:54:27:27:54 0/0:43:4:4:0:27:14.81%:23:5.5494E-2:41:23:10:13:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:27 0/0:31:1:1:0:46:2.17%:73:5E-1:37:45:19:26:47 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:34 0/0:34:1:1:0:38:2.63%:58:5E-1:40:37:17:20:40 0/0:37:1:1:0:39:2.56%:62:5E-1:35:38:12:26:43 0/0:0:0:0:0:49:0%:93:1E0:38:49:24:25:50 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:42 0/0:0:0:0:0:40:0%:74:1E0:38:40:12:28:40 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:32 0/0:0:0:0:0:34:0%:62:1E0:36:34:15:19:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:37 0/0:0:0:0:0:56:0%:99:1E0:39:56:25:31:57 0/0:38:1:1:0:28:3.57%:41:5E-1:39:27:11:16:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:35 0/0:38:1:1:0:30:3.33%:44:5E-1:42:29:16:13:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:16:5:21 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:38:1:1:0:28:3.57%:41:5E-1:44:27:19:8:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:48 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:49 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:21 MTB_anc 1941222 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|engA_Rv1713|gene1752|transcript|Transcript_gene1752|Coding|1/1|c.935C>T|p.Ala312Val|935/1392|935/1392|312/463||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.1941222C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1941222C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:21:0%:40:1E0:54:21:8:13:21 0/0:0:0:0:0:42:0%:77:1E0:48:42:21:21:43 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:40:0%:74:1E0:50:40:14:26:40 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:40 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:50:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:28 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:50 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:47 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:29 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:55 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:9:21:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:37 0/0:0:0:0:0:25:0%:48:1E0:50:25:15:10:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:64:0%:99:1E0:48:64:28:36:66 0/0:0:0:0:0:48:0%:89:1E0:48:48:26:22:48 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:42 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:17 0/0:0:0:0:0:34:0%:62:1E0:41:34:26:8:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:43 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:46:0%:85:1E0:45:46:28:18:47 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:23 0/0:0:0:0:0:40:0%:74:1E0:47:40:24:16:41 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:25 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:31 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:50 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:42 0/0:0:0:0:0:51:0%:97:1E0:46:51:28:23:52 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:40 0/0:0:0:0:0:52:0%:96:1E0:44:52:32:20:52 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:48 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:23 0/0:33:1:0:1:25:4%:38:5E-1:45:24:14:10:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:39 0/0:0:0:0:0:34:0%:62:1E0:50:34:19:15:34 0/0:0:0:0:0:19:0%:37:1E0:49:19:14:5:19 0/0:0:0:0:0:31:0%:59:1E0:55:31:17:14:31 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:52 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:40 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:26 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:49 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:45:0%:85:1E0:39:45:27:18:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:32 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:41:0%:78:1E0:50:41:19:22:41 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:29 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:52 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:45:35:23:12:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:43 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:27 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:21 0/0:0:0:0:0:40:0%:74:1E0:47:40:15:25:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:43:0%:82:1E0:48:43:28:15:43 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:28:0%:51:1E0:40:28:8:20:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:10:25:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:46 0/0:0:0:0:0:60:0%:99:1E0:44:60:30:30:60 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:51:0%:97:1E0:39:51:27:24:54 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:35 0/0:0:0:0:0:47:0%:89:1E0:43:47:17:30:50 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:34 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:41 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:40 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:40 0/0:0:0:0:0:40:0%:74:1E0:38:40:17:23:42 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:44 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:31 0/0:35:1:1:0:31:3.23%:48:5E-1:42:30:16:14:32 0/0:0:0:0:0:60:0%:99:1E0:36:60:31:29:62 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:46 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:48:0%:89:1E0:41:48:19:29:49 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:22:0%:40:1E0:43:22:16:6:22 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:52 0/0:0:0:0:0:57:0%:99:1E0:41:57:26:31:57 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 MTB_anc 1951838 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|intergenic_region|MODIFIER|Rv1725c_Rv1725c-Rv1726_Rv1726|gene1765-gene1766|intergenic_region|gene1765-gene1766|||n.1951838G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:41:49:21:28:49 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:17 0/0:0:0:0:0:57:0%:99:1E0:47:57:30:27:57 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:16 0/0:0:0:0:0:25:0%:48:1E0:51:25:11:14:25 0/0:0:0:0:0:11:0%:22:1E0:48:11:4:7:11 0/0:0:0:0:0:32:0%:59:1E0:50:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:24:0%:44:1E0:51:24:19:5:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:12:0%:21:1E0:48:12:4:8:12 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:50:0%:92:1E0:46:50:19:31:51 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:34 0/0:57:1:1:0:20:5%:27:5E-1:42:19:8:11:20 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:28 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:42 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:29 0/0:0:0:0:0:23:0%:44:1E0:53:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:48:0%:89:1E0:47:48:25:23:50 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 0/0:0:0:0:0:47:0%:89:1E0:45:47:30:17:48 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:44:0%:81:1E0:46:44:20:24:44 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:20:10:30 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:50:0%:92:1E0:43:50:18:32:50 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:47 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:18:0%:32:1E0:49:18:1:17:19 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:42:0%:77:1E0:47:42:26:16:43 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:46:0%:85:1E0:47:46:18:28:46 0/0:0:0:0:0:46:0%:85:1E0:49:46:21:25:47 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:32 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:38 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:21 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:40 0/0:0:0:0:0:23:0%:44:1E0:51:23:16:7:23 0/0:0:0:0:0:19:0%:37:1E0:48:19:13:6:19 0/0:0:0:0:0:41:0%:78:1E0:48:41:13:28:41 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:41 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:23 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:18:5:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:53:0%:99:1E0:45:53:24:29:53 0/0:0:0:0:0:35:0%:67:1E0:41:35:23:12:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:32:0%:59:1E0:50:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:15:0%:29:1E0:49:15:6:9:15 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:56 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:19 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:40 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:34 0/0:0:0:0:0:49:0%:93:1E0:41:49:29:20:51 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:12:26:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:66:0%:99:1E0:45:66:31:35:66 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:41 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:43 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:43 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:54:0%:99:1E0:40:54:25:29:54 0/0:0:0:0:0:50:0%:92:1E0:43:50:24:26:51 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:46:25:8:17:25 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:42 0/0:0:0:0:0:51:0%:97:1E0:40:51:30:21:51 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 MTB_anc 1952160 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv1726_Rv1726|gene1766|transcript|Transcript_gene1766|Coding|1/1|c.309C>T|p.Thr103Thr|309/1386|309/1386|103/461||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1952160C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1952160C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:36:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:19:12:7:20:95%:98:1.5234E-10:37:1:0:1:21 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:36:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:49 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:34:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:24:14:10:24:100%:99:3.101E-14:0:0:0:0:28 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:35:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:36:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:50 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 MTB_anc 1953766 . A C . PASS AC=4;AF=0.013;AN=300;ANN=C|missense_variant|MODERATE|Rv1727_Rv1727|gene1768|transcript|Transcript_gene1768|Coding|1/1|c.497A>C|p.His166Pro|497/570|497/570|166/189||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1953766A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1953766A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:40:45:18:27:45 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:17 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:51 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:24:0%:44:1E0:39:24:4:20:25 0/0:0:0:0:0:27:0%:52:1E0:39:27:7:20:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:27 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:30 0/0:0:0:0:0:21:0%:40:1E0:46:21:4:17:21 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:48:0%:89:1E0:38:48:20:28:48 0/0:0:0:0:0:14:0%:25:1E0:47:14:7:7:15 0/0:0:0:0:0:41:0%:78:1E0:39:41:16:25:41 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:33:0%:63:1E0:39:33:12:21:34 0/0:0:0:0:0:23:0%:44:1E0:40:23:7:16:23 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:19 0/0:0:0:0:0:18:0%:32:1E0:41:18:5:13:18 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:25 0/0:0:0:0:0:32:0%:59:1E0:40:32:10:22:33 0/0:0:0:0:0:47:0%:89:1E0:39:47:19:28:50 0/0:0:0:0:0:21:0%:40:1E0:44:21:6:15:21 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:40 0/0:0:0:0:0:33:0%:63:1E0:38:33:10:23:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:7:18:25 0/0:0:0:0:0:15:0%:29:1E0:43:15:4:11:15 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:27:0%:52:1E0:39:27:7:20:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:37 0/0:0:0:0:0:51:0%:97:1E0:44:51:24:27:53 0/0:0:0:0:0:38:0%:70:1E0:44:38:10:28:38 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:32 0/0:0:0:0:0:46:0%:85:1E0:39:46:16:30:46 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:17:0%:33:1E0:42:17:5:12:17 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:44:0%:81:1E0:42:44:13:31:44 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:32 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:5:19:24 0/0:0:0:0:0:47:0%:89:1E0:39:47:15:32:49 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:23:0%:44:1E0:38:23:3:20:23 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:44 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:47:0%:89:1E0:43:47:13:34:47 0/0:0:0:0:0:46:0%:85:1E0:39:46:17:29:47 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:21 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:52 0/0:0:0:0:0:26:0%:47:1E0:40:26:8:18:26 0/0:0:0:0:0:46:0%:85:1E0:41:46:13:33:46 0/0:0:0:0:0:27:0%:52:1E0:46:27:8:19:27 0/0:0:0:0:0:18:0%:32:1E0:47:18:4:14:18 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:24 0/0:0:0:0:0:15:0%:29:1E0:43:15:5:10:15 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:39 0/0:0:0:0:0:35:0%:67:1E0:36:35:14:21:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:9:22:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:7:25:34 0/0:0:0:0:0:44:0%:81:1E0:39:44:19:25:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:12:24:37 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:31:0%:59:1E0:40:31:10:21:33 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:5:18:23 0/0:0:0:0:0:43:0%:82:1E0:39:43:15:28:43 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:32 0/0:0:0:0:0:51:0%:97:1E0:39:51:17:34:51 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:25 0/0:0:0:0:0:31:0%:59:1E0:37:31:17:14:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:26 0/0:0:0:0:0:40:0%:74:1E0:38:40:14:26:41 0/0:0:0:0:0:24:0%:44:1E0:39:24:5:19:25 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:27:0%:52:1E0:42:27:7:20:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:31 0/0:0:0:0:0:21:0%:40:1E0:39:21:6:15:21 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:0:0:0:0:49:0%:93:1E0:38:49:21:28:53 0/0:0:0:0:0:32:0%:59:1E0:36:32:14:18:32 0/0:0:0:0:0:48:0%:89:1E0:40:48:22:26:48 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:55 0/0:0:0:0:0:42:0%:77:1E0:38:42:16:26:42 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:29 0/0:0:0:0:0:45:0%:85:1E0:35:45:12:33:45 0/0:0:0:0:0:35:0%:67:1E0:39:35:13:22:36 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:27 0/0:0:0:0:0:33:0%:63:1E0:35:33:15:18:37 0/0:0:0:0:0:28:0%:51:1E0:35:28:13:15:29 0/0:0:0:0:0:49:0%:93:1E0:37:49:16:33:51 0/0:0:0:0:0:29:0%:55:1E0:38:29:8:21:29 0/0:0:0:0:0:42:0%:77:1E0:39:42:11:31:43 0/0:0:0:0:0:49:0%:93:1E0:38:49:16:33:51 0/0:0:0:0:0:44:0%:81:1E0:41:44:9:35:45 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:38:28:8:20:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 0/0:0:0:0:0:48:0%:89:1E0:38:48:21:27:50 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:44 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:37:38:10:28:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:9:20:31 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 0/0:0:0:0:0:40:0%:74:1E0:38:40:13:27:41 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 0/0:0:0:0:0:20:0%:36:1E0:39:20:6:14:21 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:37 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 0/0:0:0:0:0:45:0%:85:1E0:37:45:22:23:45 MTB_anc 1955581 . A AGTCTGATTGCCCGGTTCCTCCTCGCGCCGCAAACGGCGCGCATCGTCACCGGGCGTC . PASS AC=2;AF=6.667e-03;AN=300;ANN=AGTCTGATTGCCCGGTTCCTCCTCGCGCCGCAAACGGCGCGCATCGTCACCGGGCGTC|intergenic_region|MODIFIER|Rv1729c_Rv1729c-Rv1730c_Rv1730c|gene1770-gene1771|intergenic_region|gene1770-gene1771|||n.1955581_1955582insGTCTGATTGCCCGGTTCCTCCTCGCGCCGCAAACGGCGCGCATCGTCACCGGGCGTC||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:36 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:20 0/0:60:1:0:1:41:2.44%:66:5E-1:46:40:20:20:45 0/0:60:1:0:1:19:5.26%:28:5E-1:41:18:9:9:19 0/0:38:1:1:0:20:5%:27:5E-1:43:19:14:5:21 0/0:45:6:3:3:29:20.69%:16:1.1603E-2:45:22:12:10:29 0/0:34:1:0:1:15:6.67%:21:5E-1:53:14:7:7:16 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:17:0%:33:1E0:46:17:11:6:18 0/0:0:0:0:0:26:0%:47:1E0:45:26:20:6:27 0/0:39:2:1:1:31:6.45%:40:2.459E-1:49:29:20:9:32 0/0:37:1:0:1:39:2.56%:62:5E-1:42:38:27:11:39 0/0:0:0:0:0:13:0%:25:1E0:46:13:10:3:13 0/0:35:2:2:0:32:6.25%:40:2.4603E-1:44:30:21:9:34 0/0:0:0:0:0:28:0%:51:1E0:40:28:20:8:28 0/0:38:1:0:1:17:5.88%:24:5E-1:47:16:8:8:17 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:22 0/0:35:1:0:1:17:5.88%:24:5E-1:42:16:6:10:18 0/0:48:6:4:2:27:22.22%:16:1.1461E-2:48:21:12:9:28 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:22 0/0:37:1:0:1:21:4.76%:31:5E-1:42:20:11:9:23 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:37:1:1:0:24:4.17%:34:5E-1:47:23:15:8:25 0/0:33:1:0:1:24:4.17%:34:5E-1:46:23:14:9:24 0/0:29:3:3:0:31:9.38%:34:1.1905E-1:42:29:12:17:32 0/0:36:2:1:1:20:10%:21:2.4359E-1:46:18:6:12:20 0/0:0:0:0:0:15:0%:29:1E0:37:15:12:3:16 0/0:39:1:1:0:14:7.14%:17:5E-1:44:13:8:5:14 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:60:2:0:2:22:9.09%:24:2.4419E-1:50:20:10:10:24 0/0:44:2:1:1:27:7.41%:34:2.4528E-1:43:25:18:7:27 0/0:37:1:0:1:15:6.67%:21:5E-1:41:14:7:7:16 0/0:0:0:0:0:12:0%:21:1E0:49:12:8:4:12 0/0:37:1:1:0:23:4.35%:34:5E-1:43:22:10:12:23 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:29 0/0:38:2:0:2:23:8.7%:28:2.4444E-1:42:21:13:8:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:37:1:0:1:23:4.35%:34:5E-1:44:22:9:13:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:60:1:0:1:30:3.33%:41:5E-1:42:27:16:11:30 0/0:38:1:1:0:44:2.27%:69:5E-1:44:43:22:21:46 0/0:34:1:0:1:13:7.69%:18:5E-1:42:12:9:3:14 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:22 0/0:41:6:5:1:32:18.75%:20:1.2087E-2:44:26:16:10:32 0/0:39:1:0:1:32:3.12%:48:5E-1:43:31:16:15:33 0/0:37:1:0:1:19:5.26%:28:5E-1:46:18:8:10:22 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:26 0/0:37:1:1:0:28:3.57%:38:5E-1:41:25:16:9:29 0/0:32:1:1:0:30:3.33%:44:5E-1:47:29:17:12:33 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:38:5:3:2:32:15.62%:24:2.6412E-2:45:27:17:10:33 0/0:0:0:0:0:15:0%:29:1E0:46:15:5:10:15 0/0:35:2:0:2:28:7.14%:34:2.4545E-1:44:26:12:14:31 0/0:38:1:0:1:20:5%:27:5E-1:42:19:13:6:21 0/0:37:2:1:1:41:4.88%:57:2.4691E-1:45:39:24:15:41 0/0:37:1:1:0:31:3.23%:48:5E-1:40:30:17:13:32 0/0:35:2:1:1:18:11.11%:18:2.4242E-1:44:15:8:7:19 0/0:39:1:1:0:54:1.85%:87:5E-1:43:53:33:20:57 0/0:37:1:1:0:25:4%:38:5E-1:45:24:16:8:25 0/0:37:2:2:0:21:9.52%:25:2.439E-1:46:19:11:8:21 0/0:60:1:1:0:27:3.7%:38:5E-1:44:25:14:11:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:34 0/0:39:1:1:0:21:4.76%:31:5E-1:44:20:12:8:21 0/1:43:8:5:3:30:26.67%:26:2.2392E-3:43:21:12:9:31 0/0:42:5:3:2:45:11.11%:41:2.7721E-2:46:39:23:16:46 0/0:45:5:1:4:28:17.86%:19:2.5527E-2:41:22:13:9:29 0/0:36:2:1:1:38:5.26%:50:2.4658E-1:44:35:17:18:38 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:19 0/0:0:0:0:0:17:0%:33:1E0:45:17:12:5:17 0/0:33:1:1:0:33:3.03%:52:5E-1:47:32:24:8:35 0/0:48:2:2:0:23:8.7%:24:2.4419E-1:48:20:10:10:24 0/0:39:1:1:0:13:7.69%:18:5E-1:48:12:8:4:13 0/0:43:5:1:4:28:17.86%:19:2.5729E-2:50:23:10:13:29 0/0:45:3:2:1:32:9.38%:34:1.1905E-1:40:29:13:16:35 0/0:33:1:0:1:18:5.56%:24:5E-1:42:17:9:8:18 0/0:30:2:1:1:22:9.09%:24:2.4419E-1:45:20:12:8:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 0/0:38:1:1:0:19:5.26%:28:5E-1:39:18:12:6:21 0/0:48:2:1:1:23:8.7%:28:2.4444E-1:39:21:13:8:24 0/0:38:1:1:0:11:9.09%:14:5E-1:44:10:4:6:11 0/0:45:3:2:1:40:7.5%:46:1.2025E-1:45:37:22:15:41 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:28 0/0:37:1:1:0:22:4.55%:31:5E-1:48:21:12:9:22 0/0:51:5:3:2:24:20.83%:14:2.4548E-2:41:18:11:7:26 0/0:29:2:1:1:25:8%:31:2.449E-1:42:23:14:9:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:27 0/0:38:1:1:0:21:4.76%:31:5E-1:44:20:10:10:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:24:9:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:49:5:1:4:29:17.24%:19:2.5729E-2:47:23:15:8:29 0/0:0:0:0:0:23:0%:44:1E0:52:23:13:10:26 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:37 0/0:37:1:0:1:27:3.7%:41:5E-1:42:26:17:9:28 0/0:38:3:2:1:37:8.11%:43:1.1986E-1:43:34:17:17:38 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:24 0/0:37:1:1:0:22:4.55%:31:5E-1:42:21:8:13:23 0/0:34:1:1:0:18:5.56%:24:5E-1:44:17:8:9:18 0/0:39:1:0:1:18:5.56%:24:5E-1:46:17:9:8:19 0/0:37:1:1:0:31:3.23%:44:5E-1:42:29:17:12:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:19 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:44:30:13:17:33 0/0:45:3:2:1:27:11.11%:28:1.1792E-1:40:24:17:7:28 0/0:38:1:0:1:19:5.26%:28:5E-1:42:18:11:7:21 0/0:37:1:1:0:13:7.69%:18:5E-1:41:12:4:8:13 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:22 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:20 0/0:34:3:0:3:24:12.5%:22:1.1702E-1:43:21:10:11:25 0/0:34:1:1:0:24:4.17%:34:5E-1:46:23:10:13:24 0/0:39:2:1:1:32:6.25%:40:2.4603E-1:44:30:20:10:32 0/0:37:1:1:0:25:4%:38:5E-1:43:24:14:10:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:29 0/0:30:3:2:1:20:15%:16:1.1538E-1:39:17:9:8:21 0/0:36:2:2:0:29:6.9%:34:2.4545E-1:41:26:13:13:30 0/0:33:1:0:1:34:2.94%:51:5E-1:39:33:23:10:34 0/0:37:4:2:2:22:18.18%:15:5.3471E-2:38:17:13:4:25 0/0:60:1:1:0:19:5.26%:28:5E-1:38:18:10:8:22 0/0:48:2:1:1:30:6.67%:37:2.4561E-1:44:27:13:14:31 0/0:45:2:2:0:22:9.09%:25:2.439E-1:46:19:8:11:23 0/0:37:5:5:0:57:8.77%:62:2.8522E-2:42:52:26:26:57 0/0:52:6:1:5:49:12.24%:44:1.3285E-2:42:43:23:20:50 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:21 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:18 0/0:60:1:0:1:39:2.56%:62:5E-1:39:38:25:13:44 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:34 0/0:32:2:2:0:38:5.26%:50:2.4658E-1:39:35:23:12:41 0/0:0:0:0:0:22:0%:40:1E0:36:22:14:8:23 0/0:39:1:0:1:31:3.23%:48:5E-1:37:30:13:17:32 0/0:30:4:3:1:27:14.29%:23:5.5746E-2:39:24:12:12:28 0/0:38:2:1:1:26:7.69%:30:2.451E-1:38:24:16:8:28 0/0:37:1:0:1:31:3.23%:48:5E-1:41:30:13:17:32 0/0:49:2:1:1:30:6.67%:37:2.4576E-1:39:28:14:14:30 0/0:37:1:1:0:26:3.85%:38:5E-1:37:25:9:16:28 0/0:42:5:0:5:28:17.24%:22:2.5917E-2:39:24:12:12:31 0/0:48:2:0:2:25:8%:31:2.449E-1:37:23:8:15:25 0/0:38:2:2:0:28:7.14%:34:2.4528E-1:39:25:14:11:30 0/0:36:2:0:2:43:4.65%:57:2.4691E-1:39:39:20:19:44 0/0:37:2:1:1:37:5.41%:47:2.4648E-1:42:34:16:18:41 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:26 0/1:49:7:4:3:37:18.92%:22:5.721E-3:41:30:14:16:37 0/0:42:5:3:2:38:13.16%:32:2.7169E-2:42:33:14:19:38 0/0:39:2:1:1:19:10.53%:21:2.4324E-1:41:17:10:7:20 0/0:39:1:0:1:26:3.85%:38:5E-1:44:25:9:16:26 0/0:35:2:1:1:29:6.9%:37:2.4561E-1:41:27:12:15:29 0/0:37:1:1:0:23:4.35%:34:5E-1:42:22:15:7:24 0/0:37:2:1:1:19:10.53%:21:2.4324E-1:42:17:8:9:19 0/0:38:2:1:1:28:7.14%:34:2.4528E-1:40:25:12:13:29 0/0:43:4:3:1:33:12.12%:29:5.6596E-2:41:28:20:8:33 0/0:0:0:0:0:48:0%:89:1E0:42:48:30:18:51 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:32 MTB_anc 1956523 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv1730c_Rv1730c|gene1771|transcript|Transcript_gene1771|Coding|1/1|c.723T>G|p.Thr241Thr|723/1554|723/1554|241/517||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1956523A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1956523A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:56:32:24:57:98.25%:99:3.7452E-32:33:1:1:0:57 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:61:34:27:62:98.39%:99:2.609E-36:0:0:0:0:62 1/1:46:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:53:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:50:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:62:26:36:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:37:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:40:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:61:30:31:61:100%:99:2.609E-36:0:0:0:0:64 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 1960204 . AC A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|frameshift_variant|HIGH|Rv1733c_Rv1733c|gene1774|transcript|Transcript_gene1774|Coding|1/1|c.283delG|p.Val95fs|283/633|283/633|95/210||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1960205delC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1960205delC||||||;HOM=0;LOF=(Rv1733c_Rv1733c|gene1774|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:37:37:20:17:43 0/0:0:0:0:0:11:0%:22:1E0:43:11:8:3:11 0/0:0:0:0:0:47:0%:89:1E0:38:47:16:31:49 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:30 0/0:31:1:0:1:31:3.23%:48:5E-1:38:30:16:14:32 0/0:0:0:0:0:20:0%:36:1E0:36:20:5:15:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:33 0/0:0:0:0:0:18:0%:32:1E0:40:18:13:5:18 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:20:6:28 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:24 0/0:0:0:0:0:52:0%:96:1E0:37:52:25:27:54 0/0:0:0:0:0:13:0%:25:1E0:43:13:6:7:14 0/0:0:0:0:0:34:0%:62:1E0:37:34:18:16:37 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:30 0/0:0:0:0:0:23:0%:44:1E0:36:23:13:10:25 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:20 0/0:0:0:0:0:14:0%:25:1E0:41:14:6:8:14 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:19:0%:37:1E0:34:19:10:9:21 0/0:0:0:0:0:42:0%:77:1E0:38:42:23:19:46 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:25:0%:48:1E0:35:25:14:11:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:38 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:35 0/0:0:0:0:0:25:0%:48:1E0:36:25:12:13:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:49:0%:93:1E0:38:49:21:28:53 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:29 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:40 0/0:0:0:0:0:34:0%:62:1E0:37:34:16:18:35 0/0:0:0:0:0:43:0%:82:1E0:38:43:26:17:43 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:34:31:10:21:32 0/0:0:0:0:0:38:0%:70:1E0:35:38:16:22:39 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:32 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:31 0/0:0:0:0:0:37:0%:70:1E0:37:37:19:18:40 0/0:0:0:0:0:40:0%:74:1E0:37:40:24:16:45 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:21 0/0:0:0:0:0:25:0%:48:1E0:34:25:9:16:26 0/0:0:0:0:0:12:0%:21:1E0:36:12:8:4:12 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:35 0/0:0:0:0:0:27:0%:52:1E0:34:27:11:16:29 0/0:0:0:0:0:42:0%:77:1E0:38:42:21:21:46 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:28 0/0:32:1:0:1:25:4%:38:5E-1:39:24:13:11:27 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:49 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:29 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:21 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:27 0/0:34:1:1:0:33:3.03%:52:5E-1:37:32:17:15:34 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:22 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:30 0/0:35:1:1:0:62:1.61%:99:5E-1:40:61:30:31:66 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:25 0/0:0:0:0:0:25:0%:48:1E0:36:25:13:12:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:25 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:37 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:31 0/0:0:0:0:0:38:0%:70:1E0:38:38:20:18:41 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:31 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:34 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:26 0/0:0:0:0:0:30:0%:55:1E0:36:30:16:14:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:25 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:28 0/0:0:0:0:0:46:0%:85:1E0:39:46:20:26:46 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:28 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:21 0/0:0:0:0:0:28:0%:51:1E0:35:28:11:17:32 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:29 0/0:0:0:0:0:16:0%:29:1E0:34:16:13:3:17 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:41:0%:78:1E0:38:41:28:13:43 0/0:0:0:0:0:19:0%:37:1E0:41:19:13:6:20 0/1:37:22:9:13:44:47.83%:80:8.5409E-9:35:24:13:11:47 0/0:60:1:1:0:34:2.94%:51:5E-1:37:33:16:17:34 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:41 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:21 0/0:0:0:0:0:18:0%:32:1E0:40:18:6:12:19 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:35 0/0:0:0:0:0:23:0%:44:1E0:33:23:14:9:27 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:27 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:45:0%:85:1E0:40:45:19:26:46 0/0:0:0:0:0:25:0%:48:1E0:34:25:16:9:26 0/0:0:0:0:0:19:0%:37:1E0:34:19:9:10:20 0/0:0:0:0:0:17:0%:33:1E0:34:17:10:7:20 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:25 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:20 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:22 0/0:0:0:0:0:36:0%:66:1E0:38:36:15:21:41 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:28 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:20 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:25 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:27 0/0:0:0:0:0:25:0%:48:1E0:34:25:9:16:27 0/0:0:0:0:0:29:0%:55:1E0:34:29:11:18:32 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:38 0/0:0:0:0:0:18:0%:32:1E0:35:18:9:9:20 0/0:0:0:0:0:55:0%:99:1E0:39:55:33:22:57 0/0:0:0:0:0:41:0%:78:1E0:38:41:23:18:45 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:24 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:21 0/0:0:0:0:0:30:0%:55:1E0:36:30:13:17:31 0/0:0:0:0:0:40:0%:74:1E0:35:40:18:22:43 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:34 0/0:0:0:0:0:26:0%:47:1E0:35:26:14:12:30 0/0:0:0:0:0:39:0%:74:1E0:34:39:20:19:41 0/0:0:0:0:0:20:0%:36:1E0:34:20:5:15:29 0/0:0:0:0:0:23:0%:44:1E0:34:23:6:17:25 0/0:0:0:0:0:21:0%:40:1E0:34:21:13:8:25 0/0:0:0:0:0:34:0%:62:1E0:36:34:18:16:35 0/0:0:0:0:0:35:0%:67:1E0:36:35:15:20:36 0/0:0:0:0:0:33:0%:63:1E0:34:33:18:15:39 0/0:0:0:0:0:22:0%:40:1E0:34:22:12:10:25 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:32 0/0:0:0:0:0:45:0%:85:1E0:35:45:16:29:45 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:30 0/0:0:0:0:0:20:0%:36:1E0:38:20:14:6:23 0/0:0:0:0:0:42:0%:77:1E0:37:42:20:22:43 0/0:0:0:0:0:37:0%:70:1E0:37:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:36:32:13:19:32 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:31 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:24 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:22 0/0:0:0:0:0:30:0%:55:1E0:36:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:36:34:20:14:36 0/0:0:0:0:0:53:0%:99:1E0:37:53:21:32:57 0/0:0:0:0:0:15:0%:29:1E0:34:15:7:8:16 MTB_anc 1960364 . C A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|stop_gained|HIGH|Rv1733c_Rv1733c|gene1774|transcript|Transcript_gene1774|Coding|1/1|c.124G>T|p.Glu42*|124/633|124/633|42/210||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1960364C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1960364C>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:41:47:17:30:48 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:24 0/0:0:0:0:0:63:0%:99:1E0:44:63:21:42:65 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:25 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:8:21:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:22 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:37 0/0:0:0:0:0:39:0%:74:1E0:40:39:14:25:39 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:7:24:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:24 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:22 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:10:22:32 0/0:37:1:0:1:43:2.33%:70:5E-1:42:42:17:25:44 0/1:42:8:2:6:27:29.63%:26:2.1337E-3:45:19:9:10:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:9:22:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:19:0%:37:1E0:45:19:5:14:19 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:32 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:42 0/0:39:1:0:1:32:3.12%:48:5E-1:42:31:14:17:32 0/0:37:1:1:0:40:2.5%:62:5E-1:47:39:13:26:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:11:26:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:0:0:0:0:32:0%:59:1E0:38:32:10:22:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:45 0/0:0:0:0:0:15:0%:29:1E0:45:15:6:9:15 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:10:25:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:39 0/0:38:1:0:1:38:2.63%:58:5E-1:41:37:14:23:39 0/0:0:0:0:0:49:0%:93:1E0:41:49:13:36:51 0/0:0:0:0:0:42:0%:77:1E0:44:42:12:30:43 0/0:0:0:0:0:15:0%:29:1E0:42:15:3:12:15 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:60:1:1:0:18:5.56%:24:5E-1:42:17:4:13:18 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:35 0/0:0:0:0:0:23:0%:44:1E0:39:23:5:18:23 0/0:0:0:0:0:46:0%:85:1E0:41:46:18:28:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:47:0%:89:1E0:40:47:14:33:48 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:40 0/0:0:0:0:0:22:0%:40:1E0:42:22:6:16:22 0/0:60:1:1:0:35:2.86%:55:5E-1:45:34:13:21:35 0/0:37:1:0:1:59:1.69%:98:5E-1:42:58:22:36:59 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:37:1:0:1:43:2.33%:70:5E-1:42:42:21:21:43 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:23 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:37:1:0:1:37:2.7%:59:5E-1:39:36:10:26:37 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:36 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:22 0/0:0:0:0:0:34:0%:62:1E0:41:34:8:26:34 0/0:0:0:0:0:48:0%:89:1E0:42:48:19:29:48 0/0:0:0:0:0:42:0%:77:1E0:40:42:12:30:42 0/0:0:0:0:0:32:0%:59:1E0:46:32:10:22:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:8:23:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:8:31:39 0/0:0:0:0:0:17:0%:33:1E0:45:17:11:6:17 0/0:32:1:1:0:36:2.78%:55:5E-1:44:35:16:19:36 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:28 0/0:0:0:0:0:61:0%:99:1E0:40:61:20:41:61 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:44 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:5:27:34 0/0:39:1:0:1:47:2.13%:77:5E-1:42:46:13:33:47 0/0:0:0:0:0:37:0%:70:1E0:39:37:12:25:38 0/0:0:0:0:0:40:0%:74:1E0:38:40:15:25:41 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:37:0%:70:1E0:42:37:11:26:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:7:20:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:24:0%:44:1E0:39:24:9:15:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:29 0/0:0:0:0:0:28:0%:51:1E0:39:28:5:23:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:4:23:29 0/0:0:0:0:0:35:0%:67:1E0:37:35:14:21:37 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:33 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:60:0%:99:1E0:40:60:27:33:62 0/0:0:0:0:0:54:0%:99:1E0:41:54:21:33:55 0/0:0:0:0:0:33:0%:63:1E0:42:33:9:24:35 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:23 0/0:0:0:0:0:46:0%:85:1E0:38:46:18:28:47 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:34 0/0:0:0:0:0:44:0%:81:1E0:39:44:19:25:45 0/0:0:0:0:0:31:0%:59:1E0:38:31:8:23:33 0/0:0:0:0:0:39:0%:74:1E0:40:39:15:24:43 0/0:0:0:0:0:49:0%:93:1E0:38:49:17:32:51 0/0:0:0:0:0:30:0%:55:1E0:39:30:7:23:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:29 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:46 0/0:0:0:0:0:42:0%:77:1E0:39:42:10:32:45 0/0:0:0:0:0:42:0%:77:1E0:38:42:16:26:42 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:55:0%:99:1E0:37:55:21:34:56 0/0:37:1:0:1:53:1.89%:88:5E-1:42:52:21:31:53 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:37 0/0:0:0:0:0:37:0%:70:1E0:39:37:12:25:37 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:0:0:0:0:35:0%:67:1E0:42:35:9:26:35 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:22 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:20 0/0:0:0:0:0:19:0%:37:1E0:38:19:5:14:19 0/0:0:0:0:0:28:0%:51:1E0:39:28:8:20:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:49:0%:93:1E0:41:49:11:38:49 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 MTB_anc 1960373 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv1733c_Rv1733c|gene1774|transcript|Transcript_gene1774|Coding|1/1|c.115G>A|p.Asp39Asn|115/633|115/633|39/210||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1960373C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1960373C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:42:47:16:31:47 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:24 0/0:0:0:0:0:62:0%:99:1E0:44:62:21:41:62 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:9:23:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:6:16:23 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:29 0/0:0:0:0:0:35:0%:67:1E0:47:35:12:23:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:16:25:41 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:25 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:47 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:7:24:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:9:22:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:9:22:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:21 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:37:1:0:1:44:2.27%:69:5E-1:46:43:16:27:44 0/1:44:15:5:10:39:38.46%:52:5.7558E-6:44:24:8:16:39 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:48 0/0:0:0:0:0:32:0%:59:1E0:39:32:8:24:32 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:17 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:9:25:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:38:1:0:1:39:2.56%:62:5E-1:47:38:17:21:39 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:44 0/0:0:0:0:0:50:0%:92:1E0:40:50:13:37:51 0/0:0:0:0:0:43:0%:82:1E0:44:43:12:31:44 0/0:0:0:0:0:16:0%:29:1E0:44:16:4:12:16 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:0:0:0:0:18:0%:32:1E0:43:18:5:13:18 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:39:1:0:1:24:4.17%:34:5E-1:38:23:5:18:24 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:44 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:46:0%:85:1E0:40:46:13:33:47 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:42 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:24 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:38 0/0:38:1:0:1:57:1.75%:95:5E-1:42:56:21:35:57 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:38:1:0:1:21:4.76%:31:5E-1:48:20:9:11:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:37:0%:70:1E0:39:37:12:25:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:33:0%:63:1E0:41:33:10:23:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:47 0/0:0:0:0:0:42:0%:77:1E0:40:42:12:30:42 0/0:0:0:0:0:31:0%:59:1E0:46:31:10:21:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:8:25:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:9:30:40 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:17 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:27:0%:52:1E0:47:27:9:18:27 0/0:0:0:0:0:61:0%:99:1E0:40:61:21:40:62 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:4:28:33 0/0:0:0:0:0:48:0%:89:1E0:42:48:14:34:48 0/0:0:0:0:0:39:0%:74:1E0:39:39:12:27:39 0/0:0:0:0:0:41:0%:78:1E0:39:41:15:26:41 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:42:39:12:27:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:7:19:28 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:43 0/0:0:0:0:0:25:0%:48:1E0:40:25:9:16:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:6:25:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:4:24:29 0/0:0:0:0:0:37:0%:70:1E0:37:37:14:23:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:63:0%:99:1E0:40:63:28:35:63 0/0:0:0:0:0:55:0%:99:1E0:41:55:23:32:57 0/0:0:0:0:0:35:0%:67:1E0:42:35:10:25:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 0/0:0:0:0:0:47:0%:89:1E0:38:47:20:27:48 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:33 0/0:0:0:0:0:48:0%:89:1E0:39:48:20:28:48 0/0:0:0:0:0:34:0%:62:1E0:37:34:8:26:35 0/0:0:0:0:0:44:0%:81:1E0:40:44:16:28:44 0/0:0:0:0:0:50:0%:92:1E0:38:50:18:32:50 0/0:0:0:0:0:29:0%:55:1E0:41:29:6:23:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:30 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:45 0/0:0:0:0:0:40:0%:74:1E0:40:40:12:28:42 0/0:0:0:0:0:42:0%:77:1E0:38:42:17:25:43 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:59:0%:99:1E0:36:59:22:37:59 0/0:0:0:0:0:53:0%:99:1E0:44:53:21:32:53 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:38:0%:70:1E0:40:38:13:25:39 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:10:27:37 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:40:29:9:20:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:23 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:19 0/0:0:0:0:0:28:0%:51:1E0:40:28:8:20:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:49:0%:93:1E0:41:49:12:37:49 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 MTB_anc 1960483 . A T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv1733c_Rv1733c|gene1774|transcript|Transcript_gene1774|Coding|1/1|c.5T>A|p.Ile2Asn|5/633|5/633|2/210||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1960483A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1960483A>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:42 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:24 0/0:0:0:0:0:55:0%:99:1E0:44:55:23:32:56 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:29 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:24 0/0:0:0:0:0:38:0%:70:1E0:50:38:19:19:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:26 0/0:0:0:0:0:24:0%:44:1E0:54:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:50:36:14:22:36 0/0:0:0:0:0:43:0%:82:1E0:52:43:17:26:45 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:45 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:32 0/0:0:0:0:0:52:0%:96:1E0:46:52:24:28:55 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:8:21:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:32 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:51:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:27 0/0:0:0:0:0:43:0%:82:1E0:41:43:14:29:43 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:6:15:23 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:60:0%:99:1E0:45:60:23:37:60 0/0:0:0:0:0:35:0%:67:1E0:45:35:10:25:36 0/0:0:0:0:0:48:0%:89:1E0:46:48:28:20:48 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:37 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:21 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:7:21:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:53 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:20:0%:36:1E0:53:20:10:10:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:43 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:24 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:42:0%:77:1E0:47:42:25:17:42 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:38 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:51 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:13:28:41 0/0:0:0:0:0:49:0%:93:1E0:46:49:21:28:51 0/0:0:0:0:0:24:0%:44:1E0:50:24:9:15:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:24:0%:44:1E0:49:24:8:16:24 0/0:0:0:0:0:25:0%:48:1E0:50:25:11:14:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:22:0%:40:1E0:50:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:46 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:38:0%:70:1E0:48:38:12:26:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:42 0/0:0:0:0:0:32:0%:59:1E0:45:32:8:24:33 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:25 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:16 0/0:0:0:0:0:43:0%:82:1E0:46:43:20:23:43 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:48:2:0:2:62:3.23%:91:2.4797E-1:43:60:24:36:64 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:43 0/1:43:7:2:5:21:33.33%:23:4.3101E-3:47:14:7:7:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:5:23:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:12:26:38 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:32 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:11:21:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:29:0%:55:1E0:49:29:8:21:29 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:43 0/0:0:0:0:0:28:0%:51:1E0:50:28:7:21:28 0/0:0:0:0:0:50:0%:92:1E0:43:50:21:29:50 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:7:19:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:39 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:73:0%:99:1E0:45:73:36:37:73 0/0:0:0:0:0:61:0%:99:1E0:43:61:20:41:63 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:37 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:60:0%:99:1E0:40:60:31:29:61 0/0:0:0:0:0:59:0%:99:1E0:45:59:27:32:60 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:42 0/0:0:0:0:0:49:0%:93:1E0:45:49:20:29:49 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:31 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:32 0/0:0:0:0:0:47:0%:89:1E0:40:47:26:21:49 0/0:0:0:0:0:65:0%:99:1E0:44:65:20:45:65 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 MTB_anc 1963776 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|narX_Rv1736c|gene1779|transcript|Transcript_gene1779|Coding|1/1|c.411A>G|p.Ala137Ala|411/1959|411/1959|137/652||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1963776T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1963776T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:31:0%:59:1E0:42:31:22:9:31 0/0:0:0:0:0:16:0%:29:1E0:49:16:10:6:16 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:41 0/0:0:0:0:0:17:0%:33:1E0:45:17:5:12:17 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:18:9:27 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:17:0%:33:1E0:46:17:12:5:17 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:33 0/0:0:0:0:0:13:0%:25:1E0:42:13:4:9:13 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:41 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:15 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:17:0%:33:1E0:48:17:10:7:17 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:47 0/0:0:0:0:0:20:0%:36:1E0:46:20:15:5:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:40 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:22 0/0:0:0:0:0:18:0%:32:1E0:42:18:4:14:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:35 0/0:0:0:0:0:62:0%:99:1E0:45:62:32:30:65 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:38 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:39 0/0:0:0:0:0:39:0%:74:1E0:38:39:18:21:40 0/0:0:0:0:0:39:0%:74:1E0:47:39:24:15:39 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:18 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:46 0/0:0:0:0:0:22:0%:40:1E0:40:22:16:6:22 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:57:0%:99:1E0:42:57:29:28:61 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:38 0/0:0:0:0:0:16:0%:29:1E0:42:16:6:10:16 0/0:0:0:0:0:41:0%:78:1E0:42:41:14:27:42 0/0:0:0:0:0:31:0%:59:1E0:49:31:20:11:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:34 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:40 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:48 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:33 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:46 0/0:0:0:0:0:46:0%:85:1E0:44:46:18:28:47 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:45 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:11:0%:22:1E0:47:11:6:5:12 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:50:30:17:13:31 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:16 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:48 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:43 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:34 0/0:0:0:0:0:50:0%:92:1E0:43:50:24:26:51 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:44 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:25 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:42 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:36 0/0:0:0:0:0:16:0%:29:1E0:42:16:5:11:16 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:24:0%:44:1E0:51:24:15:9:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:19 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:48 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:49 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:21 0/0:0:0:0:0:31:0%:59:1E0:41:31:8:23:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:37 0/0:0:0:0:0:17:0%:33:1E0:42:17:6:11:17 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:30 0/0:0:0:0:0:41:0%:78:1E0:47:41:23:18:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:25:0%:48:1E0:36:25:12:13:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:43:0%:82:1E0:39:43:18:25:44 0/0:0:0:0:0:30:0%:55:1E0:37:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:19 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:42 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:34 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:42 0/0:0:0:0:0:40:0%:74:1E0:38:40:16:24:44 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:33 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:21 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:0:0:0:0:42:0%:77:1E0:37:42:21:21:44 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:40 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:11:29:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:11:22:33 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:35 0/0:0:0:0:0:28:0%:51:1E0:39:28:7:21:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:54:0%:99:1E0:41:54:27:27:55 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:39 MTB_anc 1963957 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|narX_Rv1736c|gene1779|transcript|Transcript_gene1779|Coding|1/1|c.230G>A|p.Gly77Asp|230/1959|230/1959|77/652||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1963957C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1963957C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:53:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:22:9:13:23:95.65%:99:2.9149E-12:36:1:0:1:23 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:24:9:15:25:96%:99:3.101E-14:0:0:0:0:27 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:18:8:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:24:10:14:25:96%:99:2.0568E-13:38:1:1:0:25 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:36:20:16:37:97.3%:99:2.1762E-20:60:1:1:0:37 1/1:47:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:29:19:10:30:96.67%:99:2.6212E-16:34:1:1:0:30 1/1:38:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:13:15:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:18:20:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 MTB_anc 1964985 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|narK2_Rv1737c|gene1780|transcript|Transcript_gene1780|Coding|1/1|c.386G>A|p.Arg129Gln|386/1188|386/1188|129/395||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1964985C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1964985C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:44:25:19:45:97.78%:99:4.4304E-25:39:1:0:1:46 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:39:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:37:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:39:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:36:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 MTB_anc 1966558 . A G . PASS AC=68;AF=0.227;AN=300;ANN=G|synonymous_variant|LOW|Rv1739c_Rv1739c|gene1782|transcript|Transcript_gene1782|Coding|1/1|c.1080T>C|p.Ala360Ala|1080/1683|1080/1683|360/560||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1966558A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1966558A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:47 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:0:0:0:0:50:0%:92:1E0:46:50:22:28:50 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:30 0/0:0:0:0:0:42:0%:77:1E0:49:42:27:15:43 0/0:0:0:0:0:32:0%:59:1E0:52:32:17:15:33 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:22:0%:40:1E0:53:22:17:5:22 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:42 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:28 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 1/1:45:16:8:8:17:94.12%:81:7.7134E-9:39:1:0:1:18 0/0:0:0:0:0:24:0%:44:1E0:53:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:23:7:31 0/0:0:0:0:0:58:0%:99:1E0:49:58:27:31:60 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:49 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 1/1:48:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 1/1:43:27:14:13:28:96.43%:99:3.7915E-15:60:1:0:1:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:33 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:60:0%:99:1E0:47:60:24:36:60 0/0:0:0:0:0:46:0%:85:1E0:47:46:27:19:48 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:16 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:37 0/0:0:0:0:0:43:0%:82:1E0:47:43:29:14:44 0/0:0:0:0:0:18:0%:32:1E0:52:18:14:4:18 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:29:12:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:24:9:33 0/0:0:0:0:0:42:0%:77:1E0:48:42:16:26:42 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:64:37:27:65:98.46%:99:6.9424E-37:39:1:1:0:65 1/1:50:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:18 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 1/1:51:21:13:8:22:95.45%:99:1.0931E-11:39:1:0:1:22 0/0:60:1:1:0:19:5.26%:28:5E-1:48:18:10:8:19 1/1:51:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:33:1:0:1:33:3.03%:52:5E-1:41:32:20:12:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:20 1/1:43:42:22:20:43:97.67%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:29 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 1/1:48:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:24:0%:44:1E0:52:24:12:12:24 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:44 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:44 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 1/1:45:23:13:10:24:95.83%:99:7.7525E-13:36:1:1:0:24 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:35 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:27:13:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:41 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:42 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:50 1/1:43:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:54 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:32 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 0/0:0:0:0:0:42:0%:77:1E0:39:42:27:15:42 0/0:0:0:0:0:59:0%:99:1E0:43:59:30:29:61 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:45 0/0:0:0:0:0:50:0%:92:1E0:41:50:20:30:52 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:47 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:44 1/1:38:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:48 1/1:37:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:59:0%:99:1E0:39:59:32:27:62 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:57:0%:99:1E0:42:57:32:25:61 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:38 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 1/1:40:26:12:14:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:54:0%:99:1E0:43:54:31:23:58 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 MTB_anc 1971725 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|idi_Rv1745c|gene1788|transcript|Transcript_gene1788|Coding|1/1|c.267G>C|p.Arg89Arg|267/612|267/612|89/203||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1971725C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1971725C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:25:11:14:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:31:12:19:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:23:9:14:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:36:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 1973649 . C T . PASS AC=124;AF=0.413;AN=300;ANN=T|missense_variant|MODERATE|Rv1747_Rv1747|gene1790|transcript|Transcript_gene1790|Coding|1/1|c.20C>T|p.Ala7Val|20/2598|20/2598|7/865||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1973649C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1973649C>T||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:53:0%:99:1E0:47:53:22:31:53 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:28 1/1:44:24:12:12:25:96%:99:2.0568E-13:37:1:0:1:25 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 1/1:51:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:23 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:33 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:39 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:38:1:1:0:25:4%:38:5E-1:46:24:14:10:25 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:17:0%:33:1E0:49:17:10:7:17 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:39:1:0:1:37:2.7%:59:5E-1:40:36:14:22:37 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:23 0/0:0:0:0:0:19:0%:37:1E0:52:19:10:9:19 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:32:0%:59:1E0:51:32:15:17:33 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 0/0:38:1:0:1:31:3.23%:48:5E-1:44:30:7:23:32 1/1:46:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:32 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:38 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:41 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:60:1:1:0:42:2.38%:66:5E-1:44:41:20:21:42 0/0:0:0:0:0:51:0%:97:1E0:46:51:24:27:53 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:51:0%:97:1E0:45:51:31:20:52 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:22 1/1:53:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:23:0%:44:1E0:49:23:20:3:25 0/0:0:0:0:0:50:0%:92:1E0:40:50:22:28:50 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 1/1:45:33:11:22:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:39:1:1:0:47:2.13%:77:5E-1:44:46:25:21:48 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:35:0%:67:1E0:48:35:13:22:36 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:39 1/1:49:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:36:21:15:37:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:33 0/0:60:1:1:0:28:3.57%:41:5E-1:42:27:13:14:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:36 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:45 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:8:17:26 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:6:19:25 0/0:0:0:0:0:27:0%:52:1E0:37:27:16:11:28 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:46 0/0:0:0:0:0:51:0%:97:1E0:38:51:27:24:52 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:9:21:30 0/0:0:0:0:0:63:0%:99:1E0:41:63:28:35:63 0/0:0:0:0:0:53:0%:99:1E0:43:53:28:25:54 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:47 0/0:0:0:0:0:43:0%:82:1E0:40:43:17:26:44 0/0:0:0:0:0:50:0%:92:1E0:40:50:22:28:50 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:46 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:43 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:44 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:46:0%:85:1E0:39:46:23:23:46 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 1/1:40:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 0/0:0:0:0:0:43:0%:82:1E0:39:43:13:30:43 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:27 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 MTB_anc 1980123 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|Rv1751_Rv1751|gene1794|transcript|Transcript_gene1794|Coding|1/1|c.503C>T|p.Pro168Leu|503/1383|503/1383|168/460||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1980123C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.1980123C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:40 0/0:0:0:0:0:18:0%:32:1E0:50:18:10:8:18 1/1:47:64:29:35:64:100%:99:4.1752E-38:0:0:0:0:64 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:33:0%:63:1E0:49:33:10:23:33 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:38:0%:70:1E0:49:38:15:23:38 0/0:0:0:0:0:35:0%:67:1E0:50:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:12:0%:21:1E0:49:12:6:6:12 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:48:28:8:20:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:28 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 0/0:0:0:0:0:29:0%:55:1E0:50:29:11:18:29 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:34 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:17:0%:33:1E0:40:17:4:13:17 0/0:0:0:0:0:26:0%:47:1E0:49:26:9:17:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:36:0%:66:1E0:49:36:14:22:36 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:37:0%:70:1E0:50:37:20:17:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:42 0/0:0:0:0:0:67:0%:99:1E0:47:67:42:25:69 0/0:0:0:0:0:51:0%:97:1E0:46:51:26:25:52 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:37:1:1:0:31:3.23%:48:5E-1:47:30:21:9:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:41 0/0:0:0:0:0:14:0%:25:1E0:54:14:6:8:14 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:39:1:1:0:38:2.63%:58:5E-1:46:37:19:18:39 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:36 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:20:8:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:45 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:44:0%:81:1E0:48:44:19:25:44 0/0:0:0:0:0:64:0%:99:1E0:45:64:39:25:64 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:60:1:0:1:35:2.86%:55:5E-1:49:34:17:17:35 0/0:0:0:0:0:20:0%:36:1E0:48:20:7:13:20 0/0:60:1:0:1:29:3.45%:45:5E-1:46:28:16:12:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:36:0%:66:1E0:49:36:20:16:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:33 0/0:60:1:0:1:40:2.5%:62:5E-1:47:39:18:21:41 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:30:0%:55:1E0:43:30:9:21:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:43 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:26:0%:47:1E0:50:26:11:15:26 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:35 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:30 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:12:21:33 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:34 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:21 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:44 0/0:37:1:1:0:25:4%:38:5E-1:43:24:10:14:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:37 0/0:0:0:0:0:46:0%:85:1E0:41:46:29:17:47 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:43 0/0:0:0:0:0:54:0%:99:1E0:41:54:24:30:55 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:23 0/0:0:0:0:0:53:0%:99:1E0:39:53:27:26:55 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:32 0/0:0:0:0:0:47:0%:89:1E0:43:47:28:19:47 0/0:0:0:0:0:50:0%:92:1E0:38:50:33:17:54 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:43 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:40 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:49 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:46 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:46 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:45 0/0:0:0:0:0:51:0%:97:1E0:40:51:25:26:51 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:48 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:46 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:42 0/0:0:0:0:0:48:0%:89:1E0:42:48:31:17:49 0/0:0:0:0:0:68:0%:99:1E0:43:68:38:30:69 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:41 MTB_anc 1982886 . TACGGTGATGTTGGCGGGTGTGGTGGCGGCCGGGATGTTCAACGACGGCAACGTCAACCCGGGCAGGCTGAAGGCGCCG T . PASS AC=48;AF=0.160;AN=300;ANN=T|disruptive_inframe_deletion|MODERATE|PPE24_Rv1753c|gene1796|transcript|Transcript_gene1796|Coding|1/1|c.1812_1889delCGGCGCCTTCAGCCTGCCCGGGTTGACGTTGCCGTCGTTGAACATCCCGGCCGCCACCACACCCGCCAACATCACCGT|p.Gly605_Val630del|1889/3162|1812/3162|604/1053||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1982887_1982964delACGGTGATGTTGGCGGGTGTGGTGGCGGCCGGGATGTTCAACGACGGCAACGTCAACCCGGGCAGGCTGAAGGCGCCG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1982887_1982964delACGGTGATGTTGGCGGGTGTGGTGGCGGCCGGGATGTTCAACGACGGCAACGTCAACCCGGGCAGGCTGAAGGCGCCG||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:1:0:26:3.85%:38:5E-1:43:25:10:15:27 1/1:51:13:7:6:14:92.86%:64:3.7391E-7:33:1:0:1:14 0/0:37:3:3:0:37:8.11%:43:1.1986E-1:41:34:18:16:38 0/0:38:1:1:0:14:7.14%:17:5E-1:43:13:11:2:14 0/0:38:1:1:0:19:5.26%:28:5E-1:45:18:12:6:20 0/0:49:2:2:0:26:7.69%:30:2.451E-1:39:24:11:13:26 0/0:49:2:2:0:35:5.71%:47:2.4638E-1:46:33:13:20:35 0/0:37:2:2:0:20:10%:21:2.4359E-1:43:18:9:9:20 0/0:0:0:0:0:17:0%:33:1E0:47:17:7:10:17 1/1:46:27:17:10:30:90%:99:4.6134E-14:42:3:3:0:30 1/1:47:19:11:8:21:90.48%:93:4.7003E-10:34:2:1:1:21 0/0:43:4:3:1:30:13.33%:26:5.62E-2:39:26:11:15:30 0/0:38:2:2:0:25:8%:31:2.449E-1:48:23:7:16:25 0/0:41:6:5:1:39:15.38%:31:1.2702E-2:44:33:19:14:39 0/1:41:17:11:6:20:85%:78:1.2848E-8:43:3:1:2:20 1/1:40:23:16:7:24:95.83%:99:7.7525E-13:38:1:1:0:25 0/0:49:2:2:0:25:8%:31:2.449E-1:45:23:17:6:26 0/0:38:2:2:0:21:9.52%:25:2.439E-1:46:19:10:9:21 0/1:45:12:6:6:16:75%:50:8.0605E-6:48:4:2:2:16 0/0:42:3:3:0:14:21.43%:9:1.1111E-1:46:11:6:5:14 0/1:45:20:12:8:24:83.33%:91:6.3493E-10:40:4:2:2:24 0/1:40:34:20:14:38:85%:99:8.7127E-17:48:6:0:6:40 0/0:43:4:4:0:32:12.5%:29:5.6596E-2:46:28:14:14:32 0/0:38:1:1:0:23:4.35%:34:5E-1:42:22:11:11:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:60:1:0:1:22:4.55%:31:5E-1:42:21:12:9:22 0/1:46:12:9:3:15:80%:52:5.2605E-6:42:3:3:0:15 0/0:38:3:2:1:27:11.11%:28:1.1792E-1:45:24:14:10:28 0/0:0:0:0:0:14:0%:25:1E0:44:14:10:4:14 0/0:37:1:1:0:26:3.85%:38:5E-1:41:25:14:11:27 0/0:60:1:1:0:24:4.17%:34:5E-1:41:23:15:8:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:48:2:1:1:24:8.33%:27:2.4468E-1:46:22:10:12:25 0/1:42:15:9:6:17:83.33%:68:1.4655E-7:52:3:2:1:18 1/1:44:29:18:11:30:93.55%:99:1.1344E-15:36:2:1:1:31 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:41:34:19:15:36 1/1:42:28:15:13:31:90.32%:99:1.2857E-14:35:3:1:2:31 0/0:54:4:3:1:43:9.3%:47:5.8115E-2:45:39:17:22:43 0/0:45:5:2:3:45:11.11%:44:2.7799E-2:40:40:26:14:46 0/0:52:3:1:2:33:9.09%:37:1.1923E-1:43:30:17:13:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:34:4:2:2:33:11.76%:31:5.6946E-2:44:30:18:12:34 0/0:42:3:2:1:27:11.11%:28:1.1792E-1:38:24:13:11:27 0/1:40:21:17:4:25:84%:97:1.8789E-10:34:4:2:2:25 0/0:48:2:1:1:26:7.69%:30:2.451E-1:44:24:11:13:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:33 0/0:36:2:2:0:20:10%:21:2.4359E-1:41:18:7:11:20 0/0:38:1:1:0:26:3.85%:38:5E-1:43:25:10:15:26 0/0:35:2:2:0:28:7.14%:34:2.4545E-1:38:26:17:9:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:38:1:1:0:16:6.25%:21:5E-1:44:15:8:7:16 0/0:52:3:1:2:36:8.33%:40:1.1972E-1:37:33:23:10:37 0/0:38:1:1:0:16:6.25%:21:5E-1:48:15:7:8:16 0/0:38:1:1:0:27:3.7%:41:5E-1:43:26:16:10:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:9:21:31 0/0:37:3:3:0:25:12%:25:1.1735E-1:43:22:15:7:25 0/0:38:1:1:0:31:3.23%:48:5E-1:39:30:18:12:31 0/0:37:2:2:0:24:8.33%:27:2.4468E-1:39:22:15:7:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:45:3:2:1:41:7.32%:50:1.2037E-1:45:38:19:19:41 0/0:60:1:0:1:21:4.76%:27:5E-1:41:19:12:7:21 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:22 0/0:37:5:4:1:27:18.52%:19:2.5527E-2:42:22:8:14:28 1/1:45:19:11:8:20:95%:98:1.5234E-10:33:1:1:0:20 0/0:53:5:3:2:33:15.15%:27:2.6557E-2:47:28:12:16:33 0/0:44:6:4:2:57:10.53%:56:1.3607E-2:43:51:24:27:58 0/0:38:1:1:0:26:3.85%:38:5E-1:44:25:12:13:26 0/0:38:2:2:0:23:8.7%:28:2.4444E-1:38:21:12:9:24 0/0:38:2:2:0:15:13.33%:16:2.4138E-1:44:13:7:6:15 0/0:38:1:1:0:20:5%:27:5E-1:48:19:9:10:21 0/0:60:1:1:0:27:3.7%:41:5E-1:44:26:11:15:27 0/0:38:1:1:0:24:4.17%:34:5E-1:48:23:12:11:25 0/0:37:1:1:0:10:10%:11:5E-1:45:9:3:6:10 0/1:46:29:16:13:33:87.88%:99:9.1482E-15:40:4:2:2:33 0/1:37:18:11:7:22:81.82%:81:7.1052E-9:35:4:2:2:22 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:23 0/0:36:2:2:0:20:10%:21:2.4359E-1:39:18:11:7:21 0/0:42:5:4:1:33:15.15%:27:2.6557E-2:45:28:13:15:33 0/0:36:1:0:1:24:4.17%:34:5E-1:42:23:9:14:25 0/0:38:1:1:0:19:5.26%:28:5E-1:41:18:6:12:20 0/0:36:2:2:0:21:9.52%:25:2.439E-1:38:19:10:9:23 0/0:40:3:2:1:32:9.38%:34:1.1905E-1:41:29:14:15:33 0/0:60:2:1:1:38:5.26%:50:2.4667E-1:41:36:20:16:38 0/0:38:1:1:0:19:5.26%:28:5E-1:43:18:11:7:19 0/1:41:17:11:6:21:80.95%:76:2.3502E-8:35:4:2:2:21 0/0:38:1:1:0:23:4.35%:34:5E-1:44:22:10:12:24 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:38:1:1:0:23:4.35%:34:5E-1:42:22:9:13:23 0/0:38:1:1:0:30:3.33%:44:5E-1:43:29:18:11:30 0/0:49:2:1:1:16:12.5%:15:2.4194E-1:45:14:6:8:16 0/0:45:3:2:1:35:8.57%:40:1.1957E-1:42:32:17:15:35 0/1:44:14:8:6:16:87.5%:65:2.5454E-7:48:2:1:1:16 0/0:37:3:1:2:25:12%:25:1.1735E-1:39:22:11:11:25 0/1:37:21:11:10:26:80.77%:94:3.4262E-10:35:5:2:3:26 0/0:38:4:2:2:35:11.43%:35:5.7106E-2:42:31:14:17:35 0/0:37:1:1:0:17:5.88%:24:5E-1:39:16:10:6:17 0/0:60:2:0:2:24:8.33%:27:2.4468E-1:39:22:12:10:25 0/0:37:2:1:1:27:7.41%:34:2.4528E-1:42:25:13:12:28 0/1:41:22:12:10:26:84.62%:99:5.5261E-11:33:4:1:3:26 0/0:38:3:3:0:28:10.71%:28:1.1818E-1:41:25:15:10:29 0/0:35:1:1:0:22:4.55%:31:5E-1:43:21:11:10:22 0/0:38:2:2:0:32:6.25%:40:2.4603E-1:40:30:19:11:32 1/1:41:21:9:12:23:91.3%:99:3.6437E-11:35:2:0:2:23 0/0:37:2:1:1:26:7.69%:30:2.451E-1:37:24:9:15:26 0/0:0:0:0:0:13:0%:25:1E0:37:13:9:4:15 0/0:38:2:2:0:26:7.69%:30:2.451E-1:42:24:15:9:27 0/0:37:1:1:0:23:4.35%:34:5E-1:43:22:11:11:25 0/0:38:2:2:0:19:10.53%:21:2.4324E-1:41:17:9:8:19 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:37:5:4:1:25:20%:17:2.5076E-2:41:20:11:9:25 0/0:49:2:1:1:25:8%:31:2.449E-1:38:23:11:12:26 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:18 0/0:38:1:1:0:31:3.23%:48:5E-1:40:30:15:15:31 0/0:38:2:2:0:33:6.06%:44:2.4615E-1:38:31:15:16:33 0/0:38:2:1:1:39:5.13%:54:2.4675E-1:38:37:17:20:42 0/0:48:2:1:1:27:7.41%:34:2.4528E-1:37:25:11:14:28 0/0:49:2:1:1:35:5.71%:47:2.4638E-1:41:33:19:14:35 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:39:15:5:10:19 0/0:42:5:4:1:36:13.89%:29:2.6944E-2:41:31:16:15:37 0/1:41:34:15:19:42:80.95%:99:3.1978E-16:37:8:6:2:42 0/1:40:12:4:8:18:63.16%:47:1.8611E-5:35:7:4:3:19 1/1:43:18:12:6:20:90%:87:1.6758E-9:32:2:0:2:20 0/0:37:2:1:1:26:7.69%:30:2.451E-1:39:24:12:12:28 0/0:37:1:0:1:27:3.7%:41:5E-1:39:26:16:10:28 0/0:38:3:3:0:32:9.38%:34:1.1905E-1:38:29:17:12:32 0/1:37:21:6:15:24:84%:97:1.8789E-10:34:4:3:1:25 0/0:37:3:2:1:30:10%:31:1.1864E-1:37:27:11:16:30 0/1:37:27:13:14:31:87.1%:99:1.125E-13:37:4:2:2:31 0/0:37:3:2:1:31:9.68%:34:1.1885E-1:41:28:9:19:33 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 1/1:35:24:9:15:23:92.31%:99:7.6222E-13:36:2:1:1:27 0/1:38:18:11:7:23:78.26%:79:1.1937E-8:32:5:3:2:23 1/1:38:27:16:11:29:90%:99:4.6134E-14:34:3:2:1:30 1/1:37:23:14:9:24:92%:99:2.7767E-12:35:2:1:1:25 0/0:38:1:1:0:26:3.85%:38:5E-1:40:25:15:10:26 0/1:41:7:6:1:58:12.07%:21:6.4484E-3:38:51:18:33:59 0/0:37:2:2:0:29:6.9%:37:2.4561E-1:43:27:8:19:30 0/0:49:4:2:2:34:11.76%:31:5.6946E-2:40:30:14:16:35 0/0:38:3:3:0:33:9.09%:37:1.1923E-1:38:30:18:12:33 0/0:45:3:1:2:24:12.5%:22:1.1702E-1:41:21:11:10:24 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/1:39:21:12:9:23:87.5%:99:9.0704E-11:37:3:3:0:24 0/1:39:28:19:9:32:84.85%:99:6.9527E-14:34:5:4:1:33 0/1:37:27:13:14:30:87.1%:99:1.125E-13:35:4:2:2:31 0/0:60:1:0:1:20:5%:27:5E-1:40:19:7:12:20 0/0:37:3:2:1:25:12%:25:1.1735E-1:38:22:11:11:25 0/0:38:1:1:0:30:3.33%:44:5E-1:39:29:16:13:30 0/0:37:1:1:0:30:3.33%:44:5E-1:40:29:16:13:30 0/0:38:4:4:0:35:11.43%:35:5.7106E-2:41:31:10:21:35 MTB_anc 1982901 . G T . PASS AC=232;AF=1.00;AN=232;ANN=T|synonymous_variant|LOW|PPE24_Rv1753c|gene1796|transcript|Transcript_gene1796|Coding|1/1|c.1875C>A|p.Pro625Pro|1875/3162|1875/3162|625/1053||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1982901G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1982901G>T||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:24:10:14:25:100%:99:3.101E-14:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 1/1:42:31:15:16:34:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:13:11:2:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:13:9:4:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:21:8:13:23:100%:99:1.8578E-12:0:0:0:0:24 1/1:46:30:12:18:32:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:17:8:9:19:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 1/1:39:23:10:13:27:100%:99:1.2146E-13:0:0:0:0:27 1/1:50:19:4:15:21:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:32:18:14:38:100%:99:5.4567E-19:0:0:0:0:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:23 1/1:47:18:13:5:20:100%:99:1.1019E-10:0:0:0:0:21 1/1:49:14:8:6:16:100%:76:2.4927E-8:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 1/1:47:8:3:5:11:100%:41:7.77E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:36 1/1:46:27:13:14:31:100%:99:5.1363E-16:0:0:0:0:31 1/1:46:19:9:10:20:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:17:9:8:18:100%:93:4.2852E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 1/1:45:21:12:9:24:100%:99:1.8578E-12:0:0:0:0:25 1/1:45:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:24:13:11:25:100%:99:3.101E-14:0:0:0:0:25 1/1:41:22:14:8:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:19:9:10:21:100%:99:2.8292E-11:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:30 1/1:43:29:16:13:31:100%:99:3.3259E-17:0:0:0:0:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:28 1/1:47:36:16:20:40:100%:99:2.2598E-21:0:0:0:0:41 1/1:43:37:24:13:42:100%:99:5.7269E-22:0:0:0:0:45 1/1:45:25:15:10:28:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:18:12:34:100%:99:8.4556E-18:0:0:0:0:34 1/1:39:22:12:10:25:100%:99:4.7526E-13:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 1/1:45:22:9:13:24:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:16:6:10:18:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:24:10:14:25:100%:99:3.101E-14:0:0:0:0:25 1/1:38:27:17:10:29:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:28:12:16:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:15:8:7:16:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:32:23:9:35:100%:99:5.4567E-19:0:0:0:0:35 1/1:47:14:7:7:15:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:24:14:10:25:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:19:13:6:21:100%:99:2.8292E-11:0:0:0:0:23 1/1:41:27:18:9:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:18:11:7:20:100%:99:1.1019E-10:0:0:0:0:22 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:18:16:37:100%:99:3.5146E-20:0:0:0:0:38 1/1:43:19:11:8:20:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:19:6:13:24:100%:99:2.8292E-11:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 1/1:46:26:11:15:31:100%:99:2.0165E-15:0:0:0:0:31 1/1:43:47:21:26:53:100%:99:6.1512E-28:0:0:0:0:53 1/1:44:21:11:10:22:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:19:11:8:21:100%:99:2.8292E-11:0:0:0:0:22 1/1:47:9:4:5:11:100%:46:2.0568E-5:0:0:0:0:12 1/1:51:15:7:8:16:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:24:11:13:25:100%:99:3.101E-14:0:0:0:0:25 1/1:47:22:12:10:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:9:3:6:10:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:16:10:6:18:100%:87:1.6637E-9:0:0:0:0:18 1/1:44:26:11:15:31:100%:99:2.0165E-15:0:0:0:0:31 1/1:43:21:9:12:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:18:7:11:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:22:10:12:24:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:28:14:14:31:100%:99:1.3074E-16:0:0:0:0:32 1/1:43:30:15:15:32:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:18:11:7:19:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 1/1:44:20:9:11:21:100%:99:7.2544E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 1/1:42:20:8:12:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:26:16:10:27:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:12:5:7:14:100%:64:3.698E-7:0:0:0:0:14 1/1:43:26:14:12:29:100%:99:2.0165E-15:0:0:0:0:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 1/1:41:20:10:10:23:100%:99:7.2544E-12:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 1/1:42:28:13:15:32:100%:99:1.3074E-16:0:0:0:0:32 1/1:40:13:7:6:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:22:12:10:24:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:25:13:12:27:100%:99:7.9107E-15:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 1/1:42:24:13:11:27:100%:99:3.101E-14:0:0:0:0:28 1/1:42:19:9:10:20:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:29:19:10:31:100%:99:3.3259E-17:0:0:0:0:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 1/1:37:20:7:13:22:100%:99:7.2544E-12:0:0:0:0:23 1/1:39:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:19:12:7:21:100%:99:2.8292E-11:0:0:0:0:23 1/1:42:20:10:10:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:17:9:8:19:100%:93:4.2852E-10:0:0:0:0:20 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:20:11:9:25:100%:99:7.2544E-12:0:0:0:0:25 1/1:37:23:11:12:25:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:30:15:15:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:27:13:14:29:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:36:17:19:38:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:22:10:12:24:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:27:14:13:29:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:11:3:8:13:100%:58:1.4176E-6:0:0:0:0:14 1/1:42:31:17:14:36:100%:99:2.1486E-18:0:0:0:0:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 1/1:40:25:11:14:27:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:24:14:10:25:100%:99:3.101E-14:0:0:0:0:25 1/1:41:22:11:11:25:100%:99:4.7526E-13:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 1/1:37:22:8:14:25:100%:99:4.7526E-13:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:27 1/1:43:24:8:16:27:100%:99:3.101E-14:0:0:0:0:28 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 1/1:41:24:14:10:25:100%:99:3.101E-14:0:0:0:0:25 1/1:39:49:16:33:56:100%:99:3.925E-29:0:0:0:0:57 1/1:44:24:7:17:26:100%:99:3.101E-14:0:0:0:0:28 1/1:40:26:14:12:30:100%:99:2.0165E-15:0:0:0:0:30 1/1:39:27:18:9:30:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:18:10:8:21:100%:99:1.1019E-10:0:0:0:0:21 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:28 1/1:40:17:5:12:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:18:9:9:21:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:27:15:12:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:22:10:12:24:95.65%:99:2.9149E-12:38:1:1:0:25 1/1:41:28:10:18:32:100%:99:1.3074E-16:0:0:0:0:32 MTB_anc 1983120 . GACGGTGATGTTGGCTGGTGTGGTGGCGGCCGGGATGTTCAACGACGGCAACGTCAACCCGGGCAGGCTGAAGGCACCC G . PASS AC=25;AF=0.116;AN=216;ANN=G|disruptive_inframe_deletion|MODERATE|PPE24_Rv1753c|gene1796|transcript|Transcript_gene1796|Coding|1/1|c.1578_1655delGGGTGCCTTCAGCCTGCCCGGGTTGACGTTGCCGTCGTTGAACATCCCGGCCGCCACCACACCAGCCAACATCACCGT|p.Gly527_Val552del|1655/3162|1578/3162|526/1053||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1983121_1983198delACGGTGATGTTGGCTGGTGTGGTGGCGGCCGGGATGTTCAACGACGGCAACGTCAACCCGGGCAGGCTGAAGGCACCC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1983121_1983198delACGGTGATGTTGGCTGGTGTGGTGGCGGCCGGGATGTTCAACGACGGCAACGTCAACCCGGGCAGGCTGAAGGCACCC||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:32:1:1:0:7:14.29%:8:5E-1:35:6:4:2:7 0/0:0:0:0:0:10:0%:17:1E0:40:10:7:3:12 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 0/1:41:16:11:5:22:69.57%:66:2.4726E-7:39:7:4:3:23 0/1:49:13:9:4:16:81.25%:57:1.6121E-6:34:3:3:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:12:0%:21:1E0:43:12:9:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:17:7:10:27:60.71%:66:2.1913E-7:41:11:5:6:28 0/0:38:1:0:1:8:12.5%:8:5E-1:39:7:4:3:10 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:17 0/0:38:1:1:0:13:7.69%:18:5E-1:37:12:6:6:14 0/0:0:0:0:0:13:0%:25:1E0:35:13:11:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:45:9:5:4:14:64.29%:35:2.8986E-4:40:5:2:3:15 0/0:0:0:0:0:12:0%:21:1E0:40:12:7:5:14 0/1:49:13:7:6:18:72.22%:54:3.7078E-6:35:5:3:2:18 0/0:0:0:0:0:12:0%:21:1E0:37:12:10:2:13 0/0:36:2:0:2:18:11.11%:18:2.4286E-1:37:16:15:1:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:41:10:8:2:11 0/0:0:0:0:0:7:0%:14:1E0:34:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:40:8:6:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:8:0%:14:1E0:37:8:7:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:42:8:1:7:14:57.14%:30:9.6618E-4:32:6:4:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:37:9:6:3:9 0/0:0:0:0:0:13:0%:25:1E0:37:13:7:6:14 0/0:0:0:0:0:9:0%:18:1E0:37:9:6:3:10 0/0:34:1:0:1:19:5.26%:28:5E-1:36:18:10:8:19 0/0:36:2:1:1:15:13.33%:16:2.4138E-1:37:13:6:7:15 0/1:41:16:9:7:26:59.26%:62:6.1806E-7:37:11:3:8:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:12 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:10 0/0:0:0:0:0:9:0%:18:1E0:35:9:6:3:9 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:13 0/0:38:1:1:0:8:12.5%:8:5E-1:35:7:3:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:1:1:0:8:12.5%:8:5E-1:35:7:5:2:9 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:14 0/0:0:0:0:0:15:0%:29:1E0:34:15:10:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:40:10:4:6:11 0/0:0:0:0:0:7:0%:14:1E0:36:7:6:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:60:1:1:0:10:10%:11:5E-1:33:9:6:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:14 0/1:41:22:13:9:33:62.86%:87:1.7197E-9:40:13:8:5:35 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:9:5:4:15:56.25%:33:4.0786E-4:36:7:3:4:16 0/0:35:2:1:1:20:10%:21:2.4359E-1:36:18:9:9:20 0/1:42:14:6:8:17:82.35%:63:4.8851E-7:36:3:1:2:17 0/1:41:19:12:7:24:76%:82:5.8245E-9:35:6:3:3:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:11 0/0:0:0:0:0:9:0%:18:1E0:34:9:4:5:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:38:14:11:3:15 0/0:0:0:0:0:21:0%:40:1E0:38:21:18:3:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:7 0/0:0:0:0:0:12:0%:21:1E0:38:12:7:5:12 0/1:42:12:3:9:15:80%:52:5.2605E-6:36:3:0:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:11 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:41:8:6:2:9 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:14 0/0:0:0:0:0:9:0%:18:1E0:35:9:5:4:9 0/0:0:0:0:0:8:0%:14:1E0:44:8:4:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:11 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:1:0:16:6.25%:21:5E-1:35:15:11:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:31:12:5:7:15:66.67%:48:1.4831E-5:40:6:1:5:18 0/0:0:0:0:0:9:0%:18:1E0:36:9:5:4:10 0/0:0:0:0:0:10:0%:17:1E0:35:10:6:4:10 0/0:0:0:0:0:9:0%:18:1E0:34:9:7:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:14 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:36:13:11:2:13 0/0:38:1:0:1:7:14.29%:8:5E-1:35:6:4:2:7 0/0:0:0:0:0:8:0%:14:1E0:40:8:7:1:8 0/0:0:0:0:0:11:0%:22:1E0:34:11:8:3:12 0/1:38:19:13:6:24:79.17%:84:3.6826E-9:37:5:3:2:25 0/0:33:1:1:0:10:10%:11:5E-1:35:9:7:2:10 0/1:34:13:0:13:17:72.22%:54:3.7078E-6:45:5:2:3:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:40:10:5:5:14:71.43%:41:7.6278E-5:33:4:2:2:14 0/1:38:10:5:5:11:83.33%:44:3.3652E-5:34:2:1:1:13 0/0:37:1:1:0:13:7.69%:18:5E-1:36:12:6:6:14 0/1:35:8:6:2:13:57.14%:30:9.6618E-4:34:6:2:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:36:11:9:2:11 0/0:0:0:0:0:18:0%:32:1E0:35:18:12:6:18 0/0:0:0:0:0:8:0%:14:1E0:40:8:2:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:39:9:5:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:33:7:6:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:33:8:4:4:8 0/0:34:1:0:1:12:8.33%:14:5E-1:39:11:6:5:14 0/1:41:11:6:5:16:68.75%:44:3.3854E-5:36:5:2:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:14:0%:25:1E0:36:14:6:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:34:8:6:2:8 0/0:0:0:0:0:8:0%:14:1E0:36:8:7:1:8 0/0:38:1:0:1:13:7.69%:18:5E-1:39:12:5:7:16 0/0:36:2:1:1:37:5.41%:50:2.4658E-1:35:35:16:19:37 0/0:0:0:0:0:9:0%:18:1E0:35:9:5:4:9 0/1:39:13:6:7:20:65%:51:6.4422E-6:35:7:3:4:20 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:19 0/0:0:0:0:0:8:0%:14:1E0:37:8:6:2:8 0/1:36:13:10:3:17:76.47%:55:2.5647E-6:35:4:3:1:17 0/0:0:0:0:0:16:0%:29:1E0:35:16:12:4:16 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:17 0/0:0:0:0:0:11:0%:22:1E0:38:11:6:5:11 0/0:0:0:0:0:7:0%:14:1E0:37:7:3:4:7 0/1:45:11:5:6:19:57.89%:42:6.2811E-5:36:8:4:4:19 0/1:39:22:11:11:32:68.75%:90:8.0292E-10:34:10:5:5:33 0/0:38:1:0:1:12:8.33%:14:5E-1:35:11:7:4:13 0/0:0:0:0:0:10:0%:17:1E0:35:10:6:4:10 MTB_anc 1983195 . A G . PASS AC=234;AF=1.00;AN=234;ANN=G|synonymous_variant|LOW|PPE24_Rv1753c|gene1796|transcript|Transcript_gene1796|Coding|1/1|c.1581T>C|p.Gly527Gly|1581/3162|1581/3162|527/1053||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1983195A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1983195A>G||||||;HET=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:16:9:7:17:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 1/1:39:6:4:2:7:100%:29:1.0823E-3:0:0:0:0:7 1/1:40:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 1/1:40:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:8:3:5:9:100%:41:7.77E-5:0:0:0:0:9 1/1:40:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:17:8:9:19:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:37:8:3:5:9:100%:41:7.77E-5:0:0:0:0:9 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:29:13:16:30:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:12:7:5:14:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:4:7:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:7:4:3:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:12:5:7:13:100%:64:3.698E-7:0:0:0:0:13 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 1/1:36:18:4:14:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:43:24:11:13:26:100%:99:3.101E-14:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 1/1:41:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:12:4:8:13:92.31%:64:3.698E-7:0:0:0:0:13 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:6:3:3:7:100%:29:1.0823E-3:0:0:0:0:7 1/1:44:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:22:17:5:23:100%:99:4.7526E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:10:4:6:11:100%:52:5.4125E-6:0:0:0:0:12 1/1:46:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:39:13:5:8:14:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:7:6:1:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:12:7:5:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:11:6:5:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:16:10:6:18:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 1/1:40:12:8:4:13:100%:64:3.698E-7:0:0:0:0:13 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 MTB_anc 1983198 . C G . PASS AC=232;AF=1.00;AN=232;ANN=G|synonymous_variant|LOW|PPE24_Rv1753c|gene1796|transcript|Transcript_gene1796|Coding|1/1|c.1578G>C|p.Val526Val|1578/3162|1578/3162|526/1053||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1983198C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1983198C>G||||||;HET=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:17:9:8:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 1/1:41:6:4:2:7:100%:29:1.0823E-3:0:0:0:0:7 1/1:42:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:9:3:6:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:8:9:19:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:38:8:3:5:9:100%:41:7.77E-5:0:0:0:0:9 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:31:13:18:32:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:12:7:5:14:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:4:8:13:92.31%:58:1.3461E-6:60:1:1:0:13 1/1:45:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:8:4:4:9:100%:41:7.77E-5:0:0:0:0:9 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:5:7:13:100%:64:3.698E-7:0:0:0:0:13 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 1/1:36:19:5:14:20:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:43:24:11:13:26:100%:99:3.101E-14:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:43:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:6:3:3:7:100%:29:1.0823E-3:0:0:0:0:7 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:12:8:4:13:92.31%:64:3.698E-7:0:0:0:0:13 1/1:46:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:24:18:6:25:100%:99:3.101E-14:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:9:3:6:11:90%:42:5.9538E-5:60:1:1:0:12 1/1:44:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:39:13:5:8:14:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:8:6:2:9:100%:41:7.77E-5:0:0:0:0:9 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:12:7:5:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:11:6:5:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:16:9:7:18:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:22 1/1:44:11:8:3:12:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 MTB_anc 1989502 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|cut1_Rv1758|gene1798|transcript|Transcript_gene1798|Coding|1/1|c.461A>G|p.Asn154Ser|461/525|461/525|154/174||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1989502A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.1989502A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:18:0%:32:1E0:50:18:12:6:18 0/0:0:0:0:0:35:0%:67:1E0:47:35:20:15:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:39:0%:74:1E0:49:39:20:19:39 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:28 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:39:0%:74:1E0:49:39:19:20:40 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:53 0/0:0:0:0:0:19:0%:37:1E0:51:19:10:9:19 0/0:0:0:0:0:49:0%:93:1E0:46:49:27:22:50 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:31 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:18 0/0:0:0:0:0:26:0%:47:1E0:42:26:5:21:26 0/0:0:0:0:0:20:0%:36:1E0:42:20:6:14:21 0/0:0:0:0:0:26:0%:47:1E0:48:26:16:10:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:32 0/0:0:0:0:0:53:0%:99:1E0:43:53:28:25:55 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:24 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:13:0%:25:1E0:49:13:7:6:13 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:39 0/0:0:0:0:0:31:0%:59:1E0:48:31:11:20:31 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:29 0/0:0:0:0:0:22:0%:40:1E0:44:22:16:6:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 0/0:0:0:0:0:49:0%:93:1E0:42:49:19:30:49 0/0:0:0:0:0:43:0%:82:1E0:47:43:28:15:44 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:51:0%:97:1E0:45:51:20:31:51 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:41 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:28:11:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:30 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:46 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:39 0/0:0:0:0:0:48:0%:89:1E0:49:48:24:24:48 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:11:28:39 0/0:0:0:0:0:18:0%:32:1E0:50:18:8:10:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:25 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:44 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:39:0%:74:1E0:48:39:22:17:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:42 0/0:0:0:0:0:50:0%:92:1E0:40:50:32:18:50 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:33 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:25:0%:48:1E0:53:25:9:16:25 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:44 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:63:0%:99:1E0:45:63:29:34:64 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:47 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:33 0/0:0:0:0:0:15:0%:29:1E0:48:15:12:3:15 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:35 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:42 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:30 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:42 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:35 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:39 1/1:41:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:27 0/0:0:0:0:0:55:0%:99:1E0:42:55:33:22:58 0/0:0:0:0:0:66:0%:99:1E0:42:66:32:34:67 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:38 0/0:0:0:0:0:60:0%:99:1E0:41:60:27:33:60 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:47 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:34 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:42 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:41 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:28 0/0:0:0:0:0:53:0%:99:1E0:38:53:27:26:56 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:41 0/0:0:0:0:0:15:0%:29:1E0:39:15:6:9:16 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:48 0/0:0:0:0:0:34:0%:62:1E0:43:34:12:22:34 MTB_anc 1990361 . G A . PASS AC=260;AF=1.00;AN=260;ANN=A|synonymous_variant|LOW|wag22_Rv1759c|gene1799|transcript|Transcript_gene1799|Coding|1/1|c.2217C>T|p.Gly739Gly|2217/2745|2217/2745|739/914||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1990361G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1990361G>A||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:24:21:3:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:15 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:14:11:3:15:93.33%:69:1.0315E-7:38:1:1:0:16 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:39:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:10:9:1:11:90.91%:52:5.4125E-6:0:0:0:0:11 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:23:20:3:24:95.83%:99:1.2146E-13:0:0:0:0:26 1/1:37:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:10 1/1:38:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:36:11:7:4:12:91.67%:58:1.4176E-6:0:0:0:0:15 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:26:23:3:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 MTB_anc 1990686 . GCCCCGCCGAC G . PASS AC=195;AF=0.780;AN=250;ANN=G|frameshift_variant|HIGH|wag22_Rv1759c|gene1799|transcript|Transcript_gene1799|Coding|1/1|c.1882_1891delGTCGGCGGGG|p.Val628fs|1891/2745|1882/2745|628/914||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1990687_1990696delCCCCGCCGAC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1990687_1990696delCCCCGCCGAC||||||;LOF=(wag22_Rv1759c|gene1799|1|1.00);set=variant-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:35:23:21:2:26:85.19%:99:1.6161E-11:34:4:2:2:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:17:12:5:20:85%:78:1.2848E-8:31:3:1:2:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:14:12:2:12:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:10:8:2:13:76.92%:42:5.3843E-5:33:3:1:2:13 0/1:39:7:6:1:8:87.5%:31:6.993E-4:33:1:1:0:8 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:16:15:1:16:94.12%:81:7.7134E-9:34:1:0:1:17 0/1:31:8:8:0:9:80%:34:3.5723E-4:29:2:2:0:11 1/1:36:15:13:2:16:93.75%:75:2.8282E-8:38:1:0:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:36:11:9:2:13:84.62%:49:1.0096E-5:32:2:1:1:13 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:19:17:2:21:90.48%:93:4.7003E-10:35:2:1:1:21 0/1:36:11:10:1:13:84.62%:49:1.0096E-5:36:2:0:2:14 1/1:35:22:18:4:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:36:13:10:3:14:92.86%:64:3.7391E-7:36:1:0:1:14 0/1:35:11:8:3:13:84.62%:49:1.0096E-5:35:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:10:8:2:13:76.92%:42:5.3843E-5:34:3:2:1:13 1/1:32:15:13:2:14:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:36:9:8:1:11:81.82%:39:1.1057E-4:33:2:0:2:11 1/1:37:12:11:1:13:92.31%:58:1.3461E-6:38:1:0:1:13 0/1:37:8:5:3:10:80%:34:3.5723E-4:49:2:0:2:10 1/1:34:12:11:1:11:100%:64:3.698E-7:0:0:0:0:12 0/1:36:13:11:2:16:81.25%:57:1.6121E-6:42:3:1:2:16 1/1:35:20:16:4:20:95.24%:99:4.0873E-11:31:1:0:1:21 0/1:37:7:5:2:8:87.5%:31:6.993E-4:37:1:1:0:8 0/1:35:12:11:1:15:80%:52:5.2605E-6:33:3:1:2:15 0/1:37:15:14:1:18:83.33%:68:1.4655E-7:38:3:0:3:18 0/1:36:16:14:2:21:76.19%:69:1.2221E-7:35:5:3:2:21 0/1:35:14:13:1:16:87.5%:65:2.5454E-7:35:2:1:1:16 0/1:35:7:6:1:9:70%:28:1.548E-3:34:3:1:2:10 0/1:40:6:6:0:8:75%:24:3.4965E-3:34:2:1:1:8 1/1:36:9:6:3:10:90%:42:5.9538E-5:38:1:0:1:10 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 0/1:34:14:12:2:23:60.87%:54:3.4067E-6:35:9:5:4:24 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:36:10:9:1:13:76.92%:42:5.3843E-5:32:3:2:1:13 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:33:10:8:2:12:76.92%:42:5.3843E-5:36:3:2:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:9:2:11:91.67%:53:4.8074E-6:26:1:1:0:12 0/1:33:7:6:1:7:87.5%:31:6.993E-4:25:1:1:0:8 1/1:33:15:14:1:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:10:9:1:10:90.91%:47:1.7011E-5:33:1:0:1:11 1/1:32:9:9:0:9:90%:42:5.9538E-5:38:1:1:0:10 1/1:37:13:10:3:13:92.86%:64:3.7391E-7:35:1:0:1:15 1/1:34:12:10:2:12:92.31%:58:1.3461E-6:38:1:0:1:13 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:34:16:11:5:17:88.89%:76:2.0936E-8:32:2:2:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:18:14:4:20:90%:87:1.6758E-9:36:2:0:2:20 0/1:37:8:7:1:9:88.89%:36:2.0568E-4:37:1:1:0:9 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 0/1:37:8:8:0:9:88.89%:36:2.0568E-4:33:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:10:9:1:9:100%:52:5.4125E-6:0:0:0:0:11 0/1:36:6:5:1:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:38:11:8:3:13:84.62%:49:1.0096E-5:33:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:15:13:2:15:93.75%:75:2.8282E-8:35:1:0:1:16 1/1:34:12:11:1:12:92.31%:58:1.3461E-6:30:1:1:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:12:10:2:14:85.71%:55:2.9913E-6:33:2:1:1:14 1/1:35:9:9:0:8:100%:46:2.0568E-5:0:0:0:0:9 0/1:33:7:5:2:7:87.5%:31:6.993E-4:33:1:0:1:8 1/1:31:12:10:2:10:100%:64:3.698E-7:0:0:0:0:12 1/1:39:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:33:8:7:1:8:88.89%:36:2.0568E-4:38:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:34:8:6:2:8:88.89%:36:2.0568E-4:38:1:0:1:9 0/1:36:8:5:3:9:88.89%:36:2.0568E-4:60:1:1:0:9 0/1:37:11:11:0:13:84.62%:49:1.0096E-5:32:2:2:0:13 1/1:34:13:10:3:13:92.86%:64:3.7391E-7:38:1:1:0:14 0/1:35:6:4:2:7:85.71%:26:2.331E-3:34:1:0:1:7 1/1:36:18:15:3:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:35:13:8:5:13:92.86%:64:3.7391E-7:35:1:1:0:14 0/1:33:13:12:1:15:86.67%:60:8.7675E-7:35:2:1:1:15 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:36:14:12:2:17:82.35%:63:4.8851E-7:33:3:0:3:17 0/1:36:20:17:3:23:86.96%:95:3.1579E-10:31:3:2:1:23 1/1:33:14:13:1:14:93.33%:69:1.0315E-7:32:1:0:1:15 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:17:14:3:15:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:13:13:0:14:92.86%:64:3.7391E-7:34:1:0:1:14 1/1:33:11:9:2:11:91.67%:53:4.8074E-6:38:1:0:1:12 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:37:12:10:2:14:85.71%:55:2.9913E-6:34:2:1:1:14 0/1:35:13:9:4:14:86.67%:60:8.7675E-7:36:2:0:2:15 1/1:36:18:16:2:19:94.74%:92:5.6585E-10:34:1:1:0:19 0/1:34:19:16:3:23:79.17%:84:3.6826E-9:33:5:2:3:24 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:12:11:1:11:100%:64:3.698E-7:0:0:0:0:12 0/1:32:13:12:1:14:81.25%:57:1.6121E-6:28:3:2:1:17 0/1:35:11:8:3:12:84.62%:49:1.0096E-5:33:2:1:1:13 1/1:34:16:15:1:16:94.12%:81:7.7134E-9:38:1:0:1:17 0/1:32:15:13:2:16:88.24%:71:7.3277E-8:33:2:1:1:17 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:19:14:5:20:95%:98:1.5234E-10:32:1:0:1:20 0/1:36:7:7:0:8:87.5%:31:6.993E-4:35:1:0:1:8 1/1:34:20:15:5:21:90.91%:98:1.3117E-10:36:2:0:2:22 1/1:36:16:15:1:16:94.12%:81:7.7134E-9:33:1:0:1:17 1/1:38:11:8:3:12:91.67%:53:4.8074E-6:33:1:1:0:12 0/1:32:6:4:2:10:54.55%:22:5.418E-3:36:4:2:2:12 0/1:33:13:12:1:14:86.67%:60:8.7675E-7:35:2:0:2:15 0/1:34:9:7:2:11:81.82%:39:1.1057E-4:33:2:1:1:11 0/1:35:6:6:0:8:75%:24:3.4965E-3:28:2:2:0:8 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 0/1:33:10:10:0:11:83.33%:44:3.3652E-5:38:2:0:2:12 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:31:11:10:1:9:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:12:11:1:14:85.71%:55:2.9913E-6:31:2:2:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:10:8:2:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:32:11:9:2:9:100%:58:1.4176E-6:0:0:0:0:11 0/1:33:15:10:5:16:88.24%:71:7.3277E-8:38:2:0:2:17 1/1:33:14:9:5:14:93.33%:69:1.0315E-7:33:1:0:1:15 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:37:14:12:2:16:87.5%:65:2.5454E-7:34:2:1:1:16 1/1:33:13:12:1:13:92.86%:64:3.7391E-7:37:1:1:0:14 1/1:32:11:9:2:10:91.67%:53:4.8074E-6:38:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:17:16:1:19:89.47%:82:5.9414E-9:34:2:1:1:19 1/1:36:16:15:1:17:94.12%:81:7.7134E-9:35:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:10:10:0:9:100%:52:5.4125E-6:0:0:0:0:10 0/1:36:16:14:2:18:84.21%:73:4.357E-8:43:3:1:2:19 1/1:35:22:17:5:21:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:11:9:2:12:91.67%:53:4.8074E-6:33:1:0:1:12 MTB_anc 1992323 . G GC . PASS AC=8;AF=0.027;AN=298;ANN=GC|frameshift_variant|HIGH|wag22_Rv1759c|gene1799|transcript|Transcript_gene1799|Coding|1/1|c.254dupG|p.Ala86fs|254/2745|254/2745|85/914||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1992323_1992324insC||||||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.1992323_1992324insC||||||;HET=0;LOF=(wag22_Rv1759c|gene1799|1|1.00);set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:60:1:0:1:45:2.22%:73:5E-1:42:44:26:18:48 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:35:0%:67:1E0:46:35:11:24:35 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:16 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:18 0/0:60:1:0:1:19:5.26%:28:5E-1:45:18:11:7:19 0/0:37:1:0:1:34:2.94%:51:5E-1:49:33:17:16:34 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:10 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:9:0%:18:1E0:48:9:3:6:9 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:34 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:24 0/0:37:1:0:1:22:4.55%:31:5E-1:42:21:12:9:23 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:10 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:60:1:1:0:29:3.45%:45:5E-1:37:28:17:11:32 0/0:38:1:0:1:44:2.27%:69:5E-1:40:43:27:16:44 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:60:1:1:0:20:5%:27:5E-1:39:19:10:9:20 0/0:37:1:0:1:42:2.38%:66:5E-1:40:41:26:15:43 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:21 0/0:49:1:0:1:21:4.76%:31:5E-1:41:20:10:10:21 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:17 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:31 0/0:34:2:1:1:36:5.56%:47:2.4648E-1:39:34:22:12:38 0/0:34:1:0:1:42:2.38%:66:5E-1:38:41:24:17:42 0/0:0:0:0:0:17:0%:33:1E0:47:17:5:12:17 0/0:38:1:1:0:28:3.57%:41:5E-1:42:27:15:12:28 0/0:60:1:0:1:26:3.85%:38:5E-1:46:25:13:12:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:29 0/0:0:0:0:0:25:0%:48:1E0:36:25:15:10:25 0/0:36:2:2:0:51:3.85%:74:2.4757E-1:42:50:28:22:54 0/0:38:1:0:1:34:2.94%:51:5E-1:39:33:11:22:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:41 0/0:0:0:0:0:16:0%:29:1E0:37:16:6:10:18 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:16 0/0:60:1:1:0:25:4%:34:5E-1:38:23:11:12:25 0/0:47:2:1:1:26:7.69%:30:2.451E-1:37:24:13:11:27 0/0:60:1:0:1:31:3.23%:48:5E-1:40:30:18:12:36 0/0:26:1:0:1:25:4%:38:5E-1:41:24:11:13:26 0/0:38:1:1:0:40:2.5%:62:5E-1:38:38:26:12:41 0/0:37:1:0:1:32:3.12%:48:5E-1:40:31:19:12:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:11:0%:22:1E0:46:11:6:5:13 0/0:38:1:1:0:34:2.94%:51:5E-1:35:33:20:13:38 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:38:1:0:1:27:3.7%:38:5E-1:41:25:14:11:27 0/0:60:1:1:0:24:4.17%:34:5E-1:40:23:11:12:25 0/0:0:0:0:0:41:0%:78:1E0:38:41:18:23:41 0/0:0:0:0:0:39:0%:74:1E0:38:39:18:21:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:28 0/0:33:1:0:1:31:3.23%:48:5E-1:40:30:14:16:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:26:1:0:1:42:2.38%:66:5E-1:41:41:21:20:45 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:35 0/0:60:1:1:0:16:6.25%:21:5E-1:40:14:5:9:17 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:15 0/0:37:1:0:1:21:4.76%:31:5E-1:44:20:10:10:21 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:17 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:15 0/0:37:1:0:1:32:3.12%:48:5E-1:46:31:15:16:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:37 0/0:38:1:0:1:20:5%:27:5E-1:39:19:12:7:20 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:28 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:20 0/0:37:1:0:1:20:5%:27:5E-1:39:19:11:8:20 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:37 0/0:37:1:1:0:33:3.03%:52:5E-1:36:32:23:9:33 0/0:60:1:1:0:25:4%:38:5E-1:45:24:16:8:25 0/0:0:0:0:0:30:0%:55:1E0:35:30:19:11:32 0/0:0:0:0:0:19:0%:37:1E0:40:19:15:4:23 0/0:37:1:0:1:30:3.33%:44:5E-1:42:29:16:13:30 0/0:0:0:0:0:12:0%:21:1E0:46:12:5:7:12 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:44:26:15:11:28 0/0:38:1:1:0:35:2.86%:51:5E-1:42:33:18:15:38 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:21 0/0:0:0:0:0:37:0%:70:1E0:37:37:10:27:37 0/0:37:1:1:0:31:3.23%:48:5E-1:40:30:13:17:31 0/0:0:0:0:0:49:0%:93:1E0:39:49:28:21:50 0/0:37:1:0:1:21:4.76%:31:5E-1:42:20:10:10:22 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:40:0%:74:1E0:38:40:17:23:41 0/0:37:1:1:0:38:2.63%:58:5E-1:39:37:16:21:42 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:21 0/0:60:1:0:1:29:3.45%:45:5E-1:44:28:16:12:29 0/0:0:0:0:0:27:0%:52:1E0:34:27:16:11:27 1/1:35:31:22:9:32:93.94%:99:8.2416E-17:33:2:1:1:33 0/0:31:1:0:1:19:5.26%:28:5E-1:43:18:8:10:20 0/0:34:1:1:0:38:2.63%:58:5E-1:43:37:16:21:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:32 0/0:37:1:1:0:37:2.7%:59:5E-1:43:36:17:19:39 0/0:49:1:0:1:36:2.78%:55:5E-1:38:35:15:20:36 1/1:39:40:21:19:41:95.24%:99:9.8874E-23:31:1:0:1:42 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:34:1:1:0:26:3.85%:38:5E-1:36:25:11:14:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:30:1:1:0:24:4.17%:34:5E-1:38:23:12:11:27 0/0:0:0:0:0:30:0%:55:1E0:37:30:17:13:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:37 1/1:36:27:15:12:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:39:37:25:12:40:90.24%:99:1.1479E-19:31:3:1:2:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:19:0%:37:1E0:34:19:7:12:22 0/0:32:1:0:1:19:5.26%:28:5E-1:41:18:7:11:22 0/0:0:0:0:0:34:0%:62:1E0:36:34:17:17:36 0/0:0:0:0:0:23:0%:44:1E0:36:23:15:8:24 0/0:24:1:0:1:33:3.03%:52:5E-1:38:32:16:16:35 0/0:32:1:0:1:38:2.63%:59:5E-1:39:36:22:14:40 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:26 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:33 0/0:38:1:0:1:24:4.17%:34:5E-1:34:23:12:11:25 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:36 0/0:37:1:0:1:27:3.7%:41:5E-1:38:26:17:9:28 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:31 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:14 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:40 0/0:37:1:1:0:48:2.08%:76:5E-1:37:47:23:24:53 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:29 0/0:37:1:0:1:33:3.03%:52:5E-1:40:32:12:20:34 0/0:24:1:0:1:30:3.33%:44:5E-1:39:29:13:16:32 0/0:37:1:1:0:37:2.7%:59:5E-1:40:36:17:19:37 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:33:1:1:0:31:3.23%:48:5E-1:40:30:17:13:31 0/0:0:0:0:0:12:0%:21:1E0:35:12:7:5:12 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:32 0/0:38:1:0:1:27:3.7%:41:5E-1:43:26:14:12:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:38 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:20 MTB_anc 1994342 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1760_Rv1760|gene1800|transcript|Transcript_gene1800|Coding|1/1|c.1190T>C|p.Met397Thr|1190/1509|1190/1509|397/502||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1994342T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.1994342T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:52:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:50:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:50:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:44:22:22:45:97.78%:99:4.4304E-25:59:1:0:1:45 1/1:46:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:37:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:32:14:18:33:96.97%:99:4.7095E-18:37:1:1:0:35 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:49 MTB_anc 1998141 . C G . PASS AC=2;AF=1.00;AN=2;ANN=G|synonymous_variant|LOW|Rv1765c_Rv1765c|gene1803|transcript|Transcript_gene1803|Coding|1/1|c.375G>C|p.Gly125Gly|375/1098|375/1098|125/365||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1998141C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1998141C>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 1998300 . C T . PASS AC=24;AF=1.00;AN=24;ANN=T|synonymous_variant|LOW|Rv1765c_Rv1765c|gene1803|transcript|Transcript_gene1803|Coding|1/1|c.216G>A|p.Ser72Ser|216/1098|216/1098|72/365||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.1998300C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.1998300C>T||||||;HET=0;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 2000033 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|intergenic_region|MODIFIER|Rv1766_Rv1766-Rv1767_Rv1767|gene1804-gene1805|intergenic_region|gene1804-gene1805|||n.2000033G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:47 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:38:0%:70:1E0:46:38:12:26:38 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:42:0%:77:1E0:45:42:19:23:42 0/0:0:0:0:0:53:0%:99:1E0:43:53:22:31:53 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:52:0%:96:1E0:45:52:26:26:53 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:5:17:22 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:55:0%:99:1E0:41:55:20:35:56 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:38:1:1:0:42:2.38%:66:5E-1:44:41:24:17:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:39:1:1:0:39:2.56%:62:5E-1:41:38:17:21:39 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:41 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:32 0/0:0:0:0:0:69:0%:99:1E0:44:69:31:38:69 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:36:1:0:1:37:2.7%:59:5E-1:46:36:14:22:39 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:48:0%:89:1E0:43:48:17:31:48 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:39 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:33 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:21 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:42 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:38:1:1:0:50:2%:80:5E-1:45:49:22:27:51 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:21:9:30 0/0:0:0:0:0:50:0%:92:1E0:47:50:25:25:51 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:40 0/0:0:0:0:0:54:0%:99:1E0:43:54:24:30:54 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:36:0%:66:1E0:49:36:12:24:36 0/0:0:0:0:0:52:0%:96:1E0:44:52:19:33:53 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:18 0/0:39:1:1:0:19:5.26%:28:5E-1:47:18:11:7:19 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:0:0:0:0:47:0%:89:1E0:49:47:24:23:48 0/0:0:0:0:0:40:0%:74:1E0:45:40:13:27:40 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:16 0/0:0:0:0:0:31:0%:59:1E0:44:31:10:21:31 0/0:0:0:0:0:40:0%:74:1E0:46:40:15:25:40 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:33 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:48 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:41 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:35 0/0:0:0:0:0:31:0%:59:1E0:48:31:14:17:34 0/0:0:0:0:0:29:0%:55:1E0:52:29:13:16:30 0/0:0:0:0:0:45:0%:85:1E0:39:45:17:28:46 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:53:0%:99:1E0:43:53:30:23:55 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:26 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:16:0%:29:1E0:41:16:7:9:16 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:26 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:44 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:47:0%:89:1E0:40:47:17:30:50 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:27 0/0:0:0:0:0:54:0%:99:1E0:43:54:21:33:56 0/0:0:0:0:0:56:0%:99:1E0:43:56:34:22:56 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:39 0/0:0:0:0:0:54:0%:99:1E0:43:54:20:34:56 0/0:0:0:0:0:39:0%:74:1E0:38:39:23:16:43 0/0:0:0:0:0:58:0%:99:1E0:41:58:25:33:60 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:41 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:38 0/0:0:0:0:0:42:0%:77:1E0:39:42:21:21:43 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:77:0%:99:1E0:40:77:33:44:78 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:44 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:8:18:28 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:42 0/0:0:0:0:0:28:0%:51:1E0:42:28:8:20:28 0/0:0:0:0:0:18:0%:32:1E0:41:18:5:13:19 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:52:0%:96:1E0:42:52:25:27:52 0/0:0:0:0:0:59:0%:99:1E0:43:59:23:36:60 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 MTB_anc 2001637 . C T . PASS AC=16;AF=0.056;AN=286;ANN=T|missense_variant|MODERATE|PE_PGRS31_Rv1768|gene1806|transcript|Transcript_gene1806|Coding|1/1|c.1024C>T|p.His342Tyr|1024/1857|1024/1857|342/618||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2001637C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2001637C>T||||||;HET=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:26:0%:47:1E0:36:26:5:21:26 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:7 0/0:0:0:0:0:32:0%:59:1E0:36:32:10:22:33 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:14 0/0:0:0:0:0:17:0%:33:1E0:36:17:3:14:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:39:9:3:6:9 0/0:0:0:0:0:13:0%:25:1E0:36:13:0:13:13 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:16 0/0:0:0:0:0:16:0%:29:1E0:38:16:3:13:17 0/0:0:0:0:0:12:0%:21:1E0:34:12:2:10:12 0/0:0:0:0:0:17:0%:33:1E0:37:17:2:15:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:15 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:11 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:10 0/0:0:0:0:0:10:0%:17:1E0:35:10:1:9:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:17:0%:33:1E0:35:17:3:14:18 0/0:0:0:0:0:9:0%:18:1E0:33:9:1:8:10 0/0:0:0:0:0:15:0%:29:1E0:37:15:1:14:15 0/0:0:0:0:0:14:0%:25:1E0:36:14:2:12:14 0/0:0:0:0:0:19:0%:37:1E0:36:19:2:17:19 0/0:0:0:0:0:18:0%:32:1E0:36:18:2:16:18 0/0:0:0:0:0:13:0%:25:1E0:40:13:3:10:14 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:13 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:15 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:14 0/0:0:0:0:0:11:0%:22:1E0:36:11:1:10:13 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:15 0/0:0:0:0:0:18:0%:32:1E0:35:18:4:14:18 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:16 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:11 0/0:0:0:0:0:19:0%:37:1E0:35:19:3:16:19 0/0:0:0:0:0:21:0%:40:1E0:35:21:7:14:21 0/0:0:0:0:0:12:0%:21:1E0:37:12:3:9:12 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:25 0/0:0:0:0:0:28:0%:51:1E0:35:28:6:22:28 0/0:0:0:0:0:20:0%:36:1E0:36:20:4:16:22 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:24 0/0:0:0:0:0:11:0%:22:1E0:36:11:1:10:13 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:15 0/0:0:0:0:0:21:0%:40:1E0:36:21:4:17:22 0/0:0:0:0:0:18:0%:32:1E0:36:18:1:17:20 0/0:0:0:0:0:16:0%:29:1E0:34:16:7:9:16 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:15 0/0:0:0:0:0:20:0%:36:1E0:36:20:5:15:20 0/0:0:0:0:0:17:0%:33:1E0:37:17:4:13:18 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:12 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:30 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:0:0:0:0:19:0%:37:1E0:36:19:4:15:19 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:16 0/0:0:0:0:0:27:0%:52:1E0:35:27:6:21:28 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:18 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:11 0/0:0:0:0:0:16:0%:29:1E0:38:16:3:13:16 0/0:0:0:0:0:22:0%:40:1E0:37:22:2:20:23 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 0/0:0:0:0:0:14:0%:25:1E0:38:14:3:11:14 0/0:0:0:0:0:17:0%:33:1E0:37:17:2:15:17 1/1:36:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:26:1:25:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 0/0:0:0:0:0:11:0%:22:1E0:34:11:1:10:12 0/0:34:1:0:1:8:12.5%:8:5E-1:50:7:5:2:10 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:22 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:13:0%:25:1E0:37:13:4:9:13 0/0:0:0:0:0:22:0%:40:1E0:38:22:5:17:22 0/0:0:0:0:0:18:0%:32:1E0:36:18:2:16:20 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:20 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:12 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:19 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:16 0/0:0:0:0:0:10:0%:17:1E0:39:10:3:7:12 0/0:0:0:0:0:21:0%:40:1E0:36:21:4:17:21 0/0:0:0:0:0:11:0%:22:1E0:34:11:3:8:11 0/0:0:0:0:0:17:0%:33:1E0:36:17:3:14:17 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:10 0/0:0:0:0:0:15:0%:29:1E0:35:15:2:13:17 0/0:0:0:0:0:12:0%:21:1E0:33:12:2:10:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:30:0%:55:1E0:36:30:8:22:30 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:12 0/0:0:0:0:0:14:0%:25:1E0:37:14:2:12:15 0/0:0:0:0:0:10:0%:17:1E0:39:10:3:7:10 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:34:0%:62:1E0:37:34:10:24:34 0/0:0:0:0:0:14:0%:25:1E0:36:14:3:11:14 0/0:0:0:0:0:9:0%:18:1E0:43:9:4:5:11 0/0:0:0:0:0:11:0%:22:1E0:36:11:2:9:14 0/0:0:0:0:0:20:0%:36:1E0:35:20:2:18:21 0/0:0:0:0:0:12:0%:21:1E0:36:12:1:11:12 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:15 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:27 0/0:0:0:0:0:14:0%:25:1E0:36:14:1:13:15 0/0:0:0:0:0:15:0%:29:1E0:36:15:0:15:15 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:13 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:14 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:25 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:13 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:17 0/0:0:0:0:0:14:0%:25:1E0:38:14:4:10:14 0/0:0:0:0:0:20:0%:36:1E0:37:20:3:17:21 0/0:0:0:0:0:12:0%:21:1E0:35:12:1:11:12 0/0:0:0:0:0:16:0%:29:1E0:35:16:2:14:17 0/0:0:0:0:0:17:0%:33:1E0:37:17:4:13:18 0/0:0:0:0:0:14:0%:25:1E0:35:14:2:12:14 0/0:0:0:0:0:16:0%:29:1E0:36:16:1:15:17 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:13 0/0:0:0:0:0:27:0%:52:1E0:37:27:3:24:28 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:14 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:17 0/0:0:0:0:0:15:0%:29:1E0:38:15:4:11:15 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:11 0/0:0:0:0:0:12:0%:21:1E0:35:12:2:10:13 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:10 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:8 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:9 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:8 0/0:0:0:0:0:15:0%:29:1E0:36:15:1:14:17 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:12 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:38:9:3:6:9 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 0/0:0:0:0:0:16:0%:29:1E0:38:16:1:15:16 0/0:0:0:0:0:16:0%:29:1E0:35:16:2:14:18 0/0:0:0:0:0:9:0%:18:1E0:35:9:1:8:10 0/0:35:1:0:1:24:4.17%:34:5E-1:36:23:2:21:24 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:14 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:15 0/0:0:0:0:0:12:0%:21:1E0:39:12:2:10:12 0/0:0:0:0:0:15:0%:29:1E0:36:15:1:14:15 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:27 0/0:0:0:0:0:17:0%:33:1E0:37:17:2:15:17 0/0:0:0:0:0:9:0%:18:1E0:34:9:2:7:9 0/0:0:0:0:0:19:0%:37:1E0:36:19:4:15:20 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:32 0/0:0:0:0:0:17:0%:33:1E0:34:17:3:14:18 0/0:0:0:0:0:8:0%:14:1E0:37:8:1:7:8 MTB_anc 2007502 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1773c_Rv1773c|gene1811|transcript|Transcript_gene1811|Coding|1/1|c.265C>T|p.His89Tyr|265/747|265/747|89/248||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2007502G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.2007502G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:52:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:48:20:28:48:100%:99:1.554E-28:0:0:0:0:51 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:19:16:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:46:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:61:26:35:61:100%:99:2.609E-36:0:0:0:0:61 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:55:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:14:18:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:48:29:19:48:100%:99:1.554E-28:0:0:0:0:51 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:38:26:12:39:97.44%:99:1.4697E-21:60:1:0:1:41 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 2009262 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|stop_gained|HIGH|Rv1775_Rv1775|gene1813|transcript|Transcript_gene1813|Coding|1/1|c.91C>T|p.Gln31*|91/819|91/819|31/272||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2009262C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2009262C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:16 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:46 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 0/0:0:0:0:0:37:0%:70:1E0:50:37:21:16:37 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:34:0%:62:1E0:47:34:22:12:34 0/0:0:0:0:0:31:0%:59:1E0:49:31:23:8:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:18:0%:32:1E0:51:18:12:6:18 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:24 0/0:0:0:0:0:24:0%:44:1E0:47:24:17:7:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:38:1:0:1:51:1.96%:84:5E-1:44:50:31:19:51 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:24 0/0:0:0:0:0:45:0%:85:1E0:46:45:26:19:45 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:48:26:20:6:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:44:0%:81:1E0:43:44:28:16:44 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:50 0/0:0:0:0:0:44:0%:81:1E0:46:44:24:20:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:43 0/0:0:0:0:0:41:0%:78:1E0:47:41:29:12:41 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:23 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:17:0%:33:1E0:47:17:11:6:17 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:46 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:45 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:24:8:32 0/0:0:0:0:0:49:0%:93:1E0:46:49:32:17:50 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 0/0:0:0:0:0:56:0%:99:1E0:45:56:38:18:56 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:45:0%:85:1E0:42:45:29:16:45 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:0:0:0:0:19:0%:37:1E0:49:19:13:6:19 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:42 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:43 0/0:0:0:0:0:36:0%:67:1E0:47:35:22:13:36 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:47:0%:89:1E0:44:47:30:17:47 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:41 0/0:0:0:0:0:11:0%:22:1E0:47:11:9:2:12 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:31 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:24 0/0:0:0:0:0:37:0%:70:1E0:44:37:25:12:37 0/0:0:0:0:0:22:0%:40:1E0:51:22:11:11:24 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:47 0/0:0:0:0:0:32:0%:59:1E0:45:32:11:21:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:41 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:18 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:21:8:29 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:24:10:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:24:9:33 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:23 0/0:0:0:0:0:43:0%:82:1E0:44:43:33:10:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:33 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:48 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:39 1/1:49:34:18:16:36:94.44%:99:1.5887E-18:38:2:2:0:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:55:0%:99:1E0:43:55:32:23:55 1/1:42:63:38:25:63:100%:99:1.657E-37:0:0:0:0:64 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:58:0%:99:1E0:43:58:28:30:59 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:52:0%:96:1E0:43:52:29:23:52 0/0:0:0:0:0:42:0%:77:1E0:41:42:28:14:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:40:0%:74:1E0:45:40:25:15:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:40 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:39 0/0:0:0:0:0:43:0%:82:1E0:41:43:30:13:44 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:60:0%:99:1E0:40:60:30:30:60 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:50 0/0:0:0:0:0:41:0%:78:1E0:41:41:26:15:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:49 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:48 MTB_anc 2010614 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|Rv1776c_Rv1776c-cyp144_Rv1777|gene1814-gene1815|intergenic_region|gene1814-gene1815|||n.2010614A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:55 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:40:20:20:41:97.56%:99:9.3017E-24:0:0:0:0:44 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:37:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:50:14:36:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:39:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:39:7:32:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:43:19:24:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 2017291 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|malQ_Rv1781c|gene1819|transcript|Transcript_gene1819|Coding|1/1|c.186G>A|p.Arg62Arg|186/2175|186/2175|62/724||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2017291C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2017291C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:53:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:44:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:64 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:60:32:28:60:100%:99:1.035E-35:0:0:0:0:62 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:48:15:33:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:59:20:39:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:45:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:38:20:18:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:37:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:63:21:42:63:100%:99:1.657E-37:0:0:0:0:64 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 MTB_anc 2019236 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|eccB5_Rv1782|gene1820|transcript|Transcript_gene1820|Coding|1/1|c.1497G>T|p.Pro499Pro|1497/1521|1497/1521|499/506||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2019236G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2019236G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|moxifloxacin_gatifloxacin_ofloxacin_levofloxacin|||n.2019236G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:35:18:17:36:97.22%:99:8.3613E-20:37:1:0:1:37 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:11:13:25:96%:99:3.101E-14:0:0:0:0:25 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:61:35:26:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:70:38:32:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:37:16:21:38:97.37%:99:5.7269E-22:0:0:0:0:40 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 2020144 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|eccC5_Rv1783|gene1821|transcript|Transcript_gene1821|Coding|1/1|c.888G>A|p.Glu296Glu|888/4176|888/4176|296/1391||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|moxifloxacin_gatifloxacin_ofloxacin_levofloxacin|||n.2020144G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2020144G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2020144G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:52:16:36:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:34:15:19:35:97.14%:99:3.2089E-19:29:1:0:1:38 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:12:15:28:96.43%:99:3.7915E-15:37:1:0:1:28 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:37:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:36:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:42:21:21:43:97.67%:99:5.9562E-25:0:0:0:0:44 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:47:10:37:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:31 MTB_anc 2022484 . C T . PASS AC=30;AF=0.100;AN=300;ANN=T|synonymous_variant|LOW|eccC5_Rv1783|gene1821|transcript|Transcript_gene1821|Coding|1/1|c.3228C>T|p.Val1076Val|3228/4176|3228/4176|1076/1391||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|moxifloxacin_gatifloxacin_ofloxacin_levofloxacin|||n.2022484C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2022484C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2022484C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:41:59:29:30:59 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:51:0%:97:1E0:46:51:27:24:51 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:18:0%:32:1E0:46:18:16:2:19 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:39 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:45 0/0:0:0:0:0:13:0%:25:1E0:50:13:7:6:14 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:40 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:46 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:48 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:23 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:16 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:49 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:23 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:61:0%:99:1E0:44:61:37:24:61 0/0:0:0:0:0:48:0%:89:1E0:45:48:26:22:48 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:45 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:40 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:46 0/0:0:0:0:0:54:0%:99:1E0:43:54:27:27:56 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:14:0%:25:1E0:43:14:5:9:15 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:44 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:46 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:43 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:44:35:25:10:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:59:0%:99:1E0:44:59:28:31:60 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:14:0%:25:1E0:44:14:10:4:14 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:15 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:40 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:33 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:19 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:49 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:41:0%:78:1E0:42:41:27:14:41 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:33 0/0:0:0:0:0:61:0%:99:1E0:40:61:32:29:61 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:42 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:39 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:45 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:16:0%:29:1E0:43:16:9:7:16 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:62:0%:99:1E0:39:62:38:24:63 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:18:0%:32:1E0:39:18:10:8:20 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:21 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:23:0%:44:1E0:40:23:16:7:23 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:17:6:23 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:32:0%:59:1E0:37:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:60:1:1:0:22:4.55%:31:5E-1:38:21:5:16:23 0/0:0:0:0:0:53:0%:99:1E0:41:53:26:27:54 0/0:0:0:0:0:60:0%:99:1E0:44:60:35:25:61 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:43:0%:82:1E0:39:43:25:18:43 0/0:0:0:0:0:42:0%:77:1E0:37:42:16:26:44 0/0:37:1:1:0:34:2.94%:51:5E-1:39:33:22:11:34 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:30 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:37 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 0/0:0:0:0:0:32:0%:59:1E0:37:32:14:18:34 1/1:37:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:44:0%:81:1E0:39:44:25:19:46 0/0:0:0:0:0:41:0%:78:1E0:38:41:23:18:41 0/0:0:0:0:0:39:0%:74:1E0:38:39:18:21:40 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:20 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:52:0%:96:1E0:38:52:28:24:55 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:29:1:1:0:30:3.33%:44:5E-1:39:29:14:15:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:50:0%:92:1E0:42:50:29:21:51 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:47 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 MTB_anc 2026148 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE25_Rv1787|gene1824|transcript|Transcript_gene1824|Coding|1/1|c.848C>T|p.Ala283Val|848/1098|848/1098|283/365||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2026148C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2026148C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:63:36:27:63:100%:99:1.657E-37:0:0:0:0:63 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:60 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:49:32:17:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:19:9:10:20:95%:98:1.5234E-10:38:1:1:0:22 1/1:42:72:42:30:72:100%:99:6.7558E-43:0:0:0:0:74 1/1:41:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:51 1/1:37:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:60:34:26:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:58:29:29:59:98.31%:99:1.6283E-34:0:0:0:0:61 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 2026480 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|PE18_Rv1788|gene1825|transcript|Transcript_gene1825|Coding|1/1|c.4T>C|p.Ser2Pro|4/300|4/300|2/99||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2026480T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2026480T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:43:24:19:44:97.73%:99:1.5066E-25:0:0:0:0:45 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:50:36:14:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:36:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:17:14:32:96.88%:99:1.8007E-17:60:1:0:1:33 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:45:26:19:46:97.83%:99:1.1441E-25:39:1:1:0:47 1/1:42:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 MTB_anc 2030521 . A T . PASS AC=296;AF=0.987;AN=300;ANN=T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2030521A>T||||||,T|intragenic_variant|MODIFIER|esxM_Rv1792|gene1829|gene_variant|gene1829|||n.2030521A>T||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:15:8:25:92%:99:7.7525E-13:33:1:1:0:25 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:24:10:14:26:92.31%:99:3.101E-14:0:0:0:0:26 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 0/1:43:14:6:8:16:87.5%:76:2.4927E-8:0:0:0:0:16 1/1:41:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:23:12:11:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:23 1/1:41:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:24:11:13:25:96%:99:3.101E-14:0:0:0:0:25 0/1:42:13:6:7:15:86.67%:70:9.6148E-8:0:0:0:0:15 1/1:42:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:16:7:9:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:25:14:11:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:23:14:9:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:43:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:45:12:8:4:13:92.31%:64:3.698E-7:0:0:0:0:13 1/1:40:31:12:19:33:93.94%:99:2.1486E-18:0:0:0:0:33 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:53:26:27:54:98.15%:99:2.2126E-30:60:1:1:0:54 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:24:13:11:26:92.31%:99:3.101E-14:0:0:0:0:27 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:37:18:19:39:94.87%:99:5.7269E-22:0:0:0:0:39 1/1:42:25:12:13:26:96.15%:99:5.4444E-14:37:1:1:0:26 0/1:42:33:19:14:37:89.19%:99:1.3852E-19:0:0:0:0:38 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:23:12:11:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:41:41:19:22:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:43:37:15:22:38:97.37%:99:5.7269E-22:0:0:0:0:39 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:30:17:13:33:90.91%:99:8.4556E-18:0:0:0:0:33 0/1:46:8:4:4:9:88.89%:41:7.77E-5:0:0:0:0:10 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:17:20:39:94.87%:99:5.7269E-22:0:0:0:0:39 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:12:22:35:97.14%:99:3.5146E-20:0:0:0:0:36 1/1:41:36:19:17:38:94.74%:99:2.2598E-21:0:0:0:0:38 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:19:11:8:20:95%:99:2.8292E-11:0:0:0:0:21 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:47:20:27:48:97.92%:99:6.1512E-28:0:0:0:0:49 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:37:16:21:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:42:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:36:16:20:37:97.3%:99:2.2598E-21:0:0:0:0:40 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:59:30:29:60:98.33%:99:4.1056E-35:0:0:0:0:61 1/1:42:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:53:26:27:54:98.15%:99:1.5943E-31:0:0:0:0:55 1/1:40:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:38:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:51:11:40:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 MTB_anc 2030848 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|esxN_Rv1793|gene1830|transcript|Transcript_gene1830|Coding|1/1|c.155A>G|p.Glu52Gly|155/285|155/285|52/94||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2030848A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2030848A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:63:0%:99:1E0:45:63:34:29:63 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:55:0%:99:1E0:45:55:26:29:56 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:33:1:1:0:34:2.94%:51:5E-1:47:33:17:16:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:17:0%:33:1E0:42:17:4:13:20 0/0:60:1:0:1:40:2.5%:62:5E-1:48:39:19:20:40 0/0:0:0:0:0:32:0%:59:1E0:49:32:15:17:33 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:47:38:22:16:38 0/0:0:0:0:0:30:0%:55:1E0:53:30:14:16:30 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:43 0/0:32:1:0:1:27:3.7%:41:5E-1:46:26:12:14:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:22:0%:40:1E0:49:22:7:15:23 0/0:0:0:0:0:30:0%:55:1E0:47:30:20:10:30 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:40 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:32:1:1:0:29:3.45%:45:5E-1:46:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:60:1:0:1:40:2.5%:62:5E-1:44:39:21:18:40 0/0:0:0:0:0:77:0%:99:1E0:45:77:44:33:78 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:60:1:0:1:42:2.38%:66:5E-1:45:41:21:20:43 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:41 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:44 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:46 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:60:1:1:0:33:3.03%:52:5E-1:43:32:15:17:33 0/0:0:0:0:0:28:0%:51:1E0:51:28:15:13:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:60:1:0:1:29:3.45%:45:5E-1:43:28:15:13:31 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:46 0/0:35:1:1:0:37:2.7%:59:5E-1:43:36:15:21:38 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 0/0:0:0:0:0:46:0%:85:1E0:46:46:27:19:46 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:41 0/0:0:0:0:0:67:0%:99:1E0:45:67:37:30:68 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:27 0/0:33:1:0:1:20:5%:27:5E-1:43:19:12:7:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:0:0:0:0:32:0%:59:1E0:49:32:10:22:33 0/0:0:0:0:0:42:0%:77:1E0:51:42:28:14:43 0/0:0:0:0:0:25:0%:48:1E0:51:25:9:16:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:12:22:35 0/0:33:1:0:1:39:2.56%:62:5E-1:46:38:19:19:41 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:45 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:36 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:39 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:40 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:36 0/0:39:1:0:1:44:2.27%:69:5E-1:45:43:27:16:47 0/0:49:2:1:1:39:5.13%:54:2.4675E-1:44:37:16:21:41 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:27 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:44 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:31 0/0:0:0:0:0:46:0%:85:1E0:46:46:21:25:46 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:26:12:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:46:0%:85:1E0:41:46:17:29:46 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:22 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:37:0%:70:1E0:40:37:13:24:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:32 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:19 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:47 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:40 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:36 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:31 0/0:39:1:0:1:46:2.17%:73:5E-1:42:45:20:25:48 0/0:60:1:0:1:40:2.5%:62:5E-1:45:39:22:17:41 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:44 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:45 0/0:37:1:1:0:37:2.7%:59:5E-1:42:36:17:19:40 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:50 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:52 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:35 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:19 0/0:0:0:0:0:62:0%:99:1E0:43:62:33:29:63 0/0:0:0:0:0:62:0%:99:1E0:42:62:27:35:64 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:49 0/0:0:0:0:0:32:0%:59:1E0:46:32:10:22:37 0/0:0:0:0:0:56:0%:99:1E0:42:56:29:27:57 0/0:32:1:1:0:43:2.33%:70:5E-1:39:42:22:20:46 0/0:0:0:0:0:51:0%:97:1E0:43:51:17:34:51 0/0:0:0:0:0:47:0%:89:1E0:42:47:18:29:49 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:56:0%:99:1E0:41:56:26:30:58 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:38 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:42 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:43 0/0:0:0:0:0:48:0%:89:1E0:39:48:34:14:50 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:47 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:44 0/1:43:9:3:6:55:16.36%:28:1.3694E-3:45:46:20:26:57 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:45 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:46 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:47 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:53 0/0:0:0:0:0:48:0%:89:1E0:42:48:24:24:51 MTB_anc 2039884 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE28_Rv1800|gene1837|transcript|Transcript_gene1837|Coding|1/1|c.432G>T|p.Trp144Cys|432/1968|432/1968|144/655||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2039884G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2039884G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:39:11:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:47:30:17:48:97.92%:99:6.1512E-28:0:0:0:0:50 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:46:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:59:39:20:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 2039901 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE28_Rv1800|gene1837|transcript|Transcript_gene1837|Coding|1/1|c.449C>T|p.Ala150Val|449/1968|449/1968|150/655||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2039901C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2039901C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:51:39:12:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:49:30:19:49:100%:99:3.925E-29:0:0:0:0:53 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:34:16:18:35:97.14%:99:3.2089E-19:38:1:0:1:35 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:13:10:24:95.83%:99:7.7525E-13:38:1:0:1:24 1/1:45:31:19:12:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:53:36:17:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:49:34:15:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:52:35:17:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:58:38:20:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:42:31:11:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:28:20:8:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:37:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 2040554 . A ACCG . PASS AC=2;AF=6.803e-03;AN=294;ANN=ACCG|disruptive_inframe_insertion|MODERATE|PPE28_Rv1800|gene1837|transcript|Transcript_gene1837|Coding|1/1|c.1102_1103insCCG|p.Lys368delinsThrGlu|1103/1968|1103/1968|368/655||,ACCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2040554_2040555insCCG||||||,ACCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2040554_2040555insCCG||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:33:2:0:2:17:11.76%:18:2.4242E-1:39:15:3:12:22 0/0:0:0:0:0:13:0%:25:1E0:44:13:5:8:17 0/0:33:1:0:1:23:4.35%:34:5E-1:40:22:6:16:27 0/0:0:0:0:0:10:0%:17:1E0:40:10:3:7:14 0/0:0:0:0:0:14:0%:25:1E0:43:14:3:11:16 0/0:0:0:0:0:13:0%:25:1E0:40:13:2:11:15 0/0:37:1:0:1:16:6.25%:21:5E-1:41:15:5:10:19 0/0:28:2:0:2:13:15.38%:13:2.4E-1:36:11:7:4:14 0/0:0:0:0:0:16:0%:29:1E0:43:16:4:12:20 0/0:33:1:0:1:22:4.55%:31:5E-1:42:21:9:12:24 0/0:0:0:0:0:15:0%:29:1E0:40:15:5:10:18 0/0:0:0:0:0:24:0%:44:1E0:42:24:5:19:24 0/0:0:0:0:0:15:0%:29:1E0:43:15:2:13:16 0/0:0:0:0:0:27:0%:52:1E0:39:27:7:20:32 0/0:0:0:0:0:8:0%:14:1E0:40:8:0:8:10 0/0:33:1:0:1:12:8.33%:14:5E-1:42:11:4:7:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:39:12:1:11:16 0/0:0:0:0:0:14:0%:25:1E0:41:14:4:10:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:2:0:2:14:14.29%:12:2.4074E-1:40:12:4:8:14 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:29 0/0:33:1:0:1:17:5.88%:24:5E-1:39:16:6:10:21 0/0:0:0:0:0:13:0%:25:1E0:41:13:2:11:16 0/0:20:1:0:1:19:5.26%:28:5E-1:41:18:4:14:23 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:15 0/0:34:2:0:2:9:22.22%:7:2.3529E-1:42:7:1:6:9 0/0:0:0:0:0:10:0%:17:1E0:47:10:4:6:11 0/0:20:1:0:1:10:10%:11:5E-1:42:9:2:7:12 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:14 0/0:33:2:0:2:17:11.76%:18:2.4242E-1:41:15:4:11:21 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:15 0/0:36:1:0:1:30:3.33%:44:5E-1:43:29:12:17:34 0/0:35:1:0:1:8:12.5%:8:5E-1:44:7:1:6:9 0/0:30:2:0:2:24:8.33%:27:2.4468E-1:42:22:8:14:29 0/0:0:0:0:0:12:0%:21:1E0:43:12:4:8:17 0/0:33:1:0:1:16:6.25%:21:5E-1:39:15:1:14:21 0/0:30:3:0:3:30:10%:31:1.1842E-1:39:26:10:16:36 0/1:31:8:0:8:27:28.57%:26:2.188E-3:43:20:7:13:30 0/0:0:0:0:0:17:0%:33:1E0:39:17:4:13:18 0/0:33:1:0:1:11:9.09%:14:5E-1:45:10:1:9:13 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:24 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:14 0/0:0:0:0:0:13:0%:25:1E0:43:13:3:10:15 0/0:35:1:0:1:13:7.69%:18:5E-1:34:12:2:10:14 0/0:0:0:0:0:15:0%:29:1E0:40:15:2:13:20 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:2:0:2:17:11.76%:18:2.4242E-1:41:15:2:13:22 0/0:0:0:0:0:18:0%:32:1E0:41:18:3:15:22 0/0:0:0:0:0:8:0%:14:1E0:40:8:1:7:10 0/0:0:0:0:0:10:0%:17:1E0:39:10:4:6:11 0/0:0:0:0:0:11:0%:22:1E0:44:11:1:10:12 0/0:20:2:0:2:17:11.76%:18:2.4242E-1:39:15:4:11:20 0/0:20:1:0:1:20:5%:27:5E-1:37:19:7:12:20 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:18 0/0:36:2:0:2:13:15.38%:13:2.4E-1:38:11:1:10:15 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:13 0/0:35:1:0:1:14:7.14%:17:5E-1:39:13:3:10:16 0/0:25:3:0:3:26:11.11%:28:1.1792E-1:42:24:5:19:28 0/0:38:3:0:3:13:23.08%:9:1.1E-1:39:10:3:7:15 0/0:0:0:0:0:11:0%:22:1E0:34:11:2:9:14 0/0:0:0:0:0:16:0%:29:1E0:41:16:3:13:18 0/0:23:2:0:2:16:12.5%:15:2.4194E-1:38:14:4:10:21 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:22 0/0:33:1:0:1:27:3.7%:41:5E-1:39:26:8:18:41 0/0:0:0:0:0:7:0%:14:1E0:43:7:3:4:8 0/0:33:1:0:1:23:4.35%:34:5E-1:40:22:7:15:26 0/0:0:0:0:0:8:0%:14:1E0:44:8:0:8:9 0/0:0:0:0:0:13:0%:25:1E0:46:13:3:10:15 0/0:35:1:0:1:22:4.55%:31:5E-1:41:21:7:14:29 0/0:33:1:0:1:15:6.67%:21:5E-1:38:14:6:8:18 0/0:20:1:0:1:8:12.5%:8:5E-1:40:7:2:5:8 0/0:26:3:0:3:18:16.67%:14:1.1429E-1:43:15:3:12:20 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:24 0/0:26:1:0:1:15:6.67%:21:5E-1:42:14:5:9:18 0/0:35:1:0:1:10:10%:11:5E-1:41:9:3:6:11 0/0:37:1:0:1:18:5.56%:24:5E-1:41:17:2:15:20 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:19 0/0:36:2:0:2:18:11.11%:18:2.4286E-1:40:16:1:15:19 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:14 0/0:0:0:0:0:17:0%:33:1E0:37:17:4:13:20 0/0:0:0:0:0:13:0%:25:1E0:39:13:4:9:13 0/1:34:7:0:7:20:33.33%:23:4.3101E-3:40:14:2:12:21 0/0:0:0:0:0:12:0%:21:1E0:42:12:2:10:14 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:21 0/0:0:0:0:0:14:0%:25:1E0:39:14:3:11:15 0/0:0:0:0:0:19:0%:37:1E0:44:19:3:16:22 0/0:33:1:0:1:18:5.56%:24:5E-1:41:17:7:10:20 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:20 0/0:0:0:0:0:19:0%:37:1E0:40:19:4:15:20 0/0:0:0:0:0:19:0%:37:1E0:41:19:4:15:20 0/0:0:0:0:0:26:0%:47:1E0:40:26:6:20:27 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:19 0/0:20:1:0:1:19:5.26%:28:5E-1:38:18:6:12:27 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:26 0/0:0:0:0:0:10:0%:17:1E0:40:10:1:9:11 0/0:0:0:0:0:14:0%:25:1E0:40:14:3:11:20 0/0:33:2:0:2:21:9.52%:25:2.439E-1:37:19:5:14:22 0/0:0:0:0:0:14:0%:25:1E0:41:14:4:10:16 0/0:0:0:0:0:14:0%:25:1E0:42:14:1:13:16 0/0:0:0:0:0:21:0%:40:1E0:38:21:4:17:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:4:13:18 0/0:37:1:0:1:19:5.26%:28:5E-1:37:18:6:12:22 0/0:0:0:0:0:14:0%:25:1E0:43:14:3:11:17 0/0:0:0:0:0:14:0%:25:1E0:44:14:3:11:16 0/0:0:0:0:0:16:0%:29:1E0:39:16:5:11:19 0/0:34:3:0:3:20:15%:16:1.1538E-1:35:17:2:15:22 0/0:0:0:0:0:9:0%:18:1E0:47:9:2:7:12 0/0:33:1:0:1:16:6.25%:21:5E-1:40:15:2:13:20 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:13 0/0:0:0:0:0:12:0%:21:1E0:41:12:0:12:14 0/0:34:2:0:2:20:10%:21:2.4359E-1:37:18:1:17:21 0/0:20:1:0:1:18:5.56%:24:5E-1:38:17:5:12:21 0/0:28:2:0:2:21:9.52%:25:2.439E-1:36:19:7:12:23 0/0:0:0:0:0:10:0%:17:1E0:39:10:5:5:12 0/0:33:1:0:1:11:9.09%:14:5E-1:37:10:3:7:11 0/0:33:1:0:1:25:4%:38:5E-1:39:24:6:18:27 0/0:36:3:0:3:11:27.27%:7:1.0714E-1:38:8:0:8:12 0/0:31:3:0:3:29:10.34%:31:1.1842E-1:38:26:10:16:36 0/0:26:2:0:2:37:5.41%:50:2.4658E-1:38:35:15:20:44 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:21 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:11 0/0:20:1:0:1:12:8.33%:14:5E-1:37:11:3:8:18 0/0:37:1:0:1:21:4.76%:31:5E-1:36:20:2:18:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:2:19:26 0/0:30:3:0:3:24:12.5%:22:1.1702E-1:37:21:5:16:24 0/0:37:3:0:3:23:13.04%:22:1.1667E-1:36:20:4:16:23 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:18 0/0:27:2:0:2:15:13.33%:16:2.4138E-1:36:13:5:8:17 0/0:33:2:0:2:17:11.76%:18:2.4242E-1:37:15:3:12:19 0/0:35:5:0:5:24:20.83%:14:2.4548E-2:39:18:1:17:26 0/0:33:1:0:1:23:4.35%:34:5E-1:37:22:6:16:25 0/0:35:1:0:1:20:5%:27:5E-1:38:19:5:14:23 0/0:28:1:0:1:17:5.88%:24:5E-1:36:16:4:12:21 0/0:35:1:0:1:17:5.88%:24:5E-1:36:16:4:12:18 0/0:34:2:0:2:32:6.25%:40:2.459E-1:38:29:7:22:32 0/0:20:1:0:1:18:5.56%:24:5E-1:41:17:5:12:19 0/0:0:0:0:0:25:0%:48:1E0:38:25:8:17:25 0/0:36:1:0:1:17:5.88%:24:5E-1:38:16:3:13:23 0/0:24:1:0:1:22:4.55%:31:5E-1:43:21:10:11:27 0/0:33:1:0:1:26:3.85%:38:5E-1:40:25:6:19:28 0/0:20:1:0:1:19:5.26%:28:5E-1:38:18:8:10:25 0/0:0:0:0:0:14:0%:25:1E0:39:14:3:11:17 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:33 0/0:24:1:0:1:18:5.56%:24:5E-1:41:17:7:10:22 0/0:26:2:0:2:21:9.52%:25:2.439E-1:41:19:3:16:25 0/0:37:3:0:3:33:9.09%:37:1.1923E-1:40:30:6:24:35 0/0:0:0:0:0:17:0%:33:1E0:38:17:3:14:20 0/0:37:1:0:1:13:7.69%:18:5E-1:37:12:3:9:15 MTB_anc 2042215 . TG T . PASS AC=68;AF=0.227;AN=300;ANN=T|frameshift_variant|HIGH|PPE29_Rv1801|gene1838|transcript|Transcript_gene1838|Coding|1/1|c.217delG|p.Ala73fs|217/1272|217/1272|73/423||INFO_REALIGN_3_PRIME,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2042216delG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2042216delG||||||;HET=0;LOF=(PPE29_Rv1801|gene1838|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:60:0%:99:1E0:45:60:33:27:61 0/0:0:0:0:0:17:0%:33:1E0:48:17:12:5:17 1/1:46:63:31:32:62:98.44%:99:2.7139E-36:34:1:0:1:64 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:49 0/0:0:0:0:0:36:0%:66:1E0:50:36:13:23:36 1/1:47:30:18:12:31:96.77%:99:6.8754E-17:35:1:0:1:31 0/0:0:0:0:0:20:0%:36:1E0:46:20:14:6:20 0/0:0:0:0:0:35:0%:67:1E0:48:35:22:13:35 0/0:0:0:0:0:38:0%:70:1E0:50:38:19:19:39 0/0:0:0:0:0:49:0%:93:1E0:45:49:30:19:49 0/0:0:0:0:0:27:0%:52:1E0:50:27:11:16:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:48 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:20:23:44:97.73%:99:1.7144E-24:60:1:0:1:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:21 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 1/1:51:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:53:0%:99:1E0:45:53:38:15:54 0/0:0:0:0:0:37:0%:70:1E0:50:37:22:15:37 0/0:0:0:0:0:51:0%:97:1E0:44:51:25:26:51 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:23:0%:44:1E0:49:23:9:14:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:31 1/1:47:26:15:11:27:96.3%:99:1.4382E-14:34:1:1:0:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:59:0%:99:1E0:47:59:32:27:59 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:47 1/1:41:38:22:16:37:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:41:0%:78:1E0:48:41:23:18:41 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:48 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:52:0%:96:1E0:43:52:30:22:53 0/0:0:0:0:0:31:0%:59:1E0:49:31:18:13:31 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:20 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:26:11:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:26:10:37 1/1:42:26:17:9:25:96.3%:99:1.4382E-14:60:1:1:0:27 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:46 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:47:0%:89:1E0:44:47:19:28:48 0/0:0:0:0:0:52:0%:96:1E0:44:52:22:30:55 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:61:0%:99:1E0:47:61:23:38:61 0/0:0:0:0:0:30:0%:55:1E0:46:30:10:20:30 0/0:0:0:0:0:51:0%:97:1E0:47:51:25:26:51 0/0:0:0:0:0:19:0%:37:1E0:52:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:49:35:15:20:36 0/0:0:0:0:0:34:0%:62:1E0:50:34:17:17:34 0/0:0:0:0:0:14:0%:25:1E0:45:14:5:9:15 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:40 0/0:0:0:0:0:57:0%:99:1E0:43:57:34:23:58 0/0:37:1:0:1:28:3.57%:41:5E-1:48:27:17:10:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:44:0%:81:1E0:47:44:28:16:44 1/1:41:31:12:19:30:96.88%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:24:9:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:39:1:1:0:44:2.27%:69:5E-1:46:43:26:17:45 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:49 1/1:47:26:11:15:26:96.3%:99:1.4382E-14:34:1:1:0:27 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:48 1/1:41:47:23:24:47:97.92%:99:7.6145E-27:33:1:1:0:48 1/1:44:37:15:22:36:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:30:0%:55:1E0:53:30:15:15:32 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:22:0%:40:1E0:51:22:16:6:22 0/0:0:0:0:0:54:0%:99:1E0:42:54:24:30:54 0/0:36:2:1:1:40:5%:53:2.4684E-1:47:38:23:15:40 0/0:0:0:0:0:61:0%:99:1E0:42:61:32:29:62 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 1/1:39:27:17:10:26:96.43%:99:3.7915E-15:33:1:0:1:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:37 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:29 1/1:50:28:12:16:27:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:36 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 1/1:37:30:20:10:28:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 1/1:41:32:13:19:33:96.97%:99:4.7095E-18:33:1:0:1:34 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:41:26:15:41:97.62%:99:2.5612E-23:33:1:0:1:42 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:38 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:55:0%:99:1E0:43:55:28:27:56 0/0:0:0:0:0:41:0%:78:1E0:47:41:25:16:42 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:45:0%:85:1E0:38:45:26:19:48 1/1:41:35:23:12:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:47:30:17:46:97.92%:99:7.6145E-27:32:1:1:0:48 1/1:40:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:43:24:19:42:97.73%:99:1.7144E-24:32:1:1:0:44 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:45 1/1:41:46:20:26:43:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:31 0/0:0:0:0:0:48:0%:89:1E0:41:48:30:18:48 1/1:39:43:18:25:40:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:46:0%:85:1E0:39:46:22:24:46 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:63:0%:99:1E0:39:63:31:32:65 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:41 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:47 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 1/1:44:30:13:17:29:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:37 1/1:44:49:24:25:48:98%:99:5.0549E-28:34:1:1:0:50 1/1:42:44:25:19:46:95.65%:99:2.7459E-24:47:2:1:1:46 1/1:48:22:11:11:24:91.67%:99:1.0078E-11:28:2:2:0:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:49 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 MTB_anc 2042411 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|PPE29_Rv1801|gene1838|transcript|Transcript_gene1838|Coding|1/1|c.411C>T|p.Ala137Ala|411/1272|411/1272|137/423||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2042411C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2042411C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:18:7:11:19:94.74%:92:5.6585E-10:38:1:1:0:20 1/1:46:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:50:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:25:15:10:27:92.59%:99:2.0853E-13:46:2:0:2:27 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:39:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:37:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:69:47:22:69:100%:99:4.233E-41:0:0:0:0:69 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:61:38:23:61:100%:99:2.609E-36:0:0:0:0:64 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 2049530 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2049530T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2049530T>G||||||,G|intergenic_region|MODIFIER|PE20_Rv1806-PPE32_Rv1808|gene1843-gene1844|intergenic_region|gene1843-gene1844|||n.2049530T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:47 0/0:0:0:0:0:19:0%:37:1E0:51:19:11:8:19 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 0/0:0:0:0:0:18:0%:32:1E0:45:18:6:12:19 0/0:0:0:0:0:32:0%:59:1E0:42:32:9:23:32 0/0:0:0:0:0:16:0%:29:1E0:41:16:4:12:16 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:28 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:11:21:33 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:0:0:0:0:37:0%:70:1E0:40:37:12:25:39 0/0:0:0:0:0:14:0%:25:1E0:45:14:6:8:14 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:52 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:17 0/0:0:0:0:0:25:0%:48:1E0:41:25:6:19:25 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:4:19:24 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:50 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:9:26:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:29:0%:55:1E0:47:29:10:19:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:20:0%:36:1E0:39:20:6:14:20 0/0:0:0:0:0:39:0%:74:1E0:40:39:13:26:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:35 0/0:0:0:0:0:47:0%:89:1E0:42:47:19:28:49 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:44 0/0:0:0:0:0:41:0%:78:1E0:46:41:15:26:42 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:37 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:10:24:36 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:17:0%:33:1E0:51:17:6:11:17 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:38 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:40 0/0:0:0:0:0:44:0%:81:1E0:40:44:15:29:47 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:9:25:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:31 0/1:39:8:4:4:27:29.63%:26:2.1337E-3:43:19:12:7:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:13:29:42 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:7:18:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:61:0%:99:1E0:44:61:26:35:62 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:19 0/0:0:0:0:0:43:0%:82:1E0:42:43:11:32:43 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:12:0%:21:1E0:46:12:9:3:12 0/0:0:0:0:0:34:0%:62:1E0:49:34:12:22:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:21:0%:40:1E0:53:21:10:11:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:10:23:34 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:5:20:26 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:44 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:35 0/0:0:0:0:0:15:0%:29:1E0:44:15:11:4:15 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:35 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:21 0/0:0:0:0:0:36:0%:66:1E0:40:36:12:24:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:51:0%:97:1E0:42:51:17:34:51 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:29 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:48 0/0:0:0:0:0:55:0%:99:1E0:45:55:28:27:56 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:25 0/0:0:0:0:0:39:0%:74:1E0:37:39:22:17:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:30 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:40 0/0:0:0:0:0:36:0%:66:1E0:37:36:20:16:38 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:43 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:43 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:42:0%:77:1E0:38:42:16:26:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:45 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:36 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:34 0/0:0:0:0:0:18:0%:32:1E0:46:18:4:14:18 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:41 0/0:0:0:0:0:56:0%:99:1E0:42:56:24:32:59 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:23 MTB_anc 2050061 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|PPE32_Rv1808|gene1844|transcript|Transcript_gene1844|Coding|1/1|c.141G>A|p.Ser47Ser|141/1230|141/1230|47/409||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2050061G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2050061G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:49:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:29:15:14:30:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:53:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:40:18:22:41:97.56%:99:9.8874E-23:60:1:1:0:41 1/1:42:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:35:20:15:36:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:54 1/1:39:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:63:37:26:63:100%:99:1.657E-37:0:0:0:0:63 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 2050822 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|PPE32_Rv1808|gene1844|transcript|Transcript_gene1844|Coding|1/1|c.902C>G|p.Ala301Gly|902/1230|902/1230|301/409||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2050822C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2050822C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:53:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:26:9:17:27:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:15:18:34:97.06%:99:1.3852E-19:0:0:0:0:36 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:17:15:34:94.12%:99:5.4567E-19:0:0:0:0:34 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:51:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:30:20:10:31:96.77%:99:6.8754E-17:38:1:1:0:31 1/1:43:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:52 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:50:23:27:51:98.04%:99:9.9117E-30:0:0:0:0:52 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 2052687 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|stop_gained&splice_region_variant|HIGH|PPE33_Rv1809|gene1845|transcript|Transcript_gene1845|Coding|1/1|c.1406C>G|p.Ser469*|1406/1407|1406/1407|469/468||WARNING_TRANSCRIPT_NO_STOP_CODON,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2052687C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2052687C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:30:15:15:31:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:61:26:35:61:100%:99:2.609E-36:0:0:0:0:61 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:52:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:63:34:29:63:100%:99:1.657E-37:0:0:0:0:66 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:53:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:68:36:32:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 MTB_anc 2061433 . T TCCGCCGGCG . PASS AC=110;AF=0.500;AN=220;ANN=TCCGCCGGCG|disruptive_inframe_insertion|MODERATE|PE_PGRS33_Rv1818c|gene1854|transcript|Transcript_gene1854|Coding|1/1|c.1233_1241dupCGCCGGCGG|p.Gly414_Phe415insAlaGlyGly|1241/1497|1241/1497|414/498||,TCCGCCGGCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2061433_2061434insCCGCCGGCG||||||,TCCGCCGGCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2061433_2061434insCCGCCGGCG||||||;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:12:7:5:18:66.67%:48:1.4831E-5:35:6:2:4:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:31:10:5:5:21:43.48%:35:2.8066E-4:35:13:7:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:11:10:1:16:68.75%:44:3.3854E-5:34:5:1:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:6:5:1:12:50%:22:6.192E-3:37:5:2:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:10:8:2:13:76.92%:42:5.3843E-5:35:3:2:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:10:7:3:16:55.56%:38:1.4831E-4:36:7:2:5:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:44:8:5:3:17:47.06%:28:1.3389E-3:34:9:4:5:17 0/1:33:8:6:2:10:72.73%:32:5.16E-4:42:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:30:14:8:6:19:63.64%:55:2.7817E-6:34:8:3:5:22 0/1:43:6:3:3:9:66.67%:24:3.4965E-3:60:2:0:2:9 0/1:36:8:4:4:11:72.73%:32:5.16E-4:34:3:2:1:11 0/1:31:9:5:4:9:81.82%:39:1.1057E-4:33:2:1:1:11 0/1:33:7:4:3:9:63.64%:27:1.935E-3:42:4:2:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:11:8:3:14:78.57%:49:1.0096E-5:36:2:0:2:14 0/1:33:7:6:1:13:50%:25:2.8986E-3:38:7:3:4:15 1/1:36:11:10:1:12:91.67%:53:4.8074E-6:38:1:1:0:12 0/1:32:10:9:1:15:62.5%:39:1.2413E-4:35:6:5:1:19 0/1:38:8:7:1:12:66.67%:31:6.7304E-4:35:4:2:2:13 0/1:38:6:6:0:8:75%:26:2.331E-3:37:1:1:0:8 1/1:37:11:8:3:12:91.67%:53:4.8074E-6:33:1:0:1:12 0/0:42:4:3:1:11:36.36%:4:4.5113E-2:42:7:4:3:11 0/1:38:10:9:1:20:50%:36:2.1796E-4:40:10:6:4:21 0/1:28:7:2:5:14:43.75%:24:3.3988E-3:35:9:4:5:17 0/1:37:19:16:3:24:79.17%:84:3.6826E-9:34:5:4:1:25 0/1:33:10:7:3:16:58.82%:38:1.4831E-4:34:7:4:3:17 0/1:35:16:13:3:22:69.57%:66:2.4726E-7:35:7:3:4:24 0/1:39:11:8:3:18:61.11%:43:4.3258E-5:34:6:3:3:19 0/1:37:14:9:5:21:66.67%:56:2.1998E-6:33:7:2:5:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:7:6:1:11:63.64%:27:1.935E-3:33:4:0:4:12 0/1:35:15:10:5:25:57.69%:57:1.7241E-6:34:11:6:5:27 0/1:32:13:9:4:14:81.25%:57:1.6121E-6:33:3:1:2:17 0/1:37:7:7:0:14:50%:25:2.8986E-3:39:7:3:4:14 0/1:37:10:7:3:14:71.43%:42:5.3843E-5:34:3:2:1:15 0/1:38:8:6:2:18:44.44%:28:1.4461E-3:35:10:6:4:18 0/1:32:7:4:3:12:53.85%:25:2.6087E-3:43:6:5:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:10:8:2:14:71.43%:41:7.6278E-5:35:4:2:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:4:3:8:77.78%:29:1.1312E-3:33:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:4:4:0:11:36.36%:4:4.5113E-2:34:7:3:4:11 0/0:26:5:2:3:9:45.45%:3:1.7544E-2:34:6:4:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:10:7:3:13:66.67%:40:9.995E-5:35:5:1:4:15 0/1:34:10:8:2:14:66.67%:40:9.995E-5:34:5:2:3:16 0/1:33:16:13:3:19:76.19%:69:1.2221E-7:35:5:1:4:21 0/1:32:9:7:2:12:64.29%:36:2.2883E-4:35:4:1:3:13 0/1:37:6:4:2:7:75%:24:3.4965E-3:28:2:1:1:8 0/0:36:5:4:1:11:45.45%:3:1.7544E-2:34:6:3:3:11 0/1:35:23:15:8:36:63.89%:92:5.9342E-10:33:13:5:8:36 0/1:33:6:4:2:9:60%:23:4.5249E-3:34:3:0:3:10 0/1:36:6:5:1:9:66.67%:23:4.5249E-3:34:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:6:0:12:50%:21:6.865E-3:39:6:2:4:12 0/1:34:9:6:3:13:64.29%:36:2.2883E-4:41:4:1:3:14 0/1:39:6:5:1:7:85.71%:26:2.331E-3:38:1:1:0:7 0/1:38:11:8:3:15:73.33%:46:2.4988E-5:41:4:3:1:15 0/1:36:6:5:1:12:50%:21:6.865E-3:35:6:1:5:12 0/1:38:8:4:4:12:61.54%:30:8.238E-4:31:5:1:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:12:10:2:16:70.59%:49:1.1285E-5:33:5:3:2:18 0/1:31:8:6:2:10:66.67%:31:6.7304E-4:48:4:1:3:12 0/1:35:10:7:3:18:55.56%:37:1.7215E-4:34:8:5:3:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:9:7:2:12:75%:37:1.6826E-4:35:3:2:1:12 1/1:37:13:13:0:14:92.86%:64:3.7391E-7:33:1:0:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:36:12:7:5:13:92.31%:58:1.3461E-6:37:1:1:0:13 0/1:37:9:8:1:13:69.23%:36:2.2883E-4:35:4:2:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:44:7:4:3:14:50%:25:2.8986E-3:35:7:2:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:12:10:2:14:80%:55:2.9913E-6:38:2:1:1:16 0/1:39:12:7:5:15:80%:52:5.2605E-6:34:3:1:2:15 0/1:38:16:9:7:17:88.89%:76:2.0936E-8:35:2:1:1:18 0/1:40:10:7:3:13:76.92%:42:5.3843E-5:40:3:1:2:13 0/1:38:17:11:6:20:85%:78:1.2848E-8:34:3:2:1:20 0/1:33:11:7:4:13:73.33%:46:2.4988E-5:34:4:2:2:15 0/1:35:9:7:2:14:60%:34:3.4983E-4:34:6:3:3:15 0/1:33:11:5:6:17:61.11%:42:5.2969E-5:34:7:6:1:19 0/1:38:14:10:4:20:70%:57:1.6702E-6:42:6:3:3:20 0/1:33:7:4:3:14:46.67%:25:3.1609E-3:35:8:3:5:15 0/1:34:14:9:5:24:53.85%:52:5.4595E-6:37:12:6:6:26 0/1:33:12:9:3:16:70.59%:49:1.1285E-5:36:5:2:3:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:11:6:5:11:84.62%:49:1.0096E-5:42:2:1:1:13 0/1:39:10:7:3:16:58.82%:38:1.4831E-4:37:7:6:1:20 0/1:38:13:7:6:21:59.09%:50:7.9741E-6:33:8:2:6:22 0/1:38:14:12:2:21:66.67%:56:2.1998E-6:36:7:2:5:23 0/1:32:17:11:6:19:80.95%:76:2.3502E-8:32:4:1:3:21 0/1:39:6:5:1:11:54.55%:22:6.192E-3:34:5:1:4:13 0/1:33:16:11:5:26:57.14%:61:7.3043E-7:35:12:6:6:28 0/0:32:3:1:2:9:33.33%:4:1.0294E-1:35:6:1:5:10 0/1:36:18:14:4:24:72%:75:2.6626E-8:36:7:3:4:27 0/1:40:10:8:2:12:76.92%:42:5.3843E-5:34:3:1:2:13 0/1:34:12:9:3:14:80%:52:5.2605E-6:31:3:3:0:17 0/1:46:7:4:3:9:77.78%:29:1.1312E-3:33:2:1:1:10 0/1:34:9:8:1:12:69.23%:36:2.2883E-4:34:4:2:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:6:4:2:13:46.15%:21:7.4534E-3:38:7:3:4:15 0/1:39:9:5:4:15:60%:34:3.4983E-4:35:6:3:3:15 0/1:36:18:14:4:24:75%:77:1.8413E-8:40:6:4:2:26 0/1:40:6:4:2:9:66.67%:23:4.5249E-3:34:3:1:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:6:2:4:7:85.71%:26:2.331E-3:33:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:32:6:3:3:9:66.67%:23:4.5249E-3:35:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:6:4:2:10:54.55%:22:6.192E-3:32:5:0:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:7:4:3:8:87.5%:31:6.993E-4:37:1:1:0:8 0/1:34:6:5:1:11:54.55%:22:5.418E-3:35:4:1:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:33:7:6:1:10:63.64%:27:1.935E-3:33:4:1:3:12 0/1:38:8:5:3:13:57.14%:30:9.6618E-4:32:6:4:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:8:5:3:10:80%:34:3.5723E-4:37:2:1:1:10 0/1:30:9:3:6:15:52.94%:33:4.6348E-4:34:8:5:3:18 0/1:46:8:6:2:12:66.67%:31:6.7304E-4:41:4:3:1:12 0/1:37:8:8:0:11:72.73%:32:5.16E-4:36:3:1:2:11 1/1:40:10:5:5:11:90.91%:47:1.7011E-5:33:1:0:1:11 0/1:39:12:10:2:17:70.59%:49:1.1285E-5:34:5:1:4:17 0/1:36:16:12:4:19:84.21%:73:4.357E-8:52:3:2:1:19 0/1:39:7:4:3:9:77.78%:29:1.1312E-3:37:2:1:1:9 0/1:38:11:6:5:12:84.62%:49:1.0096E-5:38:2:0:2:13 0/1:38:9:4:5:11:69.23%:36:2.2883E-4:35:4:2:2:13 0/1:36:12:10:2:14:85.71%:55:2.9913E-6:42:2:1:1:14 0/1:32:7:4:3:11:53.85%:25:2.6087E-3:32:6:1:5:14 MTB_anc 2061974 . C A . PASS AC=240;AF=1.00;AN=240;ANN=A|missense_variant|MODERATE|PE_PGRS33_Rv1818c|gene1854|transcript|Transcript_gene1854|Coding|1/1|c.701G>T|p.Gly234Val|701/1497|701/1497|234/498||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2061974C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2061974C>A||||||;HET=0;WT=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:32:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:16:13:3:17:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:11:7:4:12:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:12:12:0:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:34:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:28:24:4:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:18 1/1:34:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:33:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:33:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 2062805 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|PE_PGRS33_Rv1818c-bacA_Rv1819c|gene1854-gene1855|intergenic_region|gene1854-gene1855|||n.2062805C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:28:14:14:29:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:52:36:16:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:18:12:6:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:69:35:34:69:100%:99:4.233E-41:0:0:0:0:70 1/1:45:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:14:10:25:96%:99:3.101E-14:0:0:0:0:26 1/1:41:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:10:10:22:90.91%:99:7.2544E-12:0:0:0:0:22 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:52:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:44:36:20:16:37:97.3%:99:2.2598E-21:0:0:0:0:39 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 2062922 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|bacA_Rv1819c|gene1855|transcript|Transcript_gene1855|Coding|1/1|c.1807G>A|p.Val603Ile|1807/1920|1807/1920|603/639||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2062922C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2062922C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:44:11:33:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:67:30:37:67:100%:99:6.6743E-40:0:0:0:0:70 1/1:44:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:38:10:28:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:28 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:29:11:18:30:96.67%:99:2.6212E-16:37:1:0:1:30 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 2066633 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|secA2_Rv1821|gene1857|transcript|Transcript_gene1857|Coding|1/1|c.177C>G|p.Ser59Arg|177/2427|177/2427|59/808||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.2066633C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2066633C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2066633C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:48:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:30:15:15:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:53:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:11:16:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:61:26:35:61:100%:99:2.609E-36:0:0:0:0:63 1/1:40:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:39:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:58:21:37:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 MTB_anc 2067491 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|secA2_Rv1821|gene1857|transcript|Transcript_gene1857|Coding|1/1|c.1035C>T|p.Arg345Arg|1035/2427|1035/2427|345/808||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.2067491C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2067491C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2067491C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:51:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:53:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:40:19:21:41:97.56%:99:9.8874E-23:38:1:1:0:41 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:77:33:44:77:100%:99:6.8219E-46:0:0:0:0:77 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:35:17:18:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:40:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:52 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:44:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:27:11:16:28:96.43%:99:3.7915E-15:38:1:0:1:28 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:37:20:17:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 2072190 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|gcvH_Rv1826|gene1862|transcript|Transcript_gene1862|Coding|1/1|c.239C>A|p.Ala80Glu|239/405|239/405|80/134||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2072190C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2072190C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:55:28:27:56:98.21%:99:1.4593E-31:20:1:0:1:57 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:34:14:20:35:97.14%:99:3.2089E-19:20:1:1:0:35 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:63:37:26:63:100%:99:1.657E-37:0:0:0:0:63 1/1:51:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:73:36:37:73:100%:99:1.7006E-43:0:0:0:0:75 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:39:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:46:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 2074435 . TAGCGCGGCGACGATGCGCGCCGGGACGGCGGGCTGAGGAGGCGCGCGATAAGGCCG T . PASS AC=126;AF=0.420;AN=300;ANN=T|frameshift_variant&stop_lost&splice_region_variant|HIGH|Rv1829_Rv1829|gene1865|transcript|Transcript_gene1865|Coding|1/1|c.494_*54delAGCGCGGCGACGATGCGCGCCGGGACGGCGGGCTGAGGAGGCGCGCGATAAGGCCG|p.Ter165fs|494/495|494/495|165/164||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2074436_2074491delAGCGCGGCGACGATGCGCGCCGGGACGGCGGGCTGAGGAGGCGCGCGATAAGGCCG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2074436_2074491delAGCGCGGCGACGATGCGCGCCGGGACGGCGGGCTGAGGAGGCGCGCGATAAGGCCG||||||,T|intergenic_region|MODIFIER|Rv1829_Rv1829-Rv1830_Rv1830|gene1865-gene1866|intergenic_region|gene1865-gene1866|||n.2074436_2074491delAGCGCGGCGACGATGCGCGCCGGGACGGCGGGCTGAGGAGGCGCGCGATAAGGCCG||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:41:16:13:3:31:50%:59:1.2304E-6:44:16:11:5:32 0/0:44:5:2:3:20:25%:10:2.3562E-2:49:15:11:4:20 0/1:51:14:8:6:46:30.43%:47:1.9039E-5:43:32:16:16:47 0/1:46:7:5:2:21:33.33%:23:4.3101E-3:42:14:6:8:21 0/1:43:12:5:7:34:35.29%:41:7.5302E-5:38:22:16:6:34 0/0:50:6:2:4:20:30%:7:1.0098E-2:48:14:8:6:20 0/1:52:7:6:1:22:31.82%:23:4.4505E-3:48:15:11:4:23 0/1:49:8:1:7:23:33.33%:27:1.949E-3:42:16:12:4:24 0/1:48:10:3:7:25:40%:34:3.1821E-4:43:15:11:4:25 0/1:56:8:6:2:18:44.44%:28:1.4461E-3:45:10:3:7:18 0/1:48:19:13:6:43:44.19%:68:1.4658E-7:43:24:17:7:45 0/1:44:17:14:3:37:45.95%:61:6.9312E-7:44:20:12:8:38 0/0:0:0:0:0:11:0%:22:1E0:50:11:8:3:12 0/1:48:16:7:9:44:36.36%:55:2.8784E-6:40:28:21:7:45 0/1:46:19:8:11:38:50%:70:9.2415E-8:41:19:16:3:38 0/1:43:11:5:6:33:32.35%:37:1.8662E-4:41:23:12:11:35 0/1:49:12:7:5:23:52.17%:44:3.4748E-5:37:11:10:1:23 0/1:46:9:4:5:20:45%:32:6.1425E-4:41:11:8:3:21 0/1:45:11:5:6:24:45.83%:39:1.0135E-4:41:12:8:4:24 0/1:38:10:3:7:21:45.45%:35:2.6061E-4:42:12:11:1:22 0/1:46:16:3:13:25:64%:63:4.1493E-7:43:9:7:2:25 0/1:49:18:7:11:41:43.9%:64:3.454E-7:41:23:14:9:42 0/1:49:9:4:5:22:40.91%:31:7.0165E-4:47:13:9:4:22 0/1:47:10:4:6:30:33.33%:33:3.9851E-4:43:20:13:7:32 0/1:38:14:5:9:31:42.42%:49:1.0577E-5:43:19:13:6:34 0/0:47:5:3:2:15:33.33%:6:2.1073E-2:48:10:3:7:15 0/1:50:12:7:5:29:41.38%:42:5.8193E-5:45:17:12:5:30 0/0:49:5:3:2:17:29.41%:8:2.2239E-2:52:12:5:7:17 0/1:41:13:3:10:34:37.14%:45:3.1103E-5:45:22:14:8:35 0/0:60:1:0:1:23:4.35%:31:5E-1:43:21:14:7:23 0/1:43:22:9:13:43:51.16%:82:5.4836E-9:41:20:12:8:44 0/1:50:10:7:3:32:31.25%:33:4.259E-4:40:22:14:8:33 0/1:52:17:3:14:38:44.74%:61:7.5297E-7:42:21:7:14:39 0/1:39:11:4:7:25:40.74%:38:1.362E-4:40:16:9:7:28 0/1:51:17:11:6:39:43.59%:61:7.5297E-7:46:21:13:8:40 0/1:44:13:6:7:29:44.83%:46:2.1506E-5:42:16:7:9:29 0/1:48:12:5:7:41:29.27%:40:9.5339E-5:39:29:18:11:42 0/1:46:19:7:12:50:38%:66:2.2975E-7:42:31:24:7:51 0/1:47:16:9:7:40:40%:56:2.1927E-6:45:23:15:8:41 0/1:42:14:6:8:33:42.42%:49:1.0577E-5:43:19:15:4:35 0/1:49:12:7:5:34:35.29%:41:7.5302E-5:37:22:12:10:34 0/1:48:14:4:10:36:37.84%:48:1.3393E-5:43:23:13:10:39 0/1:46:7:3:4:19:36.84%:23:3.9926E-3:38:12:10:2:20 0/1:44:10:7:3:37:27.03%:33:4.8486E-4:43:27:16:11:38 0/1:40:16:8:8:33:45.71%:58:1.364E-6:45:17:13:4:36 0/1:45:14:7:7:32:43.75%:50:9.8512E-6:41:18:13:5:32 0/1:47:13:7:6:38:34.21%:44:3.5456E-5:44:25:17:8:38 0/1:40:13:6:7:36:34.21%:44:3.404E-5:43:24:11:13:38 0/1:45:22:12:10:47:46.81%:80:8.5409E-9:43:24:13:11:48 0/1:42:12:8:4:31:36.36%:41:7.2075E-5:44:21:15:6:33 0/1:53:9:8:1:18:50%:32:5.1645E-4:45:9:4:5:18 0/1:47:21:10:11:49:42.86%:75:2.6363E-8:41:26:16:10:51 0/0:52:6:3:3:20:30%:7:1.0098E-2:43:14:6:8:20 0/1:50:13:4:9:33:39.39%:45:2.8029E-5:41:20:13:7:33 0/1:44:15:12:3:33:45.45%:54:3.8647E-6:39:18:11:7:36 0/1:50:18:5:13:46:39.13%:63:4.7997E-7:41:28:18:10:46 0/1:48:9:5:4:33:26.47%:29:1.0644E-3:40:25:7:18:34 0/1:38:10:6:4:24:41.67%:35:2.9985E-4:44:14:11:3:24 0/1:48:12:7:5:26:46.15%:43:4.6796E-5:37:14:7:7:26 0/1:53:8:3:5:21:38.1%:27:1.638E-3:51:12:6:6:23 0/1:41:7:1:6:26:26.92%:23:4.9169E-3:43:19:14:5:26 0/1:41:15:8:7:24:60%:58:1.4522E-6:45:10:5:5:29 0/1:46:13:8:5:49:26.53%:43:4.8866E-5:39:36:24:12:49 0/1:51:8:6:2:29:27.59%:26:2.188E-3:50:20:10:10:29 0/1:46:15:10:5:28:51.72%:55:2.6068E-6:46:14:10:4:29 0/1:45:21:9:12:44:46.67%:76:2.2206E-8:43:24:11:13:45 0/0:37:4:2:2:18:21.05%:13:5.251E-2:44:15:10:5:19 0/1:46:17:10:7:45:36.96%:59:1.1805E-6:44:28:18:10:47 0/1:47:7:3:4:21:33.33%:23:4.3101E-3:45:14:9:5:21 0/0:53:3:1:2:19:15.79%:17:1.1486E-1:46:16:7:9:19 0/1:50:16:9:7:30:53.33%:60:9.7202E-7:46:14:7:7:30 0/1:49:15:5:10:34:42.86%:53:4.5018E-6:47:20:8:12:35 0/1:49:7:5:2:19:36.84%:23:3.9926E-3:48:12:7:5:19 0/1:49:22:12:10:40:55%:83:4.1855E-9:51:18:9:9:40 0/1:42:18:10:8:37:48.65%:66:2.432E-7:43:19:11:8:38 0/1:47:8:3:5:26:29.63%:26:2.1337E-3:43:19:15:4:27 0/0:40:5:1:4:31:16.13%:24:2.6257E-2:43:26:13:13:33 0/1:53:11:7:4:36:30.56%:37:1.9879E-4:41:25:14:11:36 0/1:48:9:3:6:44:20.45%:29:1.2263E-3:41:34:19:15:46 0/1:40:21:16:5:42:48.84%:77:1.8298E-8:42:22:16:6:45 0/1:46:15:8:7:29:50%:55:2.9161E-6:42:15:10:5:30 0/1:40:22:5:17:53:38.6%:77:1.9179E-8:43:35:24:11:59 0/1:46:13:5:8:35:36.11%:44:3.2589E-5:45:23:13:10:37 0/1:50:13:5:8:24:52%:48:1.4654E-5:42:12:6:6:25 0/1:44:20:9:11:48:41.67%:71:7.2254E-8:38:27:14:13:48 0/1:46:10:4:6:24:41.67%:35:2.9985E-4:39:14:10:4:25 0/1:50:13:8:5:26:50%:47:1.6379E-5:47:13:9:4:28 0/1:40:13:10:3:23:54.17%:48:1.2938E-5:51:11:7:4:24 0/1:46:12:7:5:29:41.38%:42:5.8193E-5:50:17:8:9:30 0/0:51:5:2:3:24:20.83%:14:2.4823E-2:48:19:10:9:24 0/1:42:15:9:6:29:50%:55:2.9161E-6:44:15:8:7:31 0/1:48:10:6:4:22:45.45%:35:2.6061E-4:50:12:8:4:22 0/1:44:18:11:7:45:40%:63:4.2568E-7:39:26:16:10:45 0/0:49:6:4:2:22:27.27%:9:1.057E-2:42:16:10:6:22 0/1:46:19:9:10:36:51.35%:70:8.2514E-8:34:18:10:8:37 0/1:51:8:3:5:20:40%:28:1.5455E-3:45:11:8:3:20 0/1:51:6:4:2:18:33.33%:20:9.5308E-3:35:12:5:7:19 0/0:49:5:3:2:19:26.32%:10:2.3166E-2:43:14:11:3:19 0/1:44:11:4:7:31:34.38%:37:1.7351E-4:41:21:13:8:33 0/1:46:11:4:7:29:37.93%:38:1.5195E-4:41:18:13:5:29 0/1:50:10:4:6:20:50%:36:2.1796E-4:42:10:5:5:21 0/1:51:13:5:8:36:36.11%:44:3.2589E-5:41:23:16:7:36 0/1:41:11:6:5:25:44%:39:1.1933E-4:41:14:7:7:25 0/1:46:10:6:4:35:28.57%:33:4.6276E-4:41:25:13:12:35 0/1:55:9:5:4:21:42.86%:31:6.592E-4:51:12:11:1:21 0/1:45:15:8:7:35:42.86%:53:4.1835E-6:41:19:15:4:36 0/1:49:14:4:10:29:48.28%:51:7.6466E-6:46:15:10:5:29 0/1:37:9:5:4:25:36%:30:8.1542E-4:45:16:7:9:25 0/0:38:1:1:0:39:2.56%:62:5E-1:45:38:23:15:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:33 0/0:38:1:1:0:44:2.27%:69:5E-1:43:43:22:21:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:39 0/0:36:5:3:2:14:35.71%:4:2.037E-2:38:9:5:4:15 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/1:40:10:6:4:27:37.04%:34:3.5253E-4:40:17:8:9:29 0/1:40:14:8:6:35:40%:49:1.2005E-5:38:21:14:7:35 0/1:36:12:6:6:30:37.5%:41:6.8751E-5:40:20:10:10:32 0/1:50:15:5:10:32:45.45%:54:3.8647E-6:42:18:14:4:34 0/1:52:8:4:4:31:25.81%:26:2.3332E-3:38:23:16:7:31 0/1:44:25:16:9:54:46.3%:91:7.7765E-10:40:29:14:15:54 0/1:37:16:5:11:43:34.78%:55:3.1446E-6:42:30:19:11:47 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/1:45:11:7:4:25:44%:39:1.1933E-4:41:14:10:4:25 0/1:44:15:9:6:37:40.54%:52:5.1339E-6:39:22:16:6:39 0/1:41:10:6:4:24:41.67%:35:2.9985E-4:39:14:8:6:24 0/1:46:20:10:10:45:44.44%:72:6.2178E-8:41:25:13:12:49 0/1:43:11:8:3:42:26.19%:36:2.2563E-4:36:30:15:15:42 0/1:40:7:3:4:34:20.59%:22:5.5492E-3:37:27:14:13:39 0/0:38:6:5:1:48:12.5%:41:1.3237E-2:40:42:26:16:49 0/1:43:12:7:5:45:26.09%:39:1.0724E-4:38:34:20:14:48 0/0:35:2:0:2:34:5.88%:43:2.4627E-1:38:32:24:8:34 0/1:43:17:8:9:46:36.96%:59:1.2413E-6:40:29:12:17:48 0/1:41:11:5:6:32:34.38%:37:1.7351E-4:40:21:15:6:33 0/1:46:8:2:6:31:25.81%:26:2.3332E-3:38:23:13:10:32 0/1:39:10:6:4:31:31.25%:33:4.259E-4:37:22:13:9:34 0/0:47:6:4:2:27:22.22%:13:1.1309E-2:38:20:14:6:28 0/1:42:8:2:6:39:20.51%:25:2.624E-3:37:31:21:10:40 0/1:48:8:3:5:34:22.86%:26:2.4931E-3:41:27:19:8:35 0/1:49:10:5:5:32:31.25%:33:4.259E-4:37:22:12:10:32 0/1:45:7:2:5:41:17.07%:22:5.9136E-3:40:34:19:15:42 0/1:53:13:9:4:32:40.62%:45:2.6443E-5:44:19:14:5:33 0/1:50:10:3:7:21:47.62%:36:2.3971E-4:44:11:8:3:21 0/1:45:7:3:4:25:28%:23:4.8126E-3:38:18:14:4:25 0/1:47:11:5:6:33:33.33%:37:1.8019E-4:39:22:12:10:33 0/1:44:9:4:5:22:40.91%:31:7.0165E-4:39:13:6:7:22 0/1:47:8:2:6:15:53.33%:29:1.0995E-3:48:7:3:4:15 0/1:51:13:4:9:35:37.14%:45:2.9583E-5:42:21:10:11:35 0/1:43:17:12:5:35:47.22%:62:5.7598E-7:43:18:10:8:38 0/1:41:12:6:6:45:26.09%:39:1.0724E-4:41:34:17:17:48 0/0:45:6:1:5:38:15.79%:28:1.2628E-2:43:32:21:11:38 MTB_anc 2074570 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|intergenic_region|MODIFIER|Rv1829_Rv1829-Rv1830_Rv1830|gene1865-gene1866|intergenic_region|gene1865-gene1866|||n.2074570G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:33 0/0:37:1:1:0:21:4.76%:31:5E-1:47:20:7:13:21 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:16:0%:29:1E0:46:16:9:7:17 0/0:34:1:0:1:27:3.7%:41:5E-1:41:26:13:13:27 0/0:30:1:0:1:16:6.25%:21:5E-1:50:15:8:7:16 0/0:0:0:0:0:26:0%:47:1E0:48:26:18:8:26 0/0:0:0:0:0:17:0%:33:1E0:45:17:4:13:17 0/0:0:0:0:0:21:0%:40:1E0:47:21:6:15:21 0/0:0:0:0:0:23:0%:44:1E0:51:23:15:8:23 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:38:1:1:0:10:10%:11:5E-1:43:9:5:4:11 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:38:1:0:1:27:3.7%:41:5E-1:45:26:10:16:28 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:21:0%:40:1E0:45:21:6:15:21 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:23 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:9:19:28 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:13:0%:25:1E0:47:13:6:7:13 0/0:0:0:0:0:23:0%:44:1E0:45:23:7:16:23 0/0:36:6:5:1:20:30%:7:1.0098E-2:40:14:7:7:20 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:44 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:32:0%:59:1E0:48:32:12:20:32 0/0:34:1:0:1:23:4.35%:34:5E-1:42:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:32 0/0:0:0:0:0:53:0%:99:1E0:48:53:23:30:53 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:18:0%:32:1E0:43:18:6:12:18 0/0:37:1:1:0:24:4.17%:34:5E-1:45:23:15:8:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:18:0%:32:1E0:49:18:13:5:18 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:46 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:15 0/0:0:0:0:0:26:0%:47:1E0:44:26:8:18:26 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:41 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:21 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:15:0%:29:1E0:44:15:5:10:15 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:25 0/0:0:0:0:0:29:0%:55:1E0:50:29:20:9:30 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:44 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:15 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:46 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:16 0/0:60:1:1:0:18:5.56%:24:5E-1:41:17:5:12:18 0/0:0:0:0:0:29:0%:55:1E0:50:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:50:30:13:17:30 0/0:0:0:0:0:14:0%:25:1E0:50:14:10:4:14 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:15:0%:29:1E0:44:15:6:9:15 0/0:37:5:1:4:36:13.89%:29:2.6944E-2:40:31:13:18:36 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:29 0/0:0:0:0:0:19:0%:37:1E0:41:19:4:15:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:36 0/0:36:2:1:1:31:6.45%:40:2.459E-1:44:29:14:15:31 0/0:0:0:0:0:54:0%:99:1E0:44:54:17:37:54 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:38:1:1:0:25:4%:38:5E-1:48:24:11:13:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:37:6:4:2:23:26.09%:11:1.0777E-2:47:17:7:10:23 0/0:31:1:0:1:30:3.45%:45:5E-1:45:28:17:11:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:19 0/0:38:1:0:1:38:2.63%:58:5E-1:43:37:16:21:39 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:23 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:18 0/0:0:0:0:0:18:0%:32:1E0:46:18:13:5:18 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:18:0%:32:1E0:45:18:6:12:18 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:29 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:36:0%:66:1E0:48:36:22:14:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:17 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:45 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:37 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:37 0/0:0:0:0:0:13:0%:25:1E0:45:13:6:7:13 0/0:34:1:1:0:31:3.23%:48:5E-1:42:30:15:15:35 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:42 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:24 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:6:17:23 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:21 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:19 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:26 0/0:34:2:2:0:29:6.9%:37:2.4561E-1:44:27:12:15:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/1:35:9:6:3:33:27.27%:29:1.042E-3:42:24:8:16:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:14:0%:25:1E0:43:14:3:11:14 0/0:0:0:0:0:26:0%:47:1E0:48:26:8:18:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:38:0%:70:1E0:38:38:19:19:40 0/0:39:5:2:3:27:18.52%:19:2.5527E-2:39:22:9:13:27 MTB_anc 2077218 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|gcvB_Rv1832|gene1868|transcript|Transcript_gene1868|Coding|1/1|c.1342G>A|p.Ala448Thr|1342/2826|1342/2826|448/941||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2077218G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2077218G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:53:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:43:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:48:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:52:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:48:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:50:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:54:30:24:55:100%:99:4.0229E-32:0:0:0:0:56 1/1:45:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:69:32:37:69:100%:99:4.233E-41:0:0:0:0:70 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:62:24:38:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:38:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:58 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 2082436 . C T . PASS AC=42;AF=0.140;AN=300;ANN=T|missense_variant|MODERATE|Rv1835c_Rv1835c|gene1871|transcript|Transcript_gene1871|Coding|1/1|c.152G>A|p.Gly51Asp|152/1887|152/1887|51/628||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2082436C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2082436C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:1:0:46:2.17%:73:5E-1:48:45:24:21:48 0/0:0:0:0:0:19:0%:37:1E0:49:19:6:13:19 0/0:0:0:0:0:51:0%:97:1E0:45:51:30:21:52 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:22 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:22 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:52:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:44 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:20 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:19:0%:37:1E0:51:19:10:9:20 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:29 0/0:0:0:0:0:25:0%:48:1E0:50:25:15:10:25 0/0:39:1:0:1:25:4%:38:5E-1:45:24:12:12:25 0/0:0:0:0:0:32:0%:59:1E0:41:31:11:20:33 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:37 0/0:0:0:0:0:61:0%:99:1E0:45:61:34:27:65 0/0:60:1:1:0:33:3.03%:52:5E-1:43:32:14:18:34 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:33 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:33:0%:59:1E0:43:32:11:21:33 0/0:0:0:0:0:36:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:29 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:55 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:18 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:38 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:55 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:42 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:49:0%:93:1E0:44:49:22:27:51 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:22 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:39:0%:74:1E0:50:39:21:18:39 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:8:21:31 0/0:0:0:0:0:33:0%:63:1E0:51:33:13:20:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:35 1/1:43:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:37:0%:70:1E0:50:37:19:18:39 0/0:35:1:0:1:32:3.12%:48:5E-1:41:31:13:18:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:22:0%:40:1E0:46:22:16:6:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:20:0%:36:1E0:46:20:16:4:20 0/0:0:0:0:0:53:0%:99:1E0:43:53:32:21:54 0/0:0:0:0:0:35:0%:67:1E0:44:35:12:23:36 0/0:0:0:0:0:49:0%:93:1E0:42:49:16:33:49 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:23 0/0:0:0:0:0:50:0%:92:1E0:44:50:20:30:51 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:33 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:37 0/0:0:0:0:0:10:0%:17:1E0:47:10:8:2:13 0/0:30:1:1:0:25:4%:38:5E-1:44:24:11:13:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:10:19:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:25 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:46 0/0:0:0:0:0:46:0%:85:1E0:38:46:19:27:47 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:48 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:29 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:24:0%:44:1E0:41:24:17:7:28 0/0:0:0:0:0:59:0%:99:1E0:43:59:36:23:61 0/0:0:0:0:0:55:0%:99:1E0:42:55:25:30:58 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:25 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:51:0%:97:1E0:41:51:20:31:53 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:39 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:51 0/0:0:0:0:0:51:0%:97:1E0:39:51:22:29:54 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:30 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:48 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:46:0%:85:1E0:40:46:18:28:48 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:47:0%:89:1E0:40:47:22:25:48 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:50:0%:92:1E0:38:50:21:29:51 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:35 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:43 0/0:0:0:0:0:58:0%:99:1E0:40:58:30:28:58 0/0:32:1:0:1:45:2.22%:73:5E-1:44:44:25:19:45 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:32 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:48:0%:89:1E0:40:48:27:21:48 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 MTB_anc 2082951 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv1836c_Rv1836c|gene1872|transcript|Transcript_gene1872|Coding|1/1|c.1686G>A|p.Ala562Ala|1686/2034|1686/2034|562/677||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2082951C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2082951C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:46 0/0:0:0:0:0:13:0%:25:1E0:47:13:8:5:14 0/0:0:0:0:0:54:0%:99:1E0:43:54:19:35:55 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:25 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:12:25:38 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:23 0/0:0:0:0:0:42:0%:77:1E0:41:42:29:13:44 0/0:0:0:0:0:15:0%:29:1E0:51:15:13:2:16 0/0:0:0:0:0:55:0%:99:1E0:41:55:32:23:58 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:28:0%:51:1E0:36:28:14:14:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:33 0/0:0:0:0:0:44:0%:81:1E0:41:44:15:29:46 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:48 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:40 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:10:21:31 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:33 0/0:0:0:0:0:58:0%:99:1E0:47:58:32:26:59 0/0:0:0:0:0:47:0%:89:1E0:45:47:26:21:48 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:0:0:0:0:48:0%:89:1E0:43:48:28:20:48 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:53:0%:99:1E0:42:53:28:25:54 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:22 0/0:0:0:0:0:56:0%:99:1E0:42:56:32:24:56 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:58:0%:99:1E0:41:58:28:30:62 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:38 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:52:0%:96:1E0:41:52:23:29:52 0/0:0:0:0:0:39:0%:74:1E0:48:39:24:15:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:7:21:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:39 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:37 0/0:0:0:0:0:65:0%:99:1E0:43:65:37:28:65 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:32 0/0:0:0:0:0:53:0%:99:1E0:44:53:23:30:55 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:21 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:36:0%:66:1E0:47:36:13:23:36 0/0:0:0:0:0:19:0%:37:1E0:47:19:13:6:19 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:58:0%:99:1E0:40:58:32:26:59 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:31 0/0:0:0:0:0:50:0%:92:1E0:39:50:27:23:53 0/0:0:0:0:0:43:0%:82:1E0:39:43:17:26:43 1/1:46:33:17:16:36:91.67%:99:2.0653E-17:36:3:0:3:37 0/0:0:0:0:0:30:0%:55:1E0:37:30:19:11:34 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:44:0%:81:1E0:40:44:28:16:45 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:14:0%:25:1E0:40:14:9:5:14 0/0:0:0:0:0:28:0%:51:1E0:41:28:8:20:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:9:20:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:20 0/0:0:0:0:0:17:0%:33:1E0:44:17:14:3:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:34 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:21 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:23 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:37 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:33 0/0:0:0:0:0:40:0%:74:1E0:37:40:22:18:43 0/0:0:0:0:0:24:0%:44:1E0:36:24:16:8:25 0/0:0:0:0:0:31:0%:59:1E0:47:31:22:9:33 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:55:0%:99:1E0:38:55:20:35:58 0/0:0:0:0:0:49:0%:93:1E0:39:49:15:34:50 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:22:8:31 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:48 0/0:0:0:0:0:44:0%:81:1E0:38:44:30:14:45 0/0:0:0:0:0:40:0%:74:1E0:38:40:23:17:42 0/0:0:0:0:0:24:0%:44:1E0:37:24:18:6:25 0/0:0:0:0:0:37:0%:70:1E0:38:37:25:12:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:39 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:34 0/0:0:0:0:0:30:0%:55:1E0:36:30:16:14:31 0/0:0:0:0:0:27:0%:52:1E0:38:27:20:7:33 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:33 0/0:0:0:0:0:31:0%:59:1E0:38:31:25:6:31 0/0:0:0:0:0:29:0%:55:1E0:37:29:20:9:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:25 0/0:0:0:0:0:47:0%:89:1E0:37:47:30:17:49 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:48 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:34 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:40 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:44 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:49:0%:93:1E0:40:49:28:21:49 0/0:39:1:1:0:38:2.63%:58:5E-1:41:37:25:12:42 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:32 MTB_anc 2093715 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|guaB1_Rv1843c-gnd1_Rv1844c|gene1879-gene1880|intergenic_region|gene1879-gene1880|||n.2093715C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:58:24:34:59:98.31%:99:2.4634E-33:39:1:1:0:59 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:52:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:51:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:52:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:50:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:34:15:19:35:97.14%:99:3.2089E-19:38:1:1:0:35 1/1:39:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:60:37:23:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:47:16:31:48:97.92%:99:7.6145E-27:33:1:0:1:50 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:26:14:12:27:96.3%:99:1.4382E-14:38:1:0:1:27 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:58 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:41:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:47 1/1:43:61:30:31:62:98.39%:99:2.609E-36:0:0:0:0:64 1/1:37:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:47 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:63:28:35:63:100%:99:1.657E-37:0:0:0:0:64 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:40 MTB_anc 2094911 . ACAGCGT A . PASS AC=269;AF=0.897;AN=300;ANN=A|disruptive_inframe_deletion|MODERATE|gnd1_Rv1844c|gene1880|transcript|Transcript_gene1880|Coding|1/1|c.272_277delACGCTG|p.Asp91_Ala92del|277/1458|272/1458|91/485||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2094912_2094917delCAGCGT||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2094912_2094917delCAGCGT||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:40:17:23:42:95.24%:99:5.6346E-22:35:2:0:2:42 0/1:47:22:6:16:25:88%:99:2.5916E-11:43:3:1:2:25 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:28:10:18:29:93.33%:99:4.194E-15:36:2:0:2:30 1/1:39:32:12:20:35:91.43%:99:7.5196E-17:39:3:1:2:35 0/1:46:18:7:11:21:85.71%:84:3.7603E-9:35:3:2:1:21 1/1:44:31:12:19:32:96.88%:99:1.8007E-17:33:1:0:1:32 0/1:42:23:9:14:26:88.46%:99:7.3681E-12:44:3:1:2:26 1/1:47:28:14:14:30:90.32%:99:1.2857E-14:34:3:1:2:31 1/1:48:40:11:29:42:95.24%:99:5.6346E-22:47:2:0:2:42 1/1:48:25:11:14:26:96.15%:99:5.4444E-14:38:1:0:1:26 1/1:43:37:11:26:40:92.5%:99:1.1479E-19:33:3:1:2:40 0/1:44:17:5:12:20:85%:78:1.2848E-8:52:3:1:2:20 1/1:41:42:17:25:42:95.45%:99:3.9431E-23:34:2:1:1:44 1/1:45:30:10:20:33:90.91%:99:9.89E-16:36:3:1:2:33 1/1:45:39:17:22:42:92.86%:99:8.4519E-21:35:3:1:2:42 1/1:44:29:12:17:29:96.67%:99:2.6212E-16:38:1:0:1:30 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/1:45:35:14:21:41:85.37%:99:2.5278E-17:43:6:4:2:41 1/1:41:39:16:23:41:92.86%:99:8.4519E-21:44:3:1:2:42 1/1:44:38:14:24:40:95%:99:8.0088E-21:35:2:1:1:40 1/1:45:37:14:23:39:94.87%:99:3.0128E-20:46:2:1:1:39 1/1:43:35:16:19:37:94.59%:99:4.2437E-19:36:2:1:1:37 1/1:43:35:15:20:38:92.11%:99:1.5466E-18:41:3:1:2:38 0/1:45:18:7:11:21:85.71%:84:3.7603E-9:36:3:0:3:21 1/1:45:22:5:17:24:91.67%:99:1.0078E-11:33:2:2:0:24 0/1:46:15:8:7:18:83.33%:68:1.4655E-7:43:3:2:1:18 1/1:43:27:11:16:30:90%:99:4.6134E-14:34:3:1:2:30 0/1:41:26:8:18:29:89.66%:99:1.6496E-13:36:3:0:3:29 1/1:42:26:7:19:27:96.3%:99:1.4382E-14:34:1:1:0:27 1/1:42:18:7:11:19:94.74%:92:5.6585E-10:34:1:1:0:19 1/1:43:31:9:22:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:40:25:10:15:26:96.15%:99:5.4444E-14:38:1:1:0:26 1/1:46:28:11:17:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:40:28:13:15:30:93.33%:99:4.194E-15:34:2:0:2:30 0/1:43:30:7:23:37:83.33%:99:1.1855E-14:35:6:2:4:37 0/1:45:53:21:32:60:88.33%:99:9.0012E-27:34:7:4:3:60 1/1:43:44:19:25:44:95.65%:99:2.7459E-24:33:2:1:1:46 1/1:40:41:11:30:45:91.11%:99:2.0407E-21:35:4:2:2:45 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:44:21:23:45:97.78%:99:4.4304E-25:38:1:0:1:45 0/1:42:24:10:14:30:80%:99:1.647E-11:42:6:2:4:30 1/1:44:19:8:11:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:39:38:15:23:42:90.48%:99:9.7197E-20:47:4:2:2:42 0/1:43:28:12:16:32:84.85%:99:6.9527E-14:35:5:0:5:33 0/1:46:31:16:15:35:88.57%:99:7.3316E-16:34:4:1:3:35 1/1:41:38:14:24:39:97.44%:99:1.4697E-21:38:1:0:1:39 1/1:42:34:13:21:35:97.14%:99:3.2089E-19:34:1:0:1:36 1/1:43:42:18:24:43:97.67%:99:6.6289E-24:38:1:0:1:43 1/1:43:21:12:9:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:40:36:15:21:37:92.31%:99:4.2179E-19:35:3:3:0:39 1/1:43:26:13:13:26:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:44:44:13:31:46:95.65%:99:2.7459E-24:49:2:2:0:46 1/1:42:38:10:28:40:95%:99:8.0088E-21:35:2:1:1:40 1/1:42:46:21:25:49:93.88%:99:8.6743E-25:36:3:1:2:49 1/1:41:38:14:24:41:92.68%:99:3.1178E-20:35:3:2:1:41 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:40:17:23:42:95.24%:99:5.6346E-22:35:2:1:1:42 1/1:46:36:18:18:38:94.74%:99:1.1316E-19:34:2:2:0:38 0/1:40:30:13:17:32:88.24%:99:2.5943E-15:33:4:2:2:34 1/1:41:38:13:25:41:92.68%:99:3.1178E-20:35:3:1:2:41 1/1:41:47:23:24:50:90.38%:99:2.6449E-24:33:5:2:3:52 1/1:45:27:12:15:30:90%:99:4.6134E-14:35:3:1:2:30 1/1:44:25:9:16:27:92.59%:99:2.0853E-13:38:2:0:2:27 1/1:40:49:16:33:53:92.45%:99:6.2975E-26:35:4:2:2:53 0/1:44:24:9:15:27:88.89%:99:2.0853E-12:33:3:1:2:27 0/1:44:35:17:18:39:89.74%:99:4.5343E-18:32:4:1:3:39 1/1:47:15:6:9:16:93.75%:75:2.8282E-8:32:1:0:1:16 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:13:15:30:90.32%:99:1.2857E-14:40:3:1:2:31 1/1:48:29:14:15:31:93.55%:99:1.1344E-15:46:2:0:2:31 1/1:45:27:14:13:28:93.1%:99:1.5465E-14:36:2:0:2:29 0/1:50:27:10:17:34:79.41%:99:7.9014E-13:49:7:2:5:34 1/1:40:42:18:24:46:91.3%:99:5.6062E-22:35:4:1:3:46 0/1:43:25:11:14:28:89.29%:99:5.8768E-13:35:3:1:2:28 0/1:39:32:7:25:34:88.89%:99:2.0653E-16:40:4:1:3:36 0/1:45:30:12:18:36:83.33%:99:1.1855E-14:43:6:4:2:36 1/1:45:29:14:15:31:93.55%:99:1.1344E-15:33:2:1:1:31 1/1:43:28:10:18:30:93.33%:99:4.194E-15:35:2:0:2:30 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:42:15:27:43:97.67%:99:6.6289E-24:34:1:0:1:43 1/1:43:30:14:16:32:90.91%:99:9.89E-16:34:3:2:1:33 0/1:46:26:7:19:31:83.87%:99:8.0999E-13:39:5:2:3:31 0/1:41:31:9:22:35:88.57%:99:7.3316E-16:37:4:1:3:35 1/1:40:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/1:41:15:3:12:17:88.24%:71:7.3277E-8:46:2:0:2:17 1/1:45:36:19:17:37:97.3%:99:2.1762E-20:36:1:0:1:37 1/1:44:30:8:22:32:93.75%:99:3.0612E-16:34:2:0:2:32 0/1:45:31:13:18:36:86.11%:99:1.6935E-15:35:5:2:3:36 0/1:47:24:8:16:28:85.71%:99:4.7015E-12:34:4:3:1:28 1/1:41:42:13:29:45:91.3%:99:5.6062E-22:34:4:0:4:46 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:37:22:15:40:92.5%:99:1.1479E-19:36:3:0:3:40 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:29:9:20:30:93.55%:99:1.1344E-15:35:2:0:2:31 1/1:41:28:9:19:29:96.55%:99:9.9776E-16:35:1:0:1:29 0/1:40:30:12:18:34:88.24%:99:2.5943E-15:35:4:2:2:34 1/1:41:31:10:21:34:91.18%:99:2.7308E-16:36:3:1:2:34 1/1:43:26:13:13:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:45:37:16:21:38:94.87%:99:3.0128E-20:60:2:1:1:39 1/1:40:34:15:19:33:97.14%:99:3.2089E-19:32:1:1:0:35 1/1:42:32:13:19:34:91.43%:99:7.5196E-17:37:3:0:3:35 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:28:10:18:30:93.33%:99:4.194E-15:32:2:0:2:30 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:12:18:32:90.91%:99:9.89E-16:43:3:0:3:33 1/1:42:38:12:26:40:95%:99:8.0088E-21:35:2:2:0:40 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:12:15:28:96.43%:99:3.7915E-15:35:1:0:1:28 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:6:21:28:93.1%:99:1.5465E-14:32:2:0:2:29 0/1:42:35:7:28:39:89.74%:99:4.5343E-18:34:4:2:2:39 1/1:38:34:11:23:34:94.44%:99:1.5887E-18:35:2:0:2:36 1/1:39:40:13:27:41:95.24%:99:5.6346E-22:33:2:1:1:42 1/1:37:29:9:20:31:93.55%:99:1.1344E-15:34:2:1:1:31 1/1:41:33:13:20:34:94.29%:99:5.9366E-18:35:2:2:0:35 0/1:37:23:5:18:25:88.46%:99:7.3681E-12:35:3:0:3:26 1/1:40:52:19:33:54:96.3%:99:6.1952E-29:35:2:1:1:55 1/1:40:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:24:11:13:25:96%:99:2.0568E-13:33:1:1:0:25 1/1:42:38:12:26:40:92.68%:99:3.1178E-20:33:3:1:2:41 1/1:39:62:17:45:63:98.41%:99:1.0605E-35:33:1:0:1:63 1/1:39:41:13:28:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:36:9:27:39:92.31%:99:4.2179E-19:34:3:1:2:39 0/1:43:38:15:23:43:88.37%:99:2.5797E-19:30:5:0:5:44 1/1:40:33:12:21:36:91.67%:99:2.0653E-17:33:3:1:2:37 1/1:39:40:14:26:42:95.24%:99:5.6346E-22:35:2:1:1:42 1/1:40:26:8:18:28:92.86%:99:5.6872E-14:34:2:0:2:29 1/1:40:38:13:25:39:97.44%:99:1.4697E-21:35:1:0:1:40 1/1:39:46:23:23:48:92%:99:3.1346E-24:35:4:0:4:50 1/1:38:37:17:20:36:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:39:43:16:27:45:91.49%:99:1.5372E-22:32:4:1:3:47 1/1:37:36:17:19:36:94.74%:99:1.1316E-19:32:2:0:2:38 1/1:41:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:46:25:21:47:97.87%:99:2.9526E-26:33:1:0:1:47 1/1:40:42:13:29:43:97.67%:99:6.6289E-24:34:1:0:1:43 0/1:43:40:18:22:45:86.96%:99:4.9559E-20:37:6:3:3:46 1/1:40:43:17:26:45:95.56%:99:1.0412E-23:35:2:2:0:45 1/1:42:38:16:22:39:97.44%:99:1.4697E-21:32:1:1:0:40 1/1:42:21:6:15:22:95.45%:99:1.0931E-11:37:1:1:0:22 1/1:41:44:17:27:47:91.67%:99:4.207E-23:35:4:1:3:48 1/1:42:32:16:16:34:91.43%:99:7.5196E-17:33:3:1:2:35 0/1:40:44:10:34:49:89.8%:99:1.2413E-22:34:5:4:1:49 1/1:45:24:9:15:26:92.31%:99:7.6222E-13:37:2:0:2:26 1/1:42:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:40:15:25:42:95.24%:99:5.6346E-22:33:2:1:1:42 1/1:39:43:19:24:45:95.56%:99:1.0412E-23:49:2:0:2:45 1/1:43:33:10:23:34:97.06%:99:1.2301E-18:34:1:0:1:34 MTB_anc 2097144 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1847_Rv1847|gene1883|transcript|Transcript_gene1883|Coding|1/1|c.268C>G|p.Leu90Val|268/423|268/423|90/140||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2097144C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2097144C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:35:22:13:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:61:33:28:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:36:13:23:37:97.3%:99:2.1762E-20:60:1:1:0:39 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:10:26:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:44:17:27:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:57:35:22:58:98.28%:99:6.4572E-34:0:0:0:0:58 1/1:45:20:7:13:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:43:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:30:14:16:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:39:20:19:40:97.5%:99:3.6742E-23:0:0:0:0:43 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:41:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:63:29:34:63:100%:99:1.657E-37:0:0:0:0:63 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 2101967 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|ndh_Rv1854c|gene1890|transcript|Transcript_gene1890|Coding|1/1|c.1076G>A|p.Arg359His|1076/1392|1076/1392|359/463||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2101967C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2101967C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|isoniazid_ethionamide_prothionamide_clofazimine_thioridazine|||n.2101967C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:46:48:27:21:48 0/0:0:0:0:0:18:0%:32:1E0:50:18:11:7:18 0/0:0:0:0:0:65:0%:99:1E0:47:65:34:31:65 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:20 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:46:0%:85:1E0:46:46:22:24:46 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:31 0/0:0:0:0:0:24:0%:44:1E0:50:24:14:10:24 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:48 0/0:0:0:0:0:29:0%:55:1E0:51:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:28:0%:51:1E0:52:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:54:0%:99:1E0:46:54:25:29:55 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:31 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:0:0:0:0:33:0%:63:1E0:52:33:14:19:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:57:0%:99:1E0:48:57:25:32:57 0/0:0:0:0:0:55:0%:99:1E0:43:55:29:26:55 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:49 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:46:0%:85:1E0:46:46:22:24:46 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:45:0%:85:1E0:49:45:21:24:46 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:19 0/0:0:0:0:0:51:0%:97:1E0:45:51:22:29:53 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:35 0/0:0:0:0:0:17:0%:33:1E0:52:17:7:10:17 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:50 0/0:0:0:0:0:23:0%:44:1E0:48:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:44 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:43 0/0:0:0:0:0:45:0%:85:1E0:47:45:25:20:45 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:18 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:48:0%:89:1E0:43:48:21:27:48 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:66:0%:99:1E0:45:66:39:27:67 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:44 0/0:0:0:0:0:18:0%:32:1E0:51:18:7:11:18 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:25 0/0:0:0:0:0:18:0%:32:1E0:54:18:12:6:18 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 1/1:43:52:27:25:55:94.55%:99:3.1317E-28:38:3:2:1:57 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:60:1:1:0:32:3.12%:48:5E-1:43:31:11:20:32 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:33:0%:63:1E0:51:33:15:18:33 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:23:0%:44:1E0:52:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:57:0%:99:1E0:44:57:32:25:57 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:27:15:42 0/0:20:1:1:0:35:2.86%:55:5E-1:44:34:16:18:36 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:42 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:60:1:0:1:46:2.17%:73:5E-1:45:45:24:21:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:15:0%:29:1E0:46:15:10:5:16 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:35 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:41:0%:78:1E0:46:41:18:23:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:20:6:26 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:49:0%:93:1E0:44:49:22:27:50 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:42 0/0:0:0:0:0:22:0%:40:1E0:44:22:6:16:22 0/0:0:0:0:0:55:0%:99:1E0:41:55:17:38:56 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:38 0/0:0:0:0:0:55:0%:99:1E0:41:55:23:32:57 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:47 0/0:0:0:0:0:49:0%:93:1E0:40:49:21:28:51 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:49:0%:93:1E0:40:49:12:37:49 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:45 0/0:0:0:0:0:38:0%:70:1E0:40:38:14:24:38 0/0:0:0:0:0:44:0%:81:1E0:45:44:14:30:45 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:55:0%:99:1E0:40:55:25:30:56 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:37 0/0:0:0:0:0:49:0%:93:1E0:40:49:24:25:50 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:52:0%:96:1E0:42:52:19:33:52 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:47:0%:89:1E0:45:47:28:19:47 0/0:0:0:0:0:52:0%:96:1E0:43:52:30:22:52 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:30 MTB_anc 2108890 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|apa_Rv1860-Rv1861_Rv1861|gene1896-gene1897|intergenic_region|gene1896-gene1897|||n.2108890C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:56:30:26:57:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:42:19:23:43:97.67%:99:6.6289E-24:46:1:1:0:43 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:53:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 2109108 . GTATACCGA G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|intergenic_region|MODIFIER|apa_Rv1860-Rv1861_Rv1861|gene1896-gene1897|intergenic_region|gene1896-gene1897|||n.2109109_2109116delTATACCGA||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:24 0/0:0:0:0:0:48:0%:89:1E0:47:48:19:29:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:4:20:24 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:18 0/0:0:0:0:0:29:0%:55:1E0:53:29:16:13:30 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:40:0%:74:1E0:50:40:20:20:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:29:0%:55:1E0:52:29:12:17:29 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:43 0/0:0:0:0:0:25:0%:48:1E0:48:25:8:17:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:10:20:30 0/0:0:0:0:0:12:0%:21:1E0:44:12:5:7:12 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:38:1:0:1:23:4.35%:34:5E-1:43:22:10:12:23 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:38:1:0:1:42:2.38%:66:5E-1:44:41:17:24:43 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:29 0/0:0:0:0:0:32:0%:59:1E0:50:32:18:14:32 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:19 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:41 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:48:28:8:20:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:63:0%:99:1E0:46:63:30:33:63 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:7:18:25 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:15 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:35 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:35:0%:67:1E0:50:35:11:24:35 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:9:22:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:51:27:14:13:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:39 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:23 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:60:0%:99:1E0:46:60:21:39:62 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:32:0%:59:1E0:49:32:10:22:32 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:48:27:9:18:27 0/0:0:0:0:0:19:0%:37:1E0:52:19:10:9:19 0/0:0:0:0:0:36:0%:66:1E0:51:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:19:0%:37:1E0:42:19:13:6:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:39:0%:74:1E0:48:39:14:25:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:34 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:26 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:21 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:24 0/0:0:0:0:0:39:0%:74:1E0:47:39:14:25:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:31 0/0:60:1:0:1:26:3.85%:38:5E-1:49:25:14:11:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:39:0%:74:1E0:48:39:15:24:40 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:17 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:36 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:16 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:22 0/1:42:26:13:13:28:89.66%:99:5.6872E-14:35:2:2:0:28 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:37 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:19 0/0:0:0:0:0:27:0%:52:1E0:43:27:7:20:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:34 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:18 0/0:0:0:0:0:65:0%:99:1E0:43:65:31:34:68 0/0:0:0:0:0:56:0%:99:1E0:43:56:23:33:59 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:19 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:44 0/0:0:0:0:0:14:0%:25:1E0:39:14:5:9:15 0/0:0:0:0:0:43:0%:82:1E0:40:43:17:26:44 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:37 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:38 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:53:0%:99:1E0:39:53:26:27:54 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:60:1:0:1:33:3.03%:48:5E-1:46:31:12:19:33 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:45:0%:85:1E0:46:45:21:24:46 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:14:0%:25:1E0:44:14:5:9:15 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:15:29:44 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 MTB_anc 2109523 . C CG . PASS AC=294;AF=0.980;AN=300;ANN=CG|intergenic_region|MODIFIER|Rv1861_Rv1861-adhA_Rv1862|gene1897-gene1898|intergenic_region|gene1897-gene1898|||n.2109523_2109524insG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:18:6:12:19:94.74%:92:5.6585E-10:34:1:1:0:19 1/1:41:52:15:37:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:20:10:10:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:24:7:17:25:92.31%:99:7.6222E-13:33:2:1:1:26 1/1:42:36:14:22:37:97.3%:99:2.1762E-20:35:1:0:1:37 1/1:40:21:6:15:20:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 0/1:40:23:9:14:27:85.19%:99:1.6161E-11:31:4:2:2:27 1/1:45:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:21:5:16:22:95.45%:99:1.0931E-11:33:1:0:1:23 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:12:19:31:96.88%:99:2.1486E-18:0:0:0:0:31 1/1:41:17:9:8:17:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:37:17:9:8:18:94.44%:86:2.0936E-9:33:1:0:1:18 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:46:20:26:47:95.83%:99:1.9036E-25:32:2:1:1:48 1/1:47:26:6:20:27:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:41:36:14:22:37:97.3%:99:2.1762E-20:35:1:0:1:37 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:7:15:23:95.65%:99:2.9149E-12:35:1:0:1:23 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:34:16:18:34:97.14%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:15:17:33:96.97%:99:4.7095E-18:36:1:1:0:33 1/1:42:23:10:13:24:95.83%:99:7.7525E-13:34:1:1:0:24 1/1:41:29:16:13:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:42:34:15:19:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:34:15:19:36:94.44%:99:3.2089E-19:34:1:0:1:36 1/1:41:29:14:15:30:93.55%:99:2.6212E-16:33:1:0:1:31 1/1:38:38:19:19:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:50:20:30:51:98.04%:99:1.3013E-28:34:1:0:1:51 1/1:41:48:13:35:49:96%:99:1.3143E-26:34:2:0:2:50 1/1:42:30:13:17:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:40:39:14:25:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:39:30:14:16:31:96.77%:99:6.8754E-17:24:1:1:0:31 1/1:43:32:12:20:35:91.43%:99:7.5196E-17:34:3:1:2:35 1/1:39:30:16:14:32:93.75%:99:6.8754E-17:37:1:0:1:32 1/1:38:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:12:17:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:41:18:23:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:22:10:12:24:91.67%:99:2.9149E-12:32:1:1:0:24 1/1:40:45:20:25:45:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:40:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:38:13:25:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:26:11:15:27:96.3%:99:1.4382E-14:32:1:1:0:27 1/1:38:38:11:27:37:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:8:20:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:45:16:29:45:97.83%:99:1.1441E-25:29:1:0:1:46 1/1:40:34:15:19:36:94.44%:99:1.5887E-18:34:2:0:2:36 1/1:39:27:9:18:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:39:31:12:19:31:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:17:15:33:96.97%:99:4.7095E-18:32:1:1:0:33 1/1:38:35:11:24:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:14:20:34:97.14%:99:3.2089E-19:32:1:0:1:35 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:37:10:27:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:42:11:31:43:95.45%:99:6.6289E-24:34:1:0:1:44 1/1:43:17:9:8:18:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:43:39:14:25:40:95.12%:99:2.1258E-21:32:2:1:1:41 1/1:48:23:10:13:24:95.83%:99:7.7525E-13:32:1:0:1:24 0/1:40:17:11:6:20:85%:82:5.9414E-9:26:2:1:1:20 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:5:17:23:95.65%:99:2.9149E-12:29:1:0:1:24 0/1:42:18:10:8:22:81.82%:81:7.1052E-9:40:4:3:1:22 1/1:44:36:15:21:37:97.3%:99:2.1762E-20:60:1:0:1:37 1/1:37:41:22:19:41:95.35%:99:1.4915E-22:35:2:1:1:43 1/1:39:32:12:20:35:91.43%:99:4.7095E-18:33:1:0:1:35 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:12:21:34:97.06%:99:1.2301E-18:30:1:0:1:34 1/1:39:42:20:22:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:28:10:18:29:93.33%:99:9.9776E-16:33:1:0:1:30 1/1:41:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:38:10:28:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:42:18:24:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:24:10:14:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:21:9:12:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:23:10:13:23:95.83%:99:7.7525E-13:35:1:0:1:24 1/1:42:20:11:9:22:90.91%:99:4.0873E-11:34:1:0:1:22 1/1:37:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:39:14:25:41:95.12%:99:2.1258E-21:34:2:1:1:41 1/1:40:47:20:27:49:95.92%:99:5.0044E-26:33:2:0:2:49 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:27:9:18:28:96.43%:99:3.7915E-15:32:1:1:0:29 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:26:11:15:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:15:4:11:16:93.75%:75:2.8282E-8:32:1:0:1:16 1/1:40:42:19:23:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:33:12:21:33:97.06%:99:1.2301E-18:33:1:1:0:34 1/1:37:28:11:17:29:93.33%:99:4.194E-15:33:2:0:2:30 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:26:8:18:26:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:15:21:37:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:42:35:17:18:36:97.22%:99:8.3613E-20:33:1:0:1:36 0/1:40:25:11:14:28:89.29%:99:5.8768E-13:33:3:1:2:28 1/1:39:18:6:12:17:94.74%:92:5.6585E-10:31:1:0:1:19 1/1:37:19:6:13:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:36:10:26:37:97.3%:99:2.1762E-20:33:1:0:1:37 1/1:38:28:14:14:30:93.33%:99:4.194E-15:32:2:0:2:30 1/1:34:30:12:18:27:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:43:20:23:44:97.73%:99:1.7144E-24:33:1:0:1:44 1/1:39:22:7:15:23:95.65%:99:2.9149E-12:31:1:0:1:23 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:43:13:30:45:95.56%:99:1.0412E-23:33:2:0:2:45 1/1:37:16:8:8:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:20:7:13:18:95.24%:99:4.0873E-11:32:1:0:1:22 1/1:36:44:17:27:45:93.62%:99:1.2056E-23:32:3:0:3:47 1/1:39:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:38:17:21:38:97.44%:99:1.4697E-21:32:1:0:1:39 1/1:36:30:8:22:29:96.77%:99:6.8754E-17:31:1:1:0:31 1/1:39:37:15:22:38:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:38:41:14:27:41:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:40:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:25:9:16:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:34:7:27:36:91.89%:99:5.6582E-18:31:3:1:2:37 1/1:40:30:12:18:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:37:38:17:21:39:95%:99:8.0088E-21:32:2:1:1:41 1/1:40:30:17:13:31:96.77%:99:6.8754E-17:32:1:1:0:31 1/1:38:30:9:21:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:37:58:22:36:59:98.31%:99:2.4634E-33:33:1:0:1:59 0/1:41:26:13:13:29:89.66%:99:5.6872E-14:33:2:0:2:29 1/1:40:28:11:17:29:93.33%:99:9.9776E-16:34:1:0:1:30 1/1:37:34:13:21:35:94.44%:99:1.5887E-18:33:2:1:1:36 0/1:41:20:8:12:23:86.96%:95:3.1579E-10:32:3:0:3:23 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:23:10:13:25:92%:99:2.7767E-12:33:2:0:2:25 1/1:39:39:12:27:37:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:37:17:20:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:22:7:15:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:31:6:25:32:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:42:44:12:32:44:97.78%:99:3.8097E-26:0:0:0:0:44 1/1:37:45:16:29:47:95.74%:99:7.2338E-25:33:2:0:2:47 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 2110365 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|adhA_Rv1862|gene1898|transcript|Transcript_gene1898|Coding|1/1|c.822C>A|p.Thr274Thr|822/1041|822/1041|274/346||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2110365C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2110365C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:49:29:20:49:100%:99:3.925E-29:0:0:0:0:52 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:71:40:31:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:29:13:16:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 2114105 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv1866_Rv1866|gene1902|transcript|Transcript_gene1902|Coding|1/1|c.966G>A|p.Pro322Pro|966/2337|966/2337|322/778||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2114105G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2114105G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:53 0/0:60:1:1:0:15:6.67%:21:5E-1:45:14:7:7:16 0/0:0:0:0:0:48:0%:89:1E0:45:48:17:31:48 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:18:0%:32:1E0:49:18:8:10:18 0/0:38:1:1:0:38:2.63%:58:5E-1:42:37:20:17:38 0/0:0:0:0:0:16:0%:29:1E0:48:16:11:5:16 0/0:0:0:0:0:53:0%:99:1E0:44:53:32:21:55 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:19 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/1:39:21:10:11:31:67.74%:86:2.4087E-9:43:10:7:3:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:20:10:31 0/0:0:0:0:0:50:0%:92:1E0:40:50:23:27:50 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:15 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:32 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:29 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:53:0%:99:1E0:43:53:30:23:53 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:39 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:44 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:22:10:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:34 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:50:0%:92:1E0:41:50:32:18:50 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:38 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:52:0%:96:1E0:44:52:26:26:53 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:40:0%:74:1E0:41:40:26:14:40 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:13:0%:25:1E0:48:13:4:9:13 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:34 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:28:0%:51:1E0:46:28:19:9:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:41 0/0:0:0:0:0:42:0%:77:1E0:43:42:15:27:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:60:1:1:0:30:3.33%:44:5E-1:41:29:17:12:31 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:50 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:38:1:1:0:30:3.33%:44:5E-1:46:29:12:17:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:25 0/0:0:0:0:0:14:0%:25:1E0:46:14:8:6:14 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:15:7:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:22 0/0:0:0:0:0:18:0%:32:1E0:38:18:13:5:18 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:34 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:40 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:30 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:19 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:39 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:23 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:51:0%:97:1E0:40:51:30:21:53 0/0:0:0:0:0:45:0%:85:1E0:40:45:28:17:45 0/0:0:0:0:0:22:0%:40:1E0:36:22:12:10:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:24 0/0:0:0:0:0:46:0%:85:1E0:37:46:31:15:48 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:33 0/0:0:0:0:0:40:0%:74:1E0:37:40:20:20:40 0/0:0:0:0:0:40:0%:74:1E0:37:40:22:18:44 0/0:0:0:0:0:33:0%:63:1E0:37:33:25:8:33 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 0/0:0:0:0:0:38:0%:70:1E0:37:38:24:14:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:22:12:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:31 0/0:0:0:0:0:24:0%:44:1E0:38:24:15:9:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:39:1:1:0:66:1.52%:99:5E-1:38:65:31:34:68 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:32 0/0:60:1:1:0:28:3.57%:41:5E-1:41:27:17:10:29 0/0:33:1:1:0:38:2.63%:58:5E-1:43:37:18:19:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:20:0%:36:1E0:42:20:7:13:20 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:40 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:19 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:48 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:46 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:24 MTB_anc 2114797 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv1866_Rv1866|gene1902|transcript|Transcript_gene1902|Coding|1/1|c.1658T>G|p.Leu553Arg|1658/2337|1658/2337|553/778||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2114797T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2114797T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:53:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:50:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:49:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:44:19:25:45:97.78%:99:4.4304E-25:34:1:1:0:45 1/1:46:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:37:21:16:38:97.37%:99:5.6582E-21:37:1:0:1:38 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:53:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:49:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:48:18:30:48:100%:99:1.554E-28:0:0:0:0:51 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:56 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:58:36:22:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:25:11:14:26:96.15%:99:5.4444E-14:39:1:0:1:26 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 2115139 . G A . PASS AC=14;AF=0.047;AN=300;ANN=A|stop_gained|HIGH|Rv1866_Rv1866|gene1902|transcript|Transcript_gene1902|Coding|1/1|c.2000G>A|p.Trp667*|2000/2337|2000/2337|667/778||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2115139G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2115139G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:50:0%:92:1E0:45:50:33:17:51 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:44:26:19:7:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:7:0%:14:1E0:47:7:5:2:7 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:41 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:37:1:1:0:28:3.7%:41:5E-1:45:26:15:11:28 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:29 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:26 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:53:0%:99:1E0:43:53:35:18:53 0/0:0:0:0:0:30:0%:55:1E0:46:30:10:20:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:17 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:56:0%:99:1E0:42:56:30:26:56 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:41 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:42 0/0:0:0:0:0:70:0%:99:1E0:48:70:34:36:71 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:46 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:43 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:42 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:41 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:38:0%:70:1E0:45:38:27:11:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:33 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:46 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:48 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:24 0/0:0:0:0:0:57:0%:99:1E0:41:57:34:23:58 0/0:0:0:0:0:13:0%:25:1E0:44:13:11:2:13 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:46:0%:85:1E0:39:46:28:18:46 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:44:0%:81:1E0:43:44:27:17:45 0/0:0:0:0:0:43:0%:82:1E0:42:43:29:14:44 0/0:0:0:0:0:43:0%:82:1E0:48:43:22:21:44 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:35 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:39 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:51:0%:97:1E0:45:51:36:15:52 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:60:0%:99:1E0:45:60:37:23:60 0/0:0:0:0:0:14:0%:25:1E0:50:14:6:8:14 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:16 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:27 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:43 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:42 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:45 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:39 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:26:11:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:19 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:47 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:39:1:1:0:46:2.17%:73:5E-1:44:45:23:22:46 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:29 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:25:0%:48:1E0:42:25:19:6:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:25 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:60:1:1:0:29:3.45%:45:5E-1:39:28:20:8:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:41 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:24:9:33 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:50 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:56:0%:99:1E0:42:56:32:24:56 0/0:0:0:0:0:45:0%:85:1E0:39:45:26:19:45 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:30 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:34 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:51 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:42 0/0:0:0:0:0:46:0%:85:1E0:39:46:28:18:46 0/0:0:0:0:0:40:0%:74:1E0:37:40:23:17:43 0/0:0:0:0:0:44:0%:81:1E0:39:44:26:18:45 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:45 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:46 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:34 0/0:0:0:0:0:42:0%:77:1E0:41:42:27:15:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:55:0%:99:1E0:37:55:29:26:56 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:39 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:38 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:44 0/0:0:0:0:0:40:0%:74:1E0:40:40:26:14:41 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:37 MTB_anc 2117071 . C A . PASS AC=72;AF=0.240;AN=300;ANN=A|synonymous_variant|LOW|Rv1867_Rv1867|gene1903|transcript|Transcript_gene1903|Coding|1/1|c.1308C>A|p.Thr436Thr|1308/1485|1308/1485|436/494||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2117071C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2117071C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:40:54:22:32:54 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:47:0%:89:1E0:42:47:19:28:48 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:28 0/0:0:0:0:0:29:0%:51:1E0:46:28:13:15:29 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:44 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:24 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:8:28:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:10:27:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:8:20:28 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:15:26:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:60:1:1:0:30:3.33%:44:5E-1:43:29:17:12:30 0/0:38:1:0:1:29:3.45%:45:5E-1:40:28:9:19:31 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:44 0/0:0:0:0:0:32:0%:59:1E0:41:32:9:23:32 0/0:0:0:0:0:58:0%:99:1E0:42:58:27:31:58 0/0:0:0:0:0:37:0%:70:1E0:41:37:12:25:37 0/0:0:0:0:0:59:0%:99:1E0:40:59:27:32:59 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:41:0%:78:1E0:39:41:15:26:41 0/0:38:1:0:1:19:5.26%:28:5E-1:41:18:8:10:20 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:32 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:53:0%:99:1E0:41:53:23:30:54 0/0:0:0:0:0:40:0%:74:1E0:39:40:10:30:42 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:41 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:21 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:32 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:9:22:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:42 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:30 0/0:0:0:0:0:43:0%:82:1E0:37:43:20:23:43 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 0/0:0:0:0:0:16:0%:29:1E0:42:16:7:9:16 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:21 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:42 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:23:0%:44:1E0:37:23:16:7:23 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 1/1:41:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:57 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:39 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:31:0%:59:1E0:36:31:12:19:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:29 0/0:0:0:0:0:16:0%:29:1E0:42:16:7:9:16 0/0:0:0:0:0:39:0%:74:1E0:47:39:13:26:39 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:10:21:31 0/0:0:0:0:0:46:0%:85:1E0:40:46:15:31:46 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:50:0%:92:1E0:39:50:20:30:51 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:28 1/1:39:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:33:0%:63:1E0:37:33:13:20:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:21 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:15 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:41:25:5:20:25 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:24:0%:44:1E0:41:24:7:17:24 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:37:36:19:17:37 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:26 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:35 0/0:0:0:0:0:37:0%:70:1E0:38:37:15:22:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:34 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:19:0%:37:1E0:37:19:5:14:19 0/0:0:0:0:0:47:0%:89:1E0:39:47:14:33:47 1/1:38:53:14:39:53:100%:99:1.5943E-31:0:0:0:0:53 0/0:0:0:0:0:31:0%:59:1E0:39:31:11:20:31 0/0:0:0:0:0:30:0%:55:1E0:40:30:9:21:31 1/1:38:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:53 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:50:0%:92:1E0:39:50:17:33:50 0/0:0:0:0:0:39:0%:74:1E0:37:39:14:25:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:33 0/0:0:0:0:0:34:0%:62:1E0:38:34:10:24:37 0/0:0:0:0:0:24:0%:44:1E0:40:24:6:18:26 0/0:0:0:0:0:30:0%:55:1E0:37:30:10:20:30 1/1:38:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:36 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:40:0%:74:1E0:39:40:12:28:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:39 0/0:0:0:0:0:39:0%:74:1E0:38:39:14:25:39 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:7:18:25 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:44:0%:81:1E0:39:44:15:29:44 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:25 0/0:0:0:0:0:26:0%:47:1E0:38:26:6:20:27 1/1:42:25:11:14:26:96.15%:99:5.4444E-14:34:1:1:0:27 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:16:30:47 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:30 MTB_anc 2120796 . A T . PASS AC=300;AF=1.00;AN=300;ANN=T|stop_gained&splice_region_variant|HIGH|Rv1870c_Rv1870c|gene1906|transcript|Transcript_gene1906|Coding|1/1|c.635T>A|p.Leu212*|635/636|635/636|212/211||WARNING_TRANSCRIPT_NO_STOP_CODON,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2120796A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2120796A>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:30:14:16:31:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:64:29:35:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:45:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:29:14:15:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:59:32:27:60:100%:99:4.1056E-35:0:0:0:0:61 1/1:47:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:47:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:64:23:41:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:44:73:40:33:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 2122618 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|lldD2_Rv1872c|gene1908|transcript|Transcript_gene1908|Coding|1/1|c.534C>T|p.Ala178Ala|534/1245|534/1245|178/414||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2122618G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2122618G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:53:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:21:13:8:22:95.45%:99:1.0931E-11:44:1:1:0:24 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:15:13:29:96.55%:99:9.9776E-16:37:1:1:0:30 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:52:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:21:10:11:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:79:37:42:79:100%:99:4.3185E-47:0:0:0:0:79 1/1:46:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:55 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:49:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:53:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:75:31:44:75:100%:99:1.0773E-44:0:0:0:0:76 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:43:66:37:29:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 2122625 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|lldD2_Rv1872c|gene1908|transcript|Transcript_gene1908|Coding|1/1|c.527C>T|p.Ala176Val|527/1245|527/1245|176/414||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2122625G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2122625G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:50:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:54:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:77:36:41:77:100%:99:6.8219E-46:0:0:0:0:77 1/1:47:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:72:27:45:72:100%:99:6.7558E-43:0:0:0:0:74 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:66:38:28:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:49:31:18:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 2122976 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|lldD2_Rv1872c|gene1908|transcript|Transcript_gene1908|Coding|1/1|c.176C>G|p.Ala59Gly|176/1245|176/1245|59/414||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2122976G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2122976G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:52:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:25:15:10:26:96.15%:99:5.4444E-14:37:1:0:1:26 1/1:42:17:10:7:18:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:33:18:15:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:68:38:30:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:55:17:38:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:52:27:25:53:100%:99:6.3169E-31:0:0:0:0:55 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:52:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:47:27:20:48:97.92%:99:6.1512E-28:0:0:0:0:49 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:34:13:21:35:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 2123146 . C T . PASS AC=72;AF=0.240;AN=300;ANN=T|synonymous_variant|LOW|lldD2_Rv1872c|gene1908|transcript|Transcript_gene1908|Coding|1/1|c.6G>A|p.Ala2Ala|6/1245|6/1245|2/414||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2123146C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2123146C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:43 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:50:0%:92:1E0:45:50:26:24:50 0/0:0:0:0:0:37:0%:70:1E0:48:37:13:24:37 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:41:0%:78:1E0:50:41:19:22:41 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:40 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:30 1/1:51:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:16:29:46 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:25 0/0:0:0:0:0:52:0%:96:1E0:45:52:24:28:52 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:60:1:0:1:27:3.7%:41:5E-1:49:26:12:14:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:10:23:34 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:51 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:36 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:35:0%:67:1E0:48:35:15:20:36 1/1:49:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:39:1:0:1:38:2.63%:58:5E-1:46:37:20:17:38 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:39:1:0:1:36:2.78%:55:5E-1:46:35:15:20:36 0/0:0:0:0:0:34:0%:62:1E0:48:34:13:21:34 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:41 0/0:0:0:0:0:79:0%:99:1E0:48:79:41:38:79 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:40 0/0:0:0:0:0:37:0%:70:1E0:50:37:20:17:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:46:0%:85:1E0:46:46:21:25:46 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:37:1:0:1:20:5%:27:5E-1:46:19:7:12:20 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:31 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:47 0/0:0:0:0:0:38:0%:70:1E0:47:38:14:24:38 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:37:1:1:0:34:2.94%:51:5E-1:47:33:15:18:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:38:1:0:1:47:2.13%:77:5E-1:43:46:19:27:47 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:43 1/1:47:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:51:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:13:0%:25:1E0:48:13:8:5:13 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:46:0%:85:1E0:46:46:20:26:46 1/1:48:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:19:0%:37:1E0:51:19:8:11:19 1/1:46:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:28 0/0:37:1:0:1:29:3.45%:45:5E-1:45:28:15:13:30 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:31 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:35 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:44 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:40:0%:74:1E0:49:40:17:23:40 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:28 1/1:49:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:31:0%:59:1E0:48:31:11:20:31 0/0:0:0:0:0:59:0%:99:1E0:42:59:29:30:60 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:49:0%:93:1E0:42:49:24:25:49 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:40 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:36:0%:66:1E0:48:36:23:13:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:60:1:0:1:18:5.56%:24:5E-1:46:17:12:5:18 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:25 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:41 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:50:0%:92:1E0:39:50:24:26:50 0/0:0:0:0:0:35:0%:67:1E0:41:35:11:24:37 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:53:0%:99:1E0:41:53:25:28:53 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:48 0/0:0:0:0:0:37:0%:70:1E0:38:37:8:29:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:24:16:41 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:51 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:40 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:58:0%:99:1E0:39:58:30:28:58 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:46 0/0:0:0:0:0:30:0%:55:1E0:49:30:19:11:30 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:52:0%:96:1E0:43:52:30:22:56 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 MTB_anc 2123169 . G T . PASS AC=3;AF=0.010;AN=300;ANN=T|intergenic_region|MODIFIER|lldD2_Rv1872c-Rv1873_Rv1873|gene1908-gene1909|intergenic_region|gene1908-gene1909|||n.2123169G>T||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:52:0%:96:1E0:45:52:28:24:52 0/0:0:0:0:0:39:0%:74:1E0:48:39:18:21:40 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:42:0%:77:1E0:50:42:19:23:42 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:42 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:48 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:11:24:35 0/0:0:0:0:0:53:0%:99:1E0:44:53:30:23:53 0/0:0:0:0:0:27:0%:52:1E0:51:27:12:15:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:15:20:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:18:10:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:38 0/0:0:0:0:0:32:0%:59:1E0:51:32:13:19:32 0/0:0:0:0:0:22:0%:40:1E0:44:22:7:15:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:75:0%:99:1E0:47:75:40:35:75 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/0:0:0:0:0:39:0%:74:1E0:49:39:23:16:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:47 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:21 0/0:0:0:0:0:32:0%:59:1E0:46:32:10:22:32 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:42 0/0:0:0:0:0:47:0%:89:1E0:45:47:26:21:47 0/0:0:0:0:0:36:0%:66:1E0:49:36:11:25:36 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:37:0%:70:1E0:49:37:21:16:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:42 0/0:0:0:0:0:42:0%:77:1E0:47:42:17:25:43 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:30 0/0:0:0:0:0:63:0%:99:1E0:49:63:32:31:63 0/0:0:0:0:0:22:0%:40:1E0:50:22:9:13:22 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:12:0%:21:1E0:49:12:7:5:12 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:19 0/0:0:0:0:0:47:0%:89:1E0:47:47:19:28:47 0/0:0:0:0:0:21:0%:40:1E0:49:21:8:13:21 0/0:0:0:0:0:18:0%:32:1E0:52:18:8:10:18 0/0:0:0:0:0:42:0%:77:1E0:47:42:16:26:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:43 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:37:0%:70:1E0:49:37:21:16:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:40:0%:74:1E0:49:40:18:22:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:40:0%:74:1E0:48:40:24:16:40 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:57 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:48:0%:89:1E0:45:48:25:23:49 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:11:21:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:35:0%:67:1E0:45:35:23:12:35 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:48:0%:89:1E0:40:48:24:24:48 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:40 0/0:60:1:1:0:28:3.57%:41:5E-1:43:27:16:11:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:50:0%:92:1E0:42:50:21:29:51 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:48:0%:89:1E0:40:48:24:24:49 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:38:1:1:0:50:2%:80:5E-1:43:49:29:20:51 0/0:0:0:0:0:36:0%:66:1E0:39:36:12:24:36 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:39 0/1:44:33:15:18:39:84.62%:99:2.9926E-16:40:6:2:4:40 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:54 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:40 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:46 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:46 0/0:0:0:0:0:62:0%:99:1E0:38:62:30:32:64 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:41 0/0:0:0:0:0:48:0%:89:1E0:42:48:30:18:48 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:40 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:48:0%:89:1E0:47:48:28:20:48 0/0:0:0:0:0:59:0%:99:1E0:43:59:34:25:60 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 MTB_anc 2123181 . C A . PASS AC=64;AF=0.213;AN=300;ANN=A|stop_gained|HIGH|Rv1873_Rv1873|gene1909|transcript|Transcript_gene1909|Coding|1/1|c.8C>A|p.Ser3*|8/438|8/438|3/145||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2123181C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2123181C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:39:1:1:0:26:3.85%:38:5E-1:49:25:13:12:26 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:39:0%:74:1E0:51:39:19:20:39 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:29 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:43 0/0:39:1:1:0:28:3.57%:41:5E-1:51:27:12:15:28 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:45 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:33:1:1:0:39:2.56%:62:5E-1:46:38:16:22:39 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:55:0%:99:1E0:43:55:32:23:55 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:29:0%:55:1E0:47:29:18:11:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:41 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:30:14:16:32:93.75%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:20 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:39:1:1:0:42:2.38%:66:5E-1:45:41:23:18:43 0/0:0:0:0:0:74:0%:99:1E0:47:74:40:34:74 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:40:0%:74:1E0:50:40:24:16:40 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:45 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:45 0/0:0:0:0:0:34:0%:62:1E0:49:34:10:24:34 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:17 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:27:0%:52:1E0:50:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:27 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:43 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:50:36:21:15:36 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:64:0%:99:1E0:49:64:34:30:66 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:25 0/0:0:0:0:0:31:0%:59:1E0:50:31:14:17:32 0/0:0:0:0:0:12:0%:21:1E0:49:12:7:5:12 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:49:0%:93:1E0:47:49:20:29:49 0/0:0:0:0:0:20:0%:36:1E0:51:20:9:11:20 0/0:0:0:0:0:19:0%:37:1E0:54:19:8:11:19 0/0:0:0:0:0:43:0%:82:1E0:47:43:15:28:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:42 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 1/1:49:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:29:0%:55:1E0:51:29:11:18:29 0/0:0:0:0:0:57:0%:99:1E0:42:57:28:29:57 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:49 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:27:11:38 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:43 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 0/0:60:1:0:1:40:2.5%:62:5E-1:40:39:16:23:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:51 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:45 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 1/1:42:36:15:21:37:97.3%:99:2.1762E-20:38:1:1:0:38 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:45 0/0:37:1:0:1:46:2.17%:73:5E-1:43:45:23:22:46 0/0:0:0:0:0:62:0%:99:1E0:39:62:29:33:63 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:41 0/0:0:0:0:0:52:0%:96:1E0:41:52:33:19:52 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:41 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:48:0%:89:1E0:46:48:28:20:48 0/0:0:0:0:0:61:0%:99:1E0:42:61:36:25:61 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 MTB_anc 2128372 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|glnA3_Rv1878|gene1914|transcript|Transcript_gene1914|Coding|1/1|c.351G>A|p.Thr117Thr|351/1353|351/1353|117/450||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2128372G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2128372G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:52:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:63:34:29:63:100%:99:1.657E-37:0:0:0:0:64 1/1:45:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:48:29:19:48:100%:99:1.554E-28:0:0:0:0:50 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:51:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:50:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:45:47:27:20:48:97.92%:99:7.6145E-27:60:1:0:1:49 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 2128870 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|glnA3_Rv1878|gene1914|transcript|Transcript_gene1914|Coding|1/1|c.849G>A|p.Leu283Leu|849/1353|849/1353|283/450||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2128870G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2128870G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:25:11:14:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:32:12:20:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:37:16:21:38:97.37%:99:5.6582E-21:32:1:1:0:38 1/1:44:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:48:17:31:48:100%:99:1.554E-28:0:0:0:0:52 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:49:19:30:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:65:38:27:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:34:22:12:35:97.14%:99:3.2089E-19:38:1:0:1:36 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2129281 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|glnA3_Rv1878|gene1914|transcript|Transcript_gene1914|Coding|1/1|c.1260A>C|p.Ala420Ala|1260/1353|1260/1353|420/450||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2129281A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2129281A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:52:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:60:30:30:60:100%:99:1.035E-35:0:0:0:0:61 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:53:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:52:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:61:28:33:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:20:11:9:21:95.24%:99:4.0873E-11:37:1:1:0:22 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:48:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:71:31:40:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:54:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:39:21:18:40:97.5%:99:3.8137E-22:38:1:0:1:40 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:41:19:22:42:97.62%:99:2.5612E-23:39:1:1:0:42 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:51:21:30:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:42:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 2129869 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv1879_Rv1879|gene1915|transcript|Transcript_gene1915|Coding|1/1|c.493C>T|p.Arg165Cys|493/1137|493/1137|165/378||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2129869C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2129869C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:40:54:29:25:54 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:16 0/0:0:0:0:0:56:0%:99:1E0:43:56:26:30:56 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:38:1:0:1:23:4.35%:34:5E-1:46:22:15:7:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:63:0%:99:1E0:42:63:30:33:65 0/0:0:0:0:0:16:0%:29:1E0:48:16:10:6:17 0/0:0:0:0:0:52:0%:96:1E0:43:52:18:34:52 0/0:0:0:0:0:33:0%:63:1E0:42:33:10:23:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:26:12:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:19 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:23 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:23 0/0:0:0:0:0:16:0%:29:1E0:41:16:10:6:16 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:43 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:63:0%:99:1E0:46:63:31:32:63 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:45:0%:85:1E0:46:45:30:15:45 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:40 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:36 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:54 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:51 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:46:0%:85:1E0:39:46:26:20:47 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:57 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:51 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:28 0/0:60:1:1:0:44:2.27%:69:5E-1:44:43:21:22:46 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:41 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:56:0%:99:1E0:45:56:27:29:58 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:36:1:0:1:36:2.78%:55:5E-1:47:35:20:15:37 0/0:0:0:0:0:55:0%:99:1E0:44:55:33:22:55 0/0:0:0:0:0:40:0%:74:1E0:40:40:14:26:40 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:48 0/0:0:0:0:0:16:0%:29:1E0:42:16:11:5:17 0/0:38:1:0:1:21:4.76%:31:5E-1:47:20:6:14:21 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:47 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:33 0/0:0:0:0:0:14:0%:25:1E0:46:14:6:8:14 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:33:1:1:0:23:4.35%:34:5E-1:43:22:13:9:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:47 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:42 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:21 0/0:0:0:0:0:53:0%:99:1E0:41:53:24:29:53 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:53:0%:99:1E0:41:53:27:26:53 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:10:24:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:38:1:1:0:25:4%:38:5E-1:41:24:12:12:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:29 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:19 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:19 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:41 0/0:0:0:0:0:50:0%:92:1E0:39:50:27:23:51 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:47 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:24:13:38 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:32 0/0:0:0:0:0:55:0%:99:1E0:42:55:30:25:55 0/0:0:0:0:0:65:0%:99:1E0:41:65:30:35:65 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:63:0%:99:1E0:41:63:32:31:67 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:49 0/0:0:0:0:0:59:0%:99:1E0:39:59:29:30:60 0/0:0:0:0:0:43:0%:82:1E0:36:43:23:20:45 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:49:0%:93:1E0:41:49:25:24:52 0/0:0:0:0:0:47:0%:89:1E0:42:47:30:17:51 0/0:0:0:0:0:45:0%:85:1E0:36:45:22:23:48 0/0:0:0:0:0:51:0%:97:1E0:38:51:32:19:52 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:42 0/0:0:0:0:0:47:0%:89:1E0:36:47:27:20:49 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:62:0%:99:1E0:38:62:30:32:63 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:55:0%:99:1E0:42:55:26:29:56 0/0:0:0:0:0:41:0%:78:1E0:39:41:24:17:41 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:34 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:29 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:42 0/0:0:0:0:0:41:0%:78:1E0:40:41:30:11:44 MTB_anc 2130529 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv1879_Rv1879-cyp140_Rv1880c|gene1915-gene1916|intergenic_region|gene1915-gene1916|||n.2130529G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:59:23:36:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:27 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:72:38:34:72:100%:99:6.7558E-43:0:0:0:0:76 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:68:29:39:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:40:41:14:27:42:97.62%:99:2.5612E-23:37:1:0:1:42 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:47:25:22:48:97.92%:99:6.1512E-28:0:0:0:0:49 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:40:19:21:41:97.56%:99:9.8874E-23:32:1:1:0:43 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 2133468 . T TTCGCATGCCGTCACC . PASS AC=173;AF=0.577;AN=300;ANN=TTCGCATGCCGTCACC|disruptive_inframe_insertion|MODERATE|Rv1883c_Rv1883c|gene1919|transcript|Transcript_gene1919|Coding|1/1|c.224_225insGGTGACGGCATGCGA|p.Glu75_Pro76insValThrAlaCysGlu|224/462|224/462|75/153||,TTCGCATGCCGTCACC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2133468_2133469insTCGCATGCCGTCACC||||||,TTCGCATGCCGTCACC|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2133468_2133469insTCGCATGCCGTCACC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:35:16:19:39:89.74%:99:8.9137E-21:0:0:0:0:39 0/1:47:11:4:7:17:61.11%:53:4.8074E-6:60:1:0:1:18 0/1:44:30:14:16:38:78.95%:99:9.89E-16:44:3:2:1:38 0/1:49:19:7:12:27:70.37%:93:4.7003E-10:46:2:0:2:27 0/1:42:17:9:8:20:80.95%:82:5.9414E-9:46:2:1:1:21 0/1:46:19:9:10:25:76%:93:4.7003E-10:32:2:2:0:25 0/1:49:27:11:16:31:87.1%:99:4.6134E-14:41:3:2:1:31 0/1:43:25:15:10:31:80.65%:99:2.0853E-13:30:2:2:0:31 0/1:50:14:8:6:18:73.68%:65:2.5454E-7:60:2:1:1:19 1/1:47:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:21 0/1:46:21:11:10:28:72.41%:99:1.0931E-11:37:1:0:1:29 1/1:45:34:16:18:35:94.44%:99:3.2089E-19:34:1:0:1:36 0/1:40:6:1:5:8:75%:29:1.0823E-3:0:0:0:0:8 1/1:40:48:25:23:49:94.12%:99:1.554E-28:0:0:0:0:51 1/1:42:13:8:5:14:92.86%:70:9.6148E-8:0:0:0:0:14 0/1:46:26:12:14:30:86.67%:99:2.0165E-15:0:0:0:0:30 0/1:41:21:8:13:27:77.78%:99:3.6437E-11:35:2:2:0:27 0/1:44:16:7:9:23:64%:81:7.7134E-9:60:1:1:0:25 0/1:44:18:7:11:25:69.23%:92:5.6585E-10:33:1:0:1:26 1/1:45:16:7:9:17:94.12%:87:1.6637E-9:0:0:0:0:17 0/1:42:24:14:10:29:82.76%:99:2.0568E-13:29:1:1:0:29 0/1:43:32:15:17:37:82.05%:99:4.7095E-18:33:1:0:1:40 0/1:45:23:12:11:29:76.67%:99:1.2146E-13:0:0:0:0:30 0/1:45:26:13:13:32:81.25%:99:2.0165E-15:0:0:0:0:32 1/1:41:24:12:12:26:92.31%:99:3.101E-14:0:0:0:0:26 0/1:41:9:4:5:12:69.23%:46:2.0568E-5:0:0:0:0:13 0/1:45:18:6:12:24:75%:99:1.1019E-10:0:0:0:0:24 0/1:45:16:7:9:22:72.73%:81:7.7134E-9:34:1:1:0:22 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:41:17:9:8:20:85%:86:2.0936E-9:34:1:0:1:20 0/1:45:21:9:12:27:77.78%:99:1.0931E-11:37:1:1:0:27 0/1:43:14:5:9:17:82.35%:76:2.4927E-8:0:0:0:0:17 0/1:46:23:13:10:28:82.14%:99:7.7525E-13:34:1:1:0:28 0/1:38:20:8:12:27:71.43%:91:6.3493E-10:46:4:3:1:29 0/1:45:33:18:15:38:84.62%:99:1.3852E-19:0:0:0:0:39 0/1:43:23:11:12:27:85.19%:99:2.7767E-12:33:2:0:2:27 0/1:45:37:21:16:46:80.43%:99:1.1479E-19:41:3:2:1:47 0/1:42:38:16:22:51:74.51%:99:6.0539E-19:37:6:4:2:52 0/1:47:28:11:17:34:80%:99:9.9776E-16:29:1:1:0:36 0/1:47:35:14:21:38:89.74%:99:4.2437E-19:44:2:1:1:40 0/1:43:21:7:14:27:77.78%:99:3.6437E-11:33:2:1:1:27 0/1:43:27:17:10:37:72.97%:99:3.7915E-15:34:1:0:1:37 0/1:40:21:11:10:25:84%:99:3.6437E-11:35:2:1:1:25 0/1:42:15:7:8:19:78.95%:81:6.4467E-9:0:0:0:0:19 1/1:43:21:8:13:23:91.3%:99:1.0931E-11:31:1:1:0:23 0/1:47:28:13:15:34:82.35%:99:1.3074E-16:0:0:0:0:34 0/1:38:18:9:9:21:81.82%:81:7.1052E-9:40:4:3:1:22 0/1:43:31:19:12:39:77.5%:99:8.2416E-17:32:2:0:2:40 0/1:43:22:9:13:25:84.62%:99:4.7526E-13:0:0:0:0:26 0/1:45:28:10:18:34:80%:99:1.2857E-14:44:3:2:1:36 0/1:50:13:7:6:16:81.25%:64:3.7391E-7:60:1:1:0:16 1/1:43:26:18:8:24:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:18:7:11:19:94.74%:99:1.1019E-10:0:0:0:0:19 0/1:43:32:11:21:38:84.21%:99:4.7095E-18:33:1:0:1:38 1/1:49:18:8:10:20:90%:99:1.1019E-10:0:0:0:0:20 0/1:40:42:20:22:50:82.35%:99:5.9562E-25:0:0:0:0:51 0/1:46:33:21:12:37:89.19%:99:5.9366E-18:47:2:1:1:38 0/1:45:18:9:9:22:81.82%:99:1.1019E-10:0:0:0:0:22 0/1:44:32:12:20:37:86.49%:99:7.5196E-17:33:3:3:0:37 0/1:44:25:10:15:31:80.65%:99:7.9107E-15:0:0:0:0:32 1/1:46:25:15:10:27:92.59%:99:5.4444E-14:38:1:0:1:29 0/1:41:26:17:9:31:81.25%:99:1.4382E-14:33:1:1:0:32 0/1:42:38:19:19:48:79.17%:99:8.0088E-21:36:2:1:1:48 0/1:43:20:7:13:25:76.92%:99:7.2544E-12:0:0:0:0:26 0/1:46:24:15:9:29:82.76%:99:3.101E-14:0:0:0:0:29 1/1:42:50:25:25:52:90.91%:99:9.0394E-28:40:2:0:2:55 0/1:45:15:7:8:23:65.22%:71:7.3277E-8:35:2:2:0:23 0/1:48:30:10:20:37:81.08%:99:6.8754E-17:38:1:0:1:38 0/1:49:20:11:9:25:80%:99:7.2544E-12:0:0:0:0:25 0/1:42:20:12:8:23:83.33%:99:7.2544E-12:0:0:0:0:24 0/1:47:34:18:16:38:82.93%:99:5.6582E-18:30:3:1:2:42 0/1:49:23:13:10:31:74.19%:98:1.3219E-10:45:8:6:2:31 0/1:53:15:9:6:22:68.18%:75:2.8282E-8:34:1:0:1:22 0/1:47:31:14:17:37:83.78%:99:8.2416E-17:47:2:1:1:37 0/1:47:37:15:22:44:84.09%:99:5.6582E-21:38:1:0:1:44 0/1:47:19:11:8:25:76%:89:1.0931E-9:43:3:1:2:25 0/1:40:20:10:10:24:76.92%:98:1.3117E-10:33:2:1:1:26 1/1:47:34:16:18:34:97.14%:99:3.5146E-20:0:0:0:0:35 0/1:45:19:10:9:29:65.52%:93:4.7003E-10:29:2:2:0:29 0/1:43:16:9:7:19:80%:81:7.7134E-9:37:1:1:0:20 0/1:38:21:12:9:26:72.41%:99:1.8578E-12:0:0:0:0:28 1/1:43:38:18:20:42:90.48%:99:1.4508E-22:0:0:0:0:42 0/1:44:34:21:13:40:82.93%:99:3.5146E-20:0:0:0:0:41 0/1:47:27:14:13:35:77.14%:99:3.7915E-15:60:1:0:1:35 0/1:42:26:15:11:30:83.87%:99:2.0165E-15:0:0:0:0:31 0/1:38:20:14:6:23:86.96%:99:4.0873E-11:35:1:1:0:23 1/1:42:22:10:12:23:95.65%:99:4.7526E-13:0:0:0:0:23 0/1:45:23:11:12:27:85.19%:99:7.7525E-13:38:1:0:1:27 0/1:47:24:16:8:30:77.42%:99:2.0568E-13:60:1:0:1:31 1/1:52:22:15:7:24:91.67%:99:2.9149E-12:34:1:0:1:24 0/1:47:34:20:14:40:82.93%:99:3.5146E-20:0:0:0:0:41 0/1:52:27:9:18:31:87.1%:99:3.7915E-15:50:1:1:0:31 0/1:38:40:15:25:44:86.96%:99:5.6346E-22:34:2:1:1:47 0/1:42:30:15:15:40:75%:99:8.4556E-18:0:0:0:0:41 1/1:46:41:22:19:44:91.11%:99:2.3541E-24:0:0:0:0:45 0/1:40:19:7:12:21:86.36%:99:2.8292E-11:0:0:0:0:23 0/1:38:18:8:10:22:78.26%:99:1.1019E-10:0:0:0:0:23 0/1:39:21:12:9:24:80.77%:99:3.6437E-11:33:2:0:2:26 0/1:42:29:12:17:33:85.29%:99:1.1344E-15:33:2:0:2:34 0/1:42:30:14:16:34:88.24%:99:6.8754E-17:26:1:1:0:35 0/1:45:16:8:8:18:88.89%:87:1.6637E-9:0:0:0:0:18 1/1:44:29:14:15:32:90.62%:99:2.6212E-16:34:1:1:0:33 0/1:41:28:15:13:34:82.35%:99:9.9776E-16:33:1:0:1:34 0/1:42:18:7:11:25:72%:87:1.6758E-9:30:2:1:1:25 0/1:38:19:12:7:21:86.36%:99:2.8292E-11:0:0:0:0:22 0/1:39:16:7:9:18:84.21%:81:7.7134E-9:34:1:1:0:19 0/1:43:24:12:12:31:77.42%:99:2.0853E-12:34:3:1:2:31 0/1:43:31:17:14:37:79.49%:99:1.8007E-17:26:1:1:0:40 0/1:42:30:24:6:34:85.71%:99:8.4556E-18:0:0:0:0:35 0/1:48:27:17:10:33:81.82%:99:5.1363E-16:0:0:0:0:33 1/1:41:26:15:11:28:92.86%:99:1.4382E-14:29:1:1:0:28 0/1:43:16:9:7:22:72.73%:87:1.6637E-9:0:0:0:0:22 1/1:39:23:12:11:25:92%:99:1.2146E-13:0:0:0:0:25 0/1:45:27:17:10:30:81.82%:99:5.1363E-16:0:0:0:0:33 0/1:40:29:14:15:31:87.88%:99:3.3259E-17:0:0:0:0:34 0/1:38:32:19:13:39:82.05%:99:4.7095E-18:34:1:0:1:40 0/1:36:26:14:12:29:83.87%:99:2.0165E-15:0:0:0:0:31 0/1:44:36:20:16:45:80%:99:1.2627E-18:34:4:2:2:45 0/1:36:16:9:7:21:72.73%:81:7.7134E-9:38:1:1:0:22 0/1:36:52:29:23:59:83.87%:99:3.1317E-28:31:3:3:0:63 1/1:42:42:23:19:44:95.45%:99:5.9562E-25:0:0:0:0:45 0/1:41:21:13:8:25:84%:99:1.0931E-11:60:1:1:0:25 1/1:42:23:7:16:25:92%:99:7.7525E-13:34:1:0:1:25 0/1:39:35:12:23:42:83.33%:99:8.3613E-20:33:1:1:0:42 0/1:41:29:12:17:33:85.29%:99:3.3259E-17:0:0:0:0:34 0/1:39:17:7:10:30:56.67%:82:5.9414E-9:35:2:1:1:30 0/1:37:27:14:13:31:81.82%:99:3.7915E-15:36:1:0:1:33 0/1:41:37:15:22:45:80.43%:99:5.7269E-22:0:0:0:0:47 0/1:38:30:16:14:40:69.77%:99:9.89E-16:30:3:2:1:43 0/1:39:20:8:12:24:80%:98:1.3117E-10:32:2:1:1:25 0/1:38:26:14:12:30:86.67%:99:2.0165E-15:0:0:0:0:30 0/1:37:25:9:16:33:73.53%:99:5.4444E-14:33:1:1:0:34 0/1:39:28:11:17:32:82.35%:99:9.9776E-16:29:1:1:0:34 0/1:37:24:15:9:27:80%:99:7.6222E-13:31:2:2:0:30 0/1:39:16:7:9:22:72.73%:87:1.6637E-9:0:0:0:0:22 0/1:47:24:14:10:33:72.73%:99:2.0568E-13:34:1:0:1:33 0/1:39:44:24:20:50:86.27%:99:1.2056E-23:34:3:2:1:51 0/1:38:30:17:13:35:83.33%:99:9.89E-16:41:3:0:3:36 0/1:44:27:10:17:35:75%:99:1.5465E-14:48:2:1:1:36 0/1:43:34:16:18:41:77.27%:99:1.6239E-17:35:4:2:2:44 0/1:41:28:11:17:32:82.35%:99:1.2857E-14:35:3:1:2:34 0/1:43:14:9:5:21:63.64%:65:2.5454E-7:34:2:2:0:22 0/1:42:30:16:14:33:88.24%:99:6.8754E-17:37:1:0:1:34 0/1:45:35:15:20:43:81.4%:99:4.2437E-19:33:2:1:1:43 0/1:46:26:15:11:35:72.22%:99:5.6872E-14:34:2:0:2:36 0/1:45:15:7:8:22:68.18%:61:7.4178E-7:39:7:7:0:23 0/1:38:23:9:14:25:82.14%:99:1.2146E-13:0:0:0:0:28 0/1:42:32:17:15:44:71.11%:99:5.4567E-19:0:0:0:0:45 0/1:42:35:15:20:46:76.09%:99:1.5466E-18:36:3:1:2:47 0/1:35:22:10:12:28:68.75%:99:1.0078E-11:35:2:1:1:33 MTB_anc 2133475 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv1883c_Rv1883c|gene1919|transcript|Transcript_gene1919|Coding|1/1|c.218T>C|p.Val73Ala|218/462|218/462|73/153||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2133475A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2133475A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:12:0%:21:1E0:51:12:4:8:12 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:23 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:33:1:0:1:31:3.23%:48:5E-1:47:30:17:13:31 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:10:0%:17:1E0:39:10:2:8:11 0/0:0:0:0:0:58:0%:99:1E0:39:58:28:30:58 0/0:0:0:0:0:15:0%:29:1E0:40:15:10:5:18 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:38:1:1:0:29:3.45%:45:5E-1:42:28:9:19:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:22 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:32 0/0:0:0:0:0:13:0%:25:1E0:48:13:7:6:14 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:20 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:19 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:26 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:15 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:32 0/0:35:1:1:0:24:4.17%:34:5E-1:41:23:9:14:25 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:38:0%:70:1E0:47:38:22:16:41 0/0:24:1:1:0:41:2.44%:66:5E-1:42:40:19:21:44 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:28:0%:51:1E0:39:28:9:19:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:38:1:0:1:26:3.85%:38:5E-1:42:25:12:13:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:29 0/0:42:4:3:1:28:14.29%:23:5.5746E-2:41:24:12:12:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:15:24:41 0/0:0:0:0:0:14:0%:25:1E0:52:14:7:7:14 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:33 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:19 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:36 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:46 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:44 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:37:3:3:0:43:6.98%:53:1.2059E-1:44:40:16:24:43 0/0:36:1:0:1:35:2.86%:55:5E-1:45:34:15:19:35 0/0:33:1:0:1:34:2.94%:51:5E-1:44:33:16:17:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:31 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:25:0%:48:1E0:46:25:8:17:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:29 0/0:0:0:0:0:61:0%:99:1E0:43:61:30:31:62 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:20 0/0:34:1:0:1:36:2.78%:55:5E-1:47:35:14:21:38 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:42 0/1:44:7:5:2:35:20%:22:5.6095E-3:46:28:15:13:37 0/0:0:0:0:0:15:0%:29:1E0:50:15:8:7:16 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:43 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:26 0/0:35:1:1:0:21:4.76%:31:5E-1:40:20:10:10:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:27 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:47 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:31 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:23 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:35:1:0:1:29:3.45%:45:5E-1:44:28:12:16:31 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:53:27:18:9:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:32:0%:59:1E0:50:32:11:21:32 0/0:0:0:0:0:52:0%:96:1E0:38:52:20:32:54 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:45 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:38 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:23 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:22 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:26:6:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:30 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:39 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:41 0/0:0:0:0:0:31:0%:59:1E0:37:31:16:15:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:22 0/0:0:0:0:0:56:0%:99:1E0:39:56:31:25:57 0/0:0:0:0:0:52:0%:96:1E0:41:52:28:24:54 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:27 0/0:0:0:0:0:39:0%:74:1E0:38:39:14:25:40 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:37 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:31 0/0:0:0:0:0:35:0%:67:1E0:37:35:16:19:35 0/0:0:0:0:0:45:0%:85:1E0:40:45:19:26:48 0/0:35:1:1:0:39:2.56%:62:5E-1:38:38:19:19:40 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:29 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:33 0/0:0:0:0:0:32:0%:59:1E0:37:32:8:24:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:36 0/0:0:0:0:0:33:0%:63:1E0:37:33:18:15:35 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:22 0/0:34:1:0:1:31:3.23%:48:5E-1:44:30:15:15:31 0/0:38:1:0:1:54:1.85%:87:5E-1:39:53:28:25:55 0/0:35:1:0:1:34:2.94%:51:5E-1:42:33:18:15:37 0/0:0:0:0:0:33:0%:63:1E0:42:33:10:23:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:37 0/0:36:1:1:0:17:5.88%:24:5E-1:45:16:10:6:18 0/0:38:1:0:1:35:2.86%:55:5E-1:42:34:17:17:35 0/0:37:1:1:0:41:2.44%:66:5E-1:42:40:17:23:42 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:36 0/0:38:5:5:0:21:23.81%:12:2.3921E-2:47:16:7:9:25 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:38:1:0:1:45:2.22%:73:5E-1:41:44:19:25:47 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:38 MTB_anc 2137521 . A ACTCCGATCAC . PASS AC=220;AF=0.733;AN=300;ANN=ACTCCGATCAC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2137521_2137522insCTCCGATCAC||||||,ACTCCGATCAC|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2137521_2137522insCTCCGATCAC||||||,ACTCCGATCAC|intragenic_variant|MODIFIER|Rv1887a_Rv1887a|gene1924|gene_variant|gene1924|||n.2137521_2137522insCTCCGATCAC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:48:24:24:50:96%:99:1.3143E-26:49:2:1:1:50 0/1:51:26:9:17:32:81.25%:99:8.0999E-13:49:5:2:3:32 1/1:46:56:26:30:57:96.55%:99:2.8822E-31:36:2:1:1:58 0/1:46:20:10:10:24:80%:89:1.1273E-9:43:5:3:2:25 1/1:42:23:12:11:24:95.83%:99:7.7525E-13:60:1:0:1:25 0/1:47:21:10:11:26:80.77%:94:3.4262E-10:45:5:3:2:26 0/1:49:24:12:12:28:85.71%:99:4.7015E-12:41:4:1:3:28 0/1:47:19:12:7:26:73.08%:80:8.6144E-9:43:7:3:4:26 0/1:47:35:17:18:38:87.5%:99:4.5343E-18:35:4:2:2:40 0/1:49:23:15:8:26:88.46%:99:7.3681E-12:36:3:2:1:26 0/1:49:33:14:19:38:86.84%:99:1.3966E-16:41:5:3:2:38 1/1:43:30:17:13:31:96.77%:99:6.8754E-17:38:1:1:0:32 1/1:48:20:10:10:21:90.91%:98:1.3117E-10:49:2:0:2:22 0/1:43:32:13:19:37:86.49%:99:4.8717E-16:35:5:2:3:37 1/1:47:18:7:11:19:94.74%:92:5.6585E-10:38:1:1:0:19 0/1:48:30:18:12:34:88.24%:99:2.5943E-15:46:4:1:3:34 0/1:44:26:10:16:29:89.66%:99:1.6496E-13:45:3:2:1:29 0/1:49:20:8:12:25:80%:95:3.1579E-10:51:3:0:3:26 1/1:49:19:6:13:21:90.48%:93:4.7003E-10:49:2:0:2:21 0/1:51:23:10:13:27:85.19%:99:2.7767E-12:49:2:2:0:27 0/1:45:21:10:11:29:72.41%:90:8.7917E-10:38:7:5:2:29 1/1:45:56:28:28:60:93.33%:99:6.5764E-30:36:4:2:2:60 0/1:51:37:20:17:44:84.09%:99:2.1068E-18:44:6:4:2:44 0/1:46:28:17:11:32:87.5%:99:3.2142E-14:34:4:2:2:32 0/1:43:26:10:16:29:89.66%:99:1.6496E-13:34:3:0:3:29 0/1:48:24:10:14:28:82.76%:99:4.7015E-12:47:4:1:3:29 0/1:49:22:11:11:26:84.62%:99:2.5916E-11:42:3:1:2:26 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 0/1:48:18:8:10:22:81.82%:81:7.1052E-9:35:4:1:3:22 0/1:47:15:9:6:17:88.24%:71:7.3277E-8:32:2:0:2:17 1/1:44:31:17:14:32:93.94%:99:8.2416E-17:49:2:1:1:33 1/1:44:28:11:17:29:96.55%:99:9.9776E-16:37:1:1:0:29 0/1:48:33:17:16:38:86.84%:99:1.3966E-16:41:5:3:2:38 1/1:46:25:12:13:26:96.15%:99:5.4444E-14:38:1:0:1:26 0/1:51:34:17:17:40:85%:99:5.6582E-18:32:3:2:1:40 1/1:47:28:7:21:30:93.33%:99:4.194E-15:32:2:1:1:30 1/1:44:31:15:16:33:93.94%:99:1.8007E-17:38:1:0:1:33 1/1:49:57:30:27:63:90.48%:99:1.9864E-29:40:6:2:4:63 1/1:48:40:20:20:43:93.02%:99:2.287E-21:42:3:0:3:43 1/1:45:27:14:13:28:96.43%:99:3.7915E-15:33:1:0:1:28 0/1:41:22:10:12:28:78.57%:97:1.7583E-10:39:6:4:2:28 1/1:46:36:15:21:40:90%:99:4.2179E-19:33:3:0:3:40 0/1:46:14:8:6:16:87.5%:65:2.5454E-7:44:2:2:0:16 0/1:43:20:6:14:24:80%:89:1.1273E-9:46:5:4:1:25 0/1:43:18:10:8:24:75%:77:1.8413E-8:36:6:1:5:24 1/1:43:22:11:11:23:91.67%:99:1.0078E-11:47:2:0:2:24 0/1:46:30:18:12:35:85.71%:99:5.8653E-15:41:5:2:3:35 0/1:45:29:14:15:35:80.56%:99:7.2821E-14:37:7:6:1:36 0/1:41:43:22:21:52:81.13%:99:1.0955E-20:43:9:3:6:53 1/1:49:44:18:26:46:95.65%:99:4.4304E-25:38:1:0:1:46 1/1:52:22:8:14:24:91.67%:99:1.0078E-11:60:2:1:1:24 0/1:43:25:14:11:29:83.33%:99:1.3609E-12:41:4:2:2:30 0/1:50:23:14:9:27:85.19%:99:7.3681E-12:36:3:1:2:27 0/1:49:38:13:25:43:88.37%:99:2.5797E-19:45:5:4:1:43 0/1:43:25:13:12:30:83.33%:99:1.3609E-12:35:4:1:3:30 1/1:43:29:15:14:29:96.67%:99:2.6212E-16:38:1:0:1:30 0/1:49:26:9:17:32:81.25%:99:1.5064E-12:38:6:3:3:32 0/1:45:26:10:16:31:83.87%:99:1.6496E-13:36:3:0:3:31 1/1:46:33:14:19:35:94.29%:99:5.9366E-18:31:2:2:0:35 1/1:48:32:17:15:34:91.43%:99:2.2142E-17:33:2:1:1:35 0/1:47:29:17:12:33:87.88%:99:9.1482E-15:43:4:3:1:33 1/1:42:38:22:16:41:90.48%:99:9.7197E-20:42:4:1:3:42 0/1:44:26:11:15:33:78.79%:99:2.5824E-12:35:7:2:5:33 0/1:49:25:14:11:29:86.21%:99:5.8768E-13:44:3:1:2:29 1/1:49:46:19:27:50:92%:99:8.6743E-25:37:3:3:0:50 1/1:44:43:25:18:45:95.56%:99:1.0412E-23:60:2:1:1:45 1/1:45:28:9:19:30:93.33%:99:4.194E-15:46:2:1:1:30 0/1:48:41:19:22:48:85.42%:99:3.1535E-20:39:7:3:4:48 0/1:49:14:5:9:18:77.78%:60:8.0605E-7:54:4:1:3:18 0/1:50:20:7:13:26:76.92%:87:1.8273E-9:49:6:2:4:26 0/1:48:37:16:21:44:84.09%:99:4.4107E-18:46:7:3:4:44 0/1:50:26:13:13:30:86.67%:99:3.9214E-13:49:4:2:2:30 1/1:46:19:9:10:21:90.48%:93:4.7003E-10:38:2:1:1:21 0/1:51:31:17:14:39:79.49%:99:1.1554E-14:50:8:5:3:39 1/1:44:33:16:17:35:94.29%:99:1.2301E-18:32:1:0:1:35 1/1:46:33:16:17:35:94.29%:99:5.9366E-18:36:2:2:0:35 0/1:45:25:8:17:30:83.33%:99:5.8768E-13:43:3:2:1:30 0/1:49:30:14:16:36:83.33%:99:5.8653E-15:47:5:2:3:36 0/1:45:21:12:9:25:84%:97:1.8789E-10:35:4:2:2:25 0/1:42:19:10:9:24:79.17%:84:3.6826E-9:39:5:2:3:24 0/1:48:28:14:14:33:84.85%:99:3.2142E-14:43:4:2:2:33 0/1:44:30:19:11:36:81.08%:99:2.1946E-14:37:7:4:3:37 0/1:49:26:17:9:31:83.87%:99:8.0999E-13:44:5:2:3:31 0/1:45:30:11:19:36:83.33%:99:9.89E-16:45:3:3:0:36 0/1:43:28:13:15:30:87.5%:99:3.2142E-14:41:4:2:2:33 0/1:45:34:15:19:38:89.47%:99:1.5887E-18:47:2:0:2:38 0/1:43:27:16:11:31:87.1%:99:1.125E-13:46:4:3:1:31 1/1:47:25:11:14:26:96.15%:99:5.4444E-14:60:1:0:1:26 0/1:46:32:14:18:38:84.21%:99:1.0241E-15:42:6:2:4:38 1/1:46:27:13:14:28:96.43%:99:3.7915E-15:38:1:0:1:28 1/1:49:36:15:21:39:92.31%:99:4.2179E-19:37:3:3:0:39 0/1:53:24:13:11:28:85.71%:99:4.7015E-12:49:4:2:2:28 1/1:40:41:20:21:44:93.18%:99:6.1775E-22:37:3:3:0:44 0/1:43:25:7:18:30:80.65%:99:4.9949E-12:44:6:1:5:31 1/1:44:45:23:22:47:93.75%:99:7.2338E-25:37:2:1:1:48 1/1:45:29:9:20:29:96.67%:99:2.6212E-16:34:1:0:1:30 0/1:47:19:7:12:23:82.61%:89:1.0931E-9:35:3:2:1:24 1/1:44:32:15:17:33:94.12%:99:2.2142E-17:38:2:1:1:34 1/1:42:37:22:15:38:92.5%:99:1.1479E-19:34:3:1:2:40 1/1:47:43:21:22:47:91.49%:99:1.0412E-23:33:2:1:1:47 0/1:43:27:13:14:33:81.82%:99:4.5192E-13:36:6:2:4:33 1/1:49:25:14:11:27:92.59%:99:2.0853E-13:38:2:1:1:27 1/1:47:24:12:12:25:96%:99:2.0568E-13:38:1:1:0:25 1/1:44:23:13:10:24:95.83%:99:7.7525E-13:60:1:1:0:24 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:28:20:8:30:93.33%:99:9.9776E-16:32:1:0:1:30 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 0/1:44:25:9:16:30:83.33%:99:2.745E-12:41:5:2:3:30 0/1:47:28:17:11:32:87.5%:99:1.2857E-14:36:3:2:1:32 0/1:44:23:16:7:26:88.46%:99:7.3681E-12:36:3:0:3:26 1/1:42:35:15:20:37:94.59%:99:4.2437E-19:35:2:1:1:37 1/1:49:28:15:13:31:90.32%:99:1.2857E-14:45:3:1:2:31 1/1:39:29:18:11:32:90.62%:99:1.1344E-15:34:2:2:0:32 0/1:45:26:12:14:29:89.66%:99:1.6496E-13:35:3:1:2:29 1/1:42:40:19:21:42:93.02%:99:5.6346E-22:35:2:0:2:44 0/1:42:38:20:18:43:88.37%:99:2.5797E-19:40:5:3:2:43 0/1:46:26:14:12:30:86.67%:99:3.9214E-13:35:4:1:3:30 0/1:45:35:19:16:39:89.74%:99:4.5343E-18:35:4:3:1:39 1/1:39:18:10:8:20:90%:87:1.6758E-9:33:2:1:1:20 0/1:44:40:14:26:47:83.33%:99:2.2074E-19:34:8:4:4:48 0/1:45:44:25:19:51:86.27%:99:7.5242E-22:34:7:5:2:52 1/1:46:27:12:15:29:93.1%:99:1.5465E-14:48:2:1:1:29 1/1:44:24:12:12:25:96%:99:2.0568E-13:37:1:1:0:26 1/1:43:33:16:17:34:94.29%:99:5.9366E-18:34:2:2:0:35 1/1:40:33:14:19:33:97.06%:99:1.2301E-18:38:1:0:1:35 1/1:43:45:18:27:48:93.75%:99:3.2362E-24:35:3:2:1:48 1/1:39:39:21:18:42:90.7%:99:2.6872E-20:43:4:3:1:44 1/1:44:32:15:17:33:91.43%:99:2.2142E-17:37:2:1:1:36 0/1:43:36:21:15:42:83.72%:99:1.5048E-17:38:7:5:2:43 0/1:45:35:15:20:41:85.37%:99:4.5343E-18:35:4:4:0:41 1/1:42:32:14:18:35:91.43%:99:7.5196E-17:36:3:1:2:35 0/1:45:41:20:21:47:87.23%:99:5.7183E-21:35:5:3:2:47 1/1:46:27:10:17:30:90%:99:4.6134E-14:37:3:1:2:31 1/1:41:32:13:19:34:91.43%:99:2.2142E-17:37:2:1:1:35 1/1:45:28:14:14:31:90.32%:99:1.2857E-14:32:3:1:2:31 0/1:43:28:12:16:33:84.85%:99:1.2857E-14:37:3:3:0:33 1/1:43:57:32:25:62:90.48%:99:1.7664E-30:37:4:2:2:63 0/1:46:30:13:17:37:81.08%:99:1.1855E-14:38:6:3:3:37 1/1:43:35:16:19:36:94.59%:99:4.2437E-19:35:2:2:0:37 0/1:41:36:18:18:42:85.71%:99:3.2269E-18:35:5:4:1:42 0/1:41:35:16:19:39:89.74%:99:4.5343E-18:36:4:1:3:39 1/1:45:22:10:12:24:91.67%:99:2.9149E-12:33:1:1:0:24 0/1:43:29:14:15:34:85.29%:99:2.0235E-14:41:5:4:1:35 0/1:47:43:21:22:48:89.58%:99:1.5372E-22:37:4:2:2:48 1/1:45:40:17:23:43:93.02%:99:2.287E-21:44:3:2:1:43 1/1:46:18:7:11:20:90%:87:1.6758E-9:33:2:1:1:20 1/1:44:33:19:14:35:94.29%:99:5.9366E-18:34:2:1:1:36 1/1:45:43:21:22:44:95.56%:99:1.0412E-23:35:2:1:1:46 0/1:42:52:27:25:60:86.67%:99:3.1974E-26:43:7:3:4:61 1/1:41:29:12:17:30:96.67%:99:2.6212E-16:37:1:1:0:30 MTB_anc 2140682 . G A . PASS AC=14;AF=0.047;AN=300;ANN=A|missense_variant|MODERATE|Rv1893_Rv1893|gene1930|transcript|Transcript_gene1930|Coding|1/1|c.197G>A|p.Gly66Asp|197/219|197/219|66/72||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.2140682G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2140682G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:60:0%:99:1E0:42:60:21:39:61 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:36 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:20 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:36 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:41 0/0:0:0:0:0:21:0%:40:1E0:46:21:5:16:21 0/0:0:0:0:0:62:0%:99:1E0:41:62:29:33:62 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:4:14:18 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:5:18:24 0/0:0:0:0:0:56:0%:99:1E0:40:56:24:32:56 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:13:28:41 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:16:0%:29:1E0:49:16:10:6:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:5:14:19 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:16 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:9:24:33 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:21 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:34:0%:62:1E0:49:34:15:19:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:38:1:1:0:39:2.56%:62:5E-1:45:38:16:22:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:56:0%:99:1E0:43:56:30:26:58 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:31 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:25 0/0:0:0:0:0:16:0%:29:1E0:39:16:6:10:16 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:43 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:30 0/0:0:0:0:0:18:0%:32:1E0:41:18:5:13:18 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:37:1:0:1:29:3.45%:41:5E-1:40:27:15:12:29 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:38 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:16 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:42 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:35 0/0:0:0:0:0:32:0%:59:1E0:39:32:10:22:34 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:45 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:60:0%:99:1E0:41:60:26:34:60 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:28 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:18 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:5:16:21 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:39 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:29 0/0:0:0:0:0:25:0%:48:1E0:39:25:6:19:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:14:24:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:40 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:47:0%:89:1E0:39:47:20:27:47 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:27 0/0:37:1:0:1:26:3.85%:38:5E-1:40:25:9:16:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:30 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:3:20:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:29 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:30 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:30 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:36:0%:66:1E0:39:36:12:24:39 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:24 0/0:0:0:0:0:56:0%:99:1E0:39:56:28:28:57 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:44 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:34 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:34 0/0:0:0:0:0:49:0%:93:1E0:37:49:21:28:51 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:34 0/0:0:0:0:0:42:0%:77:1E0:37:42:14:28:43 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:38:0%:70:1E0:38:38:9:29:40 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:38:0%:70:1E0:38:38:18:20:40 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:27 0/0:0:0:0:0:51:0%:97:1E0:38:51:27:24:53 0/0:0:0:0:0:34:0%:62:1E0:35:34:10:24:37 0/0:0:0:0:0:21:0%:40:1E0:39:21:4:17:23 0/0:0:0:0:0:43:0%:82:1E0:39:43:17:26:43 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:35 0/0:0:0:0:0:36:0%:66:1E0:39:36:11:25:36 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:29 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:6:23:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:15:24:39 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:38:0%:70:1E0:37:38:20:18:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:45 0/0:0:0:0:0:42:0%:77:1E0:40:42:15:27:42 0/0:0:0:0:0:30:0%:55:1E0:38:30:8:22:30 MTB_anc 2145878 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|lppD_Rv1899c|gene1936|transcript|Transcript_gene1936|Coding|1/1|c.368C>T|p.Pro123Leu|368/1032|368/1032|123/343||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2145878G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2145878G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:44:35:12:23:36:97.22%:99:8.3613E-20:39:1:0:1:36 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:52:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:13:15:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:6:30:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:69 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:49:13:36:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 2146065 . C CGGCGGTCGCGGCGGGGCGGGCGGTAGAGGCGGCGACGGCGGGCAA . PASS AC=18;AF=0.060;AN=298;ANN=CGGCGGTCGCGGCGGGGCGGGCGGTAGAGGCGGCGACGGCGGGCAA|inframe_insertion|MODERATE|lppD_Rv1899c|gene1936|transcript|Transcript_gene1936|Coding|1/1|c.180_181insTTGCCCGCCGTCGCCGCCTCTACCGCCCGCCCCGCCGCGACCGCC|p.Ala60_Gly61insLeuProAlaValAlaAlaSerThrAlaArgProAlaAlaThrAla|180/1032|180/1032|60/343||,CGGCGGTCGCGGCGGGGCGGGCGGTAGAGGCGGCGACGGCGGGCAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2146065_2146066insGGCGGTCGCGGCGGGGCGGGCGGTAGAGGCGGCGACGGCGGGCAA||||||,CGGCGGTCGCGGCGGGGCGGGCGGTAGAGGCGGCGACGGCGGGCAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2146065_2146066insGGCGGTCGCGGCGGGGCGGGCGGTAGAGGCGGCGACGGCGGGCAA||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:57:10:4:6:31:32.26%:33:4.1251E-4:39:21:15:6:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:55:5:3:2:36:13.89%:30:2.6822E-2:40:30:17:13:36 0/0:60:2:1:1:12:16.67%:10:2.3913E-1:44:10:6:4:12 0/0:51:6:2:4:26:23.08%:14:1.1145E-2:39:19:14:5:26 0/0:41:3:0:3:15:20%:11:1.1207E-1:44:12:10:2:16 0/0:54:5:4:1:26:19.23%:17:2.531E-2:38:21:16:5:26 0/0:60:1:1:0:14:7.14%:17:5E-1:38:13:9:4:14 0/0:60:3:1:2:28:10.71%:28:1.1792E-1:42:24:18:6:28 0/1:60:7:5:2:26:26.92%:23:4.8126E-3:43:18:17:1:27 0/0:60:6:1:5:34:17.65%:23:1.2287E-2:40:28:21:7:34 0/1:60:11:6:5:37:29.73%:37:1.9879E-4:39:25:19:6:37 0/0:57:3:1:2:18:16.67%:14:1.1364E-1:37:14:6:8:18 0/0:60:2:0:2:25:8%:31:2.449E-1:38:23:15:8:25 0/0:52:3:1:2:20:15%:16:1.1538E-1:43:17:14:3:20 0/0:51:5:2:3:29:17.24%:22:2.5917E-2:39:24:16:8:29 0/0:58:2:1:1:20:10%:21:2.4359E-1:40:18:12:6:20 0/0:52:3:2:1:16:18.75%:9:1.1111E-1:38:11:7:4:16 0/0:48:2:2:0:15:13.33%:16:2.4138E-1:46:13:9:4:15 0/0:54:5:1:4:25:20%:17:2.5076E-2:36:20:13:7:25 0/0:57:4:1:3:16:25%:8:5.0612E-2:36:12:9:3:17 0/0:50:5:2:3:28:17.86%:19:2.5729E-2:38:23:17:6:28 0/0:58:3:0:3:15:20%:11:1.1207E-1:37:12:8:4:15 0/1:48:7:3:4:30:23.33%:22:5.0143E-3:39:20:12:8:31 0/0:54:5:3:2:29:17.24%:22:2.5917E-2:40:24:18:6:30 0/0:48:3:2:1:27:11.11%:25:1.1765E-1:39:23:15:8:27 0/0:60:2:2:0:11:18.18%:10:2.381E-1:40:9:5:4:11 0/0:60:2:2:0:23:8.7%:28:2.4444E-1:41:21:15:6:23 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:11 0/0:54:6:3:3:28:21.43%:16:1.1603E-2:39:22:16:6:29 0/1:56:8:4:4:28:28.57%:26:2.1337E-3:38:19:14:5:28 0/0:55:5:1:4:23:21.74%:12:2.4248E-2:37:17:10:7:24 0/0:50:3:2:1:16:18.75%:11:1.129E-1:44:13:8:5:16 0/0:37:1:0:1:17:5.88%:24:5E-1:40:16:14:2:17 0/0:60:5:2:3:19:26.32%:10:2.3166E-2:42:14:8:6:19 0/0:48:2:0:2:26:7.69%:27:2.4468E-1:38:22:12:10:26 0/1:54:8:4:4:28:28.57%:26:2.188E-3:39:20:14:6:28 0/1:54:14:8:6:42:33.33%:47:1.6028E-5:43:27:17:10:42 0/0:48:4:3:1:23:16.67%:15:5.3885E-2:41:18:14:4:24 0/0:57:4:3:1:29:13.79%:20:5.5222E-2:40:22:17:5:29 0/0:51:4:2:2:19:21.05%:13:5.251E-2:41:15:13:2:19 0/0:32:3:2:1:28:10.34%:25:1.1765E-1:40:23:18:5:30 0/0:48:4:2:2:17:23.53%:8:5.0612E-2:42:12:10:2:17 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 0/0:51:4:4:0:21:19.05%:15:5.3471E-2:41:17:10:7:21 0/0:60:2:2:0:35:5.71%:43:2.4627E-1:41:32:24:8:36 0/0:53:4:2:2:20:20%:13:5.3015E-2:41:16:11:5:20 0/0:50:6:3:3:32:18.75%:18:1.186E-2:37:24:15:9:33 0/0:60:3:2:1:23:13.04%:22:1.1667E-1:40:20:10:10:23 0/0:60:3:2:1:22:13.04%:16:1.1538E-1:39:17:10:7:23 0/0:60:2:0:2:9:22.22%:7:2.3529E-1:37:7:6:1:9 0/0:55:5:2:3:36:13.89%:30:2.6822E-2:40:30:16:14:36 0/0:60:3:2:1:15:20%:11:1.1207E-1:41:12:7:5:15 0/0:52:3:1:2:11:27.27%:7:1.0714E-1:42:8:5:3:11 0/0:38:1:0:1:16:6.25%:21:5E-1:38:15:10:5:17 0/0:56:6:1:5:28:21.43%:16:1.1603E-2:41:22:14:8:28 0/0:49:2:2:0:20:10%:21:2.4359E-1:41:18:15:3:20 0/0:56:6:2:4:21:28.57%:9:1.0344E-2:41:15:11:4:21 0/0:50:5:2:3:36:13.89%:30:2.6822E-2:40:30:19:11:37 0/1:57:9:6:3:31:29.03%:30:9.9376E-4:39:22:17:5:31 0/0:50:6:3:3:22:27.27%:9:1.057E-2:40:16:12:4:22 0/0:60:4:2:2:24:16.67%:18:5.4264E-2:37:19:14:5:25 0/0:47:6:4:2:28:20.69%:18:1.1736E-2:38:23:18:5:29 0/0:37:2:1:1:16:12.5%:16:2.4138E-1:46:13:9:4:16 0/0:60:3:1:2:21:14.29%:16:1.1538E-1:41:17:12:5:21 0/0:60:4:2:2:39:10.26%:34:5.7257E-2:38:32:25:7:40 0/1:51:7:2:5:32:21.88%:22:5.4182E-3:38:25:17:8:32 0/0:60:2:0:2:20:10%:21:2.4324E-1:41:17:15:2:21 0/0:60:6:3:3:21:28.57%:7:1.0098E-2:44:14:9:5:22 0/0:60:1:0:1:10:10%:11:5E-1:43:8:3:5:10 0/0:55:5:1:4:25:20%:14:2.4823E-2:41:19:9:10:25 0/0:48:2:0:2:14:14.29%:13:2.4E-1:41:11:9:2:15 0/0:60:2:2:0:17:11.76%:15:2.4194E-1:42:14:6:8:17 0/0:60:6:3:3:28:21.43%:16:1.1603E-2:40:22:15:7:28 0/1:56:9:2:7:35:25.71%:29:1.0644E-3:40:25:18:7:37 0/0:44:4:1:3:28:14.29%:23:5.5494E-2:43:23:18:5:28 0/0:48:4:2:2:30:13.33%:26:5.5981E-2:39:25:15:10:30 0/0:51:6:3:3:31:19.35%:20:1.1977E-2:45:25:19:6:31 0/0:60:3:3:0:24:12.5%:22:1.1702E-1:37:21:14:7:24 0/0:53:4:1:3:15:26.67%:6:4.8889E-2:43:10:6:4:15 0/0:44:3:0:3:13:23.08%:9:1.1E-1:38:10:8:2:13 0/0:54:5:3:2:26:19.23%:17:2.5076E-2:38:20:13:7:26 0/0:60:3:1:2:26:11.54%:22:1.1667E-1:38:20:8:12:26 0/0:52:5:1:4:19:26.32%:8:2.2239E-2:41:12:9:3:19 0/0:60:4:1:3:22:18.18%:15:5.3885E-2:39:18:14:4:22 0/1:51:7:4:3:22:31.82%:23:4.4505E-3:39:15:9:6:23 0/1:58:8:4:4:23:34.78%:27:1.8791E-3:40:15:11:4:24 0/0:0:0:0:0:8:0%:14:1E0:35:8:7:1:8 0/0:48:4:3:1:19:20%:13:5.251E-2:45:15:13:2:20 0/0:60:4:3:1:21:19.05%:15:5.3471E-2:37:17:13:4:22 0/0:54:4:1:3:28:13.79%:23:5.5494E-2:42:23:15:8:30 0/0:36:3:3:0:19:15.79%:17:1.1486E-1:44:16:8:8:19 0/1:56:8:4:4:34:23.53%:26:2.2875E-3:40:22:18:4:34 0/0:58:6:4:2:27:22.22%:13:1.1309E-2:42:20:15:5:27 0/0:53:4:1:3:24:16.67%:18:5.461E-2:39:20:11:9:25 0/0:51:3:1:2:18:16.67%:14:1.1364E-1:38:14:10:4:18 0/0:36:3:1:2:20:14.29%:19:1.1585E-1:39:18:13:5:23 0/0:55:5:3:2:33:15.15%:24:2.6412E-2:39:27:17:10:37 0/0:48:2:2:0:28:7.14%:30:2.451E-1:39:24:17:7:29 0/0:60:3:1:2:23:13.04%:19:1.1628E-1:40:19:14:5:24 0/1:53:9:2:7:30:30%:30:9.678E-4:38:21:11:10:31 0/0:55:5:2:3:28:17.86%:17:2.531E-2:39:21:16:5:28 0/0:51:6:1:5:22:27.27%:9:1.057E-2:40:16:8:8:23 0/0:49:3:2:1:20:15%:17:1.1486E-1:42:16:13:3:22 0/0:48:4:1:3:20:20%:13:5.3015E-2:39:16:12:4:20 0/1:56:7:3:4:24:29.17%:23:4.5803E-3:39:16:12:4:24 0/1:53:9:5:4:38:23.08%:29:1.0644E-3:38:25:17:8:39 0/0:54:6:4:2:26:23.08%:11:1.0968E-2:38:18:11:7:26 0/0:50:6:2:4:22:27.27%:9:1.057E-2:41:16:13:3:23 0/0:52:5:2:3:31:16.13%:19:2.5729E-2:44:23:18:5:33 0/0:56:6:2:4:30:20%:16:1.1603E-2:41:22:12:10:30 0/0:45:4:1:3:29:13.79%:23:5.5746E-2:41:24:17:7:29 0/0:47:2:0:2:20:10%:21:2.4359E-1:36:18:14:4:24 0/0:60:2:0:2:24:8.33%:28:2.4444E-1:39:21:13:8:24 0/0:49:5:0:5:23:21.74%:14:2.4548E-2:38:18:13:5:25 0/0:50:5:1:4:30:16.13%:22:2.5917E-2:38:24:20:4:31 0/0:48:2:0:2:16:12.5%:15:2.4194E-1:40:14:12:2:17 0/0:58:5:2:3:25:20%:17:2.5076E-2:37:20:17:3:25 0/0:60:2:0:2:23:8.7%:25:2.439E-1:39:19:12:7:23 0/1:46:8:5:3:32:25%:26:2.3764E-3:37:24:18:6:33 0/0:55:5:0:5:31:16.13%:24:2.6257E-2:39:26:20:6:32 0/0:48:4:1:3:26:15.38%:20:5.5222E-2:39:22:13:9:26 0/0:60:2:1:1:14:14.29%:12:2.4074E-1:44:12:6:6:14 0/0:37:2:1:1:28:6.9%:31:2.449E-1:37:23:14:9:29 0/0:60:1:1:0:22:4.55%:31:5E-1:39:21:16:5:23 0/0:52:3:1:2:20:15%:17:1.1486E-1:40:16:8:8:21 0/0:38:1:0:1:18:5.56%:24:5E-1:40:17:15:2:21 0/0:50:5:2:3:21:23.81%:12:2.3921E-2:38:16:14:2:22 0/0:52:3:1:2:16:18.75%:11:1.129E-1:38:13:7:6:17 0/0:47:5:3:2:33:15.15%:24:2.6412E-2:38:27:17:10:33 0/0:48:2:0:2:13:15.38%:10:2.3913E-1:39:10:7:3:13 0/0:54:2:2:0:19:10.53%:18:2.4286E-1:37:16:8:8:20 0/0:60:2:0:2:12:16.67%:10:2.3913E-1:34:10:6:4:14 0/0:52:3:0:3:17:17.65%:14:1.1364E-1:38:14:11:3:17 0/0:48:2:1:1:14:14.29%:13:2.4E-1:37:11:7:4:14 0/0:60:1:0:1:13:7.69%:18:5E-1:39:12:11:1:13 0/0:38:1:0:1:39:2.56%:58:5E-1:37:37:24:13:40 0/0:60:4:1:3:24:16.67%:18:5.4264E-2:38:19:16:3:25 0/0:60:4:1:3:27:14.81%:20:5.5222E-2:40:22:18:4:28 0/0:52:6:4:2:23:26.09%:9:1.057E-2:38:16:13:3:23 0/0:54:4:1:3:25:16%:21:5.4928E-2:40:21:17:4:25 0/0:48:3:1:2:16:18.75%:11:1.1207E-1:37:12:10:2:16 0/0:50:4:2:2:17:23.53%:11:5.132E-2:36:13:8:5:17 0/0:52:3:0:3:17:17.65%:11:1.1207E-1:41:12:6:6:17 0/0:46:4:1:3:18:22.22%:11:5.132E-2:40:13:8:5:18 0/0:57:3:2:1:14:21.43%:9:1.1111E-1:39:11:7:4:14 0/0:46:4:2:2:22:18.18%:15:5.3885E-2:39:18:12:6:22 0/0:54:4:3:1:31:12.9%:26:5.5981E-2:40:25:17:8:33 0/1:52:7:3:4:30:23.33%:22:5.0143E-3:41:20:9:11:31 0/0:60:1:0:1:16:6.25%:21:5E-1:38:15:12:3:16 MTB_anc 2151678 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|aao_Rv1905c|gene1942|transcript|Transcript_gene1942|Coding|1/1|c.718A>C|p.Thr240Pro|718/963|718/963|240/320||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2151678T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2151678T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:52:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:14:14:29:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:45:45:22:23:46:97.83%:99:9.6314E-27:0:0:0:0:47 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:60:28:32:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:22:11:11:23:95.65%:99:2.9149E-12:37:1:0:1:24 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:78:40:38:78:100%:99:1.7165E-46:0:0:0:0:79 1/1:44:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:51:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:49:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:15:17:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:41:28:15:13:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:32:13:19:33:96.97%:99:4.7095E-18:29:1:0:1:36 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:32:15:17:33:96.97%:99:4.7095E-18:60:1:1:0:33 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:45:21:24:46:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:42:31:16:15:33:93.94%:99:8.2416E-17:37:2:1:1:34 1/1:37:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:31:15:16:32:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 MTB_anc 2151984 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|stop_gained|HIGH|aao_Rv1905c|gene1942|transcript|Transcript_gene1942|Coding|1/1|c.412C>T|p.Gln138*|412/963|412/963|138/320||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2151984G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2151984G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:43:52:29:23:52 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:24 0/0:0:0:0:0:61:0%:99:1E0:46:61:34:27:61 0/0:0:0:0:0:38:0%:70:1E0:46:38:13:25:38 0/0:0:0:0:0:21:0%:40:1E0:44:21:5:16:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:25 0/0:0:0:0:0:30:0%:55:1E0:51:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:28 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:31 0/0:0:0:0:0:29:0%:55:1E0:53:29:16:13:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:14:25:40 0/0:0:0:0:0:13:0%:25:1E0:51:13:3:10:13 0/0:0:0:0:0:52:0%:96:1E0:45:52:23:29:52 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:33 0/0:0:0:0:0:54:0%:99:1E0:45:54:23:31:54 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:46:0%:85:1E0:46:46:22:24:46 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:10:0%:17:1E0:44:10:4:6:10 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:32 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:27 0/0:0:0:0:0:37:0%:70:1E0:49:37:16:21:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:31:12:43 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:56:0%:99:1E0:44:56:32:24:56 0/1:48:21:8:13:28:75%:90:8.7917E-10:50:7:5:2:28 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:46 0/0:60:1:1:0:37:2.7%:59:5E-1:46:36:14:22:38 0/0:60:1:0:1:19:5.26%:28:5E-1:45:18:11:7:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:43 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:45 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:24:0%:44:1E0:54:24:13:11:24 0/0:0:0:0:0:50:0%:92:1E0:44:50:29:21:54 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:9:21:30 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:27 0/0:0:0:0:0:42:0%:77:1E0:46:42:25:17:43 0/0:0:0:0:0:49:0%:93:1E0:50:49:31:18:49 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:25:9:34 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:35:0%:67:1E0:47:35:25:10:36 0/0:0:0:0:0:53:0%:99:1E0:46:53:30:23:53 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:34 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:39:0%:74:1E0:50:39:20:19:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:29 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:38:1:1:0:31:3.23%:48:5E-1:46:30:12:18:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:51:0%:97:1E0:47:51:32:19:51 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:36:0%:66:1E0:47:36:27:9:36 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:48 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:16:5:21 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:33 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:37:1:0:1:28:3.57%:41:5E-1:42:27:13:14:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:15 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:29 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:25 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:39:1:1:0:36:2.78%:55:5E-1:44:35:19:16:38 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:42 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:24 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:32 0/0:0:0:0:0:18:0%:32:1E0:45:18:5:13:19 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:46 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:14:0%:25:1E0:44:14:9:5:14 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:34 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:45 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:49 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:41 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:28 0/0:0:0:0:0:33:0%:63:1E0:38:33:12:21:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:58:0%:99:1E0:40:58:28:30:59 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 0/0:60:1:1:0:44:2.27%:69:5E-1:41:43:25:18:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:26 0/0:0:0:0:0:44:0%:81:1E0:42:44:27:17:44 0/0:0:0:0:0:64:0%:99:1E0:43:64:33:31:64 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 MTB_anc 2154724 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|katG_Rv1908c|gene1945|transcript|Transcript_gene1945|Coding|1/1|c.1388T>G|p.Leu463Arg|1388/2223|1388/2223|463/740||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2154724A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|isoniazid|||n.2154724A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2154724A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:53:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:19:9:10:20:95%:98:1.5234E-10:60:1:0:1:20 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:49:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:52:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:24:10:14:25:96%:99:2.0568E-13:39:1:0:1:26 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:28:13:15:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:33:15:18:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:54:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:37:13:24:38:97.37%:99:5.6582E-21:35:1:0:1:38 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:50:21:29:51:98.04%:99:9.9117E-30:0:0:0:0:51 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:30:13:17:31:96.77%:99:6.8754E-17:37:1:0:1:32 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:53:30:23:55:96.36%:99:1.6199E-29:38:2:1:1:56 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 2154827 . GC G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|frameshift_variant|HIGH|katG_Rv1908c|gene1945|transcript|Transcript_gene1945|Coding|1/1|c.1284delG|p.Pro429fs|1284/2223|1284/2223|428/740||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2154828delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|isoniazid|||n.2154828delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2154828delC||||||;HET=0;LOF=(katG_Rv1908c|gene1945|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:52 0/0:0:0:0:0:19:0%:37:1E0:51:19:9:10:19 0/0:38:1:0:1:54:1.85%:87:5E-1:45:53:22:31:54 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:20 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:38 0/0:0:0:0:0:40:0%:74:1E0:47:40:13:27:40 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:15 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:47:34:11:23:34 0/0:0:0:0:0:53:0%:99:1E0:43:53:22:31:56 0/0:0:0:0:0:15:0%:29:1E0:40:15:7:8:16 1/1:40:49:22:27:48:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:21:10:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:19 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:61:0%:99:1E0:44:61:29:32:62 0/0:0:0:0:0:32:0%:59:1E0:46:32:11:21:32 0/0:0:0:0:0:45:0%:85:1E0:47:45:16:29:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:12:0%:21:1E0:46:12:5:7:12 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:51:28:11:17:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:8:18:28 0/0:0:0:0:0:32:0%:59:1E0:48:32:20:12:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:34 0/0:0:0:0:0:59:0%:99:1E0:48:59:27:32:59 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:38:1:1:0:25:4%:38:5E-1:38:24:11:13:25 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:44 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:37 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:40 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:18 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:36 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:51:0%:97:1E0:46:51:27:24:52 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:52:0%:96:1E0:42:52:23:29:53 0/0:0:0:0:0:39:0%:74:1E0:47:39:23:16:39 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:58:0%:99:1E0:47:58:26:32:61 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:38 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:39 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:60:1:1:0:18:5.56%:24:5E-1:45:17:3:14:18 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:36 0/0:0:0:0:0:24:0%:44:1E0:51:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:49:28:19:9:28 0/0:0:0:0:0:43:0%:82:1E0:40:43:17:26:45 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:24:11:35 0/0:0:0:0:0:40:0%:74:1E0:50:40:17:23:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:37 0/0:0:0:0:0:53:0%:99:1E0:43:53:22:31:55 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:52:0%:96:1E0:41:52:21:31:52 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:21 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:33:0%:63:1E0:50:33:13:20:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:30 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:51 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:30 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:63:0%:99:1E0:42:63:28:35:63 0/0:0:0:0:0:58:0%:99:1E0:41:58:24:34:59 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:27 0/0:0:0:0:0:49:0%:93:1E0:39:49:26:23:53 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:50 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:48 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:36 0/0:0:0:0:0:51:0%:97:1E0:41:51:30:21:53 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:44 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:37 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:44 0/0:0:0:0:0:39:0%:74:1E0:39:39:24:15:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:42 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:62:0%:99:1E0:39:62:32:30:63 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:48 0/0:0:0:0:0:51:0%:97:1E0:40:51:27:24:51 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:60:1:1:0:39:2.56%:62:5E-1:42:38:21:17:40 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:46 0/0:0:0:0:0:54:0%:99:1E0:42:54:33:21:56 0/0:0:0:0:0:42:0%:77:1E0:41:42:26:16:43 MTB_anc 2156868 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv1910c_Rv1910c|gene1947|transcript|Transcript_gene1947|Coding|1/1|c.432A>C|p.Gly144Gly|432/594|432/594|144/197||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2156868T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2156868T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:40:18:22:41:97.56%:99:9.8874E-23:54:1:1:0:42 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:43:22:21:44:97.73%:99:1.7144E-24:31:1:0:1:44 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:59:28:31:60:98.33%:99:6.3137E-34:60:1:1:0:61 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:36:19:17:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:30:16:14:31:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:63:29:34:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:17:17:35:97.14%:99:3.2089E-19:60:1:1:0:36 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:31:12:19:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:42:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:32:11:21:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 2158109 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|fadB5_Rv1912c|gene1949|transcript|Transcript_gene1949|Coding|1/1|c.983G>A|p.Gly328Asp|983/1005|983/1005|328/334||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2158109C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2158109C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:69:29:40:69:100%:99:4.233E-41:0:0:0:0:70 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:34:14:20:35:97.14%:99:3.2089E-19:38:1:0:1:35 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:70:35:35:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:54:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 MTB_anc 2158807 . G T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|stop_gained|HIGH|fadB5_Rv1912c|gene1949|transcript|Transcript_gene1949|Coding|1/1|c.285C>A|p.Tyr95*|285/1005|285/1005|95/334||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2158807G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2158807G>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 0/0:0:0:0:0:46:0%:85:1E0:45:46:19:27:47 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:19:0%:37:1E0:50:19:12:7:19 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:37 0/0:0:0:0:0:23:0%:44:1E0:55:23:8:15:23 0/0:0:0:0:0:48:0%:89:1E0:44:48:32:16:48 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:17 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:40 0/0:0:0:0:0:56:0%:99:1E0:42:56:30:26:56 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:16:0%:29:1E0:51:16:8:8:16 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:40 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:34 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:0:0:0:0:33:0%:63:1E0:40:33:10:23:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:41 0/0:0:0:0:0:56:0%:99:1E0:45:56:25:31:56 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:44:0%:81:1E0:44:44:27:17:45 0/0:0:0:0:0:46:0%:85:1E0:40:46:19:27:47 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:41:0%:78:1E0:46:41:27:14:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:10:26:36 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:45 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:37 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:18 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:26:15:43 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:36 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:28:13:43 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:17:7:25 0/0:0:0:0:0:41:0%:78:1E0:46:41:18:23:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/1:42:28:11:17:36:77.78%:99:4.0051E-13:40:8:5:3:36 0/0:0:0:0:0:13:0%:25:1E0:47:13:6:7:13 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:22 0/0:0:0:0:0:37:0%:70:1E0:49:37:15:22:37 0/0:0:0:0:0:22:0%:40:1E0:54:22:12:10:22 0/0:0:0:0:0:16:0%:29:1E0:48:16:10:6:16 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:45 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:57:0%:99:1E0:41:57:25:32:57 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:15:28:44 0/0:39:1:0:1:36:2.78%:55:5E-1:44:35:15:20:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:18 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:50:0%:92:1E0:42:50:23:27:50 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:21 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:21:8:29 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:38 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:24 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:17 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:27 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:15:26:41 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:32 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:36 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:21 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:47 0/0:0:0:0:0:43:0%:82:1E0:39:43:18:25:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:15:3:18 0/0:0:0:0:0:53:0%:99:1E0:39:53:24:29:54 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:38:35:21:14:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:0:0:0:0:41:0%:78:1E0:37:41:24:17:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:37 0/0:0:0:0:0:35:0%:67:1E0:38:35:20:15:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:16:27:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:34 0/0:0:0:0:0:44:0%:81:1E0:37:44:25:19:46 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:50:0%:92:1E0:39:50:22:28:50 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:46 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:47 0/0:0:0:0:0:49:0%:93:1E0:41:49:25:24:49 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:13:24:38 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:35 MTB_anc 2160568 . G A . PASS AC=10;AF=0.033;AN=300;ANN=A|missense_variant|MODERATE|aceAa_Rv1915|gene1952|transcript|Transcript_gene1952|Coding|1/1|c.106G>A|p.Gly36Arg|106/1104|106/1104|36/367||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2160568G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2160568G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:17:0%:33:1E0:54:17:8:9:18 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:33 0/0:0:0:0:0:34:0%:62:1E0:51:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:37:0%:70:1E0:48:37:24:13:38 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:49:33:13:20:34 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:24 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:54 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:21 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:19 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:51:0%:97:1E0:47:51:26:25:52 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:49:25:6:19:26 0/0:37:1:1:0:26:3.85%:38:5E-1:49:25:8:17:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 1/1:47:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:19 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:56:0%:99:1E0:46:56:21:35:57 0/0:0:0:0:0:41:0%:78:1E0:48:41:20:21:41 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:34:1:1:0:39:2.56%:62:5E-1:44:38:18:20:39 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:18 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:53:0%:99:1E0:42:53:31:22:54 0/0:0:0:0:0:49:0%:93:1E0:45:49:27:22:50 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:41 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:30 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:41 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:35 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:42:0%:77:1E0:42:42:14:28:42 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:19:8:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:14:27:41 0/0:0:0:0:0:52:0%:96:1E0:45:52:22:30:53 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:24 0/0:0:0:0:0:37:0%:70:1E0:48:37:21:16:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:28:0%:51:1E0:51:28:13:15:28 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:9:22:32 0/0:0:0:0:0:17:0%:33:1E0:44:17:5:12:18 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:33 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:50:26:11:15:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:23 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:8:20:28 0/0:0:0:0:0:41:0%:78:1E0:42:41:14:27:41 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:36 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:56:0%:99:1E0:43:56:22:34:57 0/0:0:0:0:0:50:0%:92:1E0:41:50:21:29:50 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:19 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:39 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:39 0/0:0:0:0:0:37:0%:70:1E0:40:37:25:12:37 0/0:0:0:0:0:50:0%:92:1E0:41:50:21:29:51 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:33:1:0:1:32:3.12%:48:5E-1:40:31:16:15:32 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:62:0%:99:1E0:39:62:33:29:65 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:34 0/0:33:1:0:1:42:2.38%:66:5E-1:41:41:23:18:42 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:11:24:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:61:0%:99:1E0:44:61:16:45:61 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:49 0/0:0:0:0:0:35:0%:67:1E0:45:35:7:28:35 MTB_anc 2161343 . G GT . PASS AC=298;AF=0.993;AN=300;ANN=GT|frameshift_variant|HIGH|aceAa_Rv1915|gene1952|transcript|Transcript_gene1952|Coding|1/1|c.885dupT|p.Thr296fs|886/1104|886/1104|296/367||INFO_REALIGN_3_PRIME,GT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2161343_2161344insT||||||,GT|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2161343_2161344insT||||||;LOF=(aceAa_Rv1915|gene1952|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:52:24:28:52:98.11%:99:8.609E-30:36:1:0:1:53 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:43:21:22:43:97.73%:99:1.7144E-24:36:1:1:0:44 1/1:48:33:15:18:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:38:19:19:40:95%:99:8.0088E-21:33:2:1:1:40 1/1:46:27:20:7:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:46:39:23:16:39:97.5%:99:3.8137E-22:32:1:0:1:40 1/1:52:19:8:11:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:47:56:35:21:58:96.55%:99:2.8822E-31:34:2:1:1:58 1/1:49:20:10:10:21:95.24%:99:4.0873E-11:32:1:1:0:21 1/1:47:41:25:16:42:97.62%:99:2.5612E-23:32:1:1:0:42 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:15:14:32:90.62%:99:3.5714E-15:43:3:1:2:32 1/1:45:24:14:10:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:25:15:10:26:96.15%:99:5.4444E-14:32:1:1:0:26 1/1:44:42:16:26:45:93.33%:99:1.6658E-22:33:3:2:1:45 1/1:49:25:12:13:26:96.15%:99:5.4444E-14:33:1:1:0:26 1/1:47:29:13:16:30:96.67%:99:2.6212E-16:38:1:1:0:30 1/1:45:41:23:18:42:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:46:26:14:12:28:92.86%:99:5.6872E-14:60:2:2:0:28 1/1:44:29:13:16:31:93.55%:99:1.1344E-15:35:2:1:1:31 1/1:44:26:10:16:27:92.86%:99:5.6872E-14:38:2:2:0:28 1/1:46:37:20:17:40:92.5%:99:1.1479E-19:33:3:1:2:40 1/1:47:34:20:14:35:97.14%:99:3.2089E-19:37:1:0:1:35 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:44:21:23:46:95.65%:99:2.7459E-24:33:2:0:2:46 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:28:11:17:29:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 0/1:43:40:23:17:43:88.89%:99:2.0407E-20:46:5:4:1:45 1/1:45:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:40:26:14:42:93.02%:99:2.287E-21:42:3:2:1:43 1/1:48:43:22:21:46:93.48%:99:4.485E-23:35:3:3:0:46 1/1:48:54:25:29:55:98.18%:99:5.6837E-31:34:1:0:1:55 0/1:42:31:17:14:35:88.57%:99:7.3316E-16:33:4:3:1:35 1/1:47:40:23:17:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:29:11:18:32:90.62%:99:3.5714E-15:43:3:1:2:32 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:13:20:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:18:27:46:97.83%:99:1.1441E-25:34:1:1:0:46 1/1:42:30:14:16:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:42:37:22:15:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:44:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:37:22:15:39:94.87%:99:3.0128E-20:35:2:0:2:40 1/1:51:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:45:22:23:45:97.83%:99:1.1441E-25:33:1:1:0:46 1/1:48:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:13:14:30:90%:99:4.6134E-14:44:3:1:2:30 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:39:23:16:41:95.12%:99:2.1258E-21:35:2:1:1:41 1/1:45:28:14:14:29:96.55%:99:9.9776E-16:35:1:0:1:29 1/1:43:53:25:28:56:94.64%:99:8.323E-29:43:3:1:2:56 1/1:47:32:21:11:33:96.97%:99:4.7095E-18:39:1:0:1:33 1/1:45:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:29:12:17:32:90.62%:99:3.5714E-15:42:3:2:1:32 1/1:43:52:27:25:53:98.11%:99:8.609E-30:34:1:1:0:53 1/1:48:24:13:11:25:96%:99:2.0568E-13:34:1:0:1:25 1/1:45:41:18:23:42:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:47:51:26:25:51:98.08%:99:3.3479E-29:33:1:0:1:52 1/1:46:24:12:12:26:92.31%:99:7.6222E-13:32:2:2:0:26 1/1:47:30:18:12:32:93.75%:99:3.0612E-16:47:2:1:1:32 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:16:4:12:17:94.12%:81:7.7134E-9:60:1:1:0:17 1/1:49:31:17:14:33:93.94%:99:8.2416E-17:28:2:2:0:33 1/1:46:32:19:13:32:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:39:17:22:41:95.12%:99:2.1258E-21:44:2:1:1:41 1/1:40:33:16:17:36:91.67%:99:2.0653E-17:33:3:1:2:36 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:19:12:7:20:95%:98:1.5234E-10:34:1:0:1:20 1/1:48:27:12:15:28:96.43%:99:3.7915E-15:32:1:1:0:28 1/1:40:33:13:20:34:94.29%:99:5.9366E-18:33:2:0:2:35 1/1:43:38:16:22:38:95%:99:1.4697E-21:60:1:1:0:39 1/1:47:35:16:19:36:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:45:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:24:13:11:22:100%:99:3.101E-14:0:0:0:0:24 1/1:42:35:16:19:35:97.22%:99:8.3613E-20:33:1:1:0:36 1/1:43:37:13:24:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:52:33:19:53:98.11%:99:8.609E-30:33:1:0:1:53 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:16:20:37:97.3%:99:2.1762E-20:34:1:1:0:37 1/1:52:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:45:17:28:46:97.83%:99:1.1441E-25:34:1:0:1:46 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:48:26:22:50:96%:99:1.3143E-26:34:2:1:1:50 1/1:43:26:16:10:26:96.3%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:19:19:41:92.68%:99:3.1178E-20:32:3:2:1:41 1/1:44:35:17:18:37:94.59%:99:4.2437E-19:35:2:2:0:37 1/1:41:37:24:13:38:97.37%:99:5.6582E-21:26:1:1:0:38 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:23:13:10:25:92%:99:2.7767E-12:33:2:1:1:25 1/1:44:19:9:10:19:95%:98:1.5234E-10:34:1:1:0:20 1/1:43:31:18:13:33:93.94%:99:8.2416E-17:32:2:1:1:33 1/1:43:27:11:16:28:96.43%:99:3.7915E-15:32:1:1:0:28 1/1:42:19:9:10:20:95%:98:1.5234E-10:34:1:0:1:21 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:18:16:37:91.89%:99:5.6582E-18:33:3:1:2:37 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:8:24:34:94.12%:99:2.2142E-17:46:2:1:1:34 1/1:42:30:12:18:32:93.75%:99:3.0612E-16:35:2:0:2:32 1/1:44:30:15:15:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:18:8:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:47:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:50:23:27:51:96.15%:99:9.0394E-28:33:2:0:2:52 1/1:43:19:9:10:20:95%:98:1.5234E-10:33:1:1:0:20 1/1:47:35:19:16:38:92.11%:99:1.5466E-18:32:3:3:0:38 1/1:38:27:14:13:28:93.1%:99:3.7915E-15:29:1:0:1:28 1/1:42:61:34:27:62:98.39%:99:4.1425E-35:34:1:1:0:62 1/1:41:55:32:23:56:98.21%:99:1.4593E-31:39:1:1:0:56 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:15:11:27:92.86%:99:5.6872E-14:33:2:0:2:28 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:45:18:27:46:97.83%:99:1.1441E-25:33:1:0:1:46 1/1:40:45:29:16:47:95.74%:99:7.2338E-25:33:2:1:1:48 1/1:41:40:26:14:42:95.24%:99:5.6346E-22:28:2:1:1:42 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:17:19:38:92.31%:99:4.2179E-19:34:3:0:3:39 1/1:43:42:17:25:45:93.33%:99:1.6658E-22:34:3:1:2:45 1/1:42:40:17:23:40:97.56%:99:9.8874E-23:31:1:1:0:41 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:34:17:17:35:91.89%:99:5.6582E-18:43:3:1:2:37 1/1:40:46:25:21:47:95.83%:99:1.9036E-25:33:2:0:2:48 1/1:40:36:18:18:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:65:34:31:68:94.2%:99:9.6073E-36:33:3:1:2:69 1/1:46:47:22:25:49:95.92%:99:5.0044E-26:47:2:0:2:49 1/1:43:38:22:16:39:97.44%:99:1.4697E-21:35:1:1:0:39 1/1:42:48:27:21:49:97.96%:99:1.9625E-27:34:1:0:1:49 1/1:43:34:21:13:35:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:18:12:31:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:56:35:21:58:96.55%:99:2.8822E-31:33:2:1:1:58 1/1:41:53:23:30:54:96.36%:99:1.6199E-29:46:2:1:1:55 1/1:44:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 2163375 . T C . PASS AC=137;AF=0.457;AN=300;ANN=C|missense_variant|MODERATE|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3937A>G|p.Asn1313Asp|3937/4380|3937/4380|1313/1459||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163375T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163375T>C||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:13:10:3:28:46.43%:47:1.9812E-5:45:15:8:7:30 0/1:47:8:6:2:26:30.77%:26:2.076E-3:48:18:8:10:28 0/1:40:17:8:9:60:28.33%:56:2.0389E-6:46:43:21:22:66 0/1:42:7:4:3:27:25.93%:22:5.0143E-3:47:20:7:13:28 0/1:42:15:7:8:33:45.45%:54:3.8647E-6:43:18:11:7:34 0/1:46:9:6:3:27:33.33%:30:8.8132E-4:46:18:9:9:32 0/1:46:10:3:7:33:30.3%:33:4.3872E-4:45:23:12:11:36 0/1:41:8:6:2:29:27.59%:26:2.2392E-3:47:21:9:12:31 0/1:47:20:11:9:53:37.74%:69:1.0405E-7:47:33:15:18:57 0/1:41:12:9:3:34:35.29%:41:7.5302E-5:49:22:7:15:36 0/1:48:14:10:4:35:41.18%:49:1.1295E-5:45:20:15:5:40 0/1:41:13:9:4:41:31.71%:44:3.9497E-5:46:28:12:16:43 0/1:48:12:11:1:32:37.5%:41:6.5329E-5:48:19:8:11:33 0/1:40:21:13:8:53:39.62%:73:3.9927E-8:46:32:17:15:55 0/0:42:3:3:0:28:10.71%:28:1.1818E-1:43:25:12:13:31 0/1:39:11:8:3:27:40.74%:38:1.362E-4:44:16:5:11:30 0/1:43:12:6:6:32:37.5%:41:6.8751E-5:46:20:7:13:33 0/0:47:5:2:3:12:41.67%:3:1.8634E-2:44:7:5:2:14 0/1:37:7:4:3:19:36.84%:23:3.9926E-3:40:12:10:2:20 0/1:41:9:4:5:27:33.33%:30:8.8132E-4:52:18:10:8:29 0/0:37:5:3:2:20:25%:10:2.3562E-2:47:15:8:7:20 0/1:40:15:12:3:44:34.09%:51:7.2456E-6:40:29:14:15:53 0/1:43:11:7:4:27:40.74%:38:1.362E-4:44:16:8:8:29 0/1:42:16:12:4:40:40%:56:2.3315E-6:43:24:11:13:46 0/1:49:7:3:4:29:24.14%:22:5.1909E-3:42:22:9:13:33 0/1:42:13:6:7:44:29.55%:43:4.324E-5:44:31:12:19:47 0/1:45:10:5:5:18:55.56%:37:1.7215E-4:35:8:5:3:21 0/1:45:9:3:6:31:29.03%:30:9.9376E-4:43:22:15:7:32 0/0:43:5:3:2:24:20.83%:14:2.4823E-2:40:19:6:13:30 0/1:41:14:7:7:35:40%:49:1.2005E-5:40:21:13:8:37 0/1:41:13:9:4:39:33.33%:44:3.6837E-5:44:26:13:13:42 0/1:45:12:5:7:40:30%:40:9.2733E-5:45:28:18:10:43 0/1:45:13:4:9:34:38.24%:45:2.9583E-5:51:21:10:11:36 0/1:43:8:6:2:24:33.33%:27:1.949E-3:45:16:10:6:28 0/1:39:13:8:5:37:35.14%:44:3.404E-5:49:24:13:11:39 0/1:36:15:9:6:42:35.71%:51:6.6622E-6:47:27:16:11:45 0/1:42:17:11:6:40:42.5%:60:8.743E-7:42:23:17:6:44 0/1:44:21:13:8:65:32.31%:71:6.9273E-8:45:44:28:16:67 0/1:41:19:11:8:48:39.58%:66:2.0555E-7:44:29:22:7:57 0/1:40:10:5:5:26:38.46%:34:3.3576E-4:50:16:7:9:27 0/1:40:13:5:8:43:30.23%:43:4.2025E-5:40:30:17:13:49 0/1:42:11:5:6:50:22%:35:2.6374E-4:47:39:24:15:57 0/1:39:17:11:6:34:50%:62:5.1914E-7:48:17:12:5:36 0/1:36:8:3:5:30:26.67%:26:2.2875E-3:45:22:11:11:34 0/1:40:21:12:9:46:45.65%:76:2.4256E-8:45:25:14:11:49 0/1:38:12:8:4:42:28.57%:40:9.7866E-5:47:30:16:14:48 0/1:40:10:4:6:28:35.71%:34:3.6855E-4:47:18:12:6:34 0/1:43:18:11:7:45:40%:63:4.5278E-7:45:27:12:15:55 0/1:41:15:6:9:56:26.79%:49:1.0354E-5:43:41:19:22:64 0/1:40:14:7:7:43:32.56%:47:1.727E-5:44:29:14:15:46 0/1:41:7:4:3:22:31.82%:23:4.4505E-3:43:15:10:5:25 0/1:42:12:10:2:43:27.91%:39:1.0032E-4:40:31:16:15:49 0/0:43:4:2:2:22:18.18%:15:5.3885E-2:45:18:11:7:23 0/1:43:10:6:4:28:35.71%:34:3.6855E-4:45:18:8:10:30 0/1:39:9:5:4:30:30%:30:9.678E-4:40:21:10:11:33 0/1:42:11:8:3:40:27.5%:36:2.2064E-4:46:29:15:14:49 0/1:39:17:10:7:44:38.64%:59:1.1194E-6:42:27:13:14:51 0/1:42:10:6:4:26:38.46%:34:3.3576E-4:42:16:9:7:33 0/1:38:19:12:7:45:42.22%:67:1.6979E-7:41:26:10:16:48 0/1:44:16:10:6:43:37.21%:55:2.7433E-6:48:27:13:14:48 0/1:43:10:7:3:30:33.33%:33:3.9851E-4:41:20:13:7:33 0/1:39:7:6:1:28:25%:22:5.1054E-3:42:21:11:10:32 0/1:39:18:11:7:50:36%:62:5.8874E-7:41:32:19:13:58 0/1:41:10:4:6:31:32.26%:33:4.1251E-4:45:21:14:7:34 0/1:38:8:5:3:48:16.67%:25:2.8457E-3:47:40:21:19:51 0/1:43:9:6:3:53:16.98%:28:1.3495E-3:44:44:29:15:59 0/1:42:9:6:3:23:39.13%:31:7.4174E-4:45:14:6:8:25 0/1:42:13:8:5:45:28.89%:43:4.4424E-5:43:32:17:15:48 0/1:39:8:6:2:19:42.11%:28:1.5455E-3:46:11:1:10:19 0/1:43:22:9:13:42:52.38%:82:5.4836E-9:45:20:10:10:44 0/1:39:13:6:7:38:34.21%:44:3.5456E-5:46:25:9:16:42 0/1:46:12:5:7:40:30%:40:9.2733E-5:43:28:12:16:42 0/1:51:9:4:5:23:39.13%:31:7.4174E-4:47:14:4:10:25 0/1:51:9:3:6:32:28.12%:29:1.0185E-3:47:23:14:9:34 0/1:41:19:10:9:56:33.93%:65:3.0264E-7:41:37:22:15:63 0/1:42:9:5:4:34:26.47%:29:1.0644E-3:44:25:12:13:38 0/1:37:12:8:4:33:36.36%:41:7.2075E-5:44:21:8:13:40 0/1:44:16:10:6:41:39.02%:56:2.4696E-6:47:25:11:14:47 0/0:38:5:4:1:36:13.89%:29:2.6944E-2:42:31:16:15:43 0/1:43:14:8:6:38:36.84%:48:1.407E-5:38:24:13:11:43 0/1:37:17:6:11:43:39.53%:59:1.0581E-6:37:26:17:9:48 0/1:42:17:12:5:48:35.42%:58:1.3619E-6:42:31:21:10:58 0/1:42:12:9:3:40:30%:40:9.2733E-5:42:28:18:10:49 0/1:44:12:7:5:34:35.29%:41:7.2075E-5:44:21:11:10:38 0/1:45:9:6:3:20:45%:32:6.1425E-4:38:11:7:4:21 0/0:37:3:1:2:21:14.29%:19:1.1585E-1:39:18:8:10:23 0/1:44:13:9:4:33:39.39%:45:2.8029E-5:44:20:7:13:41 0/0:44:6:5:1:26:23.08%:13:1.1309E-2:41:20:10:10:28 0/1:41:20:10:10:54:37.04%:69:1.0949E-7:46:34:15:19:58 0/0:46:6:4:2:31:19.35%:20:1.1977E-2:46:25:12:13:37 0/1:51:11:3:8:42:26.19%:36:2.3046E-4:47:31:14:17:44 0/1:44:10:5:5:27:37.04%:34:3.5253E-4:46:17:8:9:27 0/1:41:17:10:7:45:37.78%:59:1.1805E-6:38:28:9:19:51 0/1:40:7:6:1:23:30.43%:23:4.5803E-3:47:16:6:10:27 0/1:41:12:7:5:45:26.67%:39:1.05E-4:43:33:20:13:48 0/1:36:7:4:3:30:23.33%:22:5.2713E-3:46:23:12:11:31 0/1:37:10:7:3:28:35.71%:34:3.6855E-4:36:18:8:10:32 0/1:34:12:6:6:37:32.43%:40:8.4418E-5:43:25:13:12:41 0/1:42:7:4:3:30:23.33%:22:5.2713E-3:40:23:10:13:34 0/1:40:12:7:5:42:28.57%:40:9.7866E-5:45:30:17:13:53 0/1:40:13:6:7:35:37.14%:45:3.1103E-5:40:22:15:7:44 0/1:39:20:10:10:56:35.71%:69:1.204E-7:41:36:19:17:61 0/0:33:6:4:2:29:20.69%:18:1.1736E-2:45:23:7:16:30 0/1:36:8:6:2:29:27.59%:26:2.2392E-3:42:21:10:11:30 0/1:39:9:7:2:18:50%:32:5.1645E-4:47:9:5:4:19 0/1:39:7:4:3:23:30.43%:23:4.5803E-3:40:16:8:8:26 0/1:38:9:7:2:45:20%:29:1.2547E-3:44:36:21:15:50 0/1:44:9:3:6:37:24.32%:29:1.1256E-3:45:28:11:17:45 0/1:46:12:7:5:46:26.09%:39:1.0724E-4:43:34:20:14:56 0/1:37:23:9:14:44:52.27%:86:2.3136E-9:42:21:15:6:47 0/1:41:19:11:8:53:35.85%:65:2.6625E-7:42:34:16:18:57 0/1:37:7:5:2:29:24.14%:22:5.1909E-3:41:22:13:9:32 0/0:46:2:1:1:16:12.5%:15:2.4194E-1:40:14:6:8:19 0/1:36:15:8:7:44:34.09%:51:7.2456E-6:40:29:17:12:52 0/1:38:15:10:5:40:37.5%:52:6.0618E-6:40:25:10:15:48 0/1:41:13:9:4:46:28.26%:43:4.5578E-5:40:33:17:16:55 0/1:36:9:8:1:27:33.33%:30:8.8132E-4:39:18:7:11:32 0/1:39:7:5:2:31:22.58%:22:5.3469E-3:41:24:16:8:36 0/0:39:6:3:3:23:26.09%:11:1.0777E-2:43:17:9:8:27 0/1:38:14:9:5:50:28%:46:2.1224E-5:42:36:19:17:54 0/1:35:17:9:8:49:34.69%:58:1.4216E-6:42:32:14:18:53 0/1:40:14:7:7:34:41.18%:49:1.1295E-5:43:20:9:11:40 0/0:52:3:1:2:15:20%:11:1.1207E-1:39:12:6:6:23 0/1:36:7:3:4:50:14%:22:6.2398E-3:40:43:22:21:58 0/1:37:14:10:4:39:35.9%:48:1.4735E-5:40:25:11:14:40 0/1:36:8:5:3:30:26.67%:26:2.2875E-3:39:22:8:14:38 0/1:37:11:8:3:31:35.48%:37:1.6659E-4:40:20:10:10:37 0/1:36:17:10:7:45:37.78%:59:1.1805E-6:39:28:14:14:49 0/1:35:17:9:8:44:38.64%:59:1.1194E-6:40:27:11:16:51 0/1:36:12:10:2:42:28.57%:40:9.7866E-5:39:30:14:16:47 0/1:37:13:9:4:42:30.95%:43:4.0777E-5:38:29:15:14:43 0/1:34:12:8:4:33:36.36%:41:7.2075E-5:39:21:7:14:40 0/1:41:9:6:3:33:27.27%:29:1.042E-3:38:24:8:16:36 0/1:37:10:5:5:28:35.71%:34:3.6855E-4:37:18:10:8:30 0/1:39:9:6:3:30:30%:30:9.678E-4:39:21:10:11:35 0/1:39:15:11:4:47:31.91%:50:8.0864E-6:41:32:16:16:53 0/1:35:21:12:9:71:29.58%:70:8.3975E-8:39:50:30:20:81 0/1:39:16:9:7:54:29.63%:53:4.1444E-6:41:38:21:17:57 0/1:47:19:11:8:50:38%:66:2.2975E-7:42:31:20:11:55 0/1:43:14:9:5:47:29.79%:47:1.9604E-5:40:33:13:20:53 0/1:38:10:7:3:36:27.78%:33:4.7404E-4:43:26:10:16:38 0/1:39:17:12:5:44:38.64%:59:1.1194E-6:39:27:11:16:47 0/1:39:9:5:4:34:26.47%:29:1.0644E-3:43:25:13:12:36 0/1:40:9:5:4:33:27.27%:29:1.042E-3:43:24:17:7:41 0/1:37:10:7:3:42:23.81%:32:5.3293E-4:40:32:15:17:44 0/1:37:11:7:4:24:45.83%:39:1.1047E-4:44:13:9:4:32 0/1:36:18:13:5:47:38.3%:62:5.072E-7:39:29:14:15:51 0/1:42:9:4:5:38:23.68%:29:1.1442E-3:41:29:21:8:48 0/1:38:14:12:2:56:25%:46:2.416E-5:41:42:17:25:60 0/1:41:19:13:6:44:43.18%:68:1.5811E-7:42:25:13:12:51 MTB_anc 2163400 . A G . PASS AC=146;AF=0.487;AN=300;ANN=G|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3912T>C|p.Gly1304Gly|3912/4380|3912/4380|1304/1459||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163400A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163400A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:10:5:5:30:33.33%:33:3.9851E-4:41:20:12:8:30 0/1:51:11:4:7:21:52.38%:40:8.2399E-5:47:10:7:3:23 0/1:44:34:14:20:62:54.84%:99:1.0182E-13:45:28:20:8:72 0/1:44:14:5:9:31:45.16%:50:9.1194E-6:47:17:5:12:32 0/1:41:11:6:5:29:37.93%:38:1.5195E-4:47:18:9:9:35 0/1:51:14:6:8:28:50%:51:6.911E-6:46:14:8:6:31 0/1:52:13:7:6:32:40.62%:45:2.6443E-5:42:19:6:13:36 0/1:47:13:3:10:33:39.39%:45:2.8029E-5:41:20:14:6:36 0/1:45:27:13:14:61:44.26%:97:1.7985E-10:46:34:16:18:63 0/1:50:16:6:10:38:42.11%:56:2.0535E-6:45:22:12:10:42 0/1:51:11:7:4:39:28.95%:36:2.1011E-4:45:27:17:10:44 0/1:47:22:10:12:42:52.38%:82:5.4836E-9:40:20:12:8:46 0/1:50:11:4:7:35:31.43%:37:1.9282E-4:46:24:16:8:39 0/1:45:20:10:10:51:39.22%:70:9.3266E-8:38:31:17:14:53 0/1:44:13:4:9:27:48.15%:47:1.81E-5:43:14:7:7:35 0/1:41:13:3:10:35:37.14%:45:3.1103E-5:41:22:13:9:37 0/1:44:11:2:9:31:35.48%:37:1.6659E-4:46:20:12:8:34 0/1:43:6:3:3:14:42.86%:20:7.971E-3:45:8:4:4:17 0/1:43:9:8:1:20:45%:32:6.1425E-4:44:11:6:5:22 0/1:48:17:9:8:32:53.12%:63:4.1013E-7:46:15:9:6:34 0/1:46:13:6:7:20:65%:51:6.4422E-6:35:7:4:3:21 0/1:41:20:7:13:44:45.45%:72:5.7286E-8:40:24:16:8:53 0/1:49:10:4:6:25:40%:35:2.9985E-4:44:14:8:6:30 0/1:41:16:5:11:42:38.1%:55:2.607E-6:43:26:15:11:49 0/1:44:18:7:11:35:51.43%:67:1.9562E-7:47:17:6:11:40 0/1:46:22:8:14:41:53.66%:83:4.8137E-9:41:19:8:11:46 0/1:37:7:3:4:25:28%:23:4.8126E-3:44:18:10:8:29 0/1:44:14:8:6:31:45.16%:50:9.1194E-6:49:17:9:8:37 0/1:42:13:2:11:25:52%:48:1.4654E-5:42:12:9:3:33 0/1:37:16:9:7:35:45.71%:57:1.637E-6:42:19:9:10:41 0/1:44:15:8:7:38:39.47%:52:5.4463E-6:40:23:13:10:42 0/1:42:20:11:9:40:50%:74:3.8991E-8:48:20:8:12:46 0/1:46:17:7:10:36:47.22%:61:6.3405E-7:46:19:10:9:41 0/1:44:12:8:4:24:50%:44:3.8815E-5:41:12:9:3:28 0/1:44:21:10:11:45:46.67%:76:2.2206E-8:40:24:13:11:47 0/1:45:19:11:8:46:41.3%:67:1.8161E-7:36:27:11:16:49 0/1:40:15:9:6:40:37.5%:52:6.0618E-6:43:25:14:11:49 0/1:49:32:19:13:68:47.06%:99:1.8765E-12:43:36:22:14:75 0/1:45:19:15:4:52:36.54%:65:2.5408E-7:41:33:19:14:58 0/1:44:14:4:10:29:48.28%:51:7.6466E-6:45:15:8:7:33 0/1:41:18:10:8:42:42.86%:64:3.7193E-7:39:24:10:14:51 0/1:47:30:18:12:51:58.82%:99:1.9336E-12:39:21:9:12:64 0/1:44:16:12:4:39:41.03%:56:2.1927E-6:40:23:12:11:42 0/1:44:16:8:8:24:66.67%:64:3.2617E-7:47:8:3:5:31 0/1:43:20:12:8:48:41.67%:71:7.7415E-8:42:28:15:13:55 0/1:41:21:9:12:42:50%:77:1.6451E-8:38:21:12:9:52 0/1:39:14:8:6:35:40%:49:1.2005E-5:47:21:10:11:39 0/1:41:14:6:8:45:31.11%:47:1.8462E-5:43:31:17:14:56 0/1:43:27:10:17:52:51.92%:99:7.3303E-11:43:25:13:12:65 0/1:43:21:7:14:47:44.68%:75:2.6363E-8:39:26:12:14:51 0/1:39:10:5:5:24:41.67%:35:2.9985E-4:42:14:8:6:28 0/1:40:18:6:12:38:47.37%:65:2.68E-7:40:20:15:5:51 0/1:43:12:9:3:19:63.16%:47:1.8611E-5:43:7:4:3:22 0/1:48:12:3:9:29:41.38%:42:5.8193E-5:42:17:11:6:30 0/1:43:12:5:7:24:50%:44:3.8815E-5:35:12:6:6:34 0/1:46:24:10:14:48:50%:89:1.2355E-9:40:24:11:13:54 0/1:41:17:7:10:43:39.53%:59:1.0581E-6:45:26:11:15:55 0/0:39:5:4:1:27:18.52%:19:2.5527E-2:44:22:14:8:35 0/1:41:20:9:11:47:42.55%:71:7.2254E-8:39:27:15:12:50 0/1:45:20:8:12:42:47.62%:73:4.7857E-8:44:22:12:10:48 0/1:41:13:6:7:30:43.33%:46:2.3178E-5:44:17:9:8:35 0/1:43:14:6:8:27:51.85%:52:6.1806E-6:43:13:9:4:34 0/1:38:19:8:11:48:39.58%:66:2.0555E-7:39:29:16:13:59 0/1:49:18:12:6:32:56.25%:68:1.3089E-7:45:14:7:7:36 0/1:44:32:16:16:41:78.05%:99:5.8981E-15:39:9:6:3:47 0/1:45:27:16:11:50:54%:99:5.635E-11:42:23:15:8:61 0/1:39:11:4:7:24:45.83%:39:1.1047E-4:39:13:10:3:28 0/1:40:24:13:11:45:53.33%:90:8.5784E-10:41:21:10:11:53 0/1:47:11:2:9:24:45.83%:39:1.1047E-4:45:13:7:6:24 0/1:44:15:6:9:42:35.71%:51:6.364E-6:44:26:11:15:47 0/1:45:17:5:12:40:42.5%:60:8.743E-7:39:23:10:13:43 0/1:46:22:8:14:39:56.41%:84:3.6006E-9:50:17:7:10:43 0/1:47:10:2:8:26:38.46%:34:3.3576E-4:48:16:8:8:27 0/1:48:17:10:7:36:47.22%:61:6.3405E-7:49:19:8:11:37 0/1:42:19:6:13:49:38.78%:66:2.1763E-7:41:30:15:15:62 0/1:49:17:5:12:34:50%:62:5.1914E-7:40:17:6:11:39 0/1:43:18:6:12:37:48.65%:66:2.432E-7:39:19:11:8:41 0/1:46:17:5:12:38:44.74%:61:7.5297E-7:43:21:11:10:44 0/1:44:19:7:12:35:54.29%:71:6.3952E-8:42:16:9:7:43 0/1:41:14:7:7:39:35.9%:48:1.4735E-5:42:25:14:11:48 0/1:40:17:11:6:39:43.59%:60:8.1342E-7:40:22:10:12:48 0/1:36:22:15:7:53:41.51%:78:1.5031E-8:42:31:19:12:61 0/1:44:21:11:10:46:45.65%:76:2.4256E-8:42:25:13:12:55 0/1:44:20:10:10:38:52.63%:75:3.0805E-8:45:18:9:9:42 0/0:34:4:2:2:19:21.05%:13:5.251E-2:46:15:8:7:22 0/1:36:9:3:6:19:47.37%:32:5.667E-4:38:10:6:4:26 0/1:46:13:4:9:31:41.94%:46:2.4825E-5:43:18:12:6:42 0/1:38:14:5:9:26:53.85%:52:5.4595E-6:43:12:11:1:31 0/1:45:21:8:13:50:42%:74:3.2974E-8:46:29:15:14:60 0/1:47:20:9:11:30:66.67%:81:7.1675E-9:44:10:5:5:34 0/1:44:25:12:13:44:56.82%:96:2.3358E-10:47:19:8:11:47 0/1:46:11:5:6:25:44%:39:1.1933E-4:43:14:7:7:27 0/1:34:20:4:16:47:42.55%:71:7.2254E-8:42:27:17:10:54 0/1:39:15:5:10:29:51.72%:55:2.6068E-6:38:14:8:6:32 0/1:44:24:13:11:45:53.33%:90:8.5784E-10:41:21:12:9:51 0/1:45:17:8:9:28:60.71%:66:2.1913E-7:38:11:7:4:30 0/1:38:11:2:9:29:37.93%:38:1.5195E-4:34:18:11:7:34 0/1:38:15:6:9:31:48.39%:54:3.2298E-6:39:16:7:9:40 0/1:38:14:5:9:25:56%:53:4.7528E-6:44:11:5:6:30 0/1:43:25:10:15:45:55.56%:95:2.7295E-10:39:20:11:9:54 0/1:40:16:8:8:38:42.11%:56:2.0535E-6:44:22:12:10:48 0/1:36:22:8:14:53:41.51%:78:1.5031E-8:39:31:16:15:64 0/1:43:13:4:9:24:54.17%:48:1.2938E-5:39:11:10:1:30 0/1:43:14:5:9:27:51.85%:52:6.1806E-6:33:13:8:5:30 0/0:38:5:1:4:17:29.41%:8:2.2239E-2:41:12:8:4:19 0/1:41:13:8:5:24:54.17%:48:1.2938E-5:40:11:6:5:28 0/1:41:25:15:10:46:54.35%:95:3.158E-10:40:21:13:8:51 0/1:45:22:8:14:39:56.41%:84:3.6006E-9:39:17:6:11:45 0/1:40:21:10:11:54:38.89%:73:4.2301E-8:42:33:15:18:61 0/1:46:8:4:4:42:19.05%:25:2.7074E-3:39:34:16:18:49 0/1:41:20:7:13:43:46.51%:72:5.2508E-8:44:23:12:11:51 0/1:35:14:6:8:26:53.85%:52:5.4595E-6:37:12:9:3:30 0/1:40:11:4:7:19:57.89%:42:6.2811E-5:37:8:5:3:23 0/1:39:12:5:7:37:32.43%:40:8.4418E-5:37:25:11:14:49 0/1:38:15:2:13:39:38.46%:52:5.7558E-6:39:24:14:10:46 0/1:40:15:6:9:39:38.46%:52:5.7558E-6:40:24:17:7:53 0/1:40:11:4:7:28:39.29%:38:1.4422E-4:39:17:11:6:34 0/1:39:16:9:7:32:50%:59:1.2304E-6:40:16:9:7:42 0/1:47:10:3:7:20:50%:36:2.1796E-4:34:10:5:5:27 0/1:41:25:12:13:42:59.52%:97:1.6529E-10:40:17:13:4:50 0/1:38:18:6:12:48:37.5%:62:5.3443E-7:39:30:14:16:55 0/1:46:14:5:9:37:37.84%:48:1.3393E-5:37:23:12:11:42 0/1:37:7:3:4:17:41.18%:24:3.6151E-3:44:10:4:6:19 0/1:38:27:12:15:44:61.36%:99:2.0452E-11:35:17:10:7:61 0/1:38:19:7:12:41:46.34%:69:1.2413E-7:37:22:16:6:48 0/1:35:17:4:13:31:54.84%:64:3.5853E-7:37:14:8:6:40 0/1:34:12:4:8:35:34.29%:41:7.8434E-5:35:23:16:7:39 0/1:38:16:6:10:40:40%:56:2.3315E-6:38:24:17:7:53 0/1:37:18:4:14:44:40.91%:63:4.2568E-7:35:26:15:11:54 0/1:36:19:6:13:39:48.72%:69:1.0268E-7:37:20:14:6:51 0/1:39:18:5:13:36:50%:66:2.1904E-7:35:18:12:6:46 0/1:40:13:4:9:36:36.11%:44:3.2589E-5:36:23:13:10:45 0/1:42:9:1:8:28:32.14%:30:9.1169E-4:37:19:12:7:35 0/1:38:11:5:6:30:36.67%:37:1.594E-4:38:19:10:9:36 0/1:37:12:4:8:25:48%:43:4.2836E-5:38:13:9:4:32 0/1:46:13:3:10:38:34.21%:44:3.5456E-5:41:25:19:6:47 0/1:37:24:9:15:61:39.34%:84:3.5204E-9:34:37:22:15:85 0/1:42:31:15:16:54:57.41%:99:9.7868E-13:40:23:14:9:59 0/1:43:20:13:7:46:43.48%:71:6.7171E-8:45:26:14:12:61 0/1:37:18:7:11:40:45%:64:3.1919E-7:41:22:12:10:51 0/1:41:20:8:12:38:52.63%:75:3.0805E-8:34:18:11:7:41 0/1:36:17:5:12:42:40.48%:60:9.9678E-7:40:25:17:8:48 0/1:44:18:8:10:35:51.43%:67:1.9562E-7:39:17:8:9:40 0/1:39:17:11:6:36:47.22%:61:6.3405E-7:40:19:12:7:45 0/1:39:20:6:14:39:51.28%:74:3.4806E-8:36:19:12:7:46 0/0:44:6:2:4:24:25%:11:1.0968E-2:43:18:12:6:33 0/1:41:16:6:10:43:37.21%:55:2.7433E-6:38:27:19:8:54 0/1:37:19:12:7:42:45.24%:68:1.3525E-7:39:23:10:13:54 0/1:40:28:11:17:51:54.9%:99:2.0643E-11:37:23:15:8:58 0/1:42:17:7:10:41:41.46%:60:9.3546E-7:39:24:16:8:48 MTB_anc 2163403 . A G . PASS AC=145;AF=0.483;AN=300;ANN=G|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3909T>C|p.Pro1303Pro|3909/4380|3909/4380|1303/1459||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163403A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163403A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:10:5:5:30:33.33%:33:3.9851E-4:41:20:11:9:31 0/1:51:11:4:7:22:50%:40:9.1981E-5:46:11:7:4:23 0/1:45:34:14:20:67:50.75%:99:1.9669E-13:45:33:21:12:73 0/1:45:14:5:9:33:42.42%:49:1.0577E-5:46:19:6:13:33 0/1:40:13:7:6:33:39.39%:45:2.8029E-5:46:20:11:9:35 0/1:49:14:6:8:29:48.28%:51:7.6466E-6:45:15:8:7:31 0/1:50:14:8:6:34:41.18%:49:1.1295E-5:44:20:6:14:36 0/1:48:14:4:10:38:36.84%:48:1.407E-5:40:24:14:10:40 0/1:47:26:13:13:61:42.62%:93:4.9329E-10:47:35:15:20:64 0/1:50:13:5:8:36:36.11%:44:3.2589E-5:46:23:13:10:41 0/1:51:13:7:6:45:29.55%:43:4.324E-5:45:31:18:13:48 0/1:45:19:7:12:42:45.24%:69:1.2413E-7:40:22:13:9:45 0/1:48:12:5:7:36:33.33%:40:8.1472E-5:48:24:16:8:39 0/1:46:19:9:10:50:38%:66:2.2975E-7:40:31:17:14:53 0/1:45:11:2:9:27:40.74%:38:1.362E-4:44:16:7:9:35 0/1:39:14:4:10:37:37.84%:48:1.3393E-5:42:23:14:9:39 0/1:45:11:3:8:31:35.48%:37:1.6659E-4:46:20:12:8:33 0/1:43:6:3:3:16:37.5%:20:8.837E-3:44:10:4:6:17 0/1:45:9:8:1:19:47.37%:32:5.667E-4:46:10:6:4:22 0/1:50:16:8:8:32:50%:59:1.2304E-6:46:16:9:7:34 0/1:48:11:5:6:20:55%:41:7.2653E-5:38:9:5:4:21 0/1:43:19:7:12:45:42.22%:67:1.6979E-7:40:26:15:11:52 0/1:50:10:4:6:24:41.67%:35:2.9985E-4:46:14:7:7:30 0/1:41:16:5:11:43:37.21%:55:2.7433E-6:43:27:15:12:49 0/1:43:18:7:11:37:48.65%:66:2.432E-7:48:19:7:12:40 0/1:45:25:11:14:46:54.35%:95:3.158E-10:42:21:8:13:47 0/0:38:6:2:4:24:25%:11:1.0968E-2:45:18:10:8:28 0/1:43:15:9:6:31:48.39%:54:3.2298E-6:49:16:8:8:37 0/1:41:13:3:10:27:48.15%:47:1.81E-5:43:14:10:4:32 0/1:41:14:7:7:36:38.89%:48:1.2704E-5:41:22:9:13:41 0/1:42:17:11:6:42:40.48%:60:9.9678E-7:42:25:13:12:43 0/1:44:17:8:9:39:43.59%:61:7.5297E-7:50:21:9:12:46 0/1:47:15:6:9:39:38.46%:52:5.7558E-6:45:24:10:14:41 0/1:47:11:7:4:27:40.74%:38:1.362E-4:42:16:10:6:29 0/1:44:18:8:10:45:40%:63:4.5278E-7:41:27:13:14:47 0/1:44:19:11:8:47:40.43%:67:1.9354E-7:37:28:11:17:50 0/1:41:17:11:6:41:41.46%:60:9.3546E-7:44:24:14:10:49 0/1:47:30:17:13:69:43.48%:99:1.6064E-11:43:39:21:18:74 0/1:47:17:13:4:54:31.48%:57:1.655E-6:43:36:19:17:58 0/1:44:14:4:10:31:45.16%:50:9.1194E-6:44:17:8:9:33 0/1:39:20:12:8:48:41.67%:71:7.7415E-8:39:28:13:15:51 0/1:44:32:20:12:56:57.14%:99:4.1537E-13:42:24:10:14:63 0/1:44:17:13:4:43:39.53%:59:1.0581E-6:42:26:13:13:44 0/1:45:16:8:8:29:55.17%:60:8.4872E-7:43:13:6:7:32 0/1:43:20:13:7:50:40%:70:8.793E-8:45:30:15:15:54 0/1:42:20:9:11:43:46.51%:72:5.2508E-8:40:23:12:11:53 0/1:43:11:5:6:33:33.33%:37:1.8019E-4:46:22:8:14:39 0/1:45:11:4:7:47:23.4%:35:2.5227E-4:44:36:18:18:55 0/1:44:28:11:17:59:47.46%:99:5.349E-11:43:31:14:17:65 0/1:43:20:6:14:49:40.82%:70:8.2643E-8:41:29:15:14:51 0/1:42:7:3:4:21:33.33%:23:4.3101E-3:43:14:7:7:27 0/1:42:18:7:11:41:43.9%:64:3.454E-7:41:23:12:11:50 0/1:43:12:9:3:19:63.16%:47:1.8611E-5:44:7:4:3:22 0/1:49:11:3:8:30:36.67%:37:1.594E-4:42:19:12:7:32 0/1:43:13:6:7:29:44.83%:46:2.1506E-5:38:16:7:9:33 0/1:45:23:9:14:47:48.94%:84:3.2602E-9:42:24:11:13:53 0/1:43:16:6:10:45:35.56%:55:3.0122E-6:47:29:12:17:55 0/0:52:3:2:1:30:10%:31:1.1864E-1:44:27:14:13:34 0/1:41:22:10:12:50:44%:79:1.2104E-8:39:28:15:13:50 0/1:46:20:8:12:44:45.45%:72:5.7286E-8:44:24:13:11:47 0/1:43:13:6:7:30:43.33%:46:2.3178E-5:45:17:9:8:34 0/1:44:13:6:7:27:48.15%:47:1.81E-5:45:14:8:6:34 0/1:40:18:7:11:49:36.73%:62:5.6162E-7:39:31:16:15:58 0/1:50:18:12:6:34:52.94%:67:1.7305E-7:44:16:8:8:36 0/1:42:33:17:16:42:78.57%:99:1.8121E-15:40:9:6:3:47 0/1:47:24:14:10:51:47.06%:87:1.6778E-9:41:27:17:10:60 0/1:45:10:3:7:26:38.46%:34:3.3576E-4:41:16:10:6:28 0/1:43:20:11:9:48:41.67%:71:7.7415E-8:40:28:12:16:51 0/1:48:10:1:9:22:45.45%:35:2.6061E-4:47:12:7:5:23 0/1:43:16:6:10:46:34.78%:55:3.1446E-6:44:30:13:17:48 0/1:44:17:5:12:40:42.5%:60:8.743E-7:41:23:9:14:43 0/1:46:21:9:12:39:53.85%:79:1.1402E-8:50:18:7:11:42 0/1:46:9:2:7:24:37.5%:31:7.7962E-4:50:15:7:8:26 0/1:49:16:10:6:36:44.44%:57:1.7753E-6:49:20:9:11:37 0/1:42:21:8:13:53:39.62%:73:3.9927E-8:42:32:14:18:63 0/1:49:15:5:10:34:44.12%:53:4.1835E-6:42:19:7:12:38 0/1:45:17:5:12:36:47.22%:61:6.3405E-7:41:19:11:8:41 0/1:47:18:6:12:39:46.15%:65:2.9336E-7:45:21:11:10:44 0/1:42:19:7:12:37:51.35%:70:8.2514E-8:42:18:8:10:42 0/1:43:12:7:5:42:28.57%:40:9.7866E-5:41:30:14:16:47 0/1:37:19:13:6:44:43.18%:68:1.5811E-7:42:25:9:16:49 0/1:38:16:11:5:49:32.65%:54:3.5325E-6:42:33:19:14:59 0/1:42:19:10:9:45:42.22%:67:1.6979E-7:43:26:13:13:54 0/1:45:19:10:9:40:47.5%:69:1.1326E-7:42:21:10:11:42 0/0:35:4:2:2:19:21.05%:13:5.251E-2:49:15:8:7:23 0/1:36:9:3:6:20:45%:32:6.1425E-4:38:11:6:5:26 0/1:47:14:4:10:37:37.84%:48:1.3393E-5:43:23:11:12:43 0/1:39:12:3:9:25:48%:43:4.2836E-5:45:13:11:2:31 0/1:48:19:7:12:50:38%:66:2.2975E-7:46:31:15:16:60 0/1:46:21:10:11:31:67.74%:86:2.4087E-9:44:10:4:6:34 0/1:45:25:11:14:46:54.35%:95:3.158E-10:48:21:8:13:47 0/1:43:11:5:6:25:44%:39:1.1933E-4:43:14:7:7:25 0/1:36:18:3:15:49:36.73%:62:5.6162E-7:42:31:17:14:53 0/1:42:14:5:9:29:48.28%:51:7.6466E-6:39:15:7:8:32 0/1:44:23:12:11:49:46.94%:84:3.9694E-9:41:26:13:13:51 0/1:45:17:8:9:30:56.67%:65:3.0928E-7:39:13:7:6:30 0/1:37:12:3:9:33:36.36%:41:7.2075E-5:37:21:12:9:34 0/1:39:13:4:9:31:41.94%:46:2.4825E-5:43:18:7:11:40 0/1:39:13:5:8:30:43.33%:46:2.3178E-5:42:17:7:10:30 0/1:45:22:9:13:45:48.89%:81:7.724E-9:41:23:12:11:55 0/1:41:17:9:8:41:41.46%:60:9.3546E-7:44:24:14:10:48 0/1:37:20:6:14:54:37.04%:69:1.0949E-7:40:34:15:19:63 0/1:42:13:4:9:29:44.83%:46:2.1506E-5:38:16:12:4:31 0/1:42:17:8:9:32:53.12%:63:4.1013E-7:36:15:8:7:32 0/0:38:5:1:4:18:27.78%:8:2.2727E-2:44:13:10:3:20 0/1:41:12:8:4:24:50%:44:3.8815E-5:40:12:6:6:27 0/1:40:26:15:11:47:55.32%:99:1.1545E-10:42:21:13:8:51 0/1:45:23:9:14:45:51.11%:85:2.6125E-9:40:22:8:14:46 0/1:42:19:9:10:53:35.85%:65:2.5408E-7:44:33:13:20:63 0/1:48:8:4:4:44:18.18%:25:2.7573E-3:40:36:17:19:49 0/1:37:21:8:13:45:46.67%:76:2.2206E-8:45:24:12:12:50 0/1:37:12:5:7:27:44.44%:42:5.0681E-5:37:15:10:5:30 0/1:41:10:3:7:21:47.62%:36:2.3971E-4:38:11:5:6:23 0/1:38:13:6:7:41:31.71%:44:3.9497E-5:39:28:11:17:49 0/1:38:14:2:12:43:32.56%:47:1.727E-5:40:29:16:13:47 0/1:39:18:6:12:49:36.73%:62:5.6162E-7:41:31:20:11:52 0/1:45:10:4:6:27:37.04%:34:3.5253E-4:40:17:10:7:32 0/1:39:16:10:6:36:44.44%:57:1.7753E-6:38:20:9:11:41 0/1:45:11:4:7:22:50%:40:9.1981E-5:37:11:5:6:27 0/1:40:25:12:13:44:56.82%:96:2.3358E-10:40:19:13:6:50 0/1:40:16:5:11:47:34.04%:54:3.2755E-6:41:31:16:15:54 0/1:51:11:4:7:34:32.35%:37:1.8662E-4:39:23:12:11:41 0/1:40:7:3:4:17:41.18%:24:3.6151E-3:45:10:4:6:19 0/1:38:27:13:14:51:52.94%:99:6.451E-11:37:24:10:14:60 0/1:41:18:5:13:43:41.86%:63:3.9871E-7:39:25:17:8:48 0/1:35:16:4:12:38:42.11%:56:2.0535E-6:39:22:11:11:40 0/1:36:11:2:9:31:35.48%:37:1.6659E-4:37:20:13:7:38 0/1:37:17:6:11:48:35.42%:58:1.3619E-6:37:31:20:11:54 0/1:38:18:4:14:50:36%:62:5.8874E-7:38:32:16:16:54 0/1:36:19:7:12:46:41.3%:67:1.8161E-7:38:27:14:13:48 0/1:39:20:6:14:39:51.28%:74:3.4806E-8:37:19:14:5:48 0/1:44:12:3:9:37:32.43%:40:8.4418E-5:37:25:12:13:46 0/1:39:10:2:8:30:33.33%:33:3.9851E-4:38:20:12:8:34 0/1:34:11:6:5:31:35.48%:37:1.6659E-4:39:20:10:10:37 0/1:38:12:4:8:28:42.86%:42:5.4482E-5:39:16:9:7:30 0/1:43:14:6:8:41:34.15%:47:1.6028E-5:41:27:17:10:45 0/1:38:23:8:15:64:35.94%:79:1.0637E-8:35:41:22:19:84 0/1:41:29:13:16:56:51.79%:99:1.3048E-11:41:27:15:12:62 0/1:44:19:11:8:51:37.25%:66:2.4191E-7:43:32:16:16:61 0/1:37:17:5:12:41:41.46%:60:9.3546E-7:41:24:12:12:50 0/1:41:20:8:12:38:52.63%:75:3.0805E-8:37:18:11:7:41 0/1:37:15:5:10:43:34.88%:51:6.9561E-6:42:28:17:11:46 0/1:44:17:7:10:36:47.22%:61:6.3405E-7:40:19:9:10:40 0/1:41:14:8:6:37:37.84%:48:1.3393E-5:40:23:13:10:44 0/1:43:19:5:14:37:51.35%:70:8.2514E-8:39:18:11:7:46 0/0:41:6:2:4:28:21.43%:16:1.1603E-2:40:22:10:12:33 0/1:42:16:7:9:48:33.33%:54:3.4048E-6:38:32:19:13:55 0/1:38:17:10:7:44:38.64%:59:1.1194E-6:40:27:10:17:53 0/1:42:25:9:16:50:50%:92:5.2124E-10:38:25:15:10:55 0/1:44:15:5:10:44:34.09%:51:7.2456E-6:39:29:18:11:49 MTB_anc 2163412 . A G . PASS AC=82;AF=0.273;AN=300;ANN=G|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3900T>C|p.Val1300Val|3900/4380|3900/4380|1300/1459||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163412A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163412A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:7:4:3:30:23.33%:22:5.2713E-3:44:23:12:11:30 0/0:60:1:1:0:20:5%:27:5E-1:52:19:11:8:23 0/1:37:15:12:3:69:21.74%:48:1.3016E-5:44:54:20:34:79 0/0:54:5:2:3:35:14.29%:30:2.6822E-2:43:30:11:19:36 0/0:47:5:2:3:30:16.67%:21:2.6093E-2:45:25:14:11:35 0/0:43:6:3:3:29:20.69%:18:1.1736E-2:44:23:11:12:33 0/1:42:8:2:6:33:24.24%:26:2.4173E-3:45:25:11:14:36 0/1:39:7:2:5:36:19.44%:22:5.6667E-3:44:29:15:14:39 0/1:55:7:3:4:58:12.07%:21:6.4484E-3:45:51:24:27:62 0/1:44:8:3:5:39:20.51%:25:2.624E-3:50:31:16:15:42 0/1:42:8:6:2:45:17.78%:25:2.7808E-3:48:37:21:16:47 0/0:39:4:1:3:42:9.52%:43:5.801E-2:44:38:19:19:46 0/1:44:8:5:3:33:24.24%:26:2.4173E-3:49:25:15:10:37 0/1:36:13:9:4:49:26.53%:43:4.8866E-5:45:36:18:18:53 0/0:44:5:3:2:27:18.52%:19:2.5527E-2:43:22:9:13:34 0/1:45:10:4:6:36:27.78%:33:4.7404E-4:41:26:14:12:38 0/1:46:8:6:2:34:23.53%:26:2.4562E-3:45:26:10:16:35 0/0:36:3:1:2:17:17.65%:14:1.1364E-1:44:14:6:8:18 0/0:0:0:0:0:19:0%:37:1E0:46:19:13:6:23 0/1:47:7:6:1:32:21.88%:22:5.4182E-3:48:25:12:13:33 0/0:38:2:2:0:18:11.11%:18:2.4286E-1:47:16:6:10:19 0/1:37:7:3:4:53:13.21%:21:6.3251E-3:43:46:25:21:56 0/0:60:3:2:1:27:11.11%:28:1.1792E-1:47:24:11:13:31 0/0:41:6:5:1:43:13.95%:36:1.2967E-2:41:37:18:19:51 0/1:43:9:3:6:34:26.47%:29:1.0644E-3:44:25:11:14:40 0/1:40:11:4:7:46:23.91%:36:2.4819E-4:44:35:14:21:49 0/0:51:5:3:2:23:21.74%:14:2.4548E-2:41:18:7:11:29 0/1:41:8:6:2:31:25.81%:26:2.3332E-3:46:23:13:10:37 0/0:39:2:2:0:29:6.9%:37:2.4561E-1:41:27:12:15:34 0/0:43:4:4:0:36:11.11%:34:5.7257E-2:40:32:15:17:41 0/1:41:13:7:6:43:30.23%:43:4.2025E-5:43:30:17:13:47 0/1:42:12:8:4:41:29.27%:40:9.5339E-5:44:29:14:15:46 0/0:48:6:3:3:39:15.38%:31:1.2702E-2:47:33:15:18:41 0/0:48:6:5:1:25:24%:14:1.1145E-2:45:19:11:8:29 0/1:43:7:4:3:43:16.28%:22:5.9972E-3:43:36:16:20:49 0/1:36:7:3:4:43:16.28%:22:5.9972E-3:40:36:16:20:48 0/1:39:11:8:3:41:26.83%:36:2.2563E-4:42:30:19:11:48 0/1:37:10:7:3:72:13.89%:31:6.9868E-4:46:62:35:27:74 0/1:40:12:7:5:55:21.82%:39:1.2473E-4:45:43:26:17:61 0/0:31:5:3:2:33:15.15%:27:2.6557E-2:44:28:10:18:36 0/1:36:11:5:6:46:23.91%:36:2.4819E-4:41:35:21:14:52 0/1:38:8:4:4:56:14.29%:25:2.9874E-3:42:48:27:21:64 0/1:37:8:6:2:42:19.05%:25:2.7074E-3:45:34:20:14:45 0/0:34:5:2:3:27:18.52%:19:2.5527E-2:45:22:12:10:31 0/1:44:10:8:2:47:21.28%:32:5.7272E-4:44:37:19:18:53 0/1:35:8:3:5:44:18.18%:25:2.7573E-3:41:36:20:16:52 0/1:44:10:6:4:37:27.03%:33:4.8486E-4:47:27:11:16:41 0/1:40:16:11:5:48:33.33%:54:3.4048E-6:44:32:13:19:59 0/1:43:11:7:4:55:20%:35:2.8065E-4:44:44:17:27:64 0/0:36:4:3:1:45:8.89%:50:5.8311E-2:44:41:17:24:52 0/1:47:7:4:3:23:30.43%:23:4.5803E-3:43:16:8:8:28 0/1:39:9:6:3:42:21.43%:29:1.2112E-3:41:33:18:15:51 0/0:39:6:3:3:22:27.27%:9:1.057E-2:40:16:10:6:22 0/0:42:6:5:1:32:18.75%:20:1.2087E-2:46:26:11:15:34 0/0:37:3:1:2:28:10.71%:28:1.1818E-1:42:25:14:11:34 0/1:36:10:6:4:48:20.83%:32:5.7985E-4:44:38:15:23:55 0/1:37:10:7:3:39:25.64%:32:5.0524E-4:45:29:5:24:52 0/1:40:9:3:6:33:27.27%:29:1.042E-3:43:24:16:8:39 0/1:40:9:6:3:46:19.57%:28:1.2682E-3:42:37:18:19:49 0/1:46:7:3:4:46:15.22%:22:6.1097E-3:45:39:17:22:49 0/0:45:3:2:1:30:10%:31:1.1864E-1:44:27:13:14:32 0/0:35:5:2:3:28:17.86%:19:2.5729E-2:45:23:14:9:34 0/1:37:11:7:4:49:22.45%:35:2.6004E-4:40:38:20:18:57 0/0:45:5:3:2:35:14.29%:30:2.6822E-2:45:30:19:11:38 0/0:38:2:2:0:41:4.88%:57:2.4691E-1:42:39:21:18:46 0/1:37:9:7:2:54:16.67%:28:1.3596E-3:45:45:27:18:61 0/0:41:4:2:2:25:16%:21:5.4928E-2:39:21:10:11:29 0/0:45:3:0:3:44:6.82%:53:1.2069E-1:44:41:23:18:51 0/0:38:2:2:0:23:8.7%:28:2.4444E-1:48:21:6:15:24 0/0:44:4:2:2:46:8.7%:49:5.8402E-2:42:42:19:23:50 0/0:37:3:2:1:38:7.89%:43:1.2E-1:44:35:14:21:41 0/0:40:6:4:2:39:15.38%:31:1.2702E-2:48:33:13:20:41 0/0:49:5:2:3:23:21.74%:14:2.4548E-2:46:18:7:11:26 0/0:36:3:1:2:36:8.33%:40:1.1972E-1:49:33:18:15:38 0/1:39:7:3:4:48:14.58%:22:6.1774E-3:43:41:20:21:61 0/0:37:3:1:2:34:8.82%:37:1.194E-1:47:31:12:19:39 0/0:38:5:4:1:39:12.82%:35:2.7273E-2:42:34:15:19:45 0/0:39:1:1:0:38:2.63%:58:5E-1:45:37:16:21:43 0/1:44:7:4:3:39:17.95%:22:5.8219E-3:43:32:14:18:43 0/1:37:11:7:4:42:26.19%:36:2.3046E-4:43:31:18:13:49 0/1:37:10:7:3:46:21.74%:32:5.6532E-4:40:36:16:20:53 0/1:40:12:7:5:58:20.69%:38:1.2966E-4:40:46:27:19:64 0/1:35:7:5:2:47:14.89%:22:6.1442E-3:46:40:18:22:54 0/0:48:6:4:2:38:15.79%:28:1.2628E-2:43:32:15:17:40 0/0:38:5:3:2:23:21.74%:14:2.4548E-2:44:18:9:9:25 0/1:38:7:5:2:23:30.43%:23:4.5803E-3:37:16:5:11:27 0/1:39:9:3:6:38:23.68%:29:1.1442E-3:45:29:14:15:43 0/0:43:6:5:1:24:25%:11:1.0968E-2:47:18:10:8:29 0/1:38:9:5:4:54:16.67%:28:1.3596E-3:46:45:20:25:60 0/0:35:2:0:2:31:6.45%:40:2.459E-1:44:29:16:13:33 0/1:43:8:5:3:43:18.6%:25:2.7329E-3:47:35:13:22:46 0/0:38:3:3:0:22:13.64%:19:1.1628E-1:45:19:9:10:25 0/1:37:10:7:3:45:22.22%:32:5.5766E-4:41:35:13:22:52 0/0:34:1:1:0:29:3.45%:45:5E-1:40:28:13:15:32 0/1:38:10:7:3:46:21.74%:32:5.6532E-4:44:36:18:18:51 0/0:38:5:3:2:27:18.52%:19:2.5527E-2:42:22:11:11:29 0/1:36:7:1:6:33:21.21%:22:5.4855E-3:40:26:15:11:35 0/1:36:8:5:3:30:26.67%:26:2.2875E-3:41:22:7:15:40 0/0:37:5:2:3:27:18.52%:19:2.5527E-2:43:22:8:14:32 0/1:37:10:7:3:49:20.41%:32:5.8675E-4:41:39:16:23:59 0/0:37:6:4:2:40:15%:30:1.2773E-2:44:34:18:16:47 0/1:36:12:8:4:53:22.64%:39:1.2122E-4:41:41:17:24:64 0/0:37:5:4:1:27:18.52%:19:2.5527E-2:38:22:12:10:33 0/0:38:3:2:1:28:10.71%:28:1.1818E-1:41:25:10:15:29 0/0:33:2:1:1:18:11.11%:18:2.4286E-1:41:16:9:7:21 0/0:60:1:1:0:24:4.17%:34:5E-1:41:23:12:11:27 0/1:41:7:5:2:43:16.28%:22:5.9972E-3:40:36:21:15:51 0/1:42:8:3:5:41:19.51%:25:2.6808E-3:43:33:14:19:45 0/1:40:17:9:8:54:31.48%:57:1.7118E-6:44:37:16:21:64 0/1:37:16:11:5:44:36.36%:55:2.8784E-6:41:28:9:19:50 0/1:35:7:4:3:45:15.56%:22:6.0738E-3:41:38:16:22:47 0/1:35:9:5:4:26:34.62%:30:8.4928E-4:38:17:8:9:30 0/0:37:3:1:2:19:15.79%:17:1.1486E-1:44:16:7:9:23 0/1:35:10:4:6:42:23.81%:32:5.3293E-4:40:32:18:14:49 0/1:37:7:4:3:39:17.95%:22:5.8219E-3:39:32:12:20:48 0/1:37:8:4:4:44:18.18%:25:2.7573E-3:41:36:19:17:53 0/1:37:10:4:6:32:31.25%:33:4.259E-4:42:22:11:11:34 0/1:35:7:5:2:35:20%:22:5.6095E-3:42:28:15:13:41 0/0:38:1:1:0:21:4.76%:31:5E-1:42:20:11:9:26 0/0:37:5:1:4:48:10.42%:46:2.8014E-2:39:43:25:18:50 0/1:38:15:8:7:46:32.61%:51:7.8109E-6:40:31:14:17:53 0/0:42:6:3:3:35:17.14%:25:1.238E-2:44:29:15:14:40 0/0:35:3:2:1:15:20%:11:1.1207E-1:40:12:5:7:19 0/1:35:8:3:5:45:17.78%:25:2.7808E-3:37:37:18:19:57 0/0:34:6:5:1:41:14.63%:33:1.2841E-2:38:35:16:19:49 0/0:37:3:1:2:32:9.38%:34:1.1905E-1:38:29:11:18:41 0/0:39:4:3:1:34:11.76%:31:5.6946E-2:36:30:14:16:42 0/1:35:7:5:2:41:17.07%:22:5.9136E-3:38:34:17:17:54 0/1:37:13:7:6:47:27.66%:43:4.6702E-5:38:34:10:24:55 0/1:37:15:6:9:49:30.61%:50:8.6234E-6:39:34:16:18:53 0/0:36:6:3:3:40:15%:30:1.2773E-2:37:34:17:17:48 0/0:36:6:1:5:35:17.14%:25:1.238E-2:40:29:14:15:48 0/1:37:9:6:3:28:32.14%:30:9.1169E-4:40:19:7:12:35 0/1:35:8:5:3:33:24.24%:26:2.4173E-3:40:25:10:15:38 0/1:35:10:6:4:27:37.04%:34:3.5253E-4:43:17:7:10:29 0/0:45:6:5:1:42:14.29%:33:1.2905E-2:42:36:19:17:47 0/1:37:18:12:6:71:25.35%:59:1.1117E-6:40:53:29:24:86 0/1:38:9:7:2:59:15.25%:28:1.4054E-3:41:50:24:26:63 0/1:45:9:5:4:56:16.07%:28:1.3788E-3:43:47:25:22:63 0/1:40:12:6:6:43:27.91%:39:1.0032E-4:41:31:11:20:48 0/0:36:2:1:1:35:5.71%:47:2.4638E-1:41:33:17:16:39 0/1:37:8:5:3:42:19.05%:25:2.7074E-3:40:34:16:18:47 0/0:38:1:1:0:34:2.94%:51:5E-1:41:33:15:18:40 0/0:35:4:4:0:39:10.53%:37:5.7534E-2:41:34:19:15:46 0/0:32:2:1:1:37:5.41%:50:2.4658E-1:43:35:13:22:46 0/0:33:3:2:1:22:13.64%:19:1.1628E-1:44:19:8:11:31 0/1:34:7:6:1:48:14.58%:22:6.1774E-3:42:41:21:20:57 0/0:36:6:3:3:47:12.77%:42:1.3188E-2:41:41:19:22:51 0/1:36:7:3:4:48:14.58%:22:6.1774E-3:39:41:18:23:56 0/0:36:5:4:1:44:11.36%:41:2.7721E-2:41:39:20:19:46 MTB_anc 2163415 . C A . PASS AC=90;AF=0.300;AN=300;ANN=A|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3897G>T|p.Pro1299Pro|3897/4380|3897/4380|1299/1459||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163415C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163415C>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:7:4:3:29:24.14%:22:5.1909E-3:44:22:12:10:31 0/0:46:2:1:1:20:10%:21:2.4359E-1:52:18:10:8:21 0/1:35:16:13:3:69:23.19%:52:5.7142E-6:43:53:20:33:77 0/0:55:5:2:3:34:14.71%:27:2.6693E-2:42:29:11:18:36 0/0:54:4:1:3:30:13.33%:26:5.62E-2:44:26:15:11:36 0/0:47:5:3:2:27:18.52%:19:2.5527E-2:45:22:10:12:32 0/0:42:6:3:3:30:20%:18:1.186E-2:46:24:11:13:36 0/1:37:7:3:4:34:20.59%:22:5.5492E-3:43:27:14:13:39 0/1:53:8:3:5:54:14.81%:25:2.9557E-3:46:46:23:23:62 0/1:43:8:3:5:37:21.62%:25:2.5617E-3:51:29:14:15:42 0/1:42:7:5:2:41:17.07%:22:5.9136E-3:48:34:18:16:47 0/0:35:6:3:3:44:13.64%:36:1.3026E-2:41:38:20:18:46 0/1:43:8:5:3:35:22.86%:26:2.4931E-3:46:27:17:10:39 0/1:35:11:9:2:47:23.4%:35:2.5227E-4:43:36:17:19:52 0/1:41:9:5:4:29:31.03%:30:9.4048E-4:44:20:7:13:33 0/1:46:9:4:5:33:27.27%:29:1.042E-3:41:24:12:12:38 0/0:51:6:5:1:30:20%:18:1.186E-2:47:24:9:15:34 0/0:38:2:1:1:16:12.5%:15:2.4194E-1:44:14:6:8:18 0/0:36:1:0:1:20:5%:27:5E-1:45:19:14:5:23 0/1:47:7:6:1:31:22.58%:22:5.3469E-3:46:24:12:12:33 0/0:39:2:2:0:17:11.76%:18:2.4242E-1:46:15:5:10:17 0/0:37:6:4:2:49:12.24%:44:1.3285E-2:43:43:24:19:57 0/0:60:3:2:1:26:11.54%:25:1.1765E-1:45:23:11:12:30 0/1:38:7:5:2:40:17.5%:22:5.8688E-3:42:33:15:18:50 0/1:42:9:2:7:35:25.71%:29:1.0857E-3:43:26:10:16:40 0/1:42:10:4:6:44:22.73%:32:5.4972E-4:44:34:14:20:49 0/1:44:7:5:2:25:28%:23:4.8126E-3:42:18:9:9:29 0/1:41:8:6:2:33:24.24%:26:2.4173E-3:45:25:14:11:37 0/0:35:3:2:1:31:9.68%:34:1.1885E-1:40:28:10:18:33 0/0:46:3:3:0:32:9.38%:34:1.1905E-1:40:29:13:16:41 0/1:42:13:7:6:43:30.23%:43:4.2025E-5:43:30:17:13:47 0/1:41:12:8:4:42:28.57%:40:9.7866E-5:43:30:15:15:46 0/1:45:7:3:4:38:18.42%:22:5.7727E-3:45:31:13:18:40 0/1:46:7:5:2:28:25%:22:5.1054E-3:42:21:13:8:29 0/1:44:7:4:3:43:16.28%:22:5.9972E-3:43:36:17:19:50 0/1:34:7:3:4:40:17.5%:22:5.8688E-3:43:33:17:16:48 0/1:40:11:8:3:37:29.73%:36:2.0455E-4:40:26:14:12:48 0/1:33:8:7:1:64:12.5%:25:3.0959E-3:47:56:31:25:74 0/1:40:13:10:3:55:23.64%:42:5.473E-5:45:42:24:18:60 0/0:38:4:2:2:32:12.5%:29:5.6596E-2:44:28:11:17:35 0/1:32:10:5:5:40:25%:32:5.1483E-4:41:30:15:15:52 0/1:39:9:4:5:55:16.36%:28:1.3694E-3:41:46:24:22:67 0/1:36:8:6:2:41:19.51%:25:2.6808E-3:45:33:19:14:47 0/0:33:5:2:3:28:17.86%:19:2.5729E-2:42:23:12:11:32 0/1:45:10:8:2:41:24.39%:32:5.2405E-4:45:31:16:15:53 0/1:33:8:3:5:39:20.51%:25:2.624E-3:43:31:15:16:50 0/1:43:11:6:5:33:33.33%:37:1.8019E-4:48:22:7:15:40 0/1:40:19:12:7:51:37.25%:66:2.4191E-7:42:32:13:19:64 0/1:39:15:8:7:57:26.32%:49:1.0583E-5:42:42:18:24:64 0/1:34:7:4:3:46:15.22%:22:6.1097E-3:42:39:14:25:51 0/1:47:7:4:3:23:30.43%:23:4.5803E-3:41:16:7:9:28 0/1:39:10:7:3:40:25%:32:5.1483E-4:41:30:16:14:51 0/0:45:3:3:0:18:16.67%:14:1.1429E-1:40:15:9:6:22 0/0:43:5:4:1:32:15.62%:24:2.6412E-2:44:27:11:16:34 0/0:34:3:1:2:27:11.11%:28:1.1792E-1:41:24:14:10:35 0/1:34:10:6:4:51:19.61%:32:5.9987E-4:42:41:16:25:56 0/1:35:12:8:4:37:32.43%:40:8.4418E-5:46:25:6:19:50 0/1:38:10:4:6:33:30.3%:33:4.3872E-4:44:23:15:8:40 0/1:39:11:7:4:48:22.92%:35:2.5621E-4:41:37:18:19:49 0/1:46:7:3:4:44:15.91%:22:6.0363E-3:46:37:17:20:49 0/0:45:3:2:1:27:11.11%:28:1.1792E-1:44:24:11:13:31 0/0:32:4:2:2:26:15.38%:20:5.5222E-2:44:22:13:9:35 0/1:35:12:5:7:48:25%:39:1.1153E-4:41:36:17:19:58 0/0:46:5:3:2:32:15.62%:24:2.6412E-2:47:27:17:10:37 0/0:38:3:2:1:42:7.14%:49:1.2048E-1:43:39:21:18:45 0/1:34:12:8:4:56:21.43%:38:1.2642E-4:45:44:27:17:60 0/0:40:5:3:2:25:20%:17:2.5076E-2:40:20:10:10:30 0/0:38:6:2:4:47:12.77%:39:1.3136E-2:42:40:22:18:52 0/0:36:3:3:0:22:13.64%:19:1.1628E-1:50:19:6:13:23 0/0:41:5:2:3:45:11.11%:44:2.7799E-2:42:40:17:23:51 0/0:35:4:3:1:36:11.11%:34:5.7257E-2:44:32:13:19:41 0/1:39:7:4:3:40:17.5%:22:5.8688E-3:47:33:13:20:41 0/0:50:5:2:3:22:22.73%:12:2.4248E-2:48:17:7:10:26 0/0:37:3:1:2:37:8.11%:43:1.1986E-1:49:34:18:16:38 0/1:41:8:3:5:49:16.33%:25:2.8658E-3:44:41:19:22:62 0/0:35:3:1:2:34:8.82%:37:1.194E-1:47:31:12:19:39 0/0:34:5:3:2:39:12.82%:35:2.7273E-2:41:34:15:19:45 0/0:33:4:2:2:38:10.53%:37:5.7534E-2:44:34:13:21:43 0/1:44:7:3:4:38:18.42%:22:5.7727E-3:43:31:15:16:41 0/1:36:13:7:6:41:31.71%:44:3.9497E-5:44:28:16:12:49 0/1:37:12:8:4:47:25.53%:39:1.0942E-4:39:35:15:20:52 0/1:40:10:7:3:52:19.23%:32:6.0611E-4:41:42:24:18:66 0/1:35:7:5:2:45:15.56%:22:6.0738E-3:46:38:16:22:54 0/0:50:5:3:2:35:14.29%:30:2.6822E-2:44:30:14:16:40 0/0:39:5:3:2:22:22.73%:12:2.4248E-2:43:17:7:10:26 0/1:40:8:7:1:19:42.11%:28:1.5455E-3:39:11:2:9:27 0/1:33:10:3:7:39:25.64%:32:5.0524E-4:44:29:13:16:43 0/1:45:7:6:1:23:30.43%:23:4.5803E-3:46:16:9:7:28 0/1:38:9:5:4:51:17.65%:28:1.3283E-3:46:42:18:24:59 0/0:34:2:0:2:29:6.9%:37:2.4561E-1:44:27:14:13:33 0/1:46:9:5:4:45:20%:29:1.2547E-3:47:36:14:22:46 0/0:36:4:3:1:23:17.39%:18:5.4264E-2:44:19:9:10:24 0/1:35:12:8:4:47:25.53%:39:1.0942E-4:41:35:13:22:54 0/0:28:2:1:1:27:7.41%:34:2.4528E-1:42:25:12:13:31 0/1:36:11:7:4:45:24.44%:36:2.4398E-4:44:34:19:15:50 0/0:38:5:3:2:27:18.52%:19:2.5527E-2:42:22:11:11:28 0/1:35:7:1:6:32:21.88%:22:5.4182E-3:39:25:14:11:35 0/1:36:8:5:3:29:27.59%:26:2.2392E-3:40:21:6:15:39 0/0:31:6:4:2:27:22.22%:16:1.1461E-2:44:21:7:14:32 0/1:37:11:9:2:49:22.45%:35:2.6004E-4:41:38:16:22:58 0/1:36:8:6:2:39:20.51%:25:2.624E-3:44:31:15:16:48 0/1:35:13:8:5:51:25.49%:42:5.092E-5:41:38:15:23:63 0/1:37:8:6:2:31:25.81%:26:2.3332E-3:38:23:12:11:33 0/0:38:3:2:1:26:11.54%:25:1.1765E-1:42:23:9:14:29 0/0:34:4:3:1:19:21.05%:13:5.251E-2:42:15:8:7:21 0/0:46:2:1:1:25:8%:31:2.449E-1:40:23:12:11:27 0/1:39:8:5:3:42:19.05%:25:2.7074E-3:42:34:19:15:49 0/1:39:9:3:6:39:23.08%:29:1.162E-3:43:30:11:19:47 0/1:41:15:9:6:51:29.41%:50:9.1412E-6:44:36:16:20:62 0/1:36:17:12:5:41:41.46%:60:9.3546E-7:42:24:8:16:50 0/0:37:6:4:2:40:15%:30:1.2773E-2:41:34:13:21:46 0/0:34:5:4:1:19:26.32%:10:2.3166E-2:38:14:7:7:30 0/0:33:3:0:3:19:15.79%:17:1.1486E-1:40:16:8:8:23 0/1:33:11:4:7:41:26.83%:36:2.2563E-4:39:30:15:15:49 0/1:35:10:5:5:42:23.81%:32:5.3293E-4:39:32:13:19:49 0/1:34:9:5:4:45:20%:29:1.2547E-3:41:36:18:18:51 0/1:36:8:5:3:28:28.57%:26:2.188E-3:45:20:10:10:34 0/1:36:9:5:4:37:24.32%:29:1.1256E-3:41:28:15:13:41 0/0:37:2:1:1:21:9.52%:25:2.439E-1:43:19:11:8:27 0/0:36:5:3:2:45:11.11%:44:2.7799E-2:39:40:22:18:50 0/1:37:13:9:4:38:34.21%:44:3.5456E-5:41:25:10:15:54 0/1:39:7:4:3:34:20.59%:22:5.5492E-3:44:27:13:14:39 0/0:36:3:1:2:17:17.65%:14:1.1364E-1:37:14:5:9:19 0/1:35:11:4:7:44:25%:36:2.3962E-4:37:33:16:17:56 0/1:36:8:7:1:45:17.78%:25:2.7808E-3:38:37:18:19:51 0/0:30:5:3:2:33:15.15%:27:2.6557E-2:39:28:12:16:41 0/1:37:7:6:1:36:19.44%:22:5.6667E-3:35:29:14:15:42 0/1:35:10:7:3:46:21.74%:32:5.6532E-4:38:36:18:18:53 0/1:36:14:8:6:44:31.82%:47:1.7873E-5:39:30:10:20:53 0/1:35:12:6:6:44:27.27%:39:1.027E-4:38:32:15:17:52 0/0:34:6:4:2:42:14.29%:33:1.2905E-2:37:36:18:18:49 0/0:33:6:3:3:35:17.14%:25:1.238E-2:41:29:15:14:45 0/1:36:11:8:3:31:35.48%:37:1.6659E-4:39:20:7:13:36 0/1:32:8:5:3:30:26.67%:26:2.2875E-3:38:22:7:15:38 0/1:35:7:5:2:24:29.17%:23:4.7006E-3:42:17:7:10:29 0/1:41:9:7:2:42:21.43%:29:1.1955E-3:41:32:17:15:46 0/1:36:22:14:8:72:30.56%:74:3.5822E-8:39:50:25:25:89 0/1:40:9:7:2:55:16.36%:28:1.3694E-3:42:46:22:24:63 0/1:43:11:7:4:55:20%:35:2.8065E-4:42:44:23:21:63 0/1:40:12:6:6:42:28.57%:40:9.7866E-5:40:30:11:19:49 0/0:35:3:1:2:35:8.57%:40:1.1957E-1:40:32:16:16:39 0/1:32:8:6:2:42:19.05%:25:2.7074E-3:40:34:16:18:47 0/0:35:4:3:1:35:11.43%:35:5.7106E-2:42:31:13:18:40 0/0:36:5:4:1:38:13.16%:32:2.7169E-2:40:33:18:15:46 0/0:37:4:4:0:36:11.11%:34:5.7257E-2:43:32:13:19:45 0/0:35:4:3:1:26:15.38%:20:5.5222E-2:43:22:9:13:31 0/1:35:10:7:3:49:20.41%:32:5.8675E-4:40:39:20:19:58 0/0:36:5:2:3:43:11.63%:41:2.764E-2:40:38:15:23:50 0/0:35:6:3:3:46:13.04%:39:1.3136E-2:38:40:18:22:55 0/0:37:6:5:1:45:13.33%:39:1.3082E-2:40:39:20:19:47 MTB_anc 2163417 . G C . PASS AC=94;AF=0.313;AN=300;ANN=C|missense_variant|MODERATE|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3895C>G|p.Pro1299Ala|3895/4380|3895/4380|1299/1459||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163417G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163417G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:6:3:3:28:21.43%:16:1.1603E-2:41:22:12:10:31 0/0:47:2:1:1:19:10.53%:21:2.4324E-1:51:17:10:7:21 0/1:37:16:13:3:66:24.24%:52:5.4307E-6:42:50:19:31:75 0/0:55:5:2:3:32:15.62%:24:2.6412E-2:42:27:9:18:36 0/1:44:7:3:4:31:22.58%:22:5.3469E-3:42:24:14:10:36 0/0:44:6:3:3:27:22.22%:16:1.1461E-2:47:21:9:12:32 0/1:43:8:3:5:29:27.59%:26:2.2392E-3:47:21:10:11:35 0/1:39:7:3:4:33:21.21%:22:5.4855E-3:44:26:12:14:39 0/1:52:9:3:6:58:15.52%:28:1.388E-3:42:48:23:25:62 0/1:43:8:3:5:39:20.51%:25:2.624E-3:46:31:15:16:43 0/1:41:8:6:2:40:20%:25:2.653E-3:48:32:18:14:48 0/1:38:7:3:4:40:17.5%:22:5.8688E-3:43:33:16:17:45 0/1:46:8:5:3:34:23.53%:26:2.4562E-3:47:26:16:10:39 0/1:37:13:10:3:51:25.49%:43:4.9906E-5:41:37:17:20:55 0/0:43:5:3:2:23:21.74%:14:2.4548E-2:44:18:5:13:33 0/1:46:9:4:5:33:27.27%:29:1.0185E-3:41:23:11:12:39 0/1:48:7:6:1:31:22.58%:22:5.3469E-3:46:24:9:15:35 0/0:37:3:2:1:17:17.65%:14:1.1364E-1:40:14:6:8:18 0/0:30:1:0:1:21:4.76%:31:5E-1:44:20:13:7:24 0/1:47:7:6:1:29:24.14%:22:5.1909E-3:46:22:10:12:34 0/0:39:2:2:0:15:13.33%:16:2.4138E-1:42:13:4:9:17 0/0:36:6:3:3:45:13.33%:39:1.3082E-2:42:39:19:20:58 0/0:60:3:2:1:22:13.64%:19:1.1628E-1:43:19:7:12:30 0/1:38:8:5:3:40:20%:25:2.653E-3:40:32:15:17:51 0/1:42:10:3:7:33:30.3%:33:4.3872E-4:44:23:9:14:40 0/1:39:11:4:7:45:24.44%:36:2.4398E-4:42:34:14:20:48 0/1:45:8:6:2:24:33.33%:27:1.949E-3:38:16:8:8:29 0/1:41:8:6:2:30:26.67%:26:2.2875E-3:47:22:12:10:37 0/0:39:3:2:1:28:10.71%:28:1.1818E-1:39:25:8:17:34 0/0:48:3:3:0:32:9.38%:34:1.1905E-1:36:29:12:17:43 0/1:42:13:7:6:42:30.95%:43:4.0777E-5:41:29:15:14:46 0/1:41:12:8:4:41:29.27%:40:9.5339E-5:42:29:14:15:47 0/1:45:8:3:5:35:22.86%:26:2.4931E-3:46:27:12:15:39 0/1:46:7:5:2:26:26.92%:23:4.9169E-3:43:19:10:9:29 0/1:40:11:7:4:43:25.58%:36:2.3512E-4:43:32:13:19:49 0/0:37:6:3:3:38:15.79%:28:1.2628E-2:42:32:16:16:49 0/1:40:11:9:2:37:29.73%:36:2.0455E-4:39:26:15:11:49 0/1:34:12:7:5:72:16.67%:38:1.4827E-4:45:60:33:27:76 0/1:38:12:8:4:51:23.53%:39:1.1751E-4:43:39:23:16:60 0/0:34:5:3:2:32:15.62%:24:2.6412E-2:41:27:10:17:35 0/1:37:12:5:7:41:29.27%:40:9.5339E-5:41:29:16:13:52 0/1:37:10:4:6:57:17.54%:31:6.345E-4:41:47:24:23:66 0/1:36:12:7:5:41:29.27%:40:9.5339E-5:45:29:17:12:48 0/0:33:6:3:3:28:21.43%:16:1.1603E-2:40:22:10:12:32 0/1:45:11:8:3:43:25.58%:36:2.3512E-4:44:32:18:14:55 0/1:33:8:3:5:40:20%:25:2.653E-3:40:32:16:16:49 0/1:45:11:7:4:34:32.35%:37:1.8662E-4:47:23:8:15:42 0/1:39:21:11:10:52:40.38%:74:3.7578E-8:40:31:12:19:64 0/1:41:14:8:6:55:25.45%:46:2.3698E-5:41:41:17:24:64 0/0:34:6:3:3:46:13.04%:39:1.3136E-2:41:40:16:24:52 0/1:50:7:5:2:21:33.33%:23:4.3101E-3:40:14:5:9:28 0/1:36:10:6:4:40:25%:32:5.1483E-4:38:30:16:14:51 0/0:39:5:3:2:20:25%:10:2.3562E-2:40:15:9:6:23 0/0:42:6:5:1:28:21.43%:16:1.1603E-2:44:22:10:12:34 0/0:34:3:1:2:27:11.11%:28:1.1792E-1:41:24:11:13:35 0/1:35:9:6:3:47:19.15%:28:1.2811E-3:40:38:13:25:55 0/1:36:10:6:4:33:30.3%:33:4.3872E-4:45:23:4:19:50 0/1:37:13:5:8:34:38.24%:45:2.9583E-5:45:21:13:8:40 0/1:38:10:7:3:45:22.22%:32:5.5766E-4:41:35:17:18:50 0/1:45:8:4:4:43:18.6%:25:2.7329E-3:44:35:15:20:49 0/0:41:4:2:2:27:14.81%:23:5.5494E-2:42:23:10:13:31 0/0:32:6:2:4:28:21.43%:16:1.1603E-2:43:22:12:10:36 0/1:37:14:7:7:45:31.11%:47:1.8462E-5:40:31:15:16:57 0/0:45:5:3:2:30:16.67%:21:2.6093E-2:46:25:15:10:35 0/0:40:3:2:1:39:7.69%:47:1.2013E-1:41:36:18:18:46 0/1:36:13:9:4:56:23.21%:42:5.5625E-5:42:43:26:17:61 0/1:37:8:4:4:24:33.33%:27:1.949E-3:40:16:8:8:29 0/0:37:6:2:4:46:13.04%:39:1.3136E-2:40:40:21:19:53 0/0:43:2:2:0:21:9.52%:25:2.439E-1:48:19:5:14:24 0/0:43:4:2:2:43:9.3%:43:5.801E-2:43:38:16:22:51 0/0:36:5:3:2:34:14.71%:27:2.6693E-2:43:29:11:18:41 0/0:39:6:4:2:37:16.22%:28:1.2549E-2:45:31:12:19:41 0/0:47:6:3:3:23:26.09%:11:1.0777E-2:46:17:6:11:26 0/0:37:3:1:2:36:8.33%:40:1.1972E-1:48:33:17:16:39 0/1:37:10:4:6:50:20%:32:5.9342E-4:43:40:18:22:61 0/0:35:5:1:4:37:13.51%:32:2.706E-2:44:32:14:18:40 0/0:34:6:4:2:40:15%:30:1.2773E-2:40:34:14:20:46 0/0:34:4:2:2:35:11.43%:35:5.7106E-2:43:31:11:20:43 0/1:45:8:4:4:35:22.86%:26:2.4931E-3:40:27:12:15:40 0/1:36:14:7:7:39:35.9%:48:1.4735E-5:45:25:13:12:50 0/1:37:13:7:6:42:30.95%:43:4.0777E-5:38:29:11:18:50 0/1:39:10:7:3:50:20%:32:5.9342E-4:39:40:21:19:63 0/1:36:7:5:2:43:16.28%:22:5.9972E-3:43:36:15:21:53 0/1:45:7:4:3:30:23.33%:22:5.2713E-3:44:23:10:13:40 0/0:42:4:3:1:19:21.05%:13:5.251E-2:44:15:6:9:26 0/1:38:9:7:2:22:40.91%:31:7.0165E-4:35:13:2:11:28 0/1:34:9:4:5:34:26.47%:29:1.0644E-3:43:25:11:14:42 0/1:41:7:6:1:20:35%:23:4.158E-3:49:13:7:6:29 0/1:38:10:5:5:53:18.87%:32:6.1215E-4:44:43:18:25:57 0/0:30:3:0:3:28:10.71%:28:1.1818E-1:43:25:12:13:32 0/1:48:8:5:3:42:19.05%:25:2.7074E-3:44:34:12:22:48 0/0:38:3:3:0:20:15%:16:1.1538E-1:39:17:7:10:24 0/1:36:11:7:4:42:26.19%:36:2.3046E-4:39:31:8:23:57 0/0:33:3:1:2:29:10.34%:31:1.1842E-1:39:26:12:14:32 0/1:37:12:7:5:42:28.57%:40:9.7866E-5:44:30:15:15:49 0/0:38:5:3:2:27:18.52%:19:2.5527E-2:40:22:11:11:28 0/0:36:6:1:5:32:18.75%:20:1.2087E-2:37:26:13:13:37 0/1:41:9:7:2:27:33.33%:30:8.8132E-4:40:18:6:12:38 0/0:34:5:4:1:25:20%:17:2.5076E-2:43:20:8:12:33 0/1:35:14:7:7:50:28%:46:2.1224E-5:40:36:14:22:58 0/1:33:8:5:3:35:22.86%:26:2.4931E-3:41:27:12:15:48 0/1:36:15:9:6:48:31.25%:50:8.3573E-6:39:33:11:22:61 0/0:36:6:5:1:27:22.22%:16:1.1461E-2:37:21:11:10:32 0/0:37:3:2:1:26:11.54%:25:1.1765E-1:39:23:8:15:29 0/0:36:4:4:0:19:21.05%:13:5.251E-2:42:15:8:7:21 0/0:60:1:1:0:21:4.76%:31:5E-1:37:20:10:10:27 0/1:37:11:6:5:43:25.58%:36:2.3512E-4:39:32:16:16:52 0/1:41:9:3:6:39:23.08%:29:1.162E-3:41:30:10:20:48 0/1:39:17:8:9:55:30.91%:57:1.768E-6:42:38:13:25:65 0/1:38:17:12:5:42:40.48%:60:9.9678E-7:40:25:9:16:51 0/1:35:7:3:4:41:17.07%:22:5.9136E-3:39:34:13:21:48 0/1:35:8:5:3:24:33.33%:27:1.949E-3:36:16:9:7:31 0/0:33:4:1:3:21:19.05%:15:5.3471E-2:40:17:8:9:23 0/1:34:10:4:6:36:27.78%:33:4.7404E-4:36:26:11:15:49 0/1:33:8:5:3:41:19.51%:25:2.653E-3:38:32:11:21:49 0/1:35:12:6:6:49:24.49%:39:1.1358E-4:39:37:19:18:52 0/1:36:7:4:3:23:30.43%:23:4.5803E-3:41:16:6:10:34 0/1:36:9:5:4:33:27.27%:29:1.042E-3:41:24:12:12:40 0/0:39:2:1:1:21:9.52%:25:2.439E-1:41:19:10:9:29 0/0:35:6:3:3:44:13.64%:36:1.3026E-2:37:38:19:19:52 0/1:36:18:10:8:48:37.5%:62:5.3443E-7:37:30:13:17:55 0/0:42:6:3:3:31:19.35%:20:1.1977E-2:44:25:11:14:39 0/0:33:4:2:2:18:22.22%:10:5.1948E-2:36:14:5:9:20 0/1:33:14:5:9:47:29.79%:47:1.9604E-5:35:33:17:16:55 0/1:36:9:7:2:42:21.43%:29:1.2112E-3:38:33:15:18:49 0/1:34:7:3:4:37:18.92%:22:5.721E-3:36:30:12:18:41 0/1:36:9:7:2:37:24.32%:29:1.1256E-3:34:28:14:14:41 0/1:33:11:7:4:42:26.19%:36:2.3046E-4:35:31:15:16:53 0/1:36:15:9:6:44:34.09%:51:7.2456E-6:36:29:8:21:53 0/1:37:12:5:7:43:27.91%:39:1.0032E-4:36:31:13:18:53 0/1:35:7:4:3:41:17.07%:22:5.9136E-3:36:34:15:19:49 0/1:33:9:3:6:38:23.68%:29:1.1442E-3:39:29:15:14:45 0/1:37:9:7:2:27:33.33%:30:8.8132E-4:37:18:6:12:36 0/0:34:6:4:2:28:21.43%:16:1.1603E-2:36:22:7:15:36 0/1:36:7:6:1:21:33.33%:23:4.3101E-3:39:14:4:10:30 0/1:41:9:7:2:37:24.32%:29:1.1256E-3:42:28:13:15:45 0/1:36:25:14:11:71:35.21%:86:2.2765E-9:36:46:20:26:87 0/1:39:10:7:3:53:18.87%:32:6.1215E-4:40:43:19:24:62 0/1:41:13:7:6:49:26.53%:43:4.8866E-5:43:36:17:19:63 0/1:37:13:5:8:46:28.26%:43:4.5578E-5:38:33:12:21:49 0/0:34:3:1:2:30:10%:31:1.1864E-1:38:27:12:15:38 0/1:33:9:6:3:36:25%:29:1.1061E-3:36:27:12:15:46 0/0:36:4:2:2:34:11.76%:31:5.6946E-2:40:30:12:18:39 0/0:33:6:5:1:35:17.14%:25:1.238E-2:39:29:16:13:49 0/0:38:5:5:0:34:14.71%:27:2.6693E-2:41:29:10:19:44 0/0:34:5:4:1:25:20%:17:2.5076E-2:38:20:7:13:31 0/1:33:12:9:3:49:24.49%:39:1.1358E-4:39:37:17:20:58 0/0:35:5:2:3:40:12.5%:35:2.7371E-2:38:35:13:22:50 0/1:34:9:5:4:46:19.57%:28:1.2682E-3:38:37:17:20:55 0/1:34:7:5:2:44:15.91%:22:6.0363E-3:40:37:18:19:48 MTB_anc 2163419 . C T . PASS AC=82;AF=0.273;AN=300;ANN=T|missense_variant|MODERATE|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3893G>A|p.Ser1298Asn|3893/4380|3893/4380|1298/1459||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163419C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163419C>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:7:4:3:30:23.33%:22:5.2713E-3:41:23:13:10:31 0/0:48:2:1:1:20:10%:21:2.4359E-1:50:18:10:8:21 0/1:36:15:12:3:69:21.74%:48:1.3016E-5:41:54:21:33:78 0/0:51:6:2:4:34:17.65%:23:1.2287E-2:41:28:11:17:36 0/0:48:5:2:3:33:15.15%:27:2.6557E-2:41:28:16:12:37 0/0:42:5:3:2:31:16.13%:24:2.6257E-2:43:26:12:14:33 0/0:47:5:2:3:27:18.52%:19:2.5527E-2:47:22:10:12:34 0/0:40:5:2:3:36:13.89%:29:2.6944E-2:43:31:16:15:41 0/1:51:9:3:6:58:15.52%:28:1.3968E-3:43:49:22:27:63 0/1:41:8:3:5:40:20%:25:2.653E-3:46:32:16:16:45 0/1:42:7:6:1:42:16.67%:22:5.9563E-3:47:35:19:16:48 0/0:38:6:2:4:39:15.38%:31:1.2702E-2:43:33:16:17:44 0/1:45:7:4:3:34:20.59%:22:5.5492E-3:45:27:16:11:39 0/1:33:11:8:3:49:22.45%:35:2.6004E-4:43:38:18:20:54 0/0:42:6:3:3:26:23.08%:13:1.1309E-2:43:20:5:15:33 0/1:43:10:4:6:34:29.41%:33:4.51E-4:41:24:13:11:40 0/1:46:8:6:2:34:23.53%:26:2.4562E-3:45:26:10:16:35 0/0:39:1:0:1:12:8.33%:14:5E-1:45:11:4:7:18 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:24 0/0:48:6:5:1:31:19.35%:20:1.1977E-2:49:25:11:14:36 0/0:37:2:2:0:17:11.76%:18:2.4242E-1:42:15:4:11:18 0/0:36:6:4:2:51:11.76%:47:1.3375E-2:40:45:22:23:58 0/0:56:3:2:1:24:12.5%:22:1.1702E-1:44:21:8:13:29 0/1:38:7:5:2:44:15.91%:22:5.9972E-3:41:36:18:18:52 0/1:45:8:2:6:35:22.86%:26:2.4931E-3:42:27:10:17:41 0/1:41:11:3:8:45:24.44%:36:2.4398E-4:42:34:14:20:49 0/0:51:5:3:2:24:20.83%:14:2.4823E-2:39:19:8:11:30 0/1:40:8:6:2:32:25%:26:2.3764E-3:44:24:14:10:36 0/0:38:1:1:0:30:3.33%:44:5E-1:38:29:10:19:36 0/0:42:3:3:0:30:10%:31:1.1864E-1:38:27:12:15:40 0/1:41:12:7:5:42:28.57%:40:9.7866E-5:42:30:15:15:48 0/1:41:11:7:4:44:25%:36:2.3962E-4:40:33:16:17:48 0/1:45:7:3:4:37:18.92%:22:5.721E-3:43:30:13:17:39 0/0:49:6:5:1:27:22.22%:16:1.1461E-2:45:21:12:9:30 0/1:43:7:3:4:43:16.28%:22:5.9972E-3:41:36:16:20:50 0/1:37:8:4:4:39:20.51%:25:2.624E-3:41:31:13:18:48 0/1:39:10:8:2:40:25%:32:5.1483E-4:38:30:18:12:47 0/1:33:7:6:1:70:10%:21:6.659E-3:45:62:35:27:76 0/1:37:11:8:3:54:20.37%:35:2.7747E-4:43:43:26:17:65 0/0:41:3:1:2:30:10%:31:1.1864E-1:42:27:10:17:35 0/1:36:8:5:3:42:19.05%:25:2.7074E-3:40:34:18:16:53 0/1:36:9:4:5:57:15.79%:28:1.388E-3:40:48:25:23:68 0/1:34:9:5:4:45:20%:29:1.2547E-3:44:36:20:16:50 0/0:34:6:3:3:27:22.22%:16:1.1461E-2:41:21:12:9:29 0/1:40:12:8:4:46:26.09%:39:1.0724E-4:43:34:16:18:53 0/1:33:9:3:6:39:23.08%:29:1.162E-3:41:30:14:16:48 0/1:44:10:6:4:35:28.57%:33:4.6276E-4:46:25:9:16:42 0/1:41:17:10:7:54:31.48%:57:1.7118E-6:39:37:14:23:63 0/1:39:15:8:7:55:27.27%:49:1.0121E-5:42:40:16:24:63 0/0:33:6:3:3:45:13.33%:39:1.3082E-2:40:39:17:22:52 0/1:48:7:4:3:24:29.17%:23:4.7006E-3:43:17:9:8:29 0/1:39:9:5:4:44:20.45%:29:1.2408E-3:38:35:20:15:51 0/0:39:5:3:2:20:25%:10:2.3166E-2:40:14:8:6:23 0/0:43:6:5:1:33:18.18%:23:1.219E-2:43:27:10:17:35 0/0:36:3:1:2:31:9.68%:31:1.1864E-1:40:27:14:13:36 0/1:35:8:4:4:50:16%:25:2.8851E-3:40:42:15:27:57 0/1:34:12:8:4:40:30%:40:9.2733E-5:43:28:5:23:52 0/1:37:12:4:8:34:35.29%:41:7.5302E-5:44:22:14:8:39 0/1:39:10:6:4:43:23.26%:32:5.4148E-4:41:33:17:16:49 0/1:44:8:4:4:47:17.02%:25:2.8249E-3:45:39:18:21:51 0/0:41:4:2:2:28:14.29%:23:5.5746E-2:44:24:11:13:31 0/0:31:5:2:3:27:18.52%:19:2.5527E-2:42:22:13:9:32 0/1:36:10:3:7:47:21.28%:32:5.7272E-4:40:37:19:18:57 0/0:42:5:3:2:32:15.62%:24:2.6412E-2:45:27:17:10:35 0/0:40:3:2:1:41:7.32%:50:1.2037E-1:40:38:21:17:46 0/1:32:9:7:2:52:17.31%:28:1.3391E-3:42:43:24:19:60 0/0:39:5:3:2:23:21.74%:14:2.4548E-2:38:18:9:9:30 0/0:41:4:0:4:42:9.52%:43:5.801E-2:41:38:22:16:53 0/0:31:3:3:0:22:13.64%:19:1.1628E-1:47:19:6:13:24 0/0:43:4:2:2:46:8.7%:49:5.8402E-2:41:42:19:23:50 0/0:37:3:2:1:36:8.33%:40:1.1957E-1:43:32:12:20:41 0/0:40:5:4:1:37:13.51%:32:2.706E-2:45:32:12:20:42 0/0:49:5:2:3:26:19.23%:17:2.531E-2:43:21:9:12:27 0/0:38:3:1:2:38:7.89%:43:1.2E-1:47:35:18:17:39 0/1:35:10:4:6:52:19.23%:32:6.0611E-4:40:42:20:22:62 0/0:37:4:1:3:35:11.43%:35:5.7106E-2:48:31:13:18:39 0/0:34:5:3:2:37:13.51%:32:2.706E-2:40:32:14:18:43 0/0:34:3:2:1:39:7.69%:47:1.2013E-1:41:36:15:21:43 0/1:44:7:4:3:35:20%:22:5.6095E-3:40:28:13:15:41 0/1:36:11:5:6:39:28.21%:36:2.1547E-4:43:28:15:13:49 0/1:37:9:6:3:41:21.95%:29:1.1955E-3:38:32:12:20:51 0/1:39:8:6:2:49:16.33%:25:2.8658E-3:40:41:22:19:63 0/0:37:5:4:1:42:11.9%:38:2.7555E-2:42:37:16:21:52 0/1:44:7:4:3:38:18.42%:22:5.7727E-3:42:31:14:17:40 0/0:40:3:2:1:20:15%:16:1.1538E-1:42:17:7:10:25 0/1:38:8:7:1:20:40%:27:1.638E-3:37:12:1:11:26 0/1:40:7:1:6:35:20%:22:5.6095E-3:43:28:14:14:42 0/1:41:7:5:2:24:29.17%:23:4.7006E-3:46:17:8:9:28 0/1:37:8:4:4:51:15.69%:25:2.8851E-3:46:42:19:23:54 0/0:32:2:0:2:28:7.14%:34:2.4545E-1:44:26:13:13:34 0/1:44:9:5:4:41:21.95%:29:1.1955E-3:46:32:12:20:49 0/0:37:5:3:2:23:21.74%:14:2.4548E-2:41:18:7:11:24 0/1:35:12:7:5:45:26.67%:39:1.05E-4:39:33:12:21:57 0/0:35:2:1:1:27:7.41%:34:2.4528E-1:41:25:12:13:32 0/1:37:10:6:4:45:22.22%:32:5.5766E-4:42:35:18:17:48 0/0:37:5:3:2:27:18.52%:19:2.5527E-2:41:22:11:11:30 0/1:33:7:0:7:31:22.58%:22:5.3469E-3:37:24:12:12:36 0/1:37:9:5:4:32:28.12%:29:1.0185E-3:37:23:9:14:41 0/0:35:3:2:1:25:12%:25:1.1735E-1:39:22:7:15:33 0/1:35:12:7:5:47:25.53%:39:1.0942E-4:40:35:15:20:58 0/0:31:6:5:1:40:15%:30:1.2773E-2:40:34:17:17:49 0/1:35:14:8:6:49:28.57%:46:2.0696E-5:40:35:14:21:59 0/1:36:7:5:2:29:24.14%:22:5.1909E-3:36:22:12:10:32 0/0:38:2:1:1:26:7.69%:30:2.451E-1:40:24:10:14:30 0/0:36:3:3:0:17:17.65%:14:1.1364E-1:40:14:7:7:22 0/0:60:1:1:0:22:4.55%:31:5E-1:37:21:9:12:26 0/1:36:11:5:6:45:24.44%:36:2.4398E-4:39:34:18:16:52 0/1:40:8:3:5:42:19.05%:25:2.7074E-3:40:34:13:21:48 0/1:41:15:9:6:54:27.78%:50:9.8829E-6:42:39:16:23:65 0/1:37:15:10:5:42:35.71%:51:6.6622E-6:40:27:9:18:50 0/0:36:6:3:3:40:15%:30:1.2773E-2:39:34:12:22:47 0/0:34:6:4:2:25:24%:11:1.0968E-2:37:18:10:8:35 0/0:35:4:1:3:19:21.05%:13:5.251E-2:39:15:6:9:21 0/1:33:11:4:7:40:27.5%:36:2.2064E-4:37:29:13:16:50 0/0:36:5:4:1:38:13.16%:32:2.7169E-2:37:33:13:20:51 0/1:35:9:5:4:46:19.57%:28:1.2682E-3:40:37:17:20:55 0/1:33:9:5:4:30:30%:30:9.678E-4:40:21:10:11:35 0/1:33:8:4:4:34:23.53%:26:2.4562E-3:39:26:15:11:40 0/0:29:3:1:2:22:13.64%:19:1.1628E-1:41:19:9:10:29 0/0:33:5:3:2:45:11.11%:44:2.7799E-2:38:40:20:20:52 0/1:36:13:10:3:44:29.55%:43:4.324E-5:38:31:14:17:55 0/0:38:5:3:2:31:16.13%:24:2.6257E-2:43:26:13:13:38 0/0:31:2:1:1:17:11.76%:18:2.4242E-1:37:15:6:9:21 0/1:35:12:4:8:43:27.91%:39:1.0032E-4:36:31:13:18:54 0/0:33:6:6:0:39:15.38%:31:1.2702E-2:39:33:16:17:49 0/1:35:7:2:5:34:20.59%:22:5.5492E-3:38:27:11:16:43 0/1:35:8:7:1:36:22.22%:25:2.5282E-3:35:28:16:12:41 0/0:34:3:3:0:37:8.11%:43:1.1986E-1:36:34:18:16:51 0/1:35:11:7:4:41:26.83%:36:2.2563E-4:36:30:10:20:54 0/1:32:13:6:7:46:28.26%:43:4.5578E-5:35:33:15:18:53 0/0:35:5:4:1:37:13.51%:32:2.706E-2:36:32:16:16:47 0/1:33:7:2:5:37:18.92%:22:5.721E-3:39:30:15:15:45 0/1:35:10:7:3:30:33.33%:33:3.9851E-4:37:20:5:15:36 0/1:33:7:5:2:31:22.58%:22:5.3469E-3:37:24:6:18:38 0/1:35:7:5:2:24:29.17%:23:4.7006E-3:39:17:5:12:30 0/1:42:7:6:1:40:17.5%:22:5.8688E-3:39:33:16:17:46 0/1:36:19:11:8:66:28.79%:63:4.1996E-7:38:47:19:28:85 0/1:37:9:7:2:53:16.98%:28:1.3495E-3:40:44:19:25:61 0/1:41:11:6:5:57:19.3%:35:2.8674E-4:41:46:23:23:64 0/1:40:8:4:4:37:21.62%:25:2.5617E-3:40:29:9:20:50 0/0:33:2:0:2:33:6.06%:44:2.4615E-1:39:31:15:16:37 0/1:35:7:5:2:38:18.42%:22:5.7727E-3:38:31:14:17:45 0/0:31:3:2:1:33:9.09%:37:1.1923E-1:41:30:14:16:40 0/0:34:5:4:1:38:13.16%:32:2.7169E-2:40:33:19:14:48 0/0:30:2:2:0:35:5.71%:47:2.4638E-1:40:33:14:19:47 0/0:33:5:3:2:26:19.23%:17:2.5076E-2:39:20:8:12:31 0/1:34:8:6:2:46:17.39%:25:2.8033E-3:40:38:17:21:57 0/0:33:4:1:3:40:10%:40:5.7784E-2:39:36:14:22:49 0/1:33:7:3:4:47:14.89%:22:6.1442E-3:38:40:18:22:51 0/0:30:5:4:1:44:11.36%:41:2.7721E-2:39:39:19:20:49 MTB_anc 2163421 . C G . PASS AC=76;AF=0.253;AN=300;ANN=G|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3891G>C|p.Thr1297Thr|3891/4380|3891/4380|1297/1459||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163421C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163421C>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:6:3:3:30:20%:18:1.186E-2:42:24:13:11:31 0/0:44:2:1:1:20:10%:21:2.4359E-1:52:18:10:8:21 0/1:35:14:10:4:66:21.21%:45:2.8272E-5:42:52:18:34:78 0/0:55:5:2:3:35:14.29%:30:2.6822E-2:42:30:11:19:36 0/1:45:7:3:4:36:19.44%:22:5.6667E-3:44:29:15:14:39 0/0:44:6:3:3:31:19.35%:20:1.1977E-2:44:25:12:13:32 0/1:40:8:3:5:31:25.81%:26:2.3332E-3:47:23:10:13:34 0/1:38:9:3:6:37:24.32%:29:1.1256E-3:44:28:15:13:40 0/1:50:9:4:5:60:15%:28:1.4138E-3:43:51:25:26:65 0/1:41:8:3:5:40:20%:25:2.653E-3:48:32:16:16:45 0/0:41:6:5:1:43:13.95%:36:1.2967E-2:49:37:20:17:47 0/0:43:3:1:2:37:8.11%:43:1.1986E-1:43:34:15:19:44 0/1:43:8:5:3:37:21.62%:25:2.5617E-3:47:29:17:12:40 0/1:37:10:7:3:50:20%:32:5.9342E-4:42:40:18:22:54 0/0:47:4:3:1:25:16%:21:5.4928E-2:44:21:8:13:33 0/1:44:10:4:6:37:27.03%:33:4.8486E-4:41:27:14:13:40 0/0:55:5:4:1:32:15.62%:24:2.6412E-2:45:27:10:17:36 0/0:34:3:1:2:15:20%:11:1.1207E-1:47:12:5:7:18 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:24 0/0:47:6:5:1:32:18.75%:20:1.2087E-2:50:26:12:14:37 0/0:35:2:2:0:19:10.53%:21:2.4324E-1:41:17:6:11:19 0/0:37:6:4:2:53:11.32%:50:1.3458E-2:42:47:24:23:58 0/0:60:3:2:1:26:11.54%:25:1.1765E-1:44:23:10:13:28 0/1:39:7:4:3:47:14.89%:22:6.1442E-3:41:40:18:22:52 0/1:43:9:2:7:39:23.08%:29:1.162E-3:42:30:11:19:44 0/1:40:11:4:7:45:24.44%:36:2.4398E-4:42:34:13:21:49 0/1:43:7:4:3:25:28%:23:4.8126E-3:39:18:7:11:31 0/1:40:8:6:2:33:24.24%:26:2.4173E-3:45:25:14:11:37 0/0:33:2:2:0:30:6.67%:37:2.4576E-1:41:28:10:18:36 0/0:42:3:3:0:34:8.82%:37:1.194E-1:39:31:11:20:41 0/1:41:14:7:7:42:33.33%:47:1.6656E-5:43:28:13:15:47 0/1:42:10:7:3:40:25%:32:5.1483E-4:43:30:15:15:48 0/0:51:6:3:3:38:15.79%:28:1.2628E-2:46:32:15:17:40 0/1:47:8:5:3:30:26.67%:26:2.2875E-3:46:22:13:9:30 0/1:42:7:4:3:42:16.67%:22:5.9563E-3:43:35:17:18:50 0/1:37:7:3:4:43:16.28%:22:5.9563E-3:40:35:18:17:48 0/1:41:9:7:2:41:21.95%:29:1.1955E-3:40:32:18:14:47 0/1:31:8:7:1:72:11.11%:24:3.1718E-3:46:63:35:28:77 0/1:37:12:8:4:56:21.43%:38:1.2642E-4:44:44:26:18:65 0/0:33:4:2:2:34:11.76%:31:5.6946E-2:42:30:11:19:38 0/1:34:11:5:6:45:24.44%:36:2.4398E-4:40:34:18:16:52 0/1:37:10:4:6:60:16.67%:31:6.4957E-4:41:50:26:24:69 0/1:34:10:6:4:46:21.74%:32:5.6532E-4:44:36:19:17:48 0/0:37:4:1:3:27:14.81%:23:5.5494E-2:42:23:12:11:29 0/1:42:11:8:3:45:24.44%:36:2.4398E-4:45:34:16:18:53 0/0:33:6:3:3:37:16.22%:28:1.2549E-2:42:31:17:14:49 0/1:43:10:6:4:36:27.78%:33:4.7404E-4:47:26:9:17:42 0/1:41:17:10:7:55:30.91%:57:1.768E-6:41:38:13:25:64 0/1:41:12:7:5:56:21.43%:38:1.2642E-4:41:44:16:28:64 0/0:35:6:3:3:47:12.77%:42:1.3188E-2:42:41:17:24:51 0/1:48:7:4:3:25:28%:23:4.8126E-3:42:18:8:10:31 0/1:38:11:7:4:44:25%:36:2.3962E-4:42:33:18:15:51 0/0:43:4:3:1:21:19.05%:15:5.3471E-2:39:17:9:8:24 0/0:39:6:5:1:34:17.65%:23:1.2287E-2:44:28:11:17:35 0/0:32:2:0:2:29:6.9%:37:2.4561E-1:41:27:13:14:36 0/1:35:9:5:4:47:19.15%:28:1.2811E-3:42:38:15:23:56 0/1:34:12:8:4:43:27.91%:39:1.0032E-4:43:31:6:25:52 0/1:39:11:4:7:34:32.35%:37:1.8662E-4:45:23:15:8:38 0/1:39:10:6:4:47:21.28%:32:5.7272E-4:42:37:19:18:49 0/1:43:8:4:4:49:16.33%:25:2.8658E-3:44:41:20:21:52 0/0:45:3:2:1:28:10.71%:28:1.1818E-1:45:25:11:14:31 0/0:32:4:1:3:25:16%:21:5.4928E-2:45:21:12:9:31 0/1:37:9:5:4:49:18.37%:28:1.3055E-3:40:40:22:18:59 0/0:42:4:3:1:31:12.9%:29:5.6405E-2:47:27:16:11:36 0/0:43:3:2:1:42:7.14%:49:1.2048E-1:40:39:21:18:45 0/1:34:9:7:2:52:17.31%:28:1.3391E-3:45:43:25:18:60 0/0:38:4:3:1:23:17.39%:18:5.4264E-2:38:19:9:10:30 0/0:39:4:2:2:46:8.7%:49:5.8402E-2:43:42:22:20:52 0/0:34:3:3:0:23:13.04%:22:1.1667E-1:48:20:6:14:24 0/0:43:4:2:2:45:8.89%:46:5.8215E-2:42:40:17:23:49 0/0:34:4:3:1:38:10.53%:37:5.7534E-2:44:34:13:21:41 0/0:38:6:4:2:39:15.38%:31:1.2702E-2:47:33:12:21:42 0/0:50:5:2:3:26:19.23%:17:2.531E-2:45:21:9:12:27 0/0:36:3:1:2:37:8.11%:43:1.1986E-1:48:34:18:16:40 0/0:40:6:1:5:46:13.04%:39:1.3136E-2:44:40:18:22:61 0/0:41:5:2:3:38:13.16%:32:2.706E-2:47:32:13:19:41 0/0:33:5:3:2:38:13.16%:32:2.7169E-2:42:33:14:19:42 0/0:35:3:2:1:39:7.69%:47:1.2013E-1:43:36:15:21:43 0/1:46:7:3:4:39:17.95%:22:5.8219E-3:42:32:15:17:41 0/1:36:10:6:4:41:24.39%:32:5.2405E-4:44:31:16:15:48 0/1:39:10:7:3:42:23.81%:32:5.3293E-4:40:32:12:20:51 0/1:39:9:6:3:52:17.31%:28:1.3391E-3:42:43:22:21:63 0/0:36:6:4:2:46:13.04%:39:1.3136E-2:43:40:17:23:52 0/0:48:5:3:2:35:14.29%:30:2.6822E-2:44:30:13:17:38 0/0:41:3:3:0:22:13.64%:19:1.1628E-1:43:19:8:11:25 0/1:37:8:7:1:23:34.78%:27:1.8791E-3:37:15:3:12:26 0/1:40:8:3:5:34:23.53%:26:2.4562E-3:43:26:12:14:41 0/0:44:6:5:1:23:26.09%:11:1.0777E-2:46:17:7:10:27 0/1:38:8:5:3:51:15.69%:25:2.9037E-3:45:43:19:24:54 0/0:33:3:0:3:32:9.38%:34:1.1905E-1:44:29:15:14:36 0/1:46:8:5:3:45:17.78%:25:2.7808E-3:43:37:14:23:49 0/0:37:5:3:2:25:20%:17:2.5076E-2:41:20:9:11:25 0/1:37:9:6:3:50:18%:28:1.3171E-3:39:41:13:28:58 0/0:37:2:1:1:30:6.67%:37:2.4576E-1:41:28:13:15:32 0/1:35:12:7:5:46:26.09%:39:1.0724E-4:44:34:17:17:48 0/0:36:5:3:2:28:17.86%:19:2.5729E-2:42:23:12:11:30 0/1:37:7:1:6:29:24.14%:22:5.1909E-3:39:22:10:12:37 0/1:38:7:5:2:30:23.33%:22:5.2713E-3:40:23:8:15:41 0/0:32:6:4:2:28:21.43%:16:1.1603E-2:41:22:7:15:33 0/1:36:11:8:3:46:23.91%:36:2.4819E-4:41:35:13:22:57 0/1:32:8:5:3:38:21.05%:25:2.5935E-3:42:30:13:17:49 0/1:34:13:8:5:51:25.49%:42:5.092E-5:41:38:16:22:61 0/0:36:6:5:1:28:21.43%:16:1.1603E-2:38:22:11:11:32 0/0:36:3:2:1:28:10.71%:28:1.1818E-1:40:25:10:15:30 0/0:36:3:3:0:21:14.29%:19:1.1585E-1:40:18:9:9:24 0/0:45:2:1:1:24:8.33%:27:2.4468E-1:39:22:10:12:26 0/1:43:8:6:2:48:16.67%:25:2.8457E-3:40:40:21:19:55 0/1:39:9:3:6:42:21.43%:29:1.2112E-3:42:33:12:21:46 0/1:40:14:8:6:57:24.56%:46:2.4613E-5:42:43:16:27:66 0/1:36:16:10:6:42:38.1%:55:2.607E-6:42:26:8:18:50 0/1:34:7:4:3:42:16.67%:22:5.9563E-3:39:35:12:23:47 0/0:32:6:4:2:25:24%:14:1.1145E-2:37:19:11:8:34 0/0:36:3:1:2:19:15.79%:17:1.1486E-1:42:16:6:10:22 0/1:33:11:3:8:40:27.5%:36:2.2064E-4:41:29:14:15:51 0/1:35:7:4:3:44:15.91%:22:6.0363E-3:37:37:12:25:52 0/1:37:7:4:3:44:15.91%:22:6.0363E-3:41:37:16:21:55 0/1:36:7:3:4:29:24.14%:22:5.1909E-3:41:22:10:12:37 0/0:37:6:4:2:33:18.18%:23:1.219E-2:41:27:13:14:41 0/0:29:2:1:1:23:8.7%:28:2.4444E-1:42:21:9:12:29 0/0:37:3:2:1:41:7.32%:50:1.2037E-1:39:38:19:19:52 0/1:35:15:10:5:49:30.61%:50:8.6234E-6:37:34:15:19:56 0/0:44:5:4:1:32:15.62%:24:2.6257E-2:43:26:13:13:38 0/0:30:3:1:2:16:18.75%:11:1.129E-1:36:13:4:9:21 0/1:33:12:5:7:47:25.53%:39:1.0942E-4:37:35:16:19:57 0/0:36:6:6:0:41:14.63%:33:1.2841E-2:40:35:16:19:48 0/0:32:6:3:3:34:17.65%:23:1.2287E-2:40:28:10:18:42 0/1:36:8:7:1:35:22.86%:26:2.4931E-3:37:27:13:14:42 0/0:33:5:4:1:35:14.29%:30:2.6822E-2:38:30:15:15:48 0/1:36:12:7:5:46:26.09%:39:1.0724E-4:38:34:12:22:54 0/1:36:12:6:6:45:26.67%:39:1.05E-4:38:33:15:18:53 0/0:36:6:4:2:43:13.95%:36:1.2967E-2:37:37:20:17:48 0/0:33:5:2:3:34:14.71%:27:2.6693E-2:39:29:15:14:46 0/1:35:9:6:3:30:30%:30:9.678E-4:39:21:6:15:37 0/1:34:7:5:2:34:20.59%:22:5.5492E-3:37:27:9:18:39 0/0:34:6:6:0:24:25%:11:1.0968E-2:40:18:6:12:30 0/1:41:8:6:2:42:19.05%:25:2.6808E-3:40:33:15:18:45 0/1:35:25:14:11:74:33.78%:85:2.5839E-9:38:49:20:29:86 0/1:38:9:7:2:57:15.79%:28:1.388E-3:41:48:20:28:64 0/1:41:11:6:5:54:20.37%:35:2.7747E-4:43:43:20:23:65 0/1:40:9:5:4:43:20.93%:29:1.2263E-3:39:34:11:23:51 0/0:32:2:0:2:33:6.06%:44:2.4615E-1:40:31:15:16:39 0/0:35:6:5:1:38:15.79%:28:1.2628E-2:39:32:14:18:44 0/0:33:3:2:1:33:9.09%:37:1.1923E-1:41:30:13:17:38 0/0:34:5:4:1:40:12.5%:35:2.7371E-2:40:35:19:16:48 0/0:32:5:5:0:40:12.5%:35:2.7371E-2:40:35:15:20:48 0/0:33:5:4:1:28:17.86%:19:2.5729E-2:39:23:8:15:31 0/1:34:8:7:1:53:15.09%:25:2.9389E-3:38:45:22:23:59 0/0:34:4:2:2:45:8.89%:46:5.8215E-2:40:40:18:22:50 0/1:35:8:3:5:46:17.39%:25:2.8033E-3:39:38:17:21:50 0/0:30:6:4:2:44:13.64%:36:1.3026E-2:41:38:19:19:48 MTB_anc 2163444 . T C . PASS AC=144;AF=0.480;AN=300;ANN=C|missense_variant|MODERATE|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3868A>G|p.Asn1290Asp|3868/4380|3868/4380|1290/1459||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163444T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163444T>C||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:9:4:5:30:30%:30:9.678E-4:43:21:11:10:38 0/1:50:9:3:6:23:39.13%:31:7.4174E-4:51:14:8:6:25 0/1:40:30:12:18:73:41.1%:99:2.1366E-11:43:43:15:28:84 0/1:41:11:3:8:32:34.38%:37:1.7351E-4:46:21:7:14:35 0/1:43:15:8:7:40:37.5%:52:6.0618E-6:47:25:11:14:44 0/1:43:9:3:6:27:33.33%:30:8.8132E-4:43:18:9:9:27 0/1:43:14:7:7:32:43.75%:50:9.8512E-6:43:18:5:13:35 0/1:40:13:5:8:38:34.21%:44:3.5456E-5:44:25:13:12:41 0/1:48:18:10:8:63:28.57%:60:9.255E-7:46:45:20:25:68 0/1:44:18:4:14:40:45%:64:3.1919E-7:49:22:13:9:44 0/1:49:10:7:3:49:20.41%:32:5.8675E-4:51:39:17:22:55 0/1:41:15:4:11:38:39.47%:52:5.4463E-6:45:23:13:10:43 0/1:42:11:4:7:42:26.19%:36:2.3046E-4:50:31:18:13:48 0/1:37:22:10:12:47:46.81%:80:9.3895E-9:45:25:13:12:60 0/1:42:10:3:7:29:34.48%:34:3.8387E-4:45:19:6:13:35 0/1:41:13:3:10:39:33.33%:44:3.6837E-5:45:26:15:11:44 0/1:42:17:7:10:35:48.57%:62:5.7598E-7:45:18:7:11:37 0/0:48:5:3:2:16:31.25%:6:2.1691E-2:40:11:2:9:20 0/1:40:9:7:2:24:37.5%:31:7.7962E-4:46:15:7:8:28 0/1:50:11:5:6:35:31.43%:37:1.9282E-4:46:24:12:12:39 0/1:42:6:3:3:17:35.29%:20:9.2021E-3:48:11:3:8:20 0/1:38:22:10:12:49:44.9%:79:1.1173E-8:45:27:15:12:57 0/1:52:10:5:5:30:33.33%:33:3.9851E-4:41:20:7:13:32 0/1:42:13:3:10:48:27.08%:43:4.7798E-5:43:35:18:17:57 0/1:42:16:5:11:39:41.03%:56:2.1927E-6:45:23:9:14:45 0/1:43:24:7:17:48:50%:89:1.2355E-9:40:24:11:13:56 0/1:41:8:3:5:37:21.62%:25:2.5617E-3:44:29:11:18:39 0/1:46:18:11:7:34:52.94%:67:1.7305E-7:40:16:7:9:40 0/1:42:7:2:5:27:25.93%:22:5.0143E-3:42:20:11:9:31 0/1:40:13:5:8:33:39.39%:45:2.8029E-5:40:20:7:13:41 0/1:42:22:10:12:48:45.83%:79:1.0268E-8:43:26:12:14:50 0/1:42:22:13:9:44:50%:81:6.9407E-9:44:22:7:15:50 0/1:44:15:6:9:40:37.5%:52:6.0618E-6:47:25:11:14:40 0/1:44:11:8:3:33:33.33%:37:1.8019E-4:43:22:12:10:35 0/1:44:13:6:7:49:26.53%:43:4.8866E-5:42:36:14:22:55 0/1:43:18:9:9:44:40.91%:63:4.2568E-7:41:26:11:15:49 0/1:39:16:10:6:41:39.02%:56:2.4696E-6:44:25:12:13:52 0/1:44:23:13:10:66:34.85%:79:1.1634E-8:44:43:24:19:81 0/1:41:17:14:3:58:29.31%:57:1.9326E-6:46:41:14:27:65 0/1:38:12:4:8:36:33.33%:40:8.1472E-5:43:24:7:17:42 0/1:38:26:13:13:49:53.06%:98:1.5284E-10:42:23:10:13:53 0/1:44:28:15:13:63:45.16%:99:7.0184E-11:40:34:13:21:71 0/1:44:15:9:6:42:35.71%:51:6.6622E-6:44:27:11:16:51 0/1:42:14:7:7:29:48.28%:51:7.6466E-6:40:15:6:9:35 0/1:41:14:7:7:48:29.17%:46:2.0156E-5:46:34:14:20:55 0/1:39:18:3:15:42:42.86%:64:3.7193E-7:42:24:13:11:49 0/1:47:11:4:7:34:32.35%:37:1.8662E-4:49:23:8:15:42 0/1:44:18:8:10:57:31.58%:61:7.7462E-7:43:39:16:23:68 0/1:41:26:10:16:55:47.27%:95:2.9965E-10:44:29:11:18:64 0/1:40:15:3:12:49:31.25%:50:8.3573E-6:43:33:16:17:53 0/1:45:9:5:4:26:34.62%:30:8.4928E-4:45:17:8:9:33 0/1:37:23:9:14:45:51.11%:85:2.6125E-9:44:22:11:11:54 0/1:38:10:7:3:24:41.67%:35:2.9985E-4:43:14:5:9:28 0/1:48:10:4:6:30:33.33%:33:3.9851E-4:44:20:9:11:33 0/1:42:12:6:6:34:35.29%:41:7.5302E-5:42:22:9:13:39 0/1:41:19:8:11:48:39.58%:66:2.0555E-7:41:29:15:14:63 0/1:40:14:5:9:45:31.11%:47:1.8462E-5:45:31:11:20:57 0/1:46:10:6:4:37:27.03%:33:4.8486E-4:42:27:11:16:42 0/1:37:14:6:8:43:32.56%:47:1.727E-5:44:29:16:13:50 0/1:41:19:7:12:57:33.33%:65:3.1469E-7:43:38:16:22:59 0/1:45:9:3:6:26:34.62%:30:8.4928E-4:48:17:8:9:33 0/1:41:8:2:6:26:30.77%:26:2.076E-3:42:18:10:8:34 0/1:44:18:10:8:55:32.73%:61:7.2242E-7:42:37:20:17:66 0/1:43:16:10:6:36:44.44%:57:1.7753E-6:44:20:10:10:39 0/1:41:26:14:12:37:70.27%:99:1.294E-11:41:11:6:5:40 0/1:41:21:13:8:53:39.62%:73:3.9927E-8:39:32:16:16:64 0/1:40:11:4:7:26:42.31%:38:1.2791E-4:42:15:8:7:30 0/1:40:17:8:9:50:34%:58:1.4808E-6:40:33:15:18:57 0/0:46:5:1:4:22:22.73%:12:2.4248E-2:45:17:7:10:26 0/1:41:16:8:8:46:34.78%:55:3.1446E-6:44:30:13:17:49 0/1:40:15:5:10:39:38.46%:52:5.7558E-6:46:24:8:16:43 0/1:43:19:9:10:36:52.78%:71:7.3012E-8:49:17:4:13:42 0/0:40:5:3:2:26:19.23%:17:2.531E-2:46:21:10:11:30 0/1:41:16:9:7:40:40%:56:2.3315E-6:50:24:11:13:42 0/1:37:16:6:10:52:30.77%:54:3.905E-6:43:36:13:23:63 0/1:43:17:7:10:41:41.46%:60:9.3546E-7:47:24:13:11:44 0/1:44:16:8:8:37:43.24%:57:1.9143E-6:44:21:10:11:42 0/1:43:16:6:10:37:43.24%:57:1.9143E-6:47:21:12:9:42 0/1:41:16:8:8:38:42.11%:56:2.0535E-6:42:22:10:12:41 0/1:40:18:10:8:44:40.91%:63:4.2568E-7:41:26:12:14:52 0/1:36:17:7:10:52:32.69%:57:1.5975E-6:43:35:10:25:59 0/1:39:19:14:5:60:31.67%:64:3.5049E-7:44:41:21:20:66 0/1:38:21:12:9:44:47.73%:76:2.0219E-8:40:23:11:12:54 0/1:43:16:8:8:32:50%:59:1.2304E-6:47:16:8:8:36 0/0:40:6:3:3:21:28.57%:9:1.0344E-2:48:15:6:9:24 0/1:36:14:6:8:29:48.28%:51:7.6466E-6:39:15:5:10:33 0/1:39:17:6:11:42:40.48%:60:9.9678E-7:47:25:15:10:47 0/1:41:11:2:9:25:44%:39:1.1933E-4:43:14:8:6:29 0/1:40:16:5:11:47:34.04%:54:3.2755E-6:46:31:14:17:53 0/1:40:16:7:9:32:50%:59:1.2304E-6:42:16:6:10:34 0/1:42:21:10:11:46:45.65%:76:2.4256E-8:46:25:9:16:49 0/1:42:8:2:6:27:29.63%:26:2.1337E-3:46:19:9:10:28 0/1:37:18:3:15:51:35.29%:62:6.1577E-7:41:33:14:19:60 0/1:43:13:6:7:31:41.94%:46:2.4825E-5:41:18:8:10:36 0/1:43:24:14:10:42:57.14%:92:5.5097E-10:42:18:8:10:49 0/1:40:13:6:7:28:46.43%:47:1.9812E-5:43:15:9:6:33 0/1:36:12:1:11:35:34.29%:41:7.8434E-5:46:23:13:10:39 0/1:41:12:3:9:32:37.5%:41:6.8751E-5:41:20:10:10:41 0/1:36:10:3:7:27:37.04%:34:3.5253E-4:41:17:7:10:33 0/1:39:25:10:15:51:49.02%:92:5.8079E-10:42:26:12:14:59 0/1:39:16:7:9:40:40%:56:2.3315E-6:45:24:8:16:49 0/1:37:20:7:13:54:37.04%:69:1.0949E-7:41:34:14:20:64 0/1:37:13:7:6:32:40.62%:45:2.6443E-5:38:19:13:6:36 0/1:38:12:4:8:29:41.38%:42:5.8193E-5:38:17:8:9:31 0/0:34:5:2:3:27:18.52%:19:2.5527E-2:42:22:14:8:31 0/1:45:10:6:4:25:40%:34:3.1821E-4:43:15:4:11:28 0/1:38:26:12:14:50:52%:97:1.7375E-10:39:24:8:16:57 0/1:44:22:7:15:45:48.89%:81:7.724E-9:44:23:10:13:50 0/1:41:17:7:10:63:26.98%:56:2.193E-6:43:46:17:29:70 0/1:39:14:8:6:50:28%:46:2.1224E-5:40:36:15:21:56 0/1:36:17:4:13:40:42.5%:60:8.743E-7:44:23:9:14:46 0/1:37:11:4:7:29:37.93%:38:1.4422E-4:38:17:9:8:35 0/1:37:14:4:10:24:60.87%:54:3.4067E-6:38:9:4:5:29 0/1:41:13:4:9:43:30.23%:43:4.2025E-5:40:30:9:21:54 0/1:35:16:3:13:49:32.65%:54:3.5325E-6:40:33:16:17:57 0/1:36:16:5:11:51:31.37%:54:3.7826E-6:41:35:19:16:60 0/1:37:12:3:9:34:35.29%:41:7.5302E-5:45:22:9:13:40 0/1:38:12:5:7:37:32.43%:40:8.4418E-5:42:25:11:14:46 0/1:42:7:3:4:24:29.17%:23:4.7006E-3:39:17:7:10:29 0/1:39:23:11:12:44:52.27%:86:2.3136E-9:39:21:9:12:52 0/1:35:17:6:11:57:29.82%:57:1.8784E-6:38:40:14:26:67 0/1:43:13:5:8:33:39.39%:45:2.8029E-5:40:20:9:11:42 0/0:35:4:2:2:18:22.22%:10:5.1948E-2:39:14:6:8:24 0/1:36:21:7:14:49:42.86%:75:3.0726E-8:41:28:11:17:57 0/1:36:18:6:12:45:40%:63:4.5278E-7:40:27:17:10:52 0/1:36:15:4:11:37:40.54%:52:5.1339E-6:41:22:10:12:42 0/1:35:9:5:4:36:25%:29:1.1061E-3:40:27:17:10:42 0/1:35:11:5:6:47:23.4%:35:2.5227E-4:37:36:19:17:54 0/1:36:22:6:16:49:44.9%:79:1.1173E-8:40:27:11:16:57 0/1:36:18:5:13:49:36.73%:62:5.6162E-7:41:31:15:16:59 0/1:36:16:3:13:37:43.24%:57:1.9143E-6:43:21:14:7:43 0/1:36:18:6:12:48:37.5%:62:5.3443E-7:37:30:14:16:56 0/1:39:10:2:8:29:34.48%:34:3.8387E-4:42:19:9:10:41 0/1:35:9:1:8:38:23.68%:29:1.1442E-3:39:29:10:19:44 0/1:36:14:4:10:27:51.85%:52:6.1806E-6:39:13:4:9:36 0/1:38:14:6:8:39:35.9%:48:1.4735E-5:43:25:15:10:48 0/1:38:28:13:15:74:37.84%:98:1.5731E-10:37:46:18:28:87 0/1:38:29:12:17:66:43.94%:99:3.5024E-11:40:37:16:21:69 0/1:43:18:11:7:56:32.14%:61:7.4863E-7:44:38:17:21:68 0/1:37:21:4:17:47:44.68%:75:2.6363E-8:42:26:13:13:54 0/1:44:15:5:10:39:38.46%:52:5.7558E-6:40:24:16:8:43 0/1:35:15:3:12:36:41.67%:53:4.8188E-6:45:21:11:10:48 0/1:42:14:7:7:35:40%:49:1.2005E-5:41:21:8:13:39 0/1:40:15:8:7:45:33.33%:51:7.5306E-6:40:30:12:18:56 0/1:37:14:7:7:35:40%:49:1.2005E-5:39:21:8:13:46 0/1:43:10:5:5:30:33.33%:33:3.9851E-4:41:20:8:12:33 0/1:38:18:7:11:49:36.73%:62:5.6162E-7:43:31:15:16:59 0/1:39:14:5:9:44:31.82%:47:1.7873E-5:40:30:10:20:52 0/1:39:21:8:13:48:43.75%:75:2.8521E-8:39:27:15:12:55 0/1:40:14:5:9:44:31.82%:47:1.7873E-5:41:30:16:14:52 MTB_anc 2163493 . A G . PASS AC=31;AF=0.103;AN=300;ANN=G|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3819T>C|p.Ala1273Ala|3819/4380|3819/4380|1273/1459||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163493A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163493A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:7:1:6:35:20%:22:5.6095E-3:44:28:15:13:35 0/0:49:3:3:0:16:18.75%:11:1.129E-1:53:13:6:7:17 0/0:37:5:0:5:52:9.62%:52:2.8261E-2:43:47:13:34:53 0/0:38:4:1:3:27:14.81%:23:5.5494E-2:48:23:10:13:28 0/0:49:2:1:1:32:6.25%:40:2.4603E-1:47:30:18:12:33 0/0:49:2:1:1:17:11.76%:18:2.4242E-1:41:15:7:8:17 0/0:45:3:1:2:25:12%:25:1.1735E-1:45:22:10:12:26 0/0:38:4:0:4:31:12.9%:29:5.6405E-2:46:27:13:14:31 0/0:38:3:1:2:49:6.12%:63:1.2113E-1:47:46:18:28:50 0/0:49:4:0:4:32:12.5%:29:5.6596E-2:49:28:14:14:32 0/0:38:2:0:2:47:4.26%:67:2.4731E-1:47:45:17:28:48 0/1:38:8:2:6:35:22.86%:26:2.4931E-3:44:27:15:12:35 0/0:39:4:0:4:33:12.12%:32:5.6777E-2:47:29:17:12:34 0/0:35:6:1:5:40:15%:30:1.2773E-2:41:34:13:21:41 0/0:42:3:0:3:22:13.64%:19:1.1628E-1:43:19:8:11:22 0/1:46:7:1:6:35:20%:22:5.6095E-3:44:28:17:11:38 0/0:37:5:1:4:21:23.81%:12:2.3921E-2:42:16:4:12:21 0/0:36:2:1:1:15:13.33%:16:2.4138E-1:41:13:1:12:15 0/0:36:2:2:0:23:8.7%:28:2.4444E-1:44:21:8:13:23 0/0:60:2:0:2:24:8.33%:27:2.4468E-1:46:22:10:12:26 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:46:15:6:9:17 0/0:41:5:3:2:42:11.9%:38:2.7555E-2:44:37:18:19:45 0/0:36:3:1:2:26:12%:25:1.1735E-1:44:22:9:13:27 0/0:38:4:2:2:40:10%:40:5.7784E-2:46:36:20:16:42 0/0:46:4:1:3:30:13.33%:26:5.62E-2:42:26:8:18:30 0/0:39:5:1:4:34:14.71%:27:2.6693E-2:43:29:13:16:35 0/0:35:2:0:2:28:7.14%:34:2.4545E-1:47:26:8:18:30 0/0:36:4:3:1:25:16%:21:5.4928E-2:43:21:9:12:26 0/0:36:2:0:2:22:9.09%:24:2.4419E-1:46:20:11:9:22 0/1:40:8:3:5:29:27.59%:26:2.2392E-3:42:21:7:14:30 0/0:37:4:2:2:31:12.9%:29:5.6405E-2:45:27:10:17:31 0/0:41:5:1:4:26:19.23%:17:2.531E-2:46:21:6:15:26 0/0:38:3:2:1:33:9.09%:37:1.1923E-1:47:30:15:15:33 0/0:45:3:2:1:25:12.5%:22:1.1702E-1:44:21:10:11:25 0/0:45:6:3:3:41:14.63%:33:1.2841E-2:46:35:14:21:41 0/0:41:6:3:3:30:20%:18:1.186E-2:47:24:10:14:30 0/0:35:5:4:1:31:16.13%:24:2.6257E-2:44:26:11:15:31 0/1:41:14:9:5:64:21.88%:45:2.7518E-5:47:50:25:25:65 0/0:40:6:5:1:44:13.64%:36:1.3026E-2:45:38:14:24:46 0/0:38:1:0:1:25:4%:38:5E-1:44:24:7:17:26 0/1:37:7:2:5:30:23.33%:22:5.2713E-3:45:23:12:11:30 0/1:42:11:5:6:48:23.4%:35:2.5227E-4:40:36:15:21:49 0/0:41:4:2:2:36:11.11%:34:5.7257E-2:45:32:14:18:36 0/0:38:4:2:2:20:20%:13:5.3015E-2:45:16:5:11:20 0/0:36:3:2:1:36:8.33%:40:1.1972E-1:44:33:11:22:37 0/1:41:7:1:6:33:21.21%:22:5.4855E-3:45:26:15:11:34 0/0:49:2:1:1:25:8.33%:27:2.4468E-1:48:22:8:14:25 0/0:45:6:2:4:41:14.63%:33:1.2841E-2:41:35:11:24:42 0/1:40:12:6:6:39:30.77%:40:9.0046E-5:46:27:11:16:39 0/0:37:6:0:6:43:14.29%:33:1.2905E-2:45:36:13:23:43 0/0:51:3:0:3:18:16.67%:14:1.1429E-1:51:15:5:10:20 0/0:41:5:3:2:28:17.86%:19:2.5729E-2:44:23:10:13:28 0/0:38:1:0:1:21:4.76%:31:5E-1:48:20:7:13:21 0/0:38:2:0:2:26:7.69%:30:2.451E-1:46:24:10:14:26 0/0:36:4:0:4:29:13.79%:26:5.5981E-2:43:25:10:15:30 0/1:42:7:3:4:44:15.91%:22:6.0363E-3:39:37:12:25:45 0/0:40:4:1:3:39:10.26%:41:5.7662E-2:42:35:8:27:39 0/0:30:1:0:1:22:4.55%:31:5E-1:44:21:12:9:23 0/0:38:3:2:1:33:9.09%:37:1.1923E-1:44:30:15:15:33 0/0:42:5:1:4:44:11.36%:41:2.7721E-2:46:39:14:25:44 0/0:39:6:3:3:29:20.69%:18:1.1736E-2:44:23:8:15:30 0/0:43:4:2:2:27:14.81%:23:5.5494E-2:45:23:13:10:27 0/1:36:9:3:6:50:18%:28:1.3171E-3:42:41:23:18:52 0/0:48:4:2:2:25:16%:21:5.4928E-2:45:21:10:11:25 0/1:43:8:5:3:22:36.36%:27:1.8042E-3:44:14:8:6:22 0/1:46:8:4:4:53:15.09%:25:2.9389E-3:42:45:20:25:54 0/0:38:1:0:1:20:5%:27:5E-1:44:19:11:8:20 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:60:1:1:0:24:4.17%:34:5E-1:46:23:8:15:24 0/0:34:3:1:2:33:9.09%:37:1.1923E-1:46:30:11:19:33 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:44:34:10:24:37 0/1:42:11:5:6:29:37.93%:38:1.5195E-4:45:18:4:14:30 0/0:38:1:0:1:24:4.17%:34:5E-1:43:23:9:14:24 0/0:36:3:1:2:28:10.71%:28:1.1818E-1:48:25:14:11:29 0/1:37:7:2:5:45:15.56%:22:6.0738E-3:44:38:15:23:46 0/1:44:10:5:5:32:31.25%:33:4.259E-4:50:22:10:12:32 0/0:36:4:2:2:34:11.76%:31:5.6946E-2:43:30:15:15:34 0/1:40:7:0:7:32:21.88%:22:5.4182E-3:45:25:12:13:33 0/0:37:5:2:3:30:16.67%:21:2.6093E-2:40:25:12:13:30 0/1:45:8:3:5:35:22.86%:26:2.4931E-3:41:27:10:17:35 0/1:35:7:4:3:46:15.22%:22:6.1097E-3:41:39:11:28:48 0/0:35:2:1:1:44:4.55%:60:2.4713E-1:44:42:19:23:45 0/1:38:9:7:2:30:30%:30:9.678E-4:43:21:7:14:31 0/1:42:13:5:8:34:38.24%:45:2.9583E-5:47:21:9:12:34 0/0:36:1:0:1:21:4.76%:31:5E-1:43:20:8:12:21 0/0:43:4:2:2:25:16%:21:5.4928E-2:41:21:9:12:26 0/0:41:6:2:4:35:17.14%:25:1.238E-2:47:29:17:12:35 0/0:38:2:0:2:25:8%:31:2.449E-1:47:23:11:12:25 0/1:44:10:4:6:42:23.81%:32:5.3293E-4:41:32:14:18:43 0/1:39:8:3:5:23:34.78%:27:1.8791E-3:41:15:6:9:23 0/0:41:5:2:3:27:18.52%:19:2.5527E-2:46:22:7:15:27 0/0:38:3:0:3:27:11.11%:28:1.1792E-1:46:24:11:13:28 0/0:37:6:0:6:37:16.22%:28:1.2549E-2:41:31:12:19:39 0/0:45:5:0:5:27:18.52%:19:2.5527E-2:45:22:9:13:27 0/0:40:6:4:2:31:19.35%:20:1.1977E-2:41:25:11:14:31 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:18 0/0:36:4:0:4:24:16.67%:18:5.461E-2:48:20:13:7:25 0/0:35:3:1:2:26:11.54%:25:1.1765E-1:41:23:9:14:26 0/0:36:5:2:3:23:21.74%:14:2.4548E-2:40:18:8:10:25 0/0:36:5:2:3:30:16.67%:21:2.6093E-2:39:25:11:14:31 0/0:36:6:2:4:31:19.35%:20:1.1977E-2:45:25:10:15:31 0/0:49:2:1:1:35:5.71%:47:2.4638E-1:42:33:16:17:36 0/0:38:1:1:0:22:4.55%:31:5E-1:42:21:10:11:23 0/0:60:1:1:0:23:4.35%:34:5E-1:41:22:8:14:23 0/0:36:2:0:2:23:8.7%:28:2.4444E-1:41:21:14:7:25 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:21 0/1:37:7:3:4:35:20%:22:5.6095E-3:41:28:7:21:35 0/1:42:8:3:5:37:21.62%:25:2.5617E-3:44:29:11:18:37 0/1:41:8:3:5:37:21.62%:25:2.5617E-3:43:29:10:19:38 0/0:38:2:1:1:34:5.88%:43:2.4627E-1:46:32:12:20:36 0/0:45:3:0:3:30:10%:31:1.1864E-1:43:27:8:19:30 0/0:36:2:0:2:20:10%:21:2.4359E-1:43:18:8:10:21 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:39:15:4:11:19 0/0:40:5:3:2:34:14.71%:27:2.6693E-2:42:29:10:19:35 0/0:37:4:0:4:49:8.16%:56:5.8654E-2:39:45:18:27:49 0/0:37:6:2:4:48:12.5%:41:1.3237E-2:42:42:23:19:49 0/0:36:4:0:4:26:15.38%:20:5.5222E-2:39:22:9:13:28 0/0:36:4:1:3:37:10.81%:38:5.7399E-2:43:33:13:20:37 0/0:38:2:0:2:20:10%:21:2.4359E-1:39:18:6:12:21 0/0:38:6:2:4:40:15%:30:1.2773E-2:40:34:17:17:40 0/0:35:3:0:3:51:5.88%:66:1.2129E-1:40:48:17:31:52 0/0:36:3:2:1:26:11.54%:25:1.1765E-1:41:23:10:13:27 0/0:34:2:0:2:25:8%:31:2.449E-1:44:23:8:15:26 0/0:38:5:1:4:41:12.2%:38:2.7465E-2:38:36:15:21:43 0/0:37:3:1:2:41:7.32%:50:1.2037E-1:40:38:20:18:44 0/0:37:5:0:5:29:17.24%:22:2.5917E-2:41:24:12:12:30 0/0:36:3:2:1:36:8.33%:40:1.1972E-1:40:33:19:14:38 0/0:36:5:0:5:37:13.51%:32:2.706E-2:39:32:14:18:38 0/0:38:4:1:3:35:11.43%:35:5.7106E-2:41:31:13:18:37 0/0:36:3:1:2:37:8.11%:43:1.1986E-1:41:34:13:21:38 0/0:38:3:0:3:26:11.54%:25:1.1765E-1:42:23:14:9:29 0/1:36:7:1:6:44:15.91%:22:6.0363E-3:39:37:15:22:46 0/0:35:3:1:2:32:9.38%:34:1.1905E-1:38:29:9:20:32 0/0:35:4:1:3:33:12.12%:32:5.6777E-2:41:29:11:18:33 0/0:38:2:0:2:29:6.9%:37:2.4561E-1:37:27:8:19:31 0/0:42:5:1:4:36:13.89%:29:2.6944E-2:41:31:17:14:36 0/1:37:7:2:5:53:13.21%:21:6.3251E-3:38:46:18:28:56 0/1:39:11:3:8:50:22%:35:2.6374E-4:44:39:19:20:51 0/0:46:4:1:3:42:9.52%:43:5.801E-2:43:38:15:23:45 0/0:38:4:0:4:31:12.9%:29:5.6405E-2:39:27:13:14:32 0/1:43:8:3:5:32:25%:26:2.3764E-3:42:24:15:9:34 0/0:33:6:1:5:39:15.38%:31:1.2702E-2:42:33:16:17:41 0/0:43:4:1:3:34:11.76%:31:5.6946E-2:43:30:14:16:34 0/0:35:5:3:2:36:13.89%:29:2.6944E-2:41:31:11:20:37 0/0:40:6:3:3:33:18.18%:23:1.219E-2:40:27:11:16:36 0/0:49:2:1:1:21:9.52%:25:2.439E-1:39:19:5:14:22 0/0:37:4:1:3:39:10.26%:41:5.7662E-2:43:35:17:18:39 0/0:38:4:1:3:34:11.76%:31:5.6946E-2:41:30:9:21:36 0/1:38:7:3:4:46:15.22%:22:6.1097E-3:38:39:17:22:47 0/0:37:2:0:2:37:5.41%:50:2.4658E-1:41:35:19:16:39 MTB_anc 2163494 . G C . PASS AC=28;AF=0.093;AN=300;ANN=C|missense_variant|MODERATE|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3818C>G|p.Ala1273Gly|3818/4380|3818/4380|1273/1459||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163494G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163494G>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:7:1:6:34:20.59%:22:5.5492E-3:43:27:15:12:35 0/0:52:3:3:0:16:18.75%:11:1.129E-1:53:13:6:7:17 0/0:35:6:1:5:52:11.54%:47:1.3417E-2:43:46:12:34:53 0/0:37:4:1:3:29:13.79%:26:5.5981E-2:46:25:11:14:29 0/0:49:2:1:1:33:6.06%:44:2.4615E-1:45:31:19:12:33 0/0:49:2:1:1:17:11.76%:18:2.4242E-1:41:15:7:8:17 0/0:42:3:1:2:26:11.54%:25:1.1765E-1:44:23:10:13:26 0/0:38:4:0:4:31:12.9%:29:5.6405E-2:45:27:13:14:31 0/0:38:3:1:2:48:6.25%:59:1.2105E-1:46:45:18:27:51 0/0:45:3:0:3:30:10%:31:1.1864E-1:50:27:13:14:31 0/0:37:2:0:2:48:4.17%:67:2.4737E-1:46:46:18:28:48 0/1:37:8:2:6:35:22.86%:26:2.4931E-3:44:27:15:12:35 0/0:38:4:1:3:32:12.5%:29:5.6596E-2:47:28:17:11:33 0/0:35:6:1:5:38:15.79%:28:1.2628E-2:40:32:12:20:41 0/0:44:3:0:3:22:13.64%:19:1.1628E-1:43:19:8:11:22 0/0:49:6:1:5:37:16.22%:28:1.2549E-2:43:31:20:11:37 0/0:35:5:1:4:21:23.81%:12:2.3921E-2:42:16:4:12:21 0/0:34:2:1:1:15:13.33%:16:2.4138E-1:40:13:1:12:16 0/0:38:1:1:0:22:4.55%:31:5E-1:42:21:8:13:22 0/0:60:2:0:2:24:8.33%:27:2.4468E-1:44:22:9:13:26 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:46:15:6:9:17 0/0:40:5:3:2:43:11.63%:41:2.764E-2:42:38:19:19:45 0/0:38:2:1:1:25:8%:31:2.449E-1:44:23:10:13:26 0/0:38:4:2:2:42:9.52%:44:5.79E-2:46:37:20:17:43 0/0:49:4:1:3:31:12.9%:29:5.6405E-2:42:27:8:19:31 0/0:42:5:1:4:34:14.71%:27:2.6693E-2:44:29:13:16:35 0/0:38:1:0:1:28:3.57%:41:5E-1:45:27:9:18:29 0/0:38:3:2:1:24:12.5%:22:1.1702E-1:44:21:9:12:26 0/0:49:2:1:1:22:9.09%:24:2.4419E-1:44:20:10:10:22 0/1:36:8:3:5:28:28.57%:26:2.188E-3:42:20:6:14:29 0/0:37:4:2:2:31:12.9%:29:5.6405E-2:45:27:10:17:31 0/0:37:4:0:4:26:15.38%:20:5.5222E-2:47:22:7:15:26 0/0:38:3:2:1:34:8.82%:37:1.194E-1:46:31:16:15:34 0/0:45:3:2:1:25:12%:25:1.1735E-1:43:22:11:11:25 0/0:45:6:3:3:40:15%:30:1.2773E-2:46:34:13:21:41 0/0:40:6:3:3:30:20%:18:1.186E-2:46:24:10:14:30 0/0:37:4:3:1:31:12.9%:29:5.6405E-2:43:27:12:15:32 0/1:42:12:8:4:64:18.75%:38:1.3842E-4:46:52:26:26:64 0/0:40:6:5:1:43:13.95%:36:1.2967E-2:45:37:14:23:46 0/0:38:1:0:1:27:3.7%:41:5E-1:43:26:9:17:27 0/0:38:6:1:5:29:20.69%:18:1.1736E-2:45:23:12:11:29 0/1:40:9:3:6:47:19.57%:28:1.2682E-3:39:37:15:22:48 0/0:45:3:1:2:33:9.09%:37:1.1923E-1:45:30:13:17:35 0/0:38:4:2:2:20:20%:13:5.3015E-2:44:16:5:11:20 0/0:36:3:2:1:37:8.11%:43:1.1986E-1:42:34:11:23:37 0/1:41:7:1:6:34:20.59%:22:5.5492E-3:44:27:16:11:34 0/0:49:2:1:1:24:8.33%:27:2.4468E-1:48:22:9:13:25 0/0:45:6:2:4:40:15%:30:1.2773E-2:40:34:11:23:42 0/1:41:11:6:5:38:28.95%:36:2.1011E-4:46:27:11:16:38 0/0:37:6:0:6:42:14.63%:33:1.2841E-2:44:35:13:22:43 0/0:51:3:0:3:20:15%:16:1.1538E-1:47:17:6:11:20 0/0:41:5:3:2:28:17.86%:19:2.5729E-2:43:23:10:13:28 0/0:38:1:0:1:21:4.76%:31:5E-1:47:20:7:13:21 0/0:38:2:0:2:27:7.41%:34:2.4528E-1:45:25:11:14:27 0/0:34:3:0:3:28:10.71%:28:1.1818E-1:42:25:10:15:29 0/1:41:7:3:4:44:15.91%:22:6.0363E-3:39:37:12:25:44 0/0:43:4:1:3:39:10.26%:41:5.7662E-2:41:35:8:27:39 0/0:30:1:0:1:21:4.76%:31:5E-1:43:20:10:10:23 0/0:38:3:2:1:33:9.09%:37:1.1923E-1:43:30:15:15:33 0/0:42:5:1:4:44:11.36%:41:2.7721E-2:45:39:14:25:44 0/0:41:6:3:3:30:20%:18:1.186E-2:43:24:8:16:30 0/0:43:4:2:2:27:14.81%:23:5.5494E-2:44:23:13:10:27 0/1:37:9:3:6:47:19.15%:28:1.2811E-3:42:38:21:17:52 0/0:48:4:2:2:25:16%:21:5.4928E-2:45:21:10:11:25 0/1:43:8:5:3:22:36.36%:27:1.8042E-3:43:14:8:6:22 0/1:46:8:4:4:53:15.09%:25:2.9389E-3:41:45:21:24:54 0/0:38:1:0:1:19:5.26%:28:5E-1:43:18:10:8:20 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:38 0/0:60:1:1:0:24:4.17%:34:5E-1:45:23:8:15:24 0/0:35:3:1:2:32:9.38%:34:1.1905E-1:46:29:10:19:33 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:44:34:10:24:37 0/1:41:12:6:6:29:41.38%:42:5.8193E-5:45:17:4:13:30 0/0:28:2:1:1:23:8.7%:28:2.4444E-1:44:21:8:13:24 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:46:26:14:12:29 0/1:37:7:2:5:45:15.56%:22:6.0363E-3:43:37:14:23:45 0/1:46:8:4:4:30:26.67%:26:2.2875E-3:49:22:10:12:30 0/0:38:3:1:2:30:10%:31:1.1864E-1:43:27:12:15:33 0/0:40:6:0:6:31:19.35%:20:1.1977E-2:45:25:11:14:31 0/0:37:4:1:3:28:14.29%:23:5.5746E-2:40:24:11:13:30 0/1:47:7:3:4:34:20.59%:22:5.5492E-3:40:27:10:17:34 0/1:36:7:4:3:47:14.89%:22:6.1442E-3:41:40:11:29:47 0/0:37:2:1:1:44:4.55%:60:2.4713E-1:43:42:18:24:44 0/1:39:9:7:2:29:31.03%:30:9.4048E-4:42:20:6:14:31 0/1:42:13:5:8:34:38.24%:45:2.9583E-5:46:21:9:12:34 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 0/0:43:4:2:2:25:16%:21:5.4928E-2:40:21:8:13:26 0/0:40:6:2:4:34:17.65%:23:1.2287E-2:47:28:16:12:35 0/0:37:2:0:2:25:8%:31:2.449E-1:45:23:11:12:25 0/1:45:9:4:5:41:21.95%:29:1.1955E-3:41:32:14:18:42 0/1:39:8:3:5:23:34.78%:27:1.8791E-3:41:15:6:9:23 0/0:41:5:2:3:27:18.52%:19:2.5527E-2:46:22:7:15:27 0/0:38:3:0:3:28:10.71%:28:1.1818E-1:46:25:12:13:28 0/0:35:6:0:6:37:16.22%:28:1.2549E-2:41:31:12:19:39 0/0:45:5:0:5:26:19.23%:17:2.531E-2:45:21:9:12:27 0/0:42:5:3:2:30:16.67%:21:2.6093E-2:41:25:11:14:30 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:18 0/0:38:3:0:3:22:13.64%:19:1.1628E-1:46:19:12:7:24 0/0:38:2:0:2:25:8%:31:2.449E-1:41:23:9:14:25 0/0:36:3:1:2:21:14.29%:19:1.1585E-1:40:18:8:10:24 0/0:37:5:2:3:30:16.67%:21:2.6093E-2:38:25:12:13:30 0/0:35:6:2:4:31:19.35%:20:1.1977E-2:45:25:10:15:31 0/0:49:2:1:1:34:5.88%:43:2.4627E-1:42:32:16:16:37 0/0:39:1:1:0:21:4.76%:31:5E-1:41:20:9:11:22 0/0:60:1:1:0:22:4.55%:31:5E-1:41:21:7:14:23 0/0:36:2:0:2:23:8.7%:28:2.4444E-1:40:21:14:7:25 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:21 0/1:37:7:3:4:34:20.59%:22:5.5492E-3:40:27:7:20:35 0/1:42:8:3:5:37:21.62%:25:2.5617E-3:43:29:11:18:37 0/1:42:7:3:4:35:20%:22:5.6095E-3:42:28:10:18:36 0/0:37:3:2:1:36:8.33%:40:1.1972E-1:43:33:12:21:36 0/0:45:3:0:3:28:10.71%:28:1.1792E-1:41:24:6:18:29 0/0:38:1:0:1:20:5%:27:5E-1:42:19:9:10:20 0/0:38:2:1:1:15:13.33%:16:2.4138E-1:39:13:4:9:19 0/0:41:5:3:2:34:14.71%:27:2.6693E-2:42:29:10:19:35 0/0:37:4:0:4:46:8.7%:49:5.8402E-2:39:42:16:26:49 0/1:33:7:4:3:48:14.58%:22:6.1774E-3:42:41:22:19:48 0/0:36:4:0:4:27:14.81%:23:5.5494E-2:38:23:9:14:28 0/0:37:3:1:2:36:8.33%:40:1.1972E-1:43:33:13:20:36 0/0:38:2:0:2:19:10.53%:21:2.4324E-1:38:17:4:13:21 0/0:39:6:2:4:39:15.38%:31:1.2702E-2:40:33:17:16:40 0/0:36:3:1:2:51:5.88%:66:1.2129E-1:39:48:17:31:51 0/0:36:3:2:1:28:10.71%:28:1.1818E-1:40:25:11:14:29 0/0:36:2:0:2:26:7.69%:30:2.451E-1:43:24:9:15:26 0/0:37:5:1:4:41:12.2%:38:2.7465E-2:38:36:15:21:43 0/0:34:3:1:2:39:7.69%:47:1.2013E-1:40:36:19:17:44 0/0:35:5:0:5:29:17.24%:22:2.5917E-2:40:24:13:11:30 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:39:30:17:13:37 0/0:35:4:0:4:36:11.11%:34:5.7257E-2:38:32:13:19:38 0/0:38:4:1:3:37:10.81%:38:5.7399E-2:39:33:14:19:37 0/0:36:3:1:2:34:8.82%:37:1.194E-1:42:31:11:20:38 0/0:38:3:0:3:25:12%:25:1.1735E-1:40:22:13:9:29 0/1:36:7:1:6:41:17.07%:22:5.9136E-3:38:34:15:19:46 0/0:36:2:1:1:31:6.45%:40:2.459E-1:37:29:9:20:31 0/0:35:2:0:2:30:6.67%:37:2.4576E-1:40:28:10:18:31 0/0:36:3:1:2:31:9.68%:34:1.1885E-1:35:28:9:19:31 0/0:43:4:1:3:35:11.43%:35:5.7106E-2:40:31:17:14:35 0/0:39:6:2:4:52:11.54%:47:1.3417E-2:38:46:18:28:54 0/1:39:11:4:7:50:22%:35:2.6374E-4:45:39:19:20:50 0/0:51:3:1:2:42:7.14%:49:1.2048E-1:42:39:16:23:44 0/0:38:4:0:4:30:13.33%:26:5.62E-2:39:26:12:14:32 0/1:40:9:4:5:32:28.12%:29:1.0185E-3:42:23:15:8:34 0/0:38:3:0:3:36:8.33%:40:1.1972E-1:42:33:16:17:37 0/0:43:4:1:3:33:12.12%:32:5.6777E-2:41:29:14:15:34 0/0:36:5:3:2:34:14.71%:27:2.6693E-2:42:29:9:20:36 0/0:38:6:4:2:33:18.18%:23:1.219E-2:39:27:10:17:36 0/0:49:2:1:1:21:9.52%:25:2.439E-1:38:19:5:14:22 0/0:37:4:1:3:38:10.53%:37:5.7534E-2:43:34:16:18:39 0/0:37:4:1:3:34:11.76%:31:5.6946E-2:40:30:9:21:36 0/1:38:7:3:4:44:15.91%:22:6.0363E-3:38:37:16:21:47 0/0:34:2:0:2:38:5.26%:50:2.4667E-1:40:36:19:17:39 MTB_anc 2163496 . A C . PASS AC=24;AF=0.080;AN=300;ANN=C|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3816T>G|p.Gly1272Gly|3816/4380|3816/4380|1272/1459||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163496A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163496A>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:7:1:6:34:20.59%:22:5.5492E-3:44:27:15:12:35 0/0:52:3:3:0:16:18.75%:11:1.129E-1:52:13:6:7:17 0/0:38:5:0:5:53:9.43%:56:2.8317E-2:44:48:13:35:55 0/0:36:4:1:3:28:14.29%:23:5.5746E-2:47:24:11:13:29 0/0:49:2:1:1:33:6.06%:44:2.4615E-1:47:31:19:12:33 0/0:49:2:1:1:17:11.76%:18:2.4242E-1:41:15:7:8:17 0/0:45:3:1:2:26:11.54%:25:1.1765E-1:44:23:10:13:26 0/0:38:4:0:4:31:12.9%:29:5.6405E-2:44:27:13:14:32 0/0:38:3:1:2:48:6.25%:59:1.2105E-1:46:45:18:27:51 0/0:45:3:0:3:31:9.68%:34:1.1885E-1:49:28:14:14:31 0/0:36:2:0:2:49:4.08%:71:2.4742E-1:46:47:19:28:49 0/1:38:8:2:6:34:23.53%:26:2.4562E-3:44:26:14:12:35 0/0:37:3:0:3:32:9.38%:34:1.1905E-1:47:29:17:12:33 0/0:36:6:1:5:41:14.63%:33:1.2841E-2:40:35:13:22:41 0/0:41:3:0:3:23:13.04%:22:1.1667E-1:43:20:8:12:23 0/0:49:6:1:5:35:17.14%:25:1.238E-2:43:29:18:11:35 0/0:35:5:1:4:21:23.81%:12:2.3921E-2:42:16:4:12:21 0/0:36:2:1:1:16:12.5%:15:2.4194E-1:39:14:2:12:16 0/0:38:1:1:0:22:4.55%:31:5E-1:42:21:8:13:22 0/0:60:2:0:2:24:8.33%:27:2.4468E-1:46:22:10:12:26 0/0:37:2:1:1:18:11.11%:18:2.4286E-1:46:16:6:10:18 0/0:42:5:3:2:43:11.63%:41:2.764E-2:44:38:20:18:46 0/0:45:3:2:1:26:11.54%:25:1.1765E-1:44:23:10:13:26 0/0:38:4:2:2:43:9.3%:47:5.8115E-2:45:39:21:18:44 0/0:49:4:1:3:31:12.9%:29:5.6405E-2:41:27:8:19:31 0/0:42:5:1:4:34:14.71%:27:2.6693E-2:43:29:13:16:35 0/0:38:1:0:1:28:3.57%:41:5E-1:46:27:10:17:29 0/0:37:3:2:1:24:12.5%:22:1.1702E-1:44:21:9:12:26 0/0:38:1:0:1:22:4.55%:31:5E-1:45:21:10:11:22 0/1:36:7:2:5:28:25%:22:5.1054E-3:41:21:7:14:29 0/0:37:4:2:2:31:12.9%:29:5.6405E-2:45:27:10:17:31 0/0:37:4:0:4:26:15.38%:20:5.5222E-2:46:22:7:15:26 0/0:36:3:2:1:35:8.57%:40:1.1957E-1:46:32:16:16:35 0/0:43:3:2:1:24:12.5%:22:1.1667E-1:44:20:10:10:25 0/0:45:6:3:3:42:14.29%:33:1.2905E-2:46:36:14:22:42 0/0:41:6:3:3:29:20.69%:18:1.1736E-2:47:23:10:13:30 0/0:35:5:4:1:32:15.62%:24:2.6412E-2:43:27:12:15:32 0/1:41:12:8:4:64:18.75%:38:1.3842E-4:46:52:26:26:64 0/0:39:6:5:1:45:13.33%:39:1.3082E-2:44:39:14:25:47 0/0:38:1:0:1:26:3.85%:38:5E-1:44:25:8:17:27 0/0:38:6:1:5:29:20.69%:18:1.1736E-2:45:23:12:11:29 0/1:40:9:3:6:47:19.57%:28:1.2682E-3:40:37:15:22:48 0/0:42:4:2:2:34:11.76%:31:5.6946E-2:45:30:13:17:35 0/0:37:4:2:2:21:19.05%:15:5.3471E-2:44:17:5:12:22 0/0:35:3:2:1:35:8.57%:40:1.1957E-1:43:32:11:21:37 0/1:41:7:1:6:34:20.59%:22:5.5492E-3:45:27:17:10:35 0/0:49:2:1:1:24:8%:27:2.4468E-1:49:22:8:14:25 0/0:45:6:2:4:40:15%:30:1.2773E-2:41:34:11:23:42 0/1:40:11:6:5:39:28.21%:36:2.1547E-4:45:28:12:16:39 0/0:38:5:0:5:42:12.2%:38:2.7465E-2:45:36:13:23:43 0/0:47:2:0:2:20:10%:21:2.4359E-1:49:18:6:12:20 0/0:39:5:3:2:28:17.86%:19:2.5729E-2:43:23:10:13:28 0/0:38:1:0:1:21:4.76%:31:5E-1:46:20:7:13:21 0/0:38:2:0:2:26:7.69%:30:2.451E-1:45:24:10:14:27 0/0:34:3:0:3:26:11.54%:25:1.1765E-1:43:23:10:13:29 0/1:42:7:3:4:44:15.91%:22:6.0363E-3:38:37:12:25:44 0/0:42:4:1:3:38:10.53%:37:5.7534E-2:41:34:8:26:39 0/0:38:1:0:1:22:4.55%:31:5E-1:46:21:12:9:24 0/0:38:3:2:1:33:9.09%:37:1.1923E-1:44:30:15:15:33 0/0:41:5:1:4:43:11.63%:41:2.764E-2:45:38:14:24:44 0/0:37:6:3:3:29:20.69%:18:1.1736E-2:43:23:8:15:29 0/0:43:4:2:2:27:14.81%:23:5.5494E-2:45:23:13:10:27 0/1:36:10:3:7:51:19.61%:32:5.9987E-4:42:41:23:18:52 0/0:48:4:2:2:25:16%:21:5.4928E-2:45:21:10:11:25 0/1:42:8:5:3:21:38.1%:27:1.7241E-3:44:13:8:5:22 0/1:45:8:4:4:54:14.81%:25:2.9557E-3:41:46:21:25:54 0/0:38:1:0:1:20:5%:27:5E-1:42:19:11:8:20 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:39 0/0:60:1:1:0:24:4.17%:34:5E-1:45:23:8:15:24 0/0:34:2:1:1:31:6.45%:40:2.459E-1:45:29:10:19:32 0/0:42:3:2:1:34:8.82%:37:1.194E-1:45:31:9:22:37 0/1:41:11:5:6:30:36.67%:37:1.594E-4:44:19:4:15:32 0/0:38:1:0:1:21:4.76%:31:5E-1:46:20:8:12:24 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:46:26:14:12:29 0/1:37:7:2:5:45:15.56%:22:6.0738E-3:44:38:14:24:45 0/1:46:8:4:4:31:25.81%:26:2.3332E-3:49:23:10:13:31 0/0:35:3:1:2:34:8.82%:37:1.194E-1:42:31:16:15:34 0/0:41:6:0:6:31:19.35%:20:1.1977E-2:46:25:11:14:31 0/0:36:4:1:3:25:16%:21:5.4928E-2:41:21:10:11:28 0/1:47:7:3:4:32:21.88%:22:5.4182E-3:40:25:9:16:34 0/0:36:6:3:3:46:13.04%:39:1.3136E-2:41:40:11:29:48 0/0:36:1:0:1:42:2.38%:66:5E-1:43:41:18:23:44 0/1:39:9:7:2:31:29.03%:30:9.9376E-4:43:22:7:15:32 0/1:41:13:5:8:34:38.24%:45:2.9583E-5:47:21:9:12:34 0/0:36:1:0:1:21:4.76%:31:5E-1:42:20:8:12:21 0/0:42:4:2:2:25:16%:21:5.4928E-2:40:21:8:13:25 0/0:40:6:2:4:36:16.67%:25:1.2467E-2:48:30:17:13:36 0/0:36:2:0:2:26:7.69%:30:2.451E-1:46:24:12:12:26 0/1:45:9:4:5:42:21.43%:29:1.2112E-3:41:33:14:19:43 0/1:37:8:3:5:22:36.36%:27:1.8042E-3:41:14:5:9:23 0/0:41:5:2:3:27:18.52%:19:2.5527E-2:45:22:7:15:27 0/0:38:3:0:3:27:11.11%:28:1.1792E-1:47:24:12:12:28 0/0:36:6:0:6:38:15.79%:28:1.2628E-2:40:32:13:19:39 0/0:47:4:0:4:26:15.38%:20:5.5222E-2:44:22:9:13:27 0/0:42:5:3:2:30:16.67%:21:2.6093E-2:42:25:11:14:30 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:38:3:0:3:23:13.04%:22:1.1667E-1:45:20:13:7:24 0/0:38:2:0:2:25:8%:31:2.449E-1:42:23:9:14:25 0/0:35:4:1:3:23:17.39%:18:5.4264E-2:39:19:9:10:25 0/0:37:5:2:3:29:17.24%:22:2.5917E-2:39:24:12:12:30 0/0:36:6:2:4:30:20%:18:1.186E-2:44:24:9:15:30 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:42:34:18:16:37 0/0:27:1:1:0:21:4.76%:31:5E-1:42:20:8:12:22 0/0:52:1:1:0:22:4.55%:31:5E-1:41:21:8:13:23 0/0:35:2:0:2:24:8.33%:27:2.4468E-1:39:22:14:8:25 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:21 0/1:37:7:3:4:35:20%:22:5.6095E-3:40:28:7:21:35 0/1:42:8:3:5:38:21.05%:25:2.5935E-3:43:30:11:19:38 0/0:45:6:2:4:35:17.14%:25:1.238E-2:43:29:11:18:36 0/0:38:2:1:1:33:6.06%:44:2.4615E-1:45:31:12:19:36 0/0:45:3:0:3:29:10.34%:31:1.1842E-1:41:26:7:19:29 0/0:38:1:0:1:20:5%:27:5E-1:41:19:9:10:21 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:40:15:6:9:19 0/0:43:4:2:2:34:11.76%:31:5.6946E-2:41:30:11:19:36 0/0:37:4:0:4:46:8.7%:49:5.8402E-2:39:42:17:25:49 0/0:36:4:2:2:46:8.7%:49:5.8402E-2:41:42:23:19:49 0/0:36:4:0:4:26:15.38%:20:5.5222E-2:38:22:10:12:28 0/0:38:3:1:2:36:8.33%:40:1.1972E-1:42:33:13:20:37 0/0:38:2:0:2:22:9.09%:24:2.4419E-1:39:20:7:13:22 0/0:41:6:2:4:40:15%:30:1.2773E-2:39:34:17:17:40 0/0:38:2:0:2:50:4%:70:2.4747E-1:39:48:17:31:51 0/0:36:3:2:1:29:10.34%:31:1.1842E-1:39:26:12:14:30 0/0:35:2:0:2:25:8%:31:2.449E-1:41:23:8:15:26 0/0:38:5:1:4:43:11.63%:41:2.764E-2:37:38:17:21:44 0/0:35:3:1:2:41:7.32%:50:1.2037E-1:39:38:19:19:45 0/0:37:5:0:5:28:17.86%:19:2.5729E-2:40:23:12:11:30 0/0:38:2:1:1:35:5.71%:47:2.4638E-1:39:33:19:14:37 0/0:36:4:0:4:37:10.81%:38:5.7399E-2:38:33:14:19:38 0/0:38:4:1:3:37:10.81%:38:5.7399E-2:40:33:14:19:38 0/0:37:3:1:2:37:8.11%:43:1.1986E-1:42:34:13:21:37 0/0:32:3:0:3:29:10.34%:31:1.1842E-1:39:26:17:9:29 0/0:38:6:0:6:41:14.63%:33:1.2841E-2:39:35:15:20:46 0/0:37:2:1:1:31:6.45%:40:2.459E-1:36:29:9:20:33 0/0:36:2:0:2:31:6.45%:40:2.459E-1:41:29:10:19:32 0/0:38:2:0:2:28:7.14%:34:2.4545E-1:35:26:9:17:31 0/0:43:4:1:3:35:11.43%:35:5.7106E-2:40:31:17:14:36 0/0:41:4:0:4:50:8%:55:5.8732E-2:38:46:19:27:55 0/1:40:10:4:6:50:20%:32:5.9342E-4:45:40:19:21:51 0/0:43:3:1:2:40:7.5%:46:1.2025E-1:43:37:16:21:42 0/0:37:5:0:5:31:16.13%:24:2.6257E-2:38:26:11:15:33 0/1:42:8:3:5:32:25%:26:2.3764E-3:43:24:15:9:34 0/0:38:3:0:3:35:8.57%:40:1.1957E-1:42:32:16:16:36 0/0:43:4:1:3:33:12.12%:32:5.6777E-2:43:29:14:15:34 0/0:36:5:3:2:35:14.29%:30:2.6822E-2:42:30:10:20:35 0/0:36:6:3:3:32:18.75%:20:1.2087E-2:41:26:11:15:35 0/0:49:2:1:1:21:9.52%:25:2.439E-1:38:19:5:14:22 0/0:37:4:1:3:39:10.26%:41:5.7662E-2:42:35:17:18:39 0/0:37:4:1:3:36:11.11%:34:5.7257E-2:41:32:10:22:38 0/1:38:7:3:4:47:14.89%:22:6.1442E-3:37:40:17:23:49 0/0:37:2:0:2:37:5.41%:50:2.4658E-1:41:35:19:16:39 MTB_anc 2163504 . G A . PASS AC=21;AF=0.070;AN=300;ANN=A|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3808C>T|p.Leu1270Leu|3808/4380|3808/4380|1270/1459||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163504G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163504G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:6:1:5:33:18.18%:23:1.219E-2:45:27:14:13:34 0/0:53:3:3:0:17:17.65%:14:1.1364E-1:52:14:7:7:17 0/0:37:5:0:5:55:9.09%:59:2.8423E-2:44:50:14:36:57 0/0:39:4:1:3:29:13.79%:26:5.5981E-2:47:25:9:16:29 0/0:49:2:1:1:34:5.88%:43:2.4627E-1:46:32:20:12:35 0/0:39:2:1:1:18:11.11%:18:2.4286E-1:42:16:7:9:18 0/0:45:3:1:2:26:11.54%:25:1.1765E-1:49:23:10:13:26 0/0:38:4:0:4:32:12.5%:29:5.6596E-2:44:28:14:14:32 0/0:38:3:1:2:54:5.56%:69:1.215E-1:46:51:21:30:54 0/0:46:3:0:3:30:10%:31:1.1864E-1:49:27:13:14:30 0/0:38:2:0:2:50:4%:70:2.4747E-1:46:48:19:29:50 0/1:38:8:2:6:36:22.22%:25:2.5282E-3:44:28:16:12:36 0/0:36:2:0:2:32:6.25%:40:2.4603E-1:47:30:18:12:33 0/0:38:4:1:3:40:10%:40:5.7784E-2:40:36:14:22:42 0/0:45:3:0:3:22:13.64%:19:1.1628E-1:41:19:8:11:23 0/0:46:5:1:4:34:14.71%:27:2.6693E-2:44:29:17:12:34 0/0:38:4:1:3:19:21.05%:13:5.251E-2:43:15:4:11:19 0/0:37:2:1:1:16:12.5%:15:2.4194E-1:41:14:2:12:16 0/0:39:1:1:0:22:4.55%:31:5E-1:43:21:8:13:22 0/0:60:2:0:2:24:8.33%:27:2.4468E-1:44:22:8:14:27 0/0:36:2:1:1:18:11.11%:18:2.4286E-1:45:16:6:10:18 0/0:43:5:3:2:47:10.64%:47:2.7945E-2:43:42:20:22:49 0/0:46:3:2:1:25:12%:25:1.1735E-1:46:22:9:13:26 0/0:38:4:2:2:44:9.09%:46:5.8215E-2:45:40:21:19:45 0/0:49:4:1:3:29:13.79%:26:5.5981E-2:43:25:8:17:30 0/0:41:5:1:4:34:14.71%:27:2.6693E-2:44:29:13:16:35 0/0:34:1:0:1:27:3.7%:41:5E-1:47:26:8:18:28 0/0:37:4:3:1:26:15.38%:20:5.5222E-2:46:22:9:13:27 0/0:38:1:0:1:22:4.55%:31:5E-1:46:21:10:11:22 0/1:37:7:3:4:29:24.14%:22:5.1909E-3:43:22:7:15:30 0/0:37:4:2:2:33:12.12%:32:5.6777E-2:44:29:12:17:34 0/0:38:3:0:3:25:12%:25:1.1735E-1:45:22:6:16:26 0/0:38:3:2:1:35:8.57%:40:1.1957E-1:46:32:16:16:35 0/0:37:3:2:1:24:12.5%:22:1.1702E-1:43:21:10:11:25 0/0:46:6:3:3:41:14.63%:33:1.2841E-2:47:35:14:21:41 0/0:41:6:3:3:29:20.69%:16:1.1603E-2:48:22:8:14:29 0/0:38:3:2:1:31:9.68%:34:1.1885E-1:42:28:12:16:33 0/1:40:12:8:4:66:18.18%:38:1.4106E-4:46:54:27:27:66 0/0:42:5:4:1:46:10.87%:44:2.7874E-2:44:41:14:27:47 0/0:37:1:0:1:27:3.7%:41:5E-1:45:26:9:17:27 0/0:37:6:1:5:29:20.69%:18:1.1736E-2:46:23:12:11:29 0/1:38:9:3:6:47:19.57%:28:1.2682E-3:41:37:15:22:48 0/0:37:3:2:1:32:9.38%:34:1.1905E-1:44:29:11:18:33 0/0:38:4:2:2:23:17.39%:18:5.4264E-2:40:19:7:12:23 0/0:38:2:2:0:35:5.71%:47:2.4638E-1:43:33:11:22:36 0/1:41:7:1:6:34:20.59%:22:5.5492E-3:44:27:16:11:34 0/0:38:2:2:0:22:9.09%:24:2.4419E-1:50:20:8:12:22 0/0:46:6:2:4:42:14.29%:33:1.2905E-2:41:36:14:22:44 0/1:40:10:5:5:37:27.03%:33:4.8486E-4:47:27:12:15:37 0/0:38:5:0:5:44:11.63%:41:2.764E-2:45:38:14:24:45 0/0:60:2:0:2:18:11.11%:18:2.4286E-1:48:16:5:11:18 0/0:43:4:2:2:28:14.29%:23:5.5746E-2:42:24:11:13:30 0/0:39:1:0:1:21:4.76%:31:5E-1:48:20:7:13:21 0/0:38:2:0:2:27:7.41%:34:2.4528E-1:48:25:11:14:27 0/0:38:2:0:2:25:8%:31:2.449E-1:45:23:10:13:28 0/0:41:6:2:4:45:13.33%:39:1.3082E-2:39:39:14:25:45 0/0:38:4:1:3:38:10.53%:37:5.7534E-2:41:34:9:25:40 0/0:37:1:0:1:24:4.17%:34:5E-1:43:23:12:11:25 0/0:38:3:2:1:33:9.09%:37:1.1923E-1:43:30:15:15:33 0/0:43:5:1:4:45:11.11%:41:2.764E-2:45:38:15:23:45 0/0:38:6:3:3:31:19.35%:20:1.1977E-2:44:25:10:15:31 0/0:43:4:2:2:28:14.29%:23:5.5746E-2:44:24:14:10:28 0/1:38:8:2:6:47:17.02%:25:2.8249E-3:44:39:24:15:51 0/0:53:3:2:1:25:12%:25:1.1735E-1:44:22:11:11:25 0/1:41:8:5:3:22:36.36%:27:1.8042E-3:45:14:8:6:22 0/1:44:8:4:4:55:14.55%:25:2.9718E-3:41:47:22:25:55 0/0:39:1:0:1:20:5%:27:5E-1:44:19:11:8:20 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:60:1:1:0:23:4.35%:34:5E-1:44:22:7:15:23 0/0:36:2:1:1:30:6.67%:37:2.4576E-1:46:28:9:19:32 0/0:49:2:1:1:38:5.26%:50:2.4667E-1:45:36:12:24:39 0/1:42:11:5:6:30:36.67%:37:1.594E-4:48:19:6:13:33 0/0:39:1:0:1:23:4.35%:31:5E-1:47:21:8:13:24 0/0:39:2:1:1:30:6.67%:37:2.4576E-1:48:28:16:12:31 0/0:38:6:2:4:44:13.64%:36:1.3026E-2:43:38:14:24:44 0/1:43:8:4:4:31:25.81%:26:2.3332E-3:50:23:11:12:31 0/0:37:3:1:2:33:9.09%:37:1.1923E-1:42:30:16:14:34 0/0:41:6:0:6:31:19.35%:20:1.1977E-2:45:25:12:13:31 0/0:39:4:1:3:28:14.29%:23:5.5746E-2:42:24:12:12:28 0/1:44:7:3:4:34:20.59%:22:5.5492E-3:43:27:10:17:34 0/0:37:6:4:2:46:13.04%:39:1.3136E-2:42:40:11:29:46 0/0:38:2:1:1:44:4.55%:60:2.4713E-1:43:42:18:24:45 0/1:38:9:7:2:30:30%:30:9.678E-4:43:21:7:14:30 0/1:41:12:4:8:33:36.36%:41:7.2075E-5:47:21:9:12:33 0/0:37:1:0:1:21:4.76%:31:5E-1:43:20:9:11:22 0/0:43:4:2:2:25:16%:21:5.4928E-2:40:21:8:13:25 0/0:40:6:2:4:37:16.22%:28:1.2549E-2:48:31:17:14:37 0/0:38:2:0:2:26:7.69%:30:2.451E-1:48:24:12:12:26 0/1:43:9:4:5:42:21.43%:29:1.2112E-3:43:33:15:18:43 0/1:38:8:3:5:23:34.78%:27:1.8791E-3:43:15:6:9:23 0/0:42:4:1:3:27:14.81%:23:5.5494E-2:45:23:7:16:27 0/0:38:3:0:3:27:11.11%:28:1.1792E-1:47:24:11:13:27 0/0:38:6:0:6:40:15%:30:1.2773E-2:41:34:15:19:40 0/0:47:5:0:5:28:17.86%:19:2.5729E-2:45:23:9:14:29 0/0:42:5:3:2:31:16.13%:24:2.6257E-2:42:26:11:15:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:38:4:1:3:21:19.05%:15:5.3471E-2:48:17:11:6:23 0/0:38:2:0:2:26:7.69%:30:2.451E-1:42:24:9:15:26 0/0:37:4:1:3:24:16.67%:18:5.461E-2:40:20:10:10:26 0/0:38:5:2:3:32:15.62%:24:2.6412E-2:39:27:12:15:33 0/0:38:5:2:3:29:17.24%:22:2.5917E-2:46:24:9:15:29 0/0:49:2:1:1:38:5.26%:50:2.4667E-1:43:36:18:18:39 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 0/0:60:1:1:0:23:4.35%:34:5E-1:42:22:8:14:23 0/0:39:1:0:1:23:4.35%:34:5E-1:43:22:15:7:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/1:38:7:3:4:36:19.44%:22:5.6667E-3:42:29:6:23:37 0/1:43:7:3:4:38:18.42%:22:5.7727E-3:44:31:12:19:38 0/0:44:6:2:4:36:16.67%:25:1.2467E-2:43:30:11:19:37 0/0:39:2:1:1:33:6.06%:44:2.4615E-1:45:31:12:19:34 0/0:45:3:0:3:29:10.34%:31:1.1842E-1:43:26:7:19:30 0/0:39:1:0:1:20:5%:27:5E-1:42:19:9:10:21 0/0:38:2:1:1:16:12.5%:15:2.4194E-1:40:14:4:10:18 0/0:35:4:2:2:36:11.11%:34:5.7257E-2:44:32:13:19:37 0/0:37:4:0:4:47:8.51%:53:5.849E-2:40:43:18:25:49 0/0:37:5:2:3:49:10.2%:50:2.8079E-2:43:44:24:20:51 0/0:38:3:0:3:29:10.34%:31:1.1842E-1:39:26:11:15:29 0/0:38:3:1:2:37:8.11%:43:1.1986E-1:42:34:13:21:38 0/0:39:2:0:2:22:9.09%:24:2.4419E-1:40:20:7:13:22 0/0:41:6:2:4:41:14.63%:33:1.2841E-2:40:35:17:18:41 0/0:38:2:0:2:50:4%:70:2.4747E-1:39:48:18:30:51 0/0:38:2:2:0:28:7.14%:34:2.4545E-1:41:26:12:14:29 0/0:39:1:0:1:28:3.57%:41:5E-1:44:27:11:16:29 0/0:37:5:1:4:41:12.2%:38:2.7465E-2:39:36:17:19:42 0/0:38:3:1:2:42:7.14%:49:1.2048E-1:39:39:19:20:46 0/0:36:4:0:4:31:12.9%:29:5.6405E-2:40:27:15:12:32 0/0:36:3:2:1:38:7.89%:43:1.2E-1:40:35:20:15:38 0/0:38:4:0:4:37:10.81%:38:5.7399E-2:39:33:13:20:39 0/0:38:4:1:3:38:10.53%:37:5.7534E-2:40:34:14:20:40 0/0:39:3:1:2:34:8.82%:37:1.194E-1:43:31:11:20:37 0/0:38:3:0:3:27:11.11%:28:1.1792E-1:39:24:16:8:28 0/0:37:6:0:6:43:13.95%:36:1.2967E-2:41:37:15:22:45 0/0:39:2:1:1:32:6.25%:40:2.4603E-1:38:30:9:21:36 0/0:35:2:0:2:30:6.67%:37:2.4576E-1:41:28:10:18:32 0/0:38:2:0:2:29:6.9%:37:2.4561E-1:36:27:9:18:31 0/0:39:3:1:2:34:8.82%:37:1.194E-1:41:31:18:13:35 0/0:43:4:0:4:49:8.16%:56:5.8654E-2:38:45:20:25:54 0/1:37:11:4:7:53:20.75%:35:2.7419E-4:44:42:21:21:53 0/0:49:2:1:1:42:4.76%:57:2.4699E-1:43:40:17:23:43 0/0:37:5:0:5:34:14.71%:27:2.6693E-2:40:29:14:15:34 0/1:40:8:3:5:35:22.86%:26:2.4931E-3:43:27:18:9:36 0/0:39:3:0:3:34:8.82%:37:1.194E-1:43:31:16:15:35 0/0:44:4:1:3:33:12.12%:32:5.6777E-2:44:29:14:15:34 0/0:38:4:2:2:37:10.81%:38:5.7399E-2:42:33:10:23:37 0/0:37:5:3:2:33:15.15%:27:2.6557E-2:40:28:13:15:35 0/0:49:2:1:1:20:10%:21:2.4359E-1:39:18:5:13:21 0/0:37:4:1:3:40:10%:40:5.7784E-2:42:36:18:18:40 0/0:38:4:1:3:37:10.81%:38:5.7399E-2:41:33:10:23:38 0/1:38:7:3:4:51:13.73%:22:6.2693E-3:38:44:18:26:51 0/0:39:2:0:2:39:5.13%:54:2.4675E-1:42:37:19:18:40 MTB_anc 2163510 . T C . PASS AC=17;AF=0.057;AN=300;ANN=C|missense_variant|MODERATE|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3802A>G|p.Ile1268Val|3802/4380|3802/4380|1268/1459||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163510T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163510T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:6:1:5:35:17.14%:25:1.238E-2:45:29:16:13:35 0/0:46:3:3:0:17:17.65%:14:1.1364E-1:51:14:7:7:17 0/0:37:5:1:4:57:8.77%:62:2.8522E-2:43:52:15:37:58 0/0:38:4:1:3:29:13.79%:26:5.5981E-2:46:25:9:16:29 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:46:34:21:13:36 0/0:39:2:1:1:19:10.53%:21:2.4324E-1:45:17:7:10:20 0/0:46:3:1:2:27:11.11%:28:1.1792E-1:50:24:10:14:27 0/0:37:4:0:4:31:12.9%:29:5.6405E-2:45:27:14:13:32 0/0:37:3:1:2:55:5.45%:73:1.2156E-1:46:52:21:31:56 0/0:43:3:0:3:31:9.68%:34:1.1885E-1:49:28:14:14:31 0/0:38:2:0:2:52:3.85%:74:2.4757E-1:45:50:20:30:52 0/1:39:7:1:6:38:18.42%:22:5.7727E-3:44:31:19:12:39 0/0:38:1:0:1:30:3.33%:44:5E-1:50:29:19:10:33 0/0:36:5:1:4:43:11.63%:41:2.764E-2:40:38:15:23:43 0/0:37:1:0:1:19:5.26%:28:5E-1:43:18:8:10:21 0/0:44:4:1:3:34:11.76%:31:5.6946E-2:44:30:17:13:34 0/0:36:3:0:3:19:15.79%:17:1.1486E-1:42:16:5:11:19 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:44:15:2:13:17 0/0:39:1:1:0:21:4.76%:31:5E-1:44:20:8:12:22 0/0:60:2:0:2:24:8.33%:27:2.4468E-1:46:22:10:12:27 0/0:31:2:1:1:19:10.53%:21:2.4324E-1:46:17:6:11:19 0/0:38:5:3:2:45:11.11%:44:2.7799E-2:44:40:21:19:51 0/0:45:3:2:1:26:11.54%:25:1.1765E-1:46:23:10:13:26 0/0:38:4:2:2:45:8.89%:50:5.8311E-2:45:41:22:19:46 0/0:49:4:1:3:31:12.9%:29:5.6405E-2:43:27:9:18:31 0/0:43:4:1:3:33:12.12%:32:5.6777E-2:44:29:13:16:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:27 0/0:37:3:2:1:26:11.54%:25:1.1765E-1:47:23:10:13:28 0/0:37:1:0:1:22:4.55%:31:5E-1:45:21:10:11:22 0/1:36:7:3:4:29:24.14%:22:5.1909E-3:43:22:7:15:30 0/0:38:4:2:2:32:12.5%:29:5.6596E-2:44:28:12:16:34 0/0:38:3:0:3:28:10.71%:28:1.1818E-1:45:25:8:17:28 0/0:37:3:2:1:36:8.33%:40:1.1972E-1:45:33:17:16:38 0/0:38:2:1:1:24:8.33%:27:2.4468E-1:44:22:12:10:25 0/0:45:6:3:3:41:14.63%:33:1.2841E-2:47:35:14:21:42 0/0:42:5:3:2:29:17.24%:22:2.5917E-2:45:24:10:14:29 0/0:38:3:2:1:32:9.38%:34:1.1905E-1:42:29:12:17:32 0/1:40:12:8:4:68:17.65%:38:1.4358E-4:45:56:27:29:69 0/0:43:5:4:1:45:11.11%:44:2.7799E-2:45:40:14:26:47 0/0:33:1:0:1:27:3.7%:41:5E-1:44:26:9:17:27 0/0:37:5:1:4:27:18.52%:19:2.5527E-2:47:22:11:11:28 0/1:38:9:3:6:47:19.15%:28:1.2811E-3:42:38:16:22:48 0/0:34:3:2:1:32:9.38%:34:1.1905E-1:43:29:12:17:33 0/0:38:4:2:2:22:18.18%:15:5.3885E-2:40:18:7:11:23 0/0:36:2:2:0:36:5.56%:47:2.4648E-1:43:34:12:22:36 0/0:42:6:1:5:33:18.18%:23:1.219E-2:44:27:16:11:33 0/0:36:2:2:0:21:9.52%:25:2.439E-1:51:19:8:11:22 0/0:43:5:1:4:45:11.11%:44:2.7799E-2:40:40:15:25:46 0/1:39:9:4:5:38:23.68%:29:1.1442E-3:47:29:14:15:38 0/0:38:5:0:5:45:11.36%:41:2.7721E-2:44:39:15:24:46 0/0:60:1:0:1:17:5.88%:24:5E-1:49:16:5:11:17 0/0:41:5:3:2:30:16.67%:21:2.6093E-2:41:25:12:13:30 0/0:38:1:0:1:21:4.76%:31:5E-1:48:20:7:13:21 0/0:37:2:0:2:27:7.41%:34:2.4528E-1:48:25:11:14:27 0/0:39:1:0:1:26:3.85%:38:5E-1:43:25:9:16:29 0/0:41:5:1:4:46:10.87%:44:2.7874E-2:38:41:15:26:49 0/0:37:4:1:3:38:10.53%:37:5.7534E-2:41:34:10:24:39 0/0:38:1:0:1:24:4.17%:34:5E-1:41:23:10:13:26 0/0:37:3:2:1:33:9.09%:37:1.1923E-1:44:30:15:15:33 0/0:42:5:1:4:46:10.87%:44:2.7874E-2:45:41:15:26:46 0/0:38:6:3:3:30:20%:18:1.186E-2:45:24:10:14:33 0/0:43:4:2:2:28:14.29%:23:5.5746E-2:44:24:14:10:28 0/1:38:9:3:6:49:18.37%:28:1.3055E-3:43:40:23:17:51 0/0:53:3:2:1:27:11.11%:28:1.1792E-1:44:24:11:13:27 0/1:40:8:5:3:23:34.78%:27:1.8791E-3:44:15:9:6:23 0/1:43:8:4:4:58:13.79%:25:3.0172E-3:41:50:23:27:58 0/0:39:1:0:1:20:5%:27:5E-1:44:19:11:8:20 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:38:2:1:1:31:6.45%:40:2.459E-1:46:29:10:19:32 0/0:49:2:1:1:38:5.26%:50:2.4667E-1:44:36:12:24:39 0/1:43:10:5:5:31:32.26%:33:4.1251E-4:46:21:6:15:32 0/0:38:1:0:1:23:4.35%:34:5E-1:49:22:9:13:25 0/0:39:2:1:1:31:6.45%:40:2.459E-1:47:29:16:13:32 0/0:38:5:1:4:42:11.9%:38:2.7555E-2:43:37:14:23:42 0/1:41:7:4:3:30:23.33%:22:5.2713E-3:50:23:11:12:30 0/0:36:3:1:2:35:8.57%:40:1.1957E-1:43:32:16:16:36 0/0:41:6:0:6:31:19.35%:20:1.1977E-2:45:25:12:13:31 0/0:38:4:1:3:28:14.29%:23:5.5746E-2:41:24:12:12:28 0/0:42:5:2:3:33:15.15%:27:2.6557E-2:45:28:11:17:33 0/0:37:6:4:2:44:13.64%:36:1.3026E-2:42:38:9:29:45 0/0:37:2:1:1:45:4.44%:64:2.4719E-1:44:43:19:24:45 0/1:41:7:5:2:28:25%:22:5.1054E-3:42:21:7:14:28 0/1:42:11:4:7:31:35.48%:37:1.6659E-4:46:20:8:12:31 0/0:33:1:0:1:22:4.55%:31:5E-1:45:21:9:12:22 0/0:38:3:1:2:25:12%:25:1.1735E-1:40:22:8:14:25 0/0:42:5:2:3:38:13.16%:32:2.7169E-2:46:33:19:14:38 0/0:38:2:0:2:26:7.69%:30:2.451E-1:47:24:12:12:27 0/1:41:8:3:5:41:19.51%:25:2.6808E-3:43:33:14:19:42 0/1:38:8:3:5:24:33.33%:27:1.949E-3:42:16:7:9:24 0/0:42:4:1:3:29:13.79%:26:5.5981E-2:45:25:9:16:29 0/0:38:3:0:3:28:10.71%:28:1.1818E-1:47:25:11:14:28 0/0:37:5:0:5:38:13.16%:32:2.7169E-2:41:33:15:18:41 0/0:43:5:0:5:30:16.67%:21:2.6093E-2:45:25:10:15:30 0/0:37:5:3:2:31:16.13%:24:2.6257E-2:42:26:11:15:31 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:38:3:0:3:23:13.04%:22:1.1667E-1:47:20:14:6:23 0/0:39:1:0:1:25:4%:38:5E-1:42:24:9:15:25 0/0:37:3:1:2:24:12.5%:22:1.1702E-1:40:21:11:10:27 0/0:36:5:2:3:31:16.13%:24:2.6257E-2:37:26:12:14:32 0/0:37:5:2:3:31:16.13%:24:2.6257E-2:45:26:11:15:31 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:42:34:16:18:41 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:20 0/0:60:1:1:0:24:4.17%:34:5E-1:41:23:9:14:24 0/0:39:1:0:1:23:4.35%:34:5E-1:41:22:14:8:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:24 0/1:38:7:3:4:38:18.42%:22:5.7727E-3:44:31:8:23:39 0/0:40:6:2:4:38:15.79%:28:1.2628E-2:44:32:13:19:38 0/0:41:4:2:2:34:11.76%:31:5.6946E-2:42:30:10:20:35 0/0:38:2:1:1:34:5.88%:43:2.4627E-1:44:32:13:19:34 0/0:38:2:0:2:27:7.41%:34:2.4528E-1:44:25:7:18:29 0/0:39:1:0:1:22:4.55%:31:5E-1:41:21:10:11:22 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:39:15:5:10:19 0/0:33:3:1:2:36:8.33%:40:1.1972E-1:44:33:14:19:37 0/0:38:3:0:3:45:6.67%:56:1.2079E-1:41:42:16:26:45 0/0:38:4:2:2:50:8%:55:5.8732E-2:42:46:25:21:51 0/0:37:3:0:3:29:10.34%:31:1.1842E-1:40:26:11:15:29 0/0:38:3:1:2:35:8.57%:40:1.1957E-1:43:32:12:20:37 0/0:39:2:0:2:22:9.09%:24:2.4419E-1:42:20:7:13:23 0/0:38:5:1:4:40:12.5%:35:2.7371E-2:40:35:17:18:41 0/0:39:2:0:2:50:4%:70:2.4747E-1:40:48:18:30:50 0/0:38:2:2:0:27:7.41%:34:2.4528E-1:41:25:12:13:28 0/0:39:1:0:1:30:3.33%:44:5E-1:44:29:13:16:30 0/0:38:4:1:3:41:9.76%:44:5.79E-2:39:37:16:21:41 0/0:37:3:1:2:42:7.14%:49:1.2048E-1:40:39:19:20:45 0/0:36:3:0:3:33:9.09%:37:1.1923E-1:39:30:17:13:33 0/0:39:2:1:1:37:5.41%:50:2.4658E-1:40:35:20:15:38 0/0:33:4:0:4:38:10.53%:37:5.7534E-2:39:34:13:21:39 0/0:38:3:1:2:37:8.11%:43:1.1986E-1:39:34:15:19:39 0/0:38:3:1:2:38:7.89%:43:1.2E-1:42:35:13:22:38 0/0:39:2:0:2:26:7.69%:30:2.451E-1:41:24:16:8:26 0/0:36:6:1:5:41:14.63%:33:1.2841E-2:42:35:14:21:43 0/0:38:2:1:1:34:5.88%:43:2.4627E-1:39:32:9:23:36 0/0:38:1:0:1:31:3.23%:48:5E-1:42:30:11:19:32 0/0:38:2:0:2:32:6.25%:40:2.4603E-1:36:30:11:19:33 0/0:39:3:1:2:36:8.33%:40:1.1972E-1:40:33:17:16:37 0/0:38:3:0:3:50:6%:62:1.2121E-1:37:47:18:29:53 0/1:37:10:4:6:51:19.61%:32:5.9987E-4:45:41:21:20:52 0/0:38:2:1:1:43:4.65%:60:2.4706E-1:43:41:17:24:43 0/0:38:4:0:4:33:12.12%:32:5.6777E-2:40:29:14:15:33 0/1:37:8:3:5:35:22.86%:26:2.4931E-3:42:27:18:9:36 0/0:38:3:0:3:33:9.09%:37:1.1923E-1:43:30:15:15:35 0/0:38:4:1:3:31:12.9%:29:5.6405E-2:44:27:13:14:33 0/0:37:4:2:2:37:10.81%:38:5.7399E-2:42:33:10:23:37 0/0:37:5:3:2:35:14.29%:30:2.6822E-2:39:30:15:15:37 0/0:48:2:1:1:21:9.52%:25:2.439E-1:39:19:6:13:22 0/0:38:4:1:3:41:9.76%:44:5.79E-2:42:37:18:19:41 0/0:38:3:1:2:35:8.57%:40:1.1957E-1:41:32:10:22:37 0/0:38:6:2:4:53:11.32%:50:1.3458E-2:39:47:22:25:54 0/0:38:2:0:2:38:5.26%:50:2.4667E-1:42:36:17:19:40 MTB_anc 2163517 . A C . PASS AC=15;AF=0.050;AN=300;ANN=C|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3795T>G|p.Gly1265Gly|3795/4380|3795/4380|1265/1459||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163517A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163517A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:3:0:3:31:9.68%:34:1.1885E-1:45:28:16:12:31 0/0:38:2:2:0:15:13.33%:16:2.4138E-1:53:13:6:7:16 0/0:38:4:0:4:59:6.78%:72:5.9309E-2:44:55:16:39:61 0/0:38:4:1:3:29:13.79%:26:5.5981E-2:46:25:10:15:29 0/0:49:2:1:1:35:5.71%:47:2.4638E-1:47:33:21:12:36 0/0:38:2:1:1:20:10%:21:2.4359E-1:44:18:7:11:20 0/0:45:3:1:2:30:10%:31:1.1864E-1:48:27:12:15:30 0/0:38:3:0:3:31:9.68%:34:1.1885E-1:45:28:14:14:31 0/0:38:2:0:2:53:3.77%:78:2.4762E-1:47:51:22:29:54 0/0:38:3:0:3:33:9.09%:37:1.1923E-1:48:30:15:15:33 0/0:38:1:0:1:51:1.96%:84:5E-1:46:50:20:30:52 0/1:38:7:1:6:36:19.44%:22:5.6667E-3:44:29:17:12:39 0/0:35:1:0:1:35:2.86%:55:5E-1:48:34:20:14:36 0/0:37:5:1:4:41:12.2%:38:2.7465E-2:41:36:15:21:43 0/0:38:1:0:1:19:5.26%:28:5E-1:43:18:7:11:21 0/0:37:4:1:3:35:11.43%:35:5.7106E-2:44:31:17:14:35 0/0:38:2:0:2:19:10.53%:21:2.4324E-1:42:17:6:11:19 0/0:34:2:1:1:18:11.11%:18:2.4286E-1:44:16:3:13:18 0/0:38:1:1:0:23:4.35%:34:5E-1:44:22:10:12:23 0/0:38:1:0:1:23:4.35%:34:5E-1:43:22:9:13:25 0/0:35:1:0:1:18:5.56%:24:5E-1:47:17:6:11:18 0/0:37:5:3:2:48:10.42%:46:2.8014E-2:45:43:23:20:50 0/0:44:3:2:1:26:11.54%:25:1.1765E-1:45:23:10:13:26 0/0:36:5:3:2:46:10.87%:44:2.7874E-2:45:41:21:20:46 0/0:49:4:1:3:32:12.5%:29:5.6596E-2:42:28:9:19:32 0/0:33:4:1:3:33:12.12%:32:5.6777E-2:44:29:13:16:34 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:35:2:2:0:23:8.7%:28:2.4444E-1:45:21:9:12:25 0/0:34:1:0:1:21:4.76%:31:5E-1:45:20:10:10:22 0/0:35:6:2:4:27:22.22%:16:1.1461E-2:42:21:6:15:28 0/0:34:4:2:2:33:12.12%:32:5.6777E-2:44:29:12:17:34 0/0:35:3:0:3:28:10.71%:28:1.1818E-1:45:25:8:17:28 0/0:35:3:2:1:37:8.11%:43:1.1986E-1:45:34:17:17:39 0/0:38:1:0:1:24:4.17%:34:5E-1:44:23:13:10:24 0/0:44:6:3:3:43:13.95%:36:1.2967E-2:48:37:14:23:43 0/0:42:5:3:2:31:16.13%:24:2.6257E-2:45:26:11:15:31 0/0:38:2:2:0:33:6.06%:44:2.4615E-1:42:31:13:18:33 0/1:37:11:7:4:62:17.74%:35:3.0055E-4:47:51:25:26:66 0/0:40:6:5:1:45:13.33%:39:1.3082E-2:44:39:14:25:45 0/0:0:0:0:0:25:0%:48:1E0:46:25:8:17:26 0/0:37:4:1:3:25:16%:21:5.4928E-2:46:21:12:9:25 0/1:37:8:2:6:47:17.02%:25:2.8249E-3:42:39:17:22:48 0/0:35:2:1:1:32:6.25%:40:2.4603E-1:43:30:11:19:34 0/0:36:4:2:2:23:17.39%:18:5.4264E-2:39:19:7:12:24 0/0:33:1:1:0:36:2.78%:55:5E-1:42:35:12:23:36 0/0:41:6:1:5:32:18.75%:20:1.2087E-2:45:26:16:10:32 0/0:37:2:2:0:23:8.7%:28:2.4444E-1:48:21:9:12:23 0/0:42:5:1:4:45:11.11%:44:2.7799E-2:40:40:15:25:45 0/1:37:8:3:5:38:21.05%:25:2.5935E-3:47:30:15:15:38 0/0:36:6:0:6:46:13.33%:39:1.3082E-2:45:39:15:24:46 0/0:60:1:0:1:17:5.88%:24:5E-1:48:16:5:11:17 0/0:42:5:3:2:29:17.24%:22:2.5917E-2:43:24:12:12:29 0/0:38:1:0:1:21:4.76%:31:5E-1:48:20:7:13:21 0/0:34:1:0:1:27:3.7%:41:5E-1:47:26:11:15:28 0/0:38:1:0:1:26:3.85%:38:5E-1:43:25:9:16:28 0/0:36:5:2:3:47:10.64%:47:2.7945E-2:38:42:15:27:48 0/0:36:3:1:2:37:8.11%:43:1.1986E-1:42:34:10:24:37 0/0:38:1:0:1:24:4.17%:34:5E-1:42:23:11:12:25 0/0:35:2:1:1:32:6.25%:40:2.4603E-1:44:30:16:14:32 0/0:41:5:1:4:47:10.64%:47:2.7945E-2:46:42:15:27:47 0/0:37:6:3:3:31:19.35%:20:1.1977E-2:46:25:9:16:33 0/0:42:4:2:2:30:13.33%:26:5.62E-2:45:26:16:10:31 0/1:37:9:3:6:46:19.57%:28:1.2682E-3:44:37:21:16:50 0/0:49:2:1:1:25:8%:31:2.449E-1:44:23:11:12:25 0/1:37:7:5:2:23:30.43%:23:4.5803E-3:45:16:10:6:24 0/1:43:7:3:4:57:12.28%:21:6.4254E-3:41:50:24:26:59 0/0:38:1:0:1:21:4.76%:31:5E-1:44:20:11:9:21 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:39 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:24 0/0:37:3:2:1:29:10.34%:31:1.1842E-1:48:26:9:17:31 0/0:49:2:1:1:39:5.13%:54:2.4675E-1:44:37:13:24:40 0/1:42:10:5:5:32:31.25%:33:4.259E-4:45:22:6:16:33 0/0:38:1:0:1:24:4.17%:34:5E-1:48:23:9:14:25 0/0:38:2:1:1:31:6.45%:40:2.459E-1:47:29:15:14:32 0/0:38:4:1:3:39:10.26%:41:5.7662E-2:43:35:13:22:41 0/0:37:6:4:2:30:20%:18:1.186E-2:51:24:12:12:30 0/0:38:2:0:2:35:5.71%:47:2.4638E-1:43:33:17:16:36 0/0:41:6:0:6:33:18.18%:23:1.219E-2:43:27:14:13:33 0/0:36:4:1:3:29:13.79%:26:5.5981E-2:42:25:13:12:29 0/0:42:4:2:2:33:12.12%:32:5.6777E-2:44:29:11:18:33 0/0:35:6:4:2:44:13.64%:36:1.3026E-2:42:38:10:28:44 0/0:34:1:0:1:42:2.38%:66:5E-1:44:41:19:22:43 0/1:39:7:5:2:30:23.33%:22:5.2713E-3:42:23:9:14:30 0/1:39:11:4:7:29:37.93%:38:1.5195E-4:47:18:8:10:30 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:37:3:1:2:27:11.11%:28:1.1792E-1:41:24:9:15:27 0/0:38:5:2:3:38:13.16%:32:2.7169E-2:46:33:19:14:38 0/0:38:2:0:2:27:7.41%:34:2.4528E-1:45:25:13:12:27 0/1:40:8:3:5:40:20%:25:2.653E-3:43:32:13:19:42 0/1:37:8:3:5:23:34.78%:27:1.8791E-3:43:15:6:9:23 0/0:49:2:1:1:29:6.9%:37:2.4561E-1:46:27:11:16:29 0/0:36:3:0:3:28:10.71%:28:1.1818E-1:47:25:11:14:28 0/0:35:5:0:5:40:12.5%:35:2.7371E-2:40:35:14:21:42 0/0:38:5:0:5:29:17.24%:22:2.5917E-2:44:24:10:14:30 0/0:36:4:2:2:30:13.33%:26:5.62E-2:43:26:12:14:31 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:38:2:0:2:22:9.09%:24:2.4419E-1:47:20:13:7:23 0/0:38:1:0:1:26:3.85%:38:5E-1:41:25:10:15:26 0/0:37:2:1:1:27:7.41%:34:2.4528E-1:41:25:13:12:28 0/0:38:3:0:3:31:9.68%:34:1.1885E-1:38:28:15:13:32 0/0:37:3:1:2:30:10%:31:1.1864E-1:46:27:12:15:30 0/0:46:2:1:1:42:4.76%:57:2.4699E-1:41:40:18:22:43 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:60:1:1:0:25:4%:38:5E-1:41:24:9:15:25 0/0:38:1:0:1:25:4%:38:5E-1:41:24:15:9:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/1:36:7:3:4:38:18.42%:22:5.7727E-3:45:31:9:22:39 0/0:40:5:2:3:38:13.16%:32:2.7169E-2:45:33:13:20:38 0/0:37:3:2:1:34:8.82%:37:1.194E-1:42:31:12:19:34 0/0:36:2:1:1:34:5.88%:43:2.4627E-1:44:32:13:19:35 0/0:36:2:0:2:28:7.14%:34:2.4545E-1:44:26:8:18:30 0/0:38:1:0:1:23:4.35%:34:5E-1:41:22:11:11:23 0/0:37:2:1:1:21:9.52%:25:2.439E-1:38:19:7:12:22 0/0:35:2:1:1:35:5.71%:47:2.4638E-1:43:33:14:19:36 0/0:34:3:0:3:44:6.82%:53:1.2069E-1:41:41:17:24:46 0/0:37:3:1:2:50:6%:62:1.2121E-1:42:47:27:20:55 0/0:36:3:0:3:30:10%:31:1.1864E-1:39:27:11:16:31 0/0:36:3:1:2:38:7.89%:43:1.2E-1:42:35:12:23:38 0/0:38:2:0:2:23:8.7%:28:2.4444E-1:41:21:8:13:24 0/0:36:5:2:3:42:11.9%:38:2.7555E-2:39:37:18:19:42 0/0:37:2:0:2:48:4.17%:67:2.4737E-1:41:46:16:30:49 0/0:29:2:2:0:25:8%:31:2.449E-1:43:23:11:12:26 0/0:34:1:0:1:30:3.33%:44:5E-1:43:29:13:16:31 0/0:36:4:1:3:40:10%:40:5.7784E-2:40:36:15:21:42 0/0:34:2:1:1:40:5%:53:2.4684E-1:41:38:17:21:46 0/0:36:2:0:2:31:6.45%:40:2.459E-1:41:29:16:13:33 0/0:38:2:1:1:38:5.26%:50:2.4667E-1:41:36:21:15:40 0/0:37:4:0:4:38:10.53%:37:5.7534E-2:40:34:13:21:40 0/0:35:3:1:2:38:7.89%:43:1.2E-1:40:35:16:19:39 0/0:38:3:1:2:35:8.57%:40:1.1957E-1:42:32:10:22:38 0/0:38:2:0:2:25:8%:31:2.449E-1:40:23:16:7:28 0/0:36:5:0:5:45:11.11%:44:2.7799E-2:41:40:16:24:47 0/0:35:2:1:1:38:5.26%:50:2.4667E-1:38:36:12:24:39 0/0:33:1:0:1:29:3.45%:45:5E-1:41:28:11:17:31 0/0:35:2:0:2:32:6.25%:40:2.4603E-1:36:30:10:20:33 0/0:38:3:1:2:34:8.82%:37:1.194E-1:41:31:14:17:36 0/0:36:3:0:3:52:5.77%:66:1.2136E-1:37:49:20:29:53 0/1:37:7:3:4:48:14.58%:22:6.1774E-3:45:41:22:19:49 0/0:38:2:1:1:43:4.65%:60:2.4706E-1:42:41:17:24:43 0/0:34:4:0:4:33:12.12%:32:5.6777E-2:40:29:14:15:33 0/0:38:5:2:3:32:15.62%:24:2.6412E-2:42:27:18:9:34 0/0:38:3:0:3:33:9.09%:37:1.1923E-1:45:30:15:15:35 0/0:35:4:1:3:34:11.76%:31:5.6946E-2:43:30:14:16:34 0/0:36:4:2:2:37:10.81%:38:5.7399E-2:43:33:10:23:37 0/0:35:4:3:1:34:11.76%:31:5.6946E-2:40:30:14:16:37 0/0:46:2:1:1:21:9.52%:25:2.439E-1:38:19:6:13:22 0/0:37:4:1:3:39:10.26%:41:5.7662E-2:43:35:17:18:40 0/0:36:3:1:2:39:7.69%:47:1.2013E-1:41:36:12:24:40 0/1:36:7:3:4:53:13.21%:21:6.3251E-3:39:46:20:26:53 0/0:35:2:0:2:40:5%:53:2.4684E-1:42:38:19:19:40 MTB_anc 2163520 . G A . PASS AC=12;AF=0.040;AN=300;ANN=A|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3792C>T|p.Phe1264Phe|3792/4380|3792/4380|1264/1459||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163520G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163520G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:3:0:3:30:10%:31:1.1864E-1:46:27:16:11:31 0/0:38:2:2:0:16:12.5%:15:2.4194E-1:52:14:7:7:16 0/0:39:4:0:4:60:6.67%:71:5.9362E-2:44:56:17:39:62 0/0:38:4:1:3:28:14.29%:23:5.5494E-2:47:23:9:14:29 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:48:34:21:13:36 0/0:38:2:1:1:20:10%:21:2.4359E-1:44:18:7:11:20 0/0:46:3:1:2:31:9.68%:34:1.1885E-1:48:28:13:15:31 0/0:39:3:0:3:32:9.38%:34:1.1905E-1:46:29:14:15:32 0/0:39:2:0:2:54:3.7%:77:2.4766E-1:47:52:23:29:54 0/0:39:3:0:3:32:9.38%:34:1.1905E-1:49:29:14:15:32 0/0:38:1:0:1:52:1.92%:83:5E-1:46:51:21:30:52 0/1:38:7:1:6:39:17.95%:22:5.8219E-3:43:32:20:12:39 0/0:37:1:0:1:34:2.94%:51:5E-1:47:33:18:15:35 0/0:38:6:1:5:43:13.95%:36:1.2967E-2:42:37:15:22:43 0/0:39:1:0:1:20:5%:27:5E-1:43:19:8:11:21 0/0:38:4:1:3:35:11.43%:35:5.7106E-2:45:31:17:14:35 0/0:37:2:0:2:19:10.53%:21:2.4324E-1:42:17:6:11:19 0/0:39:1:1:0:17:5.88%:24:5E-1:44:16:3:13:17 0/0:39:1:1:0:23:4.35%:34:5E-1:46:22:10:12:23 0/0:39:1:0:1:23:4.35%:34:5E-1:44:22:9:13:25 0/0:37:1:0:1:18:5.56%:24:5E-1:45:17:6:11:18 0/0:37:5:3:2:48:10.42%:46:2.8014E-2:45:43:23:20:48 0/0:45:3:2:1:26:11.54%:25:1.1765E-1:46:23:10:13:26 0/0:38:3:1:2:44:6.82%:53:1.2069E-1:45:41:21:20:45 0/0:43:4:1:3:32:12.5%:29:5.6596E-2:42:28:9:19:32 0/0:38:4:1:3:32:12.5%:29:5.6596E-2:45:28:13:15:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:8:18:27 0/0:36:1:1:0:23:4.35%:34:5E-1:46:22:10:12:23 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:34:6:2:4:27:22.22%:16:1.1461E-2:44:21:7:14:28 0/0:37:4:2:2:33:12.12%:32:5.6777E-2:45:29:12:17:34 0/0:37:3:0:3:29:10.34%:31:1.1842E-1:46:26:8:18:29 0/0:37:1:1:0:38:2.63%:58:5E-1:44:37:20:17:38 0/0:39:1:0:1:23:4.35%:34:5E-1:46:22:13:9:24 0/0:45:6:3:3:43:13.95%:36:1.2967E-2:49:37:14:23:43 0/0:38:4:2:2:31:12.9%:29:5.6405E-2:45:27:11:16:31 0/0:38:2:2:0:33:6.06%:44:2.4615E-1:42:31:14:17:34 0/1:38:9:7:2:63:14.29%:28:1.4373E-3:47:54:26:28:64 0/0:42:5:4:1:46:10.87%:44:2.7799E-2:45:40:14:26:47 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:39:4:1:3:25:16%:21:5.4928E-2:46:21:12:9:25 0/1:40:9:3:6:48:18.75%:28:1.2935E-3:42:39:16:23:49 0/0:37:3:2:1:31:9.68%:34:1.1885E-1:44:28:9:19:33 0/0:38:3:2:1:24:12.5%:22:1.1702E-1:40:21:8:13:24 0/0:37:1:1:0:35:2.86%:55:5E-1:43:34:12:22:35 0/0:41:6:1:5:32:18.75%:20:1.2087E-2:45:26:16:10:32 0/0:33:2:2:0:22:9.09%:24:2.4419E-1:50:20:8:12:23 0/0:41:5:1:4:45:11.11%:44:2.7799E-2:42:40:15:25:45 0/1:36:7:2:5:37:18.92%:22:5.721E-3:48:30:15:15:37 0/0:37:5:0:5:45:11.11%:44:2.7799E-2:46:40:16:24:45 0/0:60:1:0:1:17:5.88%:24:5E-1:48:16:5:11:17 0/0:42:5:3:2:30:16.67%:21:2.6093E-2:43:25:13:12:30 0/0:37:1:0:1:22:4.55%:31:5E-1:48:21:8:13:22 0/0:37:1:0:1:27:3.7%:41:5E-1:47:26:12:14:28 0/0:39:1:0:1:28:3.57%:41:5E-1:45:26:10:16:29 0/0:37:4:1:3:46:8.7%:49:5.8402E-2:38:42:15:27:47 0/0:37:3:1:2:38:7.89%:43:1.2E-1:42:35:11:24:38 0/0:38:1:0:1:23:4.35%:34:5E-1:43:22:11:11:23 0/0:36:2:1:1:33:6.06%:44:2.4615E-1:44:31:17:14:33 0/0:36:4:1:3:45:8.89%:50:5.8311E-2:47:41:14:27:46 0/0:37:6:3:3:31:19.35%:20:1.1977E-2:46:25:10:15:32 0/0:45:3:2:1:30:10%:31:1.1864E-1:45:27:16:11:30 0/1:37:9:3:6:48:18.75%:28:1.2935E-3:44:39:22:17:50 0/0:49:2:1:1:26:7.69%:30:2.451E-1:44:24:12:12:26 0/0:38:6:4:2:24:25%:11:1.0968E-2:44:18:10:8:24 0/1:38:7:3:4:58:12.07%:21:6.4484E-3:42:51:24:27:58 0/0:39:1:0:1:21:4.76%:31:5E-1:45:20:11:9:21 0/0:0:0:0:0:40:0%:74:1E0:47:40:17:23:40 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:35:3:2:1:31:9.68%:31:1.1864E-1:47:27:9:18:31 0/0:49:2:1:1:38:5.26%:50:2.4667E-1:45:36:12:24:40 0/1:42:10:5:5:32:31.25%:33:4.259E-4:47:22:6:16:33 0/0:37:1:0:1:24:4.17%:34:5E-1:48:23:9:14:25 0/0:39:2:1:1:31:6.45%:40:2.459E-1:47:29:15:14:32 0/0:38:4:1:3:40:10%:40:5.7784E-2:43:36:15:21:40 0/0:38:6:4:2:30:20%:18:1.186E-2:52:24:12:12:30 0/0:39:2:0:2:33:6.06%:44:2.4615E-1:44:31:16:15:36 0/0:42:6:0:6:32:18.75%:20:1.2087E-2:44:26:13:13:33 0/0:38:4:1:3:30:13.33%:26:5.62E-2:42:26:14:12:30 0/0:43:4:2:2:32:12.5%:29:5.6596E-2:45:28:11:17:32 0/0:37:5:4:1:43:11.63%:41:2.764E-2:43:38:10:28:43 0/0:37:1:0:1:42:2.38%:66:5E-1:45:41:19:22:43 0/0:42:5:3:2:28:17.86%:19:2.5729E-2:42:23:9:14:28 0/1:39:11:4:7:31:35.48%:37:1.6659E-4:47:20:9:11:31 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:38:3:1:2:28:10.71%:28:1.1818E-1:41:25:10:15:28 0/0:40:5:2:3:38:13.16%:32:2.7169E-2:47:33:19:14:38 0/0:36:2:0:2:26:7.69%:30:2.451E-1:47:24:13:11:26 0/1:41:8:3:5:42:19.05%:25:2.7074E-3:45:34:16:18:43 0/1:37:8:3:5:23:34.78%:27:1.8791E-3:45:15:6:9:23 0/0:49:2:1:1:29:6.9%:37:2.4561E-1:46:27:11:16:29 0/0:38:2:0:2:27:7.41%:34:2.4528E-1:48:25:11:14:27 0/0:37:5:0:5:40:12.5%:35:2.7371E-2:41:35:15:20:41 0/0:39:5:0:5:29:17.24%:22:2.5917E-2:46:24:10:14:30 0/0:39:2:1:1:29:6.9%:37:2.4561E-1:42:27:12:15:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:38:2:0:2:23:8.7%:28:2.4444E-1:47:21:14:7:23 0/0:39:1:0:1:24:4.17%:34:5E-1:42:23:9:14:24 0/0:38:2:1:1:27:7.41%:34:2.4528E-1:41:25:13:12:28 0/0:37:4:1:3:30:13.33%:26:5.62E-2:38:26:15:11:30 0/0:37:3:1:2:30:10%:31:1.1864E-1:46:27:12:15:31 0/0:48:2:1:1:42:4.76%:57:2.4699E-1:42:40:18:22:43 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:60:1:1:0:27:3.7%:41:5E-1:41:26:10:16:27 0/0:37:1:0:1:27:3.7%:41:5E-1:40:26:15:11:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/1:37:7:3:4:38:18.42%:22:5.7727E-3:45:31:9:22:39 0/0:41:5:2:3:38:13.16%:32:2.7169E-2:44:33:13:20:38 0/0:36:3:2:1:34:8.82%:37:1.194E-1:42:31:12:19:34 0/0:37:2:1:1:36:5.56%:47:2.4648E-1:44:34:13:21:36 0/0:37:2:0:2:31:6.45%:40:2.459E-1:43:29:9:20:31 0/0:39:1:0:1:22:4.55%:31:5E-1:42:21:10:11:23 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:39:20:8:12:23 0/0:38:1:0:1:36:2.78%:55:5E-1:43:35:15:20:37 0/0:37:3:0:3:47:6.38%:59:1.2097E-1:41:44:18:26:47 0/0:39:3:1:2:54:5.56%:69:1.215E-1:41:51:28:23:55 0/0:38:2:0:2:31:6.45%:40:2.459E-1:39:29:13:16:32 0/0:37:3:1:2:38:7.89%:43:1.2E-1:43:35:12:23:38 0/0:38:2:0:2:23:8.7%:28:2.4444E-1:40:21:8:13:23 0/0:38:5:2:3:44:11.36%:41:2.7721E-2:39:39:19:20:44 0/0:38:2:0:2:51:3.92%:74:2.4752E-1:41:49:18:31:51 0/0:38:1:1:0:25:4%:38:5E-1:43:24:11:13:26 0/0:39:1:0:1:31:3.23%:48:5E-1:43:30:13:17:31 0/0:37:4:1:3:41:9.76%:44:5.79E-2:40:37:17:20:42 0/0:36:2:1:1:43:4.65%:60:2.4706E-1:42:41:20:21:46 0/0:38:2:0:2:32:6.25%:40:2.4603E-1:39:30:17:13:33 0/0:38:2:1:1:40:5%:53:2.4684E-1:40:38:22:16:41 0/0:38:4:0:4:40:10%:40:5.7784E-2:40:36:15:21:40 0/0:36:3:1:2:40:7.5%:46:1.2025E-1:40:37:17:20:40 0/0:38:3:1:2:38:7.89%:43:1.2E-1:41:35:13:22:38 0/0:38:2:0:2:26:7.69%:30:2.451E-1:40:24:16:8:27 0/0:38:4:0:4:43:9.3%:47:5.8115E-2:41:39:16:23:46 0/0:38:2:1:1:39:5.13%:54:2.4675E-1:38:37:12:25:39 0/0:37:1:0:1:32:3.12%:48:5E-1:41:31:13:18:32 0/0:39:1:0:1:30:3.33%:44:5E-1:37:29:10:19:31 0/0:38:3:1:2:36:8.33%:40:1.1972E-1:41:33:17:16:37 0/0:38:3:0:3:51:5.88%:66:1.2129E-1:38:48:20:28:52 0/1:37:7:3:4:49:14.29%:22:6.2092E-3:45:42:22:20:49 0/0:38:2:1:1:44:4.55%:60:2.4713E-1:42:42:18:24:44 0/0:37:3:0:3:34:8.82%:37:1.194E-1:40:31:15:16:34 0/0:38:5:2:3:33:15.15%:27:2.6557E-2:43:28:19:9:34 0/0:38:3:0:3:34:8.82%:37:1.194E-1:44:31:16:15:35 0/0:38:3:1:2:34:8.82%:37:1.194E-1:44:31:15:16:34 0/0:37:4:2:2:37:10.81%:38:5.7399E-2:43:33:10:23:37 0/0:37:3:2:1:34:8.82%:37:1.194E-1:40:31:16:15:36 0/0:60:1:1:0:19:5.26%:28:5E-1:39:18:6:12:21 0/0:38:4:1:3:38:10.53%:37:5.7534E-2:43:34:16:18:38 0/0:37:3:1:2:39:7.69%:47:1.2013E-1:41:36:12:24:40 0/0:38:6:2:4:53:11.32%:50:1.3458E-2:39:47:21:26:53 0/0:38:2:0:2:40:5%:53:2.4684E-1:42:38:19:19:40 MTB_anc 2163730 . GATCGGACCGACACCACCCAGCGCGTTCAGGCTCAACGGAATACCAGGAATAGTAATATCAGGCACCACA G . PASS AC=21;AF=0.070;AN=300;ANN=G|disruptive_inframe_deletion|MODERATE|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3513_3581delTGTGGTGCCTGATATTACTATTCCTGGTATTCCGTTGAGCCTGAACGCGCTGGGTGGTGTCGGTCCGAT|p.Val1172_Ile1194del|3581/4380|3513/4380|1171/1459||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163731_2163799delATCGGACCGACACCACCCAGCGCGTTCAGGCTCAACGGAATACCAGGAATAGTAATATCAGGCACCACA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163731_2163799delATCGGACCGACACCACCCAGCGCGTTCAGGCTCAACGGAATACCAGGAATAGTAATATCAGGCACCACA||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:22 0/0:0:0:0:0:15:0%:29:1E0:43:15:9:6:15 0/0:39:1:0:1:48:2.08%:76:5E-1:46:47:20:27:48 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/1:46:18:8:10:32:56.25%:68:1.3089E-7:43:14:11:3:32 0/0:0:0:0:0:12:0%:21:1E0:42:12:5:7:12 0/0:0:0:0:0:24:0%:44:1E0:42:24:18:6:24 0/1:45:14:8:6:22:63.64%:55:2.7817E-6:38:8:5:3:22 0/0:0:0:0:0:49:0%:93:1E0:50:49:32:17:49 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:38:1:0:1:40:2.5%:62:5E-1:42:39:21:18:40 0/1:42:14:5:9:20:70%:57:1.6702E-6:42:6:5:1:21 0/0:0:0:0:0:30:0%:55:1E0:50:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:13:0%:25:1E0:41:13:6:7:14 0/1:46:15:7:8:23:62.5%:59:1.196E-6:40:9:4:5:24 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:10:0%:17:1E0:39:10:9:1:10 0/1:43:11:6:5:19:57.89%:42:6.2811E-5:38:8:4:4:19 0/0:0:0:0:0:14:0%:25:1E0:43:14:5:9:14 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:39:1:0:1:15:6.67%:21:5E-1:48:14:12:2:17 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:36 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:22:0%:40:1E0:46:22:16:6:23 0/0:0:0:0:0:15:0%:29:1E0:42:15:9:6:15 0/0:0:0:0:0:17:0%:33:1E0:46:17:11:6:17 0/0:38:1:0:1:20:5%:27:5E-1:44:19:10:9:21 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:14 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:19 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:30 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:30:0%:55:1E0:38:30:20:10:31 0/0:0:0:0:0:58:0%:99:1E0:42:58:31:27:58 0/1:44:25:12:13:35:71.43%:99:2.8437E-11:41:10:6:4:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/1:40:18:9:9:24:69.23%:74:3.6611E-8:36:8:7:1:26 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:26 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:21 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:25 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:27 0/0:38:1:0:1:44:2.27%:69:5E-1:41:43:29:14:45 0/1:47:9:4:5:14:64.29%:35:2.8986E-4:54:5:2:3:14 0/1:41:19:7:12:25:73.08%:80:8.6144E-9:36:7:4:3:26 0/0:0:0:0:0:18:0%:32:1E0:46:18:13:5:18 0/1:42:19:8:11:26:73.08%:80:8.6144E-9:50:7:5:2:27 0/0:49:2:1:1:28:7.14%:34:2.4545E-1:46:26:16:10:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/1:46:15:6:9:19:78.95%:66:2.5053E-7:34:4:2:2:19 0/0:0:0:0:0:25:0%:48:1E0:41:25:19:6:25 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:14:0%:25:1E0:42:14:4:10:14 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:26 0/1:43:19:11:8:25:73.08%:80:8.6144E-9:42:7:4:3:26 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:39:1:0:1:55:1.82%:91:5E-1:43:54:35:19:55 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:17 0/1:46:18:9:9:29:62.07%:71:7.6888E-8:37:11:5:6:29 0/0:0:0:0:0:14:0%:25:1E0:44:14:6:8:14 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:30 0/0:0:0:0:0:16:0%:29:1E0:50:16:5:11:16 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/1:47:24:10:14:34:70.59%:99:8.7205E-11:48:10:5:5:34 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:27 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/1:39:13:8:5:20:65%:51:6.4422E-6:41:7:2:5:20 0/1:43:15:6:9:20:75%:64:3.8543E-7:46:5:4:1:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:41 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:21 0/1:45:18:10:8:29:62.07%:71:7.6888E-8:43:11:9:2:29 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:32 0/0:0:0:0:0:14:0%:25:1E0:40:14:9:5:14 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:17:0%:33:1E0:43:17:6:11:17 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:28 0/1:38:19:11:8:26:73.08%:80:8.6144E-9:36:7:4:3:26 0/1:39:26:13:13:32:78.79%:99:2.5824E-12:37:7:3:4:33 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:20 0/0:0:0:0:0:16:0%:29:1E0:39:16:11:5:17 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:60:1:1:0:35:2.86%:55:5E-1:41:34:19:15:37 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:20 0/0:0:0:0:0:29:0%:55:1E0:42:29:22:7:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:14:8:22 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:5:18:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:24:10:35 0/1:47:18:11:7:28:64.29%:72:6.1806E-8:47:10:4:6:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/1:41:18:9:9:24:75%:77:1.8413E-8:38:6:5:1:24 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:34 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:37 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:24 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:16 0/0:0:0:0:0:39:0%:74:1E0:38:39:22:17:40 0/0:0:0:0:0:51:0%:97:1E0:40:51:29:22:52 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:29:0%:55:1E0:38:29:19:10:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:26 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:33:0%:63:1E0:37:33:25:8:35 0/0:0:0:0:0:24:0%:44:1E0:37:24:16:8:25 0/0:0:0:0:0:26:0%:47:1E0:36:26:15:11:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:7:19:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:22 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:30 0/0:0:0:0:0:15:0%:29:1E0:43:15:4:11:16 0/0:60:1:1:0:27:3.7%:41:5E-1:40:26:12:14:30 0/0:0:0:0:0:48:0%:89:1E0:37:48:15:33:49 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:37:1:1:0:41:2.44%:66:5E-1:43:40:18:22:42 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:24 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:31 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:15 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:32 0/0:60:1:1:0:30:3.33%:44:5E-1:41:29:16:13:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 MTB_anc 2163790 . A C . PASS AC=250;AF=1.00;AN=250;ANN=C|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.3522T>G|p.Pro1174Pro|3522/4380|3522/4380|1174/1459||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2163790A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2163790A>C||||||;HET=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:23:10:13:25:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:51:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:23:13:10:24:100%:99:1.2146E-13:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:10:8:2:11:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:21:10:11:22:95.45%:99:1.0931E-11:60:1:1:0:23 1/1:39:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 ./.:.:.:.:.:.:.:.:.:.:.:.:.:25 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:31:18:13:32:100%:99:2.1486E-18:0:0:0:0:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 1/1:46:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 1/1:38:13:10:3:14:92.86%:64:3.7391E-7:27:1:0:1:17 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 1/1:42:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:37:24:13:38:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 1/1:46:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:24 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:26 1/1:42:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:48:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:41:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:35:11:24:36:97.22%:99:8.3613E-20:39:1:0:1:36 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 MTB_anc 2165401 . T G . PASS AC=286;AF=0.986;AN=290;ANN=G|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.1911A>C|p.Gly637Gly|1911/4380|1911/4380|637/1459||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2165401T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2165401T>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:19:9:10:20:100%:99:2.8292E-11:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:32:15:17:33:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:13:1:12:14:92.86%:64:3.7391E-7:32:1:1:0:14 1/1:38:14:9:5:16:93.33%:69:1.0315E-7:29:1:0:1:16 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:24:11:13:26:96%:99:2.0568E-13:29:1:1:0:27 1/1:38:18:8:10:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:22:11:11:23:95.65%:99:4.7526E-13:0:0:0:0:25 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 0/1:44:9:4:5:11:81.82%:39:1.1057E-4:32:2:2:0:12 1/1:41:21:8:13:23:100%:99:1.8578E-12:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:20:9:11:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:20:7:13:21:95.24%:99:4.0873E-11:60:1:1:0:22 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:20:5:15:21:95.24%:99:7.2544E-12:0:0:0:0:22 1/1:40:15:11:4:16:93.75%:75:2.8282E-8:39:1:0:1:18 1/1:44:14:10:4:15:93.33%:69:1.0315E-7:60:1:0:1:17 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:19:8:11:20:95%:98:1.5234E-10:60:1:0:1:23 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:11:3:8:12:91.67%:53:4.8074E-6:37:1:1:0:12 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 0/1:38:13:5:8:17:81.25%:57:1.6121E-6:56:3:1:2:20 1/1:37:26:12:14:27:96.3%:99:1.4382E-14:36:1:1:0:29 1/1:35:24:12:12:25:96%:99:2.0568E-13:32:1:1:0:28 1/1:38:21:8:13:23:91.3%:99:1.0931E-11:20:1:1:0:24 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:40:31:14:17:33:93.94%:99:8.2416E-17:34:2:1:1:35 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:21:11:10:22:95.45%:99:1.0931E-11:49:1:0:1:23 0/1:36:13:7:6:17:86.67%:60:8.7675E-7:36:2:2:0:17 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:45:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:40:15:7:8:16:93.75%:75:2.8282E-8:37:1:1:0:16 1/1:37:28:11:17:29:96.55%:99:9.9776E-16:34:1:1:0:31 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:35:9:5:4:10:90%:42:5.9538E-5:36:1:0:1:10 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:33:20:13:34:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:29:14:15:30:96.67%:99:2.6212E-16:26:1:0:1:32 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:38:20:10:10:22:90.91%:98:1.3117E-10:30:2:2:0:24 1/1:39:18:8:10:19:100%:99:1.1019E-10:0:0:0:0:23 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:41:23:11:12:24:95.83%:99:7.7525E-13:38:1:0:1:25 1/1:35:13:4:9:14:92.86%:64:3.7391E-7:60:1:1:0:18 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:13:2:11:14:92.86%:64:3.7391E-7:31:1:1:0:16 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:21 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:9:3:6:10:90%:42:5.9538E-5:60:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:14:4:10:17:93.33%:69:1.0315E-7:60:1:0:1:20 1/1:37:12:7:5:13:92.31%:58:1.3461E-6:33:1:1:0:15 1/1:39:28:11:17:29:96.55%:99:9.9776E-16:39:1:1:0:30 1/1:38:11:5:6:12:91.67%:53:4.8074E-6:38:1:1:0:13 1/1:42:28:14:14:30:93.33%:99:4.194E-15:33:2:2:0:32 1/1:44:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:12:2:10:12:100%:64:3.698E-7:0:0:0:0:15 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:19:8:11:20:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:12:5:7:13:92.31%:64:3.698E-7:0:0:0:0:14 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:39:8:6:2:9:88.89%:36:2.0568E-4:37:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:22 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:21:11:10:24:91.3%:99:3.6437E-11:31:2:1:1:26 1/1:36:11:7:4:12:100%:58:1.4176E-6:0:0:0:0:15 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:37:7:1:6:8:100%:35:2.9138E-4:0:0:0:0:10 1/1:35:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:16 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:30:16:14:31:100%:99:8.4556E-18:0:0:0:0:35 1/1:39:38:21:17:39:97.44%:99:1.4697E-21:39:1:1:0:43 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:27:10:17:28:96.43%:99:3.7915E-15:38:1:1:0:29 1/1:34:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:33:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:13:5:8:14:92.86%:64:3.7391E-7:39:1:0:1:16 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:34:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:21 1/1:35:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:36:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:22:9:13:23:95.65%:99:2.9149E-12:39:1:0:1:24 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:16:10:6:17:94.12%:81:7.7134E-9:37:1:0:1:19 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:20:6:14:21:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:36:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 2165503 . T A . PASS AC=293;AF=0.983;AN=298;ANN=A|synonymous_variant|LOW|PPE34_Rv1917c|gene1954|transcript|Transcript_gene1954|Coding|1/1|c.1809A>T|p.Ala603Ala|1809/4380|1809/4380|603/1459||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2165503T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2165503T>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:24:9:15:25:96%:99:2.0568E-13:39:1:1:0:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:17:8:27:92.59%:99:2.0853E-13:42:2:1:1:27 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:14:7:7:15:93.33%:69:1.0315E-7:60:1:0:1:16 1/1:47:30:12:18:31:96.77%:99:6.8754E-17:51:1:0:1:36 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:30 1/1:47:29:12:17:31:93.55%:99:1.1344E-15:40:2:0:2:36 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:49:17:9:8:18:94.44%:86:2.0936E-9:28:1:1:0:21 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:39:12:5:7:13:92.31%:58:1.3461E-6:25:1:1:0:14 1/1:43:19:11:8:20:95%:98:1.5234E-10:25:1:1:0:24 1/1:40:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:45:22:10:12:23:95.65%:99:2.9149E-12:38:1:1:0:24 1/1:41:14:4:10:15:93.33%:69:1.0315E-7:37:1:1:0:16 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:21 1/1:41:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:22:10:12:23:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:38:20:4:16:22:90.91%:98:1.3117E-10:30:2:1:1:22 0/1:48:7:5:2:9:77.78%:29:1.1312E-3:49:2:1:1:10 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:42:26:14:12:27:96.3%:99:1.4382E-14:34:1:1:0:28 1/1:42:16:5:11:17:94.12%:81:7.7134E-9:37:1:1:0:18 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:20:9:11:21:95.24%:99:4.0873E-11:21:1:0:1:23 1/1:40:24:8:16:25:96%:99:2.0568E-13:34:1:1:0:27 1/1:37:27:11:16:28:100%:99:5.1363E-16:0:0:0:0:32 1/1:42:21:9:12:22:95.45%:99:1.0931E-11:60:1:1:0:32 1/1:42:44:22:22:45:97.78%:99:4.4304E-25:21:1:1:0:50 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:16:7:9:17:94.12%:81:7.7134E-9:37:1:0:1:22 1/1:41:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:25 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 0/1:41:15:5:10:18:83.33%:68:1.4655E-7:33:3:2:1:21 1/1:42:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:42:13:8:5:14:92.86%:64:3.7391E-7:33:1:0:1:14 1/1:38:23:10:13:24:95.83%:99:7.7525E-13:38:1:1:0:26 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:48 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:8:12:21:95.24%:99:4.0873E-11:25:1:1:0:21 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:17:7:10:18:94.44%:86:2.0936E-9:60:1:1:0:20 1/1:42:24:11:13:25:96%:99:2.0568E-13:33:1:1:0:29 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:45:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:14 1/1:42:28:16:12:29:96.55%:99:9.9776E-16:38:1:0:1:32 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:37:17:20:38:97.37%:99:5.6582E-21:34:1:1:0:40 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:24:14:10:25:96%:99:2.0568E-13:27:1:1:0:28 1/1:45:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:28 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:45:14:6:8:15:93.33%:69:1.0315E-7:21:1:1:0:16 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:20:7:13:21:95.24%:99:4.0873E-11:25:1:1:0:26 1/1:41:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:29 1/1:39:19:6:13:20:95%:98:1.5234E-10:34:1:1:0:23 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:13:6:7:14:92.86%:64:3.7391E-7:60:1:0:1:18 0/1:41:15:6:9:17:88.24%:71:7.3277E-8:42:2:1:1:21 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:27:12:15:28:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:43:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:43:27:13:14:28:96.43%:99:3.7915E-15:36:1:0:1:32 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:15:7:8:16:93.75%:75:2.8282E-8:30:1:1:0:20 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:30:15:15:31:96.77%:99:6.8754E-17:24:1:1:0:33 1/1:42:22:8:14:23:95.65%:99:2.9149E-12:21:1:1:0:26 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:16:8:8:17:94.12%:81:7.7134E-9:49:1:0:1:17 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:12:5:7:13:92.31%:58:1.3461E-6:25:1:1:0:15 1/1:41:33:20:13:34:97.06%:99:1.2301E-18:37:1:1:0:43 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:34:16:18:36:94.44%:99:1.5887E-18:31:2:2:0:42 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:22:9:13:23:95.65%:99:2.9149E-12:25:1:1:0:26 0/1:40:13:6:7:15:86.67%:60:8.7675E-7:33:2:2:0:16 1/1:38:28:17:11:29:96.55%:99:9.9776E-16:25:1:0:1:31 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:27:12:15:28:96.43%:99:3.7915E-15:30:1:1:0:32 1/1:37:14:7:7:15:93.33%:69:1.0315E-7:34:1:0:1:19 1/1:36:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:21:11:10:22:95.45%:99:1.0931E-11:38:1:0:1:24 0/1:39:17:8:9:19:89.47%:82:5.9414E-9:49:2:2:0:26 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:36:19:9:10:20:95%:98:1.5234E-10:33:1:0:1:22 1/1:34:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:25:13:12:27:92.59%:99:2.0853E-13:35:2:1:1:28 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:25:13:12:26:96.15%:99:5.4444E-14:25:1:1:0:28 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:40:27:12:15:28:96.43%:99:3.7915E-15:26:1:1:0:30 1/1:45:12:6:6:13:92.31%:58:1.3461E-6:38:1:1:0:17 1/1:41:24:20:4:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:21:11:10:23:91.3%:99:3.6437E-11:35:2:2:0:28 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:25:5:20:26:96.15%:99:5.4444E-14:34:1:1:0:26 1/1:40:20:12:8:22:90.91%:98:1.3117E-10:38:2:0:2:25 1/1:40:47:22:25:48:97.92%:99:7.6145E-27:30:1:0:1:53 1/1:40:31:12:19:32:96.88%:99:1.8007E-17:25:1:1:0:36 MTB_anc 2167926 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PPE35_Rv1918c|gene1955|transcript|Transcript_gene1955|Coding|1/1|c.2687C>T|p.Ser896Leu|2687/2964|2687/2964|896/987||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2167926G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2167926G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:18:16:35:97.14%:99:3.2089E-19:60:1:0:1:36 1/1:50:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:51:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:60:25:35:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:53:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:61:24:37:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:63:27:36:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 2169775 . C T . PASS AC=100;AF=0.333;AN=300;ANN=T|missense_variant|MODERATE|PPE35_Rv1918c|gene1955|transcript|Transcript_gene1955|Coding|1/1|c.838G>A|p.Ala280Thr|838/2964|838/2964|280/987||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2169775C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2169775C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:36 0/0:0:0:0:0:12:0%:21:1E0:43:12:2:10:13 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:29 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:27:0%:52:1E0:48:27:7:20:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:21:9:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:26:15:42 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:21 0/0:0:0:0:0:14:0%:25:1E0:41:14:7:7:14 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:45 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:23:10:33 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:60:1:1:0:28:3.57%:41:5E-1:39:27:13:14:28 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:25:0%:48:1E0:45:25:19:6:25 1/1:49:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:52:0%:96:1E0:45:52:27:25:52 1/1:46:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:27:15:43 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:16 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:22 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:42 0/0:0:0:0:0:45:0%:85:1E0:44:45:28:17:45 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:29 0/0:60:1:1:0:30:3.33%:44:5E-1:46:29:14:15:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:47 0/0:33:1:0:1:45:2.22%:73:5E-1:46:44:18:26:45 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:14:0%:25:1E0:42:14:9:5:14 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:48 0/0:0:0:0:0:27:0%:52:1E0:49:27:8:19:27 0/0:0:0:0:0:42:0%:77:1E0:46:42:24:18:42 0/0:0:0:0:0:11:0%:22:1E0:45:11:8:3:12 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:32 0/0:37:1:0:1:37:2.7%:59:5E-1:48:36:15:21:37 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:16 0/0:0:0:0:0:39:0%:74:1E0:49:39:15:24:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 1/1:41:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:36 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:18 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:32 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:37:2:1:1:20:10%:21:2.4359E-1:42:18:8:10:20 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:23 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:21 0/0:0:0:0:0:50:0%:92:1E0:41:50:28:22:50 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:48 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:22 1/1:39:28:15:13:29:96.55%:99:9.9776E-16:39:1:1:0:31 1/1:40:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:20:6:26 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:44:33:11:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:21 0/0:0:0:0:0:65:0%:99:1E0:41:65:43:22:66 0/0:0:0:0:0:60:0%:99:1E0:43:60:42:18:64 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:42:0%:77:1E0:37:42:25:17:43 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:46:0%:85:1E0:39:46:31:15:46 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:38 0/0:0:0:0:0:24:0%:44:1E0:37:24:15:9:25 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:41:0%:78:1E0:39:41:25:16:43 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:26:9:35 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:23 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:39:1:1:0:30:3.33%:44:5E-1:45:29:15:14:30 0/0:0:0:0:0:47:0%:89:1E0:42:47:30:17:48 0/0:0:0:0:0:40:0%:74:1E0:40:40:26:14:40 0/0:0:0:0:0:38:0%:70:1E0:39:38:24:14:39 MTB_anc 2172157 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1920_Rv1920|gene1957|transcript|Transcript_gene1957|Coding|1/1|c.535G>A|p.Gly179Ser|535/864|535/864|179/287||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2172157G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2172157G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:51:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:53:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:52:35:17:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:53:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:51:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:69:27:42:69:100%:99:4.233E-41:0:0:0:0:69 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:38:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:52 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:61:31:30:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 2177073 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv1924c_Rv1924c-fadD31_Rv1925|gene1961-gene1962|intergenic_region|gene1961-gene1962|||n.2177073C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:23:16:40:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:61:27:34:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:52:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:60:25:35:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:22:8:14:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:61:35:26:61:100%:99:2.609E-36:0:0:0:0:61 1/1:47:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:24:5:19:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:32:16:16:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:24:5:19:25:96%:99:3.101E-14:0:0:0:0:26 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:75:40:35:75:100%:99:1.0773E-44:0:0:0:0:77 1/1:41:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:63 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:47:24:23:48:97.92%:99:6.1512E-28:0:0:0:0:49 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 2179927 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv1927_Rv1927|gene1964|transcript|Transcript_gene1964|Coding|1/1|c.255C>T|p.Leu85Leu|255/774|255/774|85/257||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2179927C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2179927C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:70:35:35:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:29:17:12:30:96.67%:99:2.6212E-16:36:1:0:1:31 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:20:13:7:21:95.24%:99:4.0873E-11:38:1:1:0:22 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:51:20:31:52:98.08%:99:3.3479E-29:60:1:1:0:52 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:25:10:15:26:96.15%:99:5.4444E-14:39:1:1:0:26 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:45:21:24:46:97.83%:99:1.1441E-25:35:1:0:1:46 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 2180796 . CCGCCTTGGCCTTGTTTGACCAT C . PASS AC=197;AF=0.657;AN=300;ANN=C|frameshift_variant|HIGH|Rv1928c_Rv1928c|gene1965|transcript|Transcript_gene1965|Coding|1/1|c.400_421delATGGTCAAACAAGGCCAAGGCG|p.Met134fs|421/768|400/768|134/255||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2180797_2180818delCGCCTTGGCCTTGTTTGACCAT||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2180797_2180818delCGCCTTGGCCTTGTTTGACCAT||||||;LOF=(Rv1928c_Rv1928c|gene1965|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:35:21:14:38:92.11%:99:1.5466E-18:43:3:2:1:38 1/1:51:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:48:44:29:15:49:89.8%:99:1.2413E-22:36:5:3:2:49 1/1:49:30:19:11:32:93.75%:99:3.0612E-16:33:2:1:1:33 1/1:46:27:15:12:28:93.1%:99:1.5465E-14:46:2:1:1:30 1/1:44:25:14:11:27:92.59%:99:2.0853E-13:52:2:1:1:27 0/1:46:33:15:18:37:89.19%:99:5.7997E-17:36:4:2:2:37 0/1:42:22:9:13:27:78.57%:97:1.7583E-10:48:6:4:2:29 0/1:47:30:19:11:33:88.24%:99:9.89E-16:42:3:3:0:33 1/1:50:28:16:12:30:93.33%:99:4.194E-15:60:2:1:1:30 1/1:50:36:16:20:37:94.74%:99:1.1316E-19:37:2:2:0:39 1/1:43:46:25:21:49:93.88%:99:8.6743E-25:36:3:1:2:49 1/1:56:17:10:7:18:94.44%:86:2.0936E-9:35:1:0:1:18 0/1:44:40:20:20:48:83.33%:99:2.2074E-19:35:8:4:4:48 0/1:47:24:13:11:27:88.89%:99:2.0853E-12:37:3:1:2:27 0/1:47:41:26:15:47:85.42%:99:3.1535E-20:42:7:4:3:48 0/1:48:20:11:9:23:86.96%:95:3.1579E-10:43:3:1:2:24 1/1:48:18:9:9:20:90%:87:1.6758E-9:31:2:1:1:20 1/1:46:20:10:10:22:90.91%:98:1.3117E-10:49:2:1:1:22 1/1:48:22:12:10:22:95.65%:99:2.9149E-12:33:1:0:1:23 0/1:44:23:11:12:25:88.46%:99:7.3681E-12:34:3:1:2:26 0/1:45:58:32:26:65:87.88%:99:3.9936E-29:41:8:4:4:68 1/1:51:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:40:21:19:43:93.02%:99:2.287E-21:43:3:2:1:43 0/1:44:23:11:12:26:88.46%:99:7.3681E-12:33:3:2:1:26 0/1:42:19:10:9:23:82.61%:86:2.1316E-9:42:4:1:3:23 0/1:44:22:8:14:25:84.62%:99:5.5261E-11:34:4:0:4:26 0/1:48:14:9:5:18:77.78%:60:8.0605E-7:47:4:2:2:18 0/1:46:10:7:3:16:62.5%:39:1.2413E-4:39:6:5:1:17 0/1:43:26:16:10:30:86.67%:99:3.9214E-13:41:4:2:2:30 1/1:44:22:15:7:23:91.67%:99:1.0078E-11:33:2:1:1:24 0/1:46:18:12:6:22:81.82%:81:7.1052E-9:46:4:2:2:22 0/1:49:25:11:14:29:86.21%:99:1.3609E-12:44:4:4:0:29 1/1:47:18:7:11:18:94.74%:92:5.6585E-10:34:1:0:1:19 0/1:47:33:16:17:36:84.62%:99:1.3966E-16:41:5:4:1:38 0/1:44:29:15:14:33:82.86%:99:2.0235E-14:39:5:1:4:34 0/1:45:24:13:11:33:75%:99:4.1964E-11:36:8:4:4:33 0/1:48:53:30:23:59:88.33%:99:9.0012E-27:36:7:3:4:60 0/1:47:37:20:17:42:88.1%:99:9.1365E-19:35:5:3:2:43 1/1:46:35:18:17:38:92.11%:99:1.5466E-18:43:3:3:0:39 1/1:43:21:9:12:23:91.3%:99:3.6437E-11:31:2:2:0:23 1/1:44:37:17:20:39:94.87%:99:3.0128E-20:36:2:1:1:39 0/1:51:18:13:5:22:81.82%:81:7.1052E-9:48:4:2:2:22 0/1:47:23:8:15:28:82.14%:99:3.103E-11:33:5:3:2:28 1/1:47:27:16:11:30:90%:99:4.6134E-14:34:3:1:2:31 1/1:49:30:20:10:33:90.91%:99:9.89E-16:36:3:1:2:33 0/1:44:19:10:9:22:86.36%:89:1.0931E-9:37:3:2:1:22 0/1:44:25:14:11:27:86.21%:99:5.8768E-13:45:3:2:1:28 0/1:45:29:15:14:32:85.29%:99:9.1482E-15:43:4:0:4:33 0/1:48:42:20:22:48:87.5%:99:4.0135E-21:43:6:3:3:48 0/1:49:15:6:9:18:83.33%:68:1.4655E-7:45:3:2:1:18 0/1:46:23:11:12:28:82.14%:99:3.103E-11:41:5:5:0:29 1/1:51:25:7:18:26:96.15%:99:5.4444E-14:32:1:1:0:26 0/1:50:22:13:9:26:84.62%:99:5.5261E-11:49:4:2:2:26 1/1:48:21:8:13:22:95.45%:99:1.0931E-11:34:1:0:1:22 0/1:44:28:12:16:31:87.5%:99:1.2857E-14:38:3:1:2:31 0/1:43:25:18:7:29:86.21%:99:1.3609E-12:42:4:1:3:29 0/1:47:15:7:8:19:78.95%:68:1.4655E-7:44:3:1:2:19 1/1:43:31:18:13:34:91.18%:99:2.7308E-16:36:3:1:2:35 0/1:49:33:20:13:37:89.19%:99:5.7997E-17:48:4:3:1:37 0/1:45:25:14:11:30:83.33%:99:2.745E-12:40:5:1:4:32 0/1:45:26:14:12:35:74.29%:99:6.3192E-12:38:9:2:7:35 0/1:44:31:15:16:36:86.11%:99:1.6935E-15:41:5:1:4:36 0/1:51:28:11:17:34:82.35%:99:1.349E-13:37:6:3:3:34 0/1:51:33:19:14:38:86.84%:99:1.3966E-16:41:5:3:2:38 0/1:45:39:23:16:46:84.78%:99:3.7523E-19:42:7:5:2:46 0/1:44:17:6:11:20:85%:78:1.2848E-8:36:3:2:1:20 1/1:45:29:20:9:31:93.55%:99:1.1344E-15:46:2:1:1:31 1/1:47:10:4:6:9:90.91%:47:1.7011E-5:36:1:0:1:11 0/1:47:24:12:12:27:88.89%:99:2.0853E-12:45:3:1:2:27 1/1:48:27:12:15:28:96.43%:99:3.7915E-15:32:1:0:1:28 0/1:52:33:15:18:38:86.84%:99:1.3966E-16:55:5:3:2:38 1/1:49:20:8:12:21:95.24%:99:4.0873E-11:60:1:1:0:21 0/1:49:30:17:13:34:88.24%:99:2.5943E-15:41:4:3:1:34 1/1:45:36:21:15:38:92.31%:99:4.2179E-19:38:3:0:3:39 0/1:45:22:8:14:27:81.48%:99:1.0343E-10:37:5:2:3:27 0/1:46:23:11:12:31:74.19%:98:1.3219E-10:45:8:3:5:31 0/1:54:35:16:19:41:85.37%:99:2.5278E-17:40:6:3:3:41 0/1:46:20:10:10:22:86.96%:95:3.1579E-10:45:3:3:0:23 0/1:40:20:11:9:22:83.33%:91:6.3493E-10:34:4:1:3:24 0/1:45:24:14:10:26:85.71%:99:2.0853E-12:45:3:2:1:27 0/1:47:34:20:14:37:89.47%:99:1.6239E-17:40:4:3:1:38 0/1:48:23:10:13:30:76.67%:99:8.7055E-11:43:7:1:6:30 1/1:47:24:11:13:26:92.31%:99:7.6222E-13:38:2:0:2:26 0/1:44:16:6:10:20:76.19%:69:1.2221E-7:41:5:4:1:22 1/1:42:29:16:13:32:90.62%:99:3.5714E-15:31:3:2:1:32 1/1:44:30:10:20:30:96.77%:99:6.8754E-17:38:1:1:0:31 1/1:47:25:10:15:27:92.59%:99:2.0853E-13:49:2:1:1:27 0/1:45:30:14:16:34:88.24%:99:2.5943E-15:37:4:2:2:34 1/1:51:34:20:14:37:91.89%:99:5.6582E-18:60:3:3:0:37 1/1:47:30:9:21:33:90.91%:99:9.89E-16:37:3:1:2:33 0/1:53:19:13:6:24:79.17%:84:3.6826E-9:39:5:3:2:24 0/1:45:38:21:17:42:88.37%:99:2.5797E-19:39:5:3:2:43 0/1:44:23:12:11:26:85.19%:99:1.6161E-11:43:4:2:2:27 0/1:44:50:28:22:58:83.33%:99:4.106E-24:38:10:6:4:60 0/1:46:29:23:6:34:82.86%:99:4.008E-14:37:6:3:3:35 0/1:48:27:13:14:31:87.1%:99:1.125E-13:36:4:0:4:31 1/1:43:27:13:14:29:90%:99:4.6134E-14:35:3:1:2:30 0/1:40:15:12:3:18:78.95%:66:2.5053E-7:35:4:1:3:20 0/1:45:28:14:14:32:87.5%:99:3.2142E-14:34:4:2:2:32 0/1:43:24:14:10:27:88.89%:99:2.0853E-12:33:3:1:2:27 0/1:42:33:16:17:39:84.62%:99:2.9926E-16:45:6:2:4:39 0/1:45:31:18:13:36:86.11%:99:1.6935E-15:36:5:1:4:36 0/1:42:25:11:14:30:83.33%:99:2.745E-12:44:5:2:3:30 0/1:49:19:12:7:22:86.36%:89:1.0931E-9:36:3:3:0:22 0/1:47:27:12:15:32:84.38%:99:2.3785E-13:39:5:4:1:32 1/1:48:22:9:13:24:91.67%:99:1.0078E-11:38:2:0:2:24 0/1:50:27:11:16:31:87.1%:99:1.125E-13:37:4:3:1:31 0/1:44:31:12:19:37:83.78%:99:3.4914E-15:43:6:3:3:37 0/1:45:21:9:12:25:84%:97:1.8789E-10:42:4:2:2:25 0/1:45:27:13:14:32:81.82%:99:4.5192E-13:42:6:2:4:33 0/1:41:13:8:5:16:81.25%:57:1.6121E-6:36:3:1:2:16 0/1:43:25:14:11:29:83.33%:99:2.745E-12:34:5:3:2:30 0/1:47:36:18:18:42:85.71%:99:7.3092E-18:40:6:2:4:43 1/1:44:29:16:13:27:100%:99:3.3259E-17:0:0:0:0:31 0/1:42:47:23:24:54:85.45%:99:3.9308E-23:32:8:6:2:55 0/1:41:43:29:14:47:89.58%:99:4.4594E-22:33:5:3:2:48 0/1:46:39:17:22:47:82.98%:99:7.4895E-19:35:8:4:4:47 0/1:42:27:12:15:29:87.1%:99:1.125E-13:35:4:2:2:31 0/1:41:38:20:18:43:88.37%:99:2.5797E-19:36:5:2:3:43 0/1:44:44:21:23:51:84.62%:99:1.6162E-21:41:8:4:4:52 1/1:43:32:19:13:34:94.12%:99:2.2142E-17:33:2:1:1:34 0/1:44:17:9:8:22:77.27%:74:3.8368E-8:45:5:4:1:23 1/1:43:45:25:20:49:91.84%:99:1.1493E-23:34:4:1:3:50 0/1:46:35:22:13:42:83.33%:99:5.1164E-17:36:7:2:5:43 0/1:41:36:19:17:44:81.82%:99:2.867E-17:33:8:5:3:46 1/1:39:33:14:19:35:91.67%:99:2.0653E-17:35:3:2:1:36 0/1:43:39:21:18:46:84.78%:99:3.7523E-19:35:7:3:4:47 1/1:43:30:17:13:33:90.91%:99:9.89E-16:35:3:1:2:33 1/1:38:36:19:17:38:90%:99:1.2627E-18:37:4:2:2:40 0/1:42:29:13:16:34:85.29%:99:2.0235E-14:34:5:2:3:34 0/1:41:25:15:10:31:80.65%:99:4.9949E-12:37:6:3:3:31 0/1:40:40:20:20:43:88.89%:99:2.0407E-20:35:5:1:4:46 0/1:41:43:21:22:49:87.76%:99:1.1378E-21:38:6:3:3:49 0/1:41:29:12:17:35:80.56%:99:7.2821E-14:36:7:1:6:37 0/1:42:34:19:15:38:82.93%:99:8.7127E-17:38:6:5:1:40 0/1:40:48:29:19:58:82.76%:99:4.7344E-23:39:10:4:6:58 1/1:48:37:15:22:39:92.5%:99:1.1479E-19:35:3:1:2:40 0/1:44:33:18:15:41:78.57%:99:1.8121E-15:38:9:5:4:42 0/1:41:40:20:20:45:88.89%:99:2.0407E-20:42:5:2:3:45 0/1:43:30:14:16:36:83.33%:99:1.1855E-14:43:6:3:3:36 0/1:43:24:11:13:29:80%:99:1.647E-11:34:6:3:3:30 0/1:43:29:12:17:33:82.86%:99:4.008E-14:35:6:3:3:35 0/1:46:32:14:18:37:86.49%:99:4.8717E-16:36:5:2:3:37 0/1:39:33:13:20:38:82.5%:99:5.85E-16:38:7:4:3:41 1/1:46:28:15:13:29:93.33%:99:4.194E-15:36:2:2:0:30 1/1:45:26:13:13:27:96.3%:99:1.4382E-14:38:1:1:0:27 1/1:44:42:22:20:46:91.3%:99:5.6062E-22:36:4:1:3:46 0/1:41:52:26:26:60:83.87%:99:1.6967E-25:37:9:5:4:61 0/1:45:37:19:18:45:80.43%:99:8.5365E-18:38:8:1:7:45 MTB_anc 2187296 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|echA13_Rv1935c-Rv1936_Rv1936|gene1972-gene1973|intergenic_region|gene1972-gene1973|||n.2187296G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:52:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:18:6:12:19:100%:99:1.1019E-10:0:0:0:0:20 1/1:50:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:31:14:17:32:96.88%:99:1.8007E-17:31:1:1:0:33 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:32:18:14:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:63:34:29:63:100%:99:1.657E-37:0:0:0:0:63 1/1:53:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:22:13:9:23:95.65%:99:2.9149E-12:38:1:1:0:23 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:48:32:16:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:68:38:30:68:100%:99:1.6809E-40:0:0:0:0:70 1/1:45:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:55:36:19:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:49:34:15:50:98%:99:3.925E-29:0:0:0:0:51 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:61:34:27:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 2189692 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv1937_Rv1937|gene1974|transcript|Transcript_gene1974|Coding|1/1|c.1197C>T|p.Arg399Arg|1197/2520|1197/2520|399/839||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2189692C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2189692C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:25:12:13:26:96.15%:99:5.4444E-14:38:1:1:0:26 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:28:15:13:29:96.55%:99:9.9776E-16:38:1:1:0:30 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:49:15:34:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:31:6:25:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:39:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:41:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:33:15:18:34:97.06%:99:1.2301E-18:38:1:0:1:35 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:13:16:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 MTB_anc 2196715 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv1945_Rv1945|gene1982|transcript|Transcript_gene1982|Coding|1/1|c.727G>C|p.Val243Leu|727/1365|727/1365|243/454||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2196715G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2196715G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:0:0:0:0:17:0%:33:1E0:50:17:11:6:18 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:42 0/0:33:1:0:1:22:4.55%:31:5E-1:46:21:12:9:22 0/0:0:0:0:0:12:0%:21:1E0:46:12:6:6:12 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:21 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:13:0%:25:1E0:49:13:8:5:13 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:24 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:0:0:0:0:48:0%:89:1E0:45:48:29:19:48 0/0:0:0:0:0:16:0%:29:1E0:52:16:11:5:17 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:51 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:11:25:36 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:12:0%:21:1E0:41:12:9:3:12 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:17:0%:33:1E0:46:17:6:11:17 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:27:14:41 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:32 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:28 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:25 0/0:36:1:1:0:39:2.56%:62:5E-1:42:38:19:19:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:24 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:17 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:24:0%:44:1E0:50:24:16:8:24 0/0:0:0:0:0:12:0%:21:1E0:45:12:5:7:12 0/0:0:0:0:0:39:0%:74:1E0:49:39:21:18:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:19 0/0:0:0:0:0:28:0%:51:1E0:39:28:9:19:29 0/0:38:1:1:0:19:5.26%:28:5E-1:44:18:6:12:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:22:10:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/1:43:31:17:14:71:43.66%:99:6.8178E-12:43:40:18:22:72 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:18:9:27 0/0:0:0:0:0:16:0%:29:1E0:48:16:11:5:17 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:31 0/0:0:0:0:0:16:0%:29:1E0:48:16:9:7:16 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:47 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:25 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:18 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:27 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:17 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:18:0%:32:1E0:35:18:5:13:18 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:46 0/0:0:0:0:0:46:0%:85:1E0:41:46:18:28:47 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:33:0%:63:1E0:36:33:12:21:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:36 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:36 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:26 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:40 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:34 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:16 0/0:0:0:0:0:23:0%:44:1E0:41:23:6:17:25 0/0:0:0:0:0:57:0%:99:1E0:39:57:26:31:57 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:33 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:0:0:0:0:29:0%:55:1E0:46:29:9:20:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:41 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:23:11:34 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 MTB_anc 2196964 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv1945_Rv1945|gene1982|transcript|Transcript_gene1982|Coding|1/1|c.976A>C|p.Asn326His|976/1365|976/1365|326/454||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2196964A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2196964A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:44:55:26:29:55 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:20 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:43 0/0:0:0:0:0:34:0%:62:1E0:49:34:10:24:35 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:19 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:24 0/0:0:0:0:0:32:0%:59:1E0:49:32:9:23:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:37 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:24 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:44 0/0:0:0:0:0:56:0%:99:1E0:45:56:22:34:56 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:49:0%:93:1E0:43:49:26:23:49 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:17:0%:33:1E0:47:17:8:9:18 0/0:0:0:0:0:42:0%:77:1E0:51:42:23:19:42 0/0:0:0:0:0:26:0%:47:1E0:44:26:8:18:26 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:48 0/0:0:0:0:0:25:0%:48:1E0:55:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:23:0%:44:1E0:49:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:29 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:23 0/0:0:0:0:0:37:0%:70:1E0:49:37:21:16:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:48:35:20:15:35 0/0:60:1:0:1:24:4.17%:34:5E-1:42:23:11:12:25 0/0:38:1:0:1:37:2.7%:59:5E-1:41:36:20:16:37 0/0:0:0:0:0:69:0%:99:1E0:48:69:33:36:69 0/0:0:0:0:0:50:0%:92:1E0:51:50:18:32:51 0/0:0:0:0:0:42:0%:77:1E0:46:42:25:17:43 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:38 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:42 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:30:1:1:0:27:3.7%:41:5E-1:44:26:10:16:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:8:20:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:38:1:1:0:44:2.27%:69:5E-1:46:43:21:22:45 0/0:0:0:0:0:41:0%:78:1E0:48:41:20:21:41 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:38:1:1:0:28:3.57%:41:5E-1:45:27:13:14:28 0/0:0:0:0:0:29:0%:55:1E0:48:29:10:19:29 0/0:0:0:0:0:22:0%:40:1E0:39:22:8:14:22 0/0:36:1:0:1:45:2.22%:73:5E-1:44:44:20:24:47 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:28 0/0:0:0:0:0:50:0%:92:1E0:47:50:18:32:51 0/0:0:0:0:0:62:0%:99:1E0:46:61:33:28:63 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:43 0/0:0:0:0:0:23:0%:44:1E0:50:23:10:13:23 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:55:20:6:14:20 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:37 0/0:38:1:0:1:32:3.12%:48:5E-1:44:31:19:12:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:32:1:1:0:35:2.86%:55:5E-1:51:34:15:19:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:36 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/1:43:24:14:10:54:44.44%:86:2.1774E-9:42:30:10:20:54 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:20:0%:36:1E0:50:20:11:9:20 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:44 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:18:0%:32:1E0:50:18:8:10:18 0/0:0:0:0:0:54:0%:99:1E0:43:54:23:31:54 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:53:0%:99:1E0:45:53:24:29:54 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:38 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:42:0%:77:1E0:45:42:15:27:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:52 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:23 0/0:0:0:0:0:62:0%:99:1E0:42:62:26:36:62 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:54 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:39 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:59:0%:99:1E0:41:59:28:31:61 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:43 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:41 0/0:0:0:0:0:54:0%:99:1E0:38:54:26:28:55 0/0:0:0:0:0:53:0%:99:1E0:43:53:23:30:53 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:39 0/0:0:0:0:0:46:0%:85:1E0:39:46:17:29:47 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:46 0/0:0:0:0:0:49:0%:93:1E0:38:49:27:22:50 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:67:0%:99:1E0:41:67:35:32:67 0/0:0:0:0:0:52:0%:96:1E0:42:52:22:30:52 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:33:1:0:1:36:2.78%:55:5E-1:43:35:16:19:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:54:0%:99:1E0:41:54:30:24:54 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:52:0%:96:1E0:39:52:22:30:52 0/0:38:1:0:1:33:3.03%:52:5E-1:44:32:16:16:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:49:0%:93:1E0:45:49:30:19:49 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 MTB_anc 2196969 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|synonymous_variant|LOW|Rv1945_Rv1945|gene1982|transcript|Transcript_gene1982|Coding|1/1|c.981G>C|p.Ala327Ala|981/1365|981/1365|327/454||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2196969G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2196969G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:44:53:25:28:55 0/0:0:0:0:0:18:0%:32:1E0:50:18:11:7:19 0/0:0:0:0:0:41:0%:78:1E0:48:41:20:21:41 0/0:0:0:0:0:34:0%:62:1E0:49:34:10:24:35 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:50:33:9:24:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:44 0/0:0:0:0:0:57:0%:99:1E0:45:57:23:34:57 0/0:0:0:0:0:19:0%:37:1E0:52:19:9:10:19 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:51 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:18 0/0:0:0:0:0:40:0%:74:1E0:51:40:21:19:40 0/0:0:0:0:0:23:0%:44:1E0:44:23:7:16:24 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:46 0/0:0:0:0:0:25:0%:48:1E0:55:25:11:14:25 0/0:60:1:1:0:33:3.03%:52:5E-1:47:32:17:15:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:51:35:20:15:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:37:1:0:1:33:3.03%:52:5E-1:45:32:18:14:33 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:35 0/0:60:1:0:1:22:4.55%:31:5E-1:42:21:11:10:23 0/0:38:1:0:1:37:2.7%:59:5E-1:42:36:20:16:38 0/0:0:0:0:0:65:0%:99:1E0:49:65:31:34:66 0/0:0:0:0:0:49:0%:93:1E0:50:49:18:31:50 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:32:1:1:0:27:3.7%:41:5E-1:45:26:10:16:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:7:21:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:38:1:1:0:45:2.22%:73:5E-1:45:44:22:22:45 0/0:0:0:0:0:40:0%:74:1E0:48:40:20:20:40 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:33 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:36:1:1:0:28:3.57%:41:5E-1:46:27:13:14:28 0/0:52:1:0:1:29:3.45%:45:5E-1:49:28:9:19:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:38:1:0:1:46:2.17%:73:5E-1:44:45:20:25:47 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:49:0%:93:1E0:47:49:18:31:49 0/0:0:0:0:0:62:0%:99:1E0:47:62:34:28:63 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:43:0%:82:1E0:46:43:20:23:43 0/0:0:0:0:0:23:0%:44:1E0:51:23:10:13:23 0/0:37:1:0:1:20:5%:27:5E-1:51:19:7:12:20 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:55:20:6:14:20 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 0/0:0:0:0:0:36:0%:66:1E0:47:36:12:24:36 0/0:38:1:0:1:31:3.23%:48:5E-1:45:30:19:11:31 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:21 0/0:0:0:0:0:33:0%:63:1E0:50:33:14:19:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/1:44:23:13:10:53:43.4%:82:5.5473E-9:42:30:10:20:53 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:20 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:43 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:48 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:19 0/0:0:0:0:0:53:0%:99:1E0:44:53:23:30:54 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:53:0%:99:1E0:44:53:23:30:55 0/0:0:0:0:0:34:0%:62:1E0:47:34:12:22:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:26 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:25 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:26 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:43:0%:82:1E0:45:43:15:28:43 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:32 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:53 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:63:0%:99:1E0:42:63:26:37:63 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:54 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:23 0/0:0:0:0:0:61:0%:99:1E0:40:61:30:31:62 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:44 0/0:0:0:0:0:40:0%:74:1E0:39:40:15:25:41 0/0:0:0:0:0:54:0%:99:1E0:38:54:27:27:55 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:54 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:44:0%:81:1E0:39:44:16:28:47 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:45 0/0:0:0:0:0:49:0%:93:1E0:39:49:28:21:51 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:66:0%:99:1E0:41:66:34:32:67 0/0:0:0:0:0:52:0%:96:1E0:42:52:22:30:52 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:54:0%:99:1E0:41:54:30:24:54 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:37 0/0:0:0:0:0:50:0%:92:1E0:40:50:21:29:51 0/0:38:1:0:1:33:3.03%:52:5E-1:45:32:16:16:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:49:0%:93:1E0:45:49:30:19:49 0/0:0:0:0:0:41:0%:78:1E0:46:41:26:15:41 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 MTB_anc 2196970 . C A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv1945_Rv1945|gene1982|transcript|Transcript_gene1982|Coding|1/1|c.982C>A|p.His328Asn|982/1365|982/1365|328/454||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2196970C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2196970C>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:54 0/0:0:0:0:0:19:0%:37:1E0:49:19:12:7:19 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:41 0/0:0:0:0:0:35:0%:67:1E0:47:35:10:25:35 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:23 0/0:0:0:0:0:34:0%:62:1E0:49:34:10:24:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:31 0/0:0:0:0:0:38:0%:70:1E0:46:38:21:17:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:57:0%:99:1E0:45:57:23:34:57 0/0:0:0:0:0:19:0%:37:1E0:52:19:9:10:19 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:50 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:39:0%:74:1E0:51:39:21:18:40 0/0:0:0:0:0:25:0%:48:1E0:42:25:8:17:25 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:46 0/0:0:0:0:0:25:0%:48:1E0:54:25:11:14:25 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:33 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:36:0%:66:1E0:49:36:21:15:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:60:1:0:1:36:2.78%:55:5E-1:47:35:21:14:36 0/0:60:1:0:1:23:4.35%:34:5E-1:40:22:12:10:23 0/0:38:1:0:1:38:2.63%:58:5E-1:42:37:21:16:38 0/0:0:0:0:0:66:0%:99:1E0:48:66:32:34:67 0/0:0:0:0:0:48:0%:89:1E0:51:48:18:30:50 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:41 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:32:1:1:0:27:3.7%:41:5E-1:45:26:10:16:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:8:21:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:38:1:1:0:45:2.22%:73:5E-1:45:44:22:22:45 0/0:0:0:0:0:39:0%:74:1E0:48:39:20:19:40 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:33 0/0:0:0:0:0:23:0%:44:1E0:48:23:15:8:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:21 0/0:38:1:1:0:28:3.57%:41:5E-1:45:27:13:14:28 0/0:0:0:0:0:30:0%:55:1E0:49:30:10:20:30 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:20 0/0:38:1:0:1:46:2.17%:73:5E-1:44:45:19:26:46 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:49:0%:93:1E0:47:49:18:31:49 0/0:0:0:0:0:62:0%:99:1E0:46:62:33:29:63 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:43:0%:82:1E0:46:43:20:23:43 0/0:0:0:0:0:23:0%:44:1E0:51:23:10:13:23 0/0:0:0:0:0:20:0%:36:1E0:50:20:7:13:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:19:0%:37:1E0:54:19:5:14:19 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:35 0/0:0:0:0:0:36:0%:66:1E0:46:36:12:24:36 0/0:38:1:0:1:31:3.23%:48:5E-1:44:30:19:11:31 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:49:33:14:19:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/1:44:23:13:10:53:43.4%:82:5.5473E-9:41:30:10:20:53 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:33:1:0:1:23:4.35%:34:5E-1:46:22:14:8:24 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:25 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:48 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:19 0/0:0:0:0:0:53:0%:99:1E0:43:53:23:30:54 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:54:0%:99:1E0:44:54:25:29:55 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:15:28:43 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:54 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:36 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:23 0/0:0:0:0:0:64:0%:99:1E0:41:64:27:37:64 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:54 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 0/0:0:0:0:0:58:0%:99:1E0:40:58:28:30:62 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:44 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:41 0/0:0:0:0:0:46:0%:85:1E0:40:46:26:20:54 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:54 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:38 0/0:0:0:0:0:46:0%:85:1E0:39:46:17:29:47 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:45 0/0:0:0:0:0:49:0%:93:1E0:38:49:26:23:51 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:66:0%:99:1E0:41:66:34:32:67 0/0:0:0:0:0:51:0%:97:1E0:41:51:22:29:52 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:46 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:54:0%:99:1E0:41:54:30:24:54 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:51:0%:97:1E0:39:51:21:30:51 0/0:38:1:0:1:32:3.12%:48:5E-1:45:31:15:16:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:48:0%:89:1E0:45:48:29:19:49 0/0:0:0:0:0:40:0%:74:1E0:46:40:25:15:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:40 MTB_anc 2197176 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv1945_Rv1945|gene1982|transcript|Transcript_gene1982|Coding|1/1|c.1188A>G|p.Thr396Thr|1188/1365|1188/1365|396/454||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2197176A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2197176A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:31:18:13:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:46:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:44:29:15:45:97.78%:99:3.8097E-26:0:0:0:0:46 1/1:49:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:64:40:24:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:32:16:16:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:52:12:40:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:62:24:38:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:59:38:21:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 2198427 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv1947_Rv1947-Rv1948c_Rv1948c|gene1984-gene1985|intergenic_region|gene1984-gene1985|||n.2198427G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:61:24:37:61:100%:99:2.609E-36:0:0:0:0:62 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:10:30:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:35:7:28:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:52:16:36:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:39:8:31:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:46:13:33:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:49:15:34:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:59:21:38:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:37:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:34:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:55:19:36:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:39:48:15:33:49:97.96%:99:1.9625E-27:32:1:1:0:49 1/1:39:30:8:22:31:96.77%:99:6.8754E-17:34:1:1:0:31 MTB_anc 2199052 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv1948c_Rv1948c|gene1985|transcript|Transcript_gene1985|Coding|1/1|c.13C>G|p.Arg5Gly|13/351|13/351|5/116||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2199052G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2199052G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:39:17:22:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:23:17:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:51:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:68:40:28:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:15:16:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:46:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:33:18:15:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:40:23:17:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:43:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:48:31:17:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:21:11:10:22:95.45%:99:1.8578E-12:0:0:0:0:23 1/1:40:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:50:36:14:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 2199416 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2199416G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2199416G>A||||||,A|intergenic_region|MODIFIER|Rv1948c_Rv1948c-Rv1950c_Rv1950c|gene1985-gene1986|intergenic_region|gene1985-gene1986|||n.2199416G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:13:16:30:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:61:28:33:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:60:28:32:60:100%:99:1.035E-35:0:0:0:0:61 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:60:33:27:60:100%:99:1.035E-35:0:0:0:0:60 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:38:6:32:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 MTB_anc 2201691 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv1954c_Rv1954c|gene1990|transcript|Transcript_gene1990|Coding|1/1|c.54G>A|p.Ala18Ala|54/522|54/522|18/173||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2201691C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2201691C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:14:5:9:15:93.33%:69:1.0315E-7:60:1:1:0:15 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:29:14:15:30:96.67%:99:2.6212E-16:32:1:0:1:31 1/1:40:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:40:17:23:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:48:10:38:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:54:18:36:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:37:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:38:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:37:47:12:35:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 MTB_anc 2202833 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv1957_Rv1957|gene1993|transcript|Transcript_gene1993|Coding|1/1|c.250G>A|p.Asp84Asn|250/546|250/546|84/181||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2202833G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2202833G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:52:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:40:20:20:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:52:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:67:24:43:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:53:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:52:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:54:18:36:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:23:10:13:25:92%:99:2.7767E-12:38:2:2:0:25 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:63:36:27:63:100%:99:1.657E-37:0:0:0:0:63 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 2207591 . T TC . PASS AC=300;AF=1.00;AN=300;ANN=TC|intergenic_region|MODIFIER|mce3R_Rv1963c-yrbE3A_Rv1964|gene2000-gene2001|intergenic_region|gene2000-gene2001|||n.2207591_2207592insC||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:49:17:32:50:98%:99:5.0549E-28:33:1:0:1:50 1/1:46:30:12:18:31:93.75%:99:3.0612E-16:33:2:2:0:32 1/1:41:37:18:19:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:16:10:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:41:22:19:39:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:37:14:23:37:97.37%:99:5.6582E-21:36:1:0:1:38 1/1:49:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:52:31:16:15:34:91.18%:99:2.7308E-16:33:3:2:1:34 1/1:48:26:11:15:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:44:47:27:20:47:97.92%:99:7.6145E-27:30:1:1:0:48 1/1:52:27:13:14:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:14:19:33:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:41:41:21:20:39:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:30:17:13:27:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:32:16:16:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:46:38:11:27:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:43:21:22:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:51:24:27:50:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:45:18:27:43:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:32:16:16:32:96.97%:99:4.7095E-18:33:1:0:1:33 1/1:45:24:15:9:24:96%:99:2.0568E-13:32:1:1:0:25 1/1:45:34:16:18:35:94.44%:99:1.5887E-18:44:2:1:1:36 1/1:48:22:8:14:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:16:11:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:16:14:30:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:44:32:16:16:33:96.97%:99:4.7095E-18:32:1:1:0:33 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:17:21:39:97.44%:99:1.4697E-21:33:1:1:0:39 1/1:47:49:25:24:50:98%:99:5.0549E-28:33:1:1:0:50 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:15:12:27:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:45:62:24:38:62:96.88%:99:8.9557E-35:32:2:1:1:64 1/1:45:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:56:33:23:55:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:38:11:27:38:97.44%:99:1.4697E-21:35:1:1:0:39 1/1:45:40:22:18:40:97.56%:99:9.8874E-23:32:1:0:1:41 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:17:15:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:18:21:39:97.5%:99:3.8137E-22:33:1:1:0:40 1/1:44:37:16:21:35:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:57:27:30:57:98.28%:99:9.6072E-33:32:1:0:1:58 1/1:40:48:18:30:49:97.96%:99:1.9625E-27:33:1:0:1:49 1/1:45:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:24:10:14:23:100%:99:3.101E-14:0:0:0:0:24 1/1:42:46:23:23:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:18:6:12:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:53:27:26:54:98.15%:99:2.2126E-30:60:1:1:0:54 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:36:15:21:37:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:29:11:18:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:49:30:19:50:96.08%:99:3.4484E-27:35:2:2:0:51 1/1:42:33:13:20:33:94.29%:99:5.9366E-18:52:2:1:1:35 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:39:18:21:40:97.5%:99:3.8137E-22:60:1:0:1:40 1/1:41:38:19:19:40:92.68%:99:3.1178E-20:33:3:1:2:41 1/1:45:22:11:11:23:95.65%:99:2.9149E-12:33:1:1:0:23 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:38:19:19:36:97.44%:99:1.4697E-21:35:1:1:0:39 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:15:13:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:43:22:21:41:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:9:18:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:10:19:29:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:43:34:16:18:33:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:40:35:18:17:36:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:41:52:26:26:51:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:31:12:19:30:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:47:26:8:18:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:16:17:34:97.06%:99:1.2301E-18:33:1:1:0:34 1/1:50:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:42:21:21:42:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:53:28:25:52:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:30:17:13:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:43:17:26:43:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:42:35:16:19:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:20:14:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:19:19:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:13:16:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:42:17:7:10:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:37:25:12:33:97.37%:99:5.6582E-21:32:1:0:1:38 1/1:46:25:12:13:26:96.15%:99:5.4444E-14:33:1:1:0:26 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:15:5:10:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:47:25:22:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:29:10:19:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:41:34:15:19:35:97.14%:99:3.2089E-19:32:1:0:1:35 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:38:30:8:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:57:26:31:54:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:19:11:30:96.77%:99:6.8754E-17:33:1:1:0:31 1/1:41:30:14:16:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:41:60:23:37:60:98.36%:99:1.6176E-34:35:1:0:1:61 1/1:41:44:28:16:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:29:16:13:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:15:19:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:52:28:24:52:98.11%:99:8.609E-30:33:1:1:0:53 1/1:38:56:29:27:51:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:40:17:23:39:95.24%:99:5.6346E-22:29:2:1:1:42 1/1:36:58:26:32:53:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:40:21:19:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:36:15:21:37:92.31%:99:4.2179E-19:32:3:2:1:40 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:37:42:20:22:38:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:42:26:16:40:97.67%:99:6.6289E-24:32:1:1:0:43 1/1:37:42:24:18:39:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:47:25:22:47:97.92%:99:7.6145E-27:34:1:0:1:48 1/1:39:32:13:19:32:96.97%:99:4.7095E-18:33:1:0:1:33 1/1:41:43:18:25:44:97.73%:99:1.7144E-24:29:1:1:0:44 1/1:38:73:29:44:73:97.33%:99:3.2103E-42:33:1:0:1:75 1/1:41:51:28:23:50:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:51:25:26:49:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:52:26:26:53:98.11%:99:6.3169E-31:0:0:0:0:53 1/1:43:42:22:20:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:31:13:18:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:13:17:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:18:19:36:97.37%:99:5.6582E-21:35:1:1:0:38 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:47:23:24:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:57:28:29:55:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:44:15:29:44:97.78%:99:4.4304E-25:60:1:1:0:45 MTB_anc 2209465 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|mce3A_Rv1966|gene2003|transcript|Transcript_gene2003|Coding|1/1|c.139A>G|p.Thr47Ala|139/1278|139/1278|47/425||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2209465A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2209465A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:51:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:30:12:18:31:96.77%:99:6.8754E-17:38:1:0:1:31 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:50:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:40:9:31:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:50:16:34:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 2212794 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|mce3C_Rv1968|gene2005|transcript|Transcript_gene2005|Coding|1/1|c.1169C>A|p.Pro390His|1169/1233|1169/1233|390/410||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2212794C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2212794C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:31:0%:59:1E0:43:31:23:8:32 0/0:0:0:0:0:9:0%:18:1E0:47:9:6:3:10 0/0:0:0:0:0:43:0%:82:1E0:46:43:28:15:44 0/0:0:0:0:0:11:0%:22:1E0:45:11:3:8:11 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:25 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:19 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:17 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:16 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:17 0/0:0:0:0:0:34:0%:63:1E0:41:33:21:12:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:25:7:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:47:32:22:10:32 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:0:0:0:0:16:0%:29:1E0:51:16:7:9:16 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:19:0%:37:1E0:39:19:13:6:19 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:17 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:24 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 0/0:0:0:0:0:51:0%:97:1E0:45:51:29:22:52 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:35:0%:67:1E0:39:35:24:11:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:34 0/0:0:0:0:0:9:0%:18:1E0:46:9:5:4:9 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 0/0:0:0:0:0:20:0%:36:1E0:51:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:17:0%:33:1E0:40:17:11:6:17 0/0:37:1:0:1:35:2.86%:55:5E-1:42:34:18:16:35 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:34 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:47:0%:89:1E0:45:47:28:19:47 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:11:0%:22:1E0:45:11:2:9:11 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:18:0%:32:1E0:44:18:6:12:18 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:21 0/0:37:1:0:1:30:3.33%:44:5E-1:39:29:14:15:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:24:9:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:27:9:37 0/0:0:0:0:0:13:0%:25:1E0:47:13:4:9:13 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:18:0%:32:1E0:49:18:8:10:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:43:0%:82:1E0:41:43:28:15:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:42 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:7:16:23 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:47 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:29:0%:55:1E0:36:29:9:20:30 0/0:0:0:0:0:13:0%:25:1E0:48:13:7:6:13 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:24:13:39 0/0:0:0:0:0:37:0%:70:1E0:49:37:24:13:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:19:7:26 0/0:0:0:0:0:33:0%:63:1E0:37:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:30 0/0:0:0:0:0:35:0%:67:1E0:37:35:20:15:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:20:0%:37:1E0:40:19:12:7:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:36 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:35 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:31:0%:59:1E0:38:31:11:20:32 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:24 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:20 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:17 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:20 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:46:0%:85:1E0:39:46:22:24:46 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:28 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:38:0%:70:1E0:39:38:25:13:38 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:54:0%:99:1E0:43:54:24:30:56 0/0:0:0:0:0:54:0%:99:1E0:42:54:32:22:56 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 MTB_anc 2215817 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|mce3F_Rv1971|gene2008|transcript|Transcript_gene2008|Coding|1/1|c.561A>C|p.Glu187Asp|561/1314|561/1314|187/437||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2215817A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2215817A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:43:51:29:22:51 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:0:0:0:0:58:0%:99:1E0:45:58:26:32:58 0/0:0:0:0:0:28:0%:51:1E0:51:28:11:17:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:38:0%:70:1E0:49:38:22:16:39 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:21 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:21 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:32 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:22 0/0:0:0:0:0:62:0%:99:1E0:46:62:29:33:62 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:18 0/0:0:0:0:0:53:0%:99:1E0:41:53:27:26:53 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:41:0%:78:1E0:46:41:26:15:43 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:34 0/0:0:0:0:0:53:0%:99:1E0:41:53:32:21:53 0/0:0:0:0:0:30:0%:55:1E0:50:30:12:18:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:21:0%:40:1E0:51:21:14:7:22 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:26:13:39 0/0:0:0:0:0:41:0%:78:1E0:48:41:14:27:41 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:42:0%:77:1E0:48:42:27:15:42 0/0:38:1:1:0:67:1.49%:99:5E-1:45:66:25:41:67 0/0:0:0:0:0:44:0%:81:1E0:46:44:31:13:44 0/0:0:0:0:0:53:0%:99:1E0:48:53:26:27:53 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:39 0/0:0:0:0:0:55:0%:99:1E0:46:55:20:35:55 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:21 0/0:34:1:0:1:20:5%:27:5E-1:46:19:12:7:20 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:43 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:44 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:22:0%:40:1E0:53:22:14:8:22 0/0:0:0:0:0:53:0%:99:1E0:45:53:31:22:53 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:44 0/0:0:0:0:0:48:0%:89:1E0:49:48:24:24:48 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:43 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:48 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:33 0/0:0:0:0:0:46:0%:85:1E0:46:46:30:16:46 0/0:0:0:0:0:16:0%:29:1E0:54:16:10:6:17 0/0:0:0:0:0:17:0%:33:1E0:48:17:4:13:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:50:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:25 0/0:0:0:0:0:38:0%:70:1E0:50:38:20:18:38 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:47 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:32:0%:59:1E0:50:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:49 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:26 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:7:20:27 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:39 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:44:0%:81:1E0:47:44:20:24:44 0/0:0:0:0:0:33:0%:63:1E0:53:33:18:15:33 0/0:0:0:0:0:51:0%:97:1E0:39:51:21:30:52 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:46 0/0:0:0:0:0:23:0%:44:1E0:44:23:16:7:23 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:42 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:20 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:37 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:38 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:33 0/0:0:0:0:0:47:0%:89:1E0:39:47:19:28:47 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:46 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:21 0/0:0:0:0:0:65:0%:99:1E0:41:65:35:30:67 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:51 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:41 0/0:0:0:0:0:47:0%:89:1E0:41:47:28:19:48 0/0:0:0:0:0:43:0%:82:1E0:38:43:16:27:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:42 0/0:0:0:0:0:53:0%:99:1E0:40:53:28:25:54 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:42 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:43 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:43 0/0:38:1:1:0:44:2.27%:69:5E-1:43:43:20:23:46 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:45 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:44 0/0:0:0:0:0:69:0%:99:1E0:39:69:33:36:69 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:47 0/0:0:0:0:0:48:0%:89:1E0:43:48:22:26:50 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:42 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:39:1:1:0:55:1.82%:91:5E-1:43:54:24:30:55 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:49:0%:93:1E0:40:49:26:23:49 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:58:0%:99:1E0:44:58:30:28:58 0/0:0:0:0:0:43:0%:82:1E0:40:43:18:25:44 MTB_anc 2218012 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv1974_Rv1974|gene2011|transcript|Transcript_gene2011|Coding|1/1|c.354G>A|p.Ala118Ala|354/378|354/378|118/125||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2218012G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2218012G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:38:29:9:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:44:33:11:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:36:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:51:35:16:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 2222308 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1979c_Rv1979c|gene2016|transcript|Transcript_gene2016|Coding|1/1|c.857G>A|p.Gly286Asp|857/1446|857/1446|286/481||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2222308C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|bedaquiline_clofazimine|||n.2222308C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2222308C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:51:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:49:21:28:49:100%:99:3.925E-29:0:0:0:0:52 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:69:35:34:69:100%:99:4.233E-41:0:0:0:0:70 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:49:31:18:49:100%:99:3.925E-29:0:0:0:0:52 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:49:22:27:49:100%:99:3.925E-29:0:0:0:0:52 1/1:38:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:57:37:20:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:37:66:37:29:66:100%:99:2.6498E-39:0:0:0:0:72 1/1:47:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:24:9:15:25:96%:99:3.101E-14:0:0:0:0:25 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:45 MTB_anc 2225456 . A T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|vapC36_Rv1982c|gene2019|transcript|Transcript_gene2019|Coding|1/1|c.377T>A|p.Leu126His|377/420|377/420|126/139||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2225456A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2225456A>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:60:34:26:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:41:21:20:42:97.62%:99:2.5612E-23:38:1:1:0:42 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:31:22:9:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:49:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:40:25:15:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:47:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:67:37:30:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:49:34:15:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:52:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:49:31:18:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:36:17:19:37:97.3%:99:2.1762E-20:37:1:1:0:39 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2226534 . G C . PASS AC=68;AF=0.227;AN=300;ANN=C|missense_variant|MODERATE|PE_PGRS35_Rv1983|gene2021|transcript|Transcript_gene2021|Coding|1/1|c.291G>C|p.Gln97His|291/1677|291/1677|97/558||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2226534G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2226534G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:50 0/0:0:0:0:0:23:0%:44:1E0:50:23:9:14:23 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 1/1:45:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:20 0/0:0:0:0:0:39:0%:74:1E0:48:39:22:17:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 1/1:44:27:12:15:28:96.43%:99:3.7915E-15:32:1:0:1:28 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:15:0%:29:1E0:47:15:9:6:15 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:48 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:39:1:1:0:29:3.45%:45:5E-1:43:28:15:13:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:41 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 1/1:46:36:23:13:37:97.3%:99:2.1762E-20:60:1:1:0:37 0/0:0:0:0:0:21:0%:40:1E0:43:21:3:18:22 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:29 0/0:0:0:0:0:20:0%:36:1E0:40:20:18:2:20 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:20 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:44 0/0:0:0:0:0:66:0%:99:1E0:44:66:36:30:66 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:45 0/0:0:0:0:0:56:0%:99:1E0:44:56:33:23:57 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:55:0%:99:1E0:43:55:31:24:55 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:49:0%:93:1E0:41:49:26:23:50 0/0:0:0:0:0:46:0%:85:1E0:40:46:17:29:47 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:36 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:20 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:50 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:44 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:44:16:28:45:97.78%:99:4.4304E-25:39:1:0:1:45 1/1:45:24:10:14:25:96%:99:2.0568E-13:39:1:0:1:25 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 1/1:46:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:52 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:37:1:0:1:38:2.63%:58:5E-1:44:37:18:19:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 1/1:41:51:22:29:52:98.08%:99:3.3479E-29:38:1:1:0:52 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 1/1:41:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:6:14:20 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:42 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:55:0%:99:1E0:39:55:20:35:55 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:60:0%:99:1E0:42:60:34:26:60 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:45 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:12:24:36 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:19 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:34 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:16:0%:29:1E0:39:16:8:8:17 0/0:0:0:0:0:23:0%:44:1E0:39:23:9:14:24 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:45 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:41 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:47:0%:89:1E0:39:47:22:25:48 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:30 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:49:0%:93:1E0:45:49:29:20:51 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:37:0%:70:1E0:40:37:12:25:39 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:33:0%:63:1E0:38:33:12:21:34 0/0:37:1:0:1:44:2.27%:69:5E-1:42:43:19:24:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:32 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:33 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:66:0%:99:1E0:39:66:30:36:67 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:49 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 0/0:0:0:0:0:57:0%:99:1E0:41:57:24:33:57 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 MTB_anc 2228900 . T G . PASS AC=124;AF=0.413;AN=300;ANN=G|missense_variant|MODERATE|RV1984a_RV1984a|gene2023|transcript|Transcript_gene2023|Coding|1/1|c.225T>G|p.Ser75Arg|225/231|225/231|75/76||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:54:17:37:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:56:0%:99:1E0:46:56:19:37:57 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 1/1:48:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:27:0%:52:1E0:54:27:12:15:27 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:38:1:1:0:24:4.17%:34:5E-1:51:23:12:11:24 0/0:0:0:0:0:22:0%:40:1E0:50:22:12:10:22 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:22 1/1:45:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:53:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:26 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:51:29:20:9:30 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:40 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:48:34:14:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:63:34:29:63:100%:99:1.657E-37:0:0:0:0:65 0/0:0:0:0:0:44:0%:81:1E0:48:44:22:22:44 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:22:0%:40:1E0:42:22:16:6:23 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:60:1:0:1:53:1.89%:88:5E-1:44:52:27:25:53 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:42:0%:77:1E0:48:42:23:19:43 1/1:47:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:23:0%:44:1E0:53:23:8:15:23 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:46:0%:85:1E0:49:46:23:23:46 0/0:0:0:0:0:38:0%:70:1E0:48:38:24:14:38 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:48 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:37 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:45:0%:85:1E0:49:45:23:22:45 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 1/1:51:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:40 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:45 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:52:0%:96:1E0:46:52:27:25:52 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:51 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:39 0/0:0:0:0:0:37:0%:70:1E0:49:37:14:23:38 0/0:0:0:0:0:19:0%:37:1E0:46:19:6:13:19 0/0:0:0:0:0:71:0%:99:1E0:44:71:35:36:71 0/0:35:1:1:0:48:2.08%:76:5E-1:43:47:20:27:49 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:45:0%:85:1E0:40:45:19:26:46 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:35 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:24 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:46 0/0:0:0:0:0:58:0%:99:1E0:39:58:28:30:61 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:42 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:40 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:47 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 0/0:0:0:0:0:42:0%:77:1E0:40:42:25:17:44 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:49 1/1:39:61:29:32:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:45 0/0:0:0:0:0:58:0%:99:1E0:44:58:28:30:58 0/0:0:0:0:0:35:0%:67:1E0:44:35:12:23:35 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 0/0:0:0:0:0:45:0%:85:1E0:43:45:14:31:46 1/1:42:61:31:30:61:100%:99:2.609E-36:0:0:0:0:63 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 2229801 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv1985c_Rv1985c|gene2024|transcript|Transcript_gene2024|Coding|1/1|c.102C>G|p.Pro34Pro|102/912|102/912|34/303||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2229801G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.2229801G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:54:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:31:14:17:32:96.88%:99:1.8007E-17:60:1:0:1:33 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:47:22:25:48:97.92%:99:7.6145E-27:60:1:1:0:48 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:53:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:39:16:23:40:97.5%:99:3.8137E-22:31:1:1:0:40 1/1:51:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:70:39:31:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:71:36:35:72:98.61%:99:2.6835E-42:0:0:0:0:72 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:28:22:6:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:48:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:55:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:39:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:59:29:30:60:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:60:27:33:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 2231486 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|clarithromycin|||n.2231486G>A||||||,A|intergenic_region|MODIFIER|Rv1987_Rv1987-erm_37__Rv1988|gene2026-gene2027|intergenic_region|gene2026-gene2027|||n.2231486G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:45:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:53:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:61:34:27:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 MTB_anc 2238861 . GA G . PASS AC=18;AF=0.060;AN=300;ANN=G|frameshift_variant|HIGH|Rv1995_Rv1995|gene2035|transcript|Transcript_gene2035|Coding|1/1|c.727delA|p.Ser243fs|727/768|727/768|243/255||INFO_REALIGN_3_PRIME,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2238862delA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2238862delA||||||;HET=0;LOF=(Rv1995_Rv1995|gene2035|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:13:0%:25:1E0:48:13:6:7:13 0/0:60:1:0:1:58:1.72%:94:5E-1:47:57:36:21:58 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 1/1:46:23:10:13:24:95.83%:99:7.7525E-13:37:1:0:1:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:33:0%:63:1E0:51:33:11:22:33 0/0:32:1:1:0:28:3.57%:41:5E-1:43:27:11:16:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:37 0/0:0:0:0:0:27:0%:52:1E0:51:27:8:19:27 1/1:52:32:12:20:33:96.97%:99:4.7095E-18:60:1:0:1:33 0/0:0:0:0:0:47:0%:89:1E0:45:47:28:19:48 0/0:0:0:0:0:24:0%:44:1E0:49:24:11:13:24 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:49:35:23:12:35 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:21 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 1/1:44:17:7:10:17:94.44%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:44 0/0:0:0:0:0:54:0%:99:1E0:49:54:30:24:54 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:37:1:1:0:25:4%:38:5E-1:47:24:15:9:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:22 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 1/1:44:24:11:13:24:96%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:22:0%:40:1E0:49:22:7:15:23 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:36 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:42:0%:77:1E0:46:42:14:28:43 0/0:0:0:0:0:22:0%:40:1E0:49:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:16:0%:29:1E0:52:16:8:8:17 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:27 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:35:0%:67:1E0:49:35:21:14:36 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:51:31:21:10:31 0/0:38:1:0:1:44:2.27%:69:5E-1:49:43:19:24:44 0/0:0:0:0:0:14:0%:25:1E0:48:14:3:11:14 1/1:48:41:20:21:42:97.62%:99:2.5612E-23:37:1:0:1:42 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:22:0%:40:1E0:41:22:8:14:22 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:45 0/0:37:1:1:0:31:3.23%:48:5E-1:47:30:15:15:32 0/0:60:1:1:0:35:2.86%:55:5E-1:48:34:12:22:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:36:0%:66:1E0:50:36:17:19:36 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:27:0%:52:1E0:40:27:8:19:27 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:49 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:46:0%:85:1E0:42:46:16:30:46 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:37 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:33 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:39 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:17 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:22 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:13:26:39 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:20:15:35 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:42 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:21:0%:40:1E0:42:21:15:6:21 0/0:0:0:0:0:56:0%:99:1E0:42:56:24:32:58 0/0:0:0:0:0:54:0%:99:1E0:42:54:33:21:55 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:54 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:43 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:26:10:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:44 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:44 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:55:0%:99:1E0:40:55:28:27:56 0/0:0:0:0:0:54:0%:99:1E0:42:54:24:30:54 0/0:0:0:0:0:54:0%:99:1E0:44:54:24:30:54 1/1:41:43:19:24:44:97.73%:99:1.7144E-24:32:1:1:0:44 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:14:29:44 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:47:27:20:48:97.92%:99:7.6145E-27:37:1:0:1:48 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:38 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:38 MTB_anc 2238983 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|Rv1995_Rv1995-Rv1996_Rv1996|gene2035-gene2036|intergenic_region|gene2035-gene2036|||n.2238983A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:46:25:21:49:100%:99:2.4343E-27:0:0:0:0:50 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:49:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:60:33:27:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:15:18:34:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:37:19:18:38:97.37%:99:5.6582E-21:60:1:0:1:38 1/1:52:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:46:20:26:47:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:48:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:34:13:21:35:97.14%:99:3.5146E-20:0:0:0:0:36 1/1:38:45:24:21:46:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:40:17:23:41:97.56%:99:9.8874E-23:39:1:0:1:41 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 2239548 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|Rv1996_Rv1996|gene2036|transcript|Transcript_gene2036|Coding|1/1|c.545C>T|p.Ser182Leu|545/954|545/954|182/317||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2239548C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2239548C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:16:0%:29:1E0:51:16:7:9:16 0/0:0:0:0:0:53:0%:99:1E0:45:53:25:28:54 0/0:0:0:0:0:23:0%:44:1E0:49:23:6:17:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:37:0%:70:1E0:50:37:14:23:37 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:18 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:22 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:45 0/0:0:0:0:0:21:0%:40:1E0:50:21:13:8:21 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:50 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:38 0/0:37:1:0:1:35:2.86%:55:5E-1:45:34:15:19:35 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:39:1:0:1:16:6.25%:21:5E-1:44:15:7:8:16 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:41:0%:78:1E0:40:41:16:25:42 0/0:0:0:0:0:51:0%:97:1E0:45:51:25:26:52 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:10:23:33 0/0:0:0:0:0:59:0%:99:1E0:49:59:23:36:59 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:44:0%:81:1E0:49:44:21:23:44 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:54 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:46:0%:85:1E0:45:46:26:20:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:55:0%:99:1E0:41:55:28:27:56 0/0:0:0:0:0:40:0%:74:1E0:44:40:14:26:40 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:18 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:50 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:40:34:11:23:34 0/0:0:0:0:0:57:0%:99:1E0:42:57:24:33:57 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:42 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:24 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:42 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:50:36:14:22:36 0/0:0:0:0:0:57:0%:99:1E0:43:57:33:24:58 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:60:1:0:1:34:2.94%:51:5E-1:45:33:18:15:35 0/0:0:0:0:0:44:0%:81:1E0:45:44:27:17:46 0/0:0:0:0:0:33:0%:63:1E0:51:33:15:18:33 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:20 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:50:0%:92:1E0:44:50:22:28:50 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:22 0/0:0:0:0:0:32:0%:59:1E0:47:32:10:22:34 0/0:33:1:0:1:29:3.45%:45:5E-1:45:28:10:18:30 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:49:0%:93:1E0:44:49:17:32:49 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:30 0/0:0:0:0:0:25:0%:48:1E0:51:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:60:1:0:1:40:2.5%:62:5E-1:45:39:18:21:40 0/0:0:0:0:0:14:0%:25:1E0:51:14:6:8:14 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:44 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:54:0%:99:1E0:43:54:18:36:55 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:19:0%:37:1E0:47:19:6:13:21 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:37:1:0:1:19:5.26%:28:5E-1:46:18:10:8:19 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:20 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 0/0:0:0:0:0:60:0%:99:1E0:43:60:26:34:62 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:31 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:50:0%:92:1E0:44:50:28:22:50 0/0:0:0:0:0:52:0%:96:1E0:41:52:17:35:52 0/0:0:0:0:0:17:0%:33:1E0:41:17:9:8:17 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:33 0/0:0:0:0:0:56:0%:99:1E0:41:56:26:30:58 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:45 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:24 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:63:0%:99:1E0:40:63:31:32:64 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:44 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:37 0/0:37:1:0:1:42:2.38%:66:5E-1:42:41:16:25:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:21 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:15:0%:29:1E0:40:15:7:8:15 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:40 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:48 0/0:0:0:0:0:50:0%:92:1E0:40:50:20:30:50 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:45 MTB_anc 2241263 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|ctpF_Rv1997|gene2037|transcript|Transcript_gene2037|Coding|1/1|c.1105T>G|p.Cys369Gly|1105/2718|1105/2718|369/905||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2241263T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2241263T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:43:59:33:26:59 0/0:0:0:0:0:27:0%:52:1E0:48:27:18:9:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:33:0%:63:1E0:50:33:19:14:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:52:0%:96:1E0:44:52:26:26:55 0/0:0:0:0:0:13:0%:25:1E0:50:13:7:6:14 0/0:0:0:0:0:49:0%:93:1E0:43:49:19:30:49 0/0:0:0:0:0:21:0%:40:1E0:45:21:15:6:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:24:11:35 0/0:0:0:0:0:22:0%:40:1E0:42:22:16:6:22 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:25 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:30 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:53 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:39 0/0:0:0:0:0:22:0%:40:1E0:49:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:30 0/0:0:0:0:0:15:0%:29:1E0:49:15:9:6:15 0/0:0:0:0:0:26:0%:47:1E0:42:26:19:7:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:37 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:49:0%:93:1E0:46:49:29:20:49 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:41 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:47 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:47 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:43 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/1:41:16:5:11:46:34.78%:55:3.1446E-6:44:30:13:17:48 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:40 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:37 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:42 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:41 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:37 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:51 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:45 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:29 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:22 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:41 0/0:0:0:0:0:50:0%:92:1E0:40:50:30:20:50 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:40:0%:74:1E0:49:40:21:19:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:43 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:40 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:44 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:39 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:39:0%:74:1E0:50:39:16:23:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:45 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:27:13:40 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:37 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:31 0/0:0:0:0:0:64:0%:99:1E0:41:64:31:33:66 0/0:0:0:0:0:57:0%:99:1E0:42:57:25:32:57 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:45:0%:85:1E0:39:45:26:19:47 0/0:0:0:0:0:44:0%:81:1E0:38:44:15:29:47 0/0:0:0:0:0:50:0%:92:1E0:39:50:27:23:53 0/0:0:0:0:0:40:0%:74:1E0:38:40:20:20:41 0/0:0:0:0:0:54:0%:99:1E0:38:54:26:28:56 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:43:0%:82:1E0:39:43:15:28:45 0/0:0:0:0:0:43:0%:82:1E0:40:43:15:28:47 0/0:0:0:0:0:52:0%:96:1E0:40:52:19:33:54 0/0:0:0:0:0:47:0%:89:1E0:40:47:17:30:51 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:48 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:46 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:39 0/0:0:0:0:0:62:0%:99:1E0:39:62:28:34:63 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:41:0%:78:1E0:39:41:14:27:43 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:30 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:38 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:47 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:34 MTB_anc 2241591 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|ctpF_Rv1997|gene2037|transcript|Transcript_gene2037|Coding|1/1|c.1433A>C|p.Glu478Ala|1433/2718|1433/2718|478/905||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2241591A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2241591A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:53:37:16:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:45:23:22:46:97.83%:99:1.1441E-25:60:1:0:1:46 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:51:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:46:23:23:47:97.87%:99:2.9526E-26:34:1:1:0:49 1/1:50:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:36:17:19:38:94.74%:99:1.1316E-19:38:2:1:1:38 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:23:11:12:24:95.83%:99:7.7525E-13:34:1:1:0:24 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:46:26:20:47:97.87%:99:2.9526E-26:60:1:0:1:47 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:53:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:41:19:22:42:97.62%:99:2.5612E-23:60:1:0:1:43 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:40:20:20:42:95.24%:99:5.6346E-22:49:2:2:0:42 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:43:24:19:44:97.73%:99:1.7144E-24:38:1:0:1:45 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:27:16:11:28:96.43%:99:3.7915E-15:37:1:0:1:28 1/1:40:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:29 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:49:30:19:49:100%:99:3.925E-29:0:0:0:0:53 1/1:39:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:52:25:27:53:98.11%:99:6.3169E-31:0:0:0:0:53 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 2241742 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|ctpF_Rv1997|gene2037|transcript|Transcript_gene2037|Coding|1/1|c.1584G>A|p.Pro528Pro|1584/2718|1584/2718|528/905||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2241742G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2241742G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:48:32:16:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:47:35:12:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:37:55:36:19:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:39:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:54:38:16:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:42:22:20:43:97.67%:99:6.6289E-24:38:1:1:0:43 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 2243034 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv1998c_Rv1998c|gene2038|transcript|Transcript_gene2038|Coding|1/1|c.688C>A|p.Arg230Ser|688/777|688/777|230/258||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2243034G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2243034G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:53:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:63:32:31:63:100%:99:1.657E-37:0:0:0:0:64 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:50:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:65:36:29:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:39:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:37:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:50 1/1:38:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:56:36:20:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:22 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2246960 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv2001_Rv2001|gene2041|transcript|Transcript_gene2041|Coding|1/1|c.129C>G|p.Val43Val|129/753|129/753|43/250||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2246960C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2246960C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:53:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:62:26:36:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:49:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:60:30:30:60:100%:99:1.035E-35:0:0:0:0:63 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:9:13:23:95.65%:99:2.9149E-12:38:1:1:0:23 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:69:36:33:69:100%:99:4.233E-41:0:0:0:0:71 1/1:49:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:52:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:50:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:32:15:17:33:96.97%:99:4.7095E-18:37:1:1:0:34 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:59:32:27:60:98.33%:99:4.1056E-35:0:0:0:0:60 1/1:42:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:61:25:36:61:100%:99:2.609E-36:0:0:0:0:63 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:40 MTB_anc 2248179 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|fabG3_Rv2002|gene2042|transcript|Transcript_gene2042|Coding|1/1|c.520A>G|p.Ser174Gly|520/783|520/783|174/260||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2248179A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2248179A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:16:10:6:17:94.12%:81:7.7134E-9:37:1:0:1:17 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:50:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:53:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:52:29:23:53:98.11%:99:6.3169E-31:0:0:0:0:53 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:56:37:19:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:21:13:8:22:95.45%:99:1.0931E-11:38:1:0:1:22 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:17:6:11:18:94.44%:86:2.0936E-9:60:1:0:1:19 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:52:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:29:18:11:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:52:25:27:53:98.11%:99:8.609E-30:37:1:1:0:54 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:44:28:16:45:97.78%:99:3.8097E-26:0:0:0:0:47 1/1:41:45:19:26:46:97.83%:99:1.1441E-25:60:1:1:0:47 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:49:22:27:50:98%:99:5.0549E-28:38:1:1:0:51 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 MTB_anc 2248636 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2003c_Rv2003c|gene2043|transcript|Transcript_gene2043|Coding|1/1|c.785C>T|p.Ala262Val|785/858|785/858|262/285||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2248636G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2248636G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:35 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:33:16:17:34:97.06%:99:1.2301E-18:24:1:1:0:35 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:56:39:17:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:51:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:52:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:69 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:48:28:20:49:97.96%:99:1.9625E-27:34:1:0:1:51 1/1:39:35:12:23:36:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 2253453 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|otsB1_Rv2006|gene2046|transcript|Transcript_gene2046|Coding|1/1|c.1452T>C|p.Arg484Arg|1452/3984|1452/3984|484/1327||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2253453T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2253453T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:60:18:42:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:17:6:11:18:94.44%:86:2.0936E-9:38:1:1:0:18 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:14:18:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:51:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:31:19:12:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:38:8:30:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:47:14:33:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:71:28:43:71:100%:99:2.6835E-42:0:0:0:0:73 1/1:40:61:24:37:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:39:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:59:20:39:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:80:31:49:80:100%:99:1.0864E-47:0:0:0:0:82 1/1:41:59:20:39:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:13:16:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:56:16:40:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 2255178 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|otsB1_Rv2006|gene2046|transcript|Transcript_gene2046|Coding|1/1|c.3177G>A|p.Leu1059Leu|3177/3984|3177/3984|1059/1327||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2255178G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2255178G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:48 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:44 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:38 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:41:0%:78:1E0:48:41:22:19:41 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:27 0/0:0:0:0:0:39:0%:74:1E0:48:39:18:21:40 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:51:0%:97:1E0:44:51:34:17:52 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:30 0/0:0:0:0:0:33:0%:63:1E0:48:33:22:11:33 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:18 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:22 0/0:0:0:0:0:23:0%:44:1E0:51:23:15:8:23 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:14 0/0:0:0:0:0:60:0%:99:1E0:47:60:29:31:61 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:24 0/0:0:0:0:0:27:0%:52:1E0:50:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:46:30:11:19:30 0/0:0:0:0:0:25:0%:48:1E0:49:25:9:16:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:28 0/0:0:0:0:0:30:0%:55:1E0:51:30:15:15:31 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:63:0%:99:1E0:47:63:34:29:63 0/0:0:0:0:0:36:0%:66:1E0:48:36:24:12:36 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:52:0%:96:1E0:47:52:21:31:53 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:8:21:29 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:38:0%:70:1E0:46:38:23:15:38 0/0:0:0:0:0:28:0%:51:1E0:52:28:19:9:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:13:0%:25:1E0:46:13:8:5:14 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:55:0%:99:1E0:49:55:26:29:56 0/0:0:0:0:0:34:0%:62:1E0:47:34:12:22:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:42 0/0:0:0:0:0:40:0%:74:1E0:51:40:22:18:40 0/0:0:0:0:0:25:0%:48:1E0:47:25:17:8:25 0/0:0:0:0:0:67:0%:99:1E0:45:67:35:32:68 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 0/0:0:0:0:0:18:0%:32:1E0:54:18:6:12:18 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:37 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:23 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:38:0%:70:1E0:51:38:22:16:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:6:17:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:19:11:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:18:11:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:27 0/0:0:0:0:0:32:0%:59:1E0:49:32:11:21:34 0/0:0:0:0:0:25:0%:48:1E0:48:25:18:7:25 0/0:0:0:0:0:44:0%:81:1E0:48:44:26:18:44 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:0:0:0:0:26:0%:48:1E0:49:25:10:15:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:20:0%:36:1E0:43:20:14:6:20 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:48 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:47:0%:89:1E0:48:47:26:21:47 0/0:60:1:0:1:27:3.7%:41:5E-1:44:26:13:13:28 0/0:35:1:1:0:31:3.23%:48:5E-1:44:30:19:11:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:37:0%:70:1E0:41:37:25:12:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:10:24:37 0/0:0:0:0:0:53:0%:99:1E0:40:53:33:20:53 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:36 0/0:0:0:0:0:44:0%:81:1E0:47:44:19:25:44 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:70:0%:99:1E0:43:70:37:33:70 0/0:0:0:0:0:49:0%:93:1E0:43:49:30:19:53 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:29 0/0:0:0:0:0:51:0%:97:1E0:40:51:24:27:53 0/0:0:0:0:0:45:0%:85:1E0:42:45:17:28:46 0/0:0:0:0:0:47:0%:89:1E0:41:47:18:29:49 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:42 0/0:0:0:0:0:60:0%:99:1E0:42:60:32:28:61 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:45 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:17:26:43 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:47 0/0:0:0:0:0:41:0%:78:1E0:39:41:20:21:43 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:38 0/0:0:0:0:0:54:0%:99:1E0:39:54:28:26:57 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:49 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:48 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:49 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:40 0/0:0:0:0:0:52:0%:96:1E0:44:52:28:24:52 0/0:0:0:0:0:55:0%:99:1E0:45:55:30:25:55 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 MTB_anc 2258518 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|vapC15_Rv2010|gene2050|transcript|Transcript_gene2050|Coding|1/1|c.246G>A|p.Arg82Arg|246/399|246/399|82/132||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2258518G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2258518G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:47:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:48:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:29:13:16:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:52:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:51:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:37:17:20:38:97.37%:99:5.6582E-21:60:1:0:1:39 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:65:27:38:65:100%:99:1.0519E-38:0:0:0:0:69 1/1:42:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:48:29:19:48:100%:99:1.554E-28:0:0:0:0:52 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:40:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:49:26:23:50:98%:99:5.0549E-28:37:1:0:1:50 1/1:40:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 MTB_anc 2260100 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|Rv2012_Rv2012-Rv2015c_Rv2015c|gene2052-gene2053|intergenic_region|gene2052-gene2053|||n.2260100T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:18:8:10:19:94.74%:92:5.6585E-10:60:1:1:0:19 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:55:23:32:56:98.21%:99:1.0149E-32:0:0:0:0:56 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:16:16:34:94.12%:99:5.4567E-19:0:0:0:0:35 1/1:41:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:32:13:19:33:96.97%:99:4.7095E-18:37:1:0:1:33 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:33:9:24:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:36:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:61:19:42:61:100%:99:2.609E-36:0:0:0:0:63 1/1:41:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 MTB_anc 2262857 . C T . PASS AC=38;AF=1.00;AN=38;ANN=T|synonymous_variant|LOW|Rv2015c_Rv2015c|gene2053|transcript|Transcript_gene2053|Coding|1/1|c.216G>A|p.Ser72Ser|216/1257|216/1257|72/418||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2262857C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2262857C>T||||||;HET=0;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:17:17:0:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 2263760 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2016_Rv2016|gene2054|transcript|Transcript_gene2054|Coding|1/1|c.335C>T|p.Pro112Leu|335/576|335/576|112/191||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2263760C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2263760C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:50:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:47:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:50 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:37 MTB_anc 2269543 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv2024c_Rv2024c|gene2062|transcript|Transcript_gene2062|Coding|1/1|c.698A>G|p.Gln233Arg|698/1548|698/1548|233/515||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2269543T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2269543T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:58:0%:99:1E0:43:58:36:22:62 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:54:0%:99:1E0:46:54:21:33:54 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:25:8:33 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:7:19:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:13:7:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:28 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:50 0/0:0:0:0:0:19:0%:37:1E0:52:19:12:7:19 0/0:0:0:0:0:52:0%:96:1E0:47:52:27:25:52 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:21:0%:40:1E0:48:21:7:14:21 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:63:0%:99:1E0:46:63:36:27:63 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:46:0%:85:1E0:44:46:28:18:48 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:44 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:17 0/0:0:0:0:0:45:0%:85:1E0:43:45:27:18:45 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:27:0%:52:1E0:51:27:15:12:27 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:45 0/0:0:0:0:0:31:0%:59:1E0:51:31:16:15:31 0/0:60:1:0:1:36:2.78%:55:5E-1:45:35:19:16:36 0/0:0:0:0:0:44:0%:81:1E0:45:44:28:16:45 0/0:0:0:0:0:48:0%:89:1E0:48:48:27:21:48 0/0:0:0:0:0:47:0%:89:1E0:47:47:25:22:47 0/0:0:0:0:0:56:0%:99:1E0:47:56:32:24:56 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:44 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:49 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:48 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:47 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:41 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:52 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:17:29:48 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:41:0%:78:1E0:48:41:22:19:42 0/0:0:0:0:0:46:0%:85:1E0:45:46:30:16:48 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:37 0/0:0:0:0:0:50:0%:92:1E0:46:50:26:24:50 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:17 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:29:0%:55:1E0:51:29:13:16:29 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:20 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:28 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:32 0/0:39:1:1:0:27:3.7%:41:5E-1:50:26:16:10:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:64:0%:99:1E0:45:64:34:30:64 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:41 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:36 0/0:0:0:0:0:35:0%:67:1E0:39:35:22:13:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:48:36:13:23:37 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:26 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:44 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:35 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:38 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:36 0/0:0:0:0:0:18:0%:32:1E0:42:18:4:14:19 0/0:0:0:0:0:63:0%:99:1E0:41:63:32:31:64 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:28 0/0:0:0:0:0:14:0%:25:1E0:42:14:8:6:14 0/0:0:0:0:0:57:0%:99:1E0:40:57:27:30:59 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:43:4:3:1:47:8.51%:53:5.849E-2:42:43:23:20:47 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:51:0%:97:1E0:39:51:27:24:53 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:44 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:49 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:37:0%:70:1E0:38:37:21:16:40 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:23:10:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:44 0/0:0:0:0:0:56:0%:99:1E0:39:56:27:29:56 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:43 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:42:0%:77:1E0:39:42:27:15:43 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:50 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 MTB_anc 2270264 . A C . PASS AC=68;AF=0.227;AN=300;ANN=C|intergenic_region|MODIFIER|Rv2024c_Rv2024c-Rv2025c_Rv2025c|gene2062-gene2063|intergenic_region|gene2062-gene2063|||n.2270264A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:63:0%:99:1E0:43:63:34:29:64 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:54:0%:99:1E0:43:54:19:35:55 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 1/1:48:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:20:11:9:21:95.24%:99:4.0873E-11:29:1:0:1:21 0/0:0:0:0:0:48:0%:89:1E0:51:48:24:24:48 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:20:0%:36:1E0:48:20:8:12:20 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 1/1:45:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 0/0:0:0:0:0:62:0%:99:1E0:42:62:30:32:66 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:38:1:0:1:50:2%:80:5E-1:42:49:19:30:52 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:23 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:43 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:23:8:31 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:31:0%:59:1E0:50:31:18:13:31 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:69:0%:99:1E0:47:69:39:30:71 0/0:0:0:0:0:51:0%:97:1E0:44:51:22:29:53 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:45 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:15:29:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:7:18:27 0/0:0:0:0:0:50:0%:92:1E0:44:50:21:29:52 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:46:0%:85:1E0:46:46:20:26:46 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:26 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:46 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:44:0%:81:1E0:43:44:14:30:46 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:35 1/1:44:22:11:11:23:95.65%:99:2.9149E-12:38:1:0:1:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:37 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:16:18:35:97.14%:99:3.2089E-19:26:1:1:0:35 0/0:0:0:0:0:22:0%:40:1E0:48:22:4:18:24 0/0:0:0:0:0:19:0%:37:1E0:43:19:16:3:19 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 1/1:48:29:15:14:31:93.55%:99:1.1344E-15:60:2:1:1:31 0/0:0:0:0:0:16:0%:29:1E0:47:16:3:13:16 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:41 0/0:0:0:0:0:30:0%:55:1E0:49:30:11:19:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:25 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:19 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:21 0/0:0:0:0:0:54:0%:99:1E0:40:54:21:33:55 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:26 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:34 0/0:0:0:0:0:32:0%:59:1E0:45:32:10:22:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:44 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:41 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:36 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:28 0/0:0:0:0:0:52:0%:96:1E0:41:52:23:29:54 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 1/1:38:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:42 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:52 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:36 0/0:0:0:0:0:38:0%:70:1E0:36:38:19:19:41 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:43 0/0:0:0:0:0:48:0%:89:1E0:41:48:18:30:49 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:36 1/1:38:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:41 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:52:0%:96:1E0:38:52:23:29:56 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:45 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 1/1:38:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:48:0%:89:1E0:40:48:19:29:52 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:44 MTB_anc 2271751 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv2025c_Rv2025c-Rv2026c_Rv2026c|gene2063-gene2064|intergenic_region|gene2063-gene2064|||n.2271751G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:25:18:7:26:96.15%:99:5.4444E-14:37:1:0:1:26 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:68:39:29:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:52:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:59:21:38:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:55:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:51:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:30:14:16:31:96.77%:99:8.4556E-18:0:0:0:0:34 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:38:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:49:19:30:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:44:19:25:45:97.78%:99:4.4304E-25:38:1:1:0:46 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:62:25:37:63:98.41%:99:1.0605E-35:60:1:1:0:64 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 MTB_anc 2274544 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|intergenic_region|MODIFIER|dosT_Rv2027c-Rv2028c_Rv2028c|gene2065-gene2066|intergenic_region|gene2065-gene2066|||n.2274544C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:38:39:15:24:40 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:57:0%:99:1E0:42:57:21:36:58 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:6:12:19 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:36 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:19 0/0:0:0:0:0:19:0%:37:1E0:42:19:6:13:19 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:47:0%:89:1E0:40:47:14:33:47 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:22 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:22 0/0:0:0:0:0:19:0%:37:1E0:47:19:5:14:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:44:0%:81:1E0:41:44:16:28:45 0/0:0:0:0:0:32:0%:59:1E0:39:32:10:22:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:68:0%:99:1E0:41:68:33:35:69 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:39 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:14 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:8:22:31 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:0:0:0:0:32:0%:59:1E0:39:32:8:24:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:29 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:51 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:38 0/0:0:0:0:0:36:0%:66:1E0:38:36:11:25:37 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:45 0/0:0:0:0:0:67:0%:99:1E0:41:67:35:32:69 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:12:22:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:22:8:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:22 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:40 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:35 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:38 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:17:0%:33:1E0:40:17:6:11:17 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:19 0/0:0:0:0:0:43:0%:82:1E0:39:43:16:27:43 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:38:1:1:0:47:2.13%:77:5E-1:41:46:29:17:47 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:16 0/0:0:0:0:0:19:0%:37:1E0:38:19:5:14:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:36 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:33 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:26 0/0:0:0:0:0:25:0%:48:1E0:37:25:7:18:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:20 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:28 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:23 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:30 0/0:0:0:0:0:27:0%:52:1E0:37:27:8:19:27 0/0:0:0:0:0:40:0%:74:1E0:39:40:15:25:40 0/0:0:0:0:0:25:0%:48:1E0:39:25:7:18:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:43 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 0/0:0:0:0:0:52:0%:96:1E0:38:52:23:29:54 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:25 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:47:0%:89:1E0:37:47:19:28:48 0/0:0:0:0:0:37:0%:70:1E0:38:37:14:23:40 0/0:0:0:0:0:53:0%:99:1E0:39:53:16:37:53 0/0:0:0:0:0:41:0%:78:1E0:37:41:11:30:42 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:30 0/0:0:0:0:0:48:0%:89:1E0:39:48:16:32:49 0/0:0:0:0:0:41:0%:78:1E0:39:41:15:26:42 0/0:0:0:0:0:33:0%:63:1E0:40:33:10:23:34 0/0:0:0:0:0:37:0%:70:1E0:38:37:10:27:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:37:29:10:19:31 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:21 0/0:0:0:0:0:52:0%:96:1E0:38:52:17:35:52 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:29 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:32 0/0:0:0:0:0:42:0%:77:1E0:37:42:14:28:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:21 0/0:0:0:0:0:36:0%:66:1E0:39:36:12:24:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:39 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:34 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:34 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:47 0/0:0:0:0:0:51:0%:97:1E0:40:51:21:30:51 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 MTB_anc 2280433 . A AC . PASS AC=4;AF=0.013;AN=300;ANN=AC|frameshift_variant|HIGH|Rv2033c_Rv2033c|gene2071|transcript|Transcript_gene2071|Coding|1/1|c.649dupG|p.Val217fs|649/843|649/843|217/280||,AC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2280433_2280434insC||||||,AC|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2280433_2280434insC||||||;HET=0;LOF=(Rv2033c_Rv2033c|gene2071|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:57 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:37:1:1:0:36:2.78%:55:5E-1:45:35:16:19:36 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:20 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:26 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:15 0/0:0:0:0:0:36:0%:66:1E0:43:36:11:25:36 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:25 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:21 0/0:0:0:0:0:51:0%:97:1E0:40:51:25:26:54 0/0:0:0:0:0:12:0%:21:1E0:45:12:7:5:13 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:45 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:6:13:19 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:30 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:45 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:43:0%:82:1E0:40:43:23:20:45 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:53:0%:96:1E0:43:52:26:26:53 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:44 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:42 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:33 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:34 0/0:0:0:0:0:52:0%:96:1E0:38:52:26:26:54 0/0:0:0:0:0:55:0%:99:1E0:40:55:31:24:57 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:57:0%:99:1E0:43:57:32:25:57 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:34 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:52 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:23 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:46 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:37 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:46 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:62:0%:99:1E0:44:62:33:29:63 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:34 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:35 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:15:0%:29:1E0:48:15:8:7:16 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:20 0/0:0:0:0:0:59:0%:99:1E0:39:59:30:29:60 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:19 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:32 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:41 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:33 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:20 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:25 0/0:0:0:0:0:16:0%:29:1E0:42:16:12:4:18 0/0:0:0:0:0:28:0%:51:1E0:50:28:16:12:29 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:39 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:21 0/0:0:0:0:0:18:0%:32:1E0:49:18:10:8:18 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:49 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:48 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:35 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:30 0/0:0:0:0:0:43:0%:82:1E0:39:43:18:25:44 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:25 0/0:0:0:0:0:23:0%:44:1E0:35:23:9:14:25 0/0:0:0:0:0:17:0%:33:1E0:46:17:12:5:17 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:31 0/0:0:0:0:0:42:0%:77:1E0:38:42:22:20:42 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:39 0/0:0:0:0:0:34:0%:62:1E0:36:34:17:17:38 0/0:0:0:0:0:49:0%:93:1E0:38:49:27:22:54 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:32 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:47 1/1:36:29:15:14:26:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:40:19:21:43:93.02%:99:2.287E-21:28:3:2:1:43 0/0:0:0:0:0:56:0%:99:1E0:41:56:22:34:60 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:28 0/0:0:0:0:0:51:0%:97:1E0:38:51:24:27:56 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:19 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:50 0/0:0:0:0:0:29:0%:55:1E0:35:29:9:20:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:40 0/0:0:0:0:0:30:0%:55:1E0:37:30:7:23:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:33 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:42 0/0:0:0:0:0:31:0%:59:1E0:36:31:19:12:41 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:35 0/0:0:0:0:0:38:0%:70:1E0:36:38:19:19:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:64:0%:99:1E0:38:64:33:31:65 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:41 0/0:0:0:0:0:49:0%:93:1E0:38:49:21:28:50 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:40 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:32 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:41 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:43 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:10 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:55:0%:99:1E0:41:55:28:27:59 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 MTB_anc 2282376 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2036_Rv2036|gene2074|transcript|Transcript_gene2074|Coding|1/1|c.278T>C|p.Val93Ala|278/642|278/642|93/213||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2282376T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2282376T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:49:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:45:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:53:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:32:14:18:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:48:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:47:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:28:9:19:29:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:51 1/1:42:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:40:23:17:41:97.56%:99:9.8874E-23:24:1:0:1:42 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 2282377 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv2036_Rv2036|gene2074|transcript|Transcript_gene2074|Coding|1/1|c.279T>C|p.Val93Val|279/642|279/642|93/213||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2282377T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2282377T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:49:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:47:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:52:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:47:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:34:16:18:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:56:35:21:57:98.25%:99:2.5602E-33:0:0:0:0:57 1/1:43:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:49:29:20:50:98%:99:3.925E-29:0:0:0:0:52 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:45:33:12:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:41:16:25:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2282623 . CG C . PASS AC=34;AF=0.113;AN=300;ANN=C|frameshift_variant|HIGH|Rv2036_Rv2036|gene2074|transcript|Transcript_gene2074|Coding|1/1|c.528delG|p.Glu178fs|528/642|528/642|176/213||INFO_REALIGN_3_PRIME,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2282624delG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2282624delG||||||;HET=0;LOF=(Rv2036_Rv2036|gene2074|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:49 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 1/1:50:38:25:13:39:97.44%:99:1.4697E-21:34:1:0:1:39 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:35:0%:67:1E0:49:35:21:14:35 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:60:1:0:1:23:4.35%:34:5E-1:47:22:12:10:23 0/0:0:0:0:0:25:0%:48:1E0:50:25:6:19:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:46 0/0:0:0:0:0:14:0%:25:1E0:46:14:9:5:14 0/0:0:0:0:0:55:0%:99:1E0:42:55:40:15:56 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:46 0/0:0:0:0:0:23:0%:44:1E0:43:23:17:6:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:20:10:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:26:10:36 0/0:0:0:0:0:60:0%:99:1E0:44:60:37:23:62 0/0:0:0:0:0:23:0%:44:1E0:49:23:9:14:23 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:15:0%:29:1E0:48:15:9:6:15 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:22 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:49:33:20:13:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:58:0%:99:1E0:47:58:32:26:58 1/1:44:43:28:15:43:97.73%:99:1.7144E-24:32:1:1:0:44 0/0:0:0:0:0:51:0%:97:1E0:46:51:26:25:51 0/0:0:0:0:0:43:0%:82:1E0:45:43:27:16:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:26:15:42 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:25:12:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:58:0%:99:1E0:42:58:33:25:58 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:47 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:15:0%:29:1E0:41:15:10:5:15 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:48 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:35 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:38 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:53 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:48 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:29 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:50 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:42 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:53 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:23 0/0:0:0:0:0:41:0%:78:1E0:48:41:21:20:41 0/0:0:0:0:0:62:0%:99:1E0:47:62:34:28:65 0/0:0:0:0:0:33:0%:63:1E0:46:33:24:9:35 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:19:0%:37:1E0:42:19:14:5:19 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:26 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:34 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:17 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:32 0/0:0:0:0:0:43:0%:82:1E0:41:43:25:18:43 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:53:0%:99:1E0:46:53:30:23:53 0/0:38:1:1:0:41:2.44%:66:5E-1:40:40:23:17:42 1/1:46:31:22:9:32:96.88%:99:1.8007E-17:60:1:0:1:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:20 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:35 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:55 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:30 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:49 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:39:0%:74:1E0:48:39:22:17:39 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:24:0%:44:1E0:39:24:17:7:24 0/0:38:1:1:0:23:4.35%:34:5E-1:45:22:11:11:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:25:21:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:31 1/1:51:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:43 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:38:1:1:0:33:3.03%:52:5E-1:43:32:18:14:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:17:5:22 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:35 1/1:41:36:23:13:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:40:15:25:38:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:65:0%:99:1E0:43:65:32:33:65 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:52 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 0/0:33:1:0:1:54:1.85%:87:5E-1:38:53:34:19:56 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:42 1/1:43:51:29:22:51:96.23%:99:2.3675E-28:31:2:0:2:53 1/1:36:38:18:20:36:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:41:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:45 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:47 0/0:0:0:0:0:39:0%:74:1E0:38:39:25:14:39 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:44 1/1:41:39:21:18:40:97.5%:99:3.8137E-22:33:1:0:1:40 0/0:0:0:0:0:51:0%:97:1E0:40:51:31:20:52 0/0:0:0:0:0:36:0%:66:1E0:39:36:10:26:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:40 0/0:0:0:0:0:46:0%:85:1E0:40:46:26:20:46 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:43 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:43 0/0:0:0:0:0:60:0%:99:1E0:42:60:34:26:61 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:33 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:19:15:35:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:34 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:42 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:46 0/0:0:0:0:0:44:0%:81:1E0:40:44:24:20:44 MTB_anc 2292541 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv2047c_Rv2047c|gene2085|transcript|Transcript_gene2085|Coding|1/1|c.1986C>T|p.Tyr662Tyr|1986/2565|1986/2565|662/854||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2292541G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2292541G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:45:51:29:22:52 0/0:0:0:0:0:7:0%:14:1E0:53:7:5:2:8 0/0:0:0:0:0:46:0%:85:1E0:46:46:23:23:47 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:38:1:1:0:29:3.45%:45:5E-1:46:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:23:8:31 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:11:0%:22:1E0:52:11:6:5:11 0/0:0:0:0:0:53:0%:99:1E0:45:53:23:30:53 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:23:0%:44:1E0:50:23:10:13:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:25:0%:48:1E0:51:25:9:16:25 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:20 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:49 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:45 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:40 0/0:0:0:0:0:51:0%:97:1E0:46:51:23:28:51 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:39 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:45 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:37 0/0:0:0:0:0:33:0%:63:1E0:42:33:10:23:34 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:44 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:21 0/0:0:0:0:0:50:0%:92:1E0:40:50:27:23:50 0/0:0:0:0:0:17:0%:33:1E0:46:17:5:12:17 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:48:0%:89:1E0:43:48:29:19:48 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:20:8:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:19:5:24 0/0:0:0:0:0:43:0%:82:1E0:44:43:27:16:44 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:46 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:15:0%:29:1E0:40:15:5:10:16 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:42 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:23 0/0:60:1:1:0:23:4.35%:34:5E-1:43:22:9:13:23 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:56:0%:99:1E0:41:56:29:27:56 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:7:22:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:33:1:0:1:15:6.67%:21:5E-1:44:14:8:6:15 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:48 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:38:1:1:0:55:1.82%:91:5E-1:45:54:32:22:56 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:18 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:43 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:26 0/0:0:0:0:0:13:0%:25:1E0:46:13:5:8:14 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:22:0%:40:1E0:36:22:17:5:24 0/0:0:0:0:0:53:0%:99:1E0:39:53:32:21:53 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:66:0%:99:1E0:47:66:32:34:66 0/0:0:0:0:0:51:0%:97:1E0:41:51:18:33:52 0/0:0:0:0:0:16:0%:29:1E0:42:16:10:6:16 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:27 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:35:0%:67:1E0:37:35:9:26:36 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:47 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:31 0/0:0:0:0:0:58:0%:99:1E0:41:58:25:33:59 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:35 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:21 0/0:0:0:0:0:32:0%:59:1E0:40:32:21:11:32 0/0:0:0:0:0:43:0%:82:1E0:39:43:17:26:44 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:28:14:42 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:22 0/1:42:23:12:11:28:82.14%:99:3.103E-11:41:5:3:2:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:23:12:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:60:1:0:1:43:2.33%:70:5E-1:44:42:21:21:43 MTB_anc 2295692 . C T . PASS AC=75;AF=0.987;AN=76;ANN=T|synonymous_variant|LOW|pks12_Rv2048c|gene2086|transcript|Transcript_gene2086|Coding|1/1|c.11295G>A|p.Val3765Val|11295/12456|11295/12456|3765/4151||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2295692C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2295692C>T||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./. 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./. 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:4:4:9:88.89%:36:2.0568E-4:34:1:1:0:9 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./. 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:10:8:2:11:90.91%:47:1.7011E-5:39:1:1:0:11 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 MTB_anc 2295917 . C T . PASS AC=298;AF=1.00;AN=298;ANN=T|synonymous_variant|LOW|pks12_Rv2048c|gene2086|transcript|Transcript_gene2086|Coding|1/1|c.11070G>A|p.Leu3690Leu|11070/12456|11070/12456|3690/4151||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2295917C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2295917C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:51:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:50:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:45:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:17:8:9:18:94.44%:86:2.0936E-9:60:1:0:1:19 1/1:54:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:10:7:3:11:90.91%:47:1.7011E-5:60:1:0:1:11 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:54:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:49:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:13:6:7:14:92.86%:64:3.7391E-7:38:1:1:0:14 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:21:11:10:22:95.45%:99:1.0931E-11:37:1:0:1:22 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:50:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:51:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:51:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:52:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:56:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:50:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:53:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:17:9:27:96.3%:99:1.4382E-14:39:1:1:0:27 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 MTB_anc 2296181 . A G . PASS AC=294;AF=1.00;AN=294;ANN=G|synonymous_variant|LOW|pks12_Rv2048c|gene2086|transcript|Transcript_gene2086|Coding|1/1|c.10806T>C|p.Gly3602Gly|10806/12456|10806/12456|3602/4151||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2296181A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2296181A>G||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:24:15:9:25:96%:99:2.0568E-13:39:1:1:0:26 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:35:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:24:13:11:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:47:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:19:10:9:20:95%:98:1.5234E-10:32:1:0:1:20 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:18:9:9:19:94.74%:99:1.1019E-10:0:0:0:0:20 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:24:22:2:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:36:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:30:25:5:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:35:24:11:36:97.22%:99:8.3613E-20:60:1:0:1:39 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:28:16:12:29:96.55%:99:9.9776E-16:38:1:1:0:31 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:15:12:3:16:93.75%:75:2.8282E-8:39:1:1:0:17 MTB_anc 2297160 . C G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|pks12_Rv2048c|gene2086|transcript|Transcript_gene2086|Coding|1/1|c.9827G>C|p.Ser3276Thr|9827/12456|9827/12456|3276/4151||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2297160C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2297160C>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:24:0%:44:1E0:35:24:13:11:25 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:13 0/0:0:0:0:0:42:0%:77:1E0:37:42:27:15:42 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:17 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:16 0/0:0:0:0:0:13:0%:25:1E0:36:13:11:2:14 0/0:0:0:0:0:30:0%:55:1E0:36:30:23:7:31 0/0:0:0:0:0:19:0%:37:1E0:37:19:15:4:20 0/0:0:0:0:0:21:0%:40:1E0:36:21:17:4:21 0/0:0:0:0:0:32:0%:59:1E0:37:32:24:8:32 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:24 0/0:0:0:0:0:21:0%:40:1E0:38:21:18:3:21 0/0:0:0:0:0:10:0%:17:1E0:38:10:6:4:10 0/0:0:0:0:0:26:0%:47:1E0:38:26:20:6:26 0/0:0:0:0:0:18:0%:32:1E0:37:18:16:2:18 0/0:0:0:0:0:29:0%:55:1E0:37:29:17:12:29 0/0:0:0:0:0:11:0%:22:1E0:38:11:7:4:11 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:15 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:16 0/0:0:0:0:0:26:0%:47:1E0:36:26:19:7:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:23 0/0:0:0:0:0:36:0%:66:1E0:36:36:21:15:36 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:36:34:23:11:35 0/0:0:0:0:0:17:0%:33:1E0:36:17:16:1:17 0/0:0:0:0:0:16:0%:29:1E0:39:16:11:5:16 0/0:0:0:0:0:22:0%:40:1E0:35:22:16:6:23 0/0:0:0:0:0:13:0%:25:1E0:35:13:9:4:13 0/0:0:0:0:0:22:0%:40:1E0:36:22:17:5:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:17:9:26 0/0:0:0:0:0:24:0%:44:1E0:36:24:17:7:24 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:18 0/0:0:0:0:0:30:0%:55:1E0:37:30:18:12:31 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:17:6:23 0/0:0:0:0:0:24:0%:44:1E0:36:24:16:8:25 0/0:0:0:0:0:26:0%:47:1E0:37:26:18:8:26 0/0:0:0:0:0:44:0%:81:1E0:36:44:27:17:44 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:31 0/0:0:0:0:0:27:0%:52:1E0:36:27:15:12:27 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:19 0/0:0:0:0:0:32:0%:59:1E0:36:32:21:11:32 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:19 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:18:10:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:15:3:18 0/0:0:0:0:0:19:0%:37:1E0:38:19:15:4:19 0/0:0:0:0:0:24:0%:44:1E0:35:24:15:9:24 0/0:0:0:0:0:31:0%:59:1E0:38:31:24:7:31 0/0:0:0:0:0:19:0%:37:1E0:37:19:14:5:19 0/0:0:0:0:0:27:0%:52:1E0:37:27:22:5:27 0/0:0:0:0:0:15:0%:29:1E0:36:15:10:5:15 0/0:0:0:0:0:25:0%:48:1E0:37:25:18:7:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:22 0/0:0:0:0:0:23:0%:44:1E0:36:23:19:4:26 0/0:0:0:0:0:21:0%:40:1E0:35:21:18:3:21 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:18 0/0:0:0:0:0:27:0%:52:1E0:37:27:19:8:27 0/0:0:0:0:0:27:0%:52:1E0:36:27:16:11:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:21:2:23 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:27 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:16 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:20 0/0:0:0:0:0:28:0%:51:1E0:35:28:19:9:28 0/0:0:0:0:0:36:0%:66:1E0:37:36:23:13:36 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:16 0/0:0:0:0:0:31:0%:59:1E0:36:31:19:12:31 0/0:0:0:0:0:14:0%:25:1E0:40:14:11:3:14 0/0:0:0:0:0:14:0%:25:1E0:42:14:8:6:15 0/0:0:0:0:0:24:0%:44:1E0:37:24:20:4:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:12:7:19 0/0:0:0:0:0:13:0%:25:1E0:39:13:8:5:13 0/0:0:0:0:0:27:0%:52:1E0:37:27:22:5:27 0/0:0:0:0:0:21:0%:40:1E0:36:21:14:7:21 0/0:0:0:0:0:18:0%:32:1E0:36:18:14:4:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:20 0/0:0:0:0:0:20:0%:36:1E0:40:20:15:5:20 0/0:0:0:0:0:20:0%:36:1E0:35:20:17:3:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:13 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:21 0/0:0:0:0:0:35:0%:67:1E0:37:35:24:11:36 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:22 0/0:0:0:0:0:20:0%:36:1E0:37:20:14:6:20 0/0:0:0:0:0:19:0%:37:1E0:36:19:13:6:21 0/0:0:0:0:0:18:0%:32:1E0:37:18:15:3:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:21:7:29 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:16 0/0:0:0:0:0:24:0%:44:1E0:36:24:18:6:24 0/1:36:7:4:3:18:38.89%:24:3.8123E-3:36:11:6:5:18 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:30 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:12 0/0:0:0:0:0:23:0%:44:1E0:37:23:14:9:23 0/0:0:0:0:0:26:0%:47:1E0:37:26:19:7:26 0/0:0:0:0:0:32:0%:59:1E0:36:32:21:11:33 0/0:0:0:0:0:21:0%:40:1E0:36:21:15:6:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:23 0/0:0:0:0:0:24:0%:44:1E0:37:24:16:8:24 0/0:0:0:0:0:28:0%:51:1E0:35:28:22:6:28 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:14 0/0:0:0:0:0:19:0%:37:1E0:37:19:14:5:19 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:12 0/0:0:0:0:0:28:0%:51:1E0:37:28:23:5:30 0/0:0:0:0:0:20:0%:36:1E0:35:20:14:6:21 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:10 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:19 0/0:0:0:0:0:17:0%:33:1E0:37:17:13:4:17 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:20 0/0:0:0:0:0:21:0%:40:1E0:37:21:15:6:21 0/0:0:0:0:0:22:0%:40:1E0:35:22:14:8:22 0/0:0:0:0:0:25:0%:48:1E0:36:25:16:9:25 0/0:0:0:0:0:12:0%:21:1E0:37:12:7:5:12 0/0:0:0:0:0:20:0%:36:1E0:37:20:16:4:20 0/0:0:0:0:0:26:0%:47:1E0:36:26:20:6:27 0/0:0:0:0:0:21:0%:40:1E0:34:21:14:7:21 0/0:0:0:0:0:35:0%:67:1E0:37:35:28:7:35 0/0:0:0:0:0:22:0%:40:1E0:35:22:14:8:24 0/0:0:0:0:0:27:0%:52:1E0:36:27:18:9:28 0/0:0:0:0:0:17:0%:33:1E0:35:17:11:6:17 0/0:0:0:0:0:25:0%:48:1E0:36:25:18:7:25 0/0:0:0:0:0:32:0%:59:1E0:36:32:18:14:32 0/0:0:0:0:0:13:0%:25:1E0:36:13:11:2:13 0/0:0:0:0:0:15:0%:29:1E0:37:15:9:6:15 0/0:0:0:0:0:27:0%:52:1E0:35:27:20:7:27 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 0/0:0:0:0:0:33:0%:63:1E0:36:33:25:8:34 0/0:0:0:0:0:10:0%:17:1E0:34:10:5:5:10 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:19 0/0:0:0:0:0:32:0%:59:1E0:35:32:18:14:33 0/0:0:0:0:0:21:0%:40:1E0:35:21:15:6:21 0/0:0:0:0:0:15:0%:29:1E0:36:15:12:3:18 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:21 0/0:0:0:0:0:16:0%:29:1E0:35:16:13:3:16 0/0:0:0:0:0:18:0%:32:1E0:35:18:12:6:18 0/0:0:0:0:0:11:0%:22:1E0:34:11:9:2:11 0/0:0:0:0:0:22:0%:40:1E0:36:22:18:4:22 0/0:0:0:0:0:44:0%:81:1E0:36:44:37:7:44 0/0:0:0:0:0:30:0%:55:1E0:35:30:20:10:30 0/0:0:0:0:0:27:0%:52:1E0:36:27:20:7:27 0/0:0:0:0:0:40:0%:74:1E0:36:40:31:9:41 0/0:0:0:0:0:21:0%:40:1E0:34:21:16:5:21 0/0:0:0:0:0:10:0%:17:1E0:37:10:7:3:10 0/0:0:0:0:0:17:0%:33:1E0:36:17:11:6:17 0/0:0:0:0:0:23:0%:44:1E0:36:23:19:4:23 0/0:0:0:0:0:23:0%:44:1E0:36:23:15:8:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:13:6:20 0/0:0:0:0:0:25:0%:48:1E0:36:25:16:9:25 0/0:0:0:0:0:37:0%:70:1E0:36:37:28:9:37 0/0:0:0:0:0:33:0%:63:1E0:36:33:24:9:33 0/0:0:0:0:0:26:0%:47:1E0:36:26:21:5:27 MTB_anc 2301089 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|pks12_Rv2048c|gene2086|transcript|Transcript_gene2086|Coding|1/1|c.5898G>A|p.Leu1966Leu|5898/12456|5898/12456|1966/4151||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2301089C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2301089C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:53:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:49:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:54:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:60:28:32:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:51:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:66:39:27:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:54:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:24:12:37:97.3%:99:2.1762E-20:39:1:1:0:37 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:55:39:16:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 MTB_anc 2302271 . A G . PASS AC=176;AF=0.591;AN=298;ANN=G|synonymous_variant|LOW|pks12_Rv2048c|gene2086|transcript|Transcript_gene2086|Coding|1/1|c.4716T>C|p.Gly1572Gly|4716/12456|4716/12456|1572/4151||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2302271A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2302271A>G||||||;HET=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:33 0/0:0:0:0:0:8:0%:14:1E0:44:8:6:2:8 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 0/0:0:0:0:0:20:0%:36:1E0:38:20:18:2:21 1/1:37:12:6:6:13:92.31%:64:3.698E-7:0:0:0:0:13 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 0/0:0:0:0:0:16:0%:29:1E0:40:16:11:5:17 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 0/0:0:0:0:0:11:0%:22:1E0:38:11:8:3:11 0/0:0:0:0:0:17:0%:33:1E0:38:17:12:5:19 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:32:0%:59:1E0:39:32:23:9:34 0/0:38:1:1:0:10:10%:11:5E-1:39:9:4:5:10 0/0:0:0:0:0:34:0%:62:1E0:38:34:23:11:38 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 0/0:0:0:0:0:17:0%:33:1E0:38:17:12:5:20 0/0:0:0:0:0:12:0%:21:1E0:38:12:10:2:13 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:22:0%:40:1E0:39:22:15:7:24 0/0:0:0:0:0:16:0%:29:1E0:41:16:7:9:18 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:22 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:18 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:12:0%:21:1E0:38:12:11:1:14 1/1:36:13:5:8:14:92.86%:64:3.7391E-7:37:1:1:0:14 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:12 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:21:0%:40:1E0:37:21:17:4:22 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:22:0%:40:1E0:38:22:16:6:23 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:24:0%:44:1E0:40:24:18:6:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:23:5:30 0/0:0:0:0:0:35:0%:67:1E0:39:35:22:13:37 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:38 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:26 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:38:1:1:0:27:3.7%:41:5E-1:38:26:18:8:29 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:15 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:15 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:18:0%:32:1E0:40:18:13:5:21 1/1:41:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:23:0%:44:1E0:38:23:17:6:24 0/0:38:1:1:0:29:3.45%:45:5E-1:40:28:16:12:31 0/0:37:1:1:0:22:4.55%:31:5E-1:40:21:15:6:24 0/0:0:0:0:0:7:0%:14:1E0:41:7:5:2:8 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:20:0%:36:1E0:38:20:16:4:23 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:21 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:36 0/0:0:0:0:0:17:0%:33:1E0:38:17:15:2:19 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:29 0/0:0:0:0:0:24:0%:44:1E0:38:24:17:7:28 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 0/0:0:0:0:0:18:0%:32:1E0:37:18:13:5:19 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:18 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:11:0%:22:1E0:39:11:10:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:1:0:1:20:5%:27:5E-1:39:19:13:6:21 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 0/0:0:0:0:0:8:0%:14:1E0:40:8:5:3:8 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:17:0%:33:1E0:38:17:12:5:19 0/0:0:0:0:0:16:0%:29:1E0:38:16:13:3:18 0/0:0:0:0:0:13:0%:25:1E0:40:13:4:9:15 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:9:3:14 0/0:0:0:0:0:19:0%:37:1E0:36:19:10:9:20 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:14:0%:25:1E0:39:14:9:5:14 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:13:0%:25:1E0:39:13:10:3:13 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:12:0%:21:1E0:39:12:8:4:12 0/0:0:0:0:0:39:0%:74:1E0:37:39:24:15:41 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:31 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:17 1/1:38:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:15:11:4:16:93.75%:75:2.8282E-8:60:1:0:1:16 1/1:40:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:38:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:39:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:22 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:42:0%:77:1E0:38:42:32:10:47 0/0:0:0:0:0:25:0%:48:1E0:36:25:21:4:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:23:5:29 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:24:19:5:25:96%:99:2.0568E-13:37:1:1:0:26 1/1:41:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 0/0:34:1:0:1:42:2.38%:62:5E-1:38:39:26:13:43 0/0:38:1:0:1:23:4.35%:34:5E-1:37:22:19:3:25 MTB_anc 2305295 . G C . PASS AC=296;AF=1.00;AN=296;ANN=C|synonymous_variant|LOW|pks12_Rv2048c|gene2086|transcript|Transcript_gene2086|Coding|1/1|c.1692C>G|p.Gly564Gly|1692/12456|1692/12456|564/4151||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2305295G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2305295G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:15:8:7:16:93.75%:75:2.8282E-8:39:1:1:0:18 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:10:7:3:11:90.91%:47:1.7011E-5:32:1:1:0:12 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:35:19:16:36:97.22%:99:8.3613E-20:36:1:0:1:36 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:37:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:8:5:14:92.86%:64:3.7391E-7:36:1:1:0:14 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:23:11:12:23:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:24:20:4:25:96%:99:3.101E-14:0:0:0:0:25 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:29:23:6:30:96.67%:99:2.6212E-16:37:1:1:0:31 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:38:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:27:15:12:28:96.43%:99:3.7915E-15:37:1:0:1:28 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:14:12:2:15:93.33%:69:1.0315E-7:38:1:1:0:15 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:24:20:4:24:100%:99:3.101E-14:0:0:0:0:27 1/1:35:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:24:20:4:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 MTB_anc 2307504 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv2049c_Rv2049c|gene2088|transcript|Transcript_gene2088|Coding|1/1|c.14G>C|p.Gly5Ala|14/225|14/225|5/74||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2307504C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2307504C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:37:43:14:29:43 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:37:33:10:23:33 0/0:0:0:0:0:23:0%:44:1E0:35:23:10:13:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:22 0/0:0:0:0:0:19:0%:37:1E0:35:19:5:14:19 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:27 0/0:0:0:0:0:15:0%:29:1E0:35:15:4:11:15 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:38:33:12:21:33 0/0:0:0:0:0:22:0%:40:1E0:37:22:3:19:22 0/0:0:0:0:0:29:0%:55:1E0:35:29:10:19:29 0/0:0:0:0:0:7:0%:14:1E0:37:7:5:2:7 0/0:0:0:0:0:33:0%:63:1E0:36:33:18:15:35 0/0:0:0:0:0:26:0%:47:1E0:35:26:9:17:28 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 0/0:0:0:0:0:16:0%:29:1E0:40:16:4:12:16 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:16 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:28 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:17 0/0:0:0:0:0:35:0%:67:1E0:35:35:17:18:36 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:26 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:34 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:16 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:18 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:22 0/0:0:0:0:0:20:0%:36:1E0:35:20:7:13:23 0/0:0:0:0:0:25:0%:44:1E0:39:24:9:15:26 0/0:0:0:0:0:28:0%:51:1E0:35:28:11:17:31 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:32 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:26 0/0:0:0:0:0:24:0%:44:1E0:36:24:9:15:24 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:26 0/0:0:0:0:0:32:0%:59:1E0:37:32:11:21:33 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:19 0/0:0:0:0:0:48:0%:89:1E0:37:48:27:21:50 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:33 0/0:0:0:0:0:24:0%:44:1E0:35:24:8:16:26 0/0:0:0:0:0:37:0%:70:1E0:37:37:15:22:39 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:22 0/0:0:0:0:0:32:0%:59:1E0:37:32:11:21:32 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:26 0/0:0:0:0:0:32:0%:59:1E0:37:32:11:21:33 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:22 0/0:0:0:0:0:41:0%:78:1E0:36:41:17:24:44 0/0:0:0:0:0:39:0%:74:1E0:37:39:17:22:42 0/0:0:0:0:0:23:0%:44:1E0:36:23:8:15:25 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 0/0:0:0:0:0:37:0%:70:1E0:36:37:16:21:39 0/0:0:0:0:0:23:0%:44:1E0:36:23:15:8:24 0/0:0:0:0:0:20:0%:36:1E0:36:20:7:13:20 0/0:0:0:0:0:26:0%:47:1E0:35:26:11:15:27 0/0:0:0:0:0:38:0%:70:1E0:38:38:10:28:38 0/0:0:0:0:0:33:0%:63:1E0:37:33:12:21:34 0/0:0:0:0:0:27:0%:52:1E0:36:27:10:17:28 0/0:0:0:0:0:22:0%:40:1E0:38:22:3:19:24 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:26 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:20 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:27 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:18 0/0:0:0:0:0:30:0%:55:1E0:37:30:12:18:30 0/0:0:0:0:0:46:0%:85:1E0:36:46:19:27:47 0/0:0:0:0:0:19:0%:37:1E0:35:19:8:11:19 0/0:0:0:0:0:50:0%:92:1E0:37:50:25:25:50 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:14:0%:25:1E0:39:14:6:8:15 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:40 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:22 0/0:0:0:0:0:14:0%:25:1E0:35:14:5:9:15 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:43:0%:82:1E0:36:43:16:27:46 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:26 0/0:0:0:0:0:38:0%:70:1E0:36:38:14:24:41 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:27 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:27 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:31 0/0:0:0:0:0:50:0%:92:1E0:37:50:21:29:55 0/0:0:0:0:0:24:0%:44:1E0:37:24:7:17:25 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:20 0/0:0:0:0:0:36:0%:66:1E0:36:36:19:17:38 0/0:0:0:0:0:29:0%:55:1E0:36:29:9:20:32 0/0:0:0:0:0:24:0%:44:1E0:36:24:9:15:25 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:19 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:24 0/0:0:0:0:0:23:0%:44:1E0:38:23:7:16:25 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:23 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:36 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:20 0/0:0:0:0:0:41:0%:78:1E0:37:41:12:29:43 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:21 0/0:0:0:0:0:15:0%:29:1E0:35:15:1:14:16 0/0:0:0:0:0:21:0%:40:1E0:35:21:10:11:22 0/0:0:0:0:0:32:0%:59:1E0:35:32:14:18:33 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:24 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:17 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:32 0/0:0:0:0:0:21:0%:40:1E0:36:21:4:17:21 0/0:0:0:0:0:19:0%:37:1E0:36:19:3:16:20 0/0:0:0:0:0:11:0%:22:1E0:34:11:3:8:12 0/0:0:0:0:0:22:0%:40:1E0:35:22:12:10:22 0/0:0:0:0:0:16:0%:29:1E0:39:16:3:13:17 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:15 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:22 0/0:0:0:0:0:35:0%:67:1E0:37:35:15:20:36 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:21 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:21 0/0:0:0:0:0:16:0%:29:1E0:34:16:7:9:16 0/0:0:0:0:0:35:0%:67:1E0:35:35:16:19:35 0/0:0:0:0:0:31:0%:59:1E0:36:31:4:27:35 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:20 1/1:35:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:28:0%:51:1E0:35:28:13:15:30 0/0:0:0:0:0:22:0%:40:1E0:36:22:7:15:23 0/0:0:0:0:0:41:0%:78:1E0:36:41:15:26:41 0/0:0:0:0:0:40:0%:74:1E0:36:40:10:30:43 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:24 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:15 0/0:0:0:0:0:26:0%:47:1E0:35:26:7:19:27 0/0:0:0:0:0:23:0%:44:1E0:36:23:4:19:23 0/0:0:0:0:0:25:0%:48:1E0:35:25:10:15:26 0/0:0:0:0:0:33:0%:63:1E0:36:33:4:29:35 0/0:0:0:0:0:29:0%:55:1E0:36:29:6:23:30 0/0:0:0:0:0:31:0%:59:1E0:36:31:8:23:33 0/0:0:0:0:0:25:0%:48:1E0:35:25:10:15:27 0/0:0:0:0:0:19:0%:37:1E0:35:19:5:14:21 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:22 0/0:0:0:0:0:21:0%:40:1E0:35:21:7:14:25 0/0:0:0:0:0:29:0%:55:1E0:35:29:8:21:30 0/0:0:0:0:0:27:0%:52:1E0:36:27:7:20:27 0/0:0:0:0:0:17:0%:33:1E0:36:17:4:13:18 0/0:0:0:0:0:35:0%:67:1E0:35:35:9:26:35 0/0:0:0:0:0:33:0%:63:1E0:37:33:8:25:35 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:21 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:27 0/0:0:0:0:0:17:0%:33:1E0:36:17:8:9:18 0/0:0:0:0:0:23:0%:44:1E0:36:23:8:15:23 0/0:0:0:0:0:29:0%:55:1E0:37:29:9:20:33 0/0:0:0:0:0:28:0%:51:1E0:36:28:13:15:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:37:34:11:23:34 0/0:0:0:0:0:37:0%:70:1E0:36:37:17:20:39 0/0:0:0:0:0:42:0%:77:1E0:36:42:13:29:44 0/0:0:0:0:0:24:0%:44:1E0:35:24:7:17:25 MTB_anc 2307701 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv2049c_Rv2049c-Rv2050_Rv2050|gene2088-gene2089|intergenic_region|gene2088-gene2089|||n.2307701G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:12:34:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:48:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:25:13:12:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:45:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:41:17:24:42:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:50:18:32:51:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:57:18:39:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:50:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:52:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:24:10:14:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:47:12:35:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:8:28:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:53:18:35:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:48:16:32:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:51:12:39:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:35:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:49:14:35:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:60:25:35:60:100%:99:1.035E-35:0:0:0:0:61 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 2309384 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|ppm1_Rv2051c|gene2090|transcript|Transcript_gene2090|Coding|1/1|c.1372G>A|p.Asp458Asn|1372/2625|1372/2625|458/874||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.2309384C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2309384C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:8:0%:14:1E0:57:8:4:4:8 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:48 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:19 0/0:0:0:0:0:31:0%:59:1E0:51:31:16:15:32 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:38 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:19 0/0:0:0:0:0:49:0%:93:1E0:46:49:20:29:50 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:17:0%:33:1E0:47:17:12:5:18 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:28 0/0:0:0:0:0:71:0%:99:1E0:42:71:42:29:73 0/0:0:0:0:0:24:0%:44:1E0:53:24:16:8:25 0/0:0:0:0:0:28:0%:51:1E0:51:28:9:19:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:36 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:49:34:17:17:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:50:35:18:17:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:40:0%:74:1E0:51:40:28:12:41 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:60:1:1:0:72:1.39%:99:5E-1:49:71:41:30:73 0/0:0:0:0:0:51:0%:97:1E0:46:51:24:27:51 0/0:0:0:0:0:42:0%:77:1E0:46:42:26:16:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:52:0%:96:1E0:43:52:22:30:52 0/0:0:0:0:0:39:0%:74:1E0:47:39:23:16:39 0/0:0:0:0:0:22:0%:40:1E0:52:22:11:11:23 0/0:0:0:0:0:51:0%:97:1E0:43:51:30:21:51 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:29 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:47 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:47 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:32:1:1:0:44:2.27%:69:5E-1:44:43:26:17:44 0/0:0:0:0:0:37:0%:70:1E0:49:37:13:24:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:25:18:43 0/0:0:0:0:0:36:0%:66:1E0:47:36:26:10:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:48:0%:89:1E0:48:48:29:19:48 0/0:0:0:0:0:60:0%:99:1E0:46:60:27:33:60 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:24 0/0:0:0:0:0:43:0%:82:1E0:45:43:15:28:44 0/0:0:0:0:0:18:0%:32:1E0:54:18:10:8:18 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:48:0%:89:1E0:43:48:22:26:48 0/1:50:20:10:10:24:83.33%:91:6.3493E-10:60:4:4:0:24 0/0:0:0:0:0:20:0%:36:1E0:52:20:12:8:20 0/0:0:0:0:0:34:0%:62:1E0:50:34:19:15:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:24:0%:44:1E0:51:24:12:12:25 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:42 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:25:10:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:51:0%:97:1E0:44:51:25:26:51 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:37 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:29 0/0:0:0:0:0:40:0%:74:1E0:49:40:17:23:40 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:49 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:51:29:17:12:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:44 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:34 0/0:0:0:0:0:47:0%:89:1E0:44:47:29:18:48 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:35 0/0:0:0:0:0:68:0%:99:1E0:43:68:28:40:68 0/0:0:0:0:0:60:0%:99:1E0:42:60:25:35:60 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:54:0%:99:1E0:40:54:23:31:55 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:55:0%:99:1E0:40:55:30:25:56 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:42 0/0:0:0:0:0:47:0%:89:1E0:42:47:19:28:48 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:37 0/0:0:0:0:0:43:0%:82:1E0:41:43:15:28:44 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:43:0%:82:1E0:40:43:18:25:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:38 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:43 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:35 0/0:60:1:0:1:46:2.17%:73:5E-1:43:45:23:22:46 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:45 0/0:0:0:0:0:44:0%:81:1E0:43:44:15:29:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:52 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:51 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:46 MTB_anc 2313821 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv2054_Rv2054|gene2093|transcript|Transcript_gene2093|Coding|1/1|c.697T>G|p.Ser233Ala|697/714|697/714|233/237||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2313821T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2313821T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:44 0/0:0:0:0:0:18:0%:32:1E0:52:18:8:10:18 0/0:0:0:0:0:51:0%:97:1E0:47:51:29:22:54 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:29 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:25 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:32 0/0:0:0:0:0:45:0%:85:1E0:46:45:22:23:46 0/0:0:0:0:0:13:0%:25:1E0:49:13:9:4:13 0/0:0:0:0:0:50:0%:92:1E0:46:50:32:18:52 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:27 0/0:0:0:0:0:59:0%:99:1E0:43:59:32:27:60 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:21 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:31:0%:59:1E0:48:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:22:0%:40:1E0:50:22:14:8:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:26 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:66:0%:99:1E0:45:66:32:34:68 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:41 0/0:0:0:0:0:29:0%:55:1E0:43:29:7:22:30 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:47 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:21 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:41 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:52:0%:96:1E0:44:52:30:22:52 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:37 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:21 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:38:1:0:1:25:4%:38:5E-1:42:24:13:11:26 0/0:0:0:0:0:47:0%:89:1E0:42:47:29:18:49 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:47 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:38 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:28 0/0:0:0:0:0:55:0%:99:1E0:45:55:32:23:58 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:31 0/0:0:0:0:0:9:0%:18:1E0:44:9:6:3:9 0/0:0:0:0:0:22:0%:40:1E0:47:22:7:15:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:50:30:9:21:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:19 0/0:0:0:0:0:37:0%:70:1E0:49:37:24:13:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:22 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:27 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:46 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:22 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:20:0%:36:1E0:46:20:14:6:21 0/0:0:0:0:0:33:0%:63:1E0:53:33:15:18:33 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:23 0/0:0:0:0:0:35:0%:67:1E0:51:35:19:16:35 0/0:0:0:0:0:30:0%:55:1E0:53:30:13:17:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:41 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:33 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:6:20:27 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:34 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:33 0/0:0:0:0:0:14:0%:25:1E0:43:14:9:5:17 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:23:0%:44:1E0:38:23:6:17:23 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:24 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:46 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:58:0%:99:1E0:43:58:25:33:59 0/0:0:0:0:0:58:0%:99:1E0:42:58:29:29:59 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:35 0/0:0:0:0:0:46:0%:85:1E0:38:46:21:25:48 0/0:0:0:0:0:41:0%:78:1E0:37:41:17:24:43 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:44 0/0:0:0:0:0:51:0%:97:1E0:37:51:27:24:54 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:49 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:44 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:48 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:42 0/0:0:0:0:0:47:0%:89:1E0:38:47:27:20:50 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:55:0%:99:1E0:39:55:27:28:56 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:40 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:35 1/1:41:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:16 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:50:0%:92:1E0:46:50:30:20:50 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:44 MTB_anc 2322383 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|cobG_Rv2064|gene2104|transcript|Transcript_gene2104|Coding|1/1|c.933G>A|p.Ala311Ala|933/1092|933/1092|311/363||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2322383G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2322383G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:36 0/0:0:0:0:0:13:0%:25:1E0:43:13:7:6:13 0/0:0:0:0:0:36:0%:66:1E0:45:36:27:9:37 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:23 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:22 0/0:0:0:0:0:13:0%:25:1E0:45:13:6:7:14 0/0:0:0:0:0:25:0%:48:1E0:50:25:17:8:27 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:20 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:19 0/0:0:0:0:0:26:0%:47:1E0:45:26:19:7:26 0/0:0:0:0:0:12:0%:21:1E0:52:12:3:9:13 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:30 0/0:0:0:0:0:8:0%:14:1E0:44:8:3:5:9 0/0:0:0:0:0:25:0%:48:1E0:42:25:18:7:28 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:26 0/0:0:0:0:0:22:0%:40:1E0:46:22:16:6:24 0/0:0:0:0:0:8:0%:14:1E0:43:8:4:4:10 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:22 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:40 0/0:0:0:0:0:20:0%:36:1E0:45:20:15:5:20 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:25 0/0:0:0:0:0:14:0%:25:1E0:52:14:11:3:15 0/0:0:0:0:0:13:0%:25:1E0:47:13:7:6:13 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:23:0%:44:1E0:47:23:16:7:23 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:22 0/0:0:0:0:0:23:0%:44:1E0:44:23:16:7:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:49:0%:93:1E0:47:49:35:14:49 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:38 0/0:0:0:0:0:30:0%:55:1E0:39:30:21:9:32 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:40 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:30 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:16 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:44 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:20:0%:36:1E0:49:20:14:6:20 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:33 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:20 0/0:0:0:0:0:26:0%:47:1E0:46:26:4:22:27 0/0:0:0:0:0:18:0%:32:1E0:40:18:6:12:18 0/0:0:0:0:0:38:0%:70:1E0:41:38:26:12:38 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:35 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:45:32:22:10:35 0/0:0:0:0:0:20:0%:36:1E0:46:20:14:6:21 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:29:10:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:23:12:40 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:11:0%:22:1E0:41:11:6:5:11 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:30 0/0:29:1:1:0:23:4.35%:34:5E-1:44:22:15:7:23 0/0:0:0:0:0:17:0%:33:1E0:52:17:8:9:17 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:35:0%:67:1E0:38:35:14:21:36 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:18 0/0:0:0:0:0:31:0%:59:1E0:38:31:19:12:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:24:9:35 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:23 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:15:0%:29:1E0:50:15:10:5:15 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:22:0%:40:1E0:46:22:15:7:22 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:24 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:48 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:17:0%:33:1E0:40:17:1:16:19 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:29 0/0:0:0:0:0:16:0%:29:1E0:36:16:12:4:17 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:8:16:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:27 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:20 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:18 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:21 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:38:40:14:26:42 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:20 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:50 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:17 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:14 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:29 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:34 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:24 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:31 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:30 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:21 0/0:0:0:0:0:38:0%:70:1E0:38:38:17:21:40 0/0:0:0:0:0:17:0%:33:1E0:39:17:10:7:17 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:27 0/0:0:0:0:0:53:0%:99:1E0:37:53:29:24:54 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:17:0%:33:1E0:42:17:10:7:18 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:31 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:53:0%:99:1E0:39:53:31:22:56 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 MTB_anc 2325009 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2067c_Rv2067c|gene2107|transcript|Transcript_gene2107|Coding|1/1|c.862G>A|p.Glu288Lys|862/1224|862/1224|288/407||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2325009C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2325009C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:55:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:63:35:28:64:100%:99:1.657E-37:0:0:0:0:64 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:52:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:34:11:23:35:97.14%:99:3.2089E-19:38:1:0:1:35 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:13:10:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:60:37:23:60:100%:99:1.035E-35:0:0:0:0:62 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:49:17:32:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:50:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:23:10:13:23:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:49:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:26:9:17:27:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:38:29:9:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:55:30:25:56:98.21%:99:1.4593E-31:34:1:1:0:56 1/1:42:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:60:23:37:60:100%:99:1.035E-35:0:0:0:0:62 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:41:21:20:42:97.62%:99:2.5612E-23:39:1:1:0:42 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:37:16:21:38:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:41:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:63:23:40:63:100%:99:1.657E-37:0:0:0:0:65 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 2328543 . C T . PASS AC=298;AF=1.00;AN=298;ANN=T|missense_variant|MODERATE|cobM_Rv2071c|gene2111|transcript|Transcript_gene2111|Coding|1/1|c.435G>A|p.Met145Ile|435/756|435/756|145/251||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2328543C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2328543C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:46:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:35:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:40:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 MTB_anc 2330284 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|stop_gained|HIGH|Rv2073c_Rv2073c|gene2113|transcript|Transcript_gene2113|Coding|1/1|c.680G>A|p.Trp227*|680/750|680/750|227/249||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2330284C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2330284C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:45 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:22 0/0:0:0:0:0:45:0%:85:1E0:47:45:23:22:46 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:20 0/0:0:0:0:0:18:0%:32:1E0:51:18:9:9:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:25 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:28 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:20 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:35 0/0:0:0:0:0:7:0%:14:1E0:43:7:5:2:7 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:55 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:27 0/0:0:0:0:0:13:0%:25:1E0:47:13:5:8:15 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:12:0%:21:1E0:47:12:5:7:12 0/0:0:0:0:0:19:0%:37:1E0:45:19:5:14:19 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:40 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:48 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:22 0/0:60:1:0:1:30:3.33%:44:5E-1:46:29:15:14:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:41 0/0:0:0:0:0:31:0%:59:1E0:51:31:15:16:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:49:0%:93:1E0:47:49:26:23:50 0/1:43:38:16:22:43:88.37%:99:2.5797E-19:46:5:4:1:43 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:30 0/0:37:1:0:1:30:3.33%:44:5E-1:46:29:14:15:31 0/0:39:1:0:1:35:2.86%:55:5E-1:42:34:21:13:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:34 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:47 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:36 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:20 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:35 0/0:0:0:0:0:19:0%:37:1E0:51:19:6:13:19 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:40 0/0:60:1:0:1:37:2.7%:59:5E-1:42:36:18:18:38 0/0:50:1:0:1:19:5.26%:28:5E-1:41:18:9:9:21 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:49:34:22:12:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:30 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:31 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:35 0/0:0:0:0:0:40:0%:74:1E0:48:40:20:20:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:28 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:52 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:18 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:29:0%:55:1E0:49:29:11:18:29 0/0:0:0:0:0:30:0%:55:1E0:51:30:13:17:31 0/0:0:0:0:0:18:0%:32:1E0:48:18:12:6:19 0/0:60:1:0:1:32:3.12%:48:5E-1:49:31:15:16:34 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:32 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:42 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:38 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:24 0/0:0:0:0:0:11:0%:22:1E0:47:11:5:6:13 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:34 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:18 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:31 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:21 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:47 0/0:39:1:0:1:25:4%:38:5E-1:40:24:12:12:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:19 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:24 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:19 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:43 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:17 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:30 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:22 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:25 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:27 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:24:16:43 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:53:0%:99:1E0:41:53:32:21:53 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:21 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:38:38:24:14:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:44 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:46 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:33 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:23 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:38 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:38 0/0:0:0:0:0:37:0%:70:1E0:38:37:11:26:40 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:32 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:6:16:24 0/0:0:0:0:0:45:0%:85:1E0:38:45:23:22:49 0/0:60:1:1:0:38:2.63%:58:5E-1:41:37:20:17:41 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:44 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:34 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:19 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:46 0/0:0:0:0:0:51:0%:97:1E0:42:51:31:20:53 0/0:0:0:0:0:42:0%:77:1E0:40:42:27:15:46 MTB_anc 2331620 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2075c_Rv2075c|gene2115|transcript|Transcript_gene2115|Coding|1/1|c.1260G>T|p.Gly420Gly|1260/1464|1260/1464|420/487||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2331620C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2331620C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:45:12:33:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:24:6:18:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:11:18:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:34:14:20:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:49:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:23:10:13:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:44:8:36:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:62:19:43:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:36:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:49:15:34:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 2331789 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2075c_Rv2075c|gene2115|transcript|Transcript_gene2115|Coding|1/1|c.1091A>C|p.Gln364Pro|1091/1464|1091/1464|364/487||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2331789T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2331789T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:29:15:14:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:50:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:34:18:16:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:48:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:53:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:53:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:31:19:12:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:53:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:49 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:61:31:30:61:100%:99:2.609E-36:0:0:0:0:63 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 2338194 . A AC . PASS AC=2;AF=6.667e-03;AN=300;ANN=AC|frameshift_variant|HIGH|Rv2081c_Rv2081c|gene2122|transcript|Transcript_gene2122|Coding|1/1|c.311dupG|p.Val105fs|311/441|311/441|104/146||,AC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2338194_2338195insC||||||,AC|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2338194_2338195insC||||||;HOM=0;LOF=(Rv2081c_Rv2081c|gene2122|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:2:2:0:37:5.41%:50:2.4658E-1:38:35:26:9:39 0/0:0:0:0:0:19:0%:37:1E0:43:19:15:4:19 0/0:0:0:0:0:43:0%:82:1E0:42:43:29:14:44 0/0:31:1:0:1:17:5.88%:24:5E-1:37:16:11:5:18 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:20 0/0:0:0:0:0:21:0%:40:1E0:38:21:17:4:21 0/0:34:1:1:0:32:3.12%:48:5E-1:41:31:15:16:32 0/0:0:0:0:0:18:0%:32:1E0:33:18:10:8:19 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:16:0%:29:1E0:39:16:11:5:19 0/0:33:1:0:1:17:5.88%:24:5E-1:39:16:10:6:19 0/0:34:1:1:0:25:4%:38:5E-1:41:24:15:9:26 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:38:0%:70:1E0:41:38:25:13:40 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:18 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:31 0/0:0:0:0:0:18:0%:32:1E0:35:18:13:5:20 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:19 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 0/0:60:1:1:0:27:3.7%:41:5E-1:41:26:16:10:28 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:34 0/0:37:1:1:0:40:2.5%:62:5E-1:41:38:27:11:40 0/0:36:1:1:0:19:5.26%:28:5E-1:45:18:12:6:20 0/0:37:1:0:1:18:5.56%:24:5E-1:36:17:12:5:20 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:25 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:23 0/0:38:1:1:0:19:5.26%:24:5E-1:41:17:10:7:21 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:19 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:19 0/0:33:1:0:1:24:4.17%:34:5E-1:37:23:18:5:26 0/0:0:0:0:0:22:0%:40:1E0:38:22:18:4:23 0/0:60:1:0:1:28:3.57%:41:5E-1:41:26:18:8:29 0/0:0:0:0:0:14:0%:25:1E0:39:14:11:3:15 0/0:36:1:1:0:19:5.26%:28:5E-1:43:18:11:7:19 0/0:0:0:0:0:28:0%:51:1E0:39:28:19:9:30 0/0:45:4:2:2:28:14.29%:23:5.5746E-2:42:24:16:8:28 0/0:38:1:1:0:39:2.56%:62:5E-1:38:38:25:13:41 0/0:0:0:0:0:34:0%:62:1E0:39:34:25:9:36 0/0:32:1:1:0:35:2.86%:55:5E-1:41:34:24:10:36 0/0:38:1:1:0:28:3.57%:41:5E-1:40:27:18:9:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:17:7:26 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:25 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:29 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:34 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:36 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:21 0/0:34:1:0:1:35:2.86%:55:5E-1:37:34:22:12:36 0/0:38:1:1:0:34:2.94%:51:5E-1:37:33:23:10:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:29 0/0:37:1:0:1:18:5.56%:24:5E-1:42:17:9:8:18 0/0:38:1:1:0:41:2.44%:66:5E-1:40:40:30:10:43 0/0:38:1:1:0:28:3.57%:41:5E-1:41:27:20:7:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:28 0/0:0:0:0:0:22:0%:40:1E0:38:22:15:7:22 0/0:0:0:0:0:39:0%:74:1E0:39:39:32:7:42 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:20:8:31 0/0:38:1:0:1:26:3.85%:38:5E-1:42:25:12:13:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:18:8:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:17:9:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:16:5:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:26:5:32 0/0:26:1:0:1:45:2.22%:73:5E-1:38:44:28:16:45 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:27 0/0:60:1:0:1:32:3.12%:48:5E-1:40:31:23:8:38 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:37:1:1:0:20:5%:27:5E-1:41:19:14:5:20 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:9:0%:18:1E0:36:9:7:2:11 0/0:26:1:0:1:24:4.17%:34:5E-1:38:23:12:11:24 0/0:38:1:1:0:37:2.7%:59:5E-1:39:36:29:7:42 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:22 0/0:60:1:1:0:24:4.17%:34:5E-1:36:23:15:8:24 0/0:37:1:1:0:21:4.76%:31:5E-1:40:20:13:7:21 0/0:32:1:1:0:28:3.57%:41:5E-1:38:27:18:9:29 0/0:47:2:2:0:31:6.45%:40:2.459E-1:37:29:18:11:34 0/0:0:0:0:0:21:0%:40:1E0:36:21:15:6:22 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:40 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:27 0/0:60:1:1:0:26:3.85%:38:5E-1:40:25:17:8:30 0/0:0:0:0:0:25:0%:48:1E0:36:25:20:5:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:20:10:32 0/0:38:1:1:0:33:3.03%:52:5E-1:40:32:21:11:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:22:8:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:19:8:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:35:0%:67:1E0:38:35:21:14:36 0/0:37:1:1:0:29:3.45%:45:5E-1:39:28:19:9:30 0/0:0:0:0:0:44:0%:81:1E0:40:44:32:12:47 0/0:0:0:0:0:21:0%:40:1E0:39:21:16:5:21 0/0:0:0:0:0:14:0%:25:1E0:38:14:10:4:16 0/0:31:1:0:1:25:4%:38:5E-1:41:24:18:6:26 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:25 0/0:0:0:0:0:24:0%:44:1E0:38:24:16:8:27 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:18 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:30 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:28 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:13 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:14 0/0:0:0:0:0:29:0%:55:1E0:38:29:21:8:31 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:22 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:34 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:34 0/0:38:1:1:0:33:3.03%:48:5E-1:38:31:21:10:34 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:18 0/0:37:1:0:1:17:5.88%:24:5E-1:39:16:8:8:17 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:23 0/0:0:0:0:0:23:0%:44:1E0:36:23:14:9:24 0/0:37:1:0:1:20:5%:28:5E-1:39:18:13:5:21 0/0:0:0:0:0:16:0%:29:1E0:35:16:11:5:18 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:25 0/0:34:2:2:0:29:6.9%:37:2.4561E-1:39:27:19:8:31 0/1:35:15:7:8:24:62.5%:59:1.196E-6:34:9:8:1:25 0/1:43:25:13:12:27:89.29%:99:5.8768E-13:32:3:2:1:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:27:9:38 0/0:37:1:1:0:18:5.56%:24:5E-1:38:17:11:6:18 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:21 0/0:29:1:0:1:30:3.33%:44:5E-1:38:29:17:12:30 0/0:60:1:1:0:27:3.7%:41:5E-1:37:26:17:9:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:33 0/0:37:1:0:1:26:3.85%:38:5E-1:36:25:12:13:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:33 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:21 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:26 0/0:0:0:0:0:12:0%:21:1E0:37:12:10:2:13 0/0:0:0:0:0:14:0%:25:1E0:40:14:5:9:17 0/0:0:0:0:0:25:0%:48:1E0:36:25:16:9:28 0/0:0:0:0:0:18:0%:32:1E0:36:18:13:5:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:15:7:23 0/0:38:1:1:0:31:3.23%:48:5E-1:41:30:20:10:33 0/0:37:1:1:0:51:1.96%:84:5E-1:36:50:30:20:53 0/0:0:0:0:0:24:0%:44:1E0:42:24:18:6:27 0/0:0:0:0:0:18:0%:32:1E0:36:18:10:8:19 0/0:0:0:0:0:43:0%:82:1E0:38:43:31:12:43 0/0:0:0:0:0:23:0%:44:1E0:42:23:18:5:23 0/0:0:0:0:0:26:0%:47:1E0:37:26:18:8:29 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:20 0/0:0:0:0:0:30:0%:55:1E0:39:30:25:5:33 0/0:0:0:0:0:25:0%:48:1E0:35:25:15:10:28 0/0:38:1:1:0:19:5.26%:28:5E-1:39:18:10:8:20 0/0:0:0:0:0:29:0%:55:1E0:37:29:19:10:33 0/0:54:2:1:1:43:4.65%:60:2.4706E-1:40:41:26:15:44 0/0:34:1:1:0:40:2.5%:62:5E-1:41:39:24:15:43 0/0:36:1:1:0:27:3.7%:41:5E-1:37:26:19:7:27 MTB_anc 2338866 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.158G>T|p.Arg53Leu|158/2166|158/2166|53/721||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2338866G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2338866G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:60:29:31:60:100%:99:1.035E-35:0:0:0:0:61 1/1:48:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:44:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:60:27:33:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2338912 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.204C>A|p.Arg68Arg|204/2166|204/2166|68/721||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2338912C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2338912C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:75:41:34:75:100%:99:1.0773E-44:0:0:0:0:76 1/1:46:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:69:30:39:69:100%:99:4.233E-41:0:0:0:0:69 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:53:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:55:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:52 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:15:21:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:51 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:41 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:46:21:25:47:97.87%:99:2.4343E-27:0:0:0:0:48 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 2338990 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.282C>G|p.Ala94Ala|282/2166|282/2166|94/721||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2338990C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2338990C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:53:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:48:24:12:12:25:96%:99:3.101E-14:0:0:0:0:26 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:72:42:30:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:46:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:54:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:48:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:51:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:20:8:12:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:46:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:47:21:26:49:95.92%:99:6.1512E-28:0:0:0:0:49 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:61:28:33:61:100%:99:2.609E-36:0:0:0:0:62 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2338994 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.286A>G|p.Thr96Ala|286/2166|286/2166|96/721||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2338994A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2338994A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:53:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:31:15:16:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:48:29:19:10:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:53:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:70:40:30:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:45:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:51:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:20:8:12:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:36:23:13:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:50:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:30:16:14:31:96.77%:99:8.4556E-18:0:0:0:0:32 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:30:19:11:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2339524 . G A . PASS AC=2;AF=1.00;AN=2;ANN=A|synonymous_variant|LOW|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.816G>A|p.Pro272Pro|816/2166|816/2166|272/721||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2339524G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2339524G>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 2339525 . G T . PASS AC=6;AF=1.00;AN=6;ANN=T|missense_variant|MODERATE|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.817G>T|p.Gly273Cys|817/2166|817/2166|273/721||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2339525G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2339525G>T||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 2339605 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.897A>G|p.Pro299Pro|897/2166|897/2166|299/721||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2339605A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2339605A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:14:8:6:15:93.33%:69:1.0315E-7:60:1:1:0:15 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:39:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:18:9:9:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:39:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:42:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:27:9:18:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:38:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:28:4:24:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:29:3:26:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:23:2:21:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:24:4:20:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:26:3:23:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:23:4:19:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:34:5:29:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 MTB_anc 2339608 . AGCAGCG A . PASS AC=299;AF=0.997;AN=300;ANN=A|disruptive_inframe_deletion|MODERATE|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.903_908delAGCGGC|p.Ala302_Ala303del|903/2166|903/2166|301/721||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2339609_2339614delGCAGCG||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2339609_2339614delGCAGCG||||||;NC=0;WT=0;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:12:7:5:11:100%:64:3.698E-7:0:0:0:0:12 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:34:13:5:8:13:92.86%:64:3.7391E-7:38:1:1:0:14 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:18:4:14:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:24:8:16:23:100%:99:3.101E-14:0:0:0:0:24 1/1:38:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:17:5:12:14:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:23:9:14:23:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:40:23:4:19:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:21:5:16:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:14:8:6:15:93.33%:69:1.0315E-7:60:1:1:0:15 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:28:9:19:28:96.55%:99:9.9776E-16:33:1:0:1:29 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:23:10:13:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:18:7:11:19:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:25:6:19:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:17:5:12:18:94.44%:86:2.0936E-9:32:1:0:1:18 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:18:7:11:19:90%:87:1.6758E-9:35:2:1:1:20 1/1:40:22:6:16:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:39:29:8:21:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:15:4:11:15:93.75%:75:2.8282E-8:33:1:1:0:16 1/1:37:37:13:24:35:97.37%:99:5.6582E-21:32:1:0:1:38 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:27:7:20:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:21:6:15:21:95.45%:99:1.0931E-11:33:1:0:1:22 1/1:36:26:7:19:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:22:6:16:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:17:5:12:17:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:41:30:7:23:31:96.77%:99:6.8754E-17:29:1:1:0:31 1/1:40:26:8:18:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:30:9:21:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:35:9:26:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:17:5:12:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:24:7:17:25:96%:99:2.0568E-13:32:1:0:1:25 1/1:37:19:5:14:19:95%:98:1.5234E-10:34:1:0:1:20 1/1:39:15:3:12:16:93.75%:75:2.8282E-8:34:1:1:0:16 1/1:36:14:4:10:15:93.33%:69:1.0315E-7:34:1:0:1:15 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:22:10:12:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:26:6:20:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:37:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:17:6:11:18:94.44%:86:2.0936E-9:33:1:0:1:18 1/1:38:22:9:13:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:36:35:11:24:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:32:13:3:10:11:92.86%:64:3.7391E-7:34:1:0:1:14 1/1:38:26:7:19:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:15:7:8:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:12:4:8:13:92.31%:58:1.3461E-6:33:1:0:1:13 1/1:36:21:5:16:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:16:3:13:16:94.12%:81:7.7134E-9:35:1:0:1:17 1/1:37:9:4:5:7:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:17:5:12:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:22:7:15:22:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:36:16:6:10:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:27:5:22:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:15:3:12:15:93.75%:75:2.8282E-8:34:1:0:1:16 1/1:36:24:7:17:22:100%:99:3.101E-14:0:0:0:0:24 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:30:6:24:31:96.77%:99:6.8754E-17:31:1:1:0:32 1/1:41:27:10:17:27:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:40:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:19:3:16:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:28:8:20:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:12:2:10:11:100%:64:3.698E-7:0:0:0:0:12 1/1:38:19:9:10:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:17:7:10:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:25:5:20:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:26:8:18:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:16:5:11:17:94.12%:81:7.7134E-9:33:1:0:1:17 1/1:36:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:27:10:17:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:37:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:33:22:5:17:20:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:34:14:7:7:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:18:8:10:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:38:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:26:5:21:25:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:37:24:7:17:23:100%:99:3.101E-14:0:0:0:0:24 1/1:38:18:4:14:19:94.74%:92:5.6585E-10:32:1:0:1:19 1/1:35:16:6:10:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:21:4:17:21:95.45%:99:1.0931E-11:33:1:0:1:22 1/1:36:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:24:7:17:22:100%:99:3.101E-14:0:0:0:0:24 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:23:6:17:24:92%:99:2.7767E-12:32:2:0:2:25 1/1:37:28:3:25:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:14:3:11:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:22:5:17:21:95.65%:99:2.9149E-12:32:1:0:1:24 1/1:39:22:3:19:23:95.65%:99:2.9149E-12:32:1:0:1:23 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:22:1:21:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:28:5:23:29:96.55%:99:9.9776E-16:33:1:0:1:29 0/1:37:13:1:12:15:86.67%:60:8.7675E-7:32:2:0:2:16 1/1:37:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:24:2:22:23:100%:99:3.101E-14:0:0:0:0:24 1/1:36:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:21:3:18:22:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:36:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:24:5:19:23:96%:99:2.0568E-13:34:1:0:1:25 1/1:37:35:13:22:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:22:8:14:24:91.67%:99:1.0078E-11:33:2:0:2:24 1/1:37:29:8:21:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:27:4:23:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:4:18:24:91.67%:99:1.0078E-11:29:2:1:1:24 1/1:38:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:34:18:9:9:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:25:5:20:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:14:5:9:15:93.33%:69:1.0315E-7:33:1:0:1:15 1/1:38:33:8:25:30:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:34:5:29:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:25:11:14:25:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:36:18:7:11:18:94.74%:92:5.6585E-10:34:1:0:1:19 MTB_anc 2339719 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.1011G>A|p.Ala337Ala|1011/2166|1011/2166|337/721||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2339719G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2339719G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:31:13:18:32:96.88%:99:1.8007E-17:26:1:0:1:32 1/1:41:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:20:8:12:21:95.24%:99:4.0873E-11:38:1:0:1:22 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 MTB_anc 2339726 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2082_Rv2082|gene2123|transcript|Transcript_gene2123|Coding|1/1|c.1018G>C|p.Val340Leu|1018/2166|1018/2166|340/721||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2339726G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2339726G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:23:8:15:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:40:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:12:26:39:97.44%:99:1.4508E-22:0:0:0:0:41 1/1:43:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:17:9:8:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:42:38:16:22:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:24:11:13:25:96%:99:3.101E-14:0:0:0:0:25 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:14:1:13:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:16:4:12:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 MTB_anc 2341030 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2083_Rv2083|gene2124|transcript|Transcript_gene2124|Coding|1/1|c.160A>G|p.Thr54Ala|160/945|160/945|54/314||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2341030A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2341030A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:35:20:15:36:97.22%:99:8.3613E-20:38:1:0:1:36 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:52:35:17:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:63:36:27:63:100%:99:1.657E-37:0:0:0:0:65 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:37:24:13:38:97.37%:99:5.6582E-21:38:1:0:1:38 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:25:14:11:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:45:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:65:37:28:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:47:31:16:48:97.92%:99:7.6145E-27:35:1:0:1:48 1/1:45:25:16:9:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:44:33:11:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:15:17:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:58:36:22:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:12:10:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2350186 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|helY_Rv2092c|gene2132|transcript|Transcript_gene2132|Coding|1/1|c.1869C>T|p.Arg623Arg|1869/2721|1869/2721|623/906||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2350186G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.2350186G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:27:16:11:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:67:32:35:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:16:13:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:39:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:63:33:30:63:100%:99:1.657E-37:0:0:0:0:63 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2357268 . TGCC T . PASS AC=241;AF=0.814;AN=296;ANN=T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2357269_2357271delGCC||||||,T|intragenic_variant|MODIFIER|PE_PGRS36_Rv2098c|gene2138|gene_variant|gene2138|||n.2357269_2357271delGCC||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:21:15:6:23:91.3%:99:3.6437E-11:34:2:0:2:23 0/1:50:7:4:3:8:87.5%:31:6.993E-4:60:1:0:1:8 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 0/1:43:7:6:1:9:77.78%:29:1.1312E-3:47:2:2:0:9 1/1:39:24:13:11:24:96%:99:2.0568E-13:32:1:1:0:25 1/1:45:11:6:5:11:91.67%:53:4.8074E-6:32:1:1:0:12 0/1:39:12:8:4:14:85.71%:55:2.9913E-6:46:2:0:2:14 1/1:40:19:11:8:20:95%:98:1.5234E-10:24:1:1:0:20 0/1:46:11:7:4:12:84.62%:49:1.0096E-5:36:2:0:2:13 1/1:42:16:4:12:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:22:12:10:22:95.65%:99:2.9149E-12:34:1:0:1:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:41:22:16:6:23:88%:99:2.5916E-11:34:3:0:3:25 1/1:41:19:10:9:20:90.48%:93:4.7003E-10:37:2:0:2:21 1/1:40:19:13:6:17:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:14:8:6:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:12:6:6:13:92.31%:58:1.3461E-6:26:1:1:0:13 0/1:41:7:4:3:9:77.78%:31:6.993E-4:34:1:0:1:9 1/1:44:17:8:9:17:94.44%:86:2.0936E-9:38:1:0:1:18 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:41:15:6:9:18:83.33%:68:1.4655E-7:39:3:1:2:18 1/1:46:10:5:5:10:90.91%:47:1.7011E-5:34:1:0:1:11 0/1:45:13:9:4:16:81.25%:57:1.6121E-6:36:3:3:0:17 0/1:41:26:19:7:28:89.66%:99:1.6496E-13:34:3:0:3:29 1/1:46:15:9:6:16:93.75%:75:2.8282E-8:60:1:0:1:16 0/1:41:16:10:6:18:88.89%:76:2.0936E-8:55:2:1:1:19 1/1:39:24:10:14:23:100%:99:3.101E-14:0:0:0:0:24 1/1:43:18:11:7:19:94.74%:92:5.6585E-10:38:1:0:1:19 0/1:41:21:12:9:24:84%:97:1.8789E-10:37:4:0:4:26 0/1:39:20:13:7:25:76.92%:87:1.8273E-9:34:6:0:6:26 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/1:44:18:8:10:21:85.71%:87:1.6758E-9:33:2:0:2:21 1/1:37:18:10:8:17:94.74%:92:5.6585E-10:37:1:1:0:20 1/1:41:13:9:4:14:92.86%:64:3.7391E-7:33:1:0:1:14 0/1:42:23:13:10:26:88.46%:99:7.3681E-12:36:3:1:2:27 1/1:38:14:4:10:13:100%:76:2.4927E-8:0:0:0:0:14 0/1:41:37:20:17:42:84.09%:99:2.1068E-18:38:6:2:4:44 1/1:40:21:10:11:23:91.3%:99:3.6437E-11:38:2:0:2:23 1/1:41:21:8:13:20:100%:99:1.8578E-12:0:0:0:0:21 0/1:40:16:10:6:18:88.89%:76:2.0936E-8:46:2:0:2:18 1/1:39:22:8:14:22:95.65%:99:2.9149E-12:60:1:1:0:23 0/1:38:25:14:11:28:89.29%:99:5.8768E-13:37:3:2:1:28 0/1:40:15:9:6:17:83.33%:68:1.4655E-7:35:3:1:2:18 1/1:37:32:16:16:29:96.97%:99:4.7095E-18:38:1:0:1:33 0/1:38:20:11:9:23:80%:89:1.1273E-9:35:5:3:2:25 0/1:40:24:17:7:28:82.76%:99:9.2544E-12:33:5:2:3:31 0/1:40:25:15:10:32:78.12%:99:4.9949E-12:35:6:2:4:32 1/1:36:24:11:13:23:96%:99:2.0568E-13:33:1:0:1:25 1/1:40:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 0/1:50:7:5:2:8:87.5%:31:6.993E-4:35:1:1:0:8 0/1:36:15:6:9:16:88.24%:71:7.3277E-8:46:2:1:1:17 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 0/1:44:15:10:5:17:88.24%:71:7.3277E-8:36:2:2:0:17 0/1:36:13:5:8:14:86.67%:60:8.7675E-7:35:2:2:0:15 1/1:39:28:19:9:30:90.32%:99:1.2857E-14:37:3:0:3:31 1/1:34:12:5:7:12:92.31%:58:1.3461E-6:38:1:0:1:13 1/1:39:16:9:7:16:94.12%:81:7.7134E-9:30:1:1:0:17 0/1:34:17:12:5:21:73.91%:74:3.8368E-8:41:5:1:4:23 1/1:46:29:16:13:28:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:38:19:12:7:19:95%:98:1.5234E-10:30:1:1:0:20 1/1:43:15:9:6:15:93.75%:75:2.8282E-8:37:1:1:0:16 1/1:41:16:5:11:17:94.12%:81:7.7134E-9:32:1:0:1:17 1/1:40:19:14:5:20:95%:98:1.5234E-10:34:1:0:1:20 0/1:39:25:13:12:25:89.29%:99:2.0853E-13:33:2:2:0:28 1/1:41:39:24:15:41:90.7%:99:8.4519E-21:36:3:0:3:43 1/1:43:12:7:5:13:92.31%:58:1.3461E-6:38:1:0:1:13 0/1:37:22:13:9:22:88%:99:2.5916E-11:36:3:2:1:25 1/1:45:16:9:7:17:94.12%:81:7.7134E-9:32:1:1:0:17 1/1:50:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:37:16:10:6:18:88.89%:76:2.0936E-8:35:2:0:2:18 1/1:43:11:6:5:12:91.67%:53:4.8074E-6:25:1:1:0:12 1/1:40:14:8:6:14:93.33%:69:1.0315E-7:34:1:0:1:15 0/1:44:20:12:8:23:86.96%:95:3.1579E-10:51:3:1:2:23 0/1:39:22:10:12:23:88%:99:2.5916E-11:46:3:3:0:26 1/1:40:19:11:8:17:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:19:12:7:18:95%:99:2.8292E-11:0:0:0:0:20 1/1:48:22:9:13:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:17:4:13:18:94.44%:86:2.0936E-9:71:1:1:0:19 0/1:36:12:3:9:13:85.71%:55:2.9913E-6:51:2:1:1:15 1/1:42:11:2:9:12:91.67%:53:4.8074E-6:37:1:1:0:12 0/1:41:20:10:10:21:86.96%:98:1.3117E-10:32:2:0:2:23 1/1:37:28:20:8:27:93.33%:99:4.194E-15:48:2:1:1:30 1/1:49:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:36:13:8:5:14:86.67%:60:8.7675E-7:33:2:2:0:15 1/1:37:21:13:8:22:91.3%:99:3.6437E-11:35:2:0:2:23 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:9:4:5:9:90%:42:5.9538E-5:34:1:0:1:12 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:13:8:5:14:92.86%:64:3.7391E-7:33:1:1:0:14 1/1:41:21:14:7:23:91.3%:99:3.6437E-11:28:2:1:1:23 1/1:43:14:7:7:15:93.33%:69:1.0315E-7:60:1:1:0:15 1/1:38:44:27:17:47:91.67%:99:4.207E-23:33:4:0:4:48 1/1:37:20:10:10:19:90.91%:98:1.3117E-10:35:2:1:1:22 1/1:46:23:16:7:24:95.83%:99:7.7525E-13:38:1:0:1:24 1/1:42:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:14:6:8:15:93.33%:69:1.0315E-7:29:1:0:1:15 1/1:38:25:13:12:26:92.59%:99:2.0853E-13:36:2:1:1:27 0/1:41:15:8:7:15:88.24%:71:7.3277E-8:35:2:1:1:17 0/1:36:18:8:10:21:85.71%:84:3.7603E-9:34:3:2:1:21 1/1:40:23:13:10:23:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:36:24:16:8:22:92.31%:99:7.6222E-13:34:2:1:1:26 1/1:40:29:17:12:30:96.67%:99:2.6212E-16:35:1:1:0:30 1/1:35:29:13:16:32:90.62%:99:3.5714E-15:38:3:2:1:32 0/1:35:7:3:4:8:77.78%:29:1.1312E-3:32:2:0:2:9 0/1:40:22:8:14:24:88%:99:1.0078E-11:34:2:0:2:25 1/1:39:25:11:14:26:96.15%:99:5.4444E-14:38:1:0:1:26 1/1:40:31:22:9:32:96.88%:99:1.8007E-17:38:1:0:1:32 1/1:40:30:16:14:32:93.75%:99:3.0612E-16:59:2:1:1:32 0/1:39:30:17:13:33:88.24%:99:2.5943E-15:33:4:3:1:34 1/1:39:26:9:17:28:92.86%:99:5.6872E-14:31:2:0:2:28 0/1:39:25:12:13:26:89.29%:99:5.8768E-13:36:3:0:3:28 1/1:35:20:8:12:21:95.24%:99:4.0873E-11:34:1:0:1:21 0/1:35:26:13:13:30:78.79%:99:2.5824E-12:35:7:2:5:33 0/1:33:16:10:6:20:76.19%:69:1.2221E-7:34:5:2:3:21 1/1:39:25:14:11:27:92.59%:99:2.0853E-13:35:2:0:2:27 0/1:34:16:8:8:18:84.21%:73:4.357E-8:35:3:0:3:19 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:20:11:9:20:90.91%:98:1.3117E-10:29:2:1:1:22 0/1:37:7:2:5:9:77.78%:31:6.993E-4:38:1:1:0:9 0/1:44:12:9:3:14:85.71%:55:2.9913E-6:30:2:1:1:14 1/1:38:22:11:11:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:22:9:13:23:91.67%:99:1.0078E-11:31:2:1:1:24 0/1:40:8:2:6:8:88.89%:36:2.0568E-4:34:1:0:1:10 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:18:5:13:20:90%:87:1.6758E-9:35:2:2:0:20 1/1:39:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:21 0/1:43:7:2:5:9:77.78%:29:1.1312E-3:35:2:2:0:9 1/1:42:9:1:8:9:90%:46:2.0568E-5:0:0:0:0:10 1/1:39:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 0/1:33:16:5:11:16:88.89%:76:2.0936E-8:37:2:1:1:18 1/1:39:15:7:8:16:93.75%:75:2.8282E-8:33:1:0:1:16 0/1:33:7:2:5:7:87.5%:31:6.993E-4:34:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:25:14:11:25:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:36:29:13:16:31:90.62%:99:3.5714E-15:52:3:1:2:32 1/1:38:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:26 0/1:40:24:14:10:28:82.76%:99:9.2544E-12:35:5:0:5:29 1/1:40:25:12:13:26:92.59%:99:2.0853E-13:33:2:2:0:27 0/1:41:25:15:10:28:89.29%:99:5.8768E-13:36:3:1:2:28 0/1:37:17:11:6:19:89.47%:82:5.9414E-9:31:2:1:1:19 0/1:37:17:9:8:19:89.47%:82:5.9414E-9:35:2:1:1:19 1/1:41:24:12:12:25:96%:99:3.101E-14:0:0:0:0:25 0/1:38:20:11:9:25:80%:89:1.1273E-9:34:5:4:1:25 1/1:34:12:3:9:11:92.31%:58:1.3461E-6:33:1:0:1:13 1/1:35:19:10:9:16:100%:99:2.8292E-11:0:0:0:0:19 0/1:37:20:14:6:23:83.33%:95:3.1579E-10:33:3:0:3:24 1/1:37:26:10:16:27:92.86%:99:5.6872E-14:49:2:1:1:28 1/1:35:25:14:11:23:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 2358029 . T TG . PASS AC=294;AF=0.980;AN=300;ANN=TG|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2358029_2358030insG||||||,TG|intragenic_variant|MODIFIER|PE_PGRS36_Rv2098c|gene2138|gene_variant|gene2138|||n.2358029_2358030insG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:39:24:15:38:97.5%:99:3.8137E-22:35:1:0:1:40 1/1:38:18:11:7:16:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:44:17:27:41:95.65%:99:4.4304E-25:33:1:1:0:45 1/1:35:17:11:6:15:94.44%:86:2.0936E-9:39:1:1:0:18 0/1:42:28:13:15:32:87.5%:99:3.2142E-14:34:4:2:2:32 1/1:40:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:11:16:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:7:15:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:28:15:13:30:93.33%:99:4.194E-15:46:2:1:1:30 1/1:44:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:43:28:15:43:93.48%:99:4.485E-23:35:3:3:0:46 0/1:41:14:9:5:16:87.5%:65:2.5454E-7:60:2:1:1:16 1/1:42:32:23:9:34:94.12%:99:2.2142E-17:35:2:1:1:34 1/1:41:26:12:14:26:96.3%:99:1.4382E-14:33:1:1:0:27 1/1:38:20:11:9:20:95.24%:99:4.0873E-11:60:1:0:1:21 1/1:38:23:10:13:21:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:18:9:9:16:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:11:6:5:10:91.67%:53:4.8074E-6:33:1:0:1:12 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:25:15:10:25:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:40:45:22:23:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:15:6:9:14:93.75%:75:2.8282E-8:32:1:1:0:16 1/1:38:26:11:15:27:92.86%:99:5.6872E-14:35:2:2:0:28 1/1:35:39:20:19:37:95.12%:99:2.1258E-21:35:2:2:0:41 1/1:39:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:17:11:6:16:94.44%:86:2.0936E-9:39:1:1:0:18 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:49:27:22:48:98%:99:5.0549E-28:34:1:0:1:50 1/1:39:39:17:22:37:97.5%:99:3.8137E-22:33:1:1:0:40 1/1:39:32:24:8:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:41:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:31:16:15:27:100%:99:2.1486E-18:0:0:0:0:31 0/1:42:31:15:16:33:88.57%:99:2.7308E-16:51:3:2:1:35 1/1:36:36:14:22:33:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:41:32:17:15:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:45:18:27:45:97.83%:99:1.1441E-25:33:1:1:0:46 1/1:40:37:19:18:35:97.37%:99:5.6582E-21:38:1:1:0:38 1/1:41:42:17:25:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:37:20:17:35:97.37%:99:5.6582E-21:37:1:1:0:38 1/1:38:33:15:18:32:97.06%:99:1.2301E-18:36:1:0:1:34 1/1:42:26:16:10:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:21:14:7:21:95.45%:99:1.0931E-11:24:1:1:0:22 1/1:38:31:20:11:31:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:40:38:24:14:38:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:38:41:20:21:38:97.62%:99:2.5612E-23:60:1:0:1:42 1/1:38:39:20:19:40:95.12%:99:2.1258E-21:48:2:2:0:41 1/1:39:41:25:16:42:95.35%:99:1.4915E-22:48:2:2:0:44 1/1:37:23:13:10:24:92%:99:2.7767E-12:33:2:1:1:25 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:45:25:20:44:95.74%:99:7.2338E-25:34:2:2:0:47 1/1:39:32:16:16:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:22:8:14:24:91.67%:99:1.0078E-11:35:2:1:1:24 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:35:23:12:34:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:39:35:20:15:35:94.59%:99:4.2437E-19:35:2:1:1:37 1/1:41:20:8:12:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:46:27:19:47:95.83%:99:1.9036E-25:34:2:1:1:48 1/1:42:30:14:16:28:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 0/1:42:17:10:7:19:89.47%:82:5.9414E-9:33:2:1:1:19 1/1:38:40:25:15:40:93.02%:99:2.287E-21:34:3:2:1:43 1/1:41:21:10:11:21:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:40:34:14:20:34:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:37:52:32:20:52:94.55%:99:3.1317E-28:35:3:0:3:55 1/1:37:25:13:12:24:96.15%:99:5.4444E-14:50:1:0:1:26 1/1:43:49:24:25:49:98%:99:5.0549E-28:34:1:1:0:50 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:13:10:3:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:33:15:18:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:13:16:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:39:34:16:18:34:97.14%:99:3.2089E-19:39:1:1:0:35 1/1:39:31:17:14:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:27:12:15:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:25:19:6:26:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:38:26:14:12:26:96.3%:99:1.4382E-14:35:1:0:1:27 1/1:35:23:15:8:21:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:39:54:22:32:51:98.18%:99:5.6837E-31:35:1:1:0:55 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 0/1:40:23:10:13:25:88.46%:99:7.3681E-12:35:3:2:1:26 1/1:38:26:14:12:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:19:9:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:31:16:15:32:93.94%:99:8.2416E-17:47:2:1:1:33 1/1:41:18:9:9:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:28:13:15:29:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:42:21:5:16:21:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:44:16:7:9:16:94.12%:81:7.7134E-9:60:1:0:1:17 1/1:37:38:18:20:37:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:40:17:9:8:18:94.44%:86:2.0936E-9:35:1:0:1:18 1/1:38:37:20:17:38:92.5%:99:5.6582E-21:60:1:1:0:40 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:28:21:7:29:96.55%:99:9.9776E-16:32:1:0:1:29 1/1:41:31:12:19:32:93.94%:99:8.2416E-17:38:2:2:0:33 1/1:39:31:15:16:33:93.94%:99:8.2416E-17:46:2:2:0:34 1/1:37:25:13:12:25:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:36:30:18:12:26:96.77%:99:6.8754E-17:35:1:0:1:31 1/1:38:32:14:18:32:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:26:15:11:22:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:18:7:11:19:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:40:31:20:11:33:93.94%:99:8.2416E-17:33:2:1:1:33 1/1:42:34:17:17:34:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:38:35:15:20:35:92.11%:99:1.5466E-18:34:3:1:2:38 1/1:39:38:21:17:37:97.44%:99:1.4697E-21:60:1:1:0:39 1/1:39:44:27:17:43:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:35:14:21:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:24:19:5:22:100%:99:3.101E-14:0:0:0:0:24 1/1:37:23:16:7:21:92%:99:2.7767E-12:31:2:2:0:25 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/1:37:26:15:11:28:89.66%:99:1.6496E-13:38:3:3:0:30 1/1:37:32:25:7:33:91.43%:99:7.5196E-17:34:3:2:1:35 1/1:37:20:13:7:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:15:10:5:16:93.75%:75:2.8282E-8:35:1:0:1:16 1/1:38:36:18:18:36:97.3%:99:2.1762E-20:37:1:1:0:37 1/1:40:52:32:20:53:98.11%:99:8.609E-30:34:1:1:0:53 1/1:39:30:14:16:33:90.91%:99:9.89E-16:34:3:2:1:33 1/1:38:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:33:19:14:32:94.29%:99:5.9366E-18:35:2:2:0:35 1/1:36:30:18:12:28:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:38:29:9:39:97.44%:99:1.4697E-21:37:1:1:0:40 1/1:36:32:19:13:29:100%:99:5.4567E-19:0:0:0:0:32 1/1:33:25:15:10:22:96.15%:99:5.4444E-14:33:1:1:0:26 1/1:37:25:23:2:27:92.59%:99:2.0853E-13:35:2:1:1:27 1/1:37:35:23:12:33:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:37:27:16:11:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:25:15:10:24:96.15%:99:5.4444E-14:30:1:0:1:26 1/1:36:26:19:7:25:96.3%:99:1.4382E-14:38:1:1:0:27 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:20:11:9:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:25:12:13:25:92.59%:99:2.0853E-13:36:2:1:1:27 1/1:38:44:30:14:44:97.78%:99:4.4304E-25:32:1:0:1:45 1/1:35:30:17:13:26:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:39:24:15:39:95.12%:99:2.1258E-21:33:2:1:1:41 1/1:36:29:18:11:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:29:18:11:29:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:24:15:9:25:96%:99:2.0568E-13:37:1:1:0:25 1/1:38:32:18:14:29:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:23:13:10:23:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:39:16:9:7:16:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:41:28:17:11:28:96.55%:99:9.9776E-16:32:1:0:1:29 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:35:38:24:14:37:90.48%:99:9.7197E-20:42:4:3:1:42 1/1:38:35:22:13:33:97.22%:99:8.3613E-20:37:1:1:0:36 MTB_anc 2368564 . TA T . PASS AC=297;AF=0.990;AN=300;ANN=T|intergenic_region|MODIFIER|PPE36_Rv2108-prcA_Rv2109c|gene2147-gene2148|intergenic_region|gene2147-gene2148|||n.2368565delA||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:17:26:41:100%:99:1.5066E-25:0:0:0:0:43 0/1:45:14:9:5:15:87.5%:65:2.5454E-7:47:2:1:1:16 1/1:44:51:19:32:51:98.08%:99:3.3479E-29:33:1:1:0:52 1/1:43:39:19:20:37:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:38:17:21:35:97.44%:99:1.4697E-21:33:1:1:0:39 1/1:43:32:12:20:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:9:24:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:17:15:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:14:25:36:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:43:19:24:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:28:11:17:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:17:17:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:27:11:16:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:8:17:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:22:8:14:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:23:12:11:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:23:10:13:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:55:28:27:54:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:28:12:16:28:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:44:39:16:23:37:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:31:10:21:27:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:20:10:10:21:95.24%:99:4.0873E-11:60:1:0:1:21 1/1:42:26:12:14:27:96.3%:99:1.4382E-14:35:1:1:0:27 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:16:3:13:15:94.12%:81:7.7134E-9:33:1:0:1:17 1/1:40:28:15:13:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:15:16:31:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:45:30:11:19:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:17:16:33:94.29%:99:5.9366E-18:33:2:0:2:35 1/1:41:43:23:20:42:97.73%:99:1.7144E-24:35:1:0:1:44 1/1:39:34:14:20:31:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:55:28:27:53:98.21%:99:1.4593E-31:33:1:1:0:56 1/1:47:35:18:17:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:20:18:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 0/1:38:16:7:9:17:88.89%:76:2.0936E-8:60:2:2:0:18 1/1:42:27:10:17:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:28:14:14:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:32:13:19:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:17:16:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:44:35:17:18:34:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:19:15:4:19:95%:98:1.5234E-10:32:1:0:1:20 1/1:41:33:16:17:34:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/1:43:17:10:7:19:89.47%:82:5.9414E-9:32:2:1:1:19 1/1:38:24:11:13:22:100%:99:3.101E-14:0:0:0:0:24 1/1:38:34:19:15:35:97.14%:99:3.2089E-19:26:1:1:0:35 1/1:41:27:18:9:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:12:11:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:33:15:18:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:19:12:32:93.94%:99:8.2416E-17:48:2:2:0:33 1/1:41:24:13:11:23:100%:99:3.101E-14:0:0:0:0:24 1/1:39:30:10:20:27:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:46:28:18:44:97.87%:99:2.9526E-26:32:1:0:1:47 1/1:38:27:11:16:22:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:14:13:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:45:47:21:26:45:97.92%:99:7.6145E-27:32:1:1:0:48 1/1:45:29:13:16:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:37:16:21:35:94.87%:99:3.0128E-20:36:2:0:2:39 1/1:45:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:22:8:14:21:95.65%:99:2.9149E-12:32:1:0:1:23 1/1:45:33:13:20:33:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:21:10:11:22:95.45%:99:1.0931E-11:34:1:0:1:22 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:17:16:34:94.29%:99:5.9366E-18:34:2:1:1:35 1/1:39:24:6:18:22:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:14:19:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:25:12:13:25:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:39:30:15:15:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:29:13:16:28:96.67%:99:2.6212E-16:35:1:0:1:30 1/1:46:42:25:17:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:25:16:9:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:31:13:18:28:93.94%:99:8.2416E-17:33:2:2:0:33 1/1:42:22:8:14:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:15:18:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:16:12:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:42:19:23:41:97.67%:99:6.6289E-24:25:1:1:0:43 1/1:41:27:11:16:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:12:19:28:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:24:11:13:22:100%:99:3.101E-14:0:0:0:0:25 1/1:39:31:14:17:28:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:35:15:20:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:10:23:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:17:19:33:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:13:24:35:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:24:6:18:23:100%:99:3.101E-14:0:0:0:0:24 1/1:38:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:8:17:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:12:20:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:17:15:33:96.97%:99:4.7095E-18:32:1:0:1:33 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:37:19:18:36:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:39:26:10:16:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:20:10:10:20:95.24%:99:4.0873E-11:34:1:0:1:21 1/1:39:34:17:17:32:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:26:14:12:26:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:36:45:19:26:42:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:28:18:10:27:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:40:30:18:12:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:20:8:12:19:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:65:31:34:61:98.48%:99:1.7754E-37:32:1:1:0:66 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:37:19:18:35:97.37%:99:5.6582E-21:32:1:1:0:38 1/1:38:19:10:9:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:53:33:20:50:100%:99:1.5943E-31:0:0:0:0:53 1/1:38:26:13:13:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:35:16:19:32:100%:99:8.9137E-21:0:0:0:0:35 1/1:33:47:23:24:40:100%:99:6.1512E-28:0:0:0:0:47 1/1:36:26:15:11:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:31:15:16:31:93.94%:99:8.2416E-17:33:2:1:1:33 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:35:24:11:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:33:14:19:29:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:40:22:18:38:97.56%:99:9.8874E-23:35:1:1:0:41 1/1:37:34:16:18:30:100%:99:3.5146E-20:0:0:0:0:34 1/1:33:30:12:18:25:96.77%:99:6.8754E-17:32:1:0:1:31 1/1:40:37:20:17:36:97.37%:99:5.6582E-21:32:1:0:1:38 1/1:37:55:27:28:53:98.21%:99:1.4593E-31:37:1:1:0:56 1/1:39:39:16:23:35:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:35:17:18:32:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:28:8:20:28:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:43:24:12:12:23:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:12:14:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:42:18:24:41:97.67%:99:6.6289E-24:32:1:0:1:43 1/1:42:38:15:23:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:25:11:14:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:17:18:36:97.22%:99:8.3613E-20:35:1:0:1:36 1/1:41:39:21:18:38:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:45:27:18:43:97.83%:99:1.1441E-25:32:1:0:1:46 1/1:40:34:17:17:33:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 2369186 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|prcA_Rv2109c|gene2148|transcript|Transcript_gene2148|Coding|1/1|c.544G>C|p.Gly182Arg|544/747|544/747|182/248||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2369186C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2369186C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:54:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:42:19:23:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:23:12:11:24:95.83%:99:7.7525E-13:60:1:1:0:24 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:53:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:70:29:41:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:52:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:54:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 2372436 . GGCCCGCCGACGATGCGGGCCGCGCAGCGGGCCGCTGAGGAGGCGGGCATCAAGCAAC GGCCCGCCGACGATGCGGGCCGCGCAGCGGGCCGCTGAGGAGGCGGGCATCAAGCAACGCCCGCCGACGATGCGGGCCGCGCAGCGGGCCGCTGAGGAGGCGGGCATCAAGCAAC,G . PASS AC=48,35;AF=0.161,0.117;AN=298;HOM=0;NC=0;set=variant-filterI-filterI GT:ABQ:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:11:5:37:42.11%:57:1.9143E-6:39:21:11:10:39 0/0:0:0:0:10:0%:17:1E0:41:10:4:6:10 0/1:40:4:4:33:24.24%:26:2.4173E-3:39:25:17:8:33 0/0:38:1:1:19:10.53%:21:2.4324E-1:39:17:11:6:19 0/2:44:5:3:10:80%:34:3.5723E-4:36:2:0:2:10 0/2:51:8:5:17:76.47%:55:2.5647E-6:35:4:2:2:17 0/0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/1:37:8:5:22:59.09%:50:9.5813E-6:36:9:8:1:22 0/0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:21:0%:40:1E0:41:21:12:9:22 0/2:44:6:8:18:73.68%:59:1.2025E-6:46:5:3:2:19 0/0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:11:0%:22:1E0:45:11:7:4:11 0/0:39:0:1:32:3.12%:48:5E-1:37:31:19:12:36 0/0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:33:1:0:23:4.35%:31:5E-1:41:21:14:7:24 0/0:42:3:2:15:33.33%:6:2.1073E-2:40:10:8:2:15 0/0:51:2:3:17:29.41%:6:2.1691E-2:35:11:6:5:18 ./.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:19:0%:37:1E0:42:19:14:5:20 0/1:41:10:3:30:43.33%:46:2.3178E-5:36:17:8:9:33 0/1:36:5:5:32:31.25%:33:4.259E-4:38:22:12:10:34 0/0:0:0:0:21:0%:40:1E0:40:21:11:10:22 0/0:0:0:0:25:0%:48:1E0:39:25:12:13:27 0/1:40:5:6:40:27.5%:36:2.2064E-4:37:29:13:16:42 0/2:49:4:3:16:43.75%:24:3.3988E-3:43:9:5:4:16 0/0:38:0:1:20:5%:27:5E-1:37:19:10:9:22 0/2:49:12:9:24:87.5%:99:9.0704E-11:45:3:0:3:24 0/0:33:1:0:18:5.56%:24:5E-1:42:16:9:7:19 0/2:47:12:10:33:66.67%:89:1.0623E-9:45:11:5:6:34 0/0:0:0:0:31:0%:59:1E0:40:31:22:9:35 0/1:41:6:1:26:26.92%:23:4.7006E-3:39:17:7:10:27 0/0:36:2:2:13:28.57%:6:4.8889E-2:43:10:7:3:14 0/1:42:5:4:25:34.62%:31:7.4174E-4:36:14:7:7:25 0/0:37:0:1:26:3.85%:38:5E-1:43:24:10:14:27 0/1:40:5:5:25:38.46%:34:3.3576E-4:40:16:7:9:27 0/1:40:8:1:23:39.13%:31:7.4174E-4:39:14:7:7:23 0/1:38:15:4:47:40.43%:67:1.9354E-7:39:28:13:15:48 0/1:37:6:1:29:24.14%:22:5.0143E-3:42:20:6:14:31 0/1:38:5:7:34:34.29%:41:7.5302E-5:43:22:14:8:35 0/0:38:3:1:34:11.76%:31:5.6946E-2:38:30:16:14:35 0/1:44:5:4:36:25%:29:1.0857E-3:38:26:16:10:36 0/0:35:2:2:21:19.05%:13:5.251E-2:46:15:7:8:22 0/0:0:0:0:29:0%:51:1E0:40:28:16:12:32 0/2:49:11:11:35:62.86%:87:1.7197E-9:40:13:5:8:35 0/0:41:1:3:21:19.05%:13:5.251E-2:46:15:10:5:24 0/0:37:3:2:26:18.52%:19:2.5527E-2:39:22:9:13:27 0/0:39:2:0:39:5.13%:50:2.4658E-1:39:35:18:17:39 0/1:36:4:4:36:22.22%:25:2.5282E-3:39:28:15:13:37 0/0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/1:39:7:2:17:52.94%:33:4.6348E-4:42:8:4:4:18 0/2:42:14:12:37:70.27%:99:1.294E-11:38:11:6:5:40 0/0:0:0:0:18:0%:32:1E0:38:18:12:6:20 0/1:46:5:3:25:30.77%:26:2.0146E-3:39:17:10:7:27 0/1:38:6:4:21:47.62%:36:2.3971E-4:40:11:4:7:21 0/1:43:7:5:34:35.29%:41:6.8751E-5:42:20:12:8:36 0/0:37:0:1:27:3.7%:41:5E-1:36:26:16:10:29 0/0:37:1:0:17:5.88%:24:5E-1:37:16:9:7:18 0/1:36:7:5:31:36.36%:41:6.8751E-5:37:20:15:5:35 0/0:46:1:4:26:19.23%:17:2.531E-2:42:21:10:11:26 0/2:50:5:6:14:78.57%:47:1.6951E-5:43:3:2:1:14 0/0:38:4:2:25:24%:11:1.0968E-2:38:18:5:13:27 0/1:39:10:4:41:34.15%:47:1.6028E-5:37:27:15:12:42 0/2:43:6:6:15:80%:52:5.2605E-6:43:3:1:2:15 0/2:48:5:11:22:72.73%:67:1.7905E-7:39:6:4:2:23 0/2:43:13:10:31:69.7%:95:2.6558E-10:36:10:3:7:35 0/2:45:8:8:23:69.57%:66:2.4726E-7:35:7:1:6:23 0/2:49:15:12:31:84.38%:99:2.3785E-13:46:5:4:1:33 0/0:33:1:0:15:6.67%:17:5E-1:43:13:7:6:16 0/0:37:1:3:16:25%:8:4.9808E-2:42:11:4:7:17 0/0:42:2:2:19:21.05%:13:5.251E-2:37:15:9:6:19 0/2:53:8:8:19:84.21%:73:4.357E-8:36:3:1:2:19 0/0:0:0:0:12:0%:21:1E0:46:12:9:3:12 0/2:48:8:6:22:63.64%:55:2.7817E-6:41:8:4:4:23 0/2:43:10:9:31:61.29%:74:3.2956E-8:36:12:3:9:31 0/0:36:5:1:20:28.57%:9:1.0344E-2:40:15:5:10:21 0/1:39:4:5:29:30%:30:9.4048E-4:41:20:9:11:31 0/1:36:4:3:25:25.93%:22:5.0143E-3:44:20:12:8:27 0/1:47:9:5:35:40%:49:1.1295E-5:37:20:13:7:35 0/1:41:7:4:34:32.35%:37:1.8019E-4:41:22:15:7:36 0/0:41:2:4:27:22.22%:13:1.1309E-2:36:20:8:12:29 0/2:45:12:17:38:76.32%:99:1.977E-13:39:9:4:5:38 0/0:33:1:0:27:3.7%:41:5E-1:36:26:16:10:28 0/0:41:2:3:18:27.78%:8:2.2727E-2:40:13:8:5:18 0/2:43:8:17:34:73.53%:99:1.9819E-11:35:9:5:4:35 0/0:34:0:1:21:4.76%:27:5E-1:35:19:12:7:22 0/1:38:3:4:32:21.88%:22:5.2713E-3:39:23:11:12:32 0/0:37:3:0:9:33.33%:4:1.0294E-1:43:6:3:3:9 0/1:41:3:3:18:33.33%:20:9.5308E-3:40:12:6:6:18 0/1:36:4:2:18:33.33%:20:9.5308E-3:38:12:4:8:19 0/2:49:7:12:25:76%:82:5.8245E-9:40:6:3:3:26 0/0:0:0:0:20:0%:36:1E0:44:20:10:10:21 0/1:33:9:3:33:34.29%:41:7.5302E-5:38:22:13:9:37 0/0:33:0:1:19:5.26%:28:5E-1:38:18:8:10:19 0/1:43:11:5:35:45.71%:58:1.364E-6:37:17:6:11:36 0/0:38:0:1:16:6.25%:21:5E-1:36:15:7:8:16 0/0:31:0:1:12:8.33%:14:5E-1:38:11:8:3:15 0/1:39:12:2:27:51.85%:52:5.4595E-6:42:12:7:5:27 0/2:41:8:12:29:68.97%:82:5.4216E-9:35:9:4:5:31 0/0:0:0:0:21:0%:40:1E0:37:21:10:11:25 0/1:38:6:1:18:38.89%:24:3.6151E-3:40:10:6:4:19 0/0:0:0:0:27:0%:52:1E0:38:27:20:7:30 0/2:45:5:8:18:68.42%:53:5.0106E-6:36:6:2:4:20 0/2:45:9:7:21:76.19%:69:1.2221E-7:39:5:3:2:21 0/0:37:1:0:17:5.88%:24:5E-1:36:16:11:5:17 0/1:38:8:3:29:37.93%:38:1.5195E-4:40:18:11:7:30 0/1:39:5:2:17:41.18%:25:3.1609E-3:39:8:5:3:18 0/1:37:12:1:35:37.14%:45:3.1103E-5:42:22:8:14:35 0/0:0:0:0:23:0%:44:1E0:37:23:13:10:24 0/0:0:0:0:28:0%:51:1E0:39:28:15:13:30 0/1:37:5:3:21:38.1%:27:1.638E-3:36:12:3:9:23 0/0:33:1:0:20:5%:27:5E-1:37:19:14:5:20 0/1:36:5:1:18:33.33%:20:9.5308E-3:36:12:8:4:20 0/1:36:6:3:22:40.91%:31:6.592E-4:39:12:4:8:23 0/1:37:7:1:31:25.81%:26:2.2875E-3:35:22:9:13:32 0/1:35:9:1:32:30.3%:33:4.3872E-4:36:23:13:10:37 0/1:39:5:2:30:23.33%:22:5.2713E-3:36:23:8:15:30 0/2:41:8:9:24:70.83%:70:8.1543E-8:35:7:3:4:25 0/0:42:3:2:11:45.45%:3:1.7544E-2:35:6:3:3:12 0/1:37:16:6:41:53.66%:83:4.1855E-9:39:18:7:11:41 0/2:44:17:15:38:84.21%:99:1.0241E-15:36:6:2:4:39 0/1:38:8:0:28:28.57%:26:2.188E-3:41:20:8:12:28 0/1:40:7:1:19:42.11%:28:1.5455E-3:38:11:4:7:21 0/2:38:12:12:34:70.59%:99:8.7205E-11:36:10:5:5:38 0/0:0:0:0:13:0%:25:1E0:36:13:3:10:13 0/1:40:5:3:20:40%:28:1.5455E-3:36:11:4:7:24 0/0:0:0:0:20:0%:36:1E0:36:20:9:11:24 0/0:0:0:0:34:0%:62:1E0:37:34:21:13:38 0/0:0:0:0:23:0%:44:1E0:35:23:15:8:26 0/0:24:0:1:25:4%:34:5E-1:37:23:16:7:28 0/0:0:0:0:24:0%:44:1E0:37:24:16:8:27 0/2:45:8:8:19:80%:71:7.7086E-8:36:4:2:2:24 0/0:0:0:0:26:0%:47:1E0:36:26:16:10:28 0/2:37:11:9:29:66.67%:81:7.1675E-9:36:10:4:6:31 0/2:38:7:3:16:58.82%:38:1.4831E-4:36:7:4:3:17 0/2:36:7:1:17:44.44%:28:1.4461E-3:39:10:7:3:19 0/1:38:10:4:42:33.33%:48:1.4735E-5:37:25:13:12:45 0/0:37:1:0:22:4.55%:31:5E-1:38:21:14:7:24 0/0:0:0:0:29:0%:55:1E0:40:29:16:13:32 0/2:41:13:7:26:71.43%:84:3.9563E-9:40:8:2:6:28 0/2:48:6:11:27:62.96%:67:1.7891E-7:41:10:6:4:27 0/1:38:8:0:16:50%:29:1.0995E-3:44:7:3:4:16 0/2:42:8:3:22:50%:40:9.1981E-5:41:11:4:7:22 0/1:37:4:4:24:33.33%:27:1.949E-3:44:16:6:10:25 0/0:0:0:0:26:0%:47:1E0:37:26:16:10:26 0/0:0:0:0:10:0%:17:1E0:38:10:7:3:11 0/2:45:12:2:20:70%:57:1.6702E-6:36:6:1:5:20 0/2:49:9:10:27:70.37%:79:1.2089E-8:39:8:2:6:27 0/0:37:2:3:27:18.52%:19:2.5527E-2:38:22:13:9:28 0/0:0:0:0:33:0%:63:1E0:38:33:23:10:36 MTB_anc 2372493 . C G . PASS AC=2;AF=8.696e-03;AN=230;ANN=G|missense_variant|MODERATE|dop_Rv2112c|gene2151|transcript|Transcript_gene2151|Coding|1/1|c.77G>C|p.Arg26Pro|77/1665|77/1665|26/554||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2372493C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2372493C>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:59 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:18 0/0:0:0:0:0:50:0%:92:1E0:42:50:25:25:56 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 0/0:29:1:1:0:37:2.7%:59:5E-1:49:36:19:17:44 0/0:37:1:1:0:37:2.7%:59:5E-1:40:36:17:19:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:33 0/0:0:0:0:0:33:0%:63:1E0:50:33:21:12:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:47 0/0:0:0:0:0:12:0%:21:1E0:42:12:6:6:13 0/0:0:0:0:0:48:0%:89:1E0:39:48:27:21:54 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:23 0/0:0:0:0:0:17:0%:33:1E0:36:17:8:9:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:24:0%:44:1E0:49:24:18:6:30 0/0:0:0:0:0:42:0%:77:1E0:39:42:26:16:52 0/0:0:0:0:0:40:0%:74:1E0:37:40:16:24:46 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:34 0/0:0:0:0:0:43:0%:82:1E0:40:43:18:25:46 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 0/0:0:0:0:0:45:0%:85:1E0:43:45:28:17:49 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:43 0/0:34:1:0:1:36:2.78%:55:5E-1:47:35:16:19:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:36 0/0:0:0:0:0:61:0%:99:1E0:46:61:36:25:74 0/0:0:0:0:0:36:0%:67:1E0:40:35:20:15:39 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:52 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:39 0/0:0:0:0:0:32:0%:59:1E0:43:31:12:19:33 0/0:0:0:0:0:36:0%:66:1E0:38:36:19:17:40 ./.:.:.:.:.:.:.:.:.:.:.:.:.:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:43 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:43 0/0:36:1:1:0:62:1.61%:99:5E-1:41:61:27:34:66 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:36 0/0:0:0:0:0:19:0%:37:1E0:45:19:15:4:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:25 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:23 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:37 0/0:0:0:0:0:38:0%:70:1E0:40:38:25:13:40 0/0:0:0:0:0:52:0%:97:1E0:39:51:24:27:53 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:49 0/0:0:0:0:0:25:0%:44:1E0:41:24:13:11:29 0/0:0:0:0:0:52:0%:96:1E0:41:52:31:21:59 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:37 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:31 0/0:38:2:1:1:47:4.26%:67:2.4731E-1:44:45:26:19:51 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:25 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:20 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:20 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:30 0/0:0:0:0:0:42:0%:78:1E0:39:41:18:23:44 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:39 0/0:32:1:0:1:39:2.56%:62:5E-1:45:38:22:16:44 0/0:0:0:0:0:41:0%:78:1E0:42:41:28:13:46 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:43 ./.:.:.:.:.:.:.:.:.:.:.:.:.:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:49 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:25 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:39 0/0:0:0:0:0:14:0%:25:1E0:40:14:9:5:17 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:55:0%:99:1E0:41:54:32:22:59 0/0:0:0:0:0:24:0%:44:1E0:40:23:12:11:26 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:56 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:27 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:25 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:43 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:29 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:51 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 0/0:0:0:0:0:23:0%:40:1E0:39:22:16:6:24 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:44 0/0:0:0:0:0:29:0%:51:1E0:41:28:14:14:30 0/0:0:0:0:0:42:0%:77:1E0:43:42:27:15:50 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:36 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:22:7:31 0/0:0:0:0:0:22:0%:40:1E0:37:22:14:8:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:37 0/0:0:0:0:0:38:0%:70:1E0:37:38:19:19:39 0/0:0:0:0:0:49:0%:93:1E0:39:49:25:24:52 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:17 0/0:0:0:0:0:58:0%:99:1E0:42:58:31:27:67 ./.:.:.:.:.:.:.:.:.:.:.:.:.:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:39 0/0:36:1:0:1:29:3.45%:45:5E-1:39:28:20:8:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:23 0/0:0:0:0:0:34:0%:63:1E0:39:33:16:17:39 0/0:0:0:0:0:40:0%:74:1E0:37:40:20:20:41 0/0:0:0:0:0:57:0%:99:1E0:39:57:33:24:66 0/0:34:1:0:1:41:2.44%:66:5E-1:39:40:23:17:45 0/0:0:0:0:0:43:0%:82:1E0:38:43:26:17:46 0/0:0:0:0:0:41:0%:78:1E0:37:41:21:20:41 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 0/0:0:0:0:0:30:0%:55:1E0:37:30:16:14:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:40:5:3:2:12:100%:24:3.9683E-3:0:0:0:0:14 0/0:0:0:0:0:69:0%:99:1E0:37:68:36:32:73 0/0:0:0:0:0:35:0%:62:1E0:38:34:21:13:38 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:17:7:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:36 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:19 0/0:0:0:0:0:47:0%:89:1E0:38:47:23:24:51 0/0:38:1:1:0:50:2%:80:5E-1:39:49:20:29:52 MTB_anc 2372550 . G C . PASS AC=19;AF=0.063;AN=300;ANN=C|missense_variant|MODERATE|dop_Rv2112c|gene2151|transcript|Transcript_gene2151|Coding|1/1|c.20C>G|p.Pro7Arg|20/1665|20/1665|7/554||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2372550G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2372550G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:2:1:1:47:4.26%:67:2.4731E-1:40:45:20:25:48 0/0:37:2:1:1:15:13.33%:16:2.4138E-1:42:13:11:2:16 0/0:34:3:1:2:46:6.52%:56:1.2088E-1:44:43:19:24:49 0/0:37:3:2:1:27:11.11%:28:1.1792E-1:38:24:13:11:27 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:45:3:1:2:33:9.09%:37:1.1923E-1:45:30:14:16:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:34:4:3:1:24:16.67%:18:5.461E-2:44:20:8:12:28 0/1:33:8:5:3:38:21.05%:25:2.5935E-3:47:30:18:12:44 0/0:0:0:0:0:25:0%:48:1E0:51:25:12:13:25 0/1:38:12:8:4:46:26.09%:39:1.0724E-4:43:34:19:15:48 0/0:38:1:0:1:16:6.25%:21:5E-1:48:15:9:6:17 0/1:32:7:5:2:46:15.22%:22:6.0738E-3:40:38:18:20:49 0/0:35:5:4:1:35:14.29%:30:2.6822E-2:40:30:11:19:38 0/1:33:9:9:0:31:29.03%:30:9.9376E-4:43:22:12:10:36 0/0:38:1:0:1:17:5.88%:24:5E-1:44:16:12:4:18 0/0:0:0:0:0:13:0%:25:1E0:41:13:5:8:16 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:20 0/0:41:5:3:2:26:19.23%:17:2.531E-2:45:21:9:12:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:32 0/0:0:0:0:0:45:0%:81:1E0:43:44:18:26:46 0/0:38:5:3:2:28:17.86%:19:2.5729E-2:46:23:13:10:33 0/1:38:9:4:5:32:28.12%:29:1.0185E-3:44:23:11:12:38 0/0:36:1:0:1:32:3.12%:48:5E-1:39:31:13:18:32 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:34:6:4:2:27:22.22%:16:1.1461E-2:41:21:6:15:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:38:1:0:1:15:6.67%:21:5E-1:38:14:5:9:17 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:38 0/1:37:9:8:1:43:20.93%:29:1.2263E-3:44:34:17:17:49 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:36:3:2:1:29:10.34%:31:1.1842E-1:49:26:22:4:31 0/0:37:2:1:1:36:5.56%:47:2.4648E-1:43:34:12:22:37 0/0:39:5:2:3:32:15.62%:24:2.6412E-2:43:27:8:19:35 0/0:35:2:0:2:32:6.25%:40:2.4603E-1:43:30:14:16:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:31 0/0:38:2:0:2:63:3.17%:95:2.48E-1:42:61:19:42:64 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:41:0%:78:1E0:46:41:18:23:41 0/0:37:1:1:0:35:2.86%:55:5E-1:41:34:18:16:38 0/0:36:1:0:1:30:3.33%:44:5E-1:44:29:13:16:30 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 0/1:39:10:7:3:32:31.25%:33:4.259E-4:38:22:8:14:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:44 0/0:36:1:0:1:35:2.86%:55:5E-1:47:34:19:15:39 0/0:37:2:0:2:30:6.67%:37:2.4561E-1:43:27:15:12:31 0/1:45:10:4:6:45:22.22%:32:5.5766E-4:44:35:18:17:48 0/0:29:2:1:1:49:4.08%:71:2.4742E-1:41:47:21:26:51 0/1:44:11:6:5:35:31.43%:37:1.9282E-4:47:24:13:11:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:23 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:50 0/0:35:6:3:3:23:26.09%:11:1.0777E-2:44:17:6:11:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:27 0/0:37:1:1:0:28:3.57%:41:5E-1:39:27:16:11:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:46 0/0:34:6:3:3:56:10.71%:53:1.3571E-2:42:50:18:32:61 0/0:32:1:1:0:29:3.45%:45:5E-1:39:28:10:18:34 0/0:32:1:1:0:46:2.17%:73:5E-1:41:45:18:27:52 0/0:36:1:0:1:31:3.23%:48:5E-1:42:30:16:14:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:35:2:0:2:30:6.67%:37:2.4576E-1:42:28:15:13:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:31 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:48 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:42:5:4:1:23:21.74%:14:2.4548E-2:51:18:10:8:26 0/0:0:0:0:0:16:0%:29:1E0:49:16:5:11:16 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:26 0/0:42:5:3:2:17:29.41%:8:2.2239E-2:44:12:6:6:17 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:41 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:17 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:32 0/0:37:2:2:0:30:6.67%:37:2.4576E-1:43:28:10:18:32 0/0:37:2:1:1:39:5.13%:54:2.4675E-1:42:37:16:21:42 0/0:35:2:1:1:36:5.56%:47:2.4648E-1:42:34:21:13:37 0/0:0:0:0:0:53:0%:99:1E0:44:53:23:30:54 0/1:38:8:5:3:54:14.81%:25:2.9557E-3:45:46:22:24:57 0/0:37:1:1:0:32:3.12%:48:5E-1:44:31:12:19:32 0/0:36:2:0:2:45:4.44%:64:2.4719E-1:41:43:17:26:46 0/1:40:10:5:5:48:20.83%:32:5.7985E-4:42:38:15:23:50 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:17 0/0:32:1:1:0:23:4.35%:34:5E-1:44:22:9:13:26 0/0:0:0:0:0:15:0%:29:1E0:46:15:5:10:15 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:44:6:4:2:27:22.22%:16:1.1461E-2:47:21:9:12:29 0/0:0:0:0:0:49:0%:93:1E0:39:49:25:24:51 0/0:36:6:3:3:25:24%:14:1.1145E-2:39:19:8:11:28 0/0:38:1:0:1:42:2.38%:66:5E-1:42:41:17:24:42 0/0:39:6:5:1:27:22.22%:16:1.1461E-2:43:21:11:10:29 0/0:40:2:2:0:31:6.45%:40:2.459E-1:40:29:14:15:31 0/0:27:2:1:1:30:6.67%:37:2.4576E-1:41:28:9:19:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/1:41:7:4:3:35:20%:22:5.6095E-3:40:28:9:19:39 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/1:35:14:9:5:54:25.93%:46:2.3225E-5:42:40:21:19:61 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:30 0/0:40:4:4:0:20:20%:13:5.3015E-2:40:16:5:11:26 0/0:0:0:0:0:37:0%:70:1E0:43:37:12:25:37 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 0/0:38:1:0:1:33:3.03%:52:5E-1:40:32:13:19:35 0/1:35:8:4:4:39:20.51%:25:2.624E-3:41:31:13:18:42 0/0:36:3:2:1:29:10.34%:31:1.1842E-1:39:26:11:15:33 0/0:34:1:0:1:25:4%:38:5E-1:42:24:10:14:27 0/0:32:5:5:0:26:19.23%:17:2.531E-2:41:21:12:9:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:22 0/0:37:1:1:0:29:3.45%:45:5E-1:42:28:11:17:29 0/0:0:0:0:0:28:0%:51:1E0:37:28:8:20:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:40 0/0:32:2:1:1:32:6.25%:40:2.4603E-1:38:30:16:14:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:14:0%:25:1E0:47:13:9:4:16 0/0:0:0:0:0:55:0%:99:1E0:40:55:21:34:55 0/0:0:0:0:0:61:0%:99:1E0:43:61:31:30:61 0/0:33:2:0:2:25:8%:31:2.449E-1:41:23:8:15:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:53:0%:99:1E0:38:53:25:28:55 0/0:37:1:1:0:24:4.17%:34:5E-1:38:23:12:11:25 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:38 0/0:36:4:2:2:38:10.53%:37:5.7534E-2:36:34:15:19:40 0/1:36:15:11:4:59:25.42%:49:1.1029E-5:40:44:18:26:65 0/1:34:7:6:1:50:14%:22:6.2398E-3:38:43:18:25:54 0/0:34:5:4:1:43:11.63%:41:2.764E-2:37:38:20:18:46 0/1:38:7:5:2:32:21.88%:22:5.4182E-3:40:25:13:12:36 0/0:0:0:0:0:40:0%:74:1E0:39:40:17:23:45 0/1:34:10:7:3:28:35.71%:34:3.6855E-4:38:18:9:9:29 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:45 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:30 0/0:37:1:1:0:48:2.08%:76:5E-1:37:47:20:27:48 0/0:36:3:2:1:28:10.71%:28:1.1818E-1:39:25:14:11:32 0/1:38:9:6:3:34:26.47%:29:1.0644E-3:38:25:12:13:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:36 0/0:0:0:0:0:38:0%:70:1E0:46:38:13:25:38 0/0:37:2:1:1:21:9.52%:25:2.439E-1:41:19:9:10:22 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:34:2:2:0:34:5.88%:43:2.4627E-1:40:32:14:18:38 0/0:35:6:4:2:30:20%:18:1.186E-2:38:24:10:14:33 0/0:36:1:1:0:21:4.76%:31:5E-1:41:20:11:9:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:20:8:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:44:0%:81:1E0:40:44:14:30:47 0/0:36:6:4:2:37:16.22%:28:1.2549E-2:40:31:8:23:40 MTB_anc 2372682 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2113_Rv2113|gene2152|transcript|Transcript_gene2152|Coding|1/1|c.53A>C|p.Glu18Ala|53/1194|53/1194|18/397||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2372682A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2372682A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:51:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:26:16:10:28:92.86%:99:1.4382E-14:60:1:1:0:28 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:49:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:19:17:37:97.3%:99:2.1762E-20:33:1:0:1:38 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:42:22:20:44:97.67%:99:6.6289E-24:60:1:0:1:44 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:16:7:9:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:36:19:17:37:97.3%:99:2.1762E-20:60:1:0:1:38 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:27:19:8:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:40:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 2373019 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|synonymous_variant|LOW|Rv2113_Rv2113|gene2152|transcript|Transcript_gene2152|Coding|1/1|c.390C>G|p.Ser130Ser|390/1194|390/1194|130/397||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2373019C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2373019C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:29 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:33 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:14:0%:25:1E0:35:14:6:8:15 0/0:0:0:0:0:26:0%:47:1E0:38:26:6:20:26 0/0:38:1:1:0:27:3.7%:41:5E-1:41:26:14:12:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:7:18:25 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:35 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:10 0/0:0:0:0:0:37:0%:70:1E0:38:37:14:23:37 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:37:1:0:1:37:2.7%:59:5E-1:37:36:15:21:37 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:19 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:25:0%:48:1E0:39:25:8:17:26 0/0:0:0:0:0:33:0%:63:1E0:36:33:8:25:35 0/0:0:0:0:0:46:0%:85:1E0:37:46:20:26:46 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:41:0%:78:1E0:38:41:15:26:41 0/0:0:0:0:0:46:0%:85:1E0:38:46:21:25:46 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:23 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:42 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:34 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:44 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/0:0:0:0:0:31:0%:59:1E0:37:31:16:15:33 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:38 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:37:35:13:22:35 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:44 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:37:35:20:15:35 0/0:0:0:0:0:59:0%:99:1E0:38:59:32:27:59 0/0:0:0:0:0:38:0%:70:1E0:36:38:13:25:38 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:18 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:40 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:24 0/0:0:0:0:0:36:0%:66:1E0:38:36:13:23:36 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:35 1/1:37:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:46 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 0/0:0:0:0:0:42:0%:77:1E0:38:42:23:19:42 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:31 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:32 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:35 0/0:0:0:0:0:22:0%:40:1E0:40:22:17:5:23 0/0:0:0:0:0:38:0%:70:1E0:37:38:16:22:38 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:31 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:43 0/0:38:1:0:1:13:7.69%:18:5E-1:39:12:7:5:13 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:21 0/0:0:0:0:0:36:0%:66:1E0:37:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:34 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:16 0/0:0:0:0:0:31:0%:59:1E0:38:31:10:21:32 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:49 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:16 0/0:0:0:0:0:39:0%:74:1E0:38:39:18:21:39 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:39:31:8:23:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:47 0/0:0:0:0:0:30:0%:55:1E0:40:30:9:21:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:22 0/0:0:0:0:0:37:0%:70:1E0:38:37:11:26:38 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:33 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:22 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:18 0/0:0:0:0:0:26:0%:47:1E0:40:26:19:7:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:47:0%:89:1E0:39:47:24:23:47 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:17 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:16 0/0:0:0:0:0:23:0%:44:1E0:38:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:36:29:10:19:29 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:18 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:26 0/0:0:0:0:0:35:0%:67:1E0:37:35:13:22:36 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:36 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:18 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:35:28:9:19:29 0/0:0:0:0:0:37:0%:70:1E0:36:37:10:27:37 0/0:0:0:0:0:21:0%:40:1E0:37:21:3:18:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:8:22:30 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:21 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:37 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:46 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:23:0%:44:1E0:35:23:9:14:23 0/0:0:0:0:0:35:0%:67:1E0:35:35:9:26:36 0/0:0:0:0:0:22:0%:40:1E0:35:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:35:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:23 0/0:0:0:0:0:25:0%:48:1E0:37:25:7:18:25 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:23 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:36:26:7:19:26 0/0:0:0:0:0:28:0%:51:1E0:36:28:9:19:28 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:22 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:20 0/0:0:0:0:0:16:0%:29:1E0:37:16:6:10:17 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:24 0/0:0:0:0:0:44:0%:81:1E0:36:44:19:25:44 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:18 0/0:0:0:0:0:29:0%:55:1E0:37:29:9:20:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:9:24:34 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:19 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:33 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:39 0/0:0:0:0:0:35:0%:67:1E0:36:35:16:19:36 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:23 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:41 0/0:0:0:0:0:43:0%:82:1E0:38:43:11:32:44 0/0:0:0:0:0:24:0%:44:1E0:36:24:8:16:24 MTB_anc 2374995 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|mpa_Rv2115c|gene2154|transcript|Transcript_gene2154|Coding|1/1|c.1296C>T|p.Asp432Asp|1296/1830|1296/1830|432/609||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2374995G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2374995G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:17:0%:33:1E0:52:17:10:7:17 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:48 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:23 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:17:0%:33:1E0:48:17:11:6:17 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:21 0/0:0:0:0:0:36:0%:66:1E0:50:36:14:22:36 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:22:0%:40:1E0:52:22:9:13:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:23 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:23:0%:44:1E0:51:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:37:0%:70:1E0:47:37:13:24:37 0/0:0:0:0:0:53:0%:99:1E0:46:53:27:26:53 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:13:0%:25:1E0:46:13:6:7:13 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:32 0/0:0:0:0:0:34:0%:62:1E0:50:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:68:0%:99:1E0:47:68:38:30:69 0/0:0:0:0:0:46:0%:85:1E0:49:46:22:24:46 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:16:7:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:23 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:35 0/0:0:0:0:0:18:0%:32:1E0:46:18:6:12:18 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:33 0/0:0:0:0:0:55:0%:99:1E0:47:55:25:30:55 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:27:0%:52:1E0:49:27:8:19:27 0/0:0:0:0:0:38:0%:70:1E0:49:38:22:16:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:43 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:34 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:47:35:20:15:35 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:41 0/0:0:0:0:0:22:0%:40:1E0:52:22:7:15:22 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:57:0%:99:1E0:44:57:26:31:58 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:29:0%:55:1E0:49:29:9:20:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:49:23:16:7:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:29 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:35 0/0:0:0:0:0:44:0%:81:1E0:44:44:27:17:45 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:40 0/0:0:0:0:0:51:0%:97:1E0:41:51:34:17:51 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:36 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:61:0%:99:1E0:43:61:35:26:61 0/0:0:0:0:0:62:0%:99:1E0:44:62:34:28:62 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:56:0%:99:1E0:41:56:28:28:57 0/0:0:0:0:0:58:0%:99:1E0:41:58:31:27:58 0/0:0:0:0:0:48:0%:89:1E0:39:48:24:24:50 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:46 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:51 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:41 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:39 0/0:0:0:0:0:50:0%:92:1E0:40:50:23:27:52 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:45 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:46 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:61:0%:99:1E0:41:61:32:29:64 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:46 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:43 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:45 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:36 0/0:0:0:0:0:53:0%:99:1E0:45:53:21:32:53 0/0:0:0:0:0:64:0%:99:1E0:41:64:28:36:64 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:39 MTB_anc 2376425 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|mpa_Rv2115c-lppK_Rv2116|gene2154-gene2155|intergenic_region|gene2154-gene2155|||n.2376425G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:51:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:28:11:40:97.5%:99:3.8137E-22:37:1:1:0:40 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:52:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:40:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 2379743 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|Rv2120c_Rv2120c-hisG_Rv2121c|gene2159-gene2160|intergenic_region|gene2159-gene2160|||n.2379743G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:47:33:14:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:57:37:20:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:18:6:12:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:17:7:10:18:94.44%:86:2.0936E-9:33:1:1:0:18 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:22:10:12:23:95.65%:99:4.7526E-13:0:0:0:0:24 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 2380240 . C A . PASS AC=2;AF=6.849e-03;AN=292;ANN=A|stop_gained|HIGH|hisG_Rv2121c|gene2160|transcript|Transcript_gene2160|Coding|1/1|c.421G>T|p.Glu141*|421/855|421/855|141/284||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2380240C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2380240C>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:3:0:3:27:11.11%:28:1.1792E-1:42:24:8:16:29 0/0:28:1:0:1:17:5.88%:24:5E-1:44:16:6:10:22 0/0:34:3:0:3:27:11.11%:28:1.1792E-1:40:24:11:13:31 0/0:0:0:0:0:12:0%:21:1E0:45:12:4:8:13 0/0:33:2:0:2:15:13.33%:16:2.4138E-1:37:13:4:9:16 0/0:34:3:0:3:20:15%:16:1.1538E-1:44:17:5:12:24 0/0:37:1:0:1:17:5.88%:24:5E-1:49:16:5:11:19 0/0:35:6:0:6:22:27.27%:9:1.057E-2:43:16:5:11:26 0/0:37:1:0:1:20:5%:27:5E-1:48:19:5:14:20 0/0:33:4:0:4:25:16%:21:5.4928E-2:42:21:11:10:26 0/0:34:2:0:2:13:15.38%:13:2.4E-1:46:11:4:7:15 0/0:34:5:0:5:25:20%:17:2.5076E-2:39:20:8:12:29 0/0:33:1:0:1:14:7.14%:17:5E-1:46:13:5:8:16 0/0:35:2:0:2:16:12.5%:15:2.4194E-1:42:14:4:10:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:32:1:0:1:23:4.35%:34:5E-1:47:22:6:16:25 0/0:35:4:0:4:15:26.67%:8:4.9808E-2:43:11:7:4:16 0/0:35:2:0:2:16:12.5%:15:2.4194E-1:41:14:4:10:16 0/0:27:1:0:1:15:6.67%:21:5E-1:44:14:8:6:17 0/0:33:2:0:2:12:16.67%:10:2.3913E-1:41:10:3:7:14 0/0:37:1:0:1:14:7.14%:17:5E-1:37:13:8:5:15 0/0:28:2:0:2:24:8.33%:27:2.4468E-1:41:22:10:12:28 0/0:35:4:0:4:22:18.18%:15:5.3885E-2:38:18:9:9:26 0/0:0:0:0:0:18:0%:32:1E0:44:18:6:12:23 0/0:34:2:0:2:10:20%:7:2.3684E-1:33:8:3:5:11 0/0:0:0:0:0:14:0%:25:1E0:42:14:2:12:15 0/0:37:1:0:1:10:10%:11:5E-1:33:9:5:4:15 0/0:34:2:0:2:12:16.67%:10:2.3913E-1:45:10:4:6:12 0/0:0:0:0:0:18:0%:32:1E0:42:18:5:13:19 0/0:34:2:0:2:17:11.76%:18:2.4242E-1:45:15:5:10:20 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:19 0/0:31:3:0:3:19:15.79%:17:1.1486E-1:42:16:5:11:19 0/0:38:4:0:4:13:30.77%:6:4.7826E-2:49:9:5:4:19 0/0:34:2:0:2:17:11.76%:18:2.4242E-1:37:15:10:5:18 0/0:36:2:0:2:20:10%:21:2.4359E-1:42:18:6:12:24 0/0:37:1:0:1:31:3.23%:48:5E-1:41:30:14:16:34 0/0:37:2:0:2:23:8.7%:28:2.4444E-1:42:21:8:13:24 0/1:33:9:0:9:37:24.32%:29:1.1256E-3:46:28:11:17:44 0/0:34:2:0:2:22:9.09%:24:2.4419E-1:40:20:6:14:24 0/0:37:3:0:3:23:13.04%:22:1.1667E-1:45:20:9:11:24 0/0:0:0:0:0:21:0%:40:1E0:43:21:3:18:23 0/0:39:1:0:1:23:4.35%:34:5E-1:40:22:7:15:27 0/0:31:3:0:3:16:18.75%:11:1.129E-1:42:13:2:11:16 0/0:33:2:0:2:21:9.52%:25:2.439E-1:39:19:5:14:22 0/0:0:0:0:0:19:0%:37:1E0:37:19:12:7:20 0/0:37:1:0:1:20:5%:27:5E-1:41:19:5:14:23 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:17 0/0:34:1:0:1:25:4%:38:5E-1:40:24:8:16:28 0/0:37:3:0:3:21:14.29%:19:1.1585E-1:42:18:5:13:21 0/0:35:4:0:4:24:16.67%:18:5.461E-2:43:20:7:13:25 0/0:36:5:0:5:16:31.25%:6:2.1691E-2:45:11:5:6:17 0/0:33:3:0:3:15:20%:11:1.1207E-1:47:12:2:10:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:0:1:21:4.76%:31:5E-1:45:20:7:13:22 0/0:35:2:0:2:15:13.33%:16:2.4138E-1:43:13:5:8:16 0/0:36:4:0:4:24:16.67%:18:5.461E-2:43:20:5:15:26 0/0:0:0:0:0:16:0%:29:1E0:41:16:2:14:19 0/0:34:1:0:1:19:5.26%:28:5E-1:41:18:7:11:21 0/0:35:5:0:5:27:18.52%:19:2.5527E-2:38:22:8:14:33 0/0:34:4:0:4:27:14.81%:23:5.5494E-2:42:23:10:13:33 0/0:32:1:0:1:28:3.57%:41:5E-1:43:27:9:18:28 0/0:30:4:0:4:26:15.38%:20:5.5222E-2:38:22:6:16:31 0/0:38:1:0:1:23:4.35%:34:5E-1:39:22:7:15:26 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:19 0/0:35:5:0:5:25:20%:17:2.5076E-2:41:20:7:13:26 0/1:34:7:0:7:25:28%:23:4.8126E-3:42:18:6:12:28 0/0:34:3:0:3:23:13.04%:22:1.1667E-1:44:20:11:9:24 0/0:35:2:0:2:23:8.7%:28:2.4444E-1:42:21:9:12:28 0/0:38:1:0:1:13:7.69%:18:5E-1:41:12:5:7:15 0/0:0:0:0:0:10:0%:17:1E0:43:10:3:7:11 0/0:31:4:0:4:26:15.38%:20:5.5222E-2:47:22:7:15:29 0/0:35:3:0:3:22:13.64%:19:1.1628E-1:42:19:10:9:27 0/0:28:3:0:3:22:13.64%:19:1.1628E-1:42:19:7:12:27 0/0:45:3:1:2:19:15.79%:17:1.1486E-1:46:16:4:12:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:26 0/0:0:0:0:0:12:0%:21:1E0:47:12:4:8:14 0/0:33:3:0:3:25:12%:25:1.1735E-1:42:22:5:17:28 0/0:29:5:0:5:28:17.86%:19:2.5729E-2:43:23:11:12:33 0/0:37:1:0:1:15:6.67%:21:5E-1:36:14:4:10:17 0/0:0:0:0:0:11:0%:22:1E0:42:11:6:5:12 0/0:33:3:0:3:16:18.75%:11:1.129E-1:44:13:3:10:16 0/0:0:0:0:0:25:0%:48:1E0:41:25:7:18:28 0/0:25:1:0:1:16:6.25%:21:5E-1:41:15:7:8:19 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:26 0/0:33:3:0:3:18:16.67%:14:1.1429E-1:39:15:7:8:19 0/0:39:1:0:1:15:6.67%:21:5E-1:44:14:4:10:18 0/0:0:0:0:0:18:0%:32:1E0:40:18:6:12:20 0/0:35:2:0:2:15:13.33%:16:2.4138E-1:39:13:4:9:17 0/0:35:2:0:2:24:8.33%:27:2.4468E-1:43:22:5:17:27 0/0:37:1:0:1:16:6.25%:21:5E-1:44:15:4:11:16 0/0:33:2:0:2:25:8%:31:2.449E-1:42:23:7:16:26 0/0:34:2:0:2:20:10%:21:2.4359E-1:45:18:8:10:22 0/0:37:4:0:4:22:18.18%:15:5.3885E-2:43:18:3:15:23 0/0:29:3:0:3:17:17.65%:14:1.1364E-1:40:14:5:9:18 0/0:32:3:0:3:25:12%:25:1.1735E-1:41:22:7:15:30 0/0:33:1:0:1:21:4.76%:31:5E-1:40:20:14:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:16:0%:29:1E0:46:16:4:12:19 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:16 0/0:34:3:0:3:19:15.79%:17:1.1486E-1:41:16:4:12:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:45:15:6:9:18 0/0:37:2:0:2:13:15.38%:13:2.4E-1:39:11:4:7:16 0/0:36:3:0:3:20:15%:16:1.1538E-1:37:17:7:10:22 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:9 0/0:32:1:0:1:18:5.56%:24:5E-1:43:17:6:11:20 0/0:32:2:0:2:13:15.38%:13:2.4E-1:43:11:3:8:14 0/0:37:2:0:2:20:10%:21:2.4359E-1:48:18:4:14:22 0/0:29:2:0:2:24:8.33%:27:2.4468E-1:37:22:8:14:24 0/0:37:3:0:3:17:17.65%:14:1.1364E-1:40:14:7:7:21 0/0:34:1:0:1:14:7.14%:17:5E-1:45:13:3:10:15 0/0:0:0:0:0:10:0%:17:1E0:43:10:2:8:10 0/0:34:1:0:1:17:5.88%:24:5E-1:40:16:2:14:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:6:17:27 0/0:38:1:0:1:15:6.67%:21:5E-1:40:14:6:8:19 0/0:35:4:0:4:27:14.81%:23:5.5494E-2:37:23:7:16:28 0/0:39:1:0:1:17:5.88%:24:5E-1:42:16:6:10:20 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:17 0/0:32:4:0:4:16:25%:8:5.0612E-2:44:12:4:8:17 0/0:37:2:0:2:25:8%:31:2.449E-1:44:23:7:16:26 0/0:34:6:0:6:34:17.65%:23:1.2287E-2:39:28:15:13:36 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:22 0/0:24:1:0:1:11:9.09%:14:5E-1:36:10:4:6:11 0/0:37:1:0:1:23:4.35%:34:5E-1:36:22:9:13:25 0/0:37:2:0:2:10:20%:7:2.3684E-1:36:8:4:4:10 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:23 0/0:36:3:0:3:14:21.43%:9:1.1111E-1:42:11:5:6:17 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/0:28:3:0:3:20:15%:16:1.1538E-1:41:17:6:11:20 0/0:33:2:0:2:19:10.53%:21:2.4324E-1:40:17:4:13:19 0/0:36:1:0:1:18:5.56%:24:5E-1:39:17:7:10:18 0/0:37:1:0:1:15:6.67%:21:5E-1:39:14:5:9:17 0/0:36:3:0:3:18:16.67%:14:1.1429E-1:39:15:7:8:19 0/0:36:2:0:2:12:16.67%:10:2.3913E-1:36:10:2:8:14 0/0:36:2:0:2:16:12.5%:15:2.4194E-1:39:14:7:7:16 0/0:39:1:0:1:18:5.56%:24:5E-1:37:17:5:12:19 0/0:34:4:1:3:33:12.12%:32:5.6777E-2:38:29:16:13:40 0/0:33:5:0:5:30:16.67%:21:2.6093E-2:40:25:14:11:33 0/0:37:1:0:1:21:4.76%:31:5E-1:43:20:13:7:23 0/0:35:3:0:3:22:13.64%:19:1.1628E-1:39:19:8:11:25 0/0:0:0:0:0:13:0%:25:1E0:40:13:11:2:16 0/0:37:1:0:1:14:7.14%:17:5E-1:36:13:5:8:14 0/0:33:3:0:3:19:15.79%:17:1.1486E-1:39:16:8:8:22 0/0:35:5:0:5:34:14.71%:27:2.6693E-2:39:29:10:19:37 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:19 0/0:29:3:0:3:12:25%:6:1.087E-1:39:9:6:3:14 0/0:36:2:0:2:21:9.52%:25:2.439E-1:38:19:9:10:23 0/0:36:4:1:3:28:14.29%:23:5.5746E-2:40:24:9:15:29 0/0:35:5:0:5:39:12.82%:35:2.7273E-2:41:34:11:23:46 0/0:24:1:0:1:20:5%:27:5E-1:42:19:4:15:21 MTB_anc 2387329 . A G . PASS AC=291;AF=0.997;AN=292;ANN=G|missense_variant|MODERATE|PE_PGRS37_Rv2126c|gene2165|transcript|Transcript_gene2165|Coding|1/1|c.644T>C|p.Val215Ala|644/771|644/771|215/256||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2387329A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2387329A>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:16 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:33:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:20:14:6:21:95.24%:99:7.2544E-12:0:0:0:0:27 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:16 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:40:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:33:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:43:19:7:12:20:95%:99:2.8292E-11:0:0:0:0:21 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:35:10:7:3:11:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:48:10:1:9:11:90.91%:52:5.4125E-6:0:0:0:0:11 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:24:12:12:25:96%:99:3.101E-14:0:0:0:0:26 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 0/1:36:8:4:4:9:88.89%:36:2.0568E-4:38:1:0:1:10 1/1:35:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:21:12:9:22:100%:99:1.8578E-12:0:0:0:0:23 1/1:34:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:39:10:8:2:11:90.91%:47:1.7011E-5:33:1:1:0:12 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:17 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:6:5:12:91.67%:58:1.4176E-6:0:0:0:0:14 1/1:34:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 MTB_anc 2388641 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|ansP1_Rv2127|gene2166|transcript|Transcript_gene2166|Coding|1/1|c.26A>G|p.Asp9Gly|26/1470|26/1470|9/489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2388641A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2388641A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:26:14:12:28:92.86%:99:5.6872E-14:37:2:2:0:28 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:73:38:35:73:100%:99:1.7006E-43:0:0:0:0:74 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:60:31:29:61:98.36%:99:1.035E-35:0:0:0:0:62 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:52:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:68:34:34:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:41:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:63:33:30:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 2390299 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv2128_Rv2128-Rv2129c_Rv2129c|gene2167-gene2168|intergenic_region|gene2167-gene2168|||n.2390299G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:53:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:47:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:55:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:52:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:27 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:15:12:28:96.43%:99:3.7915E-15:29:1:1:0:28 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 2392913 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|cysQ_Rv2131c|gene2170|transcript|Transcript_gene2170|Coding|1/1|c.408C>T|p.Asn136Asn|408/804|408/804|136/267||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2392913G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2392913G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:51 0/0:0:0:0:0:16:0%:29:1E0:39:16:5:11:16 0/0:0:0:0:0:48:0%:89:1E0:46:48:22:26:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:42 0/0:0:0:0:0:14:0%:25:1E0:51:14:7:7:15 0/0:0:0:0:0:49:0%:93:1E0:44:49:24:25:49 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:30 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:19 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:31 0/0:0:0:0:0:15:0%:29:1E0:40:15:7:8:15 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:39 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:13:0%:25:1E0:43:13:9:4:13 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:45 0/0:0:0:0:0:57:0%:99:1E0:45:57:29:28:57 0/1:51:8:6:2:39:20.51%:25:2.624E-3:44:31:17:14:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:39 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:34 0/0:0:0:0:0:17:0%:33:1E0:41:17:12:5:17 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:26:13:40 0/0:0:0:0:0:51:0%:97:1E0:42:51:32:19:52 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:32 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:21 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:50:0%:92:1E0:38:50:24:26:51 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:47 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:26 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:29 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:46 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:28 0/0:0:0:0:0:45:0%:85:1E0:48:45:21:24:45 0/0:0:0:0:0:53:0%:99:1E0:42:53:22:31:54 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:12:31:43 0/0:0:0:0:0:14:0%:25:1E0:44:14:6:8:16 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:25:0%:48:1E0:49:25:6:19:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:41 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:37 0/0:0:0:0:0:57:0%:99:1E0:44:57:27:30:59 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:36 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:17 0/0:0:0:0:0:22:0%:40:1E0:42:22:5:17:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:17 0/0:0:0:0:0:65:0%:99:1E0:41:65:29:36:65 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:55:0%:99:1E0:45:55:24:31:56 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:10:25:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:17 0/0:0:0:0:0:41:0%:78:1E0:48:41:18:23:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:15 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:34 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:35 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:29 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:48 0/0:0:0:0:0:55:0%:99:1E0:43:55:31:24:56 0/0:0:0:0:0:24:0%:44:1E0:44:24:6:18:27 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:19 0/0:0:0:0:0:35:0%:67:1E0:37:35:15:20:35 0/0:0:0:0:0:44:0%:81:1E0:38:44:26:18:47 0/0:0:0:0:0:49:0%:93:1E0:41:49:26:23:50 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:28 0/0:0:0:0:0:38:0%:70:1E0:40:38:13:25:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:45:0%:85:1E0:39:45:25:20:45 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:27 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:34 0/0:0:0:0:0:36:0%:66:1E0:39:36:24:12:36 0/0:0:0:0:0:40:0%:74:1E0:37:40:20:20:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:49 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 0/0:0:0:0:0:45:0%:85:1E0:39:45:18:27:45 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:40:33:10:23:34 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:19 0/0:0:0:0:0:33:0%:63:1E0:42:33:23:10:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:56:0%:99:1E0:41:56:33:23:56 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 MTB_anc 2397931 . TCG T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|frameshift_variant|HIGH|lppL_Rv2138|gene2177|transcript|Transcript_gene2177|Coding|1/1|c.609_610delCG|p.Val204fs|609/1077|609/1077|203/358||INFO_REALIGN_3_PRIME,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2397932_2397933delCG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2397932_2397933delCG||||||;HET=0;LOF=(lppL_Rv2138|gene2177|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:41:52:27:25:53 0/0:0:0:0:0:13:0%:25:1E0:47:13:9:4:13 0/0:0:0:0:0:56:0%:99:1E0:43:56:26:30:57 0/0:60:1:1:0:14:7.14%:17:5E-1:47:13:6:7:14 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:34 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:39 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:37 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:46:0%:85:1E0:45:46:28:18:46 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:18:0%:32:1E0:39:18:11:7:19 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:23 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:40 0/0:0:0:0:0:49:0%:93:1E0:46:49:25:24:49 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:44 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:41 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:43 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:47 0/0:0:0:0:0:46:0%:85:1E0:47:46:24:22:46 1/1:42:39:13:26:39:97.5%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:63:0%:99:1E0:44:63:31:32:63 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:48 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:38 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:24 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:42 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:43 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:53 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:25 0/0:0:0:0:0:54:0%:99:1E0:44:54:20:34:55 0/0:0:0:0:0:17:0%:33:1E0:48:17:7:10:17 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:37 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:42:0%:77:1E0:51:42:27:15:44 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:42 0/0:0:0:0:0:48:0%:89:1E0:44:48:19:29:49 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:47 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:42 0/0:0:0:0:0:53:0%:99:1E0:47:53:27:26:55 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:37:1:0:1:23:4.35%:34:5E-1:49:22:12:10:23 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:8:19:28 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:36 0/0:0:0:0:0:22:0%:40:1E0:52:22:12:10:22 0/0:0:0:0:0:28:0%:51:1E0:48:28:20:8:30 0/0:0:0:0:0:48:0%:89:1E0:39:48:24:24:49 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:66:0%:99:1E0:44:66:33:33:66 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:45 0/0:0:0:0:0:35:0%:67:1E0:49:35:23:12:35 0/0:0:0:0:0:44:0%:81:1E0:40:44:17:27:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:16:0%:29:1E0:45:16:5:11:17 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:42 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:22:0%:40:1E0:50:22:9:13:22 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:65:0%:99:1E0:45:65:31:34:67 0/0:0:0:0:0:38:0%:70:1E0:45:38:24:14:39 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:31 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:25 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:41 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:36 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:24 0/0:0:0:0:0:52:0%:96:1E0:45:52:28:24:53 0/0:0:0:0:0:54:0%:99:1E0:42:54:30:24:55 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:29 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:48:0%:89:1E0:38:48:26:22:50 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:40 0/0:0:0:0:0:51:0%:97:1E0:39:51:27:24:53 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:48 0/0:0:0:0:0:50:0%:92:1E0:40:50:25:25:53 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:44 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:34 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:35 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:19 0/0:0:0:0:0:49:0%:93:1E0:38:49:19:30:51 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:49:0%:93:1E0:39:49:22:27:49 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 0/0:0:0:0:0:49:0%:93:1E0:45:49:32:17:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:47 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 MTB_anc 2398456 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|intergenic_region|MODIFIER|lppL_Rv2138-pyrD_Rv2139|gene2177-gene2178|intergenic_region|gene2177-gene2178|||n.2398456C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:44 0/0:0:0:0:0:25:0%:48:1E0:50:25:13:12:25 0/0:0:0:0:0:43:0%:82:1E0:47:43:25:18:44 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:40 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:47 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:50:0%:92:1E0:42:50:23:27:50 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:22 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:42 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:21:10:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:39:1:0:1:37:2.7%:59:5E-1:42:36:24:12:37 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:38 0/0:0:0:0:0:67:0%:99:1E0:46:67:36:31:67 0/0:0:0:0:0:53:0%:99:1E0:45:53:28:25:55 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:41 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:23 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:42 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:39 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:46 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:32 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:25:0%:48:1E0:44:25:18:7:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:41 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:44:0%:81:1E0:41:44:29:15:45 0/0:0:0:0:0:47:0%:89:1E0:45:47:28:19:47 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:36:0%:66:1E0:45:36:24:12:36 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:55:0%:99:1E0:43:55:26:29:56 0/0:20:1:1:0:19:5.26%:28:5E-1:43:18:8:10:21 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:43 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:25 0/0:20:1:0:1:28:3.57%:41:5E-1:42:27:16:11:30 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:26:11:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:23:7:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:62:0%:99:1E0:41:62:34:28:62 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 0/0:0:0:0:0:38:0%:70:1E0:45:38:24:14:41 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:37 0/0:0:0:0:0:47:0%:89:1E0:42:47:30:17:47 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:41 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:19 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:13:26:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:33:0%:63:1E0:39:33:23:10:34 0/0:0:0:0:0:15:0%:29:1E0:50:15:10:5:17 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:16:7:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:32 0/0:0:0:0:0:24:0%:44:1E0:39:24:17:7:24 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:26:0%:47:1E0:37:26:17:9:28 0/0:0:0:0:0:47:0%:89:1E0:39:47:32:15:48 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:22 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:37 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:27 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:49 0/0:0:0:0:0:54:0%:99:1E0:43:54:32:22:57 0/0:0:0:0:0:18:0%:32:1E0:40:18:12:6:20 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:23 0/0:25:1:1:0:30:3.33%:44:5E-1:40:29:18:11:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:19:7:28 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:46 0/0:0:0:0:0:31:0%:59:1E0:39:31:20:11:31 0/0:0:0:0:0:57:0%:99:1E0:40:57:33:24:58 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:35 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:38 0/0:0:0:0:0:34:0%:62:1E0:38:34:23:11:37 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:25 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:20 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:28:14:46 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:35 MTB_anc 2401825 . T C . PASS AC=80;AF=0.267;AN=300;ANN=C|intergenic_region|MODIFIER|Rv2141c_Rv2141c-leuU_Rvnt22|gene2180-gene2181|intergenic_region|gene2180-gene2181|||n.2401825T>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:41:14:11:3:56:25%:46:2.416E-5:42:42:24:18:62 0/1:51:7:3:4:23:30.43%:23:4.5803E-3:47:16:8:8:25 0/1:45:25:10:15:63:39.68%:88:1.5062E-9:45:38:21:17:66 0/0:39:2:2:0:22:9.09%:24:2.4419E-1:40:20:8:12:22 0/1:46:9:6:3:28:32.14%:30:9.1169E-4:44:19:12:7:30 0/1:46:11:7:4:32:34.38%:37:1.7351E-4:44:21:13:8:36 0/0:37:1:1:0:27:3.7%:41:5E-1:47:26:15:11:27 0/1:41:16:8:8:38:42.11%:56:2.0535E-6:40:22:10:12:43 0/1:54:13:7:6:37:35.14%:44:3.404E-5:45:24:13:11:38 0/1:42:10:5:5:33:30.3%:33:4.3872E-4:42:23:14:9:39 0/0:37:2:0:2:36:5.56%:47:2.4638E-1:45:33:15:18:38 0/0:38:4:3:1:40:10%:40:5.7784E-2:43:36:16:20:40 0/1:50:7:4:3:16:43.75%:24:3.3988E-3:51:9:7:2:18 0/0:37:3:1:2:50:6%:63:1.2113E-1:45:46:26:20:51 0/0:35:2:0:2:26:7.69%:27:2.4468E-1:42:22:13:9:27 0/1:43:16:8:8:39:41.03%:56:2.1927E-6:50:23:10:13:42 0/1:36:14:3:11:31:45.16%:50:9.1194E-6:43:17:10:7:34 0/0:36:1:0:1:23:4.35%:34:5E-1:45:22:15:7:24 0/1:45:17:9:8:35:48.57%:62:5.7598E-7:43:18:7:11:38 0/0:54:5:3:2:24:20.83%:14:2.4823E-2:41:19:13:6:31 0/0:37:1:1:0:24:4.17%:34:5E-1:44:23:11:12:24 0/0:38:3:2:1:40:7.5%:46:1.2025E-1:44:37:16:21:40 0/1:49:11:8:3:39:28.21%:36:2.1547E-4:47:28:14:14:44 0/0:36:2:1:1:39:5.13%:54:2.4675E-1:44:37:29:8:39 0/1:45:10:6:4:29:34.48%:34:3.8387E-4:47:19:6:13:31 0/1:47:14:7:7:37:37.84%:48:1.3393E-5:45:23:14:9:40 0/0:38:1:1:0:21:4.76%:27:5E-1:43:19:12:7:22 0/1:43:9:5:4:30:30%:30:9.678E-4:46:21:8:13:32 0/1:54:9:4:5:35:25.71%:29:1.0857E-3:48:26:14:12:36 0/1:43:15:6:9:44:34.09%:51:7.2456E-6:41:29:21:8:46 0/0:27:2:1:1:24:8%:31:2.449E-1:44:23:8:15:25 0/1:47:7:6:1:27:25.93%:22:5.0143E-3:42:20:13:7:30 0/1:42:17:4:13:44:38.64%:59:1.1194E-6:46:27:14:13:48 0/1:40:11:6:5:35:31.43%:37:1.8662E-4:46:23:9:14:37 0/0:38:1:1:0:32:3.12%:48:5E-1:47:31:14:17:32 0/1:48:8:3:5:36:22.22%:25:2.5282E-3:43:28:10:18:37 0/1:43:19:7:12:50:38%:66:2.2975E-7:42:31:21:10:55 0/1:43:34:15:19:78:43.59%:99:5.6308E-13:44:44:31:13:83 0/1:38:16:7:9:45:35.56%:55:3.0122E-6:44:29:16:13:49 0/0:60:1:1:0:26:3.85%:38:5E-1:47:25:9:16:27 0/1:40:18:5:13:49:36.73%:62:5.6162E-7:40:31:19:12:55 0/1:41:25:9:16:58:43.1%:90:9.9959E-10:44:32:20:12:64 0/1:48:15:8:7:40:37.5%:52:6.0618E-6:44:25:14:11:44 0/1:41:9:5:4:41:21.95%:29:1.1955E-3:44:32:23:9:45 0/0:45:3:2:1:37:8.11%:43:1.1986E-1:42:34:15:19:39 0/1:41:15:8:7:49:30.61%:50:8.6234E-6:45:34:15:19:54 0/1:39:11:7:4:39:28.21%:36:2.1547E-4:46:28:16:12:44 0/0:37:1:0:1:48:2.08%:76:5E-1:41:47:26:21:50 0/0:39:1:0:1:30:3.33%:44:5E-1:43:29:10:19:30 0/1:44:15:6:9:42:35.71%:51:6.6622E-6:49:27:15:12:45 0/1:48:8:7:1:24:33.33%:27:1.949E-3:48:16:11:5:28 0/0:39:2:0:2:37:5.41%:47:2.4648E-1:45:34:15:19:37 0/0:37:1:1:0:17:5.88%:24:5E-1:53:16:8:8:20 0/0:36:3:1:2:25:12%:22:1.1667E-1:47:20:12:8:26 0/0:37:3:0:3:21:14.29%:19:1.1585E-1:42:18:14:4:21 0/0:39:3:1:2:33:9.09%:37:1.1923E-1:41:30:15:15:34 0/1:43:7:2:5:31:22.58%:22:5.3469E-3:42:24:12:12:36 0/0:37:1:1:0:24:4.17%:34:5E-1:43:23:15:8:24 0/0:27:2:1:1:43:4.55%:60:2.4713E-1:43:42:27:15:44 0/0:39:1:0:1:32:3.12%:48:5E-1:46:31:22:9:34 0/1:45:16:4:12:39:41.03%:56:2.1927E-6:45:23:12:11:42 0/0:37:2:1:1:32:6.25%:40:2.4603E-1:44:30:14:16:32 0/0:38:2:1:1:31:6.45%:40:2.459E-1:42:29:18:11:31 0/1:43:18:7:11:42:42.86%:64:3.7193E-7:42:24:15:9:46 0/1:39:18:9:9:46:39.13%:63:4.7997E-7:47:28:18:10:51 0/0:45:3:2:1:44:6.82%:53:1.2059E-1:45:40:24:16:45 0/0:37:1:1:0:41:2.44%:66:5E-1:42:40:21:19:42 0/0:38:1:1:0:25:4%:38:5E-1:42:24:13:11:25 0/0:45:6:2:4:23:26.09%:11:1.0777E-2:49:17:5:12:25 0/0:37:2:0:2:22:9.09%:25:2.439E-1:49:19:11:8:22 0/1:41:17:6:11:43:39.53%:59:1.0581E-6:47:26:14:12:44 0/1:44:14:7:7:35:40%:49:1.2005E-5:46:21:11:10:38 0/1:36:8:3:5:25:32%:26:2.0146E-3:48:17:8:9:30 0/0:0:0:0:0:42:0%:77:1E0:49:42:23:19:44 0/0:38:1:1:0:37:2.7%:59:5E-1:43:36:19:17:39 0/1:41:18:8:10:38:47.37%:65:2.68E-7:47:20:8:12:39 0/0:37:1:0:1:28:3.57%:41:5E-1:42:26:17:9:28 0/1:42:19:4:15:45:42.22%:67:1.6979E-7:45:26:15:11:47 0/0:39:2:2:0:35:5.71%:43:2.4627E-1:43:32:18:14:36 0/0:49:2:1:1:34:5.88%:43:2.4627E-1:45:32:17:15:35 0/1:40:12:4:8:38:31.58%:40:8.4418E-5:43:25:16:9:43 0/1:47:8:6:2:38:21.05%:25:2.5935E-3:41:30:14:16:45 0/1:41:10:3:7:51:19.61%:32:5.9987E-4:42:41:24:17:59 0/0:39:1:0:1:26:3.85%:38:5E-1:46:25:10:15:26 0/1:41:17:10:7:46:36.96%:59:1.2413E-6:45:29:12:17:51 0/0:32:2:1:1:28:7.14%:34:2.4528E-1:41:25:16:9:29 0/1:42:16:11:5:34:47.06%:58:1.4997E-6:43:18:9:9:37 0/1:40:7:1:6:33:21.21%:22:5.4855E-3:45:26:18:8:37 0/1:41:10:6:4:31:32.26%:33:4.1251E-4:48:21:9:12:32 0/1:43:7:3:4:23:30.43%:23:4.5803E-3:47:16:12:4:24 0/1:46:17:8:9:42:40.48%:60:9.9678E-7:41:25:13:12:50 0/1:47:9:7:2:27:33.33%:30:8.8132E-4:50:18:11:7:28 0/1:42:21:12:9:54:38.89%:73:4.2301E-8:43:33:14:19:61 0/0:38:2:0:2:30:6.67%:37:2.4576E-1:45:28:13:15:30 0/0:33:3:0:3:41:7.32%:50:1.2037E-1:44:38:20:18:45 0/1:41:11:6:5:30:36.67%:37:1.594E-4:41:19:13:6:33 0/1:43:13:10:3:43:30.23%:43:4.0777E-5:43:29:12:17:51 0/1:40:12:6:6:42:28.57%:40:9.7866E-5:44:30:15:15:45 0/1:38:16:7:9:47:34.04%:54:3.2755E-6:43:31:18:13:48 0/1:37:13:5:8:38:34.21%:44:3.5456E-5:41:25:14:11:42 0/1:37:7:2:5:24:29.17%:23:4.7006E-3:46:17:8:9:26 0/0:39:1:1:0:22:4.55%:31:5E-1:50:21:9:12:23 0/1:40:14:9:5:34:41.18%:49:1.1295E-5:41:20:12:8:42 0/0:38:1:0:1:21:4.76%:27:5E-1:40:19:10:9:21 0/1:49:9:4:5:24:37.5%:31:7.7962E-4:50:15:3:12:26 0/0:34:1:1:0:29:3.45%:41:5E-1:44:27:17:10:29 0/1:37:11:9:2:26:42.31%:38:1.2791E-4:42:15:8:7:28 0/1:43:18:7:11:41:43.9%:64:3.454E-7:46:23:13:10:45 0/1:40:13:8:5:39:33.33%:44:3.6837E-5:42:26:16:10:44 0/0:38:2:1:1:19:10.53%:21:2.4324E-1:40:17:10:7:19 0/1:42:15:9:6:44:34.09%:51:7.2456E-6:44:29:18:11:48 0/0:38:2:1:1:22:9.09%:25:2.439E-1:44:19:10:9:22 0/0:39:1:1:0:20:5%:27:5E-1:42:19:4:15:22 0/0:49:2:0:2:25:8%:31:2.449E-1:45:23:15:8:26 0/1:39:13:7:6:45:28.89%:43:4.4424E-5:42:32:18:14:52 0/0:43:4:3:1:38:10.53%:38:5.7399E-2:39:33:23:10:38 0/1:38:18:9:9:49:36.73%:62:5.6162E-7:39:31:14:17:54 0/1:42:18:8:10:48:37.5%:62:5.3443E-7:42:30:20:10:53 0/0:38:3:0:3:22:13.64%:19:1.1628E-1:40:19:12:7:23 0/0:31:5:1:4:59:8.33%:65:2.8658E-2:40:55:28:27:63 0/0:38:2:2:0:43:4.65%:60:2.4706E-1:38:41:26:15:44 0/0:38:1:1:0:25:4%:38:5E-1:42:24:9:15:25 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:40:15:9:6:17 0/0:37:2:1:1:39:5.13%:54:2.4675E-1:40:37:20:17:40 0/1:38:16:10:6:56:28.57%:53:4.3766E-6:42:40:14:26:61 0/0:37:1:0:1:34:2.94%:52:5E-1:42:32:16:16:35 0/1:41:16:7:9:52:30.77%:54:3.905E-6:39:36:24:12:58 0/0:38:5:3:2:37:13.51%:32:2.706E-2:41:32:10:22:40 0/1:39:18:10:8:50:36%:62:5.6162E-7:39:31:13:18:56 0/0:38:2:1:1:43:4.65%:57:2.4699E-1:40:40:15:25:44 0/1:36:10:5:5:43:23.26%:32:5.4148E-4:40:33:14:19:52 0/0:33:1:0:1:37:2.7%:59:5E-1:40:36:15:21:37 0/1:39:16:11:5:41:39.02%:56:2.4696E-6:40:25:13:12:47 0/0:38:2:2:0:25:8%:31:2.449E-1:40:23:15:8:25 0/0:39:2:1:1:25:8%:31:2.449E-1:39:23:15:8:26 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:43:30:15:15:33 0/0:39:1:1:0:52:1.92%:84:5E-1:41:50:20:30:54 0/1:47:19:10:9:57:33.33%:65:3.1469E-7:43:38:28:10:59 0/1:43:17:5:12:47:36.17%:58:1.3018E-6:39:30:18:12:54 0/0:39:2:0:2:37:5.41%:47:2.4648E-1:41:34:19:15:38 0/1:39:11:5:6:46:23.91%:36:2.4398E-4:42:34:16:18:49 0/1:46:13:7:6:35:37.14%:45:3.1103E-5:40:22:14:8:44 0/1:40:19:9:10:53:35.85%:65:2.6625E-7:43:34:16:18:57 0/0:48:2:2:0:27:7.41%:30:2.451E-1:45:24:10:14:27 0/1:42:20:9:11:47:42.55%:71:7.2254E-8:40:27:15:12:56 0/0:38:1:1:0:22:4.55%:31:5E-1:43:21:12:9:22 0/0:44:4:2:2:35:11.43%:31:5.6946E-2:41:30:19:11:35 0/1:37:19:5:14:46:41.3%:67:1.8161E-7:40:27:18:9:52 0/0:36:5:2:3:43:11.63%:41:2.764E-2:41:38:15:23:44 0/0:25:2:0:2:32:6.06%:44:2.4615E-1:40:31:19:12:33 MTB_anc 2403375 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv2143_Rv2143|gene2184|transcript|Transcript_gene2184|Coding|1/1|c.399G>T|p.Arg133Arg|399/1059|399/1059|133/352||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2403375G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2403375G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:22:18:41:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:60:28:32:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:57:32:25:58:98.28%:99:9.6072E-33:36:1:1:0:58 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:53:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:30:12:18:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:52:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:36:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:38:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:51:30:21:52:98.08%:99:3.3479E-29:60:1:0:1:53 1/1:40:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2406186 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2147c_Rv2147c|gene2188|transcript|Transcript_gene2188|Coding|1/1|c.658G>A|p.Ala220Thr|658/726|658/726|220/241||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2406186C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2406186C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:20:20:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:37:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:24:12:12:25:96%:99:2.0568E-13:39:1:1:0:25 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 2407000 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv2148c_Rv2148c|gene2189|transcript|Transcript_gene2189|Coding|1/1|c.617G>A|p.Arg206Gln|617/777|617/777|206/258||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2407000C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2407000C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:0:1:41:2.44%:66:5E-1:44:40:17:23:41 0/0:0:0:0:0:15:0%:29:1E0:49:15:7:8:15 0/0:0:0:0:0:60:0%:99:1E0:45:60:31:29:61 0/0:0:0:0:0:36:0%:66:1E0:48:36:23:13:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:17:0%:33:1E0:45:17:12:5:17 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:33 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:32:0%:59:1E0:50:32:12:20:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:35 0/0:0:0:0:0:45:0%:85:1E0:45:45:17:28:46 0/0:0:0:0:0:20:0%:36:1E0:51:20:10:10:20 0/0:0:0:0:0:45:0%:85:1E0:47:45:23:22:45 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:37 0/0:0:0:0:0:24:0%:44:1E0:48:24:8:16:24 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:15 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:51:0%:97:1E0:46:51:24:27:51 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:44:0%:81:1E0:47:44:26:18:44 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:35 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 0/0:0:0:0:0:43:0%:82:1E0:50:43:18:25:45 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:67:0%:99:1E0:48:67:33:34:67 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:53:0%:99:1E0:43:53:24:29:53 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:49:0%:93:1E0:44:49:22:27:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:38 0/0:0:0:0:0:39:0%:74:1E0:48:39:18:21:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:39 0/0:0:0:0:0:17:0%:33:1E0:47:17:11:6:17 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:30:0%:55:1E0:52:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:35:1:0:1:48:2.08%:76:5E-1:44:47:24:23:48 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:20 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:60:1:1:0:46:2.17%:73:5E-1:47:45:22:23:46 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:27:13:41 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:50:0%:92:1E0:45:50:22:28:50 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:37 0/0:0:0:0:0:30:0%:55:1E0:51:30:18:12:30 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:51 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:37:0%:70:1E0:46:37:27:10:38 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:42 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:43 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:29 0/0:0:0:0:0:42:0%:77:1E0:50:42:23:19:43 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:20 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:43 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:51:0%:97:1E0:44:51:24:27:52 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:12:27:40 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:38 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:13:30:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:29 0/0:0:0:0:0:10:0%:17:1E0:50:10:7:3:10 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:23 0/0:0:0:0:0:28:0%:51:1E0:51:28:17:11:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:40 0/0:0:0:0:0:57:0%:99:1E0:42:57:35:22:58 0/0:0:0:0:0:24:0%:44:1E0:41:24:17:7:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:70:0%:99:1E0:45:70:34:36:71 0/0:0:0:0:0:64:0%:99:1E0:42:64:29:35:64 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:26 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:48 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:41 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:29 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:44 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:43 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:11:24:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:61:0%:99:1E0:41:61:36:25:61 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:14:30:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:35 0/0:0:0:0:0:51:0%:97:1E0:44:51:34:17:51 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:44 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 MTB_anc 2408010 . G T . PASS AC=26;AF=0.087;AN=300;ANN=T|missense_variant|MODERATE|yfiH_Rv2149c|gene2190|transcript|Transcript_gene2190|Coding|1/1|c.365C>A|p.Ala122Glu|365/753|365/753|122/250||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2408010G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2408010G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:37:40:22:18:41 0/0:0:0:0:0:11:0%:22:1E0:44:11:5:6:11 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:44 0/0:0:0:0:0:12:0%:21:1E0:40:12:6:6:13 0/0:0:0:0:0:15:0%:29:1E0:37:15:10:5:15 0/0:0:0:0:0:33:0%:63:1E0:37:33:16:17:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:18 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:24 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:27 0/0:0:0:0:0:21:0%:40:1E0:39:21:16:5:23 0/0:0:0:0:0:32:0%:59:1E0:38:32:21:11:33 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:11 0/0:37:1:1:0:35:2.86%:55:5E-1:38:34:22:12:39 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:36:25:11:38:94.74%:99:1.1316E-19:34:2:0:2:41 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:17 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:16 0/0:0:0:0:0:17:0%:33:1E0:40:17:11:6:17 1/1:35:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:42 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:23:0%:44:1E0:37:23:14:9:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:31 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:19 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:11 0/0:0:0:0:0:11:0%:22:1E0:42:11:4:7:11 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:26 0/0:37:1:1:0:26:3.85%:38:5E-1:40:25:15:10:27 0/0:0:0:0:0:41:0%:78:1E0:39:41:20:21:42 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 0/0:0:0:0:0:23:0%:44:1E0:40:23:16:7:24 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:26 1/1:37:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:31 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:22 0/0:0:0:0:0:53:0%:99:1E0:40:53:34:19:53 0/0:0:0:0:0:36:0%:66:1E0:39:36:25:11:36 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:29 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:20 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:42 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:33 1/1:40:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:41:0%:78:1E0:38:41:24:17:42 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:26 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:47 0/0:0:0:0:0:14:0%:25:1E0:44:14:7:7:15 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:38 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:24 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:47 0/0:0:0:0:0:30:0%:55:1E0:35:30:18:12:30 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:22 0/0:0:0:0:0:40:0%:74:1E0:38:40:24:16:44 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:24 0/0:0:0:0:0:28:0%:51:1E0:36:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:35 0/0:0:0:0:0:18:0%:32:1E0:37:18:12:6:21 0/0:0:0:0:0:28:0%:51:1E0:37:28:18:10:28 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:47 0/0:0:0:0:0:22:0%:40:1E0:39:22:16:6:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:36 0/0:0:0:0:0:12:0%:21:1E0:43:12:8:4:14 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:13:0%:25:1E0:42:13:7:6:13 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:31 0/0:0:0:0:0:42:0%:77:1E0:38:42:26:16:43 0/0:0:0:0:0:26:0%:47:1E0:36:26:17:9:27 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:45 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:34 0/0:0:0:0:0:28:0%:51:1E0:38:28:19:9:29 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:31 0/0:0:0:0:0:54:0%:99:1E0:38:54:30:24:59 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 1/1:37:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:17 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:30 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:17 0/0:0:0:0:0:26:0%:47:1E0:40:26:6:20:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:28:0%:51:1E0:36:28:19:9:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:23 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:31 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:27 0/0:0:0:0:0:15:0%:29:1E0:36:15:12:3:15 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:31 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:21 0/0:0:0:0:0:25:0%:48:1E0:38:25:18:7:27 0/0:0:0:0:0:13:0%:25:1E0:41:13:10:3:15 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:23 0/0:0:0:0:0:32:0%:59:1E0:36:32:19:13:32 0/0:0:0:0:0:26:0%:47:1E0:36:26:21:5:26 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:19 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:20 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:31:0%:59:1E0:36:31:18:13:31 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:37:21:13:8:22 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:38 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:22 0/0:0:0:0:0:26:0%:47:1E0:35:26:15:11:29 0/0:0:0:0:0:19:0%:37:1E0:36:19:15:4:20 0/0:0:0:0:0:18:0%:32:1E0:37:18:15:3:21 0/0:0:0:0:0:11:0%:22:1E0:35:11:9:2:14 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:43 0/0:0:0:0:0:44:0%:81:1E0:38:44:18:26:45 0/0:0:0:0:0:25:0%:48:1E0:36:25:14:11:26 0/0:0:0:0:0:10:0%:17:1E0:35:10:6:4:10 0/0:0:0:0:0:30:0%:55:1E0:35:30:22:8:34 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 0/0:0:0:0:0:24:0%:44:1E0:35:24:19:5:25 0/0:0:0:0:0:24:0%:44:1E0:33:24:19:5:25 0/0:38:1:0:1:22:4.55%:31:5E-1:36:21:14:7:27 0/0:0:0:0:0:31:0%:59:1E0:35:31:18:13:33 1/1:36:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:41 0/0:0:0:0:0:15:0%:29:1E0:36:15:10:5:19 0/0:0:0:0:0:30:0%:55:1E0:35:30:17:13:31 0/0:0:0:0:0:16:0%:29:1E0:34:16:12:4:19 0/0:0:0:0:0:32:0%:59:1E0:36:32:21:11:32 0/0:0:0:0:0:16:0%:29:1E0:37:16:14:2:19 0/0:0:0:0:0:21:0%:40:1E0:36:21:16:5:24 0/0:0:0:0:0:36:0%:66:1E0:36:36:27:9:38 0/0:0:0:0:0:31:0%:59:1E0:36:31:24:7:34 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:24 0/0:0:0:0:0:39:0%:74:1E0:38:39:28:11:40 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:25 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:18 0/0:0:0:0:0:36:0%:66:1E0:38:36:22:14:36 0/0:0:0:0:0:35:0%:67:1E0:38:35:20:15:37 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:26 0/0:0:0:0:0:34:0%:62:1E0:39:34:24:10:36 0/0:0:0:0:0:33:0%:63:1E0:37:33:23:10:35 0/0:0:0:0:0:28:0%:51:1E0:34:28:21:7:28 MTB_anc 2408695 . G A . PASS AC=5;AF=0.017;AN=300;ANN=A|missense_variant|MODERATE|ftsZ_Rv2150c|gene2191|transcript|Transcript_gene2191|Coding|1/1|c.830C>T|p.Ser277Leu|830/1140|830/1140|277/379||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2408695G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2408695G>A||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:38:41:11:30:42 0/0:0:0:0:0:14:0%:25:1E0:45:14:4:10:15 0/0:0:0:0:0:52:0%:96:1E0:40:52:21:31:54 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:18 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:21 0/0:0:0:0:0:47:0%:89:1E0:40:47:15:32:47 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:20:0%:36:1E0:38:20:3:17:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:20 0/0:0:0:0:0:32:0%:59:1E0:40:32:10:22:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:27 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:31 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:13:0%:25:1E0:44:13:4:9:13 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:56:0%:99:1E0:40:56:28:28:57 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:52:0%:96:1E0:39:52:29:23:53 0/0:39:1:1:0:34:2.94%:51:5E-1:38:33:9:24:34 0/0:0:0:0:0:45:0%:85:1E0:39:45:21:24:46 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:7:17:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:37 0/0:39:1:0:1:34:2.94%:51:5E-1:40:33:13:20:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:37 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:37 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:38 0/0:39:1:0:1:40:2.5%:62:5E-1:41:39:17:22:40 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:12 0/0:0:0:0:0:41:0%:78:1E0:39:41:14:27:42 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:8:22:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:29 0/0:0:0:0:0:47:0%:89:1E0:38:47:18:29:47 0/0:0:0:0:0:44:0%:81:1E0:41:44:15:29:44 1/1:42:18:8:10:19:94.74%:92:5.6585E-10:38:1:0:1:19 0/0:0:0:0:0:40:0%:74:1E0:40:40:14:26:40 0/0:38:1:1:0:30:3.33%:44:5E-1:42:29:14:15:30 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:48:0%:89:1E0:41:48:22:26:49 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:14:0%:25:1E0:47:14:5:9:14 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:41 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:37 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:39:0%:74:1E0:38:39:19:20:40 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:8:21:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:39:1:1:0:45:2.22%:73:5E-1:38:44:13:31:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:44:0%:81:1E0:38:44:19:25:44 0/0:60:1:1:0:20:5%:27:5E-1:39:19:8:11:20 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:26 0/0:0:0:0:0:22:0%:40:1E0:36:22:15:7:22 0/0:0:0:0:0:26:0%:47:1E0:39:26:7:19:26 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:30 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:26 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:17 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:39:25:8:17:25 0/0:38:1:1:0:37:2.7%:59:5E-1:42:36:15:21:37 0/0:0:0:0:0:33:0%:63:1E0:39:33:12:21:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:38 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:20 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:25 0/0:0:0:0:0:37:0%:70:1E0:37:37:20:17:38 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:17:7:24 0/0:0:0:0:0:27:0%:52:1E0:36:27:17:10:29 0/0:0:0:0:0:45:0%:85:1E0:38:45:14:31:45 0/0:0:0:0:0:43:0%:82:1E0:37:43:17:26:43 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:19 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:35 0/1:41:8:4:4:40:20%:25:2.653E-3:37:32:14:18:42 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:42 0/0:0:0:0:0:33:0%:63:1E0:37:33:13:20:34 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:28 1/1:38:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:38:34:17:17:36 0/0:0:0:0:0:44:0%:81:1E0:39:44:19:25:44 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:37:32:14:18:33 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:29 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:32 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 0/0:0:0:0:0:34:0%:62:1E0:38:34:17:17:34 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:34 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:23 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:41:0%:78:1E0:38:41:17:24:41 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:31 MTB_anc 2411107 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|murC_Rv2152c|gene2193|transcript|Transcript_gene2193|Coding|1/1|c.1016G>T|p.Cys339Phe|1016/1485|1016/1485|339/494||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2411107C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2411107C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:49 0/0:0:0:0:0:17:0%:33:1E0:48:17:12:5:17 0/0:0:0:0:0:48:0%:89:1E0:48:48:25:23:48 0/0:0:0:0:0:32:0%:59:1E0:46:32:24:8:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:20 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:25 0/0:0:0:0:0:42:0%:77:1E0:48:42:21:21:42 0/0:0:0:0:0:26:0%:47:1E0:49:26:21:5:26 0/0:0:0:0:0:36:0%:66:1E0:50:36:13:23:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:32 0/0:0:0:0:0:12:0%:21:1E0:49:12:7:5:12 0/0:0:0:0:0:50:0%:92:1E0:48:50:23:27:50 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:49:36:11:25:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:33 0/0:0:0:0:0:28:0%:51:1E0:49:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:56:0%:99:1E0:44:56:28:28:56 0/0:60:1:0:1:29:3.45%:45:5E-1:47:28:15:13:30 0/0:0:0:0:0:34:0%:62:1E0:48:34:22:12:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:39:0%:74:1E0:50:39:15:24:39 0/0:0:0:0:0:49:0%:93:1E0:44:49:29:20:49 0/0:0:0:0:0:51:0%:97:1E0:40:51:29:22:51 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:45:0%:85:1E0:46:45:27:18:45 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:63:0%:99:1E0:48:63:36:27:63 1/1:48:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:47 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:24 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:19 0/0:0:0:0:0:44:0%:81:1E0:46:44:24:20:44 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:52 0/0:0:0:0:0:32:0%:59:1E0:45:32:23:9:33 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:45 0/0:0:0:0:0:37:0%:70:1E0:49:37:17:20:37 0/0:0:0:0:0:28:0%:51:1E0:47:28:20:8:28 0/0:33:1:0:1:46:2.17%:73:5E-1:43:45:19:26:47 0/0:0:0:0:0:23:0%:44:1E0:51:23:10:13:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:53:0%:99:1E0:43:53:22:31:53 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:50 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:39:1:1:0:42:2.38%:66:5E-1:46:41:23:18:42 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:45 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:39 0/0:0:0:0:0:47:0%:89:1E0:45:47:26:21:48 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:35 0/0:0:0:0:0:53:0%:99:1E0:47:53:26:27:54 0/0:0:0:0:0:34:0%:62:1E0:50:34:18:16:34 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:24 0/0:0:0:0:0:22:0%:40:1E0:50:22:13:9:22 0/0:0:0:0:0:33:0%:63:1E0:48:33:21:12:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:28 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:24:13:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:50:0%:92:1E0:44:50:30:20:50 0/0:0:0:0:0:35:0%:67:1E0:45:35:23:12:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:40 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:40 0/0:0:0:0:0:22:0%:40:1E0:53:22:11:11:23 0/0:0:0:0:0:31:0%:59:1E0:44:31:22:9:31 0/0:0:0:0:0:29:0%:55:1E0:50:29:11:18:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:22 0/0:0:0:0:0:55:0%:99:1E0:42:55:28:27:55 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:36 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:50 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:7:21:28 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:33 0/0:0:0:0:0:26:0%:47:1E0:49:26:10:16:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:43 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:25:13:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 0/0:0:0:0:0:59:0%:99:1E0:43:59:28:31:59 0/0:30:1:1:0:33:3.03%:52:5E-1:41:32:16:16:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:56:0%:99:1E0:39:56:30:26:57 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:41 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:45:0%:85:1E0:42:45:30:15:45 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:48 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:39 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:39 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:44 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 0/0:60:1:0:1:30:3.33%:44:5E-1:43:29:16:13:31 0/0:0:0:0:0:56:0%:99:1E0:38:56:30:26:56 0/0:0:0:0:0:57:0%:99:1E0:43:57:33:24:58 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:48 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:33 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:48 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:39:0%:74:1E0:50:39:21:18:39 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:46 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 MTB_anc 2411110 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|murC_Rv2152c|gene2193|transcript|Transcript_gene2193|Coding|1/1|c.1013C>T|p.Thr338Ile|1013/1485|1013/1485|338/494||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2411110G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2411110G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:43:51:29:22:51 0/0:0:0:0:0:18:0%:32:1E0:49:18:12:6:18 0/0:0:0:0:0:48:0%:89:1E0:48:48:26:22:48 0/0:60:1:0:1:32:3.12%:48:5E-1:45:31:24:7:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:18:7:25 0/0:0:0:0:0:42:0%:77:1E0:48:42:21:21:43 0/0:0:0:0:0:26:0%:47:1E0:49:26:21:5:26 0/0:0:0:0:0:37:0%:70:1E0:49:37:14:23:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:14:0%:25:1E0:50:14:7:7:14 0/0:0:0:0:0:51:0%:97:1E0:48:51:23:28:51 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:31 0/0:0:0:0:0:37:0%:70:1E0:47:37:12:25:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:33 0/0:0:0:0:0:28:0%:51:1E0:49:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:31 0/0:0:0:0:0:56:0%:99:1E0:44:56:28:28:56 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:33:0%:63:1E0:48:33:21:12:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:32:0%:59:1E0:47:32:22:10:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:39:0%:74:1E0:50:39:15:24:39 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:50 0/0:0:0:0:0:50:0%:92:1E0:40:50:28:22:52 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:45:0%:85:1E0:45:45:27:18:45 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:41 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:61:0%:99:1E0:48:61:34:27:61 1/1:49:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:47 0/0:0:0:0:0:23:0%:44:1E0:45:23:7:16:24 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:43:0%:82:1E0:45:43:25:18:44 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:37 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:50 0/0:0:0:0:0:32:0%:59:1E0:46:32:22:10:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:40 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:38:0%:70:1E0:49:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:49:26:18:8:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:46 0/0:0:0:0:0:24:0%:44:1E0:49:24:11:13:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:27 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:25 0/0:0:0:0:0:52:0%:96:1E0:43:52:21:31:53 0/0:0:0:0:0:50:0%:92:1E0:45:50:24:26:52 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:43:0%:82:1E0:46:43:25:18:43 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:45 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:39 0/0:0:0:0:0:46:0%:85:1E0:45:46:25:21:47 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:54:0%:99:1E0:46:54:28:26:55 0/0:0:0:0:0:34:0%:62:1E0:50:34:19:15:34 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:23 0/0:0:0:0:0:33:0%:63:1E0:47:33:21:12:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:34:0%:62:1E0:50:34:16:18:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:51:0%:97:1E0:44:51:31:20:51 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:23 0/0:24:1:1:0:41:2.44%:66:5E-1:46:40:16:24:41 0/0:0:0:0:0:23:0%:44:1E0:53:23:11:12:24 0/0:30:1:1:0:31:3.23%:48:5E-1:44:30:20:10:32 0/0:0:0:0:0:30:0%:55:1E0:50:30:12:18:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:57:0%:99:1E0:42:57:30:27:57 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:48 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:19:0%:37:1E0:51:19:9:10:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:7:22:29 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:33 0/0:0:0:0:0:26:0%:47:1E0:49:26:10:16:26 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:45 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:44 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:19 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:17 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:38 0/0:0:0:0:0:38:0%:70:1E0:39:38:24:14:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:26:13:39 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 0/0:0:0:0:0:55:0%:99:1E0:43:55:24:31:56 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:28 0/0:0:0:0:0:55:0%:99:1E0:39:55:28:27:58 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:37 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:45 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:47 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:39 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:43 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:54:0%:99:1E0:37:54:29:25:56 0/0:0:0:0:0:60:0%:99:1E0:43:60:34:26:60 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:49 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:32 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:40:0%:74:1E0:49:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 MTB_anc 2413246 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|murG_Rv2153c|gene2194|transcript|Transcript_gene2194|Coding|1/1|c.106T>G|p.Leu36Val|106/1233|106/1233|36/410||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2413246A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2413246A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:52:39:13:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:35 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:31:18:13:32:96.88%:99:1.8007E-17:60:1:0:1:35 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:24:15:9:25:96%:99:3.101E-14:0:0:0:0:25 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:55:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:49:31:18:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:31:17:14:32:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:37:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 2414484 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|ftsW_Rv2154c|gene2195|transcript|Transcript_gene2195|Coding|1/1|c.439A>C|p.Asn147His|439/1575|439/1575|147/524||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.2414484T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2414484T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:39:42:34:8:42 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:45:0%:85:1E0:43:45:30:15:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:26 0/0:0:0:0:0:10:0%:17:1E0:48:10:8:2:10 0/0:0:0:0:0:43:0%:82:1E0:41:43:28:15:45 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:21 0/0:0:0:0:0:29:0%:55:1E0:39:29:22:7:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:17:5:22 0/0:0:0:0:0:14:0%:25:1E0:45:14:10:4:14 0/0:0:0:0:0:26:0%:47:1E0:39:26:19:7:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:46:0%:85:1E0:39:46:29:17:47 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:35 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:19 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:21 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 0/0:0:0:0:0:24:0%:44:1E0:44:24:18:6:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:19:7:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:30 0/0:38:1:1:0:25:4%:38:5E-1:40:24:12:12:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:57:0%:99:1E0:44:57:43:14:57 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:25 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:25 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:40 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:21 0/0:0:0:0:0:40:0%:74:1E0:41:40:28:12:40 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:26 0/0:0:0:0:0:39:0%:74:1E0:43:39:26:13:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:33 0/0:0:0:0:0:44:0%:81:1E0:43:44:30:14:44 0/0:0:0:0:0:34:0%:62:1E0:44:34:23:11:36 0/0:46:1:0:1:33:3.03%:52:5E-1:40:32:19:13:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:43 0/0:0:0:0:0:50:0%:92:1E0:42:50:31:19:52 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:15:0%:29:1E0:42:15:5:10:16 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:35 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:39 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:25:13:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:35 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:36 0/0:0:0:0:0:33:0%:63:1E0:38:33:24:9:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:30 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:19 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:39:0%:74:1E0:40:39:25:14:42 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:45 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:26 0/0:0:0:0:0:33:0%:63:1E0:38:33:20:13:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:16:7:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:35 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:20:9:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:21:9:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:39 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:20 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:18 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:38 0/0:0:0:0:0:28:0%:51:1E0:37:28:19:9:30 0/0:0:0:0:0:36:0%:66:1E0:39:36:24:12:36 0/0:0:0:0:0:25:0%:48:1E0:36:25:18:7:27 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:52:0%:96:1E0:39:52:35:17:52 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:39 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:23 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:38:38:22:16:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:46 0/0:0:0:0:0:24:0%:44:1E0:36:24:16:8:27 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:42 0/0:0:0:0:0:33:0%:63:1E0:38:33:24:9:34 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:39 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:27 0/0:0:0:0:0:31:0%:59:1E0:37:31:21:10:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:39 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:42 0/0:0:0:0:0:34:0%:62:1E0:39:34:27:7:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:43 0/0:0:0:0:0:38:0%:70:1E0:40:38:26:12:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:41 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:23:10:34 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:45 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:39 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:26 MTB_anc 2416013 . T A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|murD_Rv2155c|gene2196|transcript|Transcript_gene2196|Coding|1/1|c.382A>T|p.Thr128Ser|382/1461|382/1461|128/486||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2416013T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2416013T>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:54 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:46 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:33 0/0:0:0:0:0:35:0%:67:1E0:48:35:14:21:35 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:15 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:24 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:30 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:39 0/0:0:0:0:0:12:0%:21:1E0:45:12:9:3:12 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:42 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:19 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:18 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:32 0/0:0:0:0:0:42:0%:77:1E0:39:42:26:16:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:43 0/0:0:0:0:0:25:0%:48:1E0:40:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:29 0/0:0:0:0:0:11:0%:22:1E0:42:11:5:6:11 0/0:0:0:0:0:30:0%:55:1E0:40:30:7:23:31 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:38 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:49 0/0:0:0:0:0:50:0%:92:1E0:41:50:31:19:50 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:36:0%:66:1E0:38:36:19:17:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:25 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:43 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:28 0/0:0:0:0:0:52:0%:96:1E0:41:52:28:24:54 0/0:0:0:0:0:46:0%:85:1E0:39:46:19:27:47 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:19:0%:37:1E0:44:19:14:5:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:36 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:52:0%:96:1E0:37:52:31:21:52 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:38 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:6:17:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:53:0%:99:1E0:44:53:24:29:54 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:44 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:17:0%:33:1E0:43:17:4:13:17 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:11:0%:22:1E0:49:11:5:6:11 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:43:0%:82:1E0:38:43:25:18:43 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 0/0:0:0:0:0:38:0%:70:1E0:39:38:25:13:38 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:36 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:33 0/0:0:0:0:0:52:0%:96:1E0:39:52:30:22:52 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:19 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:8:22:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:27 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:35 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:24 0/0:0:0:0:0:40:0%:74:1E0:44:40:26:14:40 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:31 0/0:0:0:0:0:18:0%:32:1E0:40:18:12:6:18 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:33 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:26 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:18 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:19 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:14:0%:25:1E0:34:14:10:4:14 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:32 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:22 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:32 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:23 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:24 0/0:0:0:0:0:11:0%:22:1E0:38:11:7:4:12 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:21 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:28 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:40 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:26 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:22 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:51 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:23 0/0:0:0:0:0:24:0%:44:1E0:35:24:10:14:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:32 0/0:0:0:0:0:31:0%:59:1E0:37:31:13:18:34 0/0:0:0:0:0:37:0%:70:1E0:36:37:20:17:39 0/0:0:0:0:0:38:0%:70:1E0:36:38:13:25:40 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:27 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:34:0%:62:1E0:36:34:20:14:35 0/0:0:0:0:0:35:0%:67:1E0:34:35:15:20:37 0/0:0:0:0:0:17:0%:33:1E0:35:17:10:7:20 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:34 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:38:38:12:26:42 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:30 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:14:23:37 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:23 0/0:0:0:0:0:24:0%:44:1E0:39:24:5:19:24 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:19 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:30 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:25 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:48 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:45 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 MTB_anc 2416156 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|murD_Rv2155c|gene2196|transcript|Transcript_gene2196|Coding|1/1|c.239C>T|p.Thr80Ile|239/1461|239/1461|80/486||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2416156G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2416156G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:51:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:37:19:18:38:97.37%:99:5.6582E-21:36:1:0:1:38 1/1:43:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:49:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:67 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:45:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:33:14:19:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:42:47:17:30:48:100%:99:6.1512E-28:0:0:0:0:51 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:27:15:12:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:37:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:37:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 MTB_anc 2418147 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|murF_Rv2157c|gene2198|transcript|Transcript_gene2198|Coding|1/1|c.858C>T|p.Ala286Ala|858/1533|858/1533|286/510||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2418147G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2418147G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:50 0/0:0:0:0:0:10:0%:17:1E0:50:10:7:3:10 0/0:0:0:0:0:53:0%:99:1E0:47:53:25:28:53 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:32:0%:59:1E0:51:32:9:23:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:27 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:38 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:18 0/0:0:0:0:0:34:0%:62:1E0:45:34:9:25:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:13:0%:25:1E0:51:13:8:5:13 0/0:0:0:0:0:20:0%:36:1E0:40:20:14:6:20 0/0:0:0:0:0:19:0%:37:1E0:44:19:4:15:19 0/0:0:0:0:0:22:0%:40:1E0:45:22:7:15:22 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:48:0%:89:1E0:41:48:16:32:48 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:18 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:11:0%:22:1E0:45:11:6:5:11 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:9:21:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:56:0%:99:1E0:41:56:31:25:57 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:9:25:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:6:27:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:8:23:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:39:0%:74:1E0:46:39:13:26:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:39 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:41:0%:78:1E0:43:41:13:28:41 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:17 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:43 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:46 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:36 0/0:0:0:0:0:13:0%:25:1E0:39:13:2:11:13 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:9:21:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:48:28:8:20:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:47 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:51:31:14:17:31 0/0:0:0:0:0:21:0%:40:1E0:49:21:15:6:21 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:0:0:0:0:24:0%:44:1E0:47:24:7:17:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:50:0%:92:1E0:44:50:14:36:50 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:40 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:16 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:20:0%:36:1E0:50:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:24:0%:44:1E0:51:24:12:12:26 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:21 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:22 0/0:0:0:0:0:31:0%:59:1E0:39:31:10:21:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:43 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:9:25:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:10:21:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:31 0/0:0:0:0:0:19:0%:37:1E0:44:19:5:14:21 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:7:22:29 0/0:0:0:0:0:50:0%:92:1E0:44:50:29:21:52 0/0:0:0:0:0:59:0%:99:1E0:41:59:29:30:60 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:43 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:38 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:33 0/0:0:0:0:0:39:0%:74:1E0:39:39:8:31:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:15:9:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:38 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:24 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:5:18:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:11:27:38 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:19 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:33:0%:63:1E0:39:33:9:24:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:33 MTB_anc 2419142 . G A . PASS AC=296;AF=1.00;AN=296;ANN=A|synonymous_variant|LOW|murE_Rv2158c|gene2199|transcript|Transcript_gene2199|Coding|1/1|c.1467C>T|p.Val489Val|1467/1608|1467/1608|489/535||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2419142G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2419142G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 MTB_anc 2420876 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv2159c_Rv2159c|gene2200|transcript|Transcript_gene2200|Coding|1/1|c.790A>C|p.Thr264Pro|790/1035|790/1035|264/344||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2420876T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2420876T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:42 0/0:0:0:0:0:8:0%:14:1E0:46:8:3:5:8 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:24 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:26 0/0:0:0:0:0:12:0%:21:1E0:40:12:6:6:13 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:28 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:26 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:20 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:20 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:26:14:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:8:23:31 0/0:0:0:0:0:53:0%:99:1E0:42:53:28:25:55 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:35 0/0:0:0:0:0:19:0%:37:1E0:46:19:15:4:19 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:40 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:39 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:33 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:36 0/0:0:0:0:0:48:0%:89:1E0:41:48:20:28:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:23 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:41 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:35 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:49 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:42 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:49 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:15 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:36 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:19:0%:37:1E0:46:19:13:6:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:18:6:24 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:23 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:22 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:52 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:8:17:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:24 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:33 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:35 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:17:0%:33:1E0:40:17:5:12:17 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:52:0%:96:1E0:42:52:29:23:53 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:23 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:31 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:20 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:32:0%:59:1E0:37:32:19:13:34 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:22 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:13 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:40 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:16:0%:29:1E0:34:16:3:13:18 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:33 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:26 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:31 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:32 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:24 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:44 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:24 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:35 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:26 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:35 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:24 0/0:0:0:0:0:29:0%:55:1E0:36:29:9:20:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:26 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:31 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:18 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:28 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:49 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:26 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:35 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:38 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:37 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:36 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:30 MTB_anc 2420877 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv2159c_Rv2159c|gene2200|transcript|Transcript_gene2200|Coding|1/1|c.789G>C|p.Trp263Cys|789/1035|789/1035|263/344||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2420877C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2420877C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:41 0/0:0:0:0:0:7:0%:14:1E0:45:7:3:4:8 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:13 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:25 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:40 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:15 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:20 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:21 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:44:38:25:13:39 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:8:22:30 0/0:0:0:0:0:54:0%:99:1E0:41:54:28:26:55 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:35 0/0:0:0:0:0:19:0%:37:1E0:47:19:15:4:19 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:39 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:33 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:40 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 0/0:0:0:0:0:47:0%:89:1E0:40:47:19:28:48 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:23 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:41 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:20 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:35 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:49 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:49 0/0:0:0:0:0:15:0%:29:1E0:49:15:7:8:15 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:36 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:19:0%:37:1E0:46:19:13:6:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:18:6:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:34 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:24 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:29 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 0/0:0:0:0:0:51:0%:97:1E0:40:51:26:25:52 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:8:18:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:33 0/0:0:0:0:0:35:0%:67:1E0:37:35:17:18:35 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:15:0%:29:1E0:41:15:5:10:17 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:52:0%:96:1E0:42:52:29:23:53 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:23 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:32 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:38:31:20:11:33 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:22 0/0:0:0:0:0:11:0%:22:1E0:39:11:5:6:13 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:33:0%:63:1E0:39:33:12:21:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:18:0%:32:1E0:35:18:3:15:18 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:33 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:26 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:9:14:24 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:45 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:24 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:35 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:35 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:23 0/0:0:0:0:0:30:0%:55:1E0:36:30:12:18:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:26 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:29 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:18 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:23 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:45:0%:85:1E0:37:45:22:23:48 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:26 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:34 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:34 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:38 0/0:0:0:0:0:36:0%:66:1E0:37:36:22:14:37 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:29 MTB_anc 2421252 . C T . PASS AC=298;AF=1.00;AN=298;ANN=T|synonymous_variant|LOW|Rv2159c_Rv2159c|gene2200|transcript|Transcript_gene2200|Coding|1/1|c.414G>A|p.Pro138Pro|414/1035|414/1035|138/344||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2421252C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2421252C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:21 1/1:46:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:39 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:40:23:9:14:24:95.83%:99:1.2146E-13:0:0:0:0:26 1/1:43:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:22 1/1:41:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:37:20:13:7:21:95.24%:99:4.0873E-11:38:1:1:0:23 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:38 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:37:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:44 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:29 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:33:16:17:34:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:49 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:28 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:29 1/1:38:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:39:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:39:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:29 1/1:38:26:14:12:27:96.3%:99:1.4382E-14:39:1:1:0:28 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:33:26:7:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:37:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:35:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:37:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:27 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 MTB_anc 2421816 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2421816G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.2421816G>A||||||,A|intragenic_variant|MODIFIER|Rv2160c_Rv2160c|gene2201|gene_variant|gene2201|||n.2421816G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:38:6:32:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:49:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:54:17:37:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:55:18:37:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:37:7:30:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:49:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:35:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:36:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 2423819 . G C . PASS AC=283;AF=0.996;AN=284;ANN=C|synonymous_variant|LOW|PE_PGRS38_Rv2162c|gene2203|transcript|Transcript_gene2203|Coding|1/1|c.1020C>G|p.Gly340Gly|1020/1599|1020/1599|340/532||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2423819G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2423819G>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:9:3:6:10:90%:42:5.9538E-5:38:1:0:1:10 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:19:12:7:20:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:30:20:10:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:11 1/1:35:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:45:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:42:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 0/1:36:8:5:3:9:88.89%:36:2.0568E-4:34:1:1:0:9 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 2424008 . G T . PASS AC=264;AF=1.00;AN=264;ANN=T|synonymous_variant|LOW|PE_PGRS38_Rv2162c|gene2203|transcript|Transcript_gene2203|Coding|1/1|c.831C>A|p.Ala277Ala|831/1599|831/1599|277/532||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2424008G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2424008G>T||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:11 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:27 1/1:35:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:14 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:22 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:16:14:2:18:100%:87:1.6637E-9:0:0:0:0:20 1/1:40:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:20 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:42:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:35:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:27 1/1:34:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:36:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:36:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:39:30:9:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:35:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:16 1/1:38:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:34:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 MTB_anc 2424864 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|PE_PGRS38_Rv2162c-pbpB_Rv2163c|gene2203-gene2204|intergenic_region|gene2203-gene2204|||n.2424864G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:53:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:51:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:47:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:37:18:19:38:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:49:19:30:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:61:32:29:61:100%:99:2.609E-36:0:0:0:0:64 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 2425471 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|pbpB_Rv2163c|gene2204|transcript|Transcript_gene2204|Coding|1/1|c.1617G>A|p.Arg539Arg|1617/2040|1617/2040|539/679||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.2425471C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2425471C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:51:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:48:22:26:49:97.96%:99:1.9625E-27:60:1:0:1:49 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:24:13:11:25:96%:99:2.0568E-13:38:1:1:0:25 1/1:46:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:50:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:51:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:53:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:52:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:28:13:15:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:56 1/1:41:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:36:19:17:37:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:43:70:31:39:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:48:28:20:48:100%:99:1.554E-28:0:0:0:0:52 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:61:31:30:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:62:24:38:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 2429367 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2165c_Rv2165c|gene2206|transcript|Transcript_gene2206|Coding|1/1|c.59C>G|p.Ala20Gly|59/1191|59/1191|20/396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2429367G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2429367G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:54:30:24:55:98.18%:99:4.0229E-32:0:0:0:0:56 1/1:46:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:51:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:44:11:33:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:61 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:45:17:28:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:50:24:13:11:25:96%:99:3.101E-14:0:0:0:0:25 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:54:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:51:36:19:17:38:94.74%:99:2.2598E-21:0:0:0:0:38 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:22:14:8:23:95.65%:99:2.9149E-12:60:1:0:1:23 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:42:24:18:43:97.67%:99:6.6289E-24:38:1:1:0:44 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:47:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:62:22:40:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:41:68:34:34:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:68:32:36:69:98.55%:99:1.6809E-40:0:0:0:0:69 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 2431533 . T C . PASS AC=72;AF=0.240;AN=300;ANN=C|intergenic_region|MODIFIER|Rv2166c_Rv2166c-Rv2169c_Rv2169c|gene2207-gene2208|intergenic_region|gene2207-gene2208|||n.2431533T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:5:17:22 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:34 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:22:0%:40:1E0:42:22:2:20:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:10:0%:17:1E0:42:10:3:7:11 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:38 0/0:0:0:0:0:14:0%:25:1E0:44:14:5:9:14 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 1/1:49:12:4:8:13:92.31%:58:1.3461E-6:37:1:1:0:13 0/0:0:0:0:0:13:0%:25:1E0:44:13:6:7:15 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:27 0/0:0:0:0:0:43:0%:82:1E0:40:43:18:25:44 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:13:26:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:8:17:25 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:22 1/1:49:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 1/1:44:17:5:12:18:94.44%:86:2.0936E-9:31:1:0:1:18 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:22 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:48 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:39 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:42 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:17:0%:33:1E0:42:17:10:7:17 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:21 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:12:26:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:18 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:15:0%:29:1E0:39:15:6:9:15 0/0:0:0:0:0:32:0%:59:1E0:42:32:8:24:32 0/0:0:0:0:0:19:0%:37:1E0:40:19:4:15:19 0/0:0:0:0:0:20:0%:36:1E0:41:20:5:15:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:33:0%:63:1E0:39:33:11:22:33 1/1:49:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:15:5:10:16:93.75%:75:2.8282E-8:36:1:1:0:16 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:9 0/0:0:0:0:0:12:0%:21:1E0:46:12:5:7:13 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:19:0%:37:1E0:50:19:8:11:20 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:17:0%:33:1E0:40:17:6:11:17 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 0/0:0:0:0:0:14:0%:25:1E0:42:14:3:11:14 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:7:22:29 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:42:0%:77:1E0:45:42:13:29:44 0/0:0:0:0:0:20:0%:36:1E0:43:20:6:14:20 1/1:49:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:15:0%:29:1E0:46:15:3:12:16 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:35 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:25 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:27 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:15:0%:29:1E0:40:15:5:10:15 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:17 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:13:0%:25:1E0:40:13:2:11:13 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:28 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:56:0%:99:1E0:43:56:27:29:57 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:18 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:26 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:32 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:25:0%:48:1E0:39:25:7:18:26 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:27 1/1:37:24:14:10:25:96%:99:2.0568E-13:38:1:0:1:26 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 0/0:0:0:0:0:46:0%:85:1E0:37:46:21:25:48 0/0:0:0:0:0:23:0%:44:1E0:40:23:7:16:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:29 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:27:0%:52:1E0:39:27:7:20:27 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:17 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:43 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 MTB_anc 2434475 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv2172c_Rv2172c|gene2211|transcript|Transcript_gene2211|Coding|1/1|c.62G>C|p.Arg21Pro|62/906|62/906|21/301||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2434475C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2434475C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:47 0/0:0:0:0:0:19:0%:37:1E0:47:19:13:6:19 0/0:39:1:0:1:54:1.85%:87:5E-1:47:53:30:23:55 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:32:0%:59:1E0:52:32:16:16:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:60:1:0:1:32:3.12%:48:5E-1:49:31:16:15:33 0/0:0:0:0:0:34:0%:62:1E0:48:34:21:13:34 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:39 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:51 0/0:0:0:0:0:21:0%:40:1E0:49:21:15:6:21 0/0:0:0:0:0:50:0%:92:1E0:43:50:30:20:51 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:34 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:18 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:46:0%:85:1E0:46:46:29:17:46 0/0:0:0:0:0:42:0%:77:1E0:48:42:20:22:43 0/0:0:0:0:0:39:0%:74:1E0:48:39:24:15:39 0/0:0:0:0:0:45:0%:85:1E0:42:45:28:17:46 0/0:0:0:0:0:23:0%:44:1E0:47:23:7:16:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:37:1:1:0:34:2.94%:51:5E-1:45:33:20:13:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:43:0%:82:1E0:49:43:26:17:43 0/0:0:0:0:0:32:0%:59:1E0:50:32:18:14:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:25:14:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:66:0%:99:1E0:49:66:34:32:68 0/0:0:0:0:0:48:0%:89:1E0:46:48:25:23:48 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:34:0%:62:1E0:50:34:18:16:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:19:7:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:27:17:44 0/0:0:0:0:0:28:0%:51:1E0:44:28:21:7:28 0/0:0:0:0:0:24:0%:44:1E0:46:24:16:8:24 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:47:0%:89:1E0:42:47:34:13:49 0/0:0:0:0:0:45:0%:85:1E0:48:45:30:15:46 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:49:0%:93:1E0:46:49:30:19:50 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:46 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:51:0%:97:1E0:43:51:37:14:51 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:38 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:49:0%:93:1E0:43:49:32:17:49 0/0:0:0:0:0:43:0%:82:1E0:46:43:24:19:44 0/0:0:0:0:0:43:0%:82:1E0:46:43:26:17:43 0/0:60:1:0:1:57:1.75%:95:5E-1:48:56:28:28:58 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:29 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:39:1:0:1:24:4.17%:34:5E-1:46:23:14:9:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:41:0%:78:1E0:47:41:23:18:41 0/0:0:0:0:0:36:0%:66:1E0:51:36:25:11:37 0/0:0:0:0:0:13:0%:25:1E0:49:13:7:6:13 0/0:0:0:0:0:38:0%:70:1E0:50:38:22:16:38 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:44 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:35 0/0:0:0:0:0:37:0%:70:1E0:51:37:23:14:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:26:14:40 0/0:0:0:0:0:49:0%:93:1E0:46:49:22:27:50 0/0:0:0:0:0:52:0%:96:1E0:46:52:31:21:52 0/0:0:0:0:0:33:0%:63:1E0:50:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:16 0/0:0:0:0:0:43:0%:82:1E0:51:43:21:22:43 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:36:0%:66:1E0:46:36:24:12:37 0/0:0:0:0:0:31:0%:59:1E0:50:31:21:10:31 0/0:0:0:0:0:50:0%:92:1E0:41:50:24:26:50 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:55:0%:99:1E0:43:55:31:24:55 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:29 0/0:0:0:0:0:43:0%:82:1E0:45:43:27:16:44 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:23 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:43 0/0:39:1:0:1:32:3.12%:48:5E-1:42:31:19:12:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:39:1:0:1:39:2.56%:62:5E-1:47:38:17:21:39 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:37 0/0:0:0:0:0:48:0%:89:1E0:45:48:25:23:51 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:32 0/0:0:0:0:0:48:0%:89:1E0:47:48:28:20:48 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:61:0%:99:1E0:42:61:36:25:61 0/0:0:0:0:0:50:0%:92:1E0:42:50:32:18:50 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:31 0/0:0:0:0:0:49:0%:93:1E0:40:49:24:25:49 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:27:17:45 0/0:0:0:0:0:42:0%:77:1E0:38:42:17:25:45 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:43 0/0:0:0:0:0:36:0%:66:1E0:40:36:23:13:37 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:41 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:48 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:24:11:37 0/0:39:1:0:1:62:1.61%:99:5E-1:41:61:34:27:62 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:28 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:44:0%:81:1E0:42:44:28:16:44 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:49:0%:93:1E0:45:49:33:16:49 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:37 0/0:37:1:0:1:56:1.79%:91:5E-1:41:55:35:20:57 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:36 MTB_anc 2437259 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|mptA_Rv2174|gene2213|transcript|Transcript_gene2213|Coding|1/1|c.1351T>G|p.Ser451Ala|1351/1551|1351/1551|451/516||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2437259T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2437259T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:48:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:40:18:22:41:97.56%:99:9.8874E-23:33:1:1:0:41 1/1:38:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:60:31:29:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:37:17:20:38:97.37%:99:5.7269E-22:0:0:0:0:39 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:52 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 2439204 . A G . PASS AC=68;AF=0.227;AN=300;ANN=G|intergenic_region|MODIFIER|pknL_Rv2176-Rv2177c_Rv2177c|gene2215-gene2216|intergenic_region|gene2215-gene2216|||n.2439204A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:44 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:17 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:16:0%:29:1E0:49:16:11:5:17 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 1/1:52:22:14:8:23:95.65%:99:2.9149E-12:37:1:0:1:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:55:0%:99:1E0:43:55:22:33:56 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:19 0/0:60:1:1:0:35:2.86%:55:5E-1:46:34:14:20:37 0/0:60:2:1:1:16:12.5%:15:2.4194E-1:43:14:7:7:17 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:20 1/1:43:20:7:13:22:90.91%:98:1.3117E-10:38:2:1:1:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:13:0%:25:1E0:44:13:8:5:13 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:53 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:24 1/1:45:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:20 1/1:45:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:25:0%:48:1E0:40:25:6:19:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:4:17:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:35 0/0:39:1:0:1:35:2.86%:55:5E-1:41:34:18:16:37 0/0:0:0:0:0:68:0%:99:1E0:45:68:28:40:69 0/0:0:0:0:0:41:0%:78:1E0:46:41:25:16:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:25 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:41 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:16 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:27 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:39 0/0:0:0:0:0:10:0%:17:1E0:49:10:6:4:10 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:34 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:36 0/0:52:3:0:3:31:9.68%:34:1.1885E-1:40:28:13:15:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:39 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:17:9:8:18:94.44%:93:4.2852E-10:0:0:0:0:19 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:13:0%:25:1E0:53:13:7:6:13 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:14:0%:25:1E0:46:14:8:6:14 1/1:50:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:34 0/0:38:2:0:2:20:10%:21:2.4359E-1:46:18:7:11:20 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:20 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:25 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:24 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:37:1:0:1:15:6.67%:21:5E-1:43:14:9:5:15 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:24 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:29 1/1:43:44:25:19:45:100%:99:3.8097E-26:0:0:0:0:46 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:16 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:42 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:32 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:47 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:17 0/0:0:0:0:0:26:0%:47:1E0:39:26:18:8:28 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:22 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:34 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:6:26:32 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:28:0%:51:1E0:37:28:21:7:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:22 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:33 0/0:0:0:0:0:19:0%:37:1E0:44:19:16:3:19 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:21 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:39 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:47 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:31 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:19 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:49 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:15 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:21 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:36 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:53 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:37:0%:70:1E0:39:37:24:13:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:39 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:31 0/0:0:0:0:0:33:0%:63:1E0:37:33:18:15:35 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:26 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:19:5:14:20:95%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:45:0%:85:1E0:37:45:28:17:49 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:22:0%:40:1E0:40:22:7:15:23 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:35:0%:67:1E0:42:35:24:11:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:39:1:0:1:17:5.88%:24:5E-1:43:16:8:8:18 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:45 0/0:0:0:0:0:28:0%:51:1E0:37:28:18:10:31 MTB_anc 2439401 . A G . PASS AC=48;AF=0.171;AN=280;ANN=G|missense_variant|MODERATE|Rv2177c_Rv2177c|gene2216|transcript|Transcript_gene2216|Coding|1/1|c.547T>C|p.Tyr183His|547/666|547/666|183/221||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2439401A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2439401A>G||||||;HET=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:21 0/0:0:0:0:0:51:0%:97:1E0:48:51:25:26:51 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:26:0%:47:1E0:49:26:18:8:26 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:38 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:18 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:50 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:0:0:0:0:33:0%:63:1E0:47:33:12:21:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:49:0%:93:1E0:42:49:19:30:50 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:36 ./. 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:34 0/0:0:0:0:0:33:0%:63:1E0:48:33:12:21:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:60:1:1:0:23:4.35%:34:5E-1:46:22:13:9:23 0/0:39:2:1:1:29:6.9%:37:2.4561E-1:45:27:15:12:29 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:64:0%:99:1E0:49:64:26:38:64 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:38:0%:70:1E0:45:38:24:14:39 0/0:0:0:0:0:21:0%:40:1E0:48:21:5:16:21 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:37:1:0:1:39:2.56%:62:5E-1:45:38:20:18:39 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:40 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:44 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:14:0%:25:1E0:53:14:7:7:14 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:22 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:48 0/0:39:1:0:1:37:2.7%:59:5E-1:44:36:14:22:38 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:39:0%:74:1E0:49:39:22:17:40 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:48:0%:89:1E0:47:48:25:23:49 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:15:0%:29:1E0:47:15:9:6:15 0/0:0:0:0:0:17:0%:33:1E0:48:17:10:7:17 0/0:39:1:1:0:46:2.17%:73:5E-1:43:45:26:19:46 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:20:0%:36:1E0:49:20:6:14:21 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 0/0:0:0:0:0:39:0%:74:1E0:49:39:18:21:39 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:39:1:0:1:34:2.94%:51:5E-1:47:33:18:15:35 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:27:0%:52:1E0:44:27:20:7:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:14:0%:25:1E0:47:14:8:6:14 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:29 0/0:0:0:0:0:29:0%:55:1E0:49:29:19:10:29 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:17:0%:33:1E0:47:17:11:6:17 0/0:0:0:0:0:47:0%:89:1E0:42:47:16:31:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:56:0%:99:1E0:44:56:33:23:57 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:35 0/0:0:0:0:0:34:0%:62:1E0:47:34:23:11:34 0/0:33:1:1:0:30:3.33%:44:5E-1:44:29:16:13:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:39:1:1:0:34:2.94%:51:5E-1:44:33:18:15:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:20:0%:36:1E0:51:20:16:4:20 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:54:0%:99:1E0:43:54:26:28:54 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:37 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:58:0%:99:1E0:44:58:33:25:58 1/1:37:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:47:0%:89:1E0:40:47:26:21:48 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:26:10:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:35 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:52:0%:96:1E0:39:52:26:26:53 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:50 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:37 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:0:0:0:0:14:0%:25:1E0:44:14:9:5:14 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 MTB_anc 2439458 . C T . PASS AC=20;AF=0.079;AN=252;ANN=T|missense_variant|MODERATE|Rv2177c_Rv2177c|gene2216|transcript|Transcript_gene2216|Coding|1/1|c.490G>A|p.Ala164Thr|490/666|490/666|164/221||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2439458C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2439458C>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:26:0%:47:1E0:51:26:12:14:26 0/0:60:1:0:1:57:1.75%:95:5E-1:47:56:31:25:57 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:35 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:21 0/0:0:0:0:0:53:0%:99:1E0:44:53:30:23:54 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:36 0/0:0:0:0:0:39:0%:74:1E0:47:39:19:20:39 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:35:0%:67:1E0:47:35:22:13:36 0/0:0:0:0:0:49:0%:93:1E0:47:49:27:22:49 0/0:0:0:0:0:42:0%:77:1E0:41:42:26:16:42 ./. 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:10:19:29 0/0:0:0:0:0:33:0%:63:1E0:51:33:13:20:34 0/0:38:1:1:0:30:3.33%:44:5E-1:47:29:14:15:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:38:2:1:1:30:6.67%:37:2.4576E-1:43:28:16:12:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:64:0%:99:1E0:47:64:29:35:64 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:45:0%:85:1E0:46:45:29:16:46 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:46:0%:85:1E0:44:46:28:18:46 0/0:0:0:0:0:24:0%:44:1E0:45:24:7:17:24 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:39:1:0:1:42:2.38%:66:5E-1:45:41:24:17:44 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:39 0/0:0:0:0:0:46:0%:85:1E0:41:46:28:18:46 0/0:0:0:0:0:32:0%:59:1E0:52:32:17:15:33 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:19 0/0:39:1:1:0:42:2.38%:66:5E-1:42:41:25:16:44 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:31:0%:59:1E0:39:31:20:11:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:57 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:42 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:48:0%:89:1E0:47:48:26:22:48 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:19 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:46:0%:85:1E0:48:46:31:15:46 ./. 0/0:0:0:0:0:24:0%:44:1E0:51:24:10:14:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:43:0%:82:1E0:49:43:21:22:43 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:32:0%:59:1E0:43:32:24:8:32 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:13:0%:25:1E0:45:13:7:6:13 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:21:9:30 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:53:0%:99:1E0:41:53:24:29:53 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:32 0/0:0:0:0:0:52:0%:96:1E0:44:52:30:22:52 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:26 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:24:12:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:39:1:1:0:34:2.94%:51:5E-1:44:33:18:15:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:22:6:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:43 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:46 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:40 0/0:0:0:0:0:57:0%:99:1E0:44:57:32:25:58 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:45 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:45 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:30 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:27:0%:52:1E0:41:27:20:7:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:52:0%:96:1E0:38:52:21:31:52 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:47 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:20 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:54:0%:99:1E0:41:54:30:24:54 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 MTB_anc 2439460 . A G . PASS AC=20;AF=0.079;AN=252;ANN=G|missense_variant|MODERATE|Rv2177c_Rv2177c|gene2216|transcript|Transcript_gene2216|Coding|1/1|c.488T>C|p.Ile163Thr|488/666|488/666|163/221||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2439460A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2439460A>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:48 0/0:0:0:0:0:26:0%:47:1E0:51:26:12:14:26 0/0:0:0:0:0:57:0%:99:1E0:47:57:31:26:57 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:35 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:20:0%:36:1E0:49:20:12:8:21 0/0:0:0:0:0:51:0%:97:1E0:44:51:28:23:54 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:19 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:36 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:39 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:48 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:36 0/0:0:0:0:0:49:0%:93:1E0:46:49:27:22:49 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:42 ./. 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:29 0/0:0:0:0:0:33:0%:63:1E0:51:33:14:19:33 0/0:37:1:1:0:31:3.23%:48:5E-1:47:30:14:16:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:44:26:14:12:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:64:0%:99:1E0:46:64:29:35:64 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:45:0%:85:1E0:45:45:28:17:46 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:41 0/0:0:0:0:0:46:0%:85:1E0:45:46:28:18:46 0/0:0:0:0:0:24:0%:44:1E0:46:24:7:17:24 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:39:1:0:1:42:2.38%:66:5E-1:44:41:23:18:44 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:43:0%:82:1E0:42:43:27:16:45 0/0:0:0:0:0:33:0%:63:1E0:51:33:18:15:33 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:39:1:1:0:42:2.38%:66:5E-1:42:41:24:17:44 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:31 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:56 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:43 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:42 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:48:0%:89:1E0:47:48:26:22:48 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:19 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:27 0/0:0:0:0:0:44:0%:81:1E0:49:44:30:14:45 ./. 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:41 0/0:0:0:0:0:41:0%:78:1E0:50:41:19:22:43 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:29:0%:55:1E0:43:29:21:8:32 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:13:0%:25:1E0:45:13:7:6:13 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:21:9:30 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:51:0%:97:1E0:41:51:22:29:53 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:52:0%:96:1E0:44:52:30:22:52 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:41 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:39:1:1:0:34:2.94%:51:5E-1:44:33:17:16:34 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:22:6:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:42 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:46 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:40 0/0:0:0:0:0:58:0%:99:1E0:44:58:32:26:58 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:35 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:45 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:44 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:30 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:50:0%:92:1E0:38:50:19:31:52 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:47 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:26 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:52:0%:96:1E0:42:52:30:22:52 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:45 MTB_anc 2444575 . C T . PASS AC=12;AF=0.040;AN=300;ANN=T|missense_variant|MODERATE|Rv2181_Rv2181|gene2220|transcript|Transcript_gene2220|Coding|1/1|c.1274C>T|p.Thr425Met|1274/1284|1274/1284|425/427||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2444575C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2444575C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:43 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:16:0%:29:1E0:51:16:6:10:17 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:33 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:21 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:11:24:35 0/0:0:0:0:0:60:0%:99:1E0:43:60:35:25:61 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:13:0%:25:1E0:44:13:6:7:13 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:25 0/0:0:0:0:0:17:0%:33:1E0:46:17:6:11:17 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:22 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:25 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:62:0%:99:1E0:45:62:34:28:62 0/0:0:0:0:0:51:0%:97:1E0:43:51:26:25:51 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:36 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:51 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:47 0/0:0:0:0:0:37:0%:70:1E0:48:37:15:22:37 0/0:0:0:0:0:12:0%:21:1E0:46:12:2:10:12 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:11:23:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:43 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:49 0/0:0:0:0:0:16:0%:29:1E0:42:16:13:3:16 0/0:0:0:0:0:43:0%:82:1E0:43:43:14:29:43 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:8:29:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:47:0%:89:1E0:41:47:17:30:47 0/0:0:0:0:0:51:0%:97:1E0:43:51:21:30:51 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:48:39:15:24:39 0/0:0:0:0:0:13:0%:25:1E0:47:13:8:5:13 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:18:0%:32:1E0:52:18:10:8:18 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:43 1/1:40:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:25:11:36 0/0:0:0:0:0:32:0%:59:1E0:50:32:19:13:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 1/1:45:38:15:23:39:97.44%:99:1.4697E-21:38:1:1:0:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:45 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:9:21:30 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:23:0%:44:1E0:48:23:14:9:23 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:34:0%:62:1E0:38:34:10:24:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:36 0/0:0:0:0:0:14:0%:25:1E0:41:14:8:6:14 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:23 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:25 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:17 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:30 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:43 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 0/0:0:0:0:0:40:0%:74:1E0:38:40:16:24:43 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:24 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:26 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:55 0/0:0:0:0:0:43:0%:82:1E0:44:43:17:26:44 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:19 1/1:37:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:46 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:37 0/0:0:0:0:0:42:0%:77:1E0:38:42:15:27:44 0/0:0:0:0:0:45:0%:85:1E0:39:45:25:20:46 0/0:0:0:0:0:45:0%:85:1E0:40:45:13:32:45 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:34 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:25 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:49:0%:93:1E0:38:49:27:22:50 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:56:0%:99:1E0:43:56:32:24:56 0/0:0:0:0:0:31:0%:59:1E0:42:31:8:23:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:57:0%:99:1E0:43:57:30:27:57 0/0:0:0:0:0:49:0%:93:1E0:42:49:24:25:49 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:32 MTB_anc 2445484 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|synonymous_variant|LOW|Rv2183c_Rv2183c|gene2222|transcript|Transcript_gene2222|Coding|1/1|c.327C>T|p.Gly109Gly|327/396|327/396|109/131||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2445484G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2445484G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 1/1:47:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:49:34:20:14:34 0/0:0:0:0:0:47:0%:89:1E0:44:47:30:17:49 0/0:0:0:0:0:29:0%:55:1E0:50:29:17:12:30 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:47 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:25 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:38 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:50 0/0:0:0:0:0:31:0%:59:1E0:50:31:19:12:32 0/0:37:1:0:1:41:2.44%:66:5E-1:41:40:13:27:41 0/0:0:0:0:0:36:0%:67:1E0:47:35:19:16:36 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:50:1:1:0:28:3.57%:41:5E-1:41:27:16:11:28 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:31 0/0:0:0:0:0:43:0%:82:1E0:45:43:25:18:43 0/0:0:0:0:0:55:0%:99:1E0:49:55:32:23:56 0/0:0:0:0:0:36:0%:66:1E0:47:36:23:13:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:43 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:7:23:31 0/0:0:0:0:0:35:0%:67:1E0:49:35:12:23:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:34:0%:62:1E0:48:34:15:19:37 0/0:0:0:0:0:19:0%:37:1E0:49:19:12:7:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:61:0%:99:1E0:43:61:34:27:62 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:41 0/0:0:0:0:0:35:0%:67:1E0:50:35:16:19:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:65:0%:99:1E0:44:65:41:24:66 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:40 0/0:39:1:1:0:18:5.56%:24:5E-1:47:17:12:5:19 0/0:0:0:0:0:27:0%:52:1E0:50:27:15:12:28 0/0:0:0:0:0:45:0%:85:1E0:48:45:29:16:46 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:40:0%:74:1E0:50:40:15:25:40 0/0:0:0:0:0:51:0%:97:1E0:43:51:29:22:53 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:23 0/0:0:0:0:0:42:0%:77:1E0:49:42:20:22:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:49:32:20:12:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:44 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:35 0/0:32:1:1:0:29:3.45%:45:5E-1:43:28:16:12:29 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:45:0%:85:1E0:48:45:29:16:45 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:0:0:0:0:43:0%:82:1E0:49:43:25:18:43 0/0:0:0:0:0:29:0%:55:1E0:53:29:16:13:29 0/0:0:0:0:0:52:0%:96:1E0:42:52:30:22:52 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:47 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:14:0%:25:1E0:48:14:8:6:15 0/0:0:0:0:0:30:0%:55:1E0:50:30:19:11:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:27:17:44 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:43 0/0:0:0:0:0:50:0%:92:1E0:39:50:27:23:51 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:63:0%:99:1E0:41:63:30:33:63 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:25 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:49 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:50 0/0:0:0:0:0:54:0%:99:1E0:40:54:33:21:58 0/0:0:0:0:0:46:0%:85:1E0:38:46:18:28:47 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:45 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:37 0/0:0:0:0:0:52:0%:96:1E0:41:52:31:21:55 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:30 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:42 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:32 0/0:0:0:0:0:55:0%:99:1E0:38:55:28:27:57 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:47 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:42 0/0:60:1:1:0:46:2.17%:73:5E-1:43:45:30:15:46 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:25 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:50 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:47 0/0:0:0:0:0:25:0%:48:1E0:44:25:18:7:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:40 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:49 0/0:0:0:0:0:59:0%:99:1E0:43:59:34:25:60 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:36 MTB_anc 2447132 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|TB16.3_Rv2185c|gene2224|transcript|Transcript_gene2224|Coding|1/1|c.369G>C|p.Lys123Asn|369/435|369/435|123/144||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2447132C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2447132C>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:16:0%:29:1E0:54:16:12:4:17 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:43 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:25 0/0:0:0:0:0:32:0%:59:1E0:53:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:10:22:33 0/0:0:0:0:0:28:0%:51:1E0:53:28:15:13:29 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:38 0/0:0:0:0:0:41:0%:78:1E0:49:41:15:26:41 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:40 0/0:0:0:0:0:28:0%:51:1E0:51:28:13:15:28 0/0:0:0:0:0:49:0%:93:1E0:46:49:23:26:50 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:47:0%:89:1E0:47:47:25:22:47 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:18 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:50:26:16:10:26 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:19 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:37:0%:70:1E0:50:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:11:23:35 0/0:0:0:0:0:65:0%:99:1E0:47:65:38:27:66 0/0:0:0:0:0:60:0%:99:1E0:47:60:24:36:61 0/0:0:0:0:0:53:0%:99:1E0:47:53:26:27:53 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:52:34:12:22:35 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:39:1:0:1:31:3.23%:48:5E-1:44:30:16:14:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:38:1:0:1:48:2.08%:76:5E-1:43:47:21:26:49 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:44 0/0:60:1:1:0:42:2.38%:66:5E-1:45:41:28:13:42 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:19 0/0:0:0:0:0:43:0%:82:1E0:46:43:26:17:43 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:46 0/0:0:0:0:0:20:0%:36:1E0:45:20:4:16:21 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:42 0/0:0:0:0:0:45:0%:85:1E0:50:45:22:23:45 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:49:0%:93:1E0:46:49:26:23:51 0/0:60:1:1:0:35:2.86%:55:5E-1:45:34:16:18:35 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:57:0%:99:1E0:46:57:31:26:59 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:32 0/0:0:0:0:0:43:0%:82:1E0:48:43:23:20:43 0/0:0:0:0:0:16:0%:29:1E0:54:16:5:11:16 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:37 0/0:38:1:0:1:39:2.56%:62:5E-1:49:38:19:19:39 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:0:0:0:0:46:0%:85:1E0:48:46:24:22:46 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:36:0%:66:1E0:49:36:17:19:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:40:0%:74:1E0:50:40:18:22:40 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:46 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:40 0/0:0:0:0:0:34:0%:62:1E0:51:34:16:18:34 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:11:29:41 0/0:0:0:0:0:60:0%:99:1E0:45:60:27:33:60 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:27 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:21:0%:40:1E0:52:21:11:10:21 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:47:33:11:22:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:31 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:39 0/1:49:8:3:5:26:30.77%:26:2.076E-3:41:18:8:10:26 0/1:44:35:19:16:66:53.03%:99:5.6945E-14:44:31:18:13:66 0/0:0:0:0:0:55:0%:99:1E0:45:55:23:32:57 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:46 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:43 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:51 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:50 0/0:0:0:0:0:58:0%:99:1E0:41:58:25:33:59 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:40 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:48 0/0:0:0:0:0:47:0%:89:1E0:46:47:23:24:47 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:49 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:43 0/0:0:0:0:0:42:0%:77:1E0:43:42:15:27:44 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:37 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:66:0%:99:1E0:39:66:29:37:66 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:45:0%:85:1E0:45:45:29:16:45 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:52 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:51 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:43 0/0:0:0:0:0:41:0%:78:1E0:48:41:17:24:42 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:41 0/0:0:0:0:0:55:0%:99:1E0:45:55:29:26:56 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 MTB_anc 2447539 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|TB16.3_Rv2185c-Rv2186c_Rv2186c|gene2224-gene2225|intergenic_region|gene2224-gene2225|||n.2447539G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:52:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:53:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:51:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:48:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:63:28:35:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:51:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:58:26:32:59:100%:99:1.6283E-34:0:0:0:0:60 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:78:38:40:78:100%:99:1.7165E-46:0:0:0:0:79 1/1:43:60:32:28:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:43:57:38:19:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 2448458 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|fadD15_Rv2187|gene2226|transcript|Transcript_gene2226|Coding|1/1|c.299T>C|p.Ile100Thr|299/1803|299/1803|100/600||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2448458T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2448458T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:38:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:63:36:27:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:33:16:17:34:97.06%:99:1.2301E-18:37:1:0:1:35 1/1:44:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 2449295 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|fadD15_Rv2187|gene2226|transcript|Transcript_gene2226|Coding|1/1|c.1136A>G|p.Glu379Gly|1136/1803|1136/1803|379/600||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2449295A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2449295A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:59:37:22:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:54:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:54:25:29:55:98.18%:99:4.0229E-32:0:0:0:0:58 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:60:33:27:60:100%:99:1.035E-35:0:0:0:0:62 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:53:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:17:16:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:40:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:39:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:33:15:18:34:97.06%:99:1.3852E-19:0:0:0:0:36 1/1:38:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 2461325 . TAGCCCGGCGACGACCCGGGTCGGCACGACCCGGGAAGGAACCGGGCAAATCAAGCAC T . PASS AC=50;AF=0.167;AN=300;ANN=T|frameshift_variant&stop_lost&splice_region_variant|HIGH|qcrB_Rv2196|gene2235|transcript|Transcript_gene2235|Coding|1/1|c.1649_*55delAGCCCGGCGACGACCCGGGTCGGCACGACCCGGGAAGGAACCGGGCAAATCAAGCAC|p.Ter550fs|1649/1650|1649/1650|550/549||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2461326_2461382delAGCCCGGCGACGACCCGGGTCGGCACGACCCGGGAAGGAACCGGGCAAATCAAGCAC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2461326_2461382delAGCCCGGCGACGACCCGGGTCGGCACGACCCGGGAAGGAACCGGGCAAATCAAGCAC||||||,T|intergenic_region|MODIFIER|qcrB_Rv2196-Rv2197c_Rv2197c|gene2235-gene2236|intergenic_region|gene2235-gene2236|||n.2461326_2461382delAGCCCGGCGACGACCCGGGTCGGCACGACCCGGGAAGGAACCGGGCAAATCAAGCAC||||||;HOM=0;NC=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:47:11:8:3:31:35.48%:37:1.6659E-4:43:20:11:9:32 0/0:60:3:2:1:23:13.04%:22:1.1667E-1:44:20:13:7:24 0/1:53:10:4:6:34:29.41%:33:4.51E-4:47:24:10:14:34 0/0:45:3:1:2:22:13.64%:19:1.1628E-1:42:19:10:9:22 0/0:60:1:0:1:17:5.88%:24:5E-1:43:16:6:10:17 0/1:45:8:3:5:28:28.57%:26:2.188E-3:40:20:7:13:30 0/1:52:7:1:6:27:25.93%:22:5.0143E-3:46:20:11:9:28 0/0:42:4:3:1:22:18.18%:15:5.3885E-2:44:18:10:8:22 0/0:37:4:2:2:19:21.05%:13:5.251E-2:48:15:10:5:20 0/0:0:0:0:0:19:0%:37:1E0:53:19:11:8:19 0/0:51:5:4:1:26:19.23%:17:2.531E-2:46:21:11:10:26 0/1:43:7:0:7:42:16.28%:22:5.9972E-3:42:36:20:16:43 0/0:39:1:1:0:11:9.09%:14:5E-1:47:10:4:6:12 0/0:47:4:2:2:23:17.39%:18:5.4264E-2:41:19:8:11:23 0/0:45:3:2:1:24:12.5%:22:1.1702E-1:44:21:11:10:24 0/0:60:2:0:2:28:7.14%:34:2.4545E-1:47:26:15:11:28 0/0:49:4:3:1:21:19.05%:15:5.3471E-2:40:17:9:8:21 0/0:48:6:5:1:24:25%:11:1.0968E-2:45:18:8:10:25 0/0:48:4:2:2:19:21.05%:13:5.251E-2:45:15:9:6:20 0/0:50:5:4:1:22:22.73%:12:2.4248E-2:46:17:12:5:22 0/1:42:8:2:6:23:34.78%:27:1.8791E-3:41:15:8:7:25 0/1:54:11:3:8:49:22.45%:35:2.6004E-4:43:38:18:20:50 0/0:48:4:2:2:25:16%:21:5.4928E-2:46:21:11:10:25 0/0:55:5:3:2:24:20.83%:14:2.4823E-2:43:19:7:12:24 0/0:51:5:3:2:35:14.29%:30:2.6822E-2:41:30:16:14:35 0/0:49:2:2:0:20:10%:21:2.4359E-1:39:18:10:8:20 0/0:36:3:1:2:19:15.79%:17:1.1486E-1:50:16:10:6:20 0/1:52:7:0:7:23:30.43%:23:4.5803E-3:51:16:10:6:23 0/0:60:3:3:0:24:12.5%:22:1.1702E-1:43:21:8:13:25 0/0:43:4:1:3:25:16%:21:5.4928E-2:43:21:14:7:26 0/0:48:6:2:4:27:22.22%:16:1.1461E-2:40:21:9:12:27 0/1:45:8:5:3:29:27.59%:26:2.2392E-3:44:21:12:9:29 0/0:55:5:4:1:22:22.73%:12:2.4248E-2:44:17:9:8:22 0/0:50:6:4:2:25:24%:14:1.1145E-2:43:19:8:11:26 0/1:49:7:3:4:24:29.17%:23:4.7006E-3:44:17:7:10:24 0/1:44:9:5:4:36:25%:29:1.1061E-3:44:27:23:4:36 0/1:51:10:5:5:33:30.3%:33:4.3872E-4:43:23:12:11:34 0/1:54:9:3:6:49:18.37%:28:1.2935E-3:45:39:18:21:50 0/0:51:6:5:1:40:15%:30:1.2773E-2:42:34:16:18:40 0/1:44:11:6:5:39:27.5%:36:2.2064E-4:48:29:14:15:40 0/1:43:7:2:5:37:18.92%:22:5.721E-3:41:30:12:18:37 0/0:51:5:2:3:31:16.13%:24:2.6257E-2:40:26:17:9:31 0/0:49:4:3:1:28:14.29%:23:5.5494E-2:42:23:12:11:28 0/0:45:2:1:1:22:9.09%:24:2.4419E-1:40:20:12:8:23 0/0:49:4:3:1:27:14.81%:23:5.5494E-2:45:23:8:15:28 0/1:46:9:6:3:28:31.03%:30:9.4048E-4:46:20:7:13:30 0/0:42:3:1:2:19:15.79%:17:1.1486E-1:44:16:7:9:19 0/1:42:7:3:4:38:18.42%:22:5.7727E-3:43:31:18:13:38 0/0:44:6:2:4:37:15.79%:28:1.2628E-2:42:32:12:20:38 0/1:54:8:7:1:38:21.05%:25:2.5935E-3:47:30:16:14:38 0/0:40:5:3:2:23:21.74%:14:2.4548E-2:48:18:12:6:23 0/0:36:5:4:1:30:16.13%:24:2.6257E-2:43:26:16:10:32 0/1:51:6:2:4:18:33.33%:20:9.5308E-3:50:12:6:6:18 0/0:45:3:1:2:28:10.71%:28:1.1818E-1:42:25:16:9:28 0/0:41:5:1:4:25:20%:17:2.5076E-2:42:20:8:12:26 0/0:58:5:3:2:35:14.29%:30:2.6822E-2:45:30:18:12:35 0/1:55:10:3:7:36:27.78%:33:4.7404E-4:47:26:14:12:36 0/1:50:14:9:5:31:45.16%:50:9.1194E-6:46:17:10:7:32 0/1:49:12:4:8:37:32.43%:40:8.4418E-5:46:25:17:8:37 0/0:60:4:2:2:25:16%:21:5.4928E-2:43:21:5:16:27 0/1:55:7:5:2:32:21.88%:22:5.4182E-3:47:25:13:12:32 0/0:48:6:1:5:34:17.14%:25:1.238E-2:45:29:15:14:36 0/1:43:8:2:6:30:25.81%:26:2.3332E-3:44:23:14:9:31 0/1:56:7:6:1:21:33.33%:23:4.3101E-3:52:14:8:6:21 0/0:49:6:3:3:29:20.69%:18:1.1736E-2:42:23:11:12:29 0/1:47:9:5:4:41:21.95%:29:1.1955E-3:45:32:21:11:42 0/0:49:3:1:2:21:14.29%:19:1.1585E-1:47:18:10:8:21 0/1:53:10:6:4:30:33.33%:33:3.9851E-4:40:20:9:11:30 0/0:60:1:1:0:19:5.26%:28:5E-1:39:18:5:13:19 0/0:37:1:0:1:17:5.88%:24:5E-1:51:16:4:12:17 0/0:52:3:1:2:21:14.29%:16:1.1538E-1:47:17:8:9:22 0/0:54:4:3:1:27:14.81%:23:5.5494E-2:47:23:12:11:27 0/0:53:3:2:1:13:23.08%:9:1.1E-1:48:10:7:3:13 0/1:53:7:3:4:31:22.58%:22:5.3469E-3:45:24:14:10:31 0/0:47:4:1:3:40:10%:40:5.7784E-2:41:36:20:16:40 0/0:42:2:2:0:24:8.33%:27:2.4468E-1:45:22:13:9:24 0/1:48:7:2:5:29:24.14%:22:5.1909E-3:46:22:10:12:29 0/1:52:7:4:3:29:24.14%:22:5.1909E-3:50:22:12:10:29 0/1:40:7:6:1:30:23.33%:22:5.2713E-3:43:23:13:10:30 0/0:60:2:0:2:19:10.53%:21:2.4324E-1:47:17:10:7:19 0/0:46:5:2:3:22:22.73%:12:2.4248E-2:42:17:6:11:22 0/1:50:11:3:8:41:26.83%:36:2.2563E-4:44:30:18:12:41 0/1:49:7:2:5:29:24.14%:22:5.1909E-3:44:22:10:12:29 0/0:54:4:3:1:22:18.18%:15:5.3885E-2:46:18:10:8:22 0/0:50:5:2:3:25:20%:17:2.5076E-2:39:20:8:12:27 0/0:50:5:3:2:25:20%:17:2.5076E-2:43:20:14:6:25 0/1:45:14:4:10:31:45.16%:50:9.1194E-6:38:17:9:8:31 0/0:42:2:2:0:11:18.18%:10:2.381E-1:48:9:7:2:12 0/0:48:4:2:2:25:16%:21:5.4928E-2:51:21:13:8:27 0/0:46:6:2:4:27:22.22%:16:1.1461E-2:48:21:7:14:27 0/0:53:3:2:1:22:13.64%:19:1.1628E-1:45:19:9:10:22 0/0:51:5:2:3:17:29.41%:8:2.2239E-2:48:12:8:4:17 0/0:39:6:2:4:42:13.95%:36:1.2967E-2:41:37:23:14:43 0/0:37:2:0:2:22:9.09%:24:2.4419E-1:41:20:10:10:22 0/1:49:13:5:8:31:41.94%:46:2.4825E-5:40:18:11:7:31 0/1:57:7:5:2:26:26.92%:23:4.9169E-3:44:19:12:7:26 0/0:48:6:3:3:20:30%:7:1.0098E-2:42:14:10:4:20 0/1:55:7:6:1:27:25.93%:22:5.0143E-3:40:20:12:8:28 0/0:60:2:0:2:18:11.11%:18:2.4286E-1:42:16:4:12:18 0/0:37:1:0:1:30:3.33%:44:5E-1:43:29:16:13:30 0/0:55:6:3:3:20:30%:7:1.0098E-2:43:14:8:6:20 0/0:41:4:3:1:28:14.29%:23:5.5746E-2:43:24:11:13:28 0/1:46:7:4:3:20:35%:23:4.158E-3:46:13:5:8:21 0/0:60:1:0:1:20:5%:27:5E-1:39:19:9:10:20 0/0:39:1:1:0:19:5.26%:28:5E-1:43:18:12:6:19 0/0:51:5:0:5:28:17.86%:19:2.5729E-2:43:23:11:12:29 0/0:49:5:2:3:24:20.83%:14:2.4823E-2:42:19:7:12:25 0/0:44:6:3:3:29:20.69%:18:1.1736E-2:45:23:10:13:30 0/1:44:9:5:4:27:33.33%:30:8.8132E-4:44:18:11:7:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/1:47:9:5:4:34:26.47%:29:1.0644E-3:45:25:14:11:35 0/0:37:3:1:2:15:20%:11:1.1207E-1:46:12:8:4:16 0/1:43:7:4:3:29:24.14%:22:5.1909E-3:42:22:14:8:29 0/1:46:7:2:5:39:17.95%:22:5.8219E-3:45:32:14:18:39 0/1:42:8:3:5:38:20.51%:25:2.624E-3:39:31:22:9:39 0/0:41:5:1:4:31:16.13%:24:2.6257E-2:43:26:15:11:33 0/0:55:2:2:0:17:11.76%:18:2.4242E-1:39:15:8:7:17 0/0:60:2:1:1:36:5.56%:47:2.4638E-1:41:33:20:13:36 0/0:39:1:0:1:15:6.67%:21:5E-1:39:14:9:5:15 0/1:42:7:3:4:44:15.56%:22:6.0738E-3:43:38:18:20:46 0/1:48:8:5:3:44:18.18%:25:2.7573E-3:47:36:17:19:46 0/0:37:2:0:2:19:10%:21:2.4359E-1:46:18:10:8:20 0/0:49:2:1:1:18:11.11%:18:2.4286E-1:41:16:9:7:19 0/0:43:6:4:2:36:16.67%:25:1.2467E-2:37:30:18:12:37 0/0:54:4:2:2:16:25%:8:5.0612E-2:40:12:6:6:18 0/0:52:3:0:3:35:8.57%:40:1.1957E-1:40:32:21:11:36 0/0:43:4:2:2:34:11.76%:31:5.6946E-2:41:30:13:17:34 0/0:55:5:1:4:38:13.16%:32:2.7169E-2:39:33:16:17:40 0/0:37:1:1:0:25:4%:38:5E-1:40:24:14:10:27 0/1:53:7:3:4:36:19.44%:22:5.6667E-3:39:29:16:13:38 0/0:44:3:0:3:24:12.5%:22:1.1702E-1:41:21:9:12:25 0/1:50:10:4:6:36:27.78%:33:4.7404E-4:42:26:15:11:36 0/0:60:1:1:0:20:5%:27:5E-1:41:19:10:9:23 0/0:44:3:1:2:27:11.11%:28:1.1792E-1:37:24:14:10:28 0/1:50:9:5:4:34:26.47%:29:1.0644E-3:40:25:12:13:36 0/0:53:4:2:2:21:19.05%:15:5.3471E-2:47:17:5:12:23 0/0:37:2:1:1:31:6.45%:40:2.459E-1:38:29:14:15:31 0/0:46:5:2:3:32:15.62%:24:2.6412E-2:43:27:16:11:35 0/0:50:5:3:2:25:20%:17:2.5076E-2:39:20:10:10:26 0/1:51:12:7:5:50:24%:39:1.1557E-4:41:38:25:13:52 0/0:48:2:0:2:20:10%:21:2.4359E-1:40:18:6:12:20 0/0:45:3:1:2:29:10.34%:31:1.1842E-1:41:26:17:9:30 0/0:60:4:4:0:22:18.18%:15:5.3885E-2:41:18:12:6:22 0/1:47:9:5:4:33:27.27%:29:1.042E-3:46:24:11:13:33 0/0:45:3:1:2:28:10.71%:28:1.1818E-1:41:25:14:11:30 0/0:53:3:0:3:15:20%:11:1.1207E-1:40:12:5:7:15 0/0:60:1:0:1:19:5.26%:28:5E-1:43:18:11:7:19 0/0:47:5:0:5:29:17.24%:22:2.5917E-2:45:24:14:10:29 0/0:54:4:3:1:36:11.11%:34:5.7257E-2:40:32:17:15:37 0/0:37:2:1:1:27:7.41%:34:2.4528E-1:44:25:13:12:28 MTB_anc 2462836 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|mmpS3_Rv2198c|gene2237|transcript|Transcript_gene2237|Coding|1/1|c.212T>C|p.Val71Ala|212/900|212/900|71/299||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2462836A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2462836A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:13:0%:25:1E0:49:13:5:8:13 0/0:0:0:0:0:46:0%:85:1E0:45:46:21:25:48 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:41:0%:78:1E0:47:41:23:18:42 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:20 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:31 0/0:0:0:0:0:17:0%:33:1E0:49:17:11:6:17 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:20 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:44 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:12:24:37 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:26 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:18 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:25 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:31 0/0:0:0:0:0:22:0%:40:1E0:39:22:5:17:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:5:23:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:8:21:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:43 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:47 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:51 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:26 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:39 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:20 0/0:0:0:0:0:21:0%:40:1E0:37:21:5:16:21 0/0:0:0:0:0:37:0%:70:1E0:39:37:12:25:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:9:23:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:40 0/0:0:0:0:0:36:0%:66:1E0:38:36:6:30:36 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:14 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:17 0/0:0:0:0:0:28:0%:51:1E0:39:28:9:19:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:38 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:44 0/0:0:0:0:0:19:0%:37:1E0:44:19:7:12:19 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:50 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:16 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:21 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:36 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:32 0/0:0:0:0:0:13:0%:25:1E0:49:13:4:9:14 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:7:21:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:24 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:29:0%:55:1E0:39:29:3:26:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:10:0%:17:1E0:45:10:8:2:10 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:29 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:14 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:18:0%:32:1E0:40:18:4:14:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:42 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:29 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:21 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 0/0:0:0:0:0:14:0%:25:1E0:38:14:2:12:14 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:19:0%:37:1E0:44:19:7:12:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:10:25:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:29 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:30 0/0:0:0:0:0:26:0%:47:1E0:36:26:9:17:28 0/0:0:0:0:0:38:0%:70:1E0:38:38:16:22:38 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:7:20:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:20 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:50 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:46 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:35 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:40 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:37 0/0:0:0:0:0:37:0%:70:1E0:38:37:13:24:39 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:25 0/0:0:0:0:0:39:0%:74:1E0:39:39:17:22:39 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:25 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:42 0/0:0:0:0:0:36:0%:66:1E0:37:36:11:25:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:32 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:32 0/0:0:0:0:0:37:0%:70:1E0:38:37:15:22:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:7:23:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:40:0%:74:1E0:37:40:21:19:41 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:49:0%:93:1E0:44:49:20:29:49 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:40 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:42 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:29 MTB_anc 2468352 . C A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|Rv2203_Rv2203|gene2242|transcript|Transcript_gene2242|Coding|1/1|c.122C>A|p.Pro41Gln|122/693|122/693|41/230||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2468352C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2468352C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:45 0/0:0:0:0:0:15:0%:29:1E0:50:15:7:8:15 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:0:0:0:0:12:0%:21:1E0:42:12:6:6:12 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:32:1:1:0:20:5%:27:5E-1:40:19:8:11:20 0/0:0:0:0:0:40:0%:74:1E0:39:40:24:16:40 0/0:0:0:0:0:13:0%:25:1E0:41:13:5:8:13 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:45 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:22 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:37:34:24:10:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:25:13:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:28 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:38 0/0:60:1:0:1:27:3.7%:41:5E-1:43:26:11:15:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:18:7:25 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:16 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:59:0%:99:1E0:44:59:26:33:59 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:38 0/0:0:0:0:0:35:0%:67:1E0:38:35:14:21:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:29 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:37 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:44 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:42 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:17 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:15:0%:29:1E0:42:15:8:7:16 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:22:0%:40:1E0:38:22:8:14:22 0/0:0:0:0:0:49:0%:93:1E0:39:49:24:25:51 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:44:0%:81:1E0:38:44:27:17:44 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:43 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 0/0:0:0:0:0:41:0%:78:1E0:41:41:28:13:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:17 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:42 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:22 0/0:0:0:0:0:42:0%:77:1E0:37:42:22:20:42 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:38:1:0:1:35:2.86%:55:5E-1:39:34:20:14:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:43 0/0:37:1:0:1:25:4%:38:5E-1:44:24:15:9:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:37:1:0:1:38:2.63%:58:5E-1:40:37:23:14:38 0/0:0:0:0:0:32:0%:59:1E0:37:32:16:16:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:17:0%:33:1E0:42:17:10:7:17 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:29 0/0:0:0:0:0:41:0%:78:1E0:38:41:24:17:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:17 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:34 0/0:0:0:0:0:29:0%:55:1E0:38:29:21:8:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:26 0/0:0:0:0:0:13:0%:25:1E0:45:13:7:6:13 0/0:0:0:0:0:18:0%:32:1E0:37:18:12:6:18 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:31 0/0:60:1:0:1:24:4.17%:34:5E-1:48:23:11:12:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:22 0/0:0:0:0:0:18:0%:32:1E0:36:18:6:12:19 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:28 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:43 0/0:0:0:0:0:27:0%:52:1E0:38:27:17:10:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:29 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:23 0/0:0:0:0:0:50:0%:92:1E0:36:50:28:22:51 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:26 0/0:0:0:0:0:34:0%:62:1E0:36:34:16:18:35 0/0:0:0:0:0:27:0%:52:1E0:35:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:34 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:25 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:20:9:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:35:0%:67:1E0:37:35:22:13:36 0/0:0:0:0:0:18:0%:32:1E0:35:18:10:8:18 0/0:39:1:0:1:28:3.57%:41:5E-1:41:27:14:13:29 0/0:0:0:0:0:42:0%:77:1E0:37:42:29:13:42 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:39:0%:74:1E0:38:39:24:15:39 0/0:38:1:1:0:45:2.22%:73:5E-1:37:44:30:14:47 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:36 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:19 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:39 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:47 0/0:0:0:0:0:42:0%:77:1E0:37:42:27:15:43 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:36 MTB_anc 2470591 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv2205c_Rv2205c-Rv2206_Rv2206|gene2244-gene2245|intergenic_region|gene2244-gene2245|||n.2470591C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:34 1/1:47:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:46 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:34:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:36 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:27 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:36 1/1:40:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:32 1/1:35:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:23 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:48 1/1:43:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:11 1/1:37:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:53 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:28 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:15 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:18 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:32 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:32 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:43:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:66 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:40 1/1:38:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:53 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:26 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:52 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:43 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:51 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:39 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:48 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:41 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:44 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:46 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:38 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:40 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:23 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:39:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:54 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:28 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:41 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:28 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:41 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:20 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:22 1/1:38:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:30 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:27 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:26 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:32 1/1:36:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:32 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:36:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:38 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:36 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:43 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:23 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:45 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:33 1/1:35:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:26 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:28 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:35 1/1:35:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:36 1/1:36:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:36:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:38 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:32 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:35 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:29 1/1:36:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:49 1/1:38:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:36:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:39 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:35:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:38 1/1:37:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:53 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:28 MTB_anc 2471407 . A C . PASS AC=10;AF=0.033;AN=300;ANN=C|intergenic_region|MODIFIER|Rv2206_Rv2206-cobT_Rv2207|gene2245-gene2246|intergenic_region|gene2245-gene2246|||n.2471407A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:49 0/0:0:0:0:0:14:0%:25:1E0:53:14:5:9:14 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:51 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:25:0%:48:1E0:46:25:18:7:25 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:18 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:13:0%:25:1E0:40:13:9:4:13 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:47 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:36 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:22 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:18:0%:32:1E0:43:18:14:4:19 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:22:0%:40:1E0:51:22:8:14:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:34 0/0:0:0:0:0:10:0%:17:1E0:41:10:2:8:10 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:14:6:20 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:40 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:31 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:43:35:10:25:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:46 0/0:0:0:0:0:58:0%:99:1E0:45:58:32:26:59 0/0:0:0:0:0:44:0%:81:1E0:44:44:28:16:44 0/0:0:0:0:0:50:0%:92:1E0:44:50:29:21:50 0/0:0:0:0:0:40:0%:74:1E0:42:40:27:13:40 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:57:0%:99:1E0:40:57:32:25:59 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:43 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:34 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:52 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:23 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:36 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:21 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:41 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:47 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:45 0/0:0:0:0:0:20:0%:36:1E0:41:20:17:3:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:19:0%:37:1E0:51:19:9:10:19 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:43 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:31 0/0:24:1:0:1:29:3.45%:45:5E-1:44:28:12:16:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:44 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:37:24:16:8:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:23:0%:44:1E0:49:23:8:15:23 0/0:0:0:0:0:47:0%:89:1E0:39:47:24:23:47 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:28 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:41 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:27:0%:52:1E0:37:27:20:7:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:26:16:44 0/0:0:0:0:0:20:0%:36:1E0:40:20:14:6:22 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:26:0%:47:1E0:37:26:18:8:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:14:8:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:39 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:20 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:24 0/0:0:0:0:0:42:0%:77:1E0:38:42:23:19:42 0/0:0:0:0:0:21:0%:40:1E0:39:21:15:6:22 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:35 0/0:0:0:0:0:24:0%:44:1E0:39:24:18:6:25 0/0:0:0:0:0:55:0%:99:1E0:42:55:34:21:55 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:47:0%:89:1E0:37:47:28:19:50 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:28 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:37:29:20:9:30 0/0:0:0:0:0:60:0%:99:1E0:37:60:40:20:62 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:31 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:36 0/0:0:0:0:0:27:0%:52:1E0:35:27:16:11:29 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:36:0%:66:1E0:36:36:22:14:37 1/1:38:33:22:11:34:97.06%:99:1.2301E-18:28:1:1:0:34 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:29 0/0:0:0:0:0:38:0%:70:1E0:38:38:24:14:40 0/0:0:0:0:0:44:0%:81:1E0:36:44:32:12:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:28 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:24 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:23:11:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:32 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:39:42:26:16:43 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 MTB_anc 2471620 . G A . PASS AC=100;AF=0.333;AN=300;ANN=A|synonymous_variant|LOW|cobT_Rv2207|gene2246|transcript|Transcript_gene2246|Coding|1/1|c.210G>A|p.Arg70Arg|210/1086|210/1086|70/361||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2471620G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2471620G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:40:39:25:14:39 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 1/1:40:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:46 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:19 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:21 0/0:0:0:0:0:26:0%:47:1E0:45:26:18:8:27 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:18:0%:32:1E0:43:18:13:5:18 0/0:60:1:0:1:28:3.57%:41:5E-1:47:27:10:17:28 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:16 0/0:0:0:0:0:31:0%:59:1E0:39:31:11:20:32 0/0:60:1:1:0:14:7.14%:17:5E-1:48:13:7:6:14 0/0:0:0:0:0:53:0%:99:1E0:42:53:32:21:54 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:23 0/0:0:0:0:0:18:0%:32:1E0:40:18:12:6:18 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:18 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:38:0%:70:1E0:44:38:26:12:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:18 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:23 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:41 1/1:44:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:42:0%:77:1E0:41:42:15:27:45 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:43:0%:82:1E0:48:43:23:20:44 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:42 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:33 0/0:0:0:0:0:27:0%:47:1E0:41:26:9:17:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:36 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:47 0/0:0:0:0:0:39:0%:74:1E0:47:39:15:24:41 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:40:0%:74:1E0:37:40:19:21:42 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:44 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:48:0%:89:1E0:44:48:19:29:49 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:43 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:35 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:33 0/0:0:0:0:0:53:0%:99:1E0:43:53:25:28:54 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:28 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:20:7:27 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:16 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:26:0%:47:1E0:50:26:15:11:26 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:15 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:41:0%:78:1E0:38:41:19:22:42 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:11:0%:22:1E0:44:11:6:5:12 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:28 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:48:0%:89:1E0:42:48:24:24:49 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:29 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:22 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:31 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:49:0%:93:1E0:42:49:30:19:51 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:42 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:19 0/0:0:0:0:0:46:0%:85:1E0:37:46:22:24:50 1/1:36:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:23 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:36 0/0:0:0:0:0:54:0%:99:1E0:36:54:28:26:54 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:40 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:58:0%:99:1E0:43:58:23:35:59 0/0:0:0:0:0:51:0%:97:1E0:40:51:23:28:52 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 MTB_anc 2472939 . A C . PASS AC=16;AF=0.053;AN=300;ANN=C|synonymous_variant|LOW|cobS_Rv2208|gene2247|transcript|Transcript_gene2247|Coding|1/1|c.447A>C|p.Val149Val|447/750|447/750|149/249||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2472939A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2472939A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:44 0/0:0:0:0:0:22:0%:40:1E0:45:22:7:15:22 0/0:0:0:0:0:49:0%:93:1E0:44:49:29:20:50 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:29:0%:55:1E0:47:29:20:9:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:28 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:28 0/0:0:0:0:0:22:0%:40:1E0:41:22:8:14:22 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:37 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:22 0/0:0:0:0:0:46:0%:85:1E0:45:46:19:27:46 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:27 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:16:0%:29:1E0:50:16:7:9:16 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:34 0/0:0:0:0:0:14:0%:25:1E0:46:14:7:7:14 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:48 0/0:0:0:0:0:50:0%:92:1E0:44:50:20:30:51 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:25:17:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:5:13:19 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:43 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:44 0/0:0:0:0:0:14:0%:25:1E0:39:14:5:9:15 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:29 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:21 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:44 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:54 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:41 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:0:0:0:0:13:0%:25:1E0:42:13:5:8:13 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:26 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:46 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:44:0%:81:1E0:39:44:25:19:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:45 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:18 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:16:6:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:45 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:38 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:48 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:32 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:37:33:21:12:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:39 0/0:0:0:0:0:20:0%:36:1E0:39:20:5:15:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:40:39:15:24:42 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:38 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:44 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:25 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:46:0%:85:1E0:40:46:15:31:46 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:17 0/0:0:0:0:0:41:0%:78:1E0:39:41:16:25:43 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:29 0/0:0:0:0:0:36:0%:66:1E0:37:36:14:22:37 1/1:38:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:45 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:23 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:32 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:20 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:38 0/0:0:0:0:0:48:0%:89:1E0:38:48:22:26:48 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:52:0%:96:1E0:40:52:26:26:52 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:26 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:23 0/0:0:0:0:0:15:0%:29:1E0:42:15:6:9:15 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:47:0%:89:1E0:40:47:19:28:47 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:46 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:39 MTB_anc 2472956 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|cobS_Rv2208|gene2247|transcript|Transcript_gene2247|Coding|1/1|c.464C>T|p.Ser155Leu|464/750|464/750|155/249||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2472956C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2472956C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:47:24:23:48:97.92%:99:7.6145E-27:38:1:0:1:49 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 2477049 . C T . PASS AC=7;AF=0.023;AN=300;ANN=T|missense_variant|MODERATE|gcvT_Rv2211c|gene2250|transcript|Transcript_gene2250|Coding|1/1|c.133G>A|p.Val45Ile|133/1140|133/1140|45/379||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2477049C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2477049C>T||||||;HOM=0;NC=0;set-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:27:2:0:2:54:3.7%:77:2.4766E-1:43:52:24:28:55 0/1:33:7:0:7:25:28%:23:4.8126E-3:50:18:8:10:26 0/0:35:3:0:3:34:8.82%:37:1.194E-1:48:31:13:18:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:34 0/0:37:1:0:1:21:4.76%:31:5E-1:45:20:9:11:21 0/0:32:3:0:3:31:9.68%:34:1.1885E-1:47:28:11:17:34 0/0:33:6:0:6:32:18.75%:20:1.2087E-2:52:26:14:12:33 0/0:34:4:0:4:18:22.22%:10:5.1948E-2:46:14:4:10:19 0/0:26:1:0:1:26:3.85%:38:5E-1:49:25:11:14:26 0/0:35:2:0:2:33:6.06%:44:2.4615E-1:47:31:15:16:33 0/0:36:3:0:3:39:7.69%:47:1.2013E-1:45:36:15:21:39 0/0:34:1:0:1:41:2.44%:66:5E-1:47:40:21:19:43 0/0:34:5:0:5:20:25%:10:2.3562E-2:51:15:5:10:21 0/1:33:7:0:7:49:14.29%:22:6.2092E-3:45:42:25:17:52 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:21 0/0:36:2:0:2:32:6.25%:40:2.4603E-1:46:30:13:17:34 0/0:32:5:0:5:35:14.29%:30:2.6822E-2:43:30:14:16:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:28:2:0:2:22:9.09%:24:2.4419E-1:44:20:8:12:26 0/0:33:3:0:3:28:10.71%:28:1.1818E-1:47:25:11:14:30 0/0:31:1:0:1:24:4.17%:34:5E-1:40:23:11:12:26 0/0:34:2:0:2:48:4.17%:67:2.4737E-1:43:46:18:28:52 0/0:32:4:0:4:35:11.43%:35:5.7106E-2:45:31:16:15:36 0/1:34:8:0:8:36:22.22%:25:2.5282E-3:47:28:12:16:39 0/0:30:1:0:1:27:3.7%:41:5E-1:44:26:10:16:28 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:17 0/0:24:1:0:1:25:4%:38:5E-1:44:24:11:13:27 0/0:35:2:0:2:17:11.76%:18:2.4242E-1:46:15:7:8:17 0/0:31:1:0:1:33:3.03%:52:5E-1:43:32:14:18:34 0/0:24:1:0:1:39:2.56%:62:5E-1:46:38:19:19:40 0/0:35:1:0:1:35:2.86%:55:5E-1:48:34:13:21:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:34:5:0:5:35:14.29%:30:2.6822E-2:42:30:11:19:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:27 0/0:34:5:0:5:36:13.89%:29:2.6944E-2:48:31:20:11:37 0/0:34:3:0:3:39:7.69%:47:1.2013E-1:43:36:16:20:39 0/0:28:1:0:1:35:2.86%:55:5E-1:43:34:23:11:36 0/1:33:12:0:12:63:19.05%:38:1.3705E-4:46:51:25:26:66 0/0:32:5:0:5:41:12.2%:38:2.7465E-2:45:36:16:20:43 0/0:34:4:0:4:45:8.89%:50:5.8311E-2:44:41:20:21:45 0/0:37:1:0:1:33:3.03%:52:5E-1:41:32:12:20:34 0/0:30:4:0:4:36:11.11%:34:5.7257E-2:44:32:14:18:38 0/0:37:1:0:1:26:3.85%:38:5E-1:44:25:13:12:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:38:1:0:1:32:3.12%:48:5E-1:42:31:9:22:33 0/0:33:3:0:3:26:11.54%:25:1.1765E-1:42:23:12:11:27 0/0:31:2:0:2:36:5.56%:47:2.4648E-1:42:34:17:17:36 0/0:31:1:0:1:34:2.94%:51:5E-1:44:33:13:20:35 0/1:31:8:0:8:49:16.33%:25:2.8658E-3:45:41:21:20:50 0/0:34:1:0:1:23:4.35%:34:5E-1:46:22:10:12:25 0/0:34:1:0:1:34:2.94%:51:5E-1:43:33:15:18:35 0/0:37:1:0:1:30:3.33%:44:5E-1:45:29:14:15:30 0/0:30:2:0:2:50:4%:70:2.4747E-1:44:48:23:25:51 0/0:34:3:0:3:33:9.09%:37:1.1923E-1:43:30:17:13:34 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:52 0/0:31:2:0:2:35:5.71%:47:2.4638E-1:41:33:13:20:36 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:22 0/0:26:1:0:1:38:2.63%:58:5E-1:41:37:19:18:40 0/0:35:6:0:6:32:18.75%:20:1.2087E-2:50:26:17:9:34 0/0:31:3:0:3:33:9.09%:37:1.1923E-1:46:30:18:12:35 0/0:33:3:0:3:43:6.98%:53:1.2059E-1:44:40:18:22:43 0/0:27:3:0:3:52:5.77%:66:1.2136E-1:44:49:23:26:53 0/0:29:3:0:3:31:9.68%:34:1.1885E-1:45:28:13:15:32 0/1:32:8:0:8:40:20%:25:2.653E-3:45:32:15:17:41 0/0:34:5:0:5:42:11.9%:38:2.7555E-2:46:37:17:20:43 0/0:34:2:0:2:30:6.67%:37:2.4576E-1:43:28:14:14:31 0/0:33:3:0:3:36:8.33%:40:1.1972E-1:43:33:17:16:38 0/0:32:2:0:2:23:8.7%:28:2.4444E-1:48:21:12:9:23 0/0:31:2:0:2:29:6.9%:37:2.4561E-1:42:27:12:15:30 0/0:30:5:0:5:32:15.62%:24:2.6412E-2:47:27:12:15:34 0/0:33:3:0:3:34:8.82%:37:1.194E-1:50:31:20:11:35 0/0:34:3:0:3:30:10%:31:1.1864E-1:50:27:12:15:31 0/0:37:2:0:2:33:6.06%:44:2.4615E-1:45:31:19:12:33 0/0:29:1:0:1:39:2.56%:62:5E-1:43:38:16:22:40 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:33 0/0:31:3:0:3:33:9.09%:37:1.1923E-1:41:30:16:14:33 0/0:30:5:0:5:31:16.13%:24:2.6257E-2:49:26:13:13:31 0/0:35:2:0:2:32:6.25%:40:2.4603E-1:43:30:9:21:33 0/0:0:0:0:0:21:0%:40:1E0:50:21:11:10:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:20:7:31 0/0:31:2:0:2:47:4.26%:67:2.4731E-1:43:45:25:20:49 0/0:32:2:0:2:38:5.26%:50:2.4667E-1:41:36:18:18:39 0/0:32:2:0:2:29:6.9%:37:2.4561E-1:48:27:14:13:31 0/0:31:3:0:3:35:8.57%:40:1.1957E-1:46:32:15:17:37 0/0:34:4:0:4:42:9.52%:43:5.801E-2:43:38:24:14:43 0/0:38:1:0:1:28:3.57%:41:5E-1:44:27:7:20:28 0/0:33:5:0:5:19:26.32%:10:2.3166E-2:46:14:5:9:19 0/0:34:6:0:6:42:14.29%:33:1.2905E-2:50:36:17:19:42 0/0:31:4:0:4:29:13.79%:26:5.5981E-2:48:25:8:17:30 0/0:33:4:0:4:26:15.38%:20:5.5222E-2:44:22:10:12:26 0/0:30:3:0:3:31:9.68%:34:1.1885E-1:50:28:15:13:31 0/0:33:3:0:3:50:6%:62:1.2121E-1:42:47:19:28:52 0/0:37:2:0:2:29:6.9%:37:2.4561E-1:45:27:10:17:29 0/0:37:1:0:1:48:2.08%:76:5E-1:44:47:23:24:49 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:33:1:0:1:28:3.57%:41:5E-1:45:27:13:14:28 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:42 0/0:34:2:0:2:27:7.41%:34:2.4528E-1:42:25:14:11:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:37:1:0:1:31:3.23%:48:5E-1:46:30:15:15:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:30 0/0:34:4:0:4:33:12.12%:32:5.6777E-2:49:29:10:19:33 0/0:60:1:0:1:29:3.45%:41:5E-1:46:27:9:18:29 0/0:34:2:0:2:38:5.26%:50:2.4667E-1:45:36:18:18:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:32:2:0:2:38:5.26%:50:2.4667E-1:45:36:16:20:38 0/0:31:1:0:1:31:3.23%:48:5E-1:46:30:16:14:31 0/0:37:1:0:1:18:5.56%:24:5E-1:37:17:10:7:18 0/0:33:2:0:2:41:4.88%:57:2.4691E-1:45:39:20:19:42 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:40 0/0:0:0:0:0:31:0%:59:1E0:36:31:15:16:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:15:25:41 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:23 0/0:33:1:0:1:65:1.54%:99:5E-1:41:64:35:29:66 0/0:31:1:0:1:62:1.61%:99:5E-1:41:61:28:33:62 0/0:24:1:0:1:24:4.17%:34:5E-1:41:23:8:15:24 0/0:0:0:0:0:12:0%:21:1E0:35:12:8:4:12 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:45 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:30 0/0:35:1:0:1:50:2%:80:5E-1:41:49:23:26:51 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:24 0/0:37:1:0:1:39:2.56%:62:5E-1:44:38:17:21:40 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:36 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:49 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:37 0/0:0:0:0:0:45:0%:85:1E0:40:45:16:29:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:39 0/0:37:1:0:1:32:3.12%:48:5E-1:45:31:12:19:35 0/0:33:4:0:4:59:6.78%:72:5.9309E-2:42:55:19:36:60 0/0:37:3:0:3:37:8.11%:43:1.1986E-1:43:34:10:24:38 0/0:35:2:0:2:37:5.41%:50:2.4658E-1:40:35:18:17:38 0/1:35:7:0:7:46:15.22%:22:6.1097E-3:40:39:20:19:49 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:43 0/0:31:3:0:3:29:10.34%:31:1.1842E-1:46:26:13:13:29 0/0:37:4:0:4:43:9.3%:47:5.8115E-2:41:39:22:17:45 0/0:28:1:0:1:46:2.17%:73:5E-1:45:45:30:15:47 0/0:31:6:0:6:54:11.11%:50:1.3497E-2:40:48:23:25:55 0/0:31:4:0:4:29:13.79%:26:5.5981E-2:39:25:10:15:30 MTB_anc 2490567 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|glnE_Rv2221c|gene2261|transcript|Transcript_gene2261|Coding|1/1|c.1787G>T|p.Gly596Val|1787/2985|1787/2985|596/994||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2490567C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2490567C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:9:14:24:95.83%:99:7.7525E-13:39:1:0:1:24 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:70:28:42:71:98.59%:99:1.0659E-41:0:0:0:0:72 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:48:16:32:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:37:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:39:45:21:24:46:97.83%:99:1.1441E-25:38:1:1:0:47 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:21:6:15:22:95.45%:99:1.0931E-11:33:1:0:1:24 1/1:39:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:46:20:26:47:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 2494405 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv2223c_Rv2223c|gene2263|transcript|Transcript_gene2263|Coding|1/1|c.995C>A|p.Thr332Lys|995/1563|995/1563|332/520||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2494405G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2494405G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:44:54:26:28:56 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:29 0/0:0:0:0:0:58:0%:99:1E0:43:58:28:30:58 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:54 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:33 0/0:0:0:0:0:52:0%:96:1E0:41:52:34:18:53 0/0:0:0:0:0:17:0%:33:1E0:49:17:3:14:17 0/0:0:0:0:0:46:0%:85:1E0:44:46:25:21:48 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:43 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:30 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:58:0%:99:1E0:42:58:29:29:58 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:27:0%:52:1E0:49:27:7:20:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:48 0/0:0:0:0:0:55:0%:99:1E0:47:55:31:24:55 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:49:0%:93:1E0:46:49:25:24:50 0/0:0:0:0:0:44:0%:81:1E0:41:44:30:14:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:37 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:67:0%:99:1E0:43:67:37:30:67 0/0:0:0:0:0:50:0%:92:1E0:43:50:24:26:51 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:42 0/0:0:0:0:0:26:0%:47:1E0:43:26:7:19:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:33:1:0:1:56:1.79%:91:5E-1:45:55:21:34:56 0/0:0:0:0:0:44:0%:81:1E0:48:44:23:21:45 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:45 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:25 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:28 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:43 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:22 0/0:0:0:0:0:43:0%:82:1E0:45:43:28:15:43 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:23 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:36 0/0:0:0:0:0:33:0%:63:1E0:53:33:17:16:34 0/0:0:0:0:0:16:0%:29:1E0:52:16:8:8:16 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:45 0/0:0:0:0:0:40:0%:74:1E0:47:40:17:23:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:32 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:47 0/0:38:1:0:1:38:2.63%:58:5E-1:44:37:23:14:39 0/0:0:0:0:0:48:0%:89:1E0:52:48:23:25:48 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:45 0/0:0:0:0:0:48:0%:89:1E0:41:48:22:26:48 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:58:0%:99:1E0:41:58:29:29:58 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:54:0%:99:1E0:43:54:22:32:54 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:25 0/0:0:0:0:0:47:0%:89:1E0:40:47:17:30:49 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:42 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 0/0:0:0:0:0:39:0%:74:1E0:46:39:14:25:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:10:23:35 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:22 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:6:14:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:41 0/0:0:0:0:0:48:0%:89:1E0:39:48:24:24:51 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:47 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:35 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:29 0/0:0:0:0:0:64:0%:99:1E0:41:64:33:31:64 0/0:0:0:0:0:60:0%:99:1E0:41:60:30:30:60 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:27 0/0:0:0:0:0:57:0%:99:1E0:40:57:28:29:58 0/0:0:0:0:0:38:0%:70:1E0:38:38:20:18:38 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:49 0/0:0:0:0:0:51:0%:97:1E0:38:51:32:19:52 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:47:0%:89:1E0:40:47:28:19:47 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:44 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:44 0/0:0:0:0:0:50:0%:92:1E0:40:50:28:22:50 0/0:0:0:0:0:41:0%:78:1E0:39:41:27:14:41 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:56:0%:99:1E0:39:56:23:33:56 0/0:0:0:0:0:53:0%:99:1E0:43:53:32:21:54 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:48 0/0:0:0:0:0:45:0%:85:1E0:39:45:26:19:46 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:19 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:37 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:51 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:50 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:34 MTB_anc 2495500 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|caeA_Rv2224c|gene2264|transcript|Transcript_gene2264|Coding|1/1|c.1524G>A|p.Leu508Leu|1524/1563|1524/1563|508/520||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.2495500C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2495500C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2495500C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:52:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:46:23:23:47:97.87%:99:2.4343E-27:0:0:0:0:48 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:52:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:43:27:16:44:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:69:30:39:69:100%:99:4.233E-41:0:0:0:0:70 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 2496006 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|caeA_Rv2224c|gene2264|transcript|Transcript_gene2264|Coding|1/1|c.1018G>A|p.Ala340Thr|1018/1563|1018/1563|340/520||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.2496006C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2496006C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2496006C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:51 0/0:0:0:0:0:18:0%:32:1E0:50:18:13:5:18 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:46 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:29 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:48:26:8:18:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:34:0%:62:1E0:51:34:20:14:35 0/0:0:0:0:0:38:0%:70:1E0:50:38:20:18:39 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:24 0/0:0:0:0:0:54:0%:99:1E0:45:54:20:34:56 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:50 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:26 0/0:38:1:0:1:29:3.45%:45:5E-1:52:28:13:15:30 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:38 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:44 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:6:20:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:57:0%:99:1E0:45:57:32:25:57 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:49 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:48 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:38 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:51 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/1:44:7:5:2:39:17.95%:22:5.8219E-3:42:32:19:13:40 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:21 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 0/0:0:0:0:0:52:0%:96:1E0:42:52:29:23:53 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:47:0%:89:1E0:46:47:26:21:50 0/0:0:0:0:0:54:0%:99:1E0:49:54:26:28:55 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:36 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:45 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:55 0/0:0:0:0:0:37:0%:70:1E0:44:37:13:24:37 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:47 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:17 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:36 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:36 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:46 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:47:0%:89:1E0:46:47:24:23:47 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:40:0%:74:1E0:49:40:18:22:40 0/0:0:0:0:0:15:0%:29:1E0:46:15:5:10:15 0/0:0:0:0:0:51:0%:97:1E0:41:51:24:27:51 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:22 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:36 0/0:0:0:0:0:53:0%:99:1E0:40:53:23:30:54 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:28 0/0:0:0:0:0:60:0%:99:1E0:43:60:30:30:61 0/0:0:0:0:0:53:0%:99:1E0:42:53:23:30:53 0/0:0:0:0:0:16:0%:29:1E0:42:16:5:11:16 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:55:0%:99:1E0:41:55:26:29:57 0/0:0:0:0:0:43:0%:82:1E0:39:43:27:16:43 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:44 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:50 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:47 0/0:0:0:0:0:46:0%:85:1E0:41:46:16:30:52 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:39 0/0:0:0:0:0:50:0%:92:1E0:40:50:28:22:51 0/0:0:0:0:0:44:0%:81:1E0:38:44:22:22:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:41 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:71:0%:99:1E0:39:71:42:29:71 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:34 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:0:0:0:0:43:0%:82:1E0:42:43:27:16:44 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:35 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:52 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:21 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:53 0/0:0:0:0:0:46:0%:85:1E0:41:46:20:26:49 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:42 MTB_anc 2501148 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2227_Rv2227|gene2269|transcript|Transcript_gene2269|Coding|1/1|c.218C>T|p.Ala73Val|218/702|218/702|73/233||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2501148C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2501148C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:52:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:60:22:38:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:62:33:29:63:98.41%:99:1.0605E-35:60:1:0:1:64 1/1:47:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:52:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:37:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:49:23:26:49:100%:99:3.925E-29:0:0:0:0:52 1/1:37:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:48 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:60:21:39:60:100%:99:1.035E-35:0:0:0:0:62 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2501354 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|missense_variant|MODERATE|Rv2227_Rv2227|gene2269|transcript|Transcript_gene2269|Coding|1/1|c.424G>A|p.Gly142Ser|424/702|424/702|142/233||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2501354G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2501354G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:51:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:48:0%:89:1E0:46:48:31:17:49 1/1:53:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:43 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:36 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 1/1:51:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 1/1:48:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:15 0/0:0:0:0:0:32:0%:59:1E0:50:32:13:19:33 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:17:0%:33:1E0:45:17:12:5:17 1/1:46:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:48:24:24:49:97.96%:99:1.9625E-27:38:1:1:0:49 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:24:0%:44:1E0:52:24:8:16:25 1/1:53:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:17:0%:33:1E0:52:17:10:7:17 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:35 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:23 0/0:0:0:0:0:29:0%:55:1E0:50:29:15:14:29 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:40:0%:74:1E0:49:40:21:19:40 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:54 0/0:0:0:0:0:56:0%:99:1E0:49:56:27:29:57 1/1:49:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:25 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:27 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:26:0%:47:1E0:45:26:18:8:26 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:22 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 0/0:0:0:0:0:39:0%:74:1E0:47:39:12:27:39 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:49:2:1:1:64:3.12%:94:2.4803E-1:46:62:31:31:64 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 1/1:55:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:29:0%:55:1E0:53:29:16:13:29 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:39:0%:74:1E0:49:39:20:19:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:41 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:38:1:1:0:29:3.45%:45:5E-1:46:28:13:15:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:21 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:41:0%:78:1E0:45:41:14:27:41 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:38 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:45:23:22:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:61:30:31:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:17:0%:33:1E0:40:17:11:6:17 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:50:30:16:14:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:27 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:22 0/0:0:0:0:0:28:0%:51:1E0:49:28:21:7:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:25 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:11:25:37 0/0:0:0:0:0:44:0%:81:1E0:41:44:27:17:49 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:51:0%:97:1E0:40:51:17:34:52 0/0:0:0:0:0:59:0%:99:1E0:45:59:33:26:60 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:56 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:40 0/0:0:0:0:0:60:0%:99:1E0:42:60:31:29:61 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:30 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:39 0/0:0:0:0:0:41:0%:78:1E0:38:41:25:16:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:43 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 1/1:41:61:23:38:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:43:24:19:44:97.73%:99:1.7144E-24:37:1:1:0:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:37:1:1:0:38:2.63%:58:5E-1:43:37:20:17:40 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:48 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:42 0/0:0:0:0:0:19:0%:37:1E0:44:19:7:12:20 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:49 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:43 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 MTB_anc 2511436 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2239c_Rv2239c|gene2284|transcript|Transcript_gene2284|Coding|1/1|c.217G>T|p.Val73Phe|217/477|217/477|73/158||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2511436C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2511436C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:20:11:9:21:95.24%:99:4.0873E-11:37:1:0:1:21 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:47:31:16:48:97.92%:99:7.6145E-27:32:1:1:0:48 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:33:18:15:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:29:7:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:51:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:15:14:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:52 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:41 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 MTB_anc 2511712 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2240c_Rv2240c|gene2285|transcript|Transcript_gene2285|Coding|1/1|c.569A>C|p.Lys190Thr|569/591|569/591|190/196||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2511712T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2511712T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:37:19:18:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:49:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:30:13:17:31:96.77%:99:6.8754E-17:39:1:1:0:32 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:21:10:11:22:95.45%:99:1.0931E-11:39:1:0:1:22 1/1:41:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:48:18:30:49:97.96%:99:1.554E-28:0:0:0:0:51 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:60:35:25:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 MTB_anc 2515985 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv2242_Rv2242|gene2287|transcript|Transcript_gene2287|Coding|1/1|c.682G>T|p.Val228Phe|682/1245|682/1245|228/414||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2515985G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2515985G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:19:0%:37:1E0:50:19:12:7:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:51:0%:97:1E0:43:51:21:30:52 0/0:0:0:0:0:10:0%:17:1E0:53:10:5:5:10 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:52 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:19 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:48:0%:89:1E0:43:48:18:30:48 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:8:24:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:41 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:36:0%:66:1E0:49:36:13:23:36 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:42 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:49:0%:93:1E0:47:49:23:26:50 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:41:0%:78:1E0:46:41:18:23:42 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:14:26:40 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:53 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:42 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:55:0%:99:1E0:44:55:25:30:55 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:38:0%:70:1E0:47:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:45 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:42:0%:77:1E0:47:42:30:12:42 0/0:0:0:0:0:38:0%:70:1E0:46:38:24:14:38 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:47 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:34:0%:62:1E0:51:34:18:16:34 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:50 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:39 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:64:0%:99:1E0:42:64:28:36:65 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:46 0/0:0:0:0:0:14:0%:25:1E0:41:14:6:8:15 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:40 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:51:0%:97:1E0:42:51:23:28:52 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:27 0/0:0:0:0:0:50:0%:92:1E0:44:50:22:28:50 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:36 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:38 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:39:0%:74:1E0:46:39:25:14:39 0/0:0:0:0:0:22:0%:40:1E0:39:22:16:6:22 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:37 0/0:60:1:1:0:41:2.44%:66:5E-1:44:40:19:21:41 0/0:0:0:0:0:40:0%:74:1E0:38:40:22:18:41 0/0:0:0:0:0:51:0%:97:1E0:39:51:18:33:52 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:40 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:37 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:17 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:48 0/0:0:0:0:0:55:0%:99:1E0:43:55:21:34:56 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:52 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:41 0/0:0:0:0:0:40:0%:74:1E0:39:40:17:23:42 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:43 0/0:0:0:0:0:33:0%:63:1E0:38:33:22:11:35 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:41 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:50:0%:92:1E0:39:50:28:22:51 0/0:0:0:0:0:50:0%:92:1E0:42:50:22:28:51 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:54:0%:99:1E0:39:54:20:34:54 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:27:14:41 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:47:0%:85:1E0:43:46:24:22:47 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:47 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:37 MTB_anc 2518076 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|acpM_Rv2244|gene2290|transcript|Transcript_gene2290|Coding|1/1|c.306C>T|p.Ala102Ala|306/348|306/348|102/115||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2518076C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2518076C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:22:13:9:23:95.65%:99:2.9149E-12:38:1:0:1:24 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:72:45:27:72:100%:99:6.7558E-43:0:0:0:0:74 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:51:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:13:15:29:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:23:12:11:24:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:51:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:32:16:16:33:96.97%:99:4.7095E-18:24:1:1:0:33 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:29:14:15:30:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:63:34:29:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:54:37:17:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:41:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:49:34:15:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:54:30:24:55:98.18%:99:5.6837E-31:60:1:1:0:55 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:52:39:13:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 MTB_anc 2518132 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|kasA_Rv2245|gene2291|transcript|Transcript_gene2291|Coding|1/1|c.18T>C|p.Thr6Thr|18/1251|18/1251|6/416||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2518132T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|isoniazid|||n.2518132T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2518132T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:57:40:17:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:49:31:18:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:32:18:14:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:41:31:10:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:32:20:12:33:96.97%:99:4.7095E-18:33:1:0:1:34 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:42:30:12:43:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:67:46:21:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:43:26:17:44:97.73%:99:1.5066E-25:0:0:0:0:46 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:13:7:6:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:45:30:20:10:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:48:23:25:49:97.96%:99:1.9625E-27:32:1:1:0:50 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:56:39:17:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:38:56:38:18:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:40:23:17:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:51:36:15:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:59:43:16:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:53:38:15:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 2523205 . G GCGC . PASS AC=296;AF=0.987;AN=300;ANN=GCGC|intergenic_region|MODIFIER|Rv2248_Rv2248-glpD1_Rv2249c|gene2294-gene2295|intergenic_region|gene2294-gene2295|||n.2523205_2523206insCGC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:49:26:23:50:98%:99:3.925E-29:0:0:0:0:50 1/1:41:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:17:10:7:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:20:8:12:20:95.24%:99:4.0873E-11:37:1:1:0:21 1/1:50:29:15:14:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:41:32:15:17:34:94.12%:99:2.2142E-17:36:2:0:2:34 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:30:15:15:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:41:25:11:14:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:45:35:21:14:35:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:41:18:7:11:20:90%:87:1.6758E-9:33:2:2:0:20 0/1:43:10:4:6:12:83.33%:44:3.3652E-5:34:2:0:2:12 1/1:45:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 0/1:40:23:11:12:26:88.46%:99:7.3681E-12:32:3:1:2:26 0/1:43:15:8:7:17:88.24%:71:7.3277E-8:33:2:1:1:17 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:21:8:13:22:95.45%:99:1.0931E-11:34:1:1:0:22 1/1:43:48:25:23:47:97.96%:99:1.9625E-27:34:1:0:1:49 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:16:15:32:96.88%:99:1.8007E-17:35:1:0:1:33 1/1:43:14:9:5:15:93.33%:69:1.0315E-7:60:1:0:1:15 1/1:43:30:13:17:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:11:11:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:13:15:28:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:43:40:16:24:42:93.02%:99:2.287E-21:36:3:2:1:43 1/1:44:32:13:19:35:91.43%:99:7.5196E-17:42:3:2:1:35 1/1:42:34:17:17:35:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:21:7:14:22:91.3%:99:1.0931E-11:37:1:1:0:23 1/1:49:21:13:8:23:91.3%:99:3.6437E-11:35:2:1:1:23 1/1:45:42:21:21:43:97.67%:99:6.6289E-24:52:1:1:0:43 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:53:28:25:54:98.15%:99:2.2126E-30:33:1:0:1:54 1/1:43:37:19:18:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:42:43:15:28:44:97.73%:99:1.7144E-24:35:1:1:0:44 1/1:41:38:16:22:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:18:14:35:91.43%:99:2.2142E-17:47:2:1:1:35 1/1:39:21:9:12:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:41:23:18:41:97.62%:99:2.5612E-23:34:1:1:0:42 1/1:41:38:20:18:41:92.68%:99:3.1178E-20:34:3:1:2:41 1/1:40:35:17:18:35:97.22%:99:8.3613E-20:33:1:1:0:36 1/1:44:44:21:23:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:31:13:18:31:96.88%:99:2.1486E-18:0:0:0:0:31 1/1:49:22:9:13:23:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:39:51:27:24:53:98.08%:99:3.3479E-29:33:1:0:1:53 1/1:44:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:29:11:18:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:29:15:14:30:93.55%:99:2.6212E-16:34:1:0:1:31 1/1:42:60:26:34:61:96.77%:99:1.6176E-34:37:1:1:0:62 1/1:40:45:24:21:45:97.83%:99:1.1441E-25:34:1:0:1:46 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:29:15:14:29:93.55%:99:1.1344E-15:47:2:1:1:31 1/1:44:27:12:15:29:93.1%:99:1.5465E-14:47:2:1:1:29 1/1:43:43:19:24:44:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:38:16:22:41:92.68%:99:8.0088E-21:46:2:1:1:41 1/1:42:39:23:16:40:97.5%:99:3.8137E-22:35:1:1:0:40 1/1:45:40:20:20:41:97.56%:99:9.8874E-23:35:1:1:0:41 1/1:45:20:8:12:20:95.24%:99:4.0873E-11:38:1:0:1:21 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:30:14:16:31:96.77%:99:6.8754E-17:35:1:0:1:31 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:16:8:8:16:94.12%:81:7.7134E-9:60:1:0:1:17 1/1:52:21:13:8:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:39:37:19:18:40:90.24%:99:3.5075E-19:34:4:1:3:41 1/1:46:27:14:13:29:90%:99:4.6134E-14:35:3:2:1:30 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:12:15:28:96.43%:99:3.7915E-15:34:1:1:0:28 1/1:44:20:13:7:22:90.91%:99:4.0873E-11:37:1:1:0:22 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:38:18:20:38:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:41:30:15:15:32:90.91%:99:9.89E-16:44:3:1:2:33 1/1:50:25:12:13:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:8:19:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:16:15:33:93.94%:99:8.2416E-17:33:2:0:2:33 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:9:17:27:92.86%:99:1.4382E-14:60:1:0:1:28 1/1:40:49:22:27:51:96.08%:99:3.4484E-27:28:2:1:1:51 1/1:47:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:49:29:20:49:98%:99:5.0549E-28:34:1:0:1:50 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:39:22:17:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:29:11:18:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:17:16:34:97.06%:99:1.2301E-18:35:1:0:1:34 1/1:39:31:17:14:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:33:18:15:34:97.06%:99:1.2301E-18:32:1:1:0:34 1/1:42:29:19:10:31:93.55%:99:1.1344E-15:46:2:1:1:31 1/1:42:38:9:29:39:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:15:21:35:100%:99:2.2598E-21:0:0:0:0:36 0/1:43:32:13:19:35:88.89%:99:7.5196E-17:33:3:0:3:36 1/1:40:23:9:14:24:95.83%:99:7.7525E-13:34:1:1:0:24 1/1:41:21:9:12:22:95.45%:99:1.0931E-11:33:1:0:1:22 1/1:41:30:10:20:32:93.75%:99:3.0612E-16:42:2:1:1:32 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:30:16:14:31:93.75%:99:3.0612E-16:32:2:0:2:33 1/1:38:32:14:18:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:17:15:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:49:20:29:51:96.08%:99:3.4484E-27:29:2:1:1:51 1/1:42:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:30:11:19:32:93.75%:99:6.8754E-17:33:1:1:0:32 1/1:36:34:16:18:33:97.14%:99:3.2089E-19:30:1:0:1:35 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:38:19:19:38:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:36:35:15:20:32:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:42:16:26:43:97.67%:99:6.6289E-24:32:1:0:1:43 1/1:41:28:10:18:29:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:43:33:12:21:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:38:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:43:22:21:42:97.73%:99:1.7144E-24:33:1:0:1:45 1/1:42:28:14:14:29:93.33%:99:4.194E-15:31:2:1:1:30 1/1:41:41:20:21:40:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:39:32:8:24:33:94.12%:99:2.2142E-17:32:2:0:2:34 1/1:43:38:21:17:39:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:38:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:46:22:24:49:93.88%:99:8.6743E-25:31:3:1:2:49 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:17:10:7:18:94.44%:86:2.0936E-9:32:1:1:0:18 1/1:42:25:9:16:25:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:43:25:13:12:27:92.59%:99:2.0853E-13:33:2:0:2:27 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:16:9:7:17:94.12%:81:7.7134E-9:38:1:1:0:17 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:38:18:20:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:51:27:24:51:98.08%:99:3.3479E-29:33:1:0:1:52 1/1:39:31:10:21:31:96.88%:99:1.8007E-17:35:1:0:1:32 MTB_anc 2525722 . CG C . PASS AC=296;AF=0.987;AN=300;ANN=C|frameshift_variant|HIGH|Rv2251_Rv2251|gene2297|transcript|Transcript_gene2297|Coding|1/1|c.163delG|p.Glu55fs|163/1428|163/1428|55/475||INFO_REALIGN_3_PRIME,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2525723delG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2525723delG||||||;LOF=(Rv2251_Rv2251|gene2297|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:57:24:33:58:98.28%:99:9.6072E-33:36:1:1:0:58 1/1:53:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:47:24:23:48:97.92%:99:7.6145E-27:32:1:1:0:48 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:39:20:19:41:95.12%:99:2.1258E-21:37:2:2:0:41 1/1:45:28:16:12:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:23:13:10:24:95.83%:99:7.7525E-13:60:1:1:0:24 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:12:6:6:13:92.31%:58:1.3461E-6:32:1:0:1:13 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:25:11:14:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:14:17:30:96.88%:99:1.8007E-17:72:1:1:0:32 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:41:22:19:42:97.62%:99:2.5612E-23:34:1:1:0:42 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:8:17:26:96.15%:99:5.4444E-14:26:1:1:0:26 1/1:45:35:16:19:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:26:11:15:26:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:29:16:13:31:93.55%:99:1.1344E-15:31:2:2:0:31 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:18:6:12:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:40:27:12:15:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:44:35:7:28:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:48:21:27:49:97.96%:99:1.9625E-27:35:1:1:0:49 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:46:23:23:50:90.2%:99:9.5589E-24:33:5:3:2:51 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:32:16:16:32:96.97%:99:4.7095E-18:30:1:1:0:33 1/1:44:38:19:19:39:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:45:31:15:16:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:43:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:23:16:41:95.12%:99:2.1258E-21:47:2:2:0:41 1/1:43:29:13:16:27:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:29:15:14:31:90.62%:99:3.5714E-15:35:3:2:1:32 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:48:17:31:49:96%:99:1.3143E-26:34:2:1:1:51 1/1:47:39:21:18:40:97.5%:99:3.8137E-22:36:1:1:0:40 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:46:22:24:51:90.2%:99:9.5589E-24:39:5:5:0:51 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:30:14:16:32:93.75%:99:3.0612E-16:34:2:1:1:32 1/1:43:42:17:25:43:97.67%:99:6.6289E-24:33:1:0:1:43 1/1:42:55:32:23:56:98.21%:99:1.4593E-31:33:1:1:0:56 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:49:26:23:50:98%:99:5.0549E-28:35:1:0:1:50 1/1:49:37:19:18:39:94.87%:99:3.0128E-20:32:2:0:2:39 1/1:40:22:9:13:23:95.65%:99:2.9149E-12:35:1:1:0:23 1/1:45:38:21:17:40:95%:99:8.0088E-21:47:2:2:0:40 1/1:41:36:18:18:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:10:17:30:90%:99:4.6134E-14:33:3:1:2:30 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:39:16:23:41:95.12%:99:2.1258E-21:35:2:1:1:41 1/1:47:34:18:16:36:94.44%:99:1.5887E-18:35:2:2:0:36 1/1:46:39:15:24:41:95.12%:99:2.1258E-21:47:2:1:1:41 0/1:46:19:9:10:21:86.36%:89:1.0931E-9:60:3:3:0:22 0/1:48:12:9:3:14:85.71%:55:2.9913E-6:46:2:1:1:14 1/1:47:36:18:18:38:94.74%:99:1.1316E-19:32:2:2:0:38 1/1:51:30:15:15:33:90.91%:99:9.89E-16:51:3:2:1:33 1/1:52:15:9:6:16:93.75%:75:2.8282E-8:60:1:1:0:16 1/1:52:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:56:30:26:57:94.92%:99:2.8822E-31:33:2:0:2:59 1/1:47:29:20:9:31:93.55%:99:1.1344E-15:32:2:1:1:31 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:20:12:35:91.43%:99:7.5196E-17:41:3:1:2:35 1/1:42:29:15:14:32:90.62%:99:3.5714E-15:35:3:2:1:32 1/1:45:25:16:9:26:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:41:49:26:23:49:98%:99:5.0549E-28:34:1:1:0:50 1/1:44:41:22:19:43:95.35%:99:1.4915E-22:34:2:1:1:43 1/1:51:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:16:20:38:94.74%:99:1.1316E-19:31:2:1:1:38 1/1:40:38:17:21:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:21:15:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:18:10:8:19:94.74%:92:5.6585E-10:60:1:0:1:19 1/1:49:29:19:10:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:37:16:21:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:51:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:63:33:30:67:94.03%:99:6.4849E-34:33:4:1:3:67 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:55:25:30:58:94.83%:99:5.8604E-30:34:3:2:1:58 1/1:45:30:14:16:31:96.77%:99:6.8754E-17:26:1:1:0:31 1/1:39:25:11:14:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:24:6:18:23:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:14:10:26:92.31%:99:7.6222E-13:33:2:2:0:26 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:15:16:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:15:14:29:96.67%:99:2.6212E-16:33:1:0:1:31 1/1:44:27:11:16:29:93.1%:99:1.5465E-14:33:2:2:0:29 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:17:13:32:93.75%:99:3.0612E-16:47:2:1:1:32 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:34:15:19:33:97.14%:99:3.2089E-19:61:1:1:0:35 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:52:26:26:53:96.3%:99:6.1952E-29:37:2:2:0:55 1/1:37:30:12:18:31:96.77%:99:6.8754E-17:32:1:1:0:31 1/1:41:43:24:19:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:24:11:13:25:96%:99:2.0568E-13:35:1:1:0:25 1/1:42:46:26:20:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:54:29:25:56:94.74%:99:2.2097E-29:34:3:3:0:57 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:57:30:27:57:98.28%:99:9.6072E-33:31:1:0:1:58 1/1:42:40:19:21:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 0/1:40:26:12:14:30:86.67%:99:3.9214E-13:33:4:3:1:30 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:35:12:23:37:94.59%:99:4.2437E-19:32:2:2:0:37 1/1:38:48:20:28:49:94.12%:99:6.2071E-26:33:3:2:1:51 1/1:41:31:12:19:33:93.94%:99:8.2416E-17:34:2:1:1:33 1/1:39:43:20:23:41:95.56%:99:1.0412E-23:34:2:1:1:45 1/1:39:35:15:20:36:97.22%:99:8.3613E-20:32:1:1:0:36 1/1:40:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:34:11:23:33:97.14%:99:3.2089E-19:31:1:0:1:35 1/1:40:44:21:23:45:97.78%:99:4.4304E-25:33:1:0:1:45 0/1:44:42:18:24:46:89.36%:99:5.6062E-22:46:4:1:3:46 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:40:20:20:42:95.24%:99:5.6346E-22:33:2:0:2:42 1/1:42:30:15:15:32:93.75%:99:3.0612E-16:35:2:2:0:32 1/1:39:24:14:10:23:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:14:15:30:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:42:33:17:16:34:94.29%:99:1.2301E-18:34:1:0:1:34 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:31:12:19:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:17:19:37:97.3%:99:2.1762E-20:32:1:1:0:37 1/1:42:53:21:32:55:96.36%:99:1.6199E-29:35:2:2:0:55 1/1:38:31:14:17:30:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 2531964 . CCTCATCGCTTCGCTCTGCATCGTCACCGGCGCGACTCATCTGCGCCGCTCCTG C . PASS AC=4;AF=0.013;AN=298;ANN=C|intergenic_region|MODIFIER|Rv2258c_Rv2258c-mscR_Rv2259|gene2304-gene2305|intergenic_region|gene2304-gene2305|||n.2531965_2532017delCTCATCGCTTCGCTCTGCATCGTCACCGGCGCGACTCATCTGCGCCGCTCCTG||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:28 0/0:0:0:0:0:15:0%:29:1E0:48:15:9:6:15 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:28 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:24 0/0:0:0:0:0:20:0%:36:1E0:51:20:10:10:22 0/0:37:1:1:0:21:4.76%:31:5E-1:41:20:15:5:24 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:29 0/0:0:0:0:0:10:0%:17:1E0:43:10:6:4:11 0/0:33:1:1:0:18:5.56%:24:5E-1:48:17:8:9:19 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:37:1:1:0:33:3.03%:52:5E-1:44:32:20:12:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:10:3:7:29:32.26%:33:4.1251E-4:46:21:10:11:32 0/0:0:0:0:0:14:0%:25:1E0:44:14:4:10:14 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:31 0/0:37:1:1:0:20:5%:27:5E-1:44:19:12:7:21 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:25 0/0:39:1:1:0:28:3.57%:41:5E-1:47:27:15:12:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:16 0/0:37:3:3:0:14:21.43%:9:1.1111E-1:41:11:6:5:14 0/0:31:1:1:0:16:6.25%:21:5E-1:38:15:8:7:17 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:37:1:1:0:25:4%:38:5E-1:43:24:11:13:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:29 0/0:33:1:1:0:23:4.35%:34:5E-1:43:22:10:12:26 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:23 0/0:0:0:0:0:17:0%:33:1E0:43:17:11:6:19 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:26 0/0:33:1:1:0:31:3.23%:48:5E-1:46:30:20:10:35 0/0:37:2:1:1:29:6.9%:37:2.4561E-1:41:27:21:6:31 0/0:0:0:0:0:47:0%:89:1E0:46:47:23:24:49 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:40 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:38:1:0:1:24:4.17%:34:5E-1:42:23:11:12:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:25 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:38:1:1:0:15:6.67%:21:5E-1:49:14:9:5:17 0/0:37:1:1:0:40:2.5%:62:5E-1:42:39:25:14:43 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:39:1:0:1:30:3.33%:44:5E-1:45:29:13:16:31 0/0:0:0:0:0:15:0%:29:1E0:40:15:7:8:15 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:19 0/0:0:0:0:0:23:0%:44:1E0:40:23:18:5:24 0/0:39:1:0:1:29:3.45%:45:5E-1:41:28:21:7:30 0/0:38:2:2:0:37:5.41%:50:2.4658E-1:43:35:19:16:38 0/0:37:1:0:1:25:4%:38:5E-1:42:24:13:11:27 0/0:33:1:1:0:13:7.69%:18:5E-1:43:12:9:3:13 0/0:37:1:0:1:28:3.57%:41:5E-1:44:27:16:11:29 0/0:39:1:0:1:33:3.03%:52:5E-1:49:32:13:19:35 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:39 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:38 0/0:36:2:2:0:17:11.76%:18:2.4242E-1:42:15:10:5:17 0/0:0:0:0:0:28:0%:51:1E0:48:28:18:10:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:28:15:44 0/0:37:1:1:0:21:4.76%:31:5E-1:43:20:14:6:22 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:7:0%:14:1E0:48:7:5:2:7 0/0:0:0:0:0:11:0%:22:1E0:44:11:9:2:12 0/0:0:0:0:0:22:0%:40:1E0:41:22:16:6:22 0/0:0:0:0:0:9:0%:18:1E0:48:9:8:1:9 0/0:0:0:0:0:12:0%:21:1E0:47:12:6:6:12 0/1:28:23:9:14:35:53.49%:86:2.0322E-9:62:20:14:6:44 0/0:37:1:1:0:38:2.63%:58:5E-1:43:37:22:15:41 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:25 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:17:6:23 0/0:48:2:1:1:26:7.69%:30:2.451E-1:41:24:14:10:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:20 0/0:39:1:0:1:24:4.17%:34:5E-1:41:23:14:9:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:24:7:32 0/0:37:1:0:1:27:3.7%:41:5E-1:39:26:18:8:27 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:37:1:1:0:28:3.57%:41:5E-1:41:27:17:10:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:28 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:21 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:28 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:17:7:24 0/0:0:0:0:0:14:0%:25:1E0:47:14:9:5:14 0/0:0:0:0:0:41:0%:78:1E0:41:41:27:14:42 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:43 0/0:37:3:2:1:26:11.54%:25:1.1765E-1:45:23:11:12:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:27 0/0:0:0:0:0:14:0%:25:1E0:44:14:7:7:14 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:37:1:1:0:24:4.17%:34:5E-1:41:23:13:10:25 0/0:39:1:1:0:27:3.7%:41:5E-1:44:26:13:13:27 0/0:0:0:0:0:14:0%:25:1E0:42:14:9:5:16 0/0:0:0:0:0:21:0%:40:1E0:42:21:18:3:21 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:23 0/0:37:1:0:1:35:2.86%:55:5E-1:43:34:23:11:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:29 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:17 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:27 0/0:37:1:1:0:26:3.85%:38:5E-1:41:25:16:9:28 0/0:0:0:0:0:30:0%:55:1E0:37:30:18:12:30 0/0:37:3:0:3:34:8.82%:37:1.194E-1:39:31:16:15:37 0/0:39:1:1:0:33:3.03%:52:5E-1:39:32:18:14:37 0/0:33:1:1:0:37:2.7%:59:5E-1:43:36:22:14:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:37:1:1:0:41:2.44%:66:5E-1:42:40:26:14:44 0/1:37:31:14:17:57:51.67%:99:2.3224E-12:41:29:16:13:61 0/0:39:1:0:1:23:4.35%:34:5E-1:45:22:9:13:24 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:36:3:0:3:50:6%:62:1.2121E-1:38:47:27:20:52 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:38 0/0:37:1:1:0:37:2.7%:59:5E-1:41:36:20:16:38 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:32 0/0:36:2:2:0:42:4.76%:57:2.4699E-1:39:40:16:24:44 0/0:0:0:0:0:32:0%:59:1E0:38:32:22:10:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:35 0/0:37:1:0:1:43:2.33%:70:5E-1:40:42:23:19:44 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:37 0/0:30:2:2:0:34:5.88%:43:2.4627E-1:39:32:17:15:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:38 0/1:28:10:1:9:32:28.57%:33:4.51E-4:46:24:15:9:37 0/0:60:1:0:1:43:2.33%:66:5E-1:39:41:25:16:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:34 0/0:0:0:0:0:39:0%:74:1E0:39:39:25:14:39 0/0:33:1:1:0:25:4%:38:5E-1:42:24:18:6:28 0/0:39:1:1:0:21:4.76%:31:5E-1:46:20:11:9:21 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:36 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:24 0/0:37:1:0:1:22:4.55%:31:5E-1:50:21:11:10:24 0/0:35:1:1:0:44:2.27%:69:5E-1:43:43:28:15:47 0/0:39:1:1:0:41:2.44%:66:5E-1:43:40:24:16:43 0/0:38:2:0:2:25:8%:31:2.449E-1:42:23:11:12:25 MTB_anc 2532017 . G C . PASS AC=61;AF=0.209;AN=292;ANN=C|intergenic_region|MODIFIER|Rv2258c_Rv2258c-mscR_Rv2259|gene2304-gene2305|intergenic_region|gene2304-gene2305|||n.2532017G>C||||||;HOM=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:44:6:3:3:24:25%:11:1.0968E-2:39:18:13:5:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:4:2:2:21:19.05%:15:5.3471E-2:43:17:7:10:26 0/0:31:2:0:2:17:11.76%:18:2.4242E-1:43:15:8:7:21 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:43:15:7:8:21 0/1:40:9:5:4:27:33.33%:30:8.8132E-4:40:18:15:3:29 0/1:39:8:4:4:22:36.36%:27:1.8042E-3:44:14:5:9:26 0/0:39:3:3:0:10:30%:4:1.0526E-1:42:7:3:4:11 0/0:41:4:2:2:16:25%:8:5.0612E-2:39:12:6:6:20 0/0:36:6:5:1:26:23.08%:13:1.1309E-2:39:20:11:9:27 0/0:45:6:5:1:23:26.09%:11:1.0777E-2:38:17:11:6:25 0/1:38:8:5:3:30:26.67%:26:2.2875E-3:42:22:10:12:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:24:0%:25:1E0:38:14:6:8:26 0/0:44:4:4:0:13:30.77%:6:4.7826E-2:41:9:2:7:14 0/0:37:4:4:0:29:13.79%:26:5.5981E-2:43:25:12:13:30 0/1:39:10:6:4:22:45.45%:35:2.6061E-4:39:12:9:3:24 0/0:39:1:1:0:16:6.25%:21:5E-1:39:15:9:6:17 0/0:35:3:1:2:22:13.64%:19:1.1628E-1:39:19:12:7:28 0/0:36:5:3:2:16:31.25%:6:2.1691E-2:41:11:5:6:18 0/0:35:3:1:2:16:18.75%:11:1.129E-1:45:13:7:6:20 0/1:41:12:8:4:37:32.43%:40:8.4418E-5:40:25:14:11:44 0/1:38:7:3:4:21:33.33%:23:4.3101E-3:44:14:10:4:23 0/1:36:10:4:6:26:38.46%:34:3.3576E-4:45:16:9:7:32 0/0:37:6:3:3:27:22.22%:16:1.1461E-2:41:21:9:12:29 0/0:43:4:0:4:11:36.36%:4:4.5113E-2:44:7:4:3:11 0/0:36:4:3:1:13:30.77%:6:4.7826E-2:40:9:4:5:13 0/1:35:6:4:2:18:33.33%:20:9.5308E-3:38:12:6:6:20 0/0:38:5:4:1:20:25%:10:2.3562E-2:38:15:9:6:20 0/0:46:3:2:1:17:17.65%:14:1.1364E-1:40:14:7:7:17 0/1:35:10:5:5:31:32.26%:33:4.1251E-4:39:21:13:8:35 0/0:33:4:1:3:20:20%:13:5.3015E-2:39:16:7:9:23 0/1:38:8:2:6:23:34.78%:27:1.8791E-3:39:15:9:6:26 0/0:38:3:2:1:17:17.65%:14:1.1364E-1:40:14:9:5:17 0/0:36:5:3:2:20:25%:10:2.3562E-2:40:15:10:5:24 0/1:39:7:4:3:30:23.33%:22:5.1909E-3:40:22:13:9:33 0/1:37:7:4:3:24:29.17%:23:4.7006E-3:37:17:14:3:27 0/1:38:12:3:9:48:25%:39:1.1153E-4:42:36:15:21:55 0/1:40:9:4:5:31:29.03%:30:9.9376E-4:41:22:10:12:35 0/1:37:13:7:6:38:34.21%:44:3.5456E-5:39:25:17:8:41 0/0:37:5:1:4:21:23.81%:12:2.3921E-2:38:16:11:5:23 0/1:38:10:5:5:36:27.78%:33:4.7404E-4:40:26:12:14:40 0/1:40:8:5:3:21:38.1%:27:1.7241E-3:39:13:6:7:21 0/0:38:3:1:2:15:20%:11:1.1207E-1:38:12:5:7:17 0/0:38:3:3:0:16:18.75%:11:1.129E-1:42:13:7:6:18 0/0:0:0:0:0:12:0%:21:1E0:39:12:9:3:15 0/1:40:6:3:3:17:35.29%:20:9.2021E-3:45:11:8:3:19 0/1:38:7:3:4:34:20.59%:22:5.5492E-3:39:27:16:11:38 0/0:37:6:2:4:24:25%:11:1.0968E-2:39:18:9:9:25 0/0:43:6:2:4:28:21.43%:16:1.1603E-2:40:22:9:13:32 0/0:36:3:1:2:15:20%:11:1.1207E-1:38:12:6:6:17 0/1:38:7:2:5:30:23.33%:22:5.2713E-3:37:23:16:7:30 0/0:37:5:3:2:19:26.32%:10:2.3166E-2:37:14:10:4:20 0/0:42:5:3:2:22:22.73%:12:2.4248E-2:39:17:13:4:26 0/1:37:11:7:4:25:44%:39:1.1047E-4:39:13:9:4:29 0/1:37:8:4:4:27:29.63%:26:2.1337E-3:43:19:11:8:33 0/0:39:4:3:1:19:21.05%:13:5.251E-2:38:15:7:8:21 0/0:49:4:2:2:13:30.77%:6:4.7826E-2:35:9:6:3:17 0/0:30:4:1:3:24:16.67%:18:5.461E-2:40:20:10:10:30 0/1:36:7:2:5:30:23.33%:22:5.2713E-3:46:23:9:14:34 0/0:43:4:1:3:27:14.81%:23:5.5494E-2:46:23:11:12:30 0/1:36:9:0:9:35:25.71%:29:1.0857E-3:38:26:15:11:39 0/1:37:9:5:4:37:24.32%:29:1.1256E-3:39:28:14:14:40 0/0:37:5:4:1:16:31.25%:6:2.1691E-2:39:11:8:3:17 0/0:37:5:4:1:27:18.52%:19:2.5527E-2:43:22:15:7:28 0/1:39:10:4:6:37:27.03%:33:4.8486E-4:41:27:15:12:41 0/0:37:2:1:1:20:10%:21:2.4359E-1:40:18:13:5:23 0/0:36:6:2:4:33:18.18%:23:1.219E-2:39:27:19:8:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:45:3:1:2:11:27.27%:7:1.0714E-1:42:8:7:1:11 0/1:40:8:3:5:19:42.11%:28:1.5455E-3:38:11:7:4:22 0/0:35:4:1:3:11:36.36%:4:4.5113E-2:41:7:6:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:1:1:0:38:6.67%:17:5E-1:42:13:9:4:40 0/0:35:5:1:4:31:16.13%:24:2.6257E-2:39:26:13:13:33 0/0:34:1:1:0:20:5%:27:5E-1:42:19:12:7:22 0/0:36:4:2:2:18:22.22%:10:5.1948E-2:44:14:7:7:19 0/1:46:8:3:5:21:38.1%:27:1.7241E-3:38:13:10:3:23 0/0:39:4:3:1:18:22.22%:10:5.1948E-2:40:14:7:7:19 0/1:38:6:3:3:17:35.29%:20:9.2021E-3:37:11:7:4:17 0/0:37:6:4:2:22:27.27%:9:1.057E-2:39:16:10:6:25 0/1:38:7:4:3:28:25%:22:5.1054E-3:42:21:16:5:32 0/0:36:4:3:1:21:20%:13:5.3015E-2:40:16:10:6:23 0/1:37:7:4:3:30:23.33%:22:5.2713E-3:43:23:13:10:32 0/0:35:4:1:3:22:18.18%:15:5.3885E-2:39:18:12:6:24 0/0:37:6:2:4:26:23.08%:13:1.1309E-2:39:20:14:6:27 0/0:38:4:0:4:18:22.22%:10:5.1948E-2:36:14:10:4:20 0/0:35:3:0:3:17:17.65%:14:1.1364E-1:35:14:8:6:21 0/0:41:5:2:3:25:20%:17:2.5076E-2:41:20:14:6:30 0/1:38:8:1:7:20:40%:27:1.638E-3:39:12:6:6:24 0/1:37:11:4:7:28:39.29%:38:1.4422E-4:42:17:12:5:33 0/0:48:2:1:1:13:15.38%:13:2.4E-1:40:11:7:4:14 0/1:38:8:4:4:40:20%:25:2.653E-3:38:32:19:13:47 0/0:52:3:1:2:23:13.04%:22:1.1667E-1:42:20:12:8:26 0/1:35:16:6:10:44:36.36%:55:2.7433E-6:39:27:14:13:48 0/1:37:11:7:4:26:42.31%:38:1.2791E-4:43:15:4:11:29 0/0:40:5:3:2:25:20%:17:2.5076E-2:39:20:12:8:27 0/0:36:5:3:2:25:20%:17:2.5076E-2:45:20:11:9:27 0/1:37:6:4:2:16:37.5%:20:8.837E-3:38:10:5:5:17 0/0:38:3:3:0:27:11.11%:28:1.1792E-1:41:24:16:8:29 0/0:39:3:3:0:19:15.79%:17:1.1486E-1:39:16:10:6:19 0/0:38:3:1:2:23:13.04%:22:1.1667E-1:37:20:12:8:29 0/0:36:6:3:3:22:27.27%:9:1.057E-2:42:16:9:7:24 0/0:45:5:1:4:19:26.32%:10:2.3166E-2:44:14:5:9:21 0/0:35:3:1:2:12:25%:6:1.087E-1:40:9:7:2:15 0/1:41:7:4:3:19:36.84%:23:3.9926E-3:36:12:9:3:29 0/0:38:3:0:3:19:15.79%:17:1.1486E-1:41:16:10:6:22 0/0:38:4:3:1:26:15.38%:20:5.5222E-2:38:22:15:7:29 0/0:37:4:2:2:25:16%:21:5.4928E-2:39:21:12:9:26 0/0:39:3:1:2:15:20%:11:1.1207E-1:39:12:4:8:15 0/0:36:5:3:2:26:19.23%:17:2.531E-2:40:21:10:11:31 0/0:43:3:1:2:14:21.43%:9:1.1111E-1:43:11:6:5:15 0/0:36:5:4:1:14:35.71%:4:2.037E-2:42:9:3:6:19 0/0:38:5:2:3:24:20.83%:14:2.4823E-2:37:19:11:8:26 0/1:38:7:2:5:19:36.84%:23:3.9926E-3:36:12:7:5:26 0/1:37:13:8:5:28:46.43%:47:1.9812E-5:41:15:7:8:31 0/0:37:6:4:2:29:20.69%:18:1.1736E-2:38:23:14:9:33 0/1:37:9:6:3:33:27.27%:29:1.042E-3:41:24:15:9:35 0/1:34:9:4:5:25:36%:30:8.1542E-4:39:16:10:6:31 0/1:35:10:6:4:36:27.78%:33:4.7404E-4:40:26:16:10:45 0/0:38:1:1:0:53:4.17%:34:5E-1:38:23:15:8:55 0/0:38:6:2:4:21:28.57%:9:1.0344E-2:40:15:4:11:22 0/1:38:7:4:3:22:31.82%:23:4.4505E-3:38:15:6:9:27 0/1:37:10:6:4:37:27.03%:33:4.8486E-4:36:27:14:13:43 0/1:35:8:2:6:29:27.59%:26:2.2392E-3:42:21:11:10:39 0/0:37:6:5:1:33:18.75%:20:1.2087E-2:37:26:14:12:36 0/1:36:11:6:5:26:42.31%:38:1.2791E-4:38:15:5:10:28 0/1:37:7:6:1:35:20%:22:5.6095E-3:39:28:10:18:41 0/1:36:8:4:4:30:26.67%:26:2.2875E-3:38:22:15:7:32 0/0:38:5:4:1:24:20.83%:14:2.4823E-2:40:19:6:13:28 0/0:34:4:2:2:20:20%:13:5.3015E-2:37:16:6:10:24 0/0:36:5:4:1:30:16.67%:21:2.6093E-2:39:25:12:13:33 0/1:37:7:5:2:33:21.21%:22:5.4855E-3:39:26:9:17:35 0/1:36:9:3:6:29:31.03%:30:9.4048E-4:38:20:11:9:32 0/1:36:10:7:3:33:30.3%:33:4.3872E-4:36:23:12:11:39 0/0:37:1:0:1:28:5.26%:28:5E-1:38:18:11:7:30 0/1:38:9:7:2:40:22.5%:29:1.1791E-3:37:31:21:10:41 0/0:39:5:1:4:25:20%:17:2.5076E-2:40:20:11:9:29 0/1:35:7:4:3:29:24.14%:22:5.1909E-3:40:22:13:9:36 0/1:37:12:6:6:42:28.57%:40:9.7866E-5:38:30:20:10:44 0/0:37:5:0:5:24:20.83%:14:2.4823E-2:41:19:14:5:28 0/0:37:4:3:1:19:21.05%:13:5.251E-2:41:15:7:8:19 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:19 0/1:41:7:2:5:25:28%:23:4.8126E-3:38:18:9:9:28 0/1:36:7:5:2:28:25%:22:5.1054E-3:37:21:11:10:33 0/1:35:6:4:2:18:33.33%:20:9.5308E-3:38:12:7:5:21 0/0:43:4:2:2:21:20%:13:5.3015E-2:48:16:9:7:23 0/1:39:13:6:7:48:27.08%:43:4.7798E-5:40:35:23:12:54 0/1:41:12:7:5:36:33.33%:40:8.1472E-5:40:24:15:9:40 0/1:40:7:6:1:25:28%:23:4.8126E-3:41:18:7:11:26 MTB_anc 2533118 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|mscR_Rv2259|gene2305|transcript|Transcript_gene2305|Coding|1/1|c.874G>A|p.Val292Ile|874/1086|874/1086|292/361||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2533118G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2533118G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:52:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:17:14:32:96.88%:99:1.8007E-17:60:1:0:1:33 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:48:26:12:14:27:96.3%:99:1.4382E-14:60:1:0:1:28 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:29:15:14:30:96.67%:99:2.6212E-16:60:1:1:0:32 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:52:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:50:17:9:8:18:94.44%:86:2.0936E-9:37:1:1:0:19 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:43:20:23:44:97.73%:99:1.7144E-24:30:1:1:0:46 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:53 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 2534561 . CGG C . PASS AC=294;AF=0.980;AN=300;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2534562_2534563delGG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2534562_2534563delGG||||||,C|intragenic_variant|MODIFIER|Rv2261c_Rv2261c|gene2307|gene_variant|gene2307|||n.2534562_2534563delGG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:48:24:24:50:96%:99:1.3143E-26:32:2:0:2:50 1/1:52:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:51:26:25:52:98.08%:99:3.3479E-29:34:1:1:0:52 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:19:10:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:46:20:26:47:97.87%:99:2.9526E-26:33:1:0:1:47 1/1:49:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:46:27:19:47:97.87%:99:2.9526E-26:60:1:1:0:47 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:18:11:30:96.67%:99:2.6212E-16:24:1:1:0:30 1/1:42:23:11:12:22:95.83%:99:7.7525E-13:60:1:1:0:24 1/1:37:23:12:11:24:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:23:8:15:25:92%:99:2.7767E-12:34:2:0:2:25 1/1:42:33:19:14:34:94.29%:99:5.9366E-18:29:2:1:1:35 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:11:22:34:94.29%:99:5.9366E-18:48:2:1:1:35 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:22:9:13:23:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:7:13:21:95.24%:99:4.0873E-11:30:1:0:1:21 1/1:46:41:23:18:43:95.35%:99:1.4915E-22:35:2:1:1:43 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:14:12:28:92.86%:99:5.6872E-14:32:2:1:1:28 1/1:40:32:20:12:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:29:11:18:31:93.55%:99:1.1344E-15:46:2:1:1:31 0/1:43:22:8:14:26:84.62%:99:5.5261E-11:37:4:2:2:26 1/1:47:30:12:18:30:96.77%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:15:12:26:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:40:37:21:16:37:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:46:53:25:28:56:94.64%:99:8.323E-29:34:3:1:2:56 1/1:42:22:6:16:24:91.67%:99:1.0078E-11:28:2:1:1:24 1/1:44:34:17:17:34:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:42:34:15:19:36:94.44%:99:1.5887E-18:32:2:0:2:36 1/1:41:36:19:17:37:97.3%:99:2.1762E-20:33:1:1:0:37 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:38:16:22:38:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:41:32:14:18:33:94.12%:99:2.2142E-17:47:2:1:1:34 1/1:42:36:14:22:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:15:9:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:44:40:18:22:43:93.02%:99:2.287E-21:34:3:1:2:43 1/1:41:51:24:27:52:98.08%:99:3.3479E-29:35:1:0:1:52 1/1:45:41:21:20:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:18:14:4:19:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:9:18:27:96.43%:99:3.7915E-15:35:1:0:1:28 1/1:42:42:15:27:41:97.67%:99:6.6289E-24:36:1:0:1:43 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:32:16:16:33:96.97%:99:4.7095E-18:60:1:1:0:33 1/1:44:25:14:11:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:15:14:29:96.67%:99:2.6212E-16:35:1:0:1:30 1/1:48:21:9:12:22:95.45%:99:1.0931E-11:33:1:0:1:22 1/1:43:41:24:17:42:97.62%:99:2.5612E-23:60:1:1:0:42 1/1:47:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:24:6:18:24:96%:99:2.0568E-13:32:1:1:0:25 0/1:44:35:14:21:37:89.74%:99:4.2437E-19:35:2:0:2:37 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:20:10:10:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:31:19:12:34:91.18%:99:2.7308E-16:44:3:1:2:34 1/1:50:21:10:11:21:95.45%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:11:21:33:94.12%:99:2.2142E-17:48:2:1:1:34 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:31:15:16:32:96.88%:99:1.8007E-17:37:1:1:0:32 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:38:19:19:38:97.44%:99:1.4697E-21:60:1:0:1:39 1/1:43:45:22:23:46:97.83%:99:1.1441E-25:38:1:1:0:46 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:11:15:26:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:43:26:13:13:27:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:43:12:7:5:12:92.31%:58:1.3461E-6:34:1:0:1:13 1/1:47:33:15:18:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:36:20:16:37:97.3%:99:2.1762E-20:33:1:1:0:37 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:46:26:20:48:95.83%:99:1.9036E-25:33:2:1:1:48 1/1:39:34:17:17:34:97.14%:99:3.2089E-19:33:1:0:1:35 1/1:44:40:19:21:42:95.24%:99:5.6346E-22:33:2:2:0:42 0/1:45:24:9:15:27:85.71%:99:4.7015E-12:34:4:2:2:28 1/1:41:23:15:8:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:17:18:37:94.59%:99:4.2437E-19:47:2:1:1:37 1/1:42:31:15:16:32:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:39:25:14:11:27:92.59%:99:2.0853E-13:35:2:1:1:27 1/1:41:26:12:14:27:96.3%:99:1.4382E-14:33:1:1:0:27 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:15:18:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:18:9:9:18:94.74%:92:5.6585E-10:32:1:1:0:19 0/1:44:16:10:6:18:88.89%:76:2.0936E-8:31:2:1:1:18 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:11:17:30:90.32%:99:1.2857E-14:42:3:2:1:31 1/1:44:40:17:23:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:38:24:14:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:18:14:32:94.12%:99:4.7095E-18:37:1:1:0:33 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:22:10:12:23:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:23:9:14:25:92%:99:2.7767E-12:33:2:1:1:26 1/1:38:44:23:21:44:97.78%:99:4.4304E-25:30:1:1:0:45 1/1:38:28:13:15:30:90.32%:99:1.2857E-14:34:3:1:2:31 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:26:12:14:28:92.86%:99:5.6872E-14:32:2:1:1:28 1/1:42:59:27:32:58:98.33%:99:6.3137E-34:35:1:0:1:60 1/1:40:55:20:35:54:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:27:15:12:28:93.1%:99:1.5465E-14:34:2:1:1:29 1/1:41:38:20:18:40:95%:99:8.0088E-21:32:2:1:1:40 0/1:41:22:12:10:24:88%:99:2.5916E-11:33:3:1:2:25 1/1:38:51:27:24:53:92.73%:99:4.6193E-27:34:4:1:3:55 1/1:37:37:18:19:34:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:45:15:30:46:95.74%:99:7.2338E-25:33:2:0:2:47 0/1:37:26:15:11:29:89.66%:99:1.6496E-13:33:3:0:3:29 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:15:15:31:93.75%:99:3.0612E-16:30:2:1:1:32 1/1:40:34:14:20:36:94.44%:99:1.5887E-18:33:2:0:2:36 1/1:35:25:14:11:25:92.59%:99:2.0853E-13:33:2:0:2:28 1/1:40:38:19:19:39:97.44%:99:1.4697E-21:29:1:0:1:40 1/1:40:28:9:19:29:93.33%:99:4.194E-15:32:2:1:1:30 1/1:45:24:9:15:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:38:41:22:19:40:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:45:30:17:13:32:93.75%:99:3.0612E-16:60:2:2:0:32 1/1:42:37:15:22:38:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:41:37:15:22:36:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:41:29:15:14:31:93.55%:99:1.1344E-15:32:2:1:1:31 1/1:42:30:12:18:31:96.77%:99:6.8754E-17:32:1:0:1:31 1/1:38:29:12:17:29:96.67%:99:2.6212E-16:34:1:1:0:30 1/1:47:32:14:18:33:96.97%:99:4.7095E-18:30:1:1:0:33 1/1:42:46:21:25:47:97.87%:99:2.9526E-26:33:1:0:1:47 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:26:9:17:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:52:21:31:53:96.3%:99:6.1952E-29:47:2:1:1:54 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 2537043 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|synonymous_variant|LOW|Rv2264c_Rv2264c|gene2309|transcript|Transcript_gene2309|Coding|1/1|c.1308G>C|p.Thr436Thr|1308/1779|1308/1779|436/592||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2537043C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2537043C>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:39:39:25:14:39 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:10 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:43 0/0:0:0:0:0:16:0%:29:1E0:42:16:10:6:16 0/0:0:0:0:0:33:0%:63:1E0:39:33:11:22:33 0/0:0:0:0:0:15:0%:29:1E0:40:15:10:5:15 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:26 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:18 0/0:0:0:0:0:24:0%:44:1E0:38:24:8:16:24 0/0:37:1:0:1:16:6.25%:21:5E-1:41:15:6:9:16 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:28 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:8 0/0:0:0:0:0:35:0%:67:1E0:38:35:14:21:36 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:20 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:37 0/0:0:0:0:0:18:0%:32:1E0:39:18:15:3:18 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:18 0/0:0:0:0:0:19:0%:37:1E0:40:19:5:14:19 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:19 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:38 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:23 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:19 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:21 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:35 0/0:0:0:0:0:24:0%:44:1E0:39:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:33 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:37:26:11:15:26 0/0:0:0:0:0:21:0%:40:1E0:42:21:6:15:21 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:32 0/0:39:1:1:0:25:4%:38:5E-1:40:24:13:11:25 0/0:0:0:0:0:26:0%:47:1E0:37:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:33 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:29 0/0:0:0:0:0:10:0%:17:1E0:40:10:7:3:10 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:22 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:0:0:0:0:35:0%:67:1E0:37:35:13:22:36 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:43 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:22 0/0:0:0:0:0:34:0%:62:1E0:38:34:9:25:34 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:17 0/0:38:1:0:1:10:10%:11:5E-1:44:9:2:7:11 0/0:0:0:0:0:12:0%:21:1E0:41:12:3:9:12 0/0:0:0:0:0:14:0%:25:1E0:47:14:8:6:14 0/0:0:0:0:0:20:0%:36:1E0:39:20:6:14:20 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:35 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:32 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:16 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:31 0/0:0:0:0:0:17:0%:33:1E0:44:17:6:11:19 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:12 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:9:0%:18:1E0:46:9:4:5:10 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:37 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:36:33:15:18:33 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:18 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:31 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:20 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:39 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:5:21:27 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:21 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:26 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:20 0/0:0:0:0:0:36:0%:66:1E0:37:36:15:21:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:17 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 0/0:0:0:0:0:19:0%:37:1E0:40:19:5:14:19 0/0:0:0:0:0:18:0%:32:1E0:37:18:5:13:18 0/0:0:0:0:0:26:0%:47:1E0:36:26:10:16:26 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:33 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:26 0/0:38:1:1:0:30:3.33%:44:5E-1:38:29:9:20:30 0/1:41:6:4:2:19:31.58%:20:9.828E-3:41:13:6:7:19 0/1:37:7:2:5:29:24.14%:22:5.1909E-3:42:22:12:10:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:28 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:11 0/0:0:0:0:0:37:0%:70:1E0:36:37:18:19:38 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:12 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:26 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:18 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:14 0/0:0:0:0:0:23:0%:44:1E0:35:23:12:11:23 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:25 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:24 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:16 0/0:0:0:0:0:13:0%:25:1E0:39:13:8:5:15 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:22 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 0/0:0:0:0:0:31:0%:59:1E0:36:31:13:18:33 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:23 0/0:0:0:0:0:26:0%:47:1E0:36:26:10:16:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:6:23:30 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:21 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:24 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:28 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:35 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:29 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:29 MTB_anc 2537596 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv2264c_Rv2264c|gene2309|transcript|Transcript_gene2309|Coding|1/1|c.755C>T|p.Ser252Leu|755/1779|755/1779|252/592||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2537596G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2537596G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:17:0%:33:1E0:49:17:10:7:17 0/0:0:0:0:0:46:0%:85:1E0:47:46:22:24:46 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:26 0/0:0:0:0:0:32:0%:59:1E0:50:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:50:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:50:24:14:10:24 0/0:37:1:1:0:36:2.78%:55:5E-1:49:35:25:10:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:40 0/0:0:0:0:0:18:0%:32:1E0:49:18:8:10:18 0/0:39:1:1:0:47:2.13%:77:5E-1:49:46:22:24:47 0/0:0:0:0:0:15:0%:29:1E0:45:15:10:5:15 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:23 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:49 0/0:0:0:0:0:20:0%:36:1E0:50:20:8:12:20 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:18 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:38 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:51:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:30 0/0:0:0:0:0:18:0%:32:1E0:46:18:6:12:18 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:57:0%:99:1E0:48:57:28:29:57 0/0:0:0:0:0:45:0%:85:1E0:47:45:22:23:45 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:17:0%:33:1E0:48:17:11:6:18 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:40:0%:74:1E0:47:40:26:14:41 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:38:0%:70:1E0:49:38:16:22:38 0/0:0:0:0:0:15:0%:29:1E0:54:15:7:8:15 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:49 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:35:0%:67:1E0:47:35:12:23:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:55:0%:99:1E0:44:55:30:25:56 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:47:0%:89:1E0:47:47:19:28:48 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:28 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:70:0%:99:1E0:47:70:38:32:71 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:52:27:15:12:27 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:38 0/0:0:0:0:0:22:0%:40:1E0:41:22:16:6:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:11:22:34 0/0:0:0:0:0:25:0%:48:1E0:48:25:9:16:25 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:31 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:52 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:50:29:18:11:29 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:19 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:26 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:34:0%:62:1E0:49:34:23:11:34 0/0:0:0:0:0:18:0%:32:1E0:50:18:7:11:18 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:45 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:47 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:17:0%:33:1E0:48:17:5:12:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:5:19:24 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:41:0%:78:1E0:45:41:27:14:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:22 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:31 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:38 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:46 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:34 0/0:0:0:0:0:52:0%:96:1E0:41:52:33:19:54 0/0:0:0:0:0:58:0%:99:1E0:44:58:32:26:58 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:66:0%:99:1E0:41:66:29:37:67 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:53:0%:99:1E0:43:53:15:38:54 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:48 0/0:0:0:0:0:52:0%:96:1E0:42:52:25:27:53 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:39 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:41 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:35 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:49 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:24:16:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:37:1:1:0:64:1.56%:99:5E-1:39:63:28:35:64 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:45 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:40 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:39 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:37 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:62:0%:99:1E0:41:62:34:28:62 0/0:0:0:0:0:43:0%:82:1E0:42:43:15:28:43 MTB_anc 2538918 . C CT . PASS AC=4;AF=0.013;AN=300;ANN=CT|frameshift_variant|HIGH|Rv2265_Rv2265|gene2310|transcript|Transcript_gene2310|Coding|1/1|c.221dupT|p.Leu74fs|222/1230|222/1230|74/409||INFO_REALIGN_3_PRIME,CT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2538918_2538919insT||||||,CT|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2538918_2538919insT||||||;HET=0;LOF=(Rv2265_Rv2265|gene2310|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:16:0%:29:1E0:50:16:7:9:16 0/0:0:0:0:0:44:0%:81:1E0:45:44:19:25:44 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:27 0/0:0:0:0:0:16:0%:29:1E0:40:16:12:4:17 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:15:0%:29:1E0:48:15:8:7:15 0/0:0:0:0:0:59:0%:99:1E0:44:59:28:31:60 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:25 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:45 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:20:0%:36:1E0:52:20:11:9:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:31:0%:59:1E0:46:31:11:20:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:24:7:31 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:42 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:26 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:48 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:57:0%:99:1E0:46:57:35:22:59 0/0:0:0:0:0:48:0%:89:1E0:46:48:18:30:49 0/0:0:0:0:0:44:0%:81:1E0:46:44:18:26:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:37 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:51 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:52 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:48:0%:89:1E0:41:48:18:30:48 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:36 0/0:0:0:0:0:15:0%:29:1E0:44:15:11:4:15 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:46 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:47 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:38 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:42:0%:77:1E0:43:42:14:28:42 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:48 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:34 0/0:0:0:0:0:49:0%:93:1E0:46:49:17:32:49 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:37 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:37:1:0:1:19:5.26%:28:5E-1:47:18:11:7:19 0/0:0:0:0:0:34:0%:62:1E0:45:34:23:11:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:44 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:24 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:45 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:38 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:29 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:44 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:52 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:43 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:38:1:1:0:26:3.85%:38:5E-1:39:25:12:13:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:29:20:50 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:53:0%:99:1E0:39:53:29:24:56 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:32 0/0:0:0:0:0:48:0%:89:1E0:39:48:25:23:52 0/0:0:0:0:0:45:0%:85:1E0:38:45:19:26:47 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:37 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:48 0/0:0:0:0:0:39:0%:74:1E0:38:39:23:16:39 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:43 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:31 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:59:0%:99:1E0:39:59:30:29:61 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:40 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:44 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:43 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:36:0%:66:1E0:41:36:24:12:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:24:15:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:43 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:43 0/0:0:0:0:0:43:0%:82:1E0:39:43:18:25:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:38 MTB_anc 2542965 . TC T . PASS AC=298;AF=0.993;AN=300;ANN=T|frameshift_variant|HIGH|cyp128_Rv2268c|gene2313|transcript|Transcript_gene2313|Coding|1/1|c.1311delG|p.Thr438fs|1311/1470|1311/1470|437/489||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2542966delC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2542966delC||||||;LOF=(cyp128_Rv2268c|gene2313|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:49:24:25:51:96.08%:99:3.4484E-27:33:2:2:0:51 1/1:46:22:13:9:23:91.67%:99:1.0078E-11:46:2:1:1:24 1/1:44:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:31:15:16:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:31:12:19:32:96.88%:99:1.8007E-17:31:1:0:1:32 1/1:51:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:23:13:10:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:34:13:21:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:12:15:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:52:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:44:19:25:46:93.62%:99:1.2056E-23:32:3:2:1:47 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:18:14:33:96.97%:99:4.7095E-18:33:1:1:0:33 1/1:43:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:26:10:16:28:92.86%:99:5.6872E-14:35:2:1:1:28 1/1:40:25:10:15:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:41:61:40:21:59:98.39%:99:4.1425E-35:25:1:1:0:62 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:20:9:11:22:90.91%:98:1.3117E-10:34:2:2:0:22 1/1:43:26:17:9:26:96.3%:99:1.4382E-14:60:1:1:0:27 0/1:45:16:6:10:18:88.89%:76:2.0936E-8:33:2:2:0:18 1/1:44:23:10:13:24:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:36:17:19:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:39:13:26:40:97.5%:99:3.8137E-22:33:1:0:1:40 1/1:40:30:12:18:30:96.77%:99:6.8754E-17:30:1:1:0:31 1/1:44:32:18:14:32:96.97%:99:4.7095E-18:35:1:0:1:33 1/1:41:30:16:14:31:96.77%:99:6.8754E-17:24:1:1:0:31 1/1:46:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:58:27:31:58:98.31%:99:2.4634E-33:32:1:0:1:59 1/1:47:53:27:26:52:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:45:17:28:47:95.74%:99:7.2338E-25:46:2:1:1:47 1/1:43:25:13:12:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:18:14:34:94.12%:99:2.2142E-17:33:2:0:2:34 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:29:11:18:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:42:54:21:33:54:98.18%:99:5.6837E-31:32:1:0:1:55 1/1:44:44:21:23:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:25:13:12:26:96.15%:99:5.4444E-14:34:1:1:0:26 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:40:20:20:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:29:15:14:30:96.67%:99:2.6212E-16:51:1:1:0:30 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:23:8:15:23:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:44:52:27:25:52:98.11%:99:8.609E-30:33:1:0:1:53 1/1:43:36:16:20:38:94.74%:99:1.1316E-19:47:2:1:1:38 1/1:44:23:12:11:24:95.83%:99:7.7525E-13:26:1:1:0:24 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:32:19:13:33:96.97%:99:4.7095E-18:34:1:1:0:33 1/1:51:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:14:23:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:31:16:15:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:43:19:24:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:22:13:9:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:10:4:6:11:90.91%:47:1.7011E-5:34:1:1:0:11 1/1:43:19:10:9:20:95%:98:1.5234E-10:30:1:0:1:20 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:18:9:9:20:90%:87:1.6758E-9:34:2:0:2:20 1/1:48:24:17:7:26:92.31%:99:7.6222E-13:47:2:1:1:26 1/1:43:50:25:25:48:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:28:10:18:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:32:14:18:34:94.12%:99:2.2142E-17:33:2:0:2:34 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:12:13:26:96.15%:99:5.4444E-14:32:1:0:1:26 1/1:42:24:9:15:26:92.31%:99:7.6222E-13:35:2:1:1:26 1/1:45:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 0/1:45:26:12:14:30:86.67%:99:3.9214E-13:35:4:1:3:30 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:13:13:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:16:22:39:95%:99:8.0088E-21:33:2:1:1:40 1/1:42:35:13:22:37:94.59%:99:4.2437E-19:46:2:1:1:37 1/1:43:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:29:17:12:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:42:64:34:30:63:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:28:14:14:29:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:40:41:23:18:39:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:20:14:34:94.44%:99:1.5887E-18:33:2:1:1:36 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:11:12:24:95.83%:99:7.7525E-13:34:1:0:1:24 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:27:10:17:28:96.43%:99:3.7915E-15:32:1:1:0:28 1/1:41:27:11:16:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:12:14:26:92.86%:99:5.6872E-14:35:2:1:1:28 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:12:18:32:93.75%:99:3.0612E-16:46:2:2:0:32 1/1:44:28:17:11:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:15:21:38:94.74%:99:1.1316E-19:34:2:0:2:38 1/1:41:32:15:17:33:96.97%:99:4.7095E-18:33:1:1:0:33 1/1:38:16:7:9:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:31:16:15:28:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:39:22:17:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:18:20:38:97.44%:99:1.4697E-21:35:1:0:1:39 1/1:41:59:31:28:59:98.33%:99:6.3137E-34:33:1:0:1:60 1/1:39:28:11:17:29:96.55%:99:9.9776E-16:32:1:0:1:29 1/1:45:28:11:17:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:65:35:30:64:100%:99:1.0519E-38:0:0:0:0:65 1/1:43:47:20:27:50:94%:99:2.3219E-25:36:3:2:1:50 1/1:42:28:18:10:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:24:8:16:21:100%:99:3.101E-14:0:0:0:0:24 1/1:37:49:24:25:46:96.08%:99:3.4484E-27:34:2:1:1:51 1/1:40:54:26:28:53:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:49:20:29:48:100%:99:3.925E-29:0:0:0:0:49 1/1:37:49:27:22:47:100%:99:3.925E-29:0:0:0:0:49 1/1:42:49:21:28:49:98%:99:5.0549E-28:32:1:1:0:50 1/1:38:46:16:30:44:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:38:22:16:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:53:24:29:52:98.15%:99:2.2126E-30:60:1:1:0:54 1/1:43:37:27:10:35:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:43:18:25:44:97.73%:99:1.7144E-24:37:1:1:0:44 1/1:40:36:19:17:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:18:15:34:97.06%:99:1.2301E-18:33:1:1:0:34 1/1:37:61:25:36:56:100%:99:2.609E-36:0:0:0:0:61 1/1:44:39:17:22:40:97.5%:99:3.8137E-22:32:1:1:0:40 1/1:42:42:23:19:42:97.67%:99:6.6289E-24:33:1:0:1:43 1/1:41:41:19:22:41:97.62%:99:2.5612E-23:33:1:1:0:42 1/1:39:30:15:15:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:12:16:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:35:18:17:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:42:24:18:43:95.45%:99:3.9431E-23:33:2:1:1:44 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:9:13:23:95.65%:99:2.9149E-12:24:1:1:0:23 1/1:46:31:16:15:33:93.94%:99:8.2416E-17:33:2:2:0:34 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:44:22:22:45:97.78%:99:4.4304E-25:35:1:0:1:45 1/1:43:41:19:22:42:97.62%:99:2.5612E-23:37:1:1:0:42 MTB_anc 2549711 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2277c_Rv2277c|gene2323|transcript|Transcript_gene2323|Coding|1/1|c.319T>C|p.Trp107Arg|319/906|319/906|107/301||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2549711A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2549711A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:22:11:11:23:95.65%:99:2.9149E-12:39:1:1:0:23 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:21:10:11:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:24:18:43:97.67%:99:6.6289E-24:39:1:1:0:44 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:22:9:13:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:18:8:10:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:50:29:21:51:98.04%:99:1.3013E-28:37:1:0:1:52 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 2552982 . G GC . PASS AC=299;AF=0.997;AN=300;ANN=GC|intergenic_region|MODIFIER|Rv2280_Rv2280-pitB_Rv2281|gene2324-gene2325|intergenic_region|gene2324-gene2325|||n.2552982_2552983insC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:22:19:42:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:51:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:22:19:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:13:11:25:96%:99:2.0568E-13:30:1:1:0:25 1/1:50:24:10:14:25:96%:99:2.0568E-13:37:1:1:0:25 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:11:13:24:96%:99:2.0568E-13:33:1:1:0:25 1/1:46:28:16:12:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:41:17:24:42:97.62%:99:2.5612E-23:37:1:1:0:42 1/1:54:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:56:26:30:57:96.55%:99:2.8822E-31:48:2:0:2:58 1/1:42:29:14:15:29:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:44:36:17:19:35:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:18:11:7:17:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:46:20:9:11:21:95.24%:99:7.2544E-12:0:0:0:0:22 1/1:49:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:35:21:14:35:97.22%:99:8.3613E-20:39:1:0:1:36 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:26:13:13:27:96.3%:99:1.4382E-14:37:1:0:1:27 1/1:47:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:12:10:22:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:45:21:7:14:23:91.3%:99:3.6437E-11:31:2:1:1:23 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:19:10:9:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:14:10:25:96%:99:2.0568E-13:33:1:1:0:25 1/1:48:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:12:17:31:93.55%:99:1.1344E-15:49:2:1:1:31 1/1:44:33:19:14:33:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:13:14:27:96.43%:99:3.7915E-15:37:1:0:1:28 1/1:48:49:26:23:50:98%:99:5.0549E-28:38:1:1:0:50 1/1:42:44:22:22:43:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:45:41:21:20:40:97.62%:99:2.3541E-24:0:0:0:0:41 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:52:26:26:53:96.3%:99:6.1952E-29:37:2:1:1:54 1/1:45:27:17:10:28:96.43%:99:3.7915E-15:37:1:0:1:28 1/1:44:32:16:16:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:41:21:13:8:22:95.45%:99:1.0931E-11:38:1:1:0:22 1/1:42:26:11:15:27:96.3%:99:1.4382E-14:32:1:1:0:27 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:15:19:35:94.44%:99:1.5887E-18:60:2:1:1:36 1/1:40:50:32:18:49:94.34%:99:4.4193E-27:43:3:2:1:53 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:13:11:26:92.31%:99:7.6222E-13:35:2:0:2:26 1/1:39:40:17:23:38:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:27:13:14:26:96.43%:99:3.7915E-15:38:1:1:0:28 1/1:42:33:18:15:34:97.06%:99:1.2301E-18:36:1:1:0:34 1/1:43:29:17:12:31:93.55%:99:1.1344E-15:31:2:0:2:31 1/1:41:29:17:12:29:96.67%:99:2.6212E-16:37:1:1:0:31 1/1:42:29:17:12:30:96.67%:99:2.6212E-16:37:1:0:1:30 1/1:44:36:19:17:37:97.3%:99:2.1762E-20:39:1:0:1:37 1/1:49:43:22:21:44:97.73%:99:1.7144E-24:33:1:1:0:44 1/1:44:43:24:19:43:97.73%:99:1.7144E-24:60:1:1:0:44 1/1:46:53:22:31:52:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:29:18:11:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:30:17:13:30:96.77%:99:6.8754E-17:35:1:0:1:31 1/1:46:16:8:8:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:33:17:16:31:97.06%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:52:31:16:15:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:13:15:29:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:43:21:13:8:21:95.45%:99:1.0931E-11:37:1:1:0:22 1/1:37:25:13:12:25:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:48:31:13:18:32:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:24:9:15:23:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:20:10:10:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:17:17:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:26:10:16:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:53:24:12:12:26:92.31%:99:7.6222E-13:35:2:0:2:26 1/1:46:42:25:17:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:17:10:7:18:94.44%:86:2.0936E-9:37:1:0:1:18 1/1:42:42:18:24:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:26:13:13:27:96.3%:99:1.4382E-14:36:1:0:1:27 1/1:40:53:31:22:53:98.15%:99:2.2126E-30:37:1:0:1:54 1/1:42:33:17:16:33:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:42:23:19:42:97.67%:99:6.6289E-24:33:1:0:1:43 1/1:42:31:16:15:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:18:18:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:33:14:19:34:97.06%:99:1.2301E-18:28:1:1:0:34 1/1:40:24:7:17:23:100%:99:3.101E-14:0:0:0:0:24 1/1:40:24:12:12:23:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:13:9:22:95.65%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:21:12:31:100%:99:1.3852E-19:0:0:0:0:33 0/1:43:30:17:13:34:88.24%:99:2.5943E-15:41:4:1:3:34 1/1:42:34:19:15:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:14:15:30:96.67%:99:2.6212E-16:29:1:0:1:30 1/1:45:22:15:7:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:40:20:20:38:97.56%:99:9.8874E-23:35:1:1:0:41 1/1:40:41:14:27:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:44:22:22:44:97.78%:99:4.4304E-25:34:1:0:1:45 1/1:42:23:10:13:21:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:62:35:27:61:98.41%:99:1.0605E-35:31:1:1:0:63 1/1:43:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:26:13:13:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:28:16:12:27:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:40:48:22:26:47:100%:99:1.554E-28:0:0:0:0:48 1/1:42:38:17:21:40:95%:99:8.0088E-21:31:2:1:1:40 1/1:42:42:18:24:42:97.67%:99:6.6289E-24:30:1:1:0:43 1/1:37:49:25:24:47:100%:99:3.925E-29:0:0:0:0:49 1/1:35:40:21:19:38:93.02%:99:9.8874E-23:33:1:0:1:41 1/1:38:23:13:10:23:92%:99:7.7525E-13:33:1:1:0:26 1/1:40:39:13:26:37:97.5%:99:3.8137E-22:37:1:0:1:40 1/1:38:34:19:15:34:97.14%:99:3.2089E-19:37:1:0:1:35 1/1:37:41:20:21:38:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:35:16:19:37:94.59%:99:4.2437E-19:34:2:1:1:37 1/1:37:50:28:22:48:96.15%:99:9.0394E-28:32:2:2:0:52 1/1:39:33:18:15:33:97.06%:99:1.2301E-18:38:1:1:0:34 1/1:40:38:23:15:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:62:32:30:62:95.38%:99:8.9557E-35:32:2:0:2:65 1/1:43:52:25:27:54:96.3%:99:6.1952E-29:46:2:1:1:54 1/1:41:40:18:22:42:95.24%:99:5.6346E-22:34:2:2:0:42 1/1:40:32:13:19:32:96.97%:99:4.7095E-18:60:1:0:1:34 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:17:20:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:36:20:16:36:94.74%:99:1.1316E-19:34:2:1:1:38 1/1:44:33:13:20:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:13:8:5:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:33:21:12:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:43:19:24:41:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:63:36:27:64:96.92%:99:2.3257E-35:33:2:2:0:65 1/1:42:28:15:13:29:96.55%:99:9.9776E-16:24:1:1:0:29 MTB_anc 2560650 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|yjcE_Rv2287|gene2331|transcript|Transcript_gene2331|Coding|1/1|c.948G>A|p.Leu316Leu|948/1629|948/1629|316/542||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2560650G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2560650G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:20:12:8:21:95.24%:99:4.0873E-11:37:1:1:0:21 1/1:42:28:19:9:29:96.55%:99:9.9776E-16:39:1:1:0:29 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:47:33:14:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:19:7:27:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:30:25:5:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:48:33:15:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:48:36:12:48:100%:99:1.554E-28:0:0:0:0:49 1/1:37:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:39:32:7:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:36:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:35:30:5:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 2562783 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|lppO_Rv2290|gene2334|transcript|Transcript_gene2334|Coding|1/1|c.185C>T|p.Ala62Val|185/516|185/516|62/171||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2562783C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2562783C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:51:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:51:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:46:24:22:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:36:16:20:37:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:63:34:29:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:37:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:36:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 2563958 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|sseB_Rv2291|gene2335|transcript|Transcript_gene2335|Coding|1/1|c.785C>A|p.Ala262Glu|785/855|785/855|262/284||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2563958C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2563958C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:52:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:60:34:26:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:45:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:52 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:38:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:38:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:55 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 2566768 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv2294_Rv2294-Rv2295_Rv2295|gene2338-gene2339|intergenic_region|gene2338-gene2339|||n.2566768G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:16:12:29:96.55%:99:1.3074E-16:0:0:0:0:31 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:26:12:14:28:92.86%:99:2.0165E-15:0:0:0:0:28 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:44:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:71:37:34:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:46:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:52:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:60:28:32:60:100%:99:1.035E-35:0:0:0:0:63 1/1:42:60:31:29:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:53:16:37:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 MTB_anc 2568273 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2296_Rv2296|gene2340|transcript|Transcript_gene2340|Coding|1/1|c.770A>G|p.Asp257Gly|770/903|770/903|257/300||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2568273A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2568273A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:15:12:28:96.43%:99:3.7915E-15:35:1:1:0:28 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:63:38:25:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:49:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:17:15:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:60:44:16:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:31:15:16:32:96.88%:99:1.8007E-17:36:1:1:0:32 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 MTB_anc 2570032 . T C . PASS AC=68;AF=0.227;AN=300;ANN=C|synonymous_variant|LOW|Rv2298_Rv2298|gene2342|transcript|Transcript_gene2342|Coding|1/1|c.951T>C|p.Arg317Arg|951/972|951/972|317/323||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2570032T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2570032T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:60:1:1:0:12:8.33%:14:5E-1:47:11:3:8:12 0/0:0:0:0:0:54:0%:99:1E0:47:54:23:31:54 0/0:0:0:0:0:25:0%:48:1E0:48:25:9:16:25 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:35:0%:67:1E0:48:35:20:15:36 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:21 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:48 0/0:0:0:0:0:17:0%:33:1E0:53:17:10:7:17 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:46 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:18 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 1/1:44:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:26:0%:47:1E0:49:26:9:17:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:52:0%:96:1E0:42:52:20:32:52 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:28 1/1:42:16:8:8:17:94.12%:81:7.7134E-9:39:1:0:1:17 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:43:0%:82:1E0:47:43:24:19:43 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:41:0%:78:1E0:48:41:22:19:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:43:0%:82:1E0:44:43:17:26:46 0/0:0:0:0:0:48:0%:89:1E0:46:48:16:32:48 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:38:1:0:1:28:3.57%:41:5E-1:44:27:11:16:29 0/0:38:1:1:0:32:3.12%:48:5E-1:46:31:11:20:33 0/0:0:0:0:0:25:0%:48:1E0:49:25:16:9:25 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:48 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:36:1:1:0:34:2.94%:51:5E-1:43:33:16:17:34 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:47 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 1/1:45:33:11:22:34:97.06%:99:1.2301E-18:39:1:1:0:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:45 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:33:16:17:34:97.06%:99:1.2301E-18:38:1:1:0:34 1/1:46:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 1/1:53:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:18:0%:32:1E0:47:18:7:11:18 1/1:48:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:21 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 1/1:42:48:26:22:49:97.96%:99:1.9625E-27:37:1:0:1:50 0/0:0:0:0:0:25:0%:48:1E0:52:25:13:12:26 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:15 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:31 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:18 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:27 0/0:0:0:0:0:53:0%:99:1E0:41:53:28:25:53 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:49:30:10:20:30 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 1/1:41:45:19:26:46:97.83%:99:1.1441E-25:60:1:0:1:47 0/0:38:1:0:1:23:4.35%:34:5E-1:40:22:14:8:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:20:8:28 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:15:0%:29:1E0:49:15:6:9:15 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:25:9:34 0/0:0:0:0:0:38:0%:70:1E0:48:38:17:21:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:12:0%:21:1E0:41:12:7:5:14 0/0:0:0:0:0:70:0%:99:1E0:42:70:33:37:70 1/1:45:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:16:0%:29:1E0:42:16:4:12:16 1/1:39:46:24:22:47:97.87%:99:2.9526E-26:38:1:1:0:49 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:49 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:41 0/0:0:0:0:0:51:0%:97:1E0:39:51:23:28:52 0/0:0:0:0:0:37:0%:70:1E0:38:37:15:22:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:29 1/1:39:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:46:0%:85:1E0:38:46:22:24:48 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:20 1/1:40:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:55:0%:99:1E0:41:55:25:30:55 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 MTB_anc 2574022 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv2302_Rv2302|gene2346|transcript|Transcript_gene2346|Coding|1/1|c.210C>T|p.Arg70Arg|210/243|210/243|70/80||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2574022C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2574022C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:52:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:70:33:37:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:66:31:35:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:32:19:13:33:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:25:11:14:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:46:24:22:47:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:62:37:25:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:25:12:13:26:96.15%:99:5.4444E-14:35:1:0:1:26 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:60:33:27:60:100%:99:1.035E-35:0:0:0:0:62 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:52 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:48:17:31:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 MTB_anc 2577246 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2577246G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2577246G>A||||||,A|intragenic_variant|MODIFIER|Rv2306A_Rv2306A|gene2350|gene_variant|gene2350|||n.2577246G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:53 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:44:16:28:45:97.78%:99:3.8097E-26:0:0:0:0:46 1/1:41:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 MTB_anc 2578975 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv2307c_Rv2307c-Rv2307A_Rv2307A|gene2351-gene2352|intergenic_region|gene2351-gene2352|||n.2578975G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:18:10:8:19:94.74%:92:5.6585E-10:38:1:0:1:19 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:41:24:17:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:46:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:31:15:16:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:32:17:15:33:96.97%:99:5.4567E-19:0:0:0:0:36 1/1:36:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 2580887 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv2308_Rv2308|gene2355|transcript|Transcript_gene2355|Coding|1/1|c.469G>A|p.Gly157Ser|469/717|469/717|157/238||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2580887G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2580887G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:61:0%:99:1E0:44:61:25:36:61 0/0:0:0:0:0:29:0%:55:1E0:51:29:16:13:29 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:52 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:33 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:44:0%:81:1E0:46:44:26:18:45 0/0:0:0:0:0:37:0%:70:1E0:52:37:19:18:37 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:48:29:10:19:30 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:34 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:45 0/0:0:0:0:0:25:0%:48:1E0:50:25:13:12:25 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:18:0%:32:1E0:52:18:9:9:19 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:16 0/0:0:0:0:0:47:0%:89:1E0:46:47:20:27:48 0/0:0:0:0:0:24:0%:44:1E0:49:24:7:17:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:34:0%:62:1E0:50:34:13:21:34 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:21 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:36 0/0:0:0:0:0:49:0%:93:1E0:48:49:26:23:49 0/0:0:0:0:0:49:0%:93:1E0:46:49:21:28:49 0/0:0:0:0:0:37:0%:70:1E0:47:37:10:27:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:43:0%:82:1E0:46:43:16:27:44 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:21 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:30 0/0:0:0:0:0:47:0%:89:1E0:45:47:28:19:48 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:9:0%:18:1E0:45:9:5:4:9 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:20 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:39 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:30 0/0:0:0:0:0:46:0%:85:1E0:48:46:26:20:46 0/0:0:0:0:0:49:0%:93:1E0:47:49:22:27:49 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:36:0%:66:1E0:45:36:24:12:36 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:18 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:51:30:13:17:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:17:7:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:25:1:0:1:37:2.7%:59:5E-1:44:36:17:19:38 0/0:0:0:0:0:30:0%:55:1E0:47:30:8:22:30 0/0:0:0:0:0:40:0%:74:1E0:48:40:24:16:40 0/0:0:0:0:0:19:0%:37:1E0:50:19:6:13:19 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:35 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:18:0%:32:1E0:45:18:12:6:18 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:50:28:12:16:28 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:46 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:47:0%:89:1E0:45:47:28:19:47 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:25 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:34 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:35:1:1:0:33:3.03%:52:5E-1:42:32:16:16:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:40 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:24:1:0:1:35:2.86%:55:5E-1:49:34:19:15:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:12:26:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:20 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:41 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:43 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:38 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:44 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:0:0:0:0:58:0%:99:1E0:42:58:27:31:58 0/0:38:1:1:0:61:1.64%:99:5E-1:41:60:27:33:62 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:26 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 0/0:0:0:0:0:58:0%:99:1E0:40:58:28:30:60 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:41:0%:78:1E0:38:41:19:22:43 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:47 0/0:33:1:1:0:33:3.03%:52:5E-1:39:32:20:12:33 0/0:0:0:0:0:47:0%:89:1E0:40:47:26:21:51 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:41 0/0:0:0:0:0:50:0%:92:1E0:38:50:24:26:52 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:60:0%:99:1E0:38:60:25:35:60 0/0:36:1:1:0:33:3.03%:52:5E-1:43:32:17:15:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 0/0:0:0:0:0:49:0%:93:1E0:44:49:21:28:51 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:44:0%:81:1E0:41:44:15:29:44 0/0:0:0:0:0:14:0%:25:1E0:44:14:7:7:14 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:46 0/0:0:0:0:0:44:0%:81:1E0:41:44:29:15:44 MTB_anc 2581109 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv2308_Rv2308|gene2355|transcript|Transcript_gene2355|Coding|1/1|c.691A>C|p.Arg231Arg|691/717|691/717|231/238||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2581109A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2581109A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:50:23:27:51:98.04%:99:1.3013E-28:36:1:1:0:51 1/1:51:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:53:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:53:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:61:26:35:61:100%:99:2.609E-36:0:0:0:0:63 1/1:42:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:38:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 MTB_anc 2604156 . TCAGTGCCAA T . PASS AC=9;AF=0.030;AN=300;ANN=T|inframe_deletion|MODERATE|lppP_Rv2330c|gene2377|transcript|Transcript_gene2377|Coding|1/1|c.58_66delTTGGCACTG|p.Leu20_Leu22del|66/528|58/528|20/175||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.2604157_2604165delCAGTGCCAA||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2604157_2604165delCAGTGCCAA||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2604157_2604165delCAGTGCCAA||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:38 0/0:0:0:0:0:27:0%:52:1E0:50:27:15:12:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:17:26:43 0/0:0:0:0:0:38:0%:70:1E0:50:38:13:25:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:30:0%:55:1E0:49:30:20:10:30 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:29 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:24 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:26 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:22 0/0:0:0:0:0:21:0%:40:1E0:51:21:16:5:22 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:28:0%:51:1E0:50:28:20:8:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:22:0%:40:1E0:51:22:13:9:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:20 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:47:35:13:22:35 0/0:37:1:1:0:21:4.76%:31:5E-1:41:20:8:12:21 0/0:0:0:0:0:39:0%:74:1E0:50:39:16:23:40 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:26 0/0:0:0:0:0:58:0%:99:1E0:49:58:19:39:58 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:32 0/0:0:0:0:0:44:0%:81:1E0:51:44:22:22:46 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:29 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:32 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:13:0%:25:1E0:46:13:6:7:13 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:51:0%:97:1E0:43:51:26:25:52 0/0:0:0:0:0:43:0%:82:1E0:44:43:17:26:45 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:31 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:27 0/0:39:1:1:0:33:3.03%:52:5E-1:44:32:19:13:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:34 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:44 0/0:60:1:0:1:51:1.96%:84:5E-1:46:50:21:29:51 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:14:0%:25:1E0:43:14:3:11:14 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:21 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:19:0%:37:1E0:50:19:12:7:19 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:50:33:17:16:33 0/0:60:1:0:1:27:3.7%:41:5E-1:42:26:12:14:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:11:22:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:39 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:44:0%:81:1E0:49:44:22:22:44 0/0:0:0:0:0:23:0%:44:1E0:54:23:11:12:24 0/0:37:1:0:1:43:2.33%:70:5E-1:40:42:22:20:43 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:55 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/1:44:28:12:16:33:82.35%:99:1.349E-13:45:6:3:3:35 0/0:37:1:1:0:36:2.78%:55:5E-1:43:35:18:17:37 1/1:45:39:20:19:43:90.7%:99:2.6872E-20:35:4:4:0:43 0/1:45:22:12:10:25:88%:99:2.5916E-11:35:3:2:1:25 0/1:43:31:17:14:39:79.49%:99:1.1554E-14:46:8:6:2:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:20:9:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 1/1:45:26:18:8:28:92.86%:99:5.6872E-14:47:2:2:0:28 0/1:47:21:9:12:26:80.77%:94:3.4262E-10:44:5:0:5:26 0/1:40:35:17:18:41:77.78%:99:2.817E-16:41:10:5:5:45 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:60:1:1:0:38:2.63%:58:5E-1:46:37:18:19:39 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:25:0%:48:1E0:40:25:18:7:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:35 0/0:0:0:0:0:50:0%:92:1E0:43:50:24:26:50 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:29 0/0:0:0:0:0:50:0%:92:1E0:43:50:23:27:51 0/0:0:0:0:0:52:0%:96:1E0:41:52:38:14:52 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:28 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:52 0/0:0:0:0:0:50:0%:92:1E0:40:50:25:25:53 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:46 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:45 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:42 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:30 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:50 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:71:0%:99:1E0:40:71:34:37:75 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:54 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:19 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:44:3:1:2:37:8.11%:43:1.1986E-1:44:34:16:18:37 0/0:0:0:0:0:55:0%:99:1E0:42:55:26:29:55 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 MTB_anc 2605293 . T G . PASS AC=286;AF=1.00;AN=286;ANN=G|missense_variant|MODERATE|mez_Rv2332|gene2380|transcript|Transcript_gene2380|Coding|1/1|c.186T>G|p.Asp62Glu|186/1647|186/1647|62/548||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2605293T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2605293T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:22:15:7:23:95.65%:99:2.9149E-12:37:1:1:0:24 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 ./. 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:42 ./. ./. ./. ./. ./. 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:12:10:23:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:14:20:35:97.14%:99:3.2089E-19:29:1:0:1:36 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:61:34:27:61:100%:99:2.609E-36:0:0:0:0:62 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:38:41:24:17:42:97.62%:99:2.3541E-24:0:0:0:0:46 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 ./. 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 MTB_anc 2606713 . C T . PASS AC=2;AF=6.993e-03;AN=286;ANN=T|stop_gained|HIGH|mez_Rv2332|gene2380|transcript|Transcript_gene2380|Coding|1/1|c.1606C>T|p.Gln536*|1606/1647|1606/1647|536/548||,T|missense_variant|MODERATE|stp_Rv2333c|gene2381|transcript|Transcript_gene2381|Coding|1/1|c.1609G>A|p.Ala537Thr|1609/1614|1609/1614|537/537||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2606713C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2606713C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2606713C>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:29:18:47 0/0:0:0:0:0:34:0%:62:1E0:52:34:18:16:34 0/0:0:0:0:0:53:0%:99:1E0:49:53:25:28:53 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:39 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:32 0/0:0:0:0:0:37:0%:70:1E0:48:37:16:21:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:41:0%:78:1E0:50:41:18:23:41 0/0:0:0:0:0:30:0%:55:1E0:52:30:19:11:31 0/0:0:0:0:0:39:0%:74:1E0:49:39:21:18:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:43 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:49:0%:93:1E0:48:49:21:28:50 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:55:0%:99:1E0:50:55:29:26:57 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:44 0/0:0:0:0:0:46:0%:85:1E0:44:46:17:29:46 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:34:0%:62:1E0:51:34:21:13:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:40 0/0:0:0:0:0:73:0%:99:1E0:45:73:43:30:74 0/0:60:1:0:1:32:3.12%:48:5E-1:48:31:15:16:32 0/0:0:0:0:0:48:0%:89:1E0:45:48:29:19:49 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:19 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:45 0/0:60:1:0:1:40:2.5%:62:5E-1:45:39:20:19:40 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:35 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:10:22:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 ./. 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:41:0%:78:1E0:45:41:25:16:41 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. 0/0:0:0:0:0:13:0%:25:1E0:46:13:4:9:13 0/0:0:0:0:0:20:0%:36:1E0:51:20:9:11:20 0/0:0:0:0:0:33:0%:63:1E0:51:33:12:21:33 0/0:0:0:0:0:35:0%:67:1E0:50:35:21:14:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:39:1:1:0:32:3.12%:48:5E-1:47:31:15:16:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:19:0%:37:1E0:49:19:7:12:21 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:60:1:0:1:19:5.26%:28:5E-1:45:18:8:10:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:37:0%:70:1E0:49:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:24 0/0:39:1:0:1:30:3.33%:44:5E-1:46:29:10:19:30 0/0:0:0:0:0:25:0%:48:1E0:51:25:6:19:25 0/0:0:0:0:0:42:0%:77:1E0:41:42:27:15:43 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:38 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:43 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:41 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:32 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:63:0%:99:1E0:42:63:24:39:64 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:12:21:33 0/0:0:0:0:0:54:0%:99:1E0:43:54:28:26:54 0/0:0:0:0:0:60:0%:99:1E0:41:60:25:35:60 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:58:0%:99:1E0:41:58:34:24:60 0/0:0:0:0:0:45:0%:85:1E0:41:45:16:29:45 0/0:0:0:0:0:57:0%:99:1E0:40:57:31:26:58 0/0:0:0:0:0:54:0%:99:1E0:39:54:26:28:54 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:14:30:44 0/0:0:0:0:0:51:0%:97:1E0:43:51:31:20:52 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:44 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:45 ./. 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:50:0%:92:1E0:39:50:21:29:52 0/0:0:0:0:0:50:0%:92:1E0:43:50:21:29:50 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:25:13:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:39 0/0:0:0:0:0:16:0%:29:1E0:43:16:11:5:17 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:43 0/0:0:0:0:0:50:0%:92:1E0:44:50:30:20:51 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 MTB_anc 2608488 . C T . PASS AC=286;AF=1.00;AN=286;ANN=T|intergenic_region|MODIFIER|stp_Rv2333c-cysK1_Rv2334|gene2381-gene2382|intergenic_region|gene2381-gene2382|||n.2608488C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 ./. 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:51:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:54:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:70:37:33:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:43:61:27:34:61:100%:99:2.609E-36:0:0:0:0:64 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:61:34:27:61:100%:99:2.609E-36:0:0:0:0:63 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:41:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 ./. 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:63:30:33:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 2610702 . T C . PASS AC=286;AF=1.00;AN=286;ANN=C|intergenic_region|MODIFIER|cysE_Rv2335-Rv2336_Rv2336|gene2383-gene2384|intergenic_region|gene2383-gene2384|||n.2610702T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:51:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:18:10:8:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:50:25:25:51:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 ./. 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 ./. ./. ./. ./. ./. 1/1:52:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:14:15:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:18:9:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:54:26:28:55:98.18%:99:5.6837E-31:32:1:1:0:57 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 ./. 1/1:41:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:19:10:9:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 2613884 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|synonymous_variant|LOW|moeW_Rv2338c|gene2386|transcript|Transcript_gene2386|Coding|1/1|c.180C>T|p.Ala60Ala|180/957|180/957|60/318||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2613884G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2613884G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:25 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:16 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:45 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:34 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:16 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:28 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:49 0/0:0:0:0:0:43:0%:82:1E0:49:43:18:25:43 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:42 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:46 0/0:0:0:0:0:38:0%:70:1E0:52:38:21:17:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:39 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:45:21:6:15:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:16:0%:29:1E0:48:16:14:2:18 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:56 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:32 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:44 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:18 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:32 0/0:0:0:0:0:38:0%:70:1E0:47:38:18:20:38 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:43 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:46 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:41 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:30 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:52 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:19 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:29 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:12 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:42 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:49 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:17 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:33 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:38:1:1:0:41:2.44%:66:5E-1:47:40:18:22:42 0/0:0:0:0:0:14:0%:25:1E0:45:14:11:3:14 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:0:0:0:0:47:0%:89:1E0:42:47:29:18:50 0/0:0:0:0:0:35:0%:67:1E0:48:35:14:21:35 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:20 0/0:0:0:0:0:50:0%:92:1E0:48:50:26:24:53 0/0:0:0:0:0:29:0%:55:1E0:43:29:8:21:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:41 0/0:0:0:0:0:13:0%:25:1E0:48:13:5:8:14 0/0:0:0:0:0:20:0%:36:1E0:51:20:12:8:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:23:0%:44:1E0:51:23:15:8:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:25 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:42 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:29:0%:55:1E0:47:29:9:20:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:34 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:27 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:50 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:26:12:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:38 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:23 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:43:0%:82:1E0:46:43:25:18:45 0/0:0:0:0:0:37:0%:70:1E0:45:37:26:11:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:33 0/0:0:0:0:0:30:0%:55:1E0:37:30:19:11:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:50 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:39 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:30 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:63:33:30:63:100%:99:1.657E-37:0:0:0:0:64 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:54 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:30 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:53 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:55 0/0:0:0:0:0:47:0%:89:1E0:38:47:20:27:50 0/0:0:0:0:0:50:0%:92:1E0:41:50:30:20:52 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:38 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:53 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:34 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:46 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:37 0/0:0:0:0:0:51:0%:97:1E0:41:51:29:22:56 0/0:0:0:0:0:34:0%:62:1E0:39:34:22:12:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:32 0/0:0:0:0:0:53:0%:99:1E0:37:53:24:29:55 0/0:0:0:0:0:54:0%:99:1E0:39:54:28:26:60 0/0:38:1:1:0:45:2.22%:73:5E-1:44:44:21:23:49 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:47 0/0:0:0:0:0:47:0%:89:1E0:46:47:20:27:50 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:45 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:38 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:46 0/0:0:0:0:0:55:0%:99:1E0:42:55:34:21:57 0/0:0:0:0:0:28:0%:51:1E0:41:28:7:21:31 MTB_anc 2614754 . G T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|mmpL9_Rv2339|gene2387|transcript|Transcript_gene2387|Coding|1/1|c.62G>T|p.Arg21Leu|62/2889|62/2889|21/962||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2614754G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2614754G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:45:52:26:26:52 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:55:0%:99:1E0:49:55:21:34:55 0/0:0:0:0:0:51:0%:97:1E0:46:51:19:32:51 0/0:60:1:1:0:26:3.85%:38:5E-1:43:25:12:13:26 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:32 0/0:0:0:0:0:33:0%:63:1E0:50:33:17:16:33 0/0:0:0:0:0:40:0%:74:1E0:49:40:23:17:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:23 0/0:0:0:0:0:72:0%:99:1E0:47:72:45:27:72 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:31 0/0:0:0:0:0:35:0%:67:1E0:47:35:24:11:35 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:56:0%:99:1E0:44:56:24:32:57 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:15:24:39 0/0:60:1:0:1:24:4.17%:34:5E-1:43:23:15:8:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:45 0/0:0:0:0:0:38:0%:70:1E0:49:38:23:15:38 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:39 0/0:0:0:0:0:58:0%:99:1E0:50:58:27:31:59 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:52 0/0:31:1:1:0:42:2.38%:66:5E-1:45:41:15:26:43 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:46 0/0:38:1:1:0:38:2.63%:58:5E-1:42:37:16:21:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:41:31:21:10:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:37 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:46 0/0:0:0:0:0:47:0%:89:1E0:46:47:24:23:47 0/0:39:1:0:1:22:4.55%:31:5E-1:50:21:10:11:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:37 0/0:0:0:0:0:19:0%:37:1E0:51:19:8:11:19 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:45 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:44 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:23 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:39 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:47 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:49:0%:93:1E0:46:49:22:27:49 0/0:0:0:0:0:76:0%:99:1E0:46:76:36:40:76 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:40 0/0:0:0:0:0:8:0%:14:1E0:48:8:2:6:8 0/0:0:0:0:0:29:0%:55:1E0:47:29:10:19:29 0/0:0:0:0:0:42:0%:77:1E0:46:42:27:15:42 0/0:0:0:0:0:23:0%:44:1E0:46:23:7:16:24 0/0:0:0:0:0:26:0%:47:1E0:50:26:10:16:26 0/0:0:0:0:0:41:0%:78:1E0:49:41:21:20:41 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:51 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:38 0/0:0:0:0:0:20:0%:36:1E0:46:20:7:13:21 0/0:0:0:0:0:56:0%:99:1E0:41:56:27:29:57 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:44 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:48 0/0:0:0:0:0:23:0%:44:1E0:48:23:8:15:23 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:43 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:48:36:16:20:37 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:31 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:26 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:12:26:38 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:47 0/0:0:0:0:0:56:0%:99:1E0:43:56:25:31:57 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:33 0/0:0:0:0:0:63:0%:99:1E0:41:63:31:32:63 0/0:0:0:0:0:50:0%:92:1E0:43:50:21:29:52 0/0:0:0:0:0:18:0%:32:1E0:43:18:12:6:19 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:38 0/0:0:0:0:0:50:0%:92:1E0:43:50:30:20:51 0/0:0:0:0:0:51:0%:97:1E0:40:51:27:24:52 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:45 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:44 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:13:29:42 0/0:0:0:0:0:52:0%:96:1E0:40:52:28:24:53 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:40:0%:74:1E0:38:40:21:19:41 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:56:0%:99:1E0:40:56:29:27:56 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:44 0/0:0:0:0:0:55:0%:99:1E0:41:55:31:24:56 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:43 0/0:0:0:0:0:41:0%:78:1E0:47:41:25:16:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:60:1:1:0:32:3.12%:48:5E-1:47:31:18:13:32 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:48 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:38:1:1:0:43:2.33%:70:5E-1:41:42:17:25:44 0/0:0:0:0:0:52:0%:96:1E0:40:52:24:28:54 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:36 MTB_anc 2616403 . TTCG T . PASS AC=297;AF=0.990;AN=300;ANN=T|inframe_deletion|MODERATE|mmpL9_Rv2339|gene2387|transcript|Transcript_gene2387|Coding|1/1|c.1714_1716delGTC|p.Val572del|1714/2889|1714/2889|572/962||INFO_REALIGN_3_PRIME,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2616404_2616406delTCG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2616404_2616406delTCG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:46:22:24:47:97.87%:99:2.9526E-26:37:1:0:1:47 0/1:53:18:11:7:21:85.71%:84:3.7603E-9:44:3:3:0:21 1/1:48:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:42:21:21:43:97.67%:99:6.6289E-24:60:1:1:0:43 1/1:44:38:21:17:39:95%:99:8.0088E-21:60:2:1:1:40 1/1:45:27:13:14:27:96.43%:99:3.7915E-15:35:1:1:0:28 1/1:50:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:22:8:14:22:91.67%:99:1.0078E-11:33:2:1:1:24 1/1:52:44:17:27:45:97.78%:99:4.4304E-25:60:1:0:1:45 1/1:50:29:14:15:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:48:42:21:21:42:97.67%:99:6.6289E-24:32:1:0:1:43 1/1:48:34:17:17:36:94.44%:99:1.5887E-18:31:2:1:1:36 1/1:47:40:22:18:43:93.02%:99:2.287E-21:42:3:0:3:43 1/1:47:41:15:26:44:95.35%:99:1.4915E-22:48:2:1:1:44 1/1:53:16:8:8:17:94.12%:81:7.7134E-9:32:1:0:1:17 1/1:50:27:16:11:29:90%:99:1.5465E-14:38:2:1:1:29 1/1:49:24:12:12:25:96%:99:2.0568E-13:34:1:1:0:25 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:22:11:11:23:91.67%:99:1.0078E-11:45:2:1:1:24 1/1:51:25:13:12:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:47:27:20:50:94%:99:2.3219E-25:34:3:1:2:50 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:49:25:24:50:98%:99:5.0549E-28:33:1:0:1:50 1/1:44:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:18:11:30:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:48:18:12:6:19:94.74%:92:5.6585E-10:60:1:1:0:19 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:13:9:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:51:32:19:13:34:94.12%:99:2.2142E-17:35:2:1:1:34 1/1:45:35:18:17:36:97.22%:99:8.3613E-20:34:1:1:0:36 1/1:48:44:24:20:44:97.78%:99:4.4304E-25:60:1:1:0:45 1/1:45:42:27:15:45:93.33%:99:1.6658E-22:44:3:2:1:45 1/1:46:47:25:22:48:97.92%:99:7.6145E-27:60:1:1:0:48 1/1:51:62:33:29:62:98.41%:99:1.0605E-35:37:1:1:0:63 1/1:46:49:24:25:50:98%:99:5.0549E-28:32:1:1:0:50 1/1:46:48:24:24:48:97.96%:99:1.9625E-27:32:1:1:0:49 1/1:43:34:13:21:35:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:47:35:19:16:36:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:44:30:19:11:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:28:11:17:29:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:44:19:9:10:20:95%:98:1.5234E-10:37:1:0:1:20 1/1:49:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:19:11:32:93.75%:99:3.0612E-16:49:2:1:1:32 1/1:47:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:41:25:16:43:93.18%:99:6.1775E-22:34:3:1:2:44 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:23:8:15:23:95.83%:99:7.7525E-13:37:1:0:1:24 1/1:50:27:18:9:28:93.1%:99:3.7915E-15:37:1:0:1:28 1/1:47:38:21:17:40:95%:99:8.0088E-21:33:2:2:0:40 1/1:39:24:13:11:23:100%:99:3.101E-14:0:0:0:0:24 1/1:47:31:15:16:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:42:36:21:15:36:97.3%:99:2.1762E-20:32:1:1:0:37 1/1:44:38:19:19:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:13:22:37:94.59%:99:4.2437E-19:35:2:2:0:37 1/1:51:38:18:20:41:92.68%:99:3.1178E-20:51:3:2:1:41 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:42:23:19:43:97.67%:99:6.6289E-24:33:1:0:1:43 1/1:46:47:22:25:49:95.92%:99:5.0044E-26:34:2:1:1:49 1/1:46:22:12:10:23:95.65%:99:2.9149E-12:60:1:0:1:23 1/1:47:18:9:9:18:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:45:50:26:24:50:96.15%:99:1.3013E-28:34:1:0:1:51 1/1:46:28:14:14:29:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:47:27:17:10:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:32:21:11:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:49:28:15:13:31:90.32%:99:1.2857E-14:43:3:1:2:31 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:20:12:8:20:95.24%:99:4.0873E-11:37:1:0:1:21 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:12:15:28:90%:99:4.6134E-14:55:3:1:2:30 1/1:48:20:9:11:21:95.24%:99:4.0873E-11:35:1:0:1:21 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:18:9:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:21:11:10:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:39:16:23:36:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:34:17:17:35:97.14%:99:3.2089E-19:33:1:1:0:35 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:11:15:27:96.3%:99:1.4382E-14:37:1:1:0:27 0/1:41:16:6:10:19:84.21%:73:4.357E-8:53:3:2:1:19 1/1:52:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:34:16:18:35:97.14%:99:3.2089E-19:33:1:0:1:35 1/1:47:28:13:15:29:96.55%:99:9.9776E-16:35:1:1:0:29 1/1:45:31:17:14:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:29:11:18:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:44:27:17:44:97.78%:99:4.4304E-25:37:1:1:0:46 1/1:44:27:12:15:28:96.43%:99:3.7915E-15:32:1:1:0:28 1/1:47:49:24:25:51:96.08%:99:3.4484E-27:34:2:2:0:51 1/1:44:28:13:15:31:90.32%:99:1.2857E-14:43:3:1:2:31 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:37:17:20:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:18:15:35:94.29%:99:5.9366E-18:37:2:0:2:35 1/1:44:20:12:8:22:90.91%:98:1.3117E-10:35:2:1:1:22 1/1:42:43:20:23:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:29:17:12:30:90.62%:99:3.5714E-15:33:3:2:1:32 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:44:22:22:45:97.78%:99:4.4304E-25:33:1:1:0:45 1/1:48:32:14:18:33:96.97%:99:4.7095E-18:34:1:1:0:33 1/1:46:38:17:21:39:97.44%:99:1.4697E-21:37:1:0:1:39 1/1:47:33:12:21:33:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:16:10:27:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:43:34:20:14:35:97.14%:99:3.2089E-19:34:1:1:0:35 1/1:40:38:22:16:38:97.44%:99:1.4697E-21:30:1:1:0:39 1/1:42:53:26:27:55:94.64%:99:8.323E-29:36:3:2:1:56 1/1:41:45:20:25:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:40:22:18:43:93.02%:99:2.287E-21:31:3:2:1:43 1/1:43:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:65:39:26:70:92.86%:99:1.8396E-34:34:5:1:4:70 1/1:43:62:28:34:63:95.38%:99:5.2716E-34:35:3:1:2:65 1/1:44:21:12:9:22:95.45%:99:1.0931E-11:33:1:1:0:22 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:47:24:23:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:46:28:18:48:95.83%:99:1.9036E-25:35:2:1:1:48 1/1:39:46:21:25:45:97.87%:99:2.9526E-26:37:1:1:0:47 1/1:40:50:31:19:47:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:44:19:25:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:41:22:19:42:97.62%:99:2.5612E-23:37:1:1:0:42 1/1:44:40:17:23:42:95.24%:99:5.6346E-22:33:2:0:2:42 1/1:42:48:27:21:47:100%:99:1.554E-28:0:0:0:0:48 1/1:41:34:20:14:35:97.14%:99:3.2089E-19:32:1:0:1:35 1/1:42:40:18:22:40:97.56%:99:9.8874E-23:37:1:0:1:41 1/1:39:36:14:22:33:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:39:24:15:40:97.5%:99:3.8137E-22:37:1:1:0:41 1/1:39:61:36:25:59:100%:99:2.609E-36:0:0:0:0:61 1/1:43:46:24:22:43:95.83%:99:1.9036E-25:32:2:1:1:48 1/1:43:44:20:24:47:91.67%:99:4.207E-23:41:4:1:3:48 1/1:41:43:22:21:45:95.56%:99:1.0412E-23:35:2:1:1:45 1/1:42:34:14:20:36:94.44%:99:1.5887E-18:35:2:0:2:36 0/1:44:24:16:8:27:88.89%:99:2.0853E-12:33:3:2:1:27 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:40:18:22:41:97.56%:99:9.8874E-23:35:1:0:1:41 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:16:16:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:41:42:20:22:44:95.45%:99:3.9431E-23:35:2:1:1:44 1/1:47:61:34:27:61:100%:99:2.609E-36:0:0:0:0:61 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 2617673 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|PE_PGRS39_Rv2340c|gene2388|transcript|Transcript_gene2388|Coding|1/1|c.1236C>T|p.His412His|1236/1242|1236/1242|412/413||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2617673G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2617673G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:61:28:33:61:100%:99:2.609E-36:0:0:0:0:63 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:60:27:33:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:52:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:50:35:15:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:28:15:13:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:54:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 2619271 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|PE_PGRS39_Rv2340c-asnT_Rvnt25|gene2388-gene2389|intergenic_region|gene2388-gene2389|||n.2619271C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:20:10:10:21:95.24%:99:4.0873E-11:60:1:0:1:22 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:67:36:31:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:54:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:61:25:36:61:100%:99:2.609E-36:0:0:0:0:65 1/1:44:60:24:36:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:30:10:20:31:96.77%:99:6.8754E-17:39:1:1:0:32 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:67:40:27:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:67:33:34:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 2623818 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|intergenic_region|MODIFIER|dgt_Rv2344c-Rv2345_Rv2345|gene2393-gene2394|intergenic_region|gene2393-gene2394|||n.2623818G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:37 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:37:1:0:1:36:2.78%:55:5E-1:39:35:15:20:36 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:29 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:32 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:37:1:0:1:36:2.78%:55:5E-1:44:35:14:21:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:63:27:36:63:100%:99:1.657E-37:0:0:0:0:63 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:42 1/1:41:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:33 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:40:0%:74:1E0:41:40:12:28:40 0/0:0:0:0:0:49:0%:93:1E0:42:49:17:32:49 0/0:60:1:1:0:22:4.55%:31:5E-1:43:21:11:10:22 0/0:0:0:0:0:47:0%:89:1E0:43:47:17:30:47 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:8:19:27 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:19 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:45 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:17 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:17:5:12:18:94.44%:86:2.0936E-9:60:1:1:0:18 0/0:0:0:0:0:23:0%:44:1E0:43:23:6:17:23 0/0:39:1:0:1:36:2.78%:55:5E-1:42:35:12:23:36 0/0:0:0:0:0:27:0%:52:1E0:41:27:7:20:29 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:21:0%:40:1E0:38:21:4:17:21 0/0:60:1:0:1:37:2.7%:59:5E-1:45:36:19:17:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:22:0%:40:1E0:39:22:5:17:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:28 0/0:0:0:0:0:50:0%:92:1E0:40:50:17:33:51 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:5:15:20 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:45 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:45 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:29 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:41 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:29 0/0:0:0:0:0:46:0%:85:1E0:38:46:20:26:47 0/0:0:0:0:0:41:0%:78:1E0:39:41:16:25:42 0/0:0:0:0:0:41:0%:78:1E0:38:41:24:17:41 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:35 0/0:0:0:0:0:35:0%:67:1E0:39:35:10:25:36 0/0:0:0:0:0:46:0%:85:1E0:39:46:20:26:47 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:34:0%:62:1E0:36:34:16:18:35 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 1/1:38:36:19:17:37:97.3%:99:2.1762E-20:38:1:0:1:37 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:38:1:0:1:26:3.85%:38:5E-1:42:25:11:14:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:24 0/0:0:0:0:0:16:0%:29:1E0:44:16:4:12:16 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:50:0%:92:1E0:40:50:18:32:50 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 2625924 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|esxO_Rv2346c|gene2395|transcript|Transcript_gene2395|Coding|1/1|c.249G>A|p.Ala83Ala|249/285|249/285|83/94||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2625924C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2625924C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:30:13:17:31:96.77%:99:6.8754E-17:39:1:1:0:32 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:7:27:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:47:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:23:7:16:25:92%:99:2.7767E-12:49:2:1:1:27 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:26:8:18:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:14:3:11:15:93.33%:69:1.0315E-7:60:1:0:1:15 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:12:15:28:96.43%:99:3.7915E-15:37:1:0:1:28 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:24:7:17:25:96%:99:2.0568E-13:39:1:1:0:25 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:39:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:37:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:58:16:42:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2626108 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|esxO_Rv2346c|gene2395|transcript|Transcript_gene2395|Coding|1/1|c.65C>G|p.Ala22Gly|65/285|65/285|22/94||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2626108G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2626108G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:33:23:10:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:51:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:26:13:13:27:96.3%:99:1.4382E-14:34:1:1:0:27 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:47:33:14:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:19:8:11:20:95%:98:1.5234E-10:60:1:0:1:20 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:14:16:31:96.77%:99:6.8754E-17:37:1:1:0:32 1/1:42:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:52:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:27:16:11:28:96.43%:99:3.7915E-15:60:1:1:0:29 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:55:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:52:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:50:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:27:16:11:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:47:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:13:5:8:14:92.86%:64:3.7391E-7:60:1:1:0:14 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:37:13:24:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:45:38:17:21:40:95%:99:1.4508E-22:0:0:0:0:41 1/1:44:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 2626189 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|esxO_Rv2346c-esxP_Rv2347c|gene2395-gene2396|intergenic_region|gene2395-gene2396|||n.2626189A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:16:9:7:17:94.12%:81:7.7134E-9:39:1:0:1:17 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 2626191 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|esxO_Rv2346c-esxP_Rv2347c|gene2395-gene2396|intergenic_region|gene2395-gene2396|||n.2626191T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:14:10:25:96%:99:3.101E-14:0:0:0:0:25 1/1:50:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:34:13:21:35:97.14%:99:3.5146E-20:0:0:0:0:37 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:13:6:7:14:92.86%:70:9.6148E-8:0:0:0:0:15 1/1:49:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:38:29:9:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:41:26:15:42:97.62%:99:2.5612E-23:38:1:1:0:42 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 2626513 . T A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|esxP_Rv2347c|gene2396|transcript|Transcript_gene2396|Coding|1/1|c.7A>T|p.Thr3Ser|7/297|7/297|3/98||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2626513T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2626513T>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:47 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:61:0%:99:1E0:45:61:34:27:61 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:39 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:60:1:1:0:33:3.03%:52:5E-1:46:32:17:15:33 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:37:1:1:0:21:4.76%:31:5E-1:50:20:10:10:21 0/0:0:0:0:0:43:0%:82:1E0:45:43:15:28:43 0/0:34:1:0:1:25:4%:38:5E-1:46:24:11:13:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:46:0%:85:1E0:44:46:18:28:47 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:14:0%:25:1E0:51:14:7:7:14 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:21:0%:40:1E0:39:21:6:15:21 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:8:18:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:62:0%:99:1E0:46:62:28:34:63 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:47 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:33:1:0:1:28:3.57%:41:5E-1:44:27:16:11:29 0/0:0:0:0:0:52:0%:96:1E0:40:52:31:21:52 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:38 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:49:0%:93:1E0:44:49:24:25:49 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:30 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:39:1:0:1:42:2.38%:66:5E-1:45:41:21:20:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:52:0%:96:1E0:45:52:28:24:52 0/0:0:0:0:0:22:0%:40:1E0:43:22:5:17:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:46 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:66:0%:99:1E0:43:66:32:34:68 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:49 0/0:0:0:0:0:14:0%:25:1E0:47:14:4:10:14 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:34 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:43 0/0:0:0:0:0:27:0%:52:1E0:50:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:52:26:13:13:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:7:18:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:39 0/0:49:2:2:0:35:5.71%:47:2.4638E-1:45:33:16:17:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:29:1:1:0:20:5%:27:5E-1:43:19:6:13:21 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:45 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:41:0%:78:1E0:48:41:18:23:41 0/0:0:0:0:0:15:0%:29:1E0:45:15:4:11:15 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:42:0%:77:1E0:43:42:15:27:42 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:60:1:1:0:34:2.94%:51:5E-1:42:33:18:15:34 0/0:0:0:0:0:21:0%:40:1E0:46:21:6:15:22 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:45 0/0:39:1:1:0:41:2.44%:66:5E-1:42:40:20:20:42 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:45 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:45 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:42:0%:77:1E0:38:42:25:17:45 0/0:37:1:0:1:30:3.33%:44:5E-1:39:29:20:9:35 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:64:0%:99:1E0:41:64:33:31:64 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:28:0%:51:1E0:42:28:8:20:29 1/1:41:15:6:9:16:93.75%:75:2.8282E-8:33:1:0:1:18 0/0:0:0:0:0:50:0%:92:1E0:39:50:28:22:54 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:42 0/0:0:0:0:0:43:0%:82:1E0:39:43:18:25:45 0/0:38:1:0:1:30:3.33%:44:5E-1:40:29:10:19:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:31 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:30 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:39 0/0:39:1:0:1:36:2.78%:55:5E-1:41:35:22:13:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:41 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:49 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:29 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:48 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 MTB_anc 2626514 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|synonymous_variant|LOW|esxP_Rv2347c|gene2396|transcript|Transcript_gene2396|Coding|1/1|c.6A>C|p.Ala2Ala|6/297|6/297|2/98||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2626514T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2626514T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:47 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:60:0%:99:1E0:46:60:34:26:61 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:14:25:39 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:39 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:37:1:1:0:20:5%:27:5E-1:51:19:10:9:21 0/0:0:0:0:0:44:0%:81:1E0:45:44:16:28:44 0/0:60:1:0:1:24:4.17%:34:5E-1:45:23:12:11:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:33 0/0:0:0:0:0:47:0%:89:1E0:44:47:19:28:47 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:14:0%:25:1E0:52:14:7:7:14 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:21:0%:40:1E0:39:21:6:15:21 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:8:18:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:61:0%:99:1E0:46:61:28:33:63 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:48 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:41 0/0:33:1:0:1:28:3.57%:41:5E-1:45:27:15:12:28 0/0:0:0:0:0:52:0%:96:1E0:41:52:31:21:53 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:60:1:1:0:31:3.23%:48:5E-1:46:30:14:16:31 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:37:1:1:0:36:2.78%:55:5E-1:44:35:16:19:38 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:49:0%:93:1E0:44:49:24:25:49 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:38:1:0:1:42:2.38%:66:5E-1:45:41:21:20:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:52 0/0:0:0:0:0:23:0%:44:1E0:42:23:6:17:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:46 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:38 0/0:0:0:0:0:66:0%:99:1E0:43:66:32:34:68 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:49 0/0:0:0:0:0:14:0%:25:1E0:46:14:4:10:14 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:42 0/0:0:0:0:0:27:0%:52:1E0:50:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:37:1:0:1:41:2.44%:66:5E-1:44:40:20:20:41 0/0:0:0:0:0:30:0%:55:1E0:48:30:11:19:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:49:2:2:0:34:5.88%:43:2.4627E-1:45:32:15:17:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:32:1:1:0:21:4.76%:31:5E-1:41:20:6:14:21 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:44:0%:81:1E0:46:44:24:20:45 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:48:39:17:22:40 0/0:0:0:0:0:13:0%:25:1E0:48:13:4:9:14 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:38:0%:70:1E0:47:38:18:20:38 0/0:0:0:0:0:42:0%:77:1E0:43:42:15:27:42 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:29 0/0:60:1:1:0:34:2.94%:51:5E-1:42:33:19:14:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:7:15:22 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:45 0/0:38:1:1:0:40:2.5%:62:5E-1:42:39:20:19:42 0/0:0:0:0:0:29:0%:55:1E0:46:29:20:9:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:19 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:22 0/0:0:0:0:0:45:0%:85:1E0:39:45:27:18:46 0/0:37:1:0:1:31:3.23%:48:5E-1:39:30:21:9:35 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:64:0%:99:1E0:41:64:33:31:64 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:29 1/1:40:17:8:9:18:94.44%:86:2.0936E-9:39:1:0:1:18 0/0:0:0:0:0:54:0%:99:1E0:39:54:31:23:54 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:42 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:45 0/0:33:1:0:1:29:3.45%:45:5E-1:40:28:10:18:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:43 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:39 0/0:38:1:0:1:36:2.78%:55:5E-1:42:35:22:13:36 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:41 0/0:0:0:0:0:50:0%:92:1E0:42:50:22:28:50 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:48 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 MTB_anc 2626600 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|intergenic_region|MODIFIER|esxP_Rv2347c-Rv2348c_Rv2348c|gene2396-gene2397|intergenic_region|gene2396-gene2397|||n.2626600G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:36 0/0:0:0:0:0:13:0%:25:1E0:42:13:7:6:13 0/0:0:0:0:0:60:0%:99:1E0:41:60:30:30:62 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:39 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:60:1:1:0:32:3.12%:48:5E-1:44:31:17:14:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:60:1:1:0:41:2.44%:66:5E-1:46:40:23:17:44 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:39 0/0:60:1:1:0:15:6.67%:21:5E-1:43:14:5:9:16 0/0:37:1:1:0:37:2.7%:59:5E-1:43:36:14:22:40 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:20:6:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:23 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:28 0/0:60:1:0:1:28:3.57%:41:5E-1:43:27:11:16:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:23 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:44 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:24 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 0/0:35:2:0:2:23:8.7%:28:2.4444E-1:37:21:12:9:29 0/0:0:0:0:0:17:0%:33:1E0:48:17:14:3:17 0/0:0:0:0:0:26:0%:47:1E0:44:26:8:18:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:20 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:24 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:39 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:56:0%:99:1E0:41:56:28:28:58 0/0:0:0:0:0:51:0%:97:1E0:38:51:30:21:53 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:44 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:24 0/0:37:1:0:1:46:2.17%:73:5E-1:39:45:27:18:47 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:26 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:20 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:28 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:42 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:49 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:23 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:44 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:36 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:29 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:41 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:29 0/0:0:0:0:0:44:0%:81:1E0:41:44:30:14:44 0/0:60:1:1:0:44:2.27%:69:5E-1:39:43:25:18:49 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:37 0/0:0:0:0:0:69:0%:99:1E0:39:69:33:36:75 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:14:25:46 0/0:39:1:1:0:9:11.11%:11:5E-1:34:8:2:6:9 0/0:0:0:0:0:22:0%:40:1E0:47:22:15:7:23 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:17 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:0:0:0:0:47:0%:89:1E0:40:47:20:27:48 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:31 0/0:0:0:0:0:20:0%:36:1E0:41:20:6:14:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:33 0/0:32:2:0:2:24:8.33%:27:2.4468E-1:41:22:11:11:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:39:1:1:0:24:4.17%:34:5E-1:39:23:13:10:25 0/0:36:1:1:0:35:2.86%:55:5E-1:41:34:19:15:36 0/0:60:2:2:0:34:5.88%:43:2.4627E-1:41:32:16:16:36 0/0:39:1:0:1:35:2.86%:55:5E-1:42:34:16:18:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:7:16:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:23 0/0:0:0:0:0:50:0%:92:1E0:41:50:22:28:50 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:42 0/0:0:0:0:0:16:0%:29:1E0:44:16:4:12:18 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:43 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:39 0/0:0:0:0:0:52:0%:96:1E0:39:52:26:26:54 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:23 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:23 0/0:60:1:1:0:37:2.7%:59:5E-1:39:36:23:13:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:23 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:37 0/0:38:1:1:0:40:2.5%:62:5E-1:36:39:21:18:43 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:28 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:27 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:41 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:19:0%:37:1E0:35:19:9:10:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:44 0/0:0:0:0:0:19:0%:37:1E0:34:19:12:7:22 0/0:0:0:0:0:55:0%:99:1E0:37:55:36:19:58 0/0:0:0:0:0:38:0%:70:1E0:35:38:23:15:42 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:42 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:37 0/0:0:0:0:0:68:0%:99:1E0:37:68:31:37:72 0/0:0:0:0:0:50:0%:92:1E0:37:50:27:23:55 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 0/0:0:0:0:0:45:0%:85:1E0:38:45:29:16:48 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:34 0/0:0:0:0:0:32:0%:59:1E0:37:32:21:11:35 0/0:0:0:0:0:32:0%:59:1E0:36:32:16:16:40 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:36 0/0:0:0:0:0:34:0%:62:1E0:36:34:18:16:34 0/0:0:0:0:0:33:0%:63:1E0:38:33:22:11:37 0/0:0:0:0:0:31:0%:59:1E0:35:31:20:11:31 0/0:0:0:0:0:46:0%:85:1E0:39:46:20:26:51 0/0:0:0:0:0:29:0%:55:1E0:37:29:19:10:32 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:33 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:29 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:40 0/0:0:0:0:0:44:0%:81:1E0:34:44:27:17:45 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:29 0/0:0:0:0:0:33:0%:63:1E0:37:33:21:12:38 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:50 0/0:0:0:0:0:38:0%:70:1E0:38:38:15:23:40 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:45 0/0:0:0:0:0:43:0%:82:1E0:38:43:21:22:45 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:28:17:48 0/0:0:0:0:0:52:0%:96:1E0:37:52:31:21:54 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:37 MTB_anc 2633009 . GCATACCCGCCCCAGCACCCCC G . PASS AC=260;AF=0.922;AN=282;ANN=G|inframe_deletion|MODERATE|PPE38_Rv2352c|gene2401|transcript|Transcript_gene2401|Coding|1/1|c.1069_1089delGGGGGTGCTGGGGCGGGTATG|p.Gly357_Met363del|1089/1176|1069/1176|357/391||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2633010_2633030delCATACCCGCCCCAGCACCCCC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2633010_2633030delCATACCCGCCCCAGCACCCCC||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:14:6:8:16:87.5%:65:2.5454E-7:49:2:0:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:44:27:15:12:28:96.43%:99:3.7915E-15:60:1:1:0:28 0/1:42:12:7:5:14:85.71%:55:2.9913E-6:34:2:1:1:14 1/1:34:10:7:3:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:11:6:5:12:91.67%:53:4.8074E-6:60:1:1:0:12 1/1:38:16:6:10:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:19:12:7:20:95%:98:1.5234E-10:60:1:1:0:20 0/1:42:11:4:7:13:78.57%:47:1.6951E-5:58:3:2:1:14 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:17:12:5:18:94.44%:86:2.0936E-9:60:1:0:1:18 0/1:43:6:5:1:7:75%:24:3.4965E-3:60:2:1:1:8 0/1:37:15:9:6:17:78.95%:66:2.5053E-7:54:4:3:1:19 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:11:7:4:11:91.67%:53:4.8074E-6:60:1:1:0:12 1/1:37:17:9:8:16:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:5:4:8:100%:46:2.0568E-5:0:0:0:0:9 0/1:39:14:6:8:16:87.5%:65:2.5454E-7:60:2:1:1:16 1/1:38:23:12:11:23:95.83%:99:7.7525E-13:30:1:1:0:24 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:15:10:5:14:100%:81:6.4467E-9:0:0:0:0:15 0/1:44:7:3:4:8:87.5%:31:6.993E-4:60:1:0:1:8 1/1:35:11:8:3:9:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:17:12:5:17:94.44%:86:2.0936E-9:35:1:0:1:18 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:43:12:4:8:14:85.71%:55:2.9913E-6:60:2:1:1:14 1/1:45:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:11:6:5:10:91.67%:53:4.8074E-6:60:1:1:0:12 1/1:41:9:2:7:10:90%:42:5.9538E-5:60:1:0:1:10 1/1:48:19:6:13:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:21:14:7:23:91.3%:99:3.6437E-11:48:2:1:1:23 1/1:40:20:13:7:22:90.91%:98:1.3117E-10:48:2:1:1:22 1/1:43:10:3:7:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:19:13:6:20:90.48%:93:4.7003E-10:60:2:1:1:21 1/1:37:17:10:7:14:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:14:7:7:13:93.33%:69:1.0315E-7:60:1:0:1:15 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:20:12:8:21:95.24%:99:4.0873E-11:38:1:1:0:21 1/1:54:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:20:12:8:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 0/1:40:17:13:4:18:89.47%:82:5.9414E-9:43:2:1:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:43:8:5:3:10:80%:34:3.5723E-4:60:2:1:1:10 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 0/1:40:7:2:5:8:77.78%:29:1.1312E-3:45:2:2:0:9 1/1:40:14:11:3:14:93.33%:69:1.0315E-7:31:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:42:14:8:6:15:93.33%:69:1.0315E-7:60:1:1:0:15 1/1:41:10:7:3:11:90.91%:47:1.7011E-5:60:1:1:0:11 1/1:38:17:10:7:15:100%:93:4.2852E-10:0:0:0:0:17 0/1:43:12:7:5:14:85.71%:55:2.9913E-6:46:2:1:1:14 1/1:41:11:6:5:12:91.67%:53:4.8074E-6:38:1:1:0:12 1/1:39:10:8:2:11:90.91%:47:1.7011E-5:60:1:0:1:11 0/1:36:15:11:4:16:88.24%:71:7.3277E-8:46:2:1:1:17 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:20:13:7:21:90.91%:98:1.3117E-10:60:2:0:2:22 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:12:9:3:11:100%:64:3.698E-7:0:0:0:0:12 1/1:38:12:6:6:11:100%:64:3.698E-7:0:0:0:0:12 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:40:12:9:3:14:85.71%:55:2.9913E-6:46:2:2:0:14 1/1:44:12:9:3:12:92.31%:64:3.698E-7:0:0:0:0:12 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:13:7:6:14:92.86%:64:3.7391E-7:47:1:0:1:14 0/1:41:16:8:8:18:88.89%:76:2.0936E-8:60:2:1:1:19 1/1:32:12:5:7:11:100%:64:3.698E-7:0:0:0:0:12 1/1:39:12:8:4:13:92.31%:58:1.3461E-6:39:1:0:1:13 1/1:36:11:7:4:12:91.67%:53:4.8074E-6:58:1:0:1:12 1/1:42:12:5:7:12:92.31%:58:1.3461E-6:60:1:0:1:13 1/1:41:13:4:9:14:92.86%:64:3.7391E-7:29:1:0:1:14 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:15:10:5:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:12:7:5:11:92.31%:58:1.3461E-6:60:1:0:1:13 0/1:44:6:2:4:7:85.71%:26:2.331E-3:60:1:1:0:7 1/1:41:14:7:7:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:16:11:5:17:94.12%:81:7.7134E-9:39:1:0:1:17 0/1:47:7:5:2:8:87.5%:31:6.993E-4:60:1:0:1:8 1/1:38:14:7:7:13:93.33%:69:1.0315E-7:32:1:0:1:15 1/1:46:16:8:8:17:94.12%:81:7.7134E-9:60:1:0:1:17 1/1:41:17:9:8:18:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:49:9:5:4:10:90%:42:5.9538E-5:60:1:0:1:10 1/1:34:13:2:11:14:92.86%:64:3.7391E-7:38:1:0:1:14 1/1:38:11:6:5:10:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:13:7:6:13:92.86%:64:3.7391E-7:60:1:0:1:14 1/1:35:14:8:6:13:100%:76:2.4927E-8:0:0:0:0:14 0/1:37:8:5:3:9:88.89%:36:2.0568E-4:60:1:1:0:9 1/1:44:14:8:6:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:12:6:6:13:92.31%:58:1.3461E-6:60:1:0:1:13 1/1:36:16:5:11:15:94.12%:81:7.7134E-9:32:1:0:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:15:11:4:13:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:16:10:6:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:17:9:8:18:94.44%:86:2.0936E-9:29:1:0:1:18 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:11:5:6:10:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:8:4:4:7:100%:41:7.77E-5:0:0:0:0:8 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:9:4:5:8:100%:46:2.0568E-5:0:0:0:0:9 0/1:37:10:5:5:12:83.33%:44:3.3652E-5:34:2:2:0:12 1/1:32:9:5:4:9:90%:42:5.9538E-5:35:1:0:1:10 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:13:6:7:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:8:2:6:7:100%:41:7.77E-5:0:0:0:0:8 0/1:40:7:4:3:8:87.5%:31:6.993E-4:36:1:1:0:8 1/1:38:11:6:5:12:91.67%:53:4.8074E-6:30:1:1:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:10:7:3:10:90.91%:47:1.7011E-5:33:1:0:1:11 1/1:35:17:7:10:15:94.44%:86:2.0936E-9:29:1:0:1:19 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:9:4:5:10:90%:42:5.9538E-5:30:1:1:0:10 0/1:35:7:3:4:8:87.5%:31:6.993E-4:33:1:0:1:8 1/1:45:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:9:3:6:10:90%:42:5.9538E-5:37:1:0:1:10 1/1:35:20:14:6:19:95.24%:99:4.0873E-11:38:1:0:1:21 1/1:44:9:5:4:10:90%:42:5.9538E-5:60:1:0:1:10 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:14:5:9:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:10:4:6:10:90.91%:47:1.7011E-5:39:1:0:1:11 1/1:44:11:3:8:12:91.67%:53:4.8074E-6:37:1:0:1:12 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:9:4:5:10:90%:42:5.9538E-5:37:1:0:1:11 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:17:10:7:14:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:14:5:9:15:93.33%:69:1.0315E-7:37:1:0:1:15 1/1:37:21:15:6:23:91.3%:99:3.6437E-11:33:2:1:1:23 0/1:39:8:6:2:9:88.89%:36:2.0568E-4:38:1:1:0:9 MTB_anc 2638997 . G A . PASS AC=110;AF=0.367;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2638997G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2638997G>A||||||,A|intergenic_region|MODIFIER|PPE39_Rv2353c-glyS_Rv2357c|gene2402-gene2403|intergenic_region|gene2402-gene2403|||n.2638997G>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:10:5:5:39:25.64%:32:5.0524E-4:38:29:19:10:40 0/1:43:9:4:5:22:40.91%:31:7.0165E-4:44:13:7:6:22 0/1:41:21:14:7:64:32.81%:71:6.6801E-8:39:43:24:19:64 0/1:38:9:5:4:27:33.33%:30:8.8132E-4:39:18:9:9:27 0/1:38:8:6:2:22:36.36%:27:1.8042E-3:42:14:7:7:23 0/0:39:6:5:1:28:21.43%:16:1.1603E-2:37:22:13:9:29 0/1:41:15:9:6:50:30%:50:8.8847E-6:40:35:20:15:52 0/1:37:11:8:3:25:44%:39:1.1933E-4:42:14:6:8:25 0/1:39:12:9:3:32:37.5%:41:6.8751E-5:39:20:11:9:32 0/1:40:10:6:4:38:26.32%:33:4.9525E-4:42:28:16:12:40 0/1:40:13:9:4:24:54.17%:48:1.2938E-5:49:11:3:8:24 0/1:42:16:10:6:48:33.33%:54:3.4048E-6:40:32:20:12:48 0/0:52:3:1:2:15:20%:11:1.1207E-1:48:12:5:7:15 0/1:38:16:9:7:45:35.56%:55:3.0122E-6:40:29:19:10:46 0/1:36:9:6:3:28:32.14%:30:9.1169E-4:38:19:11:8:28 0/0:36:5:5:0:34:14.71%:27:2.6693E-2:38:29:15:14:34 0/0:33:5:3:2:19:26.32%:10:2.3166E-2:39:14:9:5:19 0/0:37:5:3:2:21:23.81%:12:2.3921E-2:38:16:10:6:22 0/1:41:7:5:2:18:38.89%:24:3.8123E-3:38:11:8:3:18 0/1:40:11:6:5:25:44%:39:1.1933E-4:43:14:6:8:27 0/1:38:9:4:5:29:31.03%:30:9.4048E-4:38:20:11:9:30 0/1:39:12:7:5:46:26.09%:39:1.0724E-4:39:34:19:15:46 0/0:39:6:4:2:28:21.43%:16:1.1603E-2:38:22:14:8:31 0/1:38:13:10:3:49:26.53%:43:4.8866E-5:38:36:18:18:49 0/0:39:2:1:1:25:8%:31:2.449E-1:38:23:12:11:26 0/0:42:4:3:1:18:22.22%:10:5.1948E-2:36:14:11:3:18 0/1:40:8:4:4:28:28.57%:26:2.188E-3:37:20:15:5:28 0/1:40:10:8:2:31:32.26%:33:4.1251E-4:39:21:14:7:35 0/0:36:6:4:2:36:16.67%:25:1.2467E-2:38:30:17:13:36 0/0:37:6:1:5:23:26.09%:11:1.0777E-2:40:17:11:6:23 0/1:40:11:5:6:48:22.92%:35:2.5621E-4:37:37:23:14:49 0/0:37:5:1:4:30:16.67%:21:2.6093E-2:37:25:10:15:30 0/0:38:6:5:1:28:21.43%:16:1.1603E-2:43:22:8:14:28 0/1:38:8:4:4:31:25.81%:26:2.3332E-3:41:23:10:13:31 0/1:39:14:9:5:42:33.33%:47:1.6028E-5:38:27:15:12:42 0/1:36:11:5:6:33:33.33%:37:1.8019E-4:36:22:14:8:33 0/1:39:12:6:6:38:31.58%:40:8.7276E-5:40:26:17:9:40 0/1:40:25:14:11:72:34.72%:86:2.3781E-9:40:47:29:18:72 0/1:39:12:7:5:53:22.64%:39:1.2122E-4:38:41:26:15:55 0/1:40:9:3:6:51:17.65%:28:1.3283E-3:41:42:21:21:51 0/1:38:9:5:4:36:25%:29:1.1061E-3:38:27:19:8:37 0/1:38:7:4:3:31:22.58%:22:5.3469E-3:37:24:18:6:31 0/0:37:5:1:4:18:27.78%:8:2.2727E-2:36:13:9:4:18 0/1:37:9:6:3:31:29.03%:30:9.9376E-4:38:22:14:8:31 0/1:38:13:6:7:45:28.89%:43:4.4424E-5:37:32:22:10:46 0/1:37:11:8:3:43:25.58%:36:2.3512E-4:37:32:22:10:43 0/0:38:6:4:2:31:19.35%:20:1.1977E-2:38:25:15:10:32 0/1:37:10:6:4:44:22.73%:32:5.4972E-4:40:34:16:18:44 0/1:36:7:3:4:38:18.42%:22:5.7727E-3:38:31:16:15:38 0/1:40:11:5:6:42:26.19%:36:2.3046E-4:39:31:19:12:44 0/0:43:4:2:2:15:26.67%:8:4.9808E-2:37:11:8:3:16 0/1:37:7:3:4:47:14.89%:22:6.1442E-3:37:40:27:13:49 0/1:45:9:4:5:29:31.03%:30:9.4048E-4:42:20:8:12:29 0/1:40:11:3:8:36:30.56%:37:1.9879E-4:38:25:20:5:37 0/1:37:12:9:3:29:41.38%:42:5.8193E-5:38:17:11:6:31 0/0:36:5:3:2:32:15.62%:24:2.6412E-2:37:27:16:11:33 0/1:37:8:6:2:25:32%:26:2.0146E-3:36:17:13:4:25 0/1:43:9:3:6:30:30%:30:9.678E-4:38:21:16:5:31 0/1:40:17:8:9:55:30.91%:57:1.768E-6:38:38:23:15:55 0/1:38:11:8:3:42:26.19%:36:2.2563E-4:39:30:16:14:44 0/1:39:11:7:4:38:28.95%:36:2.1011E-4:41:27:11:16:38 0/0:37:5:2:3:29:17.24%:22:2.5917E-2:38:24:14:10:29 0/1:38:11:7:4:35:31.43%:37:1.9282E-4:39:24:8:16:35 0/1:39:9:6:3:31:29.03%:30:9.9376E-4:38:22:14:8:31 0/1:39:11:7:4:43:25.58%:36:2.3512E-4:39:32:14:18:43 0/1:40:18:11:7:60:30%:60:8.5119E-7:38:42:25:17:61 0/0:46:5:2:3:29:17.24%:22:2.5917E-2:42:24:14:10:29 0/1:37:12:9:3:34:35.29%:41:7.5302E-5:39:22:9:13:34 0/0:40:6:5:1:26:23.08%:13:1.1309E-2:37:20:14:6:27 0/0:36:4:3:1:18:22.22%:10:5.1948E-2:43:14:10:4:19 0/1:39:8:5:3:35:22.86%:26:2.4931E-3:39:27:16:11:37 0/1:42:17:10:7:42:40.48%:60:9.9678E-7:43:25:13:12:42 0/0:46:3:2:1:19:15.79%:17:1.1486E-1:43:16:9:7:19 0/1:37:7:3:4:43:16.28%:22:5.9972E-3:41:36:18:18:44 0/1:38:13:10:3:55:23.64%:42:5.473E-5:36:42:29:13:55 0/1:38:8:4:4:36:22.22%:25:2.5282E-3:38:28:14:14:36 0/0:38:4:2:2:26:15.38%:20:5.5222E-2:38:22:11:11:27 0/1:43:14:6:8:46:30.43%:47:1.9039E-5:39:32:16:16:47 0/1:37:7:5:2:31:22.58%:22:5.3469E-3:40:24:15:9:34 0/0:39:3:2:1:28:10.71%:28:1.1818E-1:37:25:18:7:29 0/0:37:6:4:2:34:17.65%:23:1.2287E-2:38:28:22:6:34 0/1:39:9:8:1:36:25%:29:1.1061E-3:39:27:16:11:37 0/1:37:14:9:5:45:31.11%:47:1.8462E-5:37:31:19:12:45 0/1:41:13:7:6:39:33.33%:44:3.6837E-5:45:26:16:10:39 0/1:39:10:6:4:30:33.33%:33:3.9851E-4:38:20:14:6:31 0/0:36:5:3:2:36:13.89%:29:2.6944E-2:39:31:16:15:38 0/1:38:11:7:4:28:39.29%:38:1.4422E-4:39:17:12:5:29 0/0:36:4:2:2:19:21.05%:13:5.251E-2:39:15:8:7:19 0/1:37:8:5:3:31:25.81%:26:2.3332E-3:40:23:12:11:31 0/1:39:8:3:5:35:22.86%:26:2.4931E-3:39:27:12:15:36 0/1:36:10:3:7:45:22.22%:32:5.5766E-4:41:35:22:13:48 0/1:41:9:5:4:27:33.33%:30:8.8132E-4:45:18:8:10:28 0/1:40:8:5:3:39:20.51%:25:2.624E-3:37:31:19:12:40 0/1:37:7:6:1:37:18.92%:22:5.721E-3:40:30:17:13:38 0/1:42:12:3:9:56:21.43%:38:1.2642E-4:42:44:24:20:56 0/0:39:2:2:0:18:11.11%:18:2.4286E-1:41:16:6:10:18 0/1:43:16:7:9:39:41.03%:56:2.1927E-6:36:23:16:7:39 0/1:38:8:4:4:34:23.53%:26:2.4562E-3:37:26:11:15:34 0/1:37:10:5:5:30:33.33%:33:3.9851E-4:36:20:11:9:32 0/0:37:6:4:2:37:16.22%:28:1.2549E-2:36:31:22:9:38 0/1:38:8:5:3:37:21.62%:25:2.5617E-3:37:29:16:13:39 0/1:35:9:5:4:35:25.71%:29:1.0857E-3:36:26:13:13:37 0/1:40:10:4:6:27:37.04%:34:3.5253E-4:40:17:10:7:27 0/1:44:7:3:4:25:28%:23:4.8126E-3:36:18:14:4:25 0/1:41:7:1:6:22:31.82%:23:4.4505E-3:35:15:11:4:22 0/1:39:12:8:4:28:42.86%:42:5.0681E-5:39:15:7:8:30 0/0:41:6:4:2:30:20%:18:1.186E-2:36:24:17:7:30 0/1:40:14:7:7:41:34.15%:47:1.6028E-5:41:27:16:11:41 0/1:42:11:7:4:40:27.5%:36:2.2064E-4:36:29:18:11:40 0/1:38:8:6:2:35:22.86%:26:2.4931E-3:39:27:18:9:36 0/1:38:10:6:4:32:31.25%:33:4.259E-4:38:22:11:11:33 0/0:38:5:1:4:22:22.73%:12:2.4248E-2:38:17:13:4:22 0/0:36:2:2:0:13:15.38%:13:2.4E-1:38:11:8:3:14 0/1:38:8:5:3:30:26.67%:26:2.2875E-3:40:22:17:5:30 0/1:37:12:6:6:28:42.86%:42:5.4482E-5:38:16:11:5:30 0/1:35:15:7:8:38:39.47%:52:5.4463E-6:36:23:15:8:38 0/1:38:8:5:3:23:34.78%:27:1.8791E-3:36:15:9:6:24 0/1:41:9:5:4:32:28.12%:29:1.0185E-3:39:23:16:7:32 0/0:36:6:3:3:23:26.09%:11:1.0777E-2:37:17:12:5:26 0/1:37:12:4:8:38:31.58%:40:8.7276E-5:41:26:16:10:39 0/1:39:20:10:10:44:45.45%:72:5.7286E-8:38:24:13:11:44 0/0:37:6:5:1:33:18.18%:23:1.219E-2:39:27:16:11:33 0/1:34:11:3:8:29:37.93%:38:1.5195E-4:36:18:10:8:31 0/0:37:6:3:3:36:16.67%:25:1.2467E-2:37:30:17:13:38 0/1:39:13:5:8:29:44.83%:46:2.1506E-5:35:16:10:6:30 0/1:40:10:4:6:29:34.48%:34:3.8387E-4:35:19:14:5:31 0/1:42:10:4:6:28:35.71%:34:3.6855E-4:37:18:10:8:32 0/0:38:3:1:2:25:12%:25:1.1735E-1:34:22:13:9:26 0/1:45:7:2:5:25:28%:23:4.8126E-3:39:18:10:8:26 0/0:37:6:2:4:30:20%:18:1.186E-2:39:24:16:8:31 0/0:37:4:2:2:21:19.05%:15:5.3471E-2:35:17:11:6:21 0/1:37:8:4:4:28:28.57%:26:2.188E-3:35:20:14:6:31 0/1:37:13:9:4:32:40.62%:45:2.6443E-5:37:19:10:9:33 0/1:37:7:3:4:23:30.43%:23:4.5803E-3:35:16:10:6:23 0/0:37:4:2:2:12:33.33%:4:4.6584E-2:39:8:4:4:15 0/1:43:11:9:2:38:28.95%:36:2.1011E-4:39:27:17:10:38 0/1:38:11:9:2:37:29.73%:36:2.0455E-4:38:26:13:13:37 0/0:38:5:3:2:28:17.86%:19:2.5729E-2:38:23:12:11:29 0/1:37:16:11:5:50:32%:54:3.6584E-6:38:34:16:18:50 0/1:37:13:8:5:45:28.89%:43:4.4424E-5:37:32:16:16:46 0/1:38:15:6:9:36:41.67%:53:4.8188E-6:39:21:14:7:37 0/1:37:9:6:3:28:32.14%:30:9.1169E-4:38:19:12:7:29 0/0:35:5:1:4:25:20%:17:2.5076E-2:38:20:11:9:26 0/1:40:9:4:5:35:25.71%:29:1.0857E-3:44:26:12:14:36 0/1:36:9:5:4:35:25.71%:29:1.0857E-3:42:26:18:8:35 0/1:36:9:5:4:25:36%:30:8.1542E-4:38:16:10:6:25 0/1:39:9:6:3:38:23.68%:29:1.1442E-3:43:29:17:12:38 0/1:40:12:6:6:42:28.57%:40:9.7866E-5:42:30:15:15:45 0/1:44:11:4:7:46:23.91%:36:2.4398E-4:39:34:19:15:47 0/1:36:9:6:3:28:32.14%:30:8.8132E-4:38:18:11:7:28 MTB_anc 2639267 . G GC . PASS AC=1;AF=3.333e-03;AN=300;ANN=GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2639267_2639268insC||||||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2639267_2639268insC||||||,GC|intergenic_region|MODIFIER|PPE39_Rv2353c-glyS_Rv2357c|gene2402-gene2403|intergenic_region|gene2402-gene2403|||n.2639267_2639268insC||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:38:55:35:20:57 0/0:0:0:0:0:33:0%:63:1E0:39:33:24:9:34 0/0:0:0:0:0:80:0%:99:1E0:38:80:56:24:87 0/0:0:0:0:0:33:0%:63:1E0:36:33:25:8:36 0/0:0:0:0:0:54:0%:99:1E0:40:54:36:18:57 0/0:0:0:0:0:37:0%:70:1E0:39:37:25:12:39 0/0:0:0:0:0:49:0%:93:1E0:40:49:29:20:51 0/0:0:0:0:0:22:0%:40:1E0:37:22:18:4:26 0/0:0:0:0:0:60:0%:99:1E0:40:60:41:19:60 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:52 0/0:0:0:0:0:35:0%:67:1E0:38:35:24:11:37 0/0:0:0:0:0:61:0%:99:1E0:37:61:35:26:62 0/0:38:1:1:0:25:4%:38:5E-1:36:24:14:10:27 0/0:0:0:0:0:42:0%:77:1E0:37:42:26:16:45 0/0:0:0:0:0:29:0%:55:1E0:35:29:18:11:30 0/0:0:0:0:0:37:0%:70:1E0:37:37:23:14:42 0/0:0:0:0:0:25:0%:48:1E0:36:25:20:5:27 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:41 0/0:0:0:0:0:19:0%:37:1E0:37:19:13:6:21 0/0:0:0:0:0:37:0%:70:1E0:39:37:26:11:41 0/0:0:0:0:0:41:0%:78:1E0:38:41:27:14:43 0/0:0:0:0:0:44:0%:81:1E0:40:44:28:16:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:60:1:1:0:43:2.33%:70:5E-1:37:42:27:15:49 0/0:0:0:0:0:36:0%:66:1E0:36:36:21:15:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:39 0/0:0:0:0:0:31:0%:59:1E0:35:31:17:14:32 0/0:0:0:0:0:46:0%:85:1E0:37:46:27:19:49 0/0:0:0:0:0:52:0%:96:1E0:38:52:33:19:55 0/0:27:1:1:0:51:1.96%:84:5E-1:37:50:35:15:54 0/0:0:0:0:0:64:0%:99:1E0:36:64:41:23:66 0/0:0:0:0:0:28:0%:51:1E0:37:28:15:13:33 0/0:0:0:0:0:53:0%:99:1E0:41:53:30:23:54 0/0:0:0:0:0:46:0%:85:1E0:38:46:26:20:50 0/0:26:1:1:0:60:1.67%:98:5E-1:40:59:36:23:65 0/0:0:0:0:0:51:0%:97:1E0:36:51:26:25:52 0/0:30:1:1:0:38:2.63%:58:5E-1:35:37:21:16:39 0/0:0:0:0:0:82:0%:99:1E0:38:82:45:37:87 0/0:0:0:0:0:68:0%:99:1E0:38:68:43:25:71 0/0:0:0:0:0:41:0%:78:1E0:39:41:24:17:44 0/0:0:0:0:0:48:0%:89:1E0:35:48:28:20:49 0/0:0:0:0:0:49:0%:93:1E0:39:49:28:21:50 0/0:0:0:0:0:41:0%:78:1E0:37:41:25:16:42 0/0:0:0:0:0:46:0%:85:1E0:36:46:28:18:50 0/0:0:0:0:0:58:0%:99:1E0:37:58:37:21:62 0/0:0:0:0:0:69:0%:99:1E0:38:69:43:26:72 0/0:0:0:0:0:49:0%:93:1E0:37:49:26:23:51 0/0:35:2:2:0:52:3.85%:74:2.4757E-1:37:50:32:18:55 0/0:0:0:0:0:43:0%:82:1E0:40:43:30:13:46 0/0:36:2:1:1:77:2.6%:99:2.4837E-1:39:75:41:34:82 0/0:0:0:0:0:37:0%:70:1E0:41:37:28:9:38 0/0:0:0:0:0:68:0%:99:1E0:37:68:40:28:70 0/0:0:0:0:0:36:0%:66:1E0:35:36:20:16:40 0/0:0:0:0:0:48:0%:89:1E0:39:48:27:21:54 0/0:0:0:0:0:47:0%:89:1E0:38:47:29:18:49 0/0:0:0:0:0:44:0%:81:1E0:37:44:26:18:48 0/0:29:1:0:1:25:4%:38:5E-1:36:24:17:7:30 0/0:0:0:0:0:25:0%:48:1E0:35:25:14:11:26 0/0:0:0:0:0:37:0%:70:1E0:38:37:22:15:41 0/0:0:0:0:0:64:0%:99:1E0:37:64:39:25:73 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:39 0/0:0:0:0:0:45:0%:85:1E0:38:45:27:18:46 0/0:38:1:0:1:32:3.12%:48:5E-1:34:31:20:11:37 0/0:37:1:0:1:39:2.56%:62:5E-1:39:38:29:9:42 0/0:0:0:0:0:55:0%:99:1E0:37:55:34:21:58 0/0:32:1:0:1:91:1.1%:99:5E-1:37:90:54:36:94 0/0:0:0:0:0:45:0%:85:1E0:37:45:28:17:49 0/0:35:1:0:1:63:1.59%:99:5E-1:37:62:40:22:64 0/0:60:1:1:0:42:2.38%:66:5E-1:39:41:19:22:44 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:27 0/0:0:0:0:0:45:0%:85:1E0:37:45:27:18:49 0/0:0:0:0:0:51:0%:97:1E0:44:51:32:19:52 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:29 0/0:0:0:0:0:58:0%:99:1E0:44:58:34:24:58 0/0:0:0:0:0:55:0%:99:1E0:38:55:29:26:59 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:41 0/0:0:0:0:0:42:0%:77:1E0:37:42:23:19:43 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:52 0/0:37:1:1:0:44:2.27%:69:5E-1:37:43:23:20:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:23:7:31 0/0:0:0:0:0:37:0%:70:1E0:37:37:21:16:42 0/0:0:0:0:0:43:0%:82:1E0:38:43:30:13:45 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:47 0/0:49:1:0:1:56:1.79%:91:5E-1:40:55:40:15:58 0/0:38:1:0:1:51:1.96%:84:5E-1:37:50:29:21:56 0/0:0:0:0:0:46:0%:85:1E0:36:46:28:18:55 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:50 0/0:0:0:0:0:31:0%:59:1E0:36:31:22:9:31 0/0:0:0:0:0:44:0%:81:1E0:39:44:33:11:47 0/0:37:1:1:0:50:2%:80:5E-1:39:49:33:16:50 0/0:0:0:0:0:61:0%:99:1E0:37:61:36:25:66 0/0:0:0:0:0:45:0%:85:1E0:41:45:29:16:47 0/0:0:0:0:0:43:0%:82:1E0:35:43:23:20:46 0/0:33:1:1:0:45:2.22%:73:5E-1:39:44:27:17:47 0/0:0:0:0:0:49:0%:93:1E0:37:49:25:24:54 0/0:38:1:0:1:34:2.94%:51:5E-1:37:33:25:8:36 0/0:0:0:0:0:34:0%:62:1E0:36:34:17:17:39 0/0:29:1:1:0:40:2.5%:62:5E-1:36:39:20:19:42 0/0:0:0:0:0:46:0%:85:1E0:37:46:33:13:51 0/1:34:17:7:10:54:30.36%:57:1.768E-6:36:38:23:15:60 0/0:0:0:0:0:41:0%:78:1E0:37:41:22:19:42 0/0:0:0:0:0:44:0%:81:1E0:36:44:27:17:49 0/0:0:0:0:0:37:0%:70:1E0:36:37:26:11:43 0/0:0:0:0:0:22:0%:40:1E0:35:22:18:4:26 0/0:34:1:0:1:27:3.7%:41:5E-1:37:26:18:8:27 0/0:0:0:0:0:46:0%:85:1E0:37:46:31:15:47 0/0:0:0:0:0:42:0%:77:1E0:36:42:26:16:45 0/0:0:0:0:0:57:0%:99:1E0:38:57:36:21:57 0/0:0:0:0:0:45:0%:85:1E0:37:45:29:16:53 0/0:0:0:0:0:42:0%:77:1E0:37:42:29:13:45 0/0:0:0:0:0:46:0%:85:1E0:37:46:25:21:54 0/0:0:0:0:0:32:0%:59:1E0:36:32:19:13:38 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:33 0/0:0:0:0:0:31:0%:59:1E0:35:31:23:8:36 0/0:0:0:0:0:41:0%:78:1E0:35:41:24:17:47 0/0:0:0:0:0:50:0%:92:1E0:33:50:25:25:57 0/0:0:0:0:0:29:0%:55:1E0:36:29:21:8:36 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:40 0/0:0:0:0:0:27:0%:52:1E0:36:27:19:8:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:17:11:32 0/0:0:0:0:0:37:0%:70:1E0:38:37:21:16:41 0/0:0:0:0:0:37:0%:70:1E0:37:37:21:16:40 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:20 0/0:0:0:0:0:40:0%:74:1E0:37:40:27:13:43 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:25 0/0:0:0:0:0:30:0%:55:1E0:37:30:19:11:32 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:20 0/0:26:1:0:1:26:3.85%:38:5E-1:35:25:15:10:30 0/0:0:0:0:0:21:0%:40:1E0:34:21:10:11:24 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:18 0/0:0:0:0:0:18:0%:32:1E0:35:18:12:6:21 0/0:0:0:0:0:26:0%:47:1E0:34:26:11:15:30 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:15 0/0:0:0:0:0:19:0%:37:1E0:33:19:11:8:20 0/0:0:0:0:0:11:0%:22:1E0:40:11:6:5:11 0/0:37:1:1:0:52:1.92%:83:5E-1:37:51:29:22:53 0/0:0:0:0:0:61:0%:99:1E0:35:61:44:17:67 0/0:35:1:1:0:53:1.85%:88:5E-1:36:52:37:15:58 0/0:0:0:0:0:44:0%:81:1E0:36:44:26:18:51 0/0:0:0:0:0:60:0%:99:1E0:36:60:44:16:60 0/0:0:0:0:0:40:0%:74:1E0:37:40:15:25:42 0/0:0:0:0:0:40:0%:74:1E0:36:40:26:14:41 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:43 0/0:38:1:0:1:53:1.89%:88:5E-1:39:52:31:21:57 0/0:0:0:0:0:42:0%:77:1E0:37:42:24:18:44 0/0:0:0:0:0:31:0%:59:1E0:36:31:17:14:34 0/0:0:0:0:0:44:0%:81:1E0:38:44:25:19:51 0/0:0:0:0:0:51:0%:97:1E0:38:51:24:27:55 0/0:0:0:0:0:60:0%:99:1E0:36:60:41:19:67 0/0:0:0:0:0:40:0%:74:1E0:35:40:25:15:43 MTB_anc 2641840 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|zur_Rv2359|gene2405|transcript|Transcript_gene2405|Coding|1/1|c.191G>A|p.Arg64His|191/393|191/393|64/130||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2641840G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.2641840G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:25:16:9:26:96.15%:99:5.4444E-14:37:1:0:1:26 1/1:48:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:51:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 1/1:46:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:54:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:53:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:32:16:16:33:96.97%:99:4.7095E-18:60:1:0:1:35 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:71:36:35:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:46:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:61 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:55:20:35:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:42:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:60:33:27:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 MTB_anc 2645133 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|amiA2_Rv2363|gene2409|transcript|Transcript_gene2409|Coding|1/1|c.814A>G|p.Ile272Val|814/1455|814/1455|272/484||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2645133A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2645133A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:55:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:20:9:11:21:95.24%:99:4.0873E-11:39:1:0:1:21 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:51:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:31:14:17:32:96.88%:99:1.8007E-17:38:1:0:1:33 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:52:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:51:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:44:23:21:45:97.78%:99:3.8097E-26:0:0:0:0:46 1/1:41:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:72:32:40:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:66:35:31:67:98.51%:99:4.5385E-38:33:1:1:0:67 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:35:23:12:36:97.22%:99:8.3613E-20:37:1:0:1:36 1/1:51:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2648402 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv2367c_Rv2367c|gene2413|transcript|Transcript_gene2413|Coding|1/1|c.511C>T|p.Arg171Cys|511/549|511/549|171/182||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2648402G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2648402G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:55 0/0:0:0:0:0:13:0%:25:1E0:43:13:6:7:13 0/0:0:0:0:0:46:0%:85:1E0:47:46:24:22:46 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:38:0%:70:1E0:51:38:19:19:39 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:31 0/0:0:0:0:0:32:0%:59:1E0:51:32:17:15:32 0/0:0:0:0:0:41:0%:78:1E0:49:41:19:22:41 0/0:0:0:0:0:45:0%:85:1E0:45:45:17:28:47 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:43 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:52:0%:96:1E0:43:52:33:19:53 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:21 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:24 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:23 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:24 0/0:38:1:0:1:37:2.7%:59:5E-1:47:36:16:20:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:39:0%:74:1E0:51:39:23:16:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:37:0%:70:1E0:51:37:17:20:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:47 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:18 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:38:0%:70:1E0:41:38:26:12:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:27:13:40 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:45:0%:85:1E0:42:45:27:18:46 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:41 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:32 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:19 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:38 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:20 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:51 0/0:38:1:1:0:37:2.7%:59:5E-1:44:36:17:19:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:32:0%:59:1E0:48:32:10:22:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:44 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:53:0%:99:1E0:50:53:26:27:54 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:14:0%:25:1E0:55:14:9:5:14 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:52:0%:96:1E0:41:52:27:25:53 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:31 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:45 0/0:0:0:0:0:50:0%:92:1E0:42:50:29:21:50 0/0:0:0:0:0:16:0%:29:1E0:47:16:5:11:17 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:42:0%:77:1E0:48:42:24:18:43 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:48 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:48:0%:89:1E0:47:48:27:21:48 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:36 0/0:0:0:0:0:42:0%:77:1E0:45:42:27:15:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 1/1:43:31:15:16:32:96.88%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:38:1:1:0:25:4%:38:5E-1:42:24:13:11:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:38:1:1:0:37:2.7%:59:5E-1:40:36:20:16:39 0/0:0:0:0:0:44:0%:81:1E0:42:44:29:15:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:67:0%:99:1E0:41:67:33:34:68 0/0:0:0:0:0:56:0%:99:1E0:42:56:27:29:56 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:35 0/0:0:0:0:0:54:0%:99:1E0:40:54:29:25:54 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:44 0/0:0:0:0:0:49:0%:93:1E0:40:49:24:25:51 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:46 0/0:0:0:0:0:47:0%:89:1E0:40:47:29:18:48 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:31 0/0:0:0:0:0:46:0%:85:1E0:39:46:19:27:49 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:34 0/0:0:0:0:0:48:0%:89:1E0:41:48:22:26:49 0/0:0:0:0:0:42:0%:77:1E0:39:42:26:16:45 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:46:0%:85:1E0:38:46:27:19:48 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:42:0%:77:1E0:37:42:22:20:42 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:37:0%:70:1E0:42:37:13:24:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:38:42:22:20:42 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:43 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:38 0/0:0:0:0:0:61:0%:99:1E0:43:61:33:28:62 0/0:0:0:0:0:42:0%:77:1E0:41:42:26:16:42 MTB_anc 2650108 . C G . PASS AC=6;AF=0.020;AN=300;ANN=G|missense_variant|MODERATE|Rv2369c_Rv2369c|gene2415|transcript|Transcript_gene2415|Coding|1/1|c.141G>C|p.Lys47Asn|141/303|141/303|47/100||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2650108C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2650108C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:40:38:26:12:40 0/0:0:0:0:0:12:0%:21:1E0:45:12:9:3:12 0/0:0:0:0:0:50:0%:92:1E0:44:50:29:21:50 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:43:0%:82:1E0:47:43:18:25:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:33 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:21 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:45 0/0:60:1:0:1:21:4.76%:31:5E-1:44:20:12:8:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:33:1:0:1:42:2.38%:66:5E-1:42:41:20:21:44 0/0:0:0:0:0:18:0%:32:1E0:49:18:10:8:18 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:19 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:51 0/0:0:0:0:0:56:0%:99:1E0:45:56:31:25:56 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:53:0%:99:1E0:43:53:33:20:53 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:45:0%:85:1E0:40:45:29:16:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:35 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:47 0/0:0:0:0:0:44:0%:81:1E0:44:44:29:15:46 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:16 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:25 0/0:0:0:0:0:52:0%:96:1E0:41:52:30:22:54 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:23:11:35 0/0:0:0:0:0:45:0%:85:1E0:40:45:28:17:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:55:0%:99:1E0:40:55:27:28:55 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:50 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:38:1:1:0:37:2.7%:59:5E-1:43:36:21:15:38 0/0:0:0:0:0:36:0%:66:1E0:47:36:14:22:36 0/0:0:0:0:0:17:0%:33:1E0:45:17:11:6:17 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:43:0%:82:1E0:40:43:27:16:43 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:60:1:0:1:32:3.12%:48:5E-1:40:31:22:9:32 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/0:0:0:0:0:48:0%:89:1E0:39:48:32:16:49 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:24:9:33 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 0/0:34:1:0:1:33:3.03%:52:5E-1:42:32:21:11:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:38 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:23:0%:44:1E0:41:23:17:6:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:38 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:45 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 0/0:0:0:0:0:57:0%:99:1E0:38:57:31:26:57 0/0:0:0:0:0:51:0%:97:1E0:42:51:32:19:54 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:18 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:39 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:40 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:30 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:52 0/0:0:0:0:0:37:0%:70:1E0:41:37:25:12:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:30 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:42 0/0:0:0:0:0:25:0%:48:1E0:40:25:18:7:26 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:33 0/0:0:0:0:0:60:0%:99:1E0:39:60:40:20:61 0/0:33:1:0:1:48:2.08%:76:5E-1:42:47:24:23:48 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:43 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:51 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:53:0%:99:1E0:40:53:29:24:53 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 MTB_anc 2651456 . C T . PASS AC=4;AF=0.013;AN=298;ANN=T|missense_variant|MODERATE|Rv2370c_Rv2370c|gene2416|transcript|Transcript_gene2416|Coding|1/1|c.103G>A|p.Ala35Thr|103/1314|103/1314|35/437||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2651456C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2651456C>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:22 0/0:0:0:0:0:13:0%:25:1E0:49:13:5:8:13 0/0:0:0:0:0:42:0%:77:1E0:46:42:17:25:45 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:22 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:17 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:17 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:26 0/0:0:0:0:0:29:0%:55:1E0:51:29:17:12:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:8:20:31 0/0:0:0:0:0:20:0%:36:1E0:51:20:9:11:21 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:15 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:19 0/0:0:0:0:0:22:0%:40:1E0:42:22:18:4:22 0/0:38:1:1:0:18:5.56%:24:5E-1:48:17:12:5:19 0/0:0:0:0:0:24:0%:44:1E0:47:24:7:17:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:23 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:41 0/0:28:1:1:0:20:5%:27:5E-1:43:19:8:11:22 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:9:24:34 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:59:0%:99:1E0:47:59:34:25:61 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:31 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:29 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:19 0/0:0:0:0:0:48:0%:89:1E0:44:48:20:28:49 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:23 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:36 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:41 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:21 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:54:0%:99:1E0:47:54:31:23:54 0/0:0:0:0:0:29:0%:55:1E0:45:29:8:21:30 0/0:0:0:0:0:46:0%:85:1E0:47:46:21:25:49 0/0:0:0:0:0:15:0%:29:1E0:48:15:9:6:15 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:30 0/0:24:1:0:1:28:3.57%:41:5E-1:50:27:12:15:32 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:16 0/0:0:0:0:0:46:0%:85:1E0:50:46:21:25:46 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:35 0/0:0:0:0:0:13:0%:25:1E0:52:13:5:8:14 0/0:0:0:0:0:20:0%:36:1E0:51:20:9:11:21 0/0:0:0:0:0:20:0%:36:1E0:48:20:8:12:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:19 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:39 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:15:7:22 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:14:0%:25:1E0:42:14:9:5:16 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:24 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:20:0%:36:1E0:44:20:15:5:20 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:33 0/0:60:1:0:1:30:3.33%:44:5E-1:42:29:14:15:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:32 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:0:0:0:0:13:0%:25:1E0:47:13:7:6:13 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:17 0/0:0:0:0:0:23:0%:44:1E0:39:23:9:14:24 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:16:4:21 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:20 0/0:0:0:0:0:12:0%:21:1E0:43:12:2:10:13 0/0:0:0:0:0:16:0%:29:1E0:41:16:7:9:16 0/0:0:0:0:0:15:0%:29:1E0:38:15:10:5:16 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:21 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:0:0:0:0:22:0%:40:1E0:38:22:4:18:24 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:12:23:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:10:21:33 0/0:38:1:0:1:23:4.35%:34:5E-1:45:22:9:13:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:13:26:39 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 MTB_anc 2666250 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|mbtE_Rv2380c|gene2426|transcript|Transcript_gene2426|Coding|1/1|c.866T>G|p.Leu289Trp|866/5049|866/5049|289/1682||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2666250A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2666250A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:12:6:6:13:92.31%:58:1.3461E-6:60:1:0:1:14 1/1:46:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:59:30:29:60:98.33%:99:6.3137E-34:39:1:1:0:62 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:49:32:17:50:98%:99:3.925E-29:0:0:0:0:50 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:26:11:15:27:96.3%:99:1.4382E-14:34:1:1:0:27 1/1:41:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:16:14:31:96.77%:99:6.8754E-17:37:1:0:1:31 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:24:12:12:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:48:15:33:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:35:16:19:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 2667440 . A C . PASS AC=16;AF=0.054;AN=298;ANN=C|missense_variant|MODERATE|mbtD_Rv2381c|gene2427|transcript|Transcript_gene2427|Coding|1/1|c.2830T>G|p.Phe944Val|2830/3015|2830/3015|944/1004||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2667440A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2667440A>C||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:44 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:34 1/1:44:28:17:11:30:93.33%:99:4.194E-15:31:2:1:1:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:56:0%:99:1E0:43:56:23:33:56 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:20 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:23:0%:44:1E0:48:23:9:14:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:47 0/0:0:0:0:0:17:0%:33:1E0:47:17:6:11:17 0/0:38:1:1:0:19:5.26%:28:5E-1:45:18:8:10:20 0/0:0:0:0:0:33:0%:63:1E0:39:33:8:25:35 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:21 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:46 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:25 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:19 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:33 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:7 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:18 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:9:21:32 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:40 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:32 0/0:0:0:0:0:29:0%:55:1E0:50:29:16:13:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:40 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:45:0%:85:1E0:45:45:15:30:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:14:0%:25:1E0:51:14:6:8:14 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:38:0%:70:1E0:47:38:15:23:40 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 1/1:52:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:39 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:26 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:14 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:43:0%:82:1E0:42:43:15:28:43 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:26 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:21 0/0:0:0:0:0:55:0%:99:1E0:41:55:21:34:55 0/0:0:0:0:0:32:0%:59:1E0:40:32:10:22:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:28 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:46 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:19 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:27 0/0:0:0:0:0:11:0%:22:1E0:39:11:4:7:11 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:40 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:43 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:5:13:18 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:29 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:52 0/0:0:0:0:0:53:0%:99:1E0:40:53:27:26:53 0/0:0:0:0:0:26:0%:47:1E0:42:26:7:19:26 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:20 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:41 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:38 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:40 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:32 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:35 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:40 0/0:0:0:0:0:37:0%:70:1E0:38:37:13:24:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:32 0/0:0:0:0:0:35:0%:67:1E0:38:35:14:21:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:41:0%:78:1E0:38:41:19:22:41 0/0:0:0:0:0:47:0%:89:1E0:42:47:17:30:47 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 1/1:40:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:24:0%:44:1E0:40:24:6:18:24 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:51:0%:97:1E0:39:51:26:25:52 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:40 MTB_anc 2671061 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|mbtC_Rv2382c|gene2428|transcript|Transcript_gene2428|Coding|1/1|c.543G>T|p.Ala181Ala|543/1335|543/1335|181/444||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2671061C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2671061C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:52:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:51:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:66:29:37:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:47:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:40:19:21:41:97.56%:99:9.8874E-23:37:1:0:1:41 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:53:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:49:19:30:49:100%:99:3.925E-29:0:0:0:0:52 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:39:20:19:40:97.5%:99:3.8137E-22:39:1:1:0:40 1/1:41:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 MTB_anc 2686157 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|sirA_Rv2391|gene2438|transcript|Transcript_gene2438|Coding|1/1|c.1479A>C|p.Gly493Gly|1479/1692|1479/1692|493/563||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2686157A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2686157A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:47:49:29:20:49 0/0:0:0:0:0:23:0%:44:1E0:50:23:9:14:23 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:49 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:25:14:40 0/0:0:0:0:0:31:0%:59:1E0:50:31:20:11:31 0/0:0:0:0:0:45:0%:85:1E0:48:45:19:26:45 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:22 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:51:28:12:16:29 0/0:0:0:0:0:23:0%:44:1E0:48:23:18:5:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:31:0%:59:1E0:49:31:20:11:31 0/0:0:0:0:0:54:0%:99:1E0:43:54:28:26:54 0/0:0:0:0:0:17:0%:33:1E0:47:17:6:11:19 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:32 0/0:0:0:0:0:23:0%:44:1E0:50:23:14:9:23 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:52:0%:96:1E0:44:52:29:23:52 0/0:0:0:0:0:19:0%:37:1E0:51:19:10:9:19 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:37 0/0:0:0:0:0:21:0%:40:1E0:51:21:6:15:21 0/0:0:0:0:0:24:0%:44:1E0:48:24:18:6:25 0/0:0:0:0:0:32:0%:59:1E0:51:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:37 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:44 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:33:0%:63:1E0:51:33:18:15:33 0/0:0:0:0:0:14:0%:25:1E0:44:14:10:4:14 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:59:0%:99:1E0:51:59:33:26:59 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:41:0%:78:1E0:52:41:21:20:41 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:39 0/0:0:0:0:0:50:0%:92:1E0:46:50:25:25:52 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:8:19:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:47 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:47 0/0:0:0:0:0:43:0%:82:1E0:49:43:20:23:43 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:42 0/0:0:0:0:0:16:0%:29:1E0:43:16:7:9:17 0/0:0:0:0:0:43:0%:82:1E0:45:43:25:18:43 0/0:0:0:0:0:40:0%:74:1E0:49:40:16:24:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:50:0%:92:1E0:49:50:24:26:50 0/0:0:0:0:0:16:0%:29:1E0:49:16:9:7:16 0/0:0:0:0:0:37:0%:70:1E0:44:37:10:27:38 0/0:0:0:0:0:39:0%:74:1E0:49:39:22:17:39 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:21:0%:40:1E0:51:21:15:6:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:24 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:19:7:26 0/0:0:0:0:0:50:0%:92:1E0:44:50:18:32:50 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:30 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:26 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:43:0%:82:1E0:49:43:22:21:43 0/0:0:0:0:0:24:0%:44:1E0:54:24:9:15:24 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:53 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:28 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:28 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:34 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:39 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:43 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:28 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:19 0/0:0:0:0:0:73:0%:99:1E0:42:73:39:34:73 0/0:0:0:0:0:62:0%:99:1E0:41:62:37:25:64 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:28:16:45 0/0:0:0:0:0:54:0%:99:1E0:40:54:24:30:55 0/0:0:0:0:0:38:0%:70:1E0:37:38:20:18:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:29:18:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:42 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:48 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:56:0%:99:1E0:42:56:26:30:58 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:42 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:48:0%:89:1E0:39:48:18:30:49 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:27:16:43 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:44:0%:81:1E0:39:44:24:20:44 0/0:0:0:0:0:17:0%:33:1E0:49:17:12:5:17 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 MTB_anc 2689715 . G C . PASS AC=298;AF=1.00;AN=298;ANN=C|missense_variant|MODERATE|ggtB_Rv2394|gene2441|transcript|Transcript_gene2441|Coding|1/1|c.1706G>C|p.Gly569Ala|1706/1932|1706/1932|569/643||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2689715G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2689715G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:40:18:10:8:19:94.74%:92:5.6585E-10:38:1:1:0:20 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:20:12:8:21:95.24%:99:7.2544E-12:0:0:0:0:22 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:45:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:44:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:20 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:31:12:19:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:21:11:10:22:95.45%:99:1.0931E-11:37:1:0:1:23 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 MTB_anc 2691713 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2395_Rv2395|gene2442|transcript|Transcript_gene2442|Coding|1/1|c.1642C>T|p.Pro548Ser|1642/2004|1642/2004|548/667||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2691713C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2691713C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:54:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:48:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:52:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:50 1/1:38:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:36:63:27:36:63:100%:99:1.657E-37:0:0:0:0:64 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:42 MTB_anc 2693377 . C T . PASS AC=256;AF=1.00;AN=256;ANN=T|synonymous_variant|LOW|PE_PGRS41_Rv2396|gene2446|transcript|Transcript_gene2446|Coding|1/1|c.579C>T|p.Ala193Ala|579/1086|579/1086|193/361||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2693377C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2693377C>T||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:10:4:6:11:90.91%:52:5.4125E-6:0:0:0:0:12 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:28 1/1:36:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:13 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:15 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:34:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:38:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:35:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:35:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 2694081 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|cysA1_Rv2397c|gene2447|transcript|Transcript_gene2447|Coding|1/1|c.884C>T|p.Ala295Val|884/1056|884/1056|295/351||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2694081G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2694081G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:13:0%:25:1E0:48:13:6:7:14 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:13:0%:25:1E0:45:13:9:4:14 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:24 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:22 0/0:60:1:0:1:30:3.33%:44:5E-1:43:29:16:13:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:18:0%:32:1E0:43:18:6:12:18 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:42 0/0:0:0:0:0:13:0%:25:1E0:40:13:5:8:13 0/0:0:0:0:0:52:0%:96:1E0:43:52:22:30:53 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:36 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:19 0/0:0:0:0:0:18:0%:32:1E0:47:18:6:12:18 0/0:0:0:0:0:13:0%:25:1E0:47:13:6:7:13 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:17 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:36 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:23 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:8:18:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:50:0%:92:1E0:47:50:20:30:51 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:43:0%:82:1E0:44:43:15:28:44 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:7:19:26 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:40:33:10:23:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:45 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:47 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:26 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:41 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:45:39:13:26:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:35:1:0:1:22:4.55%:31:5E-1:44:21:6:15:22 0/0:0:0:0:0:44:0%:81:1E0:46:44:24:20:45 0/0:30:1:0:1:25:4%:38:5E-1:47:24:13:11:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:29 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:47:0%:89:1E0:42:47:12:35:49 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:43 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:17:0%:33:1E0:48:17:7:10:17 0/0:0:0:0:0:8:0%:14:1E0:45:8:7:1:8 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:42:0%:77:1E0:45:42:14:28:43 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:23 0/0:0:0:0:0:19:0%:37:1E0:43:19:4:15:21 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:35 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:36 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:48 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:19:0%:37:1E0:50:19:6:13:19 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:25 0/0:0:0:0:0:22:0%:40:1E0:50:22:7:15:23 0/0:0:0:0:0:39:0%:74:1E0:47:39:16:23:39 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:19 0/1:39:36:14:22:44:81.82%:99:2.867E-17:43:8:6:2:44 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:20 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:39 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:44 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:34 0/0:0:0:0:0:24:0%:44:1E0:40:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:39:33:24:9:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:39 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:33 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:21 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:35 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:14:28:43 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:25:11:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:14:0%:25:1E0:41:14:7:7:16 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:30 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:7:19:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:47:0%:89:1E0:41:47:29:18:47 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:28 MTB_anc 2700239 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2402_Rv2402|gene2453|transcript|Transcript_gene2453|Coding|1/1|c.1711G>A|p.Val571Met|1711/1929|1711/1929|571/642||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2700239G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2700239G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:53:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:53:17:36:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:31:16:15:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:52:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:47:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:51:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:49:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:63:31:32:63:100%:99:1.657E-37:0:0:0:0:65 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:53:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:52:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:56 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:53:16:37:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 2704884 . A ACAGCGACCATATCGCCGAGCT,ACAGCGAC . PASS AC=151,1;AF=0.503,3.333e-03;AN=300;LOF=(Rv2407_Rv2407|gene2458|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:39:16:16:43:72.73%:99:5.4567E-19:0:0:0:0:45 0/1:52:7:3:15:66.67%:52:5.4125E-6:0:0:0:0:15 0/1:45:14:16:38:76.92%:99:6.8754E-17:33:1:1:0:39 0/1:46:3:12:22:68.18%:75:2.8282E-8:37:1:1:0:22 0/1:43:12:7:23:82.61%:99:2.8292E-11:0:0:0:0:23 0/1:44:9:5:16:82.35%:76:2.4927E-8:0:0:0:0:17 0/1:40:6:7:23:52%:60:8.7675E-7:34:2:1:1:25 0/1:41:8:9:22:77.27%:86:2.0936E-9:29:1:0:1:22 0/1:42:9:8:21:73.91%:82:5.9414E-9:29:2:1:1:23 0/1:43:6:8:18:73.68%:76:2.4927E-8:0:0:0:0:19 0/1:40:6:5:19:57.89%:58:1.4176E-6:0:0:0:0:19 0/1:41:9:10:30:61.29%:98:1.5234E-10:33:1:1:0:31 0/1:42:5:6:15:73.33%:58:1.4176E-6:0:0:0:0:15 0/1:43:11:7:28:62.07%:99:1.1019E-10:0:0:0:0:29 0/1:40:4:9:17:76.47%:70:9.6148E-8:0:0:0:0:18 0/1:47:11:10:26:80.77%:99:1.8578E-12:0:0:0:0:26 0/1:42:7:9:28:57.14%:87:1.6637E-9:0:0:0:0:28 0/1:45:6:10:25:64%:87:1.6637E-9:0:0:0:0:26 0/1:43:5:5:12:83.33%:52:5.4125E-6:0:0:0:0:12 0/1:43:10:4:22:60.87%:76:2.4927E-8:0:0:0:0:23 0/1:45:9:10:29:63.33%:98:1.5234E-10:33:1:1:0:31 0/1:39:12:15:34:69.23%:99:3.7915E-15:35:1:0:1:39 0/1:45:9:9:29:62.07%:84:3.7603E-9:36:3:2:1:29 0/1:44:12:19:38:81.58%:99:1.8007E-17:24:1:1:0:38 0/1:39:11:13:34:66.67%:99:2.0568E-13:37:1:1:0:36 0/1:41:7:9:20:80%:87:1.6637E-9:0:0:0:0:20 0/1:40:8:5:17:72.22%:70:9.6148E-8:0:0:0:0:18 0/1:45:10:6:24:66.67%:81:7.7134E-9:32:1:0:1:24 0/1:45:8:7:17:83.33%:81:6.4467E-9:0:0:0:0:18 0/1:42:10:8:21:81.82%:99:1.1019E-10:0:0:0:0:22 0/1:43:10:6:28:57.14%:81:7.7134E-9:33:1:1:0:28 0/1:41:5:6:16:61.11%:53:4.8074E-6:35:1:1:0:18 0/1:44:9:8:21:80.95%:93:4.2852E-10:0:0:0:0:21 0/1:44:9:7:21:69.57%:81:7.7134E-9:37:1:1:0:23 0/1:47:6:13:23:82.61%:99:2.8292E-11:0:0:0:0:23 0/1:46:17:10:37:72.97%:99:5.1363E-16:0:0:0:0:37 0/1:38:14:13:31:87.1%:99:3.7915E-15:38:1:0:1:31 0/1:45:13:22:50:67.31%:99:1.5466E-18:34:3:0:3:53 0/1:47:8:19:32:81.82%:99:3.7915E-15:29:1:0:1:33 0/1:43:13:15:41:68.29%:99:4.194E-15:35:2:1:1:41 0/1:40:19:11:38:75%:99:8.4556E-18:0:0:0:0:40 0/1:37:12:7:26:73.08%:93:4.7003E-10:49:2:2:0:26 0/1:42:4:5:14:64.29%:46:2.0568E-5:0:0:0:0:15 0/1:45:6:9:24:62.5%:71:7.3277E-8:33:2:1:1:24 0/1:40:9:9:27:62.07%:87:1.6758E-9:31:2:1:1:29 0/1:45:12:14:35:74.29%:99:1.4382E-14:37:1:1:0:36 0/1:47:11:4:23:62.5%:81:6.4467E-9:0:0:0:0:24 0/1:44:19:13:45:68.09%:99:5.4567E-19:0:0:0:0:47 0/1:43:11:16:41:65.85%:99:1.5465E-14:36:2:0:2:41 0/1:45:7:8:27:55.56%:81:6.4467E-9:0:0:0:0:27 0/1:44:6:4:18:55.56%:47:1.7011E-5:34:1:0:1:18 0/1:39:14:11:31:75.76%:99:5.4444E-14:38:1:0:1:33 0/1:41:7:8:17:83.33%:81:6.4467E-9:0:0:0:0:18 0/1:44:11:11:26:81.48%:99:2.9149E-12:37:1:1:0:27 0/1:42:7:8:20:71.43%:75:2.8282E-8:38:1:1:0:23 0/1:40:11:22:43:76.74%:99:1.2301E-18:39:1:0:1:44 0/1:43:10:12:28:75.86%:99:2.9149E-12:48:1:0:1:30 0/1:42:5:10:19:78.95%:81:6.4467E-9:0:0:0:0:19 0/1:41:18:14:42:74.42%:99:5.4567E-19:0:0:0:0:45 0/1:46:9:9:27:66.67%:92:5.6585E-10:34:1:0:1:27 0/1:46:7:12:29:63.33%:93:4.7003E-10:35:2:1:1:30 0/1:41:12:14:36:70.27%:99:2.0165E-15:0:0:0:0:38 0/1:42:15:11:33:76.47%:99:5.6872E-14:34:2:1:1:35 0/1:43:5:10:18:83.33%:75:2.8282E-8:29:1:0:1:18 0/1:41:9:10:28:67.86%:77:1.6265E-8:42:9:2:7:28 0/1:43:6:14:34:58.82%:99:4.0873E-11:38:1:1:0:34 0/1:48:7:11:22:81.82%:99:1.1019E-10:0:0:0:0:22 0/1:44:6:12:32:56.25%:87:1.6758E-9:29:2:1:1:33 0/1:45:6:5:19:57.89%:53:4.8074E-6:60:1:0:1:19 0/1:44:4:11:21:65.22%:75:2.8282E-8:39:1:0:1:23 0/1:43:8:13:28:75%:99:1.8578E-12:0:0:0:0:28 0/1:46:6:4:16:58.82%:44:3.3652E-5:48:2:1:1:17 0/1:35:6:4:10:71.43%:47:1.7011E-5:33:1:1:0:14 0/1:43:11:14:37:64.1%:99:7.9107E-15:0:0:0:0:39 0/1:44:14:9:30:67.65%:99:1.2146E-13:0:0:0:0:34 0/1:42:3:11:21:63.64%:76:2.4927E-8:0:0:0:0:23 0/1:43:16:10:31:78.79%:99:2.0165E-15:0:0:0:0:33 0/1:48:12:9:26:77.78%:99:1.8578E-12:0:0:0:0:27 0/1:43:16:5:30:70%:99:1.8578E-12:0:0:0:0:30 0/1:39:10:12:27:75.86%:99:2.9149E-12:38:1:0:1:29 0/1:45:4:9:14:86.67%:70:9.6148E-8:0:0:0:0:16 0/1:40:13:22:44:76.09%:99:8.9137E-21:0:0:0:0:46 0/1:39:15:11:34:72.22%:99:2.0165E-15:0:0:0:0:36 0/1:46:14:11:33:75.76%:99:7.9107E-15:0:0:0:0:33 0/1:41:11:13:31:72.73%:99:3.101E-14:0:0:0:0:34 0/1:40:10:10:24:71.43%:99:7.2544E-12:0:0:0:0:28 0/1:40:11:9:26:71.43%:99:7.2544E-12:0:0:0:0:29 0/1:50:4:8:16:75%:58:1.3461E-6:32:1:1:0:16 0/1:41:17:10:36:72.97%:99:1.5465E-14:36:2:0:2:37 0/1:40:8:11:22:82.61%:98:1.5234E-10:38:1:1:0:24 1/1:43:13:10:25:92%:99:7.7525E-13:37:1:1:0:25 0/1:52:3:8:14:78.57%:53:4.8074E-6:37:1:1:0:14 0/1:40:18:17:37:87.5%:99:8.9137E-21:0:0:0:0:40 0/1:44:13:11:34:70.59%:99:3.101E-14:0:0:0:0:34 0/1:41:12:20:42:74.42%:99:4.7095E-18:34:1:1:0:43 0/1:44:13:5:25:69.23%:99:1.1019E-10:0:0:0:0:26 0/1:39:5:6:18:52.38%:58:1.4176E-6:0:0:0:0:22 0/1:38:11:8:24:79.17%:99:2.8292E-11:0:0:0:0:24 0/1:41:10:8:28:64.29%:99:1.1019E-10:0:0:0:0:28 0/1:42:10:7:22:73.91%:86:2.0936E-9:33:1:0:1:23 0/1:43:4:8:22:52.17%:64:3.698E-7:0:0:0:0:23 0/1:45:10:13:30:76.67%:99:1.2146E-13:0:0:0:0:30 0/1:42:6:9:27:51.72%:71:7.3277E-8:36:2:2:0:30 0/1:39:11:9:26:76.92%:99:7.2544E-12:0:0:0:0:27 0/1:44:7:2:15:52.94%:42:5.9538E-5:37:1:0:1:17 0/1:43:10:9:25:76%:99:2.8292E-11:0:0:0:0:25 0/1:44:9:11:24:83.33%:99:7.2544E-12:0:0:0:0:24 0/1:41:14:13:31:81.82%:99:5.1363E-16:0:0:0:0:33 0/1:44:19:12:35:88.57%:99:2.1486E-18:0:0:0:0:35 0/1:44:8:11:28:67.86%:99:2.8292E-11:0:0:0:0:28 0/1:42:16:13:34:85.29%:99:3.3259E-17:0:0:0:0:34 0/1:43:11:11:25:88%:99:4.7526E-13:0:0:0:0:25 0/1:33:5:10:25:55.56%:75:2.8282E-8:32:1:0:1:27 0/1:40:11:12:29:76.67%:99:1.2146E-13:0:0:0:0:30 0/1:37:8:9:22:73.91%:86:2.0936E-9:32:1:0:1:23 0/1:40:10:8:30:56.25%:99:1.1019E-10:0:0:0:0:32 0/1:36:8:6:19:70%:76:2.4927E-8:0:0:0:0:20 0/1:44:13:13:34:74.29%:99:1.4382E-14:32:1:0:1:35 0/1:42:4:6:14:71.43%:47:1.7011E-5:33:1:1:0:14 0/1:40:14:18:48:66.67%:99:2.2142E-17:49:2:0:2:48 0/1:41:22:15:43:84.09%:99:5.7269E-22:0:0:0:0:44 0/1:46:13:7:26:71.43%:99:7.2544E-12:0:0:0:0:28 0/1:37:4:6:15:58.82%:52:5.4125E-6:0:0:0:0:17 0/1:36:3:11:23:51.85%:76:2.4927E-8:0:0:0:0:27 0/1:35:9:9:24:66.67%:99:1.1019E-10:0:0:0:0:28 0/1:37:11:8:31:57.58%:99:2.8292E-11:0:0:0:0:34 0/1:36:6:12:29:60%:99:1.1019E-10:0:0:0:0:30 0/1:37:13:9:27:73.33%:99:2.9149E-12:33:1:1:0:30 0/1:34:9:13:25:75.86%:95:2.7763E-10:33:7:5:2:30 0/1:43:13:5:23:75%:99:1.1019E-10:0:0:0:0:26 0/1:41:13:7:28:66.67%:99:7.2544E-12:0:0:0:0:30 0/1:37:11:12:33:63.89%:99:7.7525E-13:26:1:1:0:36 0/1:34:6:7:18:59.09%:64:3.7391E-7:38:1:1:0:22 0/1:36:16:13:32:80.56%:99:3.3259E-17:0:0:0:0:36 0/1:38:3:8:17:64.71%:43:4.3258E-5:32:6:4:2:18 0/1:40:6:9:22:65.22%:75:2.8282E-8:60:1:0:1:23 0/1:36:16:10:40:63.41%:99:5.6872E-14:37:2:2:0:43 0/2:46:5:5:17:58.82%:52:5.4125E-6:0:0:0:0:17 0/1:43:8:3:23:47.83%:58:1.4176E-6:0:0:0:0:23 0/1:38:14:14:38:71.79%:99:1.2857E-14:32:3:2:1:39 0/1:36:10:9:26:67.86%:99:2.8292E-11:0:0:0:0:28 0/1:38:4:9:17:72.22%:60:8.7675E-7:32:2:0:2:18 0/1:42:7:5:22:52.17%:55:2.9913E-6:28:2:1:1:23 0/1:47:15:16:39:79.49%:99:2.7308E-16:34:3:2:1:39 0/1:41:10:14:32:75%:99:3.101E-14:0:0:0:0:33 1/1:40:10:7:18:94.44%:93:4.2852E-10:0:0:0:0:18 0/1:40:11:12:32:71.88%:98:1.3219E-10:36:8:4:4:32 0/1:43:19:15:41:80.95%:99:3.2089E-19:33:1:0:1:42 0/1:38:9:9:32:52.94%:87:1.6758E-9:41:2:1:1:34 0/1:38:6:9:23:62.5%:75:2.8282E-8:33:1:1:0:24 MTB_anc 2704886 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv2407_Rv2407|gene2458|transcript|Transcript_gene2458|Coding|1/1|c.190G>A|p.Gly64Ser|190/822|190/822|64/273||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2704886G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2704886G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:44 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:14 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:41 0/0:37:1:1:0:20:5%:27:5E-1:43:19:6:13:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:19 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:22 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:14 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:16 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:18:0%:32:1E0:46:18:6:12:18 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:16 0/0:0:0:0:0:19:0%:37:1E0:44:19:14:5:19 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:36 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:23 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:31 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:16 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:21 0/0:34:1:1:0:20:5%:27:5E-1:42:19:8:11:21 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:39 0/0:37:2:1:1:50:4%:70:2.4747E-1:42:48:18:30:52 0/0:0:0:0:0:40:0%:74:1E0:42:40:12:28:42 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:0:0:0:0:25:0%:48:1E0:37:25:16:9:25 0/0:0:0:0:0:13:0%:25:1E0:43:13:4:9:13 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:37:1:1:0:24:4.17%:34:5E-1:47:23:14:9:24 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:47 0/0:36:2:0:2:36:5.56%:47:2.4648E-1:41:34:13:21:37 0/0:0:0:0:0:22:0%:40:1E0:41:22:7:15:22 0/0:0:0:0:0:14:0%:25:1E0:45:14:7:7:14 0/0:38:1:0:1:38:2.63%:58:5E-1:41:37:20:17:39 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:37:1:1:0:27:3.7%:41:5E-1:44:26:13:13:28 0/0:0:0:0:0:19:0%:37:1E0:45:19:5:14:21 0/0:32:1:0:1:37:2.7%:59:5E-1:39:36:13:23:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:20 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:38:1:0:1:29:3.45%:45:5E-1:44:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/0:37:1:1:0:32:3.12%:48:5E-1:41:31:16:15:32 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:20 0/1:40:8:1:7:31:25.81%:26:2.2875E-3:42:22:11:11:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:14:0%:25:1E0:44:14:7:7:14 0/0:0:0:0:0:18:0%:32:1E0:46:18:4:14:19 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:18 0/0:33:1:1:0:13:7.69%:18:5E-1:41:12:6:6:15 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:28 0/0:0:0:0:0:14:0%:25:1E0:41:14:4:10:15 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:29 0/0:38:1:0:1:25:4%:38:5E-1:42:24:11:13:25 0/0:0:0:0:0:19:0%:37:1E0:44:19:5:14:19 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:41 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:38:1:1:0:32:3.12%:48:5E-1:42:31:15:16:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:27 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:17 0/0:36:2:0:2:39:5.13%:54:2.4675E-1:44:37:20:17:40 0/0:37:1:1:0:29:3.45%:45:5E-1:43:28:11:17:29 0/0:38:1:1:0:29:3.45%:45:5E-1:42:28:15:13:31 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:21 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:14:25:41 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:17:0%:33:1E0:39:17:10:7:18 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:27 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:24 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:17 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:27 0/0:0:0:0:0:14:0%:25:1E0:40:14:9:5:14 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:21 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:23 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:19 0/0:34:1:0:1:39:2.56%:62:5E-1:43:38:17:21:41 0/0:0:0:0:0:47:0%:89:1E0:41:47:28:19:48 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:23 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:17 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:28 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:24 0/0:0:0:0:0:34:0%:62:1E0:37:34:20:14:35 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:31 0/0:35:5:3:2:37:13.51%:32:2.706E-2:38:32:16:16:40 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:30 0/0:0:0:0:0:30:0%:55:1E0:37:30:21:9:32 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:32 0/0:0:0:0:0:25:0%:48:1E0:36:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:38:35:20:15:37 0/0:35:4:3:1:18:22.22%:10:5.1948E-2:39:14:4:10:19 0/0:0:0:0:0:20:0%:36:1E0:42:20:6:14:20 0/0:38:1:0:1:33:3.03%:52:5E-1:37:32:23:9:36 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:20 0/0:0:0:0:0:44:0%:81:1E0:37:44:24:20:45 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:22 0/0:37:2:2:0:38:5.26%:50:2.4667E-1:45:36:17:19:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:33 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:39:6:2:4:36:16.67%:25:1.2467E-2:38:30:14:16:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:31 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:22 MTB_anc 2705112 . T G . PASS AC=4;AF=0.013;AN=300;ANN=G|missense_variant|MODERATE|Rv2407_Rv2407|gene2458|transcript|Transcript_gene2458|Coding|1/1|c.416T>G|p.Ile139Ser|416/822|416/822|139/273||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2705112T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2705112T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:42 0/0:0:0:0:0:29:0%:55:1E0:51:29:13:16:30 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:51 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:33:0%:63:1E0:50:33:19:14:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:24 0/0:0:0:0:0:28:0%:51:1E0:48:28:10:18:28 0/0:0:0:0:0:32:0%:59:1E0:49:32:9:23:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:26 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:42 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:23 0/0:0:0:0:0:58:0%:99:1E0:47:58:29:29:60 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:22 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:7:19:26 0/0:0:0:0:0:16:0%:29:1E0:44:16:11:5:16 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:33 0/0:0:0:0:0:38:0%:70:1E0:45:38:13:25:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:16:26:42 0/0:0:0:0:0:57:0%:99:1E0:47:57:27:30:57 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:43 0/0:0:0:0:0:50:0%:92:1E0:48:50:24:26:51 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:32 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:43 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:19 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:25 0/0:0:0:0:0:51:0%:97:1E0:42:51:22:29:52 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:35:0%:67:1E0:49:35:16:19:37 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:43 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:20 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:21 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:36 0/0:0:0:0:0:34:0%:62:1E0:51:34:21:13:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:48 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:33 0/0:38:1:0:1:30:3.33%:44:5E-1:48:29:14:15:30 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:25 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:39 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:49:36:23:13:36 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:41 0/0:0:0:0:0:17:0%:33:1E0:44:17:5:12:18 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:33 0/0:0:0:0:0:33:0%:63:1E0:51:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:44:0%:81:1E0:47:44:25:19:44 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:33 0/0:0:0:0:0:25:0%:48:1E0:51:25:15:10:25 0/0:0:0:0:0:40:0%:74:1E0:48:40:20:20:40 0/0:0:0:0:0:28:0%:51:1E0:51:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:47:30:9:21:31 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:33 0/0:0:0:0:0:34:0%:62:1E0:47:34:12:22:36 0/0:0:0:0:0:46:0%:85:1E0:45:46:18:28:46 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:38:0%:70:1E0:45:38:13:25:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:27 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:39 0/0:0:0:0:0:38:0%:70:1E0:46:38:25:13:38 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:33 0/0:0:0:0:0:49:0%:93:1E0:40:49:21:28:51 1/1:38:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:43 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:52 0/0:0:0:0:0:63:0%:99:1E0:44:63:30:33:65 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 0/0:0:0:0:0:43:0%:82:1E0:41:43:25:18:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:57:0%:99:1E0:41:57:38:19:60 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:46 0/0:0:0:0:0:47:0%:89:1E0:38:47:22:25:50 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:46 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:42 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:46 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:50 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:30 0/0:0:0:0:0:45:0%:85:1E0:39:45:25:20:48 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:31 0/0:0:0:0:0:61:0%:99:1E0:38:61:28:33:63 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:31 0/0:0:0:0:0:52:0%:96:1E0:41:52:28:24:54 0/0:0:0:0:0:54:0%:99:1E0:42:54:24:30:57 0/0:0:0:0:0:42:0%:77:1E0:42:42:14:28:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:60:1:0:1:37:2.7%:59:5E-1:43:36:17:19:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:42 MTB_anc 2706379 . C T . PASS AC=16;AF=0.053;AN=300;ANN=T|synonymous_variant|LOW|PE24_Rv2408|gene2459|transcript|Transcript_gene2459|Coding|1/1|c.618C>T|p.Ser206Ser|618/975|618/975|206/324||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2706379C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2706379C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:33:0%:63:1E0:43:33:23:10:34 0/0:0:0:0:0:21:0%:40:1E0:51:21:12:9:21 0/0:0:0:0:0:65:0%:99:1E0:45:65:36:29:65 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:28:11:41 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:36 0/0:0:0:0:0:33:0%:63:1E0:50:33:22:11:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:46:0%:85:1E0:45:46:18:28:47 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:42 0/0:0:0:0:0:49:0%:93:1E0:43:49:23:26:51 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:19 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 0/0:0:0:0:0:40:0%:74:1E0:45:40:25:15:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:24:11:35 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:26:8:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:36 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:45 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:30 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:48 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:39:0%:74:1E0:45:39:24:15:40 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:43 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:36:0%:66:1E0:46:36:23:13:36 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:48 0/0:0:0:0:0:55:0%:99:1E0:48:55:30:25:55 0/0:60:1:1:0:36:2.78%:55:5E-1:46:35:20:15:36 0/0:0:0:0:0:55:0%:99:1E0:46:55:27:28:57 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:49 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:29 0/0:0:0:0:0:38:0%:70:1E0:46:38:23:15:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:52:0%:96:1E0:46:52:26:26:52 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:38 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:41 0/0:0:0:0:0:22:0%:40:1E0:50:22:9:13:22 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:42 0/0:0:0:0:0:14:0%:25:1E0:42:14:8:6:14 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:43:0%:82:1E0:43:43:28:15:43 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 0/0:0:0:0:0:46:0%:85:1E0:48:46:25:21:46 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:25:0%:48:1E0:52:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:62:0%:99:1E0:46:62:31:31:63 0/0:60:1:0:1:31:3.23%:48:5E-1:45:30:17:13:32 0/0:0:0:0:0:56:0%:99:1E0:46:56:27:29:57 0/0:0:0:0:0:30:0%:55:1E0:46:30:21:9:31 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:17 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:16:0%:29:1E0:44:16:6:10:16 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:44 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:19 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:25:6:31 0/0:39:1:1:0:31:3.23%:48:5E-1:42:30:20:10:31 0/0:0:0:0:0:50:0%:92:1E0:43:50:32:18:50 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:35 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:28:13:43 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:35 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:23 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:21:17:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:50:0%:92:1E0:43:50:26:24:50 0/0:0:0:0:0:27:0%:52:1E0:43:27:19:8:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:23:9:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:40 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:34 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:43:0%:82:1E0:42:43:29:14:43 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:30:14:44 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:31 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:28:17:45 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:41 0/0:0:0:0:0:44:0%:81:1E0:42:44:29:15:46 0/0:0:0:0:0:19:0%:37:1E0:45:19:6:13:20 0/0:0:0:0:0:56:0%:99:1E0:42:56:29:27:58 0/0:0:0:0:0:53:0%:99:1E0:46:53:29:24:53 1/1:40:21:11:10:22:95.45%:99:1.0931E-11:34:1:0:1:23 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:47 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:38 0/0:0:0:0:0:49:0%:93:1E0:39:49:29:20:50 0/0:0:0:0:0:56:0%:99:1E0:41:56:33:23:57 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:36 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:35 0/0:0:0:0:0:50:0%:92:1E0:43:50:29:21:52 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:53:0%:99:1E0:40:53:30:23:55 0/0:39:1:0:1:40:2.5%:62:5E-1:40:39:21:18:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:23:10:35 0/0:37:1:1:0:41:2.44%:66:5E-1:42:40:23:17:45 0/0:0:0:0:0:37:0%:70:1E0:45:37:26:11:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:28 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:40 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:56:0%:99:1E0:44:56:34:22:57 0/0:0:0:0:0:52:0%:96:1E0:45:52:32:20:53 0/0:0:0:0:0:33:0%:63:1E0:40:33:22:11:33 MTB_anc 2709795 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2411c_Rv2411c|gene2462|transcript|Transcript_gene2462|Coding|1/1|c.171C>T|p.Ala57Ala|171/1656|171/1656|57/551||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2709795G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2709795G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:51:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:64:23:41:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:44:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:63:28:35:63:100%:99:1.657E-37:0:0:0:0:66 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 2712913 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2415c_Rv2415c|gene2466|transcript|Transcript_gene2466|Coding|1/1|c.872T>G|p.Leu291Arg|872/894|872/894|291/297||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2712913A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2712913A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:13:8:5:14:92.86%:64:3.7391E-7:37:1:0:1:14 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:55:36:19:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:43:33:10:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:36:20:16:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:24:13:38:97.37%:99:5.6582E-21:60:1:0:1:39 1/1:48:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:35:29:6:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:35:29:6:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 MTB_anc 2718519 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|nadD_Rv2421c|gene2472|transcript|Transcript_gene2472|Coding|1/1|c.290C>T|p.Thr97Ile|290/636|290/636|97/211||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2718519G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2718519G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:38:0%:70:1E0:47:38:18:20:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:35:0%:67:1E0:50:35:15:20:35 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:32:0%:59:1E0:49:32:21:11:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:20:0%:36:1E0:50:20:12:8:20 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:51 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:31 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:24 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:51:0%:97:1E0:43:51:31:20:53 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:38 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:28 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:26 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:36 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:49:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:43 0/0:0:0:0:0:71:0%:99:1E0:46:71:34:37:71 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:22 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:43 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:44:0%:81:1E0:49:44:23:21:45 0/0:0:0:0:0:17:0%:33:1E0:51:17:12:5:17 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:35 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:45 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:42 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:64:0%:99:1E0:47:64:26:38:65 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:16:0%:29:1E0:48:16:4:12:16 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:38:0%:70:1E0:49:38:20:18:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:21:0%:40:1E0:53:21:12:9:21 0/0:0:0:0:0:34:0%:62:1E0:54:34:15:19:34 1/1:44:39:19:20:43:90.7%:99:2.6872E-20:38:4:2:2:44 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:32 0/0:0:0:0:0:45:0%:85:1E0:50:45:21:24:45 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:51:26:22:4:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:45 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 0/0:38:1:1:0:54:1.85%:87:5E-1:40:53:24:29:54 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:53 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:44 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:23 0/0:0:0:0:0:14:0%:25:1E0:50:14:8:6:14 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:38 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:56:0%:99:1E0:43:56:31:25:57 0/0:0:0:0:0:65:0%:99:1E0:44:65:34:31:66 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:51:0%:97:1E0:39:51:36:15:54 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:43 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:55 0/0:0:0:0:0:47:0%:89:1E0:39:47:24:23:48 0/0:0:0:0:0:52:0%:96:1E0:39:52:25:27:53 0/0:0:0:0:0:51:0%:97:1E0:41:51:22:29:52 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:45 0/0:0:0:0:0:40:0%:74:1E0:38:40:14:26:41 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:49 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:43 0/0:0:0:0:0:63:0%:99:1E0:40:63:26:37:65 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:43 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:52:0%:96:1E0:40:52:27:25:52 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:16 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:46:0%:85:1E0:45:46:17:29:46 0/0:0:0:0:0:61:0%:99:1E0:45:61:29:32:62 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:41 MTB_anc 2721013 . A G . PASS AC=9;AF=0.030;AN=300;ANN=G|synonymous_variant|LOW|Rv2424c_Rv2424c|gene2475|transcript|Transcript_gene2475|Coding|1/1|c.765T>C|p.Arg255Arg|765/1002|765/1002|255/333||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2721013A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2721013A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:45 0/0:0:0:0:0:9:0%:18:1E0:50:9:3:6:9 0/0:0:0:0:0:29:0%:55:1E0:48:29:20:9:30 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:15 0/0:37:2:2:0:23:8.7%:28:2.4444E-1:45:21:11:10:23 0/0:35:5:4:1:17:29.41%:8:2.2239E-2:43:12:5:7:17 0/0:0:0:0:0:31:0%:59:1E0:50:31:16:15:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:17 0/0:0:0:0:0:21:0%:40:1E0:49:21:7:14:21 0/0:43:3:1:2:23:13.04%:22:1.1667E-1:46:20:15:5:24 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:43 0/0:0:0:0:0:12:0%:21:1E0:49:12:7:5:12 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:26 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:21 0/0:34:2:2:0:17:11.76%:18:2.4242E-1:45:15:7:8:18 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:23:8:31 0/0:33:2:0:2:16:12.5%:15:2.4194E-1:44:14:10:4:16 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:11:0%:22:1E0:44:11:4:7:11 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:15 0/0:39:5:1:4:32:15.62%:24:2.6412E-2:45:27:13:14:34 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:16:0%:29:1E0:49:16:9:7:17 0/0:0:0:0:0:27:0%:52:1E0:48:27:18:9:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:14:4:18 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:52:0%:96:1E0:45:52:31:21:54 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:37:4:2:2:34:11.76%:31:5.6946E-2:41:30:22:8:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:12:0%:21:1E0:44:12:8:4:12 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:37 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:18 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:42 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:32 0/0:42:4:1:3:21:19.05%:15:5.3471E-2:43:17:6:11:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:10:22:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:35:2:0:2:23:8.7%:28:2.4444E-1:45:21:7:14:23 0/0:37:4:4:0:33:12.12%:32:5.6777E-2:52:29:18:11:33 0/0:36:3:3:0:40:7.5%:46:1.2025E-1:45:37:13:24:41 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:38:5:4:1:43:11.63%:41:2.764E-2:44:38:18:20:44 0/0:0:0:0:0:17:0%:33:1E0:40:17:12:5:17 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:31 0/0:38:1:1:0:14:7.14%:17:5E-1:51:13:3:10:14 0/0:0:0:0:0:9:0%:18:1E0:45:9:5:4:10 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/1:37:7:4:3:37:18.92%:22:5.721E-3:43:30:18:12:39 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:23:0%:44:1E0:52:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:23 0/1:35:10:7:3:45:22.22%:32:5.5766E-4:45:35:19:16:46 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:34:5:5:0:25:20%:17:2.5076E-2:37:20:11:9:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:21 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:11 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:38:3:2:1:35:8.57%:40:1.1957E-1:47:32:14:18:35 0/0:0:0:0:0:13:0%:25:1E0:49:13:6:7:13 0/0:0:0:0:0:43:0%:82:1E0:43:43:28:15:45 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:49:0%:93:1E0:42:49:34:15:50 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:19 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:36:6:2:4:38:15.79%:28:1.2628E-2:44:32:14:18:40 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/1:36:8:4:4:36:22.22%:25:2.5282E-3:43:28:14:14:38 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:17:0%:33:1E0:45:17:11:6:17 0/0:0:0:0:0:24:0%:44:1E0:50:24:7:17:24 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:22 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:41:0%:78:1E0:41:41:28:13:43 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:30 0/0:34:3:3:0:36:8.33%:40:1.1972E-1:44:33:17:16:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:49 0/1:36:8:6:2:50:16%:25:2.8851E-3:40:42:23:19:52 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:17 0/1:35:15:12:3:50:30%:50:8.8847E-6:40:35:20:15:55 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:22 0/0:0:0:0:0:43:0%:82:1E0:39:43:28:15:45 0/0:0:0:0:0:47:0%:89:1E0:40:47:26:21:48 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/1:36:8:7:1:39:20.51%:25:2.624E-3:37:31:13:18:41 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:31 0/0:36:6:4:2:33:18.18%:23:1.219E-2:39:27:10:17:37 0/1:35:7:5:2:37:18.92%:22:5.721E-3:38:30:17:13:37 0/0:34:6:6:0:40:15%:30:1.2773E-2:40:34:16:18:41 0/0:0:0:0:0:45:0%:85:1E0:37:45:22:23:47 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:35 0/1:36:16:13:3:48:33.33%:54:3.4048E-6:41:32:17:15:48 0/0:34:2:1:1:23:8.7%:28:2.4444E-1:42:21:10:11:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:36:3:3:0:33:9.09%:37:1.1923E-1:41:30:15:15:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:35:5:5:0:32:15.62%:24:2.6412E-2:45:27:13:14:32 0/1:36:8:6:2:39:20.51%:25:2.624E-3:46:31:13:18:39 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:46 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 MTB_anc 2723506 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv2426c_Rv2426c|gene2477|transcript|Transcript_gene2477|Coding|1/1|c.678G>A|p.Leu226Leu|678/876|678/876|226/291||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2723506C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2723506C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:46:38:25:13:39:97.44%:99:1.4697E-21:37:1:0:1:39 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:54:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:51:29:11:18:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:70:36:34:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:47:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:13:11:25:100%:99:3.101E-14:0:0:0:0:27 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:56:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:30:18:12:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:54:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:48:28:20:50:97.96%:99:1.9625E-27:38:1:0:1:52 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 2731920 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2435c_Rv2435c|gene2487|transcript|Transcript_gene2487|Coding|1/1|c.830A>G|p.Gln277Arg|830/2193|830/2193|277/730||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2731920T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2731920T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:22:8:14:23:95.65%:99:2.9149E-12:39:1:1:0:23 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:14:8:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:45:22:23:46:97.83%:99:9.6314E-27:0:0:0:0:47 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:36:15:21:37:97.3%:99:2.1762E-20:60:1:1:0:38 1/1:52:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:10:17:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:38:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:44:61:28:33:61:100%:99:2.609E-36:0:0:0:0:64 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:41:16:25:42:97.62%:99:2.3541E-24:0:0:0:0:44 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:45:12:33:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:37:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:64:19:45:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 2736332 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|nadE_Rv2438c|gene2490|transcript|Transcript_gene2490|Coding|1/1|c.500C>T|p.Pro167Leu|500/2040|500/2040|167/679||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2736332G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2736332G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:53 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:48 0/0:0:0:0:0:16:0%:29:1E0:48:16:10:6:16 0/0:60:1:1:0:25:4%:38:5E-1:41:24:9:15:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:27 0/0:0:0:0:0:26:0%:47:1E0:48:26:17:9:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:49:26:7:19:27 0/0:0:0:0:0:48:0%:89:1E0:39:48:24:24:49 0/0:0:0:0:0:13:0%:25:1E0:49:13:5:8:13 0/0:0:0:0:0:50:0%:92:1E0:43:50:23:27:50 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:39 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:49:31:23:8:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:36 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:42 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:48 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:12:22:34 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:27 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:26 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:21 0/0:0:0:0:0:29:0%:55:1E0:51:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:22:0%:40:1E0:53:22:14:8:22 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:48:0%:89:1E0:47:48:26:22:48 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:50:0%:92:1E0:43:50:22:28:51 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:48:0%:89:1E0:40:48:21:27:49 0/0:0:0:0:0:48:0%:89:1E0:46:48:24:24:49 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:38 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:19 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:22 0/0:0:0:0:0:49:0%:93:1E0:46:49:27:22:50 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:49:0%:93:1E0:44:49:17:32:51 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:38 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:44:0%:81:1E0:45:44:17:27:44 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:42:0%:77:1E0:46:42:27:15:42 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:47 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:39 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:34 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:41:0%:78:1E0:47:41:17:24:41 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:17:0%:33:1E0:49:17:7:10:17 0/0:0:0:0:0:44:0%:81:1E0:47:44:21:23:44 0/0:0:0:0:0:54:0%:99:1E0:45:54:22:32:55 0/0:60:1:1:0:29:3.45%:45:5E-1:47:28:13:15:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:60:1:1:0:41:2.44%:66:5E-1:48:40:23:17:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:55 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:35 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:43 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:42 0/0:0:0:0:0:15:0%:29:1E0:49:15:6:9:15 0/0:0:0:0:0:29:0%:55:1E0:46:29:20:9:29 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:24:0%:44:1E0:51:24:14:10:24 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:49 0/0:0:0:0:0:29:0%:55:1E0:44:29:9:20:29 0/0:0:0:0:0:41:0%:78:1E0:40:41:25:16:42 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:8:20:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:46:0%:85:1E0:39:46:20:26:46 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:21:0%:40:1E0:48:21:14:7:21 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:42 0/0:39:1:1:0:33:3.03%:52:5E-1:44:32:16:16:33 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:20 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:38:1:1:0:28:3.57%:41:5E-1:44:27:13:14:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:8:18:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:10:22:32 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:7:18:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:37 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:46 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:25 0/0:0:0:0:0:51:0%:97:1E0:42:51:19:32:51 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:21 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:42:0%:77:1E0:38:42:23:19:47 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:44 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:36:32:12:20:32 0/0:0:0:0:0:56:0%:99:1E0:42:56:24:32:56 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:40 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:54:0%:99:1E0:39:54:30:24:54 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:43 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:38 0/0:0:0:0:0:46:0%:85:1E0:39:46:16:30:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:33 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:18:0%:32:1E0:43:18:5:13:18 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:29 0/0:0:0:0:0:50:0%:92:1E0:46:50:23:27:50 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:46 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:43 MTB_anc 2739174 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|obg_Rv2440c|gene2493|transcript|Transcript_gene2493|Coding|1/1|c.513A>C|p.Gly171Gly|513/1440|513/1440|171/479||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2739174T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2739174T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:16:9:7:17:94.12%:81:7.7134E-9:39:1:1:0:18 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:34:27:7:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:15:6:9:16:93.75%:75:2.8282E-8:60:1:1:0:17 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:32:19:13:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:25:11:14:26:96.15%:99:5.4444E-14:60:1:1:0:27 1/1:44:22:12:10:23:95.65%:99:2.9149E-12:38:1:1:0:23 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:23:10:13:24:95.83%:99:7.7525E-13:49:1:0:1:24 1/1:36:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 2740550 . AGATC A . PASS AC=31;AF=0.103;AN=300;ANN=A|intergenic_region|MODIFIER|rplU_Rv2442c-dctA_Rv2443|gene2495-gene2496|intergenic_region|gene2495-gene2496|||n.2740551_2740554delGATC||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:37:36:22:14:36 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 1/1:39:52:22:30:51:100%:99:6.3169E-31:0:0:0:0:52 0/0:38:1:0:1:16:6.25%:21:5E-1:38:15:12:3:16 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:26 1/1:40:17:9:8:18:94.44%:86:2.0936E-9:37:1:0:1:18 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:36 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:41 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:23 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:23:0%:44:1E0:38:23:15:8:23 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:20 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:43 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:21 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:22 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:22 0/0:0:0:0:0:17:0%:33:1E0:42:17:10:7:17 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:26 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:19 0/0:0:0:0:0:12:0%:21:1E0:37:12:7:5:12 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:28 0/0:0:0:0:0:47:0%:89:1E0:42:47:19:28:47 1/1:41:33:16:17:33:97.06%:99:1.2301E-18:33:1:1:0:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:34 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:19 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:24 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:36:25:16:9:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:24 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:40 0/0:0:0:0:0:37:0%:70:1E0:38:37:24:13:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:31 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:19 0/0:0:0:0:0:38:0%:70:1E0:37:38:16:22:39 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:29 0/0:0:0:0:0:14:0%:25:1E0:39:14:5:9:14 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:22 0/0:0:0:0:0:20:0%:36:1E0:39:20:15:5:21 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:36 0/0:0:0:0:0:66:0%:99:1E0:41:66:37:29:69 0/0:0:0:0:0:19:0%:37:1E0:36:19:13:6:21 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:30 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:17 0/0:38:1:0:1:21:4.76%:31:5E-1:40:20:11:9:21 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:38:23:7:16:24 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:31 1/1:36:18:11:7:20:90%:87:1.6758E-9:33:2:2:0:20 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:34:0%:62:1E0:38:34:11:23:34 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:35 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:22 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:31 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:20 0/0:0:0:0:0:28:0%:51:1E0:36:28:12:16:28 0/0:0:0:0:0:14:0%:25:1E0:37:14:10:4:14 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:32 0/0:0:0:0:0:23:0%:44:1E0:43:23:17:6:23 0/0:0:0:0:0:38:0%:70:1E0:38:38:20:18:40 0/0:0:0:0:0:25:0%:48:1E0:37:25:17:8:25 0/0:0:0:0:0:38:0%:70:1E0:37:38:22:16:39 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:31 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:17 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:23 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:17 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:23 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:26 0/0:0:0:0:0:28:0%:51:1E0:37:28:15:13:29 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:19 0/1:33:15:10:5:15:88.24%:71:7.3277E-8:32:2:1:1:17 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:24 1/1:34:22:9:13:21:95.65%:99:2.9149E-12:29:1:1:0:23 1/1:34:36:22:14:32:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:37 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:41 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:34 0/0:0:0:0:0:20:0%:36:1E0:37:20:5:15:20 0/0:0:0:0:0:14:0%:25:1E0:37:14:12:2:14 0/0:0:0:0:0:33:0%:63:1E0:36:33:14:19:34 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:25 1/1:34:38:21:17:37:97.44%:99:1.4697E-21:32:1:0:1:39 1/1:37:35:20:15:34:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:29:0%:55:1E0:36:29:18:11:32 0/0:0:0:0:0:39:0%:74:1E0:38:39:24:15:40 0/0:0:0:0:0:28:0%:51:1E0:36:28:17:11:29 0/0:0:0:0:0:31:0%:59:1E0:37:31:12:19:31 1/1:35:32:17:15:32:96.97%:99:4.7095E-18:35:1:0:1:33 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:30 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:20 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:0:0:0:0:37:0%:70:1E0:37:37:23:14:38 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:22 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:27 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:27 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:19 1/1:36:33:19:14:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:22:16:6:23:95.65%:99:2.9149E-12:35:1:0:1:23 1/1:36:22:9:13:23:91.67%:99:1.0078E-11:35:2:1:1:24 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:37:34:12:22:34 0/0:0:0:0:0:36:0%:66:1E0:38:36:15:21:37 0/0:0:0:0:0:36:0%:66:1E0:37:36:18:18:36 MTB_anc 2740693 . C T . PASS AC=298;AF=1.00;AN=298;ANN=T|intergenic_region|MODIFIER|rplU_Rv2442c-dctA_Rv2443|gene2495-gene2496|intergenic_region|gene2495-gene2496|||n.2740693C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:36:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:37:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:34:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:35:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:37:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:35:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:15 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:36:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:34:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:35:29:25:4:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:37:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 MTB_anc 2742582 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|rne_Rv2444c|gene2497|transcript|Transcript_gene2497|Coding|1/1|c.2403C>G|p.Val801Val|2403/2862|2403/2862|801/953||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.2742582G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.2742582G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:18:9:9:19:94.74%:92:5.6585E-10:27:1:1:0:20 1/1:45:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:47:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:33:14:19:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:14:13:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:71:35:36:71:100%:99:2.6835E-42:0:0:0:0:74 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:31:14:17:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:38:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:29:12:17:30:96.67%:99:2.6212E-16:38:1:1:0:30 MTB_anc 2742891 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|rne_Rv2444c|gene2497|transcript|Transcript_gene2497|Coding|1/1|c.2094G>A|p.Glu698Glu|2094/2862|2094/2862|698/953||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.2742891C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.2742891C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:51:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:53:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:47:21:26:48:97.92%:99:7.6145E-27:39:1:1:0:48 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:60:28:32:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:23:7:16:24:95.83%:99:7.7525E-13:37:1:1:0:25 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:60 1/1:39:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:39:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 2744054 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|rne_Rv2444c|gene2497|transcript|Transcript_gene2497|Coding|1/1|c.931C>T|p.Arg311Trp|931/2862|931/2862|311/953||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.2744054G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.2744054G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:44 0/0:0:0:0:0:17:0%:33:1E0:51:17:9:8:18 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:45 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:17:5:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:50:24:8:16:26 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:24 0/0:0:0:0:0:28:0%:51:1E0:51:28:18:10:29 0/0:38:1:1:0:50:2%:80:5E-1:42:49:30:19:51 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:16 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:46 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:33 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:28 0/0:0:0:0:0:61:0%:99:1E0:45:61:39:22:63 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:38 0/0:0:0:0:0:13:0%:25:1E0:47:13:7:6:13 0/0:0:0:0:0:17:0%:33:1E0:46:17:13:4:18 0/0:60:1:0:1:21:4.76%:31:5E-1:44:20:10:10:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:44:0%:81:1E0:40:44:27:17:45 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:30:1:1:0:28:3.57%:41:5E-1:42:27:13:14:28 0/0:0:0:0:0:42:0%:77:1E0:38:42:23:19:43 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:34 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:45 0/0:0:0:0:0:37:0%:66:1E0:43:36:17:19:38 0/0:0:0:0:0:55:0%:99:1E0:44:55:27:28:56 0/0:0:0:0:0:49:0%:93:1E0:41:49:20:29:49 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:41 0/0:0:0:0:0:43:0%:82:1E0:39:43:31:12:46 0/0:60:1:1:0:45:2.22%:73:5E-1:43:44:24:20:45 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:26 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:39 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:45:0%:85:1E0:40:45:32:13:47 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:44:0%:81:1E0:42:44:30:14:44 0/0:60:1:1:0:44:2.27%:69:5E-1:43:43:17:26:45 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:17 0/0:0:0:0:0:51:0%:97:1E0:45:51:29:22:51 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:15 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:51:0%:97:1E0:39:51:30:21:51 0/0:0:0:0:0:57:0%:99:1E0:42:57:35:22:57 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:39 0/0:0:0:0:0:60:0%:99:1E0:44:60:32:28:60 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:41 0/0:0:0:0:0:45:0%:85:1E0:47:45:26:19:46 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:45 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:26 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:24:11:37 0/0:0:0:0:0:50:0%:92:1E0:43:50:26:24:51 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:18 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/1:49:25:11:14:29:86.21%:99:1.3609E-12:54:4:1:3:29 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:16 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:53 0/0:0:0:0:0:35:0%:67:1E0:45:35:24:11:38 0/0:38:1:1:0:42:2.38%:66:5E-1:40:41:27:14:44 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:57:0%:99:1E0:44:57:31:26:57 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:37 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:34 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:25 0/0:0:0:0:0:56:0%:99:1E0:43:56:33:23:56 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:41 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:23 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:21 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:32 0/0:0:0:0:0:23:0%:44:1E0:37:23:17:6:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:37 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:24:0%:44:1E0:43:24:16:8:24 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:41 0/0:0:0:0:0:49:0%:93:1E0:40:49:32:17:50 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:25 0/0:0:0:0:0:13:0%:25:1E0:41:13:5:8:14 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:44 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:46 0/0:0:0:0:0:46:0%:85:1E0:38:46:26:20:47 0/0:0:0:0:0:40:0%:74:1E0:37:40:22:18:44 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:35 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:42 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:40 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:36 0/0:0:0:0:0:31:0%:59:1E0:36:31:20:11:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:23:13:36 0/0:0:0:0:0:52:0%:96:1E0:38:52:28:24:52 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:37:1:0:1:39:2.56%:62:5E-1:43:38:19:19:41 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:46 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:46 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:35 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:18:0%:32:1E0:43:18:13:5:18 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 0/0:0:0:0:0:51:0%:97:1E0:40:51:24:27:51 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:35 MTB_anc 2746920 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|folC_Rv2447c|gene2500|transcript|Transcript_gene2500|Coding|1/1|c.679T>G|p.Ser227Ala|679/1464|679/1464|227/487||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2746920A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PAS|||n.2746920A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2746920A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:28:22:50 0/0:0:0:0:0:18:0%:32:1E0:52:18:7:11:18 0/0:0:0:0:0:46:0%:85:1E0:48:46:26:20:46 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:33 0/0:0:0:0:0:22:0%:40:1E0:46:22:16:6:22 0/0:0:0:0:0:23:0%:44:1E0:52:23:10:13:24 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:37 0/0:0:0:0:0:60:0%:99:1E0:42:60:31:29:61 0/0:0:0:0:0:22:0%:40:1E0:50:22:7:15:22 0/0:0:0:0:0:57:0%:99:1E0:44:57:26:31:59 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:22 0/0:0:0:0:0:20:0%:36:1E0:51:20:10:10:20 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:52:0%:96:1E0:43:52:29:23:52 0/0:0:0:0:0:26:0%:47:1E0:52:26:12:14:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:38 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:43 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:16:0%:29:1E0:43:16:5:11:16 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:38 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:51:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:15:24:39 0/0:0:0:0:0:38:0%:70:1E0:49:38:30:8:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:37 0/0:0:0:0:0:56:0%:99:1E0:47:56:32:24:56 0/0:0:0:0:0:53:0%:99:1E0:46:53:28:25:53 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:49 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:38:1:1:0:30:3.33%:44:5E-1:47:29:8:21:31 0/0:39:1:1:0:35:2.86%:55:5E-1:46:34:19:15:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 0/0:0:0:0:0:28:0%:51:1E0:49:28:16:12:29 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:45 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:43 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:24:0%:44:1E0:50:24:15:9:24 0/0:0:0:0:0:49:0%:93:1E0:42:49:24:25:49 0/0:0:0:0:0:29:0%:55:1E0:48:29:9:20:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:7:15:22 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:45 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:37 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:48:0%:89:1E0:45:48:28:20:49 0/0:0:0:0:0:48:0%:89:1E0:45:48:27:21:49 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:25 0/0:0:0:0:0:62:0%:99:1E0:47:62:31:31:62 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:33 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:42 0/0:0:0:0:0:20:0%:36:1E0:44:20:15:5:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:21:0%:40:1E0:52:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:43 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 1/1:48:39:18:21:40:97.5%:99:3.8137E-22:37:1:0:1:40 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:40:0%:74:1E0:48:40:16:24:40 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:23:0%:44:1E0:53:23:12:11:23 0/0:0:0:0:0:39:0%:74:1E0:46:39:25:14:39 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:24 0/0:0:0:0:0:41:0%:78:1E0:47:41:16:25:42 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:47:0%:89:1E0:43:47:27:20:49 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:54:0%:99:1E0:42:54:26:28:54 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:37 0/0:0:0:0:0:37:0%:70:1E0:48:37:14:23:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:41 0/0:0:0:0:0:32:0%:59:1E0:46:32:11:21:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:8:21:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:39 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:61:0%:99:1E0:43:61:22:39:64 0/0:0:0:0:0:50:0%:92:1E0:41:50:29:21:50 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:54:0%:99:1E0:43:54:24:30:55 0/0:30:1:1:0:43:2.33%:70:5E-1:38:42:17:25:45 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:38 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:47 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:45 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:42 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:41 0/0:0:0:0:0:56:0%:99:1E0:40:56:25:31:59 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:39 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:40 0/0:0:0:0:0:60:0%:99:1E0:39:60:29:31:64 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:50 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:56:0%:99:1E0:41:56:24:32:56 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:39 0/0:0:0:0:0:57:0%:99:1E0:42:57:26:31:57 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:31 MTB_anc 2752881 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv2452c_Rv2452c|gene2505|transcript|Transcript_gene2505|Coding|1/1|c.114G>A|p.Leu38Leu|114/147|114/147|38/48||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2752881C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2752881C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:39:19:20:40:97.5%:99:3.8137E-22:39:1:1:0:40 1/1:47:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:47:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:21:10:11:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:64:26:38:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:44:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:66:36:30:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:45:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 2759390 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|clpX_Rv2457c|gene2510|transcript|Transcript_gene2510|Coding|1/1|c.99C>T|p.Tyr33Tyr|99/1281|99/1281|33/426||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2759390G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2759390G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:13:16:30:96.67%:99:2.6212E-16:38:1:0:1:31 1/1:50:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:54:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:60:39:21:60:100%:99:1.035E-35:0:0:0:0:61 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:36:17:19:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:68:31:37:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:48:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:53:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:16:18:35:97.14%:99:3.2089E-19:39:1:0:1:35 1/1:46:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:76:31:45:76:100%:99:2.711E-45:0:0:0:0:78 1/1:41:73:40:33:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:63:32:31:63:100%:99:1.657E-37:0:0:0:0:64 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:64:27:37:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 2760082 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|mmuM_Rv2458|gene2511|transcript|Transcript_gene2511|Coding|1/1|c.304G>A|p.Gly102Ser|304/909|304/909|102/302||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2760082G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2760082G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:48 0/0:0:0:0:0:20:0%:36:1E0:55:20:7:13:20 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:33:1:1:0:30:3.33%:44:5E-1:46:29:13:16:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:47 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:19:10:29 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:37:1:1:0:19:5.26%:28:5E-1:45:18:9:9:19 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:19 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:41 0/0:0:0:0:0:50:0%:92:1E0:43:50:18:32:51 0/0:0:0:0:0:21:0%:40:1E0:50:21:13:8:21 0/0:0:0:0:0:37:0%:70:1E0:47:37:26:11:37 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:49 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:46 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:30 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:47 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:43 0/0:0:0:0:0:58:0%:99:1E0:49:58:31:27:58 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:50:0%:92:1E0:46:50:25:25:51 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:22:9:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:44 0/0:0:0:0:0:61:0%:99:1E0:44:61:34:27:62 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:14:0%:25:1E0:48:14:8:6:15 0/0:0:0:0:0:48:0%:89:1E0:43:48:21:27:50 0/0:0:0:0:0:15:0%:29:1E0:47:15:10:5:15 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:49 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:54:0%:99:1E0:43:54:26:28:54 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:36 0/0:0:0:0:0:57:0%:99:1E0:42:57:26:31:57 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:37:1:1:0:35:2.86%:55:5E-1:46:34:13:21:35 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:51 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:39 0/0:0:0:0:0:30:0%:55:1E0:46:30:9:21:30 0/0:0:0:0:0:17:0%:33:1E0:47:17:8:9:18 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:35 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:45 0/0:0:0:0:0:18:0%:32:1E0:43:18:6:12:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:9:22:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:25 0/0:39:1:0:1:48:2.08%:76:5E-1:43:47:25:22:49 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:44 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:20:0%:36:1E0:44:20:15:5:20 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:21:0%:40:1E0:55:21:12:9:21 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:67:0%:99:1E0:41:67:36:31:69 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:52 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:42 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:13:0%:25:1E0:40:13:6:7:13 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:39:0%:74:1E0:46:39:25:14:39 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:38 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:25:0%:48:1E0:40:25:18:7:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:27:13:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:20 0/0:0:0:0:0:53:0%:99:1E0:44:53:26:27:53 0/0:0:0:0:0:51:0%:97:1E0:40:51:24:27:51 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:14:0%:25:1E0:46:14:5:9:15 0/0:0:0:0:0:49:0%:93:1E0:40:49:24:25:50 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:35 0/0:0:0:0:0:47:0%:89:1E0:40:47:19:28:49 0/0:0:0:0:0:31:0%:59:1E0:40:31:21:10:33 0/0:0:0:0:0:43:0%:82:1E0:40:43:26:17:44 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:0:0:0:0:54:0%:99:1E0:42:54:23:31:54 0/0:0:0:0:0:37:0%:70:1E0:41:37:25:12:40 0/0:0:0:0:0:49:0%:93:1E0:39:49:28:21:51 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:47:0%:89:1E0:38:47:23:24:48 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:57:0%:99:1E0:38:57:24:33:60 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:46:0%:85:1E0:41:46:30:16:47 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:23 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:43 0/0:0:0:0:0:57:0%:99:1E0:43:57:26:31:58 0/0:0:0:0:0:37:0%:70:1E0:38:37:16:21:39 MTB_anc 2760241 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|mmuM_Rv2458|gene2511|transcript|Transcript_gene2511|Coding|1/1|c.463G>A|p.Glu155Lys|463/909|463/909|155/302||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2760241G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2760241G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:46:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:12:12:25:96%:99:2.0568E-13:39:1:1:0:25 1/1:42:28:17:11:29:96.55%:99:9.9776E-16:32:1:1:0:30 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:28:17:11:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:47:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:60:39:21:60:100%:99:1.035E-35:0:0:0:0:64 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:54:35:19:55:98.18%:99:5.6837E-31:60:1:1:0:55 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:48:33:15:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:34:22:12:35:97.14%:99:3.2089E-19:60:1:0:1:35 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 MTB_anc 2760353 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|mmuM_Rv2458|gene2511|transcript|Transcript_gene2511|Coding|1/1|c.575A>C|p.Gln192Pro|575/909|575/909|192/302||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2760353A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2760353A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:37:30:7:23:31 0/0:0:0:0:0:14:0%:25:1E0:41:14:9:5:15 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 0/0:0:0:0:0:17:0%:33:1E0:35:17:4:13:17 0/0:0:0:0:0:24:0%:44:1E0:36:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:28 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:23 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:21 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:20 0/0:37:1:0:1:38:2.63%:58:5E-1:37:37:20:17:38 0/0:0:0:0:0:11:0%:22:1E0:40:11:6:5:11 0/0:0:0:0:0:34:0%:62:1E0:36:34:13:21:34 0/0:0:0:0:0:26:0%:47:1E0:36:26:9:17:26 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:28 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:19:0%:37:1E0:35:19:4:15:19 0/0:0:0:0:0:18:0%:32:1E0:39:18:5:13:19 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:0:0:0:0:27:0%:52:1E0:36:27:10:17:27 0/0:0:0:0:0:28:0%:51:1E0:36:28:8:20:30 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:18 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:7:17:24 0/0:0:0:0:0:13:0%:25:1E0:38:13:3:10:14 0/0:0:0:0:0:15:0%:29:1E0:37:15:9:6:15 0/0:0:0:0:0:20:0%:36:1E0:37:20:3:17:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:38:40:15:25:40 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:19 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:28 0/0:0:0:0:0:27:0%:52:1E0:37:27:7:20:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 0/0:37:1:0:1:27:3.7%:41:5E-1:36:26:13:13:30 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:34 0/0:0:0:0:0:48:0%:89:1E0:37:48:16:32:49 0/0:0:0:0:0:31:0%:59:1E0:36:31:9:22:31 0/0:0:0:0:0:41:0%:78:1E0:37:41:13:28:42 0/0:0:0:0:0:31:0%:59:1E0:36:31:10:21:34 0/0:0:0:0:0:37:0%:70:1E0:37:37:11:26:39 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:20 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:26 0/0:0:0:0:0:34:0%:62:1E0:36:34:11:23:35 0/0:0:0:0:0:25:0%:48:1E0:40:25:9:16:25 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:28 0/0:0:0:0:0:36:0%:66:1E0:36:36:9:27:37 0/0:0:0:0:0:39:0%:74:1E0:37:39:19:20:39 0/0:0:0:0:0:33:0%:63:1E0:38:33:12:21:33 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:18 1/1:38:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:38 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:20 0/0:0:0:0:0:14:0%:25:1E0:40:14:6:8:16 0/0:0:0:0:0:33:0%:63:1E0:36:33:8:25:34 0/0:0:0:0:0:46:0%:85:1E0:36:46:17:29:46 0/0:0:0:0:0:32:0%:59:1E0:36:32:8:24:32 0/0:0:0:0:0:16:0%:29:1E0:39:16:3:13:16 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:37:32:10:22:32 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:22 0/0:0:0:0:0:37:0%:70:1E0:37:37:16:21:37 0/0:0:0:0:0:27:0%:52:1E0:36:27:11:16:27 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:17 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:24 0/0:0:0:0:0:46:0%:85:1E0:37:46:15:31:46 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:17 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:6:13:19 0/0:0:0:0:0:19:0%:37:1E0:39:19:4:15:19 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:45:0%:85:1E0:36:45:21:24:46 0/0:0:0:0:0:18:0%:32:1E0:35:18:8:10:19 0/0:0:0:0:0:27:0%:52:1E0:37:27:9:18:28 0/0:0:0:0:0:26:0%:47:1E0:37:26:8:18:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:31 0/0:0:0:0:0:27:0%:52:1E0:37:27:4:23:28 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:26 0/0:0:0:0:0:39:0%:74:1E0:36:39:20:19:41 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:27 0/0:0:0:0:0:32:0%:59:1E0:37:32:12:20:33 0/0:0:0:0:0:31:0%:59:1E0:37:31:9:22:31 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:26 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:16 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:40:25:9:16:25 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:16 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:41:0%:78:1E0:36:41:14:27:41 0/0:0:0:0:0:27:0%:52:1E0:36:27:9:18:27 0/0:0:0:0:0:41:0%:78:1E0:37:41:16:25:42 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:34:27:11:16:27 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:23 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:26 0/0:0:0:0:0:25:0%:48:1E0:36:25:11:14:25 0/0:0:0:0:0:17:0%:33:1E0:36:17:4:13:17 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:33 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:22 0/0:0:0:0:0:17:0%:33:1E0:36:17:8:9:18 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:28 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:24 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:22 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:28 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:8:15:23 0/0:0:0:0:0:20:0%:36:1E0:34:20:7:13:22 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:30 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:23 0/0:0:0:0:0:21:0%:40:1E0:35:21:5:16:21 0/0:0:0:0:0:19:0%:37:1E0:36:19:6:13:19 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:24 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:17 0/0:0:0:0:0:42:0%:77:1E0:37:42:18:24:44 0/0:0:0:0:0:37:0%:70:1E0:36:37:14:23:37 0/0:0:0:0:0:28:0%:51:1E0:36:28:11:17:28 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:35:39:13:26:40 0/0:0:0:0:0:31:0%:59:1E0:35:31:15:16:35 0/0:0:0:0:0:30:0%:55:1E0:36:30:6:24:30 0/0:0:0:0:0:24:0%:44:1E0:35:24:3:21:24 0/0:0:0:0:0:46:0%:85:1E0:36:46:11:35:47 0/0:0:0:0:0:32:0%:59:1E0:37:32:10:22:32 0/0:0:0:0:0:35:0%:67:1E0:36:35:14:21:38 0/0:0:0:0:0:35:0%:67:1E0:35:35:13:22:36 0/0:0:0:0:0:30:0%:55:1E0:36:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:36:29:10:19:29 0/0:0:0:0:0:29:0%:55:1E0:35:29:11:18:30 0/0:0:0:0:0:19:0%:37:1E0:34:19:6:13:19 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:33 0/0:0:0:0:0:35:0%:67:1E0:36:35:8:27:36 0/0:0:0:0:0:35:0%:67:1E0:35:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:38:33:7:26:34 0/0:0:0:0:0:37:0%:70:1E0:38:37:14:23:37 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:28 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:21 0/0:0:0:0:0:22:0%:40:1E0:35:22:8:14:22 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:29 0/0:0:0:0:0:34:0%:62:1E0:37:34:8:26:35 0/0:0:0:0:0:17:0%:33:1E0:35:17:7:10:17 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:29 0/0:0:0:0:0:38:0%:70:1E0:38:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:38:38:10:28:40 0/0:0:0:0:0:28:0%:51:1E0:36:28:11:17:28 MTB_anc 2760387 . A C . PASS AC=124;AF=0.413;AN=300;ANN=C|synonymous_variant|LOW|mmuM_Rv2458|gene2511|transcript|Transcript_gene2511|Coding|1/1|c.609A>C|p.Gly203Gly|609/909|609/909|203/302||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2760387A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2760387A>C||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:38:0%:70:1E0:40:38:11:27:38 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:17 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:26 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:35:13:22:36:97.22%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:26 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:23:0%:44:1E0:40:23:7:16:24 0/0:0:0:0:0:30:0%:55:1E0:39:30:10:20:30 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:21 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:21 0/0:0:0:0:0:35:0%:67:1E0:39:35:13:22:35 1/1:37:38:10:28:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:6:18:24 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:13:0%:25:1E0:39:13:8:5:13 1/1:41:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:17 0/0:0:0:0:0:30:0%:55:1E0:44:30:8:22:30 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:45:14:31:46:97.83%:99:1.1441E-25:38:1:1:0:46 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:37 1/1:38:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:33:0%:63:1E0:37:33:11:22:34 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:39:36:10:26:36 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:33 1/1:39:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:41:0%:78:1E0:40:41:11:30:42 1/1:39:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:37:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:15:0%:29:1E0:40:15:3:12:15 1/1:38:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:28 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:23:0%:44:1E0:38:23:7:16:23 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 0/0:0:0:0:0:42:0%:77:1E0:38:42:12:30:42 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:19 0/0:0:0:0:0:32:0%:59:1E0:40:32:9:23:33 1/1:43:26:9:17:27:96.3%:99:1.4382E-14:37:1:0:1:27 1/1:40:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 1/1:44:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:46 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 1/1:37:31:5:26:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:40:0%:74:1E0:38:40:17:23:41 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:10:21:31 0/0:0:0:0:0:39:0%:74:1E0:38:39:14:25:39 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:31 1/1:43:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:17:0%:33:1E0:40:17:7:10:17 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:41:10:31:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:25 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:26 0/0:0:0:0:0:29:0%:55:1E0:38:29:10:19:30 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:28 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:15 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:36 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:23 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:5:20:25 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:29 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:22 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:23 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:37:29:8:21:29 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:26 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:23 0/0:0:0:0:0:25:0%:48:1E0:41:25:5:20:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 0/0:0:0:0:0:47:0%:89:1E0:36:47:21:26:47 0/0:0:0:0:0:41:0%:78:1E0:37:41:15:26:42 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:28 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:25 0/0:0:0:0:0:41:0%:78:1E0:37:41:15:26:43 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:44 0/0:0:0:0:0:32:0%:59:1E0:37:32:9:23:33 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:28 0/0:0:0:0:0:48:0%:89:1E0:38:48:12:36:49 0/0:0:0:0:0:35:0%:67:1E0:38:35:12:23:39 0/0:0:0:0:0:36:0%:66:1E0:37:36:15:21:38 0/0:0:0:0:0:34:0%:62:1E0:37:34:11:23:35 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:31 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:32 0/0:0:0:0:0:21:0%:40:1E0:37:21:4:17:22 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:18 0/0:0:0:0:0:37:0%:70:1E0:39:37:13:24:37 1/1:37:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:33:12:21:34:97.06%:99:1.2301E-18:39:1:0:1:34 1/1:39:31:4:27:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:40:0%:74:1E0:39:40:15:25:41 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:29 0/0:0:0:0:0:18:0%:32:1E0:37:18:5:13:19 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:32 0/0:0:0:0:0:33:0%:63:1E0:38:33:7:26:34 0/0:0:0:0:0:16:0%:29:1E0:37:16:6:10:16 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:28 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:43 1/1:38:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 2764439 . C T . PASS AC=12;AF=0.040;AN=300;ANN=T|missense_variant|MODERATE|tig_Rv2462c|gene2515|transcript|Transcript_gene2515|Coding|1/1|c.853G>A|p.Ala285Thr|853/1401|853/1401|285/466||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2764439C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2764439C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:39:1:0:1:32:3.12%:48:5E-1:50:31:13:18:32 0/0:0:0:0:0:51:0%:97:1E0:49:51:20:31:51 0/0:0:0:0:0:49:0%:93:1E0:46:49:21:28:50 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:31 0/0:0:0:0:0:34:0%:62:1E0:50:34:18:16:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:7:16:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:43 0/0:0:0:0:0:10:0%:17:1E0:46:10:3:7:11 0/0:0:0:0:0:67:0%:99:1E0:44:67:39:28:68 0/0:0:0:0:0:23:0%:44:1E0:37:23:8:15:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:24 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:8:20:29 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:32 0/0:0:0:0:0:60:0%:99:1E0:41:60:22:38:60 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:40 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:34:0%:62:1E0:41:34:10:24:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:38:0%:70:1E0:49:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:42:0%:77:1E0:46:42:11:31:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:42 0/0:0:0:0:0:65:0%:99:1E0:44:65:27:38:65 0/0:0:0:0:0:44:0%:81:1E0:45:44:17:27:45 0/0:0:0:0:0:52:0%:96:1E0:42:52:21:31:53 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:27 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:23:0%:44:1E0:50:23:9:14:23 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:45 0/0:0:0:0:0:52:0%:96:1E0:47:52:26:26:53 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:49:0%:93:1E0:44:49:21:28:49 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:41 0/0:37:1:1:0:39:2.56%:62:5E-1:41:38:19:19:40 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:38:1:0:1:41:2.44%:66:5E-1:44:40:19:21:41 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:56 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:39:0%:74:1E0:45:39:13:26:40 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:32 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:26:0%:47:1E0:49:26:17:9:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:22 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:60:1:0:1:43:2.33%:70:5E-1:42:42:19:23:44 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:29:0%:55:1E0:49:29:18:11:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:18:0%:32:1E0:53:18:8:10:18 0/0:0:0:0:0:54:0%:99:1E0:39:54:30:24:56 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:36 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:20 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:30 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:50 0/0:0:0:0:0:34:0%:62:1E0:39:34:11:23:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:32 0/0:0:0:0:0:68:0%:99:1E0:39:68:37:31:69 0/0:0:0:0:0:55:0%:99:1E0:41:55:31:24:56 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:51:0%:97:1E0:40:51:19:32:52 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:40 0/0:0:0:0:0:55:0%:99:1E0:39:55:19:36:59 0/0:0:0:0:0:33:0%:63:1E0:38:33:10:23:36 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:38 0/0:0:0:0:0:47:0%:89:1E0:40:47:19:28:49 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:41 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:41 0/0:0:0:0:0:43:0%:82:1E0:40:43:11:32:44 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 0/0:0:0:0:0:54:0%:99:1E0:39:54:22:32:56 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:53:0%:99:1E0:39:53:19:34:55 0/0:0:0:0:0:56:0%:99:1E0:40:56:28:28:56 0/0:0:0:0:0:33:0%:63:1E0:41:33:7:26:33 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:47 0/0:37:1:0:1:39:2.56%:62:5E-1:42:38:18:20:39 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:39 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:49 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:60:1:0:1:28:3.57%:41:5E-1:44:27:14:13:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:36 MTB_anc 2764939 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|tig_Rv2462c|gene2515|transcript|Transcript_gene2515|Coding|1/1|c.353T>C|p.Leu118Pro|353/1401|353/1401|118/466||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2764939A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2764939A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:45:33:12:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:54:38:16:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:41:33:8:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:41:33:8:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:51:36:15:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:37:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:25:24:1:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:28:24:4:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:45:25:20:46:100%:99:9.6314E-27:0:0:0:0:49 1/1:38:49:36:13:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:36:40:35:5:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:36:28:8:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:37:48:33:15:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:51:35:16:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:37:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:29:16:13:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:36:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:31:25:6:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:38:29:9:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 2772016 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv2468c_Rv2468c|gene2523|transcript|Transcript_gene2523|Coding|1/1|c.132C>A|p.Pro44Pro|132/504|132/504|44/167||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2772016G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2772016G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:43:50:31:19:50 0/0:0:0:0:0:17:0%:33:1E0:51:17:12:5:17 0/0:0:0:0:0:61:0%:99:1E0:45:61:38:23:62 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:29 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:21 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:47:0%:89:1E0:40:47:22:25:48 0/0:0:0:0:0:23:0%:44:1E0:50:23:8:15:23 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:25:12:37 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:21 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:53:0%:99:1E0:48:53:28:25:53 0/0:39:1:1:0:33:3.03%:52:5E-1:44:32:13:19:33 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:37:1:1:0:28:3.57%:41:5E-1:46:27:14:13:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:42:21:15:6:21 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:31 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:45 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:56:0%:99:1E0:43:56:31:25:56 0/0:60:1:1:0:38:2.63%:58:5E-1:44:37:16:21:38 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:15:0%:29:1E0:45:15:10:5:15 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:39 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:20 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:29 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:51 0/0:0:0:0:0:36:0%:66:1E0:50:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:33 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:37 0/0:0:0:0:0:55:0%:99:1E0:46:55:39:16:55 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:32 0/0:0:0:0:0:17:0%:33:1E0:48:17:6:11:17 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:40:0%:74:1E0:47:40:15:25:40 0/0:0:0:0:0:9:0%:18:1E0:47:9:8:1:9 0/0:0:0:0:0:38:0%:70:1E0:50:38:22:16:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:35 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:22 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:19 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:43 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:43 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:40 0/0:0:0:0:0:38:0%:70:1E0:40:38:27:11:38 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:23 0/0:0:0:0:0:58:0%:99:1E0:42:58:27:31:59 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:45 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:11:0%:22:1E0:42:11:7:4:12 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:11:23:34 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:44 0/0:0:0:0:0:35:0%:67:1E0:41:35:11:24:37 0/0:0:0:0:0:56:0%:99:1E0:42:56:28:28:56 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:45 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:43 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:50:0%:92:1E0:38:50:24:26:51 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:43 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:41 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:47 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:54:0%:99:1E0:41:54:27:27:56 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 MTB_anc 2775592 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2473_Rv2473|gene2529|transcript|Transcript_gene2529|Coding|1/1|c.25G>A|p.Ala9Thr|25/717|25/717|9/238||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2775592G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2775592G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:58:39:19:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:35:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:20:9:11:21:95.24%:99:4.0873E-11:38:1:1:0:22 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:39:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:32:26:6:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:36:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:37:29:8:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:39:30:9:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 2775899 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2473_Rv2473|gene2529|transcript|Transcript_gene2529|Coding|1/1|c.332C>T|p.Pro111Leu|332/717|332/717|111/238||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2775899C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2775899C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:23:12:11:24:95.83%:99:7.7525E-13:36:1:1:0:24 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:25:12:13:26:96.15%:99:5.4444E-14:39:1:0:1:26 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 2779012 . G GC . PASS AC=2;AF=6.667e-03;AN=300;ANN=GC|frameshift_variant|HIGH|gdh_Rv2476c|gene2532|transcript|Transcript_gene2532|Coding|1/1|c.3250dupG|p.Ala1084fs|3250/4875|3250/4875|1084/1624||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2779012_2779013insC||||||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2779012_2779013insC||||||;HET=0;LOF=(gdh_Rv2476c|gene2532|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:49 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:37:1:0:1:60:1.67%:98:5E-1:46:59:27:32:61 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:35 0/0:0:0:0:0:24:0%:44:1E0:50:24:9:15:24 0/0:0:0:0:0:39:0%:74:1E0:49:39:20:19:42 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:34 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:47 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:16 0/0:38:1:1:0:53:1.89%:83:5E-1:43:51:30:21:55 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:20:0%:36:1E0:37:20:6:14:21 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:38 0/0:38:1:0:1:53:1.89%:88:5E-1:43:52:27:25:56 0/0:0:0:0:0:13:0%:25:1E0:50:13:6:7:15 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:60:1:1:0:24:4.17%:34:5E-1:48:23:12:11:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:21 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:37:1:0:1:34:2.94%:51:5E-1:45:33:21:12:34 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:26 0/0:33:1:0:1:28:3.57%:41:5E-1:41:26:17:9:30 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:27:1:1:0:37:2.7%:59:5E-1:42:36:15:21:37 0/0:0:0:0:0:46:0%:85:1E0:47:46:26:20:47 0/0:0:0:0:0:40:0%:74:1E0:50:40:20:20:41 0/0:0:0:0:0:52:0%:96:1E0:49:52:23:29:53 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:42 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:60:1:1:0:38:2.63%:58:5E-1:44:37:17:20:39 0/0:33:1:1:0:24:4.17%:34:5E-1:41:23:14:9:24 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:38:1:0:1:51:1.96%:84:5E-1:43:50:21:29:51 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:13:0%:25:1E0:44:13:4:9:13 0/0:37:1:0:1:43:2.33%:70:5E-1:42:42:19:23:45 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:27 0/0:0:0:0:0:57:0%:99:1E0:42:57:33:24:61 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:38:1:1:0:44:2.27%:69:5E-1:49:43:16:27:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:40 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:51:0%:97:1E0:46:51:26:25:51 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:22:0%:40:1E0:47:22:6:16:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:60:1:0:1:34:2.94%:51:5E-1:45:33:16:17:35 0/0:0:0:0:0:15:0%:29:1E0:52:15:8:7:15 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:17 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:28 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:53:0%:99:1E0:45:53:33:20:53 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:38:1:1:0:20:5%:27:5E-1:48:19:6:13:20 0/0:60:1:0:1:24:4.17%:34:5E-1:43:23:8:15:24 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:22 0/0:60:1:1:0:32:3.12%:48:5E-1:42:31:15:16:32 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:28 0/0:0:0:0:0:52:0%:96:1E0:40:52:23:29:53 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:30 0/0:0:0:0:0:58:0%:99:1E0:39:58:26:32:59 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:38:0%:70:1E0:40:38:11:27:38 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:37:1:0:1:35:2.86%:55:5E-1:39:34:19:15:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:37 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:32 0/0:60:1:0:1:27:3.7%:41:5E-1:40:26:13:13:31 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:60:1:1:0:33:3.03%:52:5E-1:39:32:16:16:34 0/0:0:0:0:0:64:0%:99:1E0:43:64:36:28:64 0/0:0:0:0:0:67:0%:99:1E0:42:67:30:37:67 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 1/1:42:26:13:13:26:92.86%:99:5.6872E-14:46:2:2:0:28 0/0:0:0:0:0:49:0%:93:1E0:39:49:28:21:51 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:50 0/0:0:0:0:0:57:0%:99:1E0:37:57:22:35:59 0/0:0:0:0:0:49:0%:93:1E0:36:49:22:27:51 0/0:0:0:0:0:47:0%:89:1E0:38:47:27:20:47 0/0:38:1:1:0:30:3.33%:44:5E-1:40:29:14:15:31 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:39 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:38 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:41 0/0:0:0:0:0:46:0%:85:1E0:39:46:21:25:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:40 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:41 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:25:1:0:1:53:1.89%:88:5E-1:37:52:26:26:53 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:43 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:39 0/0:0:0:0:0:38:0%:70:1E0:39:38:24:14:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:43 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:55:0%:99:1E0:42:55:32:23:56 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:44 0/0:0:0:0:0:45:0%:85:1E0:43:45:28:17:45 MTB_anc 2780137 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|gdh_Rv2476c|gene2532|transcript|Transcript_gene2532|Coding|1/1|c.2126C>T|p.Ser709Leu|2126/4875|2126/4875|709/1624||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2780137G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2780137G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:41 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:17 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:49 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:21 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:60:1:1:0:33:3.03%:52:5E-1:47:32:15:17:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:18:0%:32:1E0:52:18:7:11:18 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:46 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:11:25:36 0/0:0:0:0:0:49:0%:93:1E0:45:49:19:30:50 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:49:32:14:18:33 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:17 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:0:0:0:0:48:0%:89:1E0:46:48:22:26:48 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:44:0%:81:1E0:48:44:24:20:44 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:43 0/0:0:0:0:0:22:0%:40:1E0:53:22:9:13:22 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:28:15:43 0/0:0:0:0:0:57:0%:99:1E0:46:57:27:30:57 0/0:0:0:0:0:57:0%:99:1E0:45:57:24:33:57 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:48:0%:89:1E0:45:48:21:27:48 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:45 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:53:0%:99:1E0:40:53:24:29:53 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:45 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:46:0%:85:1E0:39:46:28:18:49 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:39 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:50:0%:92:1E0:42:50:25:25:52 0/0:0:0:0:0:37:0%:70:1E0:50:37:23:14:37 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:39 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:51 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:31 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:40 0/0:0:0:0:0:62:0%:99:1E0:47:62:26:36:63 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:12:0%:21:1E0:54:12:7:5:12 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:40:0%:74:1E0:48:40:22:18:41 0/0:0:0:0:0:33:0%:63:1E0:51:33:16:17:33 0/0:0:0:0:0:16:0%:29:1E0:53:16:8:8:16 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:21 0/0:0:0:0:0:56:0%:99:1E0:43:56:31:25:58 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:36:0%:66:1E0:48:36:21:15:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:30:1:0:1:29:3.45%:45:5E-1:43:28:12:16:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:53 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:11:24:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:28:0%:51:1E0:49:28:10:18:28 0/0:0:0:0:0:33:0%:63:1E0:49:33:13:20:33 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:26 0/0:0:0:0:0:38:0%:70:1E0:48:38:22:16:38 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:51:0%:97:1E0:42:51:31:20:54 0/0:38:1:1:0:43:2.33%:70:5E-1:45:42:17:25:43 0/0:0:0:0:0:56:0%:99:1E0:42:56:24:32:56 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/1:41:7:4:3:46:15.22%:22:6.1097E-3:41:39:16:23:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:57:0%:99:1E0:41:57:29:28:57 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:50 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:14:0%:25:1E0:40:14:2:12:14 0/0:0:0:0:0:59:0%:99:1E0:39:59:25:34:59 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:52 0/0:0:0:0:0:54:0%:99:1E0:41:54:24:30:54 0/0:0:0:0:0:52:0%:96:1E0:38:52:24:28:52 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:42 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:44 0/0:0:0:0:0:49:0%:93:1E0:42:49:12:37:49 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:26:14:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:17:29:46 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:46 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:62:0%:99:1E0:39:62:16:46:63 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:47 0/0:38:1:0:1:49:2.04%:80:5E-1:41:48:31:17:50 0/0:33:1:1:0:43:2.33%:70:5E-1:43:42:21:21:43 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:28 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:44 0/0:0:0:0:0:54:0%:99:1E0:44:54:27:27:54 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 MTB_anc 2783792 . G T . PASS AC=124;AF=0.413;AN=300;ANN=T|missense_variant|MODERATE|Rv2477c_Rv2477c|gene2533|transcript|Transcript_gene2533|Coding|1/1|c.251C>A|p.Thr84Asn|251/1677|251/1677|84/558||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2783792G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2783792G>T||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:36:16:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:49:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:47:0%:89:1E0:43:47:30:17:47 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:28 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:39 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:44 1/1:39:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:23 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:36:0%:66:1E0:46:36:26:10:37 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:30 1/1:43:69:30:39:69:100%:99:4.233E-41:0:0:0:0:72 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:44 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:67:41:26:67:100%:99:6.6743E-40:0:0:0:0:67 0/0:60:1:0:1:48:2.08%:76:5E-1:48:47:29:18:51 1/1:45:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:58 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:18:10:8:19:94.74%:92:5.6585E-10:33:1:1:0:20 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:36 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:60:1:1:0:43:2.33%:70:5E-1:44:42:24:18:43 0/0:0:0:0:0:63:0%:99:1E0:45:63:38:25:65 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:50:34:16:50:100%:99:9.9117E-30:0:0:0:0:52 0/0:0:0:0:0:29:0%:55:1E0:50:29:11:18:29 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:42 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:52 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 1/1:41:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:37:1:1:0:57:1.75%:95:5E-1:39:56:38:18:58 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:36 1/1:43:27:18:9:28:96.43%:99:3.7915E-15:34:1:1:0:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:22:12:34 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:46:0%:85:1E0:46:46:29:17:46 1/1:48:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:36:0%:66:1E0:41:36:25:11:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:19 0/0:39:1:1:0:36:2.78%:55:5E-1:45:35:23:12:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:42 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:41 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:45 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:33 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:46 0/0:0:0:0:0:31:0%:59:1E0:41:31:21:10:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:27:18:46 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:59:0%:99:1E0:40:59:33:26:60 0/0:0:0:0:0:60:0%:99:1E0:43:60:39:21:60 0/0:0:0:0:0:26:0%:47:1E0:43:26:19:7:28 0/0:0:0:0:0:46:0%:85:1E0:42:46:29:17:47 0/0:0:0:0:0:61:0%:99:1E0:41:61:34:27:61 0/0:0:0:0:0:60:0%:99:1E0:41:60:41:19:62 0/0:0:0:0:0:46:0%:85:1E0:41:46:29:17:48 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:48 0/0:0:0:0:0:45:0%:85:1E0:42:45:27:18:46 0/0:0:0:0:0:40:0%:74:1E0:39:40:26:14:44 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:41 0/0:0:0:0:0:53:0%:99:1E0:40:53:33:20:56 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:43 0/0:0:0:0:0:52:0%:96:1E0:41:52:30:22:55 0/0:0:0:0:0:42:0%:77:1E0:40:42:25:17:42 0/0:0:0:0:0:48:0%:89:1E0:42:48:24:24:48 1/1:39:71:35:36:71:100%:99:2.6835E-42:0:0:0:0:73 1/1:40:42:23:19:43:97.67%:99:6.6289E-24:25:1:0:1:43 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 0/0:0:0:0:0:46:0%:85:1E0:39:46:29:17:46 0/0:0:0:0:0:44:0%:81:1E0:44:44:31:13:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:28:9:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:26 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:32:1:1:0:41:2.44%:66:5E-1:44:40:23:17:42 1/1:43:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 2786785 . GCT G . PASS AC=299;AF=0.997;AN=300;ANN=G|frameshift_variant|HIGH|Rv2481c_Rv2481c|gene2535|transcript|Transcript_gene2535|Coding|1/1|c.112_113delAG|p.Ser38fs|113/324|112/324|38/107||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2786786_2786787delCT||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2786786_2786787delCT||||||;LOF=(Rv2481c_Rv2481c|gene2535|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:59:20:39:58:98.33%:99:6.3137E-34:33:1:0:1:60 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:31:13:18:32:96.88%:99:1.8007E-17:34:1:1:0:33 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:14:9:24:95.83%:99:7.7525E-13:35:1:0:1:24 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:42:22:20:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:20:9:11:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:55:23:32:55:96.49%:99:1.1048E-30:33:2:1:1:57 1/1:41:20:9:11:20:95.24%:99:4.0873E-11:34:1:1:0:21 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:22:7:15:21:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:18:4:14:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:30:13:17:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:27:15:12:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:40:22:18:41:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:42:48:20:28:47:100%:99:1.554E-28:0:0:0:0:48 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:26:8:18:28:92.86%:99:5.6872E-14:47:2:2:0:28 1/1:43:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:13:19:33:96.97%:99:4.7095E-18:34:1:1:0:33 1/1:41:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:51:17:34:51:98.08%:99:3.3479E-29:33:1:0:1:52 1/1:44:50:21:29:50:98.04%:99:1.3013E-28:33:1:0:1:51 1/1:45:40:19:21:41:97.56%:99:9.8874E-23:36:1:1:0:41 1/1:40:48:22:26:49:97.96%:99:1.9625E-27:28:1:1:0:49 1/1:38:38:18:20:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:26:14:12:27:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:36:19:17:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:10:22:34:96.97%:99:4.7095E-18:33:1:0:1:34 1/1:42:42:13:29:42:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:15:19:35:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:38:40:17:23:40:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:42:37:15:22:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:53:24:29:52:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:25:16:9:27:92.59%:99:2.0853E-13:47:2:1:1:27 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:18:21:42:92.86%:99:8.4519E-21:29:3:2:1:42 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:42:17:25:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:33:18:15:35:94.29%:99:5.9366E-18:33:2:0:2:35 1/1:41:32:14:18:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:35:15:20:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:27:10:17:28:96.43%:99:3.7915E-15:37:1:0:1:28 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:32:17:15:33:96.97%:99:4.7095E-18:32:1:0:1:33 1/1:45:39:13:26:40:97.5%:99:3.8137E-22:35:1:0:1:40 1/1:44:25:12:13:27:92.59%:99:2.0853E-13:47:2:0:2:27 1/1:46:20:10:10:21:95.24%:99:4.0873E-11:60:1:0:1:21 1/1:46:27:12:15:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:44:18:26:45:97.78%:99:4.4304E-25:35:1:0:1:45 1/1:41:29:12:17:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:40:22:18:41:97.56%:99:9.8874E-23:33:1:0:1:41 1/1:47:28:14:14:29:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:40:33:18:15:33:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:42:33:18:15:35:97.06%:99:1.2301E-18:60:1:1:0:35 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:30:13:17:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:43 0/1:42:14:7:7:17:87.5%:65:2.5454E-7:38:2:1:1:17 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:25:12:13:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:38:15:23:40:95%:99:8.0088E-21:35:2:1:1:40 1/1:40:26:14:12:26:96.3%:99:1.4382E-14:38:1:1:0:27 1/1:39:27:11:16:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:20:16:37:97.3%:99:2.1762E-20:34:1:1:0:37 1/1:42:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:35:13:22:35:97.22%:99:8.3613E-20:32:1:0:1:36 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:42:16:26:42:97.67%:99:6.6289E-24:35:1:0:1:43 1/1:38:42:18:24:43:97.67%:99:6.6289E-24:35:1:0:1:43 1/1:40:28:12:16:29:93.33%:99:4.194E-15:32:2:1:1:30 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:21:8:13:22:95.45%:99:1.0931E-11:33:1:0:1:23 1/1:38:56:19:37:58:96.55%:99:2.8822E-31:33:2:0:2:58 1/1:38:71:25:46:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:32:12:20:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:52:18:34:51:98.11%:99:8.609E-30:34:1:0:1:53 1/1:36:37:14:23:34:97.37%:99:5.6582E-21:32:1:1:0:38 1/1:38:49:22:27:47:100%:99:3.925E-29:0:0:0:0:49 1/1:36:43:12:31:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:34:14:20:36:94.44%:99:1.5887E-18:32:2:2:0:36 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:39:16:23:39:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:39:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:46:16:30:44:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:37:34:12:22:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:21:10:11:22:95.45%:99:1.0931E-11:34:1:0:1:22 1/1:37:44:19:25:45:95.65%:99:2.7459E-24:34:2:1:1:46 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:46:17:29:47:97.87%:99:2.9526E-26:34:1:0:1:47 1/1:41:44:16:28:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:12:21:35:94.29%:99:5.9366E-18:33:2:1:1:35 1/1:42:35:15:20:36:97.22%:99:8.3613E-20:35:1:0:1:36 1/1:39:36:17:19:35:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:50:22:28:51:98.04%:99:1.3013E-28:31:1:1:0:51 1/1:39:51:26:25:52:96.23%:99:2.3675E-28:34:2:0:2:53 1/1:36:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 2788745 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|plsB2_Rv2482c|gene2536|transcript|Transcript_gene2536|Coding|1/1|c.539G>A|p.Arg180Gln|539/2370|539/2370|180/789||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2788745C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2788745C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:52:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:56:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:35:15:20:36:97.22%:99:8.3613E-20:39:1:1:0:36 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:64:35:29:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:60:31:29:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:35:17:18:36:97.22%:99:8.3613E-20:60:1:0:1:36 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:42:48:31:17:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 2788963 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|plsB2_Rv2482c|gene2536|transcript|Transcript_gene2536|Coding|1/1|c.321A>C|p.Ala107Ala|321/2370|321/2370|107/789||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2788963T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2788963T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:48:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:22:13:9:23:95.65%:99:2.9149E-12:39:1:1:0:23 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:50:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:37:20:17:38:97.37%:99:5.6582E-21:39:1:1:0:38 1/1:46:47:32:15:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:47:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:61:35:26:61:100%:99:2.609E-36:0:0:0:0:63 1/1:43:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:54:36:18:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:52 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:63:28:35:63:100%:99:1.657E-37:0:0:0:0:66 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:44:36:8:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:55:27:28:56:98.21%:99:1.4593E-31:38:1:1:0:56 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 2790458 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|plsC_Rv2483c|gene2537|transcript|Transcript_gene2537|Coding|1/1|c.565G>T|p.Gly189Cys|565/1743|565/1743|189/580||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2790458C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2790458C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:53:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:54:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:47:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:37:15:22:38:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:54:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 2791098 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2484c_Rv2484c|gene2538|transcript|Transcript_gene2538|Coding|1/1|c.1397A>G|p.Asp466Gly|1397/1476|1397/1476|466/491||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2791098T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2791098T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:24:21:3:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:47:31:16:48:97.92%:99:7.6145E-27:34:1:1:0:48 1/1:38:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:36:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:36:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:35:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:44:34:10:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:36:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:35:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:38:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:35:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:34:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:35:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:36:28:8:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 2791475 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2484c_Rv2484c|gene2538|transcript|Transcript_gene2538|Coding|1/1|c.1020C>T|p.Ala340Ala|1020/1476|1020/1476|340/491||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2791475G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2791475G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:50:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:48:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:33:15:18:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:49:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:61:28:33:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:49:31:18:49:100%:99:3.925E-29:0:0:0:0:52 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:37:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:39:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 2794265 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|intergenic_region|MODIFIER|argW_Rvnt28-echA14_Rv2486|gene2540-gene2541|intergenic_region|gene2540-gene2541|||n.2794265G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:54 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:31:15:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:35 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 0/0:0:0:0:0:30:0%:55:1E0:53:30:17:13:30 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:49 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:20:6:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:20 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:38 0/0:0:0:0:0:54:0%:99:1E0:48:54:28:26:55 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 0/0:0:0:0:0:15:0%:29:1E0:44:15:6:9:16 0/0:0:0:0:0:17:0%:33:1E0:47:17:8:9:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:33 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:43 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:38 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:47 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:50:0%:92:1E0:46:50:35:15:51 0/0:0:0:0:0:53:0%:99:1E0:44:53:25:28:53 0/0:0:0:0:0:54:0%:99:1E0:43:54:31:23:54 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:35 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:60:0%:99:1E0:46:60:31:29:60 0/0:0:0:0:0:21:0%:40:1E0:51:21:10:11:21 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:40 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:49 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:39 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:47:37:26:11:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:33 0/0:0:0:0:0:64:0%:99:1E0:45:64:31:33:65 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:37:1:1:0:44:2.27%:69:5E-1:43:43:29:14:44 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:39 0/0:0:0:0:0:38:0%:70:1E0:46:38:24:14:38 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:19:0%:37:1E0:42:19:4:15:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:21:9:30 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:29:0%:55:1E0:50:29:13:16:29 0/0:0:0:0:0:44:0%:81:1E0:42:44:27:17:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:32 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:27:14:42 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:40 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:49 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:34 0/0:0:0:0:0:64:0%:99:1E0:42:64:37:27:65 0/0:0:0:0:0:58:0%:99:1E0:42:58:30:28:58 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:38 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:33 0/0:0:0:0:0:36:0%:66:1E0:38:36:14:22:38 0/0:0:0:0:0:41:0%:78:1E0:38:41:19:22:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:29:13:44 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:38 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:47 0/0:0:0:0:0:31:0%:59:1E0:37:31:15:16:32 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:43 0/0:0:0:0:0:52:0%:96:1E0:38:52:27:25:53 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:17:0%:33:1E0:41:17:9:8:17 0/0:0:0:0:0:31:0%:59:1E0:42:31:23:8:31 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:50 0/0:0:0:0:0:64:0%:99:1E0:44:64:36:28:64 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:43 MTB_anc 2804161 . GC G . PASS AC=2;AF=6.757e-03;AN=296;ANN=G|frameshift_variant|HIGH|PE_PGRS43_Rv2490c|gene2545|transcript|Transcript_gene2545|Coding|1/1|c.2075delG|p.Gly692fs|2075/4983|2075/4983|692/1660||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2804162delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2804162delC||||||;HET=0;LOF=(PE_PGRS43_Rv2490c|gene2545|1|1.00);set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:14:0%:25:1E0:41:14:7:7:14 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:41 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:22 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:42 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:18 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:22 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:16:0%:29:1E0:45:16:5:11:16 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:15 0/0:0:0:0:0:15:0%:29:1E0:46:15:6:9:16 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:21 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:18 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:19 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:36 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:19 0/0:0:0:0:0:25:0%:48:1E0:39:25:8:17:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:26 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:28 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:17:0%:29:1E0:43:16:9:7:17 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:37 0/0:60:1:1:0:39:2.56%:62:5E-1:44:38:17:21:39 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:8:17:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:15:6:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:40 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:38 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:14 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:15:0%:29:1E0:40:15:9:6:15 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:16 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:26:0%:47:1E0:35:26:16:10:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:23 0/0:0:0:0:0:13:0%:25:1E0:46:13:8:5:14 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:40 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:34:0%:63:1E0:41:33:20:13:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:24 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:60:1:0:1:38:2.63%:58:5E-1:41:37:13:24:38 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:41 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:11:0%:22:1E0:52:11:5:6:12 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:29 0/0:38:1:0:1:28:3.57%:41:5E-1:46:27:12:15:28 0/0:0:0:0:0:14:0%:25:1E0:46:14:9:5:15 0/0:0:0:0:0:27:0%:52:1E0:46:27:19:8:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:23 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:21 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:17 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:20 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:16 0/0:0:0:0:0:14:0%:25:1E0:44:14:9:5:14 0/0:0:0:0:0:10:0%:17:1E0:46:10:8:2:11 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:25:0%:48:1E0:46:25:19:6:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:31 0/0:0:0:0:0:16:0%:29:1E0:50:16:7:9:16 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:46 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:37:1:1:0:25:4%:38:5E-1:40:24:11:13:26 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:21:0%:40:1E0:40:21:15:6:22 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:25 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:40 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:29 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:49:0%:93:1E0:40:49:26:23:49 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:36:27:15:12:27 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:19 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:30 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:16 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:24 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:21 0/0:0:0:0:0:22:0%:40:1E0:42:22:5:17:23 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:18 0/0:0:0:0:0:12:0%:21:1E0:41:12:7:5:12 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:23 0/0:0:0:0:0:13:0%:25:1E0:43:13:4:9:13 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 1/1:45:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:19 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:17 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:44 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:37 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 MTB_anc 2806592 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|intergenic_region|MODIFIER|Rv2490a_Rv2490a-Rv2491_Rv2491|gene2546-gene2547|intergenic_region|gene2546-gene2547|||n.2806592T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:43:59:31:28:59 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:24:1:0:1:24:4.17%:34:5E-1:44:23:12:11:24 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:24 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:46 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:62:0%:99:1E0:43:62:29:33:65 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:45:0%:85:1E0:49:45:28:17:48 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:50:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:15:0%:29:1E0:47:15:11:4:15 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:40 0/0:0:0:0:0:39:0%:74:1E0:48:39:20:19:39 0/0:0:0:0:0:59:0%:99:1E0:49:59:31:28:59 0/0:0:0:0:0:52:0%:96:1E0:46:52:26:26:52 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:40 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:23 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:45 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:47 0/0:0:0:0:0:16:0%:29:1E0:45:16:6:10:16 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:32 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:39:0%:74:1E0:47:39:19:20:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:22 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 0/0:0:0:0:0:47:0%:89:1E0:50:47:17:30:47 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:23:10:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:37 0/0:0:0:0:0:85:0%:99:1E0:44:85:38:47:86 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:11:0%:22:1E0:45:11:7:4:12 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:12:0%:21:1E0:48:12:7:5:12 0/0:0:0:0:0:26:0%:47:1E0:52:26:12:14:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:39 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:58:0%:99:1E0:46:58:29:29:58 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:43 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:40:24:17:7:24 0/0:0:0:0:0:20:0%:36:1E0:45:20:15:5:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:40:0%:74:1E0:48:40:20:20:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:27 0/0:0:0:0:0:21:0%:40:1E0:49:21:8:13:22 0/0:0:0:0:0:47:0%:89:1E0:40:47:17:30:47 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:36 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:10:23:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:33:0%:63:1E0:40:33:22:11:35 0/0:0:0:0:0:47:0%:89:1E0:43:47:28:19:48 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:23 0/0:0:0:0:0:68:0%:99:1E0:41:68:34:34:68 0/0:0:0:0:0:46:0%:85:1E0:39:46:28:18:47 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:25 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:47:0%:89:1E0:40:47:20:27:50 0/0:0:0:0:0:43:0%:82:1E0:40:43:29:14:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:47 0/0:0:0:0:0:48:0%:89:1E0:40:48:24:24:48 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:56:0%:99:1E0:41:56:35:21:60 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:59:0%:99:1E0:39:59:29:30:61 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:59:0%:99:1E0:41:59:35:24:59 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:57:0%:99:1E0:44:57:37:20:60 0/0:0:0:0:0:58:0%:99:1E0:43:58:35:23:58 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 MTB_anc 2807486 . A C . PASS AC=298;AF=1.00;AN=298;ANN=C|missense_variant|MODERATE|Rv2492_Rv2492|gene2548|transcript|Transcript_gene2548|Coding|1/1|c.209A>C|p.Asp70Ala|209/753|209/753|70/250||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2807486A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2807486A>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:48:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:51:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:53:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:48:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:29:17:12:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:30:15:15:31:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:49:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:51:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:39:27:12:40:100%:99:3.6742E-23:0:0:0:0:41 1/1:50:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:29:12:17:30:96.67%:99:2.6212E-16:36:1:1:0:32 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:12:19:32:96.88%:99:1.8007E-17:37:1:1:0:35 1/1:43:69:32:37:69:100%:99:4.233E-41:0:0:0:0:70 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:44:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:73:45:28:73:100%:99:1.7006E-43:0:0:0:0:75 1/1:42:61:30:31:61:100%:99:2.609E-36:0:0:0:0:63 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:60:28:32:60:100%:99:1.035E-35:0:0:0:0:65 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:38 1/1:39:57:19:38:57:100%:99:6.4572E-34:0:0:0:0:61 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:51 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:38:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:59 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:38:18:20:39:97.44%:99:1.4697E-21:37:1:0:1:39 1/1:40:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 2808506 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|vapC38_Rv2494|gene2550|transcript|Transcript_gene2550|Coding|1/1|c.197G>C|p.Arg66Pro|197/426|197/426|66/141||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2808506G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2808506G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:17:18:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:38:18:20:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:45:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:20:11:9:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:33:15:18:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:39:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:44:20:24:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:19:22:42:97.62%:99:2.5612E-23:37:1:0:1:44 1/1:45:18:11:7:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:52:26:26:53:98.11%:99:6.3169E-31:0:0:0:0:53 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 2812457 . G C . PASS AC=298;AF=1.00;AN=298;ANN=C|missense_variant|MODERATE|citE_Rv2498c|gene2554|transcript|Transcript_gene2554|Coding|1/1|c.720C>G|p.Ser240Arg|720/822|720/822|240/273||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2812457G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2812457G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:19:21:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:36:29:7:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:35:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:26:13:13:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:34:24:20:4:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:38:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:45:33:12:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:47:36:11:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:29:17:12:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 MTB_anc 2815303 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|accA1_Rv2501c|gene2557|transcript|Transcript_gene2557|Coding|1/1|c.1578C>G|p.Ile526Met|1578/1965|1578/1965|526/654||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2815303G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2815303G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:48 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:53 0/0:0:0:0:0:16:0%:29:1E0:42:16:12:4:16 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:16:0%:29:1E0:48:16:9:7:16 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:46 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:30 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:19 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:22 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:41:0%:78:1E0:40:41:25:16:41 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:59:0%:99:1E0:44:59:32:27:59 0/0:0:0:0:0:46:0%:85:1E0:42:46:30:16:46 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:44 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:42 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:42 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:60:0%:99:1E0:40:60:29:31:62 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:40 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:43 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:60:1:1:0:38:2.63%:58:5E-1:45:37:18:19:38 0/0:0:0:0:0:58:0%:99:1E0:43:58:41:17:60 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:58:0%:99:1E0:41:58:39:19:59 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:40 0/0:0:0:0:0:56:0%:99:1E0:40:56:33:23:56 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:40:0%:74:1E0:40:40:26:14:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:23:9:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:40 0/0:0:0:0:0:36:0%:66:1E0:39:36:22:14:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:16:7:23 0/0:0:0:0:0:59:0%:99:1E0:40:59:34:25:62 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:50:0%:92:1E0:39:50:30:20:50 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:26 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:30 0/0:0:0:0:0:33:0%:63:1E0:40:33:23:10:34 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:24 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:22 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/1:37:7:3:4:28:25%:22:5.1054E-3:44:21:12:9:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:32:1:1:0:29:3.45%:45:5E-1:42:28:15:13:30 0/0:34:1:0:1:33:3.03%:52:5E-1:40:32:17:15:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:12:6:18 0/0:0:0:0:0:25:0%:48:1E0:39:25:20:5:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:33 0/0:0:0:0:0:41:0%:78:1E0:39:41:25:16:42 0/0:0:0:0:0:29:0%:55:1E0:37:29:18:11:30 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:28 0/0:0:0:0:0:20:0%:36:1E0:38:20:13:7:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:33:1:1:0:33:3.03%:52:5E-1:40:32:13:19:33 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:42:0%:77:1E0:39:42:25:17:42 0/0:0:0:0:0:42:0%:77:1E0:38:42:28:14:43 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:39 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:39 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:37 0/0:0:0:0:0:31:0%:59:1E0:39:31:21:10:31 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:43 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:39 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:22 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:45:0%:85:1E0:38:45:26:19:46 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:36:0%:66:1E0:39:36:25:11:37 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:30:11:41 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:34 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:45 0/0:39:1:1:0:24:4.17%:34:5E-1:41:23:13:10:25 MTB_anc 2819009 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|scoB_Rv2503c|gene2559|transcript|Transcript_gene2559|Coding|1/1|c.119C>T|p.Pro40Leu|119/657|119/657|40/218||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2819009G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2819009G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:55:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:48:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:56:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:28 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:25:16:9:26:96.15%:99:5.4444E-14:49:1:0:1:27 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:60:26:34:60:100%:99:1.035E-35:0:0:0:0:62 1/1:47:54:29:25:55:98.18%:99:5.6837E-31:60:1:1:0:58 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:49:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:47 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:38:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:56 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 2821572 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|fadD35_Rv2505c|gene2561|transcript|Transcript_gene2561|Coding|1/1|c.25C>T|p.Pro9Ser|25/1644|25/1644|9/547||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2821572G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2821572G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:48 0/0:0:0:0:0:11:0%:22:1E0:48:11:7:4:11 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:46 0/0:0:0:0:0:36:0%:66:1E0:47:36:14:22:36 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:49:33:18:15:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:36:0%:66:1E0:47:36:23:13:36 0/0:0:0:0:0:41:0%:78:1E0:51:41:18:23:41 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:45 0/0:0:0:0:0:53:0%:99:1E0:41:53:24:29:55 0/0:0:0:0:0:20:0%:36:1E0:48:20:6:14:20 0/0:0:0:0:0:60:0%:99:1E0:47:60:34:26:62 0/0:0:0:0:0:18:0%:32:1E0:38:18:3:15:18 0/0:0:0:0:0:25:0%:48:1E0:49:25:8:17:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:21:0%:40:1E0:46:21:14:7:24 0/0:0:0:0:0:28:0%:51:1E0:49:28:12:16:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:7:22:30 0/0:0:0:0:0:49:0%:93:1E0:46:49:23:26:50 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:33 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:6:21:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:50 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:34 0/0:0:0:0:0:48:0%:89:1E0:44:48:16:32:48 0/0:0:0:0:0:33:0%:63:1E0:47:33:9:24:33 0/0:0:0:0:0:65:0%:99:1E0:48:65:27:38:66 0/0:0:0:0:0:43:0%:82:1E0:47:43:24:19:43 0/0:0:0:0:0:48:0%:89:1E0:46:48:20:28:50 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:42:0%:77:1E0:45:42:27:15:42 0/0:0:0:0:0:29:0%:55:1E0:47:29:18:11:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:49 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:37 0/0:0:0:0:0:51:0%:97:1E0:47:51:24:27:52 0/0:60:1:1:0:31:3.23%:48:5E-1:47:30:21:9:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:45 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:47 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:19:0%:37:1E0:48:19:6:13:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:34 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:9:23:35 0/0:0:0:0:0:58:0%:99:1E0:44:58:29:29:60 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:18 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:42 0/0:0:0:0:0:58:0%:99:1E0:45:58:31:27:58 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:34 0/0:0:0:0:0:19:0%:37:1E0:49:19:7:12:20 0/0:37:1:1:0:22:4.55%:31:5E-1:49:21:9:12:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:36:0%:66:1E0:52:36:16:20:37 0/0:0:0:0:0:26:0%:47:1E0:49:26:8:18:26 0/0:0:0:0:0:43:0%:82:1E0:49:43:18:25:43 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:42 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:43:0%:82:1E0:42:43:13:30:44 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:23 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:38 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:27 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:17:0%:33:1E0:49:17:7:10:17 0/0:0:0:0:0:34:0%:62:1E0:49:34:21:13:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:45 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 1/1:44:57:29:28:63:90.48%:99:1.9864E-29:45:6:3:3:63 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:51:0%:97:1E0:46:51:24:27:52 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:46 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:28 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:38 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:45 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:21 0/0:0:0:0:0:63:0%:99:1E0:41:63:33:30:66 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:36:0%:66:1E0:47:36:11:25:37 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:49 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:53 0/0:0:0:0:0:52:0%:96:1E0:44:52:23:29:53 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:44 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:36 0/0:0:0:0:0:44:0%:81:1E0:46:44:20:24:46 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:30 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:38 0/0:0:0:0:0:55:0%:99:1E0:39:55:22:33:58 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:60:0%:99:1E0:39:60:31:29:61 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:48 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:43 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:38 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:44 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:38 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:48 0/0:0:0:0:0:66:0%:99:1E0:44:66:33:33:67 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 MTB_anc 2822585 . T TC . PASS AC=1;AF=3.650e-03;AN=274;ANN=TC|frameshift_variant|HIGH|Rv2507_Rv2507|gene2563|transcript|Transcript_gene2563|Coding|1/1|c.152dupC|p.Pro52fs|153/822|153/822|51/273||INFO_REALIGN_3_PRIME,TC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2822585_2822586insC||||||,TC|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2822585_2822586insC||||||;HOM=0;LOF=(Rv2507_Rv2507|gene2563|1|1.00);set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:24:1:0:1:18:5.56%:24:5E-1:37:17:16:1:37 0/0:0:0:0:0:14:0%:25:1E0:37:14:12:2:23 0/0:0:0:0:0:23:0%:44:1E0:36:23:13:10:42 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:36:7:6:1:19 0/0:25:2:0:2:19:10.53%:21:2.4324E-1:35:17:15:2:31 0/0:0:0:0:0:13:0%:25:1E0:36:13:10:3:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:26:1:0:1:18:5.56%:24:5E-1:34:17:15:2:29 0/0:0:0:0:0:15:0%:29:1E0:37:15:13:2:29 0/0:0:0:0:0:15:0%:29:1E0:33:15:10:5:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:32:1:0:1:33:3.03%:52:5E-1:36:32:24:8:42 0/0:0:0:0:0:9:0%:18:1E0:35:9:8:1:15 0/0:0:0:0:0:17:0%:33:1E0:35:17:14:3:25 0/0:0:0:0:0:8:0%:14:1E0:32:8:7:1:16 0/0:32:1:0:1:16:6.25%:21:5E-1:34:15:12:3:28 0/0:0:0:0:0:16:0%:29:1E0:35:16:15:1:25 0/0:31:1:0:1:12:8.33%:14:5E-1:34:10:9:1:21 0/0:0:0:0:0:19:0%:37:1E0:35:19:17:2:29 0/0:0:0:0:0:19:0%:37:1E0:36:19:16:3:31 0/0:0:0:0:0:9:0%:18:1E0:36:9:8:1:22 0/0:0:0:0:0:15:0%:29:1E0:36:15:14:1:29 0/0:0:0:0:0:23:0%:44:1E0:36:23:16:7:35 0/0:0:0:0:0:18:0%:32:1E0:37:18:15:3:24 0/0:0:0:0:0:9:0%:18:1E0:33:9:5:4:18 0/0:0:0:0:0:10:0%:17:1E0:34:10:8:2:20 0/0:0:0:0:0:15:0%:29:1E0:33:15:8:7:26 0/0:0:0:0:0:12:0%:21:1E0:35:12:10:2:17 0/0:35:1:0:1:21:4.76%:31:5E-1:37:20:15:5:29 0/0:26:1:0:1:13:7.69%:18:5E-1:34:12:7:5:32 0/0:29:1:0:1:16:6.25%:21:5E-1:37:15:11:4:34 0/0:28:1:0:1:10:10%:11:5E-1:40:9:8:1:19 0/0:26:1:0:1:15:6.67%:21:5E-1:40:14:13:1:22 0/0:0:0:0:0:20:0%:36:1E0:37:20:19:1:29 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:31 0/1:25:10:1:9:34:28.57%:33:4.6276E-4:35:25:21:4:45 0/0:0:0:0:0:23:0%:44:1E0:35:23:20:3:35 0/0:0:0:0:0:24:0%:44:1E0:36:24:24:0:41 0/0:0:0:0:0:23:0%:44:1E0:35:23:19:4:29 0/0:0:0:0:0:23:0%:44:1E0:37:23:17:6:32 0/0:0:0:0:0:11:0%:22:1E0:36:11:10:1:15 0/0:0:0:0:0:14:0%:25:1E0:35:14:10:4:26 0/0:28:2:0:2:20:10%:21:2.4359E-1:37:18:15:3:28 0/0:0:0:0:0:19:0%:37:1E0:37:19:17:2:27 0/0:0:0:0:0:19:0%:37:1E0:35:19:15:4:26 0/0:0:0:0:0:22:0%:40:1E0:37:22:19:3:34 0/0:25:4:0:4:29:13.79%:26:5.5981E-2:36:25:20:5:35 0/0:23:5:0:5:24:20%:17:2.5076E-2:35:20:14:6:32 0/0:0:0:0:0:9:0%:18:1E0:35:9:8:1:15 0/0:0:0:0:0:16:0%:29:1E0:37:16:14:2:27 0/0:0:0:0:0:14:0%:25:1E0:37:14:14:0:25 0/0:28:2:0:2:14:14.29%:12:2.4074E-1:34:12:10:2:21 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:16 0/0:0:0:0:0:19:0%:37:1E0:35:19:14:5:34 0/0:0:0:0:0:20:0%:36:1E0:36:20:16:4:28 0/0:0:0:0:0:10:0%:17:1E0:36:10:10:0:13 0/0:24:1:0:1:16:6.25%:21:5E-1:35:15:12:3:26 0/0:0:0:0:0:14:0%:25:1E0:36:14:12:2:25 0/0:0:0:0:0:15:0%:29:1E0:37:15:13:2:21 0/0:29:1:0:1:10:10%:11:5E-1:35:9:8:1:19 0/0:26:1:0:1:18:5.56%:24:5E-1:36:17:16:1:32 0/0:0:0:0:0:13:0%:25:1E0:33:13:9:4:23 0/0:0:0:0:0:20:0%:36:1E0:35:20:17:3:36 0/0:21:5:0:5:34:14.29%:30:2.6822E-2:36:30:26:4:48 0/0:26:1:0:1:16:6.25%:21:5E-1:36:15:15:0:24 0/0:0:0:0:0:15:0%:29:1E0:36:15:13:2:26 0/0:0:0:0:0:8:0%:14:1E0:35:8:6:2:12 0/0:0:0:0:0:10:0%:17:1E0:37:10:10:0:18 0/0:0:0:0:0:15:0%:29:1E0:35:15:12:3:31 0/0:32:1:0:1:19:5.26%:28:5E-1:36:18:16:2:31 0/0:24:1:0:1:17:5.88%:24:5E-1:37:16:13:3:26 0/0:0:0:0:0:18:0%:32:1E0:36:18:16:2:21 0/0:26:1:0:1:25:4%:38:5E-1:38:24:21:3:37 0/0:0:0:0:0:15:0%:29:1E0:37:15:12:3:22 0/0:0:0:0:0:8:0%:14:1E0:37:8:8:0:12 0/0:32:1:0:1:20:5%:27:5E-1:35:19:17:2:35 0/0:0:0:0:0:14:0%:25:1E0:37:14:12:2:28 0/0:30:1:0:1:14:7.14%:17:5E-1:35:13:12:1:20 0/0:0:0:0:0:16:0%:29:1E0:37:16:14:2:29 0/0:27:1:0:1:23:4.35%:34:5E-1:36:22:19:3:36 0/0:30:1:0:1:21:4.76%:31:5E-1:34:20:16:4:28 0/0:39:1:1:0:12:8.33%:14:5E-1:37:11:9:2:22 0/0:0:0:0:0:11:0%:22:1E0:34:11:8:3:18 0/0:31:1:0:1:20:5%:27:5E-1:36:19:17:2:40 0/0:0:0:0:0:17:0%:33:1E0:36:17:16:1:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:23:0%:44:1E0:34:23:20:3:38 0/0:26:1:0:1:9:11.11%:11:5E-1:35:8:8:0:16 0/0:30:1:0:1:24:4.17%:34:5E-1:35:23:21:2:38 0/0:0:0:0:0:11:0%:22:1E0:37:11:11:0:17 0/0:0:0:0:0:21:0%:40:1E0:35:21:17:4:29 0/0:0:0:0:0:12:0%:21:1E0:35:12:11:1:29 0/0:26:1:0:1:28:3.57%:41:5E-1:36:27:22:5:39 0/0:0:0:0:0:10:0%:17:1E0:33:10:8:2:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:16:0%:29:1E0:36:16:14:2:24 0/0:0:0:0:0:14:0%:25:1E0:35:14:9:5:25 0/0:0:0:0:0:15:0%:29:1E0:36:15:12:3:22 0/0:31:1:0:1:9:11.11%:11:5E-1:36:8:5:3:11 0/0:0:0:0:0:13:0%:25:1E0:38:13:10:3:20 0/0:0:0:0:0:18:0%:32:1E0:35:18:13:5:25 0/0:0:0:0:0:9:0%:18:1E0:35:9:9:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:16:0%:29:1E0:34:16:12:4:25 0/0:0:0:0:0:10:0%:17:1E0:37:10:8:2:19 0/0:0:0:0:0:11:0%:22:1E0:38:11:9:2:21 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:34 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:29 0/0:0:0:0:0:26:0%:47:1E0:36:26:24:2:41 0/0:24:1:0:1:13:7.69%:18:5E-1:34:12:9:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:27:2:0:2:21:9.52%:25:2.439E-1:34:19:13:6:29 0/0:0:0:0:0:16:0%:29:1E0:33:16:10:6:21 0/0:0:0:0:0:16:0%:29:1E0:34:16:13:3:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:28:3:0:3:13:23.08%:9:1.1E-1:34:10:7:3:26 0/0:26:3:0:3:11:27.27%:7:1.0714E-1:35:8:5:3:14 0/0:26:1:0:1:17:5.88%:24:5E-1:37:16:14:2:29 0/0:0:0:0:0:16:0%:29:1E0:36:16:14:2:27 0/0:26:1:0:1:13:7.69%:18:5E-1:36:12:9:3:25 0/0:26:1:0:1:9:11.11%:11:5E-1:35:8:6:2:18 0/0:24:1:0:1:10:10%:11:5E-1:35:9:7:2:20 0/0:0:0:0:0:10:0%:17:1E0:37:10:7:3:20 0/0:26:1:0:1:10:10%:11:5E-1:35:9:5:4:18 0/0:24:1:0:1:9:11.11%:8:5E-1:36:7:7:0:15 0/0:28:1:0:1:9:11.11%:11:5E-1:34:8:8:0:20 0/0:0:0:0:0:10:0%:17:1E0:35:10:9:1:16 0/0:28:1:0:1:12:8.33%:14:5E-1:34:11:8:3:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:34:7:7:0:19 0/0:30:2:0:2:10:20%:7:2.3684E-1:35:8:7:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:26:1:0:1:10:10%:11:5E-1:36:9:8:1:16 0/0:26:2:0:2:19:10.53%:18:2.4286E-1:35:16:13:3:30 0/0:32:1:0:1:12:8.33%:14:5E-1:35:11:9:2:21 0/0:30:1:0:1:13:7.69%:18:5E-1:34:12:11:1:27 0/0:0:0:0:0:18:0%:32:1E0:35:18:17:1:29 0/0:28:2:0:2:17:11.76%:18:2.4242E-1:36:15:13:2:28 0/0:0:0:0:0:14:0%:25:1E0:35:14:13:1:20 0/0:0:0:0:0:16:0%:29:1E0:37:16:16:0:23 0/0:29:3:0:3:14:21.43%:9:1.1111E-1:35:11:10:1:23 0/0:29:2:0:2:21:9.52%:25:2.439E-1:36:19:18:1:30 0/0:0:0:0:0:10:0%:17:1E0:34:10:9:1:20 0/0:0:0:0:0:15:0%:29:1E0:36:15:14:1:23 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:31 0/0:26:1:0:1:18:5.56%:24:5E-1:36:17:15:2:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 2823902 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv2508c_Rv2508c|gene2564|transcript|Transcript_gene2564|Coding|1/1|c.692C>T|p.Pro231Leu|692/1338|692/1338|231/445||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2823902G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2823902G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:44:0%:81:1E0:46:44:27:17:44 0/0:0:0:0:0:13:0%:25:1E0:47:13:8:5:13 0/0:0:0:0:0:23:0%:44:1E0:48:23:14:9:23 0/0:0:0:0:0:41:0%:78:1E0:48:41:17:24:42 0/0:0:0:0:0:32:0%:59:1E0:52:32:15:17:32 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:0:0:0:0:25:0%:48:1E0:51:25:7:18:25 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:52:0%:96:1E0:43:52:21:31:52 0/0:0:0:0:0:17:0%:33:1E0:48:17:6:11:18 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:25:0%:48:1E0:50:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:25 0/0:0:0:0:0:43:0%:82:1E0:49:43:23:20:44 0/0:0:0:0:0:34:0%:62:1E0:49:34:15:19:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:52:1:0:1:28:3.57%:41:5E-1:44:27:9:18:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:7:19:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:38:0%:70:1E0:50:38:14:24:39 0/0:38:1:1:0:32:3.12%:48:5E-1:45:31:17:14:32 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:49:0%:93:1E0:47:49:24:25:49 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:51 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:41:0%:78:1E0:48:41:15:26:43 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:46 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:38 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:47 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:39 0/0:0:0:0:0:26:0%:47:1E0:50:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:39 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:11:26:37 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:54 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:51:0%:97:1E0:45:51:17:34:51 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:44 0/0:0:0:0:0:33:0%:63:1E0:48:33:11:22:33 0/0:0:0:0:0:42:0%:77:1E0:50:42:17:25:42 0/0:0:0:0:0:55:0%:99:1E0:47:55:26:29:55 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 0/0:0:0:0:0:36:0%:66:1E0:48:36:22:14:36 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:21 0/0:0:0:0:0:35:0%:67:1E0:48:35:15:20:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:45 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:35 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:46 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:41 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:9:19:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:22 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:19:0%:37:1E0:52:19:9:10:19 0/0:0:0:0:0:52:0%:96:1E0:42:52:29:23:52 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:27:0%:52:1E0:44:27:5:22:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:28 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:17 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:64:0%:99:1E0:43:64:35:29:64 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:38 0/0:0:0:0:0:51:0%:97:1E0:43:51:28:23:51 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:33 0/0:0:0:0:0:49:0%:93:1E0:43:49:21:28:50 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:57:0%:99:1E0:40:57:32:25:61 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:43 0/0:0:0:0:0:46:0%:85:1E0:41:46:29:17:46 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:26 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:43 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:52 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:50 MTB_anc 2825466 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv2509_Rv2509|gene2565|transcript|Transcript_gene2565|Coding|1/1|c.789A>G|p.Lys263Lys|789/807|789/807|263/268||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2825466A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2825466A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:52:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:54:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:50:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:52:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:14:13:28:96.43%:99:3.7915E-15:34:1:1:0:28 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:60:31:29:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:45:19:26:47:95.74%:99:1.1441E-25:60:1:1:0:49 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:36:16:20:37:97.3%:99:2.2598E-21:0:0:0:0:39 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:52:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:55:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:66:31:35:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 MTB_anc 2828822 . G T . PASS AC=8;AF=0.286;AN=28;ANN=T|missense_variant|MODERATE|Rv2512c_Rv2512c|gene2569|transcript|Transcript_gene2569|Coding|1/1|c.982C>A|p.Gln328Lys|982/1248|982/1248|328/415||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2828822G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2828822G>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:8:0%:14:1E0:38:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:36:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:23:0%:44:1E0:36:23:0:23:23 0/0:0:0:0:0:7:0%:14:1E0:37:7:1:6:7 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:10 0/0:0:0:0:0:7:0%:14:1E0:38:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:7 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 2829779 . T C . PASS AC=283;AF=0.990;AN=286;ANN=C|missense_variant|MODERATE|Rv2512c_Rv2512c|gene2569|transcript|Transcript_gene2569|Coding|1/1|c.25A>G|p.Thr9Ala|25/1248|25/1248|9/415||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2829779T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2829779T>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:52:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:47:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:46:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:46:12:5:7:13:92.31%:58:1.3461E-6:38:1:1:0:13 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:19:10:9:20:95%:98:1.5234E-10:33:1:1:0:20 1/1:44:18:9:9:19:94.74%:92:5.6585E-10:60:1:0:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:51:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:13:7:6:14:92.86%:64:3.7391E-7:35:1:1:0:14 1/1:37:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:9:7:2:10:90%:42:5.9538E-5:24:1:1:0:10 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 0/1:46:17:9:8:20:85%:78:1.2848E-8:52:3:3:0:22 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:45:17:10:7:19:89.47%:82:5.9414E-9:38:2:2:0:21 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:50:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:21:9:12:22:95.45%:99:1.0931E-11:38:1:1:0:22 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:51:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:12:5:7:13:92.31%:58:1.3461E-6:32:1:1:0:13 0/1:40:11:4:7:13:84.62%:49:1.0096E-5:49:2:2:0:13 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:48:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:13:6:7:14:92.86%:64:3.7391E-7:29:1:0:1:14 1/1:47:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:43:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 MTB_anc 2841022 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|fas_Rv2524c|gene2583|transcript|Transcript_gene2583|Coding|1/1|c.8311C>T|p.Arg2771Cys|8311/9210|8311/9210|2771/3069||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2841022G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2841022G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:50:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:60:27:33:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:27:16:11:28:96.43%:99:3.7915E-15:37:1:0:1:29 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:37:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:36:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:53:25:28:54:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 2847281 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|fas_Rv2524c|gene2583|transcript|Transcript_gene2583|Coding|1/1|c.2052C>T|p.Asp684Asp|2052/9210|2052/9210|684/3069||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2847281G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2847281G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:56:17:39:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:44:11:33:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:44:12:32:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:44:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:64:24:40:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:39:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:48:16:32:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:38:10:28:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:48:18:30:48:100%:99:1.554E-28:0:0:0:0:51 1/1:38:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:41:17:24:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 MTB_anc 2849310 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|fas_Rv2524c|gene2583|transcript|Transcript_gene2583|Coding|1/1|c.23G>A|p.Arg8Gln|23/9210|23/9210|8/3069||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2849310C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.2849310C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:42:47:17:30:47 0/0:0:0:0:0:17:0%:33:1E0:47:17:6:11:17 0/0:0:0:0:0:59:0%:99:1E0:44:59:21:38:60 0/0:0:0:0:0:39:0%:74:1E0:45:39:11:28:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:35 0/0:0:0:0:0:45:0%:85:1E0:46:45:23:22:47 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:39:0%:74:1E0:48:39:17:22:39 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:44 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:46 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:52:0%:96:1E0:43:52:22:30:53 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:8:19:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:58:0%:99:1E0:42:58:25:33:59 0/0:0:0:0:0:24:0%:44:1E0:49:24:8:16:24 0/0:0:0:0:0:42:0%:77:1E0:46:42:17:25:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:51:0%:97:1E0:47:51:29:22:51 0/0:0:0:0:0:46:0%:85:1E0:44:46:14:32:46 0/0:0:0:0:0:46:0%:85:1E0:37:46:19:27:47 0/0:0:0:0:0:53:0%:99:1E0:48:53:13:40:55 0/0:0:0:0:0:48:0%:89:1E0:46:48:15:33:48 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:16:29:45 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:37:1:0:1:44:2.27%:69:5E-1:42:43:16:27:45 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:42 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:49 0/0:0:0:0:0:48:0%:89:1E0:42:48:16:32:48 0/0:0:0:0:0:48:0%:89:1E0:49:48:21:27:48 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:38:1:0:1:45:2.22%:73:5E-1:43:44:21:23:45 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:41 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:48:0%:89:1E0:42:48:15:33:49 0/0:0:0:0:0:48:0%:89:1E0:44:48:18:30:48 0/0:0:0:0:0:29:0%:55:1E0:48:29:9:20:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:46 0/0:0:0:0:0:51:0%:97:1E0:46:51:17:34:52 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:38:0%:70:1E0:44:38:12:26:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:53:0%:99:1E0:47:53:24:29:54 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:14:0%:25:1E0:46:14:4:10:15 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:42 0/0:0:0:0:0:38:0%:70:1E0:49:38:14:24:38 0/0:0:0:0:0:24:0%:44:1E0:44:24:5:19:24 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:35 0/0:0:0:0:0:28:0%:51:1E0:39:28:9:19:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:32:0%:59:1E0:49:32:14:18:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:39 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:48 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:0:0:0:0:35:0%:67:1E0:48:35:12:23:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:36:0%:66:1E0:40:36:9:27:36 0/0:60:1:0:1:36:2.78%:55:5E-1:42:35:20:15:36 0/0:0:0:0:0:24:0%:44:1E0:51:24:10:14:24 0/0:0:0:0:0:44:0%:81:1E0:45:44:17:27:44 0/0:0:0:0:0:20:0%:36:1E0:46:20:5:15:20 0/0:60:1:0:1:35:2.86%:55:5E-1:47:34:13:21:35 0/0:0:0:0:0:36:0%:66:1E0:48:36:16:20:36 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:11:23:34 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:45 0/0:0:0:0:0:22:0%:40:1E0:45:22:7:15:22 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:47 0/0:38:1:0:1:26:3.85%:38:5E-1:43:25:13:12:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:14:22:37 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:60:1:0:1:33:3.03%:52:5E-1:42:32:13:19:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:8:28:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:30 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:49 0/0:0:0:0:0:23:0%:44:1E0:40:23:7:16:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/1:38:22:6:16:35:62.86%:87:1.7197E-9:42:13:3:10:36 0/1:41:27:14:13:71:38.03%:94:3.4721E-10:43:44:17:27:71 0/0:60:1:1:0:62:1.61%:99:5E-1:41:61:26:35:62 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:18 0/0:0:0:0:0:49:0%:93:1E0:41:49:21:28:53 0/0:0:0:0:0:39:0%:74:1E0:43:39:13:26:41 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:54 0/0:0:0:0:0:39:0%:74:1E0:38:39:16:23:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:15:29:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:32 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:43 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:40 0/0:0:0:0:0:53:0%:99:1E0:41:53:22:31:53 0/0:0:0:0:0:42:0%:77:1E0:38:42:24:18:42 0/0:0:0:0:0:45:0%:85:1E0:38:45:19:26:45 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:39:1:0:1:51:1.96%:84:5E-1:38:50:22:28:52 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:42 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:50 0/0:36:1:0:1:49:2.04%:80:5E-1:39:48:15:33:49 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:46 0/0:0:0:0:0:49:0%:93:1E0:46:49:25:24:49 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:44 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:38:1:0:1:47:2.13%:77:5E-1:47:46:18:28:47 0/0:0:0:0:0:41:0%:78:1E0:47:41:13:28:42 0/0:0:0:0:0:59:0%:99:1E0:42:59:21:38:60 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 MTB_anc 2858669 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|nusB_Rv2533c|gene2593|transcript|Transcript_gene2593|Coding|1/1|c.56A>C|p.Asp19Ala|56/471|56/471|19/156||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2858669T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.2858669T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:49:19:30:49:100%:99:3.925E-29:0:0:0:0:52 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:32:13:19:33:96.97%:99:4.7095E-18:60:1:1:0:33 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:24:14:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:51:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:68:35:33:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:56:32:24:57:98.25%:99:3.7452E-32:39:1:1:0:61 1/1:45:39:17:22:40:97.5%:99:3.8137E-22:39:1:1:0:41 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:54:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:53:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:30:11:19:31:96.77%:99:6.8754E-17:38:1:0:1:31 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:49:20:29:49:100%:99:3.925E-29:0:0:0:0:52 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:61 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:61 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:52 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2866503 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.36G>A|p.Pro12Pro|36/660|36/660|12/219||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866503G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866503G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:0:1:46:2.17%:73:5E-1:44:45:21:24:47 0/0:0:0:0:0:19:0%:37:1E0:52:19:10:9:19 0/0:0:0:0:0:57:0%:99:1E0:47:57:27:30:57 0/0:60:1:0:1:38:2.63%:58:5E-1:45:37:13:24:38 0/0:39:1:1:0:31:3.23%:48:5E-1:43:30:17:13:31 0/0:38:1:1:0:43:2.33%:70:5E-1:42:42:23:19:43 0/0:0:0:0:0:34:0%:62:1E0:49:34:12:22:35 0/0:39:1:1:0:33:3.03%:52:5E-1:44:32:16:16:33 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 0/0:60:1:1:0:37:2.7%:59:5E-1:48:36:19:17:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:26:11:38 0/0:34:2:2:0:38:5.26%:50:2.4667E-1:43:36:21:15:38 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:60:1:1:0:52:1.92%:83:5E-1:44:51:29:22:52 0/0:39:1:1:0:29:3.45%:45:5E-1:43:28:16:12:29 0/0:39:1:1:0:39:2.56%:62:5E-1:44:38:24:14:39 0/0:39:1:1:0:28:3.57%:41:5E-1:46:27:14:13:28 0/0:37:1:1:0:26:3.85%:38:5E-1:44:25:15:10:26 0/0:37:1:1:0:30:3.33%:44:5E-1:44:29:15:14:30 0/0:60:1:0:1:20:5%:27:5E-1:49:19:9:10:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:50 0/0:0:0:0:0:34:0%:62:1E0:49:34:17:17:35 0/0:37:1:0:1:38:2.63%:59:5E-1:46:36:12:24:39 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:60:2:1:1:27:7.41%:34:2.4528E-1:51:25:12:13:27 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:60:2:0:2:31:6.45%:40:2.459E-1:42:29:13:16:31 0/0:43:3:2:1:28:10.71%:28:1.1818E-1:46:25:13:12:28 0/0:53:3:0:3:34:8.82%:37:1.194E-1:45:31:17:14:34 0/0:0:0:0:0:30:0%:55:1E0:51:30:17:13:31 0/0:37:1:1:0:30:3.33%:44:5E-1:42:29:16:13:30 0/0:60:1:0:1:39:2.56%:62:5E-1:47:38:18:20:39 0/0:39:1:0:1:39:2.56%:62:5E-1:46:38:20:18:40 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:43 0/0:0:0:0:0:58:0%:99:1E0:47:58:29:29:58 0/0:60:2:0:2:40:5%:53:2.4684E-1:44:38:26:12:40 0/0:0:0:0:0:47:0%:89:1E0:47:47:21:26:48 0/0:49:2:1:1:27:7.41%:34:2.4528E-1:43:25:9:16:27 0/0:52:3:2:1:44:6.82%:53:1.2069E-1:45:41:24:17:44 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:28 0/0:38:1:1:0:29:3.45%:45:5E-1:48:28:13:15:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:43:0%:82:1E0:46:43:25:18:44 0/0:60:1:1:0:28:3.57%:41:5E-1:42:27:16:11:28 0/0:46:2:0:2:36:5.56%:47:2.4648E-1:44:34:14:20:36 0/1:47:7:2:5:59:11.86%:21:6.4707E-3:47:52:29:23:59 0/0:60:1:1:0:45:2.22%:73:5E-1:44:44:22:22:45 0/0:60:1:0:1:16:6.25%:21:5E-1:50:15:12:3:16 0/0:44:2:0:2:34:5.88%:43:2.4627E-1:44:32:14:18:34 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:35:2:2:0:36:5.56%:47:2.4648E-1:43:34:20:14:38 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:32 0/0:39:1:1:0:34:2.94%:51:5E-1:45:33:14:19:35 0/0:60:2:0:2:28:7.14%:34:2.4545E-1:40:26:13:13:28 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:40 0/0:38:1:1:0:40:2.5%:62:5E-1:47:39:23:16:40 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:38 0/0:60:1:1:0:31:3.23%:48:5E-1:44:30:17:13:31 0/0:34:1:1:0:51:1.96%:84:5E-1:44:50:28:22:51 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:38:1:1:0:56:1.79%:91:5E-1:45:55:30:25:56 0/0:43:4:2:2:29:13.79%:26:5.5981E-2:45:25:16:9:29 0/0:38:1:1:0:40:2.5%:62:5E-1:46:39:20:19:40 0/0:60:1:1:0:26:3.85%:38:5E-1:51:25:15:10:26 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:60:1:1:0:45:2.22%:73:5E-1:47:44:21:23:45 0/0:60:1:1:0:32:3.12%:48:5E-1:52:31:14:17:32 0/0:0:0:0:0:18:0%:32:1E0:49:18:14:4:20 0/0:0:0:0:0:30:0%:55:1E0:52:30:15:15:31 0/0:36:2:2:0:33:6.06%:44:2.4615E-1:42:31:14:17:33 0/0:46:2:2:0:28:7.14%:34:2.4545E-1:42:26:12:14:28 0/0:37:2:2:0:25:8%:31:2.449E-1:44:23:13:10:25 0/0:34:2:2:0:34:6.06%:44:2.4615E-1:46:31:17:14:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:49:2:1:1:31:6.45%:40:2.459E-1:46:29:17:12:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:44:0%:81:1E0:46:44:16:28:44 0/0:39:1:1:0:23:4.35%:34:5E-1:48:22:11:11:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:60:1:0:1:36:2.78%:55:5E-1:40:35:14:21:37 0/0:49:2:0:2:27:7.41%:34:2.4528E-1:42:25:9:16:27 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:22:10:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:37:1:0:1:40:2.5%:62:5E-1:45:39:23:16:40 0/0:60:2:1:1:23:8.7%:28:2.4444E-1:47:21:14:7:24 0/0:37:3:3:0:43:6.98%:53:1.2059E-1:39:40:24:16:44 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:34 0/0:0:0:0:0:44:0%:81:1E0:46:44:19:25:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:33 0/0:37:1:0:1:33:3.03%:52:5E-1:45:32:16:16:33 0/0:51:1:0:1:32:3.12%:48:5E-1:46:31:12:19:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:39:1:1:0:51:1.96%:84:5E-1:46:50:26:24:53 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:28 0/0:38:2:2:0:37:5.41%:50:2.4658E-1:45:35:15:20:37 0/0:39:1:1:0:34:2.94%:51:5E-1:39:33:18:15:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:23 0/0:37:1:1:0:31:3.23%:48:5E-1:48:30:19:11:31 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:39 0/0:48:2:1:1:38:5.26%:50:2.4667E-1:47:36:14:22:38 0/0:38:2:2:0:26:7.69%:30:2.451E-1:47:24:14:10:26 0/0:32:1:1:0:31:3.23%:48:5E-1:47:30:14:16:31 0/0:38:1:1:0:29:3.45%:45:5E-1:44:28:14:14:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:60:1:0:1:35:2.86%:55:5E-1:41:34:18:16:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:33 0/0:0:0:0:0:39:0%:74:1E0:38:39:22:17:39 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:24 0/0:33:1:1:0:45:2.22%:73:5E-1:42:44:21:23:45 0/0:38:2:2:0:39:5.13%:54:2.4675E-1:42:37:14:23:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:36 0/0:31:2:1:1:48:4.17%:67:2.4737E-1:41:46:21:25:50 0/0:34:1:1:0:35:2.86%:55:5E-1:41:34:23:11:36 0/0:37:3:3:0:45:6.67%:56:1.2079E-1:43:42:19:23:48 0/0:38:1:1:0:35:2.86%:55:5E-1:41:34:15:19:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:35 0/0:36:3:2:1:30:10%:31:1.1864E-1:42:27:14:13:31 0/0:38:2:2:0:27:7.41%:34:2.4528E-1:41:25:10:15:27 0/0:39:1:1:0:28:3.57%:41:5E-1:42:27:12:15:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:60:1:0:1:35:2.86%:55:5E-1:42:34:14:20:35 0/0:38:2:2:0:47:4.26%:67:2.4731E-1:39:45:22:23:47 0/0:39:2:1:1:35:5.71%:47:2.4638E-1:42:33:14:19:35 0/0:38:1:1:0:48:2.08%:76:5E-1:42:47:25:22:48 0/0:37:1:1:0:36:2.78%:55:5E-1:43:35:15:20:36 0/0:39:1:1:0:38:2.63%:58:5E-1:45:37:15:22:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:39:1:1:0:29:3.45%:45:5E-1:41:28:15:13:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:39:1:1:0:31:3.23%:48:5E-1:43:30:14:16:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:54:0%:99:1E0:43:54:19:35:54 0/0:60:1:0:1:41:2.44%:66:5E-1:42:40:16:24:42 MTB_anc 2866551 . C G . PASS AC=8;AF=0.027;AN=300;ANN=G|synonymous_variant|LOW|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.84C>G|p.Ala28Ala|84/660|84/660|28/219||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866551C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866551C>G||||||;HOM=0;NC=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:2:0:2:54:3.7%:77:2.4766E-1:45:52:25:27:54 0/0:60:1:1:0:20:5%:27:5E-1:53:19:8:11:20 0/0:43:4:3:1:60:6.67%:71:5.9362E-2:47:56:27:29:60 0/1:50:7:4:3:42:16.67%:22:5.9563E-3:44:35:13:22:42 0/0:43:6:3:3:39:15.38%:31:1.2702E-2:41:33:18:15:39 0/0:35:3:2:1:40:7.5%:46:1.2025E-1:45:37:19:18:40 0/0:60:1:0:1:38:2.63%:58:5E-1:49:37:15:22:39 0/0:40:4:3:1:33:12.12%:32:5.6777E-2:45:29:14:15:34 0/1:50:11:6:5:46:23.91%:36:2.4819E-4:51:35:20:15:47 0/0:60:2:1:1:35:5.71%:47:2.4638E-1:48:33:17:16:36 0/0:60:2:2:0:42:4.76%:57:2.4699E-1:46:40:22:18:43 0/0:48:6:5:1:39:15.38%:31:1.2702E-2:43:33:18:15:39 0/0:60:4:4:0:26:15.38%:20:5.5222E-2:50:22:10:12:26 0/0:52:6:5:1:60:10%:59:1.3706E-2:46:54:28:26:60 0/0:60:3:3:0:26:11.54%:25:1.1765E-1:42:23:15:8:27 0/0:48:4:2:2:43:9.3%:47:5.8115E-2:46:39:26:13:44 0/0:38:1:1:0:27:3.7%:41:5E-1:50:26:14:12:27 0/0:48:4:3:1:29:13.79%:26:5.5981E-2:44:25:15:10:29 0/0:34:3:2:1:29:10.34%:31:1.1842E-1:45:26:14:12:31 0/0:60:3:2:1:25:12%:25:1.1735E-1:46:22:12:10:26 0/0:35:1:1:0:24:4.17%:34:5E-1:45:23:13:10:25 0/0:52:4:4:0:43:9.3%:47:5.8115E-2:45:39:22:17:44 0/0:60:2:1:1:33:6.06%:44:2.4615E-1:49:31:15:16:34 0/0:60:2:0:2:35:5.71%:47:2.4638E-1:47:33:10:23:36 0/0:54:4:2:2:28:14.29%:23:5.5746E-2:40:24:10:14:29 0/0:37:2:0:2:33:6.06%:44:2.4615E-1:44:31:19:12:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:44:3:3:0:28:10.71%:28:1.1818E-1:48:25:14:11:28 0/0:37:2:0:2:30:6.67%:37:2.4576E-1:49:28:14:14:31 0/0:52:3:1:2:36:8.33%:40:1.1972E-1:44:33:14:19:37 0/1:55:8:4:4:37:21.62%:25:2.5617E-3:43:29:15:14:40 0/0:46:5:2:3:33:15.15%:27:2.6557E-2:44:28:18:10:33 0/0:60:1:1:0:32:3.12%:48:5E-1:51:31:19:12:32 0/0:52:3:2:1:32:9.38%:34:1.1905E-1:42:29:13:16:33 0/0:60:3:1:2:48:6.25%:59:1.2105E-1:49:45:21:24:49 0/0:43:3:2:1:40:7.5%:46:1.2025E-1:47:37:20:17:40 0/0:60:2:1:1:47:4.26%:67:2.4731E-1:46:45:21:24:48 0/0:42:3:1:2:57:5.26%:76:1.2168E-1:49:54:27:27:57 0/0:60:3:1:2:39:7.69%:47:1.2013E-1:44:36:24:12:39 0/0:36:2:1:1:49:4.08%:71:2.4742E-1:46:47:20:27:50 0/0:45:3:2:1:27:11.11%:28:1.1792E-1:42:24:9:15:27 0/0:55:5:2:3:44:11.36%:41:2.7721E-2:44:39:20:19:44 0/0:42:3:1:2:32:9.38%:34:1.1905E-1:41:29:16:13:32 0/0:48:4:3:1:31:12.9%:29:5.6405E-2:50:27:13:14:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:48:4:3:1:41:9.76%:44:5.79E-2:47:37:18:19:43 0/0:60:3:2:1:29:10.34%:31:1.1842E-1:45:26:16:10:29 0/1:41:8:5:3:46:17.39%:25:2.8033E-3:47:38:16:22:46 0/1:50:9:4:5:63:14.29%:28:1.4373E-3:46:54:28:26:63 0/0:60:2:1:1:46:4.35%:63:2.4725E-1:48:44:20:24:47 0/0:52:3:1:2:25:12%:25:1.1735E-1:49:22:16:6:26 0/0:52:6:1:5:38:15.79%:28:1.2628E-2:45:32:19:13:39 0/0:60:1:0:1:23:4.35%:34:5E-1:46:22:12:10:23 0/0:45:3:3:0:37:8.11%:43:1.1986E-1:43:34:19:15:38 0/0:48:2:1:1:34:5.88%:43:2.4627E-1:41:32:14:18:34 0/0:37:2:2:0:35:5.71%:47:2.4638E-1:44:33:15:18:36 0/0:48:2:0:2:33:6.06%:44:2.4615E-1:40:31:16:15:34 0/0:60:3:0:3:30:10%:31:1.1864E-1:46:27:10:17:30 0/0:37:1:0:1:44:2.27%:69:5E-1:41:43:28:15:46 0/0:52:6:4:2:49:12.24%:44:1.3285E-2:47:43:21:22:51 0/0:49:2:0:2:40:5%:53:2.4684E-1:47:38:19:19:41 0/0:60:3:3:0:25:12%:25:1.1735E-1:43:22:12:10:26 0/0:38:1:1:0:45:2.22%:73:5E-1:45:44:23:21:45 0/0:30:1:1:0:37:2.7%:59:5E-1:46:36:21:15:38 0/0:60:4:3:1:44:9.09%:46:5.8215E-2:46:40:22:18:44 0/0:52:3:3:0:55:5.45%:73:1.2156E-1:46:52:32:20:55 0/0:45:3:1:2:32:9.38%:34:1.1905E-1:47:29:17:12:33 0/0:48:2:2:0:43:4.65%:60:2.4706E-1:46:41:20:21:43 0/0:63:4:3:1:32:12.5%:29:5.6596E-2:47:28:16:12:33 0/0:42:4:3:1:27:14.81%:23:5.5494E-2:46:23:11:12:28 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:44 0/0:60:5:2:3:42:11.9%:38:2.7555E-2:52:37:18:19:42 0/0:60:1:0:1:16:6.25%:21:5E-1:49:15:9:6:16 0/0:60:1:1:0:23:4.35%:34:5E-1:50:22:12:10:23 0/0:38:1:1:0:33:3.03%:52:5E-1:44:32:14:18:33 0/0:51:5:4:1:31:16.13%:24:2.6257E-2:44:26:11:15:32 0/0:37:3:2:1:24:12.5%:22:1.1702E-1:43:21:14:7:24 0/0:35:3:3:0:33:9.09%:37:1.1923E-1:49:30:16:14:33 0/0:49:2:1:1:29:6.9%:37:2.4561E-1:42:27:16:11:29 0/0:45:3:2:1:32:9.38%:34:1.1905E-1:44:29:16:13:32 0/0:48:2:0:2:29:6.9%:37:2.4561E-1:42:27:14:13:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:0:0:0:0:43:0%:82:1E0:46:43:15:28:45 0/0:38:1:1:0:23:4.35%:34:5E-1:51:22:11:11:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:42:3:1:2:42:7.14%:49:1.2048E-1:43:39:13:26:43 0/0:49:2:1:1:29:6.9%:37:2.4561E-1:43:27:8:19:30 0/0:37:1:0:1:25:4%:38:5E-1:46:24:12:12:25 0/0:0:0:0:0:31:0%:59:1E0:49:31:21:10:31 0/0:60:3:2:1:28:10.71%:28:1.1818E-1:49:25:14:11:28 0/0:48:2:1:1:40:5%:53:2.4684E-1:47:38:23:15:40 0/0:60:3:1:2:22:13.64%:19:1.1628E-1:46:19:11:8:22 0/0:41:5:5:0:42:11.9%:38:2.7555E-2:40:37:18:19:42 0/0:38:1:1:0:33:3.03%:52:5E-1:49:32:16:16:33 0/0:38:1:1:0:44:2.27%:69:5E-1:48:43:18:25:45 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:27 0/0:40:5:2:3:34:14.71%:27:2.6693E-2:45:29:16:13:34 0/0:60:4:3:1:36:11.11%:34:5.7257E-2:45:32:15:17:36 0/0:38:1:1:0:31:3.23%:48:5E-1:43:30:16:14:33 0/0:38:1:1:0:47:2.13%:77:5E-1:44:46:24:22:49 0/0:34:1:1:0:28:3.57%:41:5E-1:47:27:14:13:28 0/0:40:6:5:1:39:15.38%:31:1.2702E-2:42:33:13:20:39 0/0:36:2:2:0:34:5.88%:43:2.4627E-1:42:32:17:15:37 0/0:42:4:4:0:40:10%:40:5.7784E-2:43:36:16:20:40 0/0:33:4:4:0:27:14.81%:23:5.5494E-2:45:23:13:10:27 0/0:44:3:2:1:35:8.57%:40:1.1957E-1:45:32:17:15:36 0/0:45:5:1:4:35:14.29%:30:2.6822E-2:46:30:18:12:35 0/0:60:2:1:1:42:4.76%:57:2.4699E-1:42:40:23:17:42 0/0:46:5:3:2:39:12.82%:35:2.7273E-2:50:34:14:20:41 0/0:41:6:6:0:31:19.35%:20:1.1977E-2:46:25:16:9:31 0/0:45:3:3:0:35:8.57%:40:1.1957E-1:45:32:15:17:35 0/0:47:4:3:1:33:12.12%:32:5.6777E-2:46:29:14:15:34 0/0:36:2:2:0:35:5.71%:47:2.4638E-1:42:33:18:15:36 0/0:46:5:4:1:39:12.82%:35:2.7273E-2:41:34:19:15:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:34 0/0:37:2:2:0:39:5.13%:54:2.4675E-1:41:37:21:16:42 0/1:37:7:5:2:45:15.56%:22:6.0738E-3:38:38:20:18:46 0/0:49:2:2:0:35:5.71%:47:2.4638E-1:44:33:15:18:36 0/0:36:1:1:0:25:4%:38:5E-1:42:24:12:12:26 0/0:36:3:3:0:46:6.52%:56:1.2088E-1:43:43:23:20:47 0/0:38:4:3:1:36:11.11%:34:5.7257E-2:45:32:11:21:37 0/0:44:3:2:1:36:8.33%:40:1.1972E-1:46:33:17:16:37 0/0:60:1:1:0:35:2.86%:55:5E-1:39:34:17:17:35 0/0:36:4:2:2:51:7.84%:59:5.8806E-2:41:47:19:28:52 0/0:35:3:3:0:40:7.5%:46:1.2025E-1:40:37:23:14:40 0/0:42:6:4:2:43:13.95%:36:1.2967E-2:41:37:17:20:43 0/0:37:4:4:0:43:9.3%:47:5.8115E-2:39:39:18:21:43 0/0:46:2:0:2:39:5.13%:54:2.4675E-1:41:37:16:21:39 0/0:38:2:2:0:40:5%:53:2.4684E-1:41:38:19:19:41 0/0:38:2:2:0:45:4.44%:64:2.4719E-1:45:43:27:16:46 0/0:35:2:2:0:34:5.88%:43:2.4627E-1:40:32:13:19:35 0/0:37:4:3:1:31:12.9%:29:5.6405E-2:43:27:13:14:34 0/1:34:7:7:0:37:18.92%:22:5.721E-3:40:30:12:18:38 0/1:36:7:6:1:36:19.44%:22:5.6667E-3:42:29:14:15:38 0/0:37:2:2:0:37:5.41%:50:2.4658E-1:42:35:20:15:37 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:42:34:12:22:36 0/0:40:5:5:0:50:10%:49:2.8142E-2:40:45:21:24:51 0/0:45:3:3:0:41:7.32%:50:1.2037E-1:45:38:13:25:41 0/0:41:5:4:1:49:10.2%:50:2.8079E-2:43:44:24:20:52 0/0:45:3:3:0:40:7.5%:46:1.2025E-1:43:37:17:20:40 0/0:38:2:2:0:42:4.76%:57:2.4699E-1:44:40:18:22:44 0/0:60:1:0:1:31:3.23%:48:5E-1:43:30:17:13:32 0/0:38:2:2:0:30:6.67%:37:2.4576E-1:44:28:14:14:30 0/0:60:2:1:1:38:5.26%:50:2.4667E-1:42:36:20:16:38 0/0:37:4:3:1:31:12.9%:26:5.62E-2:42:26:13:13:32 0/0:49:2:1:1:27:7.41%:34:2.4528E-1:40:25:13:12:27 0/0:49:2:1:1:32:6.25%:40:2.4603E-1:41:30:15:15:32 0/0:52:3:1:2:43:6.98%:53:1.2059E-1:41:40:24:16:44 0/0:60:3:1:2:55:5.45%:73:1.2156E-1:42:52:19:33:56 0/0:50:3:2:1:46:6.52%:56:1.2088E-1:43:43:18:25:46 MTB_anc 2866569 . C A . PASS AC=14;AF=0.047;AN=300;ANN=A|synonymous_variant|LOW|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.102C>A|p.Thr34Thr|102/660|102/660|34/219||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866569C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866569C>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:2:0:2:53:3.77%:78:2.4762E-1:45:51:26:25:55 0/0:60:1:1:0:19:5.26%:28:5E-1:52:18:9:9:19 0/0:43:4:3:1:61:6.56%:75:5.9414E-2:47:57:28:29:61 0/1:50:7:4:3:44:15.91%:22:6.0363E-3:44:37:15:22:44 0/0:44:6:3:3:35:17.14%:25:1.238E-2:43:29:16:13:35 0/0:38:4:2:2:37:10.81%:38:5.7399E-2:46:33:16:17:37 0/0:60:2:0:2:37:5.41%:50:2.4658E-1:49:35:15:20:37 0/0:45:3:2:1:31:9.68%:34:1.1885E-1:45:28:13:15:32 0/1:51:12:7:5:48:25%:39:1.1153E-4:51:36:18:18:49 0/0:60:3:2:1:32:9.38%:34:1.1905E-1:50:29:14:15:32 0/0:60:5:2:3:42:11.9%:38:2.7555E-2:46:37:18:19:43 0/1:49:7:6:1:38:18.42%:22:5.7727E-3:42:31:15:16:38 0/0:60:4:4:0:26:15.38%:20:5.5222E-2:48:22:9:13:26 0/1:53:7:5:2:58:12.07%:21:6.4254E-3:46:50:27:23:58 0/0:60:4:3:1:25:16%:21:5.4928E-2:45:21:14:7:26 0/0:53:3:1:2:45:6.67%:56:1.2079E-1:46:42:28:14:45 0/0:39:1:1:0:29:3.45%:45:5E-1:49:28:16:12:29 0/0:54:4:3:1:27:14.81%:23:5.5494E-2:46:23:15:8:29 0/0:45:5:4:1:28:17.86%:19:2.5729E-2:47:23:13:10:29 0/0:60:3:2:1:25:12%:25:1.1735E-1:48:22:13:9:25 0/0:37:1:1:0:23:4.35%:34:5E-1:43:22:13:9:23 0/0:54:4:4:0:46:8.7%:49:5.8402E-2:43:42:25:17:46 0/0:60:3:1:2:33:9.09%:37:1.1923E-1:47:30:15:15:33 0/0:60:2:0:2:37:5.41%:50:2.4658E-1:46:35:12:23:37 0/0:54:4:2:2:28:14.29%:23:5.5746E-2:41:24:10:14:28 0/0:44:3:0:3:36:8.33%:40:1.1972E-1:44:33:19:14:36 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/1:46:8:6:2:35:22.86%:26:2.4931E-3:48:27:16:11:35 0/0:34:3:1:2:32:9.38%:34:1.1905E-1:47:29:15:14:32 0/0:53:3:1:2:36:8.33%:40:1.1972E-1:45:33:13:20:36 0/1:56:8:4:4:35:22.86%:26:2.4931E-3:46:27:16:11:37 0/0:47:5:2:3:35:14.29%:30:2.6822E-2:44:30:18:12:35 0/0:50:3:2:1:32:9.38%:34:1.1905E-1:52:29:17:12:32 0/0:53:3:2:1:32:9.38%:34:1.1905E-1:43:29:14:15:32 0/0:60:3:1:2:44:6.82%:53:1.2069E-1:50:41:19:22:44 0/0:49:2:2:0:35:5.71%:47:2.4638E-1:46:33:17:16:35 0/0:52:3:2:1:49:6.12%:63:1.2113E-1:46:46:20:26:49 0/0:49:4:2:2:60:6.67%:71:5.9362E-2:47:56:27:29:60 0/0:54:4:1:3:41:9.76%:44:5.79E-2:44:37:25:12:41 0/0:26:2:1:1:47:4.26%:67:2.4731E-1:47:45:19:26:49 0/0:45:3:2:1:27:11.11%:28:1.1792E-1:43:24:12:12:27 0/0:55:5:2:3:43:11.63%:41:2.764E-2:45:38:21:17:43 0/0:40:3:0:3:28:10.71%:28:1.1818E-1:41:25:13:12:28 0/0:49:4:3:1:31:12.9%:29:5.6405E-2:49:27:11:16:31 0/0:37:1:1:0:35:2.86%:55:5E-1:47:34:19:15:35 0/0:51:5:4:1:42:11.9%:38:2.7555E-2:47:37:17:20:43 0/0:60:3:2:1:28:10.71%:28:1.1818E-1:46:25:14:11:28 0/1:42:9:6:3:47:19.15%:28:1.2811E-3:47:38:17:21:47 0/1:49:8:3:5:58:13.79%:25:3.0172E-3:46:50:26:24:58 0/0:53:3:1:2:48:6.25%:59:1.2105E-1:51:45:20:25:48 0/0:53:3:1:2:28:10.71%:28:1.1818E-1:49:25:18:7:28 0/0:52:6:1:5:40:15%:30:1.2773E-2:45:34:22:12:40 0/0:60:1:0:1:23:4.35%:34:5E-1:48:22:14:8:23 0/0:46:3:3:0:40:7.5%:46:1.2025E-1:42:37:21:16:40 0/0:44:3:1:2:37:8.11%:43:1.1986E-1:43:34:16:18:38 0/0:38:3:2:1:36:8.33%:40:1.1972E-1:43:33:15:18:36 0/0:48:2:0:2:31:6.45%:40:2.459E-1:44:29:16:13:35 0/0:60:3:0:3:31:9.68%:34:1.1885E-1:47:28:12:16:31 0/0:37:3:2:1:47:6.38%:59:1.2097E-1:43:44:30:14:48 0/0:49:6:4:2:47:12.77%:42:1.3188E-2:47:41:22:19:47 0/0:60:2:0:2:40:5%:53:2.4684E-1:47:38:19:19:42 0/0:60:3:3:0:27:11.11%:28:1.1792E-1:45:24:12:12:27 0/0:39:1:1:0:45:2.22%:73:5E-1:43:44:23:21:45 0/0:37:1:1:0:35:2.86%:55:5E-1:48:34:18:16:37 0/0:60:4:3:1:38:10.53%:37:5.7534E-2:47:34:18:16:38 0/0:52:3:3:0:55:5.45%:73:1.2156E-1:47:52:32:20:55 0/0:40:5:3:2:35:14.29%:30:2.6822E-2:46:30:17:13:35 0/0:48:2:2:0:43:4.65%:60:2.4706E-1:47:41:20:21:43 0/0:54:4:2:2:33:12.12%:32:5.6777E-2:48:29:17:12:33 0/0:38:4:2:2:25:16%:21:5.4928E-2:50:21:12:9:25 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:39 0/0:60:5:2:3:38:13.16%:32:2.7169E-2:54:33:16:17:38 0/0:60:1:0:1:14:7.14%:17:5E-1:47:13:7:6:14 0/0:60:1:1:0:25:4%:38:5E-1:49:24:12:12:25 0/0:47:4:3:1:33:12.12%:32:5.6777E-2:44:29:14:15:33 0/0:51:5:4:1:32:15.62%:24:2.6412E-2:46:27:12:15:33 0/0:37:4:2:2:27:14.81%:23:5.5494E-2:43:23:16:7:27 0/0:43:4:4:0:34:11.76%:31:5.6946E-2:51:30:16:14:34 0/0:44:2:1:1:27:7.41%:34:2.4528E-1:42:25:15:10:27 0/0:49:4:2:2:34:11.76%:31:5.6946E-2:45:30:16:14:34 0/0:49:2:0:2:30:6.67%:37:2.4576E-1:43:28:14:14:30 0/0:37:1:0:1:38:2.63%:58:5E-1:45:37:13:24:38 0/0:60:1:1:0:46:2.17%:73:5E-1:46:45:15:30:47 0/0:38:1:1:0:23:4.35%:34:5E-1:51:22:10:12:24 0/0:32:1:1:0:24:4.17%:34:5E-1:46:23:15:8:24 0/0:45:3:1:2:41:7.32%:50:1.2037E-1:45:38:12:26:41 0/0:53:3:1:2:30:10%:31:1.1864E-1:44:27:9:18:30 0/0:33:1:0:1:23:4.35%:34:5E-1:45:22:12:10:24 0/0:60:1:0:1:31:3.23%:48:5E-1:50:30:22:8:32 0/0:60:3:2:1:27:11.11%:28:1.1792E-1:49:24:14:10:27 0/0:48:2:1:1:42:4.76%:57:2.4699E-1:46:40:25:15:42 0/0:60:3:1:2:22:13.64%:19:1.1628E-1:45:19:9:10:22 0/0:42:5:5:0:37:13.51%:32:2.706E-2:41:32:14:18:38 0/0:39:1:1:0:35:2.86%:55:5E-1:47:34:16:18:35 0/0:39:1:1:0:43:2.33%:70:5E-1:46:42:19:23:45 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:42:5:2:3:32:15.62%:24:2.6412E-2:45:27:14:13:32 0/0:54:5:4:1:40:12.5%:35:2.7371E-2:45:35:16:19:40 0/0:39:1:1:0:33:3.03%:52:5E-1:42:32:19:13:34 0/0:39:1:1:0:48:2.08%:76:5E-1:44:47:23:24:49 0/0:33:1:1:0:31:3.23%:48:5E-1:46:30:15:15:31 0/0:42:6:5:1:40:15%:30:1.2773E-2:42:34:13:21:40 0/0:37:3:3:0:36:8.33%:40:1.1972E-1:44:33:16:17:36 0/0:40:5:5:0:40:12.5%:35:2.7371E-2:44:35:15:20:40 0/0:38:3:3:0:23:13.04%:22:1.1667E-1:43:20:10:10:24 0/0:44:3:2:1:36:8.33%:40:1.1972E-1:47:33:17:16:36 0/0:45:6:2:4:38:15.79%:28:1.2628E-2:45:32:20:12:38 0/0:60:2:1:1:39:5.13%:54:2.4675E-1:44:37:20:17:41 0/0:47:5:3:2:41:12.2%:38:2.7465E-2:48:36:14:22:41 0/0:42:6:6:0:29:20.69%:18:1.1736E-2:47:23:13:10:29 0/0:46:3:3:0:35:8.57%:40:1.1957E-1:45:32:15:17:35 0/0:43:5:4:1:36:13.89%:29:2.6944E-2:46:31:15:16:37 0/0:36:2:2:0:34:5.88%:43:2.4627E-1:41:32:20:12:35 0/1:51:7:6:1:35:20%:22:5.6095E-3:45:28:16:12:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:45:3:2:1:44:6.82%:53:1.2069E-1:40:41:25:16:44 0/1:41:7:5:2:43:16.28%:22:5.9972E-3:40:36:19:17:45 0/0:45:3:3:0:37:8.11%:43:1.1986E-1:45:34:16:18:38 0/0:37:2:2:0:26:7.69%:30:2.451E-1:41:24:11:13:26 0/0:38:4:4:0:49:8.16%:56:5.8654E-2:42:45:24:21:50 0/0:37:4:3:1:37:10.81%:38:5.7399E-2:48:33:11:22:37 0/0:49:4:3:1:35:11.43%:35:5.7106E-2:44:31:17:14:35 0/0:47:2:2:0:34:5.88%:43:2.4627E-1:40:32:16:16:35 0/0:36:5:3:2:51:9.8%:53:2.8203E-2:42:46:20:26:51 0/0:38:3:3:0:41:7.32%:50:1.2037E-1:40:38:23:15:41 0/1:40:7:5:2:44:15.91%:22:6.0363E-3:41:37:19:18:44 0/0:38:4:4:0:42:9.52%:43:5.801E-2:39:38:20:18:43 0/0:41:4:2:2:35:11.43%:35:5.7106E-2:43:31:13:18:36 0/0:40:4:4:0:41:9.76%:44:5.79E-2:42:37:19:18:42 0/0:39:2:2:0:47:4.26%:67:2.4731E-1:44:45:30:15:47 0/0:35:3:3:0:37:8.11%:43:1.1986E-1:41:34:14:20:37 0/0:38:3:3:0:32:9.38%:34:1.1905E-1:41:29:15:14:33 0/1:37:8:7:1:36:22.22%:25:2.5282E-3:43:28:14:14:38 0/1:35:8:7:1:37:21.62%:25:2.5617E-3:43:29:15:14:37 0/0:38:2:2:0:36:5.56%:47:2.4648E-1:41:34:19:15:36 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:43:34:12:22:36 0/0:42:6:5:1:54:11.11%:50:1.3497E-2:38:48:23:25:55 0/0:43:4:4:0:46:8.7%:49:5.8402E-2:44:42:15:27:46 0/1:43:8:4:4:51:15.69%:25:2.9037E-3:43:43:23:20:51 0/0:45:3:3:0:40:7.5%:46:1.2025E-1:42:37:17:20:40 0/0:39:2:2:0:46:4.35%:63:2.4725E-1:44:44:21:23:46 0/0:49:2:1:1:32:6.25%:40:2.4603E-1:44:30:17:13:32 0/0:48:2:2:0:28:7.14%:34:2.4545E-1:45:26:12:14:29 0/0:60:2:1:1:36:5.56%:47:2.4648E-1:44:34:20:14:37 0/0:38:4:3:1:30:13.33%:26:5.62E-2:42:26:14:12:31 0/0:49:2:1:1:23:8.7%:28:2.4444E-1:43:21:10:11:23 0/0:49:2:1:1:33:6.06%:44:2.4615E-1:42:31:15:16:33 0/0:51:3:1:2:42:7.14%:49:1.2048E-1:42:39:23:16:42 0/0:60:4:2:2:58:6.9%:68:5.9254E-2:43:54:18:36:58 0/0:52:3:2:1:46:6.52%:56:1.2088E-1:42:43:18:25:46 MTB_anc 2866578 . C A . PASS AC=15;AF=0.050;AN=300;ANN=A|missense_variant|MODERATE|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.111C>A|p.His37Gln|111/660|111/660|37/219||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866578C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866578C>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:32:2:0:2:55:3.64%:81:2.4771E-1:45:53:27:26:56 0/0:60:1:1:0:21:4.76%:31:5E-1:51:20:11:9:21 0/0:44:4:3:1:59:6.78%:72:5.9309E-2:49:55:27:28:60 0/1:50:7:4:3:42:16.67%:22:5.9563E-3:45:35:15:20:43 0/1:43:7:4:3:36:19.44%:22:5.6667E-3:43:29:16:13:36 0/0:43:4:2:2:39:10.26%:41:5.7662E-2:44:35:17:18:39 0/0:60:2:0:2:40:5%:53:2.4684E-1:48:38:17:21:40 0/0:45:3:2:1:29:10.34%:31:1.1842E-1:44:26:12:14:30 0/1:50:13:8:5:50:26%:43:4.9906E-5:51:37:20:17:50 0/0:60:2:1:1:30:6.67%:37:2.4576E-1:52:28:14:14:30 0/0:60:6:3:3:43:13.95%:36:1.2967E-2:47:37:18:19:43 0/1:48:7:6:1:39:17.95%:22:5.8219E-3:41:32:16:16:39 0/0:60:4:4:0:27:14.81%:23:5.5494E-2:47:23:10:13:27 0/1:53:7:5:2:57:12.28%:21:6.4254E-3:45:50:27:23:60 0/0:60:4:3:1:27:14.81%:23:5.5494E-2:42:23:16:7:27 0/0:53:3:1:2:45:6.67%:56:1.2079E-1:46:42:27:15:45 0/0:39:1:1:0:28:3.57%:41:5E-1:49:27:15:12:28 0/0:53:4:3:1:27:14.81%:23:5.5494E-2:45:23:15:8:28 0/0:42:6:5:1:29:20.69%:18:1.1736E-2:46:23:12:11:29 0/0:60:2:2:0:26:7.69%:30:2.451E-1:47:24:13:11:26 0/0:34:1:1:0:19:5.26%:28:5E-1:43:18:11:7:20 0/0:54:4:4:0:44:9.09%:46:5.8215E-2:44:40:23:17:45 0/0:60:4:1:3:34:11.76%:31:5.6946E-2:47:30:16:14:34 0/0:60:2:0:2:37:5.41%:50:2.4658E-1:47:35:13:22:37 0/0:54:4:2:2:25:16%:21:5.4928E-2:42:21:9:12:25 0/0:42:4:1:3:37:10.81%:38:5.7399E-2:43:33:20:13:37 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/1:44:7:6:1:34:20.59%:22:5.5492E-3:48:27:15:12:34 0/0:37:3:1:2:31:9.68%:34:1.1885E-1:46:28:14:14:31 0/0:53:3:1:2:37:8.11%:43:1.1986E-1:45:34:13:21:37 0/1:56:8:3:5:36:22.22%:25:2.5282E-3:44:28:16:12:38 0/0:42:5:2:3:34:14.71%:27:2.6693E-2:43:29:17:12:34 0/0:51:3:2:1:32:9.38%:34:1.1905E-1:51:29:17:12:32 0/0:53:3:2:1:31:9.68%:34:1.1885E-1:43:28:13:15:32 0/0:60:3:1:2:44:6.82%:53:1.2069E-1:51:41:20:21:45 0/0:49:2:2:0:35:5.71%:47:2.4638E-1:48:33:17:16:36 0/0:52:3:2:1:51:5.88%:66:1.2129E-1:46:48:21:27:51 0/0:51:5:3:2:60:8.33%:65:2.8658E-2:46:55:28:27:60 0/0:54:4:1:3:41:9.76%:44:5.79E-2:45:37:25:12:42 0/0:0:0:0:0:46:0%:85:1E0:45:46:19:27:47 0/0:45:3:2:1:28:10.71%:28:1.1818E-1:43:25:13:12:28 0/0:54:5:2:3:43:11.63%:41:2.764E-2:46:38:23:15:43 0/0:44:3:0:3:27:11.11%:28:1.1792E-1:41:24:12:12:27 0/0:49:4:3:1:29:13.79%:26:5.5981E-2:48:25:10:15:29 0/0:37:1:1:0:35:2.86%:55:5E-1:47:34:18:16:35 0/0:51:5:4:1:42:11.9%:38:2.7555E-2:45:37:17:20:42 0/0:54:4:2:2:28:14.29%:23:5.5746E-2:47:24:14:10:29 0/1:43:9:6:3:47:19.15%:28:1.2811E-3:46:38:17:21:47 0/1:48:8:3:5:57:14.04%:25:3.0025E-3:45:49:26:23:58 0/0:60:2:1:1:49:4.08%:71:2.4742E-1:50:47:21:26:49 0/0:52:3:1:2:27:11.11%:28:1.1792E-1:49:24:17:7:28 0/0:52:6:1:5:39:15.38%:31:1.2702E-2:45:33:22:11:39 0/0:60:1:0:1:23:4.35%:34:5E-1:47:22:13:9:23 0/0:46:3:3:0:36:8.33%:40:1.1972E-1:43:33:19:14:37 0/0:41:4:1:3:39:10.26%:41:5.7662E-2:42:35:17:18:39 0/0:37:3:2:1:35:8.57%:40:1.1957E-1:44:32:15:17:35 0/0:44:3:1:2:35:8.57%:40:1.1957E-1:44:32:18:14:36 0/0:60:3:0:3:31:9.68%:34:1.1885E-1:46:28:12:16:32 0/0:38:3:2:1:45:6.67%:56:1.2079E-1:43:42:28:14:46 0/0:52:6:4:2:47:12.77%:42:1.3188E-2:45:41:22:19:48 0/0:60:2:0:2:35:5.71%:47:2.4638E-1:48:33:15:18:37 0/0:60:3:3:0:28:10.71%:28:1.1818E-1:45:25:13:12:28 0/0:39:1:1:0:43:2.33%:70:5E-1:43:42:21:21:45 0/0:33:1:1:0:36:2.78%:55:5E-1:47:35:18:17:37 0/0:60:4:3:1:38:10.53%:37:5.7534E-2:46:34:17:17:38 0/0:53:3:3:0:53:5.66%:69:1.2143E-1:47:50:31:19:54 0/0:43:4:2:2:34:11.76%:31:5.6946E-2:46:30:17:13:35 0/0:49:2:2:0:42:4.76%:57:2.4699E-1:45:40:19:21:42 0/0:53:4:2:2:33:12.12%:29:5.6596E-2:48:28:16:12:33 0/0:37:3:2:1:24:12.5%:22:1.1702E-1:49:21:11:10:24 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:60:5:2:3:37:13.51%:32:2.706E-2:53:32:15:17:37 0/0:60:1:0:1:14:7.14%:17:5E-1:47:13:7:6:14 0/0:60:1:1:0:25:4%:38:5E-1:48:24:12:12:25 0/0:49:4:3:1:30:13.33%:26:5.62E-2:43:26:13:13:31 0/0:54:4:3:1:32:12.5%:29:5.6596E-2:46:28:11:17:34 0/0:42:5:3:2:30:16.67%:21:2.6093E-2:43:25:16:9:30 0/0:42:4:4:0:33:12.12%:32:5.6777E-2:51:29:16:13:33 0/0:49:2:1:1:26:7.69%:30:2.451E-1:41:24:14:10:27 0/0:49:4:2:2:33:12.12%:32:5.6777E-2:44:29:16:13:34 0/0:48:2:0:2:31:6.45%:40:2.459E-1:42:29:15:14:31 0/0:37:1:0:1:36:2.78%:55:5E-1:45:35:11:24:37 0/0:60:1:1:0:42:2.38%:66:5E-1:44:41:14:27:44 0/0:39:1:1:0:22:4.55%:31:5E-1:52:21:10:11:22 0/0:34:1:1:0:22:4.55%:31:5E-1:46:21:14:7:23 0/0:43:3:1:2:39:7.69%:47:1.2013E-1:45:36:11:25:40 0/0:53:3:1:2:27:11.11%:28:1.1792E-1:45:24:9:15:29 0/0:38:1:0:1:21:4.76%:31:5E-1:44:20:11:9:22 0/0:60:1:0:1:30:3.33%:44:5E-1:49:29:21:8:31 0/0:60:3:2:1:26:11.54%:25:1.1765E-1:50:23:13:10:26 0/0:48:2:1:1:42:4.76%:57:2.4699E-1:45:40:25:15:42 0/0:60:3:1:2:19:15.79%:17:1.1486E-1:46:16:8:8:19 0/0:42:5:5:0:36:13.89%:29:2.6944E-2:41:31:13:18:36 0/0:38:1:1:0:35:2.86%:55:5E-1:45:34:16:18:35 0/0:39:1:1:0:43:2.33%:70:5E-1:47:42:19:23:43 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:41:5:3:2:32:15.62%:24:2.6412E-2:43:27:14:13:33 0/0:55:5:4:1:39:12.82%:35:2.7273E-2:45:34:15:19:39 0/0:39:1:1:0:33:3.03%:52:5E-1:42:32:19:13:33 0/0:39:1:1:0:46:2.17%:73:5E-1:42:45:21:24:48 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/1:44:7:5:2:40:17.5%:22:5.8688E-3:42:33:13:20:40 0/0:38:2:2:0:34:5.88%:43:2.4627E-1:42:32:15:17:35 0/0:41:6:6:0:40:15%:30:1.2773E-2:44:34:14:20:40 0/0:37:4:4:0:24:16.67%:18:5.461E-2:44:20:11:9:25 0/0:44:3:2:1:37:8.11%:43:1.1986E-1:46:34:17:17:38 0/0:44:6:2:4:37:16.22%:28:1.2549E-2:44:31:20:11:37 0/0:60:2:1:1:40:5%:53:2.4684E-1:43:38:20:18:40 0/0:49:6:4:2:40:15%:30:1.2773E-2:47:34:13:21:40 0/0:42:6:6:0:28:21.43%:16:1.1603E-2:48:22:13:9:28 0/0:46:3:3:0:35:8.57%:40:1.1957E-1:45:32:15:17:35 0/0:49:4:4:0:35:11.43%:35:5.7106E-2:45:31:15:16:37 0/0:35:2:2:0:33:6.06%:44:2.4615E-1:42:31:20:11:33 0/1:51:7:6:1:37:18.92%:22:5.721E-3:45:30:16:14:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:37 0/0:45:3:2:1:43:6.98%:53:1.2059E-1:38:40:24:16:44 0/0:42:6:4:2:44:13.64%:36:1.3026E-2:38:38:21:17:46 0/0:48:2:2:0:37:5.41%:50:2.4658E-1:45:35:17:18:39 0/0:39:1:1:0:22:4.55%:31:5E-1:43:21:9:12:26 0/0:37:4:4:0:48:8.33%:52:5.8574E-2:41:44:23:21:49 0/0:38:4:3:1:37:10.81%:38:5.7399E-2:48:33:11:22:37 0/0:49:4:3:1:34:11.76%:31:5.6946E-2:44:30:17:13:35 0/0:60:1:1:0:32:3.12%:48:5E-1:41:31:17:14:34 0/0:34:4:2:2:50:8%:55:5.8732E-2:42:46:20:26:53 0/0:38:3:3:0:40:7.5%:46:1.2025E-1:40:37:22:15:40 0/1:39:7:5:2:42:16.67%:22:5.9563E-3:42:35:19:16:42 0/0:39:4:4:0:45:8.89%:50:5.8311E-2:39:41:22:19:45 0/0:41:4:2:2:36:11.11%:34:5.7257E-2:42:32:15:17:36 0/0:45:3:3:0:40:7.5%:46:1.2025E-1:41:37:19:18:43 0/0:35:3:3:0:49:6.12%:63:1.2113E-1:43:46:31:15:50 0/0:37:3:3:0:37:8.11%:43:1.1986E-1:40:34:16:18:38 0/0:38:4:3:1:33:12.12%:32:5.6777E-2:39:29:13:16:33 0/1:37:8:7:1:34:23.53%:26:2.4562E-3:43:26:13:13:35 0/1:37:7:6:1:35:20%:22:5.6095E-3:43:28:14:14:36 0/0:36:3:3:0:35:8.57%:40:1.1957E-1:42:32:18:14:35 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:41:34:13:21:36 0/0:42:6:5:1:55:10.91%:53:1.3535E-2:37:49:23:26:55 0/0:44:4:4:0:45:8.89%:50:5.8311E-2:43:41:15:26:46 0/1:43:7:4:3:47:14.89%:22:6.1442E-3:42:40:21:19:47 0/0:44:3:3:0:40:7.5%:46:1.2025E-1:41:37:18:19:40 0/0:39:2:2:0:45:4.44%:64:2.4719E-1:44:43:21:22:45 0/0:60:1:0:1:32:3.12%:48:5E-1:42:31:17:14:33 0/0:49:2:2:0:25:8%:31:2.449E-1:46:23:12:11:26 0/0:50:3:2:1:36:8.33%:40:1.1972E-1:43:33:20:13:36 0/0:38:4:3:1:29:13.79%:26:5.5981E-2:41:25:14:11:30 0/0:49:2:1:1:22:9.09%:24:2.4419E-1:43:20:9:11:22 0/0:49:2:1:1:33:6.06%:44:2.4615E-1:41:31:15:16:34 0/0:49:3:1:2:40:7.5%:46:1.2025E-1:41:37:22:15:40 0/0:60:4:2:2:58:6.9%:68:5.9254E-2:41:54:18:36:58 0/0:53:3:2:1:47:6.38%:59:1.2097E-1:41:44:18:26:47 MTB_anc 2866580 . A G . PASS AC=16;AF=0.053;AN=300;ANN=G|missense_variant|MODERATE|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.113A>G|p.Asn38Ser|113/660|113/660|38/219||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866580A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866580A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:2:0:2:52:3.85%:74:2.4757E-1:46:50:25:25:55 0/0:60:2:1:1:22:9.09%:24:2.4419E-1:50:20:11:9:22 0/0:44:4:3:1:59:6.78%:72:5.9309E-2:49:55:28:27:60 0/1:50:7:4:3:44:15.91%:22:6.0363E-3:46:37:15:22:44 0/0:44:6:3:3:34:17.65%:23:1.2287E-2:43:28:16:12:35 0/0:42:4:2:2:37:10.81%:38:5.7399E-2:45:33:17:16:39 0/0:60:3:0:3:39:7.69%:47:1.2013E-1:49:36:16:20:41 0/0:44:3:2:1:29:10.34%:31:1.1842E-1:44:26:12:14:30 0/1:51:13:8:5:49:26.53%:43:4.8866E-5:52:36:19:17:50 0/0:60:2:1:1:29:6.9%:37:2.4561E-1:52:27:13:14:29 0/0:60:6:3:3:42:14.29%:33:1.2905E-2:48:36:18:18:42 0/1:49:7:6:1:38:18.42%:22:5.7727E-3:41:31:15:16:39 0/0:60:4:4:0:27:14.81%:23:5.5494E-2:47:23:10:13:27 0/1:53:7:5:2:59:11.86%:21:6.4707E-3:46:52:28:24:60 0/0:60:4:3:1:27:14.81%:23:5.5494E-2:42:23:16:7:27 0/0:53:3:1:2:45:6.67%:56:1.2079E-1:46:42:28:14:46 0/0:39:1:1:0:27:3.7%:41:5E-1:49:26:14:12:27 0/0:50:5:4:1:26:19.23%:17:2.531E-2:46:21:14:7:28 0/0:45:5:4:1:27:18.52%:19:2.5527E-2:47:22:12:10:30 0/0:60:2:2:0:25:8%:31:2.449E-1:48:23:12:11:26 0/0:37:1:1:0:20:5%:27:5E-1:43:19:12:7:20 0/0:54:4:4:0:44:9.09%:46:5.8215E-2:44:40:22:18:44 0/0:60:4:1:3:34:11.76%:31:5.6946E-2:47:30:16:14:34 0/0:60:2:0:2:36:5.56%:47:2.4648E-1:47:34:12:22:37 0/0:54:4:2:2:23:17.39%:18:5.4264E-2:44:19:8:11:25 0/0:46:5:1:4:38:13.16%:32:2.7169E-2:43:33:20:13:38 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:26 0/1:44:7:6:1:34:20.59%:22:5.5492E-3:48:27:15:12:34 0/0:34:3:1:2:30:10%:31:1.1864E-1:47:27:13:14:31 0/0:53:3:1:2:35:8.57%:40:1.1957E-1:46:32:13:19:37 0/1:54:9:4:5:33:27.27%:29:1.042E-3:46:24:15:9:37 0/0:41:5:2:3:33:15.15%:24:2.6412E-2:42:27:17:10:34 0/0:52:4:2:2:33:12.12%:32:5.6777E-2:51:29:17:12:33 0/0:53:3:2:1:32:9.38%:34:1.1905E-1:43:29:14:15:32 0/0:60:3:1:2:44:6.82%:53:1.2069E-1:51:41:20:21:45 0/0:49:2:2:0:35:5.71%:47:2.4638E-1:48:33:17:16:36 0/0:52:3:2:1:49:6.12%:63:1.2113E-1:47:46:19:27:50 0/0:51:5:3:2:59:8.47%:65:2.8614E-2:47:54:27:27:59 0/0:53:4:1:3:39:10.26%:41:5.7662E-2:45:35:24:11:42 0/0:38:1:1:0:43:2.33%:70:5E-1:46:42:17:25:46 0/0:46:3:2:1:27:11.11%:28:1.1792E-1:43:24:13:11:27 0/0:54:5:2:3:42:11.9%:38:2.7555E-2:46:37:23:14:43 0/0:44:3:0:3:28:10.71%:28:1.1818E-1:41:25:13:12:28 0/0:49:4:3:1:29:13.79%:26:5.5981E-2:48:25:10:15:29 0/0:38:1:1:0:35:2.86%:55:5E-1:47:34:18:16:35 0/0:51:5:4:1:41:12.2%:38:2.7465E-2:45:36:17:19:41 0/0:54:4:2:2:30:13.33%:26:5.62E-2:46:26:15:11:30 0/1:42:9:6:3:46:19.57%:28:1.2682E-3:46:37:18:19:47 0/1:46:8:3:5:56:14.29%:25:2.9874E-3:45:48:27:21:58 0/0:60:2:1:1:48:4.17%:67:2.4737E-1:49:46:21:25:49 0/0:51:3:1:2:29:10.34%:31:1.1842E-1:48:26:18:8:29 0/0:52:6:1:5:39:15.38%:31:1.2702E-2:46:33:21:12:40 0/0:60:1:0:1:23:4.35%:34:5E-1:46:22:13:9:23 0/0:49:2:2:0:36:5.56%:47:2.4648E-1:43:34:20:14:37 0/0:44:3:1:2:38:7.89%:43:1.2E-1:42:35:17:18:40 0/0:37:3:2:1:35:8.57%:40:1.1957E-1:43:32:15:17:35 0/0:48:2:0:2:34:5.88%:43:2.4627E-1:44:32:18:14:37 0/0:60:3:0:3:31:9.68%:34:1.1885E-1:45:28:13:15:32 0/0:38:3:2:1:43:6.98%:53:1.2059E-1:44:40:26:14:44 0/1:49:7:5:2:48:14.58%:22:6.1774E-3:46:41:23:18:48 0/0:60:2:0:2:38:5.26%:50:2.4667E-1:47:36:16:20:38 0/0:60:4:4:0:29:13.79%:26:5.5981E-2:45:25:13:12:30 0/0:39:1:1:0:40:2.5%:62:5E-1:44:39:20:19:45 0/0:20:1:1:0:37:2.7%:59:5E-1:47:36:19:17:37 0/0:60:4:3:1:37:10.81%:38:5.7399E-2:47:33:17:16:38 0/0:53:3:3:0:52:5.77%:66:1.2136E-1:48:49:30:19:53 0/0:42:4:2:2:35:11.43%:35:5.7106E-2:45:31:18:13:35 0/0:49:2:2:0:43:4.65%:60:2.4706E-1:45:41:20:21:43 0/0:60:3:2:1:31:9.68%:34:1.1885E-1:48:28:16:12:33 0/0:37:3:2:1:24:12.5%:22:1.1702E-1:49:21:11:10:24 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:39 0/0:60:5:2:3:34:14.71%:27:2.6693E-2:55:29:12:17:35 0/0:60:2:0:2:14:14.29%:12:2.4074E-1:48:12:6:6:15 0/0:60:1:1:0:23:4.35%:34:5E-1:50:22:10:12:25 0/0:47:4:3:1:30:13.33%:26:5.62E-2:43:26:13:13:31 0/0:50:5:3:2:33:15.15%:27:2.6557E-2:46:28:11:17:36 0/0:42:5:3:2:30:16.67%:21:2.6093E-2:43:25:16:9:30 0/0:41:4:4:0:33:12.12%:32:5.6777E-2:51:29:16:13:33 0/0:45:3:2:1:26:11.54%:25:1.1765E-1:41:23:13:10:26 0/0:49:4:2:2:33:12.12%:32:5.6777E-2:46:29:15:14:33 0/0:48:2:0:2:30:6.67%:37:2.4576E-1:42:28:15:13:31 0/0:37:1:0:1:37:2.7%:59:5E-1:45:36:13:23:37 0/0:60:1:1:0:44:2.27%:69:5E-1:45:43:15:28:44 0/0:39:1:1:0:21:4.76%:31:5E-1:52:20:10:10:21 0/0:32:1:1:0:22:4.55%:31:5E-1:45:21:15:6:22 0/0:45:3:1:2:36:8.33%:40:1.1972E-1:46:33:10:23:40 0/0:52:3:1:2:29:10.34%:31:1.1842E-1:44:26:9:17:29 0/0:38:1:0:1:20:5%:27:5E-1:44:19:10:9:22 0/0:60:1:0:1:30:3.33%:44:5E-1:48:29:21:8:30 0/0:60:3:2:1:24:12.5%:22:1.1702E-1:52:21:12:9:24 0/0:48:2:1:1:42:4.76%:57:2.4699E-1:44:40:25:15:43 0/0:60:3:1:2:19:15.79%:17:1.1486E-1:46:16:8:8:19 0/0:42:5:5:0:37:13.51%:32:2.706E-2:41:32:13:19:37 0/0:39:1:1:0:34:2.94%:51:5E-1:45:33:15:18:35 0/0:39:1:1:0:42:2.38%:66:5E-1:47:41:18:23:43 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:41:5:2:3:28:17.86%:19:2.5729E-2:45:23:11:12:32 0/0:55:5:4:1:39:12.82%:35:2.7273E-2:45:34:15:19:39 0/0:39:1:1:0:32:3.12%:48:5E-1:42:31:18:13:33 0/0:39:1:1:0:45:2.22%:73:5E-1:43:44:21:23:48 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/1:45:7:5:2:40:17.5%:22:5.8688E-3:42:33:12:21:41 0/0:35:3:3:0:33:9.09%:37:1.1923E-1:43:30:14:16:35 0/0:42:6:6:0:40:15%:30:1.2773E-2:43:34:14:20:40 0/0:37:4:4:0:24:16.67%:18:5.461E-2:44:20:11:9:24 0/0:45:3:2:1:38:7.89%:43:1.2E-1:45:35:17:18:38 0/0:45:6:2:4:37:16.22%:28:1.2549E-2:45:31:20:11:37 0/0:60:2:1:1:40:5%:53:2.4684E-1:43:38:20:18:41 0/0:49:6:4:2:38:15.79%:28:1.2628E-2:48:32:12:20:40 0/0:42:6:6:0:29:20.69%:18:1.1736E-2:48:23:13:10:29 0/0:43:4:3:1:36:11.11%:34:5.7257E-2:46:32:16:16:37 0/0:47:5:4:1:37:13.51%:32:2.706E-2:44:32:16:16:38 0/0:37:2:2:0:30:6.67%:37:2.4576E-1:43:28:18:10:33 0/1:48:7:6:1:37:18.92%:22:5.721E-3:45:30:16:14:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:36 0/0:42:3:2:1:43:6.98%:53:1.2059E-1:39:40:24:16:45 0/1:41:7:5:2:43:16.28%:22:5.9972E-3:38:36:20:16:46 0/0:49:2:2:0:34:5.88%:43:2.4627E-1:46:32:17:15:39 0/0:37:1:1:0:23:4.35%:34:5E-1:41:22:10:12:26 0/0:37:5:5:0:46:10.87%:44:2.7874E-2:42:41:22:19:49 0/0:37:4:3:1:37:10.81%:38:5.7399E-2:49:33:11:22:37 0/0:48:4:3:1:35:11.43%:35:5.7106E-2:45:31:17:14:35 0/0:45:2:2:0:33:6.06%:44:2.4615E-1:40:31:17:14:34 0/0:34:4:2:2:50:8%:55:5.8732E-2:44:46:20:26:54 0/0:37:3:3:0:39:7.69%:47:1.2013E-1:39:36:22:14:40 0/1:39:7:5:2:38:18.42%:22:5.7727E-3:42:31:17:14:41 0/0:39:3:3:0:43:6.98%:53:1.2059E-1:39:40:22:18:46 0/0:42:4:2:2:33:12.12%:32:5.6777E-2:42:29:13:16:36 0/0:42:3:3:0:43:6.98%:53:1.2059E-1:41:40:20:20:44 0/0:38:3:3:0:50:6%:62:1.2121E-1:43:47:31:16:50 0/0:39:2:2:0:34:5.88%:43:2.4627E-1:41:32:15:17:37 0/0:38:3:3:0:30:10%:31:1.1864E-1:40:27:12:15:33 0/1:37:8:7:1:34:23.53%:26:2.4562E-3:44:26:13:13:35 0/1:37:7:6:1:35:20%:22:5.6095E-3:43:28:13:15:37 0/0:37:3:3:0:34:8.82%:37:1.194E-1:41:31:18:13:35 0/0:49:2:1:1:35:5.71%:47:2.4638E-1:41:33:14:19:36 0/0:41:6:5:1:53:11.32%:50:1.3458E-2:38:47:23:24:55 0/0:44:4:4:0:43:9.3%:47:5.8115E-2:43:39:16:23:46 0/1:44:7:4:3:44:15.91%:22:6.0363E-3:42:37:19:18:47 0/0:44:3:3:0:40:7.5%:46:1.2025E-1:42:37:18:19:40 0/0:38:2:2:0:46:4.35%:63:2.4725E-1:43:44:22:22:47 0/0:47:2:1:1:31:6.45%:40:2.459E-1:44:29:16:13:34 0/0:49:2:2:0:27:7.41%:34:2.4528E-1:43:25:14:11:28 0/0:52:3:2:1:36:8.33%:40:1.1972E-1:43:33:20:13:36 0/0:38:4:3:1:26:15.38%:20:5.5222E-2:42:22:13:9:28 0/0:49:2:1:1:22:9.09%:24:2.4419E-1:43:20:9:11:22 0/0:49:2:1:1:34:5.88%:43:2.4627E-1:40:32:15:17:35 0/0:52:3:1:2:40:7.5%:46:1.2025E-1:41:37:22:15:40 0/0:60:4:2:2:54:7.41%:62:5.9012E-2:42:50:17:33:56 0/0:52:3:2:1:46:6.52%:56:1.2088E-1:41:43:17:26:47 MTB_anc 2866607 . G A . PASS AC=15;AF=0.050;AN=300;ANN=A|missense_variant|MODERATE|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.140G>A|p.Gly47Asp|140/660|140/660|47/219||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866607G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866607G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:2:0:2:54:3.7%:77:2.4766E-1:46:52:29:23:55 0/0:60:2:1:1:20:10%:21:2.4359E-1:50:18:12:6:21 0/0:41:4:3:1:56:7.14%:65:5.9137E-2:47:52:24:28:56 0/1:50:7:3:4:43:16.28%:22:5.9972E-3:44:36:16:20:43 0/0:47:6:3:3:33:18.18%:23:1.219E-2:43:27:15:12:35 0/0:42:4:2:2:33:12.12%:32:5.6777E-2:46:29:14:15:33 0/0:60:4:1:3:36:11.11%:34:5.7257E-2:50:32:14:18:36 0/0:45:4:3:1:30:13.33%:26:5.62E-2:45:26:13:13:30 0/1:50:13:8:5:48:27.08%:43:4.7798E-5:48:35:18:17:49 0/0:60:2:1:1:30:6.67%:37:2.4576E-1:51:28:11:17:30 0/0:60:5:3:2:39:12.82%:35:2.7273E-2:47:34:18:16:40 0/0:51:6:5:1:36:16.67%:25:1.2467E-2:42:30:15:15:36 0/0:60:4:3:1:25:16%:21:5.4928E-2:48:21:10:11:25 0/1:53:7:5:2:55:12.73%:21:6.377E-3:46:48:26:22:56 0/0:60:4:3:1:26:15.38%:20:5.5222E-2:39:22:15:7:26 0/0:52:3:1:2:47:6.38%:59:1.2097E-1:43:44:28:16:47 0/0:37:1:1:0:25:4%:38:5E-1:51:24:11:13:26 0/0:49:5:4:1:21:23.81%:12:2.3921E-2:45:16:10:6:21 0/0:43:5:4:1:30:16.67%:21:2.6093E-2:44:25:13:12:32 0/0:60:2:2:0:26:7.69%:30:2.451E-1:46:24:12:12:26 0/0:38:1:1:0:13:7.69%:18:5E-1:48:12:6:6:14 0/0:54:4:4:0:44:9.09%:46:5.8215E-2:44:40:23:17:48 0/0:60:4:1:3:30:13.33%:26:5.62E-2:46:26:14:12:30 0/0:60:2:0:2:35:5.71%:47:2.4638E-1:48:33:13:20:35 0/0:54:4:2:2:25:16%:21:5.4928E-2:40:21:9:12:25 0/0:46:5:2:3:37:13.51%:32:2.706E-2:41:32:18:14:39 0/0:38:1:1:0:25:4%:38:5E-1:49:24:17:7:27 0/0:41:6:5:1:28:21.43%:16:1.1603E-2:49:22:13:9:28 0/0:43:4:1:3:29:13.79%:26:5.5981E-2:45:25:13:12:30 0/0:52:3:1:2:38:7.89%:43:1.2E-1:44:35:13:22:39 0/1:51:11:5:6:37:29.73%:36:2.0455E-4:45:26:15:11:37 0/0:42:5:2:3:32:15.62%:24:2.6412E-2:41:27:17:10:32 0/0:52:4:2:2:37:10.81%:38:5.7399E-2:51:33:20:13:38 0/0:52:3:2:1:27:11.11%:28:1.1792E-1:46:24:13:11:27 0/0:60:3:1:2:45:6.67%:56:1.2079E-1:51:42:23:19:45 0/0:49:2:2:0:31:6.45%:40:2.459E-1:47:29:17:12:31 0/0:47:4:2:2:51:7.84%:59:5.8806E-2:45:47:21:26:51 0/0:51:6:4:2:58:10.34%:56:1.3641E-2:47:52:28:24:58 0/0:53:4:1:3:35:11.43%:35:5.7106E-2:45:31:20:11:37 0/0:36:1:1:0:41:2.44%:66:5E-1:45:40:16:24:41 0/0:43:3:2:1:24:12.5%:22:1.1702E-1:43:21:12:9:25 0/0:55:5:2:3:43:11.63%:41:2.764E-2:45:38:20:18:44 0/0:42:4:1:3:29:13.79%:26:5.5981E-2:41:25:13:12:29 0/0:47:4:3:1:26:15.38%:20:5.5222E-2:48:22:7:15:26 0/0:49:2:1:1:38:5.26%:50:2.4667E-1:46:36:22:14:38 0/0:51:5:4:1:44:11.36%:41:2.7721E-2:46:39:20:19:44 0/0:54:4:2:2:35:11.43%:35:5.7106E-2:46:31:17:14:35 0/1:42:9:6:3:47:19.15%:28:1.2811E-3:45:38:20:18:47 0/1:50:7:3:4:53:13.21%:21:6.3251E-3:46:46:24:22:53 0/0:60:2:1:1:48:4.17%:67:2.4737E-1:49:46:23:23:48 0/0:50:3:1:2:26:11.54%:25:1.1765E-1:48:23:17:6:27 0/1:48:8:3:5:42:19.05%:25:2.7074E-3:47:34:22:12:43 0/0:60:1:0:1:21:4.76%:31:5E-1:50:20:13:7:21 0/0:49:2:2:0:37:5.41%:50:2.4658E-1:43:35:20:15:39 0/0:46:2:1:1:35:5.71%:47:2.4638E-1:44:33:14:19:36 0/0:37:3:2:1:37:8.11%:43:1.1986E-1:41:34:19:15:37 0/0:37:2:1:1:33:6.06%:44:2.4615E-1:44:31:18:13:34 0/0:60:3:0:3:32:9.38%:34:1.1905E-1:46:29:15:14:33 0/0:36:4:2:2:44:9.09%:46:5.8215E-2:45:40:25:15:44 0/1:45:8:5:3:45:17.78%:25:2.7808E-3:49:37:22:15:45 0/0:60:3:0:3:39:7.69%:47:1.2013E-1:45:36:17:19:39 0/0:54:5:5:0:34:14.71%:27:2.6693E-2:44:29:17:12:34 0/0:38:1:1:0:43:2.33%:70:5E-1:44:42:21:21:44 0/0:31:1:1:0:30:3.33%:44:5E-1:47:29:17:12:31 0/0:60:4:3:1:40:10%:40:5.7784E-2:45:36:17:19:40 0/0:52:3:3:0:47:6.38%:59:1.2097E-1:46:44:28:16:47 0/0:36:3:2:1:30:10%:31:1.1864E-1:46:27:15:12:31 0/0:47:2:2:0:48:4.17%:67:2.4731E-1:44:45:23:22:48 0/0:60:4:2:2:28:14.29%:23:5.5746E-2:50:24:14:10:28 0/0:34:3:2:1:23:13.04%:22:1.1667E-1:48:20:11:9:23 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:60:5:2:3:32:15.62%:24:2.6412E-2:53:27:11:16:32 0/0:60:3:0:3:16:18.75%:11:1.129E-1:46:13:7:6:16 0/0:60:1:1:0:21:4.76%:31:5E-1:49:20:11:9:21 0/0:43:3:2:1:34:8.82%:37:1.194E-1:42:31:18:13:35 0/0:48:6:4:2:31:19.35%:20:1.1977E-2:46:25:10:15:32 0/0:41:5:3:2:33:15.15%:27:2.6557E-2:42:28:17:11:34 0/0:41:4:4:0:32:12.5%:29:5.6596E-2:52:28:15:13:32 0/0:36:3:2:1:25:12%:25:1.1735E-1:40:22:12:10:25 0/0:49:4:2:2:32:12.5%:29:5.6596E-2:42:28:16:12:32 0/0:48:2:0:2:28:7.14%:34:2.4545E-1:41:26:14:12:30 0/0:37:1:0:1:33:3.03%:52:5E-1:44:32:14:18:36 0/0:46:2:2:0:42:4.76%:57:2.4699E-1:46:40:15:25:43 0/0:38:1:1:0:21:4.76%:31:5E-1:52:20:10:10:21 0/0:30:1:1:0:18:5.56%:24:5E-1:48:17:14:3:18 0/0:48:2:1:1:38:5.26%:50:2.4667E-1:44:36:10:26:38 0/0:50:3:1:2:28:10.71%:28:1.1818E-1:46:25:9:16:28 0/0:30:1:0:1:18:5.56%:24:5E-1:44:17:8:9:20 0/0:60:1:0:1:28:3.57%:41:5E-1:48:27:20:7:28 0/0:60:3:2:1:25:12%:25:1.1735E-1:49:22:14:8:25 0/0:49:2:1:1:41:4.88%:57:2.4691E-1:42:39:25:14:41 0/0:60:3:1:2:19:15.79%:17:1.1486E-1:48:16:8:8:19 0/0:41:5:5:0:41:12.2%:38:2.7465E-2:39:36:15:21:42 0/0:38:1:1:0:34:2.94%:51:5E-1:46:33:15:18:34 0/0:38:1:1:0:45:2.22%:73:5E-1:45:44:20:24:45 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:37:6:3:3:30:20%:18:1.186E-2:42:24:13:11:32 0/0:55:5:4:1:37:13.51%:32:2.706E-2:44:32:15:17:37 0/0:38:1:1:0:33:3.03%:52:5E-1:43:32:21:11:35 0/0:38:1:1:0:44:2.27%:69:5E-1:42:43:21:22:44 0/0:34:1:1:0:29:3.45%:45:5E-1:45:28:14:14:29 0/1:44:7:5:2:42:16.67%:22:5.9563E-3:43:35:15:20:42 0/0:37:4:4:0:35:11.43%:35:5.7106E-2:43:31:16:15:36 0/0:46:5:5:0:39:12.82%:35:2.7273E-2:44:34:14:20:40 0/0:35:4:4:0:23:17.39%:18:5.4264E-2:43:19:10:9:24 0/0:45:2:1:1:34:5.88%:43:2.4627E-1:47:32:16:16:36 0/0:45:6:2:4:33:18.18%:23:1.219E-2:47:27:19:8:33 0/0:60:2:1:1:39:5.13%:54:2.4675E-1:44:37:19:18:40 0/0:49:6:4:2:37:16.22%:28:1.2549E-2:46:31:12:19:37 0/0:40:6:6:0:31:19.35%:20:1.1977E-2:46:25:13:12:31 0/0:43:4:3:1:36:11.11%:34:5.7257E-2:43:32:18:14:36 0/0:46:5:4:1:36:13.89%:29:2.6944E-2:44:31:15:16:37 0/0:35:2:2:0:28:7.14%:34:2.4545E-1:44:26:19:7:28 0/1:50:7:6:1:39:17.95%:22:5.8219E-3:44:32:15:17:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:40:3:2:1:37:8.11%:43:1.1986E-1:40:34:21:13:38 0/1:38:7:5:2:40:17.5%:22:5.8688E-3:38:33:19:14:41 0/0:40:3:3:0:38:7.89%:43:1.2E-1:47:35:16:19:40 0/0:36:1:1:0:27:3.7%:41:5E-1:43:26:14:12:27 0/0:34:4:4:0:53:7.55%:62:5.8946E-2:39:49:28:21:54 0/0:38:3:3:0:37:8.11%:43:1.1986E-1:47:34:10:24:38 0/0:42:4:4:0:35:11.43%:35:5.7106E-2:44:31:17:14:35 0/0:49:2:2:0:33:6.06%:44:2.4615E-1:42:31:17:14:35 0/0:32:4:2:2:53:7.55%:62:5.8946E-2:42:49:21:28:57 0/0:34:3:3:0:35:8.57%:40:1.1957E-1:39:32:19:13:37 0/1:40:7:5:2:37:18.92%:22:5.721E-3:42:30:18:12:37 0/0:36:5:5:0:45:11.11%:44:2.7799E-2:39:40:21:19:46 0/0:42:4:2:2:33:12.12%:32:5.6777E-2:43:29:13:16:34 0/0:41:4:4:0:43:9.3%:47:5.8115E-2:41:39:21:18:45 0/0:37:3:3:0:43:6.98%:53:1.2059E-1:43:40:27:13:44 0/0:36:3:3:0:30:10%:31:1.1864E-1:41:27:12:15:33 0/0:36:4:3:1:29:13.79%:26:5.5981E-2:39:25:10:15:32 0/1:36:7:6:1:32:21.88%:22:5.4182E-3:42:25:14:11:32 0/1:36:7:6:1:31:22.58%:22:5.3469E-3:43:24:10:14:33 0/0:37:2:2:0:34:5.88%:43:2.4627E-1:40:32:16:16:35 0/0:49:2:1:1:33:6.06%:44:2.4615E-1:40:31:14:17:34 0/0:40:6:5:1:52:11.54%:47:1.3417E-2:38:46:23:23:52 0/0:43:4:4:0:46:8.7%:49:5.8402E-2:45:42:19:23:47 0/1:42:7:4:3:48:14.58%:22:6.1774E-3:41:41:20:21:48 0/0:49:2:2:0:38:5.26%:50:2.4667E-1:42:36:19:17:38 0/0:38:2:2:0:47:4.26%:67:2.4731E-1:43:45:21:24:47 0/0:48:2:1:1:34:5.88%:43:2.4627E-1:42:32:17:15:34 0/0:49:2:2:0:28:7.14%:34:2.4545E-1:44:26:15:11:30 0/0:52:3:2:1:38:7.89%:43:1.2E-1:43:35:21:14:39 0/0:37:3:2:1:27:11.11%:28:1.1792E-1:40:24:15:9:28 0/0:49:2:1:1:18:11.11%:18:2.4286E-1:44:16:8:8:19 0/0:49:2:1:1:32:6.25%:40:2.4603E-1:41:30:12:18:32 0/0:49:3:1:2:41:7.32%:50:1.2037E-1:41:38:22:16:41 0/0:60:4:2:2:49:8.16%:56:5.8654E-2:42:45:15:30:52 0/0:52:3:2:1:48:6.25%:59:1.2105E-1:41:45:20:25:49 MTB_anc 2866647 . G A . PASS AC=11;AF=0.037;AN=300;ANN=A|synonymous_variant|LOW|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.180G>A|p.Lys60Lys|180/660|180/660|60/219||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866647G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866647G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:2:1:1:52:3.85%:74:2.4757E-1:48:50:28:22:52 0/0:60:2:1:1:22:9.09%:24:2.4419E-1:54:20:13:7:22 0/0:42:5:4:1:58:8.62%:62:2.8569E-2:47:53:25:28:58 0/0:49:6:3:3:39:15.38%:31:1.2702E-2:44:33:14:19:39 0/0:51:5:3:2:35:14.29%:30:2.6822E-2:42:30:17:13:35 0/0:48:2:1:1:31:6.45%:40:2.459E-1:45:29:16:13:32 0/0:60:3:1:2:33:9.09%:37:1.1923E-1:48:30:14:16:34 0/0:43:3:2:1:28:10.71%:28:1.1818E-1:45:25:12:13:28 0/1:48:13:8:5:43:30.23%:43:4.2025E-5:49:30:11:19:44 0/0:60:1:0:1:28:3.57%:41:5E-1:50:27:10:17:29 0/0:60:4:2:2:35:11.43%:35:5.7106E-2:50:31:14:17:35 0/0:55:5:4:1:36:13.89%:29:2.6944E-2:46:31:15:16:37 0/0:60:4:3:1:26:15.38%:21:5.4928E-2:50:21:8:13:26 0/0:54:4:2:2:53:7.55%:62:5.8946E-2:45:49:29:20:54 0/0:60:4:3:1:22:18.18%:15:5.3885E-2:43:18:11:7:23 0/0:52:3:1:2:44:6.82%:53:1.2069E-1:44:41:26:15:44 0/0:32:1:1:0:24:4.17%:34:5E-1:45:23:13:10:26 0/0:46:2:2:0:19:10.53%:21:2.4324E-1:45:17:10:7:20 0/0:45:5:4:1:35:14.29%:30:2.6822E-2:43:30:16:14:37 0/0:60:2:2:0:23:8.7%:28:2.4444E-1:46:21:10:11:25 0/0:0:0:0:0:13:0%:25:1E0:46:13:6:7:14 0/0:52:3:3:0:43:6.98%:53:1.2059E-1:44:40:21:19:45 0/0:60:4:1:3:23:17.39%:18:5.4264E-2:46:19:11:8:24 0/0:60:1:0:1:36:2.78%:55:5E-1:50:35:15:20:36 0/0:53:3:2:1:29:10.34%:31:1.1842E-1:43:26:12:14:29 0/0:45:6:3:3:35:17.14%:25:1.238E-2:44:29:15:14:37 0/0:43:3:3:0:30:10%:31:1.1864E-1:46:27:16:11:30 0/0:42:6:5:1:29:20.69%:18:1.1736E-2:54:23:13:10:30 0/0:43:4:1:3:30:13.33%:26:5.5981E-2:46:25:14:11:30 0/0:52:3:1:2:40:7.5%:46:1.2025E-1:42:37:14:23:41 0/1:48:9:5:4:39:23.08%:29:1.162E-3:42:30:16:14:39 0/0:37:4:2:2:24:16.67%:18:5.461E-2:41:20:12:8:24 0/0:48:4:2:2:37:10.81%:38:5.7399E-2:47:33:21:12:37 0/0:54:4:3:1:33:12.12%:32:5.6777E-2:47:29:15:14:33 0/0:60:2:1:1:40:5%:53:2.4684E-1:50:38:22:16:40 0/0:49:2:2:0:30:6.67%:37:2.4576E-1:47:28:14:14:30 0/0:51:3:1:2:44:6.82%:53:1.2069E-1:44:41:20:21:46 0/0:51:6:4:2:56:10.71%:53:1.3571E-2:46:50:28:22:56 0/0:48:2:1:1:34:5.88%:43:2.4627E-1:47:32:20:12:34 0/0:39:1:1:0:42:2.38%:66:5E-1:45:41:18:23:43 0/0:38:2:2:0:21:9.52%:25:2.439E-1:44:19:12:7:22 0/0:48:3:1:2:43:6.98%:53:1.2059E-1:47:40:21:19:44 0/0:45:3:0:3:27:11.11%:25:1.1765E-1:39:23:13:10:28 0/0:39:1:1:0:23:4.35%:34:5E-1:48:22:9:13:24 0/0:49:2:1:1:33:6.06%:44:2.4615E-1:47:31:18:13:34 0/0:49:4:3:1:46:8.7%:49:5.8402E-2:43:42:24:18:46 0/0:49:2:0:2:33:6.06%:44:2.4615E-1:46:31:17:14:33 0/1:40:7:5:2:42:16.67%:22:5.9563E-3:49:35:18:17:42 0/1:50:7:3:4:50:14%:22:6.2398E-3:44:43:21:22:51 0/0:60:1:0:1:50:2%:80:5E-1:48:49:23:26:50 0/0:60:2:1:1:29:6.9%:37:2.4561E-1:49:27:14:13:32 0/1:43:8:5:3:41:19.51%:25:2.6808E-3:46:33:17:16:42 0/0:60:1:0:1:17:5.88%:24:5E-1:51:16:9:7:17 0/0:45:3:3:0:42:7.14%:49:1.2048E-1:44:39:22:17:42 0/0:48:2:1:1:36:5.56%:47:2.4648E-1:45:34:13:21:36 0/0:38:3:2:1:34:8.82%:37:1.194E-1:40:31:17:14:34 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:44:30:16:14:33 0/0:56:2:0:2:31:6.45%:40:2.459E-1:43:29:15:14:31 0/0:39:3:2:1:48:6.25%:59:1.2105E-1:45:45:25:20:48 0/0:51:5:4:1:45:11.11%:44:2.7799E-2:48:40:22:18:46 0/0:60:3:0:3:36:8.33%:40:1.1972E-1:42:33:16:17:36 0/0:60:1:1:0:29:3.45%:45:5E-1:44:28:17:11:30 0/0:38:1:1:0:40:2.5%:62:5E-1:44:39:19:20:40 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:60:4:3:1:39:10.26%:41:5.7662E-2:45:35:18:17:40 0/0:47:4:4:0:41:9.76%:40:5.7784E-2:50:36:24:12:41 0/0:36:3:2:1:30:10%:31:1.1864E-1:43:27:16:11:31 0/0:60:1:1:0:40:2.5%:62:5E-1:47:39:19:20:43 0/0:60:2:0:2:27:7.41%:34:2.4528E-1:49:25:15:10:28 0/0:38:3:2:1:22:13.64%:19:1.1628E-1:49:19:11:8:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:23:12:36 0/0:60:5:2:3:32:15.62%:24:2.6412E-2:51:27:10:17:32 0/0:60:2:0:2:17:11.76%:18:2.4242E-1:49:15:8:7:17 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:45:3:2:1:37:8.11%:43:1.1986E-1:43:34:20:14:38 0/0:42:4:2:2:30:13.33%:26:5.62E-2:44:26:11:15:31 0/0:42:5:3:2:33:15.15%:27:2.6557E-2:44:28:17:11:34 0/0:49:2:2:0:28:7.14%:34:2.4545E-1:49:26:14:12:29 0/0:42:4:3:1:25:16%:21:5.4928E-2:44:21:10:11:28 0/0:45:3:1:2:30:10%:31:1.1864E-1:44:27:15:12:30 0/0:49:2:0:2:31:6.45%:40:2.459E-1:39:29:14:15:31 0/0:37:1:0:1:33:3.03%:52:5E-1:46:32:16:16:34 0/0:49:2:2:0:39:5.13%:54:2.4675E-1:45:37:14:23:39 0/0:60:1:1:0:22:4.55%:31:5E-1:48:21:9:12:22 0/0:0:0:0:0:17:0%:33:1E0:47:17:13:4:19 0/0:34:1:1:0:40:2.5%:62:5E-1:43:39:11:28:40 0/0:46:2:0:2:28:7.14%:34:2.4545E-1:46:26:9:17:29 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:20 0/0:60:1:0:1:31:3.23%:48:5E-1:47:30:19:11:31 0/0:60:3:2:1:27:11.11%:28:1.1792E-1:47:24:16:8:27 0/0:49:2:1:1:38:5.26%:50:2.4667E-1:46:36:22:14:38 0/0:0:0:0:0:19:0%:37:1E0:52:19:8:11:20 0/0:39:4:4:0:40:10%:40:5.7784E-2:41:36:15:21:41 0/0:25:1:1:0:34:2.94%:51:5E-1:45:33:15:18:34 0/0:39:1:1:0:38:2.63%:58:5E-1:44:37:18:19:38 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:42:5:3:2:30:16.67%:21:2.6093E-2:41:25:13:12:30 0/0:50:3:2:1:36:8.33%:40:1.1972E-1:43:33:15:18:36 0/0:39:1:1:0:36:2.78%:55:5E-1:45:35:19:16:36 0/0:37:1:1:0:41:2.44%:66:5E-1:44:40:19:21:41 0/0:38:1:1:0:28:3.57%:41:5E-1:45:27:12:15:29 0/0:42:5:4:1:36:13.89%:29:2.6944E-2:45:31:12:19:37 0/0:36:4:4:0:32:12.5%:29:5.6596E-2:45:28:13:15:33 0/1:42:7:6:1:37:18.92%:22:5.721E-3:44:30:12:18:37 0/0:41:4:4:0:25:16%:21:5.4928E-2:45:21:12:9:26 0/0:24:1:1:0:34:2.94%:51:5E-1:47:33:14:19:35 0/0:41:6:2:4:31:19.35%:20:1.1977E-2:44:25:18:7:31 0/0:60:1:1:0:38:2.63%:58:5E-1:42:37:21:16:38 0/1:46:7:5:2:39:17.95%:22:5.8219E-3:45:32:14:18:39 0/0:36:5:5:0:33:15.15%:27:2.6557E-2:43:28:15:13:33 0/0:43:4:3:1:30:13.33%:26:5.62E-2:47:26:13:13:31 0/0:49:4:4:0:29:13.79%:26:5.5981E-2:45:25:14:11:31 0/0:43:2:2:0:27:7.41%:34:2.4528E-1:42:25:18:7:27 0/0:49:6:6:0:35:17.14%:25:1.238E-2:44:29:13:16:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:35 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:43:34:19:15:38 0/1:41:7:5:2:34:20.59%:22:5.5492E-3:38:27:15:12:36 0/0:45:3:3:0:34:8.82%:37:1.194E-1:44:31:13:18:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:36:6:6:0:52:11.54%:47:1.3417E-2:41:46:26:20:55 0/0:37:4:3:1:43:9.3%:47:5.8115E-2:46:39:14:25:43 0/0:43:4:4:0:32:12.5%:29:5.6596E-2:46:28:16:12:33 0/0:49:2:2:0:34:5.88%:43:2.4627E-1:42:32:16:16:35 0/0:36:3:2:1:53:5.66%:69:1.2143E-1:42:50:20:30:55 0/0:38:2:2:0:32:6.25%:40:2.4603E-1:42:30:17:13:33 0/1:39:8:6:2:37:21.62%:25:2.5617E-3:43:29:18:11:38 0/0:42:5:5:0:47:10.64%:47:2.7945E-2:40:42:24:18:47 0/0:40:4:2:2:40:10%:40:5.7784E-2:43:36:19:17:40 0/0:42:4:4:0:42:9.52%:43:5.801E-2:43:38:21:17:43 0/0:35:3:3:0:44:6.82%:53:1.2069E-1:43:41:26:15:46 0/0:37:1:1:0:29:3.45%:45:5E-1:44:28:13:15:32 0/0:38:3:3:0:29:10.34%:31:1.1842E-1:42:26:13:13:30 0/1:36:7:6:1:28:25%:22:5.1054E-3:46:21:10:11:30 0/0:38:6:6:0:35:17.14%:25:1.238E-2:42:29:10:19:36 0/0:36:3:3:0:30:10%:31:1.1864E-1:40:27:13:14:32 0/0:45:2:1:1:28:7.14%:34:2.4545E-1:44:26:14:12:29 0/0:41:5:5:0:56:8.93%:58:2.8473E-2:40:51:26:25:56 0/0:36:3:3:0:52:5.77%:66:1.2136E-1:46:49:23:26:53 0/1:44:7:4:3:42:16.67%:22:5.9563E-3:42:35:16:19:43 0/0:49:2:2:0:42:4.76%:57:2.4691E-1:42:39:21:18:42 0/0:38:2:2:0:45:4.44%:64:2.4719E-1:45:43:22:21:45 0/0:48:2:1:1:30:6.67%:37:2.4576E-1:44:28:15:13:30 0/0:48:2:2:0:32:6.25%:40:2.4603E-1:42:30:18:12:32 0/0:47:4:3:1:37:10.81%:38:5.7399E-2:43:33:19:14:38 0/0:38:4:3:1:28:14.29%:23:5.5746E-2:40:24:17:7:28 0/0:49:2:1:1:16:12.5%:15:2.4194E-1:45:14:5:9:16 0/0:48:2:1:1:35:5.71%:47:2.4638E-1:40:33:16:17:35 0/0:52:3:1:2:38:7.89%:43:1.2E-1:42:35:19:16:38 0/0:60:3:1:2:55:5.45%:73:1.2156E-1:43:52:21:31:55 0/0:49:2:2:0:47:4.26%:67:2.4731E-1:38:45:19:26:48 MTB_anc 2866657 . G A . PASS AC=247;AF=0.823;AN=300;ANN=A|missense_variant|MODERATE|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.190G>A|p.Glu64Lys|190/660|190/660|64/219||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866657G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866657G>A||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:50:28:22:51:98.04%:99:1.3013E-28:36:1:1:0:51 1/1:53:19:11:8:21:90.48%:93:4.7003E-10:60:2:1:1:21 1/1:48:50:25:25:55:90.91%:99:5.5432E-26:41:5:4:1:55 0/1:45:34:15:19:39:87.18%:99:3.9902E-17:46:5:2:3:39 0/1:42:31:17:14:35:88.57%:99:7.3316E-16:48:4:2:2:35 1/1:45:27:14:13:30:90%:99:4.6134E-14:43:3:2:1:30 1/1:47:32:18:14:35:91.43%:99:7.5196E-17:60:3:1:2:35 0/1:46:23:13:10:26:88.46%:99:7.3681E-12:43:3:2:1:26 0/1:47:28:13:15:40:70%:99:1.9197E-12:48:12:6:6:41 1/1:52:25:10:15:26:96.15%:99:5.4444E-14:60:1:0:1:27 0/1:49:29:13:16:33:87.88%:99:9.1482E-15:60:4:2:2:33 0/1:47:30:15:15:35:85.71%:99:5.8653E-15:54:5:4:1:35 0/1:51:20:8:12:24:83.33%:91:6.3493E-10:60:4:3:1:24 1/1:46:46:27:19:50:92%:99:3.1346E-24:49:4:3:1:50 0/1:45:20:14:6:24:83.33%:91:6.3493E-10:53:4:3:1:24 1/1:45:38:23:15:41:92.68%:99:3.1178E-20:52:3:1:2:42 1/1:43:25:13:12:27:92.59%:99:2.0853E-13:48:2:2:0:27 1/1:49:18:9:9:20:90%:87:1.6758E-9:49:2:2:0:21 0/1:44:31:15:16:36:86.11%:99:1.6935E-15:46:5:4:1:39 0/1:48:22:12:10:25:88%:99:2.5916E-11:51:3:3:0:25 1/1:46:13:6:7:14:92.86%:64:3.7391E-7:38:1:1:0:14 1/1:46:42:23:19:45:93.33%:99:1.6658E-22:51:3:3:0:45 0/1:47:18:12:6:22:81.82%:81:7.1052E-9:60:4:1:3:22 1/1:47:35:16:19:37:94.59%:99:4.2437E-19:60:2:0:2:37 1/1:43:27:13:14:29:93.1%:99:1.5465E-14:49:2:1:1:29 1/1:45:33:18:15:36:91.67%:99:2.0653E-17:38:3:1:2:36 1/1:47:28:16:12:31:90.32%:99:1.2857E-14:44:3:3:0:31 0/1:51:20:12:8:26:76.92%:87:1.8273E-9:41:6:5:1:26 0/1:47:25:14:11:28:89.29%:99:5.8768E-13:46:3:0:3:28 1/1:41:36:15:21:39:92.31%:99:4.2179E-19:52:3:1:2:39 0/1:44:29:14:15:38:76.32%:99:1.977E-13:48:9:5:4:38 0/1:42:19:12:7:22:86.36%:89:1.0931E-9:37:3:2:1:22 1/1:48:33:20:13:36:91.67%:99:2.0653E-17:42:3:2:1:37 1/1:46:31:17:14:34:91.18%:99:2.7308E-16:52:3:2:1:35 1/1:51:37:22:15:38:97.37%:99:5.6582E-21:60:1:1:0:38 1/1:48:28:13:15:30:93.33%:99:4.194E-15:49:2:2:0:30 1/1:45:42:21:21:45:93.33%:99:1.6658E-22:52:3:2:1:45 0/1:47:47:28:19:53:88.68%:99:7.1833E-24:52:6:4:2:53 1/1:48:29:20:9:31:93.55%:99:1.1344E-15:49:2:1:1:33 1/1:46:41:18:23:42:97.62%:99:2.5612E-23:38:1:1:0:42 1/1:46:20:13:7:22:90.91%:98:1.3117E-10:37:2:2:0:22 1/1:46:42:24:18:45:93.33%:99:1.6658E-22:52:3:1:2:45 0/1:42:23:14:9:26:88.46%:99:7.3681E-12:45:3:0:3:26 1/1:49:22:9:13:23:95.65%:99:2.9149E-12:35:1:1:0:23 1/1:45:32:19:13:34:94.12%:99:2.2142E-17:49:2:1:1:34 1/1:44:39:21:18:42:92.86%:99:8.4519E-21:53:3:2:1:44 1/1:47:30:17:13:31:96.77%:99:6.8754E-17:38:1:0:1:31 0/1:48:34:19:15:40:85%:99:8.7127E-17:41:6:5:1:40 0/1:46:43:21:22:49:87.76%:99:1.1378E-21:47:6:3:3:49 1/1:48:46:21:25:47:97.87%:99:2.9526E-26:60:1:0:1:48 1/1:50:27:14:13:29:93.1%:99:1.5465E-14:47:2:1:1:29 0/1:44:34:18:16:42:80.95%:99:3.1978E-16:43:8:5:3:43 1/1:48:17:9:8:18:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:46:35:18:17:38:92.11%:99:1.5466E-18:44:3:3:0:40 1/1:45:35:13:22:37:94.59%:99:4.2437E-19:48:2:1:1:37 1/1:42:32:18:14:35:91.43%:99:7.5196E-17:37:3:2:1:35 1/1:45:31:17:14:33:93.94%:99:8.2416E-17:49:2:1:1:33 1/1:44:26:14:12:28:92.86%:99:5.6872E-14:60:2:0:2:28 1/1:45:40:24:16:43:93.02%:99:2.287E-21:38:3:2:1:47 1/1:46:37:23:14:41:90.24%:99:3.5075E-19:48:4:3:1:44 1/1:43:33:15:18:36:91.67%:99:2.0653E-17:60:3:0:3:37 1/1:43:30:19:11:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:44:37:17:20:38:97.37%:99:5.6582E-21:38:1:1:0:39 1/1:45:29:17:12:30:96.67%:99:2.6212E-16:35:1:1:0:31 0/1:47:32:14:18:36:88.89%:99:2.0653E-16:60:4:3:1:37 1/1:49:38:26:12:42:90.48%:99:9.7197E-20:48:4:4:0:42 1/1:42:28:18:10:31:90.32%:99:1.2857E-14:37:3:2:1:31 1/1:49:39:18:21:41:95.12%:99:2.1258E-21:46:2:2:0:43 1/1:52:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 0/1:50:20:11:9:23:86.96%:95:3.1579E-10:35:3:2:1:23 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 0/1:53:24:9:15:28:85.71%:99:4.7015E-12:60:4:1:3:28 0/1:53:13:7:6:15:86.67%:60:8.7675E-7:60:2:0:2:16 1/1:51:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:35:21:14:38:92.11%:99:1.5466E-18:44:3:2:1:39 0/1:45:23:10:13:26:88.46%:99:7.3681E-12:38:3:1:2:28 0/1:46:29:18:11:34:85.29%:99:2.0235E-14:42:5:3:2:35 1/1:49:26:13:13:28:92.86%:99:5.6872E-14:48:2:2:0:28 0/1:45:22:11:11:27:81.48%:99:1.0343E-10:41:5:4:1:27 1/1:45:27:15:12:29:93.1%:99:1.5465E-14:49:2:1:1:29 1/1:40:26:12:14:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:46:34:18:16:35:97.14%:99:3.2089E-19:37:1:0:1:35 1/1:45:36:12:24:38:94.74%:99:1.1316E-19:49:2:2:0:39 1/1:48:20:9:11:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:49:18:13:5:19:94.74%:92:5.6585E-10:30:1:1:0:19 1/1:43:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:27:12:15:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:17:10:28:96.43%:99:3.7915E-15:60:1:0:1:28 0/1:49:24:16:8:27:88.89%:99:2.0853E-12:60:3:2:1:27 1/1:46:37:23:14:39:94.87%:99:3.0128E-20:49:2:1:1:39 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:37:14:23:40:92.5%:99:1.1479E-19:45:3:3:0:40 1/1:46:30:14:16:31:96.77%:99:6.8754E-17:24:1:1:0:31 1/1:47:33:16:17:34:97.06%:99:1.2301E-18:38:1:1:0:35 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 0/1:42:24:12:12:29:82.76%:99:9.2544E-12:42:5:3:2:30 1/1:44:32:14:18:35:91.43%:99:7.5196E-17:50:3:2:1:35 1/1:45:37:20:17:38:97.37%:99:5.6582E-21:38:1:1:0:38 1/1:45:41:20:21:42:97.62%:99:2.5612E-23:37:1:1:0:42 1/1:46:25:10:15:27:92.59%:99:2.0853E-13:35:2:2:0:27 0/1:48:30:12:18:36:83.33%:99:1.1855E-14:41:6:5:1:36 0/1:46:27:13:14:32:84.38%:99:2.3785E-13:37:5:5:0:33 0/1:44:31:13:18:37:83.78%:99:3.4914E-15:42:6:6:0:38 0/1:47:19:12:7:23:82.61%:86:2.1316E-9:43:4:4:0:23 1/1:47:32:13:19:33:96.97%:99:4.7095E-18:27:1:1:0:34 0/1:45:23:17:6:28:82.14%:99:3.103E-11:41:5:1:4:28 1/1:42:34:19:15:35:97.14%:99:3.2089E-19:60:1:1:0:35 0/1:47:30:14:16:37:81.08%:99:2.1946E-14:46:7:5:2:37 0/1:44:29:16:13:33:87.88%:99:9.1482E-15:38:4:4:0:34 0/1:47:27:15:12:31:87.1%:99:1.125E-13:43:4:3:1:31 0/1:46:27:14:13:31:87.1%:99:1.125E-13:48:4:4:0:32 1/1:40:23:16:7:25:92%:99:2.7767E-12:45:2:2:0:25 0/1:45:30:13:17:36:83.33%:99:1.1855E-14:49:6:6:0:37 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:33:19:14:36:91.67%:99:2.0653E-17:43:3:2:1:37 0/1:42:21:12:9:28:75%:90:8.7917E-10:39:7:5:2:31 1/1:45:31:13:18:34:91.18%:99:2.7308E-16:43:3:3:0:34 1/1:43:26:14:12:27:96.3%:99:1.4382E-14:37:1:1:0:27 0/1:41:45:26:19:51:88.24%:99:9.0809E-23:35:6:6:0:53 1/1:45:40:13:27:44:90.91%:99:7.413E-21:37:4:3:1:45 0/1:46:32:18:14:36:88.89%:99:2.0653E-16:42:4:4:0:36 1/1:43:31:15:16:33:93.94%:99:8.2416E-17:49:2:2:0:34 1/1:42:51:20:31:54:94.44%:99:1.1771E-27:34:3:3:0:56 1/1:43:30:16:14:32:93.75%:99:3.0612E-16:36:2:2:0:34 0/1:43:29:17:12:37:78.38%:99:1.2345E-13:38:8:6:2:37 0/1:40:41:24:17:46:89.13%:99:5.7183E-21:41:5:5:0:46 0/1:45:34:18:16:38:89.47%:99:1.6239E-17:43:4:2:2:38 0/1:45:35:18:17:40:87.5%:99:1.1364E-17:42:5:5:0:41 1/1:43:44:29:15:47:93.62%:99:1.2056E-23:37:3:3:0:48 0/1:45:26:12:14:29:89.66%:99:1.6496E-13:37:3:3:0:30 1/1:42:27:14:13:30:90%:99:4.6134E-14:36:3:3:0:30 0/1:46:24:11:13:31:77.42%:99:2.7115E-11:36:7:6:1:33 0/1:41:28:10:18:35:80%:99:2.4048E-13:36:7:7:0:35 1/1:41:29:12:17:32:90.62%:99:3.5714E-15:38:3:3:0:32 1/1:44:27:14:13:30:90%:99:4.6134E-14:39:3:2:1:30 1/1:39:54:26:28:59:91.53%:99:3.1304E-28:40:5:5:0:59 1/1:47:47:24:23:50:94%:99:2.3219E-25:36:3:3:0:50 0/1:43:34:16:18:41:82.93%:99:1.7333E-16:43:7:4:3:41 1/1:44:36:21:15:38:94.74%:99:1.1316E-19:49:2:2:0:39 1/1:45:44:24:20:46:95.65%:99:2.7459E-24:37:2:2:0:46 1/1:42:29:15:14:31:93.55%:99:1.1344E-15:49:2:1:1:31 1/1:43:30:18:12:32:93.75%:99:3.0612E-16:47:2:2:0:32 0/1:43:33:21:12:37:89.19%:99:5.7997E-17:47:4:3:1:39 0/1:40:25:19:6:29:86.21%:99:1.3609E-12:37:4:3:1:30 0/1:45:15:6:9:17:88.24%:71:7.3277E-8:49:2:1:1:17 1/1:40:33:16:17:35:94.29%:99:5.9366E-18:46:2:1:1:35 1/1:43:35:19:16:37:94.59%:99:4.2437E-19:60:2:1:1:38 1/1:45:50:23:27:53:94.34%:99:4.4193E-27:60:3:1:2:54 1/1:39:42:19:23:45:93.33%:99:1.6658E-22:44:3:3:0:45 MTB_anc 2866671 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|synonymous_variant|LOW|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.204G>A|p.Glu68Glu|204/660|204/660|68/219||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866671G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866671G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:1:0:52:1.92%:83:5E-1:43:51:28:23:52 0/0:60:2:1:1:19:10.53%:21:2.4324E-1:54:17:9:8:19 0/0:41:5:4:1:53:9.43%:52:2.8261E-2:47:47:23:24:53 0/0:38:3:1:2:36:8.33%:40:1.1972E-1:44:33:14:19:37 0/0:47:4:2:2:35:11.43%:31:5.6946E-2:41:30:16:14:35 0/0:45:2:1:1:28:7.14%:34:2.4545E-1:44:26:14:12:29 0/0:60:3:1:2:37:8.11%:43:1.1986E-1:48:34:19:15:37 0/0:43:3:2:1:26:11.54%:25:1.1765E-1:46:23:13:10:26 0/1:47:9:3:6:36:25%:29:1.1061E-3:48:27:10:17:39 0/0:60:1:0:1:25:4%:38:5E-1:52:24:10:14:26 0/0:60:4:2:2:31:12.9%:29:5.6405E-2:47:27:13:14:32 0/0:60:4:3:1:32:12.5%:29:5.6596E-2:46:28:13:15:34 0/0:60:4:3:1:24:16.67%:18:5.461E-2:52:20:8:12:24 0/0:40:3:3:0:49:6.12%:63:1.2113E-1:44:46:28:18:50 0/0:52:3:2:1:21:14.29%:19:1.1585E-1:46:18:13:5:22 0/0:48:2:1:1:40:5%:53:2.4684E-1:44:38:22:16:40 0/0:60:1:1:0:24:4.17%:34:5E-1:42:23:13:10:25 0/0:32:1:1:0:19:5.26%:28:5E-1:49:18:8:10:20 0/0:44:3:2:1:37:8.11%:43:1.1986E-1:45:34:18:16:37 0/0:48:3:3:0:26:11.54%:25:1.1765E-1:51:23:12:11:27 0/0:0:0:0:0:14:0%:25:1E0:45:14:7:7:14 0/0:49:3:3:0:42:7.14%:49:1.2048E-1:45:39:23:16:43 0/0:60:3:1:2:21:14.29%:19:1.1585E-1:47:18:12:6:21 0/0:60:2:0:2:36:5.56%:47:2.4648E-1:46:34:15:19:36 0/0:46:2:1:1:30:6.67%:37:2.4576E-1:41:28:15:13:30 0/0:38:3:1:2:34:8.82%:37:1.194E-1:47:31:17:14:34 0/0:49:2:2:0:28:7.14%:34:2.4545E-1:47:26:15:11:28 0/0:41:6:5:1:26:23.08%:13:1.1309E-2:51:20:11:9:26 0/0:44:3:0:3:29:10.34%:31:1.1842E-1:46:26:14:12:29 0/0:38:1:1:0:35:2.86%:55:5E-1:39:34:15:19:35 0/1:50:7:5:2:36:19.44%:22:5.6667E-3:44:29:15:14:36 0/0:35:2:2:0:22:9.09%:24:2.4419E-1:41:20:11:9:22 0/0:42:3:2:1:35:8.57%:40:1.1957E-1:48:32:19:13:37 0/0:47:2:2:0:30:6.67%:37:2.4576E-1:47:28:14:14:31 0/0:60:1:1:0:37:2.7%:59:5E-1:51:36:21:15:37 0/0:49:2:2:0:32:6.25%:40:2.4603E-1:47:30:14:16:32 0/0:60:2:1:1:43:4.65%:60:2.4706E-1:44:41:21:20:44 0/0:52:6:4:2:54:11.11%:50:1.3497E-2:47:48:28:20:54 0/0:47:2:1:1:34:5.88%:43:2.4627E-1:43:32:22:10:35 0/0:30:1:1:0:40:2.5%:62:5E-1:47:39:16:23:40 0/0:35:2:2:0:24:8.33%:27:2.4468E-1:43:22:14:8:24 0/0:60:2:0:2:43:4.65%:60:2.4706E-1:45:41:23:18:44 0/0:43:3:0:3:26:11.54%:25:1.1765E-1:43:23:14:9:26 0/0:38:1:1:0:21:4.76%:31:5E-1:46:20:8:12:21 0/0:49:2:1:1:37:5.41%:50:2.4658E-1:44:35:21:14:37 0/0:52:3:2:1:42:7.14%:49:1.2048E-1:42:39:21:18:42 0/0:38:1:0:1:31:3.23%:48:5E-1:46:30:18:12:32 0/0:41:6:5:1:39:15.38%:31:1.2702E-2:47:33:20:13:39 0/0:43:6:3:3:45:13.33%:39:1.3082E-2:45:39:20:19:45 0/0:60:1:0:1:49:2.04%:80:5E-1:47:48:23:25:49 0/0:42:2:1:1:28:7.14%:34:2.4545E-1:50:26:14:12:28 0/0:42:6:4:2:38:15.79%:28:1.2628E-2:45:32:18:14:39 0/0:60:1:0:1:19:5.26%:28:5E-1:46:18:9:9:19 0/0:36:2:2:0:38:5.26%:50:2.4667E-1:43:36:18:18:38 0/0:37:2:1:1:37:5.41%:50:2.4658E-1:44:35:13:22:37 0/0:36:3:2:1:35:8.57%:40:1.1957E-1:40:32:19:13:35 0/0:49:2:1:1:32:6.25%:40:2.4603E-1:44:30:15:15:33 0/0:60:2:0:2:27:7.41%:34:2.4528E-1:44:25:14:11:28 0/0:37:4:3:1:42:9.52%:43:5.801E-2:44:38:20:18:42 0/0:52:3:2:1:42:7.14%:49:1.2048E-1:46:39:22:17:43 0/0:60:3:0:3:36:8.33%:40:1.1972E-1:42:33:14:19:36 0/0:60:1:1:0:28:3.57%:41:5E-1:43:27:15:12:31 0/0:37:1:1:0:38:2.63%:58:5E-1:44:37:18:19:38 0/0:31:1:1:0:25:4%:38:5E-1:45:24:14:10:27 0/0:60:4:3:1:36:11.11%:34:5.7257E-2:46:32:13:19:37 0/0:47:4:4:0:39:10.26%:41:5.7662E-2:48:35:25:10:39 0/0:32:3:2:1:32:9.38%:34:1.1905E-1:42:29:18:11:33 0/0:60:1:1:0:40:2.5%:62:5E-1:46:39:18:21:42 0/0:0:0:0:0:22:0%:40:1E0:52:22:12:10:22 0/0:36:2:1:1:24:8.33%:27:2.4468E-1:45:22:12:10:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:60:3:0:3:24:12.5%:22:1.1702E-1:54:21:7:14:24 0/0:60:2:0:2:16:12.5%:15:2.4194E-1:51:14:8:6:16 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:17 0/0:35:3:2:1:34:8.82%:37:1.194E-1:43:31:18:13:39 0/0:36:3:1:2:29:10.34%:31:1.1842E-1:41:26:11:15:30 0/0:42:4:2:2:31:12.9%:29:5.6405E-2:44:27:16:11:31 0/0:47:2:2:0:25:8%:31:2.449E-1:49:23:11:12:25 0/0:36:3:3:0:23:13.04%:22:1.1667E-1:45:20:9:11:25 0/0:48:2:1:1:28:7.14%:34:2.4545E-1:44:26:14:12:28 0/0:38:1:0:1:24:4.17%:34:5E-1:41:23:11:12:24 0/0:37:1:0:1:34:2.94%:51:5E-1:45:33:17:16:34 0/0:48:2:2:0:42:4.76%:57:2.4699E-1:43:40:14:26:43 0/0:51:1:1:0:21:4.76%:31:5E-1:48:20:9:11:21 0/0:34:1:1:0:19:5.26%:28:5E-1:48:18:13:5:20 0/0:34:1:1:0:32:3.12%:48:5E-1:42:31:10:21:33 0/0:60:1:0:1:27:3.7%:41:5E-1:43:26:12:14:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:60:1:0:1:28:3.57%:41:5E-1:47:27:17:10:28 0/0:60:3:2:1:27:11.11%:28:1.1792E-1:49:24:16:8:27 0/0:49:2:1:1:37:5.41%:50:2.4658E-1:46:35:22:13:37 0/0:0:0:0:0:19:0%:37:1E0:50:19:8:11:20 0/0:44:3:3:0:40:7.5%:46:1.2025E-1:40:37:14:23:41 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:38:1:1:0:36:2.78%:55:5E-1:45:35:16:19:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:29 0/0:38:5:3:2:29:17.24%:22:2.5917E-2:38:24:12:12:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:38:1:1:0:37:2.7%:59:5E-1:43:36:19:17:40 0/0:37:1:1:0:42:2.38%:66:5E-1:44:41:19:22:43 0/0:34:2:2:0:22:9.09%:24:2.4419E-1:45:20:8:12:23 0/0:40:4:3:1:33:12.12%:32:5.6777E-2:46:29:11:18:33 0/0:35:5:5:0:35:14.29%:30:2.6822E-2:42:30:14:16:35 0/0:48:4:4:0:32:12.5%:29:5.6596E-2:43:28:12:16:36 0/0:40:4:4:0:22:18.18%:15:5.3885E-2:49:18:12:6:22 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:32 0/0:41:5:1:4:25:20%:17:2.5076E-2:46:20:14:6:26 0/0:60:1:1:0:33:3.03%:52:5E-1:41:32:19:13:34 0/0:45:5:3:2:37:13.51%:32:2.706E-2:45:32:15:17:38 0/0:35:5:5:0:33:15.15%:27:2.6557E-2:44:28:15:13:33 0/0:43:4:3:1:32:12.5%:29:5.6596E-2:46:28:15:13:32 0/0:52:3:3:0:29:10.34%:31:1.1842E-1:42:26:11:15:29 0/0:44:2:2:0:23:8.7%:28:2.4444E-1:41:21:13:8:23 0/0:47:6:6:0:35:17.14%:25:1.238E-2:46:29:10:19:35 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:38 0/0:45:3:2:1:36:8.33%:40:1.1972E-1:43:33:19:14:37 0/1:38:7:5:2:29:24.14%:22:5.1909E-3:40:22:13:9:29 0/0:44:3:3:0:29:10.34%:31:1.1842E-1:42:26:11:15:31 0/0:34:1:1:0:24:4.17%:34:5E-1:39:23:13:10:26 0/0:35:6:6:0:53:11.32%:50:1.3458E-2:40:47:27:20:53 0/0:37:3:3:0:43:6.98%:53:1.2059E-1:44:40:16:24:44 0/0:34:3:3:0:32:9.38%:34:1.1905E-1:46:29:18:11:33 0/0:42:3:3:0:31:9.68%:34:1.1885E-1:43:28:12:16:32 0/0:32:2:2:0:46:4.35%:63:2.4725E-1:42:44:22:22:52 0/0:37:2:2:0:29:6.9%:37:2.4561E-1:42:27:12:15:32 0/0:38:6:4:2:33:18.18%:23:1.219E-2:41:27:14:13:34 0/0:40:6:6:0:41:14.63%:33:1.2841E-2:39:35:21:14:41 0/0:42:4:2:2:36:11.11%:34:5.7257E-2:44:32:17:15:36 0/0:39:4:4:0:39:10.26%:41:5.7662E-2:42:35:17:18:40 0/0:34:3:3:0:45:6.67%:56:1.2079E-1:43:42:26:16:46 0/0:36:2:2:0:27:7.41%:34:2.4528E-1:44:25:11:14:27 0/0:32:4:4:0:28:14.29%:23:5.5746E-2:39:24:14:10:30 0/1:33:7:6:1:34:20.59%:22:5.5492E-3:43:27:14:13:36 0/0:36:6:6:0:36:16.67%:25:1.2467E-2:39:30:10:20:36 0/0:36:3:3:0:29:10.34%:31:1.1842E-1:39:26:10:16:31 0/0:37:2:2:0:28:7.14%:34:2.4545E-1:42:26:14:12:28 0/0:41:4:4:0:52:7.69%:59:5.8877E-2:39:48:24:24:57 0/0:44:3:3:0:51:5.88%:66:1.2129E-1:45:48:23:25:51 0/0:41:5:3:2:34:14.71%:27:2.6693E-2:40:29:12:17:36 0/0:47:2:2:0:37:5.41%:50:2.4658E-1:42:35:21:14:38 0/0:37:1:1:0:43:2.33%:70:5E-1:45:42:25:17:44 0/0:45:2:1:1:31:6.45%:40:2.459E-1:41:29:15:14:32 0/0:60:1:1:0:29:3.45%:45:5E-1:42:28:17:11:29 0/0:60:2:1:1:36:5.56%:47:2.4648E-1:42:34:21:13:37 0/0:37:4:3:1:27:14.81%:23:5.5494E-2:40:23:18:5:27 0/0:48:2:1:1:18:11.11%:18:2.4286E-1:42:16:7:9:18 0/0:48:2:1:1:34:5.88%:43:2.4627E-1:42:32:15:17:34 0/0:60:2:1:1:37:5.41%:50:2.4658E-1:43:35:19:16:37 0/0:56:3:1:2:51:5.88%:66:1.2129E-1:43:48:22:26:53 0/0:49:2:2:0:42:4.76%:57:2.4699E-1:37:40:19:21:44 MTB_anc 2866677 . A C . PASS AC=4;AF=0.013;AN=300;ANN=C|synonymous_variant|LOW|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.210A>C|p.Leu70Leu|210/660|210/660|70/219||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866677A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866677A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:36:1:1:0:50:2%:80:5E-1:45:49:28:21:50 0/0:60:1:0:1:17:5.88%:24:5E-1:53:16:9:7:17 0/0:41:5:4:1:53:9.43%:56:2.8317E-2:46:48:24:24:53 0/0:38:3:1:2:37:8.11%:43:1.1986E-1:45:34:16:18:38 0/0:39:3:1:2:34:8.82%:37:1.194E-1:44:31:17:14:34 0/0:42:3:2:1:30:10%:31:1.1864E-1:45:27:14:13:30 0/0:60:3:1:2:38:7.89%:43:1.2E-1:47:35:20:15:38 0/0:48:2:1:1:26:7.69%:30:2.451E-1:45:24:13:11:27 0/1:45:9:4:5:40:22.5%:29:1.1791E-3:46:31:11:20:40 0/0:60:1:0:1:24:4.17%:34:5E-1:53:23:10:13:26 0/0:60:3:2:1:30:10%:31:1.1864E-1:48:27:12:15:30 0/0:54:5:4:1:33:15.15%:27:2.6557E-2:47:28:14:14:33 0/0:60:3:3:0:25:12%:25:1.1735E-1:52:22:9:13:25 0/0:43:3:3:0:50:6%:62:1.2121E-1:43:47:29:18:50 0/0:48:2:1:1:20:10%:21:2.4359E-1:47:18:13:5:21 0/0:37:1:1:0:41:2.44%:66:5E-1:44:40:23:17:42 0/0:60:1:1:0:27:3.7%:41:5E-1:41:26:14:12:27 0/0:33:1:1:0:21:4.76%:31:5E-1:47:20:8:12:22 0/0:44:3:2:1:39:7.69%:47:1.2013E-1:46:36:19:17:39 0/0:52:3:3:0:27:11.11%:28:1.1792E-1:51:24:12:12:28 0/0:0:0:0:0:12:0%:21:1E0:43:12:5:7:12 0/0:52:3:3:0:42:7.14%:49:1.2048E-1:45:39:25:14:43 0/0:56:3:1:2:20:15%:16:1.1538E-1:45:17:12:5:20 0/0:60:2:0:2:36:5.56%:47:2.4648E-1:46:34:15:19:37 0/0:49:2:1:1:31:6.45%:40:2.459E-1:41:29:15:14:31 0/0:37:3:1:2:33:9.09%:37:1.1923E-1:46:30:16:14:33 0/0:49:2:2:0:27:7.41%:34:2.4528E-1:45:25:15:10:28 0/0:41:6:5:1:28:21.43%:16:1.1603E-2:52:22:12:10:28 0/0:44:3:0:3:29:10.34%:31:1.1842E-1:47:26:14:12:29 0/0:38:1:1:0:34:2.94%:51:5E-1:41:33:15:18:34 0/1:49:9:7:2:37:24.32%:29:1.1256E-3:43:28:14:14:38 0/0:36:2:2:0:22:9.09%:24:2.4419E-1:41:20:10:10:22 0/0:42:4:3:1:37:10.81%:38:5.7399E-2:47:33:20:13:37 0/0:45:2:2:0:29:6.9%:37:2.4561E-1:47:27:14:13:30 0/0:60:1:1:0:38:2.63%:58:5E-1:49:37:21:16:38 0/0:49:2:2:0:34:5.88%:43:2.4627E-1:46:32:14:18:34 0/0:52:3:2:1:42:7.14%:49:1.2048E-1:44:39:21:18:43 0/0:50:6:4:2:54:11.11%:50:1.3497E-2:46:48:29:19:54 0/0:45:2:1:1:35:5.71%:47:2.4638E-1:45:33:23:10:35 0/0:38:1:1:0:40:2.5%:62:5E-1:48:39:16:23:40 0/0:37:2:2:0:22:9.09%:24:2.4419E-1:43:20:12:8:22 0/0:60:2:0:2:44:4.55%:60:2.4713E-1:45:42:24:18:44 0/0:44:3:0:3:27:11.11%:28:1.1792E-1:43:24:15:9:27 0/0:38:1:1:0:21:4.76%:31:5E-1:48:20:8:12:21 0/0:49:2:1:1:41:4.88%:57:2.4691E-1:44:39:24:15:42 0/0:52:3:2:1:40:7.5%:46:1.2025E-1:41:37:21:16:40 0/0:38:1:0:1:31:3.23%:48:5E-1:45:30:18:12:32 0/0:41:6:5:1:39:15.38%:31:1.2702E-2:48:33:20:13:39 0/0:44:5:3:2:44:11.36%:41:2.7721E-2:45:39:20:19:44 0/0:60:1:0:1:49:2.04%:80:5E-1:47:48:23:25:49 0/0:48:2:1:1:28:7.14%:34:2.4545E-1:51:26:15:11:29 0/1:40:7:5:2:39:17.95%:22:5.8219E-3:45:32:17:15:39 0/0:60:1:0:1:20:5%:27:5E-1:45:19:10:9:20 0/0:37:2:2:0:39:5.13%:54:2.4675E-1:45:37:18:19:40 0/0:35:2:1:1:38:5.26%:50:2.4667E-1:45:36:14:22:38 0/0:37:3:2:1:34:8.82%:37:1.194E-1:42:31:19:12:34 0/0:49:2:1:1:33:6.06%:44:2.4615E-1:45:31:15:16:33 0/0:60:2:0:2:27:7.41%:34:2.4528E-1:44:25:14:11:27 0/0:38:3:2:1:40:7.5%:46:1.2025E-1:45:37:20:17:40 0/0:52:3:2:1:44:6.82%:53:1.2069E-1:45:41:24:17:44 0/0:60:3:0:3:36:8.33%:40:1.1972E-1:43:33:14:19:36 0/0:60:1:1:0:30:3.33%:44:5E-1:43:29:16:13:31 0/0:37:1:1:0:40:2.5%:62:5E-1:43:39:18:21:40 0/0:38:2:2:0:29:6.9%:37:2.4561E-1:44:27:16:11:29 0/0:60:4:3:1:37:10.81%:38:5.7399E-2:46:33:13:20:38 0/0:47:4:4:0:41:9.76%:44:5.79E-2:47:37:25:12:42 0/0:37:2:2:0:32:6.25%:40:2.4603E-1:42:30:20:10:33 0/0:60:1:1:0:40:2.5%:62:5E-1:46:39:19:20:41 0/0:0:0:0:0:22:0%:40:1E0:52:22:12:10:22 0/0:35:2:1:1:23:8.7%:28:2.4444E-1:45:21:11:10:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:60:1:0:1:22:4.55%:31:5E-1:54:21:6:15:23 0/0:60:2:0:2:15:13.33%:16:2.4138E-1:52:13:7:6:16 0/0:0:0:0:0:16:0%:29:1E0:51:16:7:9:16 0/0:49:2:1:1:37:5.41%:50:2.4658E-1:40:35:22:13:39 0/0:36:3:1:2:27:11.11%:28:1.1792E-1:43:24:10:14:28 0/0:43:4:2:2:32:12.5%:29:5.6596E-2:43:28:17:11:32 0/0:49:2:2:0:25:8%:31:2.449E-1:48:23:11:12:25 0/0:36:4:4:0:24:16.67%:18:5.461E-2:44:20:10:10:24 0/0:48:2:1:1:29:6.9%:37:2.4561E-1:44:27:15:12:29 0/0:38:1:0:1:24:4.17%:34:5E-1:43:23:11:12:24 0/0:38:1:0:1:36:2.78%:55:5E-1:45:35:17:18:36 0/0:49:2:2:0:41:4.88%:57:2.4691E-1:44:39:14:25:43 0/0:0:0:0:0:19:0%:37:1E0:50:19:8:11:20 0/0:32:1:1:0:19:5.26%:28:5E-1:48:18:13:5:19 0/0:38:1:1:0:34:2.94%:51:5E-1:41:33:11:22:34 0/0:60:1:0:1:27:3.7%:41:5E-1:44:26:11:15:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:23 0/0:60:1:0:1:29:3.45%:45:5E-1:47:28:18:10:29 0/0:60:3:2:1:27:11.11%:28:1.1792E-1:49:24:17:7:27 0/0:60:1:1:0:38:2.63%:58:5E-1:46:37:22:15:38 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:37:2:2:0:39:5.13%:54:2.4675E-1:40:37:14:23:40 0/0:38:1:1:0:30:3.33%:44:5E-1:42:29:15:14:31 0/0:38:1:1:0:35:2.86%:55:5E-1:44:34:15:19:36 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:28 0/0:40:5:3:2:28:17.86%:19:2.5729E-2:39:23:14:9:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:38:1:1:0:37:2.7%:59:5E-1:43:36:19:17:40 0/0:37:1:1:0:43:2.33%:70:5E-1:44:42:19:23:44 0/0:36:2:2:0:22:9.09%:24:2.4419E-1:44:20:8:12:23 0/0:43:4:3:1:34:11.76%:31:5.6946E-2:46:30:12:18:35 0/0:36:4:4:0:32:12.5%:29:5.6596E-2:44:28:13:15:35 0/0:46:5:5:0:35:14.29%:30:2.6822E-2:43:30:13:17:36 0/0:43:4:4:0:23:17.39%:18:5.4264E-2:50:19:13:6:23 0/0:38:1:1:0:30:3.33%:44:5E-1:47:29:12:17:31 0/0:38:4:1:3:26:15.38%:20:5.5222E-2:44:22:15:7:26 0/0:60:1:1:0:35:2.86%:55:5E-1:44:34:20:14:36 0/0:45:6:4:2:39:15.38%:31:1.2702E-2:45:33:16:17:39 0/0:36:5:5:0:33:15.15%:27:2.6557E-2:43:28:15:13:33 0/0:43:4:3:1:30:13.33%:26:5.62E-2:48:26:13:13:31 0/0:52:3:3:0:29:10.34%:31:1.1842E-1:44:26:11:15:29 0/0:49:2:2:0:25:8%:31:2.449E-1:40:23:14:9:26 0/0:48:6:6:0:37:16.22%:28:1.2549E-2:44:31:10:21:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:49:2:2:0:34:5.88%:43:2.4627E-1:45:32:18:14:37 0/0:41:6:5:1:29:20.69%:18:1.1736E-2:41:23:12:11:30 0/0:43:3:3:0:30:10%:31:1.1864E-1:44:27:11:16:31 0/0:37:1:1:0:23:4.35%:34:5E-1:41:22:12:10:25 0/0:36:5:5:0:50:10%:49:2.8142E-2:40:45:26:19:53 0/0:37:3:3:0:45:6.67%:56:1.2079E-1:44:42:16:26:46 0/0:37:3:3:0:33:9.09%:37:1.1923E-1:45:30:18:12:33 0/0:44:3:3:0:31:9.68%:34:1.1885E-1:43:28:14:14:32 0/0:36:2:2:0:52:3.85%:74:2.4757E-1:41:50:22:28:53 0/0:37:2:2:0:33:6.06%:44:2.4615E-1:40:31:13:18:33 0/1:39:7:5:2:34:20.59%:22:5.5492E-3:42:27:14:13:34 0/0:41:5:5:0:39:12.82%:35:2.7273E-2:41:34:20:14:40 0/0:43:4:2:2:36:11.11%:34:5.7257E-2:43:32:18:14:36 0/0:38:4:4:0:39:10.26%:41:5.7662E-2:43:35:17:18:40 0/0:31:3:3:0:48:6.25%:59:1.2105E-1:42:45:29:16:50 0/0:37:2:2:0:27:7.41%:34:2.4528E-1:44:25:11:14:28 0/0:37:3:3:0:29:10.34%:31:1.1842E-1:38:26:14:12:30 0/0:35:6:5:1:34:17.65%:23:1.2287E-2:43:28:14:14:37 0/0:37:6:6:0:33:18.18%:23:1.219E-2:40:27:10:17:34 0/0:35:2:2:0:33:6.06%:44:2.4615E-1:39:31:11:20:34 0/0:34:2:2:0:28:7.14%:34:2.4545E-1:42:26:14:12:28 0/0:44:3:3:0:56:5.36%:72:1.2162E-1:40:53:26:27:58 0/0:44:3:3:0:54:5.56%:69:1.215E-1:46:51:25:26:54 0/0:40:6:4:2:36:16.67%:25:1.2467E-2:42:30:13:17:36 0/0:48:2:2:0:42:4.76%:57:2.4699E-1:44:40:24:16:42 0/0:36:2:2:0:44:4.55%:60:2.4713E-1:44:42:24:18:45 0/0:47:2:1:1:32:6.25%:40:2.4603E-1:41:30:15:15:33 0/0:60:1:1:0:29:3.45%:45:5E-1:42:28:17:11:29 0/0:60:2:1:1:37:5.41%:50:2.4658E-1:43:35:22:13:39 0/0:37:4:3:1:26:15.38%:20:5.5222E-2:39:22:17:5:27 0/0:48:2:1:1:17:11.76%:18:2.4242E-1:44:15:7:8:17 0/0:48:2:1:1:35:5.71%:47:2.4638E-1:43:33:15:18:35 0/0:60:2:1:1:37:5.41%:50:2.4658E-1:43:35:19:16:37 0/0:60:3:1:2:51:5.88%:66:1.2129E-1:44:48:22:26:52 0/0:47:2:2:0:44:4.55%:60:2.4713E-1:39:42:18:24:46 MTB_anc 2866863 . C G . PASS AC=74;AF=0.247;AN=300;ANN=G|synonymous_variant|LOW|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.396C>G|p.Ala132Ala|396/660|396/660|132/219||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866863C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866863C>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:15:9:6:54:27.78%:50:9.8829E-6:43:39:23:16:55 0/0:36:3:2:1:18:16.67%:14:1.1429E-1:46:15:9:6:18 0/1:44:14:8:6:44:31.82%:47:1.7873E-5:49:30:19:11:44 0/1:43:7:3:4:37:18.92%:22:5.721E-3:48:30:17:13:37 0/0:47:4:3:1:27:14.81%:23:5.5494E-2:44:23:12:11:27 0/0:44:6:3:3:28:21.43%:16:1.1603E-2:47:22:10:12:29 0/0:41:6:3:3:34:17.65%:23:1.2287E-2:47:28:18:10:34 0/0:41:4:4:0:20:20%:13:5.3015E-2:44:16:12:4:20 0/0:43:4:3:1:36:11.11%:34:5.7257E-2:47:32:18:14:37 0/0:46:5:2:3:18:27.78%:8:2.2727E-2:49:13:7:6:19 0/1:44:8:7:1:29:27.59%:26:2.2392E-3:49:21:11:10:30 0/1:35:7:5:2:38:18.42%:22:5.7727E-3:43:31:20:11:39 0/1:49:7:6:1:23:30.43%:23:4.5803E-3:50:16:7:9:23 0/1:41:9:7:2:46:19.57%:28:1.2682E-3:48:37:17:20:48 0/0:39:6:3:3:28:21.43%:16:1.1603E-2:42:22:14:8:29 0/0:24:1:0:1:34:2.94%:51:5E-1:44:33:19:14:35 0/0:46:2:1:1:25:8%:31:2.449E-1:48:23:12:11:26 0/0:0:0:0:0:13:0%:25:1E0:45:13:6:7:13 0/1:44:7:6:1:27:25.93%:22:5.0143E-3:50:20:12:8:28 0/0:38:2:2:0:24:8.33%:27:2.4468E-1:48:22:11:11:24 0/0:52:3:3:0:16:18.75%:11:1.129E-1:48:13:6:7:18 0/1:40:13:7:6:59:22.03%:42:5.818E-5:45:46:30:16:59 0/0:55:5:2:3:16:31.25%:6:2.1691E-2:41:11:5:6:16 0/1:43:7:5:2:28:25%:22:5.1054E-3:47:21:13:8:28 0/0:45:6:5:1:36:16.67%:25:1.2467E-2:43:30:15:15:37 0/0:49:2:1:1:28:7.14%:34:2.4545E-1:45:26:13:13:28 0/0:42:5:5:0:26:19.23%:17:2.531E-2:47:21:13:8:27 0/1:42:11:5:6:33:33.33%:37:1.8019E-4:43:22:10:12:34 0/0:45:6:3:3:26:23.08%:13:1.1309E-2:47:20:14:6:27 0/0:41:5:4:1:27:18.52%:19:2.5527E-2:46:22:11:11:29 0/1:42:8:3:5:39:20.51%:25:2.624E-3:43:31:14:17:39 0/0:37:5:3:2:26:19.23%:17:2.531E-2:44:21:13:8:26 0/0:43:4:2:2:24:16.67%:18:5.461E-2:45:20:11:9:25 0/1:43:7:4:3:27:25.93%:22:5.0143E-3:44:20:13:7:28 0/1:43:7:5:2:32:21.88%:22:5.4182E-3:47:25:18:7:33 0/0:45:3:1:2:30:10%:31:1.1864E-1:45:27:17:10:30 0/0:41:6:2:4:42:14.29%:33:1.2905E-2:44:36:23:13:43 0/1:46:10:5:5:54:18.52%:32:6.18E-4:47:44:32:12:55 0/1:44:9:5:4:40:22.5%:29:1.1791E-3:47:31:23:8:40 0/1:37:9:6:3:43:20.93%:29:1.2263E-3:47:34:22:12:43 0/1:39:10:4:6:29:34.48%:34:3.8387E-4:43:19:13:6:30 0/1:40:8:5:3:41:19.51%:25:2.6808E-3:45:33:19:14:41 0/0:49:4:4:0:25:16%:21:5.4928E-2:44:21:14:7:27 0/0:48:4:1:3:26:15.38%:20:5.5222E-2:42:22:11:11:26 0/0:42:5:2:3:30:16.67%:21:2.6093E-2:41:25:13:12:31 0/1:36:8:6:2:38:21.05%:25:2.5935E-3:45:30:19:11:38 0/0:45:3:3:0:22:13.64%:19:1.1628E-1:43:19:5:14:24 0/1:39:8:5:3:35:22.86%:26:2.4931E-3:47:27:20:7:37 0/0:39:5:4:1:40:12.5%:35:2.7371E-2:39:35:18:17:40 0/1:49:11:5:6:31:35.48%:37:1.6659E-4:43:20:15:5:31 0/0:38:3:1:2:24:12.5%:22:1.1702E-1:42:21:15:6:24 0/1:41:8:4:4:43:18.6%:25:2.7329E-3:41:35:18:17:44 0/0:32:3:0:3:20:15%:16:1.1538E-1:43:17:10:7:20 0/0:49:4:3:1:35:11.43%:31:5.6946E-2:44:30:15:15:35 0/1:45:6:5:1:19:31.58%:20:9.828E-3:45:13:6:7:20 0/1:39:9:7:2:33:27.27%:29:1.042E-3:44:24:12:12:36 0/0:41:6:6:0:30:20%:18:1.186E-2:44:24:13:11:31 0/0:47:4:4:0:20:20%:13:5.3015E-2:40:16:10:6:21 0/1:42:9:6:3:33:27.27%:29:1.042E-3:44:24:9:15:33 0/0:49:2:2:0:29:6.9%:37:2.4561E-1:45:27:17:10:29 0/1:43:7:3:4:21:33.33%:23:4.3101E-3:46:14:8:6:21 0/1:45:9:7:2:30:30%:30:9.678E-4:43:21:16:5:30 0/1:45:10:8:2:36:27.78%:33:4.7404E-4:44:26:16:10:37 0/0:36:5:4:1:24:20.83%:14:2.4823E-2:43:19:11:8:24 0/0:46:5:2:3:32:15.62%:24:2.6412E-2:45:27:12:15:33 0/1:41:11:10:1:43:25.58%:36:2.3512E-4:45:32:21:11:43 0/0:43:4:2:2:38:10.53%:37:5.7534E-2:46:34:22:12:39 0/0:45:3:3:0:31:9.68%:34:1.1885E-1:43:28:17:11:31 0/0:60:1:1:0:12:8.33%:14:5E-1:41:11:7:4:12 0/1:49:7:3:4:34:21.21%:22:5.4855E-3:51:26:14:12:34 0/0:41:5:2:3:28:17.86%:19:2.5729E-2:47:23:13:10:30 0/0:48:6:5:1:21:28.57%:9:1.0344E-2:47:15:8:7:21 0/0:37:4:1:3:17:23.53%:11:5.132E-2:51:13:8:5:17 0/0:45:3:1:2:28:10.71%:28:1.1818E-1:46:25:16:9:28 0/1:41:7:4:3:39:17.95%:22:5.8219E-3:41:32:18:14:40 0/0:45:5:1:4:35:14.29%:30:2.6822E-2:46:30:14:16:35 0/0:41:5:2:3:25:20%:17:2.5076E-2:38:20:11:9:25 0/0:38:2:1:1:22:9.09%:24:2.4419E-1:47:20:12:8:22 0/0:45:5:2:3:28:17.86%:19:2.5729E-2:42:23:10:13:28 0/0:37:6:4:2:24:25%:11:1.0968E-2:45:18:7:11:24 0/1:36:12:9:3:36:33.33%:40:8.1472E-5:46:24:12:12:37 0/1:43:12:6:6:46:26.09%:39:1.0724E-4:42:34:15:19:48 0/0:41:5:4:1:29:17.24%:22:2.5917E-2:43:24:13:11:29 0/0:38:2:2:0:23:8.7%:28:2.4444E-1:45:21:12:9:23 0/0:48:4:3:1:23:17.39%:18:5.4264E-2:50:19:14:5:23 0/0:38:3:3:0:25:12%:25:1.1735E-1:42:22:14:8:25 0/1:40:9:8:1:34:26.47%:29:1.0644E-3:44:25:13:12:35 0/0:52:3:1:2:20:15%:16:1.1538E-1:47:17:9:8:21 0/1:45:8:3:5:20:40%:27:1.638E-3:53:12:7:5:20 0/0:44:3:2:1:18:16.67%:14:1.1429E-1:50:15:13:2:20 0/0:41:5:3:2:29:17.24%:22:2.5917E-2:46:24:16:8:29 0/0:52:6:4:2:20:30%:7:1.0098E-2:49:14:8:6:21 0/1:41:7:6:1:33:21.21%:22:5.4855E-3:41:26:15:11:34 0/1:42:8:5:3:25:32%:26:2.0146E-3:42:17:10:7:25 0/1:37:7:5:2:32:21.88%:22:5.3469E-3:42:24:14:10:32 0/1:36:9:6:3:40:22.5%:29:1.1791E-3:47:31:14:17:40 0/0:48:6:5:1:28:21.43%:16:1.1603E-2:40:22:15:7:28 0/0:48:6:5:1:32:18.75%:20:1.1977E-2:39:25:14:11:32 0/0:37:4:2:2:28:14.29%:23:5.5746E-2:43:24:12:12:33 0/1:43:7:3:4:34:20.59%:22:5.5492E-3:42:27:10:17:34 0/0:46:5:3:2:22:22.73%:12:2.4248E-2:45:17:13:4:22 0/1:38:7:6:1:41:17.07%:22:5.9136E-3:38:34:18:16:42 0/0:37:3:1:2:20:15%:16:1.1538E-1:38:17:12:5:21 0/1:43:11:5:6:30:36.67%:37:1.594E-4:41:19:13:6:32 0/0:45:5:3:2:18:27.78%:8:2.2727E-2:42:13:7:6:18 0/0:49:5:3:2:29:17.24%:22:2.5917E-2:45:24:18:6:29 0/0:41:6:4:2:28:21.43%:16:1.1603E-2:46:22:14:8:29 0/0:46:5:3:2:29:17.24%:22:2.5917E-2:46:24:13:11:29 0/0:36:6:2:4:32:18.75%:20:1.2087E-2:50:26:18:8:32 0/1:41:11:6:5:36:30.56%:37:1.9879E-4:43:25:19:6:36 0/0:45:6:3:3:27:22.22%:16:1.1461E-2:40:21:10:11:27 0/1:44:10:2:8:30:33.33%:33:3.9851E-4:44:20:9:11:30 0/0:40:6:3:3:26:23.08%:13:1.1309E-2:41:20:12:8:26 0/1:37:10:8:2:37:27.03%:33:4.8486E-4:45:27:12:15:37 0/1:45:10:6:4:42:23.81%:32:5.3293E-4:41:32:18:14:44 0/1:36:8:7:1:41:19.51%:25:2.6808E-3:41:33:19:14:41 0/1:36:9:7:2:35:25.71%:29:1.0857E-3:41:26:11:15:40 0/0:51:5:4:1:29:17.24%:22:2.5917E-2:41:24:12:12:30 0/0:42:3:1:2:23:13.04%:22:1.1667E-1:42:20:10:10:23 0/1:37:12:7:5:59:20.34%:38:1.3121E-4:42:47:28:19:60 0/1:41:10:9:1:47:21.28%:32:5.7272E-4:44:37:20:17:48 0/1:38:7:5:2:31:22.58%:22:5.3469E-3:44:24:19:5:32 0/1:42:9:7:2:33:27.27%:29:1.042E-3:41:24:10:14:33 0/1:42:12:8:4:41:29.27%:40:9.5339E-5:41:29:22:7:44 0/1:43:9:3:6:40:22.5%:29:1.1791E-3:40:31:16:15:40 0/1:37:13:7:6:25:52%:48:1.4654E-5:38:12:5:7:26 0/1:36:10:4:6:43:23.26%:32:5.4148E-4:38:33:21:12:44 0/0:42:5:4:1:32:15.62%:24:2.6412E-2:45:27:20:7:32 0/1:49:8:4:4:36:22.22%:25:2.5282E-3:41:28:21:7:36 0/0:35:6:4:2:46:13.04%:39:1.3136E-2:41:40:21:19:49 0/1:35:7:6:1:25:28%:23:4.8126E-3:40:18:6:12:27 0/1:36:9:5:4:33:27.27%:29:1.042E-3:38:24:14:10:34 0/0:41:6:2:4:31:19.35%:20:1.1977E-2:43:25:18:7:33 0/1:37:7:4:3:26:26.92%:23:4.9169E-3:39:19:9:10:26 0/1:40:10:4:6:32:31.25%:33:4.259E-4:41:22:13:9:32 0/1:36:9:4:5:30:30%:30:9.678E-4:39:21:13:8:30 0/1:35:7:5:2:59:11.86%:21:6.4707E-3:40:52:24:28:60 0/1:47:9:5:4:35:25.71%:29:1.0857E-3:44:26:15:11:36 0/1:36:8:6:2:34:23.53%:26:2.4562E-3:42:26:10:16:34 0/1:37:10:5:5:51:19.61%:32:5.9987E-4:43:41:23:18:51 0/0:38:6:4:2:41:14.63%:33:1.2841E-2:43:35:21:14:41 0/1:39:7:3:4:32:21.88%:22:5.4182E-3:42:25:14:11:32 0/0:35:5:2:3:25:20%:17:2.5076E-2:42:20:11:9:25 0/1:37:7:3:4:31:22.58%:22:5.3469E-3:42:24:13:11:31 0/1:44:9:6:3:32:28.12%:29:1.0185E-3:45:23:16:7:32 0/0:45:3:2:1:23:13.04%:22:1.1667E-1:45:20:10:10:23 0/1:43:8:2:6:41:19.51%:25:2.6808E-3:41:33:16:17:41 0/1:38:9:7:2:40:22.5%:29:1.1791E-3:38:31:20:11:40 0/1:41:9:5:4:45:20%:29:1.2547E-3:42:36:24:12:47 0/1:39:10:4:6:40:25%:32:5.1483E-4:43:30:18:12:41 MTB_anc 2866876 . A G . PASS AC=87;AF=0.290;AN=300;ANN=G|missense_variant|MODERATE|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.409A>G|p.Ile137Val|409/660|409/660|137/219||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866876A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866876A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:17:10:7:56:30.36%:57:1.8236E-6:42:39:22:17:57 0/0:43:4:2:2:17:23.53%:11:5.132E-2:46:13:8:5:18 0/1:49:14:8:6:43:32.56%:47:1.727E-5:49:29:19:10:43 0/1:44:7:3:4:38:18.42%:22:5.7727E-3:49:31:18:13:39 0/0:47:4:3:1:26:15.38%:20:5.5222E-2:42:22:11:11:29 0/1:43:8:4:4:30:26.67%:26:2.2875E-3:46:22:11:11:30 0/0:40:6:3:3:32:18.75%:20:1.2087E-2:46:26:16:10:33 0/0:46:5:5:0:22:22.73%:12:2.4248E-2:45:17:13:4:23 0/0:53:6:3:3:37:16.22%:28:1.2549E-2:47:31:17:14:38 0/0:45:6:3:3:20:30%:7:1.0098E-2:47:14:8:6:20 0/1:48:8:7:1:27:29.63%:26:2.1337E-3:50:19:10:9:27 0/1:37:8:5:3:40:20%:25:2.653E-3:43:32:21:11:43 0/1:48:10:8:2:28:35.71%:34:3.6855E-4:47:18:7:11:28 0/1:42:11:8:3:45:24.44%:36:2.4398E-4:49:34:18:16:45 0/1:40:7:3:4:29:24.14%:22:5.1909E-3:44:22:14:8:30 0/0:49:2:1:1:34:5.88%:43:2.4627E-1:44:32:19:13:34 0/0:44:3:1:2:26:11.54%:25:1.1765E-1:48:23:13:10:26 0/0:37:1:1:0:14:7.14%:17:5E-1:46:13:6:7:14 0/1:43:8:6:2:27:29.63%:26:2.1337E-3:49:19:11:8:29 0/0:38:2:2:0:23:8.7%:28:2.4444E-1:48:21:11:10:23 0/0:52:3:3:0:17:17.65%:14:1.1364E-1:47:14:5:9:18 0/1:44:15:9:6:58:25.86%:49:1.0808E-5:46:43:30:13:61 0/0:55:5:2:3:16:31.25%:6:2.1691E-2:43:11:5:6:16 0/1:46:8:5:3:26:30.77%:26:2.076E-3:48:18:10:8:27 0/1:43:7:6:1:37:18.92%:22:5.721E-3:42:30:15:15:37 0/0:51:3:1:2:29:10.34%:31:1.1842E-1:47:26:12:14:29 0/0:45:6:5:1:29:20.69%:18:1.1736E-2:47:23:14:9:29 0/1:44:11:5:6:33:33.33%:37:1.8019E-4:43:22:10:12:33 0/0:44:6:3:3:23:26.09%:11:1.0777E-2:48:17:12:5:25 0/0:41:6:5:1:29:20.69%:18:1.1736E-2:45:23:11:12:29 0/1:42:8:3:5:35:22.86%:26:2.4931E-3:45:27:14:13:35 0/0:42:4:3:1:26:15.38%:20:5.5222E-2:45:22:13:9:26 0/0:43:4:2:2:26:15.38%:20:5.5222E-2:48:22:11:11:28 0/1:46:7:4:3:27:25.93%:22:5.0143E-3:47:20:13:7:29 0/1:49:7:5:2:34:20.59%:22:5.5492E-3:47:27:20:7:35 0/0:42:5:2:3:31:16.13%:24:2.6257E-2:44:26:15:11:31 0/0:49:6:2:4:42:14.29%:33:1.2905E-2:44:36:23:13:43 0/1:45:11:6:5:56:19.64%:35:2.8374E-4:47:45:32:13:56 0/1:44:11:6:5:41:26.83%:36:2.2563E-4:48:30:23:7:41 0/1:41:8:5:3:38:21.05%:25:2.5935E-3:51:30:20:10:41 0/1:40:10:4:6:33:30.3%:33:4.3872E-4:44:23:15:8:33 0/1:41:8:5:3:39:20.51%:25:2.624E-3:46:31:18:13:39 0/0:51:5:4:1:28:17.86%:19:2.5729E-2:43:23:16:7:29 0/0:49:4:1:3:25:16%:21:5.4928E-2:44:21:12:9:25 0/0:44:4:2:2:29:13.79%:26:5.5981E-2:40:25:12:13:29 0/1:38:9:6:3:40:22.5%:29:1.1791E-3:45:31:20:11:41 0/0:49:4:4:0:23:17.39%:18:5.4264E-2:43:19:5:14:25 0/1:39:9:5:4:32:28.12%:29:1.0185E-3:47:23:17:6:33 0/1:41:7:5:2:41:17.07%:22:5.9136E-3:42:34:17:17:44 0/1:49:12:6:6:30:40%:42:6.1809E-5:43:18:14:4:31 0/0:43:4:2:2:25:16%:21:5.4928E-2:45:21:16:5:25 0/1:42:10:4:6:41:24.39%:32:5.2405E-4:43:31:15:16:43 0/0:37:4:1:3:19:21.05%:13:5.251E-2:46:15:9:6:20 0/0:46:5:3:2:39:12.82%:35:2.7273E-2:43:34:17:17:39 0/0:45:6:5:1:20:30%:7:1.0098E-2:42:14:6:8:20 0/1:40:11:8:3:39:28.21%:36:2.1547E-4:44:28:14:14:39 0/1:41:7:6:1:32:21.88%:22:5.4182E-3:43:25:13:12:34 0/0:40:5:5:0:22:22.73%:12:2.4248E-2:41:17:10:7:23 0/1:43:10:7:3:37:27.03%:33:4.8486E-4:46:27:9:18:37 0/0:49:2:2:0:30:6.67%:37:2.4576E-1:44:28:19:9:30 0/1:49:8:4:4:24:33.33%:27:1.949E-3:46:16:10:6:24 0/1:45:10:7:3:30:33.33%:33:3.9851E-4:43:20:16:4:32 0/1:46:11:9:2:32:34.38%:37:1.7351E-4:47:21:12:9:33 0/0:38:5:4:1:23:21.74%:14:2.4548E-2:45:18:12:6:23 0/0:46:5:2:3:34:14.71%:27:2.6693E-2:44:29:13:16:34 0/1:41:14:12:2:43:32.56%:47:1.727E-5:47:29:20:9:44 0/0:41:5:2:3:36:13.89%:29:2.6944E-2:45:31:21:10:38 0/0:46:3:3:0:29:10.34%:31:1.1842E-1:43:26:17:9:29 0/0:60:1:1:0:12:8.33%:14:5E-1:42:11:7:4:12 0/1:49:8:3:5:35:22.86%:26:2.4562E-3:53:26:13:13:36 0/0:45:6:3:3:30:20%:18:1.186E-2:47:24:15:9:31 0/1:52:8:6:2:25:32%:26:2.0146E-3:46:17:9:8:25 0/0:38:5:2:3:16:31.25%:6:2.1691E-2:52:11:7:4:16 0/0:47:4:2:2:27:14.81%:23:5.5494E-2:48:23:13:10:27 0/1:39:9:5:4:41:21.95%:29:1.1955E-3:43:32:18:14:42 0/0:46:5:1:4:33:15.15%:27:2.6557E-2:47:28:12:16:33 0/0:47:5:2:3:22:22.73%:12:2.4248E-2:39:17:9:8:22 0/0:46:5:4:1:23:21.74%:14:2.4548E-2:49:18:10:8:23 0/0:46:5:2:3:30:16.67%:21:2.6093E-2:42:25:12:13:30 0/1:41:7:5:2:23:30.43%:23:4.5803E-3:46:16:6:10:25 0/1:38:13:9:4:35:37.14%:45:3.1103E-5:45:22:9:13:36 0/1:43:13:7:6:51:25.49%:42:5.092E-5:42:38:18:20:52 0/0:43:5:4:1:24:20.83%:14:2.4823E-2:46:19:11:8:24 0/0:37:2:2:0:22:9.09%:24:2.4419E-1:46:20:12:8:22 0/0:49:4:3:1:23:17.39%:18:5.4264E-2:50:19:14:5:23 0/0:38:4:4:0:27:14.81%:23:5.5494E-2:43:23:15:8:27 0/1:40:11:9:2:35:31.43%:37:1.9282E-4:46:24:12:12:36 0/0:45:6:3:3:22:27.27%:9:1.057E-2:48:16:9:7:22 0/1:45:9:3:6:20:45%:32:6.1425E-4:52:11:6:5:20 0/0:44:3:2:1:19:15.79%:17:1.1486E-1:50:16:12:4:19 0/0:40:5:3:2:26:19.23%:17:2.531E-2:48:21:13:8:26 0/1:52:6:4:2:19:31.58%:20:9.828E-3:51:13:6:7:20 0/1:41:8:7:1:36:22.22%:25:2.5282E-3:40:28:15:13:37 0/1:43:8:5:3:25:32%:26:2.0146E-3:44:17:11:6:25 0/1:39:9:5:4:34:26.47%:29:1.0644E-3:43:25:15:10:34 0/1:40:10:7:3:41:24.39%:32:5.2405E-4:48:31:15:16:42 0/1:46:8:6:2:30:26.67%:26:2.2875E-3:42:22:14:8:30 0/1:44:9:7:2:31:29.03%:30:9.9376E-4:41:22:12:10:32 0/0:40:5:3:2:33:15.15%:27:2.6557E-2:43:28:12:16:34 0/1:43:8:4:4:32:25%:26:2.3764E-3:42:24:8:16:32 0/0:45:6:3:3:23:26.09%:11:1.0777E-2:42:17:12:5:23 0/1:41:7:6:1:38:18.42%:22:5.7727E-3:39:31:18:13:39 0/0:36:5:1:4:22:22.73%:12:2.4248E-2:37:17:12:5:23 0/1:43:13:5:8:32:40.62%:45:2.6443E-5:42:19:11:8:33 0/0:46:5:3:2:15:33.33%:6:2.1073E-2:45:10:5:5:15 0/0:52:6:3:3:31:19.35%:20:1.1977E-2:44:25:20:5:31 0/0:43:6:3:3:30:20%:18:1.186E-2:46:24:16:8:30 0/0:45:6:4:2:31:19.35%:20:1.1977E-2:46:25:13:12:31 0/1:37:8:3:5:36:22.22%:25:2.5282E-3:50:28:19:9:36 0/1:42:14:8:6:35:40%:49:1.2005E-5:43:21:15:6:37 0/0:44:6:3:3:24:25%:11:1.0968E-2:41:18:10:8:26 0/1:46:10:2:8:29:34.48%:34:3.8387E-4:45:19:7:12:29 0/0:43:6:3:3:24:25%:11:1.0968E-2:44:18:11:7:24 0/1:38:10:8:2:39:25.64%:32:5.0524E-4:45:29:14:15:39 0/1:45:12:7:5:45:26.67%:39:1.05E-4:41:33:18:15:46 0/1:37:8:6:2:39:20.51%:25:2.624E-3:44:31:17:14:40 0/1:40:12:8:4:39:30.77%:40:9.0046E-5:44:27:11:16:40 0/0:51:5:4:1:26:19.23%:17:2.531E-2:42:21:10:11:28 0/0:43:4:2:2:23:17.39%:18:5.4264E-2:40:19:9:10:25 0/1:38:13:8:5:62:20.97%:42:6.0557E-5:42:49:29:20:62 0/1:41:12:9:3:45:26.67%:39:1.05E-4:46:33:19:14:45 0/1:38:7:5:2:31:22.58%:22:5.3469E-3:45:24:19:5:31 0/1:44:10:7:3:33:30.3%:33:4.3872E-4:43:23:10:13:35 0/1:43:14:8:6:40:35%:48:1.5388E-5:40:26:20:6:45 0/1:43:10:4:6:39:25.64%:32:5.0524E-4:39:29:17:12:41 0/1:39:12:6:6:25:48%:43:4.2836E-5:38:13:5:8:26 0/1:37:10:4:6:45:22.22%:32:5.5766E-4:40:35:20:15:46 0/1:40:8:4:4:35:22.86%:26:2.4931E-3:44:27:20:7:36 0/1:51:8:4:4:33:24.24%:26:2.4173E-3:42:25:19:6:35 0/0:38:5:3:2:40:12.5%:35:2.7371E-2:43:35:19:16:45 0/1:37:9:7:2:29:31.03%:30:9.4048E-4:41:20:7:13:30 0/1:38:8:5:3:35:22.86%:26:2.4931E-3:38:27:15:12:39 0/1:40:7:2:5:31:22.58%:22:5.3469E-3:44:24:15:9:35 0/1:40:7:4:3:26:26.92%:23:4.9169E-3:39:19:11:8:26 0/1:44:10:4:6:30:33.33%:33:3.9851E-4:44:20:11:9:32 0/1:37:9:4:5:27:33.33%:30:8.8132E-4:39:18:11:7:27 0/1:38:9:6:3:59:15.25%:28:1.4054E-3:41:50:22:28:62 0/1:49:10:5:5:32:31.25%:33:4.259E-4:45:22:10:12:32 0/1:40:8:6:2:33:24.24%:26:2.4173E-3:43:25:11:14:33 0/1:40:11:5:6:49:22.45%:35:2.6004E-4:44:38:22:16:49 0/1:37:7:5:2:45:15.56%:22:6.0738E-3:42:38:23:15:45 0/1:41:7:3:4:30:23.33%:22:5.2713E-3:41:23:14:9:31 0/0:37:5:2:3:25:20%:17:2.5076E-2:42:20:12:8:25 0/1:41:8:3:5:35:22.86%:26:2.4931E-3:41:27:15:12:35 0/1:46:10:7:3:34:29.41%:33:4.51E-4:45:24:17:7:34 0/0:49:4:3:1:24:16.67%:18:5.461E-2:47:20:10:10:24 0/1:41:8:2:6:38:21.05%:25:2.5935E-3:43:30:15:15:40 0/1:40:9:7:2:37:24.32%:29:1.1256E-3:39:28:18:10:37 0/1:44:10:6:4:45:22.22%:32:5.5766E-4:42:35:22:13:45 0/1:41:11:5:6:40:27.5%:36:2.2064E-4:43:29:17:12:40 MTB_anc 2866880 . C T . PASS AC=88;AF=0.293;AN=300;ANN=T|missense_variant|MODERATE|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.413C>T|p.Ala138Val|413/660|413/660|138/219||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866880C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866880C>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:17:10:7:55:30.91%:57:1.768E-6:43:38:22:16:56 0/0:43:4:3:1:17:23.53%:11:5.132E-2:49:13:8:5:18 0/1:48:14:8:6:43:32.56%:47:1.727E-5:48:29:19:10:43 0/1:44:7:3:4:39:17.95%:22:5.8219E-3:48:32:19:13:39 0/0:48:4:3:1:27:14.81%:23:5.5494E-2:41:23:11:12:29 0/1:41:9:5:4:31:29.03%:30:9.9376E-4:46:22:11:11:31 0/0:40:6:3:3:33:18.18%:23:1.219E-2:47:27:16:11:34 0/0:45:5:5:0:23:21.74%:14:2.4548E-2:45:18:13:5:23 0/0:52:6:3:3:35:17.14%:25:1.238E-2:46:29:16:13:36 0/0:49:6:3:3:20:30%:7:1.0098E-2:46:14:8:6:20 0/1:46:8:7:1:28:28.57%:26:2.188E-3:50:20:10:10:28 0/1:36:9:5:4:40:22.5%:29:1.1791E-3:45:31:21:10:42 0/1:47:10:8:2:25:40%:34:3.1821E-4:47:15:5:10:27 0/1:41:11:8:3:46:23.91%:36:2.4819E-4:48:35:19:16:46 0/1:38:7:3:4:29:24.14%:22:5.1909E-3:42:22:15:7:29 0/0:49:2:1:1:34:5.88%:43:2.4627E-1:43:32:18:14:36 0/0:45:3:1:2:26:11.54%:25:1.1765E-1:46:23:13:10:26 0/0:34:1:1:0:14:7.14%:17:5E-1:41:13:6:7:14 0/1:47:7:6:1:26:26.92%:23:4.9169E-3:49:19:11:8:27 0/0:38:2:2:0:23:8.7%:28:2.4444E-1:46:21:11:10:23 0/0:52:3:3:0:18:16.67%:14:1.1429E-1:45:15:6:9:19 0/1:42:15:9:6:60:25%:49:1.1245E-5:45:45:29:16:60 0/0:55:5:2:3:16:31.25%:6:2.1691E-2:48:11:5:6:16 0/1:44:9:6:3:28:32.14%:30:9.1169E-4:49:19:11:8:28 0/1:46:7:6:1:37:18.92%:22:5.721E-3:42:30:15:15:37 0/0:51:3:1:2:29:10.34%:31:1.1842E-1:46:26:12:14:29 0/0:45:6:5:1:29:20.69%:18:1.1736E-2:47:23:14:9:29 0/1:43:11:5:6:31:35.48%:37:1.6659E-4:44:20:9:11:31 0/1:43:7:4:3:26:26.92%:23:4.9169E-3:47:19:13:6:26 0/0:38:6:5:1:28:21.43%:16:1.1603E-2:46:22:10:12:28 0/1:42:8:3:5:34:23.53%:26:2.4562E-3:45:26:13:13:35 0/0:42:4:3:1:27:14.81%:23:5.5494E-2:45:23:14:9:27 0/0:43:4:2:2:28:14.29%:23:5.5746E-2:47:24:11:13:28 0/1:47:7:4:3:27:25.93%:22:5.0143E-3:44:20:11:9:28 0/1:50:7:5:2:33:21.21%:22:5.4855E-3:48:26:19:7:34 0/0:41:5:2:3:32:15.62%:24:2.6412E-2:44:27:15:12:32 0/0:48:6:2:4:41:14.63%:33:1.2841E-2:44:35:23:12:42 0/1:45:11:6:5:54:20.37%:35:2.7747E-4:47:43:31:12:55 0/1:43:11:6:5:40:27.5%:36:2.2064E-4:48:29:22:7:40 0/1:39:9:6:3:40:22.5%:29:1.1791E-3:49:31:22:9:41 0/1:40:9:4:5:32:28.12%:29:1.0185E-3:44:23:15:8:33 0/1:40:8:5:3:38:21.05%:25:2.5935E-3:47:30:18:12:38 0/0:50:5:4:1:28:17.86%:19:2.5729E-2:45:23:15:8:28 0/0:49:4:1:3:26:15.38%:20:5.5222E-2:43:22:12:10:26 0/0:43:4:2:2:30:13.33%:26:5.62E-2:41:26:13:13:30 0/1:37:9:6:3:41:21.95%:29:1.1955E-3:46:32:21:11:41 0/0:46:5:5:0:26:19.23%:17:2.531E-2:44:21:7:14:27 0/1:39:9:6:3:33:27.27%:29:1.042E-3:46:24:18:6:34 0/1:39:7:5:2:43:16.28%:22:5.9972E-3:43:36:18:18:44 0/1:49:12:6:6:31:38.71%:41:6.5329E-5:41:19:15:4:31 0/0:45:3:2:1:24:12.5%:22:1.1702E-1:45:21:16:5:25 0/1:40:10:4:6:42:23.81%:32:5.3293E-4:41:32:15:17:43 0/0:37:4:1:3:19:21.05%:13:5.251E-2:47:15:10:5:19 0/0:46:5:3:2:37:13.51%:32:2.706E-2:43:32:16:16:38 0/1:44:6:5:1:19:31.58%:20:9.828E-3:42:13:5:8:19 0/1:38:12:9:3:40:30%:40:9.2733E-5:44:28:14:14:40 0/1:40:7:6:1:33:21.21%:22:5.4855E-3:43:26:13:13:35 0/0:43:5:5:0:22:22.73%:12:2.4248E-2:41:17:9:8:23 0/1:45:11:7:4:38:28.95%:36:2.1011E-4:46:27:9:18:38 0/0:49:2:2:0:28:7.14%:34:2.4528E-1:43:25:17:8:28 0/1:48:8:4:4:23:34.78%:27:1.8791E-3:47:15:10:5:23 0/1:44:10:7:3:33:30.3%:33:4.3872E-4:42:23:17:6:33 0/1:47:11:9:2:32:34.38%:37:1.7351E-4:48:21:12:9:32 0/0:37:5:4:1:23:21.74%:14:2.4548E-2:45:18:12:6:23 0/0:44:5:2:3:32:15.62%:24:2.6412E-2:44:27:12:15:33 0/1:40:14:12:2:43:32.56%:47:1.727E-5:47:29:20:9:43 0/0:41:4:2:2:37:10.81%:38:5.7399E-2:45:33:22:11:38 0/0:45:3:3:0:28:10.71%:28:1.1818E-1:44:25:17:8:28 0/0:60:1:1:0:12:8.33%:14:5E-1:40:11:7:4:12 0/1:48:8:3:5:35:22.86%:26:2.4931E-3:52:27:14:13:36 0/0:46:5:3:2:30:16.67%:21:2.6093E-2:47:25:16:9:31 0/1:51:8:6:2:25:32%:26:2.0146E-3:46:17:9:8:25 0/0:37:5:2:3:16:31.25%:6:2.1691E-2:52:11:7:4:16 0/0:45:4:2:2:27:14.81%:23:5.5494E-2:48:23:13:10:27 0/1:39:9:5:4:42:21.43%:29:1.2112E-3:43:33:18:15:42 0/0:46:5:1:4:32:15.62%:24:2.6412E-2:47:27:12:15:33 0/0:46:5:2:3:22:22.73%:12:2.4248E-2:39:17:9:8:22 0/0:44:6:4:2:24:25%:11:1.0968E-2:52:18:10:8:24 0/0:46:5:2:3:30:16.67%:21:2.6093E-2:42:25:12:13:30 0/1:43:7:5:2:25:28%:23:4.8126E-3:45:18:7:11:25 0/1:37:13:9:4:35:37.14%:45:3.1103E-5:44:22:9:13:36 0/1:44:13:7:6:50:26%:43:4.9906E-5:42:37:17:20:51 0/0:42:5:4:1:23:21.74%:14:2.4548E-2:47:18:11:7:23 0/0:36:2:2:0:22:9.09%:24:2.4419E-1:47:20:12:8:22 0/0:45:5:4:1:24:20.83%:14:2.4823E-2:50:19:14:5:24 0/0:38:4:4:0:27:14.81%:23:5.5494E-2:42:23:15:8:27 0/1:41:11:9:2:34:32.35%:37:1.8662E-4:44:23:12:11:34 0/0:45:6:3:3:22:27.27%:9:1.057E-2:48:16:9:7:22 0/1:47:9:3:6:20:45%:32:6.1425E-4:53:11:6:5:20 0/0:44:3:2:1:19:15.79%:17:1.1486E-1:49:16:12:4:19 0/0:41:5:3:2:26:19.23%:17:2.531E-2:47:21:13:8:26 0/0:52:6:4:2:20:30%:7:1.0098E-2:49:14:7:7:20 0/1:38:9:7:2:37:24.32%:29:1.1256E-3:41:28:16:12:37 0/1:45:8:5:3:24:33.33%:27:1.949E-3:44:16:11:5:24 0/1:38:9:5:4:35:25.71%:29:1.0857E-3:43:26:15:11:35 0/1:39:10:7:3:42:23.81%:32:5.3293E-4:47:32:15:17:42 0/1:45:8:6:2:29:27.59%:26:2.2392E-3:43:21:13:8:30 0/1:43:9:7:2:33:27.27%:29:1.042E-3:41:24:13:11:33 0/0:39:5:3:2:32:15.62%:24:2.6412E-2:43:27:12:15:33 0/1:43:8:4:4:30:26.67%:26:2.2875E-3:42:22:7:15:31 0/0:43:6:3:3:22:27.27%:9:1.057E-2:46:16:12:4:22 0/1:41:7:6:1:38:18.42%:22:5.7727E-3:40:31:19:12:38 0/0:36:5:1:4:22:22.73%:12:2.4248E-2:37:17:12:5:22 0/1:43:13:5:8:32:40.62%:45:2.6443E-5:45:19:11:8:32 0/0:50:5:3:2:15:33.33%:6:2.1073E-2:46:10:5:5:15 0/0:51:6:3:3:31:19.35%:20:1.1977E-2:44:25:20:5:31 0/0:46:5:3:2:29:17.24%:22:2.5917E-2:46:24:16:8:30 0/0:44:6:4:2:30:20%:18:1.186E-2:46:24:13:11:31 0/1:38:7:3:4:35:20%:22:5.6095E-3:50:28:19:9:36 0/1:41:14:8:6:36:38.89%:48:1.2704E-5:43:22:16:6:37 0/0:44:6:3:3:24:25%:11:1.0968E-2:42:18:9:9:24 0/1:46:10:2:8:30:33.33%:33:3.9851E-4:44:20:8:12:30 0/0:45:6:3:3:24:25%:11:1.0968E-2:43:18:11:7:24 0/1:37:11:9:2:40:27.5%:36:2.2064E-4:46:29:14:15:40 0/1:44:12:7:5:45:26.67%:39:1.05E-4:42:33:17:16:46 0/1:36:10:8:2:39:25.64%:32:5.0524E-4:43:29:16:13:40 0/1:38:12:8:4:40:30%:40:9.2733E-5:43:28:12:16:40 0/0:50:5:4:1:28:17.86%:19:2.5729E-2:40:23:11:12:28 0/0:40:4:2:2:22:18.18%:15:5.3885E-2:41:18:9:9:23 0/1:37:13:8:5:60:21.67%:42:5.8991E-5:43:47:28:19:60 0/1:43:12:9:3:44:27.27%:39:1.027E-4:47:32:19:13:44 0/1:38:7:5:2:32:21.88%:22:5.4182E-3:45:25:20:5:32 0/1:43:10:7:3:33:30.3%:33:4.3872E-4:41:23:10:13:34 0/1:41:15:9:6:41:36.59%:51:6.364E-6:40:26:21:5:46 0/1:40:10:4:6:40:25%:32:5.1483E-4:39:30:17:13:41 0/1:38:12:7:5:24:50%:44:3.8815E-5:39:12:5:7:25 0/1:35:11:4:7:45:24.44%:36:2.4398E-4:38:34:20:14:48 0/1:39:8:4:4:34:23.53%:26:2.4562E-3:45:26:20:6:34 0/1:51:8:4:4:35:22.86%:26:2.4931E-3:43:27:21:6:35 0/0:37:6:4:2:44:13.64%:36:1.3026E-2:42:38:20:18:47 0/1:35:10:8:2:28:35.71%:34:3.6855E-4:40:18:6:12:30 0/1:35:10:5:5:38:26.32%:33:4.9525E-4:38:28:17:11:39 0/1:38:9:3:6:33:27.27%:29:1.042E-3:43:24:16:8:34 0/1:38:7:4:3:25:28%:23:4.8126E-3:41:18:10:8:25 0/1:44:11:4:7:32:34.38%:37:1.7351E-4:42:21:12:9:33 0/1:37:7:4:3:25:28%:23:4.8126E-3:39:18:11:7:27 0/1:35:9:6:3:60:15%:28:1.4138E-3:41:51:22:29:61 0/1:48:10:5:5:32:31.25%:33:4.259E-4:43:22:10:12:32 0/1:40:8:6:2:33:24.24%:26:2.4173E-3:42:25:11:14:33 0/1:39:11:5:6:49:22.45%:35:2.6004E-4:43:38:22:16:49 0/1:35:7:5:2:45:15.56%:22:6.0738E-3:43:38:23:15:45 0/1:40:7:3:4:30:23.33%:22:5.2713E-3:42:23:13:10:31 0/0:36:6:2:4:27:22.22%:16:1.1461E-2:41:21:12:9:27 0/1:42:9:3:6:34:26.47%:29:1.0644E-3:45:25:15:10:36 0/1:45:10:7:3:34:29.41%:33:4.51E-4:45:24:17:7:34 0/0:49:4:3:1:24:16.67%:18:5.461E-2:47:20:10:10:24 0/1:43:8:2:6:40:20%:25:2.653E-3:43:32:16:16:40 0/1:40:8:6:2:34:23.53%:26:2.4562E-3:39:26:16:10:38 0/1:43:10:6:4:47:21.28%:32:5.7272E-4:43:37:24:13:47 0/1:41:10:4:6:38:26.32%:33:4.9525E-4:42:28:17:11:39 MTB_anc 2866882 . G A . PASS AC=90;AF=0.300;AN=300;ANN=A|missense_variant|MODERATE|lppA_Rv2543|gene2603|transcript|Transcript_gene2603|Coding|1/1|c.415G>A|p.Ala139Thr|415/660|415/660|139/219||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2866882G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2866882G>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:17:10:7:55:30.91%:57:1.768E-6:43:38:23:15:55 0/0:44:4:3:1:17:23.53%:11:5.132E-2:49:13:8:5:18 0/1:50:14:8:6:43:32.56%:47:1.727E-5:48:29:19:10:43 0/1:44:7:3:4:39:17.95%:22:5.8219E-3:49:32:19:13:39 0/0:48:4:3:1:29:13.79%:26:5.5981E-2:40:25:13:12:29 0/1:40:9:5:4:31:29.03%:30:9.9376E-4:45:22:11:11:31 0/0:39:6:3:3:33:18.18%:23:1.219E-2:47:27:16:11:33 0/0:47:5:5:0:23:21.74%:14:2.4548E-2:43:18:13:5:23 0/1:53:7:3:4:35:20%:22:5.6095E-3:46:28:16:12:35 0/1:49:6:3:3:19:31.58%:20:9.828E-3:47:13:8:5:19 0/1:48:8:7:1:26:30.77%:26:2.076E-3:51:18:10:8:27 0/1:37:9:5:4:41:21.95%:29:1.1955E-3:43:32:22:10:42 0/1:48:10:8:2:26:38.46%:34:3.3576E-4:48:16:6:10:27 0/1:42:11:8:3:48:22.92%:35:2.5621E-4:48:37:20:17:48 0/0:44:6:2:4:28:21.43%:16:1.1603E-2:43:22:15:7:29 0/0:49:2:1:1:34:5.88%:43:2.4627E-1:43:32:18:14:35 0/0:45:3:1:2:26:11.54%:25:1.1765E-1:47:23:13:10:27 0/0:38:1:1:0:14:7.14%:17:5E-1:42:13:6:7:14 0/1:47:7:6:1:26:26.92%:23:4.9169E-3:49:19:11:8:27 0/0:38:1:1:0:21:4.76%:31:5E-1:46:20:11:9:23 0/0:53:3:3:0:19:15.79%:17:1.1486E-1:44:16:6:10:19 0/1:42:15:9:6:59:25.42%:49:1.1029E-5:45:44:29:15:60 0/0:55:5:2:3:17:29.41%:8:2.2239E-2:45:12:6:6:17 0/1:45:9:6:3:28:32.14%:30:9.1169E-4:49:19:11:8:28 0/1:47:7:6:1:37:18.92%:22:5.721E-3:41:30:15:15:37 0/0:52:3:1:2:29:10.34%:31:1.1842E-1:46:26:12:14:29 0/0:45:6:5:1:29:20.69%:18:1.1736E-2:47:23:14:9:29 0/1:43:12:6:6:32:37.5%:41:6.8751E-5:45:20:9:11:32 0/1:44:7:4:3:25:28%:23:4.8126E-3:48:18:13:5:25 0/0:41:6:5:1:28:21.43%:16:1.1603E-2:46:22:10:12:28 0/1:44:7:3:4:33:21.21%:22:5.4855E-3:45:26:13:13:35 0/0:43:4:3:1:26:15.38%:20:5.5222E-2:45:22:13:9:27 0/0:49:2:2:0:26:7.69%:30:2.451E-1:47:24:11:13:28 0/1:46:7:4:3:24:29.17%:23:4.7006E-3:43:17:10:7:27 0/1:48:8:5:3:35:22.86%:26:2.4931E-3:48:27:19:8:35 0/0:40:6:3:3:32:18.75%:20:1.2087E-2:44:26:14:12:32 0/1:49:7:2:5:42:16.67%:22:5.9563E-3:43:35:23:12:42 0/1:46:11:6:5:54:20.37%:35:2.7747E-4:47:43:30:13:55 0/1:45:10:6:4:40:25%:32:5.1483E-4:48:30:22:8:41 0/1:40:9:6:3:40:22.5%:29:1.1791E-3:50:31:22:9:41 0/1:39:11:5:6:34:32.35%:37:1.8662E-4:45:23:15:8:34 0/1:40:9:6:3:39:23.08%:29:1.162E-3:47:30:18:12:39 0/0:51:5:4:1:28:17.86%:19:2.5729E-2:45:23:15:8:28 0/0:49:4:1:3:25:16%:21:5.4928E-2:42:21:12:9:26 0/0:47:5:2:3:31:16.13%:24:2.6257E-2:41:26:13:13:31 0/1:38:9:6:3:41:21.95%:29:1.1955E-3:47:32:21:11:41 0/0:48:6:5:1:27:22.22%:16:1.1461E-2:44:21:7:14:28 0/1:40:10:6:4:35:28.57%:33:4.6276E-4:45:25:19:6:36 0/1:41:7:5:2:44:15.91%:22:6.0363E-3:42:37:19:18:44 0/1:50:12:6:6:32:37.5%:41:6.8751E-5:44:20:16:4:33 0/0:43:4:2:2:24:16.67%:18:5.461E-2:47:20:15:5:24 0/1:41:10:4:6:42:23.81%:32:5.3293E-4:40:32:16:16:44 0/0:37:4:1:3:19:21.05%:13:5.251E-2:47:15:10:5:19 0/0:49:6:4:2:36:16.67%:25:1.2467E-2:44:30:15:15:38 0/1:43:7:6:1:21:33.33%:23:4.3101E-3:42:14:6:8:21 0/1:40:11:9:2:39:28.21%:36:2.1547E-4:44:28:14:14:40 0/1:39:9:6:3:33:27.27%:29:1.042E-3:44:24:13:11:35 0/0:44:5:5:0:23:21.74%:14:2.4548E-2:41:18:10:8:24 0/1:45:11:7:4:38:28.95%:36:2.1011E-4:46:27:9:18:38 0/0:49:2:2:0:29:6.9%:37:2.4561E-1:44:27:17:10:29 0/1:49:8:4:4:23:34.78%:27:1.8791E-3:47:15:10:5:24 0/1:46:10:7:3:34:29.41%:33:4.51E-4:41:24:18:6:34 0/1:47:11:9:2:31:35.48%:37:1.6659E-4:49:20:11:9:31 0/0:41:5:4:1:23:21.74%:14:2.4548E-2:44:18:12:6:23 0/0:46:5:2:3:32:15.62%:24:2.6412E-2:42:27:13:14:32 0/1:41:14:12:2:43:32.56%:47:1.727E-5:48:29:20:9:43 0/0:39:4:2:2:38:10.53%:37:5.7534E-2:45:34:23:11:39 0/0:46:3:3:0:27:11.11%:28:1.1792E-1:43:24:17:7:28 0/0:60:1:1:0:12:8.33%:14:5E-1:39:11:7:4:12 0/1:49:8:3:5:35:22.86%:26:2.4931E-3:52:27:13:14:37 0/0:43:6:3:3:30:20%:18:1.186E-2:46:24:16:8:31 0/1:51:8:6:2:25:32%:26:2.0146E-3:46:17:9:8:25 0/1:41:6:3:3:17:35.29%:20:9.2021E-3:52:11:7:4:17 0/0:52:3:2:1:26:11.54%:25:1.1765E-1:49:23:13:10:27 0/1:38:8:5:3:42:19.05%:25:2.7074E-3:42:34:19:15:43 0/0:46:5:1:4:33:15.15%:27:2.6557E-2:46:28:12:16:33 0/0:45:5:2:3:22:22.73%:12:2.4248E-2:41:17:9:8:22 0/0:45:6:4:2:24:25%:11:1.0968E-2:52:18:10:8:24 0/0:47:5:2:3:29:17.24%:22:2.5917E-2:44:24:11:13:29 0/1:43:7:5:2:24:29.17%:23:4.7006E-3:46:17:6:11:25 0/1:38:13:9:4:34:38.24%:45:2.9583E-5:46:21:9:12:36 0/1:45:13:7:6:50:26%:43:4.9906E-5:42:37:17:20:51 0/0:42:5:4:1:23:21.74%:14:2.4548E-2:46:18:11:7:23 0/0:38:1:1:0:22:4.55%:31:5E-1:47:21:13:8:23 0/0:46:5:4:1:24:20.83%:14:2.4823E-2:48:19:14:5:24 0/0:36:4:4:0:25:16%:21:5.4928E-2:43:21:15:6:25 0/1:41:11:9:2:33:33.33%:37:1.8019E-4:45:22:12:10:33 0/0:49:6:3:3:21:28.57%:9:1.0344E-2:49:15:8:7:21 0/1:47:9:3:6:21:42.86%:31:6.592E-4:49:12:7:5:21 0/0:39:4:3:1:20:20%:13:5.3015E-2:50:16:12:4:20 0/0:42:5:3:2:26:19.23%:17:2.531E-2:47:21:13:8:26 0/0:53:6:4:2:20:30%:7:1.0098E-2:49:14:7:7:20 0/1:41:8:7:1:36:22.22%:25:2.5282E-3:41:28:16:12:37 0/1:45:8:6:2:24:33.33%:27:1.949E-3:43:16:11:5:25 0/1:39:9:6:3:35:25.71%:29:1.0857E-3:43:26:15:11:36 0/1:40:10:7:3:42:23.81%:32:5.3293E-4:49:32:15:17:42 0/1:45:8:6:2:29:27.59%:26:2.2392E-3:43:21:12:9:30 0/1:45:9:7:2:31:29.03%:30:9.9376E-4:44:22:12:10:31 0/0:41:5:3:2:32:15.62%:24:2.6412E-2:43:27:12:15:33 0/1:43:8:4:4:30:26.67%:26:2.2875E-3:43:22:7:15:30 0/0:45:6:3:3:21:28.57%:9:1.0344E-2:47:15:11:4:21 0/1:41:7:6:1:39:17.95%:22:5.8219E-3:40:32:19:13:39 0/0:37:5:1:4:23:21.74%:14:2.4548E-2:36:18:13:5:23 0/1:43:13:5:8:32:40.62%:45:2.6443E-5:45:19:11:8:32 0/0:54:4:3:1:15:26.67%:8:4.9808E-2:44:11:5:6:16 0/0:52:6:3:3:30:20%:18:1.186E-2:44:24:20:4:30 0/1:42:7:3:4:32:21.88%:22:5.3469E-3:46:24:16:8:32 0/0:45:6:4:2:31:19.35%:20:1.1977E-2:46:25:13:12:31 0/1:36:8:3:5:35:22.86%:26:2.4931E-3:48:27:19:8:35 0/1:43:15:8:7:38:39.47%:52:5.4463E-6:42:23:17:6:38 0/0:45:6:3:3:24:25%:11:1.0968E-2:41:18:9:9:24 0/1:45:10:2:8:30:33.33%:33:3.9851E-4:44:20:9:11:31 0/0:44:6:3:3:23:26.09%:11:1.0777E-2:44:17:11:6:24 0/1:37:11:9:2:40:27.5%:36:2.2064E-4:45:29:14:15:41 0/1:44:12:7:5:47:25.53%:39:1.0942E-4:41:35:18:17:47 0/1:37:10:9:1:40:25%:32:5.1483E-4:44:30:16:14:41 0/1:39:12:8:4:40:30%:40:9.2733E-5:44:28:12:16:40 0/0:49:5:4:1:28:17.86%:19:2.5729E-2:41:23:11:12:28 0/0:45:3:2:1:22:13.64%:19:1.1628E-1:41:19:10:9:23 0/1:38:13:8:5:59:22.03%:42:5.818E-5:43:46:28:18:60 0/1:43:12:9:3:44:27.27%:39:1.027E-4:47:32:19:13:44 0/1:38:7:5:2:32:21.88%:22:5.3469E-3:45:24:19:5:33 0/1:43:10:7:3:30:33.33%:33:3.9851E-4:43:20:8:12:32 0/1:41:15:9:6:45:33.33%:51:7.5306E-6:37:30:22:8:46 0/1:44:10:4:6:39:25.64%:32:5.0524E-4:39:29:17:12:40 0/1:38:13:7:6:24:54.17%:48:1.2938E-5:39:11:4:7:25 0/1:35:11:4:7:45:24.44%:36:2.4398E-4:38:34:19:15:49 0/1:39:8:4:4:35:22.86%:26:2.4931E-3:44:27:20:7:35 0/1:51:8:4:4:33:24.24%:26:2.4173E-3:43:25:20:5:35 0/0:37:6:4:2:43:13.95%:36:1.2967E-2:42:37:19:18:47 0/1:37:9:8:1:29:31.03%:30:9.4048E-4:41:20:7:13:30 0/1:36:10:5:5:38:26.32%:33:4.9525E-4:38:28:16:12:40 0/1:34:9:3:6:33:27.27%:29:1.042E-3:45:24:16:8:34 0/0:40:6:4:2:23:26.09%:11:1.0777E-2:42:17:10:7:26 0/1:45:11:4:7:32:34.38%:37:1.7351E-4:41:21:13:8:33 0/1:37:8:4:4:26:30.77%:26:2.076E-3:39:18:11:7:27 0/1:37:9:6:3:58:15.52%:28:1.3968E-3:42:49:20:29:60 0/1:47:11:5:6:31:35.48%:37:1.6659E-4:44:20:8:12:31 0/1:40:8:6:2:33:24.24%:26:2.4173E-3:42:25:11:14:33 0/1:39:11:5:6:51:21.57%:35:2.6733E-4:43:40:23:17:51 0/0:38:5:4:1:42:11.9%:38:2.7555E-2:42:37:23:14:44 0/1:38:8:3:5:32:25%:26:2.3332E-3:41:23:13:10:32 0/0:37:6:2:4:27:22.22%:16:1.1461E-2:42:21:12:9:27 0/1:42:9:3:6:35:25.71%:29:1.0857E-3:45:26:15:11:36 0/1:45:10:7:3:35:28.57%:33:4.6276E-4:44:25:17:8:35 0/0:46:5:4:1:25:20%:17:2.5076E-2:47:20:10:10:25 0/1:43:8:2:6:40:20%:25:2.653E-3:43:32:16:16:41 0/1:40:9:7:2:37:24.32%:29:1.1256E-3:39:28:18:10:37 0/1:43:10:6:4:46:21.74%:32:5.6532E-4:43:36:23:13:46 0/1:41:11:5:6:37:29.73%:36:2.0455E-4:43:26:17:9:38 MTB_anc 2867207 . C G . PASS AC=149;AF=0.497;AN=300;ANN=G|synonymous_variant|LOW|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.84C>G|p.Ala28Ala|84/663|84/663|28/220||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867207C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867207C>G||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:48:14:7:7:60:23.33%:45:2.5912E-5:45:46:26:20:63 0/1:57:11:5:6:29:37.93%:38:1.5195E-4:44:18:7:11:29 0/1:51:38:22:16:88:43.18%:99:2.1318E-14:45:50:28:22:89 0/1:46:19:7:12:46:41.3%:67:1.8161E-7:46:27:18:9:46 0/1:50:20:9:11:48:41.67%:71:7.7415E-8:45:28:15:13:48 0/1:47:17:11:6:38:44.74%:61:7.5297E-7:42:21:11:10:38 0/1:53:17:9:8:41:41.46%:60:9.3546E-7:48:24:10:14:41 0/1:38:10:7:3:39:25.64%:32:5.0524E-4:47:29:11:18:39 0/1:49:23:10:13:60:38.33%:80:8.6933E-9:48:37:20:17:61 0/0:48:6:3:3:32:18.75%:20:1.2087E-2:46:26:10:16:32 0/1:50:19:9:10:46:41.3%:67:1.8161E-7:49:27:15:12:46 0/1:49:31:17:14:65:47.69%:99:4.0316E-12:44:34:18:16:66 0/1:49:17:7:10:59:28.81%:57:1.9861E-6:50:42:23:19:60 0/1:51:22:12:10:72:30.56%:74:3.5822E-8:45:50:29:21:73 0/1:52:12:4:8:31:38.71%:41:6.5329E-5:42:19:6:13:31 0/1:51:22:9:13:53:41.51%:78:1.5031E-8:46:31:17:14:54 0/1:44:22:11:11:38:57.89%:85:3.0605E-9:44:16:8:8:40 0/1:49:18:8:10:43:41.86%:63:3.9871E-7:46:25:11:14:43 0/1:46:11:7:4:30:36.67%:37:1.594E-4:46:19:15:4:31 0/1:54:13:5:8:40:32.5%:44:3.8184E-5:50:27:15:12:40 0/1:40:16:10:6:44:36.36%:55:2.8784E-6:48:28:14:14:44 0/1:46:25:15:10:70:35.71%:86:2.0762E-9:44:44:22:22:72 0/1:46:22:13:9:45:48.89%:81:7.724E-9:53:23:11:12:47 0/1:45:17:5:12:54:31.48%:57:1.7118E-6:43:37:20:17:55 0/1:46:24:11:13:46:52.17%:90:9.761E-10:41:22:10:12:46 0/1:47:14:9:5:37:37.84%:48:1.3393E-5:49:23:9:14:38 0/1:47:18:8:10:36:50%:67:1.9562E-7:46:17:11:6:36 0/1:47:15:8:7:45:33.33%:51:7.5306E-6:50:30:15:15:45 0/1:47:21:11:10:45:46.67%:76:2.2206E-8:39:24:15:9:45 0/1:47:17:7:10:50:34%:58:1.4808E-6:41:33:18:15:50 0/1:49:15:7:8:43:34.88%:51:6.9561E-6:44:28:16:12:43 0/1:51:16:5:11:48:33.33%:54:3.4048E-6:44:32:18:14:48 0/1:51:15:8:7:44:34.09%:51:7.2456E-6:46:29:17:12:44 0/1:47:16:5:11:37:43.24%:57:1.9143E-6:43:21:13:8:37 0/1:48:26:17:9:56:46.43%:94:3.2889E-10:45:30:17:13:57 0/1:45:16:9:7:55:29.09%:53:4.2614E-6:46:39:17:22:55 0/1:50:21:12:9:60:35%:72:5.4448E-8:44:38:21:17:60 0/1:53:32:19:13:87:36.78%:99:6.9639E-12:47:55:25:30:87 0/1:51:24:11:13:65:36.92%:83:4.3702E-9:48:41:21:20:65 0/1:47:26:14:12:62:41.94%:92:5.295E-10:45:36:20:16:63 0/1:50:16:8:8:42:38.1%:55:2.607E-6:46:26:12:14:43 0/1:47:27:15:12:74:36.49%:93:4.0499E-10:43:47:19:28:74 0/1:47:19:6:13:44:43.18%:68:1.5811E-7:47:25:13:12:45 0/1:50:18:8:10:35:51.43%:67:1.9562E-7:47:17:6:11:35 0/1:40:12:9:3:42:28.57%:40:9.7866E-5:44:30:21:9:42 0/1:47:22:15:7:57:38.6%:77:1.9179E-8:42:35:18:17:57 0/1:45:18:7:11:41:43.9%:64:3.454E-7:48:23:14:9:41 0/1:47:17:11:6:51:33.33%:58:1.5394E-6:48:34:20:14:51 0/1:46:29:15:14:51:56.86%:99:6.4161E-12:43:22:12:10:51 0/1:48:17:10:7:51:33.33%:58:1.5394E-6:49:34:13:21:52 0/1:51:10:7:3:32:31.25%:33:4.259E-4:51:22:11:11:32 0/1:45:18:7:11:53:33.96%:61:6.6943E-7:46:35:16:19:53 0/1:51:14:10:4:39:35.9%:48:1.4735E-5:53:25:10:15:40 0/1:44:14:7:7:46:30.43%:47:1.9039E-5:48:32:18:14:47 0/1:47:11:5:6:35:31.43%:37:1.8662E-4:41:23:12:11:35 0/1:44:20:12:8:59:33.9%:68:1.3682E-7:45:39:18:21:60 0/1:45:23:15:8:49:46.94%:84:3.9694E-9:43:26:11:15:51 0/1:49:7:2:5:40:17.5%:22:5.8688E-3:45:33:19:14:42 0/1:45:24:14:10:54:44.44%:86:2.1774E-9:42:30:13:17:54 0/1:51:30:15:15:75:40%:99:2.4283E-11:49:45:22:23:75 0/1:48:17:9:8:42:40.48%:60:9.9678E-7:44:25:13:12:42 0/1:51:24:15:9:54:44.44%:86:2.1774E-9:43:30:10:20:54 0/1:43:28:18:10:64:43.75%:99:8.2552E-11:44:36:20:16:64 0/1:52:17:5:12:39:43.59%:60:8.1342E-7:47:22:7:15:40 0/1:47:20:12:8:62:32.26%:68:1.5316E-7:47:42:25:17:64 0/1:45:42:22:20:95:44.21%:99:6.3812E-16:46:53:34:19:96 0/1:48:13:4:9:26:50%:47:1.6379E-5:44:13:7:6:27 0/1:52:26:16:10:58:44.83%:94:3.9115E-10:45:32:19:13:58 0/1:48:8:4:4:23:34.78%:27:1.8791E-3:50:15:13:2:23 0/1:50:14:6:8:37:37.84%:48:1.3393E-5:45:23:9:14:37 0/1:53:19:9:10:45:42.22%:67:1.6979E-7:48:26:15:11:46 0/1:48:16:6:10:50:32%:54:3.6584E-6:49:34:17:17:50 0/1:55:6:3:3:19:31.58%:20:9.828E-3:47:13:8:5:19 0/1:54:15:7:8:45:33.33%:51:7.5306E-6:49:30:19:11:45 0/1:45:26:15:11:57:45.61%:94:3.594E-10:41:31:21:10:57 0/1:45:20:11:9:42:47.62%:73:4.7857E-8:46:22:11:11:42 0/1:50:17:6:11:39:43.59%:60:8.1342E-7:44:22:10:12:39 0/1:44:16:7:9:47:34.04%:54:3.2755E-6:50:31:20:11:49 0/1:47:27:13:14:48:56.25%:99:4.1928E-11:45:21:14:7:49 0/1:45:13:4:9:35:37.14%:45:3.1103E-5:39:22:11:11:35 0/1:42:15:6:9:31:48.39%:54:3.2298E-6:42:16:9:7:31 0/1:44:30:17:13:81:37.04%:99:3.3987E-11:41:51:20:31:82 0/1:46:21:13:8:54:38.89%:73:4.2301E-8:47:33:16:17:55 0/1:49:22:11:11:39:56.41%:84:3.6006E-9:44:17:10:7:40 0/1:47:11:7:4:34:32.35%:37:1.8662E-4:48:23:10:13:34 0/1:48:10:5:5:36:27.78%:33:4.7404E-4:41:26:15:11:36 0/1:45:24:11:13:51:47.06%:87:1.6778E-9:46:27:15:12:52 0/1:46:15:8:7:40:37.5%:52:6.0618E-6:50:25:16:9:40 0/1:50:13:3:10:36:36.11%:44:3.2589E-5:48:23:4:19:37 0/1:45:14:7:7:34:41.18%:49:1.1295E-5:49:20:10:10:34 0/1:51:21:16:5:50:42%:74:3.2974E-8:47:29:15:14:50 0/1:50:17:7:10:36:47.22%:61:6.3405E-7:49:19:9:10:36 0/1:45:22:13:9:55:40%:77:1.7076E-8:40:33:17:16:56 0/1:45:21:12:9:58:36.21%:72:5.1992E-8:42:37:21:16:58 0/1:45:22:11:11:64:34.38%:75:2.6845E-8:45:42:24:18:66 0/1:46:27:19:8:42:64.29%:99:1.3138E-11:43:15:8:7:42 0/1:45:19:12:7:49:38.78%:66:2.1763E-7:44:30:18:12:49 0/1:48:17:10:7:42:40.48%:60:9.9678E-7:44:25:14:11:43 0/1:44:18:9:9:41:43.9%:64:3.454E-7:49:23:11:12:43 0/1:43:17:12:5:47:36.17%:58:1.3018E-6:46:30:19:11:48 0/1:49:19:11:8:39:48.72%:69:1.0268E-7:46:20:8:12:39 0/1:42:20:8:12:50:40%:70:8.2643E-8:44:29:14:15:50 0/1:43:24:11:13:58:41.38%:85:2.9186E-9:43:34:17:17:59 0/1:46:12:6:6:36:33.33%:40:8.1472E-5:42:24:12:12:37 0/1:52:13:7:6:43:30.23%:43:4.2025E-5:45:30:15:15:43 0/1:52:13:4:9:42:30.95%:43:4.0777E-5:44:29:18:11:42 0/1:49:17:9:8:42:40.48%:60:9.9678E-7:50:25:13:12:43 0/1:46:26:17:9:55:47.27%:95:2.9965E-10:46:29:18:11:55 0/1:47:19:16:3:61:31.15%:64:3.6228E-7:43:42:21:21:62 0/1:44:22:10:12:51:43.14%:78:1.3059E-8:43:29:15:14:51 0/1:47:29:18:11:55:52.73%:99:1.1491E-11:45:26:13:13:55 0/1:40:24:15:9:56:42.86%:85:2.5383E-9:43:32:20:12:58 0/1:40:27:16:11:53:50.94%:99:8.2728E-11:40:26:15:11:53 0/1:50:19:11:8:49:38.78%:66:2.0555E-7:42:29:18:11:49 0/1:44:18:8:10:54:33.33%:61:6.9602E-7:42:36:23:13:57 0/1:46:17:10:7:46:36.96%:59:1.2413E-6:44:29:15:14:50 0/1:44:18:12:6:35:51.43%:67:1.9562E-7:38:17:9:8:38 0/1:54:21:7:14:57:36.84%:73:4.9547E-8:48:36:18:18:58 0/1:46:20:11:9:40:50%:74:3.8991E-8:41:20:11:9:41 0/1:46:31:14:17:70:44.29%:99:6.2985E-12:45:39:22:17:70 0/1:50:22:13:9:77:28.57%:73:4.1385E-8:43:55:26:29:77 0/1:47:21:12:9:45:46.67%:76:2.2206E-8:42:24:6:18:45 0/1:48:20:14:6:40:50%:74:3.8991E-8:43:20:12:8:41 0/1:40:27:12:15:63:42.86%:96:2.0968E-10:42:36:21:15:67 0/1:44:16:6:10:55:29.09%:53:4.2614E-6:41:39:24:15:55 0/1:47:25:14:11:55:45.45%:90:8.49E-10:42:30:20:10:58 0/1:39:22:12:10:57:38.6%:77:1.9179E-8:38:35:18:17:60 0/1:49:20:10:10:59:33.9%:68:1.3682E-7:41:39:21:18:63 0/1:38:14:11:3:46:30.43%:47:1.9039E-5:42:32:16:16:48 0/1:46:24:12:12:54:44.44%:86:2.1774E-9:41:30:14:16:55 0/1:42:23:12:11:65:35.38%:79:1.1134E-8:40:42:18:24:66 0/1:46:33:17:16:62:53.23%:99:3.195E-13:41:29:13:16:62 0/1:44:20:11:9:53:37.74%:69:1.0405E-7:41:33:23:10:55 0/1:44:23:9:14:60:38.33%:80:8.6933E-9:43:37:21:16:61 0/1:44:13:1:12:44:29.55%:43:4.324E-5:40:31:20:11:45 0/1:50:20:11:9:51:39.22%:70:9.3266E-8:46:31:19:12:51 0/1:41:37:22:15:85:43.53%:99:4.2977E-14:40:47:29:18:87 0/1:47:26:14:12:64:40.62%:92:6.0487E-10:47:38:21:17:65 0/1:42:25:14:11:53:47.17%:91:7.091E-10:42:28:21:7:54 0/1:46:20:8:12:48:41.67%:71:7.7415E-8:43:28:15:13:49 0/1:45:19:5:14:43:44.19%:68:1.4658E-7:42:24:13:11:44 0/1:51:15:6:9:37:40.54%:52:5.1339E-6:42:22:11:11:39 0/1:51:11:6:5:35:31.43%:37:1.9282E-4:43:24:14:10:35 0/1:51:22:12:10:61:36.07%:76:2.3517E-8:44:39:17:22:61 0/1:44:21:14:7:51:41.18%:74:3.5259E-8:41:30:16:14:51 0/1:42:15:4:11:27:55.56%:56:2.0087E-6:49:12:7:5:27 0/1:47:26:9:17:53:49.06%:96:2.4512E-10:45:27:16:11:54 0/1:50:25:14:11:62:40.32%:88:1.4168E-9:44:37:18:19:62 0/1:49:38:16:22:83:45.78%:99:1.4126E-14:41:45:20:25:83 0/1:44:18:9:9:58:31.03%:60:8.0038E-7:41:40:27:13:59 MTB_anc 2867230 . G A . PASS AC=142;AF=0.473;AN=300;ANN=A|missense_variant|MODERATE|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.107G>A|p.Gly36Asp|107/663|107/663|36/220||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867230G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867230G>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:52:9:4:5:59:15.25%:28:1.4054E-3:44:50:27:23:60 0/0:60:4:2:2:25:16%:21:5.4928E-2:47:21:10:11:25 0/1:51:32:17:15:76:42.11%:99:3.6183E-12:45:44:23:21:80 0/1:49:10:4:6:36:27.78%:33:4.7404E-4:45:26:18:8:36 0/1:51:13:6:7:40:32.5%:44:3.8184E-5:46:27:12:15:40 0/0:52:6:4:2:28:21.43%:16:1.1603E-2:43:22:10:12:29 0/1:52:10:4:6:35:28.57%:33:4.6276E-4:47:25:10:15:35 0/1:40:8:6:2:39:20.51%:25:2.624E-3:45:31:11:20:41 0/1:55:15:5:10:52:28.85%:50:9.3931E-6:49:37:19:18:56 0/0:45:6:3:3:34:17.65%:23:1.2287E-2:48:28:11:17:34 0/1:43:11:5:6:40:27.5%:36:2.1547E-4:48:28:15:13:40 0/1:52:23:12:11:58:39.66%:81:7.7551E-9:44:35:18:17:60 0/1:52:9:4:5:54:16.67%:28:1.3596E-3:50:45:25:20:54 0/1:50:18:10:8:67:26.87%:59:1.0208E-6:47:49:28:21:68 0/1:55:9:3:6:30:30%:30:9.678E-4:41:21:6:15:30 0/1:54:15:5:10:46:32.61%:51:7.8109E-6:47:31:16:15:49 0/1:42:18:10:8:33:54.55%:68:1.5143E-7:44:15:7:8:35 0/1:50:11:3:8:39:28.21%:36:2.1547E-4:46:28:13:15:39 0/1:50:9:5:4:26:34.62%:30:8.4928E-4:45:17:12:5:26 0/1:60:10:5:5:40:25%:32:5.1483E-4:48:30:16:14:40 0/1:41:11:6:5:39:28.21%:36:2.1547E-4:46:28:14:14:39 0/1:47:21:13:8:66:31.82%:71:7.1741E-8:44:45:22:23:68 0/1:51:11:7:4:34:32.35%:37:1.8662E-4:51:23:12:11:35 0/1:51:10:3:7:45:22.22%:32:5.5766E-4:44:35:19:16:46 0/1:46:13:8:5:32:40.62%:45:2.6443E-5:41:19:8:11:33 0/1:50:9:7:2:35:25.71%:29:1.0857E-3:50:26:10:16:35 0/1:47:13:5:8:31:41.94%:46:2.4825E-5:48:18:13:5:31 0/1:51:9:4:5:40:22.5%:29:1.1791E-3:50:31:16:15:40 0/1:48:17:9:8:36:47.22%:61:6.3405E-7:40:19:12:7:37 0/1:46:11:5:6:41:26.83%:36:2.2563E-4:42:30:18:12:41 0/1:49:10:3:7:33:30.3%:33:4.3872E-4:46:23:12:11:35 0/1:46:13:3:10:43:30.23%:43:4.2025E-5:47:30:17:13:44 0/1:53:10:7:3:40:25%:32:5.1483E-4:51:30:18:12:41 0/1:48:15:5:10:38:39.47%:52:5.4463E-6:42:23:15:8:40 0/1:51:20:13:7:51:39.22%:70:9.3266E-8:45:31:17:14:53 0/1:47:12:7:5:48:25%:39:1.1153E-4:46:36:14:22:50 0/1:51:13:7:6:56:23.21%:42:5.5625E-5:45:43:25:18:56 0/1:53:24:15:9:77:31.17%:81:7.1082E-9:47:53:27:26:79 0/1:52:19:8:11:62:30.65%:64:3.74E-7:47:43:22:21:63 0/1:47:16:7:9:53:30.19%:53:4.0256E-6:45:37:20:17:53 0/1:49:13:7:6:40:32.5%:44:3.8184E-5:47:27:13:14:40 0/1:52:15:9:6:61:24.59%:49:1.1457E-5:45:46:20:26:62 0/1:52:12:2:10:36:33.33%:40:8.1472E-5:46:24:12:12:36 0/1:47:16:8:8:33:48.48%:58:1.364E-6:47:17:8:9:33 0/1:44:7:6:1:40:17.5%:22:5.8688E-3:43:33:24:9:40 0/1:52:12:8:4:46:26.09%:39:1.0724E-4:43:34:17:17:46 0/1:47:11:5:6:35:31.43%:37:1.9282E-4:48:24:14:10:35 0/1:46:13:10:3:44:29.55%:43:4.324E-5:48:31:21:10:44 0/1:49:22:11:11:41:53.66%:83:4.8137E-9:46:19:11:8:42 0/1:49:11:6:5:44:25%:36:2.3962E-4:48:33:13:20:45 0/0:53:6:4:2:27:22.22%:16:1.1461E-2:49:21:10:11:27 0/1:46:11:4:7:45:24.44%:36:2.4398E-4:47:34:14:20:46 0/1:53:12:9:3:36:33.33%:40:8.1472E-5:51:24:11:13:37 0/1:44:10:5:5:46:21.74%:32:5.6532E-4:49:36:22:14:46 0/0:49:6:1:5:33:18.18%:23:1.219E-2:42:27:16:11:33 0/1:47:14:7:7:47:29.79%:47:1.9604E-5:44:33:15:18:47 0/1:47:18:12:6:47:38.3%:62:5.072E-7:41:29:13:16:49 0/0:49:6:2:4:42:14.29%:33:1.2905E-2:46:36:21:15:43 0/1:45:11:7:4:43:25.58%:36:2.3512E-4:44:32:16:16:43 0/1:52:20:10:10:66:30.3%:67:1.7467E-7:47:46:22:24:66 0/1:54:12:6:6:38:31.58%:40:8.7276E-5:44:26:15:11:38 0/1:50:19:10:9:50:38%:66:2.2975E-7:47:31:10:21:50 0/1:46:18:12:6:56:32.14%:61:7.4863E-7:46:38:22:16:56 0/1:51:12:3:9:43:27.91%:39:1.0032E-4:49:31:8:23:43 0/1:52:14:9:5:60:23.33%:45:2.5912E-5:45:46:25:21:62 0/1:51:27:13:14:82:32.93%:92:5.7096E-10:45:55:35:20:83 0/1:50:7:1:6:26:26.92%:23:4.9169E-3:43:19:10:9:27 0/1:53:20:13:7:50:40%:70:8.793E-8:45:30:18:12:50 0/0:42:4:4:0:19:21.05%:13:5.251E-2:51:15:12:3:20 0/1:47:9:3:6:29:31.03%:30:9.4048E-4:46:20:8:12:30 0/1:52:14:6:8:44:31.82%:47:1.7873E-5:49:30:15:15:44 0/1:52:12:4:8:50:24%:39:1.1557E-4:51:38:18:20:50 0/0:60:4:1:3:15:26.67%:8:4.9808E-2:51:11:5:6:15 0/1:51:12:5:7:42:28.57%:40:9.7866E-5:51:30:18:12:43 0/1:47:20:12:8:49:40.82%:70:8.2643E-8:43:29:19:10:51 0/1:48:11:5:6:29:37.93%:38:1.5195E-4:47:18:12:6:31 0/1:49:13:5:8:34:38.24%:45:2.9583E-5:47:21:9:12:34 0/1:49:13:6:7:44:29.55%:43:4.324E-5:51:31:20:11:44 0/1:47:15:5:10:42:35.71%:51:6.6622E-6:44:27:15:12:42 0/1:48:11:2:9:35:31.43%:37:1.9282E-4:40:24:12:12:35 0/1:40:10:3:7:26:38.46%:34:3.3576E-4:44:16:10:6:26 0/1:44:22:13:9:69:31.88%:74:3.2454E-8:41:47:17:30:70 0/1:49:15:9:6:47:31.91%:50:8.0864E-6:46:32:16:16:48 0/1:49:15:8:7:32:46.88%:54:3.5464E-6:46:17:11:6:33 0/1:47:9:5:4:34:26.47%:29:1.0644E-3:47:25:11:14:34 0/1:50:8:4:4:37:21.62%:25:2.5617E-3:41:29:15:14:38 0/1:44:16:5:11:43:37.21%:55:2.7433E-6:48:27:14:13:43 0/1:46:11:5:6:30:36.67%:37:1.594E-4:53:19:10:9:30 0/1:53:8:2:6:34:23.53%:26:2.4562E-3:45:26:5:21:34 0/1:48:11:5:6:32:34.38%:37:1.7351E-4:46:21:10:11:32 0/1:50:14:9:5:43:32.56%:47:1.727E-5:46:29:15:14:44 0/1:51:12:4:8:30:40%:42:6.1809E-5:54:18:8:10:30 0/1:50:14:6:8:47:29.79%:47:1.9604E-5:41:33:18:15:49 0/1:46:16:9:7:51:31.37%:54:3.7826E-6:45:35:18:17:53 0/1:47:16:6:10:58:27.59%:53:4.6015E-6:44:42:24:18:59 0/1:44:22:17:5:38:57.89%:85:3.0605E-9:42:16:7:9:38 0/1:48:13:8:5:43:30.23%:43:4.0777E-5:45:29:15:14:44 0/1:53:11:7:4:40:27.5%:36:2.2064E-4:44:29:17:12:40 0/1:47:11:4:7:36:30.56%:37:1.9879E-4:47:25:10:15:36 0/1:45:12:7:5:44:27.27%:39:1.027E-4:45:32:22:10:45 0/1:53:11:5:6:32:34.38%:37:1.7351E-4:46:21:9:12:32 0/1:44:14:5:9:44:31.82%:47:1.7873E-5:47:30:14:16:44 0/1:44:16:8:8:49:32.65%:54:3.5325E-6:44:33:16:17:51 0/1:46:7:4:3:28:25%:22:5.1054E-3:41:21:10:11:31 0/1:47:10:5:5:40:25%:32:5.1483E-4:46:30:14:16:43 0/1:52:12:4:8:41:29.27%:40:9.5339E-5:43:29:17:12:41 0/1:46:13:6:7:39:33.33%:44:3.6837E-5:49:26:14:12:39 0/1:46:15:7:8:43:34.88%:51:6.9561E-6:45:28:17:11:43 0/1:51:13:10:3:57:22.81%:42:5.6497E-5:45:44:22:22:59 0/1:45:12:4:8:43:27.91%:39:1.0032E-4:42:31:14:17:44 0/1:47:17:11:6:44:38.64%:59:1.1194E-6:44:27:13:14:45 0/1:44:13:9:4:43:30.23%:43:4.2025E-5:44:30:19:11:44 0/1:41:17:11:6:42:40.48%:60:9.9678E-7:40:25:14:11:43 0/1:46:12:6:6:42:28.57%:40:9.7866E-5:42:30:19:11:42 0/1:41:14:6:8:55:25.45%:46:2.3698E-5:40:41:24:17:56 0/1:51:13:8:5:46:28.26%:43:4.5578E-5:44:33:20:13:48 0/1:47:11:6:5:30:36.67%:37:1.594E-4:39:19:11:8:31 0/1:56:17:6:11:54:31.48%:57:1.7118E-6:46:37:16:21:54 0/1:50:14:6:8:33:42.42%:49:1.0577E-5:42:19:13:6:37 0/1:44:23:11:12:62:37.1%:80:9.6554E-9:43:39:23:16:62 0/1:49:19:11:8:70:27.14%:63:4.6433E-7:45:51:24:27:74 0/1:50:13:7:6:35:37.14%:45:3.1103E-5:48:22:5:17:35 0/1:52:14:10:4:35:40%:49:1.2005E-5:43:21:12:9:36 0/1:40:20:8:12:54:37.04%:69:1.0949E-7:42:34:20:14:56 0/1:45:13:3:10:52:25%:42:5.1909E-5:43:39:22:17:57 0/1:47:17:11:6:54:31.48%:57:1.7118E-6:41:37:24:13:57 0/1:43:15:8:7:53:28.3%:50:9.6403E-6:38:38:19:19:55 0/1:51:12:5:7:50:24%:39:1.1557E-4:43:38:16:22:53 0/1:40:10:8:2:39:25.64%:32:5.0524E-4:42:29:13:16:42 0/1:47:15:8:7:48:31.25%:50:8.3573E-6:40:33:17:16:50 0/1:44:14:8:6:56:25%:46:2.416E-5:39:42:19:23:60 0/1:47:24:12:12:56:42.86%:85:2.5383E-9:41:32:16:16:57 0/1:47:17:9:8:50:34%:58:1.4808E-6:40:33:22:11:51 0/1:44:15:6:9:52:28.85%:50:9.3931E-6:42:37:20:17:53 0/1:40:10:1:9:40:25%:32:5.1483E-4:41:30:21:9:40 0/1:51:17:9:8:52:32.69%:57:1.5975E-6:44:35:22:13:52 0/1:41:27:15:12:77:35.06%:93:4.6544E-10:39:50:31:19:79 0/1:50:18:8:10:59:30.51%:60:8.2591E-7:42:41:21:20:59 0/1:42:19:12:7:47:40.43%:67:1.9354E-7:44:28:20:8:48 0/1:47:16:7:9:44:36.36%:55:2.8784E-6:43:28:15:13:44 0/1:47:17:4:13:43:39.53%:59:1.0581E-6:42:26:14:12:43 0/1:49:12:5:7:33:36.36%:41:7.2075E-5:45:21:12:9:33 0/1:53:10:5:5:35:28.57%:33:4.6276E-4:41:25:13:12:36 0/1:52:17:10:7:54:31.48%:57:1.7118E-6:47:37:17:20:55 0/1:43:11:8:3:40:27.5%:36:2.2064E-4:43:29:15:14:42 0/1:48:8:0:8:21:38.1%:27:1.7241E-3:48:13:7:6:22 0/1:48:21:9:12:46:45.65%:76:2.4256E-8:46:25:15:10:48 0/1:51:20:12:8:57:35.09%:69:1.2588E-7:47:37:16:21:58 0/1:51:30:14:16:75:40%:99:2.4283E-11:42:45:18:27:75 0/1:42:12:7:5:51:23.53%:39:1.1751E-4:42:39:27:12:53 MTB_anc 2867231 . C T . PASS AC=142;AF=0.473;AN=300;ANN=T|synonymous_variant|LOW|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.108C>T|p.Gly36Gly|108/663|108/663|36/220||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867231C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867231C>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:52:9:4:5:59:15.25%:28:1.4054E-3:44:50:27:23:60 0/0:60:4:2:2:24:16.67%:18:5.461E-2:48:20:10:10:25 0/1:52:31:17:14:77:40.26%:99:1.0372E-11:45:46:22:24:78 0/1:48:10:4:6:35:28.57%:33:4.6276E-4:46:25:18:7:36 0/1:51:13:6:7:40:32.5%:44:3.8184E-5:46:27:12:15:40 0/0:52:6:4:2:29:20.69%:18:1.1736E-2:42:23:11:12:29 0/1:51:10:4:6:34:29.41%:33:4.51E-4:49:24:10:14:35 0/1:40:8:6:2:40:20%:25:2.653E-3:45:32:12:20:41 0/1:55:15:5:10:55:27.27%:49:1.0121E-5:47:40:24:16:57 0/0:45:6:3:3:34:17.65%:23:1.2287E-2:47:28:11:17:34 0/1:43:11:5:6:40:27.5%:36:2.2064E-4:47:29:16:13:40 0/1:51:24:13:11:60:40%:84:3.316E-9:44:36:18:18:60 0/1:52:9:4:5:53:16.98%:28:1.3495E-3:50:44:24:20:54 0/1:50:18:10:8:67:26.87%:59:1.0208E-6:47:49:28:21:68 0/1:55:9:3:6:31:29.03%:30:9.9376E-4:40:22:6:16:31 0/1:55:15:5:10:46:32.61%:51:7.8109E-6:46:31:17:14:49 0/1:41:18:10:8:35:51.43%:67:1.9562E-7:43:17:9:8:35 0/1:49:11:3:8:38:28.95%:36:2.1011E-4:46:27:13:14:39 0/1:51:9:5:4:25:36%:30:8.1542E-4:44:16:11:5:26 0/1:59:10:5:5:38:26.32%:33:4.9525E-4:49:28:14:14:40 0/1:42:10:5:5:35:28.57%:33:4.6276E-4:49:25:13:12:39 0/1:47:20:12:8:66:30.3%:67:1.7467E-7:43:46:24:22:67 0/1:50:12:8:4:36:33.33%:41:7.8434E-5:51:23:13:10:36 0/1:48:10:3:7:46:21.74%:32:5.6532E-4:43:36:20:16:46 0/1:46:13:8:5:33:39.39%:45:2.8029E-5:40:20:8:12:33 0/1:50:9:7:2:35:25.71%:29:1.0857E-3:50:26:10:16:35 0/1:48:13:5:8:31:41.94%:46:2.4825E-5:47:18:13:5:31 0/1:52:9:4:5:40:22.5%:29:1.1791E-3:50:31:16:15:40 0/1:47:17:9:8:37:45.95%:61:6.9312E-7:39:20:13:7:37 0/1:46:10:4:6:41:24.39%:32:5.2405E-4:42:31:19:12:42 0/1:48:10:3:7:33:30.3%:33:4.3872E-4:47:23:12:11:34 0/1:44:13:3:10:44:29.55%:43:4.324E-5:46:31:17:14:44 0/1:52:10:7:3:40:25%:32:5.1483E-4:51:30:18:12:41 0/1:48:15:5:10:40:37.5%:52:6.0618E-6:42:25:17:8:40 0/1:50:20:13:7:50:40%:70:8.793E-8:46:30:18:12:52 0/1:46:13:8:5:50:26%:43:4.9906E-5:45:37:15:22:50 0/1:50:13:7:6:55:23.64%:42:5.473E-5:46:42:25:17:56 0/1:53:24:15:9:78:30.77%:81:7.3426E-9:47:54:28:26:79 0/1:54:18:7:11:61:29.51%:60:8.7622E-7:47:43:22:21:63 0/1:47:16:7:9:53:30.19%:53:4.0256E-6:45:37:20:17:53 0/1:49:13:7:6:40:32.5%:44:3.8184E-5:46:27:13:14:40 0/1:52:15:9:6:61:24.59%:49:1.1457E-5:45:46:20:26:62 0/1:52:12:2:10:36:33.33%:40:8.1472E-5:46:24:12:12:36 0/1:47:16:8:8:33:48.48%:58:1.364E-6:47:17:8:9:33 0/1:44:7:6:1:38:18.42%:22:5.7727E-3:43:31:23:8:40 0/1:52:12:8:4:46:26.09%:39:1.0724E-4:43:34:17:17:46 0/1:47:11:5:6:35:31.43%:37:1.9282E-4:46:24:14:10:35 0/1:46:13:10:3:45:28.89%:43:4.4424E-5:47:32:21:11:45 0/1:48:22:11:11:42:52.38%:82:5.4836E-9:45:20:12:8:42 0/1:48:11:6:5:45:24.44%:36:2.4398E-4:49:34:14:20:46 0/0:53:6:4:2:27:22.22%:16:1.1461E-2:49:21:10:11:27 0/1:45:11:4:7:46:23.91%:36:2.4819E-4:46:35:15:20:46 0/1:56:12:9:3:35:34.29%:41:7.8434E-5:51:23:10:13:37 0/1:42:10:5:5:45:22.22%:32:5.5766E-4:49:35:21:14:46 0/0:49:6:1:5:32:18.75%:20:1.2087E-2:43:26:15:11:32 0/1:46:14:7:7:47:29.79%:47:1.9604E-5:43:33:15:18:47 0/1:47:18:12:6:48:37.5%:62:5.3443E-7:41:30:15:15:48 0/0:49:6:2:4:43:13.95%:36:1.2967E-2:45:37:21:16:44 0/1:45:11:7:4:43:25.58%:36:2.3512E-4:44:32:16:16:43 0/1:50:20:10:10:65:30.77%:67:1.6933E-7:47:45:21:24:66 0/1:54:12:6:6:38:31.58%:40:8.7276E-5:43:26:15:11:38 0/1:50:19:10:9:50:38%:66:2.2975E-7:47:31:10:21:50 0/1:44:18:12:6:55:32.73%:61:7.2242E-7:45:37:20:17:57 0/1:50:12:3:9:42:28.57%:40:9.7866E-5:49:30:8:22:43 0/1:52:14:9:5:60:23.33%:45:2.5912E-5:45:46:26:20:63 0/1:50:28:13:15:82:34.15%:96:2.2922E-10:45:54:35:19:83 0/1:49:8:2:6:27:29.63%:26:2.1337E-3:45:19:10:9:27 0/1:54:19:12:7:48:39.58%:66:2.0555E-7:43:29:17:12:50 0/0:42:4:4:0:19:21.05%:13:5.251E-2:50:15:12:3:20 0/1:49:8:3:5:28:28.57%:26:2.188E-3:46:20:8:12:29 0/1:52:14:6:8:44:31.82%:47:1.7873E-5:49:30:15:15:44 0/1:52:12:4:8:49:24.49%:39:1.1358E-4:51:37:17:20:50 0/0:60:4:1:3:15:26.67%:8:4.9808E-2:50:11:5:6:15 0/1:52:12:5:7:42:28.57%:40:9.7866E-5:51:30:18:12:42 0/1:45:21:13:8:51:41.18%:74:3.5259E-8:42:30:21:9:52 0/1:48:11:5:6:30:36.67%:37:1.594E-4:48:19:12:7:31 0/1:49:13:5:8:33:39.39%:45:2.8029E-5:48:20:8:12:34 0/1:49:13:6:7:45:28.89%:43:4.4424E-5:49:32:21:11:45 0/1:48:15:5:10:42:35.71%:51:6.6622E-6:44:27:15:12:42 0/1:48:11:2:9:34:32.35%:37:1.8662E-4:39:23:12:11:34 0/1:37:10:3:7:26:38.46%:34:3.3576E-4:44:16:10:6:26 0/1:47:20:11:9:68:29.41%:67:1.8526E-7:41:48:18:30:69 0/1:47:16:10:6:48:33.33%:54:3.4048E-6:45:32:16:16:48 0/1:49:15:8:7:33:45.45%:54:3.8647E-6:45:18:11:7:33 0/1:49:8:4:4:33:24.24%:26:2.4173E-3:47:25:11:14:33 0/1:52:9:4:5:37:24.32%:29:1.1256E-3:39:28:16:12:38 0/1:42:16:5:11:41:39.02%:56:2.4696E-6:49:25:14:11:42 0/1:46:11:5:6:30:36.67%:37:1.594E-4:53:19:10:9:30 0/1:54:8:2:6:34:23.53%:26:2.4562E-3:46:26:5:21:34 0/1:48:11:5:6:31:35.48%:37:1.6659E-4:47:20:10:10:32 0/1:50:14:9:5:42:33.33%:47:1.6656E-5:46:28:14:14:42 0/1:50:12:4:8:30:40%:42:6.1809E-5:53:18:8:10:30 0/1:49:15:7:8:48:31.25%:50:8.3573E-6:40:33:18:15:49 0/1:45:17:9:8:52:32.69%:57:1.5975E-6:45:35:18:17:53 0/1:46:17:7:10:59:28.81%:57:1.9861E-6:43:42:24:18:59 0/1:44:22:17:5:37:59.46%:85:2.5665E-9:44:15:7:8:38 0/1:47:13:8:5:43:30.23%:43:4.2025E-5:44:30:16:14:44 0/1:52:11:7:4:39:28.21%:36:2.1547E-4:44:28:16:12:40 0/1:46:12:4:8:35:34.29%:41:7.8434E-5:47:23:10:13:36 0/1:45:12:7:5:45:26.67%:39:1.05E-4:45:33:22:11:45 0/1:52:11:5:6:31:35.48%:37:1.6659E-4:47:20:9:11:31 0/1:42:14:5:9:44:31.82%:47:1.7873E-5:47:30:14:16:44 0/1:44:16:8:8:49:32.65%:54:3.5325E-6:42:33:16:17:51 0/1:45:8:4:4:29:27.59%:26:2.2392E-3:44:21:11:10:29 0/1:46:10:5:5:41:24.39%:32:5.2405E-4:47:31:17:14:43 0/1:50:12:4:8:41:29.27%:40:9.5339E-5:42:29:17:12:41 0/1:46:13:6:7:37:35.14%:44:3.404E-5:49:24:13:11:39 0/1:46:15:7:8:42:35.71%:51:6.6622E-6:44:27:16:11:42 0/1:51:13:10:3:56:23.21%:42:5.5625E-5:44:43:22:21:59 0/1:44:13:4:9:42:30.95%:43:4.0777E-5:41:29:13:16:44 0/1:48:17:11:6:45:37.78%:59:1.1805E-6:43:28:13:15:45 0/1:45:13:9:4:43:30.23%:43:4.2025E-5:44:30:19:11:44 0/1:41:17:11:6:42:40.48%:60:9.9678E-7:40:25:15:10:43 0/1:47:12:6:6:41:29.27%:40:9.5339E-5:41:29:18:11:42 0/1:40:14:6:8:55:25.45%:46:2.3698E-5:39:41:24:17:56 0/1:52:13:8:5:47:27.66%:43:4.6702E-5:43:34:20:14:48 0/1:50:10:5:5:28:35.71%:34:3.6855E-4:37:18:10:8:30 0/1:56:17:6:11:54:31.48%:57:1.7118E-6:46:37:16:21:54 0/1:48:14:6:8:38:36.84%:48:1.407E-5:40:24:15:9:38 0/1:43:23:11:12:62:37.1%:80:9.6554E-9:43:39:23:16:62 0/1:49:19:11:8:75:25.33%:62:5.1739E-7:43:56:25:31:76 0/1:49:13:7:6:35:37.14%:45:3.1103E-5:47:22:5:17:35 0/1:52:14:10:4:35:40%:49:1.2005E-5:44:21:13:8:36 0/1:39:20:8:12:57:35.09%:69:1.2588E-7:40:37:20:17:58 0/1:45:13:4:9:54:24.07%:42:5.3813E-5:41:41:23:18:56 0/1:46:17:11:6:55:30.91%:57:1.768E-6:41:38:24:14:57 0/1:43:15:8:7:54:27.78%:50:9.8829E-6:38:39:21:18:55 0/1:49:13:6:7:51:25.49%:42:5.092E-5:42:38:17:21:53 0/1:39:10:8:2:39:25.64%:32:5.0524E-4:40:29:14:15:41 0/1:48:15:8:7:48:31.25%:50:8.3573E-6:40:33:17:16:50 0/1:43:14:8:6:57:24.56%:46:2.4613E-5:40:43:20:23:59 0/1:47:24:12:12:56:42.86%:85:2.5383E-9:41:32:16:16:57 0/1:45:17:9:8:50:34%:58:1.4808E-6:40:33:22:11:51 0/1:44:14:5:9:50:28%:46:2.1224E-5:42:36:20:16:52 0/1:40:10:1:9:39:25.64%:32:5.0524E-4:41:29:20:9:40 0/1:51:17:9:8:51:33.33%:58:1.5394E-6:45:34:21:13:52 0/1:41:26:15:11:76:34.21%:89:1.1215E-9:38:50:30:20:79 0/1:50:18:8:10:59:30.51%:60:8.2591E-7:42:41:21:20:59 0/1:42:19:12:7:47:40.43%:67:1.9354E-7:44:28:20:8:48 0/1:47:16:7:9:43:37.21%:55:2.7433E-6:43:27:15:12:44 0/1:48:16:4:12:43:37.21%:55:2.7433E-6:41:27:16:11:44 0/1:50:12:5:7:33:36.36%:41:7.2075E-5:46:21:12:9:33 0/1:53:10:5:5:35:28.57%:33:4.6276E-4:42:25:13:12:36 0/1:51:17:10:7:54:31.48%:57:1.7118E-6:46:37:17:20:55 0/1:44:11:8:3:41:26.83%:36:2.2563E-4:43:30:15:15:41 0/1:45:9:1:8:22:40.91%:31:7.0165E-4:47:13:7:6:22 0/1:49:20:9:11:45:44.44%:72:6.2178E-8:46:25:14:11:47 0/1:51:20:12:8:56:35.71%:69:1.204E-7:47:36:16:20:57 0/1:51:30:14:16:73:41.1%:99:2.1366E-11:42:43:18:25:74 0/1:43:11:7:4:48:22.92%:35:2.5621E-4:42:37:27:10:52 MTB_anc 2867236 . A G . PASS AC=142;AF=0.473;AN=300;ANN=G|missense_variant|MODERATE|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.113A>G|p.Asn38Ser|113/663|113/663|38/220||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867236A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867236A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:52:9:4:5:59:15.25%:28:1.4054E-3:43:50:27:23:60 0/0:60:4:2:2:27:14.81%:23:5.5494E-2:48:23:11:12:27 0/1:51:31:17:14:77:40.26%:99:1.0372E-11:44:46:22:24:77 0/1:48:10:4:6:37:27.03%:33:4.8486E-4:46:27:18:9:37 0/1:48:13:6:7:40:32.5%:44:3.8184E-5:45:27:12:15:40 0/0:52:6:4:2:28:21.43%:16:1.1603E-2:43:22:11:11:29 0/1:51:10:4:6:34:29.41%:33:4.51E-4:49:24:10:14:35 0/1:40:8:6:2:41:19.51%:25:2.6808E-3:44:33:13:20:41 0/1:56:15:5:10:56:26.79%:49:1.0354E-5:47:41:23:18:57 0/0:45:6:3:3:34:17.65%:23:1.2287E-2:48:28:12:16:35 0/1:44:10:5:5:39:25.64%:32:5.0524E-4:47:29:17:12:39 0/1:51:24:13:11:60:40%:84:3.316E-9:45:36:17:19:60 0/1:52:9:4:5:51:17.65%:28:1.3283E-3:51:42:22:20:51 0/1:50:18:10:8:68:26.47%:59:1.044E-6:46:50:29:21:68 0/1:55:9:3:6:29:31.03%:30:9.4048E-4:41:20:5:15:30 0/1:52:15:5:10:46:32.61%:51:7.8109E-6:46:31:15:16:49 0/1:42:18:10:8:34:52.94%:67:1.7305E-7:44:16:9:7:35 0/1:49:11:3:8:39:28.21%:36:2.1547E-4:42:28:12:16:40 0/1:52:9:5:4:25:36%:30:8.1542E-4:43:16:11:5:25 0/1:60:9:5:4:39:23.08%:29:1.162E-3:48:30:16:14:39 0/1:39:10:6:4:35:28.57%:33:4.6276E-4:49:25:12:13:37 0/1:46:20:12:8:64:31.25%:67:1.6397E-7:42:44:22:22:66 0/1:49:12:8:4:36:33.33%:40:8.1472E-5:51:24:13:11:36 0/1:47:10:3:7:46:21.74%:32:5.6532E-4:43:36:20:16:46 0/1:44:12:8:4:32:37.5%:41:6.8751E-5:41:20:7:13:32 0/1:47:9:7:2:35:25.71%:29:1.0857E-3:49:26:10:16:36 0/1:48:13:5:8:31:41.94%:46:2.4825E-5:50:18:13:5:31 0/1:52:9:4:5:42:21.43%:29:1.2112E-3:49:33:16:17:42 0/1:46:16:8:8:35:45.71%:57:1.637E-6:41:19:12:7:37 0/1:44:11:5:6:42:26.19%:36:2.3046E-4:41:31:17:14:43 0/1:48:10:3:7:33:30.3%:33:4.3872E-4:46:23:12:11:33 0/1:44:13:3:10:44:29.55%:43:4.324E-5:46:31:16:15:44 0/1:53:10:7:3:41:24.39%:32:5.2405E-4:49:31:19:12:41 0/1:47:15:5:10:43:34.88%:51:6.9561E-6:42:28:18:10:43 0/1:49:20:13:7:50:40%:70:8.793E-8:47:30:17:13:51 0/1:46:11:6:5:51:21.57%:35:2.6733E-4:45:40:17:23:51 0/1:50:13:7:6:56:23.21%:42:5.5625E-5:47:43:24:19:57 0/1:52:24:15:9:80:30%:81:7.8121E-9:46:56:29:27:82 0/1:50:19:8:11:58:32.76%:64:3.2669E-7:47:39:21:18:60 0/1:45:16:7:9:52:30.77%:54:3.905E-6:44:36:19:17:52 0/1:49:13:7:6:40:32.5%:44:3.8184E-5:46:27:13:14:41 0/1:52:15:9:6:62:24.19%:49:1.1665E-5:44:47:21:26:62 0/1:52:12:2:10:34:35.29%:41:7.5302E-5:48:22:11:11:35 0/1:47:16:8:8:33:48.48%:58:1.364E-6:47:17:8:9:33 0/1:44:7:6:1:37:18.92%:22:5.721E-3:43:30:22:8:39 0/1:55:11:7:4:45:24.44%:36:2.4398E-4:42:34:18:16:46 0/1:47:11:5:6:35:31.43%:37:1.9282E-4:47:24:14:10:36 0/1:44:13:10:3:45:28.89%:43:4.4424E-5:46:32:22:10:46 0/1:47:22:11:11:41:53.66%:83:4.8137E-9:45:19:11:8:41 0/1:49:11:6:5:45:24.44%:36:2.4398E-4:48:34:14:20:46 0/0:52:6:4:2:28:21.43%:16:1.1603E-2:47:22:10:12:28 0/1:43:10:3:7:45:22.22%:32:5.5766E-4:45:35:15:20:46 0/1:55:12:9:3:38:31.58%:40:8.7276E-5:46:26:12:14:38 0/1:43:10:5:5:46:21.74%:32:5.6532E-4:48:36:23:13:47 0/0:48:6:1:5:31:19.35%:20:1.1977E-2:43:25:15:10:32 0/1:44:14:7:7:45:31.11%:47:1.8462E-5:44:31:14:17:46 0/1:47:17:11:6:46:36.96%:59:1.2413E-6:41:29:15:14:47 0/0:48:6:2:4:45:13.33%:39:1.3082E-2:45:39:23:16:45 0/1:47:9:5:4:41:21.95%:29:1.1955E-3:45:32:16:16:42 0/1:48:20:10:10:67:29.85%:67:1.7998E-7:47:47:23:24:67 0/1:55:11:5:6:37:29.73%:36:2.0455E-4:44:26:14:12:39 0/1:49:19:10:9:47:40.43%:67:1.9354E-7:49:28:8:20:49 0/1:45:18:12:6:58:31.03%:60:8.0038E-7:45:40:24:16:59 0/1:50:12:3:9:43:27.91%:39:1.0032E-4:48:31:8:23:43 0/1:52:14:8:6:62:22.58%:45:2.6327E-5:43:47:27:20:63 0/1:49:28:13:15:84:33.33%:96:2.4842E-10:44:56:35:21:84 0/1:47:7:2:5:26:26.92%:23:4.9169E-3:44:19:10:9:26 0/1:52:20:13:7:51:39.22%:70:9.3266E-8:43:31:19:12:51 0/0:46:4:4:0:19:21.05%:13:5.251E-2:51:15:12:3:20 0/1:50:7:3:4:27:25.93%:22:5.0143E-3:46:20:7:13:28 0/1:51:14:6:8:44:31.82%:47:1.7873E-5:50:30:15:15:44 0/1:52:12:4:8:50:24%:39:1.1557E-4:52:38:18:20:52 0/0:54:4:1:3:15:26.67%:8:4.9808E-2:53:11:5:6:15 0/1:48:11:5:6:40:27.5%:36:2.2064E-4:49:29:17:12:40 0/1:47:20:12:8:53:37.74%:69:1.0405E-7:41:33:22:11:53 0/1:47:11:5:6:30:36.67%:37:1.594E-4:48:19:12:7:31 0/1:49:13:5:8:35:37.14%:45:3.1103E-5:45:22:10:12:35 0/1:48:13:6:7:46:28.26%:43:4.5578E-5:49:33:20:13:47 0/1:46:15:5:10:40:37.5%:52:6.0618E-6:44:25:13:12:41 0/1:45:11:2:9:34:32.35%:37:1.8662E-4:39:23:12:11:34 0/1:37:10:3:7:27:37.04%:34:3.5253E-4:45:17:11:6:27 0/1:46:21:12:9:67:31.34%:71:7.4203E-8:41:46:16:30:68 0/1:48:14:8:6:47:29.79%:47:1.9604E-5:45:33:17:16:47 0/1:49:15:8:7:34:44.12%:53:4.1835E-6:43:19:11:8:35 0/1:48:8:4:4:32:25%:26:2.3764E-3:47:24:9:15:34 0/1:50:8:4:4:37:21.62%:25:2.5617E-3:42:29:15:14:37 0/1:46:15:5:10:41:36.59%:51:6.364E-6:50:26:14:12:41 0/1:45:11:5:6:31:35.48%:37:1.6659E-4:52:20:11:9:31 0/1:54:8:2:6:32:25%:26:2.3764E-3:47:24:5:19:34 0/1:47:11:5:6:33:33.33%:37:1.8019E-4:47:22:10:12:33 0/1:50:14:9:5:42:33.33%:47:1.6656E-5:46:28:14:14:42 0/1:52:12:4:8:31:38.71%:41:6.5329E-5:53:19:8:11:31 0/1:48:15:7:8:48:31.25%:50:8.3573E-6:40:33:19:14:51 0/1:45:17:9:8:53:32.08%:57:1.655E-6:45:36:19:17:53 0/1:46:14:5:9:54:25.93%:46:2.3225E-5:45:40:23:17:55 0/1:44:22:17:5:38:57.89%:85:3.0605E-9:43:16:7:9:38 0/1:49:13:8:5:42:30.95%:43:4.0777E-5:43:29:14:15:45 0/1:54:11:7:4:40:27.5%:36:2.2064E-4:42:29:17:12:41 0/1:47:11:4:7:35:31.43%:37:1.9282E-4:46:24:10:14:36 0/1:45:12:7:5:43:27.91%:39:1.0032E-4:45:31:21:10:45 0/1:53:11:5:6:31:35.48%:37:1.6659E-4:47:20:9:11:32 0/1:43:14:5:9:44:31.82%:47:1.7873E-5:47:30:14:16:44 0/1:43:16:8:8:50:32%:54:3.6584E-6:42:34:17:17:51 0/1:45:8:4:4:28:28.57%:26:2.188E-3:43:20:10:10:28 0/1:48:9:4:5:39:23.08%:29:1.162E-3:48:30:16:14:42 0/1:50:12:4:8:39:30.77%:40:9.0046E-5:43:27:16:11:40 0/1:46:13:6:7:38:34.21%:44:3.5456E-5:48:25:14:11:39 0/1:46:15:7:8:42:35.71%:51:6.6622E-6:45:27:15:12:42 0/1:51:13:10:3:56:23.21%:42:5.5625E-5:44:43:20:23:57 0/1:46:13:4:9:44:29.55%:43:4.324E-5:41:31:14:17:44 0/1:48:17:11:6:44:38.64%:59:1.1194E-6:45:27:13:14:45 0/1:44:13:9:4:43:30.23%:43:4.2025E-5:44:30:19:11:45 0/1:40:16:10:6:41:39.02%:56:2.4696E-6:40:25:14:11:43 0/1:47:12:6:6:42:28.57%:40:9.7866E-5:40:30:19:11:42 0/1:40:14:6:8:56:25%:46:2.416E-5:40:42:26:16:57 0/1:51:13:8:5:49:26.53%:43:4.8866E-5:43:36:22:14:50 0/1:48:10:5:5:27:37.04%:34:3.5253E-4:40:17:11:6:31 0/1:56:17:6:11:56:30.36%:57:1.8236E-6:45:39:16:23:56 0/1:48:13:5:8:34:38.24%:45:2.9583E-5:40:21:13:8:36 0/1:42:23:11:12:61:37.7%:80:9.1717E-9:43:38:22:16:61 0/1:50:18:10:8:75:24%:59:1.1982E-6:43:57:25:32:77 0/1:49:13:7:6:37:35.14%:44:3.404E-5:45:24:6:18:37 0/1:51:13:9:4:34:38.24%:45:2.9583E-5:43:21:12:9:36 0/1:40:20:8:12:57:35.09%:69:1.2588E-7:40:37:21:16:58 0/1:43:12:3:9:53:22.64%:39:1.2122E-4:42:41:23:18:57 0/1:46:17:11:6:55:30.91%:57:1.768E-6:40:38:25:13:58 0/1:43:14:7:7:53:26.42%:46:2.2741E-5:36:39:20:19:55 0/1:52:12:5:7:51:23.53%:39:1.1751E-4:41:39:17:22:53 0/1:39:10:8:2:39:25.64%:32:5.0524E-4:40:29:15:14:41 0/1:47:13:6:7:47:27.66%:43:4.6702E-5:40:34:19:15:48 0/1:43:14:8:6:58:24.14%:46:2.5055E-5:41:44:19:25:58 0/1:47:23:11:12:57:40.35%:81:7.2965E-9:41:34:18:16:59 0/1:45:17:9:8:49:34.69%:58:1.4216E-6:39:32:23:9:51 0/1:45:13:5:8:50:26%:43:4.9906E-5:41:37:20:17:53 0/1:40:10:1:9:39:25.64%:32:5.0524E-4:41:29:20:9:40 0/1:51:17:9:8:49:34.69%:58:1.4216E-6:45:32:21:11:50 0/1:41:26:15:11:76:34.21%:89:1.1215E-9:38:50:32:18:80 0/1:50:18:8:10:60:30%:60:8.5119E-7:42:42:22:20:62 0/1:41:19:12:7:48:39.58%:66:2.0555E-7:44:29:20:9:50 0/1:46:16:7:9:45:35.56%:55:3.0122E-6:42:29:16:13:45 0/1:48:16:4:12:43:37.21%:55:2.7433E-6:40:27:16:11:44 0/1:48:12:5:7:34:35.29%:41:7.5302E-5:44:22:12:10:34 0/1:48:10:5:5:38:26.32%:33:4.9525E-4:42:28:15:13:38 0/1:51:17:10:7:54:31.48%:57:1.7118E-6:46:37:17:20:54 0/1:43:10:7:3:40:25%:32:5.1483E-4:43:30:14:16:40 0/1:44:9:1:8:24:37.5%:31:7.7962E-4:45:15:9:6:24 0/1:48:21:9:12:47:44.68%:75:2.6363E-8:46:26:15:11:48 0/1:51:20:12:8:57:35.09%:69:1.2588E-7:47:37:16:21:57 0/1:51:30:14:16:74:40.54%:99:2.2803E-11:42:44:17:27:75 0/1:43:10:6:4:48:20.83%:32:5.7985E-4:41:38:26:12:51 MTB_anc 2867240 . C T . PASS AC=143;AF=0.477;AN=300;ANN=T|synonymous_variant|LOW|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.117C>T|p.Pro39Pro|117/663|117/663|39/220||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867240C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867240C>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:50:9:4:5:59:15.25%:28:1.4054E-3:42:50:26:24:60 0/0:58:4:2:2:28:14.29%:23:5.5494E-2:47:23:12:11:28 0/1:51:30:17:13:75:40%:99:2.4283E-11:43:45:21:24:76 0/1:47:10:4:6:36:27.78%:33:4.7404E-4:46:26:17:9:36 0/1:49:12:6:6:40:30%:40:9.2733E-5:45:28:13:15:41 0/0:52:6:4:2:28:21.43%:16:1.1603E-2:43:22:10:12:28 0/1:50:10:4:6:35:28.57%:33:4.6276E-4:48:25:10:15:35 0/1:40:8:6:2:41:19.51%:25:2.6808E-3:45:33:13:20:41 0/1:55:15:5:10:57:26.32%:49:1.0583E-5:47:42:24:18:57 0/0:45:6:3:3:34:17.65%:23:1.2287E-2:48:28:12:16:34 0/1:43:10:5:5:39:25.64%:32:5.0524E-4:48:29:17:12:39 0/1:51:24:13:11:61:39.34%:84:3.5204E-9:45:37:17:20:62 0/1:52:9:4:5:52:17.31%:28:1.3391E-3:51:43:22:21:52 0/1:50:18:10:8:67:26.87%:59:1.0208E-6:46:49:29:20:67 0/1:55:9:3:6:30:30%:30:9.678E-4:41:21:7:14:30 0/1:52:15:5:10:47:31.91%:50:8.0864E-6:45:32:17:15:49 0/1:42:18:10:8:35:51.43%:67:1.7305E-7:45:16:9:7:35 0/1:50:11:3:8:40:27.5%:36:2.1547E-4:44:28:13:15:40 0/1:52:9:5:4:26:34.62%:30:8.4928E-4:43:17:11:6:26 0/1:59:9:5:4:39:23.08%:29:1.162E-3:48:30:17:13:39 0/1:40:10:6:4:33:30.3%:33:4.3872E-4:50:23:11:12:35 0/1:46:20:12:8:66:30.3%:67:1.7467E-7:43:46:23:23:67 0/1:50:12:8:4:37:32.43%:40:8.4418E-5:50:25:14:11:37 0/1:48:10:3:7:44:22.73%:32:5.4972E-4:44:34:19:15:45 0/1:44:13:8:5:30:43.33%:46:2.1506E-5:42:16:7:9:31 0/1:46:8:6:2:35:22.86%:26:2.4562E-3:50:26:11:15:36 0/1:48:13:5:8:31:41.94%:46:2.3178E-5:50:17:13:4:31 0/1:51:9:4:5:38:23.68%:29:1.1442E-3:51:29:14:15:38 0/1:46:17:9:8:38:44.74%:61:7.5297E-7:41:21:13:8:38 0/1:47:12:5:7:43:27.91%:39:1.0032E-4:41:31:17:14:43 0/1:49:10:3:7:34:29.41%:33:4.51E-4:46:24:13:11:34 0/1:46:13:3:10:43:30.23%:43:4.2025E-5:45:30:15:15:43 0/1:53:10:7:3:42:23.81%:32:5.3293E-4:49:32:20:12:42 0/1:48:15:5:10:43:34.88%:51:6.9561E-6:42:28:18:10:43 0/1:49:20:13:7:50:40%:70:8.793E-8:47:30:17:13:50 0/1:47:12:7:5:52:23.08%:39:1.1939E-4:45:40:17:23:52 0/1:49:13:7:6:58:22.41%:42:5.7349E-5:46:45:26:19:58 0/1:51:24:15:9:82:29.27%:80:8.282E-9:46:58:29:29:83 0/1:51:19:8:11:61:31.15%:64:3.6228E-7:47:42:21:21:61 0/1:46:16:7:9:50:32%:54:3.6584E-6:44:34:18:16:50 0/1:49:13:7:6:41:31.71%:44:3.9497E-5:46:28:13:15:41 0/1:52:15:9:6:61:24.59%:49:1.1457E-5:45:46:20:26:61 0/1:52:12:2:10:35:34.29%:41:7.8434E-5:46:23:12:11:35 0/1:47:16:8:8:33:48.48%:58:1.364E-6:48:17:8:9:33 0/1:44:7:6:1:36:19.44%:22:5.6667E-3:43:29:22:7:38 0/1:52:12:8:4:44:27.27%:39:1.027E-4:42:32:16:16:44 0/1:48:11:5:6:36:30.56%:37:1.9879E-4:45:25:14:11:36 0/1:45:13:10:3:47:27.66%:43:4.6702E-5:47:34:23:11:47 0/1:48:22:11:11:40:55%:83:4.1855E-9:44:18:10:8:41 0/1:49:11:6:5:45:24.44%:36:2.3962E-4:49:33:13:20:46 0/0:52:6:4:2:28:21.43%:16:1.1603E-2:48:22:10:12:28 0/1:44:10:3:7:43:23.26%:32:5.3293E-4:47:32:15:17:44 0/1:56:12:9:3:40:30%:40:9.0046E-5:46:27:13:14:40 0/1:44:10:5:5:48:20.83%:32:5.7985E-4:49:38:23:15:48 0/1:45:7:1:6:32:21.88%:22:5.4182E-3:44:25:14:11:32 0/1:46:13:7:6:45:28.89%:43:4.4424E-5:45:32:14:18:46 0/1:48:17:11:6:46:36.96%:59:1.2413E-6:41:29:15:14:47 0/0:49:6:2:4:44:13.64%:36:1.3026E-2:45:38:22:16:44 0/1:46:10:6:4:42:23.81%:32:5.3293E-4:45:32:16:16:42 0/1:49:20:10:10:67:29.85%:67:1.7998E-7:46:47:23:24:67 0/1:54:12:6:6:39:30.77%:40:9.0046E-5:44:27:15:12:39 0/1:47:19:10:9:49:38.78%:66:2.1763E-7:47:30:8:22:49 0/1:45:18:12:6:58:31.03%:60:8.0038E-7:45:40:23:17:59 0/1:51:12:3:9:42:28.57%:40:9.7866E-5:51:30:8:22:42 0/1:49:15:9:6:64:23.44%:49:1.2069E-5:43:49:28:21:64 0/1:48:28:13:15:84:33.33%:96:2.4842E-10:44:56:35:21:85 0/1:47:7:2:5:25:28%:23:4.8126E-3:44:18:9:9:25 0/1:53:20:13:7:53:37.74%:69:1.0405E-7:42:33:20:13:53 0/0:48:4:4:0:19:21.05%:13:5.251E-2:53:15:12:3:20 0/1:48:8:3:5:28:28.57%:26:2.1337E-3:45:19:8:11:28 0/1:52:14:6:8:44:31.82%:47:1.7873E-5:48:30:15:15:44 0/1:52:12:4:8:52:23.08%:39:1.1939E-4:51:40:18:22:52 0/0:54:4:1:3:14:28.57%:6:4.8889E-2:55:10:4:6:15 0/1:49:11:5:6:42:26.19%:36:2.3046E-4:50:31:18:13:42 0/1:47:21:13:8:53:39.62%:73:3.9927E-8:42:32:21:11:53 0/1:50:11:5:6:31:35.48%:37:1.6659E-4:46:20:12:8:31 0/1:47:13:5:8:36:36.11%:44:3.2589E-5:47:23:10:13:36 0/1:47:13:6:7:46:28.26%:43:4.5578E-5:48:33:20:13:46 0/1:45:16:5:11:42:38.1%:55:2.607E-6:45:26:15:11:42 0/1:48:11:2:9:32:34.38%:37:1.7351E-4:40:21:11:10:32 0/1:37:10:3:7:26:38.46%:34:3.3576E-4:45:16:10:6:27 0/1:46:21:12:9:67:31.34%:71:7.4203E-8:42:46:17:29:67 0/1:51:15:9:6:46:32.61%:51:7.8109E-6:44:31:15:16:46 0/1:49:15:8:7:35:42.86%:53:4.5018E-6:45:20:13:7:36 0/1:45:8:4:4:34:23.53%:26:2.4562E-3:46:26:11:15:34 0/1:51:8:4:4:37:21.62%:25:2.5617E-3:42:29:15:14:37 0/1:46:15:5:10:41:36.59%:51:6.364E-6:49:26:14:12:41 0/1:46:11:5:6:32:34.38%:37:1.7351E-4:51:21:11:10:32 0/1:54:8:2:6:34:23.53%:26:2.4562E-3:46:26:5:21:34 0/1:48:11:5:6:33:33.33%:37:1.8019E-4:47:22:10:12:33 0/1:50:14:9:5:40:35%:48:1.5388E-5:46:26:13:13:40 0/1:52:12:4:8:31:38.71%:41:6.5329E-5:52:19:8:11:31 0/1:49:15:7:8:50:30%:50:8.8847E-6:40:35:20:15:52 0/1:45:17:9:8:50:34%:58:1.4808E-6:46:33:16:17:51 0/1:47:14:5:9:55:25.45%:46:2.3698E-5:45:41:24:17:55 0/1:44:22:17:5:38:57.89%:85:3.0605E-9:46:16:7:9:38 0/1:49:13:8:5:44:29.55%:43:4.324E-5:44:31:16:15:45 0/1:54:11:7:4:41:26.83%:36:2.2563E-4:42:30:16:14:42 0/1:46:11:4:7:36:30.56%:37:1.9879E-4:46:25:10:15:36 0/1:43:12:7:5:43:27.91%:39:1.0032E-4:45:31:20:11:43 0/1:52:11:5:6:32:34.38%:37:1.7351E-4:46:21:10:11:32 0/1:43:14:5:9:44:31.82%:47:1.7873E-5:47:30:14:16:44 0/1:42:16:9:7:50:32%:54:3.6584E-6:42:34:17:17:51 0/1:44:8:4:4:27:29.63%:26:2.1337E-3:43:19:9:10:28 0/1:49:9:4:5:40:22.5%:29:1.1791E-3:48:31:17:14:42 0/1:46:12:4:8:40:30%:40:9.2733E-5:42:28:16:12:40 0/1:46:13:6:7:38:34.21%:44:3.5456E-5:47:25:14:11:39 0/1:45:15:7:8:42:35.71%:51:6.6622E-6:46:27:15:12:42 0/1:49:13:10:3:56:23.21%:42:5.5625E-5:44:43:20:23:58 0/1:44:13:4:9:45:28.89%:43:4.4424E-5:42:32:15:17:45 0/1:48:17:11:6:45:37.78%:59:1.1805E-6:45:28:13:15:45 0/1:44:13:9:4:46:28.26%:43:4.5578E-5:44:33:21:12:46 0/1:41:17:11:6:43:39.53%:59:1.0581E-6:40:26:15:11:43 0/1:45:12:6:6:42:28.57%:40:9.7866E-5:40:30:19:11:42 0/1:40:14:6:8:57:24.56%:46:2.4613E-5:39:43:26:17:57 0/1:51:13:8:5:50:26%:43:4.9906E-5:42:37:23:14:51 0/1:48:10:5:5:30:33.33%:33:3.9851E-4:39:20:12:8:30 0/1:54:17:6:11:56:30.36%:57:1.8236E-6:45:39:16:23:57 0/1:47:14:6:8:32:43.75%:50:9.8512E-6:43:18:10:8:35 0/1:42:22:10:12:59:37.29%:76:2.133E-8:44:37:21:16:61 0/1:49:19:11:8:75:25.33%:62:5.1739E-7:44:56:24:32:75 0/1:50:13:7:6:37:35.14%:44:3.404E-5:45:24:6:18:37 0/1:50:14:10:4:36:38.89%:48:1.2704E-5:43:22:13:9:36 0/1:39:20:8:12:56:35.71%:69:1.1494E-7:40:35:21:14:58 0/1:42:12:3:9:57:21.05%:38:1.2806E-4:42:45:25:20:57 0/1:46:17:11:6:55:30.91%:57:1.768E-6:41:38:24:14:57 0/1:42:14:7:7:54:25.93%:46:2.3225E-5:38:40:21:19:55 0/1:53:11:5:6:50:22%:35:2.6374E-4:41:39:19:20:51 0/1:41:9:8:1:39:23.08%:29:1.162E-3:40:30:14:16:41 0/1:47:14:7:7:47:29.79%:47:1.9604E-5:40:33:18:15:48 0/1:44:13:7:6:57:22.81%:42:5.6497E-5:40:44:19:25:59 0/1:47:23:11:12:58:39.66%:81:7.7551E-9:40:35:18:17:59 0/1:46:15:8:7:49:30.61%:50:8.6234E-6:40:34:23:11:51 0/1:45:14:5:9:53:26.42%:46:2.2741E-5:42:39:23:16:53 0/1:42:10:1:9:40:25%:32:5.1483E-4:40:30:21:9:41 0/1:52:16:8:8:49:32.65%:54:3.4048E-6:47:32:21:11:50 0/1:40:26:15:11:79:32.91%:89:1.2153E-9:38:52:31:21:83 0/1:51:17:7:10:60:28.33%:56:2.0389E-6:42:43:24:19:63 0/1:41:19:12:7:49:38.78%:66:2.1763E-7:43:30:20:10:49 0/1:47:16:7:9:47:34.04%:54:3.2755E-6:42:31:17:14:47 0/1:47:16:4:12:44:36.36%:55:2.8784E-6:41:28:16:12:44 0/1:48:12:5:7:33:36.36%:41:7.2075E-5:45:21:12:9:34 0/1:48:10:5:5:38:26.32%:33:4.9525E-4:42:28:15:13:38 0/1:52:17:10:7:53:32.08%:57:1.655E-6:47:36:17:19:54 0/1:43:10:7:3:40:25%:32:5.1483E-4:44:30:14:16:40 0/1:43:9:1:8:24:37.5%:31:7.7962E-4:45:15:10:5:24 0/1:47:21:9:12:49:42.86%:75:3.0726E-8:44:28:16:12:49 0/1:52:20:12:8:57:35.09%:69:1.2588E-7:46:37:16:21:57 0/1:50:30:14:16:77:38.96%:99:2.7365E-11:42:47:19:28:77 0/1:44:10:6:4:50:20%:32:5.9342E-4:41:40:28:12:50 MTB_anc 2867245 . A C . PASS AC=143;AF=0.477;AN=300;ANN=C|missense_variant|MODERATE|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.122A>C|p.Lys41Thr|122/663|122/663|41/220||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867245A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867245A>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:50:9:4:5:59:15.25%:28:1.4054E-3:43:50:26:24:60 0/0:60:4:2:2:28:14.29%:23:5.5746E-2:48:24:12:12:28 0/1:50:31:17:14:77:40.26%:99:1.0372E-11:43:46:22:24:77 0/1:48:10:4:6:38:26.32%:33:4.9525E-4:47:28:18:10:38 0/1:49:13:6:7:41:31.71%:44:3.9497E-5:46:28:14:14:42 0/0:52:6:4:2:28:21.43%:16:1.1603E-2:44:22:10:12:28 0/1:51:10:4:6:35:28.57%:33:4.6276E-4:49:25:11:14:36 0/1:40:8:6:2:40:20%:25:2.653E-3:46:32:12:20:41 0/1:55:15:5:10:57:26.32%:49:1.0583E-5:47:42:24:18:57 0/0:45:6:3:3:34:17.65%:23:1.2287E-2:48:28:12:16:34 0/1:44:10:5:5:40:25%:32:5.1483E-4:49:30:17:13:40 0/1:49:24:13:11:61:39.34%:84:3.5204E-9:47:37:18:19:63 0/1:52:8:4:4:53:15.09%:25:2.9389E-3:51:45:23:22:53 0/1:49:18:10:8:68:26.47%:59:1.044E-6:46:50:29:21:68 0/1:54:9:3:6:29:31.03%:30:9.4048E-4:42:20:7:13:30 0/1:52:15:5:10:47:31.91%:50:8.0864E-6:46:32:18:14:48 0/1:40:18:10:8:37:48.65%:66:2.432E-7:43:19:11:8:37 0/1:50:11:3:8:40:27.5%:36:2.2064E-4:45:29:13:16:40 0/1:49:9:5:4:26:34.62%:30:8.4928E-4:43:17:11:6:26 0/1:60:9:5:4:38:23.68%:29:1.1442E-3:49:29:16:13:38 0/1:42:11:7:4:35:31.43%:37:1.9282E-4:49:24:11:13:35 0/1:46:20:12:8:65:30.77%:67:1.6933E-7:42:45:22:23:65 0/1:49:12:8:4:37:32.43%:40:8.4418E-5:51:25:14:11:37 0/1:46:10:3:7:41:24.39%:32:5.2405E-4:45:31:19:12:42 0/1:44:13:8:5:31:41.94%:46:2.4825E-5:42:18:7:11:31 0/1:46:10:7:3:37:27.03%:33:4.8486E-4:50:27:11:16:38 0/1:48:13:5:8:31:41.94%:46:2.4825E-5:51:18:13:5:31 0/1:52:9:4:5:38:23.68%:29:1.1442E-3:51:29:14:15:38 0/1:45:17:9:8:39:43.59%:60:8.1342E-7:41:22:13:9:39 0/1:46:12:5:7:42:28.57%:40:9.7866E-5:42:30:16:14:42 0/1:50:11:3:8:35:31.43%:37:1.9282E-4:46:24:14:10:35 0/1:46:13:3:10:43:30.23%:43:4.2025E-5:46:30:15:15:43 0/1:53:10:7:3:43:23.26%:32:5.4148E-4:48:33:21:12:43 0/1:48:15:5:10:43:34.88%:51:6.9561E-6:43:28:18:10:43 0/1:49:20:13:7:51:39.22%:70:9.3266E-8:47:31:17:14:51 0/1:49:12:7:5:51:23.53%:39:1.1751E-4:45:39:16:23:52 0/1:50:13:7:6:57:22.81%:42:5.6497E-5:46:44:26:18:58 0/1:50:24:15:9:84:28.57%:80:8.7514E-9:45:60:29:31:85 0/1:49:19:8:11:63:30.16%:64:3.8563E-7:46:44:22:22:63 0/1:47:16:7:9:51:31.37%:54:3.7826E-6:42:35:19:16:51 0/1:49:13:7:6:41:31.71%:44:3.9497E-5:47:28:12:16:41 0/1:51:15:9:6:61:24.59%:49:1.1457E-5:44:46:20:26:61 0/1:52:12:2:10:33:36.36%:41:7.2075E-5:45:21:11:10:33 0/1:47:16:8:8:33:48.48%:58:1.364E-6:46:17:8:9:33 0/1:44:7:6:1:37:18.92%:22:5.721E-3:43:30:22:8:38 0/1:49:12:8:4:43:27.91%:39:1.0032E-4:42:31:17:14:44 0/1:47:11:5:6:37:29.73%:36:2.0455E-4:45:26:14:12:37 0/1:44:13:10:3:46:28.26%:43:4.5578E-5:47:33:22:11:46 0/1:47:22:11:11:41:53.66%:83:4.8137E-9:43:19:11:8:41 0/1:49:11:6:5:45:24.44%:36:2.4398E-4:49:34:14:20:46 0/0:52:6:4:2:27:22.22%:16:1.1461E-2:48:21:10:11:28 0/1:43:11:4:7:44:25%:36:2.3962E-4:46:33:16:17:45 0/1:56:12:9:3:41:29.27%:40:9.5339E-5:46:29:14:15:42 0/1:44:10:5:5:47:21.28%:32:5.7272E-4:48:37:22:15:47 0/1:47:7:1:6:31:22.58%:22:5.3469E-3:44:24:14:10:32 0/1:45:14:7:7:46:30.43%:47:1.9039E-5:44:32:14:18:47 0/1:47:17:11:6:45:37.78%:59:1.1805E-6:40:28:14:14:45 0/0:49:6:2:4:43:13.95%:36:1.2967E-2:46:37:21:16:44 0/1:50:9:5:4:42:21.43%:29:1.2112E-3:46:33:16:17:43 0/1:49:20:10:10:69:28.99%:67:1.905E-7:46:49:25:24:69 0/1:52:12:6:6:39:30.77%:40:9.0046E-5:45:27:15:12:39 0/1:46:19:10:9:48:39.58%:66:2.0555E-7:48:29:7:22:48 0/1:45:18:12:6:58:31.03%:60:8.0038E-7:44:40:23:17:58 0/1:51:12:3:9:41:29.27%:40:9.5339E-5:51:29:8:21:41 0/1:50:15:9:6:62:24.19%:49:1.1665E-5:44:47:28:19:63 0/1:49:28:13:15:84:33.33%:96:2.4842E-10:44:56:34:22:84 0/1:47:7:2:5:26:26.92%:23:4.9169E-3:45:19:9:10:26 0/1:51:20:13:7:52:38.46%:70:9.8643E-8:44:32:20:12:52 0/0:47:4:4:0:19:21.05%:13:5.251E-2:53:15:12:3:20 0/1:48:8:3:5:26:30.77%:26:2.076E-3:48:18:8:10:26 0/1:52:14:6:8:43:32.56%:47:1.727E-5:49:29:14:15:43 0/1:51:12:4:8:51:23.53%:39:1.1751E-4:50:39:18:21:53 0/0:54:4:1:3:15:26.67%:8:4.9808E-2:53:11:4:7:15 0/1:50:11:5:6:43:25.58%:36:2.3512E-4:50:32:18:14:43 0/1:45:20:12:8:50:40%:70:8.2643E-8:43:29:20:9:52 0/1:50:11:5:6:32:34.38%:37:1.7351E-4:47:21:12:9:32 0/1:49:12:5:7:37:32.43%:40:8.4418E-5:47:25:11:14:38 0/1:49:13:6:7:48:27.08%:43:4.7798E-5:48:35:22:13:48 0/1:46:16:5:11:43:37.21%:55:2.7433E-6:46:27:15:12:44 0/1:45:11:2:9:33:33.33%:37:1.8019E-4:40:22:12:10:33 0/1:38:10:3:7:27:37.04%:34:3.5253E-4:44:17:11:6:27 0/1:46:21:12:9:68:30.88%:71:7.6659E-8:41:47:18:29:68 0/1:50:14:9:5:46:30.43%:47:1.8462E-5:45:31:15:16:46 0/1:49:14:7:7:37:37.84%:48:1.3393E-5:43:23:14:9:38 0/1:46:8:4:4:34:23.53%:26:2.4562E-3:47:26:10:16:36 0/1:48:8:4:4:38:21.05%:25:2.5935E-3:41:30:15:15:39 0/1:47:15:5:10:41:36.59%:51:6.364E-6:48:26:14:12:41 0/1:46:11:5:6:32:34.38%:37:1.7351E-4:52:21:11:10:33 0/1:54:8:2:6:34:23.53%:26:2.4562E-3:46:26:5:21:34 0/1:48:11:5:6:33:33.33%:37:1.8019E-4:47:22:10:12:33 0/1:49:14:9:5:41:34.15%:47:1.6028E-5:46:27:14:13:41 0/1:52:12:4:8:30:40%:42:6.1809E-5:53:18:8:10:30 0/1:49:15:7:8:52:28.85%:50:9.3931E-6:40:37:19:18:52 0/1:45:17:9:8:50:34%:58:1.4808E-6:46:33:17:16:50 0/1:47:14:5:9:54:25.93%:46:2.3225E-5:45:40:22:18:55 0/1:44:22:17:5:38:57.89%:85:3.0605E-9:46:16:7:9:38 0/1:46:13:8:5:44:29.55%:43:4.324E-5:44:31:16:15:45 0/1:52:11:7:4:42:26.19%:36:2.3046E-4:42:31:17:14:43 0/1:40:11:4:7:37:29.73%:36:2.0455E-4:46:26:12:14:38 0/1:44:12:7:5:42:28.57%:40:9.7866E-5:45:30:19:11:42 0/1:53:11:5:6:32:34.38%:37:1.7351E-4:45:21:10:11:32 0/1:44:14:5:9:42:33.33%:47:1.6656E-5:49:28:13:15:43 0/1:43:16:9:7:49:32.65%:54:3.5325E-6:43:33:16:17:50 0/1:46:8:4:4:28:28.57%:26:2.188E-3:42:20:10:10:28 0/1:50:9:4:5:41:21.95%:29:1.1955E-3:48:32:16:16:42 0/1:50:12:4:8:38:31.58%:40:8.7276E-5:42:26:16:10:39 0/1:45:13:6:7:38:34.21%:44:3.5456E-5:48:25:14:11:39 0/1:46:15:7:8:42:35.71%:51:6.6622E-6:46:27:15:12:42 0/1:48:13:10:3:58:22.41%:42:5.7349E-5:43:45:20:25:59 0/1:48:13:4:9:43:30.23%:43:4.2025E-5:43:30:14:16:44 0/1:48:17:11:6:46:36.96%:59:1.2413E-6:46:29:14:15:47 0/1:44:13:9:4:43:30.23%:43:4.2025E-5:44:30:19:11:43 0/1:40:17:11:6:42:40.48%:60:9.9678E-7:40:25:14:11:42 0/1:45:12:6:6:41:29.27%:40:9.5339E-5:42:29:18:11:41 0/1:41:14:6:8:55:25.45%:46:2.3698E-5:40:41:25:16:56 0/1:50:14:8:6:50:28%:46:2.1224E-5:42:36:22:14:52 0/1:47:10:5:5:29:34.48%:34:3.8387E-4:39:19:12:7:30 0/1:54:17:6:11:58:29.31%:57:1.9326E-6:45:41:18:23:58 0/1:47:14:6:8:34:41.18%:49:1.1295E-5:41:20:12:8:35 0/1:41:23:11:12:60:38.33%:80:8.6933E-9:45:37:22:15:60 0/1:47:19:11:8:75:25.33%:62:5.1739E-7:43:56:24:32:75 0/1:51:13:7:6:38:34.21%:44:3.5456E-5:45:25:7:18:38 0/1:50:14:10:4:37:37.84%:48:1.3393E-5:42:23:13:10:38 0/1:39:20:8:12:58:34.48%:68:1.3135E-7:38:38:22:16:58 0/1:43:12:3:9:54:22.22%:39:1.23E-4:43:42:23:19:55 0/1:47:17:11:6:59:28.81%:57:1.9861E-6:40:42:27:15:60 0/1:42:14:7:7:53:26.42%:46:2.2741E-5:38:39:20:19:55 0/1:52:12:5:7:52:23.08%:39:1.1939E-4:41:40:19:21:52 0/1:42:10:8:2:41:24.39%:32:5.2405E-4:41:31:16:15:43 0/1:47:14:7:7:47:29.79%:47:1.9604E-5:40:33:18:15:48 0/1:44:14:8:6:57:24.56%:46:2.4613E-5:40:43:20:23:59 0/1:47:24:12:12:61:39.34%:84:3.5204E-9:40:37:19:18:61 0/1:45:17:9:8:49:34.69%:58:1.4216E-6:40:32:21:11:50 0/1:44:14:5:9:52:26.92%:46:2.2247E-5:41:38:22:16:53 0/1:42:10:1:9:41:24.39%:32:5.2405E-4:40:31:22:9:42 0/1:52:17:9:8:51:33.33%:58:1.5394E-6:46:34:22:12:51 0/1:41:27:15:12:80:33.75%:92:5.2813E-10:39:53:32:21:82 0/1:51:18:8:10:62:29.03%:60:9.0099E-7:43:44:24:20:62 0/1:42:19:12:7:49:38.78%:66:2.1763E-7:43:30:20:10:49 0/1:47:16:7:9:43:37.21%:55:2.7433E-6:43:27:13:14:47 0/1:45:16:4:12:44:36.36%:55:2.8784E-6:42:28:16:12:44 0/1:48:12:5:7:33:36.36%:41:7.2075E-5:45:21:11:10:34 0/1:49:10:5:5:38:26.32%:33:4.9525E-4:43:28:15:13:38 0/1:52:17:10:7:54:31.48%:57:1.7118E-6:46:37:17:20:55 0/1:44:10:7:3:38:26.32%:33:4.9525E-4:44:28:13:15:40 0/1:44:9:1:8:23:39.13%:31:7.4174E-4:47:14:9:5:24 0/1:47:21:9:12:48:43.75%:75:2.8521E-8:44:27:15:12:49 0/1:50:20:12:8:56:35.71%:69:1.204E-7:46:36:15:21:56 0/1:50:30:14:16:78:38.46%:99:2.8964E-11:42:48:20:28:79 0/1:42:10:6:4:51:19.61%:32:5.9987E-4:40:41:29:12:51 MTB_anc 2867251 . C G . PASS AC=142;AF=0.473;AN=300;ANN=G|missense_variant|MODERATE|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.128C>G|p.Pro43Arg|128/663|128/663|43/220||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867251C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867251C>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:49:9:4:5:59:15.25%:28:1.4054E-3:43:50:27:23:59 0/0:52:4:2:2:28:14.29%:23:5.5746E-2:47:24:13:11:28 0/1:50:30:16:14:76:39.47%:99:2.5804E-11:43:46:22:24:76 0/1:45:10:4:6:37:27.03%:33:4.8486E-4:47:27:18:9:37 0/1:47:13:6:7:42:30.95%:43:4.0777E-5:45:29:14:15:42 0/0:48:6:4:2:28:21.43%:16:1.1603E-2:47:22:9:13:29 0/1:51:10:4:6:37:27.03%:33:4.8486E-4:49:27:11:16:37 0/1:40:8:6:2:42:19.05%:25:2.7074E-3:45:34:14:20:42 0/1:54:16:6:10:55:29.09%:53:4.2614E-6:48:39:22:17:55 0/0:45:6:3:3:33:18.18%:23:1.219E-2:49:27:12:15:33 0/1:40:10:5:5:40:25%:32:5.1483E-4:50:30:17:13:40 0/1:47:24:13:11:62:38.71%:84:3.7283E-9:47:38:17:21:62 0/1:51:8:4:4:53:15.09%:25:2.9389E-3:51:45:23:22:53 0/1:48:18:10:8:70:25.71%:59:1.0894E-6:45:52:31:21:70 0/1:52:9:3:6:30:30%:30:9.678E-4:43:21:8:13:31 0/1:49:15:5:10:47:31.91%:50:8.0864E-6:46:32:17:15:47 0/1:41:16:9:7:36:44.44%:57:1.7753E-6:42:20:12:8:36 0/1:47:11:3:8:40:27.5%:36:2.2064E-4:46:29:13:16:40 0/1:48:9:5:4:29:31.03%:30:9.4048E-4:45:20:12:8:29 0/1:54:9:5:4:39:23.08%:29:1.162E-3:50:30:16:14:39 0/1:39:10:6:4:33:30.3%:33:4.3872E-4:49:23:11:12:34 0/1:46:20:12:8:65:30.77%:67:1.6933E-7:43:45:22:23:65 0/1:52:11:8:3:37:29.73%:36:2.0455E-4:51:26:15:11:38 0/1:46:10:3:7:42:23.81%:32:5.3293E-4:45:32:19:13:42 0/1:40:13:8:5:31:41.94%:46:2.4825E-5:44:18:7:11:31 0/1:46:10:7:3:37:27.03%:33:4.8486E-4:49:27:11:16:38 0/1:47:13:5:8:32:40.62%:45:2.6443E-5:50:19:13:6:32 0/1:48:9:4:5:35:25.71%:29:1.0857E-3:49:26:13:13:35 0/1:45:17:9:8:39:43.59%:60:8.1342E-7:42:22:13:9:39 0/1:46:10:4:6:43:23.26%:32:5.4148E-4:42:33:17:16:43 0/1:49:11:3:8:34:32.35%:37:1.8662E-4:48:23:14:9:34 0/1:44:13:3:10:43:30.23%:43:4.2025E-5:47:30:15:15:43 0/1:51:10:7:3:43:23.26%:32:5.4148E-4:49:33:21:12:43 0/1:46:15:5:10:42:35.71%:51:6.6622E-6:45:27:17:10:42 0/1:47:20:13:7:51:39.22%:70:9.3266E-8:45:31:16:15:51 0/1:45:12:7:5:51:23.53%:39:1.1751E-4:45:39:17:22:51 0/1:50:12:7:5:54:22.22%:39:1.2122E-4:48:41:23:18:56 0/1:49:24:15:9:85:28.24%:80:8.9857E-9:46:61:29:32:85 0/1:47:18:7:11:64:28.12%:60:9.4974E-7:46:46:23:23:64 0/1:47:16:7:9:52:30.77%:54:3.905E-6:43:36:20:16:52 0/1:48:13:7:6:43:30.23%:43:4.2025E-5:46:30:13:17:43 0/1:49:15:9:6:62:24.19%:49:1.1665E-5:45:47:19:28:63 0/1:50:12:2:10:34:35.29%:41:7.5302E-5:48:22:11:11:34 0/1:48:14:8:6:31:45.16%:50:9.1194E-6:44:17:8:9:32 0/0:46:5:5:0:34:14.71%:27:2.6693E-2:44:29:21:8:35 0/1:48:12:8:4:43:27.91%:39:1.0032E-4:43:31:17:14:43 0/1:44:11:5:6:35:31.43%:37:1.9282E-4:45:24:13:11:35 0/1:44:13:10:3:47:27.66%:43:4.6702E-5:47:34:22:12:47 0/1:45:21:11:10:41:51.22%:78:1.4682E-8:42:20:12:8:42 0/1:49:10:5:5:44:22.73%:32:5.4972E-4:48:34:14:20:46 0/0:52:6:4:2:30:20%:18:1.186E-2:47:24:11:13:30 0/1:42:10:3:7:44:22.73%:32:5.4972E-4:46:34:18:16:45 0/1:56:12:9:3:42:28.57%:40:9.7866E-5:46:30:14:16:42 0/1:44:9:4:5:46:19.57%:28:1.2682E-3:48:37:22:15:48 0/1:45:7:1:6:33:21.21%:22:5.4855E-3:45:26:15:11:34 0/1:45:14:7:7:48:29.17%:46:2.0156E-5:44:34:16:18:48 0/1:47:17:11:6:43:39.53%:59:1.0581E-6:41:26:13:13:43 0/0:50:5:1:4:41:12.2%:38:2.7465E-2:47:36:21:15:42 0/1:46:11:6:5:47:23.4%:35:2.5227E-4:45:36:18:18:48 0/1:47:20:10:10:67:29.85%:67:1.7998E-7:48:47:24:23:68 0/1:51:11:5:6:39:28.21%:36:2.1547E-4:46:28:16:12:40 0/1:45:19:10:9:48:39.58%:66:2.0555E-7:50:29:7:22:48 0/1:43:18:12:6:59:30.51%:60:8.2591E-7:44:41:23:18:59 0/1:49:12:3:9:41:29.27%:40:9.5339E-5:51:29:8:21:41 0/1:53:15:9:6:62:24.19%:49:1.1665E-5:44:47:28:19:62 0/1:48:28:13:15:82:34.15%:96:2.2922E-10:45:54:34:20:83 0/1:46:7:2:5:26:26.92%:23:4.9169E-3:45:19:9:10:26 0/1:50:19:12:7:52:36.54%:65:2.5408E-7:44:33:20:13:53 0/0:48:4:4:0:20:20%:13:5.3015E-2:52:16:13:3:21 0/1:48:7:3:4:27:25.93%:22:5.0143E-3:49:20:9:11:27 0/1:51:14:6:8:43:32.56%:47:1.727E-5:50:29:14:15:43 0/1:50:12:4:8:54:22.22%:39:1.23E-4:50:42:19:23:54 0/0:50:5:1:4:17:29.41%:8:2.2239E-2:54:12:4:8:17 0/1:49:11:5:6:43:25.58%:36:2.3512E-4:50:32:18:14:43 0/1:44:21:13:8:55:38.18%:73:4.4698E-8:43:34:24:10:55 0/1:49:11:5:6:31:35.48%:37:1.6659E-4:52:20:10:10:31 0/1:48:12:5:7:39:30.77%:40:9.0046E-5:48:27:12:15:39 0/1:49:13:6:7:46:28.26%:43:4.5578E-5:49:33:21:12:46 0/1:45:15:5:10:44:34.09%:51:7.2456E-6:45:29:17:12:44 0/1:44:11:2:9:33:33.33%:37:1.8019E-4:41:22:12:10:33 0/1:37:9:3:6:26:34.62%:30:8.4928E-4:46:17:11:6:26 0/1:44:21:12:9:65:32.31%:71:6.9273E-8:42:44:16:28:66 0/1:50:15:9:6:43:34.88%:51:6.9561E-6:46:28:13:15:44 0/1:48:15:8:7:36:41.67%:53:4.8188E-6:46:21:14:7:36 0/1:45:8:4:4:38:21.05%:25:2.5935E-3:45:30:13:17:38 0/1:45:7:3:4:37:18.92%:22:5.721E-3:42:30:14:16:37 0/1:46:15:5:10:41:36.59%:51:6.364E-6:48:26:14:12:41 0/1:45:11:5:6:34:32.35%:37:1.8662E-4:51:23:11:12:35 0/1:50:8:2:6:33:24.24%:26:2.4173E-3:45:25:5:20:33 0/1:45:11:5:6:33:33.33%:37:1.8019E-4:47:22:10:12:33 0/1:47:14:9:5:42:33.33%:47:1.6656E-5:47:28:15:13:42 0/1:46:12:4:8:32:37.5%:41:6.8751E-5:54:20:10:10:32 0/1:48:15:7:8:52:28.85%:50:9.3931E-6:41:37:18:19:53 0/1:45:17:9:8:50:34%:58:1.4808E-6:44:33:17:16:50 0/1:46:14:5:9:54:25.93%:46:2.3225E-5:46:40:22:18:54 0/1:43:22:17:5:38:57.89%:85:3.0605E-9:45:16:7:9:38 0/1:46:13:8:5:43:30.23%:43:4.2025E-5:46:30:15:15:44 0/1:49:11:7:4:45:24.44%:36:2.4398E-4:42:34:17:17:46 0/1:41:10:3:7:38:26.32%:33:4.9525E-4:43:28:14:14:39 0/1:45:11:6:5:43:25.58%:36:2.3512E-4:43:32:21:11:43 0/1:51:11:5:6:31:35.48%:37:1.6659E-4:46:20:10:10:32 0/1:44:14:5:9:42:33.33%:47:1.6656E-5:47:28:12:16:42 0/1:42:15:7:8:47:31.91%:50:8.0864E-6:43:32:16:16:48 0/1:46:7:3:4:30:23.33%:22:5.2713E-3:40:23:11:12:31 0/1:43:9:4:5:43:20.93%:29:1.2263E-3:47:34:18:16:43 0/1:48:12:4:8:39:30.77%:40:9.0046E-5:42:27:16:11:39 0/1:41:13:6:7:38:34.21%:44:3.5456E-5:48:25:14:11:39 0/1:44:15:7:8:43:34.88%:51:6.9561E-6:44:28:14:14:44 0/1:47:13:10:3:56:23.21%:42:5.5625E-5:43:43:19:24:57 0/1:47:13:4:9:44:29.55%:43:4.324E-5:44:31:15:16:44 0/1:45:18:11:7:48:37.5%:62:5.3443E-7:46:30:14:16:49 0/1:44:12:8:4:44:27.27%:39:1.027E-4:44:32:20:12:45 0/1:39:15:9:6:41:36.59%:51:6.364E-6:40:26:15:11:42 0/1:45:12:6:6:40:30%:40:9.2733E-5:42:28:17:11:40 0/1:40:14:6:8:57:24.56%:46:2.4613E-5:39:43:26:17:57 0/1:48:14:8:6:51:27.45%:46:2.1741E-5:42:37:22:15:53 0/1:43:10:5:5:29:34.48%:34:3.8387E-4:39:19:11:8:30 0/1:50:17:6:11:57:29.82%:57:1.8784E-6:47:40:18:22:57 0/1:47:14:6:8:34:41.18%:49:1.1295E-5:43:20:13:7:35 0/1:42:22:11:11:57:38.6%:77:1.9179E-8:45:35:20:15:58 0/1:47:19:11:8:76:25%:62:5.2766E-7:43:57:24:33:76 0/1:51:13:7:6:38:34.21%:44:3.5456E-5:45:25:7:18:39 0/1:49:14:10:4:39:35.9%:48:1.4735E-5:44:25:15:10:39 0/1:37:20:8:12:55:36.36%:69:1.1494E-7:40:35:20:15:57 0/1:42:12:3:9:52:23.08%:39:1.1939E-4:44:40:21:19:53 0/1:44:16:10:6:58:27.59%:53:4.6015E-6:41:42:28:14:59 0/1:41:14:7:7:53:26.42%:46:2.2741E-5:39:39:21:18:53 0/1:53:11:4:7:49:22.45%:35:2.6004E-4:41:38:17:21:51 0/1:42:9:7:2:40:22.5%:29:1.1791E-3:42:31:15:16:42 0/1:47:14:7:7:45:31.11%:47:1.8462E-5:41:31:18:13:48 0/1:44:13:8:5:56:23.21%:42:5.5625E-5:40:43:18:25:58 0/1:45:23:11:12:61:37.7%:80:9.1717E-9:41:38:21:17:62 0/1:44:16:8:8:47:34.04%:54:3.2755E-6:39:31:22:9:48 0/1:44:14:5:9:54:25.93%:46:2.3225E-5:41:40:22:18:55 0/1:41:10:1:9:38:26.32%:33:4.9525E-4:41:28:20:8:40 0/1:49:16:8:8:50:32%:54:3.5325E-6:46:33:22:11:51 0/1:40:27:15:12:80:33.75%:92:5.2813E-10:39:53:30:23:80 0/1:46:18:8:10:65:27.69%:60:9.7371E-7:44:47:24:23:66 0/1:44:18:11:7:48:37.5%:62:5.3443E-7:44:30:19:11:48 0/1:47:16:7:9:49:32.65%:54:3.5325E-6:42:33:18:15:49 0/1:44:16:4:12:44:36.36%:55:2.8784E-6:42:28:16:12:44 0/1:48:12:5:7:33:36.36%:41:7.2075E-5:47:21:11:10:33 0/1:51:10:5:5:39:25.64%:32:5.0524E-4:42:29:16:13:39 0/1:51:17:10:7:54:31.48%:57:1.7118E-6:46:37:16:21:55 0/1:42:10:7:3:39:25.64%:32:5.0524E-4:44:29:13:16:40 0/1:44:9:1:8:25:36%:30:8.1542E-4:44:16:11:5:25 0/1:46:21:9:12:48:43.75%:75:2.8521E-8:42:27:16:11:48 0/1:49:20:12:8:57:35.09%:69:1.2588E-7:46:37:15:22:57 0/1:49:29:13:16:79:36.71%:99:7.8954E-11:42:50:21:29:80 0/1:39:10:6:4:51:19.61%:32:5.9987E-4:41:41:29:12:52 MTB_anc 2867254 . A G . PASS AC=142;AF=0.473;AN=300;ANN=G|missense_variant|MODERATE|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.131A>G|p.His44Arg|131/663|131/663|44/220||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867254A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867254A>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:51:8:3:5:59:13.56%:25:3.0313E-3:43:51:28:23:60 0/0:51:4:2:2:26:15.38%:20:5.5222E-2:48:22:11:11:27 0/1:49:30:16:14:76:39.47%:99:2.5804E-11:42:46:22:24:76 0/1:44:10:4:6:36:27.78%:33:4.7404E-4:48:26:18:8:36 0/1:45:13:6:7:43:30.23%:43:4.2025E-5:43:30:14:16:43 0/0:47:6:4:2:30:20%:18:1.186E-2:46:24:10:14:30 0/1:51:10:4:6:36:27.78%:33:4.7404E-4:48:26:11:15:36 0/1:39:8:6:2:42:19.05%:25:2.7074E-3:45:34:15:19:43 0/1:54:15:5:10:55:27.27%:49:1.0121E-5:47:40:23:17:55 0/0:43:6:3:3:33:18.18%:23:1.219E-2:50:27:12:15:33 0/1:41:10:5:5:42:23.81%:32:5.3293E-4:48:32:18:14:42 0/1:46:22:12:10:60:36.67%:76:2.242E-8:46:38:17:21:62 0/1:48:8:4:4:53:15.09%:25:2.9389E-3:50:45:23:22:53 0/1:48:18:10:8:68:26.47%:59:1.044E-6:45:50:31:19:69 0/1:51:9:3:6:30:30%:30:9.678E-4:43:21:8:13:31 0/1:48:15:5:10:46:32.61%:51:7.8109E-6:47:31:16:15:46 0/1:42:15:8:7:35:42.86%:53:4.5018E-6:41:20:12:8:36 0/1:48:11:3:8:40:27.5%:36:2.2064E-4:45:29:13:16:40 0/1:50:9:5:4:29:31.03%:30:9.4048E-4:43:20:12:8:29 0/1:55:9:5:4:39:23.08%:29:1.162E-3:50:30:16:14:39 0/1:38:11:7:4:33:33.33%:37:1.8019E-4:48:22:11:11:33 0/1:46:20:12:8:63:31.75%:67:1.5858E-7:42:43:22:21:64 0/1:49:12:8:4:37:32.43%:40:8.4418E-5:50:25:15:10:37 0/1:46:10:3:7:40:25%:32:5.1483E-4:45:30:18:12:42 0/1:40:13:8:5:30:43.33%:46:2.3178E-5:45:17:6:11:30 0/1:45:10:7:3:36:27.78%:33:4.7404E-4:50:26:11:15:37 0/1:48:13:5:8:31:41.94%:46:2.4825E-5:48:18:12:6:31 0/1:49:9:4:5:34:26.47%:29:1.0644E-3:51:25:12:13:34 0/1:46:16:8:8:38:42.11%:57:1.9143E-6:41:21:13:8:38 0/1:46:10:4:6:42:23.81%:32:5.3293E-4:41:32:18:14:44 0/1:48:11:3:8:35:31.43%:37:1.9282E-4:46:24:15:9:35 0/1:44:13:3:10:43:30.23%:43:4.2025E-5:46:30:15:15:43 0/1:51:10:7:3:43:23.26%:32:5.4148E-4:47:33:21:12:43 0/1:44:15:5:10:41:36.59%:51:6.364E-6:44:26:16:10:42 0/1:47:20:13:7:50:40%:70:8.793E-8:46:30:15:15:50 0/1:46:12:7:5:51:23.53%:39:1.1751E-4:45:39:17:22:51 0/1:49:13:7:6:52:25%:42:5.1909E-5:48:39:22:17:53 0/1:50:24:15:9:83:28.92%:80:8.5168E-9:45:59:28:31:85 0/1:48:17:6:11:65:26.15%:56:2.2923E-6:45:48:24:24:66 0/1:47:16:7:9:52:30.77%:54:3.905E-6:43:36:20:16:53 0/1:49:13:7:6:42:30.95%:43:4.0777E-5:46:29:13:16:43 0/1:49:15:9:6:62:24.19%:49:1.1665E-5:44:47:19:28:64 0/1:49:12:2:10:33:36.36%:41:7.2075E-5:47:21:11:10:33 0/1:47:15:8:7:32:46.88%:54:3.5464E-6:44:17:8:9:32 0/0:49:4:4:0:34:11.76%:32:5.6777E-2:44:29:21:8:36 0/1:51:11:7:4:41:26.83%:36:2.2563E-4:41:30:16:14:42 0/1:48:11:5:6:36:30.56%:37:1.9879E-4:43:25:13:12:36 0/1:44:13:10:3:45:28.89%:43:4.4424E-5:47:32:22:10:46 0/1:46:21:11:10:44:47.73%:76:2.0219E-8:41:23:14:9:46 0/1:48:11:6:5:46:23.91%:36:2.4819E-4:47:35:14:21:47 0/0:48:6:4:2:30:20%:18:1.186E-2:47:24:11:13:30 0/1:42:11:4:7:44:25%:36:2.3962E-4:47:33:19:14:45 0/1:55:12:9:3:40:30%:40:9.2733E-5:46:28:14:14:42 0/1:45:9:4:5:46:19.57%:28:1.2682E-3:47:37:22:15:48 0/1:47:7:1:6:34:20.59%:22:5.5492E-3:44:27:15:12:34 0/1:44:13:6:7:46:28.26%:43:4.5578E-5:43:33:15:18:47 0/1:45:17:11:6:44:38.64%:59:1.1194E-6:39:27:13:14:44 0/0:50:5:1:4:42:11.9%:38:2.7555E-2:46:37:22:15:42 0/1:46:11:6:5:49:22.45%:35:2.6004E-4:43:38:20:18:49 0/1:49:20:10:10:69:28.99%:67:1.905E-7:47:49:25:24:69 0/1:51:11:5:6:39:28.21%:36:2.1547E-4:47:28:17:11:41 0/1:46:18:10:8:47:38.3%:62:5.072E-7:49:29:7:22:48 0/1:43:18:12:6:57:31.58%:61:7.7462E-7:43:39:22:17:59 0/1:49:11:2:9:41:26.83%:36:2.2563E-4:50:30:9:21:42 0/1:51:15:9:6:60:25%:49:1.1245E-5:43:45:28:17:61 0/1:45:28:13:15:82:34.15%:96:2.2922E-10:45:54:34:20:83 0/1:46:7:2:5:25:28%:23:4.8126E-3:45:18:9:9:26 0/1:48:20:13:7:53:37.74%:69:1.0405E-7:44:33:20:13:53 0/0:52:3:3:0:19:15.79%:17:1.1486E-1:51:16:13:3:21 0/1:50:7:3:4:28:25%:22:5.1054E-3:48:21:9:12:28 0/1:51:14:6:8:43:32.56%:47:1.727E-5:50:29:14:15:43 0/1:47:12:4:8:52:23.08%:39:1.1939E-4:50:40:18:22:53 0/0:50:5:1:4:17:29.41%:8:2.2239E-2:54:12:5:7:17 0/1:50:11:5:6:41:26.83%:36:2.2563E-4:50:30:16:14:43 0/1:45:20:12:8:53:37.74%:69:1.0405E-7:43:33:23:10:54 0/1:47:11:5:6:31:35.48%:37:1.6659E-4:51:20:10:10:31 0/1:48:12:5:7:39:30.77%:40:9.0046E-5:47:27:12:15:40 0/1:52:11:4:7:44:25%:36:2.3962E-4:46:33:21:12:46 0/1:45:14:5:9:43:32.56%:47:1.727E-5:45:29:17:12:43 0/1:46:11:2:9:33:33.33%:37:1.8019E-4:41:22:12:10:33 0/1:37:8:3:5:25:32%:26:2.0146E-3:46:17:10:7:27 0/1:44:20:11:9:65:30.77%:67:1.6933E-7:41:45:17:28:66 0/1:50:15:9:6:45:33.33%:51:7.5306E-6:45:30:15:15:45 0/1:48:15:8:7:36:41.67%:53:4.8188E-6:45:21:14:7:36 0/1:42:8:4:4:38:21.05%:25:2.5935E-3:44:30:14:16:38 0/1:46:7:3:4:36:19.44%:22:5.6667E-3:43:29:13:16:36 0/1:44:14:4:10:39:35.9%:48:1.4735E-5:49:25:13:12:40 0/1:45:11:5:6:34:32.35%:37:1.8662E-4:51:23:10:13:35 0/1:50:8:2:6:32:25%:26:2.3764E-3:45:24:5:19:33 0/1:44:11:5:6:33:33.33%:37:1.8019E-4:46:22:10:12:33 0/1:46:14:9:5:42:33.33%:47:1.6656E-5:47:28:15:13:42 0/1:47:12:4:8:32:37.5%:41:6.8751E-5:54:20:10:10:32 0/1:49:15:7:8:53:28.3%:50:9.6403E-6:39:38:19:19:54 0/1:45:16:8:8:48:33.33%:54:3.4048E-6:45:32:16:16:49 0/1:47:14:5:9:54:25.93%:46:2.3225E-5:46:40:22:18:54 0/1:41:22:17:5:38:57.89%:85:3.0605E-9:43:16:7:9:39 0/1:46:13:8:5:41:31.71%:44:3.9497E-5:45:28:15:13:42 0/1:50:11:7:4:45:24.44%:36:2.4398E-4:42:34:17:17:46 0/1:41:11:4:7:36:30.56%:37:1.9879E-4:44:25:13:12:38 0/1:46:11:6:5:42:26.19%:36:2.3046E-4:43:31:21:10:43 0/1:48:11:5:6:33:33.33%:37:1.8019E-4:44:22:10:12:34 0/1:44:14:5:9:41:34.15%:47:1.6028E-5:48:27:12:15:42 0/1:41:15:7:8:45:33.33%:51:7.5306E-6:43:30:15:15:46 0/1:39:8:4:4:32:25%:26:2.3764E-3:39:24:11:13:33 0/1:44:9:4:5:41:21.95%:29:1.1955E-3:47:32:18:14:42 0/1:46:12:4:8:39:30.77%:40:9.0046E-5:42:27:16:11:40 0/1:42:12:5:7:37:32.43%:40:8.4418E-5:47:25:13:12:40 0/1:43:15:7:8:44:34.09%:51:7.2456E-6:44:29:15:14:44 0/1:48:13:10:3:56:23.21%:42:5.5625E-5:43:43:19:24:58 0/1:46:13:4:9:44:29.55%:43:4.324E-5:44:31:15:16:44 0/1:44:18:11:7:49:36.73%:62:5.6162E-7:44:31:15:16:49 0/1:42:13:9:4:45:28.89%:43:4.4424E-5:43:32:20:12:45 0/1:38:14:8:6:41:34.15%:47:1.6028E-5:38:27:15:12:43 0/1:45:12:6:6:37:32.43%:40:8.4418E-5:42:25:16:9:38 0/1:41:14:6:8:56:25%:46:2.416E-5:37:42:26:16:57 0/1:48:14:8:6:52:26.92%:46:2.2247E-5:41:38:24:14:54 0/1:39:11:5:6:31:35.48%:37:1.6659E-4:38:20:12:8:32 0/1:47:17:6:11:58:29.31%:57:1.9326E-6:45:41:18:23:59 0/1:46:14:6:8:35:40%:49:1.2005E-5:42:21:14:7:36 0/1:42:22:11:11:59:37.29%:76:2.133E-8:43:37:22:15:59 0/1:48:19:11:8:73:26.03%:63:4.9649E-7:44:54:23:31:74 0/1:50:14:7:7:40:35%:48:1.5388E-5:43:26:8:18:40 0/1:50:14:10:4:38:36.84%:48:1.407E-5:41:24:14:10:39 0/1:39:19:7:12:56:33.93%:65:3.0264E-7:40:37:22:15:57 0/1:43:12:3:9:54:22.22%:39:1.23E-4:43:42:23:19:55 0/1:43:17:11:6:61:27.87%:56:2.091E-6:39:44:28:16:62 0/1:44:10:3:7:51:19.61%:32:5.9987E-4:38:41:23:18:56 0/1:54:11:4:7:50:22%:35:2.6374E-4:40:39:19:20:51 0/1:42:8:6:2:40:20%:25:2.653E-3:41:32:16:16:43 0/1:46:14:7:7:47:29.79%:47:1.9604E-5:39:33:19:14:49 0/1:45:11:6:5:53:20.75%:35:2.7419E-4:40:42:19:23:58 0/1:43:23:11:12:60:38.33%:80:8.6933E-9:40:37:20:17:62 0/1:42:16:8:8:48:33.33%:54:3.4048E-6:38:32:24:8:49 0/1:44:14:5:9:54:25.93%:46:2.3225E-5:39:40:22:18:55 0/1:42:10:1:9:40:25%:32:5.1483E-4:40:30:22:8:40 0/1:48:17:9:8:50:34%:58:1.4808E-6:45:33:21:12:52 0/1:40:27:15:12:76:35.53%:93:4.4502E-10:38:49:28:21:78 0/1:45:18:8:10:65:27.69%:60:9.7371E-7:43:47:25:22:67 0/1:42:17:11:6:47:36.17%:58:1.3018E-6:42:30:19:11:48 0/1:44:16:7:9:49:32.65%:54:3.5325E-6:40:33:18:15:49 0/1:44:15:3:12:42:35.71%:51:6.6622E-6:42:27:15:12:44 0/1:48:12:5:7:32:37.5%:41:6.8751E-5:46:20:10:10:33 0/1:51:10:5:5:38:26.32%:33:4.9525E-4:42:28:15:13:39 0/1:50:17:10:7:52:32.69%:57:1.5975E-6:45:35:15:20:54 0/1:43:9:6:3:38:23.68%:29:1.1442E-3:42:29:14:15:40 0/1:44:9:1:8:24:37.5%:31:7.7962E-4:43:15:11:4:24 0/1:46:21:9:12:49:42.86%:75:3.0726E-8:43:28:17:11:49 0/1:49:20:12:8:57:35.09%:69:1.2588E-7:45:37:15:22:57 0/1:49:29:14:15:79:36.71%:99:7.8954E-11:42:50:21:29:80 0/1:36:10:6:4:50:20%:32:5.9342E-4:42:40:28:12:54 MTB_anc 2867263 . G A . PASS AC=140;AF=0.467;AN=300;ANN=A|missense_variant|MODERATE|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.140G>A|p.Gly47Asp|140/663|140/663|47/220||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867263G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867263G>A||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:46:9:4:5:61:14.75%:28:1.4219E-3:43:52:29:23:61 0/0:48:4:2:2:29:13.79%:26:5.5981E-2:48:25:11:14:30 0/1:49:30:16:14:74:40.54%:99:2.2803E-11:42:44:21:23:74 0/1:43:10:4:6:38:26.32%:33:4.9525E-4:47:28:19:9:38 0/1:45:13:6:7:42:30.95%:43:4.0777E-5:44:29:13:16:43 0/0:48:6:4:2:29:20.69%:18:1.1736E-2:47:23:10:13:29 0/1:50:10:4:6:36:27.78%:33:4.7404E-4:49:26:11:15:36 0/1:40:8:6:2:41:19.51%:25:2.6808E-3:45:33:14:19:42 0/1:49:15:5:10:55:27.27%:49:1.0121E-5:47:40:22:18:55 0/0:40:6:3:3:33:18.18%:23:1.219E-2:49:27:11:16:33 0/1:40:10:5:5:40:25%:32:5.1483E-4:48:30:16:14:41 0/1:45:23:12:11:62:37.1%:80:9.6554E-9:46:39:18:21:64 0/1:48:8:4:4:50:16%:25:2.8851E-3:51:42:22:20:50 0/1:48:18:10:8:68:26.47%:59:1.044E-6:46:50:30:20:68 0/1:52:9:3:6:28:32.14%:30:9.1169E-4:44:19:8:11:29 0/1:46:15:5:10:45:33.33%:51:7.5306E-6:47:30:16:14:47 0/1:41:14:8:6:34:41.18%:49:1.1295E-5:44:20:11:9:36 0/1:47:11:3:8:39:28.21%:36:2.1547E-4:48:28:13:15:39 0/1:46:9:5:4:30:30%:30:9.678E-4:42:21:12:9:31 0/1:55:9:5:4:39:23.08%:29:1.162E-3:50:30:16:14:39 0/1:39:11:7:4:33:33.33%:37:1.8019E-4:49:22:11:11:35 0/1:44:20:12:8:59:33.9%:68:1.3682E-7:44:39:19:20:61 0/1:51:11:7:4:36:30.56%:37:1.9879E-4:49:25:15:10:36 0/1:44:10:3:7:43:23.26%:32:5.4148E-4:45:33:19:14:43 0/1:40:11:7:4:31:35.48%:37:1.6659E-4:43:20:7:13:31 0/1:44:8:6:2:35:22.86%:26:2.4931E-3:50:27:11:16:37 0/1:46:13:5:8:31:41.94%:46:2.4825E-5:49:18:12:6:31 0/1:50:8:4:4:33:24.24%:26:2.4173E-3:52:25:12:13:33 0/1:44:18:9:9:40:45%:64:3.1919E-7:41:22:14:8:40 0/1:44:10:4:6:42:23.81%:32:5.3293E-4:42:32:16:16:43 0/1:47:10:3:7:36:27.78%:33:4.7404E-4:45:26:15:11:36 0/1:42:12:3:9:43:27.91%:39:1.0032E-4:44:31:17:14:44 0/1:48:10:7:3:41:24.39%:32:5.2405E-4:47:31:19:12:42 0/1:44:14:4:10:41:34.15%:47:1.6028E-5:44:27:16:11:42 0/1:47:19:12:7:49:38.78%:66:2.1763E-7:46:30:16:14:49 0/1:43:10:6:4:48:20.83%:32:5.7985E-4:45:38:17:21:48 0/1:46:13:7:6:54:24.07%:42:5.3813E-5:46:41:22:19:54 0/1:49:23:14:9:81:28.4%:77:1.9285E-8:45:58:27:31:83 0/1:47:18:7:11:69:26.09%:59:1.0668E-6:45:51:26:25:69 0/1:46:16:7:9:54:29.63%:53:4.1444E-6:43:38:22:16:55 0/1:49:13:7:6:42:30.95%:43:4.0777E-5:45:29:12:17:42 0/1:46:14:8:6:61:22.95%:45:2.6327E-5:44:47:19:28:61 0/1:51:12:2:10:33:36.36%:41:7.2075E-5:46:21:12:9:33 0/1:48:13:8:5:31:41.94%:46:2.4825E-5:42:18:9:9:32 0/0:49:4:4:0:34:11.76%:31:5.6946E-2:41:30:21:9:34 0/1:52:11:7:4:42:26.19%:36:2.3046E-4:42:31:17:14:42 0/1:47:11:5:6:37:29.73%:36:2.0455E-4:44:26:13:13:38 0/1:44:13:10:3:44:29.55%:43:4.324E-5:46:31:22:9:45 0/1:45:21:10:11:50:42%:74:3.2974E-8:40:29:18:11:51 0/1:50:10:5:5:45:22.22%:32:5.5766E-4:48:35:14:21:47 0/0:45:6:4:2:28:21.43%:16:1.1603E-2:46:22:10:12:28 0/1:41:9:3:6:41:21.95%:29:1.1955E-3:48:32:18:14:43 0/1:53:12:9:3:43:27.91%:40:9.7866E-5:46:30:14:16:44 0/1:45:10:5:5:44:22.73%:32:5.4972E-4:47:34:20:14:46 0/0:49:6:1:5:33:18.18%:23:1.219E-2:45:27:15:12:33 0/1:44:12:5:7:47:25.53%:39:1.0942E-4:43:35:17:18:47 0/1:45:16:10:6:41:39.02%:56:2.4696E-6:41:25:11:14:43 0/0:49:5:1:4:41:12.2%:38:2.7465E-2:46:36:21:15:43 0/1:45:10:5:5:47:21.28%:32:5.7272E-4:44:37:17:20:48 0/1:46:20:10:10:69:28.99%:67:1.905E-7:47:49:25:24:69 0/1:48:12:6:6:42:28.57%:40:9.7866E-5:46:30:17:13:42 0/1:43:19:10:9:50:38%:66:2.2975E-7:49:31:7:24:50 0/1:42:17:11:6:56:30.36%:57:1.8236E-6:43:39:22:17:57 0/1:48:12:3:9:41:29.27%:40:9.5339E-5:50:29:9:20:41 0/1:51:15:9:6:61:24.59%:49:1.1245E-5:44:45:29:16:61 0/1:46:28:13:15:81:34.57%:96:2.1978E-10:45:53:32:21:82 0/1:46:7:2:5:25:28%:23:4.8126E-3:45:18:9:9:25 0/1:48:20:13:7:51:39.22%:70:9.3266E-8:45:31:19:12:51 0/0:47:4:4:0:20:20%:13:5.3015E-2:48:16:12:4:21 0/1:45:8:4:4:26:30.77%:26:2.076E-3:51:18:7:11:26 0/1:47:15:6:9:42:35.71%:51:6.6622E-6:50:27:14:13:42 0/1:45:12:4:8:51:23.53%:39:1.1751E-4:51:39:17:22:52 0/0:52:4:1:3:16:25%:8:5.0612E-2:53:12:5:7:16 0/1:48:10:5:5:42:23.81%:32:5.3293E-4:50:32:17:15:44 0/1:42:19:12:7:53:35.85%:65:2.6625E-7:41:34:24:10:53 0/1:47:11:5:6:30:36.67%:37:1.594E-4:50:19:10:9:30 0/1:46:11:5:6:38:28.95%:36:2.1011E-4:47:27:11:16:38 0/1:51:13:6:7:47:27.66%:43:4.6702E-5:47:34:22:12:47 0/1:45:14:5:9:43:32.56%:47:1.727E-5:45:29:17:12:44 0/1:43:11:2:9:32:34.38%:37:1.7351E-4:42:21:12:9:32 0/1:36:9:3:6:28:32.14%:30:9.1169E-4:44:19:12:7:28 0/1:42:21:12:9:63:33.33%:71:6.4328E-8:41:42:14:28:66 0/1:48:14:7:7:45:31.11%:47:1.8462E-5:45:31:16:15:45 0/1:48:13:6:7:34:38.24%:45:2.9583E-5:46:21:14:7:35 0/1:41:8:4:4:36:22.22%:25:2.5282E-3:48:28:12:16:38 0/0:44:6:2:4:36:16.67%:25:1.2467E-2:45:30:14:16:36 0/1:41:15:5:10:41:36.59%:51:6.364E-6:48:26:13:13:41 0/1:44:11:5:6:37:29.73%:36:2.0455E-4:49:26:13:13:37 0/1:45:8:2:6:31:25.81%:26:2.3332E-3:48:23:5:18:31 0/1:42:11:5:6:33:33.33%:37:1.8019E-4:47:22:10:12:33 0/1:45:14:9:5:42:33.33%:47:1.6028E-5:47:27:14:13:42 0/1:46:12:4:8:32:37.5%:41:6.8751E-5:55:20:10:10:32 0/1:47:13:7:6:50:26%:43:4.9906E-5:41:37:18:19:50 0/1:46:17:9:8:47:36.17%:58:1.3018E-6:44:30:15:15:48 0/1:44:14:5:9:53:26.42%:46:2.2741E-5:47:39:22:17:53 0/1:42:21:16:5:38:55.26%:80:9.9016E-9:42:17:7:10:38 0/1:45:14:9:5:41:34.15%:47:1.6028E-5:46:27:14:13:42 0/1:47:11:7:4:41:26.83%:36:2.2563E-4:43:30:14:16:44 0/1:39:11:4:7:37:29.73%:36:2.0455E-4:44:26:14:12:39 0/1:45:11:6:5:44:25%:36:2.3962E-4:43:33:21:12:45 0/1:44:11:5:6:30:36.67%:37:1.594E-4:46:19:8:11:31 0/1:43:14:5:9:42:33.33%:47:1.6656E-5:47:28:12:16:42 0/1:43:16:8:8:46:34.78%:55:3.1446E-6:43:30:15:15:46 0/1:39:8:4:4:31:25.81%:26:2.3332E-3:39:23:10:13:33 0/1:43:9:4:5:41:21.95%:29:1.1955E-3:47:32:18:14:41 0/1:44:12:4:8:38:31.58%:40:8.7276E-5:43:26:16:10:39 0/1:43:11:4:7:36:30.56%:37:1.9879E-4:45:25:12:13:37 0/1:39:16:8:8:45:35.56%:55:3.0122E-6:45:29:16:13:48 0/1:47:13:10:3:54:24.07%:42:5.3813E-5:43:41:20:21:57 0/1:44:12:4:8:45:26.67%:39:1.05E-4:43:33:17:16:45 0/1:43:18:11:7:50:36%:62:5.8874E-7:45:32:16:16:50 0/1:41:12:8:4:43:27.91%:39:1.0032E-4:44:31:19:12:44 0/1:40:15:9:6:42:35.71%:51:6.6622E-6:38:27:14:13:42 0/1:45:12:6:6:38:31.58%:40:8.7276E-5:42:26:17:9:38 0/1:41:14:6:8:54:25.93%:46:2.3225E-5:38:40:24:16:54 0/1:47:14:8:6:49:28.57%:46:2.0696E-5:41:35:21:14:53 0/1:36:11:5:6:29:37.93%:38:1.5195E-4:38:18:11:7:30 0/1:45:17:6:11:57:29.82%:57:1.8784E-6:47:40:18:22:57 0/1:47:14:6:8:36:38.89%:48:1.2704E-5:40:22:14:8:36 0/1:42:22:11:11:59:37.29%:76:2.133E-8:43:37:21:16:59 0/1:47:19:11:8:73:26.03%:63:4.9649E-7:43:54:22:32:73 0/1:48:14:7:7:41:34.15%:47:1.6028E-5:44:27:8:19:41 0/1:47:14:10:4:39:35.9%:48:1.4735E-5:43:25:15:10:39 0/1:38:20:8:12:57:35.09%:69:1.2588E-7:39:37:23:14:59 0/1:40:12:3:9:55:21.82%:39:1.2473E-4:42:43:23:20:57 0/1:43:16:10:6:60:26.67%:53:4.8192E-6:39:44:28:16:62 0/1:41:14:7:7:59:23.73%:45:2.5488E-5:37:45:23:22:61 0/1:53:11:4:7:48:22.92%:35:2.5621E-4:41:37:17:20:51 0/1:42:9:7:2:42:21.43%:29:1.2112E-3:43:33:17:16:43 0/1:45:15:8:7:49:30.61%:50:8.6234E-6:40:34:19:15:51 0/1:41:14:8:6:55:25.45%:46:2.3698E-5:41:41:18:23:57 0/1:42:23:11:12:61:37.7%:80:9.1717E-9:40:38:21:17:62 0/1:40:16:8:8:46:34.78%:55:3.1446E-6:38:30:21:9:48 0/1:45:13:4:9:52:25%:42:5.1909E-5:41:39:20:19:55 0/1:41:10:1:9:37:27.03%:33:4.8486E-4:40:27:19:8:40 0/1:45:17:9:8:54:31.48%:57:1.7118E-6:43:37:22:15:54 0/1:39:25:14:11:73:34.25%:86:2.4806E-9:39:48:27:21:77 0/1:45:17:8:9:67:25.37%:56:2.3887E-6:44:50:26:24:67 0/1:43:18:11:7:51:35.29%:62:6.1577E-7:39:33:21:12:51 0/1:46:16:7:9:49:32.65%:54:3.5325E-6:41:33:19:14:49 0/1:43:16:4:12:42:38.1%:55:2.607E-6:45:26:14:12:42 0/1:46:12:5:7:33:36.36%:41:7.2075E-5:44:21:10:11:34 0/1:51:10:5:5:39:25.64%:32:5.0524E-4:42:29:16:13:41 0/1:47:17:10:7:55:30.91%:57:1.768E-6:45:38:16:22:56 0/1:43:10:7:3:41:24.39%:32:5.2405E-4:41:31:13:18:42 0/1:40:9:0:9:22:40.91%:31:7.0165E-4:43:13:9:4:25 0/1:46:21:9:12:49:42.86%:75:3.0726E-8:42:28:16:12:50 0/1:48:20:12:8:57:35.09%:69:1.204E-7:47:36:15:21:57 0/1:45:30:14:16:82:36.59%:99:3.5731E-11:42:52:22:30:82 0/1:36:11:6:5:51:21.57%:35:2.6733E-4:42:40:27:13:56 MTB_anc 2867298 . C A . PASS AC=128;AF=0.427;AN=300;ANN=A|missense_variant|MODERATE|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.175C>A|p.His59Asn|175/663|175/663|59/220||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867298C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867298C>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:47:4:1:3:54:7.41%:62:5.9012E-2:43:50:28:22:54 0/0:38:4:2:2:32:12.5%:29:5.6596E-2:49:28:13:15:32 0/1:47:25:15:10:66:37.88%:87:1.7848E-9:44:41:19:22:66 0/1:44:7:2:5:38:18.42%:22:5.7727E-3:48:31:19:12:38 0/1:45:12:6:6:37:32.43%:40:8.4418E-5:42:25:12:13:39 0/0:45:6:4:2:36:16.67%:25:1.2467E-2:48:30:13:17:36 0/1:47:10:4:6:37:27.03%:33:4.8486E-4:47:27:12:15:37 0/0:37:6:5:1:35:17.14%:25:1.238E-2:44:29:13:16:37 0/1:46:13:4:9:62:20.97%:42:6.0557E-5:46:49:30:19:62 0/0:60:1:1:0:27:3.7%:41:5E-1:47:26:11:15:27 0/1:37:8:3:5:41:19.51%:25:2.6808E-3:48:33:21:12:41 0/1:42:22:13:9:68:32.35%:75:3.133E-8:46:46:20:26:68 0/1:46:7:4:3:42:16.67%:22:5.9563E-3:48:35:18:17:42 0/1:44:16:9:7:67:23.88%:52:5.5268E-6:46:51:33:18:68 0/0:48:6:2:4:31:19.35%:20:1.1977E-2:43:25:11:14:31 0/1:42:13:4:9:43:30.23%:43:4.2025E-5:46:30:17:13:45 0/1:43:12:7:5:35:34.29%:41:7.8434E-5:47:23:13:10:35 0/1:43:8:2:6:33:24.24%:26:2.4173E-3:47:25:10:15:33 0/1:40:8:4:4:35:22.86%:26:2.4931E-3:45:27:16:11:35 0/1:52:9:5:4:34:26.47%:29:1.0644E-3:50:25:13:12:34 0/1:42:10:6:4:32:31.25%:33:4.259E-4:48:22:9:13:33 0/1:44:14:10:4:54:25.93%:46:2.3225E-5:45:40:22:18:55 0/1:52:9:6:3:33:27.27%:29:1.042E-3:48:24:15:9:35 0/1:40:7:2:5:38:18.42%:22:5.7727E-3:44:31:17:14:38 0/1:42:10:6:4:29:34.48%:34:3.8387E-4:48:19:6:13:29 0/1:43:8:5:3:37:21.62%:25:2.5617E-3:50:29:13:16:37 0/1:48:10:4:6:30:33.33%:33:3.9851E-4:48:20:14:6:30 0/1:42:7:4:3:32:21.88%:22:5.4182E-3:52:25:12:13:32 0/1:43:12:5:7:36:33.33%:40:8.1472E-5:44:24:14:10:36 0/1:43:7:4:3:40:17.5%:22:5.8688E-3:42:33:18:15:41 0/1:39:8:3:5:37:21.62%:25:2.5617E-3:45:29:17:12:37 0/1:43:9:3:6:41:21.95%:29:1.1955E-3:46:32:17:15:41 0/1:39:10:6:4:42:23.81%:32:5.3293E-4:46:32:19:13:42 0/1:43:13:3:10:41:31.71%:44:3.9497E-5:47:28:15:13:41 0/1:45:16:11:5:48:33.33%:54:3.4048E-6:43:32:18:14:48 0/1:41:10:7:3:45:22.22%:32:5.5766E-4:49:35:16:19:46 0/1:44:11:6:5:53:20.75%:35:2.7419E-4:46:42:25:17:54 0/1:47:19:13:6:82:23.17%:62:5.8701E-7:45:63:31:32:83 0/1:44:16:6:10:71:22.54%:52:5.8954E-6:45:55:27:28:72 0/1:43:13:5:8:48:27.08%:43:4.7798E-5:47:35:19:16:50 0/1:43:9:6:3:37:24.32%:29:1.1256E-3:44:28:12:16:37 0/1:50:7:4:3:52:13.46%:22:6.2977E-3:46:45:18:27:53 0/1:49:10:1:9:34:29.41%:33:4.51E-4:44:24:14:10:35 0/1:46:8:5:3:25:32%:26:2.0146E-3:47:17:7:10:26 0/0:45:3:3:0:33:9.09%:37:1.1923E-1:45:30:17:13:33 0/1:52:12:7:5:39:30.77%:40:9.0046E-5:46:27:13:14:40 0/1:43:8:5:3:33:24.24%:26:2.4173E-3:42:25:11:14:34 0/1:41:10:7:3:48:20.83%:32:5.7985E-4:43:38:24:14:48 0/1:46:15:9:6:44:34.09%:51:7.2456E-6:41:29:19:10:44 0/0:51:5:3:2:39:12.82%:35:2.7273E-2:48:34:16:18:39 0/0:42:4:4:0:24:16.67%:18:5.461E-2:45:20:9:11:24 0/1:37:8:3:5:42:19.05%:25:2.7074E-3:48:34:20:14:43 0/1:48:11:8:3:41:26.83%:36:2.2563E-4:45:30:16:14:41 0/0:45:6:2:4:39:15.38%:31:1.2702E-2:46:33:19:14:41 0/0:38:5:1:4:27:18.52%:19:2.5527E-2:45:22:13:9:28 0/1:45:11:5:6:51:21.57%:35:2.6733E-4:43:40:18:22:51 0/1:44:14:9:5:43:32.56%:47:1.727E-5:43:29:12:17:44 0/0:60:3:0:3:42:7.14%:49:1.2048E-1:46:39:23:16:42 0/1:47:9:3:6:47:19.15%:28:1.2811E-3:46:38:18:20:48 0/1:40:18:9:9:61:29.51%:60:8.7622E-7:49:43:22:21:62 0/1:42:9:3:6:39:23.08%:29:1.162E-3:47:30:18:12:41 0/1:42:15:8:7:46:32.61%:51:7.8109E-6:48:31:9:22:47 0/1:43:13:8:5:47:27.66%:43:4.6702E-5:46:34:20:14:47 0/1:47:9:2:7:36:25%:29:1.1061E-3:52:27:8:19:37 0/1:43:11:6:5:54:20.37%:35:2.7747E-4:45:43:27:16:55 0/1:46:20:9:11:69:28.99%:67:1.905E-7:45:49:27:22:69 0/0:52:3:1:2:22:13.64%:19:1.1628E-1:49:19:8:11:23 0/1:45:16:12:4:48:33.33%:54:3.4048E-6:47:32:19:13:48 0/0:52:3:3:0:20:15%:16:1.1538E-1:49:17:10:7:20 0/0:45:6:3:3:29:20.69%:18:1.1736E-2:51:23:10:13:29 0/1:44:11:4:7:38:28.95%:36:2.1011E-4:48:27:15:12:40 0/1:43:11:4:7:49:22.45%:35:2.6004E-4:51:38:15:23:49 0/0:52:3:1:2:13:23.08%:9:1.1E-1:55:10:5:5:13 0/1:49:7:4:3:40:17.5%:22:5.8688E-3:52:33:17:16:41 0/1:44:13:9:4:44:29.55%:43:4.324E-5:43:31:21:10:44 0/1:49:10:4:6:29:34.48%:34:3.8387E-4:45:19:9:10:30 0/1:42:9:4:5:43:20.93%:29:1.2263E-3:48:34:17:17:46 0/1:49:13:5:8:51:25.49%:42:5.092E-5:49:38:25:13:51 0/1:44:12:5:7:46:26.09%:39:1.0724E-4:44:34:18:16:46 0/1:45:9:3:6:30:30%:30:9.678E-4:46:21:11:10:30 0/1:37:7:3:4:27:25.93%:22:5.0143E-3:47:20:13:7:27 0/1:42:13:7:6:55:23.64%:42:5.473E-5:41:42:14:28:55 0/1:46:12:7:5:43:27.91%:39:1.0032E-4:44:31:17:14:43 0/1:45:11:5:6:33:33.33%:37:1.8019E-4:43:22:15:7:34 0/0:41:6:3:3:34:17.65%:23:1.2287E-2:48:28:11:17:35 0/0:49:2:0:2:31:6.45%:40:2.459E-1:46:29:14:15:31 0/1:42:9:3:6:40:22.5%:29:1.1791E-3:47:31:17:14:40 0/0:40:6:2:4:29:20.69%:18:1.1736E-2:49:23:12:11:29 0/0:51:5:0:5:29:17.24%:22:2.5917E-2:49:24:6:18:29 0/1:39:10:4:6:32:31.25%:33:4.259E-4:48:22:10:12:32 0/1:49:10:8:2:43:23.26%:32:5.4148E-4:46:33:19:14:44 0/1:46:10:2:8:28:35.71%:34:3.6855E-4:56:18:8:10:28 0/1:44:12:6:6:52:23.08%:39:1.1939E-4:41:40:20:20:53 0/1:42:17:9:8:46:36.96%:59:1.2413E-6:46:29:14:15:47 0/1:40:9:3:6:50:18%:28:1.3171E-3:47:41:24:17:52 0/1:43:15:10:5:33:45.45%:54:3.8647E-6:44:18:6:12:33 0/1:42:11:7:4:36:30.56%:37:1.9879E-4:44:25:11:14:36 0/1:42:11:7:4:44:25%:36:2.3962E-4:44:33:18:15:44 0/0:35:6:2:4:36:16.67%:25:1.2467E-2:43:30:15:15:36 0/1:40:8:3:5:39:20.51%:25:2.624E-3:43:31:19:12:39 0/1:41:10:4:6:32:31.25%:33:4.259E-4:45:22:10:12:32 0/1:42:10:2:8:40:25%:32:5.1483E-4:48:30:14:16:40 0/1:42:13:5:8:39:33.33%:44:3.6837E-5:44:26:14:12:39 0/0:40:6:2:4:31:19.35%:20:1.1977E-2:40:25:14:11:31 0/1:43:8:3:5:41:19.51%:25:2.6808E-3:45:33:20:13:41 0/1:39:8:3:5:37:21.62%:25:2.5617E-3:46:29:16:13:37 0/1:44:7:3:4:34:20.59%:22:5.5492E-3:46:27:14:13:36 0/1:38:16:8:8:46:34.78%:55:3.1446E-6:44:30:16:14:46 0/1:46:10:7:3:49:20.41%:32:5.8675E-4:49:39:19:20:49 0/1:39:9:2:7:45:20%:29:1.2547E-3:44:36:20:16:45 0/1:40:15:9:6:50:30%:50:8.8847E-6:46:35:18:17:50 0/1:41:11:7:4:41:26.83%:36:2.2563E-4:44:30:17:13:43 0/1:44:10:5:5:36:27.78%:33:4.7404E-4:43:26:16:10:38 0/1:40:9:5:4:33:27.27%:29:1.042E-3:42:24:16:8:33 0/1:40:11:5:6:46:23.91%:36:2.4819E-4:40:35:20:15:47 0/1:48:12:6:6:44:27.27%:39:1.027E-4:44:32:19:13:46 0/1:40:8:3:5:26:30.77%:26:2.076E-3:41:18:13:5:26 0/1:47:14:4:10:55:25.45%:46:2.3698E-5:46:41:20:21:56 0/1:41:10:5:5:34:29.41%:33:4.51E-4:42:24:17:7:34 0/1:38:17:8:9:56:30.36%:57:1.8236E-6:44:39:24:15:56 0/1:43:17:9:8:74:22.97%:55:2.7049E-6:42:57:24:33:74 0/1:45:12:7:5:36:33.33%:40:8.1472E-5:46:24:9:15:36 0/1:46:10:8:2:33:30.3%:33:4.3872E-4:45:23:14:9:35 0/1:40:18:7:11:59:30.51%:60:8.2591E-7:40:41:25:16:59 0/1:42:9:2:7:54:16.67%:28:1.3596E-3:45:45:24:21:55 0/1:42:13:9:4:61:21.31%:42:5.9784E-5:40:48:32:16:64 0/1:37:11:4:7:63:17.46%:35:3.031E-4:39:52:26:26:65 0/1:45:11:4:7:51:21.57%:35:2.6733E-4:41:40:17:23:52 0/1:42:9:7:2:39:23.08%:29:1.162E-3:46:30:18:12:40 0/1:47:9:3:6:41:21.95%:29:1.1955E-3:43:32:19:13:42 0/1:45:8:5:3:51:15.69%:25:2.9037E-3:40:43:20:23:51 0/1:38:20:9:11:58:34.48%:68:1.3135E-7:43:38:22:16:61 0/1:37:9:4:5:35:25.71%:29:1.0857E-3:39:26:17:9:37 0/1:44:9:2:7:44:20.45%:29:1.2408E-3:42:35:19:16:45 0/1:44:7:1:6:35:20%:22:5.6095E-3:40:28:17:11:36 0/1:44:14:7:7:47:29.79%:47:1.9604E-5:44:33:19:14:47 0/1:39:21:10:11:71:29.58%:70:8.3975E-8:40:50:31:19:71 0/1:48:15:7:8:62:24.19%:49:1.1665E-5:44:47:22:25:63 0/1:42:13:10:3:48:27.08%:43:4.7798E-5:43:35:19:16:49 0/1:42:13:4:9:52:25%:42:5.1909E-5:41:39:24:15:52 0/1:42:10:2:8:45:22.22%:32:5.5766E-4:43:35:18:17:45 0/1:41:10:5:5:32:31.25%:33:4.259E-4:44:22:9:13:32 0/1:39:10:5:5:43:23.26%:32:5.4148E-4:42:33:21:12:43 0/1:45:16:9:7:56:28.57%:53:4.3766E-6:44:40:16:24:56 0/1:40:7:5:2:36:19.44%:22:5.6667E-3:42:29:13:16:36 0/1:39:9:1:8:25:36%:30:8.1542E-4:44:16:11:5:25 0/1:46:15:7:8:46:32.61%:51:7.8109E-6:42:31:20:11:47 0/1:43:18:10:8:57:31.58%:61:7.7462E-7:47:39:15:24:58 0/1:44:21:10:11:72:29.17%:70:8.6393E-8:44:51:20:31:72 0/1:37:8:3:5:49:16.33%:25:2.8658E-3:44:41:26:15:50 MTB_anc 2867347 . A G . PASS AC=63;AF=0.210;AN=300;ANN=G|missense_variant|MODERATE|lppB_Rv2544|gene2604|transcript|Transcript_gene2604|Coding|1/1|c.224A>G|p.Gln75Arg|224/663|224/663|75/220||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2867347A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2867347A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:39:3:1:2:55:5.45%:73:1.2156E-1:42:52:28:24:55 0/0:39:1:1:0:25:4%:38:5E-1:50:24:11:13:25 0/1:40:21:13:8:58:36.21%:72:5.1992E-8:47:37:19:18:58 0/0:45:3:0:3:37:8.11%:43:1.1986E-1:45:34:18:16:37 0/0:38:6:2:4:33:18.18%:23:1.219E-2:42:27:15:12:33 0/0:45:6:4:2:37:16.22%:28:1.2549E-2:47:31:12:19:38 0/1:38:7:3:4:31:22.58%:22:5.3469E-3:48:24:10:14:31 0/0:37:3:2:1:34:8.82%:37:1.194E-1:47:31:14:17:35 0/1:38:9:3:6:50:18%:28:1.3171E-3:49:41:23:18:50 0/0:39:1:1:0:26:3.85%:38:5E-1:47:25:8:17:27 0/0:38:3:0:3:35:8.57%:40:1.1957E-1:45:32:22:10:35 0/1:37:14:8:6:65:21.54%:45:2.7899E-5:47:51:23:28:66 0/0:60:1:0:1:39:2.56%:62:5E-1:49:38:16:22:39 0/1:38:11:8:3:67:16.42%:35:3.1263E-4:46:56:37:19:67 0/0:44:4:2:2:26:15.38%:20:5.5222E-2:44:22:10:12:27 0/0:38:5:0:5:35:14.29%:30:2.6822E-2:45:30:16:14:35 0/0:38:4:4:0:34:11.76%:31:5.6946E-2:46:30:15:15:34 0/0:37:6:2:4:31:19.35%:20:1.1977E-2:44:25:9:16:31 0/0:37:3:1:2:31:9.68%:34:1.1885E-1:46:28:13:15:32 0/0:40:6:4:2:30:20%:18:1.186E-2:49:24:13:11:31 0/0:42:5:2:3:29:17.24%:22:2.5917E-2:45:24:12:12:29 0/1:39:9:7:2:60:15%:28:1.4138E-3:44:51:26:25:60 0/0:38:6:4:2:31:19.35%:20:1.1977E-2:46:25:13:12:31 0/0:38:4:2:2:38:10.53%:37:5.7534E-2:45:34:15:19:38 0/0:42:5:2:3:28:17.86%:19:2.5729E-2:42:23:9:14:28 0/0:37:6:4:2:31:19.35%:20:1.1977E-2:53:25:11:14:32 0/0:37:6:2:4:25:24%:14:1.1145E-2:44:19:13:6:25 0/0:36:2:1:1:25:8%:31:2.449E-1:48:23:11:12:25 0/1:40:10:4:6:35:28.57%:33:4.6276E-4:48:25:14:11:35 0/0:38:3:1:2:35:8.57%:40:1.1957E-1:42:32:19:13:35 0/0:37:2:1:1:34:5.88%:43:2.4627E-1:41:32:18:14:34 0/1:41:7:2:5:41:17.07%:22:5.9136E-3:45:34:16:18:41 0/1:44:7:4:3:39:17.95%:22:5.8219E-3:46:32:20:12:39 0/1:38:8:3:5:33:24.24%:26:2.4173E-3:48:25:13:12:34 0/1:44:11:8:3:40:27.5%:36:2.2064E-4:48:29:17:12:40 0/0:39:4:3:1:43:9.3%:47:5.8115E-2:46:39:16:23:43 0/0:37:6:3:3:49:12.24%:44:1.3285E-2:45:43:24:19:49 0/1:40:11:7:4:69:15.94%:34:3.1704E-4:48:58:31:27:70 0/1:37:7:2:5:58:12.07%:21:6.4484E-3:48:51:25:26:59 0/1:38:8:2:6:45:17.78%:25:2.7808E-3:47:37:18:19:46 0/0:45:6:4:2:34:17.65%:23:1.2287E-2:42:28:10:18:34 0/0:41:6:2:4:55:10.91%:53:1.3535E-2:42:49:19:30:56 0/1:37:8:1:7:31:25.81%:26:2.3332E-3:48:23:13:10:31 0/1:40:8:5:3:30:26.67%:26:2.2875E-3:44:22:9:13:30 0/0:38:1:1:0:33:3.03%:52:5E-1:43:32:22:10:33 0/1:43:10:6:4:36:27.78%:33:4.7404E-4:48:26:12:14:36 0/0:38:3:1:2:27:11.11%:28:1.1792E-1:43:24:11:13:27 0/0:38:5:2:3:40:12.5%:35:2.7371E-2:44:35:22:13:40 0/1:40:9:5:4:38:23.68%:29:1.1442E-3:43:29:19:10:40 0/0:45:3:3:0:40:7.5%:46:1.2025E-1:47:37:21:16:40 0/0:49:2:2:0:22:9.09%:24:2.4419E-1:50:20:9:11:22 0/0:38:3:0:3:37:8.11%:43:1.1986E-1:47:34:18:16:38 0/1:38:8:5:3:39:20.51%:25:2.624E-3:48:31:18:13:39 0/0:39:4:1:3:38:10.53%:37:5.7534E-2:46:34:19:15:39 0/0:37:5:1:4:29:17.24%:19:2.5729E-2:41:23:15:8:29 0/0:38:4:2:2:43:9.3%:47:5.8115E-2:44:39:19:20:45 0/0:37:5:2:3:44:11.36%:41:2.7721E-2:44:39:17:22:44 0/0:38:3:0:3:39:7.69%:47:1.2013E-1:49:36:21:15:39 0/1:38:7:3:4:49:14.29%:22:6.2092E-3:43:42:23:19:49 0/1:39:12:5:7:56:21.43%:38:1.2642E-4:47:44:23:21:57 0/0:38:5:2:3:36:13.89%:29:2.6944E-2:48:31:18:13:36 0/1:38:7:3:4:39:17.95%:22:5.8219E-3:48:32:10:22:41 0/1:40:8:4:4:41:19.51%:25:2.6808E-3:46:33:19:14:41 0/0:42:6:2:4:34:17.65%:23:1.2287E-2:52:28:9:19:34 0/1:39:8:4:4:57:14.04%:25:3.0025E-3:46:49:27:22:57 0/1:38:12:5:7:61:19.67%:38:1.3273E-4:48:48:27:21:61 0/0:39:2:0:2:23:8.7%:28:2.4444E-1:46:21:10:11:23 0/1:39:12:8:4:47:25.53%:39:1.0942E-4:47:35:22:13:48 0/0:38:3:3:0:21:14.29%:19:1.1585E-1:51:18:10:8:21 0/0:39:3:2:1:24:12.5%:22:1.1702E-1:51:21:10:11:24 0/0:42:6:4:2:31:19.35%:20:1.1977E-2:49:25:13:12:31 0/0:38:5:2:3:43:11.63%:41:2.764E-2:51:38:14:24:43 0/0:39:2:1:1:15:13.33%:16:2.4138E-1:50:13:7:6:15 0/0:38:5:4:1:40:12.5%:35:2.7371E-2:47:35:15:20:40 0/0:38:4:2:2:37:10.81%:38:5.7399E-2:42:33:21:12:37 0/0:45:6:2:4:32:18.75%:20:1.2087E-2:44:26:14:12:32 0/0:37:6:3:3:40:15%:30:1.2773E-2:48:34:18:16:41 0/1:37:9:3:6:47:19.15%:28:1.2811E-3:48:38:21:17:47 0/0:38:5:1:4:33:15.15%:27:2.6557E-2:49:28:13:15:34 0/0:38:4:0:4:27:14.81%:23:5.5494E-2:48:23:14:9:28 0/0:38:1:0:1:25:4%:38:5E-1:44:24:14:10:25 0/1:38:8:4:4:46:17.39%:25:2.8033E-3:40:38:17:21:46 0/1:45:10:6:4:36:27.78%:33:4.7404E-4:46:26:15:11:36 0/1:44:8:4:4:31:25.81%:26:2.3332E-3:44:23:14:9:31 0/0:38:3:1:2:39:7.69%:47:1.2013E-1:47:36:13:23:40 0/0:39:1:0:1:30:3.33%:44:5E-1:46:29:14:15:31 0/1:38:8:2:6:45:17.78%:25:2.7808E-3:45:37:20:17:45 0/0:39:2:1:1:24:8.33%:27:2.4468E-1:46:22:12:10:25 0/0:53:3:0:3:28:10.71%:28:1.1818E-1:52:25:6:19:28 0/0:37:5:2:3:28:17.86%:19:2.5729E-2:49:23:12:11:28 0/0:39:5:4:1:41:12.2%:38:2.7465E-2:48:36:23:13:41 0/0:37:5:1:4:24:20.83%:14:2.4823E-2:48:19:10:9:24 0/1:36:9:4:5:45:20%:29:1.2547E-3:45:36:17:19:45 0/1:37:11:5:6:40:27.5%:36:2.2064E-4:46:29:11:18:40 0/0:37:6:2:4:48:12.5%:41:1.3237E-2:44:42:24:18:48 0/1:43:9:4:5:27:33.33%:30:8.8132E-4:43:18:7:11:27 0/1:36:8:6:2:31:25.81%:26:2.3332E-3:42:23:10:13:31 0/1:41:8:6:2:40:20%:25:2.653E-3:46:32:15:17:40 0/0:38:4:1:3:36:11.11%:34:5.7257E-2:44:32:16:16:37 0/0:38:5:3:2:34:14.71%:27:2.6693E-2:45:29:19:10:34 0/0:41:5:1:4:30:16.67%:21:2.6093E-2:46:25:10:15:30 0/0:37:5:1:4:35:14.29%:30:2.6822E-2:46:30:16:14:35 0/1:37:8:4:4:35:22.86%:26:2.4931E-3:44:27:16:11:36 0/0:38:5:2:3:26:19.23%:17:2.531E-2:41:21:11:10:26 0/0:37:6:3:3:35:17.14%:25:1.238E-2:45:29:18:11:36 0/0:40:6:2:4:32:18.75%:20:1.2087E-2:45:26:12:14:32 0/0:39:3:1:2:25:12%:25:1.1735E-1:43:22:8:14:25 0/1:37:12:6:6:42:28.57%:40:9.7866E-5:48:30:15:15:42 0/1:41:7:5:2:48:14.58%:22:6.1774E-3:46:41:20:21:48 0/1:41:7:1:6:44:15.91%:22:6.0363E-3:44:37:19:18:44 0/1:41:8:5:3:44:18.18%:25:2.7573E-3:45:36:20:16:44 0/0:42:6:3:3:35:17.14%:25:1.238E-2:42:29:13:16:35 0/1:38:8:4:4:32:25%:26:2.3764E-3:45:24:16:8:33 0/0:38:6:3:3:31:19.35%:20:1.1977E-2:46:25:15:10:31 0/0:38:5:2:3:38:13.16%:32:2.7169E-2:42:33:19:14:40 0/1:42:9:4:5:43:20.93%:29:1.2263E-3:42:34:20:14:45 0/0:36:6:1:5:26:23.08%:13:1.1309E-2:40:20:14:6:26 0/1:40:9:1:8:53:16.98%:28:1.3495E-3:46:44:22:22:53 0/0:37:6:2:4:34:17.65%:23:1.2287E-2:43:28:19:9:34 0/1:38:12:4:8:56:21.43%:38:1.2642E-4:47:44:27:17:56 0/1:38:9:4:5:69:13.04%:28:1.4788E-3:42:60:27:33:69 0/1:38:8:5:3:34:23.53%:26:2.4562E-3:42:26:11:15:34 0/1:36:8:6:2:32:25%:26:2.3764E-3:41:24:13:11:34 0/1:38:10:2:8:54:18.52%:32:6.18E-4:40:44:26:18:55 0/0:38:6:0:6:46:13.04%:39:1.3136E-2:45:40:22:18:48 0/1:37:7:5:2:61:11.48%:21:6.5131E-3:41:54:32:22:62 0/0:37:5:0:5:54:9.26%:55:2.8371E-2:41:49:22:27:56 0/1:41:7:2:5:45:15.56%:22:6.0738E-3:40:38:15:23:46 0/0:44:3:3:0:36:8.33%:40:1.1972E-1:45:33:22:11:38 0/1:42:8:3:5:42:19.05%:25:2.7074E-3:43:34:19:15:43 0/0:37:4:2:2:48:8.33%:52:5.8574E-2:41:44:20:24:50 0/1:41:16:4:12:54:29.63%:53:4.1444E-6:41:38:21:17:54 0/0:38:5:1:4:33:15.15%:27:2.6557E-2:41:28:18:10:34 0/1:40:7:1:6:42:16.67%:22:5.9563E-3:42:35:21:14:43 0/0:38:3:0:3:31:9.68%:34:1.1885E-1:38:28:14:14:33 0/1:38:10:4:6:35:28.57%:33:4.6276E-4:45:25:14:11:36 0/1:38:12:5:7:65:18.46%:38:1.3976E-4:40:53:31:22:66 0/1:38:12:4:8:56:21.43%:38:1.2642E-4:43:44:20:24:56 0/1:38:7:5:2:47:14.89%:22:6.1442E-3:45:40:22:18:47 0/1:37:10:4:6:48:20.83%:32:5.7985E-4:40:38:27:11:48 0/0:38:6:1:5:38:15.79%:28:1.2628E-2:44:32:17:15:38 0/0:38:6:2:4:32:18.75%:20:1.2087E-2:44:26:13:13:32 0/0:37:5:2:3:37:13.51%:32:2.706E-2:41:32:19:13:37 0/1:38:9:5:4:48:18.75%:28:1.2935E-3:46:39:15:24:48 0/0:38:3:2:1:33:9.09%:37:1.1923E-1:42:30:12:18:33 0/0:42:6:0:6:22:27.27%:9:1.057E-2:46:16:11:5:22 0/1:41:8:5:3:49:16.33%:25:2.8658E-3:41:41:23:18:49 0/1:38:12:6:6:49:24.49%:39:1.1358E-4:46:37:12:25:49 0/1:38:10:5:5:61:16.39%:31:6.543E-4:43:51:22:29:61 0/0:38:5:0:5:47:10.64%:47:2.7945E-2:46:42:25:17:48 MTB_anc 2868774 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|vapB19_Rv2547|gene2607|transcript|Transcript_gene2607|Coding|1/1|c.169T>C|p.Trp57Arg|169/258|169/258|57/85||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2868774T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2868774T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:54:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:51:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:14:16:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:48:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:53:36:17:54:98.15%:99:1.5943E-31:0:0:0:0:54 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:53:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:35:22:13:36:97.22%:99:8.9137E-21:0:0:0:0:38 1/1:49:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:20:12:8:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:41:23:18:42:97.62%:99:2.5612E-23:38:1:0:1:46 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:41:26:15:42:97.62%:99:2.5612E-23:60:1:1:0:42 1/1:40:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:36:20:16:37:97.3%:99:2.2598E-21:0:0:0:0:39 1/1:38:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:75:44:31:75:100%:99:1.0773E-44:0:0:0:0:77 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:37:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:36:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:38:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:40:10:30:41:97.56%:99:9.8874E-23:37:1:0:1:43 1/1:37:61:30:31:61:100%:99:2.609E-36:0:0:0:0:62 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:47:25:22:48:97.92%:99:7.6145E-27:31:1:1:0:48 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 MTB_anc 2869283 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv2548A_Rv2548A|gene2609|transcript|Transcript_gene2609|Coding|1/1|c.345C>T|p.Leu115Leu|345/375|345/375|115/124||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2869283G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2869283G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:45:50:25:25:51 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:23 0/0:0:0:0:0:46:0%:85:1E0:45:46:19:27:46 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:36 0/0:37:1:0:1:31:3.23%:48:5E-1:47:30:9:21:31 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:26 0/0:0:0:0:0:31:0%:59:1E0:51:31:14:17:31 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:44:0%:81:1E0:50:44:23:21:44 0/0:0:0:0:0:58:0%:99:1E0:45:58:33:25:58 0/0:0:0:0:0:25:0%:48:1E0:51:25:13:12:25 0/0:0:0:0:0:50:0%:92:1E0:47:50:23:27:52 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:7:16:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:50 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:38:0%:70:1E0:48:38:25:13:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:19:0%:37:1E0:48:19:5:14:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:48:2:1:1:39:5.13%:54:2.4675E-1:51:37:22:15:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:40:0%:74:1E0:47:40:15:25:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:39 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:42 0/0:36:1:1:0:61:1.64%:99:5E-1:45:60:24:36:61 0/0:0:0:0:0:54:0%:99:1E0:48:54:25:29:55 0/0:0:0:0:0:53:0%:99:1E0:43:53:20:33:53 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:27 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:42 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:46 0/0:0:0:0:0:51:0%:97:1E0:42:51:18:33:51 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:60:1:1:0:49:2.04%:80:5E-1:42:48:28:20:49 0/0:0:0:0:0:18:0%:32:1E0:49:18:7:11:19 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:34 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:22 0/0:0:0:0:0:45:0%:85:1E0:40:45:19:26:45 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:46 0/0:0:0:0:0:35:0%:67:1E0:51:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:12:26:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:41 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:33 0/0:0:0:0:0:70:0%:99:1E0:46:70:35:35:71 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:23 0/0:0:0:0:0:45:0%:85:1E0:46:45:21:24:46 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:53:26:9:17:26 0/0:0:0:0:0:25:0%:48:1E0:52:25:14:11:25 0/0:0:0:0:0:39:0%:74:1E0:50:39:19:20:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:31:0%:59:1E0:47:31:20:11:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:47 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:38:0%:70:1E0:46:38:23:15:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:24 0/0:39:1:0:1:41:2.44%:66:5E-1:46:40:19:21:41 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:17 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:31 0/0:60:1:1:0:21:4.76%:31:5E-1:49:20:11:9:21 0/0:0:0:0:0:53:0%:99:1E0:41:53:20:33:54 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:54:0%:99:1E0:43:54:25:29:54 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:48 0/0:0:0:0:0:41:0%:78:1E0:43:41:14:27:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:7:16:23 0/0:0:0:0:0:42:0%:77:1E0:42:42:14:28:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:60:1:0:1:30:3.33%:44:5E-1:47:29:15:14:33 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:48 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:21:27:48 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:48 0/0:0:0:0:0:63:0%:99:1E0:41:63:32:31:65 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:35 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:38 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:56:0%:99:1E0:44:56:23:33:56 0/0:0:0:0:0:65:0%:99:1E0:45:65:31:34:66 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:24 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:50:0%:92:1E0:39:50:20:30:50 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:49 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:45 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:55 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:41 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:49:0%:93:1E0:45:49:19:30:50 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:49 0/0:0:0:0:0:49:0%:93:1E0:40:49:22:27:51 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:50:0%:92:1E0:38:50:19:31:52 0/0:0:0:0:0:56:0%:99:1E0:42:56:28:28:56 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:49 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:41 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:60:1:1:0:53:1.89%:88:5E-1:45:52:29:23:53 0/0:0:0:0:0:52:0%:96:1E0:44:52:29:23:53 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 MTB_anc 2870142 . C A . PASS AC=68;AF=0.227;AN=300;ANN=A|missense_variant|MODERATE|vapB20_Rv2550c|gene2611|transcript|Transcript_gene2611|Coding|1/1|c.223G>T|p.Val75Leu|223/246|223/246|75/81||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2870142C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2870142C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:41:44:18:26:44 0/0:0:0:0:0:17:0%:33:1E0:52:17:9:8:17 0/0:0:0:0:0:43:0%:82:1E0:49:43:19:24:44 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:29:0%:55:1E0:51:29:13:16:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:11:20:31 1/1:48:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:55 0/0:0:0:0:0:14:0%:25:1E0:49:14:6:8:14 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:49 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:42 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:23 0/0:0:0:0:0:54:0%:99:1E0:43:54:34:20:55 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:10:23:33 0/0:0:0:0:0:38:0%:70:1E0:45:37:17:20:39 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 1/1:44:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:22 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:43 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:42 0/0:0:0:0:0:54:0%:99:1E0:48:54:25:29:54 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:38 0/0:0:0:0:0:47:0%:89:1E0:43:47:15:32:47 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:49 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:37:1:1:0:24:4.35%:34:5E-1:39:22:9:13:24 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:55 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:40 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:26:0%:47:1E0:46:26:19:7:26 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:44 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:23 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:19 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:40 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:48 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:33:12:21:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:40:0%:74:1E0:47:40:13:27:40 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:13:0%:25:1E0:47:13:8:5:13 1/1:49:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:30 0/0:38:1:0:1:38:2.63%:58:5E-1:49:37:15:22:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:53 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 1/1:45:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:30 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:24:0%:44:1E0:53:24:11:13:24 0/0:39:1:0:1:42:2.38%:66:5E-1:40:41:21:20:42 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:47 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:60:1:0:1:34:2.94%:51:5E-1:44:33:14:19:34 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:41 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:42:0%:77:1E0:46:42:16:26:42 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:20:0%:36:1E0:43:20:4:16:20 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:39 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:44 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 1/1:45:43:19:24:44:97.73%:99:1.7144E-24:37:1:1:0:45 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:23 0/0:0:0:0:0:60:0%:99:1E0:42:60:30:30:61 1/1:43:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 0/0:0:0:0:0:33:0%:63:1E0:42:33:23:10:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:32 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:51 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:52 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:42 0/0:0:0:0:0:48:0%:89:1E0:37:48:21:27:50 0/0:0:0:0:0:38:0%:70:1E0:40:38:13:25:39 0/0:0:0:0:0:46:0%:85:1E0:41:46:17:29:47 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:40 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:49:0%:93:1E0:38:49:24:25:52 0/0:0:0:0:0:47:0%:89:1E0:43:47:16:31:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:38 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:16 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 0/0:0:0:0:0:57:0%:99:1E0:44:57:34:23:57 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:32 MTB_anc 2870386 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|vapB20_Rv2550c-Rv2551c_Rv2551c|gene2611-gene2612|intergenic_region|gene2611-gene2612|||n.2870386T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:14:14:29:96.55%:99:1.3074E-16:0:0:0:0:31 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:44:25:19:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:21:10:11:22:100%:99:1.8578E-12:0:0:0:0:24 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:48:30:18:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:30:17:13:31:96.77%:99:6.8754E-17:39:1:1:0:32 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:18:8:10:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:23:18:42:97.62%:99:2.5612E-23:39:1:1:0:43 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:64:35:29:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:48:29:19:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:36:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:38:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2873476 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2554c_Rv2554c|gene2615|transcript|Transcript_gene2615|Coding|1/1|c.295G>A|p.Ala99Thr|295/513|295/513|99/170||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2873476C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2873476C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:56:36:20:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:22:12:10:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:49:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:43:19:24:44:97.73%:99:1.7144E-24:38:1:1:0:46 1/1:39:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:40:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:37:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:36:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:38:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:48:21:27:49:97.96%:99:1.9625E-27:37:1:0:1:50 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:43:27:16:44:97.73%:99:1.7144E-24:60:1:0:1:45 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 2877461 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2557_Rv2557|gene2618|transcript|Transcript_gene2618|Coding|1/1|c.390G>A|p.Lys130Lys|390/675|390/675|130/224||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2877461G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2877461G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:46:34:12:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:51:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:13:11:25:96%:99:2.0568E-13:39:1:1:0:26 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:22:14:37:97.3%:99:2.1762E-20:38:1:0:1:37 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:54:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:24:12:12:25:96%:99:2.0568E-13:38:1:1:0:25 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:20:18:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 2878980 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2559c_Rv2559c|gene2620|transcript|Transcript_gene2620|Coding|1/1|c.950A>G|p.Asp317Gly|950/1359|950/1359|317/452||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2878980T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2878980T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:36:19:17:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:25:19:6:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:45:20:25:46:97.83%:99:9.6314E-27:0:0:0:0:47 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2880738 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv2560_Rv2560|gene2621|transcript|Transcript_gene2621|Coding|1/1|c.664G>T|p.Gly222Cys|664/978|664/978|222/325||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2880738G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2880738G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:48 0/0:0:0:0:0:24:0%:44:1E0:51:24:10:14:24 0/0:0:0:0:0:52:0%:96:1E0:44:52:32:20:52 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:46:0%:85:1E0:49:46:23:23:46 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:46:0%:85:1E0:52:46:22:24:46 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:51:32:17:15:32 0/0:0:0:0:0:55:0%:99:1E0:46:55:21:34:56 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:23 0/0:0:0:0:0:62:0%:99:1E0:45:62:37:25:64 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:31 0/0:0:0:0:0:43:0%:82:1E0:46:43:24:19:43 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:53:0%:99:1E0:47:53:30:23:54 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:12:0%:21:1E0:44:12:5:7:12 0/0:0:0:0:0:26:0%:47:1E0:41:26:19:7:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:41 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:43 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:37:0%:70:1E0:49:37:24:13:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:78:0%:99:1E0:48:78:42:36:78 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:45 0/0:0:0:0:0:59:0%:99:1E0:44:59:31:28:59 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:35 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:19 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:25 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:43 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:49 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:37 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:43 0/0:0:0:0:0:41:0%:78:1E0:43:41:28:13:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:32 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:50 0/0:0:0:0:0:52:0%:96:1E0:48:52:30:22:53 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:45 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:25 0/0:0:0:0:0:49:0%:93:1E0:48:49:25:24:49 0/0:0:0:0:0:72:0%:99:1E0:46:72:43:29:72 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:16 0/0:60:1:0:1:28:3.57%:41:5E-1:44:27:11:16:28 0/0:0:0:0:0:42:0%:77:1E0:48:42:24:18:42 0/0:0:0:0:0:26:0%:47:1E0:48:26:19:7:27 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:50:38:21:17:38 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:35 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:20:8:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:53:0%:99:1E0:47:53:25:28:53 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:41 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:20 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 0/0:0:0:0:0:22:0%:40:1E0:42:22:17:5:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:39 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:40 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 0/0:37:1:0:1:27:3.7%:41:5E-1:48:26:13:13:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:23 0/0:38:1:0:1:27:3.7%:41:5E-1:41:26:14:12:27 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:36:0%:66:1E0:48:36:12:24:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:50:0%:92:1E0:40:50:32:18:51 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:22:0%:40:1E0:41:22:8:14:23 0/0:0:0:0:0:53:0%:99:1E0:42:53:20:33:54 0/0:0:0:0:0:64:0%:99:1E0:40:64:33:31:65 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:54 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:47 0/0:0:0:0:0:55:0%:99:1E0:43:55:21:34:58 0/0:0:0:0:0:53:0%:99:1E0:39:53:31:22:54 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:45 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:43 0/0:0:0:0:0:50:0%:92:1E0:43:50:30:20:51 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:46 0/0:0:0:0:0:42:0%:77:1E0:41:42:29:13:43 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:32:1:0:1:49:2.04%:80:5E-1:43:48:29:19:53 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:37 0/0:39:1:0:1:43:2.33%:70:5E-1:43:42:26:16:44 0/0:0:0:0:0:71:0%:99:1E0:39:71:43:28:73 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:52 0/0:0:0:0:0:46:0%:85:1E0:45:46:19:27:46 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:49 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:32 0/0:0:0:0:0:49:0%:93:1E0:44:49:24:25:49 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:41:0%:78:1E0:48:41:20:21:41 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:48 0/0:0:0:0:0:59:0%:99:1E0:44:59:30:29:59 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 MTB_anc 2881088 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv2560_Rv2560-Rv2561_Rv2561|gene2621-gene2622|intergenic_region|gene2621-gene2622|||n.2881088C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:54:17:37:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:58:14:44:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:44:64:26:38:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:6:29:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:70:23:47:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:63:21:42:63:100%:99:1.657E-37:0:0:0:0:63 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:49:19:30:50:98%:99:3.925E-29:0:0:0:0:50 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:45:11:34:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:51:14:37:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:49:9:40:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:63:28:35:63:100%:99:1.657E-37:0:0:0:0:63 1/1:40:62:15:47:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:48:14:34:48:100%:99:1.554E-28:0:0:0:0:52 1/1:44:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:39:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:51 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:59:20:39:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:28:10:18:29:96.55%:99:9.9776E-16:39:1:1:0:30 1/1:44:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2881582 . GT G . PASS AC=290;AF=0.967;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2881583delT||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2881583delT||||||,G|intragenic_variant|MODIFIER|Rv2561_Rv2561|gene2622|gene_variant|gene2622|||n.2881583delT||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:41:13:28:44:93.18%:99:6.1775E-22:41:3:1:2:44 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:26:12:14:28:92.86%:99:5.6872E-14:33:2:2:0:28 1/1:43:24:7:17:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:48:22:12:10:24:91.67%:99:1.0078E-11:32:2:2:0:24 1/1:46:33:18:15:35:94.29%:99:5.9366E-18:32:2:1:1:35 1/1:42:22:11:11:23:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:10:16:27:96.3%:99:1.4382E-14:34:1:1:0:28 1/1:46:28:12:16:29:96.55%:99:9.9776E-16:31:1:1:0:29 1/1:38:45:25:20:48:91.84%:99:1.1493E-23:33:4:3:1:49 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:44:21:23:46:95.65%:99:2.7459E-24:34:2:0:2:46 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 0/1:44:19:8:11:22:86.36%:89:1.0931E-9:43:3:2:1:22 1/1:41:33:21:12:35:94.29%:99:5.9366E-18:33:2:1:1:35 0/1:42:22:11:11:25:84.62%:99:5.5261E-11:34:4:1:3:26 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:19:7:12:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:41:48:20:28:49:97.96%:99:1.9625E-27:34:1:1:0:49 1/1:43:27:14:13:29:93.1%:99:1.5465E-14:33:2:1:1:29 1/1:44:34:15:19:35:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:42:30:12:18:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:42:17:12:5:17:94.44%:86:2.0936E-9:33:1:0:1:18 0/1:45:18:8:10:22:81.82%:84:3.7603E-9:33:3:1:2:22 1/1:48:21:9:12:21:95.45%:99:1.0931E-11:72:1:1:0:22 1/1:41:28:13:15:29:96.55%:99:9.9776E-16:35:1:0:1:29 1/1:43:28:15:13:29:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:43:23:16:7:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:19:16:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:27:14:13:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:14:13:29:93.1%:99:1.5465E-14:33:2:1:1:29 1/1:46:33:22:11:34:97.06%:99:1.2301E-18:34:1:1:0:34 1/1:44:61:32:29:60:100%:99:2.609E-36:0:0:0:0:61 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:24:17:43:95.35%:99:1.4915E-22:34:2:0:2:43 1/1:41:36:14:22:37:97.3%:99:2.1762E-20:35:1:0:1:37 1/1:44:29:15:14:31:93.55%:99:1.1344E-15:33:2:0:2:31 1/1:40:17:11:6:18:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:42:18:7:11:18:94.74%:92:5.6585E-10:38:1:0:1:19 1/1:43:27:14:13:28:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:42:33:22:11:35:94.29%:99:5.9366E-18:34:2:1:1:35 1/1:46:31:13:18:32:96.88%:99:1.8007E-17:26:1:1:0:32 1/1:44:25:13:12:26:96.15%:99:5.4444E-14:33:1:1:0:27 1/1:41:39:17:22:40:95.12%:99:2.1258E-21:46:2:0:2:41 1/1:45:35:19:16:36:97.22%:99:8.3613E-20:34:1:1:0:36 1/1:44:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:32:12:20:32:96.97%:99:4.7095E-18:35:1:0:1:33 1/1:43:22:11:11:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:11:11:23:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:43:34:20:14:36:94.44%:99:1.5887E-18:35:2:2:0:36 1/1:42:27:12:15:27:96.43%:99:3.7915E-15:34:1:1:0:28 0/1:44:22:7:15:25:88%:99:2.5916E-11:34:3:1:2:25 1/1:42:46:23:23:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:36:17:19:40:90%:99:1.2627E-18:39:4:1:3:40 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:27:11:16:29:93.1%:99:1.5465E-14:34:2:1:1:29 1/1:46:30:14:16:31:96.77%:99:6.8754E-17:29:1:0:1:31 1/1:44:54:21:33:57:94.74%:99:2.2097E-29:33:3:0:3:58 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:21:25:47:97.87%:99:2.9526E-26:37:1:1:0:47 1/1:50:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:23:12:11:23:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:45:37:11:26:40:92.5%:99:1.1479E-19:30:3:2:1:40 1/1:49:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:52:17:9:8:19:89.47%:86:2.0936E-9:60:1:1:0:19 1/1:49:41:19:22:42:97.62%:99:2.5612E-23:33:1:0:1:42 0/1:41:22:7:15:25:88%:99:2.5916E-11:35:3:1:2:25 1/1:47:34:16:18:35:97.14%:99:3.2089E-19:38:1:1:0:35 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:43:19:24:45:95.56%:99:1.0412E-23:49:2:1:1:45 1/1:40:25:10:15:27:92.59%:99:2.0853E-13:35:2:1:1:27 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:17:15:33:96.97%:99:4.7095E-18:33:1:1:0:33 1/1:41:33:12:21:35:94.29%:99:5.9366E-18:33:2:1:1:35 1/1:46:21:8:13:23:95.45%:99:1.0931E-11:37:1:1:0:23 1/1:46:32:15:17:34:94.12%:99:2.2142E-17:46:2:1:1:34 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:33:13:20:34:97.06%:99:1.2301E-18:34:1:1:0:34 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:37:18:19:39:94.87%:99:5.6582E-21:33:1:1:0:39 1/1:46:25:16:9:26:96.15%:99:5.4444E-14:24:1:1:0:26 1/1:38:43:20:23:43:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:41:29:16:13:31:93.55%:99:1.1344E-15:33:2:0:2:31 1/1:46:41:23:18:43:95.35%:99:1.4915E-22:34:2:0:2:43 1/1:40:30:16:14:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:15:16:33:93.94%:99:8.2416E-17:36:2:1:1:33 1/1:44:28:12:16:28:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:41:29:16:13:30:96.67%:99:2.6212E-16:33:1:1:0:30 0/1:41:37:20:17:41:88.1%:99:9.1365E-19:33:5:4:1:42 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:11:8:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:11:12:24:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:41:20:7:13:22:90.91%:98:1.3117E-10:35:2:2:0:22 1/1:41:35:18:17:37:94.59%:99:8.3613E-20:32:1:0:1:37 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:17:17:36:94.44%:99:1.5887E-18:33:2:2:0:36 1/1:44:26:13:13:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:42:32:15:17:33:96.97%:99:4.7095E-18:31:1:1:0:33 1/1:45:25:11:14:26:92.59%:99:2.0853E-13:33:2:0:2:27 1/1:39:25:14:11:26:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:42:42:22:20:43:97.67%:99:6.6289E-24:33:1:0:1:43 1/1:42:31:12:19:32:96.88%:99:1.8007E-17:30:1:1:0:32 1/1:39:48:24:24:52:94.12%:99:6.2071E-26:29:3:2:1:52 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:41:20:21:42:97.62%:99:2.5612E-23:60:1:0:1:42 1/1:39:30:11:19:33:90.91%:99:9.89E-16:30:3:2:1:33 1/1:42:55:30:25:57:96.49%:99:1.1048E-30:35:2:1:1:57 1/1:42:50:25:25:53:94.34%:99:4.4193E-27:33:3:3:0:53 1/1:39:30:11:19:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:21:9:12:22:95.45%:99:1.0931E-11:30:1:0:1:22 1/1:38:60:31:29:59:100%:99:1.035E-35:0:0:0:0:60 1/1:41:35:19:16:37:94.59%:99:4.2437E-19:33:2:1:1:37 1/1:39:63:28:35:65:96.92%:99:2.3257E-35:28:2:1:1:65 1/1:39:42:17:25:45:93.33%:99:1.6658E-22:33:3:1:2:45 1/1:37:34:15:19:36:94.44%:99:1.5887E-18:35:2:1:1:36 1/1:38:30:10:20:32:93.75%:99:3.0612E-16:34:2:0:2:32 1/1:36:39:19:20:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:37:46:17:29:49:93.88%:99:8.6743E-25:32:3:2:1:50 1/1:42:52:30:22:53:98.11%:99:8.609E-30:37:1:1:0:53 1/1:37:35:16:19:37:94.59%:99:4.2437E-19:35:2:1:1:37 1/1:39:48:22:26:48:97.96%:99:1.9625E-27:32:1:1:0:49 1/1:38:39:20:19:42:92.86%:99:8.4519E-21:33:3:0:3:42 0/1:42:20:9:11:24:83.33%:91:6.3493E-10:34:4:3:1:24 1/1:39:43:20:23:46:93.48%:99:1.0412E-23:34:2:0:2:46 1/1:43:39:15:24:43:90.7%:99:2.6872E-20:34:4:3:1:43 1/1:39:40:27:13:42:95.24%:99:5.6346E-22:33:2:0:2:42 0/1:41:35:23:12:41:85.37%:99:2.5278E-17:32:6:3:3:41 1/1:41:34:15:19:37:91.89%:99:5.6582E-18:32:3:2:1:38 1/1:41:22:8:14:23:95.65%:99:2.9149E-12:34:1:1:0:23 1/1:39:29:13:16:30:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:39:21:18:40:97.5%:99:3.8137E-22:33:1:0:1:40 0/1:47:16:6:10:18:88.89%:76:2.0936E-8:36:2:1:1:18 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:39:16:23:40:97.5%:99:3.8137E-22:31:1:1:0:41 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:37:15:22:39:92.5%:99:1.1479E-19:33:3:1:2:40 MTB_anc 2881597 . AG A . PASS AC=295;AF=0.983;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2881598delG||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2881598delG||||||,A|intragenic_variant|MODIFIER|Rv2561_Rv2561|gene2622|gene_variant|gene2622|||n.2881598delG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:42:14:28:43:97.67%:99:6.6289E-24:34:1:0:1:43 1/1:47:28:17:11:28:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:43:40:18:22:42:95.24%:99:5.6346E-22:34:2:0:2:42 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:6:17:25:92%:99:2.7767E-12:38:2:2:0:25 1/1:49:21:12:9:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:46:32:17:15:33:94.12%:99:2.2142E-17:34:2:2:0:34 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:31:16:15:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:29:12:17:29:96.67%:99:2.6212E-16:38:1:1:0:30 1/1:40:45:25:20:47:93.75%:99:3.2362E-24:33:3:2:1:48 1/1:46:17:8:9:17:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:41:43:21:22:43:97.73%:99:1.7144E-24:60:1:0:1:44 0/1:44:19:7:12:22:86.36%:89:1.0931E-9:45:3:3:0:22 1/1:44:17:8:9:18:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:43:30:17:13:33:90.91%:99:9.89E-16:32:3:3:0:33 1/1:44:22:10:12:23:95.65%:99:2.9149E-12:60:1:1:0:24 1/1:42:27:14:13:29:93.1%:99:1.5465E-14:33:2:1:1:29 1/1:49:23:5:18:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:46:20:26:47:97.87%:99:2.9526E-26:33:1:0:1:47 1/1:43:25:12:13:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:45:33:15:18:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:42:30:12:18:31:96.77%:99:6.8754E-17:32:1:0:1:31 1/1:44:17:12:5:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:45:18:5:13:22:78.26%:79:1.1937E-8:54:5:4:1:23 1/1:41:29:14:15:29:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:24:18:6:25:92.31%:99:7.6222E-13:33:2:0:2:26 1/1:45:37:19:18:38:94.87%:99:3.0128E-20:33:2:1:1:39 1/1:43:27:12:15:28:96.43%:99:3.7915E-15:39:1:1:0:29 1/1:47:31:17:14:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:13:13:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:45:35:22:13:36:97.22%:99:8.3613E-20:39:1:1:0:36 1/1:47:60:32:28:63:93.75%:99:3.4002E-32:41:4:2:2:64 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:38:22:16:40:95%:99:8.0088E-21:28:2:1:1:40 1/1:41:35:13:22:36:97.22%:99:8.3613E-20:36:1:0:1:36 1/1:43:31:15:16:32:96.88%:99:1.8007E-17:33:1:1:0:32 1/1:42:16:10:6:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:18:7:11:18:94.74%:92:5.6585E-10:35:1:0:1:19 1/1:43:27:13:14:29:93.1%:99:1.5465E-14:33:2:2:0:29 1/1:42:32:21:11:34:94.12%:99:2.2142E-17:34:2:0:2:34 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:11:14:26:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:41:37:13:24:40:92.5%:99:1.1479E-19:34:3:3:0:40 1/1:44:36:17:19:36:97.3%:99:2.1762E-20:37:1:1:0:37 1/1:49:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 0/1:38:27:11:16:31:87.1%:99:1.125E-13:40:4:1:3:31 1/1:41:23:12:11:23:95.83%:99:7.7525E-13:34:1:0:1:24 1/1:40:31:17:14:32:93.94%:99:8.2416E-17:35:2:1:1:33 1/1:45:21:11:10:23:91.3%:99:3.6437E-11:34:2:0:2:23 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:29:13:16:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:43:22:21:44:97.73%:99:1.7144E-24:29:1:0:1:44 1/1:46:36:12:24:36:97.3%:99:2.1762E-20:47:1:1:0:37 1/1:44:31:16:15:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:42:20:22:43:97.67%:99:6.6289E-24:35:1:0:1:43 1/1:42:42:23:19:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:25:11:14:27:92.59%:99:2.0853E-13:33:2:0:2:27 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:56:20:36:58:96.55%:99:2.8822E-31:34:2:2:0:58 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:46:20:26:47:95.83%:99:1.9036E-25:31:2:2:0:48 1/1:51:15:11:4:16:93.75%:75:2.8282E-8:60:1:0:1:16 1/1:45:21:10:11:23:91.3%:99:3.6437E-11:33:2:2:0:23 1/1:45:37:12:25:39:94.87%:99:3.0128E-20:33:2:0:2:39 0/1:48:11:3:8:13:84.62%:49:1.0096E-5:47:2:0:2:13 1/1:49:18:9:9:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:40:20:20:43:93.02%:99:2.287E-21:33:3:0:3:43 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:33:16:17:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:40:34:17:17:34:97.14%:99:3.2089E-19:34:1:1:0:36 1/1:42:45:19:26:48:93.75%:99:3.2362E-24:32:3:2:1:48 1/1:41:27:12:15:29:93.1%:99:1.5465E-14:35:2:2:0:29 1/1:44:32:17:15:35:91.43%:99:7.5196E-17:35:3:1:2:35 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:22:9:13:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:48:30:13:17:33:90.91%:99:9.89E-16:42:3:2:1:33 1/1:41:18:9:9:16:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:34:13:21:33:97.14%:99:3.2089E-19:35:1:0:1:35 1/1:42:22:10:12:24:91.67%:99:1.0078E-11:28:2:1:1:24 1/1:45:27:8:19:26:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:16:16:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:41:20:21:42:97.62%:99:2.5612E-23:33:1:1:0:42 1/1:46:25:16:9:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:43:19:24:43:97.73%:99:1.7144E-24:32:1:1:0:44 1/1:42:29:17:12:30:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:44:42:23:19:43:97.67%:99:6.6289E-24:36:1:0:1:43 1/1:42:30:16:14:30:96.77%:99:6.8754E-17:32:1:0:1:31 1/1:42:27:14:13:30:90%:99:4.6134E-14:34:3:1:2:30 1/1:44:29:13:16:29:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:41:28:15:13:29:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:43:38:20:18:38:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:45:28:14:14:31:90.32%:99:1.2857E-14:33:3:0:3:31 1/1:44:21:12:9:22:95.45%:99:1.0931E-11:37:1:1:0:22 1/1:37:38:15:23:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:26:11:15:28:92.86%:99:5.6872E-14:34:2:0:2:28 1/1:41:22:10:12:22:95.65%:99:2.9149E-12:35:1:1:0:24 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:37:19:18:37:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:46:29:14:15:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:45:34:18:16:35:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:45:28:15:13:29:96.55%:99:9.9776E-16:33:1:0:1:29 1/1:42:31:14:17:33:93.94%:99:1.8007E-17:37:1:1:0:33 1/1:45:26:10:16:26:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:41:24:14:10:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:43:40:20:20:42:95.24%:99:5.6346E-22:33:2:2:0:42 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:51:24:27:53:94.44%:99:1.1771E-27:34:3:1:2:54 1/1:37:32:13:19:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:43:21:22:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:29:12:17:31:93.55%:99:1.1344E-15:30:2:0:2:31 1/1:42:54:29:25:58:93.1%:99:9.0836E-29:34:4:2:2:58 1/1:42:51:27:24:50:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:34:11:23:34:97.14%:99:3.2089E-19:30:1:1:0:35 1/1:39:23:9:14:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:61:30:31:60:96.83%:99:3.4466E-34:33:2:1:1:63 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:63:28:35:66:95.45%:99:1.3883E-34:34:3:2:1:66 1/1:37:44:16:28:44:97.78%:99:4.4304E-25:34:1:1:0:45 1/1:37:32:13:19:35:91.43%:99:7.5196E-17:31:3:1:2:35 1/1:39:33:10:23:34:97.06%:99:1.2301E-18:39:1:0:1:35 1/1:36:39:19:20:40:95.12%:99:2.1258E-21:35:2:1:1:41 1/1:38:45:15:30:47:93.75%:99:3.2362E-24:36:3:2:1:48 1/1:40:51:30:21:50:98.08%:99:3.3479E-29:34:1:0:1:52 1/1:37:38:16:22:39:97.44%:99:1.4697E-21:33:1:1:0:39 1/1:39:47:23:24:50:94%:99:2.3219E-25:33:3:0:3:50 1/1:39:39:18:21:39:97.5%:99:3.8137E-22:35:1:0:1:40 1/1:43:22:10:12:23:95.65%:99:2.9149E-12:33:1:1:0:23 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:36:16:20:39:92.31%:99:4.2179E-19:42:3:0:3:39 1/1:41:37:26:11:37:94.87%:99:3.0128E-20:35:2:1:1:39 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:22:8:14:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:38:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:19:22:43:95.35%:99:1.4915E-22:34:2:2:0:43 1/1:40:42:20:22:43:97.67%:99:6.6289E-24:37:1:1:0:43 0/1:48:15:6:9:17:88.24%:71:7.3277E-8:35:2:1:1:17 1/1:47:38:22:16:41:92.68%:99:3.1178E-20:33:3:1:2:41 1/1:43:41:15:26:42:97.62%:99:2.5612E-23:33:1:1:0:42 1/1:41:45:19:26:49:91.84%:99:1.1493E-23:32:4:1:3:49 1/1:38:36:16:20:36:94.74%:99:1.1316E-19:33:2:0:2:38 MTB_anc 2882537 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2563_Rv2563|gene2623|transcript|Transcript_gene2623|Coding|1/1|c.248C>T|p.Ala83Val|248/1050|248/1050|83/349||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2882537C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2882537C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:51:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:15:16:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:17:7:10:18:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:16:18:35:97.14%:99:3.2089E-19:25:1:1:0:35 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:42:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:58:33:25:59:98.31%:99:2.4634E-33:60:1:0:1:59 1/1:41:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:36:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:60:36:24:61:98.36%:99:1.6176E-34:60:1:0:1:62 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 2885170 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2565_Rv2565|gene2625|transcript|Transcript_gene2625|Coding|1/1|c.560C>A|p.Ala187Glu|560/1752|560/1752|187/583||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2885170C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2885170C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:47:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:14:21:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:52 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:12:23:36:97.22%:99:8.3613E-20:32:1:0:1:37 1/1:47:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:62:23:39:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:41:19:22:42:97.62%:99:2.5612E-23:37:1:0:1:43 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 MTB_anc 2886570 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2566_Rv2566|gene2626|transcript|Transcript_gene2626|Coding|1/1|c.198G>A|p.Glu66Glu|198/3423|198/3423|66/1140||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2886570G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2886570G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:52:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:25:12:13:26:96.15%:99:5.4444E-14:60:1:1:0:29 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:51:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:14:18:33:96.97%:99:4.7095E-18:60:1:0:1:35 1/1:47:65:26:39:65:100%:99:1.0519E-38:0:0:0:0:68 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:51:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:65:37:28:65:100%:99:1.0519E-38:0:0:0:0:69 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:71:33:38:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:41:60:31:29:60:100%:99:1.035E-35:0:0:0:0:66 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:60:33:27:60:100%:99:1.035E-35:0:0:0:0:60 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 2894208 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv2569c_Rv2569c|gene2629|transcript|Transcript_gene2629|Coding|1/1|c.201T>G|p.Ser67Arg|201/945|201/945|67/314||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2894208A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2894208A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:47:49:24:25:49 0/0:0:0:0:0:15:0%:29:1E0:48:15:5:10:15 0/0:0:0:0:0:50:0%:92:1E0:44:50:32:18:50 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:35 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:7:12:20 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:41 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:17 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:21 0/0:0:0:0:0:14:0%:25:1E0:45:14:5:9:14 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:24 0/0:0:0:0:0:45:0%:85:1E0:41:45:17:28:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:48 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:39 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:26 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:24:0%:44:1E0:47:24:8:16:25 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:60:1:1:0:30:3.33%:44:5E-1:49:29:17:12:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:17:23:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:56:0%:99:1E0:45:56:27:29:56 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:38 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:40 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:7:18:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:20:0%:36:1E0:46:20:3:17:21 0/0:0:0:0:0:45:0%:85:1E0:44:45:31:14:47 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:36 0/0:0:0:0:0:32:0%:59:1E0:48:32:10:22:34 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:20 0/0:0:0:0:0:50:0%:92:1E0:41:50:22:28:52 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:23 0/0:0:0:0:0:57:0%:99:1E0:42:57:30:27:58 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:51:0%:97:1E0:42:51:23:28:51 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:50 0/0:0:0:0:0:20:0%:36:1E0:42:20:7:13:21 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:42 0/0:0:0:0:0:60:0%:99:1E0:44:60:30:30:61 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:50 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:34 0/0:0:0:0:0:22:0%:40:1E0:50:22:7:15:22 0/0:38:1:0:1:15:6.67%:21:5E-1:45:14:9:5:16 0/0:0:0:0:0:33:0%:63:1E0:52:33:18:15:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:39 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:32:0%:59:1E0:46:32:22:10:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:48 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:46 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:29 0/0:0:0:0:0:22:0%:40:1E0:45:22:5:17:22 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:41:0%:78:1E0:40:41:16:25:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:21:0%:40:1E0:42:21:15:6:21 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:18 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:26 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:21 0/0:0:0:0:0:24:0%:44:1E0:47:24:6:18:24 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:21:8:30 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:45 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:33 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:18 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:50 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:55 0/0:0:0:0:0:33:0%:63:1E0:39:33:11:22:34 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 0/0:0:0:0:0:38:0%:70:1E0:40:38:25:13:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:32 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:40 0/0:0:0:0:0:40:0%:74:1E0:38:40:19:21:41 0/0:0:0:0:0:33:0%:63:1E0:40:33:23:10:34 0/0:0:0:0:0:45:0%:85:1E0:40:45:20:25:47 0/0:0:0:0:0:41:0%:78:1E0:37:41:18:23:41 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:40 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:46 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:55:0%:99:1E0:40:55:23:32:56 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:14:27:43 0/0:0:0:0:0:39:0%:74:1E0:37:39:21:18:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:9:22:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:35 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:46 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 MTB_anc 2895842 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv2571c_Rv2571c|gene2631|transcript|Transcript_gene2631|Coding|1/1|c.119T>G|p.Leu40Arg|119/1068|119/1068|40/355||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2895842A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2895842A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:31 0/0:0:0:0:0:23:0%:44:1E0:52:23:10:13:24 0/0:0:0:0:0:47:0%:89:1E0:46:47:23:24:48 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:51:27:11:16:27 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:29 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:24 0/0:0:0:0:0:47:0%:89:1E0:46:47:26:21:47 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:23:0%:44:1E0:50:23:8:15:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:44 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:34 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:19 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:16:0%:29:1E0:43:16:7:9:16 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:50:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:59:0%:99:1E0:45:59:23:36:60 0/0:0:0:0:0:58:0%:99:1E0:46:58:27:31:59 0/0:0:0:0:0:47:0%:89:1E0:47:47:19:28:48 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:47 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:44 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:38 0/0:0:0:0:0:12:0%:21:1E0:54:12:5:7:12 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:29 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:24 0/1:45:11:7:4:37:29.73%:36:2.0455E-4:45:26:12:14:38 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:45 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:17 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:22 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:43 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:19 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:37 0/0:0:0:0:0:56:0%:99:1E0:45:56:31:25:56 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:16 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:16 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:18 0/0:0:0:0:0:39:0%:74:1E0:49:39:25:14:39 0/0:0:0:0:0:44:0%:81:1E0:42:44:27:17:46 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:35 0/0:0:0:0:0:27:0%:52:1E0:48:27:5:22:28 0/0:0:0:0:0:21:0%:40:1E0:49:21:6:15:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:42 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:38 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:29 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:53:0%:99:1E0:41:53:31:22:54 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:19 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:38 0/0:0:0:0:0:18:0%:32:1E0:50:18:12:6:18 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:28 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:26 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:20 0/0:0:0:0:0:23:0%:44:1E0:44:23:17:6:25 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:18 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:41 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:29 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:39 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:17 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:29 0/0:0:0:0:0:52:0%:96:1E0:39:52:25:27:54 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:40 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:45 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:37 0/0:0:0:0:0:47:0%:89:1E0:40:47:22:25:49 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:39 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:42 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:48:0%:89:1E0:41:48:20:28:48 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:46 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:56:0%:99:1E0:45:56:29:27:56 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:40 MTB_anc 2897871 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|aspS_Rv2572c-Rv2573_Rv2573|gene2632-gene2633|intergenic_region|gene2632-gene2633|||n.2897871G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:51:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:53:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:51:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:50:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 2903926 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|synonymous_variant|LOW|dhaA_Rv2579|gene2639|transcript|Transcript_gene2639|Coding|1/1|c.288G>A|p.Ala96Ala|288/903|288/903|96/300||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2903926G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2903926G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:51:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:28 1/1:50:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 1/1:51:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:28 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:39:1:1:0:28:3.57%:41:5E-1:48:27:14:13:28 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 1/1:46:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:23:0%:44:1E0:53:23:15:8:23 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:39:1:1:0:18:5.56%:24:5E-1:45:17:11:6:18 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:20 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:30 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:30:0%:55:1E0:47:30:20:10:30 1/1:45:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:49:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 0/0:0:0:0:0:53:0%:99:1E0:47:53:34:19:54 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:29 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:39 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:43 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:29 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:34:0%:62:1E0:52:34:16:18:35 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:45 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:32:0%:59:1E0:50:32:16:16:32 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:17:19:37:97.3%:99:2.1762E-20:60:1:1:0:37 1/1:45:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:22:10:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:18 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:29 0/0:37:1:1:0:40:2.5%:62:5E-1:48:39:22:17:40 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:0:0:0:0:56:0%:99:1E0:42:56:29:27:57 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:36 0/0:0:0:0:0:63:0%:99:1E0:42:63:24:39:63 0/0:0:0:0:0:55:0%:99:1E0:42:55:27:28:56 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:38 0/0:0:0:0:0:43:0%:82:1E0:38:43:24:19:45 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:47 0/0:0:0:0:0:44:0%:81:1E0:41:44:27:17:44 0/0:0:0:0:0:40:0%:74:1E0:38:40:23:17:42 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:42 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:42 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:43 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:44 0/0:0:0:0:0:42:0%:77:1E0:39:42:26:16:43 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:40 0/0:30:1:0:1:30:3.33%:44:5E-1:40:29:9:20:31 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:32 1/1:37:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:41 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 MTB_anc 2906978 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|ppiB_Rv2582|gene2642|transcript|Transcript_gene2642|Coding|1/1|c.165C>T|p.Leu55Leu|165/927|165/927|55/308||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2906978C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.2906978C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:69:35:34:69:100%:99:4.233E-41:0:0:0:0:69 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:44:34:10:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:59:25:34:60:98.33%:99:4.1056E-35:0:0:0:0:61 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:46:33:13:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:24 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:50:32:18:51:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2911379 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv2585c_Rv2585c|gene2645|transcript|Transcript_gene2645|Coding|1/1|c.1299C>T|p.Pro433Pro|1299/1674|1299/1674|433/557||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2911379G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2911379G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:39:50:22:28:52 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:44 0/0:0:0:0:0:18:0%:32:1E0:51:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:42:0%:77:1E0:48:42:18:24:42 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:19 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:6:18:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:16:0%:29:1E0:52:16:7:9:16 0/0:0:0:0:0:48:0%:89:1E0:45:48:19:29:49 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:18:0%:32:1E0:39:18:12:6:18 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:48 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:60:1:0:1:42:2.38%:66:5E-1:42:40:15:25:42 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:25 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:10:19:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:39:1:1:0:24:4.17%:34:5E-1:42:23:13:10:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:58:0%:99:1E0:46:58:27:31:59 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:52:0%:96:1E0:43:52:22:30:53 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:38 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:21 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:45 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:46 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:13:0%:25:1E0:45:13:7:6:13 0/0:0:0:0:0:41:0%:78:1E0:40:41:28:13:41 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:48:0%:89:1E0:39:48:21:27:48 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:23 0/0:37:1:1:0:50:2%:80:5E-1:42:49:17:32:50 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:42 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:40:0%:74:1E0:40:40:27:13:42 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:19 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:11:0%:22:1E0:53:11:7:4:11 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:50 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:50:0%:92:1E0:41:50:29:21:50 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:34 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:50:0%:92:1E0:42:50:23:27:51 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:22:0%:40:1E0:45:22:15:7:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:20:7:27 0/0:0:0:0:0:20:0%:36:1E0:50:20:8:12:20 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:47 0/0:60:1:1:0:24:4.17%:34:5E-1:43:23:12:11:24 0/0:0:0:0:0:51:0%:97:1E0:45:51:22:29:52 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:12:27:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:10:21:31 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:31 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:18 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:39 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:49 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:33 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:45:0%:85:1E0:38:45:24:21:45 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:50:0%:92:1E0:37:50:27:23:52 0/0:0:0:0:0:47:0%:89:1E0:41:47:31:16:49 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:37:0%:70:1E0:37:37:21:16:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:13:27:40 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:43 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 0/0:0:0:0:0:47:0%:89:1E0:37:47:21:26:48 0/0:39:1:1:0:30:3.33%:44:5E-1:44:29:13:16:31 0/0:38:1:1:0:38:2.63%:58:5E-1:40:37:21:16:38 0/0:0:0:0:0:44:0%:81:1E0:38:44:23:21:46 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:25 0/0:0:0:0:0:49:0%:93:1E0:40:49:21:28:50 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:19 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:58:0%:99:1E0:42:58:21:37:59 0/0:39:1:1:0:33:3.03%:52:5E-1:41:32:18:14:34 MTB_anc 2917848 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|intergenic_region|MODIFIER|gabT_Rv2589-fadD9_Rv2590|gene2649-gene2650|intergenic_region|gene2649-gene2650|||n.2917848T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:45:59:31:28:61 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:26:0%:47:1E0:49:26:16:10:26 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:19 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:36 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:12:22:34 0/0:0:0:0:0:48:0%:89:1E0:46:48:27:21:49 0/0:0:0:0:0:33:0%:63:1E0:48:33:21:12:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:44 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:21:9:32 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:31 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:19 0/0:0:0:0:0:55:0%:99:1E0:44:55:26:29:57 0/0:0:0:0:0:23:0%:44:1E0:48:23:14:9:23 0/0:0:0:0:0:42:0%:77:1E0:46:42:25:17:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:22:11:34 0/0:0:0:0:0:28:0%:51:1E0:50:28:11:17:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:32 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:48 0/0:0:0:0:0:25:0%:48:1E0:40:25:18:7:25 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:28:0%:51:1E0:52:28:15:13:30 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:23 0/0:0:0:0:0:29:0%:55:1E0:50:29:13:16:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:63:0%:99:1E0:48:63:32:31:63 0/0:0:0:0:0:32:0%:59:1E0:51:32:18:14:33 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:52 0/1:41:25:13:12:42:59.52%:97:1.6529E-10:43:17:9:8:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:52:0%:96:1E0:44:52:28:24:52 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:47 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:44 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:43:0%:82:1E0:44:43:17:26:44 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:21:30:52 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:43 0/0:0:0:0:0:50:0%:92:1E0:44:50:29:21:51 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:40:0%:74:1E0:49:40:14:26:41 0/0:0:0:0:0:55:0%:99:1E0:46:55:28:27:55 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:23 0/0:0:0:0:0:49:0%:93:1E0:48:49:29:20:50 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:32:0%:59:1E0:48:32:12:20:34 0/0:0:0:0:0:10:0%:17:1E0:47:10:3:7:10 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:30 0/0:0:0:0:0:55:0%:99:1E0:45:55:33:22:57 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:35 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:14:27:44 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:32 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:17 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:38 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:38 0/0:0:0:0:0:18:0%:32:1E0:51:18:9:9:18 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:42 0/0:0:0:0:0:29:0%:55:1E0:50:29:19:10:30 0/0:0:0:0:0:51:0%:97:1E0:41:51:19:32:53 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:51 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:24 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:41 0/0:0:0:0:0:40:0%:74:1E0:48:40:16:24:42 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:57:0%:99:1E0:44:57:24:33:58 0/0:0:0:0:0:49:0%:93:1E0:41:49:32:17:50 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:29 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:48 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:40 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:51 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:45 0/0:0:0:0:0:48:0%:89:1E0:41:48:31:17:51 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:43 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:46 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:39 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:48 0/0:0:0:0:0:38:0%:70:1E0:38:38:18:20:38 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:48 0/0:0:0:0:0:24:0%:44:1E0:38:24:17:7:26 0/0:0:0:0:0:38:0%:70:1E0:39:38:15:23:38 0/0:0:0:0:0:51:0%:97:1E0:39:51:25:26:53 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:43 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:44 0/0:0:0:0:0:32:0%:59:1E0:47:32:11:21:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:30 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:44 0/0:0:0:0:0:53:0%:99:1E0:46:53:31:22:55 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 MTB_anc 2921541 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|fadD9_Rv2590-PE_PGRS44_Rv2591|gene2650-gene2651|intergenic_region|gene2650-gene2651|||n.2921541A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:42:18:24:43:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:19:12:7:20:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:35:18:17:36:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:17:17:35:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:28:12:16:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:56:30:26:57:100%:99:2.5602E-33:0:0:0:0:58 1/1:47:41:19:22:42:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:38:20:18:39:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:40:22:18:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:62:36:26:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:28 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:50:25:25:51:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:40:21:19:41:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:35:18:17:36:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:35:19:16:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:49:21:28:50:100%:99:3.925E-29:0:0:0:0:52 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:16:10:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:41:64:27:37:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:37:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:49:21:28:50:100%:99:3.925E-29:0:0:0:0:51 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:44:19:25:45:97.78%:99:3.8097E-26:0:0:0:0:46 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:42:22:20:43:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:17:16:34:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 2922984 . C T . PASS AC=294;AF=1.00;AN=294;ANN=T|synonymous_variant|LOW|PE_PGRS44_Rv2591|gene2651|transcript|Transcript_gene2651|Coding|1/1|c.1434C>T|p.Gly478Gly|1434/1632|1434/1632|478/543||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2922984C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2922984C>T||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:24:3:21:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:28:4:24:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:41:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:12:2:10:13:92.31%:58:1.3461E-6:37:1:0:1:15 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:24:8:16:24:100%:99:3.101E-14:0:0:0:0:28 1/1:38:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:13:1:12:14:92.86%:64:3.7391E-7:37:1:0:1:14 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:29:4:25:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:34:6:28:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:26:3:23:26:100%:99:2.0165E-15:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:29:4:25:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:23 1/1:36:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:38:8:30:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 MTB_anc 2925922 . G C . PASS AC=32;AF=0.107;AN=300;ANN=C|missense_variant|MODERATE|vapC40_Rv2596|gene2656|transcript|Transcript_gene2656|Coding|1/1|c.189G>C|p.Leu63Phe|189/405|189/405|63/134||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2925922G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2925922G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:51 0/0:0:0:0:0:14:0%:25:1E0:51:14:9:5:14 1/1:44:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:34:0%:62:1E0:49:34:12:22:34 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:39:1:0:1:29:3.45%:45:5E-1:48:28:12:16:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:48:0%:89:1E0:46:48:24:24:48 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:23 0/0:0:0:0:0:47:0%:89:1E0:44:47:18:29:47 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:9:25:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:12:27:39 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:34 0/0:0:0:0:0:52:0%:96:1E0:43:52:17:35:52 0/0:0:0:0:0:39:0%:74:1E0:47:39:15:24:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:40 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:36 0/0:0:0:0:0:23:0%:44:1E0:53:23:12:11:25 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:60:1:0:1:37:2.7%:59:5E-1:44:36:22:14:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:9:20:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:31 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:32 0/0:0:0:0:0:50:0%:92:1E0:46:50:31:19:52 1/1:48:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:46:0%:85:1E0:42:46:17:29:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:43 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:39:1:1:0:51:1.96%:84:5E-1:47:50:23:27:52 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:37:1:1:0:28:3.57%:41:5E-1:43:27:13:14:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:37:1:0:1:44:2.27%:69:5E-1:43:43:24:19:45 0/0:0:0:0:0:52:0%:96:1E0:45:52:23:29:52 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:41 0/0:0:0:0:0:20:0%:36:1E0:50:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:48:28:6:22:30 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:42:0%:77:1E0:47:42:16:26:42 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:49:0%:93:1E0:44:49:14:35:50 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:43 1/1:47:27:14:13:28:96.43%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:10:25:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:30 0/0:0:0:0:0:37:0%:70:1E0:48:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:50 0/0:0:0:0:0:44:0%:81:1E0:47:44:16:28:44 0/0:0:0:0:0:53:0%:99:1E0:45:53:20:33:53 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:39:2:2:0:50:4%:70:2.4747E-1:44:48:18:30:51 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:37:1:1:0:37:2.7%:59:5E-1:43:36:11:25:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:43:0%:82:1E0:45:43:16:27:44 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:12:23:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:44 1/1:40:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:48:16:32:48:100%:99:1.554E-28:0:0:0:0:50 0/0:0:0:0:0:31:0%:59:1E0:41:31:9:22:33 0/0:39:1:1:0:45:2.22%:73:5E-1:42:44:21:23:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:56:0%:99:1E0:44:56:24:32:59 0/0:0:0:0:0:56:0%:99:1E0:42:56:23:33:58 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:0:0:0:0:12:0%:21:1E0:40:12:5:7:13 0/0:0:0:0:0:60:0%:99:1E0:42:60:25:35:60 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:44 1/1:44:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:47:20:27:48:97.92%:99:6.1512E-28:0:0:0:0:48 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:41:0%:78:1E0:41:41:12:29:41 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:41 0/0:0:0:0:0:52:0%:96:1E0:42:52:18:34:54 1/1:40:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:46:0%:85:1E0:39:46:26:20:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:37:1:1:0:43:2.33%:70:5E-1:42:42:22:20:44 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:40 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 1/1:42:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:34:0%:62:1E0:41:34:11:23:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:15:27:42 0/0:0:0:0:0:65:0%:99:1E0:43:65:25:40:66 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 MTB_anc 2925962 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|vapC40_Rv2596|gene2656|transcript|Transcript_gene2656|Coding|1/1|c.229C>T|p.Arg77Cys|229/405|229/405|77/134||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2925962C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.2925962C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:55:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:47:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:31:18:13:32:96.88%:99:1.8007E-17:37:1:1:0:32 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:11:23:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:33:15:18:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:51:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:52:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:54:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:63:26:37:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2927015 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2598_Rv2598|gene2658|transcript|Transcript_gene2658|Coding|1/1|c.30G>A|p.Pro10Pro|30/495|30/495|10/164||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2927015G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2927015G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:52:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:64:42:22:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:43:22:21:44:97.73%:99:1.7144E-24:32:1:1:0:44 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:14:21:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:51:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:13:18:32:96.88%:99:1.8007E-17:60:1:1:0:33 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 2927511 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2599_Rv2599|gene2659|transcript|Transcript_gene2659|Coding|1/1|c.35T>G|p.Ile12Ser|35/432|35/432|12/143||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2927511T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2927511T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:55 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:31:13:18:32:96.88%:99:1.8007E-17:39:1:0:1:33 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:52:26:26:53:98.11%:99:8.609E-30:37:1:0:1:54 1/1:43:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:53:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:43:18:25:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:49:26:23:50:98%:99:5.0549E-28:39:1:0:1:50 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:40:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:62:26:36:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:57:30:27:58:98.28%:99:6.4572E-34:0:0:0:0:62 1/1:38:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:49:14:35:49:100%:99:3.925E-29:0:0:0:0:50 1/1:38:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:37:17:20:38:97.37%:99:5.6582E-21:37:1:1:0:38 1/1:41:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:47:15:32:49:95.92%:99:5.0044E-26:38:2:1:1:49 1/1:41:53:17:36:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 MTB_anc 2935094 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|PPE42_Rv2608|gene2669|transcript|Transcript_gene2669|Coding|1/1|c.49G>A|p.Ala17Thr|49/1743|49/1743|17/580||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2935094G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2935094G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:42:45:30:15:45 0/0:0:0:0:0:12:0%:21:1E0:46:12:8:4:12 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:37 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:23 0/0:60:1:0:1:32:3.12%:48:5E-1:46:31:14:17:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:21:9:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:22 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:50 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:31 0/0:0:0:0:0:20:0%:36:1E0:48:20:8:12:20 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:21 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:22:0%:40:1E0:51:22:10:12:23 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:48 0/0:38:1:1:0:20:5%:27:5E-1:46:19:9:10:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:12:0%:21:1E0:45:12:7:5:12 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:44 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:45 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:36:0%:66:1E0:50:36:16:20:36 0/0:0:0:0:0:48:0%:89:1E0:45:48:20:28:49 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:44 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:28 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:47:0%:89:1E0:44:47:17:30:48 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:43 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:42 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:47:0%:89:1E0:46:47:25:22:47 0/0:0:0:0:0:14:0%:25:1E0:50:14:8:6:14 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:19:0%:37:1E0:49:19:14:5:19 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:21 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:41 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:38:1:1:0:29:3.45%:45:5E-1:40:28:10:18:30 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:37:0%:70:1E0:50:37:21:16:38 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:14:0%:25:1E0:45:14:5:9:14 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:49 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:22 0/0:0:0:0:0:18:0%:32:1E0:39:18:11:7:18 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:52:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:38 0/0:0:0:0:0:17:0%:33:1E0:49:17:5:12:17 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:43 0/0:0:0:0:0:43:0%:82:1E0:43:43:27:16:43 0/0:0:0:0:0:25:0%:48:1E0:49:25:16:9:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:17:0%:33:1E0:42:17:13:4:17 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:14:0%:25:1E0:43:14:4:10:14 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:49:0%:93:1E0:39:49:24:25:50 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:15 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:21 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:17 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:20:5:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:42 0/0:0:0:0:0:51:0%:97:1E0:39:51:27:24:51 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:46:0%:85:1E0:38:46:22:24:47 0/0:0:0:0:0:53:0%:99:1E0:44:53:31:22:53 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:21 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:37 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:12:24:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:28 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:36 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:35 0/0:0:0:0:0:65:0%:99:1E0:39:65:31:34:66 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:41:0%:78:1E0:43:41:13:28:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:17:0%:33:1E0:42:17:6:11:17 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:54 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 MTB_anc 2944739 . C T . PASS AC=22;AF=0.075;AN=294;ANN=T|missense_variant|MODERATE|PE_PGRS45_Rv2615c|gene2677|transcript|Transcript_gene2677|Coding|1/1|c.247G>A|p.Gly83Ser|247/1386|247/1386|83/461||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2944739C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2944739C>T||||||;HOM=0;set=filterInvariant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:11:11:0:40:27.5%:36:2.2064E-4:39:29:17:12:41 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:41:0%:78:1E0:39:41:34:7:41 0/0:38:3:3:0:13:23.08%:9:1.1E-1:38:10:6:4:13 0/0:0:0:0:0:31:0%:59:1E0:38:31:24:7:32 0/0:0:0:0:0:15:0%:29:1E0:37:15:12:3:15 0/1:37:6:6:0:14:42.86%:20:7.971E-3:44:8:5:3:14 0/0:37:1:1:0:19:5.26%:28:5E-1:40:18:12:6:19 0/1:37:6:6:0:13:46.15%:21:7.4534E-3:40:7:5:2:13 0/1:37:7:7:0:22:31.82%:23:4.4505E-3:41:15:11:4:22 0/0:0:0:0:0:13:0%:25:1E0:39:13:9:4:13 0/1:38:10:10:0:46:21.74%:32:5.6532E-4:40:36:21:15:48 0/0:37:2:2:0:8:25%:5:2.3333E-1:42:6:4:2:8 0/1:37:11:11:0:36:30.56%:37:1.9879E-4:40:25:14:11:37 0/0:0:0:0:0:11:0%:22:1E0:41:11:9:2:11 0/0:0:0:0:0:12:0%:21:1E0:38:12:9:3:12 0/0:39:4:4:0:17:23.53%:11:5.132E-2:37:13:11:2:18 0/0:38:5:5:0:18:27.78%:8:2.2727E-2:37:13:8:5:18 0/0:0:0:0:0:12:0%:21:1E0:38:12:8:4:12 0/0:0:0:0:0:19:0%:37:1E0:38:19:14:5:19 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/1:38:9:9:0:35:25.71%:29:1.0857E-3:40:26:18:8:35 0/0:37:2:2:0:12:16.67%:10:2.3913E-1:40:10:8:2:12 0/1:39:7:7:0:29:24.14%:22:5.1909E-3:40:22:16:6:29 0/0:37:6:6:0:23:26.09%:11:1.0777E-2:39:17:7:10:23 0/0:0:0:0:0:7:0%:14:1E0:41:7:3:4:7 0/0:38:5:5:0:22:22.73%:12:2.4248E-2:41:17:11:6:22 0/0:33:1:1:0:9:11.11%:11:5E-1:37:8:7:1:9 0/0:36:2:2:0:13:15.38%:13:2.4E-1:42:11:7:4:13 0/0:0:0:0:0:26:0%:47:1E0:37:26:18:8:26 0/0:38:3:3:0:16:18.75%:11:1.129E-1:37:13:9:4:17 0/0:0:0:0:0:24:0%:44:1E0:39:24:18:6:24 0/0:0:0:0:0:9:0%:18:1E0:38:9:9:0:10 0/0:38:3:3:0:27:11.11%:28:1.1792E-1:38:24:13:11:28 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:23 0/1:38:8:8:0:29:27.59%:26:2.2392E-3:38:21:14:7:29 0/0:38:6:6:0:22:27.27%:9:1.057E-2:38:16:11:5:22 0/1:37:13:13:0:35:37.14%:45:3.1103E-5:37:22:16:6:35 0/0:0:0:0:0:20:0%:36:1E0:39:20:15:5:21 0/1:38:9:9:0:29:31.03%:30:9.4048E-4:37:20:16:4:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:18:5:23 0/0:39:4:4:0:20:20%:13:5.3015E-2:39:16:12:4:20 0/0:39:2:2:0:19:10.53%:21:2.4324E-1:37:17:9:8:20 0/0:38:5:5:0:18:27.78%:8:2.2727E-2:38:13:10:3:19 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:21 0/1:38:11:11:0:31:35.48%:37:1.6659E-4:38:20:12:8:31 0/0:38:1:1:0:13:7.69%:18:5E-1:39:12:10:2:13 0/1:37:8:8:0:27:29.63%:26:2.1337E-3:40:19:14:5:27 0/1:37:10:10:0:36:27.78%:33:4.7404E-4:39:26:18:8:36 0/0:39:3:3:0:20:15%:16:1.1538E-1:38:17:11:6:20 0/0:37:1:1:0:7:14.29%:8:5E-1:38:6:2:4:7 0/0:0:0:0:0:26:0%:47:1E0:40:26:20:6:26 0/0:39:4:4:0:14:28.57%:6:4.8889E-2:40:10:9:1:15 0/0:37:6:6:0:20:30%:7:1.0098E-2:38:14:8:6:20 0/0:38:3:3:0:13:23.08%:9:1.1E-1:37:10:3:7:13 0/1:38:10:10:0:32:31.25%:33:4.259E-4:37:22:14:8:33 0/1:37:8:8:0:26:30.77%:26:2.076E-3:38:18:11:7:27 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:15 0/1:38:7:7:0:21:33.33%:23:4.3101E-3:38:14:7:7:21 0/0:36:6:6:0:20:30%:7:1.0098E-2:41:14:10:4:21 0/0:0:0:0:0:22:0%:40:1E0:39:22:17:5:22 0/0:35:6:6:0:32:18.75%:20:1.2087E-2:37:26:15:11:35 0/1:38:8:8:0:36:22.22%:25:2.5282E-3:40:28:18:10:36 0/0:0:0:0:0:17:0%:33:1E0:37:17:12:5:17 0/0:0:0:0:0:28:0%:51:1E0:41:28:21:7:29 0/0:0:0:0:0:37:0%:70:1E0:40:37:31:6:37 0/0:0:0:0:0:28:0%:51:1E0:37:28:21:7:28 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:20 0/0:39:1:1:0:8:12.5%:8:5E-1:43:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:11:11:0:35:31.43%:37:1.9282E-4:39:24:13:11:36 0/0:0:0:0:0:10:0%:17:1E0:39:10:7:3:10 0/0:39:2:2:0:11:18.18%:10:2.381E-1:43:9:4:5:11 0/0:0:0:0:0:19:0%:37:1E0:39:19:15:4:19 0/0:0:0:0:0:33:0%:63:1E0:37:33:22:11:33 0/0:36:2:2:0:9:22.22%:7:2.3529E-1:38:7:3:4:9 0/1:39:8:8:0:39:20.51%:25:2.624E-3:39:31:21:10:40 0/0:38:3:3:0:18:16.67%:14:1.1429E-1:42:15:12:3:18 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:16 0/0:38:6:6:0:29:20.69%:18:1.1736E-2:39:23:16:7:29 0/0:39:5:5:0:13:38.46%:4:1.9565E-2:37:8:7:1:13 0/0:0:0:0:0:28:0%:51:1E0:37:28:21:7:29 0/0:38:4:4:0:16:25%:8:5.0612E-2:40:12:6:6:16 0/0:0:0:0:0:17:0%:33:1E0:40:17:15:2:17 0/0:0:0:0:0:32:0%:59:1E0:38:32:28:4:32 0/0:0:0:0:0:31:0%:59:1E0:37:31:20:11:31 0/0:0:0:0:0:21:0%:40:1E0:40:21:17:4:21 0/0:38:3:3:0:9:33.33%:4:1.0294E-1:38:6:2:4:9 0/0:0:0:0:0:12:0%:21:1E0:37:12:12:0:12 0/0:37:3:3:0:13:23.08%:9:1.1E-1:37:10:9:1:13 0/0:0:0:0:0:19:0%:37:1E0:39:19:18:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:38:5:5:0:33:15.15%:27:2.6557E-2:39:28:20:8:34 0/0:38:4:4:0:16:25%:8:5.0612E-2:41:12:7:5:17 0/0:37:6:6:0:31:19.35%:20:1.1977E-2:37:25:16:9:31 0/0:39:3:3:0:15:20%:11:1.1207E-1:37:12:7:5:15 0/0:0:0:0:0:19:0%:37:1E0:38:19:14:5:20 0/0:0:0:0:0:21:0%:40:1E0:37:21:14:7:21 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:36 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:17:8:25 0/0:0:0:0:0:25:0%:48:1E0:38:25:19:6:25 0/0:0:0:0:0:39:0%:74:1E0:38:39:27:12:41 0/0:0:0:0:0:23:0%:44:1E0:37:23:17:6:23 0/0:0:0:0:0:21:0%:40:1E0:39:21:16:5:21 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:22 0/0:0:0:0:0:14:0%:25:1E0:37:14:11:3:14 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:16 0/0:0:0:0:0:20:0%:36:1E0:40:20:17:3:20 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:25:2:27 0/0:0:0:0:0:17:0%:33:1E0:37:17:11:6:17 0/0:37:1:1:0:17:5.88%:24:5E-1:37:16:14:2:17 0/0:0:0:0:0:29:0%:55:1E0:39:29:24:5:29 0/0:37:1:1:0:26:3.85%:38:5E-1:38:25:19:6:26 0/0:0:0:0:0:36:0%:66:1E0:37:36:25:11:37 0/0:37:1:1:0:35:2.86%:55:5E-1:37:34:18:16:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:24 0/0:0:0:0:0:15:0%:29:1E0:39:15:10:5:15 0/0:0:0:0:0:38:0%:70:1E0:38:38:30:8:39 0/0:38:1:1:0:37:2.7%:59:5E-1:39:36:33:3:37 0/0:0:0:0:0:20:0%:36:1E0:38:20:16:4:20 0/0:39:1:1:0:21:4.76%:31:5E-1:37:20:15:5:21 0/0:0:0:0:0:35:0%:67:1E0:38:35:27:8:37 0/0:0:0:0:0:33:0%:63:1E0:37:33:24:9:33 0/0:0:0:0:0:41:0%:78:1E0:38:41:34:7:43 0/0:0:0:0:0:35:0%:67:1E0:37:35:24:11:36 0/0:0:0:0:0:33:0%:63:1E0:37:33:23:10:34 0/0:39:1:1:0:35:2.86%:55:5E-1:38:34:28:6:35 0/0:0:0:0:0:33:0%:63:1E0:38:33:28:5:34 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:35 0/0:0:0:0:0:38:0%:70:1E0:38:38:30:8:39 0/0:0:0:0:0:36:0%:66:1E0:38:36:28:8:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:25:8:35 0/0:0:0:0:0:28:0%:51:1E0:37:28:22:6:28 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:29 0/1:38:9:9:0:51:17.65%:28:1.3283E-3:38:42:28:14:51 0/0:38:5:5:0:20:25%:10:2.3562E-2:37:15:9:6:20 0/0:39:3:3:0:23:13.04%:22:1.1667E-1:37:20:11:9:23 0/0:0:0:0:0:34:0%:62:1E0:37:34:20:14:35 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:24 0/0:0:0:0:0:12:0%:21:1E0:38:12:7:5:12 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:0:0:0:0:30:0%:55:1E0:38:30:20:10:30 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:14 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:12 0/0:0:0:0:0:24:0%:44:1E0:40:24:20:4:24 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:34 0/1:38:9:9:0:41:21.95%:29:1.1955E-3:38:32:21:11:41 0/0:38:2:2:0:16:12.5%:15:2.4194E-1:39:14:7:7:16 MTB_anc 2945042 . C G . PASS AC=295;AF=0.983;AN=300;ANN=G|intergenic_region|MODIFIER|PE_PGRS45_Rv2615c-Rv2616_Rv2616|gene2677-gene2678|intergenic_region|gene2677-gene2678|||n.2945042C>G||||||;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:26:9:17:27:96.3%:99:1.4382E-14:34:1:1:0:27 1/1:36:34:7:27:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:28:8:20:29:96.55%:99:9.9776E-16:30:1:0:1:29 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:38:45:6:39:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:42:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:58:18:40:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:39:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:51:13:38:52:98.08%:99:3.3479E-29:30:1:0:1:53 1/1:39:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:35:7:28:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:15:5:10:16:93.75%:75:2.8282E-8:31:1:0:1:16 1/1:42:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:19:8:11:20:95%:98:1.5234E-10:37:1:0:1:20 1/1:38:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:51:12:39:52:98.08%:99:3.3479E-29:35:1:0:1:53 1/1:41:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:40:11:29:41:97.56%:99:9.8874E-23:32:1:0:1:43 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:33:11:22:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:38:19:7:12:20:95%:98:1.5234E-10:38:1:0:1:20 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:38:7:31:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:40:8:32:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:46:9:37:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:8:21:30:96.67%:99:2.6212E-16:37:1:0:1:30 1/1:41:34:8:26:36:94.44%:99:1.5887E-18:32:2:0:2:36 1/1:38:54:18:36:55:98.18%:99:5.6837E-31:37:1:0:1:57 1/1:38:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:16:6:10:17:94.12%:81:7.7134E-9:74:1:1:0:18 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:40:7:33:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:12:4:8:13:92.31%:64:3.698E-7:0:0:0:0:13 1/1:40:28:8:20:29:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:38:37:7:30:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:41:11:30:42:97.62%:99:2.5612E-23:37:1:0:1:42 1/1:41:37:8:29:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:36:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 0/1:36:6:0:6:19:31.58%:20:9.828E-3:42:13:5:8:19 1/1:40:38:13:25:40:95%:99:8.0088E-21:37:2:0:2:41 1/1:42:32:9:23:33:96.97%:99:4.7095E-18:37:1:0:1:33 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:30:7:23:31:96.77%:99:6.8754E-17:37:1:0:1:32 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:29:7:22:30:96.67%:99:2.6212E-16:37:1:0:1:30 1/1:44:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:60:24:36:60:100%:99:1.035E-35:0:0:0:0:60 1/1:37:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:38:12:26:39:97.44%:99:1.4697E-21:37:1:0:1:40 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:23:5:18:24:95.83%:99:7.7525E-13:26:1:0:1:25 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:40:14:26:42:95.24%:99:5.6346E-22:34:2:0:2:42 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:45:9:36:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:32:5:27:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:23:9:14:24:95.83%:99:7.7525E-13:37:1:0:1:25 1/1:40:26:9:17:27:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:36:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:9:27:37:97.3%:99:2.1762E-20:37:1:0:1:37 1/1:36:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:45:8:37:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:53:17:36:54:98.15%:99:2.2126E-30:31:1:0:1:55 1/1:39:64:18:46:66:96.97%:99:6.0362E-36:33:2:0:2:66 1/1:38:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:26:2:24:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:43:11:32:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:59:15:44:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:35:42:12:30:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:36:45:17:28:47:95.74%:99:7.2338E-25:36:2:0:2:50 1/1:38:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:40:9:31:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:41:7:34:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:55:18:37:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:36:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:68:21:47:69:98.55%:99:2.9631E-39:37:1:0:1:70 1/1:37:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:36:4:0:4:15:26.67%:8:4.9808E-2:39:11:3:8:16 0/0:38:3:0:3:15:20%:11:1.1207E-1:41:12:5:7:16 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:48:8:40:49:97.96%:99:1.9625E-27:37:1:0:1:50 1/1:37:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 2945044 . C T . PASS AC=3;AF=0.010;AN=300;ANN=T|intergenic_region|MODIFIER|PE_PGRS45_Rv2615c-Rv2616_Rv2616|gene2677-gene2678|intergenic_region|gene2677-gene2678|||n.2945044C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:38:45:15:30:47 0/0:0:0:0:0:12:0%:21:1E0:45:12:5:7:15 0/0:0:0:0:0:46:0%:85:1E0:40:46:13:33:47 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:27 0/0:0:0:0:0:34:0%:62:1E0:36:34:7:27:34 0/0:33:1:0:1:29:3.45%:45:5E-1:38:28:8:20:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:29 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:18 0/0:0:0:0:0:22:0%:40:1E0:39:22:3:19:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:9:23:33 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:28 0/0:0:0:0:0:45:0%:85:1E0:38:45:6:39:47 0/0:0:0:0:0:10:0%:17:1E0:42:10:3:7:10 0/0:0:0:0:0:58:0%:99:1E0:41:58:17:41:61 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:21 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:17 0/0:0:0:0:0:29:0%:55:1E0:38:29:8:21:31 0/0:0:0:0:0:17:0%:33:1E0:36:17:6:11:18 0/0:0:0:0:0:18:0%:32:1E0:37:18:5:13:18 0/0:0:0:0:0:19:0%:37:1E0:40:19:4:15:21 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:24 0/0:28:1:0:1:52:1.92%:83:5E-1:38:51:13:38:54 0/0:0:0:0:0:18:0%:32:1E0:39:18:3:15:19 0/0:0:0:0:0:35:0%:67:1E0:38:35:7:28:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:8:22:33 0/0:0:0:0:0:11:0%:22:1E0:41:11:4:7:11 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:30 0/0:0:0:0:0:19:0%:37:1E0:43:19:4:15:19 0/0:32:1:0:1:15:6.67%:21:5E-1:39:14:5:9:16 0/0:0:0:0:0:27:0%:52:1E0:42:27:6:21:28 0/0:37:1:0:1:20:5%:27:5E-1:37:19:8:11:20 0/0:0:0:0:0:25:0%:48:1E0:38:25:5:20:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:5:16:22 0/0:0:0:0:0:26:0%:47:1E0:39:26:7:19:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:8:24:34 0/0:0:0:0:0:32:0%:59:1E0:39:32:10:22:32 0/0:0:0:0:0:39:0%:74:1E0:38:39:12:27:40 0/0:0:0:0:0:50:0%:92:1E0:38:50:12:38:53 0/0:0:0:0:0:42:0%:77:1E0:42:42:14:28:44 0/0:32:1:0:1:42:2.38%:66:5E-1:40:41:11:30:43 0/0:0:0:0:0:38:0%:70:1E0:38:38:14:24:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:34 0/0:38:1:0:1:19:5.26%:28:5E-1:38:18:7:11:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 0/0:0:0:0:0:30:0%:55:1E0:40:30:8:22:30 0/0:0:0:0:0:15:0%:29:1E0:38:15:3:12:15 0/0:0:0:0:0:36:0%:66:1E0:39:36:7:29:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:15:26:42 0/0:0:0:0:0:39:0%:74:1E0:41:39:8:31:40 0/0:0:0:0:0:9:0%:18:1E0:40:9:1:8:10 0/0:0:0:0:0:30:0%:55:1E0:38:30:7:23:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:23 0/0:0:0:0:0:40:0%:74:1E0:38:40:13:27:42 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:23 0/0:0:0:0:0:44:0%:81:1E0:38:44:9:35:46 0/0:0:0:0:0:33:0%:63:1E0:38:33:10:23:33 0/0:0:0:0:0:25:0%:48:1E0:37:25:3:22:25 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:5:24:29 0/0:0:0:0:0:29:0%:55:1E0:37:29:12:17:30 0/0:0:0:0:0:39:0%:74:1E0:37:39:13:26:42 0/0:0:0:0:0:36:0%:66:1E0:39:36:10:26:37 0/0:37:1:0:1:30:3.33%:44:5E-1:40:29:8:21:31 0/0:34:2:0:2:36:5.56%:47:2.4648E-1:42:34:8:26:37 0/0:37:1:0:1:54:1.85%:87:5E-1:38:53:19:34:57 0/0:0:0:0:0:33:0%:63:1E0:37:33:11:22:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:30 0/0:64:1:1:0:17:5.88%:24:5E-1:43:16:6:10:18 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:15 0/0:60:1:1:0:40:2.5%:62:5E-1:37:39:7:32:42 0/0:0:0:0:0:12:0%:21:1E0:41:12:4:8:12 0/0:0:0:0:0:13:0%:25:1E0:41:13:5:8:13 0/0:32:1:0:1:29:3.45%:45:5E-1:40:28:8:20:29 0/0:0:0:0:0:39:0%:74:1E0:38:39:8:31:39 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 0/0:37:1:0:1:40:2.5%:62:5E-1:39:39:11:28:42 0/0:0:0:0:0:37:0%:70:1E0:40:37:8:29:37 0/0:0:0:0:0:20:0%:36:1E0:35:20:3:17:20 0/0:0:0:0:0:39:0%:74:1E0:38:39:13:26:40 0/0:0:0:0:0:28:0%:51:1E0:36:28:5:23:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:13:24:37 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:15 0/1:43:11:5:6:16:68.75%:44:3.3854E-5:36:5:0:5:19 0/0:36:2:0:2:40:5%:53:2.4684E-1:40:38:13:25:40 0/0:37:1:0:1:30:3.33%:44:5E-1:43:29:8:21:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:43 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:26 0/0:37:1:0:1:29:3.45%:45:5E-1:38:28:6:22:31 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:16 0/0:37:1:0:1:29:3.45%:45:5E-1:39:28:7:21:29 0/0:0:0:0:0:14:0%:25:1E0:45:14:4:10:15 0/0:0:0:0:0:57:0%:99:1E0:37:57:24:33:60 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:24 0/0:37:1:0:1:38:2.63%:58:5E-1:38:37:13:24:40 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:22 0/0:34:1:0:1:23:4.35%:34:5E-1:39:22:4:18:25 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:11:24:37 0/0:28:2:0:2:40:5%:53:2.4684E-1:38:38:14:24:41 0/0:0:0:0:0:20:0%:36:1E0:37:20:5:15:21 0/0:0:0:0:0:30:0%:55:1E0:37:30:7:23:32 0/0:0:0:0:0:46:0%:85:1E0:39:46:10:36:46 0/0:0:0:0:0:33:0%:63:1E0:37:33:7:26:34 0/0:0:0:0:0:31:0%:59:1E0:38:31:5:26:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:8:23:31 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:24 0/0:0:0:0:0:30:0%:55:1E0:39:30:10:20:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:23 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:25 0/0:37:1:1:0:24:4.17%:34:5E-1:43:23:9:14:27 0/0:0:0:0:0:38:0%:70:1E0:36:38:14:24:38 0/0:37:1:0:1:37:2.7%:59:5E-1:40:36:9:27:37 0/0:0:0:0:0:30:0%:55:1E0:34:30:7:23:31 0/0:0:0:0:0:43:0%:82:1E0:37:43:13:30:46 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:28 0/0:0:0:0:0:43:0%:82:1E0:38:43:7:36:46 0/0:0:0:0:0:25:0%:48:1E0:37:25:7:18:25 0/0:29:1:0:1:51:1.96%:84:5E-1:39:50:17:33:55 0/0:34:2:0:2:63:3.17%:95:2.48E-1:39:61:17:44:66 0/0:0:0:0:0:27:0%:52:1E0:38:27:7:20:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:3:23:29 0/0:0:0:0:0:41:0%:78:1E0:37:41:13:28:41 0/0:0:0:0:0:43:0%:82:1E0:39:43:11:32:44 0/0:0:0:0:0:56:0%:99:1E0:38:56:14:42:60 0/0:0:0:0:0:41:0%:78:1E0:36:41:13:28:44 0/0:0:0:0:0:54:0%:99:1E0:36:54:19:35:55 0/0:31:2:0:2:43:4.65%:60:2.4706E-1:36:41:17:24:49 0/0:0:0:0:0:42:0%:77:1E0:38:42:15:27:44 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:29 0/0:0:0:0:0:41:0%:78:1E0:36:41:9:32:41 0/0:0:0:0:0:39:0%:74:1E0:37:39:6:33:42 0/0:0:0:0:0:50:0%:92:1E0:37:50:15:35:55 0/0:0:0:0:0:30:0%:55:1E0:36:30:8:22:31 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:27 0/0:37:1:1:0:66:1.52%:99:5E-1:36:64:20:44:70 0/0:0:0:0:0:27:0%:52:1E0:38:27:7:20:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:26 0/0:0:0:0:0:42:0%:77:1E0:37:42:14:28:42 0/0:0:0:0:0:34:0%:62:1E0:40:34:10:24:34 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:0:0:0:0:33:0%:63:1E0:39:33:10:23:33 0/1:38:11:3:8:16:68.75%:44:3.3854E-5:36:5:0:5:16 0/1:39:12:6:6:15:80%:52:5.2605E-6:37:3:0:3:16 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:40 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:33 0/0:37:1:0:1:49:2.04%:80:5E-1:37:48:8:40:51 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:30 MTB_anc 2945101 . A G . PASS AC=16;AF=0.053;AN=300;ANN=G|intergenic_region|MODIFIER|PE_PGRS45_Rv2615c-Rv2616_Rv2616|gene2677-gene2678|intergenic_region|gene2677-gene2678|||n.2945101A>G||||||;HOM=0;NC=0;set-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:5:0:5:36:13.89%:29:2.6944E-2:42:31:15:16:37 0/0:34:1:0:1:15:6.67%:21:5E-1:46:14:8:6:15 0/1:38:8:0:8:46:17.39%:25:2.8033E-3:43:38:15:23:46 0/0:37:1:0:1:30:3.33%:44:5E-1:43:29:11:18:30 0/0:38:2:0:2:33:6.06%:44:2.4615E-1:38:31:12:19:33 0/0:38:4:0:4:30:13.33%:26:5.62E-2:44:26:12:14:30 0/0:39:1:0:1:25:4%:38:5E-1:48:24:12:12:25 0/0:39:1:0:1:22:4.55%:31:5E-1:43:21:4:17:22 0/0:37:6:0:6:23:26.09%:11:1.0777E-2:44:17:3:14:24 0/0:38:3:0:3:30:10%:31:1.1864E-1:46:27:10:17:30 0/0:38:2:0:2:25:8%:31:2.449E-1:40:23:10:13:26 0/1:36:8:0:8:47:17.02%:25:2.8249E-3:41:39:12:27:47 0/0:39:3:0:3:15:20%:11:1.1207E-1:46:12:4:8:15 0/1:38:7:0:7:58:12.07%:21:6.4484E-3:43:51:24:27:58 0/0:39:1:0:1:20:5%:27:5E-1:39:19:9:10:20 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:19 0/0:38:1:0:1:20:5%:27:5E-1:42:19:7:12:21 0/0:39:1:0:1:17:5.88%:24:5E-1:42:16:8:8:18 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:13 0/0:38:2:0:2:17:11.76%:18:2.4242E-1:44:15:6:9:18 0/0:38:2:0:2:23:8.7%:28:2.4444E-1:39:21:11:10:26 0/0:38:5:0:5:46:10.87%:44:2.7874E-2:41:41:18:23:47 0/0:38:3:0:3:21:14.29%:19:1.1585E-1:40:18:5:13:21 0/0:35:2:0:2:30:6.67%:37:2.4576E-1:44:28:9:19:31 0/0:38:2:0:2:26:7.69%:30:2.451E-1:42:24:7:17:27 0/0:35:2:0:2:16:12.5%:15:2.4194E-1:42:14:6:8:17 0/0:39:5:0:5:33:15.15%:27:2.6557E-2:44:28:15:13:33 0/0:39:1:0:1:17:5.88%:24:5E-1:46:16:7:9:17 0/0:39:1:0:1:17:5.88%:24:5E-1:39:16:6:10:18 0/0:37:1:0:1:27:3.7%:41:5E-1:44:26:10:16:27 0/0:39:2:0:2:17:11.76%:18:2.4242E-1:42:15:7:8:19 0/0:38:3:0:3:22:13.64%:19:1.1628E-1:44:19:5:14:23 0/0:38:2:0:2:24:8.33%:27:2.4468E-1:41:22:8:14:25 0/0:36:3:0:3:29:10.34%:31:1.1842E-1:42:26:8:18:29 0/0:38:2:0:2:31:6.45%:40:2.459E-1:43:29:12:17:31 0/0:43:4:1:3:33:12.12%:32:5.6777E-2:42:29:11:18:33 0/0:33:1:0:1:37:2.7%:59:5E-1:42:36:16:20:37 0/1:37:9:0:9:50:18%:28:1.3171E-3:46:41:16:25:50 0/1:37:8:0:8:46:17.39%:25:2.8033E-3:44:38:17:21:47 0/0:35:5:0:5:34:14.71%:27:2.6693E-2:45:29:8:21:35 0/0:38:6:0:6:39:15.38%:31:1.2702E-2:40:33:17:16:40 0/0:38:2:0:2:35:5.71%:47:2.4638E-1:42:33:16:17:36 0/0:38:3:1:2:16:18.75%:11:1.129E-1:48:13:7:6:16 0/0:49:2:1:1:22:9.09%:24:2.4419E-1:41:20:12:8:23 0/0:39:2:0:2:23:8.7%:28:2.4444E-1:45:21:10:11:24 0/0:39:2:0:2:27:7.41%:34:2.4528E-1:42:25:9:16:27 0/0:39:2:0:2:16:12.5%:15:2.4194E-1:42:14:5:9:16 0/0:38:5:0:5:40:12.5%:35:2.7371E-2:40:35:8:27:41 0/0:37:5:0:5:45:11.11%:44:2.7799E-2:43:40:17:23:46 0/0:38:3:0:3:35:8.57%:40:1.1957E-1:44:32:10:22:36 0/0:0:0:0:0:8:0%:14:1E0:42:8:2:6:8 0/0:38:2:0:2:29:6.9%:37:2.4561E-1:43:27:10:17:29 0/0:39:2:0:2:24:8.33%:27:2.4468E-1:44:22:10:12:24 0/0:38:4:1:3:40:10%:40:5.7784E-2:39:36:16:20:40 0/0:39:1:0:1:26:3.85%:38:5E-1:42:25:15:10:26 0/0:38:2:0:2:42:4.76%:57:2.4699E-1:41:40:12:28:43 0/0:36:2:0:2:34:5.88%:43:2.4627E-1:41:32:10:22:34 0/0:36:3:0:3:23:13.04%:22:1.1667E-1:38:20:3:17:24 0/0:38:5:0:5:40:12.5%:35:2.7371E-2:43:35:19:16:40 0/0:39:2:0:2:27:7.41%:34:2.4528E-1:43:25:5:20:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:37:3:0:3:32:9.38%:34:1.1905E-1:41:29:16:13:33 0/0:38:6:0:6:41:14.63%:33:1.2841E-2:43:35:13:22:42 0/0:37:4:0:4:26:15.38%:20:5.5222E-2:45:22:7:15:26 0/0:38:4:0:4:31:12.9%:29:5.6405E-2:46:27:9:18:31 0/1:38:9:0:9:58:15.52%:28:1.3968E-3:44:49:22:27:58 0/0:38:5:0:5:33:15.15%:27:2.6557E-2:41:28:9:19:34 0/0:39:1:0:1:24:4.17%:34:5E-1:43:23:11:12:25 0/0:38:3:0:3:17:17.65%:14:1.1364E-1:42:14:7:7:17 0/0:38:2:0:2:16:12.5%:15:2.4194E-1:39:14:8:6:16 0/1:37:8:0:8:35:22.86%:26:2.4931E-3:43:27:10:17:35 0/0:38:1:0:1:11:9.09%:14:5E-1:44:10:4:6:11 0/0:0:0:0:0:11:0%:22:1E0:42:11:4:7:11 0/0:39:2:0:2:22:9.09%:24:2.4419E-1:45:20:10:10:22 0/0:38:6:0:6:41:14.63%:33:1.2841E-2:39:35:16:19:44 0/0:38:1:0:1:17:5.88%:24:5E-1:41:16:7:9:17 0/0:38:5:1:4:33:15.15%:27:2.6557E-2:41:28:11:17:33 0/0:39:4:0:4:32:12.5%:29:5.6596E-2:44:28:9:19:32 0/0:0:0:0:0:19:0%:37:1E0:39:19:6:13:19 0/0:39:1:0:1:31:3.23%:48:5E-1:43:30:10:20:32 0/0:39:1:0:1:27:3.7%:41:5E-1:40:26:8:18:27 0/0:37:2:0:2:35:5.71%:47:2.4638E-1:42:33:15:18:35 0/0:38:3:0:3:15:20%:11:1.1207E-1:44:12:7:5:16 0/0:38:4:0:4:19:21.05%:13:5.251E-2:49:15:7:8:19 0/1:37:7:0:7:35:20%:22:5.6095E-3:40:28:14:14:35 0/1:37:8:0:8:30:26.67%:26:2.2875E-3:43:22:9:13:30 0/0:36:5:0:5:37:13.51%:32:2.706E-2:44:32:15:17:38 0/0:39:1:0:1:24:4.17%:34:5E-1:43:23:10:13:24 0/0:36:2:0:2:24:8.33%:27:2.4468E-1:42:22:12:10:24 0/0:39:1:0:1:15:6.67%:21:5E-1:50:14:9:5:15 0/0:39:5:0:5:28:17.86%:19:2.5729E-2:47:23:8:15:28 0/0:39:1:0:1:17:5.88%:24:5E-1:44:16:8:8:17 0/0:37:4:0:4:57:7.02%:68:5.9196E-2:40:53:24:29:59 0/0:35:2:0:2:21:9.52%:25:2.439E-1:41:19:6:13:22 0/0:39:3:0:3:44:6.82%:53:1.2069E-1:45:41:19:22:44 0/0:39:2:0:2:22:9.09%:24:2.4419E-1:43:20:11:9:22 0/0:38:4:0:4:23:17.39%:18:5.4264E-2:39:19:8:11:24 0/0:39:2:0:2:30:6.67%:37:2.4576E-1:43:28:15:13:31 0/0:36:5:0:5:32:15.62%:24:2.6412E-2:41:27:12:15:32 0/1:39:7:0:7:42:16.67%:22:5.9563E-3:40:35:16:19:42 0/0:39:1:0:1:20:5%:27:5E-1:39:19:7:12:21 0/0:39:3:0:3:26:11.54%:25:1.1765E-1:43:23:8:15:26 0/0:39:2:0:2:39:5.13%:54:2.4675E-1:41:37:15:22:39 0/0:37:1:0:1:23:4.35%:34:5E-1:41:22:8:14:24 0/0:37:5:0:5:27:18.52%:19:2.5527E-2:43:22:7:15:27 0/0:37:3:0:3:27:11.11%:28:1.1792E-1:43:24:8:16:28 0/0:38:2:0:2:25:8%:27:2.4468E-1:37:22:11:11:26 0/0:37:4:0:4:28:14.29%:23:5.5746E-2:44:24:13:11:29 0/0:37:3:0:3:31:9.68%:34:1.1885E-1:43:28:12:16:33 0/0:38:3:0:3:30:10%:31:1.1864E-1:45:27:11:16:31 0/0:37:4:0:4:26:15.38%:20:5.5222E-2:42:22:13:9:27 0/0:38:2:0:2:27:7.41%:34:2.4528E-1:43:25:9:16:27 0/0:35:4:0:4:35:11.43%:35:5.7106E-2:41:31:13:18:35 0/0:37:6:0:6:38:15.79%:28:1.2628E-2:40:32:11:21:39 0/0:37:3:0:3:20:15%:16:1.1538E-1:37:17:9:8:22 0/0:37:4:0:4:44:9.09%:46:5.8215E-2:40:40:17:23:45 0/0:38:4:0:4:32:12.5%:29:5.6596E-2:42:28:14:14:32 0/0:39:2:0:2:42:4.76%:57:2.4699E-1:45:40:11:29:42 0/0:38:3:0:3:22:13.64%:19:1.1628E-1:42:19:8:11:25 0/1:38:7:0:7:53:13.21%:21:6.3251E-3:42:46:23:23:53 0/1:38:9:0:9:62:14.52%:28:1.4297E-3:42:53:20:33:63 0/0:38:4:0:4:26:15.38%:20:5.5222E-2:43:22:9:13:26 0/0:38:2:0:2:25:8%:31:2.449E-1:40:23:2:21:25 0/0:38:2:0:2:41:4.88%:57:2.4691E-1:40:39:19:20:42 0/0:38:4:0:4:42:9.52%:43:5.801E-2:45:38:12:26:42 0/1:38:7:0:7:50:14%:22:6.2398E-3:42:43:18:25:50 0/0:37:3:0:3:45:6.67%:56:1.2079E-1:37:42:17:25:47 0/1:38:7:0:7:48:14.58%:22:6.1774E-3:38:41:23:18:49 0/1:37:9:0:9:43:20.93%:29:1.2263E-3:40:34:15:19:44 0/0:38:2:0:2:41:4.88%:57:2.4691E-1:41:39:19:20:43 0/0:33:3:0:3:28:10.71%:28:1.1818E-1:41:25:12:13:28 0/0:38:3:0:3:37:8.11%:43:1.1986E-1:39:34:13:21:37 0/0:36:3:0:3:33:9.09%:37:1.1923E-1:41:30:11:19:33 0/0:39:1:0:1:48:2.08%:76:5E-1:40:47:21:26:48 0/0:38:6:0:6:34:17.65%:23:1.2287E-2:40:28:12:16:35 0/0:38:3:0:3:35:8.57%:40:1.1957E-1:42:32:16:16:36 0/0:37:6:0:6:66:9.09%:68:1.3877E-2:38:60:22:38:68 0/0:39:2:0:2:29:6.9%:37:2.4561E-1:42:27:10:17:29 0/0:38:3:0:3:26:11.54%:25:1.1765E-1:40:23:7:16:27 0/0:39:1:0:1:43:2.33%:70:5E-1:39:42:16:26:44 0/0:39:4:0:4:30:13.33%:26:5.62E-2:44:26:11:15:32 0/0:39:1:0:1:17:5.88%:24:5E-1:41:16:8:8:17 0/0:38:2:0:2:21:9.52%:25:2.439E-1:38:19:10:9:21 0/0:37:4:0:4:35:11.43%:35:5.7106E-2:45:31:12:19:35 0/0:32:3:0:3:19:15.79%:17:1.1486E-1:42:16:7:9:20 0/0:36:2:0:2:23:8.7%:28:2.4444E-1:39:21:11:10:23 0/0:38:4:0:4:40:10%:40:5.7784E-2:44:36:17:19:40 0/0:38:3:0:3:34:8.82%:37:1.194E-1:40:31:12:19:34 0/1:38:7:0:7:44:15.91%:22:6.0363E-3:41:37:12:25:44 0/0:35:2:0:2:29:6.9%:37:2.4561E-1:40:27:15:12:29 MTB_anc 2945167 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|PE_PGRS45_Rv2615c-Rv2616_Rv2616|gene2677-gene2678|intergenic_region|gene2677-gene2678|||n.2945167G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:29:14:15:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:20:13:35:94.29%:99:5.9366E-18:38:2:0:2:35 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:36:18:18:37:97.3%:99:2.1762E-20:39:1:0:1:38 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:52:25:27:53:98.11%:99:8.609E-30:37:1:0:1:55 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:14:11:26:96.15%:99:5.4444E-14:39:1:0:1:26 1/1:48:22:8:14:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:54:25:29:55:98.18%:99:5.6837E-31:38:1:0:1:56 1/1:45:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:13:9:4:14:92.86%:64:3.7391E-7:39:1:0:1:14 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:27:13:14:28:96.43%:99:3.7915E-15:39:1:0:1:30 1/1:45:23:8:15:24:95.83%:99:7.7525E-13:39:1:0:1:25 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:14:19:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:46:42:22:20:43:97.67%:99:6.6289E-24:38:1:0:1:43 1/1:48:42:18:24:43:97.67%:99:6.6289E-24:38:1:0:1:43 1/1:46:33:16:17:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:45:36:14:22:37:97.3%:99:2.1762E-20:39:1:0:1:38 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:15:18:34:97.06%:99:1.2301E-18:39:1:0:1:34 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:15:16:33:93.94%:99:8.2416E-17:49:2:1:1:33 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:35:9:26:36:97.22%:99:8.3613E-20:38:1:0:1:36 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:37:20:17:38:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:29:17:12:31:93.55%:99:1.1344E-15:38:2:0:2:31 1/1:42:49:17:32:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:26:13:13:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:46:30:13:17:32:93.75%:99:3.0612E-16:39:2:0:2:32 1/1:48:50:26:24:51:98.04%:99:1.3013E-28:39:1:0:1:52 1/1:48:32:16:16:33:96.97%:99:4.7095E-18:37:1:0:1:33 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:14:8:6:15:93.33%:69:1.0315E-7:39:1:0:1:15 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:32:20:12:33:96.97%:99:4.7095E-18:39:1:0:1:33 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:24:11:13:25:96%:99:2.0568E-13:33:1:0:1:26 1/1:43:23:13:10:24:95.83%:99:7.7525E-13:39:1:0:1:24 1/1:46:39:19:20:40:97.5%:99:3.8137E-22:60:1:0:1:40 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:31:18:13:33:93.94%:99:8.2416E-17:38:2:0:2:34 1/1:42:24:16:8:25:96%:99:2.0568E-13:39:1:0:1:26 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:25:13:12:26:96.15%:99:5.4444E-14:39:1:0:1:26 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:27:13:14:28:96.43%:99:3.7915E-15:39:1:0:1:29 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:42:22:20:43:97.67%:99:6.6289E-24:39:1:0:1:44 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:19:12:7:20:95%:98:1.5234E-10:39:1:0:1:20 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:31:13:18:33:93.94%:99:8.2416E-17:39:2:0:2:33 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:27:15:12:28:96.43%:99:3.7915E-15:38:1:0:1:29 1/1:46:37:19:18:38:97.37%:99:5.6582E-21:37:1:0:1:41 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:23:11:12:24:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:45:35:16:19:36:97.22%:99:8.3613E-20:39:1:0:1:36 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:14:11:27:92.59%:99:2.0853E-13:39:2:0:2:28 1/1:42:26:10:16:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:44:31:14:17:32:96.88%:99:1.8007E-17:32:1:0:1:36 1/1:42:29:10:19:30:96.67%:99:2.6212E-16:39:1:0:1:30 1/1:42:27:17:10:28:96.43%:99:3.7915E-15:38:1:0:1:29 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:32:15:17:33:96.97%:99:4.7095E-18:36:1:0:1:35 1/1:49:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:44:26:18:46:95.65%:99:2.7459E-24:39:2:0:2:46 1/1:45:49:24:25:52:94.23%:99:1.6572E-26:39:3:0:3:54 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:37:15:22:40:92.5%:99:3.0128E-20:38:2:0:2:42 1/1:43:44:19:25:46:95.65%:99:2.7459E-24:37:2:0:2:46 1/1:37:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:45:21:24:48:93.75%:99:3.2362E-24:38:3:0:3:49 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:35:16:19:36:97.22%:99:8.3613E-20:36:1:0:1:37 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:28:12:16:30:93.33%:99:4.194E-15:37:2:0:2:30 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:62:35:27:63:98.41%:99:1.0605E-35:39:1:0:1:64 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:43:18:25:44:97.73%:99:1.7144E-24:37:1:0:1:45 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:23:13:10:25:92%:99:2.7767E-12:36:2:0:2:25 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:20:20:41:97.56%:99:9.8874E-23:39:1:0:1:41 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 2953307 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|hrp1_Rv2626c-Rv2627c_Rv2627c|gene2688-gene2689|intergenic_region|gene2688-gene2689|||n.2953307T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:62 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:42:23:19:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:45:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:27:14:13:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:44:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:11:13:25:96%:99:2.0568E-13:37:1:0:1:25 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:31:14:17:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:40:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 MTB_anc 2953367 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|hrp1_Rv2626c-Rv2627c_Rv2627c|gene2688-gene2689|intergenic_region|gene2688-gene2689|||n.2953367T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:49:21:28:50:98%:99:3.925E-29:0:0:0:0:50 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:16:21:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:46:25:21:47:97.87%:99:2.9526E-26:33:1:1:0:47 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:39:23:16:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:14:17:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:47:40:20:20:41:97.56%:99:9.8874E-23:60:1:0:1:41 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:23:16:7:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:26:13:13:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:41:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:48:31:17:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:20:12:8:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 2955233 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2628_Rv2628|gene2690|transcript|Transcript_gene2690|Coding|1/1|c.176T>C|p.Leu59Ser|176/363|176/363|59/120||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2955233T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2955233T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:51:33:18:52:98.08%:99:3.3479E-29:36:1:0:1:54 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:9:15:25:96%:99:3.101E-14:0:0:0:0:25 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:47:64:28:36:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:50:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:10:16:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:47:20:9:11:21:95.24%:99:4.0873E-11:60:1:1:0:22 1/1:46:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:52:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:64:24:40:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:44:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:61:30:31:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 2958749 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2631_Rv2631|gene2693|transcript|Transcript_gene2693|Coding|1/1|c.1178G>A|p.Gly393Asp|1178/1299|1178/1299|393/432||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2958749G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2958749G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:62:20:42:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:53:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:35:12:23:36:97.22%:99:8.3613E-20:70:1:1:0:37 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:24:13:11:25:96%:99:2.0568E-13:34:1:1:0:27 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:67:33:34:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:72:36:36:72:100%:99:6.7558E-43:0:0:0:0:74 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:45:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:77:38:39:77:100%:99:6.8219E-46:0:0:0:0:77 1/1:43:61:26:35:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:48:15:33:48:100%:99:1.554E-28:0:0:0:0:51 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:61:21:40:61:100%:99:2.609E-36:0:0:0:0:63 1/1:40:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:41:18:23:42:97.62%:99:2.5612E-23:38:1:1:0:43 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 2959324 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv2632c_Rv2632c-Rv2633c_Rv2633c|gene2694-gene2695|intergenic_region|gene2694-gene2695|||n.2959324G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:51:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:53:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:71:29:42:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:47:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:18:20:39:97.44%:99:1.4697E-21:37:1:0:1:39 1/1:52:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:18:13:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:40:9:31:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:35:12:23:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:61:29:32:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 2960249 . C G . PASS AC=285;AF=0.997;AN=286;ANN=G|synonymous_variant|LOW|PE_PGRS46_Rv2634c|gene2696|transcript|Transcript_gene2696|Coding|1/1|c.2193G>C|p.Gly731Gly|2193/2337|2193/2337|731/778||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2960249C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2960249C>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:21:12:9:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:6:5:12:91.67%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:28:16:12:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:23:16:7:24:95.83%:99:7.7525E-13:38:1:0:1:24 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:24:8:16:25:96%:99:3.101E-14:0:0:0:0:26 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:51:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:10:6:4:11:90.91%:52:5.4125E-6:0:0:0:0:11 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:34:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 0/1:48:6:2:4:7:85.71%:29:1.0823E-3:0:0:0:0:7 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 MTB_anc 2960944 . GC GCC,G . PASS AC=67,2;AF=0.239,7.143e-03;AN=280;LOF=(PE_PGRS46_Rv2634c|gene2696|1|1.00);set=variant GT:ABQ:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:29:12:13:25:78.12%:99:8.3928E-12:33:7:4:3:34 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:29:0%:55:1E0:37:29:12:17:40 ./.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:22:0%:40:1E0:36:22:7:15:28 0/0:0:0:0:13:0%:25:1E0:38:13:5:8:21 0/1:28:7:12:16:82.61%:89:1.0931E-9:51:3:2:1:25 0/0:0:0:0:20:0%:36:1E0:35:20:8:12:26 0/1:31:5:6:12:68.75%:44:3.3854E-5:35:5:2:3:17 0/1:36:7:8:15:88.24%:71:7.3277E-8:31:2:2:0:21 0/0:0:0:0:10:0%:17:1E0:37:10:3:7:13 0/1:34:6:15:22:84%:97:1.8789E-10:36:4:2:2:31 0/1:35:4:2:7:75%:24:3.4965E-3:34:2:1:1:8 0/1:30:8:9:14:73.91%:76:2.3502E-8:37:4:3:1:23 2/2:36:10:8:17:90%:87:1.6758E-9:37:2:1:1:23 0/0:0:0:0:10:0%:17:1E0:41:10:3:7:18 1/1:36:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:12:0%:21:1E0:45:12:4:8:16 0/0:0:0:0:11:0%:22:1E0:35:11:5:6:16 0/0:0:0:0:18:0%:32:1E0:39:18:7:11:22 0/1:30:7:6:13:76.47%:55:2.5647E-6:35:4:2:2:21 0/1:36:8:13:25:75%:92:5.6888E-10:35:6:2:4:35 0/1:31:6:8:16:66.67%:56:2.1998E-6:32:7:2:5:26 1/1:28:8:10:14:90%:87:1.6758E-9:48:2:2:0:22 0/0:0:0:0:11:0%:22:1E0:37:11:7:4:19 1/1:34:5:11:15:100%:87:1.6637E-9:0:0:0:0:19 0/0:0:0:0:19:0%:37:1E0:40:19:7:12:24 0/1:40:7:5:12:85.71%:55:2.9913E-6:34:2:2:0:14 0/0:0:0:0:21:0%:40:1E0:42:21:11:10:26 0/1:34:9:8:17:80.95%:76:2.3502E-8:34:4:3:1:24 0/0:0:0:0:13:0%:25:1E0:42:13:5:8:20 0/0:0:0:0:25:0%:48:1E0:36:25:7:18:35 0/1:30:4:8:13:70.59%:49:1.1285E-5:35:5:2:3:19 0/0:0:0:0:22:0%:40:1E0:43:22:11:11:27 0/1:30:17:18:32:79.55%:99:5.1164E-17:37:7:7:0:48 0/1:42:6:13:18:86.36%:93:4.7003E-10:37:2:0:2:24 0/1:31:16:18:30:77.27%:99:1.7333E-16:34:7:5:2:45 0/0:0:0:0:22:0%:40:1E0:38:22:5:17:29 0/1:36:15:15:28:85.71%:99:5.8653E-15:37:5:4:1:38 0/0:0:0:0:18:0%:32:1E0:42:18:10:8:28 0/1:34:8:6:15:82.35%:63:4.8851E-7:34:3:2:1:20 0/1:43:3:3:10:54.55%:22:6.192E-3:33:5:2:3:12 0/1:32:4:13:18:80.95%:76:2.3502E-8:42:4:3:1:27 0/0:0:0:0:28:0%:51:1E0:34:28:13:15:35 0/1:35:8:10:20:81.82%:81:7.1052E-9:34:4:3:1:26 0/0:37:1:0:25:4%:38:5E-1:39:24:7:17:38 0/1:25:3:6:7:69.23%:37:1.6826E-4:36:3:2:1:14 0/1:28:9:8:18:70.83%:70:8.1543E-8:43:7:4:3:25 0/1:29:11:9:23:60.61%:82:5.4216E-9:37:9:6:3:34 1/1:37:5:7:12:92.31%:58:1.3461E-6:37:1:1:0:13 0/0:0:0:0:27:0%:52:1E0:37:27:10:17:41 1/1:36:6:6:11:92.31%:64:3.698E-7:0:0:0:0:13 0/1:29:8:10:16:81.82%:81:7.1052E-9:35:4:2:2:22 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:29:10:13:20:88.46%:99:2.7767E-12:47:2:1:1:28 0/1:27:10:6:11:76.19%:69:1.2221E-7:39:5:4:1:24 0/0:0:0:0:15:0%:29:1E0:37:15:6:9:20 0/1:35:6:3:14:60%:34:3.4983E-4:39:6:2:4:18 0/1:32:11:10:21:80.77%:94:3.4262E-10:32:5:3:2:31 0/0:0:0:0:28:0%:51:1E0:37:28:13:15:40 0/1:31:7:9:14:88.89%:76:2.0936E-8:37:2:1:1:20 0/1:34:6:9:18:71.43%:62:5.4994E-7:35:6:3:3:25 0/0:0:0:0:15:0%:29:1E0:40:15:5:10:24 0/0:0:0:0:13:0%:25:1E0:38:13:3:10:20 0/0:0:0:0:24:0%:44:1E0:39:24:13:11:37 0/0:24:1:0:18:5.56%:24:5E-1:40:17:7:10:21 0/0:0:0:0:32:0%:59:1E0:41:32:18:14:48 0/1:39:3:4:9:77.78%:29:1.1312E-3:48:2:1:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:29:4:15:21:76%:82:5.8245E-9:38:6:3:3:29 0/0:0:0:0:23:0%:44:1E0:41:23:9:14:29 0/1:31:6:7:13:76.47%:55:2.5647E-6:41:4:1:3:19 0/0:0:0:0:17:0%:33:1E0:44:17:10:7:30 0/0:0:0:0:19:0%:37:1E0:37:19:11:8:29 0/1:38:7:11:19:85.71%:84:3.7603E-9:31:3:1:2:24 0/1:38:10:7:19:77.27%:74:3.8368E-8:33:5:3:2:26 0/1:36:6:9:15:83.33%:68:1.4655E-7:36:3:1:2:21 0/0:0:0:0:20:0%:36:1E0:36:20:8:12:25 0/1:32:3:6:11:75%:39:1.1057E-4:33:2:0:2:17 1/1:36:5:7:12:92.31%:58:1.3461E-6:39:1:0:1:14 0/0:0:0:0:19:0%:37:1E0:38:19:5:14:26 1/1:29:11:10:16:91.3%:99:1.0931E-11:37:1:1:0:27 0/0:20:1:0:14:7.14%:17:5E-1:41:13:6:7:20 0/0:0:0:0:17:0%:33:1E0:39:17:7:10:24 0/0:0:0:0:14:0%:25:1E0:38:14:7:7:20 0/0:0:0:0:23:0%:44:1E0:42:23:13:10:28 0/1:34:3:7:11:83.33%:44:3.3652E-5:46:2:2:0:12 0/0:0:0:0:27:0%:52:1E0:39:27:14:13:31 1/1:35:5:5:10:100%:52:5.4125E-6:0:0:0:0:13 0/0:0:0:0:17:0%:33:1E0:35:17:10:7:23 0/1:43:8:12:25:80%:89:1.1273E-9:33:5:3:2:27 1/1:31:6:13:16:90.48%:93:4.7003E-10:35:2:1:1:22 1/1:31:11:6:14:94.44%:86:2.0936E-9:32:1:1:0:18 0/1:35:13:16:33:80.56%:99:7.2821E-14:34:7:5:2:38 0/1:28:8:7:12:83.33%:68:1.4655E-7:32:3:1:2:20 0/0:26:1:0:15:6.67%:21:5E-1:34:14:4:10:28 0/0:0:0:0:25:0%:48:1E0:41:25:14:11:34 0/0:0:0:0:21:0%:40:1E0:37:21:11:10:35 0/0:0:0:0:24:0%:44:1E0:37:24:10:14:31 0/0:0:0:0:15:0%:29:1E0:38:15:5:10:22 0/0:0:0:0:30:0%:55:1E0:40:30:18:12:42 0/0:0:0:0:12:0%:21:1E0:40:12:5:7:19 0/0:0:0:0:12:0%:21:1E0:35:12:3:9:21 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:1:0:19:5.26%:28:5E-1:38:18:5:13:31 0/0:0:0:0:10:0%:17:1E0:37:10:6:4:17 0/0:0:0:0:23:0%:44:1E0:36:23:10:13:33 0/0:0:0:0:18:0%:32:1E0:35:18:7:11:22 0/0:0:0:0:19:0%:37:1E0:40:19:7:12:29 0/0:0:0:0:21:0%:40:1E0:42:21:11:10:26 0/0:0:0:0:12:0%:21:1E0:34:12:8:4:21 0/0:0:0:0:14:0%:25:1E0:36:14:5:9:17 0/0:0:0:0:22:0%:40:1E0:38:22:12:10:28 0/0:26:1:0:17:5.88%:24:5E-1:36:16:4:12:26 0/0:0:0:0:18:0%:32:1E0:35:18:5:13:24 0/0:0:0:0:7:0%:14:1E0:34:7:3:4:13 0/0:26:1:0:17:5.88%:24:5E-1:37:16:6:10:28 0/0:0:0:0:16:0%:29:1E0:38:16:4:12:18 0/0:0:0:0:23:0%:44:1E0:35:23:11:12:25 0/0:0:0:0:17:0%:33:1E0:38:17:8:9:25 0/0:0:0:0:16:0%:29:1E0:42:16:4:12:25 0/0:0:0:0:13:0%:25:1E0:37:13:4:9:14 0/0:0:0:0:10:0%:17:1E0:34:10:5:5:12 0/0:0:0:0:10:0%:17:1E0:35:10:3:7:16 0/0:0:0:0:19:0%:37:1E0:34:19:8:11:24 0/0:0:0:0:7:0%:14:1E0:35:7:1:6:14 0/0:0:0:0:11:0%:22:1E0:35:11:2:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:14:0%:25:1E0:38:14:5:9:18 ./.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:11:0%:22:1E0:39:11:4:7:16 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:7:0%:14:1E0:36:7:4:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:18:0%:32:1E0:36:18:8:10:26 0/1:31:8:10:17:85.71%:84:3.7603E-9:31:3:3:0:21 0/1:28:8:10:15:78.26%:84:3.7603E-9:32:3:3:0:26 0/1:30:15:21:29:83.72%:99:3.2269E-18:34:5:3:2:43 0/0:0:0:0:18:0%:32:1E0:36:18:7:11:28 0/0:0:0:0:19:0%:37:1E0:38:19:9:10:23 0/0:0:0:0:16:0%:29:1E0:40:16:8:8:19 0/0:30:1:0:16:6.25%:21:5E-1:36:15:5:10:21 0/0:0:0:0:26:0%:47:1E0:36:26:16:10:32 0/0:0:0:0:18:0%:32:1E0:34:18:6:12:22 0/0:0:0:0:13:0%:25:1E0:34:13:9:4:15 0/0:0:0:0:20:0%:36:1E0:35:20:8:12:28 0/0:0:0:0:30:0%:55:1E0:37:30:15:15:38 0/1:37:5:9:20:63.64%:55:2.7817E-6:33:8:2:6:26 0/1:30:7:10:16:73.91%:74:3.8368E-8:35:5:4:1:24 MTB_anc 2961605 . G C . PASS AC=253;AF=0.996;AN=254;ANN=C|synonymous_variant|LOW|PE_PGRS46_Rv2634c|gene2696|transcript|Transcript_gene2696|Coding|1/1|c.837C>G|p.Gly279Gly|837/2337|837/2337|279/778||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2961605G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.2961605G>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:17:13:4:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:43:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:9 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:33:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 2970017 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|valU_Rvnt34-Rv2645_Rv2645|gene2710-gene2711|intergenic_region|gene2710-gene2711|||n.2970017C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:52:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:26:12:14:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:34:21:13:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 2970018 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|valU_Rvnt34-Rv2645_Rv2645|gene2710-gene2711|intergenic_region|gene2710-gene2711|||n.2970018G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:16:7:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 MTB_anc 2970019 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|valU_Rvnt34-Rv2645_Rv2645|gene2710-gene2711|intergenic_region|gene2710-gene2711|||n.2970019A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:51:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:22:10:12:23:95.65%:99:4.7526E-13:0:0:0:0:24 1/1:42:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 2971122 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2646_Rv2646|gene2712|transcript|Transcript_gene2712|Coding|1/1|c.572C>T|p.Thr191Ile|572/999|572/999|191/332||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2971122C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2971122C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:51:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 2973658 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|Rv2647_Rv2647-Rv2650c_Rv2650c|gene2713-gene2714|intergenic_region|gene2713-gene2714|||n.2973658T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:28:16:12:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:56:36:20:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:53:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:63:24:39:63:100%:99:1.657E-37:0:0:0:0:64 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 2975227 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2650c_Rv2650c|gene2714|transcript|Transcript_gene2714|Coding|1/1|c.8C>A|p.Thr3Asn|8/1440|8/1440|3/479||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.2975227G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2975227G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:58 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:51:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:30:11:19:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:44:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:49:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:39:19:20:40:97.5%:99:3.8137E-22:37:1:0:1:40 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:39:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 2976575 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|intergenic_region|MODIFIER|Rv2652c_Rv2652c-Rv2653c_Rv2653c|gene2716-gene2717|intergenic_region|gene2716-gene2717|||n.2976575G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:38:36:22:14:38 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:0:0:0:0:42:0%:77:1E0:39:42:24:18:44 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:17 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:21 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:23 0/0:0:0:0:0:39:0%:74:1E0:37:39:25:14:42 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:38:0%:70:1E0:38:38:28:10:38 0/0:0:0:0:0:35:0%:67:1E0:36:35:21:14:35 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:23 0/0:0:0:0:0:21:0%:40:1E0:35:21:17:4:21 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:19 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:18 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:31 0/0:0:0:0:0:37:0%:70:1E0:36:37:16:21:38 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:29:0%:55:1E0:38:29:23:6:29 0/0:0:0:0:0:20:0%:36:1E0:40:20:15:5:20 0/0:0:0:0:0:16:0%:29:1E0:37:16:11:5:18 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:15 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:26 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:26 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:38:28:20:8:29 0/1:38:7:6:1:34:20.59%:22:5.5492E-3:42:27:15:12:36 0/0:0:0:0:0:46:0%:85:1E0:41:46:31:15:46 0/0:0:0:0:0:21:0%:40:1E0:39:21:16:5:21 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:24:0%:44:1E0:35:24:20:4:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:36 0/0:0:0:0:0:46:0%:85:1E0:37:46:25:21:47 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:39 0/0:0:0:0:0:16:0%:29:1E0:44:16:12:4:16 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:20:7:27 0/0:0:0:0:0:36:0%:66:1E0:37:36:19:17:39 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:36 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:38:38:22:16:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:31:0%:59:1E0:37:31:22:9:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:30 0/0:0:0:0:0:20:0%:36:1E0:39:20:14:6:21 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:48:0%:89:1E0:39:48:24:24:48 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:23 0/0:32:1:1:0:43:2.33%:70:5E-1:37:42:26:16:44 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:25 0/0:0:0:0:0:15:0%:29:1E0:38:15:10:5:15 0/0:0:0:0:0:26:0%:47:1E0:37:26:17:9:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:21:0%:40:1E0:38:21:14:7:21 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:44:0%:81:1E0:36:44:29:15:44 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:36:32:24:8:33 0/0:24:1:1:0:29:3.45%:45:5E-1:44:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:33 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:24 0/0:0:0:0:0:45:0%:85:1E0:36:45:28:17:45 0/0:0:0:0:0:26:0%:47:1E0:40:26:18:8:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:31 0/0:0:0:0:0:19:0%:37:1E0:37:19:13:6:19 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:27 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:23 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:23 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:21 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:43 0/0:0:0:0:0:21:0%:40:1E0:38:21:19:2:21 0/0:0:0:0:0:38:0%:70:1E0:37:38:25:13:40 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:19 0/0:0:0:0:0:26:0%:47:1E0:36:26:18:8:27 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:33 0/0:0:0:0:0:42:0%:77:1E0:39:42:24:18:44 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:35 0/0:0:0:0:0:25:0%:48:1E0:38:25:19:6:27 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:19 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:30 0/0:0:0:0:0:25:0%:48:1E0:36:25:18:7:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:29 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:25 0/0:0:0:0:0:34:0%:62:1E0:38:34:22:12:34 0/0:0:0:0:0:21:0%:40:1E0:35:21:16:5:22 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:23 0/0:0:0:0:0:26:0%:47:1E0:37:26:20:6:28 0/0:0:0:0:0:35:0%:67:1E0:36:35:24:11:36 0/0:0:0:0:0:25:0%:48:1E0:38:25:18:7:28 0/0:0:0:0:0:33:0%:63:1E0:37:33:23:10:34 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:20 0/0:0:0:0:0:55:0%:99:1E0:39:55:37:18:55 0/0:0:0:0:0:54:0%:99:1E0:38:54:25:29:55 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:23 0/0:0:0:0:0:25:0%:48:1E0:35:25:14:11:26 0/0:0:0:0:0:36:0%:66:1E0:37:36:20:16:38 0/0:0:0:0:0:32:0%:59:1E0:37:32:21:11:33 0/0:0:0:0:0:36:0%:66:1E0:36:36:19:17:38 0/0:0:0:0:0:30:0%:55:1E0:35:30:23:7:30 0/0:0:0:0:0:33:0%:63:1E0:35:33:25:8:35 0/0:0:0:0:0:24:0%:44:1E0:36:24:14:10:24 0/0:0:0:0:0:29:0%:55:1E0:39:29:22:7:31 0/0:0:0:0:0:28:0%:51:1E0:35:28:19:9:28 0/0:0:0:0:0:44:0%:81:1E0:36:44:36:8:45 0/0:0:0:0:0:36:0%:66:1E0:36:36:19:17:38 0/0:0:0:0:0:32:0%:59:1E0:35:32:18:14:34 0/0:0:0:0:0:29:0%:55:1E0:37:29:20:9:29 0/0:0:0:0:0:24:0%:44:1E0:37:24:17:7:24 0/0:0:0:0:0:49:0%:93:1E0:36:49:28:21:51 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:30 0/0:0:0:0:0:48:0%:89:1E0:38:48:31:17:48 0/0:0:0:0:0:29:0%:55:1E0:36:29:19:10:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:18:8:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:43 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:34 0/0:0:0:0:0:28:0%:51:1E0:37:28:20:8:29 0/0:0:0:0:0:11:0%:22:1E0:43:11:6:5:12 0/0:0:0:0:0:28:0%:51:1E0:38:28:18:10:28 0/0:0:0:0:0:28:0%:51:1E0:36:28:16:12:28 0/0:0:0:0:0:33:0%:63:1E0:38:33:21:12:34 0/0:0:0:0:0:30:0%:55:1E0:36:30:19:11:31 MTB_anc 2976616 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2653c_Rv2653c|gene2717|transcript|Transcript_gene2717|Coding|1/1|c.294G>C|p.Gln98His|294/324|294/324|98/107||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2976616C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2976616C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:39 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:49:30:19:49:100%:99:3.925E-29:0:0:0:0:51 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:34:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:39:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:35:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:35:24:19:5:24:100%:99:3.101E-14:0:0:0:0:28 1/1:35:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:35:39:31:8:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:33:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 MTB_anc 2976814 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|synonymous_variant|LOW|Rv2653c_Rv2653c|gene2717|transcript|Transcript_gene2717|Coding|1/1|c.96C>T|p.Ala32Ala|96/324|96/324|32/107||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2976814G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2976814G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 0/0:0:0:0:0:57:0%:99:1E0:45:57:27:30:57 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:20:0%:36:1E0:47:20:13:7:20 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:25:0%:48:1E0:45:25:18:7:26 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:18 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 1/1:44:28:17:11:29:96.55%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 1/1:40:40:20:20:41:97.56%:99:9.8874E-23:38:1:0:1:41 1/1:40:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 0/0:0:0:0:0:48:0%:89:1E0:50:48:28:20:48 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:51:0%:97:1E0:45:51:24:27:51 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:12:22:35 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:61:29:32:61:100%:99:2.609E-36:0:0:0:0:62 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 0/0:0:0:0:0:43:0%:82:1E0:48:43:25:18:45 1/1:44:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:25:9:35 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:45 0/0:0:0:0:0:36:0%:66:1E0:49:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:52:0%:96:1E0:45:52:22:30:52 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:54:0%:99:1E0:48:54:33:21:54 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:37:0%:70:1E0:50:37:22:15:37 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:41:0%:78:1E0:50:41:21:20:41 0/0:0:0:0:0:65:0%:99:1E0:42:65:32:33:66 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:60:0%:99:1E0:43:60:37:23:60 1/1:46:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:36 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:26:0%:47:1E0:52:26:13:13:26 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:34:0%:62:1E0:50:34:20:14:35 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:46 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:17 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:38:1:1:0:39:2.56%:62:5E-1:45:38:21:17:39 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:36 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:41 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:36 0/0:0:0:0:0:45:0%:85:1E0:46:45:26:19:46 0/0:0:0:0:0:22:0%:40:1E0:40:22:6:16:24 0/0:0:0:0:0:64:0%:99:1E0:41:64:28:36:64 0/0:0:0:0:0:53:0%:99:1E0:44:53:23:30:53 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:40 0/0:0:0:0:0:43:0%:82:1E0:38:43:21:22:45 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:41 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:40:0%:74:1E0:38:40:16:24:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:37 1/1:37:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:36 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:43 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:33 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:16 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 2977169 . G C . PASS AC=292;AF=1.00;AN=292;ANN=C|synonymous_variant|LOW|Rv2654c_Rv2654c|gene2718|transcript|Transcript_gene2718|Coding|1/1|c.66C>G|p.Pro22Pro|66/246|66/246|22/81||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.2977169G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2977169G>C||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:25:7:18:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:43:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:7:12:20:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:46:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:45:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:15:7:8:16:93.75%:81:6.4467E-9:0:0:0:0:17 1/1:38:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:33:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:17:5:12:18:100%:93:4.2852E-10:0:0:0:0:20 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:25:4:21:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 MTB_anc 2977173 . G C . PASS AC=272;AF=1.00;AN=272;ANN=C|missense_variant|MODERATE|Rv2654c_Rv2654c|gene2718|transcript|Transcript_gene2718|Coding|1/1|c.62C>G|p.Ala21Gly|62/246|62/246|21/81||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.2977173G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2977173G>C||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:14:2:12:15:93.33%:69:1.0315E-7:37:1:0:1:15 1/1:34:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:10:1:9:11:90.91%:52:5.4125E-6:0:0:0:0:12 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:24:3:21:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:44:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:38:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:38:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:34:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:14:1:13:15:93.33%:69:1.0315E-7:35:1:0:1:18 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:42:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:23:2:21:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 MTB_anc 2977176 . G C . PASS AC=272;AF=1.00;AN=272;ANN=C|missense_variant|MODERATE|Rv2654c_Rv2654c|gene2718|transcript|Transcript_gene2718|Coding|1/1|c.59C>G|p.Pro20Arg|59/246|59/246|20/81||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.2977176G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2977176G>C||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:13:1:12:14:92.86%:64:3.7391E-7:37:1:0:1:14 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:14:1:13:15:93.33%:69:1.0315E-7:31:1:0:1:15 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:20:0:20:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:23:2:21:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 2977177 . G C . PASS AC=272;AF=1.00;AN=272;ANN=C|missense_variant|MODERATE|Rv2654c_Rv2654c|gene2718|transcript|Transcript_gene2718|Coding|1/1|c.58C>G|p.Pro20Ala|58/246|58/246|20/81||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.2977177G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2977177G>C||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:13:1:12:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:14:1:13:15:93.33%:69:1.0315E-7:24:1:0:1:15 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 2977179 . G A . PASS AC=272;AF=1.00;AN=272;ANN=A|missense_variant|MODERATE|Rv2654c_Rv2654c|gene2718|transcript|Transcript_gene2718|Coding|1/1|c.56C>T|p.Pro19Leu|56/246|56/246|19/81||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.2977179G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2977179G>A||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:13:1:12:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:41:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:0:12:13:92.31%:58:1.3461E-6:37:1:0:1:14 1/1:36:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:20:0:20:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 MTB_anc 2977180 . G C . PASS AC=272;AF=1.00;AN=272;ANN=C|missense_variant|MODERATE|Rv2654c_Rv2654c|gene2718|transcript|Transcript_gene2718|Coding|1/1|c.55C>G|p.Pro19Ala|55/246|55/246|19/81||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.2977180G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2977180G>C||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:38:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:13:1:12:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:1:13:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:23:2:21:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 MTB_anc 2980403 . GC G . PASS AC=300;AF=1.00;AN=300;ANN=G|frameshift_variant|HIGH|Rv2659c_Rv2659c|gene2723|transcript|Transcript_gene2723|Coding|1/1|c.415delG|p.Ala139fs|415/1128|415/1128|139/375||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2980404delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2980404delC||||||;HET=0;HOM=1;LOF=(Rv2659c_Rv2659c|gene2723|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:45:21:24:43:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:29:12:17:30:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:41:51:29:22:52:98.08%:99:3.3479E-29:25:1:1:0:52 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:22:16:6:24:91.67%:99:1.0078E-11:28:2:1:1:24 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:44:15:29:45:95.65%:99:4.4304E-25:37:1:1:0:45 1/1:39:33:14:19:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:35:18:17:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:25:11:14:25:96.15%:99:5.4444E-14:34:1:1:0:26 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:26:13:13:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:41:34:16:18:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:33:12:21:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:39:22:17:39:97.5%:99:3.8137E-22:33:1:0:1:40 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:27:9:18:27:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:31:18:13:32:96.88%:99:1.8007E-17:34:1:1:0:32 1/1:40:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:25:6:19:27:92.59%:99:2.0853E-13:34:2:1:1:27 1/1:41:24:9:15:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:38:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:11:12:24:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:43:35:19:16:36:97.22%:99:8.3613E-20:33:1:1:0:36 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:37:16:21:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:16:14:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:38:19:19:38:97.44%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:16:19:36:97.22%:99:8.3613E-20:34:1:1:0:36 1/1:41:33:20:13:33:97.06%:99:1.2301E-18:32:1:0:1:34 1/1:41:60:32:28:59:98.36%:99:1.6176E-34:33:1:1:0:61 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:39:21:18:40:97.5%:99:3.8137E-22:36:1:0:1:40 1/1:39:38:23:15:37:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:18:15:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:39:16:23:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:20:11:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:18:16:34:97.14%:99:3.2089E-19:30:1:1:0:35 1/1:40:42:18:24:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:46:24:22:45:97.87%:99:2.9526E-26:33:1:0:1:47 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:48:21:27:46:100%:99:1.554E-28:0:0:0:0:48 1/1:46:24:15:9:25:96%:99:2.0568E-13:34:1:1:0:25 1/1:38:37:19:18:38:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:40:22:18:42:95.24%:99:5.6346E-22:29:2:1:1:42 1/1:40:36:19:17:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:16:14:31:96.77%:99:6.8754E-17:35:1:0:1:31 1/1:43:37:18:19:38:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:44:37:18:19:36:97.37%:99:5.6582E-21:32:1:1:0:38 1/1:39:33:8:25:34:97.06%:99:1.2301E-18:33:1:1:0:34 1/1:39:48:22:26:46:100%:99:1.554E-28:0:0:0:0:48 1/1:37:32:15:17:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:20:10:10:20:95.24%:99:4.0873E-11:29:1:0:1:21 1/1:44:41:22:19:42:97.62%:99:2.5612E-23:35:1:0:1:42 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:43:22:21:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:20:9:11:22:90.91%:98:1.3117E-10:47:2:1:1:22 1/1:44:28:16:12:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:35:17:18:35:97.22%:99:8.3613E-20:33:1:0:1:36 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:40:18:22:40:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:38:43:19:24:43:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:44:34:16:18:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:35:19:16:35:97.22%:99:8.3613E-20:35:1:0:1:36 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:34:14:20:35:94.44%:99:1.5887E-18:47:2:1:1:36 1/1:38:28:12:16:28:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:38:37:15:22:37:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:38:19:19:39:95%:99:8.0088E-21:36:2:1:1:40 1/1:41:36:18:18:36:97.3%:99:2.1762E-20:32:1:0:1:37 1/1:42:22:13:9:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:43:19:24:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:28:7:21:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:22:10:12:24:91.67%:99:1.0078E-11:33:2:2:0:24 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:27:14:13:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:37:26:13:13:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:36:26:11:15:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:19:10:9:17:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:13:12:27:92.59%:99:2.0853E-13:33:2:0:2:27 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:7:18:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:41:28:19:9:28:96.55%:99:9.9776E-16:33:1:0:1:29 1/1:37:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:32:14:18:32:96.97%:99:4.7095E-18:35:1:0:1:33 1/1:38:43:22:21:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:16:17:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:35:16:19:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:24:10:14:23:100%:99:3.101E-14:0:0:0:0:24 1/1:39:44:17:27:44:97.78%:99:4.4304E-25:36:1:1:0:45 1/1:38:35:20:15:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:27:11:16:26:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:38:34:18:16:37:91.89%:99:5.6582E-18:31:3:3:0:37 1/1:42:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:28:17:11:27:96.55%:99:9.9776E-16:32:1:1:0:29 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:26:16:10:27:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:38:47:18:29:48:97.92%:99:7.6145E-27:39:1:1:0:48 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:34:13:21:35:97.14%:99:3.2089E-19:34:1:1:0:35 1/1:38:43:18:25:44:97.73%:99:1.7144E-24:32:1:0:1:44 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:31:11:20:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:37:21:16:37:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:21:12:9:22:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:40:36:19:17:36:97.3%:99:2.1762E-20:37:1:1:0:37 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:52:26:26:53:96.3%:99:6.1952E-29:35:2:0:2:54 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 2980970 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2660c_Rv2660c|gene2724|transcript|Transcript_gene2724|Coding|1/1|c.221G>T|p.Cys74Phe|221/228|221/228|74/75||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2980970C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2980970C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:30:16:14:31:96.77%:99:6.8754E-17:60:1:1:0:34 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:53:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:33:17:16:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:74:38:36:74:100%:99:4.2804E-44:0:0:0:0:74 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:52 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:61:28:33:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:49:32:17:49:100%:99:3.925E-29:0:0:0:0:53 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 2983613 . G A . PASS AC=210;AF=0.991;AN=212;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2983613G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.2983613G>A||||||,A|intergenic_region|MODIFIER|Rv2665_Rv2665-clpC2_Rv2667|gene2729-gene2730|intergenic_region|gene2729-gene2730|||n.2983613G>A||||||;HET=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:32:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:4:7:12:91.67%:53:4.8074E-6:33:1:1:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:11:6:5:12:91.67%:53:4.8074E-6:38:1:1:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:8:0%:14:1E0:35:8:7:1:9 1/1:35:28:24:4:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:35:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 MTB_anc 2985216 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2668_Rv2668|gene2731|transcript|Transcript_gene2731|Coding|1/1|c.484A>G|p.Lys162Glu|484/522|484/522|162/173||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2985216A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2985216A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:61:29:32:61:100%:99:2.609E-36:0:0:0:0:62 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:11:4:7:12:91.67%:58:1.4176E-6:0:0:0:0:12 1/1:42:32:16:16:33:96.97%:99:5.4567E-19:0:0:0:0:35 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:30:19:11:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 2988630 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2672_Rv2672|gene2735|transcript|Transcript_gene2735|Coding|1/1|c.949G>C|p.Asp317His|949/1587|949/1587|317/528||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2988630G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2988630G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:46:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:18:12:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:42:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:28:17:11:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:66:37:29:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:37:21:16:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:48:14:9:5:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:41:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:40:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:19:10:9:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:51:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:40:51:36:15:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 MTB_anc 2990584 . C CAGCGGTGATCGCAAGCGCGGCGAGCCGGGCGCAGCGGGTCACCGCCATCGGGACT . PASS AC=4;AF=0.013;AN=300;ANN=CAGCGGTGATCGCAAGCGCGGCGAGCCGGGCGCAGCGGGTCACCGCCATCGGGACT|frameshift_variant&stop_gained|HIGH|aftC_Rv2673|gene2736|transcript|Transcript_gene2736|Coding|1/1|c.1136_1137insTCGCAAGCGCGGCGAGCCGGGCGCAGCGGGTCACCGCCATCGGGACTAGCGGTGA|p.Trp379fs|1137/1302|1137/1302|379/433||INFO_REALIGN_3_PRIME,CAGCGGTGATCGCAAGCGCGGCGAGCCGGGCGCAGCGGGTCACCGCCATCGGGACT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2990584_2990585insAGCGGTGATCGCAAGCGCGGCGAGCCGGGCGCAGCGGGTCACCGCCATCGGGACT||||||,CAGCGGTGATCGCAAGCGCGGCGAGCCGGGCGCAGCGGGTCACCGCCATCGGGACT|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.2990584_2990585insAGCGGTGATCGCAAGCGCGGCGAGCCGGGCGCAGCGGGTCACCGCCATCGGGACT||||||;HOM=0;LOF=(aftC_Rv2673|gene2736|1|1.00);NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:7:3:4:32:21.88%:22:5.4182E-3:47:25:11:14:33 0/0:38:1:1:0:14:7.14%:17:5E-1:47:13:7:6:16 0/0:0:0:0:0:46:0%:85:1E0:46:46:21:25:46 0/0:38:1:0:1:17:5.88%:24:5E-1:38:16:12:4:17 0/0:38:1:0:1:18:5.56%:24:5E-1:41:17:11:6:18 0/0:38:1:0:1:21:4.76%:31:5E-1:45:20:12:8:21 0/0:37:2:1:1:28:7.14%:34:2.4545E-1:48:26:15:11:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:35:3:0:3:24:12.5%:22:1.1702E-1:44:21:17:4:24 0/0:60:2:0:2:28:7.14%:34:2.4545E-1:44:26:15:11:29 0/0:48:2:0:2:25:8%:31:2.449E-1:44:23:12:11:25 0/0:38:1:0:1:28:3.57%:41:5E-1:42:27:20:7:29 0/0:34:1:0:1:15:6.67%:21:5E-1:42:14:11:3:16 0/0:36:4:1:3:36:11.11%:34:5.7257E-2:44:32:17:15:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:38:2:2:0:18:11.11%:18:2.4286E-1:42:16:10:6:18 0/0:35:1:1:0:16:6.25%:21:5E-1:44:15:8:7:16 0/0:34:1:0:1:16:6.25%:21:5E-1:50:15:11:4:16 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:24:8:32 0/0:46:4:1:3:49:8.16%:56:5.8654E-2:42:45:31:14:50 0/0:38:2:2:0:21:9.52%:25:2.439E-1:47:19:10:9:21 0/0:37:3:1:2:29:10.34%:28:1.1818E-1:43:25:12:13:29 0/0:42:4:1:3:24:16.67%:18:5.461E-2:44:20:14:6:26 0/0:37:1:0:1:18:5.56%:24:5E-1:47:17:10:7:19 0/0:37:3:2:1:22:13.64%:19:1.1628E-1:41:19:12:7:22 0/0:0:0:0:0:17:0%:33:1E0:50:17:10:7:18 0/0:38:2:1:1:26:7.69%:30:2.451E-1:43:24:17:7:26 0/0:38:2:1:1:25:8%:27:2.4468E-1:48:22:12:10:25 0/0:49:2:1:1:32:6.25%:40:2.4603E-1:44:30:22:8:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:38:2:2:0:35:5.71%:47:2.4638E-1:41:33:20:13:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:47:6:3:3:37:16.22%:28:1.2549E-2:41:31:16:15:38 0/0:45:3:0:3:28:10.71%:28:1.1818E-1:42:25:10:15:28 0/0:29:1:1:0:48:2.08%:77:5E-1:47:46:26:20:50 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:38:2:1:1:42:4.76%:57:2.4699E-1:42:40:24:16:43 0/0:32:1:0:1:32:3.12%:48:5E-1:46:31:15:16:34 0/0:45:3:1:2:41:7.32%:46:1.2025E-1:43:37:20:17:43 0/0:35:1:0:1:23:4.35%:34:5E-1:39:22:14:8:24 0/0:49:2:1:1:23:8.7%:28:2.4444E-1:43:21:16:5:23 0/0:45:5:2:3:36:13.89%:29:2.6944E-2:44:31:21:10:38 0/0:41:6:4:2:44:13.64%:36:1.3026E-2:42:38:28:10:44 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:36:5:3:2:38:13.16%:32:2.7169E-2:42:33:16:17:38 0/0:49:2:1:1:35:5.71%:47:2.4638E-1:43:33:24:9:35 0/0:60:1:0:1:35:2.86%:55:5E-1:42:34:20:14:35 0/0:37:2:1:1:24:8.33%:27:2.4468E-1:43:22:15:7:25 0/0:37:1:1:0:43:2.33%:66:5E-1:42:40:22:18:43 0/0:47:2:1:1:19:10.53%:21:2.4324E-1:42:17:9:8:19 0/0:38:2:2:0:21:9.52%:25:2.439E-1:39:19:10:9:21 0/0:42:5:4:1:36:13.89%:29:2.6944E-2:42:31:17:14:37 0/0:43:4:3:1:39:10.26%:41:5.7662E-2:41:35:17:18:39 0/0:48:2:0:2:38:5.26%:50:2.4667E-1:39:36:17:19:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:18:10:29 0/0:37:2:2:0:39:5.13%:54:2.4675E-1:42:37:22:15:40 0/0:37:1:0:1:37:2.7%:55:5E-1:44:35:17:18:37 0/0:38:1:1:0:23:4.35%:34:5E-1:42:22:13:9:26 0/0:38:3:2:1:32:9.38%:34:1.1905E-1:44:29:13:16:32 0/0:38:3:1:2:30:10%:31:1.1864E-1:46:27:15:12:30 0/0:38:1:0:1:15:6.67%:21:5E-1:44:14:9:5:15 0/0:35:1:0:1:23:4.35%:31:5E-1:45:21:13:8:24 0/0:38:4:4:0:58:6.9%:68:5.9254E-2:43:54:33:21:60 0/0:37:5:1:4:29:16.67%:21:2.6093E-2:43:25:16:9:31 0/0:37:3:3:0:38:7.89%:43:1.2E-1:42:35:19:16:38 0/0:60:1:0:1:19:5.26%:28:5E-1:46:18:10:8:19 0/0:60:1:0:1:21:4.76%:31:5E-1:42:20:17:3:21 0/0:60:1:0:1:29:3.45%:41:5E-1:46:27:9:18:29 0/0:37:1:0:1:20:5%:27:5E-1:46:19:13:6:20 0/0:0:0:0:0:11:0%:22:1E0:49:11:7:4:14 0/0:48:4:2:2:23:17.39%:18:5.4264E-2:46:19:12:7:23 0/0:49:2:2:0:49:4.08%:71:2.4742E-1:41:47:31:16:51 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:21 0/0:38:1:0:1:30:3.33%:41:5E-1:40:27:17:10:32 0/0:33:1:1:0:22:4.55%:31:5E-1:48:21:10:11:22 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:42:27:19:8:29 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:41:30:14:16:33 0/0:43:4:2:2:34:11.76%:31:5.6946E-2:43:30:20:10:37 0/0:37:4:3:1:28:14.29%:23:5.5746E-2:40:24:19:5:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:37 0/0:49:4:3:1:31:12.9%:29:5.6405E-2:43:27:11:16:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:38:2:0:2:16:12.5%:15:2.4194E-1:48:14:9:5:16 0/0:35:1:1:0:33:3.03%:52:5E-1:44:32:20:12:34 0/0:45:3:1:2:25:12%:25:1.1735E-1:44:22:18:4:25 0/0:49:2:1:1:26:7.69%:30:2.451E-1:44:24:13:11:26 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:16 0/1:40:7:5:2:49:14.29%:22:6.2092E-3:40:42:27:15:50 0/0:37:3:3:0:25:12%:25:1.1735E-1:39:22:11:11:25 0/0:37:4:4:0:46:8.7%:49:5.8402E-2:40:42:23:19:46 0/0:46:5:3:2:22:22.73%:12:2.4248E-2:38:17:11:6:22 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:25 0/0:38:2:2:0:22:9.09%:24:2.4419E-1:40:20:13:7:22 0/0:36:2:2:0:26:7.69%:30:2.451E-1:44:24:12:12:26 0/0:37:1:0:1:34:2.94%:51:5E-1:43:33:18:15:34 0/0:38:2:1:1:26:7.69%:30:2.451E-1:44:24:14:10:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:7:15:22 0/0:38:2:1:1:29:6.9%:34:2.4528E-1:41:25:16:9:30 0/0:35:1:1:0:24:4.17%:34:5E-1:42:23:13:10:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:32 0/0:60:1:0:1:19:5.26%:28:5E-1:44:18:12:6:20 0/0:33:1:0:1:23:4.35%:31:5E-1:42:21:13:8:24 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:44:30:19:11:32 0/0:43:4:2:2:43:9.3%:47:5.8115E-2:42:39:25:14:45 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:44:3:0:3:30:10%:31:1.1864E-1:43:27:16:11:31 0/0:38:4:2:2:23:17.39%:18:5.4264E-2:43:19:12:7:24 0/0:38:1:0:1:32:3.12%:48:5E-1:41:31:18:13:34 0/0:60:1:1:0:29:3.45%:45:5E-1:42:28:20:8:30 0/0:37:2:2:0:24:8.33%:27:2.4468E-1:41:22:13:9:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:39 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:41:5:4:1:29:17.24%:22:2.5917E-2:42:24:16:8:32 0/0:0:0:0:0:13:0%:25:1E0:43:13:9:4:13 0/0:37:6:4:2:37:16.22%:28:1.2549E-2:41:31:20:11:37 0/1:46:10:6:4:38:26.32%:33:4.9525E-4:43:28:16:12:39 0/0:38:2:2:0:25:8%:31:2.449E-1:44:23:16:7:25 0/0:38:1:1:0:18:5.56%:24:5E-1:41:17:8:9:19 0/0:37:4:2:2:36:11.11%:35:5.7106E-2:36:31:18:13:36 0/0:0:0:0:0:30:0%:55:1E0:38:30:23:7:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:43 0/0:0:0:0:0:38:0%:70:1E0:36:38:23:15:40 0/0:0:0:0:0:35:0%:67:1E0:38:35:24:11:36 0/0:37:1:0:1:25:4%:38:5E-1:36:24:16:8:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:37 0/0:38:1:1:0:21:4.76%:31:5E-1:38:20:14:6:21 0/0:35:1:1:0:22:4.55%:31:5E-1:36:20:11:9:22 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:27 0/0:0:0:0:0:33:0%:63:1E0:38:33:20:13:34 0/0:36:3:1:2:22:13.64%:19:1.1628E-1:36:19:10:9:23 0/0:49:4:2:2:20:20%:13:5.3015E-2:38:16:10:6:22 0/0:37:4:4:0:45:8.89%:50:5.8311E-2:37:41:28:13:49 0/0:37:1:1:0:33:3.03%:48:5E-1:43:31:20:11:33 0/0:38:2:2:0:19:10.53%:18:2.4286E-1:37:16:11:5:20 0/0:41:5:3:2:31:16.13%:24:2.6257E-2:38:26:18:8:33 0/0:38:1:1:0:27:3.7%:41:5E-1:42:26:18:8:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:35 0/0:43:4:2:2:26:15.38%:20:5.5222E-2:39:22:15:7:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:37:3:2:1:20:15%:16:1.1538E-1:42:17:10:7:20 0/1:37:7:3:4:50:14%:22:6.2092E-3:38:42:22:20:51 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:33 0/0:38:1:1:0:24:4.17%:34:5E-1:42:22:10:12:24 MTB_anc 2991811 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2675c_Rv2675c|gene2738|transcript|Transcript_gene2738|Coding|1/1|c.126A>C|p.Gln42His|126/753|126/753|42/250||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.2991811T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2991811T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:52:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:13:11:25:96%:99:2.0568E-13:38:1:1:0:25 1/1:47:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:42:18:24:43:97.67%:99:6.6289E-24:39:1:0:1:43 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:29:13:16:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:33:12:21:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:52:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:52:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:49:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:34 MTB_anc 2994187 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|hemE_Rv2678c|gene2741|transcript|Transcript_gene2741|Coding|1/1|c.876G>A|p.Leu292Leu|876/1074|876/1074|292/357||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2994187C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2994187C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:15:13:29:96.55%:99:9.9776E-16:60:1:1:0:31 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:21:12:9:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:49:33:16:49:100%:99:3.925E-29:0:0:0:0:52 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:48:35:13:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 2994258 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|hemE_Rv2678c|gene2741|transcript|Transcript_gene2741|Coding|1/1|c.805G>A|p.Ala269Thr|805/1074|805/1074|269/357||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2994258C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2994258C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:51:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:19:15:35:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:46:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:63 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:24:12:12:25:96%:99:3.101E-14:0:0:0:0:25 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:36:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:37:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:41:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 2994622 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|hemE_Rv2678c|gene2741|transcript|Transcript_gene2741|Coding|1/1|c.441G>A|p.Ala147Ala|441/1074|441/1074|147/357||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.2994622C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.2994622C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:27:14:13:28:96.43%:99:3.7915E-15:36:1:0:1:28 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:51:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:55:18:37:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:44:19:25:45:97.78%:99:4.4304E-25:60:1:0:1:45 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:56:18:38:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:50:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:19:11:8:20:95%:98:1.5234E-10:37:1:0:1:20 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:41:20:21:42:97.62%:99:2.5612E-23:32:1:1:0:43 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:36:8:28:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:42:63:25:38:63:100%:99:1.657E-37:0:0:0:0:66 1/1:39:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:27 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:54 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:42:14:28:43:97.67%:99:6.6289E-24:38:1:0:1:44 1/1:41:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 2996085 . G A . PASS AC=110;AF=0.500;AN=220;ANN=A|intergenic_region|MODIFIER|echA15_Rv2679-Rv2680_Rv2680|gene2742-gene2743|intergenic_region|gene2742-gene2743|||n.2996085G>A||||||;HET=1;HOM=0;NC=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. 0/1:39:25:13:12:56:44.64%:90:9.2302E-10:40:31:20:11:66 0/1:37:9:5:4:22:40.91%:31:7.0165E-4:41:13:7:6:23 0/1:39:13:9:4:24:54.17%:48:1.2938E-5:42:11:6:5:24 0/1:43:10:7:3:26:38.46%:34:3.3576E-4:46:16:9:7:29 ./. 0/1:43:12:5:7:32:37.5%:41:6.8751E-5:38:20:13:7:38 0/1:40:13:7:6:26:50%:47:1.6379E-5:41:13:9:4:31 0/1:44:14:8:6:32:43.75%:50:9.8512E-6:49:18:9:9:33 0/1:42:18:9:9:32:56.25%:68:1.3089E-7:44:14:9:5:35 0/1:37:12:9:3:38:31.58%:40:8.7276E-5:41:26:21:5:44 0/1:45:8:7:1:16:50%:29:1.2236E-3:44:8:4:4:17 ./. 0/1:37:18:7:11:33:54.55%:68:1.5143E-7:37:15:10:5:40 0/1:40:13:9:4:46:28.26%:43:4.5578E-5:40:33:20:13:49 0/1:38:11:4:7:26:42.31%:38:1.2791E-4:45:15:12:3:30 ./. 0/1:42:10:8:2:26:38.46%:34:3.3576E-4:44:16:13:3:31 0/1:41:16:9:7:31:51.61%:59:1.0995E-6:48:15:12:3:34 0/1:40:16:11:5:39:41.03%:56:2.1927E-6:43:23:16:7:50 ./. 0/1:40:13:5:8:36:36.11%:44:3.2589E-5:41:23:17:6:40 0/1:39:18:15:3:36:50%:66:2.1904E-7:41:18:14:4:40 ./. 0/1:39:7:1:6:26:26.92%:23:4.8126E-3:42:18:10:8:30 0/1:45:12:6:6:23:52.17%:44:3.4748E-5:42:11:5:6:26 0/1:47:7:4:3:17:41.18%:24:3.6151E-3:44:10:6:4:18 0/1:40:12:6:6:37:32.43%:40:8.4418E-5:40:25:17:8:42 ./. 0/1:38:20:12:8:41:48.78%:73:4.3347E-8:42:21:13:8:47 0/1:40:21:15:6:49:42.86%:75:3.0726E-8:38:28:17:11:58 0/1:40:20:14:6:43:46.51%:72:5.2508E-8:43:23:10:13:46 ./. 0/1:44:11:8:3:37:29.73%:36:2.0455E-4:45:26:18:8:49 0/1:43:20:11:9:35:57.14%:76:2.0063E-8:46:15:8:7:36 0/1:42:8:8:0:29:27.59%:26:2.2392E-3:41:21:13:8:32 0/1:40:31:18:13:64:48.44%:99:3.6451E-12:42:33:13:20:70 0/1:40:14:7:7:44:31.82%:47:1.7873E-5:46:30:18:12:51 0/1:42:19:13:6:49:38.78%:66:2.1763E-7:42:30:16:14:51 0/1:40:24:10:14:59:40.68%:85:3.1153E-9:42:35:20:15:74 0/1:43:24:17:7:51:47.06%:87:1.6778E-9:39:27:16:11:55 ./. 0/1:42:9:7:2:31:29.03%:30:9.9376E-4:38:22:12:10:34 0/1:36:13:5:8:39:33.33%:44:3.6837E-5:40:26:16:10:42 ./. 0/1:38:29:15:14:52:55.77%:99:7.5157E-12:43:23:8:15:55 0/1:37:26:18:8:58:44.83%:94:3.9115E-10:44:32:17:15:65 0/1:35:16:7:9:41:39.02%:56:2.4696E-6:37:25:13:12:48 0/1:42:14:8:6:39:35.9%:48:1.4735E-5:40:25:13:12:42 0/1:47:14:9:5:22:63.64%:55:2.7817E-6:48:8:5:3:24 0/1:38:22:9:13:46:47.83%:80:8.5409E-9:37:24:12:12:51 ./. 0/1:38:18:12:6:40:45%:64:3.1919E-7:42:22:11:11:41 0/1:36:21:11:10:47:44.68%:76:2.4256E-8:38:25:15:10:51 ./. 0/1:38:14:9:5:34:41.18%:49:1.1295E-5:40:20:12:8:36 0/1:39:15:6:9:43:34.88%:51:6.9561E-6:43:28:13:15:46 ./. 0/1:37:15:10:5:37:40.54%:52:5.1339E-6:41:22:16:6:43 0/1:38:18:10:8:41:43.9%:64:3.1919E-7:43:22:12:10:47 ./. ./. ./. 0/1:42:16:8:8:42:38.1%:55:2.607E-6:41:26:16:10:46 0/1:44:12:7:5:51:23.53%:39:1.1751E-4:44:39:22:17:56 ./. 0/1:43:20:10:10:48:41.67%:71:7.2254E-8:45:27:12:15:50 0/1:44:8:4:4:17:47.06%:28:1.3389E-3:38:9:2:7:18 0/1:42:9:4:5:15:60%:34:3.4983E-4:45:6:3:3:15 0/1:38:14:8:6:32:43.75%:50:9.8512E-6:40:18:8:10:34 ./. 0/1:44:11:7:4:16:68.75%:44:3.3854E-5:46:5:3:2:16 ./. 0/1:35:22:13:9:45:48.89%:81:7.724E-9:42:23:10:13:49 0/1:38:9:7:2:19:47.37%:32:5.667E-4:42:10:8:2:22 0/1:38:17:7:10:37:45.95%:61:6.9312E-7:44:20:8:12:41 ./. 0/1:39:27:12:15:61:44.26%:97:1.7985E-10:45:34:23:11:71 ./. ./. 0/1:37:17:9:8:52:32.69%:57:1.5975E-6:41:35:23:12:57 ./. 0/1:38:12:5:7:31:38.71%:41:6.5329E-5:46:19:10:9:35 ./. 0/1:38:20:12:8:46:43.48%:71:6.7171E-8:45:26:17:9:56 0/1:42:14:8:6:39:35.9%:48:1.4735E-5:38:25:17:8:47 0/1:42:16:6:10:22:72.73%:67:1.7905E-7:52:6:3:3:23 0/1:39:13:8:5:42:30.95%:43:4.0777E-5:47:29:18:11:46 0/1:38:8:2:6:22:36.36%:27:1.8042E-3:43:14:6:8:25 ./. 0/1:39:7:6:1:23:30.43%:23:4.5803E-3:46:16:8:8:25 ./. 0/1:36:11:6:5:28:39.29%:38:1.362E-4:38:16:10:6:33 ./. 0/1:39:9:7:2:21:42.86%:31:6.592E-4:40:12:5:7:24 0/1:36:19:11:8:44:43.18%:68:1.5811E-7:38:25:15:10:50 0/1:39:19:8:11:47:40.43%:67:1.8161E-7:42:27:16:11:52 0/1:37:16:9:7:46:34.78%:55:3.1446E-6:38:30:12:18:48 0/1:42:14:8:6:37:37.84%:48:1.3393E-5:39:23:15:8:41 0/1:42:13:7:6:34:38.24%:45:2.9583E-5:33:21:16:5:43 0/1:40:18:12:6:38:47.37%:65:2.68E-7:40:20:11:9:44 0/1:39:16:11:5:39:41.03%:56:2.1927E-6:40:23:9:14:40 0/1:42:9:7:2:20:45%:32:6.1425E-4:40:11:4:7:25 0/1:36:12:8:4:29:41.38%:42:5.8193E-5:39:17:13:4:33 ./. 0/1:41:9:6:3:26:34.62%:30:8.4928E-4:41:17:10:7:29 0/1:43:21:13:8:43:48.84%:77:1.8298E-8:40:22:13:9:45 0/1:39:18:10:8:40:45%:64:3.1919E-7:40:22:13:9:45 ./. 0/1:39:10:5:5:33:30.3%:33:4.3872E-4:41:23:11:12:34 0/1:40:18:10:8:31:58.06%:69:1.1154E-7:44:13:6:7:34 0/1:35:15:9:6:31:48.39%:54:3.2298E-6:37:16:7:9:36 ./. 0/1:36:19:14:5:39:48.72%:69:1.0268E-7:38:20:5:15:42 0/1:37:29:20:9:63:46.03%:99:2.7231E-11:38:34:20:14:71 0/1:34:17:7:10:44:38.64%:59:1.1194E-6:40:27:11:16:52 0/1:40:20:13:7:35:57.14%:76:2.0063E-8:39:15:7:8:37 ./. 0/1:37:20:13:7:42:47.62%:73:4.7857E-8:38:22:17:5:47 0/1:41:27:17:10:70:38.57%:95:2.751E-10:36:40:27:13:74 ./. 0/1:36:14:9:5:32:43.75%:50:9.1194E-6:38:17:4:13:36 0/1:34:14:8:6:41:34.15%:47:1.6028E-5:37:27:11:16:43 0/1:37:22:16:6:46:47.83%:80:8.5409E-9:42:24:12:12:53 0/1:36:24:11:13:51:47.06%:87:1.6778E-9:41:27:15:12:56 0/1:37:26:19:7:49:53.06%:98:1.5284E-10:39:23:8:15:51 0/1:38:26:18:8:59:44.07%:93:4.2407E-10:40:33:22:11:70 0/1:38:11:7:4:34:32.35%:37:1.8662E-4:38:23:14:9:38 0/1:45:8:7:1:39:20.51%:25:2.624E-3:37:31:14:17:43 0/1:39:11:7:4:30:36.67%:37:1.594E-4:39:19:12:7:36 0/1:35:24:18:6:48:50%:89:1.2355E-9:36:24:18:6:51 0/1:41:10:7:3:42:23.81%:32:5.3293E-4:40:32:17:15:44 ./. 0/1:34:17:10:7:43:39.53%:59:1.0581E-6:38:26:16:10:49 ./. 0/1:37:23:10:13:47:48.94%:84:3.2602E-9:36:24:15:9:52 ./. ./. 0/1:39:21:19:2:53:39.62%:73:3.9927E-8:39:32:22:10:55 0/1:35:19:7:12:49:38.78%:66:2.1763E-7:37:30:17:13:58 0/1:41:10:6:4:38:26.32%:33:4.9525E-4:45:28:17:11:50 ./. 0/1:40:19:9:10:48:39.58%:66:2.0555E-7:43:29:18:11:57 0/1:37:19:12:7:48:39.58%:66:2.0555E-7:38:29:19:10:55 ./. 0/1:38:17:9:8:34:50%:62:5.1914E-7:44:17:11:6:35 0/1:40:12:7:5:38:31.58%:40:8.7276E-5:38:26:14:12:43 0/1:37:23:17:6:55:41.82%:81:6.4034E-9:41:32:20:12:63 ./. MTB_anc 2996085 . G GCGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGCGACGATGCAGAGCGCAA . PASS AC=39;AF=0.488;AN=80;ANN=GCGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGCGACGATGCAGAGCGCAA|intergenic_region|MODIFIER|echA15_Rv2679-Rv2680_Rv2680|gene2742-gene2743|intergenic_region|gene2742-gene2743|||n.2996085_2996086insCGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGCGACGATGCAGAGCGCAA||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:41:38:25:13:47:77.55%:99:8.1086E-18:38:10:5:5:49 0/0:42:4:3:1:14:28.57%:6:4.8889E-2:48:10:4:6:16 ./. ./. ./. ./. 0/1:40:21:8:13:28:67.74%:90:8.7917E-10:47:7:5:2:31 ./. ./. ./. ./. ./. ./. 0/1:39:31:16:15:38:75.61%:99:3.008E-14:43:10:3:7:41 ./. ./. ./. 0/1:42:18:7:11:23:72%:79:1.1937E-8:39:5:2:3:25 ./. ./. ./. 0/1:36:50:28:22:49:89.29%:99:1.5739E-25:47:6:4:2:56 ./. ./. 0/1:39:28:14:14:38:68.29%:99:2.6088E-12:42:13:9:4:41 ./. ./. ./. ./. 0/1:40:26:17:9:33:74.29%:99:4.1482E-12:36:8:5:3:35 ./. ./. ./. 0/1:41:23:14:9:29:74.19%:99:5.3984E-11:45:6:2:4:31 ./. ./. ./. ./. ./. ./. ./. ./. 0/1:39:16:7:9:26:61.54%:62:5.1256E-7:45:10:6:4:26 ./. ./. 0/1:40:32:14:18:40:74.42%:99:1.4421E-14:39:11:6:5:43 ./. ./. ./. ./. ./. ./. 0/1:37:15:5:10:18:71.43%:62:5.4994E-7:50:6:4:2:21 ./. ./. 0/1:39:35:11:24:42:76.09%:99:2.817E-16:42:10:3:7:47 ./. ./. 0/1:38:23:13:10:31:71.88%:99:8.7055E-11:39:7:2:5:32 ./. ./. 0/1:39:33:17:16:42:75%:99:4.5585E-15:42:11:5:6:44 0/1:36:39:15:24:47:70.91%:99:1.0373E-17:43:13:9:4:56 0/1:39:21:9:12:24:70%:97:1.8789E-10:54:4:4:0:29 ./. ./. 0/1:36:19:8:11:23:70.37%:80:8.6144E-9:41:7:4:3:27 ./. ./. ./. ./. 0/1:45:26:13:13:34:70.27%:99:9.2118E-12:48:10:7:3:37 ./. 0/1:45:28:18:10:36:75.68%:99:2.4048E-13:49:7:0:7:37 ./. ./. ./. 0/1:43:25:15:10:33:73.53%:99:8.3928E-12:40:7:3:4:34 ./. 0/1:33:18:10:8:34:48.65%:67:1.9562E-7:42:17:10:7:37 0/1:40:20:7:13:26:71.43%:87:1.8273E-9:47:6:4:2:28 ./. 0/1:41:31:19:12:39:73.81%:99:1.911E-14:37:9:4:5:42 ./. 0/1:39:27:17:10:32:79.41%:99:7.9014E-13:43:7:2:5:34 ./. ./. ./. ./. ./. 0/1:40:23:14:9:31:67.65%:99:8.7055E-11:49:7:6:1:34 ./. 0/1:36:39:23:16:48:75%:99:1.0373E-17:42:13:8:5:52 ./. 0/1:40:34:18:16:43:72.34%:99:1.4341E-15:41:11:4:7:47 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:39:26:13:13:28:86.67%:99:3.9214E-13:56:4:3:1:30 ./. ./. ./. 0/1:34:35:19:16:37:77.78%:99:1.6883E-16:48:9:6:3:45 ./. ./. ./. 0/1:38:34:21:13:38:80.95%:99:3.9902E-17:36:5:2:3:42 ./. ./. ./. ./. 0/1:36:13:9:4:17:65%:55:2.5647E-6:33:4:2:2:20 ./. ./. 0/1:36:18:11:7:24:72%:77:1.8413E-8:38:6:4:2:25 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:36:28:20:8:32:80%:99:1.349E-13:37:6:2:4:35 ./. 0/1:43:33:19:14:41:76.74%:99:2.9926E-16:36:6:3:3:44 ./. 0/1:40:24:10:14:36:64.86%:99:6.1763E-11:36:9:4:5:37 0/1:41:25:14:11:37:64.1%:99:6.9097E-11:43:13:6:7:39 ./. ./. ./. 0/1:37:24:14:10:37:60%:98:1.5744E-10:40:12:7:5:40 ./. ./. 0/1:39:27:10:17:31:72.97%:99:2.0026E-12:44:9:5:4:38 ./. ./. ./. 0/1:37:21:10:11:32:60%:83:3.9837E-9:38:12:7:5:35 MTB_anc 2996119 . C CGACGATGCAGAGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGC . PASS AC=1;AF=3.333e-03;AN=300;ANN=CGACGATGCAGAGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGC|disruptive_inframe_insertion|MODERATE|Rv2680_Rv2680|gene2743|transcript|Transcript_gene2743|Coding|1/1|c.31_32insACGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGCGACGATGCAGAGCGCA|p.Arg10_Ser11insAsnAspGluGluGluArgArgLeuThrSerAlaGlyAspAspAlaGluArg|32/633|32/633|11/210||INFO_REALIGN_3_PRIME,CGACGATGCAGAGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2996119_2996120insGACGATGCAGAGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGC||||||,CGACGATGCAGAGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2996119_2996120insGACGATGCAGAGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGC||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:33 0/0:0:0:0:0:15:0%:29:1E0:42:15:10:5:16 0/0:60:1:0:1:56:1.79%:91:5E-1:44:55:30:25:65 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:24 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:19:7:31 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:28:10:41 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:20 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:41 0/0:0:0:0:0:41:0%:78:1E0:41:41:27:14:45 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:34 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:25 0/0:0:0:0:0:22:0%:40:1E0:50:22:18:4:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:32 0/0:0:0:0:0:43:0%:82:1E0:46:43:30:13:52 0/0:0:0:0:0:44:0%:81:1E0:38:44:24:20:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:29:5:38 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:26 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:23 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:18 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:40 0/0:0:0:0:0:31:0%:59:1E0:38:31:19:12:33 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:49 0/0:0:0:0:0:49:0%:93:1E0:43:49:31:18:56 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:48 0/0:0:0:0:0:26:0%:47:1E0:40:26:18:8:27 0/0:0:0:0:0:36:0%:66:1E0:53:36:27:9:48 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:36 0/0:0:0:0:0:25:0%:48:1E0:41:25:19:6:27 0/0:0:0:0:0:60:0%:99:1E0:45:60:32:28:66 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:50 0/0:0:0:0:0:48:0%:89:1E0:45:48:31:17:50 0/0:0:0:0:0:62:0%:99:1E0:44:62:28:34:71 0/0:0:0:0:0:49:0%:93:1E0:46:49:30:19:53 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:34 0/1:31:7:4:3:40:16.67%:22:5.2713E-3:46:23:12:11:44 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:57:0%:99:1E0:42:57:25:32:60 0/0:0:0:0:0:61:0%:99:1E0:41:61:37:24:65 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:52 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:39 0/0:0:0:0:0:22:0%:40:1E0:49:22:15:7:23 0/0:33:1:1:0:46:2.17%:73:5E-1:43:45:23:22:51 0/0:0:0:0:0:13:0%:25:1E0:39:13:3:10:14 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:48 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:24:16:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:34 0/0:0:0:0:0:44:0%:81:1E0:39:44:26:18:44 0/0:0:0:0:0:38:0%:70:1E0:44:38:27:11:43 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:49 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:46 0/0:38:1:0:1:50:2%:80:5E-1:45:49:27:22:55 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:19 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:52 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:33 0/0:0:0:0:0:30:0%:55:1E0:47:30:20:10:32 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:16 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:48:0%:89:1E0:40:48:22:26:51 0/0:0:0:0:0:22:0%:40:1E0:40:22:16:6:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:42 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:64:0%:99:1E0:45:64:40:24:74 0/0:0:0:0:0:23:0%:44:1E0:46:23:19:4:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:52:0%:96:1E0:43:52:37:15:56 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:29 0/0:0:0:0:0:49:0%:93:1E0:45:49:32:17:57 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:46 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:22 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:43 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:24 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:21:0%:40:1E0:46:21:14:7:23 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:47 0/0:0:0:0:0:46:0%:85:1E0:46:46:24:22:52 0/0:0:0:0:0:41:0%:78:1E0:38:41:18:23:43 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:40 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:41 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:38 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:25 0/0:0:0:0:0:29:0%:55:1E0:41:29:21:8:34 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:26:11:40 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:47 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:40 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:35 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:34:0%:62:1E0:37:34:20:14:38 0/0:0:0:0:0:63:0%:99:1E0:40:63:39:24:72 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:47 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:36 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:16 0/0:0:0:0:0:49:0%:93:1E0:38:49:34:15:51 0/0:0:0:0:0:74:0%:99:1E0:41:74:47:27:78 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:22 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:36 0/0:0:0:0:0:44:0%:81:1E0:37:44:21:23:47 0/0:0:0:0:0:43:0%:82:1E0:41:43:29:14:50 0/0:0:0:0:0:50:0%:92:1E0:38:50:27:23:56 0/0:0:0:0:0:50:0%:92:1E0:36:50:29:21:52 0/0:0:0:0:0:55:0%:99:1E0:42:55:36:19:68 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:45 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:34:9:48 0/0:0:0:0:0:41:0%:78:1E0:39:41:20:21:44 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:31 0/0:0:0:0:0:42:0%:77:1E0:41:42:27:15:49 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:48:0%:89:1E0:37:48:26:22:49 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:48:0%:89:1E0:40:48:37:11:51 0/0:0:0:0:0:47:0%:89:1E0:46:47:23:24:56 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:49 0/0:0:0:0:0:32:0%:59:1E0:37:32:18:14:34 0/0:0:0:0:0:51:0%:97:1E0:45:51:31:20:58 0/0:0:0:0:0:52:0%:96:1E0:40:52:33:19:57 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:28 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:36 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:44 0/0:0:0:0:0:58:0%:99:1E0:42:58:41:17:64 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:22 MTB_anc 2996130 . A AGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG . PASS AC=1;AF=3.333e-03;AN=300;ANN=AGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|frameshift_variant|HIGH|Rv2680_Rv2680|gene2743|transcript|Transcript_gene2743|Coding|1/1|c.31_32insACGATGAGGAGGAGCGGCGCTTGACCTCCGCCGGCGCA|p.Ser11fs|32/633|32/633|11/210||INFO_REALIGN_3_PRIME,AGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2996130_2996131insGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG||||||,AGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2996130_2996131insGCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:25 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:17 0/0:0:0:0:0:58:0%:99:1E0:44:58:30:28:66 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:24 0/0:0:0:0:0:18:0%:32:1E0:42:18:14:4:21 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:38 0/1:44:8:7:1:37:21.05%:26:2.1337E-3:39:19:12:7:41 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:20 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:39 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:26 0/0:0:0:0:0:23:0%:44:1E0:49:23:18:5:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:34 0/0:0:0:0:0:41:0%:78:1E0:47:41:29:12:50 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:44 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:31 0/0:0:0:0:0:32:0%:59:1E0:45:32:28:4:36 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:23 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:19 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:39 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:48 0/0:0:0:0:0:48:0%:89:1E0:43:48:28:20:54 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:44 0/0:0:0:0:0:26:0%:47:1E0:39:26:19:7:27 0/0:0:0:0:0:34:0%:62:1E0:53:34:24:10:45 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:24 0/0:0:0:0:0:58:0%:99:1E0:45:58:32:26:65 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:49 0/0:0:0:0:0:47:0%:89:1E0:43:47:28:19:49 0/0:0:0:0:0:59:0%:99:1E0:45:59:27:32:69 0/0:0:0:0:0:50:0%:92:1E0:45:50:32:18:53 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:32 0/0:0:0:0:0:52:0%:96:1E0:42:52:22:30:58 0/0:0:0:0:0:59:0%:99:1E0:42:59:35:24:63 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:51 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:39 0/0:0:0:0:0:23:0%:44:1E0:47:23:16:7:24 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:48 0/0:0:0:0:0:13:0%:25:1E0:40:13:3:10:13 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:46 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:40 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:32 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:45 0/0:0:0:0:0:35:0%:67:1E0:44:35:24:11:40 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:47 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:33 0/0:0:0:0:0:33:0%:63:1E0:39:33:10:23:33 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:43 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:60 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:18 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:55 0/0:0:0:0:0:15:0%:29:1E0:45:15:6:9:15 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:17:0%:33:1E0:45:17:11:6:18 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:30 0/0:0:0:0:0:44:0%:81:1E0:41:44:18:26:46 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:22 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:41 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:66:0%:99:1E0:45:66:40:26:75 0/0:0:0:0:0:21:0%:40:1E0:43:21:15:6:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:49:0%:93:1E0:41:49:33:16:55 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:28 0/0:0:0:0:0:45:0%:85:1E0:46:45:27:18:55 0/0:0:0:0:0:39:0%:74:1E0:45:39:24:15:44 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:42 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:23 0/0:0:0:0:0:35:0%:67:1E0:36:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:38 0/0:0:0:0:0:21:0%:40:1E0:47:21:15:6:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:43 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:50 0/0:0:0:0:0:40:0%:74:1E0:39:40:17:23:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:40 0/0:0:0:0:0:30:0%:55:1E0:48:30:19:11:39 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:42 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:21:9:33 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:25:12:39 0/0:0:0:0:0:41:0%:78:1E0:45:41:26:15:46 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:27 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:33 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:21 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:41 0/0:0:0:0:0:54:0%:99:1E0:40:54:33:21:63 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:47 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:38 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:15 0/0:0:0:0:0:42:0%:77:1E0:39:42:26:16:44 0/0:0:0:0:0:72:0%:99:1E0:41:72:45:27:79 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:20 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:36 0/0:0:0:0:0:41:0%:78:1E0:38:41:19:22:43 0/0:0:0:0:0:39:0%:74:1E0:40:39:25:14:46 0/0:0:0:0:0:50:0%:92:1E0:40:50:27:23:56 0/0:0:0:0:0:45:0%:85:1E0:37:45:29:16:48 0/0:0:0:0:0:55:0%:99:1E0:42:55:38:17:64 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:36 0/0:33:1:1:0:45:2.22%:73:5E-1:39:44:34:10:50 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:43 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:28 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:44 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:25 0/0:0:0:0:0:45:0%:85:1E0:36:45:24:21:47 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:19 0/0:0:0:0:0:49:0%:93:1E0:39:49:38:11:51 0/0:0:0:0:0:47:0%:89:1E0:45:47:23:24:57 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:46 0/0:0:0:0:0:30:0%:55:1E0:37:30:16:14:31 0/0:0:0:0:0:49:0%:93:1E0:46:49:30:19:57 0/0:0:0:0:0:50:0%:92:1E0:39:50:29:21:55 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:34 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:48 0/0:0:0:0:0:54:0%:99:1E0:43:54:36:18:60 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:21 MTB_anc 2996131 . G GCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG . PASS AC=1;AF=3.333e-03;AN=300;ANN=GCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|frameshift_variant|HIGH|Rv2680_Rv2680|gene2743|transcript|Transcript_gene2743|Coding|1/1|c.31_32insACGATGAGGAGGAGCGGCGCTTGACCTCCGCCGCGCA|p.Ser11fs|32/633|32/633|11/210||INFO_REALIGN_3_PRIME,GCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2996131_2996132insCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG||||||,GCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2996131_2996132insCGCAACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:25 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:17 0/0:0:0:0:0:58:0%:99:1E0:44:58:30:28:66 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:15:6:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:38 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:28 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:20 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:35 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:26 0/0:0:0:0:0:23:0%:44:1E0:50:23:18:5:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:35 0/0:0:0:0:0:41:0%:78:1E0:47:41:29:12:50 0/0:0:0:0:0:43:0%:82:1E0:38:43:23:20:44 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:28:4:36 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:27 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:23 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:48 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:54 0/0:0:0:0:0:40:0%:74:1E0:45:40:25:15:44 0/0:0:0:0:0:25:0%:48:1E0:40:25:18:7:27 0/0:0:0:0:0:33:0%:63:1E0:54:33:24:9:45 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:35 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:24 0/0:0:0:0:0:60:0%:99:1E0:44:60:34:26:65 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:49 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:49 0/0:0:0:0:0:60:0%:99:1E0:45:60:27:33:69 0/0:0:0:0:0:50:0%:92:1E0:45:50:31:19:52 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:32 0/0:0:0:0:0:53:0%:99:1E0:41:53:24:29:58 0/0:0:0:0:0:58:0%:99:1E0:41:58:34:24:61 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:51 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:38 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:24 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:48 0/0:0:0:0:0:13:0%:25:1E0:41:13:3:10:13 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:37 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:46 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:41 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:32 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:45 0/0:0:0:0:0:36:0%:66:1E0:45:36:25:11:40 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:33:0%:63:1E0:39:33:10:23:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:25 0/1:49:10:6:4:40:24.39%:33:4.51E-4:45:24:9:15:44 0/0:0:0:0:0:54:0%:99:1E0:44:54:30:24:60 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:18 0/0:0:0:0:0:51:0%:97:1E0:43:51:26:25:53 0/0:0:0:0:0:14:0%:25:1E0:45:14:5:9:15 0/0:60:1:1:0:18:5.56%:24:5E-1:41:17:5:12:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 0/0:0:0:0:0:17:0%:33:1E0:47:17:11:6:18 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:47 0/0:0:0:0:0:21:0%:40:1E0:41:21:15:6:22 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:41 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:65:0%:99:1E0:44:65:40:25:75 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:23 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:22 0/0:0:0:0:0:51:0%:97:1E0:41:51:34:17:55 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:28 0/0:0:0:0:0:45:0%:85:1E0:46:45:27:18:55 0/0:0:0:0:0:39:0%:74:1E0:45:39:24:15:45 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:24 0/0:33:1:1:0:40:2.5%:62:5E-1:43:39:22:17:42 0/0:60:1:0:1:19:5.26%:28:5E-1:47:18:8:10:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:23 0/0:0:0:0:0:34:0%:62:1E0:36:34:20:14:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:21:0%:40:1E0:47:21:15:6:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:43 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:50 0/0:0:0:0:0:40:0%:74:1E0:38:40:18:22:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:40 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:42 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:33 0/0:60:1:1:0:18:5.56%:24:5E-1:46:17:9:8:18 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:25 0/0:0:0:0:0:37:0%:70:1E0:45:37:25:12:39 0/0:0:0:0:0:40:0%:74:1E0:46:40:26:14:45 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:33 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:21 0/0:0:0:0:0:36:0%:66:1E0:38:36:21:15:41 0/0:0:0:0:0:58:0%:99:1E0:39:58:35:23:63 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:47 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:38 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:15 0/0:0:0:0:0:43:0%:82:1E0:39:43:27:16:44 0/0:0:0:0:0:75:0%:99:1E0:40:75:46:29:79 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:20 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:36 0/0:0:0:0:0:42:0%:77:1E0:39:42:20:22:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:45 0/0:0:0:0:0:49:0%:93:1E0:40:49:26:23:55 0/0:0:0:0:0:47:0%:89:1E0:38:47:29:18:48 0/0:0:0:0:0:54:0%:99:1E0:43:54:37:17:63 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 0/0:0:0:0:0:40:0%:74:1E0:40:40:25:15:43 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:36 0/0:0:0:0:0:45:0%:85:1E0:38:45:34:11:50 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:43 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:44 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:47:0%:89:1E0:37:47:26:21:47 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:19 0/0:0:0:0:0:50:0%:92:1E0:39:50:38:12:51 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:57 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:46 0/0:0:0:0:0:31:0%:59:1E0:37:31:17:14:31 0/0:0:0:0:0:49:0%:93:1E0:46:49:29:20:57 0/0:0:0:0:0:50:0%:92:1E0:39:50:30:20:54 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:35 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:48 0/0:0:0:0:0:55:0%:99:1E0:42:55:37:18:60 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 MTB_anc 2996135 . A AACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG . PASS AC=1;AF=3.333e-03;AN=300;ANN=AACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|disruptive_inframe_insertion|MODERATE|Rv2680_Rv2680|gene2743|transcript|Transcript_gene2743|Coding|1/1|c.31_32insACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|p.Ser11delinsAsnAspGluGluGluArgArgLeuThrSerAlaGly|32/633|32/633|11/210||,AACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2996135_2996136insACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG||||||,AACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2996135_2996136insACGATGAGGAGGAGCGGCGCTTGACCTCCGCCG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:26:0%:47:1E0:35:26:13:13:28 0/0:0:0:0:0:17:0%:33:1E0:43:17:10:7:17 0/0:0:0:0:0:55:0%:99:1E0:45:55:28:27:65 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:24 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:21 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:37 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:27 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:19 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:39 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:43 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:23:0%:44:1E0:48:23:18:5:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:35 0/0:0:0:0:0:41:0%:78:1E0:47:41:30:11:50 0/0:0:0:0:0:44:0%:81:1E0:37:44:21:23:46 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:31 0/0:0:0:0:0:32:0%:59:1E0:45:32:28:4:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:19 0/0:0:0:0:0:19:0%:37:1E0:44:19:7:12:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:39 0/0:0:0:0:0:31:0%:59:1E0:38:31:19:12:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:48 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:53 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:44 0/0:0:0:0:0:25:0%:48:1E0:40:25:18:7:27 0/0:0:0:0:0:35:0%:67:1E0:52:35:24:11:46 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:25 0/0:0:0:0:0:59:0%:99:1E0:44:59:33:26:64 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:49 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:49 0/0:0:0:0:0:59:0%:99:1E0:45:59:27:32:69 0/0:0:0:0:0:50:0%:92:1E0:45:50:31:19:53 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:18 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:54:0%:99:1E0:41:54:25:29:59 0/0:0:0:0:0:58:0%:99:1E0:40:58:35:23:60 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:51 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:17:7:25 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:47 0/0:0:0:0:0:13:0%:25:1E0:41:13:3:10:13 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:46 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:32 0/0:0:0:0:0:44:0%:81:1E0:39:44:24:20:46 0/0:0:0:0:0:34:0%:62:1E0:45:34:23:11:39 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:47 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:10:22:33 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/1:47:11:6:5:52:20.75%:36:2.0455E-4:42:26:11:15:58 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:19 0/0:0:0:0:0:52:0%:96:1E0:43:52:26:26:54 0/0:0:0:0:0:14:0%:25:1E0:44:14:6:8:16 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:17:0%:33:1E0:44:17:11:6:19 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:46:0%:85:1E0:40:46:19:27:48 0/0:0:0:0:0:19:0%:37:1E0:41:19:13:6:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:40 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:27 0/0:0:0:0:0:66:0%:99:1E0:44:66:39:27:75 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:50:0%:92:1E0:41:50:34:16:53 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:20:9:29 0/0:0:0:0:0:46:0%:85:1E0:43:46:29:17:54 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:46 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:42 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:20 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:19:0%:37:1E0:47:19:13:6:21 0/0:0:0:0:0:32:0%:59:1E0:36:32:18:14:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:15:7:24 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:43 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:49 0/0:0:0:0:0:39:0%:74:1E0:39:39:17:22:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:39 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:39 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:43 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:39 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:21:9:32 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:25:11:38 0/0:0:0:0:0:41:0%:78:1E0:45:41:27:14:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:34 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:38:35:21:14:40 0/0:0:0:0:0:54:0%:99:1E0:39:54:33:21:62 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:45 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:40 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:16 0/0:0:0:0:0:42:0%:77:1E0:38:42:26:16:44 0/0:0:0:0:0:73:0%:99:1E0:41:73:44:29:78 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:20 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:34 0/0:0:0:0:0:41:0%:78:1E0:37:41:19:22:43 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:44 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:55 0/0:0:0:0:0:43:0%:82:1E0:37:43:27:16:47 0/0:0:0:0:0:54:0%:99:1E0:41:54:37:17:63 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:36 0/0:0:0:0:0:36:0%:66:1E0:39:36:22:14:41 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:36 0/0:0:0:0:0:45:0%:85:1E0:38:45:34:11:50 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:43 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:44 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:25 0/0:0:0:0:0:44:0%:81:1E0:37:44:24:20:45 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:18 0/0:0:0:0:0:47:0%:89:1E0:38:47:36:11:49 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:56 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:43 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:57 0/0:0:0:0:0:49:0%:93:1E0:39:49:30:19:54 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:28 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:36 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:49 0/0:0:0:0:0:56:0%:99:1E0:42:56:37:19:61 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:22 MTB_anc 2996136 . G A . PASS AC=96;AF=0.320;AN=300;ANN=A|missense_variant|MODERATE|Rv2680_Rv2680|gene2743|transcript|Transcript_gene2743|Coding|1/1|c.32G>A|p.Ser11Asn|32/633|32/633|11/210||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2996136G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2996136G>A||||||;HOM=0;NC=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:28:0%:51:1E0:36:28:14:14:28 0/1:40:6:3:3:16:37.5%:20:8.837E-3:45:10:6:4:16 0/1:39:13:7:6:54:24.07%:42:5.3813E-5:40:41:17:24:65 0/1:39:10:7:3:21:47.62%:36:2.3971E-4:40:11:7:4:24 0/0:47:4:3:1:20:20%:13:5.3015E-2:38:16:11:5:21 0/1:41:11:5:6:26:42.31%:38:1.2791E-4:44:15:10:5:27 0/0:60:1:1:0:28:3.57%:41:5E-1:45:27:9:18:29 0/1:36:13:8:5:35:37.14%:45:3.1103E-5:44:22:8:14:40 0/1:40:7:3:4:25:28%:23:4.8126E-3:38:18:8:10:30 0/1:49:11:5:6:33:33.33%:37:1.8019E-4:43:22:12:10:34 0/1:47:8:4:4:35:22.86%:26:2.4931E-3:43:27:12:15:37 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:27 0/1:45:7:3:4:19:36.84%:23:3.9926E-3:44:12:8:4:19 0/0:38:1:1:0:33:3.03%:52:5E-1:40:32:17:15:34 0/1:38:7:4:3:33:21.21%:22:5.4855E-3:39:26:8:18:39 0/1:37:19:11:8:39:48.72%:69:1.0268E-7:37:20:12:8:43 0/1:40:12:8:4:31:38.71%:41:6.5329E-5:40:19:9:10:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/1:45:10:8:2:23:43.48%:35:2.8066E-4:42:13:8:5:28 0/1:43:8:5:3:32:25%:26:2.3764E-3:41:24:13:11:35 0/1:40:12:8:4:41:29.27%:40:9.5339E-5:39:29:16:13:50 0/0:0:0:0:0:46:0%:85:1E0:38:46:24:22:46 0/1:41:8:6:2:28:28.57%:26:2.188E-3:41:20:7:13:31 0/1:39:9:8:1:32:28.12%:29:1.0185E-3:40:23:17:6:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/1:39:7:3:4:24:29.17%:23:4.7006E-3:38:17:5:12:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:18 0/0:38:3:1:2:21:14.29%:19:1.1585E-1:45:18:7:11:21 0/1:38:15:10:5:36:41.67%:53:4.8188E-6:41:21:9:12:39 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/1:41:14:7:7:43:32.56%:47:1.727E-5:39:29:14:15:48 0/1:38:10:6:4:45:22.22%:32:5.5766E-4:39:35:16:19:52 0/1:45:11:5:6:40:27.5%:36:2.2064E-4:44:29:19:10:43 0/0:37:1:1:0:26:3.85%:38:5E-1:39:25:18:7:27 0/1:45:9:5:4:35:25.71%:29:1.0857E-3:41:26:11:15:46 0/1:45:8:4:4:32:25%:26:2.3764E-3:41:24:15:9:34 0/1:40:8:4:4:24:33.33%:27:1.949E-3:38:16:12:4:25 0/1:45:16:6:10:59:27.12%:53:4.7113E-6:41:43:24:19:64 0/1:41:17:10:7:43:39.53%:59:1.0581E-6:38:26:12:14:49 0/1:42:19:10:9:48:39.58%:66:2.0555E-7:42:29:16:13:49 0/1:42:18:8:10:60:30%:60:8.5119E-7:41:42:14:28:69 0/1:44:13:7:6:50:26%:43:4.9906E-5:44:37:22:15:53 0/0:39:1:0:1:18:5.56%:24:5E-1:38:17:10:7:18 0/1:39:12:8:4:31:38.71%:41:6.5329E-5:39:19:11:8:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:49:2:0:2:29:6.9%:37:2.4561E-1:39:27:14:13:29 0/1:39:20:7:13:57:35.09%:69:1.2588E-7:41:37:18:19:58 0/1:43:20:11:9:58:34.48%:68:1.3135E-7:37:38:21:17:60 0/1:38:14:7:7:42:33.33%:47:1.6656E-5:38:28:9:19:51 0/1:41:10:4:6:35:28.57%:33:4.6276E-4:41:25:16:9:38 0/0:55:4:2:2:24:16.67%:18:5.461E-2:45:20:15:5:25 0/1:41:9:3:6:41:21.95%:29:1.1955E-3:40:32:13:19:46 0/0:0:0:0:0:13:0%:25:1E0:41:13:3:10:13 0/1:40:13:7:6:34:38.24%:45:2.9583E-5:41:21:13:8:36 0/1:40:14:8:6:43:32.56%:47:1.727E-5:41:29:14:15:46 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:39 0/1:38:14:7:7:40:35%:48:1.5388E-5:40:26:15:11:41 0/1:39:11:5:6:27:40.74%:38:1.362E-4:43:16:5:11:32 0/0:0:0:0:0:44:0%:81:1E0:40:44:24:20:46 0/1:42:14:9:5:36:38.89%:48:1.2704E-5:38:22:12:10:40 0/1:45:13:5:8:42:30.95%:43:4.0777E-5:40:29:13:16:47 0/0:37:1:1:0:31:3.23%:48:5E-1:41:30:15:15:31 0/0:38:1:0:1:34:2.94%:51:5E-1:40:33:10:23:34 0/0:33:1:1:0:25:4%:38:5E-1:39:24:10:14:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:39:1:0:1:38:2.63%:58:5E-1:41:37:16:21:39 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:19 0/1:38:17:6:11:52:32.69%:57:1.5975E-6:44:35:19:16:54 0/0:32:5:2:3:16:31.25%:6:2.1691E-2:47:11:5:6:16 0/0:40:6:3:3:21:28.57%:9:1.0344E-2:43:15:5:10:21 0/1:38:9:4:5:29:31.03%:30:9.4048E-4:39:20:12:8:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:33:3:2:1:18:16.67%:14:1.1429E-1:45:15:10:5:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/1:44:13:4:9:46:28.26%:43:4.5578E-5:37:33:14:19:47 0/1:37:7:4:3:20:35%:23:4.158E-3:40:13:9:4:21 0/1:41:18:8:10:38:47.37%:65:2.68E-7:41:20:10:10:40 0/0:39:1:0:1:27:3.7%:41:5E-1:40:26:16:10:27 0/1:43:24:15:9:67:35.82%:83:4.8109E-9:39:43:19:24:75 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/1:38:22:14:8:50:44%:79:1.2104E-8:38:28:17:11:53 0/0:38:1:1:0:30:3.33%:44:5E-1:42:29:16:13:30 0/0:38:6:1:5:29:20.69%:18:1.1736E-2:38:23:10:13:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:20:9:29 0/1:40:13:9:4:47:27.66%:43:4.6702E-5:41:34:17:17:54 0/1:37:12:7:5:40:30%:40:9.2733E-5:39:28:12:16:46 0/0:52:3:2:1:22:13.64%:19:1.1628E-1:46:19:7:12:23 0/1:42:19:11:8:40:47.5%:69:1.1326E-7:42:21:13:8:42 0/0:38:4:1:3:17:23.53%:11:5.132E-2:44:13:4:9:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/1:40:6:3:3:18:33.33%:20:9.5308E-3:45:12:7:5:20 0/0:0:0:0:0:33:0%:63:1E0:37:33:20:13:34 0/1:41:8:4:4:29:27.59%:26:2.2392E-3:37:21:9:12:32 0/0:33:1:0:1:36:2.78%:55:5E-1:43:35:17:18:36 0/1:46:9:4:5:22:40.91%:31:7.0165E-4:39:13:9:4:24 0/1:34:11:6:5:38:28.95%:36:2.1011E-4:38:27:10:17:44 0/1:39:18:10:8:44:40.91%:63:4.2568E-7:42:26:11:15:49 0/1:37:19:5:14:41:46.34%:69:1.2413E-7:38:22:12:10:42 0/1:39:14:7:7:36:38.89%:48:1.2704E-5:37:22:11:11:39 0/1:35:7:6:1:30:23.33%:22:5.2713E-3:38:23:7:16:39 0/1:42:12:8:4:41:29.27%:40:9.5339E-5:41:29:15:14:43 0/1:39:17:6:11:38:44.74%:61:7.5297E-7:40:21:15:6:39 0/1:39:7:3:4:25:28%:23:4.8126E-3:39:18:11:7:28 0/1:40:10:6:4:28:35.71%:34:3.6855E-4:37:18:11:7:32 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/1:47:10:7:3:22:45.45%:35:2.6061E-4:41:12:6:6:25 0/1:40:12:9:3:36:33.33%:40:8.1472E-5:42:24:15:9:38 0/1:38:14:8:6:41:34.15%:47:1.6028E-5:41:27:16:11:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:39 0/1:42:11:4:7:25:44%:39:1.1933E-4:38:14:9:5:27 0/0:47:6:0:6:31:19.35%:20:1.1977E-2:43:25:13:12:35 0/1:41:9:2:7:29:31.03%:30:9.4048E-4:37:20:12:8:34 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:23 0/1:40:11:4:7:38:28.95%:36:2.1011E-4:35:27:17:10:40 0/1:35:17:10:7:58:29.31%:57:1.9326E-6:36:41:22:19:62 0/1:35:9:5:4:39:23.08%:29:1.162E-3:34:30:9:21:45 0/1:38:9:3:6:39:23.08%:29:1.162E-3:37:30:17:13:40 0/0:37:1:1:0:16:6.25%:21:5E-1:37:15:7:8:16 0/1:35:14:9:5:43:32.56%:47:1.727E-5:38:29:17:12:44 0/1:34:27:19:8:72:37.5%:94:3.6614E-10:41:45:23:22:77 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/1:38:10:2:8:31:32.26%:33:4.1251E-4:39:21:12:9:33 0/1:38:19:8:11:42:45.24%:68:1.3525E-7:35:23:11:12:43 0/1:41:12:3:9:38:31.58%:40:8.7276E-5:37:26:18:8:44 0/1:36:14:9:5:46:30.43%:47:1.9039E-5:38:32:12:20:54 0/1:37:7:0:7:43:16.28%:22:5.9972E-3:36:36:26:10:47 0/1:42:20:14:6:55:36.36%:69:1.1494E-7:36:35:22:13:63 0/1:37:13:8:5:32:40.62%:45:2.6443E-5:36:19:10:9:36 0/1:36:20:8:12:35:57.14%:76:2.0063E-8:40:15:13:2:41 0/1:39:10:6:4:32:31.25%:33:4.259E-4:36:22:10:12:36 0/1:34:15:11:4:44:34.09%:51:7.2456E-6:35:29:20:9:50 0/1:35:21:7:14:41:51.22%:78:1.4682E-8:40:20:11:9:43 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/1:37:17:8:9:40:42.5%:60:8.743E-7:34:23:11:12:44 0/0:34:1:0:1:24:4.17%:34:5E-1:40:23:11:12:25 0/1:36:14:10:4:45:31.11%:47:1.8462E-5:37:31:14:17:45 0/0:37:1:1:0:23:4.35%:34:5E-1:40:22:11:11:24 0/0:34:1:1:0:19:5.26%:28:5E-1:37:18:7:11:19 0/1:36:23:16:7:48:47.92%:84:3.6075E-9:40:25:21:4:48 0/1:41:15:8:7:49:30.61%:50:8.6234E-6:37:34:11:23:56 0/1:43:15:8:7:38:39.47%:52:5.4463E-6:41:23:11:12:44 0/0:34:2:2:0:30:6.67%:37:2.4576E-1:38:28:15:13:31 0/1:40:17:9:8:48:35.42%:58:1.3619E-6:42:31:14:17:57 0/1:38:12:6:6:47:25.53%:39:1.0942E-4:37:35:19:16:54 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:28 0/1:43:11:8:3:35:31.43%:37:1.9282E-4:38:24:12:12:36 0/1:39:22:10:12:47:46.81%:80:9.3895E-9:36:25:13:12:50 0/1:42:22:13:9:56:39.29%:77:1.8121E-8:39:34:21:13:61 0/0:39:1:0:1:22:4.55%:31:5E-1:37:21:11:10:22 MTB_anc 2997051 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv2681_Rv2681|gene2744|transcript|Transcript_gene2744|Coding|1/1|c.313C>T|p.Leu105Phe|313/1317|313/1317|105/438||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.2997051C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.2997051C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:49 0/0:0:0:0:0:14:0%:25:1E0:45:14:8:6:14 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:13 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:24 0/0:0:0:0:0:15:0%:29:1E0:45:15:6:9:15 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:8:20:32 0/0:0:0:0:0:13:0%:25:1E0:45:13:5:8:15 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:51 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:20 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:33 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:23 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:38 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:32 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:20 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:38 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:20 0/0:0:0:0:0:18:0%:32:1E0:42:18:5:13:19 0/0:0:0:0:0:13:0%:25:1E0:46:13:7:6:14 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:37 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:21 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:33 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:55:0%:99:1E0:41:55:22:33:56 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:34 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:49 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:10:20:33 0/0:0:0:0:0:22:0%:40:1E0:41:22:6:16:23 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:34:0%:62:1E0:38:34:12:22:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:18:0%:32:1E0:42:18:7:11:18 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:46 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:20 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:41 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:23 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:42 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:33 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:31 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:36 0/0:0:0:0:0:64:0%:99:1E0:41:64:29:35:64 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:19 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:13 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:17:0%:33:1E0:46:17:11:6:17 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:30 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:36 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:22 0/0:0:0:0:0:33:0%:63:1E0:41:33:10:23:34 0/1:39:23:10:13:45:51.11%:85:2.6125E-9:41:22:6:16:49 0/0:0:0:0:0:44:0%:81:1E0:39:44:24:20:46 0/0:39:1:0:1:30:3.33%:44:5E-1:41:29:10:19:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:11:25:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:21 0/0:0:0:0:0:40:0%:74:1E0:37:40:19:21:42 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:44 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:33:0%:63:1E0:36:33:15:18:35 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 0/0:30:1:0:1:15:6.67%:21:5E-1:39:14:6:8:15 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:39 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:30 0/0:0:0:0:0:18:0%:32:1E0:40:18:6:12:18 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:18 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:24 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:28 0/0:0:0:0:0:32:0%:59:1E0:37:32:15:17:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:33 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:33 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:21 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:31 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:25 0/0:0:0:0:0:59:0%:99:1E0:40:59:30:29:60 0/0:0:0:0:0:57:0%:99:1E0:41:57:27:30:59 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:38 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:15 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:26 0/0:0:0:0:0:37:0%:70:1E0:38:37:14:23:39 0/0:0:0:0:0:36:0%:66:1E0:37:36:17:19:39 0/0:0:0:0:0:30:0%:55:1E0:36:30:10:20:33 0/0:0:0:0:0:36:0%:66:1E0:37:36:18:18:38 0/0:0:0:0:0:22:0%:40:1E0:35:22:10:12:25 0/0:0:0:0:0:35:0%:67:1E0:36:35:10:25:36 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:23 0/0:0:0:0:0:29:0%:55:1E0:36:29:11:18:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:33 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:25 0/0:0:0:0:0:34:0%:62:1E0:36:34:15:19:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:35 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:28 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:18 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:32 0/0:0:0:0:0:38:0%:70:1E0:38:38:16:22:38 0/0:0:0:0:0:16:0%:29:1E0:42:16:10:6:17 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:30 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 MTB_anc 3000362 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2683_Rv2683|gene2746|transcript|Transcript_gene2746|Coding|1/1|c.251C>T|p.Ser84Leu|251/498|251/498|84/165||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3000362C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3000362C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:28:19:9:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:60:30:30:60:100%:99:1.035E-35:0:0:0:0:62 1/1:52:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:27:12:15:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:24:14:10:25:96%:99:3.101E-14:0:0:0:0:25 1/1:50:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:48 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 MTB_anc 3002216 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|arsB1_Rv2685|gene2748|transcript|Transcript_gene2748|Coding|1/1|c.234A>C|p.Glu78Asp|234/1287|234/1287|78/428||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3002216A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3002216A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:51 0/0:0:0:0:0:24:0%:44:1E0:49:24:17:7:25 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:41 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:38 0/0:0:0:0:0:32:0%:59:1E0:48:32:13:19:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:35 0/0:0:0:0:0:47:0%:89:1E0:47:47:23:24:47 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:43 0/0:0:0:0:0:25:0%:48:1E0:49:25:17:8:25 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:36 0/0:0:0:0:0:56:0%:99:1E0:43:56:23:33:58 0/0:0:0:0:0:14:0%:25:1E0:48:14:8:6:14 0/0:0:0:0:0:59:0%:99:1E0:44:59:27:32:60 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:27 0/0:0:0:0:0:29:0%:55:1E0:48:29:21:8:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:22:8:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:44 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:37:0%:70:1E0:49:37:17:20:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:53:26:17:9:26 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:19 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:38 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:32 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:42 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:56:0%:99:1E0:49:56:30:26:57 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:39 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:44 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:46:0%:85:1E0:43:46:31:15:47 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:42 0/0:0:0:0:0:47:0%:89:1E0:47:47:21:26:47 0/0:0:0:0:0:24:0%:44:1E0:51:24:13:11:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:48:34:12:22:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:46 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:45 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:45:0%:85:1E0:48:45:27:18:45 0/0:0:0:0:0:37:0%:70:1E0:49:37:21:16:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:40 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:51 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:43 1/1:46:47:28:19:49:95.92%:99:5.0044E-26:55:2:0:2:49 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:49:0%:93:1E0:47:49:25:24:49 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:22 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:47 0/0:0:0:0:0:30:0%:55:1E0:50:30:12:18:30 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:15 0/0:0:0:0:0:45:0%:85:1E0:49:45:15:30:45 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:44 0/0:0:0:0:0:50:0%:92:1E0:46:50:25:25:50 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:33 0/0:0:0:0:0:38:0%:70:1E0:47:38:17:21:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:35 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:28:0%:51:1E0:52:28:13:15:28 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:47 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:21 0/0:0:0:0:0:54:0%:99:1E0:42:54:25:29:55 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:35 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:36 0/0:0:0:0:0:37:0%:70:1E0:49:37:23:14:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:41 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:23:9:33 0/0:0:0:0:0:47:0%:89:1E0:40:47:28:19:50 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:46 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:45 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:58:0%:99:1E0:41:58:36:22:58 0/0:0:0:0:0:61:0%:99:1E0:41:61:29:32:62 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:57 0/0:0:0:0:0:52:0%:96:1E0:41:52:25:27:56 0/0:0:0:0:0:55:0%:99:1E0:43:55:19:36:58 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:47 0/0:0:0:0:0:43:0%:82:1E0:43:43:27:16:46 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:54 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:31 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:38 0/0:0:0:0:0:63:0%:99:1E0:41:63:27:36:64 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:44 0/0:0:0:0:0:46:0%:85:1E0:40:46:28:18:48 0/0:0:0:0:0:39:0%:74:1E0:39:39:22:17:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:29:12:44 0/0:37:1:1:0:59:1.69%:98:5E-1:41:58:29:29:60 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:49 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:46 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:39 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:46 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:46 MTB_anc 3002624 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|arsB1_Rv2685|gene2748|transcript|Transcript_gene2748|Coding|1/1|c.642G>A|p.Glu214Glu|642/1287|642/1287|214/428||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3002624G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3002624G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:51 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:17 0/0:0:0:0:0:48:0%:89:1E0:46:48:28:20:48 0/0:0:0:0:0:41:0%:78:1E0:47:41:13:28:42 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:45:0%:85:1E0:48:45:22:23:45 0/0:0:0:0:0:27:0%:52:1E0:41:27:7:20:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:38 0/0:60:1:1:0:31:3.23%:48:5E-1:48:30:17:13:31 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 1/1:45:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 0/0:0:0:0:0:17:0%:33:1E0:51:17:10:7:17 0/0:0:0:0:0:49:0%:93:1E0:42:49:22:27:49 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:23:0%:44:1E0:51:23:9:14:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:42:0%:77:1E0:48:42:20:22:42 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:9:26:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:31 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:18 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:39:0%:74:1E0:48:39:13:26:39 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:56:0%:99:1E0:47:56:23:33:56 0/0:0:0:0:0:51:0%:97:1E0:48:51:23:28:52 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:37 0/0:0:0:0:0:46:0%:85:1E0:44:46:18:28:46 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:43 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:45 0/0:49:2:0:2:32:6.25%:40:2.4603E-1:47:30:19:11:33 0/0:0:0:0:0:23:0%:44:1E0:48:23:7:16:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:14:29:44 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:37:0%:70:1E0:49:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:31 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:52 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:51 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:22 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:22:0%:40:1E0:53:22:11:11:22 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:35 0/0:0:0:0:0:32:0%:59:1E0:51:32:12:20:32 0/0:0:0:0:0:20:0%:36:1E0:48:20:13:7:20 0/0:0:0:0:0:43:0%:82:1E0:48:43:23:20:44 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:52 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:30 0/0:0:0:0:0:27:0%:52:1E0:51:27:13:14:27 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:60:0%:99:1E0:45:60:31:29:61 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:22:0%:40:1E0:52:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:42:0%:77:1E0:50:42:23:19:42 0/0:39:1:1:0:25:4%:38:5E-1:44:24:14:10:25 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:60:1:0:1:29:3.45%:45:5E-1:50:28:11:17:30 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:48 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:48:0%:89:1E0:44:48:20:28:48 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:36 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:13:24:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:38 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:32 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:19 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:36 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:32 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 0/0:0:0:0:0:51:0%:97:1E0:41:51:23:28:53 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:71:0%:99:1E0:41:71:33:38:72 0/0:0:0:0:0:53:0%:99:1E0:44:53:25:28:54 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:53:0%:99:1E0:40:53:19:34:54 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:44 0/0:0:0:0:0:36:0%:66:1E0:37:36:14:22:40 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:48 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:43 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:34 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:51 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:36 0/0:0:0:0:0:40:0%:74:1E0:40:40:17:23:40 0/0:38:1:1:0:62:1.61%:99:5E-1:39:61:28:33:62 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:52 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:46 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:44 0/0:0:0:0:0:58:0%:99:1E0:42:58:25:33:60 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:37 MTB_anc 3003115 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|arsB1_Rv2685|gene2748|transcript|Transcript_gene2748|Coding|1/1|c.1133G>C|p.Gly378Ala|1133/1287|1133/1287|378/428||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3003115G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3003115G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:53:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:31:9:22:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:52:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:39:16:23:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:48:17:31:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:60:33:27:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:40:11:29:41:97.56%:99:9.8874E-23:30:1:1:0:42 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:51:25:26:52:98.08%:99:2.5024E-30:0:0:0:0:54 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:39:17:22:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:13:17:31:96.77%:99:6.8754E-17:37:1:0:1:31 1/1:48:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:33:17:16:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:18:14:33:96.97%:99:4.7095E-18:35:1:1:0:34 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:47:26:21:48:97.92%:99:6.1512E-28:0:0:0:0:49 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 3005618 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv2688c_Rv2688c|gene2751|transcript|Transcript_gene2751|Coding|1/1|c.33G>A|p.Ala11Ala|33/906|33/906|11/301||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3005618C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3005618C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:53:28:11:17:29:96.55%:99:9.9776E-16:24:1:1:0:29 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:47:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:64:22:42:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:24:13:11:25:96%:99:2.0568E-13:32:1:1:0:26 1/1:44:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:38:10:28:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:60:25:35:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 MTB_anc 3006898 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv2689c_Rv2689c|gene2752|transcript|Transcript_gene2752|Coding|1/1|c.165T>C|p.Tyr55Tyr|165/1218|165/1218|55/405||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3006898A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3006898A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:21:12:9:22:95.45%:99:1.0931E-11:60:1:0:1:23 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:48:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:18:22:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:42:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 3007238 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|stop_gained&splice_region_variant|HIGH|Rv2690c_Rv2690c|gene2753|transcript|Transcript_gene2753|Coding|1/1|c.1972C>T|p.Arg658*|1972/1974|1972/1974|658/657||WARNING_TRANSCRIPT_NO_STOP_CODON,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3007238G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3007238G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:52:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:52:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:49:69:35:34:69:100%:99:4.233E-41:0:0:0:0:70 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:49:17:32:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:59:23:36:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:49:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:39:17:22:40:97.5%:99:3.8137E-22:38:1:0:1:40 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:42:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:49:16:33:49:100%:99:3.925E-29:0:0:0:0:52 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:62 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:52:16:36:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 3008162 . C CCAG . PASS AC=1;AF=3.333e-03;AN=300;ANN=CCAG|inframe_insertion|MODERATE|Rv2690c_Rv2690c|gene2753|transcript|Transcript_gene2753|Coding|1/1|c.1045_1047dupCTG|p.Leu349dup|1047/1974|1047/1974|349/657||WARNING_TRANSCRIPT_NO_STOP_CODON,CCAG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3008162_3008163insCAG||||||,CCAG|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3008162_3008163insCAG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:43:46:17:29:47 0/0:0:0:0:0:15:0%:29:1E0:53:15:8:7:16 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:26 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:23 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:28 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:24 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:40 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:53:0%:99:1E0:44:53:21:32:53 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:26:15:41 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:32 0/0:0:0:0:0:14:0%:25:1E0:46:14:8:6:14 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:49:30:12:18:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:25:14:39 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:36 0/0:0:0:0:0:55:0%:99:1E0:44:55:28:27:56 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:50 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:19 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:36 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:43 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:45 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:13:0%:25:1E0:55:13:5:8:13 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:34 0/0:0:0:0:0:12:0%:21:1E0:47:12:5:7:12 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:41 0/0:0:0:0:0:41:0%:78:1E0:50:41:22:19:43 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:46 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:32 0/0:0:0:0:0:36:0%:66:1E0:49:36:15:21:37 0/0:0:0:0:0:55:0%:99:1E0:47:55:26:29:56 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:37 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:21 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:50:36:21:15:37 0/0:0:0:0:0:16:0%:29:1E0:51:16:8:8:16 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:56:0%:99:1E0:41:56:20:36:57 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 0/1:42:7:3:4:26:26.92%:23:4.9169E-3:42:19:8:11:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:6:18:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:45:0%:85:1E0:45:45:27:18:46 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:19 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:33 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:21 0/0:0:0:0:0:17:0%:33:1E0:51:17:8:9:18 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:50:0%:92:1E0:43:50:21:29:52 0/0:0:0:0:0:42:0%:77:1E0:44:42:14:28:42 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:25:0%:48:1E0:46:25:4:21:25 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:9:20:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:37 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:44 0/0:0:0:0:0:50:0%:92:1E0:42:50:23:27:51 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:46 0/0:0:0:0:0:44:0%:81:1E0:39:44:28:16:46 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:45 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:22:11:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:34 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:38:1:0:1:24:4.17%:34:5E-1:43:23:10:13:24 0/0:0:0:0:0:62:0%:99:1E0:40:62:30:32:62 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:24:12:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:28 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:21 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:38 0/0:0:0:0:0:41:0%:78:1E0:43:41:28:13:41 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 MTB_anc 3008535 . GAACACC G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|disruptive_inframe_deletion|MODERATE|Rv2690c_Rv2690c|gene2753|transcript|Transcript_gene2753|Coding|1/1|c.669_674delGGTGTT|p.Val224_Phe225del|674/1974|669/1974|223/657||WARNING_TRANSCRIPT_NO_STOP_CODON,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3008536_3008541delAACACC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3008536_3008541delAACACC||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:21:0%:40:1E0:51:21:9:12:21 0/0:0:0:0:0:49:0%:93:1E0:44:49:24:25:49 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:31 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:51:32:13:19:32 0/0:0:0:0:0:27:0%:52:1E0:51:27:11:16:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:46 0/0:0:0:0:0:15:0%:29:1E0:53:15:7:8:15 0/0:0:0:0:0:46:0%:85:1E0:39:46:20:26:46 0/0:0:0:0:0:12:0%:21:1E0:44:12:5:7:12 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:22 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:22 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:19:0%:37:1E0:48:19:5:14:19 0/0:0:0:0:0:21:0%:40:1E0:48:21:14:7:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:20:5:25 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:45 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:22 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:32:0%:59:1E0:44:32:22:10:32 0/0:0:0:0:0:16:0%:29:1E0:44:16:6:10:16 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:38 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:30 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:24 0/0:0:0:0:0:40:0%:74:1E0:45:40:26:14:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:34 0/0:0:0:0:0:61:0%:99:1E0:47:61:34:27:61 0/0:0:0:0:0:45:0%:85:1E0:48:45:22:23:45 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:44 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:38 0/0:0:0:0:0:45:0%:85:1E0:46:45:24:21:46 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:22:0%:40:1E0:45:22:7:15:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:48 0/0:0:0:0:0:43:0%:82:1E0:47:43:26:17:43 0/0:0:0:0:0:12:0%:21:1E0:46:12:7:5:12 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:31:0%:59:1E0:51:31:19:12:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:38:1:1:0:42:2.38%:66:5E-1:43:41:24:17:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:13:0%:25:1E0:44:13:8:5:13 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:43:0%:82:1E0:51:43:28:15:44 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:52:0%:96:1E0:48:52:19:33:52 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:33 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:25:0%:48:1E0:48:25:8:17:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:40 0/0:39:1:0:1:32:3.12%:48:5E-1:49:31:18:13:32 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:43:0%:82:1E0:51:43:23:20:43 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:44:0%:81:1E0:49:44:22:22:44 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:34:0%:62:1E0:48:34:11:23:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:21:0%:40:1E0:49:21:8:13:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:22:0%:40:1E0:51:22:10:12:23 0/0:60:1:0:1:31:3.23%:48:5E-1:47:30:20:10:32 0/0:0:0:0:0:28:0%:51:1E0:54:28:14:14:28 0/0:0:0:0:0:53:0%:99:1E0:40:53:28:25:53 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:29 0/0:0:0:0:0:61:0%:99:1E0:46:61:35:26:61 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:37 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:40 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:44:0%:81:1E0:46:44:26:18:44 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:52 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:44:0%:81:1E0:46:44:18:26:45 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:52:0%:96:1E0:46:52:25:27:54 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:57:0%:99:1E0:41:57:21:36:59 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:41 0/0:0:0:0:0:52:0%:96:1E0:42:52:31:21:52 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:52 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:37 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:33 0/0:0:0:0:0:34:0%:62:1E0:37:34:18:16:34 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:45 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:32 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:40 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:65:0%:99:1E0:43:65:40:25:66 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:38 1/1:44:58:28:30:62:93.55%:99:4.7391E-31:33:4:1:3:62 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:51:0%:97:1E0:43:51:31:20:52 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 MTB_anc 3009491 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|ceoB_Rv2691|gene2754|transcript|Transcript_gene2754|Coding|1/1|c.148G>A|p.Gly50Ser|148/684|148/684|50/227||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3009491G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3009491G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3009491G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:45:50:22:28:50 0/0:0:0:0:0:21:0%:40:1E0:51:21:5:16:23 0/0:0:0:0:0:59:0%:99:1E0:47:59:26:33:59 0/0:33:1:0:1:35:2.86%:55:5E-1:49:34:14:20:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:31 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:26 0/0:0:0:0:0:27:0%:52:1E0:49:27:10:17:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:16:0%:29:1E0:46:16:4:12:16 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:46 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:38 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:55 0/0:0:0:0:0:31:0%:59:1E0:51:31:16:15:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:16:0%:29:1E0:48:16:9:7:16 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:36:0%:66:1E0:46:36:23:13:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:31 0/0:39:1:0:1:39:2.56%:62:5E-1:47:38:22:16:39 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:65:0%:99:1E0:44:65:30:35:65 0/0:0:0:0:0:46:0%:85:1E0:48:46:23:23:46 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:53:0%:99:1E0:46:53:27:26:53 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:21 0/0:60:1:1:0:37:2.7%:59:5E-1:44:36:17:19:37 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:49 0/0:0:0:0:0:47:0%:89:1E0:47:47:27:20:47 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:43 0/0:37:1:1:0:24:4.17%:34:5E-1:48:23:10:13:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:33 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:24 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:47 0/0:0:0:0:0:47:0%:89:1E0:44:47:19:28:48 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:48:0%:89:1E0:47:48:25:23:49 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:53:0%:99:1E0:46:53:21:32:54 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:50:0%:92:1E0:45:50:21:29:51 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:35:0%:67:1E0:48:35:15:20:36 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:20 0/0:0:0:0:0:34:0%:62:1E0:49:34:21:13:35 0/0:0:0:0:0:31:0%:59:1E0:52:31:11:20:31 0/0:0:0:0:0:23:0%:44:1E0:51:23:14:9:23 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:44 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:47 0/0:0:0:0:0:34:0%:62:1E0:47:34:22:12:34 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:33 0/0:38:1:1:0:38:2.63%:58:5E-1:44:37:15:22:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:44 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:39 0/0:60:1:1:0:33:3.03%:52:5E-1:48:32:16:16:33 0/0:60:1:1:0:40:2.5%:62:5E-1:45:39:18:21:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:9:19:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:37:0%:70:1E0:52:37:14:23:38 0/1:42:22:9:13:50:44%:79:1.2104E-8:43:28:12:16:51 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:60:0%:99:1E0:45:60:27:33:61 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:25 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:39:1:1:0:34:2.94%:51:5E-1:47:33:15:18:35 0/0:0:0:0:0:23:0%:44:1E0:50:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:38:0%:70:1E0:37:38:19:19:40 0/0:0:0:0:0:62:0%:99:1E0:41:62:26:36:65 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:20 0/0:0:0:0:0:55:0%:99:1E0:42:55:23:32:55 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:48 0/0:0:0:0:0:14:0%:25:1E0:52:14:5:9:14 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:55:0%:99:1E0:43:55:23:32:55 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:47 0/0:0:0:0:0:46:0%:85:1E0:38:46:25:21:46 0/0:0:0:0:0:53:0%:99:1E0:40:53:32:21:53 0/0:0:0:0:0:54:0%:99:1E0:40:54:25:29:55 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:43 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:68:0%:99:1E0:40:68:35:33:69 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:35 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:52:0%:96:1E0:45:52:27:25:52 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:41 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:38 MTB_anc 3010052 . C A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|ceoC_Rv2692|gene2755|transcript|Transcript_gene2755|Coding|1/1|c.29C>A|p.Ala10Glu|29/663|29/663|10/220||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3010052C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3010052C>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:18:0%:32:1E0:49:18:10:8:19 0/0:39:1:1:0:52:1.92%:83:5E-1:45:51:25:26:52 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:26 0/0:0:0:0:0:38:0%:70:1E0:48:38:25:13:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:50:25:17:8:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:36 0/0:0:0:0:0:41:0%:78:1E0:42:41:13:28:41 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:49 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:36:0%:66:1E0:49:36:14:22:37 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:53:0%:99:1E0:45:53:30:23:53 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:22 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:40 0/0:0:0:0:0:53:0%:99:1E0:47:53:33:20:54 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:43 0/0:0:0:0:0:48:0%:89:1E0:43:48:22:26:49 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:38 0/0:0:0:0:0:45:0%:85:1E0:42:45:16:29:45 0/0:60:1:1:0:14:7.14%:17:5E-1:38:13:7:6:15 0/0:0:0:0:0:22:0%:40:1E0:46:22:7:15:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:44 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:40 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:32 0/0:0:0:0:0:22:0%:40:1E0:49:22:9:13:23 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:16:8:24 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:45:0%:81:1E0:42:44:20:24:46 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:37 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:41:0%:78:1E0:49:41:17:24:41 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:44 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:48 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:26 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:47 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:43:0%:82:1E0:49:43:23:20:43 0/0:60:1:1:0:24:4.17%:34:5E-1:47:23:9:14:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:34 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:18 0/0:0:0:0:0:43:0%:82:1E0:49:43:17:26:43 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:43:0%:82:1E0:48:43:21:22:43 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:36 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:46 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:41 0/0:38:1:1:0:34:2.94%:51:5E-1:44:33:16:17:35 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:16 0/0:0:0:0:0:40:0%:74:1E0:49:40:23:17:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:28:0%:51:1E0:54:28:21:7:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/1:47:15:6:9:26:57.69%:57:1.7241E-6:38:11:3:8:27 0/0:0:0:0:0:58:0%:99:1E0:47:58:31:27:59 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:34 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:13:24:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:44 0/0:0:0:0:0:17:0%:29:1E0:44:16:11:5:17 0/0:0:0:0:0:23:0%:44:1E0:43:23:18:5:23 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:54 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:23 0/0:0:0:0:0:59:0%:99:1E0:42:59:30:29:59 0/0:0:0:0:0:66:0%:99:1E0:43:66:34:32:66 0/0:0:0:0:0:31:0%:59:1E0:39:31:10:21:31 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:21 0/0:0:0:0:0:46:0%:85:1E0:40:46:26:20:46 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:42 0/0:0:0:0:0:38:0%:70:1E0:38:38:18:20:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:29:17:46 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:38 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:36 0/0:0:0:0:0:49:0%:93:1E0:39:49:17:32:52 0/0:0:0:0:0:41:0%:78:1E0:38:41:16:25:43 0/0:0:0:0:0:44:0%:81:1E0:38:44:30:14:44 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:34 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:44 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:39 0/0:49:1:0:1:35:2.86%:55:5E-1:48:34:21:13:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:44 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:42 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:48 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 MTB_anc 3010249 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|ceoC_Rv2692|gene2755|transcript|Transcript_gene2755|Coding|1/1|c.226A>C|p.Lys76Gln|226/663|226/663|76/220||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3010249A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3010249A>C||||||;HOM=0;NC=0;set=filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:55 0/0:0:0:0:0:26:0%:47:1E0:54:26:14:12:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:41 0/0:0:0:0:0:24:0%:44:1E0:48:24:6:18:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:46:0%:85:1E0:51:46:26:20:48 0/0:34:1:1:0:35:2.86%:55:5E-1:46:34:14:20:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:33:0%:63:1E0:49:33:10:23:34 0/0:0:0:0:0:48:0%:89:1E0:45:48:25:23:48 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:25 0/0:0:0:0:0:50:0%:92:1E0:44:50:28:22:51 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:27:9:36 0/0:0:0:0:0:35:0%:67:1E0:50:35:18:17:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:26 0/0:0:0:0:0:53:0%:99:1E0:44:53:32:21:53 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:28 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:35 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:42 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:53:0%:99:1E0:47:53:24:29:53 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:39 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:20:0%:36:1E0:50:20:13:7:20 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:42:0%:77:1E0:47:42:22:20:42 0/0:0:0:0:0:54:0%:99:1E0:43:54:25:29:54 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:48 0/0:0:0:0:0:18:0%:32:1E0:50:18:11:7:18 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:50 0/0:0:0:0:0:23:0%:44:1E0:51:23:10:13:23 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:57:0%:99:1E0:43:57:27:30:58 0/0:41:1:0:1:38:2.63%:58:5E-1:44:37:19:18:38 0/0:0:0:0:0:12:0%:21:1E0:43:12:6:6:12 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:39 0/0:0:0:0:0:49:0%:93:1E0:48:49:25:24:49 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:40:0%:74:1E0:47:40:25:15:41 0/0:0:0:0:0:22:0%:40:1E0:51:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:66:0%:99:1E0:48:66:33:33:66 0/0:0:0:0:0:24:0%:44:1E0:50:24:8:16:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:18:0%:32:1E0:51:18:7:11:18 0/0:0:0:0:0:25:0%:48:1E0:49:25:7:18:25 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:39 0/0:0:0:0:0:31:0%:59:1E0:51:31:17:14:31 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:56:0%:99:1E0:41:56:25:31:56 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:43:0%:82:1E0:41:43:29:14:43 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:34 0/0:0:0:0:0:29:0%:55:1E0:49:29:18:11:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:14:27:42 0/0:0:0:0:0:44:0%:81:1E0:41:44:28:16:45 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:31:0%:59:1E0:52:31:18:13:31 0/0:0:0:0:0:63:0%:99:1E0:42:63:25:38:64 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/1:40:7:7:0:53:13.21%:21:6.3251E-3:44:46:20:26:54 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:28 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:17:0%:33:1E0:47:17:7:10:17 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:21:9:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:47 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:43 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:53 0/0:0:0:0:0:65:0%:99:1E0:40:65:31:34:65 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:50:0%:92:1E0:40:50:20:30:51 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:48 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:44 0/0:0:0:0:0:45:0%:85:1E0:37:45:22:23:46 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:44:1:1:0:39:2.56%:62:5E-1:39:38:23:15:41 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:41 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:32 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:43 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:47:0%:89:1E0:39:47:25:22:48 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:41 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:43 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:43 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:49 0/0:0:0:0:0:48:0%:89:1E0:38:48:21:27:48 MTB_anc 3010251 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|ceoC_Rv2692|gene2755|transcript|Transcript_gene2755|Coding|1/1|c.228G>C|p.Lys76Asn|228/663|228/663|76/220||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3010251G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3010251G>C||||||;HOM=0;NC=0;set=filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:43:56:31:25:56 0/0:0:0:0:0:26:0%:47:1E0:53:26:14:12:27 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:42 0/0:0:0:0:0:23:0%:44:1E0:49:23:5:18:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:48:0%:89:1E0:51:48:27:21:48 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:27 0/0:0:0:0:0:33:0%:63:1E0:49:33:10:23:34 0/0:0:0:0:0:47:0%:89:1E0:45:47:24:23:47 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:25 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:50 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:27:9:36 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:36 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:31:18:53 0/0:60:1:1:0:30:3.33%:44:5E-1:46:29:10:19:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:60:1:1:0:15:6.67%:21:5E-1:48:14:6:8:16 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:42 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:44 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:52:0%:96:1E0:46:52:23:29:53 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:20:0%:36:1E0:50:20:13:7:20 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:41:0%:78:1E0:48:41:21:20:42 0/0:0:0:0:0:53:0%:99:1E0:44:53:24:29:53 0/0:39:1:1:0:33:3.03%:52:5E-1:43:32:14:18:33 0/0:0:0:0:0:45:0%:85:1E0:46:45:27:18:47 0/0:0:0:0:0:18:0%:32:1E0:50:18:11:7:18 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:50 0/0:0:0:0:0:23:0%:44:1E0:52:23:10:13:23 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:58:0%:99:1E0:43:58:28:30:58 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:13:0%:25:1E0:44:13:7:6:13 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:40 0/0:0:0:0:0:48:0%:89:1E0:49:48:24:24:48 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:40:0%:74:1E0:47:40:24:16:41 0/0:0:0:0:0:23:0%:44:1E0:52:23:14:9:23 0/0:39:1:1:0:29:3.45%:45:5E-1:48:28:11:17:29 0/0:0:0:0:0:66:0%:99:1E0:48:66:33:33:66 0/0:0:0:0:0:23:0%:44:1E0:50:23:8:15:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:18:0%:32:1E0:51:18:7:11:18 0/0:0:0:0:0:25:0%:48:1E0:49:25:7:18:25 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:31:0%:59:1E0:51:31:17:14:31 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:25 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:57:0%:99:1E0:42:57:24:33:58 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:43:0%:82:1E0:42:43:29:14:43 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:41 0/0:0:0:0:0:46:0%:85:1E0:41:46:28:18:46 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:52:30:18:12:30 0/0:0:0:0:0:62:0%:99:1E0:43:62:24:38:62 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/1:41:7:7:0:54:12.96%:21:6.3515E-3:43:47:21:26:54 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:26:1:1:0:31:3.23%:48:5E-1:43:30:15:15:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:42 0/0:0:0:0:0:39:0%:74:1E0:47:39:16:23:40 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:17 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:22:9:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:43 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:26 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:46 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:44 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:51 0/0:0:0:0:0:65:0%:99:1E0:40:65:31:34:65 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:47:0%:89:1E0:40:47:18:29:51 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:48 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:44 0/0:0:0:0:0:45:0%:85:1E0:38:45:24:21:47 0/0:0:0:0:0:48:0%:89:1E0:43:48:22:26:48 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:41 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:32 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:43 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:48 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:45 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:41:0%:78:1E0:47:41:17:24:41 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:49 0/0:0:0:0:0:50:0%:92:1E0:39:50:21:29:50 MTB_anc 3010420 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|ceoC_Rv2692|gene2755|transcript|Transcript_gene2755|Coding|1/1|c.397G>A|p.Val133Ile|397/663|397/663|133/220||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3010420G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3010420G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:14:16:31:96.77%:99:6.8754E-17:36:1:1:0:33 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:67:33:34:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:44:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:67:28:39:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:25:15:10:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:61:34:27:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:36:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 3022094 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2709_Rv2709|gene2772|transcript|Transcript_gene2772|Coding|1/1|c.256T>C|p.Ser86Pro|256/447|256/447|86/148||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3022094T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3022094T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:52:41:11:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:24:22:2:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:22:21:1:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:36:27:9:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:63:37:26:63:100%:99:1.657E-37:0:0:0:0:64 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:41:24:17:42:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:37:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:32:20:12:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:39:45:33:12:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:40:27:13:41:97.56%:99:9.8874E-23:60:1:1:0:41 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:16:12:30:93.33%:99:1.3074E-16:0:0:0:0:30 1/1:37:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:49:34:15:49:100%:99:3.925E-29:0:0:0:0:49 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:37:43:27:16:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:39:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:51:32:19:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:27:18:9:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:52:37:15:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:56:42:14:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:38:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:36:42:32:10:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:35:28:7:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:32:27:5:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:35:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:35:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:35:28:7:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:51:37:14:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:38:29:19:10:30:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:43:31:12:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:41:32:9:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:35:28:7:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:36:24:12:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:37:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:36:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:34 MTB_anc 3024400 . A G . PASS AC=4;AF=0.013;AN=300;ANN=G|missense_variant|MODERATE|Rv2712c_Rv2712c|gene2775|transcript|Transcript_gene2775|Coding|1/1|c.929T>C|p.Leu310Pro|929/1059|929/1059|310/352||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3024400A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3024400A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:35:0%:67:1E0:39:35:25:10:37 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:16 0/0:0:0:0:0:56:0%:99:1E0:42:56:35:21:56 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:23:9:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:20:0%:36:1E0:40:20:15:5:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:20:0%:36:1E0:42:20:17:3:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:46:0%:85:1E0:38:46:24:22:47 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:17 0/0:0:0:0:0:40:0%:74:1E0:39:40:24:16:40 0/0:0:0:0:0:27:0%:52:1E0:38:27:21:6:27 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:45 0/0:0:0:0:0:32:0%:59:1E0:39:32:22:10:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:24:13:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:27:11:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:32 0/0:0:0:0:0:15:0%:29:1E0:43:15:6:9:15 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:19:7:26 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:27 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:41 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:60:1:1:0:36:2.78%:55:5E-1:44:35:19:16:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:37 0/0:0:0:0:0:34:0%:62:1E0:38:34:25:9:34 0/0:0:0:0:0:56:0%:99:1E0:42:56:32:24:59 0/0:0:0:0:0:38:0%:70:1E0:40:38:28:10:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:43 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:27 0/0:0:0:0:0:30:0%:55:1E0:39:30:21:9:30 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:29 0/0:0:0:0:0:49:0%:93:1E0:40:49:35:14:49 0/0:0:0:0:0:44:0%:81:1E0:39:44:29:15:44 0/0:0:0:0:0:40:0%:74:1E0:43:40:28:12:40 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:45:0%:85:1E0:39:45:30:15:47 0/0:0:0:0:0:20:0%:36:1E0:39:20:15:5:21 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:41 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:44 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:24 0/0:0:0:0:0:43:0%:82:1E0:41:43:26:17:44 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:31:0%:59:1E0:39:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:17:7:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:30 0/0:0:0:0:0:51:0%:97:1E0:41:51:30:21:52 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:50:0%:92:1E0:43:50:33:17:50 0/0:0:0:0:0:19:0%:37:1E0:41:19:13:6:19 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:42:0%:77:1E0:43:42:29:13:43 0/0:0:0:0:0:29:0%:55:1E0:47:29:22:7:29 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:50:0%:92:1E0:38:50:32:18:50 0/0:0:0:0:0:24:0%:44:1E0:43:24:16:8:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:20:9:30 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:22:6:29 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 0/0:0:0:0:0:40:0%:74:1E0:38:40:29:11:40 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:26:12:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:20:7:27 0/0:0:0:0:0:23:0%:44:1E0:47:23:15:8:23 0/0:0:0:0:0:53:0%:99:1E0:39:53:33:20:53 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:30 0/0:0:0:0:0:40:0%:74:1E0:40:40:31:9:40 0/0:0:0:0:0:24:0%:44:1E0:38:24:17:7:24 1/1:40:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:34 0/0:0:0:0:0:41:0%:78:1E0:39:41:26:15:41 0/0:0:0:0:0:22:0%:40:1E0:42:22:16:6:23 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:33 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:21 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:18:0%:32:1E0:40:18:17:1:18 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:18 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:30 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:18 0/0:0:0:0:0:30:0%:55:1E0:40:30:21:9:30 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:30 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:32 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:23 0/0:0:0:0:0:38:0%:70:1E0:38:38:25:13:38 0/0:0:0:0:0:48:0%:89:1E0:41:48:31:17:48 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:39:33:24:9:33 0/0:0:0:0:0:41:0%:78:1E0:38:41:28:13:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:25:10:37 0/0:0:0:0:0:48:0%:89:1E0:39:48:30:18:48 0/0:0:0:0:0:37:0%:70:1E0:37:37:24:13:39 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:22:12:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:33 0/0:0:0:0:0:29:0%:55:1E0:37:29:20:9:29 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:39 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:29 0/0:0:0:0:0:32:0%:59:1E0:38:32:22:10:33 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:63:0%:99:1E0:39:63:45:18:63 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:24:7:31 0/0:0:0:0:0:37:0%:70:1E0:39:37:26:11:37 0/0:0:0:0:0:46:0%:85:1E0:39:46:32:14:46 0/0:0:0:0:0:31:0%:59:1E0:41:31:22:9:31 0/0:0:0:0:0:25:0%:48:1E0:39:25:18:7:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:21:7:28 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:42 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:24 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:46:0%:85:1E0:38:46:27:19:46 0/0:0:0:0:0:46:0%:85:1E0:40:46:29:17:48 0/0:0:0:0:0:29:0%:55:1E0:39:29:21:8:29 MTB_anc 3027606 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2714_Rv2714|gene2777|transcript|Transcript_gene2777|Coding|1/1|c.542G>C|p.Trp181Ser|542/975|542/975|181/324||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3027606G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3027606G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:53:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:23 1/1:41:23:13:10:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:23 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:14:20:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:20:15:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:53:18:35:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:37:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 MTB_anc 3027798 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2714_Rv2714|gene2777|transcript|Transcript_gene2777|Coding|1/1|c.734C>T|p.Ala245Val|734/975|734/975|245/324||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3027798C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3027798C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:54:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:63:28:35:63:100%:99:1.657E-37:0:0:0:0:64 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:35:17:18:36:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:61:37:24:62:98.39%:99:2.609E-36:0:0:0:0:63 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:74:36:38:74:100%:99:4.2804E-44:0:0:0:0:74 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:49:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:51:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:45:23:22:46:97.83%:99:9.6314E-27:0:0:0:0:50 1/1:43:66:24:42:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:71:31:40:71:100%:99:2.6835E-42:0:0:0:0:72 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:48:31:17:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 MTB_anc 3031168 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2719c_Rv2719c|gene2782|transcript|Transcript_gene2782|Coding|1/1|c.370C>T|p.His124Tyr|370/498|370/498|124/165||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3031168G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3031168G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:29:11:18:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:36:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:39:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:20:14:6:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:39:21:14:7:22:95.45%:99:1.0931E-11:37:1:0:1:23 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:38:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:36:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:36:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 3037961 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|hflX_Rv2725c|gene2788|transcript|Transcript_gene2788|Coding|1/1|c.954G>T|p.Arg318Ser|954/1488|954/1488|318/495||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3037961C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3037961C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:16 0/0:0:0:0:0:49:0%:93:1E0:45:49:30:19:49 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:24 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:31:0%:59:1E0:51:31:16:15:31 0/0:0:0:0:0:13:0%:25:1E0:44:13:9:4:13 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:29 0/0:0:0:0:0:39:0%:74:1E0:46:39:26:13:39 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:31 0/0:0:0:0:0:50:0%:92:1E0:46:50:31:19:51 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:49 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:34 0/0:0:0:0:0:13:0%:25:1E0:49:13:5:8:13 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:45:0%:85:1E0:50:45:20:25:48 0/0:0:0:0:0:42:0%:77:1E0:44:42:14:28:43 0/0:0:0:0:0:52:0%:96:1E0:43:52:35:17:53 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:37:1:1:0:40:2.5%:62:5E-1:40:39:15:24:42 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:35 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:15 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:18 0/0:0:0:0:0:46:0%:85:1E0:41:46:17:29:46 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:48 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:45 0/0:0:0:0:0:43:0%:82:1E0:45:43:16:27:44 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:43:0%:82:1E0:49:43:21:22:46 0/0:0:0:0:0:51:0%:97:1E0:43:51:29:22:52 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:41 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:41 0/0:34:1:0:1:23:4.35%:34:5E-1:43:22:15:7:23 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:35 0/0:0:0:0:0:30:0%:55:1E0:51:30:14:16:30 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:50:24:8:16:24 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:18 0/0:0:0:0:0:36:0%:66:1E0:48:36:22:14:36 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:39 0/0:0:0:0:0:20:0%:36:1E0:43:20:5:15:21 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:38 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:54:0%:99:1E0:42:54:28:26:54 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:23:0%:44:1E0:51:23:9:14:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:39 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:33 0/0:0:0:0:0:14:0%:25:1E0:51:14:6:8:14 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:52 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:26 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:12:0%:21:1E0:43:12:6:6:15 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:13:0%:25:1E0:42:13:6:7:13 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:17 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:36 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:44 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:31 0/0:0:0:0:0:61:0%:99:1E0:42:61:26:35:63 0/0:0:0:0:0:45:0%:85:1E0:43:45:28:17:45 0/0:0:0:0:0:16:0%:29:1E0:41:16:12:4:16 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:42 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:48 0/0:0:0:0:0:49:0%:93:1E0:40:49:24:25:53 0/0:0:0:0:0:37:0%:70:1E0:38:37:21:16:39 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:58:0%:99:1E0:40:58:30:28:58 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:27 1/1:42:45:20:25:46:97.83%:99:1.1441E-25:38:1:0:1:47 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:40 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:47:0%:89:1E0:42:47:29:18:47 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:34 MTB_anc 3047998 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv2735c_Rv2735c|gene2798|transcript|Transcript_gene2798|Coding|1/1|c.555C>T|p.Tyr185Tyr|555/993|555/993|185/330||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3047998G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3047998G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:44:56:25:31:56 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:51:0%:97:1E0:50:51:24:27:52 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:38 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:27:0%:52:1E0:48:27:18:9:27 0/0:0:0:0:0:33:0%:63:1E0:49:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:0:0:0:0:55:0%:99:1E0:50:55:23:32:55 0/0:0:0:0:0:38:0%:70:1E0:51:38:17:21:38 0/0:0:0:0:0:42:0%:77:1E0:47:42:18:24:42 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:39:0%:74:1E0:48:39:17:22:41 0/0:0:0:0:0:58:0%:99:1E0:45:58:32:26:58 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:32 0/0:0:0:0:0:15:0%:29:1E0:50:15:6:9:15 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:51:28:16:12:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:19 0/0:0:0:0:0:49:0%:93:1E0:47:49:28:21:49 0/0:0:0:0:0:48:0%:89:1E0:50:48:23:25:48 0/0:0:0:0:0:47:0%:89:1E0:46:47:28:19:48 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:28 0/0:0:0:0:0:25:0%:48:1E0:47:25:17:8:27 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:14:0%:25:1E0:47:14:8:6:14 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:42 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:50:31:14:17:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:30 0/0:0:0:0:0:45:0%:85:1E0:46:45:26:19:45 0/0:0:0:0:0:31:0%:59:1E0:49:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:11:24:36 0/0:0:0:0:0:53:0%:99:1E0:44:53:25:28:53 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:52 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:21:0%:40:1E0:45:21:16:5:21 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:20 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:46:0%:85:1E0:46:46:25:21:46 0/0:0:0:0:0:27:0%:52:1E0:51:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:44:0%:81:1E0:47:44:20:24:44 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:36 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:45:0%:85:1E0:46:45:28:17:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:51:0%:97:1E0:41:51:34:17:51 0/0:0:0:0:0:37:0%:70:1E0:47:37:23:14:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:25 0/0:0:0:0:0:65:0%:99:1E0:45:65:39:26:65 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:31 0/0:0:0:0:0:22:0%:40:1E0:53:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:42:0%:77:1E0:48:42:17:25:42 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 0/0:0:0:0:0:30:0%:55:1E0:49:30:20:10:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:35 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:43 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:50:31:18:13:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:55:0%:99:1E0:43:55:28:27:55 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:42:0%:77:1E0:45:42:19:23:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:37 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:42 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:24:0%:44:1E0:51:24:12:12:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:46 0/0:0:0:0:0:42:0%:77:1E0:44:42:28:14:42 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:48:0%:89:1E0:43:48:28:20:48 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:47 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:46 0/0:0:0:0:0:37:0%:70:1E0:42:37:26:11:38 0/0:0:0:0:0:77:0%:99:1E0:41:77:39:38:77 0/0:0:0:0:0:60:0%:99:1E0:42:60:34:26:61 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:46:0%:85:1E0:43:46:31:15:47 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:56:0%:99:1E0:43:56:32:24:57 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:51 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:60:0%:99:1E0:42:60:29:31:61 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:42 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:54:0%:99:1E0:40:54:29:25:55 0/0:60:1:0:1:50:2%:80:5E-1:44:49:24:25:50 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:36 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:45 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:38:0%:70:1E0:44:38:25:13:39 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:46:0%:85:1E0:45:46:26:20:46 0/0:0:0:0:0:39:0%:74:1E0:44:39:26:13:39 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:47:0%:89:1E0:46:47:25:22:47 0/0:0:0:0:0:57:0%:99:1E0:43:57:33:24:57 0/0:0:0:0:0:56:0%:99:1E0:44:56:35:21:56 0/0:39:1:1:0:38:2.63%:58:5E-1:45:37:17:20:38 MTB_anc 3052791 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|synonymous_variant|LOW|Rv2739c_Rv2739c|gene2802|transcript|Transcript_gene2802|Coding|1/1|c.399A>C|p.Gly133Gly|399/1167|399/1167|133/388||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3052791T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3052791T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:44 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:13 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:38 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:8:20:29 0/0:0:0:0:0:28:0%:51:1E0:51:28:10:18:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:26 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:19:0%:37:1E0:46:19:5:14:20 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:29 0/0:36:1:0:1:28:3.57%:41:5E-1:45:27:9:18:29 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:22 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:16 0/0:0:0:0:0:15:0%:29:1E0:43:15:4:11:15 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:36:0%:66:1E0:37:36:14:22:36 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:43 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:5:14:19 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:9:23:33 0/0:0:0:0:0:46:0%:85:1E0:39:46:16:30:47 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:45 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:43 0/0:0:0:0:0:41:0%:78:1E0:43:41:14:27:43 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:35 0/0:0:0:0:0:46:0%:85:1E0:41:46:18:28:47 0/0:0:0:0:0:42:0%:77:1E0:42:42:14:28:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:47:0%:89:1E0:40:47:22:25:49 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:43 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:16:0%:29:1E0:49:16:6:10:16 0/0:0:0:0:0:51:0%:97:1E0:39:51:23:28:52 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:18 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:27 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:34 0/0:0:0:0:0:39:0%:74:1E0:40:39:15:24:41 0/0:0:0:0:0:44:0%:81:1E0:41:44:17:27:45 0/0:0:0:0:0:18:0%:32:1E0:46:18:4:14:18 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:46 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:58:0%:99:1E0:44:58:24:34:58 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:18 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:23 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:49 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:36 0/0:0:0:0:0:15:0%:29:1E0:41:15:4:11:15 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:34 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:49 0/0:0:0:0:0:34:0%:62:1E0:41:34:11:23:34 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:12:0%:21:1E0:42:12:3:9:12 0/0:0:0:0:0:34:0%:62:1E0:43:34:12:22:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:45 0/0:0:0:0:0:26:0%:47:1E0:52:26:10:16:26 0/0:0:0:0:0:49:0%:93:1E0:40:49:16:33:51 0/0:0:0:0:0:23:0%:44:1E0:43:23:6:17:24 0/0:0:0:0:0:53:0%:99:1E0:43:53:19:34:54 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:39 0/0:0:0:0:0:32:0%:59:1E0:39:32:12:20:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:42 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:28 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:23 0/0:0:0:0:0:41:0%:78:1E0:42:41:12:29:41 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:13:27:40 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:19 0/0:0:0:0:0:27:0%:52:1E0:37:27:9:18:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:38 0/0:0:0:0:0:20:0%:36:1E0:39:20:13:7:24 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:6:17:25 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:31 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:29 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:48 0/0:0:0:0:0:43:0%:82:1E0:41:43:14:29:44 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:31 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:16 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:38:27:8:19:28 0/0:0:0:0:0:36:0%:66:1E0:37:36:17:19:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:41 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:32 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:7:27:34 0/0:0:0:0:0:63:0%:99:1E0:37:63:28:35:64 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:37:0%:70:1E0:40:37:13:24:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:19:0%:37:1E0:40:19:3:16:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:44 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:36 MTB_anc 3053481 . C A . PASS AC=68;AF=0.227;AN=300;ANN=A|missense_variant|MODERATE|ephG_Rv2740|gene2803|transcript|Transcript_gene2803|Coding|1/1|c.249C>A|p.Asp83Glu|249/450|249/450|83/149||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3053481C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3053481C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:45:51:30:21:52 0/0:0:0:0:0:21:0%:40:1E0:51:21:9:12:21 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 0/0:0:0:0:0:23:0%:44:1E0:45:23:16:7:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:18:0%:32:1E0:53:18:7:11:18 0/0:0:0:0:0:20:0%:36:1E0:44:20:6:14:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:43 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:15 0/0:0:0:0:0:53:0%:99:1E0:42:53:23:30:53 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:9:22:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:18:0%:32:1E0:50:18:7:11:20 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:52:0%:96:1E0:43:52:26:26:53 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:41 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:17 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:21 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:49 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:55:0%:99:1E0:46:55:23:32:55 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:34:1:1:0:48:2.08%:76:5E-1:42:47:26:21:50 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:16 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:29 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:43 0/0:60:1:0:1:38:2.63%:58:5E-1:43:37:24:13:38 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:54:0%:99:1E0:44:54:27:27:54 0/0:0:0:0:0:48:0%:89:1E0:44:48:21:27:48 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:47 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:54 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:43 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:41:0%:78:1E0:45:41:25:16:41 0/0:0:0:0:0:40:0%:74:1E0:50:40:16:24:40 0/0:0:0:0:0:36:0%:66:1E0:47:36:12:24:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:47:0%:89:1E0:45:47:23:24:47 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:46:0%:85:1E0:45:46:18:28:46 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:10:22:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:34 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:15:0%:29:1E0:52:15:5:10:15 0/0:0:0:0:0:43:0%:82:1E0:49:43:22:21:43 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:50 0/0:0:0:0:0:28:0%:51:1E0:47:28:6:22:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:38 0/0:0:0:0:0:25:0%:48:1E0:53:25:13:12:25 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:22 0/0:0:0:0:0:52:0%:96:1E0:46:52:26:26:52 0/0:0:0:0:0:48:0%:89:1E0:40:48:16:32:48 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:46 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:43:0%:82:1E0:46:43:25:18:43 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:18 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:24:0%:44:1E0:54:24:10:14:24 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:53:0%:99:1E0:40:53:28:25:53 0/0:38:2:1:1:23:8.7%:28:2.4444E-1:41:21:8:13:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:23:16:39 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 1/1:44:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:22 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:39 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:38:1:0:1:46:2.17%:73:5E-1:47:45:25:20:46 0/0:0:0:0:0:40:0%:74:1E0:45:40:12:28:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:32 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:20 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:43 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 1/1:36:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:14:24:38 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:53 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:47:0%:89:1E0:45:47:29:18:47 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:45 0/0:0:0:0:0:46:0%:85:1E0:39:46:20:26:47 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:47 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:46:26:20:47:97.87%:99:2.9526E-26:38:1:0:1:49 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:56:0%:99:1E0:39:56:32:24:56 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:44 0/0:0:0:0:0:37:0%:70:1E0:38:37:22:15:38 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:34 0/0:0:0:0:0:49:0%:93:1E0:38:49:25:24:49 0/0:0:0:0:0:47:0%:89:1E0:46:47:18:29:47 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:28 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:27 0/0:0:0:0:0:53:0%:99:1E0:43:53:25:28:53 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:42 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 MTB_anc 3054659 . C A . PASS AC=229;AF=0.996;AN=230;ANN=A|missense_variant|MODERATE|PE_PGRS47_Rv2741|gene2804|transcript|Transcript_gene2804|Coding|1/1|c.746C>A|p.Thr249Asn|746/1578|746/1578|249/525||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3054659C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3054659C>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:26:3:23:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:13:4:9:14:92.86%:64:3.7391E-7:37:1:0:1:15 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 0/1:36:7:1:6:8:87.5%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:41:15:6:9:16:93.75%:75:2.8282E-8:38:1:0:1:18 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:32:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:36:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3054663 . G C . PASS AC=232;AF=1.00;AN=232;ANN=C|synonymous_variant|LOW|PE_PGRS47_Rv2741|gene2804|transcript|Transcript_gene2804|Coding|1/1|c.750G>C|p.Gly250Gly|750/1578|750/1578|250/525||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3054663G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3054663G>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:23:3:20:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:33:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:13:4:9:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:35:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:33:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3054694 . C G . PASS AC=197;AF=0.995;AN=198;ANN=G|missense_variant|MODERATE|PE_PGRS47_Rv2741|gene2804|transcript|Transcript_gene2804|Coding|1/1|c.781C>G|p.Pro261Ala|781/1578|781/1578|261/525||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3054694C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3054694C>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:36:6:1:5:7:85.71%:29:1.0823E-3:0:0:0:0:7 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:8:2:6:9:100%:41:7.77E-5:0:0:0:0:9 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:10:2:8:11:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:21:8:13:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:6:2:4:7:100%:29:1.0823E-3:0:0:0:0:8 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:2:8:11:100%:52:5.4125E-6:0:0:0:0:12 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:23:4:19:24:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:12:1:11:13:100%:64:3.698E-7:0:0:0:0:13 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3054752 . C G . PASS AC=154;AF=1.00;AN=154;ANN=G|missense_variant|MODERATE|PE_PGRS47_Rv2741|gene2804|transcript|Transcript_gene2804|Coding|1/1|c.839C>G|p.Ala280Gly|839/1578|839/1578|280/525||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3054752C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3054752C>G||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:19:0:19:20:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:10:1:9:11:90.91%:47:1.7011E-5:35:1:0:1:12 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3055062 . A C . PASS AC=248;AF=0.992;AN=250;ANN=C|synonymous_variant|LOW|PE_PGRS47_Rv2741|gene2804|transcript|Transcript_gene2804|Coding|1/1|c.1149A>C|p.Gly383Gly|1149/1578|1149/1578|383/525||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3055062A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3055062A>C||||||;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:8:0:8:9:88.89%:36:2.0568E-4:37:1:0:1:9 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:23:1:22:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:13:2:11:14:92.86%:64:3.7391E-7:39:1:0:1:15 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:12:0:12:13:92.31%:58:1.3461E-6:39:1:0:1:13 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:16 0/1:36:7:0:7:8:87.5%:31:6.993E-4:38:1:0:1:9 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:36:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:21:1:20:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:33:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:13:0:13:14:92.86%:64:3.7391E-7:37:1:0:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 MTB_anc 3056251 . T G . PASS AC=4;AF=0.013;AN=300;ANN=G|missense_variant|MODERATE|Rv2742c_Rv2742c|gene2805|transcript|Transcript_gene2805|Coding|1/1|c.98A>C|p.Glu33Ala|98/834|98/834|33/277||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3056251T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3056251T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:39:47:28:19:47 0/0:0:0:0:0:12:0%:21:1E0:43:12:6:6:13 1/1:42:43:23:20:44:97.73%:99:1.7144E-24:60:1:1:0:45 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:20:9:29 0/0:0:0:0:0:45:0%:85:1E0:37:45:29:16:47 0/0:0:0:0:0:13:0%:25:1E0:50:13:7:6:13 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:22 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:33 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:19 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:25 0/0:0:0:0:0:51:0%:97:1E0:41:51:31:20:51 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:21 0/0:0:0:0:0:42:0%:77:1E0:40:42:27:15:44 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:22:0%:40:1E0:39:22:15:7:22 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:18:0%:32:1E0:39:18:13:5:18 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:30 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:21:4:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:26 0/0:0:0:0:0:49:0%:93:1E0:40:49:36:13:53 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:40 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:36 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:32 0/0:0:0:0:0:45:0%:85:1E0:40:45:27:18:48 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:26 0/0:0:0:0:0:16:0%:29:1E0:39:16:8:8:18 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:24:12:38 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:25:12:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:40 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:17 0/0:0:0:0:0:38:0%:70:1E0:39:38:27:11:38 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:22 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:31 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:41 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:17:6:24 0/0:0:0:0:0:36:0%:66:1E0:38:36:23:13:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:25:11:37 0/0:0:0:0:0:34:0%:62:1E0:38:34:26:8:38 0/0:0:0:0:0:26:0%:47:1E0:39:26:19:7:27 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:17 0/0:0:0:0:0:46:0%:85:1E0:39:46:29:17:48 0/0:0:0:0:0:55:0%:99:1E0:39:55:36:19:56 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:26 0/0:0:0:0:0:39:0%:74:1E0:39:39:22:17:41 0/0:0:0:0:0:12:0%:21:1E0:43:12:9:3:13 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:31 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:19 0/0:0:0:0:0:25:0%:48:1E0:45:25:20:5:27 0/0:0:0:0:0:38:0%:70:1E0:38:38:27:11:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:18:8:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:28 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:53:0%:99:1E0:39:53:35:18:53 0/0:0:0:0:0:28:0%:51:1E0:36:28:19:9:29 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:32 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:22 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:33 0/0:0:0:0:0:14:0%:25:1E0:43:14:5:9:14 0/0:0:0:0:0:29:0%:55:1E0:39:29:21:8:30 0/0:0:0:0:0:16:0%:29:1E0:40:16:12:4:16 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:30 0/0:0:0:0:0:17:0%:33:1E0:40:17:12:5:17 0/0:0:0:0:0:41:0%:78:1E0:38:41:24:17:43 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:37:36:20:16:36 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:21:6:28 0/0:0:0:0:0:27:0%:52:1E0:36:27:22:5:28 0/0:0:0:0:0:29:0%:55:1E0:36:29:19:10:30 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:26 0/0:0:0:0:0:37:0%:70:1E0:40:37:26:11:37 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 0/0:0:0:0:0:34:0%:62:1E0:40:34:24:10:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:17:7:24 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:34 0/0:0:0:0:0:37:0%:70:1E0:37:37:19:18:38 0/0:0:0:0:0:26:0%:47:1E0:37:26:17:9:27 0/0:0:0:0:0:27:0%:52:1E0:37:27:17:10:29 0/0:0:0:0:0:15:0%:29:1E0:35:15:8:7:18 0/0:0:0:0:0:47:0%:89:1E0:38:47:27:20:50 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:22:8:30 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:22 0/0:0:0:0:0:31:0%:59:1E0:37:31:19:12:31 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:33 0/0:0:0:0:0:39:0%:74:1E0:36:39:22:17:40 0/0:0:0:0:0:22:0%:40:1E0:37:22:7:15:23 0/0:0:0:0:0:39:0%:74:1E0:38:39:25:14:41 0/0:0:0:0:0:28:0%:51:1E0:36:28:21:7:31 0/0:0:0:0:0:33:0%:63:1E0:37:33:20:13:34 0/0:0:0:0:0:24:0%:44:1E0:40:24:18:6:26 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:25 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:23 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:33 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:26 0/0:0:0:0:0:25:0%:48:1E0:36:25:19:6:25 0/0:0:0:0:0:34:0%:62:1E0:36:34:25:9:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:15:7:22 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:36 0/0:34:1:1:0:30:3.33%:44:5E-1:38:29:18:11:30 0/0:0:0:0:0:24:0%:44:1E0:37:24:18:6:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:21 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:24 0/0:0:0:0:0:33:0%:63:1E0:37:33:24:9:33 0/0:0:0:0:0:16:0%:29:1E0:37:16:9:7:16 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:25:17:44 0/0:0:0:0:0:46:0%:85:1E0:38:46:30:16:46 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:28 MTB_anc 3057653 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|35kd_ag_Rv2744c|gene2807|transcript|Transcript_gene2807|Coding|1/1|c.411C>A|p.Val137Val|411/813|411/813|137/270||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3057653G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3057653G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:60:1:0:1:54:1.85%:87:5E-1:42:53:27:26:54 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:52:0%:96:1E0:46:52:24:28:54 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:47:0%:89:1E0:49:47:29:18:47 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:38 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:34:0%:62:1E0:49:34:21:13:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:49 0/0:0:0:0:0:16:0%:29:1E0:49:16:6:10:18 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:34 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:37:1:0:1:32:3.12%:48:5E-1:40:31:14:17:33 0/0:0:0:0:0:67:0%:99:1E0:42:67:32:35:67 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:36 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:42 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:45 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:32 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:42:0%:77:1E0:45:42:19:23:42 0/0:0:0:0:0:48:0%:89:1E0:46:48:23:25:49 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:46 0/0:0:0:0:0:55:0%:99:1E0:46:55:33:22:56 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:42 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:44 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:48:0%:89:1E0:41:48:31:17:48 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:22 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:32 0/0:0:0:0:0:47:0%:89:1E0:45:47:23:24:47 0/0:0:0:0:0:42:0%:77:1E0:44:42:14:28:42 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:23 0/0:0:0:0:0:57:0%:99:1E0:44:57:34:23:57 0/0:0:0:0:0:53:0%:99:1E0:43:53:23:30:54 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:17 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:45 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:49 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:29 0/0:0:0:0:0:58:0%:99:1E0:42:58:30:28:59 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:43 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:39 0/0:0:0:0:0:58:0%:99:1E0:43:58:36:22:58 0/0:0:0:0:0:53:0%:99:1E0:47:53:26:27:54 0/0:0:0:0:0:44:0%:81:1E0:47:44:19:25:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:60:1:0:1:37:2.7%:59:5E-1:46:36:17:19:37 0/0:0:0:0:0:65:0%:99:1E0:47:65:36:29:65 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:33 0/0:60:1:0:1:18:5.56%:24:5E-1:45:17:8:9:18 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:60:1:0:1:51:1.96%:84:5E-1:46:50:27:23:51 1/1:51:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:12:0%:21:1E0:48:12:8:4:12 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:50:0%:92:1E0:41:50:27:23:52 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:31 0/0:0:0:0:0:46:0%:85:1E0:47:46:20:26:46 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:42 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:46 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:33:1:1:0:44:2.27%:69:5E-1:47:43:25:18:44 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:54:0%:99:1E0:44:54:24:30:54 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:43:0%:82:1E0:46:43:24:19:43 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:26:0%:47:1E0:49:26:18:8:27 0/0:0:0:0:0:54:0%:99:1E0:41:54:28:26:55 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:26:14:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:40 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:47 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:45 0/0:0:0:0:0:46:0%:85:1E0:43:46:17:29:46 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:38 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:40 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:51 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:47 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:47 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:64:0%:99:1E0:42:64:34:30:64 0/0:0:0:0:0:60:0%:99:1E0:44:60:31:29:61 0/0:0:0:0:0:31:0%:59:1E0:42:31:9:22:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:48:0%:89:1E0:38:48:24:24:50 0/0:0:0:0:0:50:0%:92:1E0:40:50:34:16:50 0/0:0:0:0:0:53:0%:99:1E0:42:53:28:25:53 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:40 0/0:0:0:0:0:57:0%:99:1E0:40:57:32:25:57 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:42 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:46 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:38 0/0:0:0:0:0:57:0%:99:1E0:39:57:24:33:58 0/0:0:0:0:0:48:0%:89:1E0:40:48:22:26:49 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:45 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:52:0%:96:1E0:37:52:25:27:52 0/0:38:1:1:0:51:1.96%:84:5E-1:42:50:20:30:52 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:43 0/0:0:0:0:0:53:0%:99:1E0:43:53:33:20:53 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:47 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:28:16:45 0/0:0:0:0:0:38:0%:70:1E0:41:38:25:13:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:33 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:52 0/0:0:0:0:0:54:0%:99:1E0:43:54:22:32:54 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 MTB_anc 3061635 . A G . PASS AC=18;AF=0.060;AN=298;ANN=G|missense_variant|MODERATE|ftsK_Rv2748c|gene2811|transcript|Transcript_gene2811|Coding|1/1|c.872T>C|p.Val291Ala|872/2652|872/2652|291/883||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3061635A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3061635A>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:28 0/0:0:0:0:0:9:0%:18:1E0:39:9:5:4:10 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:36 0/0:0:0:0:0:14:0%:25:1E0:40:14:9:5:14 1/1:37:20:9:11:21:95.24%:99:4.0873E-11:39:1:1:0:22 0/0:0:0:0:0:17:0%:33:1E0:39:17:10:7:17 0/0:0:0:0:0:11:0%:22:1E0:50:11:9:2:12 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:19 0/0:0:0:0:0:10:0%:17:1E0:39:10:5:5:12 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:35:0%:67:1E0:37:35:23:12:37 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:37 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:16 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:19 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:19 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:20:0%:36:1E0:37:20:14:6:21 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:25 0/0:0:0:0:0:8:0%:14:1E0:39:8:5:3:8 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:19 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:22:0%:40:1E0:41:22:8:14:23 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:28 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:18 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:17:0%:33:1E0:37:17:2:15:17 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:23 0/0:0:0:0:0:42:0%:77:1E0:38:42:22:20:42 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:41 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:21 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:17 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:25 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:30 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:33 0/0:0:0:0:0:36:0%:66:1E0:38:36:24:12:38 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:15 0/0:0:0:0:0:29:0%:55:1E0:38:29:20:9:29 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:23 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:20 0/0:0:0:0:0:39:0%:74:1E0:37:39:20:19:40 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:24 0/0:29:1:0:1:30:3.33%:44:5E-1:38:29:20:9:30 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:37 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:25 0/0:0:0:0:0:24:0%:44:1E0:38:24:8:16:24 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:21 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:25 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:17 0/0:0:0:0:0:32:0%:59:1E0:38:32:9:23:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:29 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:13:0%:25:1E0:41:13:6:7:13 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:17 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:34 0/0:0:0:0:0:19:0%:37:1E0:40:19:15:4:20 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:25 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:21 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:23 0/0:0:0:0:0:27:0%:52:1E0:38:27:20:7:28 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:21 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:19 0/0:0:0:0:0:12:0%:21:1E0:34:12:8:4:12 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:25 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:16 0/0:0:0:0:0:14:0%:25:1E0:39:14:4:10:14 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:23 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:19 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:30 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:25 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:13 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:36 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:19 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:17 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:30:0%:55:1E0:37:30:21:9:34 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 0/0:0:0:0:0:12:0%:21:1E0:43:12:6:6:13 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:21 0/0:0:0:0:0:32:0%:59:1E0:37:32:20:12:34 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:28 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:17 0/0:0:0:0:0:21:0%:40:1E0:39:21:16:5:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:19 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:23 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:23 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:26 0/0:0:0:0:0:23:0%:44:1E0:38:23:18:5:23 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:36:25:15:10:29 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:33 0/0:0:0:0:0:14:0%:25:1E0:36:14:10:4:16 0/0:0:0:0:0:29:0%:55:1E0:36:29:20:9:31 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:9 0/0:0:0:0:0:41:0%:78:1E0:38:41:23:18:41 0/0:0:0:0:0:33:0%:63:1E0:37:33:17:16:33 0/0:0:0:0:0:13:0%:25:1E0:39:13:6:7:14 0/0:0:0:0:0:20:0%:36:1E0:36:20:7:13:20 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:29 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:28 0/0:0:0:0:0:33:0%:63:1E0:37:33:18:15:34 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:34 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:32 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:17 0/0:0:0:0:0:32:0%:59:1E0:37:32:20:12:33 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:24 0/0:0:0:0:0:33:0%:63:1E0:36:33:17:16:38 0/0:0:0:0:0:25:0%:48:1E0:36:25:14:11:28 0/0:0:0:0:0:30:0%:55:1E0:36:30:14:16:32 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:25 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:24 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:28 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:25 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:21 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:12 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:22 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:22 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:29 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:35 MTB_anc 3064595 . C T . PASS AC=64;AF=0.213;AN=300;ANN=T|missense_variant|MODERATE|Rv2752c_Rv2752c|gene2815|transcript|Transcript_gene2815|Coding|1/1|c.1597G>A|p.Val533Met|1597/1677|1597/1677|533/558||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3064595C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3064595C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:38:0%:70:1E0:48:38:23:15:40 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:33:1:1:0:21:4.76%:31:5E-1:51:20:12:8:23 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:7:14:21 0/0:0:0:0:0:42:0%:77:1E0:44:42:29:13:42 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:17:0%:33:1E0:46:17:12:5:18 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:19 0/0:0:0:0:0:14:0%:25:1E0:44:14:7:7:15 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:50 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:30 0/0:0:0:0:0:18:0%:32:1E0:52:18:10:8:18 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:21 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:20 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:48 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:42 0/0:0:0:0:0:54:0%:99:1E0:46:54:27:27:54 1/1:45:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:47 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:19 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:25:17:42 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:42 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:18 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:32:0%:59:1E0:37:32:24:8:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:36 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:32:0%:59:1E0:49:32:20:12:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:35 0/0:0:0:0:0:41:0%:78:1E0:47:41:23:18:41 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:43 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:14 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:40:0%:74:1E0:48:40:20:20:40 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:31 0/0:38:1:1:0:33:3.03%:52:5E-1:42:32:17:15:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:40 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:46 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:22:0%:40:1E0:49:22:9:13:23 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:43 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:37:1:1:0:21:4.76%:31:5E-1:47:20:11:9:21 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:42:0%:77:1E0:38:42:27:15:43 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:38 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:31 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:8:18:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:28 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:23 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:49:31:18:49:100%:99:3.925E-29:0:0:0:0:51 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:52:0%:96:1E0:39:52:32:20:53 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:42 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:20 0/0:0:0:0:0:13:0%:25:1E0:41:13:8:5:14 0/0:0:0:0:0:51:0%:97:1E0:38:51:25:26:53 1/1:39:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 0/0:0:0:0:0:33:0%:63:1E0:37:33:23:10:34 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:36 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:30 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:55:0%:99:1E0:39:55:27:28:59 0/0:0:0:0:0:50:0%:92:1E0:40:50:27:23:50 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:45:0%:85:1E0:42:45:27:18:46 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 1/1:45:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:40 0/0:0:0:0:0:47:0%:89:1E0:42:47:30:17:47 0/0:0:0:0:0:57:0%:99:1E0:40:57:36:21:58 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 MTB_anc 3069805 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|hsdM_Rv2756c|gene2818|transcript|Transcript_gene2818|Coding|1/1|c.279G>C|p.Val93Val|279/1623|279/1623|93/540||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3069805C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3069805C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:53:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:63:31:32:63:100%:99:1.657E-37:0:0:0:0:64 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:52:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:52:32:13:19:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:55:19:36:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:56:25:31:57:98.25%:99:2.5602E-33:0:0:0:0:58 1/1:42:60:24:36:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 3072567 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|hsdS_Rv2761c|gene2823|transcript|Transcript_gene2823|Coding|1/1|c.74G>T|p.Gly25Val|74/1095|74/1095|25/364||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3072567C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3072567C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:51:36:15:52:98.08%:99:3.3479E-29:32:1:1:0:53 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:53:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:53:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:22:12:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:48:32:16:48:100%:99:1.554E-28:0:0:0:0:52 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:67:42:25:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:14:8:6:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:43:26:17:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 3078826 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|PE27_Rv2769c|gene2831|transcript|Transcript_gene2831|Coding|1/1|c.160T>C|p.Ser54Pro|160/828|160/828|54/275||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3078826A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3078826A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:60:28:32:60:100%:99:1.035E-35:0:0:0:0:65 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:33:18:15:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:52:25:27:54:96.3%:99:6.3169E-31:0:0:0:0:54 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:34:21:13:36:94.44%:99:3.5146E-20:0:0:0:0:38 1/1:44:26:11:15:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:36:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:36:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:37:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 MTB_anc 3079576 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|PPE44_Rv2770c|gene2832|transcript|Transcript_gene2832|Coding|1/1|c.882C>T|p.Val294Val|882/1149|882/1149|294/382||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3079576G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3079576G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:48:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:28 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:43:15:28:44:97.73%:99:1.7144E-24:39:1:1:0:45 1/1:45:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:45 1/1:46:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:67 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:41 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:53 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:35:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:55 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:36 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:38:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:49:26:23:49:100%:99:3.925E-29:0:0:0:0:52 1/1:37:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:34:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:35:48:21:27:48:100%:99:1.554E-28:0:0:0:0:57 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:39:22:17:40:97.5%:99:3.8137E-22:36:1:1:0:41 MTB_anc 3079877 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PPE44_Rv2770c|gene2832|transcript|Transcript_gene2832|Coding|1/1|c.581C>T|p.Ser194Phe|581/1149|581/1149|194/382||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3079877G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3079877G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:50:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:48:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:51 1/1:50:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:51:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:61:28:33:61:100%:99:2.609E-36:0:0:0:0:62 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:39:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:36:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:61:27:34:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:44:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 3083532 . T A . PASS AC=72;AF=0.240;AN=300;ANN=A|missense_variant|MODERATE|Rv2776c_Rv2776c|gene2838|transcript|Transcript_gene2838|Coding|1/1|c.772A>T|p.Thr258Ser|772/930|772/930|258/309||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3083532T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3083532T>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:45 0/0:0:0:0:0:23:0%:44:1E0:45:23:16:7:23 0/0:33:1:0:1:38:2.63%:58:5E-1:46:37:26:11:38 0/0:0:0:0:0:23:0%:44:1E0:47:23:18:5:25 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:39:0%:74:1E0:50:39:17:22:39 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:35 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:29:0%:55:1E0:45:29:9:20:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:32:1:0:1:27:3.7%:41:5E-1:45:26:13:13:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:39 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:20 1/1:44:26:16:10:28:92.86%:99:5.6872E-14:46:2:1:1:29 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:46 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:34 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:22 1/1:48:21:13:8:22:95.45%:99:1.0931E-11:60:1:1:0:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:28 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:34:1:0:1:39:2.56%:62:5E-1:41:38:22:16:40 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:23:0%:44:1E0:36:23:14:9:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:48:0%:89:1E0:45:48:20:28:50 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:47 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:43 0/0:0:0:0:0:29:0%:55:1E0:37:29:19:10:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:27 1/1:37:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:20 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:31 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:36 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:15 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:23:10:33 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:20 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:12:25:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:38 1/1:49:30:15:15:31:96.77%:99:6.8754E-17:38:1:1:0:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:31 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:40 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:22 0/0:35:1:1:0:28:3.57%:41:5E-1:42:27:16:11:28 1/1:49:32:14:18:33:96.97%:99:4.7095E-18:32:1:1:0:34 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:15 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:10:0%:17:1E0:51:10:5:5:10 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:22:0%:40:1E0:39:22:18:4:23 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:14:0%:25:1E0:43:14:9:5:15 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:41 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:17 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:17 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:32 0/0:0:0:0:0:36:0%:66:1E0:37:36:18:18:39 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:19 0/0:0:0:0:0:54:0%:99:1E0:39:54:25:29:54 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:27 1/1:40:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:26:0%:47:1E0:39:26:9:17:30 0/0:0:0:0:0:53:0%:99:1E0:39:53:18:35:55 0/0:0:0:0:0:30:0%:55:1E0:36:30:13:17:33 0/0:0:0:0:0:52:0%:96:1E0:39:52:24:28:54 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:39 0/0:0:0:0:0:39:0%:74:1E0:37:39:14:25:42 0/0:0:0:0:0:39:0%:74:1E0:38:39:17:22:39 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:37 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 0/0:0:0:0:0:53:0%:99:1E0:37:53:25:28:56 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:42 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 1/1:38:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 0/0:0:0:0:0:35:0%:67:1E0:42:35:24:11:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:58 0/0:0:0:0:0:37:0%:70:1E0:41:37:10:27:38 MTB_anc 3086208 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv2778c_Rv2778c-Rv2779c_Rv2779c|gene2840-gene2841|intergenic_region|gene2840-gene2841|||n.3086208G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:33:17:16:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:20:9:11:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:65:35:30:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:48:33:24:9:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:52:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:67:39:28:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:41:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:41:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:55:31:24:56:98.21%:99:1.4593E-31:60:1:0:1:56 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 3088625 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2781c_Rv2781c|gene2843|transcript|Transcript_gene2843|Coding|1/1|c.360C>T|p.Val120Val|360/1035|360/1035|120/344||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3088625G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3088625G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:63:33:30:63:100%:99:1.657E-37:0:0:0:0:64 1/1:53:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:38:29:9:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:53:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:47:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:60:30:30:60:100%:99:1.035E-35:0:0:0:0:62 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:67:33:34:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 3089696 . C G . PASS AC=299;AF=0.997;AN=300;ANN=G|missense_variant|MODERATE|pepR_Rv2782c|gene2844|transcript|Transcript_gene2844|Coding|1/1|c.666G>C|p.Leu222Phe|666/1317|666/1317|222/438||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3089696C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3089696C>G||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:18:6:12:19:94.74%:92:5.6585E-10:33:1:1:0:19 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:22:13:9:23:95.65%:99:4.7526E-13:0:0:0:0:24 1/1:45:44:23:21:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:13:14:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:49:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:15:9:6:16:100%:81:6.4467E-9:0:0:0:0:17 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 0/1:48:16:7:9:18:88.89%:87:1.6637E-9:0:0:0:0:18 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:29:12:17:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:47:24:23:48:97.92%:99:6.1512E-28:0:0:0:0:48 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:61:37:24:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 3090983 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|gpsI_Rv2783c|gene2845|transcript|Transcript_gene2845|Coding|1/1|c.1615G>A|p.Ala539Thr|1615/2259|1615/2259|539/752||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3090983C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3090983C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|pyrazinamide|||n.3090983C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:68:0%:99:1E0:43:68:30:38:68 0/0:0:0:0:0:18:0%:32:1E0:51:18:11:7:18 0/0:0:0:0:0:57:0%:99:1E0:44:57:28:29:58 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:60:1:0:1:39:2.56%:62:5E-1:50:38:26:12:39 0/0:60:1:0:1:34:2.94%:51:5E-1:48:33:14:19:35 0/1:43:12:6:6:36:33.33%:40:8.1472E-5:50:24:13:11:38 0/0:0:0:0:0:20:0%:36:1E0:51:20:11:9:20 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:20:0%:36:1E0:44:20:5:15:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:33 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:43 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:60:1:0:1:37:2.7%:59:5E-1:45:36:11:25:38 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:26 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:15 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:11:0%:22:1E0:45:11:7:4:11 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:27 0/0:0:0:0:0:39:0%:74:1E0:48:39:11:28:39 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:34 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:15:28:43 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:24 0/0:0:0:0:0:54:0%:99:1E0:47:54:25:29:57 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:30 0/0:0:0:0:0:12:0%:21:1E0:44:12:8:4:12 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:37:1:0:1:26:3.85%:38:5E-1:42:25:13:12:26 0/0:38:1:1:0:44:2.27%:69:5E-1:45:43:25:18:44 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:38:0%:70:1E0:49:38:22:16:39 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:38:1:0:1:23:4.35%:34:5E-1:48:22:13:9:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:18:7:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:38:1:0:1:40:2.5%:62:5E-1:45:39:14:25:40 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:49:0%:93:1E0:46:49:24:25:50 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:37 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:17 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:23:0%:44:1E0:50:23:12:11:23 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:35 0/0:0:0:0:0:39:0%:74:1E0:47:39:16:23:39 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:37:0%:70:1E0:49:37:19:18:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:44 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:25:0%:48:1E0:50:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:28:0%:51:1E0:49:28:18:10:28 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:60:1:0:1:20:5%:27:5E-1:49:19:9:10:20 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:49:0%:93:1E0:43:49:36:13:49 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:25 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:33 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:24 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:34:0%:62:1E0:46:34:24:10:34 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:21 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:21 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:40 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:22 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:41 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:23 0/0:0:0:0:0:62:0%:99:1E0:42:62:32:30:62 0/0:0:0:0:0:56:0%:99:1E0:43:56:30:26:57 0/0:0:0:0:0:15:0%:29:1E0:42:15:10:5:15 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:47 0/0:0:0:0:0:31:0%:59:1E0:40:31:21:10:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:29 0/0:0:0:0:0:46:0%:85:1E0:39:46:26:20:46 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:30 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:46 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:30 0/0:0:0:0:0:31:0%:59:1E0:37:31:12:19:31 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:55:0%:99:1E0:39:55:29:26:56 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:27 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:48 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:38 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:34 MTB_anc 3091595 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|gpsI_Rv2783c|gene2845|transcript|Transcript_gene2845|Coding|1/1|c.1003C>T|p.Leu335Leu|1003/2259|1003/2259|335/752||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3091595G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3091595G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|pyrazinamide|||n.3091595G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:53 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:37:30:7:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:15:10:5:16:100%:81:6.4467E-9:0:0:0:0:18 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:38:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:45 1/1:37:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:43:33:10:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:38:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:51:37:14:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:36:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:38 MTB_anc 3095351 . G A . PASS AC=18;AF=0.060;AN=300;ANN=A|missense_variant|MODERATE|Rv2787_Rv2787|gene2849|transcript|Transcript_gene2849|Coding|1/1|c.241G>A|p.Glu81Lys|241/1764|241/1764|81/587||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3095351G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3095351G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:40:46:28:18:47 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:49:0%:93:1E0:41:49:25:24:49 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:30 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:37 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:26 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:36 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:33 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:49:20:6:14:21 0/0:0:0:0:0:20:0%:36:1E0:38:20:14:6:21 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:37 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:35 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:24 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:24 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 0/0:0:0:0:0:66:0%:99:1E0:40:66:42:24:67 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/0:0:0:0:0:46:0%:85:1E0:40:46:26:20:46 0/0:0:0:0:0:31:0%:59:1E0:40:31:21:10:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:50:0%:92:1E0:40:50:30:20:50 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:44 0/0:0:0:0:0:18:0%:32:1E0:42:18:14:4:18 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:38:33:20:13:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:35 0/0:0:0:0:0:56:0%:99:1E0:41:56:27:29:56 0/0:0:0:0:0:32:0%:59:1E0:39:32:23:9:33 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:44:0%:81:1E0:40:44:31:13:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:42 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:37 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:19:7:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:25:9:34 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:36 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:18 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:30 0/0:0:0:0:0:23:0%:44:1E0:48:23:15:8:23 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:19 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:13:0%:25:1E0:41:13:4:9:13 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:44:0%:81:1E0:39:44:33:11:44 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:21 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:22 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:31 0/0:0:0:0:0:46:0%:85:1E0:37:46:30:16:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:21:0%:40:1E0:38:21:17:4:21 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:39 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:35 0/0:38:1:1:0:19:5.26%:28:5E-1:40:18:14:4:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:30 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:39 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:43:0%:82:1E0:38:43:24:19:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:47 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:39:0%:74:1E0:37:39:25:14:40 0/0:38:1:0:1:40:2.5%:62:5E-1:42:39:21:18:40 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:29 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:17:5:22 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:25 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:37 0/0:0:0:0:0:20:0%:36:1E0:37:20:14:6:21 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:23 0/0:0:0:0:0:45:0%:85:1E0:38:45:29:16:45 0/0:0:0:0:0:29:0%:55:1E0:36:29:21:8:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:19:0%:37:1E0:40:19:5:14:19 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:49 0/0:0:0:0:0:39:0%:74:1E0:39:39:27:12:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:17:0%:33:1E0:40:17:14:3:20 0/0:0:0:0:0:47:0%:89:1E0:36:47:29:18:50 0/0:0:0:0:0:39:0%:74:1E0:39:39:26:13:41 0/0:0:0:0:0:36:0%:66:1E0:39:36:24:12:36 0/0:0:0:0:0:39:0%:74:1E0:38:39:27:12:40 0/0:0:0:0:0:43:0%:82:1E0:37:43:26:17:45 0/0:0:0:0:0:34:0%:62:1E0:38:34:21:13:34 0/0:0:0:0:0:42:0%:77:1E0:39:42:24:18:43 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:38 0/0:0:0:0:0:48:0%:89:1E0:37:48:29:19:49 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:40 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:28 0/0:0:0:0:0:38:0%:70:1E0:38:38:29:9:38 0/0:0:0:0:0:44:0%:81:1E0:39:44:27:17:44 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:34:0%:62:1E0:38:34:24:10:38 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:30 0/0:0:0:0:0:41:0%:78:1E0:37:41:27:14:41 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:42 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:33 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:15 1/1:40:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:33:20:13:34:97.06%:99:1.2301E-18:60:1:0:1:34 0/0:0:0:0:0:44:0%:81:1E0:38:44:25:19:45 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:35 MTB_anc 3096807 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv2787_Rv2787|gene2849|transcript|Transcript_gene2849|Coding|1/1|c.1697G>T|p.Ser566Ile|1697/1764|1697/1764|566/587||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3096807G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3096807G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:45:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:18:9:9:19:94.74%:92:5.6585E-10:37:1:0:1:19 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:66:34:32:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:48:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:53:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:43:27:16:44:97.73%:99:1.5066E-25:0:0:0:0:45 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:62:31:31:63:98.41%:99:1.0605E-35:50:1:0:1:64 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:60:30:30:60:100%:99:1.035E-35:0:0:0:0:62 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 3104189 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2795c_Rv2795c|gene2857|transcript|Transcript_gene2857|Coding|1/1|c.723C>T|p.Cys241Cys|723/975|723/975|241/324||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3104189G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3104189G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:51:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:51 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:75:44:31:75:100%:99:1.0773E-44:0:0:0:0:77 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:52:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:48:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:53:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:52:36:16:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:48:20:28:48:100%:99:1.554E-28:0:0:0:0:54 1/1:42:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:44 1/1:40:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:49:23:26:50:98%:99:5.0549E-28:37:1:0:1:50 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:31:17:14:32:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 3105144 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|lppV_Rv2796c|gene2858|transcript|Transcript_gene2858|Coding|1/1|c.476T>G|p.Phe159Cys|476/564|476/564|159/187||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3105144A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3105144A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:50:16:34:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:48:16:32:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:31:4:27:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:31:6:25:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:61:32:29:61:100%:99:2.609E-36:0:0:0:0:63 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:23:7:16:24:95.83%:99:7.7525E-13:39:1:0:1:24 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:36:12:24:37:97.3%:99:2.1762E-20:60:1:0:1:39 1/1:39:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:38:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 3108453 . T C . PASS AC=124;AF=0.413;AN=300;ANN=C|missense_variant|MODERATE|Rv2800_Rv2800|gene2862|transcript|Transcript_gene2862|Coding|1/1|c.38T>C|p.Leu13Pro|38/1650|38/1650|13/549||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3108453T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3108453T>C||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:60:0%:99:1E0:41:60:37:23:61 1/1:47:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:22:7:29 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:23 1/1:43:24:20:4:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:24:0%:44:1E0:46:24:17:7:24 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:31:0%:59:1E0:44:31:22:9:32 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:20:0%:36:1E0:43:20:14:6:20 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 1/1:39:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:24 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:28:0%:51:1E0:38:28:19:9:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:23:8:31 1/1:40:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 0/0:0:0:0:0:39:0%:74:1E0:41:39:28:11:39 1/1:40:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:27:0%:52:1E0:38:27:20:7:27 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:30:8:38 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:27:0%:52:1E0:43:27:21:6:27 1/1:39:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:34:19:15:36:97.14%:99:3.5146E-20:0:0:0:0:38 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:36 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:22:6:28 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:26:11:38:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:15:0%:29:1E0:39:15:11:4:16 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:26:7:33 0/0:0:0:0:0:59:0%:99:1E0:42:59:42:17:60 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 1/1:45:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:29:10:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:27:14:41 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:33 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:40:0%:74:1E0:41:40:27:13:40 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:38:1:1:0:33:3.03%:52:5E-1:44:32:16:16:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:41 0/0:0:0:0:0:34:0%:62:1E0:42:34:25:9:35 1/1:47:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 1/1:42:21:12:9:22:95.45%:99:1.0931E-11:60:1:1:0:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:27:8:35 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:31:0%:59:1E0:39:31:23:8:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:23:11:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:17:6:23 0/0:0:0:0:0:31:0%:59:1E0:41:31:22:9:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:43 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:46:0%:85:1E0:41:46:30:16:46 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:21 0/0:0:0:0:0:27:0%:52:1E0:37:27:19:8:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:25:9:34 0/0:0:0:0:0:43:0%:82:1E0:37:43:27:16:44 0/0:0:0:0:0:21:0%:40:1E0:37:21:13:8:23 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:25 0/0:0:0:0:0:40:0%:74:1E0:39:40:26:14:42 0/0:0:0:0:0:46:0%:85:1E0:38:46:32:14:46 0/0:0:0:0:0:26:0%:47:1E0:40:26:18:8:28 0/0:0:0:0:0:19:0%:37:1E0:40:19:12:7:19 0/0:0:0:0:0:52:0%:96:1E0:37:52:41:11:56 0/0:0:0:0:0:26:0%:47:1E0:41:26:19:7:27 0/0:0:0:0:0:47:0%:89:1E0:41:47:35:12:47 0/0:0:0:0:0:43:0%:82:1E0:39:43:36:7:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:43:0%:82:1E0:40:43:32:11:43 0/0:0:0:0:0:43:0%:82:1E0:38:43:30:13:45 0/0:0:0:0:0:29:0%:55:1E0:40:29:21:8:30 0/0:0:0:0:0:43:0%:82:1E0:39:43:27:16:44 0/0:0:0:0:0:25:0%:48:1E0:42:25:18:7:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:23:6:29 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:21 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:34 1/1:36:39:31:8:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:41:0%:78:1E0:38:41:25:16:41 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:28:10:38 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:38:0%:70:1E0:37:38:23:15:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 3109457 . G A . PASS AC=286;AF=1.00;AN=286;ANN=A|missense_variant|MODERATE|Rv2800_Rv2800|gene2862|transcript|Transcript_gene2862|Coding|1/1|c.1042G>A|p.Gly348Ser|1042/1650|1042/1650|348/549||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3109457G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3109457G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:53:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:46:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:49:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:48:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:11:10:22:95.45%:99:1.8578E-12:0:0:0:0:23 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:50:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:50:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 MTB_anc 3112877 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2804c_Rv2804c|gene2867|transcript|Transcript_gene2867|Coding|1/1|c.218T>C|p.Val73Ala|218/630|218/630|73/209||,G|missense_variant|MODERATE|Rv2805_Rv2805|gene2868|transcript|Transcript_gene2868|Coding|1/1|c.11A>G|p.Asp4Gly|11/405|11/405|4/134||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3112877A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3112877A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:38:21:17:39:97.44%:99:1.4697E-21:60:1:0:1:39 1/1:51:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:27:11:16:30:93.1%:99:1.5465E-14:48:2:1:1:30 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:60:27:33:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:43:31:12:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:27:12:15:28:96.43%:99:5.1363E-16:0:0:0:0:30 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:53 1/1:43:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:36:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:68:33:35:68:100%:99:1.6809E-40:0:0:0:0:71 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:49:22:27:50:98%:99:3.925E-29:0:0:0:0:50 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 3117832 . G C . PASS AC=68;AF=0.227;AN=300;ANN=C|missense_variant|MODERATE|Rv2812_Rv2812|gene2874|transcript|Transcript_gene2874|Coding|1/1|c.1015G>C|p.Glu339Gln|1015/1410|1015/1410|339/469||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3117832G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3117832G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:34:0%:62:1E0:41:34:23:11:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:21 1/1:44:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:13:22:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:19 0/0:0:0:0:0:37:0%:70:1E0:45:37:9:28:40 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:20 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:17 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:45 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:39:1:1:0:36:2.78%:55:5E-1:39:35:12:23:36 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:8:17:26 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:41 0/0:0:0:0:0:60:0%:99:1E0:48:60:36:24:60 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:42:0%:77:1E0:46:42:15:27:42 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:39:1:1:0:37:2.7%:59:5E-1:43:36:24:12:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:47 0/0:60:1:0:1:43:2.33%:70:5E-1:46:42:19:23:43 0/0:0:0:0:0:20:0%:36:1E0:49:20:12:8:20 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:45 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:48 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:27 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:45 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:21:7:28 0/0:0:0:0:0:28:0%:51:1E0:47:28:9:19:29 0/0:0:0:0:0:49:0%:93:1E0:46:49:24:25:51 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:45 0/0:0:0:0:0:8:0%:14:1E0:53:8:4:4:8 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:38:1:0:1:25:4%:38:5E-1:50:24:17:7:25 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:39 0/0:0:0:0:0:21:0%:40:1E0:44:21:5:16:21 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:14 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:33 0/0:0:0:0:0:20:0%:36:1E0:50:20:12:8:20 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:47 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:17 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:44 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:18 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:23:11:35 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:36 0/0:38:1:1:0:20:5%:27:5E-1:42:19:8:11:20 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:27 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:30 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:18 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:48 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:52 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:35 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:38 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:31 0/0:0:0:0:0:30:0%:55:1E0:36:30:15:15:31 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:47:0%:89:1E0:39:47:27:20:48 0/0:0:0:0:0:30:0%:55:1E0:38:30:10:20:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:21 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:44 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 MTB_anc 3118449 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2813_Rv2813|gene2875|transcript|Transcript_gene2875|Coding|1/1|c.226G>A|p.Val76Ile|226/813|226/813|76/270||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3118449G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3118449G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:18:31:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:47:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:12:20:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:63:26:37:63:100%:99:1.657E-37:0:0:0:0:65 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:49:16:33:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:60:23:37:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 3119513 . T C . PASS AC=299;AF=0.997;AN=300;ANN=C|intergenic_region|MODIFIER|Rv2813_Rv2813-Rv2816c_Rv2816c|gene2875-gene2876|intergenic_region|gene2875-gene2876|||n.3119513T>C||||||;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:57:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:16:3:13:17:94.12%:81:7.7134E-9:37:1:0:1:18 1/1:41:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:39:12:27:40:97.5%:99:3.8137E-22:39:1:0:1:40 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:38:31:5:26:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:46:9:37:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:41:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:24:9:15:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:41:19:9:10:20:95%:98:1.5234E-10:60:1:0:1:20 1/1:39:19:5:14:20:95%:98:1.5234E-10:39:1:0:1:20 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:34:15:19:35:97.14%:99:3.2089E-19:37:1:1:0:36 0/1:39:15:3:12:17:88.24%:71:7.3277E-8:49:2:1:1:18 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:56:17:39:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:42:14:4:10:15:93.33%:69:1.0315E-7:60:1:1:0:15 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:21:9:12:22:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:22:10:12:23:95.65%:99:2.9149E-12:60:1:1:0:26 1/1:40:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:41:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:34:11:23:35:97.14%:99:3.2089E-19:32:1:0:1:35 1/1:36:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:49 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:35:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:39:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:36:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:36:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:35:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 MTB_anc 3122943 . A G . PASS AC=296;AF=1.00;AN=296;ANN=G|intergenic_region|MODIFIER|Rv2813_Rv2813-Rv2816c_Rv2816c|gene2875-gene2876|intergenic_region|gene2875-gene2876|||n.3122943A>G||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:15:7:8:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:50:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:51:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:52:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:17:11:6:18:100%:93:4.2852E-10:0:0:0:0:19 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:26:14:12:27:96.3%:99:1.4382E-14:38:1:0:1:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:26:10:16:27:96.3%:99:1.4382E-14:60:1:1:0:29 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:50:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:34 1/1:41:39:22:17:40:100%:99:3.6742E-23:0:0:0:0:42 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:54:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:35:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:35:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:37:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:25:6:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 3122949 . C T . PASS AC=298;AF=1.00;AN=298;ANN=T|intergenic_region|MODIFIER|Rv2813_Rv2813-Rv2816c_Rv2816c|gene2875-gene2876|intergenic_region|gene2875-gene2876|||n.3122949C>T||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:51:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:51:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:54:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:41:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:48:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:57:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 3122951 . T A . PASS AC=298;AF=1.00;AN=298;ANN=A|intergenic_region|MODIFIER|Rv2813_Rv2813-Rv2816c_Rv2816c|gene2875-gene2876|intergenic_region|gene2875-gene2876|||n.3122951T>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:53:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:24 1/1:43:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:51:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:51:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:47:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:53:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:16 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:17:10:7:18:94.44%:86:2.0936E-9:60:1:0:1:19 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:56:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:16 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:20:13:7:21:95.24%:99:7.2544E-12:0:0:0:0:27 1/1:35:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:33:13:20:34:97.06%:99:1.3852E-19:0:0:0:0:39 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:34 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 MTB_anc 3131473 . C CGGCGATGTA . PASS AC=186;AF=0.620;AN=300;ANN=CGGCGATGTA|inframe_insertion|MODERATE|Rv2823c_Rv2823c|gene2883|transcript|Transcript_gene2883|Coding|1/1|c.292_300dupTACATCGCC|p.Ala100_Asp101insTyrIleAla|300/2430|300/2430|100/809||,CGGCGATGTA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3131473_3131474insGGCGATGTA||||||,CGGCGATGTA|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3131473_3131474insGGCGATGTA||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:41:35:12:23:39:89.74%:99:4.5343E-18:39:4:2:2:40 0/1:40:16:9:7:20:80%:71:7.7086E-8:35:4:2:2:23 1/1:39:30:13:17:30:93.75%:99:3.0612E-16:34:2:2:0:34 0/1:38:13:6:7:15:86.67%:64:3.7391E-7:36:1:0:1:15 1/1:38:26:7:19:26:96.3%:99:1.4382E-14:38:1:0:1:27 0/1:37:18:7:11:21:78.26%:79:1.1937E-8:36:5:2:3:23 0/1:42:23:13:10:26:88.46%:99:7.3681E-12:36:3:1:2:26 0/1:36:21:7:14:24:87.5%:99:9.0704E-11:41:3:2:1:24 0/1:38:15:8:7:18:83.33%:68:1.4655E-7:34:3:1:2:18 0/1:40:17:10:7:20:80.95%:82:5.9414E-9:31:2:2:0:21 0/1:38:22:11:11:28:75.86%:95:2.7763E-10:33:7:3:4:31 0/1:38:40:15:25:49:81.63%:99:2.2074E-19:32:8:5:3:49 1/1:36:21:5:16:23:91.3%:99:3.6437E-11:35:2:2:0:24 0/1:37:35:13:22:43:81.4%:99:9.5933E-17:36:8:6:2:44 0/1:38:15:10:5:19:78.95%:66:2.5053E-7:34:4:2:2:19 0/1:37:24:13:11:27:88.89%:99:2.0853E-12:36:3:1:2:27 0/1:38:10:4:6:13:76.92%:42:5.3843E-5:35:3:0:3:13 0/1:37:13:3:10:17:76.47%:55:2.5647E-6:32:4:4:0:17 0/1:33:12:6:6:14:70.59%:49:1.1285E-5:38:5:3:2:17 0/1:37:15:8:7:21:71.43%:64:3.8543E-7:36:5:3:2:25 0/1:35:15:5:10:18:83.33%:71:7.3277E-8:35:2:1:1:18 0/1:38:38:15:23:47:80.85%:99:4.6601E-18:35:9:5:4:51 1/1:38:22:8:14:22:95.65%:99:4.7526E-13:0:0:0:0:25 0/1:41:23:8:15:28:82.14%:99:3.103E-11:33:5:2:3:28 0/1:40:21:5:16:26:80.77%:94:3.4262E-10:31:5:4:1:27 0/1:34:15:7:8:17:78.95%:66:2.5053E-7:42:4:2:2:19 1/1:39:16:6:10:17:94.12%:81:7.7134E-9:38:1:0:1:19 0/1:45:15:8:7:25:60%:59:1.196E-6:33:9:4:5:25 1/1:40:18:7:11:19:94.74%:92:5.6585E-10:32:1:0:1:20 0/1:41:24:12:12:30:80%:99:1.647E-11:34:6:4:2:30 1/1:39:20:13:7:21:90.91%:98:1.3117E-10:32:2:2:0:22 0/1:43:31:18:13:35:88.57%:99:7.3316E-16:34:4:3:1:37 0/1:42:17:6:11:23:73.91%:74:3.8368E-8:36:5:5:0:23 0/1:38:19:6:13:25:76%:84:3.6826E-9:39:5:4:1:26 0/1:40:21:14:7:24:87.5%:99:9.0704E-11:37:3:2:1:25 0/1:40:26:16:10:30:86.67%:99:3.9214E-13:34:4:3:1:30 0/1:42:19:8:11:24:79.17%:86:2.1316E-9:42:4:2:2:24 0/1:37:38:16:22:48:77.55%:99:4.6601E-18:40:9:4:5:49 1/1:41:30:19:11:31:93.75%:99:3.0612E-16:34:2:2:0:32 0/1:37:31:12:19:34:88.57%:99:7.3316E-16:35:4:2:2:35 0/1:38:18:11:7:21:81.82%:81:7.1052E-9:33:4:3:1:22 0/1:41:35:19:16:41:85.37%:99:2.5278E-17:34:6:2:4:42 0/1:39:20:7:13:26:76.92%:87:1.8273E-9:37:6:2:4:26 1/1:41:10:4:6:11:90.91%:47:1.7011E-5:38:1:0:1:11 0/1:38:22:9:13:25:84.62%:99:5.5261E-11:34:4:2:2:26 0/1:42:21:13:8:23:87.5%:99:9.0704E-11:34:3:1:2:26 0/1:43:12:3:9:16:75%:50:8.0605E-6:43:4:3:1:16 0/1:39:35:17:18:39:89.74%:99:4.5343E-18:37:4:4:0:39 0/1:40:22:11:11:29:75.86%:95:2.7763E-10:38:7:5:2:30 0/1:40:31:14:17:37:83.78%:99:7.3316E-16:34:4:3:1:38 0/1:39:11:7:4:13:84.62%:53:4.8074E-6:38:1:0:1:13 0/1:36:26:12:14:31:78.79%:99:2.5824E-12:38:7:6:1:33 0/1:42:7:4:3:9:77.78%:29:1.1312E-3:36:2:1:1:10 1/1:40:25:11:14:25:96.15%:99:5.4444E-14:37:1:1:0:27 0/1:37:13:4:9:17:76.47%:55:2.5647E-6:35:4:3:1:17 0/1:38:37:18:19:46:80.43%:99:8.5365E-18:32:8:6:2:46 0/1:39:27:6:21:37:71.05%:99:4.2271E-12:36:11:7:4:39 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 0/1:38:33:15:18:36:84.62%:99:2.9926E-16:33:6:2:4:41 0/1:39:25:13:12:30:83.33%:99:2.745E-12:38:5:3:2:30 1/1:37:29:13:16:30:93.55%:99:1.1344E-15:28:2:1:1:33 0/1:38:17:10:7:20:80.95%:78:1.2848E-8:39:3:2:1:22 0/1:39:27:11:16:32:84.38%:99:2.3785E-13:30:5:2:3:34 1/1:36:19:8:11:20:90.48%:93:4.7003E-10:35:2:1:1:21 0/1:39:29:10:19:35:82.86%:99:4.008E-14:40:6:4:2:35 0/1:38:39:17:22:44:86.67%:99:1.7346E-19:32:6:3:3:46 0/1:38:14:11:3:20:66.67%:56:2.1998E-6:36:7:1:6:21 0/1:40:28:17:11:32:87.5%:99:3.2142E-14:36:4:3:1:35 0/1:38:12:3:9:14:85.71%:55:2.9913E-6:49:2:2:0:15 0/1:49:12:7:5:18:66.67%:49:1.1285E-5:41:5:4:1:19 0/1:40:14:11:3:18:77.78%:60:8.0605E-7:35:4:4:0:19 0/1:43:14:7:7:21:66.67%:57:1.6702E-6:43:6:4:2:21 0/1:43:10:5:5:13:76.92%:42:5.3843E-5:33:3:3:0:14 0/1:43:18:12:6:21:85.71%:84:3.7603E-9:32:3:3:0:22 0/1:40:30:17:13:38:78.95%:99:2.1946E-14:37:7:2:5:38 0/1:37:23:8:15:27:88.46%:99:7.3681E-12:30:3:3:0:28 0/1:38:14:3:11:19:70%:60:8.0605E-7:33:4:3:1:21 0/1:35:21:13:8:27:72.41%:90:8.7917E-10:34:7:6:1:30 0/1:39:17:8:9:21:80.95%:76:2.3502E-8:36:4:3:1:22 0/1:40:25:12:13:29:83.33%:99:2.745E-12:34:5:4:1:30 0/1:41:24:12:12:27:88.89%:99:2.0853E-12:37:3:2:1:30 0/1:40:32:16:16:38:80%:99:3.51E-15:33:8:6:2:40 1/1:37:36:13:23:35:94.74%:99:1.1316E-19:36:2:0:2:38 0/1:36:22:8:14:26:84.62%:99:5.5261E-11:42:4:2:2:26 1/1:38:23:12:11:24:92%:99:2.7767E-12:38:2:1:1:27 0/1:39:21:6:15:26:80.77%:94:3.4262E-10:37:5:2:3:28 0/1:35:19:6:13:23:79.17%:84:3.6826E-9:32:5:5:0:24 0/1:39:20:8:12:23:86.96%:95:3.1579E-10:36:3:0:3:23 0/1:40:19:5:14:27:70.37%:79:1.2089E-8:39:8:4:4:28 0/1:42:19:9:10:22:86.36%:89:1.0931E-9:35:3:3:0:22 0/1:39:21:11:10:26:80.77%:94:3.4262E-10:34:5:2:3:27 0/1:40:14:5:9:21:66.67%:56:2.1998E-6:43:7:5:2:21 1/1:37:33:13:20:32:97.06%:99:1.2301E-18:60:1:1:0:35 0/1:38:34:15:19:38:85%:99:8.7127E-17:36:6:2:4:40 1/1:40:36:17:19:36:97.3%:99:2.1762E-20:38:1:1:0:39 0/1:37:17:7:10:20:80.95%:76:2.3502E-8:36:4:2:2:22 0/1:35:24:5:19:27:85.71%:99:4.7015E-12:35:4:1:3:28 0/1:40:25:15:10:26:89.29%:99:5.8768E-13:37:3:2:1:29 1/1:37:19:8:11:20:95%:98:1.5234E-10:38:1:0:1:21 0/1:39:23:14:9:27:85.19%:99:1.6161E-11:32:4:2:2:28 1/1:40:23:12:11:24:95.83%:99:7.7525E-13:38:1:1:0:24 0/1:40:21:13:8:25:80.77%:94:3.4262E-10:36:5:4:1:26 0/1:39:25:8:17:28:89.29%:99:5.8768E-13:36:3:1:2:29 0/1:35:20:7:13:26:76.92%:87:1.8273E-9:36:6:3:3:26 0/1:36:16:4:12:20:80%:71:7.7086E-8:34:4:2:2:22 0/1:40:16:5:11:20:80%:71:7.7086E-8:36:4:1:3:21 1/1:40:20:9:11:19:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:27:15:12:29:90%:99:4.6134E-14:34:3:0:3:30 0/1:36:22:11:11:27:78.57%:97:1.7583E-10:33:6:2:4:28 0/1:41:35:18:17:40:87.5%:99:1.1364E-17:44:5:4:1:40 1/1:40:21:7:14:23:91.3%:99:3.6437E-11:31:2:2:0:27 0/1:43:17:11:6:18:89.47%:82:5.9414E-9:38:2:1:1:20 0/1:35:14:6:8:16:82.35%:63:4.8851E-7:31:3:1:2:17 1/1:40:34:15:19:37:91.89%:99:5.6582E-18:36:3:3:0:38 0/1:37:22:8:14:27:81.48%:99:1.0343E-10:36:5:3:2:29 1/1:36:31:14:17:31:93.94%:99:8.2416E-17:38:2:1:1:35 0/1:36:21:8:13:24:87.5%:99:9.0704E-11:37:3:1:2:25 0/1:37:34:12:22:40:82.93%:99:1.7333E-16:34:7:4:3:43 1/1:34:23:9:14:23:92%:99:2.7767E-12:33:2:0:2:25 0/1:40:43:19:24:53:81.13%:99:2.0375E-20:35:10:6:4:54 0/1:38:35:9:26:38:89.74%:99:4.5343E-18:34:4:3:1:41 1/1:39:23:12:11:25:92%:99:2.7767E-12:31:2:2:0:25 1/1:32:23:5:18:21:95.83%:99:7.7525E-13:32:1:0:1:25 0/1:38:32:12:20:39:80%:99:3.51E-15:36:8:2:6:40 0/1:36:30:9:21:33:83.33%:99:2.5943E-15:40:4:4:0:35 1/1:37:35:10:25:38:92.11%:99:1.5466E-18:35:3:2:1:39 0/1:37:29:10:19:37:76.32%:99:1.2345E-13:36:8:3:5:40 0/1:37:25:13:12:27:89.29%:99:5.8768E-13:33:3:2:1:29 0/1:37:23:10:13:30:76.67%:99:8.7055E-11:36:7:1:6:31 0/1:36:26:7:19:35:74.29%:99:6.3192E-12:36:9:7:2:37 0/1:34:17:4:13:19:89.47%:82:5.9414E-9:34:2:0:2:20 1/1:36:25:9:16:26:92.59%:99:2.0853E-13:34:2:2:0:27 0/1:37:20:2:18:24:83.33%:91:6.3493E-10:37:4:1:3:26 0/1:35:29:13:16:34:80.56%:99:4.008E-14:36:6:3:3:39 1/1:36:24:11:13:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:40:28:14:14:31:90.32%:99:1.2857E-14:31:3:1:2:31 0/1:34:25:8:17:31:75.76%:99:1.3235E-11:31:8:5:3:34 0/1:36:22:9:13:27:81.48%:99:1.0343E-10:33:5:2:3:28 0/1:36:21:6:15:30:70%:88:1.2841E-9:36:8:2:6:30 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 0/1:38:26:14:12:32:76.47%:99:4.1482E-12:33:8:5:3:34 1/1:39:19:9:10:20:95%:98:1.5234E-10:33:1:0:1:21 0/1:37:24:12:12:28:85.71%:99:4.7015E-12:36:4:2:2:28 1/1:35:21:14:7:21:91.3%:99:3.6437E-11:42:2:2:0:25 0/1:36:26:12:14:34:74.29%:99:6.3192E-12:36:9:3:6:36 0/1:37:8:0:8:12:66.67%:31:6.7304E-4:32:4:4:0:12 1/1:38:29:12:17:31:93.55%:99:1.1344E-15:31:2:2:0:34 1/1:37:38:19:19:40:90.48%:99:9.7197E-20:36:4:3:1:42 0/1:36:33:9:24:37:86.84%:99:5.7997E-17:35:4:1:3:38 0/1:35:19:6:13:22:79.17%:84:3.6826E-9:41:5:3:2:25 MTB_anc 3133054 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2825c_Rv2825c|gene2885|transcript|Transcript_gene2885|Coding|1/1|c.486C>G|p.Cys162Trp|486/648|486/648|162/215||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3133054G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3133054G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:34:16:18:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:10:17:28:96.43%:99:3.7915E-15:38:1:0:1:29 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:63:26:37:63:100%:99:1.657E-37:0:0:0:0:68 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:30:14:16:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:40:45:10:35:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:18:11:7:19:94.74%:99:1.1019E-10:0:0:0:0:20 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:11:16:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:23:13:10:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:25:10:15:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:35:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:39:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:49:20:29:49:100%:99:3.925E-29:0:0:0:0:52 1/1:37:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 MTB_anc 3133055 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2825c_Rv2825c|gene2885|transcript|Transcript_gene2885|Coding|1/1|c.485G>C|p.Cys162Ser|485/648|485/648|162/215||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3133055C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3133055C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:39:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:23:8:15:24:95.83%:99:1.2146E-13:0:0:0:0:26 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:28:15:13:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:65:26:39:65:100%:99:1.0519E-38:0:0:0:0:68 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:30:18:12:31:96.77%:99:8.4556E-18:0:0:0:0:32 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:36 1/1:40:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:43:8:35:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:39:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:35:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:31:13:18:32:96.88%:99:2.1486E-18:0:0:0:0:37 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:35:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:38:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:37:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:28 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:32 MTB_anc 3135896 . G A . PASS AC=296;AF=1.00;AN=296;ANN=A|synonymous_variant|LOW|Rv2828c_Rv2828c|gene2888|transcript|Transcript_gene2888|Coding|1/1|c.438C>T|p.Gly146Gly|438/546|438/546|146/181||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3135896G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3135896G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:29:20:9:30:96.67%:99:2.6212E-16:20:1:0:1:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:16:11:5:17:94.12%:87:1.6637E-9:0:0:0:0:19 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:37:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:35:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:35:25:14:11:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:20:12:8:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:34:20:14:35:97.14%:99:3.5146E-20:0:0:0:0:38 1/1:38:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:34:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:25:18:7:26:96.15%:99:5.4444E-14:27:1:0:1:27 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:37:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:35:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:24:16:8:25:96%:99:3.101E-14:0:0:0:0:25 1/1:41:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:24:14:10:24:100%:99:3.101E-14:0:0:0:0:28 1/1:34:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:36:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:23:10:13:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:34:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:38:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:9:7:2:10:90%:46:2.0568E-5:0:0:0:0:11 1/1:36:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:27:13:14:28:96.43%:99:5.1363E-16:0:0:0:0:31 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:26:17:9:27:96.3%:99:2.0165E-15:0:0:0:0:32 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:37:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:17 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:20:18:2:21:95.24%:99:7.2544E-12:0:0:0:0:22 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:20:14:6:21:95.24%:99:7.2544E-12:0:0:0:0:23 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:19:13:6:20:95%:98:1.5234E-10:37:1:0:1:20 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:38:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 MTB_anc 3135912 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv2828c_Rv2828c|gene2888|transcript|Transcript_gene2888|Coding|1/1|c.422C>G|p.Thr141Arg|422/546|422/546|141/181||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3135912G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3135912G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:33:14:19:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:12:12:26:92.31%:99:3.101E-14:0:0:0:0:26 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:49:15:34:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 3136335 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2828A_Rv2828A|gene2889|transcript|Transcript_gene2889|Coding|1/1|c.265C>T|p.Arg89Trp|265/270|265/270|89/89||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.3136335G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3136335G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:50:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:43:49:33:16:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:45:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:12:10:23:95.65%:99:2.9149E-12:37:1:0:1:23 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 3137237 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|vapB22_Rv2830c-echA16_Rv2831|gene2891-gene2892|intergenic_region|gene2891-gene2892|||n.3137237C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:51:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:68:40:28:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:68:38:30:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:59:36:23:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:64:35:29:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 MTB_anc 3137638 . C G . PASS AC=16;AF=0.053;AN=300;ANN=G|missense_variant|MODERATE|echA16_Rv2831|gene2892|transcript|Transcript_gene2892|Coding|1/1|c.368C>G|p.Thr123Ser|368/750|368/750|123/249||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3137638C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3137638C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:18:32:52 0/0:0:0:0:0:11:0%:22:1E0:47:11:6:5:11 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:0:0:0:0:15:0%:29:1E0:49:15:8:7:15 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:25 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:24 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:8:19:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:18 0/0:0:0:0:0:21:0%:40:1E0:51:21:13:8:21 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:14:0%:25:1E0:52:14:8:6:14 0/0:0:0:0:0:54:0%:99:1E0:42:54:26:28:55 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:14 0/0:0:0:0:0:16:0%:29:1E0:50:16:10:6:17 0/0:0:0:0:0:18:0%:32:1E0:49:18:8:10:18 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:47:0%:89:1E0:41:47:30:17:47 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:43 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:19:0%:37:1E0:46:19:13:6:19 0/0:0:0:0:0:10:0%:17:1E0:47:10:6:4:10 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 0/0:0:0:0:0:28:0%:51:1E0:50:28:14:14:28 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:66:0%:99:1E0:46:66:39:27:69 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:19:0%:37:1E0:42:19:6:13:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:53:0%:99:1E0:39:53:24:29:54 0/0:0:0:0:0:41:0%:78:1E0:42:41:29:12:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:44 0/0:0:0:0:0:18:0%:32:1E0:49:18:12:6:19 0/0:0:0:0:0:48:0%:89:1E0:39:48:21:27:49 0/0:0:0:0:0:14:0%:25:1E0:53:14:6:8:14 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 0/0:0:0:0:0:49:0%:93:1E0:39:49:18:31:49 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:39 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:20 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:39 0/0:0:0:0:0:53:0%:99:1E0:45:53:23:30:53 0/0:0:0:0:0:21:0%:40:1E0:46:21:15:6:22 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 0/0:0:0:0:0:15:0%:29:1E0:42:15:11:4:15 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:23 0/0:0:0:0:0:14:0%:25:1E0:42:14:5:9:14 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:48:0%:89:1E0:40:48:20:28:52 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:38 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:47 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:10:0%:17:1E0:46:10:6:4:10 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:22 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:52 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:44:0%:81:1E0:40:44:18:26:45 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:29 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:18:0%:32:1E0:40:18:12:6:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:20:0%:36:1E0:42:20:5:15:20 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:20 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:22:9:13:24:91.67%:99:2.9149E-12:38:1:1:0:24 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:33 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:38 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:17:9:26 0/0:0:0:0:0:52:0%:96:1E0:43:52:24:28:53 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:41 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:37 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:24 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:38 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:35 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:42 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:41 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:32 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:40 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:29 0/0:0:0:0:0:50:0%:92:1E0:38:50:23:27:50 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:38 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:41 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:48:0%:89:1E0:39:48:18:30:49 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:37:31:9:22:33 MTB_anc 3140512 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|ugpE_Rv2834c|gene2895|transcript|Transcript_gene2895|Coding|1/1|c.803T>C|p.Leu268Pro|803/828|803/828|268/275||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3140512A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3140512A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:51:25:26:53:100%:99:2.5024E-30:0:0:0:0:53 1/1:46:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:13:19:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:27:11:16:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:64:32:32:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:60:35:25:60:100%:99:1.035E-35:0:0:0:0:60 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:29:14:15:30:96.67%:99:2.6212E-16:60:1:1:0:31 1/1:43:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:61:36:25:61:100%:99:2.609E-36:0:0:0:0:62 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:20:17:38:97.37%:99:5.6582E-21:39:1:1:0:39 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:41:19:22:42:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:41:10:31:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:36:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:37:30:14:16:31:96.77%:99:6.8754E-17:37:1:1:0:31 MTB_anc 3147742 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|infB_Rv2839c|gene2900|transcript|Transcript_gene2900|Coding|1/1|c.132T>C|p.Val44Val|132/2703|132/2703|44/900||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3147742A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3147742A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:53:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:17:5:12:18:94.44%:93:4.2852E-10:0:0:0:0:19 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:40:10:30:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:37:6:31:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:39:9:30:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:52:14:38:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:35:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:45:10:35:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:37:8:29:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 3154627 . G A . PASS AC=72;AF=0.240;AN=300;ANN=A|missense_variant|MODERATE|efpA_Rv2846c|gene2907|transcript|Transcript_gene2907|Coding|1/1|c.5C>T|p.Thr2Met|5/1593|5/1593|2/530||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3154627G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3154627G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:40 0/0:0:0:0:0:12:0%:21:1E0:45:12:3:9:12 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:36 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 0/0:0:0:0:0:40:0%:74:1E0:46:40:15:25:41 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 1/1:44:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:35:0%:67:1E0:38:35:11:24:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:20 0/0:0:0:0:0:40:0%:74:1E0:37:40:11:29:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:20 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:47 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:27 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:48 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:38:35:14:21:35 0/0:0:0:0:0:45:0%:85:1E0:44:45:28:17:45 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:45 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:34 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:12:6:18 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:21 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:21 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:28 0/0:33:1:0:1:39:2.56%:62:5E-1:42:38:13:25:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:39 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:35 0/0:0:0:0:0:39:0%:74:1E0:38:39:16:23:41 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:46:19:27:47:97.87%:99:2.9526E-26:39:1:0:1:48 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:19 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:16 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:26 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:38:0%:70:1E0:38:38:18:20:39 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:26:0%:47:1E0:42:26:8:18:26 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:29 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:34 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:29 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:29 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:26 0/0:0:0:0:0:58:0%:99:1E0:42:58:31:27:59 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:47 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:37:28:15:13:28 1/1:37:50:20:30:51:98.04%:99:1.3013E-28:38:1:0:1:51 0/0:0:0:0:0:34:0%:62:1E0:37:34:16:18:35 0/0:0:0:0:0:47:0%:89:1E0:38:47:20:27:49 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 0/0:0:0:0:0:39:0%:74:1E0:38:39:16:23:40 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:39 0/0:0:0:0:0:31:0%:59:1E0:36:31:13:18:31 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:36 1/1:38:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:47 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:39 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:40 1/1:39:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:39:1:1:0:31:3.23%:48:5E-1:41:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:36 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:26 1/1:41:32:16:16:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:51:0%:97:1E0:37:51:18:33:52 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:27 MTB_anc 3159998 . CAA C . PASS AC=298;AF=0.993;AN=300;ANN=C|frameshift_variant|HIGH|Rv2850c_Rv2850c|gene2911|transcript|Transcript_gene2911|Coding|1/1|c.55_56delTT|p.Leu19fs|56/1890|55/1890|19/629||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3159999_3160000delAA||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3159999_3160000delAA||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:20:7:13:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:38:19:19:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:19:8:11:20:95%:98:1.5234E-10:32:1:0:1:20 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:41:22:19:43:95.35%:99:1.4915E-22:47:2:0:2:43 1/1:44:22:10:12:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:18:23:40:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:48:12:8:4:13:92.31%:58:1.3461E-6:33:1:0:1:13 1/1:46:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:20:10:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:46:17:29:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:16:18:35:97.14%:99:3.2089E-19:35:1:0:1:35 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:32:15:17:33:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:45:24:8:16:23:100%:99:3.101E-14:0:0:0:0:24 1/1:48:17:6:11:17:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:43:15:28:44:95.56%:99:1.0412E-23:33:2:0:2:45 1/1:40:37:17:20:39:94.87%:99:3.0128E-20:34:2:0:2:39 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:11:15:28:92.86%:99:5.6872E-14:32:2:1:1:28 1/1:44:22:7:15:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:29:12:17:30:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:43:39:25:14:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:38:23:15:39:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:49:64:29:35:66:96.97%:99:6.0362E-36:33:2:1:1:66 1/1:44:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:28:14:14:29:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:13:15:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:11:21:32:96.97%:99:4.7095E-18:33:1:1:0:33 1/1:44:29:15:14:31:93.55%:99:1.1344E-15:48:2:2:0:31 1/1:44:53:26:27:55:96.36%:99:1.6199E-29:34:2:0:2:55 1/1:43:26:17:9:26:96.3%:99:1.4382E-14:54:1:1:0:27 1/1:43:33:17:16:35:91.67%:99:2.0653E-17:42:3:3:0:36 1/1:41:44:18:26:48:91.67%:99:4.207E-23:42:4:3:1:48 1/1:45:41:21:20:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:25:14:11:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:59:28:31:60:96.72%:99:5.0953E-33:32:2:0:2:61 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:13:18:33:93.94%:99:8.2416E-17:35:2:1:1:33 1/1:44:62:30:32:62:96.88%:99:8.9557E-35:34:2:1:1:64 1/1:41:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:9:18:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:40:19:21:42:95.24%:99:5.6346E-22:32:2:1:1:42 1/1:43:33:18:15:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:42:38:12:26:39:97.44%:99:1.4697E-21:32:1:0:1:39 1/1:42:41:20:21:41:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:45:39:24:15:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:53:29:24:56:94.64%:99:8.323E-29:42:3:3:0:56 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:48:26:22:48:97.96%:99:1.9625E-27:33:1:0:1:49 1/1:44:27:16:11:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:37:21:16:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:35:15:20:37:94.59%:99:4.2437E-19:33:2:0:2:37 1/1:42:33:18:15:34:97.06%:99:1.2301E-18:39:1:0:1:34 1/1:41:28:12:16:29:96.55%:99:9.9776E-16:30:1:0:1:29 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:19:15:35:97.14%:99:3.2089E-19:32:1:0:1:35 1/1:44:22:9:13:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:42:30:16:14:31:96.77%:99:6.8754E-17:36:1:1:0:31 1/1:40:45:15:30:47:95.74%:99:7.2338E-25:35:2:2:0:47 1/1:43:30:15:15:30:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:46:30:12:18:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:43:36:13:23:37:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:42:39:20:19:40:97.5%:99:3.8137E-22:60:1:0:1:40 1/1:42:39:21:18:39:95.12%:99:2.1258E-21:48:2:1:1:41 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:41:22:19:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:19:9:10:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:44:30:16:14:31:96.77%:99:6.8754E-17:33:1:1:0:31 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:49:20:29:51:96.08%:99:3.4484E-27:33:2:0:2:51 0/1:46:21:7:14:24:87.5%:99:9.0704E-11:34:3:1:2:24 1/1:42:57:25:32:57:98.28%:99:9.6072E-33:33:1:1:0:58 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:25:10:15:27:92.59%:99:2.0853E-13:37:2:2:0:27 1/1:43:35:16:19:36:97.22%:99:8.3613E-20:33:1:0:1:36 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:47:17:30:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:40:18:22:41:97.56%:99:9.8874E-23:58:1:0:1:41 1/1:37:38:18:20:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:18:8:10:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:14:18:33:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:17:21:38:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:47:28:15:13:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:45:19:26:46:97.83%:99:1.1441E-25:32:1:0:1:46 1/1:38:42:18:24:40:97.67%:99:6.6289E-24:34:1:0:1:43 1/1:39:30:16:14:30:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:18:13:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:54:24:30:55:98.18%:99:5.6837E-31:35:1:0:1:55 1/1:40:47:17:30:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:31:14:17:34:91.18%:99:2.7308E-16:34:3:1:2:34 1/1:41:29:14:15:30:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:40:47:19:28:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:36:17:19:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:46:24:22:46:97.87%:99:2.9526E-26:34:1:0:1:47 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:39:22:17:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:39:19:20:40:97.5%:99:3.8137E-22:33:1:0:1:40 1/1:39:35:14:21:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:32:12:20:35:91.43%:99:7.5196E-17:32:3:0:3:35 1/1:38:38:20:18:37:97.44%:99:1.4697E-21:32:1:0:1:39 1/1:42:32:15:17:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:22:14:38:94.74%:99:1.1316E-19:48:2:1:1:38 1/1:40:64:31:33:65:98.46%:99:6.9424E-37:60:1:0:1:65 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:39:18:21:41:95.12%:99:2.1258E-21:34:2:0:2:41 1/1:40:53:24:29:53:96.36%:99:1.6199E-29:36:2:1:1:55 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:21:18:40:97.5%:99:3.8137E-22:34:1:1:0:40 0/1:42:33:14:19:37:89.19%:99:5.7997E-17:34:4:3:1:37 1/1:42:54:22:32:54:96.43%:99:4.2321E-30:36:2:2:0:56 1/1:41:43:21:22:44:97.73%:99:1.7144E-24:32:1:0:1:44 MTB_anc 3160386 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv2851c_Rv2851c|gene2912|transcript|Transcript_gene2912|Coding|1/1|c.136C>T|p.Leu46Phe|136/471|136/471|46/156||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3160386G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3160386G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:50:24:16:8:25 0/0:39:1:0:1:57:1.75%:95:5E-1:47:56:32:24:57 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:33:0%:63:1E0:51:33:13:20:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:20:0%:36:1E0:53:20:10:10:22 0/0:0:0:0:0:43:0%:82:1E0:49:43:28:15:44 0/0:0:0:0:0:41:0%:78:1E0:48:41:25:16:41 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:50 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:31 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:25 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:45 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:49:0%:93:1E0:47:49:24:25:50 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:19 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:24 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:7:23:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:37:0%:70:1E0:49:37:19:18:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:59:0%:99:1E0:50:59:25:34:59 0/0:0:0:0:0:52:0%:96:1E0:46:52:26:26:52 0/0:0:0:0:0:36:0%:66:1E0:47:36:22:14:38 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:12:0%:21:1E0:46:12:5:7:14 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:29:1:0:1:47:2.13%:77:5E-1:43:46:26:20:47 0/0:0:0:0:0:25:0%:48:1E0:46:25:8:17:26 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:37 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:23 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:18:0%:32:1E0:50:18:10:8:18 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:45 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:10:22:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:47 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:50 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:35 0/0:0:0:0:0:59:0%:99:1E0:47:59:32:27:60 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:24 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:31 0/0:0:0:0:0:18:0%:32:1E0:48:18:7:11:18 0/0:0:0:0:0:20:0%:36:1E0:47:20:14:6:20 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:31 0/0:0:0:0:0:25:0%:48:1E0:48:25:9:16:26 0/0:0:0:0:0:22:0%:40:1E0:48:22:16:6:22 0/0:39:1:1:0:41:2.44%:66:5E-1:50:40:17:23:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:41:0%:78:1E0:51:41:24:17:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:38 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:62:0%:99:1E0:41:62:29:33:62 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:53 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:13:27:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:28:17:46 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:44:0%:81:1E0:46:44:15:29:45 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:7:18:26 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:46 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:33 0/0:0:0:0:0:39:0%:74:1E0:47:39:10:29:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:16:29:46 0/0:0:0:0:0:56:0%:99:1E0:44:56:22:34:58 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:53 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:51 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:54:0%:99:1E0:39:54:32:22:56 0/0:0:0:0:0:49:0%:93:1E0:41:49:19:30:50 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:49 0/0:0:0:0:0:58:0%:99:1E0:40:58:28:30:60 0/0:0:0:0:0:39:0%:74:1E0:42:39:11:28:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:39 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:24 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:40 0/0:0:0:0:0:43:0%:82:1E0:42:43:16:27:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:37 0/0:0:0:0:0:54:0%:99:1E0:41:54:20:34:54 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:32 0/0:0:0:0:0:51:0%:97:1E0:39:51:17:34:52 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:37 0/0:0:0:0:0:55:0%:99:1E0:40:55:25:30:56 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:23 0/0:0:0:0:0:43:0%:82:1E0:46:43:27:16:44 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:54 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:48:0%:89:1E0:46:48:27:21:48 0/0:0:0:0:0:56:0%:99:1E0:44:56:26:30:56 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:39 MTB_anc 3162804 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PE_PGRS48_Rv2853|gene2914|transcript|Transcript_gene2914|Coding|1/1|c.537C>A|p.Asn179Lys|537/1848|537/1848|179/615||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3162804C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3162804C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:33:6:27:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:30:7:23:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:28:4:24:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:41:7:34:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:36:6:30:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:39:9:30:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:33:5:28:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:39:8:31:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:21:1:20:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:33:6:27:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:28:8:20:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:31:6:25:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:44:7:37:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 MTB_anc 3166248 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|mtr_Rv2855|gene2916|transcript|Transcript_gene2916|Coding|1/1|c.1044G>T|p.Ala348Ala|1044/1380|1044/1380|348/459||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3166248G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3166248G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:60:1:1:0:42:2.38%:66:5E-1:45:41:18:23:43 0/0:0:0:0:0:21:0%:40:1E0:48:21:14:7:23 0/0:0:0:0:0:44:0%:81:1E0:47:44:20:24:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:29:0%:55:1E0:48:29:8:21:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:36:0%:66:1E0:50:36:17:19:36 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:24 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:35 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:37:0%:70:1E0:49:37:12:25:38 0/0:0:0:0:0:46:0%:85:1E0:45:46:26:20:49 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:17 0/0:0:0:0:0:44:0%:81:1E0:47:44:22:22:44 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:32 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:25 0/0:0:0:0:0:14:0%:25:1E0:46:14:5:9:14 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:8:17:25 0/0:0:0:0:0:44:0%:81:1E0:47:44:20:24:44 0/0:0:0:0:0:23:0%:44:1E0:50:23:12:11:23 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:26 0/0:0:0:0:0:27:0%:52:1E0:52:27:11:16:27 0/0:0:0:0:0:20:0%:36:1E0:48:20:13:7:20 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:17 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:21 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:51 0/0:0:0:0:0:39:0%:74:1E0:46:39:26:13:42 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:34 0/0:37:1:1:0:22:4.55%:31:5E-1:45:21:11:10:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:17 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:14:26:42 0/0:0:0:0:0:33:0%:63:1E0:49:33:13:20:33 0/0:0:0:0:0:18:0%:32:1E0:52:18:12:6:18 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:23:0%:44:1E0:48:23:7:16:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:36:1:1:0:18:5.56%:24:5E-1:46:17:6:11:19 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:46 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:47:40:16:24:40 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:32 0/0:20:1:0:1:26:3.85%:38:5E-1:45:25:10:15:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:24 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:63:0%:99:1E0:44:63:34:29:64 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:20 0/0:0:0:0:0:12:0%:21:1E0:53:12:7:5:12 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 1/1:49:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:16:0%:29:1E0:51:16:9:7:16 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:32 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:15:27:43 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:21:0%:40:1E0:50:21:6:15:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:21:0%:40:1E0:48:21:7:14:21 0/0:0:0:0:0:44:0%:81:1E0:47:44:22:22:44 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:57:0%:99:1E0:42:57:24:33:58 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:21:0%:40:1E0:48:21:8:13:21 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:24:10:37 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:47 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:26 0/0:0:0:0:0:50:0%:92:1E0:45:50:33:17:51 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:43 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:48 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:33 0/0:0:0:0:0:52:0%:96:1E0:41:52:20:32:53 0/0:0:0:0:0:71:0%:99:1E0:40:71:35:36:71 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:49 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/0:0:0:0:0:50:0%:92:1E0:41:50:21:29:50 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:26 0/0:0:0:0:0:52:0%:96:1E0:41:52:33:19:56 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:49 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:40 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:44 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:48:0%:89:1E0:39:48:17:31:48 0/0:0:0:0:0:50:0%:92:1E0:46:50:28:22:51 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:46 0/0:0:0:0:0:49:0%:93:1E0:42:49:30:19:50 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:52:0%:96:1E0:46:52:32:20:52 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:31:20:52 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 MTB_anc 3169012 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv2857c_Rv2857c|gene2918|transcript|Transcript_gene2918|Coding|1/1|c.348G>A|p.Leu116Leu|348/777|348/777|116/258||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3169012C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3169012C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:49:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:54:24:30:55:100%:99:4.0229E-32:0:0:0:0:55 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:49:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:19:18:38:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:49:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:35:18:17:36:97.22%:99:8.3613E-20:60:1:1:0:37 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:61:31:30:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:31:18:13:32:96.88%:99:1.8007E-17:38:1:1:0:34 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:35:21:14:36:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:61:38:23:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 MTB_anc 3174496 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2862c_Rv2862c|gene2923|transcript|Transcript_gene2923|Coding|1/1|c.148C>T|p.Arg50Cys|148/585|148/585|50/194||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3174496G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3174496G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:52:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:51:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:51:24:27:52:98.08%:99:2.5024E-30:0:0:0:0:53 1/1:45:27:14:13:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:55:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:47:17:30:48:100%:99:6.1512E-28:0:0:0:0:50 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:24:10:14:25:100%:99:3.101E-14:0:0:0:0:25 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:53:18:35:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:59:23:36:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:49:21:28:49:100%:99:3.925E-29:0:0:0:0:52 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 3180532 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|intergenic_region|MODIFIER|gcpE_Rv2868c-rip_Rv2869c|gene2930-gene2931|intergenic_region|gene2930-gene2931|||n.3180532T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:44:59:30:29:61 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:54:0%:99:1E0:47:54:27:27:55 0/0:0:0:0:0:35:0%:67:1E0:48:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:41:0%:78:1E0:49:41:17:24:42 0/0:0:0:0:0:33:0%:63:1E0:51:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:30 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:53 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:27 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:52 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:39 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:44:0%:81:1E0:49:44:15:29:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:52 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:47 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:23 0/0:0:0:0:0:18:0%:32:1E0:45:18:6:12:18 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:28:0%:51:1E0:47:28:18:10:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:28 0/0:0:0:0:0:33:0%:63:1E0:50:33:17:16:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:61:0%:99:1E0:49:61:32:29:61 0/0:0:0:0:0:54:0%:99:1E0:45:54:26:28:54 0/0:0:0:0:0:43:0%:82:1E0:47:43:18:25:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:55:0%:99:1E0:44:55:30:25:55 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:46 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:24:0%:44:1E0:50:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:43 0/0:38:1:1:0:28:3.57%:41:5E-1:47:27:12:15:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:38:1:0:1:38:2.63%:58:5E-1:45:37:19:18:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:23:13:37 1/1:48:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:43:0%:82:1E0:46:43:24:19:45 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:30:0%:55:1E0:52:30:12:18:31 0/0:0:0:0:0:20:0%:36:1E0:52:20:6:14:20 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:37 0/0:0:0:0:0:23:0%:44:1E0:49:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:47 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:45 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:35 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:24 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:38 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:23:0%:44:1E0:48:23:7:16:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:34 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:25 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:51:0%:97:1E0:40:51:23:28:51 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:41:0%:78:1E0:48:41:21:20:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:29 0/0:0:0:0:0:57:0%:99:1E0:42:57:22:35:58 0/0:0:0:0:0:69:0%:99:1E0:44:69:33:36:70 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:22 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:48 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:44 0/0:0:0:0:0:51:0%:97:1E0:41:51:20:31:53 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:46:0%:85:1E0:44:46:29:17:49 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:45:0%:85:1E0:41:45:14:31:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:43:0%:82:1E0:42:43:31:12:43 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:44 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:42 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:57:0%:99:1E0:40:57:26:31:58 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:50 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:8:19:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:46:0%:85:1E0:48:46:25:21:47 0/0:0:0:0:0:65:0%:99:1E0:42:65:31:34:65 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 MTB_anc 3180988 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|rip_Rv2869c|gene2931|transcript|Transcript_gene2931|Coding|1/1|c.775T>G|p.Phe259Val|775/1215|775/1215|259/404||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3180988A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3180988A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:55:33:22:56:98.21%:99:1.0149E-32:0:0:0:0:56 1/1:44:20:8:12:21:95.24%:99:4.0873E-11:60:1:0:1:21 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:22:7:15:24:91.67%:99:1.0078E-11:49:2:1:1:25 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:49:29:20:49:100%:99:3.925E-29:0:0:0:0:52 1/1:44:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:54:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:36:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:65:28:37:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:22:25:48:100%:99:6.1512E-28:0:0:0:0:50 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:43:20:23:44:100%:99:1.5066E-25:0:0:0:0:45 MTB_anc 3185969 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|dipZ_Rv2874|gene2936|transcript|Transcript_gene2936|Coding|1/1|c.1123G>A|p.Gly375Ser|1123/2088|1123/2088|375/695||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3185969G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3185969G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:60:28:32:60:100%:99:1.035E-35:0:0:0:0:60 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:49:25:24:50:98%:99:5.0549E-28:60:1:1:0:50 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:61:30:31:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:29:18:11:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:51:13:38:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:44:16:28:45:97.78%:99:4.4304E-25:33:1:0:1:45 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:34:16:18:35:97.14%:99:3.2089E-19:38:1:0:1:35 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 3187090 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|mpt70_Rv2875|gene2937|transcript|Transcript_gene2937|Coding|1/1|c.61G>A|p.Ala21Thr|61/582|61/582|21/193||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3187090G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3187090G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:49:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:34 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:38:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:51 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:68 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:31:13:18:32:96.88%:99:1.8007E-17:60:1:0:1:33 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:15:13:29:96.55%:99:9.9776E-16:39:1:1:0:29 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:39:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:38:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:29 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:40:71:27:44:71:100%:99:2.6835E-42:0:0:0:0:72 1/1:40:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:35:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:50 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:38:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:41 1/1:41:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:38:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:45:24:21:46:97.83%:99:1.1441E-25:39:1:1:0:48 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 3188769 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|merT_Rv2877c|gene2939|transcript|Transcript_gene2939|Coding|1/1|c.103C>T|p.His35Tyr|103/864|103/864|35/287||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3188769G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3188769G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:49:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:51:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:53:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:50:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:61:21:40:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:44:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:51 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:38:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:61:26:35:61:100%:99:2.609E-36:0:0:0:0:63 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 3189242 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|mpt53_Rv2878c|gene2940|transcript|Transcript_gene2940|Coding|1/1|c.156C>T|p.Ala52Ala|156/522|156/522|52/173||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3189242G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3189242G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:53:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:49:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:54:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:25:11:14:26:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:54:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:52:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:61:25:36:61:100%:99:2.609E-36:0:0:0:0:63 1/1:47:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:55:35:20:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:27:11:16:28:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:50:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:49:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:62:26:36:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:37:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 3189580 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|mpt53_Rv2878c-cdsA_Rv2881c|gene2940-gene2941|intergenic_region|gene2940-gene2941|||n.3189580C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:27:16:11:28:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:45:18:27:46:97.83%:99:1.1441E-25:38:1:0:1:48 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:60:24:36:60:100%:99:1.035E-35:0:0:0:0:62 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:36:19:17:37:97.3%:99:2.1762E-20:37:1:0:1:38 1/1:43:30:16:14:31:96.77%:99:6.8754E-17:36:1:0:1:34 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:55:33:22:56:98.21%:99:1.4593E-31:36:1:0:1:59 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:17:8:9:18:94.44%:93:4.2852E-10:0:0:0:0:19 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:15:21:37:97.3%:99:2.1762E-20:38:1:0:1:38 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:43:20:23:44:97.73%:99:1.7144E-24:34:1:0:1:45 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:52:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:20:8:12:21:95.24%:99:4.0873E-11:35:1:0:1:21 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:23:12:11:24:95.83%:99:7.7525E-13:37:1:1:0:25 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:37:20:17:38:97.37%:99:5.6582E-21:37:1:0:1:38 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:38:25:15:10:26:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:42:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:31:18:13:32:96.88%:99:1.8007E-17:30:1:0:1:34 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:49:25:24:50:98%:99:5.0549E-28:34:1:0:1:51 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:52 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:42:62:25:37:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:44:22:22:45:97.78%:99:4.4304E-25:37:1:1:0:49 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:57 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:32:16:16:33:96.97%:99:4.7095E-18:37:1:1:0:36 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:29:14:15:30:100%:99:3.3259E-17:0:0:0:0:32 1/1:36:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:50:26:24:51:98.04%:99:1.3013E-28:37:1:1:0:52 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:40:20:20:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 MTB_anc 3190145 . TC T . PASS AC=291;AF=0.970;AN=300;ANN=T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3190146delC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3190146delC||||||,T|intergenic_region|MODIFIER|mpt53_Rv2878c-cdsA_Rv2881c|gene2940-gene2941|intergenic_region|gene2940-gene2941|||n.3190146delC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:53:33:20:50:98.15%:99:2.2126E-30:34:1:1:0:54 1/1:49:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:24:16:8:24:96%:99:2.0568E-13:33:1:0:1:25 1/1:43:21:10:11:21:95.45%:99:1.0931E-11:32:1:1:0:23 1/1:44:29:15:14:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:27:16:11:30:90%:99:4.6134E-14:51:3:1:2:30 1/1:41:31:17:14:28:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:35:22:13:34:97.22%:99:8.3613E-20:35:1:1:0:36 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:16:17:34:94.29%:99:5.9366E-18:32:2:0:2:35 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:49:22:27:48:96.08%:99:3.4484E-27:31:2:0:2:51 1/1:40:30:11:19:30:96.77%:99:6.8754E-17:32:1:0:1:31 0/1:47:31:15:16:35:88.57%:99:2.7308E-16:32:3:3:0:35 1/1:40:25:13:12:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:19:7:12:20:95%:98:1.5234E-10:33:1:0:1:21 1/1:46:32:18:14:31:100%:99:5.4567E-19:0:0:0:0:32 0/1:44:25:12:13:28:89.29%:99:5.8768E-13:33:3:2:1:28 1/1:41:31:21:10:32:96.88%:99:1.8007E-17:37:1:1:0:32 1/1:41:54:31:23:56:93.1%:99:9.0836E-29:39:4:3:1:58 1/1:44:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:20:18:41:92.68%:99:3.1178E-20:34:3:2:1:41 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 0/1:46:19:9:10:23:82.61%:86:2.1316E-9:47:4:3:1:23 1/1:45:25:9:16:26:92.59%:99:2.0853E-13:34:2:1:1:27 1/1:43:27:17:10:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:44:26:18:45:97.78%:99:4.4304E-25:34:1:0:1:45 1/1:43:43:27:16:44:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:42:43:19:24:43:97.73%:99:1.7144E-24:25:1:1:0:44 1/1:49:39:21:18:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:46:19:10:9:20:95%:98:1.5234E-10:33:1:1:0:20 1/1:47:32:21:11:32:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:44:45:26:19:45:97.83%:99:1.1441E-25:35:1:0:1:46 1/1:43:32:17:15:31:96.97%:99:4.7095E-18:60:1:0:1:33 1/1:48:63:39:24:65:96.92%:99:2.3257E-35:33:2:0:2:65 1/1:49:42:23:19:43:95.45%:99:3.9431E-23:35:2:1:1:44 1/1:40:38:29:9:34:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:25:16:9:23:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:45:35:19:16:35:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:39:29:15:14:29:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:41:39:23:16:38:95.12%:99:2.1258E-21:33:2:1:1:41 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:28:11:17:29:93.33%:99:4.194E-15:34:2:1:1:30 1/1:43:36:18:18:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:45:23:22:44:100%:99:9.6314E-27:0:0:0:0:45 0/1:42:15:7:8:19:78.95%:66:2.5053E-7:41:4:1:3:19 1/1:42:36:23:13:38:94.74%:99:1.1316E-19:37:2:2:0:38 1/1:46:20:7:13:20:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:45:14:6:8:15:93.33%:69:1.0315E-7:35:1:0:1:15 1/1:40:28:20:8:27:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:40:42:25:17:43:97.67%:99:6.6289E-24:33:1:0:1:43 0/1:43:34:19:15:38:87.18%:99:3.9902E-17:43:5:2:3:40 1/1:44:18:11:7:19:94.74%:92:5.6585E-10:34:1:1:0:19 1/1:43:43:21:22:45:91.49%:99:1.5372E-22:40:4:2:2:48 1/1:44:34:16:18:35:94.44%:99:1.5887E-18:33:2:2:0:36 1/1:44:26:12:14:26:92.86%:99:5.6872E-14:33:2:0:2:28 1/1:47:35:18:17:37:94.59%:99:4.2437E-19:44:2:2:0:37 1/1:39:40:21:19:42:95.24%:99:5.6346E-22:34:2:2:0:42 1/1:40:25:14:11:26:92.59%:99:2.0853E-13:48:2:2:0:27 1/1:42:40:21:19:41:95.24%:99:5.6346E-22:46:2:2:0:42 1/1:46:54:28:26:55:98.18%:99:5.6837E-31:33:1:1:0:55 1/1:40:29:19:10:30:93.55%:99:1.1344E-15:33:2:1:1:31 1/1:45:39:21:18:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:49:27:12:15:27:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:49:20:11:9:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:46:37:18:19:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:49:24:12:12:23:100%:99:3.101E-14:0:0:0:0:25 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:21:8:29:93.55%:99:1.1344E-15:47:2:2:0:31 1/1:42:41:24:17:41:97.62%:99:2.5612E-23:32:1:0:1:42 1/1:48:22:11:11:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:44:26:18:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:30:16:14:31:90.91%:99:3.0612E-16:35:2:1:1:33 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:27:13:14:27:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:42:44:23:21:44:97.78%:99:4.4304E-25:32:1:0:1:45 1/1:42:40:20:20:42:95.24%:99:5.6346E-22:33:2:2:0:42 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:12:18:33:90.91%:99:9.89E-16:33:3:3:0:33 0/1:42:29:15:14:33:87.88%:99:9.1482E-15:33:4:1:3:33 0/1:40:29:17:12:34:85.29%:99:2.0235E-14:33:5:3:2:34 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:16:16:35:91.43%:99:7.5196E-17:41:3:2:1:36 1/1:48:30:18:12:31:93.75%:99:3.0612E-16:33:2:2:0:32 1/1:46:35:22:13:36:97.22%:99:8.3613E-20:31:1:0:1:36 1/1:47:29:12:17:29:96.67%:99:2.6212E-16:33:1:1:0:30 1/1:36:45:22:23:40:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:22:6:16:23:95.65%:99:2.9149E-12:35:1:0:1:23 1/1:42:52:29:23:52:96.3%:99:8.609E-30:32:1:1:0:54 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:21:11:10:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:24:13:11:23:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:16:13:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:25:12:13:21:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:20:10:10:20:95.24%:99:4.0873E-11:34:1:1:0:21 1/1:41:48:22:26:49:97.96%:99:1.9625E-27:34:1:0:1:49 1/1:38:29:15:14:28:93.55%:99:1.1344E-15:31:2:0:2:31 1/1:39:30:12:18:28:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:8:14:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:24:14:10:25:92.31%:99:7.6222E-13:35:2:1:1:26 1/1:44:40:21:19:38:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:15:17:33:96.97%:99:4.7095E-18:60:1:1:0:33 1/1:41:30:23:7:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:39:36:21:15:35:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:31:16:15:31:96.88%:99:1.8007E-17:31:1:0:1:32 1/1:38:27:16:11:27:96.43%:99:3.7915E-15:35:1:0:1:28 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:32:21:11:31:96.97%:99:4.7095E-18:33:1:0:1:34 0/1:42:34:17:17:37:89.47%:99:1.6239E-17:32:4:3:1:38 1/1:36:29:12:17:28:100%:99:3.3259E-17:0:0:0:0:29 0/1:42:31:17:14:34:88.57%:99:7.3316E-16:29:4:2:2:35 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:58:32:26:57:98.31%:99:2.4634E-33:35:1:0:1:59 1/1:44:25:16:9:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:39:22:10:12:19:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:49:29:20:50:96.08%:99:3.4484E-27:32:2:2:0:51 1/1:39:41:21:20:38:97.62%:99:2.5612E-23:31:1:1:0:43 1/1:38:47:26:21:47:95.92%:99:5.0044E-26:35:2:1:1:49 1/1:36:32:18:14:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:39:17:22:38:95.12%:99:2.1258E-21:32:2:0:2:42 1/1:41:33:16:17:32:94.29%:99:5.9366E-18:34:2:2:0:35 1/1:42:28:18:10:27:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:40:24:16:38:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:33:19:14:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:19:16:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:36:15:21:33:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:35:35:22:13:32:94.59%:99:4.2437E-19:35:2:1:1:37 1/1:41:26:14:12:25:96.3%:99:1.4382E-14:35:1:0:1:27 1/1:37:54:25:29:57:93.1%:99:9.0836E-29:32:4:1:3:60 1/1:43:38:20:18:38:97.44%:99:1.4697E-21:60:1:0:1:39 1/1:42:40:22:18:42:93.02%:99:2.287E-21:43:3:1:2:43 1/1:41:42:28:14:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:36:21:15:36:97.3%:99:2.1762E-20:35:1:0:1:37 1/1:44:20:8:12:22:90.91%:98:1.3117E-10:32:2:1:1:22 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:33:16:17:34:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:42:28:15:13:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:25:17:8:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:47:26:21:46:97.92%:99:7.6145E-27:32:1:0:1:48 1/1:40:29:21:8:28:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 3191195 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|cdsA_Rv2881c|gene2941|transcript|Transcript_gene2941|Coding|1/1|c.427G>A|p.Gly143Arg|427/921|427/921|143/306||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3191195C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3191195C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:30:0%:55:1E0:38:30:21:9:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:17:5:22 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:38 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:30 0/0:0:0:0:0:54:0%:99:1E0:42:54:33:21:54 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:20 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:47 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:22 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:26 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:41:21:16:5:21 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:25:12:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:11:0%:22:1E0:39:11:8:3:11 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:16 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:36 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:37 0/0:0:0:0:0:54:0%:99:1E0:43:54:26:28:55 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:36 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:12:0%:21:1E0:38:12:9:3:12 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:36 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:44 0/0:0:0:0:0:14:0%:25:1E0:43:14:6:8:14 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:26 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:27:11:39 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:29:13:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:39 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:43:0%:82:1E0:39:43:28:15:44 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:40:40:27:13:40 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:15:0%:29:1E0:47:15:10:5:15 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:13:0%:25:1E0:43:13:6:7:13 0/0:0:0:0:0:23:0%:44:1E0:40:23:16:7:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:18 0/0:0:0:0:0:25:0%:48:1E0:39:25:18:7:25 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:49 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:21:10:31 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:18 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:34 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:22:0%:40:1E0:38:22:16:6:22 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:34 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:35 0/0:0:0:0:0:42:0%:77:1E0:38:42:31:11:44 0/0:0:0:0:0:39:0%:74:1E0:37:39:22:17:42 0/0:0:0:0:0:32:0%:59:1E0:39:32:22:10:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:29 0/0:37:4:3:1:27:14.81%:23:5.5494E-2:35:23:14:9:28 0/1:38:9:2:7:61:14.75%:28:1.4219E-3:39:52:29:23:61 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:27 0/0:0:0:0:0:17:0%:33:1E0:38:17:11:6:19 0/0:0:0:0:0:35:0%:67:1E0:37:35:20:15:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:23:11:35 0/0:0:0:0:0:44:0%:81:1E0:38:44:29:15:44 0/0:0:0:0:0:28:0%:51:1E0:36:28:23:5:28 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:35 0/0:0:0:0:0:37:0%:70:1E0:37:37:21:16:37 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:45 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:25 0/0:0:0:0:0:26:0%:47:1E0:36:26:14:12:28 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:25 0/0:0:0:0:0:18:0%:32:1E0:39:18:12:6:20 0/0:0:0:0:0:50:0%:92:1E0:37:50:36:14:52 0/0:37:1:1:0:41:2.44%:66:5E-1:40:40:25:15:42 0/0:39:1:0:1:29:3.45%:45:5E-1:39:28:14:14:30 0/0:0:0:0:0:31:0%:59:1E0:38:31:22:9:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:23 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:44:0%:81:1E0:39:44:26:18:44 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:21 0/0:0:0:0:0:36:0%:66:1E0:37:36:20:16:36 0/0:0:0:0:0:39:0%:74:1E0:38:39:17:22:39 0/0:0:0:0:0:55:0%:99:1E0:39:55:32:23:55 0/0:0:0:0:0:34:0%:62:1E0:38:34:24:10:35 MTB_anc 3194705 . ACAGTTCGGTGGTGCGCTCACAGTAGCGGCGTGAGCCTTTCGTGCAGCGTGAGCGTGCGCGGCTGACGCGGCGCAACCCGCGCAACG A . PASS AC=111;AF=0.399;AN=278;ANN=A|frameshift_variant|HIGH|Rv2885c_Rv2885c|gene2945|transcript|Transcript_gene2945|Coding|1/1|c.758_843delCGTTGCGCGGGTTGCGCCGCGTCAGCCGCGCACGCTCACGCTGCACGAAAGGCTCACGCCGCTACTGTGAGCGCACCACCGAACTG|p.Ala253fs|843/1383|758/1383|253/460||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3194706_3194791delCAGTTCGGTGGTGCGCTCACAGTAGCGGCGTGAGCCTTTCGTGCAGCGTGAGCGTGCGCGGCTGACGCGGCGCAACCCGCGCAACG||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3194706_3194791delCAGTTCGGTGGTGCGCTCACAGTAGCGGCGTGAGCCTTTCGTGCAGCGTGAGCGTGCGCGGCTGACGCGGCGCAACCCGCGCAACG||||||;HOM=0;LOF=(Rv2885c_Rv2885c|gene2945|1|1.00);set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:16:11:5:24:66.67%:64:3.2617E-7:42:8:3:5:25 0/0:60:3:0:3:10:30%:4:1.0526E-1:44:7:5:2:10 0/1:51:13:6:7:23:56.52%:49:1.1242E-5:39:10:6:4:23 0/1:57:7:3:4:14:50%:25:2.8986E-3:52:7:2:5:14 0/1:50:7:3:4:15:46.67%:25:3.1609E-3:39:8:3:5:15 0/0:51:3:2:1:16:18.75%:11:1.129E-1:39:13:6:7:16 0/1:55:8:5:3:15:53.33%:29:1.0995E-3:51:7:2:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:54:6:2:4:20:30%:7:1.0098E-2:45:14:6:8:20 0/1:51:8:5:3:22:36.36%:27:1.8042E-3:46:14:6:8:22 0/1:56:6:2:4:11:54.55%:22:6.192E-3:46:5:3:2:11 0/1:47:8:4:4:21:36.36%:27:1.8042E-3:38:14:6:8:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:46:16:6:10:29:55.17%:60:8.4872E-7:40:13:8:5:29 0/1:57:8:4:4:14:57.14%:30:9.6618E-4:41:6:4:2:14 0/0:60:4:1:3:17:23.53%:11:5.132E-2:45:13:4:9:17 0/1:55:6:2:4:13:46.15%:21:7.4534E-3:46:7:3:4:13 0/1:47:7:1:6:16:43.75%:24:3.3988E-3:48:9:3:6:16 0/1:52:10:5:5:17:58.82%:38:1.4831E-4:44:7:2:5:17 0/1:60:7:5:2:20:35%:23:4.158E-3:48:13:6:7:20 0/1:43:7:5:2:16:43.75%:24:3.3988E-3:42:9:3:6:16 0/1:52:18:9:9:37:48.65%:66:2.432E-7:39:19:7:12:37 0/0:55:5:2:3:19:26.32%:10:2.3166E-2:39:14:8:6:19 0/1:54:8:4:4:21:38.1%:27:1.7241E-3:46:13:6:7:24 0/1:51:10:8:2:20:50%:36:2.1796E-4:37:10:2:8:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:54:8:4:4:18:44.44%:28:1.4461E-3:47:10:5:5:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:52:3:3:0:16:18.75%:11:1.129E-1:42:13:7:6:16 0/1:51:7:3:4:13:53.85%:25:2.6087E-3:37:6:3:3:13 0/1:48:12:1:11:22:54.55%:45:3.066E-5:45:10:5:5:22 0/1:45:10:2:8:16:62.5%:39:1.2413E-4:37:6:2:4:16 0/0:48:4:4:0:12:33.33%:4:4.6584E-2:48:8:3:5:12 0/0:45:5:4:1:13:38.46%:4:1.9565E-2:42:8:3:5:14 0/1:41:7:5:2:14:50%:25:2.8986E-3:44:7:2:5:14 0/1:56:7:4:3:16:43.75%:24:3.3988E-3:42:9:2:7:16 0/1:52:12:7:5:25:48%:43:4.2836E-5:42:13:11:2:25 0/1:53:17:7:10:30:56.67%:65:3.0928E-7:41:13:9:4:31 0/1:51:12:6:6:22:54.55%:45:3.066E-5:42:10:6:4:22 0/1:45:19:8:11:32:59.38%:73:3.9837E-8:36:13:4:9:32 0/1:55:9:3:6:21:42.86%:31:6.592E-4:40:12:7:5:21 0/1:48:10:4:6:18:55.56%:37:1.7215E-4:42:8:3:5:18 0/1:48:6:4:2:12:50%:21:6.865E-3:42:6:2:4:12 0/0:54:4:2:2:10:40%:3:4.3344E-2:44:6:2:4:10 0/1:48:6:6:0:16:37.5%:20:8.837E-3:44:10:5:5:16 0/1:43:10:4:6:23:41.67%:35:2.9985E-4:41:14:7:7:24 0/0:48:4:1:3:10:40%:3:4.3344E-2:43:6:2:4:10 0/1:49:11:7:4:22:50%:40:9.1981E-5:37:11:7:4:23 0/1:50:10:7:3:23:43.48%:35:2.8066E-4:41:13:4:9:24 0/1:54:8:5:3:22:34.78%:27:1.8791E-3:46:15:9:6:24 0/1:45:7:4:3:17:41.18%:24:3.6151E-3:42:10:3:7:17 0/1:55:9:5:4:16:56.25%:33:4.0786E-4:36:7:3:4:16 0/1:54:8:4:4:20:40%:27:1.638E-3:43:12:5:7:20 0/1:46:7:4:3:9:77.78%:29:1.1312E-3:37:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:50:22:14:8:36:61.11%:86:2.1194E-9:39:14:7:7:36 0/0:46:5:3:2:12:41.67%:3:1.8634E-2:37:7:4:3:12 0/1:47:9:6:3:16:56.25%:33:4.0786E-4:37:7:4:3:16 0/1:50:7:3:4:21:33.33%:23:4.3101E-3:39:14:7:7:21 0/0:48:6:1:5:20:30%:7:1.0098E-2:42:14:8:6:20 0/1:44:10:6:4:17:58.82%:38:1.4831E-4:41:7:3:4:17 0/0:50:5:1:4:14:35.71%:4:2.037E-2:41:9:5:4:15 0/1:44:10:4:6:22:45.45%:35:2.6061E-4:40:12:7:5:23 0/1:52:11:5:6:17:64.71%:43:4.3258E-5:41:6:5:1:17 0/1:51:13:8:5:24:54.17%:48:1.2938E-5:45:11:8:3:24 0/1:56:26:15:11:39:66.67%:99:2.3331E-11:43:13:5:8:40 0/1:51:8:4:4:18:44.44%:28:1.4461E-3:44:10:4:6:18 0/1:47:13:8:5:24:54.17%:48:1.2938E-5:49:11:4:7:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:60:2:1:1:10:20%:7:2.3684E-1:43:8:4:4:10 0/1:53:7:2:5:14:50%:25:2.8986E-3:38:7:4:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:55:6:2:4:10:60%:22:5.418E-3:37:4:1:3:10 0/1:51:11:7:4:20:55%:41:7.2653E-5:45:9:7:2:20 0/1:45:11:4:7:15:68.75%:44:3.3854E-5:42:5:3:2:16 0/0:42:4:1:3:14:28.57%:6:4.8889E-2:47:10:3:7:14 0/1:47:8:6:2:18:44.44%:28:1.4461E-3:44:10:5:5:18 0/1:55:15:6:9:24:62.5%:59:1.196E-6:50:9:4:5:24 0/1:46:9:4:5:18:50%:32:5.1645E-4:40:9:6:3:18 0/1:51:12:7:5:25:48%:43:4.2836E-5:39:13:6:7:25 0/0:45:5:2:3:12:41.67%:3:1.8634E-2:45:7:3:4:12 0/1:41:11:5:6:18:57.89%:42:6.2811E-5:40:8:7:1:19 0/1:50:13:9:4:21:61.9%:50:7.9741E-6:42:8:5:3:21 0/0:55:5:4:1:12:41.67%:3:1.8634E-2:41:7:2:5:12 0/1:41:6:4:2:11:54.55%:22:6.192E-3:40:5:2:3:13 0/0:44:5:4:1:13:38.46%:4:1.9565E-2:36:8:1:7:13 0/1:56:6:5:1:12:50%:21:6.865E-3:48:6:2:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:54:8:7:1:20:40%:27:1.638E-3:42:12:8:4:20 0/1:60:7:3:4:19:36.84%:23:3.9926E-3:49:12:9:3:19 0/1:54:9:3:6:25:36%:30:8.1542E-4:40:16:9:7:25 0/0:52:3:2:1:9:33.33%:4:1.0294E-1:40:6:2:4:9 0/1:49:11:5:6:18:61.11%:42:5.2969E-5:40:7:2:5:18 0/1:57:8:6:2:13:61.54%:30:8.238E-4:42:5:2:3:13 0/1:48:14:6:8:25:56%:53:4.7528E-6:44:11:4:7:25 0/1:48:11:5:6:17:64.71%:43:4.3258E-5:37:6:1:5:17 0/0:43:3:2:1:11:27.27%:7:1.0714E-1:45:8:5:3:11 0/0:35:4:3:1:18:22.22%:10:5.1948E-2:43:14:7:7:18 0/1:54:15:9:6:23:65.22%:60:9.5813E-7:37:8:4:4:24 0/1:44:11:5:6:23:47.83%:39:1.0135E-4:41:12:4:8:24 0/1:53:7:1:6:14:50%:25:2.8986E-3:39:7:4:3:14 0/1:47:8:5:3:18:44.44%:28:1.4461E-3:38:10:5:5:18 0/1:43:7:3:4:19:36.84%:23:3.9926E-3:45:12:7:5:19 0/1:43:6:4:2:14:42.86%:20:7.971E-3:43:8:6:2:15 0/1:48:10:7:3:20:50%:36:2.1796E-4:36:10:2:8:20 0/1:48:11:9:2:19:57.89%:42:6.2811E-5:43:8:4:4:19 0/1:51:8:2:6:15:53.33%:29:1.0995E-3:37:7:3:4:16 0/1:45:13:6:7:25:50%:47:1.6379E-5:37:13:6:7:26 0/1:54:8:4:4:17:47.06%:28:1.3389E-3:38:9:2:7:17 0/0:55:5:3:2:13:38.46%:4:1.9565E-2:46:8:2:6:13 0/1:50:13:6:7:22:59.09%:50:9.5813E-6:38:9:5:4:22 0/1:49:9:5:4:15:60%:34:3.4983E-4:38:6:2:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:54:9:6:3:18:50%:32:5.1645E-4:38:9:5:4:18 0/0:38:3:2:1:14:21.43%:9:1.1111E-1:39:11:6:5:14 0/1:52:11:7:4:21:52.38%:40:8.2399E-5:39:10:4:6:21 0/0:48:4:3:1:20:20%:13:5.3015E-2:40:16:10:6:20 0/1:53:8:3:5:18:44.44%:28:1.4461E-3:43:10:4:6:18 0/0:45:3:2:1:15:20%:11:1.1207E-1:37:12:4:8:15 0/1:57:10:5:5:16:62.5%:39:1.2413E-4:37:6:3:3:16 0/1:51:18:8:10:32:56.25%:68:1.3089E-7:36:14:8:6:32 0/1:56:6:2:4:11:54.55%:22:6.192E-3:42:5:2:3:11 0/0:54:4:3:1:10:40%:3:4.3344E-2:40:6:3:3:10 0/1:51:10:4:6:23:43.48%:35:2.8066E-4:38:13:7:6:25 0/1:55:9:1:8:16:56.25%:33:4.0786E-4:38:7:2:5:16 0/1:48:15:10:5:27:55.56%:56:2.0087E-6:39:12:4:8:27 0/1:36:6:2:4:19:30%:20:9.828E-3:37:13:7:6:21 0/1:51:9:4:5:28:32.14%:30:9.1169E-4:37:19:10:9:29 0/1:48:16:7:9:25:64%:63:4.1493E-7:36:9:6:3:26 0/1:53:7:7:0:20:35%:23:4.158E-3:41:13:6:7:20 0/0:49:4:3:1:19:21.05%:13:5.251E-2:37:15:7:8:19 0/1:47:13:6:7:26:50%:47:1.6379E-5:38:13:4:9:26 0/1:54:9:4:5:18:50%:32:5.1645E-4:38:9:2:7:18 0/1:38:8:3:5:22:36.36%:27:1.8042E-3:38:14:6:8:22 0/1:48:11:3:8:24:45.83%:39:1.1047E-4:39:13:7:6:24 0/1:45:8:4:4:16:50%:29:1.2236E-3:41:8:7:1:16 0/1:47:6:2:4:17:35.29%:20:9.2021E-3:36:11:4:7:17 0/1:51:8:5:3:17:47.06%:28:1.3389E-3:40:9:5:4:17 0/1:53:14:9:5:26:53.85%:52:5.4595E-6:46:12:7:5:27 0/1:53:7:4:3:16:43.75%:24:3.3988E-3:45:9:5:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:60:1:0:1:9:11.11%:11:5E-1:40:8:5:3:9 0/1:53:7:4:3:18:38.89%:24:3.8123E-3:40:11:5:6:19 0/1:56:7:3:4:20:35%:23:4.158E-3:44:13:5:8:20 0/1:55:10:2:8:23:43.48%:35:2.8066E-4:37:13:10:3:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:52:6:5:1:18:33.33%:20:9.5308E-3:38:12:4:8:18 0/1:50:15:9:6:23:65.22%:60:9.5813E-7:45:8:5:3:23 0/1:45:11:5:6:27:40.74%:38:1.362E-4:36:16:7:9:28 0/1:42:10:7:3:20:50%:36:2.1796E-4:36:10:5:5:20 MTB_anc 3195042 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|synonymous_variant|LOW|Rv2885c_Rv2885c|gene2945|transcript|Transcript_gene2945|Coding|1/1|c.507C>T|p.Tyr169Tyr|507/1383|507/1383|169/460||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3195042G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3195042G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:38:54:26:28:54 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:17 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:41 0/0:0:0:0:0:27:0%:52:1E0:39:27:8:19:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:5:23:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:30 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:31 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/0:0:0:0:0:17:0%:33:1E0:44:17:5:12:18 0/0:0:0:0:0:43:0%:82:1E0:37:43:20:23:43 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:29 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:25 0/0:0:0:0:0:25:0%:48:1E0:40:25:9:16:26 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:15 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:20 0/0:0:0:0:0:36:0%:66:1E0:38:36:13:23:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:37 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:64:0%:99:1E0:40:64:27:37:65 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:47 0/0:0:0:0:0:51:0%:97:1E0:37:51:18:33:52 0/0:0:0:0:0:34:0%:62:1E0:38:34:11:23:34 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:38 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:23 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:20:12:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:18 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:31 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:16 0/0:0:0:0:0:51:0%:97:1E0:38:51:18:33:53 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:30 0/0:0:0:0:0:19:0%:37:1E0:39:19:6:13:20 0/0:0:0:0:0:42:0%:77:1E0:37:42:12:30:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:26 0/0:0:0:0:0:27:0%:52:1E0:38:27:8:19:28 0/0:0:0:0:0:32:0%:59:1E0:37:32:11:21:32 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 0/0:39:1:0:1:33:3.03%:52:5E-1:38:32:17:15:33 0/0:0:0:0:0:62:0%:99:1E0:38:61:27:34:65 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:18 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:20 0/0:0:0:0:0:35:0%:67:1E0:38:35:8:27:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:26 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:12 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:39 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:23 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:5:21:27 0/0:37:1:1:0:33:3.03%:52:5E-1:40:32:10:22:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 0/0:0:0:0:0:45:0%:85:1E0:37:45:10:35:47 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:32:0%:59:1E0:37:32:15:17:32 0/0:0:0:0:0:32:0%:59:1E0:37:32:10:22:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:28 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:14 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:22 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:27 0/0:0:0:0:0:39:0%:74:1E0:38:39:14:25:40 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:19 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:23 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:23 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:35 0/0:0:0:0:0:39:0%:74:1E0:37:39:17:22:40 0/0:0:0:0:0:19:0%:37:1E0:36:19:6:13:20 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:16 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:32:0%:59:1E0:36:32:13:19:35 0/0:0:0:0:0:25:0%:48:1E0:38:25:4:21:26 0/0:0:0:0:0:25:0%:48:1E0:37:25:5:20:25 0/0:0:0:0:0:15:0%:29:1E0:40:15:7:8:15 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:36:0%:66:1E0:37:36:13:23:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 0/0:0:0:0:0:18:0%:32:1E0:42:18:5:13:19 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:23 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:9 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:37 0/0:37:1:0:1:25:4%:38:5E-1:37:24:8:16:25 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:34 0/0:0:0:0:0:35:0%:67:1E0:36:35:8:27:37 0/0:0:0:0:0:46:0%:85:1E0:39:46:19:27:46 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:46 0/0:0:0:0:0:47:0%:89:1E0:39:47:22:25:47 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:28 0/0:0:0:0:0:42:0%:77:1E0:37:42:12:30:43 0/0:0:0:0:0:30:0%:55:1E0:36:30:8:22:30 0/0:0:0:0:0:36:0%:66:1E0:37:36:15:21:36 0/0:0:0:0:0:37:0%:70:1E0:37:37:13:24:37 0/0:0:0:0:0:51:0%:97:1E0:37:51:16:35:51 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:22 0/0:0:0:0:0:35:0%:67:1E0:37:35:10:25:37 0/0:0:0:0:0:37:0%:70:1E0:37:37:12:25:38 0/0:0:0:0:0:38:0%:70:1E0:37:38:17:21:39 0/0:0:0:0:0:31:0%:59:1E0:38:31:16:15:31 0/0:0:0:0:0:44:0%:81:1E0:36:44:14:30:44 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:31 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:34 0/0:0:0:0:0:32:0%:59:1E0:38:32:12:20:33 0/0:0:0:0:0:38:0%:70:1E0:37:38:15:23:39 0/0:0:0:0:0:37:0%:70:1E0:36:37:14:23:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:35 0/0:0:0:0:0:31:0%:59:1E0:37:31:9:22:31 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:24 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:35 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:24 0/0:0:0:0:0:35:0%:67:1E0:38:35:12:23:37 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:36 0/0:0:0:0:0:45:0%:85:1E0:36:45:14:31:47 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:23 MTB_anc 3195731 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv2886c_Rv2886c|gene2946|transcript|Transcript_gene2946|Coding|1/1|c.702G>A|p.Val234Val|702/888|702/888|234/295||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3195731C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3195731C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:26:17:9:27:96.3%:99:2.0165E-15:0:0:0:0:31 1/1:38:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:34:13:21:35:97.14%:99:3.5146E-20:0:0:0:0:37 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:36:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:54 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:36:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:25:16:9:26:96.15%:99:5.4444E-14:38:1:1:0:31 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:35:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:16 1/1:36:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:34:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:35:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:36:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 MTB_anc 3200304 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2891_Rv2891|gene2951|transcript|Transcript_gene2951|Coding|1/1|c.39G>A|p.Val13Val|39/750|39/750|13/249||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3200304G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3200304G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:23:10:13:24:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:32:16:16:33:96.97%:99:5.4567E-19:0:0:0:0:35 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:44:12:32:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 3200902 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|stop_gained|HIGH|Rv2891_Rv2891|gene2951|transcript|Transcript_gene2951|Coding|1/1|c.637C>T|p.Gln213*|637/750|637/750|213/249||,T|synonymous_variant|LOW|PPE45_Rv2892c|gene2952|transcript|Transcript_gene2952|Coding|1/1|c.1119G>A|p.Leu373Leu|1119/1227|1119/1227|373/408||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3200902C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3200902C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3200902C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:44 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:17 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:16:0%:29:1E0:36:16:11:5:17 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:23:0%:44:1E0:41:23:18:5:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:9:0%:18:1E0:41:9:4:5:9 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 0/0:0:0:0:0:25:0%:48:1E0:38:25:17:8:26 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:33 0/0:0:0:0:0:18:0%:32:1E0:40:18:13:5:18 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:52:0%:96:1E0:43:52:31:21:52 0/0:60:1:1:0:45:2.22%:73:5E-1:42:44:22:22:48 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:44 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:60:1:1:0:19:5.26%:28:5E-1:40:18:8:10:19 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:41:0%:78:1E0:39:41:27:14:42 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:18 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:16:0%:29:1E0:45:16:5:11:17 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:47 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:38 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:22 0/0:0:0:0:0:34:0%:62:1E0:39:34:24:10:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:42 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:25 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:51 0/0:0:0:0:0:59:0%:99:1E0:39:59:36:23:60 0/0:0:0:0:0:23:0%:44:1E0:38:23:10:13:23 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:33 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:20 0/0:0:0:0:0:39:0%:74:1E0:48:39:24:15:39 0/0:0:0:0:0:51:0%:97:1E0:39:51:25:26:52 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:34 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:42 0/0:0:0:0:0:34:0%:62:1E0:38:34:24:10:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:11:0%:22:1E0:46:11:7:4:12 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:40:0%:74:1E0:37:40:24:16:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:40:40:26:14:40 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:19 0/0:0:0:0:0:30:0%:55:1E0:37:30:18:12:30 0/0:60:1:0:1:32:3.12%:48:5E-1:43:31:14:17:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:36 0/0:0:0:0:0:35:0%:67:1E0:39:35:24:11:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:29:0%:55:1E0:35:29:16:13:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:22:0%:40:1E0:36:22:12:10:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:12:7:19 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:23 0/0:0:0:0:0:30:0%:55:1E0:35:30:22:8:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:37:32:21:11:34 0/0:0:0:0:0:27:0%:52:1E0:36:27:21:6:28 0/0:0:0:0:0:41:0%:78:1E0:37:41:24:17:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:35 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:20 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:42 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:43 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:27 0/0:0:0:0:0:40:0%:74:1E0:38:40:29:11:40 0/0:0:0:0:0:36:0%:66:1E0:36:36:28:8:38 0/0:0:0:0:0:37:0%:70:1E0:36:37:23:14:39 0/0:0:0:0:0:38:0%:70:1E0:37:38:20:18:40 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:39 0/0:0:0:0:0:30:0%:55:1E0:36:30:19:11:30 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:26 0/0:0:0:0:0:22:0%:40:1E0:38:22:14:8:22 0/0:0:0:0:0:35:0%:67:1E0:37:35:19:16:35 0/0:0:0:0:0:19:0%:37:1E0:37:19:13:6:23 0/0:32:1:0:1:32:3.12%:48:5E-1:36:31:17:14:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:24:7:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:23:7:30 0/0:0:0:0:0:38:0%:70:1E0:38:38:20:18:39 0/0:0:0:0:0:41:0%:78:1E0:40:41:25:16:44 0/0:0:0:0:0:39:0%:74:1E0:39:39:27:12:41 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:42 0/0:0:0:0:0:20:0%:36:1E0:43:20:16:4:20 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:24:9:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 MTB_anc 3206398 . A C . PASS AC=16;AF=0.053;AN=300;ANN=C|missense_variant|MODERATE|Rv2896c_Rv2896c|gene2956|transcript|Transcript_gene2956|Coding|1/1|c.37T>G|p.Ser13Ala|37/1170|37/1170|13/389||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3206398A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3206398A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:15:0%:29:1E0:44:15:5:10:15 0/0:0:0:0:0:54:0%:99:1E0:42:54:28:26:54 0/0:0:0:0:0:15:0%:29:1E0:44:15:4:11:17 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:20 0/0:0:0:0:0:25:0%:48:1E0:49:25:17:8:26 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:19:0%:37:1E0:40:19:14:5:19 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:18 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:35 0/0:0:0:0:0:16:0%:29:1E0:53:16:9:7:18 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:44 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:39 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:21 0/0:0:0:0:0:21:0%:40:1E0:46:21:14:7:22 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:19 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:20 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:22 0/0:0:0:0:0:47:0%:89:1E0:45:47:28:19:47 0/0:0:0:0:0:16:0%:29:1E0:47:16:5:11:18 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:40 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:18 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:31:13:46 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:46:0%:85:1E0:46:46:17:29:46 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:40 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:9:23:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:34 0/0:0:0:0:0:40:0%:74:1E0:46:40:24:16:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:37 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:45 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:46 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:12:0%:21:1E0:49:12:2:10:13 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:14:0%:25:1E0:51:14:5:9:15 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:52:0%:96:1E0:45:52:32:20:56 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:49 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:48 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:24 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:17 0/0:0:0:0:0:26:0%:47:1E0:50:26:12:14:27 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:43 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:29 0/0:0:0:0:0:36:0%:66:1E0:47:36:22:14:37 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:35 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:21 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:31 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:18:0%:32:1E0:50:18:12:6:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:24:0%:44:1E0:49:24:8:16:24 0/0:0:0:0:0:54:0%:99:1E0:43:54:28:26:57 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:48 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:23:10:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:34 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 0/0:0:0:0:0:19:0%:37:1E0:46:19:13:6:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:28 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:21 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:40:0%:74:1E0:37:40:19:21:42 0/0:0:0:0:0:31:0%:59:1E0:36:31:17:14:32 0/0:0:0:0:0:39:0%:74:1E0:40:39:26:13:43 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:40:0%:74:1E0:43:40:12:28:42 0/0:0:0:0:0:46:0%:85:1E0:42:46:18:28:47 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:18 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:46 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:42:0%:77:1E0:38:42:20:22:44 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 1/1:41:29:11:18:30:96.67%:99:2.6212E-16:60:1:1:0:33 0/0:0:0:0:0:35:0%:67:1E0:38:35:16:19:37 0/0:60:1:1:0:31:3.23%:48:5E-1:38:30:18:12:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:31 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:27 0/0:0:0:0:0:55:0%:99:1E0:37:55:26:29:59 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:41 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:50 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:50 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:38 MTB_anc 3215368 . C T . PASS AC=26;AF=0.087;AN=300;ANN=T|synonymous_variant|LOW|lppW_Rv2905|gene2965|transcript|Transcript_gene2965|Coding|1/1|c.741C>T|p.Asp247Asp|741/945|741/945|247/314||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3215368C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3215368C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:58:0%:99:1E0:43:58:28:30:58 0/0:0:0:0:0:21:0%:40:1E0:48:21:15:6:21 0/0:0:0:0:0:43:0%:82:1E0:48:43:20:23:43 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:28 0/0:0:0:0:0:40:0%:74:1E0:49:40:15:25:40 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:52:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:48:29:10:19:29 0/0:0:0:0:0:57:0%:99:1E0:43:57:35:22:58 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:20 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:21 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 1/1:51:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:52:0%:96:1E0:43:52:24:28:52 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:49:0%:93:1E0:46:49:24:25:49 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:64:0%:99:1E0:49:64:40:24:64 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:38 0/0:0:0:0:0:58:0%:99:1E0:44:58:30:28:58 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:18:0%:32:1E0:45:18:6:12:18 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:37:0%:66:1E0:45:36:13:23:38 0/0:0:0:0:0:45:0%:85:1E0:43:45:29:16:46 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:60:1:1:0:30:3.33%:44:5E-1:39:29:16:13:30 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:51 0/0:60:1:1:0:35:2.86%:55:5E-1:43:34:19:15:35 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 0/0:0:0:0:0:49:0%:93:1E0:43:49:26:23:49 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:25:0%:48:1E0:50:25:11:14:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:56:0%:99:1E0:46:56:25:31:57 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:60:1:0:1:23:4.35%:34:5E-1:45:22:11:11:23 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:23:0%:44:1E0:54:23:13:10:23 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:21 0/0:0:0:0:0:38:0%:70:1E0:53:38:24:14:38 0/0:0:0:0:0:50:0%:92:1E0:42:50:21:29:51 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:19:7:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:39 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:24:25:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:32 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:0:0:0:0:36:0%:66:1E0:47:36:13:23:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:23:0%:44:1E0:52:23:12:11:23 0/0:0:0:0:0:66:0%:99:1E0:40:66:32:34:66 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:50:0%:92:1E0:45:50:20:30:50 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:22:0%:40:1E0:41:22:8:14:22 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:19 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:31 0/0:0:0:0:0:45:0%:85:1E0:46:45:27:18:45 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:45:0%:85:1E0:41:45:29:16:46 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:57 0/0:0:0:0:0:65:0%:99:1E0:44:65:37:28:66 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:19:0%:37:1E0:42:19:13:6:20 0/0:0:0:0:0:48:0%:89:1E0:39:48:21:27:49 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:50:0%:92:1E0:40:50:24:26:51 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:39 0/0:0:0:0:0:58:0%:99:1E0:39:58:33:25:58 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:47 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:32 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:51 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:37:1:0:1:44:2.27%:69:5E-1:38:43:18:25:44 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:15:26:41 0/0:0:0:0:0:53:0%:99:1E0:39:53:35:18:53 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:50:0%:92:1E0:41:50:29:21:50 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:55:0%:99:1E0:38:55:27:28:55 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 MTB_anc 3219109 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|dacB2_Rv2911|gene2971|transcript|Transcript_gene2971|Coding|1/1|c.771G>T|p.Met257Ile|771/876|771/876|257/291||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3219109G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|beta-lactams|||n.3219109G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3219109G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:19:0%:37:1E0:51:19:11:8:19 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:31:0%:59:1E0:51:31:15:16:31 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:21 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:18 0/0:0:0:0:0:31:0%:59:1E0:49:31:10:21:31 0/0:0:0:0:0:24:0%:44:1E0:45:24:18:6:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:9:28:37 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:51:0%:97:1E0:45:51:16:35:53 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:18:0%:32:1E0:51:18:7:11:19 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:26 0/0:0:0:0:0:17:0%:33:1E0:47:17:8:9:17 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:46:0%:85:1E0:44:46:16:30:47 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:19 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:12:22:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:36 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:29:12:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:50:0%:92:1E0:46:50:26:24:50 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:44:0%:81:1E0:47:44:22:22:44 0/0:0:0:0:0:26:0%:47:1E0:45:26:8:18:28 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:38 0/0:0:0:0:0:35:0%:67:1E0:49:35:20:15:35 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:14 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:23 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:34:0%:62:1E0:41:34:11:23:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:43 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:45 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:27 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:46 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:50:0%:92:1E0:43:50:24:26:52 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:52:0%:96:1E0:46:52:20:32:52 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:28 0/0:0:0:0:0:23:0%:44:1E0:49:23:11:12:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:25:0%:48:1E0:51:25:14:11:25 0/0:0:0:0:0:17:0%:33:1E0:51:17:9:8:18 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:8:18:26 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:35 0/0:0:0:0:0:59:0%:99:1E0:43:59:29:30:60 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:44 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:15:7:22 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:9:22:31 0/0:0:0:0:0:30:0%:55:1E0:52:30:14:16:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:22 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:41:0%:78:1E0:38:41:23:18:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:55:0%:99:1E0:43:55:25:30:56 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:44 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:16:0%:29:1E0:41:16:5:11:16 0/0:0:0:0:0:44:0%:81:1E0:40:44:24:20:48 0/0:0:0:0:0:44:0%:81:1E0:41:44:15:29:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:43 0/0:0:0:0:0:31:0%:59:1E0:38:31:10:21:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:44 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:43 0/0:0:0:0:0:26:0%:47:1E0:38:26:20:6:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:37 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:21 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:56:0%:99:1E0:39:56:21:35:57 0/0:0:0:0:0:49:0%:93:1E0:42:49:29:20:49 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:38 0/0:0:0:0:0:54:0%:99:1E0:39:54:27:27:54 0/0:0:0:0:0:34:0%:62:1E0:49:34:17:17:35 0/0:0:0:0:0:21:0%:40:1E0:42:21:6:15:21 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:8:23:31 0/0:0:0:0:0:18:0%:32:1E0:44:18:12:6:18 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:38 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:45 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 MTB_anc 3219666 . C T . PASS AC=13;AF=0.043;AN=300;ANN=T|missense_variant|MODERATE|Rv2912c_Rv2912c|gene2972|transcript|Transcript_gene2972|Coding|1/1|c.196G>A|p.Val66Met|196/588|196/588|66/195||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3219666C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3219666C>T||||||;HOM=0;NC=0;set-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:3:3:0:39:7.69%:47:1.2013E-1:41:36:15:21:41 0/1:35:7:7:0:32:21.88%:22:5.4182E-3:44:25:13:12:35 0/1:36:10:10:0:49:20.41%:32:5.8675E-4:41:39:21:18:50 0/0:37:1:1:0:33:3.03%:52:5E-1:43:32:17:15:33 0/0:37:1:1:0:16:6.25%:21:5E-1:44:15:7:8:18 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/1:37:7:7:0:30:23.33%:22:5.2713E-3:48:23:12:11:30 0/0:37:1:1:0:30:3.33%:44:5E-1:43:29:16:13:30 0/0:37:1:1:0:24:4.17%:34:5E-1:45:23:13:10:25 0/0:36:3:3:0:33:9.09%:37:1.1923E-1:46:30:15:15:37 0/0:37:1:1:0:29:3.45%:45:5E-1:42:28:15:13:32 0/0:38:2:2:0:51:3.92%:74:2.4752E-1:43:49:22:27:53 0/0:36:4:4:0:22:18.18%:15:5.3885E-2:47:18:10:8:24 0/0:38:2:2:0:53:3.77%:78:2.4762E-1:42:51:22:29:53 0/0:37:1:1:0:26:3.85%:38:5E-1:41:25:10:15:26 0/0:37:2:2:0:34:5.88%:43:2.4627E-1:44:32:19:13:35 0/0:35:2:2:0:29:6.9%:37:2.4561E-1:43:27:17:10:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:34:4:4:0:30:13.33%:26:5.62E-2:46:26:11:15:32 0/0:37:2:2:0:20:10%:21:2.4359E-1:45:18:8:10:21 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:17 0/0:37:1:1:0:53:1.89%:88:5E-1:40:52:28:24:53 0/0:37:5:5:0:37:13.51%:32:2.706E-2:46:32:16:16:39 0/0:36:4:4:0:31:12.9%:29:5.6405E-2:44:27:13:14:31 0/0:35:2:2:0:29:6.9%:37:2.4561E-1:41:27:13:14:29 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:16 0/0:35:2:2:0:26:7.69%:30:2.451E-1:41:24:11:13:28 0/0:37:2:2:0:25:8%:31:2.449E-1:41:23:17:6:25 0/0:37:1:1:0:27:3.7%:41:5E-1:41:26:13:13:28 0/1:37:7:7:0:30:23.33%:22:5.2713E-3:42:23:9:14:32 0/0:33:1:1:0:28:3.57%:41:5E-1:41:27:17:10:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 0/1:34:7:7:0:34:20.59%:22:5.5492E-3:50:27:13:14:34 0/0:37:2:2:0:31:6.45%:40:2.459E-1:42:29:10:19:34 0/0:37:3:3:0:35:8.57%:40:1.1957E-1:46:32:15:17:38 0/0:37:2:2:0:37:5.41%:50:2.4658E-1:43:35:17:18:38 0/0:33:1:1:0:31:3.23%:48:5E-1:39:30:13:17:32 0/0:34:6:6:0:57:10.53%:56:1.3607E-2:46:51:25:26:58 0/1:36:12:12:0:41:29.27%:40:9.5339E-5:42:29:12:17:42 0/0:32:2:2:0:45:4.44%:64:2.4719E-1:46:43:25:18:50 0/0:34:1:1:0:32:3.12%:48:5E-1:41:31:16:15:33 0/0:33:3:3:0:38:7.89%:43:1.2E-1:42:35:16:19:42 0/0:39:1:1:0:23:4.35%:34:5E-1:43:22:14:8:23 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:22 0/0:35:3:3:0:36:8.33%:40:1.1972E-1:40:33:18:15:39 0/0:36:3:3:0:32:9.38%:34:1.1905E-1:42:29:15:14:34 0/0:37:1:1:0:32:3.12%:48:5E-1:47:31:11:20:33 0/0:0:0:0:0:39:0%:74:1E0:40:39:26:13:39 0/0:34:1:1:0:41:2.44%:66:5E-1:41:40:18:22:45 0/0:36:6:6:0:44:13.64%:36:1.3026E-2:45:38:20:18:46 0/0:35:2:2:0:24:8.33%:27:2.4468E-1:45:22:11:11:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 0/0:37:1:1:0:28:3.57%:41:5E-1:45:27:9:18:28 0/0:37:2:2:0:39:5.13%:54:2.4675E-1:47:37:20:17:41 0/0:37:1:1:0:23:4.35%:34:5E-1:43:22:11:11:23 0/0:38:2:2:0:50:4%:70:2.4747E-1:40:48:26:22:50 0/0:33:1:1:0:40:2.5%:62:5E-1:41:39:20:19:43 0/0:37:1:1:0:21:4.76%:31:5E-1:43:20:8:12:22 0/0:34:3:3:0:44:6.82%:53:1.2069E-1:41:41:21:20:45 0/0:36:5:5:0:38:13.16%:32:2.7169E-2:44:33:13:20:42 0/0:37:3:3:0:35:8.57%:40:1.1957E-1:43:32:16:16:36 0/0:37:5:5:0:36:13.89%:29:2.6944E-2:41:31:15:16:39 0/1:36:7:7:0:47:14.89%:22:6.1442E-3:41:40:20:20:50 0/0:36:4:4:0:27:14.81%:23:5.5494E-2:43:23:13:10:27 0/1:35:8:8:0:53:15.09%:25:2.9389E-3:42:45:24:21:57 0/0:36:5:5:0:53:9.43%:56:2.8317E-2:44:48:20:28:57 0/0:33:1:1:0:18:5.56%:24:5E-1:41:17:7:10:19 0/1:34:12:12:0:43:27.91%:39:1.0032E-4:45:31:17:14:48 0/0:37:3:3:0:19:15.79%:17:1.1486E-1:44:16:7:9:19 0/0:38:4:4:0:28:14.29%:23:5.5746E-2:46:24:14:10:28 0/1:34:8:8:0:48:16.67%:25:2.8457E-3:47:40:15:25:49 0/1:36:7:7:0:36:19.44%:22:5.6667E-3:47:29:13:16:38 0/0:35:2:2:0:29:6.9%:37:2.4561E-1:50:27:14:13:30 0/0:37:2:2:0:37:5.41%:50:2.4658E-1:48:35:17:18:39 0/0:27:1:1:0:35:2.86%:55:5E-1:41:34:17:17:38 0/0:38:2:2:0:35:5.71%:47:2.4638E-1:45:33:19:14:36 0/0:34:1:1:0:28:3.57%:41:5E-1:39:27:13:14:28 0/0:33:3:3:0:22:13.64%:19:1.1628E-1:44:19:8:11:22 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:25 0/0:0:0:0:0:28:0%:51:1E0:41:28:8:20:28 0/0:37:2:2:0:35:5.71%:47:2.4638E-1:41:33:17:16:36 0/0:35:2:2:0:40:5%:53:2.4684E-1:39:38:20:18:42 0/0:33:1:1:0:35:2.86%:55:5E-1:45:34:20:14:35 0/0:35:4:4:0:29:13.79%:26:5.5981E-2:52:25:16:9:29 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:23 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:32 0/0:33:1:1:0:22:4.55%:31:5E-1:42:21:8:13:26 0/0:36:2:2:0:18:11.11%:18:2.4286E-1:44:16:8:8:20 0/1:36:12:12:0:30:40%:42:6.1809E-5:51:18:9:9:32 0/0:37:6:6:0:27:22.22%:16:1.1461E-2:47:21:12:9:28 0/0:36:6:6:0:32:18.75%:20:1.2087E-2:44:26:10:16:34 0/0:35:2:2:0:21:9.52%:25:2.439E-1:48:19:13:6:23 0/0:35:2:2:0:47:4.26%:67:2.4731E-1:41:45:24:21:48 0/0:37:1:1:0:28:3.57%:41:5E-1:39:27:15:12:28 0/0:38:1:1:0:44:2.27%:69:5E-1:41:43:24:19:46 0/0:37:1:1:0:26:3.85%:38:5E-1:40:25:17:8:26 0/0:37:1:1:0:24:4.17%:34:5E-1:41:23:13:10:27 0/0:38:1:1:0:32:3.12%:48:5E-1:41:31:12:19:34 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:44 0/0:31:2:2:0:37:5.41%:50:2.4658E-1:39:35:12:23:39 0/0:38:2:2:0:24:8.33%:27:2.4468E-1:45:22:12:10:26 0/0:37:1:1:0:35:2.86%:55:5E-1:41:34:16:18:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:8:20:30 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:35 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:21 0/0:33:1:1:0:24:4.17%:34:5E-1:42:23:13:10:26 0/0:27:1:0:1:29:3.45%:41:5E-1:41:27:11:16:29 0/0:35:2:2:0:30:6.67%:37:2.4576E-1:46:28:14:14:31 0/0:36:3:3:0:30:10%:31:1.1864E-1:42:27:15:12:31 0/0:37:3:3:0:38:7.89%:43:1.2E-1:42:35:20:15:38 0/0:33:3:3:0:42:7.14%:49:1.2048E-1:44:39:19:20:44 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:20 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:35 0/0:38:1:1:0:32:3.12%:48:5E-1:41:31:10:21:32 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:30 0/0:0:0:0:0:45:0%:85:1E0:38:45:28:17:49 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:37 0/0:33:1:1:0:31:3.23%:48:5E-1:40:30:11:19:32 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:30 0/0:38:1:1:0:50:2%:80:5E-1:40:49:20:29:51 0/0:37:1:1:0:60:1.67%:98:5E-1:40:59:32:27:60 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:40 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:29 0/0:0:0:0:0:42:0%:77:1E0:37:42:22:20:43 0/0:0:0:0:0:44:0%:81:1E0:39:44:14:30:45 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:49 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:30 0/0:37:1:1:0:39:2.56%:62:5E-1:38:38:15:23:42 0/0:0:0:0:0:34:0%:62:1E0:36:34:13:21:36 0/0:0:0:0:0:36:0%:66:1E0:37:36:17:19:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:31 0/0:0:0:0:0:52:0%:96:1E0:38:52:17:35:53 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:39 0/0:0:0:0:0:32:0%:59:1E0:35:32:17:15:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:33 0/0:37:3:3:0:30:10%:31:1.1864E-1:40:27:12:15:32 0/0:33:6:6:0:54:11.11%:50:1.3497E-2:37:48:18:30:58 0/0:35:3:3:0:33:9.09%:37:1.1923E-1:42:30:15:15:34 0/0:33:2:2:0:38:5.26%:50:2.4667E-1:44:36:16:20:40 0/1:35:10:10:0:41:24.39%:32:5.2405E-4:44:31:13:18:42 0/0:37:2:2:0:50:4%:70:2.4747E-1:43:48:14:34:54 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:28 0/0:30:2:2:0:38:5.26%:50:2.4667E-1:44:36:20:16:38 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:37:1:1:0:18:5.56%:24:5E-1:39:17:8:9:19 0/0:37:1:1:0:35:2.86%:55:5E-1:41:34:15:19:37 0/0:37:3:3:0:38:7.89%:43:1.2E-1:42:35:18:17:38 0/0:38:1:1:0:49:2.04%:80:5E-1:43:48:23:25:50 0/0:36:1:1:0:25:4%:38:5E-1:38:24:11:13:26 MTB_anc 3229521 . A C . PASS AC=4;AF=0.013;AN=300;ANN=C|missense_variant|MODERATE|glnD_Rv2918c|gene2978|transcript|Transcript_gene2978|Coding|1/1|c.1160T>G|p.Leu387Arg|1160/2427|1160/2427|387/808||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3229521A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3229521A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:49 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:15 0/0:0:0:0:0:45:0%:85:1E0:44:45:27:18:45 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:15:0%:29:1E0:46:15:9:6:16 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:18:0%:32:1E0:51:18:10:8:18 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:13:0%:25:1E0:46:13:4:9:14 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:48 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:16 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:37:0%:70:1E0:38:37:22:15:38 0/0:0:0:0:0:51:0%:97:1E0:39:51:33:18:51 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:12:0%:21:1E0:47:12:4:8:13 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:16 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:24:0%:44:1E0:50:24:14:10:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:41 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:44 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:49 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:53:0%:99:1E0:43:53:23:30:55 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:13:0%:25:1E0:46:13:2:11:14 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:20:0%:36:1E0:47:20:13:7:20 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:34 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:47 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:47 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:47 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:34 0/0:0:0:0:0:52:0%:96:1E0:45:52:28:24:53 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:47 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:22 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:9:20:30 0/0:0:0:0:0:27:0%:52:1E0:50:27:19:8:28 0/0:0:0:0:0:14:0%:25:1E0:43:14:3:11:14 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:45 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:70:0%:99:1E0:42:70:37:33:71 0/0:0:0:0:0:47:0%:89:1E0:44:47:32:15:47 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:51:27:15:12:27 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:48 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:40 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:43 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:19:10:30 0/0:0:0:0:0:24:0%:44:1E0:46:24:16:8:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:39 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:47 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:46 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:46:0%:85:1E0:42:46:18:28:46 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:34 0/0:0:0:0:0:16:0%:29:1E0:43:16:9:7:17 0/0:0:0:0:0:51:0%:97:1E0:40:51:28:23:52 0/0:0:0:0:0:27:0%:52:1E0:36:27:11:16:29 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:39 0/0:0:0:0:0:48:0%:89:1E0:37:48:26:22:49 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:47 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:44 0/0:0:0:0:0:50:0%:92:1E0:40:50:21:29:52 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:28 0/0:0:0:0:0:49:0%:93:1E0:39:49:29:20:49 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:36 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 0/0:0:0:0:0:40:0%:74:1E0:37:40:23:17:41 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:39 0/0:0:0:0:0:44:0%:81:1E0:39:44:26:18:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:28:18:49 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:42 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:19 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:54:0%:99:1E0:44:54:26:28:56 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:20 MTB_anc 3232703 . G A . PASS AC=136;AF=0.453;AN=300;ANN=A|intergenic_region|MODIFIER|amt_Rv2920c-ftsY_Rv2921c|gene2980-gene2981|intergenic_region|gene2980-gene2981|||n.3232703G>A||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:24:17:7:80:30%:81:7.8121E-9:44:56:31:25:96 0/0:36:5:5:0:18:27.78%:8:2.2727E-2:44:13:6:7:18 0/1:45:16:11:5:62:25.81%:52:5.0299E-6:50:46:30:16:79 0/1:37:8:7:1:25:32%:26:2.0146E-3:47:17:9:8:28 0/1:37:13:11:2:46:28.26%:43:4.5578E-5:45:33:16:17:58 0/1:37:13:10:3:29:44.83%:46:2.1506E-5:47:16:8:8:32 0/0:37:6:4:2:33:18.18%:23:1.219E-2:51:27:14:13:38 0/0:47:3:3:0:25:12%:25:1.1735E-1:47:22:13:9:33 0/1:36:11:9:2:32:34.38%:37:1.7351E-4:48:21:7:14:34 0/0:43:4:3:1:28:14.29%:23:5.5746E-2:53:24:12:12:34 0/1:40:9:9:0:31:29.03%:30:9.9376E-4:45:22:12:10:36 0/1:37:12:12:0:55:21.82%:39:1.2473E-4:49:43:24:19:64 0/0:34:4:1:3:28:14.29%:23:5.5746E-2:53:24:18:6:32 0/1:36:13:10:3:45:28.89%:43:4.4424E-5:50:32:15:17:59 0/1:38:10:8:2:26:38.46%:34:3.3576E-4:42:16:8:8:30 0/1:37:11:9:2:41:26.83%:36:2.2563E-4:42:30:17:13:45 0/0:42:6:5:1:22:27.27%:9:1.057E-2:45:16:8:8:27 0/1:41:8:6:2:23:34.78%:27:1.8791E-3:52:15:13:2:27 0/1:35:7:4:3:17:41.18%:24:3.6151E-3:42:10:5:5:19 0/0:46:3:2:1:24:12.5%:22:1.1702E-1:50:21:15:6:29 0/1:47:7:6:1:38:18.42%:22:5.7727E-3:43:31:18:13:49 0/1:43:15:14:1:50:30%:50:8.8847E-6:40:35:22:13:65 0/1:42:12:8:4:27:44.44%:42:5.0681E-5:48:15:7:8:32 0/1:49:14:9:5:45:31.11%:47:1.8462E-5:50:31:18:13:57 0/1:38:19:12:7:51:37.25%:66:2.4191E-7:43:32:20:12:57 0/1:37:20:13:7:50:40%:70:8.793E-8:43:30:21:9:56 0/0:35:4:3:1:23:17.39%:18:5.4264E-2:42:19:12:7:27 0/1:40:27:16:11:51:52.94%:99:6.451E-11:47:24:18:6:58 0/1:38:15:10:5:49:30.61%:50:8.6234E-6:44:34:14:20:55 0/1:37:16:11:5:47:34.04%:54:3.2755E-6:40:31:20:11:54 0/1:35:16:8:8:55:29.09%:53:4.2614E-6:44:39:27:12:64 0/1:37:16:11:5:45:35.56%:55:3.0122E-6:45:29:14:15:47 0/1:44:13:9:4:33:39.39%:45:2.8029E-5:56:20:14:6:41 0/1:49:9:7:2:29:31.03%:30:9.4048E-4:48:20:11:9:40 0/1:48:9:5:4:31:29.03%:30:9.9376E-4:48:22:11:11:39 0/1:37:27:21:6:59:45.76%:98:1.5211E-10:43:32:22:10:68 0/1:38:16:10:6:52:30.77%:54:3.905E-6:45:36:24:12:63 0/1:39:13:9:4:64:20.31%:42:6.2051E-5:53:51:35:16:81 0/1:42:19:13:6:51:37.25%:66:2.4191E-7:49:32:20:12:64 0/1:39:21:17:4:60:35%:72:5.6911E-8:46:39:21:18:69 0/1:38:17:11:6:60:28.33%:56:2.0389E-6:46:43:32:11:73 0/1:38:22:14:8:57:38.6%:77:1.9179E-8:45:35:21:14:65 0/1:36:19:6:13:44:43.18%:68:1.5811E-7:43:25:9:16:49 0/1:40:16:12:4:39:41.03%:56:2.1927E-6:44:23:14:9:45 0/1:39:28:23:5:62:45.16%:99:7.0184E-11:46:34:19:15:72 0/1:38:18:13:5:59:30.51%:60:8.2591E-7:44:41:28:13:72 0/1:40:22:16:6:54:40.74%:77:1.6045E-8:45:32:20:12:62 0/1:41:21:18:3:65:32.31%:71:6.9273E-8:43:44:28:16:73 0/1:39:23:13:10:57:40.35%:81:7.2965E-9:43:34:21:13:65 0/1:40:13:8:5:47:27.66%:43:4.6702E-5:51:34:17:17:58 0/1:49:12:10:2:21:57.14%:45:2.658E-5:53:9:7:2:27 0/1:40:37:24:13:68:54.41%:99:7.6926E-15:48:31:20:11:80 0/1:41:10:7:3:26:38.46%:34:3.3576E-4:48:16:10:6:29 0/1:41:18:13:5:42:42.86%:64:3.7193E-7:45:24:14:10:48 0/1:36:18:14:4:41:43.9%:64:3.454E-7:42:23:12:11:46 0/1:40:20:15:5:60:33.33%:68:1.4228E-7:46:40:24:16:70 0/1:40:19:14:5:48:39.58%:66:2.0555E-7:42:29:14:15:55 0/1:35:11:5:6:37:29.73%:36:2.0455E-4:46:26:17:9:44 0/1:39:24:18:6:55:43.64%:86:2.3553E-9:41:31:12:19:62 0/1:40:11:9:2:36:30.56%:37:1.9879E-4:48:25:12:13:43 0/1:42:12:10:2:33:36.36%:41:7.2075E-5:46:21:14:7:43 0/1:43:19:13:6:47:40.43%:67:1.9354E-7:45:28:14:14:57 0/1:44:25:19:6:53:47.17%:91:7.091E-10:40:28:16:12:67 0/1:43:9:5:4:22:40.91%:31:7.0165E-4:52:13:7:6:28 0/1:36:13:9:4:42:30.95%:43:4.0777E-5:52:29:16:13:52 0/1:44:22:16:6:65:33.85%:75:2.7963E-8:51:43:23:20:81 0/1:36:12:7:5:37:32.43%:40:8.4418E-5:47:25:18:7:48 0/1:44:13:11:2:36:36.11%:44:3.2589E-5:52:23:12:11:45 0/1:42:12:10:2:33:36.36%:41:7.2075E-5:53:21:14:7:41 0/0:42:4:2:2:26:15.38%:20:5.5222E-2:45:22:15:7:28 0/1:42:7:5:2:33:21.21%:22:5.4855E-3:51:26:17:9:42 0/1:40:18:15:3:40:45%:64:3.1919E-7:53:22:15:7:49 0/0:48:5:4:1:15:33.33%:6:2.1073E-2:45:10:4:6:17 0/1:43:19:14:5:48:39.58%:66:2.0555E-7:51:29:18:11:59 0/1:38:37:24:13:68:54.41%:99:7.6926E-15:41:31:19:12:76 0/1:39:25:13:12:50:50%:92:5.2124E-10:45:25:13:12:58 0/1:39:23:12:11:53:43.4%:82:5.5473E-9:44:30:16:14:57 0/1:42:7:7:0:31:22.58%:22:5.3469E-3:50:24:16:8:40 0/1:39:12:9:3:40:30%:40:9.2733E-5:47:28:20:8:48 0/1:37:10:9:1:39:25.64%:32:5.0524E-4:46:29:15:14:46 0/1:38:15:12:3:49:30.61%:50:8.6234E-6:47:34:21:13:58 0/1:37:34:23:11:77:44.16%:99:5.2028E-13:41:43:29:14:85 0/1:36:15:10:5:43:34.88%:51:6.9561E-6:43:28:22:6:51 0/1:40:17:11:6:34:50%:62:5.1914E-7:43:17:9:8:39 0/1:41:16:13:3:33:48.48%:58:1.364E-6:45:17:8:9:41 0/1:39:20:16:4:49:40.82%:70:8.2643E-8:43:29:14:15:61 0/1:43:10:8:2:34:29.41%:33:4.51E-4:46:24:14:10:43 0/0:37:4:3:1:21:19.05%:15:5.3471E-2:51:17:10:7:26 0/1:42:13:11:2:40:32.5%:44:3.8184E-5:51:27:20:7:50 0/1:38:11:7:4:22:50%:40:9.1981E-5:45:11:7:4:27 0/1:47:17:13:4:39:43.59%:60:8.1342E-7:48:22:12:10:49 0/1:42:7:6:1:28:25%:22:5.1054E-3:54:21:13:8:33 0/1:39:21:19:2:66:31.82%:71:7.1741E-8:46:45:29:16:88 0/1:45:10:8:2:35:28.57%:33:4.6276E-4:43:25:16:9:44 0/1:40:13:9:4:44:29.55%:43:4.324E-5:48:31:18:13:56 0/1:46:8:8:0:30:26.67%:26:2.2392E-3:46:21:12:9:38 0/1:37:14:12:2:30:46.67%:50:8.3837E-6:41:16:5:11:32 0/1:38:23:17:6:55:41.82%:81:6.4034E-9:46:32:21:11:64 0/1:39:11:7:4:33:33.33%:37:1.8019E-4:48:22:12:10:40 0/1:39:22:18:4:53:41.51%:78:1.5031E-8:43:31:20:11:63 0/1:42:20:15:5:48:41.67%:71:7.7415E-8:44:28:17:11:55 0/1:38:22:15:7:65:33.85%:75:2.7963E-8:46:43:29:14:75 0/1:41:13:10:3:31:41.94%:46:2.4825E-5:46:18:9:9:36 0/1:36:12:10:2:37:32.43%:40:8.4418E-5:40:25:13:12:42 0/1:41:9:7:2:25:36%:30:8.1542E-4:40:16:9:7:34 0/1:36:13:11:2:49:26.53%:43:4.8866E-5:48:36:20:16:60 0/1:37:21:10:11:49:42.86%:75:3.0726E-8:43:28:14:14:54 0/1:40:23:17:6:55:41.82%:81:6.4034E-9:50:32:18:14:69 0/1:39:15:13:2:51:29.41%:50:9.1412E-6:46:36:21:15:60 0/1:39:19:17:2:57:33.33%:65:3.1469E-7:43:38:26:12:67 0/1:39:15:9:6:52:28.85%:50:9.3931E-6:46:37:14:23:59 0/1:39:12:8:4:42:28.57%:40:9.7866E-5:40:30:21:9:50 0/0:39:4:4:0:22:18.18%:15:5.3885E-2:38:18:4:14:23 0/1:37:15:10:5:46:32.61%:51:7.8109E-6:45:31:17:14:53 0/1:41:15:12:3:40:37.5%:52:6.0618E-6:42:25:11:14:47 0/1:37:14:11:3:40:35%:48:1.5388E-5:45:26:15:11:48 0/1:37:11:8:3:36:30.56%:37:1.9879E-4:43:25:11:14:44 0/1:41:19:13:6:38:50%:70:9.2415E-8:44:19:9:10:44 0/1:42:12:10:2:31:38.71%:41:6.5329E-5:38:19:8:11:35 0/1:40:16:14:2:48:33.33%:54:3.4048E-6:46:32:12:20:54 0/1:42:24:18:6:66:36.36%:83:4.5894E-9:47:42:24:18:84 0/1:41:15:10:5:35:42.86%:53:4.5018E-6:44:20:7:13:40 0/1:38:7:6:1:34:20.59%:22:5.5492E-3:42:27:10:17:37 0/1:35:11:8:3:43:25.58%:36:2.3512E-4:44:32:20:12:53 0/1:36:15:11:4:48:31.25%:50:8.3573E-6:44:33:18:15:56 0/1:38:16:13:3:52:30.77%:54:3.905E-6:42:36:16:20:62 0/1:37:10:9:1:27:37.04%:34:3.5253E-4:41:17:7:10:29 0/1:35:15:10:5:58:25.86%:49:1.0808E-5:43:43:23:20:69 0/0:38:4:3:1:30:13.33%:26:5.62E-2:43:26:13:13:34 0/1:41:14:11:3:45:31.11%:47:1.8462E-5:41:31:13:18:56 0/0:36:4:3:1:23:17.39%:18:5.4264E-2:46:19:10:9:29 0/1:36:22:17:5:46:47.83%:80:8.5409E-9:43:24:8:16:52 0/1:39:15:12:3:46:32.61%:51:7.8109E-6:47:31:22:9:58 0/1:37:16:13:3:44:36.36%:55:2.8784E-6:44:28:12:16:52 0/1:39:10:7:3:30:33.33%:33:3.9851E-4:43:20:7:13:35 0/1:41:12:9:3:42:28.57%:40:9.7866E-5:44:30:14:16:52 0/1:37:27:20:7:64:42.19%:96:2.2534E-10:40:37:18:19:74 0/1:37:10:7:3:32:31.25%:33:4.259E-4:43:22:14:8:39 0/1:39:13:9:4:37:35.14%:44:3.404E-5:41:24:9:15:42 0/1:40:31:26:5:64:48.44%:99:3.6451E-12:41:33:16:17:77 0/1:39:18:12:6:51:35.29%:62:6.1577E-7:43:33:15:18:61 0/1:36:9:7:2:39:23.08%:29:1.162E-3:41:30:17:13:45 0/1:39:20:15:5:39:51.28%:74:3.4806E-8:49:19:10:9:47 0/1:42:13:9:4:40:32.5%:44:3.8184E-5:44:27:14:13:47 0/1:36:15:10:5:55:27.27%:49:1.0121E-5:40:40:27:13:69 0/1:41:16:9:7:26:61.54%:62:5.1256E-7:44:10:5:5:33 0/1:36:11:9:2:35:31.43%:37:1.9282E-4:46:24:13:11:39 0/1:42:25:20:5:63:39.68%:88:1.5062E-9:47:38:24:14:76 0/1:37:17:15:2:62:27.42%:56:2.1424E-6:44:45:17:28:67 0/1:38:16:13:3:48:33.33%:54:3.4048E-6:40:32:15:17:56 MTB_anc 3232759 . G A . PASS AC=150;AF=0.500;AN=300;ANN=A|intergenic_region|MODIFIER|amt_Rv2920c-ftsY_Rv2921c|gene2980-gene2981|intergenic_region|gene2980-gene2981|||n.3232759G>A||||||;HET=1;HOM=0;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:34:22:12:70:48.57%:99:2.7419E-13:40:36:20:16:92 0/1:42:8:5:3:16:50%:29:1.2236E-3:38:8:3:5:16 0/1:45:25:17:8:57:43.86%:90:9.9959E-10:46:32:21:11:77 0/1:39:11:8:3:21:52.38%:40:8.2399E-5:38:10:5:5:26 0/1:40:19:13:6:45:42.22%:67:1.6979E-7:39:26:11:15:57 0/1:44:19:11:8:29:65.52%:76:2.1144E-8:42:10:4:6:37 0/1:43:14:7:7:34:41.18%:49:1.1295E-5:49:20:11:9:41 0/1:42:11:7:4:25:44%:39:1.1933E-4:41:14:6:8:35 0/1:38:15:11:4:29:51.72%:55:2.6068E-6:48:14:5:9:33 0/1:38:15:10:5:31:48.39%:54:3.2298E-6:50:16:6:10:39 0/1:42:16:11:5:30:53.33%:60:9.7202E-7:45:14:9:5:38 0/1:42:18:15:3:47:38.3%:62:5.072E-7:42:29:16:13:58 0/1:38:10:7:3:22:45.45%:35:2.6061E-4:47:12:8:4:26 0/1:42:20:15:5:44:45.45%:72:5.7286E-8:42:24:10:14:61 0/1:41:20:14:6:29:68.97%:82:5.4216E-9:34:9:4:5:35 0/1:42:18:15:3:35:51.43%:67:1.9562E-7:41:17:9:8:44 0/1:46:9:7:2:22:40.91%:31:7.0165E-4:41:13:6:7:27 0/1:39:13:7:6:23:56.52%:49:1.1242E-5:54:10:8:2:28 0/1:39:11:6:5:18:61.11%:42:5.2969E-5:39:7:2:5:20 0/1:44:9:7:2:25:36%:30:8.1542E-4:46:16:10:6:32 0/1:44:17:8:9:38:44.74%:61:7.5297E-7:39:21:14:7:52 0/1:45:28:24:4:47:59.57%:99:1.0643E-11:45:19:11:8:64 0/1:40:15:9:6:28:53.57%:56:2.3037E-6:47:13:5:8:32 0/1:50:21:15:6:48:43.75%:75:2.8521E-8:45:27:16:11:64 0/1:40:33:21:12:58:56.9%:99:1.7621E-13:38:25:12:13:64 0/1:40:33:19:14:54:61.11%:99:8.4623E-14:42:21:17:4:62 0/1:43:13:10:3:24:54.17%:48:1.2938E-5:39:11:6:5:30 0/1:43:31:17:14:50:62%:99:4.5844E-13:43:19:13:6:59 0/1:41:28:16:12:52:53.85%:99:2.38E-11:40:24:11:13:58 0/1:39:30:20:10:49:61.22%:99:1.3155E-12:36:19:12:7:58 0/1:38:33:20:13:59:55.93%:99:2.068E-13:45:26:20:6:67 0/1:40:22:15:7:42:52.38%:82:5.4836E-9:39:20:10:10:47 0/1:46:18:10:8:31:58.06%:69:1.1154E-7:48:13:10:3:40 0/1:43:21:11:10:41:51.22%:78:1.4682E-8:40:20:8:12:48 0/1:44:13:5:8:25:52%:48:1.4654E-5:46:12:6:6:34 0/1:43:38:27:11:64:59.38%:99:1.2122E-15:43:26:19:7:79 0/1:40:24:14:10:53:45.28%:86:2.005E-9:42:29:17:12:66 0/1:39:25:18:7:61:40.98%:88:1.3291E-9:50:36:25:11:76 0/1:45:29:20:9:50:58%:99:5.4249E-12:48:21:15:6:66 0/1:42:28:21:7:54:51.85%:99:3.0926E-11:37:26:11:15:65 0/1:40:30:19:11:63:47.62%:99:9.545E-12:42:33:24:9:78 0/1:41:32:21:11:57:56.14%:99:4.883E-13:41:25:13:12:67 0/1:41:27:14:13:43:62.79%:99:1.6529E-11:43:16:6:10:51 0/1:39:30:19:11:48:62.5%:99:1.0643E-12:42:18:10:8:56 0/1:40:45:33:12:64:70.31%:99:1.0673E-19:42:19:9:10:77 0/1:37:29:18:11:51:56.86%:99:6.4161E-12:46:22:14:8:65 0/1:41:33:21:12:54:61.11%:99:8.4623E-14:41:21:13:8:62 0/1:41:37:25:12:66:56.06%:99:5.6872E-15:40:29:18:11:77 0/1:42:32:17:15:57:56.14%:99:4.883E-13:43:25:15:10:69 0/1:44:21:11:10:42:50%:77:1.6451E-8:51:21:10:11:59 0/1:52:15:13:2:21:71.43%:62:5.4994E-7:46:6:4:2:28 0/1:39:58:36:22:75:77.33%:99:9.1886E-27:48:16:12:4:88 0/1:39:19:11:8:28:67.86%:77:1.6265E-8:40:9:4:5:32 0/1:45:24:17:7:38:63.16%:95:2.5665E-10:40:14:7:7:49 0/1:38:33:25:8:45:73.33%:99:6.8121E-15:39:12:5:7:51 0/1:40:33:23:10:63:52.38%:99:3.6448E-13:47:30:17:13:74 0/1:40:29:20:9:47:61.7%:99:3.0639E-12:45:18:9:9:55 0/1:37:17:9:8:35:48.57%:62:5.7598E-7:38:18:12:6:47 0/1:41:38:24:14:59:64.41%:99:4.1471E-16:41:21:10:11:67 0/1:41:19:13:6:37:51.35%:70:8.2514E-8:43:18:9:9:45 0/1:45:17:12:5:33:51.52%:63:4.6376E-7:47:16:10:6:46 0/1:41:27:15:12:46:58.7%:99:2.9994E-11:43:19:6:13:56 0/1:49:31:22:9:54:57.41%:99:9.7868E-13:42:23:12:11:72 0/1:43:15:7:8:24:62.5%:59:1.196E-6:51:9:6:3:30 0/1:44:18:12:6:39:46.15%:65:2.9336E-7:49:21:14:7:52 0/1:46:34:22:12:69:49.28%:99:2.4655E-13:44:35:22:13:88 0/1:39:22:13:9:38:57.89%:85:3.0605E-9:43:16:12:4:50 0/1:46:27:19:8:43:62.79%:99:1.6529E-11:53:16:8:8:54 0/1:46:21:16:5:37:56.76%:80:8.5014E-9:45:16:10:6:46 0/1:39:9:4:5:22:40.91%:31:7.0165E-4:40:13:8:5:24 0/1:40:16:9:7:33:48.48%:58:1.364E-6:52:17:10:7:44 0/1:43:25:17:8:40:62.5%:99:1.1069E-10:58:15:10:5:49 0/1:50:10:6:4:16:62.5%:39:1.2413E-4:49:6:3:3:19 0/1:47:22:16:6:42:52.38%:82:5.4836E-9:48:20:13:7:55 0/1:42:49:31:18:72:68.06%:99:4.4084E-21:35:23:14:9:87 0/1:41:33:17:16:55:60%:99:1.0326E-13:40:22:13:9:65 0/1:41:32:16:16:50:64%:99:1.2624E-13:44:18:9:9:57 0/1:40:13:9:4:29:44.83%:46:2.1506E-5:50:16:10:6:38 0/1:43:28:18:10:47:59.57%:99:1.0643E-11:46:19:13:6:60 0/1:41:18:13:5:43:41.86%:63:3.9871E-7:38:25:11:14:52 0/1:40:27:19:8:51:52.94%:99:6.451E-11:43:24:14:10:62 0/1:39:59:35:24:84:70.24%:99:1.2213E-25:36:25:16:9:97 0/1:37:24:14:10:44:54.55%:91:7.4746E-10:46:20:16:4:53 0/1:44:24:17:7:33:72.73%:99:6.1763E-11:41:9:5:4:41 0/1:44:26:18:8:38:68.42%:99:1.7613E-11:43:12:5:7:49 0/1:41:31:22:9:51:60.78%:99:5.6397E-13:37:20:10:10:68 0/1:46:22:16:6:36:61.11%:86:2.1194E-9:46:14:9:5:50 0/1:52:9:6:3:21:42.86%:31:6.592E-4:42:12:7:5:30 0/1:45:21:15:6:42:50%:77:1.6451E-8:48:21:15:6:53 0/1:42:17:10:7:26:65.38%:68:1.4238E-7:38:9:7:2:33 0/1:49:24:16:8:42:57.14%:92:5.5097E-10:41:18:9:9:56 0/1:42:11:8:3:30:36.67%:37:1.594E-4:46:19:12:7:35 0/1:41:29:21:8:64:45.31%:99:2.9719E-11:40:35:21:14:91 0/1:44:19:12:7:35:54.29%:71:6.3952E-8:42:16:8:8:48 0/1:41:26:14:12:51:50.98%:97:1.9611E-10:44:25:13:12:63 0/1:46:13:12:1:29:44.83%:46:2.1506E-5:43:16:11:5:37 0/1:39:19:15:4:33:57.58%:73:4.7323E-8:41:14:3:11:38 0/1:41:39:30:9:59:66.1%:99:1.0886E-16:45:20:10:10:72 0/1:38:16:10:6:34:47.06%:58:1.4997E-6:39:18:9:9:42 0/1:39:43:30:13:63:68.25%:99:1.3554E-18:40:20:12:8:75 0/1:42:29:20:9:45:64.44%:99:1.9533E-12:41:16:9:7:56 0/1:37:42:28:14:72:58.33%:99:3.9989E-17:44:30:21:9:83 0/1:41:23:14:9:34:67.65%:94:3.5675E-10:35:11:6:5:42 0/1:35:19:11:8:38:50%:70:9.2415E-8:38:19:9:10:42 0/1:39:15:9:6:27:55.56%:56:2.0087E-6:41:12:6:6:39 0/1:43:26:21:5:51:50.98%:97:1.9611E-10:43:25:13:12:66 0/1:40:30:16:14:51:58.82%:99:1.9336E-12:44:21:11:10:57 0/1:42:37:25:12:62:59.68%:99:2.8393E-15:49:25:15:10:80 0/1:41:29:22:7:55:52.73%:99:1.1491E-11:41:26:16:10:68 0/1:42:35:23:12:57:61.4%:99:1.2682E-14:42:22:17:5:73 0/1:39:19:11:8:45:42.22%:67:1.6979E-7:42:26:11:15:56 0/1:42:25:16:9:48:52.08%:93:4.1182E-10:39:23:15:8:57 0/1:38:12:8:4:24:50%:44:3.8815E-5:37:12:2:10:27 0/1:44:20:14:6:43:46.51%:72:5.2508E-8:41:23:12:11:56 0/1:43:26:17:9:43:60.47%:99:5.8338E-11:40:17:5:12:54 0/1:39:29:21:8:48:60.42%:99:3.7531E-12:37:19:12:7:59 0/1:38:25:11:14:43:58.14%:97:1.977E-10:44:18:7:11:51 0/1:43:30:21:9:45:66.67%:99:5.1233E-13:41:15:6:9:55 0/1:43:17:11:6:29:58.62%:65:2.627E-7:35:12:6:6:34 0/1:43:35:27:8:56:62.5%:99:1.0233E-14:41:21:6:15:65 0/1:44:37:25:12:72:51.39%:99:1.3095E-14:45:35:19:16:96 0/1:41:27:16:11:41:65.85%:99:1.0249E-11:37:14:4:10:47 0/1:37:10:7:3:29:34.48%:34:3.8387E-4:38:19:5:14:32 0/1:37:34:18:16:54:62.96%:99:2.3694E-14:39:20:13:7:65 0/1:37:27:20:7:52:51.92%:99:7.3303E-11:41:25:11:14:59 0/1:38:31:20:11:54:57.41%:99:9.7868E-13:38:23:8:15:65 0/1:38:21:17:4:37:58.33%:81:7.2058E-9:36:15:3:12:40 0/1:38:30:13:17:58:51.72%:99:5.5047E-12:39:28:13:15:74 0/1:38:19:12:7:37:51.35%:70:8.2514E-8:39:18:8:10:42 0/1:39:31:20:11:51:60.78%:99:5.6397E-13:45:20:6:14:61 0/1:35:16:12:4:28:57.14%:61:7.3043E-7:46:12:7:5:34 0/1:38:29:22:7:45:64.44%:99:1.9533E-12:37:16:4:12:56 0/1:40:20:13:7:41:48.78%:73:4.3347E-8:50:21:13:8:53 0/1:37:34:19:15:48:70.83%:99:4.5188E-15:40:14:6:8:56 0/1:37:21:10:11:33:63.64%:83:3.9837E-9:38:12:3:9:36 0/1:40:24:16:8:41:58.54%:93:4.6506E-10:36:17:8:9:52 0/1:40:41:25:16:68:60.29%:99:6.4299E-17:36:27:12:15:83 0/1:40:24:16:8:37:64.86%:96:2.0323E-10:39:13:8:5:45 0/1:42:27:17:10:43:62.79%:99:1.6529E-11:40:16:6:10:50 0/1:44:39:31:8:60:65%:99:1.4114E-16:36:21:11:10:77 0/1:41:26:13:13:48:54.17%:98:1.3341E-10:42:22:9:13:58 0/1:38:20:12:8:36:55.56%:76:2.3419E-8:40:16:8:8:42 0/1:46:29:22:7:43:67.44%:99:1.1593E-12:42:14:5:9:51 0/1:43:25:17:8:39:64.1%:99:8.8326E-11:43:14:8:6:46 0/1:38:26:15:11:55:47.27%:95:2.9965E-10:40:29:18:11:73 0/1:44:21:12:9:29:72.41%:88:1.2841E-9:34:8:2:6:35 0/1:42:23:18:5:43:53.49%:86:2.0322E-9:39:20:9:11:50 0/1:40:38:27:11:66:57.58%:99:1.7361E-15:45:28:16:12:83 0/1:42:37:30:7:70:52.86%:99:1.0148E-14:41:33:12:21:81 0/1:36:31:20:11:50:62%:99:4.5844E-13:41:19:9:10:59 MTB_anc 3232815 . A G . PASS AC=72;AF=0.240;AN=300;ANN=G|intergenic_region|MODIFIER|amt_Rv2920c-ftsY_Rv2921c|gene2980-gene2981|intergenic_region|gene2980-gene2981|||n.3232815A>G||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:7:3:4:70:10%:21:6.675E-3:40:63:33:30:85 0/0:34:3:1:2:17:17.65%:14:1.1364E-1:44:14:9:5:18 0/1:38:12:6:6:60:20%:38:1.3273E-4:44:48:25:23:74 0/0:31:3:2:1:18:16.67%:14:1.1429E-1:39:15:9:6:23 0/0:41:6:1:5:39:15.38%:31:1.2702E-2:44:33:19:14:50 0/0:32:4:2:2:28:14.29%:23:5.5746E-2:46:24:11:13:36 0/1:45:7:0:7:31:22.58%:22:5.3469E-3:47:24:11:13:36 0/0:40:4:2:2:28:14.29%:23:5.5746E-2:39:24:12:12:34 0/1:42:8:2:6:34:23.53%:26:2.4562E-3:41:26:15:11:37 0/1:46:8:2:6:32:25%:26:2.3764E-3:44:24:12:12:38 0/0:43:3:2:1:26:11.54%:25:1.1765E-1:43:23:11:12:30 0/1:40:13:6:7:54:24.07%:42:5.3813E-5:40:41:24:17:64 0/0:34:4:2:2:21:19.05%:15:5.3471E-2:43:17:9:8:22 0/1:39:11:3:8:45:24.44%:36:2.4398E-4:41:34:17:17:54 0/0:36:3:0:3:31:9.68%:34:1.1885E-1:42:28:15:13:36 0/1:34:8:3:5:36:22.22%:25:2.5282E-3:42:28:22:6:44 0/0:37:4:2:2:23:17.39%:18:5.4264E-2:44:19:10:9:27 0/0:36:3:2:1:21:14.29%:19:1.1585E-1:42:18:10:8:25 0/0:34:5:1:4:22:22.73%:12:2.4248E-2:41:17:9:8:23 0/0:35:5:1:4:25:20%:17:2.5076E-2:41:20:11:9:28 0/1:39:11:5:6:39:28.21%:36:2.1547E-4:44:28:13:15:49 0/1:48:9:4:5:50:18%:28:1.3171E-3:45:41:31:10:67 0/1:36:7:2:5:32:21.88%:22:5.4182E-3:41:25:9:16:36 0/1:38:9:3:6:45:20%:29:1.2547E-3:45:36:19:17:60 0/1:42:10:6:4:55:18.18%:32:6.2367E-4:43:45:25:20:62 0/1:36:8:7:1:60:13.33%:25:3.045E-3:40:52:27:25:68 0/0:35:3:1:2:26:11.54%:25:1.1765E-1:39:23:15:8:31 0/0:35:3:2:1:50:6%:62:1.2121E-1:45:47:21:26:58 0/1:38:9:4:5:51:17.65%:28:1.3283E-3:42:42:20:22:58 0/0:0:0:0:0:53:0%:99:1E0:45:53:33:20:65 0/1:38:13:9:4:59:22.03%:42:5.818E-5:40:46:24:22:66 0/0:37:6:3:3:38:15.79%:28:1.2628E-2:43:32:21:11:44 0/0:46:5:3:2:35:14.29%:30:2.6822E-2:45:30:16:14:43 0/1:38:7:3:4:40:17.5%:22:5.8688E-3:41:33:15:18:47 0/0:35:3:1:2:26:11.54%:25:1.1765E-1:42:23:11:12:33 0/1:40:7:3:4:64:10.94%:21:6.5529E-3:42:56:30:26:78 0/1:40:11:5:6:52:21.15%:35:2.7081E-4:42:41:21:20:60 0/1:39:14:9:5:58:24.14%:46:2.5055E-5:39:44:23:21:71 0/1:41:11:6:5:54:20.37%:35:2.7747E-4:43:43:24:19:63 0/1:39:7:1:6:53:13.21%:21:6.3251E-3:44:46:28:18:62 0/1:34:11:5:6:51:21.57%:35:2.6733E-4:42:40:19:21:65 0/1:39:8:1:7:56:14.29%:25:2.9874E-3:42:48:26:22:64 0/1:39:8:3:5:44:18.18%:25:2.7573E-3:44:36:18:18:52 0/1:40:9:3:6:47:19.15%:28:1.2811E-3:42:38:22:16:56 0/0:35:4:1:3:69:5.8%:88:5.9773E-2:42:65:43:22:76 0/1:38:11:7:4:56:19.64%:35:2.8374E-4:39:45:25:20:65 0/1:40:7:4:3:58:12.07%:21:6.4484E-3:42:51:32:19:65 0/1:38:9:5:4:70:12.86%:28:1.4851E-3:42:61:37:24:78 0/1:41:10:3:7:64:15.62%:31:6.6774E-4:41:54:29:25:70 0/1:52:8:2:6:41:19.51%:25:2.6808E-3:46:33:14:19:54 0/0:50:3:2:1:24:12.5%:22:1.1702E-1:49:21:15:6:32 0/1:38:9:6:3:85:10.59%:28:1.5627E-3:42:76:45:31:96 0/0:36:5:1:4:33:15.15%:27:2.6557E-2:43:28:17:11:36 0/0:40:6:2:4:38:15.79%:28:1.2628E-2:47:32:26:6:49 0/0:35:4:2:2:42:9.52%:43:5.801E-2:41:38:25:13:51 0/1:43:9:3:6:67:13.43%:28:1.4657E-3:42:58:30:28:75 0/1:42:7:2:5:53:13.21%:21:6.3251E-3:41:46:27:19:62 0/0:42:6:2:4:33:18.18%:23:1.219E-2:43:27:13:14:46 0/1:36:9:3:6:56:16.07%:28:1.3788E-3:45:47:27:20:66 0/0:35:5:2:3:34:14.71%:27:2.6693E-2:45:29:17:12:45 0/1:35:9:3:6:32:28.12%:29:1.0185E-3:44:23:13:10:41 0/0:39:6:2:4:50:12%:44:1.3331E-2:44:44:18:26:58 0/1:39:10:7:3:55:18.18%:32:6.2367E-4:50:45:26:19:74 0/0:30:4:2:2:27:14.81%:23:5.5494E-2:43:23:13:10:33 0/0:34:5:2:3:38:13.16%:32:2.7169E-2:42:33:16:17:47 0/1:39:13:5:8:72:18.06%:41:6.7394E-5:44:59:30:29:92 0/0:40:6:4:2:39:15.38%:31:1.2702E-2:42:33:15:18:51 0/1:44:10:2:8:43:23.26%:32:5.3293E-4:51:32:20:12:56 0/0:41:6:2:4:42:14.29%:33:1.2905E-2:42:36:16:20:52 0/0:33:5:3:2:19:26.32%:10:2.3166E-2:39:14:6:8:22 0/0:46:5:1:4:37:13.51%:32:2.706E-2:45:32:14:18:43 0/0:41:4:1:3:43:9.3%:47:5.8115E-2:40:39:21:18:51 0/0:41:4:2:2:19:21.05%:13:5.251E-2:47:15:10:5:22 0/0:33:6:2:4:37:16.22%:28:1.2549E-2:43:31:17:14:52 0/0:0:0:0:0:81:0%:99:1E0:42:81:47:34:94 0/1:36:10:2:8:59:16.95%:31:6.4469E-4:44:49:22:27:64 0/1:41:8:4:4:52:15.38%:25:2.9216E-3:43:44:25:19:62 0/1:36:7:2:5:33:21.21%:22:5.4855E-3:40:26:15:11:39 0/0:39:6:4:2:50:12%:44:1.3331E-2:44:44:22:22:57 0/0:36:6:2:4:41:14.63%:33:1.2841E-2:42:35:17:18:50 0/1:36:8:4:4:48:16.67%:25:2.8457E-3:38:40:22:18:58 0/0:37:1:1:0:86:1.16%:99:5E-1:43:85:48:37:96 0/1:37:8:6:2:37:21.62%:25:2.5617E-3:43:29:15:14:46 0/0:42:3:1:2:36:8.33%:40:1.1972E-1:45:33:18:15:46 0/0:46:6:2:4:45:13.33%:39:1.3082E-2:42:39:23:16:54 0/0:34:4:3:1:52:7.69%:59:5.8877E-2:42:48:25:23:64 0/0:35:3:2:1:40:7.5%:46:1.2025E-1:43:37:22:15:50 0/0:43:6:2:4:23:26.09%:11:1.0777E-2:46:17:8:9:29 0/1:44:10:7:3:44:22.73%:32:5.4972E-4:45:34:17:17:51 0/0:32:4:4:0:28:14.29%:23:5.5746E-2:47:24:12:12:35 0/0:46:6:2:4:42:14.29%:33:1.2905E-2:47:36:22:14:54 0/1:40:7:2:5:24:29.17%:23:4.7006E-3:48:17:12:5:29 0/1:35:11:4:7:73:15.07%:34:3.2525E-4:40:62:29:33:91 0/1:38:7:3:4:35:20%:22:5.6095E-3:44:28:16:12:46 0/1:39:7:2:5:51:13.73%:22:6.2693E-3:43:44:23:21:58 0/0:35:4:2:2:23:17.39%:18:5.4264E-2:44:19:13:6:35 0/0:35:6:2:4:40:15%:30:1.2773E-2:40:34:20:14:45 0/1:40:8:0:8:59:13.56%:25:3.0313E-3:43:51:37:14:69 0/0:35:6:3:3:39:15.38%:31:1.2702E-2:38:33:14:19:47 0/1:37:9:4:5:64:14.06%:28:1.4447E-3:43:55:32:23:76 0/1:36:8:4:4:53:15.09%:25:2.9389E-3:45:45:29:16:64 0/1:40:11:8:3:68:16.18%:35:3.1486E-4:39:57:29:28:79 0/0:34:6:3:3:35:17.14%:25:1.238E-2:46:29:17:12:44 0/0:35:6:2:4:41:14.63%:33:1.2841E-2:41:35:17:18:42 0/0:33:1:0:1:31:3.23%:48:5E-1:39:30:15:15:36 0/1:43:11:5:6:53:20.75%:35:2.7419E-4:41:42:26:16:67 0/1:45:9:6:3:52:17.31%:28:1.3391E-3:41:43:19:24:59 0/1:43:13:6:7:63:20.63%:42:6.1313E-5:44:50:28:22:80 0/1:37:11:7:4:54:20.37%:35:2.7747E-4:41:43:27:16:66 0/1:34:13:9:4:64:20.31%:42:6.2051E-5:44:51:31:20:76 0/1:46:10:4:6:47:21.28%:32:5.7272E-4:41:37:17:20:55 0/0:36:3:2:1:40:7.5%:47:1.2013E-1:44:36:22:14:49 0/0:37:5:1:4:26:19.23%:17:2.531E-2:37:21:13:8:28 0/1:38:8:4:4:44:18.18%:25:2.7573E-3:43:36:21:15:54 0/0:42:3:1:2:48:6.25%:59:1.2105E-1:42:45:24:21:58 0/0:35:6:4:2:55:10.91%:53:1.3535E-2:40:49:29:20:69 0/0:37:4:0:4:42:9.52%:43:5.801E-2:39:38:15:23:49 0/0:42:5:3:2:43:11.63%:41:2.764E-2:48:38:29:9:54 0/0:36:6:3:3:27:22.22%:16:1.1461E-2:47:21:12:9:34 0/1:38:11:2:9:59:18.64%:35:2.925E-4:42:48:33:15:72 0/1:40:16:7:9:68:23.53%:52:5.6213E-6:44:52:29:23:90 0/0:34:4:2:2:40:10%:40:5.7784E-2:43:36:21:15:47 0/1:38:9:2:7:28:32.14%:30:9.1169E-4:40:19:9:10:33 0/0:40:6:3:3:62:9.68%:62:1.3767E-2:38:56:23:33:70 0/1:34:10:5:5:52:19.23%:32:6.0611E-4:38:42:22:20:57 0/0:39:6:0:6:54:11.11%:50:1.3497E-2:38:48:25:23:62 0/0:36:4:1:3:41:9.76%:44:5.79E-2:37:37:22:15:46 0/1:34:12:7:5:59:20.34%:38:1.3121E-4:39:47:17:30:71 0/0:36:4:0:4:41:9.76%:44:5.79E-2:40:37:24:13:45 0/0:43:5:1:4:47:10.64%:47:2.7945E-2:41:42:25:17:57 0/0:43:5:3:2:30:16.67%:21:2.6093E-2:36:25:16:9:32 0/0:0:0:0:0:57:0%:99:1E0:40:56:31:25:65 0/0:35:6:3:3:43:13.95%:36:1.2967E-2:39:37:22:15:48 0/0:0:0:0:0:58:0%:99:1E0:40:58:34:24:64 0/0:36:5:2:3:37:13.51%:32:2.706E-2:39:32:16:16:39 0/0:38:6:3:3:43:13.95%:36:1.2967E-2:40:37:22:15:50 0/1:35:8:3:5:72:11.11%:24:3.1815E-3:42:64:37:27:86 0/0:37:4:1:3:38:10.53%:37:5.7534E-2:40:34:22:12:44 0/0:38:4:2:2:40:10%:40:5.7784E-2:41:36:19:17:47 0/1:35:8:4:4:59:13.56%:25:3.0313E-3:48:51:37:14:78 0/0:41:6:3:3:50:12%:44:1.3331E-2:41:44:22:22:59 0/0:33:2:1:1:28:7.14%:34:2.4545E-1:40:26:14:12:36 0/0:45:3:0:3:42:7.14%:49:1.2048E-1:45:39:27:12:50 0/1:37:8:3:5:44:18.18%:25:2.7573E-3:46:36:23:13:55 0/1:35:13:10:3:57:22.81%:42:5.6497E-5:40:44:22:22:71 0/0:36:4:1:3:36:11.11%:34:5.7257E-2:43:32:18:14:41 0/1:37:7:3:4:48:14.58%:22:6.1774E-3:40:41:22:19:57 0/1:39:11:4:7:68:16.18%:35:3.1486E-4:42:57:33:24:85 0/1:39:10:3:7:64:15.62%:31:6.6774E-4:43:54:35:19:76 0/0:34:4:1:3:51:7.84%:59:5.8806E-2:38:47:22:25:59 MTB_anc 3238090 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|acyP_Rv2922A|gene2983|transcript|Transcript_gene2983|Coding|1/1|c.10C>T|p.Pro4Ser|10/282|10/282|4/93||,A|missense_variant|MODERATE|Rv2923c_Rv2923c|gene2984|transcript|Transcript_gene2984|Coding|1/1|c.410C>T|p.Ala137Val|410/414|410/414|137/137||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3238090G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3238090G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3238090G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:48:32:16:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:37:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:43:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:61:31:30:61:100%:99:2.609E-36:0:0:0:0:65 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 MTB_anc 3239470 . T TCCAGTGATGATCGCAAGCGCGGCGAAGCCGGGCGCAGCGGGTCATCACCATCGAA . PASS AC=3;AF=0.010;AN=300;ANN=TCCAGTGATGATCGCAAGCGCGGCGAAGCCGGGCGCAGCGGGTCATCACCATCGAA|intergenic_region|MODIFIER|fpg_Rv2924c-rnc_Rv2925c|gene2985-gene2986|intergenic_region|gene2985-gene2986|||n.3239470_3239471insCCAGTGATGATCGCAAGCGCGGCGAAGCCGGGCGCAGCGGGTCATCACCATCGAA||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:34:1:1:0:53:1.89%:88:5E-1:46:52:32:20:53 0/0:0:0:0:0:18:0%:32:1E0:45:18:4:14:18 0/0:37:1:0:1:50:2%:80:5E-1:46:49:23:26:51 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:18:9:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:22 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:32 0/0:37:1:0:1:28:3.57%:41:5E-1:48:27:17:10:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:41 0/0:0:0:0:0:14:0%:25:1E0:47:14:7:7:14 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:21 0/0:0:0:0:0:24:0%:44:1E0:49:24:11:13:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:7:19:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:37:1:0:1:20:5%:27:5E-1:50:19:9:10:20 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:43 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:41:0%:78:1E0:46:41:26:15:41 0/0:33:1:0:1:46:2.17%:73:5E-1:43:45:28:17:46 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:20 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:37 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:33 0/0:0:0:0:0:36:0%:66:1E0:49:36:18:18:37 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:26 0/0:0:0:0:0:31:0%:59:1E0:49:31:10:21:32 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:29:2:1:1:38:5.26%:50:2.4667E-1:43:36:18:18:39 0/0:34:1:0:1:63:1.59%:99:5E-1:46:62:38:24:65 0/0:0:0:0:0:42:0%:77:1E0:50:42:24:18:43 0/0:32:1:0:1:46:2.17%:73:5E-1:46:45:18:27:47 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:32:1:0:1:53:1.89%:88:5E-1:45:52:30:22:53 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:39:1:0:1:40:2.5%:62:5E-1:42:39:20:19:40 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:49 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:54:0%:99:1E0:42:54:30:24:57 0/0:0:0:0:0:34:0%:62:1E0:45:34:24:10:35 0/0:47:6:3:3:29:20.69%:16:1.1603E-2:46:22:9:13:29 0/0:37:1:0:1:46:2.17%:73:5E-1:44:45:24:21:47 0/0:0:0:0:0:16:0%:29:1E0:48:16:6:10:17 0/0:32:2:2:0:30:6.67%:37:2.4576E-1:46:28:7:21:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:34:1:0:1:42:2.38%:66:5E-1:42:41:23:18:42 0/0:60:1:1:0:41:2.44%:66:5E-1:46:40:23:17:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:30:13:45 0/0:33:1:1:0:43:2.33%:70:5E-1:45:42:30:12:43 0/0:60:1:0:1:29:3.45%:45:5E-1:48:28:15:13:29 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:37 0/0:37:1:0:1:40:2.5%:62:5E-1:44:39:21:18:42 0/1:46:8:4:4:30:26.67%:26:2.2875E-3:44:22:10:12:31 0/0:34:1:0:1:24:4.17%:34:5E-1:52:23:8:15:24 0/0:34:1:1:0:26:3.85%:38:5E-1:47:25:12:13:30 0/0:0:0:0:0:54:0%:99:1E0:50:54:26:28:54 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:40 0/0:0:0:0:0:45:0%:85:1E0:45:45:27:18:45 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:18 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:28:0%:51:1E0:51:28:15:13:28 0/0:0:0:0:0:7:0%:14:1E0:52:7:2:5:7 0/0:34:1:1:0:34:2.94%:51:5E-1:50:33:18:15:35 0/0:36:1:1:0:41:2.44%:62:5E-1:44:39:16:23:43 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:52:29:16:13:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:34 0/0:37:1:0:1:35:2.86%:55:5E-1:41:34:24:10:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:34:2:1:1:50:4%:70:2.4747E-1:44:48:27:21:53 0/0:33:1:1:0:39:2.56%:62:5E-1:45:38:20:18:42 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:39 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:48 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:33 0/0:34:1:1:0:17:5.88%:24:5E-1:46:16:10:6:18 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:28:0%:51:1E0:48:28:22:6:28 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:52 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:31 0/0:34:1:1:0:53:1.89%:88:5E-1:45:52:25:27:55 0/0:35:1:1:0:23:4.35%:34:5E-1:42:22:17:5:26 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:33 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:34:1:1:0:27:3.7%:41:5E-1:42:26:10:16:32 0/0:39:1:0:1:26:3.85%:38:5E-1:41:25:18:7:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:13:0%:25:1E0:44:13:5:8:14 0/0:34:1:1:0:47:2.13%:77:5E-1:45:46:23:23:48 0/0:34:1:1:0:23:4.35%:34:5E-1:43:22:10:12:23 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:37 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:33:1:1:0:29:3.45%:45:5E-1:42:28:24:4:29 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:39 0/1:38:8:4:4:42:18.6%:25:2.7329E-3:39:35:20:15:46 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:35 0/0:37:1:0:1:30:3.33%:44:5E-1:42:29:17:12:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:37:1:0:1:52:1.92%:83:5E-1:43:51:25:26:53 0/0:0:0:0:0:53:0%:99:1E0:41:53:27:26:54 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:38:38:20:18:41 0/0:35:2:1:1:43:4.65%:60:2.4706E-1:41:41:19:22:48 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:48 0/0:37:1:0:1:34:2.94%:51:5E-1:39:33:15:18:38 0/0:38:2:0:2:53:3.77%:78:2.4762E-1:42:51:21:30:56 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:41 0/0:34:1:1:0:45:2.22%:73:5E-1:42:44:27:17:46 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:41 0/0:34:1:1:0:43:2.33%:70:5E-1:41:42:20:22:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:38 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:22 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:34:1:1:0:57:1.75%:95:5E-1:38:56:27:29:63 0/0:60:1:1:0:30:3.33%:44:5E-1:38:29:15:14:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:34 0/0:33:1:1:0:36:2.78%:55:5E-1:41:34:17:17:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:34:1:1:0:17:5.88%:24:5E-1:43:16:7:9:17 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/1:43:9:6:3:37:24.32%:29:1.1256E-3:40:28:12:16:38 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:46 0/0:37:1:0:1:34:2.94%:51:5E-1:41:33:20:13:37 MTB_anc 3239562 . G GTCCCCCGCAAGCGGGAGGTGCCCC . PASS AC=1;AF=3.333e-03;AN=300;ANN=GTCCCCCGCAAGCGGGAGGTGCCCC|intergenic_region|MODIFIER|fpg_Rv2924c-rnc_Rv2925c|gene2985-gene2986|intergenic_region|gene2985-gene2986|||n.3239562_3239563insTCCCCCGCAAGCGGGAGGTGCCCC||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:61:0%:99:1E0:47:61:40:21:68 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:24 0/0:0:0:0:0:53:0%:99:1E0:46:53:32:21:59 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:26 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:44 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:28 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:24 0/0:0:0:0:0:45:0%:85:1E0:49:45:26:19:51 0/0:37:1:0:1:32:3.12%:48:5E-1:49:31:20:11:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:30:13:45 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:29 0/0:0:0:0:0:52:0%:96:1E0:44:52:29:23:56 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:36 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:40 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:30 0/0:32:1:1:0:50:2%:80:5E-1:42:49:21:28:55 0/0:0:0:0:0:54:0%:99:1E0:42:54:26:28:58 0/0:0:0:0:0:30:0%:55:1E0:47:30:22:8:32 0/0:0:0:0:0:47:0%:89:1E0:46:47:30:17:52 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:53 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:38 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:45 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:40 0/0:38:1:1:0:37:2.7%:59:5E-1:43:36:16:20:39 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:35 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:37:1:0:1:42:2.38%:66:5E-1:42:41:18:23:45 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:33 0/0:0:0:0:0:69:0%:99:1E0:47:69:46:23:83 0/0:0:0:0:0:42:0%:77:1E0:45:42:27:15:45 0/0:0:0:0:0:48:0%:89:1E0:46:48:24:24:55 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:42 0/0:0:0:0:0:56:0%:99:1E0:45:56:34:22:59 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:38 0/0:0:0:0:0:47:0%:89:1E0:43:47:30:17:53 0/0:60:1:1:0:50:2%:80:5E-1:44:49:29:20:53 0/0:35:1:1:0:38:2.63%:58:5E-1:43:37:23:14:39 0/0:0:0:0:0:40:0%:74:1E0:44:40:26:14:43 0/0:0:0:0:0:62:0%:99:1E0:43:62:40:22:71 0/0:0:0:0:0:49:0%:93:1E0:46:49:31:18:55 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:32 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:59 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:42 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:28 0/0:0:0:0:0:43:0%:82:1E0:44:43:28:15:48 0/0:0:0:0:0:57:0%:99:1E0:44:57:35:22:62 0/0:0:0:0:0:44:0%:81:1E0:42:44:29:15:45 0/0:0:0:0:0:56:0%:99:1E0:43:56:39:17:59 0/0:0:0:0:0:36:0%:66:1E0:51:36:20:16:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:29:14:46 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:44 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:32 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:48 0/0:0:0:0:0:61:0%:99:1E0:44:61:39:22:65 0/0:37:1:0:1:36:2.78%:55:5E-1:41:35:18:17:37 0/0:0:0:0:0:48:0%:89:1E0:47:48:33:15:54 0/0:0:0:0:0:16:0%:29:1E0:49:16:9:7:17 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:31:15:49 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:35 0/0:0:0:0:0:11:0%:22:1E0:45:11:7:4:11 0/0:0:0:0:0:43:0%:82:1E0:47:43:27:16:44 0/0:38:1:1:0:50:2%:80:5E-1:43:49:21:28:53 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:33 0/0:38:1:1:0:34:2.94%:51:5E-1:42:33:15:18:35 0/0:37:1:0:1:38:2.63%:58:5E-1:49:37:21:16:43 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:27:13:42 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:42 0/0:0:0:0:0:56:0%:99:1E0:44:56:32:24:62 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:44 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:45 0/0:33:1:0:1:47:2.13%:77:5E-1:41:46:30:16:51 0/0:0:0:0:0:53:0%:99:1E0:40:53:26:27:56 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:42 0/0:0:0:0:0:18:0%:32:1E0:46:18:13:5:18 0/0:60:1:1:0:43:2.33%:70:5E-1:47:42:24:18:48 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:40 0/0:34:1:1:0:29:3.45%:45:5E-1:50:28:22:6:33 0/0:0:0:0:0:50:0%:92:1E0:41:50:22:28:53 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:36 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:54 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:44 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 0/0:0:0:0:0:44:0%:81:1E0:46:44:25:19:50 0/0:34:1:1:0:24:4.17%:34:5E-1:46:23:13:10:28 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:45 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:35 0/0:34:1:1:0:36:2.78%:55:5E-1:43:35:22:13:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:28:6:40 0/0:36:1:1:0:28:3.57%:41:5E-1:41:27:15:12:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:33 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:53 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:50 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:26:14:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:33 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:48 0/0:0:0:0:0:53:0%:99:1E0:40:53:36:17:56 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:34:1:1:0:48:2.08%:76:5E-1:41:47:22:25:56 0/0:0:0:0:0:44:0%:81:1E0:38:44:17:27:44 0/0:0:0:0:0:55:0%:99:1E0:38:55:34:21:59 0/0:0:0:0:0:41:0%:78:1E0:37:41:20:21:44 0/0:0:0:0:0:62:0%:99:1E0:38:62:31:31:65 0/0:0:0:0:0:48:0%:89:1E0:41:48:31:17:51 0/0:38:1:1:0:41:2.44%:66:5E-1:40:40:27:13:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:46 0/0:0:0:0:0:48:0%:89:1E0:39:48:26:22:52 0/0:0:0:0:0:37:0%:70:1E0:38:37:21:16:40 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:46 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:32 0/0:0:0:0:0:29:0%:51:1E0:43:28:12:16:29 0/0:37:1:0:1:73:1.37%:99:5E-1:38:72:38:34:78 0/0:0:0:0:0:39:0%:74:1E0:44:39:26:13:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:34 0/1:43:9:4:5:27:33.33%:30:8.4928E-4:40:17:4:13:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:19:10:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:42 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:41 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:54 0/0:31:1:1:0:32:3.12%:48:5E-1:42:31:20:11:34 MTB_anc 3239564 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|intergenic_region|MODIFIER|fpg_Rv2924c-rnc_Rv2925c|gene2985-gene2986|intergenic_region|gene2985-gene2986|||n.3239564G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:60:0%:99:1E0:47:60:39:21:68 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:24 0/0:0:0:0:0:55:0%:99:1E0:46:55:33:22:61 0/0:29:1:1:0:24:4.17%:34:5E-1:43:22:13:9:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:44 0/0:37:1:0:1:27:3.7%:41:5E-1:41:26:16:10:28 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:29 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:24 0/0:0:0:0:0:44:0%:81:1E0:49:44:25:19:51 0/0:37:1:0:1:33:3.03%:52:5E-1:50:32:21:11:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:29:13:45 0/0:0:0:0:0:25:0%:48:1E0:52:25:12:13:29 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:55 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:36 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:22 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:40 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:30 0/0:38:1:1:0:50:2%:80:5E-1:42:49:21:28:55 0/0:0:0:0:0:54:0%:99:1E0:42:54:25:29:57 0/0:0:0:0:0:29:0%:55:1E0:46:29:22:7:32 0/0:0:0:0:0:45:0%:85:1E0:47:45:29:16:52 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:52 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:45 0/0:34:1:1:0:33:3.03%:52:5E-1:48:32:17:15:40 0/0:39:1:1:0:36:2.78%:55:5E-1:44:35:15:20:38 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:37:1:0:1:41:2.44%:66:5E-1:42:40:18:22:44 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:33 0/0:0:0:0:0:70:0%:99:1E0:47:70:47:23:82 0/0:0:0:0:0:40:0%:74:1E0:45:40:26:14:44 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:55 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:42 0/0:0:0:0:0:56:0%:99:1E0:44:56:34:22:59 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:41 0/0:0:0:0:0:47:0%:89:1E0:42:47:30:17:53 0/0:0:0:0:0:47:0%:89:1E0:46:47:28:19:53 0/0:38:1:1:0:36:2.78%:55:5E-1:44:35:22:13:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:42 0/0:0:0:0:0:58:0%:99:1E0:43:58:37:21:70 0/0:0:0:0:0:48:0%:89:1E0:47:48:31:17:56 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:31 0/0:37:1:1:0:51:1.96%:84:5E-1:42:50:27:23:59 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:43 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:29:15:48 0/0:0:0:0:0:57:0%:99:1E0:44:57:35:22:62 0/0:37:1:0:1:41:2.44%:66:5E-1:42:40:26:14:43 0/0:0:0:0:0:54:0%:99:1E0:43:54:38:16:59 0/0:0:0:0:0:35:0%:67:1E0:50:35:19:16:39 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:38 0/0:0:0:0:0:42:0%:77:1E0:43:42:28:14:46 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:44 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:32 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:47 0/0:0:0:0:0:60:0%:99:1E0:44:60:38:22:64 0/0:37:1:0:1:34:2.94%:51:5E-1:41:33:17:16:35 0/0:0:0:0:0:48:0%:89:1E0:46:48:33:15:55 0/0:0:0:0:0:16:0%:29:1E0:49:16:9:7:17 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:33 0/0:0:0:0:0:44:0%:81:1E0:42:44:29:15:49 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:35 0/0:0:0:0:0:11:0%:22:1E0:45:11:7:4:11 0/0:0:0:0:0:42:0%:77:1E0:48:42:26:16:44 0/0:37:1:1:0:48:2.08%:76:5E-1:42:47:20:27:53 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:32 0/0:39:1:1:0:33:3.03%:52:5E-1:42:32:15:17:36 0/0:38:1:1:0:38:2.63%:58:5E-1:48:37:20:17:43 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:26:11:42 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:41 0/0:0:0:0:0:57:0%:99:1E0:44:57:33:24:63 0/0:27:1:1:0:38:2.63%:58:5E-1:46:37:20:17:43 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:45 0/0:37:1:0:1:43:2.33%:70:5E-1:42:42:27:15:49 0/0:0:0:0:0:53:0%:99:1E0:40:53:26:27:57 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:42 0/0:0:0:0:0:18:0%:32:1E0:45:18:13:5:18 0/0:0:0:0:0:43:0%:82:1E0:47:43:25:18:48 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:40 0/0:34:1:1:0:29:3.45%:45:5E-1:50:28:22:6:33 0/0:37:1:0:1:49:2.04%:80:5E-1:42:48:22:26:53 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:36 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:54 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:45 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:39 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:43 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:16 0/0:0:0:0:0:43:0%:82:1E0:48:43:26:17:50 0/0:39:1:1:0:24:4.17%:34:5E-1:49:23:13:10:29 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:35 0/0:37:1:1:0:36:2.78%:55:5E-1:43:35:22:13:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:25:6:40 0/0:37:1:1:0:29:3.45%:45:5E-1:42:28:16:12:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:45:0%:85:1E0:42:45:27:18:53 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:50 0/0:0:0:0:0:37:0%:70:1E0:36:37:24:13:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:25:12:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:33 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:49 0/0:0:0:0:0:50:0%:92:1E0:41:50:35:15:56 0/0:39:1:1:0:30:3.33%:44:5E-1:39:29:14:15:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:36 0/0:38:1:1:0:45:2.22%:73:5E-1:42:44:20:24:56 0/0:0:0:0:0:41:0%:78:1E0:38:41:16:25:43 0/0:0:0:0:0:54:0%:99:1E0:38:54:32:22:60 0/0:0:0:0:0:38:0%:70:1E0:37:38:18:20:44 0/0:0:0:0:0:58:0%:99:1E0:38:58:28:30:64 0/0:0:0:0:0:48:0%:89:1E0:40:48:31:17:51 0/0:39:1:1:0:43:2.33%:70:5E-1:40:42:29:13:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:46 0/0:0:0:0:0:48:0%:89:1E0:39:48:27:21:52 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:39 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:47 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:32 0/0:39:1:1:0:29:3.57%:41:5E-1:43:27:11:16:29 0/0:37:1:0:1:73:1.37%:99:5E-1:39:72:37:35:78 0/0:37:1:1:0:38:2.63%:58:5E-1:45:37:24:13:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:34 0/1:47:9:4:5:21:42.86%:31:6.592E-4:42:12:2:10:22 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:38 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:40 0/0:39:1:1:0:52:1.92%:83:5E-1:43:51:29:22:55 0/0:37:1:1:0:32:3.12%:48:5E-1:41:30:19:11:34 MTB_anc 3239617 . GTCCCCCGCAAGCGGGAGGTGCCCC G . PASS AC=119;AF=0.397;AN=300;ANN=G|intergenic_region|MODIFIER|fpg_Rv2924c-rnc_Rv2925c|gene2985-gene2986|intergenic_region|gene2985-gene2986|||n.3239618_3239641delTCCCCCGCAAGCGGGAGGTGCCCC||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:24:12:12:61:38.71%:84:3.7283E-9:46:38:24:14:70 0/0:45:6:1:5:20:30%:7:1.0098E-2:44:14:9:5:23 0/1:42:13:7:6:50:25.49%:42:5.092E-5:47:38:22:16:59 0/1:42:8:4:4:28:29.63%:26:2.1337E-3:44:19:15:4:32 0/1:35:7:4:3:35:19.44%:22:5.6667E-3:44:29:17:12:39 0/0:0:0:0:0:25:0%:44:1E0:37:24:14:10:25 0/1:50:9:3:6:25:36%:30:8.1542E-4:48:16:10:6:29 0/1:41:8:5:3:21:38.1%:27:1.7241E-3:42:13:10:3:22 0/0:44:2:2:0:22:9.09%:24:2.4419E-1:49:20:11:9:24 0/1:40:20:8:12:43:44.44%:72:6.2178E-8:48:25:13:12:47 0/0:63:5:4:1:28:17.86%:19:2.5729E-2:41:23:13:10:32 0/1:49:10:5:5:36:27.78%:33:4.7404E-4:43:26:17:9:37 0/1:46:9:5:4:21:40.91%:31:7.0165E-4:54:13:7:6:24 0/1:50:13:5:8:41:31.71%:44:3.9497E-5:42:28:18:10:45 0/1:46:7:4:3:17:41.18%:24:3.6151E-3:44:10:6:4:19 0/1:47:14:5:9:36:38.89%:48:1.2704E-5:43:22:12:10:41 0/1:41:7:4:3:19:36.84%:23:3.9926E-3:40:12:6:6:19 0/1:41:9:3:6:34:25.71%:29:1.0857E-3:42:26:16:10:37 0/1:37:8:4:4:28:28.57%:26:2.188E-3:43:20:11:9:29 0/1:40:7:2:5:21:31.82%:23:4.4505E-3:45:15:9:6:23 0/1:39:16:7:9:45:34.04%:54:3.2755E-6:41:31:14:17:51 0/1:45:18:8:10:57:31.58%:61:7.7462E-7:42:39:23:16:65 0/1:48:7:5:2:23:29.17%:23:4.7006E-3:53:17:13:4:29 0/1:35:15:9:6:43:32.61%:51:7.8109E-6:49:31:19:12:50 0/1:47:12:11:1:40:30%:40:9.2733E-5:42:28:15:13:44 0/1:45:9:4:5:33:27.27%:29:1.042E-3:47:24:14:10:33 0/1:40:8:2:6:26:30.77%:26:2.076E-3:46:18:12:6:30 0/0:45:3:1:2:22:13.64%:19:1.1628E-1:44:19:9:10:24 0/1:44:12:8:4:39:30.77%:40:9.0046E-5:41:27:16:11:42 0/1:48:12:6:6:39:30.77%:40:9.0046E-5:44:27:15:12:44 0/1:46:13:6:7:34:38.24%:45:2.9583E-5:45:21:10:11:37 0/1:49:10:5:5:32:31.25%:33:4.259E-4:40:22:11:11:36 0/1:54:9:4:5:28:32.14%:30:9.1169E-4:45:19:11:8:31 0/1:37:7:3:4:25:28%:23:4.8126E-3:42:18:11:7:26 0/1:41:12:6:6:35:34.29%:41:7.8434E-5:40:23:14:9:36 0/1:40:12:4:8:37:31.58%:40:8.7276E-5:40:26:12:14:39 0/0:38:5:0:5:29:17.24%:22:2.5917E-2:40:24:12:12:30 0/1:45:21:12:9:60:33.87%:72:6.1853E-8:52:41:25:16:77 0/1:42:14:9:5:37:35.9%:48:1.407E-5:50:24:15:9:45 0/1:42:19:7:12:43:42.22%:67:1.6979E-7:41:26:14:12:48 0/1:42:13:6:7:29:41.94%:46:2.4825E-5:40:18:11:7:33 0/1:42:14:8:6:45:30.43%:47:1.9039E-5:45:32:18:14:50 0/0:43:6:3:3:23:26.09%:11:1.0777E-2:40:17:7:10:25 0/1:42:7:4:3:30:22.58%:22:5.3469E-3:41:24:10:14:33 0/1:48:11:7:4:39:28.21%:36:2.1547E-4:42:28:14:14:45 0/1:45:15:11:4:44:34.09%:51:7.2456E-6:42:29:15:14:49 0/1:38:10:8:2:29:33.33%:33:3.9851E-4:46:20:13:7:34 0/1:45:11:8:3:38:28.95%:36:2.1011E-4:43:27:17:10:40 0/1:47:14:7:7:55:25.45%:46:2.3698E-5:42:41:27:14:62 0/1:43:18:12:6:46:37.5%:62:5.3443E-7:45:30:14:16:53 0/0:38:1:0:1:25:4%:38:5E-1:51:24:13:11:29 0/1:42:12:4:8:50:23.53%:39:1.1751E-4:39:39:20:19:56 0/1:43:10:5:5:24:41.67%:35:2.9985E-4:41:14:8:6:25 0/1:49:11:3:8:35:31.43%:37:1.9282E-4:41:24:11:13:37 0/1:42:9:3:6:25:34.62%:30:8.4928E-4:41:17:10:7:28 0/1:42:9:6:3:41:21.43%:29:1.2112E-3:44:33:18:15:46 0/1:42:16:10:6:53:29.09%:53:4.2614E-6:42:39:27:12:59 0/1:42:12:7:5:34:36.36%:41:7.2075E-5:39:21:15:6:34 0/1:42:18:12:6:53:33.96%:61:6.6943E-7:40:35:22:13:56 0/1:50:9:5:4:34:26.47%:29:1.0644E-3:49:25:13:12:38 0/1:38:9:3:6:33:26.47%:29:1.0644E-3:46:25:19:6:38 0/1:39:14:9:5:35:40%:49:1.2005E-5:38:21:13:8:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:24:15:46 0/0:52:6:1:5:32:18.75%:20:1.2087E-2:43:26:14:12:33 0/1:40:15:6:9:37:37.5%:52:6.0618E-6:44:25:16:9:41 0/1:41:14:6:8:57:24.56%:46:2.4613E-5:43:43:28:15:62 0/1:40:12:6:6:28:42.86%:42:5.4482E-5:38:16:8:8:28 0/1:51:14:9:5:41:32.56%:47:1.727E-5:38:29:18:11:44 0/0:57:4:3:1:15:26.67%:8:4.9808E-2:48:11:4:7:17 0/0:39:4:1:3:25:15.38%:20:5.5222E-2:44:22:14:8:26 0/1:45:13:7:6:38:34.21%:44:3.5456E-5:47:25:16:9:44 0/0:40:6:3:3:25:24%:14:1.1145E-2:50:19:11:8:28 0/0:0:0:0:0:7:0%:14:1E0:52:7:7:0:9 0/1:49:10:6:4:39:25.64%:32:5.0524E-4:47:29:19:10:44 0/1:47:7:1:6:36:19.44%:22:5.6667E-3:38:29:11:18:36 0/0:31:6:2:4:21:26.09%:11:1.0777E-2:50:17:10:7:25 0/0:35:1:0:1:34:2.94%:51:5E-1:40:33:17:16:35 0/1:45:15:8:7:36:40.54%:53:4.8188E-6:51:21:12:9:42 0/1:37:9:2:7:31:28.12%:29:1.0185E-3:43:23:15:8:35 0/1:45:7:6:1:34:20.59%:22:5.5492E-3:41:27:14:13:36 0/1:42:8:3:5:34:23.53%:26:2.4562E-3:43:26:12:14:36 0/1:44:16:7:9:58:27.12%:53:4.7113E-6:43:43:27:16:65 0/1:41:16:6:10:35:43.24%:57:1.9143E-6:47:21:14:7:39 0/1:42:11:6:5:32:33.33%:37:1.8019E-4:40:22:10:12:33 0/1:44:15:11:4:39:38.46%:52:5.7558E-6:40:24:15:9:44 0/1:40:20:11:9:48:41.67%:71:7.7415E-8:39:28:10:18:52 0/1:45:13:3:10:33:39.39%:45:2.8029E-5:38:20:12:8:36 0/0:44:3:2:1:15:20%:11:1.1207E-1:54:12:9:3:19 0/1:46:12:7:5:36:33.33%:40:8.1472E-5:48:24:14:10:42 0/1:51:15:9:6:31:48.39%:54:3.2298E-6:43:16:10:6:35 0/1:48:14:8:6:35:40%:49:1.2005E-5:49:21:9:12:41 0/1:45:10:8:2:28:35.71%:34:3.6855E-4:47:18:12:6:32 0/1:38:17:9:8:47:36.96%:59:1.2413E-6:40:29:16:13:52 0/1:42:13:9:4:31:41.94%:46:2.4825E-5:42:18:12:6:34 0/1:40:19:8:11:49:37.25%:66:2.4191E-7:42:32:19:13:52 0/1:38:10:6:4:21:47.62%:36:2.3971E-4:38:11:7:4:21 0/1:31:11:6:5:29:35.48%:37:1.6659E-4:37:20:8:12:33 0/1:46:8:3:5:32:25%:26:2.3764E-3:38:24:16:8:33 0/1:47:12:8:4:30:40%:42:6.1809E-5:40:18:11:7:32 0/1:37:9:3:6:38:23.68%:29:1.1442E-3:41:29:12:17:40 0/0:41:6:3:3:30:20%:18:1.186E-2:42:24:15:9:31 0/1:40:9:3:6:29:30%:30:9.678E-4:44:21:13:8:33 0/1:38:11:9:2:38:28.21%:36:2.1547E-4:36:28:10:18:41 0/0:40:6:1:5:24:25%:11:1.0968E-2:39:18:7:11:27 0/0:42:3:0:3:16:18.75%:11:1.129E-1:39:13:6:7:16 0/1:44:16:9:7:42:37.21%:55:2.7433E-6:47:27:13:14:48 0/0:34:4:2:2:21:18.18%:15:5.3885E-2:48:18:11:7:26 0/1:43:12:4:8:46:26.09%:39:1.0724E-4:42:34:19:15:49 0/0:38:5:1:4:29:17.24%:22:2.5917E-2:42:24:17:7:33 0/0:47:6:3:3:26:23.08%:13:1.1309E-2:41:20:12:8:28 0/1:44:10:6:4:28:35.71%:34:3.6855E-4:41:18:12:6:32 0/1:49:11:8:3:26:42.31%:38:1.2791E-4:43:15:10:5:31 0/0:36:6:3:3:25:24%:14:1.1145E-2:37:19:9:10:26 0/1:39:8:4:4:31:25.81%:26:2.3332E-3:42:23:12:11:32 0/1:40:22:11:11:45:46.81%:80:9.3895E-9:38:25:13:12:53 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:35 0/1:33:7:6:1:30:23.33%:22:5.2713E-3:38:23:14:9:32 0/1:43:11:8:3:35:30.56%:37:1.9879E-4:44:25:17:8:43 0/1:39:13:4:9:27:46.43%:47:1.9812E-5:39:15:8:7:30 0/1:38:13:8:5:39:33.33%:44:3.6837E-5:40:26:16:10:42 0/1:37:19:11:8:43:42.22%:67:1.6979E-7:42:26:18:8:48 0/1:36:7:3:4:26:26.92%:23:4.9169E-3:41:19:11:8:29 0/1:46:8:2:6:21:38.1%:27:1.7241E-3:39:13:2:11:22 0/1:40:15:7:8:40:36.59%:51:6.364E-6:37:26:12:14:46 0/1:38:9:3:6:37:24.32%:29:1.1256E-3:37:28:11:17:37 0/1:43:12:8:4:43:27.91%:39:1.0032E-4:36:31:18:13:45 0/1:35:9:3:6:34:26.47%:29:1.0644E-3:36:25:13:12:35 0/1:37:18:6:12:49:36%:62:5.8874E-7:35:32:19:13:50 0/1:40:13:9:4:44:29.55%:43:4.324E-5:36:31:20:11:46 0/0:39:6:3:3:37:16.22%:28:1.2549E-2:38:31:18:13:40 0/1:36:10:6:4:28:34.48%:34:3.8387E-4:40:19:8:11:31 0/1:37:13:6:7:43:30.23%:43:4.2025E-5:41:30:20:10:46 0/1:43:14:9:5:30:46.67%:50:8.3837E-6:39:16:8:8:33 0/1:37:10:4:6:35:28.57%:33:4.6276E-4:39:25:9:16:38 0/1:43:7:4:3:33:21.21%:22:5.4855E-3:38:26:15:11:34 0/0:38:1:1:0:28:3.57%:41:5E-1:42:27:9:18:29 0/1:37:18:11:7:73:24.66%:59:1.1555E-6:37:55:22:33:74 0/1:41:8:7:1:35:22.86%:26:2.4931E-3:44:27:15:12:38 0/1:42:13:8:5:32:39.39%:45:2.8029E-5:44:20:10:10:37 0/1:37:11:3:8:35:30.56%:37:1.9879E-4:41:25:18:7:40 0/1:36:13:8:5:25:46.43%:47:1.9812E-5:46:15:9:6:30 0/0:43:4:1:3:25:16%:21:5.4928E-2:41:21:9:12:26 0/0:44:6:3:3:34:17.65%:23:1.2287E-2:39:28:20:8:35 0/1:45:10:5:5:31:32.26%:33:4.1251E-4:44:21:10:11:34 0/0:37:3:1:2:35:8.57%:40:1.1957E-1:42:32:18:14:39 0/1:42:14:4:10:26:50%:51:6.911E-6:46:14:7:7:32 0/1:38:16:6:10:33:45.71%:57:1.637E-6:43:19:13:6:36 0/1:53:9:6:3:37:24.32%:29:1.1256E-3:40:28:18:10:42 0/1:48:12:4:8:39:30.77%:40:9.0046E-5:40:27:15:12:43 0/0:37:6:3:3:30:19.35%:20:1.1977E-2:39:25:17:8:32 MTB_anc 3239643 . A G . PASS AC=112;AF=0.376;AN=298;ANN=G|intergenic_region|MODIFIER|fpg_Rv2924c-rnc_Rv2925c|gene2985-gene2986|intergenic_region|gene2985-gene2986|||n.3239643A>G||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:41:22:10:12:57:38.6%:77:1.9179E-8:49:35:20:15:71 0/1:45:6:1:5:19:31.58%:20:9.828E-3:53:13:10:3:23 0/1:44:11:5:6:46:23.91%:36:2.4819E-4:46:35:15:20:52 0/1:43:8:4:4:25:33.33%:27:1.949E-3:49:16:13:3:31 0/0:43:6:4:2:30:20%:18:1.186E-2:45:24:13:11:33 0/0:0:0:0:0:22:0%:40:1E0:44:21:13:8:25 0/1:50:9:3:6:27:33.33%:30:8.8132E-4:47:18:10:8:31 0/1:42:8:5:3:20:40%:27:1.638E-3:49:12:9:3:22 0/0:44:2:2:0:25:8%:31:2.449E-1:50:23:13:10:28 0/1:44:18:7:11:45:40%:63:4.5278E-7:51:27:12:15:51 0/0:60:4:3:1:30:13.33%:26:5.62E-2:41:26:13:13:32 0/1:49:10:5:5:32:31.25%:33:4.259E-4:43:22:12:10:32 0/1:50:7:4:3:19:36.84%:23:3.9926E-3:51:12:7:5:23 0/1:47:12:4:8:43:27.91%:39:1.0032E-4:41:31:15:16:44 0/1:42:6:3:3:16:37.5%:20:8.837E-3:42:10:6:4:19 0/1:41:13:4:9:36:36.11%:44:3.2589E-5:45:23:14:9:42 0/1:37:7:4:3:17:41.18%:24:3.6151E-3:45:10:8:2:19 0/1:46:8:3:5:26:30.77%:26:2.076E-3:44:18:11:7:30 0/1:38:7:4:3:24:29.17%:23:4.7006E-3:50:17:9:8:27 0/0:48:6:2:4:20:30%:7:1.0098E-2:43:14:9:5:21 0/1:39:13:5:8:39:33.33%:44:3.6837E-5:45:26:11:15:46 0/1:44:17:7:10:52:32.69%:57:1.5975E-6:48:35:20:15:62 0/0:49:6:4:2:26:23.08%:13:1.1309E-2:46:20:11:9:30 0/1:44:13:7:6:46:28.26%:43:4.4424E-5:45:32:16:16:50 0/1:46:8:7:1:38:21.62%:25:2.5617E-3:38:29:10:19:43 0/1:45:9:4:5:29:31.03%:30:9.4048E-4:46:20:12:8:29 0/1:41:8:2:6:24:33.33%:27:1.949E-3:47:16:10:6:27 0/0:46:3:1:2:18:16.67%:14:1.1429E-1:42:15:6:9:18 0/1:44:10:6:4:34:29.41%:33:4.51E-4:44:24:14:10:38 0/1:41:9:3:6:40:22.5%:29:1.1791E-3:40:31:16:15:45 0/1:44:11:5:6:39:28.21%:36:2.1547E-4:43:28:13:15:42 0/1:42:8:3:5:25:32%:26:2.0146E-3:38:17:6:11:27 0/1:52:8:3:5:24:33.33%:27:1.949E-3:46:16:9:7:28 0/1:38:7:3:4:23:30.43%:23:4.5803E-3:45:16:9:7:25 0/1:42:12:6:6:31:38.71%:41:6.5329E-5:47:19:14:5:36 0/1:45:11:4:7:33:33.33%:37:1.8019E-4:47:22:10:12:38 0/0:38:5:0:5:26:19.23%:17:2.531E-2:43:21:8:13:27 0/1:45:17:9:8:62:27.42%:56:2.1424E-6:47:45:21:24:76 0/1:51:11:8:3:41:26.83%:36:2.2563E-4:46:30:18:12:46 0/1:43:16:5:11:39:41.03%:56:2.1927E-6:40:23:10:13:44 0/1:47:11:5:6:28:39.29%:38:1.4422E-4:43:17:8:9:32 0/1:46:12:8:4:46:26.09%:39:1.0724E-4:45:34:17:17:51 0/0:35:6:3:3:23:26.09%:11:1.0777E-2:46:17:5:12:26 0/0:43:6:3:3:27:22.22%:16:1.1461E-2:41:21:9:12:30 0/1:40:9:4:5:39:23.08%:29:1.162E-3:43:30:11:19:46 0/1:38:13:9:4:43:30.23%:43:4.2025E-5:44:30:14:16:48 0/1:44:9:8:1:29:31.03%:30:9.4048E-4:48:20:12:8:34 0/1:44:10:7:3:38:26.32%:33:4.9525E-4:44:28:17:11:43 0/1:41:12:5:7:47:25.53%:39:1.0942E-4:41:35:15:20:52 0/1:46:14:9:5:40:35%:48:1.5388E-5:47:26:11:15:47 0/0:38:1:0:1:21:4.76%:31:5E-1:50:20:10:10:24 0/1:41:10:3:7:45:22.22%:32:5.5766E-4:42:35:17:18:50 0/1:40:9:4:5:21:42.86%:31:6.592E-4:42:12:6:6:22 0/1:46:10:2:8:36:27.78%:33:4.7404E-4:45:26:16:10:41 0/1:45:7:1:6:22:31.82%:23:4.4505E-3:38:15:6:9:24 0/1:42:8:5:3:40:20%:25:2.653E-3:45:32:14:18:47 0/1:47:14:9:5:46:30.43%:47:1.9039E-5:38:32:17:15:49 0/1:43:12:7:5:31:40%:42:6.1809E-5:43:18:10:8:33 0/1:42:16:11:5:49:32.65%:54:3.5325E-6:43:33:17:16:53 0/1:46:8:4:4:35:22.86%:26:2.4931E-3:46:27:13:14:40 0/1:43:9:3:6:33:27.27%:29:1.042E-3:42:24:15:9:35 0/1:39:14:9:5:35:40%:49:1.2005E-5:40:21:10:11:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:37 0/0:52:6:1:5:29:20.69%:18:1.1736E-2:48:23:12:11:32 0/1:46:12:3:9:33:36.36%:41:7.2075E-5:43:21:10:11:36 0/1:41:14:6:8:47:29.79%:47:1.9604E-5:49:33:20:13:54 0/1:40:12:6:6:23:52.17%:44:3.4748E-5:43:11:5:6:24 0/1:58:11:8:3:37:29.73%:36:2.0455E-4:42:26:12:14:42 0/0:53:3:2:1:14:21.43%:9:1.1111E-1:50:11:4:7:16 0/0:49:4:1:3:19:21.05%:13:5.251E-2:47:15:12:3:20 0/1:43:10:5:5:37:27.03%:33:4.8486E-4:47:27:12:15:43 0/0:44:4:1:3:19:21.05%:13:5.251E-2:51:15:10:5:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:49:10:6:4:33:30.3%:33:4.3872E-4:53:23:15:8:40 0/1:46:7:1:6:37:18.92%:22:5.721E-3:42:30:11:19:40 0/0:50:5:2:3:21:23.81%:12:2.3921E-2:51:16:7:9:25 0/0:38:1:0:1:37:2.7%:59:5E-1:41:36:21:15:38 0/1:45:14:7:7:38:36.84%:48:1.407E-5:47:24:12:12:43 0/1:39:8:1:7:34:23.53%:26:2.4562E-3:44:26:14:12:37 0/0:41:6:5:1:30:20%:18:1.186E-2:43:24:10:14:35 0/1:43:7:3:4:25:28%:23:4.8126E-3:47:18:9:9:28 0/1:48:13:6:7:50:26%:43:4.9906E-5:45:37:23:14:57 0/1:47:14:6:8:34:41.18%:49:1.1295E-5:43:20:9:11:38 0/1:47:10:5:5:26:38.46%:34:3.3576E-4:43:16:8:8:28 0/1:39:13:9:4:37:35.14%:44:3.404E-5:38:24:11:13:42 0/1:39:19:10:9:38:50%:70:9.2415E-8:44:19:5:14:43 0/1:43:12:2:10:33:36.36%:41:7.2075E-5:38:21:10:11:35 0/0:44:3:2:1:15:20%:11:1.1207E-1:51:12:8:4:19 0/1:43:11:6:5:34:32.35%:37:1.8662E-4:50:23:13:10:41 0/1:47:14:9:5:29:48.28%:51:7.6466E-6:48:15:8:7:34 0/1:45:13:7:6:36:36.11%:44:3.2589E-5:47:23:8:15:41 0/1:40:10:8:2:23:43.48%:35:2.8066E-4:46:13:8:5:26 0/1:37:16:8:8:44:37.21%:55:2.7433E-6:38:27:11:16:46 0/1:41:11:8:3:28:39.29%:38:1.4422E-4:41:17:7:10:31 0/1:44:17:8:9:53:32.08%:57:1.655E-6:40:36:19:17:55 0/1:39:10:6:4:24:41.67%:35:2.9985E-4:45:14:7:7:25 0/1:35:9:4:5:27:33.33%:30:8.8132E-4:43:18:6:12:31 0/1:45:7:2:5:29:24.14%:22:5.1909E-3:41:22:13:9:31 0/1:41:11:7:4:28:39.29%:38:1.4422E-4:42:17:8:9:32 0/1:38:9:3:6:34:26.47%:29:1.0644E-3:43:25:10:15:36 0/0:41:6:3:3:26:23.08%:13:1.1309E-2:43:20:13:7:27 0/1:43:8:2:6:27:29.63%:26:2.1337E-3:44:19:12:7:29 0/1:40:9:8:1:40:22.5%:29:1.1791E-3:37:31:11:20:44 0/0:35:6:1:5:24:25%:11:1.0968E-2:37:18:8:10:24 0/0:46:3:0:3:17:17.65%:14:1.1364E-1:39:14:7:7:18 0/1:45:15:8:7:39:38.46%:52:5.7558E-6:54:24:13:11:44 0/0:44:4:2:2:17:23.53%:11:5.132E-2:48:13:8:5:20 0/1:41:11:3:8:40:27.5%:36:2.2064E-4:45:29:17:12:45 0/0:39:5:1:4:27:18.52%:19:2.5527E-2:45:22:15:7:31 0/0:51:5:2:3:27:18.52%:19:2.5527E-2:39:22:12:10:30 0/1:40:9:5:4:29:31.03%:30:9.4048E-4:46:20:12:8:36 0/0:41:6:4:2:24:25%:11:1.0968E-2:38:18:5:13:29 0/0:38:6:3:3:21:28.57%:9:1.0344E-2:38:15:8:7:22 0/1:40:8:4:4:30:26.67%:26:2.2875E-3:40:22:11:11:31 0/1:40:18:9:9:43:41.86%:63:3.9871E-7:40:25:10:15:45 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:36 0/0:34:6:5:1:25:24%:14:1.1145E-2:42:19:13:6:30 0/1:41:9:7:2:42:21.43%:29:1.2112E-3:45:33:18:15:51 0/1:43:12:4:8:28:42.86%:42:5.4482E-5:40:16:7:9:32 0/1:39:13:8:5:45:28.89%:43:4.4424E-5:39:32:20:12:49 0/1:42:16:10:6:42:38.1%:55:2.607E-6:45:26:16:10:50 0/1:37:7:3:4:22:31.82%:23:4.4505E-3:42:15:9:6:26 0/1:46:7:1:6:22:31.82%:23:4.4505E-3:38:15:4:11:24 0/1:39:12:6:6:35:34.29%:41:7.8434E-5:38:23:10:13:40 0/1:37:8:2:6:33:24.24%:26:2.4173E-3:37:25:9:16:34 0/1:40:10:6:4:40:25%:32:5.1483E-4:37:30:15:15:44 0/1:36:9:3:6:32:28.12%:29:1.0185E-3:37:23:11:12:33 0/1:42:15:5:10:45:33.33%:51:7.5306E-6:37:30:17:13:46 0/1:41:12:9:3:41:29.27%:40:9.5339E-5:39:29:14:15:42 0/0:40:6:3:3:35:17.14%:25:1.238E-2:41:29:16:13:38 0/1:41:9:6:3:29:31.03%:30:9.4048E-4:38:20:6:14:30 0/1:38:12:5:7:39:30.77%:40:9.0046E-5:40:27:17:10:43 0/1:41:12:8:4:28:42.86%:42:5.4482E-5:40:16:7:9:31 0/1:37:10:4:6:32:31.25%:33:4.259E-4:37:22:7:15:35 0/1:43:7:4:3:30:23.33%:22:5.2713E-3:39:23:13:10:33 0/0:37:1:1:0:26:3.85%:38:5E-1:45:25:8:17:29 0/1:38:17:10:7:67:25.37%:56:2.3887E-6:40:50:20:30:72 0/0:36:6:5:1:35:17.14%:25:1.238E-2:44:29:14:15:39 0/1:40:10:6:4:30:33.33%:33:3.9851E-4:44:20:8:12:36 0/1:37:9:3:6:30:30%:30:9.678E-4:41:21:15:6:33 0/1:42:9:5:4:23:39.13%:31:7.4174E-4:40:14:8:6:31 0/0:42:4:1:3:19:21.05%:13:5.251E-2:43:15:6:9:21 0/0:43:5:3:2:33:15.15%:27:2.6557E-2:40:28:18:10:36 0/1:42:7:3:4:27:25.93%:22:5.0143E-3:44:20:9:11:31 0/0:37:3:1:2:28:10.71%:28:1.1818E-1:42:25:13:12:31 0/1:46:10:3:7:28:35.71%:34:3.6855E-4:46:18:8:10:33 0/1:45:15:6:9:31:48.39%:54:3.2298E-6:50:16:11:5:34 0/1:47:7:4:3:36:19.44%:22:5.6667E-3:45:29:18:11:43 0/1:45:10:3:7:38:26.32%:33:4.9525E-4:40:28:11:17:41 0/0:42:5:2:3:26:19.23%:17:2.531E-2:45:21:13:8:27 MTB_anc 3241798 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv2927c_Rv2927c|gene2988|transcript|Transcript_gene2988|Coding|1/1|c.162C>G|p.Asp54Glu|162/738|162/738|54/245||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3241798G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3241798G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:46 0/0:0:0:0:0:19:0%:37:1E0:53:19:9:10:20 0/0:0:0:0:0:47:0%:89:1E0:43:47:18:29:47 0/0:0:0:0:0:36:0%:66:1E0:47:36:13:23:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:5:22:28 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:19:0%:37:1E0:49:19:7:12:19 0/0:0:0:0:0:38:0%:70:1E0:48:38:15:23:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:45:0%:85:1E0:39:45:13:32:45 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:0:0:0:0:20:0%:36:1E0:43:20:5:15:21 0/0:0:0:0:0:20:0%:36:1E0:48:20:7:13:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:5:21:26 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:5:21:27 0/0:0:0:0:0:51:0%:97:1E0:41:51:21:30:51 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:8:19:27 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:19 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:29:0%:55:1E0:40:29:6:23:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:25 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:60:0%:99:1E0:45:60:24:36:62 0/0:0:0:0:0:47:0%:89:1E0:46:47:14:33:48 0/0:39:1:1:0:32:3.12%:48:5E-1:42:31:7:24:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:39:0%:74:1E0:40:39:12:27:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:6:16:22 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:0:0:0:0:18:0%:32:1E0:43:18:5:13:18 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:42:0%:77:1E0:43:42:14:28:43 0/0:0:0:0:0:37:0%:70:1E0:41:37:11:26:37 0/0:0:0:0:0:41:0%:78:1E0:48:41:18:23:42 0/0:0:0:0:0:17:0%:33:1E0:48:17:5:12:17 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:26 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:46 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:22 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:22:0%:40:1E0:38:22:5:17:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:8:17:25 0/0:0:0:0:0:36:0%:66:1E0:40:36:12:24:36 0/0:0:0:0:0:29:0%:55:1E0:49:29:10:19:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:10:25:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:33 0/0:0:0:0:0:49:0%:93:1E0:44:49:21:28:53 0/0:0:0:0:0:19:0%:37:1E0:43:19:1:18:19 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:47 0/0:0:0:0:0:9:0%:18:1E0:52:9:4:5:9 0/0:0:0:0:0:22:0%:40:1E0:49:22:7:15:22 0/0:0:0:0:0:37:0%:70:1E0:46:37:13:24:37 0/0:0:0:0:0:30:0%:55:1E0:51:30:10:20:30 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:33 0/0:0:0:0:0:35:0%:67:1E0:38:35:9:26:39 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:8:24:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:5:19:24 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:40 0/0:0:0:0:0:20:0%:36:1E0:41:20:6:14:20 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:7:19:27 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:34 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:11:27:39 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:36 0/0:0:0:0:0:45:0%:85:1E0:40:45:19:26:45 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:6:22:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:9:21:30 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:36 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:29 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:17 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:8:24:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:16 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:35 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:24 0/0:0:0:0:0:65:0%:99:1E0:42:65:32:33:66 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:53 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:50:0%:92:1E0:38:50:20:30:50 0/0:0:0:0:0:46:0%:85:1E0:40:46:17:29:48 0/0:0:0:0:0:51:0%:97:1E0:40:51:13:38:52 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:29 0/0:0:0:0:0:46:0%:85:1E0:38:46:17:29:46 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:37 0/0:60:1:1:0:32:3.12%:48:5E-1:43:31:13:18:33 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:30 0/0:0:0:0:0:37:0%:70:1E0:39:37:12:25:39 0/0:0:0:0:0:48:0%:89:1E0:41:48:14:34:48 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:44 0/0:0:0:0:0:47:0%:89:1E0:38:47:13:34:49 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:29 0/0:0:0:0:0:55:0%:99:1E0:37:55:25:30:55 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:34 0/0:0:0:0:0:24:0%:44:1E0:39:24:7:17:24 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:40 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:46 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:45:0%:85:1E0:43:45:14:31:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:38 0/0:0:0:0:0:52:0%:96:1E0:40:52:19:33:54 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 MTB_anc 3242169 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|intergenic_region|MODIFIER|Rv2927c_Rv2927c-tesA_Rv2928|gene2988-gene2989|intergenic_region|gene2988-gene2989|||n.3242169G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:45 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:27 0/0:0:0:0:0:62:0%:99:1E0:46:62:34:28:62 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:41 0/0:0:0:0:0:39:0%:74:1E0:51:39:17:22:39 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 0/0:0:0:0:0:22:0%:40:1E0:47:22:6:16:22 0/0:0:0:0:0:29:0%:55:1E0:50:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:48:34:15:19:35 0/0:0:0:0:0:49:0%:93:1E0:45:49:17:32:50 0/0:0:0:0:0:31:0%:59:1E0:50:31:11:20:31 0/0:0:0:0:0:56:0%:99:1E0:42:56:29:27:56 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:29 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:51:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:33:0%:63:1E0:50:33:17:16:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:18 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:27 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:31 0/0:0:0:0:0:52:0%:96:1E0:45:52:33:19:52 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:44 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:37 0/0:0:0:0:0:37:0%:70:1E0:46:37:12:25:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:17 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:34:0%:62:1E0:46:34:11:23:34 0/0:39:1:1:0:39:2.56%:62:5E-1:44:38:19:19:39 0/0:0:0:0:0:44:0%:81:1E0:48:44:22:22:44 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:37:0%:70:1E0:50:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:48:0%:89:1E0:44:48:22:26:48 0/0:0:0:0:0:39:0%:74:1E0:49:39:23:16:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:26:0%:47:1E0:50:26:12:14:27 0/0:38:1:0:1:42:2.38%:66:5E-1:47:41:18:23:42 0/0:0:0:0:0:54:0%:99:1E0:45:54:31:23:56 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:40 0/0:0:0:0:0:42:0%:77:1E0:48:42:22:20:42 0/0:60:1:1:0:24:4.17%:34:5E-1:47:23:12:11:24 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:60:1:0:1:30:3.33%:44:5E-1:48:29:15:14:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:39:1:1:0:39:2.56%:62:5E-1:43:38:19:19:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:36 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:20:10:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:38:1:0:1:30:3.33%:44:5E-1:54:29:18:11:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:41 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:48:0%:89:1E0:45:48:25:23:50 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:22 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:25 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:36 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:49 0/0:0:0:0:0:51:0%:97:1E0:42:51:22:29:52 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:44 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:70:0%:99:1E0:42:70:38:32:71 0/0:0:0:0:0:42:0%:77:1E0:43:42:27:15:42 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:23 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:31 0/0:0:0:0:0:53:0%:99:1E0:38:53:27:26:54 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:65:0%:99:1E0:44:65:31:34:66 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:40 0/0:0:0:0:0:58:0%:99:1E0:39:58:22:36:59 0/0:0:0:0:0:49:0%:93:1E0:42:49:29:20:50 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:40 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:50 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:27:13:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:33 0/0:0:0:0:0:57:0%:99:1E0:38:57:26:31:57 0/0:0:0:0:0:55:0%:99:1E0:43:55:26:29:55 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:16:7:24 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:36 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:48 0/0:0:0:0:0:43:0%:82:1E0:43:43:14:29:44 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:36 MTB_anc 3244414 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|fadD26_Rv2930|gene2991|transcript|Transcript_gene2991|Coding|1/1|c.718G>A|p.Val240Met|718/1752|718/1752|240/583||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3244414G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3244414G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:51:15:36:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:54:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:52:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:48:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:48:17:31:48:100%:99:1.554E-28:0:0:0:0:51 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:61:36:25:61:100%:99:2.609E-36:0:0:0:0:61 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:48:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:38:17:21:39:97.44%:99:1.4697E-21:60:1:1:0:39 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:54:18:36:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:60:30:30:60:100%:99:1.035E-35:0:0:0:0:62 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:46 MTB_anc 3247864 . C CTAGG . PASS AC=223;AF=0.743;AN=300;ANN=CTAGG|frameshift_variant|HIGH|ppsA_Rv2931|gene2992|transcript|Transcript_gene2992|Coding|1/1|c.2420_2421insTAGG|p.Gln808fs|2421/5631|2421/5631|807/1876||,CTAGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3247864_3247865insTAGG||||||,CTAGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3247864_3247865insTAGG||||||;LOF=(ppsA_Rv2931|gene2992|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:33:17:16:36:91.67%:99:2.0653E-17:44:3:2:1:36 0/1:49:20:9:11:23:86.96%:95:3.1579E-10:43:3:3:0:23 0/1:47:41:20:21:47:87.23%:99:1.4122E-20:43:6:4:2:47 1/1:47:24:8:16:26:92.31%:99:7.6222E-13:36:2:0:2:26 0/1:47:18:11:7:21:85.71%:84:3.7603E-9:45:3:2:1:21 0/1:48:20:9:11:23:86.96%:95:3.1579E-10:52:3:2:1:23 1/1:49:32:15:17:34:94.12%:99:2.2142E-17:46:2:1:1:34 1/1:43:18:9:9:19:90%:87:1.6758E-9:49:2:1:1:20 0/1:49:20:5:15:24:83.33%:91:6.3493E-10:42:4:1:3:24 1/1:49:27:13:14:30:90%:99:4.6134E-14:36:3:1:2:30 0/1:47:29:14:15:34:82.86%:99:4.008E-14:36:6:2:4:35 1/1:44:37:18:19:39:92.5%:99:1.1479E-19:43:3:1:2:40 1/1:50:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:45:33:11:22:40:80.49%:99:1.0617E-15:39:8:3:5:41 0/1:47:24:8:16:29:82.76%:99:9.2544E-12:41:5:2:3:29 0/1:48:25:13:12:27:89.29%:99:5.8768E-13:51:3:0:3:28 0/1:44:20:9:11:22:86.96%:95:3.1579E-10:45:3:1:2:23 0/1:41:22:13:9:25:88%:99:2.5916E-11:36:3:2:1:25 1/1:45:20:9:11:20:95.24%:99:4.0873E-11:60:1:1:0:21 0/1:46:19:9:10:22:86.36%:89:1.0931E-9:37:3:2:1:23 1/1:42:23:12:11:24:92%:99:2.7767E-12:38:2:1:1:26 0/1:45:37:18:19:41:88.1%:99:9.1365E-19:36:5:1:4:42 1/1:45:26:13:13:28:92.86%:99:5.6872E-14:33:2:2:0:29 0/1:43:31:15:16:35:88.57%:99:7.3316E-16:40:4:3:1:35 1/1:39:28:11:17:28:96.55%:99:9.9776E-16:27:1:1:0:29 1/1:48:21:10:11:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:40:21:10:11:19:95.45%:99:1.0931E-11:39:1:0:1:22 0/1:43:18:4:14:23:75%:77:1.8413E-8:48:6:2:4:24 0/1:49:15:7:8:21:71.43%:62:5.4994E-7:41:6:3:3:21 0/1:39:24:10:14:27:88.89%:99:2.0853E-12:36:3:2:1:28 0/1:47:26:8:18:29:89.66%:99:1.6496E-13:45:3:0:3:29 0/1:41:22:9:13:26:81.48%:99:1.0343E-10:41:5:2:3:27 0/1:48:31:17:14:36:86.11%:99:1.6935E-15:45:5:2:3:36 0/1:43:20:8:12:24:83.33%:91:6.3493E-10:39:4:2:2:24 0/1:49:32:14:18:36:88.89%:99:2.0653E-16:48:4:2:2:36 0/1:45:25:10:15:31:80.65%:99:4.9949E-12:43:6:3:3:32 1/1:45:22:8:14:23:95.65%:99:2.9149E-12:38:1:1:0:23 0/1:47:37:17:20:42:88.1%:99:9.1365E-19:46:5:3:2:42 0/1:50:34:15:19:42:80.95%:99:3.1978E-16:36:8:4:4:42 0/1:44:34:14:20:38:87.18%:99:3.9902E-17:41:5:1:4:39 1/1:45:38:14:24:38:97.44%:99:1.4697E-21:33:1:1:0:39 0/1:45:34:14:20:38:87.18%:99:3.9902E-17:35:5:4:1:39 0/1:47:19:13:6:23:82.61%:89:1.0931E-9:34:3:1:2:24 0/1:45:28:11:17:31:87.5%:99:3.2142E-14:36:4:3:1:33 1/1:45:26:8:18:28:92.86%:99:5.6872E-14:37:2:1:1:28 0/1:44:22:13:9:25:88%:99:2.5916E-11:43:3:1:2:25 0/1:47:15:5:10:18:83.33%:68:1.4655E-7:37:3:1:2:18 0/1:42:24:9:15:28:80%:99:9.2544E-12:42:5:4:1:31 0/1:45:23:12:11:28:82.14%:99:3.103E-11:35:5:1:4:28 0/1:45:29:14:15:31:87.88%:99:9.1482E-15:39:4:3:1:33 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:39:17:22:41:92.86%:99:8.4519E-21:52:3:2:1:42 0/1:48:23:11:12:26:88.46%:99:7.3681E-12:41:3:3:0:26 1/1:42:18:10:8:19:94.74%:92:5.6585E-10:38:1:0:1:19 0/1:47:26:11:15:30:86.67%:99:1.6496E-13:44:3:0:3:30 1/1:44:30:14:16:33:90.91%:99:9.89E-16:52:3:0:3:33 0/1:45:27:12:15:31:87.1%:99:1.125E-13:41:4:3:1:31 0/1:46:20:14:6:24:83.33%:91:6.3493E-10:48:4:2:2:24 0/1:46:26:10:16:29:89.66%:99:1.6496E-13:43:3:2:1:29 1/1:48:46:20:26:48:95.83%:99:2.9526E-26:60:1:0:1:48 1/1:44:26:7:19:28:92.86%:99:5.6872E-14:38:2:1:1:28 0/1:41:25:12:13:31:80.65%:99:2.745E-12:41:5:0:5:31 1/1:42:38:11:27:38:95%:99:8.0088E-21:35:2:0:2:40 0/1:45:29:18:11:35:82.86%:99:4.008E-14:40:6:2:4:35 1/1:48:37:16:21:39:97.37%:99:5.6582E-21:38:1:0:1:39 0/1:45:52:25:27:57:89.66%:99:4.1785E-27:40:5:4:1:58 0/1:45:25:13:12:28:89.29%:99:5.8768E-13:34:3:1:2:28 1/1:44:37:17:20:38:94.87%:99:3.0128E-20:49:2:2:0:39 1/1:51:16:7:9:17:94.12%:81:7.7134E-9:38:1:1:0:18 1/1:51:20:9:11:21:95.24%:99:4.0873E-11:60:1:1:0:21 0/1:46:27:12:15:31:87.1%:99:1.125E-13:41:4:3:1:31 0/1:46:27:15:12:35:75%:99:2.0026E-12:46:9:5:4:36 0/1:54:20:11:9:26:76.92%:89:1.1273E-9:41:5:3:2:26 1/1:46:26:15:11:27:96.3%:99:1.4382E-14:38:1:1:0:27 1/1:42:32:14:18:33:91.43%:99:7.5196E-17:36:3:1:2:36 0/1:44:16:8:8:19:84.21%:73:4.357E-8:37:3:2:1:19 0/1:51:12:6:6:15:80%:52:5.2605E-6:38:3:1:2:15 1/1:47:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:12:20:34:91.43%:99:7.5196E-17:44:3:3:0:35 0/1:47:16:8:8:20:80%:71:7.7086E-8:36:4:0:4:20 1/1:44:20:7:13:22:90.91%:98:1.3117E-10:35:2:0:2:22 0/1:47:28:14:14:32:87.5%:99:3.2142E-14:34:4:4:0:32 0/1:41:23:10:13:29:79.31%:99:5.3984E-11:39:6:2:4:29 1/1:45:31:16:15:34:91.18%:99:8.2416E-17:37:2:1:1:34 1/1:45:31:14:17:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:46:28:13:15:29:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:39:32:17:15:31:96.97%:99:4.7095E-18:37:1:1:0:33 0/1:49:17:10:7:19:89.47%:82:5.9414E-9:49:2:1:1:19 0/1:45:23:9:14:28:82.14%:99:3.103E-11:45:5:3:2:28 1/1:49:24:12:12:25:100%:99:3.101E-14:0:0:0:0:25 1/1:45:29:13:16:32:90.62%:99:3.5714E-15:45:3:1:2:32 1/1:55:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 0/1:43:35:13:22:42:83.33%:99:5.1164E-17:39:7:4:3:42 0/1:40:31:12:19:34:86.11%:99:1.6935E-15:39:5:2:3:36 1/1:42:34:15:19:35:97.14%:99:3.2089E-19:33:1:1:0:35 1/1:41:28:10:18:31:90.32%:99:1.2857E-14:43:3:1:2:31 0/1:43:23:11:12:25:88.46%:99:7.3681E-12:33:3:3:0:26 1/1:46:37:18:19:38:97.37%:99:5.6582E-21:37:1:0:1:38 1/1:45:27:13:14:30:90%:99:4.6134E-14:34:3:1:2:30 1/1:41:25:12:13:26:92.59%:99:5.4444E-14:37:1:0:1:27 0/1:47:26:12:14:32:81.25%:99:1.5064E-12:40:6:2:4:32 1/1:43:30:17:13:31:96.77%:99:6.8754E-17:39:1:0:1:31 0/1:42:17:14:3:20:80.95%:76:2.3502E-8:39:4:3:1:21 0/1:43:19:9:10:24:79.17%:84:3.6826E-9:40:5:2:3:25 1/1:42:21:13:8:23:91.3%:99:3.6437E-11:37:2:0:2:23 0/1:45:29:15:14:35:82.86%:99:4.008E-14:35:6:2:4:35 1/1:45:24:10:14:25:96%:99:2.0568E-13:38:1:0:1:25 1/1:44:25:10:15:27:92.59%:99:2.0853E-13:38:2:2:0:27 0/1:48:22:11:11:28:78.57%:97:1.7583E-10:34:6:2:4:28 0/1:41:39:22:17:45:86.67%:99:1.7346E-19:36:6:4:2:45 1/1:47:34:18:16:36:91.89%:99:5.6582E-18:35:3:1:2:37 0/1:45:17:6:11:20:85%:78:1.2848E-8:38:3:1:2:20 1/1:38:26:12:14:25:96.3%:99:1.4382E-14:26:1:1:0:27 0/1:47:33:17:16:40:82.5%:99:5.85E-16:40:7:2:5:40 1/1:44:31:9:22:32:91.18%:99:2.7308E-16:36:3:1:2:34 0/1:44:40:20:20:45:88.89%:99:2.0407E-20:36:5:2:3:46 1/1:42:33:15:18:36:91.67%:99:2.0653E-17:37:3:1:2:36 1/1:44:30:16:14:32:93.75%:99:3.0612E-16:38:2:1:1:33 1/1:40:24:11:13:25:92.31%:99:7.6222E-13:33:2:1:1:27 1/1:45:46:13:33:49:90.2%:99:9.5589E-24:36:5:1:4:51 1/1:41:51:23:28:55:92.73%:99:1.1771E-27:34:3:1:2:55 1/1:38:27:11:16:27:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:43:19:6:13:20:90.48%:93:4.7003E-10:37:2:0:2:21 1/1:39:41:23:18:40:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:31:17:14:31:96.88%:99:1.8007E-17:31:1:1:0:33 0/1:37:43:18:25:45:89.58%:99:4.4594E-22:37:5:2:3:48 0/1:40:20:15:5:28:71.43%:84:3.9563E-9:36:8:2:6:28 1/1:44:31:18:13:32:96.88%:99:1.8007E-17:38:1:0:1:32 1/1:41:31:18:13:32:91.18%:99:2.7308E-16:34:3:2:1:34 0/1:42:44:21:23:49:88%:99:3.2182E-22:34:6:4:2:51 0/1:45:30:17:13:34:88.24%:99:2.5943E-15:35:4:1:3:34 1/1:47:28:11:17:31:90.32%:99:1.2857E-14:33:3:2:1:32 1/1:43:26:17:9:27:92.86%:99:5.6872E-14:34:2:1:1:28 0/1:44:26:11:15:30:86.67%:99:3.9214E-13:42:4:1:3:31 1/1:44:27:14:13:29:90%:99:4.6134E-14:36:3:0:3:31 0/1:38:21:12:9:27:72.41%:88:1.2841E-9:39:8:4:4:29 1/1:40:42:23:19:45:91.3%:99:5.6062E-22:34:4:2:2:47 1/1:40:33:18:15:35:94.29%:99:5.9366E-18:33:2:1:1:35 1/1:46:31:16:15:33:91.18%:99:2.7308E-16:37:3:2:1:34 0/1:42:33:15:18:41:80.49%:99:1.0617E-15:40:8:6:2:41 0/1:50:34:17:17:38:89.47%:99:1.6239E-17:37:4:3:1:38 1/1:44:16:3:13:17:94.12%:81:7.7134E-9:37:1:0:1:17 1/1:46:27:14:13:30:90%:99:4.6134E-14:36:3:2:1:30 0/1:42:34:14:20:39:87.18%:99:3.9902E-17:36:5:1:4:39 1/1:45:29:9:20:32:90.62%:99:3.5714E-15:34:3:3:0:32 1/1:40:15:6:9:15:93.75%:75:2.8282E-8:34:1:0:1:16 0/1:45:27:18:9:31:87.1%:99:4.6134E-14:38:3:2:1:31 1/1:44:40:21:19:44:90.91%:99:7.413E-21:43:4:1:3:45 0/1:40:40:19:21:44:88.89%:99:2.287E-21:36:3:3:0:45 0/1:38:25:11:14:30:78.12%:99:8.3928E-12:39:7:3:4:33 MTB_anc 3247865 . GCAAA G . PASS AC=300;AF=1.00;AN=300;ANN=G|frameshift_variant|HIGH|ppsA_Rv2931|gene2992|transcript|Transcript_gene2992|Coding|1/1|c.2422_2425delCAAA|p.Gln808fs|2422/5631|2422/5631|808/1876||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3247866_3247869delCAAA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3247866_3247869delCAAA||||||;HET=0;HOM=1;LOF=(ppsA_Rv2931|gene2992|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:41:20:21:41:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:46:24:8:16:25:96%:99:3.101E-14:0:0:0:0:25 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:18:9:9:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:20:5:15:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:18:19:35:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:17:3:14:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:24:8:16:23:100%:99:3.101E-14:0:0:0:0:24 1/1:47:25:13:12:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:13:9:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:9:10:21:90.48%:99:2.8292E-11:0:0:0:0:21 1/1:42:23:12:11:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:37:18:19:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:28:11:17:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:24:10:14:25:96%:99:3.101E-14:0:0:0:0:25 1/1:48:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:20:8:12:18:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:32:14:18:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:37:17:20:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:14:20:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:45:38:14:24:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:46:34:14:20:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:20:13:7:21:95.24%:99:4.0873E-11:38:1:0:1:21 1/1:46:28:11:17:29:93.33%:99:1.3074E-16:0:0:0:0:30 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:22:13:9:22:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:48:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:25:10:15:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:39:17:22:40:97.5%:99:3.8137E-22:60:1:0:1:40 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:18:10:8:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:27:12:15:27:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:12:15:27:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:47:20:14:6:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:47:20:27:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:11:27:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:16:21:38:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:52:25:27:53:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:54:20:11:9:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:14:18:34:94.12%:99:5.4567E-19:0:0:0:0:34 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:15:17:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:13:15:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:23:9:14:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:24:12:12:25:100%:99:3.101E-14:0:0:0:0:25 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:55:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:35:13:22:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:31:12:19:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:10:18:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:37:18:19:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:17:14:3:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:21:13:8:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:10:15:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:22:17:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:34:18:16:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:33:15:18:30:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:16:14:30:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:40:24:11:13:23:100%:99:3.101E-14:0:0:0:0:24 1/1:45:46:13:33:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:52:23:29:51:100%:99:6.3169E-31:0:0:0:0:52 1/1:38:27:11:16:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:19:6:13:17:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:43:18:25:41:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:31:18:13:29:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:18:13:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:42:44:21:23:41:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:30:17:13:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:11:15:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:14:13:26:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:40:21:12:9:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:33:18:15:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:15:18:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:14:20:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:9:20:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:25:11:14:24:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 3247874 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|ppsA_Rv2931|gene2992|transcript|Transcript_gene2992|Coding|1/1|c.2430G>A|p.Arg810Arg|2430/5631|2430/5631|810/1876||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3247874G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3247874G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:20:12:8:21:95.24%:99:4.0873E-11:38:1:0:1:22 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:39:18:21:40:97.5%:99:3.8137E-22:60:1:0:1:41 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:45:27:12:15:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:53:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:47:14:33:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 MTB_anc 3248301 . A ACC . PASS AC=4;AF=0.016;AN=258;ANN=ACC|frameshift_variant|HIGH|ppsA_Rv2931|gene2992|transcript|Transcript_gene2992|Coding|1/1|c.2862_2863dupCC|p.His955fs|2864/5631|2864/5631|955/1876||INFO_REALIGN_3_PRIME,ACC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3248301_3248302insCC||||||,ACC|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3248301_3248302insCC||||||;HOM=0;LOF=(ppsA_Rv2931|gene2992|1|1.00);set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:1:1:0:16:6.25%:21:5E-1:33:15:11:4:27 0/0:0:0:0:0:9:0%:18:1E0:38:9:6:3:15 0/0:0:0:0:0:24:0%:44:1E0:33:24:16:8:51 0/0:0:0:0:0:15:0%:29:1E0:31:15:9:6:28 0/0:0:0:0:0:13:0%:25:1E0:38:13:8:5:22 0/0:0:0:0:0:10:0%:17:1E0:36:10:7:3:13 0/0:28:1:0:1:21:4.76%:31:5E-1:39:20:8:12:35 0/0:0:0:0:0:8:0%:14:1E0:32:8:6:2:13 0/0:23:4:4:0:10:33.33%:4:4.5113E-2:32:7:1:6:19 0/0:0:0:0:0:11:0%:22:1E0:33:11:8:3:23 0/0:0:0:0:0:12:0%:21:1E0:30:12:5:7:27 0/0:30:2:1:1:13:14.29%:13:2.4E-1:29:11:7:4:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:1:0:10:10%:11:5E-1:32:9:6:3:22 0/0:0:0:0:0:10:0%:17:1E0:36:10:8:2:13 0/0:0:0:0:0:11:0%:22:1E0:34:11:8:3:19 0/0:0:0:0:0:15:0%:29:1E0:31:15:9:6:28 0/0:0:0:0:0:9:0%:18:1E0:34:9:7:2:15 0/0:0:0:0:0:10:0%:17:1E0:33:10:5:5:15 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:17 0/0:0:0:0:0:8:0%:14:1E0:37:8:5:3:17 0/0:0:0:0:0:8:0%:14:1E0:29:8:5:3:19 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:20 0/0:24:1:0:1:21:4.76%:27:5E-1:33:19:10:9:33 0/0:33:5:4:1:13:33.33%:4:2.037E-2:33:9:5:4:23 0/0:0:0:0:0:17:0%:33:1E0:35:17:10:7:28 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:18 0/0:0:0:0:0:12:0%:21:1E0:39:12:8:4:21 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:14 0/0:0:0:0:0:14:0%:25:1E0:33:14:11:3:19 0/0:0:0:0:0:11:0%:22:1E0:37:11:9:2:12 0/0:0:0:0:0:7:0%:14:1E0:33:7:4:3:11 0/0:27:1:1:0:16:6.25%:21:5E-1:33:14:10:4:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:2:2:0:22:9.09%:25:2.439E-1:33:19:10:9:32 0/0:36:3:3:0:16:18.75%:11:1.1207E-1:31:12:7:5:22 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:14 0/0:28:1:1:0:42:2.38%:62:5E-1:33:39:26:13:61 0/0:0:0:0:0:17:0%:33:1E0:32:17:7:10:32 0/0:0:0:0:0:12:0%:21:1E0:31:12:7:5:18 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:16 0/0:0:0:0:0:12:0%:21:1E0:38:12:7:5:16 0/0:0:0:0:0:10:0%:17:1E0:41:10:7:3:18 0/0:32:1:1:0:10:10%:11:5E-1:34:9:7:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:32:8:3:5:10 0/0:40:2:1:1:11:18.18%:10:2.381E-1:33:9:5:4:14 0/1:24:7:5:2:15:35%:23:3.9926E-3:36:12:6:6:32 0/0:0:0:0:0:13:0%:25:1E0:33:13:11:2:20 0/0:30:1:0:1:28:3.57%:41:5E-1:33:27:21:6:36 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:19 0/0:0:0:0:0:11:0%:22:1E0:32:11:9:2:23 0/0:0:0:0:0:12:0%:21:1E0:29:12:6:6:17 0/0:38:1:1:0:11:9.09%:14:5E-1:36:10:4:6:18 0/0:0:0:0:0:8:0%:14:1E0:34:8:6:2:11 0/0:0:0:0:0:10:0%:17:1E0:31:10:7:3:13 0/0:0:0:0:0:7:0%:14:1E0:29:7:3:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:29:8:2:6:13 0/0:50:1:0:1:18:5.56%:24:5E-1:34:16:10:6:36 0/0:0:0:0:0:10:0%:17:1E0:32:10:8:2:17 0/0:0:0:0:0:13:0%:25:1E0:32:13:6:7:20 0/0:0:0:0:0:10:0%:17:1E0:34:10:5:5:18 0/0:0:0:0:0:11:0%:22:1E0:31:11:7:4:22 0/0:36:1:1:0:14:7.14%:17:5E-1:31:13:7:6:26 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:41 0/0:0:0:0:0:9:0%:18:1E0:36:9:5:4:10 0/0:0:0:0:0:15:0%:29:1E0:33:15:10:5:27 0/0:0:0:0:0:8:0%:14:1E0:39:8:6:2:17 0/0:33:1:1:0:13:7.69%:18:5E-1:35:12:8:4:20 0/0:27:1:1:0:21:4.76%:31:5E-1:31:20:13:7:32 0/0:23:2:2:0:18:10.53%:15:2.4194E-1:32:14:8:6:32 0/0:38:1:1:0:9:11.11%:11:5E-1:32:8:5:3:16 0/0:30:1:0:1:19:5.26%:28:5E-1:34:18:13:5:39 0/0:34:1:1:0:14:7.14%:18:5E-1:38:12:7:5:20 0/0:0:0:0:0:12:0%:21:1E0:33:12:6:6:20 0/0:31:1:0:1:10:10%:11:5E-1:35:9:5:4:15 0/0:25:2:0:2:24:8.33%:27:2.4468E-1:32:22:16:6:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:33:10:5:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:38:10:7:3:19 0/0:0:0:0:0:16:0%:29:1E0:32:16:12:4:22 0/0:0:0:0:0:9:0%:18:1E0:34:9:5:4:18 0/0:0:0:0:0:10:0%:17:1E0:34:10:8:2:19 0/0:0:0:0:0:16:0%:29:1E0:34:16:9:7:22 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:18 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:34 0/0:32:1:1:0:21:4.76%:31:5E-1:36:20:15:5:33 0/1:27:9:6:3:21:39.13%:31:7.0165E-4:36:13:7:6:35 0/1:27:7:4:3:17:36.84%:24:3.8123E-3:34:11:8:3:27 0/0:0:0:0:0:18:0%:32:1E0:32:18:14:4:23 0/0:26:1:0:1:13:7.69%:18:5E-1:34:12:9:3:22 0/0:0:0:0:0:28:0%:51:1E0:33:28:18:10:38 0/0:26:1:0:1:20:5%:27:5E-1:34:19:15:4:24 0/0:0:0:0:0:8:0%:14:1E0:29:8:5:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:1:1:0:9:11.11%:11:5E-1:34:8:5:3:21 0/0:26:1:0:1:11:9.09%:14:5E-1:32:10:6:4:19 0/0:0:0:0:0:11:0%:22:1E0:33:11:7:4:14 0/0:0:0:0:0:9:0%:18:1E0:31:9:4:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:30:9:7:2:12 0/0:35:1:1:0:12:8.33%:14:5E-1:35:11:8:3:19 0/0:36:1:1:0:12:8.33%:14:5E-1:38:11:11:0:24 0/0:0:0:0:0:16:0%:29:1E0:32:16:9:7:28 0/0:24:1:1:0:13:7.69%:14:5E-1:32:11:8:3:23 0/0:0:0:0:0:15:0%:29:1E0:35:15:10:5:21 0/0:0:0:0:0:13:0%:25:1E0:36:13:8:5:24 0/0:0:0:0:0:11:0%:22:1E0:31:11:6:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:10:0%:17:1E0:33:10:8:2:17 0/0:37:1:1:0:10:10%:11:5E-1:30:9:6:3:19 0/0:0:0:0:0:14:0%:25:1E0:32:14:6:8:21 0/0:38:1:1:0:10:10%:11:5E-1:33:9:5:4:14 0/0:32:1:0:1:14:7.14%:17:5E-1:34:13:10:3:24 0/0:0:0:0:0:9:0%:18:1E0:31:9:4:5:13 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:20 0/0:0:0:0:0:16:0%:29:1E0:34:16:11:5:25 0/0:36:1:1:0:11:9.09%:14:5E-1:33:10:9:1:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:9:0%:18:1E0:32:9:6:3:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:27:1:1:0:14:7.14%:17:5E-1:31:13:7:6:18 0/0:26:1:0:1:9:10%:8:5E-1:28:7:4:3:17 0/0:0:0:0:0:9:0%:18:1E0:31:9:5:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:37:10:8:2:21 0/0:32:1:1:0:22:4.35%:31:5E-1:31:21:14:7:39 0/1:31:8:7:1:19:36.36%:27:1.7241E-3:36:13:6:7:34 0/0:27:1:1:0:22:4.55%:31:5E-1:32:21:17:4:38 0/0:32:1:1:0:13:7.69%:18:5E-1:31:12:7:5:23 0/0:0:0:0:0:15:0%:29:1E0:35:15:7:8:23 0/0:0:0:0:0:16:0%:29:1E0:34:16:5:11:22 0/0:0:0:0:0:13:0%:25:1E0:33:13:12:1:18 0/0:0:0:0:0:12:0%:21:1E0:33:12:8:4:20 0/0:0:0:0:0:12:0%:21:1E0:31:12:6:6:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:26:1:0:1:19:5%:28:5E-1:34:18:15:3:27 0/0:26:1:0:1:14:7.14%:18:5E-1:34:12:8:4:27 0/0:30:1:1:0:29:3.45%:41:5E-1:31:27:17:10:52 0/0:0:0:0:0:15:0%:29:1E0:31:15:7:8:20 MTB_anc 3248308 . A C . PASS AC=16;AF=0.178;AN=90;ANN=C|missense_variant|MODERATE|ppsA_Rv2931|gene2992|transcript|Transcript_gene2992|Coding|1/1|c.2864A>C|p.His955Pro|2864/5631|2864/5631|955/1876||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3248308A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3248308A>C||||||;HOM=0;set=filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:2:2:0:9:22.22%:7:2.3529E-1:30:7:2:5:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:32:12:12:0:19:63.16%:47:1.8611E-5:31:7:3:4:49 0/0:34:3:3:0:13:23.08%:9:1.1E-1:28:10:1:9:28 0/1:29:6:5:1:10:60%:22:5.418E-3:28:4:0:4:22 0/0:29:3:3:0:9:33.33%:4:1.0294E-1:34:6:2:4:16 0/1:30:9:7:2:20:45%:32:6.1425E-4:30:11:1:10:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:35:2:2:0:11:18.18%:10:2.381E-1:32:9:4:5:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:30:2:2:0:10:20%:7:2.3684E-1:26:8:1:7:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:33:4:4:0:12:33.33%:4:4.6584E-2:29:8:3:5:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:33:4:4:0:16:25%:8:5.0612E-2:29:12:3:9:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:32:5:5:0:12:41.67%:3:1.8634E-2:28:7:1:6:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:31:6:6:0:8:75%:24:3.4965E-3:34:2:1:1:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:30:4:4:0:11:36.36%:4:4.5113E-2:33:7:0:7:14 0/1:33:7:7:0:21:33.33%:23:4.3101E-3:29:14:2:12:50 0/0:31:5:5:0:14:35.71%:4:2.037E-2:28:9:1:8:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:30:1:1:0:8:12.5%:8:5E-1:32:7:2:5:19 0/0:29:2:1:1:8:25%:5:2.3333E-1:29:6:1:5:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:32:7:5:2:16:43.75%:24:3.3988E-3:36:9:3:6:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:31:3:3:0:9:33.33%:4:1.0294E-1:30:6:3:3:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:31:2:2:0:9:22.22%:7:2.3529E-1:32:7:2:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:8:3:5:14:57.14%:30:9.6618E-4:26:6:1:5:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:4:4:0:10:40%:3:4.3344E-2:31:6:0:6:19 0/0:31:4:3:1:11:36.36%:4:4.5113E-2:28:7:1:6:19 0/0:30:5:5:0:15:33.33%:6:2.1073E-2:31:10:0:10:27 0/0:32:4:3:1:20:20%:13:5.3015E-2:30:16:3:13:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:32:6:6:0:12:50%:21:6.865E-3:28:6:1:5:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:31:7:6:1:15:46.67%:25:3.1609E-3:29:8:4:4:33 0/0:32:5:5:0:15:33.33%:6:2.1073E-2:26:10:1:9:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:9:9:0:16:56.25%:33:4.0786E-4:33:7:0:7:41 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:33:4:4:0:12:33.33%:4:4.6584E-2:28:8:1:7:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:7:0%:14:1E0:29:7:1:6:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:32:6:5:1:10:60%:22:5.418E-3:27:4:2:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:31:5:4:1:11:45.45%:3:1.7544E-2:34:6:1:5:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:30:8:8:0:14:57.14%:30:9.6618E-4:26:6:1:5:41 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:27:2:2:0:10:20%:7:2.3684E-1:30:8:2:6:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:33:3:3:0:9:33.33%:4:1.0294E-1:30:6:2:4:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:1:1:0:7:14.29%:8:5E-1:33:6:0:6:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:3:3:0:9:33.33%:4:1.0294E-1:29:6:1:5:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:27:7:0:7:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:6:0:18:33.33%:20:9.5308E-3:31:12:3:9:48 0/1:31:8:7:1:12:66.67%:31:6.7304E-4:29:4:1:3:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:22:2:1:1:8:25%:5:2.3333E-1:31:6:3:3:23 0/0:31:1:1:0:11:9.09%:14:5E-1:29:10:4:6:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:33:6:3:3:13:46.15%:21:7.4534E-3:26:7:3:4:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:30:9:8:1:13:69.23%:36:2.2883E-4:27:4:0:4:48 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3248316 . G C . PASS AC=1;AF=3.731e-03;AN=268;ANN=C|missense_variant|MODERATE|ppsA_Rv2931|gene2992|transcript|Transcript_gene2992|Coding|1/1|c.2872G>C|p.Glu958Gln|2872/5631|2872/5631|958/1876||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3248316G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3248316G>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:32:3:3:0:17:17.65%:14:1.1364E-1:36:14:2:12:18 0/0:32:2:2:0:8:25%:5:2.3333E-1:40:6:0:6:8 0/0:33:2:2:0:29:6.9%:37:2.4561E-1:37:27:3:24:29 0/0:35:3:3:0:26:11.54%:25:1.1765E-1:37:23:1:22:27 0/0:30:1:1:0:15:6.67%:21:5E-1:37:14:0:14:15 0/0:31:2:2:0:9:22.22%:7:2.3529E-1:35:7:0:7:12 0/0:0:0:0:0:21:0%:40:1E0:37:21:1:20:24 0/0:31:1:1:0:8:12.5%:8:5E-1:35:7:1:6:9 0/0:37:1:1:0:11:9.09%:14:5E-1:36:10:2:8:11 0/0:32:4:4:0:20:20%:13:5.3015E-2:40:16:2:14:21 0/0:38:1:1:0:21:4.76%:31:5E-1:38:20:4:16:25 0/0:30:1:1:0:19:5.26%:28:5E-1:36:18:4:14:19 0/0:0:0:0:0:7:0%:14:1E0:38:7:0:7:8 0/0:38:1:1:0:16:6.25%:21:5E-1:39:15:0:15:16 0/0:38:1:1:0:7:14.29%:8:5E-1:37:6:0:6:8 0/0:30:1:1:0:12:8.33%:14:5E-1:36:11:0:11:12 0/0:32:2:2:0:17:11.76%:18:2.4242E-1:37:15:0:15:19 0/0:28:2:2:0:10:20%:7:2.3684E-1:39:8:2:6:10 0/0:34:1:1:0:10:10%:11:5E-1:37:9:0:9:11 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:9 0/0:0:0:0:0:7:0%:14:1E0:34:7:0:7:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:1:1:0:14:7.14%:17:5E-1:38:13:0:13:14 0/0:35:1:1:0:20:5%:27:5E-1:36:19:1:18:22 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:19 0/0:34:5:5:0:22:22.73%:12:2.4248E-2:38:17:2:15:22 0/0:35:2:2:0:13:15.38%:13:2.4E-1:36:11:1:10:13 0/0:32:3:3:0:17:17.65%:11:1.129E-1:36:13:0:13:17 0/0:34:1:1:0:13:7.69%:18:5E-1:36:12:1:11:13 0/0:32:2:2:0:13:15.38%:13:2.4E-1:34:11:2:9:14 0/0:31:3:3:0:10:30%:4:1.0526E-1:36:7:3:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:5:5:0:26:19.23%:17:2.531E-2:35:21:2:19:28 0/0:0:0:0:0:7:0%:14:1E0:34:7:0:7:8 0/0:33:2:2:0:26:7.69%:30:2.451E-1:38:24:2:22:26 0/0:0:0:0:0:11:0%:22:1E0:39:11:2:9:12 0/0:33:2:2:0:13:15.38%:13:2.4E-1:37:11:2:9:14 0/0:34:4:4:0:36:11.11%:34:5.7257E-2:37:32:0:32:36 0/0:32:3:3:0:28:10.71%:28:1.1818E-1:38:25:1:24:28 0/0:33:4:4:0:12:33.33%:4:4.6584E-2:40:8:2:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:30:1:1:0:14:7.14%:17:5E-1:38:13:3:10:15 0/0:30:1:1:0:16:6.25%:21:5E-1:35:15:1:14:17 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:33:2:2:0:8:25%:5:2.3333E-1:37:6:1:5:10 0/0:0:0:0:0:10:0%:17:1E0:35:10:0:10:11 0/0:38:1:1:0:10:10%:11:5E-1:36:9:1:8:11 0/0:0:0:0:0:17:0%:33:1E0:38:17:2:15:18 0/0:30:1:1:0:11:9.09%:14:5E-1:37:10:0:10:11 0/0:35:3:3:0:20:15%:16:1.1538E-1:36:17:3:14:23 0/0:35:2:2:0:14:14.29%:12:2.4074E-1:36:12:0:12:14 0/0:37:1:1:0:13:7.69%:18:5E-1:35:12:1:11:16 0/0:0:0:0:0:11:0%:22:1E0:37:11:1:10:11 0/0:32:2:2:0:18:11.11%:18:2.4286E-1:38:16:3:13:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:28:2:2:0:11:18.18%:10:2.381E-1:35:9:3:6:11 0/0:31:1:1:0:12:8.33%:14:5E-1:38:11:2:9:12 0/0:0:0:0:0:7:0%:14:1E0:35:7:0:7:8 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:8 0/0:37:1:1:0:25:4%:38:5E-1:35:24:2:22:28 0/0:31:4:4:0:10:40%:3:4.3344E-2:36:6:0:6:10 0/0:32:1:1:0:15:6.67%:21:5E-1:36:14:0:14:16 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:11 0/0:0:0:0:0:13:0%:25:1E0:37:13:1:12:14 0/0:32:1:1:0:18:5.56%:24:5E-1:36:17:0:17:18 0/0:30:1:1:0:25:4%:38:5E-1:35:24:4:20:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:34:1:1:0:18:5.56%:24:5E-1:36:17:3:14:18 0/0:34:2:2:0:12:16.67%:10:2.3913E-1:39:10:0:10:13 0/0:30:3:3:0:17:17.65%:14:1.1364E-1:35:14:2:12:18 0/0:0:0:0:0:26:0%:47:1E0:36:26:7:19:26 0/0:33:2:2:0:23:8.7%:28:2.4444E-1:37:21:3:18:25 0/0:0:0:0:0:8:0%:14:1E0:40:8:0:8:9 0/0:33:5:5:0:33:15.15%:27:2.6557E-2:37:28:2:26:34 0/0:34:1:1:0:14:7.14%:17:5E-1:36:13:2:11:14 0/0:32:2:2:0:18:11.11%:18:2.4286E-1:36:16:2:14:18 0/0:0:0:0:0:9:0%:18:1E0:37:9:0:9:9 0/0:34:2:2:0:25:8%:31:2.449E-1:37:23:3:20:25 0/0:32:1:1:0:12:8.33%:14:5E-1:35:11:2:9:13 0/0:32:2:2:0:11:18.18%:10:2.381E-1:39:9:1:8:12 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:32:3:3:0:16:18.75%:11:1.129E-1:36:13:2:11:16 0/0:38:1:1:0:16:6.25%:21:5E-1:38:15:0:15:17 0/0:30:2:2:0:15:13.33%:16:2.4138E-1:39:13:1:12:15 0/0:35:2:2:0:11:18.18%:10:2.381E-1:37:9:1:8:11 0/0:31:3:3:0:15:20%:11:1.1207E-1:37:12:0:12:16 0/0:0:0:0:0:12:0%:21:1E0:37:12:0:12:12 0/0:31:4:4:0:22:18.18%:15:5.3885E-2:37:18:4:14:25 0/0:36:5:5:0:22:22.73%:12:2.4248E-2:36:17:1:16:22 0/0:31:1:1:0:31:3.23%:48:5E-1:36:30:2:28:32 0/0:0:0:0:0:12:0%:21:1E0:37:12:0:12:12 0/0:31:2:2:0:9:22.22%:7:2.3529E-1:37:7:1:6:9 0/0:30:3:3:0:13:23.08%:9:1.1E-1:35:10:2:8:13 0/0:31:4:4:0:24:16.67%:18:5.461E-2:36:20:2:18:24 0/0:33:3:3:0:15:20%:11:1.1207E-1:36:12:2:10:16 0/0:0:0:0:0:7:0%:14:1E0:37:7:0:7:9 0/0:32:1:1:0:10:10%:11:5E-1:36:9:0:9:10 0/0:31:2:2:0:15:13.33%:16:2.4138E-1:36:13:1:12:15 0/0:32:1:1:0:11:9.09%:14:5E-1:37:10:0:10:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:11 0/0:0:0:0:0:9:0%:18:1E0:36:9:0:9:9 0/0:0:0:0:0:7:0%:14:1E0:36:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:1:1:0:12:8.33%:14:5E-1:37:11:1:10:12 0/0:0:0:0:0:20:0%:36:1E0:38:20:2:18:20 0/0:38:1:1:0:16:6.25%:21:5E-1:36:15:5:10:17 0/0:29:2:2:0:18:11.11%:18:2.4286E-1:35:16:2:14:20 0/0:0:0:0:0:15:0%:29:1E0:35:15:0:15:17 0/0:32:2:2:0:19:10.53%:21:2.4324E-1:38:17:2:15:20 0/0:33:2:2:0:13:15.38%:13:2.4E-1:36:11:1:10:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:40:10:1:9:10 0/0:29:1:1:0:9:11.11%:11:5E-1:37:8:0:8:9 0/0:32:2:2:0:16:12.5%:15:2.4194E-1:37:14:1:13:17 0/0:34:1:1:0:10:10%:11:5E-1:36:9:1:8:12 0/0:36:3:3:0:15:20%:11:1.1207E-1:36:12:1:11:17 0/0:30:1:1:0:10:10%:11:5E-1:36:9:1:8:10 0/0:30:1:1:0:14:7.14%:17:5E-1:35:13:2:11:16 0/0:32:1:1:0:13:7.69%:18:5E-1:35:12:0:12:15 0/0:31:1:1:0:9:11.11%:11:5E-1:36:8:0:8:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:1:1:0:13:7.69%:18:5E-1:37:12:1:11:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:1:1:0:10:10%:11:5E-1:36:9:1:8:11 0/0:0:0:0:0:11:0%:22:1E0:36:11:1:10:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:34:9:3:6:10 0/0:38:1:1:0:8:12.5%:8:5E-1:35:7:1:6:8 0/0:0:0:0:0:9:0%:18:1E0:34:9:0:9:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:1:1:0:14:7.14%:17:5E-1:37:13:2:11:16 0/0:30:4:4:0:33:12.12%:32:5.6777E-2:36:29:4:25:36 0/0:0:0:0:0:19:0%:37:1E0:36:19:2:17:22 0/0:32:2:2:0:23:8.7%:28:2.4444E-1:36:21:2:19:24 0/0:30:2:2:0:14:14.29%:12:2.4074E-1:37:12:1:11:16 0/0:29:3:3:0:20:15%:16:1.1538E-1:36:17:3:14:21 0/0:32:1:1:0:18:5.56%:24:5E-1:36:17:2:15:19 0/0:34:2:2:0:10:20%:7:2.3684E-1:34:8:3:5:12 0/0:29:2:2:0:14:14.29%:12:2.4074E-1:37:12:1:11:14 0/0:0:0:0:0:15:0%:29:1E0:37:15:1:14:17 0/0:30:2:2:0:14:14.29%:12:2.4074E-1:36:12:1:11:14 0/0:30:1:1:0:15:6.67%:21:5E-1:35:14:3:11:19 0/0:30:2:2:0:18:11.11%:18:2.4286E-1:37:16:1:15:18 0/1:33:8:8:0:34:23.53%:26:2.4562E-3:37:26:1:25:34 0/0:34:2:2:0:15:13.33%:16:2.4138E-1:35:13:2:11:15 MTB_anc 3251386 . C T . PASS AC=14;AF=0.047;AN=300;ANN=T|synonymous_variant|LOW|ppsB_Rv2932|gene2993|transcript|Transcript_gene2993|Coding|1/1|c.315C>T|p.Asp105Asp|315/4617|315/4617|105/1538||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3251386C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3251386C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:47 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:21:27:48 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:16:0%:29:1E0:43:16:11:5:16 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:22 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:30 0/0:0:0:0:0:42:0%:77:1E0:41:42:28:14:43 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:17 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:51 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:25 0/0:0:0:0:0:42:0%:77:1E0:46:42:24:18:42 0/0:0:0:0:0:34:0%:62:1E0:46:34:11:23:34 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:26 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:19 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:31 0/0:0:0:0:0:63:0%:99:1E0:46:63:32:31:63 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:36 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:39 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:22:10:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:45 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:21 0/0:37:1:0:1:25:4%:38:5E-1:42:24:16:8:25 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:40 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:32 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:47 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:48:0%:89:1E0:46:48:25:23:49 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:13:0%:25:1E0:48:13:6:7:13 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:27 0/0:0:0:0:0:18:0%:32:1E0:51:18:10:8:18 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:22 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:19 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:20 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:49:19:12:7:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:23:11:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:33 0/0:0:0:0:0:45:0%:85:1E0:44:45:28:17:46 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:21 0/0:0:0:0:0:43:0%:82:1E0:39:43:28:15:43 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:46:0%:85:1E0:40:46:28:18:46 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:29 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:28 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:31 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:21 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:26:0%:48:1E0:45:25:15:10:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:21 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:40:0%:74:1E0:37:40:27:13:41 0/0:0:0:0:0:28:0%:51:1E0:36:28:20:8:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:35 0/0:0:0:0:0:48:0%:89:1E0:40:48:27:21:49 0/0:0:0:0:0:59:0%:99:1E0:39:59:37:22:61 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:36 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:27 0/0:0:0:0:0:40:0%:74:1E0:37:40:28:12:40 0/0:0:0:0:0:38:0%:70:1E0:37:38:24:14:40 0/0:0:0:0:0:52:0%:96:1E0:38:52:34:18:52 0/0:0:0:0:0:47:0%:89:1E0:36:47:24:23:51 0/0:0:0:0:0:26:0%:47:1E0:36:26:17:9:29 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:32 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:42 0/0:0:0:0:0:28:0%:51:1E0:36:28:20:8:31 0/0:0:0:0:0:39:0%:74:1E0:36:39:21:18:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:36 0/0:0:0:0:0:49:0%:93:1E0:38:49:28:21:50 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:33 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:23 0/0:0:0:0:0:52:0%:96:1E0:36:52:26:26:53 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:31 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:45 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 MTB_anc 3254880 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|ppsB_Rv2932|gene2993|transcript|Transcript_gene2993|Coding|1/1|c.3809T>G|p.Leu1270Arg|3809/4617|3809/4617|1270/1538||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3254880T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3254880T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:53:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:54:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:22:9:13:23:95.65%:99:2.9149E-12:38:1:1:0:24 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:53:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:44:20:24:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:7:19:27:96.3%:99:1.4382E-14:38:1:1:0:27 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:12:19:32:96.88%:99:1.8007E-17:38:1:1:0:33 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:69:36:33:69:100%:99:4.233E-41:0:0:0:0:70 1/1:43:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:17:16:34:97.06%:99:1.2301E-18:60:1:1:0:35 1/1:45:49:19:30:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 3256911 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|ppsC_Rv2933|gene2994|transcript|Transcript_gene2994|Coding|1/1|c.1227T>C|p.His409His|1227/6567|1227/6567|409/2188||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3256911T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3256911T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:43:52:19:33:54 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:24 0/0:0:0:0:0:48:0%:89:1E0:47:48:21:27:50 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:51:24:13:11:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:44 0/0:0:0:0:0:24:0%:44:1E0:52:24:11:13:24 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:49 0/0:0:0:0:0:26:0%:47:1E0:43:26:19:7:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:23 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:22 0/0:0:0:0:0:29:0%:55:1E0:49:29:20:9:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:56:0%:99:1E0:44:56:28:28:57 0/0:0:0:0:0:32:0%:59:1E0:47:32:9:23:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:24 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:34 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:49:30:12:18:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:31 0/0:0:0:0:0:61:0%:99:1E0:47:61:28:33:63 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:57:0%:99:1E0:46:57:35:22:58 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:41 0/0:0:0:0:0:17:0%:33:1E0:51:17:7:10:17 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:44 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:31 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:44 0/0:0:0:0:0:13:0%:25:1E0:45:13:6:7:14 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:23 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:37 0/0:34:1:1:0:40:2.5%:62:5E-1:48:39:18:21:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:28 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:48:0%:89:1E0:44:48:20:28:49 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:33 0/0:25:1:0:1:23:4.35%:34:5E-1:44:22:13:9:23 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:39 0/0:0:0:0:0:20:0%:36:1E0:49:20:12:8:20 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:37 0/0:0:0:0:0:25:0%:48:1E0:50:25:13:12:26 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:37:0%:70:1E0:50:37:19:18:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:33 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:47 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:20:0%:36:1E0:47:20:4:16:21 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:37 0/0:0:0:0:0:26:0%:47:1E0:49:26:17:9:26 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:34 0/0:0:0:0:0:25:0%:48:1E0:50:25:11:14:26 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:13:25:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:31 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:11:28:40 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:39 0/0:0:0:0:0:50:0%:92:1E0:40:50:22:28:51 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:22:13:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:22 0/0:0:0:0:0:56:0%:99:1E0:42:56:24:32:56 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:50 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:25 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:47 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:33 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:44 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:49 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:34 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:47 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:48:0%:89:1E0:39:48:22:26:48 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:46:0%:85:1E0:38:46:22:24:48 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:40 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:21 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:43 0/0:0:0:0:0:54:0%:99:1E0:44:54:24:30:54 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:48 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:43 MTB_anc 3258274 . A C . PASS AC=299;AF=0.997;AN=300;ANN=C|missense_variant|MODERATE|ppsC_Rv2933|gene2994|transcript|Transcript_gene2994|Coding|1/1|c.2590A>C|p.Ser864Arg|2590/6567|2590/6567|864/2188||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3258274A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3258274A>C||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:52:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:53:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:52:37:15:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:51:8:6:2:9:88.89%:41:7.77E-5:0:0:0:0:9 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:29:7:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:27 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:27:24:3:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 MTB_anc 3258359 . A C . PASS AC=14;AF=0.054;AN=258;ANN=C|missense_variant|MODERATE|ppsC_Rv2933|gene2994|transcript|Transcript_gene2994|Coding|1/1|c.2675A>C|p.Gln892Pro|2675/6567|2675/6567|892/2188||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3258359A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3258359A>C||||||;HOM=0;set=filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:33:4:4:0:16:26.67%:8:4.9808E-2:37:11:2:9:16 0/0:36:2:2:0:8:25%:5:2.3333E-1:33:6:1:5:9 0/1:33:7:7:0:31:22.58%:22:5.3469E-3:38:24:4:20:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:3:3:0:13:23.08%:9:1.1E-1:37:10:1:9:14 0/0:34:1:1:0:10:10%:11:5E-1:34:9:2:7:10 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:10 0/0:34:5:5:0:11:45.45%:3:1.7544E-2:36:6:3:3:11 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:8 0/0:30:4:4:0:21:19.05%:15:5.3471E-2:37:17:2:15:23 0/0:33:3:3:0:13:23.08%:9:1.1E-1:36:10:2:8:13 0/0:30:1:1:0:14:7.14%:17:5E-1:38:13:2:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:31:5:5:0:20:25%:10:2.3562E-2:34:15:1:14:21 0/0:30:1:1:0:14:7.14%:17:5E-1:37:13:2:11:15 0/0:33:5:5:0:22:22.73%:12:2.4248E-2:35:17:3:14:24 0/0:32:2:2:0:12:16.67%:10:2.3913E-1:35:10:4:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:7:7:0:21:33.33%:23:4.3101E-3:35:14:2:12:22 0/0:30:3:3:0:16:20%:11:1.1207E-1:38:12:2:10:17 0/0:0:0:0:0:7:0%:14:1E0:38:7:1:6:7 0/0:34:2:2:0:19:10.53%:21:2.4324E-1:36:17:2:15:21 0/0:32:4:4:0:23:17.39%:18:5.4264E-2:37:19:2:17:24 0/1:32:7:7:0:24:29.17%:23:4.7006E-3:35:17:7:10:24 0/0:33:4:4:0:11:36.36%:4:4.5113E-2:36:7:3:4:11 0/0:31:1:1:0:14:7.14%:17:5E-1:38:13:3:10:16 0/0:32:2:2:0:12:16.67%:10:2.3913E-1:39:10:2:8:13 0/0:30:1:1:0:9:11.11%:11:5E-1:34:8:3:5:9 0/0:32:5:5:0:13:38.46%:4:1.9565E-2:34:8:2:6:15 0/0:33:2:2:0:11:18.18%:10:2.381E-1:36:9:1:8:13 0/0:30:1:1:0:9:11.11%:11:5E-1:33:8:2:6:9 0/0:33:2:2:0:14:14.29%:12:2.4074E-1:34:12:5:7:15 0/0:34:5:5:0:18:27.78%:8:2.2727E-2:35:13:3:10:21 0/0:28:2:2:0:13:15.38%:13:2.4E-1:37:11:2:9:13 0/1:31:6:6:0:17:35.29%:20:9.2021E-3:36:11:2:9:19 0/0:31:2:2:0:24:8.33%:27:2.4468E-1:35:22:5:17:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:8:8:0:37:21.62%:25:2.5617E-3:36:29:9:20:39 0/0:28:2:2:0:21:9.52%:25:2.439E-1:35:19:2:17:22 0/0:0:0:0:0:16:0%:29:1E0:35:16:1:15:16 0/0:33:2:2:0:11:18.18%:10:2.381E-1:33:9:3:6:11 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:14 0/0:31:1:1:0:13:7.69%:18:5E-1:38:12:2:10:14 0/0:35:2:2:0:10:20%:7:2.3684E-1:36:8:1:7:11 0/0:31:3:3:0:13:23.08%:9:1.1E-1:33:10:2:8:14 0/0:33:2:2:0:10:20%:7:2.3684E-1:37:8:1:7:11 0/0:37:1:1:0:15:6.67%:21:5E-1:35:14:5:9:17 0/0:32:2:2:0:12:16.67%:10:2.3913E-1:35:10:3:7:12 0/0:0:0:0:0:8:0%:10:1E0:35:6:1:5:8 0/1:30:6:6:0:19:31.58%:20:9.828E-3:35:13:3:10:23 0/0:33:2:2:0:9:22.22%:7:2.3529E-1:36:7:2:5:12 0/0:33:3:3:0:10:30%:4:1.0526E-1:35:7:0:7:12 0/0:32:2:2:0:14:14.29%:12:2.4074E-1:34:12:3:9:15 0/0:34:4:4:0:14:28.57%:6:4.8889E-2:38:10:2:8:15 0/0:31:2:2:0:11:18.18%:10:2.381E-1:35:9:0:9:11 0/0:36:1:1:0:10:10%:11:5E-1:35:9:2:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:32:3:3:0:13:23.08%:9:1.1E-1:38:10:2:8:14 0/0:36:2:2:0:13:15.38%:13:2.4E-1:40:11:5:6:15 0/1:33:7:7:0:29:24.14%:22:5.1909E-3:35:22:8:14:31 0/0:30:4:4:0:15:26.67%:8:4.9808E-2:36:11:2:9:17 0/0:36:3:3:0:16:18.75%:11:1.129E-1:36:13:1:12:17 0/0:36:1:1:0:11:9.09%:14:5E-1:35:10:5:5:12 0/0:32:3:3:0:14:21.43%:9:1.1111E-1:33:11:3:8:19 0/1:33:7:7:0:26:26.92%:23:4.9169E-3:34:19:4:15:27 0/1:33:10:10:0:27:37.04%:34:3.5253E-4:34:17:6:11:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:30:3:3:0:16:18.75%:11:1.129E-1:35:13:3:10:18 0/0:30:1:1:0:9:11.11%:11:5E-1:36:8:3:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:33:2:2:0:19:10.53%:21:2.4324E-1:35:17:5:12:19 0/0:34:4:4:0:21:19.05%:15:5.3471E-2:34:17:4:13:24 0/0:34:2:2:0:9:22.22%:7:2.3529E-1:39:7:1:6:10 0/1:31:8:8:0:25:32%:26:2.0146E-3:35:17:4:13:25 0/0:29:3:3:0:19:15.79%:17:1.1486E-1:36:16:5:11:20 0/0:33:3:3:0:14:21.43%:9:1.1111E-1:35:11:2:9:15 0/0:0:0:0:0:13:0%:25:1E0:40:13:3:10:14 0/0:34:1:1:0:18:5.56%:24:5E-1:36:17:7:10:19 0/0:29:2:2:0:9:22.22%:7:2.3529E-1:33:7:2:5:11 0/0:31:2:2:0:9:22.22%:7:2.3529E-1:34:7:1:6:9 0/1:30:6:6:0:17:35.29%:20:9.2021E-3:34:11:3:8:19 0/0:0:0:0:0:8:0%:14:1E0:35:8:4:4:9 0/0:34:3:3:0:16:18.75%:11:1.129E-1:33:13:3:10:18 0/0:32:5:5:0:18:27.78%:8:2.2727E-2:37:13:5:8:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:33:4:4:0:14:28.57%:6:4.8889E-2:35:10:2:8:14 0/0:34:2:2:0:8:25%:5:2.3333E-1:35:6:1:5:9 0/0:35:3:3:0:9:33.33%:4:1.0294E-1:39:6:2:4:10 0/0:33:5:5:0:20:25%:10:2.3562E-2:35:15:3:12:21 0/0:35:4:4:0:16:25%:8:5.0612E-2:37:12:3:9:19 0/0:35:4:4:0:18:22.22%:10:5.1948E-2:33:14:4:10:23 0/1:36:7:7:0:16:43.75%:24:3.3988E-3:36:9:1:8:16 0/0:0:0:0:0:17:0%:33:1E0:36:17:4:13:17 0/0:31:5:5:0:13:38.46%:4:1.9565E-2:36:8:2:6:17 0/0:31:3:3:0:22:13.64%:19:1.1628E-1:34:19:2:17:23 0/0:38:1:1:0:10:10%:11:5E-1:35:9:2:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:30:5:5:0:16:31.25%:6:2.1691E-2:35:11:1:10:17 0/0:30:5:5:0:17:29.41%:8:2.2239E-2:36:12:0:12:17 0/0:31:3:3:0:16:18.75%:11:1.129E-1:36:13:3:10:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:31:3:3:0:17:17.65%:14:1.1364E-1:33:14:4:10:17 0/0:32:2:2:0:8:25%:5:2.3333E-1:36:6:0:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:31:4:4:0:13:30.77%:6:4.7826E-2:33:9:1:8:15 0/0:32:2:2:0:17:12.5%:15:2.4194E-1:37:14:4:10:17 0/0:32:2:2:0:13:15.38%:13:2.4E-1:35:11:2:9:13 0/0:34:1:1:0:10:10%:11:5E-1:36:9:1:8:11 0/0:32:1:1:0:11:9.09%:14:5E-1:34:10:2:8:12 0/0:32:3:3:0:23:13.04%:22:1.1667E-1:35:20:3:17:24 0/0:34:1:1:0:10:10%:11:5E-1:34:9:3:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:4:4:0:15:26.67%:8:4.9808E-2:36:11:2:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:32:10:1:9:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:32:3:3:0:10:30%:4:1.0526E-1:33:7:3:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:31:3:3:0:15:20%:11:1.1207E-1:34:12:4:8:16 0/0:32:5:5:0:12:41.67%:3:1.8634E-2:35:7:2:5:17 0/0:33:2:2:0:15:13.33%:16:2.4138E-1:37:13:2:11:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:1:1:0:7:14.29%:8:5E-1:34:6:0:6:8 0/0:27:2:2:0:8:25%:5:2.3333E-1:37:6:1:5:9 0/0:30:1:1:0:9:11.11%:11:5E-1:38:8:1:7:9 0/0:31:2:2:0:13:15.38%:13:2.4E-1:37:11:3:8:13 0/0:0:0:0:0:7:0%:14:1E0:35:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:31:2:2:0:10:20%:7:2.3684E-1:35:8:3:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:30:1:1:0:10:10%:11:5E-1:35:9:3:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:34:1:1:0:8:12.5%:8:5E-1:34:7:0:7:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:32:3:3:0:14:21.43%:9:1.1111E-1:36:11:1:10:15 0/0:30:3:3:0:13:23.08%:9:1.1E-1:36:10:0:10:14 0/0:33:2:2:0:15:13.33%:16:2.4138E-1:36:13:0:13:16 0/0:35:5:5:0:18:27.78%:8:2.2727E-2:37:13:2:11:18 0/0:32:4:4:0:14:28.57%:6:4.8889E-2:34:10:1:9:16 0/0:32:1:1:0:12:8.33%:14:5E-1:38:11:4:7:16 0/0:35:4:4:0:19:21.05%:13:5.251E-2:36:15:3:12:19 0/0:30:3:3:0:17:17.65%:14:1.1364E-1:35:14:1:13:19 0/1:31:6:6:0:16:37.5%:20:8.837E-3:35:10:2:8:17 0/0:31:1:1:0:25:4%:38:5E-1:34:24:4:20:27 0/0:33:5:5:0:16:31.25%:6:2.1691E-2:36:11:1:10:18 0/1:32:7:7:0:23:30.43%:23:4.5803E-3:36:16:4:12:23 0/0:31:6:6:0:26:23.08%:13:1.1309E-2:34:20:3:17:28 0/0:31:5:5:0:28:17.86%:19:2.5729E-2:34:23:2:21:30 0/0:33:4:4:0:18:22.22%:10:5.1948E-2:37:14:0:14:19 MTB_anc 3266030 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|ppsD_Rv2934|gene2995|transcript|Transcript_gene2995|Coding|1/1|c.3783G>A|p.Ser1261Ser|3783/5484|3783/5484|1261/1827||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3266030G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3266030G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:48:40:8:48:100%:99:1.554E-28:0:0:0:0:49 1/1:37:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:40:35:5:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:36:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:32:29:3:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:20:20:0:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:27:26:1:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:26:23:3:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:28:25:3:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:12:12:0:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:34:32:2:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:24:23:1:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:31:30:1:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:36:30:29:1:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:26:23:3:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:26:24:2:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:37:24:21:3:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:28:24:4:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:36:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:20:20:0:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:33:32:1:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:30:29:1:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:57:53:4:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:37:31:25:6:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:30:28:2:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:36:30:6:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:25:23:2:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:26:24:2:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:26:24:2:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:30:28:2:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:36:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:31:29:2:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:38:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:28:25:3:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:35:34:1:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:17:17:0:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:38:31:7:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:36:49:44:5:49:100%:99:3.925E-29:0:0:0:0:50 1/1:36:19:19:0:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:25:25:0:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:30:27:3:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:25:19:6:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:37:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:37:33:4:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:18:18:0:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:37:32:5:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:36:30:27:3:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:27:25:2:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:22:22:0:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:23:22:1:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:12:11:1:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:26:24:2:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:36:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:49:44:5:49:100%:99:3.925E-29:0:0:0:0:52 1/1:38:28:25:3:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:22:22:0:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:32:30:2:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:20:19:1:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:26:23:3:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:36:29:25:4:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:26:24:2:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:28:25:3:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:26:24:2:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:34:32:2:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:35:25:21:4:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:33:31:2:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:35:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:40:32:8:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:36:37:34:3:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:16:16:0:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:35:33:2:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:27:27:0:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:33:29:4:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:35:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:36:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:29:26:3:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:32:30:2:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:35:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:34:24:19:5:24:100%:99:3.101E-14:0:0:0:0:27 1/1:36:30:26:4:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:32:29:3:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:35:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:47:44:3:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:21:21:0:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:25:23:2:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:37:34:3:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:36:29:26:3:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:25:23:2:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:34:30:4:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:24:21:3:25:96%:99:3.101E-14:0:0:0:0:27 1/1:36:29:28:1:29:100%:99:3.3259E-17:0:0:0:0:31 MTB_anc 3271037 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|ppsE_Rv2935|gene2996|transcript|Transcript_gene2996|Coding|1/1|c.3301G>A|p.Asp1101Asn|3301/4467|3301/4467|1101/1488||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3271037G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3271037G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:52:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:53:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:52:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:62:34:28:63:98.41%:99:6.5755E-37:0:0:0:0:63 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:61:34:27:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:51:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:48:26:22:49:97.96%:99:1.9625E-27:38:1:1:0:49 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:51:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:38:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:73:34:39:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 3273138 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|drrA_Rv2936|gene2997|transcript|Transcript_gene2997|Coding|1/1|c.925G>C|p.Asp309His|925/996|925/996|309/331||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3273138G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3273138G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:52:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:24:7:17:25:96%:99:3.101E-14:0:0:0:0:27 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:51:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:52:15:37:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:32:14:18:33:96.97%:99:5.4567E-19:0:0:0:0:35 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:51:27:24:52:98.08%:99:2.5024E-30:0:0:0:0:53 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:24:14:10:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:49:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:43:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:42:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:40:61:22:39:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:60:35:25:60:100%:99:1.035E-35:0:0:0:0:62 1/1:39:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:52 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:67:37:30:67:100%:99:6.6743E-40:0:0:0:0:71 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:63:37:26:63:100%:99:1.657E-37:0:0:0:0:63 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 3275151 . T TA . PASS AC=4;AF=0.013;AN=300;ANN=TA|frameshift_variant|HIGH|papA5_Rv2939|gene3000|transcript|Transcript_gene3000|Coding|1/1|c.203_204insA|p.Ala69fs|204/1269|204/1269|68/422||,TA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3275151_3275152insA||||||,TA|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3275151_3275152insA||||||;HOM=0;LOF=(papA5_Rv2939|gene3000|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:5:5:0:23:21.74%:14:2.4548E-2:40:18:9:9:23 0/0:37:2:2:0:23:8.7%:28:2.4444E-1:43:21:15:6:26 0/0:41:5:5:0:34:14.71%:27:2.6693E-2:38:29:17:12:35 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:21 0/0:34:1:1:0:10:10%:11:5E-1:37:9:7:2:12 0/0:37:4:4:0:18:22.22%:10:5.1948E-2:40:14:6:8:20 0/0:39:6:6:0:22:27.27%:9:1.057E-2:39:16:9:7:23 0/0:55:2:2:0:18:11.11%:18:2.4286E-1:38:16:12:4:19 0/0:27:2:2:0:26:7.41%:34:2.4528E-1:41:25:20:5:29 0/0:44:5:5:0:24:20.83%:14:2.4823E-2:43:19:9:10:25 0/0:37:3:3:0:18:16.67%:14:1.1429E-1:36:15:8:7:19 0/0:37:3:3:0:23:13.04%:22:1.1667E-1:37:20:14:6:24 0/0:30:1:1:0:15:6.67%:21:5E-1:40:14:8:6:17 0/0:37:3:3:0:27:11.11%:28:1.1792E-1:40:24:19:5:30 0/0:37:1:1:0:9:11.11%:11:5E-1:38:8:6:2:9 0/0:38:2:2:0:25:8%:31:2.449E-1:41:23:14:9:27 0/0:54:2:2:0:20:10%:21:2.4359E-1:40:18:11:7:23 0/0:38:1:1:0:12:8.33%:14:5E-1:43:11:6:5:14 0/0:35:3:3:0:17:17.65%:14:1.1364E-1:35:14:10:4:17 0/0:36:4:4:0:15:26.67%:8:4.9808E-2:39:11:7:4:17 0/0:37:3:3:0:13:23.08%:9:1.1E-1:38:10:5:5:13 0/0:45:3:3:0:20:15%:16:1.1538E-1:42:17:7:10:20 0/0:37:2:2:0:26:7.69%:30:2.451E-1:42:24:14:10:29 0/0:52:2:2:0:29:6.9%:37:2.4561E-1:40:27:16:11:31 0/0:46:4:4:0:18:22.22%:10:5.1948E-2:42:14:10:4:20 0/0:37:2:2:0:16:12.5%:15:2.4194E-1:44:14:6:8:18 0/0:37:2:2:0:18:11.11%:18:2.4242E-1:36:15:7:8:18 0/0:37:2:2:0:12:16.67%:10:2.3913E-1:48:10:6:4:12 0/0:37:5:5:0:17:29.41%:8:2.2239E-2:42:12:5:7:17 0/0:38:1:1:0:17:5.88%:24:5E-1:40:16:9:7:18 0/0:37:3:3:0:18:16.67%:14:1.1429E-1:42:15:10:5:20 0/0:34:2:2:0:12:16.67%:10:2.3913E-1:41:10:6:4:14 0/0:45:4:4:0:29:13.79%:26:5.5981E-2:45:25:17:8:33 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:17 0/0:36:1:1:0:21:4.76%:31:5E-1:43:20:8:12:23 0/0:37:2:2:0:23:8.7%:28:2.4444E-1:37:21:10:11:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:25 0/0:55:4:4:0:40:10%:40:5.7784E-2:40:36:23:13:48 0/0:38:1:1:0:31:3.23%:48:5E-1:38:30:16:14:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:29 0/0:37:3:3:0:15:20%:11:1.1207E-1:39:12:5:7:15 0/1:39:8:8:0:25:32%:26:2.0146E-3:39:17:11:6:28 0/0:37:2:2:0:22:9.09%:24:2.4419E-1:36:20:14:6:22 0/0:36:4:4:0:20:20%:13:5.3015E-2:44:16:9:7:21 0/0:36:1:1:0:17:5.88%:24:5E-1:43:16:10:6:18 0/0:37:2:2:0:20:10%:21:2.4359E-1:38:18:8:10:20 0/0:37:4:4:0:18:22.22%:10:5.1948E-2:40:14:10:4:18 0/0:37:4:4:0:20:20%:13:5.3015E-2:42:16:9:7:21 0/0:55:2:2:0:22:9.09%:24:2.4419E-1:43:20:11:9:27 0/0:34:1:1:0:25:4%:38:5E-1:43:24:13:11:29 0/0:0:0:0:0:8:0%:14:1E0:45:8:4:4:8 0/0:38:1:1:0:15:6.67%:21:5E-1:35:14:10:4:15 0/0:37:3:3:0:16:18.75%:11:1.129E-1:42:13:9:4:16 0/0:49:2:2:0:14:14.29%:12:2.4074E-1:38:12:8:4:15 0/0:37:3:3:0:19:15.79%:17:1.1486E-1:38:16:10:6:19 0/0:37:2:2:0:18:11.11%:18:2.4286E-1:38:16:7:9:18 0/0:37:5:5:0:29:17.24%:22:2.5917E-2:40:24:15:9:30 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:16 0/0:0:0:0:0:28:0%:51:1E0:36:28:19:9:29 0/0:45:3:3:0:31:9.68%:34:1.1885E-1:40:28:12:16:32 0/0:44:5:5:0:21:23.81%:10:2.3562E-2:37:15:9:6:23 0/0:36:1:1:0:13:7.69%:18:5E-1:42:12:8:4:14 0/0:36:1:1:0:17:5.88%:24:5E-1:39:16:11:5:18 0/0:36:1:1:0:22:4.55%:31:5E-1:40:21:10:11:24 0/0:38:2:2:0:27:7.41%:34:2.4528E-1:41:25:14:11:28 0/0:45:4:4:0:29:13.79%:26:5.5981E-2:38:25:16:9:34 0/0:37:2:2:0:16:12.5%:15:2.4194E-1:39:14:6:8:19 0/0:56:2:2:0:32:6.25%:40:2.4603E-1:38:30:18:12:36 0/0:38:1:1:0:12:8.33%:14:5E-1:47:11:8:3:13 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:23 0/0:37:4:4:0:26:15.38%:20:5.5222E-2:42:22:11:11:27 0/0:37:2:2:0:20:10%:21:2.4359E-1:44:18:8:10:22 0/0:37:1:1:0:18:5.56%:24:5E-1:42:17:10:7:19 0/1:46:7:7:0:28:25%:22:5.1054E-3:46:21:11:10:33 0/1:37:8:8:0:25:32%:26:2.0146E-3:38:17:13:4:25 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:19 0/0:48:2:2:0:24:8.33%:27:2.4468E-1:36:22:13:9:24 0/0:37:3:3:0:24:12.5%:22:1.1702E-1:43:21:11:10:25 0/0:38:3:3:0:23:13.04%:22:1.1667E-1:39:20:13:7:24 0/0:47:3:3:0:11:27.27%:7:1.0714E-1:46:8:5:3:14 0/0:38:2:2:0:18:11.11%:18:2.4286E-1:44:16:7:9:19 0/0:50:2:2:0:19:10.53%:21:2.4324E-1:39:17:11:6:21 0/0:38:1:1:0:23:4.35%:34:5E-1:38:22:16:6:23 0/0:42:5:5:0:23:21.74%:14:2.4548E-2:37:18:11:7:26 0/0:37:1:1:0:15:6.67%:21:5E-1:40:14:8:6:15 0/0:38:1:1:0:13:7.69%:18:5E-1:38:12:11:1:13 0/0:48:2:2:0:20:10%:21:2.4359E-1:41:18:10:8:20 0/0:38:1:1:0:21:4.76%:31:5E-1:40:20:15:5:21 0/0:37:3:3:0:23:13.04%:22:1.1667E-1:42:20:15:5:26 0/0:50:3:3:0:25:12%:25:1.1735E-1:44:22:11:11:26 0/0:36:1:1:0:19:5.26%:28:5E-1:43:18:13:5:20 0/0:37:3:3:0:18:16.67%:14:1.1429E-1:43:15:8:7:19 0/0:37:2:2:0:27:7.41%:34:2.4528E-1:39:25:20:5:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:37:5:5:0:50:10%:49:2.8142E-2:39:45:24:21:51 0/0:37:2:2:0:25:8%:31:2.449E-1:37:23:15:8:26 0/0:38:1:1:0:18:5.56%:24:5E-1:38:17:12:5:19 0/0:35:3:3:0:21:14.29%:19:1.1585E-1:37:18:13:5:22 0/0:36:1:1:0:18:5.56%:24:5E-1:35:17:11:6:22 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:13 0/0:38:1:1:0:23:4.35%:34:5E-1:37:22:10:12:23 0/0:37:1:1:0:16:6.25%:21:5E-1:39:15:11:4:16 0/0:38:1:1:0:16:6.25%:21:5E-1:37:15:11:4:21 0/0:37:1:1:0:15:6.67%:21:5E-1:38:14:7:7:16 0/0:34:3:3:0:24:12.5%:22:1.1702E-1:35:21:17:4:24 0/0:37:3:3:0:18:16.67%:14:1.1429E-1:37:15:8:7:18 0/0:37:3:3:0:19:15.79%:17:1.1486E-1:41:16:10:6:20 0/0:45:4:4:0:22:18.18%:15:5.3885E-2:40:18:10:8:23 0/0:37:2:2:0:31:6.45%:40:2.459E-1:41:29:10:19:33 0/0:37:2:2:0:28:7.14%:34:2.4545E-1:39:26:16:10:32 0/0:43:4:4:0:25:16%:21:5.4928E-2:44:21:6:15:25 0/0:52:2:2:0:19:10.53%:21:2.4324E-1:39:17:11:6:22 0/0:36:3:3:0:19:15.79%:17:1.1486E-1:38:16:10:6:20 0/0:37:1:1:0:25:4%:38:5E-1:38:24:16:8:26 0/0:36:3:3:0:25:12%:25:1.1735E-1:35:22:14:8:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:22 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:12 0/0:36:2:2:0:22:9.09%:24:2.4419E-1:43:20:13:7:25 0/0:0:0:0:0:15:0%:29:1E0:36:15:10:5:16 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:35 0/0:38:2:2:0:32:6.25%:40:2.4603E-1:38:30:17:13:33 0/0:37:4:4:0:24:16.67%:18:5.461E-2:37:20:9:11:25 0/0:37:3:3:0:18:16.67%:14:1.1429E-1:34:15:12:3:20 0/0:36:2:2:0:28:7.14%:34:2.4545E-1:36:26:15:11:29 0/0:35:2:2:0:19:10.53%:21:2.4324E-1:34:17:14:3:20 0/0:36:1:1:0:29:3.45%:45:5E-1:36:28:18:10:29 0/0:38:1:1:0:15:6.67%:21:5E-1:34:14:7:7:17 0/0:36:2:2:0:22:9.09%:24:2.4419E-1:38:20:12:8:25 0/0:37:3:3:0:25:12%:25:1.1735E-1:38:22:16:6:26 0/0:37:1:1:0:18:5.56%:24:5E-1:38:17:12:5:18 0/0:38:1:1:0:20:5%:27:5E-1:37:19:13:6:23 0/0:38:1:1:0:20:5%:27:5E-1:37:19:10:9:26 0/0:37:3:3:0:20:15%:16:1.1538E-1:36:17:10:7:21 0/0:38:1:1:0:24:4.17%:34:5E-1:36:23:17:6:29 0/0:38:1:1:0:13:7.69%:18:5E-1:34:12:6:6:15 0/0:36:2:2:0:21:9.52%:25:2.439E-1:43:19:9:10:24 0/0:36:2:2:0:21:9.52%:25:2.439E-1:36:19:12:7:22 0/0:38:1:1:0:14:7.14%:17:5E-1:39:13:9:4:14 0/0:29:3:3:0:20:14.29%:19:1.1585E-1:40:18:11:7:23 0/0:32:4:4:0:27:14.29%:23:5.5746E-2:36:24:14:10:30 0/0:37:3:3:0:21:14.29%:19:1.1585E-1:41:18:7:11:22 0/0:38:1:1:0:15:6.67%:21:5E-1:39:14:11:3:16 0/0:37:4:4:0:32:12.5%:29:5.6596E-2:41:28:16:12:33 0/0:37:5:5:0:32:15.62%:24:2.6412E-2:43:27:16:11:34 0/0:38:4:4:0:33:12.12%:32:5.6777E-2:39:29:13:16:34 0/0:0:0:0:0:16:0%:29:1E0:38:16:12:4:18 0/0:37:3:3:0:28:10.71%:28:1.1818E-1:40:25:15:10:28 0/0:37:1:1:0:36:2.78%:55:5E-1:43:35:20:15:37 0/1:42:7:7:0:32:21.88%:22:5.4182E-3:36:25:20:5:33 0/0:36:1:1:0:14:7.14%:17:5E-1:36:13:8:5:15 MTB_anc 3277155 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|mas_Rv2940c|gene3001|transcript|Transcript_gene3001|Coding|1/1|c.5561T>C|p.Val1854Ala|5561/6336|5561/6336|1854/2111||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3277155A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3277155A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:20:17:38:97.37%:99:5.6582E-21:37:1:0:1:39 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:19:10:9:20:95%:98:1.5234E-10:32:1:1:0:20 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:38:22:16:39:97.44%:99:1.4697E-21:31:1:1:0:39 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:54:26:28:55:98.18%:99:5.6837E-31:60:1:0:1:55 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:29:18:11:30:96.67%:99:2.6212E-16:38:1:1:0:30 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:36:20:16:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:32:14:18:33:96.97%:99:4.7095E-18:37:1:0:1:33 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:63:30:33:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:16:14:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:43:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:39:17:22:40:97.5%:99:3.8137E-22:38:1:0:1:40 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:31:21:10:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:20:17:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:28:17:11:29:96.55%:99:9.9776E-16:32:1:1:0:29 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:67:34:33:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:33:20:13:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:58:33:25:59:98.31%:99:2.4634E-33:24:1:0:1:59 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:31:18:13:32:96.88%:99:1.8007E-17:36:1:1:0:32 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:22:11:11:23:95.65%:99:2.9149E-12:37:1:0:1:23 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:20:12:8:21:95.24%:99:4.0873E-11:37:1:0:1:21 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 3278162 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|mas_Rv2940c|gene3001|transcript|Transcript_gene3001|Coding|1/1|c.4554C>T|p.Thr1518Thr|4554/6336|4554/6336|1518/2111||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3278162G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3278162G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:56 0/0:0:0:0:0:14:0%:25:1E0:46:14:8:6:14 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:48 0/0:0:0:0:0:22:0%:40:1E0:42:22:6:16:23 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:53:23:9:14:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:21:0%:40:1E0:48:21:7:14:21 0/0:0:0:0:0:46:0%:85:1E0:45:46:19:27:47 0/0:0:0:0:0:17:0%:33:1E0:49:17:5:12:17 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:18:0%:32:1E0:49:18:8:10:18 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:10:29:39 0/0:0:0:0:0:16:0%:29:1E0:46:16:10:6:16 0/0:0:0:0:0:49:0%:93:1E0:45:49:20:29:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:17:0%:33:1E0:45:17:12:5:18 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:13:0%:25:1E0:46:13:5:8:13 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:32 0/0:0:0:0:0:44:0%:81:1E0:44:44:15:29:44 0/0:0:0:0:0:56:0%:99:1E0:45:56:27:29:56 0/0:0:0:0:0:53:0%:99:1E0:47:53:22:31:53 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:38:1:0:1:32:3.12%:48:5E-1:42:31:14:17:32 0/0:0:0:0:0:47:0%:89:1E0:46:47:20:27:47 0/0:0:0:0:0:20:0%:36:1E0:45:20:14:6:20 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:18:0%:32:1E0:49:18:10:8:18 0/0:0:0:0:0:23:0%:44:1E0:46:23:7:16:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:47:0%:89:1E0:42:47:18:29:47 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:10:25:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:10:22:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:14:24:39 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:39:0%:74:1E0:47:39:14:25:39 0/0:0:0:0:0:57:0%:99:1E0:47:57:22:35:57 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:11:21:32 0/0:0:0:0:0:15:0%:29:1E0:49:15:6:9:15 0/0:0:0:0:0:12:0%:21:1E0:47:12:0:12:13 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:13:0%:25:1E0:51:13:6:7:13 0/0:0:0:0:0:32:0%:59:1E0:51:32:16:16:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:8:20:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:43:0%:82:1E0:45:43:17:26:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:16:0%:29:1E0:44:16:6:10:16 0/0:0:0:0:0:35:0%:67:1E0:47:35:10:25:35 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:58:0%:99:1E0:44:58:24:34:58 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:42 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:23 0/0:0:0:0:0:32:0%:59:1E0:47:32:10:22:32 0/0:60:1:1:0:36:2.78%:55:5E-1:42:35:15:20:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:15:0%:29:1E0:43:15:5:10:15 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:34 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:43 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:38 0/0:0:0:0:0:38:0%:70:1E0:45:38:12:26:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:65:0%:99:1E0:43:65:25:40:65 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:48 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:48:0%:89:1E0:40:48:18:30:48 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:19:27:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:10:22:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:26 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:7:19:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:31 0/0:33:1:1:0:26:3.85%:38:5E-1:40:25:8:17:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:39:1:1:0:59:1.69%:98:5E-1:41:58:23:35:59 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:40 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:45 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:35 0/0:0:0:0:0:42:0%:77:1E0:44:42:14:28:42 0/0:0:0:0:0:52:0%:96:1E0:44:52:23:29:52 0/0:0:0:0:0:31:0%:59:1E0:40:31:8:23:31 MTB_anc 3280352 . C A . PASS AC=14;AF=0.047;AN=300;ANN=A|missense_variant|MODERATE|mas_Rv2940c|gene3001|transcript|Transcript_gene3001|Coding|1/1|c.2364G>T|p.Gln788His|2364/6336|2364/6336|788/2111||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3280352C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3280352C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:49 0/0:37:1:1:0:16:6.25%:21:5E-1:46:15:6:9:18 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:45 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:32 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:23 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:25 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:26 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:47:0%:89:1E0:41:47:17:30:50 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:30 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:27 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:25 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:23 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:29 0/0:0:0:0:0:48:0%:89:1E0:43:48:29:19:51 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:29 0/0:37:1:1:0:37:2.7%:59:5E-1:43:36:18:18:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:0:0:0:0:18:0%:32:1E0:42:18:14:4:21 0/0:0:0:0:0:11:0%:22:1E0:43:11:4:7:12 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:28 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:35 0/0:0:0:0:0:49:0%:93:1E0:41:49:20:29:49 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:43 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:16:25:44 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:39:0%:74:1E0:38:39:14:25:40 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:23 0/0:0:0:0:0:31:0%:59:1E0:39:31:9:22:32 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:26 0/0:0:0:0:0:45:0%:85:1E0:41:45:15:30:50 0/0:0:0:0:0:32:0%:59:1E0:38:32:12:20:34 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:16 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:44 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:44 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:46 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:41 0/0:0:0:0:0:18:0%:32:1E0:49:18:8:10:19 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:36 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:18 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:30 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:10:23:33 0/0:0:0:0:0:50:0%:92:1E0:39:50:17:33:52 0/0:0:0:0:0:41:0%:78:1E0:37:41:21:20:42 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:22 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:16:0%:29:1E0:44:16:2:14:17 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:48:0%:89:1E0:37:48:23:25:50 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:51:0%:97:1E0:42:51:18:33:51 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:21 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:42:0%:77:1E0:38:42:21:21:44 1/1:41:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:31 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:15 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:37:1:0:1:34:2.94%:51:5E-1:45:33:16:17:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:33 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:36 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:0:0:0:0:54:0%:99:1E0:40:54:29:25:56 0/0:0:0:0:0:54:0%:99:1E0:40:54:26:28:55 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:35 0/0:0:0:0:0:26:0%:47:1E0:39:26:18:8:27 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:43 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:35 0/0:0:0:0:0:34:0%:62:1E0:37:34:16:18:36 0/0:0:0:0:0:46:0%:85:1E0:37:46:26:20:50 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:47 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:31 0/0:20:1:0:1:32:3.12%:48:5E-1:40:31:11:20:38 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:39 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:40 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:56:0%:99:1E0:37:56:26:30:61 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:35 0/0:0:0:0:0:31:0%:59:1E0:36:31:14:17:33 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:29 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:20 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:46 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:42 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:45 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:29 MTB_anc 3289923 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2944_Rv2944|gene3006|transcript|Transcript_gene3006|Coding|1/1|c.134C>A|p.Pro45His|134/717|134/717|45/238||,A|synonymous_variant|LOW|Rv2943A_Rv2943A|gene3005|transcript|Transcript_gene3005|Coding|1/1|c.219C>A|p.Ala73Ala|219/531|219/531|73/176||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3289923C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3289923C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:53:25:28:54:98.15%:99:2.2126E-30:38:1:1:0:55 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:37:17:20:38:97.37%:99:5.6582E-21:37:1:0:1:38 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:86:43:43:86:100%:99:2.7498E-51:0:0:0:0:86 1/1:40:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:37:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:38:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:68:34:34:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 MTB_anc 3291857 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|pks1_Rv2946c|gene3008|transcript|Transcript_gene3008|Coding|1/1|c.4497G>A|p.Ala1499Ala|4497/4851|4497/4851|1499/1616||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3291857C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3291857C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:11:0%:22:1E0:44:11:4:7:11 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:8:17:26 0/0:0:0:0:0:19:0%:37:1E0:47:19:6:13:19 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:14:0%:25:1E0:49:14:8:6:14 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:11:0%:22:1E0:47:11:5:6:12 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:43 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:39 0/0:0:0:0:0:16:0%:29:1E0:43:16:3:13:16 0/0:0:0:0:0:39:0%:74:1E0:44:39:12:27:40 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:45:0%:85:1E0:45:45:18:27:45 0/0:0:0:0:0:51:0%:97:1E0:43:51:19:32:51 0/0:34:1:0:1:32:3.12%:48:5E-1:42:31:12:19:32 0/0:0:0:0:0:41:0%:78:1E0:43:41:15:26:41 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:11:24:35 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:54:0%:99:1E0:41:54:18:36:56 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:10:28:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:35 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:18 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:0:0:0:0:44:0%:81:1E0:41:44:17:27:44 0/0:0:0:0:0:24:0%:44:1E0:39:24:4:20:27 0/0:0:0:0:0:47:0%:89:1E0:43:47:18:29:49 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:43 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:23 0/0:0:0:0:0:39:0%:74:1E0:41:39:13:26:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:9:23:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:9:21:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:15:0%:29:1E0:49:15:9:6:16 0/0:0:0:0:0:32:0%:59:1E0:42:32:9:23:33 0/0:0:0:0:0:45:0%:85:1E0:40:45:17:28:45 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:54:0%:99:1E0:43:54:25:29:54 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:43 0/0:0:0:0:0:25:0%:48:1E0:48:25:8:17:25 0/0:38:1:1:0:14:7.14%:17:5E-1:46:13:5:8:14 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:44 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:47:0%:89:1E0:38:47:16:31:47 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:10:24:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:21:0%:40:1E0:43:21:6:15:21 0/0:37:1:0:1:21:4.76%:31:5E-1:46:20:6:14:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:50:0%:92:1E0:39:50:20:30:51 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 0/0:0:0:0:0:50:0%:92:1E0:38:50:24:26:50 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:8:21:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:11:24:35 0/0:37:1:0:1:29:3.45%:45:5E-1:42:28:16:12:29 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:18 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:38:1:0:1:35:2.86%:55:5E-1:41:34:17:17:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:48:0%:89:1E0:44:48:17:31:48 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:26 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:39 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:12:26:38 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:22 0/0:0:0:0:0:48:0%:89:1E0:40:48:14:34:48 0/0:0:0:0:0:46:0%:85:1E0:39:46:16:30:48 0/0:0:0:0:0:20:0%:36:1E0:38:20:4:16:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:36 0/0:0:0:0:0:45:0%:85:1E0:40:45:11:34:46 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:11:29:41 0/0:0:0:0:0:38:0%:70:1E0:37:38:16:22:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:35 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:32 0/0:0:0:0:0:48:0%:89:1E0:38:48:21:27:49 0/0:0:0:0:0:29:0%:55:1E0:38:29:10:19:30 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:31 0/0:38:1:1:0:40:2.5%:62:5E-1:40:39:9:30:40 0/0:0:0:0:0:60:0%:99:1E0:38:60:20:40:61 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:13:26:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:6:18:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:10:25:36 0/0:0:0:0:0:34:0%:62:1E0:37:34:10:24:35 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:18 0/0:0:0:0:0:38:0%:70:1E0:39:38:15:23:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:9:28:37 0/0:0:0:0:0:51:0%:97:1E0:40:51:17:34:52 0/0:32:1:1:0:35:2.86%:55:5E-1:42:34:14:20:35 MTB_anc 3292782 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|pks1_Rv2946c|gene3008|transcript|Transcript_gene3008|Coding|1/1|c.3572C>A|p.Thr1191Lys|3572/4851|3572/4851|1191/1616||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3292782G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3292782G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:39:8:31:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:40:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:38:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:10:14:25:96%:99:2.0568E-13:33:1:1:0:27 1/1:37:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:35:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:36:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:36:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:28 1/1:35:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:24:6:18:24:100%:99:3.101E-14:0:0:0:0:27 1/1:37:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:36:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:24:10:14:24:100%:99:3.101E-14:0:0:0:0:28 1/1:35:35:6:29:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:24:5:19:24:100%:99:3.101E-14:0:0:0:0:28 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:25 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:28 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 MTB_anc 3296721 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|pks15_Rv2947c|gene3009|transcript|Transcript_gene3009|Coding|1/1|c.1120C>G|p.Arg374Gly|1120/1491|1120/1491|374/496||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3296721G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3296721G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:48:32:16:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:47:35:12:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:52:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:58:38:20:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:53:37:16:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:40:23:17:41:97.56%:99:9.3017E-24:0:0:0:0:43 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:34:18:16:35:97.14%:99:3.5146E-20:0:0:0:0:36 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:29:24:5:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:46:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 3302683 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|fadD29_Rv2950c-Rv2951c_Rv2951c|gene3012-gene3013|intergenic_region|gene3012-gene3013|||n.3302683T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:57:40:17:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:16:20:37:97.3%:99:2.1762E-20:39:1:1:0:37 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:28:15:13:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:36:29:7:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:29:25:4:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:47:35:12:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:48:32:16:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:49:31:18:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:65:36:29:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:49:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 3306864 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv2954c_Rv2954c|gene3016|transcript|Transcript_gene3016|Coding|1/1|c.528G>T|p.Met176Ile|528/726|528/726|176/241||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3306864C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3306864C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:44:59:27:32:59 0/0:0:0:0:0:29:0%:55:1E0:50:29:17:12:29 0/0:0:0:0:0:48:0%:89:1E0:45:48:27:21:49 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:37:1:0:1:18:5.56%:24:5E-1:47:17:7:10:18 0/0:60:1:0:1:30:3.33%:44:5E-1:50:29:16:13:30 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:10:22:32 0/0:0:0:0:0:44:0%:81:1E0:44:44:15:29:44 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:61:0%:99:1E0:46:61:28:33:61 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:24 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:54 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:17 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:23 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:47:38:24:14:38 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:58:0%:99:1E0:46:58:31:27:58 0/0:0:0:0:0:49:0%:93:1E0:45:49:27:22:49 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:49 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:20 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:27 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:47 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:33:1:0:1:37:2.7%:59:5E-1:48:36:16:20:37 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:48 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:55 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:32 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:47 0/0:0:0:0:0:23:0%:44:1E0:51:23:10:13:24 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:21 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:43 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:29 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 0/0:0:0:0:0:50:0%:92:1E0:47:50:29:21:50 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:31 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:37:0%:70:1E0:47:37:13:24:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:7:20:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:37:1:0:1:33:3.03%:52:5E-1:45:32:14:18:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:9:26:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:52:33:19:14:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:29:0%:55:1E0:51:29:11:18:30 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:44 0/0:0:0:0:0:35:0%:67:1E0:48:35:23:12:35 0/0:0:0:0:0:35:0%:67:1E0:51:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:58:0%:99:1E0:43:58:22:36:58 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:10:21:31 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:31 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:44 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:50 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:29 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:44 0/0:0:0:0:0:67:0%:99:1E0:44:67:22:45:68 0/0:38:1:0:1:65:1.54%:99:5E-1:44:64:34:30:65 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:16:0%:29:1E0:48:16:4:12:16 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:57:0%:99:1E0:42:57:26:31:58 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:51:0%:97:1E0:43:51:19:32:51 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:37 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:39 0/0:0:0:0:0:67:0%:99:1E0:41:67:32:35:67 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:41 0/0:0:0:0:0:50:0%:92:1E0:42:50:23:27:50 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:12:24:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:13:27:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:47 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:42 0/0:0:0:0:0:47:0%:89:1E0:38:47:23:24:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 MTB_anc 3309259 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|Rv2956_Rv2956|gene3018|transcript|Transcript_gene3018|Coding|1/1|c.592G>A|p.Gly198Ser|592/732|592/732|198/243||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3309259G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3309259G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 1/1:46:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:14:0%:25:1E0:45:14:5:9:14 0/0:0:0:0:0:29:0%:55:1E0:49:29:18:11:29 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:35:0%:67:1E0:50:35:12:23:37 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:23 0/0:0:0:0:0:48:0%:89:1E0:43:48:21:27:50 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:39:0%:74:1E0:52:39:21:18:40 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:42 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:16 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:17 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:46 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:49:0%:93:1E0:48:49:18:31:49 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:51:29:21:8:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:17:0%:33:1E0:48:17:4:13:17 0/0:0:0:0:0:21:0%:40:1E0:45:21:16:5:21 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:30:0%:55:1E0:51:30:14:16:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:23 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:39 0/0:0:0:0:0:36:0%:66:1E0:48:36:16:20:36 0/0:0:0:0:0:66:0%:99:1E0:47:66:30:36:66 0/0:0:0:0:0:53:0%:99:1E0:45:53:21:32:53 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:21:0%:40:1E0:44:21:17:4:21 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:54:0%:99:1E0:45:54:19:35:54 0/0:0:0:0:0:17:0%:33:1E0:51:17:9:8:18 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:8:19:27 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:41 0/0:0:0:0:0:19:0%:37:1E0:45:19:6:13:19 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 0/0:39:1:0:1:38:2.63%:58:5E-1:47:37:17:20:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:35 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:46 0/0:0:0:0:0:28:0%:51:1E0:51:28:10:18:29 0/0:0:0:0:0:14:0%:25:1E0:40:14:5:9:14 0/0:0:0:0:0:60:0%:99:1E0:46:60:37:23:60 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:33 0/0:0:0:0:0:30:0%:55:1E0:51:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:39 0/0:0:0:0:0:25:0%:48:1E0:52:25:17:8:25 0/0:0:0:0:0:32:0%:59:1E0:51:32:16:16:32 0/0:0:0:0:0:40:0%:74:1E0:48:40:22:18:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:39:0%:74:1E0:51:39:12:27:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:38:1:1:0:22:4.55%:31:5E-1:46:21:11:10:22 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:39 0/0:39:1:1:0:35:2.86%:55:5E-1:50:34:16:18:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:33 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:30 0/0:0:0:0:0:50:0%:92:1E0:43:50:22:28:50 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:46 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:41 0/0:0:0:0:0:23:0%:44:1E0:50:23:10:13:23 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:44 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:26:0%:47:1E0:46:26:8:18:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:41 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:33 0/0:0:0:0:0:16:0%:29:1E0:51:16:9:7:16 0/0:32:1:0:1:28:3.57%:41:5E-1:45:27:17:10:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:46:0%:85:1E0:45:46:21:25:46 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:38:1:0:1:37:2.7%:59:5E-1:40:36:20:16:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:34 0/0:0:0:0:0:46:0%:85:1E0:47:46:23:23:51 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:50:0%:92:1E0:40:50:21:29:51 0/0:0:0:0:0:63:0%:99:1E0:42:63:37:26:63 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:44:0%:81:1E0:41:44:16:28:44 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:44 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:54 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:38 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:47 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:46:0%:85:1E0:40:46:27:19:49 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:43 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:46 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:46 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:38 0/0:0:0:0:0:52:0%:96:1E0:41:52:24:28:52 0/0:0:0:0:0:63:0%:99:1E0:39:63:34:29:65 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:47 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:39 0/0:0:0:0:0:49:0%:93:1E0:43:49:21:28:49 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:45 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:20:12:32 0/0:0:0:0:0:62:0%:99:1E0:42:62:29:33:62 0/0:0:0:0:0:54:0%:99:1E0:43:54:24:30:55 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:42 MTB_anc 3311119 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv2958c_Rv2958c|gene3020|transcript|Transcript_gene3020|Coding|1/1|c.882G>C|p.Val294Val|882/1287|882/1287|294/428||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3311119C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3311119C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:51:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:49:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:43:18:25:44:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:63:30:33:63:100%:99:1.657E-37:0:0:0:0:64 1/1:41:67:34:33:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:63:26:37:65:96.92%:99:1.657E-37:0:0:0:0:65 1/1:43:39:18:21:40:97.5%:99:3.6742E-23:0:0:0:0:42 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 MTB_anc 3314002 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv2962c_Rv2962c|gene3024|transcript|Transcript_gene3024|Coding|1/1|c.1121T>C|p.Met374Thr|1121/1350|1121/1350|374/449||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3314002A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3314002A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:40:46:30:16:47 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:16 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:30 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:22 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:13 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:25 0/0:0:0:0:0:26:0%:47:1E0:42:26:20:6:26 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:22 0/0:0:0:0:0:33:0%:63:1E0:39:33:24:9:37 0/0:0:0:0:0:12:0%:21:1E0:48:12:8:4:12 0/0:0:0:0:0:50:0%:92:1E0:39:50:30:20:52 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:24 0/0:0:0:0:0:45:0%:85:1E0:39:45:25:20:47 0/0:0:0:0:0:18:0%:32:1E0:42:18:14:4:20 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:21 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:24 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:36 0/0:0:0:0:0:27:0%:52:1E0:40:27:21:6:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:33 0/0:0:0:0:0:28:0%:51:1E0:39:28:21:7:28 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:53 0/0:0:0:0:0:30:0%:55:1E0:37:30:21:9:32 0/0:0:0:0:0:51:0%:97:1E0:40:51:31:20:54 0/0:0:0:0:0:36:0%:66:1E0:38:36:23:13:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:21 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:30 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:32 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:43 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:22 0/0:0:0:0:0:27:0%:52:1E0:38:27:17:10:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:27 0/0:0:0:0:0:24:0%:44:1E0:38:24:19:5:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:20:8:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:24 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:56:0%:99:1E0:40:56:29:27:56 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:21:8:31 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:19 0/0:0:0:0:0:14:0%:25:1E0:40:14:10:4:15 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:50:0%:92:1E0:39:50:32:18:51 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:20 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:25:10:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:32 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:43:0%:82:1E0:40:43:28:15:46 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:28:0%:51:1E0:38:28:23:5:28 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:19 0/0:0:0:0:0:46:0%:85:1E0:41:46:32:14:46 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:21:10:31 0/0:0:0:0:0:35:0%:67:1E0:37:35:23:12:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:23:8:31 0/0:0:0:0:0:27:0%:52:1E0:37:27:16:11:27 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:21 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:25 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:27 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:32 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:25 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:23 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:30 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:23 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:24 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:36:0%:66:1E0:37:36:21:15:38 0/0:24:1:1:0:27:3.7%:41:5E-1:38:26:14:12:29 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:31 0/0:0:0:0:0:20:0%:36:1E0:38:20:16:4:21 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:26 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:22 0/0:0:0:0:0:22:0%:40:1E0:38:22:17:5:24 0/0:0:0:0:0:37:0%:70:1E0:38:37:22:15:39 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:23 0/0:0:0:0:0:24:0%:44:1E0:37:24:14:10:27 0/0:0:0:0:0:25:0%:48:1E0:36:25:14:11:27 0/0:0:0:0:0:42:0%:77:1E0:38:42:27:15:45 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:38 0/0:0:0:0:0:13:0%:25:1E0:41:13:6:7:14 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:35:0%:67:1E0:37:35:26:9:39 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:23:7:35 0/0:0:0:0:0:31:0%:59:1E0:37:31:21:10:32 0/0:0:0:0:0:38:0%:70:1E0:39:38:27:11:40 0/0:0:0:0:0:27:0%:52:1E0:38:27:17:10:28 0/0:0:0:0:0:32:0%:59:1E0:37:32:16:16:34 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:28 0/0:0:0:0:0:42:0%:77:1E0:37:42:27:15:44 0/0:0:0:0:0:27:0%:52:1E0:37:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:36:28:20:8:30 0/0:0:0:0:0:26:0%:47:1E0:38:26:17:9:29 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:30 0/0:0:0:0:0:42:0%:77:1E0:39:42:31:11:44 0/0:0:0:0:0:36:0%:66:1E0:38:36:25:11:36 0/0:0:0:0:0:29:0%:55:1E0:37:29:20:9:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:38 0/0:0:0:0:0:31:0%:59:1E0:38:31:19:12:33 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:22 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:41 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:41 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:28 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:27 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:39 0/0:0:0:0:0:38:0%:70:1E0:39:38:29:9:40 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:32 MTB_anc 3314412 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv2962c_Rv2962c|gene3024|transcript|Transcript_gene3024|Coding|1/1|c.711C>T|p.Ala237Ala|711/1350|711/1350|237/449||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3314412G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3314412G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:50:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:21:10:11:22:95.45%:99:1.0931E-11:60:1:1:0:23 1/1:48:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:51:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:45:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:53:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:22:10:12:23:95.65%:99:2.9149E-12:33:1:0:1:24 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:14:16:31:96.77%:99:6.8754E-17:39:1:0:1:31 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:52:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:37:13:24:38:97.37%:99:5.6582E-21:60:1:1:0:40 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:31:14:17:32:96.88%:99:1.8007E-17:31:1:1:0:32 1/1:41:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:63:31:32:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 3321448 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|synonymous_variant|LOW|pca_Rv2967c|gene3029|transcript|Transcript_gene3029|Coding|1/1|c.1599T>C|p.Asp533Asp|1599/3384|1599/3384|533/1127||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3321448A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3321448A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:46:46:15:31:47 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:47:0%:89:1E0:45:47:23:24:47 0/0:0:0:0:0:34:0%:62:1E0:48:34:15:19:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:35 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:39 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:66:0%:99:1E0:43:66:40:26:66 0/0:0:0:0:0:22:0%:40:1E0:51:22:11:11:22 0/0:0:0:0:0:57:0%:99:1E0:47:57:28:29:59 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:27:0%:52:1E0:50:27:11:16:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:52:0%:96:1E0:44:52:26:26:53 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:25 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:44 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:22 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:34:0%:62:1E0:49:34:14:20:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:14:22:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:40 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:35 0/0:0:0:0:0:63:0%:99:1E0:47:63:32:31:64 0/0:0:0:0:0:49:0%:93:1E0:46:49:28:21:49 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:50:0%:92:1E0:44:50:34:16:50 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:21 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:22 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:30 0/0:0:0:0:0:46:0%:85:1E0:45:46:20:26:47 0/0:0:0:0:0:52:0%:96:1E0:46:52:30:22:52 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:19 0/0:0:0:0:0:38:0%:70:1E0:46:38:13:25:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:46 0/0:0:0:0:0:20:0%:36:1E0:51:20:8:12:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:36 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:54:0%:99:1E0:42:54:26:28:54 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:49:0%:93:1E0:47:49:25:24:49 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:23:9:32 0/0:0:0:0:0:16:0%:29:1E0:45:16:5:11:16 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:38:0%:70:1E0:49:38:22:16:38 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:24 0/0:0:0:0:0:22:0%:40:1E0:50:22:15:7:22 0/0:0:0:0:0:24:0%:44:1E0:52:24:13:11:24 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:45:0%:85:1E0:46:45:21:24:46 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:18 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:35:0%:67:1E0:48:35:14:21:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:35 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:53:0%:99:1E0:42:53:32:21:54 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:56:0%:99:1E0:49:56:32:24:58 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:25:12:37 0/0:0:0:0:0:36:0%:66:1E0:45:36:14:22:36 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:44 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:45 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:38 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:42 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:58:0%:99:1E0:41:58:26:32:58 0/0:0:0:0:0:54:0%:99:1E0:42:54:25:29:54 0/0:0:0:0:0:28:0%:51:1E0:44:28:23:5:29 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:67:0%:99:1E0:39:67:40:27:68 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:54 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:40 0/0:0:0:0:0:47:0%:89:1E0:40:47:17:30:48 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:44 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:42 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:44 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:41 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:41:0%:78:1E0:40:41:28:13:43 0/0:0:0:0:0:56:0%:99:1E0:38:56:23:33:56 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:53:0%:99:1E0:44:53:30:23:53 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:37 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:48:0%:89:1E0:45:48:29:19:49 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 MTB_anc 3326554 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2971_Rv2971|gene3034|transcript|Transcript_gene3034|Coding|1/1|c.454C>A|p.His152Asn|454/849|454/849|152/282||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3326554C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3326554C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:46:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:61:33:28:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:29 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:45:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:53:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:35:14:21:36:97.22%:99:8.3613E-20:20:1:0:1:37 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:63:33:30:63:100%:99:1.657E-37:0:0:0:0:68 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:35:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:34:6:28:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:49:19:30:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:39 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 3331154 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|Rv2974c_Rv2974c|gene3037|transcript|Transcript_gene3037|Coding|1/1|c.208C>T|p.Leu70Leu|208/1413|208/1413|70/470||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3331154G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3331154G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:57:0%:99:1E0:38:57:26:31:57 0/0:0:0:0:0:11:0%:22:1E0:43:11:10:1:11 0/0:0:0:0:0:38:0%:70:1E0:37:38:14:24:38 0/0:0:0:0:0:16:0%:29:1E0:44:16:5:11:16 0/0:0:0:0:0:18:0%:32:1E0:41:18:5:13:18 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:22 0/0:60:1:1:0:17:5.88%:24:5E-1:42:16:5:11:17 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:21 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:29 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:11 0/0:0:0:0:0:32:0%:59:1E0:38:32:14:18:32 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:16 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:19 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:18 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:25:12:37 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:16 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:15:0%:29:1E0:44:15:4:11:15 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:27 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:14 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:24 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:37:33:17:16:36 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:16:7:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:24 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:34 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:19:0%:37:1E0:38:19:13:6:20 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:36:36:9:27:38 0/0:0:0:0:0:36:0%:66:1E0:37:36:14:22:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:15:0%:29:1E0:41:15:4:11:16 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:40 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:21 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:42:0%:77:1E0:38:42:17:25:43 0/0:0:0:0:0:22:0%:40:1E0:38:22:13:9:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:45:0%:85:1E0:37:45:19:26:46 0/0:38:1:0:1:27:3.7%:41:5E-1:41:26:13:13:27 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:34 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:48 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:39 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:21 0/0:0:0:0:0:14:0%:25:1E0:44:14:7:7:14 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:8:10:19 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:27 0/0:37:1:1:0:25:4%:38:5E-1:40:24:9:15:26 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:31 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:30 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:13:0%:25:1E0:45:13:8:5:13 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:0:0:0:0:45:0%:85:1E0:36:45:15:30:45 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:23 0/0:0:0:0:0:34:0%:62:1E0:37:34:17:17:34 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:23 0/0:0:0:0:0:30:0%:55:1E0:38:30:15:15:32 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:31 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:23 0/0:0:0:0:0:17:0%:33:1E0:41:17:5:12:17 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:23 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:26 0/0:0:0:0:0:30:0%:55:1E0:36:30:11:19:30 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:36:25:14:11:26 0/0:0:0:0:0:42:0%:77:1E0:35:42:20:22:43 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:18:0%:32:1E0:36:18:6:12:18 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:33 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:42 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:15:0%:29:1E0:37:15:2:13:15 0/0:0:0:0:0:33:0%:63:1E0:37:33:20:13:37 0/0:0:0:0:0:33:0%:63:1E0:36:33:12:21:35 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:24 0/0:0:0:0:0:37:0%:70:1E0:35:37:10:27:39 0/0:0:0:0:0:36:0%:66:1E0:36:36:13:23:37 0/0:0:0:0:0:30:0%:55:1E0:36:30:11:19:33 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:35 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:26 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:23 0/0:0:0:0:0:21:0%:40:1E0:35:21:13:8:23 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:43:0%:82:1E0:35:43:17:26:45 0/0:0:0:0:0:32:0%:59:1E0:35:32:13:19:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:30 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:40 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:16 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:39:0%:74:1E0:38:39:14:25:39 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 MTB_anc 3335708 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv2979c_Rv2979c|gene3043|transcript|Transcript_gene3043|Coding|1/1|c.41G>C|p.Arg14Pro|41/585|41/585|14/194||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3335708C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3335708C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:51:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:51:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:26:13:13:27:96.3%:99:1.4382E-14:60:1:1:0:28 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:11:13:25:96%:99:2.0568E-13:60:1:0:1:27 1/1:46:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:46:12:34:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:51:36:16:20:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:49:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:22:9:13:23:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:62:23:39:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 3336506 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|intergenic_region|MODIFIER|Rv2980_Rv2980-ddlA_Rv2981c|gene3044-gene3045|intergenic_region|gene3044-gene3045|||n.3336506T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:48 0/0:0:0:0:0:13:0%:25:1E0:53:13:4:9:15 0/0:0:0:0:0:38:0%:70:1E0:45:37:17:20:38 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:13 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:21 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:27:0%:47:1E0:44:26:17:9:28 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:17 0/0:0:0:0:0:17:0%:33:1E0:47:17:11:6:18 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:23 0/0:0:0:0:0:11:0%:22:1E0:42:11:8:3:11 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:32 0/0:0:0:0:0:13:0%:25:1E0:41:13:7:6:13 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:18 0/0:0:0:0:0:20:0%:37:1E0:40:19:13:6:21 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:12:0%:21:1E0:46:12:6:6:12 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:15 0/0:0:0:0:0:16:0%:29:1E0:40:16:12:4:16 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:39 0/0:0:0:0:0:22:0%:40:1E0:45:21:12:9:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:28 0/0:0:0:0:0:42:0%:77:1E0:38:42:22:20:43 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:28 0/0:0:0:0:0:13:0%:25:1E0:41:13:8:5:14 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:27 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:29:0%:51:1E0:42:28:17:11:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:19:0%:37:1E0:46:19:6:13:19 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:48:0%:89:1E0:46:48:23:25:49 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:30 0/0:0:0:0:0:38:0%:66:1E0:44:36:16:20:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:38 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:43 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:37 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:48 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:36 0/0:0:0:0:0:29:0%:51:1E0:44:28:11:17:30 0/0:0:0:0:0:13:0%:25:1E0:48:13:7:6:13 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:44 0/0:0:0:0:0:28:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:40 0/0:0:0:0:0:28:0%:47:1E0:41:26:12:14:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:23:0%:40:1E0:43:22:8:14:25 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:27 0/0:0:0:0:0:53:0%:99:1E0:44:53:31:22:54 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:38 0/0:0:0:0:0:23:0%:44:1E0:44:23:17:6:23 0/0:0:0:0:0:18:0%:29:1E0:46:16:11:5:18 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:19 0/0:0:0:0:0:18:0%:29:1E0:49:16:6:10:19 0/0:0:0:0:0:16:0%:29:1E0:49:16:12:4:17 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:19 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:29 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:36:0%:62:1E0:42:34:18:16:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:28 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:13:0%:25:1E0:42:13:7:6:14 0/0:0:0:0:0:22:0%:40:1E0:44:22:16:6:23 0/0:0:0:0:0:21:0%:40:1E0:41:21:16:5:21 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:17 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:24 0/0:0:0:0:0:18:0%:29:1E0:48:16:10:6:19 0/0:0:0:0:0:28:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:19:0%:32:1E0:43:18:7:11:19 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:31 0/0:0:0:0:0:34:0%:63:1E0:41:33:22:11:35 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:19 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:30 0/0:0:0:0:0:31:0%:55:1E0:43:30:14:16:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:24:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:15 0/0:0:0:0:0:29:0%:51:1E0:45:28:11:17:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:29 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:48 0/0:0:0:0:0:19:0%:37:1E0:38:19:13:6:19 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:29 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:22 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:31 0/0:0:0:0:0:25:0%:44:1E0:39:24:10:14:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:28 0/0:0:0:0:0:20:0%:36:1E0:42:20:7:13:20 0/0:0:0:0:0:29:0%:55:1E0:36:29:19:10:32 0/0:0:0:0:0:43:0%:77:1E0:40:42:25:17:43 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:46 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:20 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:25 0/0:0:0:0:0:20:0%:36:1E0:35:20:9:11:22 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:32 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:26 0/0:0:0:0:0:36:0%:66:1E0:36:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:34 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:32 0/0:0:0:0:0:16:0%:29:1E0:39:16:9:7:19 0/0:0:0:0:0:29:0%:55:1E0:37:29:18:11:30 0/0:0:0:0:0:19:0%:37:1E0:40:19:4:15:21 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:22 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:15 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:45:0%:85:1E0:38:45:25:20:49 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:42 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:41 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:19:0%:37:1E0:41:19:14:5:20 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:29 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:26 0/0:0:0:0:0:12:0%:21:1E0:44:12:2:10:12 0/0:0:0:0:0:29:0%:55:1E0:38:29:19:10:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:43 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 MTB_anc 3336587 . T A . PASS AC=20;AF=0.071;AN=280;ANN=A|intergenic_region|MODIFIER|Rv2980_Rv2980-ddlA_Rv2981c|gene3044-gene3045|intergenic_region|gene3044-gene3045|||n.3336587T>A||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:33:9:3:6:36:25%:29:1.1061E-3:36:27:2:25:37 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 0/0:35:6:0:6:29:20.69%:18:1.1736E-2:38:23:6:17:32 0/0:26:2:2:0:9:22.22%:7:2.3529E-1:36:7:0:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:41:4:1:3:13:30.77%:6:4.7826E-2:36:9:2:7:13 0/0:33:3:2:1:13:23.08%:9:1.1E-1:38:10:4:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:1:1:0:8:12.5%:8:5E-1:36:7:3:4:8 0/0:32:5:2:3:20:25%:10:2.3562E-2:38:15:3:12:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:32:6:2:4:25:24%:14:1.1145E-2:36:19:7:12:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:34:3:1:2:22:13.64%:19:1.1628E-1:35:19:7:12:24 0/0:26:1:0:1:8:12.5%:8:5E-1:34:7:0:7:9 0/0:33:4:2:2:10:40%:3:4.3344E-2:36:6:3:3:11 0/0:35:3:1:2:12:25%:6:1.087E-1:33:9:2:7:12 0/0:33:1:0:1:9:11.11%:11:5E-1:39:8:3:5:10 0/0:34:4:0:4:10:40%:3:4.3344E-2:37:6:1:5:10 0/0:35:3:1:2:9:33.33%:4:1.0294E-1:34:6:2:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:2:1:1:24:8.33%:27:2.4468E-1:35:22:6:16:24 0/0:0:0:0:0:11:0%:22:1E0:41:11:4:7:11 0/0:31:1:0:1:19:5.26%:28:5E-1:37:18:4:14:19 0/0:33:4:2:2:16:25%:8:5.0612E-2:36:12:4:8:18 0/0:36:3:0:3:14:21.43%:9:1.1111E-1:37:11:3:8:14 0/0:34:3:0:3:10:30%:4:1.0526E-1:35:7:1:6:10 0/0:44:3:0:3:18:16.67%:14:1.1429E-1:39:15:5:10:18 0/0:34:2:1:1:11:18.18%:10:2.381E-1:40:9:3:6:13 0/0:29:4:2:2:15:26.67%:8:4.9808E-2:37:11:2:9:15 0/0:34:4:2:2:15:26.67%:8:4.9808E-2:38:11:5:6:17 0/0:30:2:0:2:17:11.76%:18:2.4242E-1:36:15:3:12:18 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:34:6:1:5:9 0/0:26:1:0:1:12:8.33%:14:5E-1:39:11:3:8:12 0/0:42:4:1:3:14:28.57%:6:4.8889E-2:32:10:5:5:15 0/0:33:3:1:2:19:15.79%:17:1.1486E-1:37:16:3:13:20 0/0:32:2:1:1:29:7.14%:34:2.4545E-1:36:26:4:22:29 0/0:31:6:0:6:30:20%:18:1.186E-2:35:24:6:18:31 0/0:33:5:1:4:23:21.74%:14:2.4548E-2:36:18:2:16:23 0/0:33:3:0:3:22:13.64%:19:1.1628E-1:36:19:5:14:23 0/0:33:4:1:3:21:19.05%:15:5.3471E-2:36:17:5:12:21 0/1:35:8:2:6:27:29.63%:26:2.1337E-3:38:19:7:12:27 0/0:36:2:1:1:18:11.11%:18:2.4286E-1:35:16:5:11:19 0/0:32:4:2:2:16:25%:8:5.0612E-2:35:12:5:7:16 0/0:36:2:0:2:20:10%:21:2.4359E-1:37:18:7:11:21 0/0:33:5:2:3:25:20%:17:2.5076E-2:36:20:4:16:28 0/0:32:3:0:3:14:21.43%:9:1.1111E-1:35:11:5:6:15 0/0:34:3:2:1:12:25%:6:1.087E-1:35:9:2:7:12 0/1:32:7:3:4:17:41.18%:24:3.6151E-3:36:10:4:6:18 0/0:33:4:1:3:20:20%:13:5.3015E-2:37:16:4:12:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:33:6:2:4:26:23.08%:13:1.1309E-2:36:20:5:15:26 0/0:26:1:0:1:16:6.25%:21:5E-1:36:15:4:11:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:5:3:2:17:29.41%:8:2.2239E-2:38:12:4:8:17 0/1:30:7:4:3:23:30.43%:23:4.5803E-3:35:16:4:12:23 0/0:32:1:0:1:15:6.67%:21:5E-1:34:14:3:11:15 0/0:33:5:1:4:14:35.71%:4:2.037E-2:37:9:1:8:16 0/0:34:3:2:1:29:10.34%:31:1.1842E-1:36:26:5:21:29 0/0:30:2:2:0:20:10%:21:2.4359E-1:38:18:4:14:21 0/0:34:4:1:3:14:28.57%:6:4.8889E-2:39:10:2:8:15 0/0:37:3:1:2:19:15.79%:17:1.1486E-1:37:16:6:10:21 0/0:37:1:0:1:17:5.88%:24:5E-1:36:16:1:15:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:11:3:8:20:55%:41:7.2653E-5:36:9:5:4:20 0/1:37:12:6:6:36:33.33%:40:8.1472E-5:39:24:10:14:37 0/0:36:3:1:2:14:21.43%:9:1.1111E-1:36:11:4:7:16 0/1:34:10:0:10:29:34.48%:34:3.8387E-4:38:19:6:13:31 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:12 0/0:33:2:2:0:8:25%:5:2.3333E-1:44:6:3:3:9 0/0:34:5:2:3:21:23.81%:12:2.3921E-2:38:16:7:9:21 0/0:37:1:0:1:11:9.09%:14:5E-1:45:10:4:6:12 0/0:32:2:0:2:10:20%:7:2.3684E-1:37:8:3:5:12 0/0:26:1:0:1:11:9.09%:14:5E-1:39:10:4:6:11 0/0:33:4:2:2:17:23.53%:11:5.132E-2:36:13:4:9:17 0/0:38:1:0:1:12:8.33%:14:5E-1:39:11:3:8:13 0/0:37:1:0:1:20:5%:27:5E-1:37:19:6:13:21 0/0:39:5:2:3:24:20.83%:14:2.4823E-2:36:19:9:10:26 0/0:34:3:3:0:18:16.67%:14:1.1429E-1:35:15:3:12:18 0/0:33:3:1:2:23:13.04%:22:1.1667E-1:38:20:6:14:23 0/0:29:3:2:1:15:20%:11:1.1207E-1:36:12:2:10:17 0/0:31:6:1:5:26:23.08%:13:1.1309E-2:35:20:5:15:27 0/0:32:5:0:5:16:31.25%:6:2.1691E-2:37:11:2:9:17 0/0:35:2:1:1:20:10%:21:2.4359E-1:37:18:6:12:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:1:1:0:15:6.67%:21:5E-1:40:14:7:7:15 0/0:34:4:0:4:12:33.33%:4:4.6584E-2:35:8:1:7:13 0/0:0:0:0:0:7:0%:14:1E0:37:7:0:7:8 0/0:29:5:0:5:14:35.71%:4:2.037E-2:37:9:4:5:15 0/0:34:2:0:2:12:16.67%:10:2.3913E-1:35:10:5:5:13 0/0:32:3:1:2:19:15.79%:17:1.1486E-1:38:16:5:11:24 0/0:37:3:0:3:15:20%:11:1.1207E-1:38:12:2:10:16 0/0:35:3:0:3:19:15.79%:17:1.1486E-1:36:16:1:15:20 0/0:33:6:2:4:24:25%:11:1.0968E-2:36:18:6:12:25 0/0:37:6:1:5:21:28.57%:9:1.0344E-2:38:15:5:10:23 0/0:29:3:1:2:12:25%:6:1.087E-1:35:9:3:6:15 0/0:37:1:0:1:10:10%:11:5E-1:36:9:0:9:10 0/1:31:7:2:5:19:36.84%:23:3.9926E-3:36:12:3:9:19 0/0:29:3:1:2:17:17.65%:14:1.1364E-1:35:14:2:12:18 0/0:34:4:1:3:23:17.39%:18:5.4264E-2:38:19:3:16:23 0/0:33:4:1:3:17:23.53%:11:5.132E-2:36:13:6:7:17 0/0:35:4:0:4:22:18.18%:15:5.3885E-2:36:18:6:12:24 0/0:34:5:3:2:19:26.32%:10:2.3166E-2:35:14:2:12:20 0/0:34:2:0:2:16:12.5%:15:2.4194E-1:35:14:2:12:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:4:0:4:23:17.39%:18:5.4264E-2:38:19:5:14:25 0/0:26:1:0:1:11:9.09%:14:5E-1:36:10:5:5:15 0/0:30:4:1:3:22:18.18%:15:5.3885E-2:35:18:4:14:22 0/0:34:2:0:2:14:14.29%:12:2.4074E-1:36:12:5:7:14 0/1:31:7:1:6:35:20%:22:5.6095E-3:36:28:9:19:36 0/0:32:4:0:4:14:28.57%:6:4.8889E-2:40:10:3:7:18 0/0:37:1:0:1:19:5.26%:28:5E-1:36:18:5:13:20 0/0:32:1:1:0:13:7.69%:18:5E-1:37:12:2:10:13 0/0:33:3:1:2:15:20%:11:1.1207E-1:37:12:4:8:16 0/0:0:0:0:0:11:0%:22:1E0:37:11:1:10:14 0/0:36:2:0:2:17:11.76%:18:2.4242E-1:34:15:1:14:18 0/0:33:5:2:3:20:25%:10:2.3562E-2:35:15:2:13:24 0/0:33:4:0:4:17:23.53%:11:5.132E-2:36:13:3:10:17 0/1:34:6:3:3:19:31.58%:20:9.828E-3:35:13:3:10:19 0/0:35:4:0:4:23:17.39%:18:5.4264E-2:38:19:3:16:28 0/0:33:5:1:4:34:14.71%:27:2.6693E-2:35:29:9:20:37 0/1:33:6:2:4:17:35.29%:20:9.2021E-3:36:11:1:10:18 0/0:32:1:0:1:16:6.25%:21:5E-1:35:15:0:15:16 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:31:4:1:3:18:22.22%:10:5.1948E-2:37:14:5:9:19 0/0:30:3:0:3:12:25%:6:1.087E-1:36:9:1:8:15 0/0:24:1:0:1:17:5.88%:24:5E-1:35:16:0:16:18 0/0:35:2:0:2:16:12.5%:15:2.4194E-1:34:14:3:11:17 0/1:32:8:1:7:20:40%:27:1.638E-3:35:12:4:8:22 0/0:35:4:0:4:15:26.67%:8:4.9808E-2:36:11:2:9:16 0/0:33:5:1:4:14:35.71%:4:2.037E-2:35:9:1:8:14 0/0:36:3:2:1:12:25%:6:1.087E-1:36:9:1:8:13 0/0:35:2:1:1:13:15.38%:13:2.4E-1:36:11:0:11:13 0/0:35:1:0:1:11:9.09%:14:5E-1:35:10:2:8:11 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:8 0/1:31:8:1:7:27:29.63%:26:2.1337E-3:35:19:6:13:29 0/1:34:7:3:4:36:19.44%:22:5.6667E-3:36:29:7:22:37 0/1:33:8:1:7:18:44.44%:28:1.4461E-3:37:10:2:8:19 0/1:34:7:3:4:24:29.17%:23:4.7006E-3:36:17:5:12:25 0/1:32:7:2:5:32:21.88%:22:5.4182E-3:35:25:7:18:33 0/0:34:3:0:3:15:20%:11:1.1207E-1:35:12:3:9:16 0/0:29:4:1:3:11:36.36%:4:4.5113E-2:35:7:1:6:12 0/0:35:3:1:2:21:14.29%:19:1.1585E-1:34:18:5:13:23 0/1:32:8:0:8:24:33.33%:27:1.949E-3:38:16:3:13:25 0/0:26:3:0:3:13:23.08%:9:1.1E-1:36:10:5:5:14 0/0:0:0:0:0:8:0%:14:1E0:37:8:1:7:8 0/1:34:8:0:8:20:40%:27:1.638E-3:36:12:1:11:24 0/0:32:3:0:3:18:16.67%:14:1.1429E-1:37:15:5:10:18 0/1:35:7:2:5:22:31.82%:23:4.4505E-3:37:15:4:11:25 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:16 MTB_anc 3336620 . TA T . PASS AC=1;AF=3.497e-03;AN=286;ANN=T|intergenic_region|MODIFIER|Rv2980_Rv2980-ddlA_Rv2981c|gene3044-gene3045|intergenic_region|gene3044-gene3045|||n.3336621delA||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:4:2:2:30:13.33%:26:5.62E-2:37:26:3:23:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:1:0:31:3.23%:48:5E-1:37:30:6:24:32 0/0:0:0:0:0:8:0%:14:1E0:38:8:2:6:8 0/0:37:1:0:1:13:7.69%:18:5E-1:36:12:0:12:14 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:13 0/0:0:0:0:0:13:0%:25:1E0:37:13:7:6:15 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:9 0/0:38:1:1:0:7:14.29%:8:5E-1:38:6:3:3:7 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:37:15:2:13:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:7:1:6:24:29.17%:23:4.7006E-3:37:17:5:12:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:31:4:0:4:26:14.81%:23:5.5494E-2:37:23:9:14:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:2:1:11:27.27%:7:1.0714E-1:35:8:3:5:11 0/0:37:1:0:1:10:10%:11:5E-1:37:9:3:6:10 0/0:37:1:0:1:8:12.5%:8:5E-1:38:7:3:4:8 0/0:37:1:0:1:12:8.33%:14:5E-1:36:11:1:10:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:23 0/0:37:1:0:1:14:7.14%:17:5E-1:36:13:4:9:14 0/0:37:2:0:2:14:14.29%:12:2.4074E-1:37:12:2:10:14 0/0:28:3:2:1:18:15.79%:17:1.1486E-1:37:16:4:12:19 0/0:60:1:1:0:10:10%:11:5E-1:37:9:2:7:10 0/0:37:1:0:1:8:12.5%:8:5E-1:36:7:0:7:9 0/0:37:1:0:1:16:6.25%:21:5E-1:37:15:4:11:17 0/0:37:1:0:1:14:7.14%:17:5E-1:36:13:5:8:14 0/0:0:0:0:0:20:0%:36:1E0:39:20:4:16:20 0/0:38:2:1:1:14:14.29%:12:2.4074E-1:37:12:4:8:14 0/0:38:1:1:0:18:5.56%:24:5E-1:39:17:2:15:18 0/0:37:2:0:2:8:25%:5:2.3333E-1:40:6:1:5:9 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 0/0:36:4:1:3:16:25%:8:5.0612E-2:37:12:4:8:16 0/0:37:2:0:2:18:11.11%:18:2.4286E-1:37:16:3:13:18 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:25 0/0:25:4:0:4:28:13.33%:26:5.62E-2:37:26:5:21:31 0/0:37:1:0:1:20:5%:27:5E-1:36:19:3:16:20 0/0:28:2:0:2:25:8%:31:2.449E-1:36:23:4:19:26 0/0:32:4:0:4:16:25%:8:5.0612E-2:36:12:2:10:17 0/0:37:1:1:0:20:5%:27:5E-1:37:19:4:15:22 0/0:25:2:0:2:18:10.53%:21:2.4324E-1:36:17:4:13:19 0/0:43:4:1:3:17:23.53%:11:5.132E-2:37:13:3:10:19 0/0:37:1:0:1:21:4.76%:31:5E-1:37:20:5:15:22 0/0:35:4:1:3:27:14.81%:23:5.5494E-2:37:23:5:18:27 0/0:36:4:1:3:13:30.77%:4:4.6584E-2:37:8:1:7:13 0/0:37:1:0:1:13:7.69%:18:5E-1:37:12:3:9:14 0/0:37:2:0:2:21:9.52%:25:2.439E-1:37:19:7:12:21 0/0:37:1:0:1:16:6.25%:21:5E-1:37:15:3:12:17 0/0:37:1:0:1:10:10%:11:5E-1:36:9:1:8:10 0/0:36:3:1:2:29:10.34%:31:1.1842E-1:37:26:6:20:32 0/0:38:2:1:1:14:14.29%:12:2.4074E-1:37:12:3:9:14 0/0:33:1:0:1:11:9.09%:14:5E-1:37:10:1:9:11 0/0:33:2:1:1:16:12.5%:15:2.4194E-1:37:14:6:8:16 0/0:37:1:0:1:23:4.35%:34:5E-1:37:22:7:15:23 0/0:37:1:0:1:16:6.25%:21:5E-1:36:15:1:14:17 0/0:37:3:0:3:18:16.67%:14:1.1429E-1:36:15:3:12:19 0/0:0:0:0:0:25:0%:48:1E0:37:25:5:20:26 0/0:34:1:1:0:21:4.76%:31:5E-1:38:20:6:14:22 0/0:37:1:0:1:18:5.56%:24:5E-1:37:17:4:13:18 0/0:37:1:0:1:17:5.88%:24:5E-1:37:16:7:9:17 0/0:31:2:0:2:18:11.11%:18:2.4286E-1:38:16:2:14:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:2:1:21:14.29%:19:1.1585E-1:35:18:6:12:21 0/0:34:4:1:3:38:10.53%:37:5.7534E-2:36:34:13:21:39 0/0:33:1:0:1:16:6.25%:21:5E-1:39:15:4:11:17 0/0:36:6:1:5:27:22.22%:16:1.1461E-2:37:21:4:17:30 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:37:7:2:5:9 0/0:37:2:0:2:10:20%:7:2.3684E-1:37:8:4:4:10 0/0:37:4:0:4:23:17.39%:18:5.4264E-2:37:19:9:10:23 0/0:0:0:0:0:7:0%:14:1E0:34:7:2:5:7 0/0:37:3:0:3:13:23.08%:9:1.1E-1:36:10:4:6:13 0/0:37:1:0:1:9:11.11%:11:5E-1:37:8:3:5:9 0/0:0:0:0:0:17:0%:33:1E0:37:17:4:13:17 0/0:35:2:0:2:10:20%:7:2.3684E-1:37:8:1:7:11 0/0:49:2:1:1:22:9.09%:24:2.4419E-1:37:20:5:15:23 0/0:37:2:0:2:19:10.53%:21:2.4324E-1:39:17:7:10:20 0/0:37:1:0:1:17:5.88%:24:5E-1:37:16:4:12:18 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:21 0/0:32:5:1:4:18:26.32%:10:2.3166E-2:37:14:3:11:19 0/0:37:2:0:2:24:8.33%:27:2.4468E-1:37:22:6:16:24 0/0:0:0:0:0:18:0%:32:1E0:37:18:3:15:18 0/0:37:1:0:1:16:6.25%:21:5E-1:37:15:3:12:16 0/0:33:1:0:1:7:14.29%:8:5E-1:36:6:3:3:7 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:15 0/0:37:1:0:1:12:8.33%:14:5E-1:36:11:1:10:13 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:9 0/0:37:1:0:1:12:8.33%:14:5E-1:36:11:5:6:13 0/0:33:3:0:3:10:30%:4:1.0526E-1:37:7:2:5:11 0/0:37:6:1:5:26:23.08%:13:1.1309E-2:36:20:6:14:28 0/0:35:3:0:3:17:17.65%:14:1.1364E-1:38:14:2:12:17 0/0:37:2:0:2:21:9.52%:25:2.439E-1:37:19:2:17:23 0/0:37:1:0:1:23:4.35%:34:5E-1:37:22:5:17:23 0/0:37:4:1:3:28:14.29%:23:5.5746E-2:36:24:4:20:29 0/0:37:4:1:3:17:23.53%:11:5.132E-2:37:13:3:10:19 0/0:0:0:0:0:7:0%:14:1E0:38:7:0:7:8 0/0:36:3:1:2:20:15%:16:1.1538E-1:36:17:2:15:20 0/0:37:1:0:1:12:8.33%:14:5E-1:36:11:1:10:13 0/0:0:0:0:0:19:0%:37:1E0:37:19:3:16:19 0/0:37:3:0:3:16:18.75%:11:1.129E-1:37:13:4:9:17 0/0:37:3:0:3:20:15%:16:1.1538E-1:37:17:4:13:21 0/0:37:1:0:1:17:5.88%:24:5E-1:37:16:4:12:18 0/0:0:0:0:0:18:0%:32:1E0:37:18:2:16:18 0/0:32:1:1:0:7:14.29%:8:5E-1:36:6:1:5:9 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:18 0/0:34:3:1:2:15:20%:11:1.1207E-1:36:12:4:8:15 0/0:37:2:0:2:20:10%:21:2.4359E-1:37:18:5:13:20 0/0:0:0:0:0:14:0%:25:1E0:36:14:3:11:15 0/0:0:0:0:0:28:0%:51:1E0:37:28:8:20:28 0/0:0:0:0:0:17:0%:33:1E0:37:17:3:14:18 0/0:0:0:0:0:17:0%:33:1E0:36:17:4:13:18 0/0:0:0:0:0:10:0%:17:1E0:38:10:2:8:10 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:20 0/0:33:1:1:0:13:7.69%:18:5E-1:38:12:2:10:13 0/0:37:1:0:1:19:5.26%:28:5E-1:36:18:0:18:21 0/0:34:4:0:4:19:21.05%:13:5.251E-2:37:15:3:12:19 0/0:31:1:1:0:17:5.88%:24:5E-1:37:16:2:14:17 0/0:38:2:2:0:17:11.76%:18:2.4242E-1:36:15:1:14:17 0/0:39:2:2:0:26:7.69%:30:2.451E-1:37:24:4:20:26 0/0:36:2:1:1:34:5.88%:43:2.4627E-1:37:32:7:25:35 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:16 0/0:37:1:0:1:15:6.67%:21:5E-1:37:14:0:14:15 0/0:37:3:0:3:12:25%:6:1.087E-1:37:9:1:8:12 0/0:33:1:0:1:19:5.26%:28:5E-1:35:18:3:15:19 0/0:35:3:0:3:18:16.67%:14:1.1429E-1:36:15:1:14:18 0/0:37:1:0:1:17:5.88%:24:5E-1:37:16:0:16:17 0/0:0:0:0:0:12:0%:21:1E0:36:12:1:11:12 0/0:0:0:0:0:21:0%:40:1E0:37:21:4:17:22 0/0:37:1:0:1:19:5.26%:28:5E-1:37:18:2:16:19 0/0:0:0:0:0:15:0%:29:1E0:36:15:1:14:15 0/0:0:0:0:0:14:0%:25:1E0:36:14:2:12:17 0/0:24:1:0:1:11:9.09%:14:5E-1:35:10:1:9:11 0/0:37:1:0:1:7:14.29%:8:5E-1:37:6:0:6:8 0/0:0:0:0:0:7:0%:14:1E0:37:7:0:7:7 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:27 0/0:37:3:0:3:37:8.11%:43:1.1986E-1:37:34:8:26:40 0/0:37:3:0:3:17:17.65%:14:1.1364E-1:37:14:2:12:17 0/0:37:4:1:3:25:16%:21:5.4928E-2:37:21:6:15:25 0/0:37:3:1:2:29:10.34%:31:1.1842E-1:37:26:6:20:29 0/0:37:3:0:3:14:21.43%:9:1.1111E-1:37:11:2:9:14 0/0:35:2:1:1:14:14.29%:12:2.4074E-1:36:12:1:11:17 0/0:37:2:0:2:21:9.52%:25:2.439E-1:37:19:4:15:22 0/0:37:2:0:2:26:7.69%:30:2.451E-1:37:24:3:21:26 0/0:37:1:0:1:15:6.67%:21:5E-1:37:14:3:11:15 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:35:3:0:3:26:11.54%:25:1.1765E-1:36:23:2:21:26 0/0:37:2:1:1:18:11.11%:18:2.4286E-1:36:16:4:12:19 0/0:37:4:3:1:24:16.67%:18:5.461E-2:37:20:2:18:24 0/0:37:1:0:1:13:7.69%:18:5E-1:37:12:2:10:14 MTB_anc 3336646 . T A . PASS AC=223;AF=0.791;AN=282;ANN=A|intergenic_region|MODIFIER|Rv2980_Rv2980-ddlA_Rv2981c|gene3044-gene3045|intergenic_region|gene3044-gene3045|||n.3336646T>A||||||;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:26:5:21:29:89.66%:99:1.6496E-13:35:3:1:2:29 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:28:9:19:30:93.33%:99:4.194E-15:37:2:0:2:33 0/1:35:8:2:6:9:88.89%:36:2.0568E-4:38:1:0:1:9 0/1:37:9:0:9:14:64.29%:35:2.8986E-4:33:5:0:5:14 0/1:37:10:2:8:12:83.33%:44:3.3652E-5:33:2:0:2:12 0/1:35:13:7:6:16:81.25%:57:1.6121E-6:32:3:0:3:16 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 0/1:34:7:3:4:8:87.5%:31:6.993E-4:38:1:0:1:8 0/1:36:13:2:11:15:86.67%:60:8.7675E-7:38:2:0:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 0/1:33:7:0:7:8:87.5%:31:6.993E-4:31:1:0:1:8 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 0/1:38:6:2:4:8:75%:24:3.4965E-3:28:2:0:2:9 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:12:1:11:13:92.31%:58:1.3461E-6:34:1:0:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:14:2:12:16:87.5%:65:2.5454E-7:34:2:0:2:18 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:15:4:11:16:93.75%:75:2.8282E-8:32:1:0:1:17 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:18:3:15:20:90%:87:1.6758E-9:37:2:0:2:21 1/1:35:13:5:8:15:92.86%:64:3.7391E-7:31:1:0:1:16 1/1:37:16:3:13:17:94.12%:81:7.7134E-9:34:1:0:1:17 1/1:36:9:2:7:10:90%:42:5.9538E-5:24:1:0:1:11 0/1:39:7:3:4:8:87.5%:31:6.993E-4:38:1:0:1:9 1/1:35:16:4:12:17:94.12%:81:7.7134E-9:37:1:0:1:19 1/1:37:21:4:17:22:95.45%:99:1.0931E-11:31:1:0:1:22 1/1:36:17:3:14:18:94.44%:86:2.0936E-9:37:1:0:1:19 1/1:39:30:8:22:31:96.77%:99:6.8754E-17:26:1:0:1:33 0/1:36:16:2:14:19:84.21%:73:4.357E-8:33:3:1:2:20 1/1:36:20:3:17:22:90.91%:98:1.3117E-10:37:2:0:2:23 1/1:33:16:2:14:17:94.12%:81:7.7134E-9:34:1:0:1:19 1/1:35:18:4:14:19:94.74%:92:5.6585E-10:38:1:0:1:22 0/1:35:15:3:12:17:88.24%:71:7.3277E-8:34:2:0:2:17 0/1:36:11:2:9:13:84.62%:49:1.0096E-5:37:2:0:2:16 0/1:35:17:4:13:21:80.95%:78:1.2848E-8:32:3:0:3:22 0/1:35:24:5:19:28:85.71%:99:4.7015E-12:34:4:0:4:28 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:17:4:13:18:94.44%:86:2.0936E-9:30:1:0:1:18 0/1:34:19:6:13:22:86.36%:89:1.0931E-9:34:3:0:3:22 0/1:37:16:4:12:18:88.89%:76:2.0936E-8:31:2:0:2:18 0/1:35:8:1:7:10:80%:34:3.5723E-4:32:2:0:2:10 1/1:36:19:4:15:21:90.48%:93:4.7003E-10:29:2:0:2:26 0/1:36:12:3:9:14:85.71%:55:2.9913E-6:48:2:1:1:15 1/1:36:9:0:9:10:90%:42:5.9538E-5:34:1:0:1:11 1/1:34:17:7:10:18:94.44%:86:2.0936E-9:30:1:0:1:18 1/1:36:18:6:12:20:90%:87:1.6758E-9:34:2:0:2:21 0/1:35:11:0:11:13:84.62%:49:1.0096E-5:31:2:0:2:16 0/1:36:15:2:13:18:83.33%:68:1.4655E-7:32:3:0:3:19 1/1:36:18:5:13:20:90%:87:1.6758E-9:37:2:0:2:21 0/1:37:19:6:13:23:82.61%:86:2.1316E-9:42:4:2:2:23 1/1:37:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:16:5:11:17:94.12%:81:7.7134E-9:34:1:0:1:18 1/1:37:11:2:9:12:91.67%:53:4.8074E-6:60:1:0:1:13 1/1:32:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:18:7:11:20:90%:87:1.6758E-9:35:2:0:2:21 0/1:36:32:12:20:37:86.49%:99:4.8717E-16:34:5:0:5:37 0/1:35:14:4:10:16:87.5%:65:2.5454E-7:32:2:0:2:17 1/1:36:25:4:21:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:9:2:7:10:90%:42:5.9538E-5:37:1:0:1:10 0/1:35:6:3:3:7:85.71%:26:2.331E-3:37:1:0:1:8 1/1:35:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 0/1:37:16:4:12:18:88.89%:76:2.0936E-8:37:2:0:2:19 0/1:36:9:1:8:11:81.82%:39:1.1057E-4:32:2:0:2:11 1/1:37:16:4:12:17:94.12%:81:7.7134E-9:38:1:0:1:19 1/1:35:16:7:9:17:94.12%:81:7.7134E-9:26:1:0:1:18 0/1:36:11:4:7:13:84.62%:49:1.0096E-5:32:2:0:2:14 0/1:35:18:4:14:21:85.71%:84:3.7603E-9:38:3:0:3:23 0/1:35:17:4:13:19:89.47%:82:5.9414E-9:35:2:0:2:19 1/1:38:20:6:14:22:90.91%:98:1.3117E-10:37:2:0:2:22 1/1:37:15:2:13:16:93.75%:75:2.8282E-8:38:1:1:0:18 1/1:34:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 0/1:34:6:3:3:7:85.71%:26:2.331E-3:37:1:0:1:7 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 0/1:39:8:0:8:10:80%:34:3.5723E-4:36:2:2:0:10 0/1:36:21:8:13:25:84%:97:1.8789E-10:34:4:0:4:25 0/1:36:15:4:11:17:88.24%:71:7.3277E-8:48:2:0:2:17 1/1:34:23:2:21:24:95.83%:99:7.7525E-13:34:1:0:1:25 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 0/1:35:21:4:17:24:87.5%:99:9.0704E-11:35:3:1:2:28 0/1:36:14:4:10:18:77.78%:60:8.0605E-7:37:4:0:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:13:2:11:15:86.67%:60:8.7675E-7:33:2:0:2:18 1/1:35:9:0:9:10:90%:42:5.9538E-5:34:1:0:1:11 0/1:36:19:3:16:22:86.36%:89:1.0931E-9:37:3:0:3:22 1/1:34:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:13:3:10:14:92.86%:64:3.7391E-7:38:1:1:0:15 0/1:35:14:2:12:16:87.5%:65:2.5454E-7:34:2:0:2:16 0/1:33:8:0:8:10:80%:34:3.5723E-4:32:2:0:2:10 0/1:36:14:3:11:17:82.35%:63:4.8851E-7:37:3:1:2:17 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:14:3:11:15:93.33%:69:1.0315E-7:32:1:0:1:15 0/1:35:24:5:19:27:88.89%:99:2.0853E-12:33:3:0:3:28 1/1:34:19:3:16:20:95%:98:1.5234E-10:32:1:0:1:21 1/1:35:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:16:4:12:17:94.12%:81:7.7134E-9:38:1:0:1:18 0/1:35:10:2:8:13:76.92%:42:5.3843E-5:35:3:0:3:13 0/1:35:15:0:15:19:78.95%:66:2.5053E-7:32:4:0:4:20 1/1:35:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:11:2:9:12:91.67%:53:4.8074E-6:30:1:0:1:13 0/1:35:15:2:13:19:78.95%:66:2.5053E-7:35:4:0:4:19 0/1:36:15:4:11:26:57.69%:57:1.7241E-6:37:11:3:8:27 1/1:35:30:7:23:33:90.91%:99:9.89E-16:34:3:0:3:34 0/1:37:14:5:9:16:87.5%:65:2.5454E-7:35:2:0:2:16 0/1:35:12:0:12:14:85.71%:55:2.9913E-6:30:2:0:2:14 0/1:35:10:1:9:12:83.33%:44:3.3652E-5:35:2:0:2:12 0/1:34:14:3:11:16:87.5%:65:2.5454E-7:31:2:0:2:18 0/1:33:13:0:13:16:81.25%:57:1.6121E-6:34:3:0:3:16 1/1:35:11:0:11:12:91.67%:53:4.8074E-6:38:1:0:1:13 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:19:3:16:20:95%:98:1.5234E-10:37:1:0:1:23 0/1:35:16:2:14:19:84.21%:73:4.357E-8:31:3:0:3:20 0/1:36:10:0:10:13:76.92%:42:5.3843E-5:34:3:0:3:14 0/1:32:11:2:9:15:73.33%:46:2.4988E-5:36:4:0:4:16 0/1:34:7:1:6:9:77.78%:29:1.1312E-3:33:2:0:2:9 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:21:5:16:22:95.45%:99:1.0931E-11:30:1:0:1:27 1/1:35:30:8:22:33:90.91%:99:9.89E-16:35:3:0:3:35 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:18:5:13:20:90%:87:1.6758E-9:37:2:0:2:22 1/1:35:24:7:17:25:96%:99:2.0568E-13:32:1:0:1:27 1/1:36:16:4:12:17:94.12%:81:7.7134E-9:26:1:0:1:17 1/1:36:17:2:15:18:94.44%:86:2.0936E-9:26:1:0:1:19 1/1:36:23:5:18:25:92%:99:2.7767E-12:37:2:0:2:25 1/1:36:21:3:18:22:95.45%:99:1.0931E-11:32:1:0:1:23 0/1:35:13:1:12:17:76.47%:55:2.5647E-6:35:4:2:2:19 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:35:23:2:21:26:88.46%:99:7.3681E-12:35:3:0:3:26 0/1:37:16:4:12:18:88.89%:76:2.0936E-8:26:2:0:2:20 1/1:35:19:4:15:20:95%:98:1.5234E-10:37:1:0:1:20 1/1:35:9:1:8:10:90%:42:5.9538E-5:38:1:0:1:11 MTB_anc 3336679 . TA T . PASS AC=7;AF=0.024;AN=290;ANN=T|intergenic_region|MODIFIER|Rv2980_Rv2980-ddlA_Rv2981c|gene3044-gene3045|intergenic_region|gene3044-gene3045|||n.3336680delA||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:4:1:3:27:14.81%:23:5.5494E-2:38:23:6:17:27 0/0:38:1:0:1:7:14.29%:8:5E-1:38:6:1:5:7 0/0:38:2:0:2:34:5.88%:44:2.4615E-1:39:31:9:22:34 0/0:39:2:2:0:8:25%:5:2.3333E-1:38:6:0:6:8 0/0:37:1:0:1:16:6.25%:21:5E-1:39:15:0:15:16 0/0:37:1:0:1:12:8.33%:14:5E-1:42:11:1:10:14 0/0:39:1:1:0:17:5.88%:24:5E-1:39:16:5:11:17 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:10 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 0/0:37:1:0:1:15:6.67%:21:5E-1:37:14:2:12:15 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:7 0/0:0:0:0:0:21:0%:40:1E0:37:21:3:18:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:38:3:2:1:20:15%:16:1.1538E-1:38:17:3:14:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 0/0:39:1:1:0:8:12.5%:8:5E-1:39:7:1:6:9 0/0:0:0:0:0:7:0%:14:1E0:37:7:1:6:7 0/0:37:3:0:3:12:25%:6:1.087E-1:40:9:0:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:22:0%:40:1E0:38:22:3:19:22 0/0:0:0:0:0:9:0%:18:1E0:41:9:0:9:9 0/0:38:1:1:0:19:5.26%:28:5E-1:40:18:1:17:19 0/0:37:1:0:1:21:4.76%:31:5E-1:39:20:4:16:22 0/0:39:1:0:1:12:8.33%:14:5E-1:39:11:1:10:12 0/0:37:1:0:1:7:14.29%:8:5E-1:38:6:0:6:7 0/0:35:2:1:1:17:11.76%:18:2.4242E-1:36:15:3:12:17 0/0:0:0:0:0:13:0%:25:1E0:40:13:4:9:13 0/1:38:11:1:10:21:52.38%:40:8.2399E-5:37:10:3:7:21 0/0:37:1:0:1:19:5.26%:28:5E-1:38:18:4:14:19 0/0:37:2:1:1:17:11.76%:18:2.4242E-1:39:15:2:13:18 0/0:37:1:1:0:12:8.33%:14:5E-1:40:11:1:10:12 0/0:37:1:0:1:10:10%:11:5E-1:41:9:4:5:10 0/0:36:3:2:1:20:15%:16:1.1538E-1:40:17:2:15:20 0/0:39:1:0:1:18:5.56%:24:5E-1:42:17:3:14:19 0/0:37:2:0:2:22:9.09%:24:2.4419E-1:37:20:5:15:22 0/0:37:1:0:1:28:3.57%:41:5E-1:40:27:6:21:28 0/0:56:2:0:2:18:11.11%:18:2.4286E-1:42:16:1:15:21 0/0:38:1:1:0:20:5%:27:5E-1:39:19:2:17:21 0/0:36:2:0:2:21:9.52%:25:2.439E-1:36:19:3:16:22 0/0:38:4:1:3:21:19.05%:15:5.3471E-2:37:17:3:14:22 0/0:0:0:0:0:14:0%:25:1E0:38:14:1:13:14 0/0:0:0:0:0:17:0%:33:1E0:41:17:3:14:17 0/0:39:1:0:1:21:4.76%:31:5E-1:38:20:3:17:21 0/0:0:0:0:0:25:0%:48:1E0:39:25:3:22:26 0/0:37:1:0:1:11:9.09%:14:5E-1:36:10:2:8:11 0/0:39:1:0:1:16:6.25%:21:5E-1:36:15:2:13:19 0/0:29:3:0:3:19:15%:16:1.1538E-1:38:17:1:16:21 0/0:39:2:0:2:14:14.29%:12:2.4074E-1:39:12:2:10:14 0/0:37:3:1:2:10:30%:4:1.0526E-1:37:7:2:5:10 0/0:0:0:0:0:26:0%:47:1E0:37:26:5:21:27 0/0:0:0:0:0:14:0%:25:1E0:37:14:4:10:14 0/0:37:1:0:1:12:8.33%:14:5E-1:40:11:1:10:13 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:38:3:2:1:21:14.29%:19:1.1585E-1:37:18:4:14:21 0/0:38:1:0:1:16:6.25%:21:5E-1:37:15:0:15:16 0/0:38:3:1:2:20:15%:16:1.1538E-1:36:17:1:16:20 0/0:38:2:1:1:20:10%:21:2.4359E-1:37:18:3:15:20 0/0:37:3:2:1:26:11.54%:25:1.1765E-1:40:23:8:15:26 0/0:38:3:1:2:18:16.67%:14:1.1429E-1:38:15:3:12:19 0/0:39:1:1:0:20:5%:27:5E-1:39:19:5:14:21 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:12 0/0:0:0:0:0:12:0%:21:1E0:41:12:2:10:12 0/0:37:5:0:5:22:22.73%:12:2.4248E-2:38:17:7:10:22 0/0:37:6:3:3:38:15.79%:28:1.2628E-2:39:32:8:24:38 0/0:37:4:1:3:15:26.67%:8:4.9808E-2:40:11:1:10:16 0/0:37:4:1:3:25:16%:21:5.4928E-2:41:21:4:17:25 0/0:0:0:0:0:10:0%:17:1E0:41:10:2:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:3:1:2:19:15.79%:17:1.1486E-1:38:16:3:13:19 0/0:26:2:0:2:8:22.22%:7:2.3529E-1:36:7:2:5:9 0/0:39:1:0:1:9:11.11%:11:5E-1:38:8:2:6:9 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 0/1:37:9:2:7:18:50%:32:5.1645E-4:36:9:0:9:18 0/0:0:0:0:0:11:0%:22:1E0:40:11:0:11:12 0/0:0:0:0:0:19:0%:37:1E0:38:19:4:15:19 0/0:37:3:2:1:17:17.65%:14:1.1364E-1:38:14:3:11:17 0/0:38:2:0:2:17:11.76%:18:2.4242E-1:38:15:4:11:18 0/0:38:3:1:2:22:13.64%:19:1.1628E-1:38:19:3:16:23 0/0:36:1:0:1:18:5.56%:24:5E-1:40:17:3:14:18 0/0:37:3:0:3:23:13.04%:22:1.1667E-1:39:20:6:14:23 0/0:37:4:0:4:16:25%:8:5.0612E-2:40:12:3:9:16 0/0:0:0:0:0:16:0%:29:1E0:40:16:3:13:16 0/0:38:1:1:0:12:8.33%:14:5E-1:36:11:3:8:12 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:17 0/0:37:4:0:4:19:21.05%:13:5.251E-2:37:15:1:14:19 0/0:39:1:1:0:14:7.14%:17:5E-1:37:13:1:12:15 0/0:38:2:0:2:15:13.33%:16:2.4138E-1:37:13:4:9:15 0/0:38:1:1:0:11:9.09%:14:5E-1:39:10:2:8:11 0/0:36:3:2:1:25:12%:22:1.1702E-1:40:21:5:16:25 0/0:0:0:0:0:16:0%:29:1E0:39:16:4:12:17 0/0:29:3:0:3:20:14.29%:19:1.1585E-1:37:18:2:16:21 0/0:36:4:1:3:19:21.05%:13:5.251E-2:38:15:2:13:19 0/0:37:5:0:5:32:15.62%:24:2.6412E-2:39:27:6:21:32 0/0:0:0:0:0:20:0%:36:1E0:38:20:2:18:20 0/0:38:1:0:1:7:14.29%:8:5E-1:36:6:0:6:8 0/1:42:7:1:6:19:36.84%:23:3.9926E-3:38:12:1:11:20 0/0:37:1:0:1:15:6.67%:21:5E-1:40:14:0:14:15 0/0:38:4:1:3:23:17.39%:18:5.4264E-2:39:19:0:19:24 0/0:38:4:1:3:13:30.77%:6:4.7826E-2:43:9:1:8:13 0/0:39:1:0:1:20:5%:27:5E-1:38:19:4:15:20 0/0:38:1:0:1:15:6.67%:21:5E-1:39:14:2:12:15 0/0:0:0:0:0:16:0%:29:1E0:38:16:1:15:17 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:37:10:0:10:12 0/0:39:3:0:3:15:20%:11:1.1207E-1:39:12:2:10:16 0/1:32:7:2:5:17:38.89%:24:3.8123E-3:42:11:4:7:19 0/0:39:1:0:1:15:6.67%:21:5E-1:39:14:2:12:15 0/0:0:0:0:0:15:0%:29:1E0:38:15:3:12:15 0/0:0:0:0:0:23:0%:44:1E0:37:23:4:19:24 0/0:0:0:0:0:24:0%:44:1E0:38:24:3:21:24 0/0:0:0:0:0:17:0%:33:1E0:37:17:1:16:17 0/0:0:0:0:0:7:0%:14:1E0:37:7:0:7:7 0/0:0:0:0:0:17:0%:33:1E0:36:17:2:15:17 0/0:0:0:0:0:9:0%:18:1E0:40:9:1:8:10 0/0:39:1:0:1:19:5.26%:28:5E-1:38:18:0:18:20 0/0:0:0:0:0:19:0%:37:1E0:38:19:1:18:19 0/0:38:2:0:2:13:15.38%:13:2.4E-1:37:11:1:10:14 0/0:0:0:0:0:15:0%:29:1E0:37:15:0:15:17 0/0:39:3:1:2:25:12%:25:1.1735E-1:40:22:6:16:25 0/0:33:1:0:1:33:3.03%:52:5E-1:37:32:7:25:33 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:15 0/0:0:0:0:0:13:0%:25:1E0:38:13:0:13:15 0/0:0:0:0:0:12:0%:21:1E0:39:12:0:12:13 0/0:35:4:0:4:16:25%:8:5.0612E-2:37:12:2:10:18 0/0:37:1:0:1:12:8.33%:14:5E-1:37:11:0:11:12 0/0:39:1:0:1:14:7.14%:17:5E-1:38:13:0:13:14 0/0:37:2:0:2:13:15.38%:13:2.4E-1:36:11:0:11:15 0/0:0:0:0:0:23:0%:44:1E0:39:23:2:21:24 0/0:37:1:0:1:23:4.35%:34:5E-1:36:22:1:21:25 0/0:0:0:0:0:14:0%:25:1E0:37:14:0:14:16 0/0:35:2:0:2:17:11.76%:18:2.4242E-1:39:15:0:15:19 0/0:0:0:0:0:14:0%:25:1E0:37:14:2:12:14 0/0:34:1:0:1:8:12.5%:8:5E-1:40:7:0:7:8 0/0:0:0:0:0:9:0%:18:1E0:39:9:0:9:10 0/0:37:4:2:2:25:16%:21:5.4928E-2:40:21:2:19:26 0/0:37:4:1:3:28:14.29%:23:5.5746E-2:37:24:4:20:28 0/1:37:6:1:5:13:46.15%:21:7.4534E-3:36:7:0:7:13 0/0:36:3:1:2:21:14.29%:19:1.1585E-1:37:18:3:15:21 0/0:37:2:0:2:24:8.33%:27:2.4468E-1:37:22:4:18:24 0/0:37:1:0:1:17:5.88%:24:5E-1:40:16:5:11:17 0/0:37:1:0:1:22:4.55%:31:5E-1:37:21:1:20:22 0/0:35:2:0:2:24:8.33%:27:2.4468E-1:38:22:5:17:24 0/1:36:8:1:7:26:30.77%:26:2.076E-3:38:18:3:15:26 0/0:37:3:0:3:18:16.67%:14:1.1429E-1:40:15:2:13:18 0/0:0:0:0:0:7:0%:14:1E0:43:7:1:6:7 0/1:37:8:1:7:27:29.63%:26:2.1337E-3:40:19:2:17:28 0/0:36:4:1:3:19:21.05%:13:5.251E-2:39:15:3:12:20 0/0:38:2:0:2:21:9.52%:25:2.439E-1:37:19:3:16:21 0/0:0:0:0:0:10:0%:17:1E0:39:10:0:10:12 MTB_anc 3336738 . TA T . PASS AC=131;AF=0.468;AN=280;ANN=T|intergenic_region|MODIFIER|Rv2980_Rv2980-ddlA_Rv2981c|gene3044-gene3045|intergenic_region|gene3044-gene3045|||n.3336739delA||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:34:14:5:9:25:51.85%:52:6.1806E-6:37:13:1:12:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:36:20:6:14:34:57.14%:76:2.0063E-8:37:15:1:14:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:39:7:1:6:13:53.85%:25:2.6087E-3:38:6:0:6:13 0/1:39:10:2:8:18:55.56%:37:1.7215E-4:37:8:2:6:18 0/1:35:10:3:7:13:71.43%:41:7.6278E-5:37:4:1:3:14 0/1:37:9:3:6:11:81.82%:39:1.1057E-4:38:2:1:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:8:2:6:15:53.33%:29:1.0995E-3:37:7:0:7:16 0/1:39:8:1:7:11:72.73%:32:5.16E-4:34:3:1:2:11 0/1:37:14:3:11:21:66.67%:56:2.1998E-6:36:7:0:7:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:6:1:5:16:37.5%:20:8.837E-3:37:10:3:7:17 0/1:36:8:2:6:10:72.73%:32:5.16E-4:38:3:0:3:12 0/1:37:6:0:6:10:60%:22:5.418E-3:38:4:1:3:10 0/1:37:6:2:4:10:60%:22:5.418E-3:36:4:0:4:10 0/1:32:6:1:5:7:75%:24:3.4965E-3:35:2:1:1:8 0/1:37:7:1:6:13:53.85%:25:2.6087E-3:38:6:0:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:7:0:7:10:70%:28:1.548E-3:37:3:0:3:11 0/1:35:9:3:6:16:52.94%:33:4.6348E-4:38:8:1:7:17 0/0:36:5:1:4:12:41.67%:3:1.8634E-2:37:7:0:7:12 0/1:37:8:1:7:17:47.06%:28:1.3389E-3:37:9:1:8:18 0/1:34:13:3:10:22:56.52%:49:1.1242E-5:36:10:2:8:23 0/1:35:13:3:10:17:72.22%:54:3.7078E-6:38:5:0:5:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:14:0:14:22:63.64%:55:2.7817E-6:35:8:2:6:22 0/1:37:10:0:10:13:76.92%:42:5.3843E-5:36:3:0:3:13 0/0:38:2:0:2:26:7.69%:30:2.451E-1:40:24:3:21:26 0/1:40:14:2:12:23:60.87%:54:3.4067E-6:36:9:2:7:23 0/1:35:10:1:9:19:52.63%:37:1.9541E-4:37:9:4:5:19 0/1:36:9:2:7:14:64.29%:35:2.8986E-4:37:5:1:4:14 0/1:33:8:3:5:10:72.73%:32:5.16E-4:38:3:0:3:11 0/1:35:15:2:13:17:78.95%:66:2.5053E-7:38:4:1:3:19 0/1:38:16:4:12:24:66.67%:64:3.2617E-7:38:8:1:7:24 0/1:35:14:4:10:22:60.87%:54:3.4067E-6:38:9:2:7:23 0/1:37:18:5:13:27:66.67%:73:4.8354E-8:37:9:0:9:28 0/1:35:13:1:12:20:61.9%:50:7.9741E-6:41:8:0:8:23 0/1:40:16:3:13:25:64%:63:4.1493E-7:38:9:1:8:26 0/1:36:15:3:12:24:62.5%:59:1.196E-6:37:9:2:7:24 0/1:36:13:2:11:18:68.42%:53:5.0106E-6:38:6:1:5:19 0/0:38:5:0:5:12:41.67%:3:1.8634E-2:38:7:0:7:12 0/1:40:13:4:9:21:61.9%:50:7.9741E-6:37:8:1:7:21 0/1:38:9:1:8:18:50%:32:5.1645E-4:37:9:0:9:19 0/1:35:17:2:15:24:68%:69:1.0983E-7:36:8:2:6:26 0/1:37:10:2:8:11:83.33%:44:3.3652E-5:39:2:0:2:12 0/1:41:14:2:12:22:60.87%:54:3.4067E-6:38:9:1:8:24 0/1:39:10:1:9:25:40%:34:3.1821E-4:38:15:0:15:25 0/1:37:12:7:5:19:63.16%:47:1.8611E-5:37:7:0:7:19 0/1:39:10:3:7:15:66.67%:40:9.995E-5:35:5:1:4:17 0/1:33:16:6:10:24:61.54%:62:5.1256E-7:37:10:2:8:27 0/1:37:7:2:5:13:53.85%:25:2.6087E-3:38:6:1:5:13 0/1:38:7:1:6:14:50%:25:2.8986E-3:42:7:0:7:16 0/1:37:12:3:9:16:70.59%:49:1.1285E-5:37:5:2:3:17 0/1:34:12:1:11:21:54.55%:45:3.066E-5:38:10:3:7:23 0/1:36:11:3:8:19:55%:41:7.2653E-5:37:9:0:9:20 0/1:37:14:2:12:23:60.87%:54:3.4067E-6:37:9:0:9:23 0/1:35:15:5:10:21:68.18%:61:7.4178E-7:37:7:0:7:22 0/1:37:17:6:11:27:62.96%:67:1.7891E-7:38:10:2:8:28 0/1:38:10:2:8:19:50%:36:2.1796E-4:37:10:2:8:21 0/1:36:18:3:15:24:75%:77:1.8413E-8:38:6:2:4:24 0/1:35:14:6:8:20:70%:57:1.6702E-6:38:6:1:5:20 0/1:37:11:2:9:14:73.33%:46:2.4988E-5:37:4:0:4:15 0/1:35:12:4:8:20:57.14%:45:2.658E-5:37:9:1:8:21 0/1:36:19:4:15:31:59.38%:73:3.9837E-8:37:13:4:9:32 0/1:39:10:1:9:17:58.82%:38:1.4831E-4:38:7:1:6:17 0/1:37:20:5:15:29:68.97%:82:5.4216E-9:37:9:1:8:31 0/1:40:8:1:7:12:66.67%:31:6.7304E-4:36:4:1:3:12 0/1:38:10:2:8:13:76.92%:42:5.3843E-5:38:3:1:2:13 0/1:37:15:2:13:20:75%:64:3.8543E-7:37:5:2:3:20 0/1:41:9:1:8:14:64.29%:35:2.8986E-4:38:5:1:4:14 0/1:41:12:1:11:15:80%:52:5.2605E-6:37:3:1:2:17 0/1:40:9:2:7:12:75%:37:1.6826E-4:36:3:2:1:12 0/0:38:2:0:2:25:8%:31:2.449E-1:39:23:4:19:26 0/1:41:8:2:6:14:57.14%:30:9.6618E-4:37:6:1:5:15 0/1:37:15:5:10:22:65.22%:60:9.5813E-7:38:8:0:8:23 0/1:40:7:0:7:14:50%:25:2.8986E-3:38:7:2:5:14 0/1:35:10:1:9:18:55.56%:37:1.7215E-4:38:8:1:7:18 0/1:37:8:0:8:18:44.44%:28:1.4461E-3:37:10:2:8:18 0/1:37:8:0:8:14:57.14%:30:9.6618E-4:37:6:0:6:14 0/1:40:8:3:5:18:44.44%:28:1.4461E-3:38:10:3:7:18 0/1:37:12:4:8:21:57.14%:45:2.658E-5:38:9:0:9:21 0/1:36:12:1:11:18:66.67%:48:1.4831E-5:37:6:1:5:18 0/1:37:10:1:9:15:66.67%:40:9.995E-5:36:5:3:2:15 0/1:36:14:2:12:20:66.67%:56:2.1998E-6:38:7:1:6:21 0/1:40:10:1:9:21:47.62%:36:2.3971E-4:37:11:1:10:21 0/1:35:9:1:8:14:64.29%:35:2.8986E-4:42:5:1:4:14 0/1:40:9:1:8:16:56.25%:33:4.0786E-4:37:7:3:4:16 0/1:38:8:0:8:11:72.73%:32:5.16E-4:38:3:2:1:12 0/1:37:12:2:10:21:60%:46:2.2548E-5:37:8:2:6:21 0/1:35:11:4:7:17:61.11%:42:5.2969E-5:38:7:3:4:18 0/1:40:9:2:7:19:47.37%:32:5.667E-4:38:10:1:9:20 0/1:32:11:2:9:18:55%:41:7.2653E-5:37:9:1:8:20 0/1:38:17:6:11:33:51.52%:63:4.6376E-7:38:16:1:15:33 0/1:37:9:0:9:15:60%:34:3.4983E-4:38:6:0:6:15 0/1:44:6:2:4:10:60%:22:5.418E-3:38:4:0:4:10 0/0:42:5:0:5:16:31.25%:6:2.1691E-2:39:11:2:9:17 0/1:41:10:1:9:15:66.67%:40:9.995E-5:37:5:0:5:15 0/1:37:14:1:13:28:50%:51:6.911E-6:38:14:0:14:29 0/1:36:11:0:11:19:57.89%:42:6.2811E-5:38:8:2:6:19 0/1:36:13:1:12:19:68.42%:53:5.0106E-6:37:6:1:5:19 0/1:40:7:2:5:14:50%:25:2.8986E-3:37:7:0:7:14 0/0:37:1:1:0:17:5.88%:24:5E-1:38:16:0:16:18 0/1:38:9:0:9:15:60%:34:3.4983E-4:36:6:0:6:15 0/1:38:12:1:11:21:57.14%:45:2.658E-5:37:9:0:9:21 0/1:40:8:1:7:13:61.54%:30:8.238E-4:42:5:1:4:14 0/1:39:11:5:6:19:57.89%:42:6.2811E-5:38:8:1:7:19 0/1:38:8:2:6:18:44.44%:28:1.4461E-3:38:10:1:9:18 0/1:35:11:2:9:23:45.83%:39:1.1047E-4:38:13:2:11:25 0/1:34:11:4:7:24:44%:39:1.1933E-4:38:14:1:13:25 0/1:35:7:1:6:19:36.84%:23:3.9926E-3:37:12:0:12:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:11:4:7:22:47.83%:39:1.0135E-4:38:12:2:10:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:11:0:11:25:44%:39:1.1933E-4:37:14:2:12:26 0/1:39:14:3:11:22:63.64%:55:2.7817E-6:38:8:0:8:22 0/1:43:8:1:7:15:53.33%:29:1.0995E-3:37:7:0:7:15 0/1:35:11:0:11:16:64.71%:43:4.3258E-5:37:6:1:5:17 0/1:38:24:4:20:33:72.73%:99:6.1763E-11:37:9:3:6:34 0/1:38:16:2:14:32:50%:59:1.2304E-6:38:16:2:14:32 0/1:36:6:3:3:18:33.33%:20:9.5308E-3:36:12:3:9:19 0/0:37:5:0:5:13:38.46%:4:1.9565E-2:38:8:0:8:13 0/1:38:7:1:6:14:46.67%:25:3.1609E-3:33:8:3:5:15 0/1:37:6:0:6:16:37.5%:20:8.837E-3:37:10:0:10:17 0/1:35:9:3:6:11:75%:37:1.6826E-4:38:3:0:3:12 0/1:37:6:1:5:15:40%:20:8.4291E-3:37:9:0:9:15 0/1:37:9:0:9:14:64.29%:35:2.8986E-4:37:5:0:5:14 0/0:35:5:0:5:24:20.83%:14:2.4823E-2:37:19:1:18:24 0/1:37:11:0:11:24:45.83%:39:1.1047E-4:37:13:1:12:25 0/1:32:12:2:10:18:60%:46:2.2548E-5:37:8:0:8:20 0/1:40:8:1:7:18:44.44%:28:1.4461E-3:38:10:0:10:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:5:0:5:11:45.45%:3:1.7544E-2:37:6:0:6:11 0/1:37:14:2:12:25:56%:53:4.0663E-6:37:10:2:8:25 0/1:39:17:1:16:36:47.22%:61:6.3405E-7:37:19:3:16:36 0/1:44:10:1:9:16:62.5%:39:1.2413E-4:38:6:0:6:16 0/1:39:11:0:11:20:55%:41:7.2653E-5:38:9:0:9:20 0/1:37:13:2:11:21:61.9%:50:7.9741E-6:37:8:1:7:21 0/1:40:15:5:10:19:78.95%:66:2.5053E-7:38:4:0:4:19 0/1:37:15:1:14:27:55.56%:56:2.0087E-6:37:12:1:11:28 0/1:38:13:5:8:23:56.52%:49:1.1242E-5:38:10:0:10:23 0/1:37:20:4:16:36:55.56%:76:2.3419E-8:37:16:2:14:36 0/1:34:13:3:10:22:56.52%:49:1.1242E-5:36:10:2:8:23 0/1:35:7:2:5:12:58.33%:26:2.2883E-3:37:5:1:4:12 0/1:38:12:2:10:31:38.71%:41:6.5329E-5:38:19:1:18:31 0/1:34:10:4:6:19:50%:36:2.1796E-4:37:10:1:9:21 0/1:34:13:1:12:22:54.17%:48:1.2938E-5:37:11:1:10:25 0/1:37:8:2:6:13:61.54%:30:8.238E-4:37:5:0:5:14 MTB_anc 3336762 . CTAGCGCCGGGCGCGGCGG C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|intergenic_region|MODIFIER|Rv2980_Rv2980-ddlA_Rv2981c|gene3044-gene3045|intergenic_region|gene3044-gene3045|||n.3336763_3336780delTAGCGCCGGGCGCGGCGG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:22:0%:40:1E0:36:22:5:17:22 0/0:0:0:0:0:8:0%:14:1E0:44:8:1:7:8 0/0:0:0:0:0:34:0%:62:1E0:37:34:8:26:34 0/0:0:0:0:0:8:0%:14:1E0:49:8:3:5:9 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:12 0/0:0:0:0:0:19:0%:37:1E0:36:19:5:14:19 0/0:0:0:0:0:16:0%:29:1E0:41:16:4:12:16 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:9:0%:18:1E0:38:9:3:6:9 0/0:0:0:0:0:12:0%:21:1E0:36:12:1:11:12 0/0:0:0:0:0:13:0%:25:1E0:40:13:1:12:13 0/0:0:0:0:0:21:0%:40:1E0:36:21:4:17:21 0/0:0:0:0:0:7:0%:14:1E0:42:7:2:5:7 0/0:0:0:0:0:14:0%:25:1E0:38:14:5:9:14 0/0:0:0:0:0:13:0%:25:1E0:40:13:2:11:13 0/0:0:0:0:0:11:0%:22:1E0:37:11:2:9:11 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:14 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:17 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 0/0:0:0:0:0:12:0%:21:1E0:37:12:2:10:13 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:18 0/0:0:0:0:0:11:0%:22:1E0:40:11:1:10:11 0/0:0:0:0:0:20:0%:36:1E0:37:20:4:16:20 0/0:0:0:0:0:21:0%:40:1E0:40:21:6:15:21 0/0:0:0:0:0:23:0%:44:1E0:35:23:5:18:23 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:9 0/0:0:0:0:0:23:0%:44:1E0:36:23:3:20:23 0/0:0:0:0:0:13:0%:25:1E0:38:13:0:13:13 0/1:35:22:2:20:28:73.33%:93:4.1351E-10:37:8:1:7:30 0/0:0:0:0:0:24:0%:44:1E0:37:24:4:20:24 0/0:0:0:0:0:20:0%:36:1E0:38:20:7:13:21 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:10 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:9 0/0:38:1:0:1:25:4%:38:5E-1:38:24:5:19:26 0/0:0:0:0:0:26:0%:47:1E0:38:26:6:20:26 0/0:0:0:0:0:22:0%:40:1E0:38:22:6:16:22 0/0:0:0:0:0:29:0%:55:1E0:36:29:4:25:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:1:21:22 0/0:0:0:0:0:29:0%:55:1E0:40:29:8:21:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:30 0/0:0:0:0:0:19:0%:37:1E0:40:19:2:17:19 0/0:0:0:0:0:14:0%:25:1E0:38:14:1:13:14 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:4:16:20 0/0:0:0:0:0:25:0%:44:1E0:37:24:3:21:25 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:15 0/0:0:0:0:0:24:0%:44:1E0:39:24:5:19:24 0/0:0:0:0:0:23:0%:44:1E0:37:23:1:22:24 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:16 0/0:0:0:0:0:17:0%:33:1E0:39:17:5:12:17 0/0:0:0:0:0:27:0%:52:1E0:35:27:11:16:27 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:16 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:13 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:17 0/0:0:0:0:0:22:0%:40:1E0:38:22:4:18:23 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:21 0/0:0:0:0:0:22:0%:40:1E0:39:22:3:19:22 0/0:0:0:0:0:25:0%:48:1E0:38:25:6:19:25 0/0:37:1:0:1:28:3.57%:41:5E-1:39:27:9:18:29 0/0:0:0:0:0:21:0%:40:1E0:39:21:5:16:22 0/0:0:0:0:0:23:0%:44:1E0:38:23:4:19:23 0/0:0:0:0:0:20:0%:36:1E0:36:20:7:13:20 0/0:0:0:0:0:15:0%:29:1E0:42:15:2:13:16 0/0:0:0:0:0:23:0%:44:1E0:38:23:5:18:23 0/0:0:0:0:0:35:0%:67:1E0:37:35:10:25:35 0/0:0:0:0:0:21:0%:40:1E0:41:21:4:17:21 0/0:0:0:0:0:27:0%:52:1E0:38:27:6:21:28 0/0:0:0:0:0:13:0%:25:1E0:39:13:1:12:13 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:14 0/0:0:0:0:0:21:0%:40:1E0:38:21:4:17:21 0/0:0:0:0:0:11:0%:22:1E0:38:11:2:9:11 0/0:0:0:0:0:16:0%:29:1E0:38:16:3:13:16 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:12 0/1:38:19:3:16:26:73.08%:80:8.6144E-9:37:7:0:7:26 0/0:0:0:0:0:14:0%:25:1E0:44:14:6:8:15 0/0:37:1:0:1:22:4.55%:31:5E-1:38:21:5:16:22 0/0:37:1:0:1:16:6.25%:21:5E-1:39:15:3:12:16 0/0:0:0:0:0:22:0%:40:1E0:38:22:4:18:22 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:24 0/0:0:0:0:0:16:0%:29:1E0:39:16:2:14:16 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:20 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:16 0/0:0:0:0:0:16:0%:29:1E0:44:16:4:12:16 0/0:0:0:0:0:20:0%:36:1E0:38:20:2:18:20 0/0:0:0:0:0:21:0%:40:1E0:39:21:5:16:23 0/0:0:0:0:0:18:0%:32:1E0:38:18:4:14:18 0/0:0:0:0:0:17:0%:33:1E0:39:17:5:12:17 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:12 0/0:0:0:0:0:21:0%:40:1E0:36:21:4:17:21 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:21 0/0:0:0:0:0:18:0%:32:1E0:39:18:3:15:19 0/0:0:0:0:0:20:0%:37:1E0:36:19:4:15:20 0/0:0:0:0:0:29:0%:55:1E0:37:29:7:22:29 0/0:0:0:0:0:13:0%:25:1E0:37:13:0:13:13 0/0:0:0:0:0:11:0%:22:1E0:39:11:2:9:11 0/0:0:0:0:0:17:0%:33:1E0:37:17:4:13:18 0/0:0:0:0:0:17:0%:33:1E0:42:17:3:14:17 0/0:0:0:0:0:26:0%:48:1E0:37:25:2:23:26 0/0:0:0:0:0:18:0%:32:1E0:37:18:2:16:18 0/0:0:0:0:0:21:0%:40:1E0:40:21:3:18:21 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:15 0/0:0:0:0:0:17:0%:33:1E0:38:17:3:14:17 0/0:0:0:0:0:13:0%:25:1E0:39:13:0:13:13 0/0:0:0:0:0:18:0%:32:1E0:39:18:4:14:19 0/0:0:0:0:0:16:0%:29:1E0:39:16:3:13:16 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:20 0/0:0:0:0:0:17:0%:33:1E0:39:17:2:15:17 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:22 0/0:0:0:0:0:25:0%:48:1E0:38:25:6:19:26 0/0:0:0:0:0:16:0%:29:1E0:36:16:3:13:16 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 0/0:0:0:0:0:24:0%:44:1E0:39:24:7:17:24 0/0:0:0:0:0:8:0%:14:1E0:37:8:1:7:8 0/0:0:0:0:0:25:0%:44:1E0:41:24:3:21:26 0/0:0:0:0:0:24:0%:44:1E0:37:23:5:18:24 0/0:0:0:0:0:12:0%:21:1E0:40:12:2:10:14 0/0:0:0:0:0:17:0%:33:1E0:37:17:1:16:19 0/0:0:0:0:0:32:0%:59:1E0:37:32:3:29:34 0/0:0:0:0:0:31:0%:59:1E0:37:31:2:29:31 0/0:0:0:0:0:13:0%:25:1E0:42:13:3:10:15 0/0:0:0:0:0:11:0%:22:1E0:36:11:0:11:11 0/0:0:0:0:0:15:0%:29:1E0:40:15:6:9:15 0/0:0:0:0:0:8:0%:14:1E0:39:8:0:8:10 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:12 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:15 0/0:0:0:0:0:12:0%:21:1E0:35:12:1:11:12 0/0:0:0:0:0:19:0%:37:1E0:36:19:4:15:20 0/0:0:0:0:0:20:0%:36:1E0:35:20:1:19:20 0/0:0:0:0:0:21:0%:40:1E0:38:21:5:16:22 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:18 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:7 0/0:0:0:0:0:8:0%:14:1E0:39:8:1:7:8 0/0:0:0:0:0:9:0%:18:1E0:36:9:0:9:9 0/0:0:0:0:0:24:0%:44:1E0:37:24:6:18:24 0/0:0:0:0:0:37:0%:70:1E0:36:37:6:31:37 0/0:0:0:0:0:16:0%:29:1E0:40:16:2:14:17 0/0:0:0:0:0:18:0%:32:1E0:39:18:1:17:18 0/0:0:0:0:0:19:0%:37:1E0:39:19:4:15:19 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:0:0:0:0:26:0%:47:1E0:36:26:2:24:26 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:25 0/0:0:0:0:0:34:0%:62:1E0:38:34:7:27:35 0/0:0:0:0:0:21:0%:40:1E0:37:21:4:17:21 0/0:0:0:0:0:11:0%:17:1E0:38:10:4:6:11 0/0:38:1:0:1:32:3.12%:48:5E-1:36:31:4:27:32 0/0:0:0:0:0:18:0%:32:1E0:40:18:4:14:19 0/0:0:0:0:0:25:0%:48:1E0:38:25:3:22:25 0/0:0:0:0:0:14:0%:25:1E0:38:14:3:11:15 MTB_anc 3337519 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|ddlA_Rv2981c|gene3045|transcript|Transcript_gene3045|Coding|1/1|c.399C>T|p.Leu133Leu|399/1122|399/1122|133/373||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3337519G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3337519G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cycloserine|||n.3337519G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:54:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:22:10:12:23:95.65%:99:2.9149E-12:38:1:1:0:23 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:51:22:29:52:98.08%:99:3.3479E-29:38:1:0:1:52 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:52:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:40:16:24:41:97.56%:99:9.8874E-23:60:1:0:1:41 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 3346600 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2989_Rv2989|gene3053|transcript|Transcript_gene3053|Coding|1/1|c.454G>A|p.Ala152Thr|454/702|454/702|152/233||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3346600G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3346600G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:52:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:45:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:59:36:23:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:28 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:52 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 3348165 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv2991_Rv2991|gene3055|transcript|Transcript_gene3055|Coding|1/1|c.184G>A|p.Ala62Thr|184/492|184/492|62/163||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3348165G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3348165G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:26:13:13:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:23:14:38:97.37%:99:5.6582E-21:43:1:0:1:38 1/1:52:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:51:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:44:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:20:8:12:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:40:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:58:36:22:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:48:22:26:49:97.96%:99:1.9625E-27:39:1:1:0:50 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 3348830 . G A . PASS AC=12;AF=0.040;AN=300;ANN=A|missense_variant|MODERATE|gltS_Rv2992c|gene3058|transcript|Transcript_gene3058|Coding|1/1|c.1448C>T|p.Ala483Val|1448/1473|1448/1473|483/490||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3348830G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3348830G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:51 0/0:0:0:0:0:14:0%:25:1E0:47:14:7:7:14 0/0:0:0:0:0:44:0%:81:1E0:45:44:30:14:45 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:24 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:24:0%:44:1E0:46:24:19:5:25 0/0:0:0:0:0:40:0%:74:1E0:49:40:26:14:43 0/0:0:0:0:0:19:0%:37:1E0:49:19:10:9:20 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:18 0/0:0:0:0:0:39:0%:74:1E0:43:39:30:9:42 0/0:38:1:1:0:21:4.76%:31:5E-1:57:20:13:7:22 0/0:0:0:0:0:46:0%:85:1E0:43:46:30:16:48 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:21:8:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:22 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:18:5:25 0/0:0:0:0:0:63:0%:99:1E0:43:63:42:21:63 0/0:0:0:0:0:28:0%:51:1E0:51:28:16:12:29 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:36 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:26 0/0:0:0:0:0:20:0%:36:1E0:50:20:13:7:21 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:19:10:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:38:1:0:1:42:2.38%:66:5E-1:47:41:26:15:43 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:47 0/0:0:0:0:0:56:0%:99:1E0:46:56:29:27:56 0/0:0:0:0:0:55:0%:99:1E0:44:55:22:33:55 0/0:0:0:0:0:46:0%:85:1E0:45:46:28:18:47 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:36 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:30 0/0:0:0:0:0:45:0%:85:1E0:42:45:28:17:46 0/0:0:0:0:0:47:0%:89:1E0:43:47:31:16:47 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:45:0%:85:1E0:47:45:27:18:46 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:32 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:44 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:52:0%:96:1E0:44:52:30:22:52 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:57:0%:99:1E0:46:57:29:28:58 0/0:37:1:0:1:30:3.33%:44:5E-1:45:29:17:12:31 0/0:0:0:0:0:36:0%:66:1E0:47:36:22:14:36 0/0:0:0:0:0:47:0%:89:1E0:42:47:34:13:50 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:43 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:30 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:54:0%:99:1E0:46:54:33:21:54 0/0:0:0:0:0:26:0%:47:1E0:46:26:18:8:29 0/0:0:0:0:0:47:0%:89:1E0:49:47:27:20:49 0/0:0:0:0:0:17:0%:33:1E0:55:17:11:6:17 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:34 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:42 0/0:0:0:0:0:23:0%:44:1E0:48:23:14:9:23 0/0:0:0:0:0:44:0%:81:1E0:42:44:31:13:45 0/0:38:1:1:0:33:3.03%:52:5E-1:49:32:19:13:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:39 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:48 0/0:0:0:0:0:39:0%:74:1E0:45:39:25:14:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:24:8:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:36 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:43 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:50:34:23:11:35 0/0:0:0:0:0:26:0%:47:1E0:48:26:17:9:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:47 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:55:0%:99:1E0:41:55:33:22:57 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:34 1/1:41:30:21:9:31:96.77%:99:6.8754E-17:38:1:0:1:31 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:37 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:23:11:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:14:6:23 0/0:0:0:0:0:40:0%:74:1E0:47:40:29:11:41 1/1:44:30:14:16:31:96.77%:99:6.8754E-17:60:1:1:0:32 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:26:0%:48:1E0:41:25:14:11:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:35 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:32 0/0:0:0:0:0:42:0%:77:1E0:41:42:31:11:45 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:38 0/0:0:0:0:0:40:0%:74:1E0:48:40:25:15:42 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:32 0/0:0:0:0:0:58:0%:99:1E0:41:58:33:25:59 0/0:0:0:0:0:54:0%:99:1E0:43:54:32:22:55 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:63:0%:99:1E0:41:63:33:30:66 0/0:0:0:0:0:46:0%:85:1E0:38:46:27:19:49 0/0:0:0:0:0:63:0%:99:1E0:42:63:40:23:65 0/0:0:0:0:0:40:0%:74:1E0:38:40:21:19:41 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:42 0/0:0:0:0:0:39:0%:74:1E0:39:39:22:17:40 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:48 0/0:0:0:0:0:45:0%:85:1E0:41:45:30:15:45 0/0:0:0:0:0:50:0%:92:1E0:41:50:27:23:52 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:39 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:44 0/0:0:0:0:0:53:0%:99:1E0:38:53:30:23:57 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:50 0/0:0:0:0:0:51:0%:97:1E0:42:51:22:29:53 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:47 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:24 0/0:0:0:0:0:44:0%:81:1E0:42:44:29:15:45 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:48 0/0:0:0:0:0:75:0%:99:1E0:41:75:44:31:77 0/0:0:0:0:0:51:0%:97:1E0:41:51:22:29:54 MTB_anc 3348928 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|synonymous_variant|LOW|gltS_Rv2992c|gene3058|transcript|Transcript_gene3058|Coding|1/1|c.1350C>G|p.Pro450Pro|1350/1473|1350/1473|450/490||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3348928G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3348928G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:38:41:21:20:42 0/0:0:0:0:0:12:0%:21:1E0:49:12:7:5:12 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:0:0:0:0:23:0%:44:1E0:41:23:6:17:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:25 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:42 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:28:0%:51:1E0:43:28:8:20:29 0/0:60:1:1:0:19:5.26%:28:5E-1:39:18:6:12:21 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:49 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:15 0/0:0:0:0:0:41:0%:78:1E0:38:41:18:23:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:20:0%:36:1E0:40:20:5:15:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:6:14:22 0/0:0:0:0:0:17:0%:33:1E0:40:17:11:6:17 0/0:39:1:1:0:30:3.33%:44:5E-1:41:29:14:15:30 0/0:37:1:0:1:24:4.17%:34:5E-1:39:23:11:12:25 0/0:0:0:0:0:55:0%:99:1E0:39:55:27:28:55 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:10:24:35 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:23 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:26:0%:47:1E0:37:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:28 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:38:35:11:24:37 0/0:39:1:1:0:60:1.67%:98:5E-1:40:59:25:34:61 0/0:0:0:0:0:40:0%:74:1E0:41:40:11:29:42 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:38 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:34 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:40 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:37:1:1:0:40:2.5%:62:5E-1:41:39:21:18:40 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:33:1:0:1:31:3.23%:48:5E-1:41:30:12:18:31 0/0:39:1:0:1:14:7.14%:17:5E-1:40:13:7:6:14 0/0:0:0:0:0:38:0%:70:1E0:37:38:15:23:38 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:27 0/0:0:0:0:0:32:0%:59:1E0:37:32:15:17:34 0/0:0:0:0:0:51:0%:97:1E0:38:51:25:26:52 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:48:0%:89:1E0:39:48:22:26:51 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:35 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:30 0/0:0:0:0:0:61:0%:99:1E0:42:61:33:28:62 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:35:1:1:0:51:1.96%:84:5E-1:40:50:28:22:52 0/0:38:1:1:0:14:7.14%:17:5E-1:44:13:7:6:14 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:17 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:26 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:17 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:28 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:56 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:23 0/0:39:1:1:0:38:2.63%:58:5E-1:42:37:18:19:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:25 0/0:0:0:0:0:29:0%:55:1E0:38:29:9:20:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:34 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:38:1:1:0:32:3.12%:48:5E-1:40:31:18:13:34 0/0:0:0:0:0:33:0%:63:1E0:39:33:10:23:34 0/0:60:1:1:0:41:2.44%:66:5E-1:39:40:16:24:43 0/0:0:0:0:0:15:0%:29:1E0:39:15:3:12:16 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:19 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:31 0/0:0:0:0:0:22:0%:40:1E0:49:22:14:8:24 0/0:0:0:0:0:41:0%:78:1E0:37:41:20:21:43 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:41 0/0:0:0:0:0:43:0%:82:1E0:38:43:17:26:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:35 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:23 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:25 0/0:0:0:0:0:28:0%:51:1E0:35:28:11:17:28 0/0:0:0:0:0:29:0%:55:1E0:37:29:11:18:31 0/0:0:0:0:0:21:0%:40:1E0:39:21:6:15:21 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:31 0/0:0:0:0:0:22:0%:40:1E0:35:22:10:12:25 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:13 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:29:0%:55:1E0:39:29:8:21:31 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:34 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:24 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:26 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:18 0/0:0:0:0:0:14:0%:25:1E0:38:14:1:13:14 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:32 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:24 0/0:0:0:0:0:34:0%:62:1E0:37:34:16:18:35 0/0:0:0:0:0:25:0%:48:1E0:39:25:8:17:26 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:29 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:24 0/0:0:0:0:0:50:0%:92:1E0:38:50:18:32:50 0/0:0:0:0:0:44:0%:81:1E0:36:44:22:22:47 0/0:0:0:0:0:22:0%:40:1E0:39:22:8:14:22 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:23 0/0:0:0:0:0:54:0%:99:1E0:36:54:24:30:58 0/0:0:0:0:0:41:0%:78:1E0:37:41:18:23:43 0/0:0:0:0:0:54:0%:99:1E0:39:54:24:30:55 0/0:0:0:0:0:37:0%:70:1E0:35:37:16:21:42 0/0:0:0:0:0:32:0%:59:1E0:36:32:12:20:33 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:27 0/0:0:0:0:0:40:0%:74:1E0:37:40:19:21:40 0/0:0:0:0:0:33:0%:63:1E0:37:33:14:19:35 0/0:0:0:0:0:40:0%:74:1E0:38:40:14:26:41 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:39 0/0:0:0:0:0:27:0%:52:1E0:37:27:10:17:27 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:28 0/0:0:0:0:0:33:0%:63:1E0:37:33:19:14:35 0/0:0:0:0:0:48:0%:89:1E0:37:48:17:31:50 0/0:38:1:1:0:31:3.23%:48:5E-1:37:30:13:17:33 0/0:60:1:1:0:38:2.63%:58:5E-1:37:37:12:25:39 0/0:0:0:0:0:38:0%:70:1E0:38:38:11:27:40 0/0:0:0:0:0:27:0%:52:1E0:39:27:9:18:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:32 0/0:0:0:0:0:28:0%:51:1E0:38:28:10:18:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:32 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:21 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:42 0/0:0:0:0:0:40:0%:74:1E0:37:40:11:29:40 0/0:0:0:0:0:55:0%:99:1E0:38:55:19:36:57 0/0:0:0:0:0:36:0%:66:1E0:37:36:10:26:38 MTB_anc 3349449 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|gltS_Rv2992c|gene3058|transcript|Transcript_gene3058|Coding|1/1|c.829C>T|p.Pro277Ser|829/1473|829/1473|277/490||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3349449G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3349449G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:47:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:49:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:52:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:45:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:60:30:30:60:100%:99:1.035E-35:0:0:0:0:63 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:62:22:40:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 MTB_anc 3354113 . G A . PASS AC=14;AF=0.047;AN=300;ANN=A|synonymous_variant|LOW|serA1_Rv2996c|gene3062|transcript|Transcript_gene3062|Coding|1/1|c.957C>T|p.Val319Val|957/1587|957/1587|319/528||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3354113G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3354113G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:41:55:25:30:58 0/0:0:0:0:0:14:0%:25:1E0:42:14:5:9:14 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:41 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:20:0%:36:1E0:51:20:13:7:21 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:46 0/0:0:0:0:0:14:0%:25:1E0:45:14:4:10:14 0/0:0:0:0:0:48:0%:89:1E0:46:48:24:24:50 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:11:19:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:21 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:59:0%:99:1E0:43:59:23:36:61 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:37 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:7:17:24 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:36 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:46:31:11:20:31 0/0:38:1:0:1:32:3.12%:48:5E-1:45:31:18:13:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:37:1:1:0:35:2.86%:55:5E-1:42:34:14:20:36 0/0:60:1:1:0:34:2.94%:51:5E-1:42:33:10:23:34 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:23 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:37:0%:70:1E0:39:37:14:23:39 0/0:0:0:0:0:63:0%:99:1E0:46:63:36:27:64 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:41 0/0:0:0:0:0:57:0%:99:1E0:45:57:32:25:58 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:12:24:36 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:45 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:44 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:45 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:31 0/0:0:0:0:0:21:0%:40:1E0:52:21:10:11:21 0/0:38:1:1:0:41:2.44%:66:5E-1:42:40:12:28:43 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:14:35:50 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:39 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:39 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:30:0%:55:1E0:47:30:10:20:30 0/0:0:0:0:0:63:0%:99:1E0:47:63:30:33:64 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:37:0%:70:1E0:44:37:11:26:38 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:18:0%:32:1E0:52:18:10:8:19 0/0:0:0:0:0:36:0%:66:1E0:47:36:14:22:37 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:19:7:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:15:30:45 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:27:0%:52:1E0:51:27:12:15:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:28 0/0:0:0:0:0:13:0%:25:1E0:42:13:8:5:14 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:20 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:43 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:45:0%:85:1E0:45:45:17:28:45 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:41 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:45:0%:85:1E0:41:45:13:32:46 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:16:0%:29:1E0:41:16:5:11:17 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:26 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:36:1:1:0:35:2.86%:55:5E-1:41:34:16:18:39 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:40 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:50 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:45 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:24 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:23 0/0:0:0:0:0:50:0%:92:1E0:40:50:29:21:50 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:48 0/0:0:0:0:0:27:0%:52:1E0:38:27:8:19:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:15:26:42 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:34 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:38:1:1:0:40:2.5%:62:5E-1:42:39:17:22:40 0/0:0:0:0:0:60:0%:99:1E0:39:60:29:31:60 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:39 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:45 MTB_anc 3354425 . C A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|serA1_Rv2996c|gene3062|transcript|Transcript_gene3062|Coding|1/1|c.645G>T|p.Lys215Asn|645/1587|645/1587|215/528||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3354425C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3354425C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:44:53:22:31:54 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:44:0%:81:1E0:47:44:20:24:44 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:18:0%:32:1E0:53:18:10:8:18 0/0:0:0:0:0:28:0%:51:1E0:54:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:28 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:20 0/0:0:0:0:0:28:0%:51:1E0:47:28:9:19:28 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:19 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:11:0%:22:1E0:45:11:2:9:11 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:47 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:21:0%:40:1E0:52:21:9:12:22 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:20:29:49 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:47 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:45 0/0:0:0:0:0:45:0%:85:1E0:42:45:12:33:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:19 0/0:0:0:0:0:41:0%:78:1E0:42:41:13:28:41 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:67:0%:99:1E0:48:67:30:37:67 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:31 0/0:0:0:0:0:63:0%:99:1E0:46:63:31:32:64 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:37 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:42 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:21 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:38 0/0:0:0:0:0:50:0%:92:1E0:46:50:24:26:51 0/0:0:0:0:0:30:0%:55:1E0:45:30:9:21:31 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:47 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:13:0%:25:1E0:49:13:4:9:13 0/0:0:0:0:0:40:0%:74:1E0:46:40:13:27:40 0/0:0:0:0:0:15:0%:29:1E0:46:15:5:10:15 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:46 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:44 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:40 0/0:0:0:0:0:42:0%:77:1E0:48:42:18:24:43 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:28 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:51:0%:97:1E0:48:51:18:33:51 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:55:0%:99:1E0:45:55:20:35:55 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:54:1:0:1:30:3.33%:44:5E-1:46:29:15:14:30 0/0:0:0:0:0:26:0%:47:1E0:52:26:10:16:26 0/0:0:0:0:0:29:0%:55:1E0:52:29:15:14:31 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:16 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:28 0/0:0:0:0:0:51:0%:97:1E0:41:51:28:23:51 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:39:1:1:0:39:2.56%:62:5E-1:41:38:18:20:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:44 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:16 0/0:0:0:0:0:29:0%:55:1E0:49:29:11:18:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:24:0%:44:1E0:50:24:16:8:25 0/0:0:0:0:0:50:0%:92:1E0:38:50:15:35:50 0/0:0:0:0:0:23:0%:44:1E0:43:23:4:19:23 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:43 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:18:21:39 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:47:32:10:22:32 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:41:35:10:25:37 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:45 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:31 0/0:0:0:0:0:45:0%:85:1E0:39:45:26:19:47 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:53:0%:99:1E0:40:53:20:33:53 0/0:0:0:0:0:55:0%:99:1E0:42:55:24:31:55 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:30 0/0:0:0:0:0:53:0%:99:1E0:41:53:23:30:55 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:46 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:33 0/0:0:0:0:0:47:0%:89:1E0:41:47:20:27:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:40 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:27 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:71:0%:99:1E0:40:71:33:38:71 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:42:0%:77:1E0:39:42:19:23:42 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:36 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:25 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:47:0%:89:1E0:44:47:18:29:47 0/0:0:0:0:0:33:0%:63:1E0:41:33:10:23:33 MTB_anc 3355161 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv2997_Rv2997|gene3063|transcript|Transcript_gene3063|Coding|1/1|c.63C>T|p.Arg21Arg|63/1443|63/1443|21/480||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3355161C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3355161C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:55:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:54:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:61:23:38:61:100%:99:2.609E-36:0:0:0:0:62 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:36:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:29:10:19:30:96.67%:99:2.6212E-16:38:1:1:0:32 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:42 MTB_anc 3367489 . T C . PASS AC=14;AF=0.047;AN=300;ANN=C|synonymous_variant|LOW|gatB_Rv3009c|gene3075|transcript|Transcript_gene3075|Coding|1/1|c.1305A>G|p.Glu435Glu|1305/1530|1305/1530|435/509||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3367489T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3367489T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 0/0:0:0:0:0:16:0%:29:1E0:50:16:11:5:16 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:47 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:36:0%:66:1E0:47:36:22:14:36 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:23 0/0:0:0:0:0:25:0%:48:1E0:50:25:15:10:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:35 0/0:0:0:0:0:20:0%:36:1E0:51:20:12:8:21 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:35 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:53:0%:99:1E0:44:53:20:33:53 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:34 0/0:0:0:0:0:32:0%:59:1E0:48:32:22:10:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:29 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:36:0%:66:1E0:47:36:13:23:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:51:0%:97:1E0:45:51:20:31:51 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:41 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:36 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:33 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 0/0:0:0:0:0:56:0%:99:1E0:42:56:25:31:56 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:54:0%:99:1E0:43:54:24:30:55 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:48:37:22:15:37 0/0:0:0:0:0:59:0%:99:1E0:45:59:26:33:59 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:41 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:20 0/0:0:0:0:0:37:0%:70:1E0:51:37:22:15:37 0/0:0:0:0:0:38:0%:70:1E0:47:38:14:24:39 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:48 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:48 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:39 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:25:18:43 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:29:0%:55:1E0:50:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:48:23:14:9:23 0/0:0:0:0:0:43:0%:82:1E0:47:43:24:19:44 0/0:0:0:0:0:21:0%:40:1E0:52:21:7:14:22 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:16:0%:29:1E0:54:16:6:10:17 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:43 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 0/0:0:0:0:0:51:0%:97:1E0:44:51:22:29:51 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:30 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:31 0/0:0:0:0:0:19:0%:37:1E0:43:19:12:7:20 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:18 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:49:0%:93:1E0:40:49:26:23:51 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:37 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:45 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:40 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:52 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:40 0/0:0:0:0:0:34:0%:62:1E0:38:34:14:20:34 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:42 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:32 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:51:0%:97:1E0:41:51:33:18:53 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:45 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:36 0/0:0:0:0:0:46:0%:85:1E0:40:46:31:15:47 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:26:9:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:23 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:56:0%:99:1E0:40:56:32:24:57 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:28 MTB_anc 3368965 . T G . PASS AC=14;AF=0.047;AN=300;ANN=G|missense_variant|MODERATE|pfkA_Rv3010c|gene3076|transcript|Transcript_gene3076|Coding|1/1|c.890A>C|p.Asp297Ala|890/1032|890/1032|297/343||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3368965T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3368965T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:25:0%:48:1E0:50:25:15:10:26 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:49 0/0:0:0:0:0:21:0%:40:1E0:47:21:16:5:21 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:23 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:40 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:23 0/0:0:0:0:0:24:0%:44:1E0:49:24:14:10:26 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:35 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:22 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:20 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:21 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:17 0/0:0:0:0:0:17:0%:33:1E0:54:17:9:8:18 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:17 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:47 0/0:0:0:0:0:33:0%:63:1E0:51:33:10:23:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:34 0/0:0:0:0:0:10:0%:17:1E0:45:10:5:5:10 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:21 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:26 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:41 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:15 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:18 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:11:22:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:43 0/0:0:0:0:0:69:0%:99:1E0:46:69:41:28:71 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:40 0/0:0:0:0:0:14:0%:25:1E0:41:14:10:4:15 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:0:0:0:0:14:0%:25:1E0:42:14:6:8:14 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:13:0%:25:1E0:52:13:6:7:14 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:44 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:50 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:60:0%:99:1E0:42:60:33:27:63 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:45 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:36 0/0:0:0:0:0:60:0%:99:1E0:45:60:33:27:60 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:51:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:37:0%:70:1E0:50:37:20:17:37 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:33 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:18 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:36 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:19:0%:37:1E0:51:19:9:10:20 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:24:0%:44:1E0:46:24:17:7:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:51:0%:97:1E0:43:51:31:20:51 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:26 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:38 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:21 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:37 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:36 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:56 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:19 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:21 0/0:0:0:0:0:51:0%:97:1E0:45:51:17:34:51 0/0:0:0:0:0:53:0%:99:1E0:41:53:34:19:54 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:31 0/0:0:0:0:0:15:0%:29:1E0:46:15:8:7:16 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:44 0/0:0:0:0:0:47:0%:89:1E0:39:47:28:19:49 0/0:0:0:0:0:53:0%:99:1E0:38:53:28:25:54 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:39 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:45 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:60:1:0:1:29:3.45%:45:5E-1:39:28:9:19:29 0/0:0:0:0:0:53:0%:99:1E0:38:53:30:23:56 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:53 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:42 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:35:0%:67:1E0:39:35:22:13:37 MTB_anc 3369869 . T G . PASS AC=298;AF=1.00;AN=298;ANN=G|intergenic_region|MODIFIER|pfkA_Rv3010c-gatA_Rv3011c|gene3076-gene3077|intergenic_region|gene3076-gene3077|||n.3369869T>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:22:16:6:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:42:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:36:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:35:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:20:14:6:21:95.24%:99:4.0873E-11:39:1:0:1:22 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:36:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:35:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:34:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 MTB_anc 3371260 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|gatA_Rv3011c|gene3077|transcript|Transcript_gene3077|Coding|1/1|c.175G>A|p.Val59Ile|175/1485|175/1485|59/494||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3371260C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3371260C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:61:35:26:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:51:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:50:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:53:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:36:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:19:12:32:96.88%:99:1.8007E-17:37:1:0:1:33 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 MTB_anc 3371764 . A C . PASS AC=4;AF=0.013;AN=300;ANN=C|intergenic_region|MODIFIER|gatC_Rv3012c-Rv3013_Rv3013|gene3078-gene3079|intergenic_region|gene3078-gene3079|||n.3371764A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:10:0%:17:1E0:46:10:6:4:10 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:31 0/0:0:0:0:0:10:0%:17:1E0:48:10:4:6:10 0/0:0:0:0:0:16:0%:29:1E0:41:16:7:9:16 0/0:0:0:0:0:16:0%:29:1E0:44:16:4:12:16 0/0:0:0:0:0:21:0%:40:1E0:53:21:8:13:21 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:25 0/0:0:0:0:0:17:0%:33:1E0:49:17:7:10:17 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:20 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:25 0/0:0:0:0:0:10:0%:17:1E0:46:10:3:7:10 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:34 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:18 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:16:0%:29:1E0:41:16:7:9:17 0/0:0:0:0:0:10:0%:17:1E0:46:10:4:6:10 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:15 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:30 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:25 0/0:0:0:0:0:17:0%:33:1E0:47:17:12:5:17 0/0:0:0:0:0:16:0%:29:1E0:50:16:9:7:16 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:28 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:7:18:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:25:0%:48:1E0:48:25:8:17:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:34 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:19 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:32 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:22 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:40 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:50:26:11:15:26 0/0:0:0:0:0:11:0%:22:1E0:49:11:4:7:11 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:24 0/0:0:0:0:0:9:0%:18:1E0:45:9:5:4:9 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:23 0/0:0:0:0:0:17:0%:33:1E0:50:17:8:9:18 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:30 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:22 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:29 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:21 0/0:0:0:0:0:20:0%:36:1E0:50:20:6:14:20 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:24 0/0:0:0:0:0:42:0%:77:1E0:48:42:13:29:42 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:11:0%:22:1E0:43:11:2:9:11 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/0:0:0:0:0:22:0%:40:1E0:48:22:6:16:22 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:39 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:26 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:17 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:48:24:8:16:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:35 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 0/0:0:0:0:0:18:0%:32:1E0:44:18:6:12:18 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:19:0%:37:1E0:45:19:3:16:19 0/0:0:0:0:0:9:0%:18:1E0:47:9:1:8:10 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:17:0%:33:1E0:42:17:3:14:17 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:27 0/0:0:0:0:0:18:0%:32:1E0:53:18:8:10:18 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:38 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:29 0/0:0:0:0:0:14:0%:25:1E0:46:14:5:9:14 1/1:36:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:15 0/0:0:0:0:0:17:0%:33:1E0:47:17:8:9:18 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:6:17:23 0/0:0:0:0:0:13:0%:25:1E0:44:13:6:7:13 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:16 0/0:0:0:0:0:13:0%:25:1E0:40:13:5:8:16 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:27 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:7:18:27 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:22 0/0:0:0:0:0:14:0%:25:1E0:44:14:6:8:14 0/0:0:0:0:0:16:0%:29:1E0:43:16:5:11:17 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:10:22:33 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:18 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:36 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:22 0/0:0:0:0:0:29:0%:55:1E0:41:29:8:21:31 0/0:0:0:0:0:25:0%:48:1E0:39:25:8:17:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:5:20:30 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:38:32:7:25:35 0/0:0:0:0:0:28:0%:51:1E0:38:28:8:20:29 0/0:0:0:0:0:24:0%:44:1E0:38:24:8:16:24 0/0:0:0:0:0:13:0%:25:1E0:41:13:7:6:13 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:28 0/0:0:0:0:0:21:0%:40:1E0:40:21:5:16:21 0/0:0:0:0:0:16:0%:29:1E0:48:16:6:10:16 0/0:0:0:0:0:17:0%:33:1E0:46:17:6:11:17 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:16:0%:29:1E0:40:16:6:10:17 0/0:0:0:0:0:14:0%:25:1E0:49:14:8:6:14 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:6:20:29 MTB_anc 3374067 . A C . PASS AC=124;AF=0.413;AN=300;ANN=C|missense_variant|MODERATE|ligA_Rv3014c|gene3080|transcript|Transcript_gene3080|Coding|1/1|c.554T>G|p.Val185Gly|554/2076|554/2076|185/691||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3374067A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3374067A>C||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:47:0%:89:1E0:47:47:18:29:47 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:17 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:30 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:44 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:21:0%:40:1E0:46:21:15:6:21 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:38 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 0/0:0:0:0:0:19:0%:37:1E0:50:19:11:8:19 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 0/0:0:0:0:0:40:0%:74:1E0:47:40:16:24:41 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:30:15:15:31:96.77%:99:6.8754E-17:37:1:1:0:32 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:49:0%:93:1E0:43:49:18:31:51 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 1/1:45:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:52:0%:96:1E0:50:52:24:28:53 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:38 1/1:43:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:28:0%:51:1E0:52:28:17:11:28 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:13:23:36 0/0:34:1:0:1:41:2.44%:66:5E-1:43:40:22:18:43 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:36 1/1:42:28:10:18:29:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:47:0%:89:1E0:43:47:19:28:48 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:37 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:26 0/0:0:0:0:0:49:0%:93:1E0:42:49:24:25:51 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:28 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:25:0%:48:1E0:50:25:16:9:25 1/1:46:26:13:13:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:34:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:34 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:25 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:38 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:49 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:41 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:37 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:46:0%:85:1E0:46:46:19:27:46 0/0:0:0:0:0:55:0%:99:1E0:43:55:23:32:56 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:26 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:24 0/0:0:0:0:0:52:0%:96:1E0:37:52:20:32:52 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:25:0%:48:1E0:36:25:12:13:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:36 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:45 0/0:24:1:0:1:43:2.33%:70:5E-1:43:42:20:22:43 0/0:0:0:0:0:31:0%:59:1E0:38:31:20:11:34 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:31 0/0:0:0:0:0:23:0%:44:1E0:37:23:14:9:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:7:16:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 1/1:39:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:36:20:16:37:97.3%:99:2.1762E-20:37:1:1:0:37 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:45 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:28 0/0:0:0:0:0:52:0%:96:1E0:46:52:26:26:54 1/1:42:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 3380439 . G GC . PASS AC=55;AF=0.982;AN=56;ANN=GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3380439_3380440insC||||||,GC|intragenic_variant|MODIFIER|PPE47_Rv3021c|gene3087|gene_variant|gene3087|||n.3380439_3380440insC||||||,GC|intragenic_variant|MODIFIER|PPE48_Rv3022c|gene3088|gene_variant|gene3088|||n.3380439_3380440insC||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:5:3:7:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:10:2:11:100%:64:3.698E-7:0:0:0:0:12 1/1:34:9:5:4:8:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:10:10:0:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:9:7:2:8:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:31:8:7:1:7:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:13:12:1:12:92.86%:64:3.7391E-7:37:1:1:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:9:7:2:8:100%:46:2.0568E-5:0:0:0:0:9 0/1:32:7:5:2:7:87.5%:31:6.993E-4:33:1:1:0:8 MTB_anc 3381641 . G T . PASS AC=18;AF=0.429;AN=42;ANN=T|missense_variant|MODERATE|Rv3023c_Rv3023c|gene3090|transcript|Transcript_gene3090|Coding|1/1|c.982C>A|p.Gln328Lys|982/1248|982/1248|328/415||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3381641G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3381641G>T||||||;HET=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:35:9:0:9:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:36:8:0:8:8 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:37:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:36:7:0:7:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:8:0%:14:1E0:35:8:0:8:8 1/1:37:28:1:27:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:9:0%:18:1E0:37:9:0:9:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 MTB_anc 3381767 . C T . PASS AC=2;AF=1.00;AN=2;ANN=T|missense_variant|MODERATE|Rv3023c_Rv3023c|gene3090|transcript|Transcript_gene3090|Coding|1/1|c.856G>A|p.Asp286Asn|856/1248|856/1248|286/415||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3381767C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3381767C>T||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3382598 . C T . PASS AC=11;AF=0.039;AN=284;ANN=T|missense_variant|MODERATE|Rv3023c_Rv3023c|gene3090|transcript|Transcript_gene3090|Coding|1/1|c.25G>A|p.Ala9Thr|25/1248|25/1248|9/415||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3382598C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3382598C>T||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:11:0%:22:1E0:40:11:5:6:12 0/0:0:0:0:0:11:0%:22:1E0:43:11:5:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:47:14:8:6:14 0/0:0:0:0:0:9:0%:18:1E0:44:9:3:6:9 0/0:48:2:2:0:11:18.18%:10:2.381E-1:46:9:4:5:11 0/0:0:0:0:0:14:0%:25:1E0:48:14:5:9:15 0/0:0:0:0:0:8:0%:14:1E0:43:8:5:3:9 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:7:0%:14:1E0:47:7:6:1:7 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:10:0%:17:1E0:48:10:5:5:10 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:14 0/0:0:0:0:0:11:0%:22:1E0:41:11:6:5:12 0/0:0:0:0:0:7:0%:14:1E0:47:7:5:2:8 0/0:0:0:0:0:14:0%:25:1E0:47:14:4:10:14 0/0:0:0:0:0:14:0%:25:1E0:44:14:8:6:14 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:15 0/0:0:0:0:0:15:0%:29:1E0:50:15:10:5:15 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:23 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:45:14:6:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:45:7:2:5:8 0/0:60:1:1:0:19:5.26%:28:5E-1:40:18:9:9:19 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:15 0/0:0:0:0:0:11:0%:22:1E0:43:11:6:5:11 0/0:0:0:0:0:9:0%:18:1E0:52:9:4:5:9 0/0:0:0:0:0:7:0%:14:1E0:43:7:3:4:7 0/0:0:0:0:0:12:0%:21:1E0:48:12:5:7:12 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:17 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:12:0%:21:1E0:45:12:5:7:12 0/0:0:0:0:0:15:0%:29:1E0:45:15:11:4:16 0/0:0:0:0:0:15:0%:29:1E0:40:15:10:5:15 0/0:0:0:0:0:12:0%:21:1E0:44:12:5:7:13 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:12 0/0:0:0:0:0:8:0%:14:1E0:40:8:3:5:8 0/0:0:0:0:0:11:0%:22:1E0:45:11:6:5:11 0/0:0:0:0:0:16:0%:29:1E0:39:16:12:4:16 0/0:0:0:0:0:10:0%:17:1E0:40:10:5:5:10 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:17 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:23 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:15:0%:29:1E0:47:15:7:8:16 0/0:32:1:0:1:12:8.33%:14:5E-1:44:11:7:4:12 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:19 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:21 0/0:0:0:0:0:11:0%:22:1E0:41:11:9:2:11 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:23 0/0:0:0:0:0:18:0%:32:1E0:39:18:13:5:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:14:0%:25:1E0:45:14:8:6:14 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:24:0%:44:1E0:49:24:14:10:24 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:19 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:14 0/0:0:0:0:0:7:0%:14:1E0:46:7:4:3:7 0/0:0:0:0:0:9:0%:18:1E0:42:9:6:3:9 0/0:0:0:0:0:19:0%:37:1E0:44:19:13:6:20 0/0:0:0:0:0:12:0%:21:1E0:44:12:4:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:46:12:7:5:12 0/0:0:0:0:0:14:0%:25:1E0:41:14:9:5:15 0/0:0:0:0:0:9:0%:18:1E0:42:9:6:3:9 0/0:0:0:0:0:15:0%:29:1E0:39:15:6:9:15 0/0:0:0:0:0:11:0%:22:1E0:42:11:7:4:11 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:10 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:18 0/0:0:0:0:0:8:0%:14:1E0:46:8:5:3:8 0/0:60:2:2:0:26:7.69%:30:2.451E-1:45:24:15:9:27 0/0:0:0:0:0:12:0%:21:1E0:45:12:8:4:12 0/0:0:0:0:0:15:0%:29:1E0:46:15:10:5:15 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:19 0/0:0:0:0:0:13:0%:25:1E0:44:13:9:4:13 0/0:0:0:0:0:13:0%:25:1E0:44:13:8:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:13:0%:25:1E0:45:13:8:5:13 0/0:0:0:0:0:15:0%:29:1E0:46:15:8:7:15 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:9:0%:18:1E0:52:9:3:6:9 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:30 0/0:0:0:0:0:13:0%:25:1E0:41:13:6:7:13 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:15:0%:29:1E0:42:15:8:7:15 0/0:0:0:0:0:8:0%:14:1E0:45:8:5:3:8 1/1:41:15:8:7:16:93.75%:75:2.8282E-8:60:1:1:0:16 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:17 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 0/1:43:11:4:7:16:68.75%:44:3.3854E-5:51:5:1:4:16 1/1:43:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:10 0/0:60:1:0:1:17:5.88%:24:5E-1:40:16:10:6:17 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:10 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 0/0:30:1:0:1:16:6.25%:21:5E-1:42:15:9:6:16 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:19 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:19 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:15 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:24 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:19 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:15 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:30 0/0:0:0:0:0:11:0%:22:1E0:45:11:7:4:11 0/0:0:0:0:0:11:0%:22:1E0:46:11:4:7:12 0/0:0:0:0:0:25:0%:48:1E0:39:25:18:7:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:21 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:35 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:22 0/0:0:0:0:0:24:0%:44:1E0:37:24:18:6:24 0/0:0:0:0:0:26:0%:47:1E0:40:26:19:7:26 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:21 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:17 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:22 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:18 0/0:0:0:0:0:21:0%:40:1E0:40:21:15:6:21 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:17 0/0:0:0:0:0:24:0%:44:1E0:38:24:19:5:24 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 0/0:0:0:0:0:10:0%:17:1E0:43:10:3:7:10 0/0:0:0:0:0:10:0%:17:1E0:40:10:4:6:10 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:13:0%:25:1E0:41:13:9:4:13 0/0:0:0:0:0:9:0%:18:1E0:44:9:7:2:9 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:18 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:17 0/0:0:0:0:0:21:0%:40:1E0:46:21:15:6:23 0/0:0:0:0:0:26:0%:47:1E0:39:26:18:8:26 MTB_anc 3390059 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv3031_Rv3031|gene3098|transcript|Transcript_gene3098|Coding|1/1|c.138G>A|p.Pro46Pro|138/1581|138/1581|46/526||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3390059G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3390059G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:52:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:61:22:39:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:14:10:25:96%:99:2.0568E-13:39:1:0:1:27 1/1:49:27:11:16:28:96.43%:99:3.7915E-15:32:1:0:1:28 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:22:5:28:96.43%:99:3.7915E-15:60:1:0:1:29 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:14:4:10:15:93.33%:69:1.0315E-7:38:1:0:1:15 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:50:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:49:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:38:17:21:39:97.44%:99:1.4697E-21:38:1:1:0:40 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:53:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:65:29:36:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:58:18:40:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:62:26:36:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:60:29:31:60:100%:99:1.035E-35:0:0:0:0:61 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:57:20:37:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:61:23:38:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:36:20:16:37:97.3%:99:2.1762E-20:60:1:0:1:38 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 3390640 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv3031_Rv3031|gene3098|transcript|Transcript_gene3098|Coding|1/1|c.719C>T|p.Pro240Leu|719/1581|719/1581|240/526||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3390640C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3390640C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:15:0%:29:1E0:52:15:8:7:16 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:40 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:20 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:17 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:25 0/0:0:0:0:0:25:0%:48:1E0:49:25:16:9:25 0/0:0:0:0:0:18:0%:32:1E0:47:18:5:13:18 0/0:0:0:0:0:22:0%:40:1E0:51:22:13:9:24 0/0:0:0:0:0:31:0%:59:1E0:49:31:21:10:32 0/0:0:0:0:0:23:0%:44:1E0:50:23:10:13:23 0/0:0:0:0:0:48:0%:89:1E0:44:48:32:16:50 0/0:0:0:0:0:17:0%:33:1E0:56:17:9:8:17 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:17:0%:33:1E0:45:17:11:6:18 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:50:0%:92:1E0:43:50:21:29:52 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:13:0%:25:1E0:40:13:3:10:14 0/0:0:0:0:0:18:0%:32:1E0:44:18:5:13:18 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:24 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:44:0%:81:1E0:49:44:25:19:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:37 0/0:0:0:0:0:51:0%:97:1E0:44:51:22:29:51 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:25:0%:48:1E0:42:25:8:17:25 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:54:0%:99:1E0:42:54:23:31:54 0/0:0:0:0:0:38:0%:70:1E0:47:38:18:20:38 0/0:0:0:0:0:20:0%:36:1E0:51:20:7:13:21 0/0:0:0:0:0:44:0%:81:1E0:41:44:15:29:44 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:38:1:1:0:39:2.56%:62:5E-1:40:38:16:22:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:33 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:48 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:39:0%:74:1E0:47:39:15:24:41 0/0:0:0:0:0:52:0%:96:1E0:46:52:28:24:53 0/0:0:0:0:0:26:0%:47:1E0:43:26:9:17:28 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:33:1:0:1:16:6.25%:21:5E-1:44:15:9:6:17 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:18:0%:32:1E0:51:18:8:10:19 0/0:0:0:0:0:37:0%:70:1E0:49:37:15:22:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:6:23:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:43 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:45 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:38:1:0:1:38:2.63%:58:5E-1:41:37:22:15:38 0/1:43:11:5:6:37:29.73%:36:2.0455E-4:43:26:12:14:40 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:34 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:40:0%:74:1E0:51:40:25:15:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:33 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:47 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:56:0%:99:1E0:43:56:27:29:57 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:22:0%:40:1E0:45:22:16:6:22 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:18 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:60:1:1:0:42:2.38%:66:5E-1:46:41:26:15:42 0/0:37:1:1:0:30:3.33%:44:5E-1:43:29:17:12:31 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:49 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:27 0/0:0:0:0:0:43:0%:82:1E0:41:43:14:29:46 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:40 0/0:0:0:0:0:38:0%:70:1E0:47:38:14:24:41 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:46 0/0:0:0:0:0:56:0%:99:1E0:42:56:20:36:57 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:48 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:36 0/0:0:0:0:0:46:0%:85:1E0:42:46:19:27:47 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:37 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:45 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:34 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:34 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:41 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:0:0:0:0:35:0%:67:1E0:47:35:12:23:36 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:52:0%:96:1E0:39:52:23:29:54 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:46 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:44 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:46 0/0:0:0:0:0:60:0%:99:1E0:45:60:30:30:62 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 MTB_anc 3395055 . T A . PASS AC=4;AF=0.013;AN=300;ANN=A|intergenic_region|MODIFIER|Rv3034c_Rv3034c-Rv3035_Rv3035|gene3102-gene3103|intergenic_region|gene3102-gene3103|||n.3395055T>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:41 0/0:0:0:0:0:22:0%:40:1E0:40:22:16:6:23 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:47 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:11 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:16 0/0:0:0:0:0:32:0%:59:1E0:39:32:25:7:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:17:9:27 0/0:0:0:0:0:15:0%:29:1E0:39:15:11:4:16 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:0:0:0:0:40:0%:74:1E0:38:40:26:14:41 0/0:0:0:0:0:12:0%:21:1E0:46:12:7:5:12 0/0:0:0:0:0:50:0%:92:1E0:38:50:33:17:51 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:21 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:27 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:19:4:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 0/0:0:0:0:0:39:0%:74:1E0:38:39:22:17:39 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:24:0%:44:1E0:37:24:15:9:24 0/0:0:0:0:0:14:0%:25:1E0:44:14:9:5:16 0/0:0:0:0:0:21:0%:40:1E0:41:21:17:4:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:18 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:34 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:30 0/0:0:0:0:0:21:0%:40:1E0:39:21:15:6:21 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:20:6:27 0/0:0:0:0:0:59:0%:99:1E0:39:59:34:25:61 0/0:0:0:0:0:41:0%:78:1E0:39:41:26:15:41 0/0:0:0:0:0:27:0%:52:1E0:38:27:18:9:27 0/0:0:0:0:0:20:0%:36:1E0:38:20:14:6:21 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:15:6:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:37:30:22:8:30 0/0:0:0:0:0:22:0%:40:1E0:38:22:14:8:23 0/0:0:0:0:0:25:0%:48:1E0:41:25:17:8:25 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:36:0%:66:1E0:38:36:30:6:37 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:35 0/0:0:0:0:0:13:0%:25:1E0:41:13:8:5:13 0/0:0:0:0:0:25:0%:48:1E0:37:25:17:8:25 0/0:0:0:0:0:20:0%:36:1E0:38:20:13:7:20 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:23 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:31 0/0:0:0:0:0:44:0%:81:1E0:39:44:34:10:45 0/0:0:0:0:0:36:0%:66:1E0:38:36:25:11:36 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:21 0/0:0:0:0:0:44:0%:81:1E0:39:44:34:10:45 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:42 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:24 0/0:0:0:0:0:29:0%:55:1E0:37:29:17:12:30 0/0:0:0:0:0:24:0%:44:1E0:38:24:17:7:24 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:21 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:24 0/0:0:0:0:0:45:0%:85:1E0:38:45:26:19:46 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:38 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:10:0%:17:1E0:40:10:6:4:10 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:45:0%:85:1E0:40:45:33:12:45 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:17 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:40:0%:74:1E0:38:40:24:16:42 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:16 0/0:0:0:0:0:31:0%:59:1E0:40:31:22:9:31 0/0:0:0:0:0:28:0%:51:1E0:37:28:20:8:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:21 0/0:0:0:0:0:35:0%:67:1E0:37:35:23:12:35 0/0:0:0:0:0:27:0%:52:1E0:38:27:21:6:27 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:37:31:21:10:31 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:20 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:34 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:20:11:33 0/0:0:0:0:0:28:0%:51:1E0:37:28:20:8:30 0/0:0:0:0:0:32:0%:59:1E0:38:32:21:11:34 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:23 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:24:0%:44:1E0:37:24:15:9:24 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:30 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:19 0/0:0:0:0:0:27:0%:52:1E0:38:27:20:7:27 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:27 0/0:0:0:0:0:23:0%:44:1E0:36:23:15:8:24 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:16 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:27 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:36 0/0:0:0:0:0:21:0%:40:1E0:39:21:13:8:21 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:23 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:23 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:24 0/0:0:0:0:0:34:0%:62:1E0:38:34:20:14:34 0/0:0:0:0:0:22:0%:40:1E0:36:22:14:8:24 0/0:0:0:0:0:30:0%:55:1E0:37:30:20:10:31 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:23 0/0:0:0:0:0:25:0%:48:1E0:37:25:19:6:27 0/0:0:0:0:0:44:0%:81:1E0:39:44:24:20:44 0/0:0:0:0:0:48:0%:89:1E0:38:48:31:17:48 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:18 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:27 0/0:0:0:0:0:33:0%:63:1E0:37:33:21:12:37 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:24 0/0:0:0:0:0:41:0%:78:1E0:38:41:29:12:43 0/0:0:0:0:0:30:0%:55:1E0:37:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:28 0/0:0:0:0:0:32:0%:59:1E0:37:32:19:13:34 0/0:0:0:0:0:47:0%:89:1E0:37:47:25:22:48 0/0:0:0:0:0:30:0%:55:1E0:38:30:22:8:30 0/0:36:1:0:1:40:2.5%:62:5E-1:38:39:29:10:43 0/0:0:0:0:0:38:0%:70:1E0:38:38:25:13:41 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:20 0/0:0:0:0:0:32:0%:59:1E0:37:32:22:10:32 0/0:0:0:0:0:28:0%:51:1E0:38:28:21:7:28 0/0:0:0:0:0:44:0%:81:1E0:38:44:30:14:44 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:36:0%:66:1E0:37:36:23:13:36 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:38:29:19:10:30 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:34 0/0:0:0:0:0:31:0%:59:1E0:39:31:23:8:31 0/0:0:0:0:0:14:0%:25:1E0:39:14:12:2:14 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:26:11:38 0/0:0:0:0:0:49:0%:93:1E0:39:49:36:13:49 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:26 MTB_anc 3397684 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv3037c_Rv3037c|gene3105|transcript|Transcript_gene3105|Coding|1/1|c.607G>T|p.Gly203Trp|607/1077|607/1077|203/358||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3397684C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3397684C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3397684C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:50 0/0:0:0:0:0:13:0%:25:1E0:43:13:6:7:13 0/0:0:0:0:0:48:0%:89:1E0:45:48:21:27:48 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:34 0/0:34:1:0:1:25:4%:38:5E-1:42:24:11:13:25 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:47:25:7:18:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:19 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:13:0%:25:1E0:47:13:7:6:13 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:47 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:10:25:35 0/0:60:1:0:1:17:5.88%:24:5E-1:46:16:10:6:17 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:6:22:28 0/0:0:0:0:0:49:0%:93:1E0:45:49:21:28:49 0/0:34:1:0:1:20:5%:27:5E-1:46:19:6:13:20 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:34 0/0:0:0:0:0:46:0%:85:1E0:42:46:18:28:46 0/0:0:0:0:0:15:0%:29:1E0:48:15:13:2:15 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:38:1:0:1:30:3.33%:44:5E-1:45:29:15:14:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:35 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:32 0/0:0:0:0:0:43:0%:82:1E0:48:43:20:23:43 0/0:0:0:0:0:38:0%:70:1E0:47:38:14:24:38 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:28 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:16:0%:29:1E0:48:16:10:6:17 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:60:1:0:1:26:3.85%:38:5E-1:41:25:7:18:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:41 0/0:0:0:0:0:56:0%:99:1E0:42:56:27:29:56 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:43 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:45 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:42 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:50 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:46:0%:85:1E0:45:46:25:21:46 0/0:60:1:0:1:27:3.7%:41:5E-1:47:26:9:17:28 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:29 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:48 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:47:33:12:21:33 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:44:0%:81:1E0:47:44:20:24:44 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:35 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:51:0%:97:1E0:39:51:30:21:51 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:50:0%:92:1E0:42:50:24:26:50 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:38 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:43 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:40 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:28 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:46 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:26 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:35:1:0:1:31:3.23%:48:5E-1:37:30:14:16:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:30 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:15 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:50 0/0:0:0:0:0:47:0%:89:1E0:41:47:19:28:47 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:34 0/0:0:0:0:0:50:0%:92:1E0:38:50:20:30:50 0/0:0:0:0:0:56:0%:99:1E0:40:56:33:23:57 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:35 0/0:0:0:0:0:49:0%:93:1E0:40:49:30:19:51 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:27 0/0:37:1:1:0:43:2.33%:70:5E-1:38:42:22:20:44 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:30 0/0:0:0:0:0:41:0%:78:1E0:37:41:23:18:41 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:46 0/0:0:0:0:0:36:0%:66:1E0:38:36:14:22:36 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:61:0%:99:1E0:39:61:28:33:63 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:45 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:38:1:1:0:41:2.44%:66:5E-1:46:40:20:20:41 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:48:0%:89:1E0:45:48:26:22:48 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 MTB_anc 3398223 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3037c_Rv3037c|gene3105|transcript|Transcript_gene3105|Coding|1/1|c.68C>T|p.Ala23Val|68/1077|68/1077|23/358||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3398223G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3398223G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3398223G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:50:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:50:27:23:51:100%:99:9.9117E-30:0:0:0:0:54 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:27:17:10:28:96.43%:99:3.7915E-15:37:1:1:0:28 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:14:14:29:96.55%:99:9.9776E-16:38:1:0:1:30 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:26:13:13:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:47:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:40:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:66 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:66:31:35:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 MTB_anc 3398228 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv3037c_Rv3037c|gene3105|transcript|Transcript_gene3105|Coding|1/1|c.63C>G|p.Arg21Arg|63/1077|63/1077|21/358||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3398228G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3398228G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3398228G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:52:29:23:53:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:18:10:29:96.55%:99:9.9776E-16:32:1:1:0:30 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:28:14:14:29:96.55%:99:9.9776E-16:38:1:0:1:30 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:47:23:24:48:97.92%:99:6.1512E-28:0:0:0:0:49 1/1:51:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:53:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:50:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:38:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:69:37:32:69:100%:99:4.233E-41:0:0:0:0:69 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:38:20:18:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:64:29:35:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 MTB_anc 3399728 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|echA17_Rv3039c|gene3107|transcript|Transcript_gene3107|Coding|1/1|c.456C>T|p.Thr152Thr|456/765|456/765|152/254||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3399728G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3399728G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:46:42:24:18:44 0/0:0:0:0:0:15:0%:29:1E0:49:15:4:11:15 0/0:0:0:0:0:43:0%:82:1E0:46:43:14:29:43 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:23 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:21:0%:40:1E0:40:21:6:15:23 0/0:0:0:0:0:34:0%:62:1E0:49:34:20:14:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:21:0%:40:1E0:45:21:7:14:21 0/0:0:0:0:0:25:0%:48:1E0:51:25:11:14:25 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:0:0:0:0:8:0%:14:1E0:43:8:4:4:8 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:20 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:33 0/0:0:0:0:0:49:0%:93:1E0:44:49:16:33:50 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:25 0/0:0:0:0:0:36:0%:66:1E0:47:36:25:11:36 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:26 0/0:0:0:0:0:23:0%:44:1E0:48:23:7:16:23 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:34:0%:62:1E0:47:34:7:27:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:10:22:33 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:43 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:55:0%:99:1E0:47:55:24:31:56 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:37 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:41 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:33 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:37 0/0:0:0:0:0:15:0%:29:1E0:47:15:5:10:15 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:47 0/0:0:0:0:0:14:0%:25:1E0:46:14:7:7:14 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:37 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:44 0/0:0:0:0:0:37:0%:70:1E0:40:37:14:23:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:43 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:30 0/0:0:0:0:0:36:0%:66:1E0:39:36:11:25:36 0/0:0:0:0:0:22:0%:40:1E0:50:22:6:16:23 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:49:0%:93:1E0:47:49:23:26:50 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:34 0/0:0:0:0:0:54:0%:99:1E0:46:54:27:27:55 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:20 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:33:0%:63:1E0:50:33:13:20:33 0/0:39:1:1:0:25:4%:38:5E-1:45:24:9:15:25 0/0:60:1:1:0:37:2.7%:59:5E-1:50:36:16:20:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:49:2:2:0:41:4.88%:57:2.4691E-1:43:39:16:23:41 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:8:20:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:50 0/0:0:0:0:0:35:0%:67:1E0:45:35:11:24:35 0/0:0:0:0:0:19:0%:37:1E0:46:19:5:14:19 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:39 0/0:0:0:0:0:10:0%:17:1E0:44:10:5:5:10 1/1:49:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:55:0%:99:1E0:41:55:26:29:58 0/0:0:0:0:0:33:0%:63:1E0:43:33:9:24:33 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:45 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:30 0/0:0:0:0:0:38:0%:70:1E0:42:38:14:24:40 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:29 0/0:30:1:0:1:39:2.56%:62:5E-1:42:38:16:22:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:9:24:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:33 0/0:0:0:0:0:49:0%:93:1E0:40:49:19:30:50 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:20 0/0:0:0:0:0:63:0%:99:1E0:42:63:29:34:64 0/0:0:0:0:0:62:0%:99:1E0:41:62:24:38:62 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:26 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:24 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:41 0/0:0:0:0:0:40:0%:74:1E0:40:40:14:26:40 0/0:0:0:0:0:36:0%:66:1E0:39:36:11:25:37 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:40 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:45 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:43 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:43 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 0/0:0:0:0:0:39:0%:74:1E0:38:39:24:15:41 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:28 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:32 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 0/0:0:0:0:0:56:0%:99:1E0:40:56:20:36:57 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:48 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:35 0/0:37:1:1:0:45:2.22%:73:5E-1:43:44:26:18:48 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 MTB_anc 3415069 . TA T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|intergenic_region|MODIFIER|nrdH_Rv3053c-Rv3054c_Rv3054c|gene3121-gene3122|intergenic_region|gene3121-gene3122|||n.3415070delA||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:13:0%:25:1E0:53:13:6:7:13 0/0:0:0:0:0:55:0%:99:1E0:47:55:28:27:55 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:48:0%:89:1E0:51:48:28:20:48 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:52:37:19:18:38 0/0:0:0:0:0:41:0%:78:1E0:49:41:18:23:41 0/0:0:0:0:0:36:0%:66:1E0:49:36:17:19:37 0/0:0:0:0:0:40:0%:74:1E0:49:40:21:19:41 0/0:0:0:0:0:32:0%:59:1E0:52:32:18:14:33 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:43 0/0:0:0:0:0:26:0%:47:1E0:48:26:9:17:26 0/0:0:0:0:0:45:0%:85:1E0:47:45:19:26:47 0/0:0:0:0:0:33:0%:63:1E0:50:33:27:6:33 0/0:0:0:0:0:14:0%:25:1E0:48:14:6:8:14 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:50:0%:92:1E0:46:50:26:24:51 0/0:0:0:0:0:42:0%:77:1E0:50:42:21:21:43 0/0:0:0:0:0:47:0%:89:1E0:47:47:25:22:48 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:32 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:23 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:39:0%:74:1E0:50:39:24:15:40 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:37:0%:70:1E0:51:37:21:16:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:47:0%:89:1E0:48:47:23:24:48 0/0:0:0:0:0:53:0%:99:1E0:48:53:32:21:56 0/0:0:0:0:0:46:0%:85:1E0:48:46:24:22:46 0/0:0:0:0:0:48:0%:89:1E0:48:48:24:24:48 0/0:0:0:0:0:21:0%:40:1E0:44:21:17:4:21 0/0:0:0:0:0:41:0%:78:1E0:45:41:28:13:41 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:48:0%:89:1E0:47:48:33:15:48 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:39 0/0:0:0:0:0:52:0%:96:1E0:46:52:31:21:54 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:39:0%:74:1E0:47:39:26:13:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:48:0%:89:1E0:50:48:26:22:48 0/0:0:0:0:0:28:0%:51:1E0:51:28:11:17:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:42 0/0:0:0:0:0:31:0%:59:1E0:50:31:14:17:31 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:56:0%:99:1E0:44:56:31:25:56 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:44 0/0:0:0:0:0:40:0%:74:1E0:50:40:18:22:40 0/0:0:0:0:0:14:0%:25:1E0:50:14:10:4:14 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:49:0%:93:1E0:48:49:26:23:50 0/0:0:0:0:0:41:0%:78:1E0:49:41:28:13:41 0/0:0:0:0:0:32:0%:59:1E0:53:32:23:9:32 0/0:0:0:0:0:41:0%:78:1E0:50:41:24:17:41 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:43 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:43:0%:82:1E0:49:43:23:20:44 0/0:0:0:0:0:40:0%:74:1E0:47:40:26:14:41 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:35 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:43 0/0:0:0:0:0:46:0%:85:1E0:47:46:26:20:46 0/0:37:1:1:0:23:4.35%:34:5E-1:44:22:16:6:23 0/0:0:0:0:0:25:0%:48:1E0:52:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:48:28:22:6:29 0/0:0:0:0:0:41:0%:78:1E0:48:41:27:14:41 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:33 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:34 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:38 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:20:0%:36:1E0:49:20:14:6:20 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:40 0/0:0:0:0:0:49:0%:93:1E0:44:49:29:20:51 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:37 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:46 0/0:0:0:0:0:53:0%:99:1E0:42:53:28:25:55 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:44 0/0:0:0:0:0:39:0%:74:1E0:48:39:20:19:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:41 0/0:0:0:0:0:56:0%:99:1E0:45:56:34:22:58 0/0:0:0:0:0:65:0%:99:1E0:44:65:39:26:65 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:51 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:42 0/0:0:0:0:0:53:0%:99:1E0:39:53:27:26:53 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:27:13:41 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:39 0/0:0:0:0:0:45:0%:85:1E0:43:45:29:16:46 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:46 0/0:0:0:0:0:35:0%:67:1E0:38:35:20:15:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:50:0%:92:1E0:41:50:31:19:50 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:53:0%:99:1E0:46:53:28:25:53 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:46 0/0:0:0:0:0:44:0%:81:1E0:43:44:27:17:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:34:0%:62:1E0:46:34:23:11:34 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:44 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:51 1/1:42:24:14:10:23:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:48:0%:89:1E0:46:48:29:19:49 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:49 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:44 MTB_anc 3415180 . ACACCTAGGGGGTGG A . PASS AC=166;AF=0.553;AN=300;ANN=A|intergenic_region|MODIFIER|nrdH_Rv3053c-Rv3054c_Rv3054c|gene3121-gene3122|intergenic_region|gene3121-gene3122|||n.3415181_3415194delCACCTAGGGGGTGG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:36:22:14:38:94.74%:99:1.1316E-19:35:2:1:1:38 1/1:43:9:5:4:10:90%:42:5.9538E-5:33:1:0:1:10 0/1:45:47:24:23:56:83.93%:99:8.1842E-23:49:9:3:6:56 0/1:47:19:11:8:24:79.17%:84:3.6826E-9:46:5:2:3:25 0/1:45:26:16:10:37:70.27%:99:1.294E-11:43:11:8:3:37 0/1:46:17:13:4:21:80.95%:76:2.3502E-8:43:4:1:3:21 0/1:48:40:27:13:47:85.11%:99:1.0894E-19:41:7:2:5:47 0/1:46:23:15:8:28:79.31%:99:5.3984E-11:41:6:2:4:29 0/1:49:20:11:9:28:71.43%:84:3.9563E-9:45:8:5:3:28 0/1:49:27:13:14:37:72.97%:99:2.9655E-12:50:10:5:5:37 0/1:48:31:15:16:35:86.11%:99:1.6935E-15:42:5:2:3:36 0/1:44:36:20:16:44:81.82%:99:2.867E-17:38:8:4:4:45 0/1:46:22:9:13:27:78.57%:97:1.7583E-10:52:6:4:2:29 0/1:43:25:11:14:31:78.12%:99:8.3928E-12:37:7:2:5:32 0/1:44:20:8:12:24:83.33%:91:6.3493E-10:47:4:1:3:24 0/1:45:26:9:17:33:74.29%:99:6.3192E-12:37:9:3:6:35 0/1:47:24:17:7:32:75%:99:4.1964E-11:48:8:7:1:32 1/1:47:10:5:5:11:90.91%:47:1.7011E-5:60:1:0:1:11 0/1:45:23:13:10:33:69.7%:95:2.6558E-10:45:10:5:5:33 0/1:50:24:11:13:29:82.76%:99:9.2544E-12:51:5:3:2:29 0/1:42:27:16:11:33:79.41%:99:7.9014E-13:40:7:6:1:34 0/1:46:41:21:20:47:87.23%:99:1.4122E-20:44:6:3:3:48 0/1:50:27:11:16:35:77.14%:99:1.2926E-12:45:8:5:3:35 0/1:46:33:19:14:39:84.62%:99:2.9926E-16:44:6:1:5:39 1/1:40:26:19:7:27:96.3%:99:1.4382E-14:60:1:1:0:27 0/1:47:14:7:7:17:82.35%:63:4.8851E-7:44:3:2:1:17 0/1:45:18:10:8:21:85.71%:84:3.7603E-9:37:3:1:2:22 0/1:50:21:10:11:23:87.5%:99:9.0704E-11:37:3:1:2:24 0/1:43:20:13:7:22:86.96%:95:3.1579E-10:45:3:1:2:23 0/1:40:30:15:15:36:81.08%:99:2.1946E-14:43:7:3:4:37 0/1:42:18:10:8:22:81.82%:81:7.1052E-9:42:4:0:4:23 1/1:40:17:11:6:18:94.44%:86:2.0936E-9:60:1:0:1:18 0/1:46:31:17:14:39:79.49%:99:1.1554E-14:42:8:5:3:39 0/1:39:24:20:4:30:80%:99:1.647E-11:55:6:2:4:30 0/1:45:31:20:11:35:88.57%:99:7.3316E-16:47:4:2:2:36 0/1:43:28:15:13:34:82.35%:99:1.349E-13:36:6:2:4:34 0/1:45:31:20:11:36:86.11%:99:1.6935E-15:37:5:2:3:37 0/1:45:43:28:15:51:82.69%:99:1.0955E-20:39:9:3:6:54 0/1:46:33:16:17:41:80.49%:99:1.0617E-15:42:8:6:2:42 0/1:45:37:21:16:46:80.43%:99:1.5478E-17:44:9:3:6:46 0/1:39:23:19:4:27:82.14%:99:3.103E-11:39:5:5:0:28 0/1:43:36:25:11:43:83.72%:99:1.5048E-17:40:7:4:3:43 0/1:46:21:10:11:24:84%:97:1.8789E-10:38:4:0:4:25 0/1:43:25:16:9:29:86.21%:99:1.3609E-12:35:4:2:2:29 0/1:43:16:8:8:18:88.89%:76:2.0936E-8:49:2:0:2:19 0/1:41:27:18:9:32:84.38%:99:2.3785E-13:41:5:2:3:32 0/1:46:21:9:12:27:77.78%:92:5.6888E-10:44:6:2:4:28 0/1:44:30:21:9:40:73.17%:99:1.422E-13:44:11:6:5:41 1/1:42:23:16:7:25:92%:99:2.7767E-12:35:2:1:1:25 0/1:45:36:24:12:44:81.82%:99:2.867E-17:37:8:4:4:44 0/1:48:15:10:5:19:78.95%:66:2.5053E-7:36:4:2:2:19 0/1:41:29:20:9:35:82.86%:99:4.008E-14:40:6:3:3:35 0/1:45:15:8:7:22:68.18%:61:7.4178E-7:35:7:4:3:22 0/1:45:32:21:11:39:82.05%:99:1.9666E-15:50:7:2:5:39 0/1:46:20:12:8:26:74.07%:85:2.7631E-9:40:7:5:2:28 0/1:43:32:21:11:36:86.49%:99:4.8717E-16:34:5:1:4:38 0/1:42:15:13:2:26:57.69%:57:1.7241E-6:41:11:7:4:27 0/1:40:23:15:8:31:71.88%:97:1.9117E-10:44:9:5:4:32 1/1:41:31:20:11:33:93.94%:99:8.2416E-17:32:2:1:1:33 0/1:46:37:26:11:45:82.22%:99:8.5365E-18:38:8:4:4:45 0/1:43:18:9:9:23:78.26%:79:1.1937E-8:46:5:1:4:23 0/1:44:20:12:8:27:74.07%:85:2.7631E-9:36:7:3:4:28 1/1:42:45:33:12:48:91.84%:99:1.1493E-23:47:4:1:3:49 0/1:50:23:14:9:28:82.14%:99:3.103E-11:40:5:2:3:28 0/1:41:26:13:13:33:78.79%:99:2.5824E-12:37:7:2:5:34 0/1:43:44:25:19:59:74.58%:99:7.4887E-20:40:15:8:7:59 0/1:42:33:22:11:42:78.57%:99:1.8121E-15:46:9:4:5:42 0/1:48:20:13:7:29:68.97%:82:5.4216E-9:46:9:2:7:29 0/1:44:7:5:2:11:63.64%:27:1.935E-3:53:4:3:1:11 0/1:47:16:10:6:25:64%:63:4.1493E-7:43:9:3:6:25 0/1:45:34:22:12:40:85%:99:8.7127E-17:39:6:1:5:40 0/1:46:32:22:10:37:84.21%:99:1.0241E-15:42:6:4:2:39 0/1:47:19:11:8:28:67.86%:77:1.6265E-8:40:9:6:3:28 0/1:45:27:16:11:33:81.82%:99:4.5192E-13:46:6:4:2:33 0/1:39:34:22:12:40:82.93%:99:1.7333E-16:43:7:4:3:41 1/1:47:21:12:9:22:95.45%:99:1.0931E-11:37:1:0:1:22 0/1:44:24:13:11:27:88.89%:99:2.0853E-12:43:3:2:1:27 0/1:47:26:14:12:32:81.25%:99:1.5064E-12:52:6:4:2:32 0/1:40:20:14:6:26:71.43%:84:3.9563E-9:38:8:2:6:28 0/1:45:22:12:10:28:75.86%:95:2.7763E-10:35:7:4:3:29 0/1:45:25:16:9:32:78.12%:99:8.3928E-12:39:7:2:5:32 0/1:41:28:16:12:36:77.78%:99:4.0051E-13:45:8:8:0:36 1/1:42:25:14:11:27:92.59%:99:2.0853E-13:49:2:0:2:27 0/1:51:15:8:7:20:75%:64:3.8543E-7:45:5:2:3:20 1/1:41:28:16:12:30:93.33%:99:4.194E-15:33:2:0:2:31 0/1:39:25:17:8:30:83.33%:99:2.745E-12:36:5:4:1:30 0/1:41:17:12:5:21:80.95%:76:2.3502E-8:36:4:2:2:21 0/1:46:24:18:6:30:80%:99:1.647E-11:43:6:3:3:30 0/1:49:25:15:10:34:73.53%:99:1.9819E-11:44:9:5:4:34 0/1:48:31:22:9:35:88.57%:99:7.3316E-16:34:4:2:2:35 0/1:45:25:12:13:34:73.53%:99:1.9819E-11:39:9:3:6:35 0/1:43:24:13:11:26:88.89%:99:2.0853E-12:43:3:1:2:27 0/1:40:37:21:16:43:86.05%:99:2.1068E-18:37:6:4:2:44 0/1:43:22:13:9:27:78.57%:97:1.7583E-10:40:6:4:2:28 0/1:43:31:19:12:35:88.57%:99:7.3316E-16:36:4:1:3:35 0/1:44:11:5:6:17:64.71%:43:4.3258E-5:37:6:4:2:17 0/1:46:26:15:11:30:86.67%:99:3.9214E-13:36:4:1:3:30 0/1:41:23:14:9:31:74.19%:98:1.3219E-10:42:8:7:1:32 0/1:42:25:14:11:33:75.76%:99:1.3235E-11:35:8:4:4:33 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 0/1:41:19:9:10:23:76%:82:5.8245E-9:41:6:3:3:25 0/1:43:24:14:10:28:85.71%:99:4.7015E-12:43:4:3:1:28 0/1:41:25:17:8:29:83.33%:99:2.745E-12:33:5:1:4:30 0/1:41:23:13:10:28:82.14%:99:3.103E-11:47:5:4:1:28 1/1:46:17:14:3:18:94.44%:86:2.0936E-9:39:1:0:1:18 0/1:44:28:17:11:35:80%:99:2.4048E-13:37:7:1:6:35 0/1:43:19:13:6:27:70.37%:79:1.2089E-8:45:8:5:3:27 0/1:43:27:17:10:35:77.14%:99:1.2926E-12:39:8:3:5:35 1/1:41:45:30:15:49:90%:99:3.448E-23:41:5:3:2:50 0/1:43:28:17:11:32:87.5%:99:3.2142E-14:37:4:1:3:32 0/1:42:25:16:9:32:78.12%:99:8.3928E-12:40:7:2:5:32 0/1:36:24:13:11:25:88.89%:99:2.0853E-12:49:3:3:0:27 0/1:41:20:13:7:27:74.07%:85:2.7631E-9:39:7:4:3:27 0/1:41:30:20:10:36:83.33%:99:1.1855E-14:39:6:4:2:36 0/1:38:38:23:15:42:86.36%:99:6.0539E-19:37:6:2:4:44 0/1:40:41:24:17:46:89.13%:99:5.7183E-21:36:5:4:1:47 0/1:39:26:11:15:34:74.29%:99:6.3192E-12:35:9:5:4:36 0/1:45:32:18:14:38:84.21%:99:1.0241E-15:40:6:3:3:38 0/1:39:30:19:11:36:83.33%:99:1.1855E-14:36:6:4:2:38 1/1:41:47:28:19:51:92.16%:99:8.5347E-25:33:4:3:1:51 0/1:40:48:31:17:59:81.36%:99:8.884E-23:38:11:5:6:59 0/1:44:22:13:9:27:81.48%:99:1.0343E-10:37:5:2:3:27 0/1:42:27:15:12:33:81.82%:99:4.5192E-13:38:6:2:4:33 0/1:41:44:21:23:47:89.8%:99:1.2413E-22:36:5:3:2:49 0/1:39:23:16:7:30:74.19%:98:1.3219E-10:39:8:6:2:32 0/1:42:25:14:11:31:80.65%:99:4.9949E-12:36:6:3:3:31 0/1:39:28:17:11:37:71.79%:99:1.3724E-12:36:11:7:4:40 0/1:38:33:21:12:34:89.19%:99:5.7997E-17:36:4:0:4:38 0/1:39:25:11:14:29:86.21%:99:1.3609E-12:43:4:4:0:29 0/1:42:25:12:13:31:80.65%:99:4.9949E-12:37:6:4:2:32 0/1:38:33:20:13:36:86.84%:99:1.3966E-16:37:5:2:3:38 0/1:40:39:25:14:44:84.78%:99:3.7523E-19:36:7:3:4:46 0/1:42:25:14:11:33:73.53%:99:1.9819E-11:36:9:6:3:34 0/1:39:32:20:12:40:78.05%:99:5.8981E-15:39:9:4:5:41 0/1:40:20:10:10:26:76.92%:87:1.8273E-9:32:6:4:2:26 0/1:45:36:25:11:41:87.8%:99:3.2269E-18:35:5:1:4:41 0/1:40:44:27:17:55:80%:99:1.0901E-20:40:11:8:3:55 0/1:42:18:11:7:23:75%:77:1.8413E-8:48:6:2:4:24 0/1:43:33:24:9:41:78.57%:99:1.8121E-15:37:9:3:6:42 0/1:40:37:30:7:50:74%:99:1.0376E-16:42:13:7:6:50 0/1:43:34:21:13:43:79.07%:99:5.5428E-16:38:9:7:2:43 0/1:45:25:13:12:32:78.12%:99:8.3928E-12:40:7:4:3:32 0/1:39:40:31:9:45:86.96%:99:4.9559E-20:36:6:2:4:46 1/1:44:37:28:9:40:92.5%:99:1.1479E-19:35:3:1:2:40 0/1:46:31:13:18:40:77.5%:99:1.911E-14:39:9:6:3:40 0/1:51:17:9:8:20:85%:78:1.2848E-8:36:3:2:1:20 0/1:40:25:15:10:32:78.12%:99:8.3928E-12:36:7:2:5:32 0/1:45:40:29:11:46:86.96%:99:4.9559E-20:36:6:3:3:47 0/1:42:31:17:14:41:73.81%:99:4.5401E-14:44:11:7:4:42 0/1:43:33:19:14:37:89.19%:99:5.7997E-17:36:4:2:2:38 MTB_anc 3415332 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|nrdH_Rv3053c-Rv3054c_Rv3054c|gene3121-gene3122|intergenic_region|gene3121-gene3122|||n.3415332G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:42:31:11:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:43:38:5:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:39:30:9:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:39:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:49:33:16:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:44:36:8:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:38:32:6:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:46:36:10:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:48:34:14:48:100%:99:1.554E-28:0:0:0:0:49 1/1:37:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:41:32:9:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:45:34:11:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:44:34:10:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:36:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:39:34:5:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:46:36:10:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:37:38:32:6:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 3416043 . C T . PASS AC=68;AF=0.227;AN=300;ANN=T|intergenic_region|MODIFIER|Rv3054c_Rv3054c-Rv3055_Rv3055|gene3122-gene3123|intergenic_region|gene3122-gene3123|||n.3416043C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:68:0%:99:1E0:42:68:27:41:68 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:20 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 0/0:0:0:0:0:35:0%:67:1E0:46:35:10:25:35 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:29 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:33:0%:63:1E0:51:33:19:14:33 0/0:0:0:0:0:40:0%:74:1E0:47:40:15:25:41 0/0:0:0:0:0:31:0%:59:1E0:50:31:16:15:31 0/0:0:0:0:0:56:0%:99:1E0:41:56:19:37:56 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:55:0%:99:1E0:42:55:24:31:56 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:50:0%:92:1E0:44:50:16:34:50 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:39 0/0:0:0:0:0:65:0%:99:1E0:44:65:28:37:65 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:37 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:45 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:60:0%:99:1E0:41:60:36:24:60 0/0:0:0:0:0:53:0%:99:1E0:41:53:28:25:55 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:17 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:39 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:44 0/0:0:0:0:0:40:0%:74:1E0:39:40:19:21:41 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:48 0/0:0:0:0:0:43:0%:82:1E0:49:43:21:22:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:38 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:50 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:58:0%:99:1E0:43:58:29:29:60 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:50:0%:92:1E0:44:50:29:21:50 0/0:60:1:0:1:25:4%:38:5E-1:44:24:12:12:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:35:0%:67:1E0:47:35:13:22:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:53:0%:99:1E0:40:53:24:29:53 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:46:38:14:24:38 0/0:0:0:0:0:58:0%:99:1E0:42:58:26:32:59 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:45 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:34 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:40:22:18:41:97.56%:99:9.8874E-23:26:1:0:1:45 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:36 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:50:0%:92:1E0:39:50:19:31:51 0/0:37:2:0:2:38:5.26%:50:2.4667E-1:45:36:20:16:38 0/0:0:0:0:0:51:0%:97:1E0:45:51:19:32:52 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 1/1:41:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:44:0%:81:1E0:42:44:15:29:44 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:40:34:11:23:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:42 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:47:0%:89:1E0:42:47:17:30:47 0/0:0:0:0:0:53:0%:99:1E0:40:53:26:27:54 0/0:0:0:0:0:30:0%:55:1E0:43:30:9:21:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:47 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 0/0:0:0:0:0:57:0%:99:1E0:38:57:31:26:58 1/1:41:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:53 0/0:0:0:0:0:36:0%:66:1E0:38:36:15:21:38 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:47 1/1:37:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:39 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:51 0/0:37:1:0:1:40:2.5%:62:5E-1:44:39:17:22:40 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:46 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:42:0%:77:1E0:46:42:25:17:42 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:29 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:51:0%:97:1E0:42:51:33:18:53 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:38:1:1:0:50:2%:80:5E-1:41:49:24:25:50 0/0:0:0:0:0:44:0%:81:1E0:43:44:27:17:44 MTB_anc 3420825 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|cyp136_Rv3059|gene3127|transcript|Transcript_gene3127|Coding|1/1|c.1334G>A|p.Gly445Asp|1334/1479|1334/1479|445/492||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3420825G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3420825G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:70:37:33:70:100%:99:1.0659E-41:0:0:0:0:75 1/1:49:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:84:44:40:84:100%:99:4.3483E-50:0:0:0:0:85 1/1:45:59:29:30:60:98.33%:99:6.3137E-34:32:1:1:0:61 1/1:47:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:47:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:47:61:31:30:61:100%:99:2.609E-36:0:0:0:0:62 1/1:47:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:70:37:33:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:47:60:28:32:60:100%:99:1.035E-35:0:0:0:0:61 1/1:47:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:83:48:35:83:100%:99:1.729E-49:0:0:0:0:86 1/1:55:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:82:49:33:83:98.8%:99:1.4523E-47:38:1:0:1:86 1/1:45:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:73:36:37:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:56 1/1:47:45:24:21:46:97.83%:99:1.1441E-25:38:1:1:0:49 1/1:48:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:45:103:52:51:103:100%:99:1.7512E-61:0:0:0:0:104 1/1:48:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:79:32:47:79:100%:99:4.3185E-47:0:0:0:0:80 1/1:43:60:36:24:60:100%:99:1.035E-35:0:0:0:0:62 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:66:31:35:66:100%:99:2.6498E-39:0:0:0:0:70 1/1:45:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:65:35:30:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:42:72:39:33:72:100%:99:6.7558E-43:0:0:0:0:75 1/1:44:60:25:35:60:100%:99:1.035E-35:0:0:0:0:60 1/1:50:71:34:37:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:42:66:38:28:66:100%:99:2.6498E-39:0:0:0:0:69 1/1:49:61:34:27:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:67:29:38:67:100%:99:6.6743E-40:0:0:0:0:70 1/1:45:75:34:41:75:100%:99:1.0773E-44:0:0:0:0:78 1/1:47:114:51:63:114:100%:99:4.392E-68:0:0:0:0:115 1/1:47:91:45:46:91:100%:99:2.7621E-54:0:0:0:0:91 1/1:46:96:53:43:96:100%:99:2.7702E-57:0:0:0:0:101 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:65:28:37:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:47:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:73:35:38:73:100%:99:1.7006E-43:0:0:0:0:75 1/1:46:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:75:41:34:75:100%:99:1.0773E-44:0:0:0:0:77 1/1:45:77:37:40:77:100%:99:6.8219E-46:0:0:0:0:79 1/1:47:78:34:44:78:100%:99:1.7165E-46:0:0:0:0:79 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:74:40:34:74:100%:99:4.2804E-44:0:0:0:0:77 1/1:48:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:87:43:44:87:100%:99:6.9142E-52:0:0:0:0:88 1/1:45:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:46:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:72:36:36:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:46:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:44:70:31:39:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:46:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:69:37:32:69:100%:99:4.233E-41:0:0:0:0:72 1/1:46:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:77:35:42:77:100%:99:6.8219E-46:0:0:0:0:77 1/1:48:109:53:56:109:100%:99:4.3979E-65:0:0:0:0:111 1/1:47:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:62:34:28:63:98.41%:99:1.0605E-35:39:1:0:1:64 1/1:50:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:70:49:21:70:100%:99:1.0659E-41:0:0:0:0:73 1/1:50:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:53:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:48:68:33:35:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:43:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:63:32:31:63:100%:99:1.657E-37:0:0:0:0:65 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:53 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:66:33:33:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:45:98:49:49:98:100%:99:1.7493E-58:0:0:0:0:101 1/1:44:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:59:31:28:60:98.33%:99:6.3137E-34:38:1:1:0:60 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:60:37:23:60:100%:99:1.035E-35:0:0:0:0:60 1/1:49:48:32:16:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:66:36:30:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:66:37:29:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:47:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:83:43:40:83:100%:99:1.729E-49:0:0:0:0:83 1/1:44:68:34:34:68:100%:99:1.6809E-40:0:0:0:0:72 1/1:46:80:41:39:80:100%:99:1.0864E-47:0:0:0:0:81 1/1:45:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:60:33:27:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:65:35:30:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:43:65:35:30:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:43:71:33:38:71:100%:99:2.6835E-42:0:0:0:0:72 1/1:46:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:75:35:40:75:100%:99:1.0773E-44:0:0:0:0:77 1/1:42:84:37:47:84:100%:99:4.3483E-50:0:0:0:0:85 1/1:44:68:24:44:68:100%:99:1.6809E-40:0:0:0:0:74 1/1:49:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:48:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:70:28:42:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:43:74:39:35:74:100%:99:4.2804E-44:0:0:0:0:75 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:81:40:41:81:100%:99:2.7329E-48:0:0:0:0:83 1/1:43:49:29:20:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:75:41:34:75:100%:99:1.0773E-44:0:0:0:0:76 1/1:41:74:39:35:74:100%:99:4.2804E-44:0:0:0:0:78 1/1:40:80:43:37:80:100%:99:1.0864E-47:0:0:0:0:88 1/1:41:79:40:39:79:100%:99:4.3185E-47:0:0:0:0:81 1/1:43:67:32:35:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:42:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:40:101:63:38:101:100%:99:2.7747E-60:0:0:0:0:102 1/1:43:90:46:44:90:100%:99:1.0988E-53:0:0:0:0:91 1/1:41:55:34:21:56:98.21%:99:1.4593E-31:39:1:1:0:57 1/1:41:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:95:52:43:95:100%:99:1.1023E-56:0:0:0:0:97 1/1:41:69:26:43:69:100%:99:4.233E-41:0:0:0:0:71 1/1:43:103:50:53:103:100%:99:1.7512E-61:0:0:0:0:104 1/1:39:80:48:32:80:100%:99:1.0864E-47:0:0:0:0:88 1/1:40:89:50:39:89:100%:99:4.3706E-53:0:0:0:0:94 1/1:41:72:37:35:72:100%:99:6.7558E-43:0:0:0:0:76 1/1:40:74:36:38:74:100%:99:4.2804E-44:0:0:0:0:76 1/1:41:88:49:39:88:100%:99:1.7384E-52:0:0:0:0:91 1/1:39:70:36:34:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:40:71:34:37:71:100%:99:2.6835E-42:0:0:0:0:77 1/1:38:66:39:27:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:43:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:71 1/1:43:70:35:35:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:40:108:54:54:108:100%:99:1.7511E-64:0:0:0:0:110 1/1:43:65:34:31:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:41:77:38:39:77:100%:99:6.8219E-46:0:0:0:0:78 1/1:42:90:45:45:90:100%:99:1.0988E-53:0:0:0:0:92 1/1:43:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:68:35:33:68:100%:99:1.6809E-40:0:0:0:0:71 1/1:42:77:36:41:77:100%:99:6.8219E-46:0:0:0:0:77 1/1:41:71:36:35:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:46:60:35:25:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:61:40:21:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:86:50:36:86:100%:99:2.7498E-51:0:0:0:0:86 1/1:44:87:52:35:87:100%:99:6.9142E-52:0:0:0:0:88 1/1:43:72:37:35:72:100%:99:6.7558E-43:0:0:0:0:73 MTB_anc 3428374 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|cstA_Rv3063|gene3131|transcript|Transcript_gene3131|Coding|1/1|c.1132C>G|p.His378Asp|1132/2277|1132/2277|378/758||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3428374C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3428374C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:63:30:33:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:41:20:21:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:53:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:52:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:48:29:16:13:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:44:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:70:30:40:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:41:60:25:35:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 MTB_anc 3428716 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|cstA_Rv3063|gene3131|transcript|Transcript_gene3131|Coding|1/1|c.1474C>T|p.Leu492Leu|1474/2277|1474/2277|492/758||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3428716C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3428716C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:41 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:20 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:40 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:29 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:23 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:23 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:25 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:45:0%:85:1E0:41:45:17:28:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:38 0/0:0:0:0:0:23:0%:44:1E0:38:23:7:16:26 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:35 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:39:20:4:16:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:30 0/0:0:0:0:0:45:0%:85:1E0:38:45:22:23:46 0/0:0:0:0:0:24:0%:44:1E0:39:24:7:17:24 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/0:0:0:0:0:16:0%:29:1E0:42:16:10:6:17 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:20 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:39:27:18:9:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:29:0%:55:1E0:39:29:8:21:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:40 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:49:0%:93:1E0:39:49:27:22:50 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:26 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:24 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:34 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:50 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:44:0%:81:1E0:40:44:16:28:46 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:41 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:6:15:21 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:44 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:32 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:19 0/0:0:0:0:0:41:0%:78:1E0:39:41:16:25:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:38 0/0:39:1:0:1:22:4.55%:31:5E-1:38:21:12:9:22 0/0:0:0:0:0:50:0%:92:1E0:40:50:23:27:50 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:39:33:11:22:34 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:38:42:21:21:45 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:39:1:0:1:25:4%:38:5E-1:39:24:10:14:27 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:46 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:32 0/0:0:0:0:0:13:0%:25:1E0:43:13:7:6:13 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:25 0/0:0:0:0:0:28:0%:51:1E0:38:28:5:23:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:37 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:36 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:60:1:1:0:28:3.57%:41:5E-1:45:27:15:12:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:34 0/0:0:0:0:0:51:0%:97:1E0:41:51:17:34:55 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:25 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:7:29:38 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:40 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:15 0/0:0:0:0:0:25:0%:48:1E0:41:25:7:18:27 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:21 0/0:60:1:0:1:35:2.86%:55:5E-1:39:34:18:16:36 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:37:0%:70:1E0:37:37:9:28:38 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:27 0/0:0:0:0:0:47:0%:89:1E0:41:47:19:28:48 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:27 0/0:0:0:0:0:19:0%:37:1E0:40:19:4:15:20 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:30 1/1:35:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:13 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:37:0%:70:1E0:37:37:19:18:37 0/0:38:1:0:1:39:2.56%:62:5E-1:42:38:15:23:40 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:38 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:20 0/0:0:0:0:0:30:0%:55:1E0:36:30:6:24:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:35:0%:67:1E0:38:35:14:21:37 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:25 0/0:0:0:0:0:25:0%:48:1E0:36:25:7:18:25 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:30 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:23 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:42 0/0:0:0:0:0:44:0%:81:1E0:41:44:17:27:45 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:26 0/0:0:0:0:0:26:0%:47:1E0:37:26:11:15:27 0/0:0:0:0:0:34:0%:62:1E0:37:34:10:24:37 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:30 0/0:0:0:0:0:34:0%:62:1E0:38:34:8:26:37 0/0:0:0:0:0:28:0%:51:1E0:36:28:7:21:31 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:31 0/0:0:0:0:0:33:0%:63:1E0:37:33:10:23:34 0/0:0:0:0:0:23:0%:44:1E0:36:23:7:16:25 0/0:0:0:0:0:34:0%:62:1E0:37:34:11:23:36 0/0:0:0:0:0:36:0%:66:1E0:37:36:12:24:39 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:31 0/0:0:0:0:0:30:0%:55:1E0:38:30:4:26:30 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:24 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:25 0/0:0:0:0:0:42:0%:77:1E0:38:42:12:30:42 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:27 0/0:0:0:0:0:35:0%:67:1E0:38:35:12:23:35 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:18 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:16:0%:29:1E0:41:16:5:11:16 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:37:0%:70:1E0:38:37:12:25:38 0/0:0:0:0:0:22:0%:40:1E0:37:22:7:15:23 MTB_anc 3429837 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv3064c_Rv3064c|gene3132|transcript|Transcript_gene3132|Coding|1/1|c.414T>G|p.Thr138Thr|414/426|414/426|138/141||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3429837A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3429837A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:25:10:15:26:96.15%:99:5.4444E-14:38:1:0:1:26 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:33:13:20:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:30:10:20:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:40:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:13:9:4:14:92.86%:64:3.7391E-7:33:1:1:0:15 1/1:42:36:8:28:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:39:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:32:16:16:34:94.12%:99:2.2142E-17:37:2:1:1:34 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 3430937 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|synonymous_variant|LOW|Rv3066_Rv3066|gene3134|transcript|Transcript_gene3134|Coding|1/1|c.231G>A|p.Leu77Leu|231/609|231/609|77/202||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3430937G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3430937G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:48:15:33:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:43:0%:82:1E0:44:43:16:27:44 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:31 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:25:0%:48:1E0:41:25:7:18:26 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:21:0%:40:1E0:42:21:6:15:21 1/1:46:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 1/1:48:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:61:24:37:61:100%:99:2.609E-36:0:0:0:0:63 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:42 1/1:45:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:11:21:32 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:28 1/1:44:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:45 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 0/0:0:0:0:0:34:0%:62:1E0:39:34:11:23:35 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 1/1:42:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:11:24:35 0/0:0:0:0:0:56:0%:99:1E0:44:56:27:29:58 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:32 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:28:0%:51:1E0:52:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:10:19:29 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:36 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:21:18:41:95.12%:99:3.8137E-22:31:1:0:1:41 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:47 1/1:46:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:39 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:42 1/1:43:26:14:12:27:96.3%:99:1.4382E-14:60:1:1:0:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:37 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:60:1:1:0:44:2.27%:69:5E-1:41:43:15:28:46 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:25 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:43 0/0:0:0:0:0:35:0%:67:1E0:40:35:11:24:39 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:28 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:44 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:46 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:40 0/0:0:0:0:0:32:0%:59:1E0:39:32:11:21:32 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:34 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:22 0/0:0:0:0:0:46:0%:85:1E0:41:46:16:30:47 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:46 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:30 0/0:0:0:0:0:56:0%:99:1E0:38:56:25:31:58 0/0:0:0:0:0:37:0%:70:1E0:41:37:12:25:39 0/0:35:1:1:0:37:2.7%:59:5E-1:42:36:16:20:39 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:35 0/0:0:0:0:0:39:0%:74:1E0:37:39:13:26:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:38 0/0:0:0:0:0:31:0%:59:1E0:39:31:11:20:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:12:28:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:29 0/0:0:0:0:0:29:0%:55:1E0:39:29:6:23:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 1/1:38:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:44:0%:81:1E0:40:44:16:28:44 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:43 0/0:0:0:0:0:22:0%:40:1E0:41:22:8:14:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:37 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:47 1/1:41:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 3434533 . A AG . PASS AC=1;AF=3.425e-03;AN=292;ANN=AG|frameshift_variant|HIGH|Rv3071_Rv3071|gene3140|transcript|Transcript_gene3140|Coding|1/1|c.72dupG|p.Phe25fs|73/1110|73/1110|25/369||INFO_REALIGN_3_PRIME,AG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3434533_3434534insG||||||,AG|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3434533_3434534insG||||||;HOM=0;LOF=(Rv3071_Rv3071|gene3140|1|1.00);set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:27:2:2:0:20:10%:21:2.4359E-1:37:18:6:12:35 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:17 0/0:0:0:0:0:23:0%:44:1E0:38:23:6:17:37 0/0:32:1:1:0:18:5.56%:24:5E-1:36:17:11:6:20 0/0:0:0:0:0:10:0%:17:1E0:44:10:5:5:15 0/0:30:2:2:0:15:13.33%:16:2.4138E-1:40:13:7:6:21 0/0:32:1:1:0:16:6.25%:21:5E-1:35:15:7:8:25 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:15 0/0:30:1:1:0:21:4.76%:31:5E-1:40:20:5:15:28 0/0:30:1:1:0:16:6.25%:21:5E-1:37:15:8:7:19 0/0:24:1:1:0:14:7.14%:17:5E-1:37:13:4:9:21 0/0:30:1:1:0:16:6.25%:21:5E-1:36:15:4:11:21 0/0:0:0:0:0:9:0%:18:1E0:39:9:1:8:9 0/0:24:1:1:0:26:3.85%:38:5E-1:38:25:7:18:37 0/0:0:0:0:0:17:0%:33:1E0:36:17:4:13:22 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:15 0/0:37:1:1:0:10:10%:11:5E-1:38:9:3:6:17 0/0:30:1:1:0:13:7.69%:18:5E-1:40:12:6:6:16 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:18 0/0:0:0:0:0:14:0%:25:1E0:38:14:3:11:22 0/0:26:1:1:0:12:8.33%:14:5E-1:36:11:3:8:14 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:31 0/0:0:0:0:0:11:0%:22:1E0:40:11:5:6:15 0/0:31:1:1:0:15:6.67%:21:5E-1:40:14:5:9:24 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:22 0/0:0:0:0:0:14:0%:25:1E0:38:14:1:13:19 0/0:30:3:3:0:12:25%:6:1.087E-1:37:9:4:5:15 0/0:0:0:0:0:13:0%:25:1E0:39:13:7:6:15 0/0:32:1:1:0:13:7.69%:18:5E-1:39:12:6:6:18 0/0:34:1:1:0:11:9.09%:14:5E-1:37:10:5:5:17 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:16 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:25 0/0:30:1:1:0:14:7.14%:17:5E-1:37:13:3:10:24 0/0:26:1:1:0:10:10%:11:5E-1:35:9:1:8:15 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:32 0/0:0:0:0:0:12:0%:21:1E0:38:12:7:5:15 0/0:26:2:2:0:29:6.9%:37:2.4561E-1:36:27:20:7:43 0/0:30:2:2:0:14:14.29%:12:2.4074E-1:37:12:5:7:22 0/0:0:0:0:0:17:0%:33:1E0:37:17:12:5:29 0/0:30:1:1:0:15:6.67%:21:5E-1:36:14:4:10:22 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:25 0/0:26:1:1:0:11:9.09%:14:5E-1:37:10:3:7:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:18 0/0:30:1:1:0:22:4.55%:31:5E-1:38:21:8:13:31 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:13 0/0:0:0:0:0:11:0%:22:1E0:38:11:6:5:21 0/0:30:1:1:0:16:6.25%:21:5E-1:37:15:6:9:23 0/0:0:0:0:0:13:0%:25:1E0:39:13:4:9:22 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:13 0/0:31:1:1:0:21:4.76%:31:5E-1:37:20:8:12:30 0/0:30:1:1:0:10:10%:11:5E-1:35:9:2:7:11 0/0:0:0:0:0:11:0%:22:1E0:39:11:4:7:21 0/0:0:0:0:0:14:0%:25:1E0:37:14:4:10:18 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:27 0/0:26:1:1:0:22:4.55%:31:5E-1:37:21:8:13:30 0/0:0:0:0:0:12:0%:21:1E0:35:12:3:9:16 0/0:0:0:0:0:15:0%:29:1E0:37:15:10:5:24 0/0:29:3:3:0:18:16.67%:14:1.1429E-1:36:15:5:10:27 0/0:28:2:2:0:20:10%:21:2.4359E-1:38:18:7:11:27 0/0:24:1:1:0:13:7.69%:18:5E-1:38:12:2:10:15 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:24 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:25 0/0:26:1:1:0:20:5%:27:5E-1:37:19:10:9:33 0/0:27:4:4:0:42:9.52%:43:5.801E-2:37:38:16:22:54 0/0:29:1:1:0:17:5.88%:24:5E-1:38:16:2:14:21 0/0:30:1:1:0:12:8.33%:14:5E-1:37:11:5:6:17 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:17 0/0:0:0:0:0:13:0%:25:1E0:39:13:7:6:17 0/0:0:0:0:0:16:0%:29:1E0:35:16:9:7:20 0/0:0:0:0:0:16:0%:29:1E0:39:16:8:8:20 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:21 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:24 0/0:0:0:0:0:14:0%:25:1E0:36:14:2:12:29 0/0:0:0:0:0:11:0%:22:1E0:40:11:4:7:16 0/0:24:1:1:0:13:7.69%:18:5E-1:37:12:3:9:21 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:20 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:13 0/0:0:0:0:0:12:0%:21:1E0:38:12:1:11:14 0/0:31:2:2:0:16:12.5%:15:2.4194E-1:35:14:7:7:21 0/0:24:1:1:0:11:9.09%:14:5E-1:38:10:4:6:20 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:15 0/0:28:1:1:0:13:7.69%:18:5E-1:38:12:6:6:20 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:12 0/0:29:2:2:0:8:12.5%:7:2.3684E-1:35:8:4:4:16 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:21 0/0:28:2:2:0:13:15.38%:13:2.4E-1:36:11:7:4:17 0/0:28:2:2:0:11:18.18%:10:2.381E-1:38:9:4:5:13 0/0:30:2:2:0:15:13.33%:16:2.4138E-1:37:13:7:6:20 0/0:28:2:2:0:22:9.09%:24:2.4419E-1:37:20:7:13:28 0/0:28:2:2:0:18:11.11%:18:2.4286E-1:36:16:5:11:22 0/1:20:7:7:0:22:23.33%:23:4.8126E-3:34:18:9:9:31 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:21 0/0:28:2:2:0:22:9.09%:24:2.4419E-1:39:20:7:13:30 0/0:26:1:1:0:11:9.09%:14:5E-1:35:10:5:5:14 0/0:34:1:1:0:15:6.67%:21:5E-1:38:14:6:8:19 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:17 0/0:26:2:2:0:23:8.7%:28:2.4444E-1:37:21:6:15:31 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:17 0/0:0:0:0:0:13:0%:25:1E0:40:13:2:11:21 0/0:32:1:1:0:16:6.25%:21:5E-1:36:15:6:9:23 0/0:29:2:2:0:21:9.52%:25:2.439E-1:37:19:4:15:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:10 0/0:25:2:2:0:20:10%:21:2.4359E-1:37:18:8:10:21 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:25 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:25 0/0:28:1:1:0:16:6.25%:21:5E-1:37:15:7:8:24 0/0:27:3:3:0:17:17.65%:14:1.1364E-1:39:14:4:10:23 0/0:0:0:0:0:17:0%:33:1E0:36:17:6:11:27 0/0:30:1:1:0:10:10%:11:5E-1:36:9:1:8:18 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:10 0/0:30:1:1:0:21:4.76%:31:5E-1:36:20:8:12:33 0/0:31:1:1:0:18:5.56%:24:5E-1:36:17:10:7:22 0/0:30:1:1:0:18:5.56%:24:5E-1:37:17:7:10:24 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:21 0/0:26:1:1:0:25:4%:38:5E-1:34:24:7:17:33 0/0:0:0:0:0:13:0%:25:1E0:38:13:3:10:16 0/0:32:1:1:0:23:4.35%:34:5E-1:35:22:10:12:44 0/0:26:1:1:0:16:6.25%:21:5E-1:37:15:5:10:27 0/0:26:1:1:0:18:5.56%:24:5E-1:37:17:9:8:21 0/0:26:1:1:0:8:12.5%:8:5E-1:36:7:2:5:12 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:32 0/0:24:1:1:0:19:5.26%:28:5E-1:37:18:4:14:28 0/0:29:2:2:0:22:9.09%:24:2.4419E-1:37:20:5:15:30 0/0:30:1:1:0:17:5.88%:24:5E-1:38:16:2:14:22 0/0:26:1:1:0:18:5.56%:24:5E-1:36:17:7:10:28 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:29 0/0:0:0:0:0:14:0%:25:1E0:39:14:4:10:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:37:16:2:14:21 0/0:32:1:1:0:12:8.33%:14:5E-1:37:11:4:7:16 0/0:37:4:4:0:14:23.53%:8:5.0612E-2:37:12:6:6:19 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:18 0/0:27:4:4:0:15:26.67%:8:4.9808E-2:38:11:4:7:21 0/0:33:2:2:0:30:6.67%:37:2.4576E-1:38:28:5:23:36 0/0:31:4:4:0:25:13.79%:20:5.5222E-2:41:22:4:18:28 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:19 0/0:26:1:1:0:13:7.69%:18:5E-1:37:12:4:8:17 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:26:1:1:0:10:10%:11:5E-1:39:9:4:5:17 0/0:28:3:3:0:18:16.67%:14:1.1429E-1:36:15:4:11:24 0/0:31:2:2:0:14:14.29%:12:2.4074E-1:38:12:6:6:22 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:9 0/0:32:1:1:0:13:7.69%:18:5E-1:37:12:4:8:24 0/0:34:1:1:0:18:5.56%:24:5E-1:36:17:6:11:24 0/0:26:3:3:0:18:16.67%:14:1.1429E-1:38:15:3:12:23 0/0:28:2:2:0:15:13.33%:16:2.4138E-1:37:13:2:11:19 MTB_anc 3440542 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|atsF_Rv3077|gene3146|transcript|Transcript_gene3146|Coding|1/1|c.1002G>A|p.Gly334Gly|1002/1812|1002/1812|334/603||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3440542G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3440542G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:49:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:55:20:35:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:52:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:25:14:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:64:28:36:64:100%:99:4.1752E-38:0:0:0:0:69 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:53 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:38:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 MTB_anc 3440895 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|atsF_Rv3077|gene3146|transcript|Transcript_gene3146|Coding|1/1|c.1355G>A|p.Arg452His|1355/1812|1355/1812|452/603||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3440895G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3440895G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:53:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:45:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:61:28:33:61:100%:99:2.609E-36:0:0:0:0:63 1/1:50:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:49:31:18:50:98%:99:5.0549E-28:36:1:0:1:51 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:55:36:19:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:42:75:38:37:76:98.68%:99:2.0875E-43:33:1:0:1:76 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:57 1/1:38:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:37:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:62:36:26:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:47:33:14:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 3443254 . T A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|pknK_Rv3080c|gene3149|transcript|Transcript_gene3149|Coding|1/1|c.2735A>T|p.Glu912Val|2735/3333|2735/3333|912/1110||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3443254T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3443254T>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:51 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:52:0%:96:1E0:45:52:27:25:52 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:28 0/0:0:0:0:0:25:0%:48:1E0:50:25:9:16:25 0/0:0:0:0:0:41:0%:78:1E0:49:41:16:25:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:21:8:29 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:26:0%:47:1E0:50:26:16:10:26 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:48 0/0:0:0:0:0:12:0%:21:1E0:44:12:8:4:13 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:53 0/0:0:0:0:0:39:0%:74:1E0:44:39:24:15:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:24 0/0:0:0:0:0:53:0%:99:1E0:42:53:29:24:54 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:35 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:44 0/0:60:1:0:1:40:2.5%:62:5E-1:44:39:17:22:41 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:29 0/0:0:0:0:0:35:0%:67:1E0:49:35:22:13:36 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:53:0%:99:1E0:43:53:33:20:54 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:47 0/0:0:0:0:0:54:0%:99:1E0:44:54:24:30:54 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:28 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:17 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:37 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:0:0:0:0:18:0%:32:1E0:47:18:13:5:19 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:42 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:47 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:49:0%:93:1E0:46:49:25:24:50 0/0:0:0:0:0:54:0%:99:1E0:42:54:28:26:54 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:60:0%:99:1E0:44:60:27:33:60 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:24 0/0:0:0:0:0:25:0%:48:1E0:48:25:9:16:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:36:0%:66:1E0:49:36:12:24:37 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:39:0%:74:1E0:50:39:19:20:40 0/0:0:0:0:0:53:0%:99:1E0:41:53:37:16:53 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:60:0%:99:1E0:41:60:35:25:60 0/0:0:0:0:0:33:0%:63:1E0:45:33:23:10:34 0/0:0:0:0:0:29:0%:55:1E0:49:29:21:8:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:40 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 0/0:0:0:0:0:45:0%:85:1E0:47:45:23:22:45 0/0:0:0:0:0:21:0%:40:1E0:49:21:15:6:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:50:32:22:10:33 0/0:0:0:0:0:46:0%:85:1E0:38:46:18:28:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:42:0%:77:1E0:39:42:13:29:43 0/0:0:0:0:0:21:0%:40:1E0:44:21:5:16:21 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:35 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:45 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:20 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:32 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:16:0%:29:1E0:42:16:9:7:16 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:24 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:33 0/0:0:0:0:0:51:0%:97:1E0:37:51:34:17:51 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:5:18:23 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:48 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:57:0%:99:1E0:37:57:28:29:59 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:38 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:30 0/0:0:0:0:0:43:0%:82:1E0:37:43:24:19:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:42 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:34 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:56:0%:99:1E0:39:56:30:26:57 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:44 0/0:0:0:0:0:17:0%:33:1E0:42:17:13:4:17 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:39 0/0:0:0:0:0:55:0%:99:1E0:42:55:19:36:56 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 MTB_anc 3443255 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|stop_gained|HIGH|pknK_Rv3080c|gene3149|transcript|Transcript_gene3149|Coding|1/1|c.2734G>T|p.Glu912*|2734/3333|2734/3333|912/1110||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3443255C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3443255C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:51 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:53 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:20:8:28 0/0:0:0:0:0:26:0%:47:1E0:52:26:10:16:26 0/0:0:0:0:0:41:0%:78:1E0:49:41:16:25:41 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:26:0%:47:1E0:50:26:16:10:26 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:48 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:12 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:53 0/0:0:0:0:0:39:0%:74:1E0:44:39:24:15:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:54:0%:99:1E0:42:54:30:24:54 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:35 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:44 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:52:0%:96:1E0:44:52:32:20:53 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:46 0/0:0:0:0:0:54:0%:99:1E0:45:54:24:30:54 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:37:1:1:0:27:3.7%:41:5E-1:38:26:15:11:28 0/0:38:1:1:0:17:5.88%:24:5E-1:44:16:6:10:17 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:42 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:0:0:0:0:19:0%:37:1E0:46:19:13:6:19 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:42 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:47 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:29 0/0:0:0:0:0:49:0%:93:1E0:46:49:24:25:50 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:55 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:60:0%:99:1E0:45:60:27:33:60 0/0:38:1:0:1:26:3.85%:38:5E-1:43:25:14:11:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:37 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/0:60:1:1:0:26:3.85%:38:5E-1:49:25:8:17:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:37:0%:70:1E0:49:37:13:24:37 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:40:0%:74:1E0:50:40:19:21:40 0/0:0:0:0:0:53:0%:99:1E0:42:53:37:16:53 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:37:1:0:1:32:3.12%:48:5E-1:42:31:19:12:32 0/0:0:0:0:0:37:0%:70:1E0:47:37:23:14:37 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:60:0%:99:1E0:40:60:35:25:60 0/0:60:1:0:1:33:3.03%:52:5E-1:45:32:22:10:33 0/0:0:0:0:0:29:0%:55:1E0:49:29:21:8:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 0/0:39:1:0:1:39:2.56%:62:5E-1:42:38:15:23:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:17 0/0:0:0:0:0:46:0%:85:1E0:47:46:24:22:46 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:22 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:33:0%:63:1E0:50:33:23:10:33 0/0:0:0:0:0:45:0%:85:1E0:39:45:18:27:46 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:14:28:43 0/0:0:0:0:0:21:0%:40:1E0:44:21:5:16:21 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:35 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:45 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:20 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:31 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:31 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:16 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:32 0/0:0:0:0:0:51:0%:97:1E0:37:51:34:17:51 0/0:0:0:0:0:35:0%:67:1E0:38:35:20:15:35 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:5:17:23 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:47 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:24 0/0:0:0:0:0:60:0%:99:1E0:37:60:29:31:60 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:45:0%:85:1E0:38:45:24:21:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:42 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:37 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:20:13:34 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:56:0%:99:1E0:40:56:30:26:57 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:44 0/0:0:0:0:0:17:0%:33:1E0:42:17:13:4:17 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:53:0%:99:1E0:44:53:17:36:55 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:40 MTB_anc 3447910 . G A . PASS AC=18;AF=0.060;AN=300;ANN=A|stop_gained|HIGH|virS_Rv3082c|gene3151|transcript|Transcript_gene3151|Coding|1/1|c.517C>T|p.Gln173*|517/1023|517/1023|173/340||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3447910G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3447910G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:44:56:29:27:57 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:16 0/0:0:0:0:0:51:0%:97:1E0:47:51:26:25:51 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 1/1:44:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:50:34:22:12:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:29 0/0:0:0:0:0:39:0%:74:1E0:50:39:20:19:39 1/1:44:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:41:0%:78:1E0:46:41:26:15:45 0/0:0:0:0:0:15:0%:29:1E0:49:15:8:7:15 0/0:0:0:0:0:60:0%:99:1E0:47:60:29:31:61 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:17:0%:33:1E0:46:17:5:12:17 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:31 0/0:0:0:0:0:52:0%:96:1E0:44:52:31:21:53 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:12:31:43 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 1/1:49:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:31:0%:59:1E0:51:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:45:0%:85:1E0:49:45:21:24:46 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:54:0%:99:1E0:48:54:27:27:54 0/0:47:2:1:1:42:4.76%:57:2.4699E-1:46:40:20:20:43 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:38:1:0:1:42:2.38%:66:5E-1:42:41:22:19:42 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:43 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:23 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 1/1:43:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:36 0/0:0:0:0:0:31:0%:59:1E0:54:31:17:14:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:0:0:0:0:51:0%:97:1E0:44:51:24:27:51 0/0:0:0:0:0:42:0%:77:1E0:50:42:24:18:43 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:53:0%:99:1E0:41:53:20:33:53 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:20:15:36 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:57:0%:99:1E0:43:57:22:35:58 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:46 0/0:0:0:0:0:25:0%:48:1E0:43:25:8:17:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:27:16:46 0/0:0:0:0:0:48:0%:89:1E0:48:48:25:23:48 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:43:0%:82:1E0:48:43:24:19:43 0/0:0:0:0:0:55:0%:99:1E0:48:55:34:21:55 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:40:0%:74:1E0:49:40:14:26:40 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:47:35:22:13:36 0/0:60:1:1:0:38:2.63%:58:5E-1:49:37:21:16:38 0/0:0:0:0:0:32:0%:59:1E0:51:32:22:10:33 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:60:1:1:0:53:1.89%:88:5E-1:41:52:28:24:54 0/0:0:0:0:0:35:0%:67:1E0:49:35:22:13:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:23:0%:44:1E0:49:23:8:15:24 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:46:40:27:13:40 0/0:0:0:0:0:21:0%:40:1E0:53:21:10:11:21 0/0:0:0:0:0:55:0%:99:1E0:41:55:25:30:57 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:42 0/0:0:0:0:0:52:0%:96:1E0:43:52:28:24:53 0/0:0:0:0:0:26:0%:47:1E0:46:26:19:7:27 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:19 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:26:0%:47:1E0:48:26:9:17:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:23 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:22 0/0:0:0:0:0:58:0%:99:1E0:42:58:25:33:60 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:47 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:46 0/0:0:0:0:0:49:0%:93:1E0:37:49:21:28:50 0/0:0:0:0:0:45:0%:85:1E0:40:45:28:17:46 0/0:0:0:0:0:48:0%:89:1E0:38:48:14:34:49 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:47:0%:89:1E0:39:47:17:30:47 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:54:0%:99:1E0:41:54:30:24:55 0/0:0:0:0:0:47:0%:89:1E0:38:47:21:26:48 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:39 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:35 0/0:0:0:0:0:46:0%:85:1E0:44:46:33:13:46 0/0:0:0:0:0:57:0%:99:1E0:39:57:23:34:57 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:43 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:28 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:58:0%:99:1E0:42:58:37:21:59 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 MTB_anc 3448254 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|virS_Rv3082c|gene3151|transcript|Transcript_gene3151|Coding|1/1|c.173C>T|p.Ala58Val|173/1023|173/1023|58/340||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3448254G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3448254G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:43:53:24:29:53 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:15 0/0:60:1:1:0:61:1.64%:99:5E-1:46:60:34:26:62 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:35 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:32 0/0:0:0:0:0:40:0%:74:1E0:51:40:20:20:40 0/0:0:0:0:0:28:0%:51:1E0:48:28:7:21:30 0/0:0:0:0:0:28:0%:51:1E0:47:28:8:20:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:24 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:48 0/0:0:0:0:0:15:0%:29:1E0:48:15:10:5:15 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:43 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:26 0/0:0:0:0:0:61:0%:99:1E0:41:61:32:29:62 0/0:60:1:1:0:36:2.78%:55:5E-1:46:35:20:15:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:26:13:39 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:35 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:18 0/0:0:0:0:0:34:0%:62:1E0:45:34:24:10:34 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:41 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 0/0:38:1:1:0:27:3.7%:41:5E-1:45:26:13:13:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:46 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:70:0%:99:1E0:44:70:36:34:71 0/0:0:0:0:0:63:0%:99:1E0:43:63:28:35:63 0/0:0:0:0:0:58:0%:99:1E0:46:58:30:28:59 0/0:0:0:0:0:38:0%:70:1E0:43:38:27:11:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:42 0/0:0:0:0:0:20:0%:36:1E0:42:20:3:17:20 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:46 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:48 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:25 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:47 0/0:38:1:1:0:38:2.63%:58:5E-1:41:37:13:24:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:31 0/0:0:0:0:0:51:0%:97:1E0:41:51:29:22:53 0/0:32:1:1:0:35:2.86%:55:5E-1:45:34:10:24:35 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:46 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:52 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:49:0%:93:1E0:44:49:30:19:51 0/0:60:1:1:0:55:1.82%:91:5E-1:45:54:30:24:55 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:48:0%:89:1E0:48:48:26:22:49 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:43 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:42 0/0:50:1:1:0:20:5%:27:5E-1:49:19:7:12:20 0/0:0:0:0:0:42:0%:77:1E0:48:42:17:25:42 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:42:0%:78:1E0:49:41:24:17:43 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:28 0/0:0:0:0:0:51:0%:97:1E0:40:51:34:17:51 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:37:0%:70:1E0:49:37:22:15:38 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:28:7:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:30:0%:55:1E0:51:30:16:14:31 0/0:38:1:1:0:46:2.17%:73:5E-1:49:45:25:20:46 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:49:0%:93:1E0:46:49:23:26:49 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:28 0/0:0:0:0:0:49:0%:93:1E0:40:49:29:20:52 0/0:0:0:0:0:42:0%:77:1E0:45:42:15:27:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:40 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:29:16:45 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:33 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:19 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:38:34:17:17:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:41 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:36 0/0:0:0:0:0:51:0%:97:1E0:38:51:23:28:54 0/0:0:0:0:0:38:0%:70:1E0:38:38:16:22:40 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:53 0/0:0:0:0:0:63:0%:99:1E0:40:63:34:29:63 0/0:0:0:0:0:27:0%:52:1E0:39:27:21:6:27 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:35 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:47 0/0:0:0:0:0:45:0%:85:1E0:41:45:28:17:47 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:49 0/0:0:0:0:0:38:0%:70:1E0:38:38:19:19:43 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:39 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:43 0/0:0:0:0:0:39:0%:74:1E0:37:39:22:17:40 0/0:60:1:1:0:46:2.17%:73:5E-1:40:45:22:23:48 0/0:0:0:0:0:52:0%:96:1E0:37:52:29:23:55 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:45 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:38 0/0:0:0:0:0:39:0%:74:1E0:38:39:11:28:43 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:57:0%:99:1E0:37:57:31:26:60 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:46 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:41 0/0:0:0:0:0:49:0%:93:1E0:38:49:28:21:50 0/0:0:0:0:0:47:0%:89:1E0:44:47:30:17:47 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:38 0/0:38:1:0:1:31:3.23%:48:5E-1:39:30:7:23:32 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:41 0/0:0:0:0:0:53:0%:99:1E0:43:53:30:23:56 0/0:0:0:0:0:37:0%:70:1E0:40:37:25:12:39 MTB_anc 3449566 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3083_Rv3083|gene3152|transcript|Transcript_gene3152|Coding|1/1|c.1063G>A|p.Gly355Arg|1063/1488|1063/1488|355/495||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3449566G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3449566G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|isoniazid_ethionamide_prothionamide|||n.3449566G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:15:19:35:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:52:28:24:53:98.11%:99:8.609E-30:38:1:0:1:55 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:52:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:72:36:36:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:46:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:46:16:30:47:97.87%:99:2.9526E-26:60:1:0:1:47 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:52:37:15:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:52:39:17:22:40:97.5%:99:3.8137E-22:32:1:0:1:41 1/1:43:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:51:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:50:16:34:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:61:28:33:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 3450111 . GGC G . PASS AC=4;AF=0.013;AN=300;ANN=G|frameshift_variant|HIGH|lipR_Rv3084|gene3153|transcript|Transcript_gene3153|Coding|1/1|c.124_125delGC|p.Ala42fs|124/927|124/927|42/308||INFO_REALIGN_3_PRIME,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3450112_3450113delGC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3450112_3450113delGC||||||;HET=0;LOF=(lipR_Rv3084|gene3153|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:42:53:31:22:54 0/0:0:0:0:0:20:0%:36:1E0:52:20:11:9:20 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:55 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:15 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:33 0/0:60:1:0:1:26:3.85%:38:5E-1:46:25:13:12:27 0/0:0:0:0:0:52:0%:96:1E0:42:52:23:29:52 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:16 0/0:0:0:0:0:58:0%:99:1E0:44:58:36:22:58 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:48:26:16:10:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:22 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:46 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:37 0/0:0:0:0:0:28:0%:51:1E0:46:28:8:20:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:28:0%:51:1E0:48:28:18:10:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:43 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:28 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:41 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 0/0:0:0:0:0:39:0%:74:1E0:42:39:25:14:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:58:0%:99:1E0:46:58:31:27:58 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:42 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:42 0/0:0:0:0:0:45:0%:85:1E0:39:45:16:29:45 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:13:0%:25:1E0:46:13:8:5:13 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:32 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:47:0%:89:1E0:41:47:29:18:48 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:29 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:22 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:43 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:47:0%:89:1E0:40:47:28:19:48 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:32:0%:59:1E0:49:32:13:19:33 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:48 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:40:0%:74:1E0:46:40:23:17:41 0/0:0:0:0:0:34:0%:62:1E0:51:34:20:14:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:20:8:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:31:0%:59:1E0:50:31:16:15:31 0/0:0:0:0:0:15:0%:29:1E0:51:15:9:6:15 0/0:0:0:0:0:29:0%:55:1E0:50:29:16:13:30 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:40 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:34 0/0:0:0:0:0:58:0%:99:1E0:44:58:30:28:59 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:19 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:24 0/0:0:0:0:0:19:0%:37:1E0:51:19:8:11:19 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:67:0%:99:1E0:38:66:38:28:68 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:51 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:40:0%:74:1E0:38:40:21:19:42 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:45 0/0:0:0:0:0:16:0%:29:1E0:43:16:13:3:16 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:60:1:0:1:25:4%:38:5E-1:39:24:14:10:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:37 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:29 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:40 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:32:1:0:1:28:3.57%:41:5E-1:38:27:13:14:28 0/0:0:0:0:0:54:0%:99:1E0:41:54:31:23:54 0/0:0:0:0:0:56:0%:99:1E0:42:56:25:31:56 0/0:60:1:1:0:36:2.78%:55:5E-1:40:35:19:16:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:54:0%:99:1E0:38:54:35:19:56 0/0:34:1:1:0:33:3.03%:52:5E-1:38:32:13:19:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:42:0%:77:1E0:39:42:24:18:46 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:46 1/1:39:30:16:14:31:96.77%:99:6.8754E-17:30:1:1:0:31 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:38 1/1:38:34:14:20:34:97.14%:99:3.2089E-19:37:1:1:0:36 0/0:0:0:0:0:31:0%:59:1E0:36:31:18:13:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:26:0%:47:1E0:35:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:48:34:21:13:35 0/0:0:0:0:0:46:0%:85:1E0:38:46:25:21:46 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:38:1:0:1:39:2.56%:62:5E-1:41:38:22:16:39 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:21 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:36 0/0:0:0:0:0:23:0%:44:1E0:41:23:9:14:23 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:45 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 MTB_anc 3451097 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv3085_Rv3085|gene3154|transcript|Transcript_gene3154|Coding|1/1|c.178G>A|p.Asp60Asn|178/831|178/831|60/276||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3451097G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3451097G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:51 0/0:0:0:0:0:17:0%:33:1E0:45:17:7:10:17 0/0:0:0:0:0:56:0%:99:1E0:44:56:29:27:57 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:21 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:47 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:43 0/0:0:0:0:0:17:0%:33:1E0:50:17:10:7:18 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:47 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:43 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:20 0/0:0:0:0:0:25:0%:48:1E0:43:25:19:6:26 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 0/0:0:0:0:0:37:0%:70:1E0:50:37:20:17:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:35 0/0:0:0:0:0:60:0%:99:1E0:44:60:31:29:60 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:44:0%:81:1E0:45:44:27:17:45 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:23 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:44 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:43:0%:82:1E0:49:43:22:21:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:26:0%:47:1E0:48:26:18:8:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:28:15:43 0/0:0:0:0:0:45:0%:85:1E0:43:45:30:15:45 0/0:0:0:0:0:57:0%:99:1E0:46:57:33:24:58 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:43 0/0:0:0:0:0:59:0%:99:1E0:47:59:36:23:60 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:45 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:37:1:1:0:36:2.78%:55:5E-1:44:35:20:15:37 0/0:0:0:0:0:44:0%:81:1E0:41:44:16:28:47 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:36 0/0:0:0:0:0:62:0%:99:1E0:44:62:37:25:65 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:46 0/0:0:0:0:0:36:0%:66:1E0:48:36:24:12:36 0/0:0:0:0:0:19:0%:37:1E0:50:19:8:11:19 0/0:0:0:0:0:45:0%:85:1E0:44:45:27:18:45 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:46 0/0:0:0:0:0:46:0%:85:1E0:45:46:21:25:46 0/0:0:0:0:0:59:0%:99:1E0:44:59:30:29:60 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:23 0/0:0:0:0:0:68:0%:99:1E0:42:68:36:32:68 0/0:0:0:0:0:41:0%:78:1E0:51:41:21:20:44 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:34 0/0:0:0:0:0:52:0%:96:1E0:45:52:28:24:53 0/0:0:0:0:0:39:0%:74:1E0:44:39:24:15:43 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:55:0%:99:1E0:46:55:31:24:55 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:53:0%:99:1E0:45:53:33:20:53 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:60:1:1:0:25:4%:38:5E-1:46:24:10:14:26 0/0:0:0:0:0:35:0%:67:1E0:47:35:26:9:35 1/1:50:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:23:0%:44:1E0:47:23:17:6:23 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:24 0/0:0:0:0:0:56:0%:99:1E0:41:56:31:25:58 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:53:26:17:9:27 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:61:0%:99:1E0:44:61:29:32:64 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:26:14:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:38:0%:70:1E0:49:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:49:26:18:8:26 0/0:0:0:0:0:25:0%:48:1E0:51:25:15:10:26 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:26 0/0:0:0:0:0:56:0%:99:1E0:42:56:35:21:56 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:64:0%:99:1E0:44:64:38:26:64 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:30 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:26 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:24 0/0:0:0:0:0:45:0%:85:1E0:44:45:31:14:46 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:27 0/0:24:1:0:1:34:2.94%:51:5E-1:45:33:22:11:34 0/0:0:0:0:0:34:0%:62:1E0:38:34:20:14:34 0/0:0:0:0:0:57:0%:99:1E0:39:57:31:26:57 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:17 0/0:0:0:0:0:57:0%:99:1E0:43:57:33:24:58 0/0:0:0:0:0:43:0%:82:1E0:40:43:18:25:45 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:56:0%:99:1E0:40:56:35:21:59 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:34 0/0:0:0:0:0:53:0%:99:1E0:42:53:30:23:55 0/0:0:0:0:0:33:0%:63:1E0:37:33:19:14:37 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:57 0/0:0:0:0:0:39:0%:74:1E0:40:39:27:12:40 0/0:0:0:0:0:39:0%:74:1E0:38:39:23:16:41 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:37 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:44 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:32 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:47 0/0:0:0:0:0:49:0%:93:1E0:39:49:28:21:51 0/0:38:1:1:0:53:1.89%:88:5E-1:41:52:27:25:53 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:43 0/0:0:0:0:0:44:0%:81:1E0:39:44:28:16:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:24 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:19 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:56:0%:99:1E0:43:56:26:30:56 0/0:0:0:0:0:49:0%:93:1E0:43:49:31:18:51 0/0:0:0:0:0:42:0%:77:1E0:38:42:21:21:43 MTB_anc 3453603 . T G . PASS AC=10;AF=0.033;AN=300;ANN=G|missense_variant|MODERATE|Rv3087_Rv3087|gene3156|transcript|Transcript_gene3156|Coding|1/1|c.679T>G|p.Ser227Ala|679/1419|679/1419|227/472||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3453603T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3453603T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:44:53:25:28:54 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:44 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:24 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:16 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:27 0/0:37:1:1:0:18:5.56%:24:5E-1:48:17:10:7:18 0/0:0:0:0:0:14:0%:25:1E0:48:14:5:9:15 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:51 0/0:0:0:0:0:7:0%:14:1E0:41:7:4:3:9 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:15 1/1:45:12:8:4:13:92.31%:58:1.3461E-6:37:1:1:0:13 0/0:0:0:0:0:31:0%:59:1E0:38:31:11:20:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:27 0/0:0:0:0:0:50:0%:92:1E0:42:50:25:25:51 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:12:26:38 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:14:0%:25:1E0:42:14:8:6:15 0/0:0:0:0:0:20:0%:36:1E0:51:20:12:8:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:23:9:32 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:19 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:20 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:40 0/0:0:0:0:0:45:0%:85:1E0:42:45:27:18:47 0/0:0:0:0:0:55:0%:99:1E0:44:55:31:24:56 0/0:0:0:0:0:45:0%:85:1E0:45:45:27:18:47 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:44 0/0:0:0:0:0:35:0%:67:1E0:39:35:22:13:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:17:19:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:24:10:35 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:45 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:28 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:40:0%:74:1E0:38:40:22:18:43 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:20 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:29 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:46 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:47 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:43 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:30 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:42 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:43 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:24 0/0:0:0:0:0:16:0%:29:1E0:49:16:6:10:17 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:33:0%:63:1E0:48:33:11:22:33 0/0:0:0:0:0:24:0%:44:1E0:51:24:9:15:25 0/0:0:0:0:0:27:0%:52:1E0:51:27:15:12:28 0/0:0:0:0:0:52:0%:96:1E0:41:52:27:25:56 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:29:0%:55:1E0:37:29:15:14:29 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:27 0/0:0:0:0:0:29:0%:55:1E0:36:29:10:19:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:21 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:49 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:37 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:26:11:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:16 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:24 0/0:0:0:0:0:28:0%:51:1E0:47:28:8:20:28 0/0:0:0:0:0:20:0%:36:1E0:49:20:6:14:20 0/0:37:1:0:1:49:2.04%:80:5E-1:38:48:30:18:51 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:22 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:44 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:18 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:26 0/0:0:0:0:0:32:0%:59:1E0:38:32:16:16:34 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:36 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:31 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:17 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:29 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:28 0/0:0:0:0:0:39:0%:74:1E0:37:39:20:19:42 0/0:0:0:0:0:37:0%:70:1E0:37:37:17:20:42 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:28 0/0:0:0:0:0:10:0%:17:1E0:42:10:7:3:12 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:38 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:29 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:44 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:36 0/0:0:0:0:0:35:0%:67:1E0:37:35:20:15:38 0/0:0:0:0:0:41:0%:78:1E0:39:41:15:26:45 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:42 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:33 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:41 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:45 0/0:0:0:0:0:20:0%:36:1E0:40:20:14:6:21 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:59:0%:99:1E0:36:59:29:30:59 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:43 0/0:0:0:0:0:35:0%:67:1E0:38:35:21:14:36 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:23:0%:44:1E0:48:23:15:8:24 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:20 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:47:0%:89:1E0:40:47:21:26:51 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:30 MTB_anc 3454263 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3087_Rv3087|gene3156|transcript|Transcript_gene3156|Coding|1/1|c.1339G>C|p.Val447Leu|1339/1419|1339/1419|447/472||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3454263G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3454263G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:58:38:20:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:23:9:14:24:95.83%:99:7.7525E-13:60:1:0:1:25 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:48:34:14:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:37:18:19:38:97.37%:99:5.6582E-21:34:1:0:1:39 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:61:36:25:61:100%:99:2.609E-36:0:0:0:0:61 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 3457514 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|fadD13_Rv3089-Rv3090_Rv3090|gene3158-gene3159|intergenic_region|gene3158-gene3159|||n.3457514C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:31:13:18:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:43:21:22:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:16:19:36:97.22%:99:8.9137E-21:0:0:0:0:38 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:39:22:17:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:44:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:46:24:22:47:97.87%:99:2.4343E-27:0:0:0:0:51 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:15:13:29:96.55%:99:9.9776E-16:37:1:0:1:30 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:41:16:25:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:32:14:18:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:45:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:29:16:13:30:96.67%:99:3.3259E-17:0:0:0:0:32 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:38:30:15:15:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:50:34:16:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 3460957 . G T . PASS AC=2;AF=6.711e-03;AN=298;ANN=T|missense_variant|MODERATE|Rv3092c_Rv3092c|gene3161|transcript|Transcript_gene3161|Coding|1/1|c.778C>A|p.His260Asn|778/921|778/921|260/306||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3460957G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3460957G>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:38:50:29:21:51 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:52:0%:96:1E0:42:52:34:18:54 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:28 0/0:0:0:0:0:46:0%:85:1E0:41:46:29:17:49 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:16:0%:29:1E0:47:16:9:7:16 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:22 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:55:0%:99:1E0:42:55:26:29:57 0/0:0:0:0:0:14:0%:25:1E0:44:14:5:9:14 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 1/1:38:45:29:16:46:97.83%:99:1.1441E-25:38:1:0:1:47 0/0:0:0:0:0:19:0%:37:1E0:54:19:9:10:20 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:39:1:1:0:21:4.76%:31:5E-1:42:20:9:11:22 0/0:0:0:0:0:27:0%:52:1E0:37:27:19:8:27 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:18:7:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:45 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:46 0/0:0:0:0:0:50:0%:92:1E0:41:50:28:22:51 0/0:0:0:0:0:45:0%:85:1E0:42:45:33:12:46 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:32 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:42 0/0:0:0:0:0:22:0%:40:1E0:38:22:14:8:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:24:11:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:32:0%:59:1E0:40:32:25:7:33 0/0:0:0:0:0:16:0%:29:1E0:42:16:10:6:16 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:25 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:53 0/0:0:0:0:0:36:0%:66:1E0:42:36:26:10:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:43:0%:82:1E0:39:43:37:6:43 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:38 0/0:0:0:0:0:53:0%:99:1E0:42:53:28:25:54 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:25:8:34 0/0:0:0:0:0:16:0%:29:1E0:42:16:12:4:17 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:32 0/0:0:0:0:0:46:0%:85:1E0:41:46:28:18:47 0/0:60:1:1:0:29:3.45%:45:5E-1:41:28:12:16:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:36:28:19:9:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:15:0%:29:1E0:43:15:6:9:15 0/0:20:1:1:0:29:3.45%:45:5E-1:40:28:16:12:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:22:14:36 0/0:0:0:0:0:50:0%:92:1E0:42:50:29:21:50 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:48:0%:89:1E0:38:48:29:19:49 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:26 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:26:0%:47:1E0:43:26:19:7:26 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:19 0/0:0:0:0:0:30:0%:55:1E0:40:30:23:7:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:28 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:39 0/0:0:0:0:0:27:0%:52:1E0:39:27:18:9:27 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:22 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:41:0%:78:1E0:39:41:26:15:41 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:19 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:32:0%:59:1E0:36:32:19:13:35 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:40 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:36 0/0:0:0:0:0:23:0%:44:1E0:38:23:10:13:24 0/0:0:0:0:0:50:0%:92:1E0:41:50:31:19:50 0/0:0:0:0:0:49:0%:93:1E0:40:49:29:20:51 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:27 0/0:0:0:0:0:23:0%:44:1E0:38:23:15:8:24 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:38 0/0:38:1:0:1:31:3.23%:48:5E-1:37:30:20:10:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:26:14:43 0/0:0:0:0:0:32:0%:59:1E0:36:32:21:11:37 0/0:0:0:0:0:42:0%:77:1E0:38:42:21:21:43 0/0:0:0:0:0:38:0%:70:1E0:37:38:21:17:38 0/0:0:0:0:0:42:0%:77:1E0:39:42:28:14:42 0/0:0:0:0:0:30:0%:55:1E0:37:30:17:13:32 0/0:0:0:0:0:35:0%:67:1E0:36:35:18:17:37 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:25:14:40 0/0:0:0:0:0:24:0%:44:1E0:37:24:19:5:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:45:0%:85:1E0:38:45:29:16:47 0/0:0:0:0:0:25:0%:48:1E0:43:25:18:7:25 0/0:0:0:0:0:43:0%:82:1E0:39:43:30:13:44 0/0:0:0:0:0:42:0%:77:1E0:41:42:29:13:43 0/0:0:0:0:0:31:0%:59:1E0:39:31:24:7:32 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:28:0%:51:1E0:37:28:18:10:29 0/0:0:0:0:0:29:0%:55:1E0:39:29:21:8:31 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:37 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:30 0/0:0:0:0:0:46:0%:85:1E0:40:46:27:19:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:33 MTB_anc 3461794 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv3093c_Rv3093c|gene3162|transcript|Transcript_gene3162|Coding|1/1|c.971A>G|p.Tyr324Cys|971/1005|971/1005|324/334||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3461794T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3461794T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:37:56:35:21:58 0/0:0:0:0:0:10:0%:17:1E0:41:10:9:1:10 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:38 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:20:7:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:16:6:23 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:33 0/0:0:0:0:0:27:0%:52:1E0:39:27:18:9:28 0/0:0:0:0:0:50:0%:92:1E0:40:50:25:25:52 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:47:0%:89:1E0:38:47:24:23:49 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:22 0/0:0:0:0:0:26:0%:47:1E0:39:26:18:8:26 0/0:0:0:0:0:17:0%:33:1E0:39:17:11:6:18 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:28 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:36:0%:66:1E0:41:36:25:11:39 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:21 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:41 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:25 0/0:0:0:0:0:12:0%:21:1E0:46:12:8:4:12 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:19 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:24 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:42 0/0:0:0:0:0:22:0%:40:1E0:39:22:17:5:23 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:19 0/0:37:1:1:0:30:3.33%:44:5E-1:42:29:18:11:32 0/0:0:0:0:0:44:0%:81:1E0:38:44:28:16:45 0/0:0:0:0:0:36:0%:66:1E0:39:36:23:13:36 0/0:0:0:0:0:57:0%:99:1E0:41:57:37:20:58 0/0:0:0:0:0:38:0%:70:1E0:39:38:27:11:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:36:0%:66:1E0:39:36:22:14:36 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:38 0/0:0:0:0:0:20:0%:36:1E0:38:20:14:6:21 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:26:11:37 0/0:0:0:0:0:45:0%:85:1E0:38:45:28:17:46 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:36 0/0:0:0:0:0:41:0%:78:1E0:39:41:26:15:41 0/0:0:0:0:0:44:0%:81:1E0:41:44:28:16:45 0/0:0:0:0:0:21:0%:40:1E0:37:21:16:5:22 0/0:0:0:0:0:45:0%:85:1E0:38:45:29:16:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:19:4:24 0/0:0:0:0:0:47:0%:89:1E0:38:47:29:18:49 0/0:0:0:0:0:30:0%:55:1E0:37:30:19:11:30 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:26 0/0:37:1:0:1:33:3.03%:52:5E-1:37:32:22:10:34 0/0:0:0:0:0:39:0%:74:1E0:41:39:26:13:41 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:22 0/0:0:0:0:0:33:0%:63:1E0:38:33:20:13:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:39 0/0:0:0:0:0:47:0%:89:1E0:39:47:25:22:47 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:14:0%:25:1E0:42:14:8:6:14 0/0:60:1:1:0:37:2.7%:59:5E-1:37:36:22:14:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:37:1:0:1:27:3.7%:41:5E-1:42:26:20:6:28 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:39:0%:74:1E0:38:39:23:16:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:26:0%:47:1E0:36:26:14:12:27 0/0:0:0:0:0:18:0%:32:1E0:37:18:12:6:18 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:30 0/0:0:0:0:0:40:0%:74:1E0:40:40:24:16:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:17:0%:33:1E0:37:17:11:6:19 0/0:0:0:0:0:21:0%:40:1E0:39:21:15:6:21 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:12 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:39:24:17:7:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:23 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:18 0/0:0:0:0:0:51:0%:97:1E0:37:51:32:19:51 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:37:0%:70:1E0:38:37:25:12:37 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:24:0%:44:1E0:37:24:19:5:26 0/0:0:0:0:0:27:0%:52:1E0:37:27:14:13:29 0/0:0:0:0:0:49:0%:93:1E0:38:49:32:17:51 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:35 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:19 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:28 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:21:8:30 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:18 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:28 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:20 0/0:0:0:0:0:41:0%:78:1E0:40:41:27:14:41 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:25 0/0:0:0:0:0:40:0%:74:1E0:39:40:27:13:40 0/0:0:0:0:0:31:0%:59:1E0:36:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:23 0/0:34:1:1:0:25:4%:38:5E-1:39:24:14:10:26 0/0:0:0:0:0:36:0%:66:1E0:37:36:22:14:36 0/0:0:0:0:0:27:0%:52:1E0:36:27:19:8:32 0/0:0:0:0:0:38:0%:70:1E0:37:38:25:13:38 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:22 0/0:0:0:0:0:35:0%:67:1E0:41:35:23:12:37 0/0:0:0:0:0:28:0%:51:1E0:38:28:20:8:28 0/0:0:0:0:0:34:0%:62:1E0:37:34:18:16:34 0/0:0:0:0:0:57:0%:99:1E0:39:57:32:25:57 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:39:0%:74:1E0:35:39:22:17:40 0/0:0:0:0:0:30:0%:55:1E0:37:30:21:9:31 0/0:0:0:0:0:36:0%:66:1E0:39:36:24:12:38 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:28 0/0:0:0:0:0:37:0%:70:1E0:38:37:29:8:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:36 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:21 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:39:28:18:10:28 0/0:0:0:0:0:44:0%:81:1E0:39:44:27:17:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:0:0:0:0:40:0%:74:1E0:38:40:23:17:42 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:35 0/0:0:0:0:0:28:0%:51:1E0:38:28:18:10:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:14:4:18 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:46:0%:85:1E0:38:46:34:12:47 0/0:0:0:0:0:31:0%:59:1E0:38:31:20:11:33 MTB_anc 3462145 . A AGGCGC . PASS AC=255;AF=0.850;AN=300;ANN=AGGCGC|frameshift_variant|HIGH|Rv3093c_Rv3093c|gene3162|transcript|Transcript_gene3162|Coding|1/1|c.615_619dupGCGCC|p.Leu207fs|619/1005|619/1005|207/334||,AGGCGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3462145_3462146insGGCGC||||||,AGGCGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3462145_3462146insGGCGC||||||;LOF=(Rv3093c_Rv3093c|gene3162|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:46:24:22:53:86.79%:99:6.1571E-23:35:7:3:4:53 1/1:49:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:46:28:18:51:90.2%:99:9.5589E-24:49:5:2:3:51 0/1:49:17:11:6:19:89.47%:82:5.9414E-9:37:2:0:2:19 1/1:43:30:14:16:32:90.91%:99:9.89E-16:34:3:0:3:34 0/1:41:26:13:13:29:83.87%:99:8.0999E-13:37:5:4:1:31 0/1:47:23:11:12:26:88.46%:99:7.3681E-12:47:3:1:2:26 1/1:49:14:6:8:13:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:19:12:7:21:90.48%:93:4.7003E-10:36:2:1:1:21 1/1:45:27:15:12:29:90%:99:4.6134E-14:51:3:2:1:30 1/1:47:22:15:7:23:95.65%:99:2.9149E-12:32:1:0:1:24 0/1:42:28:13:15:31:87.5%:99:3.2142E-14:41:4:2:2:32 0/1:43:18:8:10:21:85.71%:84:3.7603E-9:45:3:1:2:21 1/1:42:50:30:20:51:94.34%:99:4.4193E-27:35:3:1:2:53 1/1:45:23:12:11:24:95.83%:99:7.7525E-13:34:1:1:0:24 1/1:47:23:10:13:24:95.83%:99:7.7525E-13:34:1:1:0:24 0/1:50:17:8:9:20:85%:82:5.9414E-9:34:2:0:2:20 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 0/1:42:14:10:4:17:77.78%:63:4.8851E-7:37:3:1:2:18 1/1:45:21:11:10:23:91.3%:99:3.6437E-11:42:2:2:0:23 1/1:41:35:19:16:38:92.11%:99:1.5466E-18:37:3:3:0:39 1/1:44:55:26:29:58:93.22%:99:2.4456E-29:38:4:0:4:59 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 0/1:45:27:13:14:31:87.1%:99:4.6134E-14:42:3:0:3:32 1/1:43:33:18:15:36:91.67%:99:2.0653E-17:37:3:2:1:36 1/1:41:21:7:14:22:91.3%:99:3.6437E-11:35:2:0:2:23 1/1:43:36:20:16:38:94.74%:99:1.1316E-19:48:2:2:0:38 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:21:13:37:91.89%:99:5.6582E-18:36:3:1:2:37 1/1:42:31:14:17:34:91.18%:99:8.2416E-17:36:2:0:2:34 1/1:42:38:20:18:38:95%:99:8.0088E-21:36:2:0:2:40 1/1:44:27:19:8:28:96.43%:99:3.7915E-15:38:1:0:1:28 1/1:44:21:9:12:22:91.3%:99:1.0931E-11:31:1:1:0:23 0/1:43:22:11:11:25:88%:99:2.5916E-11:34:3:1:2:26 1/1:52:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 0/1:42:41:19:22:44:89.13%:99:5.7183E-21:36:5:3:2:46 1/1:44:36:22:14:38:90%:99:1.2627E-18:35:4:2:2:40 1/1:45:43:14:29:43:95.56%:99:1.0412E-23:34:2:1:1:45 1/1:46:28:15:13:28:96.55%:99:9.9776E-16:35:1:0:1:29 1/1:44:52:32:20:54:94.55%:99:3.1317E-28:34:3:2:1:55 1/1:45:36:17:19:38:94.74%:99:1.1316E-19:33:2:2:0:38 1/1:43:39:20:19:43:90.7%:99:2.6872E-20:41:4:2:2:44 1/1:44:23:17:6:25:92%:99:2.7767E-12:37:2:2:0:25 0/1:38:24:13:11:25:88.89%:99:2.0853E-12:33:3:1:2:27 1/1:45:29:18:11:30:96.67%:99:2.6212E-16:30:1:0:1:30 1/1:42:30:17:13:31:93.75%:99:3.0612E-16:36:2:1:1:32 1/1:44:32:16:16:34:94.12%:99:2.2142E-17:48:2:1:1:34 1/1:42:36:17:19:36:94.74%:99:1.1316E-19:35:2:2:0:38 0/1:44:43:22:21:48:89.58%:99:4.4594E-22:39:5:3:2:48 1/1:43:26:15:11:26:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 0/1:40:37:18:19:44:80.43%:99:4.4107E-18:34:7:3:4:46 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:14:12:27:96.3%:99:1.4382E-14:32:1:1:0:27 1/1:40:32:19:13:34:94.12%:99:2.2142E-17:42:2:1:1:34 0/1:42:28:15:13:34:82.35%:99:6.9527E-14:41:5:3:2:34 1/1:41:25:11:14:26:92.59%:99:2.0853E-13:35:2:2:0:27 1/1:42:21:8:13:20:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:43:44:18:26:45:97.78%:99:4.4304E-25:38:1:0:1:46 0/1:45:24:18:6:26:85.71%:99:4.7015E-12:38:4:3:1:28 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:34:18:16:35:94.44%:99:1.5887E-18:35:2:2:0:36 1/1:45:34:24:10:36:94.44%:99:1.5887E-18:46:2:1:1:36 1/1:47:24:12:12:24:92.31%:99:7.6222E-13:33:2:0:2:26 1/1:39:33:21:12:36:91.67%:99:2.0653E-17:43:3:1:2:36 1/1:44:46:23:23:50:92%:99:3.1346E-24:33:4:2:2:50 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:17:12:29:96.67%:99:2.6212E-16:36:1:0:1:30 0/1:49:15:7:8:19:78.95%:66:2.5053E-7:42:4:3:1:20 0/1:45:10:6:4:14:66.67%:44:3.3652E-5:35:2:0:2:15 1/1:49:29:11:18:30:96.67%:99:2.6212E-16:37:1:1:0:31 0/1:42:17:8:9:20:85%:78:1.2848E-8:35:3:3:0:20 1/1:47:23:10:13:24:95.83%:99:7.7525E-13:35:1:1:0:24 0/1:49:17:10:7:19:85%:78:1.2848E-8:51:3:2:1:20 0/1:38:34:16:18:38:87.18%:99:1.6239E-17:33:4:2:2:39 1/1:46:19:10:9:21:90.48%:93:4.7003E-10:35:2:0:2:21 1/1:46:37:16:21:39:97.37%:99:5.6582E-21:34:1:1:0:39 1/1:51:33:22:11:36:91.67%:99:2.0653E-17:43:3:1:2:37 1/1:43:30:16:14:32:90.91%:99:9.89E-16:36:3:1:2:33 1/1:36:35:21:14:35:92.11%:99:1.5466E-18:33:3:2:1:38 1/1:45:27:20:7:29:93.1%:99:3.7915E-15:34:1:0:1:29 0/1:41:35:18:17:39:89.74%:99:4.5343E-18:36:4:1:3:39 0/1:38:25:14:11:27:86.21%:99:1.3609E-12:48:4:3:1:29 1/1:45:32:19:13:35:91.43%:99:7.5196E-17:49:3:1:2:35 1/1:42:33:13:20:34:97.06%:99:1.2301E-18:36:1:1:0:34 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:25:18:7:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:42:15:7:8:16:93.75%:75:2.8282E-8:33:1:0:1:16 0/1:44:19:11:8:22:86.36%:89:1.0931E-9:35:3:2:1:22 1/1:42:20:11:9:22:90.91%:98:1.3117E-10:33:2:0:2:22 1/1:47:29:16:13:31:93.55%:99:1.1344E-15:49:2:1:1:31 1/1:46:19:10:9:20:95%:98:1.5234E-10:50:1:1:0:20 1/1:38:46:23:23:46:95.83%:99:1.9036E-25:36:2:0:2:48 0/1:44:21:9:12:23:87.5%:99:9.0704E-11:50:3:1:2:24 1/1:46:63:36:27:63:98.44%:99:2.7139E-36:34:1:0:1:64 1/1:40:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:27:15:12:26:96.43%:99:3.7915E-15:36:1:1:0:29 0/1:42:22:9:13:26:84.62%:99:5.5261E-11:36:4:2:2:26 0/1:45:40:22:18:46:86.96%:99:2.0407E-20:36:5:4:1:46 1/1:45:28:12:16:31:90.32%:99:4.194E-15:36:2:1:1:31 0/1:44:24:11:13:27:88.89%:99:2.0853E-12:51:3:1:2:27 1/1:43:36:25:11:40:90%:99:1.2627E-18:41:4:0:4:40 0/1:44:25:17:8:29:86.21%:99:5.8768E-13:35:3:2:1:29 1/1:40:28:13:15:28:96.55%:99:9.9776E-16:48:1:1:0:29 1/1:45:19:8:11:21:90.48%:93:4.7003E-10:34:2:1:1:21 1/1:44:29:16:13:30:93.55%:99:1.1344E-15:36:2:2:0:32 0/1:42:26:17:9:28:89.66%:99:1.6496E-13:35:3:1:2:30 0/1:44:17:8:9:20:85%:78:1.2848E-8:43:3:1:2:20 1/1:43:28:14:14:31:90.32%:99:1.2857E-14:30:3:1:2:31 1/1:42:36:23:13:39:92.31%:99:4.2179E-19:52:3:1:2:39 0/1:43:26:17:9:28:86.67%:99:3.9214E-13:35:4:2:2:30 1/1:44:40:22:18:42:95.24%:99:5.6346E-22:33:2:1:1:42 0/1:39:20:10:10:23:86.96%:95:3.1579E-10:36:3:1:2:23 1/1:44:44:22:22:45:95.65%:99:2.7459E-24:34:2:0:2:46 1/1:39:33:14:19:35:94.29%:99:5.9366E-18:32:2:0:2:36 0/1:39:25:11:14:29:86.21%:99:1.3609E-12:34:4:3:1:29 0/1:40:20:13:7:25:80%:89:1.1273E-9:40:5:3:2:26 1/1:44:31:15:16:32:93.94%:99:8.2416E-17:48:2:1:1:33 1/1:44:19:11:8:19:95%:98:1.5234E-10:37:1:1:0:20 1/1:46:48:27:21:49:97.96%:99:1.9625E-27:32:1:1:0:49 1/1:41:46:26:20:51:90.2%:99:9.5589E-24:33:5:1:4:51 0/1:42:26:11:15:30:86.67%:99:3.9214E-13:34:4:3:1:30 0/1:40:12:6:6:14:80%:52:5.2605E-6:33:3:3:0:15 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 0/1:40:24:15:9:26:88.89%:99:2.0853E-12:35:3:2:1:28 1/1:44:38:21:17:40:92.68%:99:3.1178E-20:33:3:1:2:41 0/1:39:32:20:12:38:84.21%:99:1.0241E-15:35:6:2:4:39 1/1:40:42:23:19:44:91.3%:99:5.6062E-22:35:4:2:2:46 1/1:38:29:21:8:32:90.62%:99:3.5714E-15:35:3:1:2:33 1/1:40:32:14:18:34:94.12%:99:2.2142E-17:37:2:1:1:34 1/1:42:34:21:13:37:91.89%:99:5.6582E-18:34:3:1:2:37 0/1:41:30:21:9:33:88.24%:99:9.89E-16:33:3:2:1:34 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/1:41:35:16:19:38:89.74%:99:4.5343E-18:35:4:3:1:39 0/1:42:24:10:14:27:88.89%:99:2.0853E-12:32:3:0:3:27 1/1:41:33:16:17:35:94.29%:99:5.9366E-18:34:2:1:1:35 1/1:39:41:20:21:42:97.62%:99:2.5612E-23:32:1:0:1:42 1/1:42:30:12:18:29:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:25:12:13:25:96.15%:99:5.4444E-14:38:1:0:1:26 0/1:39:33:17:16:36:89.19%:99:5.7997E-17:35:4:3:1:37 0/1:42:28:15:13:32:87.5%:99:3.2142E-14:35:4:3:1:33 1/1:42:22:11:11:23:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:38:16:22:39:97.44%:99:1.4697E-21:32:1:1:0:39 1/1:41:26:18:8:25:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:18:10:8:19:94.74%:92:5.6585E-10:36:1:1:0:19 1/1:44:22:13:9:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:42:36:24:12:40:90%:99:1.2627E-18:33:4:4:0:40 0/1:39:40:22:18:45:88.89%:99:7.413E-21:42:4:2:2:45 1/1:38:31:14:17:34:91.18%:99:2.7308E-16:44:3:2:1:36 MTB_anc 3464629 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3096_Rv3096|gene3165|transcript|Transcript_gene3165|Coding|1/1|c.83G>A|p.Gly28Glu|83/1140|83/1140|28/379||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3464629G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3464629G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:48:19:9:10:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:48:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:20:11:9:21:95.24%:99:4.0873E-11:33:1:1:0:21 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:50:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:37:17:20:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:42:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:53:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:60:25:35:60:100%:99:1.035E-35:0:0:0:0:62 1/1:47:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:41:14:27:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:45:25:14:11:26:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:51:26:25:52:98.08%:99:3.3479E-29:24:1:0:1:54 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:65:24:41:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:54:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:51:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:60:35:25:60:100%:99:1.035E-35:0:0:0:0:64 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:49:19:30:49:100%:99:3.925E-29:0:0:0:0:50 1/1:49:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:45:48:34:14:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 3465812 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|lipY_Rv3097c|gene3166|transcript|Transcript_gene3166|Coding|1/1|c.1280C>T|p.Pro427Leu|1280/1314|1280/1314|427/437||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3465812G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3465812G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:21:14:7:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:68:35:33:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:45:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:37:23:14:38:97.37%:99:5.6582E-21:37:1:1:0:39 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:68:36:32:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:79:47:32:79:100%:99:4.3185E-47:0:0:0:0:79 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:60:25:35:60:100%:99:1.035E-35:0:0:0:0:62 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 3466919 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|lipY_Rv3097c|gene3166|transcript|Transcript_gene3166|Coding|1/1|c.173C>G|p.Ala58Gly|173/1314|173/1314|58/437||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3466919G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3466919G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:23:11:12:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:47:20:11:9:21:95.24%:99:4.0873E-11:24:1:1:0:23 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:39:14:25:40:97.5%:99:3.8137E-22:60:1:0:1:41 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:52:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:36:19:17:37:97.3%:99:2.1762E-20:51:1:1:0:38 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:21:17:39:97.44%:99:1.4697E-21:33:1:1:0:39 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:60:25:35:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:28:14:14:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:32:18:14:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:27:16:11:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:44:28:16:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 3467000 . T A . PASS AC=124;AF=0.413;AN=300;ANN=A|missense_variant|MODERATE|lipY_Rv3097c|gene3166|transcript|Transcript_gene3166|Coding|1/1|c.92A>T|p.Gln31Leu|92/1314|92/1314|31/437||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3467000T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3467000T>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:45 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:9:0%:18:1E0:40:9:5:4:9 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:17:0%:33:1E0:46:17:11:6:18 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:21:9:12:22:95.45%:99:1.0931E-11:38:1:0:1:23 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:40 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:19:0%:37:1E0:40:19:14:5:19 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:37 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:20:0%:36:1E0:49:20:14:6:20 0/0:36:1:1:0:23:4.35%:34:5E-1:46:22:10:12:23 0/0:0:0:0:0:21:0%:40:1E0:41:21:16:5:21 1/1:40:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:46:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:24:0%:44:1E0:49:24:18:6:24 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 0/0:38:1:0:1:35:2.86%:55:5E-1:42:34:20:14:35 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:25:0%:48:1E0:45:25:18:7:25 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 0/0:0:0:0:0:31:0%:59:1E0:43:31:22:9:32 1/1:47:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 0/0:0:0:0:0:24:0%:44:1E0:40:24:17:7:25 1/1:41:35:18:17:36:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:24 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:54:0%:99:1E0:42:54:24:30:55 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:33 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:31 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:25:12:38 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:22:8:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:21:5:27 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:22 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:20:0%:36:1E0:42:20:16:4:22 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:32:0%:59:1E0:38:32:23:9:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:20 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:37 0/0:0:0:0:0:35:0%:67:1E0:39:35:22:13:38 0/0:0:0:0:0:27:0%:52:1E0:36:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:27 0/0:0:0:0:0:43:0%:82:1E0:39:43:27:16:45 0/0:0:0:0:0:39:0%:74:1E0:39:39:22:17:39 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:19 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:18 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:44 0/0:0:0:0:0:26:0%:47:1E0:39:26:19:7:30 0/0:0:0:0:0:27:0%:52:1E0:35:27:16:11:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:17:8:27 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:44 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:38 0/0:0:0:0:0:30:0%:55:1E0:39:30:19:11:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:33 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:25:12:39 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:26 0/0:0:0:0:0:19:0%:37:1E0:38:19:15:4:19 1/1:37:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:20 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:23 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 3467465 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv3098c_Rv3098c|gene3167|transcript|Transcript_gene3167|Coding|1/1|c.198C>G|p.Ala66Ala|198/453|198/453|66/150||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3467465G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3467465G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:61:36:25:61:100%:99:2.609E-36:0:0:0:0:61 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:54:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:51:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:67:32:35:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:68:30:38:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:44:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:49:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:33:15:18:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:68:26:42:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:46:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:73:38:35:73:100%:99:1.7006E-43:0:0:0:0:74 1/1:43:61:33:28:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:62:37:25:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:32:15:17:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:39:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:60:36:24:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 3473996 . G GA . PASS AC=300;AF=1.00;AN=300;ANN=GA|custom|MODIFIER|||CUSTOM&additionnal_annotations|RBS|||n.3473996_3473997insA||||||,GA|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3473996_3473997insA||||||,GA|intergenic_region|MODIFIER|prfB_Rv3105c-fprA_Rv3106|gene3176-gene3177|intergenic_region|gene3176-gene3177|||n.3473996_3473997insA||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:54:30:24:55:98.18%:99:5.6837E-31:33:1:1:0:55 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:21:9:12:23:91.3%:99:3.6437E-11:34:2:1:1:23 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:37:22:15:36:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:50:30:13:17:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:45:30:19:11:30:96.77%:99:6.8754E-17:35:1:0:1:31 1/1:45:50:28:22:51:98.04%:99:1.3013E-28:32:1:1:0:51 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:69:31:38:70:98.57%:99:7.5676E-40:34:1:1:0:70 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:37:15:22:38:94.87%:99:3.0128E-20:30:2:1:1:39 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:28:9:19:29:96.55%:99:9.9776E-16:33:1:1:0:29 1/1:43:22:14:8:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:39:17:22:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:45:43:13:30:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:16:17:33:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:48:24:14:10:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:44:37:17:20:37:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:46:36:14:22:37:97.3%:99:2.1762E-20:24:1:1:0:37 1/1:47:30:15:15:30:96.77%:99:6.8754E-17:34:1:1:0:31 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:30:16:14:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:43:36:11:25:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:29:12:17:30:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:44:35:21:14:36:97.22%:99:8.3613E-20:32:1:0:1:36 1/1:47:48:22:26:50:96%:99:1.3143E-26:47:2:0:2:50 1/1:47:56:26:30:55:100%:99:2.5602E-33:0:0:0:0:56 1/1:50:40:19:21:40:97.56%:99:9.8874E-23:33:1:1:0:41 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:49:22:27:52:94.23%:99:1.6572E-26:52:3:2:1:52 1/1:46:18:11:7:20:90%:87:1.6758E-9:37:2:2:0:20 1/1:43:25:15:10:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:45:37:17:20:39:94.87%:99:3.0128E-20:33:2:1:1:39 1/1:44:41:21:20:42:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:18:19:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:11:23:34:97.14%:99:3.2089E-19:50:1:1:0:35 1/1:44:44:27:17:45:95.65%:99:4.4304E-25:35:1:0:1:46 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:35:11:24:36:97.22%:99:8.3613E-20:33:1:0:1:36 1/1:47:28:14:14:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:44:20:24:46:95.65%:99:2.7459E-24:46:2:0:2:46 1/1:45:33:18:15:34:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:40:21:19:41:97.56%:99:9.8874E-23:60:1:1:0:41 1/1:47:22:10:12:23:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:44:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:53:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:38:19:19:39:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:45:56:34:22:56:98.25%:99:3.7452E-32:33:1:1:0:57 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:50:27:23:49:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:28:12:16:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:46:34:17:17:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:19:6:13:20:95%:98:1.5234E-10:34:1:0:1:20 1/1:45:20:10:10:21:95.24%:99:4.0873E-11:33:1:1:0:21 1/1:46:38:22:16:38:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:51:36:18:18:37:97.3%:99:2.1762E-20:34:1:1:0:37 1/1:52:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:40:24:16:42:95.24%:99:5.6346E-22:34:2:1:1:42 1/1:41:43:28:15:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:37:21:16:38:97.37%:99:5.6582E-21:60:1:1:0:38 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:21:8:28:96.67%:99:2.6212E-16:33:1:1:0:30 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:38:17:21:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:29:12:17:30:96.67%:99:2.6212E-16:35:1:0:1:30 1/1:45:22:11:11:23:95.65%:99:2.9149E-12:60:1:0:1:23 1/1:49:35:19:16:35:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:34:22:12:36:94.44%:99:1.5887E-18:32:2:2:0:36 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:49:21:28:50:98%:99:5.0549E-28:34:1:0:1:50 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:35:14:21:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:52:28:24:51:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:42:22:20:43:97.67%:99:6.6289E-24:35:1:0:1:43 1/1:42:30:17:13:32:90.91%:99:9.89E-16:55:3:2:1:33 1/1:45:25:11:14:26:96.15%:99:5.4444E-14:33:1:1:0:26 1/1:43:37:21:16:38:97.37%:99:5.6582E-21:35:1:0:1:38 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:31:15:16:32:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:49:17:32:49:96.08%:99:5.0549E-28:37:1:0:1:50 1/1:38:33:20:13:33:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:45:40:20:20:41:97.56%:99:9.8874E-23:32:1:0:1:41 1/1:42:24:17:7:23:100%:99:3.101E-14:0:0:0:0:24 1/1:44:51:26:25:52:98.08%:99:3.3479E-29:33:1:0:1:52 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:49:31:18:47:100%:99:3.925E-29:0:0:0:0:49 1/1:43:34:20:14:33:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:54:32:22:55:98.18%:99:5.6837E-31:32:1:0:1:55 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:55:34:21:54:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:48:23:25:48:97.96%:99:1.9625E-27:33:1:0:1:49 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:35:22:13:36:97.22%:99:8.3613E-20:36:1:1:0:36 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:12:29:41:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:38:39:17:22:39:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:44:41:28:13:41:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:40:57:32:25:57:98.28%:99:9.6072E-33:33:1:0:1:58 1/1:41:45:25:20:46:97.83%:99:1.1441E-25:60:1:1:0:46 1/1:44:42:19:23:42:97.67%:99:6.6289E-24:34:1:1:0:43 1/1:40:42:20:22:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:38:17:21:39:97.44%:99:1.4697E-21:38:1:1:0:39 1/1:42:44:16:28:45:95.65%:99:2.7459E-24:36:2:2:0:46 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:50:26:24:48:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:56:29:27:56:98.25%:99:3.7452E-32:37:1:1:0:57 1/1:43:43:23:20:42:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 3475159 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|fprA_Rv3106|gene3177|transcript|Transcript_gene3177|Coding|1/1|c.1153G>A|p.Asp385Asn|1153/1371|1153/1371|385/456||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3475159G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3475159G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:61:32:29:61:100%:99:2.609E-36:0:0:0:0:63 1/1:48:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:62:26:36:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:51:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:67:29:38:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:52:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:64:35:29:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:22:12:35:97.14%:99:3.2089E-19:38:1:0:1:35 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:57:29:28:58:98.28%:99:9.6072E-33:37:1:0:1:58 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:38:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:42:18:24:43:97.67%:99:6.6289E-24:60:1:0:1:45 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:67:33:34:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 MTB_anc 3480789 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv3114_Rv3114|gene3185|transcript|Transcript_gene3185|Coding|1/1|c.31C>T|p.Pro11Ser|31/531|31/531|11/176||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3480789C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3480789C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:54:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:37:17:20:38:97.37%:99:5.6582E-21:35:1:0:1:40 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:54:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:57:37:20:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:50:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:38:16:22:39:97.44%:99:1.4697E-21:37:1:0:1:41 1/1:47:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:52:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:68:36:32:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:54:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:38:21:17:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:52:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:15:16:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:48:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:70:33:37:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:42:62:43:19:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:33:16:17:34:97.06%:99:1.2301E-18:30:1:0:1:36 1/1:42:61:33:28:61:100%:99:2.609E-36:0:0:0:0:63 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:66:31:35:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:44:60:30:30:61:98.36%:99:1.6176E-34:60:1:0:1:63 1/1:42:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:63:32:31:63:100%:99:1.657E-37:0:0:0:0:65 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 3481475 . G A . PASS AC=285;AF=0.990;AN=288;ANN=A|missense_variant|MODERATE|Rv3115_Rv3115|gene3186|transcript|Transcript_gene3186|Coding|1/1|c.25G>A|p.Ala9Thr|25/1248|25/1248|9/415||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3481475G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3481475G>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:44:17:9:8:18:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:53:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:47:15:6:9:16:93.75%:75:2.8282E-8:60:1:0:1:17 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:15:9:6:16:93.75%:75:2.8282E-8:60:1:0:1:16 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 0/1:44:12:3:9:14:85.71%:55:2.9913E-6:36:2:0:2:14 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:17:4:13:18:94.44%:86:2.0936E-9:60:1:0:1:20 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:12:7:5:13:92.31%:58:1.3461E-6:60:1:0:1:14 0/1:40:14:7:7:16:87.5%:65:2.5454E-7:37:2:0:2:16 1/1:45:11:7:4:12:91.67%:53:4.8074E-6:38:1:1:0:13 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:14:7:7:15:93.33%:69:1.0315E-7:60:1:0:1:17 1/1:44:16:6:10:17:94.12%:81:7.7134E-9:38:1:1:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:5:7:13:92.31%:58:1.3461E-6:38:1:0:1:15 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:15:9:6:16:93.75%:75:2.8282E-8:38:1:1:0:16 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:40:8:4:4:10:80%:34:3.5723E-4:49:2:1:1:11 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:46:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:53:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:53:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:50:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:12:3:9:13:92.31%:58:1.3461E-6:60:1:0:1:14 1/1:43:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:21:6:15:22:95.45%:99:1.0931E-11:38:1:0:1:23 1/1:40:15:5:10:16:93.75%:75:2.8282E-8:60:1:1:0:17 1/1:46:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:12:5:7:13:92.31%:58:1.3461E-6:60:1:1:0:13 1/1:48:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:6:4:11:90.91%:47:1.7011E-5:60:1:0:1:12 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:19:13:6:20:95%:98:1.5234E-10:60:1:0:1:21 1/1:45:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:46:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:20:12:8:21:95.24%:99:4.0873E-11:36:1:0:1:23 1/1:40:15:8:7:16:93.75%:75:2.8282E-8:38:1:0:1:20 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 MTB_anc 3482432 . C A . PASS AC=29;AF=0.659;AN=44;ANN=A|missense_variant|MODERATE|Rv3115_Rv3115|gene3186|transcript|Transcript_gene3186|Coding|1/1|c.982C>A|p.Gln328Lys|982/1248|982/1248|328/415||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3482432C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3482432C>A||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 0/0:39:1:1:0:9:11.11%:11:5E-1:37:8:8:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:36:7:7:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:6:3:3:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:18:0%:32:1E0:36:18:17:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:37:9:8:1:9 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 0/0:0:0:0:0:12:0%:21:1E0:37:12:11:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3488820 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv3123_Rv3123|gene3194|transcript|Transcript_gene3194|Coding|1/1|c.252C>T|p.His84His|252/495|252/495|84/164||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3488820C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3488820C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:62:0%:99:1E0:40:62:35:27:62 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:26 0/0:0:0:0:0:44:0%:81:1E0:48:44:22:22:45 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:25 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:18 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:35 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:20 0/0:60:1:0:1:68:1.47%:99:5E-1:44:67:31:36:68 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:22 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:51 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:36:0%:66:1E0:45:36:12:24:37 0/0:0:0:0:0:46:0%:85:1E0:44:46:17:29:47 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:23 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:25:12:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:35 0/0:0:0:0:0:66:0%:99:1E0:48:66:34:32:67 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:53:0%:99:1E0:45:53:27:26:54 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:50:0%:92:1E0:45:50:24:26:51 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:47 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:0:0:0:0:61:0%:99:1E0:42:61:32:29:63 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:46 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:0:0:0:0:54:0%:99:1E0:43:54:26:28:54 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:50:0%:92:1E0:44:50:27:23:50 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:50 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:60:1:1:0:34:2.94%:51:5E-1:46:33:19:14:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:21 0/0:0:0:0:0:15:0%:29:1E0:50:15:8:7:15 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:24:0%:44:1E0:53:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:52:0%:96:1E0:44:52:31:21:52 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:28 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:35:0%:67:1E0:41:35:25:10:35 0/0:0:0:0:0:59:0%:99:1E0:43:59:25:34:61 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/1:38:14:7:7:31:45.16%:50:9.1194E-6:43:17:10:7:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:10:22:32 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:25:0%:48:1E0:51:25:14:11:25 0/0:0:0:0:0:59:0%:99:1E0:39:59:27:32:59 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:50:0%:92:1E0:41:50:20:30:50 0/0:38:1:0:1:27:3.7%:41:5E-1:42:26:14:12:28 0/0:0:0:0:0:20:0%:36:1E0:38:20:13:7:20 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:18:11:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:37:0%:70:1E0:38:37:24:13:37 0/0:0:0:0:0:40:0%:74:1E0:37:40:20:20:45 0/0:0:0:0:0:26:0%:47:1E0:40:26:18:8:29 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:43 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:41 0/0:0:0:0:0:54:0%:99:1E0:42:54:25:29:54 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:26 0/0:0:0:0:0:49:0%:93:1E0:39:49:21:28:50 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:38 0/0:0:0:0:0:35:0%:67:1E0:39:35:13:22:35 0/0:0:0:0:0:38:0%:70:1E0:35:38:24:14:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:40 0/0:0:0:0:0:49:0%:93:1E0:41:49:26:23:49 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:37 0/0:0:0:0:0:42:0%:77:1E0:39:42:22:20:44 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:42 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:48 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:42 0/0:0:0:0:0:44:0%:81:1E0:38:44:25:19:44 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:35 0/0:0:0:0:0:56:0%:99:1E0:41:56:27:29:56 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:40 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:53 0/0:0:0:0:0:35:0%:67:1E0:43:35:11:24:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:64:0%:99:1E0:42:64:34:30:65 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 MTB_anc 3490409 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|intergenic_region|MODIFIER|moaR1_Rv3124-PPE49_Rv3125c|gene3195-gene3196|intergenic_region|gene3195-gene3196|||n.3490409G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:48 0/0:0:0:0:0:22:0%:40:1E0:53:22:12:10:22 0/0:0:0:0:0:43:0%:82:1E0:47:43:22:21:45 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:32 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:19:7:28 0/0:0:0:0:0:35:0%:67:1E0:53:35:21:14:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:48:33:22:11:33 0/0:0:0:0:0:45:0%:85:1E0:45:45:11:34:45 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:53:0%:99:1E0:46:53:29:24:53 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:49:29:10:19:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:52:0%:96:1E0:46:52:25:27:52 0/0:0:0:0:0:38:0%:70:1E0:47:38:15:23:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:20:0%:36:1E0:52:20:13:7:20 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:23:0%:44:1E0:50:23:16:7:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:23:0%:44:1E0:45:23:16:7:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:20:0%:36:1E0:50:20:7:13:20 0/0:0:0:0:0:45:0%:85:1E0:50:45:23:22:45 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:34 0/0:0:0:0:0:40:0%:74:1E0:48:40:23:17:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:39:0%:74:1E0:47:39:13:26:39 0/0:0:0:0:0:75:0%:99:1E0:49:75:36:39:76 0/0:0:0:0:0:46:0%:85:1E0:50:46:23:23:46 0/0:0:0:0:0:39:0%:74:1E0:45:39:27:12:39 0/0:0:0:0:0:24:0%:44:1E0:40:24:12:12:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:18:9:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:21 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:23 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:6:25:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:51:0%:97:1E0:48:51:29:22:52 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:51:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:58:0%:99:1E0:47:58:38:20:60 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:13:28:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:50:0%:92:1E0:45:50:27:23:52 0/0:0:0:0:0:19:0%:37:1E0:45:19:15:4:19 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:17:0%:33:1E0:52:17:11:6:19 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:40:0%:74:1E0:50:40:21:19:40 0/0:0:0:0:0:40:0%:74:1E0:48:40:25:15:40 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:26 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:30:1:1:0:22:4.55%:31:5E-1:46:21:11:10:22 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:30:0%:55:1E0:48:30:19:11:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:30 0/0:0:0:0:0:45:0%:85:1E0:48:45:21:24:45 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:45:0%:85:1E0:46:45:30:15:45 0/0:0:0:0:0:31:0%:59:1E0:54:31:19:12:31 0/0:0:0:0:0:48:0%:89:1E0:40:48:24:24:48 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:46 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:25 0/0:60:1:0:1:36:2.78%:55:5E-1:45:35:19:16:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:28 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:24:13:37 0/0:0:0:0:0:53:0%:99:1E0:44:53:32:21:53 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:32 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:55 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:47 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:43:0%:82:1E0:43:43:17:26:44 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:52:0%:96:1E0:41:52:30:22:54 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:54:0%:99:1E0:40:54:26:28:56 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:37 0/0:0:0:0:0:51:0%:97:1E0:42:51:21:30:53 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:51:0%:97:1E0:41:51:22:29:52 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:41 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:36 0/0:0:0:0:0:27:0%:52:1E0:38:27:8:19:27 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:65:0%:99:1E0:39:65:33:32:67 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:54:0%:99:1E0:44:54:30:24:54 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:59:0%:99:1E0:42:59:31:28:60 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 MTB_anc 3498350 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|devS_Rv3132c|gene3203|transcript|Transcript_gene3203|Coding|1/1|c.916C>T|p.Arg306Trp|916/1737|916/1737|306/578||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3498350G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3498350G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3498350G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:17:0%:33:1E0:49:17:7:10:17 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:45 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:20:8:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:29 0/0:0:0:0:0:27:0%:52:1E0:50:27:10:17:27 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:45 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:22 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:50 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:20 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:24 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:19 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:21 0/0:0:0:0:0:51:0%:97:1E0:46:51:23:28:53 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:19 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:31 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:9:20:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:10:21:34 0/0:0:0:0:0:25:0%:48:1E0:40:25:9:16:25 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:48:0%:89:1E0:40:48:21:27:49 0/1:46:13:8:5:59:22.03%:42:5.818E-5:41:46:25:21:60 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:44 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:48 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:36:1:1:0:48:2.08%:76:5E-1:41:47:20:27:48 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:18 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:44 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:43 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:47 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:6:21:29 0/0:0:0:0:0:52:0%:96:1E0:45:52:30:22:52 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:38 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:27 0/0:0:0:0:0:29:0%:55:1E0:37:29:17:12:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:21:8:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:26:0%:47:1E0:53:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:50:0%:92:1E0:40:50:31:19:50 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:43 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:37 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:44 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:9:21:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:18 0/0:34:1:1:0:27:3.7%:41:5E-1:42:26:14:12:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:22 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:48:0%:89:1E0:37:48:22:26:51 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:40 0/0:0:0:0:0:26:0%:47:1E0:39:26:19:7:27 0/0:0:0:0:0:52:0%:96:1E0:41:52:23:29:52 0/0:0:0:0:0:62:0%:99:1E0:39:62:26:36:62 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:0:0:0:0:40:0%:74:1E0:38:40:19:21:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:38 0/0:0:0:0:0:49:0%:93:1E0:40:49:27:22:51 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:36 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:53 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:40 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:41 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:34 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:47:0%:89:1E0:38:47:26:21:49 0/0:0:0:0:0:39:0%:74:1E0:41:39:29:10:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:38:0%:70:1E0:38:38:18:20:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:47 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:42 0/0:0:0:0:0:60:0%:99:1E0:42:60:26:34:61 0/0:0:0:0:0:22:0%:40:1E0:38:22:14:8:25 MTB_anc 3498418 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|devS_Rv3132c|gene3203|transcript|Transcript_gene3203|Coding|1/1|c.848C>T|p.Thr283Ile|848/1737|848/1737|283/578||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3498418G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3498418G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3498418G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:51:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:52:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:49:31:18:49:100%:99:3.925E-29:0:0:0:0:52 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:39:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:69:27:42:69:100%:99:4.233E-41:0:0:0:0:69 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:50:16:34:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:67:29:38:67:100%:99:6.6743E-40:0:0:0:0:70 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 3498632 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|devS_Rv3132c|gene3203|transcript|Transcript_gene3203|Coding|1/1|c.634C>T|p.Arg212Cys|634/1737|634/1737|212/578||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3498632G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3498632G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3498632G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:42:55:25:30:55 0/0:0:0:0:0:14:0%:25:1E0:56:14:6:8:15 0/0:0:0:0:0:56:0%:99:1E0:48:56:36:20:56 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:29 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:20 0/0:0:0:0:0:54:0%:99:1E0:43:54:27:27:56 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:25 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:28:0%:51:1E0:47:28:18:10:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:23:0%:44:1E0:51:23:17:6:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:30 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:55:0%:99:1E0:45:55:30:25:55 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:27 0/0:0:0:0:0:43:0%:82:1E0:46:43:20:23:43 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:46 0/0:60:1:1:0:32:3.12%:48:5E-1:43:31:15:16:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:38:1:0:1:33:3.03%:52:5E-1:43:32:18:14:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:27 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:43 0/0:0:0:0:0:48:0%:89:1E0:40:48:24:24:48 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:47:0%:89:1E0:46:47:20:27:48 0/0:0:0:0:0:49:0%:93:1E0:49:49:21:28:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:40:0%:74:1E0:45:40:23:17:40 0/0:0:0:0:0:15:0%:29:1E0:50:15:8:7:15 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:42:0%:77:1E0:46:42:17:25:42 0/0:0:0:0:0:27:0%:52:1E0:51:27:9:18:29 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 0/0:60:1:1:0:22:4.55%:31:5E-1:50:21:8:13:22 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:47 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:6:20:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:39 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:56:0%:99:1E0:40:56:33:23:56 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:9:21:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:37 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:24 0/0:0:0:0:0:22:0%:40:1E0:47:22:7:15:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:36 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:21 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:36 0/0:0:0:0:0:29:0%:55:1E0:45:29:20:9:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:24 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:45:0%:85:1E0:39:45:19:26:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:47:0%:89:1E0:40:47:30:17:48 0/0:0:0:0:0:67:0%:99:1E0:43:67:30:37:67 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:28 0/0:0:0:0:0:46:0%:85:1E0:41:46:20:26:48 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:45 0/0:0:0:0:0:49:0%:93:1E0:37:49:25:24:50 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:46 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:40 0/0:0:0:0:0:32:0%:59:1E0:40:32:24:8:34 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:36 0/0:34:1:0:1:38:2.63%:58:5E-1:40:37:17:20:43 0/0:0:0:0:0:38:0%:70:1E0:38:38:19:19:39 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:49:0%:93:1E0:37:49:23:26:52 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:43 0/0:0:0:0:0:54:0%:99:1E0:42:54:17:37:54 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:38 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:38 0/0:0:0:0:0:47:0%:89:1E0:39:47:19:28:49 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/1:44:13:9:4:49:26.53%:43:4.8866E-5:42:36:20:16:50 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:48 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 MTB_anc 3498791 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|devS_Rv3132c|gene3203|transcript|Transcript_gene3203|Coding|1/1|c.475C>T|p.Pro159Ser|475/1737|475/1737|159/578||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3498791G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3498791G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3498791G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:62:0%:99:1E0:44:62:24:38:62 0/0:0:0:0:0:16:0%:29:1E0:50:16:10:6:16 0/0:0:0:0:0:42:0%:77:1E0:47:42:30:12:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:26:0%:47:1E0:46:26:8:18:26 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:25 0/0:0:0:0:0:40:0%:74:1E0:50:40:20:20:40 0/0:0:0:0:0:20:0%:36:1E0:49:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:27 0/0:36:1:1:0:40:2.5%:62:5E-1:45:39:18:21:42 0/0:0:0:0:0:17:0%:33:1E0:48:17:8:9:17 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:48 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:26 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:18:0%:32:1E0:47:18:14:4:18 0/0:0:0:0:0:24:0%:44:1E0:53:24:14:10:24 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:23 0/0:0:0:0:0:43:0%:82:1E0:46:43:20:23:43 0/0:0:0:0:0:32:0%:59:1E0:46:32:22:10:32 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:50:22:14:8:22 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:26 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:30:0%:55:1E0:52:30:15:15:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:32 0/0:0:0:0:0:44:0%:81:1E0:51:44:23:21:45 0/0:0:0:0:0:45:0%:85:1E0:47:45:22:23:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:23 0/0:35:1:1:0:22:4.55%:31:5E-1:40:21:14:7:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:36 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:36 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:36 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:46:28:22:6:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:44:0%:81:1E0:47:44:20:24:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:43 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:61:0%:99:1E0:47:61:33:28:61 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:33 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:16 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:35:0%:67:1E0:52:35:20:15:36 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:35 0/0:0:0:0:0:43:0%:82:1E0:38:43:24:19:43 0/0:0:0:0:0:16:0%:29:1E0:51:16:8:8:17 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:23 0/0:34:1:1:0:26:3.85%:38:5E-1:43:25:12:13:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:18:0%:32:1E0:51:18:8:10:19 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/1:47:11:3:8:39:28.21%:36:2.1547E-4:50:28:15:13:39 0/0:60:1:0:1:29:3.45%:45:5E-1:46:28:16:12:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:29 0/0:0:0:0:0:50:0%:92:1E0:42:50:32:18:52 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:22 0/0:0:0:0:0:50:0%:92:1E0:42:50:30:20:50 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:20 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:30 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:44 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:11:24:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:29 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:41 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:30 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:45 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:36 0/0:0:0:0:0:55:0%:99:1E0:41:55:36:19:57 0/0:0:0:0:0:64:0%:99:1E0:43:64:33:31:64 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:49:0%:93:1E0:39:49:27:22:49 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:49 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:45 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:43 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:41 0/0:0:0:0:0:42:0%:77:1E0:39:42:21:21:43 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:39 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:41 0/0:0:0:0:0:53:0%:99:1E0:41:53:28:25:54 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:38 0/0:0:0:0:0:58:0%:99:1E0:40:58:32:26:59 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:36:0%:66:1E0:46:36:12:24:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:46 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:42:0%:77:1E0:45:42:19:23:43 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:49 0/0:0:0:0:0:39:0%:74:1E0:40:39:29:10:41 MTB_anc 3499093 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|devS_Rv3132c|gene3203|transcript|Transcript_gene3203|Coding|1/1|c.173T>C|p.Val58Ala|173/1737|173/1737|58/578||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3499093A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3499093A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3499093A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:51 0/0:0:0:0:0:29:0%:55:1E0:52:29:10:19:29 0/0:0:0:0:0:41:0%:78:1E0:47:41:27:14:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:38 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:51:28:13:15:29 0/0:0:0:0:0:41:0%:78:1E0:49:41:17:24:41 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:29 0/0:0:0:0:0:46:0%:85:1E0:46:46:30:16:48 0/0:0:0:0:0:26:0%:47:1E0:51:26:19:7:26 0/0:0:0:0:0:38:0%:70:1E0:49:38:21:17:40 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:44:0%:81:1E0:45:44:28:16:44 0/0:0:0:0:0:34:0%:62:1E0:47:34:20:14:34 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:27:0%:52:1E0:52:27:15:12:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:55:0%:99:1E0:46:55:29:26:57 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:36:1:1:0:30:3.33%:44:5E-1:45:29:15:14:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:35 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:27:0%:52:1E0:49:27:18:9:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:30:0%:55:1E0:51:30:11:19:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:67:0%:99:1E0:49:67:43:24:68 0/0:0:0:0:0:41:0%:78:1E0:45:41:15:26:41 0/0:0:0:0:0:54:0%:99:1E0:44:54:29:25:55 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:26:0%:47:1E0:50:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:39 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:21:0%:40:1E0:52:21:14:7:21 0/0:0:0:0:0:34:0%:62:1E0:41:34:23:11:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:19:6:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:43 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:20 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:53:0%:99:1E0:45:53:31:22:53 0/0:0:0:0:0:35:0%:67:1E0:44:35:12:23:35 0/0:0:0:0:0:20:0%:36:1E0:46:20:7:13:20 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:40:0%:74:1E0:48:40:19:21:41 0/0:0:0:0:0:59:0%:99:1E0:45:59:33:26:59 0/0:0:0:0:0:28:0%:51:1E0:45:28:20:8:28 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:33 0/0:0:0:0:0:20:0%:36:1E0:47:20:14:6:20 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/1:48:13:9:4:35:37.14%:45:3.1103E-5:49:22:12:10:35 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:50:35:20:15:35 0/0:0:0:0:0:48:0%:89:1E0:42:48:24:24:48 0/0:0:0:0:0:18:0%:32:1E0:48:18:7:11:18 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:26 0/0:0:0:0:0:39:0%:74:1E0:49:39:19:20:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:43 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:33:0%:63:1E0:49:33:14:19:33 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:23 0/0:0:0:0:0:58:0%:99:1E0:42:58:28:30:60 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:34 0/0:0:0:0:0:53:0%:99:1E0:43:53:25:28:54 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:17 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:39 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:42 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:35 0/0:0:0:0:0:18:0%:32:1E0:45:18:12:6:18 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:34:0%:62:1E0:50:34:20:14:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:21:8:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:42:0%:77:1E0:42:42:16:26:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:39 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:43 0/0:0:0:0:0:47:0%:89:1E0:40:47:26:21:48 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:32 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:42 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:41 0/0:0:0:0:0:64:0%:99:1E0:44:64:34:30:64 0/0:0:0:0:0:48:0%:89:1E0:43:48:30:18:48 0/0:0:0:0:0:23:0%:44:1E0:43:23:6:17:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:55:0%:99:1E0:41:55:29:26:56 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:38 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:54 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:49 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:47 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:58:0%:99:1E0:41:58:33:25:59 0/0:0:0:0:0:45:0%:85:1E0:40:45:20:25:48 0/0:0:0:0:0:54:0%:99:1E0:41:54:35:19:54 0/0:0:0:0:0:48:0%:89:1E0:41:48:32:16:50 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:32 0/0:0:0:0:0:54:0%:99:1E0:39:54:29:25:55 0/0:0:0:0:0:39:0%:74:1E0:45:39:27:12:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:54 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:39:0%:70:1E0:41:37:21:16:39 0/0:0:0:0:0:52:0%:96:1E0:44:52:33:19:52 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 MTB_anc 3499106 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|devS_Rv3132c|gene3203|transcript|Transcript_gene3203|Coding|1/1|c.160G>A|p.Ala54Thr|160/1737|160/1737|54/578||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3499106C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3499106C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3499106C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:48 0/0:0:0:0:0:28:0%:51:1E0:50:28:11:17:30 0/0:0:0:0:0:40:0%:74:1E0:47:40:26:14:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:38:0%:70:1E0:50:38:18:20:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:39:0%:74:1E0:49:39:18:21:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:30 0/0:0:0:0:0:47:0%:89:1E0:46:47:31:16:47 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:24 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:43 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:29:15:44 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:25:0%:48:1E0:53:25:14:11:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:58:0%:99:1E0:44:58:31:27:58 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:7:18:25 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:31:0%:59:1E0:49:31:11:20:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:67:0%:99:1E0:50:67:42:25:67 0/0:38:1:1:0:44:2.27%:69:5E-1:46:43:16:27:44 0/0:0:0:0:0:53:0%:99:1E0:46:53:29:24:54 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:37 0/0:0:0:0:0:37:0%:70:1E0:44:37:13:24:38 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:44 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:21:0%:40:1E0:52:21:13:8:21 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:20:6:26 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:45 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:50:0%:92:1E0:46:50:28:22:50 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:7:13:20 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:39:0%:74:1E0:48:39:17:22:41 0/0:0:0:0:0:58:0%:99:1E0:45:58:33:25:59 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:21:10:31 0/0:0:0:0:0:21:0%:40:1E0:48:21:15:6:21 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:35 0/0:0:0:0:0:18:0%:32:1E0:52:18:10:8:18 0/1:50:18:10:8:34:52.94%:67:1.7305E-7:51:16:10:6:34 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:51 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:27 0/0:0:0:0:0:40:0%:74:1E0:49:40:19:21:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:46:0%:85:1E0:45:46:20:26:47 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:50:32:13:19:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:27 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:21 0/0:0:0:0:0:59:0%:99:1E0:42:59:27:32:62 0/0:0:0:0:0:35:0%:67:1E0:45:35:25:10:35 0/0:0:0:0:0:52:0%:96:1E0:45:52:24:28:53 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:16 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:41 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:24:11:36 0/0:0:0:0:0:17:0%:33:1E0:43:17:11:6:18 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:22:9:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:45 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:48 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:36 0/0:0:0:0:0:42:0%:77:1E0:45:42:27:15:43 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:40 0/0:0:0:0:0:63:0%:99:1E0:43:63:35:28:64 0/0:0:0:0:0:48:0%:89:1E0:43:48:30:18:49 0/0:0:0:0:0:24:0%:44:1E0:45:24:6:18:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:26 0/0:0:0:0:0:57:0%:99:1E0:41:57:29:28:59 0/0:0:0:0:0:40:0%:74:1E0:41:40:27:13:41 0/0:0:0:0:0:51:0%:97:1E0:41:51:28:23:52 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:40 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:50 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:44 0/0:0:0:0:0:31:0%:59:1E0:46:31:10:21:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:57:0%:99:1E0:41:57:33:24:58 0/0:0:0:0:0:48:0%:89:1E0:40:48:22:26:48 0/0:0:0:0:0:50:0%:92:1E0:41:50:32:18:51 0/0:0:0:0:0:47:0%:89:1E0:41:47:33:14:49 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:55:0%:99:1E0:39:55:28:27:56 0/0:0:0:0:0:38:0%:70:1E0:44:38:26:12:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:39:1:1:0:51:1.96%:84:5E-1:42:50:25:25:51 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:21 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:43 0/0:0:0:0:0:37:0%:67:1E0:42:35:19:16:38 0/0:0:0:0:0:50:0%:92:1E0:43:50:34:16:52 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:49 MTB_anc 3499111 . A T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|devS_Rv3132c|gene3203|transcript|Transcript_gene3203|Coding|1/1|c.155T>A|p.Val52Glu|155/1737|155/1737|52/578||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3499111A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3499111A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3499111A>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:48 0/0:0:0:0:0:28:0%:51:1E0:49:28:10:18:28 0/0:0:0:0:0:40:0%:74:1E0:47:40:26:14:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:51:35:15:20:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:49:38:18:20:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:49:0%:93:1E0:45:49:33:16:49 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:24 0/0:0:0:0:0:39:0%:74:1E0:48:39:21:18:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:45:0%:85:1E0:44:45:30:15:45 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:36 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:53:25:14:11:26 0/0:35:1:0:1:26:3.85%:38:5E-1:44:25:12:13:26 0/0:0:0:0:0:58:0%:99:1E0:45:58:33:25:60 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:25:0%:48:1E0:46:25:7:18:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:30:0%:55:1E0:50:30:10:20:30 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:29:1:0:1:33:3.03%:52:5E-1:43:32:14:18:33 0/0:0:0:0:0:67:0%:99:1E0:49:67:42:25:67 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:44 0/0:0:0:0:0:52:0%:96:1E0:46:52:29:23:54 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:43 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:45 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:21:0%:40:1E0:51:21:13:8:21 0/0:0:0:0:0:34:0%:62:1E0:42:34:22:12:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:19:6:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:45 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:49:0%:93:1E0:47:49:27:22:50 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:36 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:20 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:41 0/0:0:0:0:0:60:0%:99:1E0:46:60:34:26:61 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:20:9:30 0/0:0:0:0:0:21:0%:40:1E0:48:21:15:6:21 0/0:38:1:0:1:28:3.57%:41:5E-1:48:27:12:15:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:35 0/0:0:0:0:0:19:0%:37:1E0:52:19:10:9:19 0/0:0:0:0:0:33:0%:63:1E0:50:33:20:13:33 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:49 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:40:0%:74:1E0:49:40:19:21:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:45:0%:85:1E0:45:45:20:25:46 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:51:31:12:19:31 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:36 0/0:0:0:0:0:27:0%:52:1E0:48:27:18:9:28 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:21 0/0:0:0:0:0:59:0%:99:1E0:41:59:27:32:61 0/0:0:0:0:0:35:0%:67:1E0:45:35:24:11:37 0/1:44:44:21:23:53:83.02%:99:3.2342E-21:49:9:4:5:53 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:17 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:36 0/0:0:0:0:0:18:0%:32:1E0:44:18:12:6:18 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:26 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:41 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:49 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:48 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:27:16:43 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:40 0/0:39:1:0:1:64:1.56%:99:5E-1:43:63:34:29:64 0/0:0:0:0:0:47:0%:89:1E0:44:47:30:17:47 0/0:0:0:0:0:23:0%:44:1E0:46:23:6:17:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:26 0/0:0:0:0:0:55:0%:99:1E0:42:55:28:27:57 0/0:0:0:0:0:43:0%:82:1E0:43:43:30:13:44 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:52 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:39 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:50 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:39 0/0:0:0:0:0:58:0%:99:1E0:40:58:34:24:60 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:49 0/0:0:0:0:0:51:0%:97:1E0:41:51:33:18:51 0/0:0:0:0:0:46:0%:85:1E0:41:46:32:14:49 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:56:0%:99:1E0:39:56:29:27:57 0/0:0:0:0:0:37:0%:70:1E0:44:37:25:12:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:51 0/0:39:1:0:1:38:2.63%:58:5E-1:41:37:19:18:38 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:21 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:43 0/0:0:0:0:0:40:0%:70:1E0:42:38:21:17:40 0/0:39:1:0:1:51:1.96%:84:5E-1:44:50:34:16:51 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:45 MTB_anc 3499323 . G T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|devR_Rv3133c|gene3204|transcript|Transcript_gene3204|Coding|1/1|c.593C>A|p.Thr198Lys|593/654|593/654|198/217||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3499323G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3499323G>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:41:55:28:27:56 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:0:36:0%:66:1E0:48:36:12:24:36 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:31 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:48 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:43 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:64:0%:99:1E0:42:64:30:34:67 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:35:0%:67:1E0:47:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:20 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:38:1:1:0:26:3.85%:38:5E-1:51:25:15:10:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:7:19:26 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:69:0%:99:1E0:46:69:41:28:70 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:48 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:52 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:42 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:20 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:42 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:46:0%:85:1E0:41:46:20:26:46 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:42 0/0:0:0:0:0:56:0%:99:1E0:41:56:24:32:57 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:44 0/0:0:0:0:0:26:0%:47:1E0:43:26:7:19:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:42 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:29 0/0:0:0:0:0:51:0%:97:1E0:46:51:24:27:52 0/1:45:23:11:12:58:39.66%:81:7.7551E-9:47:35:23:12:58 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:44:26:5:21:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:44:0%:81:1E0:48:44:17:27:44 0/0:0:0:0:0:24:0%:44:1E0:51:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:25:13:38 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:46 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:24 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:44 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:34 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:29 0/0:0:0:0:0:74:0%:99:1E0:40:74:34:40:76 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:52:0%:96:1E0:43:52:26:26:54 0/0:0:0:0:0:21:0%:40:1E0:43:21:6:15:21 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:13:24:38 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:41 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:12:25:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:39 0/0:0:0:0:0:50:0%:92:1E0:39:50:28:22:50 0/0:0:0:0:0:58:0%:99:1E0:40:58:29:29:58 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:43 0/0:0:0:0:0:45:0%:85:1E0:42:45:28:17:47 0/0:0:0:0:0:27:0%:52:1E0:38:27:8:19:27 0/0:0:0:0:0:65:0%:99:1E0:41:65:26:39:66 0/0:0:0:0:0:46:0%:85:1E0:41:46:29:17:46 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:25 0/0:0:0:0:0:57:0%:99:1E0:39:57:22:35:58 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:45 0/0:0:0:0:0:46:0%:85:1E0:36:46:21:25:46 0/0:0:0:0:0:49:0%:93:1E0:39:49:20:29:50 0/0:0:0:0:0:45:0%:85:1E0:38:45:16:29:48 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:42 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:38 0/0:0:0:0:0:52:0%:96:1E0:40:52:23:29:55 0/0:0:0:0:0:45:0%:85:1E0:38:45:25:20:47 0/0:0:0:0:0:46:0%:85:1E0:41:46:24:22:48 0/0:0:0:0:0:39:0%:74:1E0:39:39:17:22:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:53:0%:99:1E0:39:53:22:31:55 0/0:0:0:0:0:38:0%:70:1E0:39:38:24:14:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:23:0%:44:1E0:41:23:7:16:23 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:40 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:45 0/0:0:0:0:0:32:0%:59:1E0:41:32:10:22:33 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:45:0%:85:1E0:41:45:15:30:45 0/0:0:0:0:0:46:0%:85:1E0:44:46:28:18:46 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:39 MTB_anc 3499345 . TG T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|frameshift_variant|HIGH|devR_Rv3133c|gene3204|transcript|Transcript_gene3204|Coding|1/1|c.570delC|p.Lys191fs|570/654|570/654|190/217||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3499346delG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3499346delG||||||;HOM=0;LOF=(devR_Rv3133c|gene3204|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:53 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:36:0%:66:1E0:49:36:15:21:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:32:0%:59:1E0:49:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:49 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:66:0%:99:1E0:43:66:29:37:67 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:26 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:24 0/0:0:0:0:0:40:0%:74:1E0:44:40:14:26:40 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:43 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:62:0%:99:1E0:47:62:36:26:62 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:49 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:21:0%:40:1E0:48:21:13:8:21 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:45 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:39:1:1:0:25:4%:38:5E-1:44:24:16:8:26 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:55:0%:99:1E0:41:55:26:29:57 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:48:0%:89:1E0:45:48:19:29:48 0/0:0:0:0:0:29:0%:55:1E0:42:29:8:21:30 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:35 0/0:0:0:0:0:44:0%:81:1E0:47:44:21:23:44 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:46:0%:85:1E0:48:46:20:26:47 0/0:0:0:0:0:56:0%:99:1E0:46:56:32:24:57 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:8:21:29 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:43 0/0:0:0:0:0:42:0%:77:1E0:50:42:19:23:42 0/0:0:0:0:0:23:0%:44:1E0:51:23:13:10:23 0/0:0:0:0:0:34:0%:62:1E0:50:34:21:13:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:44 0/0:0:0:0:0:17:0%:33:1E0:44:17:13:4:19 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:42 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:27 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:52:34:22:12:34 0/0:0:0:0:0:68:0%:99:1E0:42:68:33:35:69 0/1:43:8:2:6:32:25%:26:2.3764E-3:46:24:10:14:32 0/0:0:0:0:0:57:0%:99:1E0:44:57:26:31:58 0/0:0:0:0:0:18:0%:32:1E0:47:18:5:13:18 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:36:0%:66:1E0:46:36:12:24:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:48 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:53 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:42 0/0:0:0:0:0:46:0%:85:1E0:44:46:31:15:46 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:27 0/0:0:0:0:0:69:0%:99:1E0:42:69:29:40:69 0/0:0:0:0:0:48:0%:89:1E0:42:48:29:19:48 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:31 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:55:0%:99:1E0:41:55:23:32:57 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:44 0/0:0:0:0:0:49:0%:93:1E0:38:49:22:27:50 0/0:0:0:0:0:47:0%:89:1E0:40:47:17:30:47 0/0:0:0:0:0:47:0%:89:1E0:40:47:18:29:49 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:38 0/0:0:0:0:0:52:0%:96:1E0:43:52:24:28:53 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:46 0/0:0:0:0:0:46:0%:85:1E0:42:46:23:23:48 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:54:0%:99:1E0:39:54:25:29:55 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:41 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:48 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:50 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 MTB_anc 3499372 . T C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|devR_Rv3133c|gene3204|transcript|Transcript_gene3204|Coding|1/1|c.544A>G|p.Lys182Glu|544/654|544/654|182/217||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3499372T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3499372T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:54 0/0:0:0:0:0:19:0%:37:1E0:49:19:12:7:20 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:48 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:43 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:48 0/0:0:0:0:0:22:0%:40:1E0:52:22:11:11:23 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:34 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:24 0/0:0:0:0:0:68:0%:99:1E0:44:68:29:39:68 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:39:0%:74:1E0:47:39:19:20:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:35 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:19 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:52:1:0:1:24:4.17%:34:5E-1:49:23:17:6:25 0/0:0:0:0:0:40:0%:74:1E0:45:40:14:26:40 0/0:0:0:0:0:24:0%:44:1E0:47:24:7:17:24 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 0/0:0:0:0:0:60:0%:99:1E0:48:60:34:26:60 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:46 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:48 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:36:0%:66:1E0:48:36:15:21:37 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:21 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:22:0%:40:1E0:48:22:14:8:22 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:45 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:44:0%:81:1E0:49:44:17:27:44 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:38 0/0:30:1:0:1:45:2.22%:73:5E-1:47:44:19:25:46 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:47:0%:89:1E0:50:47:22:25:48 0/0:38:1:1:0:55:1.82%:91:5E-1:45:54:32:22:55 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:17:0%:33:1E0:50:17:8:9:17 0/0:0:0:0:0:30:0%:55:1E0:48:30:9:21:30 0/0:0:0:0:0:41:0%:78:1E0:48:41:23:18:41 0/0:0:0:0:0:44:0%:81:1E0:50:44:19:25:44 0/0:0:0:0:0:22:0%:40:1E0:55:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:48:34:21:13:34 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:20:0%:36:1E0:44:20:15:5:20 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:36:0%:66:1E0:48:36:15:21:36 0/0:0:0:0:0:35:0%:67:1E0:50:35:23:12:35 0/0:0:0:0:0:66:0%:99:1E0:42:66:32:34:70 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:54:0%:99:1E0:44:54:27:27:54 0/0:0:0:0:0:19:0%:37:1E0:46:19:6:13:19 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:38 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:28 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:45 0/0:0:0:0:0:49:0%:93:1E0:40:49:23:26:51 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:0:0:0:0:43:0%:82:1E0:44:43:29:14:43 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:26 0/0:0:0:0:0:72:0%:99:1E0:43:72:31:41:73 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:20 0/0:0:0:0:0:53:0%:99:1E0:40:53:21:32:54 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:43 0/0:0:0:0:0:49:0%:93:1E0:37:49:21:28:50 0/0:0:0:0:0:45:0%:85:1E0:40:45:18:27:45 0/0:0:0:0:0:49:0%:93:1E0:40:49:20:29:49 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:43 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:41 0/0:0:0:0:0:52:0%:96:1E0:44:52:25:27:54 0/0:0:0:0:0:43:0%:82:1E0:40:43:23:20:45 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:50 0/0:0:0:0:0:42:0%:77:1E0:39:42:15:27:43 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:51:0%:97:1E0:40:51:24:27:52 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:47 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:47 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:37 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:45:0%:85:1E0:43:45:16:29:45 0/1:41:12:6:6:51:23.53%:39:1.1751E-4:46:39:23:16:51 0/0:0:0:0:0:54:0%:99:1E0:40:54:29:25:54 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 MTB_anc 3499869 . C G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|devR_Rv3133c|gene3204|transcript|Transcript_gene3204|Coding|1/1|c.47G>C|p.Gly16Ala|47/654|47/654|16/217||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3499869C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3499869C>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:51 0/0:0:0:0:0:16:0%:29:1E0:49:16:7:9:17 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:51 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:60:1:1:0:41:2.44%:66:5E-1:43:40:16:24:41 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:27 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:32 0/0:0:0:0:0:48:0%:89:1E0:46:48:25:23:48 0/0:0:0:0:0:66:0%:99:1E0:44:66:31:35:68 0/0:0:0:0:0:15:0%:29:1E0:49:15:11:4:17 0/0:0:0:0:0:44:0%:81:1E0:45:44:16:28:46 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:33:0%:63:1E0:51:33:11:22:34 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:47:0%:89:1E0:45:47:19:28:48 0/0:0:0:0:0:26:0%:47:1E0:47:26:8:18:26 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:47 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:49 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:9:24:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:36 0/0:0:0:0:0:57:0%:99:1E0:48:57:32:25:58 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:41 0/0:0:0:0:0:50:0%:92:1E0:45:50:20:30:52 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:43 0/0:0:0:0:0:43:0%:82:1E0:46:43:16:27:43 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:37 0/0:0:0:0:0:23:0%:44:1E0:50:23:17:6:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:43 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:39 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:16 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:48 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:54:0%:99:1E0:44:54:17:37:54 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:46 0/0:0:0:0:0:62:0%:99:1E0:46:62:33:29:63 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:40 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:34 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 0/0:0:0:0:0:33:0%:63:1E0:50:33:21:12:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:35:0%:67:1E0:48:35:14:21:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:33 0/0:0:0:0:0:41:0%:78:1E0:48:41:20:21:42 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:33 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:6:20:26 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:42 0/0:0:0:0:0:29:0%:55:1E0:47:29:8:21:29 0/0:0:0:0:0:58:0%:99:1E0:41:58:29:29:60 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:43 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:30 0/0:0:0:0:0:44:0%:81:1E0:46:44:18:26:45 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:31 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:43 0/0:0:0:0:0:20:0%:36:1E0:46:20:6:14:20 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:22 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:43 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:12:27:39 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:60:1:0:1:31:3.23%:48:5E-1:44:30:14:16:31 0/0:0:0:0:0:53:0%:99:1E0:40:53:23:30:53 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:40:0%:74:1E0:45:40:13:27:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:17:28:46 0/0:0:0:0:0:64:0%:99:1E0:44:64:27:37:64 0/0:0:0:0:0:61:0%:99:1E0:42:61:21:40:62 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:43 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:51 0/0:0:0:0:0:56:0%:99:1E0:39:56:30:26:59 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:35 0/0:0:0:0:0:41:0%:78:1E0:41:41:16:25:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:11:22:33 0/0:0:0:0:0:53:0%:99:1E0:42:53:27:26:56 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:64:0%:99:1E0:39:64:33:31:65 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:14:29:44 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:47 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:41 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:48:0%:89:1E0:46:48:19:29:48 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/1:45:9:5:4:46:19.57%:28:1.2682E-3:42:37:14:23:46 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:45 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:41 MTB_anc 3501681 . C T . PASS AC=2;AF=6.897e-03;AN=290;ANN=T|synonymous_variant|LOW|PPE50_Rv3135|gene3206|transcript|Transcript_gene3206|Coding|1/1|c.348C>T|p.Ala116Ala|348/399|348/399|116/132||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3501681C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3501681C>T||||||;HET=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:49:14:6:8:14 0/0:0:0:0:0:11:0%:22:1E0:47:11:9:2:11 0/0:0:0:0:0:10:0%:17:1E0:39:10:8:2:10 0/0:0:0:0:0:8:0%:14:1E0:43:8:1:7:9 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 0/0:0:0:0:0:13:0%:25:1E0:41:13:4:9:13 0/0:0:0:0:0:12:0%:21:1E0:45:12:8:4:12 0/0:0:0:0:0:11:0%:22:1E0:47:11:6:5:11 0/0:0:0:0:0:15:0%:29:1E0:47:15:7:8:15 0/0:0:0:0:0:14:0%:25:1E0:41:14:7:7:14 0/0:0:0:0:0:7:0%:14:1E0:54:7:3:4:7 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:16 0/0:0:0:0:0:9:0%:18:1E0:50:9:6:3:9 0/0:0:0:0:0:14:0%:25:1E0:45:14:8:6:14 0/0:0:0:0:0:13:0%:25:1E0:45:13:7:6:13 0/0:0:0:0:0:9:0%:18:1E0:42:9:4:5:9 0/0:0:0:0:0:10:0%:17:1E0:42:10:3:7:10 0/0:0:0:0:0:8:0%:14:1E0:54:8:4:4:8 0/0:0:0:0:0:9:0%:18:1E0:40:9:5:4:9 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:13:0%:25:1E0:44:13:6:7:13 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:13:0%:25:1E0:45:13:10:3:13 0/0:0:0:0:0:12:0%:21:1E0:47:12:5:7:12 0/0:0:0:0:0:13:0%:25:1E0:48:13:5:8:13 0/0:0:0:0:0:7:0%:14:1E0:47:7:4:3:7 0/0:0:0:0:0:12:0%:21:1E0:43:12:9:3:12 0/0:0:0:0:0:14:0%:25:1E0:40:14:6:8:14 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:0:0:0:0:9:0%:18:1E0:41:9:5:4:9 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:15:0%:29:1E0:37:15:9:6:15 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:13 0/0:0:0:0:0:13:0%:25:1E0:45:13:7:6:13 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 0/0:0:0:0:0:14:0%:25:1E0:46:14:6:8:14 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:16 0/0:0:0:0:0:10:0%:17:1E0:40:10:3:7:10 0/0:0:0:0:0:16:0%:29:1E0:39:16:5:11:16 0/0:0:0:0:0:9:0%:18:1E0:44:9:4:5:9 0/0:0:0:0:0:14:0%:25:1E0:49:14:7:7:14 0/0:0:0:0:0:12:0%:21:1E0:40:12:6:6:12 0/0:0:0:0:0:11:0%:22:1E0:47:11:1:10:11 0/0:0:0:0:0:7:0%:14:1E0:44:7:5:2:7 0/0:0:0:0:0:12:0%:21:1E0:44:12:5:7:12 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:10 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:15 0/0:0:0:0:0:9:0%:18:1E0:41:9:7:2:9 0/0:0:0:0:0:12:0%:21:1E0:46:12:3:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:39:1:0:1:11:9.09%:14:5E-1:38:10:4:6:12 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:20 0/0:0:0:0:0:13:0%:25:1E0:44:13:3:10:13 0/0:0:0:0:0:8:0%:14:1E0:45:8:3:5:8 0/0:0:0:0:0:13:0%:25:1E0:39:13:9:4:13 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:8:0%:14:1E0:42:8:2:6:8 0/0:0:0:0:0:11:0%:22:1E0:43:11:6:5:11 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:17 0/0:0:0:0:0:13:0%:25:1E0:44:13:4:9:13 0/0:0:0:0:0:14:0%:25:1E0:42:14:7:7:15 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:24 0/0:0:0:0:0:14:0%:25:1E0:40:14:7:7:14 0/0:0:0:0:0:10:0%:17:1E0:41:10:6:4:10 0/0:0:0:0:0:9:0%:18:1E0:47:9:5:4:9 0/0:0:0:0:0:7:0%:14:1E0:47:7:2:5:7 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:15 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:46:14:9:5:14 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:16 0/0:0:0:0:0:17:0%:33:1E0:46:17:5:12:17 0/0:0:0:0:0:9:0%:18:1E0:38:9:3:6:10 0/0:0:0:0:0:14:0%:25:1E0:50:14:7:7:14 0/0:0:0:0:0:12:0%:21:1E0:45:12:5:7:12 0/0:0:0:0:0:11:0%:22:1E0:42:11:7:4:11 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:10 0/0:0:0:0:0:14:0%:25:1E0:37:14:10:4:14 0/0:0:0:0:0:14:0%:25:1E0:41:14:7:7:14 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:9 0/0:0:0:0:0:10:0%:17:1E0:46:10:5:5:10 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:14 0/0:0:0:0:0:12:0%:21:1E0:47:12:6:6:12 0/0:0:0:0:0:9:0%:18:1E0:47:9:6:3:9 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:22 0/0:0:0:0:0:9:0%:18:1E0:46:9:7:2:9 0/0:0:0:0:0:14:0%:25:1E0:42:14:6:8:14 0/0:0:0:0:0:8:0%:14:1E0:48:8:5:3:8 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:22 0/0:37:1:0:1:14:7.14%:17:5E-1:41:13:1:12:14 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:22 0/0:0:0:0:0:13:0%:25:1E0:39:13:7:6:14 0/0:0:0:0:0:8:0%:14:1E0:45:8:4:4:8 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:17 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:10:0%:17:1E0:44:10:5:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:14 0/0:0:0:0:0:18:0%:32:1E0:43:18:6:12:19 0/0:0:0:0:0:15:0%:29:1E0:41:15:9:6:16 0/0:0:0:0:0:10:0%:17:1E0:48:10:6:4:10 0/0:0:0:0:0:11:0%:22:1E0:51:11:7:4:11 0/0:0:0:0:0:9:0%:18:1E0:39:9:7:2:9 0/0:0:0:0:0:10:0%:17:1E0:44:10:6:4:10 0/0:0:0:0:0:14:0%:25:1E0:42:14:6:8:14 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:10 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:0:0:0:0:13:0%:25:1E0:45:13:9:4:13 0/0:0:0:0:0:11:0%:22:1E0:40:11:4:7:11 0/0:0:0:0:0:14:0%:25:1E0:42:14:8:6:14 0/0:0:0:0:0:14:0%:25:1E0:39:14:8:6:15 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:11:0%:22:1E0:35:11:7:4:11 0/0:0:0:0:0:16:0%:29:1E0:39:16:8:8:17 0/0:0:0:0:0:11:0%:22:1E0:41:11:5:6:11 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:23 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:11 0/0:0:0:0:0:7:0%:14:1E0:39:7:2:5:7 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:0:0:0:0:13:0%:25:1E0:42:13:4:9:13 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:22 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:20 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:20 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:19 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:11 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:17 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:17 0/0:0:0:0:0:18:0%:32:1E0:38:18:12:6:18 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 0/0:0:0:0:0:16:0%:29:1E0:42:16:12:4:16 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:15:0%:29:1E0:49:15:3:12:16 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:0:0:0:0:16:0%:29:1E0:41:16:10:6:16 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:19 0/0:0:0:0:0:7:0%:14:1E0:41:7:2:5:7 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:16 0/0:0:0:0:0:10:0%:17:1E0:49:10:5:5:10 0/0:0:0:0:0:13:0%:25:1E0:43:13:9:4:14 0/0:0:0:0:0:10:0%:17:1E0:44:10:6:4:10 0/0:0:0:0:0:12:0%:21:1E0:43:12:6:6:12 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:15:0%:29:1E0:42:15:6:9:15 MTB_anc 3502259 . A C . PASS AC=8;AF=0.027;AN=300;ANN=C|missense_variant|MODERATE|PPE51_Rv3136|gene3207|transcript|Transcript_gene3207|Coding|1/1|c.466A>C|p.Thr156Pro|466/1143|466/1143|156/380||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3502259A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3502259A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:1:0:1:57:1.75%:95:5E-1:40:56:30:26:58 0/0:0:0:0:0:14:0%:25:1E0:44:14:9:5:17 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:15:0%:29:1E0:38:15:12:3:15 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:28 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:22 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:39 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:19 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:36 0/0:0:0:0:0:25:0%:48:1E0:39:25:18:7:26 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:45 0/0:0:0:0:0:16:0%:29:1E0:42:16:5:11:18 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:48 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:31 0/0:0:0:0:0:18:0%:32:1E0:35:18:8:10:19 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:22 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:45 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:38:32:11:21:36 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:37 0/0:0:0:0:0:37:0%:70:1E0:36:37:24:13:44 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:26 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:38 0/0:0:0:0:0:51:0%:97:1E0:39:51:27:24:57 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:34 0/0:0:0:0:0:47:0%:89:1E0:37:47:28:19:50 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:46 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:24 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:37 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:38 0/0:0:0:0:0:39:0%:74:1E0:39:39:25:14:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:36 0/0:0:0:0:0:43:0%:82:1E0:38:43:16:27:44 0/0:0:0:0:0:36:0%:66:1E0:38:36:25:11:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:39 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:16 0/0:0:0:0:0:38:0%:70:1E0:37:38:22:16:43 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:39 0/0:0:0:0:0:43:0%:82:1E0:37:43:23:20:48 0/0:0:0:0:0:37:0%:70:1E0:38:37:21:16:39 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:32 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:36 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:34 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:46 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:39 0/0:0:0:0:0:47:0%:89:1E0:40:47:26:21:50 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:37 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:25 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:41 0/0:0:0:0:0:46:0%:85:1E0:38:46:32:14:47 0/0:0:0:0:0:27:0%:52:1E0:43:27:19:8:36 0/0:0:0:0:0:33:0%:63:1E0:36:33:16:17:37 0/0:0:0:0:0:21:0%:40:1E0:42:21:10:11:26 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:6:16:23 0/0:0:0:0:0:35:0%:67:1E0:36:35:19:16:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:28:13:47 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:35 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:27 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:31 0/0:0:0:0:0:54:0%:99:1E0:39:54:24:30:59 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:27 0/0:0:0:0:0:37:0%:70:1E0:37:37:19:18:40 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:22 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:29 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:26 0/0:0:0:0:0:31:0%:59:1E0:37:31:16:15:33 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:45 0/0:0:0:0:0:17:0%:33:1E0:40:17:4:13:18 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:24 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:17:7:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:29 0/0:0:0:0:0:29:0%:55:1E0:37:29:18:11:32 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:34 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:23:11:12:24:95.83%:99:7.7525E-13:38:1:1:0:24 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:28:0%:51:1E0:37:28:14:14:30 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:24 0/0:0:0:0:0:32:0%:59:1E0:35:32:21:11:44 0/0:0:0:0:0:23:0%:44:1E0:36:23:18:5:25 0/0:0:0:0:0:32:0%:59:1E0:37:32:18:14:34 0/0:0:0:0:0:28:0%:51:1E0:37:28:15:13:31 0/0:0:0:0:0:57:0%:99:1E0:39:57:32:25:60 0/0:0:0:0:0:48:0%:89:1E0:37:48:20:28:53 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:28 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:17 0/0:0:0:0:0:48:0%:89:1E0:37:48:27:21:52 0/0:0:0:0:0:37:0%:70:1E0:38:37:25:12:42 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:40 0/0:0:0:0:0:25:0%:48:1E0:36:25:22:3:29 0/0:0:0:0:0:17:0%:33:1E0:37:17:12:5:25 0/0:0:0:0:0:25:0%:48:1E0:36:25:13:12:29 0/0:0:0:0:0:30:0%:55:1E0:36:30:13:17:33 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:19 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:31 0/0:0:0:0:0:37:0%:70:1E0:38:37:24:13:38 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:35 0/0:0:0:0:0:25:0%:48:1E0:36:25:15:10:26 0/0:0:0:0:0:30:0%:55:1E0:36:30:22:8:32 0/0:0:0:0:0:34:0%:62:1E0:35:34:22:12:43 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:33 0/0:26:1:0:1:35:2.86%:55:5E-1:39:34:15:19:38 0/0:0:0:0:0:29:0%:55:1E0:38:29:22:7:35 0/0:0:0:0:0:40:0%:74:1E0:37:40:22:18:42 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:21 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:29 0/0:0:0:0:0:35:0%:67:1E0:38:35:22:13:38 0/0:0:0:0:0:22:0%:40:1E0:36:22:15:7:23 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:46 0/0:0:0:0:0:40:0%:74:1E0:38:40:23:17:43 0/0:0:0:0:0:45:0%:85:1E0:38:45:36:9:49 0/0:0:0:0:0:40:0%:74:1E0:39:40:27:13:43 MTB_anc 3502602 . TCGGCGAGTTGGTTTCCGCGACCAGTCCCGGCGGTGGGGTGTCTGCGTCGGGTGCCGGCGGTG T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|frameshift_variant|HIGH|PPE51_Rv3136|gene3207|transcript|Transcript_gene3207|Coding|1/1|c.817_878delTTGGTTTCCGCGACCAGTCCCGGCGGTGGGGTGTCTGCGTCGGGTGCCGGCGGTGCGGCGAG|p.Leu273fs|817/1143|817/1143|273/380||INFO_REALIGN_3_PRIME,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3502603_3502664delCGGCGAGTTGGTTTCCGCGACCAGTCCCGGCGGTGGGGTGTCTGCGTCGGGTGCCGGCGGTG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3502603_3502664delCGGCGAGTTGGTTTCCGCGACCAGTCCCGGCGGTGGGGTGTCTGCGTCGGGTGCCGGCGGTG||||||;HOM=0;LOF=(PPE51_Rv3136|gene3207|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:57 0/0:0:0:0:0:23:0%:44:1E0:47:23:17:6:23 0/0:0:0:0:0:54:0%:99:1E0:43:54:30:24:54 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:28:11:40 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:35:0%:67:1E0:51:35:16:19:35 0/0:0:0:0:0:24:0%:44:1E0:43:24:18:6:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:24 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:32 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:22:0%:40:1E0:52:22:4:18:23 0/0:0:0:0:0:46:0%:85:1E0:44:46:31:15:46 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:39 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:21:8:30 0/0:0:0:0:0:18:0%:32:1E0:46:18:13:5:19 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:55:0%:99:1E0:43:55:35:20:56 0/0:0:0:0:0:34:0%:62:1E0:49:34:20:14:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:32:1:1:0:33:3.03%:52:5E-1:45:32:18:14:33 0/0:0:0:0:0:24:0%:44:1E0:50:24:15:9:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:21:10:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:25:10:35 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:48 0/0:0:0:0:0:53:0%:99:1E0:48:53:35:18:54 0/0:0:0:0:0:45:0%:85:1E0:44:45:32:13:45 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:25:14:41 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:27:8:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:22:4:26 0/0:0:0:0:0:39:0%:74:1E0:42:39:25:14:40 0/0:0:0:0:0:44:0%:81:1E0:44:44:28:16:45 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:16:0%:29:1E0:45:16:9:7:16 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:47:0%:89:1E0:41:47:31:16:49 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:43 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:24:11:35 0/0:0:0:0:0:31:0%:59:1E0:50:31:18:13:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:43 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:54 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:21 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:51:0%:97:1E0:43:51:29:22:52 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:44:0%:81:1E0:46:44:26:18:47 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:49:32:21:11:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:44 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:18 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:21 0/0:0:0:0:0:22:0%:40:1E0:43:22:17:5:23 0/0:0:0:0:0:54:0%:99:1E0:42:54:31:23:55 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:38 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:41:0%:78:1E0:46:41:28:13:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:34 0/0:0:0:0:0:20:0%:36:1E0:52:20:11:9:20 0/0:0:0:0:0:40:0%:74:1E0:45:40:25:15:40 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:40:0%:74:1E0:49:40:26:14:41 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:47:0%:89:1E0:41:47:33:14:47 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:20:6:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:24:6:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:35 0/0:0:0:0:0:17:0%:33:1E0:41:17:9:8:17 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:26 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:22:10:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:27 0/0:0:0:0:0:42:0%:77:1E0:42:42:32:10:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:40 0/0:0:0:0:0:55:0%:99:1E0:43:55:34:21:59 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:23:14:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:60:0%:99:1E0:41:60:32:28:61 0/0:0:0:0:0:43:0%:82:1E0:38:43:29:14:45 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:25 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:47 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:34 0/0:0:0:0:0:50:0%:92:1E0:40:50:30:20:52 0/0:0:0:0:0:39:0%:74:1E0:39:39:24:15:40 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:44 0/1:48:14:9:5:24:58.33%:53:4.0663E-6:38:10:7:3:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/1:39:19:11:8:25:70.37%:79:1.2089E-8:39:8:6:2:28 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:46 0/0:0:0:0:0:27:0%:52:1E0:41:27:18:9:27 0/0:0:0:0:0:43:0%:82:1E0:41:43:31:12:44 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:41 0/0:0:0:0:0:53:0%:99:1E0:39:53:28:25:55 0/0:0:0:0:0:40:0%:74:1E0:47:40:27:13:42 0/0:0:0:0:0:40:0%:74:1E0:39:40:30:10:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:25:11:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:33 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:19 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:23:12:37 0/0:0:0:0:0:61:0%:99:1E0:42:61:36:25:64 0/0:0:0:0:0:38:0%:70:1E0:40:38:27:11:40 MTB_anc 3503781 . G A . PASS AC=16;AF=0.053;AN=300;ANN=A|missense_variant|MODERATE|Rv3137_Rv3137|gene3209|transcript|Transcript_gene3209|Coding|1/1|c.389G>A|p.Arg130Gln|389/783|389/783|130/260||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3503781G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3503781G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:37:42:11:31:45 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:12 0/0:0:0:0:0:32:0%:59:1E0:36:32:15:17:36 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:34 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:23 0/0:0:0:0:0:19:0%:37:1E0:39:19:6:13:20 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:30 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:19 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:27 0/0:35:1:1:0:22:4.55%:31:5E-1:38:21:7:14:23 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:29 0/0:0:0:0:0:13:0%:25:1E0:40:13:6:7:14 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:28 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:20:0%:36:1E0:38:20:5:15:21 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:14 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:27 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:13 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:4:16:20 0/0:0:0:0:0:47:0%:89:1E0:37:47:22:25:49 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:19 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:29 0/0:37:1:0:1:23:4.35%:34:5E-1:38:22:13:9:23 0/0:0:0:0:0:16:0%:29:1E0:44:16:9:7:17 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:21 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:30 0/0:0:0:0:0:8:0%:14:1E0:34:8:2:6:12 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:25 0/0:0:0:0:0:27:0%:52:1E0:36:27:13:14:29 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:31 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:31 0/0:0:0:0:0:24:0%:44:1E0:39:24:6:18:25 0/0:0:0:0:0:37:0%:70:1E0:38:37:16:21:37 0/0:0:0:0:0:40:0%:74:1E0:38:40:20:20:41 0/0:0:0:0:0:35:0%:67:1E0:38:35:13:22:36 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:29 0/0:0:0:0:0:34:0%:62:1E0:36:34:16:18:37 0/0:38:1:0:1:28:3.57%:41:5E-1:36:27:12:15:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:22:0%:40:1E0:38:22:8:14:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:29 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:34 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:28 0/0:0:0:0:0:16:0%:29:1E0:37:16:8:8:19 0/0:0:0:0:0:41:0%:78:1E0:39:41:14:27:44 0/0:0:0:0:0:39:0%:74:1E0:38:39:16:23:41 0/0:0:0:0:0:25:0%:48:1E0:36:25:11:14:26 0/0:0:0:0:0:15:0%:29:1E0:39:15:4:11:17 0/0:0:0:0:0:44:0%:81:1E0:37:44:10:34:44 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:28 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:22 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:7:16:25 0/0:38:1:1:0:31:3.23%:48:5E-1:37:30:11:19:32 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:32 0/0:60:1:1:0:28:3.57%:41:5E-1:38:27:12:15:30 0/0:0:0:0:0:36:0%:66:1E0:37:36:13:23:37 0/0:0:0:0:0:30:0%:55:1E0:37:30:12:18:30 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:17 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:25 0/0:0:0:0:0:44:0%:81:1E0:38:44:23:21:44 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:22 0/0:0:0:0:0:24:0%:44:1E0:38:24:12:12:26 0/0:0:0:0:0:16:0%:29:1E0:38:16:4:12:18 0/0:37:1:0:1:14:7.14%:17:5E-1:42:13:4:9:15 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:27 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:21 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:16 0/0:0:0:0:0:37:0%:70:1E0:38:37:12:25:38 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:21 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:8:15:25 0/0:0:0:0:0:30:0%:55:1E0:37:30:4:26:32 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:16 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:21 0/0:0:0:0:0:33:0%:63:1E0:38:33:11:22:34 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:30 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:25 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:28 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:15:0%:29:1E0:35:15:4:11:16 0/0:0:0:0:0:17:0%:33:1E0:37:17:2:15:20 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:23 0/0:0:0:0:0:50:0%:92:1E0:37:50:23:27:50 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:30 0/0:0:0:0:0:49:0%:93:1E0:35:49:14:35:51 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:22 0/0:0:0:0:0:25:0%:48:1E0:35:25:6:19:26 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:25 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:22 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:20 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:26 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:24 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:19 0/0:0:0:0:0:20:0%:36:1E0:35:20:3:17:20 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:29 0/0:0:0:0:0:33:0%:63:1E0:37:33:12:21:36 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:16:0%:29:1E0:34:16:5:11:16 1/1:38:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:17 0/0:0:0:0:0:32:0%:59:1E0:35:32:18:14:32 0/0:0:0:0:0:18:0%:32:1E0:36:18:3:15:19 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:22 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:12 0/0:0:0:0:0:41:0%:78:1E0:38:41:21:20:42 0/0:0:0:0:0:44:0%:81:1E0:36:44:14:30:47 1/1:36:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:26 0/0:0:0:0:0:17:0%:33:1E0:35:17:5:12:19 0/0:0:0:0:0:33:0%:63:1E0:37:33:7:26:35 0/0:0:0:0:0:20:0%:36:1E0:35:20:9:11:21 0/0:0:0:0:0:31:0%:59:1E0:35:31:14:17:33 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:26 1/1:35:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:35:0%:67:1E0:36:35:12:23:37 0/0:0:0:0:0:26:0%:47:1E0:36:26:9:17:27 0/0:0:0:0:0:25:0%:48:1E0:35:25:6:19:28 0/0:0:0:0:0:16:0%:29:1E0:35:16:5:11:18 0/0:38:1:1:0:31:3.23%:48:5E-1:37:30:11:19:32 0/0:0:0:0:0:48:0%:89:1E0:37:48:13:35:51 0/0:37:1:1:0:22:4.55%:31:5E-1:37:21:6:15:22 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:38 0/0:0:0:0:0:33:0%:63:1E0:37:33:9:24:35 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:31 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:10:18:31 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:29 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:30 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:16 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:21 0/0:0:0:0:0:33:0%:63:1E0:38:33:16:17:34 0/0:0:0:0:0:41:0%:78:1E0:36:41:11:30:45 0/0:0:0:0:0:17:0%:33:1E0:36:17:4:13:17 MTB_anc 3505005 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|pflA_Rv3138|gene3210|transcript|Transcript_gene3210|Coding|1/1|c.811C>A|p.Pro271Thr|811/1089|811/1089|271/362||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3505005C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3505005C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:39:19:20:40:97.5%:99:3.6742E-23:0:0:0:0:42 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:38:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:48 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:38:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:28 1/1:40:44:12:32:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:37:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:38:37:19:18:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:17:8:26:96.15%:99:7.9107E-15:0:0:0:0:28 1/1:36:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:36:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:27:12:15:28:96.43%:99:5.1363E-16:0:0:0:0:30 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:35:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:46:23:23:47:97.87%:99:2.9526E-26:29:1:0:1:50 1/1:38:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:36:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:36:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:48:19:29:48:100%:99:1.554E-28:0:0:0:0:51 1/1:36:48:21:27:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:36:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:46 1/1:38:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:52 1/1:37:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:37:45:21:24:46:97.83%:99:1.1441E-25:26:1:0:1:47 1/1:37:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:66 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:40 1/1:35:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 3506481 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|fadE24_Rv3139|gene3211|transcript|Transcript_gene3211|Coding|1/1|c.1119G>A|p.Glu373Glu|1119/1407|1119/1407|373/468||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3506481G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3506481G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:63:0%:99:1E0:42:63:34:29:63 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:23 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:48 0/0:0:0:0:0:13:0%:25:1E0:41:13:5:8:14 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:34 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:23 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:22:0%:40:1E0:50:22:14:8:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:36 0/0:0:0:0:0:51:0%:97:1E0:40:51:31:20:51 0/0:0:0:0:0:19:0%:37:1E0:44:19:7:12:19 0/0:0:0:0:0:49:0%:93:1E0:43:49:26:23:52 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:39 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:19 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:31 0/0:0:0:0:0:18:0%:32:1E0:43:18:9:9:20 0/0:0:0:0:0:24:0%:44:1E0:53:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:36 0/0:0:0:0:0:56:0%:99:1E0:41:56:25:31:57 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:16:0%:29:1E0:52:16:8:8:16 0/0:0:0:0:0:24:0%:44:1E0:48:24:18:6:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:60:1:1:0:23:4.35%:34:5E-1:43:22:12:10:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:60:0%:99:1E0:44:60:29:31:61 0/0:0:0:0:0:39:0%:74:1E0:44:39:24:15:40 0/0:0:0:0:0:54:0%:99:1E0:43:54:37:17:57 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:21 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:45:0%:85:1E0:40:45:29:16:46 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:51 0/0:0:0:0:0:57:0%:99:1E0:40:57:29:28:57 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:16:0%:29:1E0:50:16:8:8:17 0/0:0:0:0:0:56:0%:99:1E0:41:56:26:30:56 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:29 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:30 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:55 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:41 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:54:0%:99:1E0:42:54:27:27:54 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:46:0%:85:1E0:47:46:33:13:46 0/0:0:0:0:0:51:0%:97:1E0:44:51:21:30:54 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:17 0/0:0:0:0:0:16:0%:29:1E0:46:16:11:5:16 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:45 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:38:0%:70:1E0:51:38:20:18:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:43 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:35:0%:67:1E0:39:35:23:12:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:42 0/0:0:0:0:0:15:0%:29:1E0:42:15:6:9:15 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:43 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:37 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:37 0/0:0:0:0:0:36:0%:66:1E0:39:36:11:25:36 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:15 0/0:60:1:0:1:52:1.92%:83:5E-1:43:51:26:25:52 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:3:18:21 0/0:0:0:0:0:56:0%:99:1E0:42:56:31:25:58 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:42:0%:77:1E0:42:42:16:26:42 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:26 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:39 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:34 0/0:0:0:0:0:26:0%:47:1E0:37:26:7:19:28 0/0:0:0:0:0:13:0%:25:1E0:38:13:8:5:14 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:34 1/1:45:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:24 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:48 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:21 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:50 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:45 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:24 0/0:0:0:0:0:35:0%:67:1E0:37:35:17:18:37 0/0:0:0:0:0:38:0%:70:1E0:36:38:22:16:38 0/0:0:0:0:0:48:0%:89:1E0:39:48:23:25:50 0/0:0:0:0:0:33:0%:63:1E0:37:33:12:21:34 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:43 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:44 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:32 0/0:0:0:0:0:48:0%:89:1E0:38:48:25:23:49 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:36 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:42 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:53:0%:99:1E0:36:53:19:34:53 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:44 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:42 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:46 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:49 0/0:0:0:0:0:50:0%:92:1E0:39:50:19:31:50 0/0:0:0:0:0:43:0%:82:1E0:40:43:22:21:44 MTB_anc 3509091 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|fadB4_Rv3141-Rv3142c_Rv3142c|gene3213-gene3214|intergenic_region|gene3213-gene3214|||n.3509091C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:46:39:22:17:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:54:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:50 1/1:48:28:11:17:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:50:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:53:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:60 1/1:42:60:34:26:60:100%:99:1.035E-35:0:0:0:0:63 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:60 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:60:28:32:60:100%:99:1.035E-35:0:0:0:0:65 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:50 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:75:38:37:75:100%:99:1.0773E-44:0:0:0:0:78 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:38:22:16:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:18:13:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:67:36:31:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:38:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 MTB_anc 3510120 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE52_Rv3144c|gene3216|transcript|Transcript_gene3216|Coding|1/1|c.1198C>A|p.Gln400Lys|1198/1230|1198/1230|400/409||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3510120G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3510120G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:53:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:13:16:31:93.55%:99:1.1344E-15:49:2:1:1:32 1/1:48:28:14:14:29:96.55%:99:9.9776E-16:39:1:0:1:29 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:49:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:51:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:51:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:48:27:21:48:100%:99:1.554E-28:0:0:0:0:52 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:45:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:53:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 MTB_anc 3511736 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|nuoA_Rv3145|gene3217|transcript|Transcript_gene3217|Coding|1/1|c.55G>A|p.Val19Met|55/387|55/387|19/128||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3511736G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3511736G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:39 0/0:0:0:0:0:19:0%:37:1E0:52:19:8:11:19 0/0:0:0:0:0:62:0%:99:1E0:44:62:27:35:63 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:39:0%:74:1E0:47:39:19:20:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:36 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:31 0/0:0:0:0:0:49:0%:93:1E0:46:49:28:21:51 0/0:0:0:0:0:14:0%:25:1E0:47:14:7:7:14 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:43 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:23 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:19 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:60:0%:99:1E0:42:60:29:31:63 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:28 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:19:0%:37:1E0:49:19:10:9:19 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:38:1:1:0:32:3.12%:48:5E-1:43:31:17:14:32 0/0:0:0:0:0:35:0%:67:1E0:46:35:13:22:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:31 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:65:0%:99:1E0:49:65:32:33:66 0/0:0:0:0:0:34:0%:62:1E0:48:34:24:10:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:24:13:39 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:45 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:43 0/0:0:0:0:0:22:0%:40:1E0:40:22:7:15:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:41 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:38 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:16:0%:29:1E0:45:16:12:4:17 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:42 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:37:32:15:17:32 0/0:0:0:0:0:43:0%:82:1E0:39:43:14:29:43 0/0:0:0:0:0:34:0%:62:1E0:37:34:11:23:36 0/0:0:0:0:0:22:0%:40:1E0:49:22:16:6:23 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:45 0/0:0:0:0:0:34:0%:62:1E0:48:34:21:13:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:47 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:48 0/0:0:0:0:0:50:0%:92:1E0:43:50:23:27:50 0/0:34:1:1:0:39:2.56%:62:5E-1:43:38:19:19:39 0/0:33:1:1:0:42:2.38%:66:5E-1:44:41:24:17:44 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:31 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:50:0%:92:1E0:43:50:24:26:52 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:43 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:46 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:14:22:37 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:36 0/0:0:0:0:0:17:0%:33:1E0:48:17:12:5:17 0/0:0:0:0:0:27:0%:52:1E0:48:27:8:19:27 0/0:0:0:0:0:27:0%:52:1E0:48:27:12:15:28 0/0:0:0:0:0:46:0%:85:1E0:38:46:24:22:47 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:37 0/0:60:1:0:1:49:2.04%:80:5E-1:43:48:22:26:49 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:38 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:43 0/0:0:0:0:0:31:0%:59:1E0:46:31:22:9:33 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:38 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 1/1:38:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:45 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:43 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:31 0/0:0:0:0:0:63:0%:99:1E0:41:63:35:28:63 0/0:0:0:0:0:62:0%:99:1E0:40:62:32:30:62 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:24 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:36 0/0:0:0:0:0:47:0%:89:1E0:38:47:22:25:48 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:26 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:45 0/0:0:0:0:0:33:0%:63:1E0:35:33:12:21:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:41 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:25 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:44 0/0:0:0:0:0:41:0%:78:1E0:38:41:16:25:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:72:0%:99:1E0:38:72:30:42:73 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:46 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:46 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:50 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:44 0/0:0:0:0:0:43:0%:82:1E0:39:43:25:18:43 MTB_anc 3521044 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|nuoI_Rv3153|gene3225|transcript|Transcript_gene3225|Coding|1/1|c.538G>A|p.Ala180Thr|538/636|538/636|180/211||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3521044G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3521044G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:62:36:26:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:28 1/1:46:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:34:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:37:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:47 1/1:36:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:34:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:38 1/1:36:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:41 1/1:36:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:36:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:35:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:35:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:53 1/1:38:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:36:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:35 MTB_anc 3525411 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|nuoM_Rv3157|gene3229|transcript|Transcript_gene3229|Coding|1/1|c.1280C>T|p.Pro427Leu|1280/1662|1280/1662|427/553||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3525411C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3525411C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:27 0/0:0:0:0:0:39:0%:74:1E0:49:39:19:20:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:36 0/0:0:0:0:0:27:0%:52:1E0:47:27:18:9:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:21:9:32 0/0:0:0:0:0:33:0%:63:1E0:49:33:13:20:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:42 0/0:0:0:0:0:18:0%:32:1E0:48:18:6:12:18 0/0:0:0:0:0:49:0%:93:1E0:42:49:24:25:50 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:26 0/0:0:0:0:0:54:0%:99:1E0:42:54:26:28:58 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:27 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:46 0/0:0:0:0:0:30:0%:55:1E0:48:30:11:19:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:46:0%:85:1E0:43:46:29:17:46 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:41 0/0:0:0:0:0:31:0%:59:1E0:46:31:21:10:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:70:0%:99:1E0:45:70:36:34:70 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:46 0/0:0:0:0:0:47:0%:89:1E0:45:47:18:29:49 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:38 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:43 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:35 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:60:0%:99:1E0:41:60:30:30:61 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:31 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:12:22:34 0/0:38:1:0:1:35:2.86%:55:5E-1:42:34:15:19:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:50 0/0:0:0:0:0:65:0%:99:1E0:42:65:30:35:65 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:21 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:30 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:8:19:28 0/0:38:1:1:0:27:3.7%:41:5E-1:47:26:12:14:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:39 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:34 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:25 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:36 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:35 0/0:0:0:0:0:51:0%:97:1E0:41:51:30:21:53 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:13:24:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:34 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:6:19:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:30 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:29 0/0:0:0:0:0:50:0%:92:1E0:44:50:22:28:52 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:33 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:48 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:28 1/1:41:33:15:18:34:97.06%:99:1.2301E-18:37:1:1:0:36 0/0:0:0:0:0:30:0%:55:1E0:38:30:11:19:34 0/0:0:0:0:0:56:0%:99:1E0:44:56:30:26:56 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:49:0%:93:1E0:36:49:17:32:55 0/0:0:0:0:0:44:0%:81:1E0:35:44:16:28:47 0/0:0:0:0:0:48:0%:89:1E0:38:48:24:24:55 0/0:0:0:0:0:31:0%:59:1E0:37:31:11:20:33 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:41 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:37 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:32 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:37 0/0:0:0:0:0:31:0%:59:1E0:39:31:10:21:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:12:24:37 0/0:0:0:0:0:38:0%:70:1E0:38:38:15:23:38 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:23 0/0:60:1:0:1:61:1.64%:99:5E-1:37:60:19:41:65 0/0:0:0:0:0:36:0%:66:1E0:38:36:11:25:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:36 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:15:26:41 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:48 0/0:0:0:0:0:52:0%:96:1E0:43:52:35:17:57 0/0:0:0:0:0:60:0%:99:1E0:40:60:28:32:60 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 MTB_anc 3528971 . TCGC T . PASS AC=131;AF=0.437;AN=300;ANN=T|inframe_deletion|MODERATE|PPE53_Rv3159c|gene3231|transcript|Transcript_gene3231|Coding|1/1|c.190_192delGCG|p.Ala64del|192/1773|190/1773|64/590||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3528972_3528974delCGC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3528972_3528974delCGC||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:18:13:5:40:42.86%:64:3.7193E-7:41:24:8:16:44 0/1:46:14:9:5:27:51.85%:52:6.1806E-6:41:13:7:6:28 0/0:0:0:0:0:75:0%:99:1E0:40:75:32:43:77 0/1:44:10:6:4:23:40%:34:3.1821E-4:39:15:9:6:25 0/1:42:23:14:9:44:51.11%:85:2.6125E-9:41:22:12:10:50 0/1:38:16:7:9:39:40%:56:2.3315E-6:41:24:14:10:41 0/1:44:16:11:5:40:40%:56:2.3315E-6:40:24:14:10:41 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:44 0/1:41:24:13:11:51:47.06%:87:1.6778E-9:40:27:21:6:53 0/1:40:20:9:11:39:51.28%:74:3.4806E-8:40:19:13:6:40 0/1:42:18:9:9:37:47.37%:65:2.68E-7:42:20:8:12:39 0/1:38:28:16:12:60:46.67%:99:5.88E-11:37:32:18:14:62 0/1:39:19:14:5:36:50%:70:9.2415E-8:43:19:7:12:39 0/1:42:30:16:14:63:47.62%:99:9.545E-12:41:33:15:18:70 0/1:37:29:19:10:46:61.7%:99:3.0639E-12:37:18:9:9:49 0/1:40:15:8:7:39:36.59%:51:6.364E-6:40:26:12:14:43 0/1:46:19:8:11:38:50%:70:9.2415E-8:39:19:13:6:38 0/1:36:19:8:11:36:51.35%:70:8.2514E-8:37:18:8:10:38 0/1:43:17:7:10:35:48.57%:62:5.7598E-7:40:18:7:11:36 0/1:40:17:9:8:35:48.57%:62:5.7598E-7:43:18:9:9:37 0/1:38:20:10:10:46:42.55%:71:7.2254E-8:39:27:13:14:51 0/1:37:24:15:9:70:34.29%:82:5.4869E-9:39:46:31:15:70 0/1:45:15:8:7:33:45.45%:54:3.8647E-6:39:18:8:10:36 0/1:37:31:12:19:47:57.41%:99:9.7868E-13:40:23:12:11:56 0/1:41:26:11:15:50:50%:96:2.1991E-10:39:26:11:15:56 0/1:43:26:18:8:57:43.33%:93:4.5813E-10:41:34:18:16:61 0/1:44:19:7:12:47:40.43%:67:1.9354E-7:39:28:13:15:49 0/1:38:18:6:12:52:33.96%:61:6.6943E-7:41:35:16:19:58 0/1:41:22:9:13:48:45.83%:79:1.0268E-8:42:26:15:11:49 0/1:37:23:11:12:41:51.11%:85:2.6125E-9:38:22:13:9:46 0/1:35:14:8:6:52:26.42%:46:2.2741E-5:38:39:22:17:56 0/1:35:16:8:8:43:36.36%:55:2.8784E-6:39:28:7:21:44 0/0:0:0:0:0:49:0%:93:1E0:41:49:31:18:54 0/1:33:19:9:10:43:39.58%:66:2.0555E-7:39:29:14:15:50 0/1:42:29:6:23:50:56.86%:99:6.4161E-12:39:22:11:11:57 0/1:40:33:15:18:65:50%:99:5.2318E-13:37:33:17:16:69 0/1:41:18:11:7:46:40%:63:4.5278E-7:39:27:15:12:48 0/1:41:41:19:22:82:48.24%:99:7.2639E-16:41:44:17:27:89 0/0:0:0:0:0:66:0%:99:1E0:40:66:32:34:70 0/1:41:27:13:14:61:42.86%:96:2.0968E-10:43:36:23:13:66 0/1:37:27:12:15:53:49.09%:99:1.0345E-10:38:28:13:15:56 0/1:40:29:13:16:66:43.28%:99:3.7837E-11:39:38:21:17:68 0/1:35:20:11:9:41:46.51%:72:5.2508E-8:37:23:16:7:45 0/1:43:18:12:6:50:36%:62:5.8874E-7:43:32:12:20:52 0/1:41:32:17:15:62:50.79%:99:1.1052E-12:39:31:19:12:67 0/1:35:40:16:24:68:55.56%:99:4.3182E-16:38:32:12:20:76 0/1:39:12:10:2:30:40%:42:6.1809E-5:41:18:11:7:33 0/1:43:33:13:20:66:50%:99:5.2318E-13:36:33:17:16:69 0/1:38:31:16:15:57:52.54%:99:2.0466E-12:40:28:17:11:59 0/1:43:20:15:5:52:39.22%:70:9.3266E-8:41:31:18:13:55 0/1:41:17:5:12:29:56.67%:65:3.0928E-7:44:13:5:8:33 0/1:39:19:8:11:51:36.54%:65:2.5408E-7:37:33:20:13:54 0/1:39:13:3:10:29:43.33%:46:2.3178E-5:43:17:8:9:34 0/1:42:19:7:12:51:36.54%:65:2.5408E-7:39:33:18:15:54 0/1:38:23:14:9:44:51.11%:85:2.6125E-9:39:22:10:12:45 0/1:39:21:15:6:51:41.18%:74:3.5259E-8:39:30:13:17:52 0/1:38:12:8:4:36:33.33%:40:8.1472E-5:38:24:12:12:39 0/1:41:20:10:10:48:42.55%:71:7.2254E-8:41:27:15:12:49 0/1:37:32:15:17:49:62.75%:99:1.5887E-13:37:19:7:12:54 0/1:38:25:11:14:53:46.3%:91:7.7765E-10:39:29:12:17:61 0/1:39:22:10:12:35:59.46%:85:2.5665E-9:36:15:6:9:38 0/1:41:27:11:16:59:44.26%:97:1.7985E-10:37:34:16:18:61 0/1:38:28:17:11:50:54.9%:99:2.0643E-11:41:23:13:10:53 0/1:39:17:9:8:44:38.64%:59:1.1194E-6:40:27:15:12:45 0/1:39:30:16:14:72:41.1%:99:2.1366E-11:41:43:21:22:74 0/1:39:34:11:23:73:45.33%:99:4.4044E-13:41:41:21:20:78 0/1:42:23:13:10:48:47.92%:84:3.6075E-9:42:25:10:15:51 0/1:41:34:14:20:77:42.5%:99:6.5441E-13:40:46:23:23:84 0/1:44:15:11:4:38:39.47%:52:5.4463E-6:40:23:12:11:39 0/0:40:6:4:2:22:27.27%:9:1.057E-2:43:16:7:9:23 0/1:39:25:15:10:53:46.3%:91:7.7765E-10:43:29:14:15:58 0/1:48:18:8:10:46:39.13%:63:4.7997E-7:43:28:15:13:47 0/1:45:15:9:6:40:37.5%:52:6.0618E-6:43:25:15:10:41 0/1:43:29:20:9:63:44.62%:99:3.2317E-11:43:36:19:17:66 0/1:37:35:21:14:62:55.56%:99:3.7062E-14:39:28:18:10:66 0/1:38:19:8:11:46:42.22%:67:1.6979E-7:41:26:11:15:49 0/1:36:32:12:20:52:57.14%:99:3.5017E-13:39:23:14:9:58 0/1:44:30:11:19:63:46.15%:99:1.1519E-11:42:35:20:15:66 0/0:0:0:0:0:57:0%:99:1E0:40:57:25:32:60 0/1:43:10:5:5:26:38.46%:34:3.3576E-4:41:16:9:7:28 0/1:36:23:15:8:44:51.11%:85:2.6125E-9:36:22:12:10:48 0/1:31:16:7:9:44:34.04%:54:3.2755E-6:41:31:20:11:50 0/1:36:20:9:11:52:37.04%:69:1.0405E-7:40:33:19:14:56 0/0:37:1:1:0:48:2.08%:76:5E-1:42:47:17:30:51 0/1:39:15:9:6:42:34.09%:51:7.2456E-6:39:29:16:13:47 0/1:44:19:8:11:38:50%:70:9.2415E-8:37:19:9:10:41 0/1:48:21:5:16:49:42.86%:75:2.8521E-8:39:27:17:10:51 0/1:38:12:4:8:28:41.38%:42:5.8193E-5:40:17:11:6:32 0/1:39:24:8:16:61:38.1%:84:3.9394E-9:41:39:15:24:65 0/1:41:24:6:18:54:43.64%:86:2.3553E-9:42:31:14:17:57 0/1:40:25:10:15:47:50%:92:5.2124E-10:39:25:8:17:50 0/1:45:14:7:7:34:41.18%:49:1.1295E-5:44:20:9:11:34 0/1:41:39:21:18:72:54.17%:99:1.374E-15:40:33:21:12:78 0/1:42:21:9:12:46:44.68%:75:2.6363E-8:41:26:12:14:48 0/1:41:31:15:16:69:44.29%:99:6.2985E-12:39:39:17:22:71 0/1:39:16:7:9:47:34.04%:54:3.2755E-6:38:31:20:11:49 0/1:40:16:10:6:39:41.03%:56:2.1927E-6:37:23:13:10:43 0/1:40:26:14:12:51:50.98%:97:1.9611E-10:38:25:13:12:52 0/1:40:16:13:3:44:36.36%:55:2.8784E-6:37:28:13:15:47 0/1:38:26:15:11:61:42.62%:93:4.9329E-10:39:35:16:19:62 0/1:38:26:9:17:59:43.33%:93:4.5813E-10:40:34:18:16:63 0/1:39:28:18:10:66:42.42%:99:9.5854E-11:39:38:20:18:69 0/1:33:23:7:16:46:46.94%:84:3.9694E-9:38:26:14:12:50 0/1:35:17:9:8:39:42.5%:60:8.743E-7:36:23:13:10:42 0/0:0:0:0:0:35:0%:67:1E0:36:35:18:17:38 0/1:40:31:14:17:55:53.45%:99:1.7922E-12:39:27:15:12:59 0/1:37:28:17:11:57:49.12%:99:4.3658E-11:37:29:13:16:59 0/1:38:27:16:11:56:45.76%:98:1.5211E-10:41:32:17:15:60 0/1:41:26:17:9:50:50.98%:97:1.9611E-10:38:25:13:12:52 0/1:36:36:18:18:69:51.43%:99:3.104E-14:40:34:16:18:71 0/1:41:18:9:9:41:43.9%:64:3.454E-7:41:23:11:12:42 0/1:35:23:11:12:50:43.4%:82:5.1348E-9:38:29:10:19:57 0/0:0:0:0:0:37:0%:70:1E0:37:37:18:19:41 0/1:40:20:10:10:54:37.04%:69:1.0949E-7:38:34:11:23:54 0/0:0:0:0:0:49:0%:89:1E0:36:48:30:18:57 0/0:0:0:0:0:55:0%:99:1E0:38:55:33:22:63 0/1:34:23:9:14:52:42.59%:82:5.9704E-9:37:31:20:11:56 0/1:39:27:12:15:48:52.94%:99:6.451E-11:38:24:13:11:51 0/1:36:30:17:13:43:66.67%:99:5.1233E-13:37:15:12:3:45 0/1:42:24:11:13:50:47.06%:87:1.6778E-9:39:27:13:14:52 0/1:42:27:14:13:63:42.19%:96:2.2534E-10:37:37:28:9:67 0/1:34:25:7:18:54:44.64%:90:9.2302E-10:39:31:16:15:57 0/1:31:16:6:10:30:50%:59:1.2304E-6:36:16:11:5:32 0/1:32:12:6:6:24:46.15%:43:4.6796E-5:34:14:7:7:28 0/1:34:12:2:10:30:38.71%:41:6.5329E-5:39:19:11:8:34 0/0:0:0:0:0:29:0%:55:1E0:38:29:20:9:34 0/0:0:0:0:0:30:0%:55:1E0:35:30:18:12:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:34 0/1:39:19:10:9:34:54.29%:71:6.3952E-8:35:16:10:6:37 0/1:29:16:9:7:27:50%:59:1.2304E-6:39:16:8:8:32 0/1:34:18:10:8:33:51.43%:67:1.9562E-7:39:17:7:10:37 0/1:36:19:9:10:38:50%:70:9.2415E-8:34:19:6:13:39 0/0:0:0:0:0:17:0%:33:1E0:34:17:12:5:18 0/1:37:11:5:6:23:45.83%:39:1.1047E-4:36:13:9:4:25 0/1:36:18:12:6:31:58.06%:69:1.1154E-7:37:13:6:7:31 0/1:41:25:17:8:44:55.56%:95:2.7295E-10:37:20:8:12:45 0/1:35:43:22:21:80:51.81%:99:6.5235E-17:35:40:28:12:86 0/1:36:26:14:12:59:42.62%:93:4.9329E-10:38:35:19:16:61 0/1:40:32:24:8:55:58.18%:99:3.5017E-13:38:23:12:11:58 0/1:38:23:12:11:54:41.82%:81:6.4034E-9:38:32:19:13:60 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:54 0/1:37:14:5:9:33:42.42%:49:1.0577E-5:40:19:9:10:35 0/1:37:17:8:9:31:51.52%:63:4.6376E-7:40:16:10:6:34 0/0:0:0:0:0:40:0%:74:1E0:38:40:16:24:46 0/0:0:0:0:0:52:0%:96:1E0:38:52:25:27:54 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:28 0/1:39:25:17:8:44:55.56%:95:2.7295E-10:40:20:11:9:47 0/1:41:29:9:20:52:53.7%:99:1.0051E-11:40:25:11:14:57 0/1:37:30:12:18:64:44.12%:99:1.4855E-11:40:38:26:12:70 0/1:39:25:18:7:52:48.08%:91:6.4344E-10:37:27:20:7:54 MTB_anc 3529067 . C G . PASS AC=119;AF=0.397;AN=300;ANN=G|missense_variant|MODERATE|PPE53_Rv3159c|gene3231|transcript|Transcript_gene3231|Coding|1/1|c.97G>C|p.Gly33Arg|97/1773|97/1773|33/590||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3529067C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3529067C>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:21:14:7:47:44.68%:75:2.6363E-8:41:26:12:14:48 0/1:53:13:6:7:34:38.24%:45:2.9583E-5:46:21:8:13:35 0/0:33:1:1:0:79:1.27%:99:5E-1:44:78:34:44:80 0/1:49:13:8:5:35:37.14%:45:3.1103E-5:48:22:12:10:35 0/1:44:20:8:12:47:42.55%:71:7.2254E-8:45:27:11:16:48 0/1:40:12:5:7:38:31.58%:40:8.7276E-5:44:26:11:15:39 0/1:48:14:9:5:43:32.56%:47:1.727E-5:43:29:14:15:43 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:41 0/1:48:22:10:12:51:43.14%:78:1.3059E-8:44:29:14:15:51 0/1:50:12:5:7:37:32.43%:40:8.4418E-5:50:25:9:16:37 0/1:50:22:13:9:51:43.14%:78:1.3059E-8:49:29:13:16:51 0/1:45:30:14:16:67:44.78%:99:1.3693E-11:43:37:18:19:68 0/1:47:15:8:7:36:41.67%:53:4.8188E-6:44:21:4:17:36 0/1:45:28:14:14:69:40.58%:99:1.1744E-10:48:41:17:24:70 0/0:36:1:0:1:50:2%:80:5E-1:41:49:22:27:52 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:44 0/1:41:18:5:13:37:48.65%:66:2.432E-7:47:19:9:10:37 0/1:41:17:8:9:42:40.48%:60:9.9678E-7:46:25:6:19:42 0/1:44:18:5:13:37:48.65%:66:2.432E-7:42:19:7:12:37 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:41:0%:78:1E0:39:41:13:28:43 0/1:42:24:15:9:70:34.29%:82:5.4869E-9:38:46:26:20:70 0/1:47:19:8:11:51:37.25%:66:2.4191E-7:43:32:13:19:51 0/1:47:18:5:13:49:36.73%:62:5.6162E-7:45:31:15:16:49 0/1:40:19:9:10:45:42.22%:67:1.6979E-7:40:26:11:15:45 0/1:47:32:11:21:69:46.38%:99:1.8765E-12:44:36:17:19:69 0/1:46:18:5:13:44:40.91%:63:4.2568E-7:41:26:15:11:44 0/1:45:17:5:12:44:38.64%:59:1.1194E-6:46:27:11:16:44 0/1:44:18:7:11:38:47.37%:65:2.68E-7:44:20:9:11:38 0/1:43:17:9:8:42:40.48%:60:9.9678E-7:46:25:13:12:42 0/1:38:16:10:6:49:32.65%:54:3.5325E-6:44:33:18:15:51 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:43 0/0:0:0:0:0:57:0%:99:1E0:48:57:29:28:57 0/1:41:21:7:14:56:37.5%:73:4.4698E-8:41:34:13:21:57 0/0:0:0:0:0:48:0%:89:1E0:45:48:15:33:50 0/1:43:22:8:14:52:42.31%:78:1.4035E-8:41:30:12:18:53 0/1:45:24:11:13:59:40.68%:85:3.1153E-9:39:35:17:18:60 0/1:46:37:18:19:85:43.53%:99:4.6505E-14:44:48:20:28:86 0/0:39:1:1:0:79:1.27%:99:5E-1:43:78:30:48:80 0/1:40:18:11:7:62:29.03%:60:9.0099E-7:43:44:27:17:62 0/0:39:1:0:1:60:1.67%:98:5E-1:43:59:26:33:61 0/1:40:22:11:11:51:43.14%:79:1.2104E-8:43:28:16:12:51 0/1:41:26:12:14:52:50%:96:2.1991E-10:45:26:12:14:53 0/1:43:16:6:10:46:34.78%:55:3.1446E-6:44:30:14:16:49 0/1:44:27:16:11:65:41.54%:96:2.4148E-10:43:38:15:23:67 0/1:42:30:13:17:69:43.48%:99:1.6064E-11:41:39:13:26:69 0/0:0:0:0:0:52:0%:96:1E0:43:52:21:31:53 0/1:43:27:9:18:55:49.09%:99:1.0345E-10:42:28:14:14:57 0/1:40:31:15:16:62:50%:99:2.9394E-12:41:31:14:17:62 0/1:48:17:15:2:56:30.36%:57:1.8236E-6:43:39:15:24:56 0/1:48:15:3:12:30:50%:55:2.9161E-6:44:15:5:10:31 0/1:38:20:10:10:59:33.9%:68:1.3682E-7:42:39:17:22:61 0/1:47:13:4:9:30:43.33%:46:2.3178E-5:40:17:9:8:30 0/1:44:21:6:15:61:34.43%:72:5.9381E-8:46:40:19:21:62 0/1:43:21:12:9:53:39.62%:73:3.9927E-8:41:32:15:17:55 0/1:42:22:13:9:52:42.31%:78:1.4035E-8:44:30:16:14:53 0/1:41:10:6:4:35:28.57%:33:4.6276E-4:44:25:13:12:35 0/0:0:0:0:0:53:0%:99:1E0:44:53:16:37:53 0/1:43:29:11:18:55:52.73%:99:1.1491E-11:42:26:11:15:57 0/1:46:22:8:14:52:42.31%:78:1.4035E-8:46:30:10:20:55 0/1:44:18:5:13:38:47.37%:65:2.68E-7:40:20:7:13:40 0/1:46:20:9:11:51:39.22%:70:9.3266E-8:43:31:17:14:54 0/1:43:26:13:13:61:42.62%:93:4.9329E-10:44:35:21:14:63 0/1:44:18:10:8:42:42.86%:64:3.7193E-7:45:24:10:14:42 0/1:43:30:17:13:67:44.78%:99:1.3693E-11:43:37:10:27:67 0/1:45:28:9:19:70:40%:99:1.1744E-10:45:41:19:22:71 0/1:42:22:10:12:42:52.38%:82:5.4836E-9:39:20:8:12:42 0/1:44:28:12:16:74:37.84%:98:1.5731E-10:45:46:25:21:75 0/1:53:14:6:8:36:38.89%:48:1.2704E-5:47:22:13:9:36 0/1:44:11:6:5:30:36.67%:37:1.594E-4:46:19:5:14:30 0/1:45:19:10:9:53:35.85%:65:2.6625E-7:46:34:11:23:55 0/1:49:25:11:14:52:48.08%:91:6.4344E-10:50:27:14:13:52 0/1:52:15:10:5:54:27.78%:50:9.8829E-6:52:39:21:18:54 0/1:53:26:19:7:54:48.15%:95:2.7171E-10:46:28:16:12:54 0/1:41:34:19:15:64:53.12%:99:1.3489E-13:43:30:17:13:66 0/1:42:25:11:14:51:49.02%:92:5.8079E-10:42:26:14:12:51 0/1:42:23:8:15:58:39.66%:81:7.7551E-9:43:35:9:26:60 0/1:44:31:13:18:73:42.47%:99:7.9203E-12:45:42:25:17:73 0/0:0:0:0:0:61:0%:99:1E0:44:61:29:32:61 0/1:38:11:7:4:34:32.35%:37:1.8662E-4:44:23:8:15:34 0/1:40:21:11:10:52:40.38%:74:3.7578E-8:45:31:14:17:52 0/1:42:22:12:10:60:36.67%:76:2.242E-8:43:38:19:19:61 0/1:43:26:13:13:53:49.06%:96:2.4512E-10:43:27:15:12:53 0/0:0:0:0:0:47:0%:89:1E0:46:47:18:29:47 0/1:42:19:8:11:49:38.78%:66:2.1763E-7:40:30:13:17:49 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/1:43:13:6:7:32:40.62%:45:2.6443E-5:48:19:10:9:32 0/1:41:23:6:17:57:40.35%:81:7.2965E-9:47:34:15:19:58 0/1:47:17:4:13:42:40.48%:60:9.9678E-7:46:25:14:11:42 0/1:47:22:9:13:42:52.38%:82:5.4836E-9:48:20:7:13:43 0/1:47:17:9:8:45:37.78%:59:1.1805E-6:47:28:13:15:45 0/1:41:34:17:17:72:47.22%:99:3.3502E-13:42:38:13:25:73 0/1:42:18:7:11:42:42.86%:64:3.7193E-7:46:24:7:17:42 0/1:44:24:11:13:66:36.36%:83:4.5894E-9:42:42:18:24:66 0/1:40:15:5:10:44:34.09%:51:7.2456E-6:46:29:12:17:44 0/1:40:20:9:11:47:42.55%:71:7.2254E-8:43:27:12:15:49 0/1:40:28:9:19:58:48.28%:99:4.8441E-11:42:30:14:16:58 0/1:38:15:5:10:43:34.88%:51:6.9561E-6:41:28:11:17:43 0/1:42:26:15:11:65:40%:91:6.4394E-10:45:39:15:24:66 0/1:42:29:9:20:59:49.15%:99:1.8424E-11:43:30:14:16:60 0/1:42:29:16:13:74:39.19%:99:6.0302E-11:43:45:20:25:74 0/1:40:25:6:19:57:43.86%:90:9.9959E-10:40:32:12:20:57 0/1:40:21:7:14:50:42%:74:3.2974E-8:41:29:13:16:50 0/0:0:0:0:0:37:0%:70:1E0:42:37:10:27:38 0/1:43:25:12:13:47:53.19%:94:3.621E-10:42:22:8:14:47 0/1:41:22:15:7:56:39.29%:77:1.8121E-8:46:34:12:22:57 0/1:42:29:12:17:59:49.15%:99:1.8424E-11:44:30:10:20:60 0/1:44:23:12:11:45:51.11%:85:2.6125E-9:42:22:9:13:45 0/1:42:36:16:20:75:48%:99:5.4147E-14:42:39:16:23:75 0/1:43:16:7:9:41:39.02%:56:2.4696E-6:46:25:10:15:41 0/1:44:28:12:16:59:47.46%:99:5.349E-11:43:31:9:22:59 0/0:0:0:0:0:51:0%:97:1E0:40:51:21:30:52 0/1:44:23:7:16:58:39.66%:81:7.7551E-9:41:35:14:21:58 0/0:0:0:0:0:61:0%:99:1E0:39:61:27:34:66 0/0:0:0:0:0:75:0%:99:1E0:39:75:28:47:78 0/1:37:21:8:13:53:39.62%:73:3.9927E-8:40:32:15:17:54 0/1:41:27:10:17:58:46.55%:98:1.3907E-10:42:31:13:18:61 0/1:40:23:13:10:45:51.11%:85:2.6125E-9:37:22:12:10:47 0/1:45:26:11:15:57:45.61%:94:3.594E-10:43:31:16:15:57 0/1:44:23:11:12:60:38.33%:80:8.6933E-9:40:37:26:11:61 0/1:41:22:7:15:61:36.07%:76:2.3517E-8:44:39:11:28:61 0/1:40:23:6:17:39:58.97%:89:1.093E-9:43:16:9:7:40 0/1:37:16:6:10:44:36.36%:55:2.8784E-6:38:28:13:15:45 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:37:0%:70:1E0:38:37:22:15:38 0/0:0:0:0:0:38:0%:70:1E0:38:38:15:23:39 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:50 0/1:37:15:7:8:32:46.88%:54:3.5464E-6:43:17:11:6:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:31 0/1:38:23:13:10:52:44.23%:82:5.1348E-9:40:29:6:23:54 0/1:37:17:8:9:37:45.95%:61:6.9312E-7:40:20:8:12:39 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:19 0/1:37:10:6:4:26:38.46%:34:3.3576E-4:43:16:9:7:27 0/1:41:8:7:1:25:32%:26:2.0146E-3:40:17:4:13:25 0/1:44:24:11:13:45:53.33%:90:8.5784E-10:44:21:8:13:45 0/1:37:44:15:29:96:45.83%:99:8.8535E-17:38:52:23:29:97 0/1:44:25:12:13:66:37.88%:87:1.6904E-9:42:40:17:23:66 0/1:40:28:18:10:63:44.44%:99:7.6248E-11:40:35:12:23:64 0/1:40:19:7:12:65:29.23%:63:4.0861E-7:39:46:17:29:67 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:48 0/1:38:14:4:10:43:32.56%:47:1.727E-5:42:29:11:18:45 0/1:40:12:6:6:39:30.77%:40:9.0046E-5:40:27:12:15:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:15:29:44 0/0:0:0:0:0:61:0%:99:1E0:42:61:25:36:61 0/0:39:1:0:1:31:3.23%:48:5E-1:39:30:12:18:31 0/1:42:26:17:9:52:50%:96:2.1991E-10:45:26:12:14:53 0/1:45:30:8:22:59:50.85%:99:6.2104E-12:43:29:12:17:59 0/1:38:32:12:20:88:36.36%:99:7.3164E-12:42:56:33:23:88 0/1:43:23:13:10:48:47.92%:84:3.6075E-9:47:25:14:11:50 MTB_anc 3530955 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3161c_Rv3161c|gene3233|transcript|Transcript_gene3233|Coding|1/1|c.184C>G|p.Leu62Val|184/1149|184/1149|62/382||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3530955G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3530955G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:51:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:16:21:38:97.37%:99:5.6582E-21:38:1:1:0:39 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:68:28:40:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:50:33:17:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:54:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:64:24:40:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:44:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:37:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:60:33:27:60:100%:99:1.035E-35:0:0:0:0:60 1/1:39:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 MTB_anc 3537894 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|Rv3169_Rv3169|gene3241|transcript|Transcript_gene3241|Coding|1/1|c.657C>T|p.Ile219Ile|657/1125|657/1125|219/374||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3537894C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3537894C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|pyrazinamide|||n.3537894C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:44 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:21:0%:40:1E0:43:21:5:16:21 0/0:0:0:0:0:19:0%:37:1E0:42:19:6:13:19 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:6:19:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:0:0:0:0:44:0%:81:1E0:40:44:13:31:46 0/0:0:0:0:0:14:0%:25:1E0:49:14:10:4:14 0/0:0:0:0:0:48:0%:89:1E0:42:48:19:29:48 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:45:0%:85:1E0:41:45:18:27:47 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:16:0%:29:1E0:43:16:7:9:16 0/0:0:0:0:0:19:0%:37:1E0:41:19:5:14:19 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:10:24:34 0/0:0:0:0:0:56:0%:99:1E0:41:56:19:37:56 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:32:0%:59:1E0:39:32:9:23:32 0/0:0:0:0:0:17:0%:33:1E0:41:17:3:14:17 0/0:0:0:0:0:31:0%:59:1E0:43:31:10:21:31 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:41:24:6:18:24 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:21 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:13:27:42 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:48 0/0:0:0:0:0:40:0%:74:1E0:38:40:16:24:41 0/0:60:1:0:1:64:1.56%:99:5E-1:40:63:24:39:65 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:38 0/0:0:0:0:0:43:0%:82:1E0:41:43:15:28:43 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:19:0%:37:1E0:41:19:6:13:20 0/0:0:0:0:0:41:0%:78:1E0:40:41:18:23:43 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:9:23:34 0/0:0:0:0:0:40:0%:74:1E0:40:40:14:26:41 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:41 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:42 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 1/1:40:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:46 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:8:21:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:28 0/0:0:0:0:0:50:0%:92:1E0:40:50:16:34:52 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:29 0/0:0:0:0:0:49:0%:93:1E0:42:49:19:30:50 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:8:21:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:39 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:11:26:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:69:0%:99:1E0:44:69:27:42:70 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:33:1:0:1:36:2.78%:55:5E-1:41:35:11:24:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:38:31:10:21:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:37:1:1:0:42:2.38%:66:5E-1:40:41:16:25:42 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:36 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:27 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:38 0/0:0:0:0:0:49:0%:93:1E0:42:49:20:29:50 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:45 0/0:0:0:0:0:22:0%:40:1E0:41:22:7:15:22 0/0:0:0:0:0:23:0%:44:1E0:38:23:6:17:23 0/0:0:0:0:0:33:0%:63:1E0:39:33:7:26:33 0/0:0:0:0:0:45:0%:85:1E0:43:45:14:31:45 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:25 0/0:0:0:0:0:53:0%:99:1E0:40:53:15:38:53 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:11:27:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:31:0%:59:1E0:40:31:9:22:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:4:17:22 0/0:0:0:0:0:31:0%:59:1E0:39:31:9:22:32 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:34 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:25 0/0:0:0:0:0:24:0%:44:1E0:38:24:5:19:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:5:18:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:23 0/0:0:0:0:0:39:0%:74:1E0:39:39:10:29:39 0/0:0:0:0:0:30:0%:55:1E0:37:30:12:18:31 0/0:0:0:0:0:51:0%:97:1E0:37:51:14:37:53 0/0:0:0:0:0:29:0%:55:1E0:37:29:9:20:29 0/0:0:0:0:0:37:0%:70:1E0:40:37:9:28:37 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:61:0%:99:1E0:39:61:22:39:61 0/0:0:0:0:0:69:0%:99:1E0:40:69:21:48:69 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:22 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:25 0/0:0:0:0:0:45:0%:85:1E0:38:45:15:30:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:0:0:0:0:43:0%:82:1E0:39:43:10:33:44 0/0:0:0:0:0:38:0%:70:1E0:37:38:14:24:40 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:7:18:25 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:35 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:36:0%:66:1E0:39:36:15:21:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:8:21:29 0/0:0:0:0:0:37:0%:70:1E0:38:37:15:22:37 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:7:18:25 0/0:0:0:0:0:48:0%:89:1E0:38:48:15:33:48 0/0:0:0:0:0:37:0%:70:1E0:40:37:9:28:39 0/0:0:0:0:0:43:0%:82:1E0:40:43:16:27:43 0/0:0:0:0:0:47:0%:89:1E0:38:47:14:33:50 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:39:29:8:21:29 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:34:0%:62:1E0:39:34:10:24:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:5:18:23 0/0:0:0:0:0:32:0%:59:1E0:39:32:10:22:33 0/0:0:0:0:0:36:0%:66:1E0:38:36:15:21:36 0/0:0:0:0:0:49:0%:93:1E0:39:49:17:32:50 0/0:0:0:0:0:30:0%:55:1E0:41:30:5:25:31 MTB_anc 3544710 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|mesT_Rv3176c|gene3248|transcript|Transcript_gene3248|Coding|1/1|c.591A>G|p.Pro197Pro|591/957|591/957|197/318||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3544710T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3544710T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:36:20:16:39:92.31%:99:4.2179E-19:52:3:1:2:40 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:64:28:36:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:31:21:10:32:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:35:21:14:36:97.22%:99:8.3613E-20:60:1:0:1:36 1/1:44:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:43:24:19:44:97.73%:99:1.7144E-24:38:1:1:0:47 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 MTB_anc 3546617 . G A . PASS AC=72;AF=0.240;AN=300;ANN=A|synonymous_variant|LOW|Rv3178_Rv3178|gene3250|transcript|Transcript_gene3250|Coding|1/1|c.180G>A|p.Pro60Pro|180/360|180/360|60/119||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3546617G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3546617G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:30:17:47 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:23 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:41 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:35:0%:67:1E0:49:35:15:20:35 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:37:0%:70:1E0:53:37:18:19:37 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:43 0/0:39:1:1:0:18:5.56%:24:5E-1:44:17:8:9:18 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:21:0%:40:1E0:42:21:15:6:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:17:6:23 1/1:46:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:31 0/0:0:0:0:0:53:0%:99:1E0:46:53:25:28:53 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:21 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:29:0%:55:1E0:49:29:11:18:29 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:27:1:1:0:32:3.12%:48:5E-1:47:31:16:15:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:33 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:56:0%:99:1E0:46:56:29:27:57 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:49 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:39 0/0:0:0:0:0:48:0%:89:1E0:44:48:18:30:48 0/0:0:0:0:0:42:0%:77:1E0:46:42:20:22:42 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:38:1:1:0:45:2.22%:73:5E-1:46:44:21:23:46 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:48:0%:89:1E0:40:48:20:28:48 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:32:0%:59:1E0:51:32:15:17:32 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:40 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 1/1:47:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:48:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:60:34:26:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:25 0/0:38:1:1:0:23:4.35%:34:5E-1:44:22:9:13:23 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 1/1:45:34:17:17:35:97.14%:99:3.2089E-19:31:1:0:1:35 0/0:38:1:1:0:24:4.17%:34:5E-1:47:23:13:10:24 1/1:48:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:36 0/0:0:0:0:0:44:0%:81:1E0:46:44:22:22:44 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 1/1:43:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:16:0%:29:1E0:46:16:12:4:16 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 1/1:48:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:22 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:44 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:29 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 1/1:42:33:19:14:34:97.06%:99:1.2301E-18:60:1:0:1:35 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:46 0/0:0:0:0:0:33:0%:63:1E0:43:33:22:11:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:38 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:41 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:33 1/1:45:43:23:20:44:97.73%:99:1.7144E-24:38:1:1:0:47 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:51:0%:97:1E0:40:51:34:17:52 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 1/1:42:45:23:22:46:97.83%:99:1.1441E-25:38:1:1:0:49 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:40 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:44 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:43 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:49 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:41 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:58:0%:99:1E0:39:58:31:27:58 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:38 0/0:0:0:0:0:44:0%:81:1E0:46:44:20:24:44 1/1:41:47:31:16:48:97.92%:99:7.6145E-27:60:1:0:1:48 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 0/0:0:0:0:0:21:0%:40:1E0:42:21:14:7:21 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:50 0/0:0:0:0:0:57:0%:99:1E0:43:57:30:27:58 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:48 MTB_anc 3550011 . G C . PASS AC=14;AF=0.047;AN=300;ANN=C|missense_variant|MODERATE|Rv3181c_Rv3181c|gene3254|transcript|Transcript_gene3254|Coding|1/1|c.133C>G|p.Arg45Gly|133/453|133/453|45/150||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3550011G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3550011G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:43:53:18:35:57 0/0:0:0:0:0:25:0%:48:1E0:49:25:8:17:25 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:51 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:50:29:13:16:29 0/0:0:0:0:0:45:0%:85:1E0:49:45:24:21:45 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:50:30:19:11:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:0:0:0:0:53:0%:99:1E0:40:53:28:25:53 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:23 0/0:60:1:0:1:60:1.67%:98:5E-1:44:59:40:19:60 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:0:0:0:0:55:0%:99:1E0:42:55:30:25:55 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:35 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:16:26:42 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 0/0:0:0:0:0:40:0%:74:1E0:47:40:26:14:40 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:37 0/0:0:0:0:0:33:0%:63:1E0:45:33:21:12:33 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:43 0/0:0:0:0:0:56:0%:99:1E0:49:56:36:20:56 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:51 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:53 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:42:0%:77:1E0:44:42:14:28:43 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:52 0/0:60:1:0:1:31:3.23%:48:5E-1:47:30:15:15:31 0/0:0:0:0:0:23:0%:44:1E0:50:23:14:9:23 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:48 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:45 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:45 0/0:0:0:0:0:38:0%:70:1E0:51:38:18:20:38 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:46 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:52:25:27:53:98.11%:99:8.609E-30:38:1:1:0:53 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:11:0%:22:1E0:51:11:6:5:11 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:38:1:1:0:34:2.94%:51:5E-1:48:33:18:15:35 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:38 0/0:0:0:0:0:43:0%:82:1E0:41:43:25:18:44 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:35:0%:67:1E0:51:35:13:22:35 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:50:0%:92:1E0:43:50:20:30:50 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:10:25:35 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:19:9:28 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:56:0%:99:1E0:40:56:30:26:57 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:12:30:43 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:10:23:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:17:0%:33:1E0:46:17:9:8:18 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:32 0/0:0:0:0:0:40:0%:74:1E0:46:40:23:17:40 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:46 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:43 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:59:0%:99:1E0:42:59:34:25:59 0/0:0:0:0:0:63:0%:99:1E0:43:63:30:33:63 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:42 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:58:0%:99:1E0:40:58:27:31:59 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:48 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:44 0/0:0:0:0:0:51:0%:97:1E0:41:51:31:20:51 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:25:11:36 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:42 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:62:0%:99:1E0:38:62:26:36:62 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:41 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:43 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:39:1:1:0:44:2.27%:69:5E-1:43:43:22:21:44 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:46 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 MTB_anc 3550853 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|Rv3183_Rv3183|gene3256|transcript|Transcript_gene3256|Coding|1/1|c.139G>A|p.Ala47Thr|139/330|139/330|47/109||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3550853G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3550853G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:42:54:25:29:56 0/0:0:0:0:0:22:0%:40:1E0:51:22:8:14:22 0/0:0:0:0:0:48:0%:89:1E0:45:48:27:21:48 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:34:0%:62:1E0:51:34:16:18:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:50:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:51 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:20 0/0:38:1:1:0:38:2.63%:58:5E-1:44:37:15:22:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:49 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:45 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:40:0%:74:1E0:46:40:17:23:40 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:15:0%:29:1E0:47:15:8:7:15 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:51:0%:97:1E0:43:51:21:30:51 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:43 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:37 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:47 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:45 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:32 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:47 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:44 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:38 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:43 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:45 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:42:0%:77:1E0:45:42:19:23:42 0/0:0:0:0:0:45:0%:85:1E0:42:45:28:17:45 0/0:38:1:0:1:27:3.7%:38:5E-1:48:25:12:13:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:40 0/0:0:0:0:0:68:0%:99:1E0:46:68:30:38:68 0/0:0:0:0:0:25:0%:48:1E0:51:25:13:12:26 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:39 0/0:0:0:0:0:13:0%:25:1E0:47:13:6:7:13 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:33 0/0:0:0:0:0:32:0%:59:1E0:51:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 0/0:0:0:0:0:51:0%:97:1E0:43:51:18:33:53 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:34 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:33:0%:63:1E0:47:33:12:21:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:44 0/0:0:0:0:0:36:0%:66:1E0:47:36:22:14:36 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:11:17:28 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:25 0/0:33:1:1:0:23:4.35%:34:5E-1:49:22:11:11:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:31 0/0:0:0:0:0:29:0%:55:1E0:50:29:11:18:29 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:47 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:35 0/0:0:0:0:0:54:0%:99:1E0:45:54:32:22:54 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:30 0/0:39:1:1:0:51:1.96%:84:5E-1:46:50:28:22:53 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:41 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:40 0/0:0:0:0:0:38:0%:70:1E0:42:37:20:17:41 0/0:0:0:0:0:55:0%:99:1E0:40:55:28:27:57 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:35 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:34 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:63:33:30:63:100%:99:1.657E-37:0:0:0:0:63 0/0:0:0:0:0:64:0%:99:1E0:41:64:34:30:66 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:47 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:39 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:42 0/0:0:0:0:0:38:0%:70:1E0:39:38:15:23:39 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:49 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:49 0/0:0:0:0:0:42:0%:77:1E0:39:42:21:21:42 0/0:0:0:0:0:46:0%:85:1E0:39:46:20:26:51 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:66:0%:99:1E0:40:66:28:38:66 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:40 0/0:39:1:1:0:38:2.63%:58:5E-1:42:37:12:25:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:52 0/0:0:0:0:0:51:0%:97:1E0:46:51:25:26:52 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:32 MTB_anc 3555699 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3190c_Rv3190c|gene3259|transcript|Transcript_gene3259|Coding|1/1|c.989C>T|p.Ala330Val|989/1266|989/1266|330/421||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3555699G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3555699G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:54:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:91:44:47:91:100%:99:2.7621E-54:0:0:0:0:92 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:72:38:34:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:39:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:46:49:18:31:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:67:30:37:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 MTB_anc 3556607 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv3190c_Rv3190c|gene3259|transcript|Transcript_gene3259|Coding|1/1|c.81C>A|p.Ser27Arg|81/1266|81/1266|27/421||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3556607G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3556607G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:53:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:52:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:52:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:45:62:39:23:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:53:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:66:39:27:66:100%:99:2.6498E-39:0:0:0:0:69 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:50:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:15:10:26:96.15%:99:5.4444E-14:38:1:1:0:26 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:21:12:9:22:95.45%:99:1.0931E-11:34:1:1:0:22 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 3560645 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3193c_Rv3193c|gene3264|transcript|Transcript_gene3264|Coding|1/1|c.2528A>G|p.Gln843Arg|2528/2979|2528/2979|843/992||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3560645T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3560645T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:16:12:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:48:26:22:49:97.96%:99:1.554E-28:0:0:0:0:49 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:42:23:19:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:46:17:3:14:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:72:39:33:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:30:12:18:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:26:15:11:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:41:19:22:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:60:23:37:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:62:24:38:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:51:19:32:52:98.08%:99:2.5024E-30:0:0:0:0:53 1/1:43:49:17:32:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:59:26:33:60:98.33%:99:6.3137E-34:38:1:1:0:63 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 3560831 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv3193c_Rv3193c|gene3264|transcript|Transcript_gene3264|Coding|1/1|c.2342C>T|p.Ala781Val|2342/2979|2342/2979|781/992||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3560831G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3560831G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:52 0/0:0:0:0:0:17:0%:33:1E0:48:17:7:10:18 0/0:0:0:0:0:52:0%:96:1E0:48:52:30:22:53 0/0:0:0:0:0:42:0%:77:1E0:49:42:28:14:42 0/0:0:0:0:0:35:0%:67:1E0:46:35:16:19:36 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:53:33:13:20:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:27 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:26 0/0:0:0:0:0:39:0%:74:1E0:47:39:16:23:41 0/0:0:0:0:0:48:0%:89:1E0:42:48:17:31:49 0/0:0:0:0:0:35:0%:67:1E0:49:35:14:21:36 0/0:0:0:0:0:56:0%:99:1E0:46:56:25:31:57 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:53:0%:99:1E0:46:53:25:28:54 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:18:0%:32:1E0:43:18:10:8:18 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:19 0/0:0:0:0:0:28:0%:51:1E0:47:28:10:18:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:37 0/0:38:1:0:1:32:3.12%:48:5E-1:45:31:11:20:32 0/0:60:1:1:0:36:2.78%:55:5E-1:44:35:13:22:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:36 0/0:0:0:0:0:38:0%:70:1E0:47:38:25:13:39 0/0:0:0:0:0:51:0%:97:1E0:47:51:30:21:51 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:39 0/0:0:0:0:0:44:0%:81:1E0:43:44:14:30:45 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:24 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:45:0%:85:1E0:47:45:24:21:45 0/0:0:0:0:0:19:0%:37:1E0:44:19:4:15:19 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:38 0/0:0:0:0:0:23:0%:44:1E0:48:23:15:8:23 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:38:0%:70:1E0:52:38:14:24:38 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:42:0%:77:1E0:44:42:27:15:42 0/0:0:0:0:0:49:0%:93:1E0:46:49:22:27:51 0/0:0:0:0:0:36:0%:66:1E0:49:36:20:16:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:37 0/0:0:0:0:0:96:0%:99:1E0:46:96:46:50:97 0/0:0:0:0:0:30:0%:55:1E0:47:30:20:10:30 0/0:0:0:0:0:34:0%:62:1E0:49:34:18:16:34 0/0:0:0:0:0:14:0%:25:1E0:43:14:4:10:14 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:12:23:36 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:31 0/0:60:1:1:0:23:4.35%:34:5E-1:49:22:8:14:23 0/0:0:0:0:0:39:0%:74:1E0:48:39:26:13:39 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:44 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:16:25:41 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:23:0%:44:1E0:49:23:8:15:23 0/0:0:0:0:0:32:0%:59:1E0:50:32:11:21:33 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:47:0%:89:1E0:43:47:19:28:48 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:36 0/0:0:0:0:0:50:0%:92:1E0:42:50:21:29:52 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:17:28:45 0/0:0:0:0:0:23:0%:44:1E0:44:23:16:7:23 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:43 0/0:0:0:0:0:30:0%:55:1E0:47:30:11:19:31 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:44 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:37:0%:70:1E0:48:37:20:17:37 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:21:7:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:38 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:50 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:33 0/0:0:0:0:0:46:0%:85:1E0:46:46:21:25:48 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:59:0%:99:1E0:43:59:29:30:60 0/0:0:0:0:0:57:0%:99:1E0:43:57:29:28:59 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:21:0%:40:1E0:40:21:6:15:21 0/0:0:0:0:0:51:0%:97:1E0:39:51:22:29:53 0/0:0:0:0:0:40:0%:74:1E0:39:40:17:23:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:44 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:46 0/0:0:0:0:0:49:0%:93:1E0:40:49:27:22:51 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:37 0/0:0:0:0:0:48:0%:89:1E0:42:48:24:24:48 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:48 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:45 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:37 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:50:0%:92:1E0:40:50:20:30:53 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:38:1:1:0:39:2.56%:62:5E-1:44:38:19:19:41 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:38 0/0:0:0:0:0:49:0%:93:1E0:45:49:31:18:50 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:41 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:43 0/0:0:0:0:0:59:0%:99:1E0:42:59:28:31:62 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:46 MTB_anc 3562218 . T C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv3193c_Rv3193c|gene3264|transcript|Transcript_gene3264|Coding|1/1|c.955A>G|p.Lys319Glu|955/2979|955/2979|319/992||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3562218T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3562218T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:15:0%:29:1E0:49:15:7:8:15 0/0:0:0:0:0:45:0%:85:1E0:47:45:25:20:45 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:37 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/1:45:18:7:11:32:56.25%:68:1.3089E-7:55:14:11:3:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:0:0:0:0:34:0%:62:1E0:48:34:15:19:35 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:38 0/0:0:0:0:0:42:0%:77:1E0:50:42:28:14:43 0/0:0:0:0:0:57:0%:99:1E0:46:57:26:31:59 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:43 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:33 0/0:0:0:0:0:21:0%:40:1E0:48:21:15:6:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:36 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:21 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:25:13:39 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:32:1:0:1:25:4%:38:5E-1:47:24:15:9:27 0/0:0:0:0:0:38:0%:70:1E0:49:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:27:11:38 0/0:0:0:0:0:60:0%:99:1E0:49:60:33:27:61 0/0:0:0:0:0:53:0%:99:1E0:46:53:31:22:55 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:25 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:41 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:25 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:21:0%:40:1E0:46:21:14:7:21 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:44 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:48:0%:89:1E0:48:48:29:19:48 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:34 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:21 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:44 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:39:0%:74:1E0:45:39:27:12:40 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:36 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:42 0/0:0:0:0:0:48:0%:89:1E0:46:48:24:24:49 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:37:0%:70:1E0:50:37:28:9:37 0/0:0:0:0:0:80:0%:99:1E0:45:80:44:36:82 0/0:0:0:0:0:19:0%:37:1E0:47:19:6:13:19 0/0:0:0:0:0:39:0%:74:1E0:47:39:28:11:41 0/0:0:0:0:0:15:0%:29:1E0:52:15:8:7:15 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:42:0%:77:1E0:48:42:25:17:44 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:36 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:32 0/0:0:0:0:0:51:0%:97:1E0:49:51:30:21:51 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:53:0%:99:1E0:44:53:31:22:54 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:30 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:28:0%:51:1E0:48:28:8:20:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:41 0/0:0:0:0:0:26:0%:47:1E0:49:26:9:17:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:42 0/0:0:0:0:0:39:0%:74:1E0:44:39:25:14:39 0/0:0:0:0:0:61:0%:99:1E0:43:61:31:30:62 0/0:0:0:0:0:12:0%:21:1E0:44:12:6:6:13 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:15:27:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:44 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:42 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:48:31:13:18:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:22:12:34 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:29 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:48 0/0:0:0:0:0:46:0%:85:1E0:40:46:28:18:50 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:39 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:62:0%:99:1E0:41:62:27:35:63 0/0:0:0:0:0:60:0%:99:1E0:41:60:30:30:60 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:32 0/0:0:0:0:0:53:0%:99:1E0:42:53:34:19:53 0/0:0:0:0:0:48:0%:89:1E0:38:48:24:24:48 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:44 0/0:0:0:0:0:49:0%:93:1E0:44:49:31:18:50 0/0:0:0:0:0:42:0%:77:1E0:44:42:24:18:46 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:41 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:50 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:34 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:52 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:61:0%:99:1E0:39:61:30:31:66 0/0:0:0:0:0:55:0%:99:1E0:40:55:30:25:55 0/0:0:0:0:0:59:0%:99:1E0:41:59:27:32:63 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:42 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:47 0/0:0:0:0:0:50:0%:92:1E0:43:50:22:28:51 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:38 0/0:0:0:0:0:53:0%:99:1E0:44:53:23:30:53 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:46 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:41 MTB_anc 3566202 . T C . PASS AC=3;AF=0.010;AN=300;ANN=C|missense_variant|MODERATE|Rv3196_Rv3196|gene3267|transcript|Transcript_gene3267|Coding|1/1|c.415T>C|p.Cys139Arg|415/900|415/900|139/299||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3566202T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3566202T>C||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:57:0%:99:1E0:44:57:29:28:59 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:48 0/0:0:0:0:0:16:0%:29:1E0:43:16:7:9:16 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:26 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:25 0/0:0:0:0:0:26:0%:47:1E0:49:26:17:9:27 0/0:0:0:0:0:22:0%:40:1E0:45:22:16:6:23 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:39 0/0:0:0:0:0:15:0%:29:1E0:49:15:8:7:15 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:49 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:29 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:23:0%:44:1E0:50:23:9:14:23 0/0:0:0:0:0:23:0%:44:1E0:48:23:8:15:23 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:30 0/0:0:0:0:0:54:0%:99:1E0:44:54:28:26:54 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:26:0%:47:1E0:50:26:16:10:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:39:0%:74:1E0:47:39:24:15:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:27:10:37 0/0:0:0:0:0:36:0%:66:1E0:49:36:21:15:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:38:0%:70:1E0:51:38:17:21:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:63:0%:99:1E0:49:63:31:32:63 0/0:0:0:0:0:45:0%:85:1E0:48:45:26:19:45 0/0:0:0:0:0:54:0%:99:1E0:48:54:27:27:55 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:45 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:43 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:52 0/0:0:0:0:0:55:0%:99:1E0:43:55:34:21:55 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:39 0/0:0:0:0:0:29:0%:55:1E0:47:29:19:10:29 0/0:0:0:0:0:56:0%:99:1E0:44:56:26:30:56 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:51 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:48:0%:89:1E0:44:48:16:32:51 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:43 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:53:0%:99:1E0:46:53:27:26:53 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:34 0/0:0:0:0:0:63:0%:99:1E0:47:63:32:31:64 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:47:0%:89:1E0:46:47:17:30:47 0/0:0:0:0:0:17:0%:33:1E0:49:17:7:10:19 0/0:0:0:0:0:13:0%:25:1E0:45:13:8:5:13 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:48:32:11:21:32 0/0:0:0:0:0:57:0%:99:1E0:43:57:27:30:57 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:48:30:19:11:30 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:37 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:28 0/0:0:0:0:0:51:0%:97:1E0:43:51:25:26:51 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:51 0/0:0:0:0:0:23:0%:44:1E0:50:23:10:13:23 0/0:0:0:0:0:42:0%:77:1E0:48:42:23:19:42 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:29 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:25 0/0:0:0:0:0:59:0%:99:1E0:41:59:30:29:61 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:41 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:15 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:36 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:8:22:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:38:0%:70:1E0:38:38:15:23:38 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:49 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:40 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:54:0%:99:1E0:44:54:32:22:54 0/0:0:0:0:0:49:0%:93:1E0:42:49:28:21:50 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:30 0/0:0:0:0:0:58:0%:99:1E0:39:58:28:30:58 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:40 0/0:0:0:0:0:55:0%:99:1E0:42:55:26:29:56 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:30 0/0:0:0:0:0:46:0%:85:1E0:39:46:20:26:47 0/1:47:28:16:12:34:82.35%:99:1.349E-13:45:6:5:1:37 0/0:0:0:0:0:44:0%:81:1E0:40:44:29:15:45 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:53 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:66:0%:99:1E0:38:66:37:29:68 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:41 0/0:0:0:0:0:54:0%:99:1E0:40:54:23:31:54 0/0:0:0:0:0:43:0%:82:1E0:44:43:15:28:44 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:19:8:27 0/0:0:0:0:0:51:0%:97:1E0:44:51:27:24:51 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:46:0%:85:1E0:44:46:25:21:47 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:41 0/0:0:0:0:0:52:0%:96:1E0:41:52:24:28:53 MTB_anc 3566943 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv3196A_Rv3196A-Rv3197_Rv3197|gene3268-gene3269|intergenic_region|gene3268-gene3269|||n.3566943G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:67:33:34:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:51:28:16:12:29:96.55%:99:9.9776E-16:38:1:0:1:29 1/1:47:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:76:34:42:76:100%:99:2.711E-45:0:0:0:0:77 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:52:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:51:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:63:36:27:63:100%:99:1.657E-37:0:0:0:0:64 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:64:38:26:64:100%:99:4.1752E-38:0:0:0:0:67 1/1:44:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:47 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 3571834 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|nudC_Rv3199c|gene3273|transcript|Transcript_gene3273|Coding|1/1|c.710C>A|p.Pro237Gln|710/942|710/942|237/313||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3571834G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3571834G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|isoniazid_ethionamide_prothionamide|||n.3571834G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:50:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:66:36:30:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:52:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:81:43:38:81:100%:99:2.7329E-48:0:0:0:0:82 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:60:25:35:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:68:42:26:68:100%:99:1.6809E-40:0:0:0:0:70 1/1:42:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:62:40:22:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 3573636 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv3200c_Rv3200c|gene3274|transcript|Transcript_gene3274|Coding|1/1|c.34G>A|p.Asp12Asn|34/1068|34/1068|12/355||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3573636C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3573636C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:53:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:32:16:16:33:96.97%:99:4.7095E-18:38:1:0:1:33 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:63:28:35:63:100%:99:1.657E-37:0:0:0:0:64 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:36 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:29:13:16:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:78:36:42:78:100%:99:1.7165E-46:0:0:0:0:79 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:51:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:47:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:35:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:37:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 MTB_anc 3574546 . A C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv3201c_Rv3201c|gene3275|transcript|Transcript_gene3275|Coding|1/1|c.2491T>G|p.Trp831Gly|2491/3306|2491/3306|831/1101||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3574546A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3574546A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:48 0/0:0:0:0:0:20:0%:36:1E0:52:20:10:10:20 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:44 0/0:0:0:0:0:24:0%:44:1E0:48:24:17:7:26 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:32 0/0:0:0:0:0:34:0%:62:1E0:47:34:8:26:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:9:18:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:38 0/0:0:0:0:0:14:0%:25:1E0:44:14:5:9:14 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:48 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:48:25:8:17:25 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:42 0/0:0:0:0:0:71:0%:99:1E0:45:71:30:41:74 0/0:0:0:0:0:21:0%:40:1E0:51:21:7:14:22 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:13:26:39 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:12:27:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:21:10:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:36 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:46 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:52 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:39 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:45 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:49 0/0:0:0:0:0:50:0%:92:1E0:45:50:21:29:52 0/0:0:0:0:0:35:0%:67:1E0:46:35:11:24:36 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:45 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:44 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:47:0%:89:1E0:41:47:18:29:48 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:42 0/0:0:0:0:0:47:0%:89:1E0:41:47:19:28:47 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:54:0%:99:1E0:45:54:27:27:54 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:40 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:49 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:54:0%:99:1E0:47:54:25:29:54 0/0:0:0:0:0:85:0%:99:1E0:47:85:33:52:87 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:40 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:23 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:32:0%:59:1E0:50:32:18:14:33 0/0:0:0:0:0:19:0%:37:1E0:49:19:6:13:20 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:17 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:23 0/0:0:0:0:0:38:0%:70:1E0:39:38:15:23:41 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:31 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:39 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:38:0%:70:1E0:45:38:24:14:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:36 0/0:0:0:0:0:56:0%:99:1E0:46:56:23:33:56 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:12:20:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:44 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:35:0%:67:1E0:49:35:20:15:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:25 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:47:0%:89:1E0:47:47:22:25:50 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:25 0/0:0:0:0:0:41:0%:78:1E0:43:41:13:28:43 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:24 0/0:0:0:0:0:28:0%:51:1E0:44:28:5:23:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:7:21:29 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:34:0%:62:1E0:45:34:10:24:34 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:37 0/0:0:0:0:0:48:0%:89:1E0:39:48:19:29:48 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:46 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:27 0/0:0:0:0:0:68:0%:99:1E0:39:68:34:34:68 0/0:0:0:0:0:58:0%:99:1E0:41:58:29:29:59 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:21:0%:40:1E0:39:21:13:8:21 0/0:0:0:0:0:49:0%:93:1E0:38:49:19:30:49 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:49:0%:93:1E0:40:49:27:22:51 0/0:0:0:0:0:53:0%:99:1E0:38:53:28:25:55 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:37 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:34 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:48 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:39 0/0:0:0:0:0:52:0%:96:1E0:41:52:20:32:54 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:35 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:30 0/0:0:0:0:0:54:0%:99:1E0:38:54:26:28:56 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:13:27:40 0/0:0:0:0:0:44:0%:81:1E0:38:44:20:24:46 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:39 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:38 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:56:0%:99:1E0:41:56:22:34:56 0/0:0:0:0:0:43:0%:82:1E0:39:43:16:27:43 MTB_anc 3577958 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3202c_Rv3202c|gene3276|transcript|Transcript_gene3276|Coding|1/1|c.2243C>T|p.Ala748Val|2243/3168|2243/3168|748/1055||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3577958G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3577958G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:28 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:28 1/1:36:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:37:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:41 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:42:31:11:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:41 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:33 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:36:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:37:49:30:19:49:100%:99:3.925E-29:0:0:0:0:54 1/1:38:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:38:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:38:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:44 1/1:35:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:34:24:18:6:24:100%:99:3.101E-14:0:0:0:0:27 1/1:37:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:36:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:44 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:20:19:1:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:19 1/1:36:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:31:25:6:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:36:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:37:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:36:30:24:6:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:36:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:31 MTB_anc 3580636 . CT C . PASS AC=299;AF=0.997;AN=300;ANN=C|intergenic_region|MODIFIER|Rv3202a_Rv3202a-lipV_Rv3203|gene3277-gene3278|intergenic_region|gene3277-gene3278|||n.3580637delT||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:40:13:27:39:97.56%:99:9.3017E-24:0:0:0:0:40 1/1:44:17:8:9:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:47:24:23:49:95.92%:99:5.0044E-26:39:2:1:1:49 1/1:45:23:8:15:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:18:6:12:19:90%:87:1.6758E-9:33:2:2:0:20 1/1:51:30:14:16:32:93.75%:99:3.0612E-16:47:2:2:0:32 1/1:52:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:11:15:28:92.86%:99:5.6872E-14:33:2:0:2:28 1/1:41:45:21:24:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:22:8:14:23:95.65%:99:2.9149E-12:39:1:1:0:23 1/1:43:41:20:21:44:93.18%:99:6.1775E-22:33:3:1:2:44 1/1:41:27:16:11:28:93.1%:99:1.5465E-14:36:2:1:1:29 1/1:45:29:12:17:31:93.55%:99:1.1344E-15:33:2:2:0:31 1/1:43:23:10:13:25:92%:99:2.7767E-12:33:2:1:1:25 1/1:41:23:10:13:23:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:47:29:15:14:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:53:19:34:54:98.15%:99:2.2126E-30:35:1:0:1:54 1/1:45:22:12:10:24:91.67%:99:1.0078E-11:46:2:1:1:24 1/1:44:36:17:19:37:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:42:31:13:18:32:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:44:25:15:10:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:40:20:8:12:20:95.24%:99:4.0873E-11:32:1:0:1:21 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:14:17:32:96.88%:99:1.8007E-17:33:1:1:0:32 1/1:43:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:36:19:17:37:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:46:31:15:16:32:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:49:27:14:13:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:43:33:16:17:35:94.29%:99:5.9366E-18:33:2:1:1:35 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:16:18:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:57:26:31:59:96.61%:99:7.5133E-32:49:2:2:0:59 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:39:22:17:39:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:43:40:22:18:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:36:17:19:38:94.74%:99:1.1316E-19:34:2:0:2:38 1/1:43:40:21:19:41:97.56%:99:9.8874E-23:33:1:1:0:41 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:27:14:13:28:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:40:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:46:30:16:44:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:20:7:13:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:28:13:15:29:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:45:46:24:22:48:95.83%:99:1.9036E-25:32:2:1:1:48 1/1:39:37:22:15:38:97.37%:99:5.6582E-21:38:1:1:0:38 1/1:44:31:13:18:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:44:42:22:20:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:44:21:23:46:95.65%:99:2.7459E-24:32:2:1:1:46 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:35:13:22:36:97.22%:99:8.3613E-20:34:1:1:0:36 1/1:45:72:35:37:74:97.3%:99:1.2199E-40:33:2:1:1:74 0/1:43:26:11:15:29:89.66%:99:1.6496E-13:40:3:0:3:29 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:37:21:16:37:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:50:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:26:11:15:26:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:52:30:14:16:31:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:44:22:22:45:97.78%:99:4.4304E-25:37:1:1:0:45 1/1:45:36:20:16:38:94.74%:99:1.1316E-19:60:2:2:0:38 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:19:9:10:20:95%:98:1.5234E-10:32:1:1:0:20 1/1:45:32:16:16:34:94.12%:99:2.2142E-17:32:2:0:2:34 1/1:43:51:32:19:50:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:37:14:23:38:94.87%:99:3.0128E-20:33:2:1:1:39 1/1:45:38:21:17:39:97.44%:99:1.4697E-21:34:1:0:1:39 1/1:41:44:22:22:46:95.65%:99:2.7459E-24:33:2:1:1:47 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:37:23:14:37:97.37%:99:5.6582E-21:60:1:1:0:38 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:24:11:13:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:40:37:18:19:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:44:16:28:45:97.78%:99:4.4304E-25:33:1:1:0:45 1/1:43:21:8:13:22:95.45%:99:1.0931E-11:37:1:1:0:22 1/1:45:24:10:14:25:96%:99:2.0568E-13:32:1:0:1:25 1/1:42:32:18:14:33:94.12%:99:4.7095E-18:32:1:1:0:33 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:43:17:26:42:97.73%:99:1.7144E-24:34:1:1:0:45 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:39:20:19:39:95.12%:99:2.1258E-21:32:2:0:2:41 1/1:41:27:12:15:27:96.43%:99:3.7915E-15:33:1:0:1:28 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:33:22:11:35:94.29%:99:5.9366E-18:35:2:1:1:35 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:30:15:15:31:96.77%:99:6.8754E-17:34:1:1:0:32 1/1:39:37:19:18:38:97.37%:99:5.6582E-21:34:1:1:0:38 1/1:39:34:16:18:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:42:22:20:43:97.67%:99:6.6289E-24:32:1:1:0:43 1/1:45:33:18:15:36:91.67%:99:2.0653E-17:34:3:0:3:36 1/1:39:37:19:18:36:97.37%:99:5.6582E-21:32:1:1:0:38 1/1:43:55:26:29:54:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:46:25:21:47:97.87%:99:2.9526E-26:34:1:0:1:47 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:28:12:16:30:93.33%:99:4.194E-15:32:2:1:1:30 1/1:40:45:25:20:45:95.74%:99:7.2338E-25:33:2:1:1:47 1/1:38:29:10:19:28:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:40:43:25:18:44:95.56%:99:1.0412E-23:33:2:0:2:45 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:54:29:25:55:98.18%:99:5.6837E-31:37:1:1:0:55 1/1:39:41:14:27:42:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:45:40:10:30:42:95.24%:99:5.6346E-22:33:2:0:2:42 1/1:42:38:20:18:39:97.44%:99:1.4697E-21:32:1:1:0:39 1/1:40:38:15:23:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:26:15:11:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:42:29:10:19:29:96.67%:99:2.6212E-16:33:1:1:0:30 1/1:40:25:11:14:26:96.15%:99:5.4444E-14:33:1:1:0:26 1/1:39:63:38:25:63:98.44%:99:2.7139E-36:33:1:0:1:64 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:19:19:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:38:13:25:40:95%:99:8.0088E-21:35:2:1:1:40 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:37:14:23:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:53:29:24:55:96.36%:99:1.6199E-29:32:2:1:1:55 1/1:40:43:20:23:42:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 3590686 . G GC . PASS AC=300;AF=1.00;AN=300;ANN=GC|intergenic_region|MODIFIER|Rv3212_Rv3212-Rv3213c_Rv3213c|gene3288-gene3289|intergenic_region|gene3288-gene3289|||n.3590686_3590687insC||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:54:29:25:53:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:29:9:20:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:19:11:8:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:23:7:16:25:92%:99:7.7525E-13:55:1:1:0:25 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:13:6:7:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:38:17:21:41:92.68%:99:3.1178E-20:33:3:2:1:41 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:19:6:13:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:28:13:15:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:13:16:31:93.55%:99:1.1344E-15:33:2:1:1:31 1/1:39:34:14:20:35:94.44%:99:1.5887E-18:46:2:0:2:36 1/1:46:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:44:41:18:23:42:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:21:13:35:97.14%:99:3.2089E-19:33:1:1:0:35 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:12:26:39:97.44%:99:1.4697E-21:32:1:0:1:39 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:16:22:37:97.44%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:14:17:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:26:15:11:26:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:47:59:27:32:58:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:49:29:20:48:100%:99:3.925E-29:0:0:0:0:49 1/1:45:47:21:26:48:97.92%:99:6.1512E-28:0:0:0:0:48 1/1:39:26:13:13:25:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:22:12:10:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:23:15:8:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:35:18:17:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:12:26:40:95%:99:8.0088E-21:34:2:1:1:40 1/1:41:33:16:17:35:94.29%:99:1.2301E-18:33:1:0:1:35 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:26:14:12:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:48:17:31:49:97.96%:99:1.9625E-27:32:1:0:1:49 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:38:16:22:39:97.44%:99:1.4697E-21:36:1:1:0:39 1/1:42:36:18:18:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:12:20:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:39:19:20:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:32:16:16:31:96.97%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:17:19:35:97.3%:99:2.2598E-21:0:0:0:0:36 1/1:44:76:23:53:75:100%:99:2.711E-45:0:0:0:0:76 1/1:42:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:41:20:21:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:47:18:9:9:19:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:50:23:8:15:24:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:40:47:19:28:47:95.92%:99:6.1512E-28:0:0:0:0:49 1/1:49:29:11:18:30:96.67%:99:2.6212E-16:33:1:1:0:30 1/1:46:26:9:17:26:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:45:31:18:13:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:33:17:16:33:97.06%:99:1.2301E-18:34:1:0:1:34 1/1:44:42:18:24:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:36:24:10:14:26:96%:99:2.0568E-13:32:1:1:0:26 1/1:42:29:13:16:30:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:40:20:20:41:95.24%:99:5.6346E-22:33:2:2:0:42 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:12:19:32:93.94%:99:1.8007E-17:34:1:0:1:32 1/1:43:29:15:14:31:93.55%:99:1.1344E-15:46:2:0:2:31 1/1:44:28:14:14:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:21:7:14:21:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:49:25:24:47:100%:99:3.925E-29:0:0:0:0:49 1/1:44:17:7:10:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:21:10:11:19:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:20:7:13:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:39:15:24:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:15:15:29:96.77%:99:6.8754E-17:29:1:0:1:31 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:18:7:11:16:94.74%:92:5.6585E-10:33:1:1:0:19 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:31:11:20:33:93.94%:99:8.2416E-17:47:2:1:1:33 1/1:44:34:9:25:35:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:43:26:15:11:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:41:24:12:12:25:96%:99:2.0568E-13:32:1:0:1:25 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:28:8:20:28:96.55%:99:9.9776E-16:29:1:0:1:30 1/1:38:50:12:38:49:96.15%:99:1.3013E-28:34:1:1:0:52 1/1:37:28:17:11:31:90.32%:99:1.2857E-14:30:3:2:1:31 1/1:43:36:13:23:36:97.3%:99:2.1762E-20:32:1:0:1:37 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:40:17:23:41:97.56%:99:9.8874E-23:34:1:1:0:41 1/1:38:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:27:12:15:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:58:35:23:54:100%:99:1.6283E-34:0:0:0:0:58 1/1:37:42:19:23:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:43:15:28:39:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:29:16:13:29:93.55%:99:1.1344E-15:34:2:1:1:31 1/1:36:42:15:27:40:97.67%:99:6.6289E-24:37:1:1:0:43 1/1:36:28:7:21:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:30:15:15:30:96.77%:99:6.8754E-17:33:1:1:0:31 1/1:39:28:12:16:27:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:36:41:20:21:38:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:40:29:12:17:31:90.62%:99:3.5714E-15:33:3:0:3:32 1/1:36:43:18:25:39:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:34:17:17:34:97.14%:99:3.2089E-19:33:1:0:1:35 1/1:39:30:11:19:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:50:24:26:49:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:35:17:18:36:94.59%:99:8.3613E-20:38:1:1:0:36 1/1:42:42:11:31:41:97.67%:99:6.6289E-24:37:1:1:0:43 1/1:41:49:21:28:49:98%:99:5.0549E-28:33:1:0:1:50 1/1:39:39:16:23:37:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:14:20:34:97.14%:99:3.2089E-19:33:1:1:0:36 1/1:44:27:11:16:28:96.43%:99:3.7915E-15:29:1:0:1:28 1/1:42:39:19:20:38:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:46:22:24:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 3593615 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3593615T>G||||||,G|intragenic_variant|MODIFIER|Rv3216_Rv3216|gene3292|gene_variant|gene3292|||n.3593615T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:43:59:26:33:59 0/0:0:0:0:0:27:0%:52:1E0:50:27:15:12:27 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:28 0/0:0:0:0:0:31:0%:59:1E0:49:31:21:10:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:14:24:38 0/0:20:1:1:0:38:2.63%:58:5E-1:43:37:16:21:38 0/0:0:0:0:0:25:0%:48:1E0:51:25:14:11:25 0/0:0:0:0:0:62:0%:99:1E0:44:62:23:39:62 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:45 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:18:0%:32:1E0:49:18:10:8:18 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:49 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:19:0%:37:1E0:42:19:5:14:19 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:48:0%:89:1E0:46:48:28:20:48 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:39 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:65:0%:99:1E0:44:65:41:24:65 0/0:0:0:0:0:45:0%:85:1E0:45:45:16:29:47 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:40 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:29 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:40 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:43:0%:82:1E0:46:43:24:19:43 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:31 0/0:24:1:1:0:40:2.5%:62:5E-1:45:39:20:19:40 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:46 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:19 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:44 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:23 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:36 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:39 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:47:0%:89:1E0:47:47:21:26:47 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:40 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:46:0%:85:1E0:45:46:31:15:46 0/0:0:0:0:0:73:0%:99:1E0:45:73:34:39:74 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:49 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:38 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:40:0%:74:1E0:48:40:22:18:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:45:0%:85:1E0:49:45:18:27:45 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:25:13:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:41 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:46 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:41 0/0:0:0:0:0:22:0%:40:1E0:49:22:13:9:22 0/0:0:0:0:0:40:0%:74:1E0:43:40:15:25:40 0/0:0:0:0:0:35:0%:67:1E0:51:35:15:20:36 0/0:0:0:0:0:51:0%:97:1E0:41:51:29:22:51 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:49:0%:93:1E0:42:49:24:25:49 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:51:0%:97:1E0:45:51:28:23:51 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:20 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:39 0/0:0:0:0:0:47:0%:89:1E0:43:47:19:28:47 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:38:0%:70:1E0:48:38:17:21:38 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:46 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 0/0:0:0:0:0:30:0%:55:1E0:37:30:17:13:31 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:44 0/0:0:0:0:0:36:0%:66:1E0:40:36:21:15:36 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:50 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:34 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:62:0%:99:1E0:41:62:29:33:64 0/0:0:0:0:0:58:0%:99:1E0:44:58:32:26:58 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:46 0/0:0:0:0:0:30:0%:55:1E0:38:30:12:18:31 0/0:0:0:0:0:48:0%:89:1E0:39:48:25:23:48 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:48 0/0:0:0:0:0:46:0%:85:1E0:39:46:28:18:46 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:44 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:42:0%:77:1E0:41:42:27:15:43 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:40 0/0:0:0:0:0:36:0%:66:1E0:39:36:23:13:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:50:0%:92:1E0:40:50:22:28:51 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:36 0/0:0:0:0:0:47:0%:89:1E0:39:47:18:29:48 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:43 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:22 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:12:24:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:52 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 MTB_anc 3596655 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv3220c_Rv3220c|gene3296|transcript|Transcript_gene3296|Coding|1/1|c.880A>C|p.Lys294Gln|880/1506|880/1506|294/501||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3596655T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3596655T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:44:56:22:34:59 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:24 0/0:0:0:0:0:54:0%:99:1E0:45:54:28:26:54 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:40:0%:74:1E0:47:40:21:19:40 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:37:0%:70:1E0:52:37:17:20:37 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:57:0%:99:1E0:48:57:23:34:59 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:57:0%:99:1E0:46:57:26:31:61 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:17 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:22:0%:40:1E0:47:22:7:15:22 0/0:0:0:0:0:33:0%:63:1E0:48:33:20:13:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:49:34:20:14:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:51:0%:97:1E0:44:51:24:27:51 0/0:0:0:0:0:63:0%:99:1E0:48:63:29:34:63 0/0:0:0:0:0:47:0%:89:1E0:47:47:20:27:47 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:47 0/0:0:0:0:0:50:0%:92:1E0:43:50:32:18:50 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:52:0%:96:1E0:44:52:27:25:53 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:44 0/0:0:0:0:0:22:0%:40:1E0:53:22:14:8:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:11:20:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:37:1:1:0:62:1.61%:99:5E-1:43:61:35:26:64 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:13:0%:25:1E0:48:13:4:9:13 0/0:0:0:0:0:53:0%:99:1E0:46:53:25:28:53 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:20:10:30 0/1:51:7:6:1:44:15.91%:22:6.0363E-3:44:37:19:18:44 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:31 0/0:0:0:0:0:50:0%:92:1E0:43:50:33:17:51 0/0:0:0:0:0:84:0%:99:1E0:46:84:43:41:84 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:34 0/0:0:0:0:0:47:0%:89:1E0:46:47:28:19:48 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:31:0%:59:1E0:52:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:51:30:17:13:30 0/0:0:0:0:0:53:0%:99:1E0:51:53:31:22:53 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:43 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:11:19:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:50:0%:92:1E0:47:50:24:26:51 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:38 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:0:0:0:0:32:0%:59:1E0:48:32:20:12:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:16:0%:29:1E0:49:16:5:11:16 0/0:0:0:0:0:35:0%:67:1E0:51:35:20:15:35 0/0:0:0:0:0:59:0%:99:1E0:44:59:27:32:59 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:50:0%:92:1E0:45:50:29:21:50 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:41 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:36 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:10:19:30 0/0:0:0:0:0:50:0%:92:1E0:42:50:19:31:52 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:24:9:33 0/0:0:0:0:0:57:0%:99:1E0:43:57:31:26:59 0/0:0:0:0:0:59:0%:99:1E0:42:59:29:30:59 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:51:0%:97:1E0:40:51:24:27:54 0/0:0:0:0:0:46:0%:85:1E0:43:46:20:26:50 0/0:0:0:0:0:57:0%:99:1E0:44:57:31:26:57 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:48 0/0:0:0:0:0:50:0%:92:1E0:40:50:27:23:50 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:11:30:42 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:48 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:59:0%:99:1E0:39:59:28:31:59 0/0:0:0:0:0:54:0%:99:1E0:48:54:28:26:56 0/0:0:0:0:0:49:0%:93:1E0:44:49:19:30:49 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:41 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:34 0/0:0:0:0:0:52:0%:96:1E0:45:52:18:34:52 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:48:0%:89:1E0:43:48:20:28:49 MTB_anc 3596672 . T G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv3220c_Rv3220c|gene3296|transcript|Transcript_gene3296|Coding|1/1|c.863A>C|p.Asp288Ala|863/1506|863/1506|288/501||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3596672T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3596672T>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:42:54:22:32:55 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:55:0%:99:1E0:46:55:28:27:56 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:40:0%:74:1E0:49:40:21:19:41 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:34:0%:62:1E0:50:34:15:19:35 0/0:0:0:0:0:21:0%:40:1E0:49:21:8:13:21 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:20:0%:36:1E0:52:20:12:8:21 0/0:0:0:0:0:56:0%:99:1E0:48:56:22:34:57 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:26 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:32 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:54:0%:99:1E0:42:54:21:33:58 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:37 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:26 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:49 0/0:0:0:0:0:61:0%:99:1E0:48:61:30:31:62 0/0:0:0:0:0:46:0%:85:1E0:46:46:20:26:46 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:40 0/0:0:0:0:0:51:0%:97:1E0:42:51:31:20:55 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:47:28:9:19:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:37 0/0:0:0:0:0:55:0%:99:1E0:43:55:31:24:56 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:19:0%:37:1E0:50:19:14:5:19 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:12:20:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:59:0%:99:1E0:42:59:32:27:61 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:16:0%:29:1E0:45:16:6:10:16 0/0:0:0:0:0:51:0%:97:1E0:45:51:25:26:51 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:33 0/1:42:26:14:12:42:61.9%:99:4.7626E-11:43:16:11:5:44 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 0/0:0:0:0:0:51:0%:97:1E0:43:51:33:18:51 0/0:0:0:0:0:85:0%:99:1E0:45:85:46:39:85 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:32 0/0:0:0:0:0:45:0%:85:1E0:47:45:26:19:45 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:35:0%:67:1E0:51:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:51:29:16:13:29 0/0:0:0:0:0:43:0%:82:1E0:50:43:23:20:44 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:20:0%:36:1E0:48:20:7:13:20 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:33 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:41 0/0:0:0:0:0:54:0%:99:1E0:44:54:27:27:55 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:39 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:24 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:20:0%:36:1E0:47:20:6:14:20 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 0/0:0:0:0:0:57:0%:99:1E0:41:57:28:29:58 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:53:0%:99:1E0:44:53:30:23:53 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:43 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:17:0%:33:1E0:42:17:8:9:17 0/0:0:0:0:0:32:0%:59:1E0:49:32:13:19:33 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:30 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:47:0%:89:1E0:41:47:18:29:48 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:23:7:34 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:57 0/0:0:0:0:0:55:0%:99:1E0:41:55:26:29:56 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:50:0%:92:1E0:38:50:25:25:51 0/0:0:0:0:0:49:0%:93:1E0:41:49:22:27:50 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:58 0/0:0:0:0:0:45:0%:85:1E0:37:45:26:19:46 0/0:0:0:0:0:46:0%:85:1E0:40:46:26:20:46 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:12:31:44 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:46 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:54:0%:99:1E0:39:54:28:26:57 0/0:0:0:0:0:47:0%:89:1E0:46:47:24:23:47 0/0:0:0:0:0:43:0%:82:1E0:44:43:17:26:44 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:37 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:42 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:33 0/0:0:0:0:0:54:0%:99:1E0:42:54:17:37:55 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:48 MTB_anc 3597068 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv3220c_Rv3220c|gene3296|transcript|Transcript_gene3296|Coding|1/1|c.467T>G|p.Met156Arg|467/1506|467/1506|156/501||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3597068A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3597068A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:41:0%:78:1E0:48:41:15:26:41 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:36 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:40 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:19 0/0:0:0:0:0:32:0%:59:1E0:50:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:8:17:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:25:11:37 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:50:0%:92:1E0:41:50:19:31:51 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:39 0/0:0:0:0:0:20:0%:36:1E0:48:20:13:7:20 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:52:0%:96:1E0:45:52:24:28:53 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:25 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:33 0/0:0:0:0:0:37:0%:70:1E0:47:37:23:14:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:73:0%:99:1E0:46:73:35:38:75 0/0:0:0:0:0:56:0%:99:1E0:47:56:23:33:57 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:31 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:21:0%:40:1E0:50:21:6:15:21 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:43 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:52:0%:96:1E0:45:52:30:22:53 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:37 0/0:0:0:0:0:56:0%:99:1E0:46:56:29:27:57 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:39 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:34 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:51 0/0:0:0:0:0:78:0%:99:1E0:44:78:36:42:79 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:27 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:43 0/0:0:0:0:0:22:0%:40:1E0:49:22:12:10:22 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:41:0%:78:1E0:46:41:26:15:42 0/0:0:0:0:0:33:0%:63:1E0:52:33:13:20:33 0/1:46:17:7:10:31:54.84%:64:3.5853E-7:50:14:9:5:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:38 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:31 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:13:0%:25:1E0:53:13:10:3:13 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:49:31:20:11:31 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:53 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:53:0%:99:1E0:43:53:24:29:54 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:19 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:18 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:16:0%:29:1E0:44:16:6:10:17 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:37:0%:70:1E0:37:37:21:16:39 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:38 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:38 0/0:0:0:0:0:51:0%:97:1E0:44:51:23:28:51 0/0:0:0:0:0:55:0%:99:1E0:41:55:24:31:57 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:45 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:33 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:47 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:46 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:44 0/0:0:0:0:0:21:0%:40:1E0:38:21:14:7:22 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:45 0/0:0:0:0:0:30:0%:55:1E0:40:30:9:21:32 0/0:0:0:0:0:51:0%:97:1E0:41:51:21:30:51 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:46 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:48:0%:89:1E0:39:48:34:14:50 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:45 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:40 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:46 0/0:0:0:0:0:61:0%:99:1E0:44:61:38:23:61 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 MTB_anc 3599965 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|missense_variant|MODERATE|Rv3224_Rv3224|gene3301|transcript|Transcript_gene3301|Coding|1/1|c.115G>A|p.Ala39Thr|115/849|115/849|39/282||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3599965G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3599965G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:24 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:49 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 1/1:49:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 1/1:44:35:16:19:37:94.59%:99:4.2437E-19:48:2:0:2:40 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:16:26:42 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:20 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:38 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:29 0/0:0:0:0:0:33:0%:63:1E0:51:33:13:20:33 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 0/0:0:0:0:0:23:0%:44:1E0:47:23:6:17:23 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:38:0%:70:1E0:45:38:15:23:39 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:34 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:58:39:19:58:100%:99:1.6283E-34:0:0:0:0:62 0/0:0:0:0:0:43:0%:82:1E0:44:43:14:29:44 1/1:43:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:41 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:47 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:45 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:45 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:64:0%:99:1E0:40:64:35:29:65 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:33 1/1:44:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:38 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:25 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:41 0/0:36:1:1:0:102:0.98%:99:5E-1:45:101:46:55:104 0/0:0:0:0:0:36:0%:66:1E0:41:36:13:23:38 0/0:0:0:0:0:49:0%:93:1E0:43:49:16:33:50 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:39 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:55 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:45:0%:85:1E0:43:45:21:24:46 1/1:35:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:37 0/0:0:0:0:0:45:0%:85:1E0:45:45:18:27:48 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 1/1:46:26:15:11:27:96.3%:99:1.4382E-14:60:1:0:1:27 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:51:1:1:0:31:3.23%:48:5E-1:43:30:13:17:31 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:34 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:43 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:34 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:13 0/0:0:0:0:0:30:0%:55:1E0:51:30:17:13:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:44:0%:81:1E0:48:44:23:21:45 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:35 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:22 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:39 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:29 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:47 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:29 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:48 0/0:0:0:0:0:51:0%:97:1E0:44:51:25:26:53 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:25 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:52 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:32 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:48 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:15:29:45 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:33 0/0:0:0:0:0:43:0%:82:1E0:38:43:22:21:44 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:8:20:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:38 1/1:40:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:49 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:48 0/0:0:0:0:0:33:0%:63:1E0:38:33:9:24:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:30 0/0:39:1:1:0:33:3.03%:52:5E-1:43:32:15:17:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:48 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:19:0%:37:1E0:39:19:9:10:21 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:45:0%:85:1E0:44:45:17:28:45 1/1:42:40:25:15:41:97.56%:99:9.8874E-23:60:1:0:1:45 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:37 MTB_anc 3603355 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv3226c_Rv3226c-aroA_Rv3227|gene3303-gene3304|intergenic_region|gene3303-gene3304|||n.3603355G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:52:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:8:12:21:95.24%:99:4.0873E-11:38:1:1:0:22 1/1:44:33:18:15:34:97.06%:99:1.2301E-18:38:1:0:1:34 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:48:15:33:48:100%:99:1.554E-28:0:0:0:0:51 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:75:30:45:75:100%:99:1.0773E-44:0:0:0:0:76 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:50:16:34:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:72:34:38:72:100%:99:6.7558E-43:0:0:0:0:74 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:10:24:35:97.14%:99:3.2089E-19:38:1:1:0:36 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:51 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:41 1/1:36:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:24:7:17:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:26:9:17:27:96.3%:99:1.4382E-14:37:1:0:1:27 1/1:38:50:14:36:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:44:11:33:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 3610089 . AC A . PASS AC=18;AF=0.060;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3610090delC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3610090delC||||||,A|intragenic_variant|MODIFIER|Rv3233c_Rv3233c|gene3310|gene_variant|gene3310|||n.3610090delC||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:42:41:27:14:42 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:51:0%:97:1E0:46:51:22:29:52 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 1/1:45:28:16:12:29:96.55%:99:9.9776E-16:29:1:0:1:29 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:37 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:33 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:15 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 1/1:49:35:19:16:36:97.22%:99:8.3613E-20:37:1:1:0:36 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:47 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:25 0/0:0:0:0:0:68:0%:99:1E0:43:68:35:33:69 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:21:0%:40:1E0:54:21:14:7:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:55:0%:99:1E0:47:55:27:28:55 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:48:0%:89:1E0:45:48:26:22:49 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:38 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:23 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:38:0%:70:1E0:45:38:25:13:38 0/0:0:0:0:0:37:0%:70:1E0:45:37:13:24:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:23 0/0:0:0:0:0:40:0%:74:1E0:49:40:22:18:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:40:0%:74:1E0:46:40:28:12:40 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:59:0%:99:1E0:47:59:34:25:59 0/0:0:0:0:0:58:0%:99:1E0:47:58:36:22:58 0/0:0:0:0:0:52:0%:96:1E0:45:52:24:28:52 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:15 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:17 1/1:42:37:20:17:37:97.37%:99:5.6582E-21:33:1:1:0:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:42:0%:77:1E0:46:42:17:25:42 0/0:0:0:0:0:22:0%:40:1E0:51:22:10:12:24 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:40 0/0:0:0:0:0:53:0%:99:1E0:49:53:30:23:54 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:38 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:40 0/0:0:0:0:0:39:0%:74:1E0:48:39:23:16:40 0/0:0:0:0:0:74:0%:99:1E0:45:74:35:39:74 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:36 0/0:0:0:0:0:19:0%:37:1E0:52:19:11:8:19 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:24 0/0:0:0:0:0:39:0%:74:1E0:50:39:21:18:40 0/0:0:0:0:0:21:0%:40:1E0:51:21:9:12:21 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 1/1:51:33:20:13:34:97.06%:99:1.2301E-18:34:1:1:0:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:44 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:14:0%:25:1E0:43:14:11:3:14 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:28 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:40:0%:74:1E0:47:40:17:23:41 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:49:0%:93:1E0:43:49:21:28:49 0/0:0:0:0:0:29:0%:55:1E0:47:29:10:19:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:44 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:16:0%:29:1E0:49:16:10:6:17 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:39 0/0:0:0:0:0:47:0%:89:1E0:43:47:32:15:47 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:21:9:30 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:43 0/0:0:0:0:0:54:0%:99:1E0:41:54:32:22:55 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:25:0%:48:1E0:38:25:19:6:26 0/0:0:0:0:0:53:0%:99:1E0:43:53:19:34:53 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:48 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:32:0%:59:1E0:47:32:21:11:33 0/0:0:0:0:0:59:0%:99:1E0:40:59:29:30:59 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:39 0/0:0:0:0:0:52:0%:96:1E0:42:52:32:20:53 0/0:0:0:0:0:47:0%:89:1E0:38:47:21:26:50 0/0:0:0:0:0:48:0%:89:1E0:42:48:29:19:51 0/0:0:0:0:0:38:0%:70:1E0:37:38:21:17:40 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:41 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:31 0/0:0:0:0:0:44:0%:81:1E0:38:44:21:23:45 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:38 0/0:0:0:0:0:55:0%:99:1E0:40:55:29:26:55 0/0:0:0:0:0:34:0%:62:1E0:38:34:23:11:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:31 0/0:0:0:0:0:80:0%:99:1E0:41:80:42:38:82 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:31:11:43 1/1:44:52:25:27:52:98.11%:99:8.609E-30:39:1:1:0:53 0/0:0:0:0:0:27:0%:52:1E0:40:27:19:8:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 1/1:41:33:16:17:32:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:19 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:43:26:17:44:97.73%:99:1.7144E-24:35:1:1:0:45 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:52 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:38 MTB_anc 3614894 . C T . PASS AC=64;AF=0.213;AN=300;ANN=T|missense_variant|MODERATE|Rv3239c_Rv3239c|gene3316|transcript|Transcript_gene3316|Coding|1/1|c.2710G>A|p.Val904Ile|2710/3147|2710/3147|904/1048||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3614894C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3614894C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:42:48:24:24:49 0/0:0:0:0:0:10:0%:17:1E0:55:10:7:3:11 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:22 0/0:0:0:0:0:49:0%:93:1E0:48:49:27:22:49 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:22:10:34 0/0:0:0:0:0:39:0%:74:1E0:48:39:18:21:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:47:0%:89:1E0:43:47:30:17:48 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:19 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:52 1/1:40:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:19:0%:37:1E0:43:19:15:4:22 0/0:0:0:0:0:16:0%:29:1E0:42:16:11:5:16 0/0:35:1:0:1:28:3.57%:41:5E-1:47:27:14:13:28 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:32 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:14:0%:25:1E0:45:14:7:7:15 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:29 0/0:0:0:0:0:15:0%:29:1E0:40:15:7:8:15 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:60:0%:99:1E0:44:60:28:32:63 1/1:44:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:47 0/0:0:0:0:0:59:0%:99:1E0:44:59:29:30:60 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:40 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:23 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:24 0/0:0:0:0:0:41:0%:78:1E0:45:41:27:14:41 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:44 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:42 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:25 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:49 0/0:0:0:0:0:43:0%:82:1E0:42:43:28:15:44 1/1:44:30:13:17:31:96.77%:99:6.8754E-17:60:1:1:0:33 0/0:0:0:0:0:27:0%:52:1E0:41:27:21:6:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:23:15:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:46 0/0:0:0:0:0:100:0%:99:1E0:44:100:47:53:100 0/0:0:0:0:0:18:0%:32:1E0:50:18:9:9:18 0/0:0:0:0:0:25:0%:48:1E0:50:25:9:16:26 0/0:0:0:0:0:15:0%:29:1E0:46:15:11:4:16 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:31 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:50:29:15:14:30 0/0:0:0:0:0:43:0%:82:1E0:47:43:20:23:44 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:45 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 0/0:20:1:1:0:35:2.86%:55:5E-1:39:34:14:20:36 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:20 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:22 0/0:0:0:0:0:33:0%:63:1E0:49:33:19:14:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:49 0/0:39:1:1:0:24:4.17%:34:5E-1:41:23:16:7:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:41 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:28 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:26:7:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:27 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:44 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:42 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:26 0/0:60:1:0:1:27:3.7%:41:5E-1:43:26:11:15:29 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 0/0:0:0:0:0:53:0%:99:1E0:41:53:23:30:54 0/0:0:0:0:0:55:0%:99:1E0:42:55:29:26:55 0/0:36:1:1:0:33:3.03%:52:5E-1:41:32:9:23:33 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:29 0/0:0:0:0:0:49:0%:93:1E0:39:49:32:17:53 1/1:40:40:20:20:41:97.56%:99:9.8874E-23:60:1:1:0:44 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:42 1/1:37:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:42 1/1:37:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:44 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:49 1/1:38:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:44:0%:81:1E0:39:44:20:24:47 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:39 0/0:0:0:0:0:52:0%:96:1E0:41:52:19:33:58 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:59:0%:99:1E0:37:59:38:21:62 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:36 0/0:0:0:0:0:44:0%:81:1E0:41:44:28:16:45 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:37 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:52:0%:96:1E0:41:52:23:29:56 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 MTB_anc 3617655 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|intergenic_region|MODIFIER|Rv3239c_Rv3239c-secA1_Rv3240c|gene3316-gene3317|intergenic_region|gene3316-gene3317|||n.3617655C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:40:51:31:20:51 0/0:0:0:0:0:11:0%:22:1E0:43:11:9:2:11 0/0:0:0:0:0:50:0%:92:1E0:45:50:29:21:50 0/0:0:0:0:0:32:0%:59:1E0:45:32:24:8:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:23:6:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:17:5:24 0/0:0:0:0:0:23:0%:44:1E0:48:23:15:8:23 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:25:11:37 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:18:7:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:36 0/0:0:0:0:0:10:0%:17:1E0:47:10:8:2:11 0/0:0:0:0:0:51:0%:97:1E0:44:51:35:16:51 0/0:0:0:0:0:24:0%:44:1E0:39:24:18:6:24 0/0:0:0:0:0:28:0%:51:1E0:49:28:20:8:29 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:23 0/0:0:0:0:0:22:0%:40:1E0:42:22:18:4:22 0/0:0:0:0:0:15:0%:29:1E0:40:15:12:3:15 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:39:33:24:9:33 0/0:0:0:0:0:67:0%:99:1E0:42:67:45:22:67 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:21 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:24:12:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:20:8:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:21:0%:40:1E0:43:21:15:6:21 0/0:0:0:0:0:58:0%:99:1E0:42:58:40:18:60 0/0:0:0:0:0:36:0%:66:1E0:44:36:27:9:36 0/0:0:0:0:0:48:0%:89:1E0:44:48:32:16:48 0/0:0:0:0:0:41:0%:78:1E0:40:41:29:12:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:21:0%:40:1E0:39:21:14:7:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:19:5:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:8:16:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:23:10:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:42 0/0:0:0:0:0:53:0%:99:1E0:41:53:35:18:53 0/0:0:0:0:0:49:0%:93:1E0:42:49:29:20:49 0/0:0:0:0:0:16:0%:29:1E0:42:16:12:4:16 0/0:0:0:0:0:40:0%:74:1E0:41:40:30:10:41 0/0:0:0:0:0:22:0%:40:1E0:47:22:16:6:24 0/0:0:0:0:0:27:0%:52:1E0:40:27:23:4:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:22:3:27 0/0:0:0:0:0:48:0%:89:1E0:40:48:39:9:48 0/0:0:0:0:0:36:0%:66:1E0:38:36:30:6:36 0/0:0:0:0:0:18:0%:32:1E0:39:18:13:5:18 0/0:0:0:0:0:39:0%:74:1E0:42:39:27:12:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:25:13:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:40 0/0:32:1:1:0:42:2.38%:66:5E-1:42:41:27:14:42 0/0:0:0:0:0:42:0%:77:1E0:42:42:28:14:44 0/0:0:0:0:0:40:0%:74:1E0:42:40:29:11:41 0/0:0:0:0:0:72:0%:99:1E0:40:72:48:24:72 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:38 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:23 0/0:0:0:0:0:26:0%:47:1E0:46:26:18:8:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:21:8:31 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:41:0%:78:1E0:38:41:25:16:41 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:25 0/0:0:0:0:0:38:0%:70:1E0:40:38:28:10:39 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:27:13:42 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:29:7:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:27:9:37 0/0:0:0:0:0:24:0%:44:1E0:38:24:16:8:25 0/0:0:0:0:0:15:0%:29:1E0:44:15:12:3:16 0/0:0:0:0:0:30:0%:55:1E0:44:30:22:8:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:42:0%:77:1E0:39:42:26:16:44 0/0:0:0:0:0:28:0%:51:1E0:41:28:21:7:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:29:16:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:15:8:23 0/0:0:0:0:0:37:0%:70:1E0:39:37:24:13:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:23:10:33 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:34:0%:62:1E0:42:34:26:8:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:26 0/0:0:0:0:0:32:0%:59:1E0:38:32:26:6:32 0/0:0:0:0:0:21:0%:40:1E0:38:21:18:3:22 0/0:0:0:0:0:40:0%:74:1E0:44:40:26:14:42 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:43 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:37:0%:70:1E0:40:37:27:10:39 0/0:0:0:0:0:39:0%:74:1E0:39:39:27:12:39 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:25:10:35 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:22 0/0:0:0:0:0:54:0%:99:1E0:40:54:36:18:54 0/0:0:0:0:0:53:0%:99:1E0:41:53:28:25:54 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:42 0/0:0:0:0:0:39:0%:74:1E0:38:39:25:14:40 0/0:0:0:0:0:46:0%:85:1E0:39:46:32:14:47 0/0:0:0:0:0:52:0%:96:1E0:39:52:32:20:53 0/0:0:0:0:0:53:0%:99:1E0:38:53:34:19:53 1/1:39:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:40:0%:74:1E0:36:40:29:11:41 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:55:0%:99:1E0:40:55:39:16:57 0/0:0:0:0:0:41:0%:78:1E0:39:41:26:15:41 0/0:0:0:0:0:36:0%:66:1E0:38:36:23:13:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:26:9:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:30 0/0:0:0:0:0:49:0%:93:1E0:38:49:31:18:51 0/0:0:0:0:0:37:0%:70:1E0:38:37:27:10:38 0/0:0:0:0:0:41:0%:78:1E0:40:41:28:13:41 0/0:0:0:0:0:34:0%:62:1E0:39:34:27:7:34 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:23 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:39:35:25:10:35 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:24:0%:44:1E0:37:24:18:6:24 0/0:0:0:0:0:53:0%:99:1E0:41:53:37:16:53 0/0:0:0:0:0:44:0%:81:1E0:42:44:27:17:45 0/0:0:0:0:0:35:0%:67:1E0:38:35:26:9:37 MTB_anc 3618190 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|secA1_Rv3240c|gene3317|transcript|Transcript_gene3317|Coding|1/1|c.2342A>C|p.Glu781Ala|2342/2850|2342/2850|781/949||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.3618190T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3618190T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:57:0%:99:1E0:41:57:16:41:58 0/0:0:0:0:0:15:0%:29:1E0:50:15:7:8:15 0/0:0:0:0:0:57:0%:99:1E0:42:57:26:31:57 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:9:24:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:37:0%:70:1E0:50:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:34 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:42 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:8:25:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:22 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:28 0/0:0:0:0:0:55:0%:99:1E0:40:55:17:38:56 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:44 0/0:38:1:1:0:31:3.23%:48:5E-1:41:30:12:18:31 0/0:0:0:0:0:30:0%:55:1E0:50:30:15:15:30 0/0:0:0:0:0:18:0%:32:1E0:41:18:3:15:19 0/0:0:0:0:0:13:0%:25:1E0:49:13:5:8:13 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:24 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:27 0/0:0:0:0:0:24:0%:44:1E0:49:24:16:8:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:35 0/0:0:0:0:0:54:0%:99:1E0:41:54:21:33:55 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:42 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:35 0/0:0:0:0:0:55:0%:99:1E0:43:55:21:34:56 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:19 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:23:0%:44:1E0:39:23:5:18:23 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:60:1:1:0:26:3.85%:38:5E-1:50:25:11:14:27 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:51 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:29 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:16:0%:29:1E0:51:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:25 0/0:0:0:0:0:56:0%:99:1E0:39:56:22:34:59 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:37 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:29 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:11:25:36 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:51 0/0:0:0:0:0:76:0%:99:1E0:43:76:33:43:77 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:15:29:44 0/0:0:0:0:0:19:0%:37:1E0:47:19:4:15:19 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:50:25:15:10:26 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:23 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:9:23:32 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:46:0%:85:1E0:41:46:16:30:46 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:5:22:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:24 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:43 0/0:0:0:0:0:33:0%:63:1E0:44:33:10:23:33 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:43 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:36 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:8:23:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:39:0%:74:1E0:38:39:17:22:39 0/0:0:0:0:0:33:0%:63:1E0:46:33:11:22:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:19:0%:37:1E0:47:19:6:13:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:9:25:35 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:42 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:34:0%:62:1E0:38:34:10:24:34 0/0:0:0:0:0:45:0%:85:1E0:38:45:15:30:46 0/0:0:0:0:0:54:0%:99:1E0:39:54:16:38:56 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 1/1:40:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:58:0%:99:1E0:39:58:20:38:59 0/0:0:0:0:0:46:0%:85:1E0:38:46:13:33:46 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:48 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:40 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:36 0/0:0:0:0:0:48:0%:89:1E0:39:48:22:26:49 0/0:0:0:0:0:39:0%:74:1E0:37:39:21:18:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:36 0/0:0:0:0:0:47:0%:89:1E0:41:47:20:27:49 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:50 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:37 0/0:0:0:0:0:26:0%:47:1E0:36:26:7:19:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:26 0/0:0:0:0:0:51:0%:97:1E0:38:51:19:32:51 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:42 0/0:0:0:0:0:53:0%:99:1E0:42:53:22:31:55 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:41 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:7:22:31 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:40:0%:74:1E0:39:40:13:27:40 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:20 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:9:21:30 0/0:0:0:0:0:50:0%:92:1E0:41:50:27:23:53 0/0:0:0:0:0:33:0%:63:1E0:40:33:6:27:34 MTB_anc 3621145 . A C . PASS AC=4;AF=0.013;AN=300;ANN=C|missense_variant|MODERATE|Rv3241c_Rv3241c|gene3318|transcript|Transcript_gene3318|Coding|1/1|c.110T>G|p.Leu37Arg|110/645|110/645|37/214||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3621145A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3621145A>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:41 0/0:0:0:0:0:21:0%:40:1E0:51:21:14:7:21 0/0:0:0:0:0:54:0%:99:1E0:45:54:24:30:54 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:37 0/0:0:0:0:0:35:0%:67:1E0:49:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:25:0%:48:1E0:51:25:17:8:25 0/0:0:0:0:0:31:0%:59:1E0:48:31:14:17:33 0/0:0:0:0:0:38:0%:70:1E0:46:38:24:14:39 0/0:0:0:0:0:36:0%:66:1E0:47:36:23:13:36 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:56:0%:99:1E0:44:56:22:34:57 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:31 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:51 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:49:37:21:16:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:18 0/0:60:1:1:0:23:4.35%:34:5E-1:49:22:10:12:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:36 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:20 0/0:0:0:0:0:42:0%:77:1E0:47:42:26:16:42 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:24 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:34 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:65:0%:99:1E0:46:65:32:33:65 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:41 0/0:0:0:0:0:51:0%:97:1E0:47:51:29:22:52 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:43 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:43 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:23 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:44 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:44:0%:81:1E0:47:44:27:17:44 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:12:24:36 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:36:0%:66:1E0:45:36:10:26:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:38 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:35 0/0:0:0:0:0:52:0%:96:1E0:45:52:21:31:52 0/0:0:0:0:0:79:0%:99:1E0:47:79:41:38:80 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:47:0%:89:1E0:50:47:24:23:47 0/0:0:0:0:0:35:0%:67:1E0:50:35:15:20:35 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:36 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:30 0/0:0:0:0:0:19:0%:37:1E0:46:19:14:5:20 0/0:0:0:0:0:37:0%:70:1E0:48:37:15:22:38 0/0:0:0:0:0:50:0%:92:1E0:48:50:18:32:51 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:29 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:21 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:26:0%:47:1E0:48:26:9:17:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:10:25:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:17 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:24 0/0:0:0:0:0:68:0%:99:1E0:43:68:34:34:69 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:51:0%:97:1E0:43:51:28:23:52 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:35 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:23:11:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:39 0/0:0:0:0:0:52:0%:96:1E0:43:52:26:26:52 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:29 1/1:40:19:8:11:20:95%:98:1.5234E-10:38:1:1:0:20 1/1:41:69:34:35:69:100%:99:4.233E-41:0:0:0:0:69 0/0:0:0:0:0:65:0%:99:1E0:44:65:32:33:65 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:31 0/0:0:0:0:0:66:0%:99:1E0:39:66:37:29:67 0/0:0:0:0:0:31:0%:59:1E0:40:31:21:10:35 0/0:0:0:0:0:55:0%:99:1E0:40:55:26:29:57 0/0:0:0:0:0:45:0%:85:1E0:37:45:21:24:49 0/0:0:0:0:0:49:0%:93:1E0:40:49:21:28:50 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:47 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:41 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:43:0%:82:1E0:39:43:25:18:47 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:40 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:71:0%:99:1E0:39:71:31:40:71 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:49:0%:93:1E0:43:49:17:32:50 0/0:0:0:0:0:46:0%:85:1E0:44:46:28:18:47 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:49 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:55:0%:99:1E0:42:55:26:29:56 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 MTB_anc 3624486 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|lpqB_Rv3244c|gene3321|transcript|Transcript_gene3321|Coding|1/1|c.425G>A|p.Gly142Asp|425/1752|425/1752|142/583||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3624486C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3624486C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:51:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:63:29:34:63:100%:99:1.657E-37:0:0:0:0:64 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:50:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:73:34:39:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:53:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:63:34:29:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:53:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:33 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:39 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:62:42:20:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 3626718 . T C . PASS AC=4;AF=0.013;AN=300;ANN=C|missense_variant|MODERATE|mtrA_Rv3246c|gene3323|transcript|Transcript_gene3323|Coding|1/1|c.632A>G|p.Asn211Ser|632/687|632/687|211/228||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3626718T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3626718T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3626718T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:15:0%:29:1E0:47:15:8:7:15 0/0:0:0:0:0:47:0%:89:1E0:46:47:18:29:48 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:10:18:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:38:0%:70:1E0:52:38:15:23:39 0/0:0:0:0:0:39:0%:74:1E0:49:39:17:22:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:22:0%:40:1E0:49:22:11:11:25 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:47 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:24:0%:44:1E0:49:24:7:17:24 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:33 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:46 0/0:0:0:0:0:31:0%:59:1E0:52:31:17:14:31 0/0:0:0:0:0:43:0%:82:1E0:48:43:21:22:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:9:27:38 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:32 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:33 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:53:0%:99:1E0:45:53:22:31:55 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:40 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:40:0%:74:1E0:48:40:23:17:40 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:30:0%:55:1E0:40:30:9:21:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:48 0/0:0:0:0:0:53:0%:99:1E0:43:53:30:23:54 0/0:0:0:0:0:36:0%:66:1E0:46:36:25:11:37 0/0:0:0:0:0:17:0%:33:1E0:50:17:8:9:17 1/1:42:49:17:32:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:54:0%:99:1E0:42:54:24:30:54 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:43 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:11:24:35 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:53 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:45:0%:85:1E0:47:45:24:21:47 0/0:0:0:0:0:74:0%:99:1E0:47:74:33:41:74 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:39 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:19 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:51:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:35 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:23 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:28 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:42 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:33 0/0:0:0:0:0:40:0%:74:1E0:49:40:18:22:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:31 0/0:0:0:0:0:44:0%:81:1E0:47:44:27:17:45 0/0:0:0:0:0:28:0%:51:1E0:51:28:8:20:28 0/0:0:0:0:0:61:0%:99:1E0:40:61:36:25:62 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:50:0%:92:1E0:47:50:26:24:50 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:21 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:46:0%:85:1E0:40:46:19:27:47 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:37 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:22:8:31 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:40 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:50 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:44 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:44 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:62:0%:99:1E0:42:62:26:36:62 0/0:0:0:0:0:60:0%:99:1E0:41:60:29:31:61 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:32 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:46 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:47 0/0:0:0:0:0:47:0%:89:1E0:38:47:26:21:51 0/0:0:0:0:0:38:0%:70:1E0:40:38:13:25:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:45 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:46 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:33 0/0:0:0:0:0:55:0%:99:1E0:38:55:19:36:57 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:43 0/0:0:0:0:0:51:0%:97:1E0:44:51:31:20:52 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:52 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:41 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:54 0/0:0:0:0:0:38:0%:70:1E0:40:38:16:22:39 MTB_anc 3637168 . G A . PASS AC=12;AF=0.040;AN=300;ANN=A|missense_variant|MODERATE|Rv3256c_Rv3256c|gene3333|transcript|Transcript_gene3333|Coding|1/1|c.148C>T|p.Arg50Cys|148/1041|148/1041|50/346||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3637168G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3637168G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3637168G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:41:45:17:28:46 0/0:0:0:0:0:16:0%:29:1E0:52:16:8:8:17 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:36:23:10:13:25 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:23 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:23 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:40 0/0:0:0:0:0:10:0%:17:1E0:48:10:4:6:10 0/0:0:0:0:0:49:0%:93:1E0:39:49:23:26:51 0/0:0:0:0:0:20:0%:36:1E0:43:20:5:15:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:19 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:18 0/0:0:0:0:0:13:0%:25:1E0:44:13:8:5:14 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:44 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:38 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:33 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:0:0:0:0:26:0%:47:1E0:36:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:23:16:39 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:40 0/0:0:0:0:0:41:0%:78:1E0:39:41:22:19:42 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:39:1:0:1:31:3.23%:48:5E-1:44:30:11:19:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:27 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:46 0/0:0:0:0:0:44:0%:81:1E0:38:44:18:26:44 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:14:0%:25:1E0:48:14:9:5:14 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:25 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:48 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:28 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:48 0/0:0:0:0:0:61:0%:99:1E0:43:61:35:26:66 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:24 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:15:0%:29:1E0:44:15:7:8:17 0/0:0:0:0:0:19:0%:37:1E0:50:19:6:13:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:50:29:11:18:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:51:0%:97:1E0:39:51:26:25:54 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:32 0/0:0:0:0:0:38:0%:70:1E0:38:38:14:24:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:35 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:19 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:40 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:21 0/0:0:0:0:0:45:0%:85:1E0:41:45:17:28:47 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:33 1/1:43:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:32:0%:59:1E0:38:32:11:21:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:29 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:17 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:14:20:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:32 0/0:0:0:0:0:17:0%:33:1E0:39:17:10:7:17 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:20 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:27 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:11:17:31 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:44 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:20 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:39 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:49 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:25 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:37 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:24 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:30 0/0:0:0:0:0:35:0%:67:1E0:37:35:16:19:37 0/0:0:0:0:0:37:0%:70:1E0:36:37:14:23:41 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:36 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:39 0/0:0:0:0:0:35:0%:67:1E0:37:35:16:19:37 0/0:0:0:0:0:35:0%:67:1E0:36:35:18:17:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:26 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:14 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:39:0%:74:1E0:37:39:18:21:40 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:31 0/0:0:0:0:0:31:0%:59:1E0:40:31:9:22:32 0/0:0:0:0:0:38:0%:70:1E0:38:38:17:21:38 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:31 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:17 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:26 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:26 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:30 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:15 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:37 0/0:38:1:1:0:45:2.22%:73:5E-1:40:44:20:24:47 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:36 MTB_anc 3637223 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv3256c_Rv3256c|gene3333|transcript|Transcript_gene3333|Coding|1/1|c.93C>T|p.Gly31Gly|93/1041|93/1041|31/346||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3637223G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3637223G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3637223G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:15:35:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:24:15:9:25:96%:99:3.101E-14:0:0:0:0:25 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:37:18:19:38:97.37%:99:5.6582E-21:37:1:1:0:38 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:36:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:48:17:31:49:97.96%:99:1.9625E-27:31:1:0:1:49 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 MTB_anc 3637833 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|pmmA_Rv3257c|gene3334|transcript|Transcript_gene3334|Coding|1/1|c.877G>A|p.Ala293Thr|877/1398|877/1398|293/465||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3637833C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3637833C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:57:0%:99:1E0:43:57:29:28:58 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:24 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:41 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:33 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:52:33:16:17:33 0/0:0:0:0:0:18:0%:32:1E0:44:18:12:6:18 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:30 0/0:0:0:0:0:20:0%:36:1E0:51:20:10:10:20 0/0:0:0:0:0:57:0%:99:1E0:45:57:29:28:58 0/0:0:0:0:0:22:0%:40:1E0:51:22:14:8:23 0/0:0:0:0:0:44:0%:81:1E0:49:44:21:23:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:35 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:18:28:46 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:40 0/0:0:0:0:0:37:0%:70:1E0:45:37:25:12:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:26:0%:47:1E0:47:26:18:8:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:20:9:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:27 0/0:0:0:0:0:40:0%:74:1E0:46:40:27:13:40 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:25 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:34:0%:62:1E0:48:34:15:19:35 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:56:0%:99:1E0:46:56:29:27:56 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:50 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:49 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:48:0%:89:1E0:42:48:30:18:48 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:63:0%:99:1E0:44:63:37:26:63 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:44:0%:81:1E0:47:44:26:18:44 0/0:0:0:0:0:27:0%:52:1E0:50:27:14:13:28 0/0:0:0:0:0:46:0%:85:1E0:47:46:27:19:46 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:20 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:40 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:43 0/0:0:0:0:0:31:0%:59:1E0:50:31:16:15:31 0/0:0:0:0:0:52:0%:96:1E0:43:52:26:26:52 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:26:25:52 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:48 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:49:0%:93:1E0:49:49:30:19:49 0/0:0:0:0:0:74:0%:99:1E0:47:74:33:41:74 0/0:0:0:0:0:27:0%:52:1E0:43:27:19:8:27 0/0:31:1:1:0:38:2.63%:58:5E-1:46:37:21:16:38 0/0:0:0:0:0:20:0%:36:1E0:47:20:17:3:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:29:0%:55:1E0:50:29:16:13:29 0/0:60:1:0:1:32:3.12%:48:5E-1:47:31:10:21:32 0/0:0:0:0:0:26:0%:47:1E0:52:26:18:8:26 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:45 0/0:0:0:0:0:47:0%:89:1E0:45:47:24:23:47 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:36 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:50 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:19:8:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:21:9:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:29:13:43 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:34:0%:62:1E0:50:34:16:18:34 0/0:0:0:0:0:27:0%:52:1E0:50:27:16:11:28 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:28 0/0:0:0:0:0:28:0%:51:1E0:54:28:13:15:28 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:48 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:43 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:35 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:33:1:0:1:22:4.55%:31:5E-1:38:21:7:14:24 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:50:0%:92:1E0:45:50:29:21:51 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:30 0/0:0:0:0:0:24:0%:44:1E0:50:24:11:13:25 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:20 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:36 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:33 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:62:36:26:62:100%:99:6.5755E-37:0:0:0:0:62 0/0:0:0:0:0:54:0%:99:1E0:44:54:29:25:54 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:32 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:20 0/0:0:0:0:0:53:0%:99:1E0:37:53:26:27:53 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:39 0/0:0:0:0:0:63:0%:99:1E0:43:63:31:32:63 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:48 0/0:0:0:0:0:38:0%:70:1E0:37:38:22:16:40 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:37 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:50 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:48:0%:89:1E0:42:48:28:20:49 0/0:0:0:0:0:40:0%:74:1E0:40:40:24:16:40 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:42 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:30 0/0:0:0:0:0:48:0%:89:1E0:40:48:19:29:49 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:46 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:51:0%:97:1E0:41:51:24:27:53 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:38:0%:70:1E0:46:38:21:17:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:60:0%:99:1E0:42:60:34:26:61 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 MTB_anc 3638093 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|pmmA_Rv3257c|gene3334|transcript|Transcript_gene3334|Coding|1/1|c.617T>C|p.Leu206Ser|617/1398|617/1398|206/465||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3638093A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3638093A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:60:29:31:60:100%:99:1.035E-35:0:0:0:0:61 1/1:51:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:11:16:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:46:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:46:23:23:47:97.87%:99:2.9526E-26:60:1:1:0:47 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:78:33:45:79:98.73%:99:1.7165E-46:0:0:0:0:80 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:22:14:8:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:55:28:27:56:98.21%:99:1.0149E-32:0:0:0:0:56 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:13:17:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:21:19:41:97.56%:99:9.8874E-23:60:1:0:1:41 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:48:24:24:49:97.96%:99:1.9625E-27:37:1:0:1:50 1/1:43:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:38:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:37:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:31:16:15:32:96.88%:99:1.8007E-17:37:1:0:1:37 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 3644579 . G A . PASS AC=40;AF=0.133;AN=300;ANN=A|missense_variant|MODERATE|Rv3263_Rv3263|gene3340|transcript|Transcript_gene3340|Coding|1/1|c.1403G>A|p.Ser468Asn|1403/1662|1403/1662|468/553||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3644579G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3644579G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:40 0/0:0:0:0:0:20:0%:36:1E0:50:20:13:7:20 0/0:0:0:0:0:53:0%:99:1E0:47:53:24:29:54 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:22:0%:40:1E0:42:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:43 0/0:0:0:0:0:9:0%:18:1E0:46:9:5:4:9 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:19 0/0:0:0:0:0:21:0%:40:1E0:50:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:57:0%:99:1E0:42:57:25:32:57 0/0:0:0:0:0:37:0%:70:1E0:49:37:16:21:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:26 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:18:9:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 1/1:44:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:30 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 1/1:45:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 0/0:0:0:0:0:45:0%:85:1E0:49:45:20:25:45 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:49 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:51:0%:97:1E0:42:51:32:19:51 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:36 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:29 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:21 0/0:0:0:0:0:57:0%:99:1E0:42:57:35:22:59 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:47:0%:89:1E0:41:47:17:30:47 0/0:0:0:0:0:44:0%:81:1E0:48:44:19:25:45 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:48:0%:89:1E0:43:48:22:26:48 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:82:0%:99:1E0:45:82:44:38:82 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:17:0%:33:1E0:44:17:7:10:17 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:40:0%:74:1E0:39:40:14:26:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:20:9:29 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:29:0%:55:1E0:49:29:21:8:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:8:18:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:34 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:35 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:36 0/0:0:0:0:0:34:0%:62:1E0:51:34:16:18:34 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:17:28:47 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:49:2:2:0:37:5.41%:50:2.4658E-1:42:35:20:15:37 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:36:0%:66:1E0:39:36:23:13:37 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:32 0/0:38:1:1:0:50:2%:80:5E-1:42:49:20:29:51 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:38 0/0:0:0:0:0:54:0%:99:1E0:38:54:27:27:56 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:35 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:42 0/0:0:0:0:0:57:0%:99:1E0:42:57:30:27:57 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:39:36:12:24:37 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:48 0/0:0:0:0:0:56:0%:99:1E0:41:56:29:27:57 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:39 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:41 0/0:0:0:0:0:29:0%:55:1E0:35:29:17:12:30 0/0:0:0:0:0:37:0%:70:1E0:40:37:12:25:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:34 0/0:0:0:0:0:57:0%:99:1E0:41:57:41:16:58 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:44 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 1/1:37:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:24:17:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:16:32:48 0/0:0:0:0:0:48:0%:89:1E0:43:48:21:27:48 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:41 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:55 0/0:0:0:0:0:43:0%:82:1E0:43:43:21:22:43 MTB_anc 3647041 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|rmlD_Rv3266c|gene3343|transcript|Transcript_gene3343|Coding|1/1|c.769C>T|p.Pro257Ser|769/915|769/915|257/304||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3647041G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3647041G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:59:40:19:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:60:29:31:60:100%:99:1.035E-35:0:0:0:0:61 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:66:37:29:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:54:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:30:5:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 3658266 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|purE_Rv3275c|gene3352|transcript|Transcript_gene3352|Coding|1/1|c.373C>G|p.Arg125Gly|373/525|373/525|125/174||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.3658266G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3658266G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:54:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:17:14:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:46:49:26:23:50:98%:99:3.925E-29:0:0:0:0:50 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:63:32:31:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:40:16:24:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:36:15:21:37:97.3%:99:2.2598E-21:0:0:0:0:39 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:19:13:6:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:66:32:34:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:20:12:8:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:36:19:17:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:63:23:40:63:100%:99:1.657E-37:0:0:0:0:63 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 3661340 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|birA_Rv3279c|gene3356|transcript|Transcript_gene3356|Coding|1/1|c.673G>A|p.Val225Ile|673/801|673/801|225/266||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3661340C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3661340C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:70:45:25:70:100%:99:1.0659E-41:0:0:0:0:73 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:22:11:11:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:30:18:12:31:96.77%:99:6.8754E-17:36:1:1:0:31 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 MTB_anc 3663701 . C CCCTGTGAGTCGAGTGAGCGGAACGAA . PASS AC=149;AF=0.497;AN=300;ANN=CCCTGTGAGTCGAGTGAGCGGAACGAA|frameshift_variant&stop_gained|HIGH|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.41_66dupCTGTGAGTCGAGTGAGCGGAACGAAC|p.Glu23fs|67/534|67/534|23/177||INFO_REALIGN_3_PRIME,CCCTGTGAGTCGAGTGAGCGGAACGAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663701_3663702insCCTGTGAGTCGAGTGAGCGGAACGAA||||||,CCCTGTGAGTCGAGTGAGCGGAACGAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663701_3663702insCCTGTGAGTCGAGTGAGCGGAACGAA||||||,CCCTGTGAGTCGAGTGAGCGGAACGAA|intragenic_variant|MODIFIER|accD5_Rv3280|gene3357|gene_variant|gene3357|||n.3663729_3663754dupCTGTGAGTCGAGTGAGCGGAACGAAC||||||;HOM=0;LOF=(accE5_Rv3281|gene3358|1|1.00);NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:46:24:14:10:48:50%:89:1.2355E-9:41:24:15:9:49 0/0:43:4:2:2:13:30.77%:6:4.7826E-2:44:9:3:6:13 0/1:49:18:13:5:44:40.91%:63:4.2568E-7:40:26:14:12:46 0/1:53:10:5:5:22:45.45%:36:2.1796E-4:47:10:3:7:22 0/1:45:13:10:3:27:48.15%:47:1.81E-5:44:14:5:9:27 0/1:53:11:6:5:27:40.74%:38:1.362E-4:46:16:5:11:27 0/1:50:12:4:8:31:38.71%:42:6.1809E-5:42:18:11:7:31 0/1:45:12:5:7:26:46.15%:43:4.6796E-5:43:14:7:7:27 0/1:47:10:1:9:27:37.04%:34:3.5253E-4:49:17:7:10:27 0/1:49:14:7:7:30:46.67%:51:7.6466E-6:44:15:6:9:30 0/1:50:14:6:8:24:58.33%:53:4.0663E-6:40:10:4:6:25 0/1:43:23:9:14:36:60.53%:92:5.9342E-10:39:13:5:8:38 0/1:50:7:5:2:14:46.67%:25:3.1609E-3:44:8:5:3:15 0/1:45:26:14:12:43:60.47%:99:5.8338E-11:44:17:4:13:44 0/1:52:17:8:9:28:60.71%:66:2.1913E-7:43:11:4:7:28 0/1:47:17:9:8:34:48.57%:63:4.6376E-7:44:16:10:6:35 0/1:50:10:7:3:23:43.48%:35:2.8066E-4:43:13:6:7:23 0/1:43:7:2:5:23:29.17%:23:4.5803E-3:41:16:9:7:24 0/1:46:8:3:5:21:38.1%:27:1.7241E-3:44:13:3:10:21 0/1:49:11:3:8:23:47.83%:40:9.1981E-5:43:11:4:7:24 0/1:46:13:9:4:27:46.43%:47:1.9812E-5:39:15:7:8:28 0/1:46:16:8:8:39:41.03%:56:2.1927E-6:41:23:13:10:39 0/1:55:11:7:4:25:44%:40:9.1981E-5:48:11:5:6:26 0/1:51:16:7:9:37:43.24%:57:1.7753E-6:39:20:9:11:37 0/1:48:13:7:6:33:39.39%:45:2.8029E-5:41:20:8:12:34 0/1:44:7:4:3:27:25.93%:23:4.9169E-3:46:19:9:10:27 0/1:43:10:7:3:25:38.46%:35:2.9985E-4:39:14:7:7:26 0/1:44:10:6:4:24:41.67%:35:2.9985E-4:42:14:9:5:24 0/1:50:15:6:9:21:71.43%:62:5.4994E-7:45:6:3:3:22 0/1:50:15:4:11:31:48.39%:54:3.2298E-6:41:16:8:8:33 0/1:48:18:9:9:37:48.65%:66:2.1904E-7:43:18:7:11:37 0/1:43:11:5:6:28:39.29%:38:1.362E-4:39:16:7:9:29 0/1:50:20:7:13:35:57.14%:76:2.0063E-8:43:15:5:10:35 0/1:43:10:6:4:32:31.25%:33:4.259E-4:39:22:11:11:33 0/1:44:17:10:7:28:58.62%:65:2.627E-7:45:12:7:5:29 0/1:43:15:5:10:30:50%:55:2.9161E-6:40:15:9:6:30 0/1:48:21:11:10:34:61.76%:83:4.9442E-9:40:13:2:11:35 0/1:50:35:15:20:49:70%:99:2.0554E-15:41:15:7:8:50 0/1:49:15:5:10:31:48.39%:54:3.2298E-6:45:16:8:8:32 0/1:47:27:11:16:49:55.1%:99:4.1928E-11:40:21:13:8:49 0/1:48:18:9:9:35:51.43%:68:1.5143E-7:37:15:7:8:36 0/1:45:20:12:8:41:48.78%:74:3.8991E-8:42:20:8:12:42 0/1:47:9:6:3:24:37.5%:31:7.0165E-4:43:13:6:7:25 0/1:46:17:6:11:29:58.62%:65:2.627E-7:40:12:7:5:29 0/1:45:13:4:9:32:39.39%:45:2.8029E-5:40:20:11:9:33 0/1:49:13:6:7:29:44.83%:46:2.1506E-5:38:16:8:8:29 0/1:46:14:4:10:31:45.16%:50:9.1194E-6:40:17:9:8:32 0/1:39:9:3:6:25:34.62%:30:8.4928E-4:40:17:9:8:28 0/1:44:16:10:6:36:44.44%:58:1.364E-6:43:17:8:9:37 0/1:51:17:9:8:40:42.5%:60:8.743E-7:46:23:12:11:41 0/1:35:6:3:3:19:30%:20:9.828E-3:43:13:6:7:19 0/1:47:18:10:8:36:50%:67:1.7305E-7:41:16:7:9:38 0/1:54:12:5:7:22:52.17%:44:3.4748E-5:51:11:6:5:23 0/1:49:17:7:10:37:43.59%:60:8.1342E-7:41:22:12:10:39 0/1:39:15:6:9:30:46.88%:54:3.5464E-6:37:17:8:9:32 0/1:44:25:16:9:54:46.3%:91:7.7765E-10:41:29:12:17:55 0/1:40:15:8:7:37:40.54%:52:5.1339E-6:43:22:12:10:38 0/1:46:12:7:5:27:44.44%:42:5.0681E-5:39:15:7:8:28 0/1:45:23:12:11:47:47.92%:84:3.6075E-9:42:25:11:14:49 0/1:52:16:12:4:41:39.02%:56:2.4696E-6:41:25:14:11:42 0/1:47:18:9:9:35:51.43%:67:1.9562E-7:43:17:10:7:36 0/1:39:19:13:6:31:55.88%:72:5.5375E-8:42:15:4:11:36 0/1:46:19:13:6:40:47.5%:69:1.1326E-7:39:21:9:12:41 0/1:48:17:5:12:27:60.71%:66:2.1913E-7:38:11:9:2:28 0/1:48:14:3:11:36:37.84%:48:1.3393E-5:41:23:16:7:37 0/1:46:29:18:11:65:43.94%:99:2.9719E-11:42:35:14:21:68 0/1:43:14:12:2:30:46.67%:50:8.3837E-6:43:16:9:7:30 0/1:46:22:13:9:45:47.83%:81:7.724E-9:39:23:8:15:46 0/1:49:10:6:4:19:52.63%:37:1.9541E-4:46:9:6:3:19 0/1:47:11:7:4:28:39.29%:38:1.362E-4:53:16:8:8:28 0/1:48:23:14:9:41:56.1%:88:1.5244E-9:45:18:6:12:42 0/1:49:15:7:8:26:57.69%:57:1.7241E-6:43:11:5:6:26 0/1:47:15:11:4:24:62.5%:59:1.196E-6:47:9:3:6:24 0/1:51:17:5:12:32:53.12%:63:4.1013E-7:48:15:8:7:32 0/1:44:20:10:10:40:50%:74:3.8991E-8:42:20:13:7:41 0/1:54:8:4:4:21:38.1%:27:1.638E-3:43:12:8:4:22 0/1:50:17:12:5:36:47.22%:62:5.7598E-7:40:18:8:10:38 0/1:49:18:10:8:33:54.55%:68:1.5143E-7:44:15:10:5:33 0/1:46:16:8:8:31:50%:59:1.0995E-6:42:15:5:10:32 0/1:47:14:7:7:31:45.16%:50:9.1194E-6:39:17:10:7:31 0/1:43:10:6:4:36:27.03%:33:4.8486E-4:44:27:16:11:37 0/1:49:27:15:12:41:65.85%:99:1.0249E-11:40:14:10:4:41 0/1:49:15:9:6:33:44.12%:53:4.1835E-6:40:19:9:10:34 0/1:49:15:6:9:27:55.56%:56:2.0087E-6:46:12:5:7:27 0/1:50:13:4:9:32:40.62%:46:2.4825E-5:38:18:11:7:34 0/1:43:12:4:8:28:42.86%:42:5.4482E-5:39:16:7:9:28 0/1:45:14:7:7:29:45.16%:50:8.3837E-6:39:16:9:7:30 0/1:54:8:6:2:27:29.63%:26:2.1337E-3:48:19:14:5:27 0/1:53:12:5:7:31:38.71%:42:5.8193E-5:43:17:10:7:31 0/1:49:12:2:10:28:42.86%:42:5.0681E-5:43:15:5:10:28 0/1:50:11:4:7:25:44%:39:1.1933E-4:42:14:6:8:25 0/1:53:12:5:7:27:44.44%:43:4.6796E-5:47:14:8:6:28 0/1:44:21:11:10:45:46.67%:76:2.2206E-8:39:24:11:13:47 0/1:50:19:7:12:40:47.5%:69:1.1326E-7:41:21:11:10:40 0/1:51:18:12:6:37:48.65%:66:2.432E-7:40:19:10:9:40 0/1:44:12:6:6:30:40%:42:5.8193E-5:41:17:8:9:31 0/1:44:17:10:7:33:50%:62:5.1914E-7:41:17:8:9:37 0/1:47:18:6:12:38:47.37%:65:2.68E-7:40:20:9:11:39 0/1:46:21:10:11:37:56.76%:80:8.5014E-9:42:16:7:9:39 0/1:39:18:10:8:41:41.86%:63:3.9871E-7:40:25:11:14:43 0/1:48:11:4:7:22:50%:40:9.1981E-5:47:11:3:8:23 0/1:41:17:5:12:33:50%:62:5.1914E-7:38:17:6:11:34 0/1:47:12:9:3:24:48%:43:4.2836E-5:36:13:6:7:28 0/1:46:10:5:5:21:47.62%:36:2.3971E-4:42:11:6:5:23 0/1:46:16:8:8:26:61.54%:62:5.1256E-7:35:10:8:2:28 0/1:50:15:9:6:29:51.72%:55:2.6068E-6:42:14:7:7:29 0/1:47:23:12:11:39:58.97%:89:1.093E-9:43:16:9:7:39 0/1:48:16:3:13:39:41.03%:56:2.0535E-6:41:22:9:13:41 0/1:47:18:11:7:40:45%:64:3.1919E-7:43:22:9:13:40 0/1:48:13:8:5:24:52%:48:1.4654E-5:38:12:6:6:25 0/1:46:15:7:8:37:40.54%:53:4.8188E-6:39:21:10:11:38 0/1:55:14:8:6:35:40%:49:1.2005E-5:42:21:14:7:36 0/1:49:16:8:8:26:61.54%:62:5.1256E-7:37:10:7:3:27 0/1:44:18:9:9:34:51.43%:68:1.5143E-7:42:15:9:6:34 0/1:42:18:7:11:36:48.65%:66:2.432E-7:38:19:12:7:40 0/1:44:22:16:6:44:50%:81:6.9407E-9:39:22:13:9:46 0/1:46:17:10:7:37:44.74%:61:7.5297E-7:38:21:8:13:40 0/1:49:17:11:6:32:53.12%:63:4.1013E-7:35:15:6:9:33 0/1:39:15:12:3:25:53.57%:56:2.3037E-6:41:13:6:7:28 0/1:46:36:21:15:56:63.16%:99:3.5316E-15:41:21:12:9:57 0/1:44:28:19:9:52:52.83%:99:2.7227E-11:39:25:14:11:53 0/1:49:6:2:4:15:40%:20:8.4291E-3:39:9:3:6:15 0/1:44:22:15:7:32:64.71%:88:1.3675E-9:39:12:7:5:35 0/1:40:18:10:8:51:34.62%:62:6.1577E-7:36:33:15:18:52 0/1:39:16:9:7:34:45.71%:57:1.637E-6:37:19:11:8:35 0/1:42:21:12:9:47:42.86%:75:2.8521E-8:39:27:10:17:50 0/1:43:29:17:12:55:51.79%:99:1.3048E-11:37:27:15:12:57 0/1:43:22:12:10:41:51.16%:82:6.1932E-9:39:21:9:12:45 0/1:41:24:13:11:41:57.14%:93:4.6506E-10:38:17:8:9:44 0/1:45:23:15:8:44:51.11%:86:2.3136E-9:38:21:14:7:48 0/1:40:16:7:9:23:64%:63:4.1493E-7:41:9:3:6:26 0/1:42:20:9:11:35:54.05%:75:2.7004E-8:37:17:7:10:37 0/1:43:21:10:11:46:43.75%:75:2.8521E-8:39:27:14:13:48 0/1:42:22:16:6:37:59.46%:85:2.5665E-9:35:15:8:7:39 0/1:46:15:10:5:35:42.86%:53:4.5018E-6:39:20:10:10:38 0/1:44:15:10:5:33:45.45%:54:3.5464E-6:36:17:7:10:33 0/1:43:27:14:13:69:38.57%:95:3.1039E-10:38:42:21:21:70 0/1:47:15:10:5:38:39.47%:52:5.4463E-6:43:23:10:13:41 0/1:45:15:9:6:39:38.46%:52:5.7558E-6:44:24:15:9:39 0/1:42:18:12:6:35:50%:66:2.1904E-7:37:18:7:11:36 0/1:49:13:9:4:37:35.14%:44:3.404E-5:41:24:14:10:38 0/1:51:12:9:3:23:52.17%:44:3.4748E-5:35:11:7:4:23 0/1:44:19:12:7:32:59.38%:73:3.9837E-8:40:13:6:7:33 0/1:47:23:7:16:45:51.11%:85:2.6125E-9:40:22:9:13:45 0/1:41:20:11:9:38:50%:74:3.4806E-8:36:19:10:9:40 0/1:43:12:9:3:31:38.71%:41:6.5329E-5:37:19:14:5:31 0/1:44:16:9:7:32:50%:59:1.0995E-6:39:15:8:7:34 0/1:51:22:11:11:45:47.83%:80:8.5409E-9:39:24:11:13:47 0/1:46:19:9:10:52:35.85%:65:2.5408E-7:38:33:16:17:54 0/1:46:21:9:12:43:47.73%:77:1.6451E-8:37:21:8:13:45 MTB_anc 3663754 . C CCTGT . PASS AC=1;AF=3.333e-03;AN=300;ANN=CCTGT|frameshift_variant&stop_gained|HIGH|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.66_67insCTGT|p.Glu23fs|67/534|67/534|23/177||,CCTGT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663754_3663755insCTGT||||||,CCTGT|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663754_3663755insCTGT||||||;HOM=0;LOF=(accE5_Rv3281|gene3358|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:6:2:4:50:12%:44:1.3331E-2:41:44:30:14:50 0/0:0:0:0:0:10:0%:17:1E0:49:10:4:6:11 0/0:37:6:4:2:52:11.54%:47:1.3417E-2:46:46:29:17:55 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:33 0/0:38:2:0:2:31:6.45%:40:2.459E-1:44:29:18:11:33 0/0:37:2:0:2:24:8.33%:27:2.4468E-1:42:22:12:10:24 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:37 0/0:37:2:2:0:35:5.71%:47:2.4638E-1:44:33:17:16:36 0/0:0:0:0:0:37:0%:70:1E0:49:37:15:22:38 0/0:38:1:1:0:29:3.45%:45:5E-1:49:28:13:15:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:36 0/0:38:2:1:1:48:4.17%:67:2.4737E-1:43:46:21:25:51 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:38:4:0:4:39:10.26%:41:5.7662E-2:44:35:20:15:41 0/0:38:1:0:1:34:2.94%:51:5E-1:43:33:18:15:34 0/0:37:2:1:1:40:5%:53:2.4684E-1:44:38:23:15:42 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 0/0:38:1:0:1:21:4.76%:31:5E-1:46:20:11:9:22 0/0:35:3:0:3:21:14.29%:19:1.1585E-1:49:18:7:11:21 0/0:37:1:0:1:21:4.76%:27:5E-1:43:19:8:11:22 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 0/0:38:4:3:1:49:8.16%:56:5.8654E-2:44:45:24:21:50 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:37:4:2:2:42:9.52%:44:5.79E-2:46:37:19:18:43 0/0:38:3:1:2:32:9.38%:34:1.1905E-1:43:29:12:17:34 0/0:38:1:1:0:29:3.45%:45:5E-1:44:28:17:11:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:37:1:1:0:35:2.86%:55:5E-1:42:34:17:17:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:37:2:1:1:28:7.14%:34:2.4545E-1:46:26:9:17:29 0/0:37:1:1:0:41:2.44%:66:5E-1:44:40:17:23:41 0/0:38:1:0:1:28:3.57%:41:5E-1:46:27:14:13:28 0/0:36:1:0:1:42:2.38%:66:5E-1:48:41:18:23:44 0/0:38:2:1:1:33:6.06%:40:2.4603E-1:43:30:18:12:35 0/0:37:4:2:2:37:10.81%:38:5.7399E-2:44:33:20:13:37 0/0:38:3:2:1:32:9.38%:34:1.1905E-1:43:29:12:17:33 0/0:37:1:0:1:33:3.03%:52:5E-1:44:32:15:17:33 0/0:38:1:1:0:66:1.52%:99:5E-1:47:64:34:30:68 0/0:38:3:1:2:41:7.32%:50:1.2037E-1:44:38:17:21:43 0/0:38:2:2:0:53:3.77%:74:2.4757E-1:42:50:25:25:54 0/0:38:2:1:1:35:5.71%:47:2.4638E-1:42:33:15:18:37 0/0:37:1:0:1:43:2.33%:66:5E-1:46:41:24:17:45 0/0:38:2:2:0:33:6.06%:40:2.4603E-1:46:30:15:15:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/0:38:1:0:1:39:2.56%:62:5E-1:46:38:18:20:43 0/0:36:3:3:0:32:9.38%:34:1.1905E-1:42:29:12:17:32 0/0:37:3:1:2:25:12%:25:1.1735E-1:44:22:7:15:27 0/0:38:1:1:0:33:3.03%:52:5E-1:43:32:15:17:37 0/0:38:4:1:3:45:8.89%:50:5.8311E-2:40:41:18:23:46 0/0:38:2:1:1:47:4.26%:67:2.4731E-1:47:45:26:19:47 0/0:38:1:1:0:18:5.56%:24:5E-1:42:17:9:8:18 0/0:37:2:2:0:41:4.88%:57:2.4691E-1:41:39:23:16:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:36:6:4:2:47:12.77%:42:1.3188E-2:47:41:20:21:51 0/0:38:4:2:2:35:11.43%:35:5.7106E-2:42:31:14:17:35 0/1:37:7:4:3:56:12.5%:21:6.4016E-3:42:49:31:18:57 0/0:38:3:1:2:40:7.5%:46:1.2025E-1:45:37:19:18:40 0/0:37:2:0:2:23:8.7%:28:2.4444E-1:44:21:11:10:23 0/0:37:4:3:1:54:7.41%:62:5.9012E-2:43:50:29:21:56 0/0:38:3:1:2:46:6.52%:53:1.2069E-1:50:41:27:14:48 0/0:37:2:1:1:44:4.55%:60:2.4713E-1:43:42:23:19:45 0/0:37:4:1:3:44:9.09%:46:5.8215E-2:40:40:24:16:44 0/0:37:4:2:2:47:8.51%:53:5.849E-2:40:43:26:17:48 0/0:37:3:2:1:35:8.57%:40:1.1957E-1:44:32:15:17:36 0/0:38:3:2:1:28:10.71%:28:1.1818E-1:46:25:11:14:29 0/0:37:2:1:1:70:2.86%:99:2.482E-1:42:68:39:29:71 0/0:38:2:2:0:36:5.56%:47:2.4648E-1:44:34:27:7:38 0/0:37:5:1:4:48:10.42%:46:2.8014E-2:43:43:22:21:48 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:24 0/0:33:1:0:1:39:2.56%:62:5E-1:48:38:23:15:40 0/0:37:4:1:3:40:10%:40:5.7784E-2:46:36:20:16:41 0/0:38:2:0:2:35:5.71%:47:2.4638E-1:52:33:14:19:35 0/0:38:2:1:1:31:6.45%:40:2.459E-1:53:29:16:13:32 0/0:38:2:2:0:40:5%:53:2.4684E-1:51:38:15:23:40 0/0:37:4:3:1:44:9.09%:46:5.8215E-2:43:40:21:19:45 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:37:1:1:0:45:2.22%:73:5E-1:43:44:23:21:47 0/0:37:3:2:1:43:6.98%:53:1.2059E-1:48:40:23:17:43 0/0:38:1:0:1:34:2.94%:51:5E-1:48:33:15:18:36 0/0:38:1:0:1:33:3.03%:52:5E-1:44:32:19:13:35 0/0:38:2:2:0:35:5.71%:47:2.4638E-1:45:33:18:15:37 0/0:0:0:0:0:51:0%:97:1E0:44:51:30:21:53 0/0:38:1:0:1:42:2.38%:66:5E-1:42:41:26:15:43 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:49:26:10:16:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:37 0/0:38:1:0:1:35:2.86%:55:5E-1:42:34:21:13:35 0/0:38:3:2:1:30:10%:31:1.1864E-1:46:27:12:15:34 0/0:38:1:0:1:27:3.7%:41:5E-1:45:26:18:8:27 0/0:38:3:2:1:32:9.38%:34:1.1905E-1:47:29:14:15:33 0/0:37:4:1:3:31:12.9%:29:5.6405E-2:46:27:8:19:31 0/0:38:1:1:0:28:3.57%:41:5E-1:45:27:16:11:29 0/0:38:1:0:1:36:2.78%:55:5E-1:48:35:17:18:36 0/0:38:3:1:2:47:6.38%:59:1.2097E-1:40:44:22:22:48 0/0:38:5:1:4:47:10.64%:47:2.7945E-2:45:42:23:19:48 0/0:38:2:0:2:49:4.08%:67:2.4737E-1:43:46:31:15:52 0/0:36:2:1:1:33:6.06%:44:2.4615E-1:42:31:16:15:35 0/0:36:3:2:1:35:8.57%:40:1.1957E-1:41:32:22:10:37 0/0:38:4:2:2:36:11.11%:35:5.7106E-2:44:31:12:19:37 0/0:36:1:0:1:46:2.17%:73:5E-1:43:44:24:20:47 0/0:38:4:1:3:44:9.09%:46:5.8215E-2:42:40:24:16:48 0/0:38:2:0:2:29:6.9%:37:2.4561E-1:44:27:12:15:30 0/0:37:3:1:2:44:6.82%:53:1.2069E-1:42:41:20:21:44 0/0:0:0:0:0:32:0%:59:1E0:41:32:22:10:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:26 0/0:38:1:1:0:28:3.57%:41:5E-1:43:27:15:12:28 0/0:37:1:1:0:29:3.45%:45:5E-1:45:28:17:11:29 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:45 0/0:38:4:3:1:40:10%:41:5.7662E-2:43:35:11:24:42 0/0:38:2:0:2:41:4.88%:57:2.4691E-1:45:39:21:18:42 0/0:38:1:1:0:28:3.57%:41:5E-1:45:27:15:12:29 0/0:38:1:1:0:36:2.78%:55:5E-1:43:35:20:15:38 0/0:37:3:2:1:44:6.82%:53:1.2059E-1:46:40:21:19:45 0/0:38:2:2:0:33:6.06%:44:2.4615E-1:43:31:15:16:33 0/0:49:2:0:2:42:4.65%:57:2.4699E-1:48:40:27:13:45 0/0:0:0:0:0:42:0%:77:1E0:39:42:25:17:45 0/0:36:2:1:1:47:4.26%:67:2.4731E-1:40:45:29:16:49 0/0:38:4:2:2:46:8.7%:49:5.8402E-2:39:42:24:18:47 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:37:1:1:0:39:2.56%:58:5E-1:39:37:23:14:40 0/0:37:4:3:1:66:6.06%:81:5.9648E-2:44:62:39:23:67 0/0:38:4:2:2:63:6.35%:75:5.9464E-2:42:58:36:22:66 0/0:37:5:0:5:26:19.23%:17:2.531E-2:44:21:12:9:26 0/0:38:1:1:0:42:2.38%:66:5E-1:42:41:29:12:42 0/0:36:5:4:1:56:8.93%:58:2.8473E-2:38:51:23:28:61 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:43 0/0:36:4:2:2:50:8%:55:5.8732E-2:40:46:28:18:52 0/0:38:2:2:0:55:3.64%:81:2.4771E-1:41:53:34:19:59 0/0:33:5:2:3:49:10.2%:50:2.8079E-2:40:44:27:17:52 0/0:36:3:1:2:46:6.52%:56:1.2088E-1:42:43:26:17:50 0/0:38:2:1:1:55:3.64%:81:2.4771E-1:41:53:36:17:55 0/0:0:0:0:0:37:0%:70:1E0:38:37:15:22:39 0/0:25:1:0:1:44:2.27%:69:5E-1:39:43:22:21:45 0/0:38:4:1:3:46:8.7%:49:5.8402E-2:41:42:24:18:51 0/0:37:2:2:0:52:3.85%:74:2.4752E-1:39:49:32:17:54 0/0:38:2:0:2:45:4.44%:60:2.4713E-1:42:42:20:22:47 0/0:38:2:0:2:35:5.71%:47:2.4638E-1:42:33:20:13:35 0/0:38:2:0:2:75:2.67%:99:2.4832E-1:40:73:38:35:76 0/0:38:1:0:1:42:2.38%:66:5E-1:42:41:20:21:43 0/0:0:0:0:0:43:0%:82:1E0:45:43:28:15:44 0/0:37:5:1:4:37:13.51%:32:2.706E-2:40:32:20:12:37 0/0:38:2:1:1:41:4.88%:57:2.4691E-1:43:39:28:11:42 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:27 0/0:37:1:1:0:34:2.94%:51:5E-1:45:33:21:12:35 0/0:34:2:1:1:54:3.7%:78:2.4762E-1:45:51:23:28:55 0/0:38:3:1:2:44:6.82%:53:1.2069E-1:39:41:26:15:44 0/0:38:2:1:1:36:5.56%:47:2.4648E-1:39:34:23:11:36 0/0:37:3:1:2:40:7.5%:46:1.2025E-1:40:37:18:19:40 0/0:37:1:0:1:45:2.22%:69:5E-1:45:43:24:19:46 0/0:37:4:1:3:52:7.69%:59:5.8877E-2:42:48:28:20:55 0/0:37:2:1:1:55:3.64%:81:2.4771E-1:41:53:25:28:55 MTB_anc 3663757 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|synonymous_variant|LOW|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.69A>G|p.Glu23Glu|69/534|69/534|23/177||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663757A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663757A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:6:2:4:42:14.29%:33:1.2905E-2:42:36:23:13:42 0/0:0:0:0:0:10:0%:17:1E0:47:10:4:6:11 0/0:37:6:4:2:41:14.63%:33:1.2841E-2:50:35:23:12:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:39:2:0:2:28:7.14%:34:2.4545E-1:45:26:17:9:30 0/0:35:2:0:2:20:10%:21:2.4359E-1:43:18:10:8:20 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:38:2:2:0:29:6.9%:37:2.4561E-1:45:27:15:12:29 0/0:0:0:0:0:27:0%:52:1E0:50:27:10:17:28 0/0:39:1:1:0:25:4%:38:5E-1:49:24:10:14:26 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:35 0/0:38:2:1:1:44:4.55%:60:2.4713E-1:44:42:21:21:45 0/0:0:0:0:0:19:0%:37:1E0:44:19:13:6:19 0/0:39:4:0:4:33:12.12%:32:5.6777E-2:45:29:17:12:36 0/0:39:1:0:1:29:3.45%:45:5E-1:44:28:15:13:29 0/0:48:2:1:1:34:5.88%:43:2.4627E-1:44:32:18:14:35 0/0:0:0:0:0:15:0%:29:1E0:46:15:9:6:15 0/0:39:1:0:1:15:6.67%:21:5E-1:50:14:7:7:17 0/0:43:3:0:3:15:20%:11:1.1207E-1:50:12:6:6:15 0/0:39:1:1:0:19:5.26%:24:5E-1:44:17:8:9:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:25 0/0:39:4:3:1:42:9.52%:43:5.801E-2:42:38:18:20:42 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:30 0/0:49:4:2:2:39:10.26%:37:5.7534E-2:47:34:17:17:41 0/0:38:3:1:2:33:9.09%:37:1.1923E-1:42:30:13:17:33 0/0:39:1:1:0:25:4%:38:5E-1:43:24:11:13:25 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:25 0/0:37:1:1:0:29:3.45%:45:5E-1:44:28:14:14:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:38:2:1:1:21:9.52%:25:2.439E-1:49:19:6:13:22 0/0:37:1:1:0:31:3.23%:48:5E-1:45:30:13:17:32 0/0:39:1:0:1:22:4.55%:31:5E-1:49:21:11:10:22 0/0:37:1:0:1:34:2.94%:51:5E-1:50:33:15:18:35 0/0:37:3:2:1:25:12%:22:1.1702E-1:45:21:13:8:26 0/0:44:4:2:2:34:11.76%:31:5.6946E-2:43:30:17:13:34 0/0:38:3:2:1:28:10.71%:28:1.1818E-1:45:25:9:16:31 0/0:37:1:0:1:29:3.45%:45:5E-1:45:28:16:12:29 0/0:38:1:1:0:61:1.64%:99:5E-1:46:60:33:27:61 0/0:38:3:1:2:35:8.57%:40:1.1957E-1:44:32:15:17:36 0/0:39:2:2:0:44:4.55%:60:2.4713E-1:42:42:20:22:44 0/0:39:2:1:1:34:5.88%:43:2.4627E-1:43:32:17:15:34 0/0:39:1:1:0:33:3.03%:48:5E-1:47:31:19:12:35 0/0:39:2:2:0:28:7.14%:34:2.4528E-1:46:25:12:13:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:37:1:0:1:29:3.45%:45:5E-1:48:28:13:15:32 0/0:38:3:3:0:27:11.11%:28:1.1792E-1:44:24:11:13:27 0/0:38:3:1:2:22:13.64%:19:1.1628E-1:46:19:6:13:22 0/0:39:1:1:0:29:3.45%:45:5E-1:42:28:12:16:29 0/0:44:4:1:3:37:10.81%:38:5.7399E-2:42:33:13:20:37 0/0:39:2:1:1:37:5.41%:50:2.4658E-1:49:35:20:15:38 0/0:39:1:1:0:16:6.25%:21:5E-1:46:15:9:6:16 0/0:38:2:2:0:37:5.41%:50:2.4658E-1:41:35:22:13:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:38:6:4:2:37:16.22%:28:1.2549E-2:47:31:14:17:38 0/0:44:4:2:2:27:14.81%:23:5.5494E-2:44:23:12:11:28 0/1:38:7:4:3:48:14.58%:22:6.1774E-3:42:41:26:15:50 0/0:38:3:1:2:32:9.38%:34:1.1905E-1:45:29:15:14:32 0/0:31:2:0:2:21:9.52%:25:2.439E-1:47:19:10:9:21 0/0:37:4:3:1:41:9.76%:44:5.79E-2:45:37:24:13:42 0/0:38:3:1:2:36:8.33%:40:1.1957E-1:55:32:19:13:39 0/0:38:2:1:1:35:5.71%:47:2.4638E-1:43:33:16:17:35 0/0:38:4:1:3:40:10%:40:5.7784E-2:43:36:23:13:43 0/0:38:4:2:2:37:10.81%:38:5.7399E-2:43:33:21:12:39 0/0:38:3:2:1:31:9.68%:34:1.1885E-1:44:28:10:18:32 0/0:53:3:2:1:23:13.04%:22:1.1667E-1:47:20:7:13:23 0/0:38:2:1:1:54:3.7%:77:2.4766E-1:43:52:33:19:56 0/0:39:2:2:0:28:7.14%:34:2.4545E-1:44:26:22:4:29 0/0:46:5:1:4:41:12.2%:38:2.7465E-2:45:36:20:16:41 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:22 0/0:37:1:0:1:30:3.33%:44:5E-1:46:29:17:12:30 0/0:38:4:1:3:37:10.81%:38:5.7399E-2:46:33:18:15:37 0/0:49:2:0:2:31:6.45%:40:2.459E-1:53:29:12:17:31 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:54:26:16:10:29 0/0:39:2:2:0:32:6.25%:40:2.4603E-1:52:30:12:18:32 0/0:38:4:3:1:40:10%:40:5.7784E-2:44:36:17:19:40 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:19 0/0:37:1:1:0:35:2.86%:55:5E-1:45:34:21:13:36 0/0:38:3:2:1:36:8.33%:40:1.1972E-1:48:33:19:14:36 0/0:33:1:0:1:33:3.03%:52:5E-1:46:32:14:18:33 0/0:39:1:0:1:30:3.33%:44:5E-1:47:29:18:11:33 0/0:39:2:2:0:23:8.7%:28:2.4444E-1:43:21:9:12:23 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:46 0/0:39:1:0:1:39:2.56%:62:5E-1:43:38:26:12:40 0/0:39:2:1:1:25:8%:31:2.449E-1:49:23:9:14:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:39:1:0:1:26:3.85%:38:5E-1:42:25:15:10:27 0/0:39:3:2:1:27:11.11%:28:1.1792E-1:45:24:9:15:27 0/0:39:1:0:1:17:5.88%:24:5E-1:47:16:11:5:19 0/0:39:3:2:1:26:11.54%:25:1.1765E-1:48:23:12:11:26 0/0:38:4:1:3:27:14.81%:23:5.5494E-2:50:23:6:17:27 0/0:39:1:1:0:24:4.17%:34:5E-1:43:23:14:9:24 0/0:38:1:0:1:28:3.57%:41:5E-1:50:27:13:14:28 0/0:46:3:1:2:39:7.69%:47:1.2013E-1:41:36:20:16:39 0/0:38:4:1:3:38:10.53%:37:5.7534E-2:46:34:16:18:40 0/0:39:2:0:2:46:4.35%:64:2.4719E-1:43:43:29:14:47 0/0:38:2:1:1:30:6.67%:37:2.4576E-1:42:28:14:14:30 0/0:38:3:2:1:28:10.71%:28:1.1818E-1:43:25:16:9:29 0/0:39:4:2:2:31:12.9%:26:5.62E-2:46:26:10:16:31 0/0:38:1:0:1:43:2.38%:66:5E-1:44:41:23:18:43 0/0:39:4:1:3:37:10.81%:38:5.7399E-2:43:33:22:11:40 0/0:39:2:0:2:26:7.69%:30:2.451E-1:45:24:11:13:26 0/0:37:3:1:2:34:8.82%:37:1.194E-1:43:31:17:14:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:18:7:27 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:22 0/0:38:1:1:0:22:4.55%:31:5E-1:44:21:9:12:24 0/0:60:1:1:0:22:4.55%:31:5E-1:48:21:14:7:22 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:38:4:3:1:32:12.5%:29:5.6596E-2:44:28:7:21:34 0/0:38:2:0:2:34:5.88%:43:2.4627E-1:45:32:20:12:34 0/0:39:1:1:0:20:5%:27:5E-1:49:19:12:7:21 0/0:39:1:1:0:28:3.57%:41:5E-1:45:27:15:12:30 0/0:46:3:2:1:35:8.57%:40:1.1957E-1:47:32:15:17:36 0/0:39:2:2:0:28:7.14%:34:2.4545E-1:45:26:12:14:28 0/0:49:2:0:2:34:5.88%:43:2.4627E-1:47:32:19:13:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:37 0/0:38:2:1:1:35:5.71%:47:2.4638E-1:42:33:20:13:37 0/0:38:4:2:2:37:10.81%:38:5.7399E-2:40:33:19:14:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:28 0/0:37:1:0:1:34:2.94%:52:5E-1:39:32:20:12:38 0/0:38:4:3:1:60:6.67%:71:5.9362E-2:44:56:35:21:60 0/0:39:4:2:2:54:7.41%:62:5.8946E-2:42:49:28:21:57 0/0:37:5:0:5:25:20%:17:2.5076E-2:44:20:11:9:26 0/0:39:1:1:0:32:3.12%:48:5E-1:45:31:23:8:34 0/0:38:5:4:1:51:9.8%:53:2.8203E-2:39:46:22:24:55 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 0/0:37:4:2:2:40:10%:40:5.7784E-2:40:36:23:13:41 0/0:39:2:2:0:44:4.55%:60:2.4713E-1:43:42:25:17:47 0/0:42:5:2:3:40:12.5%:35:2.7371E-2:40:35:21:14:41 0/0:38:3:1:2:39:7.69%:47:1.2013E-1:43:36:19:17:40 0/0:38:2:1:1:44:4.55%:60:2.4713E-1:42:42:29:13:45 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:34 0/0:37:1:0:1:33:3.03%:52:5E-1:41:32:17:15:38 0/0:38:3:1:2:39:7.69%:47:1.2013E-1:42:36:20:16:41 0/0:38:2:2:0:46:4.35%:64:2.4719E-1:40:43:29:14:49 0/0:37:2:0:2:37:5.41%:47:2.4648E-1:42:34:14:20:38 0/0:38:2:0:2:30:6.67%:37:2.4576E-1:43:28:18:10:30 0/0:39:2:0:2:57:3.51%:84:2.4779E-1:41:55:29:26:59 0/0:39:1:0:1:30:3.33%:44:5E-1:43:29:16:13:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:35 0/0:38:5:1:4:32:15.62%:24:2.6412E-2:41:27:19:8:32 0/0:39:2:1:1:30:6.67%:37:2.4576E-1:46:28:22:6:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:15:5:20 0/0:37:1:1:0:29:3.45%:45:5E-1:46:28:19:9:30 0/0:38:2:1:1:45:4.44%:60:2.4713E-1:47:42:19:23:46 0/0:39:3:1:2:38:7.89%:43:1.2E-1:41:35:22:13:38 0/0:39:2:1:1:28:7.14%:34:2.4545E-1:40:26:17:9:29 0/0:38:3:1:2:34:8.82%:37:1.194E-1:42:31:13:18:35 0/0:39:1:1:0:35:2.86%:51:5E-1:45:33:19:14:35 0/0:38:4:1:3:44:9.09%:46:5.8215E-2:42:40:23:17:44 0/0:38:2:1:1:46:4.35%:63:2.4725E-1:41:44:22:22:46 MTB_anc 3663758 . G T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.70G>T|p.Val24Leu|70/534|70/534|24/177||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663758G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663758G>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:39:6:2:4:42:14.29%:33:1.2905E-2:42:36:23:13:42 0/0:0:0:0:0:10:0%:17:1E0:49:10:4:6:11 0/0:37:6:4:2:41:14.63%:33:1.2841E-2:49:35:23:12:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:39:2:0:2:28:7.14%:34:2.4545E-1:46:26:17:9:30 0/0:38:2:0:2:20:10%:21:2.4359E-1:42:18:10:8:20 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:27 0/0:38:2:2:0:28:7.14%:34:2.4545E-1:45:26:14:12:29 0/0:0:0:0:0:27:0%:52:1E0:50:27:10:17:28 0/0:39:1:1:0:25:4%:38:5E-1:49:24:10:14:26 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:38:2:1:1:43:4.65%:60:2.4706E-1:44:41:20:21:45 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:39:4:0:4:35:11.43%:35:5.7106E-2:44:31:19:12:36 0/0:39:1:0:1:29:3.45%:45:5E-1:44:28:15:13:29 0/0:48:2:1:1:35:5.71%:47:2.4638E-1:44:33:18:15:35 0/0:0:0:0:0:15:0%:29:1E0:46:15:9:6:15 0/0:39:1:0:1:16:6.25%:21:5E-1:49:15:8:7:17 0/0:43:3:0:3:15:20%:11:1.1207E-1:50:12:6:6:15 0/0:38:1:1:0:19:5.26%:28:5E-1:45:18:8:10:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:25 0/0:38:4:3:1:41:9.76%:44:5.79E-2:42:37:17:20:43 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:46:4:2:2:40:10%:40:5.7784E-2:46:36:18:18:41 0/0:39:3:1:2:34:8.82%:37:1.194E-1:41:31:13:18:34 0/0:39:1:1:0:25:4%:38:5E-1:43:24:11:13:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:48:20:7:13:22 0/0:37:1:1:0:32:3.12%:48:5E-1:45:31:14:17:32 0/0:39:1:0:1:22:4.55%:31:5E-1:49:21:11:10:22 0/0:39:1:0:1:35:2.86%:55:5E-1:50:34:16:18:35 0/0:39:2:1:1:25:8%:31:2.449E-1:44:23:14:9:26 0/0:41:4:2:2:34:11.76%:31:5.6946E-2:43:30:17:13:34 0/0:39:3:2:1:31:9.68%:34:1.1885E-1:43:28:11:17:31 0/0:37:1:0:1:29:3.45%:45:5E-1:45:28:16:12:29 0/0:38:1:1:0:60:1.67%:98:5E-1:47:59:32:27:61 0/0:39:3:1:2:35:8.57%:40:1.1957E-1:45:32:16:16:36 0/0:39:2:2:0:44:4.55%:60:2.4713E-1:42:42:20:22:44 0/0:39:2:1:1:35:5.71%:47:2.4638E-1:42:33:18:15:35 0/0:39:1:1:0:33:3.03%:52:5E-1:47:32:20:12:35 0/0:39:2:2:0:28:7.14%:34:2.4545E-1:46:26:13:13:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:37:1:0:1:28:3.57%:41:5E-1:48:27:13:14:32 0/0:46:3:3:0:27:11.11%:28:1.1792E-1:44:24:11:13:27 0/0:38:3:1:2:22:13.64%:19:1.1628E-1:46:19:6:13:22 0/0:39:1:1:0:29:3.45%:45:5E-1:42:28:12:16:29 0/0:44:4:1:3:37:10.81%:38:5.7399E-2:42:33:13:20:37 0/0:39:2:1:1:38:5.26%:50:2.4667E-1:48:36:20:16:38 0/0:39:1:1:0:16:6.25%:21:5E-1:46:15:9:6:16 0/0:38:2:2:0:37:5.41%:50:2.4658E-1:41:35:22:13:38 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:37:6:4:2:37:16.22%:28:1.2549E-2:47:31:14:17:38 0/0:44:4:2:2:28:14.29%:23:5.5746E-2:43:24:12:12:28 0/1:38:7:4:3:51:13.73%:22:6.2693E-3:41:44:28:16:51 0/0:38:3:1:2:31:9.68%:34:1.1885E-1:45:28:15:13:32 0/0:35:2:0:2:21:9.52%:25:2.439E-1:47:19:10:9:21 0/0:38:4:3:1:41:9.76%:44:5.79E-2:45:37:24:13:42 0/0:37:3:1:2:38:7.89%:43:1.2E-1:52:35:21:14:40 0/0:38:2:1:1:35:5.71%:47:2.4638E-1:43:33:16:17:35 0/0:38:4:1:3:42:9.52%:43:5.801E-2:43:38:25:13:44 0/0:38:4:2:2:39:10.26%:41:5.7662E-2:42:35:23:12:39 0/0:38:3:2:1:32:9.38%:34:1.1905E-1:44:29:11:18:32 0/0:53:3:2:1:22:13.64%:19:1.1628E-1:48:19:6:13:23 0/0:38:2:1:1:55:3.64%:81:2.4771E-1:43:53:34:19:56 0/0:39:2:2:0:29:6.9%:37:2.4561E-1:45:27:23:4:29 0/0:46:5:1:4:40:12.5%:35:2.7371E-2:44:35:19:16:41 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:22 0/0:37:1:0:1:29:3.45%:45:5E-1:46:28:16:12:30 0/0:38:4:1:3:37:10.81%:38:5.7399E-2:47:33:18:15:37 0/0:49:2:0:2:31:6.45%:40:2.459E-1:53:29:12:17:31 0/0:39:2:1:1:28:7.14%:34:2.4545E-1:53:26:16:10:29 0/0:39:2:2:0:32:6.25%:40:2.4603E-1:52:30:12:18:32 0/0:38:4:3:1:40:10%:40:5.7784E-2:43:36:17:19:40 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:37:1:1:0:35:2.86%:55:5E-1:45:34:21:13:36 0/0:38:3:2:1:36:8.33%:40:1.1972E-1:48:33:19:14:36 0/0:33:1:0:1:33:3.03%:52:5E-1:47:32:14:18:33 0/0:39:1:0:1:29:3.45%:45:5E-1:47:28:17:11:33 0/0:39:2:2:0:23:8.7%:28:2.4444E-1:43:21:9:12:23 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:45 0/0:39:1:0:1:39:2.56%:62:5E-1:42:38:26:12:40 0/0:39:2:1:1:25:8%:31:2.449E-1:50:23:9:14:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:39:1:0:1:27:3.7%:41:5E-1:42:26:16:10:27 0/0:39:3:2:1:27:11.11%:28:1.1792E-1:45:24:9:15:27 0/0:39:1:0:1:19:5.26%:28:5E-1:45:18:12:6:19 0/0:39:3:2:1:26:11.54%:25:1.1765E-1:48:23:12:11:26 0/0:38:4:1:3:27:14.81%:23:5.5494E-2:50:23:6:17:27 0/0:39:1:1:0:24:4.17%:34:5E-1:44:23:14:9:24 0/0:39:1:0:1:29:3.45%:45:5E-1:52:28:14:14:29 0/0:46:3:1:2:39:7.69%:47:1.2013E-1:41:36:20:16:39 0/0:38:5:1:4:40:12.5%:35:2.7371E-2:46:35:17:18:40 0/0:39:2:0:2:47:4.26%:67:2.4731E-1:43:45:30:15:48 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:43:27:14:13:30 0/0:39:3:2:1:29:10.34%:31:1.1842E-1:43:26:17:9:29 0/0:39:4:2:2:31:12.9%:29:5.6405E-2:46:27:11:16:31 0/0:39:1:0:1:41:2.5%:62:5E-1:44:39:23:16:43 0/0:39:4:1:3:37:10.81%:38:5.7399E-2:43:33:22:11:39 0/0:39:2:0:2:26:7.69%:30:2.451E-1:45:24:11:13:26 0/0:37:3:1:2:33:9.09%:37:1.1923E-1:43:30:17:13:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:20:7:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:39:1:1:0:23:4.35%:34:5E-1:44:22:11:11:24 0/0:60:1:1:0:22:4.55%:31:5E-1:48:21:14:7:22 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:38:4:3:1:33:12.12%:32:5.6777E-2:43:29:8:21:33 0/0:38:2:0:2:34:5.88%:43:2.4627E-1:45:32:20:12:34 0/0:39:1:1:0:21:4.76%:31:5E-1:48:20:12:8:21 0/0:39:1:1:0:29:3.45%:45:5E-1:45:28:16:12:30 0/0:46:3:2:1:35:8.57%:40:1.1957E-1:47:32:15:17:36 0/0:39:2:2:0:27:7.41%:34:2.4528E-1:46:25:11:14:28 0/0:49:2:0:2:35:5.71%:47:2.4638E-1:47:33:20:13:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:39:2:1:1:37:5.41%:50:2.4658E-1:41:35:22:13:37 0/0:38:4:2:2:38:10.53%:37:5.7534E-2:41:34:20:14:39 0/0:0:0:0:0:28:0%:51:1E0:42:28:20:8:28 0/0:37:1:0:1:35:2.86%:55:5E-1:39:34:22:12:38 0/0:38:4:3:1:60:6.67%:71:5.9362E-2:44:56:35:21:60 0/0:37:4:2:2:57:7.02%:68:5.9196E-2:42:53:31:22:57 0/0:37:5:0:5:27:18.52%:19:2.5527E-2:43:22:13:9:27 0/0:39:1:1:0:32:3.12%:48:5E-1:44:31:23:8:34 0/0:38:5:4:1:52:9.62%:52:2.8261E-2:40:47:22:25:55 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:35 0/0:38:3:2:1:40:7.5%:46:1.2025E-1:39:37:23:14:41 0/0:39:2:2:0:46:4.35%:63:2.4725E-1:43:44:27:17:47 0/0:42:5:2:3:41:12.2%:38:2.7465E-2:40:36:22:14:41 0/0:38:3:1:2:38:7.89%:43:1.2E-1:44:35:18:17:40 0/0:39:1:1:0:43:2.33%:70:5E-1:42:42:29:13:45 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:38 0/0:37:3:1:2:40:7.5%:46:1.2025E-1:42:37:21:16:41 0/0:37:2:2:0:49:4.08%:71:2.4742E-1:39:47:33:14:49 0/0:39:1:1:0:36:2.78%:55:5E-1:42:35:14:21:38 0/0:38:2:0:2:30:6.67%:37:2.4576E-1:43:28:18:10:30 0/0:39:2:0:2:58:3.45%:84:2.4783E-1:41:56:30:26:59 0/0:39:1:0:1:30:3.33%:44:5E-1:43:29:16:13:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:22:12:35 0/0:38:5:1:4:32:15.62%:24:2.6412E-2:41:27:19:8:32 0/0:39:2:1:1:30:6.67%:37:2.4576E-1:47:28:22:6:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:15:5:20 0/0:37:1:1:0:29:3.45%:45:5E-1:46:28:19:9:30 0/0:39:1:1:0:45:2.22%:73:5E-1:46:44:20:24:46 0/0:39:3:1:2:38:7.89%:43:1.2E-1:41:35:22:13:38 0/0:39:2:1:1:28:7.14%:34:2.4545E-1:41:26:17:9:29 0/0:38:3:1:2:34:8.82%:37:1.194E-1:42:31:13:18:35 0/0:39:1:1:0:35:2.86%:55:5E-1:45:34:19:15:35 0/0:38:4:1:3:44:9.09%:46:5.8215E-2:42:40:23:17:44 0/0:38:2:1:1:46:4.35%:63:2.4725E-1:41:44:21:23:47 MTB_anc 3663759 . T C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.71T>C|p.Val24Ala|71/534|71/534|24/177||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663759T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663759T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:39:6:2:4:43:13.95%:36:1.2967E-2:41:37:24:13:43 0/0:0:0:0:0:9:0%:18:1E0:50:9:3:6:11 0/0:37:6:4:2:42:14.29%:33:1.2905E-2:49:36:24:12:44 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:27 0/0:39:2:0:2:28:7.14%:34:2.4545E-1:45:26:18:8:30 0/0:38:2:0:2:20:10%:21:2.4359E-1:41:18:10:8:20 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:38:2:2:0:28:7.14%:34:2.4545E-1:45:26:14:12:29 0/0:0:0:0:0:26:0%:47:1E0:51:26:9:17:28 0/0:39:1:1:0:25:4%:38:5E-1:50:24:10:14:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:38:2:1:1:45:4.44%:64:2.4719E-1:43:43:22:21:46 0/0:0:0:0:0:19:0%:37:1E0:44:19:13:6:19 0/0:39:4:0:4:36:11.11%:34:5.7257E-2:43:32:20:12:36 0/0:39:1:0:1:29:3.45%:45:5E-1:43:28:15:13:29 0/0:48:2:1:1:35:5.71%:47:2.4638E-1:44:33:18:15:35 0/0:0:0:0:0:13:0%:25:1E0:48:13:8:5:15 0/0:39:1:0:1:16:6.25%:21:5E-1:48:15:8:7:17 0/0:44:3:0:3:16:18.75%:11:1.129E-1:48:13:7:6:16 0/0:37:1:1:0:19:5.26%:28:5E-1:44:18:8:10:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:25 0/0:38:4:3:1:42:9.52%:43:5.801E-2:42:38:17:21:43 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:46:4:2:2:39:10.26%:41:5.7662E-2:45:35:18:17:41 0/0:39:3:1:2:32:9.38%:34:1.1905E-1:41:29:12:17:34 0/0:39:1:1:0:24:4.17%:34:5E-1:43:23:11:12:25 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:30 0/0:38:2:1:1:21:9.52%:25:2.439E-1:48:19:6:13:22 0/0:37:1:1:0:32:3.12%:48:5E-1:44:31:14:17:32 0/0:39:1:0:1:23:4.35%:34:5E-1:48:22:12:10:23 0/0:39:1:0:1:34:2.94%:51:5E-1:50:33:15:18:35 0/0:39:2:1:1:23:8.7%:28:2.4444E-1:42:21:13:8:26 0/0:44:4:2:2:34:11.76%:31:5.6946E-2:43:30:17:13:34 0/0:39:3:2:1:29:10.34%:31:1.1842E-1:44:26:11:15:31 0/0:37:1:0:1:29:3.45%:45:5E-1:44:28:16:12:29 0/0:37:1:1:0:58:1.72%:95:5E-1:46:56:29:27:61 0/0:39:3:1:2:36:8.33%:40:1.1972E-1:44:33:16:17:36 0/0:38:2:2:0:43:4.65%:60:2.4706E-1:42:41:19:22:44 0/0:39:2:1:1:34:5.88%:43:2.4627E-1:42:32:18:14:35 0/0:39:1:1:0:34:2.94%:51:5E-1:46:33:20:13:35 0/0:39:2:2:0:28:7.14%:34:2.4545E-1:45:26:13:13:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:37:1:0:1:29:3.45%:45:5E-1:45:28:13:15:32 0/0:46:3:3:0:27:11.11%:28:1.1792E-1:43:24:11:13:27 0/0:38:3:1:2:21:14.29%:19:1.1585E-1:46:18:5:13:22 0/0:39:1:1:0:27:3.7%:41:5E-1:42:26:10:16:29 0/0:44:4:1:3:37:10.81%:38:5.7399E-2:42:33:13:20:37 0/0:38:2:1:1:36:5.56%:47:2.4648E-1:49:34:19:15:38 0/0:39:1:1:0:16:6.25%:21:5E-1:46:15:9:6:16 0/0:38:2:2:0:37:5.41%:50:2.4658E-1:40:35:22:13:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:37:6:4:2:35:17.14%:25:1.238E-2:48:29:14:15:38 0/0:39:3:2:1:28:10.71%:28:1.1792E-1:41:24:12:12:28 0/1:38:7:4:3:48:14.58%:22:6.1774E-3:42:41:26:15:51 0/0:38:3:1:2:32:9.38%:34:1.1905E-1:43:29:15:14:32 0/0:38:2:0:2:21:9.52%:25:2.439E-1:46:19:10:9:21 0/0:38:4:3:1:42:9.52%:43:5.801E-2:45:38:25:13:42 0/0:39:3:1:2:38:7.89%:43:1.2E-1:51:35:21:14:40 0/0:38:2:1:1:34:5.88%:43:2.4627E-1:43:32:16:16:35 0/0:38:4:1:3:41:9.76%:44:5.79E-2:43:37:24:13:44 0/0:43:4:2:2:38:10.53%:37:5.7534E-2:41:34:24:10:40 0/0:38:3:2:1:30:10%:31:1.1864E-1:44:27:9:18:31 0/0:53:3:2:1:22:13.64%:19:1.1628E-1:47:19:6:13:23 0/0:38:2:1:1:55:3.64%:81:2.4771E-1:43:53:34:19:56 0/0:39:2:2:0:28:7.14%:34:2.4545E-1:45:26:22:4:29 0/0:46:5:1:4:40:12.5%:35:2.7371E-2:44:35:19:16:41 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:23 0/0:37:1:0:1:28:3.57%:41:5E-1:45:27:15:12:30 0/0:38:4:1:3:37:10.81%:38:5.7399E-2:47:33:18:15:37 0/0:49:2:0:2:30:6.67%:37:2.4576E-1:53:28:11:17:31 0/0:39:2:1:1:28:7.14%:34:2.4545E-1:51:26:16:10:29 0/0:39:2:2:0:32:6.25%:40:2.4603E-1:52:30:12:18:32 0/0:38:4:3:1:40:10%:40:5.7784E-2:43:36:17:19:40 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:37:1:1:0:35:2.86%:55:5E-1:44:34:21:13:36 0/0:38:3:2:1:35:8.57%:40:1.1957E-1:47:32:19:13:36 0/0:37:1:0:1:32:3.12%:48:5E-1:47:31:14:17:33 0/0:39:1:0:1:30:3.33%:44:5E-1:45:29:18:11:33 0/0:39:2:2:0:23:8.7%:28:2.4444E-1:43:21:9:12:23 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:46 0/0:38:1:0:1:39:2.56%:62:5E-1:42:38:26:12:41 0/0:39:2:1:1:25:8%:31:2.449E-1:49:23:9:14:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:39:1:0:1:27:3.7%:41:5E-1:42:26:16:10:27 0/0:39:3:2:1:27:11.11%:28:1.1792E-1:46:24:10:14:28 0/0:39:1:0:1:19:5.26%:28:5E-1:44:18:12:6:19 0/0:39:3:2:1:26:11.54%:25:1.1765E-1:48:23:12:11:26 0/0:38:4:1:3:27:14.81%:23:5.5494E-2:49:23:6:17:27 0/0:39:1:1:0:24:4.17%:34:5E-1:43:23:14:9:24 0/0:39:1:0:1:29:3.45%:45:5E-1:51:28:14:14:29 0/0:45:3:1:2:38:7.89%:43:1.2E-1:41:35:19:16:39 0/0:38:5:1:4:40:12.5%:35:2.7371E-2:45:35:17:18:40 0/0:39:2:0:2:44:4.55%:60:2.4713E-1:44:42:27:15:48 0/0:38:2:1:1:30:6.67%:37:2.4576E-1:42:28:14:14:30 0/0:39:3:2:1:28:10.71%:28:1.1818E-1:43:25:16:9:29 0/0:39:4:2:2:32:12.5%:29:5.6596E-2:45:28:12:16:32 0/0:39:1:0:1:41:2.5%:62:5E-1:43:39:22:17:43 0/0:39:4:1:3:37:10.81%:38:5.7399E-2:42:33:22:11:39 0/0:39:2:0:2:26:7.69%:30:2.451E-1:45:24:11:13:26 0/0:37:3:1:2:33:9.09%:37:1.1923E-1:42:30:16:14:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:27 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:22 0/0:39:1:1:0:24:4.17%:34:5E-1:42:23:11:12:25 0/0:50:1:1:0:22:4.55%:31:5E-1:47:21:14:7:22 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:38:4:3:1:32:12.5%:29:5.6596E-2:44:28:8:20:33 0/0:39:2:0:2:34:5.88%:43:2.4627E-1:44:32:20:12:34 0/0:39:1:1:0:21:4.76%:31:5E-1:48:20:12:8:21 0/0:39:1:1:0:28:3.57%:41:5E-1:45:27:15:12:30 0/0:46:3:2:1:35:8.57%:40:1.1957E-1:47:32:15:17:36 0/0:39:2:2:0:27:7.41%:34:2.4528E-1:45:25:11:14:28 0/0:39:1:0:1:38:2.63%:55:5E-1:47:35:22:13:39 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:37 0/0:39:2:1:1:33:6.06%:44:2.4615E-1:41:31:18:13:37 0/0:38:4:2:2:38:10.53%:37:5.7534E-2:41:34:20:14:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:28 0/0:37:1:0:1:32:3.12%:48:5E-1:39:31:20:11:38 0/0:38:4:3:1:60:6.67%:71:5.9362E-2:43:56:35:21:60 0/0:38:4:2:2:57:7.02%:68:5.9196E-2:40:53:31:22:57 0/0:38:5:0:5:27:18.52%:19:2.5527E-2:42:22:13:9:27 0/0:38:1:1:0:32:3.12%:48:5E-1:43:31:23:8:34 0/0:38:5:4:1:50:10%:49:2.8142E-2:39:45:21:24:55 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:35 0/0:37:4:2:2:39:10.26%:41:5.7662E-2:39:35:21:14:41 0/0:39:2:2:0:44:4.55%:60:2.4713E-1:44:42:25:17:47 0/0:43:5:2:3:39:12.82%:35:2.7273E-2:40:34:21:13:41 0/0:38:3:1:2:38:7.89%:43:1.2E-1:43:35:19:16:40 0/0:38:2:1:1:44:4.55%:60:2.4713E-1:41:42:29:13:45 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:34 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:38 0/0:37:3:1:2:36:8.33%:40:1.1972E-1:43:33:18:15:41 0/0:37:2:2:0:47:4.26%:67:2.4731E-1:39:45:31:14:49 0/0:39:1:1:0:36:2.78%:55:5E-1:42:35:14:21:38 0/0:38:2:0:2:30:6.67%:37:2.4576E-1:42:28:18:10:30 0/0:39:2:0:2:57:3.51%:84:2.4779E-1:40:55:28:27:59 0/0:39:1:0:1:30:3.33%:44:5E-1:42:29:17:12:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:23:11:35 0/0:43:5:1:4:32:15.62%:24:2.6412E-2:41:27:19:8:32 0/0:39:2:1:1:29:6.9%:37:2.4561E-1:46:27:21:6:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:15:5:20 0/0:37:1:1:0:29:3.45%:45:5E-1:46:28:19:9:30 0/0:32:2:1:1:45:4.44%:64:2.4719E-1:45:43:19:24:46 0/0:39:3:1:2:36:8.33%:40:1.1972E-1:41:33:20:13:38 0/0:39:2:1:1:29:6.9%:37:2.4561E-1:40:27:18:9:29 0/0:38:3:1:2:33:9.09%:37:1.1923E-1:42:30:12:18:35 0/0:39:1:1:0:35:2.86%:55:5E-1:44:34:19:15:35 0/0:38:4:1:3:44:9.09%:46:5.8215E-2:42:40:23:17:44 0/0:38:2:1:1:45:4.44%:64:2.4719E-1:41:43:20:23:47 MTB_anc 3663766 . C G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|missense_variant|MODERATE|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.78C>G|p.Asp26Glu|78/534|78/534|26/177||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663766C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663766C>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:42:6:2:4:44:13.64%:36:1.3026E-2:41:38:25:13:44 0/0:0:0:0:0:10:0%:17:1E0:49:10:4:6:11 0/0:44:6:4:2:43:13.95%:36:1.2967E-2:49:37:25:12:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:30 0/0:49:2:0:2:29:6.9%:37:2.4561E-1:45:27:18:9:30 0/0:38:2:0:2:19:10.53%:21:2.4324E-1:44:17:10:7:20 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:49:2:2:0:27:7.41%:34:2.4528E-1:44:25:14:11:29 0/0:38:1:1:0:27:3.7%:41:5E-1:52:26:9:17:28 0/0:39:1:1:0:26:3.85%:38:5E-1:49:25:11:14:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:35 0/0:36:2:1:1:43:4.65%:60:2.4706E-1:44:41:20:21:46 0/0:0:0:0:0:18:0%:32:1E0:43:18:12:6:18 0/0:38:4:0:4:36:11.11%:34:5.7257E-2:42:32:20:12:36 0/0:38:1:0:1:29:3.45%:45:5E-1:43:28:15:13:29 0/0:43:2:1:1:34:5.88%:43:2.4627E-1:44:32:18:14:35 0/0:0:0:0:0:13:0%:25:1E0:48:13:8:5:15 0/0:39:1:0:1:16:6.25%:21:5E-1:47:15:8:7:17 0/0:45:3:0:3:17:17.65%:14:1.1364E-1:46:14:8:6:17 0/0:39:1:1:0:18:5.88%:24:5E-1:45:16:8:8:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:25 0/0:38:4:3:1:45:8.89%:50:5.8311E-2:42:41:20:21:45 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:31 0/0:49:4:2:2:41:9.76%:40:5.7784E-2:46:36:17:19:42 0/0:39:3:1:2:35:8.57%:40:1.1957E-1:41:32:13:19:35 0/0:39:1:1:0:25:4%:38:5E-1:44:24:11:13:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:38:2:1:1:22:9.09%:24:2.4419E-1:47:20:7:13:22 0/0:37:1:1:0:31:3.23%:48:5E-1:45:30:14:16:32 0/0:36:1:0:1:24:4.17%:34:5E-1:49:23:12:11:24 0/0:37:1:0:1:35:2.86%:55:5E-1:50:34:16:18:35 0/0:39:2:1:1:23:9.09%:24:2.4419E-1:45:20:14:6:26 0/0:43:4:2:2:34:11.76%:31:5.6946E-2:42:30:17:13:34 0/0:39:3:2:1:32:9.38%:34:1.1905E-1:45:29:11:18:32 0/0:37:1:0:1:28:3.57%:41:5E-1:45:27:16:11:28 0/0:38:2:2:0:62:3.23%:91:2.4797E-1:45:60:33:27:62 0/0:46:3:1:2:36:8.33%:40:1.1972E-1:45:33:16:17:36 0/0:38:2:2:0:45:4.44%:64:2.4719E-1:42:43:21:22:45 0/0:39:2:1:1:35:5.71%:47:2.4638E-1:41:33:18:15:35 0/0:39:1:1:0:34:3.03%:52:5E-1:47:32:20:12:35 0/0:39:2:2:0:28:7.41%:34:2.4528E-1:46:25:12:13:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:37:1:0:1:30:3.33%:44:5E-1:46:29:14:15:32 0/0:46:3:3:0:28:10.71%:28:1.1818E-1:42:25:12:13:28 0/0:45:3:1:2:23:13.04%:22:1.1667E-1:46:20:7:13:23 0/0:39:1:1:0:28:3.57%:41:5E-1:41:27:12:15:29 0/0:43:4:1:3:37:10.81%:38:5.7399E-2:41:33:13:20:37 0/0:49:2:1:1:39:5.13%:54:2.4675E-1:47:37:20:17:39 0/0:38:1:1:0:16:6.25%:21:5E-1:45:15:9:6:16 0/0:38:2:2:0:37:5.41%:50:2.4658E-1:41:35:22:13:39 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:45:6:4:2:36:16.67%:25:1.2467E-2:47:30:14:16:38 0/0:44:4:2:2:28:14.29%:23:5.5746E-2:41:24:12:12:28 0/1:42:7:4:3:52:13.46%:22:6.2977E-3:41:45:29:16:52 0/0:38:3:1:2:32:9.38%:34:1.1905E-1:41:29:16:13:33 0/0:38:2:0:2:21:9.52%:21:2.4359E-1:44:18:10:8:21 0/0:39:4:3:1:42:9.52%:43:5.801E-2:45:38:25:13:42 0/0:38:3:1:2:37:8.33%:40:1.1972E-1:52:33:20:13:40 0/0:60:2:1:1:35:5.71%:47:2.4638E-1:43:33:16:17:35 0/0:49:4:1:3:44:9.09%:46:5.8215E-2:42:40:27:13:46 0/0:43:4:2:2:39:10.26%:41:5.7662E-2:42:35:23:12:40 0/0:46:3:2:1:30:10%:31:1.1864E-1:43:27:10:17:31 0/0:50:3:2:1:23:13.04%:22:1.1667E-1:46:20:7:13:24 0/0:49:2:1:1:56:3.57%:81:2.4775E-1:43:54:35:19:57 0/0:39:2:2:0:31:6.45%:40:2.459E-1:44:29:24:5:31 0/0:50:5:1:4:41:12.2%:35:2.7371E-2:44:35:19:16:41 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:60:1:0:1:29:3.45%:45:5E-1:45:28:16:12:29 0/0:38:4:1:3:37:10.81%:38:5.7399E-2:45:33:18:15:37 0/0:49:2:0:2:32:6.25%:40:2.4603E-1:52:30:12:18:32 0/0:38:2:1:1:28:7.14%:34:2.4545E-1:52:26:16:10:29 0/0:39:2:2:0:32:6.25%:40:2.4603E-1:52:30:12:18:33 0/0:45:3:3:0:42:7.14%:49:1.2048E-1:42:39:19:20:43 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:20 0/0:37:1:1:0:34:2.94%:51:5E-1:44:33:20:13:36 0/0:38:3:2:1:36:8.33%:40:1.1972E-1:47:33:19:14:36 0/0:37:1:0:1:34:2.94%:51:5E-1:48:33:15:18:34 0/0:39:1:0:1:30:3.33%:44:5E-1:48:29:18:11:34 0/0:39:2:2:0:23:8.7%:28:2.4444E-1:42:21:9:12:23 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:46 0/0:39:1:0:1:41:2.44%:66:5E-1:41:40:27:13:42 0/0:38:2:1:1:25:8%:31:2.449E-1:47:23:9:14:25 0/0:0:0:0:0:33:0%:63:1E0:45:33:14:19:34 0/0:39:1:0:1:27:3.7%:41:5E-1:42:26:16:10:27 0/0:38:3:2:1:27:11.11%:28:1.1792E-1:46:24:10:14:28 0/0:39:1:0:1:19:5.26%:28:5E-1:45:18:12:6:19 0/0:39:3:2:1:26:11.54%:25:1.1765E-1:47:23:12:11:26 0/0:44:4:1:3:27:14.81%:23:5.5494E-2:49:23:6:17:27 0/0:39:1:1:0:23:4.35%:34:5E-1:45:22:14:8:24 0/0:39:1:0:1:29:3.45%:45:5E-1:51:28:14:14:29 0/0:46:3:1:2:38:7.89%:43:1.2E-1:41:35:20:15:39 0/0:38:5:1:4:38:13.16%:32:2.7169E-2:45:33:16:17:40 0/0:39:2:0:2:47:4.35%:63:2.4725E-1:43:44:30:14:48 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:42:27:14:13:30 0/0:34:3:2:1:28:10.71%:28:1.1818E-1:42:25:17:8:29 0/0:39:4:2:2:33:12.5%:29:5.6596E-2:45:28:11:17:33 0/0:38:1:0:1:42:2.44%:66:5E-1:43:40:23:17:43 0/0:44:4:1:3:37:10.81%:38:5.7399E-2:43:33:22:11:40 0/0:49:2:0:2:26:7.69%:30:2.451E-1:45:24:11:13:26 0/0:36:3:1:2:33:9.09%:37:1.1923E-1:42:30:17:13:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:21:8:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:23 0/0:39:1:1:0:25:4%:38:5E-1:42:24:12:12:25 0/0:60:1:1:0:22:4.55%:31:5E-1:47:21:14:7:22 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:44:4:3:1:33:12.12%:32:5.6777E-2:42:29:8:21:33 0/0:39:2:0:2:35:5.71%:47:2.4638E-1:45:33:21:12:35 0/0:39:1:1:0:23:4.35%:34:5E-1:47:22:14:8:23 0/0:39:1:1:0:29:3.45%:45:5E-1:44:28:16:12:30 0/0:46:3:2:1:37:8.11%:43:1.1986E-1:47:34:16:18:38 0/0:39:2:2:0:28:7.14%:34:2.4545E-1:45:26:12:14:28 0/0:44:3:0:3:40:7.5%:46:1.2025E-1:47:37:24:13:41 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:38 0/0:39:2:1:1:37:5.41%:50:2.4658E-1:40:35:22:13:38 0/0:44:4:2:2:39:10.26%:41:5.7662E-2:40:35:21:14:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:30 0/0:37:1:0:1:36:2.86%:55:5E-1:40:34:21:13:39 0/0:38:4:3:1:59:6.78%:72:5.9309E-2:44:55:35:20:60 0/0:39:4:2:2:57:7.14%:65:5.9137E-2:41:52:30:22:57 0/0:42:5:0:5:28:17.86%:19:2.5729E-2:43:23:14:9:28 0/0:39:1:1:0:35:2.86%:55:5E-1:44:34:25:9:35 0/0:42:5:4:1:54:9.26%:55:2.8371E-2:39:49:24:25:57 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:34 0/0:38:4:2:2:40:10%:40:5.7784E-2:39:36:23:13:42 0/0:39:2:2:0:47:4.26%:63:2.4725E-1:43:44:28:16:49 0/0:41:5:2:3:42:11.9%:38:2.7555E-2:40:37:24:13:43 0/0:38:3:1:2:40:7.5%:46:1.2025E-1:42:37:20:17:40 0/0:38:2:1:1:44:4.55%:60:2.4713E-1:41:42:29:13:46 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:34 0/0:0:0:0:0:37:0%:66:1E0:40:36:21:15:38 0/0:38:3:1:2:40:7.69%:47:1.2013E-1:41:36:21:15:41 0/0:38:2:2:0:50:4.08%:71:2.4742E-1:40:47:33:14:52 0/0:39:1:1:0:36:2.94%:51:5E-1:42:33:15:18:38 0/0:44:2:0:2:30:6.67%:37:2.4576E-1:43:28:18:10:30 0/0:39:2:0:2:60:3.33%:88:2.479E-1:40:58:31:27:62 0/0:39:1:0:1:32:3.12%:48:5E-1:40:31:18:13:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:23:12:35 0/0:47:5:1:4:32:15.62%:24:2.6412E-2:41:27:19:8:32 0/0:39:2:1:1:31:6.45%:40:2.459E-1:45:29:23:6:33 0/0:0:0:0:0:20:0%:36:1E0:43:20:15:5:21 0/0:37:1:1:0:29:3.45%:45:5E-1:44:28:19:9:30 0/0:37:2:1:1:45:4.55%:60:2.4713E-1:45:42:19:23:46 0/0:45:3:1:2:39:7.69%:47:1.2013E-1:40:36:22:14:40 0/0:39:2:1:1:27:7.41%:34:2.4528E-1:41:25:17:8:29 0/0:45:3:1:2:34:8.82%:37:1.194E-1:42:31:14:17:35 0/0:60:1:1:0:36:2.86%:55:5E-1:45:34:20:14:37 0/0:43:4:1:3:45:8.89%:50:5.8311E-2:42:41:23:18:45 0/0:37:2:1:1:47:4.26%:67:2.4731E-1:41:45:22:23:47 MTB_anc 3663767 . G C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.79G>C|p.Gly27Arg|79/534|79/534|27/177||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663767G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663767G>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:6:2:4:44:13.64%:36:1.3026E-2:41:38:25:13:44 0/0:0:0:0:0:10:0%:17:1E0:49:10:4:6:11 0/0:44:6:4:2:43:13.95%:36:1.2967E-2:48:37:25:12:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:30 0/0:49:2:0:2:26:7.69%:30:2.451E-1:46:24:16:8:29 0/0:36:2:0:2:20:10%:21:2.4359E-1:44:18:10:8:20 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:49:2:2:0:27:7.41%:34:2.4528E-1:43:25:13:12:29 0/0:0:0:0:0:27:0%:52:1E0:51:27:10:17:28 0/0:39:1:1:0:27:3.7%:41:5E-1:48:26:11:15:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 0/0:38:2:1:1:45:4.44%:64:2.4719E-1:44:43:22:21:46 0/0:0:0:0:0:18:0%:32:1E0:41:18:12:6:18 0/0:39:4:0:4:35:11.43%:35:5.7106E-2:43:31:19:12:36 0/0:36:1:0:1:28:3.57%:41:5E-1:44:27:15:12:29 0/0:41:2:1:1:34:5.88%:43:2.4627E-1:43:32:18:14:35 0/0:0:0:0:0:14:0%:25:1E0:47:14:9:5:15 0/0:39:1:0:1:16:6.25%:21:5E-1:49:15:8:7:17 0/0:49:2:0:2:16:12.5%:15:2.4194E-1:46:14:8:6:17 0/0:38:1:1:0:18:5.88%:24:5E-1:44:16:8:8:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:25 0/0:39:4:3:1:45:8.89%:50:5.8311E-2:42:41:20:21:45 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:46:4:2:2:42:9.52%:43:5.801E-2:46:38:19:19:43 0/0:39:3:1:2:34:8.82%:37:1.194E-1:42:31:13:18:35 0/0:39:1:1:0:25:4%:34:5E-1:45:23:10:13:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:30 0/0:38:2:1:1:22:9.09%:24:2.4419E-1:48:20:7:13:22 0/0:37:1:1:0:32:3.12%:48:5E-1:45:31:14:17:32 0/0:37:1:0:1:24:4.17%:34:5E-1:49:23:12:11:24 0/0:37:1:0:1:35:2.86%:55:5E-1:50:34:16:18:35 0/0:39:2:1:1:24:8.7%:28:2.4444E-1:45:21:14:7:26 0/0:41:4:2:2:34:11.76%:31:5.6946E-2:42:30:17:13:34 0/0:39:3:2:1:32:9.38%:34:1.1905E-1:44:29:11:18:32 0/0:37:1:0:1:28:3.57%:41:5E-1:45:27:16:11:28 0/0:38:2:2:0:62:3.23%:91:2.4797E-1:45:60:33:27:62 0/0:45:3:1:2:35:8.57%:40:1.1957E-1:46:32:16:16:36 0/0:38:2:2:0:45:4.44%:64:2.4719E-1:42:43:21:22:45 0/0:39:2:1:1:35:5.71%:47:2.4638E-1:42:33:18:15:35 0/0:39:1:1:0:34:3.03%:52:5E-1:47:32:20:12:35 0/0:39:2:2:0:28:7.41%:30:2.451E-1:46:24:11:13:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:39:1:1:0:28:3.57%:41:5E-1:47:26:12:14:32 0/0:46:3:3:0:28:10.71%:28:1.1818E-1:41:25:12:13:28 0/0:44:3:1:2:23:13.04%:22:1.1667E-1:46:20:7:13:23 0/0:39:1:1:0:29:3.45%:45:5E-1:41:28:12:16:29 0/0:44:4:1:3:37:10.81%:38:5.7399E-2:42:33:13:20:37 0/0:49:2:1:1:38:5.26%:50:2.4667E-1:48:36:20:16:39 0/0:38:1:1:0:16:6.25%:21:5E-1:44:15:9:6:16 0/0:38:2:2:0:38:5.26%:50:2.4667E-1:41:36:23:13:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:43:6:4:2:37:16.22%:25:1.2467E-2:46:30:13:17:38 0/0:44:4:2:2:27:14.81%:23:5.5494E-2:42:23:11:12:28 0/1:42:7:4:3:52:13.46%:22:6.2977E-3:40:45:29:16:52 0/0:38:3:1:2:33:9.09%:37:1.1923E-1:42:30:16:14:33 0/0:38:2:0:2:21:9.52%:25:2.439E-1:46:19:10:9:21 0/0:39:4:3:1:42:9.52%:43:5.801E-2:45:38:25:13:42 0/0:38:3:1:2:38:8.11%:43:1.1986E-1:52:34:20:14:40 0/0:60:2:1:1:35:5.71%:47:2.4638E-1:43:33:16:17:35 0/0:47:4:1:3:43:9.3%:47:5.8115E-2:42:39:26:13:46 0/0:43:4:2:2:41:9.76%:44:5.79E-2:41:37:24:13:41 0/0:46:3:2:1:31:9.68%:34:1.1885E-1:42:28:10:18:31 0/0:53:3:2:1:23:13.04%:22:1.1667E-1:46:20:7:13:24 0/0:44:2:1:1:56:3.57%:81:2.4775E-1:43:54:35:19:57 0/0:39:2:2:0:31:6.45%:37:2.4576E-1:45:28:23:5:31 0/0:50:5:1:4:40:12.5%:35:2.7273E-2:44:34:18:16:41 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:23 0/0:50:1:0:1:29:3.45%:45:5E-1:45:28:16:12:29 0/0:38:4:1:3:37:10.81%:38:5.7399E-2:46:33:18:15:37 0/0:49:2:0:2:30:6.67%:37:2.4576E-1:54:28:11:17:32 0/0:39:2:1:1:29:6.9%:34:2.4545E-1:53:26:16:10:30 0/0:39:2:2:0:31:6.45%:40:2.459E-1:52:29:12:17:32 0/0:43:4:3:1:43:9.3%:47:5.8115E-2:42:39:19:20:43 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:37:1:1:0:35:2.86%:55:5E-1:43:34:21:13:36 0/0:38:3:2:1:35:8.57%:40:1.1957E-1:47:32:19:13:36 0/0:37:1:0:1:34:2.94%:51:5E-1:48:33:15:18:34 0/0:39:1:0:1:30:3.33%:44:5E-1:47:29:18:11:34 0/0:39:2:2:0:23:8.7%:28:2.4444E-1:43:21:9:12:23 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:46 0/0:39:1:0:1:42:2.38%:66:5E-1:42:41:28:13:43 0/0:39:2:1:1:25:8%:31:2.449E-1:48:23:9:14:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 0/0:39:1:0:1:26:3.85%:38:5E-1:42:25:15:10:27 0/0:39:3:2:1:27:11.11%:28:1.1792E-1:46:24:10:14:28 0/0:39:1:0:1:18:5.56%:24:5E-1:45:17:12:5:19 0/0:38:3:2:1:26:11.54%:25:1.1765E-1:47:23:12:11:26 0/0:44:4:1:3:25:16%:21:5.4928E-2:50:21:6:15:27 0/0:39:1:1:0:24:4.17%:34:5E-1:44:23:14:9:24 0/0:37:1:0:1:29:3.45%:45:5E-1:51:28:14:14:29 0/0:46:3:1:2:40:7.5%:46:1.2025E-1:41:37:21:16:40 0/0:38:5:1:4:39:12.82%:35:2.7273E-2:44:34:17:17:40 0/0:39:2:0:2:47:4.35%:63:2.4725E-1:44:44:30:14:49 0/0:34:2:1:1:30:6.67%:37:2.4576E-1:42:28:14:14:30 0/0:38:3:2:1:27:11.11%:28:1.1792E-1:43:24:16:8:29 0/0:39:4:2:2:33:12.5%:29:5.6596E-2:45:28:11:17:33 0/0:39:1:0:1:43:2.38%:66:5E-1:43:41:23:18:43 0/0:41:4:1:3:37:10.81%:38:5.7399E-2:44:33:22:11:40 0/0:48:2:0:2:26:7.69%:30:2.451E-1:45:24:11:13:26 0/0:37:3:1:2:34:8.82%:37:1.194E-1:42:31:17:14:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:23 0/0:39:1:1:0:24:4.17%:34:5E-1:42:23:11:12:25 0/0:60:1:1:0:22:4.55%:31:5E-1:48:21:14:7:22 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:43:4:3:1:31:12.9%:29:5.6405E-2:44:27:7:20:33 0/0:38:2:0:2:34:5.88%:43:2.4627E-1:45:32:20:12:35 0/0:39:1:1:0:22:4.55%:31:5E-1:48:21:14:7:23 0/0:39:1:1:0:29:3.45%:45:5E-1:44:28:16:12:30 0/0:45:3:2:1:37:8.11%:43:1.1986E-1:47:34:16:18:38 0/0:39:2:2:0:28:7.14%:34:2.4545E-1:45:26:12:14:28 0/0:45:3:0:3:40:7.5%:46:1.2025E-1:47:37:24:13:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:38 0/0:39:2:1:1:38:5.26%:50:2.4667E-1:40:36:23:13:38 0/0:43:4:2:2:39:10.26%:41:5.7662E-2:40:35:22:13:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:30 0/0:37:1:0:1:34:3.03%:52:5E-1:39:32:21:11:39 0/0:38:4:3:1:58:6.9%:68:5.9254E-2:44:54:35:19:60 0/0:38:4:2:2:56:7.27%:65:5.9076E-2:42:51:29:22:57 0/0:40:5:0:5:28:17.86%:19:2.5729E-2:43:23:14:9:28 0/0:39:1:1:0:33:3.03%:52:5E-1:44:32:24:8:35 0/0:41:5:4:1:56:8.93%:58:2.8473E-2:39:51:24:27:58 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:34 0/0:37:4:2:2:41:9.76%:44:5.79E-2:38:37:24:13:42 0/0:39:2:2:0:48:4.17%:67:2.4737E-1:43:46:29:17:49 0/0:43:4:2:2:42:9.52%:43:5.801E-2:41:38:24:14:43 0/0:37:3:1:2:36:8.33%:40:1.1972E-1:43:33:17:16:40 0/0:38:2:1:1:45:4.44%:64:2.4719E-1:41:43:30:13:46 0/0:0:0:0:0:33:0%:63:1E0:39:33:14:19:34 0/0:0:0:0:0:36:0%:67:1E0:40:35:21:14:38 0/0:36:3:1:2:38:8.11%:43:1.1986E-1:41:34:20:14:41 0/0:38:2:2:0:49:4.17%:67:2.4737E-1:40:46:32:14:52 0/0:39:1:1:0:35:3.03%:52:5E-1:43:32:14:18:38 0/0:46:2:0:2:28:7.14%:34:2.4545E-1:43:26:16:10:30 0/0:38:2:0:2:60:3.33%:88:2.479E-1:41:58:32:26:62 0/0:38:1:0:1:32:3.12%:48:5E-1:40:30:18:12:32 0/0:37:1:0:1:35:2.86%:55:5E-1:46:34:23:11:35 0/0:47:5:1:4:31:16.13%:24:2.6257E-2:42:26:18:8:32 0/0:38:2:1:1:32:6.25%:40:2.4603E-1:46:30:24:6:33 0/0:0:0:0:0:20:0%:36:1E0:43:20:15:5:21 0/0:37:1:1:0:29:3.45%:45:5E-1:44:28:19:9:30 0/0:38:2:1:1:46:4.44%:64:2.4719E-1:46:43:19:24:46 0/0:45:3:1:2:38:7.89%:43:1.2E-1:40:35:22:13:40 0/0:39:2:1:1:29:6.9%:37:2.4561E-1:40:27:18:9:29 0/0:45:3:1:2:34:8.82%:37:1.194E-1:42:31:14:17:35 0/0:60:1:1:0:36:2.86%:55:5E-1:44:34:20:14:37 0/0:43:4:1:3:44:9.09%:46:5.8215E-2:43:40:23:17:45 0/0:37:2:1:1:47:4.26%:67:2.4731E-1:41:45:22:23:47 MTB_anc 3663770 . AACGAG A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|frameshift_variant|HIGH|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.87_91delGACGA|p.Thr30fs|87/534|87/534|29/177||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663771_3663775delACGAG||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663771_3663775delACGAG||||||;HOM=0;LOF=(accE5_Rv3281|gene3358|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:41:6:2:4:44:13.64%:36:1.3026E-2:40:38:25:13:44 0/0:0:0:0:0:10:0%:17:1E0:50:10:4:6:11 0/0:44:6:4:2:43:13.95%:36:1.2967E-2:48:37:25:12:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:30 0/0:49:2:0:2:30:6.67%:37:2.4576E-1:44:28:19:9:32 0/0:33:2:0:2:21:9.52%:25:2.439E-1:43:19:11:8:21 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:49:2:2:0:27:7.41%:34:2.4528E-1:42:25:13:12:29 0/0:0:0:0:0:29:0%:55:1E0:50:29:11:18:30 0/0:34:1:1:0:27:3.7%:41:5E-1:48:26:11:15:28 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:37:2:1:1:43:4.65%:60:2.4706E-1:44:41:21:20:46 0/0:0:0:0:0:18:0%:32:1E0:45:18:12:6:19 0/0:43:4:0:4:35:11.43%:35:5.7106E-2:43:31:19:12:36 0/0:38:1:0:1:28:3.57%:41:5E-1:44:27:15:12:28 0/0:60:2:1:1:33:6.06%:44:2.4615E-1:42:31:18:13:34 0/0:0:0:0:0:15:0%:29:1E0:46:15:9:6:15 0/0:34:1:0:1:16:6.25%:21:5E-1:47:15:8:7:17 0/0:45:3:0:3:17:17.65%:14:1.1364E-1:45:14:8:6:18 0/0:38:1:1:0:18:5.88%:24:5E-1:46:16:8:8:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:15:9:25 0/0:37:4:3:1:45:8.89%:50:5.8311E-2:41:41:20:21:46 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:48:4:2:2:42:9.52%:43:5.801E-2:46:38:19:19:45 0/0:38:3:1:2:35:8.57%:40:1.1957E-1:41:32:13:19:35 0/0:38:1:1:0:25:4%:38:5E-1:45:24:12:12:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:47:20:7:13:22 0/0:37:1:1:0:32:3.12%:48:5E-1:44:31:14:17:32 0/0:37:1:0:1:24:4.17%:34:5E-1:48:23:12:11:24 0/0:34:1:0:1:35:2.86%:55:5E-1:49:34:16:18:35 0/0:36:2:1:1:24:8.7%:28:2.4444E-1:45:21:14:7:26 0/0:48:4:2:2:34:11.76%:31:5.6946E-2:41:30:17:13:34 0/0:38:3:2:1:31:9.68%:34:1.1885E-1:45:28:11:17:32 0/0:60:1:0:1:28:3.57%:41:5E-1:43:27:16:11:28 0/0:35:2:2:0:62:3.23%:91:2.4797E-1:44:60:33:27:62 0/0:42:3:1:2:37:8.11%:43:1.1986E-1:44:34:17:17:37 0/0:38:2:2:0:45:4.44%:64:2.4719E-1:41:43:21:22:45 0/0:38:2:1:1:35:5.71%:47:2.4638E-1:42:33:18:15:35 0/0:38:1:1:0:34:3.03%:52:5E-1:47:32:20:12:35 0/0:38:2:2:0:27:7.69%:30:2.451E-1:45:24:12:12:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:37:1:0:1:29:3.45%:45:5E-1:45:28:14:14:32 0/0:45:3:3:0:28:10.71%:28:1.1818E-1:41:25:12:13:29 0/0:45:3:1:2:23:13.04%:22:1.1667E-1:46:20:7:13:23 0/0:38:1:1:0:29:3.45%:45:5E-1:40:28:12:16:29 0/0:43:4:1:3:37:10.81%:38:5.7399E-2:41:33:13:20:37 0/0:49:2:1:1:39:5.13%:54:2.4675E-1:47:37:20:17:39 0/0:38:1:1:0:16:6.25%:21:5E-1:45:15:9:6:16 0/0:37:2:2:0:38:5.26%:50:2.4667E-1:41:36:23:13:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:44:6:4:2:35:17.14%:25:1.238E-2:47:29:14:15:37 0/0:43:4:2:2:28:14.29%:23:5.5746E-2:40:24:12:12:28 0/1:41:7:4:3:51:13.73%:22:6.2693E-3:40:44:28:16:52 0/0:52:3:1:2:32:9.38%:34:1.1905E-1:41:29:15:14:34 0/0:47:2:0:2:20:10%:21:2.4359E-1:46:18:9:9:21 0/0:38:4:3:1:42:9.52%:43:5.801E-2:44:38:25:13:42 0/0:36:3:1:2:37:8.33%:40:1.1972E-1:52:33:19:14:40 0/0:60:2:1:1:35:5.71%:47:2.4638E-1:42:33:17:16:36 0/0:49:4:1:3:43:9.3%:47:5.8115E-2:41:39:26:13:47 0/0:42:4:2:2:41:9.76%:44:5.79E-2:41:37:24:13:41 0/0:44:3:2:1:31:9.68%:34:1.1885E-1:43:28:10:18:31 0/0:52:3:2:1:23:13.04%:22:1.1667E-1:46:20:7:13:24 0/0:49:2:1:1:56:3.57%:81:2.4775E-1:42:54:35:19:57 0/0:38:2:2:0:32:6.25%:40:2.4603E-1:44:30:25:5:32 0/0:49:5:1:4:39:12.82%:35:2.7273E-2:44:34:20:14:41 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:23 0/0:60:1:0:1:28:3.57%:41:5E-1:45:27:15:12:29 0/0:43:4:1:3:37:10.81%:38:5.7399E-2:46:33:18:15:37 0/0:49:2:0:2:31:6.45%:40:2.459E-1:53:29:12:17:32 0/0:36:2:1:1:29:6.9%:37:2.4561E-1:53:27:17:10:30 0/0:38:2:2:0:31:6.45%:40:2.459E-1:52:29:12:17:32 0/0:41:4:3:1:43:9.3%:47:5.8115E-2:41:39:19:20:44 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:37:1:1:0:35:2.86%:55:5E-1:43:34:21:13:36 0/0:37:3:2:1:37:8.11%:43:1.1986E-1:46:34:20:14:37 0/0:37:1:0:1:34:2.94%:51:5E-1:47:33:15:18:34 0/0:38:1:0:1:31:3.23%:48:5E-1:48:30:19:11:35 0/0:36:2:2:0:23:8.7%:28:2.4444E-1:41:21:9:12:23 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:47 0/0:38:1:0:1:40:2.5%:62:5E-1:41:39:26:13:43 0/0:34:2:1:1:25:8%:31:2.449E-1:48:23:9:14:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:38:1:0:1:27:3.7%:41:5E-1:42:26:16:10:27 0/0:45:3:2:1:27:11.11%:28:1.1792E-1:46:24:10:14:28 0/0:38:1:0:1:18:5.56%:24:5E-1:43:17:12:5:19 0/0:38:3:2:1:26:11.54%:25:1.1765E-1:47:23:12:11:26 0/0:43:4:1:3:27:14.81%:23:5.5494E-2:48:23:6:17:27 0/0:38:1:1:0:25:4%:38:5E-1:43:24:15:9:25 0/0:38:1:0:1:29:3.45%:45:5E-1:50:28:14:14:29 0/0:45:3:1:2:39:7.69%:47:1.2013E-1:40:36:21:15:40 0/0:37:5:1:4:39:12.82%:35:2.7273E-2:44:34:16:18:40 0/0:38:2:0:2:48:4.26%:67:2.4731E-1:43:45:29:16:51 0/0:37:2:1:1:30:6.67%:37:2.4576E-1:43:28:14:14:30 0/0:35:3:2:1:29:10.34%:31:1.1842E-1:42:26:17:9:29 0/0:38:4:2:2:32:12.9%:29:5.6405E-2:45:27:10:17:33 0/0:38:1:0:1:42:2.44%:66:5E-1:42:40:23:17:43 0/0:43:4:1:3:35:11.43%:35:5.7106E-2:44:31:20:11:40 0/0:49:2:0:2:27:7.41%:34:2.4528E-1:45:25:12:13:27 0/0:36:3:1:2:34:8.82%:37:1.194E-1:41:31:17:14:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:21:9:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:23 0/0:38:1:1:0:23:4.35%:34:5E-1:43:22:11:11:25 0/0:60:1:1:0:22:4.55%:31:5E-1:47:21:14:7:22 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:43:4:3:1:34:11.76%:31:5.6946E-2:43:30:8:22:34 0/0:38:2:0:2:35:5.71%:47:2.4638E-1:44:33:21:12:35 0/0:38:1:1:0:21:4.76%:31:5E-1:48:20:14:6:23 0/0:38:1:1:0:28:3.57%:41:5E-1:44:27:15:12:30 0/0:45:3:2:1:38:7.89%:43:1.2E-1:46:35:16:19:39 0/0:38:2:2:0:28:7.14%:34:2.4545E-1:45:26:12:14:28 0/0:52:3:0:3:40:7.5%:46:1.2025E-1:46:37:24:13:41 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:38 0/0:38:2:1:1:38:5.26%:50:2.4667E-1:40:36:23:13:38 0/0:49:4:2:2:38:10.53%:37:5.7534E-2:40:34:20:14:40 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:30 0/0:37:1:0:1:35:2.94%:51:5E-1:39:33:21:12:39 0/0:37:4:3:1:60:6.67%:71:5.9362E-2:44:56:35:21:60 0/0:38:4:2:2:55:7.41%:62:5.9012E-2:40:50:29:21:57 0/0:41:5:0:5:28:17.86%:19:2.5729E-2:42:23:14:9:28 0/0:38:1:1:0:35:2.86%:55:5E-1:43:34:25:9:35 0/0:41:5:4:1:54:9.26%:55:2.8371E-2:39:49:24:25:58 0/0:0:0:0:0:34:0%:62:1E0:39:34:18:16:35 0/0:38:4:2:2:40:10%:40:5.7784E-2:39:36:23:13:42 0/0:38:2:2:0:44:4.55%:60:2.4713E-1:42:42:25:17:49 0/0:37:5:2:3:43:11.63%:41:2.764E-2:40:38:24:14:43 0/0:29:3:1:2:39:7.5%:46:1.2025E-1:42:37:20:17:40 0/0:38:2:1:1:46:4.35%:63:2.4725E-1:40:44:30:14:46 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:34 0/0:0:0:0:0:36:0%:67:1E0:40:35:21:14:38 0/0:36:3:1:2:37:8.33%:40:1.1972E-1:40:33:18:15:41 0/0:37:2:2:0:52:3.92%:74:2.4752E-1:39:49:35:14:54 0/0:38:1:1:0:37:2.86%:55:5E-1:42:34:14:20:38 0/0:36:2:0:2:29:6.67%:37:2.4576E-1:42:28:17:11:31 0/0:38:2:0:2:61:3.28%:91:2.4793E-1:40:59:32:27:62 0/0:38:1:0:1:32:3.12%:48:5E-1:41:31:18:13:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:22:12:35 0/0:44:5:1:4:32:15.62%:24:2.6412E-2:41:27:19:8:33 0/0:38:2:1:1:31:6.45%:40:2.459E-1:45:29:23:6:33 0/0:0:0:0:0:21:0%:40:1E0:42:21:15:6:21 0/0:60:1:1:0:29:3.45%:45:5E-1:43:28:19:9:30 0/0:36:2:1:1:45:4.55%:60:2.4713E-1:46:42:18:24:46 0/0:45:3:1:2:40:7.5%:46:1.2025E-1:40:37:22:15:40 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:39:27:18:9:29 0/0:36:3:1:2:35:8.33%:40:1.1972E-1:41:33:15:18:36 0/0:60:1:1:0:37:2.78%:55:5E-1:44:35:20:15:38 0/0:43:4:1:3:46:8.7%:49:5.8402E-2:41:42:24:18:46 0/0:35:2:1:1:46:4.35%:63:2.4725E-1:41:44:22:22:47 MTB_anc 3663781 . CAATCCGGCA C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|inframe_deletion|MODERATE|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.94_102delAATCCGGCA|p.Asn32_Ala34del|94/534|94/534|32/177||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663782_3663790delAATCCGGCA||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663782_3663790delAATCCGGCA||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:41:6:2:4:46:13.04%:39:1.3136E-2:40:40:27:13:46 0/0:0:0:0:0:10:0%:17:1E0:47:10:4:6:11 0/0:43:6:4:2:43:13.95%:33:1.2905E-2:47:36:24:12:45 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:49:2:0:2:30:6.67%:37:2.4576E-1:42:28:19:9:32 0/0:35:2:0:2:21:9.52%:25:2.439E-1:40:19:11:8:21 0/0:0:0:0:0:28:0%:51:1E0:49:28:16:12:28 0/0:44:2:2:0:29:6.9%:37:2.4561E-1:42:27:15:12:31 0/0:0:0:0:0:29:0%:55:1E0:51:29:12:17:30 0/0:38:1:1:0:27:3.7%:41:5E-1:48:26:11:15:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:39 0/0:37:2:1:1:43:4.65%:60:2.4706E-1:43:41:21:20:46 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:43:4:0:4:35:11.43%:35:5.7106E-2:42:31:19:12:36 0/0:38:1:0:1:28:3.57%:41:5E-1:42:27:15:12:29 0/0:60:2:1:1:34:5.88%:43:2.4627E-1:41:32:18:14:35 0/0:0:0:0:0:14:0%:25:1E0:45:14:9:5:15 0/0:38:1:0:1:16:6.25%:21:5E-1:46:15:8:7:17 0/0:42:3:0:3:17:17.65%:14:1.1364E-1:47:14:8:6:18 0/0:38:1:1:0:18:5.88%:24:5E-1:47:16:8:8:20 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:25 0/0:37:4:3:1:47:8.51%:53:5.849E-2:41:43:21:22:47 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:33 0/0:46:5:3:2:42:11.9%:38:2.7555E-2:46:37:19:18:46 0/0:52:3:1:2:38:7.89%:43:1.2E-1:41:35:14:21:38 0/0:38:1:1:0:29:3.45%:45:5E-1:47:28:13:15:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:46:20:7:13:22 0/0:50:1:1:0:31:3.23%:48:5E-1:44:30:14:16:32 0/0:38:1:0:1:25:4%:38:5E-1:46:24:13:11:25 0/0:60:1:0:1:35:2.86%:55:5E-1:49:34:16:18:35 0/0:38:2:1:1:25:8.33%:27:2.4468E-1:45:22:15:7:28 0/0:49:4:2:2:32:12.5%:29:5.6596E-2:41:28:17:11:33 0/0:38:3:2:1:34:8.82%:37:1.194E-1:42:31:13:18:34 0/0:60:1:0:1:28:3.57%:41:5E-1:43:27:16:11:28 0/0:35:2:2:0:63:3.17%:95:2.48E-1:44:61:33:28:63 0/0:42:3:1:2:37:8.11%:43:1.1986E-1:44:34:17:17:37 0/0:37:2:2:0:45:4.44%:64:2.4719E-1:41:43:21:22:46 0/0:38:2:1:1:35:5.71%:47:2.4638E-1:42:33:18:15:35 0/0:38:1:1:0:35:2.94%:51:5E-1:46:33:21:12:36 0/0:38:2:2:0:28:7.41%:34:2.4528E-1:46:25:12:13:29 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:60:1:0:1:30:3.33%:44:5E-1:45:29:14:15:32 0/0:45:3:3:0:30:10%:31:1.1864E-1:42:27:12:15:30 0/0:40:3:1:2:23:13.04%:22:1.1667E-1:46:20:7:13:23 0/0:38:1:1:0:28:3.57%:41:5E-1:40:27:11:16:29 0/0:43:4:1:3:37:10.81%:38:5.7399E-2:42:33:13:20:37 0/0:49:2:1:1:38:5.26%:50:2.4667E-1:48:36:20:16:39 0/0:30:1:1:0:16:6.25%:21:5E-1:41:15:9:6:16 0/0:37:2:2:0:39:5.13%:54:2.4675E-1:39:37:23:14:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:29 0/0:45:6:4:2:35:17.14%:25:1.238E-2:46:29:14:15:36 0/0:43:4:2:2:28:14.29%:23:5.5746E-2:41:24:12:12:28 0/1:42:7:4:3:52:13.46%:22:6.2977E-3:39:45:29:16:52 0/0:49:3:1:2:34:8.82%:37:1.194E-1:41:31:16:15:34 0/0:49:2:0:2:22:9.09%:24:2.4419E-1:43:20:11:9:22 0/0:38:4:3:1:42:9.52%:43:5.801E-2:43:38:25:13:42 0/0:37:3:1:2:38:8.11%:43:1.1986E-1:52:34:21:13:40 0/0:60:2:1:1:35:5.71%:47:2.4638E-1:42:33:17:16:36 0/0:49:4:1:3:48:8.33%:52:5.8574E-2:41:44:28:16:50 0/0:43:4:2:2:40:10%:40:5.7784E-2:41:36:24:12:41 0/0:45:3:2:1:30:10%:31:1.1864E-1:41:27:10:17:31 0/0:52:3:2:1:24:12.5%:22:1.1702E-1:45:21:8:13:25 0/0:49:2:1:1:56:3.57%:81:2.4775E-1:42:54:35:19:57 0/0:38:2:2:0:32:6.25%:40:2.4603E-1:44:30:25:5:32 0/0:50:5:1:4:42:11.9%:38:2.7555E-2:43:37:22:15:44 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:60:1:0:1:28:3.57%:41:5E-1:44:27:15:12:29 0/0:43:4:1:3:35:11.43%:35:5.7106E-2:45:31:18:13:38 0/0:44:2:0:2:31:6.45%:40:2.459E-1:51:29:12:17:32 0/0:35:2:1:1:30:6.67%:37:2.4576E-1:52:28:18:10:31 0/0:38:2:2:0:31:6.45%:40:2.459E-1:53:29:12:17:32 0/0:40:4:3:1:43:9.3%:47:5.8115E-2:41:39:19:20:45 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:21 0/0:60:1:1:0:35:2.86%:55:5E-1:43:34:21:13:36 0/0:45:3:2:1:36:8.33%:40:1.1972E-1:46:33:20:13:37 0/0:37:1:0:1:34:2.94%:51:5E-1:46:33:15:18:34 0/0:38:1:0:1:32:3.12%:48:5E-1:46:31:19:12:36 0/0:38:2:2:0:23:8.7%:28:2.4444E-1:41:21:9:12:23 0/0:0:0:0:0:45:0%:85:1E0:43:45:27:18:47 0/0:38:1:0:1:43:2.33%:70:5E-1:40:42:29:13:44 0/0:38:2:1:1:24:8.33%:27:2.4468E-1:48:22:8:14:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:38:1:0:1:25:4%:38:5E-1:42:24:14:10:26 0/0:45:3:2:1:29:10.34%:31:1.1842E-1:45:26:12:14:30 0/0:38:1:0:1:19:5.26%:28:5E-1:42:18:13:5:20 0/0:38:3:2:1:27:11.11%:28:1.1792E-1:47:24:12:12:27 0/0:43:4:1:3:27:14.81%:23:5.5494E-2:46:23:6:17:27 0/0:38:1:1:0:24:4.17%:34:5E-1:43:23:15:8:25 0/0:38:1:0:1:29:3.45%:45:5E-1:49:28:14:14:29 0/0:52:3:1:2:40:7.5%:46:1.2025E-1:41:37:21:16:40 0/0:36:5:1:4:39:12.82%:35:2.7273E-2:44:34:17:17:40 0/0:38:2:0:2:50:4.08%:71:2.4742E-1:43:47:31:16:52 0/0:34:2:1:1:30:6.67%:37:2.4576E-1:43:28:14:14:30 0/0:36:3:2:1:28:10.71%:28:1.1818E-1:42:25:16:9:29 0/0:37:5:3:2:32:15.62%:24:2.6412E-2:46:27:11:16:33 0/0:38:1:0:1:40:2.56%:62:5E-1:42:38:22:16:43 0/0:41:4:1:3:36:11.11%:34:5.7257E-2:43:32:21:11:40 0/0:49:2:0:2:27:7.41%:34:2.4528E-1:44:25:12:13:27 0/0:37:3:1:2:32:9.38%:34:1.1905E-1:42:29:16:13:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:24 0/0:38:1:1:0:24:4.17%:34:5E-1:41:23:11:12:25 0/0:60:1:1:0:22:4.55%:31:5E-1:46:21:14:7:22 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:43:4:3:1:33:12.12%:32:5.6777E-2:43:29:8:21:34 0/0:38:2:0:2:36:5.56%:47:2.4648E-1:44:34:21:13:36 0/0:38:1:1:0:23:4.35%:34:5E-1:48:22:15:7:24 0/0:38:1:1:0:29:3.45%:45:5E-1:44:28:16:12:30 0/0:45:3:2:1:40:7.5%:46:1.2025E-1:45:37:17:20:41 0/0:38:2:2:0:26:7.69%:30:2.451E-1:45:24:11:13:28 0/0:48:3:0:3:40:7.5%:46:1.2025E-1:46:37:24:13:41 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:38 0/0:38:2:1:1:38:5.26%:50:2.4667E-1:39:36:23:13:39 0/0:49:4:2:2:40:10%:40:5.7784E-2:39:36:25:11:44 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:30 0/0:37:1:0:1:37:2.78%:55:5E-1:39:35:23:12:40 0/0:37:4:3:1:59:6.78%:72:5.9309E-2:44:55:34:21:60 0/0:38:4:2:2:55:7.41%:62:5.9012E-2:40:50:30:20:56 0/0:46:5:0:5:29:17.24%:22:2.5917E-2:42:24:15:9:29 0/0:38:1:1:0:35:2.86%:55:5E-1:44:34:25:9:35 0/0:42:5:4:1:57:8.77%:62:2.8522E-2:38:52:29:23:63 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:35 0/0:38:4:2:2:42:9.52%:43:5.801E-2:37:38:24:14:43 0/0:38:2:2:0:47:4.26%:67:2.4731E-1:41:45:28:17:50 0/0:37:5:2:3:41:12.2%:38:2.7465E-2:40:36:24:12:44 0/0:37:3:1:2:39:7.69%:47:1.2013E-1:42:36:20:16:40 0/0:38:2:1:1:45:4.44%:64:2.4719E-1:40:43:30:13:46 0/0:0:0:0:0:33:0%:63:1E0:38:33:14:19:34 0/0:0:0:0:0:34:0%:63:1E0:41:33:20:13:38 0/0:40:4:1:3:38:10.53%:37:5.7534E-2:40:34:19:15:40 0/0:37:2:2:0:53:3.85%:74:2.4757E-1:39:50:37:13:55 0/0:38:1:1:0:37:2.86%:55:5E-1:42:34:16:18:40 0/0:44:2:0:2:31:6.45%:40:2.459E-1:43:29:18:11:32 0/0:38:2:0:2:60:3.33%:88:2.479E-1:40:58:32:26:62 0/0:38:1:0:1:32:3.12%:48:5E-1:41:31:18:13:33 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:35 0/0:46:5:1:4:32:15.62%:24:2.6257E-2:42:26:18:8:34 0/0:38:2:1:1:31:6.45%:40:2.459E-1:45:29:23:6:33 0/0:0:0:0:0:21:0%:40:1E0:43:21:15:6:21 0/0:60:1:1:0:30:3.33%:44:5E-1:42:29:20:9:31 0/0:35:2:1:1:46:4.44%:64:2.4719E-1:44:43:19:24:47 0/0:44:3:1:2:39:7.69%:47:1.2013E-1:40:36:21:15:42 0/0:38:2:1:1:30:6.67%:37:2.4576E-1:39:28:19:9:30 0/0:52:3:1:2:37:8.11%:43:1.1986E-1:41:34:16:18:37 0/0:60:1:1:0:38:2.7%:59:5E-1:43:36:20:16:38 0/0:41:4:1:3:52:7.69%:59:5.8877E-2:40:48:27:21:52 0/0:46:2:1:1:47:4.26%:67:2.4731E-1:40:45:22:23:47 MTB_anc 3663826 . AGAAGTGAGTGACGGGAACGAGACGAACAATCCGGCCCCTGTGAGTCGAGTGAGCGGAACGAAC A . PASS AC=18;AF=0.060;AN=300;ANN=A|disruptive_inframe_deletion|MODERATE|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.245_307delGTCGAGTGAGCGGAACGAACGAAGTGAGTGACGGGAACGAGACGAACAATCCGGCCCCTGTGA|p.Ser82_Val102del|245/534|245/534|82/177||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663827_3663889delGAAGTGAGTGACGGGAACGAGACGAACAATCCGGCCCCTGTGAGTCGAGTGAGCGGAACGAAC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663827_3663889delGAAGTGAGTGACGGGAACGAGACGAACAATCCGGCCCCTGTGAGTCGAGTGAGCGGAACGAAC||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:15:11:4:40:37.5%:52:6.0618E-6:42:25:15:10:41 0/0:0:0:0:0:12:0%:21:1E0:46:12:6:6:13 0/0:49:4:2:2:47:8.51%:53:5.849E-2:45:43:29:14:49 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:47:27:18:9:32 0/0:38:2:2:0:16:12.5%:15:2.4194E-1:39:14:7:7:16 0/0:43:3:3:0:29:10.34%:31:1.1842E-1:45:26:13:13:30 0/0:49:2:1:1:28:7.14%:34:2.4545E-1:43:26:14:12:29 0/0:38:2:2:0:29:6.9%:37:2.4561E-1:52:27:9:18:30 0/0:36:3:1:2:27:11.11%:28:1.1792E-1:48:24:13:11:29 0/0:38:1:1:0:38:2.63%:58:5E-1:44:37:18:19:39 0/0:40:5:3:2:40:12.5%:35:2.7273E-2:42:34:15:19:43 0/0:60:1:1:0:21:4.76%:31:5E-1:46:20:12:8:21 0/0:38:1:1:0:31:3.23%:48:5E-1:42:30:20:10:35 0/0:36:2:2:0:24:8.33%:27:2.4468E-1:43:22:14:8:27 0/0:37:5:4:1:27:18.52%:19:2.5527E-2:42:22:12:10:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 0/0:36:4:4:0:12:33.33%:4:4.6584E-2:51:8:4:4:13 0/0:0:0:0:0:15:0%:29:1E0:43:15:6:9:16 0/0:0:0:0:0:17:0%:29:1E0:45:16:9:7:18 0/0:45:3:2:1:24:12.5%:22:1.1702E-1:43:21:13:8:26 0/1:42:19:11:8:46:41.3%:67:1.8161E-7:46:27:15:12:46 0/1:38:9:5:4:30:30%:30:9.678E-4:47:21:14:7:31 0/1:35:13:7:6:40:31.71%:44:3.9497E-5:50:28:17:11:42 0/1:38:13:4:9:35:37.14%:45:3.1103E-5:44:22:10:12:35 0/0:38:1:1:0:27:3.7%:41:5E-1:48:26:13:13:29 0/0:49:2:2:0:20:10%:21:2.4359E-1:45:18:10:8:22 0/0:44:3:0:3:24:12.5%:22:1.1702E-1:48:21:11:10:25 0/0:47:2:1:1:22:9.09%:24:2.4419E-1:47:20:12:8:24 0/0:38:1:1:0:22:4.55%:31:5E-1:42:21:9:12:22 0/0:43:3:2:1:35:8.57%:40:1.1957E-1:42:32:17:15:35 0/0:60:1:1:0:26:3.85%:38:5E-1:45:25:14:11:27 0/0:37:3:2:1:34:8.82%:37:1.194E-1:47:31:13:18:35 0/0:0:0:0:0:29:0%:51:1E0:44:28:19:9:30 0/0:52:3:1:2:32:9.38%:34:1.1905E-1:43:29:17:12:33 0/0:54:4:2:2:37:10.81%:38:5.7399E-2:41:33:16:17:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:23 0/1:44:7:4:3:60:11.67%:21:6.4922E-3:43:53:31:22:62 0/1:44:7:4:3:34:20.59%:22:5.5492E-3:44:27:14:13:35 0/1:40:7:3:4:40:17.5%:22:5.8688E-3:43:33:18:15:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:34 0/0:60:1:1:0:35:2.94%:51:5E-1:44:33:19:14:38 0/0:30:1:1:0:25:4.17%:34:5E-1:43:23:14:9:26 0/0:48:2:1:1:25:8%:31:2.449E-1:43:23:12:11:26 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:45:34:19:15:38 0/0:34:1:0:1:27:3.7%:41:5E-1:39:26:12:14:27 0/0:49:2:1:1:22:9.09%:24:2.4419E-1:50:20:7:13:22 0/0:37:4:2:2:24:16%:21:5.4928E-2:41:21:11:10:26 0/0:36:4:0:4:37:10.81%:38:5.7399E-2:41:33:15:18:37 0/0:49:2:2:0:37:5.41%:50:2.4658E-1:46:35:19:16:37 0/0:60:1:1:0:18:5.56%:24:5E-1:43:17:11:6:18 0/1:35:11:4:7:35:29.73%:36:2.0455E-4:44:26:17:9:39 0/1:44:9:6:3:29:31.03%:30:9.4048E-4:41:20:6:14:29 0/0:38:3:1:2:33:9.09%:37:1.1923E-1:45:30:15:15:34 0/0:38:2:2:0:29:6.9%:37:2.4561E-1:41:27:13:14:30 0/0:38:2:2:0:49:4.08%:71:2.4742E-1:41:47:29:18:51 0/0:49:2:0:2:31:6.45%:40:2.459E-1:45:29:16:13:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:39:1:1:0:44:2.27%:69:5E-1:42:43:28:15:47 0/0:55:2:1:1:41:5%:53:2.4684E-1:46:38:24:14:43 0/0:41:6:3:3:34:17.65%:23:1.2287E-2:45:28:14:14:36 0/1:33:17:5:12:44:36.17%:58:1.3018E-6:43:30:19:11:49 0/0:38:3:3:0:39:7.69%:47:1.2013E-1:43:36:19:17:41 0/0:49:4:2:2:27:14.81%:23:5.5494E-2:42:23:10:13:27 0/0:38:1:1:0:22:4.55%:31:5E-1:42:21:9:12:23 0/0:38:3:1:2:56:5.36%:72:1.2162E-1:43:53:35:18:59 0/0:60:1:0:1:28:3.57%:41:5E-1:44:27:22:5:29 0/0:49:2:0:2:46:4.35%:63:2.4725E-1:46:44:27:17:48 0/0:0:0:0:0:15:0%:29:1E0:54:15:9:6:17 0/0:38:1:1:0:22:4.55%:31:5E-1:49:21:8:13:23 0/0:60:2:2:0:38:5.26%:50:2.4667E-1:44:36:21:15:39 0/0:60:1:0:1:32:3.12%:48:5E-1:49:31:15:16:32 0/0:49:2:1:1:29:6.9%:37:2.4561E-1:49:27:17:10:30 0/0:60:1:0:1:29:3.45%:45:5E-1:44:28:13:15:30 0/0:54:4:1:3:40:10%:40:5.7784E-2:39:36:20:16:41 0/0:60:1:0:1:26:3.85%:38:5E-1:41:25:9:16:26 0/0:44:3:2:1:35:8.57%:40:1.1957E-1:44:32:20:12:36 0/0:45:2:1:1:39:5.13%:54:2.4675E-1:45:37:26:11:39 0/0:49:2:0:2:35:5.71%:47:2.4638E-1:45:33:16:17:35 0/1:30:10:6:4:29:32.26%:33:4.1251E-4:48:21:11:10:32 0/0:30:1:0:1:17:5.88%:24:5E-1:40:16:9:7:17 0/0:38:5:3:2:40:12.5%:35:2.7371E-2:43:35:21:14:43 0/1:37:10:7:3:38:26.32%:33:4.9525E-4:39:28:19:9:39 0/0:38:1:0:1:22:4.55%:31:5E-1:47:21:9:12:22 0/1:41:11:7:4:35:31.43%:37:1.9282E-4:43:24:9:15:35 0/0:38:4:4:0:25:16%:21:5.4928E-2:39:21:10:11:26 0/0:38:1:0:1:32:3.12%:48:5E-1:46:31:19:12:32 0/0:38:1:1:0:13:7.69%:18:5E-1:44:12:8:4:13 0/0:49:4:3:1:29:13.79%:26:5.5981E-2:46:25:13:12:30 0/0:46:5:2:3:27:18.52%:19:2.5527E-2:48:22:6:16:27 0/0:49:2:2:0:25:8%:31:2.449E-1:40:23:15:8:25 0/0:34:2:2:0:29:6.9%:37:2.4561E-1:50:27:12:15:29 0/0:38:2:1:1:34:5.88%:43:2.4627E-1:41:32:18:14:36 0/0:41:3:2:1:41:7.32%:50:1.2037E-1:44:38:17:21:41 0/1:38:14:8:6:47:29.79%:47:1.9604E-5:43:33:21:12:49 0/0:38:1:1:0:28:3.57%:41:5E-1:41:27:16:11:28 0/0:38:2:2:0:27:7.41%:34:2.4528E-1:41:25:16:9:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:30:4:2:2:44:8.89%:50:5.8311E-2:40:41:24:17:45 0/0:38:2:2:0:38:5.26%:50:2.4667E-1:43:36:21:15:41 0/0:38:2:1:1:24:8.33%:27:2.4468E-1:44:22:11:11:25 0/0:38:2:2:0:30:6.67%:37:2.4576E-1:41:28:17:11:32 0/0:60:1:0:1:25:4%:38:5E-1:40:24:17:7:28 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:20 0/0:34:1:0:1:23:4.35%:34:5E-1:39:22:14:8:23 0/0:38:1:1:0:21:4.76%:31:5E-1:43:20:11:9:21 0/0:49:2:2:0:37:5.41%:50:2.4658E-1:45:35:19:16:38 0/0:38:1:1:0:31:3.23%:48:5E-1:43:30:10:20:31 0/0:49:2:0:2:39:5.13%:54:2.4675E-1:42:37:24:13:39 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:24 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:25 0/1:37:12:3:9:35:32.43%:40:8.4418E-5:44:25:14:11:37 0/0:52:2:0:2:26:7.69%:30:2.451E-1:42:24:13:11:27 0/0:60:1:1:0:35:2.86%:55:5E-1:43:34:20:14:39 0/0:37:3:3:0:37:8.11%:43:1.1986E-1:38:34:18:16:39 0/0:38:1:1:0:39:2.56%:62:5E-1:40:38:18:20:40 0/0:38:1:1:0:43:2.33%:70:5E-1:39:42:23:19:46 0/0:38:4:3:1:32:12.5%:29:5.6596E-2:40:28:17:11:33 0/0:34:1:1:0:29:3.57%:41:5E-1:40:27:16:11:33 0/0:60:2:0:2:63:3.17%:95:2.48E-1:41:61:42:19:64 0/0:38:4:3:1:58:7.02%:68:5.9196E-2:39:53:30:23:59 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:38:2:2:0:31:6.45%:40:2.459E-1:39:29:18:11:31 0/1:37:21:13:8:52:39.62%:73:3.9927E-8:42:32:16:16:55 0/0:60:1:0:1:34:2.94%:51:5E-1:39:33:19:14:34 0/0:44:3:2:1:37:8.11%:43:1.1986E-1:36:34:23:11:37 0/0:38:2:2:0:48:4.17%:67:2.4737E-1:40:46:34:12:51 0/0:37:4:4:0:36:11.11%:34:5.7257E-2:39:32:18:14:38 0/0:38:3:3:0:35:8.57%:40:1.1957E-1:42:32:18:14:35 0/0:52:3:3:0:42:7.14%:49:1.2048E-1:40:39:23:16:46 0/0:43:4:3:1:32:12.5%:29:5.6596E-2:37:28:14:14:34 0/0:45:3:1:2:37:8.33%:40:1.1972E-1:39:33:22:11:38 0/0:49:2:1:1:38:5.26%:50:2.4667E-1:40:36:18:18:39 0/0:45:3:2:1:50:6.12%:63:1.2113E-1:39:46:32:14:52 0/0:0:0:0:0:39:0%:70:1E0:40:37:16:21:42 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:38:3:1:2:59:5.08%:79:1.2179E-1:38:56:30:26:60 0/0:38:1:1:0:34:2.94%:51:5E-1:42:33:20:13:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:32 0/0:49:2:2:0:26:7.69%:30:2.451E-1:48:24:18:6:30 0/0:38:1:1:0:23:4.35%:34:5E-1:40:22:16:6:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:32 0/0:49:2:1:1:42:4.88%:57:2.4691E-1:42:39:19:20:43 0/0:35:3:3:0:38:7.89%:43:1.2E-1:42:35:15:20:43 0/0:37:3:2:1:31:9.68%:34:1.1885E-1:40:28:16:12:33 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:42:34:15:19:39 0/0:45:3:3:0:39:7.89%:43:1.2E-1:41:35:18:17:41 0/1:39:10:6:4:45:22.22%:32:5.5766E-4:41:35:19:16:46 0/0:37:3:2:1:41:7.32%:50:1.2037E-1:42:38:20:18:42 MTB_anc 3663861 . CCCCTGTGAGTCGAGTGAGCGGAACGAA C . PASS AC=80;AF=0.268;AN=298;ANN=C|inframe_deletion|MODERATE|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.175_201delCCTGTGAGTCGAGTGAGCGGAACGAAC|p.Pro59_Asn67del|175/534|175/534|59/177||INFO_REALIGN_3_PRIME,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663862_3663888delCCCTGTGAGTCGAGTGAGCGGAACGAA||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663862_3663888delCCCTGTGAGTCGAGTGAGCGGAACGAA||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:52:6:2:4:32:35.29%:20:9.2021E-3:38:11:9:2:32 0/0:37:1:1:0:9:11.11%:8:5E-1:50:7:4:3:10 0/1:40:13:7:6:39:36.11%:44:3.2589E-5:44:23:16:7:44 0/0:34:3:1:2:19:15.79%:17:1.1486E-1:42:16:8:8:20 0/0:48:4:1:3:24:18.18%:15:5.3885E-2:41:18:13:5:25 0/0:40:5:1:4:15:38.46%:4:1.9565E-2:39:8:6:2:15 0/0:44:6:2:4:28:24%:14:1.1145E-2:44:19:11:8:28 0/0:36:3:2:1:17:20%:11:1.1207E-1:41:12:5:7:17 0/0:60:1:0:1:23:4.76%:31:5E-1:49:20:7:13:24 0/1:35:8:5:3:23:38.1%:27:1.7241E-3:45:13:7:6:26 0/1:38:7:2:5:31:22.58%:22:5.3469E-3:45:24:13:11:32 0/1:44:9:5:4:37:28.12%:29:1.0185E-3:38:23:10:13:38 0/0:38:1:1:0:17:6.25%:21:5E-1:46:15:9:6:18 0/1:38:13:4:9:27:48.15%:47:1.81E-5:38:14:11:3:29 0/1:35:6:2:4:19:33.33%:20:9.5308E-3:38:12:9:3:21 0/0:37:4:3:1:20:26.67%:8:4.9808E-2:40:11:5:6:21 0/0:37:4:2:2:14:28.57%:6:4.8889E-2:38:10:7:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:45:5:0:5:14:35.71%:4:2.037E-2:41:9:6:3:15 0/0:42:3:1:2:15:20%:11:1.1207E-1:44:12:8:4:16 0/0:37:4:1:3:20:23.53%:11:5.132E-2:40:13:9:4:22 0/0:46:4:3:1:40:19.05%:15:5.3471E-2:43:17:9:8:40 0/0:0:0:0:0:27:0%:32:1E0:41:18:12:6:27 0/0:48:6:3:3:33:30%:7:1.0098E-2:46:14:9:5:34 0/0:60:3:1:2:31:16.67%:14:1.1429E-1:39:15:7:8:32 0/0:49:2:1:1:22:9.52%:25:2.439E-1:49:19:8:11:25 0/0:37:3:2:1:16:21.43%:9:1.1111E-1:43:11:6:5:16 0/0:32:3:1:2:22:15%:16:1.1538E-1:47:17:9:8:23 0/0:0:0:0:0:16:0%:25:1E0:45:13:9:4:20 0/1:45:6:2:4:17:37.5%:20:8.837E-3:42:10:6:4:17 0/1:34:7:5:2:27:28%:23:4.8126E-3:40:18:9:9:29 0/1:37:7:4:3:24:30.43%:23:4.5803E-3:41:16:8:8:24 0/1:45:11:5:6:29:42.31%:38:1.2791E-4:48:15:5:10:29 0/0:48:6:3:3:22:27.27%:9:1.057E-2:42:16:12:4:24 0/1:47:9:3:6:27:37.5%:31:7.7962E-4:38:15:10:5:28 0/1:38:8:5:3:32:28.57%:26:2.188E-3:40:20:10:10:33 0/0:37:3:1:2:16:18.75%:11:1.129E-1:41:13:8:5:16 0/1:38:10:5:5:45:25.64%:32:5.0524E-4:42:29:17:12:46 0/0:47:6:4:2:29:27.27%:9:1.057E-2:43:16:9:7:32 0/1:45:8:4:4:35:28.57%:26:2.188E-3:39:20:9:11:35 0/1:46:8:5:3:27:29.63%:26:2.1337E-3:41:19:11:8:27 0/1:46:8:2:6:26:32%:26:2.0146E-3:44:17:7:10:27 0/1:49:6:5:1:19:31.58%:20:9.828E-3:43:13:7:6:21 0/0:25:3:1:2:21:15%:16:1.1538E-1:42:17:10:7:23 0/1:40:8:5:3:31:27.59%:26:2.2392E-3:45:21:13:8:33 0/1:37:7:4:3:22:33.33%:23:4.3101E-3:41:14:6:8:23 0/0:57:3:1:2:20:16.67%:14:1.1429E-1:46:15:5:10:20 0/0:34:4:3:1:22:21.05%:13:5.251E-2:38:15:7:8:23 0/1:46:9:5:4:29:36%:30:8.1542E-4:39:16:7:9:30 0/1:50:7:3:4:28:26.92%:23:4.9169E-3:43:19:12:7:30 0/0:40:5:3:2:17:31.25%:6:2.1691E-2:49:11:7:4:17 0/0:60:1:1:0:29:5.56%:24:5E-1:41:17:11:6:32 0/0:0:0:0:0:24:0%:29:1E0:42:15:3:12:24 0/1:44:8:4:4:26:34.78%:27:1.8791E-3:43:15:9:6:28 0/1:44:7:3:4:28:26.92%:23:4.9169E-3:39:19:10:9:28 0/1:35:15:8:7:39:39.47%:52:5.4463E-6:39:23:14:9:41 0/1:47:7:5:2:26:29.17%:23:4.7006E-3:39:17:8:9:28 0/1:39:6:2:4:18:33.33%:20:9.5308E-3:45:12:6:6:18 0/1:36:10:5:5:30:33.33%:33:3.9851E-4:39:20:13:7:32 0/1:47:12:8:4:36:35.29%:41:7.5302E-5:46:22:13:9:38 0/0:41:6:2:4:27:28.57%:9:1.0344E-2:39:15:8:7:27 0/0:45:4:1:3:43:15.38%:20:5.5222E-2:40:22:16:6:43 0/1:43:10:5:5:29:38.46%:34:3.3576E-4:41:16:8:8:29 0/1:41:6:3:3:21:35.29%:20:9.2021E-3:40:11:5:6:22 0/1:50:8:4:4:20:42.11%:28:1.5455E-3:38:11:2:9:22 0/1:39:14:6:8:48:30.43%:47:1.9039E-5:42:32:22:10:50 0/0:33:4:2:2:24:16.67%:18:5.461E-2:41:20:17:3:25 0/1:45:10:3:7:33:32.26%:33:4.1251E-4:45:21:13:8:36 0/0:32:3:1:2:10:27.27%:7:1.0714E-1:58:8:5:3:12 0/0:28:4:1:3:13:30.77%:6:4.7826E-2:51:9:4:5:14 0/1:45:15:8:7:30:53.57%:56:2.3037E-6:37:13:7:6:31 0/0:45:6:3:3:25:25%:11:1.0968E-2:47:18:7:11:26 0/0:40:3:1:2:21:15.79%:17:1.1486E-1:51:16:10:6:23 0/1:40:10:6:4:26:40%:34:3.1821E-4:43:15:4:11:27 0/1:40:8:5:3:36:25%:26:2.3764E-3:37:24:15:9:37 0/1:41:7:3:4:24:30.43%:23:4.5803E-3:40:16:6:10:24 0/1:40:7:5:2:27:29.17%:23:4.7006E-3:44:17:9:8:28 0/1:43:8:7:1:34:25%:26:2.3764E-3:43:24:16:8:34 0/0:46:5:2:3:21:26.32%:10:2.3166E-2:44:14:9:5:21 0/0:60:1:0:1:27:5.88%:24:5E-1:39:16:8:8:29 0/0:50:3:3:0:14:23.08%:9:1.1E-1:39:10:4:6:14 0/0:36:5:2:3:36:16.13%:24:2.6257E-2:39:26:15:11:37 0/0:33:1:0:1:32:4.55%:31:5E-1:38:21:14:7:34 0/0:50:3:2:1:16:20%:11:1.1207E-1:42:12:4:8:16 0/0:0:0:0:0:30:0%:37:1E0:42:19:7:12:30 0/0:36:5:1:4:21:27.78%:8:2.2727E-2:40:13:9:4:22 0/1:40:8:6:2:28:29.63%:26:2.1337E-3:44:19:11:8:29 0/0:60:1:0:1:10:11.11%:11:5E-1:42:8:5:3:11 0/1:37:8:5:3:26:34.78%:27:1.8791E-3:46:15:7:8:27 0/1:47:9:3:6:23:50%:32:5.1645E-4:49:9:3:6:23 0/0:41:6:5:1:22:30%:7:1.0098E-2:38:14:10:4:23 0/0:41:6:4:2:27:24%:14:1.1145E-2:46:19:8:11:27 0/1:40:9:3:6:25:37.5%:31:7.7962E-4:39:15:8:7:28 0/1:46:10:5:5:35:30.3%:33:4.3872E-4:39:23:11:12:36 0/0:52:3:0:3:37:13.04%:22:1.1667E-1:39:20:12:8:40 0/1:37:7:5:2:24:30.43%:23:4.5803E-3:40:16:7:9:24 0/1:42:8:6:2:21:42.11%:28:1.5455E-3:41:11:9:2:22 0/1:47:9:4:5:29:31.03%:30:9.4048E-4:40:20:8:12:29 0/1:40:10:7:3:38:29.41%:33:4.51E-4:39:24:14:10:39 0/1:45:9:3:6:29:32.14%:30:9.1169E-4:43:19:12:7:32 0/1:45:6:2:4:21:31.58%:20:9.828E-3:38:13:7:6:22 0/0:41:6:4:2:23:28.57%:9:1.0344E-2:40:15:10:5:24 0/0:37:4:4:0:19:22.22%:10:5.1948E-2:37:14:9:5:22 0/0:37:3:2:1:12:25%:6:1.087E-1:41:9:5:4:13 0/0:35:5:4:1:16:31.25%:6:2.1691E-2:37:11:6:5:17 0/0:35:2:1:1:13:16.67%:10:2.3913E-1:37:10:6:4:13 0/1:35:8:4:4:28:29.63%:26:2.1337E-3:43:19:11:8:29 0/0:50:6:4:2:22:28.57%:9:1.0344E-2:40:15:3:12:24 0/1:40:8:4:4:31:27.59%:26:2.2392E-3:41:21:14:7:32 0/0:42:5:4:1:21:23.81%:12:2.3921E-2:45:16:9:7:21 0/0:42:3:2:1:19:15.79%:17:1.1486E-1:36:16:11:5:20 0/0:44:3:2:1:32:15%:16:1.1538E-1:37:17:8:9:33 0/1:35:8:4:4:20:42.11%:28:1.5455E-3:40:11:5:6:21 0/1:34:9:4:5:30:30%:30:9.678E-4:43:21:13:8:33 0/0:31:4:2:2:27:16%:21:5.4928E-2:37:21:13:8:29 0/1:33:8:2:6:29:26.67%:26:2.2875E-3:36:22:14:8:32 0/1:42:8:4:4:34:24.24%:26:2.4173E-3:36:25:14:11:36 0/1:41:8:3:5:24:40%:27:1.638E-3:38:12:6:6:25 0/0:43:3:2:1:20:15.79%:17:1.1486E-1:37:16:8:8:22 0/1:41:16:12:4:47:35.56%:55:3.0122E-6:37:29:17:12:52 0/1:40:15:10:5:47:34.88%:51:6.9561E-6:37:28:11:17:47 0/1:38:9:1:8:22:39.13%:31:7.4174E-4:39:14:9:5:24 0/0:42:3:3:0:21:15.79%:17:1.1486E-1:39:16:9:7:23 0/0:44:5:4:1:42:23.81%:12:2.3921E-2:35:16:8:8:44 0/1:37:7:4:3:29:25%:22:5.1054E-3:38:21:12:9:30 0/1:42:9:5:4:28:36%:30:8.1542E-4:35:16:13:3:29 0/1:35:11:8:3:33:34.38%:37:1.7351E-4:39:21:15:6:36 0/0:45:6:3:3:29:24%:14:1.1145E-2:35:19:8:11:30 0/1:43:7:5:2:30:25.93%:22:5.0143E-3:39:20:8:12:30 0/1:40:12:5:7:34:38.71%:41:6.5329E-5:40:19:11:8:34 0/0:38:4:4:0:21:23.53%:11:5.132E-2:36:13:3:10:27 0/0:43:4:3:1:19:25%:8:5.0612E-2:40:12:7:5:22 0/1:40:8:3:5:30:28.57%:26:2.188E-3:38:20:11:9:31 0/1:42:7:5:2:33:23.33%:22:5.2713E-3:38:23:16:7:35 0/1:40:11:5:6:34:32.35%:37:1.8662E-4:36:23:11:12:35 0/0:45:3:0:3:21:13.64%:19:1.1628E-1:40:19:11:8:23 0/1:39:9:5:4:52:18.37%:28:1.3055E-3:35:40:23:17:55 0/1:34:7:3:4:29:24.14%:22:5.1909E-3:40:22:12:10:32 0/1:40:8:2:6:29:27.59%:26:2.2392E-3:42:21:12:9:29 0/1:37:10:2:8:23:41.67%:35:2.9985E-4:40:14:9:5:25 0/0:24:4:1:3:24:16.67%:18:5.461E-2:46:20:15:5:27 0/0:42:4:4:0:16:26.67%:8:4.9808E-2:40:11:6:5:16 0/1:43:7:6:1:26:26.92%:23:4.9169E-3:39:19:13:6:27 0/1:43:8:6:2:36:23.53%:26:2.4562E-3:42:26:12:14:37 0/1:40:11:3:8:36:32.35%:37:1.8662E-4:36:23:10:13:37 0/1:35:6:2:4:20:31.58%:20:9.828E-3:40:13:8:5:24 0/1:41:10:4:6:34:31.25%:33:4.259E-4:38:22:8:14:34 0/1:42:10:5:5:34:32.26%:33:4.1251E-4:39:21:10:11:35 0/0:46:4:1:3:34:16.67%:18:5.461E-2:39:20:12:8:36 0/1:42:9:5:4:35:28.12%:29:1.0185E-3:37:23:12:11:36 MTB_anc 3663889 . C A . PASS AC=87;AF=0.292;AN=298;ANN=A|missense_variant|MODERATE|accE5_Rv3281|gene3358|transcript|Transcript_gene3358|Coding|1/1|c.201C>A|p.Asn67Lys|201/534|201/534|67/177||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3663889C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3663889C>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:52:6:2:4:25:60%:22:5.418E-3:38:4:4:0:27 0/0:34:1:0:1:7:14.29%:8:5E-1:50:6:4:2:8 0/1:42:14:8:6:37:42.42%:49:1.0577E-5:43:19:15:4:39 0/0:30:3:1:2:15:20%:11:1.1207E-1:46:12:6:6:15 0/0:46:4:1:3:19:23.53%:11:5.132E-2:44:13:10:3:21 0/1:39:6:2:4:13:54.55%:22:6.192E-3:40:5:3:2:13 0/1:45:6:2:4:20:35.29%:20:9.2021E-3:44:11:6:5:20 0/0:35:4:2:2:15:30.77%:6:4.7826E-2:44:9:4:5:15 0/0:46:2:1:1:21:10.53%:21:2.4324E-1:46:17:6:11:22 0/1:42:9:6:3:20:52.94%:33:4.6348E-4:43:8:2:6:20 0/1:40:10:3:7:30:34.48%:34:3.8387E-4:38:19:10:9:30 0/1:43:10:6:4:29:41.67%:35:2.9985E-4:40:14:5:9:30 0/0:38:1:1:0:11:10%:11:5E-1:50:9:6:3:11 0/1:40:14:5:9:24:60.87%:54:3.4067E-6:35:9:7:2:25 0/0:41:5:2:3:14:41.67%:3:1.8634E-2:35:7:4:3:15 0/0:37:4:3:1:17:33.33%:4:4.6584E-2:45:8:3:5:18 0/0:37:4:2:2:10:40%:3:4.3344E-2:40:6:3:3:10 0/0:60:1:0:1:11:14.29%:8:5E-1:43:6:3:3:11 0/0:46:5:0:5:13:38.46%:4:1.9565E-2:44:8:5:3:13 0/0:44:3:1:2:10:30%:4:1.0526E-1:48:7:6:1:11 0/0:37:4:1:3:16:30.77%:6:4.7826E-2:45:9:7:2:18 0/0:47:4:3:1:33:28.57%:6:4.8889E-2:44:10:6:4:34 0/0:0:0:0:0:19:0%:17:1E0:44:10:6:4:19 0/1:48:6:3:3:30:35.29%:20:9.2021E-3:45:11:4:7:30 0/0:60:3:1:2:25:25%:6:1.087E-1:41:9:3:6:26 0/0:49:2:1:1:16:13.33%:16:2.4138E-1:43:13:4:9:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:41:4:2:2:22:21.05%:13:5.251E-2:42:15:8:7:22 0/0:36:3:1:2:14:25%:6:1.087E-1:39:9:6:3:14 0/1:45:6:2:4:14:46.15%:21:7.4534E-3:36:7:4:3:15 0/1:38:7:5:2:24:33.33%:23:4.3101E-3:38:14:8:6:24 0/1:36:7:4:3:20:36.84%:23:3.9926E-3:44:12:5:7:20 0/1:45:11:5:6:27:45.83%:39:1.1047E-4:45:13:5:8:27 0/1:48:6:3:3:18:33.33%:20:9.5308E-3:43:12:8:4:19 0/1:46:9:3:6:21:50%:32:5.1645E-4:35:9:6:3:21 0/1:39:8:5:3:27:34.78%:27:1.8791E-3:40:15:7:8:27 0/0:37:3:1:2:10:30%:4:1.0526E-1:43:7:4:3:11 0/1:40:11:6:5:41:32.35%:37:1.8662E-4:39:23:15:8:41 0/1:48:6:4:2:23:37.5%:20:8.837E-3:43:10:7:3:23 0/1:46:8:4:4:28:38.1%:27:1.7241E-3:39:13:5:8:28 0/1:46:8:5:3:23:34.78%:27:1.8791E-3:40:15:7:8:23 0/1:44:8:2:6:18:47.06%:28:1.3389E-3:43:9:4:5:19 0/1:48:6:5:1:17:35.29%:20:9.2021E-3:39:11:5:6:18 0/0:37:2:1:1:17:13.33%:16:2.4138E-1:38:13:6:7:18 0/1:36:8:5:3:29:30.77%:26:2.076E-3:47:18:12:6:30 0/1:37:7:4:3:19:38.89%:24:3.8123E-3:38:11:4:7:19 0/0:60:3:1:2:16:21.43%:9:1.1111E-1:45:11:4:7:16 0/0:43:4:3:1:20:25%:8:5.0612E-2:34:12:6:6:22 0/1:49:8:5:3:22:44.44%:28:1.4461E-3:37:10:4:6:24 0/1:50:7:3:4:25:30.43%:23:4.5803E-3:41:16:11:5:25 0/0:40:5:3:2:14:38.46%:4:1.9565E-2:45:8:5:3:14 0/0:60:1:1:0:24:7.69%:18:5E-1:41:12:7:5:25 0/0:0:0:0:0:19:0%:17:1E0:45:10:4:6:19 0/1:45:8:4:4:25:36.36%:27:1.8042E-3:39:14:9:5:25 0/1:46:7:3:4:25:30.43%:23:4.5803E-3:37:16:9:7:25 0/1:37:15:8:7:32:50%:55:2.9161E-6:35:15:8:7:32 0/0:49:6:4:2:23:28.57%:7:1.0098E-2:39:14:4:10:23 0/1:41:6:2:4:15:40%:20:8.4291E-3:38:9:5:4:15 0/1:39:10:5:5:28:37.04%:34:3.5253E-4:38:17:10:7:28 0/1:48:12:8:4:29:44.44%:42:5.0681E-5:45:15:5:10:30 0/1:41:6:2:4:24:33.33%:20:9.5308E-3:41:12:7:5:24 0/0:50:3:0:3:35:16.67%:14:1.1429E-1:41:15:10:5:36 0/1:43:10:5:5:24:47.62%:36:2.3971E-4:42:11:3:8:25 0/1:41:6:3:3:18:42.86%:20:7.971E-3:40:8:3:5:18 0/1:51:8:4:4:16:53.33%:29:1.0995E-3:36:7:0:7:16 0/1:42:14:6:8:41:36.84%:48:1.407E-5:43:24:18:6:43 0/0:43:4:2:2:20:21.05%:13:5.251E-2:40:15:12:3:21 0/1:46:10:3:7:30:35.71%:34:3.6855E-4:49:18:10:8:31 0/0:45:3:1:2:9:33.33%:4:1.0294E-1:49:6:4:2:10 0/0:37:4:1:3:12:36.36%:4:4.5113E-2:45:7:3:4:13 0/1:45:15:8:7:29:55.56%:56:2.0087E-6:37:12:7:5:30 0/0:45:6:3:3:23:27.27%:9:1.057E-2:48:16:6:10:23 0/0:47:4:2:2:17:26.67%:8:4.9808E-2:50:11:6:5:18 0/1:39:10:6:4:21:50%:36:2.1796E-4:42:10:3:7:22 0/1:40:8:5:3:26:36.36%:27:1.8042E-3:39:14:6:8:26 0/1:41:7:3:4:21:35%:23:4.158E-3:39:13:6:7:21 0/1:40:7:5:2:23:35%:23:4.158E-3:43:13:7:6:24 0/1:43:8:7:1:28:30.77%:26:2.076E-3:42:18:12:6:29 0/0:44:5:2:3:18:31.25%:6:2.1691E-2:43:11:6:5:18 0/0:60:1:0:1:27:5.88%:24:5E-1:41:16:9:7:28 0/0:47:4:4:0:12:36.36%:4:4.5113E-2:34:7:3:4:12 0/0:37:5:2:3:24:26.32%:10:2.3166E-2:45:14:7:7:26 0/0:34:1:0:1:23:7.69%:18:5E-1:38:12:6:6:24 0/0:47:4:3:1:12:36.36%:4:4.5113E-2:40:7:1:6:13 0/0:0:0:0:0:25:0%:25:1E0:43:14:5:9:25 0/0:39:5:1:4:19:33.33%:6:2.1073E-2:41:10:7:3:19 0/1:39:8:6:2:26:32%:26:2.0146E-3:45:17:8:9:26 0/0:60:1:0:1:10:11.11%:11:5E-1:39:8:5:3:10 0/1:43:8:5:3:22:44.44%:28:1.4461E-3:46:10:5:5:22 0/1:49:9:3:6:22:52.94%:33:4.6348E-4:48:8:3:5:22 0/1:41:6:5:1:18:37.5%:20:8.837E-3:39:10:6:4:18 0/0:41:6:4:2:23:28.57%:9:1.0344E-2:46:15:7:8:24 0/1:45:9:3:6:22:45%:32:6.1425E-4:38:11:5:6:23 0/1:48:10:5:5:29:38.46%:34:3.3576E-4:39:16:7:9:30 0/0:60:3:0:3:30:18.75%:11:1.129E-1:39:13:7:6:33 0/1:38:7:5:2:22:33.33%:23:4.3101E-3:36:14:5:9:22 0/1:43:8:6:2:17:53.33%:29:1.0995E-3:40:7:5:2:17 0/1:46:9:4:5:25:36%:30:8.1542E-4:37:16:7:9:25 0/1:39:10:7:3:33:34.48%:34:3.8387E-4:42:19:10:9:34 0/1:47:9:3:6:29:33.33%:30:8.8132E-4:41:18:10:8:30 0/1:44:6:2:4:15:46.15%:21:7.4534E-3:36:7:3:4:15 0/1:39:7:5:2:18:43.75%:24:3.3988E-3:41:9:5:4:19 0/0:36:5:5:0:14:38.46%:4:1.9565E-2:39:8:4:4:16 0/0:36:4:3:1:10:40%:3:4.3344E-2:34:6:4:2:11 0/0:39:5:4:1:13:41.67%:3:1.8634E-2:33:7:3:4:13 0/0:35:3:1:2:12:27.27%:7:1.0714E-1:38:8:5:3:12 0/1:39:9:4:5:26:37.5%:31:7.7962E-4:42:15:8:7:26 0/1:49:7:5:2:18:41.18%:24:3.6151E-3:39:10:2:8:18 0/1:39:8:4:4:27:32%:27:1.949E-3:38:16:10:6:27 0/0:42:5:4:1:16:31.25%:6:2.1691E-2:45:11:7:4:16 0/0:43:3:2:1:12:25%:6:1.087E-1:34:9:5:4:12 0/0:45:3:2:1:26:21.43%:9:1.1111E-1:38:11:5:6:26 0/1:39:8:4:4:16:57.14%:30:9.6618E-4:36:6:2:4:16 0/1:39:9:4:5:27:34.62%:30:8.4928E-4:41:17:12:5:28 0/0:37:4:2:2:20:23.53%:11:5.132E-2:39:13:8:5:21 0/1:37:8:2:6:25:33.33%:27:1.949E-3:36:16:10:6:27 0/1:41:8:4:4:24:34.78%:27:1.8791E-3:38:15:8:7:25 0/1:39:10:4:6:23:52.63%:37:1.9541E-4:40:9:5:4:23 0/0:45:3:2:1:18:17.65%:14:1.1364E-1:37:14:7:7:20 0/1:41:17:13:4:37:48.57%:62:5.7598E-7:38:18:9:9:38 0/1:40:16:10:6:36:50%:59:1.2304E-6:39:16:4:12:37 0/1:41:9:1:8:20:45%:32:6.1425E-4:41:11:7:4:20 0/0:41:3:3:0:17:20%:11:1.1207E-1:38:12:8:4:17 0/0:46:5:4:1:35:35.71%:4:2.037E-2:35:9:3:6:35 0/1:37:7:4:3:22:33.33%:23:4.3101E-3:40:14:7:7:25 0/1:41:9:5:4:21:50%:32:5.1645E-4:33:9:7:2:22 0/1:39:11:8:3:27:44%:39:1.1933E-4:38:14:8:6:28 0/0:48:6:3:3:25:28.57%:9:1.0344E-2:36:15:6:9:26 0/1:43:7:5:2:25:31.82%:23:4.4505E-3:35:15:5:10:25 0/1:42:12:5:7:29:46.15%:43:4.6796E-5:38:14:6:8:29 0/0:37:4:4:0:17:30.77%:6:4.7826E-2:36:9:3:6:17 0/0:43:4:3:1:17:28.57%:6:4.8889E-2:41:10:6:4:19 0/1:45:8:3:5:23:38.1%:27:1.7241E-3:37:13:7:6:23 0/1:44:7:5:2:24:33.33%:23:4.3101E-3:37:14:9:5:26 0/1:41:10:4:6:25:40%:34:3.1821E-4:37:15:5:10:27 0/0:52:3:0:3:18:16.67%:14:1.1429E-1:40:15:9:6:18 0/1:40:9:5:4:39:25%:29:1.0857E-3:36:26:12:14:39 0/1:39:7:3:4:26:28%:23:4.8126E-3:39:18:12:6:27 0/1:40:8:2:6:23:34.78%:27:1.8791E-3:36:15:7:8:23 0/1:41:10:2:8:22:45.45%:35:2.6061E-4:39:12:9:3:22 0/0:43:4:1:3:21:21.05%:13:5.251E-2:42:15:11:4:21 0/0:39:5:5:0:13:41.67%:3:1.8634E-2:41:7:5:2:13 0/1:42:7:6:1:18:38.89%:24:3.8123E-3:44:11:7:4:20 0/1:42:8:6:2:30:28.57%:26:2.188E-3:42:20:10:10:31 0/1:43:11:3:8:29:42.31%:38:1.2791E-4:36:15:5:10:29 0/1:45:6:2:4:19:37.5%:20:8.837E-3:40:10:6:4:20 0/1:41:10:4:6:27:40%:34:3.1821E-4:36:15:6:9:28 0/1:42:10:5:5:27:41.67%:35:2.9985E-4:39:14:4:10:27 0/0:48:4:1:3:32:18.18%:15:5.3885E-2:41:18:11:7:32 0/1:42:9:5:4:28:36%:30:8.1542E-4:39:16:6:10:28 MTB_anc 3670040 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv3289c_Rv3289c|gene3366|transcript|Transcript_gene3366|Coding|1/1|c.372A>G|p.Ala124Ala|372/378|372/378|124/125||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3670040T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3670040T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:51:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:57:31:26:58:98.28%:99:9.6072E-33:60:1:1:0:58 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:36:16:20:37:97.3%:99:2.1762E-20:50:1:1:0:37 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:52 1/1:47:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:81:51:30:81:100%:99:2.7329E-48:0:0:0:0:81 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:56:39:17:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:23:15:8:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:57:31:26:58:98.28%:99:9.6072E-33:39:1:0:1:59 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:50:22:28:51:98.04%:99:1.3013E-28:32:1:0:1:51 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:36:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:61:25:36:61:100%:99:2.609E-36:0:0:0:0:63 1/1:45:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 3678517 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|lhr_Rv3296|gene3373|transcript|Transcript_gene3373|Coding|1/1|c.1743C>A|p.Asp581Glu|1743/4542|1743/4542|581/1513||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3678517C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3678517C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:45:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:43:24:15:9:25:96%:99:2.0568E-13:38:1:1:0:26 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:37:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:73:37:36:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:36:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:35:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:30:13:17:31:96.77%:99:6.8754E-17:38:1:1:0:31 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 3679949 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|lhr_Rv3296|gene3373|transcript|Transcript_gene3373|Coding|1/1|c.3175G>A|p.Glu1059Lys|3175/4542|3175/4542|1059/1513||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3679949G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3679949G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:31:6:25:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:32:12:20:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:45:65:22:43:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:39:9:30:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:37:10:27:38:97.37%:99:5.7269E-22:0:0:0:0:42 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:29:18:11:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:35:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:31:16:15:32:96.88%:99:1.8007E-17:35:1:1:0:32 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 3681548 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|nei_Rv3297|gene3374|transcript|Transcript_gene3374|Coding|1/1|c.229C>A|p.Arg77Arg|229/768|229/768|77/255||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3681548C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3681548C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:52:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:53:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:53:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:17:5:12:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:78:38:40:78:100%:99:1.7165E-46:0:0:0:0:79 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:52:16:36:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:23:12:11:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:38:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:70:37:33:70:100%:99:1.0659E-41:0:0:0:0:76 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 3683841 . G T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|atsB_Rv3299c|gene3376|transcript|Transcript_gene3376|Coding|1/1|c.2123C>A|p.Pro708Gln|2123/2913|2123/2913|708/970||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3683841G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3683841G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:0:0:0:0:47:0%:89:1E0:45:47:18:29:47 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:39:1:1:0:35:2.86%:55:5E-1:52:34:14:20:35 0/0:0:0:0:0:22:0%:40:1E0:46:22:7:15:23 0/0:0:0:0:0:25:0%:48:1E0:52:25:18:7:27 0/0:0:0:0:0:32:0%:59:1E0:47:32:22:10:32 0/0:0:0:0:0:29:0%:55:1E0:51:29:15:14:29 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:41 0/0:0:0:0:0:24:0%:44:1E0:51:24:14:10:25 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:49 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:22 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:49:31:13:18:32 0/0:0:0:0:0:17:0%:33:1E0:46:17:13:4:17 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:16:8:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:31 0/0:37:1:1:0:30:3.33%:44:5E-1:48:29:12:17:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:35 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:60:0%:99:1E0:49:60:34:26:60 0/0:0:0:0:0:48:0%:89:1E0:44:48:25:23:48 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:37 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:42:0%:77:1E0:46:42:25:17:45 0/0:0:0:0:0:19:0%:37:1E0:49:19:13:6:19 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:16:0%:29:1E0:39:16:6:10:16 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:47 0/0:0:0:0:0:32:0%:59:1E0:46:32:11:21:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:18:7:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:50:0%:92:1E0:44:50:33:17:51 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:49:0%:93:1E0:49:49:20:29:49 0/0:0:0:0:0:75:0%:99:1E0:46:75:37:38:75 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:12:0%:21:1E0:47:12:7:5:12 0/0:60:1:1:0:12:8.33%:14:5E-1:45:11:7:4:13 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:31:0%:59:1E0:54:31:16:15:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:39:0%:74:1E0:42:39:28:11:40 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:32 0/0:0:0:0:0:17:0%:33:1E0:43:17:12:5:17 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:49 0/0:38:1:1:0:29:3.45%:45:5E-1:41:28:12:16:29 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:44 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:14:0%:25:1E0:46:14:8:6:14 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:39:0%:74:1E0:40:39:14:25:41 0/0:0:0:0:0:37:0%:70:1E0:40:37:17:20:38 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:42 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:34 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 0/0:0:0:0:0:55:0%:99:1E0:42:55:30:25:57 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:21 0/0:0:0:0:0:52:0%:96:1E0:41:52:27:25:54 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:41 0/0:0:0:0:0:56:0%:99:1E0:43:56:26:30:56 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:36 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:47 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:69:0%:99:1E0:39:69:30:39:70 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:30:16:47 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:13:5:18 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:26:14:41 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:24 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:38:2:1:1:49:4.08%:71:2.4742E-1:41:47:21:26:50 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 MTB_anc 3684204 . C A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|atsB_Rv3299c|gene3376|transcript|Transcript_gene3376|Coding|1/1|c.1760G>T|p.Gly587Val|1760/2913|1760/2913|587/970||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3684204C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3684204C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:42:54:22:32:54 0/0:0:0:0:0:15:0%:29:1E0:44:15:9:6:15 0/0:0:0:0:0:49:0%:93:1E0:45:49:29:20:49 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:7:20:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:23 0/0:0:0:0:0:36:0%:66:1E0:49:36:17:19:36 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:25 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:48:28:10:18:28 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:34 0/0:0:0:0:0:48:0%:89:1E0:41:48:22:26:49 0/0:0:0:0:0:14:0%:25:1E0:51:14:6:8:14 0/0:0:0:0:0:47:0%:89:1E0:45:47:29:18:49 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:19:0%:37:1E0:45:19:4:15:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:46 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:20 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:23 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:28 0/0:32:1:0:1:37:2.7%:59:5E-1:41:36:24:12:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:34 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:42 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:49:0%:93:1E0:45:49:22:27:50 0/0:0:0:0:0:48:0%:89:1E0:44:48:19:29:48 0/0:0:0:0:0:52:0%:96:1E0:49:52:21:31:53 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:48:0%:89:1E0:44:48:19:29:50 0/0:0:0:0:0:24:0%:44:1E0:41:23:12:11:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:9:19:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:44:0%:81:1E0:44:44:21:23:44 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:14:27:41 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:49 0/0:0:0:0:0:21:0%:40:1E0:44:21:5:16:21 0/0:0:0:0:0:43:0%:82:1E0:45:43:18:25:43 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:54:0%:99:1E0:41:54:19:35:54 0/0:0:0:0:0:47:0%:89:1E0:40:47:20:27:48 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:40 0/0:0:0:0:0:39:0%:74:1E0:45:39:12:27:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:11:21:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:35 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:48 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:46 0/0:0:0:0:0:84:0%:99:1E0:44:84:34:50:85 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:41 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:21 0/0:0:0:0:0:38:0%:70:1E0:48:38:14:24:38 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:49:34:13:21:34 0/0:0:0:0:0:30:0%:55:1E0:50:30:13:17:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:12:22:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:9:20:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:32 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:32:0%:59:1E0:47:32:12:20:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:49:0%:93:1E0:40:49:18:31:49 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:39 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:18:0%:32:1E0:40:18:6:12:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:20:0%:36:1E0:39:20:15:5:20 0/0:0:0:0:0:43:0%:82:1E0:41:43:25:18:43 0/0:0:0:0:0:45:0%:85:1E0:40:45:29:16:45 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:46 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:29 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:18 0/0:0:0:0:0:75:0%:99:1E0:43:75:36:39:75 0/0:0:0:0:0:58:0%:99:1E0:42:58:28:30:58 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:13:25:41 0/0:0:0:0:0:39:0%:74:1E0:40:39:15:24:41 0/0:0:0:0:0:39:0%:74:1E0:38:39:20:19:40 0/0:0:0:0:0:43:0%:82:1E0:39:43:17:26:43 0/0:0:0:0:0:50:0%:92:1E0:38:50:24:26:50 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:38 0/0:0:0:0:0:43:0%:82:1E0:38:43:19:24:44 0/0:0:0:0:0:40:0%:74:1E0:39:40:21:19:42 0/0:0:0:0:0:51:0%:97:1E0:41:51:23:28:51 0/0:0:0:0:0:33:0%:63:1E0:37:33:17:16:35 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:38 0/0:0:0:0:0:46:0%:85:1E0:42:46:18:28:48 0/0:0:0:0:0:58:0%:99:1E0:39:58:31:27:58 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:42 0/0:0:0:0:0:38:0%:70:1E0:40:38:11:27:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:33 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:44 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:37 0/0:0:0:0:0:50:0%:92:1E0:42:50:19:31:51 0/0:49:1:0:1:55:1.82%:91:5E-1:42:54:26:28:55 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:29 MTB_anc 3685251 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|atsB_Rv3299c|gene3376|transcript|Transcript_gene3376|Coding|1/1|c.713C>T|p.Thr238Met|713/2913|713/2913|238/970||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3685251G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3685251G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:55:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:55:36:19:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:14:13:28:96.43%:99:3.7915E-15:37:1:1:0:30 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:34:17:17:35:97.14%:99:3.2089E-19:38:1:1:0:37 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:77:33:44:77:100%:99:6.8219E-46:0:0:0:0:80 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:63:35:28:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:31:16:15:32:96.88%:99:1.8007E-17:31:1:1:0:32 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:16:10:6:17:94.12%:81:7.7134E-9:24:1:0:1:17 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 3689802 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|lpdA_Rv3303c|gene3380|transcript|Transcript_gene3380|Coding|1/1|c.1137C>A|p.Ala379Ala|1137/1482|1137/1482|379/493||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3689802G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3689802G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:27:17:10:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:52:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:60:25:35:60:100%:99:1.035E-35:0:0:0:0:62 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:65:37:28:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:23:13:10:24:95.83%:99:7.7525E-13:26:1:1:0:24 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 3690016 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|lpdA_Rv3303c|gene3380|transcript|Transcript_gene3380|Coding|1/1|c.923C>T|p.Ser308Leu|923/1482|923/1482|308/493||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3690016G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3690016G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:45:25:20:46:97.83%:99:1.1441E-25:60:1:1:0:48 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:51:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:73:36:37:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:53:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 3690950 . T TAGCTCGGCGACGATGCACGCCGCGCAGCGGCGTGAGGAGGAGCCGAGCAGTCCAACAC . PASS AC=1;AF=3.333e-03;AN=300;ANN=TAGCTCGGCGACGATGCACGCCGCGCAGCGGCGTGAGGAGGAGCCGAGCAGTCCAACAC|intergenic_region|MODIFIER|lpdA_Rv3303c-Rv3304_Rv3304|gene3380-gene3381|intergenic_region|gene3380-gene3381|||n.3690950_3690951insAGCTCGGCGACGATGCACGCCGCGCAGCGGCGTGAGGAGGAGCCGAGCAGTCCAACAC||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:33:1:0:1:38:2.63%:58:5E-1:42:37:21:16:38 0/0:60:2:0:2:17:11.76%:18:2.4242E-1:51:15:8:7:18 0/0:49:4:1:3:37:10.81%:38:5.7399E-2:47:33:15:18:38 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:16 0/0:0:0:0:0:21:0%:40:1E0:41:21:18:3:22 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:39:1:1:0:24:4.17%:34:5E-1:46:23:15:8:24 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:24 0/0:35:2:2:0:28:7.14%:34:2.4545E-1:47:26:17:9:28 0/0:49:2:2:0:31:6.45%:37:2.4576E-1:44:28:23:5:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:35 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:38:4:1:3:30:13.33%:26:5.5981E-2:45:25:18:7:31 0/0:38:2:1:1:20:10%:21:2.4324E-1:46:17:9:8:20 0/0:37:1:0:1:12:8.33%:14:5E-1:48:10:4:6:12 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:52:3:2:1:27:11.11%:28:1.1792E-1:44:24:12:12:27 0/0:48:2:1:1:24:8.33%:27:2.4468E-1:41:22:12:10:24 0/0:37:1:1:0:34:2.94%:51:5E-1:44:33:22:11:36 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:25 0/0:37:2:0:2:37:5.41%:50:2.4658E-1:43:35:22:13:38 0/0:48:2:1:1:28:7.14%:34:2.4545E-1:45:26:17:9:29 0/0:0:0:0:0:26:0%:47:1E0:51:26:14:12:26 0/0:33:2:0:2:28:7.14%:34:2.4528E-1:42:25:16:9:28 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:18 0/0:33:1:0:1:37:2.7%:59:5E-1:43:36:18:18:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:25:10:36 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:15:0%:29:1E0:46:15:10:5:15 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:19 0/0:39:2:2:0:28:7.14%:34:2.4545E-1:48:26:15:11:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/1:35:7:4:3:35:19.44%:22:5.6667E-3:42:29:18:11:38 0/0:0:0:0:0:37:0%:70:1E0:49:37:22:15:39 0/0:43:4:3:1:47:8.51%:53:5.849E-2:43:43:32:11:48 0/0:33:1:0:1:26:3.85%:38:5E-1:43:25:13:12:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:37:1:0:1:32:3.12%:48:5E-1:44:31:13:18:34 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:49:2:2:0:28:7.14%:34:2.4545E-1:44:26:13:13:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:60:1:0:1:24:4.17%:34:5E-1:44:23:15:8:26 0/0:37:2:1:1:43:4.65%:57:2.4699E-1:43:40:24:16:43 0/0:43:4:2:2:37:10.81%:34:5.7257E-2:43:32:19:13:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 0/0:45:3:2:1:19:15.79%:17:1.1486E-1:47:16:11:5:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:36 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:39:1:0:1:27:3.7%:41:5E-1:43:26:16:10:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:32:1:1:0:37:2.7%:59:5E-1:43:36:19:17:37 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:60:1:1:0:23:4.35%:34:5E-1:43:22:8:14:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:25 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:60:2:0:2:58:3.45%:84:2.4779E-1:47:55:31:24:59 0/0:35:1:0:1:24:4.17%:34:5E-1:45:23:15:8:24 0/0:46:3:1:2:27:11.11%:28:1.1792E-1:44:24:13:11:27 0/0:33:1:0:1:18:5.56%:24:5E-1:44:17:11:6:18 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:28 0/0:0:0:0:0:19:0%:37:1E0:49:19:10:9:19 0/0:0:0:0:0:23:0%:44:1E0:50:23:10:13:23 0/0:46:5:2:3:36:13.89%:30:2.6822E-2:40:30:16:14:38 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:24 0/0:38:2:2:0:29:6.9%:34:2.4545E-1:42:26:18:8:29 0/0:0:0:0:0:13:0%:25:1E0:47:13:8:5:14 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:23 0/0:52:3:1:2:26:11.54%:25:1.1765E-1:40:23:11:12:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:37 0/0:0:0:0:0:19:0%:37:1E0:51:19:12:7:19 0/0:39:1:1:0:21:4.76%:31:5E-1:41:20:13:7:21 0/0:37:2:0:2:28:7.14%:34:2.4528E-1:39:25:14:11:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:43:4:3:1:19:21.05%:13:5.251E-2:43:15:9:6:19 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:15 0/0:0:0:0:0:17:0%:33:1E0:47:17:13:4:18 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:26:0%:47:1E0:49:26:16:10:27 0/0:38:2:1:1:40:5%:53:2.4684E-1:40:38:21:17:41 0/0:0:0:0:0:24:0%:44:1E0:43:24:16:8:26 0/0:39:1:0:1:43:2.33%:66:5E-1:41:41:23:18:43 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:17 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:23 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:38:1:1:0:26:3.85%:38:5E-1:42:25:16:9:26 0/0:38:5:3:2:27:17.86%:19:2.5729E-2:41:23:15:8:29 0/0:38:3:3:0:26:11.54%:25:1.1765E-1:43:23:13:10:26 0/0:39:1:1:0:26:3.85%:38:5E-1:42:25:11:14:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:24 0/0:38:3:1:2:28:10.71%:28:1.1818E-1:44:25:17:8:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:24 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:28 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:21 0/0:39:1:1:0:28:3.57%:41:5E-1:39:27:11:16:28 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:34 0/0:32:1:1:0:27:3.7%:38:5E-1:37:25:17:8:28 0/0:37:1:0:1:33:3.03%:52:5E-1:41:32:20:12:34 0/0:38:2:1:1:16:12.5%:15:2.4194E-1:41:14:9:5:16 0/0:38:3:3:0:47:6.38%:59:1.2097E-1:42:44:26:18:47 0/0:41:6:2:4:48:12.5%:41:1.3237E-2:42:42:22:20:48 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:18 0/0:38:3:1:2:37:8.11%:43:1.1986E-1:38:34:19:15:40 0/0:37:2:1:1:32:6.25%:40:2.4603E-1:40:30:18:12:35 0/0:32:5:2:3:38:12.82%:35:2.7273E-2:41:34:18:16:39 0/0:33:1:0:1:24:4.17%:34:5E-1:39:23:12:11:24 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:34 0/0:38:3:1:2:28:10.71%:28:1.1818E-1:41:25:17:8:28 0/0:39:1:0:1:29:3.45%:45:5E-1:43:28:15:13:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:28 0/0:37:2:0:2:47:4.26%:67:2.4731E-1:39:45:27:18:48 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:28 0/0:38:2:2:0:38:5.26%:50:2.4667E-1:40:36:18:18:39 0/0:37:3:1:2:33:9.09%:37:1.1923E-1:43:30:10:20:34 0/0:38:3:2:1:36:8.33%:37:1.194E-1:39:31:18:13:36 0/0:37:1:1:0:30:3.33%:44:5E-1:42:29:20:9:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:41 0/0:46:3:0:3:44:6.82%:53:1.2069E-1:43:41:23:18:45 0/0:39:1:0:1:19:5.26%:28:5E-1:42:18:10:8:19 0/0:37:4:0:4:25:16%:21:5.4928E-2:40:21:13:8:25 0/0:37:4:2:2:32:12.5%:29:5.6596E-2:44:28:14:14:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:27:8:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:45:3:1:2:29:10.34%:31:1.1842E-1:41:26:16:10:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:33:2:1:1:28:7.14%:34:2.4545E-1:43:26:18:8:29 MTB_anc 3691003 . C A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|intergenic_region|MODIFIER|lpdA_Rv3303c-Rv3304_Rv3304|gene3380-gene3381|intergenic_region|gene3380-gene3381|||n.3691003C>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:60:0%:99:1E0:47:60:28:32:72 0/0:0:0:0:0:28:0%:51:1E0:51:28:12:16:30 0/0:0:0:0:0:65:0%:99:1E0:46:65:36:29:70 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:28:5:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:34:0%:62:1E0:47:34:22:12:37 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:31 0/0:0:0:0:0:23:0%:44:1E0:51:23:16:7:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:22:8:34 0/0:54:1:0:1:29:3.45%:45:5E-1:53:28:21:7:35 0/0:0:0:0:0:48:0%:89:1E0:47:48:31:17:57 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:29 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:61 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:40:0%:74:1E0:50:40:25:15:51 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:30 0/0:0:0:0:0:24:0%:44:1E0:45:23:13:10:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:45 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:40 0/0:0:0:0:0:49:0%:93:1E0:46:49:35:14:55 0/0:60:1:0:1:33:3.03%:52:5E-1:48:32:16:16:33 0/0:0:0:0:0:45:0%:85:1E0:44:45:29:16:50 0/0:0:0:0:0:44:0%:81:1E0:48:44:28:16:48 0/0:38:1:1:0:37:2.7%:59:5E-1:44:36:15:21:37 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:49 0/0:0:0:0:0:53:0%:99:1E0:45:53:24:29:57 0/0:0:0:0:0:47:0%:89:1E0:47:47:27:20:53 0/0:0:0:0:0:33:0%:63:1E0:49:33:21:12:37 0/0:0:0:0:0:36:0%:66:1E0:45:36:25:11:39 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:28 0/0:0:0:0:0:40:0%:74:1E0:50:40:20:20:46 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:44 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:52 0/0:0:0:0:0:49:0%:93:1E0:48:49:34:15:54 0/0:38:1:0:1:69:1.45%:99:5E-1:47:68:45:23:80 0/0:0:0:0:0:41:0%:78:1E0:48:41:21:20:46 0/0:0:0:0:0:54:0%:99:1E0:44:54:30:24:57 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:53 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:34 0/0:60:1:1:0:34:2.94%:51:5E-1:45:33:18:15:36 0/0:0:0:0:0:51:0%:97:1E0:46:51:27:24:55 0/0:0:0:0:0:43:0%:82:1E0:46:43:28:15:48 0/0:0:0:0:0:36:0%:66:1E0:46:36:23:13:40 0/0:0:0:0:0:51:0%:97:1E0:48:51:34:17:62 0/0:0:0:0:0:57:0%:99:1E0:42:57:33:24:62 0/0:0:0:0:0:44:0%:81:1E0:47:44:29:15:49 0/0:0:0:0:0:28:0%:51:1E0:48:28:18:10:32 0/0:39:1:0:1:49:2.04%:80:5E-1:44:48:25:23:55 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:39 0/0:0:0:0:0:39:0%:74:1E0:44:39:25:14:45 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:56 0/0:0:0:0:0:47:0%:89:1E0:40:47:29:18:48 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:40 0/0:0:0:0:0:54:0%:99:1E0:46:54:24:30:58 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:46 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:46 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:37 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:49 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:47 0/0:0:0:0:0:91:0%:99:1E0:48:91:49:42:103 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:41 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:46 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:29 0/0:37:1:1:0:24:4.17%:34:5E-1:41:23:12:11:25 0/0:0:0:0:0:28:0%:51:1E0:52:28:17:11:33 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:37 0/0:0:0:0:0:30:0%:55:1E0:52:30:13:17:32 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:38 0/0:0:0:0:0:49:0%:93:1E0:41:49:21:28:53 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:24 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:50 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:47 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:47 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:48 0/0:0:0:0:0:50:0%:92:1E0:46:50:29:21:54 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:54 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:43 0/0:0:0:0:0:40:0%:74:1E0:48:40:21:19:45 0/0:0:0:0:0:28:0%:51:1E0:49:28:16:12:34 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:35:0%:67:1E0:49:35:20:15:39 0/0:0:0:0:0:58:0%:99:1E0:44:58:26:32:66 0/0:0:0:0:0:39:0%:74:1E0:42:39:27:12:47 0/0:0:0:0:0:48:0%:89:1E0:46:47:26:21:53 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:31 0/1:42:13:10:3:33:39.39%:45:2.8029E-5:40:20:11:9:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:34 0/0:0:0:0:0:39:0%:74:1E0:47:39:25:14:45 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:38 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:41 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:44 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:44 0/0:0:0:0:0:40:0%:74:1E0:45:40:26:14:42 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:58 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:42 0/0:37:1:1:0:46:2.17%:73:5E-1:44:45:20:25:50 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:39 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:23 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:39 0/0:38:1:0:1:31:3.23%:48:5E-1:45:30:13:17:33 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:43 0/0:0:0:0:0:53:0%:99:1E0:40:53:37:16:57 0/0:38:1:1:0:32:3.23%:48:5E-1:38:30:21:9:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:47 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:70:0%:99:1E0:45:70:41:29:76 0/0:0:0:0:0:60:0%:99:1E0:45:60:33:27:68 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:25 0/0:32:1:0:1:38:2.63%:58:5E-1:40:37:19:18:38 0/0:0:0:0:0:57:0%:99:1E0:42:57:35:22:66 0/0:0:0:0:0:53:0%:99:1E0:43:53:24:29:63 0/0:0:0:0:0:54:0%:99:1E0:41:54:29:25:62 0/0:0:0:0:0:46:0%:85:1E0:40:46:27:19:49 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:63 0/0:0:0:0:0:41:0%:78:1E0:42:41:27:14:47 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:51 0/0:0:0:0:0:46:0%:85:1E0:39:46:26:20:49 0/0:0:0:0:0:63:0%:99:1E0:43:63:37:26:76 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:51 0/0:0:0:0:0:54:0%:99:1E0:38:54:30:24:58 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:55 0/0:37:1:1:0:37:2.7%:59:5E-1:44:36:19:17:40 0/0:0:0:0:0:55:0%:99:1E0:40:53:32:21:58 0/0:0:0:0:0:47:0%:89:1E0:45:47:30:17:53 0/0:0:0:0:0:58:0%:99:1E0:47:58:31:27:66 0/0:0:0:0:0:56:0%:99:1E0:45:56:30:26:62 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:35 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:49 0/0:0:0:0:0:51:0%:97:1E0:47:51:34:17:62 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:52 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:48 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:47 0/0:0:0:0:0:54:0%:99:1E0:43:54:31:23:58 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:44 MTB_anc 3691005 . A G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|intergenic_region|MODIFIER|lpdA_Rv3303c-Rv3304_Rv3304|gene3380-gene3381|intergenic_region|gene3380-gene3381|||n.3691005A>G||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:61:0%:99:1E0:47:61:29:32:72 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:30 0/0:0:0:0:0:66:0%:99:1E0:47:66:36:30:71 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:35 0/0:0:0:0:0:31:0%:59:1E0:48:31:27:4:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:22:13:37 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:31 0/0:0:0:0:0:23:0%:44:1E0:51:23:16:7:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:22:8:34 0/0:0:0:0:0:31:0%:59:1E0:52:31:23:8:35 0/0:0:0:0:0:48:0%:89:1E0:47:48:31:17:56 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:29 0/0:0:0:0:0:54:0%:99:1E0:44:54:29:25:60 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:41:0%:78:1E0:50:41:24:17:51 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:31 0/0:0:0:0:0:26:0%:48:1E0:44:25:15:10:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:24:13:45 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:41 0/0:0:0:0:0:51:0%:97:1E0:46:51:37:14:56 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:33 0/0:0:0:0:0:45:0%:85:1E0:45:45:29:16:50 0/0:0:0:0:0:44:0%:81:1E0:47:44:27:17:47 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:45 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:49 0/0:0:0:0:0:54:0%:99:1E0:45:54:24:30:57 0/0:0:0:0:0:43:0%:82:1E0:48:43:27:16:52 0/0:0:0:0:0:33:0%:63:1E0:48:33:21:12:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:26:11:39 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:28 0/0:0:0:0:0:41:0%:78:1E0:50:41:21:20:46 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:44 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:50 0/0:0:0:0:0:49:0%:93:1E0:48:49:34:15:54 0/0:0:0:0:0:70:0%:99:1E0:47:70:45:25:80 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:46 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:58 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:53 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:34 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:36 0/0:0:0:0:0:50:0%:92:1E0:45:50:25:25:55 0/0:0:0:0:0:45:0%:85:1E0:45:45:29:16:50 0/0:0:0:0:0:36:0%:66:1E0:45:36:24:12:41 0/0:0:0:0:0:53:0%:99:1E0:48:53:35:18:61 0/0:0:0:0:0:56:0%:99:1E0:43:56:33:23:59 0/0:0:0:0:0:44:0%:81:1E0:48:44:29:15:48 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:31 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:55 0/0:0:0:0:0:19:0%:37:1E0:42:19:13:6:19 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:24:15:45 0/0:0:0:0:0:50:0%:92:1E0:43:50:26:24:55 0/0:0:0:0:0:49:0%:93:1E0:39:49:29:20:50 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:42 0/0:0:0:0:0:53:0%:99:1E0:45:53:23:30:57 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:45 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:46 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:37 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:50 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:47 0/0:0:0:0:0:90:0%:99:1E0:48:90:48:42:103 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:41 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:44 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:28:0%:51:1E0:53:28:17:11:34 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:38 0/0:0:0:0:0:30:0%:55:1E0:52:30:13:17:32 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:39 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:51 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:26 0/0:0:0:0:0:47:0%:89:1E0:40:47:28:19:49 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:46 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:48 0/0:0:0:0:0:49:0%:93:1E0:48:49:29:20:54 0/0:0:0:0:0:51:0%:97:1E0:45:51:26:25:54 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:36 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:42 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:44 0/0:0:0:0:0:26:0%:47:1E0:51:26:14:12:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:27 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:28 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:34 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:38 0/0:0:0:0:0:54:0%:99:1E0:44:54:24:30:64 0/0:0:0:0:0:41:0%:78:1E0:41:41:27:14:46 0/0:0:0:0:0:48:0%:89:1E0:45:47:26:21:53 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:32 0/1:43:13:10:3:37:35.14%:44:3.404E-5:39:24:14:10:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:33 0/0:0:0:0:0:36:0%:66:1E0:49:36:23:13:43 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:39 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:42 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:44 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:44 0/0:0:0:0:0:39:0%:74:1E0:45:39:26:13:41 0/0:0:0:0:0:52:0%:96:1E0:45:52:26:26:57 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:42 0/0:33:1:1:0:46:2.17%:73:5E-1:43:45:20:25:49 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:39 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:23 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:33 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:44 0/0:0:0:0:0:49:0%:93:1E0:41:49:33:16:56 0/0:35:2:2:0:32:6.45%:40:2.459E-1:38:29:22:7:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:47 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:26 0/0:0:0:0:0:68:0%:99:1E0:44:68:40:28:76 0/0:0:0:0:0:62:0%:99:1E0:44:62:35:27:68 0/0:0:0:0:0:24:0%:44:1E0:39:24:17:7:25 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:38 0/0:0:0:0:0:59:0%:99:1E0:41:59:36:23:65 0/0:0:0:0:0:52:0%:96:1E0:44:52:25:27:63 0/0:0:0:0:0:56:0%:99:1E0:40:56:30:26:62 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:49 0/0:0:0:0:0:55:0%:99:1E0:41:55:32:23:64 0/0:0:0:0:0:41:0%:78:1E0:42:41:28:13:46 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:51 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:49 0/0:0:0:0:0:64:0%:99:1E0:44:64:36:28:75 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:51 0/0:0:0:0:0:55:0%:99:1E0:39:55:31:24:57 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:53 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:40 0/0:0:0:0:0:52:0%:92:1E0:40:50:33:17:57 0/0:0:0:0:0:49:0%:93:1E0:45:49:30:19:53 0/0:0:0:0:0:61:0%:99:1E0:47:61:33:28:67 0/0:0:0:0:0:56:0%:99:1E0:45:56:30:26:62 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:36 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:49 0/0:0:0:0:0:53:0%:99:1E0:47:53:36:17:62 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:51 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:28 0/0:0:0:0:0:45:0%:85:1E0:44:45:27:18:50 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:46 0/0:0:0:0:0:54:0%:99:1E0:43:54:31:23:58 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:44 MTB_anc 3691017 . G GACGATGCACGCCGCGCAGCGGCGTGAGGAGGAGCCGAGCAGTCAAGCACAGCTCGGCG . PASS AC=1;AF=3.333e-03;AN=300;ANN=GACGATGCACGCCGCGCAGCGGCGTGAGGAGGAGCCGAGCAGTCAAGCACAGCTCGGCG|intergenic_region|MODIFIER|lpdA_Rv3303c-Rv3304_Rv3304|gene3380-gene3381|intergenic_region|gene3380-gene3381|||n.3691017_3691018insACGATGCACGCCGCGCAGCGGCGTGAGGAGGAGCCGAGCAGTCAAGCACAGCTCGGCG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:62:0%:99:1E0:47:62:29:33:74 0/0:0:0:0:0:27:0%:52:1E0:52:27:12:15:28 0/0:0:0:0:0:64:0%:99:1E0:46:64:35:29:69 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:25:4:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:32 0/0:0:0:0:0:33:0%:63:1E0:47:33:21:12:35 0/0:0:0:0:0:27:0%:52:1E0:50:27:15:12:32 0/0:0:0:0:0:26:0%:47:1E0:48:26:16:10:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:19:6:29 0/0:0:0:0:0:30:0%:55:1E0:51:30:22:8:34 0/0:39:1:1:0:46:2.17%:73:5E-1:46:45:28:17:55 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:30 0/0:38:1:0:1:53:1.89%:88:5E-1:44:52:29:23:59 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:40:0%:74:1E0:48:40:22:18:47 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:33 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:44 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:38 0/0:0:0:0:0:55:0%:99:1E0:43:55:39:16:59 0/0:0:0:0:0:34:0%:62:1E0:49:34:17:17:34 0/0:0:0:0:0:39:0%:74:1E0:46:39:27:12:46 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:48 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:45 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:43:0%:82:1E0:46:43:20:23:48 0/0:0:0:0:0:49:0%:93:1E0:46:49:23:26:54 0/0:0:0:0:0:47:0%:89:1E0:45:47:29:18:53 0/0:0:0:0:0:33:0%:63:1E0:49:33:21:12:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:25:13:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:37:0%:70:1E0:49:37:19:18:42 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:42 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:49 0/0:0:0:0:0:51:0%:97:1E0:48:51:34:17:57 0/0:0:0:0:0:63:0%:99:1E0:47:63:40:23:73 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:47 0/0:0:0:0:0:54:0%:99:1E0:43:54:31:23:57 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:52 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:35 0/0:0:0:0:0:48:0%:89:1E0:44:48:25:23:53 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:52 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:39 0/0:0:0:0:0:53:0%:99:1E0:47:53:31:22:61 0/0:0:0:0:0:58:0%:99:1E0:42:58:33:25:61 0/0:0:0:0:0:46:0%:85:1E0:47:46:30:16:50 0/0:0:0:0:0:30:0%:55:1E0:45:30:20:10:32 0/0:0:0:0:0:52:0%:96:1E0:42:52:29:23:56 0/0:0:0:0:0:19:0%:37:1E0:42:19:13:6:19 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:37 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:48 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:53 0/0:0:0:0:0:53:0%:99:1E0:40:53:30:23:53 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:40 0/0:0:0:0:0:53:0%:99:1E0:46:53:23:30:59 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:44 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:49 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:39 0/0:0:0:0:0:42:0%:77:1E0:46:42:24:18:48 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:45 0/0:0:0:0:0:90:0%:99:1E0:48:90:49:41:105 0/0:0:0:0:0:35:0%:67:1E0:45:35:23:12:40 0/0:35:1:1:0:43:2.33%:70:5E-1:41:42:22:20:45 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:31 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:29:0%:55:1E0:52:29:17:12:35 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:39 0/0:0:0:0:0:28:0%:51:1E0:53:28:13:15:31 0/0:0:0:0:0:40:0%:74:1E0:47:40:17:23:44 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:46 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:47 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:42:0%:77:1E0:44:42:18:24:47 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:49 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:48 0/0:0:0:0:0:52:0%:96:1E0:47:52:29:23:58 0/0:0:0:0:0:51:0%:97:1E0:45:51:23:28:55 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:49 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:45 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:38 0/0:0:0:0:0:36:0%:66:1E0:49:36:21:15:38 0/0:0:0:0:0:55:0%:99:1E0:44:55:27:28:65 0/0:0:0:0:0:44:0%:81:1E0:40:44:27:17:50 0/0:0:0:0:0:50:0%:92:1E0:44:50:28:22:55 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:35:0%:67:1E0:47:35:23:12:42 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:37 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:41 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:45 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:40 0/0:0:0:0:0:39:0%:74:1E0:44:39:27:12:41 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:55 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:46 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:49 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:38 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:33 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:45 0/0:0:0:0:0:50:0%:92:1E0:40:50:34:16:55 0/1:29:8:4:4:42:18.18%:25:2.7074E-3:39:34:25:9:45 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:49 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:0:0:0:0:66:0%:99:1E0:43:66:39:27:71 0/0:0:0:0:0:58:0%:99:1E0:44:58:32:26:65 0/0:0:0:0:0:23:0%:44:1E0:41:23:18:5:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:36 0/0:0:0:0:0:57:0%:99:1E0:40:57:36:21:64 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:61 0/0:0:0:0:0:60:0%:99:1E0:39:60:31:29:64 0/0:0:0:0:0:45:0%:85:1E0:39:45:28:17:50 0/0:0:0:0:0:63:0%:99:1E0:40:63:35:28:68 0/0:0:0:0:0:40:0%:74:1E0:41:40:28:12:43 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:49 0/0:0:0:0:0:45:0%:85:1E0:40:45:27:18:48 0/0:0:0:0:0:64:0%:99:1E0:44:64:37:27:76 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:52 0/0:0:0:0:0:55:0%:99:1E0:39:55:33:22:57 0/0:0:0:0:0:44:0%:81:1E0:40:44:24:20:52 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:38 0/0:0:0:0:0:53:0%:99:1E0:41:53:32:21:56 0/0:0:0:0:0:45:0%:85:1E0:43:45:27:18:50 0/0:0:0:0:0:59:0%:99:1E0:47:59:33:26:66 0/0:0:0:0:0:50:0%:92:1E0:45:50:30:20:58 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:47 0/0:0:0:0:0:54:0%:99:1E0:46:54:38:16:63 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:50 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:27:18:50 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:47 0/0:0:0:0:0:55:0%:99:1E0:43:55:31:24:58 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:46 MTB_anc 3693681 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|amiB1_Rv3306c|gene3383|transcript|Transcript_gene3383|Coding|1/1|c.309G>T|p.Ala103Ala|309/1185|309/1185|103/394||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3693681C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3693681C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:51:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:13:13:27:96.3%:99:1.4382E-14:32:1:1:0:28 1/1:50:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:51:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:52:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:82:42:40:82:100%:99:6.8742E-49:0:0:0:0:82 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:59:37:22:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:41:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:51 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 3693689 . C T . PASS AC=299;AF=0.997;AN=300;ANN=T|missense_variant|MODERATE|amiB1_Rv3306c|gene3383|transcript|Transcript_gene3383|Coding|1/1|c.301G>A|p.Ala101Thr|301/1185|301/1185|101/394||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3693689C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3693689C>T||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:51:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:27:14:13:28:96.43%:99:3.7915E-15:36:1:1:0:28 1/1:49:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:48:31:17:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:47:26:21:48:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:81:42:39:81:100%:99:2.7329E-48:0:0:0:0:81 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:53:25:18:7:26:96.15%:99:5.4444E-14:37:1:0:1:26 1/1:49:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 0/1:41:24:14:10:27:88.89%:99:2.0853E-12:44:3:2:1:27 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:59:37:22:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:40:26:17:9:27:96.3%:99:1.4382E-14:38:1:1:0:27 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:49:24:25:49:100%:99:3.925E-29:0:0:0:0:54 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:38:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:49:30:19:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:33:19:14:34:97.06%:99:1.2301E-18:60:1:0:1:35 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 MTB_anc 3696181 . G A . PASS AC=298;AF=1.00;AN=298;ANN=A|missense_variant|MODERATE|pmmB_Rv3308|gene3385|transcript|Transcript_gene3385|Coding|1/1|c.1318G>A|p.Gly440Ser|1318/1605|1318/1605|440/534||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3696181G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3696181G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:18:12:6:19:94.74%:92:5.6585E-10:38:1:1:0:23 1/1:35:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:41:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:37:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:48 1/1:37:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:32:25:7:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:49:37:12:49:100%:99:3.925E-29:0:0:0:0:51 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:42:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:28 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:25:20:5:26:96.15%:99:5.4444E-14:38:1:0:1:28 1/1:36:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:34:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:36:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:36:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:37:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:35:24:18:6:24:100%:99:3.101E-14:0:0:0:0:26 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:34:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:25 1/1:36:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:29:25:4:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:37:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:35:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 3697708 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|sapM_Rv3310|gene3387|transcript|Transcript_gene3387|Coding|1/1|c.511G>A|p.Ala171Thr|511/900|511/900|171/299||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3697708G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3697708G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:51:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:42:17:25:43:97.67%:99:6.6289E-24:38:1:0:1:44 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:63:36:27:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:36:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:48:14:34:48:100%:99:1.554E-28:0:0:0:0:53 1/1:38:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:48:22:26:48:100%:99:1.554E-28:0:0:0:0:51 1/1:39:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:29:13:16:30:96.67%:99:2.6212E-16:44:1:0:1:31 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:60:27:33:60:100%:99:1.035E-35:0:0:0:0:61 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 3698588 . C T . PASS AC=26;AF=0.087;AN=300;ANN=T|synonymous_variant|LOW|Rv3311_Rv3311|gene3388|transcript|Transcript_gene3388|Coding|1/1|c.468C>T|p.Arg156Arg|468/1263|468/1263|156/420||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3698588C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3698588C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3698588C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:45:47:18:29:47 0/0:0:0:0:0:22:0%:40:1E0:53:22:10:12:22 0/0:0:0:0:0:48:0%:89:1E0:46:48:24:24:48 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:24 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:13:6:19 0/0:0:0:0:0:25:0%:48:1E0:51:25:10:15:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:30 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:35 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:27 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:48 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:38:19:19:40:95%:99:8.0088E-21:38:2:1:1:40 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:6:15:21 0/0:0:0:0:0:19:0%:37:1E0:49:19:7:12:19 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:58:0%:99:1E0:42:58:32:26:58 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:51:23:13:10:23 0/0:0:0:0:0:21:0%:40:1E0:50:21:14:7:21 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 1/1:42:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:39 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:30 0/0:0:0:0:0:59:0%:99:1E0:48:59:37:22:61 0/0:0:0:0:0:47:0%:89:1E0:48:47:22:25:47 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:41 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:27 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 0/0:0:0:0:0:41:0%:78:1E0:48:41:24:17:41 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:17 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:17:0%:33:1E0:39:17:10:7:18 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:17 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:41 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:45:0%:85:1E0:48:45:25:20:46 0/0:0:0:0:0:84:0%:99:1E0:48:84:42:42:86 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:19:0%:37:1E0:48:19:13:6:19 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:43:0%:82:1E0:48:43:20:23:43 0/0:0:0:0:0:45:0%:85:1E0:50:45:27:18:45 0/0:0:0:0:0:22:0%:40:1E0:51:22:11:11:22 0/0:0:0:0:0:32:0%:59:1E0:49:32:11:21:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:34 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:22:14:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:39 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:25 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:39:0%:74:1E0:42:39:25:14:40 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:50:33:19:14:33 0/0:0:0:0:0:25:0%:48:1E0:51:25:14:11:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:40 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:41 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:47:37:14:23:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:14:0%:25:1E0:46:14:7:7:14 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:17:0%:33:1E0:48:17:10:7:17 0/0:0:0:0:0:44:0%:81:1E0:43:44:26:18:44 0/0:0:0:0:0:43:0%:82:1E0:44:43:27:16:44 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:20 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:46 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:49 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:59:0%:99:1E0:40:59:26:33:59 0/0:0:0:0:0:53:0%:99:1E0:42:53:26:27:54 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:30 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:47 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 0/0:0:0:0:0:57:0%:99:1E0:42:57:25:32:58 0/0:0:0:0:0:44:0%:81:1E0:39:44:32:12:45 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:51 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:41 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:40 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:32:0%:59:1E0:41:32:23:9:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:40 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:47 0/0:0:0:0:0:64:0%:99:1E0:39:64:32:32:66 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:49 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:21:9:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:43:0%:82:1E0:40:43:23:20:45 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:52 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 MTB_anc 3702361 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|deoA_Rv3314c|gene3393|transcript|Transcript_gene3393|Coding|1/1|c.1107G>T|p.Ala369Ala|1107/1284|1107/1284|369/427||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3702361C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3702361C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:18:11:7:19:94.74%:92:5.6585E-10:33:1:1:0:19 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:39:20:19:40:97.5%:99:3.8137E-22:38:1:0:1:40 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:63:32:31:63:100%:99:1.657E-37:0:0:0:0:64 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:29:17:12:30:96.67%:99:2.6212E-16:38:1:1:0:30 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:36:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:36:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:46 1/1:37:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:44:35:9:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:37:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 3707639 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|sdhB_Rv3319-vapC44_Rv3320c|gene3398-gene3399|intergenic_region|gene3398-gene3399|||n.3707639G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:49:24:25:50:98%:99:5.0549E-28:39:1:0:1:52 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:20:7:13:21:95.24%:99:4.0873E-11:39:1:1:0:22 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:49:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:79:36:43:79:100%:99:4.3185E-47:0:0:0:0:82 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:51:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:53:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:60:28:32:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:22:15:7:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:52 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:40:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:50:21:29:51:98.04%:99:1.3013E-28:37:1:0:1:52 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 MTB_anc 3730466 . A G . PASS AC=289;AF=0.997;AN=290;ANN=G|missense_variant|MODERATE|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.6470T>C|p.Ile2157Thr|6470/7572|6470/7572|2157/2523||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3730466A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3730466A>G||||||;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:45:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 0/1:37:8:4:4:9:88.89%:36:2.0568E-4:60:1:1:0:9 1/1:45:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:29:26:3:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:16:9:7:17:94.12%:81:7.7134E-9:33:1:1:0:17 1/1:36:13:9:4:14:92.86%:64:3.7391E-7:60:1:1:0:14 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:15:12:3:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:18:11:7:19:94.74%:92:5.6585E-10:37:1:1:0:20 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:15:7:8:16:93.75%:75:2.8282E-8:60:1:0:1:16 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:26:22:4:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:24:23:1:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:27:17:10:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:22:15:7:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 MTB_anc 3730642 . G A . PASS AC=210;AF=0.991;AN=212;ANN=A|synonymous_variant|LOW|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.6294C>T|p.Asn2098Asn|6294/7572|6294/7572|2098/2523||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3730642G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3730642G>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:11 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:35:6:2:4:7:85.71%:26:2.331E-3:39:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:37:8:3:5:9:88.89%:36:2.0568E-4:37:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:2:8:11:90.91%:52:5.4125E-6:0:0:0:0:11 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:11:4:7:12:91.67%:53:4.8074E-6:36:1:1:0:12 MTB_anc 3730978 . G A . PASS AC=221;AF=0.995;AN=222;ANN=A|synonymous_variant|LOW|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.5958C>T|p.Gly1986Gly|5958/7572|5958/7572|1986/2523||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3730978G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3730978G>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 0/1:40:6:1:5:7:85.71%:26:2.331E-3:38:1:0:1:7 1/1:51:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:46:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:42:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:43:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:46:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:50:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:49:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:45:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:53:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:46:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:11:5:6:12:91.67%:53:4.8074E-6:60:1:0:1:12 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:50:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:50:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:43:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:42:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:8:6:2:8:100%:41:7.77E-5:0:0:0:0:11 1/1:40:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:9:4:5:10:90%:42:5.9538E-5:38:1:0:1:11 MTB_anc 3732624 . G A . PASS AC=68;AF=1.00;AN=68;ANN=A|synonymous_variant|LOW|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4312C>T|p.Leu1438Leu|4312/7572|4312/7572|1438/2523||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732624G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732624G>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:9:5:4:10:90%:42:5.9538E-5:39:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:41:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3732656 . G C . PASS AC=76;AF=1.00;AN=76;ANN=C|missense_variant|MODERATE|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4280C>G|p.Ala1427Gly|4280/7572|4280/7572|1427/2523||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732656G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732656G>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:14:6:8:15:93.33%:69:1.0315E-7:39:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:43:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:14:8:6:15:93.33%:69:1.0315E-7:33:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3732658 . C G . PASS AC=72;AF=1.00;AN=72;ANN=G|missense_variant|MODERATE|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4278G>C|p.Leu1426Phe|4278/7572|4278/7572|1426/2523||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732658C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732658C>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:14:6:8:15:93.33%:69:1.0315E-7:38:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:47:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:14:8:6:15:93.33%:69:1.0315E-7:33:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3732660 . A G . PASS AC=72;AF=1.00;AN=72;ANN=G|synonymous_variant|LOW|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4276T>C|p.Leu1426Leu|4276/7572|4276/7572|1426/2523||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732660A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732660A>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:14:6:8:15:93.33%:69:1.0315E-7:39:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:45:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:43:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:46:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:14:8:6:15:93.33%:69:1.0315E-7:35:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3732664 . G A . PASS AC=72;AF=1.00;AN=72;ANN=A|synonymous_variant|LOW|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4272C>T|p.Val1424Val|4272/7572|4272/7572|1424/2523||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732664G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732664G>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:44:14:6:8:15:93.33%:69:1.0315E-7:39:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:45:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:47:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:14:8:6:15:93.33%:69:1.0315E-7:33:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3732666 . C A . PASS AC=72;AF=1.00;AN=72;ANN=A|missense_variant|MODERATE|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4270G>T|p.Val1424Phe|4270/7572|4270/7572|1424/2523||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732666C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732666C>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:44:14:6:8:15:93.33%:69:1.0315E-7:39:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:44:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:40:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:46:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:14:8:6:15:93.33%:69:1.0315E-7:33:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3732667 . A G . PASS AC=74;AF=1.00;AN=74;ANN=G|synonymous_variant|LOW|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4269T>C|p.Asn1423Asn|4269/7572|4269/7572|1423/2523||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732667A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732667A>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:14:6:8:15:93.33%:69:1.0315E-7:39:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:48:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:47:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:14:8:6:15:93.33%:69:1.0315E-7:38:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3732673 . A C . PASS AC=79;AF=0.988;AN=80;ANN=C|missense_variant|MODERATE|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4263T>G|p.Phe1421Leu|4263/7572|4263/7572|1421/2523||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732673A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732673A>C||||||;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:14:6:8:15:93.33%:69:1.0315E-7:38:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:7:3:4:8:87.5%:31:6.993E-4:25:1:0:1:8 1/1:48:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:48:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:43:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:10:9:1:11:90.91%:47:1.7011E-5:60:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:47:9:4:5:10:90%:42:5.9538E-5:38:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:43:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:45:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:43:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:46:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:47:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:42:14:8:6:15:93.33%:69:1.0315E-7:38:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3732674 . A C . PASS AC=78;AF=0.975;AN=80;ANN=C|missense_variant|MODERATE|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4262T>G|p.Phe1421Cys|4262/7572|4262/7572|1421/2523||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732674A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732674A>C||||||;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:44:14:6:8:15:93.33%:69:1.0315E-7:38:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:39:8:3:5:9:88.89%:36:2.0568E-4:32:1:1:0:9 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:49:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:47:9:4:5:10:90%:42:5.9538E-5:39:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:45:8:3:5:9:88.89%:36:2.0568E-4:60:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:14:8:6:15:93.33%:69:1.0315E-7:38:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3732706 . G A . PASS AC=252;AF=1.00;AN=252;ANN=A|synonymous_variant|LOW|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.4230C>T|p.Gly1410Gly|4230/7572|4230/7572|1410/2523||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3732706G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3732706G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:46:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:47:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:42:10:7:3:11:90.91%:47:1.7011E-5:38:1:1:0:11 1/1:43:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:44:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:46:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:44:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:50:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:9:8:1:10:90%:42:5.9538E-5:34:1:1:0:11 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:44:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:46:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:42:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:45:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:25:13:12:26:96.15%:99:5.4444E-14:38:1:1:0:26 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 MTB_anc 3733684 . G A . PASS AC=298;AF=1.00;AN=298;ANN=A|synonymous_variant|LOW|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.3252C>T|p.Pro1084Pro|3252/7572|3252/7572|1084/2523||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3733684G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3733684G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:49:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:55:25:30:56:98.21%:99:1.4593E-31:34:1:1:0:58 1/1:48:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:35:13:22:36:97.22%:99:8.3613E-20:30:1:1:0:37 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:16:13:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:53:18:35:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:62:25:37:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:48:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:45:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:46:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:61:32:29:61:100%:99:2.609E-36:0:0:0:0:64 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 3734121 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.2815A>G|p.Asn939Asp|2815/7572|2815/7572|939/2523||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3734121T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3734121T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:41:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:39:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:25:11:14:26:96.15%:99:5.4444E-14:36:1:1:0:28 1/1:37:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:58 1/1:38:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:54 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 MTB_anc 3734467 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.2469G>T|p.Leu823Phe|2469/7572|2469/7572|823/2523||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3734467C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3734467C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:15:0%:29:1E0:45:15:11:4:15 0/0:0:0:0:0:63:0%:99:1E0:47:63:36:27:63 0/0:49:2:0:2:27:7.41%:34:2.4528E-1:45:25:12:13:28 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:19 0/0:0:0:0:0:13:0%:25:1E0:44:13:7:6:13 0/0:0:0:0:0:34:0%:62:1E0:52:34:18:16:34 0/0:37:1:0:1:24:4.17%:34:5E-1:46:23:13:10:24 0/0:0:0:0:0:25:0%:48:1E0:53:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:36 0/0:0:0:0:0:23:0%:44:1E0:49:23:12:11:23 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:12:0%:21:1E0:46:12:4:8:12 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:19 0/0:0:0:0:0:19:0%:37:1E0:51:19:12:7:19 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:39:0%:74:1E0:47:39:15:24:40 0/0:0:0:0:0:26:0%:47:1E0:48:26:8:18:26 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:40 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:29 0/0:0:0:0:0:21:0%:40:1E0:50:21:11:10:22 0/0:0:0:0:0:17:0%:33:1E0:46:17:12:5:17 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:6:16:22 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:31 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:60:1:0:1:30:3.33%:44:5E-1:47:29:10:19:30 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:45 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:40 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:18 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:16:0%:29:1E0:39:16:6:10:17 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:38:1:0:1:27:3.7%:41:5E-1:48:26:13:13:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:43 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:17 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:33 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:13:0%:25:1E0:46:13:7:6:14 0/0:0:0:0:0:40:0%:74:1E0:43:40:14:26:42 0/0:48:2:1:1:27:7.41%:34:2.4528E-1:43:25:16:9:27 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:17 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:39:0%:74:1E0:47:39:23:16:39 0/0:0:0:0:0:11:0%:22:1E0:45:11:5:6:11 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:20:0%:36:1E0:52:20:10:10:20 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:50:27:16:11:27 0/0:0:0:0:0:17:0%:33:1E0:51:17:9:8:17 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:41 0/0:60:1:1:0:30:3.33%:44:5E-1:49:29:18:11:30 0/0:0:0:0:0:31:0%:59:1E0:51:31:15:16:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:60:1:0:1:20:5%:27:5E-1:42:19:9:10:20 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:15 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:20:0%:36:1E0:49:20:7:13:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:23 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:16:0%:29:1E0:45:16:5:11:17 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:34 0/0:0:0:0:0:35:0%:67:1E0:49:35:15:20:35 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:25 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:46:0%:85:1E0:41:46:19:27:46 0/0:0:0:0:0:13:0%:25:1E0:45:13:11:2:14 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:20 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:18:0%:32:1E0:40:18:6:12:18 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:27 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:54 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:34 1/1:47:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:55:0%:99:1E0:39:55:27:28:58 0/0:0:0:0:0:31:0%:59:1E0:38:31:20:11:32 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:48 0/0:0:0:0:0:41:0%:78:1E0:38:41:21:20:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:32 0/0:0:0:0:0:44:0%:81:1E0:40:44:24:20:45 0/0:0:0:0:0:29:0%:55:1E0:38:29:16:13:31 0/0:37:1:0:1:39:2.56%:62:5E-1:39:38:19:19:43 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:37 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:35 0/0:0:0:0:0:74:0%:99:1E0:39:74:37:37:75 0/0:38:1:0:1:41:2.44%:66:5E-1:43:40:17:23:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:43 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:41 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:47 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:54:0%:99:1E0:44:54:29:25:55 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:35 MTB_anc 3735802 . G C . PASS AC=299;AF=0.997;AN=300;ANN=C|synonymous_variant|LOW|PPE54_Rv3343c|gene3420|transcript|Transcript_gene3420|Coding|1/1|c.1134C>G|p.Thr378Thr|1134/7572|1134/7572|378/2523||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3735802G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3735802G>C||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:14:6:8:15:93.33%:69:1.0315E-7:33:1:0:1:15 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 0/1:42:15:8:7:17:88.24%:71:7.3277E-8:34:2:1:1:17 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:18:6:12:19:94.74%:92:5.6585E-10:60:1:0:1:19 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:9:13:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:42:20:8:12:21:95.24%:99:4.0873E-11:34:1:0:1:21 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:33:22:11:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:26:10:16:27:96.3%:99:1.4382E-14:38:1:0:1:29 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:23:9:14:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:17:12:5:18:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:27:16:11:28:96.43%:99:3.7915E-15:32:1:1:0:28 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:16:6:10:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:16:17:34:97.06%:99:1.2301E-18:39:1:0:1:34 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:67:36:31:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:43:19:24:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:41:19:22:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:44:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 MTB_anc 3737267 . TTGCCGCCGG T . PASS AC=104;AF=0.349;AN=298;ANN=T|disruptive_inframe_deletion|MODERATE|PE_PGRS49_Rv3344c|gene3421|transcript|Transcript_gene3421|Coding|1/1|c.725_733delCCGGCGGCA|p.Thr242_Gly244del|733/1017|725/1017|242/338||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3737268_3737276delTGCCGCCGG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3737268_3737276delTGCCGCCGG||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:18:11:7:21:85.71%:84:3.7603E-9:36:3:0:3:21 1/1:45:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:31:0%:59:1E0:39:31:8:23:31 0/1:34:8:5:3:10:80%:34:3.5723E-4:36:2:1:1:10 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:25 0/0:0:0:0:0:10:0%:17:1E0:35:10:6:4:10 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:10:0%:17:1E0:43:10:4:6:10 1/1:40:14:5:9:15:93.33%:69:1.0315E-7:37:1:0:1:15 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:17 1/1:42:24:10:14:25:96%:99:2.0568E-13:44:1:0:1:26 1/1:34:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:24:12:12:23:92.31%:99:7.6222E-13:35:2:0:2:26 0/0:0:0:0:0:15:0%:29:1E0:41:15:5:10:15 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:15 0/1:38:17:9:8:18:89.47%:86:2.0936E-9:37:1:0:1:18 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:12 0/0:0:0:0:0:11:0%:22:1E0:42:11:5:6:11 0/0:0:0:0:0:15:0%:29:1E0:34:15:7:8:16 1/1:39:29:15:14:31:93.55%:99:1.1344E-15:37:2:0:2:31 1/1:41:15:10:5:16:93.75%:75:2.8282E-8:38:1:0:1:16 0/1:40:22:15:7:25:81.48%:99:1.0343E-10:36:5:2:3:27 1/1:39:24:13:11:25:96%:99:2.0568E-13:38:1:0:1:25 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:19 0/1:44:13:5:8:14:86.67%:60:8.7675E-7:35:2:1:1:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:20 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:28 0/1:36:19:9:10:21:86.36%:89:1.0931E-9:37:3:1:2:22 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:15 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:25 0/1:37:10:5:5:12:83.33%:44:3.3652E-5:31:2:1:1:13 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/1:37:34:20:14:37:89.47%:99:1.6239E-17:48:4:2:2:39 1/1:41:14:5:9:15:93.33%:69:1.0315E-7:72:1:1:0:16 1/1:40:38:20:18:42:90.48%:99:9.7197E-20:35:4:3:1:42 0/0:0:0:0:0:45:0%:85:1E0:39:45:28:17:45 1/1:41:41:20:21:43:93.18%:99:6.1775E-22:35:3:0:3:45 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/1:37:16:11:5:17:88.89%:76:2.0936E-8:35:2:0:2:18 1/1:36:18:10:8:19:94.74%:92:5.6585E-10:32:1:0:1:19 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:24 0/1:38:24:12:12:27:88.89%:99:2.0853E-12:32:3:2:1:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 1/1:40:22:9:13:24:91.67%:99:1.0078E-11:37:2:0:2:24 1/1:38:31:15:16:33:91.18%:99:2.7308E-16:35:3:1:2:34 1/1:41:28:13:15:29:96.55%:99:9.9776E-16:37:1:0:1:29 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:29:0%:55:1E0:36:29:18:11:30 1/1:40:24:6:18:24:96%:99:2.0568E-13:60:1:1:0:25 1/1:37:19:7:12:17:100%:99:2.8292E-11:0:0:0:0:19 0/1:35:18:9:9:20:85.71%:84:3.7603E-9:34:3:1:2:21 1/1:37:30:15:15:33:90.91%:99:9.89E-16:32:3:2:1:33 1/1:40:15:12:3:15:93.75%:75:2.8282E-8:37:1:1:0:16 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:21 1/1:41:31:19:12:33:91.18%:99:2.7308E-16:35:3:1:2:35 1/1:41:28:17:11:27:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 1/1:37:26:10:16:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:19:12:7:18:95%:98:1.5234E-10:37:1:1:0:20 0/0:0:0:0:0:31:0%:59:1E0:38:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:35 0/0:0:0:0:0:12:0%:21:1E0:33:12:6:6:12 0/0:0:0:0:0:33:0%:63:1E0:36:33:19:14:33 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:10:6:4:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:24:12:12:23:96%:99:2.0568E-13:33:1:0:1:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:12:8:20 1/1:41:19:10:9:20:95%:98:1.5234E-10:39:1:0:1:20 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:29 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:17:8:9:18:94.44%:86:2.0936E-9:39:1:1:0:18 1/1:40:24:11:13:25:96%:99:2.0568E-13:31:1:1:0:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:25 0/1:34:14:7:7:15:87.5%:65:2.5454E-7:37:2:0:2:16 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:0:19:0%:37:1E0:35:19:13:6:22 1/1:36:20:11:9:21:95.24%:99:4.0873E-11:37:1:1:0:21 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:19 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:18 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:9:15:25 0/1:38:7:4:3:8:87.5%:31:6.993E-4:37:1:1:0:8 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:17 0/1:42:14:8:6:18:77.78%:60:8.0605E-7:48:4:3:1:18 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:26 0/1:43:16:6:10:17:88.89%:76:2.0936E-8:35:2:0:2:18 1/1:38:30:14:16:31:93.75%:99:3.0612E-16:34:2:0:2:32 0/1:40:16:7:9:19:84.21%:73:4.357E-8:33:3:1:2:19 0/1:42:37:17:20:42:88.1%:99:9.1365E-19:39:5:2:3:42 1/1:40:17:11:6:18:94.44%:86:2.0936E-9:35:1:0:1:18 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:21 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:21 0/0:0:0:0:0:42:0%:77:1E0:34:42:26:16:45 0/0:38:1:1:0:25:4%:38:5E-1:37:24:10:14:27 0/0:0:0:0:0:34:0%:62:1E0:37:34:20:14:34 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:29 0/0:0:0:0:0:27:0%:52:1E0:36:27:16:11:27 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:22 0/0:0:0:0:0:15:0%:29:1E0:34:15:5:10:15 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:27 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:32 0/0:0:0:0:0:30:0%:55:1E0:37:30:17:13:32 0/0:0:0:0:0:42:0%:77:1E0:38:42:24:18:43 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:37 0/0:0:0:0:0:33:0%:63:1E0:37:33:18:15:33 0/0:0:0:0:0:23:0%:44:1E0:35:23:8:15:25 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:34 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:24 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:30 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:17 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:22 0/0:0:0:0:0:15:0%:29:1E0:36:15:11:4:15 0/0:0:0:0:0:39:0%:74:1E0:40:39:15:24:39 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:25 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:16 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:22 0/0:0:0:0:0:15:0%:29:1E0:35:15:5:10:16 0/0:0:0:0:0:28:0%:51:1E0:36:28:11:17:28 0/0:0:0:0:0:16:0%:29:1E0:36:16:10:6:17 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:16 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:23 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:15 0/0:0:0:0:0:17:0%:33:1E0:35:17:7:10:17 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:20 0/0:0:0:0:0:15:0%:29:1E0:39:15:4:11:16 0/0:0:0:0:0:9:0%:18:1E0:36:9:5:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:28 0/1:38:30:12:18:33:88.24%:99:2.5943E-15:34:4:1:3:34 0/1:39:19:7:12:24:79.17%:84:3.6826E-9:44:5:3:2:24 1/1:40:27:14:13:27:96.43%:99:3.7915E-15:32:1:0:1:28 0/0:0:0:0:0:35:0%:67:1E0:37:35:23:12:38 0/0:0:0:0:0:21:0%:40:1E0:40:21:8:13:22 0/0:0:0:0:0:24:0%:44:1E0:35:24:15:9:25 0/0:0:0:0:0:9:0%:18:1E0:43:9:4:5:9 0/0:0:0:0:0:27:0%:52:1E0:40:27:8:19:28 0/0:0:0:0:0:17:0%:33:1E0:36:17:4:13:19 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:11 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:15 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 1/1:38:33:11:22:32:100%:99:1.3852E-19:0:0:0:0:33 0/1:37:21:12:9:23:87.5%:99:9.0704E-11:36:3:0:3:24 MTB_anc 3737327 . GCACCGGCAAAGACGCCGTCGCCGCCCCGGCCGCCGACACCGCCGTTGCCGCCGC G . PASS AC=1;AF=3.378e-03;AN=296;ANN=G|disruptive_inframe_deletion|MODERATE|PE_PGRS49_Rv3344c|gene3421|transcript|Transcript_gene3421|Coding|1/1|c.620_673delGCGGCGGCAACGGCGGTGTCGGCGGCCGGGGCGGCGACGGCGTCTTTGCCGGTG|p.Gly207_Gly224del|673/1017|620/1017|207/338||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3737328_3737381delCACCGGCAAAGACGCCGTCGCCGCCCCGGCCGCCGACACCGCCGTTGCCGCCGC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3737328_3737381delCACCGGCAAAGACGCCGTCGCCGCCCCGGCCGCCGACACCGCCGTTGCCGCCGC||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:22:0%:40:1E0:35:22:16:6:24 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 0/0:0:0:0:0:22:0%:40:1E0:39:22:8:14:24 0/0:0:0:0:0:11:0%:22:1E0:34:11:5:6:11 0/0:38:1:0:1:17:5.88%:24:5E-1:36:16:8:8:19 0/0:0:0:0:0:11:0%:22:1E0:34:11:7:4:11 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:12:0%:21:1E0:37:12:5:7:17 0/0:0:0:0:0:14:0%:25:1E0:39:14:6:8:15 0/0:0:0:0:0:12:0%:21:1E0:39:12:11:1:12 0/0:0:0:0:0:13:0%:25:1E0:37:13:4:9:13 0/0:0:0:0:0:25:0%:48:1E0:34:25:12:13:25 0/0:0:0:0:0:7:0%:14:1E0:35:7:6:1:7 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:24 0/0:0:0:0:0:14:0%:25:1E0:34:14:6:8:17 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:14 0/0:0:0:0:0:15:0%:29:1E0:39:15:6:9:19 0/0:0:0:0:0:10:0%:17:1E0:34:10:5:5:14 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:13 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:13 0/0:0:0:0:0:12:0%:21:1E0:38:12:8:4:12 0/0:0:0:0:0:23:0%:44:1E0:35:23:9:14:27 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:12 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:22 0/0:0:0:0:0:24:0%:44:1E0:34:24:15:9:25 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:13:0%:25:1E0:41:13:8:5:14 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:20 0/0:0:0:0:0:16:0%:29:1E0:40:16:10:6:17 0/0:0:0:0:0:23:0%:44:1E0:35:23:15:8:25 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:21 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:17 0/0:0:0:0:0:22:0%:40:1E0:41:22:7:15:22 0/0:0:0:0:0:10:0%:17:1E0:34:10:6:4:10 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:26 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:33 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:13 0/0:0:0:0:0:41:0%:78:1E0:36:41:24:17:44 0/0:0:0:0:0:36:0%:66:1E0:35:36:16:20:38 0/0:0:0:0:0:37:0%:70:1E0:37:37:17:20:39 0/0:0:0:0:0:19:0%:37:1E0:35:19:12:7:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:10:6:18 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:15 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:27 0/0:0:0:0:0:21:0%:40:1E0:36:21:13:8:24 0/0:0:0:0:0:23:0%:44:1E0:36:23:13:10:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:28 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:24 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:28 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:30 0/0:0:0:0:0:10:0%:17:1E0:38:10:6:4:10 0/0:0:0:0:0:21:0%:40:1E0:39:21:15:6:27 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:19 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:18 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:20 0/0:0:0:0:0:28:0%:51:1E0:36:28:15:13:28 0/0:0:0:0:0:14:0%:25:1E0:42:14:10:4:17 0/0:0:0:0:0:14:0%:25:1E0:35:14:8:6:15 0/0:0:0:0:0:30:0%:55:1E0:37:30:21:9:31 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:24 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:18 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:31 0/0:0:0:0:0:14:0%:25:1E0:34:14:9:5:16 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:30 0/0:0:0:0:0:31:0%:59:1E0:36:31:12:19:33 0/0:0:0:0:0:14:0%:25:1E0:35:14:8:6:15 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:11:0%:22:1E0:37:11:8:3:11 0/0:0:0:0:0:18:0%:33:1E0:41:17:7:10:21 0/0:0:0:0:0:16:0%:29:1E0:39:16:11:5:17 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:19 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:19 0/0:0:0:0:0:23:0%:44:1E0:35:23:13:10:25 0/0:0:0:0:0:18:0%:32:1E0:39:18:12:6:19 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:18 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:18 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:19 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:13 0/0:0:0:0:0:16:0%:29:1E0:34:16:8:8:17 0/0:0:0:0:0:22:0%:40:1E0:35:22:13:9:27 0/0:0:0:0:0:17:0%:33:1E0:34:17:11:6:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:18 0/0:0:0:0:0:21:0%:40:1E0:35:21:11:10:22 0/0:0:0:0:0:18:0%:32:1E0:38:18:6:12:19 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:9 0/0:0:0:0:0:14:0%:25:1E0:42:14:6:8:16 0/0:0:0:0:0:10:0%:17:1E0:39:10:5:5:11 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:24 0/0:0:0:0:0:12:0%:21:1E0:39:12:3:9:14 0/0:0:0:0:0:26:0%:47:1E0:35:26:14:12:28 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:17 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:24 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:20 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:21 0/0:0:0:0:0:29:0%:55:1E0:34:29:17:12:36 0/0:0:0:0:0:30:0%:55:1E0:36:30:17:13:33 0/0:0:0:0:0:29:0%:55:1E0:37:29:13:16:30 0/0:60:1:1:0:27:3.7%:41:5E-1:40:26:15:11:32 0/0:0:0:0:0:17:0%:33:1E0:35:17:12:5:22 0/1:32:12:8:4:17:66.67%:48:1.4831E-5:33:6:4:2:18 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:11 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:25 0/0:0:0:0:0:19:0%:37:1E0:38:19:11:8:21 0/0:0:0:0:0:32:0%:59:1E0:36:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:35:32:19:13:34 0/0:0:0:0:0:44:0%:81:1E0:36:44:24:20:50 0/0:0:0:0:0:27:0%:52:1E0:37:27:16:11:28 0/0:0:0:0:0:35:0%:67:1E0:34:35:19:16:37 0/0:0:0:0:0:18:0%:32:1E0:34:18:6:12:20 0/0:0:0:0:0:32:0%:59:1E0:38:32:12:20:34 0/0:0:0:0:0:15:0%:29:1E0:35:15:10:5:18 0/0:0:0:0:0:28:0%:51:1E0:35:28:15:13:30 0/0:0:0:0:0:14:0%:25:1E0:33:14:6:8:18 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:28 0/0:0:0:0:0:15:0%:29:1E0:35:15:7:8:17 0/0:0:0:0:0:14:0%:25:1E0:36:14:10:4:15 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:32 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:23 0/0:0:0:0:0:10:0%:17:1E0:33:10:7:3:11 0/0:0:0:0:0:24:0%:44:1E0:33:24:9:15:27 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:14 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:13 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:15 0/0:0:0:0:0:10:0%:17:1E0:34:10:5:5:13 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:23 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:20 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:16 0/0:0:0:0:0:11:0%:22:1E0:34:11:7:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:25 0/0:0:0:0:0:26:0%:47:1E0:34:26:12:14:27 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:20 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:27 0/0:0:0:0:0:29:0%:55:1E0:35:29:20:9:35 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:19 0/0:0:0:0:0:16:0%:29:1E0:36:16:12:4:18 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:10 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:28 0/0:0:0:0:0:17:0%:33:1E0:34:17:4:13:19 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 0/0:0:0:0:0:19:0%:37:1E0:36:19:11:8:20 0/0:0:0:0:0:26:0%:47:1E0:39:26:11:15:28 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:36 0/0:0:0:0:0:15:0%:29:1E0:37:15:8:7:16 MTB_anc 3737371 . G T . PASS AC=296;AF=1.00;AN=296;ANN=T|missense_variant|MODERATE|PE_PGRS49_Rv3344c|gene3421|transcript|Transcript_gene3421|Coding|1/1|c.630C>A|p.Asn210Lys|630/1017|630/1017|210/338||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3737371G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3737371G>T||||||;HET=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:17:9:8:18:94.44%:93:4.2852E-10:0:0:0:0:19 1/1:42:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:21:13:8:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:35:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:23:10:13:24:95.83%:99:7.7525E-13:38:1:0:1:25 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:16:12:4:17:94.12%:81:7.7134E-9:32:1:1:0:18 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 MTB_anc 3737466 . AGCCGCTGCCGCCGGCGCCGCCGGCGCCGCCGCCACC A . PASS AC=118;AF=0.484;AN=244;ANN=A|inframe_deletion|MODERATE|PE_PGRS49_Rv3344c|gene3421|transcript|Transcript_gene3421|Coding|1/1|c.499_534delGGTGGCGGCGGCGCCGGCGGCGCCGGCGGCAGCGGC|p.Gly167_Gly178del|534/1017|499/1017|167/338||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3737467_3737502delGCCGCTGCCGCCGGCGCCGCCGGCGCCGCCGCCACC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3737467_3737502delGCCGCTGCCGCCGGCGCCGCCGGCGCCGCCGCCACC||||||;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:17:15:2:18:89.47%:82:5.9414E-9:29:2:1:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:40:12:10:2:20:60%:46:2.2548E-5:41:8:2:6:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:10:9:1:14:71.43%:41:7.6278E-5:42:4:1:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:38:11:6:5:14:68.75%:44:3.3854E-5:36:5:3:2:16 0/1:37:7:5:2:7:87.5%:31:6.993E-4:38:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:41:12:11:1:18:66.67%:48:1.4831E-5:32:6:2:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:11:8:3:17:64.71%:43:4.3258E-5:40:6:3:3:17 0/1:41:7:5:2:9:77.78%:29:1.1312E-3:36:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:7:3:4:10:63.64%:27:1.935E-3:47:4:4:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:10:7:3:13:71.43%:41:7.6278E-5:35:4:0:4:14 0/1:38:9:7:2:14:64.29%:35:2.8986E-4:35:5:3:2:14 0/1:34:14:8:6:17:73.68%:59:1.2025E-6:33:5:1:4:20 0/1:39:6:5:1:12:50%:21:6.865E-3:49:6:5:1:12 0/1:40:10:9:1:17:58.82%:38:1.4831E-4:36:7:3:4:17 0/1:40:12:8:4:18:66.67%:48:1.4831E-5:36:6:2:4:18 0/1:36:11:9:2:16:64.71%:43:4.3258E-5:37:6:3:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:7:0:7:10:63.64%:27:1.935E-3:54:4:1:3:11 0/0:35:5:4:1:12:41.67%:3:1.8634E-2:40:7:1:6:12 0/1:35:9:5:4:17:50%:32:5.1645E-4:40:9:6:3:18 0/1:37:10:7:3:13:76.92%:42:5.3843E-5:45:3:1:2:13 0/1:40:8:6:2:16:50%:29:1.2236E-3:38:8:3:5:16 0/1:39:10:6:4:12:83.33%:44:3.3652E-5:34:2:0:2:12 0/1:39:7:7:0:11:63.64%:27:1.935E-3:36:4:2:2:11 0/1:38:9:5:4:14:64.29%:35:2.8986E-4:45:5:3:2:15 0/1:35:19:11:8:24:76%:82:5.8245E-9:35:6:1:5:27 0/1:48:10:5:5:16:62.5%:39:1.2413E-4:36:6:2:4:16 0/1:39:21:17:4:28:72.41%:88:1.2841E-9:40:8:4:4:29 0/1:33:19:13:6:27:65.52%:76:2.1144E-8:36:10:3:7:30 0/1:38:14:9:5:24:56%:53:4.7528E-6:41:11:6:5:26 0/1:34:14:13:1:21:63.64%:55:2.7817E-6:36:8:4:4:23 0/1:38:14:7:7:19:73.68%:59:1.2025E-6:42:5:2:3:19 0/1:36:12:7:5:15:75%:50:8.0605E-6:43:4:1:3:16 0/1:40:10:7:3:14:71.43%:41:7.6278E-5:42:4:2:2:14 0/1:34:8:8:0:15:50%:29:1.2236E-3:49:8:1:7:17 0/1:39:11:9:2:17:64.71%:43:4.3258E-5:36:6:2:4:17 0/1:35:7:5:2:12:58.33%:26:2.2883E-3:34:5:4:1:12 0/1:36:7:6:1:14:50%:25:2.8986E-3:35:7:4:3:14 0/1:36:15:9:6:22:65.22%:60:9.5813E-7:35:8:3:5:23 0/1:35:17:10:7:21:77.27%:74:3.8368E-8:39:5:4:1:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:36:14:10:4:24:58.33%:53:4.0663E-6:42:10:4:6:25 0/1:36:7:5:2:10:70%:28:1.548E-3:36:3:0:3:10 0/1:36:9:8:1:13:69.23%:36:2.2883E-4:42:4:1:3:14 0/1:35:10:5:5:17:58.82%:38:1.4831E-4:34:7:5:2:17 0/1:38:10:5:5:16:58.82%:38:1.4831E-4:34:7:5:2:19 0/1:33:11:10:1:16:64.71%:43:4.3258E-5:37:6:5:1:17 0/1:40:8:6:2:11:72.73%:32:5.16E-4:36:3:1:2:12 0/1:39:20:18:2:29:68.97%:82:5.4216E-9:38:9:6:3:29 0/1:37:8:5:3:10:72.73%:32:5.16E-4:36:3:0:3:11 0/1:35:11:9:2:13:78.57%:47:1.6951E-5:36:3:1:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:6:4:2:11:54.55%:22:6.192E-3:35:5:3:2:11 0/0:31:5:2:3:11:41.67%:3:1.8634E-2:39:7:3:4:12 0/1:34:7:5:2:8:77.78%:29:1.1312E-3:35:2:0:2:9 0/1:36:16:10:6:18:84.21%:73:4.357E-8:37:3:2:1:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:43:8:7:1:13:61.54%:30:8.238E-4:35:5:2:3:13 0/1:38:6:5:1:9:66.67%:23:4.5249E-3:37:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:44:8:2:6:13:66.67%:31:6.7304E-4:43:4:1:3:13 0/1:40:11:7:4:12:84.62%:49:1.0096E-5:49:2:0:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:38:10:8:2:14:71.43%:41:7.6278E-5:48:4:1:3:14 0/1:37:13:10:3:20:61.9%:50:7.9741E-6:39:8:3:5:21 0/1:42:9:4:5:15:60%:34:3.4983E-4:42:6:2:4:15 0/1:38:10:7:3:13:76.92%:42:5.3843E-5:37:3:1:2:13 0/1:44:7:3:4:10:70%:28:1.548E-3:34:3:2:1:10 0/1:40:8:5:3:13:61.54%:30:8.238E-4:40:5:3:2:14 0/0:37:3:2:1:10:30%:4:1.0526E-1:36:7:4:3:11 0/1:34:6:5:1:14:42.86%:20:7.971E-3:44:8:4:4:14 0/1:31:10:7:3:16:55.56%:37:1.7215E-4:39:8:3:5:20 0/1:37:9:5:4:12:69.23%:36:2.2883E-4:54:4:3:1:13 0/1:30:10:7:3:15:58.82%:38:1.4831E-4:43:7:2:5:18 0/1:37:8:7:1:11:72.73%:32:5.16E-4:44:3:1:2:12 0/1:36:13:11:2:19:68.42%:53:5.0106E-6:38:6:3:3:19 0/1:41:10:6:4:16:62.5%:39:1.2413E-4:40:6:1:5:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:16:12:4:17:88.89%:76:2.0936E-8:48:2:2:0:18 0/1:40:10:9:1:13:76.92%:42:5.3843E-5:35:3:3:0:13 1/1:39:11:6:5:10:100%:58:1.4176E-6:0:0:0:0:11 0/1:37:9:4:5:11:81.82%:39:1.1057E-4:49:2:1:1:12 0/1:36:12:11:1:23:52.17%:44:3.4748E-5:35:11:5:6:23 0/1:41:9:4:5:13:69.23%:36:2.2883E-4:43:4:0:4:13 0/1:37:9:7:2:17:52.94%:33:4.6348E-4:34:8:3:5:18 0/1:37:9:4:5:12:69.23%:36:2.2883E-4:43:4:3:1:13 0/1:41:7:5:2:13:53.85%:25:2.6087E-3:36:6:3:3:13 0/1:36:10:9:1:17:58.82%:38:1.4831E-4:43:7:5:2:17 0/1:33:7:7:0:13:50%:25:2.8986E-3:30:7:6:1:15 0/1:38:21:15:6:28:75%:90:8.7917E-10:39:7:4:3:28 0/1:41:17:11:6:20:85%:78:1.2848E-8:36:3:0:3:21 0/1:31:13:7:6:20:56.52%:49:1.1242E-5:38:10:3:7:23 0/1:34:8:7:1:12:57.14%:30:9.6618E-4:32:6:5:1:14 0/0:37:3:2:1:11:27.27%:7:1.0714E-1:37:8:2:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:41:4:3:1:10:40%:3:4.3344E-2:36:6:2:4:10 0/1:35:7:4:3:8:87.5%:31:6.993E-4:30:1:1:0:9 0/1:37:12:9:3:18:63.16%:47:1.8611E-5:36:7:2:5:19 0/1:34:12:5:7:20:57.14%:45:2.658E-5:39:9:6:3:21 0/1:35:16:11:5:24:64%:63:4.1493E-7:33:9:4:5:25 0/1:40:11:6:5:17:64.71%:43:4.3258E-5:34:6:4:2:18 0/1:37:19:13:6:27:67.86%:77:1.6265E-8:36:9:6:3:30 0/1:35:8:5:3:18:44.44%:28:1.4461E-3:34:10:4:6:19 0/1:39:22:13:9:25:84.62%:99:5.5261E-11:36:4:3:1:26 0/1:33:6:6:0:13:42.86%:20:7.971E-3:35:8:4:4:14 0/1:34:11:9:2:17:61.11%:42:5.2969E-5:35:7:3:4:18 0/1:34:7:7:0:8:77.78%:29:1.1312E-3:37:2:1:1:9 0/1:38:12:12:0:23:50%:44:3.8815E-5:38:12:4:8:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:20:15:5:24:80%:89:1.1273E-9:35:5:2:3:25 0/1:37:13:9:4:16:76.47%:55:2.5647E-6:35:4:2:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:32:7:6:1:8:77.78%:29:1.1312E-3:38:2:1:1:9 0/1:37:7:4:3:11:58.33%:26:2.2883E-3:34:5:1:4:13 0/1:38:7:7:0:12:58.33%:26:2.2883E-3:34:5:0:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:7:5:2:11:63.64%:27:1.935E-3:36:4:0:4:12 0/1:37:11:8:3:13:84.62%:49:1.0096E-5:34:2:1:1:13 0/1:33:8:5:3:12:61.54%:30:8.238E-4:40:5:1:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:46:6:3:3:12:50%:21:6.865E-3:35:6:1:5:12 0/1:33:16:15:1:25:61.54%:62:5.1256E-7:36:10:4:6:26 0/1:35:10:10:0:12:76.92%:42:5.3843E-5:38:3:1:2:14 0/1:36:15:11:4:20:71.43%:62:5.4994E-7:43:6:2:4:22 0/1:37:19:14:5:27:67.86%:77:1.6265E-8:37:9:3:6:28 0/1:37:9:8:1:14:64.29%:35:2.8986E-4:39:5:3:2:14 0/1:39:7:3:4:12:58.33%:26:2.2883E-3:37:5:2:3:12 0/1:37:6:5:1:7:75%:24:3.4965E-3:35:2:0:2:8 0/1:38:14:11:3:22:60.87%:54:3.4067E-6:36:9:4:5:23 0/1:37:11:4:7:16:68.75%:44:3.3854E-5:36:5:1:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:9:5:4:13:64.29%:35:2.8986E-4:37:5:1:4:14 0/1:42:14:9:5:25:56%:53:4.7528E-6:37:11:4:7:25 0/1:37:16:14:2:27:59.26%:62:6.1806E-7:40:11:5:6:27 0/1:30:6:3:3:12:46.15%:21:7.4534E-3:41:7:1:6:13 MTB_anc 3737844 . C T . PASS AC=65;AF=0.223;AN=292;ANN=T|missense_variant|MODERATE|PE_PGRS49_Rv3344c|gene3421|transcript|Transcript_gene3421|Coding|1/1|c.157G>A|p.Gly53Ser|157/1017|157/1017|53/338||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3737844C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3737844C>T||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:27:0%:52:1E0:36:27:6:21:27 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:10 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 0/0:0:0:0:0:11:0%:22:1E0:38:11:1:10:12 0/0:0:0:0:0:29:0%:55:1E0:36:29:7:22:30 0/0:0:0:0:0:7:0%:14:1E0:37:7:1:6:8 0/0:0:0:0:0:13:0%:25:1E0:41:13:4:9:14 1/1:41:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 0/0:0:0:0:0:19:0%:37:1E0:35:19:2:17:19 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:19 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:11 0/0:0:0:0:0:21:0%:40:1E0:36:21:6:15:21 0/0:0:0:0:0:8:0%:14:1E0:44:8:4:4:8 0/0:0:0:0:0:21:0%:40:1E0:35:21:8:13:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:13 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:11 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 0/0:0:0:0:0:11:0%:22:1E0:38:11:2:9:11 0/1:39:8:4:4:9:88.89%:36:2.0568E-4:59:1:1:0:10 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 0/0:0:0:0:0:25:0%:48:1E0:35:25:9:16:26 0/0:0:0:0:0:8:0%:14:1E0:45:8:4:4:9 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:18 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:27 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:13 0/0:0:0:0:0:7:0%:14:1E0:37:7:3:4:7 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:20 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:16 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:21 0/0:0:0:0:0:24:0%:44:1E0:34:24:8:16:24 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:18 0/0:0:0:0:0:11:0%:22:1E0:36:11:1:10:11 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:21 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:18 0/0:0:0:0:0:40:0%:74:1E0:36:40:18:22:40 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:27:0%:52:1E0:36:27:7:20:27 1/1:37:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:21 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:13 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:18 0/0:0:0:0:0:19:0%:37:1E0:34:19:5:14:19 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:26 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:22:0%:40:1E0:38:22:5:17:23 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:18 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:16 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:12 0/0:0:0:0:0:30:0%:55:1E0:36:30:11:19:30 0/0:0:0:0:0:8:0%:14:1E0:36:8:0:8:9 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:12 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:20 0/0:0:0:0:0:23:0%:44:1E0:36:23:7:16:23 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:36 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:12 0/0:0:0:0:0:19:0%:37:1E0:36:19:5:14:21 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:17 0/0:0:0:0:0:17:0%:33:1E0:41:17:5:12:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:4:15:19 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:35 0/0:0:0:0:0:12:0%:21:1E0:42:12:8:4:12 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:16 0/0:0:0:0:0:10:0%:17:1E0:38:10:4:6:10 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:0:0:0:0:14:0%:25:1E0:38:14:2:12:14 0/0:37:1:1:0:16:6.25%:21:5E-1:40:15:4:11:16 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:15 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:15 0/0:0:0:0:0:16:0%:29:1E0:34:16:3:13:17 0/0:0:0:0:0:11:0%:22:1E0:36:11:2:9:11 0/0:0:0:0:0:25:0%:48:1E0:36:25:5:20:25 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:19 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:12 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:19 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:20 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:12 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:12 1/1:36:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:7 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:11:0%:22:1E0:38:11:2:9:11 0/0:0:0:0:0:18:0%:32:1E0:37:18:4:14:18 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:10 0/0:0:0:0:0:19:0%:37:1E0:36:19:8:11:20 0/0:38:1:0:1:21:4.76%:31:5E-1:37:20:6:14:21 0/0:0:0:0:0:28:0%:51:1E0:37:28:4:24:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:22 0/0:0:0:0:0:22:0%:40:1E0:38:22:6:16:22 0/0:0:0:0:0:19:0%:37:1E0:34:19:5:14:19 0/0:0:0:0:0:26:0%:47:1E0:38:26:6:20:28 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:19 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:24 0/0:0:0:0:0:29:0%:55:1E0:34:29:7:22:30 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:21 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:20 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:29 0/0:0:0:0:0:37:0%:70:1E0:37:37:12:25:37 0/0:0:0:0:0:15:0%:29:1E0:36:15:8:7:16 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:28 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:15 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:26 0/0:0:0:0:0:14:0%:25:1E0:33:14:4:10:14 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:18 0/0:0:0:0:0:19:0%:37:1E0:38:19:4:15:20 0/0:0:0:0:0:22:0%:40:1E0:35:22:6:16:22 0/0:0:0:0:0:8:0%:14:1E0:38:8:3:5:8 0/0:0:0:0:0:16:0%:29:1E0:35:16:4:12:16 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:9:0%:18:1E0:34:9:0:9:9 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:13:0%:25:1E0:34:13:1:12:14 0/0:0:0:0:0:10:0%:17:1E0:33:10:1:9:10 0/0:0:0:0:0:20:0%:36:1E0:35:20:3:17:20 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:20 0/0:0:0:0:0:23:0%:44:1E0:35:23:8:15:23 0/0:0:0:0:0:12:0%:21:1E0:34:12:2:10:12 0/0:0:0:0:0:24:0%:44:1E0:35:24:3:21:24 0/0:0:0:0:0:23:0%:44:1E0:38:23:8:15:23 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:15 1/1:38:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:21:0%:40:1E0:37:21:5:16:21 0/0:0:0:0:0:19:0%:37:1E0:36:19:8:11:20 0/0:0:0:0:0:29:0%:55:1E0:36:29:6:23:30 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:18 MTB_anc 3738415 . C G . PASS AC=260;AF=1.00;AN=260;ANN=G|missense_variant|MODERATE|PE_PGRS50_Rv3345c|gene3422|transcript|Transcript_gene3422|Coding|1/1|c.4360G>C|p.Gly1454Arg|4360/4617|4360/4617|1454/1538||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3738415C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3738415C>G||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:33:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:34:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:33:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:33:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 MTB_anc 3738419 . C G . PASS AC=250;AF=1.00;AN=250;ANN=G|synonymous_variant|LOW|PE_PGRS50_Rv3345c|gene3422|transcript|Transcript_gene3422|Coding|1/1|c.4356G>C|p.Gly1452Gly|4356/4617|4356/4617|1452/1538||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3738419C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3738419C>G||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:33:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:11:5:6:12:91.67%:58:1.4176E-6:0:0:0:0:13 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:33:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:12 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:33:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:11 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:32:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:33:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:32:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:33:12:7:5:12:100%:64:3.698E-7:0:0:0:0:15 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:32:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:32:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:33:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:33:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:33:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:33:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:33:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:18:11:7:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 MTB_anc 3744786 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.8399C>T|p.Ala2800Val|8399/9474|8399/9474|2800/3157||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3744786G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3744786G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:13:12:27:92.59%:99:2.0853E-13:38:2:1:1:29 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:49:20:29:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:38:17:21:39:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:46:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:15:24:40:97.5%:99:3.8137E-22:38:1:1:0:43 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:31:15:16:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:36:12:24:37:97.3%:99:2.1762E-20:38:1:1:0:39 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:17:20:38:97.37%:99:5.6582E-21:32:1:0:1:40 1/1:39:29:15:14:30:96.67%:99:2.6212E-16:37:1:0:1:30 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:57:19:38:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:8:16:25:96%:99:2.0568E-13:34:1:0:1:26 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:50:15:35:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:45:28:4:24:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:36:16:20:37:97.3%:99:2.1762E-20:60:1:0:1:38 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:57 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:16:18:35:97.14%:99:3.2089E-19:37:1:0:1:38 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:32:15:17:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:38:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:37:18:19:38:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 3745816 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.7369A>G|p.Asn2457Asp|7369/9474|7369/9474|2457/3157||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3745816T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3745816T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:30:13:17:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:63:32:31:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:51:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:18:6:12:19:94.74%:92:5.6585E-10:60:1:1:0:19 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:50:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:13:18:32:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:61:28:33:61:100%:99:2.609E-36:0:0:0:0:61 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:26:13:13:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:65:31:34:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 3746845 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.6340G>A|p.Val2114Ile|6340/9474|6340/9474|2114/3157||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3746845C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3746845C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:36:20:16:37:97.3%:99:2.1762E-20:35:1:1:0:37 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:51:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:53:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:13:20:34:97.06%:99:1.2301E-18:32:1:1:0:34 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:12:19:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:25:16:9:26:96.15%:99:5.4444E-14:38:1:1:0:29 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:33:19:14:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:20:9:11:21:95.24%:99:4.0873E-11:31:1:0:1:21 1/1:40:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:38:23:15:39:97.44%:99:1.4697E-21:60:1:1:0:43 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:55:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:53:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:53:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:28:12:42:95.24%:99:5.6346E-22:42:2:1:1:44 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:16:7:25:92%:99:2.7767E-12:60:2:1:1:26 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:12:12:25:96%:99:2.0568E-13:37:1:1:0:26 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:40:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:66:29:37:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 3749639 . G A . PASS AC=28;AF=0.093;AN=300;ANN=A|synonymous_variant|LOW|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.3546C>T|p.Ile1182Ile|3546/9474|3546/9474|1182/3157||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3749639G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3749639G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:42 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:29 0/0:0:0:0:0:52:0%:96:1E0:47:52:26:26:52 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:47:0%:89:1E0:53:47:20:27:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:30 0/0:0:0:0:0:39:0%:74:1E0:46:39:25:14:39 0/0:0:0:0:0:30:0%:55:1E0:49:30:19:11:30 0/0:0:0:0:0:41:0%:78:1E0:49:41:16:25:41 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:42 0/0:0:0:0:0:17:0%:33:1E0:56:17:12:5:17 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 1/1:48:22:14:8:23:95.65%:99:2.9149E-12:60:1:0:1:23 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:38:0%:70:1E0:47:38:23:15:38 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:56:0%:99:1E0:44:56:28:28:56 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:25 0/0:0:0:0:0:50:0%:92:1E0:47:50:22:28:50 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:20:0%:36:1E0:49:20:12:8:20 0/0:0:0:0:0:22:0%:40:1E0:50:22:7:15:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:35:0%:67:1E0:50:35:20:15:35 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 1/1:52:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:40 0/0:0:0:0:0:35:0%:67:1E0:45:35:18:17:35 0/0:0:0:0:0:65:0%:99:1E0:48:65:33:32:66 0/0:0:0:0:0:55:0%:99:1E0:45:55:33:22:55 0/0:0:0:0:0:50:0%:92:1E0:46:50:22:28:51 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:39 0/0:0:0:0:0:20:0%:36:1E0:44:20:15:5:21 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:28 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:45:0%:85:1E0:41:45:22:23:46 0/0:0:0:0:0:47:0%:89:1E0:46:47:24:23:47 0/0:60:1:1:0:45:2.22%:73:5E-1:46:44:29:15:46 0/0:0:0:0:0:20:0%:36:1E0:50:20:8:12:20 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:38 0/0:0:0:0:0:41:0%:78:1E0:47:41:20:21:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:46:0%:85:1E0:44:46:25:21:46 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:40:0%:74:1E0:49:40:16:24:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:27:13:40 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:31:0%:59:1E0:47:31:15:16:31 0/0:0:0:0:0:52:0%:96:1E0:47:52:27:25:52 0/0:0:0:0:0:24:0%:44:1E0:43:24:16:8:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:13:0%:25:1E0:53:13:6:7:13 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:42:0%:77:1E0:48:42:25:17:42 0/0:0:0:0:0:36:0%:66:1E0:51:36:14:22:36 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:39:1:1:0:34:2.94%:51:5E-1:49:33:15:18:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:25 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:31:0%:59:1E0:49:31:18:13:31 0/0:0:0:0:0:34:0%:62:1E0:49:34:12:22:34 0/0:0:0:0:0:29:0%:55:1E0:52:29:14:15:29 0/0:0:0:0:0:48:0%:89:1E0:48:48:27:21:48 0/0:0:0:0:0:38:0%:70:1E0:52:38:22:16:38 0/0:0:0:0:0:56:0%:99:1E0:41:56:21:35:57 0/0:0:0:0:0:18:0%:32:1E0:44:18:9:9:18 0/0:0:0:0:0:60:0%:99:1E0:45:60:26:34:60 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:31:0%:59:1E0:43:31:7:24:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:30 0/0:0:0:0:0:18:0%:32:1E0:46:18:7:11:18 0/0:0:0:0:0:35:0%:67:1E0:50:35:15:20:35 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:37:0%:70:1E0:47:37:14:23:37 0/0:33:1:1:0:39:2.56%:62:5E-1:44:38:24:14:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:42:0%:77:1E0:41:42:26:16:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:51:0%:97:1E0:41:51:24:27:52 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:48 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:58:0%:99:1E0:42:58:32:26:58 0/0:0:0:0:0:57:0%:99:1E0:42:57:35:22:57 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:53 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 0/0:0:0:0:0:51:0%:97:1E0:43:51:32:19:51 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:44 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:53 0/0:0:0:0:0:45:0%:85:1E0:45:45:18:27:46 1/1:43:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:44 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:25:10:37 0/0:33:1:1:0:30:3.33%:44:5E-1:44:29:17:12:30 0/0:0:0:0:0:68:0%:99:1E0:39:68:26:42:68 0/0:0:0:0:0:53:0%:99:1E0:42:53:22:31:53 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:46 0/0:0:0:0:0:51:0%:97:1E0:44:51:29:22:51 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:49:0%:93:1E0:45:49:20:29:49 0/0:0:0:0:0:65:0%:99:1E0:44:65:39:26:65 0/0:0:0:0:0:40:0%:74:1E0:43:40:12:28:41 MTB_anc 3750177 . T A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.3008A>T|p.Asp1003Val|3008/9474|3008/9474|1003/3157||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750177T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750177T>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:50:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:51:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:48:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:26:13:13:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:54:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:53:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:69:39:30:69:100%:99:4.233E-41:0:0:0:0:72 1/1:42:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 3750178 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.3007G>T|p.Asp1003Tyr|3007/9474|3007/9474|1003/3157||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750178C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750178C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:50:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:50:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:51:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:50:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:54:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:71:40:31:71:100%:99:2.6835E-42:0:0:0:0:72 1/1:42:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 3750185 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.3000C>G|p.Ser1000Ser|3000/9474|3000/9474|1000/3157||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750185G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750185G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:24:9:15:25:96%:99:2.0568E-13:37:1:0:1:27 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:49:17:6:11:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:48:15:33:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:50:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:16:7:9:17:94.12%:81:7.7134E-9:60:1:1:0:17 1/1:44:38:17:21:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:44:22:15:7:24:95.65%:99:4.7526E-13:0:0:0:0:24 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:35:17:18:36:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:48:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:20:15:36:97.22%:99:8.9137E-21:0:0:0:0:37 1/1:54:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:24:13:11:25:96%:99:3.101E-14:0:0:0:0:25 1/1:51:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:51:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:51:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:28:11:17:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:70:42:28:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:43:35:11:24:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:60:29:31:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 3750205 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2980A>G|p.Asn994Asp|2980/9474|2980/9474|994/3157||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750205T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750205T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:48:27:21:49:97.96%:99:1.9625E-27:39:1:0:1:51 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:13:11:26:92.31%:99:7.6222E-13:46:2:0:2:26 1/1:47:22:10:12:23:95.65%:99:2.9149E-12:39:1:0:1:23 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:48:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:26:11:15:27:96.3%:99:1.4382E-14:38:1:1:0:27 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:12:7:5:13:92.31%:64:3.698E-7:0:0:0:0:13 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:32:16:16:33:96.97%:99:4.7095E-18:37:1:1:0:34 1/1:50:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:47:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:48:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:36:16:20:37:97.3%:99:2.1762E-20:33:1:1:0:38 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:42:15:27:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:31:19:12:32:96.88%:99:1.8007E-17:38:1:0:1:33 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:67:39:28:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:58:28:30:59:98.31%:99:1.6283E-34:0:0:0:0:60 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 3750209 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2976C>T|p.Thr992Thr|2976/9474|2976/9474|992/3157||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750209G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750209G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:26:14:12:27:96.3%:99:1.4382E-14:60:1:0:1:28 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:49:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:52:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:30:19:11:31:96.77%:99:6.8754E-17:38:1:0:1:33 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:65:39:26:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:44:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 3750210 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2975C>A|p.Thr992Asn|2975/9474|2975/9474|992/3157||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750210G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750210G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:52:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:52:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:50:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:51:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:53:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:52:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:64:39:25:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:38:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 3750407 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2778G>C|p.Gly926Gly|2778/9474|2778/9474|926/3157||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750407C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750407C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:52:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:17:11:6:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:68:41:27:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:43:28:15:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:52:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:52:20:13:7:21:95.24%:99:7.2544E-12:0:0:0:0:22 1/1:41:24:14:10:25:96%:99:3.101E-14:0:0:0:0:25 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:31:17:14:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:46:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:15:12:30:90%:99:5.1363E-16:0:0:0:0:30 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:36:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:39:30:17:13:31:96.77%:99:8.4556E-18:0:0:0:0:33 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 3750417 . T A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2768A>T|p.Tyr923Phe|2768/9474|2768/9474|923/3157||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750417T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750417T>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:11:13:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:50:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:36:19:17:37:97.3%:99:2.1762E-20:60:1:1:0:37 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:54:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:13:19:33:96.97%:99:4.7095E-18:39:1:1:0:34 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:21:12:9:22:95.45%:99:1.0931E-11:37:1:0:1:22 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:55:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:52:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:14:13:28:96.43%:99:3.7915E-15:39:1:0:1:28 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:28:15:13:29:96.55%:99:9.9776E-16:38:1:0:1:31 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:47:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 3750421 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2764G>A|p.Gly922Ser|2764/9474|2764/9474|922/3157||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750421C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750421C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:45:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:34:18:16:35:97.14%:99:3.2089E-19:33:1:0:1:35 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:65:38:27:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:50:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:54:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:54:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:54:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:31:19:12:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:40:20:20:41:97.56%:99:9.8874E-23:37:1:0:1:41 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 3750805 . C A . PASS AC=298;AF=1.00;AN=298;ANN=A|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2380G>T|p.Val794Phe|2380/9474|2380/9474|794/3157||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750805C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750805C>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:34:20:14:35:97.14%:99:3.5146E-20:0:0:0:0:37 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:55:39:16:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:39:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:15 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:55:36:19:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:44:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:40:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 3750808 . T C . PASS AC=298;AF=1.00;AN=298;ANN=C|missense_variant|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2377A>G|p.Asn793Asp|2377/9474|2377/9474|793/3157||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750808T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750808T>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:18:11:7:19:94.74%:92:5.6585E-10:34:1:1:0:19 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:57:39:18:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:37:22:15:38:97.37%:99:5.6582E-21:34:1:0:1:39 1/1:39:26:16:10:27:96.3%:99:1.4382E-14:37:1:1:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:24:16:8:25:96%:99:3.101E-14:0:0:0:0:25 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:26:20:6:27:96.3%:99:1.4382E-14:35:1:1:0:27 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:33:24:9:34:97.06%:99:1.2301E-18:39:1:1:0:35 1/1:40:55:37:18:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:14:9:5:15:93.33%:69:1.0315E-7:39:1:1:0:16 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:19:10:9:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:19:13:6:20:95%:98:1.5234E-10:34:1:1:0:20 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:25:17:8:26:96.15%:99:5.4444E-14:33:1:1:0:26 1/1:38:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:36:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 3750812 . C G . PASS AC=298;AF=1.00;AN=298;ANN=G|synonymous_variant|LOW|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2373G>C|p.Val791Val|2373/9474|2373/9474|791/3157||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750812C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750812C>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:21:12:9:22:95.45%:99:1.8578E-12:0:0:0:0:23 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:13:7:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:19:12:7:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:21:13:8:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:38:17:10:7:18:94.44%:93:4.2852E-10:0:0:0:0:19 1/1:38:15:9:6:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:41:34:27:7:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:23:15:8:23:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:19:13:6:21:90.48%:99:2.8292E-11:0:0:0:0:21 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:24:14:10:25:96%:99:3.101E-14:0:0:0:0:25 1/1:38:16:12:4:17:94.12%:87:1.6637E-9:0:0:0:0:18 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:57:38:19:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:23:13:10:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:36:22:14:37:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:23:14:9:25:92%:99:1.2146E-13:0:0:0:0:26 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:32:20:12:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:36:26:20:6:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:36:12:7:5:13:92.31%:64:3.698E-7:0:0:0:0:14 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:26:19:7:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:55:38:17:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:37:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:19:11:8:21:90.48%:99:2.8292E-11:0:0:0:0:21 1/1:40:13:5:8:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:15:13:2:16:93.75%:81:6.4467E-9:0:0:0:0:16 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:20:15:5:21:95.24%:99:7.2544E-12:0:0:0:0:22 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:28:21:7:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:42:16:11:5:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:37:19:10:9:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:17:13:4:18:94.44%:93:4.2852E-10:0:0:0:0:19 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:38:19:13:6:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:37:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:23:19:4:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:19:10:9:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:35:19:13:6:20:90.48%:99:2.8292E-11:0:0:0:0:21 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:21:9:12:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:36:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:33:21:12:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:39:31:18:13:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:33:23:10:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:39:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:35:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:23:15:8:24:95.83%:99:1.2146E-13:0:0:0:0:26 1/1:37:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:36:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 3750853 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2332C>T|p.Leu778Leu|2332/9474|2332/9474|778/3157||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750853G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750853G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:41:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:38:30:8:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:28 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:54:43:11:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:36 1/1:38:24:19:5:24:100%:99:3.101E-14:0:0:0:0:29 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:39:24:19:5:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:33:26:7:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:53:36:17:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:37:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:41:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:36:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:38:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:38:29:9:38:100%:99:1.4508E-22:0:0:0:0:46 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:36:29:7:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:20:16:4:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:29 MTB_anc 3750991 . ACACACCCGAGCCGAAGTTCAG A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|inframe_deletion|MODERATE|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.2173_2193delCTGAACTTCGGCTCGGGTGTG|p.Leu725_Val731del|2193/9474|2173/9474|725/3157||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3750992_3751012delCACACCCGAGCCGAAGTTCAG||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3750992_3751012delCACACCCGAGCCGAAGTTCAG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:35 0/0:0:0:0:0:13:0%:25:1E0:41:13:5:8:13 0/0:0:0:0:0:54:0%:99:1E0:41:54:35:19:54 0/0:0:0:0:0:19:0%:37:1E0:38:19:15:4:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:21 0/0:0:0:0:0:20:0%:36:1E0:35:20:8:12:22 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:42 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:27 0/0:0:0:0:0:25:0%:48:1E0:36:25:12:13:26 0/0:0:0:0:0:32:0%:59:1E0:36:32:15:17:32 0/0:0:0:0:0:14:0%:25:1E0:43:14:9:5:15 0/0:0:0:0:0:38:0%:70:1E0:38:38:22:16:39 0/0:0:0:0:0:26:0%:47:1E0:35:26:14:12:27 0/0:0:0:0:0:32:0%:59:1E0:37:32:13:19:33 0/0:0:0:0:0:23:0%:44:1E0:36:23:13:10:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:23 0/0:0:0:0:0:27:0%:52:1E0:38:27:11:16:28 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:22 0/0:0:0:0:0:25:0%:48:1E0:37:25:15:10:27 0/0:0:0:0:0:46:0%:85:1E0:36:46:19:27:48 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:38 0/0:60:1:1:0:22:4.55%:31:5E-1:39:21:8:13:22 0/0:0:0:0:0:12:0%:21:1E0:43:12:2:10:12 0/0:0:0:0:0:20:0%:36:1E0:39:20:6:14:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:32 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:19 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:37 0/0:0:0:0:0:10:0%:17:1E0:43:10:1:9:10 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:45 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:27 0/0:0:0:0:0:55:0%:99:1E0:39:55:28:27:57 0/0:0:0:0:0:48:0%:89:1E0:38:48:26:22:52 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:20 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:14 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:21 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:22 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:40:0%:74:1E0:38:40:19:21:40 0/0:0:0:0:0:38:0%:70:1E0:38:38:25:13:41 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:10:0%:17:1E0:44:10:5:5:11 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:39 0/0:0:0:0:0:15:0%:29:1E0:39:15:6:9:17 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:22 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:24 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:40 0/0:39:1:0:1:24:4.17%:34:5E-1:43:23:13:10:28 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:22 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:24:0%:44:1E0:39:24:9:15:25 0/0:0:0:0:0:28:0%:51:1E0:36:28:16:12:28 0/0:0:0:0:0:32:0%:59:1E0:37:32:14:18:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:8:18:27 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:45 0/0:0:0:0:0:49:0%:93:1E0:39:49:20:29:52 0/0:0:0:0:0:19:0%:37:1E0:39:19:15:4:19 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:35 0/0:0:0:0:0:15:0%:29:1E0:37:15:11:4:15 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:14 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:28 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:26 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:32 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:35 0/0:0:0:0:0:16:0%:29:1E0:41:16:5:11:17 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:31 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:36 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:15:0%:29:1E0:33:15:8:7:16 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:36 0/0:0:0:0:0:27:0%:52:1E0:36:27:12:15:27 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:39 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:23 0/0:0:0:0:0:32:0%:59:1E0:40:32:10:22:33 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:23 0/0:0:0:0:0:31:0%:59:1E0:38:31:18:13:31 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:20 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:24 0/0:0:0:0:0:27:0%:52:1E0:35:27:12:15:29 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:25 0/0:0:0:0:0:19:0%:37:1E0:36:19:12:7:20 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:24 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:22 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:38 0/0:0:0:0:0:18:0%:32:1E0:35:18:12:6:19 0/0:0:0:0:0:16:0%:29:1E0:39:16:12:4:20 0/0:0:0:0:0:17:0%:33:1E0:39:17:12:5:19 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:31:0%:59:1E0:37:31:13:18:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:10:19:31 0/0:0:0:0:0:16:0%:29:1E0:36:16:9:7:18 0/0:0:0:0:0:21:0%:40:1E0:37:21:14:7:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:28 0/0:0:0:0:0:23:0%:44:1E0:36:23:17:6:24 0/0:0:0:0:0:29:0%:55:1E0:36:29:18:11:31 0/0:0:0:0:0:34:0%:62:1E0:36:34:21:13:36 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:31 0/1:32:14:9:5:18:73.68%:59:1.2025E-6:34:5:4:1:19 0/1:40:26:16:10:29:89.66%:99:1.6496E-13:43:3:2:1:29 0/0:0:0:0:0:38:0%:70:1E0:37:38:24:14:41 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:22:0%:40:1E0:35:22:13:9:25 0/0:0:0:0:0:26:0%:47:1E0:35:26:12:14:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:17:8:26 0/0:0:0:0:0:22:0%:40:1E0:36:22:15:7:27 0/0:0:0:0:0:24:0%:44:1E0:35:24:15:9:26 0/0:0:0:0:0:31:0%:59:1E0:36:31:21:10:33 0/0:0:0:0:0:24:0%:44:1E0:35:24:13:11:25 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:20 0/0:0:0:0:0:21:0%:40:1E0:35:21:10:11:22 0/0:0:0:0:0:35:0%:67:1E0:36:35:22:13:38 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:22 0/0:0:0:0:0:22:0%:40:1E0:35:22:15:7:25 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:23 0/0:0:0:0:0:40:0%:74:1E0:36:40:23:17:44 0/0:0:0:0:0:36:0%:66:1E0:37:36:21:15:37 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:46 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:39 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:22 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:29 0/0:0:0:0:0:33:0%:63:1E0:35:33:18:15:33 0/0:0:0:0:0:45:0%:85:1E0:37:45:21:24:45 0/0:0:0:0:0:29:0%:55:1E0:37:29:19:10:29 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:18 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:30 0/0:0:0:0:0:30:0%:55:1E0:37:30:18:12:30 0/0:0:0:0:0:44:0%:81:1E0:37:44:28:16:45 0/0:0:0:0:0:42:0%:77:1E0:37:42:28:14:42 MTB_anc 3753116 . C T . PASS AC=298;AF=1.00;AN=298;ANN=T|synonymous_variant|LOW|PPE55_Rv3347c|gene3424|transcript|Transcript_gene3424|Coding|1/1|c.69G>A|p.Pro23Pro|69/9474|69/9474|23/3157||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3753116C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3753116C>T||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:58 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:23:15:8:24:95.83%:99:7.7525E-13:60:1:0:1:26 1/1:40:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:12:8:4:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:38:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:36:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:18:6:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:37:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:22:15:7:23:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:19:18:1:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:36:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 MTB_anc 3753415 . G C . PASS AC=296;AF=1.00;AN=296;ANN=C|intergenic_region|MODIFIER|PPE55_Rv3347c-Rv3348_Rv3348|gene3424-gene3425|intergenic_region|gene3424-gene3425|||n.3753415G>C||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:25:15:10:26:96.15%:99:7.9107E-15:0:0:0:0:28 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:48:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:41:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:36:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:14 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:44:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:39:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:38:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:31:4:27:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:28:3:25:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:38:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 MTB_anc 3753693 . G A . PASS AC=30;AF=1.00;AN=30;ANN=A|intergenic_region|MODIFIER|PPE55_Rv3347c-Rv3348_Rv3348|gene3424-gene3425|intergenic_region|gene3424-gene3425|||n.3753693G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3756446 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|PPE56_Rv3350c|gene3427|transcript|Transcript_gene3427|Coding|1/1|c.10657C>A|p.Pro3553Thr|10657/11151|10657/11151|3553/3716||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3756446G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3756446G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:56:35:21:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:36:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:53:39:14:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:26:11:15:27:96.3%:99:1.4382E-14:39:1:0:1:28 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:31:18:13:32:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:49:31:18:50:100%:99:3.925E-29:0:0:0:0:51 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:35:19:16:36:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:61:35:26:61:100%:99:2.609E-36:0:0:0:0:63 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 3757052 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|PPE56_Rv3350c|gene3427|transcript|Transcript_gene3427|Coding|1/1|c.10051A>G|p.Thr3351Ala|10051/11151|10051/11151|3351/3716||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3757052T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3757052T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:25:9:16:26:96.15%:99:5.4444E-14:34:1:1:0:26 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:25:11:14:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:20:9:11:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:20:4:16:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:48:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:35:15:20:36:97.22%:99:8.3613E-20:60:1:0:1:36 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:17:8:9:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:13:15:31:90.32%:99:4.194E-15:36:2:1:1:31 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:37:16:21:38:97.37%:99:5.6582E-21:38:1:0:1:39 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:24:12:12:25:96%:99:3.101E-14:0:0:0:0:26 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:16:18:35:97.14%:99:3.2089E-19:37:1:0:1:35 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:44:23:21:45:97.78%:99:4.4304E-25:60:1:0:1:45 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:28:16:12:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:34:20:14:35:97.14%:99:3.2089E-19:38:1:0:1:36 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:30:15:15:31:96.77%:99:6.8754E-17:37:1:0:1:32 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:28:13:15:29:96.55%:99:9.9776E-16:60:1:1:0:30 1/1:42:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:29:11:18:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:52 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 MTB_anc 3764814 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|PPE56_Rv3350c|gene3427|transcript|Transcript_gene3427|Coding|1/1|c.2289G>A|p.Ser763Ser|2289/11151|2289/11151|763/3716||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3764814C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3764814C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:42:55:24:31:55 0/0:0:0:0:0:21:0%:40:1E0:51:21:13:8:21 0/0:0:0:0:0:45:0%:85:1E0:46:45:26:19:45 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:22:7:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:28 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:38 0/0:0:0:0:0:24:0%:44:1E0:52:24:9:15:25 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:43 0/0:0:0:0:0:15:0%:29:1E0:50:15:4:11:15 0/0:60:1:0:1:52:1.92%:83:5E-1:46:51:25:26:52 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:21 0/0:0:0:0:0:19:0%:37:1E0:44:19:5:14:19 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:51 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:46 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:26 0/0:39:1:0:1:25:4%:38:5E-1:45:24:12:12:26 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:19 0/0:0:0:0:0:52:0%:96:1E0:45:52:29:23:52 0/0:0:0:0:0:39:0%:74:1E0:48:39:21:18:40 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:40 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:35:0%:67:1E0:47:35:22:13:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:39:1:0:1:32:3.12%:48:5E-1:46:31:13:18:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:42 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:47 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:40 0/0:0:0:0:0:20:0%:36:1E0:50:20:15:5:20 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:20:0%:36:1E0:42:20:5:15:20 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:49:0%:93:1E0:42:49:30:19:49 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:60:1:1:0:39:2.56%:62:5E-1:41:38:21:17:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:52:0%:96:1E0:41:52:25:27:53 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:32 0/0:37:1:0:1:47:2.13%:77:5E-1:46:46:26:20:47 0/0:0:0:0:0:15:0%:29:1E0:49:15:10:5:16 0/0:0:0:0:0:14:0%:25:1E0:50:14:7:7:14 0/0:38:1:0:1:37:2.7%:59:5E-1:47:36:18:18:37 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:25:0%:48:1E0:49:25:16:9:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:46 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:25 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:26 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:36:0%:66:1E0:50:36:16:20:37 0/0:0:0:0:0:51:0%:97:1E0:41:51:29:22:51 0/0:0:0:0:0:24:0%:44:1E0:43:24:16:8:24 0/0:0:0:0:0:52:0%:96:1E0:42:52:21:31:52 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:11:20:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:39 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:21 0/0:0:0:0:0:11:0%:22:1E0:42:11:4:7:11 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:38 0/0:0:0:0:0:41:0%:78:1E0:39:41:28:13:45 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:42 0/0:0:0:0:0:34:0%:62:1E0:40:34:24:10:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:16:28:45 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:52 0/0:0:0:0:0:52:0%:96:1E0:40:52:23:29:53 0/0:0:0:0:0:30:0%:55:1E0:42:30:8:22:31 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:49 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:23 0/0:0:0:0:0:44:0%:81:1E0:42:44:15:29:46 0/0:0:0:0:0:32:0%:59:1E0:36:32:18:14:37 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:28 0/0:0:0:0:0:34:0%:62:1E0:38:34:17:17:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:16:25:44 0/0:0:0:0:0:35:0%:67:1E0:38:35:14:21:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:24 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:60:1:0:1:47:2.13%:77:5E-1:38:46:23:23:47 0/0:37:1:1:0:29:3.45%:45:5E-1:45:28:10:18:30 0/0:45:2:0:2:51:3.92%:74:2.4752E-1:39:49:21:28:51 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:38 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:18 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:32 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:41 0/0:0:0:0:0:47:0%:89:1E0:41:47:20:27:47 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:42 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:60:0%:99:1E0:41:60:32:28:60 0/0:37:1:1:0:34:2.94%:51:5E-1:39:33:16:17:34 MTB_anc 3767677 . TC T . PASS AC=4;AF=0.013;AN=300;ANN=T|frameshift_variant|HIGH|Rv3351c_Rv3351c|gene3428|transcript|Transcript_gene3428|Coding|1/1|c.463delG|p.Glu155fs|463/795|463/795|155/264||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3767678delC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3767678delC||||||;HET=0;LOF=(Rv3351c_Rv3351c|gene3428|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:41 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:18 0/0:0:0:0:0:54:0%:99:1E0:49:54:26:28:55 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:21:0%:40:1E0:51:21:15:6:21 0/0:0:0:0:0:31:0%:59:1E0:50:31:20:11:31 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:6:15:21 0/0:39:1:1:0:30:3.33%:44:5E-1:52:29:13:16:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:21 0/0:0:0:0:0:58:0%:99:1E0:44:58:28:30:59 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:24 0/0:0:0:0:0:46:0%:85:1E0:48:46:18:28:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:21 0/0:0:0:0:0:25:0%:48:1E0:48:25:20:5:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:53 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:27 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:44 0/0:0:0:0:0:39:0%:74:1E0:45:39:14:25:40 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:33 0/0:0:0:0:0:36:0%:66:1E0:52:36:19:17:36 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:0:0:0:0:28:0%:51:1E0:46:28:9:19:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:60:0%:99:1E0:49:60:35:25:62 0/0:0:0:0:0:48:0%:89:1E0:47:48:26:22:48 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:24 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:45 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:43 0/0:0:0:0:0:17:0%:33:1E0:49:17:7:10:17 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:44 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:37 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:44 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:37 0/0:0:0:0:0:46:0%:85:1E0:46:46:22:24:49 0/0:0:0:0:0:55:0%:99:1E0:43:55:27:28:56 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:37:0%:70:1E0:49:37:17:20:38 0/0:0:0:0:0:50:0%:92:1E0:47:50:25:25:50 0/0:0:0:0:0:30:0%:55:1E0:46:30:21:9:30 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:21:9:30 0/0:0:0:0:0:26:0%:47:1E0:50:26:15:11:26 0/0:0:0:0:0:35:0%:67:1E0:51:35:16:19:35 0/0:0:0:0:0:56:0%:99:1E0:44:56:27:29:57 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:28:0%:51:1E0:50:28:12:16:30 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:49 0/0:0:0:0:0:29:0%:55:1E0:43:29:21:8:29 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:31:0%:59:1E0:51:31:17:14:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:31 0/0:32:1:1:0:34:2.94%:51:5E-1:49:33:19:14:35 0/0:0:0:0:0:22:0%:40:1E0:49:22:7:15:23 0/0:0:0:0:0:47:0%:89:1E0:41:47:18:29:47 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:50:0%:92:1E0:46:50:32:18:51 0/0:0:0:0:0:31:0%:59:1E0:46:31:11:20:31 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:42 0/0:0:0:0:0:29:0%:55:1E0:45:29:22:7:30 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:24:7:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:20:8:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:48:30:22:8:32 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:26 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:47 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:38 0/0:0:0:0:0:39:0%:74:1E0:40:39:23:16:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:49 0/0:0:0:0:0:39:0%:74:1E0:45:39:15:24:39 1/1:42:25:15:10:26:96.15%:99:5.4444E-14:31:1:0:1:26 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 0/0:0:0:0:0:50:0%:92:1E0:45:50:26:24:51 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:35 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:26 0/0:0:0:0:0:54:0%:99:1E0:41:54:35:19:57 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:42:0%:77:1E0:42:42:29:13:42 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:41 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:27:13:41 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:53 0/0:0:0:0:0:34:0%:62:1E0:43:34:26:8:34 0/0:0:0:0:0:54:0%:99:1E0:43:54:31:23:57 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:33 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:58:0%:99:1E0:39:58:26:32:58 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:46 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:17 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:46 0/0:0:0:0:0:59:0%:99:1E0:43:59:31:28:62 0/0:0:0:0:0:37:0%:70:1E0:40:37:28:9:37 MTB_anc 3771628 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv3359_Rv3359|gene3436|transcript|Transcript_gene3436|Coding|1/1|c.285C>A|p.Ile95Ile|285/1191|285/1191|95/396||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3771628C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3771628C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:38:18:20:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:39:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:36:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:37:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:42:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:49:30:19:49:100%:99:3.925E-29:0:0:0:0:52 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:36:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:37:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 MTB_anc 3772616 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|Rv3359_Rv3359-Rv3360_Rv3360|gene3436-gene3437|intergenic_region|gene3436-gene3437|||n.3772616A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:77:36:41:78:98.72%:99:6.8219E-46:0:0:0:0:79 1/1:50:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:23:11:12:24:95.83%:99:1.2146E-13:0:0:0:0:26 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:30:17:13:31:96.77%:99:6.8754E-17:38:1:1:0:31 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:30:17:13:31:96.77%:99:8.4556E-18:0:0:0:0:32 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:23:11:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:25:17:8:26:96.15%:99:5.4444E-14:35:1:0:1:29 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:42:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 3772940 . C T . PASS AC=124;AF=0.413;AN=300;ANN=T|missense_variant|MODERATE|Rv3360_Rv3360|gene3437|transcript|Transcript_gene3437|Coding|1/1|c.290C>T|p.Thr97Ile|290/369|290/369|97/122||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3772940C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3772940C>T||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:47 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:29 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:29 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:49:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 0/0:33:1:1:0:34:2.94%:51:5E-1:43:33:18:15:36 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:20 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:33 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:27 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:21 1/1:42:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:33 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:48:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 1/1:43:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:44 0/0:0:0:0:0:33:0%:63:1E0:38:33:22:11:33 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:24:1:1:0:54:1.85%:87:5E-1:42:53:32:21:54 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:50 1/1:50:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:40 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:21 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:39 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:33:0%:63:1E0:41:33:25:8:33 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:23 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:28 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:39:1:0:1:32:3.12%:48:5E-1:46:31:16:15:32 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:21:12:9:22:95.45%:99:1.0931E-11:30:1:0:1:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:20:7:28 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:25:0%:48:1E0:42:25:17:8:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:24:12:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:31 0/0:0:0:0:0:54:0%:99:1E0:39:54:32:22:56 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:23 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:58:0%:99:1E0:42:58:26:32:58 0/0:0:0:0:0:52:0%:96:1E0:40:52:22:30:52 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:53:0%:99:1E0:37:53:30:23:56 0/0:0:0:0:0:45:0%:85:1E0:38:45:26:19:46 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:41 0/0:0:0:0:0:44:0%:81:1E0:38:44:28:16:45 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:42 0/0:0:0:0:0:35:0%:67:1E0:38:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:37:30:17:13:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:28 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:39 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:31 0/0:0:0:0:0:41:0%:78:1E0:42:41:24:17:41 1/1:37:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:30 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:19:13:32 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:49:0%:93:1E0:40:49:26:23:49 1/1:40:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 3777612 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv3365c_Rv3365c-spoU_Rv3366|gene3442-gene3443|intergenic_region|gene3442-gene3443|||n.3777612C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:47:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:53 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:49:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:15:6:9:16:93.75%:75:2.8282E-8:38:1:0:1:16 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:47:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:51:13:7:6:14:92.86%:64:3.7391E-7:37:1:1:0:15 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:60:33:27:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:37:13:24:38:97.37%:99:5.6582E-21:60:1:1:0:39 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:54:36:18:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 MTB_anc 3779671 . C CGGCAACGGT . PASS AC=116;AF=0.487;AN=238;ANN=CGGCAACGGT|disruptive_inframe_insertion|MODERATE|PE_PGRS51_Rv3367|gene3444|transcript|Transcript_gene3444|Coding|1/1|c.1124_1132dupGCAACGGTG|p.Gly375_Gly377dup|1133/1767|1133/1767|378/588||INFO_REALIGN_3_PRIME,CGGCAACGGT|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3779671_3779672insGGCAACGGT||||||,CGGCAACGGT|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3779671_3779672insGGCAACGGT||||||;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:14:4:10:25:56%:53:4.7528E-6:35:11:1:10:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:1:7:13:61.54%:30:8.238E-4:36:5:0:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:11:1:10:14:78.57%:47:1.6951E-5:36:3:0:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:1:6:13:53.85%:26:2.2883E-3:36:5:1:4:13 0/1:37:17:3:14:20:85%:78:1.2848E-8:38:3:0:3:20 0/1:35:7:0:7:14:50%:25:2.8986E-3:36:7:1:6:14 0/1:35:9:0:9:14:64.29%:35:2.8986E-4:36:5:1:4:15 0/1:36:7:1:6:10:70%:28:1.548E-3:37:3:0:3:11 0/1:34:11:0:11:14:78.57%:47:1.6951E-5:35:3:1:2:14 0/1:36:7:0:7:10:70%:28:1.548E-3:36:3:0:3:10 0/1:36:6:0:6:8:75%:24:3.4965E-3:36:2:0:2:8 0/0:33:3:0:3:9:33.33%:4:1.0294E-1:36:6:1:5:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:33:8:0:8:12:61.54%:30:8.238E-4:36:5:0:5:13 0/1:36:11:0:11:14:78.57%:47:1.6951E-5:35:3:0:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:20:1:19:28:71.43%:84:3.9563E-9:36:8:1:7:28 0/1:35:12:4:8:17:66.67%:48:1.4831E-5:34:6:2:4:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:43:3:1:2:10:30%:4:1.0526E-1:36:7:3:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:13:0:13:16:81.25%:57:1.6121E-6:36:3:0:3:16 0/1:35:10:3:7:14:71.43%:41:7.6278E-5:36:4:1:3:14 0/1:37:12:1:11:19:63.16%:47:1.8611E-5:36:7:3:4:19 0/1:37:8:1:7:9:88.89%:36:2.0568E-4:37:1:0:1:9 0/1:33:6:0:6:7:85.71%:26:2.331E-3:38:1:0:1:7 0/1:35:6:0:6:9:66.67%:23:4.5249E-3:36:3:0:3:10 0/1:36:17:1:16:25:68%:69:1.0983E-7:35:8:0:8:25 0/1:34:12:2:10:13:85.71%:55:2.9913E-6:34:2:1:1:15 0/1:38:18:5:13:27:66.67%:73:4.8354E-8:37:9:3:6:28 0/1:36:11:1:10:15:73.33%:46:2.4988E-5:38:4:0:4:15 0/1:34:10:2:8:14:71.43%:41:7.6278E-5:37:4:1:3:15 0/1:33:10:5:5:13:71.43%:41:7.6278E-5:36:4:0:4:14 0/1:38:13:4:9:15:86.67%:60:8.7675E-7:32:2:0:2:16 0/1:36:7:1:6:10:70%:28:1.548E-3:35:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:35:4:0:4:13:30.77%:6:4.7826E-2:35:9:1:8:13 0/1:36:11:2:9:14:78.57%:47:1.6951E-5:37:3:1:2:14 0/1:35:7:2:5:15:46.67%:25:3.1609E-3:36:8:2:6:15 0/1:35:6:0:6:10:60%:22:5.418E-3:35:4:1:3:10 0/1:34:12:5:7:15:80%:52:5.2605E-6:37:3:1:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:15:0:15:24:62.5%:61:7.4178E-7:36:7:0:7:25 0/1:36:7:0:7:9:77.78%:29:1.1312E-3:38:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:33:10:1:9:13:71.43%:41:7.6278E-5:36:4:0:4:14 0/1:37:9:2:7:15:60%:34:3.4983E-4:36:6:0:6:15 1/1:36:12:0:12:13:92.31%:58:1.3461E-6:32:1:0:1:13 0/1:39:9:0:9:14:64.29%:35:2.8986E-4:35:5:1:4:16 0/1:37:6:1:5:9:66.67%:23:4.5249E-3:36:3:0:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:10:0:10:13:76.92%:42:5.3843E-5:37:3:1:2:13 0/1:35:12:0:12:17:70.59%:50:8.0605E-6:36:4:1:3:18 0/1:35:13:2:11:15:81.25%:57:1.6121E-6:37:3:0:3:16 0/1:36:11:0:11:18:61.11%:42:5.2969E-5:36:7:2:5:19 0/1:37:18:1:17:23:78.26%:79:1.1937E-8:35:5:2:3:23 0/1:35:8:1:7:12:66.67%:31:6.7304E-4:36:4:0:4:12 0/1:34:14:1:13:16:87.5%:65:2.5454E-7:38:2:0:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:34:10:1:9:16:58.82%:39:1.2413E-4:37:6:0:6:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:11:0:11:13:84.62%:49:1.0096E-5:38:2:0:2:13 0/1:34:7:1:6:11:63.64%:27:1.935E-3:37:4:2:2:11 0/1:35:16:0:16:23:66.67%:64:3.2617E-7:34:8:1:7:24 0/1:39:6:3:3:10:60%:22:5.418E-3:36:4:1:3:11 0/1:39:10:2:8:17:58.82%:38:1.4831E-4:36:7:1:6:18 0/1:33:8:2:6:10:72.73%:32:5.16E-4:36:3:1:2:11 0/1:34:11:3:8:12:84.62%:49:1.0096E-5:37:2:0:2:13 0/1:36:8:1:7:13:61.54%:30:8.238E-4:35:5:2:3:13 0/1:37:9:1:8:14:64.29%:36:2.2883E-4:36:4:1:3:14 0/1:36:9:2:7:13:69.23%:36:2.2883E-4:34:4:1:3:13 0/1:37:6:0:6:10:60%:22:5.418E-3:37:4:1:3:10 0/1:37:10:0:10:12:83.33%:47:1.7011E-5:38:1:0:1:13 0/1:36:6:0:6:8:75%:24:3.4965E-3:36:2:0:2:8 0/1:36:10:1:9:14:66.67%:41:7.6278E-5:37:4:0:4:15 0/1:37:6:0:6:9:66.67%:23:4.5249E-3:36:3:0:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:8:1:7:14:57.14%:30:9.6618E-4:36:6:1:5:14 0/1:36:8:1:7:11:72.73%:32:5.16E-4:36:3:1:2:11 0/1:35:7:1:6:17:41.18%:24:3.3988E-3:37:9:2:7:17 0/1:33:7:1:6:10:70%:28:1.548E-3:36:3:0:3:10 0/1:36:13:0:13:15:86.67%:60:8.7675E-7:34:2:1:1:15 0/1:34:13:3:10:14:86.67%:60:8.7675E-7:35:2:0:2:15 0/1:36:13:1:12:22:59.09%:50:9.5813E-6:36:9:4:5:23 0/1:37:9:1:8:13:69.23%:36:2.2883E-4:37:4:1:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:12:2:10:14:85.71%:55:2.9913E-6:35:2:0:2:14 0/1:32:9:1:8:14:64.29%:35:2.8986E-4:35:5:1:4:14 0/1:36:12:0:12:18:66.67%:48:1.4831E-5:38:6:0:6:18 0/1:34:10:1:9:12:83.33%:44:3.3652E-5:35:2:1:1:13 0/1:36:6:1:5:10:60%:22:5.418E-3:35:4:0:4:10 0/1:36:11:1:10:17:64.71%:43:4.3258E-5:35:6:0:6:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:11:1:10:15:73.33%:46:2.4988E-5:35:4:2:2:15 0/1:37:6:2:4:12:50%:21:6.865E-3:36:6:1:5:12 0/1:35:15:2:13:18:83.33%:68:1.4655E-7:37:3:0:3:19 0/1:35:12:2:10:17:70.59%:49:1.1285E-5:37:5:1:4:18 0/1:36:11:1:10:17:64.71%:43:4.3258E-5:37:6:1:5:17 0/1:36:9:0:9:17:52.94%:33:4.6348E-4:37:8:2:6:17 0/1:38:13:3:10:20:65%:51:6.4422E-6:36:7:2:5:21 0/0:35:3:0:3:10:30%:4:1.0526E-1:34:7:0:7:11 0/1:37:14:0:14:16:87.5%:69:1.0315E-7:38:1:0:1:17 0/1:33:12:0:12:19:63.16%:48:1.4831E-5:37:6:0:6:19 0/1:35:12:1:11:18:66.67%:48:1.4831E-5:36:6:1:5:19 0/1:31:6:0:6:16:35.29%:20:9.2021E-3:36:11:2:9:17 0/1:37:10:1:9:19:52.63%:37:1.9541E-4:36:9:0:9:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:15:1:14:22:68.18%:61:7.4178E-7:36:7:2:5:23 0/1:35:14:4:10:20:66.67%:56:2.1998E-6:37:7:3:4:21 0/1:34:13:0:13:17:76.47%:55:2.5647E-6:36:4:0:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:11:1:10:20:55%:41:7.2653E-5:34:9:2:7:20 0/1:35:8:0:8:12:66.67%:31:6.7304E-4:38:4:0:4:12 0/1:34:7:0:7:12:58.33%:26:2.2883E-3:35:5:1:4:12 0/1:36:6:0:6:9:66.67%:23:4.5249E-3:37:3:0:3:9 0/1:35:13:2:11:23:56.52%:49:1.1242E-5:35:10:0:10:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:33:6:0:6:8:75%:24:3.4965E-3:36:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:11:0:11:18:61.11%:42:5.2969E-5:35:7:2:5:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:6:0:6:8:75%:24:3.4965E-3:35:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 0/1:36:11:2:9:15:73.33%:46:2.4988E-5:38:4:0:4:15 0/1:35:16:1:15:18:88.89%:76:2.0936E-8:38:2:0:2:19 0/1:36:11:1:10:16:68.75%:44:3.3854E-5:36:5:0:5:16 0/1:36:8:1:7:9:88.89%:36:2.0568E-4:38:1:0:1:9 0/1:35:16:0:16:19:84.21%:73:4.357E-8:38:3:0:3:19 0/1:36:8:0:8:11:72.73%:32:5.16E-4:36:3:0:3:11 0/1:37:8:1:7:11:72.73%:32:5.16E-4:37:3:1:2:11 0/1:35:9:1:8:14:64.29%:35:2.8986E-4:36:5:0:5:14 0/1:35:13:0:13:17:72.22%:54:3.7078E-6:35:5:1:4:18 0/1:34:9:1:8:13:69.23%:36:2.2883E-4:37:4:0:4:13 0/1:36:10:1:9:12:76.92%:44:3.3652E-5:38:2:1:1:13 0/1:37:6:0:6:10:60%:23:4.5249E-3:35:3:1:2:10 0/1:36:15:1:14:24:62.5%:59:1.196E-6:35:9:4:5:24 0/1:38:11:0:11:15:73.33%:46:2.4988E-5:35:4:1:3:15 0/1:38:9:1:8:12:75%:37:1.6826E-4:38:3:0:3:12 MTB_anc 3783058 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|dnaE2_Rv3370c|gene3447|transcript|Transcript_gene3447|Coding|1/1|c.1683C>T|p.Ser561Ser|1683/3240|1683/3240|561/1079||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3783058G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3783058G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:60:20:40:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:60:17:43:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:42:10:32:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:40:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:13:24:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:42:21:21:43:97.67%:99:6.6289E-24:38:1:0:1:43 1/1:42:57:20:37:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:47:15:32:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:35:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:57:24:33:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:39:62:21:41:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:49:18:31:49:100%:99:3.925E-29:0:0:0:0:52 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:63:25:38:63:100%:99:1.657E-37:0:0:0:0:64 1/1:41:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:59:18:41:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 MTB_anc 3785946 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3371_Rv3371|gene3448|transcript|Transcript_gene3448|Coding|1/1|c.1015G>A|p.Gly339Arg|1015/1341|1015/1341|339/446||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3785946G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3785946G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:50:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:48:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:51:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:62:25:37:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:55:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:53:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:44:21:23:45:97.78%:99:4.4304E-25:51:1:1:0:45 1/1:39:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:48:18:30:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 MTB_anc 3786033 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3371_Rv3371|gene3448|transcript|Transcript_gene3448|Coding|1/1|c.1102G>A|p.Val368Ile|1102/1341|1102/1341|368/446||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3786033G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3786033G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:22:12:10:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:34:20:14:35:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:36:18:18:37:97.3%:99:2.1762E-20:38:1:0:1:37 1/1:44:53:16:37:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:60:24:36:60:100%:99:1.035E-35:0:0:0:0:60 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:40:25:15:42:95.24%:99:9.3017E-24:0:0:0:0:42 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:36:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:42:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:61:31:30:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 3788365 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|stop_gained&splice_region_variant|HIGH|echA18_Rv3373|gene3450|transcript|Transcript_gene3450|Coding|1/1|c.640G>T|p.Gly214*|640/642|640/642|214/213||WARNING_TRANSCRIPT_NO_STOP_CODON,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3788365G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3788365G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:48:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:45:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:51:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:48:29:20:9:30:96.67%:99:2.6212E-16:37:1:1:0:31 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:49:41:15:26:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:46:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:56:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:61:32:29:61:100%:99:2.609E-36:0:0:0:0:62 1/1:47:31:14:17:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:49:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:51:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:43:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:60:35:25:60:100%:99:1.035E-35:0:0:0:0:64 1/1:40:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:37:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:39:34:13:21:35:97.14%:99:3.5146E-20:0:0:0:0:40 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:49 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:37:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:43:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 3791903 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3377c_Rv3377c|gene3454|transcript|Transcript_gene3454|Coding|1/1|c.451C>T|p.Arg151Cys|451/1506|451/1506|151/501||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3791903G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3791903G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:46:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:51:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:21:9:12:22:95.45%:99:1.0931E-11:60:1:0:1:23 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:49:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:47:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:54:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:65:34:31:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:53:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:26:10:16:27:96.3%:99:1.4382E-14:34:1:0:1:28 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:51:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:67 1/1:45:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:61:35:26:61:100%:99:2.609E-36:0:0:0:0:62 1/1:39:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:69:36:33:69:100%:99:4.233E-41:0:0:0:0:70 1/1:39:75:39:36:75:100%:99:1.0773E-44:0:0:0:0:75 1/1:42:61:37:24:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:68:30:38:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:89:45:44:89:100%:99:4.3706E-53:0:0:0:0:91 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 3801036 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv3387_Rv3387|gene3462|transcript|Transcript_gene3462|Coding|1/1|c.251T>C|p.Val84Ala|251/678|251/678|84/225||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3801036T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3801036T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:23:21:46 0/0:0:0:0:0:18:0%:32:1E0:51:18:6:12:18 0/0:0:0:0:0:41:0%:78:1E0:43:41:26:15:42 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:24 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:39 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:17 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:45 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:35:1:0:1:26:3.85%:38:5E-1:46:25:11:14:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:37 0/0:0:0:0:0:15:0%:29:1E0:47:15:8:7:16 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:38 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:35 0/0:0:0:0:0:29:0%:55:1E0:46:29:10:19:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:13:23:38 0/0:0:0:0:0:51:0%:97:1E0:45:51:31:20:53 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:46 0/0:0:0:0:0:31:0%:59:1E0:36:31:11:20:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:5:22:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:46 0/0:0:0:0:0:21:0%:40:1E0:41:21:14:7:22 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:40 0/0:0:0:0:0:51:0%:97:1E0:41:51:22:29:51 0/0:0:0:0:0:41:0%:78:1E0:47:41:18:23:41 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:17 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:36 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:35 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:21 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:40 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:17:8:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:49:0%:93:1E0:47:49:25:24:49 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:41 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:43 0/0:0:0:0:0:40:0%:74:1E0:40:40:22:18:42 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:45:0%:85:1E0:40:45:18:27:47 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:35 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:19:0%:37:1E0:46:19:8:11:19 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:43 0/0:0:0:0:0:23:0%:44:1E0:49:23:10:13:23 0/0:0:0:0:0:54:0%:99:1E0:41:54:24:30:54 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:30 0/0:0:0:0:0:56:0%:99:1E0:44:56:24:32:57 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:48 0/0:0:0:0:0:37:0%:70:1E0:38:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:39:25:11:14:28 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:38 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:39 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:27 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:19 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:37 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:25 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:41 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/1:43:15:9:6:23:65.22%:60:9.5813E-7:42:8:2:6:23 0/1:42:31:16:15:57:54.39%:99:1.5588E-12:40:26:15:11:60 0/0:0:0:0:0:56:0%:99:1E0:42:56:23:33:58 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:28 0/0:0:0:0:0:43:0%:82:1E0:38:43:19:24:46 0/0:0:0:0:0:45:0%:85:1E0:39:45:21:24:45 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:40 0/0:0:0:0:0:31:0%:59:1E0:37:31:17:14:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:46 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:33 0/0:0:0:0:0:34:0%:62:1E0:38:34:13:21:39 0/0:0:0:0:0:26:0%:47:1E0:36:26:14:12:27 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:34 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:48:0%:89:1E0:39:48:30:18:50 0/0:0:0:0:0:51:0%:97:1E0:43:51:31:20:55 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:28 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:36 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:40 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:25 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:41 0/0:0:0:0:0:57:0%:99:1E0:41:57:31:26:59 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:39 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:39 MTB_anc 3801942 . A C . PASS AC=2;AF=6.711e-03;AN=298;ANN=C|missense_variant|MODERATE|PE_PGRS52_Rv3388|gene3463|transcript|Transcript_gene3463|Coding|1/1|c.290A>C|p.Gln97Pro|290/2196|290/2196|97/731||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3801942A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3801942A>C||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:42:51:20:31:54 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:45:0%:85:1E0:47:45:21:24:45 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:16 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:29 0/0:0:0:0:0:17:0%:33:1E0:46:17:7:10:18 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:39 0/0:0:0:0:0:18:0%:32:1E0:51:18:7:11:18 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:48 0/0:0:0:0:0:33:0%:63:1E0:43:33:23:10:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:17 0/0:0:0:0:0:16:0%:29:1E0:41:16:10:6:16 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:44:0%:81:1E0:44:44:15:29:44 0/0:0:0:0:0:18:0%:32:1E0:51:18:11:7:18 0/0:0:0:0:0:23:0%:44:1E0:49:23:8:15:24 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:42 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:31 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:52:0%:96:1E0:46:52:27:25:52 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:42 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:48 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:25:0%:48:1E0:48:25:7:18:25 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:45 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:33 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:49 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:42 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:44 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:25 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:17:0%:33:1E0:49:17:11:6:18 0/0:0:0:0:0:20:0%:36:1E0:51:20:9:11:20 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:22 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:49 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:29 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:48:0%:89:1E0:43:48:16:32:49 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:41 0/0:0:0:0:0:33:0%:63:1E0:49:33:18:15:33 0/0:0:0:0:0:23:0%:44:1E0:39:23:9:14:23 0/0:0:0:0:0:17:0%:33:1E0:44:17:9:8:17 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:34:0%:62:1E0:50:34:20:14:35 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:44 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:18 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:14:26:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:44 0/0:0:0:0:0:50:0%:92:1E0:47:50:25:25:51 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:29 0/0:0:0:0:0:46:0%:85:1E0:41:46:25:21:46 0/0:0:0:0:0:44:0%:81:1E0:38:44:21:23:48 0/0:0:0:0:0:44:0%:81:1E0:38:44:26:18:46 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:35 0/0:0:0:0:0:46:0%:85:1E0:41:46:13:33:48 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:47 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:38 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:45 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:27 0/0:0:0:0:0:42:0%:77:1E0:39:42:25:17:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:6:19:26 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:36 0/0:0:0:0:0:44:0%:81:1E0:39:44:16:28:46 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:26 0/0:0:0:0:0:35:0%:67:1E0:41:35:9:26:35 0/0:0:0:0:0:15:0%:29:1E0:43:15:5:10:15 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:18 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:41 0/0:0:0:0:0:20:0%:36:1E0:42:20:7:13:20 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:39 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:19 MTB_anc 3802202 . G T . PASS AC=267;AF=0.996;AN=268;ANN=T|missense_variant|MODERATE|PE_PGRS52_Rv3388|gene3463|transcript|Transcript_gene3463|Coding|1/1|c.550G>T|p.Gly184Trp|550/2196|550/2196|184/731||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3802202G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3802202G>T||||||;WT=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:23:2:21:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:18:4:14:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:18:3:15:19:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:3:10:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:24:3:21:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:27 1/1:37:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:14:3:11:15:93.33%:69:1.0315E-7:26:1:1:0:15 1/1:37:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:15 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:24:3:21:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:38:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:38:7:2:5:8:87.5%:31:6.993E-4:37:1:0:1:8 1/1:36:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:13:2:11:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:1:10:12:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:10:2:8:11:100%:52:5.4125E-6:0:0:0:0:13 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:19:2:17:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:36:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:31:1:30:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:13 1/1:37:14:0:14:15:93.33%:69:1.0315E-7:26:1:1:0:16 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:22:1:21:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3802704 . G C . PASS AC=163;AF=0.994;AN=164;ANN=C|missense_variant|MODERATE|PE_PGRS52_Rv3388|gene3463|transcript|Transcript_gene3463|Coding|1/1|c.1052G>C|p.Gly351Ala|1052/2196|1052/2196|351/731||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3802704G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3802704G>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:33:11:3:8:13:84.62%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:33:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:21:4:17:22:100%:99:1.8578E-12:0:0:0:0:23 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:9:0:9:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:9:2:7:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:1:9:11:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:2:9:12:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3806981 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|acrA1_Rv3391|gene3466|transcript|Transcript_gene3466|Coding|1/1|c.1361A>C|p.Asp454Ala|1361/1953|1361/1953|454/650||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3806981A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3806981A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:53:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:48:23:9:14:24:95.83%:99:7.7525E-13:37:1:0:1:25 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:44:17:27:45:97.78%:99:4.4304E-25:37:1:0:1:46 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:39:19:20:40:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:49:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:19:12:7:20:95%:98:1.5234E-10:37:1:1:0:20 1/1:49:22:14:8:23:95.65%:99:2.9149E-12:60:1:0:1:23 1/1:51:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:59:23:36:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:65:29:36:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:44:24:20:45:97.78%:99:4.4304E-25:37:1:1:0:45 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 MTB_anc 3808103 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|cmaA1_Rv3392c|gene3467|transcript|Transcript_gene3467|Coding|1/1|c.335G>A|p.Ser112Asn|335/864|335/864|112/287||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3808103C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3808103C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:66:30:36:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:48:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:34:20:14:35:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:44:74:38:36:74:100%:99:4.2804E-44:0:0:0:0:75 1/1:45:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:41:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:63:29:34:63:100%:99:1.657E-37:0:0:0:0:63 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 3811629 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv3395c_Rv3395c|gene3470|transcript|Transcript_gene3470|Coding|1/1|c.8T>C|p.Val3Ala|8/615|8/615|3/204||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3811629A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3811629A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:53:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:53:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:20:8:12:21:95.24%:99:4.0873E-11:60:1:0:1:21 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:63:33:30:63:100%:99:1.657E-37:0:0:0:0:63 1/1:47:49:20:29:50:98%:99:5.0549E-28:37:1:1:0:50 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:36:23:13:37:97.3%:99:2.1762E-20:60:1:0:1:37 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:51:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:28:17:11:30:93.33%:99:4.194E-15:48:2:2:0:30 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 3812821 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|guaA_Rv3396c|gene3472|transcript|Transcript_gene3472|Coding|1/1|c.1258T>G|p.Leu420Val|1258/1578|1258/1578|420/525||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3812821A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3812821A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:50:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:68:33:35:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:17:12:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:53:22:31:54:98.15%:99:2.2126E-30:34:1:1:0:54 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:14:19:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:24:8:16:25:96%:99:2.0568E-13:38:1:1:0:27 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:47 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:52:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:16:17:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:49:19:30:49:100%:99:3.925E-29:0:0:0:0:52 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 3813314 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|guaA_Rv3396c|gene3472|transcript|Transcript_gene3472|Coding|1/1|c.765T>C|p.Cys255Cys|765/1578|765/1578|255/525||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3813314A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3813314A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:51:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:21:11:10:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:52:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:60:27:33:60:100%:99:1.035E-35:0:0:0:0:61 1/1:49:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:21:14:36:97.22%:99:8.3613E-20:37:1:0:1:37 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:15:20:36:97.22%:99:8.3613E-20:38:1:1:0:37 1/1:44:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:69:31:38:69:100%:99:4.233E-41:0:0:0:0:69 1/1:43:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 3817261 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv3400_Rv3400|gene3476|transcript|Transcript_gene3476|Coding|1/1|c.23A>C|p.Asn8Thr|23/789|23/789|8/262||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3817261A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3817261A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:52 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:29 0/0:0:0:0:0:51:0%:97:1E0:46:51:29:22:53 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:23:0%:44:1E0:49:23:16:7:24 0/0:0:0:0:0:39:0%:74:1E0:48:39:21:18:39 0/0:0:0:0:0:36:0%:66:1E0:47:36:23:13:38 0/0:0:0:0:0:52:0%:96:1E0:43:52:20:32:52 0/0:0:0:0:0:27:0%:52:1E0:54:27:12:15:27 0/0:0:0:0:0:50:0%:92:1E0:45:50:26:24:52 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:24 0/1:46:13:4:9:26:50%:47:1.6379E-5:43:13:4:9:26 0/0:0:0:0:0:31:0%:59:1E0:48:31:14:17:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:59:0%:99:1E0:43:59:29:30:59 0/0:0:0:0:0:25:0%:48:1E0:48:25:17:8:25 0/0:0:0:0:0:44:0%:81:1E0:48:44:20:24:45 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:20:0%:36:1E0:47:20:7:13:20 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:21 0/0:0:0:0:0:20:0%:36:1E0:51:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:33 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:50:34:17:17:35 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:39 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:34 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:65:0%:99:1E0:45:65:33:32:66 0/0:0:0:0:0:43:0%:82:1E0:45:43:17:26:44 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:48 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:33 0/0:0:0:0:0:20:0%:36:1E0:48:20:8:12:20 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:10:22:32 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:47:0%:89:1E0:48:47:17:30:47 0/0:0:0:0:0:14:0%:25:1E0:47:14:8:6:14 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:43:0%:82:1E0:46:43:17:26:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:50:0%:92:1E0:41:50:24:26:51 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:40:0%:74:1E0:46:40:23:17:42 0/0:0:0:0:0:44:0%:81:1E0:51:44:20:24:44 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:43 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:36 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:64:0%:99:1E0:43:64:24:40:64 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:36 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:10:22:32 0/0:0:0:0:0:40:0%:74:1E0:49:40:18:22:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:36:0%:66:1E0:52:36:21:15:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:14:0%:25:1E0:42:14:7:7:16 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:13:0%:25:1E0:42:13:7:6:13 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:36 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:23:0%:44:1E0:46:23:7:16:23 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:49:36:13:23:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:49:0%:93:1E0:45:49:16:33:50 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:26:0%:47:1E0:47:26:7:19:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:39 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:36 0/0:0:0:0:0:42:0%:77:1E0:41:42:16:26:43 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:30 0/0:0:0:0:0:27:0%:52:1E0:49:27:17:10:27 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:44 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:33 0/0:0:0:0:0:32:0%:59:1E0:37:32:16:16:32 0/0:0:0:0:0:53:0%:99:1E0:40:53:23:30:55 0/0:0:0:0:0:32:0%:59:1E0:39:32:18:14:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:56:0%:99:1E0:40:56:24:32:56 0/0:0:0:0:0:54:0%:99:1E0:43:54:28:26:54 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:33 0/0:0:0:0:0:58:0%:99:1E0:40:58:27:31:60 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:50:0%:92:1E0:42:50:20:30:51 0/0:0:0:0:0:55:0%:99:1E0:38:55:27:28:57 0/0:0:0:0:0:43:0%:82:1E0:40:43:23:20:44 0/0:0:0:0:0:47:0%:89:1E0:42:47:18:29:47 0/0:0:0:0:0:60:0%:99:1E0:41:60:29:31:62 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:41 0/0:0:0:0:0:40:0%:74:1E0:42:40:11:29:42 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:43 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:52 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:53:0%:99:1E0:38:53:27:26:53 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:41 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:41 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:46:0%:85:1E0:44:46:18:28:46 0/0:0:0:0:0:52:0%:96:1E0:43:52:20:32:52 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:45:0%:85:1E0:42:45:12:33:45 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:62:0%:99:1E0:44:62:23:39:62 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 MTB_anc 3820407 . A G . PASS AC=86;AF=0.287;AN=300;ANN=G|intergenic_region|MODIFIER|Rv3401_Rv3401-Rv3402c_Rv3402c|gene3477-gene3478|intergenic_region|gene3477-gene3478|||n.3820407A>G||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:35:9:6:3:56:16.07%:28:1.3788E-3:41:47:25:22:67 0/0:60:1:0:1:16:6.25%:21:5E-1:48:15:11:4:18 0/0:39:6:4:2:47:12.77%:42:1.3188E-2:42:41:18:23:49 0/0:35:6:4:2:22:27.27%:9:1.057E-2:43:16:10:6:26 0/1:40:8:4:4:25:32%:26:2.0146E-3:42:17:9:8:27 0/0:36:6:6:0:24:25%:11:1.0968E-2:39:18:12:6:28 0/1:43:14:9:5:34:41.18%:49:1.1295E-5:43:20:8:12:36 0/1:38:9:5:4:38:23.68%:29:1.1442E-3:43:29:14:15:41 0/0:36:3:2:1:18:16.67%:14:1.1429E-1:39:15:6:9:19 0/0:35:3:3:0:37:8.11%:43:1.1986E-1:45:34:24:10:41 0/0:37:4:2:2:23:17.39%:18:5.4264E-2:39:19:9:10:25 0/1:38:9:4:5:31:29.03%:30:9.9376E-4:36:22:17:5:39 0/0:0:0:0:0:11:0%:22:1E0:45:11:6:5:11 0/1:37:10:4:6:52:19.23%:32:6.0611E-4:40:42:24:18:58 0/0:35:3:2:1:31:9.68%:34:1.1885E-1:38:28:12:16:34 0/1:38:10:9:1:29:34.48%:34:3.8387E-4:40:19:8:11:31 0/0:30:4:1:3:35:11.43%:35:5.7106E-2:39:31:16:15:37 0/0:41:5:3:2:21:23.81%:12:2.3921E-2:40:16:6:10:22 0/0:32:2:0:2:15:13.33%:16:2.4138E-1:42:13:6:7:17 0/0:33:3:0:3:18:16.67%:14:1.1429E-1:44:15:9:6:21 0/0:35:4:2:2:33:12.12%:32:5.6777E-2:39:29:15:14:35 0/1:33:8:6:2:51:15.69%:25:2.9037E-3:38:43:25:18:66 0/0:37:4:2:2:23:17.39%:18:5.4264E-2:44:19:6:13:24 0/0:38:5:5:0:41:12.2%:38:2.7465E-2:45:36:17:19:44 0/0:37:3:1:2:45:6.67%:56:1.2079E-1:38:42:16:26:47 0/1:44:7:4:3:36:19.44%:22:5.6667E-3:42:29:13:16:40 0/0:37:4:3:1:28:14.29%:23:5.5746E-2:44:24:12:12:33 0/0:37:4:3:1:27:14.81%:23:5.5494E-2:38:23:12:11:30 0/1:35:11:7:4:39:28.21%:36:2.1547E-4:44:28:14:14:41 0/0:38:4:3:1:36:11.11%:34:5.7257E-2:41:32:16:16:40 0/1:34:7:5:2:43:16.28%:22:5.9972E-3:41:36:18:18:50 0/1:37:7:6:1:38:18.42%:22:5.7727E-3:46:31:12:19:41 0/1:45:7:6:1:33:21.21%:22:5.4855E-3:42:26:13:13:35 0/1:35:7:3:4:25:28%:23:4.8126E-3:36:18:6:12:32 0/0:33:2:1:1:27:6.9%:34:2.4528E-1:46:25:8:17:29 0/1:41:11:6:5:44:25%:36:2.3962E-4:38:33:20:13:49 0/1:35:16:5:11:59:27.12%:53:4.7113E-6:43:43:22:21:61 0/1:39:12:8:4:76:15.79%:38:1.5255E-4:44:64:32:32:84 0/1:40:7:3:4:51:13.73%:22:6.2693E-3:45:44:20:24:54 0/1:40:13:9:4:50:26%:43:4.8866E-5:39:36:23:13:58 0/1:39:8:4:4:40:20%:25:2.653E-3:39:32:21:11:47 0/1:36:7:3:4:33:21.21%:22:5.4855E-3:42:26:14:12:38 0/1:36:7:3:4:30:23.33%:22:5.2713E-3:39:23:12:11:33 0/1:33:8:4:4:43:18.6%:25:2.7329E-3:44:35:18:17:46 0/1:36:9:8:1:48:18.75%:28:1.2935E-3:42:39:19:20:53 0/1:35:12:2:10:49:24.49%:39:1.1358E-4:43:37:19:18:57 0/0:38:2:2:0:32:6.25%:40:2.4603E-1:43:30:15:15:37 0/1:37:8:6:2:53:15.09%:25:2.9389E-3:39:45:23:22:60 0/1:43:11:4:7:59:18.64%:35:2.925E-4:39:48:26:22:63 0/0:37:1:0:1:29:3.45%:45:5E-1:41:28:16:12:31 0/0:35:2:2:0:19:10.53%:21:2.4324E-1:44:17:10:7:19 0/1:38:12:9:3:56:21.43%:38:1.2642E-4:42:44:25:19:63 0/0:43:4:2:2:25:16%:21:5.4928E-2:50:21:8:13:26 0/1:36:8:4:4:35:22.86%:26:2.4931E-3:43:27:9:18:38 0/0:37:6:4:2:37:16.22%:28:1.2549E-2:39:31:21:10:41 0/1:36:10:8:2:42:23.81%:32:5.3293E-4:39:32:17:15:51 0/1:34:7:4:3:51:13.73%:22:6.2693E-3:39:44:23:21:56 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:32 0/1:37:8:5:3:52:15.38%:25:2.9216E-3:41:44:16:28:54 0/1:43:12:8:4:54:22.22%:39:1.23E-4:45:42:25:17:60 0/1:38:9:7:2:28:32.14%:30:8.8132E-4:43:18:8:10:31 0/1:37:7:6:1:41:17.07%:22:5.9136E-3:38:34:13:21:47 0/0:33:5:1:4:49:10.2%:50:2.8079E-2:38:44:23:21:55 0/0:40:6:3:3:32:18.75%:20:1.2087E-2:42:26:10:16:33 0/1:36:12:7:5:50:24%:39:1.1557E-4:46:38:17:21:54 0/1:37:10:10:0:71:14.08%:31:6.9515E-4:45:61:32:29:75 0/1:35:7:4:3:26:26.92%:23:4.9169E-3:41:19:13:6:30 0/1:36:8:5:3:49:16.33%:25:2.8658E-3:43:41:16:25:53 0/0:41:5:4:1:31:16.67%:21:2.6093E-2:45:25:13:12:34 0/0:38:2:2:0:27:7.41%:34:2.4528E-1:45:25:11:14:28 0/0:47:6:3:3:30:20%:18:1.186E-2:42:24:17:7:37 0/1:44:8:6:2:37:21.62%:25:2.5617E-3:44:29:16:13:43 0/0:43:4:3:1:25:16%:21:5.4928E-2:45:21:11:10:27 0/1:37:8:6:2:41:19.51%:25:2.6808E-3:46:33:11:22:44 0/0:37:6:4:2:56:10.71%:53:1.3571E-2:39:50:22:28:59 0/1:37:9:6:3:33:27.27%:29:1.042E-3:42:24:13:11:35 0/0:45:3:1:2:34:8.82%:37:1.1923E-1:43:30:15:15:37 0/1:39:10:6:4:33:30.3%:33:4.3872E-4:44:23:11:12:36 0/0:36:3:2:1:38:7.89%:43:1.2E-1:41:35:20:15:43 0/1:35:9:6:3:41:21.95%:29:1.1955E-3:42:32:20:12:43 0/0:35:6:5:1:35:17.14%:25:1.238E-2:39:29:9:20:38 0/1:38:12:7:5:60:20%:38:1.3273E-4:41:48:29:19:63 0/1:36:12:8:4:38:31.58%:40:8.7276E-5:38:26:13:13:43 0/0:37:5:2:3:32:15.62%:24:2.6412E-2:46:27:11:16:34 0/1:36:7:3:4:42:16.67%:22:5.9563E-3:40:35:22:13:50 0/1:34:9:6:3:42:21.43%:29:1.2112E-3:37:33:17:16:51 0/1:40:10:6:4:42:23.81%:32:5.3293E-4:38:32:16:16:47 0/0:33:3:1:2:16:18.75%:11:1.129E-1:42:13:7:6:21 0/1:40:7:3:4:36:19.44%:22:5.6667E-3:45:29:14:15:38 0/1:39:7:6:1:35:20%:22:5.6095E-3:47:28:12:16:36 0/1:38:14:8:6:45:31.11%:47:1.8462E-5:42:31:17:14:50 0/1:37:7:5:2:33:21.21%:22:5.4855E-3:47:26:14:12:34 0/1:35:14:6:8:56:25%:46:2.416E-5:40:42:18:24:66 0/0:37:6:3:3:26:23.08%:13:1.1309E-2:42:20:7:13:28 0/1:39:11:9:2:45:24.44%:36:2.4398E-4:40:34:15:19:51 0/0:40:6:3:3:27:22.22%:16:1.1461E-2:41:21:7:14:30 0/0:37:4:3:1:21:19.05%:15:5.3471E-2:37:17:10:7:21 0/1:35:11:7:4:46:23.91%:36:2.4819E-4:42:35:17:18:47 0/0:35:5:3:2:34:14.71%:27:2.6693E-2:39:29:15:14:41 0/1:39:10:6:4:37:27.03%:33:4.8486E-4:42:27:10:17:41 0/1:38:13:8:5:35:37.14%:45:3.1103E-5:40:22:12:10:36 0/0:37:4:3:1:30:13.33%:26:5.62E-2:40:26:12:14:35 0/1:32:7:2:5:28:25%:22:5.1054E-3:37:21:15:6:32 0/0:33:6:4:2:21:28.57%:9:1.0344E-2:34:15:10:5:24 0/0:35:3:1:2:21:14.29%:19:1.1585E-1:36:18:12:6:25 0/1:37:13:7:6:33:39.39%:45:2.6443E-5:43:19:9:10:39 0/0:34:6:2:4:27:22.22%:16:1.1461E-2:43:21:6:15:31 0/0:37:5:3:2:32:15.62%:24:2.6412E-2:45:27:12:15:38 0/1:38:9:5:4:42:21.43%:29:1.2112E-3:40:33:18:15:49 0/0:55:2:2:0:24:8.33%:27:2.4468E-1:43:22:10:12:28 0/1:45:8:5:3:39:20.51%:25:2.624E-3:39:31:19:12:47 0/1:36:7:3:4:34:20.59%:22:5.5492E-3:46:27:20:7:39 0/0:35:4:1:3:18:22.22%:10:5.1948E-2:35:14:11:3:23 0/1:40:12:8:4:49:24.49%:39:1.1358E-4:41:37:20:17:52 0/1:37:10:9:1:39:25.64%:32:5.0524E-4:36:29:20:9:46 0/1:35:10:6:4:50:20%:32:5.9342E-4:37:40:26:14:54 0/0:0:0:0:0:19:0%:37:1E0:39:19:14:5:23 0/1:36:9:6:3:35:25.71%:29:1.0857E-3:42:26:17:9:38 0/0:38:2:2:0:15:13.33%:16:2.4138E-1:38:13:7:6:18 0/1:36:12:9:3:55:21.82%:39:1.2473E-4:40:43:22:21:62 0/1:38:8:6:2:56:14.29%:25:2.9874E-3:42:48:19:29:60 0/1:39:9:2:7:45:20%:29:1.2547E-3:38:36:19:17:46 0/0:0:0:0:0:24:0%:44:1E0:35:24:18:6:26 0/1:35:9:6:3:33:27.27%:29:1.042E-3:36:24:15:9:39 0/1:35:9:6:3:33:27.27%:29:1.042E-3:38:24:17:7:37 0/0:34:6:4:2:35:17.14%:25:1.238E-2:36:29:19:10:39 0/1:35:7:4:3:35:20%:22:5.6095E-3:35:28:22:6:40 0/0:36:6:5:1:26:23.08%:13:1.1309E-2:37:20:11:9:31 0/0:35:5:3:2:28:17.86%:19:2.5729E-2:35:23:12:11:28 0/1:34:10:5:5:38:26.32%:33:4.9525E-4:35:28:20:8:43 0/1:35:11:8:3:30:36.67%:37:1.594E-4:35:19:14:5:33 0/0:30:6:3:3:34:17.65%:23:1.2287E-2:35:28:11:17:39 0/0:0:0:0:0:28:0%:51:1E0:37:28:13:15:31 0/1:36:8:7:1:20:40%:27:1.638E-3:34:12:9:3:25 0/1:34:7:4:3:32:21.88%:22:5.4182E-3:38:25:15:10:33 0/0:35:6:4:2:30:20%:18:1.186E-2:37:24:15:9:35 0/1:35:12:6:6:52:23.08%:39:1.1939E-4:36:40:25:15:61 0/1:36:8:5:3:34:23.53%:26:2.4562E-3:39:26:13:13:39 0/1:36:11:6:5:39:28.21%:36:2.1547E-4:38:28:16:12:45 0/1:34:10:5:5:34:29.41%:33:4.51E-4:37:24:11:13:40 0/0:37:5:4:1:41:12.2%:35:2.7371E-2:40:35:16:19:45 0/1:37:7:6:1:36:19.44%:22:5.6667E-3:40:29:16:13:41 0/0:37:6:4:2:35:17.14%:25:1.238E-2:41:29:11:18:38 0/0:30:2:0:2:29:6.9%:34:2.4545E-1:40:26:14:12:32 0/0:35:3:1:2:26:11.54%:25:1.1765E-1:38:23:13:10:29 0/1:34:8:2:6:27:29.63%:26:2.1337E-3:40:19:9:10:30 0/1:35:8:5:3:45:17.78%:25:2.7808E-3:38:37:20:17:50 0/0:42:6:4:2:34:17.65%:23:1.2287E-2:39:28:14:14:40 0/1:35:11:7:4:52:21.15%:35:2.7081E-4:39:41:15:26:54 0/1:34:7:3:4:35:20%:22:5.6095E-3:36:28:19:9:41 MTB_anc 3820508 . G GAGCCCGGTGACGATGCGGGCCGCGTAGCGGCCCGAGGAGGAGCCGGGCAATCGGCTT . PASS AC=2;AF=6.667e-03;AN=300;ANN=GAGCCCGGTGACGATGCGGGCCGCGTAGCGGCCCGAGGAGGAGCCGGGCAATCGGCTT|intergenic_region|MODIFIER|Rv3401_Rv3401-Rv3402c_Rv3402c|gene3477-gene3478|intergenic_region|gene3477-gene3478|||n.3820508_3820509insAGCCCGGTGACGATGCGGGCCGCGTAGCGGCCCGAGGAGGAGCCGGGCAATCGGCTT||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:1:0:1:63:1.59%:99:5E-1:49:62:35:27:73 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:27 0/0:0:0:0:0:56:0%:99:1E0:47:56:22:34:63 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:37:1:0:1:43:2.33%:70:5E-1:48:42:19:23:47 0/0:38:1:0:1:35:2.86%:55:5E-1:45:34:15:19:39 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:38 0/0:38:1:0:1:35:2.86%:55:5E-1:44:34:14:20:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:42 0/0:0:0:0:0:11:0%:22:1E0:45:11:10:1:11 0/0:0:0:0:0:52:0%:96:1E0:47:52:29:23:57 0/0:39:1:0:1:31:3.23%:48:5E-1:44:30:12:18:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:30 0/0:39:1:1:0:26:3.85%:38:5E-1:48:25:12:13:29 0/0:39:1:0:1:24:4.17%:34:5E-1:44:23:11:12:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:29 0/0:0:0:0:0:32:0%:59:1E0:40:32:13:19:35 0/0:26:1:1:0:59:1.69%:98:5E-1:45:58:28:30:68 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:23 0/0:0:0:0:0:45:0%:85:1E0:47:45:25:20:51 0/0:38:1:0:1:39:2.56%:62:5E-1:46:38:16:22:45 0/0:0:0:0:0:37:0%:70:1E0:50:37:15:22:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:23:12:37 0/0:34:1:0:1:31:3.23%:48:5E-1:43:30:13:17:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:52 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:47:0%:89:1E0:46:47:21:26:51 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:41 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:10:19:30 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:43 0/0:0:0:0:0:47:0%:89:1E0:48:47:26:21:55 0/0:0:0:0:0:52:0%:96:1E0:48:52:25:27:60 0/0:60:1:1:0:70:1.43%:99:5E-1:51:69:40:29:86 0/0:37:1:0:1:43:2.33%:70:5E-1:45:42:20:22:46 0/0:0:0:0:0:49:0%:93:1E0:49:49:30:19:58 0/0:0:0:0:0:41:0%:78:1E0:47:41:23:18:47 0/0:36:1:1:0:48:2.08%:76:5E-1:45:47:20:27:53 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:54 0/0:0:0:0:0:54:0%:99:1E0:44:54:31:23:59 0/0:0:0:0:0:50:0%:92:1E0:46:50:23:27:57 0/0:0:0:0:0:44:0%:81:1E0:47:44:24:20:49 0/0:0:0:0:0:49:0%:93:1E0:47:49:26:23:58 0/0:36:1:0:1:62:1.61%:99:5E-1:45:61:29:32:68 0/0:31:1:1:0:41:2.44%:66:5E-1:49:40:23:17:48 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:22 0/0:0:0:0:0:62:0%:99:1E0:44:62:37:25:67 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:32 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:42 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:40 0/0:38:1:0:1:53:1.89%:88:5E-1:45:52:26:26:62 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:59 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:59:0%:99:1E0:43:59:29:30:59 0/0:0:0:0:0:53:0%:99:1E0:50:53:35:18:65 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:45 0/0:37:1:1:0:49:2.04%:80:5E-1:46:48:21:27:53 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:53 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:28 0/0:0:0:0:0:56:0%:99:1E0:48:56:25:31:64 0/0:37:2:2:0:79:2.53%:99:2.4841E-1:46:77:46:31:85 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:44 0/0:0:0:0:0:51:0%:97:1E0:50:51:25:26:59 0/0:37:2:2:0:31:6.45%:40:2.459E-1:46:29:17:12:32 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:27 0/0:0:0:0:0:43:0%:82:1E0:47:43:21:22:49 0/0:0:0:0:0:41:0%:78:1E0:52:41:25:16:49 0/0:0:0:0:0:31:0%:59:1E0:51:31:16:15:35 0/0:0:0:0:0:44:0%:81:1E0:45:44:18:26:47 0/0:24:1:0:1:53:1.89%:88:5E-1:43:52:25:27:58 0/0:0:0:0:0:39:0%:74:1E0:45:39:25:14:44 0/0:36:1:0:1:36:2.78%:55:5E-1:47:35:18:17:41 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:38 0/0:49:2:1:1:39:5.13%:54:2.4675E-1:44:37:19:18:43 0/0:37:1:0:1:38:2.63%:58:5E-1:47:37:22:15:43 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:45 0/0:37:3:3:0:63:4.76%:86:1.22E-1:46:60:35:25:69 0/0:37:1:0:1:45:2.22%:73:5E-1:47:44:23:21:51 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:41 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:48 0/0:60:1:1:0:55:1.82%:91:5E-1:45:54:22:32:60 0/0:0:0:0:0:50:0%:92:1E0:45:50:22:28:54 0/0:0:0:0:0:20:0%:36:1E0:49:20:9:11:23 0/0:0:0:0:0:43:0%:82:1E0:48:43:20:23:45 0/0:0:0:0:0:38:0%:70:1E0:50:38:19:19:43 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:48 0/0:0:0:0:0:32:0%:59:1E0:50:32:20:12:39 0/0:0:0:0:0:65:0%:99:1E0:42:65:24:41:70 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:40 0/0:0:0:0:0:58:0%:99:1E0:44:58:31:27:62 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:29 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:41 0/0:38:1:0:1:41:2.44%:66:5E-1:44:40:19:21:45 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:41 0/0:39:1:0:1:34:2.94%:51:5E-1:42:33:14:19:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:42 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:45 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:34 0/0:38:2:1:1:39:5.13%:54:2.4675E-1:48:37:13:24:43 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:53 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:34 0/0:0:0:0:0:50:0%:92:1E0:46:50:29:21:60 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:42 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:33 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:54 0/0:37:1:1:0:41:2.44%:66:5E-1:38:40:26:14:43 0/0:0:0:0:0:63:0%:99:1E0:39:63:34:29:67 0/0:0:0:0:0:47:0%:89:1E0:40:47:25:22:49 0/0:0:0:0:0:41:0%:78:1E0:47:41:24:17:45 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:27 0/0:0:0:0:0:58:0%:99:1E0:48:58:32:26:67 0/0:34:1:0:1:65:1.54%:99:5E-1:44:64:38:26:69 0/0:38:1:1:0:45:2.22%:73:5E-1:43:44:21:23:49 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:32 0/0:34:2:0:2:47:4.26%:67:2.4731E-1:43:45:24:21:50 0/1:41:8:6:2:32:25%:26:2.3332E-3:42:23:11:12:37 0/1:37:8:7:1:50:16%:25:2.8033E-3:40:38:14:24:53 0/0:0:0:0:0:42:0%:77:1E0:38:42:26:16:50 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:36 0/0:38:1:0:1:46:2.17%:73:5E-1:41:45:26:19:48 0/0:38:1:1:0:45:2.22%:73:5E-1:40:44:22:22:47 0/0:39:1:0:1:45:2.22%:73:5E-1:39:44:23:21:49 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:38 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:35 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:40 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:38 0/0:50:1:1:0:29:3.45%:45:5E-1:44:28:17:11:34 0/0:37:1:0:1:72:1.39%:99:5E-1:40:71:42:29:76 0/0:36:1:0:1:41:2.44%:66:5E-1:42:40:17:23:41 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:54 0/0:36:1:1:0:52:1.92%:83:5E-1:41:51:23:28:57 0/0:37:2:0:2:43:4.65%:60:2.4706E-1:44:41:22:19:47 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:38 0/0:0:0:0:0:43:0%:82:1E0:47:43:25:18:48 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:43 0/0:37:1:0:1:36:2.78%:55:5E-1:45:35:17:18:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:38 0/0:0:0:0:0:51:0%:97:1E0:49:51:31:20:62 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:59 0/0:37:1:1:0:48:2.08%:76:5E-1:41:47:18:29:52 MTB_anc 3820545 . A G . PASS AC=136;AF=0.456;AN=298;ANN=G|intergenic_region|MODIFIER|Rv3401_Rv3401-Rv3402c_Rv3402c|gene3477-gene3478|intergenic_region|gene3477-gene3478|||n.3820545A>G||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:41:18:10:8:60:30%:60:8.5119E-7:40:42:19:23:69 0/1:41:7:5:2:22:31.82%:23:4.4505E-3:45:15:6:9:25 0/1:41:22:7:15:55:40%:77:1.7076E-8:44:33:13:20:67 0/1:40:7:3:4:22:31.82%:23:4.4505E-3:42:15:8:7:26 0/1:48:9:4:5:19:47.37%:32:5.667E-4:40:10:8:2:21 0/1:36:8:4:4:28:28.57%:26:2.188E-3:44:20:9:11:32 0/1:42:8:3:5:33:24.24%:26:2.4173E-3:49:25:13:12:36 0/1:44:12:5:7:36:33.33%:40:8.1472E-5:40:24:9:15:39 0/0:41:6:3:3:22:27.27%:9:1.057E-2:44:16:7:9:23 0/1:41:16:9:7:36:44.44%:57:1.7753E-6:47:20:10:10:37 0/1:39:17:10:7:33:51.52%:63:4.6376E-7:44:16:5:11:34 0/0:31:6:4:2:32:18.75%:20:1.2087E-2:37:26:6:20:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:45:18:9:9:51:35.29%:62:6.1577E-7:43:33:17:16:56 0/1:39:9:3:6:31:29.03%:30:9.9376E-4:40:22:5:17:34 0/0:39:6:4:2:26:23.08%:13:1.1309E-2:43:20:12:8:28 0/1:44:12:5:7:20:60%:46:2.2548E-5:36:8:4:4:23 0/1:36:7:2:5:23:30.43%:23:4.5803E-3:39:16:11:5:23 0/1:41:7:0:7:24:29.17%:23:4.7006E-3:38:17:11:6:25 0/1:36:10:7:3:24:41.67%:35:2.9985E-4:46:14:4:10:27 0/1:37:10:3:7:26:38.46%:34:3.3576E-4:37:16:8:8:28 0/1:42:18:9:9:57:31.58%:61:7.7462E-7:39:39:16:23:66 0/1:37:7:6:1:24:29.17%:23:4.7006E-3:39:17:7:10:27 0/1:41:16:9:7:46:34.78%:55:3.1446E-6:46:30:16:14:50 0/1:38:16:6:10:38:42.11%:56:2.0535E-6:39:22:8:14:48 0/1:44:14:8:6:34:41.18%:49:1.1295E-5:48:20:7:13:37 0/0:38:5:3:2:33:15.15%:27:2.6557E-2:38:28:18:10:37 0/1:41:14:9:5:27:51.85%:52:6.1806E-6:44:13:4:9:30 0/1:38:13:9:4:42:30.95%:43:4.0777E-5:39:29:12:17:46 0/1:39:17:7:10:34:50%:62:5.1914E-7:39:17:10:7:38 0/1:42:16:6:10:49:32.65%:54:3.5325E-6:39:33:11:22:54 0/1:44:13:5:8:35:37.14%:45:3.1103E-5:42:22:16:6:39 0/1:38:11:9:2:30:36.67%:37:1.594E-4:45:19:10:9:33 0/1:36:10:4:6:30:33.33%:33:3.9851E-4:39:20:9:11:31 0/1:43:12:3:9:35:34.29%:41:7.8434E-5:45:23:13:10:40 0/1:44:14:8:6:52:26.92%:46:2.2247E-5:41:38:13:25:60 0/1:41:16:12:4:52:30.77%:54:3.905E-6:38:36:13:23:62 0/1:43:27:19:8:65:41.54%:96:2.4148E-10:43:38:18:20:83 0/1:46:15:8:7:39:38.46%:52:5.7558E-6:41:24:14:10:42 0/1:44:19:11:8:51:37.25%:66:2.2975E-7:45:31:16:15:59 0/1:40:13:9:4:39:33.33%:44:3.6837E-5:39:26:9:17:47 0/1:42:11:5:6:45:24.44%:36:2.4398E-4:42:34:12:22:52 0/1:38:13:4:9:29:44.83%:46:2.1506E-5:36:16:9:7:31 0/1:38:20:9:11:45:44.44%:72:6.2178E-8:38:25:10:15:51 0/1:38:22:11:11:50:44%:79:1.2104E-8:40:28:19:9:54 0/1:35:14:8:6:46:30.43%:47:1.9039E-5:41:32:12:20:52 0/1:40:15:9:6:40:37.5%:52:6.0618E-6:47:25:9:16:48 0/1:44:16:6:10:45:35.56%:55:3.0122E-6:41:29:14:15:54 0/1:38:26:13:13:60:43.33%:93:4.5813E-10:40:34:12:22:64 0/1:41:8:5:3:39:20.51%:25:2.624E-3:45:31:13:18:46 0/1:37:7:2:5:16:43.75%:24:3.3988E-3:50:9:7:2:17 0/1:40:23:12:11:61:37.7%:80:9.1717E-9:42:38:18:20:63 0/1:38:14:4:10:32:45.16%:50:9.1194E-6:38:17:6:11:34 0/1:42:15:6:9:34:44.12%:53:4.1835E-6:43:19:10:9:38 0/1:43:11:8:3:34:32.35%:37:1.8662E-4:40:23:12:11:40 0/1:46:9:4:5:52:17.31%:28:1.3391E-3:40:43:18:25:61 0/1:39:24:13:11:42:57.14%:92:5.5097E-10:36:18:7:11:50 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/1:39:25:13:12:58:43.1%:89:1.0786E-9:43:33:17:16:61 0/1:47:15:10:5:51:29.41%:50:9.1412E-6:42:36:18:18:64 0/1:45:14:7:7:36:38.89%:48:1.2704E-5:43:22:8:14:40 0/1:41:20:9:11:45:44.44%:72:6.2178E-8:41:25:11:14:51 0/1:39:16:12:4:42:38.1%:55:2.607E-6:39:26:13:13:46 0/0:37:6:4:2:23:26.09%:11:1.0777E-2:41:17:8:9:25 0/1:41:21:6:15:55:38.18%:73:4.4698E-8:44:34:12:22:63 0/1:41:27:15:12:70:38.57%:94:3.2861E-10:44:43:25:18:75 0/0:66:2:2:0:33:6.06%:44:2.4615E-1:39:31:12:19:40 0/1:46:18:9:9:51:35.29%:62:6.1577E-7:44:33:14:19:61 0/1:48:12:7:5:32:37.5%:41:6.8751E-5:45:20:11:9:34 0/1:43:10:3:7:19:52.63%:37:1.9541E-4:50:9:5:4:24 0/1:49:15:8:7:42:35.71%:51:6.6622E-6:42:27:8:19:49 0/1:46:15:11:4:39:38.46%:52:5.7558E-6:50:24:10:14:46 0/1:51:8:5:3:28:28.57%:26:2.188E-3:44:20:6:14:31 0/1:44:16:6:10:42:38.1%:55:2.607E-6:47:26:12:14:44 0/1:42:20:8:12:53:37.74%:69:1.0405E-7:40:33:15:18:58 0/1:40:14:9:5:39:35.9%:48:1.4735E-5:44:25:16:9:42 0/1:38:16:8:8:34:47.06%:58:1.4997E-6:41:18:4:14:43 0/1:43:11:5:6:27:40.74%:38:1.362E-4:37:16:9:7:33 0/1:38:17:8:9:37:45.95%:61:6.9312E-7:40:20:8:12:39 0/1:43:15:7:8:33:45.45%:54:3.5464E-6:40:17:7:10:41 0/1:41:18:10:8:37:48.65%:66:2.432E-7:39:19:7:12:42 0/1:42:24:13:11:60:40%:85:3.1153E-9:41:35:18:17:68 0/1:40:10:5:5:41:24.39%:32:5.2405E-4:40:31:11:20:48 0/1:44:16:7:9:39:41.03%:56:2.1927E-6:44:23:11:12:40 0/1:43:11:4:7:35:31.43%:37:1.9282E-4:41:24:13:11:38 0/1:43:19:10:9:52:36.54%:65:2.5408E-7:40:33:13:20:60 0/1:39:20:7:13:49:40.82%:70:8.2643E-8:42:29:12:17:56 0/1:37:8:5:3:26:30.77%:26:2.076E-3:42:18:6:12:29 0/1:43:21:8:13:44:47.73%:76:2.0219E-8:44:23:10:13:47 0/1:44:16:7:9:31:51.61%:59:1.0995E-6:45:15:9:6:35 0/1:41:17:7:10:42:40.48%:60:9.9678E-7:47:25:13:12:48 0/1:42:18:10:8:30:60%:70:9.3503E-8:44:12:5:7:34 0/1:40:19:6:13:66:28.79%:63:4.1996E-7:38:47:13:34:71 0/1:37:11:5:6:38:28.95%:36:2.1011E-4:41:27:16:11:41 0/1:40:13:7:6:50:26%:43:4.9906E-5:42:37:20:17:57 0/1:35:7:5:2:30:23.33%:22:5.2713E-3:41:23:11:12:31 0/0:33:5:3:2:22:22.73%:12:2.4248E-2:38:17:7:10:27 0/1:37:19:10:9:37:51.35%:70:8.2514E-8:43:18:12:6:38 0/1:37:11:5:6:37:29.73%:36:2.0455E-4:39:26:12:14:41 0/1:43:12:4:8:40:30%:40:9.2733E-5:37:28:14:14:43 0/1:40:8:3:5:32:25%:26:2.3764E-3:44:24:12:12:34 0/1:38:13:5:8:35:37.14%:45:3.1103E-5:40:22:11:11:40 0/1:36:10:5:5:35:28.57%:33:4.6276E-4:41:25:15:10:40 0/1:37:9:7:2:20:45%:32:6.1425E-4:43:11:5:6:21 0/1:36:10:5:5:27:37.04%:34:3.5253E-4:39:17:10:7:29 0/1:51:8:2:6:39:20.51%:25:2.624E-3:43:31:17:14:45 0/1:38:10:5:5:32:31.25%:33:4.259E-4:39:22:12:10:34 0/1:38:12:4:8:35:34.29%:41:7.8434E-5:44:23:7:16:38 0/1:45:15:9:6:41:36.59%:51:6.364E-6:38:26:14:12:46 0/1:39:10:6:4:31:32.26%:33:4.1251E-4:41:21:11:10:33 0/1:39:15:10:5:44:34.09%:51:7.2456E-6:38:29:12:17:51 0/1:41:9:6:3:29:31.03%:30:9.4048E-4:39:20:7:13:33 0/1:36:8:1:7:30:26.67%:26:2.2875E-3:35:22:9:13:31 0/1:40:19:6:13:52:36.54%:65:2.5408E-7:40:33:17:16:56 0/1:37:12:6:6:38:31.58%:40:8.7276E-5:38:26:19:7:40 0/1:36:16:14:2:46:34.78%:55:3.1446E-6:40:30:13:17:54 0/1:36:12:8:4:46:26.09%:39:1.0724E-4:39:34:13:21:49 0/1:41:11:8:3:35:31.43%:37:1.9282E-4:44:24:11:13:41 0/1:38:8:2:6:29:27.59%:26:2.2392E-3:37:21:12:9:32 0/1:35:14:9:5:53:26.42%:46:2.2741E-5:41:39:16:23:70 0/1:43:22:10:12:61:36.07%:76:2.3517E-8:39:39:24:15:69 0/1:41:16:9:7:45:35.56%:55:3.0122E-6:41:29:9:20:49 0/1:39:11:6:5:35:31.43%:37:1.9282E-4:38:24:12:12:39 0/1:36:12:7:5:42:28.57%:40:9.7866E-5:38:30:14:16:49 0/0:32:1:1:0:24:4.17%:34:5E-1:39:23:11:12:24 0/0:37:1:1:0:31:3.23%:48:5E-1:39:30:11:19:34 0/1:37:14:12:2:42:33.33%:47:1.6656E-5:35:28:10:18:45 0/1:36:7:3:4:29:24.14%:22:5.1909E-3:41:22:15:7:33 0/1:35:9:6:3:40:22.5%:29:1.1791E-3:37:31:12:19:43 0/1:36:10:4:6:34:29.41%:33:4.51E-4:39:24:11:13:42 0/1:36:10:6:4:40:25%:32:5.1483E-4:39:30:10:20:46 0/1:36:7:2:5:32:21.88%:22:5.4182E-3:35:25:11:14:39 0/0:0:0:0:0:32:0%:59:1E0:36:32:16:16:33 0/0:37:5:3:2:34:14.71%:27:2.6693E-2:38:29:15:14:37 0/1:35:11:10:1:33:33.33%:37:1.8019E-4:38:22:13:9:36 0/0:41:5:3:2:30:16.67%:21:2.6093E-2:37:25:8:17:35 0/1:36:30:19:11:75:40%:99:2.4283E-11:38:45:20:25:78 0/1:37:12:6:6:35:34.29%:41:7.8434E-5:39:23:8:15:40 0/1:41:17:6:11:45:37.78%:59:1.1805E-6:41:28:12:16:48 0/1:38:15:8:7:45:33.33%:51:7.5306E-6:40:30:14:16:50 0/1:37:13:4:9:34:38.24%:45:2.9583E-5:36:21:10:11:40 0/1:41:7:1:6:30:23.33%:22:5.2713E-3:42:23:13:10:34 0/1:38:15:9:6:42:35.71%:51:6.6622E-6:41:27:12:15:47 0/1:46:17:6:11:40:42.5%:60:8.743E-7:39:23:13:10:43 0/1:40:17:7:10:36:47.22%:61:6.3405E-7:41:19:10:9:40 0/1:41:12:6:6:34:35.29%:41:7.5302E-5:43:22:8:14:37 0/1:37:11:7:4:32:34.38%:37:1.7351E-4:41:21:8:13:36 0/1:40:16:11:5:50:32%:54:3.6584E-6:40:34:18:16:64 0/1:38:13:7:6:44:29.55%:43:4.324E-5:39:31:16:15:46 0/1:35:19:9:10:38:50%:70:9.2415E-8:42:19:7:12:40 MTB_anc 3825469 . T C . PASS AC=16;AF=0.053;AN=300;ANN=C|missense_variant|MODERATE|Rv3406_Rv3406|gene3482|transcript|Transcript_gene3482|Coding|1/1|c.140T>C|p.Phe47Ser|140/888|140/888|47/295||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3825469T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3825469T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:52 0/0:0:0:0:0:18:0%:32:1E0:52:18:11:7:18 0/0:0:0:0:0:59:0%:99:1E0:47:59:29:30:60 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:0:0:0:0:30:0%:55:1E0:46:30:21:9:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:23:0%:44:1E0:52:23:13:10:24 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:21:0%:40:1E0:50:21:11:10:21 0/0:0:0:0:0:48:0%:89:1E0:46:48:24:24:48 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:25 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:34:0%:62:1E0:46:34:23:11:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:51 0/0:0:0:0:0:23:0%:44:1E0:50:23:9:14:23 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:21 0/0:0:0:0:0:39:0%:74:1E0:47:39:22:17:39 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:35:0%:67:1E0:49:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:39 0/0:0:0:0:0:58:0%:99:1E0:45:58:21:37:58 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:42 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:48 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:46 0/0:0:0:0:0:58:0%:99:1E0:44:58:28:30:58 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:33:0%:63:1E0:48:33:18:15:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:48:0%:89:1E0:40:48:24:24:49 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:49 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:43 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:19 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:0:0:0:0:20:0%:36:1E0:49:20:6:14:20 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:29 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:47 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:41 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:47:0%:89:1E0:45:47:26:21:47 0/0:0:0:0:0:49:0%:93:1E0:40:49:22:27:50 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:20:16:37:97.3%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:21:0%:40:1E0:50:21:10:11:21 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:27 0/0:0:0:0:0:45:0%:85:1E0:47:45:21:24:46 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:24:0%:44:1E0:52:24:13:11:24 0/0:0:0:0:0:30:0%:55:1E0:51:30:20:10:30 0/0:0:0:0:0:50:0%:92:1E0:45:50:26:24:54 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:25:0%:48:1E0:52:25:18:7:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:41 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:31 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:51:0%:97:1E0:43:51:26:25:53 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:27 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:21 0/0:0:0:0:0:40:0%:74:1E0:49:40:16:24:40 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:22 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:40 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:45 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:13:21:35 0/0:0:0:0:0:54:0%:99:1E0:42:54:36:18:57 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:47 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:22:11:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:50:32:16:16:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:20 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:38 0/0:0:0:0:0:52:0%:96:1E0:40:52:24:28:54 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:37 0/0:0:0:0:0:38:0%:70:1E0:46:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:54 0/0:0:0:0:0:61:0%:99:1E0:43:61:18:43:63 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:53 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:39 0/0:0:0:0:0:55:0%:99:1E0:39:55:27:28:58 0/0:0:0:0:0:46:0%:85:1E0:39:46:19:27:46 0/0:0:0:0:0:59:0%:99:1E0:40:59:31:28:61 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:44 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:42 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:57:0%:99:1E0:39:57:26:31:57 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:55:0%:99:1E0:43:55:30:25:57 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:52 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:52:0%:96:1E0:44:52:26:26:52 0/0:0:0:0:0:59:0%:99:1E0:41:59:35:24:62 0/0:0:0:0:0:44:0%:81:1E0:43:44:31:13:44 MTB_anc 3828627 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|choD_Rv3409c|gene3485|transcript|Transcript_gene3485|Coding|1/1|c.101A>C|p.Glu34Ala|101/1737|101/1737|34/578||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3828627T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3828627T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:43 0/0:0:0:0:0:21:0%:40:1E0:52:21:11:10:22 0/0:0:0:0:0:50:0%:92:1E0:48:50:22:28:52 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:52:29:13:16:32 0/0:0:0:0:0:33:0%:63:1E0:51:33:18:15:33 0/0:0:0:0:0:17:0%:33:1E0:43:17:11:6:18 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:38 0/0:0:0:0:0:17:0%:33:1E0:49:17:7:10:17 0/0:0:0:0:0:50:0%:92:1E0:46:50:22:28:51 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:27 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:20 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:29:0%:55:1E0:50:29:15:14:30 0/0:0:0:0:0:30:0%:55:1E0:50:30:16:14:31 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:29 0/0:0:0:0:0:60:0%:99:1E0:43:60:25:35:60 0/0:0:0:0:0:35:0%:67:1E0:52:35:15:20:36 0/0:0:0:0:0:52:0%:96:1E0:46:52:29:23:52 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:33 0/0:0:0:0:0:26:0%:47:1E0:48:26:6:20:26 0/0:0:0:0:0:22:0%:40:1E0:46:22:15:7:22 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:14 0/0:0:0:0:0:22:0%:40:1E0:39:22:15:7:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:28 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:24 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:6:19:27 0/0:0:0:0:0:36:0%:66:1E0:52:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:42:0%:77:1E0:47:42:23:19:43 0/0:0:0:0:0:60:0%:99:1E0:47:60:23:37:62 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:48 0/0:0:0:0:0:46:0%:85:1E0:46:46:22:24:47 0/0:0:0:0:0:33:0%:63:1E0:43:33:23:10:34 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:44 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:42:0%:77:1E0:49:42:24:18:45 0/0:0:0:0:0:17:0%:33:1E0:53:17:11:6:18 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:51 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:26 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:31 0/0:0:0:0:0:49:0%:93:1E0:43:49:26:23:49 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:44 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:20:18:38 0/0:0:0:0:0:54:0%:99:1E0:46:54:31:23:56 0/0:0:0:0:0:56:0%:99:1E0:46:56:26:30:58 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:31 0/0:0:0:0:0:41:0%:78:1E0:49:41:25:16:42 0/0:0:0:0:0:11:0%:22:1E0:46:11:6:5:12 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:30 0/0:0:0:0:0:29:0%:55:1E0:53:29:8:21:29 0/0:0:0:0:0:20:0%:36:1E0:49:20:12:8:22 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 0/0:0:0:0:0:29:0%:55:1E0:45:29:20:9:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:23 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:26 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:26:0%:47:1E0:48:26:9:17:26 0/0:0:0:0:0:36:0%:66:1E0:50:36:21:15:36 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:22 0/0:0:0:0:0:47:0%:89:1E0:44:47:22:25:47 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:28 0/0:0:0:0:0:47:0%:89:1E0:45:47:27:20:48 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:28 0/0:0:0:0:0:35:0%:67:1E0:48:35:19:16:35 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:45 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:33 0/0:0:0:0:0:43:0%:82:1E0:48:43:21:22:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:38 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:13:27:43 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:36 0/0:0:0:0:0:23:0%:44:1E0:44:23:8:15:23 0/0:0:0:0:0:49:0%:93:1E0:44:49:21:28:50 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:52 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:45 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:36 0/0:0:0:0:0:44:0%:81:1E0:39:44:17:27:46 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:8:23:34 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:32 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:62:0%:99:1E0:40:62:33:29:64 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:29 0/0:0:0:0:0:48:0%:89:1E0:41:48:25:23:48 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:11:22:35 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:36 0/0:0:0:0:0:22:0%:40:1E0:49:22:7:15:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:40 0/0:0:0:0:0:55:0%:99:1E0:48:55:25:30:55 0/0:0:0:0:0:61:0%:99:1E0:44:61:28:33:61 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 MTB_anc 3830695 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|guaB2_Rv3411c|gene3487|transcript|Transcript_gene3487|Coding|1/1|c.825C>T|p.Ala275Ala|825/1590|825/1590|275/529||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.3830695G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3830695G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:51:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:15:15:31:96.77%:99:6.8754E-17:33:1:1:0:32 1/1:50:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:54:34:20:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:60:26:34:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:53:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 3835079 . GA G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|frameshift_variant|HIGH|whiB3_Rv3416|gene3492|transcript|Transcript_gene3492|Coding|1/1|c.189delA|p.Ser64fs|189/309|189/309|63/102||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3835080delA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3835080delA||||||;HOM=0;LOF=(whiB3_Rv3416|gene3492|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:46:50:25:25:50 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:63:0%:99:1E0:48:63:31:32:63 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:42:0%:77:1E0:50:42:18:24:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:38:0%:70:1E0:49:38:17:21:38 0/0:0:0:0:0:25:0%:48:1E0:50:25:17:8:25 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:54:0%:99:1E0:42:54:26:28:54 0/0:0:0:0:0:24:0%:44:1E0:47:24:7:17:25 0/0:0:0:0:0:51:0%:97:1E0:47:51:27:24:51 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:25:0%:48:1E0:49:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:22 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:34 0/0:0:0:0:0:24:0%:44:1E0:49:24:8:16:24 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:37:0%:70:1E0:49:37:24:13:38 0/0:0:0:0:0:44:0%:81:1E0:41:44:28:16:44 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:62:0%:99:1E0:44:62:33:29:62 0/0:34:1:1:0:39:2.56%:62:5E-1:46:38:20:18:40 0/0:38:1:0:1:44:2.27%:69:5E-1:46:43:21:22:45 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:12:24:36 0/0:0:0:0:0:19:0%:37:1E0:43:19:13:6:19 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:38:0%:70:1E0:49:38:21:17:38 0/0:0:0:0:0:54:0%:99:1E0:49:54:29:25:54 0/0:0:0:0:0:19:0%:37:1E0:53:19:8:11:19 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:47 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:43 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:45 0/0:0:0:0:0:45:0%:85:1E0:46:45:27:18:45 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:63:0%:99:1E0:42:63:33:30:63 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:36 0/1:49:19:12:7:24:79.17%:84:3.6826E-9:49:5:4:1:24 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 0/0:0:0:0:0:44:0%:81:1E0:52:44:18:26:44 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:39:0%:74:1E0:43:39:13:26:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:37:0%:70:1E0:45:37:17:20:37 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:45 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:11:24:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:46 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:42 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:45 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:47:0%:89:1E0:47:47:26:21:47 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:45:0%:85:1E0:42:45:24:21:46 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:56:0%:99:1E0:42:56:31:25:56 0/0:0:0:0:0:29:0%:55:1E0:44:29:20:9:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:60:1:1:0:44:2.27%:69:5E-1:40:43:23:20:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:38 0/0:0:0:0:0:48:0%:89:1E0:44:48:28:20:50 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:40 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:23:0%:44:1E0:35:23:16:7:23 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:46:0%:85:1E0:39:46:23:23:49 0/0:0:0:0:0:58:0%:99:1E0:38:58:34:24:58 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:68:0%:99:1E0:42:68:31:37:68 0/0:0:0:0:0:44:0%:81:1E0:41:44:22:22:44 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:29 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:45 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:52 0/0:0:0:0:0:47:0%:89:1E0:38:47:31:16:49 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:32 0/0:0:0:0:0:30:0%:55:1E0:40:30:19:11:32 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:48 0/0:0:0:0:0:44:0%:81:1E0:38:44:27:17:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:63:0%:99:1E0:39:63:26:37:63 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:52 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:49 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:49 0/0:0:0:0:0:46:0%:85:1E0:47:46:25:21:48 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:21:0%:40:1E0:38:21:15:6:21 0/0:37:1:1:0:35:2.86%:55:5E-1:42:34:19:15:35 0/0:0:0:0:0:49:0%:93:1E0:41:49:30:19:50 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:44 0/0:0:0:0:0:52:0%:96:1E0:42:52:26:26:52 0/0:0:0:0:0:47:0%:89:1E0:40:47:30:17:47 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:49 MTB_anc 3836149 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|groEL1_Rv3417c|gene3493|transcript|Transcript_gene3493|Coding|1/1|c.743T>C|p.Val248Ala|743/1620|743/1620|248/539||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3836149A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3836149A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:39:47:17:30:47 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 0/0:0:0:0:0:54:0%:99:1E0:42:54:22:32:54 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:10 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:22 0/0:0:0:0:0:26:0%:47:1E0:42:26:8:18:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:39:35:14:21:36 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:48:0%:89:1E0:41:48:17:31:49 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:18 0/0:0:0:0:0:28:0%:51:1E0:39:28:9:19:29 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 0/0:0:0:0:0:19:0%:37:1E0:42:19:4:15:19 0/0:0:0:0:0:22:0%:40:1E0:38:22:8:14:22 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:48:0%:89:1E0:39:48:22:26:50 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:11:27:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:7:15:22 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:30 0/0:0:0:0:0:21:0%:40:1E0:50:21:6:15:21 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:27 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:20:0%:36:1E0:41:20:6:14:20 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:28 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:33 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:58:0%:99:1E0:43:58:26:32:58 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:39 0/0:0:0:0:0:43:0%:82:1E0:40:43:17:26:43 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:25 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:45 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:39:0%:74:1E0:40:39:14:25:39 0/0:0:0:0:0:12:0%:21:1E0:46:12:5:7:12 0/0:0:0:0:0:36:0%:66:1E0:38:36:13:23:36 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:8:19:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:26 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:11:15:28 0/0:0:0:0:0:14:0%:25:1E0:41:14:8:6:15 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:10:21:31 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:23 0/0:0:0:0:0:45:0%:85:1E0:41:45:16:29:46 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:17 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:41 0/0:0:0:0:0:13:0%:25:1E0:41:13:7:6:13 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:36 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:34 0/0:0:0:0:0:46:0%:85:1E0:41:46:16:30:46 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:36 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:26 0/0:0:0:0:0:43:0%:82:1E0:41:43:14:29:44 0/0:0:0:0:0:19:0%:37:1E0:38:19:4:15:20 0/0:0:0:0:0:36:0%:66:1E0:41:36:12:24:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:9:19:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:11:20:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:9:27:36 0/0:0:0:0:0:23:0%:44:1E0:39:23:9:14:23 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:6:19:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:7:15:23 0/0:0:0:0:0:44:0%:81:1E0:37:44:13:31:45 0/0:0:0:0:0:23:0%:44:1E0:37:23:16:7:23 0/0:0:0:0:0:51:0%:97:1E0:41:51:22:29:52 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:30 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:33 0/0:0:0:0:0:18:0%:32:1E0:39:18:11:7:18 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:32 0/0:0:0:0:0:22:0%:40:1E0:39:22:12:10:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:18 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:27 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:24:0%:44:1E0:39:24:6:18:24 0/0:0:0:0:0:30:0%:55:1E0:39:30:10:20:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:12:24:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:12:28:42 0/0:0:0:0:0:32:0%:59:1E0:36:32:9:23:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:8:19:28 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:28 0/0:0:0:0:0:52:0%:96:1E0:40:52:26:26:53 0/0:0:0:0:0:51:0%:97:1E0:39:51:21:30:51 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:15 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:23 0/0:0:0:0:0:50:0%:92:1E0:38:50:17:33:51 0/0:0:0:0:0:32:0%:59:1E0:39:32:10:22:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:9:23:34 0/0:0:0:0:0:39:0%:74:1E0:38:39:15:24:40 0/0:0:0:0:0:47:0%:89:1E0:39:47:17:30:49 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:30 0/0:0:0:0:0:36:0%:66:1E0:38:36:12:24:39 0/0:0:0:0:0:33:0%:63:1E0:40:33:4:29:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:12:21:34 0/0:0:0:0:0:36:0%:66:1E0:37:36:15:21:37 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:27:0%:52:1E0:39:27:7:20:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:13:25:39 0/0:0:0:0:0:36:0%:66:1E0:41:36:11:25:36 0/0:0:0:0:0:29:0%:55:1E0:40:29:9:20:29 0/0:0:0:0:0:39:0%:74:1E0:38:39:14:25:39 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:32 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 0/0:0:0:0:0:24:0%:44:1E0:39:24:9:15:25 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 0/0:0:0:0:0:43:0%:82:1E0:42:43:10:33:43 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:25 MTB_anc 3841652 . T A . PASS AC=115;AF=0.383;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cycloserine|||n.3841652T>A||||||,A|intergenic_region|MODIFIER|alr_Rv3423c-Rv3424c_Rv3424c|gene3499-gene3500|intergenic_region|gene3499-gene3500|||n.3841652T>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:39:10:4:6:45:22.22%:32:5.5766E-4:43:35:19:16:45 0/0:44:3:1:2:35:8.57%:40:1.1957E-1:45:32:14:18:36 0/1:40:14:5:9:64:21.88%:45:2.7518E-5:45:50:26:24:65 0/0:38:6:3:3:35:17.14%:25:1.238E-2:45:29:14:15:35 0/1:41:11:2:9:44:25%:36:2.3962E-4:43:33:18:15:46 0/0:47:5:4:1:31:16.13%:24:2.6257E-2:42:26:15:11:31 0/1:46:10:6:4:53:18.87%:32:6.1215E-4:46:43:21:22:53 0/0:43:4:1:3:27:14.81%:23:5.5494E-2:48:23:9:14:28 0/0:51:5:2:3:43:11.63%:41:2.764E-2:50:38:23:15:43 0/0:44:6:0:6:25:24%:14:1.1145E-2:44:19:8:11:26 0/1:41:9:6:3:50:18%:28:1.3171E-3:47:41:21:20:50 0/0:37:4:2:2:38:10.53%:37:5.7534E-2:44:34:18:16:38 0/0:40:5:2:3:33:15.15%:27:2.6557E-2:48:28:15:13:34 0/1:43:11:8:3:50:22%:35:2.6374E-4:45:39:17:22:50 0/0:52:6:2:4:28:21.43%:16:1.1603E-2:50:22:12:10:29 0/1:37:10:5:5:33:30.3%:33:4.3872E-4:43:23:11:12:34 0/1:46:8:3:5:35:22.86%:26:2.4931E-3:49:27:15:12:35 0/1:37:7:5:2:26:26.92%:23:4.9169E-3:48:19:14:5:26 0/1:43:7:3:4:25:28%:23:4.8126E-3:41:18:9:9:25 0/0:52:6:3:3:34:17.65%:23:1.2287E-2:46:28:13:15:34 0/0:41:6:2:4:28:21.43%:16:1.1603E-2:41:22:13:9:28 0/1:36:15:12:3:60:25%:49:1.1245E-5:42:45:21:24:65 0/1:44:10:5:5:42:23.81%:32:5.3293E-4:47:32:18:14:43 0/1:42:12:8:4:47:25.53%:39:1.0942E-4:45:35:16:19:48 0/1:41:11:3:8:46:23.91%:36:2.4819E-4:42:35:17:18:46 0/1:43:8:3:5:38:21.05%:25:2.5935E-3:50:30:12:18:40 0/1:43:11:4:7:30:36.67%:37:1.594E-4:47:19:8:11:31 0/0:49:4:2:2:33:12.12%:32:5.6777E-2:48:29:17:12:33 0/1:46:11:7:4:36:30.56%:37:1.9879E-4:48:25:12:13:38 0/0:42:5:3:2:24:20.83%:14:2.4823E-2:42:19:11:8:27 0/1:40:8:1:7:33:24.24%:26:2.4173E-3:46:25:14:11:34 0/0:36:4:2:2:20:20%:13:5.3015E-2:42:16:6:10:22 0/1:45:12:6:6:53:22.64%:39:1.2122E-4:47:41:21:20:54 0/0:40:6:4:2:32:18.75%:20:1.2087E-2:43:26:16:10:32 0/1:46:8:2:6:54:14.81%:25:2.9557E-3:47:46:23:23:54 0/1:39:12:6:6:51:23.53%:39:1.1751E-4:41:39:16:23:52 0/1:41:10:4:6:40:25%:32:5.1483E-4:44:30:21:9:42 0/1:44:18:9:9:78:23.08%:58:1.2601E-6:45:60:31:29:82 0/1:43:15:8:7:62:24.19%:49:1.1665E-5:44:47:22:25:63 0/1:48:11:6:5:50:22%:35:2.6374E-4:44:39:19:20:50 0/0:41:5:3:2:37:13.51%:32:2.706E-2:39:32:13:19:38 0/1:40:9:4:5:58:15.52%:28:1.3968E-3:44:49:27:22:58 0/1:42:11:6:5:35:31.43%:37:1.9282E-4:50:24:18:6:35 0/1:40:8:5:3:41:19.51%:25:2.6808E-3:42:33:11:22:41 0/1:43:11:5:6:27:40.74%:38:1.362E-4:46:16:8:8:27 0/1:41:12:7:5:46:26.09%:39:1.0724E-4:41:34:16:18:47 0/1:43:8:4:4:31:25.81%:26:2.3332E-3:42:23:12:11:31 0/1:43:11:5:6:52:21.15%:35:2.7081E-4:41:41:16:25:53 0/1:40:15:6:9:45:33.33%:51:7.5306E-6:42:30:16:14:46 0/1:41:12:7:5:51:23.53%:39:1.1751E-4:47:39:19:20:51 0/1:41:8:4:4:26:30.77%:26:2.076E-3:54:18:8:10:26 0/1:39:10:6:4:44:22.73%:32:5.4972E-4:43:34:17:17:45 0/1:44:8:4:4:30:26.67%:26:2.2875E-3:47:22:10:12:31 0/1:46:10:6:4:43:23.26%:32:5.4148E-4:46:33:17:16:44 0/1:49:8:3:5:26:30.77%:26:2.076E-3:43:18:9:9:26 0/1:41:15:8:7:59:25.42%:49:1.1029E-5:43:44:16:28:61 0/1:43:8:6:2:41:19.51%:25:2.6808E-3:43:33:13:20:42 0/0:37:5:4:1:39:12.82%:35:2.7273E-2:44:34:15:19:40 0/1:39:8:4:4:49:16.33%:25:2.8658E-3:42:41:19:22:50 0/1:50:7:4:3:49:14.29%:22:6.2092E-3:45:42:16:26:50 0/0:48:6:3:3:31:19.35%:20:1.1977E-2:44:25:11:14:31 0/0:36:5:3:2:38:13.16%:32:2.7169E-2:46:33:17:16:40 0/0:41:6:1:5:41:14.63%:33:1.2841E-2:42:35:17:18:41 0/0:45:6:3:3:37:16.22%:28:1.2549E-2:46:31:10:21:37 0/1:45:16:4:12:49:32.65%:54:3.5325E-6:48:33:19:14:51 0/1:42:12:8:4:70:17.14%:38:1.4598E-4:46:58:25:33:73 0/1:38:8:4:4:35:22.86%:26:2.4931E-3:43:27:10:17:35 0/1:46:24:12:12:61:39.34%:84:3.5204E-9:44:37:18:19:62 0/0:50:5:2:3:21:23.81%:12:2.3921E-2:48:16:11:5:21 0/0:42:5:3:2:37:13.51%:32:2.706E-2:44:32:15:17:37 0/1:42:10:5:5:45:22.22%:32:5.5766E-4:44:35:13:22:46 0/0:43:4:1:3:29:13.79%:26:5.5981E-2:50:25:17:8:29 0/1:37:10:4:6:34:29.41%:33:4.51E-4:49:24:14:10:34 0/0:45:3:1:2:38:7.89%:43:1.2E-1:45:35:20:15:39 0/1:40:9:4:5:37:24.32%:29:1.1256E-3:42:28:16:12:38 0/1:45:12:6:6:46:26.09%:39:1.0724E-4:44:34:16:18:47 0/1:44:7:2:5:26:26.92%:23:4.9169E-3:43:19:10:9:26 0/1:43:10:5:5:37:27.03%:33:4.8486E-4:49:27:10:17:37 0/1:39:10:5:5:41:24.39%:32:5.2405E-4:45:31:16:15:41 0/1:41:10:3:7:41:24.39%:32:5.2405E-4:44:31:12:19:42 0/0:46:5:1:4:35:14.29%:30:2.6822E-2:43:30:16:14:36 0/1:39:20:7:13:46:43.48%:71:6.7171E-8:43:26:10:16:46 0/1:38:7:4:3:39:17.95%:22:5.8219E-3:46:32:9:23:39 0/1:45:11:6:5:53:20.75%:35:2.7419E-4:45:42:20:22:53 0/0:36:6:4:2:27:22.22%:16:1.1461E-2:47:21:13:8:27 0/1:42:9:4:5:36:25%:29:1.1061E-3:45:27:16:11:40 0/1:50:7:3:4:31:22.58%:22:5.3469E-3:44:24:12:12:32 0/1:50:8:1:7:32:25%:26:2.3764E-3:40:24:15:9:33 0/1:46:13:6:7:41:31.71%:44:3.9497E-5:41:28:13:15:41 0/1:43:15:5:10:54:27.78%:50:9.8829E-6:45:39:19:20:54 0/1:40:8:5:3:37:21.62%:25:2.5617E-3:48:29:11:18:37 0/1:48:10:3:7:39:25.64%:32:5.0524E-4:47:29:14:15:40 0/1:37:15:6:9:57:26.32%:49:1.0583E-5:42:42:19:23:58 0/1:43:9:5:4:45:20%:29:1.2547E-3:44:36:15:21:48 0/1:38:14:6:8:50:28%:46:2.1224E-5:44:36:16:20:52 0/1:44:10:3:7:37:27.03%:33:4.8486E-4:44:27:13:14:37 0/0:40:3:2:1:27:11.11%:28:1.1792E-1:44:24:11:13:28 0/1:43:9:5:4:31:29.03%:30:9.9376E-4:39:22:10:12:31 0/1:44:9:5:4:45:20%:29:1.2547E-3:40:36:14:22:45 0/1:39:14:9:5:45:31.11%:47:1.8462E-5:39:31:12:19:47 0/1:37:7:3:4:41:17.07%:22:5.9136E-3:46:34:15:19:44 0/1:42:11:5:6:44:25%:36:2.3962E-4:45:33:15:18:45 0/1:41:10:1:9:37:27.03%:33:4.8486E-4:45:27:13:14:37 0/0:41:6:6:0:37:16.22%:28:1.2549E-2:41:31:14:17:38 0/0:47:5:3:2:31:16.13%:24:2.6257E-2:39:26:10:16:32 0/1:44:10:2:8:47:21.28%:32:5.7272E-4:43:37:16:21:48 0/1:44:10:5:5:42:23.81%:32:5.3293E-4:43:32:12:20:42 0/1:43:8:6:2:40:20%:25:2.653E-3:42:32:13:19:42 0/1:42:13:7:6:49:26.53%:43:4.8866E-5:41:36:16:20:49 0/1:42:10:4:6:39:25.64%:32:5.0524E-4:43:29:17:12:40 0/0:38:5:5:0:44:11.36%:41:2.7721E-2:43:39:17:22:44 0/1:42:10:3:7:35:28.57%:33:4.6276E-4:43:25:11:14:36 0/1:41:12:3:9:38:31.58%:40:8.7276E-5:42:26:8:18:41 0/1:45:14:8:6:55:25.45%:46:2.3698E-5:39:41:21:20:56 0/1:38:7:4:3:34:20.59%:22:5.5492E-3:41:27:13:14:36 0/1:43:8:5:3:41:19.51%:25:2.6808E-3:39:33:14:19:42 0/1:38:11:5:6:39:28.21%:36:2.1547E-4:41:28:14:14:40 0/1:47:15:5:10:55:27.27%:49:1.0121E-5:45:40:20:20:57 0/1:38:11:5:6:36:30.56%:37:1.9879E-4:39:25:14:11:40 0/1:39:15:7:8:62:24.19%:49:1.1665E-5:42:47:20:27:64 0/1:42:9:6:3:61:14.75%:28:1.4219E-3:43:52:27:25:64 0/1:39:9:4:5:27:33.33%:30:8.8132E-4:43:18:6:12:29 0/0:42:6:5:1:34:17.65%:23:1.2287E-2:41:28:14:14:36 0/1:36:12:4:8:50:24%:39:1.1557E-4:40:38:18:20:54 0/0:45:3:1:2:32:9.38%:34:1.1905E-1:40:29:14:15:34 0/1:41:9:4:5:56:16.07%:28:1.3788E-3:42:47:21:26:59 0/1:37:8:2:6:50:16%:25:2.8851E-3:39:42:19:23:51 0/1:39:10:7:3:42:23.81%:32:5.3293E-4:40:32:16:16:43 0/1:41:15:10:5:40:37.5%:52:6.0618E-6:39:25:10:15:43 0/1:41:10:7:3:47:21.28%:32:5.7272E-4:41:37:18:19:49 0/1:41:8:3:5:37:21.62%:25:2.5617E-3:39:29:13:16:39 0/1:41:13:7:6:68:19.12%:41:6.4842E-5:40:55:28:27:68 0/1:41:10:8:2:42:23.81%:32:5.3293E-4:42:32:11:21:44 0/1:45:11:4:7:47:23.4%:35:2.5227E-4:42:36:20:16:49 0/1:44:7:5:2:32:21.88%:22:5.4182E-3:37:25:12:13:34 0/0:37:6:2:4:34:17.65%:23:1.2287E-2:41:28:12:16:34 0/1:37:10:4:6:54:18.52%:32:6.18E-4:38:44:26:18:56 0/1:40:12:6:6:55:21.82%:39:1.2473E-4:40:43:20:23:56 0/1:37:18:6:12:45:40%:63:4.5278E-7:41:27:10:17:47 0/1:45:8:4:4:52:15.38%:25:2.9216E-3:40:44:22:22:53 0/1:40:11:3:8:40:27.5%:36:2.2064E-4:40:29:16:13:42 0/0:44:6:2:4:37:16.22%:28:1.2549E-2:42:31:18:13:38 0/1:36:8:1:7:50:16%:25:2.8851E-3:42:42:18:24:50 0/1:41:15:5:10:47:31.91%:50:8.0864E-6:44:32:14:18:47 0/1:41:21:9:12:69:30.43%:71:7.9107E-8:41:48:21:27:71 0/1:44:7:6:1:38:18.42%:22:5.7727E-3:44:31:13:18:40 0/1:39:22:10:12:53:41.51%:78:1.5031E-8:41:31:15:16:53 0/1:45:11:6:5:57:19.3%:35:2.8674E-4:43:46:19:27:57 0/1:41:17:10:7:55:30.91%:57:1.768E-6:43:38:20:18:59 0/1:39:9:3:6:51:17.65%:28:1.3283E-3:39:42:22:20:52 MTB_anc 3841654 . T G . PASS AC=115;AF=0.383;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cycloserine|||n.3841654T>G||||||,G|intergenic_region|MODIFIER|alr_Rv3423c-Rv3424c_Rv3424c|gene3499-gene3500|intergenic_region|gene3499-gene3500|||n.3841654T>G||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:39:10:4:6:43:23.26%:32:5.4148E-4:43:33:18:15:45 0/0:44:3:1:2:35:8.57%:40:1.1957E-1:44:32:13:19:35 0/1:41:14:5:9:67:20.9%:45:2.8637E-5:45:53:27:26:67 0/0:37:6:3:3:34:17.65%:23:1.2287E-2:44:28:14:14:35 0/1:42:12:3:9:43:27.91%:39:1.0032E-4:43:31:16:15:46 0/0:46:5:4:1:32:15.62%:24:2.6412E-2:42:27:16:11:32 0/1:46:10:6:4:50:20%:32:5.9342E-4:47:40:19:21:53 0/0:42:4:1:3:28:14.29%:23:5.5746E-2:47:24:10:14:28 0/0:54:4:2:2:41:9.76%:44:5.79E-2:49:37:22:15:43 0/0:43:6:1:5:26:23.08%:13:1.1309E-2:44:20:9:11:27 0/1:40:9:6:3:50:18%:28:1.3171E-3:47:41:21:20:50 0/0:36:3:2:1:36:8.33%:40:1.1972E-1:44:33:17:16:38 0/0:41:5:2:3:34:14.71%:27:2.6693E-2:48:29:14:15:34 0/1:43:11:8:3:49:22.45%:35:2.6004E-4:44:38:17:21:49 0/0:52:6:2:4:28:21.43%:16:1.1603E-2:49:22:12:10:29 0/1:39:11:5:6:35:31.43%:37:1.9282E-4:43:24:11:13:35 0/1:46:8:3:5:35:22.86%:26:2.4931E-3:49:27:15:12:35 0/1:39:7:5:2:26:26.92%:23:4.9169E-3:49:19:14:5:26 0/1:43:7:3:4:25:28%:23:4.8126E-3:43:18:8:10:26 0/0:51:6:3:3:34:17.65%:23:1.2287E-2:46:28:14:14:34 0/0:41:6:2:4:28:21.43%:16:1.1603E-2:41:22:13:9:28 0/1:37:16:13:3:61:26.23%:53:4.9254E-6:42:45:21:24:64 0/1:46:10:5:5:42:23.81%:32:5.3293E-4:49:32:18:14:42 0/1:43:11:8:3:47:23.4%:35:2.5227E-4:44:36:18:18:49 0/1:41:11:3:8:45:24.44%:36:2.4398E-4:44:34:16:18:45 0/1:41:9:4:5:40:22.5%:29:1.1791E-3:50:31:13:18:40 0/1:43:11:4:7:31:35.48%:37:1.6659E-4:47:20:8:12:31 0/0:48:4:2:2:33:12.12%:32:5.6777E-2:49:29:17:12:33 0/1:45:11:7:4:37:29.73%:36:2.0455E-4:48:26:13:13:38 0/0:41:5:3:2:22:22.73%:12:2.4248E-2:43:17:10:7:27 0/1:40:8:1:7:33:24.24%:26:2.4173E-3:46:25:14:11:34 0/0:36:6:3:3:22:27.27%:9:1.057E-2:42:16:6:10:23 0/1:47:12:6:6:55:21.82%:39:1.2473E-4:48:43:22:21:56 0/0:39:6:4:2:31:19.35%:20:1.1977E-2:43:25:16:9:32 0/1:46:8:2:6:55:14.55%:25:2.9718E-3:46:47:23:24:55 0/1:38:12:6:6:50:24%:39:1.1557E-4:41:38:16:22:52 0/1:42:10:4:6:41:24.39%:32:5.2405E-4:44:31:21:10:42 0/1:44:20:9:11:81:24.69%:66:2.5034E-7:45:61:31:30:82 0/1:43:15:8:7:60:25%:49:1.1245E-5:45:45:20:25:60 0/1:47:11:6:5:50:22%:35:2.6374E-4:44:39:20:19:51 0/0:41:5:3:2:35:14.29%:30:2.6822E-2:40:30:12:18:37 0/1:40:9:4:5:55:16.36%:28:1.3694E-3:44:46:25:21:57 0/1:43:11:6:5:35:31.43%:37:1.9282E-4:50:24:18:6:35 0/1:39:7:5:2:39:17.95%:22:5.8219E-3:42:32:11:21:41 0/1:43:11:5:6:28:39.29%:38:1.4422E-4:45:17:8:9:28 0/1:40:11:7:4:46:23.91%:36:2.4819E-4:41:35:16:19:47 0/1:42:8:4:4:30:26.67%:26:2.2875E-3:41:22:12:10:30 0/1:43:11:5:6:52:21.15%:35:2.7081E-4:41:41:17:24:52 0/1:40:15:6:9:45:33.33%:51:7.5306E-6:42:30:16:14:45 0/1:40:12:7:5:49:24.49%:39:1.1358E-4:48:37:19:18:50 0/1:47:7:4:3:25:28%:23:4.8126E-3:53:18:8:10:26 0/1:42:10:6:4:44:22.73%:32:5.4972E-4:43:34:17:17:45 0/1:47:7:3:4:30:23.33%:22:5.2713E-3:47:23:11:12:31 0/1:46:10:6:4:42:23.81%:32:5.3293E-4:47:32:17:15:44 0/1:47:8:3:5:26:30.77%:26:2.076E-3:45:18:9:9:26 0/1:41:15:8:7:57:26.32%:49:1.0583E-5:42:42:15:27:60 0/1:43:10:8:2:42:23.81%:32:5.3293E-4:44:32:12:20:42 0/0:37:5:4:1:37:13.51%:32:2.706E-2:44:32:14:18:39 0/1:39:8:4:4:48:16.67%:25:2.8457E-3:42:40:18:22:50 0/1:50:7:4:3:48:14.58%:22:6.1774E-3:46:41:15:26:49 0/1:46:7:4:3:31:22.58%:22:5.3469E-3:43:24:11:13:32 0/0:34:6:4:2:38:15.79%:28:1.2628E-2:45:32:17:15:40 0/0:42:5:1:4:39:12.82%:35:2.7273E-2:42:34:18:16:41 0/0:44:6:3:3:36:16.67%:25:1.2467E-2:48:30:9:21:38 0/1:43:18:4:14:53:33.96%:61:6.6943E-7:47:35:20:15:53 0/1:41:13:8:5:72:18.06%:41:6.7394E-5:46:59:26:33:75 0/0:41:6:4:2:33:18.18%:23:1.219E-2:43:27:11:16:36 0/1:46:23:12:11:60:38.33%:80:8.6933E-9:44:37:17:20:62 0/0:50:5:2:3:22:22.73%:12:2.4248E-2:48:17:12:5:22 0/0:41:5:3:2:36:13.89%:29:2.6944E-2:45:31:14:17:37 0/1:40:10:5:5:45:22.22%:32:5.5766E-4:44:35:12:23:46 0/0:43:4:1:3:29:13.79%:26:5.5981E-2:50:25:17:8:29 0/1:37:10:4:6:35:28.57%:33:4.6276E-4:48:25:14:11:35 0/0:52:3:1:2:37:8.11%:43:1.1986E-1:45:34:19:15:38 0/1:38:10:4:6:37:27.03%:33:4.8486E-4:43:27:15:12:37 0/1:46:12:6:6:46:26.09%:39:1.0724E-4:45:34:17:17:46 0/1:44:7:2:5:26:26.92%:23:4.9169E-3:42:19:10:9:26 0/1:45:10:5:5:37:27.03%:33:4.8486E-4:47:27:10:17:37 0/1:41:10:5:5:42:23.81%:32:5.3293E-4:44:32:17:15:42 0/1:42:9:3:6:41:21.95%:29:1.1955E-3:43:32:14:18:42 0/0:46:5:1:4:37:13.51%:32:2.706E-2:43:32:18:14:37 0/1:40:20:7:13:46:43.48%:71:6.7171E-8:44:26:10:16:46 0/1:37:7:4:3:38:18.42%:22:5.7727E-3:47:31:9:22:38 0/1:45:11:6:5:53:20.75%:35:2.7419E-4:45:42:20:22:54 0/0:37:6:4:2:27:22.22%:16:1.1461E-2:47:21:13:8:27 0/1:41:10:6:4:39:25.64%:32:5.0524E-4:43:29:17:12:42 0/1:50:7:3:4:31:22.58%:22:5.3469E-3:45:24:12:12:32 0/1:50:8:2:6:31:25.81%:26:2.3332E-3:41:23:14:9:34 0/1:45:13:6:7:40:32.5%:44:3.8184E-5:43:27:12:15:41 0/1:42:15:5:10:54:27.78%:50:9.8829E-6:45:39:19:20:54 0/1:41:7:4:3:36:19.44%:22:5.6667E-3:48:29:11:18:37 0/1:46:11:3:8:40:27.5%:36:2.2064E-4:47:29:14:15:40 0/1:40:15:6:9:58:25.86%:49:1.0808E-5:41:43:20:23:59 0/1:41:11:6:5:46:23.91%:36:2.4819E-4:44:35:14:21:49 0/1:39:13:6:7:50:26%:43:4.9906E-5:44:37:17:20:52 0/1:44:10:3:7:35:28.57%:33:4.6276E-4:45:25:12:13:36 0/0:49:2:2:0:27:7.41%:34:2.4528E-1:44:25:12:13:28 0/1:42:9:5:4:31:29.03%:30:9.9376E-4:39:22:10:12:31 0/1:44:9:5:4:41:21.95%:29:1.1955E-3:41:32:13:19:44 0/1:38:14:9:5:45:31.11%:47:1.8462E-5:39:31:12:19:46 0/1:37:8:4:4:41:19.51%:25:2.6808E-3:43:33:15:18:43 0/1:41:12:5:7:45:26.67%:39:1.05E-4:46:33:15:18:45 0/1:42:9:1:8:37:24.32%:29:1.1256E-3:46:28:14:14:38 0/0:40:6:6:0:38:15.79%:28:1.2628E-2:40:32:15:17:39 0/0:46:5:3:2:31:16.13%:24:2.6257E-2:41:26:10:16:31 0/1:43:10:2:8:48:20.83%:32:5.7985E-4:43:38:18:20:48 0/1:43:11:5:6:42:26.19%:36:2.3046E-4:44:31:12:19:43 0/1:42:8:6:2:43:18.6%:25:2.7329E-3:41:35:13:22:44 0/1:42:13:7:6:49:26.53%:43:4.8866E-5:40:36:16:20:49 0/1:42:10:4:6:39:25.64%:32:5.0524E-4:43:29:17:12:40 0/0:38:5:5:0:45:11.11%:44:2.7799E-2:43:40:18:22:45 0/1:45:9:3:6:33:27.27%:29:1.042E-3:44:24:9:15:36 0/1:40:12:3:9:41:29.27%:40:9.5339E-5:42:29:10:19:42 0/1:45:14:8:6:57:24.56%:46:2.4613E-5:39:43:23:20:57 0/1:41:7:4:3:35:20%:22:5.6095E-3:41:28:12:16:35 0/1:41:8:5:3:41:19.51%:25:2.6808E-3:39:33:14:19:42 0/1:38:11:5:6:41:26.83%:36:2.2563E-4:40:30:14:16:42 0/1:49:15:6:9:54:27.78%:50:9.8829E-6:46:39:20:19:57 0/1:39:11:5:6:37:29.73%:36:2.0455E-4:40:26:15:11:39 0/1:38:14:6:8:62:22.58%:45:2.6732E-5:42:48:20:28:64 0/1:43:9:6:3:63:14.29%:28:1.4373E-3:42:54:29:25:63 0/1:39:9:4:5:28:32.14%:30:9.1169E-4:40:19:6:13:29 0/1:38:7:5:2:34:20.59%:22:5.5492E-3:42:27:13:14:36 0/1:35:12:6:6:48:25%:39:1.1153E-4:39:36:16:20:54 0/0:45:3:1:2:33:9.09%:37:1.1923E-1:39:30:15:15:35 0/1:41:9:3:6:56:16.07%:28:1.3788E-3:43:47:20:27:59 0/1:35:8:2:6:52:15.38%:25:2.9216E-3:38:44:21:23:53 0/1:38:11:7:4:42:26.19%:36:2.3046E-4:41:31:15:16:43 0/1:41:15:10:5:40:37.5%:52:6.0618E-6:40:25:10:15:43 0/1:40:10:8:2:47:21.28%:32:5.7272E-4:41:37:18:19:49 0/1:40:8:3:5:37:21.62%:25:2.5617E-3:39:29:13:16:39 0/1:42:12:6:6:64:18.75%:38:1.3842E-4:39:52:25:27:68 0/1:41:10:9:1:42:23.81%:32:5.3293E-4:41:32:10:22:44 0/1:42:12:4:8:46:26.09%:39:1.0724E-4:42:34:21:13:48 0/1:43:7:5:2:31:22.58%:22:5.3469E-3:36:24:11:13:35 0/0:37:6:2:4:36:16.67%:25:1.2467E-2:41:30:13:17:36 0/1:40:8:3:5:53:15.09%:25:2.9389E-3:39:45:25:20:58 0/1:39:12:6:6:55:21.82%:39:1.2473E-4:40:43:18:25:57 0/1:35:19:6:13:48:39.58%:66:2.0555E-7:41:29:11:18:48 0/1:45:8:4:4:51:15.69%:25:2.9037E-3:41:43:22:21:53 0/1:40:11:3:8:41:26.83%:36:2.2563E-4:39:30:17:13:43 0/0:48:6:2:4:37:16.22%:28:1.2549E-2:42:31:18:13:38 0/1:37:8:1:7:50:16%:25:2.8851E-3:41:42:18:24:50 0/1:42:14:5:9:45:31.11%:47:1.8462E-5:45:31:13:18:47 0/1:40:21:9:12:69:30.43%:71:7.9107E-8:42:48:21:27:70 0/0:45:6:5:1:38:15.79%:28:1.2628E-2:44:32:14:18:40 0/1:40:21:10:11:53:39.62%:73:3.9927E-8:40:32:15:17:54 0/1:45:11:6:5:57:19.3%:35:2.8674E-4:43:46:19:27:57 0/1:41:16:9:7:54:29.63%:53:4.1444E-6:43:38:21:17:57 0/1:39:9:3:6:52:17.31%:28:1.3391E-3:39:43:23:20:53 MTB_anc 3841662 . T C . PASS AC=129;AF=0.430;AN=300;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cycloserine|||n.3841662T>C||||||,C|intergenic_region|MODIFIER|alr_Rv3423c-Rv3424c_Rv3424c|gene3499-gene3500|intergenic_region|gene3499-gene3500|||n.3841662T>C||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:10:4:6:47:21.28%:32:5.7272E-4:45:37:20:17:47 0/0:45:3:1:2:33:9.09%:37:1.1923E-1:45:30:14:16:33 0/1:42:15:5:10:70:21.43%:48:1.3194E-5:46:55:29:26:70 0/1:40:9:5:4:37:24.32%:29:1.1256E-3:44:28:14:14:37 0/1:42:13:3:10:45:28.89%:43:4.4424E-5:45:32:16:16:46 0/0:47:5:4:1:31:16.13%:24:2.6257E-2:43:26:16:10:32 0/1:49:10:6:4:51:19.61%:32:5.9987E-4:46:41:21:20:51 0/0:48:4:1:3:27:14.81%:23:5.5494E-2:46:23:9:14:27 0/0:48:5:2:3:41:12.2%:38:2.7465E-2:49:36:22:14:42 0/1:41:9:2:7:28:32.14%:30:9.1169E-4:43:19:9:10:28 0/1:43:10:7:3:53:18.87%:32:6.1215E-4:48:43:23:20:54 0/0:37:4:2:2:38:10.53%:37:5.7534E-2:43:34:19:15:40 0/1:44:7:2:5:34:20.59%:22:5.5492E-3:48:27:14:13:34 0/1:43:12:8:4:50:24%:39:1.1557E-4:45:38:17:21:50 0/1:46:9:3:6:30:30%:30:9.678E-4:49:21:11:10:30 0/1:41:12:5:7:35:34.29%:41:7.8434E-5:44:23:13:10:35 0/1:45:8:3:5:34:23.53%:26:2.4562E-3:49:26:14:12:34 0/1:40:8:6:2:25:32%:26:2.0146E-3:46:17:12:5:25 0/1:45:9:4:5:26:34.62%:30:8.4928E-4:39:17:8:9:27 0/1:54:7:4:3:35:20%:22:5.6095E-3:48:28:14:14:35 0/1:40:7:2:5:30:23.33%:22:5.2713E-3:45:23:14:9:32 0/1:41:16:12:4:60:26.67%:53:4.8192E-6:42:44:21:23:62 0/1:47:10:5:5:43:23.26%:32:5.4148E-4:48:33:19:14:43 0/1:47:13:9:4:52:25%:42:5.1909E-5:44:39:17:22:53 0/1:42:11:3:8:44:25%:36:2.3962E-4:45:33:16:17:45 0/1:48:11:4:7:42:26.19%:36:2.3046E-4:48:31:15:16:43 0/1:43:13:6:7:33:39.39%:45:2.8029E-5:48:20:8:12:33 0/1:46:8:5:3:35:22.86%:26:2.4931E-3:48:27:15:12:35 0/1:45:12:7:5:37:32.43%:40:8.4418E-5:49:25:13:12:38 0/0:41:5:3:2:26:19.23%:17:2.531E-2:41:21:13:8:28 0/1:44:9:1:8:33:27.27%:29:1.042E-3:47:24:13:11:34 0/1:40:9:5:4:25:36%:30:8.1542E-4:40:16:7:9:25 0/1:51:12:6:6:56:21.43%:38:1.2642E-4:47:44:23:21:56 0/1:40:7:4:3:33:21.21%:22:5.4855E-3:42:26:17:9:33 0/1:45:9:3:6:57:15.79%:28:1.388E-3:45:48:22:26:58 0/1:39:16:6:10:51:31.37%:54:3.7826E-6:41:35:16:19:51 0/1:41:12:5:7:44:27.27%:39:1.027E-4:44:32:21:11:44 0/1:47:23:11:12:82:28.05%:77:1.9793E-8:44:59:29:30:84 0/1:47:16:8:8:60:26.67%:53:4.8192E-6:45:44:21:23:61 0/1:47:12:7:5:47:25.53%:39:1.0942E-4:45:35:18:17:47 0/0:42:5:3:2:37:13.51%:32:2.706E-2:39:32:13:19:37 0/1:42:10:5:5:58:17.24%:31:6.3967E-4:44:48:26:22:59 0/1:45:12:7:5:34:35.29%:41:7.5302E-5:50:22:17:5:35 0/1:41:8:5:3:43:18.6%:25:2.7329E-3:43:35:13:22:44 0/1:43:13:5:8:29:44.83%:46:2.1506E-5:44:16:9:7:30 0/1:41:12:7:5:44:27.27%:39:1.027E-4:42:32:16:16:46 0/1:43:8:4:4:33:24.24%:26:2.4173E-3:42:25:13:12:34 0/1:43:12:5:7:52:23.08%:39:1.1939E-4:40:40:17:23:52 0/1:41:16:7:9:45:35.56%:55:3.0122E-6:43:29:16:13:46 0/1:45:13:8:5:54:24.07%:42:5.3813E-5:46:41:19:22:54 0/1:48:9:4:5:24:37.5%:31:7.7962E-4:53:15:8:7:24 0/1:44:13:7:6:45:28.89%:43:4.4424E-5:42:32:17:15:45 0/1:45:9:4:5:32:28.12%:29:1.0185E-3:47:23:11:12:32 0/1:45:11:7:4:45:24.44%:36:2.4398E-4:46:34:18:16:46 0/1:50:9:3:6:25:36%:30:8.1542E-4:45:16:9:7:26 0/1:41:20:10:10:62:32.26%:68:1.5316E-7:41:42:16:26:63 0/1:44:10:8:2:41:24.39%:32:5.2405E-4:43:31:13:18:42 0/0:38:6:4:2:35:17.14%:25:1.238E-2:44:29:14:15:38 0/1:39:12:6:6:51:23.53%:39:1.1751E-4:41:39:19:20:51 0/1:54:8:5:3:49:16.33%:25:2.8658E-3:45:41:15:26:49 0/1:45:8:4:4:30:26.67%:26:2.2875E-3:43:22:11:11:32 0/1:42:7:4:3:35:20%:22:5.6095E-3:48:28:14:14:37 0/0:40:6:1:5:40:15%:30:1.2773E-2:42:34:18:16:40 0/0:45:6:3:3:37:16.22%:28:1.2549E-2:46:31:11:20:38 0/1:44:18:4:14:55:32.73%:61:7.2242E-7:48:37:21:16:55 0/1:40:17:10:7:73:23.29%:55:2.6617E-6:45:56:26:30:75 0/1:39:10:4:6:34:29.41%:33:4.51E-4:44:24:10:14:34 0/1:47:25:13:12:61:40.98%:88:1.3291E-9:45:36:17:19:61 0/1:49:7:4:3:23:30.43%:23:4.5803E-3:49:16:11:5:23 0/0:43:5:3:2:38:13.16%:32:2.7169E-2:45:33:16:17:38 0/1:41:12:6:6:46:26.09%:39:1.0724E-4:45:34:13:21:47 0/0:43:4:2:2:29:13.79%:26:5.5981E-2:50:25:17:8:30 0/1:38:9:4:5:35:25.71%:29:1.0857E-3:50:26:14:12:36 0/0:52:3:1:2:35:8.57%:40:1.1957E-1:45:32:18:14:36 0/1:41:12:4:8:40:30%:40:9.2733E-5:43:28:15:13:40 0/1:48:13:6:7:47:27.66%:43:4.5578E-5:44:33:16:17:47 0/1:44:7:2:5:25:28%:23:4.8126E-3:42:18:10:8:26 0/1:46:10:5:5:34:29.41%:33:4.51E-4:49:24:8:16:34 0/1:44:11:5:6:43:25.58%:36:2.3512E-4:43:32:17:15:45 0/1:47:11:3:8:40:27.5%:36:2.2064E-4:44:29:13:16:42 0/1:48:8:2:6:38:21.05%:25:2.5935E-3:42:30:18:12:38 0/1:40:20:7:13:47:42.55%:71:7.2254E-8:42:27:10:17:47 0/1:38:8:5:3:37:21.62%:25:2.5617E-3:45:29:10:19:37 0/1:44:12:7:5:53:22.64%:39:1.2122E-4:45:41:19:22:54 0/0:38:6:4:2:25:24%:14:1.1145E-2:47:19:13:6:27 0/1:40:14:7:7:39:35.9%:48:1.4735E-5:45:25:13:12:40 0/1:50:7:3:4:33:21.21%:22:5.4855E-3:42:26:12:14:33 0/1:49:8:1:7:32:25%:26:2.3764E-3:42:24:15:9:33 0/1:45:14:7:7:43:32.56%:47:1.6656E-5:41:28:14:14:43 0/1:43:15:5:10:52:28.85%:50:9.3931E-6:47:37:18:19:53 0/1:41:8:5:3:37:21.62%:25:2.5617E-3:49:29:11:18:38 0/1:48:12:4:8:39:30.77%:40:9.0046E-5:47:27:13:14:41 0/1:39:18:8:10:58:31.03%:60:8.0038E-7:42:40:21:19:59 0/1:41:13:6:7:48:27.08%:43:4.7798E-5:43:35:15:20:48 0/1:39:15:7:8:49:30.61%:50:8.6234E-6:45:34:15:19:50 0/1:46:10:3:7:36:27.78%:33:4.7404E-4:45:26:12:14:36 0/0:53:3:2:1:27:11.11%:28:1.1792E-1:43:24:11:13:28 0/1:41:9:5:4:32:28.12%:29:1.0185E-3:38:23:10:13:32 0/1:43:11:6:5:42:26.19%:36:2.3046E-4:42:31:13:18:45 0/1:39:15:10:5:45:33.33%:51:7.5306E-6:39:30:12:18:47 0/1:40:10:6:4:41:24.39%:32:5.2405E-4:43:31:14:17:42 0/1:41:12:5:7:44:27.27%:39:1.027E-4:46:32:15:17:44 0/1:41:10:1:9:35:28.57%:33:4.6276E-4:48:25:13:12:37 0/0:42:6:6:0:36:16.67%:25:1.2467E-2:40:30:14:16:37 0/0:46:5:3:2:28:17.86%:19:2.5729E-2:42:23:9:14:31 0/1:43:11:3:8:49:22.45%:35:2.6004E-4:44:38:18:20:50 0/1:45:12:6:6:44:27.27%:39:1.027E-4:43:32:13:19:45 0/1:45:9:6:3:47:19.15%:28:1.2811E-3:41:38:15:23:47 0/1:45:13:6:7:47:27.66%:43:4.6702E-5:39:34:14:20:49 0/1:43:10:4:6:40:25%:32:5.1483E-4:41:30:18:12:40 0/0:42:6:6:0:47:12.77%:42:1.3188E-2:43:41:18:23:47 0/1:44:12:4:8:39:30.77%:40:9.0046E-5:42:27:12:15:39 0/1:40:13:3:10:41:31.71%:44:3.9497E-5:40:28:11:17:43 0/1:45:14:8:6:58:24.14%:46:2.5055E-5:39:44:25:19:58 0/1:42:7:4:3:32:21.88%:22:5.4182E-3:41:25:11:14:34 0/1:42:11:7:4:45:24.44%:36:2.4398E-4:38:34:16:18:46 0/1:39:12:5:7:41:29.27%:40:9.5339E-5:41:29:14:15:42 0/1:49:16:6:10:57:28.07%:53:4.4899E-6:45:41:22:19:57 0/1:39:11:5:6:40:27.5%:36:2.2064E-4:39:29:18:11:40 0/1:38:16:7:9:62:25.81%:52:5.0299E-6:41:46:19:27:63 0/1:45:9:6:3:63:14.29%:28:1.4373E-3:41:54:28:26:64 0/1:42:10:4:6:27:37.04%:34:3.5253E-4:43:17:7:10:29 0/1:46:7:5:2:36:19.44%:22:5.6667E-3:43:29:14:15:37 0/1:36:14:6:8:50:28%:46:2.1224E-5:40:36:17:19:53 0/0:41:5:2:3:37:13.51%:32:2.706E-2:39:32:16:16:37 0/1:42:10:4:6:54:18.52%:32:6.18E-4:43:44:20:24:57 0/1:37:8:2:6:53:15.09%:25:2.9389E-3:38:45:22:23:53 0/1:39:11:8:3:43:25.58%:36:2.3512E-4:41:32:17:15:44 0/1:41:18:11:7:40:45%:64:3.1919E-7:40:22:8:14:43 0/1:42:11:8:3:47:23.4%:35:2.5227E-4:40:36:17:19:49 0/1:44:11:5:6:37:29.73%:36:2.0455E-4:39:26:11:15:39 0/1:41:14:8:6:66:21.21%:45:2.8272E-5:38:52:26:26:68 0/1:40:14:12:2:47:29.79%:47:1.9604E-5:40:33:11:22:47 0/1:48:13:4:9:48:27.08%:43:4.7798E-5:42:35:21:14:49 0/1:42:8:5:3:34:23.53%:26:2.4562E-3:37:26:15:11:37 0/0:38:6:2:4:37:16.22%:28:1.2549E-2:39:31:14:17:37 0/1:40:12:4:8:57:21.05%:38:1.2806E-4:38:45:25:20:58 0/1:41:13:7:6:57:22.81%:42:5.6497E-5:40:44:20:24:58 0/1:38:20:6:14:48:41.67%:71:7.7415E-8:40:28:11:17:50 0/1:44:9:4:5:54:16.67%:28:1.3596E-3:39:45:22:23:55 0/1:39:12:3:9:42:28.57%:40:9.7866E-5:40:30:16:14:42 0/0:49:6:2:4:36:16.67%:25:1.2467E-2:41:30:17:13:37 0/1:37:10:3:7:50:20%:32:5.9342E-4:41:40:17:23:50 0/1:42:17:7:10:50:34%:58:1.4808E-6:45:33:13:20:50 0/1:41:23:9:14:67:34.33%:79:1.2137E-8:43:44:19:25:69 0/1:43:8:7:1:43:18.6%:25:2.7329E-3:44:35:15:20:44 0/1:40:22:10:12:50:44%:79:1.2104E-8:41:28:14:14:51 0/1:46:11:6:5:57:19.3%:35:2.8674E-4:43:46:20:26:59 0/1:40:19:10:9:59:32.2%:64:3.3862E-7:43:40:22:18:59 0/1:41:12:6:6:52:23.08%:39:1.1939E-4:38:40:21:19:53 MTB_anc 3841663 . C T . PASS AC=123;AF=0.410;AN=300;ANN=T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cycloserine|||n.3841663C>T||||||,T|intergenic_region|MODIFIER|alr_Rv3423c-Rv3424c_Rv3424c|gene3499-gene3500|intergenic_region|gene3499-gene3500|||n.3841663C>T||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:39:11:5:6:48:22.92%:35:2.5621E-4:45:37:20:17:48 0/0:45:3:1:2:32:9.38%:34:1.1905E-1:45:29:13:16:32 0/1:42:15:5:10:70:21.43%:48:1.3194E-5:46:55:29:26:70 0/1:38:8:5:3:36:22.22%:25:2.5282E-3:45:28:14:14:36 0/1:42:13:3:10:46:28.26%:43:4.5578E-5:44:33:17:16:46 0/0:47:5:4:1:32:15.62%:24:2.6412E-2:42:27:16:11:32 0/1:49:10:6:4:51:19.61%:32:5.9987E-4:46:41:21:20:51 0/0:47:4:1:3:26:15.38%:20:5.5222E-2:46:22:9:13:26 0/0:54:4:2:2:40:10%:40:5.7784E-2:49:36:22:14:41 0/1:41:9:2:7:28:32.14%:30:9.1169E-4:44:19:9:10:28 0/1:42:10:7:3:55:18.18%:32:6.2367E-4:48:45:23:22:55 0/0:37:4:2:2:40:10%:40:5.7784E-2:42:36:19:17:40 0/0:41:6:2:4:34:17.65%:23:1.2287E-2:49:28:14:14:34 0/1:43:12:8:4:50:24%:39:1.1557E-4:45:38:17:21:50 0/1:49:7:2:5:30:23.33%:22:5.2713E-3:48:23:12:11:30 0/1:41:12:5:7:35:34.29%:41:7.8434E-5:44:23:13:10:35 0/1:46:8:3:5:34:23.53%:26:2.4562E-3:49:26:14:12:34 0/1:40:8:6:2:25:32%:26:2.0146E-3:46:17:12:5:25 0/1:43:8:4:4:25:32%:26:2.0146E-3:41:17:8:9:26 0/1:53:7:4:3:35:20%:22:5.6095E-3:48:28:14:14:35 0/0:41:6:2:4:31:19.35%:20:1.1977E-2:42:25:13:12:31 0/1:39:16:13:3:61:26.23%:53:4.9254E-6:42:45:22:23:62 0/1:47:10:5:5:43:23.26%:32:5.4148E-4:48:33:19:14:43 0/1:44:13:9:4:51:25.49%:42:5.092E-5:44:38:18:20:52 0/1:42:11:3:8:44:25%:36:2.3962E-4:44:33:16:17:45 0/1:44:10:4:6:42:23.81%:32:5.3293E-4:49:32:15:17:42 0/1:43:13:6:7:32:40.62%:45:2.6443E-5:47:19:7:12:32 0/0:45:6:3:3:35:17.14%:25:1.238E-2:48:29:17:12:35 0/1:45:12:7:5:37:32.43%:40:8.1472E-5:49:24:13:11:38 0/0:41:6:4:2:26:23.08%:13:1.1309E-2:40:20:11:9:29 0/1:40:8:1:7:33:24.24%:26:2.4173E-3:47:25:14:11:34 0/1:38:7:4:3:23:30.43%:23:4.5803E-3:43:16:7:9:25 0/1:51:12:6:6:56:21.43%:38:1.2642E-4:48:44:23:21:56 0/1:40:7:4:3:33:21.21%:22:5.4182E-3:42:25:17:8:33 0/1:45:9:3:6:58:15.52%:28:1.3968E-3:45:49:22:27:58 0/1:39:15:6:9:51:29.41%:50:9.1412E-6:41:36:16:20:51 0/1:41:12:5:7:44:27.27%:39:1.027E-4:43:32:22:10:45 0/1:45:23:10:13:84:27.38%:76:2.0803E-8:45:61:30:31:85 0/1:47:16:8:8:61:26.23%:53:4.9254E-6:45:45:20:25:62 0/1:48:11:6:5:46:23.91%:36:2.4819E-4:45:35:18:17:47 0/0:42:5:3:2:37:13.51%:32:2.706E-2:39:32:13:19:37 0/1:41:10:5:5:58:17.24%:31:6.3967E-4:43:48:26:22:58 0/1:44:11:6:5:35:31.43%:37:1.9282E-4:50:24:19:5:35 0/1:40:8:5:3:43:18.6%:25:2.7329E-3:43:35:13:22:43 0/1:42:12:5:7:29:41.38%:42:5.8193E-5:43:17:9:8:31 0/1:41:11:7:4:46:23.91%:36:2.4819E-4:41:35:17:18:47 0/1:43:8:4:4:33:24.24%:26:2.4173E-3:41:25:14:11:34 0/1:43:12:5:7:51:23.53%:39:1.1751E-4:40:39:16:23:52 0/1:41:16:7:9:46:34.78%:55:3.1446E-6:43:30:17:13:46 0/1:46:12:8:4:53:22.64%:39:1.2122E-4:46:41:19:22:54 0/1:47:9:5:4:25:36%:30:8.1542E-4:54:16:8:8:25 0/1:44:11:7:4:44:25%:36:2.3962E-4:43:33:17:16:45 0/1:42:9:4:5:30:30%:30:9.678E-4:48:21:11:10:31 0/1:48:9:6:3:45:20%:29:1.2547E-3:46:36:19:17:46 0/1:48:8:3:5:25:32%:26:2.0146E-3:45:17:8:9:25 0/1:42:16:9:7:62:25.81%:52:5.0299E-6:41:46:17:29:63 0/1:44:10:8:2:42:23.81%:32:5.3293E-4:44:32:13:19:42 0/0:38:5:4:1:38:13.16%:32:2.7169E-2:43:33:15:18:38 0/1:43:9:6:3:49:18.37%:28:1.3055E-3:41:40:19:21:51 0/1:53:7:4:3:48:14.58%:22:6.1774E-3:45:41:16:25:49 0/1:47:7:4:3:30:23.33%:22:5.2713E-3:42:23:11:12:32 0/0:36:6:4:2:36:16.67%:25:1.2467E-2:46:30:15:15:37 0/0:41:6:1:5:40:15%:30:1.2773E-2:42:34:18:16:40 0/0:45:6:3:3:37:16.22%:28:1.2549E-2:46:31:11:20:38 0/1:45:18:4:14:54:33.33%:61:6.9602E-7:48:36:21:15:54 0/1:39:14:9:5:73:19.18%:45:3.0676E-5:45:59:26:33:75 0/1:40:7:4:3:32:21.88%:22:5.4182E-3:44:25:10:15:34 0/1:47:25:13:12:61:40.98%:88:1.3291E-9:45:36:17:19:61 0/1:46:7:4:3:22:31.82%:23:4.4505E-3:49:15:10:5:23 0/0:43:5:3:2:39:12.82%:35:2.7273E-2:46:34:17:17:39 0/1:41:12:6:6:46:26.09%:39:1.0724E-4:45:34:12:22:46 0/0:46:3:1:2:28:10.71%:28:1.1792E-1:50:24:16:8:30 0/1:40:10:4:6:35:28.57%:33:4.6276E-4:51:25:14:11:36 0/0:47:4:2:2:34:11.76%:31:5.6946E-2:46:30:16:14:35 0/1:42:11:4:7:40:27.5%:36:2.2064E-4:42:29:16:13:41 0/1:47:12:6:6:45:27.27%:39:1.027E-4:45:32:15:17:47 0/1:44:7:2:5:26:26.92%:23:4.9169E-3:42:19:10:9:26 0/1:47:10:5:5:34:29.41%:33:4.51E-4:49:24:8:16:34 0/1:42:9:5:4:44:20.45%:29:1.2408E-3:42:35:19:16:45 0/1:43:9:3:6:41:21.95%:29:1.1955E-3:44:32:14:18:42 0/0:46:5:1:4:38:13.16%:32:2.7169E-2:44:33:19:14:38 0/1:40:20:7:13:47:42.55%:71:7.2254E-8:42:27:10:17:47 0/1:38:8:5:3:38:21.05%:25:2.5935E-3:45:30:10:20:38 0/1:45:12:7:5:54:22.22%:39:1.23E-4:45:42:20:22:54 0/0:38:6:4:2:28:21.43%:16:1.1603E-2:45:22:14:8:28 0/1:42:11:6:5:37:29.73%:37:1.9879E-4:44:25:14:11:40 0/1:50:7:3:4:33:21.21%:22:5.4855E-3:43:26:12:14:33 0/1:52:7:2:5:30:23.33%:22:5.2713E-3:42:23:14:9:33 0/1:45:14:7:7:43:32.56%:47:1.727E-5:41:29:15:14:44 0/1:43:16:5:11:54:29.63%:53:4.1444E-6:46:38:19:19:54 0/1:40:8:5:3:37:21.62%:25:2.5617E-3:49:29:11:18:37 0/1:48:12:4:8:41:29.27%:40:9.5339E-5:46:29:15:14:41 0/1:40:16:7:9:58:27.59%:53:4.6015E-6:42:42:21:21:59 0/1:43:11:6:5:46:23.91%:36:2.4819E-4:43:35:15:20:48 0/1:39:14:6:8:51:27.45%:46:2.1741E-5:44:37:16:21:51 0/1:47:10:3:7:36:27.78%:33:4.7404E-4:44:26:12:14:36 0/0:51:3:2:1:28:10.71%:28:1.1818E-1:43:25:12:13:28 0/1:44:8:5:3:30:26.67%:26:2.2875E-3:39:22:10:12:32 0/1:42:10:5:5:45:22.22%:32:5.5766E-4:42:35:14:21:45 0/1:39:15:10:5:46:32.61%:51:7.8109E-6:39:31:13:18:47 0/1:40:9:5:4:41:21.95%:29:1.1955E-3:44:32:14:18:42 0/1:42:11:5:6:43:25.58%:36:2.3512E-4:46:32:15:17:44 0/1:42:10:1:9:37:27.03%:33:4.8486E-4:47:27:13:14:37 0/0:41:6:6:0:37:16.22%:28:1.2549E-2:39:31:15:16:37 0/0:47:5:3:2:31:16.13%:24:2.6257E-2:41:26:10:16:32 0/1:42:11:3:8:47:23.4%:35:2.5227E-4:45:36:16:20:49 0/1:43:13:6:7:45:28.89%:43:4.4424E-5:43:32:13:19:45 0/1:45:9:6:3:45:20%:29:1.2547E-3:42:36:14:22:47 0/1:43:13:7:6:48:27.08%:43:4.7798E-5:40:35:15:20:48 0/1:45:9:4:5:39:23.08%:29:1.162E-3:41:30:18:12:40 0/0:42:6:6:0:47:12.77%:42:1.3188E-2:42:41:18:23:47 0/1:45:11:4:7:39:28.21%:36:2.1547E-4:41:28:12:16:39 0/1:40:13:3:10:43:30.23%:43:4.2025E-5:39:30:11:19:43 0/1:45:14:8:6:56:25%:46:2.416E-5:40:42:23:19:57 0/1:42:8:4:4:35:22.86%:26:2.4931E-3:41:27:11:16:35 0/1:44:10:6:4:48:20.83%:32:5.7985E-4:38:38:17:21:48 0/1:39:11:5:6:41:26.83%:36:2.2563E-4:41:30:14:16:42 0/1:48:16:6:10:58:27.59%:53:4.6015E-6:45:42:23:19:58 0/1:39:11:5:6:38:28.95%:36:2.1011E-4:39:27:16:11:39 0/1:38:15:7:8:61:24.59%:49:1.1457E-5:41:46:19:27:63 0/1:45:9:6:3:62:14.52%:28:1.4297E-3:41:53:27:26:63 0/1:43:9:4:5:27:33.33%:30:8.8132E-4:43:18:6:12:29 0/0:41:6:5:1:36:16.67%:25:1.2467E-2:42:30:15:15:37 0/1:36:12:5:7:48:25%:39:1.1153E-4:40:36:16:20:53 0/0:42:5:2:3:36:13.89%:29:2.6944E-2:40:31:16:15:37 0/1:42:10:4:6:56:17.86%:32:6.2917E-4:43:46:22:24:57 0/1:37:8:2:6:52:15.38%:25:2.9216E-3:38:44:20:24:53 0/1:38:12:8:4:43:27.91%:39:1.0032E-4:40:31:16:15:44 0/1:43:16:11:5:41:39.02%:56:2.4696E-6:40:25:9:16:44 0/1:41:12:8:4:49:24.49%:39:1.1358E-4:41:37:17:20:50 0/1:39:10:3:7:36:27.78%:33:4.7404E-4:39:26:12:14:38 0/1:43:12:7:5:63:19.05%:38:1.3705E-4:39:51:24:27:67 0/1:41:13:11:2:47:27.66%:43:4.6702E-5:40:34:12:22:47 0/1:46:13:4:9:48:27.08%:43:4.7798E-5:43:35:21:14:49 0/1:44:7:5:2:34:20.59%:22:5.5492E-3:37:27:15:12:38 0/0:37:6:2:4:37:16.22%:28:1.2549E-2:39:31:14:17:37 0/1:41:11:4:7:56:19.64%:35:2.8374E-4:38:45:25:20:60 0/1:41:13:7:6:54:24.07%:42:5.3813E-5:40:41:17:24:56 0/1:38:18:6:12:47:38.3%:62:5.072E-7:41:29:11:18:50 0/1:45:8:4:4:54:14.81%:25:2.9557E-3:39:46:22:24:55 0/1:41:10:3:7:40:25%:32:5.1483E-4:40:30:16:14:42 0/0:49:6:2:4:36:16.67%:25:1.2467E-2:41:30:16:14:36 0/1:37:8:2:6:49:16.33%:25:2.8658E-3:42:41:18:23:50 0/1:43:14:6:8:47:29.79%:47:1.9604E-5:45:33:14:19:49 0/1:39:22:9:13:66:33.33%:75:2.9084E-8:42:44:20:24:69 0/1:43:8:7:1:42:19.05%:25:2.7074E-3:44:34:13:21:43 0/1:41:22:10:12:50:44%:79:1.2104E-8:41:28:14:14:50 0/1:46:11:6:5:59:18.64%:35:2.925E-4:43:48:20:28:59 0/1:41:16:10:6:56:28.57%:53:4.3766E-6:42:40:22:18:59 0/1:42:9:4:5:51:17.65%:28:1.3283E-3:38:42:23:19:53 MTB_anc 3842620 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|PPE57_Rv3425|gene3501|transcript|Transcript_gene3501|Coding|1/1|c.382A>G|p.Thr128Ala|382/531|382/531|128/176||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3842620A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3842620A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:48:28:20:49:97.96%:99:1.9625E-27:60:1:0:1:49 1/1:45:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:47:33:14:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:41:22:19:42:97.62%:99:2.5612E-23:60:1:0:1:44 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:33:21:12:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:16:15:32:96.88%:99:1.8007E-17:39:1:1:0:32 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:19:11:8:20:95%:98:1.5234E-10:60:1:1:0:21 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:59:37:22:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:15:7:8:16:93.75%:75:2.8282E-8:39:1:1:0:16 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:48:27:21:49:97.96%:99:1.9625E-27:39:1:1:0:49 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:23:15:8:24:95.83%:99:7.7525E-13:60:1:0:1:26 1/1:41:39:22:17:40:97.5%:99:3.8137E-22:20:1:0:1:41 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:26:15:11:27:96.3%:99:1.4382E-14:38:1:1:0:29 1/1:39:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:62:39:23:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:31:17:14:32:96.88%:99:1.8007E-17:60:1:0:1:33 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:21:16:5:22:95.45%:99:1.0931E-11:60:1:0:1:23 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:37:27:10:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:32:14:18:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:53:41:12:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:36:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:37:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:48:35:13:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 3842625 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|PPE57_Rv3425|gene3501|transcript|Transcript_gene3501|Coding|1/1|c.387A>G|p.Pro129Pro|387/531|387/531|129/176||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3842625A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3842625A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:47:28:19:48:97.92%:99:7.6145E-27:60:1:0:1:48 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:17:10:7:18:94.44%:86:2.0936E-9:39:1:0:1:18 1/1:41:47:33:14:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:16:15:32:96.88%:99:1.8007E-17:39:1:1:0:32 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:19:10:9:20:95%:98:1.5234E-10:60:1:1:0:21 1/1:40:22:12:10:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:40:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:15:7:8:16:93.75%:75:2.8282E-8:37:1:1:0:16 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:48:27:21:49:97.96%:99:1.9625E-27:39:1:1:0:49 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:14:10:25:96%:99:2.0568E-13:60:1:0:1:25 1/1:42:38:20:18:39:97.44%:99:1.4697E-21:37:1:0:1:39 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:16:12:29:96.55%:99:9.9776E-16:39:1:1:0:29 1/1:39:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:60:38:22:60:100%:99:1.035E-35:0:0:0:0:61 1/1:39:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:36:24:12:37:97.3%:99:2.1762E-20:33:1:0:1:37 1/1:41:25:14:11:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:42:22:16:6:23:95.65%:99:2.9149E-12:60:1:0:1:24 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:33:15:18:34:97.06%:99:1.2301E-18:32:1:1:0:34 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:42:31:11:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:51:39:12:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:47:32:15:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:48:35:13:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 3842631 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|PPE57_Rv3425|gene3501|transcript|Transcript_gene3501|Coding|1/1|c.393C>T|p.Ile131Ile|393/531|393/531|131/176||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3842631C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3842631C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:37:38:25:13:40 0/0:0:0:0:0:17:0%:33:1E0:48:17:10:7:17 0/0:0:0:0:0:43:0%:82:1E0:41:43:27:16:43 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:18 0/0:0:0:0:0:45:0%:85:1E0:45:45:28:17:47 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:21:8:29 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:36 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:19 0/0:0:0:0:0:43:0%:82:1E0:41:43:30:13:46 0/0:0:0:0:0:28:0%:51:1E0:39:28:22:6:28 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:21:0%:40:1E0:38:21:14:7:21 0/0:0:0:0:0:46:0%:85:1E0:41:46:27:19:47 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:19 0/0:0:0:0:0:36:0%:66:1E0:40:36:23:13:37 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:16:0%:29:1E0:40:16:10:6:16 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:23 0/0:0:0:0:0:20:0%:36:1E0:41:20:16:4:21 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:31:0%:59:1E0:37:31:19:12:31 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:23 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:46 0/0:0:0:0:0:59:0%:99:1E0:40:59:39:20:60 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:40 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:33 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:36 0/0:0:0:0:0:44:0%:81:1E0:39:44:28:16:44 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:16 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:25 0/0:33:1:1:0:18:5.56%:24:5E-1:46:17:8:9:18 0/0:0:0:0:0:48:0%:89:1E0:40:48:28:20:50 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:30 0/0:20:1:1:0:29:3.45%:45:5E-1:41:28:19:9:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:41 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:31:0%:59:1E0:41:31:21:10:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:29 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:43:0%:82:1E0:37:43:30:13:43 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:58:0%:99:1E0:41:58:37:21:61 0/0:0:0:0:0:23:0%:44:1E0:38:23:18:5:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:36 0/0:0:0:0:0:12:0%:21:1E0:51:12:8:4:12 0/0:0:0:0:0:28:0%:51:1E0:45:28:19:9:29 0/0:37:1:1:0:22:4.55%:31:5E-1:41:21:16:5:22 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:25:0%:48:1E0:45:25:16:9:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:36:0%:66:1E0:37:36:24:12:38 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:20 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:18:9:27 0/0:0:0:0:0:16:0%:29:1E0:45:16:14:2:16 0/0:0:0:0:0:36:0%:66:1E0:41:36:26:10:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:20:9:29 0/0:0:0:0:0:40:0%:74:1E0:38:40:28:12:41 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:33 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:34 0/0:0:0:0:0:39:0%:74:1E0:38:39:26:13:40 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:37 0/0:0:0:0:0:32:0%:59:1E0:40:32:23:9:32 0/0:0:0:0:0:30:0%:55:1E0:37:30:21:9:32 0/0:0:0:0:0:22:0%:40:1E0:41:22:18:4:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:36:0%:66:1E0:39:36:25:11:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:29:10:41 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:33 0/0:0:0:0:0:25:0%:48:1E0:38:25:18:7:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:24:12:36 0/0:0:0:0:0:34:0%:62:1E0:37:34:21:13:34 0/0:0:0:0:0:41:0%:78:1E0:40:41:28:13:42 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:49:0%:93:1E0:41:49:32:17:49 0/0:0:0:0:0:54:0%:99:1E0:39:54:23:31:54 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:23 1/1:40:25:14:11:26:96.15%:99:5.4444E-14:38:1:1:0:26 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:33 0/0:0:0:0:0:32:0%:59:1E0:38:32:21:11:34 0/0:0:0:0:0:49:0%:93:1E0:38:49:39:10:50 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:37:0%:70:1E0:38:37:25:12:39 0/0:0:0:0:0:47:0%:89:1E0:39:47:33:14:47 0/0:0:0:0:0:33:0%:63:1E0:38:33:20:13:33 0/0:0:0:0:0:37:0%:70:1E0:37:37:24:13:38 0/0:0:0:0:0:49:0%:93:1E0:38:49:29:20:49 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:35 0/0:0:0:0:0:38:0%:70:1E0:38:38:26:12:40 0/0:0:0:0:0:28:0%:51:1E0:39:28:20:8:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:25:13:38 0/0:0:0:0:0:48:0%:89:1E0:37:48:35:13:48 0/0:0:0:0:0:37:0%:70:1E0:42:37:26:11:37 0/0:0:0:0:0:36:0%:66:1E0:39:36:22:14:36 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:13:15:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:38 0/0:0:0:0:0:25:0%:48:1E0:39:25:17:8:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:54:0%:99:1E0:40:54:31:23:54 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 MTB_anc 3842976 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|PPE57_Rv3425-PPE58_Rv3426|gene3501-gene3502|intergenic_region|gene3501-gene3502|||n.3842976A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:13:34:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:41:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:12:15:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:9:11:21:95.24%:99:4.0873E-11:60:1:1:0:21 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:7:17:25:96%:99:2.0568E-13:39:1:1:0:25 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:30:16:14:31:96.77%:99:6.8754E-17:60:1:0:1:32 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:11:14:27:92.59%:99:2.0853E-13:38:2:1:1:27 1/1:48:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:58:21:37:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:17:9:8:18:94.44%:86:2.0936E-9:34:1:1:0:19 1/1:42:30:14:16:32:93.75%:99:3.0612E-16:39:2:1:1:34 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:37:12:25:38:97.37%:99:5.6582E-21:60:1:0:1:38 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:23:5:18:24:95.83%:99:7.7525E-13:39:1:0:1:24 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:52:17:35:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:31:13:18:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:36:15:21:39:92.31%:99:4.2179E-19:45:3:1:2:39 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:15:12:30:90%:99:4.6134E-14:38:3:2:1:30 1/1:43:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:16:23:40:97.5%:99:3.8137E-22:60:1:1:0:42 1/1:50:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:29:7:22:30:96.67%:99:3.3259E-17:0:0:0:0:32 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:48:11:37:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:28:13:15:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:42:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:56:16:40:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:48:16:32:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:56 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:34:15:19:35:97.14%:99:3.5146E-20:0:0:0:0:36 1/1:40:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:60:28:32:60:100%:99:1.035E-35:0:0:0:0:62 1/1:41:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:50:26:24:51:98.04%:99:9.9117E-30:0:0:0:0:52 1/1:41:61:27:34:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:41:16:25:42:97.62%:99:2.3541E-24:0:0:0:0:43 MTB_anc 3843308 . C A . PASS AC=72;AF=0.240;AN=300;ANN=A|synonymous_variant|LOW|PPE58_Rv3426|gene3502|transcript|Transcript_gene3502|Coding|1/1|c.273C>A|p.Leu91Leu|273/699|273/699|91/232||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3843308C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3843308C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:47:48:23:25:49 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:47:0%:89:1E0:47:47:25:22:48 0/0:0:0:0:0:52:0%:96:1E0:47:52:24:28:53 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:29:0%:55:1E0:50:29:10:19:29 0/0:39:1:0:1:29:3.45%:45:5E-1:47:28:15:13:30 0/0:0:0:0:0:48:0%:89:1E0:49:48:25:23:48 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:50 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:32 0/0:0:0:0:0:51:0%:97:1E0:46:51:32:19:51 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:53:0%:99:1E0:43:53:27:26:54 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:38 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:49:28:15:13:28 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:21:0%:40:1E0:46:21:15:6:22 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:30:0%:55:1E0:49:30:15:15:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:35:2:1:1:63:3.17%:95:2.48E-1:47:61:23:38:64 0/0:0:0:0:0:59:0%:99:1E0:46:59:33:26:59 0/0:0:0:0:0:53:0%:99:1E0:47:53:30:23:53 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:23 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:20 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:15:0%:29:1E0:47:15:8:7:15 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:46:0%:85:1E0:43:46:29:17:46 0/0:0:0:0:0:38:0%:70:1E0:48:38:16:22:39 0/0:0:0:0:0:22:0%:40:1E0:52:22:7:15:22 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:18 0/0:0:0:0:0:37:0%:70:1E0:45:37:25:12:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:33 0/0:0:0:0:0:38:0%:70:1E0:48:38:22:16:39 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:41 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:53:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:16 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 1/1:50:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 1/1:50:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:39:1:0:1:26:3.85%:38:5E-1:47:25:10:15:26 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:39:0%:74:1E0:49:39:20:19:39 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:0:24:0%:44:1E0:53:24:14:10:25 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:18:0%:32:1E0:51:18:7:11:18 1/1:48:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:35:0%:67:1E0:49:35:16:19:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:51:0%:97:1E0:45:51:24:27:51 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:38:0%:70:1E0:46:38:23:15:38 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:25 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:48 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:39 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:61:0%:99:1E0:44:61:29:32:62 1/1:42:61:33:28:61:100%:99:2.609E-36:0:0:0:0:63 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:28 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:31:0%:59:1E0:40:31:21:10:33 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:39 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 1/1:41:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:63:0%:99:1E0:40:63:32:31:63 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:43 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:48:0%:89:1E0:46:48:31:17:48 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:28 1/1:46:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:65:0%:99:1E0:42:65:38:27:66 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:46 MTB_anc 3843407 . CG C . PASS AC=296;AF=0.987;AN=300;ANN=C|frameshift_variant|HIGH|PPE58_Rv3426|gene3502|transcript|Transcript_gene3502|Coding|1/1|c.377delG|p.Gly126fs|377/699|377/699|126/232||INFO_REALIGN_3_PRIME,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3843408delG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3843408delG||||||;LOF=(PPE58_Rv3426|gene3502|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:38:14:24:41:92.68%:99:3.1178E-20:36:3:2:1:41 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:36:21:15:39:92.31%:99:4.2179E-19:35:3:2:1:40 1/1:41:38:20:18:39:95%:99:8.0088E-21:32:2:2:0:40 1/1:48:29:15:14:30:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:51:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:27:10:17:27:96.43%:99:3.7915E-15:34:1:0:1:29 1/1:46:32:12:20:33:96.97%:99:4.7095E-18:27:1:1:0:33 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:30:18:12:31:96.77%:99:6.8754E-17:37:1:1:0:32 1/1:41:42:20:22:41:97.67%:99:6.6289E-24:30:1:1:0:44 1/1:50:29:13:16:30:93.55%:99:1.1344E-15:48:2:2:0:31 1/1:43:45:31:14:45:95.74%:99:7.2338E-25:35:2:0:2:47 1/1:47:20:12:8:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:46:28:13:15:28:96.55%:99:9.9776E-16:60:1:0:1:30 1/1:48:21:12:9:22:95.45%:99:1.0931E-11:33:1:0:1:22 1/1:42:19:9:10:20:95%:98:1.5234E-10:34:1:1:0:20 1/1:45:33:19:14:33:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:43:26:12:14:26:96.3%:99:1.4382E-14:33:1:1:0:27 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:52:27:25:54:96.3%:99:6.1952E-29:46:2:0:2:54 1/1:48:22:16:6:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:15:17:34:94.12%:99:2.2142E-17:35:2:1:1:34 1/1:44:25:11:14:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:11:11:23:95.65%:99:2.9149E-12:34:1:0:1:23 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:30:15:15:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:17:10:7:17:94.44%:93:4.2852E-10:0:0:0:0:17 1/1:42:26:17:9:26:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:46:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:41:17:24:42:97.62%:99:2.5612E-23:31:1:0:1:42 1/1:43:22:12:10:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:27:16:11:28:96.43%:99:3.7915E-15:36:1:0:1:28 1/1:41:28:10:18:31:90.32%:99:1.2857E-14:33:3:1:2:31 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:61:27:34:61:100%:99:2.609E-36:0:0:0:0:61 1/1:46:52:28:24:54:94.55%:99:3.1317E-28:30:3:2:1:55 1/1:41:51:26:25:54:92.73%:99:4.6193E-27:34:4:1:3:55 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:20:11:9:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:42:28:17:11:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:28:16:12:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:45:34:17:17:35:97.14%:99:3.2089E-19:33:1:1:0:35 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:14:17:31:96.88%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:24:17:42:95.35%:99:1.4915E-22:31:2:1:1:43 1/1:47:37:20:17:38:97.37%:99:5.6582E-21:35:1:0:1:38 1/1:52:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:17:20:38:97.37%:99:5.6582E-21:36:1:1:0:38 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:45:26:19:46:97.83%:99:1.1441E-25:34:1:0:1:46 1/1:44:31:13:18:32:96.88%:99:1.8007E-17:33:1:1:0:32 1/1:41:24:11:13:23:96%:99:2.0568E-13:60:1:1:0:25 1/1:44:36:23:13:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:49:26:23:50:98%:99:5.0549E-28:34:1:1:0:50 1/1:41:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:17:16:35:91.67%:99:2.0653E-17:33:3:1:2:36 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:25:12:13:25:96.15%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:23:18:42:95.35%:99:1.4915E-22:47:2:1:1:43 1/1:42:55:30:25:56:93.22%:99:2.4456E-29:45:4:2:2:59 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:42:19:23:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:18:13:5:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:46:23:14:9:24:95.83%:99:7.7525E-13:34:1:0:1:24 0/1:47:23:10:13:26:88.46%:99:7.3681E-12:33:3:2:1:26 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:14:11:26:96.15%:99:5.4444E-14:35:1:0:1:26 0/1:42:20:8:12:24:83.33%:91:6.3493E-10:41:4:3:1:24 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:27:14:13:29:93.1%:99:1.5465E-14:35:2:2:0:29 1/1:46:24:14:10:26:92.31%:99:7.6222E-13:48:2:2:0:26 1/1:48:43:22:21:44:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:43:20:8:12:22:90.91%:98:1.3117E-10:34:2:1:1:22 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:25:14:11:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:21:12:9:21:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:26:13:13:26:96.3%:99:1.4382E-14:32:1:1:0:27 1/1:41:19:11:8:20:95%:98:1.5234E-10:34:1:0:1:20 1/1:44:42:26:16:43:97.67%:99:6.6289E-24:60:1:1:0:43 0/1:43:26:10:16:28:89.66%:99:1.6496E-13:33:3:3:0:29 1/1:42:28:14:14:30:90.32%:99:1.2857E-14:32:3:2:1:31 1/1:45:26:14:12:27:96.3%:99:1.4382E-14:34:1:0:1:28 1/1:43:54:25:29:53:100%:99:4.0229E-32:0:0:0:0:54 0/1:43:23:9:14:25:88.46%:99:7.3681E-12:35:3:2:1:26 1/1:41:29:15:14:28:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:38:24:13:11:24:96%:99:2.0568E-13:34:1:0:1:25 1/1:38:36:24:12:33:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:33:22:11:32:97.06%:99:1.2301E-18:34:1:1:0:34 1/1:44:24:9:15:26:92.31%:99:7.6222E-13:47:2:0:2:26 1/1:44:24:15:9:25:96%:99:2.0568E-13:60:1:1:0:25 1/1:43:27:20:7:28:96.43%:99:3.7915E-15:36:1:1:0:28 1/1:45:24:10:14:23:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:8:16:23:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:16:14:30:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:45:50:18:32:51:98.04%:99:1.3013E-28:35:1:0:1:51 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:12:17:29:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:20:11:9:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:42:42:22:20:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:28:13:15:29:90.32%:99:1.2857E-14:43:3:2:1:32 1/1:38:37:15:22:34:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:37:17:20:37:97.37%:99:5.6582E-21:32:1:0:1:38 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:30:15:15:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:62:31:31:64:96.88%:99:8.9557E-35:33:2:1:1:64 1/1:43:57:31:26:59:96.61%:99:7.5133E-32:35:2:1:1:59 1/1:42:25:15:10:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:19:11:31:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:40:38:22:16:40:95%:99:8.0088E-21:32:2:0:2:40 1/1:38:37:18:19:33:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:47:23:24:48:95.92%:99:5.0044E-26:47:2:1:1:49 1/1:40:40:16:24:43:93.02%:99:2.287E-21:35:3:3:0:43 1/1:41:40:19:21:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:33:16:17:36:91.67%:99:2.0653E-17:34:3:1:2:36 1/1:42:34:24:10:34:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:42:22:20:45:93.33%:99:1.6658E-22:35:3:2:1:45 1/1:42:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:39:16:23:40:97.5%:99:3.8137E-22:35:1:0:1:40 1/1:38:27:17:10:27:93.1%:99:1.5465E-14:35:2:1:1:29 1/1:44:31:16:15:32:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:38:72:43:29:76:94.74%:99:4.2877E-39:33:4:0:4:76 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:43:19:24:45:95.56%:99:1.0412E-23:36:2:1:1:45 1/1:39:33:11:22:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:14:17:33:93.94%:99:8.2416E-17:33:2:1:1:33 1/1:42:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:42:26:16:44:95.45%:99:3.9431E-23:33:2:1:1:44 1/1:40:47:20:27:46:97.92%:99:7.6145E-27:36:1:1:0:48 1/1:38:21:9:12:22:95.45%:99:1.0931E-11:32:1:1:0:22 1/1:42:36:21:15:37:97.3%:99:2.1762E-20:38:1:1:0:37 1/1:44:38:19:19:37:97.44%:99:1.4697E-21:34:1:1:0:39 1/1:42:58:34:24:62:93.55%:99:4.7391E-31:34:4:3:1:62 1/1:43:38:20:18:39:95%:99:8.0088E-21:35:2:1:1:40 MTB_anc 3844756 . GC G . PASS AC=297;AF=0.990;AN=300;ANN=G|frameshift_variant|HIGH|Rv3428c_Rv3428c|gene3504|transcript|Transcript_gene3504|Coding|1/1|c.1214delG|p.Gly405fs|1214/1233|1214/1233|405/410||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3844757delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3844757delC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:46:19:27:47:97.87%:99:2.9526E-26:34:1:1:0:47 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:27:12:15:28:96.43%:99:3.7915E-15:60:1:0:1:28 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:15:12:28:96.43%:99:3.7915E-15:32:1:1:0:28 1/1:50:24:13:11:26:92.31%:99:7.6222E-13:46:2:0:2:26 1/1:49:15:7:8:16:93.75%:75:2.8282E-8:60:1:0:1:16 1/1:46:32:19:13:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:37:26:11:40:92.5%:99:1.1479E-19:34:3:1:2:40 0/1:48:22:16:6:25:88%:99:2.5916E-11:50:3:2:1:25 1/1:46:41:21:20:42:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:52:25:13:12:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:18:14:32:96.97%:99:4.7095E-18:32:1:0:1:33 1/1:44:31:14:17:31:93.94%:99:8.2416E-17:47:2:0:2:33 1/1:41:24:10:14:25:96%:99:2.0568E-13:33:1:1:0:25 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:31:18:13:33:93.94%:99:8.2416E-17:34:2:1:1:33 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:45:20:25:47:95.74%:99:7.2338E-25:36:2:1:1:47 1/1:49:30:11:19:31:96.77%:99:6.8754E-17:32:1:0:1:31 1/1:48:33:14:19:35:94.29%:99:5.9366E-18:33:2:0:2:35 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:30:12:18:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:39:16:9:7:17:94.12%:81:7.7134E-9:35:1:0:1:17 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:18:10:28:96.55%:99:1.3074E-16:0:0:0:0:28 1/1:52:25:13:12:26:96.15%:99:5.4444E-14:37:1:0:1:26 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:32:16:16:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:64:33:31:65:98.46%:99:4.1752E-38:0:0:0:0:65 1/1:45:40:23:17:42:93.02%:99:5.6346E-22:34:2:2:0:42 1/1:47:49:28:21:48:100%:99:3.925E-29:0:0:0:0:49 1/1:42:33:17:16:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:20:9:29:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:18:20:39:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:14:18:33:94.12%:99:2.2142E-17:34:2:2:0:34 1/1:39:32:14:18:33:94.12%:99:2.2142E-17:34:2:1:1:34 1/1:39:31:17:14:32:93.94%:99:8.2416E-17:34:2:1:1:33 1/1:45:39:15:24:39:95.12%:99:3.8137E-22:33:1:1:0:40 1/1:55:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:15:14:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:31:13:18:31:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:41:33:12:21:35:94.29%:99:5.9366E-18:46:2:1:1:35 1/1:45:22:13:9:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:35:19:16:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:41:20:21:41:97.62%:99:2.3541E-24:0:0:0:0:42 0/1:41:26:12:14:29:89.66%:99:1.6496E-13:32:3:2:1:29 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:48:24:24:48:97.96%:99:1.9625E-27:32:1:0:1:49 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:29:9:20:29:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:46:57:32:25:57:95%:99:7.5133E-32:33:2:0:2:59 1/1:44:29:15:14:28:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:19:9:10:19:95%:98:1.5234E-10:34:1:0:1:20 1/1:41:40:21:19:41:95.24%:99:5.6346E-22:32:2:0:2:42 1/1:48:34:17:17:34:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:46:34:16:18:35:97.14%:99:3.2089E-19:34:1:1:0:35 1/1:49:33:23:10:34:97.06%:99:1.2301E-18:60:1:0:1:34 1/1:41:44:23:21:44:95.65%:99:2.7459E-24:31:2:1:1:47 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:17:9:27:92.86%:99:5.6872E-14:35:2:2:0:28 1/1:44:29:13:16:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:45:33:17:16:34:97.06%:99:1.2301E-18:32:1:0:1:34 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:16:15:31:96.88%:99:1.8007E-17:32:1:1:0:32 1/1:42:32:17:15:33:96.97%:99:4.7095E-18:33:1:0:1:33 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:41:22:19:42:97.62%:99:2.5612E-23:25:1:1:0:42 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:24:15:9:23:100%:99:3.101E-14:0:0:0:0:24 1/1:37:39:13:26:38:97.5%:99:3.8137E-22:33:1:1:0:40 1/1:44:27:17:10:29:93.1%:99:1.5465E-14:32:2:2:0:29 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:29:17:12:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:17:16:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:21:16:37:97.37%:99:5.6582E-21:33:1:0:1:39 1/1:40:24:13:11:26:92.31%:99:7.6222E-13:34:2:0:2:26 1/1:44:27:11:16:28:96.43%:99:3.7915E-15:34:1:0:1:28 1/1:46:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:19:13:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:26:15:11:23:96.3%:99:1.4382E-14:36:1:1:0:27 1/1:41:24:14:10:23:100%:99:3.101E-14:0:0:0:0:24 1/1:45:26:13:13:28:92.86%:99:5.6872E-14:60:2:0:2:28 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:7:18:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:22:15:39:94.87%:99:3.0128E-20:47:2:1:1:39 1/1:41:26:14:12:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:26:17:9:26:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:11:16:28:93.1%:99:1.5465E-14:33:2:2:0:29 1/1:40:37:22:15:38:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:39:40:19:21:42:95.24%:99:5.6346E-22:32:2:0:2:42 0/1:41:22:14:8:25:88%:99:2.5916E-11:48:3:1:2:25 1/1:44:45:20:25:48:93.75%:99:3.2362E-24:34:3:2:1:48 1/1:39:21:11:10:20:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:43:40:20:20:42:95.24%:99:5.6346E-22:33:2:1:1:42 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:30:17:13:30:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:41:23:14:9:23:95.83%:99:1.2146E-13:0:0:0:0:23 1/1:39:53:30:23:55:96.36%:99:1.6199E-29:46:2:2:0:55 1/1:41:40:19:21:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:21:14:36:97.22%:99:8.3613E-20:32:1:0:1:36 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:42:18:24:39:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:23:17:6:24:95.83%:99:7.7525E-13:29:1:0:1:24 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:22:12:35:97.14%:99:3.2089E-19:29:1:1:0:35 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:39:23:16:40:92.86%:99:8.4519E-21:42:3:2:1:42 1/1:37:23:15:8:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:16:21:39:94.87%:99:3.0128E-20:34:2:1:1:39 1/1:38:55:28:27:56:96.49%:99:1.1048E-30:46:2:1:1:57 1/1:42:45:21:24:44:97.83%:99:1.1441E-25:34:1:0:1:46 1/1:40:34:16:18:34:94.44%:99:1.5887E-18:46:2:0:2:36 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:35:14:21:36:97.22%:99:8.3613E-20:33:1:0:1:36 1/1:38:25:11:14:25:96.15%:99:5.4444E-14:32:1:0:1:26 1/1:44:29:19:10:30:93.55%:99:1.1344E-15:34:2:0:2:31 1/1:39:30:15:15:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:15:13:28:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:46:37:17:20:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:63:24:39:61:100%:99:1.657E-37:0:0:0:0:63 1/1:44:38:22:16:39:97.44%:99:1.4697E-21:34:1:0:1:39 MTB_anc 3845161 . G C . PASS AC=4;AF=0.013;AN=300;ANN=C|synonymous_variant|LOW|Rv3428c_Rv3428c|gene3504|transcript|Transcript_gene3504|Coding|1/1|c.810C>G|p.Thr270Thr|810/1233|810/1233|270/410||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3845161G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3845161G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:45:50:25:25:50 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:58:0%:99:1E0:46:58:33:25:58 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:45 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:35:0%:67:1E0:46:35:25:10:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:42 0/0:0:0:0:0:23:0%:44:1E0:52:23:10:13:23 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:28 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:41 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:20 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:49 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:14:0%:25:1E0:48:14:6:8:14 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:37 0/0:0:0:0:0:56:0%:99:1E0:42:56:34:22:57 0/0:0:0:0:0:20:0%:36:1E0:51:20:11:9:21 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:39 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:39 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:39 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:29 0/0:0:0:0:0:24:0%:44:1E0:50:24:8:16:24 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:40:41:27:14:41 0/0:0:0:0:0:55:0%:99:1E0:46:55:26:29:55 0/0:0:0:0:0:51:0%:97:1E0:48:51:30:21:51 0/0:0:0:0:0:48:0%:89:1E0:46:48:29:19:48 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:18:0%:32:1E0:46:18:4:14:18 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:47 0/0:0:0:0:0:50:0%:92:1E0:42:50:27:23:51 0/0:60:1:0:1:29:3.45%:45:5E-1:46:28:17:11:29 0/0:0:0:0:0:30:0%:55:1E0:53:30:16:14:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:38 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:55:0%:99:1E0:42:55:31:24:55 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:47 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:44 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:33 0/0:0:0:0:0:45:0%:85:1E0:44:45:19:26:45 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:31 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:53:0%:99:1E0:42:53:16:37:53 0/0:0:0:0:0:24:0%:44:1E0:43:24:5:19:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:11:21:32 0/0:0:0:0:0:31:0%:59:1E0:49:31:22:9:31 0/0:60:1:1:0:29:3.45%:45:5E-1:46:28:15:13:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:31:0%:59:1E0:51:31:17:14:31 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:54 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:33 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:45 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:43:0%:82:1E0:47:43:18:25:43 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:21:0%:40:1E0:53:21:14:7:21 0/0:0:0:0:0:46:0%:85:1E0:44:46:29:17:46 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:27 0/0:0:0:0:0:52:0%:96:1E0:42:52:24:28:52 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:41 0/0:0:0:0:0:46:0%:85:1E0:40:46:27:19:46 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:26 0/0:0:0:0:0:40:0%:74:1E0:46:40:21:19:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:31 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:17:6:24 0/0:38:1:1:0:29:3.45%:45:5E-1:43:28:15:13:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:46:0%:85:1E0:45:46:25:21:46 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:43:0%:82:1E0:46:43:17:26:44 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:46 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:48:0%:89:1E0:40:48:21:27:51 0/0:0:0:0:0:44:0%:81:1E0:40:44:29:15:45 0/0:0:0:0:0:27:0%:52:1E0:42:27:9:18:30 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:33 0/0:0:0:0:0:63:0%:99:1E0:43:63:31:32:63 0/0:0:0:0:0:54:0%:99:1E0:40:54:30:24:54 0/0:38:1:0:1:35:2.86%:55:5E-1:43:34:13:21:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:53:0%:99:1E0:38:53:31:22:53 0/0:30:1:1:0:37:2.7%:59:5E-1:40:36:14:22:37 0/0:0:0:0:0:49:0%:93:1E0:38:49:25:24:49 0/0:0:0:0:0:41:0%:78:1E0:37:41:21:20:42 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:43 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:29 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:41 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:55 0/0:0:0:0:0:45:0%:85:1E0:40:45:28:17:45 0/0:0:0:0:0:44:0%:81:1E0:42:44:25:19:44 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:36 0/0:0:0:0:0:54:0%:99:1E0:39:54:27:27:56 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:23:14:38 0/0:0:0:0:0:42:0%:77:1E0:37:42:20:22:44 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:16:26:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:41 0/0:38:1:1:0:31:3.23%:48:5E-1:44:30:15:15:31 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:31 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:57:0%:99:1E0:40:57:29:28:59 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:36 MTB_anc 3845328 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv3428c_Rv3428c|gene3504|transcript|Transcript_gene3504|Coding|1/1|c.643G>A|p.Val215Met|643/1233|643/1233|215/410||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3845328C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3845328C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:46:11:35:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:40:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:60:29:31:60:100%:99:1.035E-35:0:0:0:0:64 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:40 MTB_anc 3845695 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv3428c_Rv3428c|gene3504|transcript|Transcript_gene3504|Coding|1/1|c.276A>G|p.Arg92Arg|276/1233|276/1233|92/410||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3845695T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3845695T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:16:8:8:17:94.12%:81:7.7134E-9:60:1:1:0:18 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:18:8:10:19:94.74%:92:5.6585E-10:32:1:0:1:19 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:61:31:30:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:39:22:17:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 MTB_anc 3846843 . CA C . PASS AC=52;AF=0.176;AN=296;ANN=C|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846844delA||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:43:7:3:4:18:38.89%:24:3.8123E-3:37:11:7:4:19 0/0:60:3:0:3:14:21.43%:9:1.1111E-1:40:11:7:4:14 0/1:47:11:5:6:33:33.33%:37:1.8019E-4:40:22:15:7:33 0/0:49:2:1:1:22:9.09%:24:2.4419E-1:40:20:11:9:22 0/1:45:9:1:8:19:47.37%:32:5.667E-4:38:10:8:2:19 0/0:50:5:3:2:18:27.78%:8:2.2727E-2:38:13:12:1:18 0/0:43:4:2:2:14:28.57%:6:4.8889E-2:42:10:6:4:14 0/1:46:8:4:4:19:42.11%:28:1.5455E-3:40:11:9:2:19 0/0:44:3:2:1:24:12.5%:22:1.1702E-1:39:21:15:6:24 0/1:42:9:5:4:24:37.5%:31:7.7962E-4:42:15:10:5:24 0/0:52:4:2:2:18:22.22%:10:5.1948E-2:37:14:10:4:20 0/0:51:5:3:2:22:22.73%:12:2.4248E-2:38:17:13:4:22 0/0:49:2:0:2:13:15.38%:13:2.4E-1:41:11:8:3:13 0/1:46:9:5:4:24:37.5%:31:7.7962E-4:42:15:12:3:24 0/1:50:7:2:5:18:38.89%:24:3.8123E-3:40:11:9:2:18 0/1:44:8:4:4:24:33.33%:27:1.949E-3:38:16:9:7:24 0/0:46:5:1:4:21:23.81%:12:2.3921E-2:41:16:12:4:21 0/0:60:1:1:0:11:9.09%:14:5E-1:36:10:7:3:11 0/0:46:5:1:4:14:35.71%:4:2.037E-2:38:9:9:0:14 0/0:45:3:2:1:12:25%:6:1.087E-1:43:9:8:1:12 0/0:48:4:3:1:16:25%:8:5.0612E-2:39:12:9:3:16 0/1:43:7:2:5:23:30.43%:23:4.5803E-3:41:16:13:3:23 0/0:37:2:0:2:13:15.38%:13:2.4E-1:37:11:6:5:13 0/1:40:7:3:4:21:33.33%:23:4.3101E-3:39:14:11:3:21 0/0:45:3:1:2:13:23.08%:9:1.1E-1:37:10:6:4:13 0/0:41:5:2:3:22:22.73%:12:2.4248E-2:41:17:11:6:23 0/0:46:5:2:3:17:29.41%:8:2.2239E-2:41:12:7:5:17 0/0:38:2:1:1:14:14.29%:12:2.4074E-1:39:12:5:7:14 0/0:54:4:2:2:14:28.57%:6:4.8889E-2:44:10:6:4:15 0/0:45:3:1:2:11:27.27%:7:1.0714E-1:37:8:5:3:11 0/0:49:4:2:2:17:23.53%:11:5.132E-2:41:13:9:4:17 0/0:37:2:1:1:10:20%:7:2.3684E-1:37:8:4:4:10 0/1:46:9:5:4:18:50%:32:5.1645E-4:36:9:5:4:18 0/0:38:2:1:1:15:13.33%:16:2.4138E-1:39:13:9:4:15 0/0:38:4:1:3:19:21.05%:10:5.1948E-2:40:14:9:5:20 0/0:43:4:2:2:26:15.38%:20:5.5222E-2:40:22:16:6:26 0/1:41:7:3:4:24:29.17%:23:4.7006E-3:38:17:11:6:24 0/1:46:14:4:10:41:34.15%:47:1.6028E-5:43:27:16:11:42 0/1:42:8:5:3:34:23.53%:26:2.4562E-3:37:26:19:7:34 0/1:42:8:4:4:21:38.1%:27:1.7241E-3:39:13:5:8:21 0/0:35:5:2:3:18:27.78%:8:2.2727E-2:41:13:11:2:18 0/0:38:3:2:1:15:20%:11:1.1207E-1:39:12:8:4:15 0/0:45:5:3:2:12:41.67%:3:1.8634E-2:37:7:5:2:12 0/0:42:5:3:2:13:38.46%:4:1.9565E-2:37:8:6:2:13 0/0:48:2:2:0:13:15.38%:13:2.4E-1:37:11:7:4:13 0/0:43:4:1:3:12:33.33%:4:4.6584E-2:36:8:6:2:12 0/0:37:3:1:2:14:21.43%:9:1.1111E-1:37:11:8:3:14 0/0:36:4:0:4:23:17.39%:18:5.4264E-2:41:19:11:8:23 0/0:51:5:4:1:19:26.32%:8:2.2727E-2:37:13:9:4:19 0/1:50:12:6:6:28:42.86%:42:5.4482E-5:39:16:11:5:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:41:6:2:4:21:28.57%:9:1.0344E-2:43:15:10:5:21 0/1:40:6:4:2:16:40%:20:8.4291E-3:37:9:7:2:16 0/0:40:6:0:6:21:28.57%:9:1.0344E-2:40:15:14:1:21 0/0:37:3:2:1:16:18.75%:11:1.129E-1:40:13:9:4:16 0/0:60:2:1:1:14:14.29%:12:2.4074E-1:37:12:11:1:14 0/1:46:7:2:5:23:30.43%:23:4.5803E-3:42:16:11:5:23 0/0:49:2:0:2:12:16.67%:10:2.3913E-1:44:10:8:2:12 0/1:44:7:3:4:19:36.84%:23:3.9926E-3:42:12:8:4:19 0/0:48:2:1:1:17:11.76%:18:2.4242E-1:38:15:13:2:17 0/0:52:3:1:2:16:18.75%:11:1.129E-1:41:13:9:4:16 0/0:48:4:2:2:20:20%:13:5.3015E-2:37:16:12:4:20 0/0:37:4:1:3:15:26.67%:8:4.9808E-2:39:11:8:3:15 0/1:46:7:4:3:17:41.18%:24:3.6151E-3:40:10:9:1:17 0/0:47:4:3:1:12:33.33%:4:4.6584E-2:40:8:6:2:12 0/1:49:9:4:5:32:28.12%:29:1.0185E-3:41:23:14:9:32 0/1:42:7:3:4:21:33.33%:23:4.3101E-3:37:14:6:8:21 0/0:54:4:1:3:18:22.22%:10:5.1948E-2:44:14:12:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:45:3:2:1:13:23.08%:9:1.1E-1:41:10:7:3:13 0/1:48:6:2:4:17:35.29%:20:9.2021E-3:40:11:9:2:17 0/0:45:3:1:2:13:23.08%:9:1.1E-1:44:10:7:3:13 0/0:48:6:2:4:22:27.27%:9:1.057E-2:38:16:13:3:22 0/0:54:4:4:0:19:21.05%:13:5.251E-2:42:15:10:5:20 0/0:38:1:1:0:17:5.88%:24:5E-1:37:16:13:3:17 0/0:60:2:1:1:14:14.29%:12:2.4074E-1:37:12:8:4:14 0/1:41:6:1:5:15:40%:20:8.4291E-3:37:9:6:3:15 0/0:51:5:3:2:16:31.25%:6:2.1691E-2:41:11:9:2:16 0/0:37:5:2:3:23:21.74%:14:2.4548E-2:39:18:13:5:23 0/0:43:3:1:2:14:21.43%:9:1.1111E-1:37:11:10:1:14 0/0:49:2:2:0:15:13.33%:16:2.4138E-1:39:13:9:4:15 0/1:40:7:3:4:24:29.17%:23:4.7006E-3:39:17:14:3:24 0/0:37:3:2:1:12:25%:6:1.087E-1:40:9:4:5:12 0/1:44:7:3:4:12:58.33%:26:2.2883E-3:35:5:4:1:12 0/0:41:5:3:2:15:33.33%:6:2.1073E-2:37:10:7:3:15 0/0:37:4:1:3:13:30.77%:6:4.7826E-2:36:9:6:3:13 0/0:43:4:0:4:19:21.05%:13:5.251E-2:39:15:10:5:19 0/1:48:10:4:6:22:45.45%:35:2.6061E-4:41:12:7:5:22 0/0:51:5:2:3:22:22.73%:12:2.4248E-2:41:17:14:3:22 0/0:45:3:2:1:14:21.43%:9:1.1111E-1:39:11:7:4:14 0/1:43:7:2:5:17:41.18%:24:3.6151E-3:44:10:6:4:17 0/0:46:2:1:1:12:16.67%:10:2.3913E-1:39:10:7:3:12 0/0:47:4:1:3:24:16.67%:18:5.461E-2:35:20:17:3:24 0/1:46:7:3:4:21:33.33%:23:4.3101E-3:39:14:11:3:21 0/1:43:14:8:6:30:46.67%:50:8.3837E-6:40:16:11:5:30 0/0:60:2:2:0:11:18.18%:10:2.381E-1:37:9:4:5:12 0/0:51:5:3:2:15:33.33%:6:2.1073E-2:37:10:8:2:16 0/0:48:2:0:2:18:11.11%:18:2.4286E-1:41:16:12:4:18 0/0:38:2:1:1:21:9.52%:25:2.439E-1:39:19:15:4:21 0/1:40:6:4:2:15:40%:20:8.4291E-3:40:9:6:3:15 0/0:60:3:1:2:13:23.08%:9:1.1E-1:37:10:3:7:13 0/1:47:11:4:7:28:39.29%:38:1.4422E-4:39:17:13:4:28 0/0:50:3:0:3:10:30%:4:1.0526E-1:39:7:6:1:11 0/0:40:5:1:4:20:25%:10:2.3562E-2:41:15:7:8:20 0/1:50:7:5:2:21:33.33%:23:4.3101E-3:39:14:10:4:21 0/1:41:6:1:5:10:60%:22:5.418E-3:38:4:3:1:10 0/0:45:3:1:2:12:25%:6:1.087E-1:36:9:5:4:12 0/0:44:3:1:2:18:16.67%:14:1.1429E-1:40:15:11:4:19 0/0:45:6:3:3:20:30%:7:1.0098E-2:42:14:6:8:20 0/1:40:7:4:3:24:29.17%:23:4.7006E-3:38:17:12:5:24 0/1:44:12:4:8:18:66.67%:48:1.4831E-5:37:6:4:2:18 0/1:40:7:3:4:21:33.33%:23:4.3101E-3:39:14:9:5:22 0/0:45:5:3:2:20:25%:10:2.3562E-2:36:15:11:4:21 0/1:40:9:1:8:26:34.62%:30:8.4928E-4:37:17:12:5:26 0/0:38:2:0:2:10:20%:7:2.3684E-1:40:8:4:4:10 0/0:50:5:2:3:29:17.24%:22:2.5917E-2:38:24:16:8:30 0/0:38:1:0:1:14:7.14%:17:5E-1:38:13:10:3:14 0/0:35:3:1:2:23:13.04%:22:1.1667E-1:38:20:14:6:23 0/0:48:6:3:3:20:30%:7:1.0098E-2:37:14:12:2:20 0/1:46:9:5:4:43:20.93%:29:1.2263E-3:37:34:26:8:43 0/1:39:10:5:5:34:29.41%:33:4.51E-4:37:24:22:2:34 0/0:49:4:1:3:15:26.67%:8:4.9808E-2:41:11:7:4:15 0/0:42:4:1:3:14:28.57%:6:4.8889E-2:36:10:7:3:14 0/0:48:2:1:1:26:7.69%:30:2.451E-1:37:24:19:5:30 0/0:37:2:0:2:15:13.33%:16:2.4138E-1:37:13:7:6:15 0/1:46:10:6:4:31:32.26%:33:4.1251E-4:36:21:14:7:31 0/0:48:6:2:4:26:23.08%:13:1.1309E-2:37:20:15:5:26 0/0:37:5:1:4:21:23.81%:12:2.3921E-2:37:16:9:7:22 0/0:60:5:4:1:21:23.81%:12:2.3921E-2:37:16:10:6:21 0/0:49:2:1:1:19:10.53%:21:2.4324E-1:39:17:11:6:19 0/0:41:4:3:1:16:25%:8:5.0612E-2:36:12:8:4:16 0/1:44:9:4:5:31:29.03%:30:9.9376E-4:39:22:19:3:31 0/1:45:7:3:4:20:35%:23:4.158E-3:36:13:12:1:20 0/0:34:4:3:1:19:21.05%:13:5.251E-2:36:15:9:6:19 0/1:44:9:3:6:29:31.03%:30:9.4048E-4:37:20:15:5:29 0/0:42:6:2:4:23:26.09%:11:1.0777E-2:37:17:14:3:23 0/1:37:8:1:7:43:18.6%:25:2.7329E-3:38:35:28:7:43 0/1:46:7:3:4:30:23.33%:22:5.2713E-3:38:23:14:9:30 0/1:41:11:4:7:27:40.74%:38:1.362E-4:37:16:16:0:27 0/1:38:7:3:4:26:26.92%:23:4.9169E-3:38:19:12:7:27 0/1:48:6:4:2:19:31.58%:20:9.828E-3:39:13:11:2:19 0/0:43:4:2:2:13:30.77%:6:4.7826E-2:37:9:7:2:13 0/0:45:3:2:1:17:17.65%:14:1.1364E-1:38:14:9:5:17 0/0:41:5:2:3:18:27.78%:8:2.2727E-2:39:13:10:3:18 0/0:45:3:2:1:21:14.29%:19:1.1585E-1:38:18:14:4:21 0/1:55:6:3:3:16:37.5%:20:8.837E-3:37:10:8:2:18 0/0:54:4:3:1:12:33.33%:4:4.6584E-2:37:8:5:3:12 0/1:44:10:4:6:33:30.3%:33:4.3872E-4:37:23:16:7:33 0/1:43:11:4:7:36:30.56%:37:1.9879E-4:37:25:17:8:36 0/0:38:3:1:2:19:15.79%:17:1.1486E-1:40:16:13:3:19 MTB_anc 3846845 . A G . PASS AC=67;AF=0.632;AN=106;ANN=G|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846845A>G||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:43:11:5:6:14:78.57%:47:1.6951E-5:36:3:1:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:42:8:4:4:9:88.89%:36:2.0568E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:8:5:3:9:88.89%:36:2.0568E-4:39:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:46:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:47:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:39:8:4:4:9:88.89%:36:2.0568E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:45:9:5:4:11:81.82%:39:1.1057E-4:34:2:1:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:43:14:4:10:16:87.5%:65:2.5454E-7:47:2:1:1:16 0/1:42:8:5:3:10:80%:34:3.5723E-4:35:2:1:1:10 1/1:41:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:44:12:6:6:13:92.31%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 0/1:39:6:2:4:9:66.67%:23:4.5249E-3:36:3:2:1:9 0/1:36:6:4:2:8:85.71%:26:2.331E-3:33:1:0:1:8 0/1:41:6:0:6:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:39:7:2:5:9:77.78%:29:1.1312E-3:48:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:44:7:3:4:8:87.5%:31:6.993E-4:60:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:45:7:4:3:8:87.5%:31:6.993E-4:33:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:42:7:3:4:9:77.78%:29:1.1312E-3:38:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:6:2:4:7:85.71%:26:2.331E-3:34:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:7:3:4:12:58.33%:26:2.2883E-3:35:5:4:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:47:10:4:6:13:76.92%:42:5.3843E-5:43:3:3:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:7:2:5:8:87.5%:31:6.993E-4:34:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:47:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 1/1:41:14:8:6:15:93.33%:69:1.0315E-7:38:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:40:6:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:10:4:6:12:83.33%:44:3.3652E-5:36:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:50:7:5:2:8:87.5%:31:6.993E-4:36:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:40:7:4:3:8:87.5%:31:6.993E-4:38:1:0:1:8 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:9:1:8:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:48:6:3:3:7:85.71%:26:2.331E-3:33:1:1:0:7 1/1:43:9:5:4:10:90%:42:5.9538E-5:35:1:1:0:10 0/1:39:10:5:5:15:66.67%:40:9.995E-5:37:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:10:6:4:12:83.33%:44:3.3652E-5:36:2:2:0:12 0/1:44:6:2:4:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:9:4:5:13:69.23%:36:2.2883E-4:34:4:4:0:13 0/1:42:7:3:4:9:77.78%:29:1.1312E-3:37:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:9:3:6:10:90%:42:5.9538E-5:30:1:1:0:10 0/1:42:6:2:4:8:75%:24:3.4965E-3:36:2:2:0:8 0/1:37:8:1:7:14:57.14%:30:9.6618E-4:37:6:5:1:14 0/1:46:7:3:4:8:87.5%:31:6.993E-4:36:1:1:0:8 0/1:38:10:4:6:12:83.33%:44:3.3652E-5:35:2:2:0:13 0/1:37:7:3:4:9:77.78%:29:1.1312E-3:35:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:54:6:3:3:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:43:10:4:6:12:83.33%:44:3.3652E-5:38:2:2:0:12 0/1:41:11:4:7:17:64.71%:43:4.3258E-5:37:6:5:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3846846 . A C . PASS AC=70;AF=0.660;AN=106;ANN=C|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846846A>C||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:42:11:5:6:14:78.57%:47:1.6951E-5:38:3:1:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:8:4:4:9:88.89%:36:2.0568E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:43:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:39:8:4:4:9:88.89%:36:2.0568E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:46:9:5:4:11:81.82%:39:1.1057E-4:36:2:1:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:45:14:4:10:17:82.35%:63:4.8851E-7:43:3:2:1:17 0/1:41:8:5:3:10:80%:34:3.5723E-4:34:2:1:1:10 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:44:12:6:6:13:92.31%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 0/1:40:6:2:4:9:66.67%:23:4.5249E-3:36:3:2:1:9 0/1:36:6:4:2:8:85.71%:26:2.331E-3:32:1:0:1:8 0/1:40:6:0:6:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:40:7:2:5:9:77.78%:29:1.1312E-3:47:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:42:7:3:4:8:87.5%:31:6.993E-4:60:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:45:7:4:3:8:87.5%:31:6.993E-4:33:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:43:7:3:4:9:77.78%:29:1.1312E-3:37:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:6:2:4:7:85.71%:26:2.331E-3:34:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:3:4:12:58.33%:26:2.2883E-3:35:5:4:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:49:9:4:5:12:75%:37:1.6826E-4:43:3:3:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:7:2:5:8:87.5%:31:6.993E-4:34:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:45:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 1/1:42:14:8:6:15:93.33%:69:1.0315E-7:38:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:39:6:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:40:11:4:7:13:84.62%:49:1.0096E-5:36:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:50:7:5:2:8:87.5%:31:6.993E-4:36:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:7:4:3:8:87.5%:31:6.993E-4:38:1:0:1:8 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:40:9:1:8:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:39:6:3:3:7:85.71%:26:2.331E-3:33:1:1:0:7 1/1:43:9:5:4:10:90%:42:5.9538E-5:33:1:1:0:10 0/1:39:10:5:5:15:66.67%:40:9.995E-5:36:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:10:6:4:12:83.33%:44:3.3652E-5:37:2:2:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:42:8:3:5:11:72.73%:32:5.16E-4:37:3:3:0:13 0/1:43:7:3:4:9:77.78%:29:1.1312E-3:37:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 0/1:42:6:2:4:8:75%:24:3.4965E-3:38:2:2:0:8 0/1:37:8:1:7:14:57.14%:30:9.6618E-4:36:6:5:1:14 0/1:44:7:3:4:8:87.5%:31:6.993E-4:36:1:1:0:8 1/1:36:11:4:7:12:91.67%:53:4.8074E-6:38:1:1:0:13 0/1:40:7:3:4:10:70%:28:1.548E-3:34:3:3:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:56:6:3:3:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:44:10:4:6:12:83.33%:44:3.3652E-5:38:2:2:0:12 0/1:40:11:4:7:18:61.11%:42:5.2969E-5:36:7:5:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3846851 . G A . PASS AC=71;AF=0.634;AN=112;ANN=A|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846851G>A||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:42:11:5:6:14:78.57%:47:1.6951E-5:38:3:1:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:4:4:9:88.89%:36:2.0568E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:9:5:4:10:90%:42:5.9538E-5:35:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:43:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:42:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:39:8:4:4:10:80%:34:3.5723E-4:36:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:42:9:5:4:11:81.82%:39:1.1057E-4:38:2:1:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:42:14:4:10:17:82.35%:63:4.8851E-7:43:3:2:1:17 0/1:43:8:5:3:10:80%:34:3.5723E-4:38:2:1:1:10 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:44:12:6:6:13:92.31%:58:1.3461E-6:60:1:1:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:41:6:2:4:9:66.67%:23:4.5249E-3:36:3:2:1:9 0/1:38:6:4:2:8:75%:24:3.4965E-3:36:2:1:1:8 0/1:41:6:0:6:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:2:5:9:77.78%:29:1.1312E-3:46:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:44:7:3:4:8:87.5%:31:6.993E-4:60:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:44:7:4:3:8:87.5%:31:6.993E-4:33:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:4:5:10:90%:42:5.9538E-5:35:1:1:0:10 0/1:40:7:3:4:10:70%:28:1.548E-3:33:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:2:4:7:85.71%:26:2.331E-3:34:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:3:4:13:53.85%:25:2.6087E-3:35:6:5:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:44:10:4:6:13:76.92%:42:5.3843E-5:43:3:3:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:2:5:8:87.5%:31:6.993E-4:34:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:44:7:3:4:9:77.78%:29:1.1312E-3:35:2:1:1:9 1/1:39:14:8:6:15:93.33%:69:1.0315E-7:38:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:39:11:4:7:13:84.62%:49:1.0096E-5:36:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:50:7:5:2:8:87.5%:31:6.993E-4:34:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:4:3:8:87.5%:31:6.993E-4:38:1:0:1:8 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:40:9:1:8:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:46:5:2:3:11:45.45%:3:1.7544E-2:36:6:5:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:3:3:7:85.71%:26:2.331E-3:33:1:1:0:7 1/1:39:9:5:4:10:90%:42:5.9538E-5:38:1:1:0:10 0/1:39:10:5:5:15:66.67%:40:9.995E-5:37:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:42:10:6:4:12:83.33%:44:3.3652E-5:36:2:2:0:12 0/1:37:6:2:4:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:42:9:4:5:13:69.23%:36:2.2883E-4:37:4:4:0:13 0/1:43:7:3:4:9:77.78%:29:1.1312E-3:35:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:3:6:10:90%:42:5.9538E-5:36:1:1:0:10 0/1:41:6:2:4:8:75%:24:3.4965E-3:38:2:2:0:8 0/1:37:8:1:7:13:61.54%:30:8.238E-4:38:5:4:1:14 0/1:37:7:3:4:8:87.5%:31:6.993E-4:36:1:1:0:8 0/1:37:11:4:7:13:84.62%:49:1.0096E-5:33:2:2:0:13 0/1:39:7:3:4:11:63.64%:27:1.935E-3:36:4:3:1:11 0/1:44:6:4:2:7:85.71%:26:2.331E-3:34:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:48:6:3:3:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:42:10:4:6:12:83.33%:44:3.3652E-5:37:2:2:0:12 0/1:40:11:4:7:18:61.11%:42:5.2969E-5:37:7:5:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3846852 . C G . PASS AC=68;AF=0.630;AN=108;ANN=G|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846852C>G||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:11:5:6:14:78.57%:47:1.6951E-5:38:3:1:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:4:4:9:88.89%:36:2.0568E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:38:9:5:4:10:90%:42:5.9538E-5:35:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:44:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:40:8:4:4:10:80%:34:3.5723E-4:36:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:43:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:41:9:5:4:12:75%:37:1.6826E-4:36:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:41:14:4:10:17:82.35%:63:4.8851E-7:42:3:2:1:17 0/1:40:8:5:3:10:80%:34:3.5723E-4:36:2:1:1:10 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:43:12:6:6:13:92.31%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:41:6:2:4:9:66.67%:23:4.5249E-3:36:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:41:6:0:6:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:2:5:10:70%:28:1.548E-3:41:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:43:7:3:4:8:87.5%:31:6.993E-4:60:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:41:7:4:3:8:87.5%:31:6.993E-4:33:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:4:5:10:90%:42:5.9538E-5:35:1:1:0:10 0/1:40:7:3:4:10:70%:28:1.548E-3:35:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:2:4:7:85.71%:26:2.331E-3:34:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:3:4:13:53.85%:25:2.6087E-3:37:6:5:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:44:10:4:6:13:76.92%:42:5.3843E-5:43:3:3:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:2:5:8:87.5%:31:6.993E-4:34:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:42:7:3:4:9:77.78%:29:1.1312E-3:35:2:1:1:9 1/1:39:14:8:6:15:93.33%:69:1.0315E-7:38:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:11:4:7:13:84.62%:49:1.0096E-5:38:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:50:7:5:2:8:87.5%:31:6.993E-4:34:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:4:3:8:87.5%:31:6.993E-4:38:1:0:1:8 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:40:9:1:8:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:46:5:2:3:11:45.45%:3:1.7544E-2:34:6:5:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:9:5:4:10:90%:42:5.9538E-5:38:1:1:0:10 0/1:39:10:5:5:15:66.67%:40:9.995E-5:37:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:42:10:6:4:12:83.33%:44:3.3652E-5:36:2:2:0:12 0/1:36:6:2:4:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:42:9:4:5:13:69.23%:36:2.2883E-4:35:4:4:0:13 0/1:43:7:3:4:9:77.78%:29:1.1312E-3:37:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:7:2:5:8:87.5%:31:6.993E-4:34:1:1:0:10 0/1:41:6:2:4:9:66.67%:23:4.5249E-3:36:3:3:0:9 0/1:38:8:1:7:14:57.14%:30:9.6618E-4:37:6:5:1:14 0/1:37:7:3:4:8:87.5%:31:6.993E-4:36:1:1:0:8 0/1:37:11:4:7:13:84.62%:49:1.0096E-5:37:2:2:0:13 0/1:40:7:3:4:10:70%:28:1.548E-3:36:3:2:1:11 0/1:44:6:4:2:7:85.71%:26:2.331E-3:34:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:45:6:3:3:7:85.71%:26:2.331E-3:34:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:10:4:6:12:83.33%:44:3.3652E-5:38:2:2:0:12 0/1:38:11:4:7:18:61.11%:42:5.2969E-5:37:7:5:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3846853 . T C . PASS AC=70;AF=0.625;AN=112;ANN=C|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846853T>C||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:40:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:11:5:6:13:84.62%:49:1.0096E-5:37:2:1:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:4:4:9:88.89%:36:2.0568E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:38:9:5:4:10:90%:42:5.9538E-5:35:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:43:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:44:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:40:8:4:4:10:80%:34:3.5723E-4:36:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:43:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:41:9:5:4:12:75%:37:1.6826E-4:36:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:40:14:4:10:17:82.35%:63:4.8851E-7:44:3:2:1:17 0/1:40:8:5:3:10:80%:34:3.5723E-4:35:2:1:1:10 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:43:12:6:6:13:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:41:6:2:4:9:66.67%:23:4.5249E-3:36:3:2:1:9 0/1:37:6:4:2:9:66.67%:24:3.4965E-3:34:2:1:1:9 0/1:41:6:0:6:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:2:5:9:77.78%:29:1.1312E-3:46:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:43:7:3:4:8:87.5%:31:6.993E-4:60:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:41:7:4:3:8:87.5%:31:6.993E-4:33:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:4:5:10:90%:42:5.9538E-5:34:1:1:0:10 0/1:40:7:3:4:10:70%:28:1.548E-3:35:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:2:4:7:85.71%:26:2.331E-3:34:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:3:4:13:53.85%:25:2.6087E-3:37:6:5:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:43:10:4:6:13:76.92%:42:5.3843E-5:43:3:3:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:6:1:5:7:85.71%:26:2.331E-3:34:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:42:7:3:4:9:77.78%:29:1.1312E-3:35:2:1:1:9 0/1:39:14:8:6:16:87.5%:65:2.5454E-7:35:2:1:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:11:4:7:13:84.62%:49:1.0096E-5:38:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:49:7:5:2:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:37:6:1:5:7:85.71%:26:2.331E-3:32:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:4:3:8:87.5%:31:6.993E-4:38:1:0:1:8 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:40:9:1:8:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:42:5:2:3:11:45.45%:3:1.7544E-2:36:6:5:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:9:5:4:10:90%:42:5.9538E-5:38:1:1:0:10 0/1:39:10:5:5:15:66.67%:40:9.995E-5:37:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:41:10:6:4:12:83.33%:44:3.3652E-5:34:2:2:0:12 0/1:37:6:2:4:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:9:4:5:13:69.23%:36:2.2883E-4:36:4:4:0:13 0/1:40:7:3:4:9:77.78%:29:1.1312E-3:36:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:3:6:10:90%:42:5.9538E-5:30:1:1:0:10 0/1:40:6:2:4:9:66.67%:23:4.5249E-3:36:3:3:0:9 0/1:38:8:1:7:14:57.14%:30:9.6618E-4:38:6:5:1:14 0/1:36:6:2:4:7:85.71%:26:2.331E-3:38:1:1:0:8 0/1:37:11:4:7:13:84.62%:49:1.0096E-5:37:2:2:0:13 0/1:40:6:2:4:10:60%:22:5.418E-3:35:4:3:1:11 0/1:45:6:4:2:7:85.71%:26:2.331E-3:34:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:45:6:3:3:7:85.71%:26:2.331E-3:36:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:10:4:6:12:83.33%:44:3.3652E-5:36:2:2:0:12 0/1:38:11:4:7:18:61.11%:42:5.2969E-5:36:7:5:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3846857 . G A . PASS AC=70;AF=0.625;AN=112;ANN=A|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846857G>A||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:7:3:4:8:87.5%:31:6.993E-4:39:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:11:5:6:14:78.57%:47:1.6951E-5:38:3:1:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:4:4:10:80%:34:3.5723E-4:35:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:37:9:5:4:10:90%:42:5.9538E-5:37:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:43:7:2:5:8:87.5%:31:6.993E-4:39:1:1:0:8 0/1:40:8:4:4:10:80%:34:3.5723E-4:36:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:42:9:5:4:12:75%:37:1.6826E-4:38:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:7:3:4:8:87.5%:31:6.993E-4:33:1:1:0:8 0/1:40:14:4:10:18:77.78%:60:8.0605E-7:42:4:2:2:18 0/1:37:8:5:3:10:80%:34:3.5723E-4:38:2:1:1:10 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:40:6:2:4:9:66.67%:23:4.5249E-3:38:3:2:1:9 0/1:35:7:5:2:9:77.78%:29:1.1312E-3:37:2:1:1:9 0/1:36:6:0:6:7:85.71%:26:2.331E-3:39:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:2:5:8:87.5%:31:6.993E-4:60:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:43:7:3:4:8:87.5%:31:6.993E-4:60:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:40:7:4:3:9:77.78%:31:6.993E-4:38:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:4:5:10:90%:42:5.9538E-5:37:1:1:0:10 0/1:38:7:3:4:10:70%:28:1.548E-3:36:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:45:6:2:4:7:85.71%:26:2.331E-3:33:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:2:4:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:3:4:13:53.85%:25:2.6087E-3:38:6:5:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:44:10:4:6:13:76.92%:42:5.3843E-5:44:3:3:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:43:7:3:4:9:77.78%:29:1.1312E-3:38:2:1:1:9 0/1:36:14:8:6:16:87.5%:65:2.5454E-7:35:2:1:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:4:2:7:85.71%:26:2.331E-3:39:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:11:4:7:13:84.62%:49:1.0096E-5:38:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:47:7:5:2:8:87.5%:31:6.993E-4:39:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:4:3:8:87.5%:31:6.993E-4:39:1:0:1:8 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:9:1:8:10:90%:42:5.9538E-5:39:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:43:5:2:3:11:45.45%:3:1.7544E-2:36:6:5:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:40:6:3:3:7:85.71%:26:2.331E-3:38:1:1:0:7 0/1:38:9:5:4:11:81.82%:39:1.1057E-4:33:2:2:0:11 0/1:39:10:5:5:15:66.67%:40:9.995E-5:37:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:10:6:4:11:90.91%:47:1.7011E-5:39:1:1:0:12 0/1:33:6:2:4:7:85.71%:26:2.331E-3:39:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:9:4:5:13:69.23%:36:2.2883E-4:37:4:4:0:14 0/1:40:7:3:4:9:77.78%:29:1.1312E-3:35:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 0/1:36:6:2:4:9:66.67%:23:4.5249E-3:36:3:3:0:9 0/1:37:8:1:7:16:50%:29:1.2236E-3:37:8:7:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:11:4:7:13:84.62%:49:1.0096E-5:38:2:2:0:13 0/1:37:7:3:4:10:70%:28:1.548E-3:38:3:2:1:11 0/1:43:6:4:2:7:85.71%:26:2.331E-3:37:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:45:6:3:3:7:85.71%:26:2.331E-3:39:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:4:6:11:90.91%:47:1.7011E-5:39:1:1:0:12 0/1:36:11:4:7:18:61.11%:42:5.2969E-5:38:7:5:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3846860 . T G . PASS AC=70;AF=0.614;AN=114;ANN=G|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846860T>G||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:39:7:3:4:8:87.5%:31:6.993E-4:39:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:39:11:5:6:15:73.33%:46:2.4988E-5:37:4:1:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:4:4:10:80%:34:3.5723E-4:38:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:37:9:5:4:10:90%:42:5.9538E-5:37:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:43:7:2:5:8:87.5%:31:6.993E-4:39:1:1:0:8 0/1:38:8:4:4:10:80%:34:3.5723E-4:38:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:40:9:5:4:12:75%:37:1.6826E-4:38:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:7:3:4:8:87.5%:31:6.993E-4:33:1:1:0:8 0/1:40:14:4:10:18:77.78%:60:8.0605E-7:42:4:2:2:18 0/1:37:8:5:3:11:72.73%:32:5.16E-4:36:3:2:1:11 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:43:12:6:6:13:92.31%:58:1.3461E-6:37:1:1:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:39:6:2:4:9:66.67%:23:4.5249E-3:38:3:2:1:9 0/1:37:7:5:2:9:77.78%:29:1.1312E-3:37:2:1:1:9 0/1:37:6:0:6:8:75%:24:3.4965E-3:37:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:2:5:8:87.5%:31:6.993E-4:37:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:7:3:4:8:87.5%:31:6.993E-4:60:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:40:7:4:3:9:77.78%:29:1.1312E-3:37:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:4:5:10:90%:42:5.9538E-5:37:1:1:0:10 0/1:37:7:3:4:10:70%:28:1.548E-3:38:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:6:2:4:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:2:4:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:3:4:14:50%:25:2.8986E-3:37:7:6:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:10:4:6:13:76.92%:42:5.3843E-5:45:3:3:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:43:7:3:4:9:77.78%:29:1.1312E-3:38:2:1:1:9 0/1:37:14:8:6:16:87.5%:65:2.5454E-7:36:2:1:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:4:2:7:85.71%:26:2.331E-3:39:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:10:4:6:12:83.33%:44:3.3652E-5:38:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:44:7:5:2:8:87.5%:31:6.993E-4:39:1:1:0:8 0/1:37:6:1:5:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:4:3:8:87.5%:31:6.993E-4:37:1:0:1:8 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:37:9:1:8:10:90%:42:5.9538E-5:39:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:3:3:7:85.71%:26:2.331E-3:38:1:1:0:7 0/1:39:9:5:4:11:81.82%:39:1.1057E-4:38:2:2:0:11 0/1:39:10:5:5:15:66.67%:40:9.995E-5:38:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:10:6:4:12:83.33%:44:3.3652E-5:39:2:2:0:12 0/1:34:6:2:4:7:85.71%:26:2.331E-3:39:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:9:4:5:13:69.23%:36:2.2883E-4:37:4:4:0:14 0/1:37:7:3:4:9:77.78%:29:1.1312E-3:39:2:2:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:3:6:10:90%:42:5.9538E-5:33:1:1:0:10 0/1:37:6:2:4:9:66.67%:23:4.5249E-3:38:3:3:0:9 0/1:37:8:1:7:18:44.44%:28:1.4461E-3:36:10:9:1:18 0/1:36:7:3:4:8:87.5%:31:6.993E-4:34:1:1:0:8 0/1:37:11:4:7:13:84.62%:49:1.0096E-5:39:2:2:0:13 0/1:37:7:3:4:11:63.64%:27:1.935E-3:38:4:3:1:11 0/1:42:6:4:2:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:45:6:3:3:7:85.71%:26:2.331E-3:39:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:10:4:6:12:83.33%:44:3.3652E-5:38:2:2:0:12 0/1:37:11:4:7:19:57.89%:42:6.2811E-5:37:8:6:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3846866 . C A . PASS AC=66;AF=0.569;AN=116;ANN=A|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846866C>A||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:40:11:5:6:16:68.75%:44:3.3854E-5:34:5:1:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:4:4:10:80%:34:3.5723E-4:37:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:36:9:5:4:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:41:7:2:5:8:87.5%:31:6.993E-4:32:1:1:0:8 0/1:40:8:4:4:10:80%:34:3.5723E-4:38:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:7:2:5:8:87.5%:31:6.993E-4:30:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:39:9:5:4:12:75%:37:1.6826E-4:38:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:7:3:4:8:87.5%:31:6.993E-4:33:1:1:0:8 0/1:39:14:4:10:18:77.78%:60:8.0605E-7:42:4:2:2:18 0/1:37:8:5:3:12:66.67%:31:6.7304E-4:35:4:3:1:12 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:38:6:2:4:9:66.67%:23:4.5249E-3:38:3:2:1:9 0/1:38:7:5:2:9:77.78%:29:1.1312E-3:38:2:1:1:9 0/1:38:6:0:6:8:75%:24:3.4965E-3:36:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:7:2:5:8:87.5%:31:6.993E-4:38:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:38:7:3:4:8:87.5%:31:6.993E-4:60:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:41:7:4:3:9:77.78%:29:1.1312E-3:38:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:8:3:5:9:88.89%:36:2.0568E-4:38:1:1:0:10 0/1:37:7:3:4:10:70%:28:1.548E-3:36:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:42:6:2:4:8:75%:24:3.4965E-3:32:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:2:4:8:75%:24:3.4965E-3:35:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:7:3:4:14:50%:25:2.8986E-3:37:7:6:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:38:4:0:4:10:40%:3:4.3344E-2:36:6:3:3:10 0/1:39:10:4:6:13:76.92%:42:5.3843E-5:45:3:3:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:2:5:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:44:7:3:4:9:77.78%:29:1.1312E-3:38:2:1:1:9 0/1:37:14:8:6:16:87.5%:65:2.5454E-7:37:2:1:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:4:2:7:85.71%:26:2.331E-3:38:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:11:4:7:13:84.62%:49:1.0096E-5:38:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:7:5:2:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:34:6:1:5:7:85.71%:26:2.331E-3:37:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:4:3:8:87.5%:31:6.993E-4:38:1:0:1:8 1/1:37:12:4:8:13:92.31%:58:1.3461E-6:32:1:1:0:13 0/1:36:7:2:5:8:87.5%:31:6.993E-4:33:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:38:9:1:8:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:42:5:2:3:11:45.45%:3:1.7544E-2:36:6:5:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:6:3:3:7:85.71%:26:2.331E-3:38:1:1:0:7 0/1:38:9:5:4:12:75%:37:1.6826E-4:37:3:3:0:12 0/1:40:10:5:5:15:66.67%:40:9.995E-5:37:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:10:6:4:12:83.33%:44:3.3652E-5:36:2:2:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:9:4:5:12:75%:37:1.6826E-4:37:3:3:0:14 0/1:36:7:3:4:10:70%:28:1.548E-3:36:3:3:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:2:6:10:80%:34:3.5723E-4:33:2:2:0:11 0/1:36:6:2:4:9:66.67%:23:4.5249E-3:38:3:3:0:9 0/1:38:8:1:7:18:44.44%:28:1.4461E-3:35:10:9:1:18 0/1:36:7:3:4:8:87.5%:31:6.993E-4:30:1:1:0:8 1/1:36:11:4:7:12:91.67%:53:4.8074E-6:38:1:1:0:13 0/1:35:7:3:4:11:63.64%:27:1.935E-3:36:4:3:1:11 0/1:42:6:4:2:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:44:6:3:3:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:10:4:6:13:76.92%:42:5.3843E-5:36:3:2:1:13 0/1:37:11:4:7:19:57.89%:42:6.2811E-5:37:8:6:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3846881 . AT A . PASS AC=60;AF=0.508;AN=118;ANN=A|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846882delT||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:11:5:6:16:68.75%:44:3.3854E-5:37:5:1:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:1:8:10:90%:42:5.9538E-5:29:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:8:4:4:10:80%:34:3.5723E-4:35:2:2:0:10 0/0:38:3:2:1:10:30%:4:1.0526E-1:36:7:5:2:10 0/1:38:8:5:3:10:80%:34:3.5723E-4:36:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:9:5:4:10:90%:42:5.9538E-5:32:1:1:0:10 0/1:38:6:1:5:8:75%:24:3.4965E-3:44:2:2:0:8 0/1:38:8:4:4:10:80%:34:3.5723E-4:38:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:7:2:5:8:87.5%:31:6.993E-4:38:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:38:7:3:4:9:77.78%:29:1.1312E-3:33:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:9:5:4:13:69.23%:36:2.2883E-4:36:4:1:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:39:14:4:10:18:77.78%:60:8.0605E-7:37:4:3:1:18 0/1:38:8:5:3:14:57.14%:30:9.6618E-4:36:6:4:2:14 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:3:1:10:40%:3:4.3344E-2:36:6:5:1:10 0/1:42:12:6:6:16:75%:50:8.0605E-6:33:4:3:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:38:7:5:2:10:70%:28:1.548E-3:37:3:2:1:10 0/1:38:6:0:6:8:75%:24:3.4965E-3:38:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:7:2:5:8:87.5%:31:6.993E-4:35:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:38:7:3:4:9:77.78%:29:1.1312E-3:48:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:40:7:4:3:10:70%:28:1.548E-3:36:3:0:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:9:4:5:12:75%:37:1.6826E-4:35:3:2:1:12 0/1:38:7:3:4:10:70%:28:1.548E-3:38:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:2:4:9:66.67%:23:4.5249E-3:36:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:2:4:9:66.67%:23:4.5249E-3:36:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:38:6:1:5:7:85.71%:26:2.331E-3:34:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:7:3:4:14:50%:25:2.8986E-3:37:7:6:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:38:4:0:4:10:40%:3:4.3344E-2:37:6:3:3:10 0/1:39:10:4:6:12:83.33%:44:3.3652E-5:38:2:2:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:7:2:5:10:70%:28:1.548E-3:34:3:3:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:41:7:3:4:12:58.33%:26:2.2883E-3:36:5:3:2:12 0/1:38:14:8:6:16:87.5%:65:2.5454E-7:36:2:1:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:4:2:8:75%:24:3.4965E-3:35:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:11:4:7:12:84.62%:49:1.0096E-5:38:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:7:5:2:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:4:3:10:70%:28:1.548E-3:37:3:2:1:10 0/1:38:12:4:8:14:85.71%:55:2.9913E-6:35:2:1:1:14 0/1:38:7:3:4:10:70%:28:1.548E-3:36:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:38:9:1:8:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:43:5:2:3:12:41.67%:3:1.8634E-2:35:7:6:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:3:3:8:75%:24:3.4965E-3:38:2:1:1:8 0/1:39:9:5:4:14:64.29%:35:2.8986E-4:36:5:5:0:14 0/1:39:10:5:5:15:66.67%:40:9.995E-5:38:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:10:6:4:13:76.92%:42:5.3843E-5:35:3:2:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:9:4:5:13:69.23%:36:2.2883E-4:36:4:4:0:13 0/1:38:7:3:4:12:58.33%:26:2.2883E-3:35:5:4:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:9:3:6:13:69.23%:36:2.2883E-4:33:4:4:0:13 0/1:38:6:2:4:9:66.67%:23:4.5249E-3:37:3:3:0:9 0/1:38:8:1:7:24:33.33%:27:1.949E-3:35:16:13:3:24 0/1:37:7:3:4:8:87.5%:31:6.993E-4:27:1:1:0:8 0/1:38:11:4:7:13:84.62%:49:1.0096E-5:38:2:2:0:14 0/1:38:7:3:4:11:63.64%:27:1.935E-3:37:4:3:1:11 0/1:40:6:4:2:9:66.67%:23:4.5249E-3:33:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:6:3:3:8:75%:24:3.4965E-3:35:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:10:4:6:16:62.5%:39:1.2413E-4:35:6:4:2:16 0/1:38:11:4:7:19:57.89%:42:6.2811E-5:37:8:6:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 MTB_anc 3846886 . A T . PASS AC=60;AF=0.492;AN=122;ANN=T|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846886A>T||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:7:3:4:8:87.5%:31:6.993E-4:39:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:11:5:6:16:68.75%:44:3.3854E-5:39:5:1:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:1:8:10:90%:42:5.9538E-5:33:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:8:4:4:10:80%:34:3.5723E-4:37:2:2:0:10 0/0:38:3:2:1:10:30%:4:1.0526E-1:38:7:5:2:10 0/1:38:8:5:3:9:88.89%:36:2.0568E-4:39:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:42:9:5:4:10:90%:42:5.9538E-5:38:1:1:0:10 0/1:37:6:1:5:8:75%:24:3.4965E-3:43:2:2:0:8 0/1:37:8:4:4:10:80%:34:3.5723E-4:39:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:2:5:8:87.5%:31:6.993E-4:34:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:38:7:3:4:9:77.78%:29:1.1312E-3:37:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:9:5:4:13:69.23%:36:2.2883E-4:38:4:1:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:38:7:3:4:8:87.5%:31:6.993E-4:39:1:1:0:8 0/1:39:14:4:10:18:77.78%:60:8.0605E-7:38:4:3:1:18 0/1:38:8:5:3:15:53.33%:29:1.0995E-3:37:7:5:2:15 0/1:38:8:4:4:9:88.89%:36:2.0568E-4:31:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:4:3:1:10:40%:3:4.3344E-2:37:6:5:1:10 0/1:41:12:6:6:16:75%:50:8.0605E-6:36:4:2:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:5:1:4:11:45.45%:3:1.7544E-2:37:6:3:3:11 0/1:37:7:5:2:10:70%:28:1.548E-3:38:3:2:1:10 0/1:37:6:0:6:8:75%:24:3.4965E-3:39:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:7:2:5:8:87.5%:31:6.993E-4:39:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:3:4:9:77.78%:29:1.1312E-3:47:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:40:7:4:3:10:70%:28:1.548E-3:38:3:0:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:9:4:5:12:75%:37:1.6826E-4:38:3:2:1:12 0/1:35:7:3:4:10:70%:28:1.548E-3:37:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:2:4:9:66.67%:23:4.5249E-3:37:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:2:4:9:66.67%:23:4.5249E-3:36:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:7:3:4:15:46.67%:25:3.1609E-3:36:8:6:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:4:0:4:10:40%:3:4.3344E-2:37:6:3:3:10 0/1:39:10:4:6:12:83.33%:44:3.3652E-5:38:2:2:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:7:2:5:10:70%:28:1.548E-3:38:3:3:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:41:7:3:4:12:58.33%:26:2.2883E-3:37:5:3:2:13 0/1:37:14:8:6:17:82.35%:63:4.8851E-7:37:3:1:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:6:4:2:9:66.67%:23:4.5249E-3:36:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:11:4:7:13:84.62%:49:1.0096E-5:39:2:1:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:41:7:5:2:8:87.5%:31:6.993E-4:39:1:1:0:8 0/1:37:6:1:5:8:75%:24:3.4965E-3:35:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:7:4:3:10:70%:28:1.548E-3:38:3:2:1:10 0/1:37:12:4:8:14:85.71%:55:2.9913E-6:38:2:1:1:14 0/1:36:7:3:4:9:77.78%:29:1.1312E-3:38:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:37:9:1:8:10:90%:42:5.9538E-5:39:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:41:5:2:3:12:41.67%:3:1.8634E-2:37:7:6:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:3:3:8:75%:24:3.4965E-3:38:2:1:1:8 0/1:39:9:5:4:14:64.29%:35:2.8986E-4:37:5:5:0:14 0/1:37:10:5:5:15:66.67%:40:9.995E-5:38:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:10:6:4:14:71.43%:41:7.6278E-5:36:4:3:1:14 0/1:35:6:2:4:9:66.67%:23:4.5249E-3:37:3:3:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:9:4:5:13:69.23%:36:2.2883E-4:37:4:4:0:13 0/1:38:7:3:4:12:58.33%:26:2.2883E-3:38:5:4:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:9:3:6:13:69.23%:36:2.2883E-4:36:4:4:0:13 0/1:37:6:2:4:10:60%:22:5.418E-3:37:4:4:0:10 0/1:38:8:1:7:24:33.33%:27:1.949E-3:37:16:13:3:24 0/1:37:7:3:4:8:87.5%:31:6.993E-4:35:1:1:0:8 0/1:38:11:4:7:16:68.75%:44:3.3854E-5:35:5:3:2:16 0/1:37:7:3:4:11:63.64%:27:1.935E-3:37:4:3:1:11 0/1:40:6:4:2:9:66.67%:23:4.5249E-3:37:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:6:3:3:8:75%:24:3.4965E-3:38:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:10:4:6:17:58.82%:38:1.4831E-4:35:7:5:2:17 0/1:37:11:4:7:19:57.89%:42:6.2811E-5:37:8:6:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 MTB_anc 3846897 . T G . PASS AC=60;AF=0.476;AN=126;ANN=G|intergenic_region|MODIFIER|Rv3428c_Rv3428c-PPE59_Rv3429|gene3504-gene3505|intergenic_region|gene3504-gene3505|||n.3846897T>G||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:7:3:4:8:87.5%:31:6.993E-4:30:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:11:5:6:16:68.75%:44:3.3854E-5:36:5:1:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:1:8:10:90%:42:5.9538E-5:30:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:7:4:3:9:77.78%:29:1.1312E-3:38:2:2:0:10 0/0:38:3:2:1:10:30%:4:1.0526E-1:37:7:5:2:10 0/1:37:8:5:3:9:88.89%:36:2.0568E-4:38:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:9:5:4:10:90%:42:5.9538E-5:38:1:1:0:10 0/1:38:6:1:5:7:85.71%:26:2.331E-3:38:1:1:0:7 0/1:37:8:4:4:10:80%:34:3.5723E-4:38:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:7:2:5:9:77.78%:29:1.1312E-3:34:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:7:3:4:10:70%:28:1.548E-3:36:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:9:5:4:13:69.23%:36:2.2883E-4:37:4:1:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:7:3:4:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:37:14:4:10:21:66.67%:56:2.1998E-6:35:7:4:3:21 0/1:38:8:5:3:15:53.33%:29:1.0995E-3:35:7:5:2:16 0/1:37:8:4:4:9:88.89%:36:2.0568E-4:34:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:4:3:1:11:36.36%:4:4.5113E-2:37:7:5:2:11 0/1:39:12:6:6:16:75%:50:8.0605E-6:36:4:2:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:5:1:4:12:41.67%:3:1.8634E-2:36:7:4:3:12 0/1:38:7:5:2:12:58.33%:26:2.2883E-3:36:5:2:3:12 0/1:36:6:0:6:8:75%:24:3.4965E-3:38:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:7:2:5:9:77.78%:29:1.1312E-3:34:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:7:3:4:9:77.78%:29:1.1312E-3:49:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:6:3:3:9:66.67%:23:4.5249E-3:38:3:0:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:9:4:5:12:75%:37:1.6826E-4:38:3:2:1:12 0/1:37:7:3:4:11:63.64%:27:1.935E-3:37:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:2:4:10:60%:22:5.418E-3:36:4:4:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:6:2:4:9:66.67%:23:4.5249E-3:36:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:1:5:8:75%:24:3.4965E-3:38:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:7:3:4:15:46.67%:25:3.1609E-3:37:8:6:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:0:4:10:40%:3:4.3344E-2:36:6:3:3:10 0/1:39:10:4:6:12:83.33%:44:3.3652E-5:38:2:2:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:7:2:5:10:70%:28:1.548E-3:37:3:3:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:41:7:3:4:13:53.85%:25:2.6087E-3:36:6:3:3:13 0/1:36:14:8:6:18:77.78%:60:8.0605E-7:37:4:2:2:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:6:4:2:10:60%:22:5.418E-3:35:4:2:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:10:4:6:13:76.92%:42:5.3843E-5:36:3:2:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:7:5:2:8:87.5%:31:6.993E-4:34:1:1:0:8 0/1:36:6:1:5:8:75%:24:3.4965E-3:37:2:2:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:7:4:3:10:70%:28:1.548E-3:38:3:2:1:10 0/1:38:12:4:8:15:80%:52:5.2605E-6:36:3:1:2:15 0/1:37:7:3:4:9:77.78%:29:1.1312E-3:38:2:2:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:37:9:1:8:10:90%:42:5.9538E-5:38:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:6:3:3:8:75%:24:3.4965E-3:38:2:1:1:8 0/1:37:9:5:4:15:60%:34:3.4983E-4:36:6:6:0:15 0/1:40:10:5:5:16:62.5%:39:1.2413E-4:37:6:5:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:10:6:4:16:62.5%:39:1.2413E-4:35:6:4:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:9:4:5:13:69.23%:36:2.2883E-4:37:4:4:0:13 0/1:38:7:3:4:13:53.85%:25:2.6087E-3:36:6:4:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:35:9:3:6:14:64.29%:35:2.8986E-4:34:5:5:0:15 0/1:37:6:2:4:10:60%:22:5.418E-3:38:4:4:0:10 0/1:37:8:1:7:25:32%:26:2.0146E-3:37:17:14:3:25 0/1:37:6:2:4:7:85.71%:26:2.331E-3:34:1:1:0:8 0/1:37:11:4:7:15:73.33%:46:2.4988E-5:36:4:2:2:15 0/1:38:7:3:4:11:63.64%:27:1.935E-3:37:4:3:1:11 0/1:36:6:4:2:9:66.67%:23:4.5249E-3:38:3:2:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:38:3:2:1:9:33.33%:4:1.0294E-1:37:6:5:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:38:3:2:1:9:33.33%:4:1.0294E-1:37:6:5:1:9 0/1:38:6:3:3:8:75%:24:3.4965E-3:38:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:10:4:6:17:58.82%:38:1.4831E-4:35:7:5:2:18 0/1:37:11:4:7:18:61.11%:42:5.2969E-5:37:7:6:1:19 0/0:38:3:1:2:9:33.33%:4:1.0294E-1:37:6:3:3:9 MTB_anc 3851888 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv3433c_Rv3433c|gene3509|transcript|Transcript_gene3509|Coding|1/1|c.1326G>A|p.Ala442Ala|1326/1422|1326/1422|442/473||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3851888C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3851888C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:40:10:30:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:34:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:35:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:35:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:34:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:34:7:27:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:38:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:35:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:29:8:21:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:23:2:21:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:36:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:38:10:28:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:34:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:35:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:24:5:19:25:100%:99:3.101E-14:0:0:0:0:28 1/1:36:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:37:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:34:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:33:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:34:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:35:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:34:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:35:33:7:26:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:37:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:34:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:34:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:39:10:29:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:33:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:32:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:35:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:34:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:35:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 MTB_anc 3854174 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3435c_Rv3435c|gene3511|transcript|Transcript_gene3511|Coding|1/1|c.620C>T|p.Ala207Val|620/855|620/855|207/284||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3854174G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3854174G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:49:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:42:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:42 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:38:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:21:11:10:22:95.45%:99:1.0931E-11:30:1:1:0:22 1/1:38:21:8:13:22:95.45%:99:1.8578E-12:0:0:0:0:23 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:37:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:38:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:21:18:40:97.5%:99:3.8137E-22:37:1:0:1:40 1/1:38:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 3858637 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv3439c_Rv3439c|gene3515|transcript|Transcript_gene3515|Coding|1/1|c.1026G>T|p.Pro342Pro|1026/1404|1026/1404|342/467||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.3858637C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3858637C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:39:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:43:51:36:15:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:24:18:6:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:45:26:19:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:35:24:17:7:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:36:20:16:37:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:40:52:36:16:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:43:34:9:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:41:33:8:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:38:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:37:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:36:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 3862472 . GA G . PASS AC=293;AF=0.983;AN=298;ANN=G|intergenic_region|MODIFIER|rplM_Rv3443c-esxT_Rv3444c|gene3519-gene3520|intergenic_region|gene3519-gene3520|||n.3862473delA||||||;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:33:26:12:14:24:96.3%:99:1.4382E-14:29:1:1:0:28 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:34:20:14:33:97.14%:99:3.2089E-19:27:1:1:0:35 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:37:16:9:7:18:88.89%:76:2.0936E-8:32:2:1:1:18 1/1:34:15:9:6:15:93.75%:75:2.8282E-8:36:1:0:1:16 1/1:35:14:8:6:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:14:7:7:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:29:16:13:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:28:12:16:26:96.55%:99:1.3074E-16:0:0:0:0:28 1/1:34:12:4:8:11:100%:64:3.698E-7:0:0:0:0:12 1/1:36:42:16:26:41:97.67%:99:6.6289E-24:27:1:1:0:43 1/1:36:15:7:8:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:19:9:10:18:100%:99:2.8292E-11:0:0:0:0:19 0/1:39:7:4:3:7:87.5%:31:6.993E-4:29:1:1:0:8 1/1:31:23:8:15:18:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:21:12:9:23:91.3%:99:3.6437E-11:25:2:2:0:23 1/1:34:27:11:16:27:96.43%:99:3.7915E-15:31:1:1:0:28 1/1:39:25:17:8:25:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:21:10:11:20:100%:99:1.8578E-12:0:0:0:0:21 0/1:35:15:7:8:17:88.24%:71:7.3277E-8:44:2:2:0:17 1/1:39:25:13:12:26:96.15%:99:5.4444E-14:24:1:1:0:26 1/1:38:25:13:12:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:21:11:10:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:23:8:15:24:95.83%:99:7.7525E-13:34:1:0:1:24 1/1:38:24:5:19:26:92.31%:99:7.6222E-13:32:2:2:0:26 1/1:37:26:11:15:25:96.3%:99:1.4382E-14:27:1:1:0:29 1/1:39:23:11:12:23:95.83%:99:7.7525E-13:60:1:0:1:24 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:26:18:8:27:92.86%:99:5.6872E-14:29:2:2:0:28 1/1:37:22:12:10:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:40:20:20:37:97.56%:99:9.8874E-23:32:1:1:0:41 1/1:40:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:33:13:20:33:97.06%:99:1.2301E-18:27:1:1:0:34 1/1:35:26:14:12:28:92.86%:99:5.6872E-14:25:2:2:0:28 1/1:36:42:22:20:41:95.45%:99:3.9431E-23:30:2:2:0:44 1/1:34:19:11:8:17:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:24:14:10:24:96%:99:2.0568E-13:59:1:1:0:25 1/1:35:24:11:13:22:100%:99:3.101E-14:0:0:0:0:24 1/1:39:30:15:15:29:96.77%:99:6.8754E-17:32:1:1:0:31 1/1:36:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:28:11:17:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:36:36:21:15:35:97.3%:99:2.1762E-20:33:1:1:0:38 1/1:39:27:14:13:25:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:42:21:21:38:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:21:7:14:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:25:12:13:24:96.15%:99:5.4444E-14:30:1:1:0:26 1/1:35:34:17:17:31:100%:99:3.5146E-20:0:0:0:0:34 1/1:34:36:17:19:32:97.3%:99:2.2598E-21:0:0:0:0:36 1/1:37:29:15:14:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:33:26:12:14:22:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:17:10:28:96.43%:99:3.7915E-15:27:1:1:0:28 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:32:31:14:17:27:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:35:16:19:35:97.22%:99:8.3613E-20:32:1:1:0:37 1/1:34:22:8:14:20:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:24:12:12:23:100%:99:3.101E-14:0:0:0:0:24 1/1:38:34:22:12:33:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:32:24:9:15:20:100%:99:3.101E-14:0:0:0:0:24 1/1:33:13:8:5:12:100%:70:9.6148E-8:0:0:0:0:13 0/1:41:17:9:8:19:89.47%:82:5.9414E-9:36:2:1:1:19 1/1:37:24:12:12:26:92.31%:99:7.6222E-13:33:2:1:1:26 1/1:36:25:11:14:27:92.59%:99:2.0853E-13:27:2:2:0:27 1/1:34:14:7:7:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:18:17:1:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:28:17:11:28:96.55%:99:9.9776E-16:25:1:1:0:29 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:31:20:11:9:18:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:24:18:6:23:100%:99:3.101E-14:0:0:0:0:24 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:25:18:7:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:23:5:18:24:95.83%:99:7.7525E-13:27:1:1:0:24 1/1:33:46:29:17:41:97.87%:99:2.9526E-26:33:1:1:0:47 1/1:33:22:12:10:20:95.65%:99:2.9149E-12:31:1:1:0:23 1/1:37:17:9:8:18:94.44%:86:2.0936E-9:35:1:1:0:18 1/1:36:21:6:15:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:21:12:9:19:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:20:15:5:18:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:15:6:9:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:37:18:19:37:97.37%:99:5.6582E-21:24:1:1:0:38 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:34:15:19:31:97.14%:99:3.2089E-19:35:1:0:1:35 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:16:7:9:17:94.12%:81:7.7134E-9:27:1:1:0:17 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:34:18:10:8:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:24:13:11:22:100%:99:3.101E-14:0:0:0:0:24 1/1:38:13:6:7:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:32:32:12:20:29:96.97%:99:4.7095E-18:65:1:1:0:33 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:21:10:11:21:95.45%:99:1.0931E-11:30:1:1:0:22 1/1:35:20:9:11:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:19:11:8:18:95%:98:1.5234E-10:29:1:1:0:20 1/1:35:18:9:9:20:90%:87:1.6758E-9:27:2:2:0:20 1/1:36:29:10:19:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:20:7:13:19:100%:99:7.2544E-12:0:0:0:0:21 1/1:32:17:5:12:15:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:18:6:12:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:30:13:17:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:32:11:21:33:91.43%:99:7.5196E-17:32:3:3:0:35 1/1:34:20:7:13:20:90.91%:98:1.3117E-10:26:2:2:0:23 1/1:34:16:2:14:16:94.12%:81:7.7134E-9:27:1:1:0:17 1/1:35:11:5:6:11:91.67%:53:4.8074E-6:27:1:1:0:12 1/1:36:35:14:21:35:97.22%:99:8.3613E-20:27:1:1:0:36 1/1:33:46:25:21:45:95.83%:99:1.9036E-25:33:2:1:1:48 1/1:32:18:10:8:15:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:16:3:13:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:18:7:11:19:90%:87:1.6758E-9:34:2:1:1:20 1/1:33:35:15:20:33:94.59%:99:4.2437E-19:28:2:2:0:37 1/1:34:33:13:20:32:94.29%:99:5.9366E-18:28:2:1:1:35 1/1:35:19:7:12:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:26:10:16:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:31:13:18:29:96.88%:99:1.8007E-17:29:1:1:0:32 1/1:33:27:8:19:26:93.1%:99:1.5465E-14:32:2:0:2:29 1/1:37:19:5:14:19:95%:98:1.5234E-10:24:1:1:0:20 1/1:36:28:12:16:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:31:6:25:30:96.88%:99:1.8007E-17:31:1:1:0:32 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:17:4:13:18:94.44%:86:2.0936E-9:35:1:0:1:18 1/1:34:32:12:20:30:96.97%:99:4.7095E-18:31:1:1:0:33 1/1:36:33:8:25:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:22:6:16:24:91.67%:99:1.0078E-11:29:2:1:1:24 1/1:37:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:27:12:15:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:21:10:11:23:91.3%:99:3.6437E-11:26:2:2:0:23 1/1:33:24:11:13:22:100%:99:3.101E-14:0:0:0:0:24 1/1:38:13:6:7:14:92.86%:64:3.7391E-7:27:1:1:0:15 1/1:37:30:16:14:31:93.75%:99:3.0612E-16:27:2:2:0:32 1/1:37:35:18:17:36:94.59%:99:4.2437E-19:31:2:1:1:37 1/1:36:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 0/1:36:6:2:4:7:85.71%:26:2.331E-3:37:1:0:1:7 MTB_anc 3863080 . C G . PASS AC=68;AF=0.227;AN=300;ANN=G|missense_variant|MODERATE|esxU_Rv3445c|gene3521|transcript|Transcript_gene3521|Coding|1/1|c.185G>C|p.Trp62Ser|185/318|185/318|62/105||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3863080C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3863080C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:31:0%:59:1E0:38:31:9:22:31 0/0:39:1:0:1:23:4.35%:34:5E-1:41:22:6:16:23 1/1:40:55:15:40:55:100%:99:1.0149E-32:0:0:0:0:55 0/0:0:0:0:0:31:0%:59:1E0:40:31:11:20:32 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:11:24:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:9:27:36 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:34 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:15 0/0:0:0:0:0:39:0%:74:1E0:38:39:15:24:40 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:21 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:25 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 1/1:39:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:30 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:32:0%:59:1E0:38:32:12:20:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:30 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:17 0/0:0:0:0:0:23:0%:44:1E0:39:23:9:14:23 0/0:0:0:0:0:18:0%:32:1E0:41:18:4:14:18 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 0/0:0:0:0:0:29:0%:55:1E0:39:29:8:21:29 0/0:33:1:1:0:34:2.94%:51:5E-1:38:33:11:22:35 1/1:38:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:34:0%:62:1E0:39:34:9:25:34 1/1:40:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:4:21:26 0/0:0:0:0:0:36:0%:66:1E0:39:36:10:26:36 0/0:0:0:0:0:49:0%:93:1E0:38:49:18:31:49 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:42:0%:77:1E0:39:42:13:29:43 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:7:24:32 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:20 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:28 0/0:0:0:0:0:37:0%:70:1E0:40:37:13:24:37 1/1:41:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:28 0/0:0:0:0:0:38:0%:70:1E0:37:38:12:26:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:8:21:29 0/0:60:1:1:0:22:4.55%:31:5E-1:44:21:7:14:22 0/0:0:0:0:0:37:0%:70:1E0:38:37:12:25:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:7:18:25 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:25 0/0:0:0:0:0:40:0%:74:1E0:38:40:14:26:41 0/0:0:0:0:0:41:0%:78:1E0:37:41:21:20:41 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:41:0%:78:1E0:39:41:14:27:43 0/0:0:0:0:0:27:0%:52:1E0:41:27:8:19:27 0/0:0:0:0:0:33:0%:63:1E0:38:33:11:22:33 0/0:0:0:0:0:30:0%:55:1E0:39:30:6:24:32 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:19 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:43 0/0:0:0:0:0:36:0%:66:1E0:38:36:14:22:36 0/0:0:0:0:0:24:0%:44:1E0:37:24:7:17:24 0/0:0:0:0:0:42:0%:77:1E0:39:42:12:30:42 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:12:0%:21:1E0:43:12:8:4:12 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:37:0%:70:1E0:38:37:11:26:39 0/0:0:0:0:0:16:0%:29:1E0:40:16:4:12:17 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:7:20:27 1/1:38:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:19:0%:37:1E0:39:19:7:12:19 0/0:0:0:0:0:44:0%:81:1E0:39:44:14:30:44 0/0:0:0:0:0:33:0%:63:1E0:38:33:9:24:34 1/1:38:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:24:0%:44:1E0:38:24:8:16:25 1/1:37:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:23 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:20:0%:36:1E0:39:20:6:14:20 0/0:0:0:0:0:25:0%:48:1E0:37:25:13:12:25 0/0:0:0:0:0:16:0%:29:1E0:46:16:9:7:16 0/0:0:0:0:0:44:0%:81:1E0:38:44:17:27:45 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:20 0/0:0:0:0:0:39:0%:74:1E0:38:39:12:27:40 0/0:0:0:0:0:34:0%:62:1E0:38:34:10:24:34 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 0/0:0:0:0:0:25:0%:48:1E0:37:25:12:13:25 0/0:0:0:0:0:35:0%:67:1E0:38:35:12:23:35 0/0:0:0:0:0:24:0%:44:1E0:39:24:6:18:24 0/0:0:0:0:0:21:0%:40:1E0:41:21:5:16:22 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:31 0/0:0:0:0:0:28:0%:51:1E0:37:28:11:17:30 0/0:0:0:0:0:23:0%:44:1E0:37:23:5:18:23 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:32:0%:59:1E0:38:32:7:25:32 0/0:0:0:0:0:23:0%:44:1E0:37:23:8:15:23 0/0:0:0:0:0:32:0%:59:1E0:38:32:7:25:33 0/0:0:0:0:0:31:0%:59:1E0:39:31:10:21:31 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:23 0/0:0:0:0:0:31:0%:59:1E0:39:31:8:23:31 0/0:0:0:0:0:28:0%:51:1E0:39:28:10:18:28 1/1:36:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:34 1/1:36:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:33:5:28:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:35:0%:67:1E0:38:35:10:25:35 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:18 0/0:0:0:0:0:43:0%:82:1E0:38:43:23:20:43 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:41 0/0:0:0:0:0:32:0%:59:1E0:37:32:10:22:33 0/0:0:0:0:0:28:0%:51:1E0:37:28:8:20:30 0/0:0:0:0:0:30:0%:55:1E0:36:30:8:22:30 1/1:36:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:29:4:25:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:32:5:27:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:28:0%:51:1E0:37:28:7:21:28 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:29:0%:55:1E0:36:29:5:24:29 0/0:0:0:0:0:39:0%:74:1E0:37:39:9:30:40 1/1:37:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:33:0%:63:1E0:37:33:9:24:34 0/0:0:0:0:0:26:0%:47:1E0:36:26:9:17:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:28 0/0:0:0:0:0:38:0%:70:1E0:38:38:14:24:38 0/0:0:0:0:0:38:0%:70:1E0:39:38:12:26:38 0/0:0:0:0:0:25:0%:48:1E0:39:25:7:18:25 0/0:0:0:0:0:42:0%:77:1E0:37:42:16:26:43 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:21 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:30:0%:55:1E0:36:30:6:24:30 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:34:0%:62:1E0:37:34:9:25:34 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:26 MTB_anc 3866350 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|eccC4_Rv3447c|gene3523|transcript|Transcript_gene3523|Coding|1/1|c.1889G>A|p.Gly630Glu|1889/3711|1889/3711|630/1236||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3866350C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3866350C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:53:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:51:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:53:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:49:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:29:4:25:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:61:30:31:61:100%:99:2.609E-36:0:0:0:0:61 1/1:40:63:28:35:63:100%:99:1.657E-37:0:0:0:0:63 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:37:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:48:24:24:49:97.96%:99:1.9625E-27:60:1:1:0:51 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 MTB_anc 3871246 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|eccB4_Rv3450c|gene3526|transcript|Transcript_gene3526|Coding|1/1|c.1251G>A|p.Gly417Gly|1251/1413|1251/1413|417/470||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3871246C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3871246C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:43:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:28:17:11:29:96.55%:99:9.9776E-16:60:1:0:1:30 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:17:7:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:34:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:35:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:35:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:35:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:36:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 3873242 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|cut3_Rv3451|gene3527|transcript|Transcript_gene3527|Coding|1/1|c.626G>A|p.Gly209Asp|626/789|626/789|209/262||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3873242G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3873242G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:49:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:52:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:51:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:56:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:68:34:34:68:100%:99:1.6809E-40:0:0:0:0:70 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:44:21:23:45:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:65:29:36:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:53:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:61:34:27:61:100%:99:2.609E-36:0:0:0:0:65 1/1:43:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:46:29:17:47:97.87%:99:2.9526E-26:37:1:1:0:47 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 3874508 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3874508G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3874508G>A||||||,A|intragenic_variant|MODIFIER|Rv3453_Rv3453|gene3529|gene_variant|gene3529|||n.3874508G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:45:46:26:20:46 0/0:0:0:0:0:20:0%:36:1E0:54:20:8:12:20 0/0:34:1:0:1:51:1.96%:84:5E-1:45:50:29:21:51 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:30:0%:55:1E0:47:30:18:12:31 0/0:60:1:1:0:25:4%:38:5E-1:50:24:11:13:26 0/0:38:1:0:1:33:3.03%:52:5E-1:51:32:14:18:33 0/0:0:0:0:0:48:0%:89:1E0:43:48:31:17:48 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:53:0%:99:1E0:45:53:25:28:53 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:21 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:22 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:44 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:41 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:27 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:19 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:44 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:40 0/0:0:0:0:0:55:0%:99:1E0:47:55:32:23:55 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:46:0%:85:1E0:46:46:21:25:46 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:42 0/0:60:1:1:0:17:5.88%:24:5E-1:45:16:10:6:17 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:17 0/0:0:0:0:0:46:0%:85:1E0:45:46:26:20:46 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:43 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:33 0/0:0:0:0:0:60:0%:99:1E0:41:60:31:29:61 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:49 0/0:0:0:0:0:31:0%:59:1E0:46:31:21:10:31 0/0:0:0:0:0:21:0%:40:1E0:51:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:45:33:13:20:33 0/0:0:0:0:0:16:0%:29:1E0:44:16:11:5:17 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 0/0:0:0:0:0:58:0%:99:1E0:44:58:29:29:60 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:31 0/0:0:0:0:0:49:0%:93:1E0:45:49:26:23:50 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:50:0%:92:1E0:44:50:25:25:50 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:47 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:50:0%:92:1E0:47:50:34:16:50 0/0:0:0:0:0:70:0%:99:1E0:45:70:36:34:70 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/1:50:18:12:6:29:62.07%:71:7.6888E-8:51:11:4:7:29 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:31 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:38:1:0:1:46:2.17%:73:5E-1:44:45:24:21:46 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:36 0/0:0:0:0:0:19:0%:37:1E0:51:19:13:6:19 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:24:0%:44:1E0:48:24:8:16:24 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:47:0%:89:1E0:43:47:28:19:48 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:56:0%:99:1E0:44:56:31:25:56 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:21 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:48 0/0:0:0:0:0:25:0%:48:1E0:46:25:15:10:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:27 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:25:9:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:38 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:50 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:30 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:28 0/0:0:0:0:0:50:0%:92:1E0:43:50:20:30:51 0/0:0:0:0:0:54:0%:99:1E0:42:54:31:23:54 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:32 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:27 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:57 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:55:0%:99:1E0:41:55:31:24:56 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:39 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:52 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:39 0/0:0:0:0:0:33:0%:63:1E0:38:33:15:18:33 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:45 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:37 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:34 0/0:35:1:0:1:65:1.54%:99:5E-1:38:64:30:34:65 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:44:0%:81:1E0:46:44:19:25:44 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:46 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:32 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:38 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:44 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:46 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:35 0/0:0:0:0:0:49:0%:93:1E0:41:49:19:30:50 0/0:0:0:0:0:29:0%:55:1E0:41:29:21:8:31 MTB_anc 3874722 . AT A . PASS AC=283;AF=0.943;AN=300;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3874723delT||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3874723delT||||||,A|intragenic_variant|MODIFIER|Rv3453_Rv3453|gene3529|gene_variant|gene3529|||n.3874723delT||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:46:25:21:46:97.87%:99:2.9526E-26:37:1:1:0:47 1/1:45:21:11:10:21:95.45%:99:1.0931E-11:37:1:0:1:22 1/1:41:42:17:25:43:95.45%:99:3.9431E-23:37:2:1:1:44 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:10:19:29:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:46:23:7:16:23:95.83%:99:7.7525E-13:33:1:1:0:24 1/1:47:30:15:15:31:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:41:24:8:16:26:92.31%:99:7.6222E-13:35:2:1:1:26 0/1:42:32:12:20:36:88.89%:99:2.0653E-16:41:4:3:1:36 1/1:44:20:8:12:21:95.24%:99:4.0873E-11:60:1:0:1:21 1/1:48:31:11:20:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:25:9:16:26:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:40:47:24:23:49:95.92%:99:5.0044E-26:60:2:2:0:49 1/1:41:21:9:12:22:95.45%:99:1.0931E-11:37:1:1:0:22 1/1:43:23:9:14:23:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:44:23:11:12:24:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:28:18:10:30:93.33%:99:4.194E-15:40:2:0:2:30 1/1:43:33:12:21:31:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:16:24:42:93.02%:99:2.287E-21:35:3:1:2:44 0/1:39:30:18:12:32:88.24%:99:2.5943E-15:35:4:2:2:34 0/0:0:0:0:0:30:0%:55:1E0:51:30:19:11:31 1/1:43:28:15:13:30:93.33%:99:4.194E-15:47:2:1:1:30 1/1:41:18:8:10:19:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:38:20:12:8:19:95.24%:99:4.0873E-11:37:1:1:0:21 1/1:46:21:12:9:22:91.3%:99:3.6437E-11:44:2:2:0:23 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:27:11:16:28:96.43%:99:3.7915E-15:32:1:1:0:29 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:20:17:38:97.37%:99:5.6582E-21:37:1:1:0:38 1/1:44:37:22:15:39:94.87%:99:3.0128E-20:48:2:1:1:39 1/1:41:40:18:22:41:97.56%:99:9.8874E-23:37:1:0:1:41 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 0/1:43:43:23:20:47:89.58%:99:4.4594E-22:40:5:3:2:48 1/1:47:42:17:25:43:97.67%:99:6.6289E-24:34:1:1:0:43 1/1:45:29:12:17:30:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:42:35:18:17:36:94.59%:99:4.2437E-19:35:2:1:1:37 1/1:45:21:13:8:23:91.3%:99:3.6437E-11:46:2:1:1:23 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 0/1:41:23:10:13:25:88.46%:99:7.3681E-12:43:3:2:1:26 1/1:44:33:19:14:35:94.29%:99:5.9366E-18:37:2:0:2:35 0/1:44:17:9:8:19:89.47%:82:5.9414E-9:34:2:0:2:19 1/1:39:32:7:25:32:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:44:38:16:22:41:92.68%:99:3.1178E-20:35:3:2:1:41 1/1:48:38:17:21:40:95%:99:8.0088E-21:33:2:2:0:40 1/1:46:17:6:11:18:94.44%:86:2.0936E-9:31:1:1:0:18 0/1:41:23:9:14:26:88.46%:99:7.3681E-12:42:3:2:1:26 1/1:45:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:11:17:29:93.33%:99:4.194E-15:47:2:1:1:30 1/1:39:25:17:8:26:92.59%:99:2.0853E-13:34:2:0:2:27 1/1:44:52:23:29:54:96.3%:99:6.1952E-29:47:2:1:1:54 1/1:42:28:13:15:30:93.33%:99:4.194E-15:48:2:0:2:30 1/1:46:20:8:12:22:90.91%:98:1.3117E-10:33:2:1:1:22 1/1:43:39:15:24:40:97.5%:99:3.8137E-22:37:1:0:1:40 1/1:47:30:15:15:31:96.77%:99:6.8754E-17:60:1:0:1:31 1/1:41:26:14:12:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:37:16:21:36:97.37%:99:5.6582E-21:37:1:0:1:38 1/1:43:39:20:19:40:97.5%:99:3.8137E-22:37:1:1:0:40 0/1:43:25:10:15:28:89.29%:99:5.8768E-13:34:3:0:3:28 1/1:44:42:23:19:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:62:27:35:65:95.38%:99:5.2716E-34:37:3:0:3:65 0/1:45:22:7:15:25:88%:99:2.5916E-11:43:3:1:2:25 1/1:44:29:14:15:30:96.67%:99:2.6212E-16:51:1:1:0:30 0/1:41:12:3:9:15:80%:52:5.2605E-6:36:3:1:2:15 1/1:46:19:8:11:19:95%:98:1.5234E-10:37:1:0:1:20 1/1:42:39:14:25:40:97.5%:99:3.8137E-22:37:1:0:1:40 1/1:46:34:11:23:34:97.14%:99:3.2089E-19:60:1:0:1:35 1/1:46:29:10:19:31:93.55%:99:1.1344E-15:47:2:1:1:31 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:12:17:31:90.62%:99:3.5714E-15:48:3:1:2:32 0/0:38:1:0:1:32:3.12%:48:5E-1:47:31:18:13:33 1/1:43:33:19:14:34:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:20:8:12:20:95.24%:99:4.0873E-11:37:1:0:1:21 1/1:41:46:28:18:44:97.87%:99:2.9526E-26:37:1:0:1:47 1/1:42:25:14:11:26:92.59%:99:2.0853E-13:35:2:1:1:28 1/1:48:31:17:14:34:91.18%:99:2.7308E-16:51:3:1:2:34 1/1:45:26:12:14:28:92.86%:99:5.6872E-14:48:2:2:0:28 1/1:40:25:7:18:26:92.59%:99:2.0853E-13:43:2:1:1:27 1/1:43:33:15:18:32:100%:99:1.3852E-19:0:0:0:0:33 0/1:45:17:6:11:21:80.95%:76:2.3502E-8:36:4:2:2:21 1/1:46:32:11:21:31:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:51:29:11:18:30:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:43:34:16:18:33:97.14%:99:3.2089E-19:34:1:0:1:35 1/1:47:24:8:16:25:96%:99:2.0568E-13:34:1:0:1:25 1/1:39:41:17:24:42:97.62%:99:2.5612E-23:33:1:1:0:42 1/1:39:22:11:11:23:95.65%:99:2.9149E-12:37:1:0:1:23 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:21:10:11:21:91.3%:99:3.6437E-11:33:2:1:1:24 1/1:41:36:15:21:35:97.3%:99:2.1762E-20:33:1:0:1:37 1/1:42:33:11:22:36:91.67%:99:2.0653E-17:34:3:2:1:36 1/1:43:24:12:12:24:96%:99:2.0568E-13:37:1:1:0:25 1/1:43:24:8:16:26:92.31%:99:7.6222E-13:35:2:0:2:26 1/1:43:24:12:12:23:100%:99:3.101E-14:0:0:0:0:24 1/1:41:34:21:13:36:94.44%:99:1.5887E-18:37:2:1:1:36 1/1:41:26:15:11:26:96.3%:99:1.4382E-14:37:1:0:1:27 1/1:41:18:8:10:18:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:23:12:11:21:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:19:12:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:45:31:14:17:31:96.88%:99:2.1486E-18:0:0:0:0:31 1/1:45:37:17:20:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:46:31:19:12:33:93.94%:99:8.2416E-17:37:2:0:2:33 1/1:42:27:9:18:29:90%:99:4.6134E-14:33:3:1:2:30 1/1:43:35:18:17:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:40:33:13:20:35:94.29%:99:5.9366E-18:34:2:1:1:35 1/1:39:37:10:27:33:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:30:12:18:31:96.77%:99:6.8754E-17:32:1:1:0:31 1/1:37:30:12:18:31:90.91%:99:9.89E-16:36:3:1:2:34 1/1:41:28:11:17:29:93.33%:99:4.194E-15:32:2:0:2:30 1/1:43:55:18:37:54:96.49%:99:1.1048E-30:35:2:1:1:57 1/1:42:59:31:28:58:100%:99:4.1056E-35:0:0:0:0:59 1/1:41:26:12:14:26:92.86%:99:5.6872E-14:35:2:1:1:28 1/1:43:33:11:22:35:94.29%:99:5.9366E-18:34:2:1:1:35 1/1:36:45:18:27:44:93.75%:99:3.2362E-24:34:3:1:2:48 1/1:40:32:17:15:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:47:20:27:48:97.92%:99:7.6145E-27:37:1:1:0:48 1/1:38:30:11:19:31:90.91%:99:9.89E-16:34:3:1:2:33 1/1:39:45:22:23:45:97.83%:99:1.1441E-25:33:1:1:0:47 1/1:41:32:11:21:32:96.97%:99:4.7095E-18:34:1:1:0:33 1/1:41:44:21:23:46:95.65%:99:2.7459E-24:37:2:2:0:46 1/1:36:33:14:19:32:94.29%:99:5.9366E-18:33:2:0:2:35 1/1:39:35:14:21:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:39:17:22:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:36:22:14:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:34:18:16:33:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:49:25:24:48:100%:99:3.925E-29:0:0:0:0:49 1/1:37:35:15:20:33:97.22%:99:8.3613E-20:32:1:0:1:36 0/1:45:32:19:13:37:86.49%:99:4.8717E-16:35:5:3:2:37 1/1:40:29:14:15:31:90.62%:99:3.5714E-15:34:3:2:1:32 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:35:17:18:35:97.22%:99:8.3613E-20:37:1:0:1:36 1/1:42:37:17:20:37:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:27:13:14:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:42:17:25:43:95.45%:99:3.9431E-23:35:2:1:1:44 1/1:45:42:24:18:43:95.45%:99:3.9431E-23:35:2:0:2:44 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:20:25:44:100%:99:9.6314E-27:0:0:0:0:45 MTB_anc 3874725 . T A . PASS AC=1;AF=3.378e-03;AN=296;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3874725T>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3874725T>A||||||,A|intragenic_variant|MODIFIER|Rv3453_Rv3453|gene3529|gene_variant|gene3529|||n.3874725T>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:47 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:21 0/0:33:1:1:0:42:2.38%:66:5E-1:40:41:17:24:44 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:29 0/0:24:1:1:0:24:4.17%:34:5E-1:46:23:7:16:24 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 0/0:32:2:2:0:34:5.88%:43:2.4627E-1:41:32:12:20:34 0/0:60:1:0:1:21:4.76%:31:5E-1:44:20:8:12:21 0/0:0:0:0:0:31:0%:59:1E0:48:31:11:20:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:25:0%:48:1E0:50:25:9:16:25 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:47 0/0:32:1:1:0:22:4.55%:31:5E-1:40:21:9:12:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:33:1:0:1:23:4.35%:34:5E-1:45:22:11:11:24 0/0:0:0:0:0:19:0%:37:1E0:44:19:6:13:19 0/0:60:1:0:1:29:3.45%:45:5E-1:44:28:18:10:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:12:21:34 ./. 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:40 0/0:0:0:0:0:21:0%:40:1E0:50:21:9:12:21 0/0:32:2:1:1:42:4.76%:57:2.4699E-1:45:40:16:24:43 0/0:32:2:1:1:32:6.25%:40:2.4603E-1:38:30:18:12:32 0/1:43:29:19:10:29:50%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:33:1:0:1:19:5.26%:28:5E-1:39:18:8:10:19 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:20 0/0:60:1:1:0:22:4.55%:31:5E-1:49:21:12:9:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:33:1:1:0:21:4.76%:31:5E-1:45:20:8:12:21 0/0:37:1:1:0:29:3.45%:45:5E-1:45:28:11:17:29 0/0:0:0:0:0:25:0%:48:1E0:39:25:9:16:25 0/0:32:1:1:0:38:2.63%:58:5E-1:45:37:20:17:38 0/0:60:1:1:0:38:2.63%:58:5E-1:43:37:22:15:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:40 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:47 0/0:34:2:1:1:45:4.44%:64:2.4719E-1:43:43:23:20:45 0/0:34:1:1:0:44:2.27%:69:5E-1:46:43:18:25:44 0/0:32:1:0:1:30:3.33%:44:5E-1:44:29:12:17:30 0/0:32:1:1:0:36:2.78%:55:5E-1:42:35:18:17:36 0/0:33:1:0:1:23:4.35%:34:5E-1:44:22:13:9:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:48:2:2:0:25:8%:31:2.449E-1:41:23:10:13:25 0/0:34:1:0:1:34:2.94%:51:5E-1:43:33:19:14:34 0/0:33:2:0:2:18:11.11%:18:2.4286E-1:42:16:9:7:19 0/0:0:0:0:0:31:0%:59:1E0:38:31:6:25:32 0/0:33:2:1:1:38:5.26%:50:2.4667E-1:44:36:15:21:40 0/0:33:1:1:0:39:2.56%:62:5E-1:49:38:17:21:39 0/0:0:0:0:0:17:0%:33:1E0:45:17:6:11:18 0/0:33:2:1:1:25:8%:31:2.449E-1:40:23:9:14:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:22:7:29 0/0:47:2:1:1:30:6.67%:37:2.4576E-1:44:28:11:17:30 0/0:34:2:0:2:27:7.41%:34:2.4528E-1:39:25:17:8:27 0/0:60:1:1:0:53:1.89%:88:5E-1:43:52:23:29:53 0/0:29:1:0:1:29:3.45%:45:5E-1:42:28:13:15:29 0/0:33:2:1:1:22:9.09%:24:2.4419E-1:45:20:8:12:22 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:40 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 0/0:32:1:0:1:37:2.7%:59:5E-1:39:36:15:21:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:33:1:0:1:26:3.85%:38:5E-1:43:25:10:15:26 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:33:2:0:2:64:3.12%:94:2.4803E-1:45:62:26:36:65 0/0:47:2:1:1:24:8.33%:27:2.4468E-1:44:22:7:15:24 0/0:60:1:1:0:30:3.33%:44:5E-1:44:29:14:15:30 0/0:32:2:1:1:13:15.38%:13:2.4E-1:43:11:3:8:14 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:19 0/0:33:1:0:1:40:2.5%:62:5E-1:41:39:14:25:40 0/0:0:0:0:0:34:0%:62:1E0:47:34:10:24:35 0/0:47:2:1:1:30:6.67%:37:2.4576E-1:47:28:10:18:31 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:28:0%:51:1E0:39:28:12:16:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:32:1:0:1:31:3.23%:48:5E-1:46:30:12:18:31 ./. 0/0:33:1:0:1:34:2.94%:51:5E-1:42:33:19:14:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:33:1:0:1:21:4.76%:31:5E-1:43:20:8:12:21 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:47 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:60:2:0:2:32:6.25%:40:2.4603E-1:49:30:16:14:33 0/0:33:1:1:0:27:3.7%:41:5E-1:45:26:12:14:27 0/0:37:1:1:0:26:3.85%:38:5E-1:39:25:7:18:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:33 0/0:32:3:1:2:20:15%:16:1.1538E-1:44:17:6:11:20 0/0:0:0:0:0:32:0%:59:1E0:46:32:11:21:32 0/0:0:0:0:0:29:0%:55:1E0:50:29:11:18:29 0/0:33:1:0:1:33:3.03%:52:5E-1:46:32:16:16:35 0/0:33:1:0:1:25:4%:38:5E-1:46:24:8:16:25 0/0:0:0:0:0:40:0%:74:1E0:38:40:16:24:41 0/0:32:1:0:1:23:4.35%:34:5E-1:38:22:11:11:23 0/0:0:0:0:0:35:0%:67:1E0:40:35:13:22:35 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:29:3:2:1:24:12.5%:22:1.1702E-1:39:21:10:11:24 0/0:33:1:0:1:38:2.63%:58:5E-1:40:37:15:22:38 0/0:32:3:2:1:36:8.33%:40:1.1972E-1:41:33:11:22:36 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:34:1:0:1:25:4%:38:5E-1:44:24:8:16:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:32:1:0:1:34:2.94%:51:5E-1:40:33:20:13:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:33:1:0:1:18:5.56%:24:5E-1:41:17:8:9:19 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:23 0/0:32:1:0:1:32:3.12%:48:5E-1:42:31:19:12:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:28 0/0:60:1:1:0:36:2.78%:55:5E-1:42:35:18:17:36 0/0:32:1:0:1:35:2.86%:55:5E-1:39:34:13:21:35 0/0:0:0:0:0:39:0%:74:1E0:40:39:10:29:39 0/0:0:0:0:0:31:0%:59:1E0:38:31:13:18:31 0/0:35:1:0:1:30:3.33%:44:5E-1:38:29:12:17:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:33:1:0:1:56:1.79%:91:5E-1:44:55:18:37:56 0/0:0:0:0:0:59:0%:99:1E0:41:59:31:28:59 0/0:33:2:1:1:28:7.14%:34:2.4545E-1:43:26:12:14:29 0/0:38:1:1:0:34:2.94%:51:5E-1:42:33:11:22:34 0/0:32:3:1:2:48:6.25%:59:1.2105E-1:36:45:19:26:49 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:45:0%:85:1E0:38:45:20:25:47 0/0:33:1:0:1:31:3.23%:48:5E-1:38:30:11:19:31 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:47 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:32 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:45 0/0:33:1:0:1:34:2.94%:51:5E-1:37:33:14:19:35 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:35 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:39 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:36 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:27 0/0:0:0:0:0:51:0%:97:1E0:37:51:26:25:51 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 0/0:34:1:0:1:34:2.94%:51:5E-1:44:33:19:14:35 0/0:32:1:1:0:30:3.33%:44:5E-1:40:29:14:15:30 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:33 0/0:33:1:0:1:34:2.94%:51:5E-1:41:33:17:16:36 0/0:33:1:0:1:38:2.63%:58:5E-1:42:37:17:20:38 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:46 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:27 0/0:33:2:1:1:45:4.44%:64:2.4719E-1:40:43:17:26:45 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:42 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:20:25:45 MTB_anc 3874725 . TC T . PASS AC=2;AF=0.500;AN=4;ANN=T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3874726delC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3874726delC||||||,T|intragenic_variant|MODIFIER|Rv3453_Rv3453|gene3529|gene_variant|gene3529|||n.3874726delC||||||;HET=1;HOM=0;NC=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:27:21:11:10:19:70%:99:1.8578E-12:0:0:0:0:21 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:40:31:18:13:31:50%:99:1.8007E-17:60:1:0:1:33 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. MTB_anc 3874726 . C A . PASS AC=292;AF=0.993;AN=294;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3874726C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3874726C>A||||||,A|intragenic_variant|MODIFIER|Rv3453_Rv3453|gene3529|gene_variant|gene3529|||n.3874726C>A||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:41:17:24:42:97.62%:99:2.5612E-23:34:1:1:0:44 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:30:12:18:31:96.77%:99:6.8754E-17:33:1:1:0:33 1/1:44:20:8:12:21:95.24%:99:4.0873E-11:60:1:0:1:21 1/1:49:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:50:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:21:9:12:22:95.45%:99:1.0931E-11:33:1:1:0:22 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:21 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:16:24:42:95.24%:99:5.6346E-22:34:2:1:1:43 1/1:38:28:17:11:30:93.33%:99:4.194E-15:33:2:1:1:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:29 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:18:8:10:19:94.74%:92:5.6585E-10:33:1:0:1:19 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:21:12:9:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:28:11:17:29:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:20:17:38:97.37%:99:5.6582E-21:33:1:1:0:38 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:43:23:20:44:97.73%:99:1.7144E-24:34:1:0:1:44 1/1:46:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:33:16:17:34:97.06%:99:1.2301E-18:33:1:1:0:36 1/1:44:22:13:9:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:22:9:13:23:95.65%:99:2.9149E-12:37:1:1:0:24 1/1:42:32:18:14:33:96.97%:99:4.7095E-18:35:1:0:1:34 1/1:42:17:9:8:18:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:39:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:44:35:14:21:36:97.22%:99:8.3613E-20:34:1:1:0:39 1/1:48:38:17:21:39:97.44%:99:1.4697E-21:32:1:1:0:39 1/1:45:17:6:11:18:94.44%:86:2.0936E-9:29:1:1:0:18 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:25:17:8:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:43:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:28:13:15:29:96.55%:99:9.9776E-16:33:1:0:1:29 1/1:44:20:8:12:21:95.24%:99:4.0873E-11:33:1:0:1:21 1/1:42:39:15:24:40:97.5%:99:3.8137E-22:33:1:0:1:40 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:37:16:21:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:24:9:15:25:96%:99:2.0568E-13:34:1:0:1:26 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:62:26:36:64:96.88%:99:8.9557E-35:33:2:0:2:65 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:14:15:30:100%:99:3.3259E-17:0:0:0:0:30 0/1:42:12:3:9:14:85.71%:55:2.9913E-6:33:2:1:1:14 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:41:39:14:25:40:97.5%:99:3.8137E-22:34:1:0:1:40 1/1:46:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:27:10:17:28:96.43%:99:3.7915E-15:34:1:0:1:30 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:12:18:31:96.77%:99:6.8754E-17:32:1:0:1:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:32 1/1:43:30:17:13:31:96.77%:99:6.8754E-17:33:1:0:1:34 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:19:8:11:20:95%:98:1.5234E-10:33:1:0:1:21 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:17:14:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:45:26:12:14:27:96.3%:99:1.4382E-14:33:1:1:0:27 1/1:38:26:8:18:27:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 0/1:45:16:5:11:18:88.89%:76:2.0936E-8:33:2:1:1:19 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:15:17:33:96.97%:99:4.7095E-18:34:1:0:1:35 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:21:11:10:22:95.45%:99:1.0931E-11:33:1:0:1:23 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:19:10:9:20:95%:98:1.5234E-10:32:1:1:0:22 1/1:40:37:15:22:38:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:41:32:11:21:34:94.12%:99:2.2142E-17:33:2:1:1:35 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:25:8:17:26:96.15%:99:5.4444E-14:34:1:0:1:26 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:34:21:13:35:97.14%:99:3.2089E-19:32:1:0:1:35 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:45:22:13:9:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:31:19:12:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:18:17:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:39:32:12:20:33:96.97%:99:4.7095E-18:31:1:0:1:35 1/1:40:35:8:27:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:55:18:37:56:98.21%:99:1.4593E-31:34:1:0:1:56 1/1:41:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:25:12:13:26:96.15%:99:5.4444E-14:25:1:1:0:28 1/1:42:32:10:22:33:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:45:19:26:46:97.83%:99:1.1441E-25:32:1:0:1:47 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:36:31:13:18:32:96.88%:99:1.8007E-17:33:1:0:1:35 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:27 1/1:37:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:32:19:13:34:94.12%:99:2.2142E-17:30:2:1:1:35 1/1:41:29:14:15:30:96.67%:99:2.6212E-16:32:1:1:0:30 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:34:16:18:35:97.14%:99:3.2089E-19:34:1:0:1:36 1/1:42:36:15:21:37:97.3%:99:2.1762E-20:33:1:0:1:39 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:41:17:24:42:97.62%:99:2.5612E-23:34:1:0:1:44 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 MTB_anc 3875126 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3875126A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3875126A>C||||||,C|intragenic_variant|MODIFIER|Rv3453_Rv3453|gene3529|gene_variant|gene3529|||n.3875126A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:42:24:18:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:28:16:12:29:96.55%:99:9.9776E-16:60:1:0:1:30 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:39:26:13:40:97.5%:99:3.8137E-22:38:1:0:1:41 1/1:53:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:10:15:26:96.15%:99:5.4444E-14:37:1:1:0:27 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:72:32:40:72:100%:99:6.7558E-43:0:0:0:0:73 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:18:11:7:19:94.74%:92:5.6585E-10:60:1:1:0:19 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:31:15:16:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:61:32:29:61:100%:99:2.609E-36:0:0:0:0:63 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:52:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:43:21:22:44:97.73%:99:1.7144E-24:38:1:1:0:45 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:36:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:48:23:25:49:97.96%:99:1.9625E-27:60:1:0:1:49 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:42:22:20:43:97.67%:99:6.6289E-24:38:1:1:0:43 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 3876788 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|truA_Rv3455c|gene3530|transcript|Transcript_gene3530|Coding|1/1|c.35C>T|p.Ala12Val|35/771|35/771|12/256||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.3876788G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3876788G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:28:9:19:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:42:7:35:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:43:11:32:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:24:7:17:25:100%:99:3.101E-14:0:0:0:0:25 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:49:17:32:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:37:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:48:16:32:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:35:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:38:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:36:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:50:12:38:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:36:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 MTB_anc 3877017 . T G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|rplQ_Rv3456c|gene3531|transcript|Transcript_gene3531|Coding|1/1|c.416A>C|p.Lys139Thr|416/543|416/543|139/180||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.3877017T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.3877017T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:51 0/0:0:0:0:0:17:0%:33:1E0:48:17:11:6:17 0/0:0:0:0:0:50:0%:92:1E0:47:50:27:23:50 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:29 0/0:0:0:0:0:39:0%:74:1E0:48:39:13:26:39 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:25:0%:48:1E0:53:25:10:15:25 0/0:0:0:0:0:27:0%:52:1E0:52:27:8:19:27 0/0:0:0:0:0:31:0%:59:1E0:50:31:13:18:32 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:40 0/0:0:0:0:0:22:0%:40:1E0:52:22:8:14:22 0/0:0:0:0:0:49:0%:93:1E0:45:49:28:21:49 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:32 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:21 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:18:0%:32:1E0:47:18:7:11:19 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:33 0/0:0:0:0:0:58:0%:99:1E0:46:58:32:26:58 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:20 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:38 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:21:10:31 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:30:0%:55:1E0:51:30:17:13:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:35 0/0:0:0:0:0:29:0%:55:1E0:52:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:43 0/0:0:0:0:0:39:0%:74:1E0:49:39:21:18:39 0/0:0:0:0:0:51:0%:97:1E0:48:51:26:25:52 0/0:0:0:0:0:33:0%:63:1E0:43:33:11:22:33 0/0:0:0:0:0:44:0%:81:1E0:43:44:18:26:44 0/0:0:0:0:0:29:0%:55:1E0:47:29:9:20:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:32 0/0:0:0:0:0:39:0%:74:1E0:47:39:18:21:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:25 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:46 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:29 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:48 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:54:0%:99:1E0:47:54:30:24:55 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:26:9:36 0/0:0:0:0:0:36:0%:66:1E0:46:36:10:26:36 0/0:0:0:0:0:46:0%:85:1E0:45:46:21:25:47 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:29 0/0:0:0:0:0:53:0%:99:1E0:48:53:28:25:53 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:20:19:41 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:38:0%:70:1E0:50:38:18:20:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:51:27:14:13:28 0/0:0:0:0:0:38:0%:70:1E0:51:38:14:24:38 0/0:0:0:0:0:49:0%:93:1E0:43:49:22:27:50 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:26:0%:47:1E0:49:26:10:16:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:29 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:11:24:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:51:38:17:21:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:38:0%:70:1E0:50:38:17:21:38 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:27 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:47 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:48:0%:89:1E0:44:48:18:30:48 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:43 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:26 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:23 0/0:0:0:0:0:44:0%:81:1E0:43:44:16:28:45 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:43 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:24 0/0:0:0:0:0:35:0%:67:1E0:49:35:16:19:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:32 0/0:0:0:0:0:29:0%:55:1E0:46:29:9:20:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:62:0%:99:1E0:43:62:30:32:62 0/0:0:0:0:0:38:0%:70:1E0:42:38:15:23:38 0/0:0:0:0:0:23:0%:44:1E0:46:23:6:17:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:24 0/0:0:0:0:0:54:0%:99:1E0:41:54:25:29:55 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:36 0/0:0:0:0:0:48:0%:89:1E0:41:48:19:29:48 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:42 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:24:10:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:30 0/0:0:0:0:0:56:0%:99:1E0:39:56:29:27:59 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:35 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:54 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:36 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:10:25:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:45 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:44:0%:81:1E0:44:44:16:28:44 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:49 0/0:0:0:0:0:49:0%:93:1E0:46:49:25:24:51 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 MTB_anc 3883774 . A G . PASS AC=1;AF=4.132e-03;AN=242;ANN=G|missense_variant|MODERATE|Rv3466_Rv3466|gene3541|transcript|Transcript_gene3541|Coding|1/1|c.250A>G|p.Ile84Val|250/669|250/669|84/222||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3883774A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3883774A>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:17:0%:33:1E0:37:17:4:13:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:10 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:37:12:3:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:25:1E0:37:13:2:11:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:16:0%:29:1E0:36:16:1:15:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:7 0/0:0:0:0:0:8:0%:14:1E0:37:8:1:7:8 0/0:0:0:0:0:7:0%:14:1E0:35:7:0:7:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:8 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:14 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:8 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:11 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:15 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:9 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:21 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:10 0/0:0:0:0:0:11:0%:22:1E0:35:11:8:3:11 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:19 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:11 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 0/0:0:0:0:0:10:0%:17:1E0:35:10:0:10:10 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:37:7:1:6:9 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 0/0:0:0:0:0:17:0%:33:1E0:38:17:4:13:18 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:9 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:11 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:22 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:8 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:15 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:9 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:10 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:8 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:11 0/0:0:0:0:0:11:0%:22:1E0:39:11:4:7:11 0/0:0:0:0:0:12:0%:21:1E0:37:12:0:12:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:12 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:16 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:8:0%:14:1E0:39:8:1:7:9 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:17 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:10 0/0:0:0:0:0:14:0%:25:1E0:37:14:4:10:14 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:13 0/0:0:0:0:0:11:0%:22:1E0:34:11:4:7:12 0/0:0:0:0:0:8:0%:14:1E0:33:8:3:5:9 0/0:0:0:0:0:10:0%:17:1E0:37:10:1:9:10 0/0:0:0:0:0:12:0%:21:1E0:37:12:1:11:12 0/0:0:0:0:0:8:0%:14:1E0:37:8:1:7:10 0/0:0:0:0:0:7:0%:14:1E0:38:7:0:7:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:35:12:2:10:12 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:15 0/0:0:0:0:0:7:0%:14:1E0:36:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:10 0/0:0:0:0:0:11:0%:22:1E0:37:11:2:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:36:14:3:11:14 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:9 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:14 0/0:0:0:0:0:11:0%:22:1E0:37:11:1:10:11 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:10:0%:17:1E0:40:10:1:9:10 0/0:0:0:0:0:14:0%:25:1E0:36:14:2:12:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:35:10:3:7:10 0/0:0:0:0:0:9:0%:18:1E0:38:9:3:6:10 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:11 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:10 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:15 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:13 0/0:0:0:0:0:12:0%:21:1E0:35:12:1:11:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:9 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:9 0/0:0:0:0:0:9:0%:18:1E0:35:9:1:8:11 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:8 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:10 0/0:0:0:0:0:28:0%:51:1E0:36:28:6:22:29 0/0:0:0:0:0:12:0%:21:1E0:36:12:1:11:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:25:1E0:34:13:2:11:13 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:13 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:10 0/0:0:0:0:0:10:0%:17:1E0:35:10:3:7:14 0/0:0:0:0:0:12:0%:21:1E0:37:12:0:12:13 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:17 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:8 0/0:0:0:0:0:12:0%:21:1E0:37:12:3:9:12 0/0:0:0:0:0:7:0%:14:1E0:34:7:1:6:8 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:11 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:9 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:14 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:10 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 0/0:0:0:0:0:18:0%:32:1E0:36:18:1:17:18 0/0:0:0:0:0:13:0%:25:1E0:36:13:3:10:13 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:9 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:11 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:14 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 0/0:0:0:0:0:9:0%:18:1E0:36:9:5:4:10 0/1:36:8:3:5:11:72.73%:32:5.16E-4:37:3:0:3:11 0/0:0:0:0:0:10:0%:17:1E0:36:10:0:10:12 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:9 0/0:0:0:0:0:14:0%:25:1E0:35:14:3:11:14 0/0:0:0:0:0:17:0%:33:1E0:38:17:2:15:17 0/0:0:0:0:0:19:0%:37:1E0:36:19:3:16:19 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:9 MTB_anc 3883845 . C T . PASS AC=194;AF=1.00;AN=194;ANN=T|synonymous_variant|LOW|Rv3466_Rv3466|gene3541|transcript|Transcript_gene3541|Coding|1/1|c.321C>T|p.Gly107Gly|321/669|321/669|107/222||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3883845C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3883845C>T||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:38:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:10 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:24:2:22:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:12 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 MTB_anc 3883915 . A G . PASS AC=92;AF=1.00;AN=92;ANN=G|missense_variant|MODERATE|Rv3466_Rv3466|gene3541|transcript|Transcript_gene3541|Coding|1/1|c.391A>G|p.Ile131Val|391/669|391/669|131/222||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3883915A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.3883915A>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 MTB_anc 3885173 . G A . PASS AC=298;AF=1.00;AN=298;ANN=A|synonymous_variant|LOW|rmlB3_Rv3468c|gene3543|transcript|Transcript_gene3543|Coding|1/1|c.897C>T|p.Pro299Pro|897/1095|897/1095|299/364||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3885173G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3885173G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:39:21:10:11:22:95.45%:99:1.0931E-11:33:1:1:0:23 1/1:39:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:44 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:22 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:17 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:33:15:18:34:97.06%:99:1.2301E-18:24:1:1:0:39 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:18 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:38:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:42:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:40:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:40:20:9:11:21:95.24%:99:4.0873E-11:24:1:1:0:25 1/1:38:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:44 1/1:42:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:46 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:35 1/1:38:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:24:12:12:25:96%:99:2.0568E-13:37:1:1:0:27 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:29 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:29 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:36 1/1:36:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:38:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:38:23:11:12:24:95.83%:99:7.7525E-13:33:1:1:0:30 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:47 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:41:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:23 1/1:36:25:18:7:26:96.15%:99:5.4444E-14:25:1:1:0:29 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:23 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:44 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:31:17:14:33:93.94%:99:8.2416E-17:33:2:2:0:41 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:25 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:43:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:24 1/1:37:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:36:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:39:29:17:12:30:96.67%:99:3.3259E-17:0:0:0:0:32 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:34:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:39:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:28 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:16 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:15:7:8:16:93.75%:75:2.8282E-8:27:1:1:0:21 1/1:41:19:10:9:20:95%:98:1.5234E-10:33:1:1:0:23 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:28 1/1:37:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:36:20:11:9:22:90.91%:99:4.0873E-11:27:1:1:0:29 1/1:34:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:50 1/1:36:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:36:20:11:9:21:95.24%:99:4.0873E-11:27:1:1:0:30 1/1:35:10:4:6:11:90.91%:47:1.7011E-5:24:1:1:0:17 1/1:35:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:39 1/1:36:16:7:9:17:94.12%:81:7.7134E-9:38:1:1:0:21 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:27 1/1:37:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:37 1/1:35:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:35 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:25:10:15:26:96.15%:99:7.9107E-15:0:0:0:0:33 1/1:35:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:21 1/1:34:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:32:12:9:3:12:100%:64:3.698E-7:0:0:0:0:16 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:22 1/1:37:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:37 1/1:38:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:37:21:11:10:23:91.3%:99:3.6437E-11:31:2:1:1:29 1/1:37:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:35:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:35:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:39:21:7:14:22:95.45%:99:1.0931E-11:24:1:1:0:24 1/1:36:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 MTB_anc 3887921 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|ilvB2_Rv3470c|gene3545|transcript|Transcript_gene3545|Coding|1/1|c.882T>C|p.Phe294Phe|882/1659|882/1659|294/552||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3887921A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3887921A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:48 1/1:42:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:39:37:16:21:38:97.37%:99:5.6582E-21:37:1:0:1:42 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:39:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:35:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:40:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:36:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:57 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:37:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:37:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:52 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:36:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:25 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:39:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:60 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:37:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:29 1/1:40:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:24 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:35 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:21 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:35:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:34:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:35:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:39:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:34:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:42 1/1:34:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:35:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:36:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:35 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:28 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:35:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:36:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:37:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:25 1/1:36:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:35:23:12:11:24:95.83%:99:7.7525E-13:31:1:1:0:26 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:35:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:38:33:13:20:34:97.06%:99:1.2301E-18:38:1:1:0:37 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:35 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:36:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:38:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:51 1/1:37:38:24:14:39:97.44%:99:1.4508E-22:0:0:0:0:43 1/1:35:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 MTB_anc 3893480 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3893480A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3893480A>G||||||,G|intragenic_variant|MODIFIER|kgtP_Rv3476c|gene3549|gene_variant|gene3549|||n.3893480A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:50:22:28:51:98.04%:99:1.3013E-28:29:1:1:0:53 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:49:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:12:14:27:96.3%:99:1.4382E-14:36:1:1:0:27 1/1:41:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:50:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:40:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:49:25:24:50:98%:99:3.925E-29:0:0:0:0:52 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 MTB_anc 3894434 . T C . PASS AC=5;AF=0.017;AN=300;ANN=C|synonymous_variant|LOW|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.9T>C|p.Asp3Asp|9/1182|9/1182|3/393||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3894434T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3894434T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:46 0/0:0:0:0:0:23:0%:44:1E0:49:23:17:6:23 0/0:0:0:0:0:54:0%:99:1E0:49:54:22:32:55 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/1:47:16:12:4:40:40%:56:2.3315E-6:43:24:12:12:40 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:53:33:19:14:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:11:19:30 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:22 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:39 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:47 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:26 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:39:2:1:1:23:8.7%:28:2.4444E-1:42:21:12:9:24 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:24 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:45 0/1:53:14:6:8:29:48.28%:51:7.6466E-6:47:15:7:8:30 0/0:0:0:0:0:45:0%:85:1E0:47:45:30:15:47 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:38 0/0:0:0:0:0:22:0%:40:1E0:51:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:19:9:28 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:35 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:20:0%:36:1E0:48:20:15:5:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:52:0%:96:1E0:47:52:28:24:52 0/0:0:0:0:0:54:0%:99:1E0:45:54:27:27:54 0/0:0:0:0:0:47:0%:89:1E0:48:47:23:24:48 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:47 0/0:0:0:0:0:51:0%:97:1E0:43:51:26:25:51 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:23:0%:44:1E0:45:23:15:8:23 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:22:20:44 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:43:0%:82:1E0:48:43:21:22:44 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:22 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:45 0/0:0:0:0:0:19:0%:37:1E0:48:19:7:12:19 0/0:0:0:0:0:24:0%:44:1E0:43:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:27 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:50 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:43 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:45:0%:85:1E0:42:45:29:16:46 0/0:38:1:0:1:44:2.27%:69:5E-1:51:43:23:20:45 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:27 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:32 0/0:0:0:0:0:33:0%:63:1E0:50:33:12:21:33 0/0:0:0:0:0:39:0%:74:1E0:49:39:20:19:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:32 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:19 0/0:0:0:0:0:19:0%:37:1E0:51:19:11:8:19 0/0:38:1:0:1:30:3.33%:44:5E-1:49:29:15:14:31 0/1:46:14:9:5:22:63.64%:55:2.7817E-6:52:8:5:3:22 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:25 0/0:0:0:0:0:35:0%:67:1E0:51:35:18:17:37 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:47 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:38:0%:70:1E0:49:38:15:23:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:48:0%:89:1E0:41:48:16:32:48 0/0:0:0:0:0:22:0%:40:1E0:49:22:9:13:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:20:9:31 0/0:60:1:0:1:33:3.03%:52:5E-1:41:32:14:18:34 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:23 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:42 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:49:2:2:0:24:8.33%:27:2.4468E-1:45:22:15:7:25 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:19 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:43 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:23 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:21:5:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:19 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:29 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:46 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/1:40:9:5:4:26:34.62%:30:8.4928E-4:43:17:10:7:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:31 0/0:0:0:0:0:62:0%:99:1E0:41:62:29:33:63 0/0:0:0:0:0:60:0%:99:1E0:44:60:37:23:61 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:29 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:48 0/0:0:0:0:0:46:0%:85:1E0:39:46:23:23:46 0/0:0:0:0:0:51:0%:97:1E0:42:51:26:25:52 0/0:0:0:0:0:43:0%:82:1E0:39:43:25:18:44 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:44 0/0:0:0:0:0:31:0%:59:1E0:39:31:13:18:31 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:48 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:40 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:56:0%:99:1E0:39:56:28:28:57 0/0:50:1:0:1:40:2.5%:62:5E-1:39:39:23:16:40 0/0:0:0:0:0:41:0%:78:1E0:43:41:26:15:41 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:38:0%:70:1E0:45:38:24:14:38 0/0:0:0:0:0:19:0%:37:1E0:43:19:11:8:20 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:52 0/1:45:8:5:3:41:19.51%:25:2.6808E-3:41:33:16:17:41 0/0:0:0:0:0:46:0%:85:1E0:40:46:31:15:46 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:38 MTB_anc 3894440 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.15G>A|p.Gly5Gly|15/1182|15/1182|5/393||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3894440G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3894440G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:42:45:23:22:46 0/0:0:0:0:0:22:0%:40:1E0:49:22:15:7:22 0/0:0:0:0:0:54:0%:99:1E0:49:54:22:32:54 0/0:0:0:0:0:23:0%:44:1E0:50:23:10:13:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:26 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:40 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:11:19:30 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:23 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:38 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:18 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:49 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:17:7:26 0/0:0:0:0:0:16:0%:29:1E0:49:16:8:8:16 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:22 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:24 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:45 0/0:0:0:0:0:27:0%:52:1E0:50:27:13:14:28 0/0:0:0:0:0:44:0%:81:1E0:47:44:30:14:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:20:0%:36:1E0:48:20:14:6:20 0/0:37:1:1:0:31:3.23%:48:5E-1:45:30:19:11:31 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:53:0%:99:1E0:46:53:29:24:53 0/0:0:0:0:0:50:0%:92:1E0:45:50:24:26:52 0/0:0:0:0:0:48:0%:89:1E0:47:48:24:24:48 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:44 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:50 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:17 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:42 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:43 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:39 0/0:0:0:0:0:44:0%:81:1E0:47:44:22:22:45 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:28:18:51 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:47:0%:89:1E0:42:47:29:18:47 0/0:0:0:0:0:44:0%:81:1E0:50:44:22:22:46 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:32:1:0:1:41:2.44%:66:5E-1:43:40:18:22:42 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:32:0%:59:1E0:49:32:11:21:32 0/0:0:0:0:0:38:0%:70:1E0:49:38:19:19:38 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:0:0:0:0:16:0%:29:1E0:50:16:9:7:16 0/0:0:0:0:0:19:0%:37:1E0:51:19:11:8:19 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:31 0/0:0:0:0:0:22:0%:40:1E0:49:22:14:8:22 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:50:35:16:19:35 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:47 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:47:0%:89:1E0:41:47:16:31:47 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:36 0/0:0:0:0:0:21:0%:40:1E0:43:21:14:7:23 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:40:0%:74:1E0:45:40:15:25:41 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:25 0/0:0:0:0:0:18:0%:32:1E0:50:18:8:10:19 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:41 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:26 0/0:0:0:0:0:19:0%:37:1E0:44:19:13:6:21 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:21:5:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:36 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:17 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:31 0/0:0:0:0:0:17:0%:33:1E0:47:17:12:5:17 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:44 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:18:10:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:26 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:36 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:25:0%:48:1E0:39:25:12:13:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:63:0%:99:1E0:40:63:30:33:63 0/0:0:0:0:0:60:0%:99:1E0:43:60:37:23:61 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:29 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:44:0%:81:1E0:40:44:24:20:49 0/0:0:0:0:0:41:0%:78:1E0:38:41:20:21:46 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:51 0/0:0:0:0:0:41:0%:78:1E0:38:41:23:18:45 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:35 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:25:17:45 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:32 0/0:0:0:0:0:41:0%:78:1E0:40:41:19:22:44 0/0:0:0:0:0:35:0%:67:1E0:40:35:21:14:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:39 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:54:0%:99:1E0:39:54:29:25:57 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:40 0/0:38:1:1:0:39:2.56%:62:5E-1:42:38:23:15:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:40 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:38 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:20 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:41 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:53:0%:99:1E0:41:53:26:27:53 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:40 0/0:0:0:0:0:44:0%:81:1E0:39:44:31:13:46 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:38 MTB_anc 3894476 . C T . PASS AC=10;AF=0.033;AN=300;ANN=T|synonymous_variant|LOW|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.51C>T|p.Tyr17Tyr|51/1182|51/1182|17/393||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3894476C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3894476C>T||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:45 0/0:0:0:0:0:23:0%:44:1E0:50:23:15:8:23 0/0:0:0:0:0:52:0%:96:1E0:48:52:24:28:52 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:20 0/0:0:0:0:0:35:0%:67:1E0:50:35:22:13:36 0/0:38:1:0:1:28:3.57%:41:5E-1:48:27:12:15:28 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:0:0:0:0:47:0%:89:1E0:44:47:25:22:47 0/0:60:1:1:0:29:3.45%:45:5E-1:41:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:27 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:37:2:1:1:23:8.7%:28:2.4444E-1:44:21:12:9:23 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:22:0%:40:1E0:49:22:8:14:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:26 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/1:51:14:5:9:21:66.67%:56:2.1998E-6:50:7:4:3:21 0/0:0:0:0:0:38:0%:70:1E0:50:38:25:13:39 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:26:0%:47:1E0:49:26:16:10:26 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:25 0/0:0:0:0:0:25:0%:48:1E0:48:25:18:7:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:0:31:0%:59:1E0:48:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:17:0%:33:1E0:51:17:11:6:17 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:33:1:0:1:18:5.56%:24:5E-1:46:17:10:7:18 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:23 0/0:48:6:3:3:47:12.77%:42:1.3188E-2:50:41:22:19:48 0/1:47:33:12:21:47:70.21%:99:1.3848E-14:46:14:10:4:47 0/0:0:0:0:0:47:0%:89:1E0:48:47:24:23:47 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:43 0/0:0:0:0:0:52:0%:96:1E0:43:52:28:24:52 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:20 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:44 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:43 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:20 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:48:0%:89:1E0:41:48:30:18:49 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:26:0%:47:1E0:45:26:20:6:26 0/0:37:1:0:1:46:2.17%:73:5E-1:44:45:28:17:46 0/0:0:0:0:0:43:0%:82:1E0:47:43:24:19:43 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/1:51:9:3:6:29:31.03%:30:9.4048E-4:46:20:7:13:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:36 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:21:0%:40:1E0:50:21:13:8:21 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/1:52:12:9:3:21:57.14%:45:2.658E-5:46:9:5:4:21 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:33:0%:63:1E0:51:33:16:17:33 0/0:60:1:0:1:45:2.22%:73:5E-1:45:44:23:21:45 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:25 0/0:49:2:1:1:36:5.56%:47:2.4648E-1:47:34:16:18:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:24:12:36 0/0:60:1:1:0:31:3.23%:48:5E-1:44:30:20:10:31 0/0:0:0:0:0:41:0%:78:1E0:45:41:29:12:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:34 0/0:0:0:0:0:44:0%:81:1E0:43:44:14:30:45 1/1:51:14:5:9:15:93.33%:69:1.0315E-7:39:1:1:0:15 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 0/0:60:1:0:1:34:2.94%:51:5E-1:44:33:19:14:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:20:0%:36:1E0:53:20:8:12:20 0/0:60:1:1:0:35:2.86%:55:5E-1:47:34:11:23:35 0/0:49:2:1:1:24:8.33%:27:2.4468E-1:45:22:10:12:24 0/0:51:3:3:0:25:12%:25:1.1735E-1:48:22:16:6:26 0/0:60:1:0:1:19:5.26%:28:5E-1:47:18:9:9:20 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 1/1:43:35:17:18:37:94.59%:99:4.2437E-19:49:2:0:2:37 0/0:37:5:2:3:27:18.52%:19:2.5527E-2:45:22:11:11:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:25 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:21:5:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:38 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:30 0/0:0:0:0:0:15:0%:29:1E0:47:15:11:4:16 0/0:0:0:0:0:45:0%:85:1E0:43:45:27:18:46 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:19:6:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:35 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:26 0/0:48:6:2:4:26:23.08%:13:1.1309E-2:45:20:13:7:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:59:0%:99:1E0:42:59:29:30:60 0/0:0:0:0:0:56:0%:99:1E0:44:56:35:21:56 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:29 0/0:0:0:0:0:49:0%:93:1E0:39:49:27:22:51 0/0:0:0:0:0:50:0%:92:1E0:40:50:25:25:50 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:47 0/0:0:0:0:0:40:0%:74:1E0:39:40:24:16:40 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:36 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:46 0/0:0:0:0:0:31:0%:59:1E0:39:31:17:14:32 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:47 0/0:0:0:0:0:37:0%:70:1E0:40:37:24:13:38 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:45 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:51:0%:97:1E0:38:51:26:25:52 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:36 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:42 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:41 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:21:0%:40:1E0:42:21:12:9:21 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:40 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:57:0%:99:1E0:40:57:40:17:58 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:38 MTB_anc 3894588 . G A . PASS AC=13;AF=0.044;AN=294;ANN=A|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.163G>A|p.Val55Met|163/1182|163/1182|55/393||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3894588G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3894588G>A||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:40:42:26:16:43 0/0:0:0:0:0:13:0%:25:1E0:52:13:10:3:14 0/0:38:1:1:0:48:2.08%:76:5E-1:42:47:28:19:49 0/0:0:0:0:0:14:0%:25:1E0:43:14:8:6:15 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:20 0/0:42:4:3:1:19:21.05%:13:5.251E-2:43:15:8:7:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:37:2:2:0:16:12.5%:15:2.4194E-1:49:14:6:8:16 0/0:0:0:0:0:26:0%:47:1E0:42:26:19:7:26 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:39 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:12 0/0:0:0:0:0:39:0%:74:1E0:42:39:26:13:39 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:24 0/0:0:0:0:0:29:0%:55:1E0:38:29:22:7:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:36:1:0:1:18:5.56%:24:5E-1:41:17:10:7:18 0/0:0:0:0:0:26:0%:47:1E0:43:26:20:6:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:13:5:19 0/0:0:0:0:0:39:0%:74:1E0:42:39:27:12:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:49:2:2:0:36:5.56%:47:2.4648E-1:42:34:24:10:36 0/0:0:0:0:0:42:0%:77:1E0:40:42:28:14:44 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:24 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 1/1:41:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:27 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:23 0/0:60:1:1:0:41:2.44%:66:5E-1:43:40:25:15:43 0/1:43:12:7:5:26:46.15%:43:4.6796E-5:43:14:11:3:26 0/0:0:0:0:0:37:0%:70:1E0:41:37:28:9:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:28 0/0:0:0:0:0:41:0%:78:1E0:41:41:26:15:42 0/0:0:0:0:0:16:0%:29:1E0:42:16:11:5:16 0/0:0:0:0:0:26:0%:47:1E0:49:26:16:10:26 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:25:13:40 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:27 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:40 0/0:0:0:0:0:45:0%:85:1E0:41:45:28:17:45 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:38 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:19 0/0:0:0:0:0:30:0%:55:1E0:40:30:23:7:31 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:30 0/0:0:0:0:0:52:0%:96:1E0:39:52:39:13:53 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:37:24:19:5:24 0/0:0:0:0:0:44:0%:81:1E0:39:44:29:15:45 0/0:52:3:2:1:28:10.71%:28:1.1818E-1:46:25:14:11:29 0/0:0:0:0:0:27:0%:52:1E0:45:27:19:8:27 0/0:0:0:0:0:34:0%:62:1E0:38:34:26:8:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:34 0/0:37:1:0:1:21:4.76%:31:5E-1:38:20:13:7:21 0/1:46:8:2:6:15:53.33%:29:1.0995E-3:41:7:5:2:15 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:27:0%:52:1E0:43:27:20:7:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:28:10:40 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:23 0/0:38:2:1:1:19:10.53%:21:2.4324E-1:40:17:9:8:19 0/1:45:6:4:2:13:46.15%:21:7.4534E-3:46:7:5:2:13 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:21 0/1:46:10:3:7:14:71.43%:41:7.6278E-5:60:4:2:2:14 0/0:39:1:0:1:43:2.33%:70:5E-1:39:42:25:17:44 0/0:0:0:0:0:19:0%:37:1E0:41:19:14:5:19 0/0:0:0:0:0:23:0%:44:1E0:40:23:21:2:25 0/0:38:2:1:1:30:6.67%:37:2.4576E-1:44:28:19:9:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:22:6:28 0/0:0:0:0:0:18:0%:32:1E0:40:18:14:4:18 0/0:0:0:0:0:45:0%:85:1E0:38:45:40:5:45 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:27:0%:52:1E0:37:27:18:9:29 0/0:38:1:0:1:31:3.23%:48:5E-1:39:30:20:10:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:11:0%:22:1E0:44:11:6:5:11 0/0:47:5:3:2:28:17.86%:19:2.5729E-2:42:23:10:13:28 0/0:39:1:0:1:22:4.55%:31:5E-1:42:21:12:9:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:60:1:0:1:12:8.33%:14:5E-1:51:11:9:2:12 0/1:40:8:2:6:24:33.33%:27:1.949E-3:37:16:12:4:24 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 1/1:41:15:8:7:16:93.75%:75:2.8282E-8:38:1:1:0:16 0/0:49:6:3:3:20:30%:7:1.0098E-2:40:14:8:6:20 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:23 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:22:11:34 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:23 0/0:0:0:0:0:33:0%:63:1E0:39:33:22:11:33 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:37 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:30 0/0:37:2:1:1:11:18.18%:10:2.381E-1:39:9:7:2:11 0/0:0:0:0:0:23:0%:44:1E0:42:23:18:5:23 0/0:0:0:0:0:22:0%:40:1E0:39:22:18:4:22 0/0:0:0:0:0:36:0%:66:1E0:43:36:25:11:37 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:22:6:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:22:7:29 0/0:0:0:0:0:23:0%:44:1E0:40:23:18:5:23 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:17:0%:33:1E0:38:17:14:3:17 0/0:0:0:0:0:27:0%:52:1E0:37:27:15:12:30 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:33 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:31 0/0:38:2:2:0:22:9.09%:24:2.4419E-1:42:20:12:8:22 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:31 0/0:0:0:0:0:37:0%:70:1E0:39:37:27:10:37 0/0:0:0:0:0:52:0%:96:1E0:37:52:40:12:52 0/0:0:0:0:0:22:0%:40:1E0:41:22:18:4:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:19:7:26 0/0:0:0:0:0:40:0%:74:1E0:38:40:25:15:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:36 0/0:0:0:0:0:37:0%:70:1E0:38:37:26:11:38 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:37 0/0:0:0:0:0:31:0%:59:1E0:38:31:23:8:31 0/0:0:0:0:0:36:0%:66:1E0:36:36:21:15:37 0/0:0:0:0:0:37:0%:70:1E0:37:37:28:9:38 0/0:0:0:0:0:27:0%:52:1E0:36:27:18:9:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:36 0/0:0:0:0:0:31:0%:59:1E0:38:31:21:10:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:29:18:47 0/0:0:0:0:0:25:0%:48:1E0:42:25:18:7:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:35 0/0:0:0:0:0:36:0%:66:1E0:38:36:22:14:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:20:10:31 0/0:0:0:0:0:42:0%:77:1E0:37:42:29:13:44 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:23:9:32 0/0:0:0:0:0:27:0%:52:1E0:37:27:17:10:27 0/0:33:1:0:1:40:2.5%:62:5E-1:39:39:18:21:40 0/0:0:0:0:0:35:0%:67:1E0:42:35:27:8:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:21:9:31 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:35 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:55:0%:99:1E0:39:55:42:13:56 0/0:0:0:0:0:40:0%:74:1E0:39:40:25:15:40 MTB_anc 3894589 . T C . PASS AC=13;AF=0.044;AN=294;ANN=C|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.164T>C|p.Val55Ala|164/1182|164/1182|55/393||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3894589T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3894589T>C||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:39:42:26:16:43 0/0:0:0:0:0:13:0%:25:1E0:51:13:10:3:14 0/0:38:1:1:0:47:2.13%:77:5E-1:42:46:27:19:49 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:20 0/0:39:5:4:1:20:25%:10:2.3562E-2:42:15:8:7:20 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:24 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:37:2:2:0:16:12.5%:15:2.4194E-1:50:14:6:8:16 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:26 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:40 0/0:0:0:0:0:12:0%:21:1E0:43:12:7:5:12 0/0:0:0:0:0:37:0%:70:1E0:42:37:26:11:38 0/0:0:0:0:0:24:0%:44:1E0:37:24:15:9:24 0/0:0:0:0:0:30:0%:55:1E0:38:30:23:7:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:27 0/0:32:1:0:1:15:6.67%:21:5E-1:41:14:9:5:18 0/0:0:0:0:0:25:0%:48:1E0:43:25:19:6:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:29 0/0:0:0:0:0:19:0%:37:1E0:41:19:14:5:19 0/0:0:0:0:0:38:0%:70:1E0:41:38:26:12:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:49:2:2:0:35:5.71%:47:2.4638E-1:42:33:23:10:35 0/0:0:0:0:0:43:0%:82:1E0:39:43:29:14:44 0/0:0:0:0:0:24:0%:44:1E0:41:24:16:8:26 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:24 0/0:0:0:0:0:20:0%:36:1E0:39:20:14:6:20 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 1/1:40:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:26:0%:47:1E0:43:26:18:8:27 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:23 0/0:49:2:2:0:42:4.76%:57:2.4699E-1:43:40:25:15:43 0/1:43:12:7:5:26:46.15%:43:4.6796E-5:42:14:11:3:26 0/0:0:0:0:0:38:0%:70:1E0:40:38:29:9:38 0/0:0:0:0:0:27:0%:52:1E0:41:27:17:10:28 0/0:0:0:0:0:42:0%:77:1E0:39:42:27:15:42 0/0:0:0:0:0:16:0%:29:1E0:42:16:11:5:16 0/0:0:0:0:0:26:0%:47:1E0:48:26:16:10:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:35 0/0:0:0:0:0:38:0%:70:1E0:38:38:25:13:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:37 0/0:0:0:0:0:40:0%:74:1E0:38:40:25:15:40 0/0:0:0:0:0:44:0%:81:1E0:40:44:27:17:45 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:38 0/0:0:0:0:0:19:0%:37:1E0:39:19:11:8:19 0/0:0:0:0:0:30:0%:55:1E0:39:30:23:7:31 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:30 0/0:0:0:0:0:50:0%:92:1E0:40:50:37:13:53 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:27 0/0:0:0:0:0:23:0%:44:1E0:36:23:18:5:24 0/0:0:0:0:0:45:0%:85:1E0:39:45:29:16:45 0/0:52:3:2:1:29:10.34%:31:1.1842E-1:45:26:15:11:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:18:7:27 0/0:0:0:0:0:33:0%:63:1E0:37:33:26:7:34 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:34 0/0:37:1:0:1:20:5%:27:5E-1:38:19:12:7:21 0/1:45:8:2:6:15:53.33%:29:1.0995E-3:37:7:5:2:15 1/1:41:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:26:0%:47:1E0:42:26:20:6:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:29:10:40 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:15 0/0:0:0:0:0:21:0%:40:1E0:39:21:15:6:22 0/0:38:2:1:1:19:10.53%:21:2.4324E-1:41:17:9:8:19 0/1:41:6:4:2:13:46.15%:21:7.4534E-3:46:7:5:2:13 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/1:46:10:3:7:14:71.43%:41:7.6278E-5:60:4:2:2:14 0/0:38:1:0:1:42:2.38%:66:5E-1:39:41:25:16:45 0/0:0:0:0:0:19:0%:37:1E0:40:19:14:5:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:21:3:26 0/0:37:2:1:1:29:6.9%:37:2.4561E-1:43:27:19:8:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:21:6:28 0/0:0:0:0:0:17:0%:33:1E0:40:17:13:4:18 0/0:0:0:0:0:44:0%:81:1E0:37:44:39:5:45 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:39:0%:74:1E0:40:39:21:18:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:29:0%:55:1E0:36:29:20:9:29 0/0:38:1:0:1:30:3.33%:44:5E-1:39:29:20:9:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:11:0%:22:1E0:44:11:6:5:11 0/0:46:5:3:2:28:17.86%:19:2.5729E-2:42:23:10:13:28 0/0:38:1:0:1:22:4.55%:31:5E-1:42:21:12:9:22 0/0:0:0:0:0:23:0%:44:1E0:43:23:15:8:23 0/0:60:1:0:1:14:7.14%:17:5E-1:48:13:10:3:14 0/1:38:8:2:6:23:34.78%:27:1.8791E-3:38:15:11:4:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:21 1/1:42:14:8:6:15:93.33%:69:1.0315E-7:37:1:1:0:16 0/0:45:6:3:3:20:30%:7:1.0098E-2:39:14:8:6:20 0/0:0:0:0:0:21:0%:40:1E0:43:21:15:6:23 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:28 0/0:0:0:0:0:35:0%:67:1E0:38:35:24:11:35 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:23 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:33 0/0:0:0:0:0:34:0%:62:1E0:39:34:21:13:36 0/0:0:0:0:0:30:0%:55:1E0:37:30:19:11:30 0/0:33:2:1:1:11:18.18%:10:2.381E-1:39:9:7:2:11 0/0:0:0:0:0:22:0%:40:1E0:41:22:17:5:23 0/0:0:0:0:0:21:0%:40:1E0:38:21:17:4:22 0/0:0:0:0:0:36:0%:66:1E0:41:36:25:11:37 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:27:0%:52:1E0:37:27:21:6:28 0/0:0:0:0:0:28:0%:51:1E0:38:28:21:7:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:18:5:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:28 0/0:0:0:0:0:16:0%:29:1E0:39:16:13:3:17 0/0:0:0:0:0:29:0%:55:1E0:36:29:16:13:30 0/0:0:0:0:0:32:0%:59:1E0:37:32:21:11:32 0/0:0:0:0:0:28:0%:51:1E0:38:28:16:12:31 0/0:35:2:2:0:20:10%:21:2.4359E-1:43:18:10:8:22 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:31 0/0:0:0:0:0:37:0%:70:1E0:38:37:27:10:37 0/0:0:0:0:0:51:0%:97:1E0:37:51:39:12:52 0/0:0:0:0:0:23:0%:44:1E0:40:23:18:5:24 0/0:0:0:0:0:24:0%:44:1E0:43:24:17:7:26 0/0:0:0:0:0:43:0%:82:1E0:37:43:27:16:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:23:13:36 0/0:0:0:0:0:33:0%:63:1E0:37:33:23:10:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:37 0/0:0:0:0:0:28:0%:51:1E0:39:28:22:6:31 0/0:0:0:0:0:35:0%:67:1E0:35:35:20:15:37 0/0:0:0:0:0:37:0%:70:1E0:35:37:28:9:38 0/0:0:0:0:0:24:0%:44:1E0:36:24:15:9:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:22:10:35 0/0:0:0:0:0:29:0%:55:1E0:38:29:20:9:31 0/0:0:0:0:0:45:0%:85:1E0:39:45:27:18:47 0/0:0:0:0:0:24:0%:44:1E0:40:24:17:7:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:22:11:35 0/0:0:0:0:0:34:0%:62:1E0:38:34:21:13:36 0/0:0:0:0:0:31:0%:59:1E0:38:31:21:10:31 0/0:0:0:0:0:43:0%:82:1E0:37:43:29:14:45 0/0:0:0:0:0:32:0%:59:1E0:37:32:19:13:32 0/0:0:0:0:0:31:0%:59:1E0:39:31:23:8:32 0/0:0:0:0:0:27:0%:52:1E0:36:27:17:10:27 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:27:8:35 0/0:0:0:0:0:31:0%:59:1E0:40:31:22:9:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:35 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:55:0%:99:1E0:39:55:41:14:57 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:39 MTB_anc 3894593 . G A . PASS AC=13;AF=0.044;AN=294;ANN=A|synonymous_variant|LOW|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.168G>A|p.Gly56Gly|168/1182|168/1182|56/393||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3894593G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3894593G>A||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:43:0%:82:1E0:39:43:27:16:43 0/0:0:0:0:0:14:0%:25:1E0:50:14:11:3:15 0/0:38:1:1:0:48:2.08%:76:5E-1:42:47:28:19:49 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:20 0/0:41:4:3:1:20:20%:13:5.3015E-2:42:16:9:7:21 0/0:0:0:0:0:25:0%:48:1E0:37:25:17:8:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:37:2:2:0:16:12.5%:15:2.4194E-1:50:14:6:8:16 0/0:0:0:0:0:27:0%:52:1E0:42:27:19:8:27 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:12 0/0:0:0:0:0:36:0%:66:1E0:42:36:24:12:36 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:23 0/0:0:0:0:0:29:0%:55:1E0:38:29:22:7:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:24:1:0:1:17:5.88%:21:5E-1:38:15:9:6:17 0/0:0:0:0:0:25:0%:48:1E0:43:25:19:6:26 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:18:0%:32:1E0:43:18:13:5:18 0/0:0:0:0:0:37:0%:70:1E0:41:37:26:11:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:34:0%:62:1E0:42:34:24:10:34 0/0:0:0:0:0:43:0%:82:1E0:40:43:29:14:44 0/0:73:1:0:1:25:4%:38:5E-1:40:24:18:6:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:17:6:23 0/0:0:0:0:0:31:0%:59:1E0:44:31:19:12:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:26 1/1:41:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:38:1:1:0:29:3.45%:45:5E-1:40:28:14:14:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:28 0/0:0:0:0:0:21:0%:40:1E0:38:21:15:6:22 0/0:37:1:1:0:42:2.38%:66:5E-1:42:41:26:15:43 0/1:41:12:7:5:25:48%:43:4.2836E-5:41:13:10:3:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:29:8:38 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:28 0/0:0:0:0:0:42:0%:77:1E0:41:42:27:15:42 0/0:0:0:0:0:14:0%:25:1E0:43:14:10:4:14 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:35 0/0:0:0:0:0:38:0%:70:1E0:38:38:25:13:39 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:22:15:37 0/0:0:0:0:0:40:0%:74:1E0:38:40:25:15:40 0/0:0:0:0:0:43:0%:82:1E0:41:43:27:16:43 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:23 0/0:0:0:0:0:40:0%:74:1E0:39:40:24:16:41 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:29:0%:55:1E0:39:29:23:6:30 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:31 0/0:36:1:1:0:52:1.92%:83:5E-1:40:51:38:13:53 0/0:0:0:0:0:27:0%:52:1E0:42:27:16:11:27 0/0:0:0:0:0:24:0%:44:1E0:37:24:19:5:24 0/0:0:0:0:0:42:0%:77:1E0:40:42:28:14:42 0/0:48:3:2:1:29:10.34%:31:1.1842E-1:45:26:15:11:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:19:8:28 0/0:0:0:0:0:34:0%:62:1E0:37:34:26:8:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:34 0/0:37:1:0:1:19:5.26%:28:5E-1:39:18:13:5:19 0/1:42:8:2:6:15:53.33%:29:1.0995E-3:40:7:5:2:15 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:27:0%:52:1E0:42:27:20:7:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:29:10:41 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:22:0%:40:1E0:41:22:16:6:22 0/0:36:2:1:1:20:10%:21:2.4359E-1:40:18:10:8:20 0/1:40:6:4:2:13:46.15%:21:7.4534E-3:44:7:5:2:13 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/1:42:10:3:7:14:71.43%:41:7.6278E-5:60:4:2:2:14 0/0:39:1:0:1:44:2.27%:69:5E-1:38:43:26:17:45 0/0:0:0:0:0:19:0%:37:1E0:41:19:14:5:19 0/0:0:0:0:0:26:0%:47:1E0:39:26:23:3:26 0/0:38:2:1:1:29:6.9%:37:2.4561E-1:42:27:19:8:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:22:6:28 0/0:0:0:0:0:18:0%:32:1E0:41:18:14:4:18 0/0:0:0:0:0:44:0%:81:1E0:38:44:39:5:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:29 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:29:0%:55:1E0:36:29:20:9:29 0/0:34:1:0:1:31:3.23%:48:5E-1:39:30:20:10:31 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:28 0/0:0:0:0:0:11:0%:22:1E0:45:11:6:5:11 0/0:47:5:3:2:28:17.86%:19:2.5729E-2:42:23:10:13:28 0/0:39:1:0:1:22:4.55%:31:5E-1:42:21:12:9:22 0/0:52:1:0:1:22:4.55%:31:5E-1:42:21:15:6:22 0/0:60:1:0:1:14:7.14%:17:5E-1:49:13:10:3:14 0/1:40:8:2:6:23:34.78%:27:1.8791E-3:38:15:12:3:23 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:21 0/1:41:13:8:5:15:86.67%:60:8.7675E-7:36:2:1:1:16 0/1:44:6:3:3:19:31.58%:20:9.828E-3:40:13:7:6:20 0/0:0:0:0:0:22:0%:40:1E0:42:22:16:6:22 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:36 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:39:34:23:11:34 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:22 0/0:0:0:0:0:33:0%:63:1E0:37:33:22:11:33 0/0:0:0:0:0:36:0%:66:1E0:38:36:22:14:36 0/0:0:0:0:0:32:0%:59:1E0:38:32:21:11:32 0/0:38:1:0:1:10:10%:11:5E-1:39:9:7:2:11 0/0:0:0:0:0:22:0%:40:1E0:40:22:18:4:23 0/0:0:0:0:0:22:0%:40:1E0:40:22:18:4:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:24:11:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:29 0/0:0:0:0:0:28:0%:51:1E0:37:28:22:6:29 0/0:0:0:0:0:30:0%:55:1E0:39:30:23:7:30 0/0:0:0:0:0:21:0%:40:1E0:40:21:17:4:21 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:28 0/0:0:0:0:0:16:0%:29:1E0:39:16:13:3:16 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:29 0/0:0:0:0:0:32:0%:59:1E0:38:32:22:10:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:30 0/0:35:2:2:0:22:9.09%:24:2.4419E-1:41:20:12:8:22 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:27:10:37 0/0:0:0:0:0:51:0%:97:1E0:38:51:39:12:51 0/0:0:0:0:0:24:0%:44:1E0:39:24:19:5:24 0/0:0:0:0:0:26:0%:47:1E0:43:26:20:6:26 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:42 0/0:0:0:0:0:35:0%:67:1E0:39:35:22:13:35 0/0:0:0:0:0:36:0%:66:1E0:38:36:26:10:37 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:37 0/0:0:0:0:0:30:0%:55:1E0:38:30:22:8:31 0/0:0:0:0:0:33:0%:63:1E0:36:33:19:14:36 0/0:0:0:0:0:36:0%:66:1E0:37:36:27:9:38 0/0:0:0:0:0:25:0%:48:1E0:35:25:18:7:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:26:9:35 0/0:0:0:0:0:30:0%:55:1E0:38:30:21:9:31 0/0:0:0:0:0:45:0%:85:1E0:39:45:29:16:47 0/0:0:0:0:0:24:0%:44:1E0:40:24:17:7:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:23:10:34 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:33 0/0:0:0:0:0:31:0%:59:1E0:38:31:21:10:31 0/0:0:0:0:0:43:0%:82:1E0:37:43:30:13:43 0/0:0:0:0:0:32:0%:59:1E0:38:32:19:13:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:21:8:30 0/0:0:0:0:0:25:0%:48:1E0:36:25:16:9:26 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:28:9:37 0/0:0:0:0:0:29:0%:55:1E0:40:29:21:8:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:36 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 0/0:0:0:0:0:52:0%:96:1E0:39:52:41:11:55 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:38 MTB_anc 3894625 . C T . PASS AC=7;AF=0.024;AN=288;ANN=T|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.200C>T|p.Ala67Val|200/1182|200/1182|67/393||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3894625C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3894625C>T||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:29:0%:55:1E0:36:29:17:12:33 0/0:0:0:0:0:12:0%:21:1E0:44:12:10:2:14 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:40 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:13 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:20 0/0:0:0:0:0:12:0%:21:1E0:36:12:10:2:14 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:13 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:15 0/0:34:1:0:1:22:4.55%:31:5E-1:39:21:12:9:23 0/0:38:1:1:0:17:5.88%:24:5E-1:47:16:5:11:18 0/0:0:0:0:0:18:0%:32:1E0:40:18:12:6:19 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:32 0/0:0:0:0:0:8:0%:14:1E0:41:8:4:4:11 0/0:0:0:0:0:34:0%:62:1E0:38:34:23:11:36 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:22 0/0:0:0:0:0:19:0%:37:1E0:36:19:13:6:22 0/0:0:0:0:0:16:0%:29:1E0:42:16:8:8:17 0/0:0:0:0:0:10:0%:17:1E0:35:10:8:2:14 0/0:25:1:1:0:18:5.56%:24:5E-1:38:17:12:5:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:22 0/0:0:0:0:0:20:0%:36:1E0:40:20:14:6:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:24 0/0:0:0:0:0:31:0%:59:1E0:37:31:20:11:32 0/0:0:0:0:0:15:0%:29:1E0:39:15:9:6:19 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:13 0/0:0:0:0:0:17:0%:33:1E0:38:17:12:5:18 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:27 0/0:0:0:0:0:26:0%:47:1E0:40:26:17:9:29 0/0:38:1:0:1:26:3.85%:38:5E-1:38:25:12:13:28 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:27:0%:52:1E0:35:27:16:11:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:22:0%:40:1E0:39:22:17:5:24 0/0:0:0:0:0:19:0%:37:1E0:35:19:11:8:19 0/0:38:2:2:0:42:4.76%:57:2.4699E-1:39:40:25:15:44 0/1:36:11:6:5:22:50%:40:9.1981E-5:34:11:9:2:22 0/0:0:0:0:0:22:0%:40:1E0:39:22:15:7:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:25 0/0:0:0:0:0:31:0%:59:1E0:38:31:19:12:32 0/0:0:0:0:0:12:0%:21:1E0:43:12:7:5:15 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:29 0/0:0:0:0:0:28:0%:51:1E0:36:28:18:10:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:33:0%:63:1E0:37:33:19:14:36 0/0:0:0:0:0:28:0%:51:1E0:36:28:17:11:33 0/0:38:1:0:1:31:3.23%:48:5E-1:37:30:18:12:38 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:18 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:35 0/0:0:0:0:0:12:0%:21:1E0:41:12:7:5:13 0/0:0:0:0:0:18:0%:32:1E0:37:18:13:5:19 0/0:0:0:0:0:16:0%:29:1E0:35:16:8:8:20 0/0:0:0:0:0:46:0%:85:1E0:37:46:35:11:51 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:26 0/0:0:0:0:0:12:0%:21:1E0:35:12:9:3:15 0/0:0:0:0:0:34:0%:62:1E0:38:34:23:11:35 0/0:37:1:1:0:28:3.57%:41:5E-1:42:27:16:11:28 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:25 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:23 0/0:0:0:0:0:23:0%:44:1E0:37:23:13:10:27 0/0:38:1:0:1:17:5.88%:24:5E-1:38:16:9:7:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:26 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:32 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:14 0/0:37:1:1:0:17:5.88%:24:5E-1:39:16:8:8:21 0/0:48:2:0:2:18:11.11%:18:2.4286E-1:37:16:10:6:20 0/0:37:3:2:1:9:33.33%:4:1.0294E-1:37:6:4:2:9 0/0:0:0:0:0:16:0%:29:1E0:37:16:6:10:19 0/1:37:9:2:7:14:64.29%:35:2.8986E-4:42:5:2:3:15 0/0:33:1:0:1:25:4%:38:5E-1:37:24:11:13:34 0/0:0:0:0:0:10:0%:17:1E0:35:10:6:4:12 0/0:0:0:0:0:17:0%:33:1E0:35:17:15:2:22 0/0:38:1:0:1:22:4.55%:31:5E-1:36:21:14:7:27 0/0:38:1:1:0:18:5.56%:24:5E-1:39:17:10:7:20 0/0:0:0:0:0:12:0%:21:1E0:37:12:10:2:12 0/0:0:0:0:0:27:0%:52:1E0:38:27:23:4:34 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:24 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:22 0/0:0:0:0:0:25:0%:48:1E0:36:25:16:9:30 0/0:32:1:1:0:18:5.56%:24:5E-1:40:17:11:6:21 0/0:0:0:0:0:9:0%:18:1E0:38:9:5:4:11 0/0:36:5:3:2:23:21.74%:14:2.4548E-2:40:18:8:10:25 0/0:38:1:0:1:20:5%:27:5E-1:37:19:11:8:20 0/0:0:0:0:0:18:0%:32:1E0:39:18:12:6:20 0/0:38:1:0:1:11:9.09%:14:5E-1:45:10:8:2:13 0/1:37:6:1:5:16:37.5%:20:8.837E-3:37:10:7:3:18 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:19 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 0/0:37:3:2:1:15:20%:11:1.1207E-1:36:12:9:3:15 0/0:0:0:0:0:17:0%:33:1E0:35:17:10:7:20 0/0:0:0:0:0:28:0%:51:1E0:37:28:16:12:32 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:19 0/0:0:0:0:0:27:0%:52:1E0:36:27:15:12:29 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:19 0/0:0:0:0:0:29:0%:55:1E0:37:29:19:10:33 0/0:0:0:0:0:26:0%:47:1E0:36:26:14:12:28 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:21 0/0:38:1:0:1:7:14.29%:8:5E-1:34:6:3:3:9 0/0:0:0:0:0:15:0%:29:1E0:39:15:12:3:17 0/0:0:0:0:0:17:0%:33:1E0:37:17:13:4:20 0/0:0:0:0:0:26:0%:47:1E0:36:26:17:9:28 0/0:60:1:0:1:21:4.76%:31:5E-1:39:20:13:7:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:24 0/0:0:0:0:0:25:0%:48:1E0:36:25:18:7:28 0/0:0:0:0:0:19:0%:37:1E0:38:19:15:4:21 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:23 0/0:0:0:0:0:11:0%:22:1E0:36:11:8:3:13 0/0:0:0:0:0:20:0%:36:1E0:34:20:9:11:22 0/0:0:0:0:0:21:0%:40:1E0:37:21:13:8:25 0/0:0:0:0:0:17:0%:33:1E0:35:17:7:10:21 0/0:0:0:0:0:11:0%:22:1E0:36:11:6:5:13 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:22 0/0:0:0:0:0:18:0%:32:1E0:37:18:12:6:23 0/0:0:0:0:0:38:0%:70:1E0:37:38:27:11:42 0/0:0:0:0:0:15:0%:29:1E0:40:15:11:4:18 0/0:0:0:0:0:21:0%:40:1E0:36:21:15:6:24 0/0:0:0:0:0:29:0%:55:1E0:35:29:16:13:35 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:28 0/0:0:0:0:0:21:0%:40:1E0:34:21:14:7:24 0/0:0:0:0:0:30:0%:55:1E0:36:30:11:19:31 0/0:0:0:0:0:16:0%:29:1E0:35:16:11:5:19 0/0:38:1:0:1:24:4.17%:34:5E-1:35:23:11:12:28 0/0:0:0:0:0:20:0%:36:1E0:35:20:13:7:28 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:15 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:23 0/0:0:0:0:0:24:0%:44:1E0:37:24:13:11:29 0/0:0:0:0:0:11:0%:22:1E0:38:11:7:4:13 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:27 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:24 0/0:0:0:0:0:16:0%:29:1E0:38:16:11:5:20 0/0:0:0:0:0:27:0%:52:1E0:36:27:16:11:30 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:21 0/0:0:0:0:0:24:0%:44:1E0:38:24:17:7:26 0/0:38:1:0:1:20:5%:27:5E-1:35:19:13:6:20 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:18:8:30 0/0:0:0:0:0:17:0%:33:1E0:38:17:15:2:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:11:11:24 0/0:0:0:0:0:25:0%:48:1E0:38:25:18:7:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:32:0%:59:1E0:36:32:23:9:40 0/0:0:0:0:0:17:0%:33:1E0:41:17:11:6:21 MTB_anc 3894678 . C G . PASS AC=2;AF=7.194e-03;AN=278;ANN=G|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.253C>G|p.Gln85Glu|253/1182|253/1182|85/393||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3894678C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3894678C>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:15:0%:29:1E0:38:15:10:5:16 0/0:0:0:0:0:29:0%:55:1E0:38:29:15:14:31 0/0:0:0:0:0:8:0%:14:1E0:38:8:5:3:9 0/0:0:0:0:0:12:0%:21:1E0:35:12:4:8:14 0/0:0:0:0:0:12:0%:21:1E0:40:12:9:3:12 0/0:39:1:1:0:10:10%:11:5E-1:36:9:4:5:10 0/0:0:0:0:0:10:0%:17:1E0:41:10:7:3:11 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:15 0/0:39:1:1:0:15:6.67%:21:5E-1:44:14:4:10:15 0/0:0:0:0:0:13:0%:25:1E0:40:13:8:5:13 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:22 0/0:0:0:0:0:13:0%:25:1E0:35:13:8:5:13 0/0:33:1:1:0:28:3.57%:41:5E-1:39:27:13:14:29 0/0:0:0:0:0:15:0%:29:1E0:37:15:13:2:19 0/0:0:0:0:0:19:0%:37:1E0:38:19:10:9:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:13 0/0:37:1:0:1:9:11.11%:11:5E-1:35:8:5:3:10 0/0:0:0:0:0:13:0%:25:1E0:37:13:9:4:16 0/0:0:0:0:0:15:0%:29:1E0:38:15:5:10:16 0/0:0:0:0:0:23:0%:44:1E0:39:23:17:6:24 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:13 0/0:0:0:0:0:27:0%:52:1E0:36:27:14:13:30 0/0:0:0:0:0:13:0%:25:1E0:39:13:7:6:14 0/0:38:1:0:1:16:6.25%:21:5E-1:36:15:3:12:16 0/0:0:0:0:0:13:0%:25:1E0:44:13:6:7:13 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:24 0/0:39:1:1:0:23:4.35%:34:5E-1:39:22:10:12:24 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:22 0/0:0:0:0:0:25:0%:48:1E0:36:25:13:12:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:18 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:38:1:1:0:30:3.33%:44:5E-1:37:29:14:15:32 0/0:37:3:2:1:12:25%:6:1.087E-1:40:9:7:2:12 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:15 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:18 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:13 0/0:0:0:0:0:11:0%:22:1E0:43:11:6:5:14 0/0:0:0:0:0:27:0%:52:1E0:37:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:21 0/0:0:0:0:0:16:0%:29:1E0:38:16:9:7:17 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:29 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:26 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:26 0/0:0:0:0:0:12:0%:21:1E0:40:12:2:10:12 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:27 0/0:0:0:0:0:11:0%:22:1E0:41:11:6:5:11 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:15 0/0:0:0:0:0:15:0%:29:1E0:36:15:8:7:16 0/0:0:0:0:0:29:0%:55:1E0:36:29:18:11:30 0/0:0:0:0:0:17:0%:33:1E0:38:17:9:8:18 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:9 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:22 0/0:39:1:1:0:23:4.35%:34:5E-1:38:22:13:9:24 0/0:0:0:0:0:14:0%:25:1E0:40:14:8:6:15 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:21 0/0:0:0:0:0:16:0%:29:1E0:36:16:10:6:17 0/0:39:1:0:1:12:8.33%:14:5E-1:41:11:5:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:17 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:0:0:0:0:31:0%:59:1E0:36:31:13:18:32 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:11 0/0:0:0:0:0:14:0%:25:1E0:37:14:10:4:15 0/0:0:0:0:0:20:0%:36:1E0:36:20:11:9:21 0/0:39:1:1:0:20:5%:27:5E-1:39:19:9:10:20 0/0:0:0:0:0:9:0%:18:1E0:38:9:5:4:10 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:19 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:22 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:12:0%:21:1E0:39:12:7:5:12 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:18 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:20 0/0:0:0:0:0:8:0%:14:1E0:36:8:5:3:8 0/0:39:2:2:0:18:11.11%:18:2.4286E-1:38:16:8:8:19 0/0:0:0:0:0:8:0%:14:1E0:42:8:5:3:9 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:18 0/0:37:1:0:1:12:8.33%:14:5E-1:38:11:8:3:12 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:13 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:39:1:1:0:9:11.11%:11:5E-1:37:8:6:2:9 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:18 0/0:0:0:0:0:19:0%:37:1E0:36:19:12:7:22 0/0:0:0:0:0:19:0%:37:1E0:36:19:8:11:19 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:24 0/0:0:0:0:0:16:0%:29:1E0:39:16:6:10:16 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:25 0/0:0:0:0:0:13:0%:25:1E0:37:13:7:6:14 0/0:0:0:0:0:14:0%:25:1E0:35:14:8:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:11:0%:22:1E0:39:11:7:4:12 0/0:0:0:0:0:13:0%:25:1E0:40:13:9:4:14 0/0:0:0:0:0:19:0%:37:1E0:36:19:6:13:20 0/0:34:1:1:0:22:4.55%:31:5E-1:36:21:12:9:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:15 0/0:0:0:0:0:21:0%:40:1E0:38:21:15:6:22 0/0:0:0:0:0:17:0%:33:1E0:36:17:10:7:19 0/0:0:0:0:0:19:0%:37:1E0:36:19:10:9:20 0/0:0:0:0:0:17:0%:33:1E0:37:17:10:7:20 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:16 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:9 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:8 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:19 0/0:0:0:0:0:24:0%:44:1E0:37:24:18:6:25 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:18 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:15 0/0:0:0:0:0:20:0%:36:1E0:36:20:12:8:20 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:19 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 0/0:0:0:0:0:23:0%:44:1E0:37:23:10:13:24 0/0:0:0:0:0:8:0%:14:1E0:37:8:4:4:9 0/0:33:1:0:1:17:5.88%:24:5E-1:37:16:7:9:17 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:14 0/0:0:0:0:0:7:0%:14:1E0:34:7:3:4:8 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:17 0/0:0:0:0:0:15:0%:29:1E0:36:15:9:6:15 0/0:0:0:0:0:23:0%:44:1E0:36:23:15:8:24 0/0:0:0:0:0:11:0%:22:1E0:39:11:7:4:12 0/0:0:0:0:0:13:0%:25:1E0:37:13:6:7:14 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:21 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:15 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:20 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:13 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:17 0/0:39:1:0:1:10:10%:11:5E-1:38:9:7:2:10 0/0:0:0:0:0:30:0%:55:1E0:36:30:13:17:30 0/0:0:0:0:0:19:0%:37:1E0:36:19:14:5:19 0/0:0:0:0:0:15:0%:29:1E0:37:15:11:4:15 0/0:0:0:0:0:20:0%:36:1E0:37:20:9:11:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:19:5:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:21 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:16 MTB_anc 3895055 . A G . PASS AC=285;AF=0.997;AN=286;ANN=G|synonymous_variant|LOW|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.630A>G|p.Gln210Gln|630/1182|630/1182|210/393||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895055A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895055A>G||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:51:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:39:18:21:40:97.5%:99:3.6742E-23:0:0:0:0:42 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:48:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:51:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:44:11:33:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:51:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:54:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 ./. 1/1:44:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:39:8:2:6:9:88.89%:36:2.0568E-4:34:1:1:0:9 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:60:22:38:60:100%:99:1.035E-35:0:0:0:0:60 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:32:7:25:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:22:11:11:23:95.65%:99:4.7526E-13:0:0:0:0:24 1/1:40:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:43:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 3895067 . A C . PASS AC=286;AF=1.00;AN=286;ANN=C|synonymous_variant|LOW|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.642A>C|p.Pro214Pro|642/1182|642/1182|214/393||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895067A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895067A>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:16:7:9:17:94.12%:87:1.6637E-9:0:0:0:0:18 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:52:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:21:10:11:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:32:14:18:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:46:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:48:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:43:21:22:44:97.73%:99:1.7144E-24:38:1:0:1:44 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:12:25:38:97.37%:99:5.6582E-21:60:1:0:1:38 1/1:55:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:38:9:29:39:97.44%:99:1.4697E-21:38:1:0:1:39 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:55:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 ./. 1/1:46:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:49:22:27:50:98%:99:5.0549E-28:38:1:0:1:52 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:42:35:11:24:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:40:29:14:15:30:96.67%:99:2.6212E-16:60:1:0:1:31 MTB_anc 3895068 . G A . PASS AC=284;AF=1.00;AN=284;ANN=A|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.643G>A|p.Ala215Thr|643/1182|643/1182|215/393||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895068G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895068G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:52:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:20:11:9:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:47 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:48:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:52:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:32:14:18:33:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:48:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:53:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:37:9:28:38:97.37%:99:5.6582E-21:38:1:0:1:38 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:55:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 ./. 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:42:35:11:24:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 3895077 . G A . PASS AC=282;AF=1.00;AN=282;ANN=A|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.652G>A|p.Val218Ile|652/1182|652/1182|218/393||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895077G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895077G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:33:18:15:34:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:48:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:52:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:22:9:13:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:49:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:16:11:5:17:94.12%:87:1.6637E-9:0:0:0:0:18 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:36:22:14:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:53:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:35:9:26:36:97.22%:99:8.3613E-20:38:1:0:1:37 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:15:4:11:16:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:55:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:55:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 ./. 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:29:15:14:30:96.67%:99:2.6212E-16:35:1:1:0:31 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:23:19:4:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:35:20:15:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:12:8:4:12:100%:64:3.698E-7:0:0:0:0:15 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:43:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 3895078 . T C . PASS AC=284;AF=1.00;AN=284;ANN=C|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.653T>C|p.Val218Ala|653/1182|653/1182|218/393||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895078T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895078T>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:50:32:18:14:33:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:51:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:21:9:12:22:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:49:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:17:11:6:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:35:21:14:36:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:53:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:43:36:9:27:37:97.3%:99:2.1762E-20:38:1:0:1:37 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:15:4:11:16:100%:81:6.4467E-9:0:0:0:0:16 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:56:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:18:14:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:57:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 ./. 1/1:46:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:20:15:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 3895080 . G A . PASS AC=282;AF=1.00;AN=282;ANN=A|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.655G>A|p.Val219Ile|655/1182|655/1182|219/393||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895080G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895080G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:33:18:15:34:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:45 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:52:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:22:9:13:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:48:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:17:11:6:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:36:22:14:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:55:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:36:9:27:37:97.3%:99:2.1762E-20:39:1:0:1:37 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:15:4:11:16:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:60:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:57:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 ./. 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:25:6:19:26:96.15%:99:5.4444E-14:32:1:1:0:28 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:20:15:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 3895081 . T C . PASS AC=284;AF=1.00;AN=284;ANN=C|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.656T>C|p.Val219Ala|656/1182|656/1182|219/393||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895081T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895081T>C||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:33:18:15:34:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:52:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:22:9:13:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:48:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:17:11:6:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:36:22:14:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:37:11:26:38:97.37%:99:5.6582E-21:39:1:1:0:38 1/1:54:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:43:36:9:27:37:97.3%:99:2.1762E-20:39:1:0:1:37 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:15:4:11:16:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:60:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:57:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 ./. 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:49:18:31:49:100%:99:3.925E-29:0:0:0:0:51 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:20:15:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 3895082 . A G . PASS AC=284;AF=1.00;AN=284;ANN=G|synonymous_variant|LOW|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.657A>G|p.Val219Val|657/1182|657/1182|219/393||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895082A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895082A>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:33:18:15:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:20:10:10:21:95.24%:99:4.0873E-11:60:1:0:1:21 1/1:48:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:52:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:22:9:13:23:95.65%:99:2.9149E-12:38:1:0:1:23 1/1:43:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:48:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:17:8:9:18:94.44%:93:4.2852E-10:0:0:0:0:19 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:17:11:6:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:36:22:14:37:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:28:20:8:29:96.55%:99:9.9776E-16:51:1:0:1:29 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:54:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:51:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:36:9:27:37:97.3%:99:2.1762E-20:39:1:0:1:37 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:15:4:11:16:93.75%:75:2.8282E-8:60:1:1:0:16 1/1:49:25:9:16:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:60:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:57:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 ./. 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:20:15:36:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 3895200 . A G . PASS AC=2;AF=6.803e-03;AN=294;ANN=G|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.775A>G|p.Thr259Ala|775/1182|775/1182|259/393||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895200A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895200A>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:50 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:16 0/0:0:0:0:0:51:0%:97:1E0:44:51:28:23:52 0/0:0:0:0:0:27:0%:52:1E0:47:27:10:17:27 0/0:0:0:0:0:15:0%:29:1E0:49:15:7:8:16 0/0:0:0:0:0:20:0%:36:1E0:44:20:4:16:22 0/0:0:0:0:0:16:0%:29:1E0:50:16:5:11:16 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:50:34:24:10:36 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:45:0%:85:1E0:42:45:16:29:45 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:23:8:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:22:12:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:8:21:29 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:26 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:16 0/0:0:0:0:0:48:0%:89:1E0:45:48:25:23:50 0/0:0:0:0:0:8:0%:14:1E0:46:8:4:4:8 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:30 0/0:38:1:1:0:25:4%:38:5E-1:43:24:11:13:25 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:25 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:28 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:60:1:0:1:37:2.7%:59:5E-1:46:36:22:14:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:2:2:0:38:5.26%:50:2.4667E-1:45:36:19:17:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:41 0/0:0:0:0:0:43:0%:82:1E0:48:43:20:23:44 0/0:38:2:2:0:13:15.38%:13:2.4E-1:45:11:8:3:13 0/0:0:0:0:0:58:0%:99:1E0:44:58:25:33:58 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:60:1:0:1:34:2.94%:51:5E-1:42:33:21:12:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:47:0%:89:1E0:44:47:21:26:47 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:47 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:11:0%:22:1E0:49:11:6:5:11 0/0:0:0:0:0:52:0%:96:1E0:44:52:24:28:52 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:20 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:27 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:42 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:47 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:60:1:0:1:53:1.89%:88:5E-1:44:52:29:23:53 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:37 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:35 0/0:0:0:0:0:41:0%:78:1E0:46:41:20:21:41 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:34 0/0:33:1:1:0:27:3.7%:41:5E-1:45:26:17:9:27 0/0:0:0:0:0:8:0%:14:1E0:42:8:5:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:43:0%:82:1E0:46:43:26:17:43 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:37 0/0:0:0:0:0:17:0%:33:1E0:46:17:8:9:17 0/0:0:0:0:0:28:0%:51:1E0:50:28:12:16:28 0/0:0:0:0:0:20:0%:36:1E0:49:20:13:7:21 0/0:0:0:0:0:10:0%:17:1E0:53:10:6:4:10 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:38:1:1:0:8:12.5%:8:5E-1:44:7:7:0:8 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:50 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:22:0%:40:1E0:47:22:6:16:22 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:25 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:38 0/0:36:3:2:1:12:25%:6:1.087E-1:43:9:4:5:12 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:60:1:0:1:23:4.35%:34:5E-1:45:22:11:11:23 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 0/0:0:0:0:0:28:0%:51:1E0:47:28:9:19:28 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:16 0/0:38:1:1:0:31:3.23%:48:5E-1:40:30:15:15:33 0/0:0:0:0:0:15:0%:29:1E0:42:15:10:5:15 0/0:34:1:0:1:7:14.29%:8:5E-1:48:6:1:5:7 0/0:0:0:0:0:12:0%:21:1E0:41:12:5:7:12 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:37 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:15:0%:29:1E0:44:15:6:9:16 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:44 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:51:0%:97:1E0:42:51:29:22:51 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:25 0/0:0:0:0:0:52:0%:96:1E0:41:52:30:22:53 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:41 0/0:38:1:1:0:30:3.33%:44:5E-1:44:29:15:14:30 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:50 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:54 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:15:0%:29:1E0:38:15:7:8:15 0/0:0:0:0:0:47:0%:89:1E0:39:47:22:25:48 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 0/0:0:0:0:0:50:0%:92:1E0:41:50:22:28:51 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:43 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:48 0/0:0:0:0:0:37:0%:70:1E0:39:37:20:17:40 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:41:0%:78:1E0:40:41:21:20:43 0/0:0:0:0:0:43:0%:82:1E0:39:43:16:27:44 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:46 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:46:0%:85:1E0:39:46:20:26:50 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:18:0%:32:1E0:42:18:12:6:18 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 1/1:39:9:8:1:10:90%:42:5.9538E-5:34:1:1:0:10 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:47 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 MTB_anc 3895204 . A G . PASS AC=2;AF=6.803e-03;AN=294;ANN=G|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.779A>G|p.Asn260Ser|779/1182|779/1182|260/393||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895204A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895204A>G||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:1:1:0:50:2%:80:5E-1:44:49:23:26:50 0/0:0:0:0:0:14:0%:25:1E0:47:14:6:8:14 0/0:0:0:0:0:52:0%:96:1E0:45:52:29:23:52 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:16:0%:29:1E0:49:16:7:9:16 0/0:0:0:0:0:22:0%:40:1E0:43:22:6:16:23 0/0:0:0:0:0:16:0%:29:1E0:50:16:5:11:16 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:30 0/0:0:0:0:0:35:0%:67:1E0:50:35:25:10:36 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:19:0%:37:1E0:51:19:9:10:19 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:46 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:46:30:22:8:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:8:21:29 0/0:0:0:0:0:21:0%:40:1E0:41:21:9:12:22 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:17 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:51 0/0:0:0:0:0:8:0%:14:1E0:46:8:4:4:8 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:11:18:30 0/0:39:1:1:0:26:3.85%:38:5E-1:42:25:12:13:26 0/0:0:0:0:0:24:0%:44:1E0:49:24:6:18:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:43 0/0:60:1:0:1:35:2.86%:55:5E-1:47:34:21:13:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:38:1:1:0:37:2.7%:59:5E-1:46:36:19:17:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:41 0/0:0:0:0:0:44:0%:81:1E0:47:44:21:23:44 0/0:39:2:2:0:13:15.38%:13:2.4E-1:45:11:8:3:13 0/0:0:0:0:0:58:0%:99:1E0:45:58:25:33:58 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:32 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:60:1:0:1:36:2.78%:55:5E-1:42:35:23:12:36 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:46 0/0:0:0:0:0:48:0%:89:1E0:45:48:26:22:49 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:12:0%:21:1E0:50:12:6:6:12 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:51 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:25:16:41 0/0:0:0:0:0:50:0%:92:1E0:42:50:30:20:50 0/0:37:1:1:0:41:2.44%:66:5E-1:46:40:19:21:42 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:35 0/0:60:1:0:1:53:1.89%:88:5E-1:43:52:28:24:53 0/0:34:1:1:0:38:2.63%:58:5E-1:45:37:20:17:38 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:43 0/0:0:0:0:0:36:0%:66:1E0:48:36:14:22:36 0/0:33:1:1:0:27:3.7%:41:5E-1:45:26:17:9:27 0/0:0:0:0:0:8:0%:14:1E0:42:8:5:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:44:0%:81:1E0:45:44:27:17:44 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:20 0/0:0:0:0:0:10:0%:17:1E0:50:10:6:4:10 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:38:1:1:0:8:12.5%:8:5E-1:44:7:7:0:8 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:51 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:60:1:0:1:43:2.33%:70:5E-1:44:42:24:18:43 0/0:0:0:0:0:21:0%:40:1E0:48:21:6:15:21 0/0:0:0:0:0:42:0%:77:1E0:45:42:20:22:42 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:47 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:38:3:2:1:12:25%:6:1.087E-1:40:9:4:5:12 0/0:0:0:0:0:38:0%:70:1E0:42:38:14:24:39 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:39 0/0:57:1:0:1:22:4.55%:31:5E-1:48:21:10:11:22 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:25:0%:48:1E0:47:25:9:16:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:9:21:30 0/0:0:0:0:0:15:0%:29:1E0:46:15:5:10:16 0/0:39:1:1:0:34:2.94%:51:5E-1:40:33:16:17:34 0/0:0:0:0:0:14:0%:25:1E0:42:14:10:4:15 0/0:34:2:1:1:8:25%:5:2.3333E-1:49:6:1:5:8 0/0:0:0:0:0:12:0%:21:1E0:43:12:5:7:12 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:38:0%:70:1E0:42:38:25:13:39 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:28 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:17 0/0:0:0:0:0:43:0%:82:1E0:44:43:24:19:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:51:0%:97:1E0:43:51:29:22:52 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:52 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:39:1:1:0:28:3.57%:41:5E-1:45:27:15:12:28 0/0:0:0:0:0:24:0%:44:1E0:39:24:10:14:24 0/0:0:0:0:0:50:0%:92:1E0:43:50:22:28:50 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:55 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 0/0:0:0:0:0:16:0%:29:1E0:39:16:8:8:16 0/0:0:0:0:0:49:0%:93:1E0:39:49:22:27:50 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:39 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:49 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:42 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:47 0/0:0:0:0:0:41:0%:78:1E0:38:41:22:19:43 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:42:0%:77:1E0:40:42:15:27:43 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:46 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:30 0/0:0:0:0:0:44:0%:81:1E0:39:44:17:27:46 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:40 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:45 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:18:0%:32:1E0:42:18:13:5:18 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:34 1/1:39:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:47 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:50 MTB_anc 3895232 . A T . PASS AC=3;AF=0.010;AN=296;ANN=T|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.807A>T|p.Leu269Phe|807/1182|807/1182|269/393||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895232A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895232A>T||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:45:55:27:28:55 0/0:0:0:0:0:14:0%:25:1E0:49:14:5:9:14 0/0:0:0:0:0:49:0%:93:1E0:45:49:27:22:50 0/0:0:0:0:0:26:0%:47:1E0:48:26:8:18:26 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:16 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:22 0/0:0:0:0:0:15:0%:29:1E0:53:15:5:10:15 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:48:30:20:10:32 0/0:0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:33 0/0:0:0:0:0:20:0%:36:1E0:50:20:11:9:20 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:46 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:20:6:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:33 0/0:0:0:0:0:28:0%:51:1E0:46:28:8:20:29 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:15:0%:29:1E0:42:15:5:10:16 0/0:0:0:0:0:50:0%:92:1E0:46:50:27:23:51 0/0:0:0:0:0:7:0%:14:1E0:49:7:3:4:7 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:21 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:38 0/0:60:1:1:0:31:3.23%:48:5E-1:46:30:11:19:31 0/0:39:1:1:0:24:4.17%:34:5E-1:44:23:10:13:24 0/0:0:0:0:0:22:0%:40:1E0:49:22:5:17:22 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:45 0/0:60:1:0:1:37:2.7%:59:5E-1:46:36:21:15:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:37:1:1:0:7:14.29%:8:5E-1:39:6:3:3:8 0/0:0:0:0:0:36:0%:66:1E0:47:36:21:15:36 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:43 0/0:38:1:0:1:45:2.22%:73:5E-1:46:44:21:23:46 0/0:38:5:4:1:15:33.33%:6:2.1073E-2:51:10:7:3:15 0/0:0:0:0:0:59:0%:99:1E0:45:59:28:31:59 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:39 0/0:38:1:1:0:37:2.7%:59:5E-1:44:36:20:16:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:49:32:19:13:32 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:50 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:10:0%:17:1E0:49:10:5:5:10 0/0:34:1:1:0:47:2.13%:77:5E-1:45:46:22:24:49 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:50 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:38 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:60:1:0:1:51:1.96%:84:5E-1:45:50:27:23:51 0/0:39:2:1:1:41:4.88%:57:2.4691E-1:43:39:20:19:41 0/0:0:0:0:0:35:0%:67:1E0:49:35:18:17:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:41 0/0:0:0:0:0:39:0%:74:1E0:46:39:16:23:39 0/0:39:1:1:0:25:4%:38:5E-1:46:24:15:9:25 0/0:38:2:0:2:13:15.38%:13:2.4E-1:45:11:8:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:42:0%:77:1E0:47:42:24:18:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:22:0%:40:1E0:49:22:9:13:22 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:21:0%:40:1E0:47:21:14:7:22 0/0:0:0:0:0:10:0%:17:1E0:53:10:6:4:10 0/0:0:0:0:0:26:0%:47:1E0:52:26:15:11:26 0/0:39:1:1:0:8:12.5%:8:5E-1:44:7:7:0:8 0/0:0:0:0:0:55:0%:99:1E0:44:55:28:27:55 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:42 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:44 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 0/0:0:0:0:0:53:0%:99:1E0:44:53:26:27:53 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:41 0/0:38:4:2:2:11:36.36%:4:4.5113E-2:38:7:4:3:11 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:23:0%:44:1E0:52:23:11:12:23 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:39:1:1:0:29:3.45%:45:5E-1:49:28:11:17:29 0/0:38:1:1:0:31:3.23%:48:5E-1:46:30:9:21:32 0/0:0:0:0:0:16:0%:29:1E0:43:16:7:9:18 0/0:39:1:1:0:32:3.12%:48:5E-1:40:31:16:15:32 0/0:0:0:0:0:16:0%:29:1E0:43:16:11:5:16 0/1:37:7:3:4:13:53.85%:25:2.6087E-3:44:6:1:5:13 0/0:38:1:1:0:16:6.25%:21:5E-1:44:15:7:8:16 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:18:6:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:23:14:38 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:25 0/0:0:0:0:0:16:0%:29:1E0:44:16:5:11:17 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:41 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:38 0/0:0:0:0:0:53:0%:99:1E0:44:53:31:22:54 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:37:1:1:0:44:2.27%:69:5E-1:43:43:26:17:47 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:41 0/0:39:1:1:0:26:3.85%:38:5E-1:45:25:14:11:26 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:24 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:47 0/0:0:0:0:0:55:0%:99:1E0:41:55:26:29:55 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:17 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:46 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:40 0/0:0:0:0:0:46:0%:85:1E0:43:46:18:28:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:44 0/0:60:1:1:0:40:2.5%:62:5E-1:39:39:21:18:40 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:41 0/0:0:0:0:0:37:0%:70:1E0:44:37:14:23:40 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:44:0%:81:1E0:38:44:19:25:44 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:41 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 0/0:0:0:0:0:41:0%:78:1E0:41:41:26:15:41 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:34 1/1:40:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:51 MTB_anc 3895269 . G C . PASS AC=6;AF=0.020;AN=298;ANN=C|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.844G>C|p.Glu282Gln|844/1182|844/1182|282/393||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895269G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895269G>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:58:0%:99:1E0:45:58:29:29:59 0/0:0:0:0:0:12:0%:21:1E0:50:12:6:6:12 0/0:38:1:0:1:51:1.96%:84:5E-1:45:50:29:21:51 0/0:0:0:0:0:26:0%:47:1E0:50:26:7:19:26 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:21:0%:40:1E0:46:21:7:14:21 0/0:38:1:1:0:16:6.25%:21:5E-1:48:15:7:8:16 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:38:1:1:0:34:2.94%:51:5E-1:49:33:21:12:35 0/0:54:4:2:2:20:20%:13:5.3015E-2:49:16:7:9:20 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:23 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:19:0%:37:1E0:51:19:10:9:19 0/0:0:0:0:0:43:0%:82:1E0:45:43:20:23:44 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:23:0%:44:1E0:47:23:16:7:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:28:0%:51:1E0:48:28:8:20:29 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:25 0/0:0:0:0:0:15:0%:29:1E0:46:15:5:10:15 0/0:0:0:0:0:48:0%:89:1E0:46:48:25:23:48 0/0:0:0:0:0:7:0%:14:1E0:53:7:3:4:7 0/0:38:2:2:0:24:8.33%:27:2.4468E-1:48:22:11:11:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:60:1:1:0:32:3.12%:48:5E-1:46:31:10:21:32 0/0:38:1:1:0:24:4.17%:34:5E-1:47:23:11:12:24 0/0:0:0:0:0:19:0%:37:1E0:49:19:5:14:19 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:15:26:41 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:33 0/1:38:7:4:3:9:77.78%:29:1.1312E-3:38:2:1:1:9 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:38:1:1:0:42:2.38%:66:5E-1:47:41:22:19:42 0/1:37:7:5:2:17:41.18%:24:3.6151E-3:51:10:8:2:17 0/0:0:0:0:0:56:0%:99:1E0:45:56:27:29:56 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:37 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:37:1:1:0:33:3.03%:52:5E-1:46:32:15:17:33 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:37:1:1:0:45:2.22%:73:5E-1:44:44:22:22:46 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:15:0%:29:1E0:49:15:9:6:15 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:24:0%:44:1E0:46:24:16:8:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:56:0%:99:1E0:44:56:30:26:56 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:32:0%:59:1E0:50:32:17:15:32 0/0:60:1:0:1:48:2.08%:76:5E-1:46:47:23:24:48 0/0:38:2:1:1:37:5.41%:50:2.4658E-1:47:35:16:19:38 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:37:5:2:3:16:31.25%:6:2.1691E-2:45:11:8:3:16 0/1:38:7:3:4:13:53.85%:25:2.6087E-3:40:6:3:3:13 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:36 0/0:0:0:0:0:21:0%:40:1E0:52:21:10:11:21 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:33:1:0:1:23:4.35%:34:5E-1:47:22:15:7:23 0/0:37:4:3:1:15:26.67%:8:4.9808E-2:50:11:7:4:15 0/0:0:0:0:0:24:0%:44:1E0:51:24:15:9:24 0/0:0:0:0:0:10:0%:17:1E0:43:10:8:2:10 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:50 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:44 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:25 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:51:0%:97:1E0:46:51:28:23:51 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:44 0/0:0:0:0:0:12:0%:21:1E0:38:12:8:4:12 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:21:0%:40:1E0:51:21:10:11:21 0/0:36:1:1:0:19:5.26%:28:5E-1:48:18:11:7:19 0/0:38:1:1:0:27:3.7%:41:5E-1:49:26:11:15:27 0/0:36:2:2:0:33:6.06%:44:2.4615E-1:47:31:9:22:33 0/0:38:1:0:1:16:6.25%:21:5E-1:43:15:7:8:16 0/1:36:11:6:5:31:35.48%:37:1.6659E-4:41:20:11:9:31 0/1:43:16:14:2:18:88.89%:76:2.0936E-8:49:2:0:2:19 0/1:37:7:2:5:13:53.85%:25:2.6087E-3:41:6:2:4:13 0/0:38:5:5:0:20:25%:10:2.3562E-2:44:15:8:7:20 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:18:7:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:43 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 0/0:45:3:1:2:16:18.75%:11:1.129E-1:45:13:6:7:16 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:39 0/0:39:1:1:0:50:2%:80:5E-1:42:49:30:19:50 0/0:0:0:0:0:26:0%:47:1E0:46:26:18:8:26 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:38:2:2:0:29:6.9%:37:2.4561E-1:43:27:14:13:29 0/0:38:1:1:0:45:2.22%:73:5E-1:42:44:27:17:45 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:38:1:1:0:23:4.35%:34:5E-1:44:22:12:10:23 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:19 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:47 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:21:0%:40:1E0:41:21:7:14:21 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:21 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:47 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:40 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:38 0/0:0:0:0:0:39:0%:74:1E0:42:39:14:25:40 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:43 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:37:1:0:1:39:2.56%:62:5E-1:38:38:19:19:39 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:41 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:41 0/0:0:0:0:0:23:0%:44:1E0:42:23:17:6:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:38:2:2:0:14:14.29%:12:2.4074E-1:39:12:10:2:14 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:45 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:47 MTB_anc 3895281 . T C . PASS AC=9;AF=0.030;AN=296;ANN=C|missense_variant|MODERATE|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.856T>C|p.Trp286Arg|856/1182|856/1182|286/393||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895281T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895281T>C||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:60:0%:99:1E0:44:60:29:31:60 0/0:0:0:0:0:12:0%:21:1E0:49:12:6:6:12 0/0:39:1:0:1:48:2.08%:76:5E-1:45:47:28:19:48 0/0:0:0:0:0:22:0%:40:1E0:50:22:4:18:23 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:39:1:1:0:17:5.88%:24:5E-1:48:16:7:9:17 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:34:1:1:0:32:3.12%:48:5E-1:50:31:20:11:32 0/0:53:3:2:1:19:15.79%:17:1.1486E-1:49:16:7:9:19 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:23 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:17 0/0:0:0:0:0:45:0%:85:1E0:44:45:21:24:46 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:24:0%:44:1E0:47:24:17:7:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:31:0%:59:1E0:46:31:9:22:31 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:23 0/0:0:0:0:0:24:0%:44:1E0:46:24:16:8:24 0/0:0:0:0:0:16:0%:29:1E0:46:16:6:10:16 0/0:0:0:0:0:50:0%:92:1E0:45:50:28:22:51 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:3:0:25:12%:25:1.1735E-1:47:22:11:11:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:34 0/0:60:1:1:0:32:3.12%:48:5E-1:44:31:10:21:32 0/0:39:1:1:0:24:4.17%:34:5E-1:48:23:11:12:24 0/0:0:0:0:0:20:0%:36:1E0:49:20:6:14:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:41 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:29 0/1:38:7:4:3:9:77.78%:29:1.1312E-3:38:2:1:1:9 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:40 0/0:39:2:1:1:43:4.65%:60:2.4706E-1:47:41:22:19:43 0/1:38:8:5:3:18:44.44%:28:1.4461E-3:51:10:8:2:18 0/0:0:0:0:0:54:0%:99:1E0:46:54:26:28:54 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:37 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:31 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:37:1:1:0:34:2.94%:51:5E-1:45:33:15:18:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:39 0/0:0:0:0:0:14:0%:25:1E0:49:14:9:5:16 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:36 0/0:0:0:0:0:22:0%:40:1E0:47:22:13:9:22 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:25 0/0:33:1:1:0:39:2.56%:62:5E-1:43:38:22:16:39 0/0:0:0:0:0:55:0%:99:1E0:44:55:30:25:55 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:60:1:0:1:47:2.13%:77:5E-1:45:46:23:23:47 0/0:39:2:1:1:38:5.26%:50:2.4667E-1:46:36:17:19:38 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/1:37:7:3:4:18:38.89%:24:3.8123E-3:47:11:8:3:18 0/1:38:7:3:4:13:53.85%:25:2.6087E-3:45:6:3:3:13 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:20:0%:36:1E0:51:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:33:1:1:0:24:4.17%:34:5E-1:45:23:15:8:24 0/0:37:5:3:2:16:31.25%:6:2.1691E-2:51:11:7:4:16 0/0:0:0:0:0:25:0%:48:1E0:52:25:16:9:25 0/0:38:3:1:2:10:30%:4:1.0526E-1:46:7:7:0:10 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:49 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:45:0%:85:1E0:45:45:27:18:45 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:25 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:23 0/0:0:0:0:0:52:0%:96:1E0:46:52:28:24:53 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:45 0/1:38:6:4:2:13:46.15%:21:7.4534E-3:37:7:5:2:13 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:38:1:1:0:18:5.56%:24:5E-1:47:17:11:6:18 0/0:39:1:1:0:28:3.57%:41:5E-1:49:27:12:15:28 0/0:39:1:1:0:33:3.03%:52:5E-1:47:32:12:20:35 0/0:39:1:0:1:15:6.67%:21:5E-1:44:14:6:8:16 0/1:40:10:5:5:29:34.48%:34:3.8387E-4:41:19:10:9:29 1/1:44:18:15:3:20:90%:87:1.6758E-9:49:2:0:2:20 0/1:37:10:4:6:16:62.5%:39:1.2413E-4:40:6:2:4:16 0/0:37:5:5:0:21:23.81%:12:2.3921E-2:47:16:9:7:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:19:8:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:44 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:22:0%:40:1E0:42:22:14:8:24 0/0:46:3:1:2:17:17.65%:14:1.1364E-1:42:14:6:8:17 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:39 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:38 0/0:0:0:0:0:46:0%:85:1E0:42:46:29:17:47 0/0:0:0:0:0:27:0%:52:1E0:44:27:19:8:27 0/0:0:0:0:0:31:0%:59:1E0:39:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:32:2:2:0:27:7.41%:34:2.4528E-1:43:25:11:14:29 0/0:39:1:1:0:42:2.38%:66:5E-1:41:41:25:16:44 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:39:1:1:0:22:4.55%:31:5E-1:44:21:11:10:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:49:0%:93:1E0:43:49:20:29:49 0/0:0:0:0:0:48:0%:89:1E0:43:48:23:25:49 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:21 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:45 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:35 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:44 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:41 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:44 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:42 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:37 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:40 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:34 0/0:0:0:0:0:41:0%:78:1E0:41:41:23:18:41 0/0:0:0:0:0:22:0%:40:1E0:41:22:16:6:22 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:39:2:2:0:14:14.29%:12:2.4074E-1:40:12:10:2:14 0/0:0:0:0:0:51:0%:97:1E0:42:51:23:28:51 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:47 MTB_anc 3895282 . G A . PASS AC=9;AF=0.030;AN=296;ANN=A|stop_gained|HIGH|PPE60_Rv3478|gene3551|transcript|Transcript_gene3551|Coding|1/1|c.857G>A|p.Trp286*|857/1182|857/1182|286/393||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3895282G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3895282G>A||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:44:59:30:29:60 0/0:0:0:0:0:12:0%:21:1E0:49:12:6:6:12 0/0:39:1:0:1:48:2.08%:76:5E-1:45:47:28:19:49 0/0:0:0:0:0:23:0%:44:1E0:50:23:5:18:23 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:39:1:1:0:16:6.25%:21:5E-1:49:15:6:9:16 0/0:60:1:1:0:28:3.57%:41:5E-1:46:27:11:16:28 0/0:34:1:1:0:32:3.12%:48:5E-1:50:31:20:11:32 0/0:53:3:2:1:19:15.79%:17:1.1486E-1:49:16:7:9:19 0/0:0:0:0:0:21:0%:40:1E0:45:21:6:15:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:16:0%:29:1E0:51:16:9:7:16 0/0:0:0:0:0:46:0%:85:1E0:44:46:21:25:46 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:22 0/0:0:0:0:0:22:0%:40:1E0:47:22:15:7:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:60:1:1:0:31:3.23%:48:5E-1:47:30:9:21:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:16:0%:29:1E0:45:16:6:10:16 0/0:0:0:0:0:50:0%:92:1E0:45:50:28:22:51 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:3:3:0:25:12%:25:1.1735E-1:47:22:11:11:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:11:20:32 0/0:35:2:2:0:25:8%:31:2.449E-1:48:23:11:12:26 0/0:60:1:1:0:21:4.76%:31:5E-1:49:20:6:14:21 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:32 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:40 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:29 0/1:37:8:4:4:10:80%:34:3.5723E-4:38:2:1:1:10 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:15:25:40 0/0:36:3:2:1:42:7.14%:49:1.2048E-1:49:39:20:19:43 0/1:38:8:5:3:18:44.44%:28:1.4461E-3:51:10:8:2:18 0/0:0:0:0:0:54:0%:99:1E0:46:54:26:28:54 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:31:0%:59:1E0:48:31:16:15:31 0/0:33:1:1:0:33:3.03%:52:5E-1:47:32:19:13:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:48:2:1:1:33:6.06%:44:2.4615E-1:46:31:15:16:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:37 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:16 0/0:60:1:1:0:35:2.86%:55:5E-1:43:34:14:20:36 0/0:37:1:1:0:22:4.55%:31:5E-1:47:21:12:9:22 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:25 0/0:33:1:1:0:39:2.56%:62:5E-1:43:38:22:16:39 0/0:0:0:0:0:55:0%:99:1E0:44:55:30:25:55 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:31 0/0:60:1:0:1:47:2.13%:77:5E-1:45:46:23:23:47 0/0:39:2:1:1:38:5.26%:50:2.4667E-1:46:36:17:19:38 0/0:60:1:1:0:31:3.23%:48:5E-1:46:30:11:19:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/1:38:7:3:4:18:38.89%:24:3.8123E-3:46:11:8:3:18 0/1:41:8:4:4:14:57.14%:30:9.6618E-4:45:6:3:3:14 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:42 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:20:0%:36:1E0:53:20:10:10:20 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:37:1:1:0:24:4.17%:34:5E-1:45:23:15:8:24 0/0:38:5:3:2:16:31.25%:6:2.1691E-2:51:11:7:4:16 0/0:0:0:0:0:25:0%:48:1E0:51:25:16:9:25 0/0:44:4:1:3:11:36.36%:4:4.5113E-2:47:7:7:0:11 0/0:0:0:0:0:48:0%:89:1E0:43:48:28:20:49 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:43 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:47:0%:89:1E0:42:47:27:20:48 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:30 0/0:34:2:1:1:25:8%:31:2.449E-1:43:23:12:11:25 0/0:0:0:0:0:53:0%:99:1E0:45:53:28:25:53 0/0:0:0:0:0:45:0%:85:1E0:45:45:18:27:45 0/1:38:6:4:2:13:46.15%:21:7.4534E-3:37:7:5:2:13 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:36 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:22:0%:40:1E0:50:22:11:11:23 0/0:39:1:1:0:18:5.56%:24:5E-1:48:17:11:6:18 0/0:39:1:1:0:29:3.45%:41:5E-1:48:27:11:16:29 0/0:39:1:1:0:35:2.86%:55:5E-1:47:34:12:22:35 0/0:34:1:0:1:15:6.67%:21:5E-1:45:14:6:8:16 0/1:40:9:4:5:28:32.14%:30:9.1169E-4:41:19:10:9:29 1/1:44:18:15:3:20:90%:87:1.6758E-9:48:2:0:2:20 0/1:38:10:4:6:16:62.5%:39:1.2413E-4:40:6:2:4:16 0/0:38:5:5:0:20:25%:10:2.3562E-2:48:15:9:6:21 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:27 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:45 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:46:3:1:2:17:17.65%:14:1.1364E-1:43:14:6:8:17 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:38 0/0:0:0:0:0:46:0%:85:1E0:43:46:29:17:47 0/0:0:0:0:0:27:0%:52:1E0:45:27:19:8:27 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:37:2:2:0:29:6.9%:37:2.4561E-1:42:27:13:14:29 0/0:39:1:1:0:40:2.5%:62:5E-1:41:39:25:14:43 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:39:1:1:0:22:4.55%:31:5E-1:44:21:11:10:22 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:18 0/0:0:0:0:0:49:0%:93:1E0:43:49:20:29:49 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:49 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:20 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:42:0%:77:1E0:41:42:22:20:44 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:44 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:41 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:44 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:42 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:30 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 0/0:38:1:1:0:40:2.5%:62:5E-1:47:39:21:18:40 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:37:0%:70:1E0:41:37:23:14:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:17:22:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:21:13:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:41 0/0:0:0:0:0:22:0%:40:1E0:41:22:16:6:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:39:2:2:0:14:14.29%:12:2.4074E-1:40:12:10:2:14 0/0:0:0:0:0:51:0%:97:1E0:42:51:23:28:51 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:44 MTB_anc 3895727 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|PPE60_Rv3478-Rv3479_Rv3479|gene3551-gene3552|intergenic_region|gene3551-gene3552|||n.3895727A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:63:21:42:63:100%:99:1.657E-37:0:0:0:0:64 1/1:49:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:22:9:13:23:95.65%:99:2.9149E-12:60:1:1:0:23 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:12:4:8:13:92.31%:58:1.3461E-6:34:1:1:0:14 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:50:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:51:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:54:20:34:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:52:35:17:18:36:97.22%:99:8.3613E-20:39:1:0:1:36 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:50:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:61:33:28:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:51 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:61:34:27:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:50:16:34:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 MTB_anc 3898712 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv3479_Rv3479|gene3552|transcript|Transcript_gene3552|Coding|1/1|c.2893G>A|p.Ala965Thr|2893/3066|2893/3066|965/1021||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3898712G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3898712G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:25:24:49 0/0:0:0:0:0:19:0%:37:1E0:49:19:8:11:19 0/0:0:0:0:0:49:0%:93:1E0:48:49:23:26:49 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:31 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:25 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:34 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:30 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:49:0%:93:1E0:42:49:24:25:49 0/0:0:0:0:0:23:0%:44:1E0:49:23:9:14:23 0/0:0:0:0:0:57:0%:99:1E0:43:57:31:26:59 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:19:0%:37:1E0:52:19:14:5:19 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:50:0%:92:1E0:46:50:30:20:51 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:34 0/0:0:0:0:0:26:0%:47:1E0:47:26:19:7:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:21 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:34 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:41 0/0:0:0:0:0:60:0%:99:1E0:46:60:30:30:60 0/1:48:41:20:21:50:82%:99:1.2455E-19:47:9:7:2:51 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:60:1:1:0:34:2.94%:51:5E-1:40:33:18:15:36 0/0:0:0:0:0:57:0%:99:1E0:46:57:23:34:57 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:19 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:46 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:48 0/0:0:0:0:0:41:0%:78:1E0:47:41:18:23:41 0/0:0:0:0:0:14:0%:25:1E0:48:14:7:7:14 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:20 0/0:0:0:0:0:26:0%:47:1E0:40:26:16:10:29 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:56:0%:99:1E0:40:56:28:28:58 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:47 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:21 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:51 0/0:0:0:0:0:41:0%:78:1E0:49:41:18:23:42 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:46 0/0:0:0:0:0:29:0%:55:1E0:46:29:9:20:29 0/0:0:0:0:0:55:0%:99:1E0:45:55:35:20:55 0/0:0:0:0:0:58:0%:99:1E0:45:58:34:24:58 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:23 0/0:0:0:0:0:34:0%:62:1E0:47:34:17:17:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:60:1:0:1:31:3.23%:48:5E-1:48:30:15:15:31 0/0:0:0:0:0:13:0%:25:1E0:41:13:3:10:13 0/0:0:0:0:0:36:0%:66:1E0:50:36:23:13:36 0/0:0:0:0:0:44:0%:81:1E0:41:44:20:24:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:42 0/0:0:0:0:0:36:0%:66:1E0:47:36:13:23:37 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:45 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:21:10:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:27:0%:52:1E0:42:27:20:7:28 0/0:0:0:0:0:17:0%:33:1E0:46:17:6:11:17 0/0:0:0:0:0:39:0%:74:1E0:47:39:27:12:39 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:29 0/0:0:0:0:0:42:0%:77:1E0:49:42:20:22:43 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:49 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:39 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:26 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:9:9:18 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:20 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:44 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:12:15:30 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:42:0%:77:1E0:41:42:18:24:44 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:47 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:21:11:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:52:0%:96:1E0:41:52:30:22:52 0/0:0:0:0:0:47:0%:89:1E0:44:47:19:28:47 0/0:60:1:1:0:30:3.33%:44:5E-1:41:29:9:20:31 0/0:0:0:0:0:19:0%:37:1E0:40:19:10:9:19 0/0:0:0:0:0:51:0%:97:1E0:39:51:30:21:53 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:44 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:47 0/0:0:0:0:0:50:0%:92:1E0:38:50:26:24:50 0/0:0:0:0:0:46:0%:85:1E0:39:46:24:22:49 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:41 0/0:0:0:0:0:46:0%:85:1E0:40:46:22:24:48 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:38 0/0:0:0:0:0:49:0%:93:1E0:38:49:29:20:52 0/0:0:0:0:0:38:0%:70:1E0:38:38:20:18:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:39 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:44 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:65:0%:99:1E0:38:65:32:33:66 0/0:0:0:0:0:47:0%:89:1E0:42:47:24:23:47 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:50 0/0:0:0:0:0:49:0%:93:1E0:39:49:27:22:49 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:49 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:42 MTB_anc 3898869 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3479_Rv3479|gene3552|transcript|Transcript_gene3552|Coding|1/1|c.3050A>C|p.Asn1017Thr|3050/3066|3050/3066|1017/1021||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3898869A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3898869A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:51:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:31:14:17:32:96.88%:99:1.8007E-17:38:1:1:0:33 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:14:17:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:42:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:59:40:19:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:38:21:17:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:43:24:19:44:97.73%:99:1.7144E-24:37:1:0:1:44 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:81:43:38:81:100%:99:2.7329E-48:0:0:0:0:81 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:54:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:54:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:50:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:38:17:21:39:97.44%:99:1.4697E-21:60:1:0:1:40 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:35:19:16:36:97.22%:99:8.3613E-20:33:1:0:1:37 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:14:18:33:96.97%:99:4.7095E-18:60:1:1:0:33 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:51 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:41:19:22:42:97.62%:99:2.5612E-23:33:1:0:1:44 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:61:33:28:61:100%:99:2.609E-36:0:0:0:0:61 1/1:40:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:46:23:23:47:97.87%:99:2.4343E-27:0:0:0:0:48 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 3902828 . TCCCGGTACCCG T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|custom|MODIFIER|||CUSTOM&additionnal_annotations|RBS|||n.3902829_3902839delCCCGGTACCCG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3902829_3902839delCCCGGTACCCG||||||,T|intergenic_region|MODIFIER|Rv3483c_Rv3483c-Rv3484_Rv3484|gene3556-gene3557|intergenic_region|gene3556-gene3557|||n.3902829_3902839delCCCGGTACCCG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:36:39:15:24:43 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:12 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:34 0/0:0:0:0:0:13:0%:25:1E0:39:13:7:6:13 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:21 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:22 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:20 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:6:18:27 0/0:0:0:0:0:41:0%:78:1E0:37:41:12:29:42 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:15 0/0:0:0:0:0:31:0%:59:1E0:37:31:12:19:35 0/0:0:0:0:0:26:0%:47:1E0:37:26:9:17:29 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:29 0/0:0:0:0:0:22:0%:40:1E0:38:22:5:17:23 0/0:0:0:0:0:17:0%:33:1E0:34:17:5:12:19 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:15 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:19 0/0:0:0:0:0:26:0%:47:1E0:36:26:10:16:26 0/0:0:0:0:0:49:0%:93:1E0:38:49:20:29:56 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:42:0%:77:1E0:36:42:10:32:47 0/0:0:0:0:0:36:0%:66:1E0:37:36:20:16:40 0/0:0:0:0:0:22:0%:40:1E0:41:22:6:16:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:33 0/0:0:0:0:0:15:0%:29:1E0:41:15:9:6:17 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:27 0/0:0:0:0:0:29:0%:55:1E0:38:29:11:18:34 0/0:0:0:0:0:34:0%:62:1E0:37:34:16:18:36 0/0:0:0:0:0:27:0%:52:1E0:36:27:12:15:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:33:0%:63:1E0:38:33:13:20:35 0/0:0:0:0:0:21:0%:40:1E0:38:21:4:17:22 0/0:0:0:0:0:22:0%:40:1E0:38:22:8:14:23 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:22 0/0:0:0:0:0:44:0%:81:1E0:41:44:16:28:50 0/0:0:0:0:0:37:0%:70:1E0:37:37:14:23:40 0/0:0:0:0:0:37:0%:70:1E0:38:37:15:22:39 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:29 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:36 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:26 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:23 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:21 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:40 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:28 0/0:0:0:0:0:37:0%:70:1E0:36:37:14:23:38 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:35 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:25 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:20 0/0:0:0:0:0:40:0%:74:1E0:35:40:13:27:43 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:28:0%:51:1E0:39:28:9:19:31 0/1:34:25:5:20:26:89.29%:99:5.8768E-13:32:3:1:2:28 0/0:0:0:0:0:50:0%:92:1E0:36:50:22:28:53 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:29 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:23 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:36 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:22 0/0:0:0:0:0:26:0%:47:1E0:37:26:7:19:32 0/0:0:0:0:0:32:0%:59:1E0:36:32:12:20:34 0/0:0:0:0:0:23:0%:44:1E0:41:23:6:17:28 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:32 0/0:0:0:0:0:52:0%:96:1E0:38:52:18:34:53 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:23 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:41 0/0:0:0:0:0:14:0%:25:1E0:36:14:2:12:14 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:37 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:29 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:18 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:32 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:37 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:28 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:23 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:37:0%:70:1E0:37:37:14:23:40 0/0:0:0:0:0:32:0%:59:1E0:36:32:11:21:33 0/0:0:0:0:0:22:0%:40:1E0:38:22:8:14:24 0/0:0:0:0:0:42:0%:77:1E0:38:42:17:25:43 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:31 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:22 0/0:0:0:0:0:29:0%:55:1E0:36:29:11:18:29 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:28 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:8:20:29 0/0:0:0:0:0:25:0%:48:1E0:39:25:8:17:30 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:32 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:20 0/0:0:0:0:0:37:0%:70:1E0:38:37:19:18:42 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:29 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:38 0/0:0:0:0:0:26:0%:47:1E0:37:26:11:15:27 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:9:17:30 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:28 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:35 0/0:0:0:0:0:30:0%:55:1E0:34:30:10:20:32 0/0:0:0:0:0:26:0%:47:1E0:35:26:14:12:33 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:16 0/0:0:0:0:0:19:0%:37:1E0:35:19:11:8:21 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:26 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:29 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:25 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:7:13:24 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:22 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:27 0/0:0:0:0:0:30:0%:55:1E0:35:30:10:20:33 0/0:0:0:0:0:34:0%:62:1E0:35:34:13:21:36 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:23 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:20 0/0:0:0:0:0:17:0%:33:1E0:36:17:9:8:18 0/0:0:0:0:0:43:0%:82:1E0:36:43:18:25:46 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:41 0/0:0:0:0:0:22:0%:40:1E0:37:22:7:15:25 0/0:0:0:0:0:23:0%:44:1E0:38:23:5:18:24 0/0:0:0:0:0:35:0%:67:1E0:35:35:11:24:42 0/0:0:0:0:0:28:0%:51:1E0:36:28:8:20:33 0/0:0:0:0:0:32:0%:59:1E0:35:32:18:14:35 0/0:0:0:0:0:33:0%:63:1E0:35:33:11:22:36 0/0:0:0:0:0:31:0%:59:1E0:34:31:10:21:35 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:24 0/0:0:0:0:0:29:0%:55:1E0:36:29:16:13:36 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:22 0/0:0:0:0:0:31:0%:59:1E0:34:31:12:19:36 0/0:0:0:0:0:25:0%:48:1E0:35:25:10:15:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:10:18:32 0/0:0:0:0:0:14:0%:25:1E0:35:14:1:13:17 0/0:0:0:0:0:28:0%:51:1E0:37:28:12:16:32 0/0:0:0:0:0:33:0%:63:1E0:36:33:12:21:40 0/0:0:0:0:0:33:0%:63:1E0:37:33:7:26:35 0/0:0:0:0:0:31:0%:59:1E0:37:31:11:20:34 0/0:0:0:0:0:32:0%:59:1E0:34:32:13:19:37 0/0:0:0:0:0:25:0%:48:1E0:38:25:10:15:28 0/0:0:0:0:0:23:0%:44:1E0:39:23:13:10:24 0/0:0:0:0:0:22:0%:40:1E0:39:22:7:15:24 0/0:0:0:0:0:44:0%:81:1E0:38:44:17:27:46 0/0:0:0:0:0:41:0%:78:1E0:36:41:16:25:43 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:18 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:30 0/0:0:0:0:0:33:0%:63:1E0:36:33:13:20:36 0/0:0:0:0:0:46:0%:85:1E0:38:46:17:29:54 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:28 MTB_anc 3909235 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|otsA_Rv3490|gene3563|transcript|Transcript_gene3563|Coding|1/1|c.1000C>G|p.Leu334Val|1000/1503|1000/1503|334/500||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.3909235C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3909235C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:55:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:53:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:51:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:60 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:19:12:7:20:95%:98:1.5234E-10:38:1:1:0:20 1/1:51:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:61:28:33:61:100%:99:2.609E-36:0:0:0:0:62 1/1:50:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:66:34:32:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:29:13:16:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:45:44:20:24:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:62:33:29:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:62:25:37:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 3910540 . G A . PASS AC=14;AF=0.047;AN=300;ANN=A|synonymous_variant|LOW|Rv3492c_Rv3492c|gene3565|transcript|Transcript_gene3565|Coding|1/1|c.408C>T|p.Tyr136Tyr|408/483|408/483|136/160||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3910540G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3910540G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:41 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:21 0/0:0:0:0:0:48:0%:89:1E0:45:48:22:26:48 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:38 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:41:0%:78:1E0:47:41:19:22:41 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:51:41:22:19:42 0/0:0:0:0:0:33:0%:63:1E0:48:33:23:10:33 0/0:0:0:0:0:40:0%:74:1E0:50:40:21:19:40 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:42 0/0:0:0:0:0:30:0%:55:1E0:53:30:11:19:30 0/0:0:0:0:0:50:0%:92:1E0:45:50:27:23:50 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:27 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:29:0%:55:1E0:48:29:19:10:29 0/0:0:0:0:0:47:0%:89:1E0:46:47:20:27:48 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:41:0%:78:1E0:49:41:22:19:42 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:39 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:72:0%:99:1E0:48:72:40:32:72 0/0:0:0:0:0:40:0%:74:1E0:46:40:24:16:41 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:44 0/0:0:0:0:0:31:0%:59:1E0:47:31:12:19:31 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:47 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:33:0%:63:1E0:49:33:12:21:33 0/0:0:0:0:0:43:0%:82:1E0:44:43:18:25:43 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:45:0%:85:1E0:47:45:22:23:45 0/0:0:0:0:0:25:0%:48:1E0:49:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:9:22:31 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:21 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:47 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:48 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:53 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:46 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:48 0/0:0:0:0:0:37:0%:70:1E0:47:37:15:22:37 0/0:0:0:0:0:44:0%:81:1E0:43:44:20:24:44 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:47 0/0:0:0:0:0:26:0%:47:1E0:45:26:8:18:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:23:0%:44:1E0:52:23:15:8:23 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:42:0%:77:1E0:47:42:27:15:42 0/0:0:0:0:0:33:0%:63:1E0:50:33:17:16:33 0/0:0:0:0:0:28:0%:51:1E0:47:28:17:11:28 0/0:0:0:0:0:38:0%:70:1E0:51:38:19:19:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:12:26:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:38:1:1:0:24:4.17%:34:5E-1:47:23:11:12:25 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:40 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:36 0/0:0:0:0:0:37:0%:70:1E0:49:37:16:21:37 0/0:0:0:0:0:29:0%:55:1E0:52:29:9:20:29 0/0:0:0:0:0:44:0%:81:1E0:45:44:22:22:44 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:52:0%:96:1E0:48:52:33:19:54 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:60:1:1:0:32:3.12%:48:5E-1:43:31:17:14:32 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:31:0%:59:1E0:48:31:14:17:31 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:42 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:47:0%:89:1E0:47:47:18:29:47 0/0:0:0:0:0:34:0%:62:1E0:50:34:18:16:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:53 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:45 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:46 0/0:0:0:0:0:35:0%:67:1E0:39:35:15:20:35 0/0:0:0:0:0:64:0%:99:1E0:43:64:28:36:66 0/0:0:0:0:0:61:0%:99:1E0:43:61:31:30:61 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:30 0/0:0:0:0:0:62:0%:99:1E0:40:62:30:32:65 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:45 0/0:0:0:0:0:41:0%:78:1E0:40:41:13:28:42 0/0:0:0:0:0:47:0%:89:1E0:39:47:23:24:47 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:50 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:41 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:47 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:41:0%:78:1E0:39:41:26:15:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:51:0%:97:1E0:40:51:26:25:52 0/0:0:0:0:0:53:0%:99:1E0:44:53:27:26:53 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:48:0%:89:1E0:41:48:20:28:48 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:49:0%:93:1E0:43:49:28:21:49 0/0:0:0:0:0:22:0%:40:1E0:44:22:16:6:22 0/0:0:0:0:0:49:0%:93:1E0:44:49:21:28:49 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:57:0%:99:1E0:44:57:29:28:57 0/0:0:0:0:0:45:0%:85:1E0:46:45:19:26:45 MTB_anc 3912293 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|mce4F_Rv3494c|gene3567|transcript|Transcript_gene3567|Coding|1/1|c.1077C>G|p.Asp359Glu|1077/1695|1077/1695|359/564||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3912293G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3912293G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:40:41:25:16:43 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:17 0/0:0:0:0:0:40:0%:74:1E0:43:40:23:17:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:10:13:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:27 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:16 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:28:0%:51:1E0:42:28:19:9:30 0/0:0:0:0:0:47:0%:89:1E0:40:47:27:20:50 0/0:0:0:0:0:21:0%:40:1E0:46:21:15:6:21 0/0:0:0:0:0:41:0%:78:1E0:38:41:24:17:42 0/0:0:0:0:0:25:0%:48:1E0:40:25:15:10:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:28:12:40 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:22 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:30 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:22 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:40 0/0:0:0:0:0:13:0%:25:1E0:45:13:10:3:13 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:19:12:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:21:8:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:0:0:0:0:37:0%:70:1E0:47:37:25:12:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:25:13:38 0/0:0:0:0:0:50:0%:92:1E0:41:50:28:22:51 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:34 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:39:1:0:1:27:3.7%:41:5E-1:40:26:13:13:27 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:32 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:37 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:39 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:42 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:41 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:17 0/0:0:0:0:0:43:0%:82:1E0:38:43:24:19:43 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:29:0%:55:1E0:42:29:20:9:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:54:0%:99:1E0:39:54:36:18:54 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:32 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:29:14:43 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:39 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:45 0/0:0:0:0:0:42:0%:77:1E0:40:42:30:12:44 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:56:0%:99:1E0:40:56:33:23:57 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:23:10:33 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:22 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:38:1:0:1:28:3.57%:41:5E-1:43:27:16:11:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:48:36:16:20:36 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:40 0/0:0:0:0:0:19:0%:37:1E0:37:19:13:6:20 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:44:0%:81:1E0:45:44:28:16:44 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:39 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:30 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:27 0/0:0:0:0:0:16:0%:29:1E0:42:16:12:4:16 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:46:0%:85:1E0:42:46:31:15:47 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:49:0%:93:1E0:38:49:28:21:50 0/0:0:0:0:0:26:0%:47:1E0:42:26:20:6:26 0/0:0:0:0:0:47:0%:89:1E0:42:47:26:21:47 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:35 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:37:0%:70:1E0:39:37:23:14:38 0/0:0:0:0:0:29:0%:55:1E0:39:29:10:19:32 0/0:0:0:0:0:15:0%:29:1E0:41:15:11:4:15 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:24:15:39 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:37 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:0:0:0:0:24:0%:44:1E0:38:24:13:11:24 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:40 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:29 0/0:0:0:0:0:41:0%:78:1E0:38:41:19:22:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:33 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:43 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:44 0/0:0:0:0:0:49:0%:93:1E0:38:49:32:17:49 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:36 0/0:0:0:0:0:38:0%:70:1E0:37:38:21:17:38 0/0:0:0:0:0:43:0%:82:1E0:41:43:27:16:44 0/0:0:0:0:0:41:0%:78:1E0:36:41:26:15:43 0/0:0:0:0:0:28:0%:51:1E0:36:28:22:6:29 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:34 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:38 0/0:0:0:0:0:29:0%:55:1E0:37:29:16:13:31 0/0:0:0:0:0:40:0%:74:1E0:38:40:26:14:40 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:25 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:51:0%:97:1E0:39:51:27:24:52 0/0:0:0:0:0:42:0%:77:1E0:40:42:25:17:43 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:37 0/0:0:0:0:0:33:0%:63:1E0:37:33:21:12:33 0/0:0:0:0:0:29:0%:55:1E0:39:29:22:7:29 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:37 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:22:21:43 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 MTB_anc 3913651 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|lprN_Rv3495c|gene3568|transcript|Transcript_gene3568|Coding|1/1|c.884C>T|p.Thr295Ile|884/1155|884/1155|295/384||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3913651G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.3913651G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:42:46:20:26:46 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:50:0%:92:1E0:43:50:26:24:51 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:40:0%:74:1E0:50:40:22:18:41 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:33:0%:63:1E0:50:33:12:21:33 0/0:0:0:0:0:29:0%:55:1E0:51:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:43 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:38 0/0:0:0:0:0:25:0%:48:1E0:45:25:19:6:25 0/0:0:0:0:0:32:0%:59:1E0:41:32:20:12:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:17:0%:33:1E0:40:17:11:6:17 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:48 0/0:0:0:0:0:34:0%:62:1E0:49:34:21:13:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:33:0%:63:1E0:48:33:24:9:33 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:27 0/0:0:0:0:0:25:0%:48:1E0:50:25:14:11:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:37:0%:70:1E0:51:37:23:14:37 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:16 0/0:0:0:0:0:30:0%:55:1E0:51:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:60:0%:99:1E0:46:60:30:30:60 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:48 0/0:0:0:0:0:40:0%:74:1E0:42:40:26:14:41 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:22 0/0:38:1:1:0:26:3.85%:38:5E-1:44:25:11:14:26 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:25 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:43:0%:82:1E0:47:43:18:25:43 0/0:0:0:0:0:17:0%:33:1E0:56:17:9:8:17 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:36:0%:66:1E0:51:36:17:19:36 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:17 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:45 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:36:0%:66:1E0:48:36:16:20:36 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:19 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:38:0%:70:1E0:46:38:21:17:38 0/0:0:0:0:0:35:0%:67:1E0:46:35:25:10:37 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:33 0/0:0:0:0:0:62:0%:99:1E0:46:62:30:32:63 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:37:0%:70:1E0:46:37:14:23:37 0/0:0:0:0:0:14:0%:25:1E0:51:14:7:7:14 0/0:0:0:0:0:31:0%:59:1E0:47:31:21:10:31 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:39:0%:74:1E0:50:39:14:25:39 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:22 0/0:0:0:0:0:29:0%:55:1E0:51:29:14:15:29 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:41:0%:78:1E0:47:41:25:16:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:28 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:13:20:34 0/0:0:0:0:0:25:0%:48:1E0:50:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:23:12:35 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:23:6:29 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:48 0/0:0:0:0:0:35:0%:67:1E0:45:35:21:14:36 0/0:0:0:0:0:43:0%:82:1E0:41:43:27:16:43 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:25 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:44 0/0:0:0:0:0:47:0%:89:1E0:45:47:29:18:48 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:38 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:24 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:36 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:41 0/0:0:0:0:0:42:0%:77:1E0:46:42:24:18:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:40:31:15:16:31 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:44 0/0:0:0:0:0:44:0%:81:1E0:38:44:25:19:45 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:31 0/0:0:0:0:0:41:0%:78:1E0:43:41:27:14:41 0/0:0:0:0:0:34:0%:62:1E0:45:34:22:12:34 0/0:0:0:0:0:54:0%:99:1E0:45:54:27:27:54 0/0:0:0:0:0:45:0%:85:1E0:42:45:14:31:45 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:50:0%:92:1E0:38:50:27:23:50 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:37 0/0:0:0:0:0:51:0%:97:1E0:40:51:31:20:54 0/0:0:0:0:0:36:0%:66:1E0:37:36:13:23:40 0/0:0:0:0:0:48:0%:89:1E0:40:48:25:23:49 0/0:36:1:1:0:37:2.7%:59:5E-1:37:36:26:10:38 0/0:0:0:0:0:57:0%:99:1E0:42:57:26:31:57 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:46:0%:85:1E0:39:46:24:22:50 0/0:0:0:0:0:50:0%:92:1E0:42:50:25:25:50 0/0:0:0:0:0:48:0%:89:1E0:43:48:21:27:48 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:39 0/0:0:0:0:0:66:0%:99:1E0:39:66:32:34:67 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:42:0%:77:1E0:42:42:27:15:42 0/0:0:0:0:0:38:0%:70:1E0:39:38:25:13:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:47 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:45 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:48:0%:89:1E0:44:48:23:25:48 0/0:0:0:0:0:53:0%:99:1E0:41:53:24:29:54 0/0:0:0:0:0:58:0%:99:1E0:44:58:30:28:58 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:37 MTB_anc 3917586 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|mce4B_Rv3498c|gene3571|transcript|Transcript_gene3571|Coding|1/1|c.413C>T|p.Pro138Leu|413/1053|413/1053|138/350||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3917586G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3917586G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:45 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:47:0%:89:1E0:46:47:28:19:47 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:34 0/0:0:0:0:0:36:0%:66:1E0:49:36:17:19:36 0/0:0:0:0:0:11:0%:22:1E0:46:11:6:5:14 0/0:0:0:0:0:24:0%:44:1E0:51:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:48:41:17:24:41 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:22 0/0:0:0:0:0:45:0%:85:1E0:45:45:24:21:45 0/0:0:0:0:0:19:0%:37:1E0:54:19:11:8:19 0/0:0:0:0:0:59:0%:99:1E0:47:59:37:22:59 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:30:0%:55:1E0:52:30:16:14:31 0/0:0:0:0:0:26:0%:47:1E0:50:26:11:15:27 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:18 0/0:0:0:0:0:20:0%:36:1E0:41:20:14:6:20 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:35 0/0:0:0:0:0:28:0%:51:1E0:48:28:18:10:28 0/0:0:0:0:0:50:0%:92:1E0:46:50:27:23:51 0/0:0:0:0:0:21:0%:40:1E0:49:21:6:15:21 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:24 0/0:0:0:0:0:15:0%:29:1E0:43:15:10:5:17 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:38:1:1:0:22:4.55%:31:5E-1:46:21:7:14:22 0/0:60:1:1:0:24:4.17%:34:5E-1:50:23:10:13:24 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:33 0/0:0:0:0:0:39:0%:74:1E0:47:39:15:24:39 0/0:0:0:0:0:57:0%:99:1E0:48:57:26:31:58 0/0:0:0:0:0:45:0%:85:1E0:47:45:19:26:48 0/0:0:0:0:0:48:0%:89:1E0:46:48:18:30:48 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:45 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:47:0%:89:1E0:45:47:26:21:47 0/0:0:0:0:0:15:0%:29:1E0:52:15:10:5:16 0/0:0:0:0:0:20:0%:36:1E0:40:20:14:6:22 0/0:0:0:0:0:17:0%:33:1E0:48:17:11:6:18 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:21:0%:40:1E0:39:21:5:16:23 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:20 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:43 0/0:0:0:0:0:42:0%:77:1E0:50:42:18:24:44 0/0:0:0:0:0:22:0%:40:1E0:50:22:13:9:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:11:16:27 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:26 0/0:0:0:0:0:61:0%:99:1E0:45:61:31:30:61 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:14:26:41 0/0:0:0:0:0:20:0%:36:1E0:54:20:8:12:21 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:35:0%:67:1E0:50:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:51:29:15:14:29 0/0:0:0:0:0:36:0%:66:1E0:52:36:20:16:36 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:37 0/0:0:0:0:0:27:0%:52:1E0:50:27:12:15:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:38 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:26 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:19:21:40 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:46:0%:85:1E0:40:46:27:19:46 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:22:0%:40:1E0:50:22:14:8:22 0/0:0:0:0:0:27:0%:52:1E0:45:27:19:8:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:28 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:19 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:22:0%:40:1E0:53:22:11:11:22 0/0:0:0:0:0:47:0%:89:1E0:44:47:16:31:48 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:41:0%:78:1E0:42:41:28:13:41 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:45 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:26:14:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:20:11:33 0/0:0:0:0:0:24:0%:44:1E0:45:24:16:8:26 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:27:0%:52:1E0:46:27:8:19:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:31 0/0:0:0:0:0:45:0%:85:1E0:45:45:18:27:45 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:25 0/0:0:0:0:0:29:0%:55:1E0:45:29:21:8:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:46 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:68:0%:99:1E0:44:68:31:37:69 0/0:0:0:0:0:53:0%:99:1E0:42:53:21:32:53 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:24 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:51 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:41 0/0:0:0:0:0:52:0%:96:1E0:43:52:28:24:55 0/0:0:0:0:0:49:0%:93:1E0:39:49:19:30:51 0/0:0:0:0:0:50:0%:92:1E0:41:50:23:27:51 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:43 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:27:20:50 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:45 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:52:0%:96:1E0:39:52:27:25:54 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:45 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:33 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:41 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:43 0/0:0:0:0:0:39:0%:74:1E0:46:39:14:25:39 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:38 0/0:0:0:0:0:54:0%:99:1E0:43:54:24:30:54 0/0:0:0:0:0:62:0%:99:1E0:43:62:33:29:63 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 MTB_anc 3918333 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|mce4A_Rv3499c|gene3572|transcript|Transcript_gene3572|Coding|1/1|c.868C>T|p.Leu290Phe|868/1203|868/1203|290/400||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3918333G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.3918333G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:62:0%:99:1E0:46:62:33:29:63 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:16:0%:29:1E0:42:16:7:9:17 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:0:0:0:0:39:0%:74:1E0:51:39:21:18:39 0/0:0:0:0:0:28:0%:51:1E0:50:28:8:20:28 0/0:0:0:0:0:31:0%:59:1E0:48:31:12:19:31 0/0:0:0:0:0:35:0%:67:1E0:49:35:15:20:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:41 0/0:0:0:0:0:19:0%:37:1E0:55:19:9:10:19 0/0:0:0:0:0:40:0%:74:1E0:45:40:27:13:40 0/0:0:0:0:0:13:0%:25:1E0:43:13:5:8:14 0/0:0:0:0:0:43:0%:82:1E0:48:43:26:17:43 0/0:0:0:0:0:29:0%:55:1E0:50:29:12:17:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:23 0/0:0:0:0:0:16:0%:29:1E0:51:16:9:7:16 0/0:0:0:0:0:19:0%:37:1E0:49:19:13:6:21 0/0:0:0:0:0:60:0%:99:1E0:44:60:32:28:60 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:37 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:15:0%:29:1E0:48:15:7:8:16 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:22 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:34 0/0:0:0:0:0:24:0%:44:1E0:46:24:18:6:25 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:50:0%:92:1E0:47:50:20:30:51 0/0:0:0:0:0:50:0%:92:1E0:47:50:28:22:51 0/0:0:0:0:0:40:0%:74:1E0:48:40:15:25:42 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:44:0%:81:1E0:48:44:25:19:44 0/0:0:0:0:0:18:0%:32:1E0:43:18:13:5:19 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:60:1:1:0:21:4.76%:31:5E-1:47:20:11:9:21 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:32 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:18 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:35 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:39:0%:74:1E0:48:39:22:17:39 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:39 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:48:0%:89:1E0:49:48:32:16:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:45 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:22:8:30 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:53:0%:99:1E0:48:53:33:20:53 0/0:0:0:0:0:19:0%:37:1E0:50:19:7:12:19 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:14:0%:25:1E0:56:14:10:4:14 0/0:38:1:1:0:26:3.85%:38:5E-1:47:25:14:11:26 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:53:30:11:19:30 0/0:0:0:0:0:25:0%:48:1E0:48:25:6:19:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:18:18:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:15:0%:29:1E0:43:15:4:11:17 0/0:0:0:0:0:28:0%:51:1E0:48:28:7:21:28 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:21:0%:40:1E0:47:21:6:15:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:34 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:19:0%:37:1E0:52:19:12:7:19 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:51:21:9:12:21 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:33 0/0:0:0:0:0:22:0%:40:1E0:50:22:7:15:22 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:22:0%:40:1E0:50:22:6:16:22 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:43 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:43 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:12:7:19 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:29:12:41 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:21 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:27 0/0:0:0:0:0:21:0%:40:1E0:45:21:14:7:21 0/0:0:0:0:0:26:0%:47:1E0:52:26:17:9:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:9:16:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:45:0%:85:1E0:39:45:20:25:46 0/0:0:0:0:0:40:0%:74:1E0:41:40:17:23:40 0/0:0:0:0:0:34:0%:62:1E0:46:34:21:13:34 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:55:0%:99:1E0:43:55:24:31:55 0/0:0:0:0:0:45:0%:85:1E0:44:45:20:25:45 1/1:47:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:54 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:51 0/0:0:0:0:0:48:0%:89:1E0:41:48:20:28:49 0/0:0:0:0:0:60:0%:99:1E0:41:60:32:28:61 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:41 0/0:0:0:0:0:55:0%:99:1E0:43:55:25:30:56 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:38 0/0:0:0:0:0:49:0%:93:1E0:45:49:30:19:50 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:40 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:47 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:43 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:56:0%:99:1E0:40:56:32:24:59 0/0:0:0:0:0:54:0%:99:1E0:44:54:33:21:55 0/0:0:0:0:0:42:0%:77:1E0:46:42:14:28:42 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:41 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:47 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:41 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:43 0/0:0:0:0:0:60:0%:99:1E0:43:60:32:28:60 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:41 MTB_anc 3922380 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|fdxD_Rv3503c-fadE26_Rv3504|gene3576-gene3577|intergenic_region|gene3576-gene3577|||n.3922380G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:54:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:51:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:51:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:51:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:49:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:19:10:9:20:95%:99:2.8292E-11:0:0:0:0:21 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:52:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:50:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:70:33:37:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:40:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:63:40:23:63:100%:99:1.657E-37:0:0:0:0:63 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:47:28:19:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 3922836 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|fadE26_Rv3504|gene3577|transcript|Transcript_gene3577|Coding|1/1|c.366C>T|p.Asp122Asp|366/1203|366/1203|122/400||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3922836C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3922836C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:53:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:63:27:36:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:58:22:36:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:63:33:30:63:100%:99:1.657E-37:0:0:0:0:65 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:47:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:62:24:38:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 3925733 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|fadD17_Rv3506|gene3579|transcript|Transcript_gene3579|Coding|1/1|c.844T>G|p.Phe282Val|844/1509|844/1509|282/502||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3925733T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3925733T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:65:37:28:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:52:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:25:12:13:26:96.15%:99:5.4444E-14:37:1:0:1:26 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:48:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:53:34:19:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:41:31:10:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:68:33:35:68:100%:99:1.6809E-40:0:0:0:0:69 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:61:30:31:61:100%:99:2.609E-36:0:0:0:0:61 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:53:24:29:54:98.15%:99:2.2126E-30:32:1:1:0:55 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 3927224 . TCGG T . PASS AC=43;AF=0.169;AN=254;ANN=T|inframe_deletion|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.667_669delGGC|p.Gly223del|667/4146|667/4146|223/1381||INFO_REALIGN_3_PRIME,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3927225_3927227delCGG||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3927225_3927227delCGG||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:16:0%:29:1E0:39:16:5:11:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:19:7:12:21:90.48%:93:4.7003E-10:33:2:1:1:22 0/1:40:6:2:4:8:75%:24:3.4965E-3:34:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:12 0/0:0:0:0:0:17:0%:33:1E0:35:17:3:14:18 0/0:0:0:0:0:11:0%:22:1E0:39:11:1:10:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:20:0%:36:1E0:38:20:5:15:22 0/0:0:0:0:0:7:0%:14:1E0:41:7:3:4:7 0/0:0:0:0:0:18:0%:32:1E0:36:18:3:15:19 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 0/0:0:0:0:0:15:0%:29:1E0:39:15:4:11:16 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:7:2:5:10:70%:28:1.548E-3:43:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:15:0%:29:1E0:35:15:5:10:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:17 0/0:0:0:0:0:13:0%:25:1E0:38:13:6:7:15 1/1:31:12:4:8:10:92.31%:58:1.3461E-6:33:1:1:0:13 0/0:0:0:0:0:11:0%:22:1E0:38:11:2:9:11 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:11 0/1:32:17:6:11:16:89.47%:82:5.9414E-9:38:2:0:2:19 0/0:0:0:0:0:17:0%:33:1E0:40:17:5:12:18 0/0:0:0:0:0:9:0%:18:1E0:38:9:3:6:9 0/0:0:0:0:0:14:0%:25:1E0:40:14:6:8:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:42:7:2:5:7 0/0:0:0:0:0:20:0%:36:1E0:38:20:10:10:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:6:16:23 0/0:0:0:0:0:14:0%:25:1E0:39:14:8:6:15 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:9 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:19 0/0:0:0:0:0:12:0%:21:1E0:35:12:4:8:14 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:13 0/0:0:0:0:0:9:0%:18:1E0:39:9:5:4:9 0/0:0:0:0:0:8:0%:14:1E0:37:8:4:4:8 0/1:35:11:1:10:14:78.57%:47:1.6951E-5:31:3:1:2:14 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:13 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:12 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:25:0%:48:1E0:37:25:8:17:28 0/0:0:0:0:0:12:0%:21:1E0:40:12:4:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:15 0/0:0:0:0:0:15:0%:29:1E0:37:15:10:5:17 0/0:0:0:0:0:7:0%:14:1E0:41:7:6:1:7 0/0:0:0:0:0:12:0%:21:1E0:33:12:2:10:12 0/0:0:0:0:0:12:0%:21:1E0:34:12:5:7:13 0/0:0:0:0:0:18:0%:32:1E0:38:18:8:10:20 1/1:35:15:5:10:15:93.75%:75:2.8282E-8:38:1:0:1:16 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:23 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:14 1/1:41:9:3:6:10:90%:42:5.9538E-5:34:1:1:0:10 0/1:38:11:4:7:13:78.57%:47:1.6951E-5:33:3:1:2:16 0/1:37:17:5:12:20:85%:78:1.2848E-8:33:3:1:2:20 1/1:35:13:3:10:12:92.86%:64:3.7391E-7:34:1:0:1:14 0/1:35:12:3:9:13:85.71%:55:2.9913E-6:35:2:1:1:14 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:14 0/1:38:7:2:5:8:77.78%:29:1.1312E-3:35:2:0:2:9 0/0:0:0:0:0:9:0%:18:1E0:39:9:3:6:10 0/1:40:13:2:11:15:86.67%:60:8.7675E-7:33:2:1:1:15 1/1:36:18:6:12:17:94.74%:92:5.6585E-10:37:1:1:0:20 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:19 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:18 0/0:0:0:0:0:8:0%:14:1E0:38:8:6:2:9 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:15 0/0:0:0:0:0:10:0%:17:1E0:37:10:5:5:11 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:15 1/1:39:10:3:7:10:90.91%:47:1.7011E-5:33:1:0:1:11 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:10 0/0:0:0:0:0:11:0%:22:1E0:38:11:4:7:11 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 0/0:0:0:0:0:15:0%:29:1E0:35:15:4:11:17 0/0:0:0:0:0:13:0%:25:1E0:41:13:5:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:38:7:3:4:7 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:10 0/1:38:12:5:7:14:85.71%:55:2.9913E-6:35:2:1:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:20:0%:36:1E0:37:20:6:14:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:24:0%:44:1E0:38:24:7:17:25 0/0:0:0:0:0:9:0%:18:1E0:41:9:5:4:9 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:11 0/0:0:0:0:0:14:0%:25:1E0:42:14:8:6:16 0/1:37:12:3:9:16:75%:50:8.0605E-6:34:4:0:4:16 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:13:0%:25:1E0:39:13:3:10:14 0/0:0:0:0:0:21:0%:40:1E0:35:21:6:15:22 0/1:40:11:1:10:13:84.62%:49:1.0096E-5:33:2:0:2:13 0/0:0:0:0:0:20:0%:36:1E0:35:20:5:15:21 0/0:0:0:0:0:11:0%:22:1E0:39:11:6:5:11 0/0:0:0:0:0:14:0%:25:1E0:38:14:4:10:15 0/0:0:0:0:0:13:0%:25:1E0:34:13:6:7:13 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:13 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:13:15:29 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:15 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:20 0/0:0:0:0:0:14:0%:25:1E0:36:14:6:8:15 0/0:37:1:1:0:21:4.76%:31:5E-1:36:20:7:13:22 0/0:38:1:1:0:15:6.67%:21:5E-1:34:14:3:11:18 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:19 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:21 1/1:35:14:5:9:13:93.33%:69:1.0315E-7:34:1:0:1:15 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:15 0/0:0:0:0:0:13:0%:25:1E0:38:13:2:11:14 0/1:36:24:11:13:25:88.89%:99:2.0853E-12:32:3:0:3:27 0/0:0:0:0:0:14:0%:25:1E0:34:14:4:10:15 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:35:8:0:8:9 0/0:0:0:0:0:14:0%:25:1E0:35:14:3:11:15 0/0:0:0:0:0:7:0%:14:1E0:34:7:1:6:8 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:9 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:11 1/1:34:11:3:8:11:91.67%:53:4.8074E-6:38:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:41:11:4:7:12:84.62%:49:1.0096E-5:35:2:0:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:35:8:1:7:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:3:3:8:75%:24:3.4965E-3:38:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:14 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 0/0:0:0:0:0:8:0%:14:1E0:39:8:2:6:9 0/0:0:0:0:0:16:0%:29:1E0:35:16:4:12:16 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:12 1/1:36:13:2:11:14:92.86%:64:3.7391E-7:38:1:0:1:14 1/1:37:24:10:14:25:92.31%:99:7.6222E-13:32:2:0:2:26 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:0:0:0:0:9:0%:18:1E0:33:9:0:9:9 MTB_anc 3927694 . ACCGGCGGCGCGGCCGGCGCCGGCGGAGCCGCAGGCGCTCGCGGGGCTCTCACCAGCGGCGGCCTAGCCGGCGGCGTCGGGGCCGGCGGCACCGGCGGCC A . PASS AC=1;AF=3.472e-03;AN=288;ANN=A|disruptive_inframe_deletion|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.1134_1232delCGCGGCCGGCGCCGGCGGAGCCGCAGGCGCTCGCGGGGCTCTCACCAGCGGCGGCCTAGCCGGCGGCGTCGGGGCCGGCGGCACCGGCGGCCCCGGCGG|p.Ala379_Gly411del|1134/4146|1134/4146|378/1381||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3927695_3927793delCCGGCGGCGCGGCCGGCGCCGGCGGAGCCGCAGGCGCTCGCGGGGCTCTCACCAGCGGCGGCCTAGCCGGCGGCGTCGGGGCCGGCGGCACCGGCGGCC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3927695_3927793delCCGGCGGCGCGGCCGGCGCCGGCGGAGCCGCAGGCGCTCGCGGGGCTCTCACCAGCGGCGGCCTAGCCGGCGGCGTCGGGGCCGGCGGCACCGGCGGCC||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:24:0%:44:1E0:39:24:9:15:25 0/0:0:0:0:0:11:0%:22:1E0:38:11:6:5:11 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:29 0/0:0:0:0:0:10:0%:17:1E0:34:10:6:4:10 0/0:0:0:0:0:19:0%:37:1E0:39:19:8:11:21 0/0:0:0:0:0:10:0%:17:1E0:38:10:4:6:10 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:21 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:14 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:23 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:17 0/0:0:0:0:0:22:0%:40:1E0:37:22:15:7:22 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:22:0%:40:1E0:34:22:7:15:23 0/0:0:0:0:0:14:0%:25:1E0:34:14:8:6:14 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:14 0/0:0:0:0:0:7:0%:14:1E0:40:7:3:4:9 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:39:9:2:7:9 0/0:0:0:0:0:17:0%:33:1E0:36:17:6:11:18 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:26 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:7 0/0:0:0:0:0:15:0%:29:1E0:43:15:10:5:15 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:30 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:16 0/0:0:0:0:0:11:0%:22:1E0:40:11:6:5:12 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:26 0/0:0:0:0:0:10:0%:17:1E0:38:10:4:6:10 0/0:0:0:0:0:29:0%:51:1E0:37:28:7:21:31 0/0:0:0:0:0:24:0%:44:1E0:37:24:11:13:25 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:22 0/0:0:0:0:0:13:0%:25:1E0:41:13:6:7:13 0/0:0:0:0:0:10:0%:17:1E0:39:10:7:3:10 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:16 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 0/0:0:0:0:0:14:0%:25:1E0:34:14:4:10:14 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:23 0/0:0:0:0:0:14:0%:25:1E0:39:14:9:5:14 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:34 0/0:0:0:0:0:18:0%:32:1E0:36:18:8:10:20 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:16 0/0:0:0:0:0:15:0%:29:1E0:35:15:2:13:16 0/0:0:0:0:0:11:0%:22:1E0:36:11:7:4:12 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:23 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:29 0/0:0:0:0:0:24:0%:44:1E0:37:24:14:10:25 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:18 0/0:0:0:0:0:19:0%:37:1E0:40:19:6:13:21 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:11 0/0:0:0:0:0:11:0%:22:1E0:40:11:6:5:11 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:34 0/0:0:0:0:0:8:0%:14:1E0:48:8:5:3:8 0/0:0:0:0:0:7:0%:14:1E0:38:7:5:2:7 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:22 0/0:0:0:0:0:24:0%:44:1E0:36:24:7:17:25 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:10:0%:17:1E0:32:10:7:3:11 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:15 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:14 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:23 0/0:0:0:0:0:22:0%:40:1E0:36:22:13:9:23 0/0:0:0:0:0:13:0%:25:1E0:39:13:8:5:13 0/0:0:0:0:0:20:0%:36:1E0:36:20:13:7:22 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:24 0/0:0:0:0:0:20:0%:36:1E0:40:20:11:9:20 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:14 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:19 0/0:0:0:0:0:10:0%:17:1E0:45:10:3:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:39:13:7:6:13 0/0:0:0:0:0:16:0%:29:1E0:43:16:10:6:16 0/0:0:0:0:0:11:0%:22:1E0:47:11:6:5:11 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:18 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:27 0/0:0:0:0:0:12:0%:21:1E0:36:12:7:5:12 0/0:0:0:0:0:17:0%:33:1E0:35:17:8:9:18 0/0:0:0:0:0:16:0%:29:1E0:47:16:6:10:19 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:15 0/0:0:0:0:0:18:0%:32:1E0:39:18:10:8:18 0/0:0:0:0:0:9:0%:18:1E0:34:9:4:5:10 0/0:0:0:0:0:24:0%:44:1E0:36:24:9:15:26 0/0:0:0:0:0:18:0%:32:1E0:34:18:4:14:20 0/0:0:0:0:0:19:0%:37:1E0:41:19:7:12:22 0/0:0:0:0:0:16:0%:29:1E0:38:16:8:8:17 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:26 0/0:0:0:0:0:15:0%:29:1E0:34:15:2:13:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:13 0/0:0:0:0:0:10:0%:17:1E0:46:10:5:5:10 0/0:0:0:0:0:14:0%:25:1E0:47:14:9:5:16 0/0:0:0:0:0:13:0%:25:1E0:42:13:2:11:13 0/0:0:0:0:0:27:0%:52:1E0:37:27:7:20:30 0/0:0:0:0:0:9:0%:18:1E0:40:9:8:1:9 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:29 0/0:0:0:0:0:11:0%:22:1E0:43:11:5:6:12 0/0:0:0:0:0:16:0%:29:1E0:34:16:8:8:18 0/0:0:0:0:0:14:0%:25:1E0:39:14:8:6:14 0/0:0:0:0:0:19:0%:37:1E0:35:19:11:8:19 0/0:0:0:0:0:25:0%:48:1E0:35:25:15:10:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:8:17:28 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:38 0/0:0:0:0:0:15:0%:29:1E0:34:15:3:12:17 0/0:0:0:0:0:18:0%:32:1E0:35:18:9:9:18 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:17 0/0:0:0:0:0:24:0%:44:1E0:37:23:13:10:24 0/0:0:0:0:0:29:0%:55:1E0:39:29:18:11:29 0/1:39:10:4:6:24:40%:34:3.1821E-4:39:15:10:5:26 0/0:0:0:0:0:46:0%:85:1E0:39:46:16:30:48 0/0:0:0:0:0:28:0%:51:1E0:35:28:15:13:29 0/0:0:0:0:0:44:0%:81:1E0:37:44:19:25:50 0/0:0:0:0:0:14:0%:25:1E0:35:14:8:6:15 0/0:0:0:0:0:26:0%:47:1E0:35:26:11:15:27 0/0:0:0:0:0:24:0%:44:1E0:35:24:8:16:28 0/0:0:0:0:0:19:0%:37:1E0:36:19:6:13:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:24 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:23 0/0:0:0:0:0:21:0%:40:1E0:38:21:11:10:24 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:39:26:8:18:27 0/0:0:0:0:0:18:0%:33:1E0:37:17:6:11:20 0/0:0:0:0:0:10:0%:17:1E0:33:10:4:6:12 0/0:0:0:0:0:13:0%:25:1E0:34:13:9:4:14 0/0:0:0:0:0:13:0%:25:1E0:34:13:5:8:13 0/0:0:0:0:0:20:0%:36:1E0:35:20:11:9:21 0/0:0:0:0:0:26:0%:47:1E0:35:26:14:12:27 0/0:0:0:0:0:22:0%:40:1E0:39:22:14:8:24 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:10 0/0:0:0:0:0:17:0%:33:1E0:40:17:6:11:17 0/0:0:0:0:0:11:0%:22:1E0:34:11:6:5:12 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:16 0/0:0:0:0:0:14:0%:25:1E0:34:14:5:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:20:0%:36:1E0:38:20:11:9:21 0/0:0:0:0:0:17:0%:33:1E0:37:17:12:5:17 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:10:0%:17:1E0:38:10:5:5:10 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:15 0/0:0:0:0:0:9:0%:18:1E0:40:9:5:4:9 0/0:0:0:0:0:14:0%:25:1E0:34:14:5:9:15 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:12 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:22 0/0:0:0:0:0:11:0%:22:1E0:40:11:9:2:11 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:22 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:24 0/0:0:0:0:0:14:0%:25:1E0:42:14:9:5:14 MTB_anc 3927793 . C A . PASS AC=288;AF=1.00;AN=288;ANN=A|missense_variant|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.1225C>A|p.Pro409Thr|1225/4146|1225/4146|409/1381||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3927793C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3927793C>A||||||;HET=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:33:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:35:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:34:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:34:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:23:8:15:24:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:23:7:16:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:32 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:18:8:10:19:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:18:6:12:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:17:8:9:18:94.44%:93:4.2852E-10:0:0:0:0:19 1/1:34:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:37:20:12:8:21:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:41:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:35:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:14:8:6:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:14 1/1:34:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:35:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:36:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:24:9:15:24:100%:99:3.101E-14:0:0:0:0:29 1/1:34:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:35:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:33:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:33:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:32:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 MTB_anc 3928207 . CCCGGCGGGG C . PASS AC=65;AF=0.382;AN=170;ANN=C|disruptive_inframe_deletion|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.1670_1678delGCGGGGCCG|p.Gly557_Ala559del|1670/4146|1670/4146|557/1381||INFO_REALIGN_3_PRIME,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3928208_3928216delCCGGCGGGG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3928208_3928216delCCGGCGGGG||||||;HOM=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:9:1:8:14:64.29%:35:2.8986E-4:37:5:5:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:12:2:10:20:60%:46:2.2548E-5:39:8:2:6:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:40:8:2:6:13:61.54%:30:8.238E-4:36:5:5:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:6:0:6:9:66.67%:23:4.5249E-3:36:3:1:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:6:2:4:15:40%:20:8.4291E-3:40:9:7:2:15 0/1:44:8:2:6:18:44.44%:28:1.4461E-3:36:10:7:3:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:29:1:0:1:8:12.5%:8:5E-1:32:7:4:3:8 0/0:45:4:1:3:11:36.36%:4:4.5113E-2:39:7:6:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:11:2:9:23:45.83%:39:1.1047E-4:35:13:9:4:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:32:5:0:5:15:33.33%:6:2.1073E-2:36:10:6:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:41:7:1:6:13:53.85%:25:2.6087E-3:38:6:2:4:13 0/1:36:7:0:7:14:50%:25:2.8986E-3:37:7:4:3:14 0/1:33:10:1:9:15:62.5%:39:1.2413E-4:39:6:6:0:16 0/0:43:3:1:2:14:21.43%:9:1.1111E-1:37:11:7:4:14 0/1:37:7:0:7:12:58.33%:26:2.2883E-3:37:5:4:1:12 0/1:36:6:0:6:8:75%:24:3.4965E-3:34:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:7:1:6:17:41.18%:24:3.6151E-3:37:10:6:4:18 0/0:33:4:1:3:11:33.33%:4:4.6584E-2:38:8:4:4:12 0/1:31:7:1:6:16:41.18%:24:3.6151E-3:39:10:7:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:8:1:7:14:57.14%:30:9.6618E-4:36:6:2:4:14 0/1:40:6:2:4:11:54.55%:22:6.192E-3:41:5:2:3:11 0/1:42:7:2:5:10:70%:28:1.548E-3:36:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:7:1:6:15:46.67%:25:3.1609E-3:34:8:4:4:15 0/1:35:10:2:8:20:47.62%:36:2.3971E-4:38:11:10:1:22 0/0:34:3:0:3:11:27.27%:7:1.0714E-1:39:8:3:5:13 0/0:35:2:0:2:8:25%:5:2.3333E-1:36:6:2:4:10 0/1:38:8:1:7:17:47.06%:28:1.3389E-3:38:9:5:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:10:2:8:20:50%:37:1.9541E-4:38:9:5:4:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:33:8:1:7:14:53.33%:29:1.0995E-3:36:7:3:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:6:1:5:11:50%:21:6.865E-3:36:6:3:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:41:6:3:3:11:50%:21:6.865E-3:41:6:5:1:13 0/1:43:9:2:7:17:52.94%:33:4.6348E-4:36:8:3:5:17 0/1:40:8:1:7:12:66.67%:31:6.7304E-4:37:4:1:3:13 0/1:37:9:0:9:15:60%:34:3.4983E-4:35:6:5:1:15 0/0:37:4:2:2:10:40%:3:4.3344E-2:36:6:4:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:12:1:11:16:70.59%:49:1.1285E-5:35:5:3:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:31:2:0:2:8:25%:5:2.3333E-1:37:6:4:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:44:6:2:4:11:54.55%:22:6.192E-3:35:5:3:2:11 0/0:40:5:0:5:15:33.33%:6:2.1073E-2:36:10:10:0:15 0/1:34:10:0:10:16:62.5%:39:1.2413E-4:35:6:2:4:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:30:3:1:2:9:33.33%:4:1.0294E-1:35:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:46:4:1:3:10:40%:3:4.3344E-2:35:6:5:1:10 0/0:28:5:0:5:9:45.45%:3:1.7544E-2:34:6:4:2:11 0/0:45:3:0:3:13:23.08%:9:1.1E-1:37:10:6:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:42:9:0:9:16:56.25%:33:4.0786E-4:37:7:6:1:16 0/0:35:3:0:3:10:30%:4:1.0526E-1:36:7:5:2:10 0/1:33:8:1:7:16:44.44%:28:1.4461E-3:35:10:6:4:18 0/0:37:4:0:4:11:36.36%:4:4.5113E-2:33:7:6:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:39:6:0:6:11:54.55%:22:6.192E-3:37:5:2:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:7:1:6:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:34:15:0:15:29:51.72%:55:2.6068E-6:35:14:8:6:29 0/0:45:3:0:3:9:33.33%:4:1.0294E-1:37:6:3:3:9 0/1:36:19:3:16:25:76%:82:5.8245E-9:37:6:3:3:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 0/1:42:8:1:7:11:72.73%:32:5.16E-4:34:3:3:0:11 0/1:38:14:2:12:24:58.33%:53:4.0663E-6:35:10:8:2:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:34:11:0:11:18:61.11%:42:5.2969E-5:36:7:5:2:19 0/1:42:7:0:7:13:53.85%:25:2.6087E-3:34:6:3:3:13 0/1:36:6:0:6:11:54.55%:22:6.192E-3:35:5:4:1:11 0/1:33:7:0:7:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:11:0:11:16:68.75%:44:3.3854E-5:39:5:5:0:16 0/1:31:15:2:13:16:83.33%:68:1.4655E-7:38:3:1:2:18 0/1:35:10:1:9:16:62.5%:39:1.2413E-4:37:6:4:2:16 0/1:39:9:1:8:22:40.91%:31:7.0165E-4:35:13:10:3:22 0/1:33:7:0:7:12:53.85%:25:2.6087E-3:37:6:3:3:14 0/1:42:9:2:7:19:47.37%:32:5.667E-4:36:10:5:5:20 0/0:36:5:0:5:11:45.45%:3:1.7544E-2:34:6:4:2:11 0/1:34:13:0:13:27:44.83%:46:2.1506E-5:36:16:11:5:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:32:5:0:5:13:38.46%:3:1.8634E-2:34:7:5:2:15 0/1:38:10:2:8:16:55.56%:38:1.4831E-4:35:7:6:1:18 0/1:41:14:5:9:20:70%:57:1.6702E-6:34:6:4:2:20 0/1:36:7:1:6:15:46.67%:25:3.1609E-3:33:8:6:2:16 0/1:36:13:1:12:16:76.47%:55:2.5647E-6:34:4:3:1:18 0/1:38:6:0:6:14:42.86%:20:7.971E-3:37:8:6:2:14 0/1:40:8:0:8:19:42.11%:28:1.5455E-3:36:11:8:3:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:42:7:1:6:16:43.75%:24:3.3988E-3:34:9:7:2:16 0/0:22:4:0:4:10:33.33%:4:4.6584E-2:32:8:6:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:10:0:10:15:62.5%:39:1.2413E-4:35:6:4:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:6:1:5:11:50%:21:6.865E-3:32:6:4:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:7:0:7:14:50%:25:2.8986E-3:36:7:5:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:12:0:12:15:80%:52:5.2605E-6:35:3:2:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:31:7:0:7:13:50%:25:2.8986E-3:35:7:4:3:14 0/1:41:7:1:6:12:58.33%:26:2.2883E-3:37:5:3:2:12 0/1:35:9:1:8:13:64.29%:35:2.8986E-4:35:5:5:0:14 0/1:43:11:0:11:14:78.57%:47:1.6951E-5:35:3:3:0:14 0/1:45:9:0:9:13:69.23%:36:2.2883E-4:41:4:3:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3928265 . CCGGCGGTACCGGCGGTAACGGCGGCAACGGCGGCAA CCGGCGGCAACGGCGGCAA,C . PASS AC=53,1;AF=0.510,9.615e-03;AN=104;set=variant GT:ABQ:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:1:5:10:60%:22:5.418E-3:36:4:1:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:2:8:13:76.92%:42:5.3843E-5:38:3:0:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:27:1:0:7:14.29%:8:5E-1:36:6:2:4:7 0/1:35:2:4:10:60%:22:5.418E-3:38:4:2:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:1:6:13:53.85%:25:2.6087E-3:36:6:3:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:30:0:6:7:75%:24:3.4965E-3:35:2:1:1:8 0/1:34:4:2:8:75%:24:3.4965E-3:35:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:0:7:8:87.5%:31:6.993E-4:38:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:0:6:8:75%:24:3.4965E-3:36:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:1:6:9:77.78%:29:1.1312E-3:36:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:4:12:18:88.89%:76:2.0936E-8:38:2:0:2:18 1/1:39:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:28:1:8:13:60%:34:3.4983E-4:38:6:2:4:15 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:32:2:8:13:71.43%:42:5.3843E-5:36:3:0:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:32:0:6:8:66.67%:23:4.5249E-3:36:3:1:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:36:3:7:10:90.91%:47:1.7011E-5:38:1:0:1:11 0/1:36:1:6:8:87.5%:31:6.993E-4:38:1:1:0:8 0/1:36:0:7:9:87.5%:31:6.993E-4:38:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:36:1:5:12:50%:21:6.865E-3:36:6:1:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:0:6:8:75%:24:3.4965E-3:35:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:2 0/2:36:0:6:9:66.67%:23:4.5249E-3:38:3:1:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:0:6:8:75%:24:3.4965E-3:38:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:37:0:5:16:31.25%:6:2.1691E-2:36:11:0:11:16 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:2:9:18:61.11%:42:5.2969E-5:37:7:1:6:18 ./.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:32:1:6:9:70%:28:1.548E-3:37:3:0:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:34:2:5:15:46.67%:25:3.1609E-3:37:8:1:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:33:0:11:12:84.62%:49:1.0096E-5:37:2:1:1:13 0/1:31:1:8:10:81.82%:39:1.1057E-4:38:2:0:2:11 0/1:29:0:6:9:60%:22:5.418E-3:37:4:0:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:1:10:15:73.33%:46:2.4988E-5:37:4:0:4:15 0/1:32:1:7:16:47.06%:28:1.3389E-3:37:9:1:8:17 0/0:35:0:4:10:40%:3:4.3344E-2:35:6:1:5:10 0/1:33:1:10:14:73.33%:46:2.4988E-5:36:4:1:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:5:6:14:78.57%:47:1.6951E-5:37:3:0:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:33:0:9:16:52.94%:33:4.6348E-4:36:8:0:8:17 ./.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:1:8:10:90%:42:5.9538E-5:31:1:0:1:10 1/1:35:4:9:14:92.86%:64:3.7391E-7:38:1:0:1:14 1/1:33:5:10:14:93.75%:75:2.8282E-8:38:1:1:0:17 0/1:36:2:10:14:85.71%:55:2.9913E-6:37:2:0:2:14 0/1:35:1:12:16:81.25%:57:1.6121E-6:35:3:0:3:16 0/1:33:1:8:11:81.82%:39:1.1057E-4:35:2:0:2:11 0/0:36:1:4:11:45.45%:3:1.7544E-2:37:6:0:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:36:2:4:10:60%:22:5.418E-3:35:4:0:4:10 0/1:32:0:7:9:70%:28:1.548E-3:37:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:1:7:8:88.89%:36:2.0568E-4:38:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:0:7:12:58.33%:26:2.2883E-3:37:5:0:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:1:7:10:80%:34:3.5723E-4:38:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:33:1:9:11:83.33%:44:3.3652E-5:38:2:0:2:12 0/1:36:1:5:8:75%:24:3.4965E-3:37:2:0:2:8 0/1:35:1:6:10:70%:28:1.548E-3:38:3:0:3:10 0/1:36:2:9:14:78.57%:47:1.6951E-5:36:3:0:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3928272 . T C . PASS AC=26;AF=1.00;AN=26;ANN=C|synonymous_variant|LOW|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.1704T>C|p.Gly568Gly|1704/4146|1704/4146|568/1381||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3928272T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3928272T>C||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:5:1:4:15:100%:24:3.9683E-3:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:5:1:4:8:100%:24:3.9683E-3:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:6:2:4:13:100%:29:1.0823E-3:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:5:1:4:11:100%:24:3.9683E-3:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:5:1:4:8:100%:24:3.9683E-3:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:0:10:15:100%:52:5.4125E-6:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:1:6:18:100%:35:2.9138E-4:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:1:6:14:100%:35:2.9138E-4:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 1/1:35:8:0:8:16:100%:41:7.77E-5:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 1/1:37:5:2:3:7:100%:24:3.9683E-3:0:0:0:0:7 1/1:38:6:0:6:14:100%:29:1.0823E-3:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:36:6:0:6:11:100%:29:1.0823E-3:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:5:1:4:7:100%:24:3.9683E-3:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3928274 . C A . PASS AC=24;AF=1.00;AN=24;ANN=A|missense_variant|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.1706C>A|p.Thr569Asn|1706/4146|1706/4146|569/1381||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3928274C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3928274C>A||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:5:1:4:15:100%:24:3.9683E-3:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:5:1:4:8:100%:24:3.9683E-3:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:6:2:4:13:100%:29:1.0823E-3:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:5:1:4:11:100%:24:3.9683E-3:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:0:10:15:100%:52:5.4125E-6:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:1:6:18:100%:35:2.9138E-4:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:6:1:5:13:100%:29:1.0823E-3:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 1/1:36:8:0:8:16:100%:41:7.77E-5:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 1/1:36:5:2:3:7:100%:24:3.9683E-3:0:0:0:0:7 1/1:38:6:0:6:14:100%:29:1.0823E-3:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:36:6:0:6:11:100%:29:1.0823E-3:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:6:1:5:8:100%:29:1.0823E-3:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3928281 . T C . PASS AC=16;AF=0.800;AN=20;ANN=C|synonymous_variant|LOW|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.1713T>C|p.Gly571Gly|1713/4146|1713/4146|571/1381||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3928281T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3928281T>C||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:5:1:4:9:83.33%:21:7.5758E-3:37:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:6:2:4:13:100%:29:1.0823E-3:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:5:1:4:11:100%:24:3.9683E-3:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:0:9:15:90%:42:5.9538E-5:35:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:1:6:22:63.64%:27:1.935E-3:34:4:2:2:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:1:5:15:75%:24:3.4965E-3:38:2:0:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 0/1:36:7:0:7:17:77.78%:29:1.1312E-3:34:2:0:2:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:37:6:0:6:14:100%:29:1.0823E-3:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:36:5:0:5:10:100%:24:3.9683E-3:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:5:1:4:7:100%:24:3.9683E-3:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3928308 . T C . PASS AC=145;AF=0.942;AN=154;ANN=C|synonymous_variant|LOW|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.1740T>C|p.Gly580Gly|1740/4146|1740/4146|580/1381||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3928308T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3928308T>C||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 0/1:36:6:2:4:7:85.71%:26:2.331E-3:33:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:9:5:4:10:90%:42:5.9538E-5:33:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:36:20:5:15:23:86.96%:95:3.1579E-10:32:3:2:1:23 1/1:36:10:3:7:11:90.91%:47:1.7011E-5:35:1:1:0:12 1/1:42:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:34:8:4:4:9:88.89%:36:2.0568E-4:32:1:1:0:10 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 0/1:39:6:2:4:7:85.71%:26:2.331E-3:33:1:1:0:7 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:36:8:0:8:9:88.89%:36:2.0568E-4:33:1:1:0:9 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:3:7:11:90.91%:47:1.7011E-5:34:1:1:0:12 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:9:2:7:10:90%:46:2.0568E-5:0:0:0:0:10 1/1:37:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:8:3:5:9:88.89%:36:2.0568E-4:35:1:1:0:11 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:1:13:15:93.33%:69:1.0315E-7:33:1:1:0:15 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 0/1:35:7:3:4:8:87.5%:31:6.993E-4:35:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:7:3:4:9:77.78%:29:1.1312E-3:34:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:7:1:6:8:87.5%:31:6.993E-4:33:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3928784 . C CCGGCGGGGCCGGCGGTAA . PASS AC=80;AF=0.308;AN=260;ANN=CCGGCGGGGCCGGCGGTAA|disruptive_inframe_insertion|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.2231_2232insTAACGGCGGGGCCGGCGG|p.Gly744_Gln745insAsnGlyGlyAlaGlyGly|2232/4146|2232/4146|744/1381||INFO_REALIGN_3_PRIME,CCGGCGGGGCCGGCGGTAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3928784_3928785insCGGCGGGGCCGGCGGTAA||||||,CCGGCGGGGCCGGCGGTAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3928784_3928785insCGGCGGGGCCGGCGGTAA||||||;HOM=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:39:9:0:9:21:42.86%:31:6.592E-4:37:12:8:4:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:40:9:0:9:26:34.62%:30:8.4928E-4:40:17:14:3:26 0/0:49:2:1:1:8:25%:5:2.3333E-1:36:6:3:3:8 0/0:35:3:0:3:11:27.27%:4:1.0526E-1:37:7:6:1:13 0/1:43:6:1:5:13:46.15%:21:7.4534E-3:36:7:4:3:13 0/1:44:6:1:5:11:54.55%:22:6.192E-3:35:5:5:0:12 0/0:30:4:0:4:12:30.77%:6:4.7826E-2:37:9:6:3:13 0/1:43:6:0:6:12:50%:21:6.865E-3:35:6:4:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:60:3:2:1:11:27.27%:7:1.0714E-1:36:8:6:2:11 0/1:34:8:0:8:13:57.14%:30:9.6618E-4:34:6:3:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:42:9:2:7:24:37.5%:31:7.7962E-4:37:15:10:5:25 0/0:37:3:0:3:15:20%:11:1.1207E-1:38:12:10:2:15 0/0:36:5:0:5:16:31.25%:6:2.1691E-2:40:11:6:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:38:1:0:1:14:7.14%:18:5E-1:38:12:9:3:14 0/0:42:4:0:4:10:36.36%:4:4.5113E-2:35:7:5:2:12 0/1:43:12:1:11:25:48%:43:4.2836E-5:38:13:7:6:25 0/1:39:6:0:6:13:46.15%:21:7.4534E-3:40:7:3:4:13 0/1:39:9:1:8:15:60%:34:3.4983E-4:36:6:4:2:15 0/1:40:11:2:9:18:57.89%:42:6.2811E-5:37:8:3:5:20 0/1:36:7:0:7:14:46.67%:25:3.1609E-3:44:8:8:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:6:0:6:20:30%:20:9.828E-3:35:13:9:4:21 0/1:39:6:0:6:10:60%:22:5.418E-3:42:4:3:1:11 0/1:41:8:1:7:18:44.44%:28:1.4461E-3:37:10:6:4:19 0/1:34:11:1:10:19:55%:41:7.2653E-5:39:9:6:3:20 0/1:40:11:0:11:24:47.83%:39:1.0135E-4:41:12:6:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:6:0:6:11:54.55%:22:5.418E-3:36:4:4:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:36:7:0:7:19:36.84%:23:3.9926E-3:38:12:8:4:19 0/1:36:6:0:6:20:30%:20:9.5308E-3:36:12:8:4:20 0/1:41:11:1:10:24:44%:39:1.1047E-4:38:13:9:4:26 0/1:42:10:1:9:25:40%:35:2.9985E-4:39:14:12:2:25 0/1:38:16:2:14:26:59.26%:62:6.1806E-7:37:11:10:1:27 0/1:40:12:3:9:24:50%:44:3.8815E-5:39:12:8:4:24 0/0:37:2:0:2:14:14.29%:12:2.4074E-1:38:12:8:4:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:7:1:6:10:58.33%:26:2.2883E-3:37:5:4:1:13 0/0:48:4:0:4:16:25%:8:5.0612E-2:37:12:8:4:16 0/1:43:6:1:5:15:40%:20:8.4291E-3:37:9:7:2:16 0/1:39:10:0:10:21:47.62%:36:2.1796E-4:39:10:8:2:22 0/1:40:8:2:6:18:44.44%:28:1.4461E-3:36:10:6:4:18 0/0:55:5:1:4:20:25%:10:2.3166E-2:37:14:10:4:21 0/1:42:12:3:9:19:63.16%:47:1.8611E-5:38:7:7:0:19 0/0:37:1:0:1:7:14.29%:8:5E-1:37:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:42:4:1:3:13:30.77%:6:4.7826E-2:37:9:8:1:14 0/1:38:7:1:6:11:63.64%:27:1.935E-3:38:4:3:1:11 0/0:38:2:0:2:8:25%:5:2.3333E-1:37:6:6:0:8 0/1:34:10:1:9:17:52.63%:37:1.9541E-4:38:9:5:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:45:5:1:4:12:41.67%:3:1.8634E-2:37:7:5:2:12 0/0:32:5:0:5:13:38.46%:4:1.9565E-2:40:8:5:3:13 0/1:36:7:1:6:15:43.75%:24:3.3988E-3:37:9:5:4:16 0/1:38:7:1:6:16:43.75%:24:3.3988E-3:40:9:5:4:16 0/0:36:5:1:4:21:23.81%:12:2.3921E-2:36:16:12:4:21 0/1:40:7:1:6:16:43.75%:24:3.3988E-3:38:9:5:4:17 0/1:50:7:1:6:13:53.85%:25:2.6087E-3:37:6:6:0:13 0/1:42:13:4:9:20:65%:51:6.4422E-6:37:7:5:2:20 0/0:36:6:0:6:20:30%:7:1.0098E-2:39:14:10:4:20 0/1:44:8:2:6:14:61.54%:30:8.238E-4:36:5:5:0:14 0/1:37:15:0:15:31:48.39%:55:2.6068E-6:37:14:10:4:32 0/0:38:2:0:2:15:13.33%:12:2.4074E-1:36:12:7:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:43:4:1:3:16:25%:8:5.0612E-2:37:12:12:0:16 0/1:40:7:0:7:25:29.17%:23:4.5803E-3:38:16:11:5:26 0/1:38:9:0:9:18:47.37%:32:5.667E-4:40:10:6:4:20 0/0:48:4:1:3:11:36.36%:4:4.5113E-2:37:7:4:3:12 0/0:42:5:0:5:14:35.71%:4:2.037E-2:39:9:7:2:14 0/0:49:2:1:1:10:20%:7:2.3684E-1:38:8:7:1:10 0/0:37:5:0:5:13:38.46%:4:1.9565E-2:38:8:6:2:13 0/1:41:6:1:5:10:60%:22:5.418E-3:37:4:3:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:39:7:1:6:14:50%:25:2.8986E-3:37:7:4:3:14 0/1:43:8:1:7:14:57.14%:30:9.6618E-4:41:6:4:2:15 0/0:36:5:1:4:12:38.46%:3:1.8634E-2:41:7:4:3:14 0/0:41:4:0:4:12:33.33%:4:4.5113E-2:36:7:2:5:12 0/1:35:9:2:7:21:40.91%:31:7.0165E-4:39:13:8:5:23 0/0:40:5:1:4:15:33.33%:4:2.037E-2:37:9:7:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:49:7:2:5:16:43.75%:24:3.3988E-3:36:9:8:1:16 0/0:42:5:0:5:14:35.71%:4:2.037E-2:37:9:8:1:14 0/0:37:3:1:2:14:21.43%:9:1.1E-1:35:10:10:0:14 0/1:35:11:0:11:18:61.11%:42:5.2969E-5:38:7:5:2:19 0/1:41:9:0:9:15:60%:34:3.4983E-4:37:6:4:2:16 0/1:46:10:1:9:26:38.46%:35:2.9985E-4:37:14:12:2:27 0/1:49:11:4:7:18:61.11%:42:5.2969E-5:37:7:6:1:18 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:35:6:4:2:10 0/1:39:12:1:11:19:60%:46:2.2548E-5:36:8:6:2:20 0/1:38:8:1:7:21:38.1%:27:1.638E-3:37:12:9:3:22 0/1:36:9:1:8:20:45%:32:6.1425E-4:36:11:11:0:20 0/1:42:11:2:9:20:52.38%:40:8.2399E-5:40:10:8:2:22 0/1:33:7:1:6:19:35%:23:4.158E-3:36:13:7:6:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:48:2:1:1:9:22.22%:5:2.3333E-1:37:6:3:3:10 0/0:42:4:0:4:10:40%:3:4.3344E-2:38:6:5:1:10 0/1:51:10:5:5:17:58.82%:39:1.2413E-4:37:6:5:1:18 0/1:46:11:3:8:25:44%:39:1.1933E-4:39:14:9:5:25 0/0:46:5:1:4:21:23.81%:12:2.3921E-2:37:16:11:5:21 0/1:37:7:1:6:18:38.89%:24:3.8123E-3:36:11:7:4:18 0/1:39:16:2:14:30:50%:59:1.0995E-6:41:15:10:5:35 0/1:37:8:2:6:22:36.36%:27:1.8042E-3:38:14:11:3:22 0/1:42:9:3:6:20:42.86%:31:6.592E-4:37:12:9:3:21 0/0:46:5:1:4:13:38.46%:4:1.9565E-2:35:8:5:3:13 0/0:39:3:0:3:17:17.65%:14:1.1364E-1:37:14:7:7:17 0/1:49:7:1:6:23:30.43%:23:4.3101E-3:36:14:9:5:23 0/1:32:10:0:10:21:45.45%:35:2.6061E-4:36:12:9:3:22 0/1:32:6:0:6:17:33.33%:20:9.5308E-3:37:12:7:5:18 0/0:40:5:1:4:17:29.41%:8:2.2239E-2:36:12:9:3:19 0/1:29:6:0:6:9:54.55%:22:6.192E-3:38:5:4:1:11 0/1:36:6:0:6:16:37.5%:20:8.837E-3:36:10:7:3:16 0/1:35:10:0:10:23:43.48%:35:2.8066E-4:38:13:11:2:23 0/1:38:8:1:7:15:53.33%:29:1.0995E-3:37:7:5:2:16 0/1:37:6:1:5:15:40%:20:8.4291E-3:37:9:5:4:17 0/0:41:5:0:5:14:35.71%:4:2.037E-2:37:9:8:1:15 0/0:24:3:0:3:9:30%:4:1.0526E-1:37:7:4:3:10 0/1:37:10:0:10:12:76.92%:42:5.3843E-5:37:3:3:0:13 0/1:33:7:0:7:13:53.85%:25:2.6087E-3:37:6:5:1:13 0/0:36:4:0:4:9:40%:3:4.3344E-2:35:6:3:3:11 0/0:43:3:0:3:9:33.33%:4:1.0294E-1:35:6:3:3:9 0/1:34:6:1:5:18:33.33%:20:9.5308E-3:36:12:9:3:18 0/1:32:9:0:9:16:56.25%:33:4.0786E-4:35:7:5:2:17 0/0:38:4:0:4:10:40%:3:4.3344E-2:36:6:4:2:11 0/0:36:5:0:5:15:33.33%:4:2.037E-2:37:9:8:1:16 0/1:39:7:2:5:10:70%:28:1.548E-3:35:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:45:8:1:7:22:36.36%:27:1.7241E-3:36:13:10:3:22 0/0:41:4:1:3:12:33.33%:4:4.6584E-2:37:8:6:2:12 0/0:35:1:0:1:9:11.11%:11:5E-1:37:8:7:1:9 0/0:48:2:0:2:12:16.67%:10:2.3913E-1:36:10:6:4:14 0/1:46:8:1:7:16:50%:29:1.2236E-3:36:8:6:2:17 0/1:42:6:1:5:15:40%:20:8.4291E-3:37:9:7:2:15 0/1:45:6:1:5:13:46.15%:21:7.4534E-3:37:7:6:1:13 0/0:37:2:0:2:11:18.18%:7:2.3684E-1:36:8:7:1:11 0/1:43:9:2:7:21:42.86%:31:6.592E-4:37:12:10:2:21 0/0:37:5:0:5:12:41.67%:3:1.7544E-2:36:6:5:1:12 0/0:37:2:0:2:10:20%:5:2.3333E-1:37:6:5:1:11 0/0:45:5:0:5:16:31.25%:6:2.1691E-2:39:11:10:1:16 0/1:40:8:1:7:13:61.54%:30:8.238E-4:35:5:3:2:13 0/1:36:12:0:12:23:52.17%:44:3.4748E-5:37:11:10:1:23 0/0:45:3:0:3:10:30%:4:1.0294E-1:41:6:4:2:10 MTB_anc 3928892 . G A . PASS AC=288;AF=1.00;AN=288;ANN=A|missense_variant|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.2324G>A|p.Gly775Asp|2324/4146|2324/4146|775/1381||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3928892G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3928892G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:25:4:21:25:100%:99:7.9107E-15:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:39:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:44:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:34:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:37:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:32:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:33:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:34:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:33:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 MTB_anc 3929089 . GACGGCGGCA G . PASS AC=249;AF=0.859;AN=290;ANN=G|disruptive_inframe_deletion|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.2534_2542delGCGGCAACG|p.Gly845_Asn847del|2534/4146|2534/4146|845/1381||INFO_REALIGN_3_PRIME,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3929090_3929098delACGGCGGCA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3929090_3929098delACGGCGGCA||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:21:15:6:24:84%:97:1.8789E-10:33:4:0:4:25 1/1:48:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:24:9:15:23:96%:99:2.0568E-13:35:1:0:1:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:20:10:10:19:95.24%:99:4.0873E-11:35:1:1:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:47:17:6:11:18:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:39:14:5:9:14:93.33%:69:1.0315E-7:38:1:1:0:15 1/1:34:17:9:8:15:94.44%:86:2.0936E-9:60:1:0:1:18 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:14:8:6:14:93.33%:69:1.0315E-7:30:1:1:0:15 1/1:39:29:13:16:29:93.55%:99:1.1344E-15:28:2:2:0:31 0/1:43:7:2:5:8:87.5%:31:6.993E-4:33:1:1:0:9 1/1:37:30:12:18:31:90.91%:99:9.89E-16:42:3:1:2:34 1/1:36:16:9:7:16:94.12%:81:7.7134E-9:33:1:0:1:17 0/1:38:13:7:6:14:86.67%:60:8.7675E-7:36:2:2:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:8:6:2:9:88.89%:36:2.0568E-4:24:1:1:0:10 0/1:36:9:4:5:11:81.82%:39:1.1057E-4:32:2:2:0:11 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 0/1:40:7:3:4:8:87.5%:31:6.993E-4:33:1:0:1:9 1/1:37:27:9:18:27:96.43%:99:3.7915E-15:37:1:1:0:29 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:26:10:16:27:96.3%:99:1.4382E-14:60:1:0:1:29 1/1:39:17:10:7:18:94.44%:86:2.0936E-9:60:1:1:0:18 1/1:42:22:11:11:24:91.67%:99:1.0078E-11:33:2:1:1:25 1/1:38:19:7:12:21:90.48%:93:4.7003E-10:49:2:2:0:21 1/1:37:23:10:13:25:92%:99:2.7767E-12:37:2:1:1:25 0/1:36:24:7:17:26:88.89%:99:2.0853E-12:52:3:2:1:27 0/1:40:18:7:11:23:78.26%:79:1.1937E-8:29:5:3:2:23 1/1:40:26:9:17:28:92.86%:99:5.6872E-14:29:2:1:1:30 0/1:37:17:9:8:19:89.47%:82:5.9414E-9:35:2:0:2:19 1/1:37:14:8:6:15:93.33%:69:1.0315E-7:33:1:0:1:15 1/1:40:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:19:9:10:20:95%:98:1.5234E-10:33:1:0:1:20 0/1:38:19:10:9:23:82.61%:89:1.0931E-9:32:3:2:1:23 0/1:39:24:5:19:27:85.71%:99:4.7015E-12:36:4:4:0:29 1/1:36:38:17:21:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:21:11:10:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:10:13:25:92%:99:2.7767E-12:60:2:0:2:26 0/1:38:17:7:10:21:73.91%:72:5.7694E-8:31:6:5:1:24 1/1:37:23:11:12:24:92%:99:2.7767E-12:49:2:1:1:25 0/1:33:19:7:12:22:79.17%:84:3.6826E-9:35:5:2:3:24 0/1:44:17:6:11:21:80.95%:76:2.3502E-8:35:4:3:1:21 0/1:39:28:12:16:30:87.5%:99:3.2142E-14:33:4:3:1:33 1/1:37:24:8:16:26:92.31%:99:7.6222E-13:47:2:2:0:31 1/1:37:19:11:8:17:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:24:11:13:26:92.31%:99:7.6222E-13:35:2:0:2:26 1/1:37:18:13:5:18:94.74%:92:5.6585E-10:38:1:0:1:19 0/1:41:20:15:5:23:86.96%:95:3.1579E-10:36:3:1:2:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:35:12:23:37:94.59%:99:4.2437E-19:31:2:2:0:37 1/1:40:12:4:8:12:92.31%:58:1.3461E-6:34:1:0:1:13 1/1:38:18:6:12:20:90%:87:1.6758E-9:28:2:2:0:21 1/1:36:25:11:14:26:96.15%:99:5.4444E-14:33:1:1:0:28 1/1:36:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:18:9:9:17:100%:99:1.1019E-10:0:0:0:0:18 0/1:46:18:8:10:22:81.82%:81:7.1052E-9:31:4:1:3:23 0/1:35:21:10:11:25:84%:97:1.8789E-10:31:4:3:1:26 1/1:36:21:7:14:22:91.3%:99:3.6437E-11:35:2:0:2:23 1/1:36:10:2:8:11:90.91%:47:1.7011E-5:29:1:1:0:11 0/1:32:22:9:13:22:88%:99:2.5916E-11:32:3:1:2:25 0/1:36:19:8:11:21:86.36%:89:1.0931E-9:32:3:1:2:23 0/1:42:8:2:6:9:88.89%:36:2.0568E-4:60:1:1:0:11 0/1:40:24:9:15:28:82.76%:99:9.2544E-12:40:5:2:3:29 1/1:41:33:13:20:33:94.29%:99:5.9366E-18:48:2:1:1:35 0/1:37:12:3:9:12:85.71%:55:2.9913E-6:42:2:2:0:15 1/1:34:27:14:13:27:93.1%:99:1.5465E-14:48:2:1:1:30 0/1:36:8:3:5:9:88.89%:36:2.0568E-4:33:1:0:1:9 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 0/1:39:16:5:11:18:84.21%:73:4.357E-8:42:3:0:3:19 1/1:46:16:9:7:17:94.12%:81:7.7134E-9:44:1:1:0:17 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:6:7:14:92.86%:64:3.7391E-7:34:1:0:1:14 0/1:36:26:12:14:28:86.67%:99:3.9214E-13:33:4:4:0:31 1/1:36:10:6:4:10:90.91%:47:1.7011E-5:30:1:1:0:12 0/1:39:6:2:4:9:66.67%:23:4.5249E-3:33:3:3:0:9 1/1:39:24:6:18:26:92.31%:99:7.6222E-13:46:2:1:1:26 1/1:39:18:9:9:19:94.74%:92:5.6585E-10:34:1:0:1:19 1/1:32:13:8:5:13:92.86%:64:3.7391E-7:35:1:1:0:16 1/1:42:16:8:8:17:94.12%:81:7.7134E-9:28:1:1:0:17 1/1:38:20:14:6:23:90.91%:98:1.3117E-10:35:2:1:1:24 0/1:37:17:8:9:19:89.47%:82:5.9414E-9:36:2:2:0:19 1/1:44:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:11:7:4:12:91.67%:53:4.8074E-6:33:1:1:0:12 0/1:39:14:7:7:16:87.5%:65:2.5454E-7:34:2:0:2:16 1/1:41:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:20:8:12:21:95.24%:99:4.0873E-11:38:1:1:0:21 0/1:42:14:8:6:16:87.5%:65:2.5454E-7:47:2:1:1:16 1/1:40:23:12:11:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:23:10:13:25:92%:99:2.7767E-12:36:2:0:2:25 1/1:37:33:15:18:31:100%:99:1.3852E-19:0:0:0:0:33 0/1:37:16:6:10:18:88.89%:76:2.0936E-8:34:2:1:1:18 0/1:38:24:14:10:29:82.76%:99:9.2544E-12:36:5:1:4:30 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:23:11:12:21:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:32:12:20:34:94.12%:99:2.2142E-17:28:2:2:0:35 1/1:32:22:11:11:19:95.65%:99:2.9149E-12:24:1:1:0:24 1/1:38:25:12:13:26:96.15%:99:5.4444E-14:60:1:0:1:26 0/1:36:22:6:16:25:88%:99:2.5916E-11:35:3:2:1:25 0/1:40:25:14:11:27:89.29%:99:5.8768E-13:34:3:1:2:28 1/1:36:18:11:7:18:90%:87:1.6758E-9:37:2:2:0:20 1/1:35:22:7:15:23:91.67%:99:1.0078E-11:34:2:1:1:25 1/1:37:10:4:6:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:24:9:15:23:100%:99:3.101E-14:0:0:0:0:24 1/1:37:24:11:13:24:96%:99:2.0568E-13:35:1:0:1:26 1/1:35:28:15:13:29:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:41:27:14:13:28:93.1%:99:1.5465E-14:29:2:2:0:29 1/1:41:41:18:23:42:97.62%:99:2.5612E-23:30:1:1:0:43 0/1:35:22:9:13:24:88%:99:2.5916E-11:35:3:1:2:26 1/1:37:28:10:18:31:93.33%:99:4.194E-15:48:2:1:1:31 0/1:36:19:7:12:20:86.36%:89:1.0931E-9:36:3:2:1:22 0/1:36:25:14:11:27:89.29%:99:5.8768E-13:35:3:1:2:28 1/1:34:29:15:14:27:96.67%:99:2.6212E-16:33:1:0:1:31 1/1:36:25:11:14:27:92.59%:99:2.0853E-13:31:2:1:1:27 1/1:34:25:11:14:24:96.15%:99:5.4444E-14:31:1:1:0:26 1/1:36:31:10:21:32:91.18%:99:2.7308E-16:32:3:1:2:34 1/1:35:19:5:14:19:95%:98:1.5234E-10:34:1:0:1:20 1/1:38:24:14:10:22:100%:99:3.101E-14:0:0:0:0:24 1/1:37:32:10:22:34:91.43%:99:7.5196E-17:33:3:1:2:36 1/1:38:26:11:15:28:92.86%:99:5.6872E-14:31:2:2:0:29 0/1:39:14:3:11:16:87.5%:65:2.5454E-7:31:2:1:1:16 1/1:33:24:14:10:22:92.31%:99:7.6222E-13:35:2:1:1:26 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:32:16:8:8:14:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:14:5:9:15:93.33%:69:1.0315E-7:28:1:1:0:16 1/1:33:14:6:8:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:33:15:3:12:14:93.75%:75:2.8282E-8:38:1:0:1:17 1/1:38:26:12:14:28:92.86%:99:5.6872E-14:38:2:2:0:28 0/1:38:14:5:9:16:87.5%:65:2.5454E-7:32:2:1:1:16 1/1:37:22:10:12:22:95.65%:99:2.9149E-12:34:1:0:1:24 1/1:35:22:8:14:23:91.67%:99:1.0078E-11:36:2:0:2:25 1/1:38:23:12:11:24:92%:99:2.7767E-12:32:2:1:1:26 1/1:36:15:5:10:16:93.75%:75:2.8282E-8:36:1:0:1:16 0/1:35:19:13:6:22:79.17%:84:3.6826E-9:34:5:1:4:24 1/1:35:26:17:9:26:92.86%:99:5.6872E-14:33:2:0:2:28 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:15:6:9:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:21:7:14:23:91.3%:99:3.6437E-11:32:2:0:2:24 1/1:43:22:8:14:23:95.65%:99:2.9149E-12:37:1:0:1:24 1/1:37:10:7:3:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:16:6:10:16:94.12%:81:7.7134E-9:30:1:1:0:17 1/1:37:25:10:15:25:96.15%:99:5.4444E-14:24:1:1:0:26 1/1:35:17:10:7:17:94.44%:86:2.0936E-9:36:1:0:1:18 1/1:40:11:4:7:12:91.67%:53:4.8074E-6:34:1:0:1:12 1/1:38:18:9:9:19:94.74%:92:5.6585E-10:38:1:0:1:19 0/1:39:20:10:10:23:86.96%:95:3.1579E-10:31:3:2:1:23 1/1:36:33:12:21:33:91.67%:99:2.0653E-17:42:3:0:3:36 1/1:39:27:11:16:27:96.43%:99:3.7915E-15:34:1:0:1:29 MTB_anc 3929262 . TGGCAACGGC T . PASS AC=1;AF=3.448e-03;AN=290;ANN=T|disruptive_inframe_deletion|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.2715_2723delCAACGGCGG|p.Asn906_Gly908del|2715/4146|2715/4146|905/1381||INFO_REALIGN_3_PRIME,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3929263_3929271delGGCAACGGC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3929263_3929271delGGCAACGGC||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:19:0%:37:1E0:40:19:4:15:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:16 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:10 0/0:0:0:0:0:19:0%:37:1E0:37:19:4:15:19 0/0:0:0:0:0:11:0%:22:1E0:38:11:1:10:11 0/0:0:0:0:0:13:0%:25:1E0:37:13:4:9:15 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:10 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:20 0/0:0:0:0:0:23:0%:44:1E0:38:23:4:19:23 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:10 0/0:0:0:0:0:25:0%:48:1E0:36:25:10:15:25 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:15 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:15 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:13 0/0:0:0:0:0:29:0%:55:1E0:36:29:5:24:29 0/0:0:0:0:0:13:0%:25:1E0:37:13:2:11:14 0/0:0:0:0:0:32:0%:59:1E0:37:32:9:23:33 0/0:0:0:0:0:17:0%:33:1E0:36:17:3:14:17 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:28 0/0:0:0:0:0:13:0%:25:1E0:39:13:2:11:14 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:15 0/0:0:0:0:0:17:0%:33:1E0:37:17:4:13:19 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:20 0/0:0:0:0:0:22:0%:40:1E0:36:22:1:21:23 0/0:0:0:0:0:14:0%:25:1E0:38:14:2:12:15 0/1:38:7:3:4:12:58.33%:27:1.935E-3:36:4:2:2:12 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:14 0/0:0:0:0:0:16:0%:29:1E0:37:16:3:13:16 0/0:0:0:0:0:22:0%:40:1E0:36:22:7:15:22 0/0:0:0:0:0:22:0%:40:1E0:36:22:5:17:23 0/0:0:0:0:0:38:0%:70:1E0:38:38:12:26:39 0/0:0:0:0:0:20:0%:36:1E0:38:20:5:15:21 0/0:0:0:0:0:22:0%:40:1E0:38:22:5:17:24 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:17 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:21 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 0/0:0:0:0:0:14:0%:25:1E0:38:14:1:13:15 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:30 0/0:0:0:0:0:22:0%:40:1E0:35:22:5:17:23 0/0:0:0:0:0:26:0%:47:1E0:36:26:7:19:29 0/0:0:0:0:0:26:0%:47:1E0:37:26:6:20:26 0/0:0:0:0:0:18:0%:32:1E0:37:18:3:15:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:6:14:21 0/0:0:0:0:0:8:0%:14:1E0:37:8:1:7:8 0/0:0:0:0:0:23:0%:44:1E0:36:23:3:20:27 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 0/0:0:0:0:0:15:0%:29:1E0:37:15:2:13:16 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:26 0/0:0:0:0:0:19:0%:37:1E0:37:19:4:15:21 0/0:0:0:0:0:15:0%:29:1E0:39:15:6:9:17 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:12 0/0:0:0:0:0:20:0%:36:1E0:38:20:5:15:20 0/0:0:0:0:0:17:0%:33:1E0:39:17:4:13:18 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:15 0/0:0:0:0:0:18:0%:32:1E0:35:18:7:11:18 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:16 0/0:0:0:0:0:8:0%:14:1E0:37:8:1:7:8 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:21 0/0:0:0:0:0:35:0%:67:1E0:37:35:11:24:37 0/0:0:0:0:0:12:0%:21:1E0:39:12:2:10:12 0/0:0:0:0:0:28:0%:51:1E0:37:28:6:22:28 0/0:0:0:0:0:10:0%:17:1E0:40:10:2:8:10 0/0:0:0:0:0:9:0%:18:1E0:40:9:1:8:9 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:22 0/0:0:0:0:0:23:0%:44:1E0:39:23:7:16:23 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:18 0/0:0:0:0:0:25:0%:48:1E0:37:25:7:18:28 0/0:0:0:0:0:14:0%:25:1E0:37:14:2:12:15 0/0:0:0:0:0:9:0%:18:1E0:37:9:0:9:11 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:0:0:0:0:16:0%:29:1E0:37:16:3:13:18 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:15 0/0:0:0:0:0:16:0%:29:1E0:36:16:5:11:16 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:22 0/0:30:1:0:1:18:5.56%:24:5E-1:36:17:4:13:18 0/0:0:0:0:0:7:0%:14:1E0:40:7:2:5:7 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:13 0/0:0:0:0:0:14:0%:25:1E0:38:14:5:9:14 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:23 0/0:33:1:0:1:13:7.69%:18:5E-1:39:12:5:7:13 0/0:0:0:0:0:19:0%:37:1E0:39:19:5:14:20 0/0:0:0:0:0:13:0%:25:1E0:37:13:4:9:13 0/0:0:0:0:0:20:0%:36:1E0:35:20:4:16:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:10:9:19 0/0:0:0:0:0:23:0%:44:1E0:36:23:7:16:23 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:25 0/0:0:0:0:0:17:0%:33:1E0:37:17:2:15:18 0/0:0:0:0:0:28:0%:51:1E0:38:28:7:21:30 0/0:0:0:0:0:24:0%:44:1E0:38:24:5:19:26 0/0:0:0:0:0:22:0%:40:1E0:36:22:4:18:23 0/0:0:0:0:0:11:0%:22:1E0:36:11:2:9:13 0/0:0:0:0:0:19:0%:37:1E0:36:19:6:13:19 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:25 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:23 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:8 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:29 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:13 0/0:0:0:0:0:31:0%:59:1E0:37:31:9:22:31 0/0:0:0:0:0:21:0%:40:1E0:37:21:3:18:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:6:16:24 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:19 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:23 0/0:0:0:0:0:17:0%:33:1E0:36:17:3:14:20 0/0:0:0:0:0:19:0%:37:1E0:38:19:4:15:20 0/0:0:0:0:0:19:0%:37:1E0:37:19:3:16:22 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:18 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:17 0/0:0:0:0:0:28:0%:51:1E0:37:28:4:24:30 0/0:0:0:0:0:14:0%:25:1E0:36:14:3:11:15 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:24 0/0:0:0:0:0:29:0%:55:1E0:36:29:8:21:30 0/0:0:0:0:0:18:0%:32:1E0:38:18:1:17:19 0/0:0:0:0:0:20:0%:36:1E0:35:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:36:24:6:18:25 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:15 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:11 0/0:0:0:0:0:18:0%:32:1E0:36:18:7:11:18 0/0:0:0:0:0:11:0%:22:1E0:36:11:2:9:11 0/0:0:0:0:0:16:0%:29:1E0:36:16:3:13:17 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:19 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:18 0/0:0:0:0:0:20:0%:36:1E0:37:20:6:14:21 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:18 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:17 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:11 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:21 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:26 0/0:0:0:0:0:11:0%:22:1E0:37:11:1:10:12 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:10 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:23 0/0:0:0:0:0:19:0%:37:1E0:37:19:5:14:20 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:15 0/0:0:0:0:0:14:0%:25:1E0:37:14:2:12:14 0/0:0:0:0:0:20:0%:36:1E0:38:20:3:17:20 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:12 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:10 0/0:0:0:0:0:18:0%:32:1E0:37:18:7:11:20 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:20 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:22 0/0:0:0:0:0:23:0%:44:1E0:36:23:4:19:23 MTB_anc 3930188 . A C . PASS AC=1;AF=3.356e-03;AN=298;ANN=C|missense_variant|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.3620A>C|p.Asp1207Ala|3620/4146|3620/4146|1207/1381||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3930188A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3930188A>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:35:0%:67:1E0:35:35:5:30:37 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:9 0/0:0:0:0:0:27:0%:52:1E0:36:27:2:25:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:21:0%:40:1E0:35:21:4:17:23 0/0:0:0:0:0:10:0%:17:1E0:35:10:1:9:10 0/0:0:0:0:0:19:0%:37:1E0:36:19:3:16:19 0/0:37:1:1:0:8:12.5%:8:5E-1:35:7:1:6:9 0/0:0:0:0:0:25:0%:48:1E0:35:25:5:20:27 0/0:0:0:0:0:20:0%:36:1E0:34:20:4:16:22 0/0:0:0:0:0:11:0%:22:1E0:35:11:1:10:12 0/0:0:0:0:0:22:0%:40:1E0:35:22:1:21:26 0/0:0:0:0:0:12:0%:21:1E0:33:12:1:11:13 0/0:0:0:0:0:30:0%:55:1E0:36:30:2:28:33 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:9 0/0:0:0:0:0:16:0%:29:1E0:37:16:5:11:19 0/0:0:0:0:0:19:0%:37:1E0:36:19:4:15:21 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:9 0/0:0:0:0:0:11:0%:22:1E0:35:11:1:10:11 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:13 0/0:0:0:0:0:16:0%:29:1E0:36:16:3:13:16 0/0:0:0:0:0:23:0%:44:1E0:36:23:5:18:25 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:18 0/0:0:0:0:0:15:0%:29:1E0:34:15:2:13:16 0/0:0:0:0:0:23:0%:44:1E0:35:23:3:20:23 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:24 0/0:0:0:0:0:14:0%:25:1E0:35:14:1:13:15 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:18 0/0:38:1:0:1:17:5.88%:24:5E-1:34:16:1:15:17 0/0:0:0:0:0:27:0%:52:1E0:36:27:3:24:27 0/0:0:0:0:0:24:0%:44:1E0:33:24:7:17:24 0/0:0:0:0:0:27:0%:52:1E0:36:27:5:22:31 0/0:0:0:0:0:14:0%:25:1E0:37:14:1:13:16 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:15 0/0:0:0:0:0:25:0%:48:1E0:36:25:7:18:26 0/0:0:0:0:0:26:0%:47:1E0:35:26:7:19:28 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:17 0/0:0:0:0:0:33:0%:63:1E0:36:33:3:30:36 0/0:0:0:0:0:27:0%:52:1E0:35:27:2:25:28 0/0:0:0:0:0:23:0%:44:1E0:38:23:5:18:25 0/0:0:0:0:0:28:0%:51:1E0:36:28:7:21:30 0/0:0:0:0:0:24:0%:44:1E0:37:24:3:21:25 0/0:0:0:0:0:15:0%:29:1E0:37:15:2:13:17 0/0:0:0:0:0:19:0%:37:1E0:35:19:2:17:19 0/0:0:0:0:0:22:0%:40:1E0:35:22:2:20:25 0/0:0:0:0:0:28:0%:51:1E0:36:28:5:23:31 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:25 0/0:0:0:0:0:21:0%:40:1E0:34:21:0:21:21 0/0:38:1:0:1:24:4.17%:34:5E-1:34:23:3:20:27 0/0:0:0:0:0:9:0%:18:1E0:32:9:0:9:10 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:0:0:0:0:28:0%:51:1E0:35:28:4:24:33 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:10 0/0:0:0:0:0:10:0%:17:1E0:34:10:1:9:10 0/0:0:0:0:0:12:0%:21:1E0:35:12:2:10:13 0/0:0:0:0:0:28:0%:51:1E0:36:28:4:24:30 0/0:0:0:0:0:19:0%:37:1E0:37:19:2:17:20 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:19 0/0:0:0:0:0:21:0%:40:1E0:35:21:2:19:24 0/0:0:0:0:0:19:0%:37:1E0:34:19:4:15:23 0/0:0:0:0:0:20:0%:36:1E0:35:20:3:17:21 0/0:0:0:0:0:24:0%:44:1E0:35:24:5:19:25 0/0:0:0:0:0:20:0%:36:1E0:35:20:2:18:21 0/0:0:0:0:0:17:0%:33:1E0:36:17:1:16:17 0/0:0:0:0:0:26:0%:47:1E0:37:26:6:20:28 0/0:0:0:0:0:42:0%:77:1E0:37:42:5:37:44 0/1:35:14:1:13:21:66.67%:56:2.1998E-6:35:7:1:6:21 0/0:0:0:0:0:18:0%:32:1E0:34:18:3:15:20 0/0:0:0:0:0:8:0%:14:1E0:34:8:4:4:8 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:10 0/0:0:0:0:0:22:0%:40:1E0:35:22:3:19:23 0/0:0:0:0:0:24:0%:44:1E0:35:24:3:21:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:5:14:19 0/0:0:0:0:0:26:0%:47:1E0:38:26:6:20:30 0/0:36:1:0:1:26:3.85%:38:5E-1:36:25:1:24:29 0/0:0:0:0:0:18:0%:32:1E0:36:18:1:17:19 0/0:0:0:0:0:17:0%:33:1E0:33:17:1:16:17 0/0:0:0:0:0:22:0%:40:1E0:34:22:2:20:22 0/0:0:0:0:0:23:0%:44:1E0:35:23:2:21:23 0/0:0:0:0:0:13:0%:25:1E0:38:13:1:12:16 0/0:0:0:0:0:14:0%:25:1E0:37:14:0:14:15 0/0:0:0:0:0:24:0%:44:1E0:37:24:3:21:25 0/0:0:0:0:0:22:0%:40:1E0:35:22:0:22:23 0/0:0:0:0:0:12:0%:21:1E0:37:12:2:10:12 0/0:0:0:0:0:7:0%:14:1E0:38:7:1:6:8 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:18 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:12 0/0:0:0:0:0:12:0%:21:1E0:33:12:3:9:12 0/0:0:0:0:0:22:0%:40:1E0:34:22:6:16:22 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:20 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:20 0/0:0:0:0:0:7:0%:14:1E0:34:7:3:4:8 0/0:0:0:0:0:25:0%:48:1E0:35:25:4:21:28 0/0:0:0:0:0:18:0%:32:1E0:36:18:6:12:21 0/0:0:0:0:0:40:0%:74:1E0:37:40:10:30:43 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:1:10:13 0/0:0:0:0:0:26:0%:47:1E0:35:26:4:22:26 0/0:0:0:0:0:21:0%:40:1E0:34:21:3:18:26 0/0:0:0:0:0:35:0%:67:1E0:34:35:4:31:35 0/0:0:0:0:0:21:0%:40:1E0:35:21:4:17:24 0/0:0:0:0:0:35:0%:67:1E0:34:35:6:29:38 0/0:0:0:0:0:17:0%:33:1E0:35:17:1:16:19 0/0:0:0:0:0:25:0%:48:1E0:34:25:6:19:25 0/0:0:0:0:0:11:0%:22:1E0:36:11:2:9:11 0/0:0:0:0:0:23:0%:44:1E0:35:23:7:16:24 0/0:0:0:0:0:23:0%:44:1E0:36:23:2:21:24 0/0:0:0:0:0:28:0%:51:1E0:36:28:5:23:31 0/0:0:0:0:0:39:0%:74:1E0:35:39:3:36:39 0/0:0:0:0:0:42:0%:77:1E0:37:42:4:38:44 0/0:0:0:0:0:26:0%:47:1E0:35:26:2:24:27 0/0:0:0:0:0:30:0%:55:1E0:38:30:9:21:34 0/0:0:0:0:0:20:0%:36:1E0:34:20:6:14:21 0/0:0:0:0:0:28:0%:51:1E0:35:28:2:26:30 0/0:0:0:0:0:17:0%:33:1E0:35:17:1:16:20 0/0:0:0:0:0:21:0%:40:1E0:34:21:3:18:22 0/0:0:0:0:0:23:0%:44:1E0:33:23:2:21:23 0/0:0:0:0:0:27:0%:52:1E0:36:27:2:25:29 0/0:0:0:0:0:13:0%:25:1E0:33:13:1:12:14 0/0:0:0:0:0:16:0%:29:1E0:35:16:6:10:16 0/0:0:0:0:0:48:0%:89:1E0:35:48:6:42:52 0/0:0:0:0:0:18:0%:32:1E0:34:18:4:14:20 0/0:0:0:0:0:18:0%:32:1E0:32:18:1:17:18 0/0:0:0:0:0:19:0%:37:1E0:34:19:1:18:21 0/0:0:0:0:0:18:0%:32:1E0:35:18:3:15:22 0/0:0:0:0:0:13:0%:25:1E0:33:13:1:12:14 0/0:0:0:0:0:10:0%:17:1E0:35:10:0:10:10 0/0:0:0:0:0:17:0%:33:1E0:35:17:2:15:18 0/0:0:0:0:0:11:0%:22:1E0:34:11:1:10:12 0/0:0:0:0:0:17:0%:33:1E0:35:17:1:16:18 0/0:0:0:0:0:11:0%:22:1E0:34:11:0:11:12 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:10 0/0:0:0:0:0:14:0%:25:1E0:33:14:3:11:14 0/0:0:0:0:0:13:0%:25:1E0:34:13:2:11:15 0/0:0:0:0:0:19:0%:37:1E0:35:19:0:19:21 0/0:0:0:0:0:12:0%:21:1E0:33:12:2:10:12 0/0:0:0:0:0:20:0%:36:1E0:35:20:4:16:22 0/0:0:0:0:0:23:0%:44:1E0:36:23:6:17:24 0/0:0:0:0:0:13:0%:25:1E0:37:13:2:11:14 0/0:0:0:0:0:39:0%:74:1E0:37:39:6:33:39 0/0:0:0:0:0:24:0%:44:1E0:34:24:5:19:25 0/0:0:0:0:0:13:0%:25:1E0:37:13:2:11:14 0/0:0:0:0:0:38:0%:70:1E0:35:38:12:26:42 0/0:0:0:0:0:27:0%:52:1E0:36:27:8:19:28 0/0:0:0:0:0:15:0%:29:1E0:35:15:2:13:15 0/0:0:0:0:0:14:0%:25:1E0:35:14:5:9:17 0/0:0:0:0:0:27:0%:52:1E0:36:27:3:24:27 0/0:0:0:0:0:46:0%:85:1E0:36:46:8:38:48 0/0:0:0:0:0:29:0%:55:1E0:36:29:4:25:31 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:14 MTB_anc 3930466 . G GACGGCGGCA . PASS AC=78;AF=0.696;AN=112;ANN=GACGGCGGCA|inframe_insertion|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.3900_3901insGGCGGCAAC|p.Asp1300_Arg1301insGlyGlyAsn|3901/4146|3901/4146|1301/1381||INFO_REALIGN_3_PRIME,GACGGCGGCA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3930466_3930467insACGGCGGCA||||||,GACGGCGGCA|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3930466_3930467insACGGCGGCA||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:35:8:1:7:10:80%:36:2.0568E-4:30:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:7:1:6:8:87.5%:31:6.993E-4:35:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:36:7:1:6:9:77.78%:29:1.1312E-3:36:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:8:1:7:9:88.89%:36:2.0568E-4:26:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:0:6:10:60%:24:3.4965E-3:34:2:1:1:10 0/1:34:7:0:7:10:77.78%:31:6.993E-4:34:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:6:0:6:7:85.71%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:9:1:8:8:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:7:0:7:8:87.5%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:36:7:2:5:8:87.5%:35:2.9138E-4:0:0:0:0:8 0/1:37:6:0:6:7:85.71%:29:1.0823E-3:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 0/1:35:6:0:6:7:85.71%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:7:1:6:9:77.78%:31:6.993E-4:38:1:0:1:9 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:40:8:1:7:9:88.89%:36:2.0568E-4:33:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:9:0:9:12:75%:37:1.6826E-4:36:3:3:0:12 1/1:33:8:1:7:7:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:6:1:5:7:85.71%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:37:13:1:12:15:86.67%:64:3.7391E-7:31:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:33:6:0:6:8:75%:26:2.331E-3:33:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:6:1:5:8:75%:26:2.331E-3:30:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:2:7:10:90%:42:5.9538E-5:37:1:1:0:10 0/1:35:11:1:10:14:78.57%:49:1.0096E-5:35:2:2:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:33:6:1:5:7:75%:29:1.0823E-3:0:0:0:0:8 1/1:35:10:0:10:11:90.91%:47:1.7011E-5:33:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:8:2:6:10:80%:36:2.0568E-4:35:1:1:0:10 0/1:33:9:0:9:10:81.82%:46:2.0568E-5:0:0:0:0:11 0/1:33:14:1:13:16:82.35%:65:2.5454E-7:46:2:1:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:12:1:11:13:92.31%:58:1.3461E-6:37:1:1:0:13 0/1:35:7:0:7:9:77.78%:31:6.993E-4:33:1:0:1:9 0/1:36:8:0:8:8:88.89%:41:7.77E-5:0:0:0:0:9 0/1:36:6:0:6:8:75%:26:2.331E-3:37:1:1:0:8 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:8:0:8:9:88.89%:36:2.0568E-4:37:1:1:0:9 0/1:36:8:1:7:10:80%:36:2.0568E-4:30:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:0:6:7:85.71%:26:2.331E-3:33:1:0:1:7 1/1:33:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:36:7:0:7:9:77.78%:29:1.1312E-3:33:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:38:6:0:6:7:85.71%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:32:9:0:9:7:100%:46:2.0568E-5:0:0:0:0:9 0/1:36:7:2:5:8:87.5%:31:6.993E-4:34:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:35:7:0:7:8:87.5%:31:6.993E-4:37:1:1:0:8 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:9:0:9:11:81.82%:42:5.9538E-5:34:1:0:1:11 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3930469 . C G . PASS AC=94;AF=1.00;AN=94;ANN=G|missense_variant|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.3901C>G|p.Arg1301Gly|3901/4146|3901/4146|1301/1381||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3930469C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3930469C>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:0:8:9:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:14:1:13:15:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3930526 . T G . PASS AC=192;AF=1.00;AN=192;ANN=G|missense_variant|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.3958T>G|p.Trp1320Gly|3958/4146|3958/4146|1320/1381||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3930526T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3930526T>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:34:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:44:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:31:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:10:3:7:11:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:29:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:33:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:32:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:22:4:18:23:95.65%:99:4.7526E-13:0:0:0:0:26 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:33:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:12:7:5:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3930532 . A G . PASS AC=198;AF=1.00;AN=198;ANN=G|missense_variant|MODERATE|PE_PGRS53_Rv3507|gene3580|transcript|Transcript_gene3580|Coding|1/1|c.3964A>G|p.Ser1322Gly|3964/4146|3964/4146|1322/1381||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3930532A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3930532A>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:42:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:34:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:6:3:10:90%:42:5.9538E-5:60:1:1:0:11 1/1:36:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:31:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:34:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:32:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:12:2:10:13:92.31%:58:1.3461E-6:29:1:0:1:13 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:32:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:10:3:7:11:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:23:6:17:24:100%:99:1.2146E-13:0:0:0:0:26 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:33:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:32:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:11 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:33:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:12 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3931461 . C G . PASS AC=1;AF=0.500;AN=2;ANN=G|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.457C>G|p.Pro153Ala|457/5706|457/5706|153/1901||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3931461C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3931461C>G||||||;HOM=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. 0/1:36:7:0:7:8:87.5%:31:6.993E-4:37:1:1:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 3931478 . G A . PASS AC=2;AF=1.00;AN=2;ANN=A|synonymous_variant|LOW|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.474G>A|p.Gly158Gly|474/5706|474/5706|158/1901||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3931478G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3931478G>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. MTB_anc 3931585 . G T . PASS AC=82;AF=1.00;AN=82;ANN=T|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.581G>T|p.Gly194Val|581/5706|581/5706|194/1901||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3931585G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3931585G>T||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:15 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:11 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:30:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:32:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:11 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:15 1/1:33:8:1:7:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:32:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:31:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3931730 . T TGCGGGCGGC . PASS AC=55;AF=0.585;AN=94;ANN=TGCGGGCGGC|disruptive_inframe_insertion|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.731_732insCGGCGCGGG|p.Gly244_Gly245insGlyAlaGly|732/5706|732/5706|244/1901||INFO_REALIGN_3_PRIME,TGCGGGCGGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3931730_3931731insGCGGGCGGC||||||,TGCGGGCGGC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3931730_3931731insGCGGGCGGC||||||;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:35:11:0:11:13:84.62%:49:1.0096E-5:35:2:0:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:29:6:0:6:7:66.67%:23:4.5249E-3:35:3:0:3:9 0/1:29:7:0:7:8:70%:28:1.548E-3:34:3:0:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:8:0:8:9:88.89%:36:2.0568E-4:38:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:7:0:7:8:87.5%:31:6.993E-4:33:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:6:1:5:8:75%:24:3.4965E-3:33:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:37:6:0:6:8:75%:24:3.4965E-3:36:2:0:2:8 0/1:37:7:0:7:9:77.78%:29:1.1312E-3:38:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:33:8:1:7:9:80%:34:3.5723E-4:33:2:0:2:10 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:6:0:6:7:85.71%:26:2.331E-3:36:1:0:1:7 0/1:36:10:2:8:12:83.33%:44:3.3652E-5:34:2:0:2:12 0/1:36:8:0:8:10:80%:34:3.5723E-4:36:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:6:0:6:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:33:8:0:8:10:80%:34:3.5723E-4:33:2:0:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 0/1:37:6:0:6:7:85.71%:26:2.331E-3:35:1:0:1:7 0/1:36:7:0:7:9:77.78%:31:6.993E-4:38:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:5:0:5:7:71.43%:21:7.5758E-3:35:1:0:1:7 0/1:35:6:0:6:8:75%:24:3.4965E-3:36:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:0:8:9:88.89%:36:2.0568E-4:33:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:8:0:8:8:88.89%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:33:6:0:6:7:75%:24:3.4965E-3:36:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:6:1:5:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:0:10:11:90.91%:52:5.4125E-6:0:0:0:0:11 0/1:37:6:0:6:8:75%:24:3.4965E-3:37:2:0:2:8 0/1:37:7:0:7:8:87.5%:31:6.993E-4:34:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:1:5:7:85.71%:26:2.331E-3:36:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:1:7:9:88.89%:36:2.0568E-4:33:1:0:1:9 1/1:35:9:0:9:10:90%:42:5.9538E-5:38:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:10:0:10:11:90.91%:47:1.7011E-5:38:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:33:10:1:9:11:83.33%:44:3.3652E-5:35:2:0:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:15:0:15:18:83.33%:75:2.8282E-8:33:1:0:1:18 0/1:37:9:0:9:11:81.82%:39:1.1057E-4:38:2:0:2:11 1/1:32:10:0:10:10:90.91%:47:1.7011E-5:34:1:0:1:11 1/1:34:26:2:24:26:92.86%:99:5.6872E-14:36:2:0:2:28 0/1:35:10:0:10:11:83.33%:47:1.7011E-5:38:1:0:1:12 1/1:36:13:0:13:14:92.86%:64:3.7391E-7:38:1:0:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:7:0:7:9:77.78%:31:6.993E-4:32:1:0:1:9 0/1:36:8:0:8:9:88.89%:36:2.0568E-4:33:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:35:10:1:9:13:76.92%:44:3.3652E-5:33:2:0:2:13 0/1:33:7:0:7:7:87.5%:31:6.993E-4:30:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:14:1:13:18:77.78%:63:4.8851E-7:38:3:0:3:18 0/1:35:8:2:6:12:66.67%:31:6.7304E-4:33:4:0:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:6:0:6:7:85.71%:26:2.331E-3:34:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:7:0:7:9:77.78%:29:1.1312E-3:35:2:0:2:9 0/1:36:6:2:4:8:75%:24:3.4965E-3:33:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 3932779 . A C . PASS AC=2;AF=1.00;AN=2;ANN=C|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.1775A>C|p.Asp592Ala|1775/5706|1775/5706|592/1901||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3932779A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3932779A>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. MTB_anc 3932963 . G T . PASS AC=2;AF=8.000e-03;AN=250;ANN=T|synonymous_variant|LOW|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.1959G>T|p.Gly653Gly|1959/5706|1959/5706|653/1901||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3932963G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3932963G>T||||||;HET=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:19:0%:37:1E0:35:19:2:17:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:18:0%:32:1E0:37:18:5:13:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:14:0%:25:1E0:39:14:5:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:13:0%:25:1E0:40:13:4:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:35:14:1:13:15 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:13 0/0:38:1:0:1:9:11.11%:11:5E-1:33:8:4:4:9 0/0:0:0:0:0:17:0%:33:1E0:35:17:6:11:17 0/0:0:0:0:0:9:0%:18:1E0:35:9:1:8:9 0/0:0:0:0:0:11:0%:22:1E0:40:11:2:9:12 0/0:0:0:0:0:11:0%:22:1E0:32:11:1:10:11 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:9 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:7 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:35:12:4:8:12 0/0:0:0:0:0:14:0%:25:1E0:35:14:4:10:15 0/0:0:0:0:0:12:0%:21:1E0:40:12:3:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:39:16:5:11:16 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:16 0/0:0:0:0:0:21:0%:40:1E0:35:21:4:17:21 0/0:0:0:0:0:14:0%:25:1E0:36:14:2:12:14 0/0:0:0:0:0:12:0%:21:1E0:41:12:4:8:13 0/0:0:0:0:0:15:0%:29:1E0:35:15:7:8:15 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:7 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 0/0:0:0:0:0:15:0%:29:1E0:40:15:5:10:15 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:7:17:25 0/0:0:0:0:0:11:0%:22:1E0:39:11:3:8:12 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:11 0/0:0:0:0:0:16:0%:29:1E0:35:16:4:12:16 0/0:0:0:0:0:17:0%:33:1E0:38:17:4:13:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:10 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:11 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:12 0/0:0:0:0:0:12:0%:21:1E0:34:12:3:9:12 0/0:0:0:0:0:16:0%:29:1E0:38:16:4:12:16 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:15 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:21:0%:40:1E0:36:21:5:16:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:34:11:4:7:11 0/0:38:1:0:1:21:4.76%:31:5E-1:36:20:4:16:21 0/0:0:0:0:0:9:0%:18:1E0:35:9:3:6:9 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:11 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:12 0/0:0:0:0:0:13:0%:25:1E0:36:13:1:12:13 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:8 0/0:0:0:0:0:9:0%:18:1E0:38:9:3:6:10 0/0:0:0:0:0:10:0%:17:1E0:35:10:1:9:10 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:11 0/0:0:0:0:0:10:0%:17:1E0:38:10:2:8:10 0/0:0:0:0:0:14:0%:25:1E0:35:14:4:10:14 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:14 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:11 0/0:0:0:0:0:7:0%:14:1E0:40:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:39:8:3:5:8 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:14 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:11 0/0:0:0:0:0:12:0%:21:1E0:34:12:7:5:12 0/0:0:0:0:0:16:0%:29:1E0:35:16:4:12:16 0/0:0:0:0:0:13:0%:21:1E0:36:12:1:11:14 0/0:0:0:0:0:13:0%:25:1E0:36:13:1:12:13 0/0:0:0:0:0:8:0%:14:1E0:38:8:5:3:8 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:16 0/0:0:0:0:0:9:0%:18:1E0:34:9:4:5:9 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:9 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:12 0/0:0:0:0:0:15:0%:29:1E0:34:15:2:13:17 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:10 0/0:0:0:0:0:7:0%:14:1E0:40:7:2:5:8 0/0:0:0:0:0:8:0%:14:1E0:32:8:5:3:8 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:38:9:4:5:10 0/0:0:0:0:0:11:0%:22:1E0:32:11:4:7:12 0/0:0:0:0:0:10:0%:17:1E0:35:10:3:7:10 0/0:0:0:0:0:7:0%:14:1E0:40:7:2:5:7 0/0:0:0:0:0:17:0%:33:1E0:35:17:5:12:17 0/0:0:0:0:0:10:0%:17:1E0:38:10:4:6:10 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:16:0%:29:1E0:34:16:4:12:16 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:15 0/0:0:0:0:0:16:0%:29:1E0:35:16:3:13:16 0/0:0:0:0:0:8:0%:14:1E0:39:8:1:7:8 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:10 0/0:0:0:0:0:18:0%:32:1E0:36:18:3:15:19 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:36:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:25:0%:48:1E0:35:25:7:18:25 0/0:0:0:0:0:16:0%:29:1E0:35:16:7:9:19 0/0:0:0:0:0:12:0%:21:1E0:35:12:2:10:12 0/0:0:0:0:0:22:0%:40:1E0:35:22:2:20:23 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:15 0/0:0:0:0:0:23:0%:44:1E0:36:23:6:17:23 0/0:0:0:0:0:8:0%:14:1E0:32:8:2:6:8 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:13 0/0:0:0:0:0:17:0%:33:1E0:33:17:3:14:18 0/0:0:0:0:0:17:0%:33:1E0:36:17:2:15:18 0/0:0:0:0:0:14:0%:25:1E0:37:14:2:12:15 0/0:0:0:0:0:22:0%:40:1E0:34:22:5:17:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:15:0%:29:1E0:39:15:3:12:15 0/0:0:0:0:0:17:0%:33:1E0:37:17:7:10:17 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:13 0/0:0:0:0:0:13:0%:25:1E0:33:13:5:8:16 0/0:0:0:0:0:8:0%:14:1E0:34:8:2:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:35:9:1:8:9 0/0:0:0:0:0:7:0%:14:1E0:37:7:3:4:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:35:7:0:7:8 1/1:35:10:5:5:11:90.91%:47:1.7011E-5:31:1:1:0:11 0/0:0:0:0:0:8:0%:14:1E0:35:8:1:7:9 0/0:0:0:0:0:9:0%:18:1E0:35:9:1:8:9 0/0:0:0:0:0:8:0%:14:1E0:34:8:2:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:36:9:0:9:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:9:0%:18:1E0:35:9:6:3:10 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:13 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:9 0/0:0:0:0:0:14:0%:25:1E0:36:14:3:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:19 0/0:0:0:0:0:8:0%:14:1E0:35:8:1:7:9 0/0:0:0:0:0:20:0%:36:1E0:35:20:6:14:20 0/0:0:0:0:0:15:0%:29:1E0:38:15:3:12:15 0/0:0:0:0:0:7:0%:14:1E0:33:7:2:5:7 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 MTB_anc 3933545 . T C . PASS AC=164;AF=0.988;AN=166;ANN=C|synonymous_variant|LOW|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.2541T>C|p.Gly847Gly|2541/5706|2541/5706|847/1901||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3933545T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3933545T>C||||||;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:16 0/1:36:8:0:8:9:88.89%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:8:1:7:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:11:2:9:12:91.67%:53:4.8074E-6:38:1:0:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:9 0/1:30:7:4:3:8:87.5%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:31:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:32:8:1:7:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:33:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3933624 . C G . PASS AC=130;AF=1.00;AN=130;ANN=G|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.2620C>G|p.Pro874Ala|2620/5706|2620/5706|874/1901||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3933624C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3933624C>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./. 1/1:36:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 ./. 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:15:0:15:16:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:32:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3934022 . T G . PASS AC=2;AF=1.00;AN=2;ANN=G|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3018T>G|p.Asp1006Glu|3018/5706|3018/5706|1006/1901||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934022T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934022T>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 3934096 . A G . PASS AC=10;AF=1.00;AN=10;ANN=G|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3092A>G|p.Asn1031Ser|3092/5706|3092/5706|1031/1901||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934096A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934096A>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3934127 . G C . PASS AC=16;AF=1.00;AN=16;ANN=C|synonymous_variant|LOW|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3123G>C|p.Gly1041Gly|3123/5706|3123/5706|1041/1901||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934127G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934127G>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 MTB_anc 3934140 . C A . PASS AC=44;AF=1.00;AN=44;ANN=A|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3136C>A|p.His1046Asn|3136/5706|3136/5706|1046/1901||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934140C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934140C>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3934690 . C T . PASS AC=31;AF=0.108;AN=286;ANN=T|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3686C>T|p.Ala1229Val|3686/5706|3686/5706|1229/1901||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934690C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934690C>T||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:14:2:12:38:36.84%:48:1.407E-5:36:24:6:18:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:43:7:0:7:34:20.59%:22:5.5492E-3:38:27:8:19:35 0/0:35:1:0:1:13:7.69%:18:5E-1:35:12:3:9:14 0/1:36:6:1:5:18:33.33%:20:9.5308E-3:31:12:4:8:18 0/0:26:4:0:4:13:30.77%:6:4.7826E-2:35:9:5:4:13 0/0:43:6:0:6:32:18.75%:20:1.2087E-2:38:26:11:15:34 0/0:33:2:0:2:9:22.22%:7:2.3529E-1:36:7:5:2:11 0/0:52:3:1:2:21:14.29%:19:1.1585E-1:38:18:5:13:22 0/1:39:8:2:6:28:28.57%:26:2.188E-3:36:20:8:12:30 0/0:26:1:0:1:12:8.33%:14:5E-1:36:11:3:8:12 0/0:31:3:1:2:28:10.71%:28:1.1818E-1:36:25:8:17:33 0/0:31:3:0:3:16:18.75%:11:1.129E-1:37:13:5:8:16 0/0:41:3:0:3:26:11.54%:25:1.1765E-1:36:23:8:15:26 0/0:31:1:0:1:11:9.09%:14:5E-1:32:10:3:7:12 0/0:33:3:1:2:12:25%:6:1.087E-1:34:9:3:6:12 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:34:4:0:4:19:21.05%:13:5.251E-2:35:15:5:10:22 0/0:0:0:0:0:10:0%:17:1E0:35:10:8:2:11 0/0:41:3:1:2:24:12.5%:22:1.1702E-1:36:21:9:12:26 0/0:29:6:0:6:40:15.38%:31:1.2702E-2:37:33:12:21:44 0/0:44:3:1:2:25:12%:25:1.1735E-1:40:22:10:12:27 0/0:0:0:0:0:11:0%:22:1E0:39:11:4:7:12 0/0:34:4:1:3:31:12.9%:29:5.6405E-2:38:27:7:20:33 0/0:37:3:1:2:18:16.67%:14:1.1429E-1:38:15:5:10:19 0/0:33:1:0:1:23:4.35%:34:5E-1:39:22:6:16:23 0/1:42:7:2:5:33:21.21%:22:5.4855E-3:35:26:7:19:35 0/1:43:9:5:4:20:45%:32:6.1425E-4:38:11:4:7:21 0/0:47:3:2:1:15:20%:11:1.1207E-1:37:12:4:8:16 0/0:35:2:0:2:10:20%:7:2.3684E-1:34:8:1:7:11 0/0:37:5:0:5:15:33.33%:6:2.1073E-2:34:10:3:7:15 0/0:39:3:0:3:36:8.33%:40:1.1972E-1:36:33:10:23:36 0/1:44:9:2:7:27:33.33%:30:8.8132E-4:40:18:2:16:30 0/0:38:6:2:4:38:15.79%:28:1.2628E-2:37:32:10:22:39 0/0:40:3:0:3:27:11.11%:28:1.1792E-1:36:24:14:10:27 0/0:37:2:0:2:38:5.26%:50:2.4667E-1:35:36:11:25:39 0/0:29:3:0:3:27:11.11%:28:1.1792E-1:35:24:12:12:28 0/0:31:6:2:4:32:19.35%:20:1.1977E-2:36:25:10:15:32 0/0:46:4:4:0:19:21.05%:13:5.251E-2:36:15:3:12:19 0/0:38:5:0:5:23:21.74%:14:2.4548E-2:36:18:9:9:23 0/0:39:6:1:5:26:23.08%:13:1.1309E-2:38:20:8:12:29 0/0:52:3:1:2:30:10%:31:1.1864E-1:39:27:10:17:32 0/0:37:2:0:2:28:7.14%:34:2.4545E-1:36:26:12:14:30 0/0:32:4:1:3:29:13.79%:26:5.5981E-2:36:25:9:16:29 0/0:46:4:0:4:30:13.79%:26:5.5981E-2:38:25:8:17:32 0/0:45:5:0:5:31:16.13%:24:2.6257E-2:38:26:10:16:33 0/0:48:2:1:1:13:15.38%:13:2.4E-1:37:11:4:7:13 0/0:35:4:0:4:30:13.33%:26:5.62E-2:35:26:9:17:33 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:21 0/0:32:2:1:1:9:22.22%:7:2.3529E-1:35:7:3:4:9 0/0:40:5:3:2:22:22.73%:12:2.4248E-2:36:17:7:10:24 0/0:53:4:0:4:31:12.9%:29:5.6405E-2:35:27:11:16:33 0/0:38:2:1:1:16:12.5%:15:2.4194E-1:37:14:3:11:17 0/0:30:3:0:3:17:17.65%:14:1.1364E-1:36:14:2:12:20 0/0:41:3:0:3:24:12.5%:22:1.1702E-1:37:21:7:14:25 0/0:34:2:0:2:43:4.65%:57:2.4699E-1:36:40:10:30:43 0/0:40:5:0:5:21:23.81%:12:2.3921E-2:35:16:5:11:24 0/1:39:10:1:9:37:27.03%:33:4.8486E-4:35:27:9:18:39 0/0:43:2:0:2:16:12.5%:15:2.4194E-1:37:14:6:8:19 0/0:35:3:0:3:22:13.64%:19:1.1628E-1:36:19:5:14:23 0/0:46:2:1:1:23:8.7%:28:2.4444E-1:37:21:6:15:25 0/1:36:8:4:4:45:17.78%:25:2.7808E-3:38:37:9:28:46 0/0:48:3:0:3:22:13.64%:19:1.1628E-1:34:19:5:14:25 0/0:49:2:0:2:27:7.41%:34:2.4528E-1:35:25:5:20:30 0/0:46:2:1:1:11:18.18%:10:2.381E-1:38:9:3:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:6:1:5:34:17.65%:23:1.2287E-2:38:28:10:18:36 0/1:38:8:0:8:33:24.24%:26:2.4173E-3:41:25:10:15:35 0/0:45:5:2:3:23:21.74%:14:2.4548E-2:36:18:4:14:23 0/0:37:2:1:1:26:7.69%:30:2.451E-1:35:24:5:19:27 0/0:40:3:1:2:24:12.5%:22:1.1702E-1:37:21:6:15:26 0/0:27:2:0:2:23:8.7%:28:2.4444E-1:38:21:6:15:24 0/0:37:6:2:4:20:30%:7:1.0098E-2:38:14:4:10:22 0/0:40:5:0:5:21:23.81%:12:2.3921E-2:36:16:4:12:26 0/1:35:6:1:5:19:31.58%:20:9.828E-3:37:13:2:11:21 0/0:30:2:0:2:12:16.67%:10:2.3913E-1:37:10:1:9:13 0/0:44:3:0:3:16:18.75%:11:1.129E-1:34:13:6:7:18 0/0:44:3:2:1:21:14.29%:19:1.1585E-1:38:18:8:10:23 0/0:37:2:1:1:22:9.09%:24:2.4419E-1:38:20:7:13:22 0/0:37:2:0:2:17:11.76%:18:2.4242E-1:37:15:3:12:19 0/0:26:2:0:2:12:16.67%:10:2.3913E-1:34:10:3:7:13 0/0:37:6:0:6:27:22.22%:16:1.1461E-2:37:21:5:16:29 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:41:5:1:4:19:26.32%:10:2.3166E-2:36:14:4:10:20 0/0:35:4:0:4:18:22.22%:10:5.1948E-2:35:14:5:9:19 0/0:40:6:1:5:34:17.65%:23:1.2287E-2:36:28:8:20:35 0/0:46:4:3:1:18:22.22%:10:5.1948E-2:38:14:5:9:18 0/0:34:5:0:5:29:17.24%:22:2.5917E-2:35:24:5:19:32 0/0:33:3:1:2:23:13.04%:22:1.1667E-1:36:20:2:18:24 0/1:39:8:2:6:37:21.62%:25:2.5617E-3:37:29:8:21:39 0/0:38:5:3:2:19:26.32%:10:2.3166E-2:40:14:4:10:20 0/0:30:3:0:3:18:16.67%:14:1.1429E-1:35:15:2:13:20 0/1:48:7:3:4:32:21.88%:22:5.4182E-3:38:25:9:16:35 0/1:32:10:2:8:28:35.71%:34:3.6855E-4:38:18:8:10:31 0/0:32:3:1:2:33:9.09%:37:1.1923E-1:37:30:9:21:35 0/0:40:4:1:3:12:33.33%:4:4.6584E-2:33:8:3:5:16 0/0:60:1:1:0:27:3.7%:41:5E-1:35:26:6:20:28 0/0:42:5:0:5:21:23.81%:12:2.3921E-2:35:16:3:13:22 0/0:60:1:0:1:10:10%:11:5E-1:32:9:4:5:11 0/0:0:0:0:0:14:0%:25:1E0:34:14:3:11:16 0/0:34:3:1:2:24:12.5%:22:1.1702E-1:35:21:6:15:27 0/1:35:7:1:6:30:23.33%:22:5.2713E-3:37:23:10:13:34 0/1:39:7:3:4:29:24.14%:22:5.1909E-3:37:22:2:20:30 0/1:40:9:2:7:38:23.68%:29:1.1442E-3:37:29:6:23:39 0/1:40:8:1:7:41:19.51%:25:2.6808E-3:37:33:7:26:45 0/1:35:9:0:9:40:22.5%:29:1.1791E-3:37:31:12:19:43 0/0:39:5:0:5:36:13.89%:29:2.6944E-2:36:31:8:23:37 0/0:36:4:1:3:23:17.39%:18:5.4264E-2:35:19:4:15:23 0/1:45:9:0:9:45:20%:29:1.2547E-3:36:36:13:23:45 0/1:31:8:2:6:31:25.81%:26:2.3332E-3:35:23:6:17:33 0/1:34:10:0:10:25:40%:34:3.1821E-4:37:15:3:12:27 0/0:28:5:0:5:26:19.23%:17:2.531E-2:32:21:8:13:31 0/1:43:10:2:8:35:28.57%:33:4.6276E-4:35:25:9:16:37 0/0:29:3:0:3:30:10%:31:1.1864E-1:34:27:9:18:33 0/0:40:3:1:2:26:12%:25:1.1735E-1:37:22:11:11:27 0/0:39:6:0:6:26:23.08%:13:1.1309E-2:35:20:7:13:27 0/1:45:13:6:7:41:31.71%:44:3.9497E-5:36:28:9:19:44 0/1:38:6:2:4:19:31.58%:20:9.828E-3:37:13:3:10:19 0/0:38:3:1:2:20:15%:16:1.1538E-1:35:17:6:11:20 0/1:34:6:1:5:15:40%:20:8.4291E-3:35:9:6:3:18 0/0:30:4:0:4:13:30.77%:6:4.7826E-2:36:9:0:9:13 0/0:25:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/1:40:7:5:2:24:29.17%:23:4.7006E-3:36:17:2:15:24 0/0:39:4:0:4:21:19.05%:15:5.3471E-2:36:17:5:12:21 0/0:44:3:1:2:11:27.27%:7:1.0714E-1:36:8:3:5:11 0/0:48:2:0:2:11:18.18%:10:2.381E-1:37:9:5:4:12 0/0:40:6:2:4:27:23.08%:13:1.1309E-2:35:20:7:13:29 0/0:49:4:0:4:12:33.33%:4:4.6584E-2:35:8:5:3:15 0/0:31:3:0:3:10:30%:4:1.0526E-1:36:7:1:6:12 0/0:60:1:0:1:11:9.09%:14:5E-1:34:10:2:8:12 0/0:31:1:0:1:29:3.45%:45:5E-1:34:28:13:15:29 0/0:40:5:2:3:26:19.23%:17:2.531E-2:36:21:6:15:29 0/0:34:2:2:0:24:8.33%:27:2.4468E-1:37:22:8:14:29 0/0:60:2:0:2:18:11.11%:18:2.4286E-1:39:16:4:12:20 0/1:41:9:1:8:38:23.68%:29:1.1442E-3:35:29:7:22:38 0/0:0:0:0:0:11:0%:17:1E0:36:10:2:8:11 0/0:39:4:0:4:15:26.67%:8:4.9808E-2:36:11:5:6:16 0/0:33:1:0:1:19:5.26%:28:5E-1:36:18:4:14:20 0/1:40:7:4:3:32:21.88%:22:5.4182E-3:38:25:7:18:32 0/0:0:0:0:0:26:0%:47:1E0:35:26:10:16:26 0/0:35:6:2:4:21:28.57%:9:1.0344E-2:35:15:4:11:22 0/0:40:5:2:3:22:22.73%:12:2.4248E-2:37:17:3:14:24 0/1:38:7:2:5:27:25.93%:22:5.0143E-3:36:20:5:15:29 0/1:40:8:2:6:32:25%:26:2.3764E-3:37:24:6:18:32 0/0:33:4:0:4:16:25%:8:5.0612E-2:36:12:5:7:19 MTB_anc 3934699 . G A . PASS AC=173;AF=0.601;AN=288;ANN=A|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3695G>A|p.Ser1232Asn|3695/5706|3695/5706|1232/1901||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934699G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934699G>A||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:32:8:24:37:86.49%:99:4.8717E-16:37:5:1:4:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:28:7:21:35:80%:99:2.4048E-13:38:7:3:4:36 0/1:34:12:3:9:14:85.71%:55:2.9913E-6:38:2:0:2:14 1/1:36:17:5:12:18:94.44%:86:2.0936E-9:38:1:0:1:18 0/1:30:8:2:6:13:61.54%:30:8.238E-4:33:5:2:3:14 0/1:38:31:10:21:35:88.57%:99:7.3316E-16:36:4:1:3:35 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:20:7:13:21:95.24%:99:4.0873E-11:38:1:0:1:21 1/1:39:23:7:16:25:92%:99:2.7767E-12:38:2:2:0:28 1/1:35:11:3:8:12:91.67%:53:4.8074E-6:38:1:0:1:12 0/1:32:18:6:12:27:66.67%:73:4.8354E-8:38:9:1:8:27 0/1:37:12:4:8:14:85.71%:55:2.9913E-6:38:2:0:2:16 0/1:37:20:6:14:25:80%:89:1.1273E-9:37:5:1:4:25 0/1:34:10:2:8:12:83.33%:44:3.3652E-5:31:2:1:1:12 0/1:37:9:3:6:11:81.82%:39:1.1057E-4:38:2:0:2:12 0/1:36:7:3:4:8:87.5%:31:6.993E-4:32:1:1:0:8 0/1:36:6:0:6:7:85.71%:26:2.331E-3:38:1:0:1:8 0/1:39:7:5:2:8:87.5%:31:6.993E-4:38:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:15:3:12:16:93.75%:75:2.8282E-8:38:1:1:0:18 0/1:34:9:6:3:11:81.82%:39:1.1057E-4:38:2:0:2:12 0/1:36:18:8:10:22:81.82%:81:7.1052E-9:36:4:1:3:23 0/1:36:30:8:22:38:81.08%:99:2.1946E-14:35:7:3:4:39 0/1:42:19:9:10:24:79.17%:84:3.6826E-9:36:5:1:4:26 0/1:36:10:5:5:12:83.33%:44:3.3652E-5:36:2:0:2:12 0/1:37:25:8:17:32:78.12%:99:8.3928E-12:37:7:0:7:32 0/1:39:14:7:7:17:82.35%:63:4.8851E-7:36:3:0:3:17 0/1:39:14:4:10:18:77.78%:60:8.0605E-7:37:4:1:3:22 1/1:37:30:10:20:33:90.91%:99:9.89E-16:33:3:1:2:35 0/1:43:14:8:6:18:77.78%:60:8.0605E-7:36:4:0:4:20 1/1:40:14:6:8:15:93.33%:69:1.0315E-7:38:1:0:1:16 1/1:33:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:37:13:3:10:15:86.67%:60:8.7675E-7:33:2:0:2:16 0/1:35:25:9:16:35:71.43%:99:2.8437E-11:37:10:1:9:36 0/1:38:23:4:19:29:79.31%:99:5.3984E-11:38:6:0:6:30 0/1:37:24:9:15:34:70.59%:99:8.7205E-11:37:10:0:10:36 0/1:38:22:12:10:26:84.62%:99:5.5261E-11:37:4:1:3:27 0/1:36:27:11:16:36:75%:99:2.0026E-12:37:9:0:9:39 1/1:36:22:8:14:24:91.67%:99:1.0078E-11:38:2:0:2:27 0/1:36:21:9:12:31:70%:87:1.7919E-9:37:9:2:7:33 0/1:37:16:7:9:19:84.21%:73:4.357E-8:38:3:1:2:19 1/1:37:19:8:11:21:90.48%:93:4.7003E-10:37:2:0:2:22 1/1:37:26:11:15:27:96.3%:99:1.4382E-14:38:1:0:1:28 0/1:40:22:11:11:30:73.33%:93:4.1351E-10:37:8:0:8:32 0/1:34:24:7:17:28:85.71%:99:4.7015E-12:37:4:1:3:28 0/1:35:23:8:15:26:88.46%:99:7.3681E-12:38:3:0:3:26 1/1:38:30:11:19:34:90.91%:99:9.89E-16:38:3:0:3:36 0/1:42:20:6:14:24:83.33%:91:6.3493E-10:38:4:1:3:25 0/1:37:9:3:6:11:81.82%:39:1.1057E-4:35:2:1:1:11 1/1:36:29:9:20:30:96.67%:99:2.6212E-16:38:1:0:1:34 0/1:35:17:8:9:22:77.27%:74:3.8368E-8:38:5:0:5:22 0/1:36:6:3:3:8:75%:24:3.4965E-3:37:2:0:2:8 0/1:38:19:9:10:24:79.17%:84:3.6826E-9:38:5:2:3:25 1/1:39:27:9:18:30:90%:99:4.6134E-14:33:3:1:2:31 0/1:38:12:3:9:17:70.59%:49:1.1285E-5:37:5:0:5:18 0/1:36:15:2:13:18:83.33%:68:1.4655E-7:38:3:0:3:18 0/1:37:20:6:14:24:83.33%:91:6.3493E-10:35:4:1:3:25 0/1:34:35:11:24:49:71.43%:99:1.4675E-15:35:14:0:14:49 0/1:37:18:5:13:21:85.71%:84:3.7603E-9:37:3:0:3:22 0/1:36:26:9:17:33:78.79%:99:2.5824E-12:37:7:0:7:36 0/1:39:10:4:6:14:71.43%:41:7.6278E-5:38:4:2:2:15 0/1:37:19:6:13:24:79.17%:84:3.6826E-9:36:5:0:5:24 0/1:36:18:8:10:24:75%:77:1.8413E-8:38:6:0:6:25 0/1:40:29:12:17:40:72.5%:99:4.43E-13:38:11:0:11:43 0/1:37:18:6:12:22:81.82%:81:7.1052E-9:37:4:0:4:22 0/1:37:20:6:14:30:66.67%:81:7.1675E-9:37:10:0:10:30 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:30:11:19:32:93.75%:99:3.0612E-16:34:2:0:2:33 1/1:40:27:7:20:30:90%:99:4.6134E-14:38:3:0:3:30 0/1:41:16:5:11:24:66.67%:64:3.2617E-7:37:8:1:7:24 0/1:37:21:6:15:26:80.77%:94:3.4262E-10:37:5:0:5:26 0/1:38:21:8:13:24:87.5%:99:9.0704E-11:37:3:0:3:25 0/1:38:17:5:12:23:73.91%:72:5.7694E-8:36:6:1:5:24 0/1:41:16:5:11:18:88.89%:76:2.0936E-8:38:2:0:2:20 0/1:39:19:5:14:24:79.17%:84:3.6826E-9:38:5:1:4:25 0/1:39:13:2:11:16:81.25%:57:1.6121E-6:36:3:0:3:18 0/1:35:10:2:8:13:76.92%:42:5.3843E-5:35:3:0:3:13 0/1:35:13:4:9:15:86.67%:60:8.7675E-7:38:2:0:2:18 0/1:39:17:9:8:22:77.27%:74:3.8368E-8:37:5:1:4:23 0/1:38:19:8:11:22:86.36%:89:1.0931E-9:36:3:0:3:22 0/1:35:12:1:11:19:63.16%:47:1.8611E-5:39:7:2:5:20 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 0/1:37:22:2:20:25:88%:99:2.5916E-11:36:3:0:3:25 1/1:33:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:42:6:2:4:7:85.71%:26:2.331E-3:35:1:0:1:8 0/1:37:14:5:9:20:70%:57:1.6702E-6:36:6:0:6:21 0/1:36:16:4:12:18:88.89%:76:2.0936E-8:38:2:1:1:19 0/1:37:25:9:16:32:78.12%:99:8.3928E-12:37:7:0:7:34 0/1:39:16:8:8:19:84.21%:73:4.357E-8:37:3:1:2:19 0/1:35:25:5:20:31:80.65%:99:4.9949E-12:35:6:0:6:33 0/1:36:16:1:15:23:69.57%:66:2.4726E-7:36:7:2:5:24 0/1:38:32:9:23:42:76.19%:99:9.4228E-15:36:10:3:7:42 1/1:40:18:6:12:20:90%:87:1.6758E-9:38:2:1:1:21 0/1:35:15:4:11:19:78.95%:66:2.5053E-7:37:4:0:4:22 0/1:39:28:13:15:33:84.85%:99:6.9527E-14:35:5:0:5:36 0/1:36:23:11:12:29:79.31%:99:5.3984E-11:32:6:1:5:30 1/1:36:30:11:19:33:90.91%:99:9.89E-16:38:3:0:3:34 0/1:35:14:5:9:16:87.5%:65:2.5454E-7:35:2:0:2:16 0/1:35:19:6:13:28:67.86%:77:1.6265E-8:37:9:1:8:28 0/1:37:14:2:12:18:77.78%:60:8.0605E-7:36:4:0:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:10:4:6:14:71.43%:41:7.6278E-5:38:4:0:4:15 0/1:35:25:6:19:28:89.29%:99:5.8768E-13:38:3:0:3:28 1/1:37:31:12:19:33:93.94%:99:8.2416E-17:36:2:0:2:34 0/1:38:22:6:16:26:84.62%:99:5.5261E-11:37:4:0:4:27 0/1:38:28:8:20:38:73.68%:99:9.4894E-13:37:10:0:10:40 0/1:37:35:10:25:43:81.4%:99:9.5933E-17:36:8:0:8:44 0/1:37:27:10:17:36:75%:99:2.0026E-12:36:9:1:8:40 0/1:37:26:7:19:35:74.29%:99:6.3192E-12:36:9:1:8:37 0/1:34:13:4:9:18:72.22%:54:3.7078E-6:37:5:0:5:18 0/1:38:29:10:19:38:76.32%:99:1.977E-13:36:9:1:8:39 0/1:34:25:8:17:31:80.65%:99:4.9949E-12:36:6:0:6:32 0/1:38:21:4:17:26:80.77%:94:3.4262E-10:38:5:0:5:26 0/1:33:24:4:20:27:88.89%:99:2.0853E-12:36:3:1:2:30 0/1:37:26:8:18:33:78.79%:99:2.5824E-12:36:7:0:7:35 0/1:33:21:6:15:30:70%:87:1.7919E-9:36:9:1:8:30 0/1:38:20:12:8:26:80%:89:1.1273E-9:37:5:0:5:27 1/1:36:24:7:17:26:92.31%:99:7.6222E-13:36:2:0:2:26 0/1:39:31:13:18:38:81.58%:99:6.5838E-15:37:7:0:7:41 0/1:36:14:3:11:17:82.35%:63:4.8851E-7:37:3:1:2:17 0/1:38:7:4:3:16:43.75%:24:3.3988E-3:36:9:1:8:17 0/1:33:10:5:5:13:76.92%:42:5.3843E-5:34:3:1:2:16 1/1:35:12:1:11:13:92.31%:58:1.3461E-6:38:1:0:1:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:20:8:12:23:86.96%:95:3.1579E-10:36:3:0:3:24 0/1:36:16:5:11:21:76.19%:69:1.2221E-7:35:5:0:5:21 0/1:38:11:5:6:13:84.62%:49:1.0096E-5:35:2:0:2:14 1/1:33:9:4:5:10:90%:42:5.9538E-5:30:1:0:1:12 0/1:35:20:8:12:25:83.33%:91:6.3493E-10:37:4:0:4:26 0/1:39:11:3:8:14:78.57%:47:1.6951E-5:35:3:2:1:15 1/1:35:11:2:9:12:91.67%:53:4.8074E-6:38:1:0:1:14 0/1:36:8:2:6:9:88.89%:36:2.0568E-4:34:1:0:1:11 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 0/1:37:19:6:13:27:70.37%:79:1.2089E-8:37:8:2:6:28 0/1:36:21:10:11:25:84%:97:1.8789E-10:33:4:2:2:26 0/1:37:16:4:12:18:88.89%:76:2.0936E-8:57:2:0:2:19 0/1:36:34:6:28:41:82.93%:99:1.7333E-16:34:7:1:6:41 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:10:3:7:14:71.43%:41:7.6278E-5:31:4:2:2:15 0/1:37:11:4:7:19:57.89%:42:6.2811E-5:36:8:1:7:20 0/1:40:27:11:16:33:81.82%:99:4.5192E-13:36:6:1:5:33 0/1:35:21:8:13:25:84%:97:1.8789E-10:38:4:1:3:26 0/1:36:16:5:11:21:76.19%:69:1.2221E-7:37:5:1:4:21 0/1:36:17:4:13:21:80.95%:76:2.3502E-8:37:4:0:4:21 0/1:35:27:7:20:31:87.1%:99:1.125E-13:38:4:1:3:31 0/1:39:25:10:15:30:83.33%:99:2.745E-12:37:5:0:5:32 0/1:36:14:5:9:17:82.35%:63:4.8851E-7:33:3:1:2:18 MTB_anc 3934733 . G C . PASS AC=65;AF=0.236;AN=276;ANN=C|synonymous_variant|LOW|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3729G>C|p.Gly1243Gly|3729/5706|3729/5706|1243/1901||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934733G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934733G>C||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:17:2:15:37:45.95%:61:6.9312E-7:34:20:6:14:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:42:11:1:10:34:32.35%:37:1.8662E-4:40:23:8:15:35 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:36:10:1:9:13 0/1:35:6:1:5:17:35.29%:20:9.2021E-3:42:11:4:7:17 0/0:33:5:0:5:13:38.46%:4:1.9565E-2:34:8:4:4:13 0/1:40:10:0:10:33:30.3%:33:4.3872E-4:36:23:10:13:33 0/0:44:4:2:2:11:36.36%:4:4.5113E-2:43:7:3:4:11 0/0:44:3:1:2:15:20%:11:1.1207E-1:37:12:3:9:15 0/1:43:9:2:7:25:36%:30:8.1542E-4:37:16:4:12:25 0/0:24:2:0:2:12:16.67%:10:2.3913E-1:38:10:3:7:12 0/0:31:6:1:5:21:28.57%:9:1.0344E-2:36:15:3:12:21 0/0:41:4:0:4:13:30.77%:6:4.7826E-2:38:9:2:7:13 0/0:42:6:1:5:24:25%:11:1.0968E-2:35:18:5:13:26 0/0:34:1:0:1:9:11.11%:11:5E-1:35:8:1:7:11 0/0:38:4:1:3:10:40%:3:4.3344E-2:41:6:2:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:7:0:7:23:30.43%:23:4.5803E-3:36:16:3:13:24 0/0:37:1:0:1:9:11.11%:11:5E-1:39:8:5:3:9 0/0:48:4:2:2:16:25%:8:5.0612E-2:35:12:4:8:17 0/1:44:9:1:8:32:28.12%:29:1.0185E-3:38:23:5:18:33 0/0:40:4:1:3:19:21.05%:13:5.251E-2:42:15:5:10:20 0/0:35:1:0:1:13:7.69%:18:5E-1:37:12:5:7:14 0/1:42:7:2:5:27:25.93%:22:5.0143E-3:39:20:3:17:27 0/0:40:4:1:3:16:25%:8:5.0612E-2:36:12:4:8:19 0/0:32:2:0:2:20:10%:21:2.4359E-1:36:18:4:14:22 0/1:39:8:2:6:30:26.67%:26:2.2875E-3:38:22:5:17:32 0/1:47:10:5:5:21:47.62%:36:2.3971E-4:37:11:4:7:23 0/0:32:4:2:2:14:28.57%:6:4.8889E-2:39:10:2:8:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:5:0:5:15:33.33%:6:2.1073E-2:35:10:2:8:16 0/0:44:3:0:3:31:9.68%:34:1.1885E-1:35:28:10:18:31 0/1:40:10:1:9:24:41.67%:35:2.9985E-4:35:14:2:12:26 0/1:40:8:1:7:33:24.24%:26:2.4173E-3:39:25:8:17:34 0/0:48:3:0:3:21:14.29%:19:1.1585E-1:38:18:11:7:21 0/0:33:6:2:4:32:18.75%:20:1.2087E-2:36:26:7:19:33 0/0:34:5:1:4:22:22.73%:12:2.4248E-2:35:17:4:13:23 0/1:44:11:3:8:35:31.43%:37:1.9282E-4:38:24:7:17:35 0/1:44:8:5:3:21:38.1%:27:1.7241E-3:35:13:3:10:21 0/0:35:5:0:5:21:23.81%:12:2.3921E-2:37:16:6:10:23 0/1:41:8:2:6:21:38.1%:27:1.7241E-3:35:13:5:8:21 0/0:52:3:1:2:22:13.64%:19:1.1628E-1:37:19:6:13:24 0/1:34:8:1:7:25:32%:26:2.0146E-3:35:17:4:13:25 0/1:37:7:2:5:28:25%:22:5.1054E-3:35:21:7:14:28 0/0:44:5:1:4:34:14.71%:27:2.6693E-2:38:29:9:20:36 0/0:48:6:0:6:25:24%:14:1.1145E-2:38:19:7:12:25 0/0:48:2:1:1:8:25%:5:2.3333E-1:34:6:1:5:9 0/1:39:10:0:10:32:31.25%:33:4.259E-4:34:22:4:18:35 0/0:45:2:1:1:19:10.53%:21:2.4324E-1:36:17:6:11:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:9:3:6:27:33.33%:30:8.8132E-4:36:18:5:13:28 0/0:44:5:0:5:28:17.86%:19:2.5729E-2:35:23:7:16:29 0/0:45:5:1:4:17:29.41%:8:2.2239E-2:38:12:2:10:17 0/0:43:3:0:3:12:25%:6:1.087E-1:38:9:1:8:14 0/0:40:5:0:5:18:27.78%:8:2.2727E-2:36:13:3:10:18 0/0:34:4:0:4:32:12.5%:29:5.6596E-2:35:28:6:22:33 0/0:45:4:0:4:15:26.67%:8:4.9808E-2:37:11:2:9:17 0/1:41:10:1:9:30:33.33%:33:3.9851E-4:36:20:7:13:30 0/0:42:4:0:4:12:33.33%:4:4.6584E-2:37:8:4:4:12 0/0:40:6:1:5:20:30%:7:1.0098E-2:37:14:4:10:20 0/0:45:5:3:2:24:20.83%:14:2.4823E-2:35:19:4:15:24 0/1:39:12:4:8:41:29.27%:40:9.5339E-5:39:29:7:22:43 0/0:48:4:0:4:17:23.53%:11:5.132E-2:34:13:2:11:17 0/0:43:6:1:5:27:22.22%:16:1.1461E-2:37:21:4:17:28 0/0:39:3:1:2:11:27.27%:7:1.0714E-1:38:8:2:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:44:8:1:7:28:28.57%:26:2.188E-3:37:20:8:12:28 0/1:37:8:1:7:25:32%:26:2.0146E-3:40:17:6:11:26 0/1:41:7:2:5:22:31.82%:23:4.4505E-3:37:15:4:11:23 0/1:39:7:2:5:25:28%:23:4.8126E-3:36:18:3:15:26 0/0:46:6:1:5:22:27.27%:9:1.057E-2:38:16:5:11:23 0/1:38:6:0:6:19:31.58%:20:9.828E-3:42:13:5:8:19 0/1:46:7:2:5:15:46.67%:25:3.1609E-3:36:8:0:8:15 0/1:33:8:1:7:26:30.77%:26:2.076E-3:36:18:7:11:28 0/1:41:9:1:8:19:47.37%:32:5.667E-4:38:10:1:9:20 0/0:35:3:0:3:9:33.33%:4:1.0294E-1:36:6:1:5:9 0/0:39:5:0:5:17:29.41%:8:2.2239E-2:35:12:4:8:17 0/0:48:4:2:2:19:21.05%:13:5.251E-2:38:15:7:8:21 0/0:44:3:1:2:16:18.75%:11:1.129E-1:37:13:5:8:16 0/0:44:3:1:2:18:16.67%:14:1.1429E-1:38:15:2:13:18 0/0:30:2:0:2:10:20%:7:2.3684E-1:38:8:1:7:11 0/1:37:7:1:6:18:38.89%:24:3.8123E-3:39:11:2:9:19 0/0:39:3:0:3:16:18.75%:11:1.129E-1:38:13:2:11:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:41:9:1:8:22:40.91%:31:7.0165E-4:37:13:4:9:22 0/0:37:5:1:4:18:27.78%:8:2.2727E-2:37:13:4:9:18 0/1:40:8:1:7:36:22.22%:25:2.5282E-3:37:28:9:19:36 0/0:54:4:3:1:18:22.22%:10:5.1948E-2:37:14:6:8:18 0/1:35:8:0:8:26:30.77%:26:2.076E-3:35:18:1:17:29 0/0:41:4:1:3:21:19.05%:15:5.3471E-2:37:17:2:15:21 0/1:38:12:4:8:38:31.58%:40:8.7276E-5:38:26:5:21:39 0/0:46:5:3:2:20:25%:10:2.3562E-2:38:15:4:11:21 0/1:40:6:1:5:19:31.58%:20:9.828E-3:35:13:1:12:21 0/1:45:10:3:7:30:33.33%:33:3.9851E-4:35:20:6:14:31 0/1:36:10:1:9:26:38.46%:34:3.3576E-4:35:16:6:10:27 0/0:42:6:2:4:31:19.35%:20:1.1977E-2:39:25:5:20:31 0/1:37:8:2:6:14:57.14%:30:9.6618E-4:34:6:2:4:15 0/0:38:6:2:4:26:23.08%:13:1.1309E-2:36:20:3:17:26 0/1:42:9:0:9:22:40.91%:31:7.0165E-4:34:13:2:11:23 0/0:36:4:0:4:12:33.33%:4:4.6584E-2:34:8:2:6:13 0/0:37:2:1:1:9:22.22%:7:2.3529E-1:36:7:0:7:9 0/0:48:4:1:3:26:15.38%:20:5.5222E-2:36:22:4:18:26 0/1:36:8:2:6:28:28.57%:26:2.188E-3:36:20:8:12:29 0/1:45:9:4:5:25:36%:30:8.1542E-4:35:16:1:15:25 0/1:42:11:2:9:36:30.56%:37:1.9879E-4:37:25:5:20:36 0/1:36:10:1:9:34:29.41%:33:4.51E-4:39:24:4:20:34 0/1:36:9:0:9:32:28.12%:29:1.0185E-3:39:23:9:14:36 0/1:36:9:0:9:32:28.12%:29:1.0185E-3:35:23:6:17:32 0/0:31:5:1:4:13:38.46%:4:1.9565E-2:34:8:1:7:14 0/1:43:10:0:10:35:28.57%:33:4.51E-4:36:24:9:15:37 0/1:35:9:1:8:21:42.86%:31:6.592E-4:35:12:3:9:24 0/1:36:10:0:10:25:40%:34:3.1821E-4:35:15:3:12:27 0/1:33:8:0:8:24:33.33%:27:1.949E-3:34:16:3:13:24 0/1:38:11:1:10:27:40.74%:38:1.362E-4:36:16:5:11:29 0/1:35:7:0:7:22:31.82%:23:4.4505E-3:37:15:5:10:26 0/1:37:9:2:7:27:33.33%:30:8.8132E-4:38:18:11:7:27 0/1:42:7:0:7:20:35%:23:4.158E-3:35:13:3:10:21 0/1:43:15:6:9:38:39.47%:52:5.4463E-6:37:23:7:16:39 0/1:47:8:3:5:16:50%:29:1.2236E-3:34:8:2:6:16 0/0:36:3:1:2:11:27.27%:7:1.0714E-1:35:8:2:6:12 0/1:32:6:1:5:14:42.86%:20:7.971E-3:34:8:4:4:16 0/0:37:5:0:5:13:38.46%:4:1.9565E-2:37:8:1:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:46:8:5:3:24:33.33%:27:1.949E-3:34:16:3:13:25 0/1:43:6:0:6:12:50%:21:6.865E-3:41:6:2:4:15 0/0:47:4:1:3:10:40%:3:4.3344E-2:35:6:2:4:12 0/0:34:4:0:4:13:30.77%:6:4.7826E-2:38:9:3:6:15 0/1:45:7:2:5:20:35%:23:4.158E-3:35:13:2:11:20 0/0:41:4:0:4:11:36.36%:4:4.5113E-2:34:7:3:4:13 0/0:35:2:0:2:9:22.22%:7:2.3529E-1:35:7:1:6:11 0/0:38:4:0:4:10:40%:3:4.3344E-2:36:6:1:5:10 0/0:26:1:0:1:20:5%:27:5E-1:38:19:8:11:21 0/1:38:7:2:5:23:30.43%:23:4.5803E-3:37:16:4:12:24 0/0:40:5:2:3:20:25%:10:2.3562E-2:38:15:5:10:22 0/0:48:2:0:2:17:11.76%:18:2.4242E-1:37:15:4:11:17 0/1:38:13:1:12:39:33.33%:44:3.6837E-5:37:26:2:24:40 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:40:5:0:5:16:31.25%:6:2.1691E-2:34:11:4:7:16 0/0:43:3:2:1:15:20%:11:1.1207E-1:40:12:3:9:15 0/1:46:7:4:3:26:26.92%:23:4.9169E-3:37:19:6:13:26 0/0:34:2:0:2:20:10%:21:2.4359E-1:37:18:4:14:21 0/1:39:7:2:5:18:38.89%:24:3.8123E-3:35:11:2:9:19 0/0:47:6:2:4:20:30%:7:1.0098E-2:37:14:1:13:21 0/1:43:13:3:10:33:39.39%:45:2.8029E-5:36:20:4:16:33 0/1:42:7:1:6:29:24.14%:22:5.1909E-3:37:22:7:15:29 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:39:10:5:5:16 MTB_anc 3934734 . G A . PASS AC=64;AF=0.230;AN=278;ANN=A|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3730G>A|p.Ala1244Thr|3730/5706|3730/5706|1244/1901||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934734G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934734G>A||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:45:15:2:13:37:40.54%:52:5.1339E-6:36:22:6:16:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:11:1:10:34:32.35%:37:1.8662E-4:41:23:8:15:35 0/0:37:2:0:2:13:15.38%:13:2.4E-1:35:11:2:9:13 0/1:36:6:1:5:17:35.29%:20:9.2021E-3:42:11:4:7:17 0/0:32:4:0:4:12:33.33%:4:4.6584E-2:34:8:4:4:13 0/1:38:10:0:10:33:30.3%:33:4.3872E-4:37:23:10:13:33 0/0:48:4:2:2:11:36.36%:4:4.5113E-2:42:7:3:4:11 0/0:43:3:1:2:15:20%:11:1.1207E-1:37:12:3:9:15 0/1:43:9:2:7:24:37.5%:31:7.7962E-4:38:15:3:12:24 0/0:33:1:0:1:11:9.09%:14:5E-1:38:10:3:7:12 0/0:35:4:1:3:17:23.53%:11:5.132E-2:36:13:2:11:20 0/0:37:4:0:4:13:30.77%:6:4.7826E-2:38:9:2:7:13 0/0:42:6:1:5:26:23.08%:13:1.1309E-2:36:20:5:15:26 0/0:34:1:0:1:11:9.09%:14:5E-1:36:10:1:9:11 0/0:41:4:1:3:10:40%:3:4.3344E-2:39:6:2:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:37:6:0:6:23:26.09%:11:1.0777E-2:34:17:3:14:24 0/0:37:1:0:1:9:11.11%:11:5E-1:39:8:5:3:9 0/0:45:4:2:2:17:23.53%:11:5.132E-2:35:13:4:9:17 0/1:44:9:1:8:32:28.12%:29:1.0185E-3:39:23:5:18:33 0/0:39:5:1:4:19:26.32%:10:2.3166E-2:42:14:5:9:20 0/0:31:1:0:1:14:7.14%:17:5E-1:37:13:5:8:14 0/1:42:7:2:5:27:25.93%:22:5.0143E-3:39:20:3:17:27 0/0:40:4:1:3:19:21.05%:13:5.251E-2:36:15:6:9:19 0/0:34:2:0:2:21:9.52%:25:2.439E-1:36:19:4:15:22 0/1:39:8:2:6:29:27.59%:26:2.2392E-3:37:21:5:16:31 0/1:40:12:5:7:23:52.17%:44:3.4748E-5:37:11:4:7:23 0/0:31:4:2:2:15:26.67%:8:4.9808E-2:38:11:3:8:15 0/0:36:2:0:2:8:25%:5:2.3333E-1:33:6:1:5:9 0/0:34:4:0:4:15:26.67%:8:4.9808E-2:35:11:2:9:16 0/0:39:3:0:3:31:9.68%:34:1.1885E-1:37:28:10:18:31 0/1:41:10:1:9:25:40%:34:3.1821E-4:35:15:2:13:26 0/1:41:9:1:8:34:26.47%:29:1.0644E-3:39:25:8:17:34 0/0:50:3:0:3:21:14.29%:19:1.1585E-1:38:18:11:7:21 0/1:36:7:2:5:33:21.21%:22:5.4855E-3:37:26:7:19:33 0/0:32:4:1:3:21:19.05%:15:5.3471E-2:35:17:5:12:23 0/1:42:11:3:8:35:31.43%:37:1.9282E-4:38:24:7:17:35 0/1:41:7:4:3:20:35%:23:3.9926E-3:36:12:3:9:20 0/0:33:6:0:6:22:27.27%:9:1.057E-2:36:16:6:10:23 0/1:39:7:2:5:20:35%:23:4.158E-3:36:13:5:8:21 0/0:52:3:1:2:22:13.64%:19:1.1628E-1:39:19:6:13:24 0/1:34:8:1:7:25:32%:26:2.0146E-3:36:17:4:13:25 0/1:36:7:2:5:27:25.93%:22:5.0143E-3:36:20:7:13:27 0/0:38:5:1:4:34:14.71%:27:2.6693E-2:38:29:9:20:36 0/0:47:6:0:6:24:25%:11:1.0968E-2:40:18:7:11:24 0/0:48:2:1:1:9:22.22%:7:2.3529E-1:34:7:2:5:9 0/1:37:11:0:11:30:36.67%:37:1.594E-4:35:19:4:15:35 0/0:45:2:1:1:19:10.53%:21:2.4324E-1:35:17:7:10:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:9:4:5:27:33.33%:30:8.8132E-4:35:18:5:13:28 0/0:48:4:0:4:27:14.81%:23:5.5494E-2:36:23:7:16:29 0/0:43:5:1:4:17:29.41%:8:2.2239E-2:37:12:2:10:17 0/0:41:3:0:3:13:23.08%:9:1.1E-1:38:10:1:9:14 0/0:37:5:0:5:18:27.78%:8:2.2727E-2:36:13:3:10:18 0/0:33:4:0:4:34:11.76%:31:5.6946E-2:36:30:7:23:34 0/0:41:5:0:5:17:29.41%:8:2.2239E-2:35:12:2:10:17 0/1:42:9:1:8:29:31.03%:30:9.4048E-4:36:20:7:13:30 0/0:39:4:0:4:10:40%:3:4.3344E-2:40:6:2:4:10 0/0:37:6:1:5:21:28.57%:9:1.0344E-2:36:15:4:11:21 0/0:47:4:2:2:23:17.39%:18:5.4264E-2:35:19:4:15:24 0/1:37:12:4:8:40:30%:40:9.2733E-5:39:28:7:21:43 0/0:48:4:0:4:16:25%:8:5.0612E-2:34:12:2:10:16 0/1:40:7:1:6:28:25%:22:5.1054E-3:38:21:4:17:28 0/0:40:3:1:2:11:27.27%:7:1.0714E-1:37:8:2:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:41:8:1:7:28:28.57%:26:2.188E-3:37:20:8:12:28 0/1:39:7:1:6:24:29.17%:23:4.7006E-3:39:17:6:11:26 0/1:39:7:2:5:22:31.82%:23:4.4505E-3:37:15:3:12:22 0/1:39:7:2:5:26:26.92%:23:4.9169E-3:36:19:4:15:26 0/0:45:6:1:5:21:28.57%:9:1.0344E-2:39:15:4:11:22 0/1:36:6:0:6:19:31.58%:20:9.828E-3:42:13:5:8:19 0/1:44:7:2:5:15:46.67%:25:3.1609E-3:36:8:0:8:15 0/1:31:8:1:7:28:28.57%:26:2.188E-3:36:20:7:13:28 0/1:39:9:1:8:20:45%:32:6.1425E-4:37:11:1:10:20 0/0:35:3:0:3:9:33.33%:4:1.0294E-1:35:6:1:5:9 0/0:38:5:0:5:17:29.41%:8:2.2239E-2:35:12:4:8:17 0/0:43:5:2:3:20:25%:10:2.3562E-2:39:15:7:8:21 0/0:40:3:1:2:16:18.75%:11:1.129E-1:39:13:5:8:16 0/0:40:3:1:2:18:16.67%:14:1.1429E-1:37:15:2:13:18 0/0:30:3:0:3:11:27.27%:7:1.0714E-1:38:8:1:7:11 0/1:37:7:1:6:19:36.84%:23:3.9926E-3:38:12:2:10:19 0/0:44:2:0:2:16:12.5%:15:2.4194E-1:37:14:2:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:44:8:1:7:20:40%:27:1.638E-3:38:12:4:8:22 0/0:36:5:1:4:18:27.78%:8:2.2727E-2:38:13:4:9:18 0/0:43:6:1:5:34:17.65%:23:1.2287E-2:38:28:9:19:36 0/0:51:4:3:1:18:22.22%:10:5.1948E-2:37:14:6:8:18 0/1:35:8:0:8:26:30.77%:26:2.076E-3:36:18:2:16:29 0/0:44:3:1:2:20:15%:16:1.1538E-1:37:17:2:15:21 0/1:38:11:3:8:38:28.95%:36:2.1011E-4:38:27:6:21:38 0/0:46:5:3:2:21:23.81%:12:2.3921E-2:38:16:4:12:21 0/1:37:7:1:6:20:35%:23:4.158E-3:36:13:2:11:21 0/1:48:9:3:6:30:30%:30:9.678E-4:36:21:6:15:31 0/1:36:9:1:8:26:34.62%:30:8.4928E-4:36:17:6:11:27 0/0:40:5:2:3:30:16.67%:21:2.6093E-2:39:25:5:20:31 0/1:35:8:1:7:15:53.33%:29:1.0995E-3:34:7:2:5:16 0/0:37:5:2:3:25:20%:17:2.5076E-2:36:20:3:17:26 0/1:41:9:0:9:22:40.91%:31:7.0165E-4:34:13:2:11:23 0/0:28:5:0:5:13:38.46%:4:1.9565E-2:35:8:2:6:14 0/0:37:2:1:1:8:25%:5:2.3333E-1:36:6:0:6:9 0/0:45:5:1:4:26:19.23%:17:2.531E-2:36:21:4:17:26 0/1:35:9:2:7:29:31.03%:30:9.4048E-4:38:20:8:12:29 0/1:47:9:4:5:25:36%:30:8.1542E-4:35:16:1:15:25 0/1:42:11:2:9:35:31.43%:37:1.9282E-4:37:24:4:20:35 0/1:38:9:1:8:33:27.27%:29:1.042E-3:39:24:4:20:34 0/1:35:9:0:9:34:26.47%:29:1.042E-3:38:24:10:14:36 0/1:37:8:0:8:31:25.81%:26:2.3332E-3:35:23:6:17:32 0/0:34:4:1:3:11:36.36%:4:4.5113E-2:33:7:1:6:14 0/1:40:11:0:11:36:30.56%:37:1.9879E-4:36:25:9:16:37 0/1:33:9:1:8:23:39.13%:31:7.4174E-4:35:14:4:10:24 0/1:33:12:0:12:26:46.15%:43:4.6796E-5:36:14:2:12:26 0/1:29:7:0:7:21:33.33%:23:4.3101E-3:35:14:2:12:22 0/1:36:13:2:11:28:46.43%:47:1.9812E-5:37:15:4:11:28 0/1:32:8:0:8:25:32%:26:2.0146E-3:36:17:5:12:26 0/1:36:9:2:7:27:33.33%:30:8.8132E-4:39:18:11:7:27 0/1:42:7:0:7:21:33.33%:23:4.3101E-3:36:14:4:10:21 0/1:44:14:6:8:37:37.84%:48:1.3393E-5:37:23:7:16:38 0/1:42:8:3:5:16:50%:29:1.2236E-3:35:8:2:6:16 0/0:37:3:1:2:11:27.27%:7:1.0714E-1:35:8:2:6:12 0/1:33:6:1:5:16:37.5%:20:8.837E-3:33:10:5:5:16 0/1:35:6:0:6:14:42.86%:20:7.971E-3:37:8:1:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:49:8:5:3:24:33.33%:27:1.949E-3:34:16:3:13:25 0/1:39:7:0:7:14:50%:25:2.8986E-3:39:7:2:5:15 0/0:41:5:1:4:11:45.45%:3:1.7544E-2:36:6:3:3:11 0/0:32:4:0:4:15:26.67%:8:4.9808E-2:36:11:5:6:15 0/1:43:7:2:5:20:35%:23:4.158E-3:35:13:2:11:20 0/0:40:4:0:4:11:36.36%:4:4.5113E-2:35:7:3:4:13 0/0:32:3:0:3:10:30%:4:1.0526E-1:34:7:2:5:11 0/0:41:3:0:3:9:33.33%:4:1.0294E-1:37:6:1:5:10 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:21 0/1:34:7:2:5:23:30.43%:23:4.5803E-3:37:16:3:13:23 0/0:42:4:2:2:18:22.22%:10:5.1948E-2:38:14:5:9:21 0/0:43:2:0:2:17:11.76%:18:2.4242E-1:38:15:4:11:17 0/1:40:12:1:11:37:32.43%:40:8.4418E-5:38:25:3:22:39 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:39:5:0:5:16:31.25%:6:2.1691E-2:36:11:4:7:16 0/0:42:3:2:1:15:20%:11:1.1207E-1:40:12:3:9:15 0/0:45:6:4:2:25:24%:14:1.1145E-2:38:19:6:13:26 0/0:29:2:0:2:21:9.52%:25:2.439E-1:37:19:5:14:21 0/1:42:7:2:5:18:38.89%:24:3.8123E-3:35:11:2:9:19 0/0:46:6:2:4:21:28.57%:9:1.0344E-2:37:15:1:14:21 0/1:42:12:3:9:32:37.5%:41:6.8751E-5:36:20:4:16:33 0/0:43:6:1:5:28:21.43%:16:1.1603E-2:38:22:7:15:29 0/0:37:4:0:4:16:25%:8:5.0612E-2:38:12:5:7:16 MTB_anc 3934744 . C A . PASS AC=2;AF=6.993e-03;AN=286;ANN=A|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3740C>A|p.Thr1247Asn|3740/5706|3740/5706|1247/1901||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934744C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934744C>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:38:3:0:3:33:9.09%:37:1.1923E-1:39:30:3:27:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:3:1:2:31:9.68%:34:1.1885E-1:35:28:6:22:33 0/0:38:1:0:1:11:9.09%:14:5E-1:36:10:1:9:12 0/0:0:0:0:0:17:0%:33:1E0:35:17:5:12:17 0/0:34:2:0:2:10:20%:7:2.3684E-1:35:8:1:7:10 0/0:35:3:1:2:27:11.11%:28:1.1792E-1:37:24:2:22:28 0/0:0:0:0:0:10:0%:17:1E0:39:10:4:6:10 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:14 0/0:34:1:1:0:22:4.55%:31:5E-1:39:21:2:19:22 0/0:0:0:0:0:10:0%:17:1E0:34:10:1:9:10 0/0:38:5:0:5:15:33.33%:6:2.1073E-2:35:10:0:10:16 0/0:36:1:0:1:11:9.09%:14:5E-1:36:10:1:9:13 0/0:38:2:0:2:22:9.09%:24:2.4419E-1:36:20:1:19:23 0/0:33:1:0:1:10:10%:11:5E-1:34:9:0:9:11 0/0:38:1:0:1:9:11.11%:11:5E-1:37:8:3:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:0:1:9:11.11%:11:5E-1:35:8:0:8:9 0/0:37:1:0:1:7:14.29%:8:5E-1:51:6:4:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:36:9:0:9:9 0/0:0:0:0:0:23:0%:44:1E0:36:23:2:21:24 0/0:38:1:0:1:8:12.5%:8:5E-1:32:7:3:4:8 0/0:38:1:0:1:10:10%:11:5E-1:37:9:1:8:13 0/0:33:2:0:2:26:7.69%:30:2.451E-1:38:24:3:21:28 0/0:38:1:0:1:17:5.88%:24:5E-1:38:16:4:12:17 0/0:38:1:0:1:11:9.09%:14:5E-1:31:10:3:7:12 0/0:36:4:0:4:26:15.38%:20:5.5222E-2:38:22:5:17:26 0/0:35:2:0:2:13:15.38%:13:2.4E-1:36:11:2:9:14 0/0:38:1:0:1:19:5.26%:28:5E-1:35:18:2:16:19 0/0:38:1:0:1:27:3.7%:41:5E-1:37:26:3:23:30 0/0:38:3:0:3:21:14.29%:19:1.1585E-1:37:18:7:11:21 0/0:38:1:0:1:13:7.69%:18:5E-1:36:12:4:8:14 0/0:0:0:0:0:8:0%:14:1E0:34:8:1:7:8 0/0:0:0:0:0:14:0%:25:1E0:35:14:2:12:15 0/0:34:4:1:3:23:17.39%:18:5.4264E-2:36:19:1:18:24 0/0:37:5:0:5:22:22.73%:12:2.4248E-2:38:17:2:15:25 0/1:37:7:0:7:30:23.33%:22:5.2713E-3:37:23:4:19:30 0/0:34:2:1:1:16:12.5%:15:2.4194E-1:36:14:4:10:16 0/0:35:3:0:3:26:11.54%:25:1.1765E-1:37:23:3:20:27 0/0:35:1:0:1:18:5.56%:24:5E-1:33:17:2:15:20 0/1:36:7:1:6:33:21.21%:22:5.4855E-3:38:26:8:18:34 0/0:38:2:1:1:17:12.5%:15:2.4194E-1:36:14:5:9:19 0/0:32:1:0:1:16:6.25%:21:5E-1:36:15:0:15:19 0/0:36:1:0:1:21:4.76%:31:5E-1:38:20:7:13:22 0/0:36:3:0:3:20:15%:16:1.1538E-1:37:17:4:13:20 0/0:38:2:0:2:20:10%:21:2.4359E-1:36:18:1:17:22 0/0:0:0:0:0:18:0%:32:1E0:34:18:3:15:20 0/0:36:3:0:3:31:9.68%:34:1.1885E-1:36:28:7:21:34 0/0:38:3:1:2:18:16.67%:14:1.1429E-1:39:15:1:14:20 0/0:38:1:0:1:8:12.5%:8:5E-1:38:7:1:6:8 0/0:35:2:0:2:28:7.14%:34:2.4545E-1:36:26:0:26:30 0/0:38:1:0:1:14:7.14%:17:5E-1:36:13:2:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:5:2:3:22:22.73%:12:2.4248E-2:38:17:2:15:24 0/0:38:2:0:2:24:8.33%:27:2.4468E-1:35:22:2:20:24 0/0:35:2:0:2:15:13.33%:16:2.4138E-1:34:13:2:11:15 0/0:38:1:0:1:12:8.33%:14:5E-1:34:11:1:10:12 0/0:38:2:0:2:14:14.29%:12:2.4074E-1:35:12:0:12:14 0/0:38:3:0:3:23:13.04%:22:1.1667E-1:35:20:1:19:25 0/0:35:2:0:2:17:11.76%:18:2.4242E-1:36:15:1:14:17 0/0:36:3:0:3:24:12.5%:22:1.1702E-1:37:21:2:19:25 0/0:0:0:0:0:10:0%:17:1E0:33:10:1:9:10 0/0:38:3:0:3:17:17.65%:14:1.1364E-1:38:14:2:12:17 0/0:36:4:0:4:22:18.18%:15:5.3885E-2:37:18:5:13:24 0/0:37:6:0:6:33:18.18%:23:1.219E-2:36:27:7:20:37 0/0:33:1:0:1:12:8.33%:14:5E-1:34:11:0:11:13 0/0:37:5:0:5:26:19.23%:17:2.531E-2:35:21:3:18:27 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:21:0%:40:1E0:35:21:3:18:25 0/0:38:2:0:2:23:8.7%:28:2.4444E-1:36:21:5:16:23 0/0:36:5:0:5:19:26.32%:10:2.3166E-2:38:14:3:11:20 0/0:36:4:0:4:21:19.05%:15:5.3471E-2:37:17:2:15:21 0/0:38:1:0:1:23:4.35%:34:5E-1:35:22:2:20:24 0/0:38:2:1:1:17:11.76%:18:2.4242E-1:38:15:3:12:17 0/0:32:1:0:1:17:5.88%:24:5E-1:38:16:2:14:17 0/0:36:3:1:2:25:12%:25:1.1735E-1:33:22:5:17:27 0/0:36:2:0:2:18:11.11%:18:2.4286E-1:36:16:1:15:19 0/0:0:0:0:0:8:0%:14:1E0:32:8:1:7:9 0/0:0:0:0:0:12:0%:21:1E0:36:12:0:12:12 0/0:36:3:1:2:15:20%:11:1.1207E-1:40:12:3:9:16 0/0:34:1:0:1:15:6.67%:21:5E-1:37:14:3:11:16 0/0:38:4:0:4:16:25%:8:5.0612E-2:37:12:1:11:16 0/0:0:0:0:0:10:0%:17:1E0:35:10:1:9:11 0/0:35:2:0:2:18:11.11%:18:2.4286E-1:35:16:2:14:18 0/0:0:0:0:0:15:0%:29:1E0:37:15:0:15:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:4:0:4:20:20%:13:5.3015E-2:39:16:3:13:22 0/0:33:1:0:1:15:6.67%:21:5E-1:37:14:2:12:16 0/0:35:4:0:4:28:14.29%:23:5.5746E-2:38:24:4:20:29 0/0:38:2:1:1:15:13.33%:16:2.4138E-1:41:13:6:7:15 0/0:38:2:0:2:27:7.41%:34:2.4528E-1:34:25:1:24:30 0/0:38:3:1:2:16:18.75%:11:1.129E-1:38:13:1:12:17 0/0:36:6:0:6:34:17.65%:23:1.2287E-2:36:28:5:23:34 0/0:33:2:1:1:18:11.11%:18:2.4286E-1:38:16:5:11:19 0/0:36:2:0:2:19:10.53%:21:2.4324E-1:35:17:1:16:21 0/0:34:2:0:2:25:8%:31:2.449E-1:40:23:5:18:29 0/0:36:3:0:3:22:13.64%:19:1.1628E-1:35:19:4:15:24 0/0:35:3:0:3:27:11.11%:28:1.1792E-1:36:24:5:19:29 0/0:35:1:0:1:14:7.14%:17:5E-1:36:13:2:11:15 0/0:37:5:1:4:23:21.74%:14:2.4548E-2:36:18:2:16:24 0/0:38:2:0:2:20:10%:21:2.4359E-1:36:18:1:17:25 0/0:38:1:0:1:11:9.09%:14:5E-1:31:10:1:9:13 0/0:38:2:0:2:8:25%:5:2.3333E-1:40:6:1:5:8 0/0:0:0:0:0:22:0%:40:1E0:36:22:3:19:22 0/0:38:1:0:1:22:4.55%:31:5E-1:36:21:5:16:24 0/0:35:2:0:2:20:10%:21:2.4359E-1:41:18:5:13:22 0/0:35:4:0:4:28:14.29%:23:5.5746E-2:35:24:4:20:31 0/0:38:1:0:1:30:3.33%:44:5E-1:36:29:4:25:31 0/0:35:4:1:3:23:17.39%:18:5.4264E-2:35:19:0:19:26 0/0:35:4:0:4:26:15.38%:20:5.5222E-2:36:22:2:20:29 0/0:32:2:0:2:12:16.67%:10:2.3913E-1:33:10:1:9:12 0/0:37:4:0:4:25:16%:21:5.4928E-2:37:21:0:21:27 0/0:35:2:0:2:22:9.09%:24:2.4419E-1:34:20:1:19:23 0/0:38:3:0:3:27:11.11%:28:1.1792E-1:34:24:1:23:29 0/0:33:1:0:1:20:5%:27:5E-1:35:19:0:19:20 0/0:38:2:0:2:26:7.69%:30:2.451E-1:36:24:3:21:27 0/0:36:4:1:3:21:19.05%:15:5.3471E-2:35:17:1:16:25 0/0:33:1:0:1:19:5.26%:28:5E-1:36:18:6:12:20 0/0:38:1:0:1:21:4.76%:31:5E-1:37:20:2:18:21 0/0:37:2:0:2:33:6.06%:44:2.4615E-1:39:31:9:22:35 0/0:38:1:0:1:14:7.14%:17:5E-1:39:13:3:10:14 0/0:35:3:0:3:11:27.27%:7:1.0714E-1:33:8:2:6:13 0/0:34:2:0:2:11:18.18%:10:2.381E-1:33:9:1:8:12 0/0:34:1:0:1:15:6.67%:21:5E-1:35:14:1:13:15 0/0:38:1:0:1:7:14.29%:8:5E-1:35:6:2:4:7 0/0:35:2:0:2:20:10%:21:2.4359E-1:41:18:5:13:21 0/0:0:0:0:0:11:0%:22:1E0:37:11:1:10:15 0/0:33:1:0:1:10:10%:11:5E-1:34:9:1:8:10 0/0:32:1:0:1:11:9.09%:14:5E-1:32:10:2:8:11 0/0:36:2:0:2:20:10%:21:2.4359E-1:39:18:2:16:20 0/0:32:1:1:0:10:10%:11:5E-1:35:9:0:9:12 0/0:34:1:0:1:9:11.11%:11:5E-1:33:8:1:7:11 0/0:0:0:0:0:10:0%:17:1E0:36:10:0:10:10 0/0:0:0:0:0:17:0%:33:1E0:34:17:3:14:18 0/0:37:3:0:3:19:15.79%:17:1.1486E-1:37:16:3:13:22 0/0:0:0:0:0:15:0%:29:1E0:38:15:2:13:15 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:15 0/0:38:2:0:2:34:5.88%:43:2.4627E-1:37:32:2:30:36 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:1:2:14:21.43%:9:1.1111E-1:36:11:0:11:14 0/0:37:2:0:2:16:12.5%:15:2.4194E-1:36:14:6:8:16 0/0:37:4:0:4:22:18.18%:15:5.3885E-2:37:18:7:11:23 0/0:36:2:0:2:20:10%:21:2.4359E-1:35:18:1:17:20 0/0:38:1:0:1:16:6.25%:21:5E-1:38:15:2:13:17 0/0:38:2:0:2:18:11.11%:18:2.4286E-1:39:16:3:13:21 0/0:38:2:0:2:30:6.67%:37:2.4576E-1:38:28:5:23:31 0/0:35:1:0:1:24:4.17%:34:5E-1:36:23:4:19:24 0/0:35:1:0:1:11:9.09%:14:5E-1:36:10:0:10:13 MTB_anc 3934822 . TCGGCGGGGACGGCGGCAACGCCGGATTCGGCGCCGGTGTTCCCGGCGA T . PASS AC=1;AF=3.401e-03;AN=294;ANN=T|inframe_deletion|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3874_3921delGACGGCGGCAACGCCGGATTCGGCGCCGGTGTTCCCGGCGACGGCGGG|p.Asp1292_Gly1307del|3874/5706|3874/5706|1292/1901||INFO_REALIGN_3_PRIME,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934823_3934870delCGGCGGGGACGGCGGCAACGCCGGATTCGGCGCCGGTGTTCCCGGCGA||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934823_3934870delCGGCGGGGACGGCGGCAACGCCGGATTCGGCGCCGGTGTTCCCGGCGA||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:37:3:0:3:35:8.57%:40:1.1957E-1:36:32:12:20:35 0/0:37:1:1:0:11:9.09%:14:5E-1:48:10:6:4:11 0/0:36:6:0:6:38:15.79%:28:1.2628E-2:36:32:17:15:38 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:10 0/0:0:0:0:0:23:0%:44:1E0:36:23:12:11:27 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:15 0/0:35:4:0:4:27:14.81%:23:5.5494E-2:37:23:6:17:29 0/0:34:2:2:0:15:13.33%:16:2.4138E-1:38:13:7:6:17 0/0:38:1:0:1:15:6.67%:21:5E-1:36:14:7:7:19 0/0:37:1:0:1:31:3.23%:48:5E-1:36:30:12:18:31 0/0:0:0:0:0:16:0%:29:1E0:37:16:6:10:17 0/0:0:0:0:0:19:0%:37:1E0:35:19:8:11:21 0/0:37:1:0:1:16:6.25%:21:5E-1:39:15:9:6:17 0/0:37:3:1:2:32:9.38%:34:1.1905E-1:37:29:9:20:32 0/0:32:1:0:1:18:5.56%:24:5E-1:35:17:8:9:18 0/0:27:2:1:1:18:11.11%:18:2.4286E-1:38:16:9:7:19 0/0:0:0:0:0:10:0%:17:1E0:34:10:6:4:10 0/0:37:1:0:1:11:9.09%:14:5E-1:36:10:5:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:0:0:0:0:14:0%:25:1E0:40:14:8:6:15 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:31:2:0:2:26:7.69%:30:2.451E-1:38:24:9:15:28 0/0:30:1:0:1:12:8.33%:14:5E-1:39:11:4:7:12 0/0:37:1:1:0:30:3.33%:44:5E-1:36:29:14:15:30 0/0:34:4:1:3:40:10%:40:5.7784E-2:38:36:17:19:41 0/0:37:1:0:1:30:3.33%:44:5E-1:38:29:16:13:32 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:19 0/0:0:0:0:0:24:0%:44:1E0:38:24:11:13:25 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:23 0/0:37:1:0:1:24:4.17%:34:5E-1:37:23:10:13:24 0/0:30:4:2:2:32:12.12%:32:5.6777E-2:37:29:11:18:35 0/0:36:3:2:1:25:12%:25:1.1735E-1:36:22:11:11:26 0/0:0:0:0:0:20:0%:36:1E0:37:20:13:7:20 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:8 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:22 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:25 0/0:36:5:1:4:24:20.83%:14:2.4823E-2:39:19:7:12:26 0/0:34:3:1:2:41:7.32%:50:1.2037E-1:36:38:19:19:42 0/0:37:1:0:1:23:4.35%:34:5E-1:37:22:12:10:24 0/0:37:2:0:2:30:6.67%:37:2.4576E-1:36:28:10:18:31 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:26 0/0:35:3:0:3:28:10.71%:28:1.1818E-1:35:25:14:11:28 0/0:37:1:0:1:23:4.35%:34:5E-1:38:22:12:10:23 0/0:37:3:0:3:21:14.29%:19:1.1585E-1:35:18:6:12:21 0/0:34:1:1:0:28:3.57%:41:5E-1:38:27:13:14:32 0/0:0:0:0:0:38:0%:70:1E0:36:38:20:18:38 0/0:36:3:0:3:31:9.68%:34:1.1885E-1:37:28:9:19:32 0/0:0:0:0:0:27:0%:52:1E0:36:27:12:15:28 0/0:0:0:0:0:36:0%:66:1E0:36:36:13:23:38 0/0:37:1:0:1:22:4.55%:31:5E-1:38:21:6:15:22 0/0:38:1:1:0:19:5.26%:28:5E-1:38:18:11:7:20 0/0:37:2:0:2:35:5.71%:47:2.4638E-1:36:33:7:26:36 0/0:0:0:0:0:19:0%:37:1E0:35:19:5:14:19 0/0:32:1:1:0:13:7.69%:18:5E-1:39:12:5:7:13 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:28 0/0:47:2:0:2:45:4.44%:64:2.4719E-1:36:43:21:22:46 0/0:0:0:0:0:19:0%:37:1E0:39:19:10:9:21 0/0:37:1:0:1:19:5.26%:28:5E-1:37:18:8:10:19 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:22 0/0:37:2:0:2:29:6.9%:37:2.4561E-1:36:27:11:16:30 0/0:37:2:0:2:24:8.33%:27:2.4468E-1:34:22:8:14:27 0/0:36:3:0:3:31:9.68%:34:1.1885E-1:34:28:13:15:32 0/0:37:1:0:1:16:6.25%:21:5E-1:39:15:8:7:17 0/0:37:1:1:0:22:4.55%:31:5E-1:37:21:7:14:22 0/0:37:2:1:1:29:6.9%:37:2.4561E-1:36:27:9:18:31 0/1:36:7:1:6:41:17.07%:22:5.9136E-3:37:34:14:20:42 0/0:26:1:0:1:24:4.17%:34:5E-1:38:23:7:16:26 0/0:36:4:1:3:31:12.9%:29:5.6405E-2:37:27:16:11:31 0/0:35:2:1:1:13:15.38%:13:2.4E-1:36:11:5:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:31:0%:59:1E0:36:31:10:21:34 0/0:37:2:0:2:28:7.14%:34:2.4545E-1:37:26:13:13:30 0/0:37:1:0:1:21:4.76%:31:5E-1:40:20:8:12:22 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:35:29:13:16:31 0/0:37:1:0:1:22:4.55%:31:5E-1:39:21:11:10:22 0/0:37:1:1:0:21:4.76%:31:5E-1:39:20:5:15:23 0/0:37:1:0:1:22:4.55%:31:5E-1:37:21:5:16:24 0/0:36:5:0:5:23:21.74%:14:2.4548E-2:38:18:10:8:25 0/0:37:1:0:1:14:7.14%:17:5E-1:35:13:5:8:16 0/0:37:2:0:2:19:10.53%:21:2.4324E-1:36:17:2:15:19 0/0:38:1:1:0:24:4.17%:34:5E-1:37:23:11:12:26 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:34:1:1:0:19:5.26%:28:5E-1:38:18:8:10:22 0/0:0:0:0:0:20:0%:36:1E0:36:20:10:10:20 0/0:35:3:0:3:19:15.79%:17:1.1486E-1:36:16:7:9:21 0/0:32:2:0:2:29:6.9%:37:2.4561E-1:37:27:13:14:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:5:0:5:21:23.81%:12:2.3921E-2:35:16:6:10:21 0/0:37:1:1:0:27:3.7%:41:5E-1:36:26:11:15:27 0/0:37:1:0:1:27:3.7%:41:5E-1:38:26:11:15:28 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:19 0/0:34:1:0:1:36:2.78%:55:5E-1:35:35:10:25:39 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:37:4:1:3:34:11.76%:31:5.6946E-2:36:30:10:20:35 0/0:35:2:1:1:22:9.09%:24:2.4419E-1:37:20:10:10:22 0/0:33:3:0:3:27:11.11%:28:1.1792E-1:36:24:13:11:28 0/0:37:3:0:3:32:9.38%:34:1.1905E-1:36:29:14:15:38 0/0:25:2:0:2:29:6.67%:37:2.4576E-1:35:28:10:18:32 0/0:0:0:0:0:34:0%:62:1E0:37:34:15:19:34 0/0:37:1:0:1:17:5.88%:24:5E-1:37:16:3:13:19 0/0:35:1:0:1:20:5%:27:5E-1:35:19:6:13:20 0/0:37:2:0:2:30:6.67%:37:2.4576E-1:34:28:10:18:31 0/0:0:0:0:0:26:0%:47:1E0:35:26:11:15:29 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:13 0/0:34:1:0:1:30:3.33%:44:5E-1:36:29:12:17:30 0/0:35:4:2:2:30:13.33%:26:5.62E-2:36:26:11:15:30 0/0:34:4:1:3:29:13.79%:26:5.5981E-2:37:25:16:9:30 0/0:37:3:0:3:40:7.5%:46:1.2025E-1:38:37:16:21:41 0/0:32:1:0:1:38:2.63%:58:5E-1:37:37:15:22:38 0/0:35:2:0:2:34:5.88%:43:2.4627E-1:36:32:15:17:36 0/0:0:0:0:0:31:0%:59:1E0:35:31:11:20:31 0/0:38:1:0:1:17:5.88%:24:5E-1:35:16:8:8:18 0/0:0:0:0:0:33:0%:63:1E0:37:33:11:22:34 0/0:37:1:0:1:28:3.57%:41:5E-1:36:27:9:18:36 0/0:0:0:0:0:33:0%:63:1E0:36:33:10:23:35 0/0:37:2:0:2:33:6.06%:44:2.4615E-1:36:31:12:19:33 0/0:34:4:1:3:37:10.81%:38:5.7399E-2:38:33:12:21:40 0/0:35:3:0:3:29:10.34%:31:1.1842E-1:35:26:11:15:30 0/0:36:4:0:4:26:15.38%:20:5.5222E-2:36:22:14:8:27 0/0:37:1:0:1:32:3.12%:48:5E-1:36:31:13:18:33 0/0:37:2:0:2:47:4.26%:67:2.4731E-1:36:45:22:23:47 0/0:0:0:0:0:18:0%:32:1E0:35:18:9:9:19 0/0:0:0:0:0:21:0%:40:1E0:36:21:7:14:26 0/0:37:1:0:1:19:5.26%:28:5E-1:35:18:8:10:19 0/0:0:0:0:0:20:0%:36:1E0:34:20:8:12:20 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:12 0/0:36:1:1:0:23:4.35%:31:5E-1:37:21:7:14:24 0/0:34:4:1:3:25:16%:21:5.4928E-2:35:21:10:11:27 0/0:38:1:0:1:20:5%:27:5E-1:36:19:9:10:21 0/0:37:2:0:2:18:11.11%:18:2.4286E-1:35:16:8:8:19 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:27 0/0:0:0:0:0:11:0%:22:1E0:36:11:1:10:13 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:14 0/0:37:1:0:1:15:6.67%:21:5E-1:36:14:5:9:15 0/0:0:0:0:0:24:0%:44:1E0:36:24:9:15:26 0/0:0:0:0:0:31:0%:59:1E0:35:31:9:22:31 0/0:29:2:1:1:25:8%:31:2.449E-1:35:23:11:12:26 0/0:0:0:0:0:21:0%:40:1E0:35:21:11:10:21 0/0:37:3:0:3:37:8.11%:43:1.1986E-1:36:34:10:24:38 0/0:37:1:0:1:10:10%:11:5E-1:37:9:6:3:11 0/0:34:2:0:2:18:11.11%:18:2.4286E-1:36:16:5:11:18 0/0:37:1:1:0:16:6.25%:21:5E-1:39:15:11:4:17 0/0:38:1:1:0:21:4.76%:31:5E-1:36:20:7:13:23 0/0:24:2:0:2:21:9.09%:24:2.4419E-1:38:20:9:11:22 0/0:37:3:2:1:23:13.04%:22:1.1667E-1:36:20:8:12:24 0/0:36:4:1:3:26:15.38%:20:5.5222E-2:37:22:9:13:26 0/0:34:5:2:3:37:13.51%:32:2.706E-2:36:32:15:17:39 0/0:37:2:0:2:26:7.69%:30:2.451E-1:37:24:9:15:27 0/0:0:0:0:0:19:0%:37:1E0:35:19:7:12:21 MTB_anc 3934831 . A C . PASS AC=3;AF=0.010;AN=286;ANN=C|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.3827A>C|p.Asp1276Ala|3827/5706|3827/5706|1276/1901||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3934831A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3934831A>C||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:7:1:6:26:30.43%:23:4.5803E-3:35:16:3:13:29 0/0:0:0:0:0:8:0%:14:1E0:34:7:4:3:8 0/0:38:3:0:3:23:17.65%:11:1.129E-1:36:13:2:11:25 0/0:34:1:1:0:7:14.29%:8:5E-1:36:6:0:6:8 0/0:38:3:0:3:16:18.75%:11:1.129E-1:35:13:3:10:16 0/0:35:3:0:3:9:33.33%:4:1.0294E-1:35:6:0:6:11 0/0:37:3:0:3:24:15%:16:1.1538E-1:35:17:1:16:24 0/0:38:1:1:0:12:10%:11:5E-1:36:9:2:7:12 0/0:35:2:1:1:13:16.67%:10:2.381E-1:33:9:1:8:13 0/0:37:3:2:1:20:15.79%:17:1.1486E-1:36:16:0:16:22 0/0:35:1:0:1:12:8.33%:14:5E-1:34:11:2:9:12 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:17 0/0:37:1:0:1:9:12.5%:8:5E-1:35:7:3:4:10 0/0:36:5:1:4:27:20.83%:14:2.4548E-2:35:18:2:16:27 0/0:0:0:0:0:10:0%:18:1E0:32:9:0:9:10 0/0:32:3:1:2:13:27.27%:4:1.0526E-1:35:7:1:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:1:0:1:8:14.29%:8:5E-1:38:6:1:5:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:7:0%:14:1E0:35:7:1:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:0:1:19:5.88%:24:5E-1:35:16:2:14:21 0/0:0:0:0:0:9:0%:14:1E0:39:8:1:7:9 0/0:32:2:2:0:17:12.5%:16:2.4138E-1:36:13:1:12:19 0/0:37:4:0:4:30:15.38%:20:5.5222E-2:37:22:5:17:33 0/0:42:2:1:1:18:11.76%:18:2.4242E-1:35:15:3:12:19 0/0:32:1:1:0:11:9.09%:14:5E-1:37:10:3:7:12 0/0:37:5:2:3:18:27.78%:8:2.2727E-2:35:13:3:10:19 0/0:36:2:1:1:18:11.11%:18:2.4286E-1:35:16:2:14:19 0/0:38:1:0:1:17:6.25%:21:5E-1:35:14:1:13:17 0/0:36:4:1:3:27:17.39%:15:5.3885E-2:35:18:2:16:28 0/0:37:4:2:2:20:23.53%:8:5.0612E-2:37:12:1:11:22 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:1:0:1:16:6.25%:21:5E-1:37:15:1:14:17 0/0:30:2:2:0:19:10.53%:18:2.4286E-1:35:16:2:14:21 0/0:35:2:0:2:18:15.38%:13:2.4E-1:38:11:0:11:20 0/0:35:3:0:3:28:12%:25:1.1735E-1:34:22:5:17:33 0/0:34:2:1:1:16:13.33%:16:2.4138E-1:36:13:3:10:16 0/0:37:1:0:1:23:4.76%:31:5E-1:36:20:2:18:23 0/0:35:4:0:4:20:20%:13:5.3015E-2:38:16:4:12:24 0/0:32:5:3:2:23:25%:10:2.3166E-2:38:14:4:10:24 0/0:35:2:1:1:15:14.29%:12:2.4074E-1:35:12:3:9:15 0/0:30:2:1:1:15:16.67%:10:2.3913E-1:35:10:1:9:17 0/0:38:3:0:3:20:15%:16:1.1538E-1:34:17:2:15:22 0/0:34:2:0:2:23:8.7%:24:2.4419E-1:36:20:5:15:24 0/0:35:2:0:2:24:9.52%:25:2.439E-1:36:19:1:18:24 0/0:31:2:1:1:19:10.53%:21:2.4324E-1:35:17:2:15:20 0/0:35:3:1:2:25:12.5%:22:1.1702E-1:36:21:1:20:25 0/0:0:0:0:0:19:0%:32:1E0:36:18:4:14:19 0/0:38:1:0:1:10:11.11%:11:5E-1:32:8:0:8:11 0/0:38:2:0:2:32:6.67%:34:2.4545E-1:35:26:2:24:34 0/0:33:1:1:0:16:6.25%:21:5E-1:35:15:1:14:16 0/0:38:1:0:1:10:11.11%:8:5E-1:37:7:1:6:10 0/0:36:5:2:3:21:23.81%:12:2.3921E-2:36:16:0:16:21 0/0:33:2:1:1:30:7.14%:34:2.4545E-1:35:26:3:23:32 0/0:37:2:0:2:14:14.29%:13:2.4E-1:36:11:2:9:16 0/0:38:1:0:1:11:10%:11:5E-1:36:9:2:7:12 0/0:35:4:0:4:15:26.67%:8:4.9808E-2:35:11:1:10:17 0/0:31:1:1:0:20:5.56%:24:5E-1:35:17:1:16:21 0/0:28:1:0:1:20:5.56%:24:5E-1:35:17:1:16:22 0/0:36:4:1:3:18:26.67%:8:4.9808E-2:36:11:0:11:20 0/0:0:0:0:0:10:0%:18:1E0:36:9:2:7:12 0/0:38:2:0:2:14:15.38%:13:2.4E-1:36:11:1:10:15 0/0:32:2:1:1:24:9.09%:24:2.4419E-1:35:20:2:18:24 0/0:38:1:1:0:36:3.45%:41:5E-1:36:27:7:20:37 0/0:38:2:0:2:18:11.76%:18:2.4242E-1:36:15:1:14:20 0/0:38:2:0:2:16:16.67%:10:2.3913E-1:35:10:1:9:16 0/0:36:1:0:1:10:12.5%:8:5E-1:35:7:1:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:37:6:1:5:26:23.08%:14:1.1145E-2:34:19:2:17:28 0/0:49:2:1:1:21:10.53%:18:2.4286E-1:36:16:5:11:21 0/0:38:3:2:1:18:17.65%:14:1.1364E-1:35:14:1:13:20 0/0:42:5:1:4:17:29.41%:8:2.2239E-2:36:12:1:11:19 0/0:37:1:0:1:19:5.26%:24:5E-1:36:17:2:15:24 0/0:34:4:2:2:19:22.22%:11:5.132E-2:38:13:5:8:19 0/0:38:2:1:1:20:10.53%:21:2.4324E-1:36:17:2:15:21 0/0:33:3:1:2:20:15.79%:14:1.1429E-1:36:15:1:14:20 0/0:37:1:0:1:19:7.14%:18:5E-1:36:12:2:10:20 0/0:38:5:0:5:12:45.45%:3:1.7544E-2:36:6:1:5:13 0/0:37:2:0:2:16:14.29%:12:2.4074E-1:36:12:0:12:16 0/0:36:4:2:2:19:22.22%:11:5.132E-2:35:13:1:12:21 0/0:31:1:1:0:18:5.56%:24:5E-1:37:17:5:12:18 0/0:38:1:0:1:13:8.33%:14:5E-1:36:10:1:9:16 0/0:33:1:0:1:12:8.33%:14:5E-1:35:10:2:8:12 0/0:38:2:0:2:14:18.18%:10:2.381E-1:36:9:1:8:15 0/0:0:0:0:0:15:0%:25:1E0:36:13:1:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:2:0:2:18:15.38%:13:2.4E-1:34:11:2:9:19 0/0:31:2:2:0:18:11.76%:15:2.4194E-1:35:14:1:13:19 0/0:38:5:1:4:22:23.81%:12:2.3921E-2:38:16:5:11:24 0/0:38:1:0:1:11:10%:11:5E-1:37:9:4:5:11 0/0:34:3:1:2:33:9.38%:34:1.1885E-1:36:28:3:25:34 0/0:38:1:0:1:12:8.33%:14:5E-1:37:11:2:9:12 0/0:34:4:1:3:27:17.39%:18:5.4264E-2:36:19:1:18:31 0/0:38:1:1:0:16:7.14%:17:5E-1:36:13:3:10:16 0/0:36:2:0:2:14:18.18%:10:2.381E-1:36:9:0:9:16 0/0:39:5:3:2:31:17.86%:17:2.531E-2:33:21:1:20:32 0/0:36:4:0:4:24:18.18%:15:5.3885E-2:35:18:4:14:26 0/0:40:3:1:2:21:14.29%:19:1.1585E-1:36:18:3:15:26 0/0:36:3:1:2:17:18.75%:11:1.129E-1:36:13:1:12:17 0/0:38:1:0:1:15:7.14%:18:5E-1:37:12:1:11:15 0/0:38:3:0:3:19:17.65%:14:1.1364E-1:35:14:0:14:20 0/0:35:5:0:5:20:25%:10:2.3166E-2:34:14:3:11:22 0/0:34:1:1:0:9:11.11%:11:5E-1:34:8:0:8:9 0/0:46:2:2:0:22:9.52%:25:2.439E-1:36:19:3:16:24 0/0:34:4:2:2:25:19.05%:15:5.3471E-2:36:17:4:13:26 0/0:33:3:1:2:16:25%:6:1.087E-1:36:9:4:5:17 0/0:35:4:1:3:28:16%:21:5.4928E-2:36:21:2:19:28 0/0:36:6:0:6:27:23.08%:14:1.1145E-2:38:19:5:14:28 0/0:35:3:1:2:23:14.29%:19:1.1585E-1:35:18:1:17:25 0/0:35:5:1:4:21:23.81%:12:2.3921E-2:34:16:2:14:22 0/0:35:2:1:1:10:22.22%:7:2.3529E-1:36:7:1:6:10 0/0:37:6:0:6:22:27.27%:9:1.057E-2:36:16:0:16:29 0/0:36:5:0:5:24:21.74%:14:2.4548E-2:35:18:2:16:26 0/0:37:6:0:6:22:27.27%:9:1.057E-2:36:16:1:15:26 0/0:36:5:1:4:21:26.32%:8:2.2727E-2:37:13:0:13:22 0/0:38:2:0:2:32:7.14%:34:2.4528E-1:33:25:5:20:33 0/0:37:4:0:4:22:21.05%:13:5.251E-2:36:15:3:12:23 0/0:38:2:1:1:16:16.67%:10:2.3913E-1:37:10:3:7:16 0/0:34:2:1:1:22:9.52%:21:2.4359E-1:36:18:2:16:25 0/0:37:6:3:3:35:18.18%:23:1.219E-2:36:27:9:18:39 0/0:36:4:2:2:13:30.77%:6:4.7826E-2:36:9:1:8:13 0/0:37:4:1:3:20:20%:10:5.1948E-2:35:14:0:14:21 0/0:34:2:1:1:13:16.67%:10:2.3913E-1:36:10:1:9:13 0/0:38:3:0:3:11:27.27%:4:1.0526E-1:35:7:0:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:7:5:2:21:35%:23:4.158E-3:36:13:2:11:23 0/0:31:2:0:2:18:14.29%:12:2.4074E-1:35:12:2:10:18 0/0:34:3:1:2:15:21.43%:9:1.1111E-1:35:11:1:10:15 0/0:31:2:1:1:14:16.67%:10:2.3913E-1:35:10:3:7:17 0/1:37:6:2:4:19:31.58%:20:9.5308E-3:35:12:2:10:22 0/0:37:1:0:1:11:9.09%:14:5E-1:35:10:0:10:13 0/0:38:1:0:1:10:10%:11:5E-1:35:9:2:7:10 0/0:0:0:0:0:8:0%:14:1E0:36:7:0:7:10 0/0:0:0:0:0:18:0%:32:1E0:36:18:3:15:19 0/0:38:4:1:3:25:16%:21:5.4928E-2:35:21:2:19:25 0/0:32:3:2:1:16:21.43%:9:1.1111E-1:36:11:1:10:18 0/0:38:1:0:1:12:8.33%:14:5E-1:36:10:2:8:14 0/0:38:3:0:3:27:12.5%:22:1.1702E-1:36:21:2:19:28 0/0:31:1:0:1:8:14.29%:8:5E-1:35:6:2:4:8 0/0:38:2:0:2:13:18.18%:10:2.381E-1:36:9:0:9:14 0/0:30:1:1:0:10:11.11%:11:5E-1:36:8:4:4:11 0/0:32:3:2:1:21:15%:17:1.1486E-1:35:16:4:12:21 0/0:37:1:1:0:17:6.67%:21:5E-1:36:14:3:11:18 0/0:34:3:0:3:17:21.43%:6:1.087E-1:37:9:0:9:17 0/0:26:1:1:0:20:6.25%:21:5E-1:34:15:2:13:20 0/0:34:3:2:1:30:12%:22:1.1667E-1:36:20:2:18:30 0/0:36:4:1:3:20:22.22%:10:5.1948E-2:36:14:2:12:22 0/0:38:2:0:2:15:13.33%:12:2.4074E-1:37:12:1:11:16 MTB_anc 3935335 . C T . PASS AC=119;AF=0.561;AN=212;ANN=T|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.4331C>T|p.Ala1444Val|4331/5706|4331/5706|1444/1901||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3935335C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3935335C>T||||||;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:32:19:5:14:25:76%:82:5.8245E-9:37:6:1:5:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:14:7:7:21:66.67%:56:2.1998E-6:37:7:0:7:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:35:8:4:4:11:72.73%:32:5.16E-4:35:3:1:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:34:10:6:4:13:76.92%:42:5.3843E-5:33:3:1:2:14 0/1:35:6:3:3:8:75%:24:3.4965E-3:38:2:0:2:9 0/1:34:7:6:1:8:87.5%:31:6.993E-4:38:1:0:1:9 0/1:35:13:7:6:16:81.25%:57:1.6121E-6:36:3:0:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:16:9:7:19:84.21%:73:4.357E-8:35:3:1:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 0/1:34:17:10:7:23:73.91%:72:5.7694E-8:36:6:0:6:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:31:6:2:4:8:75%:24:3.4965E-3:38:2:1:1:11 0/1:33:13:8:5:17:76.47%:55:2.5647E-6:37:4:0:4:19 0/1:33:8:3:5:10:80%:34:3.5723E-4:35:2:0:2:11 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 0/0:37:3:1:2:9:33.33%:4:1.0294E-1:37:6:3:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:12:4:8:18:66.67%:48:1.4831E-5:36:6:0:6:21 0/1:33:11:4:7:20:55%:41:7.2653E-5:35:9:2:7:20 0/1:34:8:2:6:15:53.33%:29:1.0995E-3:37:7:1:6:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:34:12:7:5:21:57.14%:45:2.658E-5:37:9:3:6:22 1/1:35:12:2:10:13:92.31%:58:1.3461E-6:31:1:0:1:13 0/1:35:13:8:5:15:86.67%:60:8.7675E-7:33:2:0:2:15 1/1:36:11:7:4:12:91.67%:53:4.8074E-6:38:1:1:0:12 0/1:35:22:15:7:27:81.48%:99:1.0343E-10:35:5:1:4:29 0/1:34:12:6:6:16:75%:50:8.0605E-6:34:4:1:3:18 0/1:34:12:6:6:14:85.71%:55:2.9913E-6:31:2:1:1:15 0/1:34:6:5:1:8:75%:24:3.4965E-3:32:2:2:0:9 0/1:31:7:4:3:10:70%:28:1.548E-3:35:3:2:1:10 0/1:35:10:6:4:15:66.67%:40:9.995E-5:34:5:1:4:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:34:11:5:6:14:78.57%:47:1.6951E-5:31:3:2:1:17 0/1:33:15:6:9:20:75%:64:3.8543E-7:35:5:1:4:21 0/1:33:7:3:4:9:77.78%:29:1.1312E-3:34:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:33:15:8:7:23:65.22%:60:9.5813E-7:35:8:1:7:26 1/1:34:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:33:6:2:4:9:66.67%:23:4.5249E-3:36:3:0:3:10 0/1:34:11:7:4:14:78.57%:47:1.6951E-5:37:3:0:3:14 0/1:34:8:6:2:9:88.89%:36:2.0568E-4:38:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:9:2:7:15:60%:34:3.4983E-4:48:6:2:4:19 0/1:36:11:4:7:14:78.57%:47:1.6951E-5:38:3:1:2:15 0/1:35:6:2:4:9:66.67%:23:4.5249E-3:36:3:0:3:11 0/1:32:13:5:8:18:72.22%:54:3.7078E-6:38:5:0:5:19 0/1:35:11:6:5:16:68.75%:44:3.3854E-5:35:5:1:4:18 0/1:31:7:5:2:13:53.85%:25:2.6087E-3:37:6:0:6:13 0/1:34:6:4:2:8:75%:24:3.4965E-3:36:2:0:2:9 0/1:35:15:8:7:22:68.18%:61:7.4178E-7:40:7:3:4:24 1/1:34:11:5:6:12:91.67%:53:4.8074E-6:38:1:0:1:13 0/1:35:14:6:8:17:82.35%:63:4.8851E-7:41:3:1:2:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:9:4:5:14:64.29%:35:2.8986E-4:37:5:0:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:33:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 0/1:34:15:7:8:18:83.33%:68:1.4655E-7:37:3:1:2:22 0/1:33:7:1:6:9:77.78%:29:1.1312E-3:35:2:0:2:10 0/1:33:10:4:6:18:55.56%:37:1.7215E-4:36:8:2:6:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:33:6:3:3:9:66.67%:23:4.5249E-3:38:3:0:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/1:34:14:9:5:16:87.5%:65:2.5454E-7:52:2:1:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:32:12:4:8:16:75%:50:8.0605E-6:36:4:0:4:16 0/1:35:7:4:3:8:87.5%:31:6.993E-4:38:1:0:1:8 0/1:35:10:4:6:16:62.5%:39:1.2413E-4:36:6:2:4:18 0/1:33:9:5:4:12:75%:37:1.6826E-4:34:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:2:8:11:90.91%:47:1.7011E-5:38:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:32:14:8:6:16:87.5%:65:2.5454E-7:36:2:0:2:19 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 0/1:33:12:8:4:16:75%:50:8.0605E-6:38:4:0:4:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:6:1:5:7:85.71%:26:2.331E-3:33:1:0:1:8 0/1:35:11:7:4:15:73.33%:46:2.4988E-5:35:4:1:3:15 0/1:34:18:5:13:24:75%:77:1.8413E-8:37:6:0:6:24 1/1:36:9:6:3:10:90%:42:5.9538E-5:31:1:0:1:10 0/1:32:9:3:6:12:75%:37:1.6826E-4:37:3:1:2:13 0/1:35:21:16:5:24:87.5%:99:9.0704E-11:36:3:0:3:26 0/1:33:11:6:5:13:84.62%:49:1.0096E-5:32:2:1:1:15 0/1:34:11:3:8:16:68.75%:46:2.4988E-5:36:4:0:4:17 0/1:32:6:2:4:9:66.67%:23:4.5249E-3:36:3:1:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:33:16:6:10:23:69.57%:66:2.4726E-7:34:7:2:5:24 0/1:35:14:6:8:17:82.35%:63:4.8851E-7:38:3:0:3:19 0/1:33:16:7:9:22:72.73%:67:1.7905E-7:36:6:1:5:27 0/1:34:22:13:9:35:62.86%:87:1.7197E-9:37:13:3:10:38 0/1:33:13:4:9:17:76.47%:55:2.5647E-6:37:4:0:4:19 0/1:33:20:12:8:24:83.33%:91:6.3493E-10:37:4:1:3:25 0/1:35:11:4:7:14:78.57%:47:1.6951E-5:34:3:1:2:15 0/1:34:14:6:8:18:77.78%:60:8.0605E-7:42:4:2:2:24 0/1:35:14:4:10:16:87.5%:65:2.5454E-7:37:2:0:2:19 0/1:34:18:10:8:22:81.82%:81:7.1052E-9:36:4:0:4:27 0/1:35:13:6:7:20:65%:51:6.4422E-6:36:7:0:7:22 0/1:33:6:1:5:9:66.67%:23:4.5249E-3:36:3:1:2:12 0/1:33:14:7:7:16:87.5%:65:2.5454E-7:36:2:0:2:18 0/1:32:10:4:6:14:71.43%:41:7.6278E-5:38:4:0:4:14 0/1:35:13:6:7:18:72.22%:54:3.7078E-6:35:5:0:5:19 0/1:32:6:3:3:11:54.55%:22:6.192E-3:36:5:2:3:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:32:10:5:5:12:83.33%:44:3.3652E-5:35:2:0:2:15 0/1:31:11:6:5:15:73.33%:46:2.4988E-5:36:4:1:3:15 1/1:35:11:3:8:12:91.67%:53:4.8074E-6:33:1:0:1:15 0/1:34:6:4:2:8:75%:24:3.4965E-3:35:2:1:1:8 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:11 0/1:34:6:2:4:8:75%:24:3.4965E-3:37:2:1:1:10 0/1:33:6:5:1:9:66.67%:23:4.5249E-3:30:3:0:3:10 0/1:32:8:2:6:9:88.89%:36:2.0568E-4:27:1:0:1:12 0/1:34:8:5:3:10:80%:34:3.5723E-4:34:2:0:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:7:5:2:8:87.5%:31:6.993E-4:38:1:0:1:10 0/1:33:10:7:3:13:76.92%:42:5.3843E-5:34:3:1:2:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:33:13:10:3:16:81.25%:57:1.6121E-6:37:3:1:2:16 0/1:33:6:3:3:8:75%:24:3.4965E-3:37:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:32:9:4:5:11:81.82%:39:1.1057E-4:38:2:0:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:32:6:3:3:8:75%:24:3.4965E-3:36:2:0:2:9 0/1:35:8:5:3:12:66.67%:31:6.7304E-4:38:4:0:4:12 0/1:34:14:6:8:18:77.78%:60:8.0605E-7:36:4:0:4:18 0/1:37:11:5:6:14:78.57%:47:1.6951E-5:34:3:0:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 MTB_anc 3935494 . C A . PASS AC=1;AF=0.100;AN=10;ANN=A|missense_variant|MODERATE|PE_PGRS54_Rv3508|gene3581|transcript|Transcript_gene3581|Coding|1/1|c.4490C>A|p.Ala1497Asp|4490/5706|4490/5706|1497/1901||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3935494C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3935494C>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:33:7:0:7:8:87.5%:31:6.993E-4:28:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:36:3:0:3:13:23.08%:9:1.1E-1:34:10:2:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:37:2:0:2:8:25%:5:2.3333E-1:34:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:32:3:0:3:9:33.33%:4:1.0294E-1:32:6:3:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:33:1:0:1:7:14.29%:8:5E-1:31:6:1:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 3938279 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|ilvX_Rv3509c|gene3582|transcript|Transcript_gene3582|Coding|1/1|c.146G>A|p.Gly49Asp|146/1548|146/1548|49/515||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3938279C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3938279C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:46:47:19:28:48 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:47:0%:89:1E0:47:47:20:27:47 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:49:28:18:10:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:32 0/0:0:0:0:0:23:0%:44:1E0:48:23:9:14:25 0/0:0:0:0:0:40:0%:74:1E0:49:40:18:22:41 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:17:0%:33:1E0:52:17:10:7:18 0/0:0:0:0:0:53:0%:99:1E0:45:53:15:38:53 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:31 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:41 0/0:0:0:0:0:40:0%:74:1E0:44:40:16:24:42 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:15:24:40 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:7:16:23 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:34 0/0:37:1:1:0:38:2.63%:58:5E-1:51:37:23:14:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:24:0%:44:1E0:50:24:14:10:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:54:0%:99:1E0:47:54:20:34:54 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:45 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:42 0/0:0:0:0:0:34:0%:62:1E0:46:34:11:23:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:49:0%:93:1E0:46:49:22:27:49 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:32 0/0:0:0:0:0:46:0%:85:1E0:45:46:18:28:46 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:60:1:0:1:46:2.17%:73:5E-1:48:45:19:26:46 0/0:0:0:0:0:17:0%:33:1E0:53:17:6:11:18 1/1:41:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:53 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:42 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:45:0%:85:1E0:40:45:18:27:46 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:25:23:49 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:43 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:19 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:53:0%:99:1E0:46:53:25:28:53 0/0:0:0:0:0:30:0%:55:1E0:46:30:11:19:30 0/0:0:0:0:0:56:0%:99:1E0:45:56:21:35:58 0/0:60:1:1:0:25:4%:38:5E-1:50:24:12:12:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:28 0/0:0:0:0:0:25:0%:48:1E0:51:25:14:11:26 0/0:60:1:0:1:13:7.69%:18:5E-1:50:12:2:10:13 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:38 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:35 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:25 0/0:0:0:0:0:47:0%:89:1E0:42:47:18:29:47 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:38 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:28 0/0:38:1:1:0:48:2.08%:76:5E-1:44:47:18:29:49 0/0:0:0:0:0:39:0%:74:1E0:46:39:14:25:39 0/0:0:0:0:0:24:0%:44:1E0:47:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:42 0/0:0:0:0:0:28:0%:51:1E0:46:28:18:10:29 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:17 0/0:0:0:0:0:28:0%:51:1E0:54:28:17:11:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:23:0%:44:1E0:47:23:8:15:23 0/0:0:0:0:0:27:0%:52:1E0:52:27:12:15:27 0/0:0:0:0:0:41:0%:78:1E0:43:41:29:12:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:6:25:31 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:32 1/1:43:30:14:16:31:96.77%:99:6.8754E-17:38:1:1:0:31 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:20 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:29 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:41 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:37 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:7:20:28 0/0:0:0:0:0:61:0%:99:1E0:43:61:27:34:62 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:51 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:38 0/0:0:0:0:0:44:0%:81:1E0:40:44:16:28:47 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:41 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:43 0/0:0:0:0:0:49:0%:93:1E0:36:49:26:23:53 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:24 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:16:9:26 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:30 0/0:0:0:0:0:46:0%:85:1E0:36:46:22:24:48 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:49:0%:93:1E0:39:49:19:30:51 0/0:0:0:0:0:40:0%:74:1E0:43:40:14:26:42 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:38:1:0:1:43:2.33%:70:5E-1:45:42:22:20:43 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:41:0%:78:1E0:40:41:17:24:41 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:47 0/0:0:0:0:0:51:0%:97:1E0:43:51:20:31:52 0/0:0:0:0:0:33:0%:63:1E0:38:33:11:22:33 MTB_anc 3941365 . C CG . PASS AC=2;AF=6.667e-03;AN=300;ANN=CG|frameshift_variant|HIGH|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.1751dupG|p.Ala585fs|1752/2145|1752/2145|584/714||INFO_REALIGN_3_PRIME,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941365_3941366insG||||||,CG|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941365_3941366insG||||||;HOM=0;LOF=(PE_PGRS55_Rv3511|gene3584|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:59:0%:99:1E0:38:59:32:27:61 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:0:0:0:0:67:0%:99:1E0:39:67:36:31:68 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:36:34:19:15:34 0/0:0:0:0:0:19:0%:37:1E0:37:19:13:6:20 0/0:0:0:0:0:52:0%:96:1E0:39:52:33:19:53 0/0:0:0:0:0:28:0%:51:1E0:39:28:17:11:28 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:40 0/0:0:0:0:0:41:0%:78:1E0:38:41:26:15:41 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:22 0/0:0:0:0:0:45:0%:85:1E0:37:45:23:22:47 0/0:0:0:0:0:20:0%:36:1E0:40:20:12:8:23 0/0:0:0:0:0:48:0%:89:1E0:38:48:24:24:48 0/0:0:0:0:0:33:0%:63:1E0:37:33:20:13:33 0/0:0:0:0:0:27:0%:52:1E0:38:27:17:10:30 0/0:0:0:0:0:22:0%:40:1E0:35:22:14:8:22 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:19 0/0:0:0:0:0:12:0%:21:1E0:39:12:6:6:12 0/0:0:0:0:0:20:0%:36:1E0:38:20:9:11:21 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:24 0/0:0:0:0:0:39:0%:74:1E0:38:39:23:16:41 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:51:0%:97:1E0:39:51:30:21:56 0/0:0:0:0:0:38:0%:70:1E0:39:38:24:14:41 0/0:0:0:0:0:49:0%:93:1E0:40:49:32:17:52 0/0:0:0:0:0:26:0%:47:1E0:37:26:16:10:26 0/0:0:0:0:0:52:0%:96:1E0:39:52:29:23:56 0/0:0:0:0:0:43:0%:82:1E0:40:43:31:12:45 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:48 0/0:0:0:0:0:58:0%:99:1E0:39:58:35:23:64 0/0:0:0:0:0:51:0%:97:1E0:36:51:28:23:52 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:28 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:30 0/0:0:0:0:0:26:0%:47:1E0:36:26:18:8:27 0/0:0:0:0:0:55:0%:99:1E0:38:55:35:20:58 0/0:0:0:0:0:40:0%:74:1E0:38:40:26:14:40 0/0:0:0:0:0:83:0%:99:1E0:36:83:37:46:86 0/0:0:0:0:0:54:0%:99:1E0:37:54:26:28:55 0/0:0:0:0:0:55:0%:99:1E0:38:54:29:25:57 0/0:0:0:0:0:40:0%:74:1E0:36:40:20:20:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:27:14:45 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:32 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:35 0/0:0:0:0:0:49:0%:93:1E0:38:49:28:21:51 0/0:0:0:0:0:56:0%:99:1E0:38:56:37:19:59 0/0:0:0:0:0:42:0%:77:1E0:38:42:25:17:44 0/0:0:0:0:0:44:0%:81:1E0:41:44:29:15:48 0/0:0:0:0:0:39:0%:74:1E0:39:39:24:15:41 0/0:0:0:0:0:46:0%:85:1E0:37:46:24:22:47 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:21 0/0:0:0:0:0:56:0%:99:1E0:36:56:32:24:57 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:31 0/0:0:0:0:0:43:0%:82:1E0:37:43:26:17:44 0/0:0:0:0:0:43:0%:77:1E0:36:42:25:17:44 0/0:0:0:0:0:35:0%:67:1E0:35:35:19:16:37 0/0:0:0:0:0:23:0%:44:1E0:35:23:10:13:23 0/0:0:0:0:0:45:0%:85:1E0:36:45:25:20:47 0/0:0:0:0:0:45:0%:85:1E0:38:45:24:21:46 0/0:0:0:0:0:47:0%:89:1E0:38:47:21:26:49 0/0:0:0:0:0:44:0%:81:1E0:38:44:18:26:48 0/0:0:0:0:0:28:0%:51:1E0:38:28:13:15:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:32 0/0:0:0:0:0:58:0%:99:1E0:38:58:34:24:58 0/0:0:0:0:0:72:0%:99:1E0:38:72:41:31:75 0/0:0:0:0:0:30:0%:55:1E0:36:30:21:9:31 0/0:0:0:0:0:61:0%:99:1E0:37:61:35:26:64 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:25 0/0:0:0:0:0:10:0%:17:1E0:39:10:6:4:10 0/0:0:0:0:0:49:0%:93:1E0:36:49:22:27:51 0/0:0:0:0:0:39:0%:74:1E0:37:39:20:19:40 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:38 0/0:0:0:0:0:42:0%:77:1E0:36:42:20:22:42 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:38 0/0:0:0:0:0:40:0%:74:1E0:36:40:23:17:40 0/0:0:0:0:0:44:0%:81:1E0:40:44:28:16:48 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:36 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:34 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:29 0/0:26:1:1:0:64:1.56%:99:5E-1:39:63:40:23:66 0/0:0:0:0:0:41:0%:78:1E0:37:41:23:18:43 0/0:0:0:0:0:39:0%:74:1E0:37:39:17:22:40 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:22 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:35 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:30 0/0:0:0:0:0:13:0%:25:1E0:38:13:7:6:13 0/0:0:0:0:0:41:0%:78:1E0:38:41:25:16:42 0/0:0:0:0:0:26:0%:47:1E0:39:26:22:4:26 0/0:0:0:0:0:47:0%:89:1E0:37:47:28:19:48 0/0:0:0:0:0:33:0%:63:1E0:39:33:15:18:34 0/0:0:0:0:0:47:0%:89:1E0:39:47:21:26:48 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:56:0%:99:1E0:37:56:29:27:56 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:28 0/1:28:9:6:3:54:16.07%:28:1.3788E-3:37:47:30:17:58 0/0:0:0:0:0:45:0%:85:1E0:39:45:27:18:48 0/0:0:0:0:0:45:0%:85:1E0:38:45:21:24:47 0/0:0:0:0:0:51:0%:97:1E0:37:51:31:20:52 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:50 0/0:0:0:0:0:45:0%:85:1E0:36:45:28:17:45 0/0:0:0:0:0:30:0%:55:1E0:35:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:36:35:19:16:38 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:22 0/0:0:0:0:0:44:0%:81:1E0:36:44:17:27:45 0/0:0:0:0:0:36:0%:66:1E0:36:36:14:22:36 0/0:0:0:0:0:55:0%:99:1E0:38:55:25:30:56 0/0:0:0:0:0:49:0%:93:1E0:37:49:25:24:50 0/0:0:0:0:0:69:0%:99:1E0:37:69:38:31:71 0/0:0:0:0:0:49:0%:93:1E0:38:49:28:21:50 0/0:0:0:0:0:59:0%:99:1E0:38:59:36:23:63 0/0:0:0:0:0:33:0%:63:1E0:37:33:18:15:35 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:35 0/0:0:0:0:0:39:0%:74:1E0:36:39:22:17:43 0/0:0:0:0:0:41:0%:78:1E0:37:41:23:18:47 0/1:39:7:5:2:37:18.42%:22:5.7727E-3:36:31:16:15:44 0/0:0:0:0:0:51:0%:97:1E0:36:51:28:23:54 0/0:0:0:0:0:33:0%:63:1E0:35:33:15:18:34 0/0:0:0:0:0:37:0%:70:1E0:37:37:17:20:39 0/0:0:0:0:0:48:0%:89:1E0:36:48:24:24:48 0/0:0:0:0:0:43:0%:82:1E0:38:43:26:17:44 0/0:0:0:0:0:40:0%:74:1E0:36:40:20:20:42 0/0:0:0:0:0:37:0%:70:1E0:38:37:23:14:40 0/0:0:0:0:0:24:0%:44:1E0:35:24:12:12:26 0/0:0:0:0:0:39:0%:74:1E0:37:39:21:18:39 0/0:0:0:0:0:26:0%:47:1E0:35:26:10:16:27 0/0:0:0:0:0:35:0%:67:1E0:38:35:18:17:35 0/0:0:0:0:0:38:0%:70:1E0:38:38:17:21:41 0/0:0:0:0:0:31:0%:59:1E0:37:31:19:12:33 0/0:0:0:0:0:23:0%:44:1E0:35:23:13:10:24 0/0:0:0:0:0:30:0%:55:1E0:35:30:17:13:32 0/0:0:0:0:0:24:0%:44:1E0:34:24:13:11:24 0/0:0:0:0:0:31:0%:59:1E0:36:31:15:16:31 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:20 0/0:0:0:0:0:40:0%:74:1E0:37:40:23:17:41 0/0:0:0:0:0:42:0%:77:1E0:37:42:22:20:42 0/0:0:0:0:0:40:0%:74:1E0:37:40:21:19:40 0/0:38:1:1:0:34:2.94%:51:5E-1:39:33:17:16:39 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:38 0/0:0:0:0:0:27:0%:52:1E0:37:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:29 0/0:0:0:0:0:28:0%:51:1E0:36:28:13:15:28 0/0:0:0:0:0:44:0%:81:1E0:37:44:23:21:45 0/0:0:0:0:0:46:0%:85:1E0:36:46:26:20:46 0/0:0:0:0:0:18:0%:32:1E0:37:18:5:13:18 0/0:0:0:0:0:35:0%:67:1E0:36:35:17:18:36 0/0:0:0:0:0:41:0%:78:1E0:37:41:20:21:43 0/0:0:0:0:0:62:0%:99:1E0:38:62:33:29:63 0/0:0:0:0:0:35:0%:67:1E0:37:35:23:12:37 MTB_anc 3941424 . G A . PASS AC=298;AF=1.00;AN=298;ANN=A|missense_variant|MODERATE|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.1808G>A|p.Gly603Asp|1808/2145|1808/2145|603/714||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941424G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941424G>A||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:35:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:48 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:32:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:38 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:34:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:28 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:35:30:6:24:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:32:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:35:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:34:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:42 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:35:24:11:13:24:100%:99:3.101E-14:0:0:0:0:35 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:36:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:36 1/1:34:26:7:19:27:96.3%:99:1.4382E-14:26:1:0:1:31 1/1:34:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:35:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:34:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:35:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:44:5:39:44:100%:99:3.8097E-26:0:0:0:0:52 1/1:34:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:44 1/1:34:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:41 1/1:36:22:7:15:23:95.65%:99:2.9149E-12:36:1:0:1:26 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:35 1/1:36:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:35:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:35:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:35:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:26 1/1:34:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:35:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:11 1/1:35:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:34:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:33:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:21 1/1:36:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:36:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:34:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:34:30:5:25:30:100%:99:8.4556E-18:0:0:0:0:35 1/1:35:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:34:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:35:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:36:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:45 1/1:35:12:4:8:12:100%:64:3.698E-7:0:0:0:0:15 1/1:36:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:33:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:36:24:5:19:24:100%:99:3.101E-14:0:0:0:0:30 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:26 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:22 1/1:33:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:33 1/1:36:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:33:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:35:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:38:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:11 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:23 1/1:36:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:33:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:20 1/1:35:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:23 1/1:36:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:33:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:35:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:57 1/1:35:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:40 1/1:35:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:36:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:40 1/1:35:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:37 1/1:36:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:35:24:9:15:24:100%:99:3.101E-14:0:0:0:0:32 1/1:34:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:30 1/1:32:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:37:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:36:49:19:30:49:100%:99:3.925E-29:0:0:0:0:59 1/1:34:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:49 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:35:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:33 1/1:35:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:34:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:35:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:36:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:34:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:35:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:34:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:18 1/1:35:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:34:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:34:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:32:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:37 1/1:36:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:33:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:36:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:27 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:36:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:36:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:39 1/1:34:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:40 1/1:35:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:24 MTB_anc 3941497 . C G . PASS AC=292;AF=1.00;AN=292;ANN=G|synonymous_variant|LOW|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.1881C>G|p.Gly627Gly|1881/2145|1881/2145|627/714||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941497C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941497C>G||||||;HET=0;WT=0;set=filterInvariant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:26:1:25:27:100%:99:2.0165E-15:0:0:0:0:30 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:21:2:19:22:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:8:1:7:9:100%:41:7.77E-5:0:0:0:0:10 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:27:1:26:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:32:5:27:33:100%:99:5.4567E-19:0:0:0:0:34 1/1:34:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:15:3:12:16:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:24:6:18:25:100%:99:3.101E-14:0:0:0:0:26 1/1:33:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:33:17:1:16:18:100%:93:4.2852E-10:0:0:0:0:19 1/1:34:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:33:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:35:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:10:2:8:11:100%:52:5.4125E-6:0:0:0:0:11 1/1:33:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:29:4:25:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:37:3:34:38:100%:99:5.7269E-22:0:0:0:0:41 1/1:35:28:2:26:29:100%:99:1.3074E-16:0:0:0:0:30 1/1:34:34:2:32:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:16:4:12:17:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:33:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:33:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:21:1:20:22:100%:99:1.8578E-12:0:0:0:0:25 1/1:35:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:21:3:18:22:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:24:5:19:26:100%:99:3.101E-14:0:0:0:0:27 1/1:34:25:5:20:26:100%:99:7.9107E-15:0:0:0:0:31 1/1:33:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:33:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:24:3:21:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:31:4:27:32:100%:99:2.1486E-18:0:0:0:0:34 1/1:34:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:19:3:16:20:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:33:3:30:34:100%:99:1.3852E-19:0:0:0:0:37 1/1:35:34:4:30:35:100%:99:3.5146E-20:0:0:0:0:37 1/1:34:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:29:3:26:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:34:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:23:3:20:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:34:24:4:20:25:100%:99:3.101E-14:0:0:0:0:26 1/1:33:9:2:7:10:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:33:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:14:1:13:15:100%:76:2.4927E-8:0:0:0:0:16 1/1:33:13:1:12:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:26:1:25:27:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:33:9:1:8:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:37:13:4:9:14:100%:70:9.6148E-8:0:0:0:0:15 1/1:33:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:34:17:2:15:18:100%:93:4.2852E-10:0:0:0:0:21 1/1:36:44:8:36:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:34:12:2:10:13:100%:64:3.698E-7:0:0:0:0:15 1/1:36:20:3:17:21:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:22:1:21:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:34:28:0:28:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:30:4:26:31:100%:99:8.4556E-18:0:0:0:0:32 1/1:34:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:34:26:7:19:28:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:34:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:28:3:25:29:100%:99:1.3074E-16:0:0:0:0:30 1/1:37:9:2:7:10:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:30:3:27:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:22:1:21:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:34:42:4:38:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:34:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:22:1:21:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:33:11:1:10:13:100%:58:1.4176E-6:0:0:0:0:15 1/1:35:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:34:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:34:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:29:3:26:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:32:16:6:10:17:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:35:6:29:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:34:22:1:21:23:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:9:2:7:10:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:11:1:10:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:8:1:7:9:100%:41:7.77E-5:0:0:0:0:9 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:14:0:14:15:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:19:0:19:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:33:9:1:8:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:16:3:13:17:94.12%:81:7.7134E-9:31:1:1:0:17 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:14:1:13:15:100%:76:2.4927E-8:0:0:0:0:15 1/1:33:18:2:16:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:34:14:1:13:15:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:30:2:28:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:35:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:18 MTB_anc 3941515 . G A . PASS AC=5;AF=0.018;AN=280;ANN=A|synonymous_variant|LOW|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.1899G>A|p.Gly633Gly|1899/2145|1899/2145|633/714||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941515G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941515G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:35:1:0:1:26:4%:38:5E-1:35:24:0:24:28 0/0:0:0:0:0:8:0%:14:1E0:35:8:1:7:9 0/0:0:0:0:0:22:0%:40:1E0:37:21:1:20:24 0/0:35:3:1:2:13:23.08%:9:1.1E-1:35:10:1:9:13 0/0:0:0:0:0:10:0%:17:1E0:34:10:0:10:10 0/0:0:0:0:0:7:0%:14:1E0:35:7:1:6:7 0/0:38:1:0:1:28:3.57%:41:5E-1:36:27:1:26:28 0/0:34:1:1:0:11:10%:11:5E-1:32:9:0:9:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:0:11:11 0/0:34:2:1:1:23:8.7%:28:2.4444E-1:36:21:4:17:23 0/0:34:1:0:1:13:7.69%:18:5E-1:35:12:2:10:14 0/0:34:2:0:2:26:7.69%:30:2.451E-1:34:24:0:24:27 0/0:30:1:0:1:12:8.33%:14:5E-1:36:10:0:10:12 0/0:35:1:0:1:26:4%:38:5E-1:35:24:1:23:27 0/0:34:3:0:3:15:20%:11:1.1207E-1:36:12:0:12:15 0/0:0:0:0:0:19:0%:32:1E0:34:18:3:15:19 0/0:0:0:0:0:9:0%:18:1E0:35:9:0:9:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:1:0:1:7:14.29%:8:5E-1:35:6:1:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:2:0:2:10:20%:7:2.3684E-1:35:8:0:8:10 0/0:37:2:0:2:19:10.53%:21:2.4324E-1:34:17:0:17:19 0/0:34:1:1:0:12:8.33%:14:5E-1:34:11:0:11:12 0/0:0:0:0:0:21:0%:36:1E0:35:20:5:15:21 0/0:34:5:4:1:18:27.78%:8:2.2727E-2:35:13:0:13:18 0/0:34:2:1:1:17:12.5%:15:2.4194E-1:34:14:2:12:17 0/0:37:1:0:1:12:8.33%:14:5E-1:34:11:0:11:14 0/0:0:0:0:0:12:0%:21:1E0:34:12:1:11:13 0/0:33:4:2:2:19:21.05%:10:5.1948E-2:36:14:2:12:20 0/0:31:5:1:4:21:23.81%:12:2.3921E-2:35:16:1:15:22 0/0:35:1:0:1:17:5.88%:24:5E-1:34:16:0:16:18 0/0:47:2:1:1:17:11.76%:18:2.4242E-1:35:15:0:15:17 0/0:0:0:0:0:12:0%:21:1E0:35:12:0:12:12 0/0:0:0:0:0:10:0%:18:1E0:36:9:0:9:10 0/0:35:1:0:1:7:14.29%:8:5E-1:34:6:0:6:9 0/0:33:4:1:3:25:16%:21:5.4928E-2:35:21:1:20:26 0/0:31:6:1:5:20:30%:7:1.0098E-2:35:14:1:13:20 0/0:34:5:0:5:36:14.29%:30:2.6822E-2:36:30:1:29:36 0/0:32:1:1:0:31:3.33%:44:5E-1:35:29:3:26:31 0/0:33:4:2:2:40:10%:40:5.7784E-2:34:36:2:34:41 0/0:31:4:1:3:14:28.57%:6:4.8889E-2:34:10:0:10:14 0/0:48:2:0:2:16:13.33%:16:2.4138E-1:34:13:1:12:16 0/0:35:1:0:1:10:10%:11:5E-1:35:9:1:8:11 0/0:34:2:2:0:15:13.33%:16:2.4138E-1:35:13:0:13:16 0/0:0:0:0:0:14:0%:25:1E0:36:14:1:13:14 0/0:0:0:0:0:19:0%:37:1E0:33:19:1:18:21 0/0:32:1:0:1:11:9.09%:11:5E-1:38:9:1:8:12 0/0:60:1:0:1:21:4.76%:31:5E-1:34:20:3:17:22 0/0:0:0:0:0:17:0%:33:1E0:35:17:2:15:17 0/0:34:4:1:3:23:18.18%:15:5.3885E-2:36:18:2:16:24 0/0:35:1:0:1:14:7.14%:17:5E-1:34:13:1:12:14 0/0:34:1:0:1:24:4.35%:34:5E-1:35:22:3:19:24 0/0:0:0:0:0:11:0%:22:1E0:35:11:1:10:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:0:1:19:5.56%:24:5E-1:35:17:2:15:19 0/1:34:7:1:6:24:30.43%:23:4.5803E-3:35:16:1:15:26 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:9 0/0:0:0:0:0:10:0%:17:1E0:34:10:0:10:10 0/0:37:1:0:1:22:4.55%:31:5E-1:37:21:0:21:23 0/0:36:2:0:2:31:6.67%:34:2.4545E-1:35:26:1:25:32 0/0:0:0:0:0:19:0%:37:1E0:35:19:0:19:21 0/0:34:1:1:0:21:5%:27:5E-1:35:19:1:18:22 0/0:34:1:1:0:12:8.33%:14:5E-1:35:11:1:10:12 0/0:36:2:0:2:11:18.18%:10:2.381E-1:36:9:0:9:11 0/0:34:4:1:3:37:11.11%:34:5.7257E-2:34:32:5:27:38 0/0:32:3:1:2:38:8.11%:43:1.1986E-1:35:34:3:31:38 0/1:34:7:1:6:18:38.89%:24:3.8123E-3:34:11:0:11:19 0/0:32:1:0:1:28:3.57%:41:5E-1:35:27:0:27:28 0/0:0:0:0:0:10:0%:17:1E0:36:10:0:10:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:33:5:2:3:28:17.86%:19:2.5729E-2:35:23:0:23:28 0/0:35:4:1:3:23:18.18%:15:5.3885E-2:35:18:0:18:23 0/0:35:1:0:1:13:8.33%:14:5E-1:34:11:1:10:13 0/0:0:0:0:0:14:0%:25:1E0:35:14:0:14:15 0/0:32:4:1:3:18:22.22%:10:5.1948E-2:35:14:0:14:19 0/0:35:1:0:1:18:5.56%:24:5E-1:34:17:0:17:18 0/1:38:7:2:5:25:28%:23:4.8126E-3:35:18:1:17:26 0/0:35:1:0:1:16:6.25%:21:5E-1:36:15:1:14:16 0/0:0:0:0:0:16:0%:29:1E0:35:15:1:14:16 0/0:37:1:0:1:12:9.09%:14:5E-1:35:10:1:9:12 0/0:34:1:0:1:12:8.33%:14:5E-1:34:11:1:10:12 0/0:35:3:0:3:28:10.71%:28:1.1818E-1:35:25:1:24:31 0/0:30:2:0:2:18:11.11%:18:2.4286E-1:35:16:0:16:18 0/0:37:1:0:1:12:8.33%:14:5E-1:36:11:1:10:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:33:3:1:2:16:18.75%:11:1.129E-1:35:13:2:11:17 0/0:0:0:0:0:9:0%:14:1E0:34:8:0:8:9 0/0:33:1:0:1:16:6.25%:21:5E-1:35:15:3:12:17 0/0:0:0:0:0:13:0%:21:1E0:35:12:2:10:13 0/0:35:1:0:1:18:5.56%:24:5E-1:34:17:0:17:19 0/0:34:2:1:1:8:25%:5:2.3333E-1:37:6:0:6:8 0/0:24:1:0:1:15:6.67%:21:5E-1:35:14:2:12:15 0/0:38:1:0:1:19:5.56%:24:5E-1:33:17:1:16:19 0/0:46:2:0:2:40:5%:53:2.4684E-1:35:38:4:34:41 0/0:0:0:0:0:12:0%:22:1E0:35:11:1:10:13 0/0:32:2:0:2:19:11.11%:18:2.4286E-1:35:16:1:15:20 0/0:34:2:0:2:16:12.5%:15:2.4194E-1:36:14:0:14:19 0/0:34:2:0:2:28:7.14%:34:2.4545E-1:34:26:0:26:28 0/0:33:3:1:2:29:10.71%:28:1.1818E-1:35:25:1:24:31 0/1:33:8:3:5:21:38.1%:27:1.7241E-3:36:13:1:12:21 0/0:33:6:3:3:27:23.08%:13:1.1309E-2:35:20:2:18:27 0/0:0:0:0:0:15:0%:29:1E0:34:15:0:15:17 0/0:0:0:0:0:8:0%:14:1E0:34:8:0:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:5:0:5:30:17.24%:22:2.5917E-2:35:24:2:22:30 0/0:30:1:0:1:11:10%:11:5E-1:35:9:1:8:11 0/0:0:0:0:0:29:0%:55:1E0:34:29:2:27:29 0/0:33:1:0:1:22:4.55%:31:5E-1:35:21:2:19:23 0/0:28:5:1:4:37:13.51%:32:2.706E-2:34:32:0:32:38 0/0:34:5:1:4:26:19.23%:17:2.531E-2:35:21:3:18:27 0/0:24:1:0:1:21:4.76%:31:5E-1:35:20:1:19:23 0/0:0:0:0:0:12:0%:17:1E0:36:10:0:10:13 0/0:33:3:1:2:20:15%:16:1.1538E-1:37:17:0:17:20 0/0:33:4:1:3:20:20%:13:5.3015E-2:35:16:1:15:21 0/0:0:0:0:0:16:0%:29:1E0:33:16:2:14:17 0/0:33:4:0:4:14:28.57%:6:4.8889E-2:35:10:1:9:14 0/0:0:0:0:0:23:0%:44:1E0:35:23:2:21:25 0/0:35:1:0:1:14:7.69%:18:5E-1:34:12:1:11:14 0/0:37:2:0:2:21:9.52%:25:2.439E-1:36:19:2:17:23 0/0:32:4:1:3:27:14.81%:23:5.5494E-2:36:23:1:22:29 0/0:37:5:0:5:23:22.73%:12:2.4248E-2:35:17:1:16:24 0/0:0:0:0:0:10:0%:18:1E0:34:9:0:9:10 0/0:36:2:0:2:14:15.38%:13:2.4E-1:35:11:1:10:15 0/0:34:2:1:1:9:25%:5:2.3333E-1:34:6:0:6:10 0/0:37:1:0:1:11:9.09%:14:5E-1:34:10:1:9:12 0/0:0:0:0:0:13:0%:25:1E0:35:13:1:12:14 0/0:0:0:0:0:15:0%:25:1E0:35:14:0:14:15 0/0:35:1:0:1:21:4.76%:31:5E-1:36:20:0:20:21 0/0:0:0:0:0:17:0%:33:1E0:34:17:2:15:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:32:1:0:1:14:7.14%:17:5E-1:35:13:0:13:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:30:2:0:2:14:14.29%:12:2.4074E-1:35:12:1:11:14 0/0:60:1:0:1:9:11.11%:11:5E-1:35:8:1:7:9 0/0:32:1:0:1:15:6.67%:21:5E-1:35:14:1:13:15 0/0:0:0:0:0:14:0%:25:1E0:36:14:0:14:14 0/0:36:3:1:2:17:17.65%:14:1.1364E-1:35:14:1:13:18 0/0:35:2:0:2:12:18.18%:10:2.381E-1:36:9:1:8:12 0/0:33:2:0:2:19:11.11%:18:2.4286E-1:35:16:1:15:20 0/0:0:0:0:0:18:0%:32:1E0:35:18:1:17:21 0/0:0:0:0:0:15:0%:25:1E0:35:14:0:14:16 0/0:25:1:0:1:11:9.09%:14:5E-1:36:10:2:8:13 0/0:32:1:0:1:18:5.56%:24:5E-1:35:17:5:12:18 0/0:30:2:0:2:17:11.76%:18:2.4242E-1:35:15:0:15:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:33:1:0:1:18:5.56%:24:5E-1:35:17:2:15:19 0/0:31:3:0:3:25:12%:25:1.1735E-1:36:22:4:18:25 0/1:33:7:1:6:28:25%:22:5.1054E-3:36:21:2:19:29 0/0:34:3:1:2:14:21.43%:9:1.1111E-1:37:11:0:11:15 MTB_anc 3941516 . G A . PASS AC=3;AF=0.075;AN=40;ANN=A|missense_variant|MODERATE|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.1900G>A|p.Ala634Thr|1900/2145|1900/2145|634/714||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941516G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941516G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:36:7:1:6:18:38.89%:25:2.6087E-3:36:6:0:6:19 ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:38:6:2:4:24:24%:20:9.828E-3:36:13:0:13:26 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:32:8:4:4:21:38.1%:28:1.5455E-3:35:11:1:10:22 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/0:29:4:0:4:13:30.77%:4:4.6584E-2:35:8:1:7:14 ./. ./. 0/0:37:5:0:5:22:23.81%:8:2.2239E-2:34:12:1:11:24 0/0:27:3:0:3:9:33.33%:4:1.0294E-1:35:6:0:6:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:34:3:0:3:12:25%:4:1.0526E-1:32:7:0:7:13 ./. 0/0:30:4:0:4:13:30.77%:6:4.7826E-2:35:9:0:9:15 0/0:35:5:0:5:21:23.81%:10:2.3562E-2:36:15:0:15:21 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:34:5:0:5:12:41.67%:3:1.7544E-2:35:6:0:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:27:3:0:3:12:23.08%:6:1.087E-1:35:9:1:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./. 0/0:34:2:0:2:15:13.33%:12:2.4074E-1:36:12:0:12:15 0/0:35:3:1:2:17:17.65%:11:1.1207E-1:36:12:1:11:17 0/0:31:2:0:2:12:18.18%:7:2.3684E-1:35:8:1:7:12 ./. 0/0:35:4:0:4:22:18.18%:15:5.3471E-2:33:17:1:16:22 0/0:37:3:0:3:15:21.43%:9:1.1E-1:36:10:0:10:16 0/0:33:5:0:5:12:41.67%:3:1.8634E-2:35:7:3:4:13 ./. 0/0:34:5:0:5:19:26.32%:6:2.1073E-2:36:10:0:10:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. 0/0:36:6:0:6:27:22.22%:9:1.057E-2:36:16:2:14:29 0/0:35:4:0:4:14:28.57%:4:4.6584E-2:37:8:0:8:15 MTB_anc 3941516 . G GCCGGCGGAA . PASS AC=61;AF=0.242;AN=252;ANN=GCCGGCGGAA|inframe_insertion|MODERATE|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.1909_1917dupACCGGCGGA|p.Thr637_Gly639dup|1918/2145|1918/2145|640/714||INFO_REALIGN_3_PRIME,GCCGGCGGAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941516_3941517insCCGGCGGAA||||||,GCCGGCGGAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941516_3941517insCCGGCGGAA||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:33:12:1:11:27:44.44%:43:4.6796E-5:36:14:0:14:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:33:14:1:13:22:60.87%:54:3.4067E-6:36:9:0:9:24 0/0:34:3:1:2:14:21.43%:6:1.087E-1:36:9:2:7:14 0/1:31:6:0:6:10:60%:22:5.418E-3:37:4:0:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:34:18:1:17:28:64.29%:73:4.8354E-8:37:9:0:9:28 0/0:35:3:0:3:11:30%:4:1.0294E-1:33:6:0:6:11 0/0:36:4:0:4:10:40%:3:4.3344E-2:35:6:0:6:11 0/1:35:7:0:7:23:30.43%:23:4.3101E-3:35:14:4:10:23 0/0:34:5:1:4:13:38.46%:3:1.8634E-2:36:7:1:6:14 0/1:34:10:0:10:26:38.46%:34:3.1821E-4:35:15:0:15:27 0/0:32:1:0:1:11:9.09%:14:5E-1:36:10:0:10:12 0/1:34:7:0:7:27:26.92%:23:4.8126E-3:35:18:1:17:27 0/1:36:6:0:6:14:42.86%:21:6.865E-3:35:6:0:6:15 0/1:28:6:0:6:17:33.33%:20:9.5308E-3:35:12:3:9:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:32:2:1:1:8:25%:5:2.3333E-1:35:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:28:7:0:7:17:36.84%:24:3.6151E-3:36:10:0:10:19 0/1:27:7:0:7:11:58.33%:27:1.935E-3:37:4:0:4:12 0/0:34:5:2:3:20:25%:10:2.3166E-2:37:14:3:11:22 0/0:35:4:4:0:16:23.53%:8:4.9808E-2:34:11:0:11:18 0/1:35:6:1:5:14:46.15%:21:6.865E-3:35:6:1:5:17 0/1:27:6:0:6:13:42.86%:21:7.4534E-3:37:7:0:7:14 0/0:28:5:1:4:12:38.46%:4:1.9565E-2:34:8:0:8:13 0/0:33:3:2:1:17:16.67%:11:1.1207E-1:38:12:2:10:20 0/0:33:3:1:2:19:15.79%:14:1.1429E-1:36:15:2:13:21 0/1:27:8:0:8:16:44.44%:28:1.3389E-3:34:9:1:8:18 0/0:30:5:0:5:17:29.41%:6:2.1073E-2:35:10:0:10:17 0/1:35:6:0:6:12:50%:21:6.865E-3:35:6:0:6:12 0/0:31:3:0:3:10:33.33%:4:1.0294E-1:33:6:0:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:8:0:8:26:30.77%:27:1.8042E-3:35:14:1:13:27 0/0:30:4:1:3:19:21.05%:11:5.132E-2:35:13:2:11:21 0/1:35:11:0:11:35:32.35%:37:1.594E-4:35:19:1:18:36 0/1:35:9:0:9:31:30%:30:9.4048E-4:36:20:3:17:31 0/1:31:10:0:10:40:24.39%:33:4.7404E-4:35:26:2:24:42 0/0:30:3:1:2:12:25%:4:1.0294E-1:36:6:0:6:14 0/1:30:7:1:6:15:46.67%:25:2.6087E-3:35:6:1:5:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:35:3:0:3:15:20%:9:1.1E-1:33:10:0:10:16 0/0:33:2:0:2:15:13.33%:16:2.4138E-1:36:13:2:11:15 0/1:25:8:0:8:16:42.11%:28:1.5455E-3:35:11:1:10:20 0/0:35:3:1:2:11:27.27%:4:1.0294E-1:37:6:1:5:12 0/0:25:5:0:5:18:26.32%:8:2.2727E-2:35:13:2:11:21 0/0:26:4:0:4:16:23.53%:11:5.132E-2:35:13:2:11:17 0/0:33:4:1:3:24:17.39%:13:5.3015E-2:34:16:2:14:25 0/1:33:7:1:6:13:53.85%:25:2.6087E-3:35:6:0:6:14 0/1:30:12:1:11:23:52.17%:45:3.066E-5:35:10:2:8:24 0/0:35:5:0:5:11:45.45%:3:1.7544E-2:33:6:1:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:35:5:0:5:19:27.78%:6:2.1691E-2:35:11:2:9:19 0/1:33:6:0:6:22:28.57%:20:8.837E-3:36:10:1:9:26 0/1:34:6:1:5:10:60%:23:4.5249E-3:31:3:0:3:10 0/0:37:1:0:1:9:11.11%:11:5E-1:34:8:0:8:10 0/1:37:10:0:10:22:45.45%:36:2.3971E-4:34:11:0:11:23 0/1:31:8:1:7:30:26.67%:26:2.1337E-3:36:19:1:18:32 0/1:34:8:0:8:18:42.11%:28:1.4461E-3:35:10:0:10:19 0/1:31:9:1:8:21:42.86%:32:6.1425E-4:36:11:0:11:22 0/0:36:2:0:2:12:16.67%:10:2.381E-1:35:9:1:8:12 0/0:29:2:0:2:11:18.18%:7:2.3529E-1:36:7:0:7:11 0/1:33:13:1:12:36:37.14%:45:2.6443E-5:35:19:4:15:38 0/1:33:14:2:12:37:38.89%:49:1.1295E-5:36:20:1:19:38 ./. 0/0:34:6:0:6:28:21.43%:13:1.1309E-2:36:20:0:20:28 0/0:33:2:1:1:12:16.67%:7:2.3684E-1:35:8:0:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:5:0:5:26:19.23%:12:2.4248E-2:35:17:1:16:29 0/0:34:4:0:4:20:21.05%:8:5.0612E-2:35:12:0:12:22 0/0:28:3:0:3:12:25%:7:1.0714E-1:34:8:1:7:13 0/1:35:6:0:6:14:42.86%:20:7.971E-3:36:8:0:8:15 0/0:35:4:0:4:18:22.22%:8:4.9808E-2:36:11:0:11:19 0/0:36:2:0:2:18:11.11%:18:2.4242E-1:34:15:0:15:18 ./. 0/1:36:9:0:9:15:60%:35:2.8986E-4:37:5:1:4:16 0/0:27:3:0:3:13:23.08%:9:1.1E-1:35:10:1:9:15 0/0:33:2:1:1:13:16.67%:10:2.381E-1:35:9:0:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:11 0/1:29:11:0:11:27:37.93%:38:1.362E-4:35:16:1:15:32 0/0:37:1:0:1:16:5.88%:21:5E-1:35:15:0:15:18 0/0:34:4:0:4:12:33.33%:4:4.5113E-2:36:7:1:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:33:9:1:8:16:56.25%:35:2.8986E-4:36:5:1:4:17 0/0:35:2:0:2:9:25%:5:2.3333E-1:36:6:0:6:9 0/1:28:8:0:8:15:47.06%:29:1.2236E-3:34:8:3:5:17 0/0:34:5:0:5:13:41.67%:3:1.8634E-2:36:7:2:5:13 0/1:30:7:0:7:17:38.89%:24:3.3988E-3:34:9:0:9:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:34:3:0:3:14:21.43%:9:1.1111E-1:36:11:2:9:15 0/1:25:8:1:7:16:44.44%:28:1.3389E-3:36:9:0:9:19 0/1:34:16:1:15:40:39.02%:56:2.0535E-6:37:22:3:19:41 0/0:32:4:0:4:13:33.33%:4:4.6584E-2:35:8:1:7:13 0/1:34:7:0:7:18:41.18%:24:3.3988E-3:34:9:1:8:20 0/1:34:6:0:6:18:33.33%:20:8.4291E-3:35:9:0:9:18 0/1:30:10:0:10:25:38.46%:35:2.9985E-4:36:14:0:14:28 0/1:27:10:0:10:28:33.33%:34:3.3576E-4:35:16:1:15:31 ./. 0/0:35:5:3:2:24:21.74%:8:2.2727E-2:35:13:2:11:27 0/1:31:8:0:8:15:50%:29:1.2236E-3:34:8:1:7:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:33:4:0:4:26:14.81%:18:5.461E-2:35:20:1:19:29 0/1:34:6:1:5:11:60%:23:4.5249E-3:37:3:0:3:11 0/1:26:7:0:7:26:25%:22:5.1054E-3:35:21:2:19:29 0/0:31:5:0:5:22:22.73%:12:2.3921E-2:35:16:2:14:22 0/1:32:10:0:10:34:28.57%:33:4.259E-4:35:22:0:22:38 0/1:34:9:1:8:27:33.33%:31:7.0165E-4:35:13:2:11:27 0/1:30:9:0:9:21:40.91%:31:7.0165E-4:35:13:1:12:23 0/0:35:3:0:3:14:25%:7:1.0714E-1:34:8:0:8:14 0/0:35:2:1:1:18:11.11%:18:2.4242E-1:36:15:0:15:19 0/0:33:5:0:5:20:25%:6:2.1691E-2:35:11:1:10:21 0/1:31:9:0:9:16:52.94%:33:4.6348E-4:33:8:2:6:17 0/0:30:3:0:3:13:23.08%:6:1.087E-1:36:9:1:8:14 0/1:33:11:1:10:24:45.83%:39:1.1047E-4:35:13:1:12:25 0/0:29:4:0:4:13:30.77%:4:4.6584E-2:35:8:1:7:14 0/1:31:9:1:8:22:39.13%:31:6.592E-4:36:12:1:11:23 0/1:36:13:1:12:27:48.15%:48:1.4654E-5:36:12:0:12:29 0/0:37:5:0:5:22:23.81%:8:2.2239E-2:34:12:1:11:24 0/0:27:3:0:3:9:33.33%:4:1.0294E-1:35:6:0:6:10 0/1:32:7:1:6:15:50%:26:2.2883E-3:37:5:0:5:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:34:3:0:3:12:25%:4:1.0526E-1:32:7:0:7:13 0/1:32:6:0:6:13:46.15%:21:7.4534E-3:37:7:0:7:14 0/0:30:4:0:4:13:30.77%:6:4.7826E-2:35:9:0:9:15 0/0:35:5:0:5:21:23.81%:10:2.3562E-2:36:15:0:15:21 0/1:30:6:0:6:17:35.29%:20:8.837E-3:35:10:2:8:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:34:5:0:5:12:41.67%:3:1.7544E-2:35:6:0:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:27:3:0:3:12:23.08%:6:1.087E-1:35:9:1:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:32:8:0:8:13:57.14%:30:8.238E-4:35:5:1:4:15 0/0:34:2:0:2:15:13.33%:12:2.4074E-1:36:12:0:12:15 0/0:35:3:1:2:17:17.65%:11:1.1207E-1:36:12:1:11:17 0/0:31:2:0:2:12:18.18%:7:2.3684E-1:35:8:1:7:12 0/1:33:9:0:9:20:47.37%:33:4.6348E-4:37:8:1:7:21 0/0:35:4:0:4:22:18.18%:15:5.3471E-2:33:17:1:16:22 0/0:37:3:0:3:15:21.43%:9:1.1E-1:36:10:0:10:16 0/0:33:5:0:5:12:41.67%:3:1.8634E-2:35:7:3:4:13 0/1:32:6:1:5:16:35.29%:20:8.4291E-3:34:9:4:5:18 0/0:34:5:0:5:19:26.32%:6:2.1073E-2:36:10:0:10:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:31:6:0:6:17:31.58%:20:8.837E-3:35:10:2:8:19 0/1:37:7:0:7:22:31.82%:23:4.158E-3:36:13:4:9:24 0/0:36:6:0:6:27:22.22%:9:1.057E-2:36:16:2:14:29 0/0:35:4:0:4:14:28.57%:4:4.6584E-2:37:8:0:8:15 MTB_anc 3941568 . A C . PASS AC=100;AF=0.338;AN=296;ANN=C|missense_variant|MODERATE|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.1952A>C|p.Asn651Thr|1952/2145|1952/2145|651/714||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941568A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941568A>C||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:11:0:11:39:28.95%:36:2.1011E-4:38:27:6:21:41 0/0:36:3:1:2:9:33.33%:4:1.0294E-1:38:6:1:5:9 0/1:36:9:1:8:33:28.12%:29:1.0185E-3:38:23:8:15:37 0/1:37:6:3:3:12:50%:21:6.865E-3:47:6:2:4:12 0/0:35:4:1:3:28:14.81%:23:5.5494E-2:38:23:8:15:29 0/0:34:1:0:1:12:8.33%:14:5E-1:39:11:2:9:12 0/1:37:7:1:6:36:20.59%:22:5.5492E-3:38:27:8:19:39 0/1:35:6:0:6:15:40%:20:8.4291E-3:36:9:3:6:17 0/1:37:6:1:5:16:37.5%:20:8.837E-3:37:10:2:8:18 0/1:37:13:5:8:32:41.94%:46:2.4825E-5:40:18:4:14:35 0/1:36:7:1:6:22:35%:23:4.158E-3:36:13:3:10:22 0/1:35:12:1:11:38:33.33%:40:8.1472E-5:39:24:6:18:39 0/1:36:8:0:8:17:47.06%:28:1.3389E-3:39:9:5:4:18 0/1:36:14:1:13:37:40%:49:1.2005E-5:36:21:2:19:37 0/0:43:6:2:4:22:27.27%:9:1.057E-2:35:16:2:14:25 0/1:37:13:4:9:24:54.17%:48:1.2938E-5:41:11:1:10:26 0/0:37:4:1:3:17:23.53%:11:5.132E-2:34:13:5:8:17 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:46:7:4:3:11 0/1:41:6:3:3:16:40%:20:8.4291E-3:38:9:3:6:16 0/0:36:3:1:2:13:25%:6:1.087E-1:40:9:2:7:15 0/1:36:6:0:6:16:37.5%:20:8.837E-3:36:10:3:7:16 0/1:35:16:4:12:35:47.06%:58:1.4997E-6:36:18:5:13:37 0/0:36:2:0:2:20:10%:21:2.4359E-1:36:18:4:14:22 0/1:37:9:2:7:27:34.62%:30:8.4928E-4:37:17:2:15:29 0/1:37:13:2:11:40:33.33%:44:3.6837E-5:39:26:13:13:40 0/1:37:7:0:7:25:29.17%:23:4.7006E-3:42:17:8:9:26 0/1:37:6:0:6:17:35.29%:20:9.2021E-3:36:11:3:8:19 0/1:38:7:1:6:24:30.43%:23:4.5803E-3:39:16:6:10:26 0/1:36:14:3:11:32:43.75%:50:9.8512E-6:40:18:5:13:35 0/1:37:10:1:9:33:31.25%:33:4.259E-4:41:22:9:13:33 0/1:37:10:3:7:30:33.33%:33:3.9851E-4:38:20:5:15:33 0/1:36:7:1:6:27:28%:23:4.8126E-3:38:18:5:13:28 0/0:37:6:1:5:24:26.09%:11:1.0777E-2:40:17:7:10:25 0/0:37:3:0:3:15:20%:11:1.1207E-1:38:12:3:9:17 0/0:36:4:0:4:17:23.53%:11:5.132E-2:39:13:7:6:17 0/1:36:12:2:10:42:29.27%:40:9.5339E-5:37:29:11:18:45 0/1:40:11:3:8:33:34.38%:37:1.7351E-4:34:21:6:15:34 0/1:39:15:4:11:51:29.41%:50:9.1412E-6:37:36:8:28:53 0/1:39:11:4:7:37:32.35%:37:1.8662E-4:38:23:5:18:40 0/1:36:20:4:16:59:33.9%:68:1.3682E-7:39:39:10:29:62 0/0:35:5:0:5:29:17.86%:19:2.5729E-2:39:23:13:10:30 0/0:37:4:0:4:39:10.53%:37:5.7534E-2:41:34:11:23:43 0/0:33:2:0:2:21:10%:21:2.4359E-1:37:18:6:12:22 0/1:37:8:1:7:20:40%:27:1.638E-3:38:12:4:8:20 0/0:36:6:0:6:24:27.27%:9:1.057E-2:38:16:8:8:27 0/1:35:11:2:9:39:28.95%:36:2.1011E-4:40:27:8:19:40 0/0:36:5:1:4:30:18.52%:19:2.5527E-2:38:22:7:15:30 0/1:41:13:3:10:37:37.14%:45:3.1103E-5:38:22:13:9:41 0/1:36:8:1:7:31:26.67%:26:2.2875E-3:39:22:11:11:32 0/1:37:12:2:10:38:31.58%:40:8.7276E-5:37:26:10:16:38 0/1:34:6:1:5:19:33.33%:20:9.5308E-3:37:12:2:10:19 0/1:35:9:2:7:40:23.08%:29:1.162E-3:39:30:10:20:41 0/0:34:2:0:2:15:13.33%:16:2.4138E-1:36:13:4:9:15 0/0:35:5:0:5:16:31.25%:6:2.1691E-2:38:11:5:6:18 0/1:36:11:5:6:29:39.29%:38:1.4422E-4:41:17:3:14:32 0/1:36:12:2:10:49:24.49%:39:1.1358E-4:40:37:14:23:51 0/1:39:9:3:6:33:29.03%:30:9.9376E-4:39:22:6:16:34 0/1:37:7:0:7:12:58.33%:26:2.2883E-3:45:5:2:3:14 0/1:41:12:3:9:36:35.29%:41:7.5302E-5:35:22:4:18:39 0/1:36:16:1:15:35:48.48%:58:1.364E-6:35:17:5:12:35 0/1:37:13:3:10:24:56.52%:49:1.1242E-5:38:10:1:9:28 0/0:36:6:1:5:28:22.22%:16:1.1461E-2:39:21:7:14:31 0/1:36:7:1:6:19:36.84%:23:3.9926E-3:39:12:4:8:20 0/0:38:3:1:2:17:18.75%:11:1.129E-1:42:13:2:11:19 0/1:35:19:4:15:49:38.78%:66:2.1763E-7:36:30:8:22:51 0/1:39:12:1:11:52:23.53%:39:1.1751E-4:35:39:11:28:55 0/1:36:9:2:7:35:26.47%:29:1.0644E-3:37:25:7:18:37 0/1:36:11:2:9:37:31.43%:37:1.9282E-4:39:24:6:18:38 0/0:37:4:0:4:20:20%:13:5.3015E-2:41:16:4:12:20 0/0:35:5:0:5:15:33.33%:6:2.1073E-2:40:10:5:5:17 0/1:36:14:1:13:37:37.84%:48:1.3393E-5:39:23:7:16:37 0/1:37:9:1:8:38:23.68%:29:1.1442E-3:38:29:9:20:38 0/0:35:5:3:2:21:23.81%:12:2.3921E-2:36:16:8:8:21 0/0:41:6:1:5:26:23.08%:13:1.1309E-2:35:20:8:12:29 0/1:36:11:3:8:33:36.67%:37:1.594E-4:39:19:6:13:34 0/1:38:9:0:9:21:42.86%:31:6.592E-4:35:12:5:7:21 0/1:36:10:0:10:39:27.03%:33:4.8486E-4:38:27:10:17:41 0/0:38:5:2:3:23:22.73%:12:2.4248E-2:40:17:3:14:23 0/1:36:7:1:6:27:26.92%:23:4.9169E-3:40:19:8:11:28 0/1:37:7:0:7:17:41.18%:24:3.6151E-3:38:10:3:7:18 0/0:37:4:1:3:26:16%:21:5.4928E-2:41:21:8:13:28 0/1:41:17:3:14:46:39.53%:59:1.0581E-6:34:26:8:18:48 0/1:38:8:0:8:21:38.1%:27:1.7241E-3:41:13:6:7:22 0/1:41:6:2:4:15:40%:20:8.4291E-3:39:9:3:6:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:32:4:1:3:22:20%:13:5.3015E-2:37:16:6:10:24 0/1:34:8:4:4:24:36.36%:27:1.8042E-3:36:14:4:10:28 0/0:37:2:0:2:12:18.18%:10:2.381E-1:38:9:3:6:12 0/0:36:5:2:3:20:25%:10:2.3562E-2:37:15:2:13:24 0/0:37:6:2:4:20:30%:7:1.0098E-2:37:14:3:11:20 0/1:38:14:3:11:35:42.42%:49:1.0577E-5:35:19:5:14:36 0/0:36:3:1:2:11:27.27%:7:1.0714E-1:48:8:5:3:12 0/1:35:12:3:9:34:37.5%:41:6.8751E-5:36:20:4:16:36 0/1:36:8:0:8:26:32%:26:2.0146E-3:38:17:6:11:28 0/1:36:21:4:17:56:38.18%:73:4.4698E-8:36:34:6:28:58 0/1:38:8:2:6:26:32%:26:2.0146E-3:36:17:7:10:26 0/1:36:12:2:10:37:35.29%:41:7.5302E-5:36:22:4:18:38 0/1:37:9:3:6:35:25.71%:29:1.0857E-3:39:26:8:18:38 0/1:34:10:0:10:36:29.41%:33:4.51E-4:38:24:4:20:38 0/1:39:12:3:9:40:30.77%:40:9.0046E-5:35:27:5:22:41 0/1:36:11:3:8:42:26.83%:36:2.2563E-4:41:30:14:16:47 0/1:39:9:1:8:48:19.57%:28:1.2682E-3:38:37:14:23:56 0/0:36:5:0:5:23:22.73%:12:2.4248E-2:36:17:4:13:27 0/0:36:6:1:5:22:28.57%:9:1.0344E-2:40:15:8:7:24 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:32:7:1:6:9 0/1:37:14:0:14:37:37.84%:48:1.3393E-5:41:23:7:16:38 0/0:31:4:1:3:25:18.18%:15:5.3885E-2:36:18:6:12:27 0/1:35:17:2:15:45:39.53%:59:1.0581E-6:35:26:6:20:46 0/1:36:8:2:6:35:22.86%:26:2.4931E-3:36:27:10:17:37 0/1:36:20:2:18:68:29.85%:67:1.7998E-7:38:47:17:30:73 0/0:37:6:0:6:39:15.79%:28:1.2628E-2:39:32:9:23:41 0/1:37:12:4:8:39:31.58%:40:8.7276E-5:38:26:9:17:40 0/0:37:5:1:4:19:26.32%:10:2.3166E-2:35:14:4:10:22 0/1:36:12:1:11:30:40%:42:6.1809E-5:38:18:10:8:36 0/1:37:7:1:6:28:25%:22:5.1054E-3:35:21:6:15:28 0/1:36:8:2:6:28:32%:26:2.0146E-3:34:17:2:15:30 0/0:36:5:1:4:21:25%:10:2.3562E-2:35:15:5:10:22 0/1:36:11:1:10:44:25%:36:2.3962E-4:36:33:14:19:47 0/1:36:6:1:5:20:31.58%:20:9.828E-3:33:13:1:12:21 0/1:37:10:1:9:24:41.67%:35:2.9985E-4:36:14:3:11:27 0/1:36:12:1:11:39:30.77%:40:9.0046E-5:37:27:6:21:42 0/1:36:7:0:7:32:22.58%:22:5.3469E-3:39:24:5:19:34 0/1:36:6:3:3:18:35.29%:20:9.2021E-3:36:11:5:6:18 0/0:32:6:0:6:25:25%:11:1.0968E-2:39:18:6:12:28 0/0:37:6:0:6:22:28.57%:9:1.0344E-2:37:15:5:10:22 0/1:37:9:3:6:24:37.5%:31:7.7962E-4:33:15:3:12:26 0/0:35:5:1:4:17:29.41%:8:2.2239E-2:36:12:6:6:18 0/1:36:10:1:9:26:38.46%:34:3.3576E-4:34:16:8:8:28 0/1:36:12:1:11:25:50%:44:3.8815E-5:36:12:3:9:26 0/1:37:7:2:5:22:33.33%:23:4.3101E-3:38:14:1:13:25 0/0:35:6:1:5:25:26.09%:11:1.0777E-2:36:17:6:11:27 0/1:35:9:1:8:23:39.13%:31:7.4174E-4:39:14:3:11:24 0/0:34:1:0:1:7:14.29%:8:5E-1:36:6:3:3:8 0/1:37:7:1:6:30:24.14%:22:5.1909E-3:38:22:8:14:30 0/0:37:3:0:3:12:25%:6:1.087E-1:36:9:2:7:14 0/0:36:4:1:3:22:18.18%:15:5.3885E-2:36:18:0:18:23 0/1:33:9:0:9:23:39.13%:31:7.4174E-4:44:14:6:8:25 0/1:37:14:4:10:34:42.42%:49:1.0577E-5:41:19:6:13:35 0/0:38:5:4:1:23:22.73%:12:2.4248E-2:34:17:4:13:23 0/1:36:8:0:8:34:25%:26:2.3764E-3:37:24:5:19:37 0/1:37:14:1:13:29:50%:51:6.911E-6:38:14:6:8:31 0/1:36:12:2:10:22:54.55%:45:3.066E-5:37:10:4:6:23 0/0:37:4:3:1:20:21.05%:13:5.251E-2:39:15:3:12:20 0/1:41:10:6:4:28:35.71%:34:3.6855E-4:36:18:7:11:29 0/0:35:6:1:5:22:28.57%:9:1.0344E-2:37:15:3:12:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:37:12:3:9:27:44.44%:42:5.0681E-5:35:15:2:13:28 0/1:36:14:6:8:33:43.75%:50:9.8512E-6:38:18:3:15:36 0/1:38:11:2:9:32:35.48%:37:1.6659E-4:37:20:6:14:35 0/1:38:14:3:11:33:43.75%:50:9.8512E-6:35:18:4:14:36 MTB_anc 3941572 . C CGGCCAACAA . PASS AC=78;AF=0.264;AN=296;ANN=CGGCCAACAA|inframe_insertion|MODERATE|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.1959_1960insCAACAAGGC|p.Gly653_Asn654insGlnGlnGly|1960/2145|1960/2145|654/714||INFO_REALIGN_3_PRIME,CGGCCAACAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941572_3941573insGGCCAACAA||||||,CGGCCAACAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941572_3941573insGGCCAACAA||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:37:9:0:9:40:23.08%:29:1.162E-3:38:30:6:24:41 0/0:36:2:1:1:9:22.22%:7:2.3529E-1:39:7:1:6:9 0/1:35:9:1:8:36:25.71%:29:1.0857E-3:38:26:8:18:37 0/0:38:5:3:2:12:41.67%:3:1.8634E-2:44:7:2:5:12 0/0:25:2:1:1:26:7.69%:30:2.451E-1:39:24:8:16:28 0/0:38:1:0:1:12:8.33%:14:5E-1:39:11:2:9:12 0/0:37:4:1:3:37:11.43%:35:5.7106E-2:39:31:7:24:39 0/1:37:6:0:6:16:37.5%:20:8.837E-3:37:10:3:7:17 0/0:37:4:0:4:17:23.53%:11:5.132E-2:38:13:3:10:18 0/1:36:11:4:7:34:33.33%:37:1.8019E-4:40:22:6:16:35 0/1:36:6:1:5:20:33.33%:20:9.5308E-3:37:12:3:9:21 0/1:36:10:1:9:37:28.57%:33:4.6276E-4:40:25:6:19:39 0/1:36:7:0:7:17:41.18%:24:3.6151E-3:37:10:6:4:17 0/1:36:11:1:10:35:33.33%:37:1.8019E-4:37:22:2:20:36 0/1:36:8:2:6:22:34.78%:27:1.8791E-3:35:15:2:13:25 0/1:39:10:3:7:21:47.62%:36:2.3971E-4:42:11:1:10:23 0/0:38:3:1:2:17:17.65%:14:1.1364E-1:35:14:5:9:17 0/0:37:2:0:2:10:20%:7:2.3684E-1:43:8:4:4:11 0/0:40:5:3:2:15:35.71%:4:2.037E-2:38:9:2:7:16 0/0:37:3:1:2:14:23.08%:9:1.1E-1:40:10:2:8:15 0/1:36:6:0:6:16:37.5%:20:8.837E-3:36:10:3:7:16 0/1:34:14:4:10:37:38.89%:49:1.2005E-5:36:21:5:16:37 0/0:38:1:1:0:21:4.76%:27:5E-1:36:19:3:16:22 0/1:36:8:2:6:29:28.57%:26:2.188E-3:37:20:3:17:29 0/1:39:12:2:10:38:32.43%:40:8.4418E-5:39:25:13:12:40 0/0:38:5:0:5:24:21.74%:14:2.4548E-2:41:18:8:10:25 0/0:38:5:0:5:18:27.78%:8:2.2727E-2:36:13:3:10:19 0/1:36:8:1:7:24:34.78%:27:1.8791E-3:41:15:6:9:26 0/1:36:13:3:10:32:39.39%:45:2.8029E-5:39:20:5:15:34 0/1:36:10:1:9:33:31.25%:33:4.259E-4:42:22:9:13:34 0/1:35:11:3:8:31:35.48%:37:1.6659E-4:37:20:6:14:34 0/0:37:5:1:4:27:20%:17:2.5076E-2:38:20:5:15:27 0/0:37:5:1:4:26:20%:17:2.5076E-2:39:20:8:12:26 0/0:37:3:0:3:17:17.65%:14:1.1364E-1:40:14:3:11:17 0/0:37:4:0:4:17:23.53%:11:5.132E-2:40:13:7:6:17 0/1:36:9:1:8:43:21.43%:29:1.2112E-3:37:33:12:21:44 0/1:41:9:3:6:34:27.27%:29:1.042E-3:35:24:6:18:35 0/1:39:11:4:7:51:21.57%:35:2.6733E-4:38:40:8:32:51 0/1:39:11:4:7:39:30.56%:37:1.9879E-4:39:25:5:20:39 0/1:35:17:3:14:60:27.87%:56:2.0389E-6:39:43:11:32:62 0/0:34:4:0:4:27:15.38%:20:5.5222E-2:40:22:13:9:30 0/0:35:4:0:4:41:10%:40:5.7784E-2:42:36:11:25:43 0/0:25:2:0:2:21:9.52%:25:2.439E-1:38:19:6:13:22 0/1:37:8:1:7:20:40%:27:1.638E-3:41:12:4:8:20 0/0:38:4:0:4:25:17.39%:18:5.4264E-2:37:19:8:11:26 0/1:37:9:2:7:37:25%:29:1.1061E-3:40:27:8:19:38 0/0:36:4:1:3:29:15.38%:20:5.5222E-2:38:22:6:16:30 0/1:41:14:3:11:38:37.84%:48:1.3393E-5:38:23:13:10:41 0/1:36:7:1:6:32:22.58%:22:5.3469E-3:39:24:11:13:32 0/1:38:9:2:7:35:25.71%:29:1.0857E-3:37:26:10:16:37 0/0:33:3:0:3:17:18.75%:11:1.129E-1:36:13:1:12:18 0/0:37:5:1:4:38:13.51%:32:2.706E-2:41:32:10:22:39 0/0:37:1:0:1:15:6.67%:21:5E-1:35:14:4:10:15 0/0:37:4:0:4:16:25%:8:5.0612E-2:38:12:5:7:17 0/1:30:7:3:4:30:23.33%:22:5.2713E-3:42:23:4:19:32 0/1:37:7:2:5:49:14.29%:22:6.1774E-3:40:41:14:27:51 0/1:38:10:3:7:34:31.25%:33:4.259E-4:40:22:6:16:34 0/1:36:8:0:8:12:66.67%:31:6.7304E-4:45:4:2:2:14 0/1:38:13:3:10:35:38.24%:45:2.9583E-5:38:21:3:18:39 0/1:36:13:1:12:35:39.39%:45:2.8029E-5:36:20:5:15:35 0/1:32:14:3:11:26:51.85%:52:6.1806E-6:43:13:1:12:28 0/0:36:5:1:4:31:16.67%:21:2.6093E-2:37:25:8:17:31 0/1:37:7:1:6:21:33.33%:23:4.3101E-3:39:14:4:10:21 0/0:30:3:1:2:17:17.65%:14:1.1364E-1:42:14:3:11:19 0/1:36:17:4:13:50:34%:58:1.4808E-6:37:33:8:25:50 0/1:40:9:1:8:53:17.31%:28:1.3391E-3:38:43:12:31:55 0/1:37:7:2:5:36:20%:22:5.6095E-3:38:28:7:21:36 0/1:37:8:2:6:36:23.53%:26:2.4562E-3:39:26:6:20:38 0/0:37:3:0:3:20:15%:16:1.1538E-1:40:17:4:13:20 0/0:36:5:0:5:15:33.33%:6:2.1073E-2:40:10:5:5:17 0/1:37:11:1:10:36:30.56%:37:1.9879E-4:38:25:6:19:37 0/1:37:7:1:6:37:18.92%:22:5.721E-3:39:30:9:21:38 0/0:37:5:3:2:21:23.81%:12:2.3921E-2:37:16:8:8:21 0/0:42:5:1:4:29:17.24%:22:2.5917E-2:36:24:9:15:29 0/0:36:6:2:4:32:20.69%:18:1.1736E-2:40:23:6:17:33 0/1:41:6:0:6:19:31.58%:20:9.828E-3:36:13:4:9:21 0/1:37:8:0:8:41:20.51%:25:2.624E-3:38:31:11:20:42 0/0:37:3:2:1:23:13.64%:19:1.1628E-1:41:19:3:16:23 0/0:36:6:1:5:26:24%:11:1.0968E-2:40:18:8:10:28 0/0:37:5:0:5:17:29.41%:8:2.2239E-2:39:12:3:9:18 0/0:36:3:1:2:25:12.5%:22:1.1667E-1:41:20:8:12:28 0/1:37:15:2:13:48:32.61%:51:7.8109E-6:35:31:9:22:49 0/0:38:4:0:4:22:18.18%:15:5.3885E-2:41:18:7:11:23 0/0:45:3:1:2:18:16.67%:14:1.1429E-1:37:15:4:11:18 0/0:0:0:0:0:7:0%:14:1E0:33:7:1:6:7 0/0:34:3:1:2:23:14.29%:19:1.1585E-1:39:18:6:12:23 0/0:23:6:3:3:24:25%:11:1.0968E-2:41:18:4:14:27 0/0:37:2:0:2:12:18.18%:10:2.381E-1:38:9:3:6:12 0/0:37:3:1:2:24:12.5%:22:1.1702E-1:38:21:3:18:24 0/0:37:4:0:4:20:20%:13:5.3015E-2:38:16:5:11:20 0/1:36:14:3:11:35:42.42%:49:1.0577E-5:37:19:4:15:35 0/0:38:1:0:1:11:9.09%:14:5E-1:43:10:6:4:12 0/1:38:10:2:8:33:32.26%:33:4.1251E-4:38:21:5:16:35 0/1:37:7:0:7:28:25.93%:22:5.0143E-3:37:20:6:14:28 0/1:37:17:3:14:56:30.91%:57:1.7118E-6:39:37:5:32:57 0/1:40:8:2:6:26:32%:26:2.0146E-3:36:17:7:10:26 0/1:36:9:2:7:37:26.47%:29:1.0644E-3:37:25:4:21:38 0/1:36:7:3:4:36:19.44%:22:5.6667E-3:40:29:9:20:38 0/1:29:7:0:7:35:20%:22:5.6095E-3:38:28:4:24:38 0/1:39:12:4:8:39:31.58%:40:8.7276E-5:36:26:4:22:40 0/1:37:8:3:5:46:17.78%:25:2.7808E-3:38:37:15:22:48 0/0:32:6:1:5:52:11.54%:47:1.3417E-2:39:46:14:32:56 0/0:37:4:0:4:25:16.67%:18:5.4264E-2:37:19:4:15:27 0/0:35:5:1:4:24:21.74%:14:2.4548E-2:39:18:8:10:24 0/0:28:1:0:1:9:11.11%:11:5E-1:36:8:1:7:9 0/1:37:11:0:11:37:29.73%:36:2.0455E-4:41:26:7:19:38 0/0:37:2:0:2:26:8.33%:28:2.4444E-1:38:21:6:15:27 0/1:37:14:2:12:44:33.33%:47:1.6656E-5:36:28:6:22:45 0/1:36:7:2:5:37:18.92%:22:5.721E-3:36:30:10:20:37 0/1:36:17:2:15:71:24.29%:56:2.4824E-6:38:52:18:34:72 0/0:38:5:0:5:38:13.51%:32:2.706E-2:40:32:8:24:41 0/1:35:8:2:6:40:20.51%:25:2.624E-3:38:31:11:20:41 0/0:37:5:1:4:22:22.73%:12:2.4248E-2:36:17:4:13:22 0/1:40:8:1:7:32:25%:26:2.3764E-3:39:24:10:14:33 0/0:37:3:1:2:28:10.71%:28:1.1818E-1:36:25:6:19:28 0/1:36:8:2:6:29:30.77%:26:2.076E-3:35:18:2:16:30 0/0:37:4:1:3:21:20%:13:5.251E-2:35:15:5:10:21 0/1:35:9:1:8:45:19.57%:28:1.2682E-3:37:37:14:23:47 0/0:35:6:1:5:21:30%:7:1.0098E-2:36:14:1:13:21 0/1:35:8:1:7:27:29.63%:26:2.076E-3:36:18:3:15:27 0/1:37:11:1:10:41:26.83%:36:2.2563E-4:38:30:7:23:42 0/1:34:7:0:7:33:21.88%:22:5.4182E-3:39:25:4:21:34 0/0:33:5:3:2:17:29.41%:8:2.2239E-2:36:12:5:7:18 0/0:36:5:0:5:27:19.23%:17:2.531E-2:38:21:6:15:28 0/0:36:6:0:6:22:28.57%:9:1.0344E-2:37:15:5:10:22 0/0:37:5:2:3:26:19.23%:17:2.5076E-2:35:20:4:16:26 0/0:35:3:1:2:17:17.65%:14:1.1364E-1:36:14:5:9:18 0/0:37:4:0:4:27:14.81%:23:5.5494E-2:36:23:8:15:28 0/1:39:11:1:10:25:45.83%:39:1.1047E-4:37:13:3:10:26 0/0:33:6:2:4:22:26.09%:9:1.057E-2:38:16:1:15:25 0/0:37:4:1:3:26:16.67%:18:5.461E-2:36:20:7:13:27 0/1:35:8:1:7:22:36.36%:27:1.8042E-3:40:14:2:12:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:7:1:6:29:25%:22:5.1054E-3:38:21:7:14:30 0/0:36:4:0:4:14:28.57%:6:4.8889E-2:35:10:2:8:14 0/0:35:3:0:3:23:13.04%:22:1.1667E-1:37:20:1:19:23 0/1:32:7:0:7:22:30.43%:23:4.5803E-3:43:16:6:10:24 0/1:36:11:4:7:31:36.67%:37:1.594E-4:42:19:3:16:35 0/0:38:5:4:1:23:22.73%:12:2.4248E-2:35:17:4:13:23 0/0:37:6:0:6:35:18.18%:23:1.219E-2:38:27:5:22:36 0/1:37:12:1:11:30:41.38%:42:5.8193E-5:39:17:6:11:30 0/1:37:10:2:8:22:45.45%:35:2.6061E-4:37:12:4:8:22 0/0:36:4:3:1:20:21.05%:13:5.251E-2:39:15:3:12:20 0/1:41:9:6:3:28:32.14%:30:9.1169E-4:36:19:7:12:29 0/0:36:5:1:4:22:23.81%:12:2.3921E-2:37:16:3:13:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:12:3:9:27:44.44%:42:5.0681E-5:39:15:2:13:28 0/1:37:10:4:6:36:28.57%:33:4.6276E-4:39:25:6:19:36 0/1:38:10:3:7:34:30.3%:33:4.259E-4:39:22:6:16:34 0/1:39:12:3:9:36:34.29%:41:7.8434E-5:36:23:5:18:36 MTB_anc 3941719 . CG C . PASS AC=159;AF=0.679;AN=234;ANN=C|frameshift_variant|HIGH|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.2104delG|p.Val702fs|2104/2145|2104/2145|702/714||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941720delG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941720delG||||||;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:39:13:0:13:16:76.47%:55:2.5647E-6:35:4:0:4:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:11:3:8:15:73.33%:46:2.4988E-5:36:4:0:4:15 1/1:49:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:42:9:3:6:12:75%:37:1.6826E-4:33:3:0:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:7:2:5:12:58.33%:26:2.2883E-3:35:5:0:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:41:6:1:5:8:75%:24:3.4965E-3:35:2:0:2:8 0/1:31:6:1:5:7:75%:24:3.4965E-3:35:2:0:2:8 0/1:40:6:1:5:10:60%:22:5.418E-3:36:4:0:4:10 0/1:41:6:0:6:10:66.67%:23:4.5249E-3:34:3:0:3:10 0/1:38:6:1:5:7:85.71%:26:2.331E-3:37:1:0:1:7 1/1:41:11:2:9:12:91.67%:53:4.8074E-6:33:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:37:8:0:8:10:80%:34:3.5723E-4:35:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:8:1:7:8:88.89%:36:2.0568E-4:37:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:40:12:0:12:13:85.71%:55:2.9913E-6:35:2:0:2:14 1/1:41:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:10:2:8:11:90.91%:47:1.7011E-5:37:1:0:1:11 0/1:40:16:2:14:19:80%:71:7.7086E-8:34:4:1:3:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:45:8:2:6:11:72.73%:32:5.16E-4:33:3:0:3:11 0/1:41:7:1:6:10:70%:28:1.548E-3:31:3:1:2:10 1/1:36:14:3:11:13:93.33%:76:2.4927E-8:0:0:0:0:15 0/1:38:7:0:7:9:77.78%:29:1.1312E-3:34:2:0:2:9 0/1:35:11:2:9:14:78.57%:47:1.6951E-5:37:3:0:3:14 1/1:37:8:0:8:7:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:8:1:7:9:80%:34:3.5723E-4:35:2:0:2:10 1/1:37:15:1:14:16:93.75%:75:2.8282E-8:35:1:0:1:16 1/1:36:17:3:14:17:94.44%:86:2.0936E-9:37:1:0:1:18 0/1:39:27:4:23:30:87.1%:99:1.125E-13:35:4:0:4:31 1/1:40:21:1:20:22:95.45%:99:1.0931E-11:34:1:0:1:22 1/1:37:24:3:21:24:92.31%:99:7.6222E-13:35:2:0:2:26 0/1:38:7:1:6:8:87.5%:31:6.993E-4:33:1:0:1:8 0/1:36:12:0:12:14:80%:52:5.2605E-6:31:3:1:2:15 0/1:36:8:0:8:11:72.73%:32:5.16E-4:35:3:0:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:12:1:11:12:92.31%:58:1.3461E-6:37:1:0:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:39:10:0:10:13:76.92%:42:5.3843E-5:35:3:0:3:13 0/1:37:8:0:8:9:88.89%:36:2.0568E-4:37:1:0:1:9 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:0:11:10:100%:58:1.4176E-6:0:0:0:0:11 0/1:40:10:1:9:12:83.33%:44:3.3652E-5:34:2:0:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:41:7:0:7:8:87.5%:31:6.993E-4:37:1:0:1:8 1/1:37:17:1:16:18:94.44%:86:2.0936E-9:38:1:0:1:18 0/1:39:11:0:11:13:84.62%:49:1.0096E-5:37:2:0:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:12:2:10:14:75%:50:8.0605E-6:33:4:1:3:16 0/1:37:10:1:9:12:76.92%:42:5.3843E-5:36:3:0:3:13 0/1:40:7:1:6:9:77.78%:29:1.1312E-3:32:2:0:2:9 0/1:39:13:2:11:17:81.25%:57:1.6121E-6:36:3:0:3:17 0/1:37:10:3:7:12:83.33%:44:3.3652E-5:37:2:0:2:12 1/1:40:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:20:2:18:19:90.91%:98:1.3117E-10:34:2:0:2:22 0/1:38:19:2:17:23:79.17%:84:3.6826E-9:34:5:0:5:24 0/1:40:10:1:9:13:76.92%:42:5.3843E-5:34:3:0:3:13 1/1:41:13:3:10:14:92.86%:64:3.7391E-7:37:1:1:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:11:4:7:13:84.62%:49:1.0096E-5:35:2:0:2:13 0/1:39:9:4:5:13:69.23%:36:2.2883E-4:36:4:0:4:13 0/1:40:8:0:8:9:88.89%:36:2.0568E-4:34:1:0:1:9 0/1:41:10:4:6:13:76.92%:42:5.3843E-5:34:3:0:3:13 0/1:38:7:2:5:9:77.78%:29:1.1312E-3:35:2:0:2:9 1/1:38:9:0:9:9:90%:42:5.9538E-5:32:1:1:0:10 0/1:35:9:1:8:10:81.82%:39:1.1057E-4:33:2:0:2:11 1/1:35:11:2:9:11:91.67%:53:4.8074E-6:37:1:0:1:12 0/1:37:6:0:6:9:66.67%:23:4.5249E-3:35:3:2:1:9 0/1:37:6:0:6:8:75%:24:3.4965E-3:35:2:0:2:8 0/1:34:7:1:6:7:87.5%:31:6.993E-4:34:1:0:1:8 0/1:38:11:1:10:13:84.62%:49:1.0096E-5:33:2:0:2:13 1/1:40:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:40:8:0:8:10:88.89%:36:2.0568E-4:33:1:0:1:10 0/1:46:6:2:4:10:60%:22:5.418E-3:33:4:0:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:43:8:1:7:11:72.73%:32:5.16E-4:37:3:0:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:38:14:1:13:17:82.35%:63:4.8851E-7:43:3:0:3:17 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:37:10:2:8:15:66.67%:40:9.995E-5:36:5:0:5:15 1/1:36:9:3:6:10:90%:42:5.9538E-5:38:1:0:1:10 0/1:41:20:1:19:25:80%:89:1.1273E-9:34:5:1:4:25 0/1:38:13:2:11:15:86.67%:60:8.7675E-7:37:2:0:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:12:3:9:14:92.31%:58:1.3461E-6:33:1:0:1:14 1/1:39:9:1:8:10:90%:42:5.9538E-5:38:1:1:0:10 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 0/1:39:11:2:9:12:84.62%:49:1.0096E-5:31:2:1:1:13 0/1:37:18:0:18:21:81.82%:81:7.1052E-9:35:4:0:4:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:11:3:8:12:91.67%:53:4.8074E-6:37:1:0:1:12 1/1:42:9:0:9:10:90%:42:5.9538E-5:38:1:0:1:10 0/1:40:14:2:12:20:70%:57:1.6702E-6:37:6:0:6:20 1/1:38:13:1:12:14:92.86%:64:3.7391E-7:37:1:0:1:14 0/1:37:22:0:22:27:81.48%:99:1.0343E-10:35:5:1:4:27 0/1:40:16:2:14:19:84.21%:73:4.357E-8:33:3:0:3:19 0/1:39:15:1:14:16:88.24%:71:7.3277E-8:35:2:1:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:14:2:12:14:87.5%:65:2.5454E-7:37:2:0:2:16 0/1:37:9:1:8:11:75%:37:1.6826E-4:34:3:0:3:12 0/1:36:8:0:8:9:80%:34:3.5723E-4:48:2:0:2:10 0/1:30:11:1:10:11:84.62%:49:1.0096E-5:35:2:1:1:13 0/1:37:17:1:16:19:89.47%:82:5.9414E-9:33:2:0:2:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:48:10:1:9:12:90.91%:47:1.7011E-5:37:1:0:1:12 1/1:41:20:3:17:21:95.24%:99:4.0873E-11:33:1:0:1:21 0/1:37:12:0:12:14:80%:52:5.2605E-6:31:3:1:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:35:9:0:9:9:90%:42:5.9538E-5:37:1:0:1:10 1/1:35:11:1:10:11:91.67%:53:4.8074E-6:37:1:0:1:12 1/1:32:9:1:8:8:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:35:9:2:7:10:90%:42:5.9538E-5:37:1:0:1:12 0/1:38:6:0:6:8:75%:24:3.4965E-3:34:2:0:2:8 0/1:37:8:2:6:9:88.89%:36:2.0568E-4:38:1:0:1:9 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 0/1:37:7:0:7:8:87.5%:31:6.993E-4:37:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:9:0:9:11:75%:37:1.6826E-4:32:3:0:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:43:12:2:10:14:85.71%:55:2.9913E-6:35:2:0:2:14 0/1:39:8:2:6:10:80%:34:3.5723E-4:33:2:0:2:10 0/1:41:12:0:12:16:75%:50:8.0605E-6:34:4:0:4:16 1/1:41:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:1:14:16:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:37:10:2:8:11:90.91%:47:1.7011E-5:38:1:0:1:11 0/1:39:8:1:7:10:80%:34:3.5723E-4:35:2:0:2:10 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:9:1:8:10:100%:46:2.0568E-5:0:0:0:0:10 0/1:36:6:0:6:9:66.67%:23:4.5249E-3:35:3:0:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:41:10:2:8:12:83.33%:44:3.3652E-5:36:2:0:2:12 0/1:40:15:0:15:19:75%:64:3.8543E-7:34:5:0:5:20 1/1:37:16:2:14:16:94.12%:81:7.7134E-9:37:1:0:1:17 0/1:34:9:1:8:10:81.82%:39:1.1057E-4:32:2:0:2:11 MTB_anc 3941723 . A C . PASS AC=208;AF=0.954;AN=218;ANN=C|missense_variant|MODERATE|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.2107A>C|p.Thr703Pro|2107/2145|2107/2145|703/714||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941723A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941723A>C||||||;set=variant-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:13:0:13:14:92.86%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:11:3:8:12:91.67%:53:4.8074E-6:32:1:0:1:12 1/1:50:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:40:7:1:6:8:87.5%:31:6.993E-4:32:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:0:8:9:88.89%:36:2.0568E-4:32:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:38:8:1:7:9:88.89%:36:2.0568E-4:34:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:16:2:14:17:94.12%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:45:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:14:3:11:15:93.33%:69:1.0315E-7:38:1:1:0:15 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:27:4:23:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:21:1:20:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:24:3:21:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:12:2:10:13:100%:64:3.698E-7:0:0:0:0:14 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:19:2:17:20:95%:98:1.5234E-10:33:1:0:1:20 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:38:8:1:7:9:88.89%:36:2.0568E-4:33:1:0:1:9 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 0/1:47:6:2:4:7:85.71%:26:2.331E-3:33:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:41:8:1:7:10:80%:34:3.5723E-4:32:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:40:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:13:2:11:14:92.86%:64:3.7391E-7:32:1:0:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 0/1:40:11:2:9:13:84.62%:53:4.8074E-6:34:1:0:1:13 1/1:37:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:11:3:8:12:91.67%:53:4.8074E-6:32:1:0:1:12 1/1:41:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:40:14:2:12:16:87.5%:65:2.5454E-7:33:2:0:2:16 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:22:0:22:23:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:40:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:14:1:13:15:93.33%:69:1.0315E-7:36:1:0:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:38:8:0:8:9:88.89%:36:2.0568E-4:34:1:0:1:9 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:18:1:17:19:94.74%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:47:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:39:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:11:0:11:12:91.67%:53:4.8074E-6:34:1:0:1:13 1/1:39:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:37:6:0:6:7:85.71%:26:2.331E-3:34:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 MTB_anc 3941724 . C A . PASS AC=210;AF=0.963;AN=218;ANN=A|missense_variant|MODERATE|PE_PGRS55_Rv3511|gene3584|transcript|Transcript_gene3584|Coding|1/1|c.2108C>A|p.Thr703Asn|2108/2145|2108/2145|703/714||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941724C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941724C>A||||||;set=variant-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:13:0:13:14:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:9:3:6:10:90%:42:5.9538E-5:34:1:0:1:12 1/1:45:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:39:7:1:6:8:87.5%:31:6.993E-4:33:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:7:0:7:8:87.5%:31:6.993E-4:33:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:1:7:9:88.89%:36:2.0568E-4:34:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:12 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:15:2:13:16:100%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:14:3:11:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:21:1:20:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:24:3:21:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:39:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:12:2:10:13:100%:64:3.698E-7:0:0:0:0:14 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:16:2:14:17:94.12%:81:7.7134E-9:33:1:0:1:20 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 0/1:46:6:2:4:7:85.71%:26:2.331E-3:33:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:40:7:1:6:9:77.78%:29:1.1312E-3:33:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:13:2:11:14:92.86%:64:3.7391E-7:34:1:0:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:10:2:8:12:90.91%:47:1.7011E-5:33:1:0:1:13 1/1:37:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:11:3:8:12:91.67%:53:4.8074E-6:33:1:0:1:12 1/1:40:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:39:12:2:10:14:85.71%:55:2.9913E-6:33:2:0:2:16 1/1:34:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:23:0:23:24:95.83%:99:7.7525E-13:33:1:0:1:24 1/1:39:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:37:7:0:7:8:87.5%:31:6.993E-4:34:1:0:1:9 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:18:1:17:19:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:46:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:40:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:12:0:12:13:92.31%:58:1.3461E-6:33:1:0:1:13 1/1:44:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:40:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:37:6:0:6:7:85.71%:26:2.331E-3:33:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 MTB_anc 3941834 . C G . PASS AC=265;AF=0.996;AN=266;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941834C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941834C>G||||||,G|intergenic_region|MODIFIER|PE_PGRS55_Rv3511-PE_PGRS56_Rv3512|gene3584-gene3585|intergenic_region|gene3584-gene3585|||n.3941834C>G||||||;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:17:3:14:19:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:9:2:7:10:100%:46:2.0568E-5:0:0:0:0:11 1/1:34:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:9:1:8:12:100%:46:2.0568E-5:0:0:0:0:12 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:17:1:16:19:100%:93:4.2852E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:2:12:15:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:12:0:12:14:100%:64:3.698E-7:0:0:0:0:14 1/1:38:9:1:8:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:15:2:13:17:100%:81:6.4467E-9:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:13:1:12:14:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:16:0:16:17:100%:87:1.6637E-9:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:1:9:11:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:16:2:14:17:100%:87:1.6637E-9:0:0:0:0:20 1/1:35:12:1:11:15:100%:64:3.698E-7:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:11:0:11:13:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:14:0:14:15:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:17:2:15:18:100%:93:4.2852E-10:0:0:0:0:19 1/1:34:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:14:0:14:15:100%:76:2.4927E-8:0:0:0:0:16 0/1:33:7:1:6:9:87.5%:35:2.9138E-4:0:0:0:0:9 1/1:36:6:0:6:7:100%:29:1.0823E-3:0:0:0:0:7 1/1:36:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:26:3:23:28:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:22:2:20:23:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:24:2:22:28:100%:99:3.101E-14:0:0:0:0:29 1/1:35:11:1:10:12:100%:58:1.4176E-6:0:0:0:0:12 1/1:39:12:1:11:13:100%:64:3.698E-7:0:0:0:0:13 1/1:35:16:1:15:17:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:35:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:21:1:20:22:100%:99:1.8578E-12:0:0:0:0:23 1/1:35:18:0:18:21:100%:99:1.1019E-10:0:0:0:0:23 1/1:37:22:0:22:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:34:8:1:7:11:100%:41:7.77E-5:0:0:0:0:13 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:23:2:21:24:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:12:0:12:13:100%:64:3.698E-7:0:0:0:0:13 1/1:36:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:15:1:14:17:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:14:1:13:15:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:13:1:12:15:100%:70:9.6148E-8:0:0:0:0:16 1/1:39:11:1:10:14:100%:58:1.4176E-6:0:0:0:0:14 1/1:35:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:15:1:14:16:100%:81:6.4467E-9:0:0:0:0:17 1/1:34:23:2:21:24:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:20:2:18:21:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:17:1:16:19:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:7:0:7:10:100%:35:2.9138E-4:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:0:8:9:100%:41:7.77E-5:0:0:0:0:10 1/1:36:11:2:9:13:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:9:0:9:11:100%:46:2.0568E-5:0:0:0:0:11 1/1:36:11:1:10:13:100%:58:1.4176E-6:0:0:0:0:14 1/1:37:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:12:2:10:13:100%:64:3.698E-7:0:0:0:0:15 1/1:34:14:2:12:15:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:17:0:17:18:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:12:0:12:13:100%:64:3.698E-7:0:0:0:0:14 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:14 1/1:35:14:1:13:17:100%:76:2.4927E-8:0:0:0:0:17 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:33:10:1:9:11:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:8:0:8:9:100%:41:7.77E-5:0:0:0:0:9 1/1:34:18:4:14:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:13:0:13:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:20:1:19:21:100%:99:7.2544E-12:0:0:0:0:22 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:15:0:15:16:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:13:2:11:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:12:1:11:13:100%:64:3.698E-7:0:0:0:0:15 1/1:35:8:1:7:10:100%:41:7.77E-5:0:0:0:0:10 1/1:32:11:0:11:13:100%:58:1.4176E-6:0:0:0:0:14 1/1:36:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:20:0:20:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:25:1:24:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:25:1:24:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:12:0:12:13:100%:64:3.698E-7:0:0:0:0:13 1/1:35:21:2:19:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:33:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:15:0:15:18:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:15:1:14:17:100%:81:6.4467E-9:0:0:0:0:18 1/1:37:17:1:16:18:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:30:1:29:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:20:4:16:22:100%:99:7.2544E-12:0:0:0:0:23 1/1:36:21:0:21:23:100%:99:1.8578E-12:0:0:0:0:24 1/1:33:8:0:8:9:100%:41:7.77E-5:0:0:0:0:9 1/1:40:16:2:14:17:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:9:0:9:10:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:14:0:14:15:100%:76:2.4927E-8:0:0:0:0:17 1/1:34:11:0:11:13:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:20:1:19:21:100%:99:7.2544E-12:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:3:8:14:100%:58:1.4176E-6:0:0:0:0:14 1/1:34:20:3:17:22:100%:99:7.2544E-12:0:0:0:0:23 1/1:35:16:0:16:17:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:11:0:11:13:100%:58:1.4176E-6:0:0:0:0:13 1/1:34:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:12:0:12:13:100%:64:3.698E-7:0:0:0:0:13 1/1:35:11:0:11:12:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:2:11:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:13:0:13:15:100%:70:9.6148E-8:0:0:0:0:16 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:37:8:0:8:10:100%:41:7.77E-5:0:0:0:0:10 1/1:37:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:9:0:9:11:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:8:0:8:11:100%:41:7.77E-5:0:0:0:0:12 1/1:34:10:1:9:11:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:18:2:16:20:100%:99:1.1019E-10:0:0:0:0:22 1/1:34:12:1:11:13:100%:64:3.698E-7:0:0:0:0:13 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:16:2:14:17:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:15:0:15:17:100%:81:6.4467E-9:0:0:0:0:18 1/1:36:18:0:18:21:100%:99:1.1019E-10:0:0:0:0:22 1/1:35:10:1:9:11:100%:52:5.4125E-6:0:0:0:0:11 MTB_anc 3941923 . A C . PASS AC=8;AF=0.027;AN=292;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941923A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941923A>C||||||,C|intergenic_region|MODIFIER|PE_PGRS55_Rv3511-PE_PGRS56_Rv3512|gene3584-gene3585|intergenic_region|gene3584-gene3585|||n.3941923A>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:27 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:8 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:35 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:16:0%:29:1E0:39:16:3:13:16 0/0:0:0:0:0:14:0%:25:1E0:36:14:3:11:14 0/0:0:0:0:0:19:0%:37:1E0:41:19:4:15:21 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:10 0/0:0:0:0:0:16:0%:29:1E0:37:16:3:13:17 0/0:0:0:0:0:23:0%:44:1E0:37:23:4:19:23 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:13 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:21 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 0/0:0:0:0:0:27:0%:52:1E0:37:27:10:17:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:41:9:2:7:16:56.25%:33:4.0786E-4:35:7:1:6:16 0/0:0:0:0:0:10:0%:17:1E0:41:10:2:8:10 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:9 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:9 0/0:40:5:0:5:11:45.45%:3:1.7544E-2:36:6:0:6:11 0/1:39:8:4:4:9:88.89%:36:2.0568E-4:38:1:0:1:10 0/0:0:0:0:0:20:0%:36:1E0:41:20:6:14:20 0/0:26:1:0:1:8:12.5%:8:5E-1:40:7:3:4:8 0/0:0:0:0:0:17:0%:33:1E0:39:17:6:11:17 0/0:0:0:0:0:24:0%:44:1E0:37:24:8:16:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:23 0/0:0:0:0:0:9:0%:18:1E0:43:9:3:6:11 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:18 0/0:0:0:0:0:20:0%:36:1E0:41:20:6:14:21 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:17:0%:33:1E0:40:17:5:12:18 0/1:35:12:4:8:21:57.14%:45:2.658E-5:38:9:1:8:21 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:16 0/0:0:0:0:0:15:0%:29:1E0:40:15:4:11:15 0/1:38:9:3:6:12:75%:37:1.6826E-4:35:3:0:3:13 0/0:0:0:0:0:26:0%:47:1E0:40:26:8:18:27 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:28 0/0:0:0:0:0:32:0%:59:1E0:38:32:10:22:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:6:21:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:9:19:28 0/1:39:12:5:7:18:70.59%:49:1.1285E-5:41:5:0:5:19 0/0:0:0:0:0:22:0%:40:1E0:37:22:9:13:22 0/0:0:0:0:0:20:0%:36:1E0:36:20:4:16:21 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:19 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:25 0/0:0:0:0:0:24:0%:44:1E0:39:24:9:15:24 0/1:43:8:2:6:23:34.78%:27:1.8791E-3:37:15:1:14:23 0/0:0:0:0:0:22:0%:40:1E0:43:22:6:16:23 0/0:0:0:0:0:25:0%:48:1E0:35:25:2:23:25 0/0:0:0:0:0:12:0%:21:1E0:41:12:3:9:13 0/0:0:0:0:0:9:0%:18:1E0:44:9:1:8:10 0/0:0:0:0:0:26:0%:47:1E0:38:26:8:18:26 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:13 0/0:0:0:0:0:12:0%:21:1E0:34:12:4:8:12 0/0:0:0:0:0:22:0%:40:1E0:41:22:8:14:23 0/0:0:0:0:0:20:0%:36:1E0:37:20:4:16:20 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:28:0%:51:1E0:36:28:11:17:28 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:19 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:15 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:17 0/0:0:0:0:0:11:0%:22:1E0:43:11:1:10:11 0/0:0:0:0:0:17:0%:33:1E0:40:17:3:14:17 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:26 0/0:36:1:0:1:27:3.7%:41:5E-1:37:26:9:17:28 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:20 0/0:0:0:0:0:23:0%:44:1E0:38:23:4:19:23 0/0:0:0:0:0:10:0%:17:1E0:40:10:1:9:10 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:10 0/0:0:0:0:0:16:0%:29:1E0:39:16:4:12:16 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:20 0/0:0:0:0:0:10:0%:17:1E0:43:10:1:9:10 0/0:0:0:0:0:13:0%:25:1E0:40:13:6:7:14 0/0:0:0:0:0:21:0%:40:1E0:40:21:7:14:21 0/0:0:0:0:0:24:0%:44:1E0:37:24:3:21:24 0/0:0:0:0:0:15:0%:29:1E0:36:15:5:10:15 0/0:0:0:0:0:11:0%:22:1E0:40:11:4:7:12 0/0:0:0:0:0:19:0%:37:1E0:35:19:2:17:20 0/0:0:0:0:0:21:0%:40:1E0:40:21:5:16:22 0/0:0:0:0:0:21:0%:40:1E0:37:21:5:16:21 0/0:0:0:0:0:30:0%:55:1E0:37:30:7:23:30 0/0:0:0:0:0:18:0%:32:1E0:37:18:3:15:18 0/0:0:0:0:0:11:0%:22:1E0:38:11:6:5:12 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:10 0/0:36:5:2:3:13:38.46%:4:1.9565E-2:39:8:1:7:13 0/1:36:11:4:7:21:52.38%:40:8.2399E-5:35:10:1:9:21 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:9 0/0:0:0:0:0:18:0%:32:1E0:39:18:4:14:19 0/0:0:0:0:0:24:0%:44:1E0:39:24:7:17:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:4:19:23 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:18 0/0:0:0:0:0:22:0%:40:1E0:38:22:5:17:22 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:16 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:26 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 0/0:0:0:0:0:17:0%:33:1E0:35:17:5:12:17 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:3:22:27 0/0:0:0:0:0:26:0%:47:1E0:38:26:6:20:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:4:22:26 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:39 0/0:0:0:0:0:23:0%:44:1E0:37:23:4:19:23 0/0:0:0:0:0:21:0%:40:1E0:38:21:5:16:21 0/0:0:0:0:0:9:0%:18:1E0:42:9:2:7:9 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:12 0/0:0:0:0:0:21:0%:40:1E0:37:21:4:17:23 0/0:0:0:0:0:31:0%:59:1E0:36:31:10:21:32 0/0:0:0:0:0:34:0%:62:1E0:41:34:11:23:36 0/0:0:0:0:0:33:0%:63:1E0:38:33:10:23:33 0/0:0:0:0:0:25:0%:48:1E0:36:25:5:20:28 0/0:38:1:0:1:35:2.86%:55:5E-1:37:34:8:26:35 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:12 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:23 0/0:0:0:0:0:16:0%:29:1E0:39:16:7:9:16 0/0:0:0:0:0:17:0%:33:1E0:39:17:3:14:18 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:16 0/0:0:0:0:0:35:0%:67:1E0:38:35:7:28:35 0/0:0:0:0:0:9:0%:18:1E0:37:9:3:6:11 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:36:31:10:21:32 0/0:0:0:0:0:23:0%:44:1E0:39:23:7:16:25 0/0:0:0:0:0:11:0%:22:1E0:37:11:2:9:12 0/0:0:0:0:0:19:0%:37:1E0:37:19:5:14:20 0/1:36:9:3:6:13:69.23%:36:2.2883E-4:36:4:0:4:13 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:16 0/0:0:0:0:0:12:0%:21:1E0:40:12:2:10:13 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:12 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:11 0/0:0:0:0:0:13:0%:25:1E0:40:13:2:11:13 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:13 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:19 0/0:0:0:0:0:20:0%:36:1E0:34:20:6:14:21 0/0:0:0:0:0:15:0%:29:1E0:40:15:1:14:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:24 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:27 0/0:0:0:0:0:14:0%:25:1E0:42:14:3:11:15 0/0:0:0:0:0:12:0%:21:1E0:39:12:3:9:12 0/0:0:0:0:0:15:0%:29:1E0:37:15:7:8:15 0/0:0:0:0:0:18:0%:32:1E0:37:18:5:13:19 0/0:0:0:0:0:22:0%:40:1E0:37:22:8:14:22 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:11 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:20 0/0:0:0:0:0:15:0%:29:1E0:41:15:4:11:15 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:14 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:20 0/0:0:0:0:0:30:0%:55:1E0:36:30:8:22:30 0/0:0:0:0:0:40:0%:74:1E0:38:40:11:29:41 0/0:0:0:0:0:17:0%:33:1E0:38:17:3:14:18 MTB_anc 3941932 . A C . PASS AC=10;AF=0.034;AN=296;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3941932A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3941932A>C||||||,C|intergenic_region|MODIFIER|PE_PGRS55_Rv3511-PE_PGRS56_Rv3512|gene3584-gene3585|intergenic_region|gene3584-gene3585|||n.3941932A>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:26:0%:47:1E0:36:26:7:19:26 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:9 0/0:0:0:0:0:37:0%:70:1E0:44:37:11:26:38 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:16 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:11 0/0:0:0:0:0:17:0%:33:1E0:43:17:4:13:18 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:10 0/0:0:0:0:0:18:0%:32:1E0:39:18:4:14:18 0/0:0:0:0:0:21:0%:40:1E0:37:21:3:18:21 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:15 0/0:0:0:0:0:23:0%:44:1E0:36:23:10:13:23 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:13 0/0:0:0:0:0:26:0%:47:1E0:36:26:10:16:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:39:10:3:7:16:62.5%:39:1.2413E-4:34:6:1:5:16 0/0:0:0:0:0:10:0%:17:1E0:41:10:2:8:10 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:9 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:10 0/1:39:6:1:5:11:54.55%:22:6.192E-3:36:5:0:5:11 0/1:39:8:4:4:10:80%:34:3.5723E-4:37:2:0:2:10 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:22 0/0:0:0:0:0:9:0%:14:1E0:39:8:4:4:9 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:15 0/0:0:0:0:0:25:0%:48:1E0:37:25:11:14:26 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:25 0/0:0:0:0:0:9:0%:18:1E0:39:9:3:6:10 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:18 0/0:0:0:0:0:21:0%:40:1E0:40:21:6:15:22 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 0/0:0:0:0:0:18:0%:32:1E0:39:18:6:12:21 0/1:37:12:5:7:19:63.16%:47:1.8611E-5:40:7:1:6:22 0/0:0:0:0:0:16:0%:29:1E0:35:16:7:9:16 0/0:0:0:0:0:15:0%:29:1E0:41:15:4:11:15 0/1:37:10:3:7:13:76.92%:42:5.3843E-5:38:3:0:3:13 0/0:0:0:0:0:23:0%:44:1E0:40:23:7:16:27 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:27 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:30 0/0:0:0:0:0:26:0%:47:1E0:39:26:7:19:27 0/0:0:0:0:0:27:0%:52:1E0:36:27:9:18:27 0/1:37:15:6:9:20:75%:64:3.8543E-7:35:5:0:5:20 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:4:15:21 0/0:0:0:0:0:18:0%:32:1E0:36:18:7:11:18 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:26 0/0:0:0:0:0:23:0%:44:1E0:40:23:8:15:24 0/1:42:7:2:5:19:36.84%:23:3.9926E-3:38:12:0:12:21 0/0:0:0:0:0:24:0%:44:1E0:40:24:7:17:25 0/0:0:0:0:0:24:0%:44:1E0:36:24:2:22:24 0/0:0:0:0:0:13:0%:25:1E0:41:13:4:9:14 0/0:0:0:0:0:9:0%:18:1E0:43:9:1:8:9 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:26 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:11 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:11 0/0:0:0:0:0:19:0%:37:1E0:42:19:6:13:20 0/0:0:0:0:0:19:0%:37:1E0:38:19:3:16:19 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:21 0/0:0:0:0:0:7:0%:14:1E0:38:7:1:6:7 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:27 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:21 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:13 0/0:0:0:0:0:19:0%:37:1E0:38:19:7:12:20 0/0:0:0:0:0:12:0%:21:1E0:40:12:2:10:12 0/0:0:0:0:0:16:0%:29:1E0:40:16:3:13:16 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:25 0/0:38:1:0:1:25:4%:38:5E-1:37:24:8:16:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 0/0:0:0:0:0:23:0%:44:1E0:38:23:5:18:23 0/0:0:0:0:0:10:0%:17:1E0:40:10:1:9:10 0/0:0:0:0:0:8:0%:14:1E0:41:8:3:5:9 0/0:0:0:0:0:15:0%:29:1E0:39:15:3:12:16 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:22 0/0:0:0:0:0:11:0%:22:1E0:44:11:1:10:11 0/0:0:0:0:0:13:0%:25:1E0:40:13:6:7:13 0/0:0:0:0:0:21:0%:40:1E0:39:21:7:14:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:5:18:23 0/0:0:0:0:0:14:0%:25:1E0:38:14:4:10:15 0/0:0:0:0:0:11:0%:22:1E0:40:11:4:7:11 0/0:0:0:0:0:17:0%:33:1E0:36:17:1:16:17 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:6:12:20 0/0:0:0:0:0:26:0%:47:1E0:37:26:7:19:27 0/0:0:0:0:0:16:0%:29:1E0:38:16:1:15:16 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:13 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:9 0/1:35:7:4:3:13:53.85%:25:2.6087E-3:41:6:1:5:13 0/1:36:13:6:7:21:61.9%:50:7.9741E-6:36:8:1:7:21 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:9 0/0:0:0:0:0:19:0%:37:1E0:39:19:5:14:19 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:25 0/0:0:0:0:0:19:0%:37:1E0:41:19:4:15:19 0/0:0:0:0:0:20:0%:36:1E0:40:20:9:11:20 0/0:0:0:0:0:22:0%:40:1E0:39:22:6:16:22 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:17 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:26 0/0:0:0:0:0:11:0%:22:1E0:38:11:4:7:11 0/0:0:0:0:0:15:0%:29:1E0:35:15:5:10:17 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:24:0%:44:1E0:37:24:4:20:24 0/0:0:0:0:0:27:0%:52:1E0:38:27:7:20:28 0/0:0:0:0:0:22:0%:40:1E0:40:22:4:18:23 0/0:0:0:0:0:38:0%:70:1E0:38:38:13:25:41 0/0:0:0:0:0:22:0%:40:1E0:37:22:4:18:23 0/0:0:0:0:0:20:0%:36:1E0:38:20:6:14:21 0/0:0:0:0:0:8:0%:14:1E0:42:8:2:6:8 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:14 0/0:0:0:0:0:25:0%:48:1E0:35:25:5:20:26 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:34 0/0:0:0:0:0:32:0%:59:1E0:38:32:10:22:32 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:28 0/0:0:0:0:0:34:0%:62:1E0:37:34:9:25:34 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:12 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:26 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:16 0/0:0:0:0:0:16:0%:29:1E0:39:16:4:12:17 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:16 0/0:0:0:0:0:33:0%:63:1E0:38:33:8:25:34 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:10 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:29 0/0:0:0:0:0:29:0%:55:1E0:38:29:10:19:30 0/0:0:0:0:0:24:0%:44:1E0:39:24:8:16:26 0/0:0:0:0:0:13:0%:25:1E0:34:13:2:11:13 0/0:0:0:0:0:15:0%:29:1E0:38:15:4:11:17 0/1:37:8:2:6:11:72.73%:32:5.16E-4:35:3:0:3:12 0/0:0:0:0:0:15:0%:29:1E0:34:15:3:12:15 0/0:0:0:0:0:12:0%:21:1E0:39:12:3:9:12 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:14 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:10 0/0:0:0:0:0:12:0%:21:1E0:38:12:2:10:12 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:12 0/0:0:0:0:0:17:0%:33:1E0:35:17:6:11:18 0/0:0:0:0:0:17:0%:33:1E0:35:17:6:11:19 0/0:0:0:0:0:17:0%:33:1E0:38:17:1:16:18 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:8 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:24 0/0:0:0:0:0:14:0%:25:1E0:42:14:3:11:15 0/0:0:0:0:0:12:0%:21:1E0:38:12:3:9:12 0/0:0:0:0:0:15:0%:29:1E0:38:15:9:6:15 0/0:0:0:0:0:20:0%:36:1E0:37:20:6:14:20 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:22 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:11 0/0:37:1:0:1:16:6.25%:21:5E-1:37:15:3:12:16 0/0:0:0:0:0:15:0%:29:1E0:42:15:4:11:15 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:15 0/0:0:0:0:0:20:0%:36:1E0:37:20:7:13:21 0/0:0:0:0:0:27:0%:52:1E0:37:27:9:18:28 0/0:0:0:0:0:37:0%:70:1E0:39:37:11:26:39 0/0:0:0:0:0:18:0%:32:1E0:37:18:4:14:20 MTB_anc 3943172 . C CGGAG . PASS AC=112;AF=0.683;AN=164;ANN=CGGAG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3943172_3943173insGGAG||||||,CGGAG|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3943172_3943173insGGAG||||||,CGGAG|intergenic_region|MODIFIER|PE_PGRS55_Rv3511-PE_PGRS56_Rv3512|gene3584-gene3585|intergenic_region|gene3584-gene3585|||n.3943172_3943173insGGAG||||||;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:8:3:5:10:80%:34:3.5723E-4:37:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:7:2:5:12:58.33%:27:1.935E-3:36:4:1:3:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:1:8:10:90%:42:5.9538E-5:33:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:13:3:10:16:81.25%:57:1.6121E-6:31:3:2:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:21:5:16:22:91.3%:99:3.6437E-11:29:2:0:2:23 0/1:35:9:3:6:11:81.82%:39:1.1057E-4:37:2:2:0:11 0/1:35:8:2:6:10:80%:34:3.5723E-4:35:2:0:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:7:4:3:8:77.78%:29:1.1312E-3:38:2:0:2:9 0/1:39:6:2:4:9:66.67%:23:4.5249E-3:36:3:3:0:9 1/1:39:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:13:1:12:15:81.25%:57:1.6121E-6:35:3:1:2:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:11:3:8:18:61.11%:42:5.2969E-5:33:7:2:5:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:7:1:6:11:63.64%:27:1.935E-3:37:4:4:0:11 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:36:10:2:8:12:83.33%:44:3.3652E-5:33:2:0:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. 0/1:34:11:3:8:13:78.57%:47:1.6951E-5:43:3:2:1:14 0/1:35:8:2:6:11:72.73%:32:5.16E-4:35:3:2:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:13:5:8:13:92.86%:64:3.7391E-7:36:1:1:0:14 1/1:38:12:3:9:13:92.31%:58:1.3461E-6:32:1:1:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:33:8:0:8:9:80%:34:3.5723E-4:34:2:1:1:10 0/1:34:13:1:12:15:76.47%:55:2.5647E-6:36:4:1:3:17 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:37:10:2:8:17:58.82%:38:1.4831E-4:36:7:6:1:17 0/1:37:6:0:6:9:66.67%:23:4.5249E-3:33:3:0:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:34:12:2:10:14:80%:52:5.2605E-6:38:3:1:2:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:9:3:6:13:69.23%:36:2.2883E-4:34:4:2:2:13 1/1:33:12:0:12:10:100%:64:3.698E-7:0:0:0:0:12 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:34:8:0:8:9:88.89%:36:2.0568E-4:27:1:1:0:9 0/1:37:8:1:7:9:88.89%:36:2.0568E-4:33:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:37:14:1:13:16:87.5%:65:2.5454E-7:35:2:2:0:16 1/1:36:9:2:7:10:90%:42:5.9538E-5:36:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:1:5:7:85.71%:26:2.331E-3:36:1:1:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:36:8:1:7:11:72.73%:32:5.16E-4:33:3:1:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:8:2:6:8:88.89%:36:2.0568E-4:38:1:0:1:9 0/1:37:12:4:8:14:80%:52:5.2605E-6:32:3:1:2:15 1/1:36:14:4:10:14:93.33%:69:1.0315E-7:36:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:3:8:12:91.67%:53:4.8074E-6:33:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:34:9:1:8:11:75%:37:1.6826E-4:35:3:1:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:10:1:9:13:71.43%:41:7.6278E-5:34:4:1:3:14 0/1:35:7:2:5:9:77.78%:29:1.1312E-3:35:2:0:2:9 0/1:39:15:5:10:17:88.24%:71:7.3277E-8:36:2:2:0:17 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:37:7:2:5:9:77.78%:29:1.1312E-3:38:2:0:2:9 1/1:37:11:3:8:12:91.67%:53:4.8074E-6:32:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:15:5:10:20:75%:64:3.8543E-7:34:5:1:4:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:40:8:1:7:13:61.54%:30:8.238E-4:36:5:2:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:35:13:0:13:16:81.25%:57:1.6121E-6:35:3:0:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:15:2:13:16:93.75%:75:2.8282E-8:34:1:0:1:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:34:12:2:10:13:85.71%:55:2.9913E-6:37:2:1:1:14 0/1:36:18:5:13:20:85.71%:84:3.7603E-9:31:3:1:2:21 1/1:32:9:1:8:7:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:1:8:10:90%:42:5.9538E-5:32:1:1:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:17:4:13:20:85%:78:1.2848E-8:36:3:1:2:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:14:3:11:18:77.78%:60:8.0605E-7:35:4:0:4:18 0/1:38:19:4:15:22:86.36%:89:1.0931E-9:36:3:1:2:22 1/1:37:9:2:7:10:90%:42:5.9538E-5:36:1:1:0:10 1/1:36:16:2:14:16:94.12%:81:7.7134E-9:38:1:1:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 0/1:37:7:1:6:9:77.78%:29:1.1312E-3:36:2:2:0:9 1/1:33:19:1:18:18:95%:98:1.5234E-10:34:1:0:1:20 0/1:38:13:3:10:18:72.22%:54:3.7078E-6:27:5:4:1:18 1/1:35:21:9:12:21:95.45%:99:1.0931E-11:33:1:0:1:22 0/1:35:7:1:6:8:87.5%:31:6.993E-4:38:1:0:1:8 0/1:37:8:2:6:9:88.89%:36:2.0568E-4:37:1:1:0:9 0/1:38:12:3:9:14:85.71%:55:2.9913E-6:36:2:0:2:14 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:9:1:8:13:69.23%:36:2.2883E-4:35:4:0:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:13:0:13:18:72.22%:54:3.7078E-6:34:5:1:4:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:0:14:15:93.33%:69:1.0315E-7:34:1:1:0:15 0/1:36:9:1:8:11:81.82%:39:1.1057E-4:35:2:0:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:41:6:0:6:8:75%:24:3.4965E-3:32:2:1:1:8 0/0:36:2:0:2:8:25%:5:2.3333E-1:36:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:4:7:12:91.67%:53:4.8074E-6:36:1:1:0:12 1/1:33:12:2:10:11:92.31%:58:1.3461E-6:36:1:0:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:12:3:9:13:92.31%:58:1.3461E-6:36:1:1:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:36:8:1:7:9:88.89%:36:2.0568E-4:33:1:0:1:9 0/1:37:6:3:3:8:75%:24:3.4965E-3:32:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 3943174 . CCCCA C . PASS AC=146;AF=0.961;AN=152;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3943175_3943178delCCCA||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3943175_3943178delCCCA||||||,C|intergenic_region|MODIFIER|PE_PGRS55_Rv3511-PE_PGRS56_Rv3512|gene3584-gene3585|intergenic_region|gene3584-gene3585|||n.3943175_3943178delCCCA||||||;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:33:8:3:5:7:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:13:3:10:11:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:21:5:16:21:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:6:2:4:7:85.71%:29:1.0823E-3:0:0:0:0:7 1/1:37:10:5:5:9:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:13:1:12:12:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:2:8:11:90.91%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. 1/1:33:11:3:8:10:100%:58:1.4176E-6:0:0:0:0:11 1/1:32:8:2:6:7:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:13:5:8:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:12:3:9:11:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:36:6:0:6:8:75%:29:1.0823E-3:0:0:0:0:8 ./. ./. 1/1:32:12:2:10:10:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:9:3:6:9:90%:46:2.0568E-5:0:0:0:0:10 1/1:30:12:0:12:9:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:34:8:0:8:9:88.89%:41:7.77E-5:0:0:0:0:9 0/1:35:8:1:7:9:88.89%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:32:10:2:8:8:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:14:1:13:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:12:4:8:11:100%:64:3.698E-7:0:0:0:0:12 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:11:3:8:10:100%:58:1.4176E-6:0:0:0:0:11 ./. 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:10:2:8:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:34:15:5:10:17:88.24%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:39:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:33:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:32:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:18:5:13:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:33:9:1:8:8:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:9:1:8:8:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:19:4:15:19:95%:99:2.8292E-11:0:0:0:0:20 1/1:35:9:2:7:10:90%:46:2.0568E-5:0:0:0:0:10 1/1:35:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 0/1:33:7:1:6:7:87.5%:35:2.9138E-4:0:0:0:0:8 1/1:33:19:1:18:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:13:3:10:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:32:21:9:12:19:100%:99:1.8578E-12:0:0:0:0:21 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:13:0:13:12:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:9:1:8:8:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:12:2:10:11:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. MTB_anc 3943626 . G A . PASS AC=280;AF=1.00;AN=280;ANN=A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3943626G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3943626G>A||||||,A|intergenic_region|MODIFIER|PE_PGRS55_Rv3511-PE_PGRS56_Rv3512|gene3584-gene3585|intergenic_region|gene3584-gene3585|||n.3943626G>A||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:17:5:12:18:94.44%:86:2.0936E-9:39:1:0:1:18 1/1:39:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:11:4:7:12:91.67%:53:4.8074E-6:39:1:0:1:12 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:17:5:12:18:94.44%:93:4.2852E-10:0:0:0:0:20 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:5:19:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:36:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:21:10:11:22:95.45%:99:1.0931E-11:33:1:1:0:22 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:16:5:11:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:36:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:28 1/1:37:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:37:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 MTB_anc 3943704 . A G . PASS AC=274;AF=1.00;AN=274;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3943704A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3943704A>G||||||,G|intergenic_region|MODIFIER|PE_PGRS55_Rv3511-PE_PGRS56_Rv3512|gene3584-gene3585|intergenic_region|gene3584-gene3585|||n.3943704A>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:37:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:23:8:15:24:100%:99:1.2146E-13:0:0:0:0:26 1/1:38:27:5:22:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:34:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:34:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:34:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:18:10:8:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:13:8:5:14:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:37:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:27:15:12:28:96.43%:99:3.7915E-15:33:1:0:1:29 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3943771 . CCGGCAACGGCGGCAACGG C . PASS AC=1;AF=3.546e-03;AN=282;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3943772_3943789delCGGCAACGGCGGCAACGG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3943772_3943789delCGGCAACGGCGGCAACGG||||||,C|intergenic_region|MODIFIER|PE_PGRS55_Rv3511-PE_PGRS56_Rv3512|gene3584-gene3585|intergenic_region|gene3584-gene3585|||n.3943772_3943789delCGGCAACGGCGGCAACGG||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:25:1:1:0:27:3.85%:38:5E-1:34:25:6:19:30 0/0:0:0:0:0:7:0%:14:1E0:32:7:3:4:7 0/0:0:0:0:0:21:0%:40:1E0:37:21:10:11:23 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:12 0/0:0:0:0:0:17:0%:33:1E0:34:17:10:7:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:14 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:10 0/0:0:0:0:0:14:0%:25:1E0:35:14:6:8:19 0/0:0:0:0:0:15:0%:29:1E0:37:15:4:11:15 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:14 0/0:0:0:0:0:21:0%:40:1E0:34:21:7:14:23 0/0:0:0:0:0:12:0%:21:1E0:34:12:6:6:12 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:17 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:13 0/0:0:0:0:0:10:0%:17:1E0:38:10:4:6:10 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:9 0/0:0:0:0:0:7:0%:14:1E0:36:7:4:3:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:11 0/0:0:0:0:0:8:0%:14:1E0:33:8:3:5:9 0/0:0:0:0:0:24:0%:44:1E0:37:24:5:19:25 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:7 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:18 0/0:0:0:0:0:26:0%:47:1E0:35:26:8:18:28 0/0:0:0:0:0:17:0%:33:1E0:38:17:4:13:19 0/0:0:0:0:0:12:0%:21:1E0:42:12:7:5:13 0/0:0:0:0:0:18:0%:32:1E0:35:18:9:9:19 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:22 0/0:0:0:0:0:28:0%:51:1E0:37:28:6:22:31 0/0:0:0:0:0:24:0%:44:1E0:39:24:11:13:24 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:19 0/0:0:0:0:0:13:0%:25:1E0:39:13:4:9:13 0/0:0:0:0:0:12:0%:21:1E0:35:12:5:7:12 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:11 0/0:0:0:0:0:24:0%:44:1E0:35:24:8:16:25 0/0:0:0:0:0:27:0%:52:1E0:36:27:8:19:29 0/0:0:0:0:0:21:0%:40:1E0:37:21:8:13:23 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 0/0:0:0:0:0:24:0%:44:1E0:36:24:7:17:26 0/0:0:0:0:0:20:0%:36:1E0:36:20:9:11:21 0/0:0:0:0:0:22:0%:40:1E0:38:22:10:12:22 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:18 0/0:0:0:0:0:16:0%:29:1E0:40:16:9:7:18 0/0:0:0:0:0:20:0%:36:1E0:39:20:7:13:21 0/0:0:0:0:0:28:0%:51:1E0:35:28:9:19:30 0/0:0:0:0:0:17:0%:33:1E0:36:17:6:11:18 0/0:0:0:0:0:14:0%:25:1E0:34:14:4:10:14 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:25 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:24 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:0:0:0:0:7:0%:14:1E0:41:7:4:3:9 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:19 0/0:0:0:0:0:14:0%:25:1E0:37:14:3:11:16 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:24 0/0:0:0:0:0:14:0%:25:1E0:35:14:6:8:14 0/0:0:0:0:0:19:0%:37:1E0:38:19:8:11:21 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:23 0/0:0:0:0:0:13:0%:25:1E0:37:13:7:6:14 0/0:0:0:0:0:15:0%:29:1E0:35:15:4:11:17 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:14 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:16 0/0:0:0:0:0:12:0%:21:1E0:35:12:4:8:13 0/0:0:0:0:0:28:0%:51:1E0:37:28:10:18:29 0/0:0:0:0:0:17:0%:33:1E0:40:17:8:9:18 0/0:0:0:0:0:24:0%:44:1E0:34:23:14:9:24 0/0:0:0:0:0:16:0%:29:1E0:35:16:3:13:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:34:16:6:10:16 0/0:0:0:0:0:10:0%:17:1E0:42:10:2:8:13 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:17 0/0:0:0:0:0:17:0%:33:1E0:35:17:9:8:18 0/0:0:0:0:0:20:0%:36:1E0:39:20:5:15:24 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:15 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:26 0/0:0:0:0:0:12:0%:21:1E0:40:12:5:7:12 0/0:0:0:0:0:23:0%:44:1E0:37:23:8:15:24 0/0:0:0:0:0:12:0%:21:1E0:34:12:4:8:14 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:20 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:32 0/0:0:0:0:0:24:0%:44:1E0:35:24:7:17:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:5:18:23 0/0:0:0:0:0:7:0%:14:1E0:40:7:4:3:9 0/0:0:0:0:0:18:0%:32:1E0:36:18:6:12:19 0/0:0:0:0:0:14:0%:25:1E0:34:14:5:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:20:0%:36:1E0:37:20:5:15:20 0/0:0:0:0:0:11:0%:22:1E0:38:11:3:8:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:5:6:11 0/0:0:0:0:0:14:0%:25:1E0:36:14:2:12:14 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:21 0/0:0:0:0:0:10:0%:17:1E0:38:10:2:8:11 0/0:0:0:0:0:33:0%:59:1E0:38:32:12:20:36 0/0:0:0:0:0:15:0%:29:1E0:39:15:5:10:15 0/0:0:0:0:0:15:0%:29:1E0:34:15:7:8:15 0/0:0:0:0:0:21:0%:40:1E0:34:21:6:15:23 0/0:0:0:0:0:16:0%:29:1E0:34:16:10:6:16 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:22 0/0:0:0:0:0:18:0%:32:1E0:35:18:6:12:20 0/0:0:0:0:0:19:0%:37:1E0:36:19:6:13:22 0/0:0:0:0:0:16:0%:29:1E0:35:16:4:12:16 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:11 0/0:0:0:0:0:25:0%:48:1E0:37:25:4:21:27 0/0:0:0:0:0:16:0%:29:1E0:36:16:7:9:17 0/1:37:23:5:18:26:88.46%:99:7.3681E-12:36:3:0:3:26 0/0:0:0:0:0:37:0%:70:1E0:36:37:16:21:40 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:16 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:31 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:21 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:22 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:16 0/0:0:0:0:0:21:0%:40:1E0:33:21:9:12:24 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:12 0/0:0:0:0:0:19:0%:37:1E0:35:19:8:11:21 0/0:0:0:0:0:11:0%:22:1E0:36:11:6:5:12 0/0:0:0:0:0:28:0%:51:1E0:40:28:10:18:30 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:25 0/0:0:0:0:0:23:0%:44:1E0:36:23:11:12:24 0/0:0:0:0:0:17:0%:33:1E0:35:17:9:8:20 0/0:0:0:0:0:9:0%:18:1E0:35:9:6:3:10 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:12 0/0:0:0:0:0:14:0%:25:1E0:33:14:3:11:16 0/0:0:0:0:0:16:0%:29:1E0:36:16:3:13:16 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:14 0/0:0:0:0:0:8:0%:14:1E0:34:8:4:4:8 0/0:0:0:0:0:8:0%:14:1E0:38:8:2:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:34:7:3:4:7 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:11 0/0:0:0:0:0:14:0%:25:1E0:34:14:4:10:14 0/0:0:0:0:0:10:0%:17:1E0:36:10:4:6:10 0/0:0:0:0:0:8:0%:14:1E0:35:8:1:7:8 0/0:0:0:0:0:12:0%:21:1E0:37:12:7:5:12 0/0:0:0:0:0:13:0%:25:1E0:36:13:5:8:13 0/0:0:0:0:0:20:0%:36:1E0:38:20:12:8:21 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:15 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:12 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:19 0/0:0:0:0:0:20:0%:36:1E0:37:20:11:9:20 0/0:0:0:0:0:23:0%:44:1E0:38:23:11:12:25 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:13 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:15 0/0:0:0:0:0:19:0%:37:1E0:35:19:9:10:20 0/0:0:0:0:0:13:0%:25:1E0:38:13:4:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3943842 . AGCGGCAACG A . PASS AC=3;AF=0.012;AN=256;ANN=A|disruptive_inframe_deletion|MODERATE|PE_PGRS56_Rv3512|gene3585|transcript|Transcript_gene3585|Coding|1/1|c.47_55delACGGCGGCA|p.Asn16_Gly18del|47/1152|47/1152|16/383||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3943843_3943851delGCGGCAACG||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3943843_3943851delGCGGCAACG||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:17:0%:33:1E0:35:17:1:16:21 0/0:0:0:0:0:9:0%:14:1E0:33:8:4:4:9 0/0:0:0:0:0:12:0%:21:1E0:35:12:4:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:25:1E0:33:13:3:10:13 0/0:0:0:0:0:8:0%:14:1E0:36:8:0:8:8 0/0:0:0:0:0:8:0%:14:1E0:37:8:2:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:17 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:13 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:12 0/0:0:0:0:0:9:0%:18:1E0:38:9:2:7:15 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:15 0/0:0:0:0:0:18:0%:32:1E0:35:18:3:15:21 0/0:0:0:0:0:8:0%:14:1E0:33:8:4:4:8 0/0:0:0:0:0:13:0%:25:1E0:36:13:1:12:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:8:0%:14:1E0:32:7:1:6:8 0/0:0:0:0:0:23:0%:44:1E0:34:23:6:17:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:16:0%:29:1E0:38:16:3:13:17 0/0:0:0:0:0:14:0%:25:1E0:34:14:2:12:19 0/0:0:0:0:0:18:0%:32:1E0:35:18:5:13:21 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:9 0/0:0:0:0:0:19:0%:37:1E0:36:19:3:16:21 0/0:0:0:0:0:19:0%:37:1E0:37:19:5:14:20 0/0:0:0:0:0:17:0%:33:1E0:36:17:3:14:24 0/0:0:0:0:0:21:0%:40:1E0:35:21:4:17:24 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:14 0/0:0:0:0:0:9:0%:18:1E0:34:9:2:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:8 0/0:0:0:0:0:19:0%:37:1E0:36:19:2:17:21 0/0:0:0:0:0:24:0%:44:1E0:35:24:3:21:27 0/0:0:0:0:0:11:0%:22:1E0:37:11:2:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:16:0%:29:1E0:35:16:4:12:19 0/0:0:0:0:0:13:0%:25:1E0:36:13:3:10:17 0/0:0:0:0:0:19:0%:37:1E0:35:19:6:13:23 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:13 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:15 0/0:0:0:0:0:14:0%:25:1E0:35:14:1:13:19 0/0:0:0:0:0:17:0%:33:1E0:36:17:2:15:20 0/0:0:0:0:0:19:0%:37:1E0:35:19:3:16:20 0/0:0:0:0:0:16:0%:29:1E0:35:16:6:10:16 0/0:0:0:0:0:22:0%:40:1E0:36:22:4:18:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:14:0%:25:1E0:35:14:3:11:17 0/0:0:0:0:0:11:0%:22:1E0:34:11:2:9:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:34:12:1:11:14 0/0:0:0:0:0:22:0%:40:1E0:35:22:4:18:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:2:17:20 0/0:0:0:0:0:14:0%:25:1E0:35:14:5:9:14 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:18 0/0:0:0:0:0:17:0%:33:1E0:36:17:7:10:17 0/0:0:0:0:0:12:0%:21:1E0:33:12:4:8:14 0/0:0:0:0:0:18:0%:32:1E0:35:18:2:16:21 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:12 0/0:0:0:0:0:10:0%:17:1E0:35:10:1:9:11 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 0/0:0:0:0:0:23:0%:44:1E0:35:23:3:20:26 0/0:0:0:0:0:18:0%:32:1E0:35:18:6:12:20 0/0:0:0:0:0:15:0%:29:1E0:36:15:7:8:17 0/0:0:0:0:0:8:0%:14:1E0:35:8:0:8:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:12:0%:21:1E0:34:12:7:5:14 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:11 0/0:0:0:0:0:12:0%:21:1E0:35:12:2:10:14 0/0:0:0:0:0:14:0%:25:1E0:38:14:1:13:15 0/0:0:0:0:0:16:0%:29:1E0:35:16:2:14:17 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:11 0/0:0:0:0:0:15:0%:29:1E0:35:15:2:13:17 0/0:0:0:0:0:7:0%:14:1E0:38:7:2:5:9 0/0:0:0:0:0:17:0%:33:1E0:36:17:2:15:19 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:13 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:15 0/0:0:0:0:0:18:0%:32:1E0:36:18:0:18:21 0/0:0:0:0:0:18:0%:32:1E0:37:18:5:13:19 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:20:0%:36:1E0:34:20:5:15:24 0/0:0:0:0:0:11:0%:17:1E0:37:10:3:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:11 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:0:0:0:0:20:0%:36:1E0:34:20:3:17:25 0/0:0:0:0:0:17:0%:33:1E0:37:17:8:9:17 0/0:0:0:0:0:27:0%:52:1E0:33:27:10:17:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:13:1:12:13:92.86%:64:3.7391E-7:33:1:0:1:15 0/0:0:0:0:0:14:0%:25:1E0:38:14:5:9:15 0/0:0:0:0:0:12:0%:21:1E0:35:12:1:11:17 0/0:0:0:0:0:10:0%:17:1E0:34:10:2:8:11 0/0:0:0:0:0:18:0%:32:1E0:35:18:4:14:20 0/0:0:0:0:0:18:0%:32:1E0:34:18:7:11:21 0/0:0:0:0:0:10:0%:17:1E0:34:10:2:8:12 0/0:0:0:0:0:7:0%:14:1E0:35:7:2:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:25:0%:48:1E0:36:25:6:19:26 0/0:24:1:1:0:12:8.33%:14:5E-1:35:11:3:8:13 0/0:0:0:0:0:28:0%:51:1E0:35:28:6:22:29 0/0:0:0:0:0:23:0%:44:1E0:34:23:4:19:30 0/0:0:0:0:0:18:0%:32:1E0:35:18:6:12:21 0/0:0:0:0:0:21:0%:40:1E0:35:21:5:16:25 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:15 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:16 0/0:0:0:0:0:9:0%:18:1E0:34:9:1:8:12 0/0:0:0:0:0:19:0%:37:1E0:35:19:7:12:19 0/1:30:9:2:7:9:81.82%:39:1.1057E-4:30:2:2:0:11 0/0:0:0:0:0:14:0%:25:1E0:35:14:4:10:20 0/0:0:0:0:0:12:0%:21:1E0:35:12:3:9:13 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:24 0/0:0:0:0:0:24:0%:44:1E0:36:24:6:18:24 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:15 0/0:0:0:0:0:15:0%:29:1E0:32:15:2:13:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:31:8:1:7:8 0/0:0:0:0:0:11:0%:22:1E0:34:11:1:10:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:13 0/0:0:0:0:0:13:0%:25:1E0:34:13:5:8:16 0/0:0:0:0:0:9:0%:18:1E0:38:9:1:8:9 0/0:0:0:0:0:8:0%:14:1E0:34:8:2:6:8 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:13 0/0:0:0:0:0:7:0%:14:1E0:33:7:2:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:35:9:1:8:10 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:13 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:11 0/0:0:0:0:0:7:0%:14:1E0:34:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:7:0%:14:1E0:34:7:0:7:7 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:16 0/0:0:0:0:0:15:0%:29:1E0:35:15:6:9:16 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:12 0/0:0:0:0:0:14:0%:25:1E0:35:14:4:10:15 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:19 0/0:0:0:0:0:19:0%:37:1E0:35:19:5:14:23 0/0:0:0:0:0:10:0%:17:1E0:34:10:1:9:11 0/0:0:0:0:0:12:0%:21:1E0:35:12:3:9:12 0/0:0:0:0:0:16:0%:29:1E0:36:16:5:11:18 0/0:0:0:0:0:14:0%:25:1E0:34:14:5:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3944282 . G C . PASS AC=250;AF=1.00;AN=250;ANN=C|synonymous_variant|LOW|PE_PGRS56_Rv3512|gene3585|transcript|Transcript_gene3585|Coding|1/1|c.471G>C|p.Gly157Gly|471/1152|471/1152|157/383||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3944282G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3944282G>C||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:33:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:22:2:20:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:18:3:15:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:16:6:10:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:22:4:18:23:100%:99:4.7526E-13:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:11 1/1:38:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:18:2:16:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:43:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:43:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:41:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:34:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:36:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 MTB_anc 3944481 . ACCGGCGGCC A . PASS AC=5;AF=0.027;AN=186;ANN=A|inframe_deletion|MODERATE|PE_PGRS56_Rv3512|gene3585|transcript|Transcript_gene3585|Coding|1/1|c.679_687delCCCGGCGGC|p.Pro227_Gly229del|679/1152|679/1152|227/383||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3944482_3944490delCCGGCGGCC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3944482_3944490delCCGGCGGCC||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:22:0%:40:1E0:35:22:8:14:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:39:7:6:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:12:0%:21:1E0:33:12:5:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:40:11:6:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:11:0%:22:1E0:34:11:5:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:14:0%:25:1E0:32:14:7:7:14 0/0:0:0:0:0:9:0%:18:1E0:34:9:3:6:9 0/0:0:0:0:0:18:0%:32:1E0:36:18:3:15:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:33:9:5:4:10 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:8:0%:14:1E0:34:8:3:5:8 0/0:0:0:0:0:7:0%:14:1E0:34:7:4:3:8 0/0:0:0:0:0:18:0%:32:1E0:35:18:7:11:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:17:0%:33:1E0:35:17:6:11:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:14:0%:25:1E0:35:14:4:10:17 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:10 0/0:0:0:0:0:10:0%:17:1E0:33:10:2:8:13 0/0:0:0:0:0:19:0%:37:1E0:36:19:4:15:22 0/0:0:0:0:0:8:0%:14:1E0:34:8:0:8:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:0:0:0:0:17:0%:33:1E0:34:17:5:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:13 0/0:0:0:0:0:14:0%:25:1E0:34:14:3:11:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:10 0/0:0:0:0:0:13:0%:25:1E0:39:13:8:5:14 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:13 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:12 0/0:0:0:0:0:13:0%:25:1E0:36:13:7:6:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:35:16:2:14:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:60:1:1:0:11:9.09%:14:5E-1:35:10:1:9:11 0/0:0:0:0:0:17:0%:33:1E0:35:17:4:13:18 0/0:0:0:0:0:13:0%:25:1E0:33:13:5:8:13 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 0/0:0:0:0:0:8:0%:14:1E0:40:8:4:4:9 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:0:0:0:0:10:0%:17:1E0:33:10:3:7:11 0/0:0:0:0:0:7:0%:14:1E0:30:7:1:6:9 0/0:0:0:0:0:9:0%:18:1E0:33:9:3:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:8:0%:14:1E0:35:8:3:5:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:11:0%:22:1E0:36:11:6:5:12 0/0:50:1:0:1:9:11.11%:11:5E-1:35:8:6:2:11 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:8:0%:14:1E0:34:8:7:1:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:35:7:1:6:7 0/0:0:0:0:0:12:0%:21:1E0:34:12:3:9:12 0/1:35:7:1:6:8:87.5%:31:6.993E-4:32:1:0:1:8 0/0:0:0:0:0:12:0%:21:1E0:35:12:3:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:34:12:8:4:13 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:11 0/0:0:0:0:0:9:0%:18:1E0:32:9:7:2:9 0/0:0:0:0:0:11:0%:22:1E0:33:11:5:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:14:0%:25:1E0:35:14:9:5:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:11:0%:22:1E0:43:11:5:6:12 0/0:0:0:0:0:20:0%:36:1E0:33:20:5:15:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:5:7:11:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:8:0%:14:1E0:33:8:1:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:33:9:2:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:20:0%:36:1E0:34:20:6:14:24 0/0:0:0:0:0:8:0%:14:1E0:37:8:3:5:8 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:17:0%:33:1E0:33:17:9:8:19 0/0:0:0:0:0:8:0%:14:1E0:34:8:4:4:8 0/0:0:0:0:0:14:0%:25:1E0:33:14:7:7:15 0/0:0:0:0:0:31:0%:59:1E0:36:31:8:23:33 0/0:0:0:0:0:18:0%:32:1E0:35:18:4:14:19 0/0:0:0:0:0:22:0%:40:1E0:34:22:9:13:24 0/0:0:0:0:0:11:0%:22:1E0:36:11:4:7:11 0/0:0:0:0:0:16:0%:29:1E0:32:16:2:14:18 0/0:0:0:0:0:8:0%:14:1E0:34:8:2:6:9 0/0:0:0:0:0:13:0%:25:1E0:35:13:1:12:14 0/0:0:0:0:0:7:0%:14:1E0:34:7:2:5:9 0/0:0:0:0:0:23:0%:44:1E0:33:23:5:18:23 0/0:0:0:0:0:8:0%:14:1E0:34:8:4:4:9 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 0/0:0:0:0:0:29:0%:55:1E0:34:29:9:20:30 0/0:0:0:0:0:18:0%:32:1E0:35:18:4:14:21 0/0:0:0:0:0:11:0%:22:1E0:38:11:1:10:12 0/0:0:0:0:0:7:0%:14:1E0:34:7:4:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:33:9:1:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:34:7:2:5:7 0/0:0:0:0:0:9:0%:18:1E0:34:9:2:7:9 0/0:0:0:0:0:11:0%:22:1E0:35:11:3:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:13:0%:25:1E0:35:13:7:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:34:9:3:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:7:0%:14:1E0:38:7:3:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:10:0%:17:1E0:35:10:3:7:11 0/0:0:0:0:0:13:0%:25:1E0:34:13:5:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:15:0%:29:1E0:34:15:7:8:15 0/0:0:0:0:0:12:0%:21:1E0:36:12:4:8:12 0/0:0:0:0:0:14:0%:25:1E0:37:14:7:7:15 0/0:0:0:0:0:9:0%:18:1E0:36:9:6:3:9 0/0:0:0:0:0:7:0%:14:1E0:34:7:5:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3944490 . C A . PASS AC=184;AF=1.00;AN=184;ANN=A|missense_variant|MODERATE|PE_PGRS56_Rv3512|gene3585|transcript|Transcript_gene3585|Coding|1/1|c.679C>A|p.Pro227Thr|679/1152|679/1152|227/383||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3944490C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3944490C>A||||||;HET=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:12:6:6:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:33:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:32:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:32:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:34:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:31:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:12:6:6:13:100%:64:3.698E-7:0:0:0:0:14 1/1:34:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:33:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:33:11:3:8:12:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:32:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:9:8:1:10:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:34:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:15:9:6:16:93.75%:75:2.8282E-8:32:1:1:0:17 1/1:37:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:32:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:17:9:8:18:94.44%:93:4.2852E-10:0:0:0:0:21 1/1:33:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:34:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:33:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:16:2:14:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:33:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:32:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:34:19:3:16:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:32:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:30:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:33:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3944514 . A G . PASS AC=194;AF=1.00;AN=194;ANN=G|missense_variant|MODERATE|PE_PGRS56_Rv3512|gene3585|transcript|Transcript_gene3585|Coding|1/1|c.703A>G|p.Asn235Asp|703/1152|703/1152|235/383||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3944514A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3944514A>G||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:10 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:8:5:3:8:100%:41:7.77E-5:0:0:0:0:10 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:34:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:33:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:17:2:15:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:11:2:9:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:32:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:35:21:3:18:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:42:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3946250 . C G . PASS AC=136;AF=0.567;AN=240;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.457C>G|p.Pro153Ala|457/4470|457/4470|153/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3946250C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3946250C>G||||||;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:33:6:0:6:17:35.29%:20:9.2021E-3:30:11:0:11:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:6:0:6:10:60%:22:5.418E-3:36:4:0:4:12 0/1:32:6:1:5:9:66.67%:23:4.5249E-3:30:3:0:3:9 0/1:36:6:0:6:13:46.15%:21:7.4534E-3:34:7:0:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:7:0:7:10:70%:28:1.548E-3:32:3:0:3:10 0/0:36:4:0:4:17:23.53%:11:5.132E-2:33:13:1:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:7:0:7:10:70%:28:1.548E-3:30:3:0:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:10:0:10:15:66.67%:40:9.995E-5:32:5:1:4:16 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:16 0/1:35:10:0:10:16:62.5%:39:1.2413E-4:34:6:1:5:19 0/0:37:3:1:2:10:30%:4:1.0526E-1:37:7:0:7:12 0/1:36:9:0:9:15:60%:34:3.4983E-4:35:6:0:6:18 0/1:36:10:0:10:18:55.56%:37:1.7215E-4:34:8:0:8:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:34:7:0:7:9 0/1:37:7:0:7:14:50%:25:2.8986E-3:29:7:0:7:14 1/1:34:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:15 0/0:36:4:0:4:13:30.77%:6:4.7826E-2:33:9:0:9:14 1/1:34:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 0/1:37:7:0:7:15:46.67%:25:3.1609E-3:36:8:1:7:16 0/0:34:4:0:4:15:26.67%:8:4.9808E-2:34:11:1:10:17 0/1:36:8:0:8:19:42.11%:28:1.5455E-3:38:11:0:11:21 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 0/1:35:6:0:6:16:37.5%:20:8.837E-3:32:10:2:8:17 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:37:8:0:8:14:57.14%:30:9.6618E-4:31:6:0:6:14 0/1:35:6:0:6:11:54.55%:22:6.192E-3:33:5:0:5:12 0/0:35:3:0:3:13:23.08%:9:1.1E-1:33:10:0:10:14 0/1:36:15:0:15:21:71.43%:62:5.4994E-7:33:6:0:6:23 0/0:31:4:0:4:10:40%:3:4.3344E-2:32:6:0:6:10 1/1:35:12:0:12:13:100%:64:3.698E-7:0:0:0:0:15 0/1:34:7:0:7:13:53.85%:25:2.6087E-3:34:6:0:6:13 0/1:36:7:0:7:17:41.18%:24:3.6151E-3:33:10:0:10:18 0/1:36:7:0:7:15:46.67%:25:3.1609E-3:33:8:0:8:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:5:0:5:13:38.46%:4:1.9565E-2:34:8:1:7:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:33:5:0:5:14:35.71%:4:2.037E-2:33:9:1:8:14 0/0:36:4:0:4:17:23.53%:11:5.132E-2:33:13:0:13:20 0/1:35:9:0:9:12:75%:37:1.6826E-4:30:3:0:3:12 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:37:7:0:7:14:50%:25:2.6087E-3:37:6:1:5:14 0/1:36:8:0:8:16:50%:29:1.2236E-3:34:8:0:8:16 0/1:35:6:0:6:11:54.55%:22:6.192E-3:32:5:0:5:12 0/1:36:8:0:8:17:47.06%:28:1.3389E-3:31:9:0:9:17 0/1:35:7:0:7:15:46.67%:25:3.1609E-3:35:8:1:7:16 0/1:36:9:0:9:15:60%:34:3.4983E-4:35:6:0:6:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:37:3:0:3:12:25%:6:1.087E-1:33:9:0:9:12 0/1:35:6:0:6:12:50%:21:6.865E-3:34:6:0:6:12 0/1:34:9:1:8:17:52.94%:33:4.6348E-4:34:8:1:7:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:6:0:6:12:50%:21:6.865E-3:33:6:0:6:13 0/0:37:2:0:2:8:25%:5:2.3333E-1:36:6:1:5:9 0/0:31:4:0:4:11:36.36%:4:4.5113E-2:35:7:1:6:11 0/1:37:7:1:6:18:38.89%:24:3.8123E-3:33:11:1:10:18 1/1:36:21:1:20:21:100%:99:1.8578E-12:0:0:0:0:21 0/1:36:7:0:7:9:77.78%:29:1.1312E-3:31:2:0:2:9 0/1:35:10:0:10:16:62.5%:39:1.2413E-4:34:6:1:5:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:35:8:0:8:15:53.33%:29:1.0995E-3:35:7:0:7:16 0/1:36:9:0:9:18:50%:32:5.1645E-4:33:9:0:9:20 0/0:33:5:0:5:12:41.67%:3:1.8634E-2:34:7:0:7:12 1/1:36:15:0:15:16:93.75%:81:6.4467E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:34:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:35:11:0:11:24:45.83%:39:1.1047E-4:34:13:1:12:25 0/1:36:6:0:6:11:54.55%:22:6.192E-3:32:5:1:4:11 0/1:37:8:1:7:26:30.77%:26:2.076E-3:34:18:1:17:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:36:6:0:6:15:40%:20:8.4291E-3:32:9:1:8:17 0/1:37:8:0:8:19:42.11%:28:1.5455E-3:33:11:0:11:19 0/1:35:9:0:9:18:50%:32:5.1645E-4:33:9:1:8:19 0/1:37:7:0:7:18:38.89%:24:3.8123E-3:33:11:0:11:19 0/1:36:6:0:6:16:37.5%:20:8.837E-3:36:10:1:9:17 0/1:36:14:1:13:25:56%:53:4.7528E-6:34:11:0:11:29 0/1:37:9:0:9:14:64.29%:35:2.8986E-4:33:5:1:4:15 0/1:36:9:0:9:11:81.82%:39:1.1057E-4:29:2:0:2:12 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:36:10:0:10:18:55.56%:37:1.7215E-4:33:8:1:7:21 0/1:35:13:0:13:19:68.42%:53:5.0106E-6:31:6:0:6:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:37:11:0:11:21:52.38%:40:8.2399E-5:30:10:0:10:21 0/1:35:8:0:8:26:30.77%:26:2.076E-3:34:18:0:18:28 0/1:35:7:0:7:10:70%:28:1.548E-3:36:3:0:3:11 0/1:36:10:0:10:16:62.5%:39:1.2413E-4:32:6:0:6:17 1/1:35:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:18 0/1:37:9:0:9:22:40.91%:31:7.0165E-4:32:13:0:13:25 1/1:36:24:0:24:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:15 0/1:33:8:0:8:11:72.73%:32:5.16E-4:32:3:0:3:14 0/1:36:14:0:14:24:58.33%:53:4.0663E-6:29:10:0:10:27 0/1:36:10:0:10:16:62.5%:39:1.2413E-4:32:6:0:6:16 0/1:37:8:1:7:17:47.06%:28:1.3389E-3:33:9:1:8:17 0/1:36:14:1:13:28:50%:51:6.911E-6:33:14:0:14:29 0/1:34:9:0:9:14:64.29%:35:2.8986E-4:35:5:1:4:14 0/1:36:11:0:11:16:68.75%:44:3.3854E-5:32:5:0:5:17 0/1:34:10:0:10:15:66.67%:40:9.995E-5:30:5:0:5:16 1/1:34:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:36:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:16 0/1:34:11:0:11:16:68.75%:44:3.3854E-5:32:5:0:5:16 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:35:9:0:9:11:81.82%:39:1.1057E-4:34:2:0:2:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:16 0/1:36:9:0:9:12:75%:37:1.6826E-4:33:3:0:3:12 0/1:35:6:0:6:7:85.71%:26:2.331E-3:30:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:36:4:0:4:14:28.57%:6:4.8889E-2:33:10:0:10:16 0/0:0:0:0:0:9:0%:18:1E0:32:9:0:9:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:8:0:8:12:66.67%:31:6.7304E-4:29:4:0:4:12 0/0:38:2:0:2:8:25%:5:2.3333E-1:35:6:1:5:9 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:16 0/1:37:8:0:8:12:66.67%:31:6.7304E-4:36:4:1:3:14 0/1:36:8:0:8:21:38.1%:27:1.7241E-3:31:13:0:13:21 0/1:36:13:0:13:15:86.67%:60:8.7675E-7:30:2:0:2:15 0/1:37:6:0:6:10:60%:22:5.418E-3:37:4:0:4:10 MTB_anc 3946408 . T C . PASS AC=20;AF=1.00;AN=20;ANN=C|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.615T>C|p.Gly205Gly|615/4470|615/4470|205/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3946408T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3946408T>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. MTB_anc 3947413 . T C . PASS AC=13;AF=0.141;AN=92;ANN=C|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.1620T>C|p.Gly540Gly|1620/4470|1620/4470|540/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3947413T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3947413T>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:32:1:0:1:9:11.11%:11:5E-1:37:8:0:8:9 0/0:38:2:0:2:8:25%:5:2.3333E-1:38:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:38:4:0:4:10:40%:3:4.3344E-2:36:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:5:0:5:16:31.25%:6:2.1691E-2:38:11:0:11:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:1:0:1:8:12.5%:8:5E-1:38:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:5:1:4:17:29.41%:8:2.2239E-2:37:12:0:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/0:36:4:0:4:13:30.77%:6:4.7826E-2:36:9:5:4:13 0/0:35:4:0:4:11:36.36%:4:4.5113E-2:38:7:1:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:4:0:4:12:33.33%:4:4.6584E-2:37:8:0:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/1:37:6:1:5:18:33.33%:20:9.5308E-3:37:12:1:11:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:3:0:3:9:33.33%:4:1.0294E-1:37:6:0:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:5:2:3:14:35.71%:4:2.037E-2:37:9:0:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:37:6:0:6:10:60%:22:5.418E-3:36:4:0:4:11 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:1:2:13:23.08%:9:1.1E-1:37:10:0:10:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:0:3:11:27.27%:7:1.0714E-1:37:8:2:6:11 0/0:38:2:0:2:8:25%:5:2.3333E-1:36:6:0:6:8 0/1:37:6:0:6:11:54.55%:22:6.192E-3:38:5:0:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:3:3:8:75%:24:3.4965E-3:38:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:39:2:0:2:14:15.38%:13:2.4E-1:36:11:0:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:3:0:3:9:33.33%:4:1.0294E-1:38:6:1:5:9 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:38:6:0:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:5:0:5:13:38.46%:4:1.9565E-2:37:8:1:7:13 0/0:37:4:1:3:11:36.36%:4:4.5113E-2:37:7:1:6:11 0/0:37:4:0:4:11:36.36%:4:4.5113E-2:37:7:0:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:7:1:6:21:33.33%:23:4.3101E-3:36:14:0:14:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:0:1:11:9.09%:14:5E-1:37:10:0:10:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:38:6:0:6:7:85.71%:26:2.331E-3:37:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:1:0:1:7:14.29%:8:5E-1:38:6:0:6:7 0/0:37:3:0:3:19:15.79%:17:1.1486E-1:37:16:1:15:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:0:3:13:23.08%:9:1.1E-1:37:10:1:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:4:1:3:18:22.22%:10:5.1948E-2:36:14:1:13:19 0/1:37:10:0:10:18:55.56%:37:1.7215E-4:35:8:0:8:18 0/1:37:6:0:6:11:54.55%:22:6.192E-3:38:5:0:5:12 0/1:37:10:0:10:22:45.45%:35:2.6061E-4:37:12:1:11:22 0/0:34:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/1:36:7:1:6:12:58.33%:26:2.2883E-3:37:5:0:5:13 0/0:37:3:0:3:10:30%:4:1.0526E-1:37:7:0:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:0:6:12:50%:21:6.865E-3:36:6:0:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:2:0:2:12:16.67%:10:2.3913E-1:37:10:1:9:12 0/1:37:7:1:6:22:35%:23:4.158E-3:37:13:2:11:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:38:3:0:3:10:30%:4:1.0526E-1:37:7:2:5:10 0/1:37:7:0:7:12:63.64%:27:1.935E-3:36:4:1:3:12 0/0:37:5:0:5:15:33.33%:6:2.1073E-2:37:10:1:9:15 0/0:39:1:0:1:9:11.11%:11:5E-1:37:8:1:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3947415 . G A . PASS AC=11;AF=0.122;AN=90;ANN=A|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.1622G>A|p.Ser541Asn|1622/4470|1622/4470|541/1489||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3947415G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3947415G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:1:0:1:9:11.11%:11:5E-1:35:8:0:8:9 0/0:37:2:0:2:8:25%:5:2.3333E-1:37:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:4:0:4:10:40%:3:4.3344E-2:36:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:5:0:5:16:31.25%:6:2.1691E-2:36:11:0:11:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:1:0:1:8:12.5%:8:5E-1:37:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:4:0:4:16:25%:8:5.0612E-2:37:12:0:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:30:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/0:36:4:0:4:12:33.33%:4:4.6584E-2:37:8:4:4:13 0/0:36:2:0:2:9:22.22%:7:2.3529E-1:37:7:1:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:33:4:0:4:12:33.33%:4:4.6584E-2:36:8:0:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/1:34:6:1:5:18:33.33%:20:9.5308E-3:36:12:1:11:18 0/0:37:1:0:1:7:14.29%:8:5E-1:36:6:2:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:32:5:2:3:14:35.71%:4:2.037E-2:35:9:0:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:1:2:14:21.43%:9:1.1111E-1:37:11:0:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:3:0:3:10:30%:4:1.0526E-1:37:7:1:6:11 0/0:32:2:0:2:8:25%:5:2.3333E-1:35:6:0:6:8 0/1:35:6:0:6:11:54.55%:22:6.192E-3:35:5:0:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:35:6:3:3:8:75%:24:3.4965E-3:37:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:2:0:2:14:14.29%:12:2.4074E-1:36:12:0:12:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:3:0:3:9:33.33%:4:1.0294E-1:37:6:1:5:9 0/0:35:3:0:3:9:33.33%:4:1.0294E-1:37:6:0:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:5:0:5:12:41.67%:3:1.8634E-2:35:7:1:6:13 0/0:37:4:1:3:11:36.36%:4:4.5113E-2:36:7:1:6:11 0/0:37:4:0:4:11:36.36%:4:4.5113E-2:35:7:0:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:7:1:6:21:33.33%:23:4.3101E-3:36:14:0:14:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:0:1:11:9.09%:14:5E-1:36:10:0:10:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:0:6:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:1:0:1:7:14.29%:8:5E-1:36:6:0:6:7 0/0:34:3:0:3:20:15%:16:1.1538E-1:36:17:1:16:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:3:0:3:12:25%:6:1.087E-1:37:9:1:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:4:1:3:19:21.05%:13:5.251E-2:37:15:1:14:19 0/1:36:9:0:9:17:52.94%:33:4.6348E-4:36:8:0:8:17 0/1:35:7:0:7:12:58.33%:26:2.2883E-3:36:5:0:5:12 0/1:35:10:0:10:22:45.45%:35:2.6061E-4:36:12:1:11:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:6:1:5:12:50%:21:6.865E-3:37:6:0:6:13 0/0:37:3:0:3:10:30%:4:1.0526E-1:35:7:0:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:5:0:5:11:45.45%:3:1.7544E-2:36:6:0:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:2:0:2:12:16.67%:10:2.3913E-1:37:10:1:9:12 0/1:36:7:1:6:21:33.33%:23:4.3101E-3:37:14:2:12:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:4:0:4:10:40%:3:4.3344E-2:36:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:37:3:0:3:10:30%:4:1.0526E-1:36:7:2:5:10 0/1:36:7:0:7:12:58.33%:26:2.2883E-3:36:5:1:4:12 0/0:36:5:0:5:15:33.33%:6:2.1073E-2:36:10:1:9:15 0/0:38:1:0:1:9:11.11%:11:5E-1:36:8:1:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3947418 . G C . PASS AC=12;AF=0.133;AN=90;ANN=C|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.1625G>C|p.Ser542Thr|1625/4470|1625/4470|542/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3947418G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3947418G>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:28:1:0:1:9:11.11%:11:5E-1:36:8:0:8:9 0/0:35:2:0:2:8:25%:5:2.3333E-1:37:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:4:0:4:10:40%:3:4.3344E-2:37:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:0:4:15:26.67%:8:4.9808E-2:37:11:0:11:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:1:0:1:8:12.5%:8:5E-1:37:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:5:1:4:16:31.25%:6:2.1691E-2:36:11:0:11:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/0:37:4:0:4:14:28.57%:6:4.8889E-2:37:10:5:5:14 0/0:37:3:0:3:10:30%:4:1.0526E-1:35:7:1:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:35:4:0:4:12:33.33%:4:4.6584E-2:37:8:0:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:0:2:8:25%:5:2.3333E-1:36:6:0:6:8 0/1:35:6:1:5:18:33.33%:20:9.5308E-3:36:12:1:11:18 0/0:37:1:0:1:7:14.29%:8:5E-1:35:6:2:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:5:2:3:14:35.71%:4:2.037E-2:35:9:0:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:3:1:2:14:21.43%:9:1.1111E-1:36:11:0:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:3:0:3:11:27.27%:7:1.0714E-1:37:8:2:6:11 0/0:34:2:0:2:8:25%:5:2.3333E-1:35:6:0:6:8 0/1:36:6:0:6:11:54.55%:22:6.192E-3:36:5:0:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:35:6:3:3:8:75%:24:3.4965E-3:37:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:2:0:2:13:15.38%:10:2.3913E-1:36:10:0:10:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:2:0:2:8:25%:5:2.3333E-1:37:6:1:5:9 0/0:36:4:0:4:10:40%:3:4.3344E-2:37:6:0:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:33:5:0:5:13:38.46%:4:1.9565E-2:35:8:1:7:13 0/0:37:4:1:3:11:36.36%:4:4.5113E-2:37:7:1:6:11 0/0:37:4:0:4:11:36.36%:4:4.5113E-2:37:7:0:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:7:1:6:21:33.33%:23:4.3101E-3:36:14:0:14:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:0:1:12:8.33%:14:5E-1:35:11:0:11:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:0:6:7:85.71%:26:2.331E-3:34:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:1:0:1:7:14.29%:8:5E-1:35:6:0:6:7 0/0:34:2:0:2:19:10.53%:21:2.4324E-1:36:17:1:16:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:0:3:13:23.08%:9:1.1E-1:37:10:1:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:4:1:3:19:21.05%:13:5.251E-2:35:15:1:14:19 0/1:36:9:0:9:17:52.94%:33:4.6348E-4:37:8:0:8:17 0/1:37:7:0:7:12:58.33%:26:2.2883E-3:37:5:0:5:12 0/1:35:10:0:10:22:45.45%:35:2.6061E-4:36:12:1:11:23 0/0:33:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/1:36:6:1:5:12:50%:21:6.865E-3:35:6:0:6:13 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:36:7:0:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:0:6:12:50%:21:6.865E-3:37:6:0:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:2:0:2:12:16.67%:10:2.3913E-1:36:10:1:9:12 0/1:36:7:1:6:22:31.82%:23:4.158E-3:36:13:2:11:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:38:2:0:2:9:22.22%:7:2.3529E-1:36:7:2:5:11 0/1:37:7:0:7:12:58.33%:27:1.935E-3:37:4:1:3:12 0/0:37:5:0:5:15:33.33%:6:2.1073E-2:35:10:1:9:15 0/0:38:1:0:1:8:12.5%:8:5E-1:36:7:0:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3947422 . T G . PASS AC=13;AF=0.148;AN=88;ANN=G|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.1629T>G|p.Gly543Gly|1629/4470|1629/4470|543/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3947422T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3947422T>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:1:0:1:8:12.5%:8:5E-1:35:7:0:7:8 0/0:37:2:0:2:8:25%:5:2.3333E-1:37:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:35:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:5:0:5:15:33.33%:6:2.1073E-2:35:10:0:10:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:32:1:0:1:8:12.5%:8:5E-1:35:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:5:1:4:16:31.25%:6:2.1073E-2:35:10:0:10:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:2:0:2:8:25%:5:2.3333E-1:36:6:0:6:8 0/0:36:4:0:4:14:28.57%:6:4.7826E-2:36:9:5:4:14 0/0:36:3:0:3:10:30%:4:1.0526E-1:34:7:1:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:37:4:0:4:12:33.33%:4:4.5113E-2:37:7:0:7:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:0:2:8:25%:5:2.3333E-1:35:6:0:6:8 0/1:36:6:1:5:18:33.33%:20:9.5308E-3:37:12:1:11:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:5:2:3:12:41.67%:3:1.8634E-2:37:7:0:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:36:6:0:6:10:60%:22:5.418E-3:36:4:0:4:11 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:3:1:2:12:25%:6:1.087E-1:36:9:0:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:3:0:3:10:30%:4:1.0526E-1:37:7:1:6:11 0/0:37:2:0:2:8:25%:5:2.3333E-1:34:6:0:6:8 0/1:35:6:0:6:11:54.55%:22:6.192E-3:37:5:0:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:3:3:8:75%:24:3.4965E-3:35:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:2:0:2:12:16.67%:10:2.381E-1:35:9:0:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:0:3:9:33.33%:4:1.0294E-1:37:6:1:5:9 0/0:38:4:0:4:10:40%:3:4.3344E-2:37:6:0:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:36:5:0:5:13:38.46%:4:1.9565E-2:36:8:1:7:13 0/0:35:4:1:3:11:36.36%:4:4.5113E-2:36:7:1:6:11 0/0:37:4:0:4:11:36.36%:3:4.3344E-2:35:6:0:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:36:7:1:6:20:35%:23:3.9926E-3:34:12:0:12:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:0:1:12:8.33%:11:5E-1:35:9:0:9:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:0:6:7:85.71%:26:2.331E-3:36:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:1:0:1:7:14.29%:8:5E-1:35:6:0:6:7 0/0:35:3:0:3:17:17.65%:14:1.1364E-1:35:14:0:14:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:3:0:3:13:21.43%:9:1.1E-1:36:10:1:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:4:1:3:18:22.22%:11:5.132E-2:34:13:1:12:19 0/1:37:9:0:9:17:52.94%:33:4.6348E-4:37:8:0:8:17 0/1:36:6:0:6:11:54.55%:22:6.192E-3:37:5:0:5:13 0/1:36:10:0:10:21:47.62%:36:2.3971E-4:37:11:1:10:23 0/0:37:2:0:2:8:25%:5:2.3333E-1:36:6:0:6:8 0/1:37:7:1:6:13:53.85%:25:2.6087E-3:37:6:0:6:13 0/0:35:3:0:3:10:30%:4:1.0526E-1:35:7:0:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:6:0:6:12:50%:21:6.865E-3:36:6:0:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:2:0:2:12:16.67%:10:2.381E-1:36:9:1:8:12 0/1:37:7:1:6:22:31.82%:23:3.9926E-3:37:12:2:10:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:37:7:0:7:12:58.33%:27:1.935E-3:33:4:1:3:12 0/0:36:5:0:5:14:35.71%:4:2.037E-2:37:9:1:8:15 0/0:36:1:0:1:8:12.5%:8:5E-1:37:7:0:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3947424 . C T . PASS AC=13;AF=0.141;AN=92;ANN=T|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.1631C>T|p.Ala544Val|1631/4470|1631/4470|544/1489||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3947424C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3947424C>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:1:0:1:8:12.5%:8:5E-1:36:7:0:7:8 0/0:33:2:0:2:8:25%:5:2.3333E-1:37:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:35:4:0:4:10:40%:3:4.3344E-2:34:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:5:0:5:16:31.25%:6:2.1691E-2:36:11:0:11:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:1:0:1:8:12.5%:8:5E-1:37:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:5:1:4:17:29.41%:8:2.2239E-2:35:12:0:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:32:1:0:1:7:14.29%:8:5E-1:36:6:0:6:8 0/0:37:4:0:4:15:26.67%:8:4.9808E-2:36:11:5:6:15 0/0:37:3:0:3:10:30%:4:1.0526E-1:35:7:1:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:3:0:3:11:27.27%:7:1.0714E-1:37:8:0:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/1:35:6:1:5:18:33.33%:20:9.5308E-3:36:12:1:11:18 0/0:37:1:0:1:7:14.29%:8:5E-1:36:6:2:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:3:0:3:10:30%:4:1.0526E-1:35:7:0:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:4:2:2:12:33.33%:4:4.6584E-2:36:8:0:8:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:6:0:6:11:54.55%:22:6.192E-3:37:5:0:5:12 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:37:3:1:2:12:25%:6:1.087E-1:36:9:0:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:3:0:3:10:30%:4:1.0526E-1:37:7:1:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:6:0:6:11:54.55%:22:6.192E-3:37:5:0:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:37:6:3:3:8:75%:24:3.4965E-3:37:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:2:0:2:13:15.38%:13:2.4E-1:36:11:0:11:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:3:0:3:9:33.33%:4:1.0294E-1:37:6:1:5:9 0/0:36:4:0:4:10:40%:3:4.3344E-2:37:6:0:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:4:0:4:13:30.77%:6:4.7826E-2:35:9:2:7:14 0/0:37:3:1:2:9:33.33%:4:1.0294E-1:36:6:1:5:11 0/0:36:4:0:4:11:36.36%:4:4.5113E-2:35:7:0:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:35:7:1:6:22:31.82%:23:4.4505E-3:34:15:2:13:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:0:1:13:7.69%:18:5E-1:36:12:0:12:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:0:6:8:75%:24:3.4965E-3:32:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:3:0:3:18:16.67%:14:1.1429E-1:35:15:1:14:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:1:2:9:33.33%:4:1.0294E-1:36:6:0:6:9 0/0:37:3:0:3:13:23.08%:9:1.1E-1:36:10:1:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:4:1:3:19:21.05%:13:5.251E-2:35:15:1:14:19 0/1:36:9:0:9:17:52.94%:33:4.6348E-4:36:8:0:8:18 0/1:36:6:0:6:13:46.15%:21:7.4534E-3:34:7:1:6:14 0/1:36:9:0:9:23:39.13%:31:7.4174E-4:35:14:2:12:25 0/0:31:2:0:2:9:22.22%:7:2.3529E-1:34:7:0:7:9 0/1:36:7:1:6:13:53.85%:25:2.6087E-3:37:6:0:6:13 0/0:37:3:0:3:10:30%:4:1.0526E-1:36:7:0:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:6:0:6:12:50%:21:6.865E-3:35:6:0:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:2:0:2:12:16.67%:10:2.3913E-1:37:10:1:9:12 0/1:37:7:1:6:21:33.33%:23:4.3101E-3:37:14:2:12:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:35:3:0:3:9:33.33%:4:1.0294E-1:35:6:2:4:12 0/1:36:7:0:7:13:53.85%:25:2.6087E-3:34:6:1:5:13 0/0:37:5:0:5:15:33.33%:6:2.1073E-2:36:10:1:9:15 0/0:37:1:0:1:8:12.5%:8:5E-1:36:7:1:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3947425 . C T . PASS AC=10;AF=0.114;AN=88;ANN=T|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.1632C>T|p.Ala544Ala|1632/4470|1632/4470|544/1489||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3947425C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3947425C>T||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:32:1:0:1:8:12.5%:8:5E-1:35:7:0:7:8 0/0:31:2:0:2:8:25%:5:2.3333E-1:37:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:36:4:0:4:10:40%:3:4.3344E-2:36:6:1:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:5:0:5:15:33.33%:6:2.1073E-2:36:10:0:10:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:28:1:0:1:8:12.5%:8:5E-1:35:7:1:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:34:5:1:4:17:29.41%:8:2.2239E-2:36:12:0:12:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:33:2:0:2:8:25%:5:2.3333E-1:36:6:0:6:8 0/0:37:4:0:4:15:26.67%:8:4.9808E-2:37:11:5:6:15 0/0:35:3:0:3:10:30%:4:1.0526E-1:36:7:1:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:37:4:0:4:12:33.33%:4:4.6584E-2:37:8:0:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:2:0:2:8:25%:5:2.3333E-1:37:6:0:6:8 0/0:35:5:1:4:17:29.41%:8:2.2239E-2:36:12:1:11:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:33:3:0:3:10:30%:4:1.0526E-1:36:7:0:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:35:5:2:3:12:41.67%:3:1.8634E-2:36:7:0:7:13 0/0:36:3:0:3:10:30%:4:1.0526E-1:35:7:0:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:6:0:6:12:50%:21:6.865E-3:36:6:0:6:12 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:4:1:3:14:28.57%:6:4.8889E-2:37:10:0:10:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:36:3:0:3:11:27.27%:7:1.0714E-1:35:8:2:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:6:0:6:12:50%:21:6.865E-3:36:6:1:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:2:0:2:13:15.38%:13:2.4E-1:34:11:0:11:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:34:3:0:3:9:33.33%:4:1.0294E-1:37:6:1:5:9 0/0:38:4:0:4:10:40%:3:4.3344E-2:37:6:0:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:5:0:5:14:35.71%:4:2.037E-2:35:9:2:7:14 0/0:36:4:1:3:11:36.36%:4:4.5113E-2:36:7:1:6:11 0/0:36:4:0:4:11:36.36%:4:4.5113E-2:36:7:0:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:6:1:5:21:28.57%:9:1.0344E-2:34:15:2:13:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:1:0:1:13:7.69%:18:5E-1:36:12:0:12:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:6:0:6:8:75%:24:3.4965E-3:31:2:0:2:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:3:0:3:19:15.79%:17:1.1486E-1:36:16:1:15:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:37:3:1:2:9:33.33%:4:1.0294E-1:32:6:0:6:9 0/0:36:3:0:3:14:21.43%:9:1.1111E-1:36:11:1:10:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:37:4:1:3:19:21.05%:13:5.251E-2:36:15:1:14:19 0/1:36:8:0:8:16:50%:29:1.2236E-3:37:8:0:8:18 0/1:36:7:0:7:14:50%:25:2.8986E-3:36:7:1:6:14 0/1:36:10:0:10:22:45.45%:35:2.6061E-4:34:12:2:10:25 0/0:37:2:0:2:9:22.22%:7:2.3529E-1:35:7:0:7:9 0/1:38:6:1:5:10:60%:22:5.418E-3:37:4:0:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:6:0:6:12:50%:21:6.865E-3:36:6:0:6:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:2:0:2:12:16.67%:10:2.3913E-1:37:10:1:9:12 0/1:37:7:1:6:21:33.33%:23:4.3101E-3:37:14:2:12:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:38:3:0:3:10:30%:4:1.0526E-1:36:7:2:5:12 0/1:36:7:0:7:13:53.85%:25:2.6087E-3:34:6:1:5:13 0/0:37:5:0:5:14:35.71%:4:2.037E-2:36:9:1:8:15 0/0:38:1:0:1:9:11.11%:11:5E-1:36:8:1:7:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3947476 . G C . PASS AC=91;AF=0.989;AN=92;ANN=C|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.1683G>C|p.Gly561Gly|1683/4470|1683/4470|561/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3947476G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3947476G>C||||||;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:52:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:37:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:6:2:4:7:85.71%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:0:9:10:90%:42:5.9538E-5:32:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:16:1:15:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:43:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:41:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:17:0:17:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:41:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:40:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3947478 . G C . PASS AC=80;AF=1.00;AN=80;ANN=C|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.1685G>C|p.Gly562Ala|1685/4470|1685/4470|562/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3947478G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3947478G>C||||||;HET=0;WT=0;set-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:39:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:41:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:0:9:10:90%:42:5.9538E-5:37:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:40:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:43:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:15:0:15:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:16:0:16:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:40:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:43:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3947506 . T C . PASS AC=2;AF=0.071;AN=28;ANN=C|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.1713T>C|p.Asp571Asp|1713/4470|1713/4470|571/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3947506T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3947506T>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:7:2:5:8:87.5%:31:6.993E-4:39:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:35:5:1:4:11:45.45%:3:1.7544E-2:35:6:1:5:12 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:2:0:2:8:25%:5:2.3333E-1:36:6:0:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:37:3:1:2:9:33.33%:4:1.0294E-1:35:6:0:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:1:0:1:7:14.29%:8:5E-1:37:6:0:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:3:0:3:9:33.33%:4:1.0294E-1:37:6:0:6:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 0/1:36:6:0:6:14:42.86%:20:7.971E-3:36:8:0:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:38:1:0:1:11:9.09%:14:5E-1:37:10:0:10:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:2:0:2:10:20%:7:2.3684E-1:36:8:0:8:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:33:5:0:5:13:38.46%:4:1.9565E-2:37:8:1:7:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:35:2:0:2:10:20%:7:2.3684E-1:37:8:1:7:10 0/0:34:4:0:4:11:36.36%:4:4.5113E-2:35:7:2:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. 0/0:38:1:0:1:7:14.29%:8:5E-1:35:6:1:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:34:1:0:1:7:14.29%:8:5E-1:35:6:1:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 MTB_anc 3948054 . A G . PASS AC=9;AF=0.900;AN=10;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2261A>G|p.Asp754Gly|2261/4470|2261/4470|754/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948054A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948054A>G||||||;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:37:7:6:1:8:87.5%:31:6.993E-4:34:1:1:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. MTB_anc 3948328 . A AGCCGGCGGG . PASS AC=2;AF=0.500;AN=4;ANN=AGCCGGCGGG|inframe_insertion|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2545_2553dupGCCGGCGGG|p.Ala849_Gly851dup|2554/4470|2554/4470|852/1489||INFO_REALIGN_3_PRIME,AGCCGGCGGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948328_3948329insGCCGGCGGG||||||,AGCCGGCGGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948328_3948329insGCCGGCGGG||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 0/1:34:6:0:6:8:75%:24:3.4965E-3:35:2:1:1:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:26:7:1:6:8:70%:28:1.548E-3:37:3:3:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. MTB_anc 3948347 . T G . PASS AC=8;AF=1.00;AN=8;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2554T>G|p.Ser852Ala|2554/4470|2554/4470|852/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948347T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948347T>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. MTB_anc 3948362 . T G . PASS AC=2;AF=1.00;AN=2;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2569T>G|p.Cys857Gly|2569/4470|2569/4470|857/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948362T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948362T>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. MTB_anc 3948404 . T G . PASS AC=30;AF=1.00;AN=30;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2611T>G|p.Cys871Gly|2611/4470|2611/4470|871/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948404T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948404T>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 ./. ./. ./. ./. 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 3948414 . T G . PASS AC=30;AF=1.00;AN=30;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2621T>G|p.Val874Gly|2621/4470|2621/4470|874/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948414T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948414T>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./. ./. ./. ./. 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 3948418 . A C . PASS AC=30;AF=1.00;AN=30;ANN=C|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2625A>C|p.Gly875Gly|2625/4470|2625/4470|875/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948418A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948418A>C||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./. ./. ./. ./. 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 3948419 . A G . PASS AC=30;AF=1.00;AN=30;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2626A>G|p.Thr876Ala|2626/4470|2626/4470|876/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948419A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948419A>G||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 ./. ./. ./. ./. 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 MTB_anc 3948567 . C G . PASS AC=1;AF=4.132e-03;AN=242;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2774C>G|p.Thr925Ser|2774/4470|2774/4470|925/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948567C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948567C>G||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:24:0%:44:1E0:36:24:16:8:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:13:0%:25:1E0:35:13:10:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:38:9:7:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:44:12:7:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:16:0%:29:1E0:39:15:12:3:16 0/0:0:0:0:0:17:0%:29:1E0:43:16:10:6:17 0/0:0:0:0:0:11:0%:22:1E0:42:11:6:5:11 0/0:0:0:0:0:23:0%:40:1E0:38:22:13:9:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:25:0%:44:1E0:39:24:14:10:26 0/0:0:0:0:0:8:0%:14:1E0:34:8:5:3:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:11:0%:17:1E0:39:10:7:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:43:7:2:5:8 0/0:0:0:0:0:22:0%:40:1E0:37:22:13:9:24 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:14 0/0:0:0:0:0:20:0%:36:1E0:47:20:13:7:21 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:13 0/0:0:0:0:0:14:0%:25:1E0:42:14:6:8:15 0/0:0:0:0:0:13:0%:25:1E0:38:13:10:3:13 0/0:0:0:0:0:11:0%:22:1E0:47:11:7:4:12 0/0:0:0:0:0:9:0%:18:1E0:40:9:5:4:9 0/0:0:0:0:0:18:0%:32:1E0:40:18:8:10:20 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:28:0%:51:1E0:35:28:14:14:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:28 0/0:0:0:0:0:17:0%:33:1E0:40:17:12:5:17 0/0:0:0:0:0:10:0%:17:1E0:47:10:8:2:10 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:0:0:0:0:12:0%:22:1E0:38:11:3:8:13 0/0:0:0:0:0:18:0%:32:1E0:38:18:9:9:19 0/0:0:0:0:0:13:0%:25:1E0:39:13:9:4:14 0/0:0:0:0:0:9:0%:14:1E0:47:8:6:2:10 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:18 0/0:0:0:0:0:18:0%:32:1E0:41:18:11:7:19 0/0:0:0:0:0:9:0%:18:1E0:43:9:4:5:9 0/0:0:0:0:0:22:0%:40:1E0:38:22:9:13:25 0/0:0:0:0:0:11:0%:22:1E0:43:11:7:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:27:0%:52:1E0:36:27:16:11:27 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:14:1E0:38:8:3:5:9 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:22 0/0:0:0:0:0:12:0%:21:1E0:36:12:5:7:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:18:0%:32:1E0:38:18:11:7:19 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:10 0/0:0:0:0:0:15:0%:29:1E0:39:15:7:8:16 0/0:0:0:0:0:14:0%:25:1E0:34:14:8:6:14 0/0:0:0:0:0:13:0%:25:1E0:39:13:6:7:13 0/0:0:0:0:0:8:0%:14:1E0:40:8:1:7:8 0/0:0:0:0:0:17:0%:33:1E0:46:17:15:2:18 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:31 0/0:0:0:0:0:11:0%:22:1E0:41:11:9:2:11 0/0:0:0:0:0:20:0%:37:1E0:45:19:13:6:24 0/0:0:0:0:0:9:0%:18:1E0:43:9:6:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:21 0/0:0:0:0:0:9:0%:18:1E0:41:9:5:4:10 0/0:0:0:0:0:9:0%:18:1E0:49:9:6:3:9 0/0:0:0:0:0:12:0%:21:1E0:41:12:6:6:12 0/0:0:0:0:0:9:0%:18:1E0:40:9:2:7:9 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:19 0/0:0:0:0:0:18:0%:32:1E0:47:18:15:3:19 0/0:0:0:0:0:12:0%:21:1E0:43:12:6:6:12 0/0:0:0:0:0:8:0%:14:1E0:39:8:2:6:10 0/0:0:0:0:0:9:0%:18:1E0:33:9:3:6:10 0/0:0:0:0:0:10:0%:17:1E0:38:10:2:8:10 0/0:0:0:0:0:24:0%:44:1E0:38:24:16:8:28 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:12 0/0:0:0:0:0:15:0%:29:1E0:43:15:7:8:15 0/0:0:0:0:0:12:0%:21:1E0:41:12:10:2:12 0/0:0:0:0:0:8:0%:14:1E0:46:8:4:4:8 0/0:0:0:0:0:7:0%:14:1E0:38:7:5:2:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:8:0%:14:1E0:39:7:5:2:8 0/0:0:0:0:0:11:0%:22:1E0:42:11:8:3:11 0/0:0:0:0:0:11:0%:22:1E0:42:11:6:5:11 0/0:0:0:0:0:10:0%:17:1E0:42:10:6:4:10 0/0:0:0:0:0:29:0%:55:1E0:37:29:17:12:32 0/0:0:0:0:0:8:0%:14:1E0:42:8:6:2:8 0/0:0:0:0:0:32:0%:59:1E0:40:31:19:12:34 0/0:0:0:0:0:9:0%:18:1E0:44:9:6:3:9 0/1:33:7:7:0:20:36.84%:23:3.9926E-3:36:12:6:6:21 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:20 0/0:0:0:0:0:25:0%:48:1E0:36:25:14:11:25 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:17 0/0:0:0:0:0:16:0%:29:1E0:34:16:8:8:17 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:20 0/0:0:0:0:0:12:0%:21:1E0:37:12:8:4:14 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:12:0%:21:1E0:39:12:7:5:12 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:30 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:23 0/0:0:0:0:0:22:0%:40:1E0:34:22:9:13:23 0/0:0:0:0:0:44:0%:81:1E0:37:44:27:17:47 0/0:0:0:0:0:24:0%:44:1E0:38:23:15:8:27 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:33:0%:59:1E0:36:32:15:17:35 0/0:0:0:0:0:9:0%:18:1E0:32:9:3:6:10 0/0:0:0:0:0:11:0%:22:1E0:36:11:5:6:11 0/0:31:3:3:0:16:18.75%:11:1.129E-1:37:13:4:9:19 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:22 0/0:0:0:0:0:14:0%:25:1E0:36:14:9:5:16 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:38 0/0:0:0:0:0:25:0%:44:1E0:34:24:14:10:28 0/0:0:0:0:0:16:0%:29:1E0:38:16:10:6:16 0/0:0:0:0:0:11:0%:17:1E0:33:10:5:5:13 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:10 0/0:0:0:0:0:9:0%:18:1E0:35:9:5:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:13:0%:25:1E0:40:13:9:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:25:1E0:36:13:9:4:13 0/0:0:0:0:0:11:0%:22:1E0:40:11:8:3:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:16:0%:29:1E0:37:15:9:6:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:36:9:7:2:10 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:17 0/0:0:0:0:0:17:0%:33:1E0:38:17:14:3:19 0/0:0:0:0:0:11:0%:22:1E0:41:11:7:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:10:0%:17:1E0:38:10:6:4:11 0/0:0:0:0:0:10:0%:17:1E0:42:10:7:3:10 0/0:0:0:0:0:12:0%:21:1E0:37:12:9:3:12 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:8 0/0:0:0:0:0:22:0%:40:1E0:38:22:16:6:24 0/0:0:0:0:0:24:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:14:0%:25:1E0:39:14:9:5:18 0/0:0:0:0:0:10:0%:17:1E0:42:10:6:4:10 MTB_anc 3948612 . A ACGGCGGCAC . PASS AC=110;AF=0.573;AN=192;ANN=ACGGCGGCAC|disruptive_inframe_insertion|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2846_2854dupCCGGCGGCA|p.Thr949_Gly951dup|2855/4470|2855/4470|952/1489||INFO_REALIGN_3_PRIME,ACGGCGGCAC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948612_3948613insCGGCGGCAC||||||,ACGGCGGCAC|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948612_3948613insCGGCGGCAC||||||;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:14:3:11:18:77.78%:65:2.5454E-7:38:2:1:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:6:3:3:8:75%:24:3.4965E-3:37:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:10:3:7:10:90.91%:47:1.7011E-5:37:1:1:0:12 1/1:35:10:5:5:11:90.91%:47:1.7011E-5:37:1:0:1:11 0/0:37:3:1:2:9:33.33%:4:1.0294E-1:36:6:0:6:10 1/1:35:13:2:11:15:92.86%:64:3.7391E-7:37:1:1:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:15:3:12:16:93.75%:75:2.8282E-8:38:1:0:1:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:6:0:6:7:100%:29:1.0823E-3:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:15:1:14:17:88.24%:71:7.3277E-8:33:2:1:1:17 0/1:36:11:2:9:13:84.62%:53:4.8074E-6:37:1:1:0:13 0/1:33:12:7:5:16:75%:50:8.0605E-6:31:4:0:4:16 0/1:30:7:2:5:9:70%:28:1.548E-3:34:3:1:2:10 0/1:32:6:1:5:13:42.86%:22:6.192E-3:36:5:0:5:14 1/1:33:9:2:7:8:100%:46:2.0568E-5:0:0:0:0:9 0/0:32:5:1:4:11:41.67%:3:1.7544E-2:36:6:4:2:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:31:8:2:6:16:47.06%:28:1.3389E-3:35:9:3:6:17 0/1:32:6:0:6:8:75%:24:3.4965E-3:37:2:1:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 1/1:35:20:5:15:21:95.24%:99:4.0873E-11:37:1:1:0:21 1/1:33:14:3:11:14:93.33%:69:1.0315E-7:35:1:0:1:15 0/1:35:11:3:8:15:73.33%:47:1.6951E-5:37:3:2:1:15 1/1:34:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:35:10:2:8:12:83.33%:47:1.7011E-5:37:1:1:0:12 0/1:35:7:1:6:9:87.5%:31:6.993E-4:38:1:0:1:9 0/1:31:15:5:10:16:83.33%:68:1.4655E-7:37:3:2:1:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:3:4:8:100%:35:2.9138E-4:0:0:0:0:8 0/0:33:4:1:3:11:36.36%:4:4.5113E-2:35:7:1:6:12 1/1:32:11:2:9:11:91.67%:53:4.8074E-6:37:1:0:1:13 0/1:34:6:0:6:7:85.71%:29:1.0823E-3:0:0:0:0:7 0/1:35:11:0:11:17:64.71%:43:4.3258E-5:36:6:1:5:17 0/1:34:10:5:5:11:83.33%:44:3.3652E-5:33:2:1:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. 0/0:36:5:0:5:17:29.41%:8:2.2239E-2:35:12:4:8:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:1:7:10:88.89%:36:2.0568E-4:37:1:1:0:10 0/1:34:10:2:8:13:76.92%:42:5.3843E-5:37:3:1:2:13 1/1:36:10:3:7:11:90.91%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:36:17:3:14:19:85%:78:1.2848E-8:37:3:3:0:20 0/1:31:7:1:6:9:77.78%:29:1.1312E-3:38:2:1:1:9 0/0:32:4:0:4:13:30.77%:3:4.3344E-2:36:6:1:5:14 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 0/1:35:6:0:6:7:85.71%:26:2.331E-3:38:1:0:1:7 0/0:37:3:1:2:10:30%:4:1.0526E-1:36:7:1:6:10 0/0:37:5:3:2:13:38.46%:4:1.9565E-2:36:8:4:4:14 0/1:31:7:2:5:16:43.75%:25:3.1609E-3:37:8:2:6:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:35:6:0:6:19:33.33%:20:9.5308E-3:33:12:6:6:19 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:12:5:7:16:75%:50:8.0605E-6:34:4:2:2:16 0/1:36:8:4:4:10:80%:34:3.5723E-4:35:2:0:2:10 0/1:28:7:3:4:7:77.78%:29:1.1312E-3:37:2:1:1:9 0/0:34:4:2:2:13:30.77%:4:4.6584E-2:39:8:1:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:35:9:0:9:10:90%:42:5.9538E-5:38:1:1:0:10 1/1:33:14:8:6:14:93.33%:76:2.4927E-8:0:0:0:0:15 0/1:36:6:1:5:8:85.71%:26:2.331E-3:35:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:32:8:0:8:8:88.89%:36:2.0568E-4:37:1:0:1:9 0/1:31:7:0:7:22:31.82%:23:4.3101E-3:35:14:4:10:22 0/1:35:8:2:6:9:88.89%:36:2.0568E-4:36:1:0:1:9 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:36:5:1:4:7:83.33%:21:7.5758E-3:37:1:1:0:7 0/1:35:6:2:4:7:85.71%:26:2.331E-3:34:1:0:1:7 0/0:37:3:0:3:9:33.33%:4:1.0294E-1:36:6:3:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:15:2:13:18:83.33%:68:1.4655E-7:36:3:0:3:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:30:19:2:17:17:95%:99:2.8292E-11:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:13:3:10:13:92.86%:64:3.7391E-7:38:1:1:0:14 1/1:31:13:3:10:13:92.86%:64:3.7391E-7:34:1:1:0:14 0/0:32:5:2:3:16:31.25%:6:2.1691E-2:33:11:1:10:16 1/1:31:8:0:8:7:100%:41:7.77E-5:0:0:0:0:8 1/1:34:13:1:12:14:92.86%:70:9.6148E-8:0:0:0:0:14 1/1:34:10:2:8:11:90.91%:47:1.7011E-5:37:1:1:0:11 0/0:34:4:0:4:10:40%:3:4.3344E-2:35:6:2:4:10 0/1:36:6:0:6:11:54.55%:22:6.192E-3:34:5:0:5:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 0/1:35:18:5:13:21:85.71%:84:3.7603E-9:36:3:1:2:21 0/1:35:10:1:9:13:76.92%:44:3.3652E-5:36:2:0:2:13 0/1:32:11:0:11:12:84.62%:49:1.0096E-5:38:2:0:2:13 1/1:34:23:4:19:25:92%:99:2.7767E-12:37:2:1:1:26 0/1:35:16:5:11:20:84.21%:73:4.357E-8:37:3:2:1:20 0/1:31:13:3:10:15:81.25%:57:1.6121E-6:38:3:0:3:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:22:1:21:24:95.65%:99:2.9149E-12:33:1:1:0:24 1/1:32:12:0:12:12:92.31%:58:1.3461E-6:38:1:1:0:13 1/1:34:8:2:6:7:100%:41:7.77E-5:0:0:0:0:8 0/1:34:7:1:6:11:63.64%:27:1.935E-3:35:4:0:4:11 0/0:0:0:0:0:18:0%:32:1E0:32:18:6:12:18 0/0:31:5:0:5:10:45.45%:3:1.7544E-2:35:6:2:4:11 0/1:31:8:2:6:18:42.11%:28:1.4461E-3:35:10:3:7:19 0/0:0:0:0:0:33:0%:63:1E0:35:33:9:24:36 0/1:33:12:0:12:15:85.71%:58:1.3461E-6:38:1:0:1:15 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 0/0:37:3:0:3:12:27.27%:7:1.0714E-1:36:8:2:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:3:5:9:88.89%:36:2.0568E-4:29:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:32:6:0:6:9:60%:22:5.418E-3:34:4:2:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:14:2:12:24:58.33%:54:3.4067E-6:33:9:5:4:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:6:2:4:8:75%:26:2.331E-3:37:1:1:0:8 1/1:34:9:2:7:9:90%:42:5.9538E-5:32:1:0:1:10 0/0:31:4:0:4:13:30.77%:4:4.5113E-2:34:7:4:3:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:34:6:1:5:18:33.33%:20:8.837E-3:34:10:3:7:19 0/0:35:4:1:3:17:25%:8:4.9808E-2:35:11:2:9:18 0/1:37:7:0:7:9:77.78%:29:1.1312E-3:37:2:0:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3948631 . C A . PASS AC=1;AF=5.747e-03;AN=174;ANN=A|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2838C>A|p.Thr946Thr|2838/4470|2838/4470|946/1489||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948631C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948631C>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. ./. ./. 0/1:36:6:3:3:16:37.5%:20:7.971E-3:33:8:2:6:17 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:13 0/0:0:0:0:0:30:0%:55:1E0:36:30:10:20:31 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:28 0/0:0:0:0:0:35:0%:67:1E0:37:35:15:20:35 0/0:0:0:0:0:10:0%:17:1E0:37:10:7:3:10 0/0:0:0:0:0:19:0%:37:1E0:35:19:5:14:20 0/0:0:0:0:0:11:0%:22:1E0:41:11:4:7:11 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:22 0/0:0:0:0:0:11:0%:22:1E0:36:11:6:5:11 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:12 ./. 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:20 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:27 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:19 0/0:0:0:0:0:9:0%:18:1E0:39:9:6:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:18:0%:32:1E0:35:18:5:13:18 0/0:0:0:0:0:23:0%:44:1E0:36:23:10:13:23 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:19 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:26 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:20 ./. 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:15 0/0:0:0:0:0:12:0%:21:1E0:35:12:2:10:12 ./. ./. ./. 0/0:36:5:4:1:12:45.45%:3:1.7544E-2:36:6:2:4:12 ./. 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:22 0/0:45:3:2:1:16:18.75%:9:1.1111E-1:41:11:6:5:16 0/0:0:0:0:0:16:0%:29:1E0:35:16:5:11:17 ./. 0/0:36:5:3:2:18:27.78%:6:2.1073E-2:36:10:4:6:18 0/0:0:0:0:0:17:0%:33:1E0:35:17:3:14:17 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:25 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:16 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:12 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:13 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:13 ./. 0/0:0:0:0:0:14:0%:25:1E0:38:14:5:9:15 0/0:0:0:0:0:13:0%:25:1E0:34:13:2:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:10:0%:17:1E0:34:10:2:8:10 ./. 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:14 0/0:0:0:0:0:31:0%:59:1E0:36:31:7:24:31 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:9 0/0:0:0:0:0:29:0%:55:1E0:37:29:9:20:29 0/0:0:0:0:0:9:0%:18:1E0:39:9:5:4:9 0/0:0:0:0:0:23:0%:44:1E0:35:23:9:14:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:7:15:22 ./. 0/0:0:0:0:0:14:0%:25:1E0:35:14:1:13:14 0/0:0:0:0:0:22:0%:40:1E0:38:22:6:16:23 0/0:0:0:0:0:19:0%:37:1E0:35:19:5:14:19 0/0:38:3:1:2:14:21.43%:6:1.087E-1:36:9:2:7:14 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:17 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:31 0/0:0:0:0:0:24:0%:44:1E0:35:24:4:20:26 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:28 0/0:0:0:0:0:41:0%:74:1E0:36:40:11:29:44 0/0:0:0:0:0:31:0%:59:1E0:36:31:13:18:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:7:21:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:29:0%:55:1E0:37:29:6:23:31 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:16 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 0/0:0:0:0:0:21:0%:40:1E0:34:21:4:17:23 0/0:29:5:3:2:22:21.74%:14:2.4548E-2:35:18:5:13:23 ./. ./. ./. 0/0:0:0:0:0:26:0%:48:1E0:37:25:5:20:26 0/0:0:0:0:0:15:0%:29:1E0:40:15:4:11:15 ./. 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:11 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:15 0/0:0:0:0:0:8:0%:14:1E0:35:8:0:8:8 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:8 0/0:36:4:1:3:14:28.57%:6:4.7826E-2:36:9:2:7:14 0/0:36:1:0:1:9:11.11%:8:5E-1:37:7:2:5:9 ./. 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:11 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:17 0/0:0:0:0:0:15:0%:29:1E0:35:15:5:10:15 ./. 0/0:38:2:0:2:10:20%:7:2.3529E-1:36:7:4:3:12 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:9 ./. 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:11 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:0:0:0:0:8:0%:14:1E0:39:8:2:6:9 ./. ./. 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:22 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:10 MTB_anc 3948631 . C CGGCGGCAAA . PASS AC=24;AF=0.092;AN=262;ANN=CGGCGGCAAA|disruptive_inframe_insertion|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.2845_2846insAAGGCGGCA|p.Gly948_Thr949insLysGlyGly|2846/4470|2846/4470|949/1489||INFO_REALIGN_3_PRIME,CGGCGGCAAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948631_3948632insGGCGGCAAA||||||,CGGCGGCAAA|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948631_3948632insGGCGGCAAA||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:29:0%:55:1E0:35:29:9:20:29 0/0:0:0:0:0:7:0%:14:1E0:39:7:3:4:7 0/0:0:0:0:0:18:0%:32:1E0:36:18:9:9:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:17:0%:33:1E0:38:17:6:11:17 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:15 0/1:40:6:0:6:14:42.86%:21:7.4534E-3:36:7:1:6:14 0/0:0:0:0:0:23:0%:44:1E0:36:23:7:16:24 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:7 0/0:0:0:0:0:23:0%:44:1E0:37:23:8:15:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:16:0%:29:1E0:35:16:3:13:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:40:9:2:7:9 0/0:0:0:0:0:25:0%:48:1E0:35:25:8:17:26 0/0:0:0:0:0:18:0%:32:1E0:36:18:7:11:18 0/0:0:0:0:0:21:0%:40:1E0:34:21:10:11:21 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:13 0/0:32:5:0:5:19:26.32%:8:2.2727E-2:39:13:5:8:20 0/0:0:0:0:0:16:0%:29:1E0:37:16:4:12:17 0/1:34:9:5:4:20:45%:32:5.1645E-4:39:9:2:7:21 0/0:0:0:0:0:17:0%:33:1E0:39:17:3:14:18 0/1:37:7:3:4:25:28%:23:4.158E-3:36:13:4:9:25 0/0:0:0:0:0:16:0%:29:1E0:36:16:5:11:17 0/0:0:0:0:0:7:0%:14:1E0:35:7:1:6:8 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:11 0/0:0:0:0:0:7:0%:14:1E0:35:7:5:2:7 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:13 0/0:0:0:0:0:30:0%:55:1E0:36:30:10:20:31 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:28 0/0:0:0:0:0:35:0%:67:1E0:37:35:15:20:35 0/0:0:0:0:0:10:0%:17:1E0:37:10:7:3:10 0/0:0:0:0:0:19:0%:37:1E0:35:19:5:14:20 0/0:0:0:0:0:11:0%:22:1E0:41:11:4:7:11 0/0:0:0:0:0:20:0%:36:1E0:37:20:8:12:22 0/0:0:0:0:0:11:0%:22:1E0:36:11:6:5:11 0/0:0:0:0:0:10:0%:17:1E0:41:10:5:5:12 0/1:34:10:2:8:18:55.56%:38:1.4831E-4:35:7:1:6:18 0/0:0:0:0:0:20:0%:36:1E0:36:20:6:14:20 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:27 0/0:0:0:0:0:18:0%:32:1E0:36:18:12:6:19 0/0:0:0:0:0:9:0%:18:1E0:39:9:6:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:39:12:4:8:24:50%:44:3.4748E-5:37:11:3:8:24 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:18:0%:32:1E0:35:18:5:13:18 0/0:0:0:0:0:23:0%:44:1E0:36:23:10:13:23 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:19 0/0:0:0:0:0:7:0%:14:1E0:37:7:4:3:7 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:26 0/0:0:0:0:0:19:0%:37:1E0:37:19:7:12:20 0/1:35:8:1:7:20:40%:27:1.638E-3:37:12:2:10:20 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:15 0/0:0:0:0:0:12:0%:21:1E0:35:12:2:10:12 0/1:40:9:1:8:14:64.29%:35:2.8986E-4:46:5:3:2:14 0/1:37:8:3:5:18:44.44%:28:1.3389E-3:37:9:4:5:18 0/1:36:10:4:6:23:43.48%:35:2.8066E-4:38:13:7:6:24 0/0:36:5:4:1:12:45.45%:3:1.7544E-2:36:6:2:4:12 0/1:36:15:7:8:26:57.69%:58:1.4522E-6:38:10:1:9:26 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:22 0/0:45:3:2:1:16:18.75%:9:1.1111E-1:41:11:6:5:16 0/0:0:0:0:0:16:0%:29:1E0:35:16:5:11:17 0/1:40:7:1:6:16:43.75%:25:2.8986E-3:37:7:4:3:16 0/0:36:5:3:2:18:27.78%:6:2.1073E-2:36:10:4:6:18 0/0:0:0:0:0:17:0%:33:1E0:35:17:3:14:17 0/0:0:0:0:0:24:0%:44:1E0:36:24:12:12:25 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:16 0/0:0:0:0:0:12:0%:21:1E0:36:12:2:10:12 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:13 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:13 0/1:37:13:2:11:28:46.43%:47:1.81E-5:36:14:3:11:29 0/0:0:0:0:0:14:0%:25:1E0:38:14:5:9:15 0/0:0:0:0:0:13:0%:25:1E0:34:13:2:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:0:0:0:0:10:0%:17:1E0:34:10:2:8:10 0/1:39:7:3:4:17:41.18%:24:3.3988E-3:42:9:2:7:18 0/0:0:0:0:0:13:0%:25:1E0:35:13:5:8:14 0/0:0:0:0:0:31:0%:59:1E0:36:31:7:24:31 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:9 0/0:0:0:0:0:29:0%:55:1E0:37:29:9:20:29 0/0:0:0:0:0:9:0%:18:1E0:39:9:5:4:9 0/0:0:0:0:0:23:0%:44:1E0:35:23:9:14:23 0/0:0:0:0:0:22:0%:40:1E0:37:22:7:15:22 0/1:36:14:2:12:24:58.33%:54:3.4067E-6:36:9:3:6:25 0/0:0:0:0:0:14:0%:25:1E0:35:14:1:13:14 0/0:0:0:0:0:22:0%:40:1E0:38:22:6:16:23 0/0:0:0:0:0:19:0%:37:1E0:35:19:5:14:19 0/0:38:3:1:2:14:21.43%:6:1.087E-1:36:9:2:7:14 0/1:36:10:4:6:20:50%:36:2.1796E-4:35:10:3:7:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:15:0%:29:1E0:41:15:8:7:17 0/0:0:0:0:0:30:0%:55:1E0:37:30:9:21:31 0/0:0:0:0:0:24:0%:44:1E0:35:24:4:20:26 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:28 0/0:0:0:0:0:41:0%:74:1E0:36:40:11:29:44 0/0:0:0:0:0:31:0%:59:1E0:36:31:13:18:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:7:21:28 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:29:0%:55:1E0:37:29:6:23:31 0/0:0:0:0:0:15:0%:29:1E0:36:15:2:13:16 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 0/0:0:0:0:0:21:0%:40:1E0:34:21:4:17:23 0/0:29:5:3:2:22:21.74%:14:2.4548E-2:35:18:5:13:23 0/1:36:6:2:4:12:50%:21:6.865E-3:36:6:1:5:12 0/1:36:11:4:7:21:52.38%:40:8.2399E-5:37:10:3:7:21 0/1:37:20:5:15:42:47.62%:73:4.7857E-8:35:22:8:14:42 0/0:0:0:0:0:26:0%:48:1E0:37:25:5:20:26 0/0:0:0:0:0:15:0%:29:1E0:40:15:4:11:15 0/1:34:10:1:9:16:62.5%:39:1.2413E-4:35:6:2:4:18 0/0:0:0:0:0:10:0%:17:1E0:37:10:2:8:11 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:0:0:0:0:14:0%:25:1E0:36:14:5:9:15 0/0:0:0:0:0:8:0%:14:1E0:35:8:0:8:8 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:8 0/0:36:4:1:3:14:28.57%:6:4.7826E-2:36:9:2:7:14 0/0:36:1:0:1:9:11.11%:8:5E-1:37:7:2:5:9 0/1:36:9:5:4:33:27.27%:30:9.678E-4:36:21:5:16:34 0/0:0:0:0:0:10:0%:17:1E0:36:10:5:5:11 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:17 0/0:0:0:0:0:15:0%:29:1E0:35:15:5:10:15 0/1:36:9:4:5:21:42.86%:31:6.592E-4:36:12:4:8:22 0/0:38:2:0:2:10:20%:7:2.3529E-1:36:7:4:3:12 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:9 0/1:34:8:1:7:14:57.14%:30:9.6618E-4:36:6:2:4:14 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:11 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:0:0:0:0:8:0%:14:1E0:39:8:2:6:9 0/1:36:13:3:10:25:52%:49:1.1242E-5:35:10:3:7:25 0/1:36:16:6:10:23:69.57%:66:2.4726E-7:35:7:2:5:23 0/0:0:0:0:0:20:0%:36:1E0:38:20:8:12:22 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:10 MTB_anc 3948929 . A G . PASS AC=130;AF=1.00;AN=130;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3136A>G|p.Ile1046Val|3136/4470|3136/4470|1046/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948929A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948929A>G||||||;HET=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. 1/1:37:13:2:11:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:42:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:36:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:1:7:9:100%:41:7.77E-5:0:0:0:0:9 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 ./. 1/1:35:9:2:7:10:100%:46:2.0568E-5:0:0:0:0:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:42:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./. 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./. 1/1:36:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:32:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./. 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 MTB_anc 3948930 . T C . PASS AC=87;AF=0.989;AN=88;ANN=C|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3137T>C|p.Ile1046Thr|3137/4470|3137/4470|1046/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948930T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948930T>C||||||;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 1/1:35:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:32:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. 1/1:32:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./. 1/1:34:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:33:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:18:0:18:18:100%:99:1.1019E-10:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:33:8:1:7:9:88.89%:41:7.77E-5:0:0:0:0:9 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:34:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./. 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:18:1:17:18:100%:99:1.1019E-10:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./. 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3948932 . T G . PASS AC=96;AF=1.00;AN=96;ANN=G|stop_lost|HIGH|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3139T>G|p.Ter1047Glyext*?|3139/4470|3139/4470|1047/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948932T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948932T>G||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:11:0:11:12:91.67%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. 1/1:35:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./. 1/1:37:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:11:0:11:12:91.67%:53:4.8074E-6:34:1:0:1:12 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./. 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:33:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./. 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3948934 . A C . PASS AC=88;AF=1.00;AN=88;ANN=C|stop_lost|HIGH|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3141A>C|p.Ter1047Cysext*?|3141/4470|3141/4470|1047/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948934A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948934A>C||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:34:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. 1/1:34:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./. 1/1:33:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:33:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:19:1:18:20:95%:98:1.5234E-10:37:1:0:1:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:32:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:0:10:11:90.91%:47:1.7011E-5:37:1:0:1:12 1/1:35:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 ./. 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./. 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3948935 . T G . PASS AC=96;AF=1.00;AN=96;ANN=G|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3142T>G|p.Cys1048Gly|3142/4470|3142/4470|1048/1489||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948935T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948935T>G||||||;HET=0;WT=0;set=variant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:13:0:13:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. 1/1:37:13:1:12:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./. 1/1:37:7:0:7:8:100%:35:2.9138E-4:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./. 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./. ./. 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3948939 . C A . PASS AC=104;AF=0.981;AN=106;ANN=A|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3146C>A|p.Thr1049Lys|3146/4470|3146/4470|1049/1489||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3948939C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3948939C>A||||||;WT=0;set=filterInvariant-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:12:0:12:13:92.31%:58:1.3461E-6:32:1:1:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./. 1/1:36:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./. 0/1:37:8:0:8:9:88.89%:36:2.0568E-4:38:1:0:1:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:39:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:1:19:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:7:1:6:8:87.5%:31:6.993E-4:33:1:1:0:8 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:14:0:14:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:12:0:12:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./. 1/1:37:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:35:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./. ./. 1/1:37:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 MTB_anc 3949000 . G C . PASS AC=6;AF=0.032;AN=190;ANN=C|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3207G>C|p.Gly1069Gly|3207/4470|3207/4470|1069/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3949000G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3949000G>C||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:33:2:1:1:24:8.33%:27:2.4468E-1:36:22:5:17:24 0/0:49:2:1:1:8:25%:5:2.3333E-1:34:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:15:0%:29:1E0:41:15:4:11:17 0/0:0:0:0:0:10:0%:17:1E0:33:10:1:9:10 0/0:0:0:0:0:12:0%:21:1E0:39:12:4:8:13 ./. 0/0:49:2:1:1:10:20%:7:2.3684E-1:36:8:4:4:10 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:38:1:1:0:16:6.25%:21:5E-1:38:15:3:12:16 0/0:49:2:1:1:10:20%:7:2.3684E-1:35:8:2:6:10 0/0:30:1:0:1:13:8.33%:14:5E-1:37:11:4:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 ./. ./. 0/0:29:1:0:1:20:5%:27:5E-1:37:19:6:13:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/0:42:5:2:3:11:45.45%:3:1.7544E-2:36:6:2:4:11 0/0:0:0:0:0:13:0%:25:1E0:35:13:4:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:7 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 0/0:35:2:1:1:13:15.38%:13:2.4E-1:40:11:3:8:13 0/0:0:0:0:0:10:0%:17:1E0:36:10:2:8:10 0/0:36:1:0:1:9:11.11%:11:5E-1:36:8:1:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:39:13:3:10:13 0/0:50:5:3:2:19:26.32%:10:2.3166E-2:36:14:5:9:19 0/0:0:0:0:0:13:0%:25:1E0:38:13:2:11:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:37:2:0:2:14:14.29%:12:2.4074E-1:36:12:2:10:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:60:2:1:1:10:20%:7:2.3684E-1:35:8:3:5:11 0/0:37:2:1:1:11:18.18%:10:2.381E-1:36:9:0:9:11 0/1:45:6:4:2:15:40%:20:8.4291E-3:35:9:3:6:16 0/0:0:0:0:0:12:0%:21:1E0:38:12:4:8:12 0/0:41:5:3:2:14:35.71%:4:2.037E-2:36:9:4:5:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:34:3:2:1:9:33.33%:4:1.0294E-1:34:6:2:4:11 0/0:34:1:0:1:20:5%:27:5E-1:34:19:6:13:20 0/0:38:2:2:0:13:15.38%:13:2.4E-1:36:11:0:11:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:24:0%:44:1E0:35:24:8:16:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:15 0/0:0:0:0:0:8:0%:14:1E0:36:8:4:4:9 ./. 0/0:45:3:3:0:12:25%:6:1.087E-1:38:9:3:6:13 0/0:48:2:1:1:17:11.76%:18:2.4242E-1:38:15:5:10:18 0/0:0:0:0:0:7:0%:14:1E0:36:7:0:7:7 0/0:0:0:0:0:13:0%:25:1E0:36:13:1:12:13 0/0:38:1:1:0:10:10%:11:5E-1:35:9:2:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:17:0%:33:1E0:36:17:2:15:18 0/0:0:0:0:0:14:0%:25:1E0:36:14:0:14:15 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 0/0:0:0:0:0:13:0%:25:1E0:38:13:5:8:13 0/0:60:1:0:1:9:11.11%:11:5E-1:36:8:3:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:32:2:0:2:8:25%:5:2.3333E-1:39:6:2:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:10:0%:17:1E0:39:10:3:7:10 0/0:0:0:0:0:19:0%:37:1E0:35:19:4:15:19 0/0:0:0:0:0:7:0%:14:1E0:39:7:2:5:7 0/0:28:1:1:0:11:9.09%:14:5E-1:40:10:3:7:11 0/0:60:1:0:1:13:7.69%:18:5E-1:38:12:3:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:1:0:1:9:11.11%:11:5E-1:35:8:3:5:9 0/0:34:5:3:2:11:45.45%:3:1.7544E-2:37:6:1:5:11 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:9 0/0:58:1:1:0:7:14.29%:8:5E-1:40:6:1:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 0/0:0:0:0:0:7:0%:14:1E0:37:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:13 0/0:0:0:0:0:10:0%:17:1E0:37:10:1:9:10 0/0:52:3:1:2:17:17.65%:14:1.1364E-1:36:14:0:14:18 0/0:49:2:2:0:11:18.18%:10:2.381E-1:37:9:2:7:12 0/0:29:1:0:1:16:6.25%:21:5E-1:36:15:5:10:17 0/0:0:0:0:0:7:0%:14:1E0:37:7:0:7:8 1/1:37:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 0/0:57:3:1:2:19:15.79%:17:1.1486E-1:35:16:3:13:19 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:9 0/0:60:2:2:0:17:11.76%:18:2.4242E-1:34:15:0:15:18 0/0:31:1:1:0:14:7.14%:17:5E-1:38:13:1:12:16 0/0:50:1:1:0:14:7.14%:17:5E-1:38:13:5:8:15 0/0:34:1:1:0:7:14.29%:8:5E-1:33:6:1:5:8 0/0:0:0:0:0:7:0%:14:1E0:36:7:0:7:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:48:2:2:0:10:20%:7:2.3684E-1:37:8:0:8:10 0/0:35:2:0:2:15:13.33%:16:2.4138E-1:39:13:5:8:15 0/0:28:1:0:1:10:10%:11:5E-1:41:9:2:7:11 0/0:35:2:1:1:14:14.29%:12:2.4074E-1:36:12:4:8:14 0/0:39:4:3:1:21:19.05%:15:5.3471E-2:37:17:7:10:21 0/0:34:2:0:2:22:9.09%:24:2.4419E-1:36:20:4:16:22 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:36:1:0:1:19:5.26%:28:5E-1:38:18:10:8:20 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 0/0:0:0:0:0:11:0%:22:1E0:36:11:2:9:11 0/0:35:1:1:0:10:10%:11:5E-1:36:9:1:8:10 0/0:0:0:0:0:11:0%:22:1E0:35:11:0:11:11 0/0:0:0:0:0:24:0%:44:1E0:39:24:3:21:24 0/1:35:6:4:2:17:35.29%:20:9.2021E-3:38:11:2:9:19 0/0:38:1:1:0:13:7.69%:18:5E-1:36:12:2:10:14 0/0:0:0:0:0:7:0%:14:1E0:36:7:0:7:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:39:8:1:7:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:7:0%:14:1E0:36:7:0:7:7 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:10 0/0:60:2:1:1:12:16.67%:10:2.3913E-1:35:10:2:8:12 0/0:60:1:1:0:7:14.29%:8:5E-1:37:6:1:5:8 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:13 0/0:38:1:1:0:9:11.11%:11:5E-1:39:8:3:5:9 0/0:44:2:1:1:9:22.22%:7:2.3529E-1:37:7:0:7:9 MTB_anc 3949001 . G A . PASS AC=5;AF=0.026;AN=196;ANN=A|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3208G>A|p.Ala1070Thr|3208/4470|3208/4470|1070/1489||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3949001G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3949001G>A||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:34:2:1:1:24:8.33%:27:2.4468E-1:36:22:5:17:24 0/0:49:2:1:1:8:25%:5:2.3333E-1:35:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:17:0%:33:1E0:40:17:5:12:17 0/0:0:0:0:0:10:0%:17:1E0:36:10:1:9:10 0/0:0:0:0:0:13:0%:25:1E0:39:13:5:8:13 ./. 0/0:49:2:1:1:10:20%:7:2.3684E-1:36:8:4:4:10 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:34:1:1:0:15:6.67%:21:5E-1:39:14:3:11:15 0/0:49:2:1:1:9:22.22%:7:2.3529E-1:36:7:2:5:10 0/0:34:1:0:1:10:11.11%:11:5E-1:39:8:3:5:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:8 ./. ./. 0/0:0:0:0:0:19:0%:37:1E0:38:19:6:13:20 0/0:62:2:1:1:8:25%:5:2.3333E-1:37:6:1:5:9 0/0:46:5:2:3:11:45.45%:3:1.7544E-2:36:6:2:4:11 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:7 0/0:0:0:0:0:7:0%:14:1E0:36:7:2:5:8 0/0:35:2:1:1:13:15.38%:13:2.4E-1:41:11:3:8:13 0/0:0:0:0:0:9:0%:18:1E0:35:9:2:7:9 0/0:36:1:0:1:10:10%:11:5E-1:36:9:1:8:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:13:0%:25:1E0:38:13:3:10:13 0/0:48:5:3:2:19:26.32%:10:2.3166E-2:36:14:5:9:19 0/0:0:0:0:0:13:0%:25:1E0:38:13:2:11:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:36:2:0:2:14:14.29%:12:2.4074E-1:36:12:2:10:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:60:2:1:1:10:20%:7:2.3684E-1:35:8:3:5:11 0/0:37:2:1:1:11:18.18%:10:2.381E-1:36:9:0:9:11 0/1:46:6:4:2:15:40%:20:8.4291E-3:34:9:3:6:16 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 0/0:41:4:2:2:16:25%:8:5.0612E-2:36:12:5:7:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:36:2:1:1:10:20%:7:2.3684E-1:34:8:2:6:11 0/0:0:0:0:0:18:0%:32:1E0:35:18:6:12:20 0/0:38:2:2:0:13:15.38%:13:2.4E-1:37:11:0:11:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:25:0%:48:1E0:35:25:8:17:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:45:3:2:1:9:33.33%:4:1.0294E-1:34:6:1:5:9 0/0:0:0:0:0:15:0%:29:1E0:38:15:3:12:15 0/0:34:1:1:0:8:12.5%:8:5E-1:37:6:3:3:9 ./. 0/0:45:3:3:0:12:25%:6:1.087E-1:38:9:3:6:12 0/0:48:2:1:1:18:11.11%:18:2.4286E-1:38:16:6:10:18 0/0:0:0:0:0:7:0%:14:1E0:36:7:0:7:7 0/0:0:0:0:0:13:0%:25:1E0:35:13:1:12:13 0/0:38:1:1:0:10:10%:11:5E-1:36:9:2:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:18:0%:32:1E0:36:18:2:16:18 0/0:0:0:0:0:14:0%:25:1E0:35:14:1:13:14 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 0/0:0:0:0:0:13:0%:25:1E0:37:13:5:8:13 0/0:49:2:0:2:10:20%:7:2.3684E-1:37:8:3:5:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:31:2:0:2:8:25%:5:2.3333E-1:40:6:2:4:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/0:0:0:0:0:10:0%:17:1E0:40:10:3:7:10 0/0:0:0:0:0:18:0%:32:1E0:36:18:4:14:19 0/0:0:0:0:0:7:0%:14:1E0:39:7:2:5:7 0/0:0:0:0:0:10:0%:17:1E0:39:10:3:7:11 0/0:60:1:0:1:13:7.69%:18:5E-1:39:12:3:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:38:1:0:1:8:12.5%:8:5E-1:35:7:3:4:9 0/0:34:5:3:2:11:45.45%:3:1.7544E-2:36:6:1:5:11 0/0:0:0:0:0:9:0%:18:1E0:37:9:2:7:9 0/0:50:1:1:0:7:14.29%:8:5E-1:39:6:1:5:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:7:0%:14:1E0:36:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:34:1:0:1:12:8.33%:14:5E-1:35:11:2:9:13 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:10 0/0:52:3:1:2:18:16.67%:14:1.1429E-1:36:15:0:15:18 0/0:49:2:2:0:12:16.67%:10:2.3913E-1:37:10:2:8:12 0/0:24:1:0:1:17:5.88%:24:5E-1:37:16:6:10:17 0/0:0:0:0:0:8:0%:14:1E0:37:8:0:8:8 1/1:38:11:1:10:11:100%:58:1.4176E-6:0:0:0:0:11 0/0:56:3:1:2:19:15.79%:17:1.1486E-1:36:16:3:13:19 0/0:31:1:0:1:10:10%:11:5E-1:35:9:1:8:10 0/0:60:2:2:0:18:11.11%:18:2.4286E-1:34:16:1:15:18 0/0:33:1:1:0:15:6.67%:21:5E-1:38:14:2:12:16 0/0:50:1:1:0:15:6.67%:21:5E-1:38:14:5:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:8:0%:14:1E0:36:8:1:7:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:48:2:2:0:10:20%:7:2.3684E-1:37:8:0:8:10 0/0:36:2:0:2:15:13.33%:16:2.4138E-1:39:13:5:8:15 0/0:31:1:0:1:11:9.09%:14:5E-1:40:10:3:7:11 0/0:35:2:1:1:14:14.29%:12:2.4074E-1:35:12:4:8:14 0/0:44:3:2:1:20:15%:16:1.1538E-1:38:17:7:10:21 0/0:35:2:0:2:22:9.09%:24:2.4419E-1:37:20:4:16:22 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:36:1:0:1:20:5%:27:5E-1:38:19:10:9:20 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:11 0/0:35:1:1:0:9:11.11%:11:5E-1:36:8:1:7:10 0/0:0:0:0:0:10:0%:17:1E0:36:10:0:10:11 0/0:0:0:0:0:24:0%:44:1E0:39:24:3:21:24 0/0:36:5:4:1:18:27.78%:8:2.2727E-2:37:13:3:10:19 0/0:38:1:1:0:14:7.14%:17:5E-1:36:13:2:11:14 0/0:0:0:0:0:7:0%:14:1E0:34:7:0:7:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 0/0:34:1:1:0:7:14.29%:8:5E-1:35:6:3:3:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:9:0%:18:1E0:38:9:1:8:9 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:7:0%:14:1E0:36:7:0:7:7 0/0:0:0:0:0:10:0%:17:1E0:35:10:2:8:10 0/0:52:2:1:1:11:18.18%:10:2.381E-1:36:9:1:8:12 0/0:60:1:1:0:7:14.29%:8:5E-1:37:6:1:5:8 0/0:0:0:0:0:16:0%:29:1E0:36:16:2:14:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:9:0%:18:1E0:40:9:4:5:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:7:0%:14:1E0:39:7:1:6:7 0/0:0:0:0:0:13:0%:25:1E0:35:13:2:11:13 0/0:34:1:1:0:9:11.11%:11:5E-1:40:8:3:5:9 0/0:49:2:1:1:9:22.22%:7:2.3529E-1:37:7:0:7:9 MTB_anc 3949453 . C T . PASS AC=76;AF=1.00;AN=76;ANN=T|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3660C>T|p.Gly1220Gly|3660/4470|3660/4470|1220/1489||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3949453C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3949453C>T||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:1:8:10:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:31:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:40:8:2:6:8:100%:41:7.77E-5:0:0:0:0:10 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:32:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:1:7:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:42:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 MTB_anc 3949455 . G A . PASS AC=64;AF=1.00;AN=64;ANN=A|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3662G>A|p.Gly1221Asp|3662/4470|3662/4470|1221/1489||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3949455G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3949455G>A||||||;HET=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:8:0:8:9:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:1:11:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:1:7:8:100%:41:7.77E-5:0:0:0:0:10 1/1:32:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:32:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:1:7:8:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. 1/1:37:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:9:0:9:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:2:10:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:10:0:10:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:36:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:34:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:11:0:11:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3949600 . G C . PASS AC=6;AF=0.024;AN=250;ANN=C|synonymous_variant|LOW|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3807G>C|p.Gly1269Gly|3807/4470|3807/4470|1269/1489||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3949600G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3949600G>C||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:11:0%:22:1E0:34:11:2:9:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:44:3:2:1:15:20%:11:1.1207E-1:35:12:3:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:8:0%:14:1E0:43:8:3:5:9 0/0:0:0:0:0:9:0%:18:1E0:36:9:5:4:9 0/0:0:0:0:0:10:0%:17:1E0:37:10:3:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:0:1:11:9.09%:14:5E-1:34:10:2:8:12 0/0:0:0:0:0:12:0%:21:1E0:43:12:4:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:18:0%:32:1E0:38:18:5:13:18 0/0:0:0:0:0:16:0%:29:1E0:36:16:3:13:16 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:7:0%:14:1E0:39:7:2:5:7 0/0:38:1:1:0:8:12.5%:8:5E-1:39:7:2:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 0/0:0:0:0:0:18:0%:32:1E0:35:18:6:12:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:38:9:3:6:9 0/0:0:0:0:0:21:0%:40:1E0:38:21:9:12:21 0/0:36:5:3:2:15:33.33%:6:2.1073E-2:36:10:3:7:16 0/0:0:0:0:0:10:0%:17:1E0:36:10:0:10:11 0/1:42:8:3:5:27:29.63%:26:2.1337E-3:40:19:7:12:28 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:13 0/1:40:8:2:6:28:28.57%:26:2.188E-3:36:20:5:15:28 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:10 0/0:0:0:0:0:14:0%:25:1E0:35:14:3:11:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:25:1E0:39:13:7:6:13 0/0:0:0:0:0:9:0%:18:1E0:42:9:2:7:9 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:34:1:0:1:17:5.88%:24:5E-1:37:16:5:11:17 0/0:0:0:0:0:27:0%:52:1E0:38:27:8:19:28 0/0:0:0:0:0:13:0%:25:1E0:37:13:4:9:14 0/0:0:0:0:0:10:0%:17:1E0:38:10:7:3:10 0/0:0:0:0:0:11:0%:22:1E0:35:11:6:5:12 0/0:0:0:0:0:19:0%:32:1E0:36:18:6:12:19 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:42:5:1:4:22:22.73%:12:2.4248E-2:37:17:6:11:24 0/0:0:0:0:0:22:0%:40:1E0:37:22:5:17:22 0/0:0:0:0:0:11:0%:22:1E0:39:11:7:4:11 0/0:0:0:0:0:16:0%:29:1E0:36:16:6:10:18 0/0:0:0:0:0:12:0%:21:1E0:35:12:3:9:14 0/0:0:0:0:0:10:0%:17:1E0:45:10:4:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:37:8:1:7:29:27.59%:26:2.2392E-3:36:21:6:15:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:37:12:2:10:13 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:17 0/0:0:0:0:0:21:0%:40:1E0:36:21:12:9:22 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:9 0/0:0:0:0:0:16:0%:29:1E0:34:16:8:8:18 0/0:0:0:0:0:14:0%:25:1E0:39:14:7:7:15 0/0:49:3:0:3:11:27.27%:7:1.0714E-1:36:8:3:5:11 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:11 0/0:0:0:0:0:9:0%:18:1E0:35:9:4:5:9 0/0:37:2:1:1:13:15.38%:13:2.4E-1:40:11:3:8:14 0/1:52:6:3:3:16:37.5%:20:8.837E-3:39:10:4:6:16 0/0:60:3:2:1:21:14.29%:19:1.1585E-1:39:18:5:13:22 0/0:0:0:0:0:11:0%:22:1E0:36:11:3:8:11 0/0:50:3:3:0:22:13.64%:19:1.1628E-1:40:19:5:14:24 0/0:0:0:0:0:7:0%:14:1E0:40:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:14 0/0:49:2:1:1:11:20%:7:2.3684E-1:39:8:4:4:11 0/0:0:0:0:0:13:0%:25:1E0:44:13:7:6:13 0/0:50:5:3:2:18:27.78%:8:2.2727E-2:36:13:3:10:18 0/1:36:6:4:2:16:37.5%:20:8.837E-3:36:10:2:8:17 0/0:0:0:0:0:9:0%:18:1E0:42:9:4:5:9 0/0:0:0:0:0:14:0%:25:1E0:39:14:6:8:14 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:16 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:17 0/0:0:0:0:0:10:0%:17:1E0:34:10:5:5:11 0/0:0:0:0:0:8:0%:14:1E0:38:8:3:5:9 0/1:41:7:4:3:21:33.33%:23:4.3101E-3:36:14:6:8:22 0/0:35:1:1:0:15:6.67%:21:5E-1:37:14:5:9:15 0/0:0:0:0:0:9:0%:18:1E0:41:9:5:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:34:12:3:9:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:1:10:11 0/0:33:3:0:3:11:27.27%:7:1.0714E-1:38:8:2:6:11 0/0:0:0:0:0:13:0%:25:1E0:40:13:5:8:13 0/0:0:0:0:0:11:0%:22:1E0:37:11:2:9:11 0/0:0:0:0:0:11:0%:22:1E0:38:11:4:7:11 0/0:0:0:0:0:24:0%:44:1E0:36:24:7:17:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:20:0%:36:1E0:36:20:5:15:21 0/0:34:2:1:1:11:18.18%:10:2.381E-1:36:9:2:7:11 0/0:0:0:0:0:12:0%:22:1E0:35:11:8:3:12 0/0:0:0:0:0:13:0%:25:1E0:35:13:4:9:13 0/0:0:0:0:0:15:0%:29:1E0:41:15:5:10:15 0/0:35:5:2:3:18:27.78%:8:2.2727E-2:37:13:1:12:19 0/0:37:3:3:0:14:21.43%:9:1.1111E-1:33:11:5:6:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:41:12:4:8:12 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:16 0/0:0:0:0:0:15:0%:29:1E0:36:15:4:11:17 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:25 0/0:0:0:0:0:22:0%:40:1E0:38:22:6:16:22 0/0:0:0:0:0:14:0%:25:1E0:38:14:6:8:15 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:19 0/0:0:0:0:0:10:0%:17:1E0:35:10:5:5:11 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:24 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:15 0/0:0:0:0:0:21:0%:40:1E0:37:21:5:16:21 0/0:0:0:0:0:10:0%:17:1E0:38:10:1:9:10 0/0:35:2:0:2:15:13.33%:16:2.4138E-1:37:13:5:8:18 0/0:31:1:0:1:11:9.09%:14:5E-1:36:10:4:6:13 0/0:49:2:1:1:11:18.18%:10:2.381E-1:39:9:2:7:12 0/0:37:6:4:2:24:25%:11:1.0968E-2:34:18:7:11:29 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:35:4:3:1:13:30.77%:6:4.7826E-2:36:9:2:7:14 0/0:0:0:0:0:11:0%:22:1E0:37:11:4:7:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:8 0/0:0:0:0:0:11:0%:22:1E0:37:11:3:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:37:12:3:9:12 0/0:0:0:0:0:11:0%:22:1E0:35:11:4:7:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:37:9:1:8:9 0/0:38:1:1:0:8:12.5%:8:5E-1:35:7:2:5:9 0/0:32:1:0:1:19:5.26%:28:5E-1:37:18:3:15:19 0/0:0:0:0:0:22:0%:40:1E0:35:22:5:17:22 0/0:0:0:0:0:18:0%:32:1E0:34:18:5:13:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:36:3:2:1:17:17.65%:14:1.1364E-1:37:14:2:12:19 0/0:0:0:0:0:8:0%:14:1E0:39:8:2:6:9 0/0:0:0:0:0:9:0%:18:1E0:36:9:3:6:10 0/0:38:5:3:2:13:38.46%:4:1.9565E-2:37:8:3:5:14 0/0:0:0:0:0:15:0%:29:1E0:37:15:5:10:15 0/0:0:0:0:0:7:0%:14:1E0:39:7:2:5:8 0/0:0:0:0:0:7:0%:14:1E0:39:7:2:5:7 0/0:37:3:1:2:12:25%:6:1.087E-1:35:9:3:6:12 0/0:37:4:1:3:21:19.05%:15:5.3471E-2:39:17:5:12:21 0/0:0:0:0:0:12:0%:21:1E0:40:12:2:10:14 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 MTB_anc 3949601 . G A . PASS AC=7;AF=0.028;AN=254;ANN=A|missense_variant|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.3808G>A|p.Ala1270Thr|3808/4470|3808/4470|1270/1489||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3949601G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3949601G>A||||||;HOM=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:11:0%:22:1E0:35:11:2:9:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:42:3:2:1:15:20%:11:1.1207E-1:35:12:3:9:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:9:0%:18:1E0:41:9:4:5:9 0/0:0:0:0:0:9:0%:18:1E0:37:9:5:4:9 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:0:1:11:9.09%:14:5E-1:36:10:2:8:12 0/0:0:0:0:0:11:0%:22:1E0:43:11:3:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:18:0%:32:1E0:37:18:5:13:18 0/0:0:0:0:0:16:0%:29:1E0:37:16:3:13:16 0/0:0:0:0:0:8:0%:14:1E0:36:8:2:6:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:38:1:1:0:7:14.29%:8:5E-1:41:6:1:5:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/0:0:0:0:0:10:0%:17:1E0:35:10:3:7:10 0/0:0:0:0:0:19:0%:37:1E0:35:19:7:12:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:39:9:3:6:9 0/0:0:0:0:0:21:0%:40:1E0:36:21:9:12:21 0/0:36:5:3:2:16:31.25%:6:2.1691E-2:36:11:3:8:16 0/0:0:0:0:0:10:0%:17:1E0:37:10:0:10:11 0/1:41:8:3:5:27:29.63%:26:2.1337E-3:40:19:7:12:28 0/0:0:0:0:0:13:0%:25:1E0:37:13:4:9:13 0/1:38:8:2:6:28:28.57%:26:2.188E-3:37:20:5:15:28 0/0:0:0:0:0:10:0%:17:1E0:37:10:4:6:10 0/0:0:0:0:0:13:0%:25:1E0:35:13:3:10:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:13 0/0:0:0:0:0:9:0%:18:1E0:42:9:2:7:9 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:20 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:17 0/0:0:0:0:0:27:0%:52:1E0:37:27:9:18:27 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:14 0/0:0:0:0:0:10:0%:17:1E0:38:10:7:3:10 0/0:0:0:0:0:12:0%:21:1E0:36:12:6:6:12 0/0:38:1:0:1:18:5.56%:24:5E-1:36:17:6:11:18 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 0/0:0:0:0:0:7:0%:14:1E0:35:7:3:4:7 0/0:41:5:1:4:24:20.83%:14:2.4823E-2:36:19:7:12:24 0/0:0:0:0:0:22:0%:40:1E0:36:22:5:17:22 0/0:0:0:0:0:11:0%:22:1E0:38:11:7:4:11 0/0:0:0:0:0:18:0%:32:1E0:36:18:7:11:18 0/0:0:0:0:0:13:0%:25:1E0:36:13:4:9:14 0/0:0:0:0:0:10:0%:17:1E0:44:10:4:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:38:7:1:6:29:24.14%:22:5.1909E-3:36:22:6:16:30 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:13:0%:25:1E0:36:13:2:11:13 0/0:0:0:0:0:12:0%:21:1E0:36:12:3:9:12 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:16 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:22 0/0:0:0:0:0:9:0%:18:1E0:36:9:1:8:9 0/0:0:0:0:0:17:0%:33:1E0:36:17:10:7:18 0/0:0:0:0:0:15:0%:29:1E0:39:15:8:7:15 0/0:50:3:0:3:10:30%:4:1.0526E-1:36:7:2:5:11 0/0:0:0:0:0:11:0%:22:1E0:37:11:5:6:11 0/0:0:0:0:0:9:0%:18:1E0:36:9:4:5:9 0/0:37:2:1:1:14:14.29%:12:2.4074E-1:40:12:4:8:14 0/1:54:6:3:3:15:40%:20:8.4291E-3:41:9:4:5:16 0/0:60:3:2:1:22:13.64%:19:1.1628E-1:40:19:5:14:22 0/0:0:0:0:0:9:0%:18:1E0:36:9:2:7:10 0/0:52:3:3:0:23:13.04%:22:1.1667E-1:40:20:5:15:24 0/0:0:0:0:0:7:0%:14:1E0:39:7:1:6:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 0/0:48:2:1:1:11:18.18%:10:2.381E-1:39:9:4:5:11 0/0:0:0:0:0:13:0%:25:1E0:43:13:7:6:13 0/0:50:5:3:2:18:27.78%:8:2.2727E-2:36:13:3:10:18 0/1:37:6:4:2:17:35.29%:20:9.2021E-3:35:11:3:8:17 0/0:0:0:0:0:8:0%:14:1E0:45:8:4:4:9 0/0:0:0:0:0:14:0%:25:1E0:40:14:6:8:14 0/0:0:0:0:0:16:0%:29:1E0:38:16:6:10:16 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:17 0/0:0:0:0:0:11:0%:22:1E0:34:11:5:6:11 0/0:0:0:0:0:9:0%:18:1E0:37:9:4:5:9 0/1:44:7:4:3:22:31.82%:23:4.4505E-3:36:15:6:9:22 0/0:0:0:0:0:13:0%:25:1E0:39:13:6:7:13 0/0:0:0:0:0:10:0%:17:1E0:41:10:6:4:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:34:12:2:10:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/0:0:0:0:0:11:0%:22:1E0:38:11:5:6:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:1:10:11 0/0:37:2:0:2:10:20%:7:2.3684E-1:38:8:2:6:11 0/0:0:0:0:0:13:0%:25:1E0:40:13:5:8:13 0/0:0:0:0:0:11:0%:22:1E0:38:11:2:9:11 0/0:0:0:0:0:11:0%:22:1E0:39:11:4:7:11 0/0:0:0:0:0:24:0%:44:1E0:35:24:8:16:25 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:21:0%:40:1E0:35:21:5:16:21 0/0:36:2:1:1:11:18.18%:10:2.381E-1:36:9:2:7:11 0/0:0:0:0:0:11:0%:22:1E0:35:11:8:3:12 0/0:0:0:0:0:13:0%:25:1E0:35:13:4:9:13 0/0:0:0:0:0:15:0%:29:1E0:41:15:5:10:15 0/0:36:4:2:2:18:22.22%:10:5.1948E-2:37:14:1:13:19 0/0:37:3:3:0:14:21.43%:9:1.1111E-1:32:11:5:6:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:12:0%:21:1E0:40:12:4:8:12 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:15 0/0:0:0:0:0:16:0%:29:1E0:36:16:5:11:17 0/0:0:0:0:0:25:0%:48:1E0:36:25:9:16:25 0/0:0:0:0:0:21:0%:40:1E0:37:21:6:15:22 0/0:0:0:0:0:14:0%:25:1E0:39:14:5:9:15 0/0:0:0:0:0:19:0%:37:1E0:37:19:10:9:19 0/0:0:0:0:0:12:0%:21:1E0:35:12:6:6:12 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:24 0/0:0:0:0:0:14:0%:25:1E0:36:14:4:10:15 0/0:0:0:0:0:19:0%:37:1E0:38:19:5:14:20 0/0:0:0:0:0:9:0%:18:1E0:39:9:1:8:9 0/0:33:3:1:2:17:17.65%:14:1.1364E-1:37:14:6:8:18 0/0:34:1:0:1:13:7.69%:18:5E-1:36:12:6:6:13 0/0:43:3:1:2:12:25%:6:1.087E-1:41:9:2:7:12 0/1:33:8:4:4:27:29.63%:26:2.1337E-3:36:19:9:10:28 0/0:0:0:0:0:16:0%:29:1E0:37:16:7:9:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:33:4:3:1:14:28.57%:6:4.8889E-2:35:10:3:7:14 0/0:0:0:0:0:12:0%:21:1E0:37:12:4:8:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/0:0:0:0:0:7:0%:14:1E0:36:7:3:4:8 0/0:0:0:0:0:14:0%:25:1E0:35:14:5:9:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:0:0:0:0:12:0%:21:1E0:35:12:3:9:12 0/0:32:1:0:1:13:7.69%:18:5E-1:33:12:5:7:13 0/0:0:0:0:0:7:0%:14:1E0:35:7:4:3:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:0:0:0:0:9:0%:18:1E0:38:9:1:8:9 0/0:38:1:1:0:8:12.5%:8:5E-1:36:7:2:5:9 0/0:37:1:0:1:19:5.26%:28:5E-1:37:18:3:15:19 0/0:0:0:0:0:22:0%:40:1E0:36:22:5:17:22 0/0:0:0:0:0:17:0%:33:1E0:35:17:5:12:18 0/0:0:0:0:0:7:0%:14:1E0:37:7:2:5:7 0/0:36:3:2:1:18:16.67%:14:1.1429E-1:36:15:3:12:18 0/0:0:0:0:0:8:0%:14:1E0:39:8:2:6:9 0/0:0:0:0:0:10:0%:17:1E0:35:10:4:6:10 0/0:39:5:3:2:14:35.71%:4:2.037E-2:36:9:4:5:14 0/0:0:0:0:0:14:0%:25:1E0:37:14:5:9:15 0/0:0:0:0:0:8:0%:14:1E0:40:8:2:6:8 0/0:0:0:0:0:7:0%:14:1E0:40:7:2:5:7 0/0:36:3:1:2:12:25%:6:1.087E-1:35:9:3:6:12 0/0:37:4:1:3:21:19.05%:15:5.3471E-2:38:17:5:12:21 0/0:0:0:0:0:14:0%:25:1E0:40:14:4:10:14 0/0:0:0:0:0:8:0%:14:1E0:35:8:2:6:8 MTB_anc 3949812 . ACGGCGGCACCGGCGGCAC A . PASS AC=49;AF=0.598;AN=82;ANN=A|disruptive_inframe_deletion|MODERATE|PE_PGRS57_Rv3514|gene3587|transcript|Transcript_gene3587|Coding|1/1|c.4046_4063delCCGGCGGCACCGGCGGCA|p.Thr1349_Gly1354del|4046/4470|4046/4470|1349/1489||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3949813_3949830delCGGCGGCACCGGCGGCAC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3949813_3949830delCGGCGGCACCGGCGGCAC||||||;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:11:3:8:16:68.75%:44:3.3854E-5:36:5:0:5:16 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:36:6:2:4:7:85.71%:26:2.331E-3:29:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:34:8:0:8:10:80%:34:3.5723E-4:36:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:37:6:1:5:7:85.71%:26:2.331E-3:32:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:7:0:7:8:87.5%:31:6.993E-4:33:1:0:1:8 1/1:33:8:0:8:9:100%:41:7.77E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:33:9:1:8:9:90%:42:5.9538E-5:33:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:1:7:10:80%:34:3.5723E-4:35:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:32:10:1:9:9:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:36:7:2:5:10:70%:28:1.548E-3:37:3:0:3:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 1/1:34:9:0:9:10:90%:42:5.9538E-5:38:1:0:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:6:1:5:14:42.86%:20:7.971E-3:37:8:0:8:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:29:11:1:10:9:91.67%:53:4.8074E-6:37:1:1:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 0/1:35:7:0:7:9:77.78%:29:1.1312E-3:36:2:0:2:10 0/1:34:8:1:7:10:80%:34:3.5723E-4:35:2:0:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:10:1:9:10:90.91%:47:1.7011E-5:38:1:0:1:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:6:2:4:9:66.67%:23:4.5249E-3:36:3:0:3:9 0/1:35:7:2:5:10:70%:28:1.548E-3:37:3:2:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:33:8:0:8:9:88.89%:36:2.0568E-4:34:1:0:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. 0/1:36:6:1:5:7:85.71%:26:2.331E-3:38:1:0:1:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:6:2:4:8:66.67%:23:4.5249E-3:36:3:0:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:31:7:2:5:10:63.64%:27:1.935E-3:36:4:2:2:11 0/1:32:7:0:7:8:87.5%:31:6.993E-4:38:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:32:6:0:6:8:66.67%:23:4.5249E-3:35:3:0:3:9 0/1:33:6:1:5:7:85.71%:26:2.331E-3:35:1:0:1:7 0/1:31:9:0:9:12:69.23%:36:2.2883E-4:35:4:0:4:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:30:6:0:6:8:66.67%:23:4.5249E-3:36:3:1:2:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:33:12:4:8:14:85.71%:58:1.3461E-6:38:1:0:1:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:34:13:3:10:17:76.47%:55:2.5647E-6:36:4:0:4:17 0/1:37:7:1:6:11:63.64%:27:1.935E-3:38:4:0:4:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:37:8:0:8:10:80%:34:3.5723E-4:36:2:1:1:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:35:9:0:9:11:81.82%:39:1.1057E-4:38:2:0:2:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 0/1:35:6:1:5:10:60%:22:5.418E-3:36:4:0:4:10 0/1:34:9:1:8:12:75%:37:1.6826E-4:38:3:1:2:12 0/0:37:4:0:4:10:40%:3:4.3344E-2:37:6:0:6:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 0/1:34:7:0:7:8:87.5%:31:6.993E-4:38:1:0:1:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 0/1:32:6:0:6:8:66.67%:23:4.5249E-3:36:3:0:3:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 0/1:34:7:1:6:9:77.78%:29:1.1312E-3:37:2:1:1:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 MTB_anc 3951429 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|fadD19_Rv3515c|gene3588|transcript|Transcript_gene3588|Coding|1/1|c.1042G>C|p.Ala348Pro|1042/1647|1042/1647|348/548||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3951429C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3951429C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:43:19:24:44:97.73%:99:1.5066E-25:0:0:0:0:45 1/1:48:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:65:35:30:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:48:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:23:12:11:24:100%:99:1.2146E-13:0:0:0:0:26 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:57:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:58:20:38:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:54:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:41:18:23:42:97.62%:99:2.3541E-24:0:0:0:0:44 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:50 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:37:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:78:30:48:78:100%:99:1.7165E-46:0:0:0:0:80 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:48:29:19:48:100%:99:1.554E-28:0:0:0:0:50 MTB_anc 3954155 . T G . PASS AC=18;AF=0.060;AN=300;ANN=G|missense_variant|MODERATE|Rv3517_Rv3517|gene3590|transcript|Transcript_gene3590|Coding|1/1|c.725T>G|p.Ile242Ser|725/840|725/840|242/279||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3954155T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3954155T>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:43:53:30:23:53 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:18 0/0:0:0:0:0:50:0%:92:1E0:49:50:22:28:51 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:27 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:31 0/0:0:0:0:0:36:0%:66:1E0:49:36:19:17:36 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:28 0/0:0:0:0:0:40:0%:74:1E0:47:40:18:22:40 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:50:0%:92:1E0:47:50:26:24:53 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:29 0/0:0:0:0:0:58:0%:99:1E0:43:58:30:28:58 0/0:0:0:0:0:25:0%:48:1E0:44:25:17:8:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:25 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:38 0/0:0:0:0:0:54:0%:99:1E0:45:54:36:18:55 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:47 0/0:0:0:0:0:32:0%:59:1E0:48:32:12:20:32 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:21 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:35 0/0:38:1:1:0:24:4.17%:34:5E-1:43:23:10:13:25 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:47:32:19:13:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:0:0:0:0:60:0%:99:1E0:47:60:37:23:60 0/0:0:0:0:0:43:0%:82:1E0:47:43:24:19:43 0/0:0:0:0:0:36:0%:66:1E0:50:36:23:13:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:34 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:41 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 1/1:42:30:15:15:31:96.77%:99:6.8754E-17:39:1:0:1:31 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:38 0/0:0:0:0:0:21:0%:40:1E0:43:21:9:12:22 0/0:0:0:0:0:40:0%:74:1E0:46:40:19:21:41 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:48 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:43 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:29 0/0:0:0:0:0:24:0%:44:1E0:42:24:17:7:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:51:0%:97:1E0:42:51:29:22:52 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:43 0/0:0:0:0:0:42:0%:77:1E0:50:42:22:20:42 0/0:0:0:0:0:43:0%:82:1E0:47:43:26:17:45 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:39 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:42 0/0:0:0:0:0:69:0%:99:1E0:45:69:37:32:69 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:22 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:14:6:20 0/0:0:0:0:0:43:0%:82:1E0:48:43:20:23:44 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:33 0/0:0:0:0:0:31:0%:59:1E0:49:31:14:17:31 0/0:0:0:0:0:30:0%:55:1E0:48:30:15:15:30 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:44:0%:81:1E0:42:44:27:17:45 0/0:0:0:0:0:31:0%:59:1E0:48:31:20:11:31 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:26 0/0:0:0:0:0:50:0%:92:1E0:41:50:31:19:50 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:30 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:27 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:29:0%:55:1E0:49:29:15:14:31 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:47:35:24:11:35 0/0:0:0:0:0:27:0%:52:1E0:49:27:13:14:28 0/0:0:0:0:0:53:0%:99:1E0:42:53:30:23:53 0/0:0:0:0:0:41:0%:78:1E0:46:41:27:14:41 0/0:0:0:0:0:60:0%:99:1E0:41:60:37:23:61 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 0/0:0:0:0:0:16:0%:29:1E0:49:16:7:9:18 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:31 0/0:0:0:0:0:43:0%:82:1E0:43:43:27:16:43 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:39 0/0:0:0:0:0:46:0%:85:1E0:42:46:30:16:48 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:22:10:33 0/0:0:0:0:0:59:0%:99:1E0:43:59:27:32:60 0/0:0:0:0:0:65:0%:99:1E0:44:65:38:27:66 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:48 0/0:0:0:0:0:39:0%:74:1E0:42:39:28:11:41 0/0:0:0:0:0:56:0%:99:1E0:44:56:34:22:57 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:43 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:45 0/0:0:0:0:0:46:0%:85:1E0:43:46:27:19:46 0/0:0:0:0:0:52:0%:96:1E0:40:52:24:28:56 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:42 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:43 0/0:0:0:0:0:70:0%:99:1E0:41:70:37:33:71 0/0:0:0:0:0:50:0%:92:1E0:45:50:28:22:51 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:41 1/1:41:48:26:22:49:97.96%:99:1.9625E-27:60:1:1:0:49 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:40 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:35 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:32 0/0:0:0:0:0:58:0%:99:1E0:42:58:39:19:58 0/0:0:0:0:0:13:0%:25:1E0:42:13:7:6:13 1/1:44:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 0/0:0:0:0:0:52:0%:96:1E0:44:52:30:22:55 0/0:0:0:0:0:43:0%:82:1E0:44:43:29:14:43 MTB_anc 3956228 . G C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv3519_Rv3519|gene3592|transcript|Transcript_gene3592|Coding|1/1|c.679G>C|p.Glu227Gln|679/711|679/711|227/236||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3956228G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3956228G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:0:0:0:0:20:0%:36:1E0:50:20:10:10:20 0/0:0:0:0:0:70:0%:99:1E0:46:70:37:33:70 0/0:51:1:1:0:28:3.57%:41:5E-1:47:27:13:14:28 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:0:26:0%:47:1E0:49:26:18:8:26 0/0:0:0:0:0:30:0%:55:1E0:54:30:15:15:30 0/0:0:0:0:0:30:0%:55:1E0:49:30:14:16:30 0/0:0:0:0:0:29:0%:55:1E0:50:29:17:12:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:23:13:36 0/0:0:0:0:0:12:0%:21:1E0:50:12:6:6:12 0/0:0:0:0:0:47:0%:89:1E0:47:47:23:24:47 0/0:0:0:0:0:26:0%:47:1E0:45:26:6:20:26 0/0:0:0:0:0:19:0%:37:1E0:46:19:16:3:20 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:17 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:48:0%:89:1E0:45:48:26:22:48 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:40:0%:74:1E0:48:40:23:17:40 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:37:1:1:0:14:7.14%:17:5E-1:43:13:9:4:14 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:35 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:50:34:18:16:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:26 0/0:0:0:0:0:37:0%:70:1E0:49:37:24:13:37 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:54:0%:99:1E0:46:54:32:22:54 0/0:0:0:0:0:49:0%:93:1E0:47:49:27:22:50 0/0:60:1:0:1:52:1.92%:83:5E-1:46:51:29:22:53 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:37 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:41 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:42:0%:77:1E0:45:42:16:26:42 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:33 0/0:0:0:0:0:22:0%:40:1E0:49:22:14:8:22 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:44 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:26:0%:47:1E0:48:26:19:7:28 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:41:0%:78:1E0:41:41:26:15:41 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:41 0/0:0:0:0:0:30:0%:55:1E0:51:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:46:0%:85:1E0:44:46:30:16:46 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:41:0%:78:1E0:47:41:24:17:42 0/0:0:0:0:0:47:0%:89:1E0:47:47:27:20:47 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:45:0%:85:1E0:47:45:26:19:45 0/0:0:0:0:0:19:0%:37:1E0:51:19:12:7:19 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:45:0%:85:1E0:47:45:22:23:45 0/0:0:0:0:0:35:0%:67:1E0:51:35:22:13:35 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:40:0%:74:1E0:49:40:18:22:40 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:31 0/0:37:1:0:1:45:2.22%:73:5E-1:44:44:26:18:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:48:30:8:22:30 0/0:0:0:0:0:41:0%:78:1E0:40:41:16:25:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:21:0%:40:1E0:50:21:8:13:21 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:21 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:25 0/0:0:0:0:0:40:0%:74:1E0:50:40:22:18:40 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:18 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:39 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:26 0/0:0:0:0:0:57:0%:99:1E0:45:57:28:29:58 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:20:10:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:25:15:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:48:33:22:11:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:25 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:37:1:1:0:26:3.85%:38:5E-1:45:25:13:12:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:38 0/0:0:0:0:0:19:0%:37:1E0:45:19:6:13:20 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:40 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:42 0/0:0:0:0:0:32:0%:59:1E0:38:32:22:10:35 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:25 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:57:0%:99:1E0:42:57:28:29:57 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:23 1/1:40:25:15:10:26:96.15%:99:5.4444E-14:60:1:0:1:26 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:50 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:45:0%:85:1E0:40:45:28:17:47 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:17:24:43 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:36 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:42 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:39 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:44:0%:81:1E0:39:44:19:25:44 0/0:0:0:0:0:45:0%:85:1E0:44:45:27:18:46 0/0:0:0:0:0:37:0%:70:1E0:44:37:22:15:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:43 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:29 0/0:0:0:0:0:43:0%:82:1E0:43:43:15:28:44 0/0:0:0:0:0:54:0%:99:1E0:43:54:32:22:54 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:39 MTB_anc 3959694 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|ltp3_Rv3523|gene3596|transcript|Transcript_gene3596|Coding|1/1|c.166C>T|p.Pro56Ser|166/1185|166/1185|56/394||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3959694C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3959694C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:20:29:49 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:42:0%:77:1E0:45:42:25:17:43 0/0:0:0:0:0:22:0%:40:1E0:39:22:13:9:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:23:0%:44:1E0:43:23:7:16:25 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:31 0/0:0:0:0:0:16:0%:29:1E0:50:16:7:9:17 0/0:0:0:0:0:36:0%:66:1E0:47:36:18:18:36 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:37 0/0:0:0:0:0:9:0%:18:1E0:48:9:5:4:9 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:48 0/0:0:0:0:0:26:0%:47:1E0:41:26:17:9:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:17:0%:33:1E0:43:17:9:8:17 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:26 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:21 0/0:0:0:0:0:51:0%:97:1E0:43:51:30:21:51 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:18:0%:32:1E0:46:18:5:13:18 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:40 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:12:20:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:8:16:24 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:33 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:47:0%:89:1E0:46:47:23:24:47 0/0:0:0:0:0:52:0%:96:1E0:40:52:29:23:54 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:17 0/0:0:0:0:0:22:0%:40:1E0:43:22:5:17:22 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:41 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:17:6:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:45 0/0:0:0:0:0:33:0%:63:1E0:39:33:16:17:33 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:19 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:25:0%:48:1E0:39:25:18:7:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 0/0:0:0:0:0:59:0%:99:1E0:41:59:26:33:59 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:23 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:43 0/0:0:0:0:0:13:0%:25:1E0:48:13:6:7:13 0/0:0:0:0:0:20:0%:36:1E0:50:20:6:14:20 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:42 0/0:0:0:0:0:38:0%:70:1E0:46:38:12:26:38 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:60:1:0:1:44:2.27%:69:5E-1:41:43:21:22:44 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:23 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:21:0%:40:1E0:41:21:6:15:21 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:26:12:39 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:40 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:18 0/0:0:0:0:0:19:0%:37:1E0:47:19:14:5:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:50 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:31 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:48 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:29 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:34:0%:62:1E0:38:34:20:14:35 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:36 0/0:0:0:0:0:32:0%:59:1E0:39:32:21:11:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:31 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:16 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:32 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:28 0/0:0:0:0:0:42:0%:77:1E0:43:42:20:22:43 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:21:0%:40:1E0:40:21:14:7:21 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:37 0/0:0:0:0:0:43:0%:82:1E0:37:43:24:19:43 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:34 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:41 0/0:0:0:0:0:31:0%:59:1E0:37:31:18:13:32 0/0:0:0:0:0:63:0%:99:1E0:39:63:41:22:64 0/0:0:0:0:0:56:0%:99:1E0:40:56:26:30:59 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:20 0/0:0:0:0:0:45:0%:85:1E0:36:45:31:14:49 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:34 0/0:0:0:0:0:60:0%:99:1E0:37:60:39:21:61 0/0:0:0:0:0:43:0%:82:1E0:37:43:25:18:46 0/0:0:0:0:0:45:0%:85:1E0:37:45:26:19:45 0/0:0:0:0:0:41:0%:78:1E0:38:41:27:14:41 0/0:0:0:0:0:34:0%:62:1E0:38:34:20:14:34 0/0:0:0:0:0:39:0%:74:1E0:38:39:22:17:39 0/0:0:0:0:0:47:0%:89:1E0:38:47:23:24:50 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:28 0/0:0:0:0:0:38:0%:70:1E0:38:38:21:17:39 0/0:0:0:0:0:32:0%:59:1E0:37:32:21:11:36 0/0:0:0:0:0:43:0%:82:1E0:39:43:21:22:44 0/0:0:0:0:0:39:0%:74:1E0:38:39:19:20:40 0/0:0:0:0:0:42:0%:77:1E0:41:42:26:16:43 0/0:0:0:0:0:33:0%:63:1E0:41:33:22:11:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:39 0/0:0:0:0:0:40:0%:74:1E0:39:40:24:16:40 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:32 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:40 0/0:0:0:0:0:38:0%:70:1E0:39:38:14:24:38 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:38 MTB_anc 3959957 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|stop_gained|HIGH|ltp3_Rv3523|gene3596|transcript|Transcript_gene3596|Coding|1/1|c.429C>A|p.Tyr143*|429/1185|429/1185|143/394||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3959957C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.3959957C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:51:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:32:18:14:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:29:17:12:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:42:18:24:43:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:52:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:53:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:40:64:38:26:64:100%:99:4.1752E-38:0:0:0:0:68 1/1:41:49:17:32:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:38:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:37:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 3970504 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PPE61_Rv3532|gene3605|transcript|Transcript_gene3605|Coding|1/1|c.1162G>A|p.Val388Met|1162/1221|1162/1221|388/406||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3970504G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3970504G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:60:25:35:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:50:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:58:18:40:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:50:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:42:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:45:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 MTB_anc 3971896 . G A . PASS AC=123;AF=0.410;AN=300;ANN=A|synonymous_variant|LOW|PPE62_Rv3533c|gene3606|transcript|Transcript_gene3606|Coding|1/1|c.558C>T|p.Ala186Ala|558/1749|558/1749|186/582||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3971896G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.3971896G>A||||||;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:49 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 0/0:0:0:0:0:24:0%:44:1E0:41:24:7:17:24 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:27 1/1:47:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:21 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:20 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:52:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:12:0%:21:1E0:46:12:6:6:13 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:26 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:11:0%:22:1E0:47:11:4:7:11 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:22:0%:40:1E0:47:22:10:12:22 1/1:43:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:16:0%:29:1E0:45:16:6:10:16 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 0/0:0:0:0:0:28:0%:51:1E0:49:28:16:12:29 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:39 0/0:60:1:0:1:26:3.85%:38:5E-1:48:25:13:12:26 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 1/1:45:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:64 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 1/1:45:30:17:13:31:96.77%:99:6.8754E-17:38:1:0:1:33 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:40 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:29 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 0/0:0:0:0:0:39:0%:74:1E0:41:39:14:25:43 1/1:51:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:30:15:15:31:96.77%:99:6.8754E-17:39:1:1:0:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:11:18:29 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:33 0/0:0:0:0:0:49:0%:93:1E0:47:49:22:27:49 0/0:0:0:0:0:51:0%:97:1E0:46:51:29:22:56 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:23 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 1/1:51:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:48:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:31 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 0/0:0:0:0:0:36:0%:66:1E0:49:36:13:23:37 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:48 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 0/0:38:1:0:1:47:2.13%:77:5E-1:43:46:22:24:49 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:24:0%:44:1E0:40:24:7:17:24 0/1:49:7:1:6:8:87.5%:31:6.993E-4:60:1:1:0:8 0/0:0:0:0:0:36:0%:66:1E0:42:36:13:23:37 1/1:48:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:29 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:41:10:31:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:20:0%:36:1E0:42:20:9:11:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:39:0%:74:1E0:40:39:12:27:41 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:27 0/0:0:0:0:0:17:0%:33:1E0:38:17:4:13:17 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:37 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:13:25:40 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:25 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:24 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:48 0/0:0:0:0:0:32:0%:59:1E0:40:32:11:21:33 0/0:0:0:0:0:47:0%:89:1E0:40:47:15:32:49 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:28 0/0:0:0:0:0:44:0%:81:1E0:40:44:12:32:44 0/0:0:0:0:0:51:0%:97:1E0:42:51:21:30:51 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:54:0%:99:1E0:39:54:18:36:54 0/0:0:0:0:0:26:0%:47:1E0:39:26:7:19:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:32 0/0:0:0:0:0:42:0%:77:1E0:39:42:20:22:45 0/0:0:0:0:0:44:0%:81:1E0:41:44:14:30:44 0/0:0:0:0:0:28:0%:51:1E0:38:28:8:20:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:10:32:43 0/0:0:0:0:0:23:0%:44:1E0:38:23:6:17:24 0/0:0:0:0:0:40:0%:74:1E0:39:40:16:24:41 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:31 0/0:0:0:0:0:31:0%:59:1E0:37:31:12:19:32 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 1/1:41:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 0/0:0:0:0:0:45:0%:85:1E0:42:45:17:28:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:28 0/0:0:0:0:0:20:0%:36:1E0:43:20:6:14:20 0/0:0:0:0:0:43:0%:82:1E0:41:43:19:24:43 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:12:19:33 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:23 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:34 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:44 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 MTB_anc 3973639 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|hsaG_Rv3535c|gene3608|transcript|Transcript_gene3608|Coding|1/1|c.862G>T|p.Val288Leu|862/912|862/912|288/303||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3973639C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3973639C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:23:0%:44:1E0:51:23:11:12:23 0/0:0:0:0:0:50:0%:92:1E0:46:50:30:20:50 0/0:0:0:0:0:24:0%:44:1E0:53:24:9:15:25 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:20 0/0:0:0:0:0:28:0%:51:1E0:47:28:9:19:29 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:38 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:28 0/0:0:0:0:0:41:0%:78:1E0:46:41:24:17:42 0/0:0:0:0:0:24:0%:44:1E0:51:24:12:12:24 0/0:0:0:0:0:47:0%:89:1E0:49:47:28:19:48 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:20:0%:36:1E0:41:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:48:26:14:12:27 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:19 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:55:0%:99:1E0:44:55:29:26:55 0/0:0:0:0:0:24:0%:44:1E0:52:24:10:14:24 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:0:0:0:0:17:0%:33:1E0:44:17:13:4:17 0/0:0:0:0:0:35:0%:67:1E0:45:35:13:22:35 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:21 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:38 0/0:0:0:0:0:25:0%:48:1E0:43:25:16:9:25 0/0:0:0:0:0:25:0%:48:1E0:53:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:18:10:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:54:0%:99:1E0:47:54:29:25:56 0/0:0:0:0:0:48:0%:89:1E0:47:48:27:21:48 0/0:0:0:0:0:48:0%:89:1E0:47:48:24:24:49 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:15:0%:29:1E0:48:15:8:7:15 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:25 0/0:0:0:0:0:50:0%:92:1E0:44:50:28:22:50 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:25:0%:48:1E0:48:25:15:10:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:15 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:58:0%:99:1E0:45:58:33:25:58 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:20 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:44 0/0:0:0:0:0:49:0%:93:1E0:50:49:24:25:49 0/0:0:0:0:0:27:0%:52:1E0:44:27:9:18:27 0/0:0:0:0:0:46:0%:85:1E0:44:46:25:21:46 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:62:0%:99:1E0:47:62:31:31:62 0/0:0:0:0:0:65:0%:99:1E0:48:65:38:27:65 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:14:0%:25:1E0:50:14:10:4:14 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:46:38:13:25:38 0/0:0:0:0:0:28:0%:51:1E0:50:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:53:24:11:13:24 0/0:38:1:1:0:37:2.7%:59:5E-1:49:36:22:14:37 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:53:25:10:15:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:18:0%:32:1E0:42:18:14:4:18 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:34 0/0:0:0:0:0:19:0%:37:1E0:52:19:7:12:19 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:26 0/0:0:0:0:0:20:0%:36:1E0:47:20:5:15:21 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:27:0%:52:1E0:48:27:20:7:27 0/0:0:0:0:0:30:0%:55:1E0:50:30:7:23:30 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:50:0%:92:1E0:42:50:21:29:50 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:27 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:53:23:13:10:24 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:32 0/0:0:0:0:0:27:0%:52:1E0:47:27:17:10:28 0/0:0:0:0:0:43:0%:82:1E0:48:43:22:21:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:22 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:30:0%:55:1E0:45:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:48:35:17:18:35 0/0:39:1:1:0:41:2.44%:66:5E-1:47:40:22:18:42 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:35 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:41 0/0:0:0:0:0:46:0%:85:1E0:46:46:21:25:47 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:30 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:48 0/0:0:0:0:0:50:0%:92:1E0:41:50:29:21:52 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:50:0%:92:1E0:43:50:29:21:53 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:51:0%:97:1E0:43:51:32:19:51 0/0:0:0:0:0:46:0%:85:1E0:39:46:27:19:47 0/0:0:0:0:0:44:0%:81:1E0:40:44:27:17:44 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:22:12:34 0/0:0:0:0:0:49:0%:93:1E0:41:49:27:22:50 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:41 0/0:0:0:0:0:51:0%:97:1E0:41:51:21:30:52 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:78:0%:99:1E0:40:78:46:32:81 0/0:0:0:0:0:40:0%:74:1E0:46:40:18:22:40 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:38 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:8:22:30 0/0:0:0:0:0:52:0%:96:1E0:44:52:28:24:52 0/0:0:0:0:0:49:0%:93:1E0:45:49:23:26:49 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:39 MTB_anc 3973994 . C T . PASS AC=16;AF=0.053;AN=300;ANN=T|synonymous_variant|LOW|hsaG_Rv3535c|gene3608|transcript|Transcript_gene3608|Coding|1/1|c.507G>A|p.Glu169Glu|507/912|507/912|169/303||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3973994C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3973994C>T||||||;HET=0;NC=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:37:42:8:34:42 0/0:0:0:0:0:15:0%:29:1E0:40:15:4:11:15 0/0:0:0:0:0:45:0%:85:1E0:38:45:6:39:45 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:18:0%:32:1E0:40:18:7:11:18 0/0:0:0:0:0:25:0%:48:1E0:35:25:2:23:25 0/0:0:0:0:0:27:0%:52:1E0:41:27:4:23:27 0/0:0:0:0:0:18:0%:32:1E0:39:18:4:14:19 0/0:0:0:0:0:24:0%:44:1E0:41:24:5:19:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:1:22:23 0/0:0:0:0:0:26:0%:47:1E0:39:26:5:21:27 0/0:0:0:0:0:25:0%:48:1E0:37:25:4:21:28 0/0:0:0:0:0:15:0%:29:1E0:35:15:3:12:17 0/0:0:0:0:0:34:0%:62:1E0:37:34:5:29:34 0/0:0:0:0:0:22:0%:40:1E0:38:22:8:14:23 0/0:0:0:0:0:30:0%:55:1E0:38:30:7:23:30 0/0:0:0:0:0:27:0%:52:1E0:38:27:2:25:27 0/0:0:0:0:0:16:0%:29:1E0:38:16:4:12:17 0/0:0:0:0:0:18:0%:32:1E0:39:18:4:14:18 0/0:0:0:0:0:33:0%:63:1E0:39:33:10:23:33 0/0:0:0:0:0:26:0%:47:1E0:37:26:6:20:28 0/0:0:0:0:0:36:0%:66:1E0:37:36:6:30:37 0/0:0:0:0:0:20:0%:36:1E0:40:20:2:18:20 0/0:0:0:0:0:22:0%:40:1E0:37:22:2:20:22 0/0:0:0:0:0:23:0%:44:1E0:37:23:4:19:23 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:15 0/0:0:0:0:0:35:0%:67:1E0:36:35:8:27:36 0/0:0:0:0:0:16:0%:29:1E0:41:16:4:12:16 0/0:0:0:0:0:30:0%:55:1E0:39:30:10:20:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:8:22:30 0/0:0:0:0:0:30:0%:55:1E0:39:30:7:23:30 0/0:0:0:0:0:20:0%:36:1E0:37:20:4:16:20 0/0:0:0:0:0:34:0%:62:1E0:38:34:7:27:36 0/0:0:0:0:0:21:0%:40:1E0:38:21:6:15:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:37:0%:70:1E0:36:37:11:26:37 0/0:0:0:0:0:26:0%:47:1E0:40:26:9:17:27 0/0:0:0:0:0:49:0%:93:1E0:39:49:10:39:50 0/0:0:0:0:0:40:0%:74:1E0:36:40:5:35:40 0/0:0:0:0:0:30:0%:55:1E0:37:30:6:24:30 0/0:0:0:0:0:34:0%:62:1E0:38:34:6:28:34 0/0:0:0:0:0:42:0%:77:1E0:38:42:7:35:42 0/0:0:0:0:0:19:0%:37:1E0:36:19:4:15:19 0/0:0:0:0:0:19:0%:37:1E0:36:19:3:16:20 0/0:0:0:0:0:35:0%:67:1E0:37:35:8:27:35 0/0:36:1:0:1:25:4%:38:5E-1:38:24:6:18:25 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:22 0/0:0:0:0:0:31:0%:59:1E0:39:31:5:26:31 0/0:0:0:0:0:35:0%:67:1E0:38:35:6:29:35 0/0:0:0:0:0:33:0%:63:1E0:38:33:6:27:33 0/0:0:0:0:0:24:0%:44:1E0:37:24:3:21:24 0/0:0:0:0:0:31:0%:59:1E0:38:31:10:21:31 0/0:0:0:0:0:20:0%:36:1E0:39:20:6:14:20 0/0:0:0:0:0:31:0%:59:1E0:39:31:6:25:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:11:20:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:9:27:37 0/0:0:0:0:0:24:0%:44:1E0:36:24:6:18:24 0/0:0:0:0:0:17:0%:33:1E0:40:17:4:13:18 0/0:0:0:0:0:38:0%:70:1E0:40:38:10:28:39 0/0:0:0:0:0:26:0%:47:1E0:36:26:3:23:26 0/0:0:0:0:0:32:0%:59:1E0:38:32:4:28:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:7:20:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:6:27:33 0/0:38:1:0:1:20:5%:27:5E-1:38:19:2:17:20 0/0:0:0:0:0:28:0%:51:1E0:38:28:6:22:29 0/0:0:0:0:0:45:0%:85:1E0:38:45:11:34:46 0/0:0:0:0:0:20:0%:36:1E0:41:20:6:14:20 0/0:0:0:0:0:32:0%:59:1E0:38:32:8:24:32 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:21 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:32:0%:59:1E0:40:32:7:25:33 0/0:0:0:0:0:18:0%:32:1E0:38:18:2:16:19 0/0:0:0:0:0:28:0%:51:1E0:40:28:7:21:28 0/0:0:0:0:0:25:0%:48:1E0:42:25:7:18:25 0/0:0:0:0:0:39:0%:74:1E0:38:39:7:32:39 0/0:0:0:0:0:28:0%:51:1E0:39:28:9:19:29 0/0:0:0:0:0:23:0%:44:1E0:37:23:6:17:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:3:23:26 0/0:0:0:0:0:30:0%:55:1E0:37:30:8:22:30 0/0:0:0:0:0:28:0%:51:1E0:37:28:8:20:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:3:22:25 0/0:0:0:0:0:35:0%:67:1E0:38:35:11:24:35 0/0:0:0:0:0:28:0%:51:1E0:38:28:6:22:28 0/0:0:0:0:0:16:0%:29:1E0:39:16:1:15:16 0/0:0:0:0:0:36:0%:66:1E0:39:36:9:27:37 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:26 0/0:0:0:0:0:29:0%:55:1E0:36:29:3:26:29 0/0:0:0:0:0:17:0%:33:1E0:41:17:5:12:17 0/0:0:0:0:0:29:0%:55:1E0:41:29:7:22:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:5:26:31 0/0:0:0:0:0:25:0%:48:1E0:38:25:3:22:25 0/0:0:0:0:0:22:0%:40:1E0:40:22:2:20:22 0/0:0:0:0:0:35:0%:67:1E0:36:35:12:23:35 0/0:0:0:0:0:28:0%:51:1E0:37:28:2:26:28 0/0:0:0:0:0:45:0%:85:1E0:37:45:13:32:45 0/0:0:0:0:0:22:0%:40:1E0:38:22:6:16:22 0/0:0:0:0:0:26:0%:47:1E0:36:26:3:23:26 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:37:32:8:24:32 0/0:0:0:0:0:34:0%:62:1E0:37:34:4:30:34 0/0:0:0:0:0:24:0%:44:1E0:40:24:7:17:24 0/0:0:0:0:0:36:0%:66:1E0:37:36:9:27:36 0/0:0:0:0:0:26:0%:47:1E0:38:26:5:21:27 0/0:0:0:0:0:27:0%:52:1E0:36:27:7:20:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:4:19:24 0/0:0:0:0:0:27:0%:52:1E0:40:27:6:21:27 0/0:0:0:0:0:21:0%:40:1E0:39:21:4:17:21 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:27 1/1:37:33:4:29:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:24 0/0:0:0:0:0:17:0%:33:1E0:36:17:2:15:17 1/1:36:29:1:28:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:34:0%:62:1E0:37:34:8:26:34 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:28 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:25 0/0:0:0:0:0:25:0%:48:1E0:38:25:4:21:25 0/0:0:0:0:0:23:0%:44:1E0:35:23:0:23:23 0/0:0:0:0:0:44:0%:81:1E0:37:44:8:36:44 0/0:0:0:0:0:42:0%:77:1E0:36:42:11:31:42 1/1:37:24:7:17:25:96%:99:2.0568E-13:38:1:0:1:25 0/0:0:0:0:0:27:0%:52:1E0:36:27:2:25:27 0/0:0:0:0:0:51:0%:97:1E0:36:51:11:40:52 0/0:0:0:0:0:29:0%:55:1E0:36:29:4:25:29 0/0:0:0:0:0:35:0%:67:1E0:36:35:5:30:35 0/0:0:0:0:0:27:0%:52:1E0:36:27:10:17:27 0/0:0:0:0:0:40:0%:74:1E0:37:40:8:32:40 1/1:38:25:0:25:25:100%:99:7.9107E-15:0:0:0:0:28 0/0:0:0:0:0:36:0%:66:1E0:37:36:9:27:37 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 0/0:0:0:0:0:39:0%:74:1E0:36:39:12:27:42 0/0:0:0:0:0:30:0%:55:1E0:37:30:6:24:30 0/0:0:0:0:0:38:0%:70:1E0:34:38:6:32:38 0/0:0:0:0:0:20:0%:36:1E0:35:20:3:17:21 0/0:0:0:0:0:31:0%:59:1E0:36:31:6:25:31 0/0:0:0:0:0:49:0%:93:1E0:37:49:9:40:50 0/0:0:0:0:0:20:0%:36:1E0:37:20:3:17:20 0/0:0:0:0:0:31:0%:59:1E0:37:31:4:27:31 0/0:0:0:0:0:30:0%:55:1E0:36:30:6:24:30 0/0:0:0:0:0:29:0%:55:1E0:37:29:5:24:30 0/0:0:0:0:0:31:0%:59:1E0:38:31:5:26:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:6:22:28 0/0:0:0:0:0:30:0%:55:1E0:38:30:5:25:30 0/0:0:0:0:0:25:0%:48:1E0:38:25:7:18:25 0/0:0:0:0:0:17:0%:33:1E0:37:17:5:12:18 0/0:0:0:0:0:32:0%:59:1E0:38:32:5:27:32 0/0:0:0:0:0:41:0%:78:1E0:37:41:6:35:42 0/0:0:0:0:0:40:0%:74:1E0:39:40:11:29:40 0/0:0:0:0:0:32:0%:59:1E0:38:32:7:25:33 MTB_anc 3974930 . T C . PASS AC=4;AF=0.013;AN=300;ANN=C|missense_variant|MODERATE|hsaE_Rv3536c|gene3609|transcript|Transcript_gene3609|Coding|1/1|c.367A>G|p.Thr123Ala|367/786|367/786|123/261||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3974930T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3974930T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:38 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:15 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:38 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:40:0%:74:1E0:50:40:19:21:40 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:49:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:15:0%:29:1E0:50:15:8:7:15 0/0:0:0:0:0:53:0%:99:1E0:47:53:25:28:54 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:22 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:25 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:18 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:44 0/0:0:0:0:0:22:0%:40:1E0:53:22:10:12:22 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:15:0%:29:1E0:49:15:7:8:16 0/0:0:0:0:0:21:0%:40:1E0:44:21:17:4:22 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:24 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:38 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:60:0%:99:1E0:47:60:28:32:60 0/0:0:0:0:0:47:0%:89:1E0:48:47:17:30:47 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:46 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:19 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:34 0/0:0:0:0:0:48:0%:89:1E0:45:48:21:27:48 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:23:14:38 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:37 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:32 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:44:25:7:18:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:25:0%:48:1E0:50:25:14:11:26 0/0:0:0:0:0:37:0%:70:1E0:41:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:48:35:13:22:35 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:40:0%:74:1E0:48:40:18:22:40 0/0:0:0:0:0:51:0%:97:1E0:49:51:24:27:51 0/0:0:0:0:0:24:0%:44:1E0:48:24:18:6:24 0/0:0:0:0:0:46:0%:85:1E0:47:46:22:24:47 0/0:0:0:0:0:17:0%:33:1E0:50:17:7:10:17 0/0:0:0:0:0:28:0%:51:1E0:49:28:8:20:28 0/0:0:0:0:0:17:0%:33:1E0:48:17:11:6:19 0/0:0:0:0:0:20:0%:36:1E0:53:20:10:10:20 0/0:0:0:0:0:18:0%:32:1E0:50:18:7:11:18 0/0:0:0:0:0:35:0%:67:1E0:50:35:12:23:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:24:11:37 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:36 0/0:0:0:0:0:42:0%:77:1E0:46:42:28:14:44 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:28 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:42 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:22:0%:40:1E0:50:22:12:10:22 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:51:21:17:4:22 0/0:0:0:0:0:49:0%:93:1E0:39:49:28:21:49 0/0:0:0:0:0:25:0%:48:1E0:46:25:16:9:25 0/0:0:0:0:0:51:0%:97:1E0:44:51:27:24:53 0/0:0:0:0:0:20:0%:36:1E0:44:20:13:7:20 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:23 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:24 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:20:14:36 0/0:0:0:0:0:51:0%:97:1E0:43:51:26:25:51 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:38 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 1/1:41:35:16:19:36:97.22%:99:8.3613E-20:38:1:1:0:36 1/1:41:60:30:30:61:98.36%:99:1.6176E-34:24:1:1:0:61 0/0:0:0:0:0:56:0%:99:1E0:44:56:30:26:56 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:35 0/0:0:0:0:0:20:0%:36:1E0:43:20:12:8:21 0/0:0:0:0:0:47:0%:89:1E0:38:47:24:23:50 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:34 0/0:0:0:0:0:40:0%:74:1E0:42:40:14:26:42 0/0:0:0:0:0:34:0%:62:1E0:36:34:14:20:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:21:13:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:26 0/0:0:0:0:0:54:0%:99:1E0:40:54:31:23:55 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:9:21:31 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:49 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:42 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:34 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:15 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:32:1:1:0:47:2.13%:77:5E-1:45:46:20:26:47 0/0:0:0:0:0:61:0%:99:1E0:40:61:27:34:62 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 MTB_anc 3975488 . C T . PASS AC=16;AF=0.053;AN=300;ANN=T|synonymous_variant|LOW|kstD_Rv3537|gene3610|transcript|Transcript_gene3610|Coding|1/1|c.120C>T|p.Tyr40Tyr|120/1692|120/1692|40/563||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3975488C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3975488C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3975488C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:44 0/0:0:0:0:0:15:0%:29:1E0:52:15:7:8:16 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:45 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:19:0%:37:1E0:44:19:8:11:19 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:9:22:31 0/0:0:0:0:0:51:0%:97:1E0:46:51:26:25:51 0/0:0:0:0:0:11:0%:22:1E0:51:11:9:2:11 0/0:0:0:0:0:56:0%:99:1E0:44:56:35:21:57 0/0:0:0:0:0:22:0%:40:1E0:41:22:15:7:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:25 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:35:0%:67:1E0:51:35:18:17:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:17:6:23 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:35:0%:67:1E0:48:35:13:22:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:18:0%:32:1E0:46:18:8:10:18 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:39:0%:74:1E0:45:39:19:20:40 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:26:0%:47:1E0:42:26:20:6:26 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:40 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:58:0%:99:1E0:46:58:32:26:58 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:45:0%:85:1E0:42:45:27:18:45 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:31 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:35 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:46 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:31 0/0:0:0:0:0:53:0%:99:1E0:42:53:32:21:53 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:36:0%:66:1E0:48:36:15:21:36 0/0:0:0:0:0:20:0%:36:1E0:49:20:14:6:20 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:44:0%:81:1E0:47:44:21:23:45 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:42:0%:77:1E0:45:42:28:14:42 0/0:0:0:0:0:54:0%:99:1E0:43:54:28:26:54 0/0:0:0:0:0:41:0%:78:1E0:47:41:24:17:42 0/0:0:0:0:0:36:0%:66:1E0:49:36:15:21:36 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:22:0%:40:1E0:51:22:14:8:22 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:27 0/0:0:0:0:0:36:0%:66:1E0:52:36:22:14:36 0/0:0:0:0:0:51:0%:97:1E0:42:51:31:20:53 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:19:0%:37:1E0:46:19:15:4:19 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:28 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:27 0/0:0:0:0:0:46:0%:85:1E0:40:46:29:17:46 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:24 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:31 0/0:0:0:0:0:20:0%:36:1E0:47:20:13:7:21 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:39 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:46:0%:85:1E0:46:46:22:24:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:28 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:44 0/0:34:1:0:1:30:3.33%:44:5E-1:44:29:18:11:30 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:20 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:31 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:27 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:19:12:31 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:16:7:23 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:57:0%:99:1E0:41:57:29:28:57 0/0:0:0:0:0:51:0%:97:1E0:41:51:34:17:51 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:30 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:45:0%:85:1E0:43:45:29:16:45 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:49:0%:93:1E0:41:49:30:19:49 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:44:0%:81:1E0:43:44:30:14:45 0/0:0:0:0:0:39:0%:74:1E0:40:39:26:13:39 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:22 0/0:0:0:0:0:46:0%:85:1E0:39:46:24:22:46 0/0:0:0:0:0:34:0%:62:1E0:40:34:23:11:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:38:0%:70:1E0:40:38:23:15:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:34:0%:62:1E0:40:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:21:0%:40:1E0:44:21:13:8:21 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 MTB_anc 3984321 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|cyp125_Rv3545c|gene3618|transcript|Transcript_gene3618|Coding|1/1|c.1125T>C|p.His375His|1125/1302|1125/1302|375/433||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3984321A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3984321A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:68:33:35:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:30:13:17:31:96.77%:99:6.8754E-17:60:1:1:0:33 1/1:48:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:29:14:15:30:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:46:20:9:11:21:95.24%:99:4.0873E-11:37:1:0:1:21 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:51:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:61:36:25:61:100%:99:2.609E-36:0:0:0:0:61 1/1:47:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:53:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:60:30:30:60:100%:99:1.035E-35:0:0:0:0:61 1/1:49:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:58:37:21:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:43:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:48:21:27:49:97.96%:99:1.9625E-27:37:1:1:0:50 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 3985118 . C T . PASS AC=18;AF=0.060;AN=300;ANN=T|missense_variant|MODERATE|cyp125_Rv3545c|gene3618|transcript|Transcript_gene3618|Coding|1/1|c.328G>A|p.Glu110Lys|328/1302|328/1302|110/433||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3985118C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3985118C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:41:53:25:28:53 0/0:0:0:0:0:20:0%:36:1E0:43:20:8:12:21 0/0:0:0:0:0:46:0%:85:1E0:46:46:18:28:46 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:22 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:0:0:0:0:25:0%:48:1E0:50:25:10:15:25 0/0:60:1:0:1:28:3.57%:41:5E-1:43:27:16:11:28 0/0:0:0:0:0:27:0%:52:1E0:50:27:10:17:27 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:51 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:64:0%:99:1E0:44:64:33:31:64 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:24 0/0:0:0:0:0:19:0%:37:1E0:44:19:11:8:19 0/0:0:0:0:0:21:0%:40:1E0:46:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:16:0%:29:1E0:43:16:6:10:17 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:21 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:32 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:23 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:25:0%:48:1E0:43:25:18:7:25 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/0:0:0:0:0:23:0%:44:1E0:42:23:9:14:23 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:34 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:46 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:38 0/0:0:0:0:0:58:0%:99:1E0:42:58:35:23:58 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:34 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:19:0%:37:1E0:40:19:12:7:19 0/0:0:0:0:0:27:0%:52:1E0:45:27:14:13:27 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:44 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:45 0/0:0:0:0:0:22:0%:40:1E0:48:22:8:14:23 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:42 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:27 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:11:16:27 0/0:0:0:0:0:44:0%:81:1E0:45:44:27:17:44 0/0:37:1:1:0:41:2.44%:66:5E-1:43:40:22:18:42 0/0:39:1:1:0:30:3.33%:44:5E-1:43:29:16:13:30 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:24:0%:44:1E0:41:24:17:7:26 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:24 0/0:0:0:0:0:51:0%:97:1E0:44:51:28:23:52 0/0:37:1:1:0:64:1.56%:99:5E-1:44:63:28:35:64 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:20:18:38 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:36 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:39 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:27:0%:52:1E0:48:27:9:18:27 0/0:39:1:0:1:31:3.23%:48:5E-1:45:30:17:13:31 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:26 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:23:0%:44:1E0:46:23:17:6:23 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:21:0%:40:1E0:42:21:8:13:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:43:0%:82:1E0:40:43:21:22:43 0/0:0:0:0:0:29:0%:55:1E0:47:29:21:8:29 0/0:0:0:0:0:67:0%:99:1E0:44:67:30:37:67 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:13:24:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:43 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:38 0/0:0:0:0:0:27:0%:52:1E0:43:27:9:18:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:41:0%:78:1E0:45:41:19:22:42 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:5:19:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:36 0/0:0:0:0:0:48:0%:89:1E0:45:48:21:27:48 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:33 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:48 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:39 0/0:0:0:0:0:71:0%:99:1E0:42:71:35:36:71 0/0:0:0:0:0:59:0%:99:1E0:40:59:28:31:59 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:17:11:28 0/0:0:0:0:0:63:0%:99:1E0:41:63:30:33:63 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:58:0%:99:1E0:42:58:30:28:58 0/0:0:0:0:0:46:0%:85:1E0:39:46:19:27:47 0/0:0:0:0:0:61:0%:99:1E0:41:61:25:36:61 0/0:0:0:0:0:64:0%:99:1E0:40:64:30:34:64 0/0:0:0:0:0:45:0%:85:1E0:40:45:20:25:48 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:41 0/0:0:0:0:0:54:0%:99:1E0:40:54:28:26:54 0/0:0:0:0:0:36:0%:66:1E0:38:36:15:21:36 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:60:0%:99:1E0:40:60:27:33:61 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 1/1:42:38:22:16:40:95%:99:1.4697E-21:37:1:1:0:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:33 0/0:0:0:0:0:38:0%:70:1E0:39:38:20:18:38 0/0:0:0:0:0:26:0%:47:1E0:39:26:13:13:26 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:37:1:1:0:45:2.22%:73:5E-1:41:44:23:21:45 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 MTB_anc 3988896 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv3549c_Rv3549c|gene3622|transcript|Transcript_gene3622|Coding|1/1|c.203C>T|p.Ser68Leu|203/780|203/780|68/259||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3988896G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3988896G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:53 0/0:0:0:0:0:20:0%:36:1E0:50:20:8:12:20 0/0:0:0:0:0:45:0%:85:1E0:46:45:32:13:45 0/0:0:0:0:0:18:0%:32:1E0:49:18:8:10:18 0/0:0:0:0:0:25:0%:48:1E0:47:25:8:17:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:23:7:30 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:0:0:0:0:28:0%:51:1E0:48:28:11:17:28 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:22 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:48 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:23:5:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:35 0/0:0:0:0:0:44:0%:81:1E0:40:44:32:12:46 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:33 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:26 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:36:0%:66:1E0:41:36:25:11:38 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:38:0%:70:1E0:39:38:30:8:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:37:1:1:0:41:2.44%:66:5E-1:44:40:23:17:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:70:0%:99:1E0:45:70:37:33:70 0/0:0:0:0:0:48:0%:89:1E0:44:48:20:28:48 0/0:0:0:0:0:41:0%:78:1E0:47:41:24:17:41 0/0:0:0:0:0:26:0%:47:1E0:41:26:19:7:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:30 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:19 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 0/0:0:0:0:0:47:0%:89:1E0:41:47:24:23:47 0/0:0:0:0:0:50:0%:92:1E0:43:50:27:23:51 0/0:0:0:0:0:36:0%:66:1E0:44:36:25:11:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:22 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:45 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:28 0/0:0:0:0:0:56:0%:99:1E0:42:56:29:27:57 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:37:1:1:0:32:3.12%:48:5E-1:44:31:18:13:32 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:33:1:0:1:45:2.22%:73:5E-1:42:44:22:22:45 0/0:0:0:0:0:55:0%:99:1E0:45:55:27:28:55 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:26:0%:47:1E0:49:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:48:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:45:29:19:10:29 0/0:0:0:0:0:28:0%:51:1E0:49:28:18:10:28 0/0:0:0:0:0:61:0%:99:1E0:41:61:36:25:64 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:19:0%:37:1E0:44:19:14:5:20 0/0:0:0:0:0:53:0%:99:1E0:43:53:24:29:53 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:25 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:46:0%:85:1E0:41:46:22:24:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:0:0:0:0:45:0%:85:1E0:40:45:26:19:45 0/0:0:0:0:0:18:0%:32:1E0:41:18:13:5:18 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 0/0:39:1:0:1:28:3.57%:41:5E-1:42:27:15:12:28 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:44:0%:81:1E0:43:44:24:20:44 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:37:1:1:0:22:4.55%:31:5E-1:40:21:14:7:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:14:16:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:39:35:17:18:36 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:34 0/0:0:0:0:0:45:0%:85:1E0:40:45:27:18:46 0/0:0:0:0:0:38:0%:70:1E0:38:38:22:16:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:20:0%:36:1E0:37:20:14:6:20 0/0:0:0:0:0:53:0%:99:1E0:40:53:29:24:53 0/0:0:0:0:0:56:0%:99:1E0:43:56:33:23:57 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:36:0%:66:1E0:38:36:23:13:37 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:45 0/0:0:0:0:0:31:0%:59:1E0:36:31:19:12:35 0/0:0:0:0:0:52:0%:96:1E0:37:52:29:23:52 0/0:0:0:0:0:31:0%:59:1E0:39:31:24:7:31 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:22:13:37 0/0:0:0:0:0:40:0%:74:1E0:39:40:23:17:40 0/0:0:0:0:0:34:0%:62:1E0:38:34:21:13:36 0/0:37:2:2:0:37:5.41%:50:2.4658E-1:39:35:22:13:38 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:47 0/0:0:0:0:0:36:0%:66:1E0:39:36:23:13:38 0/0:38:1:0:1:39:2.56%:62:5E-1:40:38:20:18:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:35 0/0:0:0:0:0:31:0%:59:1E0:42:31:19:12:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:44:0%:81:1E0:41:44:26:18:44 0/0:0:0:0:0:19:0%:37:1E0:41:19:15:4:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:36 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:52 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:29 MTB_anc 3989135 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv3549c_Rv3549c-echA20_Rv3550|gene3622-gene3623|intergenic_region|gene3622-gene3623|||n.3989135C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:48:27:21:49:97.96%:99:1.9625E-27:39:1:0:1:51 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:41:21:20:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:46:34:12:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:36:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:22:15:7:23:95.65%:99:2.9149E-12:38:1:1:0:24 1/1:41:12:4:8:12:100%:64:3.698E-7:0:0:0:0:14 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:32:14:18:33:96.97%:99:4.7095E-18:38:1:0:1:33 1/1:37:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:37:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:38:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 MTB_anc 3989914 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv3551_Rv3551|gene3624|transcript|Transcript_gene3624|Coding|1/1|c.19T>G|p.Ser7Ala|19/879|19/879|7/292||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.3989914T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3989914T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3989914T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:51:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:53:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:53:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:23:5:29:96.55%:99:9.9776E-16:38:1:0:1:29 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:44:18:26:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:14:14:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:46:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:19:11:8:20:95%:98:1.5234E-10:31:1:0:1:20 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:61:39:22:61:100%:99:2.609E-36:0:0:0:0:61 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:39:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:39:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 3992362 . G T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|Rv3553_Rv3553|gene3626|transcript|Transcript_gene3626|Coding|1/1|c.742G>T|p.Gly248Cys|742/1068|742/1068|248/355||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3992362G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.3992362G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:58:0%:99:1E0:44:58:29:29:59 0/0:0:0:0:0:12:0%:21:1E0:48:12:6:6:13 0/0:0:0:0:0:53:0%:99:1E0:47:53:28:25:53 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:23:0%:44:1E0:48:23:8:15:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:23:0%:44:1E0:51:23:14:9:23 0/0:0:0:0:0:27:0%:52:1E0:52:27:13:14:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:13:26:39 0/0:0:0:0:0:25:0%:48:1E0:51:25:11:14:26 0/0:0:0:0:0:51:0%:97:1E0:46:51:29:22:51 0/0:0:0:0:0:25:0%:48:1E0:43:25:9:16:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:13:23:36 0/0:0:0:0:0:22:0%:40:1E0:50:22:12:10:23 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:23 0/0:0:0:0:0:24:0%:44:1E0:50:24:7:17:24 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:25 0/0:0:0:0:0:43:0%:82:1E0:43:43:29:14:43 0/0:0:0:0:0:27:0%:52:1E0:51:27:10:17:27 0/0:0:0:0:0:46:0%:85:1E0:46:46:17:29:46 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:49:27:9:18:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:7:18:25 0/0:29:1:1:0:28:3.57%:41:5E-1:45:27:13:14:30 0/0:60:1:1:0:27:3.7%:41:5E-1:44:26:9:17:27 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:46:26:10:16:26 0/0:0:0:0:0:46:0%:85:1E0:43:46:17:29:46 0/0:0:0:0:0:49:0%:93:1E0:46:49:26:23:49 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:60:1:1:0:32:3.12%:48:5E-1:44:31:13:18:32 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:41 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:19 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:38 0/0:0:0:0:0:44:0%:81:1E0:45:44:16:28:45 0/0:0:0:0:0:25:0%:48:1E0:46:25:6:19:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:44:0%:81:1E0:44:44:25:19:44 0/0:0:0:0:0:44:0%:81:1E0:47:44:23:21:44 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:48 0/0:0:0:0:0:22:0%:40:1E0:53:22:12:10:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:46 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:38:1:1:0:49:2.04%:80:5E-1:46:48:25:23:49 0/0:0:0:0:0:36:0%:66:1E0:48:36:15:21:36 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:34 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:45:0%:85:1E0:49:45:19:26:46 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:52 0/0:0:0:0:0:37:0%:70:1E0:45:37:12:25:37 0/0:0:0:0:0:44:0%:81:1E0:48:44:20:24:45 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:24 0/0:0:0:0:0:24:0%:44:1E0:47:24:15:9:24 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:38 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:34:0%:62:1E0:46:34:10:24:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:65:0%:99:1E0:44:65:28:37:66 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:28 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:30 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:16:0%:29:1E0:50:16:9:7:16 0/0:0:0:0:0:28:0%:51:1E0:52:28:17:11:28 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:24:0%:44:1E0:50:24:11:13:25 0/0:0:0:0:0:50:0%:92:1E0:41:50:22:28:52 0/0:60:1:0:1:30:3.33%:44:5E-1:44:29:18:11:32 0/0:0:0:0:0:49:0%:93:1E0:44:49:18:31:49 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:9:23:33 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:48 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:43 0/0:0:0:0:0:46:0%:85:1E0:42:46:18:28:46 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:11:9:20 0/0:0:0:0:0:38:0%:70:1E0:47:38:20:18:38 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:33 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:42:0%:77:1E0:46:42:17:25:42 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:0:0:0:0:27:0%:52:1E0:41:27:9:18:28 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:49 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:26:14:41 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:38 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:46 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:30 0/0:0:0:0:0:67:0%:99:1E0:42:67:31:36:67 0/0:0:0:0:0:51:0%:97:1E0:41:51:25:26:51 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:31 0/0:0:0:0:0:55:0%:99:1E0:40:55:26:29:57 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:56:0%:99:1E0:41:56:31:25:59 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:51 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:53 1/1:40:34:16:18:35:97.14%:99:3.2089E-19:38:1:0:1:35 0/0:0:0:0:0:43:0%:82:1E0:41:43:14:29:43 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:46 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:44 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 0/0:0:0:0:0:45:0%:85:1E0:39:45:24:21:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:70:0%:99:1E0:38:70:29:41:70 0/0:0:0:0:0:41:0%:78:1E0:41:41:19:22:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:22:20:42 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:35 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:33 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:17:25:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:11:24:36 MTB_anc 3994898 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3555c_Rv3555c|gene3628|transcript|Transcript_gene3628|Coding|1/1|c.802C>T|p.Arg268Trp|802/870|802/870|268/289||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3994898G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.3994898G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:61:33:28:61:100%:99:2.609E-36:0:0:0:0:61 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:51:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:66:33:33:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:34:13:21:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:60:30:30:60:100%:99:1.035E-35:0:0:0:0:62 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 MTB_anc 3997000 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|intergenic_region|MODIFIER|fadA6_Rv3556c-Rv3557c_Rv3557c|gene3629-gene3630|intergenic_region|gene3629-gene3630|||n.3997000C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:15:0%:29:1E0:51:15:8:7:15 0/0:0:0:0:0:49:0%:93:1E0:44:49:23:26:50 0/0:0:0:0:0:38:0%:70:1E0:46:38:22:16:38 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:30:0%:55:1E0:50:30:13:17:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:47:26:9:17:27 0/0:0:0:0:0:41:0%:78:1E0:46:41:17:24:41 0/0:0:0:0:0:34:0%:62:1E0:51:34:20:14:34 0/0:0:0:0:0:48:0%:89:1E0:44:48:29:19:49 0/0:0:0:0:0:20:0%:36:1E0:50:20:12:8:20 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:60:1:0:1:28:3.57%:41:5E-1:44:27:12:15:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:60:1:0:1:38:2.63%:58:5E-1:48:37:22:15:38 0/0:0:0:0:0:22:0%:40:1E0:42:22:7:15:23 0/0:0:0:0:0:13:0%:25:1E0:47:13:10:3:13 0/0:0:0:0:0:32:0%:59:1E0:49:32:12:20:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:10:17:28 0/0:39:1:0:1:46:2.17%:73:5E-1:44:45:25:20:47 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:10:21:32 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:15:0%:29:1E0:48:15:6:9:16 0/0:0:0:0:0:17:0%:33:1E0:45:17:8:9:17 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:26 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:35 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:38:1:0:1:39:2.56%:62:5E-1:43:38:18:20:39 0/0:0:0:0:0:58:0%:99:1E0:45:58:29:29:60 0/0:0:0:0:0:46:0%:85:1E0:46:46:18:28:47 0/0:0:0:0:0:52:0%:96:1E0:45:52:26:26:52 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:49 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:28 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:27 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:39 0/0:0:0:0:0:46:0%:85:1E0:47:46:27:19:47 0/0:0:0:0:0:15:0%:29:1E0:50:15:6:9:16 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:43 0/0:60:1:1:0:16:6.25%:21:5E-1:49:15:11:4:17 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:30 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:44:0%:81:1E0:43:44:15:29:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:11:21:33 0/0:38:1:1:0:43:2.33%:70:5E-1:44:42:24:18:43 0/0:0:0:0:0:39:0%:74:1E0:46:39:22:17:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:40 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:42 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:43 0/0:0:0:0:0:56:0%:99:1E0:48:56:28:28:56 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:13:22:36 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:51:23:9:14:24 0/0:0:0:0:0:37:0%:70:1E0:49:37:21:16:37 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:32 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:50:33:17:16:33 0/0:0:0:0:0:45:0%:85:1E0:43:45:18:27:46 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:27 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:17 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:43 0/0:0:0:0:0:37:0%:70:1E0:45:37:23:14:37 0/0:0:0:0:0:24:0%:44:1E0:50:24:18:6:24 0/0:0:0:0:0:34:0%:62:1E0:39:34:14:20:35 0/0:0:0:0:0:34:0%:62:1E0:40:34:9:25:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:20:19:39 0/0:0:0:0:0:20:0%:36:1E0:48:20:10:10:21 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:37 0/0:0:0:0:0:22:0%:40:1E0:49:22:6:16:23 0/0:60:1:1:0:26:3.85%:38:5E-1:43:25:14:11:26 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:42:0%:77:1E0:41:42:20:22:42 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:19:0%:37:1E0:46:19:9:10:19 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:44 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:8:21:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:9:27:37 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:12:18:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:37:1:1:0:41:2.44%:66:5E-1:43:40:20:20:41 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:34 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:52:0%:96:1E0:38:52:24:28:52 0/0:0:0:0:0:44:0%:81:1E0:41:44:16:28:45 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:36 0/0:0:0:0:0:22:0%:40:1E0:40:22:10:12:24 0/0:0:0:0:0:62:0%:99:1E0:42:62:39:23:64 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:52 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:25 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:51 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:37 0/0:0:0:0:0:36:0%:66:1E0:41:36:10:26:37 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:48 0/0:0:0:0:0:34:0%:62:1E0:38:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:29 0/0:0:0:0:0:44:0%:81:1E0:47:44:18:26:45 0/0:0:0:0:0:50:0%:92:1E0:40:50:14:36:52 0/0:0:0:0:0:50:0%:92:1E0:44:50:24:26:51 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:34 0/0:0:0:0:0:28:0%:51:1E0:39:28:19:9:32 0/0:0:0:0:0:26:0%:47:1E0:35:26:11:15:27 0/0:60:1:0:1:35:2.86%:55:5E-1:44:34:21:13:35 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:54 0/0:0:0:0:0:51:0%:97:1E0:43:51:18:33:51 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:56:0%:99:1E0:39:56:21:35:56 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:43:0%:82:1E0:43:43:24:19:43 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:51 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 MTB_anc 3997479 . G A . PASS AC=16;AF=0.053;AN=300;ANN=A|synonymous_variant|LOW|Rv3557c_Rv3557c|gene3630|transcript|Transcript_gene3630|Coding|1/1|c.153C>T|p.Phe51Phe|153/603|153/603|51/200||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.3997479G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.3997479G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:16:0%:29:1E0:48:16:10:6:16 0/0:0:0:0:0:54:0%:99:1E0:46:54:26:28:54 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:25:0%:48:1E0:42:25:16:9:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:33:0%:63:1E0:51:33:17:16:33 0/0:0:0:0:0:39:0%:74:1E0:52:39:22:17:39 0/0:0:0:0:0:41:0%:78:1E0:47:41:21:20:41 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:53 0/0:0:0:0:0:19:0%:37:1E0:46:19:12:7:21 0/0:0:0:0:0:48:0%:89:1E0:46:48:25:23:48 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:25 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:46:23:16:7:23 0/0:0:0:0:0:20:0%:36:1E0:49:20:12:8:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:20:24:45 0/0:0:0:0:0:27:0%:52:1E0:50:27:15:12:27 0/0:0:0:0:0:42:0%:77:1E0:47:42:20:22:42 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:16:0%:29:1E0:51:16:8:8:16 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:15:8:23 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:60:1:1:0:35:2.86%:55:5E-1:49:34:13:21:36 0/0:38:1:1:0:31:3.23%:44:5E-1:45:29:13:16:31 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:53:0%:99:1E0:46:53:35:18:53 0/0:0:0:0:0:62:0%:99:1E0:48:62:38:24:62 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:45 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:43 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:19:0%:37:1E0:38:19:13:6:19 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:46:0%:85:1E0:44:46:22:24:47 0/0:60:1:0:1:48:2.08%:76:5E-1:43:47:22:25:49 0/0:0:0:0:0:46:0%:85:1E0:46:46:24:22:46 0/0:0:0:0:0:19:0%:37:1E0:53:19:8:11:19 0/0:0:0:0:0:45:0%:85:1E0:45:45:26:19:45 0/0:0:0:0:0:27:0%:52:1E0:46:27:10:17:27 0/0:0:0:0:0:39:0%:74:1E0:47:39:16:23:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:32 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:48 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:25:0%:48:1E0:47:25:18:7:25 0/0:0:0:0:0:51:0%:97:1E0:43:51:23:28:51 0/0:0:0:0:0:48:0%:89:1E0:49:48:23:25:49 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:26:17:44 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:27 0/0:0:0:0:0:45:0%:85:1E0:45:45:25:20:45 0/0:0:0:0:0:66:0%:99:1E0:47:66:44:22:68 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:31:0%:59:1E0:47:31:21:10:31 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:46 0/0:0:0:0:0:30:0%:55:1E0:47:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:48:28:12:16:28 0/0:0:0:0:0:49:0%:93:1E0:47:49:27:22:50 0/0:38:1:1:0:41:2.44%:66:5E-1:43:40:22:18:42 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:7:20:27 0/0:33:1:0:1:26:3.85%:38:5E-1:55:25:12:13:27 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:27 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:44:0%:81:1E0:47:44:22:22:45 0/0:0:0:0:0:47:0%:89:1E0:45:47:31:16:48 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:33:0%:63:1E0:47:33:15:18:33 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:21:0%:40:1E0:47:21:16:5:21 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:35 0/0:0:0:0:0:52:0%:96:1E0:44:52:24:28:53 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:19 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:19:22:42 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:16:23:39 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:23:10:33 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:35 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 1/1:45:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:22 1/1:44:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:51 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:37 0/0:0:0:0:0:54:0%:99:1E0:47:54:30:24:55 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:81:0%:99:1E0:42:81:46:35:81 0/0:0:0:0:0:61:0%:99:1E0:42:61:31:30:61 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:28 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:50 0/0:0:0:0:0:37:0%:70:1E0:40:37:23:14:38 0/0:0:0:0:0:58:0%:99:1E0:42:58:31:27:59 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:48 0/0:0:0:0:0:49:0%:93:1E0:43:49:30:19:50 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 0/0:0:0:0:0:48:0%:89:1E0:40:48:29:19:50 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:53 0/0:0:0:0:0:56:0%:99:1E0:42:56:25:31:56 0/0:0:0:0:0:27:0%:52:1E0:40:27:10:17:27 0/0:0:0:0:0:51:0%:97:1E0:38:51:28:23:52 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:35 0/0:37:1:1:0:36:2.78%:55:5E-1:44:35:18:17:37 0/0:0:0:0:0:48:0%:89:1E0:40:48:21:27:48 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:41 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:45:0%:85:1E0:44:45:22:23:45 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:42 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:28:14:42 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 0/0:0:0:0:0:52:0%:96:1E0:41:52:22:30:53 MTB_anc 4004650 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|fadE32_Rv3563|gene3636|transcript|Transcript_gene3636|Coding|1/1|c.360C>T|p.Thr120Thr|360/960|360/960|120/319||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.4004650C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4004650C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4004650C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:53:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:51:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:18:11:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:71:37:34:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:19:12:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 4005114 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|fadE32_Rv3563|gene3636|transcript|Transcript_gene3636|Coding|1/1|c.824C>G|p.Ser275Trp|824/960|824/960|275/319||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.4005114C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4005114C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4005114C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:53:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:43:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:35:18:17:36:97.22%:99:8.3613E-20:37:1:0:1:36 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:57:20:37:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:43:18:25:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:40:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:31:6:25:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:56:23:33:57:98.25%:99:2.5602E-33:0:0:0:0:59 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:47:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:54:26:28:55:98.18%:99:4.0229E-32:0:0:0:0:57 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:14:8:6:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:24 1/1:36:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:37:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:38:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:35:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:27:8:19:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 4007625 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|nat_Rv3566c|gene3639|transcript|Transcript_gene3639|Coding|1/1|c.558G>A|p.Gln186Gln|558/852|558/852|186/283||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4007625C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4007625C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|isoniazid|||n.4007625C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:14:0%:25:1E0:41:14:8:6:16 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:21:0%:40:1E0:46:21:13:8:21 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:29 0/0:0:0:0:0:13:0%:25:1E0:41:13:11:2:14 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:24 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:11:11:22 0/0:0:0:0:0:24:0%:44:1E0:46:24:17:7:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:25 0/0:0:0:0:0:27:0%:52:1E0:44:27:18:9:27 0/0:0:0:0:0:19:0%:37:1E0:38:19:12:7:19 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:43 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:30 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:39:0%:74:1E0:44:39:22:17:39 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:30 0/0:0:0:0:0:13:0%:25:1E0:47:13:9:4:14 0/0:39:1:1:0:25:4%:38:5E-1:47:24:10:14:25 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:30:0%:55:1E0:39:30:13:17:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:20:13:33 0/0:0:0:0:0:21:0%:40:1E0:43:21:7:14:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:30 0/0:0:0:0:0:56:0%:99:1E0:43:56:31:25:56 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:27 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:31 0/0:0:0:0:0:16:0%:29:1E0:40:16:7:9:16 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:18:9:27 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:38 0/0:0:0:0:0:36:0%:66:1E0:39:36:26:10:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:18 0/0:0:0:0:0:30:0%:55:1E0:41:30:23:7:30 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:34 0/0:0:0:0:0:19:0%:37:1E0:40:19:13:6:23 0/0:0:0:0:0:29:0%:55:1E0:39:29:13:16:30 0/0:0:0:0:0:26:0%:47:1E0:40:26:17:9:26 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:17 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:37 0/0:0:0:0:0:46:0%:85:1E0:45:46:29:17:46 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:30 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:45:25:18:7:26 0/0:0:0:0:0:37:0%:70:1E0:38:37:22:15:37 0/0:0:0:0:0:54:0%:99:1E0:41:54:30:24:55 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:13:0%:25:1E0:42:13:9:4:14 0/0:0:0:0:0:22:0%:40:1E0:45:22:15:7:23 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:41 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:34 0/0:0:0:0:0:19:0%:37:1E0:49:19:11:8:20 0/0:0:0:0:0:23:0%:44:1E0:45:23:7:16:23 0/0:0:0:0:0:31:0%:59:1E0:39:31:18:13:33 0/0:0:0:0:0:30:0%:55:1E0:41:30:19:11:30 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:24 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:38:0%:70:1E0:40:38:25:13:39 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:26:0%:47:1E0:44:26:16:10:26 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:16:0%:29:1E0:44:16:10:6:16 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:17:7:25 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:25 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:42 0/0:0:0:0:0:27:0%:52:1E0:39:27:19:8:27 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:47 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:17 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:31 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:31 0/0:0:0:0:0:38:0%:70:1E0:38:38:23:15:39 0/0:0:0:0:0:13:0%:25:1E0:41:13:9:4:13 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:28 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:49 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:41 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:30 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:36 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:58:0%:99:1E0:40:58:38:20:61 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:16:0%:29:1E0:40:16:10:6:16 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:33 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:42 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:41 0/0:0:0:0:0:26:0%:47:1E0:39:26:19:7:28 0/0:0:0:0:0:36:0%:66:1E0:38:36:26:10:39 0/0:0:0:0:0:33:0%:63:1E0:39:33:22:11:35 0/0:0:0:0:0:40:0%:74:1E0:39:40:27:13:42 0/0:0:0:0:0:30:0%:55:1E0:38:30:18:12:31 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:36 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:31 0/0:0:0:0:0:42:0%:77:1E0:37:42:28:14:42 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:38:1:0:1:21:4.76%:31:5E-1:42:20:11:9:21 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:35 0/0:0:0:0:0:40:0%:74:1E0:41:40:30:10:40 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:39 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:43 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:28 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:34:0%:62:1E0:40:34:24:10:35 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:46 0/0:0:0:0:0:51:0%:97:1E0:42:51:24:27:52 0/0:0:0:0:0:34:0%:62:1E0:37:34:21:13:34 MTB_anc 4008747 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|hsaB_Rv3567c|gene3641|transcript|Transcript_gene3641|Coding|1/1|c.536C>T|p.Thr179Ile|536/564|536/564|179/187||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4008747G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4008747G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:18:9:9:19:94.74%:92:5.6585E-10:39:1:0:1:19 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:54:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:54:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:49:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:53:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:52:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:40:51:15:36:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:41:43:10:33:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:39:39:16:23:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:38:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:36:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 MTB_anc 4012219 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|hsaA_Rv3570c|gene3644|transcript|Transcript_gene3644|Coding|1/1|c.52G>A|p.Asp18Asn|52/1185|52/1185|18/394||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.4012219C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4012219C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4012219C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:68:36:32:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:49:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:71:28:43:71:100%:99:2.6835E-42:0:0:0:0:71 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:51:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:51:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:42:11:31:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:70:42:28:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:44:56:21:35:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 MTB_anc 4016802 . A C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|kstR_Rv3574|gene3648|transcript|Transcript_gene3648|Coding|1/1|c.319A>C|p.Asn107His|319/600|319/600|107/199||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4016802A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.4016802A>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:45:46:26:20:46 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:39:0%:74:1E0:48:39:21:18:40 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:17:0%:33:1E0:49:17:7:10:18 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:51:32:15:17:32 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:15:0%:29:1E0:47:15:6:9:16 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:26 0/0:0:0:0:0:24:0%:44:1E0:48:24:7:17:25 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:36 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:24:0%:44:1E0:52:24:11:13:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:26 0/0:0:0:0:0:25:0%:48:1E0:42:25:10:15:27 0/0:0:0:0:0:47:0%:89:1E0:46:47:29:18:48 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:13:0%:25:1E0:44:13:5:8:13 0/0:0:0:0:0:17:0%:33:1E0:46:17:11:6:17 0/0:0:0:0:0:27:0%:52:1E0:46:27:9:18:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:41:36:20:16:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:7:13:20 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:35 0/0:0:0:0:0:20:0%:36:1E0:43:20:6:14:21 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:13:24:37 0/0:33:1:0:1:55:1.82%:91:5E-1:46:54:26:28:55 0/1:45:27:11:16:34:79.41%:99:7.9014E-13:40:7:3:4:35 0/0:0:0:0:0:49:0%:93:1E0:42:49:26:23:49 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:45 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:22 0/0:0:0:0:0:31:0%:59:1E0:45:31:19:12:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:18:7:25 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:37 0/0:0:0:0:0:36:0%:66:1E0:47:36:15:21:36 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:32 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:29:0%:55:1E0:48:29:13:16:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:19:0%:37:1E0:48:19:8:11:21 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:29 0/0:0:0:0:0:21:0%:40:1E0:39:21:10:11:23 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:41 0/0:0:0:0:0:22:0%:40:1E0:41:22:7:15:22 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:11:19:30 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:37:0%:70:1E0:46:37:19:18:37 0/0:0:0:0:0:31:0%:59:1E0:44:31:9:22:31 0/0:0:0:0:0:29:0%:55:1E0:49:29:18:11:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:45:0%:85:1E0:46:45:26:19:47 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:20 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:26:0%:47:1E0:48:26:18:8:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:0:0:0:0:48:0%:89:1E0:42:48:22:26:48 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:21:0%:40:1E0:48:21:7:14:22 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:49 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:16:0%:29:1E0:45:16:11:5:16 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:36 0/0:60:1:0:1:32:3.12%:48:5E-1:42:31:16:15:32 0/0:0:0:0:0:15:0%:29:1E0:45:15:8:7:17 0/0:0:0:0:0:41:0%:78:1E0:48:41:17:24:41 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:29 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:22:0%:40:1E0:50:22:12:10:22 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:34 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:33 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:18 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:39:35:19:16:35 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:17 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:26 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:42:0%:77:1E0:44:42:27:15:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:36:0%:66:1E0:46:36:14:22:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:25:0%:48:1E0:40:25:7:18:25 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:24:0%:44:1E0:38:24:15:9:25 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:52 0/0:0:0:0:0:50:0%:92:1E0:40:50:19:31:50 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:45:0%:85:1E0:38:45:22:23:48 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:47:0%:89:1E0:39:47:22:25:47 0/0:0:0:0:0:54:0%:99:1E0:38:54:29:25:56 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:38 0/0:0:0:0:0:38:0%:70:1E0:44:38:15:23:42 0/0:0:0:0:0:28:0%:51:1E0:38:28:17:11:28 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:36 0/0:0:0:0:0:40:0%:74:1E0:37:40:19:21:41 0/0:38:1:1:0:33:3.03%:52:5E-1:41:32:14:18:33 0/0:0:0:0:0:48:0%:89:1E0:38:48:23:25:48 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 0/0:0:0:0:0:36:0%:66:1E0:46:36:15:21:37 0/0:0:0:0:0:52:0%:96:1E0:40:52:25:27:52 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:41 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:27:0%:52:1E0:40:27:9:18:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:22 0/0:0:0:0:0:36:0%:66:1E0:42:36:9:27:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:44 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:42 MTB_anc 4025762 . T TA . PASS AC=4;AF=0.013;AN=300;ANN=TA|intergenic_region|MODIFIER|Rv3583c_Rv3583c-lpqE_Rv3584|gene3657-gene3658|intergenic_region|gene3657-gene3658|||n.4025762_4025763insA||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:45:37:13:24:37 0/0:0:0:0:0:23:0%:44:1E0:50:23:19:4:23 0/0:0:0:0:0:50:0%:92:1E0:45:50:24:26:50 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:15:9:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:18:11:30 0/0:0:0:0:0:32:0%:59:1E0:49:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:29 0/0:0:0:0:0:31:0%:59:1E0:49:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:48:23:13:10:23 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:49 0/0:0:0:0:0:13:0%:25:1E0:51:13:5:8:13 0/0:0:0:0:0:52:0%:96:1E0:45:52:23:29:52 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:40 0/0:0:0:0:0:29:0%:55:1E0:46:29:11:18:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:34 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:24 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:56:0%:99:1E0:42:56:34:22:56 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:46:0%:85:1E0:49:46:27:19:46 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:11:14:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:25 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:39 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:27 0/0:0:0:0:0:37:0%:70:1E0:51:37:20:17:39 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:40 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:38 0/0:0:0:0:0:55:0%:99:1E0:48:55:25:30:55 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:41 0/0:0:0:0:0:54:0%:99:1E0:45:54:32:22:55 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:27 0/0:0:0:0:0:41:0%:78:1E0:47:41:24:17:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:24 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:44 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:29 0/0:0:0:0:0:47:0%:89:1E0:42:47:21:26:47 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:34 0/0:0:0:0:0:45:0%:85:1E0:47:45:20:25:46 0/0:0:0:0:0:19:0%:37:1E0:49:19:5:14:19 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:31 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:18 0/0:0:0:0:0:46:0%:85:1E0:47:46:25:21:46 0/0:0:0:0:0:45:0%:85:1E0:46:45:21:24:45 0/0:0:0:0:0:49:0%:93:1E0:44:49:30:19:50 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:35:0%:67:1E0:49:35:19:16:35 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:49 0/0:0:0:0:0:65:0%:99:1E0:45:65:35:30:65 0/0:60:1:0:1:32:3.12%:48:5E-1:49:31:17:14:32 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:52 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:34:0%:62:1E0:44:34:20:14:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:38:0%:70:1E0:47:38:22:16:38 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:24 0/0:0:0:0:0:37:0%:70:1E0:47:37:21:16:37 0/0:0:0:0:0:45:0%:85:1E0:44:45:18:27:46 0/0:0:0:0:0:40:0%:74:1E0:47:40:16:24:40 0/0:0:0:0:0:30:0%:55:1E0:42:30:11:19:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:25:10:35 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:45 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:30 0/0:0:0:0:0:61:0%:99:1E0:44:61:33:28:61 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:19:13:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:29 0/0:0:0:0:0:41:0%:78:1E0:49:41:19:22:41 0/0:0:0:0:0:28:0%:51:1E0:43:28:12:16:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:33:0%:63:1E0:50:33:18:15:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:24:14:38 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:0:0:0:0:55:0%:99:1E0:43:55:29:26:57 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:22:0%:40:1E0:41:22:7:15:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:11:18:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:35 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:20:15:35 0/0:0:0:0:0:20:0%:36:1E0:43:20:11:9:21 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:35 0/0:0:0:0:0:26:0%:47:1E0:46:26:18:8:26 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:41 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:27:0%:52:1E0:40:27:11:16:27 0/0:0:0:0:0:41:0%:78:1E0:39:41:25:16:41 0/0:0:0:0:0:36:0%:66:1E0:40:36:24:12:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:11:19:30 1/1:40:24:14:10:24:96%:99:3.101E-14:0:0:0:0:25 1/1:42:58:28:30:60:95.08%:99:1.087E-31:34:3:2:1:61 0/0:0:0:0:0:61:0%:99:1E0:43:61:32:29:61 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:50:0%:92:1E0:40:50:24:26:51 0/0:0:0:0:0:42:0%:77:1E0:41:42:17:25:43 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:48 0/0:0:0:0:0:40:0%:74:1E0:37:40:24:16:40 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:33 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:34 0/0:0:0:0:0:43:0%:82:1E0:41:43:20:23:44 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:32 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:41 0/0:0:0:0:0:22:0%:40:1E0:40:22:7:15:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:40:0%:74:1E0:40:40:19:21:40 0/0:0:0:0:0:50:0%:92:1E0:46:50:19:31:50 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:28 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:45 0/0:32:1:1:0:47:2.13%:77:5E-1:42:46:22:24:47 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 MTB_anc 4028752 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3586_Rv3586|gene3660|transcript|Transcript_gene3660|Coding|1/1|c.862G>A|p.Ala288Thr|862/1077|862/1077|288/358||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4028752G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4028752G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:61:26:35:61:100%:99:2.609E-36:0:0:0:0:62 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:54:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:49:22:27:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:53:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:51:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:49:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:63:38:25:63:100%:99:1.657E-37:0:0:0:0:65 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:52:45:14:31:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 4031148 . CAT C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|frameshift_variant|HIGH|mutY_Rv3589|gene3663|transcript|Transcript_gene3663|Coding|1/1|c.657_658delAT|p.Trp220fs|657/915|657/915|219/304||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4031149_4031150delAT||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.4031149_4031150delAT||||||;HOM=0;LOF=(mutY_Rv3589|gene3663|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:45:51:29:22:51 0/0:0:0:0:0:15:0%:29:1E0:49:15:6:9:15 0/0:0:0:0:0:41:0%:78:1E0:45:41:17:24:43 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:39:0%:74:1E0:42:39:14:25:39 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:36:0%:66:1E0:47:36:16:20:36 0/0:0:0:0:0:17:0%:33:1E0:46:17:11:6:17 0/0:0:0:0:0:22:0%:40:1E0:50:22:10:12:23 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:20:0%:36:1E0:43:20:16:4:20 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:44 0/0:0:0:0:0:14:0%:25:1E0:37:14:6:8:14 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:18:0%:32:1E0:41:18:9:9:19 0/0:0:0:0:0:25:0%:48:1E0:47:25:17:8:25 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:22 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:16:0%:29:1E0:46:16:13:3:16 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:36:0%:66:1E0:38:36:22:14:36 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:42:0%:77:1E0:47:42:25:17:43 0/0:0:0:0:0:18:0%:32:1E0:44:18:7:11:18 0/0:0:0:0:0:20:0%:36:1E0:47:20:13:7:20 0/0:0:0:0:0:13:0%:25:1E0:40:13:8:5:13 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:33:1:1:0:32:3.12%:48:5E-1:42:31:13:18:33 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:47 0/0:0:0:0:0:35:0%:67:1E0:43:35:20:15:35 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:55 0/1:43:33:17:16:44:71.74%:99:9.8525E-15:45:13:10:3:46 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:36 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:9:26:35 0/0:0:0:0:0:35:0%:67:1E0:43:35:19:16:35 0/0:0:0:0:0:38:0%:70:1E0:43:37:22:15:38 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:13:0%:25:1E0:43:13:7:6:13 0/0:0:0:0:0:49:0%:93:1E0:42:49:21:28:49 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:15 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:7:15:23 0/0:0:0:0:0:54:0%:99:1E0:44:54:31:23:55 0/0:0:0:0:0:37:0%:66:1E0:41:36:14:22:37 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:21:10:31 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:31 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:60:1:0:1:54:1.85%:87:5E-1:46:53:28:25:56 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:25:13:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:25 0/0:0:0:0:0:15:0%:29:1E0:53:15:8:7:15 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:25:0%:48:1E0:51:25:7:18:25 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:29:0%:55:1E0:49:29:12:17:29 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:10:16:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:13:20:34 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:10:20:31 0/0:0:0:0:0:9:0%:18:1E0:43:9:5:4:10 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:19:0%:37:1E0:45:19:11:8:19 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:17:0%:33:1E0:47:17:5:12:17 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:38 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:29 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:47:0%:89:1E0:44:47:28:19:49 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/0:0:0:0:0:25:0%:48:1E0:46:25:10:15:25 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:28 0/0:0:0:0:0:15:0%:29:1E0:44:15:6:9:15 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:32 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:53:0%:99:1E0:43:53:31:22:53 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:31:14:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:38 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:30 0/0:0:0:0:0:21:0%:40:1E0:39:21:8:13:22 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:41 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:39:0%:74:1E0:38:39:22:17:40 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:27 0/0:0:0:0:0:42:0%:77:1E0:41:42:19:23:43 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:32 0/0:0:0:0:0:46:0%:85:1E0:44:46:26:20:47 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:26 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:31 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:42 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:26 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:35 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:33 0/0:0:0:0:0:52:0%:96:1E0:41:52:27:25:53 0/0:0:0:0:0:42:0%:77:1E0:42:42:23:19:43 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:30 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:26 0/0:0:0:0:0:49:0%:93:1E0:38:49:27:22:49 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:20 0/0:0:0:0:0:26:0%:47:1E0:43:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:11:20:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:33 0/0:0:0:0:0:17:0%:33:1E0:48:17:9:8:17 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:23:16:39 0/0:0:0:0:0:25:0%:48:1E0:38:25:17:8:27 MTB_anc 4031626 . G A . PASS AC=292;AF=1.00;AN=292;ANN=A|synonymous_variant|LOW|PE_PGRS58_Rv3590c|gene3664|transcript|Transcript_gene3664|Coding|1/1|c.1533C>T|p.Gly511Gly|1533/1755|1533/1755|511/584||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4031626G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.4031626G>A||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:29 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:36:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:35:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:27:21:6:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:34:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:35:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:31:24:7:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:34:13:7:6:14:92.86%:64:3.7391E-7:33:1:0:1:14 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:39:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:32:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:34:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:35:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:36:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:20:4:24:100%:99:3.101E-14:0:0:0:0:27 1/1:36:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:33:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:42:32:10:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:31:24:7:32:96.88%:99:2.1486E-18:0:0:0:0:35 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:35:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:15:13:2:16:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:34:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:34:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:24:13:11:25:96%:99:2.0568E-13:29:1:1:0:25 1/1:34:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:35:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:38:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:34:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:35:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:34:24:18:6:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:35:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:34:24:20:4:24:100%:99:3.101E-14:0:0:0:0:26 1/1:34:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:35:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:35:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:35:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:34:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:34:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:14 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:35:15:15:0:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:34:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:35:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:36:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:40:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:35:24:18:6:25:96%:99:3.101E-14:0:0:0:0:26 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:16:16:0:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:32:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:33:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:33:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:25:22:3:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:21:19:2:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:33:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:18:10:8:19:100%:99:1.1019E-10:0:0:0:0:19 1/1:33:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:17:16:1:18:94.44%:86:2.0936E-9:32:1:0:1:19 1/1:36:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:35:31:19:12:32:96.88%:99:1.8007E-17:30:1:0:1:33 1/1:34:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 MTB_anc 4037185 . T G . PASS AC=240;AF=1.00;AN=240;ANN=G|missense_variant|MODERATE|PE_PGRS59_Rv3595c|gene3669|transcript|Transcript_gene3669|Coding|1/1|c.866A>C|p.Asn289Thr|866/1320|866/1320|289/439||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4037185T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.4037185T>G||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:35:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:33:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:35:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:33:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:33:16:15:1:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:34:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:33:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:13 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:20:18:2:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:34:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:33:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:20:19:1:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:34:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:36:22:20:2:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:33:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:33:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:33:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:12:12:0:12:100%:64:3.698E-7:0:0:0:0:14 1/1:33:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:31:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:35:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:35:11:10:1:12:100%:58:1.4176E-6:0:0:0:0:13 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:33:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:33:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:35:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:10 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:35:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:35:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:34:10:8:2:11:90.91%:47:1.7011E-5:35:1:0:1:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:31:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:31:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:35:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:16:16:0:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:34:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:34:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 MTB_anc 4037187 . T G . PASS AC=236;AF=1.00;AN=236;ANN=G|synonymous_variant|LOW|PE_PGRS59_Rv3595c|gene3669|transcript|Transcript_gene3669|Coding|1/1|c.864A>C|p.Gly288Gly|864/1320|864/1320|288/439||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4037187T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.4037187T>G||||||;HET=0;WT=0;set=variant-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:35:22:19:3:22:100%:99:4.7526E-13:0:0:0:0:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:34:12:11:1:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:33:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:35:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:12:11:1:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:34:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:33:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:32:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:34:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:34:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:32:18:17:1:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:35:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:34:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:34:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:34:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:32:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:12:12:0:12:100%:64:3.698E-7:0:0:0:0:13 1/1:36:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:21 1/1:35:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:16:14:2:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:11 1/1:35:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:34:23:21:2:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:20:17:3:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:35:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:34:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:35:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:34:13:13:0:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:33:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:24:21:3:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:11:10:1:12:100%:58:1.4176E-6:0:0:0:0:13 1/1:36:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:34:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:34:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:34:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:19:17:2:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:32:15:14:1:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:33:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:35:14:13:1:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:33:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:33:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:18:15:3:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:32:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:32:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:8:6:2:8:100%:41:7.77E-5:0:0:0:0:11 1/1:34:12:9:3:12:100%:64:3.698E-7:0:0:0:0:14 1/1:34:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:8:8:0:8:100%:41:7.77E-5:0:0:0:0:9 1/1:34:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:33:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:34:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:34:16:16:0:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:17:16:1:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:34:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:7:1:8:100%:41:7.77E-5:0:0:0:0:8 1/1:34:12:12:0:12:100%:64:3.698E-7:0:0:0:0:12 1/1:34:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:10:10:0:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:31:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:35:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:12:1:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:35:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:9 MTB_anc 4049476 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|folP1_Rv3608c|gene3681|transcript|Transcript_gene3681|Coding|1/1|c.505G>A|p.Val169Ile|505/843|505/843|169/280||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.4049476C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PAS_co-trimoxazole|||n.4049476C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4049476C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:53:36:17:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:32:27:5:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:51:35:16:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:37:24:19:5:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:31:25:6:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:59:40:19:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:38:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:31:23:8:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:40:33:7:41:97.56%:99:9.8874E-23:32:1:1:0:41 1/1:40:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:40:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:50:35:15:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:36:25:11:37:97.3%:99:2.1762E-20:38:1:0:1:37 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:33:26:7:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:29:23:6:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:36:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:36:34:27:7:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:40:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:39:32:7:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:40:30:10:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:36:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:38:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:37:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:35:25:10:36:97.22%:99:8.3613E-20:32:1:1:0:36 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:37:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 4053050 . A G . PASS AC=292;AF=0.973;AN=300;ANN=G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4053050A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4053050A>G||||||,G|intergenic_region|MODIFIER|ftsH_Rv3610c-Rv3612c_Rv3612c|gene3683-gene3684|intergenic_region|gene3683-gene3684|||n.4053050A>G||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:10 1/1:43:34:17:17:36:94.44%:99:3.2089E-19:33:1:0:1:38 1/1:44:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:40:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:45:16:8:8:17:94.12%:81:7.7134E-9:32:1:0:1:18 1/1:42:13:6:7:14:92.86%:64:3.7391E-7:32:1:0:1:14 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 0/1:37:7:4:3:8:87.5%:31:6.993E-4:60:1:1:0:8 1/1:44:22:14:8:23:95.65%:99:2.9149E-12:31:1:0:1:26 0/1:45:6:3:3:7:85.71%:26:2.331E-3:24:1:1:0:8 0/1:43:14:10:4:16:87.5%:65:2.5454E-7:24:2:0:2:18 1/1:36:16:9:7:17:94.12%:81:7.7134E-9:44:1:0:1:18 1/1:48:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:43:13:8:5:14:92.86%:64:3.7391E-7:36:1:1:0:16 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:42:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:22:10:12:23:95.65%:99:2.9149E-12:32:1:1:0:24 1/1:44:12:3:9:12:100%:64:3.698E-7:0:0:0:0:13 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:45:11:4:7:12:91.67%:53:4.8074E-6:60:1:0:1:12 1/1:42:14:7:7:15:93.33%:69:1.0315E-7:25:1:0:1:15 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:20:9:11:21:95.24%:99:4.0873E-11:30:1:1:0:23 1/1:42:19:11:8:20:95%:98:1.5234E-10:38:1:0:1:23 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:29:11:18:31:93.55%:99:1.1344E-15:28:2:1:1:32 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:31:17:14:32:96.88%:99:1.8007E-17:37:1:0:1:34 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:19:9:10:20:95%:98:1.5234E-10:24:1:0:1:21 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:40:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:10:12:23:95.65%:99:2.9149E-12:23:1:0:1:25 1/1:40:27:10:17:29:93.1%:99:1.5465E-14:45:2:0:2:33 1/1:41:32:12:20:34:94.12%:99:2.2142E-17:48:2:1:1:37 1/1:43:20:10:10:21:95.24%:99:4.0873E-11:32:1:1:0:23 1/1:45:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:28:17:11:29:96.55%:99:9.9776E-16:31:1:1:0:32 1/1:45:18:7:11:19:94.74%:92:5.6585E-10:38:1:1:0:20 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:17 1/1:41:28:17:11:29:96.55%:99:9.9776E-16:23:1:0:1:30 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:47:13:8:5:14:92.86%:64:3.7391E-7:33:1:0:1:15 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:24:11:13:26:92.31%:99:7.6222E-13:31:2:1:1:29 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:37:19:18:38:97.37%:99:5.6582E-21:20:1:0:1:39 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:45:30:11:19:31:96.77%:99:6.8754E-17:24:1:1:0:32 1/1:48:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:15:7:8:16:93.75%:75:2.8282E-8:22:1:0:1:17 0/1:46:16:8:8:18:88.89%:76:2.0936E-8:26:2:0:2:18 1/1:45:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:50:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:49:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:47:18:6:12:19:94.74%:92:5.6585E-10:29:1:0:1:21 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:21 1/1:41:13:7:6:14:92.86%:64:3.7391E-7:29:1:0:1:14 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:50:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:33:17:16:34:97.06%:99:1.2301E-18:36:1:0:1:40 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:17:8:9:18:94.44%:86:2.0936E-9:29:1:0:1:21 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:18 1/1:43:17:7:10:18:94.44%:86:2.0936E-9:33:1:1:0:20 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:13:7:6:14:92.86%:64:3.7391E-7:22:1:1:0:15 1/1:42:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:40:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:14:8:6:15:93.33%:69:1.0315E-7:24:1:0:1:15 1/1:39:16:6:10:17:94.12%:81:7.7134E-9:23:1:0:1:19 1/1:43:33:10:23:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:16:7:9:17:94.12%:81:7.7134E-9:32:1:0:1:18 0/1:40:17:7:10:19:89.47%:82:5.9414E-9:36:2:2:0:21 1/1:41:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:37:22:8:14:23:95.65%:99:2.9149E-12:23:1:0:1:25 1/1:40:15:6:9:16:93.75%:75:2.8282E-8:34:1:1:0:18 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 0/1:36:9:4:5:11:81.82%:39:1.1057E-4:21:2:2:0:14 1/1:38:23:7:16:25:92%:99:2.7767E-12:27:2:0:2:27 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:11 0/1:40:10:3:7:12:83.33%:44:3.3652E-5:36:2:1:1:12 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:18:6:12:20:90%:87:1.6758E-9:30:2:0:2:22 1/1:39:22:8:14:24:91.67%:99:1.0078E-11:23:2:0:2:25 1/1:35:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:36:20:8:12:21:95.24%:99:4.0873E-11:37:1:0:1:24 1/1:37:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:24 0/1:38:11:4:7:13:84.62%:49:1.0096E-5:27:2:1:1:13 1/1:40:17:11:6:18:94.44%:86:2.0936E-9:36:1:1:0:18 1/1:36:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:25 1/1:38:15:2:13:16:93.75%:75:2.8282E-8:36:1:1:0:18 1/1:38:12:5:7:13:92.31%:58:1.3461E-6:32:1:1:0:13 1/1:39:12:6:6:13:92.31%:58:1.3461E-6:23:1:1:0:13 1/1:39:31:15:16:32:96.88%:99:1.8007E-17:32:1:0:1:37 1/1:43:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:25 1/1:43:22:11:11:24:91.67%:99:1.0078E-11:33:2:1:1:25 1/1:43:22:9:13:23:95.65%:99:2.9149E-12:35:1:0:1:26 1/1:44:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:17:5:12:18:94.44%:86:2.0936E-9:37:1:1:0:18 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:42:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:24:11:13:25:96%:99:2.0568E-13:36:1:0:1:26 1/1:42:20:8:12:21:95.24%:99:4.0873E-11:24:1:1:0:24 1/1:39:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:17 MTB_anc 4054637 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|espD_Rv3614c|gene3686|transcript|Transcript_gene3686|Coding|1/1|c.60C>T|p.Gly20Gly|60/555|60/555|20/184||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4054637G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4054637G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:51:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:49:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:52:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:50:17:33:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:51:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:50:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:60:33:27:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:50:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:52:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:49:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:48:20:28:48:100%:99:1.554E-28:0:0:0:0:52 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:44:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:70 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:46:14:32:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:70:32:38:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:44:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:20:13:7:21:95.24%:99:4.0873E-11:38:1:1:0:22 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:61:33:28:61:100%:99:2.609E-36:0:0:0:0:62 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 4056416 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|espA_Rv3616c-ephA_Rv3617|gene3688-gene3689|intergenic_region|gene3688-gene3689|||n.4056416A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:53:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:42:24:18:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:44:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:46:78:38:40:78:100%:99:1.7165E-46:0:0:0:0:78 1/1:45:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:28:17:11:29:96.55%:99:9.9776E-16:37:1:1:0:30 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:32:16:16:33:96.97%:99:4.7095E-18:39:1:0:1:33 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:45:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:66 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:63:28:35:63:100%:99:1.657E-37:0:0:0:0:65 1/1:40:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:43:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:44:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 4057846 . G A . PASS AC=12;AF=0.040;AN=300;ANN=A|synonymous_variant|LOW|ephA_Rv3617|gene3689|transcript|Transcript_gene3689|Coding|1/1|c.114G>A|p.Leu38Leu|114/969|114/969|38/322||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4057846G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.4057846G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:14:0%:25:1E0:50:14:11:3:14 0/0:0:0:0:0:48:0%:89:1E0:46:48:22:26:48 0/0:0:0:0:0:34:0%:62:1E0:49:34:15:19:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:17:10:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:38:0%:70:1E0:52:38:20:18:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:47:34:15:19:35 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:37 0/0:0:0:0:0:37:0%:70:1E0:51:37:20:17:37 0/0:0:0:0:0:48:0%:89:1E0:46:48:23:25:48 0/0:0:0:0:0:24:0%:44:1E0:48:24:16:8:24 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:43 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:44 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:20 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:57:0%:99:1E0:43:57:30:27:58 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:24 0/0:0:0:0:0:42:0%:77:1E0:47:42:24:18:42 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:44 0/0:0:0:0:0:21:0%:40:1E0:49:21:8:13:21 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:18 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:24 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:26 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:38:0%:70:1E0:49:38:17:21:38 0/0:0:0:0:0:29:0%:55:1E0:42:29:19:10:30 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 0/0:0:0:0:0:61:0%:99:1E0:46:61:36:25:62 0/0:0:0:0:0:44:0%:81:1E0:46:44:21:23:44 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:32 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:31 0/0:0:0:0:0:23:0%:44:1E0:44:23:17:6:24 0/0:0:0:0:0:21:0%:40:1E0:45:21:13:8:24 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:34:0%:62:1E0:44:34:26:8:35 0/0:0:0:0:0:36:0%:66:1E0:48:36:19:17:36 0/0:0:0:0:0:23:0%:44:1E0:54:23:9:14:23 0/0:0:0:0:0:33:0%:63:1E0:43:33:15:18:34 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:20:0%:36:1E0:42:20:6:14:20 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:44 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:15:13:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:35 0/0:0:0:0:0:41:0%:78:1E0:47:41:22:19:41 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:41 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:51 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:53:0%:99:1E0:47:53:27:26:53 0/0:0:0:0:0:49:0%:93:1E0:47:49:34:15:50 0/0:0:0:0:0:41:0%:78:1E0:47:41:26:15:41 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:23:0%:44:1E0:50:23:13:10:23 0/0:0:0:0:0:17:0%:33:1E0:46:17:11:6:17 0/0:0:0:0:0:38:0%:70:1E0:47:38:21:17:38 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:33 0/0:0:0:0:0:22:0%:40:1E0:51:22:10:12:22 0/0:0:0:0:0:38:0%:70:1E0:49:38:20:18:38 0/0:0:0:0:0:40:0%:74:1E0:42:40:28:12:42 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:49:39:16:23:40 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:31:0%:59:1E0:49:31:18:13:31 0/0:0:0:0:0:44:0%:81:1E0:40:44:22:22:45 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:34 0/0:0:0:0:0:36:0%:66:1E0:49:36:15:21:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:31 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:42 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:22:0%:40:1E0:47:22:14:8:22 0/0:0:0:0:0:43:0%:82:1E0:49:43:26:17:43 0/0:0:0:0:0:33:0%:63:1E0:48:33:19:14:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:25:15:40 0/0:60:1:1:0:24:4.17%:34:5E-1:52:23:13:10:25 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:40 0/0:60:1:0:1:37:2.7%:59:5E-1:45:36:18:18:37 0/0:0:0:0:0:53:0%:99:1E0:42:53:24:29:53 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:44:0%:81:1E0:41:44:28:16:45 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:37:19:18:38:97.37%:99:5.6582E-21:36:1:0:1:38 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:26:8:35 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:7:15:24 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:38 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:34 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:61:0%:99:1E0:41:61:35:26:61 0/0:0:0:0:0:59:0%:99:1E0:43:59:30:29:61 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:31 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:51 0/0:0:0:0:0:39:0%:74:1E0:42:39:27:12:39 0/0:0:0:0:0:63:0%:99:1E0:43:63:34:29:64 0/0:0:0:0:0:44:0%:81:1E0:40:44:25:19:46 0/0:0:0:0:0:54:0%:99:1E0:42:54:33:21:55 0/0:0:0:0:0:42:0%:77:1E0:43:42:28:14:48 0/0:0:0:0:0:49:0%:93:1E0:43:49:32:17:52 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:35 0/0:0:0:0:0:47:0%:89:1E0:42:47:20:27:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:33 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:39 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:39 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:34 0/0:0:0:0:0:49:0%:93:1E0:39:49:23:26:49 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:48:0%:89:1E0:42:48:21:27:48 0/0:34:2:1:1:44:4.55%:60:2.4713E-1:40:42:21:21:45 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:41:0%:78:1E0:45:41:16:25:42 0/0:0:0:0:0:37:0%:70:1E0:48:37:18:19:37 0/0:0:0:0:0:38:0%:70:1E0:47:38:15:23:41 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:27:0%:52:1E0:43:27:18:9:27 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:43 0/0:0:0:0:0:46:0%:85:1E0:48:46:18:28:48 0/0:0:0:0:0:47:0%:89:1E0:45:47:22:25:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 MTB_anc 4058524 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|ephA_Rv3617|gene3689|transcript|Transcript_gene3689|Coding|1/1|c.792T>C|p.Ile264Ile|792/969|792/969|264/322||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4058524T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.4058524T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:53:19:34:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:45:18:27:46:97.83%:99:1.1441E-25:38:1:0:1:46 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:12:17:30:96.67%:99:2.6212E-16:38:1:1:0:31 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:51:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:33:6:27:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:27 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 MTB_anc 4060100 . G A . PASS AC=294;AF=0.993;AN=296;ANN=A|synonymous_variant|LOW|esxV_Rv3619c|gene3691|transcript|Transcript_gene3691|Coding|1/1|c.169C>T|p.Leu57Leu|169/285|169/285|57/94||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4060100G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4060100G>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:49:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:45:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:52:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:45:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:49:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:9:5:4:10:90%:42:5.9538E-5:39:1:0:1:10 1/1:49:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:54:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 0/1:43:20:15:5:23:86.96%:95:3.1579E-10:50:3:1:2:24 1/1:42:16:4:12:17:94.12%:81:7.7134E-9:39:1:1:0:18 1/1:39:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:41:7:2:5:8:87.5%:31:6.993E-4:37:1:1:0:8 1/1:49:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:51:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:26:11:15:27:96.3%:99:1.4382E-14:39:1:0:1:27 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:40:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:13:7:6:14:92.86%:64:3.7391E-7:60:1:1:0:14 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:18:10:8:19:94.74%:92:5.6585E-10:33:1:1:0:21 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:16:9:7:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:52:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:43:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 MTB_anc 4060201 . G A . PASS AC=253;AF=0.996;AN=254;ANN=A|missense_variant|MODERATE|esxV_Rv3619c|gene3691|transcript|Transcript_gene3691|Coding|1/1|c.68C>T|p.Ser23Leu|68/285|68/285|23/94||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4060201G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4060201G>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:41:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:39:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:12 1/1:40:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:39:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:40:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:14:7:7:15:93.33%:69:1.0315E-7:38:1:0:1:15 1/1:36:10:3:7:11:90.91%:47:1.7011E-5:38:1:1:0:11 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:42:8:3:5:8:100%:41:7.77E-5:0:0:0:0:9 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:39:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:5:3:9:88.89%:36:2.0568E-4:38:1:1:0:9 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:40:10:2:8:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:40:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:38:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:33:18:15:34:97.06%:99:1.2301E-18:38:1:1:0:34 1/1:38:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:36:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:36:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:34:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:36:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:38:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:42:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 MTB_anc 4060230 . G A . PASS AC=250;AF=0.992;AN=252;ANN=A|synonymous_variant|LOW|esxV_Rv3619c|gene3691|transcript|Transcript_gene3691|Coding|1/1|c.39C>T|p.His13His|39/285|39/285|13/94||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4060230G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4060230G>A||||||;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:37:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:36:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:35:8:7:1:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:20:9:11:21:95.24%:99:4.0873E-11:37:1:1:0:21 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:15:8:7:16:93.75%:75:2.8282E-8:39:1:0:1:16 1/1:37:14:7:7:15:93.33%:69:1.0315E-7:37:1:1:0:15 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:12:7:5:13:92.31%:58:1.3461E-6:39:1:0:1:13 1/1:36:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:38:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:36:8:4:4:9:88.89%:36:2.0568E-4:39:1:1:0:9 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 0/1:35:8:5:3:9:88.89%:36:2.0568E-4:39:1:0:1:9 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:35:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:4:8:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:31:15:16:32:96.88%:99:1.8007E-17:38:1:1:0:32 1/1:36:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:37:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:37:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:36:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:38:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:15:7:8:16:93.75%:75:2.8282E-8:36:1:1:0:16 MTB_anc 4060562 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|synonymous_variant|LOW|esxW_Rv3620c|gene3692|transcript|Transcript_gene3692|Coding|1/1|c.30C>T|p.His10His|30/297|30/297|10/98||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4060562G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4060562G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:41:47:23:24:47 0/0:0:0:0:0:15:0%:29:1E0:52:15:4:11:15 0/0:0:0:0:0:52:0%:96:1E0:47:52:23:29:53 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:36:1:1:0:29:3.45%:45:5E-1:46:28:9:19:29 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:30:0%:55:1E0:51:30:13:17:30 0/0:0:0:0:0:23:0%:44:1E0:47:23:4:19:23 0/0:0:0:0:0:39:0%:74:1E0:50:39:18:21:39 0/0:0:0:0:0:37:0%:70:1E0:52:37:21:16:37 0/0:0:0:0:0:17:0%:33:1E0:44:17:6:11:17 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:43 0/0:0:0:0:0:16:0%:29:1E0:53:16:8:8:16 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:43:0%:82:1E0:49:43:17:26:43 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:17:0%:33:1E0:41:17:10:7:17 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:28 0/0:0:0:0:0:47:0%:89:1E0:47:47:23:24:48 0/0:0:0:0:0:27:0%:52:1E0:50:27:13:14:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:16 0/0:0:0:0:0:27:0%:52:1E0:49:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:17 0/0:0:0:0:0:30:0%:55:1E0:46:30:13:17:30 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:33:0%:63:1E0:49:33:15:18:33 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:41:0%:78:1E0:47:41:25:16:42 0/0:0:0:0:0:53:0%:99:1E0:49:53:22:31:55 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:39 0/0:0:0:0:0:46:0%:85:1E0:47:46:24:22:47 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:43:0%:82:1E0:45:43:14:29:43 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:40 0/0:0:0:0:0:41:0%:78:1E0:50:41:27:14:43 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:16 0/0:0:0:0:0:53:0%:99:1E0:45:53:25:28:53 0/0:0:0:0:0:21:0%:40:1E0:47:21:11:10:22 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:43 0/0:0:0:0:0:52:0%:96:1E0:40:52:25:27:54 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:24 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:37 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:38 0/0:0:0:0:0:42:0%:77:1E0:48:42:18:24:42 0/0:0:0:0:0:52:0%:96:1E0:44:52:30:22:52 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:28 0/0:0:0:0:0:46:0%:85:1E0:46:46:17:29:47 0/0:0:0:0:0:57:0%:99:1E0:47:57:20:37:57 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:39:0%:74:1E0:49:39:14:25:39 0/0:0:0:0:0:19:0%:37:1E0:48:19:11:8:19 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:34:0%:62:1E0:47:34:12:22:34 0/0:0:0:0:0:27:0%:52:1E0:53:27:17:10:27 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:41:0%:78:1E0:49:41:23:18:41 0/0:0:0:0:0:31:0%:59:1E0:44:31:8:23:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:22:0%:40:1E0:47:22:7:15:22 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:25:12:39 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:28 0/0:0:0:0:0:20:0%:36:1E0:51:20:11:9:21 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:38 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:20 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:37:0%:70:1E0:49:37:18:19:37 0/0:0:0:0:0:26:0%:47:1E0:48:26:10:16:28 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:26 0/0:0:0:0:0:44:0%:81:1E0:41:44:13:31:44 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:38:1:1:0:58:1.72%:94:5E-1:42:57:22:35:60 0/0:0:0:0:0:32:0%:59:1E0:42:32:10:22:32 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:44 0/0:0:0:0:0:36:0%:66:1E0:47:36:23:13:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:38 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:13:21:34 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:16:22:38 0/0:38:1:1:0:36:2.78%:55:5E-1:46:35:17:18:36 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:30:0%:55:1E0:42:30:10:20:30 0/0:0:0:0:0:50:0%:92:1E0:45:50:27:23:50 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:38 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:9:21:30 0/0:0:0:0:0:59:0%:99:1E0:41:59:24:35:59 0/0:0:0:0:0:59:0%:99:1E0:47:59:20:39:59 0/0:0:0:0:0:33:0%:63:1E0:39:33:12:21:34 0/0:0:0:0:0:20:0%:36:1E0:47:20:13:7:20 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:52 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:42 0/0:0:0:0:0:53:0%:99:1E0:42:53:21:32:54 0/0:0:0:0:0:42:0%:77:1E0:38:42:24:18:44 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:27:0%:52:1E0:39:27:7:20:27 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:43:0%:82:1E0:41:43:25:18:45 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:22:21:43 0/0:0:0:0:0:43:0%:82:1E0:41:43:18:25:43 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:59:0%:99:1E0:40:59:29:30:59 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:45 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:13:30:44 0/1:47:11:8:3:31:35.48%:37:1.6659E-4:46:20:9:11:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:25 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:37 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:22 0/0:0:0:0:0:40:0%:74:1E0:44:40:14:26:40 0/0:60:1:1:0:37:2.7%:59:5E-1:42:36:13:23:37 0/0:0:0:0:0:48:0%:89:1E0:44:48:21:27:48 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 MTB_anc 4061113 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|PPE65_Rv3621c|gene3693|transcript|Transcript_gene3693|Coding|1/1|c.777A>C|p.Ala259Ala|777/1242|777/1242|259/413||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4061113T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.4061113T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:50:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:30:15:15:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:51:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:30:12:18:31:96.77%:99:6.8754E-17:37:1:0:1:31 1/1:48:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:46:10:36:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:50:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:49:24:9:15:25:96%:99:2.0568E-13:38:1:1:0:26 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:26:9:17:27:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:50:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:44:36:19:17:37:97.3%:99:2.1762E-20:60:1:0:1:40 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:38:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:49:16:33:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:60:22:38:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:41:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 4063682 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|hpt_Rv3624c|gene3696|transcript|Transcript_gene3696|Coding|1/1|c.223C>A|p.Leu75Met|223/651|223/651|75/216||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4063682G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4063682G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:21:10:11:22:95.45%:99:1.0931E-11:60:1:0:1:23 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:57:28:29:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:48:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:60:31:29:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:53:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:54:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:54:24:30:55:98.18%:99:4.0229E-32:0:0:0:0:56 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:44:19:25:45:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:30:12:18:31:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:45:58:22:36:59:98.31%:99:2.4634E-33:39:1:0:1:60 1/1:43:70:29:41:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:60:36:24:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:49:17:32:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 MTB_anc 4065289 . G A . PASS AC=11;AF=0.037;AN=300;ANN=A|synonymous_variant|LOW|Rv3626c_Rv3626c|gene3698|transcript|Transcript_gene3698|Coding|1/1|c.615C>T|p.Asp205Asp|615/1053|615/1053|205/350||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4065289G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4065289G>A||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:41:46:18:28:47 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:25 0/0:0:0:0:0:41:0%:78:1E0:44:41:15:26:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:21:15:36 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:30 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:35:0%:67:1E0:45:35:22:13:35 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:46:0%:85:1E0:41:46:20:26:47 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:20 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:40 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:21:0%:40:1E0:44:21:7:14:23 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:11:24:36 0/0:0:0:0:0:22:0%:40:1E0:51:22:11:11:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:11:12:25 0/0:0:0:0:0:54:0%:99:1E0:41:54:22:32:56 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:43 0/0:0:0:0:0:33:0%:63:1E0:40:33:9:24:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:14:26:40 0/0:0:0:0:0:25:0%:48:1E0:39:25:16:9:26 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:24 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:7:20:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:54:0%:99:1E0:46:54:24:30:55 0/0:0:0:0:0:52:0%:96:1E0:43:52:23:29:52 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:46 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:35 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:35 0/0:0:0:0:0:17:0%:33:1E0:42:17:7:10:18 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:38 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:40 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:41 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:46:0%:85:1E0:40:46:21:25:47 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:22 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:39:1:1:0:33:3.03%:52:5E-1:42:32:16:16:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/1:43:11:5:6:40:27.5%:36:2.2064E-4:44:29:13:16:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:49 1/1:40:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:19 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:24:0%:44:1E0:51:24:12:12:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:43 0/0:0:0:0:0:33:0%:63:1E0:46:33:16:17:34 0/0:0:0:0:0:30:0%:55:1E0:40:30:9:21:30 0/0:0:0:0:0:44:0%:81:1E0:47:44:22:22:44 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:28 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:11:17:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:46 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:30 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:41:0%:78:1E0:40:41:12:29:42 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:39:0%:74:1E0:50:39:18:21:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:32 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:60:0%:99:1E0:39:60:20:40:60 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:45:0%:85:1E0:40:45:21:24:45 0/0:39:1:1:0:24:4.17%:34:5E-1:41:23:13:10:24 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:20 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:33 0/0:0:0:0:0:42:0%:77:1E0:39:42:11:31:43 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:43 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:25:0%:48:1E0:38:25:9:16:25 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:36 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:20 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:37 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:37 0/0:0:0:0:0:31:0%:59:1E0:37:31:13:18:31 0/0:0:0:0:0:22:0%:40:1E0:36:22:11:11:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:16:21:39 0/0:0:0:0:0:49:0%:93:1E0:39:49:18:31:50 0/0:0:0:0:0:39:0%:74:1E0:39:39:15:24:40 0/0:0:0:0:0:30:0%:55:1E0:40:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:41:23:8:15:24 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:50 0/0:0:0:0:0:56:0%:99:1E0:40:56:25:31:57 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:20 0/0:0:0:0:0:63:0%:99:1E0:37:63:29:34:64 0/0:0:0:0:0:42:0%:77:1E0:39:42:17:25:45 0/0:0:0:0:0:43:0%:82:1E0:39:43:13:30:45 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:41 0/0:0:0:0:0:45:0%:85:1E0:39:45:21:24:48 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:32 0/0:0:0:0:0:39:0%:74:1E0:38:39:17:22:42 0/0:0:0:0:0:40:0%:74:1E0:36:40:14:26:40 0/0:0:0:0:0:35:0%:67:1E0:40:35:11:24:35 0/0:0:0:0:0:48:0%:89:1E0:40:48:17:31:51 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:32:0%:59:1E0:37:32:16:16:33 0/0:0:0:0:0:61:0%:99:1E0:38:61:19:42:64 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:34 0/0:0:0:0:0:44:0%:81:1E0:39:44:19:25:47 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:46 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:46 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:29 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:34 0/0:0:0:0:0:35:0%:67:1E0:39:35:21:14:38 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:44 0/0:0:0:0:0:35:0%:67:1E0:38:35:11:24:36 0/0:0:0:0:0:59:0%:99:1E0:39:59:23:36:60 0/0:0:0:0:0:38:0%:70:1E0:41:38:13:25:38 MTB_anc 4067152 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv3627c_Rv3627c|gene3699|transcript|Transcript_gene3699|Coding|1/1|c.134T>C|p.Val45Ala|134/1386|134/1386|45/461||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.4067152A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4067152A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:38:19:19:39:97.44%:99:1.4697E-21:38:1:1:0:39 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:48:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:36:20:16:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:39:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:47:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:41:17:24:42:97.62%:99:2.5612E-23:37:1:1:0:43 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:52:13:39:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:37:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:63:20:43:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:47:13:34:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:37 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:37:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:41:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 4067866 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|synonymous_variant|LOW|ppa_Rv3628|gene3700|transcript|Transcript_gene3700|Coding|1/1|c.444A>G|p.Ala148Ala|444/489|444/489|148/162||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4067866A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4067866A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:48 0/0:0:0:0:0:14:0%:25:1E0:50:14:7:7:14 0/0:0:0:0:0:56:0%:99:1E0:44:56:22:34:59 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:23:0%:44:1E0:45:23:8:15:23 0/0:0:0:0:0:31:0%:59:1E0:50:31:14:17:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:40 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:11:23:34 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:17 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:48 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:38:1:0:1:33:3.03%:52:5E-1:45:32:16:16:34 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:47:27:11:16:27 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:22:0%:40:1E0:51:22:7:15:22 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:28 0/0:0:0:0:0:53:0%:99:1E0:42:53:26:27:55 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:24:0%:44:1E0:44:24:14:10:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:19:0%:37:1E0:48:19:13:6:19 0/0:0:0:0:0:19:0%:37:1E0:48:19:9:10:19 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:15:0%:29:1E0:41:15:7:8:15 0/0:0:0:0:0:34:0%:62:1E0:50:34:14:20:34 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:44:0%:81:1E0:47:44:18:26:44 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 0/0:0:0:0:0:30:0%:55:1E0:47:30:12:18:30 0/0:0:0:0:0:61:0%:99:1E0:45:61:29:32:61 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:60:0%:99:1E0:44:60:38:22:61 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:14:0%:25:1E0:38:14:8:6:15 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:12:25:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:41 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:20 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:42 0/0:37:1:0:1:23:4.35%:34:5E-1:46:22:14:8:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:15:22:37 0/0:0:0:0:0:19:0%:37:1E0:47:19:4:15:19 0/0:0:0:0:0:25:0%:48:1E0:45:25:17:8:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:46:0%:85:1E0:40:46:23:23:46 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:31:0%:59:1E0:43:31:12:19:32 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:50 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:41:36:19:17:36 0/0:0:0:0:0:66:0%:99:1E0:45:66:31:35:66 0/0:0:0:0:0:27:0%:52:1E0:46:27:8:19:27 0/0:0:0:0:0:40:0%:74:1E0:44:40:22:18:40 0/0:0:0:0:0:22:0%:40:1E0:46:22:18:4:22 0/0:0:0:0:0:18:0%:32:1E0:47:18:7:11:18 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:37 0/0:0:0:0:0:23:0%:44:1E0:48:23:9:14:23 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:8:17:26 0/0:0:0:0:0:31:0%:59:1E0:43:31:19:12:31 0/0:0:0:0:0:48:0%:89:1E0:40:48:29:19:48 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:23:0%:44:1E0:42:23:7:16:23 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:23:0%:44:1E0:47:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:23:0%:44:1E0:48:23:14:9:23 0/0:0:0:0:0:54:0%:99:1E0:41:54:23:31:55 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:21:0%:40:1E0:43:21:8:13:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:44 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:24 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:43 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:39 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:25 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:43:0%:82:1E0:46:43:19:24:44 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:46 0/0:0:0:0:0:59:0%:99:1E0:41:59:35:24:59 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:43:0%:82:1E0:47:43:16:27:44 0/0:0:0:0:0:32:0%:59:1E0:40:32:10:22:32 0/0:0:0:0:0:70:0%:99:1E0:43:70:33:37:71 0/0:0:0:0:0:58:0%:99:1E0:41:58:25:33:58 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:37 0/0:0:0:0:0:42:0%:77:1E0:41:42:25:17:43 0/0:0:0:0:0:48:0%:89:1E0:41:48:27:21:49 0/0:0:0:0:0:42:0%:77:1E0:38:42:23:19:42 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:41 0/0:0:0:0:0:49:0%:93:1E0:41:49:24:25:49 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:39 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:32 0/0:0:0:0:0:36:0%:66:1E0:39:36:19:17:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:32 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:47 0/0:0:0:0:0:44:0%:81:1E0:37:44:20:24:44 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:35 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:47 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:51 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:41 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:21 0/0:0:0:0:0:30:0%:55:1E0:42:30:15:15:32 0/0:0:0:0:0:42:0%:77:1E0:44:42:15:27:44 0/0:0:0:0:0:52:0%:96:1E0:42:52:29:23:53 0/0:0:0:0:0:18:0%:32:1E0:48:18:8:10:18 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:51 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:55:0%:99:1E0:40:55:23:32:55 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 MTB_anc 4078863 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3640c_Rv3640c|gene3711|transcript|Transcript_gene3711|Coding|1/1|c.887A>G|p.Glu296Gly|887/1230|887/1230|296/409||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4078863T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.4078863T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:52:19:11:8:20:95%:98:1.5234E-10:38:1:0:1:21 1/1:44:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:34:17:17:35:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:31:16:15:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:16:8:8:17:94.12%:87:1.6637E-9:0:0:0:0:17 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:12:18:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:51:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:17:15:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:40:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:24:12:12:25:96%:99:3.101E-14:0:0:0:0:25 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:18:13:5:19:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:29:13:16:30:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:49:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:22:11:11:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:14:11:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:62:36:26:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:42:25:17:43:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:63:34:29:63:100%:99:1.657E-37:0:0:0:0:64 1/1:44:73:36:37:73:100%:99:1.7006E-43:0:0:0:0:74 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:63:30:33:63:100%:99:1.657E-37:0:0:0:0:65 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:38 MTB_anc 4080853 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|intergenic_region|MODIFIER|Rv3642c_Rv3642c-Rv3643_Rv3643|gene3713-gene3714|intergenic_region|gene3713-gene3714|||n.4080853C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:51:0%:97:1E0:46:51:28:23:52 0/0:0:0:0:0:16:0%:29:1E0:54:16:8:8:16 0/0:0:0:0:0:47:0%:89:1E0:48:47:20:27:47 0/0:0:0:0:0:36:0%:66:1E0:50:36:20:16:36 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:26 0/0:0:0:0:0:42:0%:77:1E0:49:42:17:25:42 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:49:34:20:14:34 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:54:0%:99:1E0:45:54:28:26:54 0/0:0:0:0:0:28:0%:51:1E0:50:28:13:15:28 0/0:0:0:0:0:56:0%:99:1E0:47:56:19:37:57 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:48:35:22:13:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:30 0/0:0:0:0:0:25:0%:48:1E0:46:25:11:14:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:10:13:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:51:0%:97:1E0:43:51:27:24:51 0/0:0:0:0:0:31:0%:59:1E0:46:31:13:18:32 0/0:0:0:0:0:48:0%:89:1E0:45:48:23:25:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:39:1:0:1:31:3.23%:48:5E-1:46:30:14:16:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:37 0/0:0:0:0:0:39:0%:74:1E0:52:39:20:19:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:34:0%:62:1E0:48:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:63:0%:99:1E0:47:63:27:36:64 0/0:0:0:0:0:52:0%:96:1E0:44:52:31:21:52 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:44 0/0:0:0:0:0:25:0%:48:1E0:47:25:17:8:25 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:23 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:29 0/0:33:1:1:0:19:5.26%:28:5E-1:47:18:4:14:19 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:34:0%:62:1E0:42:34:13:21:34 0/0:0:0:0:0:42:0%:77:1E0:49:42:22:20:42 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:34 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:45:0%:85:1E0:43:45:17:28:45 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:20:0%:36:1E0:46:20:12:8:20 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:0:0:0:0:44:0%:81:1E0:48:44:28:16:44 0/0:0:0:0:0:29:0%:55:1E0:40:29:11:18:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:24:16:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:35 0/0:0:0:0:0:29:0%:55:1E0:50:29:19:10:30 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:53:0%:99:1E0:47:53:26:27:53 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:42:0%:77:1E0:46:42:27:15:42 0/0:0:0:0:0:12:0%:21:1E0:46:12:3:9:12 0/0:0:0:0:0:35:0%:67:1E0:46:35:10:25:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:49:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:49:25:10:15:25 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:37 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:38 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:35 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:25 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:38 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:32:0%:59:1E0:50:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:40:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:37:0%:70:1E0:49:37:24:13:37 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:28:0%:51:1E0:53:28:16:12:28 0/0:0:0:0:0:44:0%:81:1E0:46:44:29:15:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:52:0%:96:1E0:44:52:30:22:52 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:9:22:31 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:43:31:9:22:31 0/0:0:0:0:0:36:0%:66:1E0:46:36:25:11:38 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:46:35:19:16:35 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 0/0:37:1:0:1:43:2.33%:70:5E-1:45:42:27:15:43 0/0:0:0:0:0:27:0%:52:1E0:45:27:8:19:27 0/0:0:0:0:0:24:0%:44:1E0:43:24:12:12:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:28 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:45 0/0:0:0:0:0:45:0%:85:1E0:39:45:20:25:46 0/0:37:1:0:1:42:2.38%:66:5E-1:43:41:21:20:45 0/0:0:0:0:0:32:0%:59:1E0:47:32:17:15:32 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:24 0/0:0:0:0:0:63:0%:99:1E0:43:63:30:33:65 0/0:0:0:0:0:51:0%:97:1E0:42:51:32:19:52 0/0:0:0:0:0:21:0%:40:1E0:49:21:11:10:22 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:37:0%:70:1E0:42:37:15:22:41 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:39:1:0:1:51:1.96%:84:5E-1:41:50:25:25:53 0/0:0:0:0:0:44:0%:81:1E0:41:44:28:16:45 0/0:0:0:0:0:48:0%:89:1E0:39:48:31:17:49 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:53 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:39:0%:74:1E0:39:39:23:16:42 0/0:0:0:0:0:60:0%:99:1E0:40:60:35:25:62 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:44 0/0:0:0:0:0:46:0%:85:1E0:40:46:20:26:47 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:49:0%:93:1E0:40:49:25:24:49 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:24:11:36 0/0:0:0:0:0:51:0%:97:1E0:43:51:26:25:51 0/0:0:0:0:0:46:0%:85:1E0:44:46:27:19:46 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:42:0%:77:1E0:43:42:24:18:42 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:37 0/0:0:0:0:0:47:0%:89:1E0:41:47:28:19:47 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:12:21:33 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:61:0%:99:1E0:45:61:25:36:62 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:25 MTB_anc 4086802 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|topA_Rv3646c|gene3718|transcript|Transcript_gene3718|Coding|1/1|c.456C>T|p.His152His|456/2805|456/2805|152/934||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4086802G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.4086802G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:61:30:31:61:100%:99:2.609E-36:0:0:0:0:63 1/1:49:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:52:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:50:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:52:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:56:23:33:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:63:19:44:63:100%:99:1.657E-37:0:0:0:0:63 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:52:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:51:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:41:20:21:42:97.62%:99:2.3541E-24:0:0:0:0:44 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:48:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:49:17:32:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:45:22:23:46:97.83%:99:9.6314E-27:0:0:0:0:47 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 4088314 . C T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|intergenic_region|MODIFIER|Rv3647c_Rv3647c-cspA_Rv3648c|gene3719-gene3720|intergenic_region|gene3719-gene3720|||n.4088314C>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:47 0/0:0:0:0:0:21:0%:40:1E0:52:21:10:11:21 0/0:0:0:0:0:49:0%:93:1E0:46:49:23:26:49 0/0:0:0:0:0:17:0%:33:1E0:48:17:10:7:17 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:23 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:10:18:28 0/0:0:0:0:0:21:0%:40:1E0:48:21:12:9:21 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:19:0%:37:1E0:45:19:6:13:19 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:8:0%:14:1E0:51:8:1:7:8 0/0:0:0:0:0:44:0%:81:1E0:45:44:21:23:44 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:29 0/0:0:0:0:0:21:0%:40:1E0:46:21:14:7:24 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:26 0/0:0:0:0:0:14:0%:25:1E0:50:14:7:7:14 0/0:0:0:0:0:21:0%:40:1E0:45:21:8:13:23 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:22 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:40 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:41 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:28 0/0:0:0:0:0:18:0%:32:1E0:49:18:11:7:18 0/0:0:0:0:0:20:0%:36:1E0:47:20:9:11:20 0/0:0:0:0:0:32:0%:59:1E0:47:32:13:19:32 0/0:0:0:0:0:24:0%:44:1E0:46:24:8:16:25 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:50:32:14:18:32 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:39:0%:74:1E0:50:39:17:22:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:44:0%:81:1E0:48:44:19:25:45 0/0:0:0:0:0:50:0%:92:1E0:47:50:22:28:51 0/0:0:0:0:0:43:0%:82:1E0:43:43:26:17:44 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:37 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:18:8:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:15:11:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:30 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:39 0/0:0:0:0:0:40:0%:74:1E0:50:40:21:19:41 0/0:0:0:0:0:11:0%:22:1E0:43:11:2:9:13 0/0:0:0:0:0:40:0%:74:1E0:49:40:20:20:41 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:13:12:26 0/0:20:1:1:0:31:3.23%:48:5E-1:43:30:13:17:31 0/0:0:0:0:0:52:0%:96:1E0:41:52:28:24:52 0/0:0:0:0:0:38:0%:70:1E0:40:38:18:20:39 0/0:0:0:0:0:34:0%:62:1E0:44:34:22:12:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:40 0/0:0:0:0:0:34:0%:62:1E0:49:34:17:17:34 0/1:50:7:4:3:26:26.92%:23:4.9169E-3:44:19:12:7:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:38 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:35:0%:67:1E0:50:35:14:21:36 0/0:0:0:0:0:49:0%:93:1E0:45:49:19:30:50 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:34:0%:62:1E0:40:34:23:11:36 0/0:0:0:0:0:20:0%:36:1E0:51:20:12:8:20 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:19 0/0:0:0:0:0:31:0%:59:1E0:49:31:19:12:31 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:24:0%:44:1E0:49:24:9:15:24 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:16:22:39 0/0:0:0:0:0:21:0%:40:1E0:46:21:9:12:23 0/0:0:0:0:0:21:0%:40:1E0:41:21:8:13:22 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:31 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:24 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:48:0%:89:1E0:42:48:28:20:51 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:21 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:13:0%:25:1E0:36:13:6:7:13 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:16:0%:29:1E0:48:16:9:7:17 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:18:0%:32:1E0:51:18:9:9:18 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:49 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:0:0:0:0:49:0%:93:1E0:44:49:20:29:50 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:32 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:35 0/0:0:0:0:0:21:0%:40:1E0:41:21:13:8:22 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:34 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:32 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:29 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:39 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:19:19:39 0/0:0:0:0:0:39:0%:74:1E0:47:39:24:15:40 0/0:0:0:0:0:23:0%:44:1E0:39:23:17:6:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:43:0%:82:1E0:41:43:24:19:43 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:44 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:42 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:28 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:11:13:26 0/0:0:0:0:0:58:0%:99:1E0:43:58:34:24:60 0/0:0:0:0:0:63:0%:99:1E0:40:63:30:33:64 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:17 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:54:0%:99:1E0:41:54:29:25:55 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:37 0/0:0:0:0:0:57:0%:99:1E0:39:57:32:25:58 0/0:0:0:0:0:31:0%:59:1E0:40:31:22:9:36 0/0:0:0:0:0:41:0%:78:1E0:42:41:22:19:44 0/0:0:0:0:0:34:0%:62:1E0:38:34:16:18:37 0/0:0:0:0:0:45:0%:85:1E0:43:45:23:22:46 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:65:0%:99:1E0:41:65:34:31:69 0/0:0:0:0:0:48:0%:89:1E0:39:48:21:27:51 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:35 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:48:0%:89:1E0:38:48:21:27:49 0/0:0:0:0:0:53:0%:99:1E0:41:53:26:27:53 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:31 0/0:0:0:0:0:45:0%:85:1E0:40:45:22:23:46 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:28 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:24 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:8:24:32 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:27 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:35 0/0:0:0:0:0:44:0%:81:1E0:47:44:24:20:44 0/0:0:0:0:0:54:0%:99:1E0:41:54:31:23:55 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 MTB_anc 4089058 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv3649_Rv3649|gene3721|transcript|Transcript_gene3721|Coding|1/1|c.278C>T|p.Pro93Leu|278/2316|278/2316|93/771||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4089058C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.4089058C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:49:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:46:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:29:17:12:30:96.67%:99:2.6212E-16:37:1:0:1:31 1/1:50:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:69:38:31:69:100%:99:4.233E-41:0:0:0:0:69 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:39:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 1/1:39:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 MTB_anc 4093885 . C T . PASS AC=14;AF=0.047;AN=300;ANN=T|missense_variant|MODERATE|PE_PGRS60_Rv3652|gene3724|transcript|Transcript_gene3724|Coding|1/1|c.254C>T|p.Ala85Val|254/315|254/315|85/104||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4093885C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.4093885C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:41 0/0:0:0:0:0:8:0%:14:1E0:48:8:4:4:8 0/0:0:0:0:0:46:0%:85:1E0:46:46:26:20:46 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:22 0/0:0:0:0:0:23:0%:44:1E0:50:23:9:14:23 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:29 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:18:0%:32:1E0:48:18:11:7:19 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:41 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:30 0/0:0:0:0:0:15:0%:29:1E0:42:15:9:6:15 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:13:0%:25:1E0:43:13:7:6:13 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:24 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:49 0/0:0:0:0:0:18:0%:32:1E0:49:18:9:9:18 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:44 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:24 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:48 0/0:0:0:0:0:40:0%:74:1E0:44:40:26:14:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:36 0/0:0:0:0:0:20:0%:36:1E0:44:20:8:12:22 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:29 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:35 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:61:0%:99:1E0:46:61:33:28:61 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:45 0/0:0:0:0:0:43:0%:82:1E0:43:43:22:21:45 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:40 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:34 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:10:15:25 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:43:0%:82:1E0:41:43:26:17:44 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:33 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 0/0:0:0:0:0:38:0%:70:1E0:44:38:20:18:39 0/0:0:0:0:0:11:0%:22:1E0:48:11:4:7:11 0/0:0:0:0:0:35:0%:67:1E0:42:35:11:24:37 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:18 0/0:0:0:0:0:23:0%:44:1E0:42:23:8:15:23 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:32 0/0:0:0:0:0:48:0%:89:1E0:41:48:19:29:50 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:38 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:19 0/0:37:1:0:1:32:3.12%:48:5E-1:39:31:16:15:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:39 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:30 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:28 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:30 0/0:60:1:0:1:43:2.33%:70:5E-1:43:42:18:24:45 0/0:0:0:0:0:66:0%:99:1E0:43:66:33:33:68 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:24 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:37 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:21 0/0:0:0:0:0:9:0%:18:1E0:45:9:3:6:10 0/0:0:0:0:0:47:0%:89:1E0:43:47:25:22:48 0/0:0:0:0:0:26:0%:47:1E0:51:26:15:11:27 0/0:0:0:0:0:11:0%:22:1E0:53:11:3:8:11 0/0:0:0:0:0:14:0%:25:1E0:51:14:8:6:14 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:33 0/0:0:0:0:0:21:0%:40:1E0:49:21:8:13:21 0/0:0:0:0:0:42:0%:77:1E0:44:42:27:15:45 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:19:9:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:18:20:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:26 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:24 0/0:0:0:0:0:26:0%:47:1E0:36:26:10:16:26 0/0:0:0:0:0:24:0%:44:1E0:44:24:9:15:24 0/0:0:0:0:0:9:0%:18:1E0:46:9:4:5:9 0/0:0:0:0:0:25:0%:48:1E0:47:25:16:9:27 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:19 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:13:0%:25:1E0:49:13:7:6:13 0/0:0:0:0:0:40:0%:74:1E0:40:40:24:16:42 0/0:0:0:0:0:29:0%:55:1E0:41:29:19:10:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:45 0/0:0:0:0:0:19:0%:37:1E0:48:19:10:9:20 0/0:0:0:0:0:30:0%:55:1E0:38:30:17:13:31 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 0/0:0:0:0:0:27:0%:52:1E0:38:27:15:12:28 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:48:0%:89:1E0:39:48:29:19:50 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:27 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:25 1/1:45:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:60:1:1:0:45:2.22%:73:5E-1:43:44:24:20:46 0/0:0:0:0:0:22:0%:40:1E0:38:22:11:11:22 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:27 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:36 0/0:37:1:0:1:47:2.13%:77:5E-1:39:46:27:19:49 0/0:0:0:0:0:33:0%:63:1E0:38:33:18:15:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:24:0%:44:1E0:36:24:16:8:24 0/0:0:0:0:0:46:0%:85:1E0:45:46:27:19:48 0/0:0:0:0:0:49:0%:93:1E0:44:49:26:23:49 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:38:28:9:19:30 0/0:0:0:0:0:29:0%:55:1E0:38:29:12:17:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:39 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:25 0/0:0:0:0:0:23:0%:44:1E0:39:23:14:9:25 0/0:0:0:0:0:29:0%:55:1E0:37:29:8:21:30 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:27:0%:52:1E0:38:27:12:15:27 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:34 0/0:0:0:0:0:27:0%:52:1E0:36:27:8:19:28 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:26 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:23 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:48:0%:89:1E0:40:48:27:21:50 0/0:39:1:0:1:34:2.94%:51:5E-1:42:33:15:18:35 0/0:60:1:0:1:34:2.94%:51:5E-1:41:33:13:20:37 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:41 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:30 0/0:38:1:1:0:23:4.35%:34:5E-1:42:22:14:8:23 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:29:0%:55:1E0:37:29:14:15:30 0/0:0:0:0:0:15:0%:29:1E0:43:15:8:7:17 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:39:1:0:1:45:2.22%:73:5E-1:40:44:24:20:46 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:38 MTB_anc 4095001 . CA C . PASS AC=300;AF=1.00;AN=300;ANN=C|frameshift_variant|HIGH|Rv3655c_Rv3655c|gene3727|transcript|Transcript_gene3727|Coding|1/1|c.299delT|p.Leu100fs|299/378|299/378|100/125||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4095002delA||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4095002delA||||||;HET=0;HOM=1;LOF=(Rv3655c_Rv3655c|gene3727|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:50:25:12:13:26:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:44:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:28:13:15:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:13:15:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:12:19:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:15:9:6:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:36:21:15:36:97.3%:99:2.1762E-20:33:1:0:1:37 1/1:47:19:14:5:20:95%:98:1.5234E-10:30:1:1:0:20 1/1:44:39:17:22:37:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:24:8:16:26:92.31%:99:7.6222E-13:31:2:0:2:26 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:19:5:14:17:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:35:18:17:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:15:16:30:96.88%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:22:9:13:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:28:12:16:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:18:6:12:18:94.74%:92:5.6585E-10:60:1:0:1:19 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:16:17:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:14:15:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:20:11:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:44:17:27:42:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:59:33:26:58:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:35:22:13:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:41:17:24:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:34:17:17:34:97.14%:99:3.2089E-19:33:1:0:1:35 1/1:41:35:18:17:35:94.59%:99:4.2437E-19:46:2:1:1:37 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:45:24:21:42:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:33:20:13:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:19:10:9:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:34:17:17:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:36:16:20:36:97.3%:99:2.1762E-20:60:1:1:0:37 1/1:41:46:22:24:46:97.87%:99:2.9526E-26:37:1:1:0:47 1/1:40:41:18:23:39:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:44:25:10:15:25:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:47:34:10:24:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:37:18:19:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:32:12:20:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:20:10:10:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:46:23:23:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:12:8:4:13:100%:64:3.698E-7:0:0:0:0:13 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:50:24:26:51:98.04%:99:1.3013E-28:36:1:0:1:51 1/1:42:22:10:12:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:40:21:19:41:97.56%:99:9.8874E-23:31:1:1:0:41 1/1:41:37:25:12:37:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:42:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:45:24:21:44:97.83%:99:1.1441E-25:29:1:0:1:46 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:35:14:21:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:43:17:26:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:19:8:11:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:51:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:53:25:28:50:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:25:13:12:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:23:6:17:24:95.83%:99:7.7525E-13:34:1:0:1:24 1/1:36:32:15:17:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:34:16:18:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:16:16:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:14:20:35:97.14%:99:3.2089E-19:30:1:0:1:35 1/1:39:31:10:21:32:93.94%:99:8.2416E-17:29:2:1:1:33 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:16:15:31:96.88%:99:1.8007E-17:32:1:0:1:32 1/1:44:35:15:20:35:97.22%:99:8.3613E-20:65:1:1:0:36 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:33:19:14:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:13:12:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:25:13:12:26:96.15%:99:5.4444E-14:24:1:1:0:26 1/1:37:56:18:38:57:98.25%:99:3.7452E-32:32:1:0:1:57 1/1:38:36:15:21:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:27:15:12:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:48:27:21:50:96%:99:1.3143E-26:33:2:1:1:51 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:34:23:9:14:20:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:46:17:29:43:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:29:14:15:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:37:17:20:34:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:31:17:14:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:30:13:17:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:35:14:21:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:45:26:19:43:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:15:14:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:25:12:13:22:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:46:20:26:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:44:24:20:45:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:26:10:16:27:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:41:21:20:41:97.62%:99:2.5612E-23:24:1:1:0:42 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:44:23:21:45:97.78%:99:4.4304E-25:60:1:1:0:45 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:26:14:12:26:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:56:24:32:56:96.55%:99:3.7452E-32:33:1:0:1:57 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 4095295 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv3655c_Rv3655c|gene3727|transcript|Transcript_gene3727|Coding|1/1|c.6G>A|p.Glu2Glu|6/378|6/378|2/125||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4095295C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4095295C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:50:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:44:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:44:13:31:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:53:29:24:54:98.15%:99:2.2126E-30:32:1:0:1:55 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:43:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:68:35:33:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:41:20:21:42:97.62%:99:2.5612E-23:60:1:0:1:44 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 4101176 . ACGG A . PASS AC=61;AF=0.203;AN=300;ANN=A|intergenic_region|MODIFIER|MTS2823_RVnc0036a-Rv3662c_Rv3662c|gene3735-gene3736|intergenic_region|gene3735-gene3736|||n.4101177_4101179delCGG||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:38:47:27:20:51 0/0:0:0:0:0:15:0%:29:1E0:40:15:10:5:17 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:36 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:26 1/1:35:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 0/1:37:20:11:9:21:86.96%:95:3.1579E-10:34:3:1:2:23 0/0:0:0:0:0:24:0%:44:1E0:46:24:16:8:25 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:18 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:35 1/1:34:23:14:9:21:95.83%:99:7.7525E-13:34:1:0:1:24 0/0:0:0:0:0:37:0%:70:1E0:36:37:29:8:38 0/0:0:0:0:0:8:0%:14:1E0:39:8:7:1:9 0/0:0:0:0:0:42:0%:77:1E0:39:42:31:11:43 0/0:0:0:0:0:28:0%:51:1E0:38:28:19:9:28 0/0:0:0:0:0:26:0%:47:1E0:38:26:22:4:29 0/0:0:0:0:0:20:0%:36:1E0:38:20:14:6:21 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:18 0/1:37:18:11:7:19:85.71%:84:3.7603E-9:36:3:2:1:21 0/0:0:0:0:0:16:0%:29:1E0:39:16:10:6:18 0/0:0:0:0:0:23:0%:44:1E0:37:23:15:8:25 0/0:0:0:0:0:45:0%:85:1E0:38:45:32:13:46 0/0:0:0:0:0:22:0%:40:1E0:39:22:18:4:23 0/0:0:0:0:0:34:0%:62:1E0:40:34:21:13:37 0/0:0:0:0:0:35:0%:67:1E0:38:35:28:7:37 1/1:34:18:11:7:18:94.74%:92:5.6585E-10:37:1:1:0:19 0/0:0:0:0:0:24:0%:44:1E0:40:24:16:8:25 0/1:40:17:10:7:19:89.47%:82:5.9414E-9:48:2:2:0:19 0/0:0:0:0:0:25:0%:48:1E0:38:25:14:11:27 1/1:35:22:9:13:21:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:36:0%:66:1E0:37:36:28:8:38 0/0:0:0:0:0:25:0%:48:1E0:38:25:17:8:27 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:37:25:14:11:26 0/0:0:0:0:0:29:0%:55:1E0:37:29:21:8:29 0/0:0:0:0:0:27:0%:52:1E0:38:27:21:6:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:31 0/0:0:0:0:0:50:0%:92:1E0:39:50:32:18:53 0/0:0:0:0:0:34:0%:62:1E0:38:34:21:13:34 0/0:0:0:0:0:39:0%:74:1E0:43:39:25:14:42 0/0:0:0:0:0:18:0%:32:1E0:36:18:11:7:21 0/0:0:0:0:0:35:0%:67:1E0:39:35:25:10:37 0/0:0:0:0:0:15:0%:29:1E0:40:15:8:7:15 0/0:0:0:0:0:26:0%:47:1E0:38:26:22:4:28 1/1:34:36:21:15:33:97.3%:99:2.1762E-20:32:1:0:1:37 0/0:0:0:0:0:32:0%:59:1E0:37:32:21:11:35 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:25 0/0:0:0:0:0:50:0%:92:1E0:37:50:38:12:51 0/0:0:0:0:0:39:0%:74:1E0:38:39:29:10:43 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:41 0/0:0:0:0:0:20:0%:36:1E0:40:20:13:7:21 0/0:55:1:0:1:36:2.78%:55:5E-1:37:35:25:10:38 0/0:0:0:0:0:20:0%:36:1E0:39:20:16:4:20 0/0:0:0:0:0:26:0%:47:1E0:39:26:17:9:27 0/0:0:0:0:0:18:0%:32:1E0:37:18:11:7:18 0/0:0:0:0:0:38:0%:70:1E0:35:38:26:12:41 0/0:0:0:0:0:30:0%:55:1E0:36:30:24:6:34 0/0:0:0:0:0:13:0%:25:1E0:37:13:8:5:15 0/0:0:0:0:0:37:0%:70:1E0:36:37:27:10:40 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:35 1/1:36:21:13:8:19:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:32:0%:59:1E0:39:32:22:10:35 0/0:0:0:0:0:24:0%:44:1E0:36:24:20:4:25 1/1:39:29:16:13:30:93.55%:99:1.1344E-15:34:2:1:1:32 1/1:37:29:15:14:30:93.55%:99:1.1344E-15:48:2:2:0:31 1/1:38:33:21:12:34:91.67%:99:2.0653E-17:32:3:2:1:36 1/1:38:20:15:5:21:90.91%:98:1.3117E-10:35:2:1:1:22 1/1:40:39:24:15:39:95.12%:99:2.1258E-21:31:2:2:0:41 0/0:0:0:0:0:8:0%:14:1E0:42:8:5:3:9 0/0:0:0:0:0:16:0%:29:1E0:36:16:10:6:16 0/0:29:1:1:0:28:3.57%:41:5E-1:37:27:18:9:28 1/1:37:21:13:8:21:91.3%:99:3.6437E-11:60:2:1:1:23 0/0:0:0:0:0:14:0%:25:1E0:43:14:11:3:14 1/1:40:22:11:11:24:91.67%:99:1.0078E-11:32:2:1:1:24 1/1:39:35:22:13:37:92.11%:99:1.5466E-18:41:3:2:1:38 0/0:0:0:0:0:32:0%:59:1E0:38:32:23:9:32 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:29 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:39 0/0:0:0:0:0:29:0%:55:1E0:36:29:22:7:30 0/0:0:0:0:0:25:0%:48:1E0:38:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:33 1/1:36:41:28:13:41:93.18%:99:6.1775E-22:33:3:0:3:44 0/0:0:0:0:0:34:0%:62:1E0:36:34:25:9:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 1/1:32:25:16:9:24:92.59%:99:2.0853E-13:34:2:1:1:27 0/0:0:0:0:0:28:0%:51:1E0:37:28:18:10:29 0/0:0:0:0:0:22:0%:40:1E0:40:22:15:7:22 0/0:0:0:0:0:18:0%:32:1E0:40:18:9:9:18 0/0:0:0:0:0:24:0%:44:1E0:41:24:14:10:24 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:27 1/1:38:28:14:14:27:90.32%:99:1.2857E-14:32:3:2:1:31 0/0:0:0:0:0:21:0%:40:1E0:39:21:13:8:23 0/0:0:0:0:0:35:0%:67:1E0:38:35:28:7:37 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:23 0/0:0:0:0:0:32:0%:59:1E0:36:32:24:8:34 0/0:0:0:0:0:20:0%:36:1E0:38:20:14:6:21 0/0:0:0:0:0:15:0%:29:1E0:38:15:12:3:21 0/0:0:0:0:0:27:0%:52:1E0:37:27:21:6:28 1/1:37:28:20:8:29:93.33%:99:4.194E-15:33:2:0:2:30 0/0:0:0:0:0:35:0%:67:1E0:36:35:27:8:39 0/0:0:0:0:0:24:0%:44:1E0:38:24:14:10:25 0/0:0:0:0:0:32:0%:59:1E0:37:32:25:7:35 1/1:36:33:28:5:31:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:18:0%:32:1E0:37:18:17:1:21 0/0:0:0:0:0:16:0%:29:1E0:34:16:11:5:18 0/0:0:0:0:0:29:0%:55:1E0:39:29:22:7:30 0/0:0:0:0:0:23:0%:44:1E0:37:23:17:6:24 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:27 0/0:0:0:0:0:24:0%:44:1E0:38:24:21:3:25 0/0:0:0:0:0:32:0%:59:1E0:37:32:22:10:33 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:18 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:28 0/0:0:0:0:0:18:0%:32:1E0:39:18:12:6:21 0/0:0:0:0:0:33:0%:63:1E0:37:33:21:12:35 0/0:0:0:0:0:20:0%:36:1E0:35:20:15:5:21 0/0:0:0:0:0:37:0%:70:1E0:35:37:26:11:39 0/0:0:0:0:0:26:0%:47:1E0:37:26:18:8:28 0/1:35:35:20:15:36:89.74%:99:4.5343E-18:33:4:2:2:39 0/0:0:0:0:0:27:0%:52:1E0:36:27:21:6:28 0/0:0:0:0:0:43:0%:82:1E0:37:43:22:21:45 1/1:35:38:18:20:34:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:23:0%:44:1E0:39:23:19:4:24 0/0:0:0:0:0:25:0%:48:1E0:37:25:16:9:26 1/1:36:28:23:5:29:93.33%:99:4.194E-15:33:2:0:2:30 0/0:0:0:0:0:32:0%:59:1E0:37:32:27:5:35 0/0:0:0:0:0:36:0%:66:1E0:37:36:28:8:40 0/0:0:0:0:0:28:0%:51:1E0:35:28:18:10:31 0/0:0:0:0:0:33:0%:63:1E0:37:33:27:6:35 0/0:0:0:0:0:20:0%:36:1E0:34:20:13:7:24 0/0:0:0:0:0:32:0%:59:1E0:37:32:24:8:35 0/0:0:0:0:0:28:0%:51:1E0:36:28:19:9:29 1/1:38:29:25:4:30:96.67%:99:2.6212E-16:60:1:1:0:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:19:7:28 0/1:34:27:15:12:30:81.82%:99:4.5192E-13:34:6:3:3:33 1/1:34:25:22:3:25:92.59%:99:2.0853E-13:33:2:0:2:27 0/1:34:25:14:11:28:86.21%:99:1.3609E-12:32:4:3:1:29 0/0:0:0:0:0:31:0%:59:1E0:35:31:23:8:33 0/0:0:0:0:0:31:0%:59:1E0:36:31:23:8:32 0/0:0:0:0:0:27:0%:52:1E0:35:27:19:8:30 1/1:35:30:23:7:29:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:36:33:19:14:33:94.29%:99:5.9366E-18:35:2:1:1:35 0/0:0:0:0:0:16:0%:29:1E0:37:16:14:2:19 1/1:38:29:15:14:30:96.67%:99:2.6212E-16:32:1:0:1:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:13:13:28 0/0:0:0:0:0:27:0%:52:1E0:39:27:20:7:29 0/0:0:0:0:0:20:0%:36:1E0:35:20:14:6:21 0/1:38:24:13:11:26:88.89%:99:2.0853E-12:34:3:1:2:27 1/1:35:27:23:4:27:96.43%:99:3.7915E-15:37:1:1:0:28 0/0:0:0:0:0:30:0%:55:1E0:37:30:21:9:32 0/0:0:0:0:0:24:0%:44:1E0:36:24:20:4:29 MTB_anc 4101964 . G A . PASS AC=298;AF=1.00;AN=298;ANN=A|synonymous_variant|LOW|Rv3662c_Rv3662c|gene3736|transcript|Transcript_gene3736|Coding|1/1|c.72C>T|p.Asp24Asp|72/771|72/771|24/256||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4101964G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4101964G>A||||||;HET=0;WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:50:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:37:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:25:7:18:26:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:14:8:6:15:93.33%:76:2.4927E-8:0:0:0:0:16 1/1:44:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:38:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:38:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:33 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:41:19:22:42:100%:99:2.3541E-24:0:0:0:0:44 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:43:22:21:44:97.73%:99:1.7144E-24:38:1:1:0:47 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 4105757 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|dppA_Rv3666c|gene3740|transcript|Transcript_gene3740|Coding|1/1|c.1328A>G|p.Gln443Arg|1328/1626|1328/1626|443/541||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4105757T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4105757T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:48:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:49:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:67 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:50:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:66:41:25:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:17:9:8:18:94.44%:93:4.2852E-10:0:0:0:0:18 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:29:14:15:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:41:41:16:25:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:13:12:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:61:26:35:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:27:16:11:28:96.43%:99:5.1363E-16:0:0:0:0:29 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:62:39:23:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:16:15:31:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:24:12:12:25:96%:99:3.101E-14:0:0:0:0:32 1/1:39:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:58:32:26:59:98.31%:99:1.6283E-34:0:0:0:0:61 1/1:42:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:48:25:23:49:97.96%:99:1.554E-28:0:0:0:0:49 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 4107074 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|dppA_Rv3666c|gene3740|transcript|Transcript_gene3740|Coding|1/1|c.11G>A|p.Arg4Gln|11/1626|11/1626|4/541||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4107074C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4107074C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:27:15:12:28:96.43%:99:3.7915E-15:60:1:0:1:29 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:49:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:15:13:29:96.55%:99:9.9776E-16:35:1:0:1:30 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:27:13:14:28:96.43%:99:3.7915E-15:39:1:1:0:29 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:70:40:30:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:60:30:30:60:100%:99:1.035E-35:0:0:0:0:61 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:46:22:24:47:97.87%:99:2.9526E-26:38:1:0:1:47 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:46:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:44:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:45:13:32:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 4110575 . A G . PASS AC=4;AF=0.013;AN=300;ANN=G|intergenic_region|MODIFIER|Rv3668c_Rv3668c-Rv3669_Rv3669|gene3742-gene3743|intergenic_region|gene3742-gene3743|||n.4110575A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 0/0:0:0:0:0:22:0%:40:1E0:49:22:14:8:23 0/0:0:0:0:0:45:0%:85:1E0:46:45:30:15:48 0/0:0:0:0:0:26:0%:47:1E0:45:26:9:17:27 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:26 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:29:0%:55:1E0:46:29:22:7:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:43:0%:82:1E0:49:43:27:16:45 0/0:0:0:0:0:53:0%:99:1E0:42:53:23:30:54 0/0:0:0:0:0:20:0%:36:1E0:47:20:13:7:20 0/0:39:1:0:1:52:1.92%:83:5E-1:46:51:27:24:53 0/0:0:0:0:0:24:0%:44:1E0:43:24:16:8:25 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:31 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:26 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:16:12:29 0/0:0:0:0:0:63:0%:99:1E0:42:63:36:27:63 0/0:0:0:0:0:29:0%:55:1E0:46:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:47:38:25:13:38 0/0:0:0:0:0:27:0%:52:1E0:41:27:10:17:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:40 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:26 0/0:0:0:0:0:33:0%:63:1E0:45:33:11:22:33 0/0:0:0:0:0:38:0%:70:1E0:43:38:27:11:40 0/0:0:0:0:0:48:0%:89:1E0:45:48:26:22:49 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:34 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:59:0%:99:1E0:45:59:35:24:60 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:58:0%:99:1E0:44:58:26:32:58 0/0:0:0:0:0:50:0%:92:1E0:42:50:31:19:50 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:38 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:38:0%:70:1E0:42:38:23:15:38 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:51 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:47 0/0:0:0:0:0:42:0%:77:1E0:48:42:22:20:43 0/0:0:0:0:0:22:0%:40:1E0:46:22:14:8:22 1/1:43:40:18:22:41:97.56%:99:9.8874E-23:39:1:1:0:41 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:27 0/0:0:0:0:0:44:0%:81:1E0:40:44:18:26:44 0/0:0:0:0:0:22:0%:40:1E0:39:22:11:11:22 0/0:0:0:0:0:50:0%:92:1E0:41:50:26:24:50 0/0:0:0:0:0:45:0%:85:1E0:41:45:28:17:45 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:28 0/0:0:0:0:0:50:0%:92:1E0:44:50:22:28:50 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:37 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:32 0/0:0:0:0:0:45:0%:85:1E0:42:45:25:20:46 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:41 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:32 0/0:0:0:0:0:65:0%:99:1E0:43:65:36:29:71 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:28 0/0:0:0:0:0:41:0%:78:1E0:45:41:21:20:41 0/0:0:0:0:0:27:0%:52:1E0:48:27:15:12:27 0/0:0:0:0:0:19:0%:37:1E0:48:19:13:6:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:38:0%:70:1E0:46:38:23:15:38 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:31:0%:59:1E0:50:31:15:16:31 0/0:0:0:0:0:43:0%:82:1E0:40:43:26:17:44 0/0:0:0:0:0:39:0%:74:1E0:39:39:19:20:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:23:10:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:15:12:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:0:47:0%:89:1E0:44:47:26:21:47 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:23:13:37 0/0:0:0:0:0:24:0%:44:1E0:44:24:7:17:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:30 0/0:0:0:0:0:18:0%:32:1E0:47:18:9:9:18 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:32 0/0:0:0:0:0:19:0%:37:1E0:43:19:8:11:19 0/0:0:0:0:0:36:0%:66:1E0:46:36:20:16:38 0/0:0:0:0:0:27:0%:52:1E0:46:27:11:16:27 0/0:0:0:0:0:49:0%:93:1E0:43:49:24:25:50 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:32 0/0:0:0:0:0:56:0%:99:1E0:40:56:33:23:56 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:31 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:30 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:41:0%:78:1E0:42:41:28:13:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:35:0%:67:1E0:39:35:13:22:37 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:37 1/1:41:34:19:15:35:97.14%:99:3.2089E-19:37:1:0:1:35 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:19:0%:37:1E0:42:19:13:6:19 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:34:0%:62:1E0:41:34:15:19:34 0/0:0:0:0:0:43:0%:82:1E0:47:43:18:25:43 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:40:22:12:10:22 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:51:0%:97:1E0:42:51:33:18:52 0/0:0:0:0:0:49:0%:93:1E0:40:49:29:20:50 0/0:0:0:0:0:39:0%:74:1E0:39:39:23:16:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 0/0:0:0:0:0:70:0%:99:1E0:42:70:34:36:70 0/0:0:0:0:0:73:0%:99:1E0:41:73:38:35:74 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:31 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:25 0/0:0:0:0:0:60:0%:99:1E0:38:60:38:22:61 0/0:0:0:0:0:43:0%:82:1E0:39:43:27:16:48 0/0:0:0:0:0:52:0%:96:1E0:38:52:32:20:55 0/0:0:0:0:0:48:0%:89:1E0:39:48:22:26:50 0/0:0:0:0:0:44:0%:81:1E0:41:44:25:19:46 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:37 0/0:0:0:0:0:42:0%:77:1E0:43:42:27:15:43 0/0:0:0:0:0:34:0%:62:1E0:37:34:17:17:36 0/0:0:0:0:0:46:0%:85:1E0:38:46:33:13:49 0/0:0:0:0:0:38:0%:70:1E0:40:38:22:16:39 0/0:0:0:0:0:55:0%:99:1E0:40:55:33:22:56 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:32 0/0:0:0:0:0:41:0%:78:1E0:41:41:17:24:41 0/0:0:0:0:0:48:0%:89:1E0:38:48:26:22:49 0/0:0:0:0:0:52:0%:96:1E0:43:52:27:25:53 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:41 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:41 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:30 0/0:0:0:0:0:21:0%:40:1E0:40:21:13:8:21 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:55 0/0:0:0:0:0:48:0%:89:1E0:42:48:18:30:49 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:33 0/0:0:0:0:0:47:0%:89:1E0:40:47:30:17:47 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:40 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:44 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:29 MTB_anc 4112429 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv3671c_Rv3671c|gene3745|transcript|Transcript_gene3745|Coding|1/1|c.1087G>A|p.Val363Ile|1087/1194|1087/1194|363/397||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4112429C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4112429C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:61:30:31:61:100%:99:2.609E-36:0:0:0:0:61 1/1:53:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:46:49:24:25:49:100%:99:3.925E-29:0:0:0:0:52 1/1:53:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:45:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:52:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:60:29:31:60:100%:99:1.035E-35:0:0:0:0:61 1/1:47:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:51:35:16:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:50:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:53:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:48:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:54:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:60 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:47:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:61:39:22:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 MTB_anc 4116682 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|crp_Rv3676|gene3750|transcript|Transcript_gene3750|Coding|1/1|c.205C>T|p.Leu69Leu|205/675|205/675|69/224||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Uncertain_essentiality_in_vitro|||n.4116682C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.4116682C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:49:20:29:49:100%:99:3.925E-29:0:0:0:0:50 1/1:48:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:67:29:38:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:48:38:18:20:39:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:59:37:22:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:35:25:10:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:48:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:13:3:10:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:58:18:40:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:49:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:53:38:15:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:52:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:42:16:26:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:43:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:46:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:51 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:65:32:33:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:63:26:37:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 4117161 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|crp_Rv3676-Rv3677c_Rv3677c|gene3750-gene3751|intergenic_region|gene3750-gene3751|||n.4117161A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:48:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:54:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:10:17:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:51:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:58:20:38:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:52:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:61:31:30:61:100%:99:2.609E-36:0:0:0:0:62 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:47:14:33:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:48:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:54:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:37:16:21:38:97.37%:99:5.6582E-21:33:1:0:1:39 1/1:45:33:15:18:34:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:53:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:41:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:38:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:40:10:30:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 MTB_anc 4117167 . GGC G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|crp_Rv3676-Rv3677c_Rv3677c|gene3750-gene3751|intergenic_region|gene3750-gene3751|||n.4117168_4117169delGC||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:52:27:25:51:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:15:9:6:13:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:56:22:34:54:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:27:13:14:28:96.43%:99:3.7915E-15:32:1:0:1:28 1/1:47:33:16:17:32:97.06%:99:1.2301E-18:34:1:1:0:34 1/1:50:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:53:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:52:23:29:50:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:20:11:9:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:58:29:29:57:98.31%:99:2.4634E-33:35:1:0:1:59 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:21:11:10:22:95.45%:99:1.0931E-11:60:1:0:1:22 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:61:21:40:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:23:9:14:22:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:14:18:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:51:33:14:19:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:17:10:7:18:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:49:18:12:6:18:94.74%:92:5.6585E-10:37:1:1:0:19 1/1:48:29:14:15:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:29:16:13:29:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:32:12:20:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:13:7:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:26:11:15:27:96.3%:99:1.4382E-14:31:1:1:0:27 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:61:31:30:59:100%:99:2.609E-36:0:0:0:0:61 1/1:44:34:17:17:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:48:14:34:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:29:9:20:29:96.67%:99:2.6212E-16:34:1:1:0:30 1/1:44:36:20:16:36:97.3%:99:2.1762E-20:33:1:0:1:37 1/1:44:30:10:20:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:23:14:9:25:92%:99:2.7767E-12:35:2:1:1:25 1/1:42:38:18:20:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:51:26:25:52:98.08%:99:3.3479E-29:60:1:1:0:52 1/1:45:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:33:12:21:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:47:27:15:12:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:26:17:9:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:10:13:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:44:20:24:45:95.65%:99:2.7459E-24:33:2:1:1:46 1/1:41:41:19:22:41:97.62%:99:2.5612E-23:37:1:1:0:42 1/1:49:22:10:12:22:95.65%:99:2.9149E-12:32:1:0:1:23 1/1:42:54:28:26:54:98.18%:99:5.6837E-31:37:1:1:0:55 1/1:47:32:19:13:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:15:18:33:97.06%:99:1.2301E-18:34:1:1:0:34 1/1:43:44:17:27:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:46:26:20:45:97.87%:99:2.9526E-26:34:1:0:1:47 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:48:21:27:49:97.96%:99:1.9625E-27:34:1:1:0:49 1/1:44:55:23:32:54:96.49%:99:1.1048E-30:35:2:2:0:57 1/1:53:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:22:11:11:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:14:15:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:19:8:11:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:17:20:38:97.37%:99:5.6582E-21:37:1:0:1:38 1/1:46:32:15:17:34:94.12%:99:4.7095E-18:34:1:0:1:34 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:25:11:14:25:96.15%:99:5.4444E-14:60:1:0:1:26 1/1:44:35:17:18:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:46:25:21:46:97.87%:99:2.9526E-26:33:1:1:0:47 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:12:15:26:96.43%:99:3.7915E-15:63:1:1:0:28 1/1:40:44:20:24:45:95.65%:99:2.7459E-24:48:2:2:0:46 1/1:43:28:14:14:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:12:18:31:96.77%:99:6.8754E-17:34:1:1:0:31 1/1:46:36:19:17:37:97.3%:99:2.1762E-20:60:1:1:0:37 1/1:49:30:13:17:31:96.77%:99:6.8754E-17:34:1:1:0:31 1/1:48:23:8:15:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:51:19:32:51:96.23%:99:2.5024E-30:0:0:0:0:53 1/1:46:32:13:19:33:94.12%:99:2.2142E-17:33:2:1:1:34 1/1:39:42:17:25:40:95.45%:99:6.6289E-24:60:1:1:0:43 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:31:13:18:29:96.88%:99:1.8007E-17:31:1:1:0:32 1/1:41:29:14:15:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:29:17:12:28:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:48:28:16:12:28:93.33%:99:4.194E-15:46:2:0:2:30 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:30:15:15:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:41:25:15:10:24:96.15%:99:5.4444E-14:36:1:1:0:26 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:35:17:18:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:12:16:29:96.55%:99:9.9776E-16:60:1:1:0:29 1/1:43:29:16:13:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:43:20:23:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:27:15:12:29:93.1%:99:1.5465E-14:46:2:1:1:29 1/1:45:26:11:15:27:96.3%:99:1.4382E-14:34:1:1:0:27 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:31:15:16:29:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:51:30:21:51:98.08%:99:3.3479E-29:33:1:1:0:52 1/1:41:31:14:17:29:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:17:14:32:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:40:42:19:23:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:55:30:25:54:98.21%:99:1.4593E-31:33:1:1:0:56 1/1:42:52:23:29:50:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:30:10:20:31:96.77%:99:6.8754E-17:35:1:0:1:31 1/1:40:29:17:12:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:38:41:27:14:38:95.35%:99:1.4915E-22:43:2:2:0:43 1/1:41:56:21:35:56:96.55%:99:2.8822E-31:31:2:1:1:58 1/1:38:40:16:24:38:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:41:23:18:42:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:43:33:17:16:35:94.29%:99:5.9366E-18:29:2:2:0:35 1/1:42:41:11:30:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:48:20:28:46:100%:99:1.554E-28:0:0:0:0:48 1/1:41:44:21:23:45:97.78%:99:4.4304E-25:37:1:0:1:45 1/1:39:41:22:19:38:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:38:20:18:36:97.44%:99:1.4697E-21:28:1:1:0:39 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:29:13:16:28:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:41:47:27:20:48:95.92%:99:5.0044E-26:33:2:1:1:50 1/1:44:36:15:21:37:97.3%:99:2.1762E-20:60:1:0:1:37 1/1:41:33:10:23:35:94.29%:99:5.9366E-18:33:2:0:2:35 1/1:43:34:16:18:35:97.14%:99:3.2089E-19:35:1:1:0:35 1/1:46:32:16:16:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:36:18:18:37:97.3%:99:2.1762E-20:32:1:0:1:37 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:28:13:15:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:41:19:7:12:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:31:14:17:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:45:47:21:26:46:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:41:17:24:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:39:17:22:40:95.12%:99:2.1258E-21:34:2:1:1:42 MTB_anc 4119246 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv3679_Rv3679|gene3754|transcript|Transcript_gene3754|Coding|1/1|c.471C>T|p.Asp157Asp|471/1023|471/1023|157/340||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4119246C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4119246C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:53:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:61:31:30:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:49:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:52:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:66:30:36:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:52:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:52:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:68:29:39:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:41:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 4120916 . C CACGGTCGGCAACGATGCGGGCCGCGCAGCGGGCCGCTGAGGAACCGGCCCATCAGTG . PASS AC=34;AF=0.113;AN=300;ANN=CACGGTCGGCAACGATGCGGGCCGCGCAGCGGGCCGCTGAGGAACCGGCCCATCAGTG|stop_gained&disruptive_inframe_insertion|HIGH|Rv3680_Rv3680|gene3755|transcript|Transcript_gene3755|Coding|1/1|c.989_990insGGAACCGGCCCATCAGTGACGGTCGGCAACGATGCGGGCCGCGCAGCGGGCCGCTGA|p.Thr330_Ala331insGluProAlaHisGlnTerArgSerAlaThrMetArgAlaAlaGlnArgAlaAlaGlu|990/1161|990/1161|330/386||INFO_REALIGN_3_PRIME,CACGGTCGGCAACGATGCGGGCCGCGCAGCGGGCCGCTGAGGAACCGGCCCATCAGTG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4120916_4120917insACGGTCGGCAACGATGCGGGCCGCGCAGCGGGCCGCTGAGGAACCGGCCCATCAGTG||||||,CACGGTCGGCAACGATGCGGGCCGCGCAGCGGGCCGCTGAGGAACCGGCCCATCAGTG|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4120916_4120917insACGGTCGGCAACGATGCGGGCCGCGCAGCGGGCCGCTGAGGAACCGGCCCATCAGTG||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:38:48:27:21:49 0/0:0:0:0:0:15:0%:29:1E0:48:15:5:10:15 0/1:46:29:15:14:46:61.7%:99:2.4659E-12:41:17:10:7:47 0/0:60:1:1:0:16:6.25%:21:5E-1:45:15:10:5:16 0/0:60:1:0:1:17:5.88%:24:5E-1:44:16:12:4:18 0/1:46:9:6:3:12:75%:39:1.1057E-4:37:2:1:1:12 0/0:0:0:0:0:23:0%:44:1E0:48:23:16:7:23 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:19 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:23 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:17:0%:33:1E0:47:17:8:9:17 0/0:35:2:1:1:45:4.44%:64:2.4719E-1:42:43:27:16:46 0/0:0:0:0:0:13:0%:25:1E0:46:13:11:2:13 0/0:0:0:0:0:45:0%:85:1E0:43:45:28:17:45 0/0:0:0:0:0:23:0%:44:1E0:38:23:18:5:23 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:44:26:18:8:27 0/0:0:0:0:0:19:0%:37:1E0:46:19:13:6:19 0/1:44:10:7:3:13:76.92%:44:3.3652E-5:49:2:1:1:14 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:20:10:31 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:51 0/0:0:0:0:0:24:0%:44:1E0:42:24:14:10:24 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:32 0/1:44:29:17:12:40:72.5%:99:4.43E-13:38:11:6:5:41 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:20 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:37:1:1:0:21:4.76%:31:5E-1:43:20:15:5:21 0/0:60:1:0:1:43:2.33%:66:5E-1:43:41:27:14:44 0/0:60:1:1:0:36:2.78%:55:5E-1:44:35:20:15:36 0/0:0:0:0:0:38:0%:70:1E0:42:38:24:14:38 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:36 0/0:35:1:0:1:26:3.85%:38:5E-1:51:25:12:13:26 0/1:43:20:11:9:31:64.52%:80:9.197E-9:44:11:6:5:31 0/0:60:1:1:0:30:3.33%:44:5E-1:43:29:16:13:30 0/0:24:1:0:1:35:2.86%:55:5E-1:43:34:22:12:35 0/1:45:30:19:11:42:71.43%:99:9.555E-14:35:10:7:3:43 0/0:34:1:1:0:41:2.44%:66:5E-1:45:40:20:20:42 0/0:0:0:0:0:40:0%:74:1E0:47:40:25:15:41 0/0:0:0:0:0:45:0%:85:1E0:44:45:28:17:45 0/0:34:1:0:1:30:3.33%:44:5E-1:39:29:16:13:32 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:48 0/0:60:1:0:1:25:4%:38:5E-1:43:24:17:7:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:29 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:29 0/0:26:1:0:1:34:2.94%:51:5E-1:40:33:23:10:35 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:28:16:44 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:37 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:30 0/0:0:0:0:0:16:0%:29:1E0:48:16:10:6:16 0/0:0:0:0:0:45:0%:85:1E0:43:45:28:17:46 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:24 0/0:60:1:1:0:35:2.86%:55:5E-1:42:34:20:14:36 0/0:0:0:0:0:26:0%:47:1E0:38:26:13:13:28 0/0:0:0:0:0:41:0%:78:1E0:40:41:26:15:44 0/1:38:18:12:6:33:52.94%:68:1.5143E-7:38:15:7:8:34 0/1:43:12:6:6:17:66.67%:48:1.4831E-5:41:6:2:4:18 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:41 0/0:32:1:1:0:33:3.03%:52:5E-1:46:32:19:13:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:15:11:28 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:39 0/1:38:25:16:9:42:59.52%:99:1.1069E-10:38:15:8:7:42 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/1:46:32:23:9:49:64%:99:7.5916E-14:42:16:7:9:50 0/0:0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/1:42:27:18:9:43:62.79%:99:7.8264E-12:36:13:6:7:43 0/0:0:0:0:0:18:0%:32:1E0:44:18:12:6:19 0/0:0:0:0:0:14:0%:25:1E0:49:14:8:6:14 0/0:0:0:0:0:26:0%:47:1E0:44:26:19:7:27 0/1:48:15:9:6:22:68.18%:61:7.4178E-7:44:7:4:3:22 0/0:0:0:0:0:30:0%:55:1E0:49:30:18:12:30 0/0:35:1:0:1:27:3.7%:41:5E-1:51:26:13:13:27 0/0:0:0:0:0:39:0%:74:1E0:39:39:24:15:40 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:34:1:1:0:34:2.94%:52:5E-1:41:32:22:10:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:17:14:31 0/1:45:28:23:5:39:71.79%:99:9.4894E-13:40:10:3:7:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:43 0/0:32:1:0:1:32:3.12%:48:5E-1:44:31:15:16:33 0/0:0:0:0:0:17:0%:33:1E0:42:17:13:4:17 0/0:0:0:0:0:33:0%:63:1E0:42:33:22:11:35 0/0:37:1:0:1:34:2.94%:51:5E-1:41:33:22:11:34 0/1:40:18:12:6:27:62.07%:72:6.1806E-8:39:10:2:8:29 0/0:0:0:0:0:11:0%:22:1E0:51:11:7:4:11 0/0:0:0:0:0:30:0%:55:1E0:46:30:22:8:30 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:32 0/0:39:1:1:0:25:4%:38:5E-1:46:24:13:11:25 0/1:39:33:16:17:53:61.11%:99:5.4755E-14:39:19:12:7:55 0/0:0:0:0:0:25:0%:48:1E0:38:25:21:4:25 0/0:0:0:0:0:49:0%:93:1E0:41:49:28:21:50 0/1:36:14:9:5:21:63.64%:55:2.7817E-6:38:8:3:5:22 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:22 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/1:42:15:11:4:29:51.72%:58:1.4522E-6:44:10:7:3:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:17:9:26 0/1:38:22:12:10:26:78.57%:99:5.5261E-11:42:4:3:1:28 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:21:11:34 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:37 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/1:44:15:8:7:24:62.5%:59:1.196E-6:41:9:6:3:24 0/0:0:0:0:0:33:0%:63:1E0:45:33:19:14:34 0/1:44:28:20:8:34:77.78%:99:6.9527E-14:38:5:1:4:37 0/0:34:1:1:0:30:3.33%:44:5E-1:42:29:12:17:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:23:9:33 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:22 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:28 0/0:35:1:0:1:26:3.85%:38:5E-1:38:25:13:12:28 0/1:42:24:13:11:36:66.67%:99:1.1892E-10:41:11:8:3:40 0/0:0:0:0:0:30:0%:55:1E0:38:30:13:17:30 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:32:1:1:0:19:5.26%:28:5E-1:40:18:13:5:20 0/1:41:31:23:8:47:65.96%:99:2.2538E-13:36:16:8:8:47 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:41 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:13:9:22 0/0:0:0:0:0:42:0%:77:1E0:39:42:20:22:42 0/0:37:1:0:1:34:2.94%:51:5E-1:43:33:17:16:34 0/1:41:22:14:8:42:52.38%:82:5.4836E-9:40:20:11:9:42 0/0:35:1:0:1:34:2.94%:51:5E-1:38:33:19:14:34 0/0:0:0:0:0:39:0%:74:1E0:37:39:19:20:39 0/1:42:16:10:6:29:55.17%:61:7.3043E-7:37:12:5:7:30 0/1:40:29:20:9:42:65.91%:99:8.6436E-13:37:13:9:4:44 0/1:40:22:8:14:31:68.75%:90:8.0292E-10:37:10:5:5:33 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:41 0/1:43:17:8:9:30:56.67%:65:3.0928E-7:36:13:4:9:30 0/1:36:19:9:10:30:57.58%:73:4.7323E-8:39:14:12:2:33 0/0:37:1:0:1:17:5.88%:24:5E-1:38:16:6:10:19 0/0:0:0:0:0:26:0%:47:1E0:41:26:18:8:26 0/1:40:31:16:15:50:60.78%:99:2.2538E-13:36:16:9:7:52 0/1:46:21:13:8:34:61.76%:83:4.9442E-9:38:13:8:5:34 0/1:40:21:12:9:27:77.78%:92:5.6888E-10:35:6:6:0:27 0/0:0:0:0:0:32:0%:59:1E0:37:32:22:10:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:19 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:26:12:39 0/0:0:0:0:0:30:0%:55:1E0:38:30:22:8:30 0/1:40:10:7:3:16:62.5%:39:1.2413E-4:45:6:4:2:16 0/0:0:0:0:0:32:0%:59:1E0:40:32:24:8:34 0/1:42:25:17:8:34:71.43%:99:2.8437E-11:43:10:5:5:35 0/1:40:22:12:10:32:66.67%:92:5.875E-10:42:9:2:7:33 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:21 MTB_anc 4120926 . A G . PASS AC=128;AF=0.427;AN=300;ANN=G|missense_variant|MODERATE|Rv3680_Rv3680|gene3755|transcript|Transcript_gene3755|Coding|1/1|c.1132A>G|p.Asn378Asp|1132/1161|1132/1161|378/386||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4120926A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4120926A>G||||||;HOM=0;NC=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:38:19:10:9:73:26.03%:63:4.9649E-7:37:54:30:24:91 0/1:48:10:6:4:26:38.46%:34:3.3576E-4:48:16:6:10:27 0/1:40:17:8:9:65:26.15%:56:2.2923E-6:42:48:25:23:69 0/0:41:6:5:1:23:26.09%:11:1.0777E-2:43:17:11:6:28 0/1:41:7:6:1:24:29.17%:23:4.7006E-3:45:17:13:4:31 0/1:36:8:3:5:21:38.1%:27:1.7241E-3:44:13:8:5:24 0/1:44:10:5:5:37:27.03%:33:4.8486E-4:46:27:19:8:44 0/1:42:14:11:3:32:43.75%:50:9.8512E-6:38:18:11:7:40 0/1:44:9:6:3:34:26.47%:29:1.0644E-3:43:25:17:8:39 0/1:42:8:7:1:30:26.67%:26:2.2875E-3:42:22:11:11:35 0/0:34:6:4:2:24:25%:11:1.0968E-2:51:18:9:9:27 0/1:36:15:9:6:61:24.59%:49:1.1457E-5:38:46:30:16:73 0/0:48:2:1:1:17:11.76%:18:2.4242E-1:45:15:12:3:20 0/1:36:11:8:3:58:18.97%:35:2.8966E-4:44:47:29:18:65 0/1:36:12:7:5:33:36.36%:41:7.2075E-5:38:21:17:4:40 0/1:36:14:10:4:38:36.84%:48:1.407E-5:45:24:13:11:44 0/1:34:9:5:4:32:28.12%:29:1.0185E-3:45:23:14:9:40 0/1:36:11:8:3:29:37.93%:38:1.5195E-4:44:18:12:6:30 0/0:37:2:0:2:19:10.53%:21:2.4324E-1:39:17:11:6:21 0/1:35:9:4:5:40:22.5%:29:1.1791E-3:47:31:15:16:44 0/1:40:13:9:4:51:25.49%:42:5.092E-5:42:38:25:13:57 0/1:39:13:8:5:71:18.31%:41:6.6777E-5:40:58:33:25:84 0/0:35:6:5:1:26:23.08%:13:1.1309E-2:45:20:13:7:32 0/1:36:11:6:5:40:27.5%:36:2.2064E-4:45:29:14:15:51 0/1:42:17:8:9:58:29.31%:57:1.9326E-6:41:41:23:18:70 0/1:38:11:6:5:32:34.38%:37:1.7351E-4:44:21:10:11:37 0/1:40:10:5:5:33:30.3%:33:4.3872E-4:42:23:12:11:38 0/1:39:10:7:3:33:30.3%:33:4.3872E-4:45:23:18:5:35 0/1:36:15:9:6:58:25.86%:49:1.0808E-5:42:43:27:16:64 0/1:42:9:5:4:45:20%:29:1.2547E-3:41:36:20:16:51 0/1:38:16:11:5:60:26.67%:53:4.8192E-6:41:44:28:16:68 0/1:39:16:11:5:52:30.77%:54:3.905E-6:40:36:23:13:59 0/0:50:4:1:3:30:13.33%:26:5.62E-2:51:26:13:13:36 0/1:35:10:6:4:48:20.83%:32:5.7985E-4:39:38:22:16:52 0/1:45:13:8:5:43:30.23%:43:4.2025E-5:40:30:17:13:48 0/1:39:20:12:8:60:33.33%:68:1.4228E-7:40:40:27:13:69 0/1:39:13:9:4:62:20.97%:42:6.0557E-5:39:49:30:19:68 0/1:40:23:11:12:71:32.39%:78:1.4169E-8:43:48:24:24:83 0/1:41:13:8:5:58:22.41%:42:5.7349E-5:45:45:30:15:68 0/1:45:16:13:3:61:26.23%:53:4.9254E-6:44:45:27:18:73 0/1:39:9:6:3:43:20.93%:29:1.2112E-3:39:33:16:17:46 0/0:35:2:0:2:51:3.92%:70:2.4747E-1:41:48:26:22:51 0/1:37:16:6:10:37:43.24%:57:1.9143E-6:47:21:15:6:44 0/1:42:14:9:5:45:31.11%:47:1.8462E-5:40:31:20:11:53 0/1:44:11:7:4:40:27.5%:36:2.2064E-4:42:29:19:10:46 0/1:44:9:5:4:48:18.75%:28:1.2935E-3:39:39:31:8:53 0/1:37:17:8:9:52:32.69%:57:1.5975E-6:43:35:21:14:60 0/0:37:1:0:1:43:2.33%:70:5E-1:41:42:26:16:44 0/1:38:15:7:8:51:29.41%:50:9.1412E-6:39:36:19:17:60 0/1:41:14:7:7:48:29.17%:46:2.0156E-5:45:34:23:11:52 0/1:38:7:4:3:22:31.82%:23:4.4505E-3:46:15:11:4:24 0/1:36:13:10:3:63:20.63%:42:6.1313E-5:43:50:30:20:67 0/1:36:10:2:8:34:29.41%:33:4.51E-4:42:24:15:9:37 0/1:40:15:10:5:48:31.25%:50:8.3573E-6:40:33:17:16:55 0/0:36:1:0:1:27:3.7%:38:5E-1:44:25:12:13:32 0/1:37:18:11:7:64:28.12%:60:9.4974E-7:41:46:28:18:73 0/1:39:17:8:9:56:30.36%:57:1.8236E-6:39:39:24:15:62 0/1:39:8:6:2:27:29.63%:26:2.1337E-3:40:19:8:11:29 0/1:35:14:10:4:55:25.45%:46:2.3698E-5:44:41:23:18:66 0/1:39:16:8:8:45:35.56%:55:3.0122E-6:45:29:17:12:51 0/1:38:8:4:4:38:21.05%:25:2.5935E-3:40:30:16:14:41 0/1:38:13:7:6:55:23.64%:42:5.473E-5:41:42:19:23:64 0/1:38:18:8:10:60:30%:60:8.5119E-7:38:42:23:19:73 0/1:38:9:4:5:29:31.03%:30:9.4048E-4:48:20:13:7:36 0/1:40:9:7:2:38:23.68%:29:1.1442E-3:42:29:14:15:43 0/1:42:21:10:11:74:28.38%:70:9.1193E-8:43:53:32:21:84 0/1:45:12:6:6:35:34.29%:41:7.8434E-5:42:23:14:9:41 0/1:36:18:8:10:61:29.51%:60:8.7622E-7:40:43:28:15:72 0/1:44:8:6:2:29:27.59%:26:2.2392E-3:44:21:13:8:36 0/1:39:13:8:5:27:48.15%:47:1.6379E-5:49:13:8:5:30 0/1:46:18:10:8:46:39.13%:63:4.7997E-7:45:28:20:8:56 0/1:42:13:5:8:36:36.11%:44:3.2589E-5:46:23:14:9:41 0/0:52:3:1:2:32:9.38%:34:1.1905E-1:50:29:17:12:34 0/1:39:12:3:9:40:30%:40:9.2733E-5:51:28:15:13:43 0/1:43:12:9:3:54:22.22%:39:1.23E-4:38:42:25:17:60 0/1:37:9:2:7:39:23.08%:29:1.162E-3:46:30:15:15:43 0/1:36:19:12:7:49:38.78%:66:2.1763E-7:42:30:20:10:55 0/1:41:10:8:2:44:22.73%:32:5.4972E-4:44:34:18:16:50 0/1:40:16:7:9:50:32%:54:3.6584E-6:41:34:18:16:60 0/1:35:14:7:7:52:26.92%:46:2.2247E-5:38:38:26:12:65 0/1:37:9:7:2:41:21.95%:29:1.1955E-3:48:32:19:13:46 0/1:35:18:12:6:64:28.12%:60:9.4974E-7:40:46:26:20:74 0/1:41:12:6:6:48:25%:39:1.1153E-4:45:36:17:19:57 0/1:39:10:7:3:26:38.46%:34:3.3576E-4:41:16:13:3:30 0/1:36:11:4:7:47:23.4%:35:2.5227E-4:39:36:24:12:54 0/1:38:9:4:5:46:20%:29:1.2547E-3:39:36:23:13:53 0/1:37:14:8:6:43:32.56%:47:1.727E-5:39:29:13:16:50 0/1:37:7:7:0:20:35%:23:4.158E-3:49:13:8:5:21 0/1:40:13:8:5:44:29.55%:43:4.324E-5:45:31:23:8:51 0/1:35:10:4:6:30:33.33%:33:3.9851E-4:47:20:13:7:30 0/1:36:12:7:5:44:27.27%:39:1.027E-4:42:32:21:11:52 0/0:40:5:1:4:27:18.52%:19:2.5527E-2:50:22:12:10:28 0/1:36:19:10:9:67:28.36%:63:4.3121E-7:39:48:23:25:78 0/1:35:11:9:2:36:30.56%:37:1.9879E-4:40:25:21:4:44 0/1:38:14:6:8:69:20.29%:45:2.9344E-5:40:55:31:24:76 0/0:38:4:4:0:26:15.38%:20:5.5222E-2:39:22:11:11:29 0/1:36:7:7:0:30:23.33%:22:5.2713E-3:43:23:11:12:31 0/0:38:1:0:1:29:3.45%:45:5E-1:42:28:16:12:30 0/1:36:11:7:4:40:27.5%:36:2.2064E-4:40:29:19:10:50 0/1:36:13:7:6:44:29.55%:43:4.324E-5:38:31:21:10:51 0/1:37:11:7:4:43:25.58%:36:2.3512E-4:39:32:22:10:47 0/1:40:8:8:0:42:19.05%:25:2.7074E-3:41:34:21:13:51 0/1:35:14:10:4:46:30.43%:47:1.9039E-5:44:32:20:12:51 0/1:35:11:6:5:45:24.44%:36:2.4398E-4:41:34:21:13:48 0/0:36:4:2:2:24:16.67%:18:5.461E-2:42:20:9:11:25 0/1:40:20:12:8:46:43.48%:72:6.2178E-8:45:25:15:10:48 0/1:40:10:7:3:49:20.41%:32:5.8675E-4:45:39:21:18:56 0/1:37:11:8:3:51:21.57%:35:2.6733E-4:38:40:27:13:59 0/1:40:10:7:3:42:23.81%:32:5.3293E-4:40:32:13:19:50 0/0:0:0:0:0:34:0%:62:1E0:41:34:25:9:35 0/1:38:17:7:10:50:34%:58:1.4808E-6:42:33:19:14:51 0/1:41:7:4:3:33:21.21%:22:5.4855E-3:39:26:17:9:35 0/0:38:3:3:0:29:10.34%:31:1.1842E-1:39:26:13:13:31 0/1:44:8:4:4:37:21.62%:25:2.5617E-3:41:29:12:17:42 0/1:34:14:9:5:41:34.15%:47:1.6028E-5:36:27:15:12:41 0/1:37:15:9:6:61:24.59%:49:1.1029E-5:38:44:24:20:67 0/1:37:15:12:3:48:31.25%:50:8.3573E-6:37:33:14:19:55 0/0:37:1:0:1:27:3.7%:41:5E-1:41:26:13:13:27 0/0:37:6:3:3:23:26.09%:9:1.057E-2:47:16:12:4:26 0/1:38:20:9:11:64:31.25%:67:1.6397E-7:38:44:27:17:79 0/1:38:14:9:5:57:24.14%:46:2.416E-5:42:42:19:23:63 0/1:43:8:5:3:33:24.24%:26:2.4173E-3:40:25:13:12:38 0/0:37:4:3:1:26:15.38%:20:5.5222E-2:46:22:13:9:30 0/0:36:4:3:1:47:8.33%:53:5.849E-2:36:43:21:22:54 0/1:33:9:3:6:39:23.08%:29:1.162E-3:43:30:16:14:47 0/1:37:15:9:6:54:27.78%:50:9.8829E-6:40:39:21:18:64 0/1:35:17:6:11:46:36.96%:59:1.2413E-6:37:29:15:14:49 0/1:36:8:5:3:48:16.67%:25:2.8457E-3:37:40:17:23:55 0/1:34:11:7:4:40:27.5%:36:2.2064E-4:36:29:15:14:47 0/1:35:13:8:5:56:23.21%:42:5.5625E-5:37:43:27:16:66 0/1:34:10:6:4:45:22.22%:32:5.4972E-4:38:34:12:22:50 0/1:37:8:8:0:50:16%:25:2.8851E-3:39:42:19:23:51 0/1:37:11:8:3:41:26.83%:36:2.2064E-4:37:29:11:18:45 0/1:36:10:8:2:48:20.83%:32:5.7985E-4:38:38:25:13:56 0/1:35:10:7:3:29:34.48%:34:3.8387E-4:36:19:8:11:33 0/1:38:11:6:5:40:27.5%:36:2.2064E-4:39:29:20:9:42 0/1:33:9:6:3:68:13.24%:28:1.4724E-3:37:59:27:32:76 0/1:35:12:4:8:49:24.49%:39:1.1358E-4:40:37:21:16:53 0/1:41:7:4:3:38:18.42%:22:5.7727E-3:40:31:19:12:46 0/1:35:17:10:7:52:32.69%:58:1.5394E-6:36:34:22:12:57 0/0:37:1:0:1:34:2.94%:51:5E-1:42:33:20:13:36 0/1:40:7:4:3:30:23.33%:22:5.2713E-3:41:23:12:11:32 0/1:40:9:7:2:37:24.32%:29:1.1256E-3:41:28:14:14:43 0/1:37:10:7:3:52:19.23%:32:5.9987E-4:41:41:29:12:61 0/0:36:6:2:4:38:15.79%:28:1.2628E-2:36:32:24:8:43 0/1:36:9:8:1:27:33.33%:30:8.8132E-4:39:18:12:6:31 0/1:37:9:6:3:41:21.95%:29:1.1955E-3:37:32:21:11:50 0/1:38:15:8:7:51:29.41%:50:9.1412E-6:40:36:22:14:61 0/1:41:10:7:3:51:19.61%:32:5.9987E-4:42:41:17:24:59 0/1:37:11:8:3:33:33.33%:37:1.8019E-4:44:22:9:13:35 MTB_anc 4120983 . G A . PASS AC=115;AF=0.383;AN=300;ANN=A|intergenic_region|MODIFIER|Rv3680_Rv3680-whiB4_Rv3681c|gene3755-gene3756|intergenic_region|gene3755-gene3756|||n.4120983G>A||||||;HOM=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:36:30:18:12:68:44.12%:99:1.4855E-11:42:38:17:21:84 0/1:46:10:5:5:28:35.71%:34:3.6855E-4:52:18:12:6:32 0/0:0:0:0:0:55:0%:99:1E0:45:55:30:25:62 0/1:44:12:7:5:36:33.33%:40:8.1472E-5:47:24:16:8:41 0/1:40:13:8:5:37:35.14%:44:3.404E-5:41:24:12:12:44 0/0:38:1:0:1:32:3.12%:48:5E-1:48:31:14:17:36 0/1:45:20:12:8:49:40.82%:70:8.2643E-8:43:29:17:12:58 0/1:33:10:5:5:38:26.32%:33:4.9525E-4:42:28:15:13:46 0/1:44:14:8:6:39:35.9%:48:1.4735E-5:45:25:15:10:45 0/1:46:10:4:6:32:31.25%:33:4.259E-4:45:22:12:10:39 0/1:47:11:5:6:31:35.48%:37:1.6659E-4:50:20:10:10:35 0/1:38:24:14:10:58:41.38%:85:2.9186E-9:44:34:19:15:75 0/1:46:8:7:1:18:44.44%:28:1.4461E-3:48:10:4:6:20 0/1:42:25:15:10:67:37.31%:87:1.8806E-9:40:42:19:23:81 0/1:38:13:11:2:38:34.21%:44:3.5456E-5:40:25:8:17:46 0/1:42:14:6:8:50:28%:46:2.1224E-5:44:36:19:17:56 0/1:37:13:7:6:30:43.33%:46:2.3178E-5:39:17:8:9:33 0/1:43:9:6:3:32:28.12%:29:1.0185E-3:37:23:10:13:34 0/0:38:1:1:0:20:5%:27:5E-1:40:19:6:13:22 0/1:49:22:9:13:45:48.89%:81:7.724E-9:45:23:8:15:52 0/1:41:21:12:9:56:37.5%:73:4.7115E-8:43:35:19:16:62 0/1:38:32:20:12:71:45.07%:99:2.4568E-12:42:39:17:22:88 0/1:38:11:5:6:25:44%:39:1.1933E-4:38:14:7:7:32 0/1:44:20:7:13:49:40.82%:70:8.2643E-8:41:29:15:14:58 0/0:36:3:1:2:59:5.08%:79:1.2179E-1:44:56:29:27:69 0/1:41:13:6:7:39:33.33%:44:3.6837E-5:42:26:11:15:42 0/1:42:17:10:7:37:45.95%:61:6.9312E-7:44:20:11:9:43 0/1:46:8:5:3:31:25.81%:26:2.3332E-3:40:23:13:10:35 0/1:45:27:19:8:59:45.76%:98:1.5211E-10:43:32:16:16:72 0/1:42:27:12:15:54:50%:99:9.2779E-11:40:27:11:16:60 0/1:42:17:9:8:56:30.36%:57:1.8236E-6:41:39:19:20:70 0/1:36:22:13:9:57:38.6%:77:1.9179E-8:41:35:16:19:69 0/1:45:19:9:10:41:46.34%:69:1.2413E-7:48:22:11:11:48 0/0:33:2:1:1:43:4.65%:60:2.4706E-1:41:41:21:20:47 0/1:41:21:10:11:52:40.38%:74:3.7578E-8:43:31:15:16:61 0/1:39:23:12:11:57:40.35%:81:7.2965E-9:45:34:16:18:70 0/0:36:2:1:1:57:3.51%:84:2.4779E-1:45:55:31:24:68 0/1:47:27:12:15:78:34.62%:93:4.8611E-10:44:51:22:29:93 0/1:45:27:14:13:71:38.03%:94:3.4721E-10:41:44:22:22:84 0/1:40:31:18:13:65:47.69%:99:4.0316E-12:42:34:20:14:77 0/1:40:19:9:10:46:42.22%:67:1.6979E-7:42:26:16:10:51 0/1:42:25:12:13:55:45.45%:90:8.49E-10:39:30:16:14:63 0/1:41:15:9:6:41:36.59%:51:6.364E-6:42:26:10:16:45 0/1:40:17:12:5:42:40.48%:60:9.9678E-7:42:25:13:12:52 0/1:41:20:11:9:51:39.22%:70:9.3266E-8:42:31:13:18:54 0/1:39:22:16:6:54:40.74%:77:1.6045E-8:42:32:18:14:61 0/1:42:18:10:8:55:32.73%:61:7.2242E-7:40:37:17:20:65 0/1:39:23:16:7:65:35.38%:79:1.1134E-8:41:42:15:27:75 0/1:46:18:8:10:63:28.57%:60:9.255E-7:39:45:20:25:73 0/1:51:17:11:6:48:35.42%:58:1.3619E-6:44:31:16:15:57 0/1:50:8:6:2:22:36.36%:27:1.8042E-3:45:14:6:8:24 0/1:39:36:19:17:66:54.55%:99:1.8199E-14:40:30:18:12:76 0/1:40:14:9:5:35:40%:49:1.2005E-5:42:21:6:15:41 0/1:38:18:9:9:48:37.5%:62:5.3443E-7:42:30:16:14:55 0/1:44:13:7:6:39:33.33%:44:3.6837E-5:38:26:9:17:47 0/1:39:22:13:9:70:31.43%:74:3.3578E-8:40:48:22:26:81 0/0:37:1:0:1:50:2%:80:5E-1:46:49:25:24:56 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/1:42:22:11:11:58:37.93%:76:2.025E-8:41:36:21:15:72 0/1:48:17:9:8:53:32.08%:57:1.655E-6:42:36:19:17:62 0/1:42:14:8:6:36:38.89%:48:1.2704E-5:40:22:9:13:40 0/1:37:21:8:13:58:36.21%:72:5.1992E-8:44:37:16:21:66 0/0:35:2:2:0:58:3.45%:84:2.4783E-1:41:56:26:30:65 0/1:44:15:8:7:37:40.54%:52:5.1339E-6:43:22:12:10:44 0/1:39:12:5:7:32:37.5%:41:6.8751E-5:44:20:11:9:44 0/0:0:0:0:0:73:0%:99:1E0:45:73:35:38:85 0/1:41:18:8:10:43:41.86%:64:3.7193E-7:47:24:13:11:51 0/0:35:3:1:2:64:4.69%:86:1.2205E-1:43:61:35:26:72 0/1:43:17:10:7:36:47.22%:61:6.3405E-7:50:19:14:5:44 0/1:46:9:4:5:30:30%:30:9.678E-4:46:21:12:9:33 0/1:48:15:10:5:50:30%:50:8.8847E-6:46:35:17:18:61 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:35 0/1:44:22:12:10:33:66.67%:89:1.0623E-9:42:11:5:6:35 0/1:49:17:8:9:47:36.17%:58:1.3018E-6:48:30:13:17:52 0/1:38:28:15:13:62:45.16%:99:7.0184E-11:42:34:20:14:69 0/1:45:19:7:12:43:44.19%:68:1.4658E-7:39:24:8:16:49 0/1:46:17:11:6:49:34.69%:58:1.4216E-6:40:32:18:14:54 0/1:47:16:5:11:40:40%:56:2.1927E-6:46:23:14:9:49 0/1:43:15:5:10:58:25.86%:49:1.0808E-5:39:43:14:29:71 0/0:37:3:1:2:47:6.38%:59:1.2097E-1:49:44:30:14:60 0/1:44:18:5:13:47:38.3%:62:5.072E-7:38:29:9:20:54 0/1:40:29:15:14:72:40.28%:99:5.3416E-11:41:43:27:16:84 0/1:43:22:8:14:54:40.74%:77:1.6045E-8:44:32:12:20:64 0/0:39:6:5:1:28:21.43%:16:1.1603E-2:45:22:12:10:35 0/1:38:16:8:8:48:33.33%:54:3.4048E-6:37:32:13:19:58 0/1:34:18:12:6:43:41.86%:63:3.9871E-7:39:25:12:13:51 0/0:34:2:1:1:41:4.88%:57:2.4691E-1:44:39:17:22:47 0/1:42:11:7:4:25:44%:39:1.1933E-4:39:14:10:4:25 0/1:44:22:15:7:51:43.14%:78:1.3059E-8:41:29:13:16:58 0/1:49:14:9:5:34:41.18%:49:1.1295E-5:44:20:9:11:35 0/1:40:24:15:9:53:45.28%:86:2.005E-9:44:29:12:17:66 0/1:45:15:9:6:32:46.88%:54:3.5464E-6:43:17:6:11:35 0/0:35:2:2:0:64:3.12%:94:2.4803E-1:44:62:34:28:71 0/1:40:15:11:4:37:40.54%:52:5.1339E-6:41:22:13:9:51 0/1:38:35:17:18:79:44.3%:99:2.2057E-13:42:44:23:21:88 0/0:31:2:1:1:29:6.9%:37:2.4561E-1:40:27:14:13:33 0/1:39:19:9:10:42:45.24%:68:1.3525E-7:39:23:12:11:46 0/1:43:14:7:7:46:30.43%:47:1.8462E-5:42:31:15:16:51 0/0:36:1:0:1:41:2.44%:66:5E-1:45:40:28:12:47 0/1:40:12:8:4:45:26.67%:39:1.05E-4:37:33:14:19:53 0/0:0:0:0:0:38:0%:70:1E0:47:38:24:14:48 0/1:41:14:7:7:45:31.11%:47:1.8462E-5:42:31:18:13:58 0/1:40:23:12:11:51:45.1%:83:4.7339E-9:38:28:15:13:58 0/1:38:23:13:10:51:45.1%:83:4.7339E-9:37:28:15:13:56 0/1:48:9:4:5:31:29.03%:30:9.9376E-4:35:22:11:11:33 0/0:0:0:0:0:34:0%:63:1E0:45:33:21:12:40 0/1:38:20:11:9:46:43.48%:71:6.7171E-8:41:26:14:12:53 0/0:38:4:2:2:54:7.41%:62:5.8946E-2:44:49:32:17:59 0/1:40:21:8:13:53:39.62%:73:3.9927E-8:39:32:17:15:62 0/1:38:19:13:6:55:34.55%:65:2.9054E-7:42:36:18:18:68 0/1:40:23:13:10:50:46%:83:4.3451E-9:41:27:13:14:53 0/1:41:17:10:7:40:42.5%:60:8.743E-7:44:23:13:10:46 0/1:37:16:7:9:27:59.26%:62:6.1806E-7:37:11:8:3:30 0/1:40:19:7:12:38:50%:70:9.2415E-8:43:19:8:11:45 0/1:42:10:4:6:36:27.78%:33:4.7404E-4:40:26:14:12:40 0/0:37:1:1:0:60:1.72%:94:5E-1:42:57:32:25:68 0/1:38:19:6:13:59:32.2%:64:3.3862E-7:38:40:23:17:65 0/1:43:11:4:7:34:32.35%:37:1.8662E-4:43:23:11:12:44 0/1:36:11:7:4:35:32.35%:37:1.8662E-4:37:23:12:11:40 0/0:35:2:1:1:60:3.33%:88:2.479E-1:44:58:27:31:70 0/1:41:32:10:22:72:45.71%:99:2.2536E-12:40:38:21:17:82 0/1:37:17:8:9:40:42.5%:60:8.743E-7:44:23:15:8:48 0/1:43:18:10:8:34:52.94%:67:1.7305E-7:38:16:8:8:40 0/1:36:24:10:14:57:42.86%:85:2.5383E-9:36:32:20:12:67 0/1:39:20:9:11:55:36.36%:69:1.1494E-7:37:35:18:17:62 0/0:37:4:0:4:51:7.84%:59:5.8806E-2:42:47:29:18:62 0/1:35:18:8:10:49:36.73%:62:5.6162E-7:35:31:12:19:54 0/1:36:26:9:17:55:47.27%:95:2.9965E-10:37:29:14:15:60 0/0:35:3:1:2:40:7.5%:46:1.2025E-1:40:37:18:19:46 0/0:37:2:1:1:51:3.92%:74:2.4752E-1:41:49:29:20:61 0/0:34:1:0:1:46:2.17%:73:5E-1:39:45:23:22:52 0/1:40:29:13:16:57:50.88%:99:1.4722E-11:36:28:19:9:63 0/0:30:1:0:1:42:2.44%:66:5E-1:39:40:22:18:44 0/0:32:2:2:0:43:4.65%:60:2.4706E-1:43:41:30:11:51 0/1:34:10:4:6:34:29.41%:33:4.51E-4:40:24:11:13:40 0/1:37:20:17:3:45:44.44%:72:6.2178E-8:38:25:16:9:49 0/0:44:3:0:3:58:5.17%:75:1.2174E-1:41:55:32:23:66 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:48 0/0:36:1:1:0:42:2.38%:66:5E-1:41:41:21:20:46 0/1:36:17:13:4:57:30.36%:57:1.8236E-6:41:39:23:16:65 0/1:41:20:13:7:41:48.78%:73:4.3347E-8:40:21:8:13:46 0/1:42:14:5:9:38:36.84%:48:1.407E-5:40:24:13:11:42 0/1:39:19:9:10:42:45.24%:68:1.3525E-7:44:23:12:11:47 0/1:40:24:14:10:57:42.11%:85:2.7262E-9:41:33:16:17:68 0/1:33:18:11:7:40:45%:64:3.1919E-7:39:22:11:11:49 0/0:60:1:1:0:27:3.7%:41:5E-1:45:26:19:7:32 0/1:38:24:13:11:46:52.17%:90:9.761E-10:39:22:12:10:57 0/0:37:2:0:2:54:3.7%:77:2.4766E-1:44:52:32:20:64 0/0:37:1:0:1:44:2.27%:69:5E-1:45:43:21:22:52 0/1:42:12:3:9:41:29.27%:40:9.5339E-5:40:29:16:13:44 MTB_anc 4121478 . TC T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|frameshift_variant|HIGH|whiB4_Rv3681c|gene3756|transcript|Transcript_gene3756|Coding|1/1|c.76delG|p.Glu26fs|76/357|76/357|26/118||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4121479delC||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.4121479delC||||||;HET=0;LOF=(whiB4_Rv3681c|gene3756|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:44:54:29:25:54 0/0:0:0:0:0:21:0%:40:1E0:50:21:12:9:22 0/0:0:0:0:0:57:0%:99:1E0:43:57:30:27:57 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:12:21:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:29 0/0:0:0:0:0:51:0%:97:1E0:49:51:24:27:51 0/0:0:0:0:0:34:0%:62:1E0:49:34:19:15:35 0/0:0:0:0:0:40:0%:74:1E0:53:40:16:24:40 0/0:0:0:0:0:39:0%:74:1E0:48:39:21:18:39 0/0:0:0:0:0:56:0%:99:1E0:49:56:28:28:56 0/0:0:0:0:0:42:0%:77:1E0:46:42:23:19:42 0/0:0:0:0:0:14:0%:25:1E0:47:14:7:7:14 0/0:0:0:0:0:57:0%:99:1E0:45:57:30:27:57 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:17:14:32 0/0:0:0:0:0:30:0%:55:1E0:46:30:9:21:31 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:34 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:43 0/0:0:0:0:0:59:0%:99:1E0:43:59:30:29:60 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:15:17:33 0/0:0:0:0:0:15:0%:29:1E0:54:15:8:7:15 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:0:0:0:0:35:0%:67:1E0:49:35:23:12:36 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:40:0%:74:1E0:48:40:23:17:40 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:39:0%:74:1E0:48:39:22:17:40 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:51 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:60:0%:99:1E0:49:60:35:25:61 0/0:0:0:0:0:47:0%:89:1E0:50:47:25:22:48 0/0:0:0:0:0:62:0%:99:1E0:45:62:29:33:62 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:32 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:13:0%:25:1E0:40:13:9:4:13 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:10:18:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:20:11:32 0/0:0:0:0:0:55:0%:99:1E0:42:55:34:21:55 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:23:0%:44:1E0:54:23:16:7:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:0:0:0:0:50:0%:92:1E0:47:50:25:25:50 0/0:0:0:0:0:23:0%:44:1E0:48:23:9:14:24 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:46:0%:85:1E0:46:46:23:23:46 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:28 0/0:0:0:0:0:43:0%:82:1E0:43:43:25:18:44 0/0:0:0:0:0:53:0%:99:1E0:49:53:27:26:53 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:31 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:41 0/0:0:0:0:0:47:0%:89:1E0:47:47:20:27:47 0/0:0:0:0:0:39:0%:74:1E0:49:39:21:18:40 0/0:0:0:0:0:50:0%:92:1E0:46:50:30:20:50 0/0:0:0:0:0:44:0%:81:1E0:49:44:23:21:45 0/0:0:0:0:0:24:0%:44:1E0:48:24:9:15:24 0/0:0:0:0:0:34:0%:62:1E0:44:34:24:10:34 0/0:0:0:0:0:20:0%:36:1E0:53:20:10:10:21 0/0:0:0:0:0:33:0%:63:1E0:49:33:18:15:33 0/0:0:0:0:0:43:0%:82:1E0:46:43:25:18:45 0/0:0:0:0:0:36:0%:66:1E0:50:36:19:17:36 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:29 0/0:0:0:0:0:45:0%:85:1E0:49:45:22:23:45 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:25 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:29 0/0:0:0:0:0:46:0%:85:1E0:49:46:24:22:46 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:30:0%:55:1E0:51:30:19:11:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:31 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:34 0/0:0:0:0:0:24:0%:44:1E0:48:24:7:17:24 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:37 0/0:0:0:0:0:38:0%:70:1E0:49:38:20:18:39 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:24 0/0:0:0:0:0:60:0%:99:1E0:41:60:34:26:61 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:55:0%:99:1E0:45:55:27:28:55 0/0:0:0:0:0:24:0%:44:1E0:42:24:9:15:25 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:34 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:39 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:28:0%:51:1E0:47:28:9:19:30 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:48:0%:89:1E0:41:48:26:22:49 0/0:0:0:0:0:32:0%:59:1E0:44:32:22:10:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:17:7:24 0/0:0:0:0:0:38:0%:70:1E0:49:38:19:19:38 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:42:0%:77:1E0:47:42:26:16:42 0/0:0:0:0:0:39:0%:74:1E0:48:39:16:23:40 0/0:0:0:0:0:34:0%:62:1E0:48:34:17:17:35 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:43 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:42 0/0:0:0:0:0:33:0%:63:1E0:39:33:12:21:34 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:43:0%:82:1E0:43:43:18:25:44 0/0:0:0:0:0:64:0%:99:1E0:40:64:34:30:69 0/0:0:0:0:0:45:0%:85:1E0:41:45:28:17:47 0/0:0:0:0:0:45:0%:85:1E0:51:45:21:24:46 0/0:0:0:0:0:39:0%:74:1E0:44:39:15:24:40 0/0:0:0:0:0:80:0%:99:1E0:42:80:36:44:81 0/0:0:0:0:0:57:0%:99:1E0:43:57:24:33:57 0/0:0:0:0:0:32:0%:59:1E0:40:32:19:13:32 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:47:0%:89:1E0:41:47:22:25:50 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:53:0%:99:1E0:41:53:29:24:56 0/0:0:0:0:0:40:0%:74:1E0:39:40:15:25:43 0/0:0:0:0:0:53:0%:99:1E0:44:53:33:20:55 0/0:0:0:0:0:39:0%:74:1E0:43:39:15:24:40 0/0:0:0:0:0:51:0%:97:1E0:41:51:29:22:52 0/0:0:0:0:0:59:0%:99:1E0:43:59:28:31:59 0/0:0:0:0:0:56:0%:99:1E0:42:56:25:31:56 0/0:0:0:0:0:46:0%:85:1E0:43:46:26:20:46 0/0:0:0:0:0:43:0%:82:1E0:40:43:28:15:49 0/0:0:0:0:0:41:0%:78:1E0:42:41:27:14:41 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/0:0:0:0:0:55:0%:99:1E0:40:55:27:28:57 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:38 0/0:0:0:0:0:44:0%:81:1E0:40:44:26:18:44 0/0:0:0:0:0:52:0%:96:1E0:44:52:31:21:53 0/0:0:0:0:0:31:0%:59:1E0:43:31:16:15:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:18:18:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:14:25:41 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:42 0/0:0:0:0:0:20:0%:36:1E0:46:20:8:12:21 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:39 0/0:0:0:0:0:50:0%:92:1E0:45:50:23:27:50 0/0:0:0:0:0:57:0%:99:1E0:42:57:28:29:60 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:48 MTB_anc 4121675 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|whiB4_Rv3681c-ponA2_Rv3682|gene3756-gene3757|intergenic_region|gene3756-gene3757|||n.4121675T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:41:19:22:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:45:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:48:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:16:13:3:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:22:12:10:23:95.65%:99:4.7526E-13:0:0:0:0:24 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:62:35:27:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:44:54:37:17:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:24:20:4:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:24:14:10:25:96%:99:2.0568E-13:37:1:0:1:25 1/1:49:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:28:16:12:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:45:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:39:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:66:30:36:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:59:37:22:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:57:35:22:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:60:36:24:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:62:34:28:63:98.41%:99:6.5755E-37:0:0:0:0:63 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 4121727 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|whiB4_Rv3681c-ponA2_Rv3682|gene3756-gene3757|intergenic_region|gene3756-gene3757|||n.4121727A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:21:5:16:22:95.45%:99:1.0931E-11:33:1:1:0:22 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:67:38:29:67:100%:99:6.6743E-40:0:0:0:0:69 1/1:45:41:31:10:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:16:15:32:96.88%:99:1.8007E-17:60:1:0:1:32 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:46:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:26:14:12:27:96.3%:99:1.4382E-14:38:1:0:1:30 1/1:39:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:24:19:5:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:36:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:36:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:23:16:7:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:36:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:38:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:40 1/1:37:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:60:38:22:60:100%:99:1.035E-35:0:0:0:0:60 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:29:14:15:30:96.67%:99:2.6212E-16:29:1:1:0:31 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:40:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 4130711 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv3689_Rv3689|gene3765|transcript|Transcript_gene3765|Coding|1/1|c.355C>G|p.Leu119Val|355/1356|355/1356|119/451||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4130711C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4130711C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:50:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:44:61:25:36:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:22:10:12:23:95.65%:99:4.7526E-13:0:0:0:0:27 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:61:23:38:61:100%:99:2.609E-36:0:0:0:0:65 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:42:28:14:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:65:24:41:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:55:18:37:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:43:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:43:14:29:44:97.73%:99:1.5066E-25:0:0:0:0:46 1/1:42:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:34:6:28:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:50:15:35:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:38:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:65:27:38:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:32:11:21:33:96.97%:99:4.7095E-18:25:1:1:0:33 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 MTB_anc 4132034 . C A . PASS AC=4;AF=0.013;AN=300;ANN=A|missense_variant|MODERATE|Rv3690_Rv3690|gene3766|transcript|Transcript_gene3766|Coding|1/1|c.296C>A|p.Ala99Asp|296/654|296/654|99/217||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4132034C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4132034C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:42:53:25:28:54 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:22 0/0:0:0:0:0:52:0%:96:1E0:46:52:22:30:52 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:25:0%:48:1E0:44:25:16:9:25 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:34 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:24:0%:44:1E0:47:24:9:15:24 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:35 0/0:0:0:0:0:29:0%:55:1E0:46:29:19:10:30 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:41 0/0:0:0:0:0:16:0%:29:1E0:45:16:6:10:16 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:18 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:42:26:18:8:26 0/0:0:0:0:0:59:0%:99:1E0:42:59:31:28:62 0/0:60:1:1:0:32:3.12%:48:5E-1:44:31:15:16:32 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:12:0%:21:1E0:38:12:6:6:12 0/0:0:0:0:0:17:0%:33:1E0:44:17:10:7:17 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:30 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:18:14:32 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:46 0/0:0:0:0:0:57:0%:99:1E0:47:57:31:26:59 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:29 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:45 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:28:0%:51:1E0:42:28:10:18:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:45:0%:85:1E0:46:45:19:26:45 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:47:0%:89:1E0:43:47:20:27:47 0/0:0:0:0:0:28:0%:51:1E0:51:28:19:9:29 0/0:0:0:0:0:49:0%:93:1E0:40:49:27:22:50 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:19:15:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:23:13:36 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:42 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:23:0%:44:1E0:40:23:13:10:24 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:38:0%:70:1E0:45:38:16:22:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 0/0:0:0:0:0:45:0%:85:1E0:42:45:16:29:45 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:29 0/0:33:1:1:0:34:2.94%:51:5E-1:45:33:13:20:35 0/0:0:0:0:0:55:0%:99:1E0:42:55:26:29:56 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:43 0/0:0:0:0:0:19:0%:37:1E0:46:19:11:8:20 0/0:38:1:0:1:16:6.25%:21:5E-1:42:15:7:8:17 0/0:0:0:0:0:20:0%:36:1E0:49:20:11:9:21 0/0:0:0:0:0:26:0%:47:1E0:50:26:11:15:26 0/0:0:0:0:0:15:0%:29:1E0:45:15:10:5:15 0/0:0:0:0:0:39:0%:74:1E0:48:39:19:20:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:25:10:36 0/0:0:0:0:0:25:0%:48:1E0:40:25:12:13:25 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:45:0%:85:1E0:46:45:25:20:45 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:30:0%:55:1E0:44:30:17:13:30 0/0:0:0:0:0:52:0%:96:1E0:41:52:23:29:52 0/0:0:0:0:0:39:0%:74:1E0:40:39:20:19:42 0/0:60:1:0:1:22:4.55%:31:5E-1:49:21:7:14:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:39:1:1:0:32:3.12%:48:5E-1:45:31:21:10:32 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:34 0/0:0:0:0:0:23:0%:44:1E0:48:23:11:12:23 0/0:0:0:0:0:57:0%:99:1E0:41:57:37:20:58 0/0:60:1:0:1:32:3.12%:48:5E-1:42:31:15:16:32 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:46 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:33 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:25 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:21 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:34 0/0:0:0:0:0:31:0%:59:1E0:43:31:9:22:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:14:12:26 0/0:0:0:0:0:19:0%:37:1E0:43:19:6:13:19 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:36 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:34 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:35:0%:67:1E0:40:35:19:16:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:18:20:38 0/0:0:0:0:0:32:0%:59:1E0:36:32:19:13:33 0/0:0:0:0:0:38:0%:70:1E0:39:38:24:14:41 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:33 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:24 1/1:35:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:68:43:25:68:100%:99:1.6809E-40:0:0:0:0:69 0/0:0:0:0:0:53:0%:99:1E0:41:53:20:33:55 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:38:23:14:9:23 0/0:0:0:0:0:38:0%:70:1E0:37:38:27:11:40 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:36 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 0/0:0:0:0:0:49:0%:93:1E0:36:49:24:25:51 0/0:0:0:0:0:36:0%:66:1E0:39:36:18:18:36 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:39 0/0:0:0:0:0:35:0%:67:1E0:38:35:15:20:35 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:44 0/0:0:0:0:0:42:0%:77:1E0:39:42:27:15:43 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:39 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:42 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:31 0/0:0:0:0:0:39:0%:74:1E0:43:39:19:20:40 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:34 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:26:20:48 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:47 0/0:0:0:0:0:30:0%:55:1E0:40:30:20:10:31 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:30 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:35 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:48:0%:89:1E0:41:48:19:29:48 0/0:0:0:0:0:41:0%:78:1E0:43:41:23:18:41 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:38:0%:70:1E0:39:38:21:17:39 MTB_anc 4138377 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|glpK_Rv3696c|gene3772|transcript|Transcript_gene3772|Coding|1/1|c.1379C>T|p.Ala460Val|1379/1554|1379/1554|460/517||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4138377G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4138377G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:51:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:22:14:8:23:95.65%:99:2.9149E-12:37:1:1:0:23 1/1:45:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:52:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:50:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:27:18:9:28:96.43%:99:3.7915E-15:30:1:1:0:28 1/1:52:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:39:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:56:39:17:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 4139544 . A T . PASS AC=2;AF=6.757e-03;AN=296;ANN=T|stop_gained|HIGH|glpK_Rv3696c|gene3772|transcript|Transcript_gene3772|Coding|1/1|c.212T>A|p.Leu71*|212/1554|212/1554|71/517||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4139544A>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4139544A>T||||||;HOM=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:39:1:0:1:25:4%:38:5E-1:41:24:6:18:29 0/0:33:3:0:3:18:16.67%:14:1.1429E-1:50:15:3:12:21 0/0:36:2:0:2:30:6.67%:37:2.4576E-1:38:28:13:15:32 0/0:34:1:0:1:13:7.69%:18:5E-1:43:12:4:8:13 0/0:37:2:0:2:11:18.18%:10:2.381E-1:37:9:3:6:12 0/0:34:2:0:2:14:14.29%:12:2.4074E-1:43:12:5:7:16 0/0:0:0:0:0:24:0%:44:1E0:39:24:13:11:26 0/0:0:0:0:0:10:0%:17:1E0:41:10:7:3:13 0/0:0:0:0:0:16:0%:29:1E0:47:16:8:8:20 0/0:34:2:0:2:21:9.52%:25:2.439E-1:44:19:7:12:23 0/0:0:0:0:0:20:0%:36:1E0:46:20:13:7:22 0/0:33:2:0:2:19:10.53%:21:2.4324E-1:43:17:6:11:23 0/0:33:1:0:1:14:7.14%:17:5E-1:46:13:7:6:17 0/0:35:3:0:3:24:12.5%:22:1.1702E-1:43:21:8:13:25 0/0:33:3:0:3:15:20%:11:1.1207E-1:43:12:4:8:16 0/0:35:2:0:2:21:9.52%:25:2.439E-1:39:19:11:8:27 0/0:37:1:0:1:16:6.25%:21:5E-1:37:15:6:9:19 0/0:38:1:0:1:13:7.69%:18:5E-1:43:12:7:5:16 0/0:35:2:0:2:12:16.67%:10:2.3913E-1:36:10:8:2:15 0/0:37:1:0:1:10:10%:11:5E-1:55:9:2:7:12 0/0:0:0:0:0:19:0%:37:1E0:40:19:8:11:21 0/0:35:5:0:5:31:16.13%:24:2.6257E-2:40:26:11:15:32 0/0:35:1:0:1:13:7.69%:18:5E-1:38:12:5:7:16 0/0:31:3:0:3:28:10.71%:28:1.1818E-1:41:25:13:12:32 0/0:33:1:0:1:9:11.11%:11:5E-1:39:8:5:3:11 0/0:37:1:0:1:16:6.25%:21:5E-1:43:15:7:8:19 0/0:35:3:0:3:11:27.27%:7:1.0714E-1:41:8:4:4:11 0/0:35:1:0:1:9:11.11%:11:5E-1:37:8:4:4:9 0/0:0:0:0:0:9:0%:18:1E0:41:9:4:5:12 0/0:36:1:0:1:16:6.25%:21:5E-1:43:15:3:12:17 0/0:0:0:0:0:8:0%:14:1E0:41:8:2:6:9 0/0:33:2:0:2:20:10%:21:2.4359E-1:41:18:5:13:21 0/0:34:3:0:3:15:20%:11:1.1207E-1:43:12:6:6:16 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:15 0/0:33:3:0:3:21:14.29%:19:1.1585E-1:43:18:9:9:27 0/0:0:0:0:0:9:0%:18:1E0:44:9:4:5:13 0/0:33:1:0:1:15:6.67%:21:5E-1:41:14:6:8:19 0/0:35:3:0:3:30:10%:31:1.1864E-1:40:27:12:15:44 0/0:36:1:0:1:24:4.17%:34:5E-1:41:23:10:13:27 0/0:35:2:0:2:19:10.53%:21:2.4324E-1:40:17:12:5:21 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:25 0/0:37:1:0:1:19:5.26%:28:5E-1:40:18:6:12:20 0/0:0:0:0:0:11:0%:22:1E0:44:11:4:7:11 0/0:37:1:0:1:17:5.88%:24:5E-1:42:16:5:11:20 0/0:0:0:0:0:7:0%:14:1E0:42:7:2:5:11 0/0:33:1:0:1:16:6.25%:21:5E-1:41:15:6:9:16 0/0:0:0:0:0:17:0%:33:1E0:41:17:7:10:21 0/0:0:0:0:0:12:0%:21:1E0:41:12:3:9:13 0/0:0:0:0:0:11:0%:22:1E0:43:11:4:7:11 0/0:34:5:0:5:22:22.73%:12:2.4248E-2:40:17:8:9:23 0/0:0:0:0:0:9:0%:18:1E0:44:9:3:6:10 0/0:34:5:0:5:19:26.32%:10:2.3166E-2:39:14:4:10:19 0/0:36:3:0:3:16:18.75%:11:1.129E-1:40:13:8:5:18 0/0:35:2:0:2:14:14.29%:12:2.4074E-1:35:12:9:3:16 0/0:33:1:0:1:13:7.69%:18:5E-1:39:12:4:8:15 0/0:26:1:0:1:18:5.56%:24:5E-1:42:17:3:14:19 0/0:37:1:0:1:12:8.33%:14:5E-1:40:11:6:5:14 0/0:37:1:0:1:9:11.11%:11:5E-1:39:8:6:2:11 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:20 0/0:35:2:0:2:20:10%:21:2.4359E-1:41:18:8:10:25 0/0:0:0:0:0:13:0%:25:1E0:44:13:5:8:16 0/0:35:4:0:4:15:26.67%:8:4.9808E-2:40:11:5:6:17 0/0:35:5:1:4:25:20%:17:2.5076E-2:37:20:7:13:27 0/0:35:2:0:2:13:15.38%:13:2.4E-1:39:11:7:4:15 0/0:0:0:0:0:22:0%:40:1E0:41:22:7:15:25 0/1:35:8:0:8:29:27.59%:26:2.2392E-3:43:21:9:12:32 0/0:37:1:0:1:15:6.67%:21:5E-1:44:14:3:11:18 0/0:35:3:0:3:15:20%:11:1.1207E-1:45:12:5:7:18 0/0:35:1:0:1:11:9.09%:14:5E-1:46:10:3:7:11 0/0:33:1:0:1:10:10%:11:5E-1:37:9:6:3:13 0/0:0:0:0:0:16:0%:29:1E0:41:16:6:10:20 0/0:39:1:0:1:19:5.26%:28:5E-1:45:18:7:11:20 0/0:33:2:0:2:20:10%:21:2.4359E-1:44:18:7:11:20 0/0:33:1:0:1:17:5.88%:24:5E-1:40:16:7:9:20 0/0:37:1:0:1:17:5.88%:24:5E-1:36:16:10:6:19 0/0:0:0:0:0:8:0%:14:1E0:40:8:3:5:11 0/0:0:0:0:0:16:0%:29:1E0:40:16:3:13:20 0/0:33:3:0:3:24:12.5%:22:1.1702E-1:40:21:10:11:27 0/0:0:0:0:0:8:0%:14:1E0:48:8:2:6:9 0/0:33:1:0:1:12:8.33%:14:5E-1:40:11:8:3:13 0/0:0:0:0:0:12:0%:21:1E0:41:12:3:9:15 0/0:32:3:0:3:18:16.67%:14:1.1429E-1:38:15:5:10:21 0/0:33:1:0:1:19:5.26%:28:5E-1:39:18:5:13:21 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:17 0/0:33:2:0:2:11:18.18%:10:2.381E-1:39:9:5:4:13 0/0:35:2:0:2:12:16.67%:10:2.3913E-1:37:10:4:6:12 0/0:0:0:0:0:11:0%:22:1E0:41:11:5:6:12 0/0:37:1:0:1:14:7.14%:17:5E-1:44:13:5:8:15 0/0:37:1:0:1:23:4.35%:34:5E-1:42:22:11:11:29 0/0:0:0:0:0:13:0%:25:1E0:47:13:3:10:13 0/0:35:1:0:1:22:4.55%:31:5E-1:43:21:7:14:28 0/0:39:2:0:2:15:13.33%:16:2.4138E-1:45:13:6:7:17 0/0:38:1:0:1:15:6.67%:21:5E-1:39:14:5:9:16 0/0:35:3:0:3:12:25%:6:1.087E-1:43:9:5:4:13 0/0:35:3:0:3:24:12.5%:22:1.1702E-1:41:21:12:9:26 0/0:34:2:0:2:10:20%:7:2.3684E-1:43:8:5:3:11 0/0:33:1:0:1:10:10%:11:5E-1:38:9:2:7:12 0/0:37:1:0:1:18:5.56%:24:5E-1:37:17:8:9:20 0/0:33:1:0:1:15:6.67%:21:5E-1:41:14:6:8:18 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/0:37:2:0:2:24:8.33%:27:2.4468E-1:39:22:5:17:25 0/0:0:0:0:0:19:0%:37:1E0:38:19:9:10:21 0/0:0:0:0:0:15:0%:29:1E0:38:15:6:9:20 0/0:33:1:0:1:8:12.5%:8:5E-1:43:7:2:5:10 0/0:0:0:0:0:9:0%:18:1E0:47:9:2:7:10 0/0:34:3:0:3:16:18.75%:11:1.129E-1:40:13:7:6:19 0/0:35:2:0:2:17:11.76%:18:2.4242E-1:41:15:7:8:22 0/0:33:1:0:1:16:6.25%:21:5E-1:40:15:5:10:18 0/0:35:2:0:2:14:14.29%:12:2.4074E-1:44:12:3:9:15 0/0:33:1:0:1:18:5.56%:24:5E-1:41:17:6:11:20 0/0:37:1:0:1:13:7.69%:18:5E-1:41:12:2:10:14 0/0:33:1:0:1:11:9.09%:14:5E-1:40:10:5:5:12 0/0:33:2:0:2:24:8.33%:27:2.4468E-1:40:22:10:12:27 0/0:0:0:0:0:16:0%:29:1E0:37:16:10:6:19 0/0:35:1:0:1:17:5.88%:24:5E-1:35:16:8:8:20 0/0:36:2:0:2:13:15.38%:13:2.4E-1:36:11:6:5:14 0/0:33:1:0:1:21:4.76%:31:5E-1:38:20:9:11:22 0/0:0:0:0:0:13:0%:25:1E0:40:13:7:6:15 0/0:35:3:0:3:26:11.54%:25:1.1765E-1:39:23:11:12:28 0/1:34:7:0:7:40:17.5%:22:5.8688E-3:39:33:19:14:46 0/0:0:0:0:0:11:0%:22:1E0:46:11:5:6:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:39:1:0:1:22:4.55%:31:5E-1:36:21:13:8:28 0/0:33:2:0:2:19:10.53%:21:2.4324E-1:39:17:6:11:21 0/0:34:2:0:2:11:18.18%:10:2.381E-1:38:9:4:5:13 0/0:33:2:0:2:22:9.09%:24:2.4419E-1:41:20:9:11:24 0/0:31:3:0:3:18:16.67%:14:1.1429E-1:39:15:10:5:19 0/0:35:3:0:3:17:17.65%:14:1.1364E-1:41:14:6:8:19 0/0:31:2:0:2:16:12.5%:15:2.4194E-1:38:14:3:11:20 0/0:33:3:0:3:20:15%:16:1.1538E-1:38:17:3:14:22 0/0:35:2:0:2:23:8.7%:28:2.4444E-1:37:21:10:11:25 0/0:33:1:0:1:17:5.88%:24:5E-1:35:16:5:11:18 0/0:35:4:0:4:20:20%:13:5.3015E-2:40:16:9:7:23 0/0:33:3:0:3:10:30%:4:1.0526E-1:37:7:1:6:12 0/0:37:2:0:2:23:8.7%:28:2.4444E-1:40:21:5:16:24 0/0:35:4:0:4:23:17.39%:18:5.4264E-2:40:19:9:10:25 0/0:35:4:0:4:15:26.67%:8:4.9808E-2:38:11:6:5:16 0/0:37:2:0:2:23:8.7%:28:2.4444E-1:41:21:10:11:30 0/0:37:1:0:1:30:3.33%:44:5E-1:39:29:8:21:35 0/0:33:2:0:2:16:12.5%:15:2.4194E-1:43:14:9:5:20 0/0:33:2:0:2:18:11.11%:18:2.4286E-1:41:16:7:9:20 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:23 0/0:37:2:0:2:24:8.33%:27:2.4468E-1:40:22:12:10:30 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:22 0/0:35:3:0:3:16:18.75%:11:1.129E-1:37:13:8:5:17 0/0:0:0:0:0:18:0%:32:1E0:41:18:7:11:20 0/0:33:1:0:1:30:3.33%:44:5E-1:41:29:13:16:35 0/0:35:3:0:3:24:12.5%:22:1.1702E-1:40:21:9:12:28 0/0:0:0:0:0:20:0%:36:1E0:36:20:14:6:23 MTB_anc 4145737 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|etgB_Rv3703c|gene3780|transcript|Transcript_gene3780|Coding|1/1|c.1155C>T|p.Tyr385Tyr|1155/1278|1155/1278|385/425||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4145737G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4145737G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:44:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:39:11:28:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:47:21:26:48:97.92%:99:6.1512E-28:0:0:0:0:48 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:49:17:32:49:100%:99:3.925E-29:0:0:0:0:52 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:40:21:19:41:97.56%:99:9.3017E-24:0:0:0:0:42 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:14:14:29:96.55%:99:9.9776E-16:38:1:0:1:29 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:52:16:36:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:36:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 MTB_anc 4146314 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|etgB_Rv3703c|gene3780|transcript|Transcript_gene3780|Coding|1/1|c.578C>A|p.Pro193Gln|578/1278|578/1278|193/425||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4146314G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4146314G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:49:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:16:7:9:17:94.12%:81:7.7134E-9:38:1:1:0:17 1/1:44:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:41:12:29:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:33:17:16:34:97.06%:99:1.3852E-19:0:0:0:0:36 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:55:19:36:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:45:16:29:47:95.74%:99:1.1441E-25:37:1:0:1:47 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:61:24:37:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:24:6:18:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:44:14:30:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:55:17:38:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:38:36:8:28:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 MTB_anc 4149359 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv3705A_Rv3705A|gene3783|transcript|Transcript_gene3783|Coding|1/1|c.122T>C|p.Val41Ala|122/390|122/390|41/129||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4149359A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4149359A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:43 0/0:0:0:0:0:14:0%:25:1E0:51:14:5:9:14 0/0:0:0:0:0:49:0%:93:1E0:46:49:27:22:49 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:49:30:12:18:31 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:30 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:20 0/0:0:0:0:0:32:0%:59:1E0:47:32:21:11:32 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:46:0%:85:1E0:43:46:23:23:47 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:30 0/0:0:0:0:0:23:0%:44:1E0:40:23:15:8:23 0/0:0:0:0:0:16:0%:29:1E0:49:16:10:6:16 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:25 0/0:0:0:0:0:51:0%:97:1E0:43:51:24:27:52 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:12:22:34 0/0:0:0:0:0:22:0%:40:1E0:45:22:13:9:22 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:25 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:35 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:35 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:32 0/0:0:0:0:0:38:0%:70:1E0:49:38:21:17:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:37:0%:70:1E0:46:37:12:25:38 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:55:0%:99:1E0:49:55:23:32:57 0/0:0:0:0:0:56:0%:99:1E0:46:56:27:29:59 0/0:0:0:0:0:52:0%:96:1E0:43:52:28:24:53 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:51:0%:97:1E0:45:51:27:24:52 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:23 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:32 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:47 0/0:60:1:1:0:36:2.78%:55:5E-1:43:35:18:17:37 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:20:14:34 0/0:0:0:0:0:43:0%:82:1E0:47:43:23:20:44 0/0:0:0:0:0:20:0%:36:1E0:48:20:9:11:20 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:43 0/0:0:0:0:0:23:0%:44:1E0:45:23:13:10:23 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:31 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:21 0/0:0:0:0:0:40:0%:74:1E0:45:40:16:24:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:24:13:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:35:0%:67:1E0:46:35:21:14:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:17:10:27 0/0:0:0:0:0:42:0%:77:1E0:45:42:28:14:42 0/0:0:0:0:0:49:0%:93:1E0:45:49:24:25:50 0/0:0:0:0:0:20:0%:36:1E0:47:20:15:5:22 0/0:0:0:0:0:38:0%:70:1E0:46:38:15:23:38 0/0:0:0:0:0:64:0%:99:1E0:46:64:33:31:64 0/0:0:0:0:0:19:0%:37:1E0:42:19:15:4:20 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:42 0/0:34:1:1:0:26:3.85%:38:5E-1:43:25:15:10:26 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:38:0%:70:1E0:47:38:26:12:38 0/0:0:0:0:0:28:0%:51:1E0:50:28:15:13:29 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:43:0%:82:1E0:49:43:23:20:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:43 0/0:0:0:0:0:32:0%:59:1E0:43:32:21:11:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:18:18:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:27 0/0:0:0:0:0:22:0%:40:1E0:43:22:15:7:22 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:24:7:31 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:34 0/0:0:0:0:0:14:0%:25:1E0:46:14:9:5:14 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:39:0%:74:1E0:50:39:16:23:39 0/0:0:0:0:0:25:0%:48:1E0:50:25:14:11:25 0/0:0:0:0:0:55:0%:99:1E0:40:55:33:22:55 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:58:0%:99:1E0:43:58:30:28:59 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:33:0%:63:1E0:47:33:17:16:35 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:35:0%:67:1E0:41:35:24:11:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:25 0/0:0:0:0:0:40:0%:74:1E0:45:40:22:18:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:21 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:30 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:43:30:20:10:31 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:36 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:41 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:54:0%:99:1E0:40:54:32:22:57 0/0:0:0:0:0:51:0%:97:1E0:39:51:28:23:54 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:34 0/0:0:0:0:0:18:0%:32:1E0:39:18:10:8:19 0/0:0:0:0:0:55:0%:99:1E0:40:55:30:25:56 0/0:0:0:0:0:47:0%:89:1E0:41:47:26:21:47 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:47:0%:89:1E0:40:47:35:12:49 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:40 0/0:0:0:0:0:41:0%:78:1E0:40:41:14:27:43 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:47 0/0:0:0:0:0:47:0%:89:1E0:39:47:28:19:47 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:37 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:41 0/0:0:0:0:0:43:0%:82:1E0:39:43:19:24:44 0/0:0:0:0:0:40:0%:74:1E0:41:40:24:16:41 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:20:12:32 0/0:0:0:0:0:53:0%:99:1E0:37:53:30:23:53 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:51:0%:97:1E0:41:51:31:20:51 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:35 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:44 0/0:0:0:0:0:28:0%:51:1E0:45:28:16:12:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:22:13:36 0/0:0:0:0:0:56:0%:99:1E0:44:56:31:25:57 0/0:0:0:0:0:58:0%:99:1E0:40:58:29:29:58 0/0:0:0:0:0:35:0%:67:1E0:41:35:12:23:37 MTB_anc 4156239 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|dnaQ_Rv3711c|gene3789|transcript|Transcript_gene3789|Coding|1/1|c.491C>T|p.Ala164Val|491/990|491/990|164/329||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4156239G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.4156239G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:51:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:63:42:21:63:100%:99:1.657E-37:0:0:0:0:64 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:50:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:25:10:15:26:96.15%:99:5.4444E-14:37:1:1:0:28 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:51 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:59:24:35:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:38:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:38:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 MTB_anc 4156503 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|dnaQ_Rv3711c|gene3789|transcript|Transcript_gene3789|Coding|1/1|c.227A>G|p.Asp76Gly|227/990|227/990|76/329||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4156503T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.4156503T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:51:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:48:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:22:11:11:24:91.67%:99:1.0078E-11:47:2:0:2:24 1/1:51:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:47:31:14:17:32:96.88%:99:1.8007E-17:60:1:1:0:32 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:30:19:11:31:96.77%:99:6.8754E-17:32:1:0:1:32 1/1:48:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:63:30:33:63:100%:99:1.657E-37:0:0:0:0:64 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:51:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:40:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:48:24:24:49:97.96%:99:1.554E-28:0:0:0:0:49 1/1:51:15:12:3:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:40:18:22:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:46:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:19:9:10:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:36 MTB_anc 4156578 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|dnaQ_Rv3711c|gene3789|transcript|Transcript_gene3789|Coding|1/1|c.152T>C|p.Val51Ala|152/990|152/990|51/329||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4156578A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.4156578A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:44:39:28:11:39 0/0:0:0:0:0:12:0%:21:1E0:44:12:5:7:12 0/0:0:0:0:0:51:0%:97:1E0:47:51:29:22:51 0/0:0:0:0:0:16:0%:29:1E0:44:16:8:8:17 0/0:0:0:0:0:26:0%:47:1E0:48:26:13:13:26 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:17:0%:33:1E0:44:17:8:9:18 0/0:0:0:0:0:20:0%:36:1E0:48:20:13:7:20 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:38:0%:70:1E0:46:38:24:14:38 0/0:0:0:0:0:16:0%:29:1E0:50:16:8:8:16 0/0:0:0:0:0:38:0%:70:1E0:46:38:17:21:38 0/0:0:0:0:0:19:0%:37:1E0:42:19:11:8:19 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 0/0:0:0:0:0:18:0%:32:1E0:47:18:8:10:20 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:20 0/0:0:0:0:0:20:0%:36:1E0:51:20:12:8:20 0/0:0:0:0:0:22:0%:40:1E0:48:22:10:12:22 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:52:0%:96:1E0:45:52:25:27:53 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:30 0/0:0:0:0:0:42:0%:77:1E0:45:42:26:16:42 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:24 0/0:0:0:0:0:21:0%:40:1E0:44:21:10:11:21 0/0:0:0:0:0:20:0%:36:1E0:47:20:14:6:20 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:34 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:34 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:17:11:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:18:9:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:55:0%:99:1E0:49:55:28:27:55 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:51:0%:97:1E0:46:51:31:20:51 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:35 0/0:0:0:0:0:25:0%:48:1E0:44:25:13:12:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:28 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:24:20:44 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:39 0/0:0:0:0:0:37:0%:70:1E0:48:37:16:21:37 0/0:0:0:0:0:22:0%:40:1E0:51:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:36 0/0:0:0:0:0:15:0%:29:1E0:53:15:12:3:15 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:47:29:10:19:30 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:42 0/0:0:0:0:0:26:0%:47:1E0:43:26:17:9:28 0/0:0:0:0:0:20:0%:36:1E0:42:20:10:10:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:33 0/0:0:0:0:0:26:0%:47:1E0:49:26:11:15:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:21:17:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:36:0%:66:1E0:45:36:24:12:36 0/0:0:0:0:0:49:0%:93:1E0:45:49:27:22:49 0/0:0:0:0:0:11:0%:22:1E0:49:11:5:6:13 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:41 0/0:0:0:0:0:14:0%:25:1E0:49:14:10:4:15 0/0:0:0:0:0:17:0%:33:1E0:45:17:10:7:19 0/0:0:0:0:0:27:0%:52:1E0:50:27:11:16:28 0/0:0:0:0:0:21:0%:40:1E0:55:21:14:7:21 0/0:0:0:0:0:19:0%:37:1E0:51:19:11:8:19 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:41:0%:78:1E0:46:41:18:23:41 0/0:0:0:0:0:30:0%:55:1E0:42:30:13:17:30 0/0:0:0:0:0:31:0%:59:1E0:48:31:24:7:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:20 0/0:0:0:0:0:18:0%:32:1E0:43:18:11:7:18 0/0:0:0:0:0:24:0%:44:1E0:45:24:15:9:25 0/0:0:0:0:0:26:0%:47:1E0:41:26:12:14:28 0/0:0:0:0:0:35:0%:67:1E0:50:35:23:12:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:37 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:34 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:36 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:15:0%:29:1E0:52:15:8:7:15 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:23:0%:44:1E0:52:23:9:14:23 0/0:0:0:0:0:42:0%:77:1E0:44:42:27:15:43 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:23 0/0:0:0:0:0:49:0%:93:1E0:42:49:16:33:49 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:9:23:34 0/0:0:0:0:0:37:0%:70:1E0:47:37:18:19:39 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:35 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:41:0%:78:1E0:44:41:26:15:41 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:17:0%:33:1E0:40:17:6:11:17 0/0:0:0:0:0:28:0%:51:1E0:44:28:23:5:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:24 0/0:0:0:0:0:36:0%:66:1E0:45:36:16:20:36 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:17:0%:33:1E0:44:17:4:13:17 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:17 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:28:0%:51:1E0:41:28:19:9:28 0/0:0:0:0:0:29:0%:55:1E0:39:29:15:14:30 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:14:0%:25:1E0:42:14:5:9:15 0/0:0:0:0:0:49:0%:93:1E0:42:49:29:20:49 0/0:0:0:0:0:51:0%:97:1E0:41:51:35:16:51 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:15:24:41 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:29 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:40 0/0:0:0:0:0:50:0%:92:1E0:43:50:29:21:50 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:30 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:38 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:37 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:23 0/0:0:0:0:0:23:0%:44:1E0:42:23:11:12:23 0/0:0:0:0:0:49:0%:93:1E0:41:49:25:24:51 0/0:0:0:0:0:36:0%:66:1E0:44:36:22:14:37 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:26 0/0:0:0:0:0:44:0%:81:1E0:40:44:19:25:44 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:19:0%:37:1E0:42:19:10:9:19 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:29 0/0:0:0:0:0:18:0%:32:1E0:44:18:11:7:18 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:43 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:33 MTB_anc 4158361 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|cobQ2_Rv3713|gene3791|transcript|Transcript_gene3791|Coding|1/1|c.135G>A|p.Pro45Pro|135/696|135/696|45/231||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4158361G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4158361G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:54:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:53:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:50:24:26:51:98.04%:99:9.9117E-30:0:0:0:0:51 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:50:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:43:13:30:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:17:19:37:97.3%:99:2.1762E-20:39:1:1:0:37 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:57:33:24:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:40:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:44:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:71:30:41:71:100%:99:2.6835E-42:0:0:0:0:75 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 MTB_anc 4166890 . G A . PASS AC=4;AF=0.013;AN=300;ANN=A|synonymous_variant|LOW|Rv3722c_Rv3722c|gene3800|transcript|Transcript_gene3800|Coding|1/1|c.1239C>T|p.Cys413Cys|1239/1308|1239/1308|413/435||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4166890G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4166890G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:15:0%:29:1E0:52:15:7:8:15 0/0:0:0:0:0:42:0%:77:1E0:47:42:21:21:42 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:50:33:16:17:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:11:21:32 0/0:0:0:0:0:24:0%:44:1E0:53:24:13:11:25 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:43:0%:82:1E0:38:43:22:21:43 0/0:0:0:0:0:18:0%:32:1E0:49:18:7:11:18 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:24:0%:44:1E0:40:24:15:9:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:37:0%:70:1E0:47:37:17:20:37 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:53:0%:99:1E0:39:53:28:25:53 0/0:0:0:0:0:24:0%:44:1E0:45:24:12:12:24 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:18:0%:32:1E0:47:18:13:5:18 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:0:11:0%:22:1E0:48:11:6:5:11 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:15:16:31 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:39 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:37:0%:70:1E0:43:37:10:27:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:37 0/0:0:0:0:0:60:0%:99:1E0:44:60:30:30:60 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:40 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:15:11:26 0/0:0:0:0:0:23:0%:44:1E0:41:23:14:9:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:33 0/0:0:0:0:0:28:0%:51:1E0:41:28:18:10:29 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:42 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:37 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:19 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:25 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:26 0/0:0:0:0:0:49:0%:93:1E0:42:49:27:22:49 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 0/0:0:0:0:0:19:0%:37:1E0:42:19:7:12:20 0/0:0:0:0:0:39:0%:74:1E0:40:39:22:17:40 0/0:0:0:0:0:42:0%:77:1E0:45:42:21:21:43 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:41:0%:78:1E0:42:41:27:14:41 0/0:0:0:0:0:37:0%:70:1E0:45:37:18:19:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:18:13:31 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:58:0%:99:1E0:44:58:26:32:58 0/0:0:0:0:0:18:0%:32:1E0:39:18:5:13:18 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:19:0%:37:1E0:45:19:12:7:19 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:23 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:34 0/0:0:0:0:0:24:0%:44:1E0:47:24:16:8:24 0/0:0:0:0:0:29:0%:55:1E0:50:29:9:20:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:15:22:38 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:26:0%:47:1E0:42:26:14:12:26 0/0:0:0:0:0:35:0%:67:1E0:45:35:15:20:35 0/0:0:0:0:0:33:0%:63:1E0:38:33:23:10:33 0/0:0:0:0:0:25:0%:48:1E0:42:25:15:10:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:20:0%:36:1E0:48:20:6:14:20 0/0:0:0:0:0:17:0%:33:1E0:37:17:12:5:17 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:35 0/0:0:0:0:0:23:0%:44:1E0:42:23:15:8:24 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:21 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:27 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:42:0%:77:1E0:46:42:26:16:42 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:42 0/0:0:0:0:0:34:0%:62:1E0:42:34:16:18:34 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:47 0/0:0:0:0:0:21:0%:40:1E0:41:21:10:11:21 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:19 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:45:0%:85:1E0:39:45:26:19:47 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:40 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:26 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:48 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 1/1:40:29:15:14:30:96.67%:99:2.6212E-16:27:1:1:0:31 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:31 0/0:0:0:0:0:34:0%:62:1E0:40:34:17:17:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:43:0%:82:1E0:43:43:20:23:43 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:18 0/0:0:0:0:0:17:0%:33:1E0:38:17:8:9:18 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:35 0/0:0:0:0:0:41:0%:78:1E0:39:41:24:17:42 0/0:0:0:0:0:32:0%:59:1E0:40:32:20:12:33 0/0:0:0:0:0:38:0%:70:1E0:39:38:16:22:38 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:20 0/0:0:0:0:0:65:0%:99:1E0:41:65:31:34:65 0/0:0:0:0:0:61:0%:99:1E0:40:61:30:31:62 0/0:0:0:0:0:28:0%:51:1E0:38:28:18:10:28 0/0:0:0:0:0:20:0%:36:1E0:39:20:10:10:20 0/0:0:0:0:0:42:0%:77:1E0:38:42:24:18:45 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:50:0%:92:1E0:39:50:31:19:54 0/0:0:0:0:0:35:0%:67:1E0:36:35:15:20:37 0/0:0:0:0:0:43:0%:82:1E0:39:43:24:19:44 0/0:0:0:0:0:32:0%:59:1E0:40:32:21:11:37 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:41 0/0:0:0:0:0:33:0%:63:1E0:37:33:18:15:33 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:36 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:44 0/0:0:0:0:0:35:0%:67:1E0:38:35:23:12:39 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:35 0/0:0:0:0:0:49:0%:93:1E0:37:49:35:14:50 0/0:0:0:0:0:29:0%:55:1E0:37:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:29 0/0:0:0:0:0:41:0%:78:1E0:38:41:27:14:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:43 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:20:17:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:22 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:31 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:46 0/0:0:0:0:0:57:0%:99:1E0:40:57:36:21:57 0/0:0:0:0:0:35:0%:67:1E0:38:35:19:16:35 MTB_anc 4170518 . C A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv3725_Rv3725|gene3804|transcript|Transcript_gene3804|Coding|1/1|c.305C>A|p.Ala102Asp|305/930|305/930|102/309||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4170518C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4170518C>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:46 0/0:0:0:0:0:20:0%:36:1E0:44:20:6:14:20 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:52 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:40 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:37:0%:70:1E0:41:37:26:11:42 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:40 0/0:0:0:0:0:49:0%:93:1E0:40:49:27:22:53 0/0:0:0:0:0:11:0%:22:1E0:37:11:7:4:14 0/0:0:0:0:0:49:0%:93:1E0:40:49:22:27:55 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:29 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:24 0/0:0:0:0:0:18:0%:32:1E0:40:18:13:5:20 0/0:0:0:0:0:26:0%:47:1E0:36:26:14:12:28 0/0:0:0:0:0:21:0%:40:1E0:40:21:12:9:23 0/0:0:0:0:0:20:0%:36:1E0:41:20:12:8:21 0/0:0:0:0:0:19:0%:37:1E0:37:19:9:10:25 0/0:0:0:0:0:45:0%:85:1E0:39:45:20:25:53 0/0:30:1:0:1:24:4.17%:34:5E-1:41:23:9:14:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:33 0/0:0:0:0:0:21:0%:40:1E0:37:21:11:10:23 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:27 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:40 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:20 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:35 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:34 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:34 0/0:0:0:0:0:18:0%:32:1E0:38:18:7:11:21 0/0:0:0:0:0:31:0%:59:1E0:39:31:19:12:32 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:35 0/0:0:0:0:0:27:0%:52:1E0:37:27:17:10:30 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:40 0/0:29:1:1:0:47:2.13%:77:5E-1:44:46:25:21:51 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:42 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:47 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:33 0/0:0:0:0:0:45:0%:85:1E0:39:45:27:18:49 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:25 0/0:0:0:0:0:35:0%:67:1E0:37:35:16:19:38 0/0:0:0:0:0:22:0%:40:1E0:38:22:12:10:26 0/0:0:0:0:0:26:0%:47:1E0:38:26:16:10:28 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:34 0/0:0:0:0:0:40:0%:74:1E0:37:40:24:16:43 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:38 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:29 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:41 0/0:0:0:0:0:18:0%:32:1E0:40:18:10:8:23 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:30 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:32 0/0:0:0:0:0:49:0%:93:1E0:40:49:20:29:54 0/0:0:0:0:0:41:0%:78:1E0:40:41:23:18:43 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:36:0%:66:1E0:37:36:19:17:38 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:39 0/0:0:0:0:0:25:0%:48:1E0:38:25:19:6:30 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:19:7:30 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:41 0/0:0:0:0:0:57:0%:99:1E0:43:57:33:24:64 0/0:0:0:0:0:29:0%:55:1E0:38:29:18:11:29 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:22 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:29 0/0:0:0:0:0:37:0%:70:1E0:45:37:21:16:41 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:26 0/0:0:0:0:0:13:0%:25:1E0:44:13:7:6:14 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:38 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:39 0/0:0:0:0:0:30:0%:55:1E0:39:30:14:16:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:23:0%:44:1E0:38:23:10:13:27 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:25 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:28 0/0:0:0:0:0:50:0%:92:1E0:41:50:28:22:52 0/0:0:0:0:0:21:0%:40:1E0:38:21:13:8:25 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:31 0/0:0:0:0:0:20:0%:36:1E0:37:20:5:15:25 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:28 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:27 0/0:0:0:0:0:13:0%:25:1E0:41:13:5:8:17 0/0:0:0:0:0:29:0%:55:1E0:47:29:9:20:32 0/0:0:0:0:0:24:0%:44:1E0:40:24:13:11:27 0/0:0:0:0:0:28:0%:51:1E0:39:28:22:6:30 0/0:60:1:0:1:20:5%:27:5E-1:43:19:8:11:22 0/0:0:0:0:0:50:0%:92:1E0:40:50:28:22:54 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:37 0/0:0:0:0:0:37:0%:70:1E0:39:37:27:10:43 0/0:0:0:0:0:17:0%:33:1E0:38:17:7:10:19 0/0:0:0:0:0:33:0%:63:1E0:38:33:21:12:38 0/0:0:0:0:0:27:0%:52:1E0:36:27:16:11:30 0/0:0:0:0:0:25:0%:48:1E0:35:25:16:9:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:36:0%:66:1E0:39:36:24:12:39 0/0:0:0:0:0:31:0%:59:1E0:36:31:12:19:37 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:24 0/0:0:0:0:0:15:0%:29:1E0:46:15:12:3:17 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:23 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:31 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:44 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:37 0/0:0:0:0:0:44:0%:81:1E0:39:44:27:17:47 0/0:0:0:0:0:34:0%:62:1E0:39:34:16:18:38 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:34 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:37 0/0:0:0:0:0:36:0%:66:1E0:38:36:17:19:41 0/0:0:0:0:0:44:0%:81:1E0:38:44:16:28:46 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:12:17:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:30 0/0:0:0:0:0:46:0%:85:1E0:38:46:27:19:51 0/0:0:0:0:0:48:0%:89:1E0:41:48:23:25:54 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:31 0/0:0:0:0:0:20:0%:36:1E0:41:20:9:11:20 0/0:0:0:0:0:38:0%:70:1E0:36:38:16:22:46 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:45 0/0:0:0:0:0:50:0%:92:1E0:36:50:26:24:57 0/0:0:0:0:0:41:0%:78:1E0:37:41:18:23:49 0/0:0:0:0:0:39:0%:74:1E0:39:39:18:21:46 0/0:0:0:0:0:40:0%:74:1E0:37:40:19:21:49 0/0:0:0:0:0:38:0%:70:1E0:38:38:16:22:51 0/0:0:0:0:0:43:0%:82:1E0:37:43:17:26:47 0/0:0:0:0:0:43:0%:82:1E0:38:43:19:24:52 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:35 0/0:0:0:0:0:33:0%:63:1E0:35:33:15:18:35 0/0:0:0:0:0:37:0%:70:1E0:38:37:13:24:41 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:32 0/0:0:0:0:0:55:0%:99:1E0:35:55:19:36:66 0/0:0:0:0:0:21:0%:40:1E0:36:21:8:13:26 0/0:0:0:0:0:38:0%:70:1E0:38:38:19:19:40 0/0:0:0:0:0:36:0%:66:1E0:37:36:19:17:39 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:29 0/0:0:0:0:0:29:0%:55:1E0:36:29:15:14:30 0/0:0:0:0:0:33:0%:63:1E0:36:33:17:16:37 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:42 0/0:45:3:1:2:32:9.38%:34:1.1905E-1:41:29:14:15:35 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:45 0/0:38:1:0:1:46:2.17%:73:5E-1:42:45:23:22:53 0/0:0:0:0:0:38:0%:70:1E0:35:38:19:19:47 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:31 MTB_anc 4173384 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv3727_Rv3727|gene3806|transcript|Transcript_gene3806|Coding|1/1|c.430G>T|p.Val144Leu|430/1809|430/1809|144/602||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4173384G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4173384G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:14:14:29:96.55%:99:1.3074E-16:0:0:0:0:30 1/1:51:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:19:11:8:20:95%:98:1.5234E-10:33:1:1:0:20 1/1:45:31:12:19:32:96.88%:99:1.8007E-17:34:1:1:0:33 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:63:33:30:63:100%:99:1.657E-37:0:0:0:0:63 1/1:44:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:40:20:20:41:97.56%:99:9.8874E-23:39:1:1:0:41 1/1:45:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:52:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:47:27:15:12:29:93.1%:99:1.5465E-14:48:2:1:1:30 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:47:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:51 1/1:43:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:21:14:36:97.22%:99:8.3613E-20:39:1:1:0:36 1/1:39:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:11:20:33:93.94%:99:8.2416E-17:38:2:2:0:34 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 MTB_anc 4176997 . G A . PASS AC=18;AF=0.060;AN=300;ANN=A|missense_variant|MODERATE|Rv3728_Rv3728|gene3807|transcript|Transcript_gene3807|Coding|1/1|c.2125G>A|p.Asp709Asn|2125/3198|2125/3198|709/1065||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4176997G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4176997G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:43:48:27:21:48 0/0:0:0:0:0:14:0%:25:1E0:50:14:8:6:14 0/0:0:0:0:0:50:0%:92:1E0:47:50:25:25:50 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:60:1:1:0:24:4.17%:34:5E-1:44:23:12:11:24 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:27 0/0:0:0:0:0:23:0%:44:1E0:44:23:9:14:23 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:20 0/0:36:1:1:0:24:4.17%:34:5E-1:46:23:11:12:24 0/0:0:0:0:0:14:0%:25:1E0:45:14:7:7:14 0/0:0:0:0:0:45:0%:85:1E0:41:45:19:26:46 0/0:0:0:0:0:10:0%:17:1E0:46:10:6:4:11 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:48 1/1:40:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:27 0/0:0:0:0:0:19:0%:37:1E0:50:19:9:10:19 0/0:0:0:0:0:14:0%:25:1E0:46:14:8:6:14 1/1:49:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:43:0%:82:1E0:42:43:26:17:43 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:34:0%:62:1E0:42:34:23:11:35 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:22 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:27 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:21 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:32 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:28 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:26 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:40:36:15:21:37 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:0:0:0:0:55:0%:99:1E0:44:55:25:30:56 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:50:0%:92:1E0:44:50:23:27:50 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 0/0:38:1:1:0:35:2.86%:55:5E-1:42:34:20:14:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:43 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:42 0/0:0:0:0:0:40:0%:74:1E0:42:40:23:17:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:21:19:40 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:47:0%:89:1E0:43:47:26:21:47 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:32 0/0:0:0:0:0:27:0%:52:1E0:39:27:16:11:28 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:52 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:39 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:24 0/0:0:0:0:0:31:0%:59:1E0:42:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:24:0%:44:1E0:44:24:8:16:24 0/0:0:0:0:0:35:0%:67:1E0:41:35:15:20:35 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:19:11:30 0/0:60:1:1:0:45:2.22%:73:5E-1:44:44:23:21:46 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:16:0%:29:1E0:42:16:6:10:18 0/0:0:0:0:0:27:0%:52:1E0:46:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:21:0%:40:1E0:44:21:12:9:21 0/0:0:0:0:0:30:0%:55:1E0:50:30:20:10:30 0/0:0:0:0:0:45:0%:85:1E0:41:45:27:18:45 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:25 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:17:0%:33:1E0:39:17:9:8:17 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:38 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:40 0/0:0:0:0:0:15:0%:29:1E0:44:15:6:9:15 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:22 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:16:0%:29:1E0:45:16:10:6:16 0/0:0:0:0:0:21:0%:40:1E0:48:21:11:10:21 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:18 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:26 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:46 0/0:0:0:0:0:21:0%:40:1E0:39:21:11:10:21 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:49 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:37:0%:70:1E0:38:37:21:16:38 0/0:0:0:0:0:36:0%:66:1E0:40:36:25:11:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:14:21:35 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:39 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:35 0/0:38:1:1:0:38:2.63%:58:5E-1:39:37:23:14:39 0/0:0:0:0:0:8:0%:14:1E0:36:8:3:5:9 0/0:0:0:0:0:34:0%:62:1E0:45:34:15:19:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:12:21:34 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:39:27:15:12:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:34:0%:62:1E0:39:34:15:19:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:33 0/0:0:0:0:0:27:0%:52:1E0:39:27:17:10:27 0/0:0:0:0:0:45:0%:85:1E0:39:45:23:22:46 0/0:0:0:0:0:34:0%:62:1E0:39:34:13:21:34 0/0:0:0:0:0:31:0%:59:1E0:42:31:14:17:31 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:21 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:39 0/0:0:0:0:0:66:0%:99:1E0:40:66:36:30:66 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:31 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:45:0%:85:1E0:37:45:30:15:48 0/0:0:0:0:0:30:0%:55:1E0:38:30:19:11:30 0/0:0:0:0:0:39:0%:74:1E0:39:39:21:18:39 0/0:0:0:0:0:33:0%:63:1E0:36:33:19:14:34 0/0:0:0:0:0:49:0%:93:1E0:37:49:24:25:51 0/0:0:0:0:0:35:0%:67:1E0:39:35:16:19:36 0/0:0:0:0:0:38:0%:70:1E0:39:38:22:16:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:37:29:17:12:29 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:0:0:0:0:14:0%:25:1E0:44:14:9:5:14 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:25 0/0:0:0:0:0:41:0%:78:1E0:37:41:20:21:42 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:38 0/0:0:0:0:0:34:0%:62:1E0:38:34:15:19:34 0/0:0:0:0:0:46:0%:85:1E0:40:46:24:22:47 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:23 0/0:37:1:1:0:24:4.17%:34:5E-1:44:23:14:9:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:30 0/0:0:0:0:0:43:0%:82:1E0:41:43:15:28:43 0/0:0:0:0:0:22:0%:40:1E0:42:22:15:7:22 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:48:0%:89:1E0:40:48:27:21:48 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:25 MTB_anc 4177280 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3728_Rv3728|gene3807|transcript|Transcript_gene3807|Coding|1/1|c.2408C>A|p.Ser803Tyr|2408/3198|2408/3198|803/1065||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4177280C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4177280C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:53:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:45:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:52:18:34:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:52:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:48:57:21:36:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:63:32:31:63:100%:99:1.657E-37:0:0:0:0:63 1/1:48:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:51:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:62:26:36:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:44:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:42:65:44:21:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:41:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:45:30:14:16:31:96.77%:99:6.8754E-17:37:1:1:0:32 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:22:11:11:23:95.65%:99:2.9149E-12:38:1:0:1:23 MTB_anc 4177945 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv3728_Rv3728|gene3807|transcript|Transcript_gene3807|Coding|1/1|c.3073G>A|p.Val1025Met|3073/3198|3073/3198|1025/1065||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4177945G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4177945G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:45:52:28:24:52 0/0:0:0:0:0:15:0%:29:1E0:49:15:8:7:15 0/0:0:0:0:0:46:0%:85:1E0:45:46:18:28:46 0/0:0:0:0:0:33:0%:63:1E0:48:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:34:0%:62:1E0:53:34:26:8:34 0/0:0:0:0:0:29:0%:55:1E0:45:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:51:29:16:13:29 0/0:0:0:0:0:35:0%:67:1E0:51:35:16:19:35 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:41:0%:78:1E0:45:41:23:18:41 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:23 0/0:0:0:0:0:57:0%:99:1E0:47:57:39:18:57 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:41:25:14:11:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:16:12:28 0/0:60:1:1:0:29:3.45%:45:5E-1:48:28:11:17:29 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:21:0%:40:1E0:47:21:12:9:22 0/0:0:0:0:0:50:0%:92:1E0:43:50:23:27:50 0/0:0:0:0:0:33:0%:63:1E0:47:33:18:15:33 0/0:0:0:0:0:41:0%:78:1E0:49:41:19:22:41 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:21:0%:40:1E0:46:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:34 0/0:0:0:0:0:38:0%:70:1E0:49:38:21:17:38 0/0:0:0:0:0:32:0%:59:1E0:48:32:20:12:32 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:21:14:36 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:39 0/0:0:0:0:0:58:0%:99:1E0:48:58:29:29:58 0/0:38:1:1:0:44:2.27%:69:5E-1:46:43:21:22:45 0/0:0:0:0:0:42:0%:77:1E0:48:42:21:21:42 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 0/0:0:0:0:0:27:0%:52:1E0:45:27:9:18:28 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:34:0%:62:1E0:46:34:12:22:34 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:52:0%:96:1E0:41:52:26:26:52 0/0:0:0:0:0:41:0%:78:1E0:42:41:18:23:42 0/0:0:0:0:0:47:0%:89:1E0:46:47:23:24:47 0/0:0:0:0:0:23:0%:44:1E0:49:23:15:8:24 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:32 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:26 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:41 0/0:0:0:0:0:31:0%:59:1E0:39:31:21:10:31 0/0:0:0:0:0:52:0%:96:1E0:43:52:31:21:54 0/0:0:0:0:0:51:0%:97:1E0:43:51:29:22:51 0/0:0:0:0:0:29:0%:55:1E0:49:29:17:12:29 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:37:0%:70:1E0:46:37:23:14:37 0/0:0:0:0:0:46:0%:85:1E0:45:46:22:24:46 0/0:0:0:0:0:44:0%:81:1E0:43:44:28:16:45 0/0:0:0:0:0:29:0%:55:1E0:48:29:17:12:29 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:43 0/0:0:0:0:0:50:0%:92:1E0:46:50:28:22:50 0/0:0:0:0:0:23:0%:44:1E0:48:23:9:14:23 0/0:0:0:0:0:36:0%:66:1E0:46:36:18:18:36 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:17:0%:33:1E0:51:17:10:7:17 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:24:0%:44:1E0:51:24:15:9:24 0/0:0:0:0:0:16:0%:29:1E0:49:16:9:7:16 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:48 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:26:0%:47:1E0:44:26:19:7:26 0/0:0:0:0:0:40:0%:74:1E0:45:40:25:15:40 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:46:0%:85:1E0:45:46:25:21:46 0/0:0:0:0:0:44:0%:81:1E0:43:44:22:22:44 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:42 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:29:0%:55:1E0:48:29:19:10:29 0/0:0:0:0:0:15:0%:29:1E0:46:15:6:9:15 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:53:28:12:16:28 0/0:0:0:0:0:46:0%:85:1E0:40:46:30:16:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:29 0/0:0:0:0:0:53:0%:99:1E0:45:53:30:23:53 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:28 0/0:0:0:0:0:35:0%:67:1E0:44:35:23:12:35 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 0/0:0:0:0:0:42:0%:77:1E0:45:42:24:18:43 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:40:0%:74:1E0:44:40:21:19:40 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:19:11:31 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:37 0/0:0:0:0:0:30:0%:55:1E0:42:30:18:12:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:27:0%:52:1E0:49:27:15:12:28 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:27:0%:52:1E0:41:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:35 0/0:0:0:0:0:47:0%:89:1E0:39:47:27:20:48 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:47 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:24:10:34 0/0:0:0:0:0:26:0%:47:1E0:39:26:10:16:26 0/0:0:0:0:0:65:0%:99:1E0:42:65:37:28:65 0/0:0:0:0:0:62:0%:99:1E0:43:62:33:29:62 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:62:0%:99:1E0:42:62:31:31:62 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:42 0/0:0:0:0:0:54:0%:99:1E0:44:54:31:23:54 0/0:0:0:0:0:42:0%:77:1E0:38:42:16:26:44 0/0:0:0:0:0:49:0%:93:1E0:40:49:23:26:50 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:41 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:45 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:51:0%:97:1E0:41:51:27:24:52 0/0:0:0:0:0:41:0%:78:1E0:41:41:26:15:42 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:55:0%:99:1E0:41:55:29:26:57 0/0:0:0:0:0:46:0%:85:1E0:43:46:22:24:46 0/0:0:0:0:0:48:0%:89:1E0:43:48:25:23:48 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:46 0/1:40:7:3:4:33:21.21%:22:5.4855E-3:43:26:16:10:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:39:0%:74:1E0:44:39:14:25:40 0/0:0:0:0:0:46:0%:85:1E0:46:46:28:18:46 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:33:0%:63:1E0:40:33:19:14:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:41 0/0:0:0:0:0:55:0%:99:1E0:43:55:33:22:56 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:29 MTB_anc 4179089 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3729_Rv3729|gene3808|transcript|Transcript_gene3808|Coding|1/1|c.805T>C|p.Ser269Pro|805/2331|805/2331|269/776||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4179089T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4179089T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:16:17:34:97.06%:99:1.2301E-18:37:1:1:0:34 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:17:15:33:96.97%:99:4.7095E-18:37:1:1:0:34 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:20:10:10:21:95.24%:99:7.2544E-12:0:0:0:0:22 1/1:45:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:52:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:50:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:55:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:72:37:35:72:100%:99:6.7558E-43:0:0:0:0:73 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:24:13:11:25:96%:99:3.101E-14:0:0:0:0:26 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:53:35:18:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:39:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:36:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:30:20:10:31:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:38:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:57:19:38:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 MTB_anc 4181201 . T C . PASS AC=18;AF=0.060;AN=300;ANN=C|missense_variant|MODERATE|Rv3730c_Rv3730c|gene3809|transcript|Transcript_gene3809|Coding|1/1|c.520A>G|p.Thr174Ala|520/1041|520/1041|174/346||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4181201T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4181201T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:43 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 0/0:0:0:0:0:74:0%:99:1E0:45:74:37:37:74 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:49:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:9:17:26 0/0:0:0:0:0:24:0%:44:1E0:50:24:12:12:24 0/0:0:0:0:0:25:0%:48:1E0:48:25:16:9:25 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:49:0%:93:1E0:43:49:27:22:49 0/0:0:0:0:0:16:0%:29:1E0:48:16:5:11:17 0/0:0:0:0:0:59:0%:99:1E0:44:59:22:37:61 0/0:0:0:0:0:21:0%:40:1E0:41:21:12:9:23 0/0:0:0:0:0:39:0%:74:1E0:48:39:21:18:40 0/0:0:0:0:0:21:0%:40:1E0:43:21:11:10:22 0/0:0:0:0:0:19:0%:37:1E0:44:19:9:10:20 0/0:0:0:0:0:20:0%:36:1E0:46:20:10:10:20 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:24 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:55:0%:99:1E0:46:55:28:27:55 0/0:0:0:0:0:23:0%:44:1E0:45:23:9:14:23 0/0:0:0:0:0:29:0%:55:1E0:49:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:32 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 1/1:50:12:6:6:13:92.31%:58:1.3461E-6:37:1:1:0:13 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:34 0/0:0:0:0:0:27:0%:52:1E0:44:27:15:12:28 0/0:0:0:0:0:21:0%:40:1E0:45:21:11:10:21 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:30 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:34 0/0:0:0:0:0:60:0%:99:1E0:46:60:27:33:61 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:37 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:47 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:37 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:24 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 0/0:0:0:0:0:34:0%:62:1E0:46:34:14:20:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 0/0:0:0:0:0:46:0%:85:1E0:41:46:16:30:47 0/0:0:0:0:0:48:0%:89:1E0:46:48:20:28:48 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:17 0/0:0:0:0:0:28:0%:51:1E0:41:28:22:6:28 0/0:0:0:0:0:19:0%:37:1E0:51:19:7:12:19 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:50:0%:92:1E0:43:50:25:25:51 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:38 0/0:0:0:0:0:42:0%:77:1E0:51:42:24:18:43 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:29 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:33 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:40 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:41:0%:78:1E0:46:41:19:22:41 0/0:0:0:0:0:60:0%:99:1E0:48:60:25:35:62 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:23 0/0:0:0:0:0:37:0%:70:1E0:47:37:20:17:37 0/0:0:0:0:0:13:0%:25:1E0:47:13:5:8:13 0/0:0:0:0:0:16:0%:29:1E0:44:16:7:9:17 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:22 0/0:0:0:0:0:12:0%:21:1E0:45:12:8:4:12 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:46:0%:85:1E0:40:46:18:28:46 0/0:0:0:0:0:30:0%:55:1E0:48:30:18:12:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:34:0%:62:1E0:49:34:14:20:34 0/0:0:0:0:0:40:0%:74:1E0:41:40:13:27:40 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:36 0/0:0:0:0:0:58:0%:99:1E0:44:58:32:26:60 0/0:0:0:0:0:38:0%:70:1E0:42:38:13:25:38 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:19:0%:37:1E0:54:19:6:13:19 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:51:24:11:13:25 0/0:0:0:0:0:54:0%:99:1E0:43:54:26:28:55 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:0:0:0:0:46:0%:85:1E0:45:46:21:25:46 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:33:0%:63:1E0:44:33:22:11:33 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:34 0/0:0:0:0:0:19:0%:37:1E0:41:19:6:13:19 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:44 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:32 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:52:0%:96:1E0:44:52:29:23:53 0/0:0:0:0:0:38:0%:70:1E0:38:38:19:19:39 0/0:39:1:0:1:46:2.17%:73:5E-1:41:45:22:23:47 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:36 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/0:0:0:0:0:61:0%:99:1E0:41:61:33:28:63 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:48 0/0:0:0:0:0:21:0%:40:1E0:40:21:11:10:21 0/0:0:0:0:0:36:0%:66:1E0:44:36:21:15:36 0/0:0:0:0:0:49:0%:93:1E0:40:49:30:19:50 0/0:0:0:0:0:41:0%:78:1E0:43:41:18:23:41 0/0:0:0:0:0:42:0%:77:1E0:42:42:20:22:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:25:14:41 0/0:0:0:0:0:38:0%:70:1E0:44:38:22:16:39 0/0:0:0:0:0:29:0%:55:1E0:42:29:14:15:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:16:21:37 0/0:0:0:0:0:33:0%:63:1E0:40:33:21:12:33 0/0:0:0:0:0:41:0%:78:1E0:41:41:12:29:43 0/0:0:0:0:0:31:0%:59:1E0:47:31:20:11:33 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 0/0:0:0:0:0:31:0%:59:1E0:41:31:18:13:32 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:45:0%:85:1E0:39:45:22:23:45 0/0:0:0:0:0:42:0%:77:1E0:47:42:18:24:42 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:41 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:30 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:44 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:31 0/0:0:0:0:0:22:0%:40:1E0:44:22:7:15:22 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:42:23:19:43:97.67%:99:6.6289E-24:37:1:1:0:44 0/0:0:0:0:0:53:0%:99:1E0:43:53:31:22:53 0/0:0:0:0:0:41:0%:78:1E0:43:41:15:26:44 MTB_anc 4183688 . A G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv3732_Rv3732|gene3811|transcript|Transcript_gene3811|Coding|1/1|c.755A>G|p.His252Arg|755/1059|755/1059|252/352||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4183688A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4183688A>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:46 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:42:0%:77:1E0:42:42:18:24:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:38:1:1:0:24:4.17%:34:5E-1:43:23:9:14:24 0/0:0:0:0:0:29:0%:55:1E0:38:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:51:32:14:18:32 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:49:35:16:19:35 0/0:0:0:0:0:39:0%:74:1E0:48:39:21:18:39 0/0:0:0:0:0:46:0%:85:1E0:45:46:17:29:46 0/0:0:0:0:0:21:0%:40:1E0:52:21:8:13:21 0/0:0:0:0:0:53:0%:99:1E0:45:53:23:30:53 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:47:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:27 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:33 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:25:0%:48:1E0:48:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:29 0/0:0:0:0:0:56:0%:99:1E0:44:56:23:33:56 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:44:38:11:27:39 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:21:0%:40:1E0:48:21:10:11:21 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:19:0%:37:1E0:41:19:11:8:19 0/0:0:0:0:0:35:0%:67:1E0:47:35:21:14:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:12:25:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:17:15:33 0/0:0:0:0:0:40:0%:74:1E0:49:40:20:20:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 0/0:0:0:0:0:34:0%:62:1E0:48:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:16:13:31 0/0:0:0:0:0:46:0%:85:1E0:42:46:19:27:46 0/0:0:0:0:0:58:0%:99:1E0:48:58:27:31:58 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:42 0/0:0:0:0:0:44:0%:81:1E0:44:44:19:25:47 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:41 0/0:0:0:0:0:45:0%:85:1E0:45:45:18:27:45 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:26 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:11:15:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:16:11:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:46:0%:85:1E0:43:46:19:27:47 0/0:0:0:0:0:42:0%:77:1E0:43:42:21:21:42 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:16:0%:29:1E0:46:16:8:8:16 0/0:0:0:0:0:37:0%:70:1E0:43:37:13:24:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:23 0/0:0:0:0:0:29:0%:55:1E0:45:29:11:18:29 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:47:0%:89:1E0:41:47:21:26:47 0/0:0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:35 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:48 0/0:0:0:0:0:46:0%:85:1E0:45:46:17:29:46 0/0:0:0:0:0:33:0%:63:1E0:43:33:12:21:34 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:38 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:47:34:14:20:34 0/0:0:0:0:0:53:0%:99:1E0:45:53:26:27:54 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:45 0/0:0:0:0:0:20:0%:36:1E0:50:20:11:9:21 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:35:0%:67:1E0:46:35:14:21:35 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:21:0%:40:1E0:53:21:7:14:21 0/0:0:0:0:0:37:0%:70:1E0:51:37:8:29:37 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:32:0%:59:1E0:40:32:14:18:32 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:38 0/0:0:0:0:0:43:0%:82:1E0:47:43:25:18:43 0/0:0:0:0:0:40:0%:74:1E0:49:40:13:27:41 0/0:0:0:0:0:18:0%:32:1E0:47:18:11:7:19 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:33 0/0:0:0:0:0:49:0%:93:1E0:45:49:25:24:52 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:30:0%:55:1E0:47:30:17:13:30 0/0:0:0:0:0:22:0%:40:1E0:44:22:11:11:23 0/0:0:0:0:0:36:0%:66:1E0:42:36:15:21:36 0/0:0:0:0:0:31:0%:59:1E0:42:31:11:20:33 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:22 0/0:0:0:0:0:34:0%:62:1E0:51:34:20:14:35 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:25 0/0:0:0:0:0:54:0%:99:1E0:40:54:26:28:56 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:25 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:29 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:43 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:41 0/0:0:0:0:0:39:0%:74:1E0:42:39:23:16:39 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:38 0/0:0:0:0:0:35:0%:67:1E0:39:35:13:22:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:33 0/0:0:0:0:0:29:0%:55:1E0:47:29:13:16:29 0/0:0:0:0:0:31:0%:59:1E0:47:31:11:20:31 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:30 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:26 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:12:23:36 0/0:0:0:0:0:43:0%:82:1E0:45:43:19:24:43 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:36 0/0:0:0:0:0:26:0%:47:1E0:37:26:14:12:26 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:41 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:42 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:35 0/0:0:0:0:0:32:0%:59:1E0:40:32:12:20:32 0/0:0:0:0:0:60:0%:99:1E0:45:60:28:32:64 0/0:0:0:0:0:56:0%:99:1E0:43:56:18:38:58 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:33 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:47 0/0:31:1:1:0:41:2.44%:66:5E-1:39:40:14:26:43 0/0:0:0:0:0:53:0%:99:1E0:41:53:24:29:54 0/0:0:0:0:0:52:0%:96:1E0:39:52:25:27:54 0/0:0:0:0:0:42:0%:77:1E0:42:42:14:28:44 0/0:0:0:0:0:45:0%:85:1E0:40:45:19:26:47 0/0:0:0:0:0:39:0%:74:1E0:40:39:11:28:44 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:43:0%:82:1E0:40:43:20:23:44 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:34 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:39 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:33 0/0:0:0:0:0:42:0%:77:1E0:40:42:16:26:43 0/0:0:0:0:0:79:0%:99:1E0:39:79:32:47:80 0/0:0:0:0:0:34:0%:62:1E0:43:34:10:24:34 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:45 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:37 0/0:0:0:0:0:28:0%:51:1E0:49:28:13:15:28 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:34 0/0:0:0:0:0:23:0%:44:1E0:47:23:9:14:23 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:45 0/0:0:0:0:0:42:0%:77:1E0:43:42:17:25:42 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:36 MTB_anc 4190285 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|stop_gained&splice_region_variant|HIGH|PPE67_Rv3739c|gene3818|transcript|Transcript_gene3818|Coding|1/1|c.233G>A|p.Trp78*|233/234|233/234|78/77||WARNING_TRANSCRIPT_NO_STOP_CODON,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_defect_in_vitro|||n.4190285C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.4190285C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:51:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:52:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:50:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:62:32:30:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:47:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:51:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:50:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:46:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:66:35:31:66:100%:99:2.6498E-39:0:0:0:0:67 1/1:52:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:51:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:63:29:34:63:100%:99:1.657E-37:0:0:0:0:63 1/1:43:62:27:35:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:47:16:31:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:35 MTB_anc 4190532 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|PPE67_Rv3739c-Rv3740c_Rv3740c|gene3818-gene3819|intergenic_region|gene3818-gene3819|||n.4190532C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:71:36:35:71:100%:99:2.6835E-42:0:0:0:0:72 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:50:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:56:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:45:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:51:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:49:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:48:17:31:48:100%:99:1.554E-28:0:0:0:0:50 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:68:31:37:68:100%:99:1.6809E-40:0:0:0:0:70 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:22 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:27 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:46:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:53 1/1:40:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:37:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:38:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:60:32:28:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:49:21:28:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 4193877 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|synonymous_variant|LOW|ctpJ_Rv3743c|gene3822|transcript|Transcript_gene3822|Coding|1/1|c.1497C>T|p.Asp499Asp|1497/1983|1497/1983|499/660||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4193877G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4193877G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:31:0%:59:1E0:37:31:12:19:36 0/0:0:0:0:0:13:0%:25:1E0:35:13:6:7:16 0/0:0:0:0:0:52:0%:96:1E0:36:52:18:34:56 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:20 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:18 0/0:0:0:0:0:13:0%:25:1E0:39:13:2:11:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:32 0/0:0:0:0:0:18:0%:32:1E0:37:18:4:14:23 0/0:0:0:0:0:14:0%:25:1E0:37:14:4:10:15 0/0:0:0:0:0:26:0%:47:1E0:37:26:10:16:28 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:21 0/0:35:1:0:1:37:2.7%:59:5E-1:35:36:18:18:41 0/0:0:0:0:0:10:0%:17:1E0:38:10:3:7:12 0/0:0:0:0:0:35:0%:67:1E0:38:35:12:23:46 0/0:0:0:0:0:16:0%:29:1E0:38:16:7:9:20 0/0:0:0:0:0:30:0%:55:1E0:37:30:6:24:39 0/0:0:0:0:0:19:0%:37:1E0:37:19:6:13:21 0/0:0:0:0:0:16:0%:29:1E0:38:16:4:12:16 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:16 0/0:0:0:0:0:25:0%:48:1E0:38:25:12:13:28 0/0:0:0:0:0:19:0%:37:1E0:35:19:7:12:24 0/0:0:0:0:0:38:0%:70:1E0:35:38:17:21:46 0/0:0:0:0:0:15:0%:29:1E0:36:15:3:12:17 0/0:0:0:0:0:26:0%:47:1E0:36:26:11:15:32 0/0:0:0:0:0:31:0%:59:1E0:37:31:14:17:32 0/0:0:0:0:0:18:0%:32:1E0:40:18:5:13:24 0/0:0:0:0:0:17:0%:33:1E0:34:17:12:5:18 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:22 0/0:0:0:0:0:20:0%:36:1E0:39:20:9:11:26 0/0:0:0:0:0:18:0%:32:1E0:37:18:8:10:21 0/0:0:0:0:0:33:0%:63:1E0:37:33:22:11:38 0/0:0:0:0:0:29:0%:55:1E0:37:29:9:20:32 0/0:0:0:0:0:16:0%:29:1E0:36:16:8:8:17 0/0:0:0:0:0:14:0%:25:1E0:39:14:6:8:17 0/0:0:0:0:0:22:0%:40:1E0:36:22:9:13:23 0/0:0:0:0:0:27:0%:52:1E0:35:27:13:14:32 0/0:0:0:0:0:25:0%:48:1E0:38:25:11:14:27 0/0:0:0:0:0:38:0%:70:1E0:35:38:12:26:43 0/0:0:0:0:0:29:0%:55:1E0:36:29:9:20:35 0/0:0:0:0:0:27:0%:52:1E0:37:27:9:18:27 0/0:0:0:0:0:31:0%:59:1E0:34:31:17:14:37 0/0:0:0:0:0:41:0%:78:1E0:37:41:15:26:48 0/0:0:0:0:0:14:0%:25:1E0:35:14:7:7:18 0/0:0:0:0:0:24:0%:44:1E0:37:24:9:15:30 0/0:0:0:0:0:29:0%:55:1E0:37:29:10:19:30 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:35 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:29 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:28 0/0:0:0:0:0:36:0%:66:1E0:35:36:15:21:41 0/0:0:0:0:0:29:0%:55:1E0:36:29:13:16:31 0/0:0:0:0:0:7:0%:14:1E0:44:7:4:3:10 0/0:0:0:0:0:26:0%:47:1E0:35:26:10:16:29 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:18 0/0:0:0:0:0:27:0%:52:1E0:38:27:9:18:30 0/0:0:0:0:0:18:0%:32:1E0:37:18:10:8:23 0/0:0:0:0:0:36:0%:66:1E0:37:36:16:20:45 0/0:0:0:0:0:36:0%:66:1E0:35:36:13:23:45 0/0:0:0:0:0:12:0%:21:1E0:38:12:5:7:16 0/0:0:0:0:0:32:0%:59:1E0:37:32:17:15:37 0/0:0:0:0:0:21:0%:40:1E0:38:21:7:14:23 0/0:0:0:0:0:21:0%:40:1E0:37:21:7:14:24 0/0:0:0:0:0:30:0%:55:1E0:35:30:14:16:32 0/0:0:0:0:0:26:0%:47:1E0:36:26:12:14:31 0/0:0:0:0:0:19:0%:37:1E0:37:19:8:11:24 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:35 0/0:0:0:0:0:30:0%:55:1E0:34:30:16:14:36 0/0:0:0:0:0:15:0%:29:1E0:37:15:6:9:21 0/0:0:0:0:0:23:0%:44:1E0:38:23:6:17:26 0/0:0:0:0:0:10:0%:17:1E0:36:10:3:7:11 0/0:0:0:0:0:24:0%:44:1E0:38:24:10:14:27 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:11:12:31 0/0:0:0:0:0:16:0%:29:1E0:38:16:4:12:19 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:32 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:28 0/0:0:0:0:0:19:0%:37:1E0:35:19:6:13:22 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:21 0/0:0:0:0:0:17:0%:33:1E0:39:17:7:10:22 0/0:0:0:0:0:29:0%:55:1E0:34:29:12:17:33 0/0:0:0:0:0:29:0%:55:1E0:36:29:15:14:35 0/0:0:0:0:0:29:0%:55:1E0:36:29:12:17:33 0/0:0:0:0:0:32:0%:59:1E0:35:32:13:19:40 0/0:0:0:0:0:30:0%:55:1E0:36:30:13:17:35 0/0:0:0:0:0:23:0%:44:1E0:37:23:7:16:26 0/0:0:0:0:0:22:0%:40:1E0:36:22:8:14:23 0/0:34:1:0:1:21:4.76%:31:5E-1:37:20:3:17:25 0/0:0:0:0:0:17:0%:33:1E0:35:17:7:10:23 0/0:0:0:0:0:17:0%:33:1E0:37:17:6:11:20 0/0:0:0:0:0:27:0%:52:1E0:37:27:14:13:29 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:29 1/1:36:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:33 0/0:0:0:0:0:15:0%:29:1E0:37:15:9:6:22 0/0:0:0:0:0:36:0%:66:1E0:36:36:17:19:42 0/0:0:0:0:0:16:0%:29:1E0:38:16:5:11:23 0/0:0:0:0:0:32:0%:59:1E0:36:32:12:20:40 0/0:0:0:0:0:23:0%:44:1E0:37:23:9:14:25 0/0:0:0:0:0:10:0%:17:1E0:36:10:6:4:13 0/0:0:0:0:0:18:0%:32:1E0:35:18:11:7:23 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:24 0/0:0:0:0:0:17:0%:33:1E0:39:17:8:9:23 0/0:0:0:0:0:15:0%:29:1E0:37:15:3:12:18 0/0:0:0:0:0:18:0%:32:1E0:37:18:6:12:22 0/0:0:0:0:0:34:0%:62:1E0:35:34:18:16:35 0/0:0:0:0:0:23:0%:44:1E0:36:23:8:15:24 0/0:0:0:0:0:16:0%:29:1E0:34:16:4:12:18 0/0:0:0:0:0:21:0%:40:1E0:37:21:9:12:26 0/0:0:0:0:0:17:0%:33:1E0:38:17:13:4:17 0/0:0:0:0:0:34:0%:62:1E0:37:34:13:21:37 0/0:0:0:0:0:28:0%:51:1E0:39:28:6:22:31 0/0:0:0:0:0:24:0%:44:1E0:35:24:12:12:28 0/0:0:0:0:0:26:0%:47:1E0:36:26:8:18:32 0/0:0:0:0:0:22:0%:40:1E0:38:22:4:18:25 0/0:0:0:0:0:12:0%:21:1E0:35:12:3:9:15 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:27 0/0:0:0:0:0:18:0%:32:1E0:35:18:8:10:23 0/0:0:0:0:0:20:0%:36:1E0:35:20:9:11:24 0/0:0:0:0:0:16:0%:29:1E0:35:16:5:11:19 0/0:0:0:0:0:16:0%:29:1E0:35:16:7:9:16 0/0:0:0:0:0:12:0%:21:1E0:37:12:2:10:13 0/0:0:0:0:0:39:0%:74:1E0:36:39:17:22:46 0/0:0:0:0:0:29:0%:55:1E0:33:29:14:15:31 0/0:0:0:0:0:20:0%:36:1E0:36:20:8:12:23 0/0:0:0:0:0:19:0%:37:1E0:35:19:10:9:23 0/0:0:0:0:0:39:0%:74:1E0:36:39:10:29:41 0/0:0:0:0:0:20:0%:36:1E0:38:20:5:15:23 0/0:0:0:0:0:26:0%:47:1E0:35:26:5:21:29 0/0:0:0:0:0:18:0%:32:1E0:35:18:4:14:20 0/0:0:0:0:0:27:0%:52:1E0:34:27:11:16:30 0/0:0:0:0:0:19:0%:37:1E0:35:19:11:8:22 0/0:0:0:0:0:28:0%:51:1E0:36:28:8:20:31 0/0:0:0:0:0:15:0%:29:1E0:35:15:4:11:17 0/0:0:0:0:0:21:0%:40:1E0:35:21:8:13:22 0/0:0:0:0:0:18:0%:32:1E0:36:18:5:13:22 0/0:0:0:0:0:27:0%:52:1E0:35:27:6:21:29 0/0:0:0:0:0:16:0%:29:1E0:36:16:4:12:18 0/0:0:0:0:0:16:0%:29:1E0:34:16:7:9:18 0/0:0:0:0:0:28:0%:51:1E0:36:28:8:20:33 0/0:0:0:0:0:22:0%:40:1E0:36:22:7:15:24 0/0:0:0:0:0:13:0%:25:1E0:37:13:3:10:16 0/0:0:0:0:0:25:0%:48:1E0:35:25:6:19:26 0/0:0:0:0:0:31:0%:59:1E0:37:31:16:15:34 0/0:0:0:0:0:21:0%:40:1E0:35:21:5:16:26 0/0:0:0:0:0:27:0%:52:1E0:35:27:14:13:34 0/0:0:0:0:0:30:0%:55:1E0:37:30:18:12:35 0/0:0:0:0:0:21:0%:40:1E0:35:21:10:11:25 0/0:0:0:0:0:23:0%:44:1E0:35:23:11:12:25 0/0:0:0:0:0:22:0%:40:1E0:37:22:16:6:30 0/0:0:0:0:0:40:0%:74:1E0:35:40:14:26:46 0/0:0:0:0:0:31:0%:59:1E0:36:31:7:24:36 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:17 MTB_anc 4197137 . G GC . PASS AC=299;AF=0.997;AN=300;ANN=GC|intergenic_region|MODIFIER|Rv3747_Rv3747-Rv3748_Rv3748|gene3826-gene3827|intergenic_region|gene3826-gene3827|||n.4197137_4197138insC||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:57:23:34:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:29:16:13:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:31:16:15:31:96.88%:99:1.8007E-17:34:1:1:0:32 1/1:52:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:46:23:23:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:19:27:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:21:8:13:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:26:14:12:25:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:45:32:18:14:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 0/1:45:22:13:9:23:88%:99:2.9149E-12:50:1:0:1:24 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:57:31:26:53:100%:99:6.4572E-34:0:0:0:0:57 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:18:17:35:97.22%:99:8.3613E-20:37:1:1:0:36 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:21:8:13:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:28:14:14:28:96.55%:99:9.9776E-16:35:1:0:1:29 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:13:12:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:44:27:12:15:29:93.1%:99:3.7915E-15:34:1:1:0:29 1/1:40:26:8:18:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:45:39:20:19:39:97.5%:99:3.6742E-23:0:0:0:0:39 1/1:41:28:12:16:28:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:26:8:18:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:30:11:19:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:29:13:16:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:48:29:15:14:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:46:23:23:44:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:13:22:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:18:7:11:19:90%:92:5.6585E-10:37:1:1:0:20 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:44:22:22:44:97.78%:99:3.8097E-26:0:0:0:0:45 1/1:44:31:13:18:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:25:8:17:26:96.15%:99:5.4444E-14:29:1:0:1:26 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:38:14:24:39:95%:99:1.4697E-21:34:1:1:0:39 1/1:41:25:14:11:26:96.15%:99:5.4444E-14:60:1:1:0:26 1/1:46:36:18:18:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:42:18:24:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:23:7:16:23:95.83%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:14:18:30:96.97%:99:4.7095E-18:32:1:0:1:33 1/1:46:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:22:13:9:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:13:7:6:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:34:11:23:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:51:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:34:22:12:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:30:13:17:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:44:24:20:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:35:15:20:35:97.22%:99:8.9137E-21:0:0:0:0:35 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:28:14:14:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:43:23:20:43:97.73%:99:1.7144E-24:35:1:1:0:44 1/1:45:24:13:11:24:96%:99:2.0568E-13:60:1:1:0:25 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:51:28:11:17:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:18:20:39:95%:99:1.4508E-22:0:0:0:0:40 1/1:44:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:34:18:16:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:33:15:18:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:29:18:11:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:32:14:18:33:96.97%:99:4.7095E-18:32:1:0:1:33 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:44:20:24:43:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:12:14:26:96.3%:99:1.4382E-14:46:1:1:0:27 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:20:8:12:21:95.24%:99:4.0873E-11:34:1:0:1:21 1/1:39:23:11:12:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:42:14:28:41:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:38:21:17:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:30:14:16:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:67:35:32:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:38:47:22:25:43:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:19:13:6:20:95%:98:1.5234E-10:37:1:1:0:20 1/1:41:23:10:13:21:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:43:17:26:41:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:42:21:21:41:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:57:22:35:54:100%:99:6.4572E-34:0:0:0:0:57 1/1:39:43:21:22:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:37:42:15:27:39:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:37:22:15:36:100%:99:5.7269E-22:0:0:0:0:37 1/1:36:32:20:12:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:29:18:11:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:33:15:18:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:19:12:34:91.18%:99:2.1486E-18:0:0:0:0:34 1/1:38:50:22:28:49:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:37:16:21:36:97.37%:99:5.6582E-21:36:1:1:0:38 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:46:23:23:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:24:12:12:23:100%:99:3.101E-14:0:0:0:0:24 1/1:38:28:13:15:28:96.55%:99:9.9776E-16:74:1:1:0:29 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:40:20:20:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 4197189 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv3747_Rv3747-Rv3748_Rv3748|gene3826-gene3827|intergenic_region|gene3826-gene3827|||n.4197189G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:50:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:50:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:40:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:14:14:29:96.55%:99:9.9776E-16:60:1:1:0:30 1/1:41:67:33:34:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:55:21:34:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:44:21:23:45:97.78%:99:4.4304E-25:32:1:1:0:48 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 4198611 . CG C . PASS AC=295;AF=0.983;AN=300;ANN=C|intergenic_region|MODIFIER|Rv3750c_Rv3750c-serX_Rvnt42|gene3829-gene3830|intergenic_region|gene3829-gene3830|||n.4198612delG||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:26:22:49:97.96%:99:1.9625E-27:34:1:1:0:49 1/1:52:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:33:17:16:32:97.06%:99:1.2301E-18:38:1:1:0:34 1/1:44:39:22:17:40:97.5%:99:3.8137E-22:35:1:1:0:40 1/1:45:25:14:11:25:96.15%:99:5.4444E-14:34:1:1:0:26 1/1:50:30:15:15:31:93.75%:99:3.0612E-16:34:2:0:2:32 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:38:24:14:39:97.44%:99:1.4697E-21:38:1:0:1:39 1/1:47:31:20:11:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:45:21:24:47:95.74%:99:7.2338E-25:35:2:2:0:47 1/1:42:22:13:9:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:35:23:12:36:94.59%:99:4.2437E-19:33:2:1:1:37 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:18:10:8:19:90%:87:1.6758E-9:31:2:2:0:20 1/1:43:35:18:17:36:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:43:44:25:19:45:97.78%:99:4.4304E-25:33:1:1:0:45 1/1:44:33:13:20:35:94.29%:99:5.9366E-18:33:2:0:2:35 1/1:47:36:18:18:37:97.3%:99:2.1762E-20:33:1:0:1:37 1/1:42:35:19:16:36:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:49:13:6:7:14:92.86%:64:3.7391E-7:60:1:0:1:14 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:18:9:9:19:94.74%:92:5.6585E-10:34:1:1:0:19 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:30:17:13:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:37:23:14:38:97.37%:99:5.6582E-21:35:1:1:0:38 0/1:49:29:15:14:33:87.88%:99:9.1482E-15:40:4:2:2:33 1/1:40:30:13:17:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:28:12:16:30:93.33%:99:4.194E-15:34:2:1:1:30 1/1:45:42:23:19:44:95.45%:99:3.9431E-23:34:2:0:2:44 1/1:44:36:15:21:37:94.74%:99:1.1316E-19:29:2:1:1:38 1/1:48:53:27:26:54:98.15%:99:2.2126E-30:60:1:1:0:54 1/1:46:41:26:15:42:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:45:44:21:23:46:95.65%:99:2.7459E-24:33:2:1:1:46 1/1:41:34:15:19:35:97.14%:99:3.2089E-19:33:1:0:1:35 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 0/1:43:21:9:12:24:87.5%:99:9.0704E-11:33:3:2:1:24 0/1:45:25:10:15:28:89.29%:99:5.8768E-13:44:3:3:0:28 1/1:40:30:13:17:32:93.75%:99:3.0612E-16:34:2:0:2:32 1/1:46:27:14:13:28:96.43%:99:3.7915E-15:33:1:1:0:28 1/1:46:34:12:22:35:97.14%:99:3.2089E-19:35:1:1:0:35 1/1:41:39:19:20:38:97.5%:99:3.8137E-22:35:1:0:1:40 1/1:42:46:26:20:48:95.83%:99:1.9036E-25:34:2:0:2:48 1/1:45:32:16:16:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:49:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:50:25:25:49:100%:99:9.9117E-30:0:0:0:0:50 0/1:53:17:10:7:19:89.47%:82:5.9414E-9:46:2:0:2:19 1/1:48:29:14:15:31:93.55%:99:1.1344E-15:35:2:2:0:31 1/1:45:29:16:13:30:96.67%:99:2.6212E-16:31:1:1:0:30 1/1:41:40:22:18:40:95.24%:99:5.6346E-22:35:2:1:1:42 1/1:44:39:20:19:38:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:23:9:14:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:41:22:19:42:97.62%:99:2.5612E-23:33:1:0:1:42 1/1:49:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:43:19:24:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:18:14:33:94.12%:99:2.2142E-17:60:2:1:1:34 1/1:46:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:50:23:27:50:98.04%:99:9.9117E-30:0:0:0:0:50 1/1:42:29:13:16:30:96.67%:99:2.6212E-16:60:1:0:1:30 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:28:13:15:30:93.33%:99:4.194E-15:46:2:1:1:30 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:22:8:14:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:38:19:19:40:95%:99:8.0088E-21:32:2:1:1:40 1/1:41:37:19:18:38:97.37%:99:5.6582E-21:36:1:1:0:38 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 0/1:48:26:12:14:29:89.66%:99:1.6496E-13:34:3:2:1:29 1/1:44:36:20:16:37:97.3%:99:2.1762E-20:31:1:1:0:37 1/1:45:31:20:11:31:96.88%:99:1.8007E-17:35:1:0:1:32 1/1:45:29:18:11:30:96.67%:99:2.6212E-16:37:1:1:0:30 1/1:47:42:22:20:43:97.67%:99:6.6289E-24:37:1:1:0:43 1/1:43:26:16:10:28:92.86%:99:5.6872E-14:49:2:2:0:28 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:29:13:16:30:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:44:32:23:9:33:96.97%:99:4.7095E-18:30:1:1:0:33 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:24:11:13:25:96%:99:2.0568E-13:35:1:0:1:25 1/1:45:35:22:13:36:97.22%:99:8.3613E-20:34:1:0:1:36 1/1:48:35:23:12:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:45:41:18:23:41:97.62%:99:2.5612E-23:35:1:0:1:42 1/1:50:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:31:14:17:31:96.88%:99:1.8007E-17:31:1:1:0:32 1/1:45:61:28:33:62:98.39%:99:4.1425E-35:32:1:0:1:62 1/1:45:29:10:19:28:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:17:15:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:20:16:37:97.3%:99:2.1762E-20:60:1:1:0:37 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:44:24:20:40:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:22:11:11:21:95.65%:99:2.9149E-12:33:1:0:1:23 1/1:39:26:15:11:24:96.3%:99:1.4382E-14:32:1:1:0:27 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:44:25:19:45:97.78%:99:4.4304E-25:38:1:1:0:45 1/1:42:33:16:17:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:20:11:9:21:95.24%:99:4.0873E-11:35:1:1:0:21 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:16:22:37:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:19:21:40:97.56%:99:9.8874E-23:38:1:1:0:41 1/1:38:49:21:28:48:96.08%:99:3.4484E-27:32:2:1:1:51 1/1:39:58:31:27:58:96.67%:99:1.9573E-32:33:2:2:0:60 1/1:40:37:19:18:36:97.37%:99:5.6582E-21:30:1:1:0:38 1/1:47:36:18:18:37:97.3%:99:2.1762E-20:32:1:1:0:37 1/1:40:34:17:17:33:97.14%:99:3.2089E-19:33:1:1:0:36 1/1:43:51:27:24:54:94.44%:99:1.1771E-27:33:3:0:3:54 1/1:40:54:27:27:56:96.43%:99:4.2321E-30:33:2:0:2:56 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:36:17:19:32:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:54:29:25:53:98.18%:99:5.6837E-31:27:1:1:0:56 1/1:41:40:17:23:40:95.24%:99:5.6346E-22:31:2:1:1:42 1/1:38:51:31:20:50:98.08%:99:3.3479E-29:33:1:0:1:52 1/1:40:44:24:20:45:93.62%:99:1.2056E-23:36:3:2:1:47 1/1:41:52:24:28:54:92.86%:99:1.2485E-27:34:4:3:1:56 1/1:40:41:17:24:39:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:44:20:24:43:97.78%:99:4.4304E-25:33:1:1:0:45 1/1:38:34:13:21:36:94.44%:99:1.5887E-18:32:2:1:1:36 1/1:39:55:23:32:54:98.21%:99:1.4593E-31:32:1:0:1:56 1/1:39:39:20:19:43:90.7%:99:2.6872E-20:31:4:2:2:43 1/1:38:41:21:20:39:97.62%:99:2.5612E-23:34:1:0:1:42 1/1:39:27:14:13:28:93.1%:99:1.5465E-14:33:2:2:0:29 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:61:35:26:61:98.39%:99:4.1425E-35:37:1:1:0:63 1/1:41:48:23:25:49:96%:99:1.3143E-26:33:2:2:0:50 1/1:40:36:18:18:37:92.31%:99:4.2179E-19:35:3:2:1:39 1/1:40:48:23:25:51:94.12%:99:6.2071E-26:33:3:2:1:51 1/1:43:49:25:24:50:98%:99:5.0549E-28:34:1:1:0:50 1/1:48:34:20:14:35:97.14%:99:3.2089E-19:34:1:1:0:35 1/1:41:32:17:15:31:96.97%:99:4.7095E-18:29:1:1:0:33 1/1:46:38:14:24:39:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:41:37:16:21:38:97.37%:99:5.6582E-21:37:1:1:0:38 1/1:43:26:16:10:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:52:28:24:53:96.3%:99:6.1952E-29:36:2:1:1:54 1/1:40:58:25:33:59:96.67%:99:1.9573E-32:34:2:1:1:60 1/1:42:29:18:11:30:96.67%:99:2.6212E-16:33:1:0:1:30 MTB_anc 4200220 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3753c_Rv3753c|gene3832|transcript|Transcript_gene3832|Coding|1/1|c.2C>T|p.Thr1Met|2/501|2/501|1/166||WARNING_TRANSCRIPT_NO_START_CODON,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4200220G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4200220G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:72:36:36:72:100%:99:6.7558E-43:0:0:0:0:72 1/1:46:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:44:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:38:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 4202383 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|proZ_Rv3756c|gene3835|transcript|Transcript_gene3835|Coding|1/1|c.231G>T|p.Val77Val|231/720|231/720|77/239||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4202383C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|virulence__detoxification__adaptation|||n.4202383C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:48:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:49:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:52:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:53:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:48:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:37:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:31:17:14:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 4207345 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv3762c_Rv3762c|gene3841|transcript|Transcript_gene3841|Coding|1/1|c.1532C>A|p.Thr511Lys|1532/1881|1532/1881|511/626||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4207345G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4207345G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:39:47:16:31:47 0/0:0:0:0:0:17:0%:33:1E0:49:17:9:8:17 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:14:0%:25:1E0:44:14:6:8:14 0/0:0:0:0:0:25:0%:48:1E0:41:25:10:15:25 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:28 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:22:0%:40:1E0:42:22:10:12:23 0/0:0:0:0:0:49:0%:93:1E0:39:49:17:32:51 0/0:0:0:0:0:17:0%:33:1E0:43:17:7:10:17 0/0:0:0:0:0:65:0%:99:1E0:41:65:23:42:66 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:26 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:29 0/0:0:0:0:0:18:0%:32:1E0:41:18:6:12:18 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:24:0%:44:1E0:38:24:8:16:24 0/0:0:0:0:0:43:0%:82:1E0:42:43:7:36:44 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:35 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:38 0/0:0:0:0:0:34:0%:62:1E0:42:34:10:24:34 0/0:0:0:0:0:16:0%:29:1E0:41:16:8:8:17 0/0:0:0:0:0:24:0%:44:1E0:41:24:11:13:25 0/0:0:0:0:0:17:0%:33:1E0:41:17:6:11:17 0/0:0:0:0:0:23:0%:44:1E0:39:23:5:18:23 0/0:0:0:0:0:37:0%:70:1E0:42:37:12:25:37 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:30 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:29 0/0:34:1:1:0:37:2.7%:59:5E-1:41:36:13:23:37 0/0:0:0:0:0:56:0%:99:1E0:42:56:24:32:56 0/0:0:0:0:0:46:0%:85:1E0:46:46:18:28:46 0/0:0:0:0:0:43:0%:82:1E0:44:43:20:23:43 0/0:0:0:0:0:51:0%:97:1E0:43:51:17:34:51 0/0:0:0:0:0:29:0%:55:1E0:43:29:11:18:29 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:14:0%:25:1E0:42:14:6:8:15 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:16:21:37 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:36 0/0:0:0:0:0:30:0%:55:1E0:43:30:12:18:30 0/0:0:0:0:0:53:0%:99:1E0:42:53:20:33:54 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:51 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:39:0%:74:1E0:40:39:12:27:39 0/0:0:0:0:0:14:0%:25:1E0:42:14:6:8:14 0/0:0:0:0:0:22:0%:40:1E0:40:22:6:16:22 0/0:0:0:0:0:27:0%:52:1E0:42:27:11:16:27 0/0:0:0:0:0:50:0%:93:1E0:40:49:13:36:50 0/0:0:0:0:0:48:0%:89:1E0:41:48:22:26:48 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:20 0/0:0:0:0:0:41:0%:78:1E0:39:41:15:26:41 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:15:24:39 0/0:0:0:0:0:48:0%:89:1E0:38:48:16:32:48 0/0:0:0:0:0:34:0%:62:1E0:40:34:13:21:34 0/0:0:0:0:0:35:0%:67:1E0:44:35:10:25:35 0/0:0:0:0:0:52:0%:96:1E0:42:52:21:31:52 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:11:28:39 0/0:0:0:0:0:18:0%:32:1E0:43:18:4:14:18 0/0:0:0:0:0:25:0%:48:1E0:40:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:8:20:28 0/0:0:0:0:0:50:0%:92:1E0:40:50:21:29:50 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:45:30:11:19:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:7:21:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:29:0%:55:1E0:41:29:11:18:29 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:37 0/0:0:0:0:0:18:0%:32:1E0:43:18:7:11:18 0/0:0:0:0:0:24:0%:44:1E0:41:24:10:14:25 0/0:0:0:0:0:33:0%:63:1E0:40:33:12:21:33 0/0:0:0:0:0:23:0%:44:1E0:40:23:11:12:23 0/0:0:0:0:0:14:0%:25:1E0:43:14:7:7:14 0/0:0:0:0:0:22:0%:40:1E0:45:22:8:14:22 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:25 0/0:0:0:0:0:30:0%:55:1E0:45:30:9:21:30 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:32:0%:59:1E0:37:32:9:23:32 0/0:0:0:0:0:49:0%:93:1E0:40:49:22:27:49 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:28 0/0:0:0:0:0:21:0%:40:1E0:40:21:10:11:21 0/0:0:0:0:0:33:0%:63:1E0:41:33:9:24:33 0/0:0:0:0:0:24:0%:44:1E0:42:24:7:17:24 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:38:0%:70:1E0:39:38:13:25:38 0/0:0:0:0:0:35:0%:67:1E0:40:35:12:23:36 0/0:0:0:0:0:22:0%:40:1E0:39:22:9:13:24 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:22:0%:40:1E0:40:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:31:0%:59:1E0:45:31:12:19:31 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:32 0/0:38:1:1:0:35:2.86%:55:5E-1:42:34:20:14:35 0/0:39:1:0:1:39:2.56%:62:5E-1:41:38:15:23:39 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:38:31:11:20:32 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:40 0/0:0:0:0:0:47:0%:89:1E0:38:47:20:27:48 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:41 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:40 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:18:0%:32:1E0:40:18:11:7:18 0/0:0:0:0:0:52:0%:96:1E0:39:52:13:39:52 0/0:0:0:0:0:41:0%:78:1E0:41:41:15:26:41 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:36 0/0:0:0:0:0:58:0%:99:1E0:39:58:22:36:58 0/0:0:0:0:0:38:0%:70:1E0:39:38:11:27:40 0/0:0:0:0:0:62:0%:99:1E0:40:62:28:34:62 0/0:0:0:0:0:42:0%:77:1E0:38:42:16:26:43 0/0:0:0:0:0:36:0%:66:1E0:39:36:12:24:37 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:32 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:39:0%:74:1E0:38:39:15:24:39 0/0:0:0:0:0:47:0%:89:1E0:41:47:16:31:48 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:36 0/0:0:0:0:0:41:0%:78:1E0:38:41:18:23:41 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:58:0%:99:1E0:38:58:18:40:58 0/0:0:0:0:0:54:0%:99:1E0:40:54:24:30:54 0/0:0:0:0:0:39:0%:74:1E0:40:39:16:23:39 0/0:0:0:0:0:50:0%:92:1E0:38:50:24:26:50 0/0:0:0:0:0:37:0%:70:1E0:39:37:21:16:37 0/0:0:0:0:0:24:0%:44:1E0:43:24:8:16:24 0/0:0:0:0:0:21:0%:40:1E0:41:21:4:17:21 0/0:0:0:0:0:34:0%:62:1E0:40:34:12:22:34 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:18:0%:32:1E0:42:18:5:13:18 0/0:0:0:0:0:26:0%:47:1E0:39:26:12:14:26 0/0:0:0:0:0:41:0%:78:1E0:41:41:9:32:42 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:34 MTB_anc 4210876 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|tcrY_Rv3764c|gene3843|transcript|Transcript_gene3843|Coding|1/1|c.134G>A|p.Arg45His|134/1428|134/1428|45/475||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4210876C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.4210876C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:54:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:55:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:56:20:36:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:37:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:37 1/1:39:54:21:33:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 4215484 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv3770c_Rv3770c|gene3849|transcript|Transcript_gene3849|Coding|1/1|c.292G>C|p.Ala98Pro|292/576|292/576|98/191||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4215484C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4215484C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:52:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:48:16:32:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:37:20:17:38:97.37%:99:5.6582E-21:39:1:1:0:41 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:44:29:13:16:30:96.67%:99:2.6212E-16:38:1:0:1:31 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:43:24:19:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:49:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:46:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:48:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:45:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:46:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:48:23:25:49:100%:99:1.554E-28:0:0:0:0:50 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:51:24:27:52:98.08%:99:2.5024E-30:0:0:0:0:55 1/1:47:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:48:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:38:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:34:19:15:35:97.14%:99:3.5146E-20:0:0:0:0:36 1/1:38:56:26:30:57:98.25%:99:2.5602E-33:0:0:0:0:57 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:35:18:17:36:97.22%:99:8.9137E-21:0:0:0:0:38 1/1:41:42:21:21:43:97.67%:99:5.9562E-25:0:0:0:0:44 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 4216255 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4216255G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.4216255G>C||||||,C|intergenic_region|MODIFIER|Rv3770c_Rv3770c-Rv3771c_Rv3771c|gene3849-gene3850|intergenic_region|gene3849-gene3850|||n.4216255G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:51:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:39:27:12:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:41:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:47:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:42:26:16:43:97.67%:99:6.6289E-24:37:1:1:0:44 1/1:46:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:33:19:14:34:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:39:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:61:35:26:61:100%:99:2.609E-36:0:0:0:0:62 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:37:21:16:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:51:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:37:19:18:38:97.37%:99:5.6582E-21:60:1:1:0:38 1/1:43:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:51 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:37:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 MTB_anc 4217557 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|hisC2_Rv3772|gene3853|transcript|Transcript_gene3853|Coding|1/1|c.424G>A|p.Ala142Thr|424/1062|424/1062|142/353||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4217557G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4217557G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:50:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:60:22:38:60:100%:99:1.035E-35:0:0:0:0:60 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:45:61:26:35:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:67:31:36:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:64:16:48:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:37:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:53:15:38:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:37 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 4218303 . G A . PASS AC=16;AF=0.053;AN=300;ANN=A|missense_variant|MODERATE|Rv3773c_Rv3773c|gene3854|transcript|Transcript_gene3854|Coding|1/1|c.523C>T|p.Pro175Ser|523/585|523/585|175/194||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4218303G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4218303G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:44:45:23:22:46 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:0:0:0:0:47:0%:89:1E0:48:47:24:23:47 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:27 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:40 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:13:0%:25:1E0:48:13:7:6:14 0/0:0:0:0:0:23:0%:44:1E0:52:23:8:15:23 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:42:0%:77:1E0:49:42:22:20:42 0/0:0:0:0:0:48:0%:89:1E0:42:48:24:24:48 0/0:0:0:0:0:14:0%:25:1E0:51:14:4:10:15 0/0:0:0:0:0:57:0%:99:1E0:43:57:30:27:59 0/0:0:0:0:0:29:0%:55:1E0:40:29:12:17:30 0/0:0:0:0:0:22:0%:40:1E0:46:22:11:11:23 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:30 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:25:0%:48:1E0:45:25:10:15:25 0/0:0:0:0:0:25:0%:48:1E0:50:25:14:11:25 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:31 0/0:0:0:0:0:22:0%:40:1E0:48:22:11:11:24 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:25 0/0:0:0:0:0:27:0%:52:1E0:43:27:10:17:27 0/0:0:0:0:0:27:0%:52:1E0:48:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:60:1:1:0:30:3.33%:44:5E-1:48:29:14:15:30 0/0:0:0:0:0:41:0%:78:1E0:46:41:16:25:43 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:38:1:1:0:58:1.72%:94:5E-1:48:57:27:30:59 0/0:0:0:0:0:43:0%:82:1E0:46:43:21:22:44 0/0:0:0:0:0:54:0%:99:1E0:45:54:23:31:54 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:33 0/0:0:0:0:0:45:0%:85:1E0:43:45:24:21:45 0/0:0:0:0:0:21:0%:40:1E0:40:21:5:16:21 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:23 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:37:0%:70:1E0:46:37:16:21:38 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:23 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:31 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:43 0/0:0:0:0:0:35:0%:67:1E0:46:35:20:15:35 0/0:0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:34 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:34 0/0:0:0:0:0:24:0%:44:1E0:40:24:8:16:24 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:39:0%:74:1E0:45:39:26:13:39 0/0:0:0:0:0:23:0%:44:1E0:39:23:15:8:23 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:35:0%:67:1E0:50:35:13:22:35 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:16:22:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:39 0/0:0:0:0:0:19:0%:37:1E0:50:19:10:9:20 0/0:0:0:0:0:38:0%:70:1E0:47:38:14:24:38 0/0:0:0:0:0:51:0%:97:1E0:45:51:24:27:51 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:36:0%:66:1E0:45:36:20:16:37 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:25 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:15 0/0:0:0:0:0:33:0%:63:1E0:48:33:13:20:35 0/0:0:0:0:0:18:0%:32:1E0:50:18:10:8:18 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:39:0%:74:1E0:43:39:21:18:40 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:14:22:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:26:0%:47:1E0:46:26:11:15:26 0/0:0:0:0:0:23:0%:44:1E0:50:23:11:12:23 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:26:0%:47:1E0:40:26:10:16:26 0/0:0:0:0:0:24:0%:44:1E0:38:24:6:18:24 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:24 0/0:0:0:0:0:23:0%:44:1E0:52:23:11:12:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:32 0/0:0:0:0:0:32:0%:59:1E0:48:32:16:16:33 0/0:0:0:0:0:20:0%:36:1E0:44:20:9:11:20 0/0:0:0:0:0:55:0%:99:1E0:43:55:25:30:55 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:29 0/0:0:0:0:0:55:0%:99:1E0:43:55:25:30:55 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:21:0%:40:1E0:42:21:7:14:21 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:31 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:26:0%:47:1E0:48:26:12:14:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:24 0/0:0:0:0:0:27:0%:52:1E0:47:27:7:20:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:38 0/0:0:0:0:0:17:0%:33:1E0:42:17:11:6:18 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:39 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:36 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:38:19:19:39:97.44%:99:1.4697E-21:38:1:1:0:39 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:22:0%:40:1E0:44:22:14:8:24 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:35:0%:67:1E0:40:35:18:17:37 0/0:0:0:0:0:40:0%:74:1E0:40:40:15:25:42 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:24:22:47 0/0:0:0:0:0:39:0%:74:1E0:40:39:18:21:39 0/0:0:0:0:0:53:0%:99:1E0:41:53:19:34:54 0/0:0:0:0:0:54:0%:99:1E0:42:54:25:29:54 1/1:43:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:38:1:0:1:20:5%:27:5E-1:38:19:8:11:21 0/0:0:0:0:0:48:0%:89:1E0:38:48:23:25:52 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:42 0/0:0:0:0:0:46:0%:85:1E0:40:46:18:28:46 0/0:0:0:0:0:41:0%:78:1E0:38:41:19:22:42 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:32 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 0/0:0:0:0:0:44:0%:81:1E0:42:44:23:21:45 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:45:0%:85:1E0:39:45:21:24:47 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:37 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:43 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:30 0/0:0:0:0:0:55:0%:99:1E0:38:55:28:27:55 0/0:0:0:0:0:44:0%:81:1E0:45:44:25:19:44 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:60:0%:99:1E0:41:60:25:35:61 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:40:0%:74:1E0:43:40:11:29:40 0/0:0:0:0:0:34:0%:62:1E0:44:34:16:18:35 0/0:0:0:0:0:18:0%:32:1E0:48:18:10:8:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:49:0%:93:1E0:43:49:26:23:49 0/0:0:0:0:0:56:0%:99:1E0:42:56:31:25:57 0/0:0:0:0:0:44:0%:81:1E0:40:44:21:23:44 MTB_anc 4218995 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|echA21_Rv3774|gene3855|transcript|Transcript_gene3855|Coding|1/1|c.147T>C|p.Arg49Arg|147/825|147/825|49/274||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4218995T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4218995T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:51:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:50:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:53:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:46:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:33:16:17:34:97.06%:99:1.3852E-19:0:0:0:0:35 1/1:49:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:51:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:45:25:20:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:67:33:34:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:42:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:48:24:24:48:100%:99:1.554E-28:0:0:0:0:50 1/1:39:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:66:34:32:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 4227026 . GCGA G . PASS AC=3;AF=0.010;AN=300;ANN=G|disruptive_inframe_deletion|MODERATE|Rv3780_Rv3780|gene3862|transcript|Transcript_gene3862|Coding|1/1|c.50_52delACG|p.Asp17del|50/537|50/537|17/178||INFO_REALIGN_3_PRIME,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4227027_4227029delCGA||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4227027_4227029delCGA||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:35:0%:67:1E0:42:35:25:10:35 0/0:0:0:0:0:13:0%:25:1E0:48:13:8:5:13 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:41 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:12:16:30 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:42 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:21 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 0/0:0:0:0:0:25:0%:48:1E0:40:25:17:8:26 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:11:19:30 0/0:60:1:0:1:48:2.08%:76:5E-1:39:47:25:22:49 0/0:0:0:0:0:19:0%:37:1E0:40:19:15:4:19 0/0:0:0:0:0:30:0%:55:1E0:42:30:19:11:31 0/0:0:0:0:0:22:0%:40:1E0:40:22:14:8:22 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:27 0/0:0:0:0:0:18:0%:32:1E0:44:18:10:8:18 0/0:30:1:1:0:23:4.35%:34:5E-1:42:22:13:9:24 0/0:0:0:0:0:23:0%:44:1E0:41:23:10:13:23 0/0:0:0:0:0:40:0%:74:1E0:41:40:19:21:41 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:25:11:36 0/0:0:0:0:0:27:0%:52:1E0:40:27:17:10:28 0/0:0:0:0:0:20:0%:36:1E0:47:20:8:12:20 0/0:0:0:0:0:24:0%:44:1E0:39:24:16:8:24 0/0:0:0:0:0:16:0%:29:1E0:41:16:7:9:16 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:37:0%:70:1E0:40:37:22:15:37 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:33 0/0:0:0:0:0:26:0%:47:1E0:39:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:15:0%:29:1E0:36:15:6:9:15 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:34 0/0:0:0:0:0:56:0%:99:1E0:43:56:31:25:57 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:41 0/0:0:0:0:0:57:0%:99:1E0:44:57:27:30:60 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:32 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:12:10:22 0/0:0:0:0:0:24:0%:44:1E0:39:24:12:12:25 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:20:9:30 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:34 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:46 0/0:0:0:0:0:20:0%:36:1E0:42:20:14:6:20 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:35 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:20:8:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:26 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:32 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:31 0/0:0:0:0:0:21:0%:40:1E0:44:21:11:10:21 0/0:0:0:0:0:41:0%:78:1E0:39:41:25:16:42 0/0:0:0:0:0:44:0%:81:1E0:46:44:17:27:44 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:25 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:43 0/0:0:0:0:0:38:0%:70:1E0:41:38:27:11:38 0/0:0:0:0:0:31:0%:59:1E0:47:31:13:18:31 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:43 0/0:0:0:0:0:51:0%:97:1E0:42:51:32:19:51 0/0:0:0:0:0:18:0%:32:1E0:43:18:8:10:18 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:16:0%:29:1E0:43:16:8:8:16 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:37 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:16:0%:29:1E0:41:16:9:7:16 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:30 0/0:0:0:0:0:36:0%:66:1E0:40:36:20:16:36 0/0:0:0:0:0:15:0%:29:1E0:41:15:9:6:15 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:29:0%:55:1E0:40:29:19:10:29 0/0:0:0:0:0:25:0%:48:1E0:39:25:15:10:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:36:0%:66:1E0:41:36:21:15:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:36 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:33:0%:63:1E0:49:33:20:13:34 0/0:0:0:0:0:56:0%:99:1E0:39:56:32:24:57 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:42 0/0:0:0:0:0:45:0%:85:1E0:40:45:25:20:46 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:29 0/0:0:0:0:0:27:0%:52:1E0:39:27:18:9:29 0/0:0:0:0:0:33:0%:63:1E0:37:33:23:10:34 0/0:0:0:0:0:35:0%:67:1E0:38:35:21:14:37 0/0:0:0:0:0:28:0%:51:1E0:38:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:23 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:38 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:35 0/0:0:0:0:0:29:0%:55:1E0:36:29:17:12:29 0/0:0:0:0:0:21:0%:40:1E0:38:21:18:3:22 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:29 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:32 0/0:0:0:0:0:25:0%:48:1E0:41:25:15:10:25 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:35 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:38 0/0:0:0:0:0:31:0%:59:1E0:40:31:19:12:31 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:21:0%:40:1E0:37:21:12:9:21 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:36 0/0:0:0:0:0:32:0%:59:1E0:38:32:20:12:32 0/0:0:0:0:0:29:0%:55:1E0:36:29:21:8:31 0/0:0:0:0:0:28:0%:51:1E0:36:28:15:13:28 0/0:32:1:1:0:31:3.23%:48:5E-1:39:30:20:10:32 0/0:0:0:0:0:33:0%:63:1E0:36:33:20:13:35 0/0:0:0:0:0:69:0%:99:1E0:39:69:39:30:69 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:49 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:42:0%:77:1E0:36:42:28:14:44 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:34 0/0:0:0:0:0:54:0%:99:1E0:40:54:29:25:54 0/0:0:0:0:0:40:0%:74:1E0:38:40:20:20:42 0/0:0:0:0:0:33:0%:63:1E0:36:33:25:8:34 0/1:36:37:23:14:47:78.72%:99:2.6563E-17:35:10:5:5:47 0/0:0:0:0:0:31:0%:59:1E0:35:31:17:14:32 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:32:0%:59:1E0:38:32:18:14:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:21:12:34 0/0:0:0:0:0:42:0%:77:1E0:36:42:30:12:42 0/0:0:0:0:0:31:0%:59:1E0:37:31:23:8:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:18:8:26 0/0:0:0:0:0:50:0%:92:1E0:38:50:29:21:50 0/0:0:0:0:0:24:0%:44:1E0:41:24:8:16:25 0/0:0:0:0:0:48:0%:89:1E0:37:48:33:15:48 0/0:0:0:0:0:30:0%:55:1E0:39:30:18:12:31 0/0:38:1:0:1:50:2%:80:5E-1:40:49:24:25:50 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:23:0%:44:1E0:37:23:18:5:23 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:36 0/0:0:0:0:0:40:0%:74:1E0:39:40:20:20:40 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:36:0%:66:1E0:37:36:25:11:36 0/0:0:0:0:0:41:0%:78:1E0:39:41:23:18:43 0/0:0:0:0:0:47:0%:89:1E0:39:47:31:16:49 0/0:0:0:0:0:19:0%:37:1E0:39:19:12:7:19 MTB_anc 4228892 . C G . PASS AC=14;AF=0.047;AN=300;ANN=G|missense_variant|MODERATE|glfT1_Rv3782|gene3864|transcript|Transcript_gene3864|Coding|1/1|c.546C>G|p.Asp182Glu|546/915|546/915|182/304||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4228892C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4228892C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:55:0%:99:1E0:41:55:29:26:56 0/0:0:0:0:0:9:0%:18:1E0:46:9:3:6:10 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 0/0:0:0:0:0:30:0%:55:1E0:46:30:16:14:31 0/0:0:0:0:0:32:0%:59:1E0:44:32:13:19:34 0/0:0:0:0:0:14:0%:25:1E0:41:14:5:9:14 0/0:0:0:0:0:31:0%:59:1E0:44:31:13:18:31 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:37:0%:70:1E0:39:37:19:18:37 0/0:0:0:0:0:15:0%:29:1E0:42:15:7:8:16 0/0:0:0:0:0:54:0%:99:1E0:39:54:26:28:55 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:41:28:10:18:30 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:23:0%:44:1E0:45:23:14:9:24 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:34:0%:62:1E0:43:34:11:23:34 0/0:0:0:0:0:33:0%:63:1E0:38:33:11:22:34 0/0:0:0:0:0:42:0%:77:1E0:41:42:23:19:43 0/0:0:0:0:0:17:0%:33:1E0:43:17:11:6:17 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:21:0%:40:1E0:42:21:6:15:22 0/0:0:0:0:0:23:0%:44:1E0:41:23:12:11:23 0/0:0:0:0:0:20:0%:36:1E0:40:20:8:12:21 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:21 0/0:0:0:0:0:31:0%:59:1E0:42:31:10:21:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:17:21:40 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:24 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:29:0%:55:1E0:45:29:15:14:30 0/0:0:0:0:0:29:0%:55:1E0:40:29:14:15:31 0/0:0:0:0:0:31:0%:59:1E0:38:31:11:20:34 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:47 0/0:0:0:0:0:54:0%:99:1E0:41:54:26:28:55 0/0:0:0:0:0:35:0%:67:1E0:41:35:11:24:35 0/0:0:0:0:0:21:0%:40:1E0:41:21:11:10:22 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:10:9:19 0/0:0:0:0:0:30:0%:55:1E0:39:30:12:18:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:11:7:20 0/0:0:0:0:0:25:0%:48:1E0:40:25:8:17:26 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:14:16:31 0/0:0:0:0:0:40:0%:74:1E0:42:40:17:23:41 0/0:0:0:0:0:16:0%:29:1E0:45:16:6:10:18 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:25:0%:48:1E0:43:25:12:13:25 0/0:0:0:0:0:21:0%:40:1E0:42:21:9:12:21 0/0:0:0:0:0:41:0%:78:1E0:41:41:18:23:41 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:36 0/0:0:0:0:0:21:0%:40:1E0:45:21:10:11:21 0/0:0:0:0:0:37:0%:70:1E0:39:37:10:27:37 0/0:0:0:0:0:36:0%:66:1E0:44:36:23:13:36 0/0:0:0:0:0:26:0%:47:1E0:37:26:11:15:29 0/0:0:0:0:0:40:0%:74:1E0:40:40:16:24:40 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:43 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:27 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:43 0/0:0:0:0:0:52:0%:96:1E0:41:52:24:28:52 0/0:0:0:0:0:25:0%:48:1E0:41:25:9:16:26 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:33 0/0:0:0:0:0:19:0%:37:1E0:47:19:7:12:19 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:28:0%:51:1E0:44:28:8:20:29 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:39:1:1:0:41:2.44%:66:5E-1:44:40:17:23:41 0/0:0:0:0:0:36:0%:66:1E0:36:36:14:22:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:42 0/0:0:0:0:0:24:0%:44:1E0:40:24:9:15:24 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 0/0:0:0:0:0:22:0%:40:1E0:40:22:13:9:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:8:18:27 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:44:0%:81:1E0:40:44:23:21:44 0/0:0:0:0:0:40:0%:74:1E0:41:40:13:27:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:6:18:25 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:21 0/0:0:0:0:0:29:0%:55:1E0:39:29:8:21:29 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:39 0/0:0:0:0:0:23:0%:44:1E0:46:23:15:8:24 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:21 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:20:22:42 0/0:0:0:0:0:22:0%:40:1E0:42:22:6:16:22 0/0:0:0:0:0:33:0%:63:1E0:40:33:11:22:34 0/0:0:0:0:0:23:0%:44:1E0:40:23:6:17:24 0/0:0:0:0:0:23:0%:44:1E0:37:23:11:12:24 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:8:10:19 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:33:6:27:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:31:0%:59:1E0:40:31:17:14:33 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:21 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:26 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:30 0/0:0:0:0:0:34:0%:62:1E0:40:34:11:23:35 0/0:0:0:0:0:30:0%:55:1E0:36:30:16:14:32 0/0:0:0:0:0:39:0%:74:1E0:37:39:17:22:41 0/0:0:0:0:0:30:0%:55:1E0:37:30:11:19:31 0/0:0:0:0:0:36:0%:66:1E0:39:36:21:15:37 0/0:0:0:0:0:29:0%:55:1E0:38:29:14:15:30 0/0:0:0:0:0:43:0%:82:1E0:37:43:23:20:45 0/0:0:0:0:0:44:0%:81:1E0:39:44:23:21:46 0/0:0:0:0:0:24:0%:44:1E0:43:24:14:10:24 0/0:0:0:0:0:19:0%:37:1E0:36:19:7:12:21 0/0:0:0:0:0:26:0%:47:1E0:39:26:14:12:29 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:40 0/0:0:0:0:0:34:0%:62:1E0:39:34:19:15:40 0/0:0:0:0:0:34:0%:62:1E0:36:34:16:18:36 0/0:38:1:0:1:42:2.38%:66:5E-1:37:41:21:20:43 0/0:0:0:0:0:39:0%:74:1E0:36:39:19:20:40 0/0:0:0:0:0:44:0%:81:1E0:39:44:21:23:46 0/0:0:0:0:0:24:0%:44:1E0:35:24:7:17:25 0/0:0:0:0:0:38:0%:70:1E0:36:38:19:19:43 0/0:0:0:0:0:31:0%:59:1E0:35:31:8:23:34 0/0:0:0:0:0:28:0%:51:1E0:39:28:6:22:30 0/0:0:0:0:0:34:0%:62:1E0:37:34:14:20:35 0/0:0:0:0:0:27:0%:52:1E0:39:27:11:16:28 0/0:0:0:0:0:59:0%:99:1E0:37:59:18:41:59 0/0:0:0:0:0:34:0%:62:1E0:39:34:12:22:34 0/0:0:0:0:0:37:0%:70:1E0:39:37:13:24:39 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:9:17:29 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:14:17:33 0/0:0:0:0:0:30:0%:55:1E0:35:30:10:20:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:35:0%:67:1E0:41:35:10:25:36 0/0:0:0:0:0:39:0%:74:1E0:38:39:15:24:41 0/0:0:0:0:0:22:0%:40:1E0:40:22:8:14:22 MTB_anc 4230272 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|epiB_Rv3784|gene3866|transcript|Transcript_gene3866|Coding|1/1|c.17C>T|p.Thr6Ile|17/981|17/981|6/326||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4230272C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4230272C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:43:45:19:26:45 0/0:0:0:0:0:14:0%:25:1E0:45:14:3:11:14 0/0:0:0:0:0:54:0%:99:1E0:44:54:33:21:55 0/0:0:0:0:0:26:0%:47:1E0:45:26:8:18:26 0/0:0:0:0:0:33:0%:63:1E0:44:33:14:19:34 0/0:0:0:0:0:31:0%:59:1E0:47:31:20:11:32 0/0:0:0:0:0:37:0%:70:1E0:47:37:22:15:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:13:25:39 0/0:0:0:0:0:37:0%:70:1E0:49:37:17:20:37 0/0:0:0:0:0:24:0%:44:1E0:50:24:10:14:24 0/0:0:0:0:0:35:0%:67:1E0:51:35:17:18:36 0/0:0:0:0:0:46:0%:85:1E0:42:46:26:20:46 0/0:0:0:0:0:26:0%:47:1E0:52:26:14:12:26 0/0:0:0:0:0:46:0%:85:1E0:42:46:19:27:46 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:7:22:29 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:20:0%:36:1E0:43:20:7:13:20 0/0:0:0:0:0:19:0%:37:1E0:48:19:13:6:19 0/0:0:0:0:0:23:0%:44:1E0:44:23:7:16:23 0/0:0:0:0:0:55:0%:99:1E0:44:55:25:30:56 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:35 0/0:0:0:0:0:52:0%:96:1E0:46:52:24:28:52 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:20:0%:36:1E0:45:20:13:7:20 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:22 0/0:0:0:0:0:19:0%:37:1E0:45:19:7:12:20 0/0:0:0:0:0:28:0%:51:1E0:47:28:12:16:28 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:15:10:25 0/0:0:0:0:0:26:0%:47:1E0:44:26:15:11:26 0/0:0:0:0:0:43:0%:82:1E0:46:43:23:20:44 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:44:0%:81:1E0:49:44:18:26:45 0/0:0:0:0:0:50:0%:92:1E0:47:50:18:32:50 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:35 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:40:0%:74:1E0:44:40:17:23:40 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:32 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:44:30:8:22:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:27 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:25 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:18:31:50 0/0:0:0:0:0:17:0%:33:1E0:49:17:10:7:17 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:36 0/0:0:0:0:0:26:0%:47:1E0:51:26:10:16:27 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:20:0%:36:1E0:46:20:9:11:21 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:19:16:36 0/0:0:0:0:0:30:0%:55:1E0:50:30:20:10:30 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:31 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:0:0:0:0:36:0%:66:1E0:43:36:10:26:36 0/0:0:0:0:0:29:0%:55:1E0:49:29:18:11:29 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:57:0%:99:1E0:44:57:30:27:58 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:10:0%:17:1E0:45:10:4:6:10 0/0:0:0:0:0:14:0%:25:1E0:40:14:6:8:14 0/0:0:0:0:0:33:0%:63:1E0:46:33:14:19:35 0/0:0:0:0:0:27:0%:52:1E0:50:27:11:16:27 0/0:0:0:0:0:26:0%:47:1E0:47:26:14:12:27 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:29:0%:55:1E0:45:29:17:12:30 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:25 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:29 0/0:0:0:0:0:29:0%:55:1E0:51:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:13:17:31 0/0:38:1:1:0:42:2.38%:66:5E-1:42:41:22:19:42 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:11:17:28 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:17:19:36 0/0:0:0:0:0:21:0%:40:1E0:45:21:12:9:21 0/0:0:0:0:0:42:0%:77:1E0:50:42:25:17:42 0/0:0:0:0:0:25:0%:48:1E0:49:25:19:6:25 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:24 0/0:0:0:0:0:46:0%:85:1E0:42:46:32:14:47 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:37 0/0:0:0:0:0:32:0%:59:1E0:45:32:19:13:33 0/0:0:0:0:0:42:0%:77:1E0:42:42:17:25:42 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:17:0%:33:1E0:41:17:9:8:18 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:0:39:0%:74:1E0:42:39:20:19:39 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:26:0%:47:1E0:43:26:10:16:26 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:20:0%:36:1E0:49:20:8:12:20 0/0:0:0:0:0:35:0%:67:1E0:41:35:13:22:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:17:12:29 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:27:0%:52:1E0:41:27:13:14:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:15:14:29 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:45 0/0:0:0:0:0:35:0%:67:1E0:42:35:16:19:37 0/0:0:0:0:0:45:0%:85:1E0:37:45:21:24:47 0/0:0:0:0:0:43:0%:82:1E0:40:43:19:24:44 0/0:0:0:0:0:36:0%:66:1E0:44:36:12:24:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:41:0%:78:1E0:42:41:26:15:42 0/0:0:0:0:0:63:0%:99:1E0:40:63:36:27:64 0/0:0:0:0:0:29:0%:55:1E0:43:29:9:20:30 0/0:0:0:0:0:26:0%:47:1E0:38:26:12:14:26 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:39 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:34 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:48 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:42 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:43 0/0:0:0:0:0:59:0%:99:1E0:42:59:28:31:60 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:33 0/0:0:0:0:0:36:0%:66:1E0:40:36:16:20:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:13:24:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:18:12:34 0/0:0:0:0:0:37:0%:70:1E0:40:37:25:12:38 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:37 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:44:0%:81:1E0:39:44:18:26:45 0/0:0:0:0:0:42:0%:77:1E0:40:42:18:24:43 0/0:0:0:0:0:46:0%:85:1E0:44:46:19:27:46 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:0:0:0:0:23:0%:44:1E0:41:23:13:10:24 0/0:0:0:0:0:37:0%:70:1E0:42:37:20:17:37 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:42 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:27 0/0:0:0:0:0:29:0%:55:1E0:42:29:9:20:29 0/0:0:0:0:0:59:0%:99:1E0:42:59:29:30:59 0/0:0:0:0:0:63:0%:99:1E0:43:63:30:33:64 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:30 MTB_anc 4232146 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv3785_Rv3785|gene3867|transcript|Transcript_gene3867|Coding|1/1|c.827T>G|p.Leu276Arg|827/1074|827/1074|276/357||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4232146T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4232146T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:54:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:51:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:64:37:27:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:48:24:24:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:49:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:48:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:52:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:19:19:39:97.44%:99:1.4697E-21:39:1:0:1:39 1/1:47:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:26:14:12:27:96.3%:99:1.4382E-14:32:1:1:0:28 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:45:30:15:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:51:24:27:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:38:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:57:29:28:58:98.28%:99:9.6072E-33:60:1:0:1:58 1/1:42:69:29:40:69:100%:99:4.233E-41:0:0:0:0:69 1/1:42:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:49:23:26:50:98%:99:5.0549E-28:37:1:1:0:52 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:50:26:24:51:98.04%:99:1.3013E-28:33:1:1:0:51 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 MTB_anc 4232293 . C G . PASS AC=124;AF=0.413;AN=300;ANN=G|missense_variant|MODERATE|Rv3785_Rv3785|gene3867|transcript|Transcript_gene3867|Coding|1/1|c.974C>G|p.Ala325Gly|974/1074|974/1074|325/357||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4232293C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4232293C>G||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:39:0%:74:1E0:46:39:20:19:40 1/1:46:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:35:0%:67:1E0:42:35:21:14:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:20:9:30 1/1:50:29:16:13:30:96.67%:99:3.3259E-17:0:0:0:0:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 1/1:49:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 1/1:43:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:50:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:46:51:34:17:51:100%:99:2.5024E-30:0:0:0:0:51 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:33 0/0:0:0:0:0:44:0%:81:1E0:45:44:26:18:44 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:60:1:0:1:33:3.03%:52:5E-1:46:32:17:15:33 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 1/1:42:60:40:20:60:100%:99:1.035E-35:0:0:0:0:60 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 0/0:0:0:0:0:14:0%:25:1E0:49:14:6:8:16 1/1:47:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:21:0%:40:1E0:49:21:9:12:21 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 1/1:45:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:41:0%:78:1E0:48:41:20:21:41 1/1:44:25:17:8:26:96.15%:99:5.4444E-14:60:1:1:0:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:21:12:33 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:49:62:36:26:62:100%:99:6.5755E-37:0:0:0:0:62 0/0:0:0:0:0:51:0%:97:1E0:47:51:22:29:52 1/1:48:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:36 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:32 1/1:46:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:24:0%:44:1E0:48:24:10:14:25 1/1:43:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:38:22:16:39:97.44%:99:1.4508E-22:0:0:0:0:40 1/1:47:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 0/0:0:0:0:0:41:0%:78:1E0:44:41:25:16:44 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:32 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:31:0%:59:1E0:44:31:15:16:31 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:31 0/0:0:0:0:0:37:0%:70:1E0:48:37:23:14:38 0/0:0:0:0:0:47:0%:89:1E0:46:47:27:20:49 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:40 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:32:0%:59:1E0:50:32:22:10:32 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:46:0%:85:1E0:51:46:22:24:47 0/0:0:0:0:0:48:0%:89:1E0:43:48:34:14:48 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:25:12:13:26:100%:99:7.9107E-15:0:0:0:0:27 1/1:50:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:49:0%:93:1E0:44:49:27:22:50 1/1:45:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:37 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:30:0%:55:1E0:46:30:17:13:30 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:37 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:35 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:34 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:43 0/0:0:0:0:0:31:0%:59:1E0:42:31:22:9:32 0/0:60:1:0:1:41:2.44%:66:5E-1:42:40:21:19:41 0/0:0:0:0:0:32:0%:59:1E0:42:32:17:15:32 0/0:0:0:0:0:30:0%:55:1E0:45:30:14:16:31 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:43 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:38 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:44:0%:81:1E0:47:44:25:19:45 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:34 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:38 0/0:0:0:0:0:30:0%:55:1E0:43:30:15:15:30 0/0:0:0:0:0:31:0%:59:1E0:39:31:23:8:32 0/0:0:0:0:0:41:0%:78:1E0:43:41:27:14:42 0/0:0:0:0:0:47:0%:89:1E0:38:47:29:18:48 0/0:0:0:0:0:38:0%:70:1E0:39:38:28:10:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:21:16:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:41 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:20 0/0:0:0:0:0:62:0%:99:1E0:44:62:38:24:63 0/0:0:0:0:0:61:0%:99:1E0:43:61:26:35:62 0/0:0:0:0:0:23:0%:44:1E0:43:23:17:6:24 0/0:0:0:0:0:29:0%:55:1E0:45:29:10:19:31 0/0:0:0:0:0:39:0%:74:1E0:40:39:24:15:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:33 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:57 0/0:0:0:0:0:54:0%:99:1E0:39:54:26:28:60 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:50 0/0:0:0:0:0:39:0%:74:1E0:45:39:23:16:39 0/0:39:1:1:0:31:3.23%:48:5E-1:42:30:17:13:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:24:14:38 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:41 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:41 0/0:0:0:0:0:40:0%:74:1E0:39:40:27:13:41 0/0:0:0:0:0:50:0%:92:1E0:40:50:26:24:50 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:35 1/1:40:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:41 0/0:0:0:0:0:38:0%:70:1E0:43:38:15:23:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:14:24:39 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:45:0%:85:1E0:43:45:30:15:47 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:49 1/1:43:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 MTB_anc 4232327 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv3785_Rv3785|gene3867|transcript|Transcript_gene3867|Coding|1/1|c.1008G>A|p.Arg336Arg|1008/1074|1008/1074|336/357||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4232327G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4232327G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:60:40:20:60:100%:99:1.035E-35:0:0:0:0:62 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:48:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:49:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:25:15:10:26:96.15%:99:5.4444E-14:24:1:1:0:28 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:42:26:16:43:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:47:32:15:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:45:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:40:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:62:39:23:62:100%:99:6.5755E-37:0:0:0:0:64 1/1:41:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:38:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:58 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:40:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:51:32:19:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:58:36:22:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:41:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 MTB_anc 4240671 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|embC_Rv3793|gene3875|transcript|Transcript_gene3875|Coding|1/1|c.809T>C|p.Ile270Thr|809/3285|809/3285|270/1094||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|ethambutol|||n.4240671T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4240671T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4240671T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:39:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:36:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:35:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:10:1:9:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:35:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:36:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:14 1/1:34:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:8:3:5:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:18:8:10:19:94.74%:92:5.6585E-10:51:1:0:1:19 1/1:35:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:34:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:15:2:13:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:36:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:48:13:35:48:100%:99:1.554E-28:0:0:0:0:48 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:36:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:35:33:10:23:34:97.06%:99:1.2301E-18:27:1:0:1:34 1/1:35:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:36:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:35:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:35:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:34:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:36:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:36:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:37:43:12:31:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:36:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:45:12:33:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:35:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:34:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:37:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:35:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:22:3:19:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:34:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:35:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:34:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:35:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:35:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:36:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:35:25:4:21:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:35:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:35:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:35:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:35:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:35:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:35:48:15:33:48:100%:99:1.554E-28:0:0:0:0:51 1/1:34:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:35:31:7:24:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:35:35:5:30:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:35:36:9:27:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:35:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:35:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:35:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:35:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:36:16:4:12:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:36:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:40:5:35:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:36:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:34:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:35:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:36:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:34:7:27:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:35:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 4242803 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|embC_Rv3793|gene3875|transcript|Transcript_gene3875|Coding|1/1|c.2941G>C|p.Val981Leu|2941/3285|2941/3285|981/1094||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|ethambutol|||n.4242803G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4242803G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4242803G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:11:10:1:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:32:12:20:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:38:20:18:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:50:26:14:12:27:96.3%:99:1.4382E-14:60:1:0:1:28 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:48:29:19:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:46:31:15:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:46:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:47:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:54:35:19:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:37:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:61:24:37:61:100%:99:2.609E-36:0:0:0:0:62 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:64:34:30:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 4246081 . C T . PASS AC=13;AF=0.043;AN=300;ANN=T|missense_variant|MODERATE|embA_Rv3794|gene3876|transcript|Transcript_gene3876|Coding|1/1|c.2849C>T|p.Pro950Leu|2849/3285|2849/3285|950/1094||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_macrophages|||n.4246081C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4246081C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4246081C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|ethambutol|||n.4246081C>T||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:44 0/0:0:0:0:0:18:0%:32:1E0:46:18:9:9:18 0/0:0:0:0:0:45:0%:85:1E0:46:45:20:25:45 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:18 0/0:0:0:0:0:22:0%:40:1E0:46:22:12:10:22 0/0:0:0:0:0:32:0%:59:1E0:48:32:19:13:33 0/0:60:1:0:1:43:2.33%:70:5E-1:53:42:22:20:43 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:16:0%:29:1E0:51:16:8:8:17 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:43 0/0:0:0:0:0:20:0%:36:1E0:45:20:8:12:20 0/0:0:0:0:0:60:0%:99:1E0:43:60:26:34:61 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:32 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:26 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:22:0%:40:1E0:42:22:8:14:22 0/0:0:0:0:0:36:0%:66:1E0:46:36:13:23:37 0/0:0:0:0:0:20:0%:36:1E0:53:20:11:9:20 0/0:0:0:0:0:36:0%:66:1E0:46:36:19:17:36 0/0:60:1:0:1:32:3.12%:48:5E-1:43:31:14:17:32 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:25 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:32 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:26 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:39:0%:74:1E0:46:39:13:26:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:30 0/0:0:0:0:0:29:0%:55:1E0:48:29:14:15:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:41:0%:78:1E0:44:41:17:24:41 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:31 0/0:0:0:0:0:59:0%:99:1E0:48:59:29:30:59 0/0:0:0:0:0:37:0%:70:1E0:47:37:19:18:37 0/0:0:0:0:0:47:0%:89:1E0:44:47:24:23:48 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:26 0/0:0:0:0:0:43:0%:82:1E0:45:43:22:21:44 0/0:0:0:0:0:31:0%:59:1E0:40:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:44:30:7:23:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:43:0%:82:1E0:45:43:24:19:44 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:37 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:45:35:24:11:35 0/0:0:0:0:0:19:0%:37:1E0:54:19:7:12:19 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:14:24:38 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:47 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:22:0%:40:1E0:43:22:11:11:22 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:37 0/0:0:0:0:0:42:0%:77:1E0:49:42:17:25:43 0/1:44:10:4:6:21:47.62%:36:2.3971E-4:41:11:7:4:21 0/0:0:0:0:0:39:0%:74:1E0:46:39:17:22:39 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:42 1/1:53:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:20:19:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:46:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:46:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:30:0%:55:1E0:50:30:12:18:30 0/0:0:0:0:0:22:0%:40:1E0:49:22:10:12:22 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:25:0%:48:1E0:55:25:16:9:25 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:17 0/0:0:0:0:0:30:0%:55:1E0:47:30:14:16:30 0/0:0:0:0:0:35:0%:67:1E0:41:35:16:19:36 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:31:0%:59:1E0:42:31:15:16:31 0/0:0:0:0:0:39:0%:74:1E0:49:39:15:24:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:41:0%:78:1E0:42:41:16:25:42 0/0:0:0:0:0:29:0%:55:1E0:42:29:13:16:30 0/0:0:0:0:0:19:0%:37:1E0:44:19:14:5:19 0/0:0:0:0:0:26:0%:47:1E0:39:26:16:10:27 0/0:0:0:0:0:37:0%:70:1E0:40:37:15:22:37 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:37 0/0:0:0:0:0:21:0%:40:1E0:44:21:14:7:22 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:45:22:9:13:22 0/0:0:0:0:0:38:0%:70:1E0:48:38:15:23:39 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:25 0/0:0:0:0:0:42:0%:77:1E0:41:42:26:16:42 0/0:0:0:0:0:30:0%:55:1E0:42:30:16:14:30 0/0:0:0:0:0:47:0%:89:1E0:45:47:25:22:48 0/0:0:0:0:0:28:0%:51:1E0:45:28:17:11:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:32 0/0:0:0:0:0:36:0%:66:1E0:48:36:14:22:36 0/0:0:0:0:0:40:0%:74:1E0:47:40:19:21:42 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:30:0%:55:1E0:46:30:9:21:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:12:17:30 0/0:0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:0:28:0%:51:1E0:41:28:14:14:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:11:21:33 0/0:0:0:0:0:23:0%:44:1E0:49:23:13:10:23 0/0:0:0:0:0:21:0%:40:1E0:43:21:10:11:21 0/0:0:0:0:0:40:0%:74:1E0:46:40:22:18:41 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:47:33:14:19:33 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:33 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:23:0%:44:1E0:40:23:9:14:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:13:19:32 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:36 0/0:0:0:0:0:37:0%:70:1E0:38:37:18:19:39 0/0:0:0:0:0:25:0%:48:1E0:37:25:10:15:26 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:44 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:38 0/0:0:0:0:0:55:0%:99:1E0:42:55:30:25:56 0/0:0:0:0:0:54:0%:99:1E0:42:54:23:31:56 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:32 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:46:0%:85:1E0:38:46:21:25:47 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:35 0/0:0:0:0:0:54:0%:99:1E0:40:54:29:25:54 0/0:0:0:0:0:39:0%:74:1E0:37:39:16:23:40 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:45 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:47 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:49:0%:93:1E0:39:49:17:32:49 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:41:0%:78:1E0:39:41:17:24:44 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:52:0%:96:1E0:39:52:27:25:52 0/0:38:2:0:2:54:3.7%:77:2.4766E-1:42:52:22:30:54 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:42 0/0:0:0:0:0:56:0%:99:1E0:39:56:23:33:57 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:28 0/0:0:0:0:0:25:0%:48:1E0:41:25:13:12:25 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:24 0/0:0:0:0:0:42:0%:77:1E0:43:42:16:26:42 0/0:0:0:0:0:47:0%:89:1E0:40:47:19:28:49 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:28 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:40 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:49:0%:93:1E0:41:49:23:26:51 0/0:0:0:0:0:39:0%:74:1E0:43:39:22:17:39 MTB_anc 4247646 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|embB_Rv3795|gene3877|transcript|Transcript_gene3877|Coding|1/1|c.1133C>A|p.Ala378Glu|1133/3297|1133/3297|378/1098||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|ethambutol|||n.4247646C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4247646C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4247646C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:19:29:48:100%:99:1.554E-28:0:0:0:0:53 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:44:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:25 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:22:5:17:23:95.65%:99:2.9149E-12:38:1:1:0:23 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:27 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:39 1/1:43:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:54 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:32 1/1:41:36:17:19:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:41:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:45:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:42:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:24:7:17:24:100%:99:3.101E-14:0:0:0:0:27 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:49:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:65:26:39:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:41:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:24:6:18:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:26 1/1:43:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:49:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:46 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:40:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:54 1/1:40:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:51 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:27 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:17:17:35:97.14%:99:3.5146E-20:0:0:0:0:37 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:40:13:27:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:38:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:50 1/1:37:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:41:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:42:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:41:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:46 1/1:38:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:38:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:35 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:37:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:40 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:37:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:30 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:38:48:32:16:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:40:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:40 MTB_anc 4251193 . T C . PASS AC=1;AF=3.333e-03;AN=300;ANN=C|missense_variant|MODERATE|fadE35_Rv3797|gene3879|transcript|Transcript_gene3879|Coding|1/1|c.109T>C|p.Tyr37His|109/1782|109/1782|37/593||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4251193T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4251193T>C||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:42:0%:77:1E0:46:42:18:24:42 0/0:0:0:0:0:24:0%:44:1E0:49:24:14:10:24 0/0:0:0:0:0:54:0%:99:1E0:46:54:24:30:54 0/0:0:0:0:0:24:0%:44:1E0:44:24:13:11:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:37:0%:70:1E0:44:37:24:13:37 0/1:53:14:6:8:28:50%:51:6.911E-6:49:14:6:8:30 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:38:0%:70:1E0:50:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:28 0/0:0:0:0:0:37:0%:70:1E0:48:37:24:13:39 0/0:0:0:0:0:41:0%:78:1E0:45:41:27:14:41 0/0:0:0:0:0:26:0%:47:1E0:49:26:12:14:26 0/0:0:0:0:0:40:0%:74:1E0:42:40:16:24:40 0/0:0:0:0:0:18:0%:32:1E0:45:18:10:8:19 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:34 0/0:0:0:0:0:16:0%:29:1E0:48:16:8:8:17 0/0:0:0:0:0:30:0%:55:1E0:46:30:15:15:31 0/0:0:0:0:0:20:0%:36:1E0:46:20:7:13:20 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:47:0%:89:1E0:50:47:26:21:47 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:40 0/0:0:0:0:0:24:0%:44:1E0:43:24:13:11:26 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:14:11:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:7:17:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:11:22:33 0/0:0:0:0:0:28:0%:51:1E0:44:28:19:9:29 0/0:0:0:0:0:21:0%:40:1E0:44:21:9:12:22 0/0:0:0:0:0:40:0%:74:1E0:51:40:22:18:40 0/0:0:0:0:0:25:0%:48:1E0:43:25:17:8:27 0/0:0:0:0:0:46:0%:85:1E0:47:46:25:21:46 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:37 0/0:0:0:0:0:58:0%:99:1E0:48:58:26:32:58 0/0:0:0:0:0:52:0%:96:1E0:49:52:25:27:52 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:34 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:22 0/0:0:0:0:0:21:0%:40:1E0:49:21:7:14:22 0/0:0:0:0:0:25:0%:48:1E0:44:25:15:10:25 0/0:0:0:0:0:31:0%:59:1E0:47:31:21:10:31 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:19 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:37:0%:70:1E0:46:37:20:17:38 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:42 0/0:0:0:0:0:32:0%:59:1E0:51:32:19:13:33 0/0:0:0:0:0:20:0%:36:1E0:48:20:12:8:21 0/0:0:0:0:0:16:0%:29:1E0:49:16:9:7:16 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:36 0/0:0:0:0:0:17:0%:33:1E0:41:17:8:9:17 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:35 0/0:0:0:0:0:33:0%:63:1E0:45:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:28 0/0:0:0:0:0:43:0%:82:1E0:46:43:22:21:43 0/0:0:0:0:0:38:0%:70:1E0:48:38:18:20:39 0/0:0:0:0:0:24:0%:44:1E0:47:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:42 0/0:0:0:0:0:37:0%:70:1E0:46:37:12:25:37 0/0:0:0:0:0:34:0%:62:1E0:47:34:19:15:35 0/0:0:0:0:0:60:0%:99:1E0:47:60:31:29:62 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:0:0:0:0:19:0%:37:1E0:47:19:11:8:19 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:18 0/0:0:0:0:0:33:0%:63:1E0:48:33:15:18:34 0/0:0:0:0:0:37:0%:70:1E0:52:37:20:17:38 0/0:0:0:0:0:21:0%:40:1E0:46:21:12:9:22 0/0:0:0:0:0:30:0%:55:1E0:50:30:16:14:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:38 0/0:0:0:0:0:18:0%:32:1E0:41:18:13:5:19 0/0:0:0:0:0:29:0%:55:1E0:43:29:12:17:29 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:30:0%:55:1E0:41:30:16:14:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:17:10:27 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:31 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:31 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:30 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:32:0%:59:1E0:47:32:16:16:34 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:25:0%:48:1E0:51:25:13:12:27 0/0:0:0:0:0:35:0%:67:1E0:47:35:20:15:35 0/0:0:0:0:0:29:0%:55:1E0:49:29:11:18:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:22:14:36 0/0:0:0:0:0:50:0%:92:1E0:39:50:28:22:50 0/0:0:0:0:0:24:0%:44:1E0:45:24:9:15:25 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:48 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:20:11:32 0/0:0:0:0:0:28:0%:51:1E0:41:28:20:8:32 0/0:0:0:0:0:44:0%:81:1E0:45:44:28:16:44 0/0:0:0:0:0:33:0%:63:1E0:48:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:13:20:34 0/0:0:0:0:0:38:0%:70:1E0:43:38:13:25:38 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:30 0/0:0:0:0:0:21:0%:40:1E0:44:21:16:5:22 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:28 0/0:0:0:0:0:41:0%:78:1E0:48:41:18:23:41 0/0:0:0:0:0:37:0%:70:1E0:42:37:22:15:38 0/0:0:0:0:0:39:0%:74:1E0:47:39:21:18:39 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:35 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:34 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:38 0/0:0:0:0:0:42:0%:77:1E0:41:42:26:16:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:36 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:55:0%:99:1E0:41:55:30:25:55 0/0:0:0:0:0:57:0%:99:1E0:40:57:26:31:59 0/0:0:0:0:0:37:0%:70:1E0:46:37:18:19:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:25 0/0:0:0:0:0:37:0%:70:1E0:41:37:19:18:41 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:37 0/0:0:0:0:0:47:0%:89:1E0:40:47:17:30:50 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:28:10:41 0/0:0:0:0:0:34:0%:62:1E0:40:34:23:11:35 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:57 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:46:0%:85:1E0:44:46:20:26:47 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:38 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:57:0%:99:1E0:40:57:33:24:58 0/0:0:0:0:0:45:0%:85:1E0:41:45:24:21:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:21:16:38 0/0:0:0:0:0:44:0%:81:1E0:42:44:22:22:45 0/0:0:0:0:0:38:0%:70:1E0:46:38:18:20:39 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:37 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:35 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:34 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:38 0/0:0:0:0:0:20:0%:36:1E0:42:20:13:7:20 0/0:0:0:0:0:33:0%:63:1E0:40:33:17:16:34 0/0:0:0:0:0:40:0%:74:1E0:46:40:23:17:41 0/0:0:0:0:0:50:0%:92:1E0:40:50:30:20:54 0/0:0:0:0:0:44:0%:81:1E0:40:44:28:16:44 MTB_anc 4251296 . GC G . PASS AC=1;AF=3.333e-03;AN=300;ANN=G|frameshift_variant|HIGH|fadE35_Rv3797|gene3879|transcript|Transcript_gene3879|Coding|1/1|c.213delC|p.Pro73fs|213/1782|213/1782|71/593||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4251297delC||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4251297delC||||||;HOM=0;LOF=(fadE35_Rv3797|gene3879|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:41:48:30:18:49 0/0:0:0:0:0:24:0%:44:1E0:49:24:15:9:24 0/0:0:0:0:0:48:0%:89:1E0:42:48:25:23:48 0/0:0:0:0:0:17:0%:33:1E0:46:17:10:7:17 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:40:0%:74:1E0:42:40:25:15:40 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:26 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:40:0%:74:1E0:39:40:28:12:42 0/0:0:0:0:0:23:0%:44:1E0:48:23:14:9:23 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:28 0/0:0:0:0:0:32:0%:59:1E0:42:32:20:12:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:34 0/0:0:0:0:0:15:0%:29:1E0:46:15:10:5:16 0/0:0:0:0:0:29:0%:55:1E0:40:29:17:12:30 0/0:37:1:1:0:28:3.57%:41:5E-1:48:27:11:16:29 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:29 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:48:0%:89:1E0:47:48:25:23:48 0/0:60:1:1:0:33:3.03%:52:5E-1:48:32:17:15:33 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:60:1:1:0:16:6.25%:21:5E-1:41:15:8:7:16 0/0:0:0:0:0:35:0%:67:1E0:44:35:17:18:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:23:0%:44:1E0:44:23:11:12:24 0/0:0:0:0:0:41:0%:78:1E0:42:41:15:26:42 0/0:0:0:0:0:29:0%:55:1E0:41:29:18:11:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:32 0/0:0:0:0:0:32:0%:59:1E0:42:32:22:10:33 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:38:1:1:0:35:2.86%:55:5E-1:43:34:13:21:35 0/0:38:1:1:0:40:2.5%:62:5E-1:42:39:23:16:41 0/0:48:1:1:0:57:1.75%:95:5E-1:46:56:33:23:58 0/0:0:0:0:0:45:0%:85:1E0:45:45:17:28:46 0/0:0:0:0:0:37:0%:70:1E0:43:37:24:13:38 0/0:60:1:0:1:28:3.57%:41:5E-1:43:27:12:15:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:22:14:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:17:6:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:40:30:18:12:30 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:24 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:30 0/0:0:0:0:0:40:0%:74:1E0:42:40:24:16:41 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:42 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:39:30:15:15:31 0/0:0:0:0:0:16:0%:29:1E0:46:16:7:9:16 0/0:0:0:0:0:35:0%:67:1E0:42:35:22:13:37 0/0:0:0:0:0:18:0%:32:1E0:39:18:9:9:18 0/0:0:0:0:0:43:0%:82:1E0:40:43:23:20:44 0/0:38:1:1:0:33:3.03%:52:5E-1:41:32:17:15:34 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:36 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:42 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:16:10:26 0/0:0:0:0:0:40:0%:74:1E0:44:40:19:21:42 0/0:0:0:0:0:47:0%:89:1E0:43:47:29:18:50 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:41:0%:78:1E0:48:41:19:22:41 0/0:0:0:0:0:54:0%:99:1E0:46:54:31:23:55 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:28 0/1:45:13:5:8:40:32.5%:44:3.8184E-5:44:27:12:15:40 0/0:0:0:0:0:15:0%:29:1E0:45:15:7:8:16 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:27 0/0:60:1:0:1:29:3.45%:45:5E-1:49:28:16:12:29 0/0:0:0:0:0:20:0%:36:1E0:47:20:12:8:20 0/0:0:0:0:0:25:0%:48:1E0:49:25:14:11:25 0/0:0:0:0:0:41:0%:78:1E0:41:41:29:12:43 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:21 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:34 0/0:0:0:0:0:30:0%:55:1E0:41:30:22:8:31 0/0:0:0:0:0:25:0%:48:1E0:40:25:16:9:25 0/0:37:1:1:0:32:3.12%:48:5E-1:43:31:16:15:32 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:29:0%:55:1E0:42:29:21:8:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:31 0/0:0:0:0:0:33:0%:63:1E0:39:33:22:11:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:20:6:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:11:12:23 0/0:0:0:0:0:33:0%:63:1E0:45:33:22:11:33 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:46:33:22:11:33 0/0:0:0:0:0:43:0%:82:1E0:40:43:26:17:43 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:52:0%:96:1E0:40:52:25:27:53 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:24 0/0:0:0:0:0:27:0%:52:1E0:39:27:12:15:28 0/0:0:0:0:0:38:0%:70:1E0:43:38:25:13:38 0/0:0:0:0:0:35:0%:67:1E0:39:35:25:10:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:28:13:41 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:39:33:17:16:33 0/0:0:0:0:0:44:0%:81:1E0:41:44:21:23:44 0/0:0:0:0:0:27:0%:52:1E0:38:27:19:8:27 0/0:0:0:0:0:17:0%:33:1E0:41:17:15:2:17 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:19:15:35 0/0:0:0:0:0:33:0%:63:1E0:41:33:21:12:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:29 0/0:0:0:0:0:34:0%:62:1E0:41:34:12:22:34 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:21 0/0:38:1:0:1:31:3.23%:48:5E-1:40:30:16:14:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:30 0/0:0:0:0:0:35:0%:67:1E0:37:35:21:14:36 0/0:0:0:0:0:39:0%:74:1E0:40:39:25:14:40 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:38:0%:70:1E0:41:38:22:16:40 0/0:32:1:0:1:24:4.17%:34:5E-1:42:23:15:8:26 0/0:0:0:0:0:50:0%:92:1E0:41:50:32:18:51 0/0:0:0:0:0:54:0%:99:1E0:42:54:29:25:54 0/0:30:1:1:0:31:3.23%:48:5E-1:43:30:16:14:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:16:6:24 0/0:0:0:0:0:41:0%:78:1E0:39:41:27:14:42 0/0:0:0:0:0:44:0%:81:1E0:39:44:26:18:46 0/0:0:0:0:0:50:0%:92:1E0:39:50:22:28:54 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:36 0/0:33:1:1:0:37:2.7%:59:5E-1:40:36:27:9:37 0/0:0:0:0:0:35:0%:67:1E0:40:35:24:11:37 0/0:38:1:1:0:47:2.13%:77:5E-1:40:46:26:20:50 0/0:0:0:0:0:28:0%:51:1E0:37:28:17:11:30 0/0:0:0:0:0:40:0%:74:1E0:38:40:21:19:41 0/0:0:0:0:0:28:0%:51:1E0:39:28:15:13:28 0/0:0:0:0:0:37:0%:70:1E0:38:37:24:13:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:21:17:39 0/0:0:0:0:0:48:0%:89:1E0:38:48:33:15:49 0/0:0:0:0:0:48:0%:89:1E0:41:48:31:17:50 0/0:0:0:0:0:43:0%:82:1E0:40:43:25:18:44 0/0:0:0:0:0:42:0%:77:1E0:40:42:23:19:46 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:40 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:37:0%:70:1E0:38:37:20:17:37 0/0:0:0:0:0:23:0%:44:1E0:42:23:17:6:23 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:21:20:41 0/0:60:1:1:0:46:2.17%:73:5E-1:38:45:31:14:46 0/0:0:0:0:0:44:0%:81:1E0:38:44:30:14:44 MTB_anc 4251297 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|fadE35_Rv3797|gene3879|transcript|Transcript_gene3879|Coding|1/1|c.213C>G|p.Gly71Gly|213/1782|213/1782|71/593||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4251297C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4251297C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:49:31:18:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:26:13:13:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:31:18:13:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:38:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:49:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:27:11:16:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:32:17:15:33:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:15:13:29:96.55%:99:9.9776E-16:60:1:0:1:30 1/1:43:23:12:11:24:95.83%:99:1.2146E-13:0:0:0:0:24 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:45:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:41:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:27:12:15:40:100%:99:5.1363E-16:0:0:0:0:40 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:26 1/1:49:29:17:12:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:16:15:32:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:31:20:11:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:40:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:50:24:26:51:98.04%:99:9.9117E-30:0:0:0:0:53 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:37:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:31:17:14:32:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:25:16:9:26:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:43:30:16:14:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:38:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:37:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:33:26:7:34:100%:99:1.3852E-19:0:0:0:0:37 1/1:40:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:47:27:20:48:100%:99:6.1512E-28:0:0:0:0:49 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:39:20:19:40:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:48:34:14:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:47:31:16:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:44:24:20:45:97.78%:99:3.8097E-26:0:0:0:0:46 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:45:31:14:46:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:44:30:14:44:100%:99:3.8097E-26:0:0:0:0:44 MTB_anc 4254078 . T C . PASS AC=167;AF=0.994;AN=168;ANN=C|synonymous_variant|LOW|Rv3798_Rv3798|gene3880|transcript|Transcript_gene3880|Coding|1/1|c.1086T>C|p.Arg362Arg|1086/1335|1086/1335|362/444||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4254078T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.4254078T>C||||||;WT=0;set=variant-filterI-filterI-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:7:0:7:100%:35:2.9138E-4:0:0:0:0:8 1/1:37:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:3:4:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:8:8:0:8:100%:41:7.77E-5:0:0:0:0:8 1/1:37:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:36:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:14:14:0:14:100%:76:2.4927E-8:0:0:0:0:14 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:38:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:36:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 1/1:37:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 0/1:36:7:3:4:8:87.5%:35:2.9138E-4:0:0:0:0:8 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:34:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:10:8:2:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:8:5:3:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:35:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:34:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:21:20:1:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:11:0:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:37:7:4:3:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 1/1:37:9:9:0:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:36:12:10:2:12:100%:64:3.698E-7:0:0:0:0:13 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:11:9:2:11:100%:58:1.4176E-6:0:0:0:0:11 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:36:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:9:8:1:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:35:9:7:2:9:100%:46:2.0568E-5:0:0:0:0:10 1/1:37:18:16:2:18:100%:99:1.1019E-10:0:0:0:0:18 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:35:7:6:1:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:37:8:6:2:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:13:11:2:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:7:5:2:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:37:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:17:14:3:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:10:9:1:10:100%:52:5.4125E-6:0:0:0:0:10 MTB_anc 4254290 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv3798_Rv3798|gene3880|transcript|Transcript_gene3880|Coding|1/1|c.1298T>G|p.Leu433Arg|1298/1335|1298/1335|433/444||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4254290T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|insertion_seqs_and_phages|||n.4254290T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:13:8:5:14:92.86%:64:3.7391E-7:39:1:0:1:14 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:13:12:26:96.15%:99:5.4444E-14:39:1:1:0:27 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:41:21:20:42:97.62%:99:2.3541E-24:0:0:0:0:43 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:49:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:43:25:16:9:26:96.15%:99:5.4444E-14:39:1:1:0:27 1/1:42:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:17 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:12:13:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:24:10:14:25:96%:99:3.101E-14:0:0:0:0:25 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:38:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:26:12:14:27:96.3%:99:1.4382E-14:39:1:1:0:27 1/1:40:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:48:27:21:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 MTB_anc 4255198 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|accD4_Rv3799c|gene3881|transcript|Transcript_gene3881|Coding|1/1|c.751T>G|p.Ser251Ala|751/1569|751/1569|251/522||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4255198A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4255198A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:19:9:10:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:26:19:7:27:96.3%:99:1.4382E-14:37:1:1:0:27 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:38:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:23:10:13:24:95.83%:99:7.7525E-13:34:1:1:0:27 1/1:49:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:66:37:29:66:100%:99:2.6498E-39:0:0:0:0:71 1/1:47:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:57:17:40:57:100%:99:6.4572E-34:0:0:0:0:61 1/1:41:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:49:32:17:49:100%:99:3.925E-29:0:0:0:0:53 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:42:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:50:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:49:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:51:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:50:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:22:13:9:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:13:7:6:14:92.86%:70:9.6148E-8:0:0:0:0:15 1/1:48:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:43:25:15:10:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:32:17:15:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:36:25:10:15:26:96.15%:99:5.4444E-14:37:1:1:0:29 1/1:44:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:41:71:32:39:71:100%:99:2.6835E-42:0:0:0:0:74 1/1:42:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:35 1/1:40:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:47 1/1:39:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:37:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:30:16:14:31:96.77%:99:6.8754E-17:53:1:1:0:31 1/1:38:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:58 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:38:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:52 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 MTB_anc 4261499 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|fadD32_Rv3801c|gene3883|transcript|Transcript_gene3883|Coding|1/1|c.1568T>C|p.Val523Ala|1568/1914|1568/1914|523/637||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4261499A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4261499A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:51:25:26:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:28:10:18:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:60:28:32:60:100%:99:1.035E-35:0:0:0:0:60 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:69:25:44:69:100%:99:4.233E-41:0:0:0:0:71 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 4263279 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|fadD32_Rv3801c-clp6_Rv3802c|gene3883-gene3884|intergenic_region|gene3883-gene3884|||n.4263279G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:47:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:51:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:50:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:38:16:22:39:97.44%:99:1.4697E-21:48:1:0:1:39 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:51:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:50:28:22:51:98.04%:99:1.3013E-28:39:1:1:0:53 1/1:50:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:51:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:54:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:52:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:40:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:27 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:34:27:7:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:28:12:16:29:96.55%:99:9.9776E-16:60:1:0:1:29 1/1:52:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:45:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:48:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:43:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 MTB_anc 4264230 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|clp6_Rv3802c|gene3884|transcript|Transcript_gene3884|Coding|1/1|c.136G>C|p.Val46Leu|136/1011|136/1011|46/336||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4264230C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4264230C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:50:36:14:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:36:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:31:17:14:32:96.88%:99:1.8007E-17:38:1:0:1:32 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:36:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:14:12:2:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:36:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:21:18:3:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:36:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:63:40:23:64:98.44%:99:1.657E-37:0:0:0:0:64 1/1:38:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:36:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:37:28:9:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:44:24:20:46:95.65%:99:3.8097E-26:0:0:0:0:46 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:38:28:10:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:38:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:36:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:35:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:36:24:15:9:25:100%:99:3.101E-14:0:0:0:0:26 1/1:35:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:37:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:37:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:56:37:19:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:37:47:33:14:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:36:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:35:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:36:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:35:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:36:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:37:42:31:11:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:38:24:19:5:24:100%:99:3.101E-14:0:0:0:0:28 1/1:36:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:29:19:10:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:39:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:36:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:29:22:7:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:36:15:13:2:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:38:25:13:39:97.44%:99:1.4697E-21:38:1:1:0:40 1/1:37:37:30:7:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:36:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:37 MTB_anc 4266799 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|intergenic_region|MODIFIER|fbpA_Rv3804c-aftB_Rv3805c|gene3886-gene3887|intergenic_region|gene3886-gene3887|||n.4266799G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:45:0%:85:1E0:42:45:22:23:45 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:26 0/0:0:0:0:0:61:0%:99:1E0:45:61:35:26:63 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:28 0/0:0:0:0:0:33:0%:63:1E0:50:33:17:16:33 0/0:0:0:0:0:19:0%:37:1E0:42:19:12:7:19 0/0:0:0:0:0:29:0%:55:1E0:51:29:15:14:30 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:40 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:48 0/0:0:0:0:0:23:0%:44:1E0:50:23:16:7:23 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:50 0/0:0:0:0:0:23:0%:44:1E0:46:23:7:16:23 0/0:0:0:0:0:29:0%:55:1E0:42:29:12:17:30 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:14:14:29 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:27 0/0:0:0:0:0:21:0%:40:1E0:49:21:14:7:21 0/0:0:0:0:0:23:0%:44:1E0:42:23:16:7:23 0/0:0:0:0:0:44:0%:81:1E0:42:44:18:26:45 0/0:0:0:0:0:30:0%:55:1E0:49:30:17:13:30 0/0:0:0:0:0:40:0%:74:1E0:48:40:22:18:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:18:15:33 0/0:0:0:0:0:34:0%:62:1E0:48:34:18:16:34 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:30 0/0:0:0:0:0:24:0%:44:1E0:46:24:9:15:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:37:0%:70:1E0:43:37:14:23:37 0/0:0:0:0:0:42:0%:77:1E0:45:42:17:25:42 0/0:0:0:0:0:43:0%:82:1E0:48:43:29:14:43 0/0:0:0:0:0:29:0%:55:1E0:45:29:8:21:29 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:45:0%:85:1E0:44:45:17:28:46 0/0:0:0:0:0:46:0%:85:1E0:44:46:17:29:46 0/0:0:0:0:0:46:0%:85:1E0:46:46:20:26:48 0/0:52:1:0:1:45:2.22%:73:5E-1:45:44:20:24:46 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 0/0:60:1:1:0:37:2.7%:59:5E-1:45:36:25:11:37 0/0:0:0:0:0:24:0%:44:1E0:46:24:13:11:25 0/0:0:0:0:0:13:0%:25:1E0:51:13:6:7:13 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 0/0:0:0:0:0:39:0%:74:1E0:45:39:17:22:39 0/0:38:1:1:0:41:2.44%:66:5E-1:47:40:19:21:43 0/0:0:0:0:0:19:0%:37:1E0:46:19:10:9:20 0/0:60:1:1:0:34:2.94%:51:5E-1:41:33:19:14:36 0/0:39:1:1:0:24:4.17%:34:5E-1:50:23:13:10:24 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:35 0/0:0:0:0:0:29:0%:55:1E0:42:29:17:12:29 0/0:0:0:0:0:56:0%:99:1E0:44:56:30:26:57 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:21 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:32:0%:59:1E0:47:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:46:36:16:20:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:36 0/0:0:0:0:0:30:0%:55:1E0:48:30:14:16:30 0/0:0:0:0:0:37:0%:70:1E0:48:37:19:18:37 0/0:37:1:1:0:59:1.69%:98:5E-1:44:58:28:30:59 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:44:0%:81:1E0:45:44:23:21:44 0/0:60:1:1:0:18:5.56%:24:5E-1:45:17:6:11:18 0/0:0:0:0:0:31:0%:59:1E0:50:31:17:14:31 0/0:0:0:0:0:22:0%:40:1E0:46:22:15:7:23 0/0:0:0:0:0:28:0%:51:1E0:51:28:18:10:28 0/0:0:0:0:0:16:0%:29:1E0:53:16:8:8:16 0/0:0:0:0:0:39:0%:74:1E0:50:39:21:18:39 0/0:0:0:0:0:38:0%:70:1E0:40:38:17:21:38 0/0:0:0:0:0:29:0%:55:1E0:49:29:18:11:29 0/0:0:0:0:0:19:0%:37:1E0:40:19:7:12:20 0/0:0:0:0:0:27:0%:52:1E0:50:27:10:17:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:29 0/0:0:0:0:0:34:0%:62:1E0:49:34:16:18:36 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:47 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:32:0%:59:1E0:49:32:11:21:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:20:16:36 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:60:1:1:0:30:3.33%:44:5E-1:42:29:9:20:30 0/0:0:0:0:0:22:0%:40:1E0:48:22:9:13:23 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/1:57:8:6:2:29:27.59%:26:2.2392E-3:50:21:7:14:29 0/0:39:1:1:0:34:2.94%:51:5E-1:48:33:17:16:34 0/0:0:0:0:0:25:0%:48:1E0:48:25:13:12:25 0/0:0:0:0:0:50:0%:92:1E0:41:50:25:25:50 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:26 0/0:0:0:0:0:55:0%:99:1E0:43:55:27:28:57 0/0:0:0:0:0:27:0%:52:1E0:41:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:36 0/0:0:0:0:0:37:0%:70:1E0:45:37:22:15:37 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:31:0%:59:1E0:44:31:11:20:31 0/0:0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:31 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:30 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:28 0/0:0:0:0:0:25:0%:48:1E0:46:25:14:11:25 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:20:14:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:11:23:34 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:38 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:25 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:21 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:39:0%:74:1E0:38:39:21:18:42 0/0:0:0:0:0:36:0%:66:1E0:43:36:15:21:36 0/0:0:0:0:0:37:0%:70:1E0:49:37:20:17:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:26 0/0:0:0:0:0:56:0%:99:1E0:43:56:24:32:57 0/0:0:0:0:0:65:0%:99:1E0:41:65:29:36:65 0/0:0:0:0:0:32:0%:59:1E0:43:32:17:15:33 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:47:0%:89:1E0:42:47:28:19:47 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:39 0/0:0:0:0:0:42:0%:77:1E0:39:42:21:21:43 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:38 0/0:0:0:0:0:39:0%:74:1E0:43:39:14:25:40 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:40 0/0:0:0:0:0:41:0%:78:1E0:41:41:21:20:44 0/0:37:1:1:0:42:2.38%:66:5E-1:41:41:22:19:43 0/0:0:0:0:0:55:0%:99:1E0:42:55:30:25:57 0/0:0:0:0:0:28:0%:51:1E0:41:28:9:19:28 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:42:0%:77:1E0:42:42:19:23:42 0/0:0:0:0:0:65:0%:99:1E0:38:65:30:35:65 0/0:0:0:0:0:49:0%:93:1E0:44:49:25:24:49 0/0:0:0:0:0:41:0%:78:1E0:43:41:24:17:41 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:21:12:33 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 0/0:0:0:0:0:32:0%:59:1E0:41:32:19:13:32 0/0:0:0:0:0:46:0%:85:1E0:46:46:19:27:47 0/0:0:0:0:0:36:0%:66:1E0:40:36:14:22:36 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:32 0/0:0:0:0:0:44:0%:81:1E0:42:44:20:24:45 0/0:0:0:0:0:39:0%:74:1E0:40:39:17:22:39 0/0:0:0:0:0:60:0%:99:1E0:44:60:31:29:60 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:36 MTB_anc 4269387 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|ubiA_Rv3806c|gene3888|transcript|Transcript_gene3888|Coding|1/1|c.447C>A|p.Asp149Glu|447/909|447/909|149/302||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4269387G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4269387G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|ethambutol|||n.4269387G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:49:32:17:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:52:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:53:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:63:40:23:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:48:30:18:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:62:36:26:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:48:20:28:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:59:36:23:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:27:23:4:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:49:32:17:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 MTB_anc 4269606 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|ubiA_Rv3806c|gene3888|transcript|Transcript_gene3888|Coding|1/1|c.228C>T|p.Arg76Arg|228/909|228/909|76/302||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4269606G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4269606G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|ethambutol|||n.4269606G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:46:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:50:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:60:26:34:60:100%:99:1.035E-35:0:0:0:0:60 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:50:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:31:8:23:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:42:10:32:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:37:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:40:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:59 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:41:17:24:42:97.62%:99:2.3541E-24:0:0:0:0:44 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:58:18:40:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:46 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:40:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:47 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:49:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 4275102 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|csp_Rv3811|gene3893|transcript|Transcript_gene3893|Coding|1/1|c.305T>C|p.Leu102Pro|305/1620|305/1620|102/539||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4275102T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4275102T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:20:15:5:22:90.91%:99:7.2544E-12:0:0:0:0:22 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:23:14:9:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:56:34:22:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:21:12:9:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:20:7:13:21:95.24%:99:4.0873E-11:37:1:0:1:21 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:35:22:13:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:46:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:19:10:9:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:43:17:15:2:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:26:14:12:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:42:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:49:34:15:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:34:27:7:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:37:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:39:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:33:20:13:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:39:48:32:16:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:41:25:16:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:40:40:29:11:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:39:30:9:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:19:9:10:20:95%:98:1.5234E-10:39:1:0:1:21 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 4277509 . GC GCC,G . PASS AC=46,1;AF=0.153,3.333e-03;AN=300;LOF=(PE_PGRS62_Rv3812|gene3894|1|1.00);NC=0;set GT:ABQ:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:47:0%:89:1E0:44:47:23:24:49 0/0:0:0:0:20:0%:36:1E0:49:20:10:10:20 0/0:0:0:0:57:0%:99:1E0:45:57:25:32:57 0/0:0:0:0:36:0%:66:1E0:47:36:17:19:36 1/1:42:6:16:23:91.67%:99:1.0078E-11:33:2:2:0:24 1/1:44:14:11:26:96.15%:99:5.4444E-14:37:1:0:1:26 0/0:0:0:0:33:0%:63:1E0:50:33:20:13:33 0/0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:40:0%:74:1E0:47:40:17:23:41 0/0:0:0:0:30:0%:55:1E0:48:30:15:15:30 0/1:50:14:18:36:88.89%:99:2.0653E-16:46:4:2:2:36 0/0:0:0:0:44:0%:81:1E0:42:44:23:21:46 0/0:0:0:0:32:0%:59:1E0:48:32:18:14:32 0/0:0:0:0:48:0%:89:1E0:46:48:26:22:49 0/0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:0:0:0:43:0%:82:1E0:44:43:24:19:44 0/0:0:0:0:29:0%:55:1E0:44:29:15:14:30 0/0:0:0:0:21:0%:40:1E0:43:21:15:6:21 1/1:43:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 0/0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:29:0%:55:1E0:46:29:13:16:31 0/0:0:0:0:59:0%:99:1E0:44:59:26:33:59 0/0:0:0:0:40:0%:74:1E0:45:40:21:19:40 0/0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:22:0%:40:1E0:43:22:13:9:22 0/1:46:13:9:27:81.48%:99:1.0343E-10:44:5:3:2:27 0/0:0:0:0:25:0%:48:1E0:42:25:17:8:25 1/1:43:14:13:28:96.43%:99:3.7915E-15:31:1:0:1:28 0/0:0:0:0:30:0%:55:1E0:44:30:14:16:30 1/1:40:22:10:33:94.12%:99:2.2142E-17:33:2:1:1:34 0/0:0:0:0:22:0%:40:1E0:44:22:9:13:22 0/0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:43:0%:82:1E0:51:43:25:18:43 0/0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:42:0%:77:1E0:45:42:21:21:42 0/0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:31:0%:59:1E0:42:31:20:11:31 0/0:0:0:0:55:0%:99:1E0:47:55:28:27:56 0/0:0:0:0:41:0%:78:1E0:47:41:21:20:42 0/0:0:0:0:47:0%:89:1E0:46:47:30:17:47 0/0:0:0:0:31:0%:59:1E0:42:31:13:18:31 0/0:0:0:0:46:0%:85:1E0:46:46:23:23:46 0/0:0:0:0:20:0%:36:1E0:48:20:10:10:20 0/0:0:0:0:16:0%:29:1E0:43:16:10:6:17 1/1:46:15:7:24:91.67%:99:1.0078E-11:47:2:0:2:24 0/0:0:0:0:29:0%:55:1E0:43:29:17:12:30 0/0:0:0:0:22:0%:40:1E0:46:22:10:12:22 0/0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:44:0%:81:1E0:47:44:15:29:45 0/0:0:0:0:22:0%:40:1E0:48:22:14:8:22 0/0:0:0:0:31:0%:59:1E0:47:31:19:12:31 0/0:0:0:0:25:0%:48:1E0:43:25:10:15:26 0/0:24:0:1:38:2.63%:58:5E-1:45:37:20:17:39 0/0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:34:0%:62:1E0:43:34:14:20:35 0/0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:25:0%:48:1E0:46:25:15:10:25 0/0:0:0:0:31:0%:59:1E0:48:31:9:22:31 0/0:0:0:0:46:0%:85:1E0:46:46:24:22:46 0/0:0:0:0:36:0%:66:1E0:39:36:19:17:36 0/0:0:0:0:29:0%:55:1E0:48:29:9:20:29 0/0:0:0:0:34:0%:62:1E0:48:34:15:19:35 0/0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:55:0%:99:1E0:46:55:29:26:56 0/0:0:0:0:63:0%:99:1E0:45:63:37:26:63 0/0:33:1:0:22:4.55%:31:5E-1:48:21:12:9:22 0/0:0:0:0:35:0%:67:1E0:47:35:15:20:35 0/0:0:0:0:15:0%:29:1E0:44:15:10:5:15 0/0:0:0:0:34:0%:62:1E0:47:34:22:12:34 0/0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/2:51:15:14:35:82.86%:99:4.008E-14:48:6:3:3:35 0/0:0:0:0:14:0%:25:1E0:51:14:10:4:14 1/1:49:17:16:36:91.67%:99:2.0653E-17:60:3:2:1:36 0/1:39:10:18:31:87.5%:99:3.2142E-14:40:4:0:4:32 0/0:0:0:0:30:0%:55:1E0:45:30:14:16:30 0/0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:34:0%:62:1E0:49:34:17:17:34 0/0:0:0:0:23:0%:44:1E0:42:23:17:6:23 0/0:0:0:0:27:0%:52:1E0:43:27:9:18:27 0/0:37:1:0:29:3.45%:45:5E-1:42:28:18:10:29 1/1:44:12:18:31:96.77%:99:6.8754E-17:33:1:1:0:31 0/0:0:0:0:30:0%:55:1E0:42:30:14:16:30 0/0:0:0:0:25:0%:48:1E0:49:25:14:11:26 0/1:41:11:9:22:86.96%:95:3.1579E-10:41:3:1:2:23 0/0:0:0:0:25:0%:48:1E0:40:25:19:6:25 0/0:0:0:0:30:0%:55:1E0:46:30:15:15:30 0/0:0:0:0:31:0%:59:1E0:45:31:12:19:32 0/0:0:0:0:42:0%:77:1E0:46:42:22:20:42 0/0:0:0:0:27:0%:52:1E0:49:27:14:13:28 1/1:45:18:14:33:96.97%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:23:0%:44:1E0:47:23:13:10:23 0/0:0:0:0:38:0%:70:1E0:42:38:27:11:38 0/0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:36:0%:66:1E0:46:36:13:23:36 0/0:0:0:0:34:0%:62:1E0:46:34:17:17:34 0/0:0:0:0:36:0%:66:1E0:40:36:23:13:36 0/0:0:0:0:40:0%:74:1E0:40:40:20:20:42 1/1:43:16:19:36:92.11%:99:4.2437E-19:31:2:1:1:37 0/0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:31:0%:59:1E0:49:31:14:17:32 0/0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:27:0%:52:1E0:45:27:13:14:27 0/0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:22:0%:40:1E0:47:22:8:14:22 0/0:0:0:0:40:0%:74:1E0:44:40:23:17:40 0/0:0:0:0:43:0%:82:1E0:41:43:25:18:43 0/0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:37:0%:70:1E0:42:37:14:23:38 0/0:0:0:0:40:0%:74:1E0:43:40:19:21:40 0/0:0:0:0:26:0%:47:1E0:40:26:14:12:26 0/0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:32:0%:59:1E0:42:32:14:18:32 0/0:0:0:0:36:0%:66:1E0:44:36:10:26:37 0/0:0:0:0:45:0%:85:1E0:39:45:24:21:45 0/0:0:0:0:44:0%:81:1E0:43:44:25:19:45 1/1:41:16:25:40:97.62%:99:2.5612E-23:50:1:0:1:42 0/0:0:0:0:31:0%:59:1E0:41:31:15:16:33 0/0:0:0:0:52:0%:96:1E0:41:52:33:19:54 1/1:42:23:18:43:95.35%:99:1.4915E-22:46:2:0:2:43 0/0:0:0:0:30:0%:55:1E0:43:30:13:17:30 0/0:0:0:0:29:0%:55:1E0:42:29:15:14:29 1/1:40:24:18:42:97.67%:99:6.6289E-24:35:1:1:0:43 0/0:0:0:0:46:0%:85:1E0:40:46:29:17:46 0/0:60:0:1:49:2.04%:80:5E-1:41:48:25:23:50 0/0:0:0:0:35:0%:67:1E0:40:35:11:24:37 0/0:0:0:0:47:0%:89:1E0:38:47:27:20:47 0/0:0:0:0:36:0%:66:1E0:38:36:15:21:36 0/0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:28:0%:51:1E0:41:28:12:16:29 1/1:39:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:26:0%:47:1E0:40:26:11:15:28 1/1:41:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:30:0%:55:1E0:42:30:14:16:32 1/1:44:14:11:27:92.59%:99:2.0853E-13:36:2:1:1:27 0/0:0:0:0:52:0%:96:1E0:39:52:24:28:52 0/0:0:0:0:36:0%:66:1E0:42:36:25:11:37 0/0:0:0:0:38:0%:70:1E0:41:38:21:17:38 1/1:41:14:23:40:90.24%:99:3.5075E-19:49:4:0:4:41 1/1:43:12:17:32:90.62%:99:3.5714E-15:34:3:2:1:32 0/0:0:0:0:37:0%:70:1E0:43:37:16:21:37 1/1:43:18:19:38:94.87%:99:3.0128E-20:46:2:1:1:39 0/0:0:0:0:35:0%:67:1E0:44:35:17:18:36 0/0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:0:0:0:31:0%:59:1E0:42:31:19:12:31 1/1:42:25:15:42:95.24%:99:5.6346E-22:36:2:1:1:42 1/1:48:21:13:36:94.44%:99:1.5887E-18:35:2:2:0:36 0/0:0:0:0:59:0%:99:1E0:41:59:30:29:60 0/0:0:0:0:38:0%:70:1E0:43:38:15:23:39 MTB_anc 4279710 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv3814c_Rv3814c|gene3896|transcript|Transcript_gene3896|Coding|1/1|c.306A>C|p.Ala102Ala|306/786|306/786|102/261||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4279710T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4279710T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:53:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:51:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:51:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:34:18:16:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:50:22:28:51:98.04%:99:1.3013E-28:38:1:1:0:52 1/1:48:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:52:30:22:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:51:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:61:27:34:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:60:28:32:60:100%:99:1.035E-35:0:0:0:0:62 1/1:43:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:40:20:20:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:46:17:29:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:58:30:28:59:98.31%:99:2.4634E-33:37:1:1:0:59 1/1:41:66:28:38:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:61:26:35:61:100%:99:2.609E-36:0:0:0:0:62 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:37:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:73:34:39:73:100%:99:1.7006E-43:0:0:0:0:74 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:51:25:26:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:42:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 MTB_anc 4282948 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|missense_variant|MODERATE|Rv3818_Rv3818|gene3900|transcript|Transcript_gene3900|Coding|1/1|c.500G>A|p.Gly167Asp|500/1551|500/1551|167/516||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4282948G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4282948G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:48:0%:89:1E0:46:48:26:22:48 0/0:0:0:0:0:23:0%:44:1E0:46:23:11:12:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:39 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:34 0/0:0:0:0:0:31:0%:59:1E0:47:31:20:11:32 0/0:0:0:0:0:33:0%:63:1E0:45:33:17:16:33 0/0:0:0:0:0:24:0%:44:1E0:48:24:13:11:26 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:40:0%:74:1E0:46:40:25:15:40 0/0:0:0:0:0:40:0%:74:1E0:47:40:22:18:41 0/0:0:0:0:0:28:0%:51:1E0:42:28:8:20:28 0/0:0:0:0:0:61:0%:99:1E0:45:61:36:25:61 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 0/0:0:0:0:0:58:0%:99:1E0:44:58:29:29:61 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:31 0/0:0:0:0:0:34:0%:62:1E0:47:34:21:13:35 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:46:31:15:16:31 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:37 0/0:0:0:0:0:53:0%:99:1E0:42:53:26:27:54 0/0:0:0:0:0:21:0%:40:1E0:47:21:10:11:22 0/0:0:0:0:0:21:0%:40:1E0:47:21:9:12:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:27:0%:52:1E0:48:27:13:14:28 0/0:0:0:0:0:20:0%:36:1E0:45:20:6:14:20 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:13:13:26 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:48:0%:89:1E0:47:48:25:23:48 0/0:0:0:0:0:35:0%:67:1E0:45:35:16:19:36 0/0:0:0:0:0:58:0%:99:1E0:44:58:36:22:59 0/0:0:0:0:0:40:0%:74:1E0:40:40:20:20:41 0/0:0:0:0:0:42:0%:77:1E0:44:42:25:17:42 0/0:0:0:0:0:34:0%:62:1E0:39:34:22:12:34 0/0:0:0:0:0:18:0%:32:1E0:41:18:10:8:19 0/0:0:0:0:0:32:0%:59:1E0:44:32:19:13:32 0/0:0:0:0:0:44:0%:81:1E0:43:44:28:16:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:52:0%:96:1E0:42:52:28:24:52 0/0:0:0:0:0:43:0%:82:1E0:42:43:24:19:43 0/0:0:0:0:0:37:0%:70:1E0:45:37:12:25:37 0/0:0:0:0:0:22:0%:40:1E0:46:22:10:12:23 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:21 0/0:0:0:0:0:35:0%:67:1E0:46:35:18:17:36 0/0:0:0:0:0:23:0%:44:1E0:48:23:9:14:23 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:50:0%:92:1E0:42:50:26:24:50 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:27 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:36 0/0:0:0:0:0:42:0%:77:1E0:47:42:24:18:42 0/0:0:0:0:0:37:0%:70:1E0:46:37:21:16:37 0/0:0:0:0:0:54:0%:99:1E0:46:54:27:27:55 0/0:0:0:0:0:55:0%:99:1E0:44:55:28:27:57 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:36:0%:66:1E0:48:36:17:19:36 0/0:0:0:0:0:42:0%:77:1E0:45:42:22:20:42 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:32:0%:59:1E0:43:32:16:16:32 0/0:0:0:0:0:17:0%:33:1E0:42:17:9:8:17 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:25 0/0:0:0:0:0:37:0%:70:1E0:45:37:14:23:37 0/0:0:0:0:0:29:0%:55:1E0:49:29:14:15:29 0/0:0:0:0:0:16:0%:29:1E0:47:16:10:6:16 0/0:0:0:0:0:40:0%:74:1E0:47:40:25:15:40 0/0:0:0:0:0:38:0%:70:1E0:44:38:17:21:38 0/0:0:0:0:0:23:0%:44:1E0:47:23:12:11:25 0/0:0:0:0:0:34:0%:62:1E0:38:34:17:17:34 0/0:0:0:0:0:36:0%:66:1E0:46:36:22:14:36 0/0:0:0:0:0:32:0%:59:1E0:42:32:11:21:32 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:44 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:22:0%:40:1E0:50:22:13:9:22 0/0:0:0:0:0:37:0%:70:1E0:45:37:19:18:37 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:32 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:40 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:24 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:26:0%:47:1E0:50:26:13:13:26 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:25:0%:48:1E0:47:25:15:10:25 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:45 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:34 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:38 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:32:0%:59:1E0:41:32:11:21:32 0/0:0:0:0:0:40:0%:74:1E0:41:40:16:24:40 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:32:0%:59:1E0:48:32:14:18:32 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:24:21:45 0/0:0:0:0:0:41:0%:78:1E0:44:41:26:15:41 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:32 0/0:0:0:0:0:43:0%:82:1E0:48:43:17:26:43 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:37 0/0:0:0:0:0:44:0%:81:1E0:41:44:17:27:44 0/0:0:0:0:0:37:0%:70:1E0:37:37:21:16:37 0/0:0:0:0:0:46:0%:85:1E0:44:46:23:23:47 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:34 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:60:0%:99:1E0:43:60:32:28:60 0/0:0:0:0:0:48:0%:89:1E0:42:48:27:21:48 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:60:1:0:1:33:3.03%:52:5E-1:42:32:20:12:33 0/0:0:0:0:0:47:0%:89:1E0:39:47:26:21:49 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:38 0/0:0:0:0:0:42:0%:77:1E0:44:42:19:23:42 0/0:0:0:0:0:44:0%:81:1E0:38:44:21:23:46 0/0:0:0:0:0:40:0%:74:1E0:38:40:19:21:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:13:19:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:40 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:36 0/0:0:0:0:0:39:0%:74:1E0:37:39:20:19:40 0/0:0:0:0:0:34:0%:62:1E0:43:34:15:19:35 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:44 0/0:0:0:0:0:36:0%:66:1E0:39:36:20:16:37 0/0:0:0:0:0:43:0%:82:1E0:43:43:16:27:44 0/0:0:0:0:0:58:0%:99:1E0:38:58:35:23:59 0/0:0:0:0:0:41:0%:78:1E0:44:41:24:17:41 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:47 0/0:0:0:0:0:51:0%:97:1E0:42:51:27:24:51 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:37 0/0:0:0:0:0:28:0%:51:1E0:45:28:14:14:28 0/0:0:0:0:0:52:0%:96:1E0:39:52:29:23:53 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:19:14:36 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:46:0%:85:1E0:44:46:24:22:46 0/0:0:0:0:0:56:0%:99:1E0:44:56:33:23:56 0/0:0:0:0:0:29:0%:55:1E0:43:29:21:8:30 MTB_anc 4284347 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv3819_Rv3819-papA2_Rv3820c|gene3901-gene3902|intergenic_region|gene3901-gene3902|||n.4284347C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:46:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:28:17:11:29:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:47:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:54:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:50:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:46:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:47:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:47:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:72:34:38:72:100%:99:6.7558E-43:0:0:0:0:75 1/1:44:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:60:29:31:60:100%:99:1.035E-35:0:0:0:0:64 1/1:41:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:61:26:35:61:100%:99:2.609E-36:0:0:0:0:62 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:39:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:36:15:21:37:97.3%:99:2.1762E-20:34:1:1:0:37 1/1:45:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:58:32:26:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 4284962 . G C . PASS AC=68;AF=0.227;AN=300;ANN=C|missense_variant|MODERATE|papA2_Rv3820c|gene3902|transcript|Transcript_gene3902|Coding|1/1|c.864C>G|p.Cys288Trp|864/1407|864/1407|288/468||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4284962G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4284962G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:46 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:18 0/0:0:0:0:0:48:0%:89:1E0:47:48:26:22:48 0/0:0:0:0:0:29:0%:55:1E0:40:29:15:14:29 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:28:0%:51:1E0:51:28:19:9:28 0/0:37:1:1:0:23:4.35%:34:5E-1:49:22:14:8:23 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:34 0/0:0:0:0:0:24:0%:44:1E0:47:24:10:14:25 1/1:47:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:55:0%:99:1E0:45:55:33:22:55 0/0:0:0:0:0:24:0%:44:1E0:49:24:7:17:24 0/0:0:0:0:0:58:0%:99:1E0:45:58:28:30:59 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:45:23:7:16:23 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:23 1/1:47:18:7:11:19:94.74%:92:5.6585E-10:60:1:0:1:19 0/0:0:0:0:0:36:0%:66:1E0:49:36:22:14:36 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:29 0/0:0:0:0:0:59:0%:99:1E0:43:59:30:29:59 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:27 0/0:0:0:0:0:41:0%:78:1E0:40:41:24:17:41 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:17:11:29 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:0:0:0:0:34:0%:62:1E0:44:34:12:22:34 1/1:41:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:39 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:47 0/0:0:0:0:0:26:0%:47:1E0:46:26:14:12:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:42 0/0:0:0:0:0:49:0%:93:1E0:49:49:21:28:49 0/0:60:1:0:1:45:2.22%:73:5E-1:47:44:25:19:46 0/0:38:1:1:0:39:2.56%:62:5E-1:44:38:19:19:39 0/0:0:0:0:0:24:0%:44:1E0:41:24:15:9:24 0/0:34:1:1:0:39:2.56%:62:5E-1:42:38:20:18:39 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 1/1:44:33:18:15:34:97.06%:99:1.2301E-18:38:1:0:1:34 0/0:0:0:0:0:49:0%:93:1E0:43:49:25:24:49 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:24 0/0:0:0:0:0:45:0%:85:1E0:40:45:24:21:45 0/0:0:0:0:0:36:0%:66:1E0:44:36:16:20:37 0/0:0:0:0:0:40:0%:74:1E0:48:40:22:18:40 0/0:0:0:0:0:26:0%:47:1E0:50:26:14:12:26 0/0:0:0:0:0:36:0%:66:1E0:45:36:19:17:36 0/0:0:0:0:0:18:0%:32:1E0:50:18:11:7:18 0/0:0:0:0:0:32:0%:59:1E0:45:32:20:12:32 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:39 0/0:0:0:0:0:48:0%:89:1E0:43:48:26:22:48 0/0:0:0:0:0:29:0%:55:1E0:46:29:18:11:29 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:31:0%:59:1E0:43:31:13:18:31 0/0:0:0:0:0:29:0%:55:1E0:52:29:15:14:29 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:48:0%:89:1E0:43:48:28:20:50 1/1:49:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:30:23:7:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:19:0%:37:1E0:51:19:10:9:19 0/0:0:0:0:0:17:0%:33:1E0:50:17:9:8:17 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 1/1:51:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 0/0:0:0:0:0:22:0%:40:1E0:51:22:18:4:22 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:39 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:31:0%:59:1E0:46:31:12:19:31 0/0:0:0:0:0:33:0%:63:1E0:46:33:21:12:36 0/0:0:0:0:0:25:0%:48:1E0:46:25:12:13:25 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:30 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:41:0%:78:1E0:45:41:24:17:41 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 1/1:39:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:38 0/0:0:0:0:0:33:0%:63:1E0:43:33:17:16:33 0/0:0:0:0:0:12:0%:21:1E0:44:12:9:3:13 0/0:0:0:0:0:40:0%:74:1E0:47:40:23:17:41 0/0:60:1:1:0:24:4.17%:34:5E-1:46:23:13:10:24 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:25:0%:48:1E0:46:25:9:16:25 0/0:0:0:0:0:48:0%:89:1E0:42:48:32:16:49 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:35 0/0:0:0:0:0:40:0%:74:1E0:43:40:24:16:40 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:29 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:20:21:41 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:29:0%:55:1E0:48:29:18:11:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 1/1:42:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:14:15:32 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:23 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:35:0%:67:1E0:46:35:12:23:35 0/0:0:0:0:0:39:0%:74:1E0:45:39:22:17:39 0/0:0:0:0:0:44:0%:81:1E0:46:44:18:26:44 0/0:0:0:0:0:41:0%:78:1E0:47:41:23:18:42 0/0:0:0:0:0:31:0%:59:1E0:45:31:14:17:31 0/0:38:1:0:1:29:3.45%:45:5E-1:48:28:17:11:29 0/0:0:0:0:0:23:0%:44:1E0:40:23:14:9:23 0/0:0:0:0:0:30:0%:55:1E0:43:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:29 0/0:0:0:0:0:38:0%:70:1E0:39:38:17:21:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:24:22:48 1/1:44:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:41 0/0:0:0:0:0:24:0%:44:1E0:45:24:10:14:24 0/0:0:0:0:0:69:0%:99:1E0:43:69:38:31:69 1/1:42:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:55 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 1/1:39:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:58 0/0:0:0:0:0:39:0%:74:1E0:41:39:13:26:39 0/0:0:0:0:0:42:0%:77:1E0:42:42:21:21:42 0/0:0:0:0:0:46:0%:85:1E0:37:46:24:22:47 0/0:0:0:0:0:53:0%:99:1E0:42:53:28:25:54 0/0:0:0:0:0:29:0%:55:1E0:40:29:18:11:29 0/0:0:0:0:0:49:0%:93:1E0:40:49:28:21:50 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:39 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 0/0:0:0:0:0:39:0%:74:1E0:44:39:20:19:40 1/1:40:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 0/0:0:0:0:0:58:0%:99:1E0:39:58:30:28:58 0/0:0:0:0:0:47:0%:89:1E0:45:47:32:15:47 0/0:0:0:0:0:37:0%:70:1E0:39:37:17:20:38 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 1/1:41:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 0/0:0:0:0:0:34:0%:62:1E0:45:34:17:17:34 0/0:0:0:0:0:30:0%:55:1E0:39:30:17:13:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:8:18:26 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:37:16:21:38:100%:99:5.7269E-22:0:0:0:0:38 0/0:0:0:0:0:52:0%:96:1E0:43:52:26:26:53 0/0:0:0:0:0:34:0%:62:1E0:41:34:13:21:35 MTB_anc 4287164 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|Rv3822_Rv3822|gene3904|transcript|Transcript_gene3904|Coding|1/1|c.444G>A|p.Gly148Gly|444/1215|444/1215|148/404||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4287164G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4287164G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:52:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:70:41:29:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:49:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:51:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:51:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:55:22:33:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:48:32:16:16:33:96.97%:99:4.7095E-18:37:1:1:0:33 1/1:44:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:67:39:28:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:49:44:24:20:45:97.78%:99:4.4304E-25:60:1:1:0:45 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:15:4:11:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:48:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:49:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:49:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:46:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:67:31:36:67:100%:99:6.6743E-40:0:0:0:0:71 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:50 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:44 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:39:61:25:36:61:100%:99:2.609E-36:0:0:0:0:66 1/1:40:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:43:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:77:35:42:77:100%:99:6.8219E-46:0:0:0:0:77 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:31 MTB_anc 4287361 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3822_Rv3822|gene3904|transcript|Transcript_gene3904|Coding|1/1|c.641T>C|p.Val214Ala|641/1215|641/1215|214/404||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4287361T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4287361T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:58:25:33:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:61:35:26:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:38:18:20:39:97.44%:99:1.4697E-21:60:1:1:0:40 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:76:40:36:76:100%:99:2.711E-45:0:0:0:0:77 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:47:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:42:23:19:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:40:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:49:17:32:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:50:21:29:50:100%:99:9.9117E-30:0:0:0:0:53 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:38:63:33:30:63:100%:99:1.657E-37:0:0:0:0:66 1/1:46:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:61:38:23:61:100%:99:2.609E-36:0:0:0:0:62 1/1:43:39:19:20:40:97.5%:99:3.6742E-23:0:0:0:0:41 1/1:46:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:67 1/1:39:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 4287890 . G A . PASS AC=124;AF=0.413;AN=300;ANN=A|synonymous_variant|LOW|Rv3822_Rv3822|gene3904|transcript|Transcript_gene3904|Coding|1/1|c.1170G>A|p.Ala390Ala|1170/1215|1170/1215|390/404||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4287890G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4287890G>A||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:60:29:31:60:100%:99:1.035E-35:0:0:0:0:61 1/1:52:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:44 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:19:0%:37:1E0:41:19:6:13:19 0/0:0:0:0:0:29:0%:55:1E0:45:29:14:15:29 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 0/0:0:0:0:0:24:0%:44:1E0:46:24:11:13:24 1/1:47:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:30:0%:55:1E0:46:30:12:18:31 1/1:44:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:51:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:55:34:21:55:100%:99:1.0149E-32:0:0:0:0:56 0/0:0:0:0:0:29:0%:55:1E0:44:29:15:14:29 0/0:0:0:0:0:45:0%:85:1E0:46:45:20:25:45 1/1:48:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:22:0%:40:1E0:48:22:13:9:23 0/0:0:0:0:0:27:0%:52:1E0:48:27:8:19:28 0/0:0:0:0:0:40:0%:74:1E0:42:40:21:19:40 1/1:44:51:16:35:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:49:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:20:10:30 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:20:0%:36:1E0:51:20:6:14:20 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:26:0%:47:1E0:47:26:10:16:27 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:30:0%:55:1E0:48:30:13:17:31 1/1:42:32:17:15:33:96.97%:99:4.7095E-18:37:1:1:0:33 0/0:0:0:0:0:45:0%:85:1E0:47:45:19:26:45 1/1:47:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:61:30:31:61:100%:99:2.609E-36:0:0:0:0:61 0/0:0:0:0:0:42:0%:77:1E0:46:42:19:23:42 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:48:0%:89:1E0:41:48:12:36:48 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:45 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 0/0:0:0:0:0:44:0%:81:1E0:48:44:27:17:44 1/1:43:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:61:24:37:61:100%:99:2.609E-36:0:0:0:0:61 1/1:46:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 0/0:0:0:0:0:59:0%:99:1E0:42:59:30:29:59 1/1:44:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:32:0%:59:1E0:46:32:13:19:32 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:15:15:30 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:53 0/0:0:0:0:0:40:0%:74:1E0:43:40:16:24:42 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:44 0/0:0:0:0:0:62:0%:99:1E0:47:62:29:33:63 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:45:0%:85:1E0:48:45:24:21:45 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 0/0:0:0:0:0:36:0%:66:1E0:48:36:20:16:36 1/1:48:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:35:0%:67:1E0:51:35:21:14:35 0/0:0:0:0:0:51:0%:97:1E0:43:51:22:29:51 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:51:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:45 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 0/0:0:0:0:0:52:0%:96:1E0:43:52:29:23:53 1/1:46:49:21:28:49:100%:99:3.925E-29:0:0:0:0:49 0/0:0:0:0:0:38:0%:70:1E0:49:38:16:22:38 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:36 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:23 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:37:0%:70:1E0:47:37:16:21:37 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:46:0%:85:1E0:48:46:19:27:46 1/1:52:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:36 0/0:0:0:0:0:37:0%:70:1E0:43:37:22:15:37 0/0:0:0:0:0:38:0%:70:1E0:40:38:14:24:38 0/0:0:0:0:0:34:0%:62:1E0:41:34:14:20:34 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:35 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:26 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:31:0%:59:1E0:45:31:13:18:31 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:31 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:34 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:41 0/0:0:0:0:0:46:0%:85:1E0:43:46:15:31:46 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:37 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 0/0:0:0:0:0:39:0%:74:1E0:38:39:19:20:42 0/0:33:1:0:1:46:2.17%:73:5E-1:40:45:14:31:47 0/0:0:0:0:0:24:0%:44:1E0:39:24:15:9:24 0/0:0:0:0:0:36:0%:66:1E0:47:36:20:16:37 0/0:0:0:0:0:20:0%:36:1E0:43:20:10:10:20 0/0:0:0:0:0:62:0%:99:1E0:43:62:32:30:62 0/0:0:0:0:0:51:0%:97:1E0:42:51:21:30:51 0/0:39:1:0:1:18:5.56%:24:5E-1:39:17:8:9:18 0/0:0:0:0:0:23:0%:44:1E0:46:23:13:10:23 0/0:0:0:0:0:52:0%:96:1E0:40:52:22:30:52 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:42 0/0:0:0:0:0:47:0%:89:1E0:43:47:22:25:47 0/0:0:0:0:0:38:0%:70:1E0:37:38:18:20:39 0/0:0:0:0:0:50:0%:92:1E0:39:50:28:22:52 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:38 0/0:0:0:0:0:38:0%:70:1E0:42:38:16:22:40 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:17:22:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:16:21:37 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:29 0/0:0:0:0:0:29:0%:55:1E0:39:29:11:18:29 0/0:0:0:0:0:39:0%:74:1E0:44:39:18:21:39 1/1:40:74:33:41:74:100%:99:4.2804E-44:0:0:0:0:75 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:37:1:0:1:39:2.56%:62:5E-1:39:38:15:23:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:10:18:28 0/0:0:0:0:0:39:0%:74:1E0:42:39:15:24:40 0/0:0:0:0:0:52:0%:96:1E0:42:52:22:30:54 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:12:22:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:45 1/1:46:51:24:27:52:98.08%:99:3.3479E-29:36:1:0:1:53 1/1:43:49:18:31:49:100%:99:3.925E-29:0:0:0:0:49 MTB_anc 4289953 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|mmpL8_Rv3823c|gene3905|transcript|Transcript_gene3905|Coding|1/1|c.1577C>T|p.Ala526Val|1577/3270|1577/3270|526/1089||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4289953G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4289953G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:72:39:33:73:98.63%:99:1.2584E-41:24:1:1:0:75 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:42:28:12:16:29:96.55%:99:9.9776E-16:60:1:0:1:30 1/1:43:22:7:15:23:95.65%:99:4.7526E-13:0:0:0:0:23 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:50:48:28:20:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:39:36:11:25:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:52:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:50:34:11:23:35:97.14%:99:3.2089E-19:35:1:0:1:36 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:45:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:70:31:39:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:41:59:25:34:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:41:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:68:35:33:68:100%:99:1.6809E-40:0:0:0:0:70 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 MTB_anc 4290564 . T G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|mmpL8_Rv3823c|gene3905|transcript|Transcript_gene3905|Coding|1/1|c.966A>C|p.Ala322Ala|966/3270|966/3270|322/1089||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4290564T>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4290564T>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:70:35:35:70:100%:99:1.0659E-41:0:0:0:0:70 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:29:15:14:30:96.67%:99:2.6212E-16:60:1:0:1:31 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:62:38:24:63:98.41%:99:6.5755E-37:0:0:0:0:64 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:44:28:13:15:29:96.55%:99:9.9776E-16:38:1:1:0:30 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:49:21:28:49:100%:99:3.925E-29:0:0:0:0:52 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:21:11:10:22:95.45%:99:1.0931E-11:38:1:1:0:22 1/1:39:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:60:27:33:60:100%:99:1.035E-35:0:0:0:0:62 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:57:31:26:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:48:23:25:48:100%:99:1.554E-28:0:0:0:0:52 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:63:31:32:63:100%:99:1.657E-37:0:0:0:0:64 1/1:43:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:38:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:40:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:38:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:44:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:41:18:23:42:97.62%:99:2.5612E-23:30:1:0:1:43 1/1:40:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:38:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 MTB_anc 4290827 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|mmpL8_Rv3823c|gene3905|transcript|Transcript_gene3905|Coding|1/1|c.703C>G|p.Arg235Gly|703/3270|703/3270|235/1089||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4290827G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4290827G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:45:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:49:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:42:21:21:43:97.67%:99:5.9562E-25:0:0:0:0:44 1/1:49:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:24:13:11:25:96%:99:3.101E-14:0:0:0:0:26 1/1:45:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:52:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:21:13:35:97.14%:99:3.5146E-20:0:0:0:0:37 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:81:40:41:81:100%:99:2.7329E-48:0:0:0:0:81 1/1:48:58:31:27:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:26:12:14:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:31:13:18:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:49:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:27:13:14:28:96.43%:99:5.1363E-16:0:0:0:0:28 1/1:45:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:48:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:51:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:51:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:46:31:15:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:38:19:19:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:60:34:26:61:98.36%:99:1.6176E-34:33:1:1:0:62 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:14:14:29:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:67:30:37:67:100%:99:6.6743E-40:0:0:0:0:68 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:60 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:44:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:57:22:35:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:53:22:31:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:44:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:58:33:25:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:38:20:18:41:92.68%:99:1.4508E-22:0:0:0:0:42 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:68:36:32:68:100%:99:1.6809E-40:0:0:0:0:68 1/1:39:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 MTB_anc 4296240 . G C . PASS AC=4;AF=0.013;AN=300;ANN=C|synonymous_variant|LOW|pks2_Rv3825c|gene3907|transcript|Transcript_gene3907|Coding|1/1|c.3366C>G|p.Gly1122Gly|3366/6381|3366/6381|1122/2126||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4296240G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4296240G>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:52:0%:96:1E0:41:52:34:18:53 0/0:0:0:0:0:14:0%:25:1E0:48:14:10:4:14 0/0:0:0:0:0:50:0%:92:1E0:44:50:32:18:50 0/0:0:0:0:0:28:0%:51:1E0:42:28:9:19:28 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:31 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:39 0/0:60:1:1:0:32:3.12%:48:5E-1:47:31:19:12:32 0/0:0:0:0:0:19:0%:37:1E0:48:19:12:7:19 0/0:0:0:0:0:32:0%:59:1E0:49:32:20:12:33 0/0:0:0:0:0:37:0%:70:1E0:49:37:14:23:38 0/0:0:0:0:0:32:0%:59:1E0:42:32:12:20:33 0/0:0:0:0:0:42:0%:77:1E0:43:42:26:16:43 0/0:0:0:0:0:24:0%:44:1E0:47:24:12:12:24 0/0:0:0:0:0:56:0%:99:1E0:46:56:23:33:57 0/0:0:0:0:0:28:0%:51:1E0:46:28:19:9:29 0/0:0:0:0:0:41:0%:78:1E0:45:41:22:19:41 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:30 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:49:26:16:10:28 0/0:0:0:0:0:29:0%:55:1E0:48:29:15:14:29 0/0:0:0:0:0:29:0%:55:1E0:42:29:15:14:29 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:47 0/0:0:0:0:0:29:0%:55:1E0:51:29:18:11:29 0/0:0:0:0:0:40:0%:74:1E0:45:40:21:19:41 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:23 0/0:0:0:0:0:21:0%:40:1E0:46:21:15:6:21 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:15:20:35 0/0:0:0:0:0:27:0%:52:1E0:46:27:16:11:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:20:13:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:19:19:39 0/0:38:1:0:1:72:1.39%:99:5E-1:48:71:38:33:72 0/0:0:0:0:0:41:0%:78:1E0:44:41:20:21:42 0/0:0:0:0:0:49:0%:93:1E0:45:49:29:20:50 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:48:0%:89:1E0:44:48:24:24:48 0/0:0:0:0:0:25:0%:48:1E0:41:25:16:9:25 0/0:0:0:0:0:24:0%:44:1E0:49:24:8:16:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 0/0:0:0:0:0:19:0%:37:1E0:46:19:7:12:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:16:15:32 0/0:0:0:0:0:43:0%:82:1E0:44:43:23:20:43 0/0:0:0:0:0:39:0%:74:1E0:43:39:24:15:39 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:41 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:19:0%:37:1E0:51:19:13:6:19 0/0:0:0:0:0:39:0%:74:1E0:47:39:17:22:40 0/0:0:0:0:0:27:0%:52:1E0:42:27:13:14:27 0/0:0:0:0:0:51:0%:97:1E0:42:51:22:29:51 0/0:0:0:0:0:43:0%:82:1E0:42:43:18:25:43 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:36 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:51:0%:97:1E0:47:51:26:25:52 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:32 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:38 0/0:0:0:0:0:41:0%:78:1E0:42:41:20:21:41 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:37 0/0:0:0:0:0:56:0%:99:1E0:47:56:32:24:56 0/0:0:0:0:0:64:0%:99:1E0:44:64:38:26:64 0/0:0:0:0:0:33:0%:63:1E0:43:33:14:19:33 0/0:0:0:0:0:31:0%:59:1E0:48:31:15:16:31 0/0:0:0:0:0:15:0%:29:1E0:43:15:5:10:15 0/0:0:0:0:0:12:0%:21:1E0:47:12:3:9:12 0/0:0:0:0:0:32:0%:59:1E0:44:32:18:14:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:9:19:29 0/0:0:0:0:0:21:0%:40:1E0:49:21:12:9:21 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:34 0/0:0:0:0:0:44:0%:81:1E0:42:44:21:23:45 0/0:0:0:0:0:24:0%:44:1E0:42:24:10:14:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:20:12:32 0/0:0:0:0:0:34:0%:62:1E0:52:34:17:17:34 0/0:0:0:0:0:23:0%:44:1E0:46:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:44:30:16:14:30 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:35 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:44:0%:81:1E0:43:44:25:19:44 0/0:0:0:0:0:26:0%:47:1E0:51:26:13:13:26 0/0:0:0:0:0:18:0%:32:1E0:39:18:8:10:20 0/0:0:0:0:0:36:0%:66:1E0:41:36:15:21:37 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:20:0%:36:1E0:42:20:8:12:20 0/0:0:0:0:0:43:0%:82:1E0:51:43:24:19:43 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:29 0/0:0:0:0:0:33:0%:63:1E0:49:33:21:12:33 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:28 0/0:0:0:0:0:42:0%:77:1E0:42:42:24:18:42 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:42:0%:77:1E0:45:42:29:13:42 0/0:0:0:0:0:23:0%:44:1E0:44:23:15:8:23 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 0/0:0:0:0:0:33:0%:63:1E0:44:33:20:13:34 0/0:0:0:0:0:25:0%:48:1E0:48:25:14:11:25 0/0:0:0:0:0:46:0%:85:1E0:45:46:20:26:46 0/0:0:0:0:0:34:0%:62:1E0:44:34:21:13:36 0/0:0:0:0:0:34:0%:62:1E0:42:34:21:13:36 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:28:0%:51:1E0:44:28:16:12:28 0/0:0:0:0:0:31:0%:59:1E0:47:31:14:17:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:35:0%:67:1E0:47:35:19:16:35 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:38 0/0:0:0:0:0:27:0%:52:1E0:39:27:10:17:27 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:51:0%:97:1E0:42:51:28:23:53 0/0:0:0:0:0:49:0%:93:1E0:40:49:28:21:50 0/0:0:0:0:0:33:0%:63:1E0:39:33:13:20:33 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:35 0/0:0:0:0:0:33:0%:63:1E0:39:33:19:14:34 0/0:0:0:0:0:59:0%:99:1E0:42:59:38:21:60 0/0:0:0:0:0:57:0%:99:1E0:42:57:27:30:58 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:23:0%:44:1E0:42:23:14:9:23 0/0:0:0:0:0:47:0%:89:1E0:42:47:30:17:48 0/0:26:1:0:1:38:2.63%:58:5E-1:42:37:20:17:41 0/0:0:0:0:0:56:0%:99:1E0:43:56:38:18:56 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:43 0/0:0:0:0:0:51:0%:97:1E0:40:51:21:30:51 0/0:0:0:0:0:42:0%:77:1E0:38:42:16:26:42 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:37 0/0:0:0:0:0:46:0%:85:1E0:39:46:25:21:46 0/0:0:0:0:0:54:0%:99:1E0:42:54:32:22:54 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:36:0%:66:1E0:36:36:21:15:37 0/0:0:0:0:0:31:0%:59:1E0:40:31:16:15:31 0/0:0:0:0:0:35:0%:67:1E0:46:35:17:18:35 0/0:34:2:2:0:63:3.17%:95:2.48E-1:38:61:36:25:63 0/0:0:0:0:0:40:0%:74:1E0:41:40:27:13:40 0/0:0:0:0:0:39:0%:74:1E0:39:39:20:19:39 0/0:0:0:0:0:49:0%:93:1E0:44:49:28:21:50 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:41 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:33 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:35 0/0:0:0:0:0:31:0%:59:1E0:46:31:19:12:31 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:47:0%:89:1E0:42:47:25:22:49 0/0:0:0:0:0:55:0%:99:1E0:41:55:27:28:55 0/0:0:0:0:0:48:0%:89:1E0:40:48:24:24:50 MTB_anc 4301445 . C T . PASS AC=12;AF=0.040;AN=300;ANN=T|missense_variant|MODERATE|fadD23_Rv3826|gene3908|transcript|Transcript_gene3908|Coding|1/1|c.1634C>T|p.Ala545Val|1634/1755|1634/1755|545/584||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4301445C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|lipid_metabolism|||n.4301445C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:45 0/0:0:0:0:0:17:0%:33:1E0:52:17:5:12:17 0/0:0:0:0:0:52:0%:96:1E0:46:52:26:26:52 0/0:0:0:0:0:25:0%:48:1E0:49:25:15:10:26 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:33 0/0:0:0:0:0:35:0%:67:1E0:46:35:11:24:35 0/0:0:0:0:0:28:0%:51:1E0:47:28:8:20:28 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:19 0/0:0:0:0:0:27:0%:52:1E0:49:27:12:15:27 0/0:0:0:0:0:30:0%:55:1E0:52:30:14:16:30 0/0:0:0:0:0:56:0%:99:1E0:47:56:31:25:56 0/0:0:0:0:0:54:0%:99:1E0:44:54:26:28:54 0/0:0:0:0:0:22:0%:40:1E0:47:22:15:7:22 0/0:0:0:0:0:69:0%:99:1E0:45:69:38:31:69 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:29:0%:55:1E0:46:29:15:14:29 0/0:0:0:0:0:33:0%:63:1E0:46:33:20:13:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:14:18:32 0/0:0:0:0:0:27:0%:52:1E0:50:27:11:16:27 0/0:0:0:0:0:22:0%:40:1E0:45:22:15:7:22 0/0:0:0:0:0:47:0%:89:1E0:46:47:22:25:48 0/0:0:0:0:0:32:0%:59:1E0:48:32:15:17:32 0/0:0:0:0:0:54:0%:99:1E0:46:54:25:29:54 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:24 0/0:0:0:0:0:22:0%:40:1E0:45:22:10:12:22 0/0:0:0:0:0:18:0%:32:1E0:42:18:8:10:18 0/0:0:0:0:0:13:0%:25:1E0:47:13:9:4:13 0/0:0:0:0:0:29:0%:55:1E0:47:29:12:17:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:32:0%:59:1E0:48:32:21:11:32 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:25 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:15:16:31 0/0:0:0:0:0:44:0%:81:1E0:44:44:23:21:44 0/0:0:0:0:0:40:0%:74:1E0:44:40:23:17:41 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:65:0%:99:1E0:47:65:30:35:65 0/0:0:0:0:0:42:0%:77:1E0:48:42:19:23:42 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:48 0/0:0:0:0:0:42:0%:77:1E0:40:42:19:23:42 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:31 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:29 0/0:0:0:0:0:23:0%:44:1E0:50:23:9:14:23 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:43 0/0:38:1:0:1:20:5%:27:5E-1:50:19:9:10:20 0/0:0:0:0:0:31:0%:59:1E0:44:31:21:10:31 0/0:0:0:0:0:32:0%:59:1E0:49:32:16:16:32 0/0:0:0:0:0:32:0%:59:1E0:46:32:12:20:32 0/0:0:0:0:0:18:0%:32:1E0:42:18:11:7:18 0/0:0:0:0:0:53:0%:99:1E0:45:53:29:24:53 0/0:0:0:0:0:45:0%:85:1E0:44:45:26:19:46 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:35 0/0:0:0:0:0:52:0%:96:1E0:45:52:22:30:52 0/0:38:1:0:1:49:2.04%:80:5E-1:49:48:24:24:50 0/0:0:0:0:0:21:0%:40:1E0:51:21:8:13:21 0/0:37:1:0:1:38:2.63%:58:5E-1:44:37:18:19:38 0/0:0:0:0:0:50:0%:92:1E0:42:50:30:20:50 0/0:0:0:0:0:38:0%:70:1E0:47:38:16:22:38 0/0:0:0:0:0:36:0%:66:1E0:51:36:14:22:36 0/0:0:0:0:0:65:0%:99:1E0:45:65:35:30:66 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:40:0%:74:1E0:46:40:16:24:41 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:24:0%:44:1E0:50:24:13:11:24 0/0:0:0:0:0:44:0%:81:1E0:48:44:21:23:44 0/0:60:1:0:1:28:3.57%:41:5E-1:48:27:15:12:28 0/0:0:0:0:0:21:0%:40:1E0:51:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:51:25:8:17:25 0/0:0:0:0:0:28:0%:51:1E0:40:28:17:11:29 0/0:0:0:0:0:33:0%:63:1E0:49:33:20:13:33 0/0:0:0:0:0:40:0%:74:1E0:45:40:20:20:41 0/0:0:0:0:0:24:0%:44:1E0:52:24:8:16:24 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:0:0:0:0:26:0%:47:1E0:46:26:16:10:28 0/0:0:0:0:0:30:0%:55:1E0:46:30:14:16:31 0/0:0:0:0:0:42:0%:77:1E0:45:42:18:24:43 0/0:0:0:0:0:30:0%:55:1E0:44:30:12:18:30 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:23:0%:44:1E0:46:23:14:9:23 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:29:0%:55:1E0:50:29:17:12:29 0/0:0:0:0:0:18:0%:32:1E0:46:18:11:7:19 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:34 0/0:0:0:0:0:27:0%:52:1E0:49:27:16:11:27 0/0:0:0:0:0:57:0%:99:1E0:43:57:29:28:58 0/0:0:0:0:0:29:0%:55:1E0:47:29:19:10:29 0/0:0:0:0:0:60:0%:99:1E0:47:60:33:27:61 0/0:0:0:0:0:35:0%:67:1E0:44:35:15:20:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 0/0:0:0:0:0:40:0%:74:1E0:43:40:13:27:41 1/1:41:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:47:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:45 0/0:0:0:0:0:30:0%:55:1E0:41:30:12:18:32 0/0:0:0:0:0:18:0%:32:1E0:48:18:12:6:21 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:31 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:38:0%:70:1E0:45:38:23:15:38 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:40 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:34 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:41 0/0:0:0:0:0:45:0%:85:1E0:42:45:19:26:47 0/0:0:0:0:0:40:0%:74:1E0:43:40:21:19:41 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:37 0/0:0:0:0:0:44:0%:81:1E0:44:44:22:22:45 0/0:0:0:0:0:35:0%:67:1E0:41:35:18:17:35 0/0:0:0:0:0:64:0%:99:1E0:45:64:33:31:64 0/0:0:0:0:0:46:0%:85:1E0:42:46:22:24:46 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:68:0%:99:1E0:42:68:38:30:71 0/0:0:0:0:0:43:0%:82:1E0:39:43:20:23:44 0/0:0:0:0:0:64:0%:99:1E0:43:64:38:26:69 0/0:0:0:0:0:41:0%:78:1E0:38:41:22:19:44 0/0:0:0:0:0:59:0%:99:1E0:41:59:32:27:59 0/0:0:0:0:0:36:0%:66:1E0:42:36:14:22:38 0/0:0:0:0:0:37:0%:70:1E0:43:37:19:18:37 0/0:0:0:0:0:41:0%:78:1E0:43:41:20:21:42 0/0:0:0:0:0:49:0%:93:1E0:42:49:20:29:50 0/0:0:0:0:0:35:0%:67:1E0:41:35:20:15:35 0/0:0:0:0:0:53:0%:99:1E0:40:53:27:26:54 0/0:0:0:0:0:26:0%:47:1E0:38:26:14:12:27 0/0:0:0:0:0:49:0%:93:1E0:47:49:27:22:50 0/0:0:0:0:0:77:0%:99:1E0:40:77:33:44:78 0/0:0:0:0:0:44:0%:81:1E0:44:44:17:27:44 0/0:0:0:0:0:50:0%:92:1E0:41:50:20:30:53 0/0:0:0:0:0:39:0%:74:1E0:44:39:25:14:40 0/0:0:0:0:0:45:0%:85:1E0:43:45:20:25:45 0/0:0:0:0:0:22:0%:40:1E0:45:22:14:8:22 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:36 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:41 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:33 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:38 0/0:0:0:0:0:34:0%:62:1E0:46:34:16:18:35 0/0:0:0:0:0:60:0%:99:1E0:40:60:29:31:60 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 MTB_anc 4304052 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3829c_Rv3829c|gene3911|transcript|Transcript_gene3911|Coding|1/1|c.957C>G|p.Asp319Glu|957/1611|957/1611|319/536||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4304052G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4304052G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:53:33:20:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:49:12:9:3:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:50:25:25:51:98.04%:99:9.9117E-30:0:0:0:0:51 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:52:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:53:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:47:26:10:16:27:96.3%:99:1.4382E-14:38:1:0:1:27 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:46:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:44:40:25:15:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:44:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:60:37:23:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:49:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:48:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:52:34:18:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:39:48:33:15:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:45 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:59:33:26:59:100%:99:4.1056E-35:0:0:0:0:62 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 MTB_anc 4306929 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv3833_Rv3833|gene3915|transcript|Transcript_gene3915|Coding|1/1|c.63G>T|p.Arg21Arg|63/792|63/792|21/263||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4306929G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.4306929G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:54:19:35:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:51:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:49:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:51:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:47:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:36:15:21:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:53:18:35:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:47:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:70:36:34:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:43:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:53:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:47:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:29:14:15:30:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:39:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:33:9:24:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:40:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:44:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:37:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:51:18:33:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:45:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:42:10:32:43:97.67%:99:6.6289E-24:60:1:1:0:45 1/1:45:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:49:33:16:50:98%:99:5.0549E-28:60:1:0:1:50 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 MTB_anc 4313128 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3839_Rv3839|gene3921|transcript|Transcript_gene3921|Coding|1/1|c.364T>C|p.Ser122Pro|364/777|364/777|122/258||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4313128T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4313128T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:48:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:46:24:9:15:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:52:11:4:7:11:100%:58:1.4176E-6:0:0:0:0:13 1/1:42:51:26:25:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:40:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:47:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:52:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:74:31:43:74:100%:99:4.2804E-44:0:0:0:0:75 1/1:47:48:18:30:48:100%:99:1.554E-28:0:0:0:0:49 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:58:24:34:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:48:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:42:13:29:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:48:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:45:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:47:34:13:21:35:97.14%:99:3.2089E-19:60:1:0:1:35 1/1:48:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:45:43:20:23:44:97.73%:99:1.7144E-24:36:1:0:1:44 1/1:39:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:41:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:57:25:32:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:48:17:31:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:43 MTB_anc 4315886 . C G . PASS AC=2;AF=6.667e-03;AN=300;ANN=G|missense_variant|MODERATE|Rv3843c_Rv3843c|gene3925|transcript|Transcript_gene3925|Coding|1/1|c.711G>C|p.Glu237Asp|711/1029|711/1029|237/342||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.4315886C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4315886C>G||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:41:0%:78:1E0:42:41:19:22:42 0/0:0:0:0:0:19:0%:37:1E0:49:19:9:10:19 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:60:1:0:1:30:3.33%:44:5E-1:45:29:16:13:30 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:32 0/0:0:0:0:0:37:0%:70:1E0:48:37:17:20:37 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:20:0%:36:1E0:48:20:11:9:21 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:43 0/0:0:0:0:0:26:0%:47:1E0:50:26:18:8:27 0/0:0:0:0:0:51:0%:97:1E0:43:51:21:30:52 0/0:0:0:0:0:18:0%:32:1E0:53:18:13:5:18 0/0:0:0:0:0:53:0%:99:1E0:46:53:32:21:53 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:31 0/0:0:0:0:0:45:0%:85:1E0:46:45:17:28:46 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:23:0%:44:1E0:45:23:16:7:23 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:39 0/0:0:0:0:0:29:0%:55:1E0:47:29:18:11:29 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:29 0/0:0:0:0:0:53:0%:99:1E0:43:53:25:28:53 0/0:0:0:0:0:43:0%:82:1E0:48:43:17:26:43 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:16:12:28 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:35:0%:67:1E0:42:35:18:17:36 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:28:0%:51:1E0:39:28:16:12:28 0/0:0:0:0:0:33:0%:63:1E0:41:33:16:17:33 0/0:0:0:0:0:25:0%:48:1E0:44:25:12:13:25 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:26 0/0:0:0:0:0:42:0%:77:1E0:47:42:19:23:42 0/0:0:0:0:0:26:0%:47:1E0:45:26:14:12:26 0/0:0:0:0:0:52:0%:96:1E0:44:52:26:26:52 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:33:0%:63:1E0:42:33:16:17:33 0/0:0:0:0:0:71:0%:99:1E0:46:71:35:36:71 0/0:0:0:0:0:47:0%:89:1E0:45:47:20:27:47 0/0:0:0:0:0:38:0%:70:1E0:47:38:13:25:38 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:46 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:36 0/0:0:0:0:0:24:0%:44:1E0:41:24:9:15:24 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:33 0/0:38:1:0:1:39:2.56%:62:5E-1:45:38:23:15:39 0/0:38:1:0:1:36:2.78%:55:5E-1:44:35:18:17:36 0/0:0:0:0:0:59:0%:99:1E0:42:59:27:32:60 0/0:0:0:0:0:43:0%:82:1E0:42:43:20:23:43 0/0:0:0:0:0:40:0%:74:1E0:43:40:19:21:41 0/0:0:0:0:0:20:0%:36:1E0:49:20:8:12:21 0/0:0:0:0:0:35:0%:67:1E0:43:35:18:17:38 0/0:0:0:0:0:25:0%:48:1E0:48:25:12:13:25 0/0:0:0:0:0:47:0%:89:1E0:43:47:21:26:48 0/0:0:0:0:0:31:0%:59:1E0:43:31:8:23:31 0/0:0:0:0:0:52:0%:96:1E0:41:52:24:28:55 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:38:1:1:0:45:2.22%:73:5E-1:45:44:18:26:46 0/0:60:1:0:1:50:2%:80:5E-1:47:49:24:25:51 0/0:0:0:0:0:26:0%:47:1E0:45:26:15:11:26 0/0:0:0:0:0:45:0%:85:1E0:47:45:25:20:46 0/0:0:0:0:0:35:0%:67:1E0:44:35:20:15:36 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:37 0/0:0:0:0:0:48:0%:89:1E0:46:48:22:26:48 0/0:0:0:0:0:57:0%:99:1E0:46:57:26:31:57 0/0:38:1:0:1:28:3.57%:41:5E-1:47:27:14:13:28 0/0:0:0:0:0:48:0%:89:1E0:44:48:27:21:48 0/0:50:1:0:1:20:5%:27:5E-1:45:19:7:12:20 0/0:0:0:0:0:22:0%:40:1E0:51:22:11:11:22 0/0:0:0:0:0:38:0%:70:1E0:49:38:16:22:38 0/0:0:0:0:0:27:0%:52:1E0:49:27:11:16:27 0/0:0:0:0:0:25:0%:48:1E0:49:25:13:12:25 0/0:0:0:0:0:41:0%:78:1E0:52:41:17:24:41 0/0:0:0:0:0:46:0%:85:1E0:43:46:25:21:48 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:0:0:0:0:26:0%:47:1E0:43:26:15:11:26 0/0:0:0:0:0:42:0%:77:1E0:48:42:25:17:42 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:38 0/0:0:0:0:0:26:0%:47:1E0:43:26:11:15:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:22:16:41 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:43 0/0:0:0:0:0:40:0%:74:1E0:42:40:20:20:40 0/0:0:0:0:0:35:0%:67:1E0:48:35:18:17:35 0/0:0:0:0:0:23:0%:44:1E0:40:23:12:11:23 0/0:0:0:0:0:41:0%:78:1E0:37:41:20:21:41 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:36 0/0:0:0:0:0:24:0%:44:1E0:46:24:6:18:24 0/0:0:0:0:0:38:0%:70:1E0:45:38:17:21:38 0/0:0:0:0:0:27:0%:52:1E0:50:27:12:15:27 0/0:0:0:0:0:50:0%:92:1E0:40:50:25:25:50 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:28 0/0:0:0:0:0:37:0%:70:1E0:42:37:14:23:37 0/0:0:0:0:0:17:0%:33:1E0:50:17:8:9:17 0/0:0:0:0:0:37:0%:70:1E0:40:37:18:19:37 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:36 0/0:0:0:0:0:30:0%:55:1E0:40:30:17:13:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:34:0%:62:1E0:44:34:15:19:34 0/0:0:0:0:0:34:0%:62:1E0:41:34:18:16:35 0/0:0:0:0:0:34:0%:62:1E0:41:34:16:18:35 0/0:0:0:0:0:14:0%:25:1E0:41:14:10:4:15 0/0:0:0:0:0:30:0%:55:1E0:49:30:13:17:30 0/0:0:0:0:0:44:0%:81:1E0:43:44:19:25:44 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:42 0/0:0:0:0:0:30:0%:55:1E0:41:30:10:20:31 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:35 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:36 1/1:43:31:19:12:32:96.88%:99:1.8007E-17:34:1:1:0:32 0/0:0:0:0:0:25:0%:48:1E0:40:25:10:15:25 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:0:0:0:0:48:0%:89:1E0:39:48:20:28:48 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:47 0/0:0:0:0:0:35:0%:67:1E0:37:35:18:17:37 0/0:0:0:0:0:38:0%:70:1E0:45:38:19:19:38 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:28 0/0:0:0:0:0:61:0%:99:1E0:42:61:26:35:62 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:37 0/0:0:0:0:0:35:0%:67:1E0:41:35:21:14:35 0/0:0:0:0:0:14:0%:25:1E0:42:14:5:9:14 0/0:0:0:0:0:43:0%:82:1E0:42:43:21:22:43 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:40 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:51 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:45 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:48 0/0:0:0:0:0:42:0%:77:1E0:42:42:15:27:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:40 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:36 0/0:0:0:0:0:22:0%:40:1E0:38:22:7:15:25 0/0:0:0:0:0:40:0%:74:1E0:44:40:14:26:40 0/0:0:0:0:0:22:0%:40:1E0:41:22:13:9:23 0/0:36:1:0:1:32:3.12%:48:5E-1:44:31:15:16:33 0/0:0:0:0:0:69:0%:99:1E0:37:69:34:35:69 0/0:0:0:0:0:35:0%:67:1E0:40:35:15:20:35 0/0:0:0:0:0:34:0%:62:1E0:39:34:17:17:34 0/0:0:0:0:0:42:0%:77:1E0:39:42:23:19:43 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:27:0%:52:1E0:45:27:13:14:28 0/0:0:0:0:0:30:0%:55:1E0:45:30:7:23:30 0/0:0:0:0:0:36:0%:66:1E0:43:36:19:17:37 0/0:0:0:0:0:37:0%:70:1E0:43:37:18:19:37 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:25 0/0:0:0:0:0:42:0%:77:1E0:41:42:21:21:42 0/0:0:0:0:0:51:0%:97:1E0:47:51:20:31:51 0/0:0:0:0:0:50:0%:92:1E0:44:50:26:24:51 0/0:0:0:0:0:35:0%:67:1E0:40:35:17:18:36 MTB_anc 4316566 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|Rv3843c_Rv3843c|gene3925|transcript|Transcript_gene3925|Coding|1/1|c.31C>G|p.Arg11Gly|31/1029|31/1029|11/342||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.4316566G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4316566G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:66:31:35:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:64:17:47:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:27:7:20:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:70:34:36:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:50:15:35:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:48:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:46:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:48:18:30:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:29:8:21:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:32:23:9:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:70:30:40:70:100%:99:1.0659E-41:0:0:0:0:71 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:49:15:34:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:38:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:39:45:15:30:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:49:16:33:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:53:20:33:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:45:17:28:46:97.83%:99:9.6314E-27:0:0:0:0:48 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:35:9:26:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 4318425 . G C . PASS AC=299;AF=0.997;AN=300;ANN=C|intergenic_region|MODIFIER|MTS2975_RVnc0040-Rv3844_Rv3844|gene3926-gene3927|intergenic_region|gene3926-gene3927|||n.4318425G>C||||||;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 0/1:43:7:2:5:8:87.5%:35:2.9138E-4:0:0:0:0:8 1/1:44:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:52:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:52:12:8:4:12:100%:64:3.698E-7:0:0:0:0:12 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:54:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:8:4:4:8:100%:41:7.77E-5:0:0:0:0:9 1/1:51:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:52:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:53:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:31:18:13:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:40:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:26 1/1:48:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:51:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:51:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:11:3:8:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:47:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:56:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:43:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:54:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:40:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:49:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:52:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:19:9:10:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:39:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:16 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 MTB_anc 4318703 . G A . PASS AC=34;AF=1.00;AN=34;ANN=A|intergenic_region|MODIFIER|MTS2975_RVnc0040-Rv3844_Rv3844|gene3926-gene3927|intergenic_region|gene3926-gene3927|||n.4318703G>A||||||;HET=0;WT=0;set-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./. ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 1/1:38:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:38:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:0 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./. ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:12:0:12:12:100%:64:3.698E-7:0:0:0:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:9:2:7:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:36:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./. 1/1:37:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:36:8:0:8:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 1/1:36:7:1:6:7:100%:35:2.9138E-4:0:0:0:0:7 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:19:1:18:19:100%:99:2.8292E-11:0:0:0:0:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:37:8:1:7:8:100%:41:7.77E-5:0:0:0:0:8 1/1:38:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:4 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:38:7:0:7:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:8:2:6:8:100%:41:7.77E-5:0:0:0:0:9 ./.:.:.:.:.:.:.:.:.:.:.:.:.:1 ./.:.:.:.:.:.:.:.:.:.:.:.:.:3 ./.:.:.:.:.:.:.:.:.:.:.:.:.:2 1/1:37:14:1:13:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:8:0:8:8:100%:41:7.77E-5:0:0:0:0:9 MTB_anc 4323006 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv3848_Rv3848|gene3931|transcript|Transcript_gene3931|Coding|1/1|c.681A>G|p.Ala227Ala|681/909|681/909|227/302||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4323006A>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4323006A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:12:1:11:12:100%:64:3.698E-7:0:0:0:0:12 1/1:37:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:20:5:15:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:36:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:19:5:14:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:36:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:37:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:49:15:34:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:24:6:18:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:32:6:26:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:37:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:21:6:15:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:36:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:39:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:23:5:18:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:36:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:26:5:21:27:96.3%:99:2.0165E-15:0:0:0:0:28 1/1:39:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:14:4:10:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:26:7:19:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:35:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:36:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:24:4:20:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:24:9:15:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:5:21:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:31 1/1:37:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:35:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:37:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:36:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:35:21:4:17:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:35:37:7:30:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:36:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:36:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:36:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:35:20:2:18:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:37:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:35:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:36:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:37:28:6:22:28:100%:99:1.3074E-16:0:0:0:0:32 1/1:38:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:25:3:22:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:36:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:37:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:29:5:24:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:24 MTB_anc 4323355 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|Rv3848_Rv3848-espR_Rv3849|gene3931-gene3932|intergenic_region|gene3931-gene3932|||n.4323355G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:32:24:8:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:46:25:21:48:97.87%:99:2.9526E-26:37:1:0:1:49 1/1:51:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:46:30:16:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:26:13:13:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:63:31:32:63:100%:99:1.657E-37:0:0:0:0:64 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:13:10:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:60:34:26:61:100%:99:1.035E-35:0:0:0:0:63 1/1:43:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:30:15:15:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:46:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:44:16:6:10:17:94.12%:81:7.7134E-9:33:1:0:1:17 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:55:42:13:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:24:8:16:25:100%:99:3.101E-14:0:0:0:0:25 1/1:43:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:29:12:17:30:100%:99:3.3259E-17:0:0:0:0:31 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:33:20:13:34:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:21:15:6:22:95.45%:99:1.0931E-11:31:1:0:1:22 1/1:42:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:55:28:27:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:28:19:9:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:29:19:10:30:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:51:33:18:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:30:16:14:31:96.77%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:48:32:16:48:100%:99:1.554E-28:0:0:0:0:50 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:48:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:42:28:14:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:40:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:52:36:16:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:41:25:16:42:97.62%:99:2.3541E-24:0:0:0:0:42 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:65:33:32:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 MTB_anc 4323950 . G A . PASS AC=2;AF=6.667e-03;AN=300;ANN=A|intergenic_region|MODIFIER|espR_Rv3849-Rv3850_Rv3850|gene3932-gene3933|intergenic_region|gene3932-gene3933|||n.4323950G>A||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:50:0%:92:1E0:43:50:24:26:52 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:20 0/0:0:0:0:0:55:0%:99:1E0:42:55:26:29:55 0/0:0:0:0:0:24:0%:44:1E0:45:24:14:10:25 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:21 0/0:0:0:0:0:22:0%:40:1E0:43:22:9:13:22 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:23 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:33 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:24 0/0:0:0:0:0:21:0%:40:1E0:48:21:9:12:21 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:32 0/0:0:0:0:0:15:0%:29:1E0:50:15:10:5:15 0/0:0:0:0:0:53:0%:99:1E0:41:53:25:28:57 0/0:0:0:0:0:38:0%:70:1E0:40:38:15:23:39 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:33 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:15:14:29 0/0:0:0:0:0:26:0%:47:1E0:38:26:10:16:26 0/0:0:0:0:0:26:0%:47:1E0:47:26:17:9:26 0/0:0:0:0:0:38:0%:70:1E0:43:38:17:21:38 0/0:0:0:0:0:36:0%:66:1E0:45:36:15:21:38 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:36 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:30 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:25 0/0:0:0:0:0:22:0%:40:1E0:49:22:8:14:22 0/0:0:0:0:0:32:0%:59:1E0:40:32:17:15:33 0/0:39:1:1:0:35:2.86%:55:5E-1:43:34:22:12:35 0/0:0:0:0:0:39:0%:74:1E0:42:39:21:18:40 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:16:11:27 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:32 0/0:0:0:0:0:47:0%:89:1E0:40:47:24:23:47 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:36 0/0:0:0:0:0:55:0%:99:1E0:45:55:30:25:56 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:40:0%:74:1E0:44:40:18:22:42 0/0:0:0:0:0:31:0%:59:1E0:41:31:17:14:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:33 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:30 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:33 0/0:0:0:0:0:45:0%:85:1E0:41:45:23:22:45 0/0:60:1:1:0:49:2.04%:80:5E-1:42:48:28:20:50 0/0:0:0:0:0:45:0%:85:1E0:42:45:26:19:45 0/0:0:0:0:0:45:0%:85:1E0:40:45:27:18:47 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:51 0/0:0:0:0:0:39:0%:74:1E0:45:39:21:18:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:15:13:28 0/0:0:0:0:0:46:0%:85:1E0:40:46:26:20:47 0/0:0:0:0:0:19:0%:37:1E0:47:19:8:11:19 0/0:0:0:0:0:36:0%:66:1E0:41:36:17:19:36 0/0:0:0:0:0:37:0%:70:1E0:41:37:15:22:38 0/0:0:0:0:0:44:0%:81:1E0:39:44:26:18:44 0/0:0:0:0:0:39:0%:74:1E0:41:39:22:17:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:16:21:38 0/0:0:0:0:0:43:0%:82:1E0:43:43:27:16:46 0/0:0:0:0:0:40:0%:74:1E0:45:40:19:21:40 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:49:0%:93:1E0:41:49:26:23:50 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:29 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:39 0/0:0:0:0:0:48:0%:89:1E0:45:48:24:24:53 0/0:0:0:0:0:26:0%:47:1E0:42:26:15:11:26 0/0:0:0:0:0:48:0%:89:1E0:45:48:27:21:48 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:26 0/0:34:1:1:0:19:5.26%:28:5E-1:45:18:7:11:20 0/0:0:0:0:0:32:0%:59:1E0:46:32:14:18:32 0/0:0:0:0:0:19:0%:37:1E0:47:19:10:9:20 0/0:38:1:0:1:18:5.56%:24:5E-1:39:17:11:6:18 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:36 0/0:0:0:0:0:51:0%:97:1E0:41:51:29:22:51 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:45:0%:85:1E0:41:45:25:20:45 0/0:0:0:0:0:38:0%:70:1E0:50:38:22:16:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:20:15:36 0/0:0:0:0:0:40:0%:74:1E0:44:40:20:20:41 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:50:0%:92:1E0:39:50:26:24:50 0/0:0:0:0:0:29:0%:55:1E0:44:29:19:10:31 0/0:0:0:0:0:37:0%:70:1E0:46:37:22:15:37 0/0:0:0:0:0:34:0%:62:1E0:41:34:20:14:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:23:15:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:14:23:39 0/0:0:0:0:0:25:0%:48:1E0:41:25:18:7:25 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:34 0/0:0:0:0:0:21:0%:40:1E0:47:21:13:8:21 0/0:0:0:0:0:28:0%:51:1E0:49:28:17:11:28 0/0:0:0:0:0:24:0%:44:1E0:49:24:13:11:24 0/0:0:0:0:0:48:0%:89:1E0:41:48:21:27:48 0/0:0:0:0:0:28:0%:51:1E0:41:28:11:17:28 0/0:0:0:0:0:49:0%:93:1E0:41:49:17:32:50 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:51:1:1:0:29:3.45%:45:5E-1:39:28:13:15:30 0/0:0:0:0:0:27:0%:52:1E0:41:27:12:15:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:13:15:29 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:36:0%:66:1E0:43:36:24:12:36 0/0:0:0:0:0:30:0%:55:1E0:41:30:20:10:30 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:24 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:24 0/0:0:0:0:0:20:0%:36:1E0:46:20:15:5:20 0/0:0:0:0:0:25:0%:48:1E0:43:25:15:10:25 0/0:0:0:0:0:22:0%:40:1E0:47:22:9:13:22 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:38:0%:70:1E0:40:38:20:18:39 0/0:0:0:0:0:27:0%:52:1E0:45:27:12:15:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:25 0/0:0:0:0:0:36:0%:66:1E0:39:36:23:13:36 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:35 0/0:0:0:0:0:28:0%:51:1E0:38:28:11:17:31 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:30:0%:55:1E0:39:30:16:14:31 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:27 0/0:0:0:0:0:71:0%:99:1E0:40:71:40:31:71 0/0:0:0:0:0:48:0%:89:1E0:40:48:26:22:48 0/0:20:1:1:0:20:5%:27:5E-1:42:19:10:9:21 0/0:0:0:0:0:24:0%:44:1E0:41:24:12:12:25 0/0:0:0:0:0:33:0%:63:1E0:37:33:17:16:34 0/0:0:0:0:0:35:0%:67:1E0:40:35:14:21:36 0/0:0:0:0:0:47:0%:89:1E0:41:47:29:18:49 0/0:0:0:0:0:31:0%:59:1E0:37:31:16:15:32 0/0:0:0:0:0:39:0%:74:1E0:39:39:24:15:41 0/0:0:0:0:0:33:0%:63:1E0:38:33:17:16:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:15:18:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:18:15:35 0/0:0:0:0:0:33:0%:63:1E0:37:33:15:18:33 0/0:0:0:0:0:36:0%:66:1E0:38:36:15:21:38 0/0:0:0:0:0:37:0%:70:1E0:39:37:11:26:39 0/0:0:0:0:0:22:0%:40:1E0:37:22:12:10:27 0/0:0:0:0:0:35:0%:67:1E0:41:35:17:18:35 0/0:0:0:0:0:56:0%:99:1E0:37:56:21:35:61 0/0:0:0:0:0:46:0%:85:1E0:42:46:27:19:46 0/0:0:0:0:0:32:0%:59:1E0:43:32:20:12:33 0/0:0:0:0:0:52:0%:96:1E0:41:52:30:22:52 0/0:0:0:0:0:30:0%:55:1E0:41:30:11:19:31 0/0:0:0:0:0:25:0%:48:1E0:40:25:14:11:25 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:32 0/0:0:0:0:0:32:0%:59:1E0:41:32:16:16:32 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:30 0/0:0:0:0:0:18:0%:32:1E0:46:18:10:8:18 0/0:0:0:0:0:35:0%:67:1E0:44:35:16:19:37 0/0:0:0:0:0:46:0%:85:1E0:39:46:26:20:46 0/0:0:0:0:0:43:0%:82:1E0:41:43:23:20:47 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 MTB_anc 4327728 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|ethR_Rv3855|gene3938|transcript|Transcript_gene3938|Coding|1/1|c.180G>A|p.Thr60Thr|180/651|180/651|60/216||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4327728G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|ethionamide_prothionamide_thioacetazone|||n.4327728G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|regulatory_proteins|||n.4327728G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:48:31:17:48:100%:99:1.554E-28:0:0:0:0:52 1/1:46:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:32:10:22:33:96.97%:99:4.7095E-18:38:1:0:1:33 1/1:43:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:30:13:17:31:96.77%:99:6.8754E-17:27:1:0:1:32 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:47:18:29:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:49:18:31:49:100%:99:3.925E-29:0:0:0:0:50 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:36:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:30:8:22:31:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:39:13:26:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:37:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:59:30:29:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:49:21:28:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:48:26:22:48:100%:99:1.554E-28:0:0:0:0:49 1/1:35:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:47 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:57 1/1:42:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:39:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:48:23:25:49:97.96%:99:1.9625E-27:38:1:0:1:49 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:41:44:25:19:45:97.78%:99:4.4304E-25:32:1:0:1:46 1/1:39:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:40:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 4329757 . G A . PASS AC=1;AF=3.333e-03;AN=300;ANN=A|intergenic_region|MODIFIER|Rv3857c_Rv3857c-gltD_Rv3858c|gene3940-gene3941|intergenic_region|gene3940-gene3941|||n.4329757G>A||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:39:0%:74:1E0:44:39:19:20:39 0/0:0:0:0:0:18:0%:32:1E0:48:18:7:11:18 0/0:0:0:0:0:58:0%:99:1E0:47:58:29:29:58 0/0:0:0:0:0:24:0%:44:1E0:48:24:12:12:24 0/0:0:0:0:0:34:0%:62:1E0:46:34:15:19:34 0/0:0:0:0:0:27:0%:52:1E0:43:27:16:11:27 0/0:0:0:0:0:34:0%:62:1E0:48:34:15:19:34 0/0:0:0:0:0:27:0%:52:1E0:49:27:18:9:27 0/0:0:0:0:0:43:0%:82:1E0:48:43:19:24:43 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:35 0/0:0:0:0:0:35:0%:67:1E0:51:35:16:19:35 0/0:0:0:0:0:46:0%:85:1E0:41:46:18:28:47 0/0:0:0:0:0:33:0%:63:1E0:47:33:20:13:33 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:26:0%:47:1E0:46:26:13:13:27 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:38 0/0:0:0:0:0:21:0%:40:1E0:46:21:11:10:21 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:25 0/0:0:0:0:0:18:0%:32:1E0:47:18:10:8:19 0/0:0:0:0:0:29:0%:55:1E0:47:29:15:14:29 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:45:0%:85:1E0:45:45:23:22:46 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:53:0%:99:1E0:48:53:24:29:53 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:20:0%:36:1E0:43:20:9:11:20 0/0:0:0:0:0:16:0%:29:1E0:45:16:7:9:16 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:25 0/0:0:0:0:0:34:0%:62:1E0:45:34:20:14:34 0/0:0:0:0:0:24:0%:44:1E0:43:24:9:15:24 0/0:0:0:0:0:35:0%:67:1E0:48:35:21:14:35 0/0:0:0:0:0:24:0%:44:1E0:46:24:12:12:24 0/0:0:0:0:0:30:0%:55:1E0:49:30:16:14:30 0/0:0:0:0:0:39:0%:74:1E0:46:39:15:24:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:14:24:38 0/0:38:1:0:1:64:1.56%:99:5E-1:48:63:29:34:65 0/0:0:0:0:0:46:0%:85:1E0:48:46:24:22:47 0/0:0:0:0:0:54:0%:99:1E0:49:54:22:32:54 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:35 0/0:0:0:0:0:27:0%:52:1E0:47:27:16:11:27 0/0:0:0:0:0:18:0%:32:1E0:50:18:12:6:18 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:26 0/0:0:0:0:0:30:0%:55:1E0:45:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:45:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:50:0%:92:1E0:43:50:28:22:51 0/0:0:0:0:0:38:0%:70:1E0:41:38:21:17:38 0/0:0:0:0:0:46:0%:85:1E0:48:46:32:14:46 0/0:0:0:0:0:23:0%:44:1E0:49:23:9:14:23 0/0:0:0:0:0:24:0%:44:1E0:40:24:10:14:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:33:0%:63:1E0:46:33:17:16:33 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:33 0/0:0:0:0:0:49:0%:93:1E0:44:49:22:27:49 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:20:0%:36:1E0:44:20:14:6:20 0/0:0:0:0:0:37:0%:70:1E0:46:37:15:22:38 0/0:0:0:0:0:47:0%:89:1E0:48:47:25:22:47 0/0:0:0:0:0:22:0%:40:1E0:49:22:9:13:22 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:46 0/0:0:0:0:0:54:0%:99:1E0:47:54:33:21:55 0/0:0:0:0:0:29:0%:55:1E0:45:29:16:13:30 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:47:0%:89:1E0:46:47:25:22:47 0/0:0:0:0:0:25:0%:48:1E0:47:25:10:15:25 0/0:0:0:0:0:34:0%:62:1E0:49:34:21:13:34 0/0:0:0:0:0:18:0%:32:1E0:49:18:13:5:18 0/0:0:0:0:0:26:0%:47:1E0:46:26:9:17:27 0/0:0:0:0:0:37:0%:70:1E0:48:37:26:11:37 0/0:0:0:0:0:35:0%:67:1E0:48:35:16:19:36 0/0:0:0:0:0:19:0%:37:1E0:45:19:13:6:19 0/0:0:0:0:0:38:0%:70:1E0:48:38:19:19:39 0/0:0:0:0:0:42:0%:77:1E0:44:42:26:16:42 0/0:0:0:0:0:24:0%:44:1E0:45:24:13:11:25 0/0:0:0:0:0:19:0%:37:1E0:44:19:10:9:19 0/0:0:0:0:0:39:0%:74:1E0:46:39:21:18:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:31 0/0:38:1:1:0:39:2.56%:62:5E-1:45:38:23:15:39 0/0:0:0:0:0:31:0%:59:1E0:43:31:18:13:31 0/0:0:0:0:0:27:0%:52:1E0:45:27:10:17:27 0/0:0:0:0:0:40:0%:74:1E0:46:40:20:20:40 0/0:0:0:0:0:32:0%:59:1E0:43:32:15:17:32 0/0:0:0:0:0:29:0%:55:1E0:47:29:17:12:29 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:28 0/0:0:0:0:0:29:0%:55:1E0:51:29:13:16:29 0/0:0:0:0:0:41:0%:78:1E0:48:41:21:20:41 0/0:0:0:0:0:26:0%:47:1E0:48:26:15:11:26 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:23:0%:44:1E0:48:23:10:13:24 0/0:0:0:0:0:47:0%:89:1E0:42:47:22:25:47 0/0:0:0:0:0:34:0%:62:1E0:46:34:18:16:34 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:46 0/0:0:0:0:0:33:0%:63:1E0:41:33:11:22:33 0/0:0:0:0:0:27:0%:52:1E0:47:27:12:15:27 0/0:0:0:0:0:36:0%:66:1E0:44:36:14:22:36 0/0:0:0:0:0:34:0%:62:1E0:46:34:19:15:35 0/0:50:1:1:0:33:3.03%:52:5E-1:43:32:12:20:33 0/0:0:0:0:0:26:0%:47:1E0:42:26:11:15:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:18:16:34 0/0:0:0:0:0:42:0%:77:1E0:48:42:21:21:43 0/0:0:0:0:0:40:0%:74:1E0:40:40:25:15:43 0/0:0:0:0:0:18:0%:32:1E0:48:18:9:9:18 0/0:0:0:0:0:27:0%:52:1E0:47:27:14:13:27 0/0:0:0:0:0:27:0%:52:1E0:38:27:17:10:27 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:39 0/0:0:0:0:0:31:0%:59:1E0:46:31:17:14:31 0/0:0:0:0:0:46:0%:85:1E0:48:46:25:21:47 0/0:0:0:0:0:30:0%:55:1E0:47:30:15:15:31 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:38 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 0/0:0:0:0:0:49:0%:93:1E0:41:49:29:20:50 0/0:0:0:0:0:50:0%:92:1E0:43:50:24:26:51 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:36:0%:66:1E0:45:36:23:13:36 0/0:0:0:0:0:22:0%:40:1E0:45:22:12:10:23 0/0:0:0:0:0:51:0%:97:1E0:41:51:26:25:51 0/0:0:0:0:0:44:0%:81:1E0:42:44:27:17:44 0/1:46:18:7:11:31:58.06%:69:1.1154E-7:40:13:9:4:31 0/0:0:0:0:0:27:0%:52:1E0:44:27:16:11:27 0/0:0:0:0:0:37:0%:70:1E0:40:37:12:25:37 0/0:32:1:0:1:30:3.33%:44:5E-1:44:29:17:12:31 0/0:0:0:0:0:51:0%:97:1E0:41:51:20:31:53 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:40 0/0:0:0:0:0:51:0%:97:1E0:41:51:31:20:52 0/0:0:0:0:0:43:0%:82:1E0:40:43:24:19:44 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:40 0/0:0:0:0:0:34:0%:62:1E0:40:34:20:14:36 0/0:0:0:0:0:49:0%:93:1E0:43:49:29:20:50 0/0:0:0:0:0:49:0%:93:1E0:40:49:28:21:49 0/0:0:0:0:0:47:0%:89:1E0:39:47:31:16:48 0/0:0:0:0:0:43:0%:82:1E0:39:43:26:17:44 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:44 0/0:0:0:0:0:57:0%:99:1E0:41:57:30:27:59 0/0:0:0:0:0:39:0%:74:1E0:41:39:16:23:39 0/0:0:0:0:0:41:0%:78:1E0:43:41:21:20:43 0/0:0:0:0:0:47:0%:89:1E0:43:47:23:24:47 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:27 0/0:0:0:0:0:26:0%:47:1E0:42:26:19:7:26 0/0:0:0:0:0:36:0%:66:1E0:44:36:24:12:37 0/0:0:0:0:0:47:0%:89:1E0:45:47:21:26:47 0/0:0:0:0:0:48:0%:89:1E0:41:48:29:19:49 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:51:0%:97:1E0:43:51:34:17:52 0/0:0:0:0:0:43:0%:82:1E0:43:43:23:20:44 0/0:0:0:0:0:52:0%:96:1E0:39:52:22:30:54 0/0:0:0:0:0:37:0%:70:1E0:45:37:16:21:37 MTB_anc 4329782 . A G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|Rv3857c_Rv3857c-gltD_Rv3858c|gene3940-gene3941|intergenic_region|gene3940-gene3941|||n.4329782A>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:48:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:38:17:21:39:97.44%:99:1.4508E-22:0:0:0:0:39 1/1:50:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:50:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:42:22:20:43:97.67%:99:6.6289E-24:60:1:1:0:44 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:21:12:9:22:95.45%:99:1.8578E-12:0:0:0:0:22 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:52:24:28:53:98.11%:99:8.609E-30:60:1:0:1:53 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:50:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:31:17:14:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:50:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:65:30:35:65:100%:99:1.0519E-38:0:0:0:0:65 1/1:48:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:49:29:20:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:50:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:36:16:20:37:97.3%:99:2.2598E-21:0:0:0:0:37 1/1:47:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:49:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:47:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:22:9:13:23:95.65%:99:4.7526E-13:0:0:0:0:24 1/1:49:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:33:16:17:34:97.06%:99:1.2301E-18:39:1:1:0:34 1/1:43:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:39:26:13:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:49:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:56:24:32:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:48:26:22:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:31 1/1:41:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:42:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:45:28:17:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:41:44:32:12:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:60:30:30:61:98.36%:99:1.035E-35:0:0:0:0:62 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 MTB_anc 4334284 . G T . PASS AC=68;AF=0.227;AN=300;ANN=T|synonymous_variant|LOW|gltB_Rv3859c|gene3942|transcript|Transcript_gene3942|Coding|1/1|c.1798C>A|p.Arg600Arg|1798/4584|1798/4584|600/1527||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4334284G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4334284G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:49:0%:93:1E0:42:49:29:20:50 0/0:37:1:1:0:25:4%:38:5E-1:47:24:11:13:25 0/0:0:0:0:0:53:0%:99:1E0:44:53:29:24:53 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:32 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:60:1:1:0:29:3.45%:45:5E-1:48:28:15:13:29 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:27 0/0:0:0:0:0:32:0%:59:1E0:52:32:15:17:32 0/0:0:0:0:0:29:0%:55:1E0:48:29:12:17:29 1/1:48:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:39:1:0:1:48:2.08%:76:5E-1:45:47:23:24:49 0/0:60:1:0:1:21:4.76%:31:5E-1:48:20:7:13:22 0/0:0:0:0:0:52:0%:96:1E0:44:52:25:27:53 0/0:0:0:0:0:23:0%:44:1E0:41:23:11:12:24 0/0:0:0:0:0:45:0%:85:1E0:48:45:19:26:46 0/0:0:0:0:0:29:0%:55:1E0:45:29:13:16:29 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:25 1/1:45:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 0/0:0:0:0:0:39:0%:74:1E0:47:39:16:23:39 0/0:0:0:0:0:23:0%:44:1E0:42:23:10:13:24 0/0:0:0:0:0:63:0%:99:1E0:42:63:32:31:63 0/0:0:0:0:0:28:0%:51:1E0:45:28:13:15:28 0/0:0:0:0:0:38:0%:70:1E0:46:38:20:18:40 0/0:0:0:0:0:29:0%:55:1E0:45:29:12:17:29 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:30:0%:55:1E0:44:30:18:12:30 1/1:50:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:18:14:32 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 0/0:0:0:0:0:29:0%:55:1E0:46:29:8:21:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:14:21:35 0/0:39:1:0:1:38:2.63%:58:5E-1:50:37:19:18:38 0/0:29:1:0:1:21:4.76%:31:5E-1:44:20:9:11:21 0/0:0:0:0:0:29:0%:55:1E0:47:29:18:11:29 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:28 0/0:0:0:0:0:33:0%:63:1E0:45:33:15:18:33 0/0:60:1:0:1:58:1.72%:94:5E-1:45:57:30:27:58 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:38 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:43 0/0:0:0:0:0:36:0%:66:1E0:42:36:16:20:36 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:45 0/0:0:0:0:0:19:0%:37:1E0:42:19:8:11:19 0/0:0:0:0:0:26:0%:47:1E0:45:26:11:15:26 1/1:45:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:36:0%:66:1E0:47:36:11:25:36 0/0:0:0:0:0:34:0%:62:1E0:44:34:23:11:35 0/0:0:0:0:0:50:0%:92:1E0:42:50:19:31:52 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:38:0%:70:1E0:52:38:18:20:38 0/0:0:0:0:0:22:0%:40:1E0:47:22:11:11:22 0/0:47:1:0:1:37:2.7%:59:5E-1:42:36:19:17:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:26:0%:47:1E0:43:26:14:12:27 0/0:0:0:0:0:50:0%:92:1E0:40:50:28:22:51 0/0:0:0:0:0:41:0%:78:1E0:46:41:21:20:41 0/0:0:0:0:0:31:0%:59:1E0:45:31:17:14:32 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:42 0/0:0:0:0:0:43:0%:82:1E0:48:43:22:21:43 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:41:0%:78:1E0:44:41:18:23:41 0/0:0:0:0:0:48:0%:89:1E0:43:48:19:29:48 1/1:48:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:37:17:20:38:97.37%:99:5.6582E-21:38:1:0:1:38 1/1:45:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:23 0/0:0:0:0:0:30:0%:55:1E0:45:30:10:20:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:17:23:40 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 1/1:49:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:26 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:32 0/0:0:0:0:0:34:0%:62:1E0:46:34:12:22:34 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:22:0%:40:1E0:45:22:11:11:22 0/0:0:0:0:0:25:0%:48:1E0:47:25:13:12:25 1/1:45:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 0/0:0:0:0:0:38:0%:70:1E0:47:38:25:13:39 0/0:0:0:0:0:35:0%:67:1E0:43:35:12:23:35 1/1:43:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:15:18:33 0/0:0:0:0:0:30:0%:55:1E0:44:30:10:20:30 0/0:0:0:0:0:23:0%:44:1E0:46:23:12:11:23 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:38:0%:70:1E0:50:38:19:19:38 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:47:0%:89:1E0:41:47:25:22:47 0/0:0:0:0:0:28:0%:51:1E0:42:28:16:12:28 0/0:0:0:0:0:53:0%:99:1E0:43:53:26:27:53 0/0:0:0:0:0:24:0%:44:1E0:43:24:7:17:24 0/0:0:0:0:0:37:0%:70:1E0:39:37:16:21:38 0/0:0:0:0:0:36:0%:66:1E0:43:36:20:16:36 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 0/0:0:0:0:0:28:0%:51:1E0:44:28:9:19:28 0/0:0:0:0:0:32:0%:59:1E0:45:32:21:11:32 0/0:37:1:1:0:35:2.86%:55:5E-1:44:34:15:19:35 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:12:20:32 0/0:0:0:0:0:21:0%:40:1E0:47:21:8:13:22 0/0:0:0:0:0:20:0%:36:1E0:47:20:10:10:21 0/0:0:0:0:0:35:0%:67:1E0:44:35:18:17:36 0/0:0:0:0:0:41:0%:78:1E0:46:41:23:18:41 0/0:0:0:0:0:29:0%:55:1E0:47:29:16:13:29 0/0:0:0:0:0:37:0%:70:1E0:46:37:17:20:37 0/0:0:0:0:0:43:0%:82:1E0:44:43:22:21:45 0/0:0:0:0:0:25:0%:48:1E0:47:25:12:13:26 0/0:37:1:1:0:24:4.17%:34:5E-1:36:23:14:9:26 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:43 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:37 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:47 0/0:0:0:0:0:43:0%:82:1E0:39:43:23:20:45 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:23 0/0:0:0:0:0:69:0%:99:1E0:41:69:37:32:69 1/1:42:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 0/0:0:0:0:0:26:0%:47:1E0:42:26:12:14:27 0/0:0:0:0:0:25:0%:48:1E0:42:25:14:11:26 1/1:39:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:56 0/0:0:0:0:0:45:0%:85:1E0:42:45:18:27:45 0/0:0:0:0:0:44:0%:81:1E0:40:44:31:13:45 0/0:0:0:0:0:44:0%:81:1E0:39:44:13:31:44 0/0:0:0:0:0:49:0%:93:1E0:42:49:23:26:49 0/0:0:0:0:0:28:0%:51:1E0:42:28:12:16:28 0/0:0:0:0:0:45:0%:85:1E0:40:45:23:22:45 0/0:0:0:0:0:26:0%:47:1E0:40:26:14:12:27 1/1:40:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:31:0%:59:1E0:40:31:13:18:31 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:53:0%:99:1E0:40:53:26:27:53 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:42 0/0:0:0:0:0:47:0%:89:1E0:44:47:20:27:48 1/1:42:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 0/0:0:0:0:0:42:0%:77:1E0:43:42:23:19:42 0/0:0:0:0:0:44:0%:81:1E0:39:44:17:27:44 0/0:0:0:0:0:33:0%:63:1E0:44:33:12:21:34 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:40:18:22:41:97.56%:99:9.8874E-23:38:1:0:1:41 0/0:0:0:0:0:53:0%:99:1E0:43:53:23:30:53 0/0:0:0:0:0:40:0%:74:1E0:41:40:21:19:40 MTB_anc 4334425 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|gltB_Rv3859c|gene3942|transcript|Transcript_gene3942|Coding|1/1|c.1657G>C|p.Glu553Gln|1657/4584|1657/4584|553/1527||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4334425C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4334425C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:33:15:18:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:43:60:30:30:60:100%:99:1.035E-35:0:0:0:0:61 1/1:44:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:67:36:31:68:98.53%:99:6.6743E-40:0:0:0:0:69 1/1:47:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:26:14:12:27:96.3%:99:2.0165E-15:0:0:0:0:27 1/1:46:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:23:12:11:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:50:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:51:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:31:11:20:32:96.88%:99:2.1486E-18:0:0:0:0:32 1/1:44:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:47:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:47:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:48:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:56:41:15:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:48:32:21:11:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:40:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:44:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:55:32:23:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:41:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:56 1/1:39:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:40:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:44 MTB_anc 4336447 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|intergenic_region|MODIFIER|gltB_Rv3859c-Rv3860_Rv3860|gene3942-gene3943|intergenic_region|gene3942-gene3943|||n.4336447G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:54:0%:99:1E0:43:54:31:23:54 0/0:0:0:0:0:20:0%:36:1E0:46:20:11:9:20 0/0:0:0:0:0:57:0%:99:1E0:44:57:35:22:58 0/0:60:1:1:0:30:3.33%:44:5E-1:47:29:16:13:31 0/0:0:0:0:0:14:0%:25:1E0:40:14:11:3:15 0/0:0:0:0:0:23:0%:44:1E0:44:23:14:9:24 0/0:0:0:0:0:46:0%:85:1E0:45:46:23:23:47 0/0:0:0:0:0:17:0%:33:1E0:46:17:6:11:17 0/0:0:0:0:0:28:0%:51:1E0:47:28:16:12:30 0/0:0:0:0:0:42:0%:77:1E0:44:42:21:21:42 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:49 0/0:0:0:0:0:42:0%:77:1E0:44:42:20:22:42 0/0:0:0:0:0:21:0%:40:1E0:52:21:8:13:21 0/0:0:0:0:0:49:0%:93:1E0:41:49:29:20:50 0/0:0:0:0:0:15:0%:29:1E0:46:15:7:8:15 0/0:0:0:0:0:44:0%:81:1E0:44:44:27:17:45 0/0:0:0:0:0:28:0%:51:1E0:44:28:12:16:28 0/0:0:0:0:0:22:0%:40:1E0:44:22:15:7:23 0/0:0:0:0:0:29:0%:55:1E0:46:29:14:15:29 0/0:0:0:0:0:23:0%:44:1E0:47:23:14:9:25 0/0:0:0:0:0:29:0%:55:1E0:44:29:12:17:30 0/0:0:0:0:0:44:0%:81:1E0:46:44:25:19:44 0/0:0:0:0:0:35:0%:67:1E0:43:35:22:13:36 0/0:0:0:0:0:43:0%:82:1E0:41:43:27:16:44 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:21 0/0:0:0:0:0:19:0%:37:1E0:47:19:12:7:20 0/0:0:0:0:0:28:0%:51:1E0:40:28:19:9:28 0/0:0:0:0:0:27:0%:52:1E0:47:27:15:12:27 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:19 0/0:0:0:0:0:25:0%:48:1E0:45:25:12:13:25 0/0:0:0:0:0:24:0%:44:1E0:43:24:15:9:25 0/0:0:0:0:0:24:0%:44:1E0:44:24:10:14:25 0/0:0:0:0:0:35:0%:67:1E0:48:35:20:15:35 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:23 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:30:0%:55:1E0:45:30:16:14:30 0/0:0:0:0:0:44:0%:81:1E0:44:44:26:18:44 0/0:0:0:0:0:61:0%:99:1E0:47:61:36:25:62 0/0:0:0:0:0:55:0%:99:1E0:44:55:34:21:56 0/0:0:0:0:0:39:0%:74:1E0:44:39:29:10:39 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:30 0/0:0:0:0:0:45:0%:85:1E0:45:45:21:24:46 0/0:0:0:0:0:19:0%:37:1E0:44:19:12:7:21 0/0:0:0:0:0:22:0%:40:1E0:42:22:12:10:22 0/0:0:0:0:0:27:0%:52:1E0:44:27:17:10:27 0/0:0:0:0:0:47:0%:89:1E0:43:47:24:23:47 0/0:0:0:0:0:27:0%:52:1E0:45:27:21:6:28 0/0:0:0:0:0:34:0%:62:1E0:42:34:20:14:34 0/0:0:0:0:0:44:0%:81:1E0:44:44:18:26:44 0/0:0:0:0:0:39:0%:74:1E0:44:39:16:23:39 0/0:0:0:0:0:15:0%:29:1E0:44:15:8:7:15 0/0:0:0:0:0:47:0%:89:1E0:42:47:31:16:48 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:20:0%:36:1E0:45:20:9:11:20 0/0:0:0:0:0:43:0%:82:1E0:42:43:25:18:44 0/0:0:0:0:0:34:0%:62:1E0:41:34:19:15:35 0/0:0:0:0:0:20:0%:36:1E0:40:20:16:4:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:37:0%:70:1E0:45:37:24:13:37 0/0:0:0:0:0:31:0%:59:1E0:47:31:18:13:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:18:10:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:34 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:42 0/0:0:0:0:0:54:0%:99:1E0:44:54:30:24:55 0/0:0:0:0:0:22:0%:40:1E0:43:22:10:12:23 0/0:0:0:0:0:32:0%:59:1E0:46:32:21:11:32 0/0:0:0:0:0:13:0%:25:1E0:46:13:9:4:14 0/0:0:0:0:0:30:0%:55:1E0:44:30:20:10:30 0/0:0:0:0:0:35:0%:67:1E0:46:35:22:13:36 0/0:0:0:0:0:30:0%:55:1E0:47:30:13:17:30 0/0:0:0:0:0:24:0%:44:1E0:46:24:18:6:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:19:14:34 0/0:0:0:0:0:29:0%:55:1E0:39:29:17:12:30 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:27:0%:52:1E0:44:27:14:13:27 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:26:0%:47:1E0:40:26:20:6:26 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 0/0:0:0:0:0:34:0%:62:1E0:43:34:17:17:34 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:38 0/0:0:0:0:0:31:0%:59:1E0:47:31:19:12:31 0/0:0:0:0:0:27:0%:52:1E0:42:27:18:9:28 0/0:0:0:0:0:24:0%:44:1E0:42:24:16:8:26 0/0:0:0:0:0:28:0%:51:1E0:44:28:10:18:28 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:28:0%:51:1E0:49:28:10:18:29 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:22:0%:40:1E0:46:22:8:14:22 0/0:0:0:0:0:56:0%:99:1E0:39:56:33:23:58 0/0:0:0:0:0:28:0%:51:1E0:47:28:13:15:28 0/0:0:0:0:0:43:0%:82:1E0:45:43:26:17:44 0/0:0:0:0:0:20:0%:36:1E0:43:20:13:7:20 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:25:15:40 0/0:0:0:0:0:28:0%:51:1E0:46:28:19:9:29 0/0:0:0:0:0:41:0%:78:1E0:43:41:25:16:41 0/0:0:0:0:0:36:0%:66:1E0:38:36:20:16:37 0/0:0:0:0:0:35:0%:67:1E0:39:35:18:17:36 0/0:0:0:0:0:33:0%:63:1E0:43:33:16:17:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:20:15:35 0/0:0:0:0:0:27:0%:52:1E0:43:27:17:10:27 0/0:0:0:0:0:33:0%:63:1E0:43:33:20:13:33 0/0:0:0:0:0:31:0%:59:1E0:47:31:16:15:32 0/0:0:0:0:0:36:0%:66:1E0:44:36:13:23:37 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:25 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:20:13:35 0/0:0:0:0:0:45:0%:85:1E0:41:45:29:16:46 0/0:0:0:0:0:30:0%:55:1E0:41:30:18:12:31 0/0:0:0:0:0:51:0%:97:1E0:40:51:27:24:52 0/0:0:0:0:0:46:0%:85:1E0:40:46:25:21:46 0/0:0:0:0:0:37:0%:70:1E0:40:37:20:17:38 0/0:0:0:0:0:22:0%:40:1E0:37:22:10:12:23 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:50 0/0:0:0:0:0:66:0%:99:1E0:40:66:42:24:66 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 0/0:0:0:0:0:30:0%:55:1E0:42:30:14:16:31 0/0:0:0:0:0:48:0%:89:1E0:40:48:30:18:50 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:31 0/0:0:0:0:0:40:0%:74:1E0:40:40:26:14:40 0/0:0:0:0:0:27:0%:52:1E0:38:27:16:11:29 0/0:0:0:0:0:45:0%:85:1E0:39:45:20:25:49 0/0:0:0:0:0:52:0%:96:1E0:40:52:30:22:53 0/0:0:0:0:0:45:0%:85:1E0:41:45:30:15:48 0/0:0:0:0:0:38:0%:70:1E0:41:38:19:19:38 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:41 0/0:0:0:0:0:36:0%:66:1E0:39:36:17:19:36 0/0:0:0:0:0:36:0%:66:1E0:41:36:18:18:37 0/0:0:0:0:0:33:0%:63:1E0:37:33:19:14:34 0/0:0:0:0:0:33:0%:63:1E0:41:33:14:19:33 0/0:0:0:0:0:42:0%:77:1E0:37:42:25:17:44 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:39 0/0:0:0:0:0:46:0%:85:1E0:42:46:28:18:47 0/0:0:0:0:0:48:0%:89:1E0:43:48:29:19:49 0/0:0:0:0:0:38:0%:70:1E0:42:38:21:17:38 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:38:0%:70:1E0:42:38:20:18:38 0/0:0:0:0:0:42:0%:77:1E0:42:42:25:17:44 0/0:0:0:0:0:35:0%:67:1E0:43:35:16:19:36 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:38:0%:70:1E0:43:38:23:15:39 0/0:0:0:0:0:61:0%:99:1E0:41:61:38:23:61 0/0:0:0:0:0:46:0%:85:1E0:41:46:29:17:46 MTB_anc 4336597 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|gltB_Rv3859c-Rv3860_Rv3860|gene3942-gene3943|intergenic_region|gene3942-gene3943|||n.4336597A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:15:1:14:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:49:15:34:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:22:6:16:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:9:1:8:9:100%:46:2.0568E-5:0:0:0:0:11 1/1:41:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:53:17:36:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:47:11:36:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:38:24:5:19:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:12:2:10:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:24:5:19:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:28:5:23:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:23:6:17:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:48:16:32:48:100%:99:1.554E-28:0:0:0:0:49 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:25:6:19:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:36:8:28:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:34:10:24:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:40:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:27:6:21:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:38:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:51:10:41:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:37:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:30 1/1:38:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:39:9:3:6:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:37:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:37:29:6:23:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:37:18:5:13:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:28:3:25:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:38:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:41:9:32:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:16:3:13:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:28:6:22:29:96.55%:99:9.9776E-16:38:1:0:1:31 1/1:38:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:39:9:30:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:35:10:25:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:33:8:25:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:25:5:20:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:39:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:33:6:27:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:24:6:18:24:100%:99:3.101E-14:0:0:0:0:28 1/1:37:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:46:11:35:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:37:31:6:25:32:96.88%:99:1.8007E-17:30:1:0:1:32 1/1:37:40:11:29:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:38:17:3:14:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:37:49:15:34:49:100%:99:3.925E-29:0:0:0:0:49 1/1:38:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:37:35:11:24:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:55:9:46:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:36:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:36:5:31:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:37:36:10:26:36:100%:99:2.2598E-21:0:0:0:0:43 1/1:38:37:9:28:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:34:9:25:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:35:6:29:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:38 1/1:38:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:36:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:38:12:26:39:97.44%:99:1.4697E-21:37:1:0:1:41 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:39:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:22:5:17:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:37:35:6:29:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 4338595 . GT G . PASS AC=300;AF=1.00;AN=300;ANN=G|intergenic_region|MODIFIER|whiB6_Rv3862c-Rv3863_Rv3863|gene3945-gene3946|intergenic_region|gene3945-gene3946|||n.4338596delT||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:20:13:7:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:32:20:12:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:34:16:18:35:97.14%:99:3.2089E-19:60:1:0:1:35 1/1:44:50:27:23:49:98.04%:99:9.9117E-30:0:0:0:0:50 1/1:54:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:55:26:29:56:98.21%:99:1.4593E-31:34:1:0:1:56 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:39:19:20:41:95.12%:99:2.1258E-21:32:2:0:2:41 1/1:49:26:13:13:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:25:12:13:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:30:14:16:31:96.77%:99:6.8754E-17:60:1:1:0:31 1/1:44:30:16:14:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:40:19:21:37:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:37:23:14:38:97.37%:99:5.6582E-21:34:1:0:1:38 1/1:44:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:19:7:12:20:95%:98:1.5234E-10:60:1:1:0:20 1/1:44:23:10:13:24:95.83%:99:7.7525E-13:37:1:1:0:24 1/1:47:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:51:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:40:19:21:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:19:11:31:96.77%:99:6.8754E-17:33:1:1:0:31 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:69:34:35:68:100%:99:4.233E-41:0:0:0:0:69 1/1:45:43:19:24:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:28:17:11:31:90.32%:99:1.2857E-14:33:3:1:2:31 1/1:43:39:22:17:37:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:29:12:17:29:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:46:21:10:11:21:95.45%:99:1.0931E-11:34:1:0:1:22 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:40:22:18:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:29:15:14:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:21:16:39:94.87%:99:5.6582E-21:33:1:0:1:39 1/1:48:38:23:15:39:97.44%:99:1.4697E-21:33:1:0:1:39 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:51:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:46:37:19:18:38:97.37%:99:5.6582E-21:35:1:1:0:39 1/1:40:37:21:16:37:97.37%:99:5.6582E-21:33:1:0:1:38 1/1:44:32:20:12:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:45:27:18:43:100%:99:9.6314E-27:0:0:0:0:45 1/1:49:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:40:20:20:40:97.56%:99:9.8874E-23:32:1:1:0:41 1/1:54:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:20:16:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:55:27:28:58:94.83%:99:5.8604E-30:42:3:1:2:58 1/1:42:34:14:20:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:46:21:25:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:53:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:40:17:23:39:97.56%:99:9.8874E-23:60:1:0:1:41 1/1:48:48:25:23:47:100%:99:1.554E-28:0:0:0:0:48 1/1:53:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:52:38:19:19:39:97.44%:99:1.4697E-21:33:1:1:0:39 1/1:42:37:22:15:37:94.87%:99:3.0128E-20:46:2:0:2:39 1/1:45:26:17:9:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:31:10:21:32:96.88%:99:1.8007E-17:33:1:0:1:32 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:39:17:22:38:97.5%:99:3.8137E-22:35:1:0:1:40 1/1:47:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:21:19:41:97.56%:99:9.8874E-23:32:1:1:0:41 1/1:41:31:17:14:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:26:12:14:27:96.3%:99:1.4382E-14:60:1:1:0:27 1/1:47:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:49:26:14:12:27:96.3%:99:1.4382E-14:60:1:0:1:27 1/1:48:41:18:23:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:49:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:51:24:27:52:98.08%:99:3.3479E-29:34:1:0:1:52 1/1:46:34:19:15:35:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:44:28:13:15:29:96.55%:99:9.9776E-16:32:1:1:0:29 1/1:46:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:38:16:22:38:97.44%:99:1.4697E-21:60:1:1:0:39 1/1:43:45:21:24:43:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:40:19:21:41:97.56%:99:9.8874E-23:33:1:1:0:41 1/1:46:54:32:22:53:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:37:19:18:38:97.37%:99:5.6582E-21:37:1:0:1:38 1/1:48:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:31:16:15:32:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:43:20:23:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:25:16:9:25:96.15%:99:5.4444E-14:37:1:1:0:26 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:46:24:22:47:97.87%:99:2.9526E-26:37:1:1:0:47 1/1:43:41:13:28:42:97.62%:99:2.5612E-23:33:1:1:0:42 1/1:43:59:36:23:59:98.33%:99:6.3137E-34:32:1:0:1:60 1/1:41:40:21:19:37:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:46:22:24:46:97.87%:99:2.9526E-26:34:1:0:1:47 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:69:41:28:70:98.57%:99:7.5676E-40:26:1:1:0:70 1/1:45:56:31:25:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:12:13:26:96.15%:99:5.4444E-14:30:1:1:0:26 1/1:40:36:23:13:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:18:18:35:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:39:14:25:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:42:23:19:41:97.67%:99:6.6289E-24:36:1:1:0:43 1/1:43:45:20:25:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:56:28:28:53:98.25%:99:3.7452E-32:32:1:0:1:57 1/1:41:35:19:16:34:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:44:27:17:44:97.78%:99:4.4304E-25:34:1:0:1:45 1/1:40:31:14:17:30:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:39:57:29:28:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:41:45:21:24:44:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:24:8:16:23:100%:99:3.101E-14:0:0:0:0:24 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:22:20:41:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:45:17:28:46:97.83%:99:1.1441E-25:34:1:1:0:46 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:46:38:19:19:36:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:42:26:16:39:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:48:22:26:48:97.96%:99:1.9625E-27:33:1:1:0:49 MTB_anc 4340006 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|Rv3863_Rv3863|gene3946|transcript|Transcript_gene3946|Coding|1/1|c.1158A>C|p.Ala386Ala|1158/1179|1158/1179|386/392||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.4340006A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4340006A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:50:31:19:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:22:16:6:23:95.65%:99:2.9149E-12:37:1:0:1:23 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:60 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:51:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:18:8:10:19:94.74%:92:5.6585E-10:60:1:0:1:21 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:16 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:50:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:49:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:27:12:15:29:93.1%:99:1.5465E-14:48:2:1:1:29 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:66:29:37:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:45:57:30:27:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:46:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:45:30:15:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:49:25:24:50:98%:99:5.0549E-28:60:1:0:1:51 1/1:47:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:46:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:27:13:14:28:96.43%:99:3.7915E-15:33:1:1:0:29 1/1:48:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:51:20:31:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:47:19:28:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:30:16:14:31:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:47:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:60 1/1:44:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:48:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:12:5:7:12:100%:64:3.698E-7:0:0:0:0:13 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:42:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:42:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:49:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:48:18:30:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:48:30:18:48:100%:99:1.554E-28:0:0:0:0:51 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:39:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:40:49:24:25:49:100%:99:3.925E-29:0:0:0:0:52 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:57:36:21:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:40:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 MTB_anc 4354329 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|synonymous_variant|LOW|espI_Rv3876|gene3959|transcript|Transcript_gene3959|Coding|1/1|c.1320G>C|p.Thr440Thr|1320/2001|1320/2001|440/666||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4354329G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4354329G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:52:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:51:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:48:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:61:20:41:61:100%:99:2.609E-36:0:0:0:0:61 1/1:52:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:47:12:35:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:48:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:53:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:47:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:48:23:25:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:31:13:18:32:96.88%:99:2.1486E-18:0:0:0:0:33 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:51:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:46:35:10:25:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:44:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:19:12:7:20:95%:99:2.8292E-11:0:0:0:0:21 1/1:47:49:20:29:49:100%:99:3.925E-29:0:0:0:0:49 1/1:50:41:19:22:42:97.62%:99:2.5612E-23:34:1:1:0:42 1/1:52:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:26:6:20:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:49:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:53:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:48:23:25:48:100%:99:1.554E-28:0:0:0:0:50 1/1:44:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:41:53:30:23:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:63:33:30:63:100%:99:1.657E-37:0:0:0:0:63 1/1:41:41:13:28:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:38 1/1:40:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:40:19:21:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:43:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:60:30:30:60:100%:99:1.035E-35:0:0:0:0:60 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 MTB_anc 4354926 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|espI_Rv3876|gene3959|transcript|Transcript_gene3959|Coding|1/1|c.1917C>G|p.Asp639Glu|1917/2001|1917/2001|639/666||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4354926C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4354926C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:47:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:48:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:47:29:12:17:30:96.67%:99:2.6212E-16:60:1:1:0:30 1/1:48:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:52:20:32:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:49:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:52:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:47:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:50:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:49:26:23:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:48:30:15:15:31:96.77%:99:6.8754E-17:37:1:0:1:31 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:40:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:58:27:31:59:98.31%:99:2.4634E-33:60:1:0:1:60 1/1:41:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:42:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:58 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:45 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:52:37:15:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:42:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:52:26:26:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 4357123 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|espJ_Rv3878|gene3961|transcript|Transcript_gene3961|Coding|1/1|c.431C>A|p.Thr144Lys|431/843|431/843|144/280||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4357123C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4357123C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:24:17:7:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:44:56:33:23:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:47:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:54:30:24:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:46:45:17:28:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:59:29:30:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:44:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:48:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:66:33:33:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:48:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:51:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:51:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:50:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:52:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:44:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:41:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:45:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:43:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:42:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:35:11:24:36:97.22%:99:8.9137E-21:0:0:0:0:38 1/1:39:48:20:28:48:100%:99:1.554E-28:0:0:0:0:50 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:42:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:44:24:20:45:97.78%:99:3.8097E-26:0:0:0:0:48 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 MTB_anc 4359135 . T C . PASS AC=3;AF=0.500;AN=6;ANN=C|synonymous_variant|LOW|espK_Rv3879c|gene3962|transcript|Transcript_gene3962|Coding|1/1|c.648A>G|p.Pro216Pro|648/2190|648/2190|216/729||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4359135T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4359135T>C||||||;HET=1;HOM=0;NC=0;WT=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:48:8:6:2:17:47.06%:28:1.3389E-3:45:9:2:7:17 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:39:8:4:4:21:38.1%:27:1.638E-3:48:12:5:7:21 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 0/1:37:7:3:4:21:33.33%:25:3.1609E-3:45:8:5:3:21 ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. MTB_anc 4359135 . T TGGGGTTCCCGGGGTGATCGGGGTTCCCGGCGTGATC . PASS AC=135;AF=0.466;AN=290;ANN=TGGGGTTCCCGGGGTGATCGGGGTTCCCGGCGTGATC|disruptive_inframe_insertion|MODERATE|espK_Rv3879c|gene3962|transcript|Transcript_gene3962|Coding|1/1|c.612_647dupGATCACGCCGGGAACCCCGATCACCCCGGGAACCCC|p.Pro216_Ile217insIleThrProGlyThrProIleThrProGlyThrPro|647/2190|647/2190|216/729||,TGGGGTTCCCGGGGTGATCGGGGTTCCCGGCGTGATC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4359135_4359136insGGGGTTCCCGGGGTGATCGGGGTTCCCGGCGTGATC||||||,TGGGGTTCCCGGGGTGATCGGGGTTCCCGGCGTGATC|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4359135_4359136insGGGGTTCCCGGGGTGATCGGGGTTCCCGGCGTGATC||||||;HOM=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:44:24:12:12:40:60%:94:3.8741E-10:39:16:8:8:40 0/1:45:6:1:5:12:50%:21:6.865E-3:48:6:2:4:12 0/1:47:21:8:13:41:51.22%:78:1.4682E-8:37:20:8:12:41 0/1:47:9:7:2:26:34.62%:30:8.1542E-4:45:16:7:9:26 0/1:46:13:4:9:21:61.9%:51:6.4422E-6:47:7:2:5:21 0/1:44:7:4:3:13:53.85%:26:2.2883E-3:46:5:1:4:14 0/1:50:7:1:6:17:41.18%:24:3.3988E-3:47:9:4:5:17 0/1:46:7:3:4:16:43.75%:25:2.8986E-3:39:7:4:3:16 0/1:52:6:2:4:14:42.86%:20:7.971E-3:46:8:3:5:14 0/1:42:10:1:9:21:47.62%:36:2.3971E-4:44:11:4:7:21 0/0:49:4:3:1:18:22.22%:8:5.0612E-2:52:12:6:6:19 0/1:41:10:5:5:26:38.46%:34:3.3576E-4:39:16:8:8:27 ./. 0/1:45:18:9:9:30:60%:70:9.3503E-8:43:12:5:7:30 0/1:41:15:8:7:31:48.39%:54:3.2298E-6:38:16:7:9:31 0/1:49:12:8:4:36:33.33%:43:4.6796E-5:41:14:9:5:37 0/1:49:7:3:4:17:41.18%:24:3.6151E-3:42:10:5:5:17 0/1:43:7:5:2:16:41.18%:24:3.3988E-3:36:9:4:5:17 0/1:41:6:3:3:10:60%:22:5.418E-3:43:4:3:1:10 0/1:41:6:4:2:12:50%:21:6.865E-3:41:6:3:3:12 0/1:49:9:3:6:19:47.37%:32:5.667E-4:44:10:5:5:20 0/1:47:16:5:11:29:55.17%:60:8.4872E-7:40:13:3:10:29 0/1:44:13:10:3:26:50%:48:1.2938E-5:41:11:3:8:26 0/1:39:8:4:4:21:36.36%:27:1.7241E-3:47:13:7:6:22 0/1:36:7:3:4:21:33.33%:23:4.3101E-3:38:14:5:9:21 ./. 0/1:43:9:8:1:22:40.91%:31:7.0165E-4:41:13:3:10:22 0/0:48:4:2:2:11:36.36%:3:4.3344E-2:47:6:2:4:11 0/1:50:7:5:2:14:50%:27:1.935E-3:49:4:2:2:14 0/1:50:11:4:7:20:55%:41:7.2653E-5:43:9:3:6:20 0/1:44:8:4:4:22:36.36%:27:1.8042E-3:43:14:8:6:22 0/1:40:8:3:5:16:50%:29:1.2236E-3:48:8:3:5:16 0/1:47:13:3:10:29:44.83%:46:2.1506E-5:51:16:4:12:29 0/1:44:6:1:5:16:37.5%:20:8.4291E-3:47:9:4:5:17 0/1:52:11:7:4:27:40.74%:38:1.362E-4:47:16:9:7:27 0/1:45:11:5:6:26:42.31%:39:1.1933E-4:38:14:3:11:27 0/1:32:6:3:3:15:37.5%:20:8.4291E-3:49:9:3:6:16 0/1:45:22:13:9:44:50%:82:6.1932E-9:45:21:8:13:45 0/1:48:11:9:2:27:40.74%:38:1.362E-4:41:16:6:10:27 0/1:47:12:4:8:27:44.44%:42:5.0681E-5:42:15:10:5:27 0/1:37:14:5:9:39:35.9%:50:8.3837E-6:42:16:8:8:39 0/1:47:7:4:3:15:46.67%:25:3.1609E-3:37:8:5:3:15 0/1:41:6:5:1:17:35.29%:20:9.2021E-3:39:11:3:8:18 0/1:46:8:5:3:21:38.1%:27:1.638E-3:38:12:5:7:21 0/1:46:11:8:3:22:50%:40:9.1981E-5:37:11:5:6:22 0/1:49:13:5:8:31:41.94%:46:2.3178E-5:44:17:11:6:32 0/1:44:9:5:4:32:28.12%:29:1.0185E-3:44:23:11:12:32 0/1:51:9:5:4:21:42.86%:32:6.1425E-4:43:11:4:7:22 0/1:52:12:6:6:27:44.44%:43:4.6796E-5:36:14:4:10:28 0/1:51:14:3:11:37:37.84%:48:1.2704E-5:41:22:13:9:37 0/0:41:5:2:3:13:38.46%:3:1.8634E-2:43:7:4:3:13 0/0:43:4:2:2:30:13.33%:26:5.5981E-2:44:25:11:14:31 0/1:44:13:8:5:19:65%:51:6.4422E-6:39:7:2:5:20 0/1:46:17:11:6:31:54.84%:65:3.0928E-7:42:13:6:7:31 0/1:50:7:6:1:22:31.82%:23:4.3101E-3:43:14:3:11:22 0/1:49:9:3:6:18:50%:32:5.1645E-4:37:9:3:6:18 0/0:60:2:1:1:16:12.5%:15:2.4194E-1:39:14:7:7:16 0/1:40:8:4:4:20:40%:27:1.638E-3:43:12:5:7:20 0/1:43:14:8:6:21:63.64%:55:2.7817E-6:39:8:4:4:22 0/1:53:20:9:11:32:62.5%:79:1.1508E-8:46:12:6:6:32 0/1:48:6:3:3:15:40%:20:7.971E-3:44:8:4:4:15 0/1:42:14:8:6:28:50%:51:6.911E-6:43:14:10:4:28 0/1:43:11:6:5:27:40.74%:38:1.362E-4:38:16:10:6:28 0/1:47:14:6:8:30:46.67%:50:8.3837E-6:41:16:10:6:31 0/1:52:17:7:10:28:60.71%:66:2.1913E-7:40:11:2:9:28 0/1:48:32:17:15:43:74.42%:99:5.8981E-15:41:9:1:8:43 0/1:47:11:6:5:16:68.75%:44:3.3854E-5:37:5:1:4:17 0/1:47:12:6:6:30:40%:42:5.4482E-5:44:16:12:4:30 0/0:46:5:2:3:17:29.41%:6:2.1073E-2:43:10:7:3:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:48:15:3:12:27:55.56%:56:2.0087E-6:41:12:6:6:28 0/1:53:7:7:0:16:43.75%:24:3.3988E-3:44:9:3:6:16 0/1:46:8:2:6:15:53.33%:29:1.0995E-3:49:7:4:3:15 0/1:44:11:8:3:27:40.74%:38:1.362E-4:44:16:5:11:27 0/1:40:8:1:7:27:29.63%:26:2.1337E-3:38:19:7:12:27 0/0:51:5:2:3:17:29.41%:8:2.2239E-2:47:12:6:6:18 ./. 0/1:48:10:5:5:22:45.45%:36:2.3971E-4:43:11:6:5:23 0/1:46:9:4:5:22:40.91%:31:7.0165E-4:43:13:6:7:22 0/1:38:8:1:7:13:61.54%:31:6.7304E-4:38:4:2:2:13 0/1:41:6:0:6:20:30%:20:9.828E-3:38:13:6:7:20 0/1:44:11:7:4:24:45.83%:39:1.1047E-4:40:13:6:7:24 0/1:48:12:6:6:30:40%:42:5.8193E-5:46:17:5:12:30 0/1:44:13:9:4:18:72.22%:54:3.7078E-6:46:5:1:4:18 0/1:45:9:7:2:29:31.03%:30:9.4048E-4:42:20:9:11:29 0/1:47:9:2:7:19:47.37%:32:5.1645E-4:39:9:2:7:20 0/1:45:12:7:5:27:44.44%:43:4.6796E-5:41:14:4:10:28 0/1:52:9:3:6:15:60%:35:2.8986E-4:46:5:1:4:16 0/1:47:9:6:3:21:42.86%:31:6.592E-4:39:12:5:7:21 0/1:45:17:10:7:33:51.52%:63:4.1013E-7:47:15:6:9:34 0/1:49:14:8:6:28:50%:51:6.911E-6:41:14:4:10:29 0/0:52:3:1:2:16:18.75%:11:1.129E-1:47:13:3:10:16 0/1:46:17:9:8:37:45.95%:61:6.9312E-7:40:20:11:9:39 0/1:46:8:5:3:13:61.54%:30:8.238E-4:41:5:3:2:13 0/1:46:15:9:6:32:46.88%:54:3.2298E-6:38:16:6:10:32 0/1:46:10:4:6:19:52.63%:37:1.9541E-4:36:9:3:6:19 0/1:40:8:3:5:21:38.1%:27:1.7241E-3:37:13:10:3:22 0/1:45:23:13:10:44:52.27%:86:2.3136E-9:42:21:11:10:45 0/1:42:18:12:6:29:62.07%:71:7.6888E-8:38:11:2:9:29 0/1:47:11:7:4:22:50%:40:8.2399E-5:37:10:3:7:22 0/1:41:6:1:5:14:42.86%:20:7.971E-3:42:8:4:4:14 0/1:47:11:6:5:28:39.29%:38:1.362E-4:46:16:8:8:28 0/1:43:10:6:4:20:50%:37:1.9541E-4:36:9:7:2:21 0/1:44:9:5:4:21:42.86%:31:6.592E-4:38:12:6:6:22 0/1:46:11:2:9:19:57.89%:42:5.2969E-5:40:7:2:5:19 0/1:46:18:7:11:28:62.07%:71:7.6888E-8:43:11:4:7:29 0/1:47:11:5:6:22:50%:40:8.2399E-5:41:10:6:4:22 0/1:48:11:7:4:25:44%:39:1.1933E-4:43:14:6:8:25 0/1:47:16:4:12:28:57.14%:62:6.1806E-7:39:11:6:5:29 0/1:47:14:6:8:33:42.42%:49:1.0577E-5:39:19:7:12:33 0/1:41:12:5:7:24:50%:44:3.4748E-5:39:11:6:5:25 0/1:52:9:7:2:18:50%:33:4.6348E-4:43:8:0:8:18 0/1:42:14:4:10:25:56%:53:4.7528E-6:43:11:5:6:25 0/1:48:15:7:8:25:60%:58:1.4522E-6:43:10:7:3:25 0/1:43:8:6:2:25:32%:27:1.949E-3:37:16:7:9:26 0/1:37:14:4:10:31:45.16%:50:8.3837E-6:40:16:5:11:32 0/1:42:14:7:7:27:51.85%:52:6.1806E-6:36:13:3:10:27 0/1:51:18:11:7:32:56.25%:68:1.3089E-7:35:14:2:12:32 0/1:52:9:5:4:16:56.25%:33:4.0786E-4:40:7:3:4:16 0/1:40:15:8:7:25:60%:60:9.5813E-7:42:8:8:0:25 0/1:47:10:7:3:18:55.56%:37:1.7215E-4:35:8:5:3:18 0/1:45:16:7:9:23:69.57%:67:1.7905E-7:36:6:3:3:24 0/1:42:9:2:7:18:50%:32:5.1645E-4:40:9:5:4:18 0/0:37:4:2:2:16:23.53%:11:5.132E-2:38:13:4:9:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:8 0/1:38:8:3:5:19:40%:28:1.5455E-3:35:11:8:3:20 0/1:44:10:6:4:22:45.45%:35:2.6061E-4:36:12:6:6:22 0/1:44:14:9:5:17:82.35%:63:4.8851E-7:35:3:1:2:18 0/1:43:8:2:6:19:42.11%:28:1.5455E-3:36:11:2:9:19 0/1:44:6:1:5:14:42.86%:20:7.971E-3:41:8:4:4:14 0/1:41:11:5:6:20:55%:41:7.2653E-5:39:9:4:5:20 0/1:42:10:8:2:18:55.56%:38:1.4831E-4:36:7:3:4:18 0/1:48:12:6:6:18:66.67%:48:1.4831E-5:40:6:2:4:18 0/1:43:11:6:5:21:52.38%:40:8.2399E-5:34:10:6:4:22 0/1:45:6:3:3:9:66.67%:23:4.5249E-3:36:3:0:3:9 0/1:46:13:5:8:26:50%:49:1.1242E-5:40:10:5:5:26 0/1:43:11:8:3:34:32.35%:37:1.6659E-4:36:20:5:15:34 0/1:50:11:7:4:25:44%:39:1.1047E-4:38:13:5:8:25 0/1:43:14:9:5:32:43.75%:50:8.3837E-6:38:16:4:12:32 0/1:41:15:9:6:25:60%:58:1.4522E-6:39:10:2:8:25 0/1:46:15:4:11:28:53.57%:56:2.0087E-6:39:12:3:9:28 0/0:37:6:4:2:20:30%:7:1.0098E-2:41:14:7:7:21 0/1:41:10:2:8:26:38.46%:35:2.9985E-4:40:14:6:8:26 0/1:39:16:6:10:27:59.26%:63:4.1493E-7:40:9:3:6:27 0/1:39:13:10:3:24:54.17%:50:9.5813E-6:39:9:7:2:24 0/1:39:11:3:8:21:50%:40:9.1981E-5:40:11:7:4:22 0/1:46:8:4:4:24:33.33%:27:1.8042E-3:43:14:6:8:24 0/1:51:11:7:4:31:35.48%:37:1.594E-4:40:19:13:6:31 0/1:47:9:6:3:25:34.62%:30:8.1542E-4:42:16:9:7:26 0/1:40:9:7:2:26:34.62%:30:8.1542E-4:38:16:4:12:27 MTB_anc 4359667 . A C . PASS AC=300;AF=1.00;AN=300;ANN=C|missense_variant|MODERATE|espK_Rv3879c|gene3962|transcript|Transcript_gene3962|Coding|1/1|c.116T>G|p.Leu39Trp|116/2190|116/2190|39/729||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4359667A>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4359667A>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:46:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:49:19:10:9:20:95%:98:1.5234E-10:38:1:0:1:20 1/1:42:59:26:33:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:50:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:49:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:48:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:45:23:16:7:24:95.83%:99:7.7525E-13:38:1:1:0:25 1/1:46:29:17:12:30:96.67%:99:2.6212E-16:38:1:1:0:30 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:71:42:29:71:100%:99:2.6835E-42:0:0:0:0:72 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:64:21:43:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:45:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:49:26:23:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:48:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:14:11:3:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:44:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:50:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:49:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:48:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:48:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:33:16:17:34:97.06%:99:1.2301E-18:38:1:1:0:34 1/1:42:59:32:27:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:44:18:26:45:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:46:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:46:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:48:16:32:48:100%:99:1.554E-28:0:0:0:0:49 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:66:27:39:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:62:28:34:62:100%:99:6.5755E-37:0:0:0:0:63 1/1:40:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:49:20:29:49:100%:99:3.925E-29:0:0:0:0:52 1/1:38:52:25:27:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:40:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:39:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:38:23:15:39:97.44%:99:1.4697E-21:38:1:0:1:39 1/1:39:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:58 1/1:43:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:44:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 4361006 . G T . PASS AC=1;AF=3.333e-03;AN=300;ANN=T|missense_variant|MODERATE|espB_Rv3881c|gene3964|transcript|Transcript_gene3964|Coding|1/1|c.920C>A|p.Ser307Tyr|920/1383|920/1383|307/460||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitro|||n.4361006G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4361006G>T||||||;HOM=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:60:0%:99:1E0:43:60:27:33:60 0/0:0:0:0:0:13:0%:25:1E0:47:13:7:6:14 0/0:0:0:0:0:51:0%:97:1E0:41:51:24:27:51 0/0:0:0:0:0:19:0%:37:1E0:43:19:7:12:20 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:32 0/0:0:0:0:0:30:0%:55:1E0:38:30:14:16:30 0/0:60:1:1:0:40:2.5%:62:5E-1:45:39:23:16:40 0/0:0:0:0:0:17:0%:33:1E0:45:17:9:8:18 0/0:0:0:0:0:20:0%:36:1E0:42:20:12:8:21 0/0:60:1:0:1:33:3.03%:52:5E-1:49:32:16:16:34 0/0:0:0:0:0:29:0%:55:1E0:38:29:17:12:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:17:19:36 0/0:0:0:0:0:15:0%:29:1E0:42:15:8:7:15 0/0:0:0:0:0:40:0%:74:1E0:48:40:16:24:42 0/0:0:0:0:0:24:0%:44:1E0:48:24:11:13:24 0/0:0:0:0:0:36:0%:66:1E0:40:36:19:17:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:12:11:24 0/0:0:0:0:0:17:0%:33:1E0:38:17:5:12:17 0/0:0:0:0:0:13:0%:25:1E0:41:13:9:4:13 0/0:0:0:0:0:23:0%:44:1E0:46:23:16:7:23 0/0:0:0:0:0:30:0%:55:1E0:39:30:11:19:31 0/0:37:1:1:0:50:2%:80:5E-1:43:49:23:26:54 0/0:0:0:0:0:33:0%:63:1E0:44:33:18:15:33 0/0:0:0:0:0:26:0%:47:1E0:41:26:10:16:27 0/0:0:0:0:0:26:0%:47:1E0:45:26:12:14:27 0/0:0:0:0:0:21:0%:40:1E0:46:21:6:15:21 0/0:0:0:0:0:28:0%:51:1E0:41:28:13:15:29 0/0:0:0:0:0:15:0%:29:1E0:35:15:9:6:15 0/0:0:0:0:0:29:0%:55:1E0:41:29:12:17:30 0/0:0:0:0:0:25:0%:48:1E0:41:25:12:13:26 0/0:0:0:0:0:28:0%:51:1E0:45:28:15:13:28 0/0:0:0:0:0:35:0%:67:1E0:42:35:14:21:35 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:29 0/0:0:0:0:0:26:0%:47:1E0:47:26:16:10:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:15:18:34 0/0:0:0:0:0:30:0%:55:1E0:45:30:15:15:30 0/0:0:0:0:0:40:0%:74:1E0:43:40:20:20:40 0/0:0:0:0:0:54:0%:99:1E0:44:54:34:20:57 0/1:42:32:20:12:39:82.05%:99:1.9666E-15:44:7:5:2:39 0/0:0:0:0:0:41:0%:78:1E0:39:41:19:22:41 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:34:0%:62:1E0:46:34:23:11:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:25 0/0:0:0:0:0:25:0%:48:1E0:44:25:14:11:25 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:37:0%:70:1E0:38:37:16:21:41 0/0:0:0:0:0:38:0%:70:1E0:40:38:21:17:38 0/0:39:1:1:0:35:2.86%:55:5E-1:41:34:22:12:35 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 0/0:0:0:0:0:44:0%:81:1E0:42:44:17:27:44 0/0:0:0:0:0:23:0%:44:1E0:45:23:12:11:23 0/0:0:0:0:0:22:0%:40:1E0:42:22:13:9:22 0/0:0:0:0:0:28:0%:51:1E0:44:28:17:11:28 0/0:0:0:0:0:39:0%:74:1E0:41:39:20:19:41 0/0:0:0:0:0:33:0%:63:1E0:42:33:14:19:34 0/0:0:0:0:0:25:0%:48:1E0:42:25:11:14:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:23:11:35 0/0:60:1:0:1:37:2.7%:59:5E-1:44:36:19:17:39 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:22:8:30 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:34 0/0:0:0:0:0:54:0%:99:1E0:42:54:31:23:55 0/0:0:0:0:0:36:0%:66:1E0:39:36:13:23:36 0/0:0:0:0:0:41:0%:78:1E0:47:41:18:23:42 0/0:0:0:0:0:18:0%:32:1E0:42:18:6:12:18 0/0:60:1:1:0:23:4.35%:34:5E-1:43:22:12:10:23 0/0:0:0:0:0:23:0%:44:1E0:44:23:12:11:24 0/0:0:0:0:0:27:0%:52:1E0:44:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:35 0/0:0:0:0:0:48:0%:89:1E0:43:48:21:27:51 0/0:0:0:0:0:30:0%:55:1E0:43:30:11:19:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:15:12:28 0/0:0:0:0:0:31:0%:59:1E0:44:31:18:13:33 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:43 0/0:0:0:0:0:24:0%:44:1E0:42:24:11:13:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:34 0/0:0:0:0:0:52:0%:96:1E0:43:52:25:27:54 0/0:0:0:0:0:26:0%:47:1E0:44:26:14:12:26 0/0:0:0:0:0:21:0%:40:1E0:49:21:5:16:21 0/0:0:0:0:0:21:0%:40:1E0:42:21:11:10:21 0/0:0:0:0:0:23:0%:44:1E0:38:23:13:10:24 0/0:37:1:1:0:29:3.45%:45:5E-1:39:28:13:15:29 0/0:0:0:0:0:16:0%:29:1E0:45:16:8:8:16 0/0:0:0:0:0:30:0%:55:1E0:42:30:12:18:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:17:0%:33:1E0:40:17:10:7:17 0/0:0:0:0:0:49:0%:93:1E0:41:49:25:24:49 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:32 0/0:0:0:0:0:52:0%:96:1E0:40:52:25:27:54 0/0:0:0:0:0:32:0%:59:1E0:42:32:13:19:33 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:37:0%:70:1E0:40:37:21:16:37 0/0:0:0:0:0:40:0%:74:1E0:41:40:22:18:40 0/0:0:0:0:0:24:0%:44:1E0:41:24:17:7:24 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:34 0/0:35:1:0:1:24:4.17%:34:5E-1:39:23:13:10:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:15:13:28 0/0:0:0:0:0:23:0%:44:1E0:44:23:19:4:23 0/0:0:0:0:0:36:0%:66:1E0:43:36:17:19:36 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:35 0/0:0:0:0:0:36:0%:66:1E0:42:36:19:17:36 0/0:0:0:0:0:30:0%:55:1E0:46:30:18:12:30 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:33 0/0:0:0:0:0:30:0%:55:1E0:38:30:16:14:31 0/0:0:0:0:0:28:0%:51:1E0:43:28:20:8:30 0/0:0:0:0:0:19:0%:37:1E0:36:19:10:9:22 0/0:0:0:0:0:34:0%:62:1E0:45:34:21:13:34 0/0:0:0:0:0:27:0%:52:1E0:38:27:10:17:30 0/0:0:0:0:0:40:0%:74:1E0:37:40:18:22:45 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:33 0/0:0:0:0:0:33:0%:63:1E0:41:33:17:16:35 0/0:0:0:0:0:31:0%:59:1E0:38:31:12:19:34 0/0:0:0:0:0:55:0%:99:1E0:40:55:32:23:55 0/0:0:0:0:0:52:0%:96:1E0:41:52:29:23:52 0/0:0:0:0:0:23:0%:44:1E0:39:23:16:7:23 0/0:0:0:0:0:14:0%:25:1E0:39:14:6:8:15 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:34 0/0:0:0:0:0:24:0%:44:1E0:38:24:9:15:27 0/0:0:0:0:0:45:0%:85:1E0:37:45:30:15:45 0/0:0:0:0:0:35:0%:67:1E0:37:35:12:23:37 0/0:0:0:0:0:42:0%:77:1E0:39:42:24:18:45 0/0:0:0:0:0:32:0%:59:1E0:40:32:15:17:32 0/0:0:0:0:0:34:0%:62:1E0:37:34:22:12:35 0/0:0:0:0:0:38:0%:70:1E0:39:38:19:19:39 0/0:0:0:0:0:33:0%:63:1E0:38:33:21:12:35 0/0:0:0:0:0:22:0%:40:1E0:39:22:17:5:24 0/0:0:0:0:0:33:0%:63:1E0:40:33:22:11:33 0/0:0:0:0:0:23:0%:44:1E0:36:23:9:14:25 0/0:0:0:0:0:31:0%:59:1E0:39:31:11:20:32 0/0:0:0:0:0:63:0%:99:1E0:38:63:27:36:65 0/0:0:0:0:0:42:0%:77:1E0:41:42:24:18:43 0/0:0:0:0:0:41:0%:78:1E0:42:41:21:20:42 0/0:0:0:0:0:55:0%:99:1E0:41:55:24:31:57 0/0:0:0:0:0:37:0%:70:1E0:39:37:18:19:38 0/0:0:0:0:0:28:0%:51:1E0:39:28:14:14:29 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:44 0/0:0:0:0:0:46:0%:85:1E0:39:46:29:17:46 0/0:0:0:0:0:15:0%:29:1E0:41:15:9:6:15 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:44:0%:81:1E0:40:44:20:24:44 0/0:0:0:0:0:60:0%:99:1E0:42:60:32:28:62 0/0:0:0:0:0:26:0%:47:1E0:37:26:15:11:30 MTB_anc 4367649 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|synonymous_variant|LOW|eccE2_Rv3885c|gene3968|transcript|Transcript_gene3968|Coding|1/1|c.873C>T|p.Tyr291Tyr|873/1614|873/1614|291/537||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4367649G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4367649G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:48:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:48:29:19:48:100%:99:1.554E-28:0:0:0:0:49 1/1:47:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:47:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:52:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:48:25:4:21:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:55:19:36:55:100%:99:1.0149E-32:0:0:0:0:57 1/1:44:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:66:26:40:66:100%:99:2.6498E-39:0:0:0:0:68 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:53:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:53:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:49:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:59:31:28:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:47:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:57:32:25:57:100%:99:6.4572E-34:0:0:0:0:59 1/1:43:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:43:51:19:32:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:45:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:48:17:31:48:100%:99:1.554E-28:0:0:0:0:48 1/1:51:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:45:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:55:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:50:22:28:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:49:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:60:32:28:60:100%:99:1.035E-35:0:0:0:0:60 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:48:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:41:28:13:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:63:31:32:63:100%:99:1.657E-37:0:0:0:0:64 1/1:40:55:31:24:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:40:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:46:16:30:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:40:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:58 1/1:40:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:73:33:40:73:100%:99:1.7006E-43:0:0:0:0:73 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:36:25:11:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:43:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:52:24:28:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:37 MTB_anc 4368881 . C T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|synonymous_variant|LOW|mycP2_Rv3886c|gene3969|transcript|Transcript_gene3969|Coding|1/1|c.1290G>A|p.Pro430Pro|1290/1653|1290/1653|430/550||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4368881C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4368881C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:44:56:26:30:56 0/0:0:0:0:0:25:0%:48:1E0:51:25:19:6:25 0/0:0:0:0:0:58:0%:99:1E0:46:58:32:26:58 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:24 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:23 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:26:0%:47:1E0:47:26:11:15:26 0/0:0:0:0:0:21:0%:40:1E0:45:21:9:12:21 0/0:0:0:0:0:35:0%:67:1E0:49:35:22:13:35 0/0:0:0:0:0:34:0%:62:1E0:51:34:15:19:34 0/0:0:0:0:0:34:0%:62:1E0:47:34:18:16:34 0/0:0:0:0:0:43:0%:82:1E0:47:43:17:26:44 0/0:0:0:0:0:27:0%:52:1E0:48:27:10:17:27 0/0:0:0:0:0:58:0%:99:1E0:45:58:25:33:58 0/0:0:0:0:0:22:0%:40:1E0:48:22:15:7:22 0/0:0:0:0:0:38:0%:70:1E0:47:38:15:23:38 0/0:0:0:0:0:19:0%:37:1E0:45:19:8:11:19 0/0:0:0:0:0:25:0%:48:1E0:49:25:12:13:26 0/0:0:0:0:0:38:0%:70:1E0:48:38:21:17:38 0/0:0:0:0:0:28:0%:51:1E0:48:28:13:15:28 0/0:0:0:0:0:29:0%:55:1E0:46:29:16:13:29 0/0:0:0:0:0:45:0%:85:1E0:41:45:26:19:45 0/0:0:0:0:0:36:0%:66:1E0:49:36:16:20:36 0/0:0:0:0:0:34:0%:62:1E0:47:34:16:18:34 0/0:39:1:1:0:37:2.7%:59:5E-1:43:36:18:18:37 0/0:0:0:0:0:12:0%:21:1E0:37:12:6:6:12 0/0:0:0:0:0:22:0%:40:1E0:43:22:14:8:22 0/0:0:0:0:0:17:0%:33:1E0:49:17:8:9:18 0/0:0:0:0:0:30:0%:55:1E0:46:30:19:11:30 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:29 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:25:0%:48:1E0:45:25:14:11:25 0/0:0:0:0:0:30:0%:55:1E0:50:30:16:14:31 0/0:0:0:0:0:29:0%:55:1E0:44:29:10:19:29 0/0:38:1:1:0:27:3.7%:41:5E-1:47:26:14:12:27 0/0:0:0:0:0:26:0%:47:1E0:43:26:13:13:26 0/0:0:0:0:0:39:0%:74:1E0:46:39:19:20:39 0/0:0:0:0:0:58:0%:99:1E0:47:58:25:33:58 0/0:0:0:0:0:58:0%:99:1E0:44:58:31:27:59 0/0:0:0:0:0:48:0%:89:1E0:46:48:23:25:48 0/0:0:0:0:0:36:0%:66:1E0:45:36:21:15:36 0/0:0:0:0:0:39:0%:74:1E0:41:39:19:20:40 0/0:0:0:0:0:21:0%:40:1E0:42:21:13:8:21 0/0:0:0:0:0:29:0%:55:1E0:42:29:18:11:30 0/0:0:0:0:0:32:0%:59:1E0:45:32:16:16:32 0/0:0:0:0:0:38:0%:70:1E0:45:38:18:20:38 0/0:0:0:0:0:24:0%:44:1E0:48:24:14:10:24 0/0:0:0:0:0:37:0%:70:1E0:41:37:22:15:37 0/0:0:0:0:0:30:0%:55:1E0:45:30:12:18:30 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:22:0%:40:1E0:49:22:15:7:22 1/1:43:42:20:22:44:95.45%:99:3.9431E-23:60:2:0:2:47 0/0:0:0:0:0:20:0%:36:1E0:47:20:6:14:20 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:24:0%:44:1E0:40:24:14:10:24 0/0:0:0:0:0:35:0%:67:1E0:41:35:19:16:35 0/0:0:0:0:0:40:0%:74:1E0:46:40:15:25:42 0/0:0:0:0:0:27:0%:52:1E0:46:27:18:9:27 0/0:0:0:0:0:41:0%:78:1E0:42:41:23:18:41 0/0:0:0:0:0:35:0%:67:1E0:52:35:19:16:35 0/0:0:0:0:0:36:0%:66:1E0:47:36:19:17:36 0/0:0:0:0:0:53:0%:99:1E0:44:53:28:25:53 0/0:0:0:0:0:46:0%:85:1E0:44:46:29:17:47 0/0:0:0:0:0:28:0%:51:1E0:48:28:16:12:28 0/0:0:0:0:0:43:0%:82:1E0:44:43:25:18:44 0/0:0:0:0:0:54:0%:99:1E0:48:54:27:27:55 0/0:0:0:0:0:22:0%:40:1E0:46:22:9:13:22 0/0:0:0:0:0:38:0%:70:1E0:47:38:19:19:38 0/0:0:0:0:0:13:0%:25:1E0:48:13:3:10:13 0/0:0:0:0:0:16:0%:29:1E0:48:16:4:12:17 0/0:0:0:0:0:43:0%:82:1E0:48:43:26:17:44 0/0:0:0:0:0:31:0%:59:1E0:51:31:19:12:31 0/0:60:1:0:1:29:3.45%:45:5E-1:52:28:12:16:29 0/0:0:0:0:0:37:0%:70:1E0:50:37:17:20:37 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:31:0%:59:1E0:49:31:18:13:31 0/0:0:0:0:0:32:0%:59:1E0:43:32:19:13:32 0/0:0:0:0:0:38:0%:70:1E0:49:38:20:18:38 0/0:0:0:0:0:23:0%:44:1E0:43:23:13:10:23 0/0:0:0:0:0:26:0%:47:1E0:45:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:47:27:13:14:27 0/0:0:0:0:0:45:0%:85:1E0:42:45:21:24:45 0/0:0:0:0:0:26:0%:47:1E0:47:26:12:14:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:22:0%:40:1E0:43:22:8:14:22 0/0:0:0:0:0:22:0%:40:1E0:47:22:7:15:23 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:37 0/0:0:0:0:0:24:0%:44:1E0:47:24:11:13:24 0/0:0:0:0:0:30:0%:55:1E0:51:30:17:13:30 0/0:0:0:0:0:30:0%:55:1E0:53:30:16:14:30 0/0:0:0:0:0:52:0%:96:1E0:41:52:28:24:54 0/0:0:0:0:0:32:0%:59:1E0:46:32:15:17:33 0/0:0:0:0:0:57:0%:99:1E0:44:57:28:29:58 0/0:0:0:0:0:29:0%:55:1E0:47:29:14:15:29 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:41:0%:78:1E0:45:41:18:23:42 0/0:0:0:0:0:39:0%:74:1E0:45:39:24:15:40 0/0:0:0:0:0:23:0%:44:1E0:47:23:10:13:23 0/0:0:0:0:0:35:0%:67:1E0:45:35:19:16:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:18:15:34 0/0:0:0:0:0:29:0%:55:1E0:43:29:19:10:29 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:16 0/0:0:0:0:0:33:0%:63:1E0:46:33:13:20:33 0/0:0:0:0:0:34:0%:62:1E0:44:34:13:21:34 0/0:0:0:0:0:48:0%:89:1E0:48:48:26:22:48 0/0:0:0:0:0:35:0%:67:1E0:45:35:14:21:35 0/0:0:0:0:0:34:0%:62:1E0:45:34:14:20:34 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:26 0/0:0:0:0:0:25:0%:48:1E0:44:25:11:14:25 0/0:0:0:0:0:28:0%:51:1E0:40:28:18:10:29 0/0:0:0:0:0:41:0%:78:1E0:44:41:23:18:41 0/0:0:0:0:0:46:0%:85:1E0:43:46:28:18:46 0/0:0:0:0:0:48:0%:89:1E0:41:48:24:24:51 0/0:0:0:0:0:36:0%:66:1E0:42:36:21:15:36 0/0:0:0:0:0:36:0%:66:1E0:45:36:17:19:37 0/0:0:0:0:0:33:0%:63:1E0:42:33:17:16:34 0/0:0:0:0:0:48:0%:89:1E0:43:48:24:24:49 0/0:0:0:0:0:50:0%:92:1E0:41:50:27:23:50 0/0:0:0:0:0:40:0%:74:1E0:43:40:18:22:40 0/0:39:1:0:1:36:2.78%:55:5E-1:43:35:19:16:36 0/0:0:0:0:0:47:0%:89:1E0:39:47:24:23:48 0/0:0:0:0:0:43:0%:82:1E0:41:43:21:22:43 0/0:0:0:0:0:41:0%:78:1E0:41:41:25:16:42 0/0:0:0:0:0:40:0%:74:1E0:38:40:23:17:41 0/0:0:0:0:0:42:0%:77:1E0:40:42:24:18:44 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:45:0%:85:1E0:45:45:22:23:45 0/0:0:0:0:0:33:0%:63:1E0:39:33:18:15:33 0/0:0:0:0:0:40:0%:74:1E0:40:40:18:22:42 0/0:0:0:0:0:42:0%:77:1E0:38:42:18:24:42 0/0:0:0:0:0:43:0%:82:1E0:41:43:17:26:44 0/0:0:0:0:0:32:0%:59:1E0:38:32:13:19:33 0/0:0:0:0:0:34:0%:62:1E0:42:34:18:16:34 0/0:0:0:0:0:65:0%:99:1E0:39:65:29:36:68 0/0:0:0:0:0:58:0%:99:1E0:43:58:28:30:58 0/0:0:0:0:0:48:0%:89:1E0:42:48:26:22:48 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:50 0/0:0:0:0:0:39:0%:74:1E0:43:39:16:23:40 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:31:0%:59:1E0:42:31:18:13:31 0/0:0:0:0:0:35:0%:67:1E0:44:35:13:22:35 0/0:0:0:0:0:52:0%:96:1E0:42:52:32:20:52 0/0:0:0:0:0:21:0%:40:1E0:44:21:8:13:21 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:33 0/0:0:0:0:0:41:0%:78:1E0:43:41:22:19:41 0/0:0:0:0:0:62:0%:99:1E0:43:62:34:28:62 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 MTB_anc 4369613 . CG C . PASS AC=292;AF=0.973;AN=300;ANN=C|frameshift_variant|HIGH|mycP2_Rv3886c|gene3969|transcript|Transcript_gene3969|Coding|1/1|c.557delC|p.Pro186fs|557/1653|557/1653|186/550||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4369614delG||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|intermediary_metabolism_and_respiration|||n.4369614delG||||||;LOF=(mycP2_Rv3886c|gene3969|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:39:23:16:41:92.86%:99:8.4519E-21:33:3:0:3:42 1/1:42:21:13:8:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:41:21:20:39:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:30:17:13:31:100%:99:8.4556E-18:0:0:0:0:32 1/1:40:31:20:11:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:24:16:8:24:96%:99:2.0568E-13:32:1:1:0:25 1/1:41:25:18:7:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:41:20:21:39:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:13:8:5:12:100%:70:9.6148E-8:0:0:0:0:13 1/1:35:46:30:16:44:95.83%:99:1.9036E-25:35:2:2:0:48 1/1:40:24:12:12:26:92.31%:99:7.6222E-13:33:2:2:0:26 1/1:37:36:20:16:35:97.3%:99:2.1762E-20:39:1:1:0:37 1/1:38:20:11:9:19:100%:99:7.2544E-12:0:0:0:0:21 1/1:36:22:12:10:21:95.65%:99:2.9149E-12:38:1:1:0:24 1/1:44:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:44:22:9:13:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:40:21:19:41:95.24%:99:5.6346E-22:33:2:2:0:42 1/1:43:25:14:11:25:96.15%:99:5.4444E-14:33:1:1:0:26 0/1:38:27:15:12:29:87.1%:99:4.6134E-14:31:3:3:0:30 1/1:37:45:23:22:41:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:21:10:11:19:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:22:13:9:22:95.65%:99:4.7526E-13:0:0:0:0:22 1/1:47:17:13:4:16:100%:93:4.2852E-10:0:0:0:0:18 1/1:37:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:40:21:19:41:97.56%:99:9.8874E-23:37:1:1:0:43 0/1:37:44:23:21:48:88%:99:4.207E-23:37:4:1:3:49 1/1:42:32:17:15:34:94.12%:99:2.2142E-17:47:2:2:0:34 1/1:46:13:10:3:14:92.86%:64:3.7391E-7:33:1:0:1:14 1/1:40:28:18:10:30:93.33%:99:4.194E-15:44:2:2:0:30 1/1:45:22:10:12:23:91.67%:99:1.0078E-11:32:2:1:1:24 1/1:42:43:26:17:42:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:36:25:11:35:92.31%:99:1.1316E-19:33:2:1:1:38 1/1:40:47:25:22:48:94%:99:2.3219E-25:31:3:2:1:51 1/1:41:34:21:13:36:97.14%:99:3.2089E-19:34:1:0:1:36 1/1:39:45:23:22:44:97.83%:99:1.1441E-25:33:1:1:0:46 1/1:38:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:38:42:24:18:41:97.67%:99:6.6289E-24:34:1:1:0:43 1/1:44:18:8:10:18:90%:92:5.6585E-10:60:1:1:0:19 1/1:39:29:12:17:29:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:38:51:27:24:53:96.23%:99:2.3675E-28:39:2:0:2:53 1/1:36:31:18:13:30:93.94%:99:8.2416E-17:31:2:2:0:33 1/1:37:31:16:15:26:96.88%:99:1.8007E-17:46:1:0:1:32 1/1:39:26:13:13:26:96.3%:99:2.0165E-15:0:0:0:0:26 1/1:41:43:24:19:44:95.56%:99:1.0412E-23:46:2:1:1:45 1/1:38:37:20:17:36:97.37%:99:5.6582E-21:37:1:1:0:38 1/1:42:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:36:24:12:38:94.74%:99:1.1316E-19:30:2:1:1:39 1/1:47:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:30:17:13:30:96.77%:99:6.8754E-17:32:1:1:0:31 1/1:41:17:10:7:18:94.44%:86:2.0936E-9:32:1:0:1:19 0/1:36:35:21:14:38:87.5%:99:1.1364E-17:31:5:4:1:40 1/1:38:36:19:17:38:94.74%:99:1.1316E-19:32:2:2:0:39 1/1:42:29:17:12:30:96.67%:99:2.6212E-16:26:1:1:0:31 1/1:41:39:23:16:39:97.5%:99:3.8137E-22:32:1:0:1:41 1/1:43:32:16:16:30:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:45:25:20:44:97.83%:99:1.1441E-25:33:1:0:1:49 1/1:38:34:21:13:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:27:15:12:28:96.43%:99:3.7915E-15:26:1:1:0:29 1/1:41:32:15:17:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:23:15:38:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:42:62:38:24:63:93.94%:99:2.4296E-33:40:4:2:2:66 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:47:26:21:48:95.92%:99:5.0044E-26:35:2:1:1:49 1/1:42:23:13:10:23:95.83%:99:7.7525E-13:32:1:1:0:24 1/1:46:16:11:5:16:94.12%:87:1.6637E-9:0:0:0:0:16 1/1:37:35:18:17:35:97.22%:99:8.3613E-20:32:1:1:0:38 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:27:21:6:27:96.43%:99:3.7915E-15:30:1:1:0:28 1/1:39:33:24:9:31:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:27:16:11:26:96.43%:99:3.7915E-15:32:1:0:1:29 1/1:38:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:29:17:12:28:100%:99:3.3259E-17:0:0:0:0:29 0/1:39:23:15:8:26:88.46%:99:7.3681E-12:31:3:3:0:26 0/1:41:23:11:12:26:88.46%:99:2.7767E-12:33:2:1:1:26 1/1:37:35:22:13:36:94.59%:99:4.2437E-19:31:2:1:1:37 1/1:39:48:28:20:51:92.31%:99:2.3201E-25:35:4:4:0:52 1/1:38:26:17:9:26:96.3%:99:1.4382E-14:27:1:1:0:27 1/1:44:24:14:10:23:100%:99:3.101E-14:0:0:0:0:24 1/1:38:24:13:11:23:100%:99:3.101E-14:0:0:0:0:24 1/1:37:31:20:11:29:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:28:12:16:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:14:8:6:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:30:20:10:32:96.77%:99:6.8754E-17:33:1:1:0:32 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:35:18:17:34:92.11%:99:4.2437E-19:47:2:2:0:37 1/1:45:20:11:9:21:95.24%:99:4.0873E-11:32:1:1:0:21 1/1:37:47:23:24:46:97.92%:99:7.6145E-27:34:1:0:1:48 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:27:18:9:29:93.1%:99:1.5465E-14:37:2:1:1:29 1/1:39:19:9:10:20:95%:98:1.5234E-10:29:1:1:0:20 1/1:34:34:16:18:34:97.14%:99:3.2089E-19:31:1:1:0:35 1/1:36:20:11:9:21:95.24%:99:4.0873E-11:35:1:0:1:21 0/1:44:21:14:7:24:87.5%:99:9.0704E-11:33:3:1:2:24 1/1:39:38:23:15:37:97.44%:99:1.4697E-21:31:1:1:0:40 1/1:38:32:19:13:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:29:12:17:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:33:18:15:35:94.29%:99:5.9366E-18:29:2:1:1:35 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:39:27:12:39:97.5%:99:3.8137E-22:38:1:0:1:40 1/1:41:31:18:13:30:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:41:39:21:18:40:97.5%:99:3.8137E-22:34:1:1:0:40 1/1:39:32:16:16:33:94.12%:99:2.2142E-17:41:2:2:0:34 1/1:36:26:10:16:26:92.86%:99:1.4382E-14:34:1:0:1:27 1/1:34:21:8:13:18:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:27:13:14:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:35:28:15:13:29:93.33%:99:4.194E-15:32:2:0:2:31 1/1:38:40:17:23:42:93.02%:99:2.287E-21:35:3:2:1:45 1/1:32:28:11:17:24:96.55%:99:9.9776E-16:37:1:1:0:29 1/1:39:32:17:15:32:94.12%:99:2.2142E-17:31:2:1:1:35 1/1:34:25:15:10:23:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:23:16:7:21:95.83%:99:7.7525E-13:29:1:1:0:24 1/1:41:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:26:15:11:25:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:35:37:24:13:39:90.24%:99:3.5075E-19:32:4:1:3:41 1/1:37:25:11:14:25:96.15%:99:5.4444E-14:32:1:1:0:26 1/1:37:31:12:19:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:35:20:9:11:21:90.91%:98:1.3117E-10:31:2:2:0:22 1/1:39:26:14:12:26:92.86%:99:5.6872E-14:33:2:2:0:28 0/1:35:24:11:13:27:88.89%:99:2.0853E-12:31:3:2:1:27 1/1:37:17:10:7:16:94.44%:86:2.0936E-9:32:1:0:1:18 1/1:36:24:16:8:25:96%:99:2.0568E-13:33:1:0:1:25 1/1:37:19:10:9:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:34:44:22:22:41:100%:99:3.8097E-26:0:0:0:0:44 1/1:35:27:14:13:27:96.43%:99:3.7915E-15:36:1:1:0:29 1/1:42:19:9:10:21:90.48%:93:4.7003E-10:32:2:1:1:21 1/1:36:31:18:13:32:96.88%:99:1.8007E-17:26:1:1:0:32 1/1:36:45:23:22:43:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:36:18:18:37:97.3%:99:2.1762E-20:33:1:0:1:37 1/1:38:36:14:22:36:97.3%:99:2.1762E-20:33:1:1:0:37 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:18:10:8:20:90%:87:1.6758E-9:25:2:2:0:21 1/1:41:36:20:16:37:97.3%:99:2.1762E-20:26:1:1:0:37 0/1:35:29:15:14:31:85.29%:99:9.1482E-15:35:4:3:1:33 1/1:33:31:16:15:29:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:30:13:17:31:96.77%:99:6.8754E-17:34:1:0:1:31 1/1:39:40:26:14:39:97.56%:99:9.8874E-23:35:1:0:1:43 1/1:38:37:15:22:37:97.37%:99:5.6582E-21:35:1:0:1:39 1/1:35:37:20:17:34:100%:99:5.7269E-22:0:0:0:0:37 MTB_anc 4370537 . AC A . PASS AC=294;AF=0.980;AN=300;ANN=A|frameshift_variant|HIGH|eccD2_Rv3887c|gene3970|transcript|Transcript_gene3970|Coding|1/1|c.1147delG|p.Val383fs|1147/1530|1147/1530|383/509||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4370538delC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4370538delC||||||;LOF=(eccD2_Rv3887c|gene3970|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:41:48:25:23:48:97.96%:99:1.9625E-27:34:1:1:0:49 1/1:49:23:11:12:22:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:34:21:13:34:97.14%:99:3.2089E-19:32:1:0:1:35 1/1:45:31:16:15:31:96.88%:99:1.8007E-17:60:1:0:1:32 0/1:40:17:8:9:19:89.47%:82:5.9414E-9:34:2:2:0:19 1/1:40:18:12:6:20:90%:87:1.6758E-9:32:2:1:1:20 1/1:44:34:19:15:33:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:31:13:18:33:91.18%:99:2.7308E-16:41:3:2:1:34 0/1:44:25:10:15:29:86.21%:99:1.3609E-12:52:4:3:1:29 1/1:47:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:26:16:10:27:96.3%:99:1.4382E-14:35:1:1:0:27 1/1:45:35:16:19:35:97.22%:99:8.3613E-20:32:1:0:1:36 0/1:49:19:10:9:22:86.36%:89:1.0931E-9:34:3:1:2:22 1/1:45:42:23:19:45:93.33%:99:1.6658E-22:34:3:1:2:45 1/1:47:23:8:15:21:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:28:14:44:93.33%:99:1.6658E-22:42:3:1:2:45 1/1:43:20:15:5:22:90.91%:98:1.3117E-10:47:2:1:1:22 1/1:43:20:9:11:21:90.91%:98:1.3117E-10:33:2:1:1:22 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:18:11:7:17:94.74%:92:5.6585E-10:35:1:1:0:19 1/1:41:20:11:9:21:95.24%:99:4.0873E-11:32:1:0:1:22 1/1:44:43:26:17:45:95.56%:99:1.0412E-23:35:2:1:1:45 1/1:42:19:10:9:19:95%:98:1.5234E-10:32:1:1:0:20 1/1:40:28:16:12:29:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:39:42:24:18:44:95.45%:99:3.9431E-23:35:2:2:0:44 1/1:44:13:5:8:13:92.86%:64:3.7391E-7:60:1:1:0:14 1/1:40:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:50:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 0/1:41:33:15:18:37:89.19%:99:5.7997E-17:34:4:3:1:37 1/1:45:35:19:16:37:94.59%:99:4.2437E-19:35:2:2:0:37 1/1:44:29:18:11:27:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:13:12:27:92.59%:99:2.0853E-13:35:2:1:1:27 1/1:43:36:17:19:36:97.3%:99:2.1762E-20:60:1:1:0:37 1/1:46:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:33:19:14:33:97.06%:99:1.2301E-18:60:1:1:0:34 1/1:39:36:22:14:36:94.74%:99:1.1316E-19:60:2:2:0:38 1/1:41:39:26:13:41:95.12%:99:2.1258E-21:48:2:1:1:41 1/1:46:54:29:25:56:96.43%:99:4.2321E-30:33:2:0:2:56 1/1:45:37:18:19:36:97.37%:99:5.7269E-22:0:0:0:0:39 1/1:49:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:14:22:38:94.74%:99:1.1316E-19:33:2:0:2:38 1/1:36:21:9:12:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:30:20:10:33:90.91%:99:9.89E-16:35:3:1:2:33 1/1:45:39:24:15:40:97.5%:99:3.8137E-22:33:1:0:1:41 1/1:42:41:19:22:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:28:14:14:27:93.33%:99:4.194E-15:32:2:1:1:30 1/1:42:50:25:25:52:96.15%:99:9.0394E-28:30:2:1:1:53 1/1:46:38:22:16:39:95%:99:8.0088E-21:34:2:1:1:40 1/1:47:24:9:15:25:96%:99:2.0568E-13:37:1:1:0:25 1/1:43:47:24:23:47:97.92%:99:7.6145E-27:35:1:0:1:48 1/1:47:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:34:19:15:34:97.14%:99:3.2089E-19:33:1:0:1:35 1/1:41:28:14:14:28:96.55%:99:9.9776E-16:34:1:0:1:29 1/1:43:43:23:20:44:97.73%:99:1.7144E-24:37:1:1:0:44 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:28:14:14:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:48:19:29:48:100%:99:1.554E-28:0:0:0:0:48 1/1:41:27:11:16:25:96.43%:99:3.7915E-15:60:1:1:0:28 1/1:46:35:16:19:36:97.22%:99:8.3613E-20:60:1:1:0:36 1/1:43:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:41:21:20:42:95.35%:99:1.4915E-22:32:2:1:1:43 1/1:43:21:11:10:22:95.45%:99:1.0931E-11:33:1:0:1:22 1/1:44:36:21:15:35:97.3%:99:2.1762E-20:32:1:0:1:37 1/1:43:61:29:32:62:95.31%:99:2.0001E-33:32:3:1:2:64 1/1:41:28:14:14:30:93.33%:99:4.194E-15:33:2:1:1:31 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:17:9:8:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:36:16:20:37:97.3%:99:2.1762E-20:34:1:0:1:37 1/1:48:30:20:10:31:96.77%:99:6.8754E-17:30:1:0:1:31 1/1:44:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:49:33:20:13:34:97.06%:99:1.2301E-18:32:1:0:1:34 1/1:38:31:17:14:32:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:45:28:14:14:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:23:7:16:24:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:48:29:13:16:30:96.67%:99:2.6212E-16:33:1:0:1:30 1/1:41:26:11:15:24:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:27:11:16:28:93.1%:99:1.5465E-14:34:2:1:1:29 1/1:38:25:14:11:24:96.15%:99:5.4444E-14:24:1:1:0:26 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:32:18:14:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:30:21:9:31:96.77%:99:6.8754E-17:33:1:0:1:31 1/1:45:25:18:7:27:92.59%:99:2.0853E-13:46:2:1:1:27 1/1:40:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:30:18:12:29:100%:99:8.4556E-18:0:0:0:0:30 0/1:45:13:5:8:16:81.25%:57:1.6121E-6:34:3:0:3:16 1/1:45:38:19:19:39:95%:99:1.4697E-21:35:1:0:1:40 1/1:43:17:10:7:18:94.44%:86:2.0936E-9:29:1:1:0:18 1/1:50:23:14:9:24:95.83%:99:7.7525E-13:33:1:1:0:24 1/1:44:16:4:12:17:94.12%:81:7.7134E-9:60:1:0:1:17 1/1:40:51:22:29:48:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:26:14:12:25:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:40:24:16:40:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:42:25:16:9:24:96.15%:99:5.4444E-14:33:1:0:1:26 1/1:35:22:11:11:21:91.67%:99:1.0078E-11:45:2:2:0:24 1/1:43:24:10:14:25:96%:99:2.0568E-13:33:1:1:0:25 1/1:40:34:15:19:34:97.14%:99:3.2089E-19:33:1:1:0:35 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:15:15:28:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:17:9:8:16:94.44%:86:2.0936E-9:33:1:0:1:18 1/1:44:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:29:16:13:30:96.67%:99:2.6212E-16:35:1:0:1:30 1/1:41:34:16:18:36:94.44%:99:1.5887E-18:32:2:1:1:36 1/1:41:25:15:10:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:44:28:12:16:29:96.55%:99:9.9776E-16:33:1:0:1:29 1/1:40:35:28:7:36:97.22%:99:8.3613E-20:33:1:1:0:36 1/1:44:32:16:16:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:21:15:6:21:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:44:42:18:24:42:97.67%:99:6.6289E-24:34:1:1:0:43 1/1:46:23:14:9:25:92%:99:2.7767E-12:31:2:1:1:25 1/1:37:38:24:14:38:97.44%:99:1.4697E-21:37:1:1:0:39 1/1:39:30:12:18:31:96.77%:99:6.8754E-17:39:1:1:0:31 1/1:43:32:19:13:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:29:18:11:28:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:42:21:21:40:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:28:12:16:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:32:16:16:31:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:54:24:30:52:96.43%:99:4.2321E-30:33:2:2:0:56 1/1:37:19:5:14:18:95%:98:1.5234E-10:31:1:0:1:20 1/1:40:29:19:10:28:96.67%:99:2.6212E-16:32:1:1:0:31 1/1:36:34:20:14:33:94.44%:99:1.5887E-18:33:2:0:2:36 1/1:39:43:20:23:41:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:36:16:20:34:100%:99:2.2598E-21:0:0:0:0:36 1/1:37:28:14:14:26:100%:99:1.3074E-16:0:0:0:0:28 1/1:36:33:23:10:32:97.06%:99:1.2301E-18:33:1:0:1:34 1/1:40:28:13:15:27:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:31:14:17:27:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:40:21:19:39:100%:99:9.3017E-24:0:0:0:0:40 1/1:36:55:29:26:55:94.83%:99:5.8604E-30:42:3:2:1:58 1/1:42:41:19:22:40:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:40:17:23:41:97.56%:99:9.8874E-23:34:1:0:1:41 1/1:39:47:24:23:44:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:37:20:17:38:94.87%:99:3.0128E-20:34:2:2:0:39 1/1:42:45:23:22:45:97.83%:99:1.1441E-25:32:1:0:1:46 1/1:39:42:23:19:43:97.67%:99:6.6289E-24:35:1:0:1:43 0/1:39:16:8:8:18:88.89%:76:2.0936E-8:33:2:1:1:18 1/1:43:27:17:10:29:93.1%:99:1.5465E-14:33:2:1:1:29 1/1:43:51:29:22:51:98.08%:99:3.3479E-29:60:1:0:1:52 1/1:42:53:31:22:54:96.36%:99:1.6199E-29:33:2:0:2:55 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 4372097 . T C . PASS AC=2;AF=6.667e-03;AN=300;ANN=C|missense_variant|MODERATE|Rv3888c_Rv3888c|gene3971|transcript|Transcript_gene3971|Coding|1/1|c.610A>G|p.Thr204Ala|610/1026|610/1026|204/341||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4372097T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4372097T>C||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:47:0%:89:1E0:44:47:23:24:48 0/0:0:0:0:0:15:0%:29:1E0:47:15:7:8:15 0/0:0:0:0:0:52:0%:96:1E0:44:52:25:27:52 0/0:0:0:0:0:39:0%:74:1E0:47:39:20:19:39 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:33 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:38:0%:70:1E0:53:38:18:20:39 0/0:0:0:0:0:23:0%:44:1E0:45:23:16:7:23 0/0:0:0:0:0:32:0%:59:1E0:49:32:20:12:33 0/0:0:0:0:0:24:0%:44:1E0:49:24:12:12:24 0/0:0:0:0:0:39:0%:74:1E0:44:39:21:18:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:24:14:38 0/0:0:0:0:0:26:0%:47:1E0:49:26:13:13:27 0/0:0:0:0:0:40:0%:74:1E0:45:40:17:23:42 0/0:0:0:0:0:28:0%:51:1E0:46:28:14:14:28 0/0:0:0:0:0:40:0%:74:1E0:47:40:24:16:40 0/0:0:0:0:0:28:0%:51:1E0:45:28:12:16:28 0/0:0:0:0:0:22:0%:40:1E0:44:22:12:10:23 0/0:0:0:0:0:30:0%:55:1E0:48:30:10:20:30 0/0:0:0:0:0:35:0%:67:1E0:47:35:18:17:35 0/0:0:0:0:0:21:0%:40:1E0:49:21:13:8:23 0/0:0:0:0:0:48:0%:89:1E0:46:48:31:17:48 0/0:35:1:0:1:27:3.7%:41:5E-1:41:26:12:14:27 0/0:0:0:0:0:26:0%:47:1E0:44:26:13:13:27 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:23 0/0:0:0:0:0:24:0%:44:1E0:49:24:14:10:24 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:27 0/0:0:0:0:0:29:0%:55:1E0:48:29:16:13:29 0/0:0:0:0:0:30:0%:55:1E0:48:30:10:20:31 0/0:0:0:0:0:37:0%:70:1E0:44:37:21:16:37 0/0:0:0:0:0:27:0%:52:1E0:48:27:17:10:28 0/0:0:0:0:0:21:0%:40:1E0:43:21:13:8:22 0/0:0:0:0:0:27:0%:52:1E0:50:27:17:10:27 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:17:17:34 0/0:0:0:0:0:35:0%:67:1E0:46:35:15:20:36 0/0:0:0:0:0:63:0%:99:1E0:46:63:34:29:65 0/0:0:0:0:0:39:0%:74:1E0:43:39:18:21:39 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:25:0%:48:1E0:45:25:13:12:25 0/0:0:0:0:0:43:0%:82:1E0:45:43:23:20:43 0/0:0:0:0:0:24:0%:44:1E0:48:24:15:9:24 0/0:0:0:0:0:34:0%:62:1E0:43:34:16:18:34 0/0:0:0:0:0:31:0%:59:1E0:46:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:45:26:17:9:26 0/0:0:0:0:0:14:0%:25:1E0:42:14:8:6:15 0/0:0:0:0:0:31:0%:59:1E0:45:31:15:16:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:16:25:43 0/0:0:0:0:0:37:0%:70:1E0:45:37:15:22:38 0/0:0:0:0:0:20:0%:36:1E0:47:20:13:7:20 0/0:0:0:0:0:39:0%:74:1E0:42:39:19:20:39 0/0:0:0:0:0:16:0%:29:1E0:47:16:11:5:16 0/0:0:0:0:0:27:0%:52:1E0:46:27:14:13:28 0/0:0:0:0:0:34:0%:62:1E0:45:34:19:15:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:17:20:38 0/0:0:0:0:0:26:0%:47:1E0:41:26:13:13:28 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:48:0%:89:1E0:43:48:18:30:49 0/0:0:0:0:0:46:0%:85:1E0:46:46:25:21:46 0/0:0:0:0:0:32:0%:59:1E0:48:32:18:14:33 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:36 0/0:0:0:0:0:43:0%:82:1E0:45:43:21:22:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:14:14:28 0/0:0:0:0:0:51:0%:97:1E0:46:51:24:27:51 0/0:0:0:0:0:52:0%:96:1E0:41:52:23:29:52 0/0:0:0:0:0:41:0%:78:1E0:46:41:22:19:41 0/0:0:0:0:0:39:0%:74:1E0:48:39:21:18:39 0/0:0:0:0:0:17:0%:33:1E0:49:17:11:6:17 0/0:0:0:0:0:20:0%:36:1E0:45:20:12:8:20 0/0:0:0:0:0:35:0%:67:1E0:46:35:23:12:36 0/0:0:0:0:0:37:0%:70:1E0:49:37:16:21:37 0/0:0:0:0:0:17:0%:33:1E0:47:17:9:8:19 0/0:0:0:0:0:38:0%:70:1E0:50:38:16:22:38 0/0:0:0:0:0:41:0%:78:1E0:41:41:20:21:41 0/0:0:0:0:0:31:0%:59:1E0:48:31:21:10:32 0/0:0:0:0:0:25:0%:48:1E0:43:25:10:15:27 0/0:0:0:0:0:27:0%:52:1E0:50:27:17:10:27 0/0:0:0:0:0:28:0%:51:1E0:42:28:18:10:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:15:12:27 0/0:0:0:0:0:44:0%:81:1E0:45:44:16:28:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:19:19:38 0/0:0:0:0:0:31:0%:59:1E0:42:31:16:15:33 0/0:0:0:0:0:27:0%:52:1E0:48:27:16:11:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:18:16:35 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:30:0%:55:1E0:48:30:17:13:31 0/0:0:0:0:0:23:0%:44:1E0:49:23:14:9:25 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:24:0%:44:1E0:50:24:11:13:24 0/0:0:0:0:0:31:0%:59:1E0:48:31:17:14:32 0/0:0:0:0:0:25:0%:48:1E0:50:25:16:9:26 0/0:0:0:0:0:39:0%:74:1E0:42:39:22:17:39 0/0:0:0:0:0:35:0%:67:1E0:44:35:22:13:35 0/0:0:0:0:0:54:0%:99:1E0:43:54:25:29:55 0/0:0:0:0:0:16:0%:29:1E0:47:16:7:9:17 0/0:0:0:0:0:38:0%:70:1E0:44:38:21:17:38 0/0:0:0:0:0:38:0%:70:1E0:43:38:20:18:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:16:20:38 0/0:0:0:0:0:36:0%:66:1E0:41:36:22:14:36 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:34:0%:62:1E0:45:34:22:12:34 0/0:0:0:0:0:37:0%:70:1E0:43:37:20:17:38 0/0:0:0:0:0:44:0%:81:1E0:43:44:21:23:46 0/0:0:0:0:0:27:0%:52:1E0:45:27:11:16:28 0/0:0:0:0:0:42:0%:77:1E0:46:42:21:21:42 0/0:0:0:0:0:23:0%:44:1E0:48:23:7:16:23 0/0:0:0:0:0:33:0%:63:1E0:46:33:19:14:34 0/0:0:0:0:0:26:0%:47:1E0:44:26:12:14:27 0/0:0:0:0:0:32:0%:59:1E0:44:32:21:11:32 0/0:0:0:0:0:36:0%:66:1E0:43:36:13:23:36 0/0:0:0:0:0:32:0%:59:1E0:44:32:10:22:32 0/0:0:0:0:0:26:0%:47:1E0:40:26:12:14:27 0/0:0:0:0:0:24:0%:44:1E0:45:24:18:6:24 0/0:0:0:0:0:29:0%:55:1E0:41:29:16:13:29 0/0:0:0:0:0:59:0%:99:1E0:39:59:32:27:62 0/0:0:0:0:0:34:0%:62:1E0:40:34:15:19:36 0/0:0:0:0:0:44:0%:81:1E0:45:44:24:20:46 0/0:0:0:0:0:36:0%:66:1E0:39:36:16:20:37 0/0:0:0:0:0:58:0%:99:1E0:40:58:37:21:61 0/0:0:0:0:0:54:0%:99:1E0:43:54:31:23:54 0/0:0:0:0:0:31:0%:59:1E0:45:31:16:15:31 0/0:0:0:0:0:26:0%:47:1E0:43:26:12:14:27 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:50 0/0:0:0:0:0:32:0%:59:1E0:40:32:18:14:33 0/0:0:0:0:0:51:0%:97:1E0:42:51:30:21:52 0/0:0:0:0:0:29:0%:55:1E0:42:29:16:13:29 0/0:0:0:0:0:42:0%:77:1E0:39:42:18:24:43 0/0:0:0:0:0:46:0%:85:1E0:41:46:21:25:46 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:48 0/0:0:0:0:0:48:0%:89:1E0:39:48:25:23:49 0/0:0:0:0:0:65:0%:99:1E0:40:65:38:27:66 0/0:0:0:0:0:37:0%:70:1E0:42:37:18:19:37 0/0:0:0:0:0:44:0%:81:1E0:42:44:26:18:46 0/0:0:0:0:0:35:0%:67:1E0:39:35:20:15:37 0/0:0:0:0:0:40:0%:74:1E0:42:40:18:22:40 0/0:0:0:0:0:66:0%:99:1E0:38:66:41:25:66 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:42 0/0:0:0:0:0:36:0%:66:1E0:40:36:22:14:36 0/0:0:0:0:0:43:0%:82:1E0:42:43:19:24:43 0/0:0:0:0:0:45:0%:85:1E0:42:45:20:25:46 0/0:0:0:0:0:31:0%:59:1E0:44:31:20:11:31 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:48:0%:89:1E0:42:48:23:25:48 0/0:0:0:0:0:52:0%:96:1E0:41:52:25:27:52 0/0:0:0:0:0:27:0%:52:1E0:43:27:14:13:28 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:17:20:38 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:43 0/0:0:0:0:0:40:0%:74:1E0:39:40:22:18:41 MTB_anc 4372353 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|Rv3888c_Rv3888c|gene3971|transcript|Transcript_gene3971|Coding|1/1|c.354G>C|p.Arg118Arg|354/1026|354/1026|118/341||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4372353C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4372353C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:55:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:55:23:32:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:45:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:44:25:12:13:27:92.59%:99:2.0853E-13:48:2:1:1:30 1/1:47:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:46:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:47:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:61:32:29:61:100%:99:2.609E-36:0:0:0:0:61 1/1:45:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:9:16:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:34:15:19:35:97.14%:99:3.2089E-19:60:1:0:1:36 1/1:42:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:55:24:31:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:8:2:6:8:100%:41:7.77E-5:0:0:0:0:8 1/1:46:19:4:15:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:51:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:48:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:50:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:49:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:40:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:43:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:35:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:45:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:33 1/1:43:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:36:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:38:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:41:60:27:33:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:40:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:39:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:45:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:45:21:24:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:44:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 MTB_anc 4372650 . G GC . PASS AC=4;AF=0.013;AN=300;ANN=GC|frameshift_variant|HIGH|Rv3888c_Rv3888c|gene3971|transcript|Transcript_gene3971|Coding|1/1|c.56dupG|p.Asp20fs|56/1026|56/1026|19/341||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4372650_4372651insC||||||,GC|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4372650_4372651insC||||||;HET=0;LOF=(Rv3888c_Rv3888c|gene3971|1|1.00);NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:44:0%:81:1E0:45:44:28:16:44 0/0:0:0:0:0:21:0%:40:1E0:51:21:10:11:21 0/0:0:0:0:0:58:0%:99:1E0:45:58:32:26:58 0/0:0:0:0:0:32:0%:59:1E0:44:32:16:16:32 0/0:60:1:1:0:33:3.03%:52:5E-1:44:32:14:18:33 0/0:0:0:0:0:23:0%:44:1E0:48:23:12:11:26 0/0:0:0:0:0:38:0%:70:1E0:49:38:18:20:38 0/0:0:0:0:0:20:0%:36:1E0:45:20:10:10:21 0/0:0:0:0:0:41:0%:78:1E0:48:41:17:24:41 0/0:0:0:0:0:33:0%:63:1E0:47:33:16:17:33 0/0:0:0:0:0:40:0%:74:1E0:47:40:20:20:41 0/0:0:0:0:0:43:0%:82:1E0:43:43:19:24:43 0/0:0:0:0:0:22:0%:40:1E0:47:22:12:10:22 0/0:0:0:0:0:44:0%:81:1E0:41:44:27:17:44 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:35:0%:67:1E0:43:35:17:18:36 0/0:0:0:0:0:21:0%:40:1E0:43:21:12:9:21 0/0:0:0:0:0:22:0%:40:1E0:46:22:13:9:24 0/0:0:0:0:0:31:0%:59:1E0:48:31:18:13:31 0/0:0:0:0:0:26:0%:47:1E0:44:26:17:9:26 0/0:0:0:0:0:34:0%:62:1E0:43:34:24:10:34 0/0:0:0:0:0:48:0%:89:1E0:44:48:26:22:48 0/0:0:0:0:0:32:0%:59:1E0:48:32:17:15:32 0/0:38:1:0:1:38:2.63%:58:5E-1:42:37:20:17:39 0/0:0:0:0:0:38:0%:70:1E0:43:38:18:20:38 0/0:0:0:0:0:26:0%:47:1E0:47:26:15:11:26 0/0:0:0:0:0:26:0%:47:1E0:44:26:10:16:26 0/0:0:0:0:0:25:0%:48:1E0:45:25:9:16:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:9:10:19 0/0:0:0:0:0:28:0%:51:1E0:46:28:13:15:28 0/0:0:0:0:0:39:0%:74:1E0:46:39:24:15:39 0/0:0:0:0:0:28:0%:51:1E0:40:28:15:13:29 0/0:0:0:0:0:43:0%:82:1E0:51:43:24:19:43 0/0:0:0:0:0:31:0%:59:1E0:47:31:17:14:31 0/0:0:0:0:0:42:0%:77:1E0:43:42:19:23:42 0/0:0:0:0:0:33:0%:63:1E0:46:33:18:15:34 0/0:0:0:0:0:41:0%:78:1E0:44:41:22:19:41 0/0:0:0:0:0:55:0%:99:1E0:46:55:24:31:55 0/0:0:0:0:0:43:0%:82:1E0:46:43:18:25:43 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:60:1:0:1:33:3.03%:52:5E-1:44:32:18:14:33 0/0:0:0:0:0:36:0%:66:1E0:46:36:21:15:36 0/0:0:0:0:0:28:0%:51:1E0:47:28:11:17:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:47:0%:89:1E0:42:47:23:24:48 0/0:0:0:0:0:20:0%:36:1E0:44:20:12:8:20 0/0:0:0:0:0:24:0%:44:1E0:46:24:10:14:24 0/0:0:0:0:0:28:0%:51:1E0:42:28:11:17:29 0/0:0:0:0:0:33:0%:63:1E0:44:33:16:17:33 0/0:39:1:1:0:49:2.04%:80:5E-1:45:48:20:28:50 0/0:0:0:0:0:13:0%:25:1E0:49:13:9:4:13 0/0:0:0:0:0:34:0%:62:1E0:42:34:17:17:34 0/0:0:0:0:0:28:0%:51:1E0:47:28:14:14:28 0/0:0:0:0:0:31:0%:59:1E0:45:31:20:11:31 0/0:0:0:0:0:20:0%:36:1E0:44:20:10:10:20 0/0:0:0:0:0:33:0%:63:1E0:44:33:19:14:33 0/0:0:0:0:0:32:0%:59:1E0:43:32:18:14:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:16:18:34 0/0:0:0:0:0:39:0%:74:1E0:49:39:21:18:41 0/0:0:0:0:0:32:0%:59:1E0:48:32:11:21:33 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:27 0/0:0:0:0:0:40:0%:74:1E0:45:40:18:22:42 0/0:0:0:0:0:29:0%:55:1E0:51:29:20:9:29 0/0:0:0:0:0:32:0%:59:1E0:43:32:14:18:32 0/0:0:0:0:0:60:0%:99:1E0:45:60:27:33:61 0/0:0:0:0:0:30:0%:55:1E0:42:30:17:13:30 0/0:0:0:0:0:39:0%:74:1E0:45:39:16:23:39 0/0:0:0:0:0:21:0%:40:1E0:49:21:10:11:21 0/0:0:0:0:0:34:0%:62:1E0:48:34:14:20:34 0/0:0:0:0:0:38:0%:70:1E0:49:38:20:18:38 0/0:0:0:0:0:32:0%:59:1E0:49:32:14:18:33 0/0:0:0:0:0:20:0%:36:1E0:48:20:13:7:20 0/0:0:0:0:0:28:0%:51:1E0:52:28:13:15:28 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:27:0%:52:1E0:43:27:13:14:27 0/0:0:0:0:0:28:0%:51:1E0:46:28:15:13:28 0/0:0:0:0:0:44:0%:81:1E0:47:44:26:18:44 0/0:0:0:0:0:29:0%:55:1E0:43:29:17:12:29 0/0:0:0:0:0:32:0%:59:1E0:44:32:15:17:32 0/0:0:0:0:0:26:0%:47:1E0:41:26:16:10:27 0/0:0:0:0:0:38:0%:70:1E0:44:38:24:14:39 0/0:60:1:1:0:35:2.86%:55:5E-1:42:34:19:15:35 0/0:0:0:0:0:36:0%:66:1E0:49:36:19:17:36 0/0:38:1:0:1:29:3.45%:45:5E-1:43:28:15:13:29 0/0:0:0:0:0:37:0%:70:1E0:42:37:19:18:37 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:32:0%:59:1E0:47:32:20:12:32 0/0:0:0:0:0:37:0%:70:1E0:45:37:20:17:37 0/0:0:0:0:0:29:0%:55:1E0:46:29:13:16:29 0/0:0:0:0:0:26:0%:47:1E0:45:26:10:16:26 0/0:0:0:0:0:23:0%:44:1E0:44:23:13:10:23 0/0:0:0:0:0:46:0%:85:1E0:43:46:21:25:46 0/0:0:0:0:0:29:0%:55:1E0:43:29:22:7:29 0/0:0:0:0:0:42:0%:77:1E0:43:42:25:17:42 0/0:0:0:0:0:31:0%:59:1E0:43:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:46:27:15:12:27 0/0:0:0:0:0:33:0%:63:1E0:44:33:15:18:33 0/0:0:0:0:0:50:0%:92:1E0:39:50:26:24:51 0/0:35:1:0:1:35:2.86%:55:5E-1:41:34:19:15:37 0/0:0:0:0:0:39:0%:74:1E0:50:39:17:22:39 0/0:0:0:0:0:32:0%:59:1E0:42:32:16:16:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:13:15:28 0/0:0:0:0:0:23:0%:44:1E0:42:23:12:11:24 0/0:0:0:0:0:31:0%:59:1E0:46:31:18:13:33 0/0:0:0:0:0:28:0%:51:1E0:48:28:15:13:28 0/0:0:0:0:0:26:0%:47:1E0:46:26:17:9:26 0/0:0:0:0:0:38:0%:70:1E0:44:38:23:15:38 0/0:0:0:0:0:32:0%:59:1E0:50:32:15:17:32 0/0:0:0:0:0:35:0%:67:1E0:42:35:23:12:36 0/0:0:0:0:0:33:0%:63:1E0:42:33:19:14:33 0/0:0:0:0:0:38:0%:70:1E0:44:38:12:26:38 0/0:0:0:0:0:30:0%:55:1E0:41:30:14:16:33 0/0:0:0:0:0:42:0%:77:1E0:44:42:23:19:42 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:39 0/0:0:0:0:0:47:0%:89:1E0:44:47:27:20:48 0/0:0:0:0:0:31:0%:59:1E0:40:31:20:11:31 0/0:0:0:0:0:45:0%:85:1E0:44:45:25:20:48 1/1:40:30:19:11:29:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:59:35:24:61:96.72%:99:6.3137E-34:34:1:0:1:61 0/0:0:0:0:0:39:0%:74:1E0:42:39:24:15:39 0/0:0:0:0:0:34:0%:62:1E0:46:34:13:21:34 0/0:0:0:0:0:39:0%:74:1E0:46:39:23:16:40 0/0:0:0:0:0:59:0%:99:1E0:40:59:33:26:61 0/0:0:0:0:0:33:0%:63:1E0:41:33:19:14:33 0/0:0:0:0:0:59:0%:99:1E0:46:59:29:30:60 0/0:0:0:0:0:38:0%:70:1E0:40:38:27:11:43 0/0:39:1:1:0:40:2.5%:62:5E-1:44:39:16:23:41 0/0:0:0:0:0:41:0%:78:1E0:40:41:20:21:42 0/0:0:0:0:0:44:0%:81:1E0:41:44:24:20:46 0/0:0:0:0:0:41:0%:78:1E0:41:41:22:19:43 0/0:0:0:0:0:50:0%:92:1E0:41:50:28:22:50 0/0:0:0:0:0:41:0%:78:1E0:42:41:25:16:43 0/0:0:0:0:0:46:0%:85:1E0:41:46:26:20:47 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:46 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:37 0/0:0:0:0:0:68:0%:99:1E0:38:68:33:35:69 0/0:0:0:0:0:42:0%:77:1E0:47:42:18:24:43 0/0:0:0:0:0:24:0%:44:1E0:44:24:15:9:25 0/0:0:0:0:0:43:0%:82:1E0:42:43:23:20:43 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:41 0/0:0:0:0:0:25:0%:48:1E0:42:25:12:13:26 0/0:0:0:0:0:37:0%:70:1E0:42:37:21:16:37 0/0:60:1:1:0:41:2.44%:66:5E-1:43:40:23:17:41 0/0:0:0:0:0:42:0%:77:1E0:42:42:26:16:45 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:35:0%:67:1E0:40:35:23:12:36 0/0:0:0:0:0:46:0%:85:1E0:42:46:25:21:47 0/0:0:0:0:0:62:0%:99:1E0:40:62:34:28:63 0/0:0:0:0:0:44:0%:81:1E0:41:44:23:21:44 MTB_anc 4374228 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|esxD_Rv3891c|gene3974|transcript|Transcript_gene3974|Coding|1/1|c.145G>A|p.Ala49Thr|145/324|145/324|49/107||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4374228C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4374228C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:52:12:7:5:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:50:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:46:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:49:34:16:18:35:97.14%:99:3.2089E-19:60:1:1:0:35 1/1:45:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:64:36:28:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:49:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:46:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:51:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:45:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:47:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:36:18:18:37:97.3%:99:2.1762E-20:36:1:0:1:38 1/1:42:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:50:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:46:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:51:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:56:25:31:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:42:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:41:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:43:48:19:29:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:64:29:35:64:100%:99:4.1752E-38:0:0:0:0:65 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:77:36:41:77:100%:99:6.8219E-46:0:0:0:0:78 1/1:42:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:40:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:49:29:20:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:49 1/1:42:49:28:21:49:100%:99:3.925E-29:0:0:0:0:51 1/1:41:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:40:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:49:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:56:32:24:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:63:35:28:63:100%:99:1.657E-37:0:0:0:0:63 1/1:37:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 MTB_anc 4374630 . C A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PPE69_Rv3892c|gene3975|transcript|Transcript_gene3975|Coding|1/1|c.1054G>T|p.Ala352Ser|1054/1200|1054/1200|352/399||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4374630C>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.4374630C>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:59:20:39:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:49:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:9:23:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:47:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:24:14:10:25:96%:99:2.0568E-13:38:1:1:0:27 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:45:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:42:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:54:33:21:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:42:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:47:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:42:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:61 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:46:27:19:47:97.87%:99:2.4343E-27:0:0:0:0:48 1/1:40:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:52:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:24:12:12:24:100%:99:3.101E-14:0:0:0:0:28 1/1:40:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:43:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:38:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:39:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:42:49:24:25:49:100%:99:3.925E-29:0:0:0:0:50 1/1:43:24:14:10:24:100%:99:3.101E-14:0:0:0:0:27 1/1:40:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:44:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:36:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:20 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:23 1/1:39:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:38 1/1:42:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:48:32:16:48:100%:99:1.554E-28:0:0:0:0:49 1/1:40:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:51 1/1:39:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 MTB_anc 4374806 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|PPE69_Rv3892c|gene3975|transcript|Transcript_gene3975|Coding|1/1|c.878C>T|p.Ala293Val|878/1200|878/1200|293/399||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4374806G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.4374806G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:23:13:10:24:95.83%:99:1.2146E-13:0:0:0:0:25 1/1:40:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:53:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:24:17:7:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:37:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:43:15:10:5:16:93.75%:75:2.8282E-8:60:1:1:0:17 1/1:42:24:16:8:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:43:30:13:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:46:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:35:18:17:36:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:40:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:30:22:8:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:29:24:5:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:42:30:12:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:38:29:20:9:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:41:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:38:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:38:51:35:16:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:43:22:21:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:40:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:39:45:31:14:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:48:26:22:48:100%:99:1.554E-28:0:0:0:0:50 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:51:31:20:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:39:28:20:8:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:35:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:41:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:37:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:50:34:16:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:40:28:12:41:97.56%:99:9.8874E-23:38:1:1:0:44 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:37:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:42:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:39:47:30:17:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:40:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:37:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:35:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:39:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:38:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:41:38:23:15:39:97.44%:99:1.4697E-21:37:1:1:0:41 1/1:40:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:38:25:13:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:39:39:24:15:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:24 1/1:39:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:37:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:39:39:29:10:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:37:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:33:27:6:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:36:27:9:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:39:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 MTB_anc 4375625 . GCCTTGAGCAGCAGGTCGTTGGCCTCAGGTGTCCGCGCAGCCCATCCTGGATCGGGCATGCCTACTTACCCTTGCAGCGCCGAT G . PASS AC=110;AF=0.404;AN=272;ANN=G|frameshift_variant&start_lost|HIGH|PPE69_Rv3892c|gene3975|transcript|Transcript_gene3975|Coding|1/1|c.-25_58delATCGGCGCTGCAAGGGTAAGTAGGCATGCCCGATCCAGGATGGGCTGCGCGGACACCTGAGGCCAACGACCTGCTGCTCAAGG|p.Met1fs|58/1200|1/1200|1/399||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4375626_4375708delCCTTGAGCAGCAGGTCGTTGGCCTCAGGTGTCCGCGCAGCCCATCCTGGATCGGGCATGCCTACTTACCCTTGCAGCGCCGAT||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|PE/PPE|||n.4375626_4375708delCCTTGAGCAGCAGGTCGTTGGCCTCAGGTGTCCGCGCAGCCCATCCTGGATCGGGCATGCCTACTTACCCTTGCAGCGCCGAT||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|RBS|||n.4375626_4375708delCCTTGAGCAGCAGGTCGTTGGCCTCAGGTGTCCGCGCAGCCCATCCTGGATCGGGCATGCCTACTTACCCTTGCAGCGCCGAT||||||,G|intergenic_region|MODIFIER|PPE69_Rv3892c-PE36_Rv3893c|gene3975-gene3976|intergenic_region|gene3975-gene3976|||n.4375626_4375708delCCTTGAGCAGCAGGTCGTTGGCCTCAGGTGTCCGCGCAGCCCATCCTGGATCGGGCATGCCTACTTACCCTTGCAGCGCCGAT||||||;LOF=(PPE69_Rv3892c|gene3975|1|1.00);set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:46:15:10:5:24:62.5%:59:1.196E-6:39:9:4:5:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:51:12:9:3:21:57.14%:45:2.658E-5:35:9:5:4:22 0/1:38:7:3:4:12:58.33%:26:2.2883E-3:36:5:4:1:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:5 0/1:48:6:0:6:16:37.5%:20:8.837E-3:40:10:2:8:16 0/1:43:7:3:4:10:70%:28:1.548E-3:37:3:1:2:10 0/0:39:4:3:1:12:33.33%:4:4.6584E-2:45:8:4:4:12 0/1:54:9:7:2:13:69.23%:36:2.2883E-4:42:4:4:0:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:44:14:9:5:30:46.67%:50:8.3837E-6:42:16:9:7:30 0/0:60:4:3:1:10:40%:3:4.3344E-2:41:6:4:2:10 0/1:50:17:6:11:28:58.62%:65:2.627E-7:42:12:10:2:30 0/0:50:5:2:3:11:45.45%:3:1.7544E-2:37:6:1:5:11 0/0:35:5:3:2:11:45.45%:3:1.7544E-2:37:6:2:4:12 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/0:48:4:1:3:10:40%:3:4.3344E-2:41:6:4:2:10 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:49:9:5:4:12:75%:37:1.6826E-4:45:3:3:0:12 0/0:48:2:1:1:8:25%:5:2.3333E-1:40:6:4:2:10 0/1:43:9:4:5:15:60%:34:3.4983E-4:41:6:3:3:15 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:44:11:8:3:18:61.11%:42:5.2969E-5:40:7:4:3:18 0/1:43:14:7:7:18:73.68%:59:1.2025E-6:36:5:2:3:19 0/0:40:3:1:2:13:23.08%:9:1.1E-1:37:10:4:6:13 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/1:49:7:3:4:15:46.67%:25:3.1609E-3:43:8:3:5:15 0/1:47:12:7:5:21:57.14%:45:2.658E-5:40:9:3:6:21 0/1:49:10:3:7:17:58.82%:38:1.4831E-4:40:7:3:4:17 0/0:41:5:1:4:13:38.46%:4:1.9565E-2:39:8:3:5:13 0/1:46:13:8:5:25:52%:48:1.4654E-5:39:12:12:0:25 0/1:56:9:4:5:14:64.29%:35:2.8986E-4:44:5:3:2:14 0/1:39:6:3:3:11:50%:21:6.865E-3:44:6:2:4:12 0/1:46:7:2:5:13:53.85%:25:2.6087E-3:38:6:1:5:14 0/1:46:19:13:6:30:63.33%:75:2.6715E-8:41:11:8:3:30 0/1:49:10:5:5:23:43.48%:35:2.8066E-4:40:13:8:5:23 0/1:46:12:8:4:26:46.15%:43:4.6796E-5:40:14:7:7:27 0/1:51:14:8:6:21:66.67%:56:2.1998E-6:39:7:4:3:21 0/1:46:15:9:6:26:57.69%:57:1.7241E-6:39:11:5:6:26 0/1:52:12:7:5:22:54.55%:45:3.066E-5:42:10:5:5:23 0/1:47:8:6:2:15:53.33%:29:1.0995E-3:39:7:2:5:15 0/0:46:5:4:1:13:38.46%:4:1.9565E-2:36:8:6:2:15 0/1:41:13:5:8:20:65%:51:6.4422E-6:36:7:2:5:21 0/0:42:6:2:4:22:27.27%:9:1.057E-2:39:16:9:7:23 0/1:43:18:9:9:31:58.06%:69:1.1154E-7:42:13:6:7:32 0/0:53:5:2:3:15:33.33%:6:2.1073E-2:46:10:7:3:17 0/1:48:8:7:1:20:40%:27:1.638E-3:35:12:4:8:20 0/1:37:8:5:3:17:47.06%:28:1.3389E-3:41:9:4:5:17 0/1:48:6:2:4:18:33.33%:20:9.5308E-3:38:12:7:5:18 0/1:46:11:6:5:18:61.11%:42:5.2969E-5:47:7:2:5:18 0/1:51:14:10:4:23:60.87%:54:3.4067E-6:41:9:4:5:23 0/1:47:7:3:4:15:46.67%:25:3.1609E-3:39:8:5:3:15 0/1:48:9:7:2:18:50%:32:5.1645E-4:39:9:8:1:18 0/0:40:5:3:2:18:27.78%:8:2.2727E-2:40:13:6:7:18 0/1:51:10:5:5:21:47.62%:36:2.3971E-4:43:11:8:3:23 0/1:46:7:5:2:16:43.75%:24:3.3988E-3:38:9:2:7:16 0/1:40:10:4:6:16:58.82%:38:1.4831E-4:45:7:2:5:18 0/1:45:14:9:5:21:66.67%:56:2.1998E-6:43:7:4:3:21 0/1:46:9:4:5:13:69.23%:36:2.2883E-4:41:4:1:3:13 0/1:38:6:2:4:13:46.15%:21:7.4534E-3:37:7:5:2:13 0/1:42:12:9:3:23:52.17%:44:3.4748E-5:37:11:2:9:23 0/1:44:12:9:3:19:63.16%:47:1.8611E-5:39:7:5:2:19 0/1:45:13:7:6:19:68.42%:53:5.0106E-6:39:6:4:2:19 0/1:53:10:7:3:17:58.82%:38:1.4831E-4:36:7:6:1:17 0/1:48:13:5:8:24:54.17%:48:1.2938E-5:37:11:5:6:25 0/1:43:12:7:5:14:80%:52:5.2605E-6:44:3:2:1:15 0/1:49:18:5:13:29:62.07%:71:7.6888E-8:41:11:6:5:29 0/1:49:10:5:5:22:45.45%:35:2.6061E-4:40:12:5:7:22 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 0/1:56:7:4:3:14:50%:25:2.8986E-3:47:7:3:4:14 0/1:51:7:4:3:13:53.85%:25:2.6087E-3:41:6:2:4:13 0/0:48:4:2:2:10:40%:3:4.3344E-2:44:6:3:3:10 0/1:44:15:9:6:26:57.69%:57:1.7241E-6:43:11:7:4:26 0/1:49:13:8:5:26:50%:47:1.6379E-5:38:13:7:6:26 0/1:48:7:6:1:13:53.85%:25:2.6087E-3:45:6:3:3:13 0/1:41:10:8:2:18:52.63%:37:1.7215E-4:40:8:3:5:19 0/1:49:7:2:5:11:58.33%:26:2.2883E-3:45:5:2:3:13 0/1:43:7:1:6:13:53.85%:25:2.6087E-3:41:6:6:0:13 0/1:44:8:4:4:20:40%:27:1.638E-3:38:12:10:2:20 0/1:47:14:6:8:28:50%:51:6.911E-6:38:14:5:9:28 0/1:47:10:2:8:22:45.45%:35:2.6061E-4:40:12:10:2:22 0/0:55:5:2:3:19:26.32%:10:2.3166E-2:39:14:6:8:19 0/1:41:8:4:4:13:57.14%:30:9.6618E-4:41:6:2:4:14 0/1:40:6:4:2:12:50%:21:6.865E-3:39:6:2:4:12 0/1:47:18:6:12:24:75%:77:1.8413E-8:41:6:1:5:24 0/1:47:17:11:6:24:70.83%:70:8.1543E-8:37:7:2:5:24 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:50:14:7:7:22:63.64%:55:2.7817E-6:35:8:4:4:22 0/1:46:13:4:9:18:72.22%:54:3.7078E-6:38:5:3:2:18 0/1:54:13:3:10:19:68.42%:53:5.0106E-6:40:6:2:4:20 0/1:48:8:3:5:12:66.67%:31:6.7304E-4:36:4:2:2:12 0/1:45:9:5:4:28:32.14%:30:9.1169E-4:37:19:8:11:29 0/1:48:10:5:5:20:50%:36:2.1796E-4:38:10:4:6:20 0/1:49:16:11:5:25:64%:63:4.1493E-7:34:9:5:4:26 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:34:5:4:1:11:41.67%:3:1.8634E-2:36:7:2:5:14 0/1:49:9:4:5:15:60%:34:3.4983E-4:41:6:2:4:15 0/0:41:4:3:1:19:21.05%:13:5.251E-2:38:15:7:8:19 0/1:45:8:5:3:14:57.14%:30:9.6618E-4:37:6:2:4:14 0/1:50:8:3:5:18:44.44%:28:1.4461E-3:36:10:4:6:18 0/1:46:14:10:4:24:58.33%:53:4.0663E-6:38:10:5:5:24 0/1:49:8:6:2:22:36.36%:27:1.8042E-3:39:14:6:8:22 0/1:40:7:4:3:12:58.33%:26:2.2883E-3:42:5:4:1:15 0/0:44:3:0:3:9:33.33%:4:1.0294E-1:36:6:2:4:9 0/1:47:13:4:9:23:56.52%:49:1.1242E-5:39:10:5:5:24 0/0:54:4:0:4:12:33.33%:4:4.6584E-2:39:8:6:2:12 0/1:53:17:10:7:23:73.91%:72:5.7694E-8:39:6:5:1:23 0/1:42:13:10:3:23:59.09%:50:9.5813E-6:40:9:5:4:24 0/1:44:12:2:10:22:54.55%:45:3.066E-5:44:10:8:2:22 0/1:51:10:3:7:22:45.45%:35:2.6061E-4:38:12:8:4:22 0/1:39:8:5:3:15:53.33%:29:1.0995E-3:37:7:4:3:15 0/0:37:3:1:2:9:33.33%:4:1.0294E-1:37:6:1:5:10 0/1:53:7:6:1:24:29.17%:23:4.7006E-3:40:17:9:8:25 1/1:38:9:4:5:9:90%:42:5.9538E-5:60:1:1:0:10 0/1:38:12:3:9:17:66.67%:48:1.4831E-5:36:6:1:5:19 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:44:6:1:5:15:40%:20:8.4291E-3:37:9:6:3:15 0/1:50:7:5:2:11:63.64%:27:1.935E-3:36:4:2:2:12 0/1:42:14:7:7:26:53.85%:52:5.4595E-6:39:12:6:6:26 0/1:49:19:10:9:29:65.52%:76:2.1144E-8:38:10:4:6:30 0/1:42:8:4:4:13:61.54%:30:8.238E-4:37:5:4:1:13 0/0:44:4:2:2:10:40%:3:4.3344E-2:36:6:4:2:10 0/1:46:8:4:4:20:40%:27:1.638E-3:35:12:7:5:20 ./.:.:.:.:.:.:.:.:.:.:.:.:.:9 0/0:40:6:2:4:21:28.57%:9:1.0344E-2:38:15:9:6:22 0/0:37:3:1:2:10:30%:4:1.0526E-1:35:7:3:4:10 0/1:42:8:0:8:22:36.36%:27:1.8042E-3:35:14:5:9:24 0/1:45:6:5:1:16:37.5%:20:8.837E-3:37:10:4:6:16 0/1:45:9:4:5:19:47.37%:32:5.667E-4:37:10:2:8:21 0/0:36:3:2:1:12:25%:6:1.087E-1:35:9:4:5:12 0/1:45:10:3:7:16:62.5%:39:1.2413E-4:36:6:2:4:16 0/1:37:8:5:3:14:57.14%:30:9.6618E-4:36:6:3:3:15 0/1:47:10:6:4:18:55.56%:37:1.7215E-4:41:8:3:5:18 0/0:55:5:4:1:19:26.32%:10:2.3166E-2:36:14:6:8:20 0/1:49:7:5:2:16:46.67%:25:3.1609E-3:39:8:4:4:17 0/0:36:5:1:4:19:26.32%:10:2.3166E-2:38:14:4:10:21 ./.:.:.:.:.:.:.:.:.:.:.:.:.:7 0/1:45:6:1:5:16:37.5%:20:8.837E-3:37:10:3:7:16 0/1:43:10:6:4:19:52.63%:37:1.9541E-4:36:9:3:6:19 0/1:48:8:3:5:14:57.14%:30:9.6618E-4:39:6:1:5:15 0/0:36:2:1:1:9:22.22%:7:2.3529E-1:37:7:4:3:11 0/1:50:12:7:5:19:60%:46:2.2548E-5:36:8:4:4:20 0/1:49:9:3:6:14:64.29%:35:2.8986E-4:41:5:4:1:14 0/1:45:7:4:3:18:36.84%:23:3.9926E-3:39:12:5:7:20 0/0:42:4:1:3:13:30.77%:6:4.7826E-2:39:9:2:7:13 0/1:45:8:1:7:18:44.44%:28:1.4461E-3:45:10:3:7:19 0/1:55:7:4:3:17:41.18%:24:3.6151E-3:35:10:5:5:17 0/1:45:8:4:4:23:34.78%:27:1.8791E-3:38:15:10:5:23 0/1:41:10:8:2:20:47.62%:36:2.3971E-4:34:11:6:5:21 MTB_anc 4377033 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|synonymous_variant|LOW|eccC2_Rv3894c|gene3977|transcript|Transcript_gene3977|Coding|1/1|c.3420G>C|p.Ser1140Ser|3420/4191|3420/4191|1140/1396||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4377033C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4377033C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:54:21:33:55:98.18%:99:5.6837E-31:37:1:1:0:55 1/1:51:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:44:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:47:29:11:18:30:96.67%:99:3.3259E-17:0:0:0:0:30 1/1:42:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:46:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:49:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:57:34:23:57:100%:99:6.4572E-34:0:0:0:0:57 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:24:15:9:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:46:18:28:47:97.87%:99:2.4343E-27:0:0:0:0:48 1/1:49:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:47:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:37:18:19:38:97.37%:99:5.7269E-22:0:0:0:0:38 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:44:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:43:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:47:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:44:21:23:45:97.78%:99:3.8097E-26:0:0:0:0:46 1/1:42:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:45:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:45:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:47:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:61:33:28:61:100%:99:2.609E-36:0:0:0:0:61 1/1:42:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:49:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:52:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:49:24:25:49:100%:99:3.925E-29:0:0:0:0:49 1/1:41:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:47:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:51:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:52:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:32:16:16:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:39:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:46:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:45:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:46:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:47:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:38:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:67:34:33:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:41:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:44:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:54:32:22:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:40:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:38:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:45:20:25:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:58:35:23:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:42:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:40:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:39:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 MTB_anc 4379125 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|stop_gained|HIGH|eccC2_Rv3894c|gene3977|transcript|Transcript_gene3977|Coding|1/1|c.1328C>G|p.Ser443*|1328/4191|1328/4191|443/1396||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4379125G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4379125G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:52:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:45:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:40:18:22:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:46:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:48:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:48:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:12:4:8:12:100%:64:3.698E-7:0:0:0:0:12 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:49:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:49:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:30:9:21:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:43:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:51:14:2:12:15:100%:76:2.4927E-8:0:0:0:0:15 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:52:32:20:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:12:5:7:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:53:21:32:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:50:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:45:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:30:15:15:31:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:49:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:9:4:5:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:48:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:19:11:8:20:95%:98:1.5234E-10:60:1:0:1:21 1/1:43:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:38:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:24:11:13:24:100%:99:3.101E-14:0:0:0:0:26 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:37:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:37:24:13:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:42:26:16:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 MTB_anc 4382538 . C T . PASS AC=4;AF=0.013;AN=300;ANN=T|missense_variant|MODERATE|Rv3896c_Rv3896c|gene3979|transcript|Transcript_gene3979|Coding|1/1|c.314G>A|p.Arg105His|314/909|314/909|105/302||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4382538C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4382538C>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:53:0%:99:1E0:43:53:29:24:55 0/0:0:0:0:0:32:0%:59:1E0:44:32:14:18:32 0/0:0:0:0:0:51:0%:97:1E0:42:51:25:26:51 0/0:0:0:0:0:20:0%:36:1E0:37:20:10:10:22 0/0:0:0:0:0:25:0%:48:1E0:42:25:9:16:25 0/0:0:0:0:0:28:0%:51:1E0:43:28:9:19:28 0/0:0:0:0:0:21:0%:40:1E0:50:21:14:7:21 0/0:0:0:0:0:26:0%:47:1E0:40:26:11:15:26 0/0:0:0:0:0:31:0%:59:1E0:44:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:46:26:12:14:26 0/0:0:0:0:0:32:0%:59:1E0:47:32:15:17:33 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:38 0/0:0:0:0:0:16:0%:29:1E0:48:16:7:9:16 0/0:0:0:0:0:51:0%:97:1E0:43:51:15:36:52 0/0:0:0:0:0:23:0%:44:1E0:43:23:10:13:23 0/0:0:0:0:0:30:0%:55:1E0:47:30:16:14:30 0/0:0:0:0:0:18:0%:32:1E0:45:18:8:10:20 0/0:0:0:0:0:27:0%:52:1E0:42:27:12:15:28 0/0:0:0:0:0:17:0%:33:1E0:43:17:8:9:18 0/0:0:0:0:0:32:0%:59:1E0:46:32:19:13:32 0/0:0:0:0:0:36:0%:66:1E0:38:36:12:24:37 0/0:0:0:0:0:39:0%:74:1E0:44:39:17:22:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:14:11:26 0/0:0:0:0:0:38:0%:70:1E0:45:38:14:24:38 0/0:0:0:0:0:51:0%:97:1E0:39:51:23:28:52 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:20 0/0:0:0:0:0:29:0%:55:1E0:43:29:14:15:29 0/0:0:0:0:0:16:0%:29:1E0:42:16:10:6:16 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:30 0/0:0:0:0:0:42:0%:77:1E0:46:42:22:20:43 0/0:0:0:0:0:40:0%:74:1E0:42:40:15:25:41 0/0:0:0:0:0:43:0%:82:1E0:41:43:16:27:43 0/0:0:0:0:0:25:0%:48:1E0:50:25:12:13:27 0/0:0:0:0:0:40:0%:74:1E0:40:40:23:17:41 0/0:0:0:0:0:35:0%:67:1E0:49:35:17:18:37 0/0:0:0:0:0:38:0%:70:1E0:41:38:20:18:38 0/0:0:0:0:0:31:0%:59:1E0:43:31:17:14:33 0/0:39:1:1:0:50:2%:80:5E-1:44:49:21:28:52 0/0:37:1:1:0:41:2.44%:66:5E-1:45:40:18:22:41 0/0:0:0:0:0:52:0%:96:1E0:42:52:25:27:53 0/0:0:0:0:0:42:0%:77:1E0:43:42:22:20:46 0/0:0:0:0:0:34:0%:62:1E0:43:34:22:12:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:10:20:30 0/0:0:0:0:0:31:0%:59:1E0:41:31:16:15:31 0/0:33:1:1:0:41:2.44%:66:5E-1:44:40:18:22:41 0/0:0:0:0:0:37:0%:70:1E0:41:37:17:20:40 0/0:0:0:0:0:35:0%:67:1E0:47:35:16:19:38 0/0:0:0:0:0:55:0%:99:1E0:41:55:25:30:57 0/0:0:0:0:0:52:0%:96:1E0:42:52:27:25:52 0/0:0:0:0:0:36:0%:66:1E0:44:36:20:16:36 0/0:0:0:0:0:28:0%:51:1E0:43:28:11:17:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:18:22:41 0/0:0:0:0:0:17:0%:33:1E0:44:17:11:6:17 0/0:0:0:0:0:38:0%:70:1E0:40:38:13:25:39 0/0:0:0:0:0:35:0%:67:1E0:42:35:10:25:37 0/0:0:0:0:0:54:0%:99:1E0:42:54:22:32:55 0/0:0:0:0:0:31:0%:59:1E0:42:31:21:10:33 0/0:0:0:0:0:35:0%:67:1E0:45:35:12:23:35 0/0:0:0:0:0:52:0%:96:1E0:43:52:30:22:54 0/0:0:0:0:0:36:0%:66:1E0:47:36:17:19:37 0/0:0:0:0:0:23:0%:44:1E0:49:23:7:16:24 0/0:0:0:0:0:48:0%:89:1E0:40:48:23:25:49 0/0:0:0:0:0:44:0%:81:1E0:41:44:19:25:44 1/1:43:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:48:0%:89:1E0:45:48:19:29:48 0/0:0:0:0:0:44:0%:81:1E0:42:44:16:28:44 0/0:0:0:0:0:61:0%:99:1E0:43:61:31:30:61 0/0:0:0:0:0:19:0%:37:1E0:47:19:9:10:19 0/0:0:0:0:0:22:0%:40:1E0:42:22:9:13:22 0/0:0:0:0:0:27:0%:52:1E0:48:27:11:16:28 0/0:0:0:0:0:23:0%:44:1E0:51:23:12:11:23 0/0:0:0:0:0:19:0%:37:1E0:44:19:5:14:19 0/0:0:0:0:0:39:0%:74:1E0:47:39:15:24:39 0/0:0:0:0:0:55:0%:99:1E0:43:55:25:30:56 0/0:0:0:0:0:22:0%:40:1E0:41:22:9:13:22 0/0:0:0:0:0:39:0%:74:1E0:45:39:18:21:39 0/0:0:0:0:0:35:0%:67:1E0:47:35:17:18:35 0/0:0:0:0:0:41:0%:78:1E0:44:41:19:22:41 0/0:34:1:0:1:27:3.7%:41:5E-1:44:26:12:14:28 0/0:0:0:0:0:38:0%:70:1E0:41:38:15:23:40 0/0:0:0:0:0:46:0%:85:1E0:42:46:17:29:49 0/0:0:0:0:0:24:0%:44:1E0:44:24:11:13:26 0/0:0:0:0:0:24:0%:44:1E0:49:24:10:14:24 0/0:0:0:0:0:35:0%:67:1E0:39:35:12:23:35 0/0:0:0:0:0:30:0%:55:1E0:40:30:12:18:30 0/0:0:0:0:0:44:0%:81:1E0:43:44:17:27:46 0/0:0:0:0:0:17:0%:33:1E0:47:17:10:7:19 0/0:0:0:0:0:29:0%:55:1E0:42:29:11:18:29 0/0:0:0:0:0:36:0%:66:1E0:44:36:19:17:36 0/0:0:0:0:0:28:0%:51:1E0:45:28:9:19:28 0/0:0:0:0:0:21:0%:40:1E0:46:21:14:7:21 0/0:0:0:0:0:51:0%:97:1E0:40:51:30:21:51 0/0:0:0:0:0:34:0%:62:1E0:44:34:19:15:34 0/0:0:0:0:0:45:0%:85:1E0:43:45:25:20:46 0/0:0:0:0:0:29:0%:55:1E0:44:29:13:16:29 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:32 0/0:0:0:0:0:18:0%:32:1E0:42:18:9:9:18 0/0:0:0:0:0:38:0%:70:1E0:41:38:17:21:38 0/0:0:0:0:0:48:0%:89:1E0:42:48:20:28:48 0/0:0:0:0:0:31:0%:59:1E0:40:31:18:13:31 0/0:0:0:0:0:44:0%:81:1E0:42:44:19:25:45 0/0:38:1:1:0:34:2.94%:51:5E-1:41:33:12:21:34 0/0:0:0:0:0:39:0%:74:1E0:38:39:17:22:39 0/0:0:0:0:0:20:0%:36:1E0:48:20:8:12:21 0/0:0:0:0:0:42:0%:77:1E0:43:42:18:24:42 0/0:0:0:0:0:23:0%:44:1E0:46:23:9:14:23 0/0:0:0:0:0:44:0%:81:1E0:42:44:24:20:44 0/0:0:0:0:0:38:0%:70:1E0:42:38:22:16:39 0/0:37:1:1:0:28:3.57%:41:5E-1:43:27:11:16:28 0/0:0:0:0:0:32:0%:59:1E0:44:32:17:15:32 0/0:0:0:0:0:29:0%:55:1E0:43:29:13:16:29 0/0:0:0:0:0:21:0%:40:1E0:40:21:6:15:21 0/0:0:0:0:0:35:0%:67:1E0:45:35:17:18:35 0/0:0:0:0:0:38:0%:70:1E0:41:38:18:20:40 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:42 0/0:0:0:0:0:44:0%:81:1E0:40:44:18:26:46 0/0:38:1:0:1:43:2.33%:70:5E-1:41:42:20:22:44 0/0:0:0:0:0:17:0%:33:1E0:37:17:9:8:17 0/0:0:0:0:0:58:0%:99:1E0:42:58:27:31:58 0/0:0:0:0:0:65:0%:99:1E0:42:65:30:35:65 0/0:0:0:0:0:27:0%:52:1E0:44:27:13:14:28 0/0:0:0:0:0:12:0%:21:1E0:43:12:4:8:12 0/0:0:0:0:0:43:0%:82:1E0:40:43:15:28:43 0/0:0:0:0:0:42:0%:77:1E0:40:42:21:21:42 0/0:0:0:0:0:53:0%:99:1E0:40:53:28:25:54 0/0:0:0:0:0:27:0%:52:1E0:39:27:14:13:28 0/0:0:0:0:0:36:0%:66:1E0:40:36:18:18:39 0/0:0:0:0:0:30:0%:55:1E0:40:30:13:17:30 0/0:0:0:0:0:33:0%:63:1E0:43:33:13:20:33 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:32 0/0:0:0:0:0:31:0%:59:1E0:41:31:13:18:32 0/0:0:0:0:0:21:0%:40:1E0:36:21:10:11:21 0/0:0:0:0:0:43:0%:82:1E0:39:43:22:21:43 0/0:0:0:0:0:26:0%:47:1E0:40:26:13:13:26 0/0:0:0:0:0:29:0%:55:1E0:39:29:14:15:29 0/0:0:0:0:0:58:0%:99:1E0:38:58:25:33:61 0/0:0:0:0:0:54:0%:99:1E0:45:54:29:25:58 0/0:0:0:0:0:43:0%:82:1E0:42:43:17:26:43 0/0:0:0:0:0:47:0%:89:1E0:41:47:15:32:47 0/0:0:0:0:0:36:0%:66:1E0:43:36:18:18:37 0/0:0:0:0:0:19:0%:37:1E0:41:19:13:6:19 0/0:0:0:0:0:31:0%:59:1E0:44:31:12:19:31 0/0:0:0:0:0:25:0%:48:1E0:41:25:8:17:26 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:17:0%:33:1E0:40:17:9:8:18 0/0:0:0:0:0:30:0%:55:1E0:45:30:9:21:30 0/0:0:0:0:0:44:0%:81:1E0:45:44:16:28:44 0/0:38:1:1:0:59:1.69%:98:5E-1:40:58:33:25:59 0/0:0:0:0:0:45:0%:85:1E0:41:45:27:18:48 MTB_anc 4383144 . C CCGGGG . PASS AC=275;AF=0.917;AN=300;ANN=CCGGGG|frameshift_variant|HIGH|Rv3897c_Rv3897c|gene3980|transcript|Transcript_gene3980|Coding|1/1|c.496_497insCCCCG|p.Gly166fs|496/633|496/633|166/210||,CCGGGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4383144_4383145insCGGGG||||||,CCGGGG|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4383144_4383145insCGGGG||||||;LOF=(Rv3897c_Rv3897c|gene3980|1|1.00);NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/1:42:41:22:19:46:87.23%:99:2.0407E-21:41:4:3:1:47 1/1:49:20:15:5:21:95.24%:99:7.2544E-12:0:0:0:0:21 1/1:46:56:36:20:57:98.25%:99:2.5602E-33:0:0:0:0:57 1/1:47:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:18:13:5:20:90%:92:5.6585E-10:36:1:1:0:20 1/1:43:14:9:5:14:93.33%:69:1.0315E-7:60:1:1:0:16 0/1:49:28:15:13:34:82.35%:99:6.9527E-14:45:5:4:1:34 1/1:43:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 0/1:45:25:13:12:27:89.29%:99:2.0853E-13:60:2:1:1:28 1/1:49:27:14:13:30:90%:99:1.5465E-14:46:2:1:1:30 1/1:45:25:12:13:27:92.59%:99:2.0853E-13:47:2:1:1:27 0/1:44:43:26:17:52:82.69%:99:1.0955E-20:33:9:7:2:52 1/1:47:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:42:21:21:46:91.3%:99:5.6062E-22:34:4:3:1:46 1/1:43:14:8:6:15:93.33%:69:1.0315E-7:60:1:1:0:15 1/1:43:35:22:13:33:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:23:13:10:25:92%:99:1.2146E-13:0:0:0:0:25 1/1:43:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:42:13:8:5:15:86.67%:64:3.7391E-7:60:1:0:1:15 1/1:45:24:8:16:23:100%:99:3.101E-14:0:0:0:0:24 1/1:45:22:14:8:23:95.65%:99:2.9149E-12:36:1:1:0:23 1/1:43:47:28:19:50:94%:99:2.3219E-25:35:3:3:0:50 1/1:48:21:10:11:22:91.3%:99:1.8578E-12:0:0:0:0:22 0/1:42:42:28:14:47:89.36%:99:1.5987E-21:39:5:3:2:47 0/1:38:27:14:13:32:81.82%:99:2.3785E-13:39:5:3:2:33 1/1:44:22:15:7:24:91.67%:99:2.9149E-12:32:1:0:1:24 1/1:35:21:8:13:21:91.3%:99:3.6437E-11:34:2:1:1:23 1/1:45:30:17:13:30:96.77%:99:6.8754E-17:37:1:1:0:31 1/1:46:27:19:8:30:90%:99:4.6134E-14:36:3:3:0:30 1/1:40:33:18:15:34:94.29%:99:1.2301E-18:33:1:0:1:35 1/1:41:37:17:20:39:94.87%:99:3.0128E-20:35:2:0:2:39 1/1:43:22:12:10:24:91.67%:99:2.9149E-12:32:1:1:0:24 1/1:49:23:16:7:25:92%:99:7.7525E-13:37:1:1:0:25 1/1:41:28:17:11:27:93.33%:99:9.9776E-16:34:1:0:1:30 1/1:45:25:16:9:27:92.59%:99:2.0853E-13:49:2:2:0:27 1/1:45:42:30:12:43:95.45%:99:6.6289E-24:34:1:0:1:44 0/1:41:30:17:13:34:88.24%:99:9.89E-16:34:3:0:3:34 1/1:45:42:28:14:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:46:43:23:20:45:95.56%:99:1.0412E-23:46:2:0:2:45 1/1:43:34:17:17:37:91.89%:99:3.5146E-20:0:0:0:0:37 1/1:44:29:20:9:31:93.55%:99:1.1344E-15:35:2:1:1:31 1/1:47:33:17:16:35:94.29%:99:1.2301E-18:33:1:0:1:35 0/1:42:14:6:8:16:87.5%:69:1.0315E-7:35:1:1:0:16 1/1:47:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 0/1:43:24:12:12:28:85.71%:99:7.6222E-13:48:2:2:0:28 0/1:44:29:20:9:33:87.88%:99:1.1344E-15:47:2:0:2:33 1/1:41:30:14:16:32:93.75%:99:3.0612E-16:34:2:1:1:32 1/1:41:31:16:15:33:91.18%:99:8.2416E-17:34:2:1:1:34 1/1:45:31:14:17:32:96.88%:99:1.8007E-17:34:1:0:1:32 1/1:46:29:12:17:29:96.67%:99:2.6212E-16:32:1:1:0:30 1/1:45:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:41:41:24:17:43:93.18%:99:1.4915E-22:47:2:1:1:44 0/1:45:16:9:7:17:88.89%:76:2.0936E-8:45:2:1:1:18 1/1:43:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:21:16:5:23:91.3%:99:3.6437E-11:35:2:1:1:23 1/1:42:34:16:18:36:94.44%:99:3.2089E-19:33:1:0:1:36 0/1:42:32:18:14:36:86.49%:99:7.5196E-17:32:3:1:2:37 1/1:43:19:9:10:21:90.48%:93:4.7003E-10:38:2:1:1:21 1/1:42:32:18:14:35:91.43%:99:7.5196E-17:35:3:2:1:35 0/1:44:31:14:17:34:88.57%:99:1.8007E-17:35:1:0:1:34 1/1:46:26:16:10:27:96.3%:99:1.4382E-14:33:1:0:1:27 0/1:42:25:13:12:28:89.29%:99:2.0853E-13:47:2:0:2:28 0/1:42:34:21:13:37:89.47%:99:5.6582E-18:33:3:3:0:38 1/1:46:26:15:11:27:92.86%:99:5.6872E-14:49:2:1:1:28 1/1:48:29:15:14:31:93.55%:99:1.1344E-15:45:2:0:2:31 1/1:41:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:28:20:8:30:90.32%:99:9.9776E-16:34:1:1:0:31 1/1:44:46:31:15:45:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:15:6:9:16:93.75%:75:2.8282E-8:33:1:1:0:16 1/1:52:19:12:7:21:90.48%:93:4.7003E-10:48:2:2:0:21 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:19:14:5:20:90.48%:98:1.5234E-10:33:1:1:0:20 1/1:41:16:9:7:16:94.12%:81:7.7134E-9:51:1:0:1:17 1/1:49:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:32:21:11:33:96.97%:99:4.7095E-18:36:1:1:0:33 1/1:45:28:16:12:28:96.55%:99:9.9776E-16:34:1:1:0:29 1/1:41:31:22:9:33:93.94%:99:8.2416E-17:47:2:1:1:33 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:26:14:12:27:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:45:21:14:7:22:91.3%:99:1.0931E-11:37:1:1:0:23 1/1:45:35:16:19:36:97.22%:99:8.3613E-20:34:1:1:0:37 1/1:43:39:20:19:41:95.12%:99:3.8137E-22:33:1:0:1:41 1/1:45:24:13:11:26:92.31%:99:2.0568E-13:38:1:1:0:26 1/1:42:39:26:13:40:95.12%:99:3.6742E-23:0:0:0:0:41 1/1:39:32:20:12:32:96.97%:99:4.7095E-18:36:1:1:0:34 1/1:41:28:15:13:28:93.33%:99:4.194E-15:49:2:1:1:31 1/1:46:22:11:11:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:13:15:29:93.33%:99:4.194E-15:41:2:1:1:30 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:30:15:15:31:96.77%:99:6.8754E-17:33:1:0:1:31 0/1:49:24:15:9:27:88.89%:99:7.6222E-13:47:2:1:1:27 1/1:40:46:25:21:50:92%:99:8.6743E-25:34:3:2:1:50 1/1:42:25:16:9:26:92.59%:99:2.0853E-13:36:2:1:1:27 1/1:43:50:31:19:52:96.15%:99:1.3013E-28:35:1:0:1:52 1/1:44:26:17:9:27:96.3%:99:1.4382E-14:34:1:0:1:27 1/1:42:27:14:13:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:15:14:29:96.67%:99:2.6212E-16:31:1:0:1:30 1/1:43:27:14:13:29:93.1%:99:3.7915E-15:60:1:1:0:29 0/1:46:24:10:14:27:88.89%:99:2.0853E-12:33:3:2:1:27 1/1:44:34:21:13:37:91.89%:99:5.6582E-18:35:3:2:1:37 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:32:17:15:33:96.97%:99:5.4567E-19:0:0:0:0:33 1/1:42:24:14:10:24:96%:99:2.0568E-13:34:1:0:1:25 0/1:41:27:14:13:29:87.1%:99:4.6134E-14:34:3:2:1:31 1/1:45:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:29:12:17:31:90.62%:99:1.1344E-15:36:2:2:0:32 1/1:40:40:24:16:41:97.56%:99:9.8874E-23:33:1:0:1:41 1/1:44:29:15:14:30:93.55%:99:2.6212E-16:37:1:1:0:31 0/1:44:32:20:12:36:88.89%:99:2.2142E-17:47:2:1:1:36 1/1:45:19:10:9:21:90.48%:93:4.7003E-10:34:2:1:1:22 1/1:41:25:11:14:26:96.15%:99:7.9107E-15:0:0:0:0:26 1/1:42:41:20:21:39:97.62%:99:2.5612E-23:60:1:1:0:42 1/1:38:33:19:14:32:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:42:18:24:41:95.45%:99:3.9431E-23:36:2:0:2:45 1/1:37:32:18:14:32:96.97%:99:4.7095E-18:34:1:0:1:33 1/1:44:20:11:9:22:90.91%:98:1.3117E-10:47:2:1:1:22 1/1:37:22:17:5:23:95.65%:99:2.9149E-12:36:1:1:0:23 1/1:40:35:21:14:35:94.59%:99:4.2437E-19:34:2:0:2:37 1/1:42:39:19:20:39:95.12%:99:3.8137E-22:32:1:0:1:40 1/1:45:18:12:6:19:94.74%:92:5.6585E-10:34:1:0:1:20 1/1:46:18:10:8:19:94.74%:99:1.1019E-10:0:0:0:0:19 1/1:39:41:28:13:43:93.18%:99:1.4915E-22:33:2:1:1:44 1/1:43:34:18:16:37:91.89%:99:5.6582E-18:33:3:2:1:37 0/1:42:25:14:11:26:89.29%:99:2.0853E-13:32:2:0:2:29 1/1:40:39:17:22:41:95.12%:99:3.8137E-22:35:1:0:1:42 1/1:39:35:20:15:34:100%:99:8.9137E-21:0:0:0:0:35 0/1:38:28:20:8:33:84.85%:99:1.2857E-14:35:3:1:2:34 1/1:39:29:13:16:28:96.67%:99:3.3259E-17:0:0:0:0:31 1/1:39:32:16:16:34:94.12%:99:4.7095E-18:33:1:0:1:34 0/1:37:33:15:18:36:89.19%:99:2.0653E-17:30:3:1:2:37 0/1:40:30:13:17:32:88.24%:99:3.0612E-16:46:2:1:1:35 1/1:37:36:21:15:37:94.74%:99:2.2598E-21:0:0:0:0:38 1/1:41:25:11:14:25:92.59%:99:5.4444E-14:33:1:0:1:27 1/1:41:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 0/1:38:41:23:18:47:85.42%:99:2.0407E-21:35:4:2:2:49 1/1:39:28:11:17:28:96.55%:99:1.3074E-16:0:0:0:0:29 1/1:39:43:22:21:44:95.56%:99:1.0412E-23:35:2:1:1:45 1/1:37:30:21:9:30:96.77%:99:6.8754E-17:48:1:0:1:31 1/1:40:28:17:11:30:93.33%:99:4.194E-15:32:2:2:0:30 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:22:9:13:24:91.67%:99:2.9149E-12:33:1:1:0:24 1/1:43:41:22:19:45:91.11%:99:2.0407E-21:34:4:3:1:45 1/1:41:34:18:16:35:97.14%:99:3.2089E-19:37:1:1:0:35 1/1:50:14:7:7:15:93.33%:76:2.4927E-8:0:0:0:0:15 1/1:41:28:13:15:29:96.55%:99:9.9776E-16:38:1:1:0:29 1/1:44:41:22:19:43:95.35%:99:2.3541E-24:0:0:0:0:43 1/1:40:51:25:26:52:98.08%:99:2.5024E-30:0:0:0:0:52 1/1:37:30:20:10:30:90.91%:99:9.89E-16:34:3:2:1:33 MTB_anc 4383280 . G T . PASS AC=2;AF=6.667e-03;AN=300;ANN=T|missense_variant|MODERATE|Rv3897c_Rv3897c|gene3980|transcript|Transcript_gene3980|Coding|1/1|c.361C>A|p.Pro121Thr|361/633|361/633|121/210||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4383280G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4383280G>T||||||;HET=0;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:46:0%:85:1E0:37:46:20:26:46 0/0:0:0:0:0:12:0%:21:1E0:45:12:8:4:12 0/0:0:0:0:0:53:0%:99:1E0:39:53:27:26:53 0/0:0:0:0:0:14:0%:25:1E0:37:14:8:6:14 0/0:0:0:0:0:20:0%:36:1E0:40:20:10:10:20 0/0:0:0:0:0:14:0%:25:1E0:40:14:10:4:14 0/0:0:0:0:0:20:0%:36:1E0:45:20:11:9:20 0/0:0:0:0:0:15:0%:29:1E0:39:15:6:9:16 0/0:0:0:0:0:23:0%:44:1E0:43:23:9:14:23 0/0:0:0:0:0:24:0%:44:1E0:46:24:14:10:24 0/0:0:0:0:0:19:0%:37:1E0:41:19:8:11:19 0/0:0:0:0:0:41:0%:78:1E0:39:41:21:20:41 0/0:0:0:0:0:9:0%:18:1E0:39:9:4:5:9 0/0:0:0:0:0:41:0%:78:1E0:40:41:22:19:45 0/0:0:0:0:0:15:0%:29:1E0:41:15:9:6:15 0/0:0:0:0:0:27:0%:52:1E0:38:27:13:14:28 0/0:0:0:0:0:24:0%:44:1E0:39:24:14:10:24 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:21 0/0:0:0:0:0:11:0%:22:1E0:42:11:8:3:11 0/0:0:0:0:0:27:0%:52:1E0:37:27:6:21:27 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:20 0/0:0:0:0:0:43:0%:82:1E0:38:43:15:28:44 0/0:0:0:0:0:19:0%:37:1E0:43:19:5:14:19 0/0:0:0:0:0:32:0%:59:1E0:41:32:13:19:32 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:26 0/0:0:0:0:0:20:0%:36:1E0:39:20:12:8:21 0/0:0:0:0:0:25:0%:48:1E0:39:25:10:15:26 0/0:0:0:0:0:19:0%:37:1E0:45:19:10:9:19 0/0:0:0:0:0:22:0%:40:1E0:41:22:14:8:22 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:30 0/0:0:0:0:0:33:0%:63:1E0:40:33:16:17:35 0/0:0:0:0:0:26:0%:47:1E0:37:26:12:14:27 0/0:0:0:0:0:24:0%:44:1E0:42:24:13:11:24 0/0:0:0:0:0:23:0%:44:1E0:38:23:9:14:24 0/0:0:0:0:0:22:0%:40:1E0:44:22:8:14:22 0/0:0:0:0:0:44:0%:81:1E0:39:44:22:22:44 0/0:0:0:0:0:23:0%:44:1E0:37:23:12:11:23 0/0:0:0:0:0:51:0%:97:1E0:39:51:27:24:54 0/0:0:0:0:0:30:0%:55:1E0:40:30:16:14:30 0/0:0:0:0:0:45:0%:85:1E0:41:45:21:24:45 0/0:0:0:0:0:34:0%:62:1E0:37:34:19:15:34 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:14:0%:25:1E0:39:14:10:4:14 0/0:0:0:0:0:21:0%:40:1E0:38:21:12:9:21 0/0:0:0:0:0:23:0%:44:1E0:38:23:12:11:23 0/0:0:0:0:0:32:0%:59:1E0:39:32:14:18:33 0/0:36:1:1:0:29:3.45%:45:5E-1:40:28:9:19:29 0/0:0:0:0:0:34:0%:62:1E0:40:34:16:18:34 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:31 0/0:0:0:0:0:37:0%:70:1E0:41:37:14:23:38 0/0:0:0:0:0:14:0%:25:1E0:46:14:6:8:16 0/0:0:0:0:0:47:0%:89:1E0:38:47:20:27:48 0/0:0:0:0:0:13:0%:25:1E0:45:13:7:6:13 0/0:0:0:0:0:20:0%:36:1E0:38:20:15:5:20 0/0:0:0:0:0:23:0%:44:1E0:38:23:16:7:23 0/0:0:0:0:0:24:0%:44:1E0:37:24:12:12:24 0/0:0:0:0:0:28:0%:51:1E0:38:28:14:14:28 0/0:0:0:0:0:19:0%:37:1E0:36:19:9:10:19 0/0:0:0:0:0:22:0%:40:1E0:36:22:10:12:22 0/0:0:0:0:0:32:0%:59:1E0:42:32:15:17:34 0/0:0:0:0:0:22:0%:40:1E0:41:22:11:11:23 0/0:0:0:0:0:28:0%:51:1E0:38:28:12:16:28 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:39:0%:74:1E0:41:39:21:18:40 0/0:0:0:0:0:40:0%:74:1E0:41:40:20:20:40 0/0:0:0:0:0:28:0%:51:1E0:41:28:17:11:29 0/0:0:0:0:0:44:0%:81:1E0:38:44:23:21:45 0/0:0:0:0:0:20:0%:36:1E0:41:20:13:7:20 0/0:0:0:0:0:15:0%:29:1E0:38:15:8:7:15 0/0:0:0:0:0:38:0%:70:1E0:40:38:19:19:39 0/0:0:0:0:0:16:0%:29:1E0:40:16:8:8:16 0/0:0:0:0:0:19:0%:37:1E0:43:19:10:9:19 0/0:0:0:0:0:20:0%:36:1E0:42:20:11:9:20 0/0:0:0:0:0:29:0%:55:1E0:36:29:15:14:30 0/0:0:0:0:0:20:0%:36:1E0:39:20:8:12:20 0/0:0:0:0:0:28:0%:51:1E0:44:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 0/0:0:0:0:0:23:0%:44:1E0:39:23:12:11:23 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:28 0/0:0:0:0:0:27:0%:52:1E0:40:27:15:12:27 0/0:0:0:0:0:37:0%:70:1E0:38:37:17:20:38 0/0:0:0:0:0:33:0%:63:1E0:40:33:13:20:34 0/0:0:0:0:0:24:0%:44:1E0:42:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:38:32:17:15:34 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:30 0/0:0:0:0:0:25:0%:48:1E0:40:25:13:12:25 0/0:0:0:0:0:17:0%:33:1E0:43:17:12:5:17 1/1:40:23:4:19:23:100%:99:1.2146E-13:0:0:0:0:24 0/0:0:0:0:0:25:0%:48:1E0:46:25:7:18:25 0/0:0:0:0:0:24:0%:44:1E0:45:24:11:13:26 0/0:0:0:0:0:25:0%:48:1E0:43:25:13:12:26 0/0:0:0:0:0:42:0%:77:1E0:38:42:16:26:45 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:42:0%:77:1E0:39:42:20:22:44 0/0:0:0:0:0:32:0%:59:1E0:41:32:14:18:32 0/0:0:0:0:0:18:0%:32:1E0:36:18:10:8:19 0/0:0:0:0:0:28:0%:51:1E0:39:28:13:15:28 0/0:0:0:0:0:22:0%:40:1E0:39:22:10:12:24 0/0:0:0:0:0:19:0%:37:1E0:40:19:11:8:22 0/0:0:0:0:0:22:0%:40:1E0:40:22:7:15:23 0/0:0:0:0:0:26:0%:47:1E0:38:26:15:11:26 0/0:0:0:0:0:31:0%:59:1E0:38:31:14:17:31 0/0:0:0:0:0:26:0%:47:1E0:36:26:15:11:30 0/0:0:0:0:0:19:0%:37:1E0:37:19:11:8:22 0/0:0:0:0:0:34:0%:62:1E0:38:34:19:15:35 0/0:0:0:0:0:14:0%:25:1E0:38:14:7:7:14 0/0:0:0:0:0:31:0%:59:1E0:38:31:15:16:33 0/0:0:0:0:0:38:0%:70:1E0:38:38:16:22:39 0/0:0:0:0:0:36:0%:66:1E0:38:36:16:20:37 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:35 0/0:0:0:0:0:21:0%:40:1E0:38:21:8:13:23 0/0:0:0:0:0:20:0%:36:1E0:35:20:14:6:22 0/0:0:0:0:0:31:0%:59:1E0:39:31:16:15:32 0/0:0:0:0:0:30:0%:55:1E0:37:30:15:15:32 0/0:0:0:0:0:30:0%:55:1E0:37:30:13:17:34 0/0:0:0:0:0:25:0%:48:1E0:38:25:13:12:25 0/0:0:0:0:0:25:0%:48:1E0:39:25:13:12:25 0/0:0:0:0:0:21:0%:40:1E0:36:21:11:10:22 0/0:0:0:0:0:35:0%:67:1E0:40:35:10:25:35 0/0:0:0:0:0:35:0%:67:1E0:37:35:20:15:36 0/0:0:0:0:0:27:0%:52:1E0:38:27:14:13:27 0/0:0:0:0:0:24:0%:44:1E0:36:24:15:9:25 0/0:0:0:0:0:24:0%:44:1E0:35:24:13:11:27 0/0:0:0:0:0:25:0%:48:1E0:36:25:13:12:25 0/0:0:0:0:0:18:0%:32:1E0:35:18:11:7:19 0/0:0:0:0:0:31:0%:59:1E0:36:31:16:15:31 0/0:0:0:0:0:30:0%:55:1E0:37:30:14:16:33 0/0:0:0:0:0:18:0%:32:1E0:37:18:9:9:19 0/0:0:0:0:0:25:0%:48:1E0:37:25:16:9:26 0/0:0:0:0:0:20:0%:36:1E0:39:20:11:9:21 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:30 0/0:0:0:0:0:22:0%:40:1E0:36:22:5:17:25 0/0:0:0:0:0:24:0%:44:1E0:36:24:11:13:26 0/0:0:0:0:0:17:0%:33:1E0:36:17:5:12:19 0/0:0:0:0:0:17:0%:33:1E0:38:17:10:7:18 0/0:0:0:0:0:33:0%:63:1E0:35:33:14:19:35 0/0:0:0:0:0:29:0%:55:1E0:39:29:16:13:29 0/0:0:0:0:0:31:0%:59:1E0:39:31:12:19:31 0/0:0:0:0:0:30:0%:55:1E0:35:30:16:14:30 0/0:0:0:0:0:35:0%:67:1E0:37:35:20:15:35 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:21 0/0:0:0:0:0:21:0%:40:1E0:38:21:10:11:21 0/0:0:0:0:0:27:0%:52:1E0:40:27:13:14:28 0/0:0:0:0:0:25:0%:48:1E0:39:25:14:11:27 0/0:0:0:0:0:18:0%:32:1E0:39:18:7:11:18 0/0:0:0:0:0:23:0%:44:1E0:40:23:10:13:23 0/0:0:0:0:0:42:0%:77:1E0:37:42:24:18:42 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:41 0/0:0:0:0:0:27:0%:52:1E0:35:27:12:15:28 MTB_anc 4383655 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|stop_gained&splice_region_variant|HIGH|Rv3898c_Rv3898c|gene3981|transcript|Transcript_gene3981|Coding|1/1|c.331C>T|p.Gln111*|331/333|331/333|111/110||WARNING_TRANSCRIPT_NO_STOP_CODON,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4383655G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4383655G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:38:27:11:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:15:5:10:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:48:30:18:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:25:19:6:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:36:28:8:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:39:43:31:12:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:40:31:9:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:19:16:3:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:41:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:38:16:11:5:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:36:26:10:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:39:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:39:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:41:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:49 1/1:40:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:39:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:37:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:36:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:36:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:29:21:8:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:37:20:16:4:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:36:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:37:34:25:9:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:40:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:39:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:31:22:9:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:36:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:37:25:12:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:37:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:39:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:36:30:25:5:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:36:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:38:27:22:5:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:33:26:7:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:37:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:38:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:36:43:31:12:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:38:33:28:5:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:37:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:38:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:39:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:38:35:28:7:35:100%:99:8.9137E-21:0:0:0:0:40 1/1:38:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:26:20:6:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:37:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:32:22:10:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:37:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:39:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:37:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:40:35:27:8:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:41:29:12:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 MTB_anc 4384007 . G C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|Rv3898c_Rv3898c-Rv3899c_Rv3899c|gene3981-gene3982|intergenic_region|gene3981-gene3982|||n.4384007G>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:51:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:46:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:52:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:52:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:50:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:46:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:50:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:49:23:26:49:100%:99:3.925E-29:0:0:0:0:49 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:45:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:50:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:46:14:10:4:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:49:28:21:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:49:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:43:21:22:44:97.73%:99:1.5066E-25:0:0:0:0:44 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:54:23:31:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:12:7:5:12:100%:64:3.698E-7:0:0:0:0:13 1/1:44:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:51:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:52:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:50:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:49:27:8:19:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:52:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:45:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:43:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:47:34:20:14:35:97.14%:99:3.5146E-20:0:0:0:0:35 1/1:44:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:42:21:21:43:97.67%:99:5.9562E-25:0:0:0:0:43 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:49:28:21:49:100%:99:3.925E-29:0:0:0:0:50 1/1:40:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:54:24:30:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:41:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:49:27:22:49:100%:99:3.925E-29:0:0:0:0:52 1/1:41:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:41:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:39:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:40:27:13:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:43:15:28:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:39:64:31:33:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:41:47:27:20:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:50:29:21:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:42:39:22:17:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:43:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:50:23:27:50:100%:99:9.9117E-30:0:0:0:0:50 MTB_anc 4384112 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|intergenic_region|MODIFIER|Rv3898c_Rv3898c-Rv3899c_Rv3899c|gene3981-gene3982|intergenic_region|gene3981-gene3982|||n.4384112C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:42:49:30:19:49:100%:99:3.925E-29:0:0:0:0:49 1/1:54:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:51:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:51:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:50:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:51:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:52:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:48:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:50:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:49:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:46:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:45:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:49:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:48:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:50 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:44:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:46:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:48:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:49:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:48:27:21:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:45:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:47:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:49:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:50:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:48:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:49:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:34:8:26:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:47:33:11:22:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:48:25:23:48:100%:99:1.554E-28:0:0:0:0:51 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:45:24:17:7:24:100%:99:3.101E-14:0:0:0:0:31 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:41:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:43:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:64 1/1:40:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:44:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:39:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:41:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:51:21:30:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:42:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:43 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:46:27:19:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:41:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:54:22:32:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:52:31:21:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:40:49:14:35:49:100%:99:3.925E-29:0:0:0:0:50 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 MTB_anc 4384417 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv3899c_Rv3899c|gene3982|transcript|Transcript_gene3982|Coding|1/1|c.963G>A|p.Leu321Leu|963/1233|963/1233|321/410||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4384417C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4384417C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:62:34:28:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:48:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:48:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:50:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:49:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:50:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:49:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:51:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:47:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:50:24:14:10:24:100%:99:3.101E-14:0:0:0:0:26 1/1:44:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:44:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:47:49:31:18:49:100%:99:3.925E-29:0:0:0:0:51 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:51:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:26:14:12:27:96.3%:99:1.4382E-14:38:1:1:0:27 1/1:50:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:49:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:47:63:26:37:63:100%:99:1.657E-37:0:0:0:0:63 1/1:48:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:60:31:29:60:100%:99:1.035E-35:0:0:0:0:60 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:51:28:23:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:43:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:33:16:17:34:100%:99:1.3852E-19:0:0:0:0:37 1/1:43:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:48:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:53:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:48:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:50:32:18:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:50:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:47:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:47:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:46:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:50:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:49:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:46:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:39:25:14:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:49:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:42:31:11:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:47:43:23:20:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:49:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:45:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:49:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:43:28:16:12:29:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:48:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:46:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:41:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:43:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:56 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:44:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:64:33:31:64:100%:99:4.1752E-38:0:0:0:0:66 1/1:42:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:31 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:59 1/1:39:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:39:21:18:41:97.5%:99:3.8137E-22:39:1:0:1:41 1/1:39:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:50:25:25:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:33:15:18:34:97.06%:99:1.2301E-18:51:1:1:0:34 1/1:39:29:16:13:30:96.67%:99:2.6212E-16:34:1:1:0:31 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 MTB_anc 4385187 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3899c_Rv3899c|gene3982|transcript|Transcript_gene3982|Coding|1/1|c.193C>T|p.Pro65Ser|193/1233|193/1233|65/410||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4385187G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4385187G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=variant-filterI GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:38:11:6:5:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:39:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:19 1/1:38:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:43:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:43:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:46:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:49:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:39:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:39:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:38:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:38:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:19 1/1:41:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:41:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:26 1/1:39:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:40:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:30:7:23:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:37:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:42:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:39:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:36:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:42:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:40:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:17:1:16:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:40:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:39:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:41 1/1:40:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:40:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:37:13:24:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:38:9:29:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:38:41:16:25:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:19:7:12:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:40:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:37:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:43 1/1:41:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:15 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:43:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:13:4:9:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:43:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:20:6:14:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:41:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:41:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:12 1/1:41:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:38:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:27 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:37:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:20:4:16:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:37:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:38:36:12:24:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:37:21:5:16:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:43:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:42:45:18:27:45:100%:99:9.6314E-27:0:0:0:0:48 1/1:42:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:39:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:38:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:37:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:36:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:30 1/1:37:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:32 1/1:38:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:29 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:36:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:40:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:41 1/1:37:36:13:23:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:36:24:10:14:24:100%:99:3.101E-14:0:0:0:0:28 1/1:38:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:38:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:34:11:23:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:37:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:37:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:36:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:37:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:39:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:38:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:36:48:15:33:48:100%:99:1.554E-28:0:0:0:0:51 1/1:38:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:37:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:38:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:38:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:39:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:39:11:28:40:97.5%:99:3.6742E-23:0:0:0:0:40 1/1:42:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:39:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:19 MTB_anc 4385241 . T C . PASS AC=9;AF=0.030;AN=300;ANN=C|missense_variant|MODERATE|Rv3899c_Rv3899c|gene3982|transcript|Transcript_gene3982|Coding|1/1|c.139A>G|p.Met47Val|139/1233|139/1233|47/410||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4385241T>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4385241T>C||||||;NC=0;set GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 0/0:0:0:0:0:56:0%:99:1E0:41:56:29:27:56 0/0:0:0:0:0:11:0%:22:1E0:43:11:6:5:11 0/0:0:0:0:0:37:0%:70:1E0:41:37:20:17:38 0/0:0:0:0:0:19:0%:37:1E0:43:19:9:10:20 1/1:40:22:8:14:23:95.65%:99:2.9149E-12:37:1:0:1:24 0/0:0:0:0:0:23:0%:44:1E0:42:23:13:10:25 0/0:0:0:0:0:28:0%:51:1E0:44:28:11:17:29 0/0:0:0:0:0:27:0%:52:1E0:43:27:12:15:27 0/0:0:0:0:0:20:0%:36:1E0:40:20:7:13:20 0/0:0:0:0:0:23:0%:44:1E0:47:23:13:10:23 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 0/0:0:0:0:0:50:0%:92:1E0:41:50:27:23:53 0/0:0:0:0:0:19:0%:37:1E0:46:19:6:13:19 0/0:0:0:0:0:41:0%:78:1E0:39:41:18:23:43 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:32 0/0:0:0:0:0:33:0%:63:1E0:44:33:17:16:34 0/0:0:0:0:0:16:0%:29:1E0:41:16:11:5:17 0/0:0:0:0:0:32:0%:59:1E0:38:32:15:17:33 0/0:0:0:0:0:19:0%:37:1E0:42:19:9:10:19 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:23 0/0:0:0:0:0:30:0%:55:1E0:41:30:17:13:30 0/0:0:0:0:0:52:0%:96:1E0:40:52:27:25:52 0/0:0:0:0:0:29:0%:55:1E0:44:29:14:15:30 0/0:0:0:0:0:29:0%:55:1E0:41:29:7:22:29 0/0:0:0:0:0:33:0%:63:1E0:38:33:20:13:34 0/0:0:0:0:0:16:0%:29:1E0:42:16:13:3:16 0/0:0:0:0:0:22:0%:40:1E0:41:22:12:10:22 0/1:42:13:4:9:15:86.67%:60:8.7675E-7:38:2:0:2:15 0/0:0:0:0:0:28:0%:51:1E0:40:28:14:14:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:14:14:30 0/0:0:0:0:0:38:0%:70:1E0:41:38:23:15:39 0/0:0:0:0:0:30:0%:55:1E0:41:30:15:15:31 0/0:0:0:0:0:22:0%:40:1E0:47:22:15:7:22 0/0:0:0:0:0:32:0%:59:1E0:39:32:17:15:33 0/0:0:0:0:0:25:0%:48:1E0:43:25:11:14:26 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:21:14:35 0/0:0:0:0:0:51:0%:97:1E0:44:51:25:26:51 0/0:0:0:0:0:43:0%:82:1E0:44:43:21:22:43 0/0:0:0:0:0:37:0%:70:1E0:40:37:19:18:37 0/0:0:0:0:0:25:0%:48:1E0:42:25:13:12:27 0/0:0:0:0:0:29:0%:55:1E0:43:29:18:11:30 0/0:0:0:0:0:27:0%:52:1E0:40:27:8:19:27 0/0:0:0:0:0:26:0%:47:1E0:41:26:11:15:28 0/0:0:0:0:0:42:0%:77:1E0:40:42:17:25:44 0/0:0:0:0:0:39:0%:74:1E0:42:39:18:21:39 0/0:0:0:0:0:25:0%:48:1E0:41:25:11:14:25 0/0:0:0:0:0:35:0%:67:1E0:41:35:14:21:35 0/0:0:0:0:0:41:0%:78:1E0:40:41:16:25:43 0/0:0:0:0:0:37:0%:70:1E0:42:37:17:20:37 0/0:0:0:0:0:15:0%:29:1E0:45:15:9:6:17 0/0:0:0:0:0:46:0%:85:1E0:40:46:26:20:48 0/0:0:0:0:0:18:0%:32:1E0:45:18:7:11:18 0/0:0:0:0:0:34:0%:62:1E0:41:34:17:17:35 0/0:0:0:0:0:31:0%:59:1E0:41:31:14:17:31 0/0:0:0:0:0:48:0%:89:1E0:41:48:28:20:48 0/0:0:0:0:0:32:0%:59:1E0:41:32:15:17:33 0/0:0:0:0:0:32:0%:59:1E0:42:32:18:14:32 0/0:0:0:0:0:28:0%:51:1E0:43:28:17:11:29 0/0:0:0:0:0:35:0%:67:1E0:44:35:19:16:37 0/0:0:0:0:0:27:0%:52:1E0:40:27:14:13:27 0/0:0:0:0:0:34:0%:62:1E0:45:34:13:21:35 0/0:0:0:0:0:38:0%:70:1E0:38:38:18:20:39 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 0/0:0:0:0:0:43:0%:82:1E0:44:43:19:24:44 0/0:0:0:0:0:45:0%:85:1E0:43:45:26:19:46 0/0:0:0:0:0:19:0%:37:1E0:41:19:9:10:19 0/0:0:0:0:0:46:0%:85:1E0:42:46:21:25:46 0/0:0:0:0:0:12:0%:21:1E0:43:12:3:9:12 0/0:0:0:0:0:19:0%:37:1E0:40:19:9:10:19 0/0:0:0:0:0:38:0%:70:1E0:44:38:16:22:39 0/0:0:0:0:0:25:0%:48:1E0:47:25:11:14:26 0/0:0:0:0:0:14:0%:25:1E0:45:14:5:9:14 0/0:0:0:0:0:34:0%:62:1E0:44:34:18:16:35 0/0:0:0:0:0:32:0%:59:1E0:41:32:17:15:33 0/0:0:0:0:0:26:0%:47:1E0:45:26:16:10:27 0/0:0:0:0:0:39:0%:74:1E0:42:39:17:22:41 0/0:0:0:0:0:28:0%:51:1E0:44:28:15:13:29 0/0:0:0:0:0:45:0%:85:1E0:43:45:22:23:45 0/0:0:0:0:0:20:0%:36:1E0:44:20:11:9:20 0/0:0:0:0:0:24:0%:44:1E0:40:24:11:13:26 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 0/0:0:0:0:0:39:0%:74:1E0:40:39:19:20:39 0/0:0:0:0:0:27:0%:52:1E0:46:27:12:15:27 0/0:0:0:0:0:34:0%:62:1E0:40:34:14:20:34 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:28:0%:51:1E0:42:28:15:13:28 0/0:0:0:0:0:8:0%:14:1E0:39:8:4:4:8 0/0:0:0:0:0:22:0%:40:1E0:44:22:10:12:22 0/0:0:0:0:0:26:0%:47:1E0:41:26:9:17:26 0/0:0:0:0:0:23:0%:44:1E0:43:23:14:9:23 0/0:0:0:0:0:17:0%:33:1E0:40:17:5:12:17 0/0:0:0:0:0:58:0%:99:1E0:38:58:30:28:60 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:27 0/0:0:0:0:0:40:0%:74:1E0:43:40:22:18:40 0/0:0:0:0:0:29:0%:55:1E0:41:29:17:12:29 0/0:0:0:0:0:29:0%:55:1E0:40:29:13:16:29 0/0:0:0:0:0:34:0%:62:1E0:40:34:19:15:35 0/0:0:0:0:0:42:0%:77:1E0:37:42:19:23:42 0/0:0:0:0:0:29:0%:55:1E0:41:29:13:16:30 0/0:0:0:0:0:27:0%:52:1E0:42:27:10:17:29 0/0:0:0:0:0:35:0%:67:1E0:40:35:16:19:36 0/0:0:0:0:0:38:0%:70:1E0:38:38:14:24:39 0/0:0:0:0:0:21:0%:40:1E0:39:21:9:12:24 0/0:0:0:0:0:21:0%:40:1E0:40:21:9:12:21 0/0:0:0:0:0:36:0%:66:1E0:43:36:16:20:36 0/0:0:0:0:0:35:0%:67:1E0:43:35:15:20:35 0/0:0:0:0:0:33:0%:63:1E0:42:33:20:13:34 0/0:0:0:0:0:34:0%:62:1E0:44:34:14:20:34 0/0:0:0:0:0:52:0%:96:1E0:42:52:21:31:52 0/0:0:0:0:0:44:0%:81:1E0:45:44:20:24:46 0/0:0:0:0:0:18:0%:32:1E0:42:18:10:8:18 0/0:0:0:0:0:31:0%:59:1E0:40:31:14:17:32 0/0:0:0:0:0:40:0%:74:1E0:39:40:18:22:40 0/0:0:0:0:0:24:0%:44:1E0:37:24:10:14:26 0/0:0:0:0:0:28:0%:51:1E0:39:28:11:17:29 0/0:0:0:0:0:32:0%:59:1E0:39:32:13:19:33 0/0:0:0:0:0:30:0%:55:1E0:43:30:17:13:32 0/0:0:0:0:0:24:0%:44:1E0:37:24:14:10:28 0/0:0:0:0:0:38:0%:70:1E0:38:38:22:16:38 0/0:0:0:0:0:47:0%:89:1E0:40:47:23:24:47 0/0:0:0:0:0:26:0%:47:1E0:42:26:13:13:26 0/0:0:0:0:0:27:0%:52:1E0:37:27:11:16:28 0/0:0:0:0:0:42:0%:77:1E0:38:42:20:22:43 0/0:0:0:0:0:32:0%:59:1E0:41:32:18:14:32 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:32 0/0:0:0:0:0:32:0%:59:1E0:36:32:16:16:34 0/0:0:0:0:0:32:0%:59:1E0:39:32:15:17:34 0/0:0:0:0:0:35:0%:67:1E0:37:35:17:18:38 0/0:0:0:0:0:38:0%:70:1E0:39:38:18:20:39 0/0:0:0:0:0:38:0%:70:1E0:37:38:17:21:39 0/0:0:0:0:0:36:0%:66:1E0:38:36:18:18:38 0/0:0:0:0:0:26:0%:47:1E0:36:26:13:13:28 0/0:0:0:0:0:31:0%:59:1E0:38:31:19:12:33 0/0:0:0:0:0:18:0%:32:1E0:38:18:10:8:18 0/0:0:0:0:0:33:0%:63:1E0:38:33:19:14:33 0/0:39:1:0:1:51:1.96%:84:5E-1:36:50:18:32:54 0/0:0:0:0:0:27:0%:52:1E0:36:27:15:12:27 0/0:0:0:0:0:32:0%:59:1E0:40:32:16:16:33 0/0:0:0:0:0:35:0%:67:1E0:39:35:22:13:37 0/0:0:0:0:0:34:0%:62:1E0:40:34:22:12:34 0/0:0:0:0:0:25:0%:48:1E0:37:25:9:16:25 1/1:42:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:28 0/0:0:0:0:0:40:0%:74:1E0:41:40:23:17:40 0/0:0:0:0:0:35:0%:67:1E0:38:35:17:18:35 0/0:0:0:0:0:20:0%:36:1E0:41:20:8:12:20 1/1:41:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:42:0%:77:1E0:37:42:18:24:44 0/0:0:0:0:0:40:0%:74:1E0:41:40:15:25:43 0/0:0:0:0:0:20:0%:36:1E0:41:20:11:9:20 MTB_anc 4386142 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3900c_Rv3900c|gene3983|transcript|Transcript_gene3983|Coding|1/1|c.167C>T|p.Ser56Leu|167/936|167/936|56/311||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4386142G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4386142G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:55:27:28:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:37:10:27:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:50:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:43:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:49:23:26:49:100%:99:3.925E-29:0:0:0:0:51 1/1:44:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:39 1/1:47:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:29:7:22:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:47:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:54 1/1:41:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:45:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:48:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:58:26:32:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:40:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:41:15:26:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:43:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:58:34:24:58:100%:99:1.6283E-34:0:0:0:0:59 1/1:43:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:24:7:17:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:44:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:44:68:35:33:68:100%:99:1.6809E-40:0:0:0:0:72 1/1:42:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:29:25:4:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:49:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:29:9:20:29:100%:99:3.3259E-17:0:0:0:0:34 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:42:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:49:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:51:23:28:51:100%:99:2.5024E-30:0:0:0:0:55 1/1:39:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:56:27:29:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:42:42:14:28:43:97.67%:99:6.6289E-24:39:1:0:1:43 1/1:43:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:41:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:32 1/1:39:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:37:15:22:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:39:49:18:31:49:100%:99:3.925E-29:0:0:0:0:53 1/1:40:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:40:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:38:69:37:32:69:100%:99:4.233E-41:0:0:0:0:71 1/1:40:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:50:18:32:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:38:37:11:26:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:37:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:40:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:41 1/1:40:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:38:50:19:31:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:43:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:40:56:22:34:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:39:51:17:34:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:39:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:37 MTB_anc 4386709 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|missense_variant|MODERATE|Rv3901c_Rv3901c|gene3984|transcript|Transcript_gene3984|Coding|1/1|c.106G>A|p.Ala36Thr|106/450|106/450|36/149||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Growth_advantage_in_vitroMTB_anc|||n.4386709C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4386709C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:52:33:19:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:47:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:46:47:25:22:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:48:32:19:13:33:96.97%:99:5.4567E-19:0:0:0:0:34 1/1:45:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:49:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:50:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:49:27:22:49:100%:99:3.925E-29:0:0:0:0:49 1/1:47:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:46:53:29:24:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:54:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:52:22:30:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:46:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:47:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:47:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:48:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:46:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:47:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:47:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:48:47:22:25:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:43:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:49:23:26:49:100%:99:3.925E-29:0:0:0:0:50 1/1:47:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:54:25:29:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:43:35:14:21:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:43:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:47:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:47:66:29:37:66:100%:99:2.6498E-39:0:0:0:0:66 1/1:45:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:45:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:50:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:50:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:41:31:17:14:32:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:44:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:44:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:44:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:46:17:29:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:44:19:25:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:41:41:14:27:41:100%:99:2.3541E-24:0:0:0:0:44 1/1:44:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:48:32:11:21:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:44:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:40:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:28:17:11:29:96.55%:99:9.9776E-16:30:1:0:1:30 1/1:42:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:39:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:51:22:29:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:42:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:45:43:14:29:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:48:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:20 1/1:42:58:28:30:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:42:16:26:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:39:23:16:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:41:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:41:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:54:27:27:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:27:11:16:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:48:25:23:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 4393214 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|pcnA_Rv3907c-mutT4_Rv3908|gene3990-gene3991|intergenic_region|gene3990-gene3991|||n.4393214G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:42:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:20:3:17:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:48:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:44:14:5:9:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:45:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:21:9:12:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:52:19:33:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:50:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:22:4:18:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:32:10:22:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:69:34:35:69:100%:99:4.233E-41:0:0:0:0:70 1/1:41:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:40:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:44:15:29:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:47:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:40:21:7:14:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:44:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:49:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:41:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:24:9:15:25:96%:99:3.101E-14:0:0:0:0:26 1/1:40:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:42:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:18:4:14:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:40:31:9:22:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:65:22:43:65:100%:99:1.0519E-38:0:0:0:0:66 1/1:39:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:45:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:41:17:24:42:97.62%:99:2.5612E-23:60:1:0:1:45 1/1:49:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:52:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:8:22:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:24:14:10:24:100%:99:3.101E-14:0:0:0:0:25 1/1:43:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:42:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:42:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:46:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:17:5:12:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:38:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:42:27:9:18:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:41:26:4:22:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:42:15:27:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:38:42:14:28:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:36:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:40:40:14:26:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:38:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:38:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:39:48:11:37:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:38:12:26:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:39:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:29:11:18:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:48:22:26:48:100%:99:1.554E-28:0:0:0:0:49 1/1:39:40:12:28:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:38:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:39:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:39:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:48:24:24:48:100%:99:1.554E-28:0:0:0:0:51 1/1:40:49:19:30:49:100%:99:3.925E-29:0:0:0:0:49 1/1:40:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:37:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:46:15:31:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:40:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:37:39:8:31:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:38:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:41:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:37:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:18:8:10:19:94.74%:92:5.6585E-10:35:1:1:0:19 1/1:41:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:39:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:30 MTB_anc 4394210 . C G . PASS AC=300;AF=1.00;AN=300;ANN=G|missense_variant|MODERATE|Rv3909_Rv3909|gene3992|transcript|Transcript_gene3992|Coding|1/1|c.19C>G|p.Arg7Gly|19/2409|19/2409|7/802||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4394210C>G||||||,G|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4394210C>G||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:56 1/1:50:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:56:29:27:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:46:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:26:11:15:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:50:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:49:25:7:18:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:43:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:52:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:21:16:5:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:49:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:48:25:23:48:100%:99:1.554E-28:0:0:0:0:50 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:48:25:8:17:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:43:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:51:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:52:25:27:53:98.11%:99:6.3169E-31:0:0:0:0:53 1/1:43:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:59:34:25:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:46:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:44:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:45:22:23:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:40:21:19:41:97.56%:99:9.3017E-24:0:0:0:0:41 1/1:49:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:57:26:31:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:42:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:50:27:23:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:47:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:37:14:23:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:50:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:47:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:46:19:27:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:44:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:43:17:26:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:46:55:25:30:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:44:26:8:18:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:43:25:18:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:50:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:21:10:11:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:50:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:60:27:33:60:100%:99:1.035E-35:0:0:0:0:61 1/1:49:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:44:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:43:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:47:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:50:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:42:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:42:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:44:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:48:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:44:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:38:11:27:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:12:17:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:41:45:32:13:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:55:33:22:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:41:52:27:25:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:42:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:38:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:42:35:13:22:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:44:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:38:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:40:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:57 1/1:40:51:26:25:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:42:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:39:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:41:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:39:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:48:21:27:48:100%:99:1.554E-28:0:0:0:0:48 1/1:44:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:38:13:25:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:38:60:21:39:60:100%:99:1.035E-35:0:0:0:0:61 1/1:42:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:43:45:20:25:46:97.83%:99:9.6314E-27:0:0:0:0:46 1/1:41:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:45:25:10:15:26:96.15%:99:7.9107E-15:0:0:0:0:27 1/1:47:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:43:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:42:33:18:15:34:97.06%:99:1.3852E-19:0:0:0:0:34 1/1:41:41:23:18:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:61:25:36:61:100%:99:2.609E-36:0:0:0:0:61 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:45 MTB_anc 4395387 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|Rv3909_Rv3909|gene3992|transcript|Transcript_gene3992|Coding|1/1|c.1196G>A|p.Ser399Asn|1196/2409|1196/2409|399/802||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_in_vitro|||n.4395387G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4395387G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:17:7:10:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:33:14:19:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:50:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:43:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:43:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:41:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:38:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:53:28:25:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:45:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:21:8:13:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:29:13:16:30:96.67%:99:2.6212E-16:30:1:0:1:32 1/1:41:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:62:30:32:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:41:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:24:13:11:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:58 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:41:44:16:28:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:39:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:50 1/1:45:32:15:17:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:17:12:5:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:40:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:47:24:7:17:24:100%:99:3.101E-14:0:0:0:0:24 1/1:40:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:39:27:15:12:28:100%:99:5.1363E-16:0:0:0:0:29 1/1:41:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:47:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:48:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:42 1/1:42:39:17:22:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:43 1/1:44:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:49:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:17:6:11:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:44:24:12:12:24:100%:99:3.101E-14:0:0:0:0:25 1/1:51:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:50:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:36:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:40:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:42:24:11:13:24:100%:99:3.101E-14:0:0:0:0:25 1/1:40:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:39:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:47:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:17:4:13:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:45:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:52:21:31:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:42:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:27:12:15:28:100%:99:5.1363E-16:0:0:0:0:28 1/1:42:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:39:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:45:34:13:21:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:42:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:26:9:17:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:38:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:39:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:37:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:24:8:16:24:100%:99:3.101E-14:0:0:0:0:25 1/1:41:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:39:19:15:4:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:38:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:36:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:40:26:14:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:36:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:40:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:39:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:37:57:27:30:57:100%:99:6.4572E-34:0:0:0:0:58 1/1:40:41:25:16:42:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:28:8:20:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:39:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:44:38:16:22:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:41:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:32:8:24:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:40:59:27:32:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 MTB_anc 4399185 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv3910_Rv3910|gene3993|transcript|Transcript_gene3993|Coding|1/1|c.2589C>T|p.Arg863Arg|2589/3555|2589/3555|863/1184||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitro|||n.4399185C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4399185C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:38:43:24:19:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:42:21:11:10:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:39:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:21 1/1:40:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:40:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:40:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:40:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:38:45:33:12:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:9:6:3:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:38:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:40:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:15:9:6:16:93.75%:75:2.8282E-8:37:1:1:0:16 1/1:40:23:19:4:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:44:31:13:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:36:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:29 1/1:39:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:38:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:38:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:39:39:27:12:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:37:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:39:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:23 1/1:44:25:17:8:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:36:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:33 1/1:37:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:40:52:28:24:52:100%:99:6.3169E-31:0:0:0:0:52 1/1:38:32:23:9:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:36:33:25:8:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:38:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:37:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:35:17:11:6:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:38:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:37:39:31:8:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:41:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:38:42:27:15:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:35:25:10:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:19:13:6:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:38:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:36:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:42:29:13:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:39:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:38:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:37:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:37:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:37:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:36:34:28:6:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:39:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:37:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:39:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:39:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:40:13:9:4:13:100%:70:9.6148E-8:0:0:0:0:15 1/1:38:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:31 1/1:40:23:18:5:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:40:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:25:16:9:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:39:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:36:34:23:11:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:36:24:12:36:100%:99:2.2598E-21:0:0:0:0:39 1/1:37:24:17:7:24:100%:99:3.101E-14:0:0:0:0:27 1/1:38:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:37:22:16:6:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:38:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:38:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:12:10:2:12:100%:64:3.698E-7:0:0:0:0:12 1/1:41:27:19:8:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:37:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:18 1/1:39:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:37:55:39:16:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:39:47:34:13:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:39:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:38:16:6:10:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:37:24:20:4:24:100%:99:3.101E-14:0:0:0:0:25 1/1:37:22:17:5:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:28:21:7:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:35:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:36:18:13:5:18:100%:99:1.1019E-10:0:0:0:0:19 1/1:38:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:40:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:38:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:40:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:41:22:8:14:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:35:23:20:3:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:39:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:38:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:36:37:26:11:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:36:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:38:17:13:4:17:100%:93:4.2852E-10:0:0:0:0:19 1/1:38:21:14:7:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:38:46:32:14:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:37:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:36:23:17:6:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:38:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:21 1/1:36:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:36:27:20:7:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:36:41:30:11:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:38:16:12:4:16:100%:87:1.6637E-9:0:0:0:0:17 1/1:36:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:36 1/1:36:23:15:8:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:36:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:28 1/1:37:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:37:20:13:7:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:38:22:18:4:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:37:43:29:14:43:100%:99:1.5066E-25:0:0:0:0:46 1/1:37:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:39:33:24:9:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:38:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:39:41:26:15:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:37:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:36:25:20:5:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:36:21:17:4:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:37:16:9:7:16:100%:87:1.6637E-9:0:0:0:0:18 1/1:37:35:24:11:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:38:48:31:17:48:100%:99:1.554E-28:0:0:0:0:48 1/1:38:34:24:10:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:38:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 MTB_anc 4400246 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|missense_variant|MODERATE|sigM_Rv3911|gene3994|transcript|Transcript_gene3994|Coding|1/1|c.61G>A|p.Asp21Asn|61/669|61/669|21/222||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4400246G>A||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.4400246G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:52:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:48:24:24:48:100%:99:1.554E-28:0:0:0:0:48 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:47:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:42:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:48:21:15:6:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:42:58:27:31:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:43:31:15:16:32:96.88%:99:1.8007E-17:38:1:0:1:33 1/1:44:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:43:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:48:22:26:48:100%:99:1.554E-28:0:0:0:0:48 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:47:29:18:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:46:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:20:8:12:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:42:20:15:5:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:42:19:23:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:46:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:46:67:36:31:67:100%:99:6.6743E-40:0:0:0:0:67 1/1:45:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:41:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:44:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:48:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:45:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:54:26:28:54:100%:99:4.0229E-32:0:0:0:0:55 1/1:45:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:42:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:44:22:22:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:56:30:26:56:100%:99:2.5602E-33:0:0:0:0:56 1/1:45:23:16:7:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:48 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:36:14:22:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:44:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:43:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:48:24:12:12:25:96%:99:2.0568E-13:38:1:1:0:25 1/1:46:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:31:21:10:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:47:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:50:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:50:30:13:17:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:47 1/1:42:14:6:8:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:33:10:23:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:51:27:24:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:41:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:48:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:19:6:13:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:46:33:22:11:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:50:17:10:7:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:44:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:54:28:26:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:42:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:40:43:16:27:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:43:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:48:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:42:15:3:12:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:44:27:17:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:42:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:39:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:23 1/1:41:41:27:14:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:38:31:20:11:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:39:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:40:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:45:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:45:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:43:43:19:24:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:44:53:23:30:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:39:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:39:43:26:17:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:37:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:39:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:42 1/1:42:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:41:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:38:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:38:27:18:9:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:26 1/1:40:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:39:47:25:22:48:97.92%:99:7.6145E-27:60:1:0:1:49 1/1:43:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:50:28:22:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:39:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:40:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:31:11:20:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:39:12:27:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:42:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:40:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 MTB_anc 4400660 . AC A . PASS AC=295;AF=0.990;AN=298;ANN=A|frameshift_variant|HIGH|sigM_Rv3911|gene3994|transcript|Transcript_gene3994|Coding|1/1|c.478delC|p.Arg160fs|478/669|478/669|160/222||INFO_REALIGN_3_PRIME,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4400661delC||||||,A|custom|MODIFIER|||CUSTOM&additionnal_annotations|information_pathways|||n.4400661delC||||||;LOF=(sigM_Rv3911|gene3994|1|1.00);WT=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:39:23:14:9:23:95.83%:99:7.7525E-13:34:1:1:0:24 1/1:47:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:43:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:14:6:8:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:42:16:12:4:16:94.12%:81:7.7134E-9:33:1:0:1:17 1/1:48:14:8:6:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:47:20:5:15:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:15:10:5:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:45:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:49:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:19:9:10:18:95%:98:1.5234E-10:33:1:1:0:20 1/1:41:24:14:10:24:96%:99:2.0568E-13:32:1:0:1:25 1/1:52:7:2:5:7:100%:35:2.9138E-4:0:0:0:0:7 1/1:36:21:12:9:18:100%:99:1.8578E-12:0:0:0:0:21 1/1:43:17:10:7:18:94.44%:86:2.0936E-9:29:1:1:0:18 1/1:41:19:11:8:21:90.48%:93:4.7003E-10:32:2:1:1:21 1/1:44:14:2:12:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:11:5:6:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:45:17:9:8:18:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:40:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:48:18:9:9:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:15:7:8:14:100%:81:6.4467E-9:0:0:0:0:15 0/1:39:24:12:12:27:88.89%:99:2.0853E-12:33:3:0:3:27 1/1:40:8:4:4:8:100%:41:7.77E-5:0:0:0:0:8 1/1:41:14:8:6:13:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:10:3:7:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:38:19:8:11:17:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:16:11:5:16:94.12%:81:7.7134E-9:37:1:1:0:17 1/1:43:35:19:16:35:97.22%:99:8.3613E-20:33:1:0:1:36 1/1:36:20:13:7:19:100%:99:7.2544E-12:0:0:0:0:20 1/1:48:16:7:9:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:40:24:10:14:24:96%:99:2.0568E-13:29:1:1:0:25 1/1:43:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:34:17:17:36:94.44%:99:1.5887E-18:33:2:0:2:36 1/1:42:27:15:12:28:96.43%:99:3.7915E-15:29:1:1:0:28 1/1:45:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:23:11:12:24:95.83%:99:7.7525E-13:32:1:0:1:24 1/1:39:26:16:10:27:96.3%:99:1.4382E-14:32:1:0:1:27 1/1:36:30:13:17:29:93.75%:99:3.0612E-16:33:2:1:1:32 1/1:40:36:20:16:37:97.3%:99:2.1762E-20:34:1:1:0:37 1/1:41:17:7:10:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:37:17:10:7:17:94.44%:86:2.0936E-9:33:1:0:1:19 1/1:41:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:24:16:8:24:100%:99:3.101E-14:0:0:0:0:24 1/1:43:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:37:28:13:15:24:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:44:23:8:15:22:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:36:28:12:16:28:96.55%:99:9.9776E-16:32:1:0:1:30 1/1:39:10:8:2:11:90.91%:47:1.7011E-5:38:1:1:0:11 1/1:46:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:18:7:11:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:32:14:18:30:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:19:10:9:18:100%:99:2.8292E-11:0:0:0:0:20 1/1:38:17:6:11:18:94.44%:86:2.0936E-9:34:1:0:1:18 1/1:40:24:11:13:22:100%:99:3.101E-14:0:0:0:0:24 1/1:41:19:8:11:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:22:14:8:21:100%:99:4.7526E-13:0:0:0:0:22 1/1:38:16:8:8:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:11:8:3:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:42:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:29:16:13:28:96.67%:99:2.6212E-16:32:1:0:1:30 1/1:42:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:28:15:13:27:100%:99:1.3074E-16:0:0:0:0:28 0/1:43:8:4:4:9:88.89%:36:2.0568E-4:34:1:0:1:9 1/1:39:17:13:4:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:48:18:6:12:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:9:5:4:9:100%:46:2.0568E-5:0:0:0:0:9 1/1:44:18:8:10:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:39:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:43:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:40:22:11:11:23:91.67%:99:1.0078E-11:45:2:2:0:24 1/1:46:21:9:12:22:95.45%:99:1.0931E-11:60:1:1:0:22 1/1:41:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:31:16:15:30:100%:99:2.1486E-18:0:0:0:0:31 1/1:41:36:20:16:32:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:39:27:16:11:26:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:21:17:4:20:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:13:6:7:14:92.86%:64:3.7391E-7:34:1:0:1:14 1/1:45:13:7:6:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:41:18:8:10:20:90%:87:1.6758E-9:33:2:0:2:20 1/1:47:14:3:11:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:51:10:3:7:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:45:10:6:4:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:39:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:15:7:8:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:10:4:6:10:100%:52:5.4125E-6:0:0:0:0:11 1/1:37:18:12:6:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:26:14:12:27:96.3%:99:1.4382E-14:33:1:0:1:27 1/1:38:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:40:19:7:12:20:95%:98:1.5234E-10:34:1:0:1:20 1/1:39:21:9:12:19:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:23:12:11:22:100%:99:1.2146E-13:0:0:0:0:24 1/1:37:19:12:7:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:38:17:10:7:16:100%:93:4.2852E-10:0:0:0:0:17 ./.:.:.:.:.:.:.:.:.:.:.:.:.:6 1/1:38:17:7:10:16:100%:93:4.2852E-10:0:0:0:0:17 1/1:41:19:8:11:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:40:22:13:9:23:95.65%:99:2.9149E-12:29:1:1:0:23 1/1:39:18:10:8:17:100%:99:1.1019E-10:0:0:0:0:18 1/1:41:25:14:11:24:100%:99:7.9107E-15:0:0:0:0:25 1/1:39:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:38:15:7:8:16:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:39:12:6:6:12:100%:64:3.698E-7:0:0:0:0:12 1/1:39:29:20:9:29:96.67%:99:2.6212E-16:34:1:0:1:30 1/1:31:12:9:3:11:92.31%:58:1.3461E-6:32:1:0:1:13 1/1:36:16:9:7:15:100%:87:1.6637E-9:0:0:0:0:16 1/1:37:16:5:11:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:15:9:6:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:38:14:9:5:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:41:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:20:13:7:22:90.91%:98:1.3117E-10:35:2:1:1:22 1/1:41:15:10:5:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:34:10:5:5:9:100%:52:5.4125E-6:0:0:0:0:10 1/1:33:17:10:7:13:100%:93:4.2852E-10:0:0:0:0:17 1/1:36:21:10:11:18:100%:99:1.8578E-12:0:0:0:0:21 1/1:33:13:5:8:13:100%:70:9.6148E-8:0:0:0:0:14 1/1:33:15:6:9:15:93.75%:75:2.8282E-8:32:1:0:1:16 1/1:37:15:10:5:14:100%:81:6.4467E-9:0:0:0:0:15 1/1:39:12:6:6:13:92.31%:58:1.3461E-6:34:1:0:1:13 1/1:39:19:11:8:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:41:12:6:6:12:100%:64:3.698E-7:0:0:0:0:13 1/1:35:18:10:8:14:100%:99:1.1019E-10:0:0:0:0:18 1/1:37:10:5:5:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:36:18:8:10:20:90%:87:1.6758E-9:33:2:1:1:20 1/1:39:14:7:7:15:93.33%:69:1.0315E-7:34:1:0:1:15 1/1:39:19:11:8:19:95%:98:1.5234E-10:34:1:1:0:21 1/1:38:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:33:10:5:5:8:100%:52:5.4125E-6:0:0:0:0:10 1/1:49:13:8:5:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:37:11:4:7:10:100%:58:1.4176E-6:0:0:0:0:11 1/1:40:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:41:15:7:8:16:93.75%:75:2.8282E-8:35:1:0:1:16 1/1:40:15:9:6:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:47:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:38:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 0/1:37:7:4:3:8:87.5%:31:6.993E-4:32:1:1:0:8 1/1:41:21:12:9:22:95.45%:99:1.0931E-11:32:1:0:1:22 1/1:42:15:5:10:16:93.75%:75:2.8282E-8:33:1:0:1:16 1/1:37:19:7:12:18:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:15:8:7:15:100%:81:6.4467E-9:0:0:0:0:15 MTB_anc 4404832 . G T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|Rv3916c_Rv3916c|gene3999|transcript|Transcript_gene3999|Coding|1/1|c.336C>A|p.Gly112Gly|336/735|336/735|112/244||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4404832G>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|conserved_hypotheticals|||n.4404832G>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:48:25:23:48:100%:99:1.554E-28:0:0:0:0:49 1/1:52:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:44:55:30:25:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:47:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:49:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:49:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:48:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:52:29:23:52:100%:99:6.3169E-31:0:0:0:0:53 1/1:43:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:15:6:9:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:25 1/1:49:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:47:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:44:60:30:30:60:100%:99:1.035E-35:0:0:0:0:61 1/1:50:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:48:42:21:21:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:48:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:47:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:44:34:18:16:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:39 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:42:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:47:51:25:26:51:100%:99:2.5024E-30:0:0:0:0:53 1/1:44:32:12:20:32:100%:99:5.4567E-19:0:0:0:0:35 1/1:44:42:18:24:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:44:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:44:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:46:42:20:22:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:45:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:42:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:50:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:47:15:7:8:15:100%:81:6.4467E-9:0:0:0:0:16 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:45:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:43:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:48 1/1:43:35:19:16:36:97.22%:99:8.3613E-20:60:1:0:1:38 1/1:45:24:8:16:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:45:21:24:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:44:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:51 1/1:46:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:54:29:25:54:100%:99:4.0229E-32:0:0:0:0:57 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:24:15:9:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:54:29:10:19:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:48:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:50:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:44:42:25:17:42:100%:99:5.9562E-25:0:0:0:0:43 1/1:49:23:7:16:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:33:23:10:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:52:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:43:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:45:19:26:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:43:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:43:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:46:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:36 1/1:40:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:49:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:47:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:47:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:47:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:55:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:40:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:43:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:45 1/1:44:19:10:9:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:43:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:47:36:16:20:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:41:40:16:24:40:100%:99:9.3017E-24:0:0:0:0:44 1/1:43:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:47:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:45:44:17:27:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:43:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:26:18:8:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:47:28:16:12:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:24:13:11:24:100%:99:3.101E-14:0:0:0:0:24 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:45:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:22 1/1:42:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:48:21:27:48:100%:99:1.554E-28:0:0:0:0:50 1/1:41:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:44:55:26:29:55:100%:99:1.0149E-32:0:0:0:0:55 1/1:42:49:27:22:49:100%:99:3.925E-29:0:0:0:0:50 1/1:44:19:9:10:20:95%:99:2.8292E-11:0:0:0:0:20 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:64:30:34:64:100%:99:4.1752E-38:0:0:0:0:67 1/1:40:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:55 1/1:41:56:26:30:56:100%:99:2.5602E-33:0:0:0:0:59 1/1:40:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:50:26:24:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:41:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:46:20:26:46:100%:99:2.4343E-27:0:0:0:0:47 1/1:42:33:12:21:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:36 1/1:40:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:40:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:43:49:22:27:49:100%:99:3.925E-29:0:0:0:0:50 1/1:42:41:24:17:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:41:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:46:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:44:25:16:9:26:100%:99:7.9107E-15:0:0:0:0:28 1/1:43:37:19:18:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:34:16:18:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:41:21:20:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:55:29:26:55:100%:99:1.0149E-32:0:0:0:0:56 1/1:42:37:16:21:37:100%:99:5.7269E-22:0:0:0:0:38 MTB_anc 4407588 . C T . PASS AC=300;AF=1.00;AN=300;ANN=T|synonymous_variant|LOW|gid_Rv3919c|gene4002|transcript|Transcript_gene4002|Coding|1/1|c.615G>A|p.Ala205Ala|615/675|615/675|205/224||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|Non_essential_in_vitro|||n.4407588C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4407588C>T||||||,T|custom|MODIFIER|||CUSTOM&additionnal_annotations|streptomycin|||n.4407588C>T||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:45:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:51:22:9:13:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:52:23:29:52:100%:99:6.3169E-31:0:0:0:0:54 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:24:13:11:24:100%:99:3.101E-14:0:0:0:0:25 1/1:47:31:12:19:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:48:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:40:28:7:21:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:46:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:48:32:14:18:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:50:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:53:27:26:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:46:12:9:3:12:100%:64:3.698E-7:0:0:0:0:13 1/1:43:61:35:26:61:100%:99:2.609E-36:0:0:0:0:62 1/1:45:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:47:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:45:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:48:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:43:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:45:56:24:32:57:98.25%:99:3.7452E-32:60:1:0:1:59 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:43:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:48:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:47:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:51:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:45:27:12:15:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:43:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:44:24:14:10:24:100%:99:3.101E-14:0:0:0:0:24 1/1:48:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:44:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:33:13:20:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:44:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:49 1/1:48:73:33:40:73:100%:99:1.7006E-43:0:0:0:0:74 1/1:46:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:45:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:43:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:34 1/1:42:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:44:20:7:13:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:39:31:17:14:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:46:21:25:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:41:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:39:50:20:30:50:100%:99:9.9117E-30:0:0:0:0:50 1/1:46:39:18:21:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:45:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:41:40:15:25:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:49:22:7:15:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:48:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:45:47:21:26:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:42:45:16:29:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:46:28:13:15:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:53:25:28:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:46:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:42:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:45:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:46:61:29:32:61:100%:99:2.609E-36:0:0:0:0:61 1/1:49:35:15:20:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:48:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:14 1/1:46:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:45:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:33 1/1:50:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:50:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:52:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:43:18:25:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:49:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:45:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:50:32:17:15:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:38 1/1:44:33:16:17:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:42:32:21:11:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:43:46:25:21:47:97.87%:99:2.4343E-27:0:0:0:0:47 1/1:44:42:24:18:42:100%:99:5.9562E-25:0:0:0:0:44 1/1:48:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:45:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:41:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:49:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:45:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:51:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:58:23:35:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:45:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:26:21:5:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:41:31:15:16:31:100%:99:2.1486E-18:0:0:0:0:35 1/1:41:40:19:21:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:20:10:10:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:42:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:37 1/1:44:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:47:46:23:23:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:45:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:41:19:22:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:39:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:43:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:44:43:20:23:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:40:46:18:28:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:42:41:20:21:41:100%:99:2.3541E-24:0:0:0:0:43 1/1:40:47:20:27:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:38:17:21:39:97.44%:99:1.4697E-21:37:1:0:1:39 1/1:42:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:42:63:27:36:63:100%:99:1.657E-37:0:0:0:0:63 1/1:41:47:17:30:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:44:42:22:20:43:97.67%:99:6.6289E-24:37:1:0:1:43 1/1:40:44:18:26:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:41:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:41:39:19:20:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:37:38:15:23:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:42:22:20:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:43:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:53:24:29:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:38:30:14:16:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:42:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:36:14:22:37:97.3%:99:2.1762E-20:38:1:1:0:39 1/1:40:24:10:14:24:100%:99:3.101E-14:0:0:0:0:25 1/1:39:44:21:23:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:38:70:35:35:70:100%:99:1.0659E-41:0:0:0:0:72 1/1:38:48:26:22:48:100%:99:1.554E-28:0:0:0:0:48 1/1:42:48:23:25:48:100%:99:1.554E-28:0:0:0:0:49 1/1:44:35:21:14:36:97.22%:99:8.9137E-21:0:0:0:0:36 1/1:43:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:41 1/1:44:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:42:39:15:24:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:42:40:23:17:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:41:36:15:21:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:34:12:22:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:52 1/1:43:59:35:24:59:100%:99:4.1056E-35:0:0:0:0:59 1/1:44:35:12:23:35:100%:99:8.9137E-21:0:0:0:0:35 MTB_anc 4408920 . G A . PASS AC=300;AF=1.00;AN=300;ANN=A|intergenic_region|MODIFIER|Rv3920c_Rv3920c-Rv3921c_Rv3921c|gene4003-gene4004|intergenic_region|gene4003-gene4004|||n.4408920G>A||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:50:30:20:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:50:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:61:34:27:61:100%:99:2.609E-36:0:0:0:0:62 1/1:47:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:43:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:44 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:35:20:15:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:30:18:12:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:33:19:14:34:97.06%:99:1.2301E-18:26:1:1:0:34 1/1:40:24:12:12:24:100%:99:3.101E-14:0:0:0:0:24 1/1:45:24:10:14:24:100%:99:3.101E-14:0:0:0:0:26 1/1:47:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:34 1/1:49:17:8:9:18:94.44%:86:2.0936E-9:38:1:1:0:18 1/1:44:28:22:6:28:100%:99:1.3074E-16:0:0:0:0:31 1/1:41:40:25:15:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:43:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:46:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:33:17:16:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:44:10:7:3:10:100%:52:5.4125E-6:0:0:0:0:10 1/1:46:38:20:18:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:42:28:9:19:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:43:23:12:11:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:51:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:44:28:16:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:42:47:26:21:47:100%:99:6.1512E-28:0:0:0:0:47 1/1:43:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:60:31:29:60:100%:99:1.035E-35:0:0:0:0:62 1/1:45:49:31:18:50:98%:99:3.925E-29:0:0:0:0:53 1/1:46:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:44:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:28:17:11:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:47:19:14:5:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:47:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:53:31:22:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:50:28:22:51:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:45:28:17:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:47:44:25:19:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:47:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:44:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:37 1/1:43:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:23:13:10:23:100%:99:1.2146E-13:0:0:0:0:24 1/1:42:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:42:30:20:10:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:41:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:45:29:16:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:45:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:43:34:26:8:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:40:48:28:20:48:100%:99:1.554E-28:0:0:0:0:51 1/1:45:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:47:66:42:24:66:100%:99:2.6498E-39:0:0:0:0:70 1/1:44:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:44:38:26:12:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:46:13:10:3:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:46 1/1:48:29:13:16:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:47:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:49 1/1:44:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:41:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:41:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:27:14:13:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:48:40:22:18:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:43:57:30:27:58:98.28%:99:6.4572E-34:0:0:0:0:58 1/1:45:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:46:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:26:19:7:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:46:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:29:14:15:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:46:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:42:36:23:13:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:47:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:43:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:28:19:9:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:43:37:19:18:38:100%:99:5.7269E-22:0:0:0:0:40 1/1:43:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:22 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:43:34:21:13:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:42:30:21:9:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:35:22:13:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:43:18:11:7:18:100%:99:1.1019E-10:0:0:0:0:20 1/1:42:20:14:6:20:100%:99:7.2544E-12:0:0:0:0:22 1/1:49:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:42:38:23:15:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:40:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:43 1/1:43:30:12:18:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:39:25:18:7:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:39:20:19:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:17:8:9:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:41:38:22:16:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:42:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:41:32:19:13:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:22:11:11:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:41:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:41:46:26:20:47:97.87%:99:2.9526E-26:38:1:1:0:48 1/1:40:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:39:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:36 1/1:40:38:17:21:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:28:15:13:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:41:34:14:20:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:39:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:32 1/1:41:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:38 1/1:39:33:15:18:33:100%:99:1.3852E-19:0:0:0:0:35 1/1:40:43:21:22:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:41:29:18:11:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:42:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:23:8:15:23:100%:99:1.2146E-13:0:0:0:0:25 1/1:40:41:18:23:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:41:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:54 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:42 1/1:42:38:19:19:38:100%:99:1.4508E-22:0:0:0:0:40 1/1:41:46:25:21:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:36:17:19:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:25:10:15:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:43:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:41:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:19:8:11:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:44:35:19:16:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:45:40:28:12:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:46:59:28:31:59:100%:99:4.1056E-35:0:0:0:0:60 1/1:43:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 4408923 . T C . PASS AC=300;AF=1.00;AN=300;ANN=C|intergenic_region|MODIFIER|Rv3920c_Rv3920c-Rv3921c_Rv3921c|gene4003-gene4004|intergenic_region|gene4003-gene4004|||n.4408923T>C||||||;HET=0;HOM=1;NC=0;WT=0;set=Intersection GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:43:51:30:21:51:100%:99:2.5024E-30:0:0:0:0:52 1/1:51:16:10:6:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:44:63:35:28:64:98.44%:99:2.7139E-36:37:1:0:1:64 1/1:46:22:13:9:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:41:30:16:14:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:45:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:42:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:26:14:12:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:46:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:46:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:40:46:29:17:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:43:21:13:8:21:100%:99:1.8578E-12:0:0:0:0:21 1/1:46:36:21:15:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:45:31:19:12:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:45:34:20:14:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:39:25:12:13:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:44:25:11:14:25:100%:99:7.9107E-15:0:0:0:0:27 1/1:45:31:10:21:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:48:16:7:9:17:94.12%:81:7.7134E-9:24:1:1:0:17 1/1:43:28:23:5:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:43:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:38 1/1:45:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:43:28:18:10:28:100%:99:1.3074E-16:0:0:0:0:28 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:43:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:11:7:4:11:100%:58:1.4176E-6:0:0:0:0:11 1/1:44:36:20:16:37:97.3%:99:2.2598E-21:0:0:0:0:38 1/1:41:30:10:20:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:22:14:36:100%:99:2.2598E-21:0:0:0:0:36 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:24 1/1:51:25:13:12:25:100%:99:7.9107E-15:0:0:0:0:26 1/1:41:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:46:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:42:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:45:58:29:29:58:100%:99:1.6283E-34:0:0:0:0:61 1/1:44:53:32:21:53:100%:99:1.5943E-31:0:0:0:0:53 1/1:44:45:27:18:46:97.83%:99:1.1441E-25:50:1:0:1:47 1/1:43:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:45:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:44:18:14:4:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:45:30:15:15:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:40:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:54:31:23:54:100%:99:4.0229E-32:0:0:0:0:54 1/1:44:34:17:17:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:39:49:27:22:50:100%:99:3.925E-29:0:0:0:0:51 1/1:44:46:28:18:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:45:45:25:20:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:46:18:10:8:18:100%:99:1.1019E-10:0:0:0:0:18 1/1:42:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:42:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:44:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:43:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:42:62:31:31:62:100%:99:6.5755E-37:0:0:0:0:65 1/1:41:33:21:12:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:40:27:10:17:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:42:44:29:15:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:41:22:19:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:42:35:26:9:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:42:44:26:18:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:38:51:29:22:51:100%:99:2.5024E-30:0:0:0:0:51 1/1:44:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:45:32:20:12:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:69:44:25:69:100%:99:4.233E-41:0:0:0:0:70 1/1:43:42:23:19:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:42:43:28:15:43:100%:99:1.5066E-25:0:0:0:0:43 1/1:49:13:6:7:13:100%:70:9.6148E-8:0:0:0:0:13 1/1:44:15:11:4:15:100%:81:6.4467E-9:0:0:0:0:15 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 1/1:44:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:46:22:10:12:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:45:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:44 1/1:43:47:24:23:48:97.92%:99:7.6145E-27:32:1:0:1:51 1/1:43:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:39:30:19:11:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:44:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:40:33:19:14:33:100%:99:1.3852E-19:0:0:0:0:34 1/1:39:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:48:39:22:17:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:58:30:28:58:100%:99:1.6283E-34:0:0:0:0:58 1/1:44:38:24:14:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:44:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:41:37:22:15:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:44:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:45:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:45:28:14:14:28:100%:99:1.3074E-16:0:0:0:0:29 1/1:46:19:9:10:19:100%:99:2.8292E-11:0:0:0:0:19 1/1:42:35:23:12:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:46:17:9:8:17:100%:93:4.2852E-10:0:0:0:0:17 1/1:42:56:28:28:56:100%:99:2.5602E-33:0:0:0:0:57 1/1:46:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:27 1/1:42:38:19:19:39:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:33:18:15:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:20:12:8:20:100%:99:7.2544E-12:0:0:0:0:21 1/1:40:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:39:16:23:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:43:33:20:13:33:100%:99:1.3852E-19:0:0:0:0:33 1/1:41:30:21:9:31:96.77%:99:6.8754E-17:32:1:1:0:31 1/1:44:34:22:12:34:100%:99:3.5146E-20:0:0:0:0:35 1/1:41:26:16:10:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:43:19:12:7:19:100%:99:2.8292E-11:0:0:0:0:20 1/1:42:22:15:7:22:100%:99:4.7526E-13:0:0:0:0:22 1/1:47:26:17:9:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:45:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 1/1:41:37:23:14:37:100%:99:5.7269E-22:0:0:0:0:38 1/1:40:41:25:16:41:100%:99:2.3541E-24:0:0:0:0:45 1/1:43:28:12:16:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:38:24:18:6:24:100%:99:3.101E-14:0:0:0:0:25 1/1:42:40:20:20:40:100%:99:9.3017E-24:0:0:0:0:40 1/1:42:16:8:8:16:100%:87:1.6637E-9:0:0:0:0:16 1/1:43:29:17:12:29:100%:99:3.3259E-17:0:0:0:0:29 1/1:40:39:21:18:39:100%:99:3.6742E-23:0:0:0:0:39 1/1:41:37:18:19:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:41:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:33 1/1:43:30:11:19:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:38:23:11:12:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:41:40:24:16:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:47:27:20:48:97.92%:99:7.6145E-27:36:1:1:0:49 1/1:38:35:21:14:36:97.22%:99:8.3613E-20:36:1:0:1:36 1/1:39:35:18:17:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:39:40:18:22:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:41:26:15:11:26:100%:99:2.0165E-15:0:0:0:0:28 1/1:42:28:11:17:28:100%:99:1.3074E-16:0:0:0:0:33 1/1:39:45:27:18:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:39:32:18:14:32:100%:99:5.4567E-19:0:0:0:0:34 1/1:38:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:31 1/1:40:37:21:16:37:100%:99:5.7269E-22:0:0:0:0:40 1/1:38:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:36 1/1:40:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:42 1/1:40:29:19:10:29:100%:99:3.3259E-17:0:0:0:0:30 1/1:41:30:17:13:30:100%:99:8.4556E-18:0:0:0:0:30 1/1:41:24:9:15:24:100%:99:3.101E-14:0:0:0:0:24 1/1:39:41:17:24:41:100%:99:2.3541E-24:0:0:0:0:41 1/1:40:53:26:27:53:100%:99:1.5943E-31:0:0:0:0:55 1/1:43:40:21:19:40:100%:99:9.3017E-24:0:0:0:0:41 1/1:40:38:18:20:38:100%:99:1.4508E-22:0:0:0:0:39 1/1:41:45:24:21:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:40:26:10:16:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:42:37:20:17:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:43:45:26:19:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:42:26:13:13:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:40:20:9:11:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:43:36:19:17:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:44:39:28:11:39:100%:99:3.6742E-23:0:0:0:0:40 1/1:44:62:29:33:62:100%:99:6.5755E-37:0:0:0:0:62 1/1:42:29:16:13:29:100%:99:3.3259E-17:0:0:0:0:29 MTB_anc 4409769 . G C . PASS AC=124;AF=0.413;AN=300;ANN=C|missense_variant|MODERATE|Rv3921c_Rv3921c|gene4004|transcript|Transcript_gene4004|Coding|1/1|c.301C>G|p.His101Asp|301/1101|301/1101|101/366||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|Essential_domain_in_vitroMTB_anc|||n.4409769G>C||||||,C|custom|MODIFIER|||CUSTOM&additionnal_annotations|cell_wall_and_cell_processes|||n.4409769G>C||||||;HET=0;NC=0;set=variant GT:ABQ:AD:ADF:ADR:DP:FREQ:GQ:PVAL:RBQ:RD:RDF:RDR:SDP 1/1:44:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:46 1/1:49:14:7:7:14:100%:76:2.4927E-8:0:0:0:0:15 0/0:34:1:0:1:52:1.92%:83:5E-1:43:51:24:27:52 1/1:45:27:16:11:27:100%:99:5.1363E-16:0:0:0:0:27 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:21:0%:40:1E0:39:21:12:9:21 1/1:52:40:17:23:40:100%:99:9.3017E-24:0:0:0:0:41 0/0:0:0:0:0:27:0%:52:1E0:42:27:15:12:27 1/1:49:46:26:20:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:51:32:16:16:32:100%:99:5.4567E-19:0:0:0:0:32 0/0:0:0:0:0:46:0%:85:1E0:49:46:19:27:47 1/1:45:42:17:25:42:100%:99:5.9562E-25:0:0:0:0:42 1/1:50:32:13:19:32:100%:99:5.4567E-19:0:0:0:0:32 1/1:43:44:24:20:44:100%:99:3.8097E-26:0:0:0:0:45 0/0:0:0:0:0:19:0%:37:1E0:46:19:14:5:19 0/0:0:0:0:0:29:0%:55:1E0:44:29:16:13:29 1/1:43:25:14:11:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:18:9:9:18:100%:99:1.1019E-10:0:0:0:0:18 0/0:0:0:0:0:18:0%:32:1E0:46:18:12:6:18 0/0:0:0:0:0:15:0%:29:1E0:49:15:5:10:16 0/0:0:0:0:0:23:0%:44:1E0:46:23:8:15:24 1/1:46:49:29:20:49:100%:99:3.925E-29:0:0:0:0:51 1/1:50:25:15:10:25:100%:99:7.9107E-15:0:0:0:0:25 1/1:46:46:24:22:46:100%:99:2.4343E-27:0:0:0:0:48 1/1:46:24:10:14:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:25:0%:48:1E0:48:25:11:14:25 1/1:47:27:15:12:28:96.43%:99:5.1363E-16:0:0:0:0:30 0/0:0:0:0:0:20:0%:36:1E0:50:20:9:11:20 1/1:48:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:23:0%:44:1E0:43:23:8:15:23 1/1:44:36:18:18:36:100%:99:2.2598E-21:0:0:0:0:37 0/0:0:0:0:0:23:0%:44:1E0:47:23:7:16:23 0/0:0:0:0:0:33:0%:63:1E0:49:33:16:17:33 1/1:44:21:12:9:21:100%:99:1.8578E-12:0:0:0:0:21 0/0:60:1:0:1:40:2.5%:62:5E-1:46:39:22:17:40 1/1:45:46:22:24:46:100%:99:2.4343E-27:0:0:0:0:46 1/1:44:35:16:19:35:100%:99:8.9137E-21:0:0:0:0:35 1/1:49:60:34:26:60:100%:99:1.035E-35:0:0:0:0:60 0/0:0:0:0:0:54:0%:99:1E0:46:54:29:25:54 1/1:47:38:14:24:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:60:1:1:0:32:3.12%:48:5E-1:45:31:18:13:32 1/1:46:36:20:16:36:100%:99:2.2598E-21:0:0:0:0:37 1/1:46:22:12:10:22:100%:99:4.7526E-13:0:0:0:0:23 1/1:44:31:16:15:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:22:0%:40:1E0:48:22:12:10:22 1/1:46:35:17:18:35:100%:99:8.9137E-21:0:0:0:0:35 0/0:0:0:0:0:24:0%:44:1E0:47:24:14:10:24 1/1:42:27:13:14:27:100%:99:5.1363E-16:0:0:0:0:29 1/1:42:27:17:10:27:100%:99:5.1363E-16:0:0:0:0:27 1/1:46:48:27:21:48:100%:99:1.554E-28:0:0:0:0:48 1/1:49:23:14:9:23:100%:99:1.2146E-13:0:0:0:0:23 0/0:38:1:0:1:44:2.27%:69:5E-1:43:43:20:23:44 1/1:45:26:12:14:26:100%:99:2.0165E-15:0:0:0:0:26 1/1:47:34:19:15:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:46:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:43:27:15:12:27:100%:99:5.1363E-16:0:0:0:0:28 1/1:45:37:12:25:37:100%:99:5.7269E-22:0:0:0:0:37 0/0:0:0:0:0:25:0%:48:1E0:48:25:6:19:25 1/1:42:28:10:18:28:100%:99:1.3074E-16:0:0:0:0:30 1/1:48:43:27:16:43:100%:99:1.5066E-25:0:0:0:0:43 0/0:0:0:0:0:15:0%:29:1E0:50:15:5:10:16 1/1:42:37:17:20:37:100%:99:5.7269E-22:0:0:0:0:37 1/1:45:38:21:17:38:100%:99:1.4508E-22:0:0:0:0:38 0/0:0:0:0:0:28:0%:51:1E0:44:28:13:15:28 0/0:34:1:0:1:25:4%:38:5E-1:48:24:10:14:25 0/0:0:0:0:0:52:0%:96:1E0:47:52:39:13:53 0/0:0:0:0:0:31:0%:59:1E0:48:31:19:12:31 0/0:0:0:0:0:32:0%:59:1E0:49:32:17:15:32 1/1:52:20:11:9:20:100%:99:7.2544E-12:0:0:0:0:20 1/1:44:24:11:13:24:100%:99:3.101E-14:0:0:0:0:24 1/1:49:35:21:14:35:100%:99:8.9137E-21:0:0:0:0:36 0/0:0:0:0:0:41:0%:78:1E0:53:41:17:24:41 1/1:45:22:14:8:22:100%:99:4.7526E-13:0:0:0:0:22 0/0:0:0:0:0:33:0%:63:1E0:48:33:14:19:33 0/0:0:0:0:0:36:0%:66:1E0:44:36:15:21:38 1/1:45:23:10:13:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:46:31:14:17:31:100%:99:2.1486E-18:0:0:0:0:32 1/1:46:44:23:21:44:100%:99:3.8097E-26:0:0:0:0:44 0/0:0:0:0:0:15:0%:29:1E0:41:15:6:9:15 1/1:46:34:15:19:34:100%:99:3.5146E-20:0:0:0:0:34 1/1:41:24:15:9:24:100%:99:3.101E-14:0:0:0:0:24 0/0:0:0:0:0:37:0%:70:1E0:44:37:18:19:37 1/1:42:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:34:0%:62:1E0:48:34:20:14:34 0/0:0:0:0:0:32:0%:59:1E0:43:32:22:10:32 0/0:0:0:0:0:27:0%:52:1E0:42:27:14:13:27 0/0:0:0:0:0:28:0%:51:1E0:41:28:12:16:28 1/1:46:29:15:14:29:100%:99:3.3259E-17:0:0:0:0:29 0/0:0:0:0:0:26:0%:47:1E0:49:26:15:11:26 1/1:43:31:13:18:31:100%:99:2.1486E-18:0:0:0:0:31 0/0:0:0:0:0:30:0%:55:1E0:48:30:16:14:30 1/1:50:23:9:14:23:100%:99:1.2146E-13:0:0:0:0:23 1/1:42:45:23:22:45:100%:99:9.6314E-27:0:0:0:0:45 1/1:45:31:18:13:31:100%:99:2.1486E-18:0:0:0:0:31 1/1:42:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:45:32:18:14:33:96.97%:99:4.7095E-18:38:1:0:1:33 0/0:0:0:0:0:22:0%:40:1E0:41:22:10:12:24 0/0:0:0:0:0:33:0%:63:1E0:41:33:18:15:34 0/0:0:0:0:0:46:0%:85:1E0:45:46:24:22:46 0/0:0:0:0:0:42:0%:77:1E0:44:42:22:20:42 0/0:0:0:0:0:36:0%:66:1E0:45:36:18:18:36 0/0:0:0:0:0:40:0%:74:1E0:42:40:22:18:40 0/0:0:0:0:0:30:0%:55:1E0:45:30:13:17:30 0/0:0:0:0:0:39:0%:74:1E0:43:39:23:16:41 0/0:0:0:0:0:24:0%:44:1E0:44:24:12:12:24 0/0:0:0:0:0:32:0%:59:1E0:46:32:16:16:32 0/0:0:0:0:0:30:0%:55:1E0:44:30:13:17:31 0/0:60:1:0:1:38:2.63%:58:5E-1:47:37:20:17:38 0/0:0:0:0:0:45:0%:85:1E0:45:45:19:26:45 0/0:0:0:0:0:37:0%:70:1E0:43:37:15:22:37 0/0:0:0:0:0:38:0%:70:1E0:44:38:25:13:38 0/0:0:0:0:0:35:0%:67:1E0:42:35:13:22:35 0/0:0:0:0:0:33:0%:63:1E0:40:33:14:19:36 0/0:0:0:0:0:38:0%:70:1E0:45:38:22:16:38 0/0:0:0:0:0:33:0%:63:1E0:41:33:15:18:34 0/0:0:0:0:0:51:0%:97:1E0:44:51:20:31:53 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:41 0/0:0:0:0:0:32:0%:59:1E0:45:32:17:15:32 0/0:0:0:0:0:40:0%:74:1E0:44:40:24:16:40 0/0:0:0:0:0:62:0%:99:1E0:41:62:34:28:64 0/0:0:0:0:0:54:0%:99:1E0:45:54:24:30:54 0/0:0:0:0:0:31:0%:59:1E0:46:31:14:17:31 0/0:0:0:0:0:27:0%:52:1E0:41:27:11:16:28 0/0:0:0:0:0:55:0%:99:1E0:40:55:23:32:56 0/0:0:0:0:0:41:0%:78:1E0:40:41:15:26:42 0/0:0:0:0:0:55:0%:99:1E0:41:55:33:22:56 0/0:0:0:0:0:39:0%:74:1E0:39:39:16:23:43 0/0:0:0:0:0:50:0%:92:1E0:42:50:28:22:51 0/0:0:0:0:0:46:0%:85:1E0:41:46:23:23:47 0/0:0:0:0:0:50:0%:92:1E0:41:50:21:29:50 0/0:0:0:0:0:34:0%:62:1E0:42:34:15:19:35 0/0:0:0:0:0:41:0%:78:1E0:42:41:17:24:42 0/0:0:0:0:0:36:0%:66:1E0:42:36:17:19:37 0/0:0:0:0:0:53:0%:99:1E0:39:53:25:28:55 0/0:0:0:0:0:28:0%:51:1E0:41:28:16:12:28 0/0:0:0:0:0:54:0%:99:1E0:40:54:38:16:54 1/1:40:50:24:26:50:100%:99:9.9117E-30:0:0:0:0:51 1/1:44:44:20:24:44:100%:99:3.8097E-26:0:0:0:0:47 1/1:42:47:24:23:47:100%:99:6.1512E-28:0:0:0:0:47 0/0:0:0:0:0:39:0%:74:1E0:41:39:18:21:40 0/0:0:0:0:0:37:0%:70:1E0:44:37:19:18:37 0/0:0:0:0:0:26:0%:47:1E0:48:26:11:15:26 0/0:0:0:0:0:33:0%:63:1E0:42:33:21:12:34 0/0:0:0:0:0:44:0%:81:1E0:46:44:23:21:44 0/0:60:1:1:0:47:2.13%:77:5E-1:43:46:20:26:47 0/0:0:0:0:0:12:0%:21:1E0:50:12:8:4:13 0/0:0:0:0:0:30:0%:55:1E0:43:30:14:16:30 0/0:0:0:0:0:42:0%:77:1E0:45:42:23:19:43 1/1:46:49:25:24:49:100%:99:3.925E-29:0:0:0:0:49 1/1:43:47:23:24:47:100%:99:6.1512E-28:0:0:0:0:47 augur-24.2.2/tests/data/tb_lee_2015.vcf.gz000066400000000000000000130124401456376326500200450ustar00rootroot00000000000000BC0}o7ٿBhvXg_/Mv[\,;%$'%ϙIq(*n[y$sx^ɴ/_>!ߟ><'m9=].˗'f9Y'wo&ӧx܍oփr`YoWz4Y ļ?ܪW%ɼZJ4 H`<̗%~Q/xn|v_6ʁt<Ŧ]=^c<$/l]ޗޠ>}9x:Y?YY}GSmXCi9 nj@#ӵWLf|y[.j]n,et'|/oyKU`5,ԯJه,fR4h ~A?49APy_ZͿӧd52&p`iq:}5~xx*ٌ>>&.g~_\ԯNVr}=ѓ[k/_om]h*ףˇw^ћ7헋2kQ+BTn&?Yui`^[LW=xX׶Zϗ!8g'ͥUYVVȉ&!8㯗<#ӇDŇӫl5~Xʽ}i[9ZGwKM `*nHIezٙ|=^[z>C auMz'XaS0-oGI7YUe4C-RI?L֣yi病n8ҌxZ;r2_i_7URY[MVz 1İ7ŵ^ƣymAkGY.:~0=~(G ḶF]w=G )3_G7zC4G/7m4naMfO U7&zlT5$|0|!_^7w_zT73f&f=:z-)o!}_X u8fX3W_(17dZ|y/N&7#Y՛i\jX^r1812/(o'@Q J9חՎlȁL /\\}aRtƚ!ftUwC҅'}l|8Q>HËt~o>;PbEWa]\K@&|5\jR!POP{9HЩHUꫢ*Rh_*}U U_T}RH 󬯊Bv󾐝/d}!; y_,d YȢ/} GE_ 2 2 2 2 2Bʬ'dˬ'dˬ'dˬ'dˬ/dMB6 ٤/dMB6 ٤/dMB6 ٴ/dӾMB6 ٴ/dӾMB6 ٴ/d$ /@$ /@"/@$ }-kE_M#D_8}HED_Mle_Ȗ}RH ɾlG/ۑv$I 2BɾP/#%2BɾP/#%2BɾP/#%2BɾP/#%2Bɼ/de͒}Yd_,ٗ5Ke͒}Yd_,ٗ5Ke͒}YT_,՗5KeR}YT_,՗5KeR}YT_,՗5KeR}YT_,՗5KeQ}3T_ ՗9CeP}3T_ "}Txq%afA@)xcˇ_>>r2ч h<=<oK&;p,?nL߷xOmX Y/L˧C1VFЕ]ʮ@d"g~a\系oGNwGUd0^|ҫ=2J6oT ixJ/Ctq:nh[e9?&^K,7Gou@.+;m>-n|[=5ϤĶ3ogxYx2z<5SL3vg3 Ln_>,>^rta[}~:+e92-[r<>^MU_7 őQ}sZ>O_Gu#^ǣ<|wy_ԏ E2U,LpO^kaͻcrc 4sWabPi2_POVupp2&VGѺYꕉ1fA_` 핷J\4iVSdyQ΀:Nfez~s8mbg?~Lo )ۂp W X 4lb+I!Y^T(4s5[?*`o6dfe؃Hõ|L@*Kɪ?ˇAib绣#ӽVL?~|3`^2ŪOXx>&훹f09UK$5"5kfcEuxgf<wo_w ͬ^ ^e~/^CH~HPG?u+|] _3Zr%Zr%Zr%Zr| | | | le ?8~#`-k!X ZB`-kX Z(BPb-kX Zu3| _g:α_:9/|A`'Y E`-k%AA _G(JD(JD(JD(JD(JD(JD(JD(JD(kADJDDDJDDDJDDDJDDDJDBD*DBD*DBD*DBD*DBD*DBD*DBD*DB)B)B)B*~ ";/ѝxH }Fa?:;̆~tq2qqx#9Gg|~v6>]~β<=ْ9>}|34=xhyϳ|=?L=?aIy֍x|EsLL.tC)~ۮknŴՁj HA!3 'M9 Ϧ>^+=Ba~0#t; L]R%A^o0f]Xg:('r=:>TSP؁Hض~FLa07Pn#̻\Co("kY9f܊a@𬡠2VL@1eF#"3a&arYj,& T@1]it̺?KjK`XNgANTVק 0C1x ѫڥi{DG=;RQhwC82 NӢa; ,gMe?x3{@\C% 0L %pb!\7ȆS] ŶB:cțY6NFœP[2@h8A4"f L/" )ʣzNc2` ޼0p|:Gc\5$P fQXeuedd i/%X~6\Ĉ ҍfTE'}+4헃+eLV#wG>Or6/bҮ'RBGD$1EOw6١\Qr_6ZI~FQ![m9/1ԐH.xEDž}<";7S(PSzm̖8%j^d p9 *E55 NnqȀ`|UCnZ L$ǖ 2ʽfD?+3I_ΟwKTI3Tm65wo>%n 2ܐdP/sfTͨ `hሂյ& P`x Z4G 8 Ye٥@9M>A*O ܂wv,$<+<]F BFrH 2Ű(=c.<Α<7^E`7,/Ѯ r `lP._GJmr" (vPH@㾀gσXr<n9 ; peps(Zb_CAyR+sU+jU ۠;b.[[ʩ`),@7לVf9yR#n4>Z%7:5=s٪|ysrky=xF0  ~# eŵm$U W/gѲg-2/o=_xLwq]N{+W`A}ĶoqKC[54jfC"q<@.߲o A2(dQ,`@Sw=qj|͓]D !,E@u!Cȥ|!R7w97j=_(6DZ-:-.>AA5^$nQE%8ڻ :˷:P,+r p|NpQ'B<;v5^U9"T6X,QX,L@4DkKPfggf{`Nٻ+Bcl@h-͆@"5^2)}ju9b 2PxwnZ#5 ZTm\P-.Z۔gCFE+N4ܔC%E |nͲ՟\\l U^Kyգ(7qo0H["jG<:8 XLyD e(,fAg<_K8lpB9SQ)zR˦ ZN5-lθ3|NgpP዁Q73ꇃ:"W%n/T9GMAYDg@ 40f  6.`a #P|7D_!bTHG*"2LXK4(y QAHj&d'wWL\!=}2042ǪSt%U(;y A>&a&l>{z?07~{M$aA c2X ߔDg>Y׽W7Ɗo3©2 Ɛ߮")&+1mf8W!ǒ) 9$mi/Q,bA!Z|AY:y9L -\/X anA* rh@˥JO<箔#@GZgou0\Esj-A2bĴv.oEGL(&OxQd3#-!D>.3q0y4.:@0 i`id9a AazVZJ[ܚ$A4֘)EFk֩ }NT 8Ou)ĿL` NC)$C_( D,&OX>f @#rUoeO"v"e;F19m' ;\S4iGjR324ҖzmeS/E~]b*W J[-d 5q.ئ' fe" {U> ӣvkr'L*y٬`!x^c:qXn@\dil7.Ni#a&5iaʷޜp{ͤ↧CfJ)[AZEhhS[A䠐C:/p#+\[9I:F/U!~C7\PXT>^QbA9:% Mh:%BR;5\dyhj)lGdi~MTF@0ЯeI@DQUC0:wdR(FF)EP=^e(lډIеS`%PeMŽ;]j6Zk8J9*E+b) f*V;Uvw ǑkpC=t#L9o+j}7,l N9w^:T-jWpOcSVJ4ykw3lkshN͉Ԝ:ۤ)D)C~cy{o2r&"i;x7"wVʠbυn$.dU6pbv(|FE IG|7C=OdAX\:EamQX%,(Z!#fЬ]9"H!tGM&żYDH텼ihRŠTð9W!V4-h$SM<9aS.I;2,Va)2IᇒecК!dq=!.3u`[݄jC4-vdSר=0qEiRFnG o+'+j~F&f s;cb=<(QaXBJ(ͻ=A0]J 7?%l-j[l[; $<$bMR( /? ?2Y٩e`y r+"]nAƤ-5JV2@ڪxѬ 1btA2+qŔTw: ր`A7ρTf]"3eE]rQhO/C=n7 m!7hT}.]ft9pK0Y(5I(Kј-5G(m!F @0;˶:"}Jؒӿʡ>I̤Mu>kFi{—lEqbӢv@CLeJ 1Ena-o3_\{:dҔyfCƮ*rR~PX^n.Q%xs9 UXmϛ/(eRx΀b.)(:d"pM(c(ov(h{˴Bw~񮬧d >5sՏpL;/ %@ e ܖWIܸ!Q2qW!0 T3:TuuFl+ɮК;x}乹9V.&YpUi,'&ԜG }4[&gݛa_:t'[:ƮR֍NWPX1X/* LC'Pb&w*uOڦ+(`B5E51@:c] Ƞ"pP Mfb5--]L:r bwD>9*Q.4fq@VP$} K./ n֩p5.qlM2H9ZP'p $#גX QM$뾷eFnW#7I=pu&J'=-Ozr36+DQ} ~2è5BNcC!P\ lTIAI&Ok6}gbK+JZi$r7uYB[#~[@0Q{BԀ0&BYgL3KqБ-]dJuTy$F%هR´ {hKrБ%L*nodMMk}xCȲy) cANowP}RY)tHh€[TunYG^̨`νv] 꺰 <6wNr[.X́] mb8r;is#v"ivZ,Av]Ξ#$FMu-{<`Esfn@ɧ@Ƿ[T 67 E-F[yGzYa[Wiq>OqS9~nhJA}qEzS!ͪRBPh{3mD`ϫ'RUV%F@xEUsrtݍgj=zMisླ`X0 #"`Q%2+jX!K=& hE7-a EŽPԧKsGE?B1k^vEm{-,;sypmqT>'t++utb9r˔"[WT7b}L9yP64jSr6B]FD?P.P$淒)KJF4jȅۨ[} "T /H$ʠxg*RgaE9:k{JRyRl;tԹr#Tj n42 1N}" p m _"t}ȇQCԱ2Mp@Eփt^IQn;uj:jd~!/jup@-Gy/9f1p Ssu]ß}k쬪[Tr2E[mu6ّY߬`F/XG1[R?KJBC-}Y3}ؗr=Q;zqE7E9H9=yU|rK'B/|7w7>>~W_^zoW/BǟoǏ7^}~={ݻSxWNWycSeoytx|׿<||6?yoO?}{͛4w?䫇?ޥ޽w<\ߧ?߿77=|;}?w|n^79^Z/>Sq_u/o>&˯^^/_|,pɋW~8/~?v~~'MZLl6e׉N/ҵ]{MO됇RFs: ʷ^gQp̠n:*5nm}.! սPpeY] a, ]m6_mK]/%,K{}Og@FG6]+q|ՈWO)kt &icTδXOh%ǑVP"˰i;ӸPi/]g Ӈ  2I+!iV²J{6Kk[p_70nyOk:~Y DQeA d?ż28]!Ab7d N( 6}rWo f{uЂ"O9' d6*sH/`_<]d.2yĞ4S%5 PWي] Uoci'8E=[J?nX7z(]kcz奋I~(f89=##ix?;Y?'$3/I p&2^rk@Sq~::ڨ. O ]qԮٜ͋:Z@\ :|A# 9>qS qa\K|!/v#*'~FbOo%κL&bdZ &#viVҬ$E[Y*].w3CgkC&o&0-l܄zC\YdP"gˇbyt\6O(]fwA)\ ƕ@d]$YY)nҕZvhmKǶ`!ʯ^:bGYQmfd8Hܷ><-W wX2VZkJPZ_HzŮW4v#ֳ"5z2Z1,ܰ]֐nJ4Jhp-b=]\i/KVJf0ߴ@g1t0p}HGA i)ʸ> <̢%],R,W}ìԇkvt6x[b-Yp ᆕf DM9ԧS\f~`-̸rwV^AVm~hs*ǭȗtZXQۦ _:A:-ƚ|Vkߕ{kz&$DNOu9Ky yw}CL0t|I~?+)w?Cs~?)1=/՗33x9/yu~ԧ%ld,-B"]u_diC_vuvZ?I!#f/%;x_'JЄ ֿ7&о ),'2A) /jy9q8ޜU텒o[IyȔ&}/Zi kd0hQ,18{Nڭ'{`AmBb7_趦X\UTʀ )?,k*ˎmk*xgл+>-R{%9=O&joTw.$I-h y@S˔+e|ܷ B˺e0 K|3et@y )/'4X t\BzҢC||*f{%Tfƒn ^aN5OY/̬ei-xJ`pP(m@C҅NHO"MZ)VNL 0W2:0`^6OusV'>FԍhB6} Ib?n\)sm֤ܲrh-hd09b2W vهftUmhO0<aJ R!X҅숙 &9 וvYBTY9&7ha*aXYL7Ki a' *xbYyN ?c"sU 1C<9-M/@rU +ap-\ GuP "fí)G*˰x $oȢ.EECT{XLr8m4E>%.$i%,p@4V={n2[ǛRij,s,崌Qa.kVLׁ`pq-ϞJ^LZypnVzsd>(~[Y?15w_߾yݵ7>s?ϖ:OK{ri)`w>t;>ӒWkM`=L&ZÞ&Y3+w ţz!hd60'b `7dҠ8n=q3$FM2Mu zРSg7DyӇRC%vnBԭ@`_8߮&8a͵}nrRkix:԰iȂCb*"Slo ;} fh >km l4)AMVaj&5M$kjg j+< yN:XZ-݈󻶵9O5BkhJ%`<6ů((P&US--m]5G$곂2\3_ \1)(I/fgodO:37O&)o%ϫ4T\ 5h5K D_CqWW VbCy^v'"܍ȶ=}|!{uyo5y|, ]ɋ0AEr4J#& ٕޫ +%Z+9ldh;LkE K\bp0Kt9l sP(Kg.--N0X*D\m\׎ h¬CwSy+7wrYdbL|aٟ'=mWZ֝)`[u@tn@s&sGיRVSv*q^rOEDVsba]LAmvd֮NM#5%mJsV#3iS0Axylnk*e lAOq+ ! ntu3{TK$I6T8xGpt$G[rhWv K B6u"b)-+g1԰6YhSlo.ЎM칹|WZ&t/Dr-$֖wģaʁf/¼̺5ij_@̬fVئg7zR`mU Xڬ"fkn*5U tYr0WJQ@VVNUM^9zfRMVmNn.f|x*S -3ATk(FH^ R#:yȩCxsDR rØB˳P[e>e~Y[2`˽tp #"LQ"ycuUigHc9oiW[?x/4ӈm]_U+.?'T*O>V+UǂS[9Bsj.%EYI+?D`9;ɩWǰ4Eb1`w.s>m**pab0k*20~#bcDG!`m)Q\&!J=f*tΌ]K}"N~\ [|cfR%ӟZkz"Xě4w2&K&]d- '9ݏ*S1ѐ,8L+DKJQ/<*|Jur^IMmp̌:,HlZkT9rt8ڲ(vTlm53dVp5r)342-@+8Nl62rm>xw]߮w5_~_߾ys7oO_=<U\ BcVq*'vcаƝƉbt Ar2-jCH7xIlL/,-/VnŤLD<r/ZW9q E-f^)FIea7"Ԕq%ŃϡU j"E6P!pR]B^G i%YB d"V ">JȌ#-kGM%P.Oڴ/Lgh7_:7-&Rj;cr]*n^A).zǜrfx` 4H4TUu,ȳZ" df6ژwI^[ISA\3rjD;e2ؒ6$aY9x4~/!GnIDkb -"joϡж"٦v#j#n sx mUض(z._[UR%T~kg! [%z26۪٘mߖa`Պ _k=ХUN|Nu*vPk>l\hΪ,Z򩄁 ?9QʨAWMϿ s[hǠd+=OBiLp` e+#:JIܭkA5Eu*^бm>DAÙʤG1Xy4T)DlŹ0[cAz8ؼ %T8\|)rԮJC$Ӹm2pUC@:l%/ WΔ>1zhq|ZcU5ӹ:9\Fb9hOվ9Ì!팚fFSC=عU2JVU$,swna#ڰ&G^MqA.{@HYf!iq0cۣi L'kJMR;dQn-l\ۻ} ifff=K6>٬o~IRo=<=!ӏ*>9/qEo= sJUaLj\pgFБyB: ͚ž) kJ|w.<ȸBJ³X^oGύvRSUbS3t WSy-,, D m7OivNr3үnT߂{AM"IhM;6pOaky@Mк: 2V{*RkܲNL 3Oix^Ρ )*Y }fq@VRZuE;TJ}Vgji:TEHm梶*Bjd[hݵ36牐aih"Y\: '}̓I ;3ǎq 61T#.SWޑ'Ȁ('ffƭ >+?'αTr{39f0lp†;VIOfLO BH P@g>@ܹbPX[);B=A{p$+B19\+ ̖>H66'03ܲy`&b6uz!;z af!0<0^X0۔[w1[ɽGwF~aP "+054FMz\\C:rL=Ε;o )-]8LYֈ[~~~K- sfl,%AbJtF.\ǸƠӹ^ /ukq帘1F'Sмr3$ 0'+/\.Lt=ٖ 9O Bn(ar.6()(nfMHTkXb0UmߘI[PwqVUӭO+ | l;#+Z^ȳObOX4@0+:jATr' {2"DK&aEdL^Un1 M&U֦9BDW%f Xdfasc* uߴD'i/R6r~r~6I9fp6ɼoo?͛.o>Utvd+L=?)Dz~{ooo?7wo!|]YΫ͕Ih1;˝zyr1!(',`Zs0 dC>v-+@Fч44BƔ AjvrߎX,Xm3Ѿ|*0 nɯ?HU<2-(16# i>Tb!s$$ћ{$wdV/ GLB6Uz2sE`9h?̢ {Qymt vFU!29:Wd0&gyô(6F'A6S`,5끍Tall\ti)@.Ofc)r/UEΎvyA )Kdd׆\|xiǢ\HK XIoX;:mA)9l WN:@lax[glj- T,qo +41:iv萉&%i &^Cs+~El׶Kz/焷j)ds/2WuSSKR9vD,b8ԋ ,SA=hg^fHSA$ /zwOۋg䜿Bh0 vC9~۽Q*~Ըi]*usiL]ϓ% ۏֆCã[̶.st84\Ѓ):pn8>hʳ܉5ُ3.sQ|R;9,R?^/4q4p?o?Ň幤x{E`.M#Zo$J0XW/XzX'o7 퀨l @z ,WyMYhYh7Ab uςS-24]cN.]/ig"퍍(Q.ڱ')"At;9dV YY5K5V.K0Nd;_۠'79>Ȣ(8v;7MXkŒfg'\44-rsUJc`MP9]}Juv\ESkJpXۣ+iuI\8;YfOed{%M=v襇_VNj +.9ROBH~2δR?n v m7nSLɯ t5nNO2qBC3}kEjWz9T3{R1$n~,@K`R͈KduUV}u*3OD\/?cVϗkNpsxUYkuK/]k sj>i.gea˟u~?-ge:=^,-g_~eu)y|cc kq?Z;\_Fu~>s^۷7uuPsgj?u>}ɟ8XKp_"<}/a|{ K2[оb-^>Pmu\7lLp3Y^h02g/K?Wo^_iU\=n}l7}.W>yݻ7^՛_~oon?7/mYT|ݛ;?zoۏ//͏#7/>}r+www)g)#<ϻo7ϟ|w߿ͫ߼} >{|>oyueoW\p'}r_zݻw?W>ׇlz~}_=?7|~wrfpϯ^^7?o?_{~,>* LKY-r%L侳I/(4d13><05~8RbU?̴޹A:]uuT@LQWJ-KBd CAi ъPt!uOE;EXhQ{rP/ Oض lQv"@:x}_HW٥ oC]\Y$_7#I2n>(x>qIz)|) AMkؙOwȶRxG$.Z# oa Pﯕ6)m =Gq;Toa7'PGNL#Yhs3 =`h4ka8r!&ߧscl0Q@ h n$pF6Q(q?4f(#Mk;|ӜW&9չKR4DFC} QtY4 ԟj"[()0:MޥFE=S_(=e, BT-x$"Ϙk?;ԑ2HM JS+9`V᥀7 +\] y}[dy%aGiQ#$SH F*_CvbܔQ DK9Fh_G)W%k+٤ob W5"^.^ !H-FG/ʩt_ ']'Co䃅s)f֎,\̿Qgs$/ҥHT:fw-P,k'hXw oR(J疈mO@CL] N4d@#<.ďPGϦd-N$T􍒯||4vM#!M6B Hbޙx*`rJEBHhmjGCn̫;hA;Mf'EiG,X P]28I No ˱@ JP)#L'kH "J<]oq%4Cp(ZRMf6Ia0 (^n+@٥u ((Dұ8:?eY:OrJ dо)b$h5WPV=]GbCN"sM:Zw]rż>v]g-%^+6Z柋ʹdܒjj@Ť9)Hr(u~⦻dW:t5E8$e]m{8ѢvdiD#/0eR秵Iru{姕rYl[~:D{ɳ_/?=hyxr~'an?yQ[?}p璜ƴ,q0:0M 3bDQꊘpzY#54DHV~avи#vB]blRە㮀U2/\H]>r2h;ycLF,=B]kjw6Fix< E^xҊ 0!R{nGP!rẂe1p\Bi'(1ڕ-ܛpxv]nrhoŸKxH|ifho23y;9#MvpV-RSU3o'zO4^(<[˷iJ gSKNL{@dU &+ۈSYc֬ ж~ȸ^ǁ)ͼsS[4nݎxӎn%mpgKu ;B$-&e0H.sUq XO^Qՠ]54%䩞hL W8o E߅✫3CtJq8uh!Ai7ؙu!`SB @NjDdΜ}2Ъ]{HOc/`x Q^]n>r4fÏ2S23 ,rC:Sff;O?kݟtxDc,Ղ$E? SuΎ(Xm⢼CPPlg!% TW2‰l#5՚Re F(+вV=t*~g:k`DS8SB #P\cQԠoWZ'8 B)MkJDO͹he[ eTr~Kk{#r6K!_YvI/11T #2otK(ǢtHjS%_ =4,,rJQIItdH,~_0,4(bPrSH N+Λz*@)<LM=Wt.7 3 e[uwb2]Г6% ؐrpT/̩8^lfɠ)&mDy $J] ]: %+2-ANCS"S0{׳#9$i}T]]ʠ-Ggv%}ʥ04Ѭְ,"M̩&"ݽGav)1Fi)O)=2oboTi&뚄ښ"3C՜?zBWY:H1t-:JXRi-b]bRL- vмYU9G7)66oG7$=1>K$%K bsa"n#hH"hM|IbR[tƑ孳{uz1ՐyŌo!ݛ/~a?)w^?P"[/j)5_Ū_X47 6l/XSMF(DO!#Z(0ϬW С[^8FJIX`UANHs)*|pvֵ#\B[v5XF- '(9ʺgXDCY]7"k:!C@8l 4̬wϠX_ް+'r4+W7[M<)EHw^ NE/!R"H~r 8YKp̮]E&=4>ZM8?i_j9]ː܄85|hQ3> {rMC]qIa^-~~ua1h`褴zVP\xqUJQLU)Nn#><=9^}n#Xw[ jSeF8l_>ǖru؋P5o0Hr¦byo\PeP`*=MHka0.f)S$&\rY5P0YZmGa`Kv lx "G=Mʙ3U$(/DB]c87ϣE#ZG*A^yZx J_&"#BIݒIZx7uˠKks|&} ҩ]emىzmCC@Da4?Y;[Oh4zbn5Մw)6 񹞵i[l " L 8TϥD21nU j7HDg1|HfĔ_,&cEU-0e/+xQ ib'҂ٴ-kDlX% VD4j[c=-oRyh-}eeoTТ *1oޅ`gLĆ"3ebYa(h ~#Gj6*|mZ['ј2`]!W\!u\yͯSYDh&qf&5ivЩq^Gܨ:6~,tC|X4)V[լaɖ*k~0)6o PG܏Сts*]Q6_Y1@f]z:|:;!=uYhMCDPci7/E鈨"ک>'&;gABz9c9e:.FFRy UmY<|kþY_^* F,  <@׈mS13d42 5NfڛCN%8ϞO)]jB?%@2j+Š4$@ִFO D@x*gR2d XbIEL%iz0R4Rg J&wk8$exݜn4`kI-|K g23Y+CCIC3,IoRoKlZ7Zü@sf i莦g]р7òqU -o R"aCG}cGȹY5Z%2/kH.53uUuQ4aQ!{^LId!RFg0/ U|7J]^?h[U dQr&Yʻ q(S9Dl$YF2 )ۀ7"t=3Z';)-TGh5-RHxF!@ҔԤS C l'"*h 5B wMcu`*v 5`d'[JY4šokx]ЙA̢?X^h@O $G\c*~;ZX;ie_kQhdX 9K5JY\ VڡUsJ^ޒv%-TcoU옪,*.v d- zՊ2XXTaRB+Z~|[ YUvU)k]8_Vr]c仆2]*ӯ\ΔU9Z(eq*Fbb6S4"jW,?\lX3[]fu娺!Ü!}4qhqQ|i Zc+!xc1T 뢼} AKĦ+֋ѴKSX"$lY7>^Quhv۶/nUa| icM i0VRN4lU-ޣ736-̆EOqQS/n7-ͬ/b|TUR]jQ fWR^\d$H'Z|GM^0; 1W=˔C? PLq*8JGz߇Zdnyn4 &UxE 99ް#VAWM"onaw"<8MR@SHv"@3XV"֠$Ralbȸ͞ qE_2O߃Ɋ R?6eT6m{"hW7dgql{N7Fv|n=y;-x?@4RI+yld7׺oFkJG$|{ax+ nYlU,">O,Adz3GVā០3%ɬM.ު9PkzgˁQ֤͟lcnRuwtn7eD:J~A-3İ7IcFM~,ӔyLk{H\h] _ftra^jdW*-qvSp!ؒjQ鿩e teZY[>Xhc"8o)Ȫ⼈5}흟{*l@mf(8ӃYI~Lċu= 5KC冀\Λm#MA8nȋ]%\x}ѵK8N!"!&қR$ׄ=SλrejUtն75[a9"dVcd:DxҮ<z@P '5yO}Z%xT&"Щ_\WOmP, w<9QՏ5vw)Uaäb(IǦgKx+)["SR,H6X#-wcAtItRq2lDLֈ^UYUX %tY!)YPD3O؞Ffg` +rge8&EF=fzlQ_] ǨbxzlI:ʴYwkU|e?=Dû7ezy|Ͼ~/>Ko?P7/x5{bu?w}}_nC?mzO^c ôΊӐنNZzRSbE%Vaږh(^b]OixR*ڠeY#ǥʼn(F<9-'&Dn\ %;RPDs[X"lwbrەs%Iy cC pJa1B==f!6WA(j#Y5u % EpM[sU *vmI,@Ԣ?3 Bbta0h6qOmMJ"p)#H<Hy*鈳RЀv߼B1c@V`m[تQ<±)@+[N}^#Wqf2S9 lN}`V, p.ՒްU,<=BmJes/R3U{_UE4}ZKEG adNC8wtXG$n$a\yÙ(f "욜bωnF1{luL`6V7t1x AVLDA+s oj*vq;H.bJi>yE6Zaxür@Z0pBz42(T2 }F(؄lҪ-Z#0a"-f\"IHs&g#LQ+H{rY)UJ>4"4B+i!, uD[4v‰wy:LL3.TT(4|${9rc-4G29#@t0Z@ֲd3^jTI.#,Dcne[!ީ_ڑ;J,QOBЪzeKCFAc1=drrz) 2p:cGz}Bpjݎ^VVW6pP\3::]5T9N](~r7CR1J CwNS5 0Ї7K=h-t݅};iY@,4u۝>!Fz2wqIvu)^ PUD"bcJڴN&IwY:XnY K3X_ߨ-Яny/uO7s}|o~޵_7e=e}=e}, z'^.T>RƆCGK3xJ3Se=Cdm%1V2oyHB ,;Kp,k6!rdgsVdz~%M^I-Ҿ0* P1i 5Lj=7 ɴyƣM6k5ʼn`FZ6o5,uac7A& T$r>d`FZ xn j: g)xZ!uLޑ7G`s|i3gxQlLR*(=4G-դaNE/X7κs 6zw@_ěC5 rB|z LOƀ؅quôflvE]r=OZtZtػ"ȟkj:\:N$B؝֧p Aj(6TXyq;3ÄZlQqP͢DMË L!@,$#"A1[Sw2kK ԓ!cVFlY$dӨ3!͠P\mY[jF39 OYsOMx[u&5sr6]3?L٠T +"nqdDYݞwϚG&w̏Ne}9d:8MZuЖM֛8]0lpƼщOw~,LdVv =+.F.4E}?hc[gl=tFYxXtpl|bR/K|8yGѯ\a)Ctd&(>ik9L6ӖndxbR?Rz,ttm\'R&9+9#XK' 6u+tөG+cga 乄BGgy\KV ;Ex4°Ƒ+B + ת>$̆Np+6jj'֜=^g9lbi^k.ٖnRwtGj춢?ذ٨ţY0̶bNT/>rww-FZ[(ʿ0y &VE=E k$"b:B?ʹ sUXĦv Jr+f 5|+z{5S4ICL Xam[2a+ԡ-N0*t?%J5'ZH܁3IE×dt{#Yeۢs9zgI@܇ MUwP 5(RPGpPm{7a5BQ4ѪaEZʞmͪ;G`W[ aB]*]:GoJ|,%<Kh<ɻ獬ґt96'6+YRi6ҥGDcJZa=;"dI,>ޡN&egKyL0VK<+ .g6^T'͆Č6 M1 ڳ`]/XѝjW4"kn;LTOVq(i6< uvۛ |RMP/7z}%eB~^owiXwj8V rǚCGޠ47hB qo 9?I/_&YNILЏ!cX1(w|ŗd·A~Ъeؑ򌳙2t [(/ YϏ.x42C(XQ#dKX_ >k/0Daǣ{6:֣|_]@qLgO}gj??~g7w?_޼˯ϖOԧ=˿|9/^O2_|o/_"Y.]:)9EF>l*TcY~g:Sl}! #ސ<| ha4\wa@\ @ qU… Es3C7D}_4e(ؤ9%ϳ\! OSZJL9(. H_B5H%T뢭@KE%f׎-<, xZ"CP#;e!Էl@vC,Lv4tn+>hS OI:4XY{6r:t:{d^p` GjH:ᩦeA?IDhHx(UygeG-ө_^LV _ dr t/M*r1= 761ؙLR &iNA#N5ƍP=)20! M`MeЀ,! '(-iL:9$=嶻zHnPnBg뭄 <4kPGW%6FZ1$@}5/h(,hxw 5UȸrYVwI T:Њf F#R&6УyLʀe8=QG+$! ZBY` + vpMeٍ ۴ +{V,X舭湑_V2 ICꇵd裫y ݅ao͸'51f0OiAmq5e7b̍~z6AߥPW$_b:a Gf.$H?M^i+z"> /v1IX4;9YҨx֏ek0 NF0O 8Bw <$pӔ]SL I9VԐ7[1m{dU%CʒM 4u2snaqx;0sj0s!5:j,4~xay#cnŁWfz:jmkp1p=7Z*~ # ʳc"9m4"v{XqLٝ@z dcC&i.nrɡn۞m9ex|'9uv ,$ud !x!>DžVOWunc]JKxr,E1bEI"NF!a]xvbe|S/z{}Ϳ.}8|yј5pwu{Uw?|_~xmh~~~ݻy:/_>/4?8۞E>?~rWoo=\߽}ss{;QQ<So?߽^xu~ש]UH_}vZ)o2pA~G e:٩=t5>BUhșw?ԁ?Vnm1kc )\%)$LBp]X7!햹XHei̅R4~_tW AuZx=/]AR.ntxԃHХ,Tue%ͪ©`UY_NHLX#\ ;)ۦQpr WR_1l81kD%:V8 liS,TaRusB,ʊ#eM %:IL(6ot8LE9h";! f nEdp+;؋FJUC *W4<@9Qu1[AG:ԦD bO!D"z 0*~")&RE65#F 1hU1jAic=D$Ԥ+<L%72ζn;d33|nzTN+5b$ne n[{7IjHbQq6YX.%9i5s  q !A4Ey-sNo砻J)IegUEU&,JpBW-1=ZK|xbk;2Y(0VySD0*MJSB=?M+`fy~)>4G:hI /O*QLBkvK^^ߵۭǥmu>n8 @:[O Mд˧+M Sn鉄P1aSVMA8.ʼnQY `@`D|G9LRD|׸۵%kz>wdiݕHRíًY,Z4$9؅AGbib6uyMM'}'asdx0(}@<4!\}cYFDsFMKQq5ё% Bq(ST]rhڮ6u(mzaP%\.oz߲|?Bݏwo忢ǯD|ރVRqr]>FVֺcW* . i`"in$^ J8Ȝ0 J*՜i!Zc.U!uHv!SEǐ@ٱ!aNY N.ro KZ, :c`0--h;;U?椞 $Ѝ=,|3`4$+b2R8Y^VPT勞ei@ \lK]UӠ?ȴ74fVȗ%)vJ@0ӂ/BU%DBް*̨D[Xby*ami䔴>L6z#Jva'zYlR^7[$Iw)z~\TEUtLe0`|`5*;{xG]:sb.bΌOZp>+[Nbl6 $d15كJ{ϦFHdBUd&(3J˞zB:ʹƢmKxyVryxZ?1 ,F:jNUMadKTbւ;fv4&isB3Jo}K4WRqZBDŽ9ТйUۖ0,kgHU>=,t)>4x$ ]PF3 Q[жC@ܝ)YMGhnQXfE>6+ߪzxjFQc|HWz[4T8R5eF'WZ) ]pι̘IdgJ1nMdDJ[iTߝ^WGإC JBEޔ+!3/FXB&ke@ЯqऔzJlj\GU|xR ]va.Dͮa`\%rkƜGŝ.zmVZ[PTAc}+lώ7](l/QbyC|,AnhpG(Ԭ׶i=- fAݢRԇ{DIzS! Z7 (IB`BL_efM KYټ܎YK:9;`c?w3IKi)C]Y.]撴xL: \מ*9f[U_6 ,13V7E76e,*nVK)rg0\h2aiMja {Qk҇ը4lo -;Hq F*UZfmZ gMVF j48FS#k %]FՖzfcjcoŜ;vKgƣ|-J=S#?=oZҍ˅yTVpr ouڻҁ>{+nW'MK[ *2jEV@-Ui9\fM9NA󋋧 j1__k 0'bn8$[hDp8|M;_|w]t=rpi慍eoQ5lyD(Dxū= aSur]&*b*%nr,yvlե'%~ʽ\V9ňc{59#N)Ԣ5=Z[xze]:XldRiSgj@ ؆ݓ"T+MdXc.h(q}9it"ui˧ |J_扸/ RP3|T8}6i݆i׮Ez)[bD*\5PBRƋS&i(vq+ъ% =nCHv ByL6$F$b ;="M F:J]tφM}D@vH?2WTɭ`+*q/T/P}>qp.^.iOsUUC0AJ5|%6[Ϸ𽹚5 '-;P ڎeJÄ4wC&!1֖epGLŒ2Enm? u|RS6?x8 nYa1*}UdOne0IL] ѰL!zv4d@n 0M4hFd0C]X)Sr:e+v&)e ̣yinV׬$5|4!7CWRJo-m$V? d 9 &VdI*T@n R^YJ,0|c"h q\̸dczW95)F4 C'>Y8Iw?zij6,ku-I3z@ljc>qCV.vO/m5cF9r̲]V2/̲z?rA=16>Q?S3˸1֏x7o.} 0߽{ ?>l H~|5 z^f"~Kou&5[˖AXk,+--nfusպ\[0ؠb=d.Dnvԉ-RtxO)!ZtUc#kku p!vD_C,ByWX[JvԳaaS%:=b5Tca.pܶd9`KyA36A֎HIp/̒#aL~-.6va!09;9d).%M,eڜ\]0fe!ռ\3v%e͟}x#.5 P'3=h8JbrqI[yB>8Qu|)SOKpU2iݧ:0EOUe/fr+VuDž#,(׵ռ F\jqzX, , ؕt1]G{uѦk]WQ$fkV8_~pBj0g<<2{||S'c2HC5h|su =]y)շ:$)( +iI#'N9:v!j{?3R).x2|gFX\^Lۧ +Rʍ^-[쨨2{±^%~eSx}H.:r:E汲:AV%5?Ud+{^{>5Xw$q~lﻲ;NZ=ԏB+뵵<w6\Lfj`I<:}޲볲a'\7PYG<&R@ǡoښ =IS@=DI'DŠceELE[+p~shW8#}9 Jsh:a(Gv,0yŤ2N<,WuFWkPG S&4W#mE˸ɬeY-33aYEX6ԨŔixY&nL@R5J]f2,M4x>}~0RMa:Q Yi`=5%Ȗ 7WNB SZ&[ݜ .F/+[V+f4c, 8  <$[nv]"z6e6'`T^vG+-*Q?[$gkDrv10eD]qʊ0gƩ5vh "wp|)tw?7&Ug`7ޮ.C A>ߋ챿=AjXIIH/pMCݱQ:׌Cf:M¸Q z:TG~ء{7$NLnwEX=$LDs޶PjEW-ja.ȇ G.7yK޳&ez V\#%"Z KLІWo褖K'ɧǵA}~ [_}Go4넸z?gAN l\ @MxI8" sN.e[r1yZ^V7Rd"nEjya 2b2) >&ʩdV g""H!aD 2#$4uOj)K)Z*c7##x >x8Sguv ER:٦( cőSJaޓbsA}{F0Q/=32k1Ka2pyw6pjF)T"Pu\2M>2{&_f! iF ZFG֔yZR#+EZv3^&{Cr#-AґiM /+,,I1App8%?FV0v"|tR(t5u`+m}'dp 0vJӔ*$-1Fְ҄3LG'5~ޠ`|6N]3 T&D^QtA6]8cAPgѤwi7ݢiu%,!a 0V*¹f|qIulWW0њv>R03$"^Uݒv}(jb~l,*lAp/V UKUr58@bf7H5J;oWk2>Ep/pvPu+ X-u8wTpb]I+vA(Dn &a60S5:.u0L`1pdd)x5DpĒNVUO=UE1(:7 eܔ[O0{ū!!wއO3_mt[ OJ5TS^Tӻ`gWOgO_-Wa`(%}swhp}s{~ԟ nGLUÇ`D.~쿰*Hօ+?Ss*5Af<ˉ7D~W񼂥n؊eyz(Z+ `Ξ6CdX*3lB,SM2LjD9OZPfԌ͋eL`Ѧ`U׬: ;Q.GcDjl=#<-cF{*S6b9q~XxT6WzeKG' qT$[M&BCq5}kgb8F%vJF,/"P(9f,V=uN;/]wwwiOkcϿ @.߬:6՛i8tkᏝ|X n]lƛ/$(t: 83ܗ3[]|qxO:j~t-X;kgt): }!,nD?FU"_[e\\dkӸ8jm1u8O:?~RJ,~] ΤtMy>9 8N@~va|jU |?nhbjda2,u@ZY'Æ4~׍q2tcXdzR^o<^3p ,/]p 9(ҌYCȸaCVҰ 8Mc<[ d9=S7ſ|#6xE'_|n?+TW/o>ۿ}zW޾z>*߼|___|Oo>׷~z?h>Ge|aܗ&{q?w?|7>}~W?_޿./^yǏoz|/7~?}͇ՇzO˻Û7JO_|~,7oӣg/|yw|<Ͽ{~)ͭQC=7?AEdڤ _ԆF=:< QA@}L +$1"mras6 ㎯ <݀dSEJ{7GEޒc4x"ub))F`T~Ձ^Hxh,R{øOt]7Ú?*I'}>}hME8Jf8rD7d?k<62"2oeVǚ y:Pz$=G}0s)f2#Y"g͎`FÑjv(fck^C9߀=Cf4c#K|!酭 ݰ1Wl7*t: |Bb ? +,hNy~ bq-3Mh4[pDA)X4vqB NJ%9W[蓬䞣=v',Z޴ǥLjE0c J$H IAمft}3v }=`%wiS1ڙrnBy i1n!gL@Kk6[M-?cpٱ1ح娢-~aoJq$lB.&2ݸB,}G4}}b y^8OFQvYKAVn)aoa:%v)JP2=QCÜ}R藋{q |DSpP6K ?oؐH_yyGvRr{jLwP\8įy$F8ebH2 e\ +WJ8dprhSB2ZZv'E$ ;G4s`CBCɧ,9%dV[@ Jw-3ۣ3 k <{nxJTf7=Ë_oøLQ4iǟՉ7w^Wޡ~k0D/=շ 5j*qt*=摷zFtG6HcCfGhyS{}Vo&43d9&TGX%Y߯i\o M8 m3@53;c/ByޙV}%5j^! fuX{fO! 6.QjC̷pI}*f|L5 OlȢ=_6YtFzώ"nSS~ūtI@Fos⚢| .f!݂- l(`Mj T]>^|Ld2٪}h.6DtM33; l;>ԝ!XH_F:[ QmkڊZ =듼탚M"ZTu:ā0`ّǛ,,np^&ztPAT\$h:#񷝎|Ǒ^]dYh1ptx. Stw?RilsUC.dH[qaRO".q{:ȸaP**Vu/vxm57B( kkF[T%ck-/*wBi_n3>(]vm$⎹p~^_VZWpit֍)3.$ZP%?- ZlEm05hS-#OE6mk:+*hIa`3V)lz(ՈvCBkش-h_¸g˪<{m>) hPK YW%ng^+8y\0p*JEc}a0u$u* oɬA\+qsЎ %w n1PmC5,פU +'T)mWgK[RQKeE)L\@PU ݖa)gA0=E8?{y - 5 >W:qOwߐ|^3³?<).s0Dq94@ (p%\=+53a\b<ouRQj2_PB4.2iCȑ' d;,.pǴoFrĄpe#@o?r&e;^U M8}6"&?dlk. #PXlg"G_GR,fy8S6OD>YRbG# oBxڷ2LW8?LB~}m縫Q\h*E'.XmUHIYq `; [@c$Mt$̃>N[n[nCZJE?ۭ8ޢ4M"[Hwd`Y \L@hpEa-ϸ`EJ@2UHʿvPBV+ŤLt:7g]exo0P%mW*Ja >_.]:aZ޴sfڑ a\9}_QC;.7P!(pLm pM5b_*ZW.>k\g17R\UFqkJe!MR0k .j\-0+fsjU=[%LcZ7MJ90@\x`| pUs?ϕ(ۂR=€,oU>Oe  29Gы@U2F5&{ /z7B|@lS&Ȧs6ڻʞej U)tUnDzpU5tL.s,sZY ?!XgM\}\~h:xPSF4>{o>`}U5TB JSJ/uO`>(o/CL~/?}o}Ҿ=7xz po Yo~<#OxW?/쉆$N+GyROVQ9Lmw߂.XOF`!ƞR2IlR 1,)z0z~Ơ?9e.zu3(ިv͛;5L %ZYe.s=%*KV%)DE"g֬Է-ں;7e!b؎kl*rkk֑^5CXdeouB>CjU榌Tj+ܼ&Dfq*L@")0q9@,\3?c h"e 8.oۦQh<W >#lbDa (/#:{O(pXyUr,,pBȏqxۃup\taMo;OƯ˯#RMtr=5;0Ue ȵ< Y'AOtj>qJDڞS3sxVI]ޅ qې4>":h]Uˇ@4Mn>-뷥${XPCT2Jks7O']o\ɐ"TD<ɍp&aT ̄2R EOJiA֍ TP2."b^. l'6;TWa/2 \ Ko[>!GKK  [ al,ی:~f$c㎈aiR@ZSS66RUASPFi`RWnA(Ooe[bsvPjuXN/ 7|ԜfFu2az}1ڿX7X0du*|Ae1!kf0vO @ s0y.:F֌ }E!%*d Cx9U{ X^g9ݶIR̈ WIQV0ݠK *:RUm졸O$}VW0$U+fׂdT̒hx.r2֥Ob-o=Ė d\nH[{B83*XM2˴RT)QTmM4e=|'Ś)bŊvzpE2`qj7yլ+|(V=>6F(.TTRDZaO+3("L՚wؐ)Nqƺ DvP(x߹gL`9Ut bSiѾv\jXT+{[G\7wu< Z3=SJk0RxI'VU8iR-JGPas:ЈFC~GzŪ'[&kV]$a )/KBXM}=iśǷ TǧG)EGh-S9y N/% -=1n̡2QQRTZ=Ȃc0)'c Q4w? v;BZ91$TEyu)8% ke}XKb1혦mQ!rH~["j[H`Z[ٗcOOțmyrm,ky^1wx})_rL⒯-(xBD<֫ZkR?nlpa [n6䳹>ð0]`f:8s H~Xоգ)B{2eL`B@> U]Ps-Va1>B>x]j'U#Rjڳf")UH \&.p$($JRM]H3;T[Mf_xK%߽Fǫww&8L`)a0BdCKd?yRUQ5W\Z0-Pa5xoK0r z&TH`O'Z΄2"vZNjL.\!Ǎ)CNM]64cvv/lEAR@evSAm`^¾w0}'ƓC:Adk]s<:Ś9lĪqðiW ;8,۟2[Yik^2`@9w2[`M}&7?6VتюQ _m}J+*xx 'ɖȸw0A FX3 &2 (EDxWx$3"I? Ƌ'sؼxTp(,Ep|Qx%- υpB"Yؽor9@d!Krə<~ii: LJ($}3][$0m}BSk7nd/NvQֆC(#}ʛV(}yS2ޕ N+{ufƒ?Igv..p ,qaԺO"f/TV4~]b%܂=m=;ewr$/:iHV{4奕&F Eq)vc!3| ;(jyEOIF =ij uviǎE@ }$G߻bƃEOc(wкP$c\ yzŻH r K>+ȿ]o߼7/%08Lx|?q`+ ^'ck۬(Z7Cz@T>m{ͤ~qlڮ-3/%Mn5ݷK싴-irfS7xmu yiM^w(.y4h粵^|X?2 rEA-ᷫ] [RyQ^ 9Ntk TeU5c6]Jf͜t8콦wȔT呱mk3fY\ E|ݳϊŤ|GBz&`Մ+m z8i)c9VD4Znkڧ]k1֚˥Vļx~Ż)BCʻ[-յ}nbvO=c{Gj) 6W}F5nI0˖cwԕ,ฦƜ7-\8ϓRe!"$Ԥy+ã1w`74^"?ΪüvzM{mnkB#/S` |#lW-r.1;L: ]"웱gmC#U!^IVZ.j<~}F_>m-Amɏazߕleu N*ZW{CW)6^ܐsA_UjyKP0d_i [0HԗK\9 ֨vCJUpOAX%Ж(EQ@T:._$;Uw-*%ͮ5@=h7|UcKP !m[k"BiuA\'i%]5v =rdԑZG&/5SI1B`%˼vXDzufC£,yu<+KnZ@|EIMO{rZ%ⷉ'.']Uj} ?xu[8CȹvD5Y̶7qƗЯ}eO[*˞?P'QLV-V)a ?yyiUuEp Wyu8Ki]r/KP׭f`K״ T4}qjW7.U SF4V<{i犴rd{`~"/ JC"ꡈǷPk^fb" ]_(R/̪w R\d 1ksٳ> >QNV)R|gUN@)wH4,-|U&3qB{K֩ UaVq踰 ,J(֣jU0]`XuU-nY-;1 Y8 2+5mӫL_BZ1!YH$/”R1ݶdӆWyQ%=A*0rLc*:>?)!MK7Z6B?WܞUN?pYcE\Ҿf3>.Ui(^p^m8].ȫ}1\N+IoYtf)G9l4'j;*Bɸ.Ǭ; gySlWB>m۪9d# } 1;v6ߎ U }q"q}m|.%# GV~`^8<\m5=evXR6۴eOܱDQQ7F%--:FRi.} VYH+nP-lgCZ%jM^cc!2\q%$4;AuWLE<ù~,z[!uྗ0#LD9NѦT3c\.hKBH%Tܷ 'R+X׫yҋL}zpI5 qȪBb>U-*cVҚ ayB(dުb'Uq_8QEE**U{|BlUʮP!Tj6T"Y1| h`*>grgw"l:,dq}'Ǐ%ïw''A8r G|A(< MG\xT$ OԮq.궯OJ9 1噫 j{nA֞rM0P7 & vV=:^]@Ro%"'S2iB"PՒx*vA*D/~$Ln1/% zέAt+kK8JMx U=NHEJTL~^ݾ#Ha mzajjw* h#n6zWUr f vaĂNp.(wU{ \S,?=kOSB5y, FGLu/.J;t69S]]5١;\#cR$y:4`o;S}gƫyZ/]9iI[WڙmQ5*1)9\GX(AaGӚ ؼ@'?U4|_Rvܴ2PH'5LRe-J}}-. LBW-8xTfPo̊>po gwwj^V夶'tځIn ,}a% Qaڴ?/7KC( %V,^u-[E7q1 gwF^S&hmBF*c5*"j9>Na΃3s-"$pO^r5fL P1ÛBCN8}YǑ3}H3 8dڀYy$8L@"EV]U%˶HvSK._OK.WzZsz_k"}jxBEW:Ey1<| {8Y k}wt e`tqW:1:S<WMxHWb_GYa.`.^pO#{ZK4ye';hΫA:G%͓=_gp]kӤm0!کB1{›WKVҸ[Fg@X-kdNҙSR,pLS}o8OXO5eyLcY*;"L#DC4o^~`O.O^yxUWB_??鋇Ǐ|?|>=ݻ׿y?7Ӈ>~O_֏~bL0/~wGٳw򯞥?{x?W<>>>}?}޽!Oǯ>~|ӷ^wL^}_^??n||-=ɋׇe7/r}7|m_~$#Tgd?h%r I-_}U7dtL|clhnJ[oo0e6~ѝCD`{9df\o03An0I!ѐ4>9MadF}0v.OZI[ސW o0mHNn3>UrR' uyҸ!P p:e/˺/n5@:B +LcFS/X]ܾ峠A ꈴKUyLj' ;?3s$s|,Yo= Z|k @z'2*+6Tq<;À4f03"M[Yp$=5"G$M~lWAĿu 4*"5]'azDfcD3PGnT7Z&O| .ס-wjF6e 1c i:ܰ\U8SÔ`+߽!XyisprFnn۔v`U8h~H;=Ae% e]L;Ӷ2]Fiܸ")P]Qr1(`DPެQ!S6S34܈ ,cn $d|Oڋ&(Ifؗ΍JBmRF]p`߭f98` #~=4dIQsu40I ">4ۤ=B a6VDhXAeRI"XˇӴ]Kk>trqvkgys+%橶)T롸HکU 5lXO6+ ,%sFAMa˒OB*=Ȓ9 6bLR^Et -r90 aȉ>„j"TH}cMrhiI,Ui"kOQ:i+(h;9As`=sCgNQP̧r#YA#BE/Ǵ@a_Ys[1 SZ̽ŽOqZlԤ=L 'M6{Jbua6c1U'~&`gs&o)8f @[2eugB%~7O߽zj%g<-9|7^~1_ݫo>.xxw2UU؈F̊HoXFRև% a%6B tzIB{1)1 Cx(KwQ$Lx*<88cx`^k1cʐ(3u{W=hߟ.?xǎ~xKV cق$YBQ}Д퍹iHyx^m1îj"* n\Y$P9r_P~u;p~l\Qm䚁\sgi,av`c3VDP7)ut֌4QX)ݘ ^:J770>U3F0A_48@U p6y0g}eWrpVmtpPC m?E(rnm?q#(Yqr&2 lq؈YQv֒n7^Y3?W6#Fx0 yoM,pto˽ aysyiy[a 6ŵ|㻆~o#Zj^(݉O6s\WH'бfkA 8lNj^ zgEݲ%tp.ڂk2't 3*Pºaħ.|-[tݬ뉁IEfa}$BrrCðH]AD7QNޤ},SYy1qB[i̤c`!-XȯnA80J\2rg~ZDS-qWi:KLy/bn-V8C1@a {zgxoۜZl ]?aZMz5 }dDa.ÂW wߐ^JYdli2hV~0.0Wln89UߤW˓e'oGMu_~˯ؿؿؿ+a_1<otoogB.)p:q>i3>Fώ O%DK8ZԀcP gtT;gzk 2Ś <0G5٠38zu k̽>qTHf X W ;%j&EOj.6#cQ65зf;SdmYz`j2c5V!Um.ޗ(hȷsdȱAw4gE ̞75k\P9Kg3fĸk(:JS]6в]êgd a=%$f9F_,%#8MF! JN8$ۢf?5[ 6П˖g5ys1lOj0Jߡ3`w1L첛Mt0suY\k|0Ùh5%4.l> \\o8{)7`d^& Y;A5dzD3l1\ )eub~-&OёN&:yJ`l*ABsT7_h61s%tʱ's [Q:G-i.U q'g:"2v:dxK7>;$D+˗J]h x6oI(I&~QCzN&yŇvC0Ɏ,Pz!& DzJ6Wam12ڒZn*`{Ìn0lH nC: q2hO& ÙH08gLSΦلΦ/60t 7lhad\H'. FdqlMBJ~3TpAn ;ѩX)GN ɇ3&=i !Ԕ}Ȓ95IO)h:ڐCV?$W:d= z:I ]O5;#ٶ a=TWFMKAKN7o̜#/)X*5Z͸{?{m%p+ex3'9L/w~o;^%?_H?s%~@`x]ٝIh\UFf2YNU:龜/WK+ihu#ςKCm/0XL[;ܷ:"EZ 5߱w$hfQ{ОTf8ߪJQqvy@Hdb@Nq/-AU4 ' AZҶhNakIҍ)\d sx,pc)UE[]1hS9G5M]y~ ao)|.jLȔ(zZwSpfŖse9w*MOVa8kV+b)2&҂[NQFox9{VkY^lڄt9z8Mё qIVђz$M gjUut.]xƆ3jUυ4(lp3*0g]`swU?4yPgI)L;I#-sj^y}@M{I* 7L;9,Mj:zK)<0mjOb*Y ʠ&'5۲!TVsσqdgMP<4u.b֩e96go-|.S=vm:٠+}k,9Ld#{:ob.JrYy XbduTۧNb^]&l{{ zē&$ qJLlhgDNy<,}r!oem39?}3n$l4DNof2꨾zOzNJfmܽm>!Is$tP6RLaUYjHy:-fsH\lWD\ʹ߸2Vu\MӼVpNolrYּUuEO'G 1gUE6$k1Ѭ}rHp~Ë/|e >_zot7FLGCٹq߼{oթ;8?~˃??q!)wǾ_ B'O 5k~RRlO!eAzKĜ hO% 6jU'Y7$ĵLd^FM~I+*#tI)Fr1NS =~ w_|-d[<,hTsY$qV 'ᔙi6yD)+/#sGMZDuLpK9)^JZ\.KINRKN8Ϣm\nߔE s#ʉ)u|T%\9u 3h8 W0qZէ̶\E#j. #☉*K0 BfS)6{!FH$bا*f( 9t6 "G@ !• ))i>K݅˂M?<֩ B//K ^@ٱOylmSGs2|M-o;UCŊ{Nf&[2L2|muyfi\= rZlj9BPae[ʠ4AV]s-ٓ|dmfi`eSp)U(ٕH-`1X."EEswUbggPh1p@Yث}I̪M~G E0LץnEZ&[DHJiD)Ԝ4 Hܹ  B#<9kJ?qﲪP {pw"2BarX 1Œ:r􌥬P.1zFM 3a'Uv;n%)`"&/T!hJ$<{pʯtp%lJ](2@[y )deʴIs̰ b'.r@t0eOk޿DJ;i`|tiM;Rx+1T1$˲h vt} qvPVˆ]mUL:LjFPh x3i4c恮\:"-|RcaQ*Tɨ ZQVM9EZ)u4 #3d?x bDSbxPU5w%˘ GbpN)mYcmq긮@LLD*^+dsC:DBuPEH -R "0&CdE-`P*go P@&bj S"p(R+'ȠCOF\"hdOԓt+)N# w2)oQJ,d9f^^U^TlDPthNy!.EN8J@RAڦ.I ^W\XbNvsU Ёg%̑?&NyS#4&,k0YLTljTAS L~lMN8 Vu-*^ЮZUsrp]uȩեp5` 3G7jyqU{-VDXe29ћ$^tW?bTLNJ.mp4a :c+4F#c9FdgP eK׃)nڶ AeU~+(5u ֗z"U^ ].䓈>el#St,s s f#l=5i1鐡0,9S; 77VH+`-s۝B ҫѶ2Pڐ>anLS'o]/r6vf沄[. fU녶LoлUSAYAZd?,9NFD+A"=2>Lry8Trjz[X_PLB'ɺ)ɦZ2 fχ;-\t9N[B5k^cl|בiU/Q bs+FT}!pz%Wq`@,LKUuRR\>r أ+TM5TªX~KhPItB2Հ!FM*abU-`(X:j6!"+x\qi0/_$[uț6_.]bfQUNtz]*I@X4|ITGJGf`ya"JVxf k QQӇ'{39Rf N68MFNG}9$B;~Ç g6gVϞ9дr΁?t|c'R]wZ$zZHoA͔_6\7v]FvX/C5QO+.6m;փexFLI!yg`rk}+&MV|쟆)~]lRԃuС 3ZO6%ؘ[[ݔ4NZ?8tl\Q| >G\pNn@arp2NVGFp4Ki ,JӰ|l6ĩpF.;p?/wY_6~^[mFֱLqSxj}*;!< R{C}fcoKPl ygmvV+SuCڍ}IW}M_-N^DP_Ay%)^^4}7Z6\:Yvme*`lCd0lS=SXs>ӈkzǵ}#G8^qn[}Lՙ]]FuJ]o%o~6b|aȀ"2n]z[~xSxW$|n[-CפsmlَZ}׺RxH~SZV9I|))uI` [Sl~Ϭ9z}zY.o{ր#-ʷV:HM>fwUF)wUɌ 7m(iwv߬f"<-oGԵ)uץF:|l?7]ꂬ]U"UtzW. XH+widFkx8fM&RR7oƮEQ5Xdžy]< ]Wlyx\<ܜq{X7n-%j%tz H[p6̑jxw!ָ,41ǽWþtۯݵE,1w0a[8U%͛$,"JC<=cخ?wo{_wE|>s#1$?]^~ϴM}?~bRS>mR2 ݠYل&:(9ORݫNMtKw%m7-g*$̿wrtmUoMf뮃6JzLE %ybŵ7ZKZU)tKOHVșJ,lخXwl]tNR'WDi($+9ШكUmmztXj h}ͿYsVI,nT;7CMV-sՐ:\̵Z =*n#`KŢ5˃1,쥇¶QD;H*b?W@^%`RX"6[%£F&It[8rpZBh=RʢF!zʆfwmR$j+[‡8.9`GTmvM##Ibj3qtxm_n`G(yWJ vJ\(?>-v}2[Gk˵J=YN5b^4tk^H1)3eKzJ4n$ K3{ h%#`.2彄܏bbT svJ1 +w-Ds,[lW95oE>T-ؐQ ©N:,s|P,˅ez`/O]Zi>=#vuFRy+3XAT_pƁ6N$^k\!k*6vVl#++HI1 δt.AQekv#rh͚,#5@woDSV3)anʇC@,qݥ@܏YXY(M+sՊ{tESn19LfnAt);d]uă,oƹG{r=qo7nTڨ$t]rIX?f7!e[H{H-I] *-JUkruZυ%tٚDV p70%h2];zR9%w(݊4v|VtyS'zP 7JX2h䩩NG1àGIL+wE9\9[^2'l p+;r CSlmd[ԫ yPxtٍ! Qb*?4ÑpnWdf}60i6qcNAI&xAvёk] 7LzJi>I!:C`wНdЁZ?OL%e>!4낭UEұ`*0ջ6+a{nOΎb c{rnN{cU\pT6f1}vvV [zGK*bSJ=[RբVeNU*!ްcj Z82][Rآ9ʬ}1\w[\]ܖ00%N õ*Q zzn遍dl,"򊑰,a.r>vk;mQb4Nuzv9mŞYq} -F-mjHsK;RӐ?gz~|/?}r?+ݾLsmŦڟ\Z{$J\֐rAj쭓tLj./^˞Z| E]OҴ&*M|,Yh6R?l*p1PKLR9#ƣ#jŠxITVmsHS%Nѡ.ML-z]hn,(Ann.4cTGzPb`U<hL!oA(OUu~) o>8(1To,#CNGwbJg)IlLײǚ\iY WKT^[S]n\'UGW$L/cDZ&.˙v6RC%h,IBH5{W5LҚK.ץm=Ky[+8jEɗdKKaOLް7d)0O7E+CT3WF<3vRhחJyFqUzē0V1I֎n,S4K^yVlnϼPsMa)f?'*BV 3Aܸ-(>)eyC2D_(+|cH DR-~GkJ<НaieKwX'y`SezuZ뎩4[L9I6_K8"2HuȹfZ_ϨcLc;"n8"Yn 7PϺS/2M* tOa-#^MG@a1۵`)rjEP|@Pi#00K/^FkZ%nQZ (>q8ݵ ,zYǧ-3E71u PǧБLa[we_)D][:[>ضX?t-k7<|ngX@ˍ qS+[ m +J?E{bxqR'Z'/|o˧߿]/_//{q}ջWn~>r^ܿ;m/~O?yE_Cx7WxorOWwW7oo.oo__]\]MzSy+|x_|xŷ?w^:?___?_pO>L~eU/O,˟BⳳK\O%i$S?'K0;21GYe(?[=*8[ަH-aJaF0?{Xj-!uC3qqZf Va&瘑_qVes")u{{j|vߧj$Bøqy!ߌYm6.ICވ߿t]~PI&Ͱ89VP)ܸ:L`7p뛰0kY-@~o".ռP3FNA M>KBM>8գ|xze *P2-;KӀb MhA0%6j >#판y@nn}vKӈx,1JB>Av5~9|m1"*z.qͬ@/닀ryo t=?hv3j@i(|F/Nquq@&'su3 X#I6@u}k JB 81\o\5BQgBk'ȭPXͷ5Ni}wU~eV$.V@$qka5NxҸM#F.QQS-$7@2!/4ZւɱB]%c_42iƬ'V]A 9 HN)NLBS@3掐0@C*4U&& | .n$@k*A-ɑ}g]UnHa}i#irMI/b3NJL!H9} )HMٔɟ~Rw&# wV=gaq !ӌ VY]>YNZsHLwa+/ @ Mg&az10'a@8wDzP %K3%LGDs.F@#FN6,<)Zb@l;&&DO[G<`cpu6O)(nOnÍi4#N3k` qZDPEթ*f:}# o( |$ ޙeQmwEW5pxB]H8<(`LmGYm߁"Ɏ3ӱAbc t:^3ӱXixAAtʤ|:Sf 'c&:K$v (B2g޳*Zޖn3xӈ[CiDž55D/wj<֠00' @a``q@an6umט: ?.UԔנeNoC.4fձl4W*`k 6R|u~tzΏ8A/v[!_/ththt#ĭ!!w/.s~8F]FXkqקS##^xk͛<!}D[_7wo/~DЀ Xe-IlwPhjdq{ezdW?׍1Z<qҐlx PcK7W*%A+]m ;w ivHuFұ6KdtJĀ @ڏ3唊d!{b3trYR=Yv҉oG$rk6[۽^ \B/t *&8m2۫ tj4gH'ZMmOWf 8^X9<#bB3pciE+dVdJ[Dق ܧmIQ-v&V| ݊ pEVv K 2nj]< 8#Z*(P ,Kn|>lB$tf9P2"~AE?U͒NGt'Q=rj&8>[L:X 5z+}NUfʝLA3=m/B)m1Yl>Vb'[Y@MaVCNrjѦC}YJ!l?jvzmͬy7UeR&0ӇR8k>>ڒ>kpK#*$gJZMb@9LϗBel$M㉞ $ Ae n-צиmڂ.۶ L&7PmwF]Uj@R-R)j쬛6(9Y VX BদJ3f܎ZI ( Jz]Z5ne |17ݶ礷/BˌB5ʡٴsE*6$ L(Ü_%J=py @͉GJ=:j0$(bhx!Xn.@KLQ9@]O.ZGuuH'111ُ>f)E'oRi}~H]9s˟^/wWo.n2Ll0;[D1%a@qPjbH9&)P4f}Zsҁw\r0lF[8Bjɖ?lYT#v*,0,f0-fu7d|H3=C@-h6[I`1'eډqd1vr X;FH29U` HD>&@1yѐ+5(`Tb&FZ͟p²iVf?w" 0?QX-xG˞r3)]YBҥ$b;;PA2n--LcDۢ|V2҃&k6fCj1jy @0zpH*ŒLנ[#*m5~ixc=Ц5'{!9JXPV{ "ޜ"T*H%F@WљU 5B,HKr}ytK904`toKJ[ .06BD[@ƴ@u]EQ*$ 墆GQdkb3I !eT2%dR558/d F%%%.FRd2h WJ5Dma%@BZjMVB@f% ݊kt]B? 4$,vUәjɥW[P^+>IS!IlS& aݰ@*|(̏Dn$t埆|uёXYUr0wD&c=g54bP8hB]*Ä#"#Kw  3Y̓QKp4F1j$Ԝj@o<ǐ=OB;^|\״8r{w.OV>.ҿg%]K*.O[N);wIo]ҙ @HXĆꂭŸ͵1$YI L>o5Ğ;4'ICmWف//ďm>E@I"oK`C ䷜{_$|U#kG1(j2ӭQ%hXق˛l"Y=z"x˥ F@,d/FSN̼(+ͬ,etfh&7bXhl&™L#u;UWc*lR ^Js|n+>b-3b.;٠&K$u$jj033'X4cU)H?Bk}%Qh,^I$D7A6rGhm_"20,uxCFSW} KPBז"TRύgZuw):Mifq @@TDoee*~E zލoM)\׸EHՃcaUJU%e# (F0\3J<GOPiFm 0%7CRӚ mT$XH͏TdV6O%@3b?I1=ZkhNb2Cm!at|QR-C})aNUD"57Er{SS ?t*D뻐ϭx#YyRKq{wX݀!) M9\Z-HfUb{MO)A'EhkҭUY{袏'pL=! s( / &ށJ6Ϗ`AOpҨ+TUzALVT-TqSܑ!Q,դ=V%Mȉ s4&-:&h_r_&q TY%\mI%FqbA OP&:E[8?S՚WBH"F+ r?掎J}GwƣA/xvxN>ƣNƣ'U5zIX,Ilȍq 5vU- #GfCj/=](FQG47gݐKw,s|e8ml|!G5+\vVmZ5StX=o6LgK`v}sIk-j\gy1dO3^l_ ]QDUԎ.kWjr Q+ր|PR!ON6>;{c%9##.İfy[*7cVc)Nl7p =- l:R ȼ:YD ;I뱂jm@12BMֈT%5tߡ05ZLK:#rsx9Iˬ]JQ2[bU dEEMvY:jEk 4"CdV yb[Z̛ߖp\g×3u6FIP^qy5Bqa !6=r¿G9q@)&JyY:1׹1h70Ёd4r+T[㴝*(]y]J$Ma3|ݍi4f*$zcf*3SDoM+ Dl75EIo[`K`A8Q/kb_3%0-Rr)@)\iZAʑH%FUQN闃[YGyVjG7M6}¿^tu_/.0pc?ռVCU@(UO_Y$VT(t.xn ,ǂDlOؾJ2 rgzbDͲF(rf#F(7KK l0l%̎ 6s,-ڨ%9G-$;/[)u ?R:[Lz]53/))U/=5YM)TH+TG.ͪXܖ8$j'gطKZbY \6iJv7\"%RS5jPrI~ba1K_LIV=#˵inqkUXj%oY\H`ql4nȍZoegSWk1OYԴϮ1qF8pkI Yj)I\F;)!u]!yM7Z)Wj~WBTh;JLreȍm 4JP:Ve;9/?Gтw|q .]s ؞%dg}>ۻcqY c8 StiAY_qyq^ktYׅfc?|ьK!ZE"s/Dž<΋Z}-}bt-8^/σښLqUu%qpFq?ӛ&i/V_8mܝ񅺼ְ;fY^erxK.aTw]6 pP,FsQ(Y{8ѓ@뿓uY}\Iꛙz0PC07msnSvV$XE]#A+&;ٸWԪց1FқʋaJgr'X8}l]C,^}p3le)&0(w)}ʾ7n?NYkpB'UI=, IsoBBOs'Kiqv]5yT2p f \YH5]>Vl*5)>a@h{Q-n{St46پD6vXrR ).rnNcCC ;'zr䳑l}/"2|ĠьGS\!5L\0(kzpL8'H8y]Z5nhK宴ℂ] 2JܕyCxqSYX Wpֺ:+s\ O8dMGd-5zr6lSC76Pu}va`L`+ 2SևaYd^3ov1hc͂C9e~G \LNH7džs1: +#.mhQl("@a3a:ȅ=3ZtQӝ?y5n C5ÉP-Jv6Aq]?tfَXr_AQM*x]DwLIǾN NyK?xj§won7>-!bj>ZԎ芙@wq{%*&Hѱbt ·w50$!t O;6}38@T5%}$ LIx.pq 8v5tm6\[alߒ3%K"$fXj,ڝw.6V@.9ׅt}CCG 8m4Kk'W qnWXݲT9 ^=;vcEU=0܎{Q ?P?k}a\u[d "!$,Ta=eڐʊGRO ؖ>_UWPԜTkmP7J` W(XKdNLv][+8h7dʃa/8zF{^_v*!7L m}Y(GDa{+-_5pDvogXJb0\=[-|FJgO}Kѥ;([ψ7$w]c,ۗw8?=VIKP˜e-˾9ۗ&2wɪےG&K}>]`\_ͨ-l3Xlw5qCh3]\='*$ɇ[fv[3-eֻe#ׂ 3l:}`s#D A NoY*p%Yn}ܧX7:BH:tvw+̦&jNq߈fk+l -Y?"bjy$ ͘#g`}'u'TCۿ܉肓;_%lBC*]Yo7~SrP+;@v4ݏhc9=?!sss$g$ Ͼ,Y+#g+xvxPO%,=۞;sya OYI76>X4hvh&npn3?i` xK5z4Fa@/j-xm|;e h:jr}"4iXBoa>-&^WG/_ݼ~gN]GOW<1'cL~uXÓ˻?nۻo_Շ7n>}^|?ko>~xusÛʷ///׻pl^6WO/ޟ-"{~Xg7ww{w}~wwwՏ_~yͻWoo}|n^||~o^x~ 9U#>?yy7?\O}~6pû|gWOW?\n?>z~u__?߄/_tų.;~uM?4,͋Bs,\8MISX;x$0'Fן0 pBI *([p$dl2^s#s3(\ @p|ȪݴFvNS\'-{!4 /s8 3iHŮtfU4 mWY:wwjRi}c-N晈De@eIQ#n( =k}>}UR[9PA 0?o-=jHoSlr6XYxz&͡6S,(76< 7qIБ2P\>ezM^i윰|b5cGXq`é-Q?L*[YeYbG50ÃeẀejZ\|wxi@k74H~gRɶ_8f<1t-OkWkNN3a.Ih\s52)4\[xFj!n;g\6a$bEGG wu\g/.uq~Q<E8|wP{>w|~eǂ;T}0{ԥq+`klVpl-*?3 t1D`C|L' "e,-7xAkkCU}tv܉TiG p6]Э|m3Vk=oTr)Mle`ʁ(xw" y - AF%el* (8m|5&E&,He6.x%W"'DS \cupFS-$ݐ'4 <4: b{lMR{M `c9.s{Gu_J88 qBDj+Ұ pjgpHo5@k{U~$59j$ V3R@`C^҃J%" ǀ58َ#'7&xR6]=j0 &zYpNf#욜DJfhMEY qN"\?pj|jJOP춠EY"&#NG,6NTP ,)@:v8h˾u1t0)l*BuuMQ$N5F*Cx"hOWvt'P] fV@T+g4bn!hv"m99#'%UoX-~%F]=7Q8 G8 {3aB,%ec"#H+<$%0 8T!(RuCJ Ka G -G0ĩ,7& >ңOm^בj*11X51Gή0@`yOĐbke q-(#}0o_yӇww'嫗5xhyGLOxM~'|p{:>ӀYa%]8?ճ/#Y.i 霶.T+xz~8IxxBd>`J\ͷ1D⤕jM w$2(W <2QziN9p;P#fhҌu}YQ}^~'|5e@>O\N–YW2"p}9qÐDebR xvٗndC'xTx\|@4l~@(HK _B}gPy%Tˈ*Vw'uG|QD]OJBUEu8̴a8 }+=8H"9ρ;9cBȥнX^ш$e2VV>|>`;cv2~gQܗ(P'EǏ2g߇์sozSdo"V:Rlc'᳖bgMB.N?МTSʾIN$&%Uˍ*%(Rvr8r}XU0bS](|Dbb-"rsΔ#`߀ME"SI a,|N^CP4(((z7]B] 䱡 IӠq w^%S'-AILUT kB52 {ڼZT85ϣ хG4I4G,rRّXenLբBA4:޴pkD HJS_D٥󒃨fB]6e5bSÈ,;Yd+ۖEJ8 aJ QyMa[(R`Dݢ:r~@kLN *T fLQ/fv 6_x$L6~aB&H\ ŵ^7v0CqsjIaPPq)zp` <2»0x!$+1MkgT9-XE!Td%D 6!_JC۶5FT޶>@G(Yd! X)TBx0}!f.^EïB\q{gg8sXO/2 O3룆)qDDT .UǤ&Nn ҤU݃_xN k91<@;]Ad\4{C"yoL`8L A[#X ])^6H)t‚K^CfSFT_掔Q>`p9ǖ NIl S ^K9A$OvJo$.H%1HaT͎2^K厼HD$۴)DC xYo4+,(CvRܲ29{DVNI *T.z>3d$k9.PG*џ$&fSs܎oŦrYG8X%xx4 )>P X4'QΤlHvrՐxŞ#QyJs_) &:s[j@6d|@Cw,U[z$F-ʤ?8ʣS/ZK Mv)'RC}^oǏR xHgUS*OSδE!1:,*r HF\*_AY0:e&ɧ:W#Z,t#T dZ*)JW43Res zQ"{Od˯].9sF5z|0}>>\eؑaG%vd`'f+;pf\=Xݿ^߼yv~|ƗK ev|/mhUJyņ[VK*mFUmPnv>r 7:75aJb>&0 } vr/  0NnùWxwiۘݥ6npvD*O[床*cG. #?-&`/*2!`4cU{]XnwkSlI:c%|M `k XfGVo5D79:46=g[OK:G nؔѺ.ua_.̰U9.uPOI,äAʩe79V5>wԛ['X].=& W]BlcRDNcȷ|CPJ .1!T˕(gwPm޴!3OPRiBR?٪Mn9CϷODNY% mID[~]ĤYkV}a9]5S(}R05>KuF6]0wlؠAQzfrܬ 2CDd4;ձn/;gb]_pM֊5)J\фHQRjG[c(jJcnsa.(kqF>;,W} q`s^{);UMT qq9hKb SIvGEJ]F)GtގRhVs*E+DݻJ9^ˤ.Dh6Lx7ӨrF%5m hsW~<<ndJs.h?BlJ-NN8K^ PjG[SPW"Ë*e2|&2 6 zũG-YgbBg\MZy }m< \AԜpBĪHȢfE8'Cv10GFq1_ 5$F' ϑ Q6n6Gi3rUIu$4)Op"ɘG+9#UGQwsMG{9ͩUkјRjBM†qW04s "8 W/ ՠI"(ʮ: IF ']Z&A5*x*q,,QaN(KcFgAGH¯zLiu4NLU#y Em-G9k]ԮME909 Of9B']<—"^QTJSM(w$9#讂)?SwPu +d #%M$;q$ƗHN{ PEShp C$GqRtV\*&e'.Ɂ16P֚5c={PUȌ_@"?>WwG _Ï*9Ճ&"(]5X{/l2q$-0Z׹(=jxKz^jI5 ʁ%p F5DZ={`|'1nx*N ʧImUiJyTtr3`PM5ID7k?%i]cטdZiЫXP崆_Ek|x 6^`׸O]&G1cN▚T!ͷ2Ŭ.JͲ`-,?'ó`qB9y̫Gn O_h0%^!om.r m`6ϰvzR% JY_2ӂ:Y89KCeqRf)'jB)٤,o&f=Af{XkHMaGpaQHƴ9{fWHDӃȷ0M&|RnkBK5լ,BLB; ]NFzŸ*A ._ 7|5 ++N܂'kx)6" z~'6I'1?p eVnP{Tp}^<9JPG`VLǻĆ.Wt]5"' iF >N3P=Zim⮞SH4w7N-K7Ge6YPwqbM7jT]}lʫߪT4UyY최PC"itXIk=)3TE%m-%S#ѵ(8LP-6*dm`FXlhF69{&g#{&qݽO b|;46vi=b)Y4DZ'1G| &,;2  +|s.KF PeZ4g:\@!p6!#!/uZSMc\P2q#OFeLp_6۱%L8He U?ن8ґbb =3(SHDCuf8fwX[8e'ĵmj]Ͷ.j{JA# F zh0|4Ϋ 엎$; |%Pr8zfNt}w7|?>#|zuއOYzљϏO/2: O'3ѝātXk`19,IOFg7MB蕚`7[%niI m'pP茖ȉwLER7W]B֮ 'ԬK$g&A33*Xf&z 1DpMgTg|GHtSPBsK3djjX1; k^MTwkx/(GXT£kbvg&1!`b&KÕ&ֻfkt}XMɉ]n" }8tDFRrU>q!=FDV "e炗Lojave=WHʀP?{VF/Wі5?Vl-BC#)][~S.6l`"ˊyyf=kFBT,QKs2::>(L}M<||]HE|hO QGF"EڣҿʣZo}G7]- >UkVj|[>]JocҮ wKp?/iuqu*N9>3=VM:ci#uNu(tv$K'-? P<<3{cۋ6H?yҗbJ*uzLyl-:[*>Leґ!w>X;49e?H=*q4צBxPiY\7}N̬74~Wvf 묤>uK~ei9tR"0ErUZRKbN^?\c|۲#U@%VYz{? 麥,1(Q0;lsZ[C{? 񶸟3\\爴Bb=P,ͱsX%2 {!7jo=jԪr?DЪV=jP.Izl?(и:Z[jm#GI"ւVnO+zi&kX~@ЉN&R0D !jΖ紛\':PzMlb5p4[]G_R@ !%AvͶfTN j..H R@i9*mLUE əjlJ*֖}fmI"}$0WNt({6xeVKfm<|@K=ԷбBQfzm$E3_ܿz"&F83qH?|闻ۗywws_<{qu̫h{޿xuOxw)ڭWϯNo_׿|(?D({:ׇo~I˯8NOoϛ{u\77/oۿrww߽߻?.<w⦼K|O?|Ok/Ϯ?>˷_&>iϾUՓǫ?xEe/;~ߎv_~Ee}pQe@O >NK!:DGE p I01jj:>@Vz(DC<~NLpP8(o b RT2䍂7oF}@Bw"8 `%6&:nnQTp @RML"^Nߐt¸k0RA_ w (oGYbZ[ \3N"Qu}Tgh:D 2FzsOX=/I=$i –G$q%iY<%/^}R}4SyQа`/D-SSa{6eOa3yz j$l_*ON7OPE-GtK1#d\@!QNJ4e\0b)K %HJQzHRcHÌ|AI5fw#JTTנLg 55OCW2MuYs+X/-rB12)'- /oUU30<*OKj %{~#+|VӬBHTƁLVK̛<-(IH(y W_\S*b#Uėemja9"s)\4SFf8f g nKJ8iMWY &*3 .#[C$,Oz'7f%qѧ Z?x@Wuc+ l\I Y"+5@ )\RLzš,qH0 ʦjdՉ(jh3vS}ѺD.A'%%X<$lh5@\13fZ$2\*=P&6܃!I48uivKDŽ`~$ciwb:: kNOL y$pIY:dgbBgni8X%tf7J0{g3"WiVG ,h]Ї<+ג]E3¸%0Hq)' yQ^u/`<ӣOpk.ؠd+EoV7 nPEa 3\y|냵aE+t/`ŨLU@,@'0F gT`{*di }nh9S9Šlk֐UEr86Ƙ }]AJ(E_ʹMBEmCkXM @p8L d(qܱ,W!Ir:T0Ŏ~ tvA; RjԊIB Cʜo'' ȊQa8B9hR9%7 fqðXdGWF<[Y|m~h~mz)MFu6?h|6_pw\D8ڌ&-TU&Nz9n]lGL|da09 6G PAT lAW׊cJ fLypL fɎ@֠?XNRu)hBIpv^zFy)U=x%x9gheKw fR97 q\7C Ͳ{ F lҎx!⌕5rdȹp)09Q9BΆ8ѻ>japk+y,h yspQ ĥxnovlQfxfn6,MhmʊcZ*h[ps+psZ6QMkap e%#jg5O3Cr߿ E7 p_ҫ8Q^l+ F0{ۥ& 7TyرW)A*Nj+6 )Oy9̀;ܬAٲjbx34P N.!ª, RA BK9@z;a78CG:&~lGgύՊA\&! ɫI}&ތBƿ3]e58p)و%Єx3cxy]C, r7EsNr? i2kxBzxv rܑJPQ gk.!g9kyS 9 rW 93$.Di)%H ?p._ƆGΆ+KOat\8Rcs.ut3pf^&|P$,S3 KC]AX 5wLetNL0}0쩥 -zqS%T";Zo+ǀg= <+v`8#,svlHX2`R0KR ]8eQW/Bs]ކb P^pw*.Zx M4V$_u\ b΂S|!hZ** 08Ryd˜nݓH'ۺ.R5d5c֜9 KLGgE@hW3:<.OY"fBVIg1͜MѸ0lI9V:!$әV lILn/uRԙ|Pl|2GEw *_()؞xҼlwǢp1fl`Ow@͉,%d<RBMJ^Gk Հ?El Z2ykg? 7?KnfLQ_01* gŎH$};IF4,P1 9w-*jtӱXk&/kCF T8^ =WOe!®q \hgf[b&t 1G9Trt{NtA"(ڎƭs3ō19uh.+\J%ʳZ]ntc%0Mg*H qÎ&x>upEswG^c~BVLsʭ c]pmridDVin61j@ENJ]R"Z R :Ћi ͸ 9uо,SɂZg>!Lduolm42!ة*UG(6i2#)[ Wgf5a i5+͓QbE 'tCbLX3xOf}qAtd:f!Xfg41vc=MtObtXn brI6#zt7efM.-7lO;'A y EE/Iu=LIԋVʩZ#l'9ШygJ;LXQa.zS4l!FMPܝ*'6&7'6"jVB籆\L{ dfu! dr4騃QZtc*V "]JsBt-n|}B$)6ВFæ=!;˂lZar$Ll2hC9cC>y.7CScͨMqm]黶!ݝZ(v8˞ͯ.m"G;)ӑ&vS>X:]aQRlb: v2/`n\I[:tifϵ M aw$l籚Yŷ3d>gDFjKٍ t`eL[.ze^DSc;y&`ڢ2aB{*y_mV'bkEw U ,R-]ȤВ7fM+{jSl=R`څGM< QUd'aT Zye0NJ냊Su)TRW#/\<:]")ϫ04,٨XܞYMHQkҨe3c8Vʸڼtl10}192@JyX@Qpl<;yEēIyxRMioV3U@'O57ՂDGGE4{`#a%o'm<^H3;k Z p0nh' k'ɨ %Wm4SQ\o>f([Vf{"i6Ѕ1,_TxżANmeM܉ݤ:'$bHoS$  0qyҰKMwusB̲wg6`| îR0y&p;T ` ЂI=n s' )IfKZxPxH }\nb.3@/.J1vOve&_qHfC (ʐjJ[%΅/ibh@ "25@X/XObqH⥑U),CXЕ @Gu.l,5k4NHx5Y k+=஡VV7 <2mtT[UMC=67cMMVlFR3in1_u%J{]=v8-v6Տ;QFۋe]Umb>5@gct?|jZ-<Ѫ%ZP{Vt/}W!_{`ʽ"24 @!Sub̡Aϥy9O/l"$;A$,k$eMJz/M3bڜLu\.͍=JR6(S3=mf,(^ \m~ xRE|(ǽW%Ļ;6&Cd6ӑK}>ӛ:X^[jAf  ?] oոF~%aV&ٹ^  KgkΥ3QEBD=%m q]aLRXRGZ(,J!v!}?`ԲfK~-I$?R0SW0!m1at%j,mScMK^Y[.-;KL%4;A8937YCpMMc-)#X(cYar6$9͒: NR}$p+)+u)w([h=HijuM谟Ξn餳[4aq{G:"ؿkEh/K;A -Ij 0YN+VM 4sώ;o.D ɣCFzxtyJ;L6j{u,)ӃI8E F|Y,i^)fh뵽V /imWTe40{0idͲxek*]51ޖq9jU6^"^PKsJl*Nv9J jfſ|r+wJJъ8s_thZI5@WD) a)*>=jvwm/{Ӷ#0V?2xB* b_) [MoiEI/AKK C,TIo"rEdtSE!nHc0Mi|mn{Q=,=ۻMwh7Ik։QRxlPS1z˴Yh =7,^J@ڋOQ[LNKWVTw[p*&50vW5M /jhdx f8ТlQ|No2f?x0h6Ao,|e׵J5LyXKEltؒ6jYs݊na6=iKJsWSA: `s>Ε{epv[dO`j8uD6нfD/̵5;elVR25`8OpsZLiHMoxMKIӞ6xJJ2sE3%ɖWkq]FH3Z:~VqSOןHN?=XMڅtj.]jw7~{~m>{=[2Q3x%i3l^-vlf^)o& vv)T,Ն֥w]`K_U]h]HgpF[raijm"[t½ʤM1ߨwieVt* ߌ@"u#쁹HmVakmYCKQK 9bex~mPl@/yͮhEvyU՚pNZ%rP'`c$eUOMUV^%=k0Fa;]nR..($5-O3zx_ Pqۣnhx2Fdz*]r\Z߁)4y;gs7޻u`-GkQS8 riUy=@lF r c[y wW'{Ҟ)O-(lx3yl4HPWmm  9;:@(|y_! CهDOHe YDN"XPsFoo>v"ֆ8J2W6b~ S FԊ[ִmԑ`HË'x.>87ZR=/\ g+ɉ_mF1Un r)ZLARjOc%_lؖImPI$t'9.ΪpuFjEI"uٶa}40 W/Ղ՛kD 1᧐qi1+7Y^mzm&lj[Zq4{ Qs%|gh@k}~cLbscjlr|$BsJDpeO d vɋـ5׺sP+G:_!6y9pi$6g@HD9bNcC/l@7O75.eE!|b!"a#fkY^~Em{-;um%*,G[`L5=O\EӮW'xA|׫_8/\BJ[aUS .M Rh--Lօ?uQ4QAN\5"[aIFb`H|yH ~kMTЍ-4 U]ZpNzX]Mzz4Lzn$i\=#8pSNyėӸ.ޛwL?jx>{zwQƛ~h )xщJˣz-Ŧ9m@L6p9u^|Ӯ7u2r}hgm#9(1u@ou@~h$GNW>"떴BT [|2: -(P4%ሎ ,+NS^d"J\봠 2!7Gl,' k>=\QnU!=];1Ph ײ4KGYȅ`Q:ENs f|7QO@)>ܘ-?0B"h^ζ M!p c 7xB1 cZ z8j^".xV0k 0ȇ^E\"7S#Ndb'[5dAo8c/i*o⁈lR,aH`Ӑyp|:QxLBi2HW8fesv+t=jo0Bg3j9fҖ =M G^Fh$VGuM7m|TT"|Llk!T ?iCyu/ُO^5,/?|X{Ldҟk?ϻ~!|w~z׿W?wަY޾  L7/w - S7?~ݯ{ӷ^|ۿ+n>~Ǜw7a>]|}oNI?b}0K[NfXW٬+TpTD<-qɬ\/=DʙBA6VΪzfђA 1i,7Qaബh]Q+essFDE ._ըҍ9i4Q7YIeR'ꐭ3@ omK*",+l/Z}vD8$!a'<kDp8J_%4)P:91",_RlIz t"cۯAV#d4 `\V&EƢ5~L])lpQ4hVOZ[{¿b BWpH+E6xy4V%`q -:,eyRƔ jؤ.P_IQ8u`sa1'ahAviz>e&MC% )ms@3`IA g3F4hQv8`cyC*դ7gvwJJoAxd,S3+e@Qgs^꾭Y9.B^Mw| y6P(q016)iHbqY#۞fLQ ?S4Ո * p-*x|$>+["uɞ{'L9 G/Y_7\ 3o]4_30~qD~/ɷ>ߊf. 7'<=7|wcp%0z~@(u\?-,]E^ &n]::^N Nuv)oe`t<˼#c=Hѭtgx]*, /2/5h4i8%{M ,)f,44@븕0e_2w@EY/x^(Iz ϕQ6vsR8)h;c7PkFɾ^.aX0z5Sͫ_+Y7o߾o~x4w{}'=Y ́LCH9ly9ynPtƷGy̱"~{ nYCz ` !JH:fYv ԰cbs4vӇPWYīڨ+lV;/Evwe6")&*(. PHXLs=DEF6+L tp #X2 1;ue:#ww uH.0Ho=> G sq[xg@ slAJތ\&= S @f9/Žk'*tRF2 FHg#L^{jyx)+nwg|:MJZ5JFoj:)o萱Gddz8O9#X6,[@*X4JL؋4qbنsbcc:[.2T^a 3;CgڽJA ́AYS%ޓ8čD/zO{~X9ا.w8<J͇޿7_{oqVIMZPYm*\r*[05PR%d:L9gj(VB& fy_bmIkݕ IE;#.:B"fP (Eķ s$Zr>~} ,!\Չ^Un5QQs6j{YvC^XɣV Xly˞%^j"WrA+ 3>g˯X_3m0jfKTji>k'MV,xӐ}k-h80> KX\eWôZYCeRN-"WCR IPwҊ? %%*ᄩnM^\hSe%dZYk:8!1 P?lfrMM"aITC-Bhڍ̗ ]{SȆmmG$P?iPઆ1W-NZn,NBfJxDqV۵8I²^-n1WB%zk)URsJL:Y*Lra5F9[@kƒ4Xڜ+%y4%S Qgk 7Ra"Qhݶ+*8  K1UhjyJ\xCAdX{zHK5N,Tnk&Q,S{&C/ VBanv9eQx!*"DuYQVXy,rVt0 QNڤm?Hɨ_؈۴4zރ"3'iORm21AhE\SX%gCĵXlG$$uJٓAMA7R* qijpyB8*HCij)c&GDcWP4.N:iBglJd\fZʖ!ٜ<#m@=cHU9iθgV[p?/IC1ҶzxVjNqO޷o^OzT Cc߿7v>w.<48fV3cpۿ'^Wְ6WUı,]=<P9,643A-iTdjhjL9m)19TecCxf[CZHηQmݍ̨]9i!_v-@.p][{Z ,sS5CtM.`sx$ sԋ/Օ2ۑ:4r?r5s  j <;k|/ɜ(vj>0 EG%n]k#]e(I(\)d  R +!YBg^bt'L$fXBҴ>j`(j+=`-{VvJJ?zWp<@q ?7X@~G:7MR?=$ tA~w|l'c 4J z_^zj҂ݓMkFˤ=&ˢr%" 1YcDM``Xj-ིr -֧[Aݱ&lk"ٙ(ʗm2UאXTO_u=P4Wħk7Ő$/~ =.;Ils4KK AׄPp.UDu[%,1‰5&y*Jv'%jT$PX_P6j l1]tLHV=aY%喾񑅧Tw,-OݾYJc0k3GF)ũ:J4zGbbSg "s9\uEP]8a\Ŧ˒ KqMAXoe֚He~ &FVtCZ!_=8Rͪ )W֝R,[/pVg\PN;Q5C 4S6TjG8.lƩߠH!/e}ӗ^AF& &m`XB/[64S`b8{:Tەt.Wa̸eV0Di(웯v_[uykr'c>W`GbSrU op ey6jʠY1:K5~ ?'Ru錴A&"iBűT5%^_bjo04@i4Yl4aŏjuPB+`q $ ]DOLŧ] Iɸv/;JE`78n1&tkfzb(@y'_іY-ME~5'p+VD|ZEbmG{r L2uvPV^hfx-d7+%kdD':dВ_ؠDv. :8Q\h˩}TԢ P0%VQL9V<5yE*g r&o)\l,B`-lZVpfDz4 XtN<鲾J)vONlwǃUmYX#PЛr2_ϺU%f`hz9S`:1Lկ0PgU4ùxS% 'ӲyϯOce-SD!2O§5 .> ,2 wCJl7aW+FU,\SdLy `J+vN^gnT$*,4K=?c9 }FX Ώ9r&5jjl--k6)-xj"@Ŏ6 .%nP8Ek),p*.QsWge4J!]9ANbW P$n86Ćܐ8(;ӶqtyD6gUq\ƍ0N+UU05[SR&4~'u!4ɦ k*7Չ'^ t9R-%96* 8Y,AyMʏB^&YT;[m\) rp G5/H QD"z['[Dgu^u״)+D7YlsCZ(4oWO;[_ي7ʞ+f",$Im%'0>ަr['a@mm.XAV%"_G͹hMmUZFuǷ[]P !ʠ[hVrqEg(V`x}Sj(OfӥR4,aD m68-mCS\_y2aŔL2TٲcQ`waԖ30BfA=hQqHZU %q85 Cj&Jj61̊4T@&YdȐY'ɶ ;܅Jv}CJ!I4Fj %a:d#餖qW C_rBԃXJVuJrH{Z׷sUw:EY'㬒×C9;~ۛ{evbO/ĆrN~ݽ;~&7=C^0at }=IΓ9"]ep]x4։Y߀i^eRbEvZXli,"hZl?sU5!8.CZ YvXf<&A. J9Gj'X4dޢ+h1AZx:Хg'z^ D*i6KVE5OZiiGI#5ŽVh,j6X?gM3H?J=S=::= 6eCR9.o{lZgRRjQ-WbwEHf}"_V8!rNy:0Ii֖wRfOOō&߀ȩ;4qUQTZKH;&8-mdH'kh:k-Re Zv:OH9@ Rk 0QO5v␫,N&o""ٱ$ 1Q)SCuFfgeVC;BeآQhʴ6#0u2"؋K.uݒ$ Q5.Ѐyz)3yj[9x*k[ذ9p t .\)7ʄj. ԶiB $c2w_ -^;I,BKrdfhs0YԱ5Xpv!vGG*k5xFn³WDY.MG rdHMI[eiqSAEu|C׍h$kvGOyvp&\T:GԸG5I9A]  -)L Lz(366KlfV΂aZ x"6Zrtg*@ƵeŋDiO5G{ֳ "V|/uR^,l ^Od;dB3l=O޾2@6˧/翆xןt{Ǘ_2Z;7d OrUq,@!TW)ؓ e-QRWh6 X}[9JՕjFF YeKl)nJd>zk@sa" 4SP@PMa\+E [urc BC./}YUG3?OCñl˜J)IbQv6V +{mi"<}!^rJ]EGGu5U,7F|zjrhedA A\Js~(7K§lAY!]j/pyWw1ƥcZ:]k}(i\zO7x}lk\U5^/Z^ezI Wlޣg@V *Cyo6_U A o +7J7ě%-?4@נmQ&`cfox|zth]$mTXCi6ckkBt(<ض5BG-A72w;$s.᚞*oIOԼ$OR NPٳR!f=:cXI=<*DdkHlP69aNqhk極R׮Ӫ*:xU2 *f&iՅ!]橨%9]Ujf!IbcZ'u'<|MeAvKT|yGHU#$ui`y$9?5%M]`d  :ӎpնmKpC% $h1"!EMs|;X3Kj>:{ pՑ$}럌a>iJxJ(,#;DˣH?V&@thdˉcJz JD4M]ĊR.J5Wiѝ冸Y]#с*FACУя&\WOjJ`5۽ZE1Hf}$qCz<3A(0Y1eh/0l]H=^b@y]nX2(]FJ0k-$ԑi&ŀ,dO`J`Rrzbͬ(o VQICvq|BII P_Q19omEu5vԀSPĶ''TȎտ~#ѫG_^ſ=eߧHy9E;RȜ9{QXXx)Ek UV s5p91Os9#mex\#X@t!S߲60e5i#r[AL_cFYV.\Yˋ6r{WI[~.F78EMM?$jА!^LېchFgVQcbɆu$ $p54e@ټrRNjHBe2ʻb/C*#!͝hU)C,?Xm7XtI׳RFvD?]ņ2IfUԜX|Gt՝.ߠ(w`~ bD7ςp](&\&T69347$;7"Je6YqTS*.Rbr{ /}ErJ,}ɢz97d w6XB;d"ErCncsFR*AT"3^BD Nr_6-3Yk [^icu:@^@f5i,ݣ=kY>2l'K/VdEM5X#eSc%8iˁkiN*%6pSJw`) 951] dc.=Ch|J]H|.(FPq:G9oMպXۂPOIXTN;,IlB=-;M&Ϝ[/uue E`g+_J]&ǍYBf+)x K7km8<|i!/j K% E4Md5J;40GF2$yɡ2K]u@40}Xqݥv`@ꭽ)tl!XnokۻG Nb"/3ȪKV&gW/ OT$~Js] Jo;>`5nu7hD\dvCH ‹{s^FΓu}+h$MUd*) wET$&-ʒpa#M-8d"LBBr BI@ݣ$&s[ŶKT7Y]ǩa>'zH M׾żYy$"؀7Ėu4Ntł&J۸yHăKd5PscM:.ޑobnv|:$)2 aٞ %>joRĊIw-U֡^p>ɲɝHjS vlGereSjēO[C2'm` zЇ"F k1Oav<S+uJe{KO^UXY|%Ѣխ(fb\lVZVТ2 rVDM[arvMhV'93%x(]Ym<2*y␔:,Qӝ]aZU䲆cODwTz>@^XjxiU ' ߽O|^>y(1Kd%>zw~~x~|]ǟ}C)"Ͽ{ߤ7!c)?x{xӓK/{?<<_?ۏ?oާ~M_?~x}7>ϟ>vބ~yۻ_O~ Ƿw|rwX\<21= r e5gXq/3%Ȗ%H%.hC_ eer3Iu0 3Hq2tP= /6S? J5>"vۮÂnYAPW^Zg|h1aܖSjXW }oiށ#^,h{z1 uH>%''Uc&+G"jӂuѸd {qr7J3}ҽ915˅ ~"fcIRv wX)7nj#9p5颶3MWK0ki}vH$-ş$(cTEu8x'[j{eoVt!#$ױ~LQz:Sp h)H9 3N5Pd]-ZͭA1þ XXZxFL(rzM Ԡ`T&$jjbzz*f=U5To?ScSpxn<3$-:.crtqW_ړs>xӺtl煒G^ ?XS1̕ߪ(ʸpI^1ȱk`: "Ncԉjsȇ7Cޛs Bb]N,X@F7<-4nŸ̈Y8F&(Db cip,[q [ܗci03kxfՅ]ٸ}@[W5We_,eXg@&8[uڗYxZ]3g 8@cjw8W$ќg=vdhsP][Wu7˒pU&=b%X6X 1&M8[v<O^xDI:J'rGQ'lie@Sa*e34s', k`96DoM?QQ4iMd!HDDǂppLYȂi+yo~Q!7ΪkmWڙxc8;Ϛ>G 5^)̽@V \`v;R~NOa-qdNƮbc5MX86ppClTRLNGi\ mB};tk rSg^`GkZ]'M 9Ֆ~Õͼ0SX6a눷'ɴt D_N)|e¨qS,Dx`y+i] 1h@jM7pZv[&mn+ tvi'_:;ڀGZB][TqHQ<-BMtjN")lBы+n"L[ uDgC8U)Թ~PltlM!sRH?at lfնsfkI DP}zf16Ñ9O0P?p'% 2D|:ƬvH7N aJIU&ߌ'|;oϥ>ޖrZνܛϿ{so=ֵ_?VV~7؁o~~z$/6Iך{Wb{ndwL=!2(og)a/"ZC28lo k5w|Ʈ ;ha Ұꮷ~͡iyDk09Fh6=٨ #Iˈ䨉\p@BDO+Gӹѻ$߈mc}wy}F80kc 4;H}W i++#-ph-ܟZT3l [9>PZpˁMg@|}ᰆ ]AU#O@iƜ*+ uq`:q@̆Oa!I \C!jUnh@ (?ּaj@Fmm]>G1`w(. viBhMo.5"Y4Ζ4ݯ 7\(uWte~ ,dr7B<'9 vxli@2U 0`ٺj]h0޸̂'ooF?]of v$6*V5 s>IꢫyM[\ Hd%#zH ZZOXjUD^~,c7=ƶ_??=U XaOt޿ﹲ݇٣a&KBUN u`n'\M]&ɡ3[ 9BTU>|fz7쩦E~X죎еj^#;w3F{-ړ|*037M[52n:`ffE[qS0`D=3G`P,v.l!yt+ i;>ۅ==6=R X]K`3CQ04}Y~%@9p& 9}ўRtOG&(VBwlvf=3bw_g ʪu8+̽?p;zZ>tu2,X3Zh ۳32g^b =^1` Rۄ]7kLX ,m2s %݋ Cqfa&l67M,P9{|YWv\A^b 8ɻJ R[їhr_TԵݭSBs񒫰%61ʐA=p?dVOfYSn~\۵B~x+sP]XЉ9`bWHC+2ȊY?XpR槻OKob!cß^}Gކ^G0ͧ_r||7twOpu` GȠ. -}%RT5+6Eڿ7H7R\ H=}}<0&ݭ8 CpGCdj'pvU9X,KR{g͙= V8Pfr\6ۻvXY 7x02 HJ/qPluj {V|LA2r-ldLk&Fl:ΦBr| b5u2"icp9`v@w "(l(g̉fKG }eߖꀒo h$E( )ؘ<0S<,*~"dG`CW `I8ީ`$5:|%R-utOD8hhQlwGT!e2ͣC> ?hARB!mDzfc h-\9͝r>Bܥt7MצFwYAs(s3gFr6KJҜ"ǡ@M(HbTcf<a_qRwfϾ,SvzudAEhdlW'IXZGHwqŹ31F[GٮB,z|LPdؠ=耆E:ʅ ֑ANEآIH4/$* gjqtL;ª^Pz8TS3(2k*a*v|d'1ma-6&~8&'ms't F424̱*5yroO:&t= q+30jCRaBC ,LByŮ*JNƒTX;WJSLi-zy :%K;6>^Xetѳ χ$}VR^C/qo\;%߾.+sX͟T{.m!5_dW7XloȺu5IT>B1Kk-uYpNg0 ڲ#kđnBq8[/u)[ʋR';Pc0Y!}4H%%7I1pJcicO94T.8YW*|B)8uǶ?U)!Q`rBBq:dNDk0#?9UGe=2dΆwXR0Q #s!rBnsVCGl8lSҀSYSG0tʣ*Jm A9|Ot@? PJ'vp=aX08WE,]!JIs٪R8JLX1{p&8%0p2%d*w{ŕO6γ fYY(5]ɫm՚t(,TLcUrTtdFkX'ۖz8~*wTF"WĔگ/}ul|V8>dvUw2[w{mV{#Whv"գB Gڥx "ӽc^<{˟J`U՘paLXJ^}˓:߇gF2WMze'a3xg_x6{Z.X )B]_{#8WISA2&6Xp_xx@.疔%e ga#6Yc\DnɩI0/pI/ʼnDxŶB ʾu<`*>Ǜ<-vh~0 G,@3ءyWaowf_{1vFd&RNQn!>ZBiL:2P\ R=|xQ j/"ʑ#'!lB#wT ]AZ1pA3UI@´@vۅ {ka0z9Nӈέ86\.}ح"x>T-/r'@R2RGU\lΌ\BAbh`°˄Bv7V/8ǓY̚VxƱ[+[ЇwQesPD$&vP&J+@6Mnh=~k,7A'-|g/kjx &ҍ5; &n+a;Fl}wN, ĽZW|ZL-dd}E|f7\(0^[Va`թ4߮s+_ahtX][8XA!`|m~ Tq6]ne9YkUUԨK-os25<' 7d3jڑXdrkn` #۩Wv*ǃbt0JC6 {!U1)E(v({kajO 19H1T^d-mb -#MbÉe&9ww b|]T I(!6d;LYwxٗWpOwtO޿}`?^W<Ӿhd%tمG~ThcK&&k*alq(͂!^04^Xj^9I n2X>R \Ǵe i`30i{`-X6?>YWFx"D>? 2O"9fc&>>B ;ّᅮGxPlmLr;\qfH+c{ޫve庹溹|_*-g:~8IsX5ݛ"=9V]%w:P8/Ԏ$r]mR0Cfbԩ^^yq%Dη)ų\EX&WZ]AK`&g6I{/ɲ(v!^' pIK;#ӗrv.$Woh0ouʧ?٠Pxvtfarvim=u+~ezXJы6d[wK3p ̀MNwrr3䉴rfp &7J.Θ C쮣]g*8P#:Wᤎ/CMnrrMmZGn<ȻkཙkFEJKKHTQg/j72 .+KŝlR_pvNlzk>Sfexdf;c6D暕aỈi{kbjMTk{jӪ*b$4^#2%̨rԵѺaV^<O(j2?_}@ZH'_T绷wRO^}?Gqw" OyxoߧHLSӍ _޿O~Iݷ=߾/^zo_+}Ӌ>K:翾] nFzϹ7O>_⫏w{ɳۇۇ6yz폏~O_OyX"n-Hgl ©-Y$6cݚ"7K/I$NgY!Ew%MǗ(#u~K㹠C 2O~񨻷_$ꢔwN}KÊҖƗX !2H5sk.7{)Oq RI ^Ķٴ&٩ lSw{.}ټ (tU^6,kUk\l/K~{\ldوx;ޜQPBHvx"V&SД:!c ;-|gaAt@!9v.evӅ2t)u|VoP5HIf.b30'xnh-S۶I񅷋`(Ezt'twu`r.B;&ɓd$ ?Tf"fφ8*xr%^Ҏ(e̖,5'T}mxZ=E/F^$qEna0'a_BQSN!?<')gOH<"Ѝ9ly3yz^kMOt{+ː7QV0>l#B}H/iT}(OΪ0O6P>y]%twjl_2)xdZ7w7Nww+R[[,Dr?LJzxmTi$.%?a7.iOkN'kW~ (_e3D6/T]mhI* M!.!Fܾ79r$oxK?;>$xRR]neqV3!f[7cmfů٭9Q> mgoB8HT5E2mh b9#9ozE}ҙRxonˊ9Y,Fbx@7/OZD]j̻ĝ\DžiG\ޱ̌1 T@c1/0km86e'b6wФ^4/ddPMd{a>lݙo.=ş(?>9Au!S PX^]$52[95vU ĵ"A+Biь3s]T^;8Z1Fh&nTTa1$!ģ^+2ɤ YVİ Y`.>d1|f .2%Jl0K 4T=xԤzT[8)ۣlϣIӇ0rGM3=fz6a}oP?|u#p'< CX 『@k' ABa !~s#uگSH6͜j@׹|į;E 1u YTou GfRigrڲ QB&\Ly]`@ s <1R:T{n :6ĭ>$*x.Ts5xT eݝЕ">*J/6}Pm˖> nW,&Wq>%1Y Z9ٕ c%4ߟkI\DOCvd1>&TE~S=嘚 -g_|C3 ^Q6ȳ.1"ll$Kb㓰xN" Z8]ѻ B+V muƣ8c" C)ވV>:f&P@ ~] ϸF(R5v//P``XQ @|>CAzPn_,\|-rNp/pBWAt*V#ۍ7}H'pBg" aW<1(:L4/65ГdžOЧ 2`@3:ۨ;!yް"g3<BnB0Yi=R‡@Lb( έ,;AAd %o'2ju!s<={.tZRsV.f&FUNv1ܓ|p`> 8AMhRꉦ\Rɶeokr~ca"@A~ ӨF՜T#2`@“i~7@t(VXL7&n=i]z]pXŽ3W}|, }g y 7A ҁ) < "J,aR0DHLT@[ꢤQ  zyn(DĨXD$>jjw~!S PunZ~R鳄zI>K2?9m>ku7{dH:yfOϣon 14Pȇά3&0=O5i]/" 먿eruBtEClH.Ƽt&,(]<7%sO ] D"igPա "]OΎ8U0=s]6PDFvzZ"0oTAB\qvzW̱q fHK+0zqŰtGNP@E:2%^5s]8!~-%N,%NL'@D8qĉJdܳoܿt=|^c?Fڔ/yKs1_w݇_^~}z߽yxͫ>͘UMwR=e +ng Fp$dcr7SDl9&1R,Dwq@r$=&KXaHgvO&&ڕ|$z8:D#?<ɐnZ0&5ޑ`OS ~2;zyfqrWc@üHVb9N#;IEh <bN&`מ 8(Eq@l [CnJ]#!cibWPKt PNNW L( +ugaOfG*]SRB- jHYjl *EK;"La9uU$3Ȯ*A'NN ,KҶHt9;ˣ*3kuҘEPtWAdvzh.+rF/ _sA3&@tB&( (0Q0kB63dk4j Bێɠ{Q)rnah鐆n8#yؘ̒ kgl%7yqflN3sT\F8=9& BnBmm(4"wJJzc-g$zK֡43j򻧐$ Zu<P}1 kށ!p kufxU1,\i%IF cPr!n05qEvLD< J :^BBJY ,z.퓌E(Ro8)c,$++'j9Ȓ2!UAUC:~Lx™Z~Rwhv..0䧰uޚ1"'?jͩƗ0PW$2&3 Vw@R%xF}cP6tD3yh0&bL;u֟e= \ 4Ovd^zMN^\( ~KG5%KgDxXbD̩?Mx* c3>}>Fjc7ƤVbIڊG<9ϸ_j%}sS?+9bh i'rtkhWs4 ˓s ݼx-%i)eMƘa Y8'hPyJa+ĢWl5<Ԡ2#9/d5.(L+ 6E8YxD&e1s"ur\&Jt%Ξ^BiX+SlC>X\^2n_w?Jrbbʼų[fcV :Tb3%Q"b}DO}6΂'Axv%HQQ pڍ[ae(}uWKM)R(ގ:\6 *ҼQQC}?;4C D ѧNbY$$Z7Tj&b"[ ٫)= ЇAʮVvtްhW(þB(jY_zdʸ,!2kAժΔH? ?І2a$AZ볧rܙk -<{ *a&rEؘ!M~ >u"WQ^)SV𒓶b i=uH=l + s4Gc ĒR" f]h J9|$"Go4ލ[ s,|Y Bdbf >pӢU3,ڢʸnd% Ak0zm .A%%R9pڙ!ġ3é1˙p*j[ t蝹#UDxiޒ#pt1^1fT|RS3)0 SFBOvh6{Gc2Ds6Td=Hff3գ|v8-VбJtŠbt`⣙ $^yk*/u[q]=JLnQ2Ac#wx?FHUu::ba }? )!$L"6GR`s<^MnP8H+[+@#JN/q73|r1 r?71J0S%h-n H-NR$խCeۥOqf@ۯ&%woo߽wX'{fNrs.3meT?EJ̜7F}ݍ5??#1,k U&q$%V$&VY]ǻ髟jا9pI/l)_M  Ō5PdMjc>,+)iR`]`'(HexHۙϥo ?Lh`a' I Gc{f i¾3ۜAnAɲ~(Kp>6J{5- s TbLڣEFd˒Ja`UGQh!OVS 5># oQS1%;_PnS6{yW\ДOTݦJmRS1jDz  MT/_H e"Ju&m;I5OT'_`JC{lkYOl{f|-gdD9E?~^Ԁ~A%Iiե +cIKdrj:m]56AHۼ-eA'lD(Z"}lj b'ӦXb i("\l0`N ju([ROtYNcIvgӒ(]pyȱZt _?dUAn"[e]՚EZ0gN2mln6L+֗jk$dz(1Q.L' 'ee\%sEي(D&<> 5SJVAӷ-ZV .m8Eϼ"4d۫cJNHVuƜH,+Ka,z[؏Td:qj'__`G~:XS#nhTg(6E, KWT"iK<]Yi%t6 z:Bä́(jk\gr3d:KE3:կzFm~&к EYzI :W/g]XV45]W_T)"aQ(3q̈"8ǖt[¸bWÖto>f7X;l:Z@{L;tMXtJ# j(33nXI1RY*T հ6;qs)Sd3zXq0[t K)ٕb6S's:-W\:*<;.h I =BuyHJ7*O9Pcqeפ',suȦsfNj8#Vꆉ:2 FEveb[ƨY-t=F4ai.>M >-Bjܘy4L9eK9k<-j-#CpbƴsT-pXl&]\vq ǩT&[VLKLo&B:1E0zkrؙr^ Fe)n6 [1r^GG=Le2iOnA_BJR{V=JW:)?D $Jڊ>$ p;k6iy.J2M<]/mf"8fϝoևcud܂MS8Xaw2PSjh:kf|kؐÀY8SˢpzJbV`bÄfC0O%$qt5O&8SlmMpp{=6ދ>d 86RlJVioLrO@CZoC^ZNƿ2sp,g`$%\iHc ^.c"w%/6{9T6?vV*W\ KRT@KrQ҇KTBSK n/}wubZ.@pӬkv?cKu턊Ԑ8Pn;pΆ#NCAFk&JsIL1)&}2DnNX#s49{VƱH6ij|{x~ 6eL~r^!p̶Z +^pRX[85C2̖ D+U< #GN3~W$]Ψs`-IC&:Af#kAˎ r@)ۉ湻UZS'ʹ'dZRZkzpTX^sY#ǘkCXku'Z=|⌌7لajC5ی2@FR%nLڴhٷv_|/Rd$<9G!SX (SPԾPmisn1[u:^ʽNGmao?x_{W0yߜcڦ9昬4OyE:^iV1:Dx{K/޼y_/޼|z3rNI'Q̡+;ZP8hߤN$-7d\7Ą[MtʸV~eWPNN #JIjD&b{p܎c'Vh@묛 OS?xlܭU:5V \1JRCOܼdeB&'833k~: ab>o?znp^C^S"Bh AWm=H i6eKG6A.PH''2j"pP``Q`Z$1aB6B1SLzgZ5dI>xr/Jy2Jn7㜶e<7D4l(@pb^i@`+|\(׫0(X큗 ZA'3G90 f9;ўwIY3$UrZOr'5Ra @40YKOvME^WKe&#rfmˆؘCmk뜵YS:5ܗUhln㲧,:336ft"+<H@p 0HTY2l8CNsXz]Sؙ^ :\HNMy,j, §c]iB jFkdu$@T O2C˨;l@6T gңm-e~:0 ۖǙL q9tL:O}ua[V貁IpyCmb>B0_ ~)8O kG18N/Hei>TitmU-ȤE~=ͤV3ˉn @By_T8PJ{6qdJ[$vgXMixj 9Yk1 odXuͪRXuIfDH\ά *x}V^OҌY8f.yg!z,}sc L3M =4Вkj{C30Gb%9igiW: K'/߽^4,2ŸҒ w${yWzwZ~ۀfn2>Ll'G*~vdo޻\&ۀ<)ɐ<%] 6=qnDȴMFAl)ZwI|a2`k4t8P[k~I.JhW@8=knuv^^\m> ID:@v:vZo2:q8,Ĺpdis*ȕ^m9+Ϸf,L-@sM+[[zg.wUs+;6ʁt_y8\cKŶƖeM ֽX4 Ek<+uCiaVeHIR+W;9,VЉ Dk:bmvռh&@]17Mf c IuΦښjck&]N׻fSյJU["Օlcu2l[RGxmWvy2frx]:]gC+ߧ-`ymmAnM֖ph12B[Ep2ꝫck}&sWhK|X#:)~P,p:c\L6)-!us2;gYgGAص WN}֠MJCqVw_ؖ%`2Ȑ ,^+R*dn偓u4R3_QV˦a/qaQzWNivljW,1pRr, 7)%j eWc\m$bq=L^!v\Aq%BBy Pm[RMj:]R/bj ؒ6hÕ2' ɢ(@֜{)1[- \bSVg#:%\+魷R-](,6p^IpnRK•3vq,ZvXmYڪYdW_lBZ%h9u{2ɻ( -%Oۚ%nN͒f)՜"t+pYڮs)b ٍ&Ҩ}ɔ,7't|n\i>BzTntv:iy57Eot%|ٝMzSק;٤?ayA8i Et8_4 ]OiUٞ;IզM0tDŽ_I` N!.kS5g0e=-Öi>55l}M5_O;yx| ȧeHDgCAi7_>>2}2o4&̸Ptg-keJ&8bMQzǓCa*g i~uZ噮8|7n|e,vGF!edgӛ`|C<`z@p,/`i lD,*?F!³ΎBtiQ]}C"ӐdXTN6P/G 2Nz߸O,:kmҴ=`v*G&;wj̲p4IXZ:3elڅtC]+ܵߵB㔅t3\`fk>" 𡒅1mOa+:dASV4m12Og: ԣua3CSƟ-0]"# D';Gϓ$j[ܧj_NF"2GK9;THB!o B]$ZͥGCJv@5r)|/ #SpI2#^TG0x$Mb% ,:ttC9ȉ|҂z!GVߵT*lK+T4)Ko2/Ne$%]>iC$fZ" :E9RUE$Wv`4;_"c Bji̪69V"pxT4#30 b)l.M6TuDCV|QmL/:w d]H~W Ņ51HcQLqz4c>+Uv }dVOe#4uw/fPqD+J[DE~YX5&"##f '.*Aπ]FhcZ.05БCGrβ24~Q 4rYI& +d9@G#iopAcE2gXՀ78dQyׇ&c"0 p!`p3II[ OϷNC]~>S+(UF<:w>~Bh|[v`ޓAp-*~[M|K ؃=s̡vD:GC\t`ezH^AFIV GfXW Gi]?{|ǿ/LJ;.z~LJ;  NړK2f]"qT~,]*<e^es~\ _j"IB.2 }"t\Q#sCpt30E-%/Ii/p> 5vpYC:gvIG|7hJC,3s{EZ 2Khs>.r2\Zy=Xy* )-_Ջe3r;IbMTͲ~,GtMgfS,fZvfap5 45_q`WGׂ!{}orbClh<+qxi|$::[Rղk*ס=]u Sy Li:D:۲ ^_θ!;6qzZ^ Q.Gz [ZT^zȲx"{1 عliT3 7gPdAq=9yClL4R ' ! OFG9)";̊﮹^ Q3&T3+5cK@#[!'^+k@l0~wGwiK#Z(hU;AqD13Z7;Tk8OB#ztLFcDaW_ Kd]Y&H594\ WE8#YS|'Xc:GA\Nu؂qK^ne{EUdVE"hN̹ΙgkzJ]ې#!Ғ@$`JQYqJ%DouS")BNKe6tlxPy]i3̿F|L,̹8xxaAH\+dPcyܶC$8TN?},U[.|7r8|S fA@_|/Su|oK 1?t#BәHZb0,[Й 2|-p>iY+ZUwyL p& f{)ƒzXvDO|B}KO+aMm6TĖ)_C,sy[z(u{0|W=]_(Ob=S^D9_/ ,[]7leϻ:(pmy7׸Q4 j8RFdOk;ŚӋR9rdky_gnHUzOݘ6T >@kȳ9eiӀ ϳnab6916JZF&͍3D$DC9责dgkG0آѮߖ =o%q27#DZ1~wm1~(.noN[oQnOh(=g~@ 9e.'P3ߜk2m [(j'rv D F~Nx!PᕔmBWI [a~Hc3˜*jpԟaT^LY%:X Xr|{z 2s#PN/qq$gb %_'L n>]o&a'SN|;+Ćx_?m.>>Η/v{5m?z{4 , 'pۏwo6뗚!~t4%'; WJ)=j`@1LDfZAryCTbD2 Z_PlMQş$70+|&nQ׹V PQ ~]bIn^ц,C&'wMR/]5TnMn &dLH|M҆s..!a0j9)*K9!8n<"^̮ v|F $[G\Y׊HNO^7T]e9gDRKee=%/|X 1FŚaxsAXRdFɒPZMѻ!ϗ.a9U0j4~hI{V[jYji9qOQUwȅ)8!OrLl`dh7]<~ [60zb2Nxx( O'9y:)W8}K*]>EN'mUtU <=^Zu"a.jae7hd BQ__,nbr~IDUYX.x6\Ț4F2 ƴFA}WP*%l`b0P35|pR T""e IRtZZXj}gW{AcL.[ 3R0hP>uaPE5_T{LPDե`&QEmߖvYHϡX^]6)"+.W 2>y w \J|P`UU1Šqt ⌔'/H8Ʋ5Cbg9HqVǪ\ E jɍT=t]ZcezD,""H7.˝nCӪbqB|TI\IA~%-OTfOU}۵TpyF^4e[k{Uk5<TQ /o0҃WlP=0i3"vni7K |=WeLo%7Œ)/YVœ4z~\mR$ʽ1vPƕv8PN#*ox]S)nrAC5 ڢfu)0]DJۋT V-`)@,ǽB>w:UYu}vzTcӵzJ A({o~ӁyKt@GCoچ)gxՏG/|~">{ᳲ~xm=ߏ>B角P="We`GN4FNp\+zOגDfbdhR'YءV X} [=wCl Q ZTY##ƼAުob#MƐpF,J:ޣk^DKBuTKdt `ڃ=}z4@zShX<$)L%EM=hKtg%@+ M8l(l:J<ƈ|VLy.g9ttzm(bxkⶄh(dWJ*i=rЌ$["z&οrj[1p(KQ5$lTU+1,3TFG'Q%7O$Ev(Z8Ny, vԬ>'jSERBRZ 9y ş9Ԙ2SFxA 3]]=ȳ)UE"-hʌa}AV F%Mps.rƍуV5\fzХ[~/XaҮu0:gadp'MwW4 ϙBbY(qs}a0Dmk72b.!)k)S+vz iٹ}e$|Jʘo)2S~w0/´);V\\|`aB*cV%|DZ; ӟgTXaGS[trv*zzU7.Ԁ~VKu( мGv̈D OPb*AЗ' )`EbPۧHz|׹5.IS֟_n~۷??o޾z50m_GQ)Smj/Pbyr0vedمA\Sr9<@33AEIF+@4j[8Hma?ZLdSyP3:yEEM8 nRi;i%]=a4%M mJgIaY)VPƪb8c6*t݌5e,dhdVyX8r$LK(6xÄV(B}+4Td{es&mC:ZE LǵnkcG.[J aJnH(6ZF5 d9';=mQ|+(MZn49(WC^0񲨢`Q,ު%E*8ʫ;9C2%{5,I/FÉf7JXc;+GWScZ_uIAO9/Keiim)̓~ޥ :Mo%Puk=[?6d{m=ݭK5dJEӅ\4}|aߡ(#YE4Vs3P`NfI]+2=cep 'U4V~FbJp)k++E 8)[N '+lHS]n> +YZSNkI[󞅾˻ x2iZVQuzj, j5G2U1NBqt:ظ cX!2SՀN FZUz7`[t`#L@3YK7)E+6ɞ\[_`GhO>⮟ v?i؝sB}_0"@fMQ^mvWMiqA@j[ެiM)ۗu_3>;>mmyE NðnMϪt#\2<.3^7eK`o(j,L#*b5ړ"Rpcsq9 |<*ht'zQ"n.6e l!sZ7%.A*evF$dmQmvxzxȁ˳>,ǩ,mu`y wc YQAP"pqv\Ap-FsR͝G%F= s\xf!9d]9<Âx۷[/SAHfD;>:@BtXrCrVE²ݾᥱ2-Uy\幬 (=] c^bC-"v" XFdsyu! h`Z4y_罁7~i{'t#]gwm7rj[x۹Zힵ2j8S.b*Jƒ6Tqimv(`fSQUv1qE7Ht$$W0]]Cnw'[54pUuXY?܎y4.D LSAȮ`hڧ4=b Ћmc`:oڙ gk;UoaO{nc-V1vC1X1";:|3JS1Jycj ѨMF3D|&.>[|&@Rvڥ!uߐHY S;ot98zYD\y>'@Y\B/kFJ=lXL=Qp%ni[)^V^Tp0R>90bw%89XpIåҀD\.qyY!# xΆM<8 {ZDk*:lzh^^]wdu0{0T?}ha)ڰÈ1Ħ(TGq4BԵ׊WL<)HY=wd,z{~Ŵ+< U`\i'䀾d釞df>ZUQ4E˃1XY17V@NYke(Zv`[Ox`'5kCΰGtZF- Ӫ9j2bEaq uJHk,ݍQhመ>|I4҂aKf2KD@bI hM& }W܋i%P0 @kvŽdiK ?zt\C^1j!-g쯏,wᑤ嘏'P+:MH'`:w0] 5aOUAۮjQ]3j s ~A#)̚6GmpC[72y7xPF#TCv7:˂b]Ld]̅x%Q pd-p9޷;<eԸsQŽ}/9l@EZ;>˳% ;ɉ܇y5Q0rjT!ۛ nЭr8qȽh4lwoZ@nC=D=2[E& or1 T'֘FaY-a!kmR*PAf-+a;l9u2.mF/a h⫍i" u<K#hfKsⷽ^"4Lg4la*[Ʉ@}MS Ӻ1b }Ge+8?^ L Hg",N .DߜUԫ,am}t|mCe<"r g6]-`".kySaq滋 z74ZޠZKJbʶћLg^T{*#aIڲLCkKP|kb杬qB$ioNZF BgWڲi90w+^|:)iB]cCImDnܑ@(:v9ȍG|+$ƣtRýҗsGqmZӇFZ8aٶ@:ug2T K |7\ڐL zXD|Aa 앖u.Dcz bGH s Ux{ , A<>uDGL U5 R[qꊮ6l,\϶ q~iD^BRZ-ϒI\zL&0l.oq'*D1&f4wCIi$kݥ@&k Qk){SgV]z6G[vgk_W?SC2Nqс095uQoQ7p1iS8\H߲ͣªS@in5SUMEDj(irOR} ~$sC<85S 4mbQERHGbD:M8 Xja wqYhaW_*Xf'gj %Jev8<ؔ9=ٕ `/l%E'Uux8)~5#ф1*XX͛Ti<{к;Ԗ!Bte } AHhXg~zo>{~~իO޾~'ݧӏo~}{wuϛη'\4}ûW7~LO/o޾zuKW񲵗}>|zwo=?=dLvK[)I|R4HfD\'[(6ѷO-|#V;oX(;ki VAb+QC==KpyX_h-eqě||x3 UTgI .l9keqiqQƒ') &x% 棗i:(ĜhTeV5kaCpaB0m@;$瞥h+\zYkLX0:+Y}c~x4aoGE Q5Z9wJ+BQhy)UIFA2҃3`-z Xzkك++0W?|5sóM)_^ Bi`%sC)t` O؜U7WW͢@pUQ _6Rݾ,ӽ,Sؔ^jb'ߨ_pdj#o9^[WN: 0R +r;(rj*aVbp%kAJ1 ,+\qа!!!Iԥ2IlB >t/4Oκ9AEBol1 7! } LfSV% I@H )lQԑH"4o5l\HA"&mƭ ; W pMh?Tjo/va@^=wa4ܜlxyo0vܪL]zdUrgfЦ7h`n}!!ChM%1py]y|S"%A'%U)jҬR,.iq7D,A>7D "[{qyg{0+B%d8`Yf$MJYWS4LD[#D-7%#(3DؒbyNO3Abs8UQQE9hHg_/ߴ>X,{<}O?Ŷ}^,Vl r\w-x gB-hړ0%5C٥t|(ULKUMKMpXs"rcM}fWrlݢ۸,-:<2 I(CS,F#fzW} `O$> 4Di*k cZaQ3A j&He<mC/ cej)yVM f,;P3ƏZ!w§ԮgP졘oN֓<$j*NQwܷ,b/#zS=#oCzZI Gim2q;~ڣ l68ל xsLTwM7($-! Ef:Cݲ x=;OY0Q!PJfH1*xЫ MMw;eF(-Xy8JLXS_j^Ǒ,Cx'깂6b3XSlc=\"cQK0枨m2*dBxG7uXu6do zRM 9>1Am^@*Zš ` % cq~-BAo xso0oBN1퓱2mcIՒ[d2Z$foUenlT0rZm6}&2Xf>p(^gB(Ldd&pL.@@Ja C_xͥvɊRM}ÊY6q8̆0*o?WO7dX[O)}@}+uo_s?ۏϋg{ %Z{Wͣ.o걽o~eziA$؇r@RdTrP9ٻ^P}M EXx|*HئDɂYltlː%2Ũ7(G+W.Ϥk/x GT&,>6(<Ik}x(;$\t8@",5$*3/OVd_DZH x$BW;*1Z ͽV܌7Aȼĥ&i1)o)5N9WFӶ&%[@#@v`dWOE(좨A*hpZ*Q*cz2O0 'A{$V9\hz-x=J?6,HrK)H9 Q43v%u"p`W;| օEpl]Q ̃Ku"X0ɦH; N"K+PG~w) R̃а2QRjn+hddQIv^QIAΗI !aJY҆uZ+[ea/3|) `{D6J9CNbca ," $fl%duE G VEН@ T HTl!+{@-,jsfblь h $ nU"0.!h=-fCvut1Z*[KU͒) G_@ZVB1KJR)rt ȿRf~٩D#Ҳ;Y Xl[4( ilb+Fo\M (m2j8b M&DږwЎ>8ץoRmZtU%䃗V+WjfRQ6CGdUw0KFUXоA"sYy8 D8+SK,bZQ 8zrC@%l=X$,Rդjn1qsaeĢR-@ZQEl-Jc*hVmieK\KPD.YR(q1'y֔92㱎"FQ̓\n("Bl/9 {YR${ْJO`j;C,}+.ڰw BWHQ>qug)=l-u:KB3v if"?`&u'fz=O^$=sXƦjE]%{Iˋx-ˏ__ ~pqqJ.+,J.ާp9\F8c9=X) 'u#= En{ vOb73\^nX}*̍?sۣ8і6sŹF,EJq8sB]{oc59΃yy?[T_ _\P'[˽زs#;N[=Bz0>KO^@GظKb_QQnQnMO3aqGr\rl|OhYnV \T]#7¸5gw C928MP9p6-SU,MsGP3 Q3HgΞclRg^3M%eC6}QmնG!s0"Y67!G|<x U5 l7<'~75B Fp*AL9t}lsL[PІ S۷3Xep0Ӳ϶kq0fR3ͻf~Lm6]4E'(Ѣy](mF? #b@cQ, G[IMDu9=* ! {[k9pk AkS'KZI#86zO:Y{u? azqO foׯzԟ Sx{0yu{ᷫ77׷p>{G߾J1jh& ?XI5O3LJ}So%c׍mnƖ=t49!K=.+}"!Fv*]IGz؈oLF웜Yp Ra; ;i 7n[Um~aG׋R]!{T3#?K'}JfCƾ-!U=;OU=nb7vybeos؀6tnQk6*3i5^vqM;x~r`P)+]4Ѓ4T!5jA0ƾf]9KBzح&CpdBm{ ~ݶI53 2FdžWCXx 搤2kjw1.m 5fxV`ni{{Lt* XjbB,aQ\kB,]tS۱)]?] mt-*KlkH3&[2pdз5tB=IS8[Ꞻ)\o,R7Q唪6KʈZ.!Ff˷d- y^)7ZBn/-afBNsvT+LgѺb NZJbuHPD ~ԩw㞈M3oM'XUJNˑ`W2o`@#8\WkH5&1{bV݅,7,nmYShὝVPP] @(VNXoJSL`a2+%%' seť뮳$ef.  =.sS7(yLƜЬfm1Bc_:jz~bR@sP#˭}щU'gAgj4kbxh e5Ǡw-;YYF(| K؅pC>ť6gJ癞 TJ V<0S5Nu#!Vc}`5 !0?Ab)f¡2ہڜXv`v!kX2fow;5z&+s{BϼY*ycǓS.S>s#WٶbJ SdUNaf w M*YeAa]#*&^ŎV~.{bJ(vkۜdΩw9&ѐB3m$)nVAW^@WtEhhuwo{\ǿ#WWS\E O7B]Cg3 Wyq=ſn>z__7n_^Ϗtԥ<NL0HX7',6}isa968}tW0+b<2;/Zj rz5֊äVz XY+&W-ۓqI,EpoZCrb Y(@v̵g n6-_0 M&!aU3GmziniFDkJROv,l!~ 'Z͗l~`xn ɋnG^'$cĊo-%阰G€gĄܻrѓeסxA}]-@yzHl33t (H:.&š`}}pj*RdGN'6ղCK) =;਽ιzX lo2XY D0m\5c]V$a'שMt}E/ۆr\p%GMi2bAG'`i"w2wbixٹ*0O.n;"%YqR_K4`(3sRӶ „&f,ZIW%D :`4<+h+ zrybu`)+ L5)DiXb@k(Xn E{yA%u6a g5,HƴHM\l![qPONw,:?DI-yz] д3u,%< @ m3Ŕ_ Y=swV+dg!%1{{| <*QN)ƚټ qAf $ =& dY;]^YfЧe50"i밴~=ղ-NmB!SIo=\xLh 6r4.MS`"?t9?8BC']koǑlj} ʲb#LL@ q`?~{z$;G"K̝WΩppt9!yyŧ7zןwח7w_}~YL2߽}bo׽yj_v~ٳgLS(?<t~߷woϿ~??p}wMۻK7WW7w_o.~{ws֦{̷_]w^tuwoopw|C//?]>˷_j>yw/[o^ӭO^_>:|W/zxw{UW__^'uv W`;ϜȾ|cV[u/싏l/S;:KC~94vo =Y`>x@}i>Y볩}L/>.ryX߇N'ЇNt~ ^]m3h11;ܑ 9YewC ~Yo"zYҢЇi3lmg,|Y|Y]Ҕ[-R=aj=ON#M*Bۻ~G*mVnԉ"L0Y"KMSiaP3Bnpf,va"I%qCC!DɊ paZn8v;~>L8ٯεxӡ-7]ꄝbˀ__7F$Sҋ-D71u:Y\SǟFLO!hثG>UPc> ~`NHcvtb6)[x{ZtPt~Q C\pr:|#6\@\٢5ieۖ`+&J6eMe z„Q=-4LpqxDž=U]f &\>|ҖIzJβ]&Rʼn;"&a- Ul讳 Gd1'[Uk郌*¼bn:2A;fi[d̥>O1dڹ=.k*{^lnw݌N=;3;ht[Eb$:NhLò26Ɏ1i&{{5{y7*G:P`ofg:̪`d9$^=WO-,oQLuȎ 5BR/m0, ɖ'üOͤpafv*1d %Vγt,!}:JӶA8(c`X[Citg%..X@q5D[<$0 -O SLJ§<1,/!LO !%WpUM@)-OF{<"omesKtR8a@`tDGMvvwb0a5E`([̤„F`菿29{gE1f5Z `f5H,=ߎ:mXGfht=uyc$D3q!8a&Ry펏oDtoG.ǧPgMK^֘%A! HQcp'7. b۠’ GNle'P[94Ix4D 7ta͞G`$ +XmN ޵ayIV0{2E=0Qدc20,%,釀2my"RE t ܠmXF4z9#%xرWgFƞ{a{([ c83Iiv0OZZ%[֞@7ی3@t$PSkb>pUɰ9[rMP=*5rAstg2=ր5ZD GdlCd40n(S 2h-T?t>Lq>_uQFK'`$4nmPC$\g)Rɐ&zi8ցunvXY@(hv؇!EVNNѤZqSK0LG|pCIZߒaڱC4aWz5vHl@TgVMLaV. a`VB:0IIjg$Zz!0@H^pSDc<),3.NI_34ŅAA~sDk]?yZeҖIJ$,`y5V5b<,q˛\N(x]*c  ی٠cG+k~ C.ٰXcK19X+-?nH0,ffVoPgE\)9ԋ:xZ4#@=V{9:,l@%;{%~` 0|%gh8̢ l0h.(8iL),ۢ::ϛUfhp>ȱPѲX'lEQJ[Qh%\%DuU /p9d(k; HJhxy6CVbiϭ˺ji&Po󘋭sdAehhŸ]]'gO^>y????ۆ?[Ɵ_s./?{~7FWT{^>DxYh#ˏ\w\p?!3x|Y93GIvjhұϼIUB2W2f\w5V8}Lfv1VY9x maV; Y[zRw n +=#+f[:~-wII8<ըB8 E5zY2[]2Eg2(2S "Ҋ(DՀ |݌BnA5 dG;3N Kᢅ\W$ӕ4 .`RKrnfDgEǗNH Vd:1:(Fo,7ޱ. tI wkeHVx9a]_ (fm MШ{XvXKRfu臰l f`-QξTDoY>tep6AIg1hLVAh/;L[ْ0])*3 FCW=jG M[q RxV#¡uky"Y-;iBxK:ߍ0@MsjTgRT`jlt 8VC}>aG - GvG"#5(1sgNjrḸ;9TԱ.v;I^y£HrT4+jbiuhYTL9f6PoF05u5Tٙzmձ(3vj:L\A'H`*v*0I Up&/Ũ3,XDL'y8e4yH 3kH.,ۣdATג(875۲>.¥4bTg G=bO-٨ltX0\A0H6vdk2&ZB E}Z[Xj/ ]<* zbTcshަզ(eL0kv`c~rBڷW_zv!Ec$m?gwn~׿zjh~dqHxm3|5t:ʈ2eh ingn5$+-xdNēIڂ.i̸Ӄ1@'XAƐz,iVx:d*.ܹW[Y) W:a}J`gx5|>*;v/m+0ƩmG JMWK96|"?Ÿ\ xf~Zמv#=ÚGNJi]#JR S'[@ 4M^h#uRݠYMZLtk۫Yn-Rn }?ǝLN sNr'!^97bL?=ML Hjz9?U 3 :|aQ&޹JH"5Pڦ"(|ֺA_c$c?$e#4`^2, uܑ]75H<t:פ 0ZkXy喀^;IÄ DY ֳ2b]z´-І:Ocp{T.\!h }(JZiV?4٤Gb(hmFapokh( l%ܣYjyГ Oh~ցQWJ迂`zO=(Y(+|Qh0@O1a{k呵 ^I>p D،wUvtު7K#m[A[Ⱥ:NT6bZM;qP+8Y9o䤌\̧_|Y⪦wMhQpT&IE7|X|rctd] C ^#!4_p]:g;%bX]caG)~T4 L8:ȳ'.#t PQR(qPҁy ZڳmKuOSi\TMu$*=|4EA]w+ ~Q藿;   oעԭ e9fܽzoY km>'jyRIn.?w;0Ϣw:"U^Vڬ ˔Gѹ7WAm+.4<װR< 2sՊ+q,ZbYl ]X4%olivmp)烀c]aN[9Y`9􆨫c8^~+Z!K|(Egų5KlӶ&c(lt/ֿ -닣J)JiEn%Dsɓ>.([X\ to:uV,*Q7u!$F9e|K oĵ}=`ܞfضI˶E񹗅|H fi sw6fyv1P{9 _rgo.K<}aqt矝zFw'f8f2<ZF1`p (s3;i/n(bHORK`;"#tyDpz#֒<Ƴ+9; ɀO}^ ۼp CK1#>\IMG}^,1MtFcS ;K9>%{{0Usr)-hz4ZE Z:<BC(]r})pGqUYV\;IU㰆TǩTKؓ}e4'ORNzJsO"_g<{R)ްVv 7r7' Ca0',yRtV(]NN>%~nPN._w6R'V-iZ*u!E :<ݜVxH Þ..~(fm8UVq -ra=3*EH6`Y Fe¦C {dj:"UXn%2ߐY'Ax~fv #i"[ kE֗zR6bFg©\²<(}#^ZP>'pUȶ$OP4i)%CŪVfP$Z5a1hDDND2HN֜q715a"IE;!" K*m͚F`aiu'(Tb2[T_^h p.[Yty*ig̼3{ד>v֒⇲BhnyT$$Sr}г&ʉmNv!ir"@yt /6_]ע ƙ&Wn=\3T^f5kӒ~jhb7 iK=/M9ͰV`FKDS@%*t6Xz&ɍ4Y t-ǛZ ^3a[$aլG? yE:Κ) xɍ$RVͨfg|$ lZbİ.9jd s 1fȿ `-OEFb0Y'GS > k&t83s^CdxBb>Y"YyQz33A{'#Bk06tlY7ohj1lsG(:__Z'/{ n+1cX?ALh!!$cGųtZLy9a.xɾ&I8BNN9N/wmH>a:f%?r*,ŒlD@ζ@@)ʌ:4 #89VY$b5:\J)Vew -dDI!2n _$0"}5^1IE) (q^'˗ a ȩϹcn:U)I0wPDe1L5K7˗CVX_SI LLr]ي)n@K~" $#@-ҏ5Lz1/[R'P.6JaS V[|%"l-a+ڛJ z[ވJ*ojͮR]_4s@*;IMQ%BZcJ- 9taabɓ1Y]ڧQ WDї18GVo()h;?x8}IASr ڦ f.-.?\\o>>?y.0Wϵmϴ |o'ggA f.\O^,:fo#I]lsEYS&"RGTQF]$ !#(x&5j$ӊ>*&hdhK9L|NUrD"}X@yY*dJb:U= P)';:'E`m3zQkMm}04RۆY V%5[qnt%Z 7$53oI: fDkdˬ,f)W*TQZKRTvptJ*upX fe A;HQ4g-ɔj; ߁ңit8pߔu"$swtѺu9X.BİB4!D3Dκ>"q*g!Ntg(2)k̭xjpUS'9-H<@7{CW3-vl1lo䉾FMhS]!T\';ͻ1 Q%{7eGM]Ʊ# Qk`@ρW@js?iԩ2.g_,:-qՄ#oAN.$3i$:.^ %˵,r2tliT~6MZD0X {Y&!oTUjԦB(z A_t$/<_.WNk*j/aދ7|KhZ\LiI4ZMhɈBќÜ"j)=sB4Z>"Ys\zM)#T:oЭ\q:_cVM&qӨ)B/se抢9qET1`zR#_^tj7n#/MuZ) =3(|Zs&?8,.&e02ؐL]Ht EѺTcXUQ?Vf b?%f Xr9( _Zԩ<[(VWbwgoƩ7ʩ5}7ԲY싯tWᏞK!s\os}Oo~pyetE>s@w#4Dzlwr\&nz0cE6ooer.n/ҬJA\_{D ,93`gEPm[#m;ଉCFm/h:a͠>`Z/C]tCP.KeT'K*{'Se8_@CMg 8DfczҭT% l[Ԭ 4\-gQd@} e6Uޞ}R5[(&ӎ 8x<rjs=7ˤسbRw򋐕v9MT.Օ W) 8.%D VTqȕGtdQrudw*uh]iX?mRq$ LR3б%1"ed[)1:OhhE}U`&$If ac&G%  vVdX&RS"40 Ro(nd|";M.mSZ|iN6C8#z~MˆfElo]RT`)fMZ.rHM=`}[:HR1q!O‗Mlٓ=Az9C&1U!&#HjgCBu=hn@CJ,$>\"ya8s6(Aģ\aʔD |TBSښ9<2MHN,WAC&)õ:3 ^$Yk ,&4A%\55L$ Srtʱpm‰HhafC1pPVZo W-H奛^^ Q?\}䈝4~>znVcgVkٽ s sOO2k'͆&R\ԐBCwgrsJWwxMF)wV\MiՌ\B*`^|LLqP chD͒0.vpTĞ˭a%nb릦U #K?CuHcHUVY[#z;)Tg#-ǣ =>NlbΥ@ws\,TOȬKJ+bX6X1N\ŒN&P]IJ× ! Kcwx|*w:(r;;֯l;U@9;1*NtZGK-T4Ufh[WXjJlKsjᚪz%HuN<>|`sh!x.%1Q\}d.Ŝ\> +2[^])*B[\ui0g2hD3%$ԛHLX]^9U GTLK`T3*7tE(_ U.%%P(KD' XW1?eJKFxˬNG$ (5I#%(1ϢAǛy8rGu.ٹoU?_ݼ{{imɟx?Ynz%+R5c{/*Jjh&^ޅV`Am ɨ8|m)\<E0ȈptZ Z`z)ܣ;SEcTRk3\v6&veSueiʹH4PZ瀣qpI<2C d;j௉{7# B71늢qcB߉h2 б&ohf#[?%B!TW2x*dv7[P&X&*U4-hX 4xޢX&I#<,tR42,`ƥ6 O(ӂ^/mr!P uIxZ8W (2A-o4Uz˕{Lh[yƐpO6O`36vvw0~(YC ’L!BKZaYܞ~1.%3M4bBQhr5j&?0`WJ'lO |4k8%"DS6K|EM1?@m4YRWYXzf5wF9U X`X`ct1:2jr2HAklZg9y.Ú&eler[KTiH Lp2Q[3Q%t 5"]#"5hmh!aAu*AbK ?R#l#/&sfP[aBly M(Mv6!uC1(SQQ, 8=Eغt9U"9u IT2Xea()f!~ptنjrH( JYsHz5EU~V쬻p_.t}ǿEop__|焫6*l߽M?9[4Wox)uLI"+ ZK ;Vus]$o_ 6WsYE^.m.gʏ-=rlV~lՉ\gju,;gkht-mgɶVuwu ZcDӞ1==SL}fԮ&twfV&XO=tzSd5vuNuyrR'PgW%ߓ+%oS~(0A8Uo+quJ!5rUN'EhTVRf YWDQD#=qcmWKB+M׹wTWp]S?ݽ^+dU{=Yzo[2f%;Z )]m-.5&sͶgt̷UI{Ɂ%K f(mglb95Sĵ'N-v8#ᐜj_NJ|vNyܡfᶵa8߯ŵ&;+:# Y7A(X2a hhũ|%ڑCk*;sj+ihn \1nhE;,+=gz(2v1DLinِdY35uV[bUm\`Uu,~ni[[?#"8tfiɃ$=Z|ULDᢺwRλU3䗊_t,n<-[v[;"sdS_+M%LG_):]8;*6ۑ}hn;X.͞>Y ]G5:mn[&'Yf5ne=ú?qRP=[wPn'4 w۸E%s#tGGvE4L-l2eWq%{l㮋:,ٱ!م{UrhCCwޏ3!n#Y'ITRn/ mDN89ar:LyO0)5>H* m Y5aO} 9_Nk߯8xdSuVn(lźfuS6#v1r`kD&P=QqXؽݽH #TzcxR3_Gφ|_m^0~l/P{yKsJv%_i(C]LsV.68ox4IlܳȍKy0;lĪ:k6MYCpg4ߗ SO1hU*ݱ,NϣVl|,\[1w6lŹ~Tv_skyh3>싫!FԼUt|z<˕GFQF0V»> )ڗ=8T7[6Z&׏Qrs}Ƹ1f:lI 6PdܪPGȔݙƭɫ$.V\K8<3~,tY˕QmkU׋ *N؝Ԡ@DۙKMT:D*϶Z}]KTn<֞u޵*ؙ-MpKL'7W U=eW'T݌h>>N{|'kY>UcsCfc4Dw#\8h6aw逬ϞW@$c/x!i;(B{!4 ;(ZLvT0(b9 xvG51&z@Gm~hg/V2tTO춴ǡjvZM_;dzՁ‚UtcLՏ2ʣstawah>*zͦ0>]?72PRE4zRHTmQ=РkϙudLs4@GR!^FM1{Pvqmj֣(BsnPv\Sd5uuMcw|Hx|[#E * 3ɛ8?Otv~rUMN}8_ڜЂa=GAdy([m;u:ңdjE$jQO 0?8෮fOOcXϵ&&W&QnY5xk~z{=]x̏'ll&>+c[ȩ ʗ)0[``bN%؁TS{vL3 ƃ8`|7ZL+3A*sOrAA<&M]n .FA?ʸ {d ^۶7ڋFM bڔFea'䌁M?/@7Lؠñ+Nnjŭ"(̎#`Yu|% \ 4Wt,|j5 -# OxAtjSA /Y 6UB9zC-lAnyyjހ˔'ڠᐑ ,bT䌎aKִ@Y83Ogfhь[x$ 2cxKxD!gj YyHjnr(iqөK7^"P-0D2sA.B{MH_GE:!`͔}(t}vڒ:l1T(Hܘ*BB1 [:Mw5~D˔GUI. :m%ed:[uP a?!i TRo("% ,5r`P~WID X IZp؁^^`&OwCg@SQg%zZCs=7U -ҡkKm8Y Lq p|RבQA3' tK#PFw7<i:,EASgAkaؕĆNu&@Ў\A+G9n.mfI(PnBq˱m?pR~.?Ƈcqx_W4<\ӄ|3<δoUS "ۧ IOU3qAO=njoAaaؤw\n\x^0llw.΅GHDG>r86ߜ 1(W1/Q{i+!cxBἽ|oiqYWΙLJwϕpƔx"%k`SM749 ?r7ﰣPJґ2+`xX/W΄;aƐ6L.@~E$PY\t2DLT`ߝ.CAw&r > )? }^G3a@z%[^|kmf%`j~4'9Y#OrSy!@H<1,V/" mxyOoq?-Cj`H ي^ &_U3 Hӛǁd9gLhJԯul鱞* ;I2&:~栱e+dg̬儝(&i6ٳ%C dcѱqPO9$:vS 8 $-2T3U=-*x>GN`O3۪]xh,\ϥ* ubB%",YJxE|)O^7╊+uvq#X̘GT^s\E,]mӑn/]h@jGT`:Pk#ZLd/Sm]lq@E&\}*8CE7{LXc~vzvEϗ_rod'&.R|_wO?חo^>Ku_LHݍǧ7ǫ6wՋOˇ;ٷOWϹe\Oo}x!w|Ӌ7?߽}xww>uyu_ůջD| 6(#S#d "^Cn>CsMal[cdy[ /8Pg)vy{n`7ܳQꉿΐ63I3g;IhZ2&rFfzgNnrDlBPnUnIRBe㴡Hvp?\HW$41q#Ht^PU[ &S0(ۺ;N{1OC-f]`=Uf'aZ(Hqu?7R`ӳ ,Ն eyCOH$nP/8TY\SH.䌾 wDRH?]r}{w^}I#*iH#/䫯.>\)_~G({_}w>|0zF"}_r%L(}x.e(VsU[;ʲ*ITjX 5|u/Vnt4dZ`$IIic{J*WZM骬TVAYJMY(8XK)6ޚ`}xcz}jMތi̫sߵ7b5DUA3Zm0Gl-adL;_el`ByEXD&i*+R')``C/BiܬNVȘU"\j^T:J[gY^@ H|2V4c7^:1GSwݜ!/3YtQ9Rh ‰C$P-s.ıH7K]QRZ`ˊ A َ5 &<%Lz_(b) H) UssK Tls5QeMU=y RwC[qftn㼒mxJ=vueFC_Xɮ`E 6 lYHvȻ4i$EgĪYaBT˻ZÃM*Nj< ;_*ʁ`C*E>j)$&BA+s @@54>ws'rpU,Y»aѸ-JW0BLa]&%kW8OXMHy)hm<qYMU۰bL#{[_{,^YRU" $WaR| xnׄI%TYmDOdIR_ &%aVmYtI,y֩`z $cka7^Z2=TY+vdfQ {:Bˆv*HhfcpG@LdڄeiZ<UCAA^ff#( d0lqoTѠg"^Or>*qof )~ @w XҞELT0k`(2ZLSs~r{QCpnt0 Wd:JMDP:a1bid sq8ea6pñh~M WTZg!f4҉$lqDyb&xO"E)u&9n0,ml`~]LABZ!U/!(o qEh[ܽUm0xvIM)VAT$  kQ44ӻ#yCp 8V<MX a_A5avsTk ;%T9а|{ Ƴa^.F =;~69_:O6{N3z>чt*T csB\z&Tthj#⅔miMMhJmzT]cmF2 LHYh1pڏMamm &UWŨ~D?OMiJ%<2`,_6"oJ*3Hfsr!Pt&SvdnO 4r ]4f3r l0b^8JȮԒgr>w=`rlgixiL𡮀oeȿ6Vk9ikDRոk ygH Gs'pDHZ,㥓&ۜ9iR׮so8>tTIqr{`&Zl<_5O)zZ=rR2v>Ư2P0-:|LE$+rxTuIx;9qzx})M".īEN55=4{,U Z:ciq{9фdS|s2AAtTƲbRiA&2^sytZ\i_eR9 S*TU5,&nyha.+Gt{+j8*$ʨIw;pwLQV܎3|d%Fui-Wr. (yW6UFrqpyCGӵa(#muUzˆaj %"M>*.PED ݔ|u l6OUDU|#&"yTl"H66@kWrI&’rl)L&!G&zqEz )D+GCJ`Hm3H Q?e ժX2jJ Ա Rb4dnU[L4H bIC3H2U- ˽n&[#&vGc&&ϰ-ÒJ,<~"^2bZI?,tkΟ%WZ-z)Bz c*} J(mWw/sVבx>fbEXԺd<>"R9,9y7_~8 PxES/-'C!G6 X 5R1ġj1M*:0xQY~e5v8fbc|⬸ԄV{]B"[J{qJnkHC@+!1bcm=#VqFc#?rlcdhTpQ+lς%Y*lue;- q-?-#HEQ6cרZ>Car`:uQ[ ]dwBV֔ht]>Hp*Rc3g5V'ٯ:ܯ]hŠ*҉N@V .H Ff^[*9ADx;C`2D,SK5TVn"N-1Wᄈ0au6 H]x15p҆J_~jZVx0 4A5 )РQRJj{rL'P}PG;*qE}ڸevIM![$ts JM`x U9.55%*kt/T Dlu3bnP9iet"!Su]>p?5WOej Z’M#TkJ74m<Δl̘æ8n7Odl'DQUQ.f⦳$"@"c};)KpxhQB-" LM(XLgȣ 5Qma ]T͝ ]Eӫ\hK J%`Y=,F`ٿ]BϛIC~ zn8a+^'̓o?ݾpxo>aٙ&I:@!4eYn95jAy,VvOf CMu9+e 5[Y>aT[Y LI3ٶұ 5vY0t+s ⨗Lf$3ߤos.qz6,<; DYpcRDŽczuBp:ݾHW\ЭEx:rm*AՑ;[42{K,Þ/n#8W+,uEYqMhR]=z< ZsC-j[?u`X|95Xrp.^ x@Elj_Ҟ hGXaS%6], }%@R2{Z4|0I-pe+V='PK[ָ5PW,{6rkMZzYܳV۴_̳9c{[`qWON﯅`OWo.??g4a^}{?[gzߔx k[,FڞPʓhe(#-7$UNg鈤 3(ئ llmͶ/.wTb5VC%s-8L "K~};e(ܕhch,hRgO)cPMhl55x*#7DNC0T|/b7EZbvnحXC75 o%349a EnC,ɷApRPo>sGT-M`Alumq 'k2 n *nvdrb2"[hS!y0E8v'9\' Nmo7ALu~uG֥8Z|CQ~ȊXa z5K-!w4,ۂw1Aۨɋ&iT(92IU>D7:y@ PT!,XidD/X&q&::x"n~>6zp]<&54₝G* b6S L']Ug z.Ϫx uW:aXRu\Oa`;^\?Y/u&\x 8}6|VuSnm-M3,hZpݒ8[X5A/[auEA:Wx*̖7; ,h5Lr?pt/:oazEn7ayjag3,\c1y, l_`'~ke}?$$c sXLkisY٣Xfyr3e^m9Uإ9Z=ιaS\ME28z,yymU鴨φ^nF)<^>Wթsmokar^a䆁3T&]u>3uVC}%s<\\"A> UFv C O p%R40u (_п "]yj`96/٢a "<WH[,Hs-D-lPh4+8`L$~.LpkV <g~$̋dp;:-n}~$~Ц΀vX,fs$ A+}>] [ Nlk$Zk, KR}C8`(8+]Rz8/tQ ]Sӗad ~kFTB~D[*0Hm|z*ux m9r0 6+Ue|D,Ai BχViٕs KxW|D8:8GΑV_\3/%>\4]w,<%9XA`cߢ͓z̆/g/4e+Ug!@ЪI/,bx5@  '^5|ADBE & OX`b5= 1F3T#6r| k _)+{y{_7_t/o=o|?:_bQ)7hحI1/@2:^ 8^h/?xI׃n6 ;kuٜ-odqǪћ" * Fh?e`izJ+bјj e`oG#ُ B)G}ȋk cu4Nޚ <K;GO%ut2$)eNUU`OI$W,O0샸9I;x?^S,٢IR06k-Ra; 9t<6U^iawƚ>hgxoS8ĭ!:6-C86Ȃo,pf)lL-=|DTbD-SiBg >=ksn$at|#IC_4У:рIuV~!*!B"Y (UYĕ4D!/cEY\* -#Uc *DKIsPcgb|(XdCkhJ +Xa ه"%ʚICV)J2=1 ;u.k%mLxro)•sa&Q 97eD$X¨}%z% XΒnR&i5vOP弙 ([a-06HI%_n`c` `6'@InAyhЋ ozi7"͛6Dh=U^=A?_=כ\~a^~uџpD4y\JDC %5Up! 3pv6- I56 jV4DHPS|k+d`6H,6EeP|w4e" w(;pvbm-Q1 uK?@hDF2x7v H(`pgI5"qF̱1m{;kp\l24 B9vWW! |d"/h~(B58[ лajZDkEZȉi1Fus88@ kġ G%[`[V # ~bC Asp|pV%8W5rsR 턵 [$>T.^kx2 tb:%R3;A!vM$eץDRDyxzG\"Un?i[Aa6Z޺sanS?G)^RU`DDӃm.GTYb-m nRIEWD^Ik@l=i#L[E<tws-YZr4L*im +2m]@xDZPR 9Tsy#dǨ!rHTP< 9MJ`s-\6p=":,@l`dv khg:rdƆI:&:HX /c@WPzM#2Ha8`iMwK} fj),b9Mew*2H7kL% 1rs\dkƄM~dn0M*&IdPdFST Y; D ҭS68Nij{5ez]0!zF"<8]7] z 2' ?zO߽%.L\Jaєu_|8=Ju|zrfCBlɋϜ- CْOǿ߽}߿}x>޿yu>MO`s|˭9ې /i9SLG s*g>9B3H# ``BbP6xj٠bXV axc@@dJrafUAaJ=;c-QJ{f в%14RR5!\_.TrBy\A@x7vLe4רmM·s&rH6^|lTG~&h3Hs MѼP;u$"fY!:`DdpqIuʬ a(X,OX=gQ|Plb9vv4UF :W< isD*$&$yf2)}UUsk LJ>J^=S9id[ڸ`9ma sK_ f|jX1B.E*81m2d2c\>\KoQ(I@8^lO+.fBé|,LZ0@6JBXSs-&GY*Y >>meXjÅ9g n@ĖeyղТzcb;\c/fG{Y p΀l'.AA[•?9C0aaRv䦘"nO;o HM`~R `<1`@!ʘ(OX!?$E2G+QtT5uhԐ3 )C%h05DYqP&)i]>>)25)SPZ[{zZtWϵ*M'tʀM/s''Y9ʡ*HwٲIP arڰF,RVcN$7>Qdd-P fVatGJ3c s̜Û԰bЅ+Rel>ғ5 i^%JAQqNM\Me$RQP^$ðk]?o_Vĵ(OJ@},@rF]-sEy']9ڢu5߳|X^E6)_C.so~û=[zΎprnzypq3.,'B.OAlC))}$?+arbq)ք=tf(pRJY^njXZ=\E( 䪈5\uXRhf%Q"iK)-ڞ˥Fm!5V!N`t$XH0(1- * В[5y%0?" ; FsG}a(q[EVhĜ8o?oU6ZOQpA"a6Ny1y=MO"xm`QD*KC+-h ՝EnzAPqd??|F %Ve`,X޺.ݕn?~ٽӑQklҺ')yQr5+.>q(s:»[NI# 7j@2o(akgƼ5x ev+B8&q# jj̑F?TDM@ň-slh'ǘ@ƕ9Լ]hd:+[<s52Օ{p&8'N>@g:؆`>$F$vXdVHUa="̌nLb+mց91w`pԜh5ltKъat ٤Fu=k.J׍Dyjծ/!ׁ腌TZpW-ϔx; nyDa4~j9Fhhخl[UlzvE$^5 NrdQ轲oF`٫6e`ԆjcfYuyn ֽi]U/2 4?c*AJ 251u &{ OFm`w'T=R֕Z?ZelG<RP4 :%+f5-b:p#W:Iں!+: ߀ V?5Qgud*>[dT2YzTq k̴EdZCbÑLVHۺpCBu%w".WU;\n4k9~NI{2%{38I߫qHgIv3B z7u`36ŘT쓇0M>(QYQ72Q!xA#.Ey,v3+fz2ւydLs't/$ *3eBb5"DPfۏI%LLK#cI`I$XSߋ ^fp36T$ Ts) s.R 99@+.YBY!0 '0qS8- 4{(Y8K|rENi$H!ĎOZ8?eḞ;oyb(p.6 ksHyD9pZafcE I"hӬn7oÔJ=,U\_&Dz-"h~LA[Ֆ6NPZ8.| wg#`C1`<& y@^ @.Ll2$i&:y-\$P'y򚯖" 1eawt- g`p"7?fEn3xz<JVLp2"rKJnչKNfII,{/e G eGl8i0;`2 4BT.y#q*tɟpLNɮS9HF3qKML8\!bmY4IJjWd`he~ޤN[ށ*R6 )3Xڌq$V_$7n\ni h3i,~BEb_` d)c>ڹZ&\ť&;3O7Zmt"4&XR~((6XV+nڋ&2_5X, 9aHc΄z/ݢM$I1T/wo^=9 b}o^?S}\n!sFK`Mg tL~pX F 2 Y |G2i|LD!كVܡsr8KpD"ׅԨ2J HH*2g;+r_Z~Vjаi"!phG~E!O5?vkY~[z13$2.}{Ͱ5zڛX, vZ)tz@UwoPbhځ/ol|:YB7-vb,QDkQrS"<lW[j)VB[,4JMniE[4eJЈ0"j2ĸ@u٢F*2Ei]a, R  nG&jŠt)g4}NnHg6ͨߍ/)7_ua )58 U|UT~MgnDS*D6ft>Z0v}('V @:Zl@fcZwUaj3; @&ޣdnWj R} ^ڢ6xMzc4即p*IbڃYFbRiFv *M4.;v-mKR<}kM4}=]V%Xv`;Hљ4]"};_e&RN.tPih>r` l 4'bi5g60]@ڙ%$}L~w0ݲ%-qbrU-v`漄"eImhǡ.M&^]^MTl IEK[^ hZ^khq"ZۥGA%3]Z"_f@MD[Ft`םjq| ̗ND=FrR0;J@\' :$^ZB-1.#-%-;%saWU~xnr3sDǧֺ kRy*jK΂-_Urtɐ1Ȇ/pXgnq1ID͸` .ufW ;ҩtGLK9) C ^}\^gZ4EFaYcQ'j |Yt+M7U('>ovjʤMԅTLlMbCQ)^τ1s-_3R|cm+!-0]ڳzeS+LT( BCZM%\oMlhY+CEw(D ÉZ\ F%SzM{k66vfAF%ROtݸӸc#7:6 BTF3hYfL2U%7pn]5$bfAEFW:uq!teiHuTz]6v34Τ(#᳂u~r%6>79l ` 1Ok)Ӕ2@9&NHn]{DQtMukZ^Q̶ߴhh{N#l Ҥ`+E6%Fe H AߢP)̘`$y_SBU52Fr4JT-s4aTK#BѼiQ:fBPZ(^<u݄h HȬ;fLYTo)FtXGi9Z]q7.$ ϘQEkzSsF`QA-#G5g1īQd$eU,7LR03vbdֺLnTF(bR>#rVD+mc(M%>94U b1!GmW5=o}6C[}Vc7LƸ|*TK9=8B6bdE֧F%^k5MZ/>#]גܯ訵ͪۚ{ Sl6zŶ迭聊had숳k2m.jYgM'%?\-[$,LY6ٵ[,LZyNxLX*f)/="Yb#,Úh>t|V๙uᐪY+ "@깄l*PmTxctF箇Ll$b:odw4\;W'؍GbHqYVF%fݖe[&]CnD'ŵ &* )]_rT`t9CKD NnHʤCK SbbE@gʘaЌ1_r7{8I!s y$Ornx޽W׸?A տei.e8Dght" 0}֔V_L@5I4;ZQ,LU &fNOKvh*MT6\TJ2,YxuEI 9M+3<\Η"~/DGf{@buL2sd+eFw >oЈh!2ñ[X^"+#5\eiNp"-\b ƌ# dw!=V .XvlB" ږWԥ0WHrkc(c<&<>s`\?tH ܴE9[_N"ec\KaX1[gۺiaeJf!Kvfu7V'{_Y_8¥F {jhBC7,}YG3?d؀uTgAPGhhGZ34M?֒M^">ݝUK_,\ROUګWò|v */ġGZ \r |@ C^V>\?> ,6>A) C@]\ L^tgzW_i|Ez#˫i\y>FhX@@ik,66.@zAZ89?%xA]y†Ƈ >NI'CS7!_&U|pdf%]Tg n) M5y‘y. /p- mfݔBxdy&8/P,pJ>TZNG⓪NI)+GD)cLeW*>s ʞ=e'i@_<POA.l F d+a$YMF~, Ƞ?]Uz2d0ˑwi/PuѦPRHw>&j16۪AY`AF:&m 8b@cV]FW Zo=J "ÔC@U2}*\3EDRC=TH:%ng䊺e#XkЙSģm5В2Z'I sP(8O*idi ēJ֊;^t('}JG{$1GB<-2)Tќ " V.'%VV`WJIezd)2E`y&De6<1%#^ULIZ)Nu(OO|wA8㏾R_~ϟ^|}o>y{w׸»^w-Û7w/xx݅6=??_˿<{ߞ~x|~o~|__77?}Ó*z"5^"ՒY7dg<Ë$R 9tL8KxQ H=x,~z ogc-4F؍0ڼ eFF)D4*nhQA#D?nq&%z`ׁjt96t484g(8 tWl 8}ssx *O<+]П9W]螋&^58Ε}6(P!0| /3$u08a#5uиJl\~tOVڵm6xYEFs#1WF6Eٲ\rȼfi LmK,ì퀨Y!RԲVYU ぬ?]Y lY?c6f^ET3TLO! UFf ꟫[{3@mYnŕDTz@,QO׏»)j#603l : TGk}ߝhE.H֍:le_Xã$oM>wzݱ2]?#u4 e,a"cc!ywu T'$W@a((9pK oůzEi#Pf+s3{q6c\i'XTe͢Ā ,'dx*(n;ep#OJ (ѱe !dlNRɊCE`Z4֦<O˵'(Wd*|ĖJa9zϠ@z"%`u]%ި;8|/h&4}RXGD2  s;\tkNq[,>!9W ` l{o rttSkN&2x>~/J& `bx<9u4`gJ ;)FVCIz]8ں)rdՁ"\ KnƨPZ<=]_QRH{JԞ(†ƠѵV,q:B7Tp2cT^'+40NT(YDgeS.'@nC*MP*M&+q\B!پ椫ˡVSS#K8 +^1P^# !,\3ƄV$#j¼}l%&o#}ʋ強Ei!i()3!,G93.1ڈ.9c !ɘ uEf$TTp&Z|# I\gs@N\a6h5\]<`#bFs\6M C< VWg0晈1HrAx[AJBm9q<N)8pnc'U)u@Q8T}2}ELd\vCу<QD)DhdYU6ߠ/slT)ư.)` B3!/^=dQKm1Ź xEޘ Mk7' ɊMX\[bTPg.v]OS"Slu^T:3zV-`p^*u*gE6JcQ.L+ 0@"xe*䚓)R,.T**L K㍵ķ j. K1[8^uKgjE|P dU~)RhύNXh e **Z K+X_ɄN=C9:lSPΘ]͝3(@ÐrXpQgWjgͨN)4.+eu\V4ixtQq4fX~fA &o>za{Up`SXlS$9Xm.<8ZG @^][WRz4Y* _d1*%]5I> J! c˔G5pq"4 lQɏҩLAj a얺%ۧ1Rܬ[RPt"v,ՑIm:\)ɾaks6H d9HtC3ubMOygSl<ȅAH]1s̒aSNV..c}}LO<њJZ.0Q K$nꄡ wV[5g7NsőJ @ܬNZ)1eĔ0r?Hۨ ͉ܮHŢlj6A@KIe$wX['8N%RZM6kMb\*>wh !+5"!K)vbclAz\>sɏ&PCR?1M9 - @`"9G FCIBD+pBRPb<V*pm'1@C$(+(1,.8Q[)]l+dj6T-O68.!U엛(5^zz&* Ȍahj#aM1rڤԴ f8\V^)dwP*&?C̤p刀jwj4g3diXifF&D\6Q슃M g8R/[[4}9`r'EF"=ζ/T"4Al ^ۿV9p^ 'Х.t5ΐZV]O`g~Ζ5׈1/ZˍڼӇ4X Mb50V=YBƬMsE`*7M|k- [ls95`ss2}M0ީ2j<{nv?BFoE0K?nU؍x?<ۻ[ 17~}k_Nvz$y Ͳ=5eF+5I@"V]pJKa;4{{j+s; tlh&+YK0J/T5dŝ^1wzu&o)`S{;o2\5^,q% S`FwMܝboY,p82%/Z(f"Oa8s&EKʾ kn: e,GUeF({T9tpC&"NR`=9J&H'TP)p I e}%rTKp<ɳU3ʹb9(sR)K}RTxVHCbQ0ӆ1ə 1^QWB(S9ßU3;*L(Ad?9Ӻ,:dCdC;!_{Ĕ6L SkUl K}%8|A[G<5UPS֦ˡ\3c.:f t12gfiCЪ<Õsw }WfWyMP+q,R*m>UW1[qw8['#un=)@s$+WW+*S d앹mWgO)s&u3&l 8PnʲS:JRJqeҮ\>4>x2 ^i oUNf 9R1p˼5fgqm4% #m@|IYk8pV[.p^),Og `C'"v`vgS ay 4%+{F+UVۻKG UJܤP忝^,>Q6G UvwK孎{VKK;V}e8~E_=V v&ap)˄3-2O7Ka 5O))޸@t7 X2wZp+[%O7ʷS9:ٗor`*/Ϝl7W1'pv蝰"5g,FQ{1^~xjd̆a!о! W7k_*1j|6NfVÊwIrtœUA}ohjq쯛צm^rQ Yrz@dÐӫ SsCΉHjN}UssL'܁S!"icm'K&talgvUbkXpOi fcȰ9d#]4-uXCL9fp2S(`o`+2TmCM:𦡮G۩ RpHϜ|-fPп , 1f Wc'v@ț;!~Jmm##mpx.54xbx4]xxҗH }AS)|= m;q.7!l$TXch8X`mCTRIu?<oO4RٴĚ6υlP|?*+ȡ1@:8ͯEУE.ڀ7 -_'Ci؍¤` G"8T/dϗdZ 6 Q`O sE!\%ٙn1$Weu/oQ'R*%ƅ8nEٻGD% m]ϰŻ@ a4d(ىZe&V!2pJQڎ]IK E!e6C.XMG4:ǐJ'.4!򟫄E.F04q {uՆZ_RQ)F3)C#PSrbeAW(ɴ"yhoRB J4hZ`Ad*& &lt\-hQL3 W$-ZMĬxf"ILdɥإL'@'<(zmFɐ(IrK%InޚĜ0ͩq{*FwL9M]IUu*X`=3w!0hKE~ < Hiq-M3ǷG< ⠹AJzw9$_f]2D&_X*4⃅.qb.ej;Y`hJNƸ,Ozcqh=%翉b']oi@')ąN% "YN T\L~V!wbY,}UU X7IdNE'eEU#pl?88d: be`n!b)6ɎK[ qF-Y|#G.@&u!E N`j=䴻_ƀZAgp^(nFmфC_mb@XN NH 4+iF@H $lVĺDh|I`S wVuJ} ylSxrntuPEw-]960BX5T.QȘ9R@Q$I6$+WǍ`KUb},d{bX'ুR,& ^A"Mu95ձdwa * bE :AD Yy|_:cXx,eAb;)R>]v([jVAb8]P8{wBu A%tjzZjoAKZ]WvΑ#J MƠaގԈ bzoGndrm1y<{4vr A;^<4Fiˍjgf1ujMōL *ɬ@{W<65dMYDhfg` 3,v{:EBR2[5Ն;Ya!wO>K%,?''}?ݾS^~}S'f|x_wSC̩ Gy |x*%4҃Pj7`ΨzGzIߣ5кrW,BtoOwY20LP˵G)Xk<Ѧ4>3)ś,,oJ.OK.TRFt+_!n\hˑJ pkMkNyna%4@z$]ҚqL ^}h.+z 0TnvDЃMs-)4C&<z:J~n ԍ> =a`RfJO(I"u=I~-мiiiy#bsyWwGȔM"]T1B'#݆3=5!7Ԁ[ms1"[%BSGɭLTь7ޗh9*`/RTH|2Jw8!#K*APU`a)k2i&zÌprP۬!%9Դn7zT*2耫S8( _&Nr|l>5uCy;XrSPҗmu<}rX>oa!%cP$kE _"FݤbG(>&4|=} Bj5Re߻•mayNvoiә ڑ6G]&~(5-^^Z QbZJ*)9 myM]0Փ/'tЊbz"{? y@rb}$+2W7)ՠZ:+vyt <(؁^×K8(@rTWs'HlXSYNY];VkCKc[h=@K$ZtG^`=zAÀcuyIoakͅݻ42ve 6NI6˔,^ 䀕BWa:IB{.PPxZe2N@GmFB[sR7PLe힊y pGGE| ;dZ=YH 5+kJB'd0kg6&)^p_I\fM?go 3=eϩԍkRBX<JlC(&?O\~ mo\`uˎM͏mJ3<3}2%  h~h t (p!35lu C zVuAO/GVM&{BMMpϐ܆PAGRVMk}-F|q2ŖÖV\pвU nu=E'i0Db=A F0fEgɐ?)m0H:1n=UMlǧRaĠI8c2Ecz#Fk;&JUi 3XJ8"LIyx*'F]GF N'S^A1 0pB;7/L Ph$7/y_˷qph_›7^~y`t8F;8 ~cVm|ߎ6O܋˲OD3a_(݋i:f>*}{hxa`߱6 ?#)o5 JG6R9FiIdFWtbۄK ч}r^mZMx.Wb~SXM ;@Rb)6ClzyJfNA wG pЖ<59d ȼJom;rjgNCNF~].aS5glvSD)^:SYi:CKπ?ZJ+Ge>-{A@OuH:(O:xZ1 ;e*jFȨt$As[< ž`q>=uGPp+˂+ϡԇ ;vz1Ŗ!M-{ >`RN]m GJQ/@rIl < 7<kq[N͛& s Q/Z6w'>Vq.'6c/y 5l6Ef @-pA^l>|3G}{X)g~khKր%o}szrdWdd?klh}a.7鍶G7N/XމΛ9@e݋|O##Lg&,x= KHreQ<_ؗxvb {ͧRBC1][7r~Vwr 8eek+GA[2$yLJu#7QVZK&U_}ur+uq\\.b.iqIK\%u(v˫fS<|cqQ;GWEk,ftJ@+ ~Nϟ![ˌ(gxp</&aaaDaIORlg#|2`⫨D喯Ww [Q_" >Xj4*yj_Q.W) J y0B☍.W" {0;Փ=FS~_ k E i98NAEe&Jyp<*=Ǧf+c:TZ7^ =fIx|Ir Us.*=h; Z2]Ր)Wc1̀t|N`> =6 6,|w|?Ѧu!#ȃZ,QJ/~#_`fs0sWG. CSR&>OQ ggюc%[.JGW-"4su)RwH7^=OL=:-v˷yWwo߾5w_{^&ۗzM_r}={<qϿ_ɿo|_~.?Mm<|60nh94[Ν}QD-F/F!)m7kgC}5];Csf,|k3i(D c5{c˽VChGngWKodJp@M ;:!Hwce<x;9 ۂCgOlk}Й/|94mہ&8$z>:wuŽhޮeWpAc^o tAB8-Q釿#;ʙ6׀p ?\P>Kd.nW<ڹ -I4 [[XH,p Y@,'dOO~qt+M}'b~_{l 8~ݗp{/ WL='t|Ô j)24!= (z *yvS)Ŗ]q MfQPK" OCM@j58-)QVN&xP\6Ɗ,?;5gdS clEEܖ T+B5 J{X@ a -Wg42 ML/^/< k:5XgfxvS3wk}Ny:j5SQ~f97h}ըcbzyk$^7R"6Bݾ$Q zZd2tQM/&+m|=MryB_gUU=JSEByN0RԽU/--LCY)paKhט<΀)Y`.,*`:7d@{y uC%hY*3s;U% 'tjҙ:LjCM2=)P*R{E]ռ"ZX袊"'Pw2>C7Pr3 ;dQv2%5`8@PlG{#`sԷ2O] 3y xn@ @V!ǮQf@vR㥫 si-Fi[ZY#X$S`1ǭ /`r0B0ujA, AWT5q0~ZAW*Nc n z5bht!@qRכ*=_E4ʏ1n5w'9crnʪA;DqC4N-kMq6-R߷uQ(+w3 﫦Ͱ$THmes~XK5ߛ:6}OkN^ΕrXSg'}v.d4x4<>K .72m>$+CQͪ Q2͜eBك ]˵ zuVArj&j7v([mjg` &eqgPߑnT88_j½Ux F]-+Uq䬳76Hy܅[ ah@H}ҩV8>ۺ)lY0[`iSVHi9+7@3}x]r2E Kbl~z>eaM=zbf1k4[òR ?c =2CDAaK$ofOUO(|yveW RZ 7iYm-R|+ٛlӵmD*%b߹F iؚҷ1#7*>_ qJV&4Ў#xtB>u͌-*Ġt͓7TNz潻!ٷ^EJ\@^ =;,t!i_ՊA߭F]s=\;NdnӃkuѠj]6fL Aڪqilώnd.L:as,1F{W=3;ayе l@ ZMuМ Ik7ǧ_c0C[Y'/*3>V"g{7& aW4U5Ue=T%0MՇUZBr7RZ+Z{hp3bJ njjG70y >4E|ۼ@=l8TW7[&f[E46(1f,#WFO}М~ƺj,v òN |RڅPP3SP N x-Nu3D4~ q3pCΈS6]ץ7UQJI7[ b4kL+\Ι_qZm`w{:zmG_mdppSgES:kFN 1R`ZE('OWJ^X|X7Ì楛ghrw1oaFfv_W,~:RT>Z`c0Cm~ƲqJ!k6'5+GC(viІn|d`n;!T.)[[DX>,R7*/(#悖PzraSe1Dd.O'ρwAU#ף~y7M><¦hKOz@g=n?S2y'xUZ0͠maG~^ &SWW>;$9 ⳴̆)%*tcbbb p/["Y͞S 6 ͌ujr` ɔYZ<F^ z 7΋,}g,Kog<~HEm/]DpO~F3o%9 DsΣvimSp*YP[[M( kPD v%\H<3CgrXF ZYs\{ZҮd6}#|3Os:a; 1eæyDѡdՕ) :n-^+s ^Χ^vJ)*ybAjֳxyfJ&׶( W:G 6NhoTOU o4sl⾉6"9ij%a|5*bM7EGyJUYadfDC'D6G"NNŞWaixY4gJѤ,+|K&Vr>EiaCN0[:H_7hR!\P].g.0Cpnn /6b{Xʳ!%nPx'mvj߁NK֖!! xf4 506yLJ+i(,]Cq&5v Lt@*wijJY)ڼo)MO4w5_ƊǂPC)j+wՅ@U[2 [j8Z~m/XyԇpxD.WmWZtVQj6Ehӎj'Dv .l L}ti5pdfYܔ`ZciM# waf#- ~7 .-iܬ(jY70 r151O{^s^+ꕕ`_`V>>;DTFWT+"my"G0\@݃HL1 HX‹c h\'躝e>,N Z.OxX 1oʘCő¬2߼'fw? abRPfw˯2_/Lf6쨦nLy0)̼屫f1-dAdG?x0A-nƭO_r`\0?f E2Ԛ%ǬyXCc ^do/9TVRցΣ|{`C)^6T~otAH1 ~|Iڠ\CxE,Xܒ24 l|Gmi.OmxV&9@ك}?<6e #? ܦ7>^{`n}2q_PS:7IMF'&x{{o+=z`o7My\px'5QYxϷۻ?>Nj}G!)V#=~RXnq!uz 8'>c*`./vj p Ke:~Yi%O/5Ctѓ5iH%I9h7A0۔A9Â9hՆ]+wa\Ճk9Im sa]Q&CRrTKscMˣ ]-(/(HAyWZϩk,31hj &˭w&1< HFĦ\HFZsq֓ҲJ \O<Eckhhmd#Y,Vb&\L (_ &y!c7ɠ -ˠL h⯔BTPTztXuÔ̳lL0IY_%0u6QJÁ*6/p6W l ĔNZbPJd֚dw7yss=N9`@pơ~V+5|( ںA|Ûji~rV1c[<(c8҄*8)"Y2sɱ "Ďb>Suq>5gaQ 4"gzy:>)|aIlQtRVDD7fVAk4ֲX@M4N.j ˲IJ d ,RQEMY65bVo#2got_- GO$6 lV7VE5X$r#Br(Q3͆x(F7~`Y ya1.ӦQz äp̫|8yCmFɚREM,A&LAˋӥ(jSzH()(][kucD8! J<,bܧG\_6;@7l)FE|aHC(*>ƚ%DըZV9$Ó;8bX'aZKJZv/K92BZjLHbJЌF%.;XDC} D9w\ h@Gw.OvgbI;7.5`k:--dz1hpX"Z`wШjtgwz,q{gV&mDj|6ȝʲ!,ZAEr6[΂ [}^jױ/k1.n\<fZGS`5/,KKV`T Jaw;G%|f f0qr?ca2vvm = !j <-`  0JEHCݠc}~thiOD IjZ\nP(Iy֍ K,ۦ(MV +ufB aT) S7,m7BMq v(T⽀LRYi6z/b 0ӀHUR5^]7L/LbDNu3 W}~<,VeQU< /n5>١rHG53¡XGhL_G@#_)^z`hIHa 2U$Ⱦ,*Q&.VL:pz5.U[#pTu h]iEꬃwp@R6obdh{tc\ҍJ7b HwaYQXKɌ215jBDp, EoZZA(*2c'(,<UFQ̶9/rt(6)dEVErzQ$3/e?ij? Y$93Fu ρ"Jg]:e]ȘX'6Pyg0g!ك777Q82I5=HHu tP5u C1RcG%Mcq!t?aJR0AyU8Q M][(gn{đ!@#i{UMb}򋗔"K%(Be 8>%[##m-A&&.}G pl XzZ6A.VoJ$@0)ۉù K/(0c[d >5C~T`1Ij5;v`^8+QN0b}'w[ U_` X/[)HPiجAliD Cx=$o/MQ}c'u3n2Ge'n PGklprхF""F5]ilf9%rhKc 9z/OA%4`04O]uwH sK*h bH; V|B$Y\k֯=-5i"j%p@g_!hvK`mCt AA'+smRt]uDZ[ԛ5ywP\PUqW@%AV2KB*II:I\Bf5 dVS+Qhe"C3ؽ1gwD٫p bͲ5)n%DʉV$4F"F(`,E{DZ[V(lqBU]oV(2[LF,0}<>Nk;AFM0R.2:ՈG}rCv\jve49+ U T0۹FXX g T Eimv[KRp"<[dKgf /NdXHX0 %<NeHIyd\$bQ m&~4QZ i.d ZNi2P NZ%/4N[& "y/]FlQ6WȔ]&(*M|mڿc*Ș%'-ͩ#79r~U[Mbr9J5g4I(ءJc E27CwqWksz͌ l;[lS`edNKJI3?캘 1npf ~\犕g!"Pkcξ0zdp~+sen/&>u&QF84V! g&l7\JA4 O5Nq {j*B9P̀e%_UQc(jd7vČIv>}'|<X8pBӤ 0<' o5~t(GQŲAR !,NbVjjzK6gTEjQ:*NDW=n gn%b„u02GiU&IZ <ZQkf4K؈R%CC2#w$+}qGOƌuwcRlw!Iij}YWjۏDvBsp0?H9r7! TjbPnHe(EB;Q g:5KvC1gL0Smp ҧnR>uA~j5_,g- u ^E %iò`9|P!J⬅X%A`M~+q`*pj)V G| f i#J&Wƍ0aHjfx'I G5ݥȱh,YvlUH݈gJ `#0zkɣΔ7)5ofk'J߬BGخr ql2i wZfm)eUf`4o}xQb\7q0 1I.k8׹7ε?b%Q;7:iQOko-@1Sf%nfȯBUG1ZT"ўa? mԟZhAR^hiB*ųN{R T`?PLu>Ì7flx`ŘCb4IKi9W0+Xpݑ?li͊/uĉTLF*ʻ%$āi&+rhX l . |hl7lmʍ19BV_RBCH}Y%qs<*3#O6Eg(2C@n "m@xgX2nU}MF\XΉ%b~ ##Ԕ?IxKwl??Xg__K |j/^R_el J+Ǔ/mmKA4G x9O~^R}ÑX=#"~7>Dɏ{'Ry"G#mQ>R>"+cs#|ȩas:d{3elx5|/54~jC*֎h#qz Xx*' 㥌gYF+rgFl0ɡWq|"H?'qQN$^*], XUzϥݢ", I/_xD"vǐNWoE0Vyѡo ؅En$c<d#nb͙w_㧏m XwxPn! ~]|$G[cC 6y!ATuwPӣ[o*,cc[Λ>)e!Ix)cW%LV2C\M?GT\oL6 xlA{y#般U` qn>ƿJbxOai|,XYFe#F܁!.Wm/bP"ݣiɈwo); e2f<n|CHzOhȱ3"fV ?OM' ;,ji1/+_?E*-R_XʹxY_#v8jZaΦ%y-\K7kJ8\aW/%{+*B|)D3v7q\HbCn1^} nދ; lQY+o2 u|}:nE2VO8yb/^%+ Ѷ^uu_~V= *6e("coΣm1,jUɖ/6!ߚk2i9v¿ƺ]#Qid^Ywmؔ#Mqh`BlPh+/(&V}R`[ksȵvآY|W&[C4xH߉k.^,dqZoس>hD \]q?lJ?Wv*Wޮ60߷h.?.EvcSjixQ|،VFp6yK?Ii8BGBBFZw}ýd"%8Ь#mՅ_}[<6SmGQ^pXkj> j T>⽃7 7*(>وkb UT{x㛱zA(@,%[],[|@#J[E[iiݕ~r4n+|}Lgahr#LQB\6=6T,3|ݟޤ{<|߿޼D?{o?{۟m۟߿/}~Żow䳷bmݗw_/hջ{~i/>~oRǯy?~hbO{O?w~g߿~շ_}|_}_㗼oջ?Wwى{|?ٷo?_|u~_o>?_5嗿g˧^>/߿|_~:l fNN? CdDrl),M!ǹNBe懑SO!!n|'$r3<ͽ;Gr,I7DwAcձf?;dNNAU+K`}(Oq7"V@9m\fH\AXB O-2XegnG`Ԃ_m,k0U=,TgiT8/Rfc!'oQPlxa^)Cl9Y"u>A\Yˣ7=zW-O,qhy¹m AtQnRmNJ]TBA7)T,Fp  AߊoGzl(T삠MAT5cWmv5E!Ta'1^\:xljmó {( : b pVa$b\r]qTuĀr&æV>XIN@Ն[G4kh޲XXb?vtH)<t .vmj)f#ݜuCٲ kyq'FA-vr1Rt3 Wk@7 @Dk%  DZiS05n_X./Ozre4澑(ǎ̶xOkrg_F(Ug*o%j?8p!{4<{=o X> bj)> >ĉSX/`aMaQض`j$ ȳYYcHj>A6aA FA낋ԣIFz/4B2e.8I0D@ݎ-1 ±#f8Yܮ +e‚NeN̡P+â(% %fp].g~/<^WF](0Hb$.2HY^r[L2,xQS d\$$2%d&(gÇEmf_q݌ E|`hХ {WsgcfYy1DZͯأZj|0B^ A (\ I G/tһO $5{UF)hm?8a (hf%ZiUAĪ T[S+O4U8ЖP}$w ZHPB꞉`VuU\Jƪ{H TE<റUppzJBȗt/$5ғDxY@=#B[tIdp7 \ՂdF9#J2ה.-@iQQ5שQ[_MaFFa}D"8I0F廲\#ntyMS _]mWm#ܒ wKZ*|٠Jbik*EX[L c}RyP}h\)B!"T'2 7u*)̏<88"i 3t8 p!䎱Ns696톾4VcOhh3fY6 ,&@xObNsF|k M>E˴E ǻh|ОKUz\=*b@f]2`)51(p&5'\duFHf$і3M9f11qZ) [N`:aj\{/K_,laPCI7y ="Rs@scI3)ƽD6(%ʴpQOB5b܍Ӌ*U!ފUE0h5aXL:&rPQ~/ /kkJ kNGzp@;ZEnSMT$Rlŏ48nc9ؙLUDv$)g߅o+pM XZnrl7+^T}> WqFDe{Dn Ņ8m"n0\B(ê G35ZX, a<`;uQcivmzg0WX`Nj<>ǸDiXu4}af_օ5"-e~<6;lv;Ii8^6o>)dJaq@ho%j0B8 umn.tX1Kɺ,.){ yb/LS]LS9pgF Nӳxac7sV #wf谄yɲ091%=҆ɖlK[2xxl_w(=;t+u즺3wG[n߅^2 vY$ ^̒-Jծ. ڷ= r8V?\c>v5UOy(8~Iq7$6jbl^z` ]J!!-H|^gs&!'ϗ wD +:aQϕ=V$PR"@Dm섴` vnă 2+ÍFAX$zj&WEvW ,z5Po !#";2^1a9qsDmU ^R9'XܧJOkiFf!X" U1_]Q#֖slq_vw_`T#R1Bq6{/I r$[ Z?xo#mJkZڢ_KpZ<wTEDz4 T-#f ,7*B!dYEHqJr{8,8>KW`V;wp ۮ-[z;!"W覅^ZDt{e9It_d+e!?&&+8?qAOQ(p {1!l!ywcjPZڼ줵Ћ{Qyn$zYp;{H:xZH]Q͵f)AΦ:SL Q)x }S6m&m/땞 tH !T8yr9}jzm' R?[sC5,rmOo77ovVz;o{zz'wpVj eܶbm׷?$=p](TufJa^P}(kjY'V+>~wb{lv*aj dG,s1h< tBl?qef+L_qGnl^[[Q9 p R*U`UBE.C,Nz`Y 18N: LnKP)V^`R'dVYB|_XYީ 7sC/EkaŅ΢G%+f cyOZ6Ic-v1n>p>h`L u(2䕩5}B V=є>ۖbCRU:FQTpȀB _^xl^:kV 7 )a\ΘmC,Pl{fLflJ{sWgѼ ||1Ah) " !enPYf+vy.}ĶSulj)VRă0lUێA[V_alR[b>>(VD!+OV !*i[ppjUYݼk'^>sD NkS2^;U(ّ]̐`޳̽[C!IWP #m吅IqxA Dr^MPn7﫷RQ+CwJ.Ԍ`k%3H[QnamLa59w\Hm)n=4/҅˚?MebW^E+WQH`ʗB6c/qu0riksSRv/~/ӴX5 *,f71}.~wZv̩63)Ovt#d Âc ֔>Q3 gMD@ZSg v˨*Yfc{)Ph I.*ۣk&oR^{ӄ"4kнnڴ}wR}^F\ /bZQO^Vj+;C,baw&5c\v+T ̝3-9H9sHf-iUR)5KYuzU6䊢HPGdJT,a%-gR;oL5lMK(*#}If$rҲw96R"WR"=HJ'QAߒ=Z!=`oF,V VHKOD6ud&̤uPQWRk٣`USK &=w0[Rkd9gA&}ޱ ,6#;R{P}=&TpXHmRn3-oTP ^pVUk)gۼP`|&^t6liV8Lqө[QW?ͥv=1<)hq8h%f:W w{D Uh_K5 #*X“Dv r~`[PЕ1/pVtLlAZ6*>`M@@{JWjB4jkmxMKt,3u]gEQ pSݗm)ky9e/mQߗnu6i_JymG}זHvk߶Ks٣.CQgǛ|2՘]?vvd:xy?~x$?亐ۏp wUۻRP:}6eq^.nX <پ}^};P]l0,hT%.҈;ø&=5i=+-%?O>޶v6X 驀o ^,2,vuy|Js#m->N\4<{w>~ڽVPT7/頪n>5>ߦ%uuCrNrK =J'MwmˌNroݱԢwo~GIr/8Hn_.Te Z[{y>G<5nu r,)N+EßޡWg9gܧ ˍ-:~$7@l ͦpgp\ޙa/=+LemK釈,|!MqY)e"ʵa~;cOSJq(tMq_],Zzr9%roC}bN1xmxGP.y#}'uiѸ(8ʞy]ǒ͜&PA$O؄^9ٝ>M=͛aLw_?馳WmQ;ћ #ѭI[߰a8g.e15 Oi+97Un S„B1ZK19evs38z;t&HK7 t ;߬bU/V8c+tgx雷 f'}-$|<> 1 b2op;OV{}xT [sxe_ip/Oq/O;s,~./mm AХW˕fs|QBiXϫ\ -si: KoJWkjf?umoAaewf}LqiSe=jcr8\Jmz$Ew?Gؖ`Y%ORO8]2^dVaw0h76?s<.9JZ&v8caD׶ǵqY`>MbFWOnv~weC>\|Bށ{rً|͡V aKԵui7cW>q8r*|%\\qڲ/۪f>ft87H ̢AԒd aqsY$_f 81'U̓dhV̰,E nD2KLw\eE^vԎdgW9EWu)Nًl;/cy K_8lڋXٽ$Z QěL͸Q] |JQv˖яV.oƆoa;۲i6ˇy,l(| Y-fDAmfٜhgݾq[5 6NuaK1grpvbcUP1;+e=a1OcupݝpNRd0'8ᚼgPԫm 2p@Q*;ۍĠDKƊ܉G1V`ōdm3'`Nm^Bpsx! -kZ_;ó^;/=Ѷ2u/u)=I<ΜB,ߗ7uw.kz:>ӄRFL S"lw8Y[ryPly b|ݕHK7kD%]skt{}eu:\K˙ްg$#.Wۓ ->lsAj;rgVUf n,v? as*\U/&ROc;&CѮs

$DOnԶ\vhȶNuv}ip/rQ2)9zЬ:QyF񝖏<%N#mimY,ɯih!  n4:ÞAmRnOl)ͳT*cg8,;ZgIG4Fs~:YsnK8qAov85J+-D٫fXsۡ.ipd%_ܴV;x'{yneG rlzB߭-mh-M~5]oo( JT$ uU`ӓuGaSdάꥶO~R (OôŔbE c|ZiY0hAUkc3-q/3t9椩?I okRT`'2m@pd}O9OQ zȶXfP܉HKn9 !meS=Ԉ\ |i(njm2m؇/i҆fF=5T9T^fH]B9\U300D(C*GHYSNAy W'+⮷q*cK~x%<:J%{ּRKemI-h[ x{ŠnNE#pQ6V9t,Gޅѩ:uITA.k)&o-3ɚl C VES3+y[S9f/ ڊz޺\nZ=$J^Lkzb A N78yQ{ -} bbgT,-Y.e+XCQ=kAQҚZhՖa5naǕ%$+֦)u=aa fI(hYԕp5;J-(j$ ʫ]q^eU \9Ҷk!annz) ^Nl|U@i NrtfG/[2 !izVW\3G* 9*9B<@z6m36l |{ J:v+xr\>PYsi>T+T9QJN_ˀIgĆuh"w-s(30mJ6 h}|{"9s nSՔCo]mt z"fOۺVtƗ*!MoV@H kFtf`"ov!iZ7q!-lB@# (R2f´r.\Oz,M uP5ݤFn1D$)dn#Ϣ#H$[o.mj3US{2w]Fe ^dƅQ6[=Qi.w].f7<%Å!4EXZ6fEY )BR>X 0U7CB'mg tY7 i]G񆵸U5A\WRel[ />Re~R #Jx1 !*^Qo-CnO`+ o 7}-#o 6"U }9`fAf ъwMˍ9bfe.ONEk͌<&AaNA9`GMi?8V4}lS@;~CKa fC.+7D$Lq-&s1edӽqmั5W5p9즜7/48LT'6Aw\eR.F mPVI{nܯ>>~xY(0lqK^jUQYX004o|V:¦U{bzziԕ>Yra~"A%صC|̺e + {fq\鏸H$!Gסb`] c0G $>d pW`ѲӜajiekuvdu^ W/Cz5^L9q7C&" nq4{AO0`6=-%[h^2sˁ%*AG8\8֚rs/|PP%LUcp>B6ZM|lhFDU%A6P񒩪 X$\uV9HJIH.30$QTݯ{y*nauW 4RLmiwa/ǿߏR~1Gby~8mJݷ_/` kらi?IfVVx=B$2Tf,UW A-#cBTMWL0`3u/~́qu1i =*rl<0Kn؆HYjo#2Ւ-K %3u@iIvf ,69cf8/P;Ǡ𷑎zsZ-l\ p2aHjgȉq8F1,\ۖ0 4w =!"[N9jҍ[F ; .oWÅڤ &zz2b-O ' 'hQ *_rHV`s.0b_(I_:^,1q2Y?S[ mQ(`ҹM"xSRy:,g#n3=,p$Tl%5>z X)(ew.U[G[ YۅT;Y4ԑgf$cXr < mZ38 b C2!O+ډWA8J!"V4e867*]`ߪ=)ari:lZiԢ5d4hE46Gě@fbc>WYoCZ  1C*Tqq*cd>$"l-uy,nuv۝ȭɱlSY,q6 1Mi1&R;TüAcRRGz{YJ0ymԑίyU6AyrD]}p݅y "-KulLf_N]ǍєЗ\o*(YyEfm҈fO$L=8Ӕfׯ,@!V%I[zM9ph _B~Ed428nͥ4!+iA|F jd|F=^V %4W~jͯy}lCW5@~؁>;lG&XI>Um;];cLT"l|^+ 3IsO/dEI i*:"Ltlvv$$1;9Nuk  wT{]%..AV[ޑ$ XgI+$9  P n+E"F RT[]J#*q rbX*yu ᡠK2R撤 8]ɟ EbY]GI4(/ +B]1\U}l iԁOq`& ~GKt=AhZ^ _oZ6 Nd$H[퐒\:4E{?ڶ622$;4m\=pmqօnY&6qOBaev. @iΫ]itvw,)3<ʎda(ga $s@Pm{4WcF}Iu~Ch8rrHO^<l`$HzOSA>,!KŤ 5O8\#d@ VtiӸAd*P o? 1$ĬLj2mIiܞD"Adљ׿ٷ˓Ľlu9K1It"n# <-lY6OQY}KQqW1]ŵ7u!y.:|\B>{lXPƸ樃 ɩ2KY]<6y"2`ٺA oaLސ=ÍIh6cR{QAgRbFkdpC1OŰxY훘@\ptΞ^]$Щa a%( D򑸙r~O$m̋ /s:KuNJ~|${ُHceHWϼF+86{\^*ݛ]Zm2*=)5ʤ3h8٧~PrR6Iݹ hsfHw}70e( y'Tq ",tcl5z&OK&hˎ$iܹ9+SK5j-G*L;r2&<Mr~\%$'i006'c?9,nffq{}L;E{+c79 O]@*0,+U oEk_H-Q?`m?|dwLcpF2" +Nҭ9;ʾ9-Eѭbx& -'>Y0)Z0`1U [ Cՠݲߪ4Z*w5 :XϬIM+xɾqF/G"'s ڳc& TAR-9TL޴R,ܢ ayӻ+i}:1YW~}igs#ne|RupG@ '.5HynVq|gnt`Vg ,rEpo‹LBBE4`a,68I5RYJ<9#'K F{leKœp֟kn7rf΅_`KlSj\I=G }'سϴvG ZjɈͿRe56#EWG-YcO '˜l`IԢа<7wI52A'$*!uCZrZ:zaK'KpF`BryI,uI R 6d.8hm8!+؝X}A$2]84Jlt `FAt$c+=Bq7RmS)vO:KȪ6C*lJ7WJ4Wc]^3( ,Dx/M7z6aɆlnbUvb& S̓jfi' JƝҢ !4nVN¨QSqRULuk"T2 @wjBxgefH + pPmIM.I"6QL4L={Fjx//pȡgI_*HW'ݭ$@IyY=7R0n5Mbuէ+->[o頱#Hf[rbq% E֮c682.yp 5'v8{1TŮwJdZ+Z%Ȓ>+ϜRňYCќu%"q٫2[dbT7EXdMmvC,ԧT'}^v=ELRWVSS҇wK.+,t01RnGݞH]R-OGg3A[Hևjw\~Y|F+Bٻ‰gcŰn}Bh$p#lm hzX[KzW-Gҏyϓx菑R=-g `,~kַm,\82bA(sABI%kC?PL5c%hr+r t^`{k(Y>Ju.3s1GM8@{.7zZ<%I蚛'·4V[rZEmbܛTg`E=NʆGҍ_F7J}M^ _Ƿx݋.<.n%\NKle6y6xW~ N:9:KoBtoOC=3!EF>̓ψzAذ#ٜˮf9AҨ2M&x99~,NdoM_ds@O۫I1-'xy(frsm6HvnN|:x =ӂ87<ȑn)] ]ב=@?uI5.C1wjbD|$*[|ճ2XC ,)Xm'ެc g|l<N~L25|=~v>EǬM tDsP$O1wɽ-f/ ;jjf_3mKlׁču&kD֕&S6?q'`T8k\)1\ us=iO;` e@7ElKa l)@ZxjIm,S}|)u¸USvISyL$oEBC:}kǑg~ZYmH5F,sg> ͝ S10qUuy/-W⭪|D㜈W9stgٿps,rS-/ϩ)ƚ*rN9_OoYS/ϡ#EJ}GOGbsןH>Z}y\N%W|;}:~&Hg_Ngʒ3?|E'9% =_NOIOg%۹O\ه^O *U>ՓOKVpSo5+'/}#˹)ė4tZBS)}A|_`Ov*;}E=C F/Uth{K} /Ev)do%v/ph2 sT[1_bÊ+ 1h^B4h[ a2sCsWi<}"H_24@UXI>=S믇-,j ӎX9'H驭sh Bsd?SbYI'Ҍy}}T!Wf,><E,l&yTDi/EɥV:;IJH^HD"{qzW߼_zy^~7__\}/?|ÿ? ;|]hÇ˟~ڏ韾?)=[{j?ْOˇo~ۇo?}=/w~??w?ޟx^}1og|fm^l/z{~/8o_~sͷopoտ}{ߨz\#=K?KlapcJj ǔ icO]UOPʓ ]L8R1 4>pGطSxNy4VOC5ksa>t2.qNC8Q7[Vf|ʼnaг-2 0I%RQfG;В: gdg{Jm_d֐О7O'AF>;sq唐#Rվ5ȣyv-NbmA M-I%5kXzI_]D/JwW[-wxEkwBTa!ٸ7 >ML$[‚348A)}=U ›ȗ0T*Hz8sL %)VC/ַ ߉@[$oUSui2V+4ӽhnШ%0V_rS5wOw;ڕ]W^~6%XVjXRyO%6u#䤘Kp,,cmJll$eVV B"!2_+qMk%ǡ_} }p/; 4$p?KzVs@W&ܪ֍N%05:ͣh#c.DI5HQ0vqhv=d=i^j^UGU0+-FO$okR1UUUid'DFoR 6Zj 4)AХjqbqcG";kVQ/Vl-c8p6;w{1nWXųm}蚜UFo s9E0ۜ"H|x/Z!KڲVդ$SȺ܏?ͨ('P`r(2(D*nIau^m)wbQ٘/H@y Ԯd?6ðڪZH5F}Z4x, Q3pqI]O|n)(F|BdrSL%jQ3kBksuYԙCKUEȁV$ blG^Z'̈́CC3—|L .q5Qڌ'EۓF"8Ka Vł*^arWNϲ¡>$KyK]̪E"i ?:͈6~q ь=]UUݥ,4d#'/]J°7d/c"c1?1,ؔ+;L D@ƾ빨&~ '%0)E"‚(ʗ.y7Hr@-/ԝۦ܎8$y9IyU΂ϵlNe}1g;gle r3y &griL"HT؎)g,eRInD83vC{'@'"!7/\~d"y4P@#C&b(r'YmRh xWmy=<ڄM_k !8Eq6rl#b2g'!8y2>x9sȽ8 ,>Ge6,O1)I(]"1J&Xʫ.$yР٣69a"c^6cY\n*]$y/K`9.GUpˎpMR#OY1~2#d%Z,v`b;?J)rj=CX ؚNPNyqqEPʏ?k~;l\ҥoqWRn{˔ES#:Z5,`RM9nd䆟9Sn`~-o_byJ9iJNy82Zqb;%YrD1+9{yw0FH'w),'?qbRNA7ȯ<%$e2z (ΑEǴKW9UXޜGkYZU$7W>aRsׅ:|T vIsr7{v͘ q9ĨYމrp(d] Cf]d -OD3ۋA M$y9En(rdCgUrtf0:Kn{SR$^OSDǍ/.4[h5Q+1yxh4FzxR_*[5*9n6X=uH7_r{xm}zH~'D5 N㔉vz|KHZq )=_C^"(v\гuT:#Q ֐oAV4IhEzz\)p:ҏwM'xQxM/N/^);ߍu;C]>;^gdǧ}"v=5*b T$SX1rv$7ݫOP9 pлWtF6ik6xZӍ3QyXOf[Zq*O}JցWA v:;  p[#I5h ȱ1B],`Zb2$=iJ(N4*M`X8KcK p|#q)܉]U0Bʟ ?8/\/r=(8VXeɋ&=#KKbevRCN,U#Ċ2:2Y%pBi:Tw]T4՛Zt2 Tڢ) H߲aqgNI)p@]%t52+ 'n)EX K(Wi VԮ<aV>2#Ì *K^)\%:[nꟐǖy&OIE. S2Kqc̢si,O!fK|WFG6To,\R.NDDqMYJtKEhʲƌNhw qT\ Bqe-p PIJ͇s5IUur#KmG[(ѣf90^-S<ԣkAئ-+q#S*).aP*<(BTk"+s{(rk͕#Ml@\bjՋg>ϷhrH $cUI%Ь0r@T i"f2|zxة&d¶Vv.r :8Wɻmth\Rw#ÝYocGb4DžFwzz#jh4uڮ[߾kG9UZT9Y7V7M}vPi*t\(GJf)B@rh\ّ Nj&V!#8]qRօJhU' GԉZo1sJ⦢P( IT 6A npsrDCYL\rlf¯w &j$Iѵ1 ċr4d uTyw7T0٧bxNDҵz4MUQm`G.awGTl7٘_ - k)S?Qblm04hgg#.~bmq#)Eڈj/, xɷa[Hd$E+@:-$d;"y^EROa棁eq`h5 ܼ$i]Z4XߩFos&ܤlG<$aUtگTJ)}!o( ~XVk4Nķ55zdcK[2E(7 ס9]nF#X @N~ox~1J#TVi'UnAFa-1 =? L㊗iK/INXqWѾ1T0G~CiScW@0<~,~9+V9rb)IS#6:Hs"61]n;8˔w!}*D)}IzN1?J fʸ`*6^{7a68Ђ,FW; _S#2<5 0.bK؏OIRow#̬:r~ץ_{aOokc dtf8b[i!yRoy@SN0[I6:>%"Gyw$U zʸYF Ł*NF(݁F@p وo;QgƼӳF|r qWNSIE^V%!BZX5#FedTjf Jڢ*3Wٗ}ʿJfiݺ4T8L.ZFWgg+S3 (4)4|n>OnINu?\@g +p\5.w{YiQHW3^Q wk`| G029YZ6--;~QjE6rv)nL[+Nدz,4¥Y#I?ͫ'SשA[~~ޭ䆆 IWl$LB \Է1WNDn';>I"BԲ;yI#}:yƉRq1}QiGsMtVI3.*ۛGy&6myGLSǹJuriU\3ۤcH.Uq,ϕ[>1=j)\AjmFI2?ԁnm &z=ۉFnot̎J]wyIPr[cˌ5rjyx]P݀E9[ܶlҬ;O {ĩwˢhS7Xe2t'>5P;կBᔧ[C^cD&G5ңmMd}4pzMdzeSBc"ލFm"p?qQP}n[-[S( [s{? d7LW9ǫ- Z۳.iq: BpWG}_Cs~im+Zɶu-|HĀz˖Lɩ٭&srrZc4 wYЖ"HmEX^\j75v⏦O_oST+J AԦjר`m 6215h iP^Mbosm7ڰcX ?4NGXm @ô~W%݃ \j"k|qOج]bz㻟K{lUޯ@|:3KF{~ۧhV.y2%+KȊ!SmEh3za5 \Sʷ~?ĩ-LH]B0t3Q?D'ƶ뷛3:H ں-#$hW5 W` Q,NH*MhNEgm͎оA_d%;AKŽ48@\GF&8_1&m5wę^'\D)M6<n0BrZ X>t:؝r4ډX+ݘL) Yw= '4q+էڸ~8v#[ -dl-Yc^WTErDGvKV,Ia\1a`M%q@ҔZիt$'he)4D.Nڻ=Mn)IHraZEoُCixEMM]U+HE,Vp{H!ѵR2GL% АXעՒ6k#&q4ySVES{;PPG1h3nJv1)\S6^irE;1`u:PI$}|4g.zp+ĀGL&wˌ˧N"WuBJ u]l%՛ʭXꮕkVWhǠ :U ueO8MyPפ&%s:6-'sK3g4n ڠeHܤz歊rف6K*\ݰ|cҙ;Ղc^Rr:FwH՘\XOvH  fv;+Zn9˱^nUIqջmTL0{䈕&B`WFW&6ݫʚ^jj7.\ۼ*2}n*R;pԵG“L1H7#-ưSiP*5G"t^b㸦m"aBOr!Gq4Rpskz D\E-yT?%)L լؤȸt!8$6(y$C2_e ,@Xo:pv¥dd|:ڂѤ \ɋ-&7{IHwJYHSIux"m7o?w =V߾_^qgخʀq(Z6~+驴6~'~}pѻ^_~i:& z ጡ):h9UB&3 ??P Q 1{Ocΐ 3TЕ0 ݝt=(㸔:-wT#5W1MT'Mkc:҇8Hv d .^˷$Er7UZ0N)&;*J4fˎ0sN?@ @w@ MJ+_;4$&!Y.jBȶ'Nݕ [?~d۸.wFΛCb1gk"WXcO#꘤r-:>nwވHvL;aGx6$`h=P,֑/DC 1fRo=׀i6[N ) `@,\1*m"O$oU#S#JSiHzo}C͉::(m!תLE;m&-HprHH@}~r3$wžt'>v+LϽя8s@mfdQ;qTғij|(43A+yLkClևYcCǁ/D{ Q=BֆF zd!%g*hy>+ ?Ѥv]ZI^,ױ8Fk\&wfKAl]uK}X~BQ{9' F݀Y8pWT3!Sݛ?6zys~? w<=CphDmiy9ތ(dS{zƾʏݶ0$; 6TŚ; =8l1pBJqbI hKP|BXr9FNB9h׋}^T{, @ΌcCG+8rfšaJ?Ani; ~ ݆d8< BaWu'4ni8txX/HEɌe";6ң{!;[OYU+DĮW~*=l)k{ G'wO~& ;'S4SSS|`. xxJx(]U!u)Mr؜p vUՋ3X{QpmO֖_|e`'X[ֶW_#~ ֎OTc' OZt=cn3Ag'@g!#LR=}*]OeiTPeì7A?()C_9a2BC][o8~٧x'5Hxؙ8޳5q;ūnQn;J'){},Uר^b%kVW%OVoVu A5/=]ߍU_L lEfy Uy[˻үJ75^UmTyDyDDp]>Lh~'SX޴#|8Ɋ+MbwzgCT)&13.-Cf#jHe#i_&TݴnGigƞI]])=ޤa2>f|E)&ͼYr}CZ'tO7O\i\/O?~<9={+V+%7?Ugoo?qpwsWOW駫?*,noO7=÷g_Zmy$.Vob_\`h;Izgy|;?_|姿/z_n_?.;w{z_Yb\;[?~y|l?mtzrq]A_/~/~A?6_ATVhEB db5hn5xA2Fx!3Z6H4Ln1Qb̍(Q~ E(=? ۫P~Ul%Ы_# ӑl>/@SBrV^ =@f;֊Fc1/-D#,gtDA:""zSm8mQ)5rn3ʒ~P1&JY\^Ή:D&,;[@vkI´* dayu^HV,l@zO'g' H0olT Db?ǀcŻ3R?8ñX|{ޅcl?؃ (KJ|P6<+c ( (59(J~lkyԐ,] !Y `{HA<([dsr1(˟([gNPX^x (,Sc&.vTJv|4{Ij Y}ՊsrbwrѮMH~H"Yz XPYEe'(%%dl/_&1/*[}Aey&T6 Qx@NǜEK{mQcN5~w3` Y9.Ĺh98͂ -낽n9!.Ra܂|bw[V-M *[z@* p+=-  LP n}n x p ^ՂV>Ak⬥u? X}_f뱂Ѝ`_Sr].Fiް_| _ø|c_ %L Xы@zYzn{\|S(l[ aX~k^h/yJ°;cefd;2?? *32:ΛON%PcɱV91:°V֚㹏iGayա,jtYXF l\U1-䧃 _:K]k]M2u-4T> J#>hKBSl=hAQ[1++;`)fy9[ݞdj:S]{Ŭc`;MQvBUk0>JvnSeLԯ>8W?cVj߹H՜aKWեruڥr5Tv-xZiz--liV.]N kZw-ZŻS1{k T΅D gMf^bMhU7״QSx,y)p:,[B'UQQGbU:S18px<%ѹM.-^Ci vdP> NcEPF`7y! A_)l6Z[@vlA͊okwv-Zڒ BVW|-5kq~jZi _5-5|mΖN۲2mٚ"=`Swu;jw@.- jwJÀjqs#ĝ:^)/]Z=tvRBe*vGzR,nYK9].nuLn |5.R`0\SEU8-{!.=+'Cq.6f;8ۨ-oCK>XUA(?cܖo?EU+* z}<2x2]be)v6&v|lUdTƺ'a[:qhfA,5cRmPSl<7=;PB'Gv5.O܎Cز'ԯ ޡj)G| ajc W+. 9zR{Ja4P;'iZuۘ ߷bUӎisBkRQ& |e2b*WR4.k}m'm$AA4Ĭ ^QWGR+"MZMf3𻱦[o@wqA5րҘᡐQX#Rf+?wov"I }%j$+I#N+8_af^IMh_W>ȬZrMNz`X $+{FV'-6i:d%kHH]۷`U+ Y?xS.+O"0Z 9&/2w0V`MV$X+1^w"3,3I[+ރ -Yتa< p%[!E}9}NӉ9K"v 'E3lSaF d4% B;HchAEr2N*5 T+F#d}[&bKfllٴu К^ybPS2.SР7ɤ1$Dfc29ZhnlUX612[U,,'i#5?jٹٍ>7"MwThA$lB_3Y`nE\AQڄ>wTSa gNwpaC(|. iQYnBTb3FzlMk .;ȕe8M IBքe15I0嶢547@OȐd(3iԪ*G.032a4dmlG|^6:-WWˡ$& :]16yVDanlܮ"9h$^2g30{p~̱dM0%&שXQ[i2P]m1ulc0r 9M2R"RjL~bAQ"p<|2-Iߐ[/P1RUH;IKPb3<mIIpH[ hlΓWϓ5NRυkwUv]֖˘%_c0@tBC/}[%53y:,w{!j[j3]g] [ib;NYgv\#/"o?o|w߿yߧ}͋ܛR ٧_>>ËWl5???__?/s勿ܿ㗟yo>w.D*=MoU. ӫ[ʿP7 u^m|fl|)C!~*?yqaܴŇv}4#g$K#sԧ21ϝO9WT!vWky2ȸע8lNrwt3 5*p q.PNidWZ4wFh2?.A&2۠ҢIoV觴>}NH4#ɧ]ĮL#-_ZCZƠ&样(jx2WMl۟UԖ2)ba_<$W\/wu!vTN3(FI_|ܦQjq7kUW(Kk]K\dujMSS5)ai pIػ?~%ݏlX a*vU%ؙJK%UB7ghw"zvuх3ϥ3Jw8gizVd<74/UqZu ^'*E׼H}I" 10n |P/9CY{Ć=]vz! ζ豘.yfBWo~ Em47Ͽ}">~'m7?"-~'=o~~}G?}קo^|͗/߽&]?^y-߿_WS7~O!>ſH7y垞gO?W_/o{ocɏo珿s&6lxgHlz+dHގ >LntڞE.^lV:;*61ֆ(qďxu2dgn?xS^Q,3ӱ2V Tg }MR Ʃ@Ii~2ƞ3c|'qݱrߜ}`\4RK,T*oq lc/j Ve!p{fmJ<I,vh5$̄|Dn8q8vMfK%go2@J~ vEɒ)0p#H :ҸhQ6J4]ӻ[gVIΌOhT .Y_Yֱ7օ3x)% ;:r3Q %ĥmVHX0|7xgdے=/гYF(N݄93hfQ]Y{{UeCмbReB]9R|0X&&1Ȣ2qUq|{ 7D(##k*8Qf K Ɂ 2|M(2/싨 pJ\S}7J4rFW;^,i1P䠢u?{ӵ}آN9PWtD%!L$@ҐH2)B/& Q! K oqARpT/rilTÖD֦r&WAF9myXs_337ozFnZ; {:5vLNy2.{lorx$# DyR<\ǀh㪚Nj1#) wZ9?|l2H¯' {mm\(]CfV`..#<&Z;S'ESxQɊ+ir=ä `틳3)9Pk˖YJ Jܓ0oزi ͤcXН=Y ETeX@[\ lILA{C’n ElH(U ؒPv_p9$3FbLP$ Awx"ALN1+gyϑ Kfy8[ZMbrٖ $q+mVMz`111lF> {}NY((~zJ#e:1*_xpxeVs V.ڻ92sE4 g=0So{V85X,*Vy/̃<3"H`|)r;|/^>❐*~o%S+7D>|/_qUۼ!?!`('%h(I! &oj}8fHxƫ$pk승OGD+뜍7l؉zD=>Ji6'x5Y},|xn ccr3POu.+Q5Gt9)Ed[oYT#-D H(zf(.٠nI@֜I*e[c:\'$Xt5^qXekFnaŕ~kЂaDH%˗'.DO+v89yې%6龛Vhj 9㋆tfc2XPþ>Ay neAF U}RG<63g@t-2Dr?c Jp:"ۓ‚}SD&=5wLkc?omf>$kͺ'0%z?BלBgtGbfG*6||G*D*"3(&c91 oϧW(7Qw(To{VmV 5CmHlrO5 s!MQ/%KG Rn\aJ@@9\WY)؎xcZ@i'[EKQa֡ 6@ R-Z2l3ԛSu mV]Rru8KkI9ʽy{yl9]yB~c,'[lBn;ɅDP9 1!*M3ӌ﬘,x_8JfG 7 7[HV3 &@CҔlbкޅ)R.?/f+hz%GP(DeohO2rA 4| ]MmLϾ}ʑ9Refb!Njen"['QnF6H*?$ &JQ 랼 x+9`[]k"~}ϝg%ieB^5KP_cGX ;`agfG<LإKKEP;G ۝ݐh=cM 8Έl]ھm\Ɇ+nڋiߒlI ?<"F;S8K-sᇗui__1M#[w ]vNi0l>LeBӨ&f3kfŵlxr!ٌ4%N|T (>Dtp5t+lM8akvՕt.[snZr` I(7cCrs׌XrN䌽Ks=¦sϴ6wA4 HMS|֡m mxdmslvU;l[R6l07 TsÒZ g6[vۑ\me O݁GPfg̍`SnaҲJuQtyYMhMHvM4._K˹=^Nim:#smYnGk77m`gr;oĩ8"`푾*pzuZ5”h~d%~,{O Xtn0Z[.`4fpJ"fp %bp&Y^ @0ڠRI ]'U V#; i-mY60u?P5а)S'l+8)ZHp΁ÉbnAG-4RY08B8 OiHwnt TeH* K /8:g<:8]P Ӡ` ;c_ِZc6-ߏ,Е9m]EeHmX:S4+\\Zk}/agZs!?'j+`E8&?berR[h>?^ ]Ӟٝuz(Ϧ;T, Z҄&a?9bw]zXu <؄hc{x*Ec"g Xho\mٖ_(*@eixn]xd#R*`26PtVq[#/O!Tb*1]w@y( KBFv .&?>jV$w;`hH]"q%Wrκ.m- mKƭ)ߔ^=Q&9dܮdqM?āf@wboYmHEe0eoWeD\wXQ?x__aZ k۱9w=@f%!;xVЉS ||E6zZRp}VmKg0PMd͹ʁ=ͤrC:&Ew`%|Q\y54|IHeIz1ʼn0v0ݧW#u36J,oˑ.qlmKu|B*oژSE p -萞tMHV*&iR|V i:]FݣYJ!/`a+iX~yRzXȬrMϙ[[ź\K(8a6av{2/^ Ko`f5Q*ARn-(RP@pTdGo+b%S){/MYkfNJܨ_,YeY2{H-Vͦ߮>XzJcH_;\U2A@:Z%E2#fKY)]H@$ktIUpyONR:,|2OpBo^=Y~l Uᙞ!WБxDbךjK,K33R .kK WD^(a]p\ AU5mgV3 `' AQ~HxLT@ߎ0C: gB\B"U՞Yf Pi]g 蠊LoB]8YQ\+M&1[e;ۥ~Mg`V-^nPq^88.+m)z!Q oIxnLu[^~szt<\)!aMꬱtz♪հ"c|/X4$U`Ĭqyܧ&Zq']!xKRzv*%1+mM[0JԊ{ȁ֍$O&F25 ƿn1& m X8UDɷPP!$HKe$yT.]ZxTԖR~U y=Ńgi j.uvN|oH S&ʪ@Qq|.ef^d˻d϶Ƚ|Qtl3z L<[#v/[ri9n}r%Ʃ@a'٤|h P8&Ne1mw=_ 9$++qs(R|nF ZΨdQUtZ\uZ\eTɥ.'5P)\‹OX•>ry{Mk*y=>@ni=Nd+qw'_ PUDS$ V"I @|qt~j=u njlFw՗Z.s] R}h!Yӏ.,M9,{D)!.Wkk{O ivB2.ʁD(7m K76B(+aWefXTT{(xLe2!EuXHavˤuc5uӋ>T .ִ!=˷2KijiJudmTY-@תtt#E@V {qZo4("P7JG P,f7,\GDr Zr6t`6!׊ 9dH̽W. p9`HG BK{neZ>P;>3dr7%ƐxZ◠i;qF^B%By15hb#F¢< =,5."*$oH: SԾ[Cg<.^2m!b [YIRt4 `(s#WוhS 5a b[KlG+ULFTp%/+Kf NUC9}M D@ jipǙ0ؗGfEO-Sfد@U0P7ȕBp=j!3aMJ3p՚onE4- qS13JRAa@ŤD}g5XYl ]-&J͎O@fJ*#t$dh$-YhJvEg񦑚SP4[I0$x'I`ђ*'/*xВA&3ҠXRR6 F椰ϔHmt )zm[ qUu$DQ2i$0sE+?2pI%vH5șaS /@*^+%|!AzUⴕ@ӃPz 0]TI_ AA XE>hA.#Fr:5fԧ4n8[n(K[Rrԋjw]TSX"YQku9lY*6L]j:̎ 嬷v(Z-jw=L$ru>b֖z)j' ]鍃yV/4 ]0^5w MZjf!-vOXY |ؽP뿰/l&9ڼr/by|t}o  Cף@^h r#^/s፺4}F:.*Ͱd.+|=jKk3.h\R-kJ/+-A͢>QN(J۪eT3 ֛Pүn&+M8E\nK[mGCu#*1Zh\sWOD'|^jr/_W͍o9ƏÉKz¥EXg^ȷ^XUAs^(p!. \nW rز’lhK"5_0P]OFHBYQ-"9u[kAk(+=+܀UWt3;`.EUR @lA#պ Gw__.wBC &]َ\Ǒ}i\ʌK6Eq 2MqƏ! 2eU2UbsƶDȻˉ8ye;'3wyoӾ7kS'=oty_F?l.OO;קxot{ؙ_~miڼc} [N- >]Ppe츾B#>^3c8Sd+C+pUzOm?T{x[Cg/_>?/_ Y'/^o~W뿯_/7ݿWoz *vT)r yvY]}vtn[H|e;M;P~P "9̓K(db^as6`3Xkq/׹]Juz~ʮgSF rV?d?&|ŦKoq0圈۾][Y P/EK]5U@]tx>/:IRf2K@!s YtTeh yu+cِ,IK w)RBAPT/̚rdȾ5l`?eruâY,=u^=K30r,@7^!mVZ ߀]T76Xz#ki<|e1su%QFbHWա0E|]r5aaSdE(|4Ie<嫝2 WjwT!!߀~N6.b^@K^Z^(iR!!f VxD+dAXʶQYc=0v+Fe@LT56lΈSE$>[ZN$Q(#@/8.g1p~h^q8`[>Yg?E<{-`T>۱YP~z "6o56DdWh>[8xN|*$< dACi 704luyKV, j Ih믃󉦉0w͛ؤYfU4X O]!aiCzC6F,ǿ> I&^Ġ$!U]IB(YTox\LDB>Il|ųxӻ姿4o 1ٗ/n+r[C)?><^|L<OtӒ9ZVҪD>XIjYɬd%Ϝ Ժ8U-5kĕW, 90qgkKHIБht, HI#Xȿ*iFņD}o$w*Xա -X%9]1% Zb3sX[wzqP905~.r[DC W&s$59=j^\lJ-Vٜvze"UdP\*H"*/ 07K5KvqݛS~u^үQK}_&WExI%#Si/HP&Ԥ7Jj_ԕ]"hI1-juI'{Ԥt%9 Y_Wp ^r96JVJ:VrMUR+jSGqBJGDJ2DHOUdxq\ R=tr$Z5`d,06H9qЉGۻJ(X#7{z큔^d b-GojskWw,uAyoF6(OfU)5 ܣuܣ *q X~>y?'' <y'ytW,{ }Zege  }&ȨUUѯ"Ih^lq"%4 ~RxtA 麆66SBrZNBK:UOB>RGkiHys_8gIIC>74$Q_.R 9fι*gDdԖ1Om\FDp,d־ue" 4m3 +!8w_T5hxHVDU~IZ"( "|Dd.ɍ_}GDVˍD舉,`"LdDv k!k1u.DO?/<iLZ*e|5Y5ZۙtOvʛkgco|'B|JZK`S};I y|+:~ۥdϟOti0GV.MdR֥:,m.y!sOWw1K|v^b)|w}S{C]OWSZ]49w4a:K).j]$+%1=Y%zؖpnAcv"pB.J gPBC&ΣfgI~t#[o HL6Hnvnx 1Z\1#dr@Vt|::wW7H'[;i3/@;Zjqtkf;@KIG;:> 牂(^<-1S{`Qw¦wk9C?QdVIx3lԚw}WڛpZ0d#&UŲhW FERHjXoҞ(Zac*I i!Ta.8Gx5NuT9SEq#l lW*۔cET#S?kś&l:9*yW4#KB302 ": H7KVS_b =h,EBLIfvn~;3=Am8-ўm4aIxuՂ:ۄ眧H_(`Y}]0@sjMJ5x q;(w衽$w n(PH-=gx򡃳>/P"0uÁbTP @p~3a:A>u7+m$OX#AoYu6s/y78Հgy de< T[, {`Pw%YSB2mXKKnǐ#PPá%>G5yWfdwQt`s',U_;3N(l 8?eda:=gKgP4Q"fA mȼUI &wN.#!)ar6D@Fa"HAýQيe {ND Fc5%;|cѮL`HX]j % bK%OC$z2$XvT(nł czҮW]P;;{9n3rr!n \zMG!54H=lGV$u I3ᶓj]jt2V>s?i̴ӵ>ZvyfzdӫdG'wpg{CT 3ibff MkHyO>㿝2`#83 CEO%Igq 3CxKXVr|ۿHJͤts"fd@l_p~[4}H֋P҂wя ȸ8{4_7ɧ/u0%/x4 #\{Nd}@*&=xCIDHw:䢑\X]z%'| TXC`} iGHsQ3-yrp%U୰| KO##w9EVzmG tX@GL фl%) G] \UX[x"Fg{uN9t>' B19V"{˱ѣ+8M@TOqz6bW6 ݠ}K-pp)ُ0>ZӇzߢ*`݉mE8%0v rƃG3 v`nZuVPnЋ,/*4e)xw`QB'nS8O5mQӦQӧ(n1@}>h1| uwHP 9ة,pWHs)̓ޕ\c\,8~7[OK]diHI)Ra9|,Q'9My.(e)\Ƽ9={IXsK4V/ѱ(HsszG|s""51=Yqw?SPC%h:vC79ꑜg~sƒ?,и FļQ[G.Q6G8j8Q{u?TH[:a"ھRqsMhp6I}"'zf|zIk;-1I #Y%R DlB[^3k%F/c* gEؽiyJQhL,uRaz"uz,iǦi4o#,@97xj{'X9^Ƌ#RljsdF7jA4h[E3Uɫ+X~wg+䉲4[\ U I(.ȦA,^a%::Q5 |qLsyz'SͤxVn638;!}AM RTG(@n%!#( *Ih{DuR]OLCgan5PvdK䨓^H:IY,PZPL7p'rVQv{u|{ɋV8$u$U9ꐱ㘻#uO,u!G_\ػ~Q]T8M4!KARԬl|  !Pe qS:gX6HvN?LvGwOyu,&D!qeJ[ƫ"wbckyG[]NQ#Ż_q@[ay0HZC8'NS\І1ikXd;5T&\N\ =p7K Ⱦ$d̸^xU L^q&'fh^G1C;c:j>+sX,jv.y^m=ɢMo'x>hPIhRlۙSU: ɉ`3=Ҭeq7973P9Sq7FqԽg)juK5l2حrHzZN'#*:@1 lR;S+,np X.d76W'4[S4n{X)K3eMg7f4=DEhny05R 7W3GunDϽS[ znCkZ, 9 Dv?6BCeKSFW?誖Jn#FQCDHQį*ksT5E;-ĵoA\>_yGVpo;ϊ?B]-4"N'Tc!Dۍ՝kɗRէ_|%SHO^)}<|ZSh%I.)G)ßG O1%9% 0O1?G %]Z'3 ^5għȹGx$s6_͕$XɒKy %CM:/ esYMxޣ]"XOIssu? O1q2%96*qWX~SJǘ V%1 V?.$B"cFQ/s pbxS- yNG͍\2 -&x}$ϛږyɀ cjKmʋ^'hjx4&=]L?] uH =O)CmQzh97c@oȵdQ8V\`y#kx*Mu)݊) xZ ֢oT,*\zlVQRU kdœ\BK:dN,{l8Aa)6n˞ "/USRlZۉBaϩb[ܻ2v:b ^T+}-kBZ01([gxARq\HQOi,u1xm+e!CA;'J‹4 %8GRfϒ '(0BޫЭi-D=,!&,Y<>w ?x%ŸXAEm義$uSl%'ܳTah(AKyW(G/{? `Ea>d(0d_I>$b=7 y9QVzY8i] nqLV,jsS@W,VN/B*:i$.^sUKwd|<w N;Y`<8 (EKbhAHXJTI|l ]FLxBRA#lتZ%n# z StHd)~X练}Bt*Iz6mJ}I2սB ڒD4?h .@@}-mK֦S):F !< '=stܩm?>ꟾݷ͘G>_>z٧!߿ӧ3`iZ_??}_7~~_7_--owoX7~쇿߇Oo17xWO>SdO???}7w?ûw|??Ϳ?0{m_%w'_|znlOo7_=yz?/yz/O_~rOj m#f xŮhKR; %Fl(Y;3B[pz@hJaZPQ }S56 o,PT0D)[S :# 0Ѝd?F_#&t{YH6sѼ6 3PM80KºC̘# é|lT {aϕ ,+,6-I "z4 ’GXK4-d Ի$1!`S#["m:PIj4H6X5(Q}@eoLT^Pp]G L#)6eh:ZUv-o`!;e2tc`RdQ*P8kAɄ8VՒeo发c=Db,,AtWI)<$&Zrk iXKR[1葍JW@&  ,FŪ4=5a`A@ZaV/K4׊u`'-#b%n?ABLR2A3%(٠֥.kqХ(pƜ,Zj"k1N(;1Qĸ U'X!їf'l!Bimi4$6YbLr<~pzL) jK違-bdeD?R鈥2{q*.( -ͰV%LjSI$ܲ3w% ؒSA򗮘yqW'Sm^b9E,@Y4T,<)#s!P{amp(@#^}y.&5QQĒ2-[fJ_Xn%!pc-= ʅ&,׻UmpCA$ùP%;5Xͯ(vc;A.Yф*egg/eт6_Gex4qtAhr@Iʒ&3<JbMNBP1d%be€@6XKbV2~m"/4b&#:fS HXˆH旄$;~|4Kâ\L"7eeɕ1Q@T'OZ3Lj):Jxi!ũ]^KHyIEL%ؒ\PB eoDFQyMt.e-BuPsSgnJF4q91JG͟VOmm`DR`/QqZD6|@9bcȴT :%)qUD3*E 9WYv> z.*C\>5{}6'MjS|UȈNj(G((Š/G28,7h5,Яrg%]@YF250V]V! WB)KDX#(O] 2"ԩ j#Щ^E!{hc+Dkg  ,zZXW# t: WL W3IKm̃D!hp -}iM q{ ST Wt _Z 1?٬`3=bfh$!zOo$B7DIK4O|͘-,DW!nXzF\Eou@&-cʥ J 1tTb ـ Ip)P#x%G"qA ()ZSiʘ0d 9-3xU28m9s] 7g ~M1&L~>9Oa, É qR/vSdd!a+`թfko4)b=3l=/W1I$R'c-L>I7 H̲J l~a4t2pb6 #t*цR>ۀt2PAʘ|%R \d_ GQ~$H eDc;aH,r`^W\|m60|L2 [`K\ o5&!@_l)+NWDrƩ0,P)yAob> *̓bѴn9~+uVqԜZr"!%'4E2LVpFAϛf[~PI2(bJ I-В\`RxH҂WH"}P!api AE]r٧9A_w-oL5 CUŪ.Edϵi\x7 Y]-qhj\36n6N۶-"/ҐE+[.#I%tS܋$fԄy})Rb^AwP j;R (KҋRx[j=3FdFU/CݚF4X ԁ,yj⭤$-$,cEQa/6]!5u,RFC;"AF2|2jr'⠉}8;| * CQ6RF\ j` \ s j{ Vm>^`42,otڋ$G#0(L@PA >:զD'9p0gғ i#)XU5b;ӃFVF-ѽ^=jI* ZȡB )&xedDe+SvMCLT4`T7ye 5,Hh&S0u`F)kvj;ĿSA:XG)}6!nsqR-!]d.Xث GU (\qzlY!rh AcP jC@ gL() ea\xXX.Qrh$D/>Jm ; p̑!WHHJi´q1mʊGqhEf3r r0#yT4[֮e 'G^=((҅p-E{ 4HTp@;!"jxSlz9yhf69:v2);0ۉBy+Ɖpjwv,\FN6xH4YjkdI aUٻi7m&XO]#:pys{(!;# |Wn~[bѝ~hN*GngL4@D ѨbP]=`zM5sDcSji.l Uדy',p6(:Asܨl#bI4QlM䂽T++[ 1RK2Qbd7bve;%V҄T1T?WoPz/Gc9SQ,ǀ_[4j֒GIRH`[C vBɩUuA*gTҢ&hii/QX?"w̅u6% {/|BccRuL]U`a Da41D8SV +ElN 39͚l@ 2bKt^GXcPIͲ*,ЂMݩ夐KcY:)R9hKdWۇG哶j4,p:{k׼*QE*ZΝ)y :Ե|z@{^7X*_?>GPDl3d &#6|}9,o\#X>n`yi3/򊂟ښw-,7i"sP>+ j(o= AyYKǙjÞ)-C194m^d˷vPM/~9,/532H&_UK\ǎ mv-8$V~dKy}fM2`^%oUo O2=7LPdզKj*"3p!Z N826![x.R+7Et+}WYzf@*'ɶ||ǒ$z>xp7u8=,D / #TFQuCz'[_:Ƅ,<@R"QtfCIJ(ڛ!y@d$JExSkdű^{1ƈ{szsXYxX ZBN 9Bg7"Ն{gvgFF"Il)2Ni"Qv<8dXR֚|5 Ec/w1yeP*Ma 0p)-y<"o# N>bcV!J@3D> "UUra3˷yws<^sM^j UiFֲ,C zJA+Ȁ o/kV3b8ň;[5;z{'4,y,{~! / PNEր y 9"?^ȻdA cS Wi)7﷉~`>8`C>@k6!s/絙爦740sO_-1nc`[~ P;ĚОGe-zq·g|U}Yi&r|=>zѫ_XOWooyw'1BriT(Gg09l`j}wթxW%*@kS5j:-n1( .8,$%RRDF27i%\۶9 Ɲ"H7O0ad}} } BR{>UWaP'D7jPK$s[}!LZ:Tj6_?|b'Ϫs;x?zJ+(|U Ok/ptC^;C n2~&M"Rt5?WˣO#H QE8Caz3c̙lުɄZm3Oʯ`w \=VȿxP1QTnإ\s8]5ixPB`h2 \][܌-*ZOvSyI0]>\?O+~]^ {uQyrgL.8M=kpG5nWq_N^v)*- O=scmU!Ҷ.jhvU̮* e:mݩ!#Y634fsKGa4.PկQE nЂ|1'e Q[`>!q\;IDݥf iU~jt$xT_1i ԐAA)'Ԭtd RکiniNhcP^Vf54C=X~RKnjSz75j:3PԺ|ЃHk JVճJ9/¼0ɡP2W9=u\̫l  C%O>*]gePq7;2RHydC6X`luw Ƥ6܂Wg0+)IOk s.]q7&CSqKeed6VopQpR\ro_U. 'Tq(Uђ0D ɣ44Yjq$k](ݽ v8kE/RL1/3%ڈ@a{LRB1Hұk_RQz/>32Y:) ፩x*jVvgk sEJX~TPá+< s;c$ ڳhDAF\JtEj(xuv#U$9e&_mfAHz  Ÿv5jݶEEmA-cy6=l?hwMIh6@|}2&+JȊ *]$EA {icưpfʒmUvd^bo!g:Z ". ~TugvIr6H5C@΄9XdIQӓ NUV"4mpeSS#(s׋UJ:R`J|@}$KOVG 4rB݃ [9a_Č |#蠖32`}1]y>bЌQ$MAp(`N09$W/s(0{ϛfq,װ]u0iCdbúlC@`Ə7Gq7᪜g@в6DK/(.Q`:Ӎ8ڕ AAHVZm|[?WZWڗW5^\_ZNUi!EJȣΩkSuE-^=;SD+p1X].c,=l^vvDޝ]fbɂt1_,VRvsluAkQl5YC'M rQ" }Ltc fXtEkd9D:HHn`Qn063ЩsW>VQRSa~@z#v7s`Ť<͛46&B/ʦDK@B)D8-B;4aƒ AoKSW L[?%dϐ?UQ7ͤD^d"ѬjE,t_J!0sK@jȭ^ݭHnE ΩHt3*`e&u]o,=&q7 SԖku+_%%.۝{5NUNԴyϚnb=OLpr jOq?C) srsÐ_2`G % ԕz=h{MhR+|R>3F`sY= KH/N,}\x'7*/t?~eqgwD)2edríE .#ľ+kszEN,g1BBkvWb3rkV9d>EhMMH .\Ùm|v"Z*A'2 ([:pgUb>Yn"z=_%d%C|P)Xި!#gC_(]Y|vSwb&ۭ[E{s$[箄*CZњþ%&#h'JV^fA֭N=q3n żN܂z'yfLK&mI lZq<^Ԑe;YIQ:GҶf vcynK S#מ+q$Olа W_L~@& ͐ qqqa71ܬ䴤T(&X v8&:EwPGx _||槽g0:,QO?[/X@ATN@g2%ܯ Vf #ae!|K.mz/x'TpgqS I r@$'&p}Z$S }Zk pB u`${ȥlҎSenp;u $oqJW4FνvtfA"s."-zzH.thD_}fVdCjM5TU\QW" ?h}4,( !ZTHRUwK +DV wD"Hg/t>CyY˴?KX$:ET-,X7ν=iYL^pyO`~{bڥ$0XodW2 ,MYrER~,.(EqS4u5w1!]~8WJ?e^P9fg9 mK^C t\=I]_]PC$aЇdH$Әc˽*׻iEIb \Xz1ĉF1@+α]mUDL4\R(`5' ob]Lor\x}vE%5OqYjVAoK2]OTuq7qcJmTLdKiokܹ?kڋ:G zo۫o=_ժwz>220:wˮpcZ+U\n^dRIoY!>="RĦctݐ]MT5bRQ{n`OZ6$^jmɀfe] hJtUvZw+U \ww+##7cPf7 ܵ:ƐRO`<[i.^y 6xfEx%z#Qn"nhIEJ~= NKXF>9Ur ~}mwfk VbSOįzn=6;D[͋LFĸ*$jYɹUOL997n鎱դaʉ3<>7Uϣ$ e]$駙\]$_Svi|gCX=Vhzb=o8 .g=rP}d 2g됷ܰo_{ccTN {XbuٶpKQg6?umDLq4w;C,<"m7z_ذ,?^Wn!p♠/K}C k&a ][p܎ *odtIw糣׼[toVoSpV[Z+dۤqyJ;gN_'3(V׉q]^mn+dᱭ}Ӫ$g`U:ٗ|/^VӐ)b홝[!RJ%QOc*6#9i'pڐIzyoyoCߡn7Iϙ_ƴlNbbmUy9SM r9ɉi_=gVj\eo+} qE^Nn Is@QgKNw,ڜص⩪'hn湫{ȜyU\/]Nr!ڵ UUon{7m{o>PgxC]{>ʛ Bww%gnd ڛ9*vHIMD BG{pNv6Y&X#1OG 8(ͅNòGdz5`vIٷ~nY4xXYbX <\:42v7 0q\N[9Cq3 pfp;e-XK=±c%8'DeHgxQ;OC?fOݎxѴFN=*NGvKEK÷_,5^C+49C,x/9)/{# }$ޝBulž|=ZﵞH2ͪ`t[0K# jM'U'~ѻPwm<^5*.QH/MsI_ yFJ5;+PNH'^vE oU}^dd v̷=-2sӸ݀ErEo)(2z{~8f=*K6A-טJN߽f f~ѽLA-fp јCrDok΋;= <WY"|e\v}ƠtfPeJΟo/g}H_}RZ>pcoطzo@%-j[Տ|&MuK1A~7V0 }r|$|YVBڶ`ޯ˜tg6<Wva;(??x}Ņ zs[okT` j ϾްǿBg[YQBC|.}k7g7e@,k uw> Rϸ% H뱻2d0'YTg)cq^_۳|*g%\gt"u 3b_,W"^iT_? GdIUɲMXAŠΊMm0ZJtֲu6 :OMv݆*&6x8I>Bsk1.l::jUMl[as谡[c -|Fe+F|n 4Z&0 t;I\zU&Vmf5"Q'+> I]/;9:?aW%VYo)fc8semѷaʺ.Vb=J9I!*CFR|f+bxݶ=<Ux-n=_#4A%Ӄ)84PI}@hfyН1ɖljaN=q"@pd?F`gpFW$- l jn7^70NnNq54|8OlkK;u unnq$|8Xy ML+K];Ml16urs0ӗr\$>384GqFgz5شg?Cz;gdMWzp@\02楍- > %FۗrPm49;;rl$իF4t :$ynb@ /P+ѫ]9Tp:[8DzaNm>`,zgM">?~x_/_ݾ~0aytzѳWWZ/J??ճ?oۻ^ͫO˟*]^?xu{Ǘ_{ssX>>Yk|+lCci??=<}w;4|x6q}/__$|w}w_-={q|o~󳿟&m_yH>?+"rrZzE0ph>r} R咮w&/ny_*}~u>>a!/}!]/ȓ/4~VZO: uQ{1hԒ*yD t" i:YIVCHklGe0@F"e|#MTL_@*uJLeJت"y55E`cq}~Al1+Ϊƈ^[Tg+=!(p%&S4UjwO5@'._',ET{S u,*1ӂ6\/M薹\.#_vR #9*8l9 Bzu6* cu٢JZ\u7Yʼ6?z?up*ATQR4O뙺rTSQXwv9g啂X uVM١gu%e>ĩRf5 B)0u ֔A7hB;KEIJ貧r%U)$êe=Q7ҨRp5Wc7uLڣ`(<CH:s=䡞Q}~R eӓ>mf)V*:KSpоTg0^`ѭYZgSR Gю/TH꠱J1*e.M 0"$:Ж<Uѧ`Rr}B>A̓Y[@%T 0:7,(\wXKtS1H͓j5Iujd .ŝUjC~`,*P]iNe3YbdhDt+n9:\\<Ġ WxI7]l N Nݫk@A3D-P9niS r⍶GHL'C@ӷ5 v^ddNі&.׼8 K pFZ.f&{FO69ham4~ܯpTiź7`vHFV=m=S侑TO#|0B@i"IUaeDCj(TUߖeXI31PDyu[P@'Q{,Yo'ڝ-׶VMfC?BNHH(a.ȁ#܌lWsn֗tH'5 Q`[_DPt]_W]\fk0ZrVnOsOH)0mcԶ%45+| ( hj5b֎̤Vc).V юHl%驔Lbw5nAoLh v. Ʈ/ ۆQ Hc&2€VOo71B闗N _aKzLlGH\Kǯm+ $0c+zXهפ4źs+1;lTLe) <15xl)f7ڽ$B%]YRQkJ1Kg>Q(ldubAlnM;0~ֈ,v{7M-8" RDQPDq'|_Dy1)e-d*H5+Ŀ6e̳_@އY7rкgQp٩woo__|5Wo^'%aӕPZqט.t5%-*ťl.reԙCuJJȷD%kƗ&7݆v$b֘[(';n.Z?Uԧv)Ad3%8#*5 Tuv /g˙)}VZ]w;8rVi׾n5MKaH\ ]C?ݒӺ߆DN؋1ҸMrє)He62G>qAұВws$ 75?: B7K\YB٪Xũ"9 ޵9p1&5vR`q~Z liW'MxnE IӦM{M 3㴂wC;iZIh\ 8$-Ij7^BZ}Q8 B:;ZMb!'}C\XN)IqIU"94D.6L.n!%s#4pkZZF[HVdU+ CG/_Um;RۃM3ʨ R@(:Z[6]> {X2nr|vsj~Nھ\H%\xd`Z9r[c"_ћ.Ȅ,Nno(7IюZYHJb:._).#dzR1$/4[Pٽ.$&TIK.qf i%$]8+Ӹag(GuǁIq_ RA:=n=?jSüEizGZ̋`g~%eec> ǘ34Ff0|uU3uwPCy#SlG2H(wjH?fw^6_3k=Y .]pWw\~}zrOv^{O/$~9B?[Hgt͙͙xBriҹ6\ ./2$@P/μJ] [0216mA,)hzNf"#|.&P cr4 egE4@!bL)a{ )%ah )Hmv&[٤AGۤodhK?O2bdslVBՖBܮL\l.5biaX'X:=69FeAJߌsF峦yEΩ1RtƗ`.fnv >UZ8bRt"0/4qgu&vuo?V7MZ DU6Ɣf&W9\Ys3b= ޠ 45uۂ!) Iڑ`ND\voxfe2xkGj~S'ᓵѵwmt+\ l aVAV !l\ %xj"5,nmcݸ[]bO/x*L۶@ ccKl4_AzTM_`$4ڧHN=lF+І۝z&IÃd>#^*v.&zr/QZEזV2fr^ `upqE}+=5sT:I@j^˱6cl$\T|aT"Ւےid /4& P?'ޤ1-E=Z7z8Wjץ c Le P(MR~EӌT \潶by9 2L-TSϬcҩ;*?E0E'3:T PdS",]X;gt2޻P- hqݔsZQɟ v\AGh{$Ǯ6PBR_:Pp. +XDra3M=Q)xWd_vu(B0sVZzz9&MōɟB핫svkA~e9-ToK0;=mʷ3PMMl&S#tT%\Vf8b.FC%V8,ՒN8l]+[K[R5aȴg0LafE5 pF2// ҥf%Ґ=.xּdO=s L6[ 9m, 3MWԫ- ϩa7PBY@hmSȪ9 r4Y /n" Nuu< 6Pa`v V'iktJfJM'h`$R1;c&Ucztz=}n P6eΞW]zR7wc v-iصceT:R~XE_/N`&t|??$:?38lpQB Ki4bAT -*oGZS¶{x1FT@*GmJlNȝ"K )R o֨6Tw NA繊FWRAü{ fHukR1".R")R։EZQ jV+9kgizBuVt\yHHg[VuSP!⃩ oEț0Iԗ7e#3{iBdaEsd+b6j?@);&|exG .@6FՒh͐Wڢyr|B u+T*9n(UͭH[Yh%B[WÜR]Ur/LB8}`M5;~ǐC1yH:>iya }g -m%lKoL*.B,Z9MVrDUIx!D>w6T/#( Zؐo8IeH]OZl{ T{qӐҔdqE i9;|al%Et75!Jte<ɒdɲ I-`#t44RBu-"c6ܽ" 5R.;k; _RiZOgP\>p?82+1ep`jZ,@;EXQ[$%2q&0AdeS0HZ kGCK/aмD&eʯBY$o5AF J5' rw*FtҮuCcٹkRg(iפG)AreMIkk^C! ҅#B`j`FB,jXPVh 'R^jc>~ fH~Zޤk%2NB5SZZ[̱2?I@_kH[(]JU\9z8[( gҧ:;jSfYcvA$ⴥM3= aTGQ|W?dxFw5=34! T)Nþ2N΁*[hRJi.QusW9VP^ .!hR2U1V] MjS;%jZpUUk] g4|j\x>9 _^cԺyA*z(&z\(lH'D6LN*=ފK4>H@9Q}(g"T6 XH!tu2$%5` {%6aZebk',]-FT1Բzɽ=fHs:$3 S';\׭g!ŀĬ+hܒzCȩb&c9t@yKy'$h08h%ҡ !΂V)k`f1 E}/&UmD6ضEm䳯ޟ^A+TІIxOTnyxs#R]Pj)xr\jy@g8brN*ϡs`)KgX¤łhE¢2뙎ON-+cY$쎔|t얔4vK8N`]k4(>A uRɉ!AX&-xB m)䈏9RUǴ5tDju'CiS=Pr\zO3~ͳ1KjՑkN(5:Dz rEX K`.6ep"zk>a' x#Wy8R-X3k$6QqZڪ֕Z=ꐵ7ՃrfK bIڙ)VeDKx 7b' njsKj&Z̎,*:upz|}{$h ޝ65MJiP"#f4M@.%d?|Rf:p\ >d~H5A*@Q aiu KҾt±P(49OGKA r-m]{\Qw N,Y8n(jMc)p5p/ ,I8;R~($V-nrWU MaZzϸBCZ,]YoǕ~!ڗC˲XrdHBL uNum]]}JqbǼvWW}PZg_qwbɞK~R$퉛 }%D/'O˽‡y!^m{R!=k#'%'%ɓ / ϥ] /|X .a˒L_T(CT^>B^Uqc>/qX9?W0\>As` jݤ=[\[^-+D\8xEX,Yi7I0-h`,K q B2wp /$ye="{pn* l%Kxo9H`9 K;ɗVRr 酶y~ghY ,A=Bd3 LI&]P%{*dʉWuo)pp,$ d`?K[)J-XDX~cWv^N@‡3񎁕; +E(NyW1,_0aIA1yW]wU Qi; & 2%Ip`6ĕkYdM #/=WtA&N@FW1/p5Ihvu,RUOpQv[W!tD6(hH&s2.X9q'HG1A!$:_@`*!s&n%/Qf&*Z "80N$  F556 -H'49`IMzv'Pn" }Wf@ArբQ:bI-eg% lV)H3*;s5Z$Ae€#GR; VH6[1>Ёm.`IޑSPGRP܅DJNZÒ'<vmetph.c(A.ITK$;CҍNPCtK2Z% _d`Z2a` F-=/tɝFOW緿>~~ogx织77&x~psx{n>zXw]sw7LJ|͇_?ǯ_\/~o?=޾ |/;]}Wo:}Nvzzo[?%AԠDAj9]&!8v}Kv U'kJA6qp8Q@9QhS"A7N!0ё#=X|]Qy7߉Op O( @C4_qc9'c&w)㚬hHZ( Dbe~l6gW{6LТ<HE<5r5 1|COY 60J Y\?8m]} I ۃS`y(p)Ȧ=Ӈ&)Âxڣ(/dx8xƵ@TeRm>H5u~Բ 9=R9S*{.6fȁ3O&XCs+"m ,y3YVt( 餳4F ^3)J/PZ jB"wA FO Di8R2R3;PQ`w2',A=Eg= U)VJLj-̈́>uBSZg: 4mNy\ߑ 0BxJjK5\O9'N,+RQ09miG! w'KA̎kY.GP?gi^ β 6T0b&[#2䩮d=Լ)\ᴩf0s'łs_ $1Qw5fT@"9眲u\aA&S43 |DmJr= W]hO@)O2rzc@ˇZ=0n#6 5 T@s xH!MVGK_$χ$t`Ǝ|)#< , HKAݥ́Hj}806W*I紧 ٳ2**Ip  FlS*A!)[Q(v.ףP1\XW4 ^=)i6Y8<’( ㊐qj*F2")+adc&o[[te`!'*M6drE"ԴqE)+wR x㤞,d"jVWٺ0ʓ%&h6hB}tH :DԼGuMY":]>ަ/}3=7g>aYgi7/~.ǗKs?=?n޼mYm9ƿ~o>?}w}6{ψ9h>?~\3,BH1 :Zoy]Ȑ<zG&˻3\g錩 ǧIuwFˇE,*]3MTM5~b&=횁\ (} M1u}/ eA@=.Y,&[,N o\N桧t7T:dc.S0l`gx,m*Y+WhJs^)K#h0VS{o<&ی><6Xت (jS?* ẾV,@n␪b@};_njh_W< _hp\mDkrY }y$4KN]E(tH/Wө+/ N 2mRްI879]xBb -_d<`&2+ub %cNPQM: 1ж-JF* FA# @72qevjO"J@sã k*EBƹ95Nm1ҩ꾉z[^]z ـUTcIv9+LyjR:Q?TYxjY׹Jnζ> Uկ,Y!PEdY2`IlG%ְ2x l-_S2zyƕZN%8qEN0Bp"Cȶl^):tZoy('ߙt%+lxHk?bt $m&d_`J8rڿZ6dSt!"ٲL:өEƱQJlT[ C]As蒸}RgheH0$VLU[#{LA`2!%\=ªf*ˏl``#TlG%I}HkdBkوT (H E~,*ߠ*/ \b!0)tsb% b޾6P%[s/,}>ٖؖ9#o̙u{`[\k@w{yl'Vyo)&ƐV6=UA`P2uJ0.Vra#u)b}}dLӇy]/JۼRlr;`2DSZ檵oClj+G2C_3`xi QWث=7V֪Ƶfkp"A8 ^K n'wI2B[+[wzmI[V^<~ȭp+)[&V^??|y)fM1u6E8L\}z]:] ?Q4<.rͧr>|{*n?} {3*~`cEB#êZKhvjoK"FyǢmAcU*B ToJJührm@CC5Owށ.N[Xg2Z"fdJ5AQ':{2,vJ,6+@$|m1[.ÔNW=e[aT{O#So[4[۩G\eT>][7i:ecohN_P'v[b#T|Hyʓߗ7vT/gpFAv,U6^c>rJ,«`ʁ=d;l2+],DzV% };+.Af:) =ө"AMJb XDjdb͌ 432nrCa.Z ZA\X;@h8 9Ƈ[Ն*!ju.ܱmRkI{~{*:J| ~E(uF,@Mb9pCaE*+LbqY+5#Ä[\RЮ-H5K|et2"? 9,W@9[5WJƿQg WZC Fvt: 2%]^@(Pjob[OM&ci9O!zSqP'5YhΣL8H?]5yDk2(]6\`u(d7܎|+{$_X ڳs*Zc>ož oHc$$"czô'*LL7v)l[KQ8Dp(E*Ǝh} kTjN壃bi6`a)6(/l:W`6\QHQ)&E&,,&a%5-z8&(Ϣ &hcL y'n=@[qفIEm; _/ݐgݔo"ҭ4e[2*JV 9hdZ&T6&;#E0z[9˰sH6̡A197z,H ᎘xn+?.*46񪳶JZ(`2:| *SqQ<. :INˆuئ'qi&Q̼+y5Y"ɓ_u:R.۔/΅}AYPSA)?|[EkgR\K1V^G!GsK1oc> >OGIb5#k>'V`vL5͙c/ kGUU% Ͷ=fETQ~.sG ,vEâJBaxJ5tTAHmDK$8y4'oTuV v.gKz+HqyH2*߁`<AHry3bvh, HI8fs^2㜃OH M*'![RdAy ͅyiwcREu{Ӏ%Qƅ=Ѷb<6;9isrѳ^d1@  #iy 0d/XQ,GcSj#dMv\C8iZ9"wBܣ ` Q y&`,<(aW!.G sEƢq4)@MFr%NiP'K.'-]"^Ap4Q9 NMC{$Yx UcŀQȓ:'ic"$%fIO}Я8ۊ #`Y>zzFTE%УS_:MKYsG:Tdip * ssj9fSŬf'xyY k`Rr Sjps0&4T.˕ ٦qOԱqI K((l; 1$473Shbz3'H1 &_eGCGvn3iF1 32^}8 g2EUP{(pƼm ,CtebcjZqK+e8 PA+M+ZsZ%gxHC/o' z8E|DВVYh`:a8'SKao[og8Eaob(qr1T3PSNu2R(##caЄ8Z:N5ɜf%AV"t$GEK--ChWdh rCTYP#q%/@)0 L*@QsZa-f3# uO09QsbGiRfX%4P"YmIq,(? cdhVbS0 eN.ˈ #a656O<)frr_6`65[t2=SfcyD4{Ru"dU3@CN!?T̍R&9Yp Z2RyE6xFm;*70=\nTآY>rLs4d\alv(bഡ z~ Û[k)ҨzמB|2⇠%3z;OeiӠsXA,mavrvfSZ$a9l{&0Xn0ӧ+?4Ƨ6_6%oh/okvh^n }xȘ96Xc2Ve#W= 3`T $nN"Oll3h Tz0ajyY F_m-pX\A4ȴ/=TV{5th -q$]5ypf%i-YbwKz#4=LN t&jv)8hMnjBqTuPq"lw"[ GuX"bj8D nEjpcX2 f(V ,z ȶz01TS]1 hڌ-fFA{q۠ &Q[#9a!>f{-|LE6ՠ<7Bu+ o<30 ]n5Q (v Xc7:W;y\N*S lGf(\“-g9aYLbJXƊd'keٗ?t:7w M[2\XUF[4wFGrqCrSoWnlxSsL B#QT&.W7cItTzdc/mjX*7k%hwyn#H lHl5"?Vvˌ8Dw& xpfdK@b=z"Ѥ)?c>p{zr "\K>mɻ;o`bBV~w U5LPCϲg Ilr|߂w^:X4m]*q~:;=ò  )kAAE1Bz ف5@k݌.QİT,8=of@t XX.@/ y:̯0HkY3p fCjov]<͊|O2P6HWL,3^;abam`\qEWp ,@xio;ǧ*PɁ L܁EY(2n)")WXܿfcUbs]5 Њ+S1{G{ :pBL( LK)*b+/ 6!nJ)4SglO6S\ tZ^]yQՁD^SY&.t5S1fӷr;9fpT"*tXjq:b9c? ͊JX!]`)[ ~~ȶ׉w|ބPtW }ejW&[PHrGH[ \:v$ANHEI jz`I_* Y=x)s\3+ii!SJ$ Hhթ8 ֳ Mړh^^B

ڈ.\=>>r)oz 2В@+9@/[e?>qK9v <s_p)pq?8`UrT5O`yp5(3oz|Y13@ֵu Dū,,u*˶h1[ 'N=4:aҨ_)vjzzVX?&0Dѣ+vdkء,:u7)2PE|olA>qUH2q-]vXW~>mecnv{Ălz|j*E`ENt:@1q}Q\~Զ7my.%3ѝ꧀M Y][`Mn}ks%v2PDha>ċ%c݃CfqǶ*ޯZ_U;Զu;UQ! v5b^\v[3XBCA-}[3?'kqp,TCQ[%GC8THډϠ4ɶ$9kfUūZF=Y.Z]/vyl4..3kuuk.g^s{?an=6\u{; nWn\:xmav-ݾaJ5ۚ Em)^|j͚ML7ܶɚuL[er$ ni. ~niauٙ~&~\&vKCGΧ> 2tYѼeuav_9Qwt& -{w>X{F7)x=jMO5ҵQn.bHe- >]6o_g|nWJnWVuX e[H-_wh^taYccOG7L֫g ޭ}?Antb 9ĢԘ:w 4ú J#5\ ǬAa57Tҹ+|[c*H$ZÒ91uudàBv˄Vlh ICKv#7KY|cĺ.])hfu3(nP){@e#t\(- DO"ѧC@&|fɭPs:6Srsh mѰ- 79[gamiz/ U,1p6/7o? nZkvhig󵇫ʯQ4 c34T~ᩰvBiSv&4`p#}@qk̦@TSkUwl7vzy`|"ڽӰwLgfH6j<.ΖvL}] oM-Q~gr{71-pxzGĸMi:9Wj|4ݭ%` lv/]$n&g/~o<}bb=޽Ǜo>=/߼٫?c1F?vpgyǷzۣz^˯?ryq*if]?~zsz?~?<>>>?˟뛟~tͻm?I>>~]Z§o^LJ nEz݇~៯w횟^{W?~H?}ަ>yz}Ϸۿ?\/z}OoO vmH :*/Lrp\|/H.^/_8z{_zuY]ɠ´ _,j73P:`f&qpm_p ǧYjm۩}u%cݲ폮}`vEvֶ7 rhZ-8VE~\ZhL&d`%[n}&Mb~{zr}Lz{U5Wz@u>=EyC2ǨH_uLS_H&[ŋ+Y6% cl7j#dzKp'he 2zYn(8&zȖ/wi!GfKOk6ڠNQ qouX"r`+t WԱt2@HN9PWa f5"E%-s\/dK/;~_p~'8J 1 .{$$u(_p.īy-Zܥe`sšݙT}6h_"4Ft}-f!ZkO ;y"F=m>mL,oTw*72C9뒴PU\LeJ 5io64=aHgJ*"D}x 荪M"W :%"YkNq K.1Ә)TZ#[^HlLh$[/ew|l; a(.T2⑝) EMy HFIzyϞ -}4U1[9& d^x\ #@qœ1~s`wlJLd"|E&J,ZG榣d`NޢB"ԡ/:-R[Ĉ.?P;t1RAh@*T!Z˽M[ҔW$Ksb{S"Ț~׭ |^74Hk $&XϚUXlve4?ic3ZJCoT_FB N<PH @r/?IUo) op &f^VQDfpPMwd͖R)&Lnhy%ןأ&:mYrL|Aʘ\/d-OO͖@Aj= N dّ/ CKMrHuTEC:!lDrQf%!d x܊ͯ󈴚BLb)IJd-DQtZv(頷%겱1Uf*hmԡl(rpk X+Jkxnutݬλq"I*eW/O5IeRʛN7H~~ 6g4۬$ϏJ_=]S"9܄Q29m]2yL#yIq Jd"@=I:YΌKrˎl,,hUXXT [꣦@ro-㒱~'1 c]z)(s|aݬpR;t\dh1zv&(_0mH e|;Z]c tZreY_K Ҽ~{r&zS'ET\_{˒(jػnvNw ݦr3͊ii^9HZBfW'"BXX%a+I d" } ]\Kn,}1}J|M 2RFX>%?t:`%PkhAa4[2ٴd8t9 *p\șXM}xl%4qHsqe.X|߱1f$87~-iOJLi؜si NзTiBvB+Ќi-ks-oL-pIyc0 ߰Yprm<$l_ӽEI,۔c2~l+X-Í;ͪl6m Ekz%7뀴Y۞_KT&в-sybq55,,VI`f;^㊍zfӎ]²l!:nW[I̊sq#-iX>+O\膕f}%=<[Pqy7Zc)jrq^~pXHki U;O\'⇆SZMn疉IpMvϏ5Wea{@w"},)ۉLc]`Ж9hgpvwSs&:*)F敪t!\ff([)&Xz]UJ7gg@ـ\ 2yu( \mYÓ]dڙ2,Xk SgZtMF.LjC=0lm+Бsk dgDJ:"$n>s6CE[*n6YP&c7ؗDl}um֐x$uBWhxB,ΉeRcFTuOm;](l-a.Lr%ib67-u=Ih[.i2&ώ:ַ5q,km5:_z?16zw~ n˯gL{\R'm)zGm`eBI:]ԕ̋6.^ae ;6AM~ Xl6z?}VI^@"Ya7 P?Bf0*"o{ L!x9ҸvM,__s-\Nh=" a"" uҺZPx=\ˍI pbTcʭ(nB{zH{m88fyڈݼ@!KZoabT-R$Ԫx\04Ar z~r HedBС3Qt5C;*KB|U$_< V5C:%C`!:99,Ow>ׂ0yR;> 31ZvXu N7]'XIqagsMˍz. 0wb 5XT}8,<֡i(b鰮27{<%%/B$8MN]Uf2R:FftJcYLA` G= LX/wA<΁\ ^im jf`Dh/k2NũCS]g9;=n,[);DNhDLo6HqRDU;Sku'A5"ؒH(C 0dSEH37}kcⅹFF2Tb 9γYR7f',Me I(_Dq(޽ Nww{ei$iG :ߞBG>l;P[oV6 9f Ș4œϮJx$H8Z{nlfL-յaZ{37I70"b pBod!6l=q[S9 K-=aa_&+ J3thⅈfc߻q5 !#ܓ3šW @үfb!\*RH u[^Uu3Yp;=!#|8 !X0XtHc*C6؟HuF["&a @ӜX+[DO=#F8@VF<0̥bũ[;yzfa:Z#kNR}9e s NN8TF&5V{Iu.lgV]ɠtSqJjZ0U1eh35AڃhPcFsC!#4|Dy?~BUZ3R`ɾKM92M]F.c\IҤ' Uv &3z5F"& ŹJblѷ߁~[n sI_VΜynd2X -١x+8:ddP r/aIDz!nl9(\Y1:eLyf[ Z8ڑ 6H:uuoP:Wڧ;Lzԟ鏗b#ų_g\yܯ.i]Ml_,7 3;'7e.LkqY=BPKg-q؂\2? k7&f2:0 \NNA= i ӿUжEqTnL*{ݍջ5.y%G(L/}V!GA! \-QCˎɷo{u}*lg?l\ǁk+҇HC$3 Ϟt3pƯ+ a8˞Hz50ӧ%V *%laB8eȊP su- ;ΰ1m녘…Xڻ0r3rHJ(L+̢|ǔx6R*yV8޻m `C}3vwtʙ/+mqTwyb"z6T}ɵtuF_)w2N71OR*OoR].1Wʳl$x-ig٣5Ct>OǶ6/CT2HAGa^ ?qC)NfcMEc;{dIٛqy9\`#i~K0>֔e,Y<ї#un-LP\c~%r d v 6hP*YW\A:r / var Pb3W7wQDeotvt"% 7xS3dғP֩$UҩL:7R]G8`OdȮi0cp95 Kq쮅,jLVEb Sm: lG#ɖ-̔Ro'" cr"_IO E[c7l("48-;]8TF*oY\m Q;N<u=;(h_X'D2Sg=:n!ak0Ҭ>I 1|xgin "ԙ9/Y*iY'wK+sLeQ$Ne/ &՘YU& Qߌ5B3FEWbds2Ad\uf[%o.ݮ$M]T#>*Uxl9G, -XaO>Ìv5\Eh]^_g͟PCG h${j47Gӟ3ޒ fb,!\ًxjS%W"ǜ5K+Tm5ħ5Ƨm1k-dL>UsyZ-jԼ$b`sZ_+Y0U2)8ăV˽>!^QJY85CjIt tNR{<!Q`/LftR 5:(H靅CT*X}P_Ұ~(O0Kz L%+ *SVzLtްYr^8;7@2(IE :}E0]'f7Uqy5یW40ln=?56lԒRj?}x~yU~T7H3=xgme;2۸nTt JGWs;=v:!+my% 2=}1Yj W?#ٖ1\M =cE|_9"`9a&,v1#jFhn;ܬL*kYq2nZ(3.k- fVb԰co`gpS+5n*c>ʁ -Z>wfn]M373?K%čvXKLAy笃Pglʴxļ@23f@Jg*+NZ!ray 8̓}O)אӂҫyzUa|4YarT{2Yͺ5f3pZ=ur3@5n ptfL2m'˰fS##`"ݦX1$W=oتJ=P\"[͔#Ӭ!WHpjX2>q6Y {"MqIGOihܶ݀^d^ѐ+%!ƭFس?c,rٲwp%L%a_!3zVAgBk[Z&4Mn hX9ܑnh>hp|V̱#x^?14[wɺ&e1Hj8Υ]N5v3=i1cX~k!]gRܗC9~mh%F DFN08I<ɜԡGAQqGmqYhhyCKSղ:bn7*!@Ѝ"t3|K Acky"NPڱ=ExG).5CSӍכ~IvDDqp Snrlأ2 <|fZ,ΊҶSRQja>Jd&C [` OѦmmoPF%/+`Cr ^LHLh^SO5ٳN8;Wu:J'ZOmbY|)GE.)\ RX5I".\jq'WZϗ"mrJ` l%aS^a2LG s2?rS!ڡ;6v. z4emΆVHgՐ/lHE$UsGVزФd IɃMܼAx͉N+2N:_bႢ>55h7⦋jx BjS,8ŧ/Č{ (rf5W+1G;٥т f-\]!83b&He5iAxKEJBSeK(ULe8X#[PJVP'RͩO_cZ˻Z<8>ȍ4Qa]8i "$N2==Fb{,t<2bla8~6((i(ZMRf7Hb gj@_pu'DB+[j9p\iSE+L0Ybh7떛!tlOo;d݂Wgl߶ة^@_.>L|wOVWOv9؄w_t_o^~ӛ_>s~3wCSK?#+(d1 VA+3%_ٶR/;RgƘЋd$bzJ :G|w+ӹ N hٞ¸O(Jz_AGn' *%!x[\*>h"xouNOɝZ@F'GO=:Wa-ςga󜖂(ਈaH`Y/)*r $O:>Ҧܫ Fmu1HC'!Y8C(qId$,slxB:k!VBHL@MÁPAB 8X4 џH0wPN85aؖ̀5+ųk<\9.MTld 4dreHo{ AY>H}}?Zo+tNՋLXHtAN1 PH?}g@&TVjŨg^~CEX_ 1sV} Uvv,\NìZ5X.W:'-s zO.9WWNW`6\B!{uis5>bC cK4_xJ><Ҁ\҂\v=)tuu@}@`Ǣs֗08$ސ`WXC nQ} 9Kf54\5G&գG7),0ztC\10`K\i~ܥPW065,R_Q\[` um7 5/a,!/1 5T;7ԽM򥟂pu_|A~Ex}S,"Ç1y#7&Ta6<(tR L)mQ.AxuWB62%!%Zn>?.JJn!Wqi-"okBY0 VIZ :`]AÐ.x$1(ƀJf$yJI6 \ ݢPʰKLÊle2B_^Wo~|Mx/>zQݓ~xnY~~C_ܿǛow_po7y ܹ?{^|O}[/^zy?JؘLJ˯O/|O?~ͫ_޼ o^޽o^ûuܛ 1wrǻ/W/_կg/>_o7O?o>ܽ{# }ɿ_z}w믿*GtMBoh@{oR}|ClS:Z%=ӤCq_SY*g-}yyI UT X9!TE[ou̜7kAY!%Ei$gQL[qsb#0|-.s:I&sUD&8!:uMxbsck:AW0?^o<f3%2sU燾tNMMz|[ BA;@\yjISI ϣ[OnWSd\VlY~a]6-fILGp.L؃)Y&jb_,YCR"h u-UAq3ni>7*{ 34LRJ!kBa꺆pds&7.jZzoKDZrt]RTrq8mDdrf1u` ESQλAdqN* n]"XZiVeA|7fZ΅񤧤ܾ&# #]lQ͉RSgxAN%$o'cwL56¼MFlfnD/RR9h00F\g C%+1 vR@λcrE} !Y{<6eAl_DBd 5N-SA ̵tC| qf GMC$M;e>&[?b PsQWs]5DQc};CrqL̰Taݑ͌,[xuS'ctm)AU9SkC`bKbnZUgK@c4rJ9jF ])cО3I&vuU+V+йÖPٰurQG׋Qs-'|2']:bc]hf)3I@卨[7j P.KMuD 86H=Bw` DTWv !j1a7"E 5tũl=Al]{tjW%+T((ylb2R lݑŽ Sknt^]MF(@T,tX>^s3u*Xr(GT2Q6?IM^wP.^?O91Ka^y?M={\wc_}6C2P&2 J[a@VE8Q,aEM%O?\bWZ:djo1TfQVN@]z(7._5V+h SPS-_ťzgoyY6UDQ/PKT'8YS2\lcHyP y< \De92,i onn'*B 0-N4]{-@==Uv;׽<ƔE ,&/w \fyȪ_1Kps]gJUdͅpKT~<؆Og[gA4DXbS.ccPڦKƉM-SIRwƀCޓG6& 8H# gW?|4sBs@iYaƶ~L9%ž%Msg"`\X?A9i ,J/ZUVm_%LX. ^G_8qw3uDDkRe¬ǥ#=5r$F!~)pұl#Y,k3{Haœ*/7k؍] t=ɃBZ-ա~U\r[`b0xKVG%m2yQ&#ON>].+b?.MԌoiŐ[Zd"0'{uQԢ)#TL[5vc@Ef; "rjK_[g6Ϫ( 1L})fn#,nT@ҁw4B/pM KI3Qp²LX;F(R8ܑI:t0 QC2 TuGcbx*F)-!^iNE$SB˒JK {+ ~ 4"eXIXETqY=`|"6w]!4lF |R`$-TKi*++be}:;ŐXV!OZ|[eܕf k"7 _Z\Cydq`X=*hpcZ GXsj(m v3lCh1!Wt7`$uLεNdlO6X+Px'?+;<^2%7.VO1lF)91%uݾ@n8讟0z[Wa\+>XBtQjαہ9g8 g,s L:){]Ү2!M>5HJnS 91&k9ׄ;w<03YDQQ9ATY~OF s)ءQbV-}$p?* OoRu548pF;IB¢kѱgZb a )#*/܀N,#dاW i:j1J[ PPvXo2m u:hH;%ÀrYS+"[lZBCc6C ~ PPSŬS\IR\۶@.K)Kk#Ue"{ki4p[p(37 JaЄ痕rטn L@஫Xw ~\Cb%5оf[Zֶk!f"@2b}74Qt凰^Z\ !ĺHYPKKr/jt=.(䵅,'08tf{hx|B)E׊)G1 aDp] >'֑>T( MFrbQX*}mGe,@=/"#e$R[Bz7u5,jBֿ2^_=@8o| Ӟ)mz8M3ii/_kXxyA/ 1, fVᤐ&¨Lk wL&]gT).(J/"9g9SD`_RP F 'z;(fƶ+TG\)NYP=(GE 1Je?RSpv'sܨa#ul0r4[6t˩cT DyKJ`[0{堊(/2#І*Jݾ}B5icL5Ǵ~A4WVv7@9[+Ek5fy#ڧd4's*(bn &Q3Y0*b~-_u tsO@ɹ?]X莸ʎO kRRh-EQ ob^4(8K<6дPsMkNʽpu%{䄔\'edF m8DS8-׍lox"ҴHsM^en4Jo(IX V-N%keCY/zh0yU]WM Lh פ|6Ě&JgQ/yp9MQ';r4:'ȜFM5HEg'.-AWJQ׀@7_lnd-=HdddQQRkz DgUNN)/c\x- qXo~.n2_ku*QC-w3)Ƨ3KFT1K(QE+ yJ/Tvs!Q#Y4x$]UBk :5jsM3mQ8.ͳ4ˢR␔Zl4ꚨ8MIJ.iJI䔓3~O?;-zo~x;f_,ݜR9ɓO_<}^?z|?Xg) C< SuKaCfԊwP-q Ҹ4/gibIbhYTmuJaK tΕƀ<ѕж̗1DdK*K'ckB#U@e)*@aE,FB`> ʡZfrbiy9-uZ=;; Tm> U`AnS$VJɴf!`Ad#QZ2<5;g;*P!4`0oG3V:SA]uatzWL mLmiEPrcuE#P b+KD ĶDÂϑCoATUjmScQZ<&7 j< K߃9.ٔgLQI23,_"!vaN_.s\kc^o+]ؒ0l2)F> 1hO",%E8B K ouPyLs9 fh}@JnYpdl(2Str4JPbms774R bO2# AYpx'H5sԑ\@,$#M.=)E7xՔ6 ~IOʽ|CAp6xS1%Kےcׯl zߦIIA8eAZ|_c(1tZ@JC9q3IYt1hPɬZ.?ľǮªZ!ùaO(evvB_ Fb p mdPKg}O-XK47G92!Z ް%RoCCڅtȉ|GTNVUM%`~0ֱ6DfT۲Y`1԰(x&rcdUm4 QK2Mo,G xuز](Q62[:O6Xn!ݟ!M.3vY" WORzp$Ud?ZI¹g]!mTO}ګ ~(䌴{{=#J9c{LH+ jn܈@-E!M)hqCYpwG>f=n$cBX +"Zq|0 u2$=q;ۿ1w 58JC;FtFK]a,#f>b"A[2[ %Ƣ)LsMdHwnd* ZlI&W$=хYx^A,|0ߛ&Ti>)R#f:6;̹m +xu}fIa4 cZQ7m%X`'v;pg]z<qȭg9P(F"l bҮ1077r=yfaQhv6k]CȌ3$roP[`ˍ 1 08 h !{į-} @c 3L{! IUQ0ҚAl9q}5$nWQH}C7dĎ%N@8= Hz ;Fp:0d3m1^;J; KB%@RyJ3PֺG"*f!ѹ l?RKAzhD?ǒcTӽK}(>?)}w= zfgoU % hzuCCCˍ*8zϝ$ڳ/P8.s@uw'M F{8-ġ[ muts=JB^㱣$:U]Bq~^/`XF;?XZ@p=2wtFYi"Qv1`ѡըFݎ&5uD\[b C/q`ݳXnrH@*#t$ܧuaՍNQpJElXdơjf QiMT5xRr~93FzXqh',WVmU&e|@{m7nVRZhG̬͖G-n,O[<!劽MI击w=?z"'H$6%?DHP폅hmRi-(s!xFh~=]=Wz,"4*ѵz@E\[?gU7:6L+C5Q3%Ȳ鄞^(˔<)+ ֱ45؛K%"GVsazJOxc\H aC |ڍR[2-Z͑d}Yulc`|(G֐yDɩeyWd~y|\=:d6o6ڶAaU8,&#Γ0$\,z*#17߻aRQe%+aVOs# a+w^FfЌ`mفx]]h?\2N/XvEOT٪hK}Wo ;-uquh?9O* ϭE"-HILk ݺ5+Úa5q~S$ őo6[kkKܯ}cٰiI&:q[Fp{ܱkz{]Yyf[۪VVaS=_J;uy]ZbM}Tw'rklXVE#BfSh)/s-epvGJ (Ww9\y%G9Q~0 ?Ġ0%9R xTXcόSqRFt-^t5|Q}z8P1.u=\|~l?AU9)c(Pqx0JpH"W 3M1c=)(ß N_!Ӥ Q10VjmѶW N#`$۵FX'ng y2gQgQ]+-ɧtѱZGII3؞;s^5I))>)EG ,\r`U 9T^9FS? = em&Iv:-(SM;[Vr3A \TKT-JC\([DvYTEjlϚ`$/pKz,g},_SpjvJݑp}{`v, {mbvJe-) pm/$ F_Lz^i(lf>,zyҹx.7'^Q ɺh?{p8yеcUA 2h1V5a(p#xg8'h(٬{U[ې4`nS)l+?OpU8ԍ7Gm_N, #DAJV ?4[ԅ7(Vyc T4 wA-x%8tVmN4Y:l5+NZ1d{6tC';ѹ-N/R\X93 h(˹jˣrլ# z.cS{˖`OO`_`!zApTd'/<2 "iR9|SƲQRP2hRvRV%mtޡ1[Lknmj\6j꾩릒o²8ݯY7}1,tq{Pĵ.m˲gaE&f ۓm-'.g5EM_+[N*\˫SÐfu+?jREjwJ2~^pJ%މsk緪oo]`'{USQ =zX70(ZkȘY׍9Y7IO^>۝PnԗEq{gM#oinUo}R^9͌<7beEiFq6l!-~G eOU)w ߫|i/X}]D={=nkuqŀhc{lM&f\4E b }ᬡBIվ_<gM.gY-%T Vn{x׍jIɷ=Tni% wυ-TʪA'0'#\>TqE3ͦ/﷾eGsv S9mOTYs\qy|3'j+V56F ([r_T D;%\ҽuk;Dp]t@o\V~L^YƂo=kL6prȽ XQB=8S\u*ª ]+SAIU$6j;jjL&H:##T {3ggj P D%zE='n^d<\'ݜdN#c֪3{;5h:a+j 6Bk{4eKwܣCUNB-`Ņ]OYdUntq/'q{A聪=j=Ed. W,Ϥ"@W)Gp5FDEn S€;IL|RbC^-BC%]]oǑ}S|=s `dZ vY(he! SI{!?~zzhޙSnR̽3q Gn>Zc =scz{MNtOGs,oSt冹=0Cypt0 'OrCVOG_ol(o/OS^6ϾBA. cYC9]~a\~~oL` b(S?oȴ']_pp۰޴[|t17(П.]]ns;!9uM7}[B֦/Sy@ol\ŧe]覘"es`<]J\ k7_뾉d~puﳣzgC6/U ˶ȑ킗 L{f꟟޾!-{\&zZs)@~C"Nn"M_PDZR'O%ib t_uɱѩƙ&Fe! N T3&D_4=۹>P<IU;W,g`Wj ME<)|<͋wu!ExRR~e}=' ]"XlM~ʄ&Q@w\t!((K#~<Gñ>'mG]wozo~~s]yśo>u׿]߾/x}ʧzyW/{;嫯̗w_/^~绫zsu{w~ًWNj?xMϷ/pߏ/~.o-}yH3A~\~H&Ф_P< G _j@  .[@jԓE>텱3ɇ!eNU[۸D?ʁPo@xN{<֝CLLE ɵ,HƶqʡDC.pPWq ) }u@.9J76_2-b ߮MXo]g.ʂ%Ցt7P*10bNGIP{q_oŔ]u@+LtÌˁL{tIO،8;B* VO$ *r4z7&5 <ؠ@>QH.i(ۖ ,w]N=si:i &Ea17|^C0ChuJ,;Z B&8gvLdUHB1%sZZ{H|G({=&@b_̀?L])\*,e&3׍o<8v7|}9Rtէy{J4)5 -֎v^(6qP.7ix9%`b=8u-Tc.S¾'IwM+j:ͶhK:jPuBKH ZH*: X]Ynok^+Q[mEpz>u0dznV6ܛ Ze`fGrbͳc!D 5'R9GB7"h*|m$#D#&7 *)XA/Rړ>motXpڔYp.1TXU)^u 4p|O.UA*>ކzy6ryI.իxFviIӗh!A9?Q9ǥYVǐm.W-Δ0>Gg#9$߱t4a2V1HP7ƞYDמ zݸcvJi3AlILu`_,R#@]R8Źj1%_\bVÈ4zњ2P؆gT^$9[ yb\lW)xzO՞ TuELNGxzkfmU`;&YA:3#_38v?-vqSs3vVذ J}Vےi[2TXxkT郳Z9},?:-zD>'kZQg؏SWLR>Co+F2).&_ӰM`Q @VF8.qbǻ?kOƪ2~RNJ*OK&ZLQu<@(Ԏ'q[?_8# ɏB@ߛ7o%ʹon^> i6](h1ç?oۑ$X VbJbX@>}]w׍[ؖڮ ԛrDR)t ,rXawe0Tnu3Ttfq;n!oqяqّ'֬>$u>w 3;0+O#<ڀpM=>dw,a'Tr v96ۍt,[9c9rlʱ]saչu/΃񟡕īʹʩu>S<6S><2Q" E0O7zEARUlRR7QP[ 43x&s]c/oW';{'eL u&0N] Rpe^d8iQ%]Q6 i^:py}$9-ǒh7[ڡ6XbsTL8x(=`prAIWؖQLㄩLPi=_C+u\!n~FR}:@IaaǠD#SQY*;ժٿv n;U, RdU!vxi6ִhhmF!YSjk5fؠQTڵInw.tX.B оð] \V3yPݜN{y*tx"azl|N ٕq( %01Z8FTilDKL/*2BxfnU70QNJʳ'SdZcvU?,ыf)RʒFrM#UK Bv*̟SB*ECSx Gfb4`< ; u2*O1e)-72:JSwO\0HND.7VyI A9!>լLѡ.IOõZIlثqzR2MZOs2+$%i ..6- `b1qElj5G|hL]#TpAr'/Xg+Op+)_|r]/leZ`[j |5 fʤzmRڂ8`IIƎJ,vt!T5(hd>eQ`$>^fT<C̀(Rf|pVuqq7u:Ҝ gϖuvYg:'.ZWgw_Os?_y 9TCurۏ?]R݇[W̪5 ŶOATCOTv/=M);zE2dZ!>h6s\t-H@rTйl.#Ʈ)`:g!6=o1qKnU7AG1c 2snzNYc$xU;EիTm^9@?_)i'-3j^HͺsXgD@JI wMbA&I.Pwg"n ܎Lr3JG$`)T@ClbEٮ2QEz"P$"Ā<z"ܰm#aa4ɑ&+z..R:.瓂ƤFezO6%Tf% 6TTVH6Q.-Ƀ oTaʪ[}[;D|vH`薇vp8\"yTЄinmTc 'h{xF6]*,_)&N'LrK!ɎĠZO5hWO !fZq


H(פfU5<ב]]wԜV?NGmGiod#7m'N@hb>OOptHd 8XUOUIQ[l~qs*ApIۗ@Sw V}ePƶNGyz݆YɖČ-ΚYI[SWz&n6& s3&ԜT sckH@#g QM]Pn>K05镂֖{S>kd܈~=t(Nҵ4_Z1ޭn0qy T,SO( @]1g+>5<F\/Nߧ[YFY<^9ڼH|`Co&lFʁNRrՠWѴ̈EIJNU7;HB>GaUtꈅ2ŐBc(~S&܍LŖ)z؅^5?+jbvLpInPhpoXr$ۀT1tsaMO tX lHl$N5Mx"VqU̒ ѵ:d,M`8#)4.nRq<2Q]dAK_G]bα؁?q;g7n7:<"pWsJgsgH7Uضo~ݛ_}u}sGTs|Mh?QV}\GWGB(";x;eg%?"xAz 8G, z Ԝ dXY8RT0i:uAAb哶D ؍Pi͂9!(3Cp쑠NJ %Zm!; e/`>CK7j@Jh^ y/өwxYHeoIMѯ/ ZOdtAIƙ`h+:q61Spox Ъ.DJ:RZV{%GtC8W|0=/4Ё t~<> t 5|ʢ2SjZ=WR00Th Yůx OKIL>)3~:%#xk4+^?+f~E 7:i96(+ I:xDWm*@k^Qa4JÎvHe^?Zf^LQԘ^|'VWLJ77hUxeitdͤuO2L# \m{s$oQ =X6(ɰ7@-Utm^KSP*L Z@%XRFSGRw#Y(>}9KK ixW\>AuIgݶRưBf g&:aaeR;wzJėQ[O C$I?12gsGi60, - .+6јbOJ`'`S -"uE %"Dn+eTdk!UBC7%]ko7OkټAh3$8ޝ2ɐ_MuODr/zSU4Ͽ4~;D?{>i./)hi]ŧ|{o:ؽΗjޠwFoSo{ / фGa"`.{O]ow|y m*//].uqo>D?&<=FS?F:KZ)`<ߠ6+7)!}Q@jZTY>۪9C1{Z|on>q[<{:O?=xU꫋ֻ?|pï_?wec_nwon]8n^_owIg߼>߽x*}i 5pn=|_g7?|p}{s]Û7WW7oo.~x y/{p{uo<=o?~g?_=|yO^_o?rݫܿ_c*o?y,YpRE`Ri !WNiɤ,c_o[|*w:WTT>Ȍ2U\v-׻]HYi_Oӓʌ}o4Q>>m32A}OH*j0ODkْUs &LdӨ}Q.w4R_4n iSQ5!J4/j&ΐSRGZ\2E[4I|hm]v_UK_T4DETE>ƶB1`7lhe5hٺkzú7m6_!4٦5~vSC ;6_ I|Cv )ȢdaVEo 4_*m&ٜA7F#ϲvUꪸTiޕ#n%eLV톩 0R0]8ɡBK z}6/Mhrbܴ݊78}\ٶuSS1T_r6iiܦ%lls3 o(@I24G6`s=EQ?ހD"V'ڸѺ}t*P6l~֤( )u1I/]uYM|d,-rVŖ/a)1 R|$ҿuNqggI2{ȢAbyHcdӾy5->BL$;E0XzCˠ(CK;LM>UO`HRjkl~PG7 Ec0%x5M8)@g/E37h"]-b# 77ڠT=t꣛CGωMj/s Qì&پ|Sf]OC_.jirkK,ibKW} ޶YX [vJ hx''pЖRL 9M褉'#yZcZMmzAN(/e%ɨjD,bD 5r'3pۭEdFH͉4+A/MrmvsFeZͪp͖nX&B>MLEGSj8h,e 1XG6^R4GLm !u#|f\Y@8!E(wӐJJ:[Z6VO5'ma G6j]ׅ/׷7-^֟_O]2̗>+-_xLe[J}֔ސfPSVQ}ќYfq]q =?3Sq/#Ռ@(RWl)J+UWZi^K +ʐ4YuLN[EC}Qr9LJە ۇ-s$u} [fxO6`$S^QT:bv>XH4PePJ,N[o¨yX3AMC@S5ֿg or[M:ɵ>; v81q X('F)(ȪQ{ p[ =ڲme+-_5O{2&y2$%X5rۄA A ͞sܚ!Ѧ#bȔECd(j$]OkW<9,F<$Y~uY^G6fM%[_:T95HvfHn[L9(M,>|㙈-DԦQ$RӃX MY&'#ݼԦ`Ss&8=GDX;[q (26NkU7 _GO+S3B ٦f%Cr&HkkZ "-6]Xl:8]Ƭ֐oȄ*|KJ#?4ofCd3Y<`v<o(S tЬX}ICZCCY53gڵ5]g:%Gp%pC]Yz\G4E<$sX(yN+qK#jFa9)jcO*)c5H_}dG4sfَE w v{ZYE*'}Ŵ,ƴ9͕X.}eig$cz];u[ևѪXb&*qkSr,&32Hp!(Q% Lg cq]N]7u6VPDX8n!`:K l'+* 4_g]]zs LEf#}K+|Ů&:1xD4IKeJ\;=M#c}9HD֑ H@x~+SfEy2į҂rmz8aev2*DܓݓO.2ʤdTJq$.>m!7|'v}pٮ\sɜʔř)K]=Gy*MSFooB9ǩh8&nmeWfB28all wk)RѐVtCq_;nkϼ;£Mk0Yl4Ud#1(~ [C dTJ?b]'T NW7SmPݡ`xPcqǪK- 80,XK -N`:I9s m/ĩbk+0yЋnmJ7YqudN#Z$6dU7;fyɂ=Pgf;X ȉ6nzXb;H)ZCBȲ*q7* \y-0HNe}&D=a׈ȳxkNl3!AVi (|,))1O _ lk f+HGyBFo'[Y[jί7dϴpV>Yd )}R%Upm0&h Rwq;D6} (PiDFҔ;7m+KchM<%(lTLhAacM1@nć,2n<6 ‚R;g0,\s(z1fލ+L)HZ K;X#͝c.X\9Ҧh8-bgբN$րF\PM#UoT$M/J-C ~{-kSifG\q{*\xm,+f5l9J{_ e9SӀB '5T7LnJ_S>kSn!MfLfȒfq` +o0Zbl=rΗ:-H~7_xI?x&gz1{}M(4V Nio(Kh(nvn<篞>m{YX^GVj4dUz#‽d_˃}n7x&u8`UF\~6){E had' 9]XO'{H`\: S,΀ BLG]ZSڙ4 -MkBAo9 R*؃SU{>@o@:jʪ|,vvgmI[CHz./l^xBI|"gnZr-6O$C~yF'=|EEɆ620-)%BgnXhJ,B TF>.eS6-WҢlHg|$xP c 嬑1=Br jX3Ӳ{-|}OB,Ic혢--tLШA)cF˞Eёs}jָ=8C8^3+ؕ:`r؎[qHBa#mS'[=NV ]:ǴPcsl(AquʢRS=rȓgTj1pi/]nT8sy @@Eqmǝ 'xT wXe ~!ܳTNKuh,>oԊVmŊr8pA̕qRf)sQ^洓GDj_lӳo^̴gOq?sqxӌk>g9y I .4/MW\8roZtQwQ䭔M`u yĬ ;32vxVKʳ9r aSS)fpOm(,rqΠ$>ڲcaB=O'A{Ѻp42%(v l7)sZI&dt0 P/w 4;3 כֿ*^ fCoW]&ݶ>ȖuOF{iZh@D ~_PT`IDDpA^.#>XJG!ښ?4=>X& z;C < >U/R<$|>XXl?/(N߁k v"ɪ hfSiH9%\WII:V{\{7ߵJ?DbTN5]5}D:[^5i 0YmEн+ȩG\`/snNdRzשUE}VQhc H kpN(!'z` X~nGO.n %A3(j'-R [|F)8 {^i hl<- g/ 7s^>퓳 v @xyOÉNN&r&n,0ڎC%nEJ`߂:#'xdhQDo GT|9l}qI>jdՁt:uOv4ƂY ĄpPNġ]GŢb׏g683=M8(d/׃A-9h_p807g&Sɴ vҪƣJ}]}/x$0䓕Np2_tFCn$_Fh#Ȇ1`7צb֦sV !'68a{i[HW'Q 2pI?A]"9Y[R\[C)JТM[3S/jX.s퓳??k&/ X_/e}iOZ#+:Ҧ!"WШ"$ _'O& ӠÎ&ʈ_ґ\([_9Y,_&K7Y,*|A}ԇG|8m )?yKo׋lKOh`b%:u\Wkr %YzhQ)2䯨̚VrZ.VUee}pNW[ܳiH3L agY)kD䯗.{ΥW `nn`lfmQR&s2+KzXޙ‰+RV&Ԏׯ7#/S% sG>%fegVnC ߀R}9ر=U{ %|wN!pD1NXb8z]Q}^3,Spn?vgo.w/}^`Smj?N/./of_׫}ܾ5_;}~fX5xG榷<^f+g?J8/J] lEc0?r~s\Cñ$Zr $2Uy zZ ܳ)9x ԓ<4n*b;*^%BeDyRC&ۍllߴ]A]4*:Eͱ3[NV1I[>b nf}ձtOWt/,bVy ].FUsCGk@)GK:+)o6-Uh]B/,t5 #([³bnD;dbe0j’;aCGHN6Ո%fz646z U=\;bKYq Q59 }5ZKK1FeM DӼB*yIL6HB̍=;/p~RFwmzAuַ܉E<"h;;vz)$#I^`/a:A&t+DdC͋OƓ&Ug3C9 lf5#|9L%SgX\{{Z҃".{n;#R3VJ~3}̣w|3|dLuVt "0v?Ta=) 0 ,X 5EPh#A6Zvop8+uAϤP?UP"t5j3 4CFXAs+c4 "# *'(ěMj8=T4[9?xk}bm > >; -+.O b~Gh%\7U_40ݩ.aN*l'v u8!7 I PLiۛv8/*MTYzI8j~w1_:cG Th˛VMqւv6҂N}@4rjl9GhqB#Yv &.hS| u16?M'fv*?di^v$ӲM( 7$!Ù2#aײ(/m-- `h>l"c^HO19"kX0&IBC+][o7~wv+px6vkkaٰ㇬bE6uGV&Y.RGziN*3/E.cyiRK4~?īÇ d>S>8R;yk ji/ ]+'h_C=I+k~ל6)<VJDy#__ {#w$! Ogo.ux@ koW*Z^ɪm*;z²tK))x.~( oQ,2X@sFy0; @XbUQINz$bc ag4G$ #C9-R,Hob9+(czuY-]BFv*tP^uM,T<+bC9m.sy#y40KP5k#9ˬ$(O?5hkd k@C8We3z%$ÎkJ,}DchȀ5qT 3XRIY96Y= KQa)&; ۳mvnP)Cl0XYL,6Z >qt(dn,VQLG _ک#V쮥L{r|{ח^_/\0OO/pWOHWOI'ZwO_}u|7߅^O7w7F_}xۧotuw޿Us}R)Y>_<6o>5>믾~x͛ۏo^xӇ޽o6߿ ߻;.=woz?^x?ok7ݾ {On>^\x uz>|&Eef]ZyqA1Msz3us?׳Uz0J i/@K?U^1T_w-'vͮt.2V"^56ҲVH:~?%b|X^>7jGpX`Q%nj ^ DqugJxҞE'`ؾ[MRf,2к=6-:Ӑ.V>ڕ@(`׌v"x+Hlhp;~i_Է*xhі_R ֥#4d7l6Y~ZƕÐS~&E/OyRAC Ub.%XM)ppo` mCԀ lΒQA Esu~?D[ڪ0 4S?Vk  : AOGGjCO dng@:9pj>V G+AW,{]}VOe@H+K^HD+X&Q?axqXgA4m.(Wk iB9$!SWF'|3P2N, bTU%2zpV $W%vcU梤_}gRh6h E=aQ5p; j.wVL<OkQt+\()٪ݳbl/"5Emx:`hx,Z"UiDf.'.2&ʵU1%XaX$d`:vQWs}ݿbLDw$ju@ID-tXDte/jwn RuTjVg=KG=}zL-kj; 4ΒqT"bp>BD_ E񺚮I 5뭢xQ5E,W/.jxSY-d ^):abkq[k~ CT٫ kZz ՜qE[zݧJ+>ծoXYȄEeI#յ jaI2"np(30wX@;"o@p*HTbtV9KU*y$5 p`πRbM0֕u| `2 RIILjCOx末*'IOO>b7&ouK$`;@x/ yqx~qE3QA0W4tsw"Q7?_!^kQ'HF]+To?pt{>O8i T( $5 ^Z ̃,ཱུtYM5*@ԭ(:=ȣTSƛ!".QZ T%ky`~vu 8 &XGшZv`A,Ln$\LlrŘMik^s?fðbW L/9)%}?e k) x?0!;M7Cl4. +ק) ݽnhp@0Ypl30iaAb M1.I34HdWu'f2O ^rz@c)J\L' 6a1 \)X ]:nG"(D[PG.lN[홟&xf`b%^ DعfMIŔ19#KǑu&T#sؑu4$)5 I:jLc@hr E4#FonewdK+ROQ YaG\[Ti=C~N7z͐3*/k!q*ܕy\p=b?"lAS#"CJIv,\j;]}znB"bGuE @,DΌXs1Utèڋ~Uw#w=zȻr^%Pq_Z44l1xH~ dYIAԑС8%ʿ7 I-r2'ú5 Hl_`L,mHW`e0 /+ZOqOg`XeM-S񓦰!^pxU8w7z^j]aHv^ DS-1ݿP\okZF,_3-=wΣ 19  ϕ@/$50 Rs"η>_- wz*\7(!\cj ~V4jף\ܰ)LAjN S3#5 ohWPWg Ok fRQ3nk%P˵$s PpG kspfiaO<Qp'|D\C.`x VpZWׂǛRa>A%H܅u߼y~W|=S^4TN {%8t-]X4]N4c:P;5(gV1z,ʵ]%pP DڕuhP?KKX8'Fh7RHPPcPAج5#ݺ:^HU Tl%aQ~!QLzIlIdKX;Yɬ8ð:V(fQ[25к09Xm±eaڡ9us3$ؿ-Hԩg:҅d^IϻX.{FסvjJPiTPlF)84"țr{ЇPME^ F^!U?/RLewz 6T:QVNWorKIHyPc/T3' D$?uJ1ؔVI9\ |Jjb@f+ji-+IKϊlUkcjbv1/{T-Dw< = F1 LamC+TP]A<`'٩RB^ Q$ Fd@ME(vS2{4{:U)MV0G԰ڡH:ŕቶx&N^Flz"8U@AG)Fbץgzgs{>+;q(ּݸB2KHl㋻EdB '׃:=x%u9 vVf[z>eم]{)~#̰ȏGv`Wn @~HFUƕ(U v{YDu<}GaN d;U[%ZU7ENu׉z? -s d( z3K-Ez^Sl܁m5R=yD]# hJ܋NmV@6脑bty=_kV[VTw^\+Mj`(~R{t ׊kkmT+ upHT ]3>y\-QZy޴`nY[Z C%ZJ̝lZ8']??j,f6E泱N aٗ$#AJfPX{,Н(= $ÒۄN Hf·XG]AR;C;h\r8by@7[H)ªקd(Hz2`ɰ)qbH:Ӻ%C#,7N)9ϰ-,&߲RA^ MMuk ĬyQn˃ ı,إo1_x[.+:~IZ8TEjd썵Kx\96xht+5ޜ _: ;"sN Z [U"âtgh+'̅Ag׍sXzaC95pBsa4I{qrj'&*-»rhIЁ*Dh+"4r7X*.t:>$)0@;G_iW2dhr96WFqApsʊJX/;,Q,iZX9ΚcpR DM eP*\}OF9 XzOW. ܽ83]Ͳr|*hlg 9CmUn!2(Z1E,mqȗSSj~$Lil+:RHtPJ1`B^ { I a*Y@rZ ȬPWȉʗݦ9j ef 9 ^DU, /0%(kILv??֌d^pxnGck 6[8 +nIEr {$),n3'H,5%rT9[GkJ=cpNF> ejϮ"=WY,NNO%]Jvp (<(ι vb.T ԃ~b9k plTM!e^d03RlT ڶX{|dsTrs»%qiAg =ȧ#vcˊo#ˎ%vN8 2&Xot i]Ŵ"f`aXַӰ1aY6X݃#a2`I d;tGX %$Oao°O ِB5;׬\N;&<$9v2ߎBITaf-VG,ʡ mRlLIpVbcZ9 &6¥O3hCS<9aomI'(u@x_p"\ΑtP9ǵaYp[HhyBTɳ/XUQйʐ ͉Ƭ8,="\L`YñXZBcy}p8yg_J*~s?^rQb%¯K# YF߼] :x4~zٲsXr,Djm2 nYGp9 7e]@d,t^??B(y8P; " %Mo s䧂!4 -ቷ$lC+ rPkeQ;""6$M/ju=&mC8c&]lb/!SX2K@2&^ <&+4CT0 fuZ ־Wafփ%c΍q$O̜d,glD=7\ai7w `sAfI P:f!;8|K`7#S/kw;+hnV5\Փ`DBA9G08αD1<m1ԅ22 U+m V!Ҋ+ .C9)톹91#7y+eFlZU̵`JNf$buVu2=T0B]&ba]I]#AKp2O 1,lLcnL cc#;#19#L:-e<%B#-zHUĆ!feMzjfEcNDVsSXTIansWffsY_#VLUJ<;#le~IҺ]L5J2.BcRHΒavu3?X=N&B6)L.$LZM)bl"9еe]],B^yls&@V ҂đ a \B'zI[tevl l.x0G[ nT<\xZ *.`ygpYJi#1)q;>\%Fc>"rK(Y1̸@ 4cbUl:53t0ӫEgb؞|d:fTjr /e,]]ܺ {r6yfoijR0WjҼɦ/^Ku79*IůpN%N+nZeV>3nnj3vTrzPvRQx+]8=XͨCc2 +J{J[~; a;tvRSe'R=$ gv/͢ piHyk¡j7nK Mw[ФGwڛt\Rle{Kj b*ۜIg;lLmK&K2Ml=%Zc 6یzMOIEg%si\ *~riCV+yu,>ǜ+agŌ'o0I3=3A?'{ VZrDzAqJ1XMj٪!sցL0[};Iog)2PkiZeY96O4Enˈ\˾Xp@3}TwaE 9DF} c/!ABCD)]o\Ǒ?b(Whw? \($00vWq_'f}TA/POSuX18p/B!?uׅ:YNv LE"҇:uu~|m,7BG|PC 8>8~,8_x@}~h!O[&86N%8;7-y}s.ѯ뗾 [R/}b;0lOLAqTZ=yjdΦۆKts,Gތ_kls2=,$|?\ݾ}bh{r/'ϟy˯ ?vypsww}{woWonՋW_?o*wxO?Q?Ƿ`{㧋˻OZxyw{̿|jݧ*s\_7wN=|ӿ|}?.J?_:|W/txÏuUǑ$b]nPڹ4^a}AmߛLIVPs/aq=t4B<!e=P|&CeQC:" MXi4$z[Vgr}pHVv|g5*pD3t y-'>`Oa'9"eyAX `\")VW=o,6k;Tр*g1҅>=‡tm[zs| x^4eQȴ|e65Q7nzc4u @xhW(w"S |>*KZn s8?ja}'xHa0͔iL8]6#E rp?h|wz7,GTHܰDA`QK6lkgj?"%Ll,]H[|B:: :0/ ju=O ̋3&f'0MdL6#"Qz 2:*`P5jPټ6hOѸHgU J\et~;wiiu{-|uu,%\~(=_}y/cQϽ_:Uݛwn>ㅧ^WXgX|YϾO~o}ckWW<@Ko`E;<Lk]0p"-j5{Bb3/C|eg6*xpo#*AG8Evgހ&O6: ebOQQtΆPyޟXjak-9m f4=v5S\!*{"Y@xzt:anJ{7rm_E5i\*b-g/X*{!o}(FS MH/ٷ6`{xrġ%U?UTmWI务hEvIX#9lz{ِ^U.d6LorU$|DY߰#eT znSm|XP)la=>Ûio~Cbl)!1@/AѤEmWkם=bMv녻l X==;M!.7k74R`*Qȍeu+|A)u(Kxوl&g)!O!ٜyڈ_Dt|VLJ6_RjyNLC/u1Ær5z($NF͐ڢ+J:;г<^m9Ld` gzGovm;#V1ڱmf되*m"|5S-}`'lgirAɩTK]igxJ 'HQ$vH%_`!{UFzCusx :0!s$뗐H>+mt ?Ԏ k{c#m;5sl '6l-*],{ӧʿZsBTcّ] ]8]?2!f,Bo{R4`Rێu5z~<2i{i+ yX7y[t`݇c3g4Hۦ`M^oc5=y%\:5rQ#LJCLN5s7i!2| CvLVuAiضoۈ=x1-0/Z>(F @ 4*<E>{Ơj(O.<9~xˇo_Վ^=G?_Q+rfW;-«k+jڔcTC",d}kTo6TfH ojm^2 [-y9H@y,vΊ ;8iʘIbOҦڢx L Ӗw,]% &r'8gdH% ٴͶo-Gg%TG-s:;q$Zh9,Rj] ^# w6sv/I+!m&n u9pǾAjsQXXv¾Q_Ѐv&$(5&n zxQ`&*[F(1zG-p(5h2 gf|:TTA\ؿ /EӋSk؞cZv-`4k Y\Dtڢ9Ipd0LFK;- ՠ TOl(L{iigb)Ek_x9ʳi^@0ٹq= 4 p#5kkAd$/PJ0с!9qj3O}+"< O";"M0P٫i1ZM' /M0j+=&H3`y6]7j8W+1GFj7+joENyظ0# s-fAfrdh W]Q+а7MFH:H\]\}. J 10nArzteCႾPlIfT*p@Tla2 +.3YXo:j(ٶmVꅙ% /DX&k8?ж? Hy\o:< _ tYjҸ:P+9s1i[A=1ŇvL46i18iS&'(a(%AP 3OOnEu pUj5_[AdgdTˍCWj6l:eг=NVI سABYo ~ݶ֌c4cJʠ5 h螺rފkwj\6Wuh瓀 Ui ܖW%adFPUT0(Q/Zp 0gvjT p^M^ i/%Wg'6oߔozja} <j0B|\ةC:įE7z]o NFmϨ="ŀ[fB=Z^P]7{ @jPkA*m8aD7AhI \km7GۮRGg9g2T9yWBv 7E(@v>d^O\+g۹qݴKA,"pwdJCxV0)˥Q}HE偾k*Úڻ!2<:l08LJU̓Q2[ڣ^%ވ́;7TaGkv.Sq)ma:&$%MFsE%1'5qVm7{2kXZ|#-kZx/<5-=4b\N@#%Zj=w>UvZWl=}AU^9Z,9< c(T  V//.WEݥXĹ"WME)%,x_]Eّ4$e'.`k}y2-o(P`0Mn)t+i?%s30@4f6"ݱކ7=䩢B]ưznO)]YF={suLe(8pP+xD\creֆ c^ne3p{v9yЯ<&KW~? z|N֪wKyomOw>?q9޼zq7/o~|w/~Ƶ8&rG?K?~o4sԿq顱[Ɩlie&Sc{vll;ؖ S\ t]w"^WF{l>/3Dz^6 PBg2:`gay|u]^EtPag2!=iʾAE6\t.uy*<ηLYe4g f 4(xsE`q'=J~ó8%횸Lz8>Dw}|RGYy{f; =Yfה`q%[ jtO'vim.6sXeL!7 a˭r3q T՗È'-qtͦľkH? /q+l1b!AJ;E֐%hEXY?8E2j^FܠK"f\GFKVf!A}zZ?کza'5h xUgÚ,,YC(toDThߛ`e/UTMi{gA칤ݥXjoGɆ'H`b4m90Ӌ,a^b⧘+ mW9Ĺ[)MN8Q3`j%YU^B zT!JAhvkV_= qM~j{oͻ럮o=yi}O7Ъ3jc,V[+FyoaC<_,$|Q|X ɛ-vKkTm<;?Tooʿ6W*;Hǔ3kJE(v>#d++Z)4H,LψPQ1Rq]޵V1Ht?"Y9*ϐowʕR[(?C>QB6 {ذ5_B*DYTA:%\ڲA1ʔ<\CzWK"]J? ~ڹYw,hwqs9ʜKWuJT^] ;FV3A$Y=e -I9f~A3z\ P:MBC%][oǑ~SLga,Kdm(p%"! Kxa?~zir+JbG̙uO?_NGܞ|>Esdi]Ojm~7֓3ܮg6}r]˽gɆezW]l:PޤR?\ >>ի-h74R"WeO ,Tn(qg]?lQyvszHo%{źI !C.Wݐ˚M]x R(b;wf;eaqk98+j(#/ֳdSmNNЇNAVV޺N|CJ7oԥGYƞYi~-+G@C!rVN s S3sfw lG] U._nL ۗ'pxr A7/uSt7ԯ?e8.F^ggCv1Q<hCeJY&WX;h- (M^a*!v22AH9B[A*r`N(:m4O+.V${U7U:9&~q*R!GL?@s< +MOܐȓ//+iأ=[HTO+ariT@ѻ0$ۡS(]x1rսs"G6BS|Gk⽲'j`g^‹-ZmRkad-0_ ̜B]6/]QIӺT޵gBٙe ɼ0jŬU w8b6 +N#(>P  l+Jv\4PeǣR83ΕW(2,#ߟPEW&0O9 ){Uݡ~nHg6Zwŗ 2,f0%e2 sj!膑߼aUK$ ?j:ua#ҸK()5:lPZau3\Z rUORT"$L.ȒA-eCv5;}//޾zTϿG(O?=zKoҞ՟?_]__|Ň7_<}uۗ1W|{|pՇ7/Ǘ>y?o߾*||g\8瞽myHȇ6O/n_ _>}??x۷o"߾ۗo\}͇w德gϾzqKouxS%w{>}~ח7_W={qz翝]o?N?_O_?M駯5qFc93Pr$v 5opZYl+p$H-` jKQQ9;OhRŁѫ F/d<0{?1-BQۻT<&!1d>-Y`: ú?<0rD -uδ aӪ ڂ) 6Gj6ꯛPDO0v([ApG"!d.i .sjׯH2Wlb>aV4?."(-Z]y }P6S7(B;er:S h%i 8@K#6~nǼu'!ikmqN`w׻I"-Ev"EL/h]kO%cCӭuΗD΂Z(6TPD*ͣʤh*-]t&K 7?7+ya'Q4ufam$)NGt?dS1NfRFCbˑ7 7JSAL;zq@t"ZatmͼP̩mES͒B>]UH)zCW3챐'JEJ>d`.{9Qض*J0 Ø洀8t nWrb9帴.djrƒ`C2B 'LhJ ia3TlؑqAC+6-FxNyDrd~XW`~)96"°aMzd*٠H񋤃u$A$4'*Ğ-i ZjiU!Oc$f[7ɋe`xTٯ"=2S,$I$LJꀻ.6II $"gmF0G$̻L q>z,5D pr:Hv)+|-B,cMo\Ҝ1;\*뫋߽>Ѕ=ʅgٵE$3І񅟽Pk%7l*GpiUp:~j& s5SYT99 mE"f&J% ^ N3(-iMqTѸp jD8ZHۀo* <̾_:Uyc?}H9K:_ٲT@a uXa\e@W5Oւ; "jdi`'nNB'h?lC}` ̈ʢPN8(XM;%t쵔O|AiSLKݓAΒ%7al !I#WP~G#HDQvg`,“f$4߅^0[(5 )qID Pz0|zHȍEF] ©kZ=V=pi PCµR8qXc%'Ga c` b=.` nH2a93@Lc*X { i:iBVY$Ad^Pol9(VM-fdH K`1I '/,}rC0Q,+Rf@ԍB,1+{0Bc1d'E%3ȁv`C@=G'y.W22 Wk-1vlbXLg$2*exyBk沓nZ!ctH 74qf^G2)k3YuY sq<,lȥa\+FBCk1׷_w$?+.Zoo˯|~_7 BM8Jz| &B-()Z) M+0 zRĭ3,lސ]]7HFXdh8F d_$ġ2W"_뇁lCbyI6x b0T{҇Fv uܐZ1 cc_NN^P$z+DNĺ1qUQ- o(/d0IWq}{p'X*ԓV`RvJ8É}W!a'ERثwd1hTnXs#HTnF( % zGLjbN=07,h6o0$lb,PBKn.qКv{`);900iv9pHPr\Ru TGsv MvPLr Ę~-p!}TZK @ Jbꄞddp}#CptHNBAxun`XWAuXA!ޘOh*Wz'浰#Arjb6#S;0]`X55=B}R$9oW"ka"\vɵfEl̀^5LK#@%V:$(Yp gYJ> 邰W\i l]jнWڭqS@AT"=  ;@Eyc%8r 7]t %]AcS}>f+ZPZ UE">7LU;H%)&`ͽ)i]Uy`8Ɠqpožs{kD^%h@ D[ͯ~ś/6OP ]S՞,#$pf^<y%#:uicaS#MW nJC:Z%:Bu8~j@`M\]IuUS6nhC$OQl=R=H]~TZ1ӋϨHdwÄwfjчUq *K( Xwph<$Z, K \0\L [>yɵZX,bAM5lWY͂m9H:OpWF 0+n%^ mU٦F=@E-ѐJp`#9RSS^懽T$mv1=pWZ$%Rs S)G)O (ЁX$ `t ^ E0X̣VmR-b*hMFLH$+Nu I~uв@:6KԈ 1WhO]5XX͖ Q -mEk2;6ڢ뗥ҚC0Wa55' yf](jՖgFR( "-LsNK>-' IFyCkB5(w%j᥋R&:gVxzs}b*: ͞!/A;S!tLj KN%"SG"(=9:^ T9Z2>RA H9@1 ѶՆ4Vf w8D[r9zH Fk#pYINDjH WUzTus-d ccC[kIꪵZ#FE?O%90@6yvvcNg)ύ f@o@s㝶>pZW׷Wz+_gڊU/_nuys}_pfB/o>O6fS=SOIpMU9Sӂ|.tUUN"r^g*]2QRb͟Wc߱}Ђfu~WrLηLBu3]mqX#-9u,ZuaYRZ[::llwW&O vqrtc \5xҮ,jk#sfOz(q,fUN#\*cg:l~>aKK_W܂;_gFg~GF: ' 5LuJ%ٟF^Fa& $h_&,;띪vs+|Wv<&MQỹY4F3*ik:R[<ٮq@ a;_G9z7ؑffM1duTo[0Dև{Toc-}gk>2]927'=;u Hm;QbxGmcI4p;c Jf߲5>jWܑ3rZ]ěnl3_5ZyܱLj@4Љ[H %':X&~hg:ؑi,! g(IBۡeeFf; pA\WT )S 8Aw4_XJ]t]G.cx7 ṽ6~a:ouEGu5yfH 1T~C̣l;%N)ao!'܃V[rm^zR6He;BctJ߱V*?y~e0)QnKjqwÖ;띭{/vGus*]7 4L:3Nc&UY}jx0:0[W 3N NIpJᔘyW) L?Rj"9`,֥(Z]R$wK%hq"Y5ӒoG#e4!yxrh$w>k^Fԝc{n#V&GxzH1axmQkRڬ>ꬎHڛ[s!LnIIsB㊥*hs䁒ŝnN.AM莪j"0CFSJQ(5I #FUMRz wbXCmZ'y/(AnpIQGy|eUGt? @}qV˅%o֞)%JVLM22.`NKFn 2n*/,X{'4(nI&hnEbij Ń GݿU4pN4 "j%qn);Гƨu)#˪)}i*)VW¡u1  `ɞO X {Z4jVo]1T-ǥl٣'%׌+m2 ,3a`omyZSsvia }d.U#>] dTͰ> GY}!yfWImwฬe'/AȝCFOsol u-D9M^2 dW[eٌ?C% @,Zڊ:$ 6BGXm%>`B# 6+V&$a}e9t ,9 rvۋYsٞ gLjqf+d `:?n a͍pќA{ r.v|24Z1ftVd@9"h92@ "v}&cl6 ʎ_QN,x ]^s:Bv}Xa 7 !`)="s+2#a@>d[kxĂLDx ؜QPˣQwuM[eiQfTTe)(sxJMfy,O _@2MXZ,!`QwM6-WK'j :-ǙnXyꮨ'T@RA@xpRgbqcYF+(ȑ&IݑFXDJB”Ws'Lΰ9`DeO';.;F.G.'_=}76Vp9sxLӓ?\[' \oϗ.>:`4{t}s$̙œ#euz(eqp`C,$ j&,5h! }"טcohI4,yJzS.Sm8i,[Jؖr=MgU"WIC1}n R2oUMC,SȮZF -J1ұ4N?pVZ  CnVa)kz L*[3LsE'{E8*-vxBnU%]) 2oSpxQYU8p /6GO Ixv ALEt"$hK9B, KE_ =g*jH')krR5%{Z׸"3 3f)}*/WAcQhŖ~Φq([1ч6ӈ)Os]`H`wfNA2b̦Y9@*l :4)kj[cN bYۢA pLKIݸ`@PX▮2%amXcb^ᔞ_6.үsZ_$?\9dH2ޅb[Vo1pVZi,ܠ4_NGR;|LmznLtnt9Qc>.Aryëі\}`7W[W2|7C`<&{^W]=nn.|ֻ+o_wϼIֻgg.p׿>*Ї;ᄌ|}p}{O~7_s/Mݧ?թrϵ94gŗ?/,V~}W={xǿ/*.{uׯr|uϯ*.{uW?tqi٭a>X+9>%7r\M9Tzji3 A!$:F^]:N5[Ȍ`"`*]&ٮwM(TVi¯?.r }__.W̓)SZ hJCz/dk Gr>%'~d&&@[iOˀWr~ `u -PVU6] #$:yWwé)cr! {OEXcfqeu?f Wsڕ 4,[56)k'T{d*Tʰ^yUn]53 "Rj$WsC$ |uvy 6)BXDф.=,{Ÿutoh/kk}u5pV-%'O(diRc_x{2d+0H$Jb^1&d@% [ ̌=?;TGt]w c1\dK\}%&9>Z"|5-9fA#"Z"| 22Q. (sjm!UfIFX[Ea,%_iՍT7,&;W!ًeA$"5l*1/ЫU9XLnT%Wː0FK,KT:BI$cʹ0vHtt;8\1IIB9|I(xD=T&sX1nlG#('8OsEPI(4>s2ht=$n@ e̶p Df9 %(hv ^ff`pGkТpi6`3lč5,БTՆ\0 qs$ֵ`\]כ5Է5lmP-&6+i24 yY@%y2a*1P8g[Ut! 6Q#P%\/rQCpHW CS}6qʂh D YVG:wxEl1bTU|noOU=.tsF;i쌌m "۶X5JSIyVL&`a@w&m"z@Y9iTwiNr+RCLQ9sXۂòSfZBrbmGBqW:2YJӢXF1@V 2Xp NKhZa[`2HbZ~10iu2olNpqA{mVBu!%iZ\5Mz?Mz+M{?0)=sgƖMYZv_WeiXs=Q6Bd 4]ް\[*=dj֙.$M5SI̺ZQ+j0_LKDQXLkqJJ4A—S%cc1d@ܨ=-F/>&>UwBǰ(>0d9 {#NREjdr^ڌGDAhq,Qq̙H$a`I#zoKSgTq.sa2ٜAݪHVxiO6Z b KNT%K&j/T*mW]VرN]l_#( ŀOҘZ,@(yj:Q?[d "FzҸ:Y |+?ܽwwk7?;h嗯:\}pV]zX>?:=>㻟>Ԥۏet溮_n>aVvg?zQvܷ9f} ~?EY6 ުW>>ΦDʪ6LdQpL; lJZLFOȔތKsL1KV*i":3ѣ -vˋW68>8#Gl/\-97YB*;X'0b,˔Fu…¸ŢU7X!.9͏$טYK5qG Nr Og):<%o]EO}B|$Nŀ/U].a;%y oe5%m&`HՖMt:Kؖ4k,ԬfDM; FpV|n;(tu0E:SG3JA)mNİ DF6I-J ;*~6ha,V1Yq$ $ѡexlV$Dmc[Jl;OyN\G! z2n/S% Uw)`}}b?|x_=e}o q3d"&_N\Ջ=,*r"n//Z"3O7x?})*y& (Ȇ!dv'$沾fpfgbAH 8:3۽| `1>.7r3BAVKB4HG$ F׋PȧT0UGYSt֛Z4cjpݫZ= Mwz-) ,5I(2n B K=2$FaNKbp.%`n#0z!51iQ̓J{USpfNӉpɺO7YJŴl7ZL~xI6`e,ꂞR1 FFxy %L-NM|Y7M>!2&Ԏ<e(5SO60 mQs?dzA/-M2cfJ29[KXp(َ̊j#v|JW)dJtUbB/z`KF333qʋQ2y܂,H'ӍdZ_Hj9:TҴ#΀VN6d~p,xl`c`TmMK4,= M¶ a@ a/JqNW8Qc71iqa-b˸|!$MJuDbCN&]TxɃopX(_mMY2Ǒc;5vpzVLRpפ  SBv`5aYh8%$Pd&yl1?3*j_vygRGGikaɹcE84>Yc;P9 J#[4*l<( 嬝<,1?~ڗE8#ltXhr 9sPLVc9W67aOQ2i~Wsy58i@91*fca2?m<0{Skʖ5( ˮcJLsTFA ~LIDXl8TZ g t'}l|?iqR8Ȕ1 ?;X`  q[? cь& dXJ 0gȗϵI9 &ex) >\7532?^y{!\y;Z>2wV/. YE!\>qʢR F:wĸ)\f ~q]O|+kWSx40t-,^^8|3!з+EL-mIv˹o#:k9: ;H[YK,36)y.4‘fL azX:PZN6eBa(O`#}`ů]&0fͱ. |/cx-d°8e%+Z'0hm2|EdSAg{l_&oiFLΎ@[Rb6.@ASdch@QƖڶqSOHiiΙ+f: pW;̅nb( !X.M.FtyPE$^~j(d+GOֻdUPv suBU㽤՘ca9Ǜ^Z5N%*ή82hL:BvxFJ^' /Im Z6z(힜m{TdٓƣSjj(_\^; is}SpYd"(LǞ0)J[ 9xbx1$7OHA ! r{ )}Ѿ!:R&׵bKozu%ъ[xQ*Ľ| h?]D,lP=ԡ@6 Z삖wݸn1gü$ƲGń=YpxɺԵrp. m Dp%Bݺ\ö4(@=Q Sp6.<| v9םK-A{9[rjVYN9N]:v7,x+Z93gừٰm6n ן@-b".n\7"0Q`UnfKo5x{LuNF,b8aJVoyB pKYa_B> oHl!0]+bQ,h0Pmc*B|2G۽?k_20ǚtR_lck,1u=QEP|Ŕד&Hj^WuǬnc =C&zֶQ-.sr)5DV_[p.?1,n9|0Y!CRрe1t6g򼎾#O`Ҙ=E!gJb>Np\C$%kR]JE;xJ "<SAݜVaݕXѡ;nU)OW o+&uEF%,x"[n:\e $ ISol1|bTӭHux .4$B5FlrgmV\*X_ā>Cu;!»ĆT<Щ=͡R{yԵ&8&[ ފPK*B;wR\]ۣdC_:rcfL3l qnEl!zo;+ VEI"pUĎ[r&D `Xۇ RBكB6Bn.! =)6Wڐk2='rU`Džs\-r80x}/Zpisf׆hߖsNՀ.R_ uPa9`9m6c=g[ )Rc$ЪK<.d1DaXyI胕w )"VK:єnvmDn;Z6Uƒ8(&=b.weFS ֑V 5sq-\k|!SðTPT':uЁ3"]`c-ͰG*jAn1*5 2`C?5a;:,r&1i*0ʥ-?صv˲,jXPkm۳b7i(ˡ9c=Z<@gJk xS%z(hcd;MUҳ?#=v'zlzRRP{GhM}d cdD%G k I`s< )쀔|)}(b/Ўqyql\x\ 5 #dzj<YrOӷ=ƥE %zgc䬏Gjf1k$]ʶ[M'q3vM Zޤf/Wv69F>Wcr,ow`<3x TϦv}Cia^݆ڳJbS׭ݠSjc~rlZ7"#b9FAM4%vwq-Qm0d?~m.̆sC7PxDiw ?dyX Pԯ4'zbpm;m*L0 5"M$x]c@0֊%.Ug( nl^ thl$y sB5:àtLK?+i$AK&:M"e[eHSץG W3an\4ؐ;fq}tC% iiM."b@45Zdch|N̞dukr) (G|U|1*R 2PcqDF"dQ1<{HP1$0'ȲV$ض& w 79#NCgNNhsjx\ `5+\k $z dldft k"$(6Fͅ ZS-R/\8\{H T-U7@2h&e`u6"a;FkEae .b\N xC{ 1B"GS9r3 .R۹x<!쮿pʼnT.qOec "=&EK)z6LmG&$(v'Bi$#6],d*u Wz5}v ;6Bz~vwuN)hIVz0#նc,ǝխH!U:SW !zQO][ \kxرyz0P+v[XC 9Fn[W@y)X(2+"9qLǡP׉(aȎƒsRII3ӄ}7Td峗CY;l7Wn:rkLͻ<>#cCsR86ovw =8N8fg管i6P"?7CCo\ ySXA'ɗO`mM`w0OOPY \9{g'lqp:Y+ Injٲ!- &-Ξ`j,]ӏN0\WuTvLZcdBۮNvzfp.Ÿ:=ʉFjZ+^*[Ƙr2 3A qM-VuF % CE}F1VL c {H"Wf?F^Kd۰|:3~ Pӈwf`saU.Yč ˌz8%<Π-łKQ5-k7Їmd4m6Ws|7k F?tGƖ Eb8}zC1 |.K6:xꤪ_\s,&1HhQ 9`۠гO p@1$j{*T-R3 b(;f` %H'FBmU|l|2wRmkipsf=0|<>j`}Zy) n|"̀=} 2g ݗTK7x X-(95{F4C]j07-A)uK{c]J!6bH֐tql#|?Ř^_6Wa-BCQ5}[h% @e8v='&H[2$Af`bEK$]vW#D\J^W<2~W4~omwT?f*D{!\Ec!}xIo)э .Ui|7="CY/=tK?/غzBZ.R kAmtWLӁs?Lstj~Q^4m*K[?/iMv F/f{:Ei 7pOհSgI/]G[ _gwxlhGu.]XH^?P̥lZ}!N .Ӷ5ux@ϵG NI5JC !/~{^VOx@S\=`@L]cN-Е%JkJ Djos_+~l>/"+I'K@l(\F>ɴf@Br!oxA7gMde>M<$oY/  5>v"gx]/lVq IFPrKllmOdE~O#F#=::_K .*YA~fOW1T )7׷w~GƄˣg?=}ӯk_~y޿W޾z/ן_=}oB{ç}|/ʏ/>{}x} ٟ~@!'^oz߽{S\ۻ^᧏}Ǐ>~>~݅O}z7/?[y~_>z>*:W_߮/v?CP$QNb||IQJi䡞R .̏|o#&evAK]*PTi3y= O(0?Vc%K2ϒZqjRow^@x}}?IaŖ傡Jߖ!"k'@gI`<6zf@t?3@>I3yI؄Q,n4z)CGkJ" 8TZ #]0 9B#5#ѓ:zOBUnT'UjLZB%vgA9nFvݙwgVʀg&'g&$/V ?=-9[Au!ot;  I p~{ђ^ό |Tƀ@D-͌ؔ$K$e9!@hMdV/ "!|D0(#2ʌ|zgg܄Jr [oّDzɫ85[0BN4{P`nz-@Cg{nGp4؋c儤]p3t \(MoI U Rm;g0$:Do JЪg]l*r<:))iCc0:Ȑ%4_'I@"AJz?eFEEN&@p= sBӐqZ;Dd*2T5Ӂ:gP< `FRzLd k[`m-⡞FmԂQߕ6A J r-|x?3K7]2sCFjXI 1bن>Kr @&ۂKִh犞a,ntH4-5>퓛tUt{mhɑ7[I(tJ.\Uω$Y d[0wg9Ca!,C%Qhl-I0~tQ&w?}lE՛n%oב7$>Q#Hw }-rG޻!t $8=D,*]{&Dh&|/Y`F#O ݃! 0D8gϊf5L l(8hS4ۭۅx=UvÆv#Elxngƫo& " 17b ee\HYFTP<\ꥸn[5{Z?I ?$z9dJC:Ut6}gQ*ت6' @8R\(fCFI{&=7ܢvÝ﷢&]77 D ކqQFQ#h]=zGBȋF~G|?JhOxq>}Wo~!NBۀ/qxէ?ݿqk#%_~6IYM`#JJ )r }F'͒Y^F4lk/E P_(g͛<o_dfnERI^w R>%%6J-֤(T51i#(rB~BK\ #7*`o$rU5bTf)z|=@rhyudu'5t {%s!@-ʖ`.V>ud}jRr2PƌRQA]1e|c mX\۴^J] "g8vY''[;^l;Zl:50"d(pom;m_R4dYR&뫺%!blG`Ea/󥔚źGVIEO('uFN[11(uKQ֊RcE|#_0Ej;r/r34,'iU[ A4,HaHuMsl,HU8zpdwk1u *gkS 9Q)F6ei{Y. \^! h++g_N ‰;|O^.KqV^]@ډ`ִ"K&Om(,2|ɕ{U ېmLN{E.X"Q]%uڰ|L)ՕJZԢilK 2 T$")̬i?#VA*8йEocj-LZ{6Ycdĕ2ebS0eP5+G,W$%T0U,Mʚ(Y|aR9iWˍGRR6lsV=ztR2(ZZƴ D!zM d(*tGR J`wE k;49rK8VfmvtA Y\U>>a’T`K`0CRŕRS|D1\ќ71OMJsR% 8e'DLLX@_c(٘@dnMEىQ"XUb ֕WhBxPOъ)2P"odR\%g3M. +M}Ұ{}v!YGlP0a0|N$ #-&!dQ/5[4 ڬde%g/ދyUWsE-WW2-Vc<Аe^T 5*ץ6GE̜zLĐ靁&!`Ș{9~2Hq({Qp;`Enf7j )Bes b/$.0IYc6$[2Y)cu唫<}gJsN J`+' 1F9.N2=Rm%J>jsmh ܰ1aԨǮ<,)TKMcL'6 : g R"实֐o# J.U~8Sri1Um))mL8^| TU6`yE Z)WܐzT[{%hMىU ^6umc[O6%zFt,g}:)gGQh6?a5g_HlW]:4~zMJhLivRz,Z#j3nF8L ؅X[(X":եkW뵣h*06mZKQU Lg9$qXPB&(.^xY+O_?ǧwgww/u5RTO5`VZ^2t W݀VZqe%>w})`--FТ z$1قW*wn$_)yl ;nQ<~}d!E-vo$ZdQJ:H$˲M_|V фº-M_ Wqa|4 ΈTjq9H.^h pC#8;p~KQ(lЈi"`qS"Tp1I~v`j%ѕ2 ΤwF;\55z%" ([B{t\ XErjD=DqO@(F9:8vA8Gqx +tU2p*,nT·B: w5D~E"wI \p)U]#F[roD:>njS5MQyS(cYP#8 ]LOHhGw1^DUD%dd.PY@p%lDV Ee逢󍩒. #Lb2 |Z8Kx߃hz JYfz"J:RS '"km3yg.Rs'uc l{Z)%U gUyEZwHiM&g+PFL\@Xpx:>, e~M Ln/#B_v6҃j8% r&W EZcJha=ZRwPU!/+ZjPf*r:fK a($!u)eιJ4nmÍk)H,"WDa. Ikbu]vaOz<soL 83V2&$㜵ؘA:NtR Nl ͰV=8QK*&& j%Ki(trFɆ.6O%$P" QzII`qf(H#S"X3H0F "!˛%- =l %7+!\Ĉ5!nfd_daF.Hi&Tz?ԕE`z:01"$|!(GHHL(YVQDNW=2tB0?3ʒ;hP :I'm O&0BV|9h$FYXObIRU\Biz$wR\P{Uy[U+t`$apPBh2&JV9pgAN0)Km L} OVo7BDJrQ.=X8§.CM$2BL{g&4APT@r \AJi&`;F&[&z,"4L|}h6۱Ls`KXʁYz!X?b-v:%jY*Bdf38,!$C(Lyd"Y O)~M$9cP"7_k{b:tXJۈb1",@zztj221 JL$LMW";Ң@Y=mdMLza4&۟[(@.ڧs:KT-M8y+L!^d H{a-e'yvdAYhؖltx(9zEkRl+Wˠ2eԮKFYiI+8^)'GI60Ù~5M3%c`K}E\ecl\1@PU%II[BjJID-75M-HztH:/'wڙ*),̪г.}l\EwEE#gf ل͹=ٍJ &6EIGk4)8V |K^Uv°4IA@7{!gzPtDD ʩ#L"2̦YsV#GU Lj=Y5$5X{GRYkq0*V&]%^g4)8`.*{*VpO`W.?##X|[!VD@אO*T#`3 de>1u$A>-hrp7-DŽmLOL8fwwMKTEG9(Jwɤ~I@zKa枑s<(;L3qU. b8nx1Qo=J 3˾2!gMj6{8divӊ776m 0Jt0MƸe:CByzJz8CHT{fC8K=ٱޱֽhդU7gf-Xnb1 <8T}H乡n WM$mgP00l+э?R^1W97leidQ3G2wXAa8,@R]7:J*POV}a_t.k6K^lv-6;<\ǽM{j~й>21,X5k{[5uYV}rһ$nA֔a]kqH2쮙As ZSUgXz[lnaObGfѠn%]G1)Z˱4‹|uۥ=%h '4fc'd{$ <7,#D́ZaSiKC3$V|-(ySo;~#{1b@59z;ULΜR"9Ā=C&tiy| q0HJ=Bqyjqc?ڎA@ѱ̲ء٤)֍o,b} h__Uȅ&x{金!O?sBş>r{%o6O{Ooh\w~}O/'7//޿l UBd:1ˊBM\#`_7t[f}9Tۄŏ6\ڭnHwd7Z`hK^~8\&anQW$7FmSѦβS΢ H-71LA^)M1I-\GC*&RX-ik(-?Cnl_﫴M$~0N)ŠA_}&ucOttMkYG>C36Xsmw8>.7kkCGReƍ$ ǡtҡ #PT7%uӦ.w4r2e4 ?s6u4mBMwpW4y#q;{ vy~;dLsg&۲el[T`&)wnJWD#uU$WkOouVs[,m8rC x!Yn;!蹛ѯץiҿ}s8?NM֡v]f={=&W&:cyE#䈵Nns2mnO1"ܚvwDMngf4f ִ$qDQM泥3*SF2%Ԧ@wtm>=cV{f^]VC.Q8u;Fi"͹Ua{ \7 YRgNfnULR:m4 Iuvj "8N7Ny>#kdz{Cn$Ҏ9Tcc}*TM\nL'ݾ=v#zI3M\n{iq6pmRe0'?DN3I{[=T;h,џGiV&,͠,4Y^jcŹe4T +&Um+ V~kOG-hV77лiUDq~ݛD{|w{Pbe{ ?U(Jrks0FlN hU Y5/g"6HJ d)?j*1e %⯅vG.ҡB7RTE265پ<'.f}\m֞uJ`_X6)LˬsUhCZ6e6xi;6`Ws>[[et(X廓woiWO cHppW8K/ɭks`J8ϡ؝ԡ"Q(s h;٤ ߪNѼ<D1@;3Ϯmoo2)iK?hÃVEN:gs_Rr1nIG'5u@sS/">I"ќNIYQbZU0^$ QQDEds:_ЪҿF[2r)I EP! BԊ~[S_)ե5C4"XD&rNiڹE S (V{3uR5jHԻ4iɴ?)C[&cVv u\a?N2LS-,O451Xĸ MqzRKUUJ,rCW?JԸTr yNiXĀϝB算/t䶰2,ZќFIt[-X%OPܓ߻g]pҿB},yh>eh#nP/2tJ}Sgh)_p@@Uɝâ\m %AJkˡEs:ޚԩ Qg/X[Z|ȭ >xM{3Lqg gOо@kQ _8c˟(#?/H}Wo~o1 [Do޾?zzgIt&UDVD)zyvd~qbu(p /hW R(O5C 8gBljTD"l@$v Jᒛ^ubp%Az5KdV/j4Q Pz\r4{jZF,0+cKt6iM. g{DԷ>7bFFM[6r^0yJb0)^1 uz|h1此*J~5Ϲ^cKRlݹ *5d ›&UjΛ~EFB`TbQϪe?*e1\ڹ)y@ J.%깙͠\3=!M NSp^ {V59ebp5 NR2L+.=YJPct([~-q~@5хb!F~n!'V@.:4w"NzR/rhlښe(FMfͳ8-5)Y>X$F.sxI/)I .X'PZՆ<ɤ-r,RY/jpQU4_Xf,Yam'!_:Ĩ"/J'B75mνyjh`'dMO qZ"^&L.ͭW31jC(S}𓶋tא66;:{= 4l9_/{N "=aRA#T%E tu6~A}I7@?6jkoy+R+a]硤=Uĸ-GrC)?A`핀E+,FE)oIeS,_po*ÉTfɳ VQPeiTaK/1*֒%)Jk*ٞ2,tNoW j阺Y3 9+3i WX ?{ztyt7 ߅ ֱw?s_$vF썼k-]黚;~B߿+,^2>68QK]hjinDkK&c⚻ƅ ɒXF9p Ӎ( Ӌ,U`mn8iEr.wY[',(}NJ6h9bAfZ<(x\6P.\&6ަhKcgvDЊfÇ epɒhB%IBZKw_3feS۞vγICWޟ [X my$t(^r^_Lb@s{B$\2^>j9·"lXCғ,vX`7ߪ,iX4c;yrVk8H+Lg^f0|T3< wA҅QIv(;r]}PMXIm@fI~fF ɨkM ۵-[2@f+JРVBO%V9%PՓ8wCCah.qN]!M}KOb:ijHxm-0ȼH-Ar}+$<~ |{ O'e𚝣57c [6ٯ^krZUB'*z0ȔEج(i5PNj(bƴ2ϯvfS2pdi +růQdd;^ZBO*A 얮gK(VjWz`n?6gsYYYO]š*V-¨kʊ'Y/}c 1?Epc.J'QjZ:E:W:`] O}ENfـ\/@BC,}Y7h3y evۮ7F*hC_2I0AmK:%Y.g==pV'a+N9|?gu,xz^ٝqW!^K.gz|t6Ԃ7Tgs^\Y\/ |.OZx.'`a]a9,7h7ti|<+A J4"P$a(7HxR$h30N-x&a`״^7AE]ŦQ]7844*UOZ؎JZ ƊqJB!#V'\pD/;RH ` /)dKYo@ϓs= KYBaDuMӉiؓNwo0i @pIJƧì9SPUlLk)5oK鸺Z[)x`"j;g ~n2`;\<&Vl̐}P8`yz[(i ,\g6^rvL̟5TPMprZT=lƭ7hXbxv ~\_^|x.{UՋūׯ^??z\w),뫿?Bď?x/޼~_0A|~#Vv l^޾#_<_?~~͇O^]շwOoq<o6.(DkaG$|Qpq z=qY' hR=dcڮwPk=Eq[||)ڝ )5{Nj%q_|U<5j"n%ag)IYSb`rWsqo B$.,Vy!CѠ 20YHݠj:LTu1]m[仴K*_5AH}:Jx9=gI 1 cPٓDdl8 QYFdht9Z]9rZ2kA'6|p!:I3ѓFwΌӎZ^=1΄dK֭(l2=gQaͪ{ePMItsPyJF:g4v]Z`)w=j!@DY:&,R4jEM Wx7``"IũˆP\ĉ@hFD xs|x\ u2#puU@5eC5<ԡE_,At]ڬ힎6t+ؠq8lPa;v0#3 @%&5꥚uʍJI)%Nϯ[g*0Me=JYh'5J[]݃u"n|rz5py"׏n?<ܾ8ip_tuZu̠ÛO˗߾/qoNVW\=~:zg!L_׏o !?>??_ynI~&}^ߦ3\7׈n}?}77z/%B ~}@h}?|DdҨ-"@75Cm\N}C\t,~#8-)w (IX>~͆,8SU|+yI[/)ُ/`Y(6ErjsuBF<-z "Ӓ* m/:8X!8#PH}XRrʎCpl&`w~*l7v5x tt2P((NH`Ҧh;+̊]Nvεs.kPUTѐJ{9NŃs)>15@ Cٞ\), T4aTW: y^ɱRb44G"";"J@8s &OZdBH.2&$ _bFhj#,_cYKgFz_><`h 3#O%uQKCX|5Q+9XӜRUܲլ֤h/ 'Xv=&\4"M1*X "Ju˜x%'_ϳۢK&Kώ*ޠlŰ\η9 AǧӬ|Xkp5IDrmq3-' 8rBWO\"x+b |W c%%F!ҁ#j0pjtk.q\ULX rPRGdfa; pRꮙPj64W*RyI-󤔧]gq2t}ZV)Ş9æ%Ky3'0|n.8aAbvTϴXd2l즜 *I$ݛD֤HU 1)pZ0X*g ?0%T&3\i$J4@"o\}`(fbctHB:K t6hx!Du+q3Z OV)p:)s0A2/ YҁbUt oͤC]͖e'7|#h )'g+ ,^9&ٮ19U3"ew(VbQ08YciU 9uR<_7;LJ?|~(~ן:E\}{'?'6O'2Ɯ\*c_̙>?9$=x3w@$~q6'E:u[SX$2e!Uxӳ6T.瑳˙#"Z|BSn@G=.'˓3.^R_eaCu.nIU $n'a~Y ՜t!;C)܂$Z:Ld%NNW bi Y@@k>|%~أJHDž\Y L5 ŝxQrt#HZ0]D9Pk=XEWUũDt0 grm$N`p~xHPMՓrSl 3I#Hn*ˇj'l>XVSsJ߰XkP 9^8dNdyu9LZk\U{"UXo"]n _01U)Q! Ƞƃ ݤ$5ݿb_`VvP lyalt\)Ss m^6n>x\A2(pHuyvuzk۔BES 9'Vf)ket kBkW@,&4Ӛ#'v\l*O/ΝXn4Vgܠ'ssq*m$V^r]L. 7xFS1:ZtIhۄE0k +T<,p_ܼ»Kj00&V`t,gPYom06bX6fl97K ( nkF@>%yq 8YW8xNht]s:;yVis~4?E[F% &t@:|9X(L q{6Oqj(9(Bf2 yhRqV's̘tcOTu!*AQ婒˚Z1&XR:H_0 Sc3Z%ByƹfI&j@v*7bK,Kԁ]D<1 AzPYSbDjPQȖUZC4Ts*= l=G glr D|CBEUHΎqŭEV /啴uفɊE@X.β[v!3k*!s<́T 7cG/,Fx歪+=O@?u$ЂL΂ ;覺"B0W*j^򤎟 7roX5/rdDV< "YN`p yV"=4؜kRp2ؿ0e #$5(Ņ1ĐOj2P=9S9K^5*>|}c Y)J2+nϨ065qFV+90Y!]'zI!hĻ Y懜DaKe^&}+*(*M"u OڻGJprxOZ^ FF6 )ˆNѹ1̛]?8C3̣1Χp;=Dǁ}'eq^uM" /۶Kjq|@-jErrU<^9vw[J6Zyk,6l'>q] -/+!ӄo gI#Q&ƹ5ѦҡLi~TeWjč|n ^4H@*e%PCY+&pDZ>!veTh=mB(]ۋ%u2֦kWaj.T#2r.R t=tLS[ɖrkš)rBGʗp]ظx.%;n8ZJ$B5;z\E=Gp5mvlmTF4jC3GgJ&XOhw9RsXv`k)q.[+BMAs1),b;!WOq޲_AwmdttK@%اe'WFHZa'W̅М88P'GawF15:W&WbOF`;/6ve6 yTe{uխn2YmQVe4ޭ !L_KUyz^}Ee5&F̰DzǵaVD6vu>Gɯ$KT82Z Wi 0*, JY=kf]kBPN1BX&ji*(F?IɇNJiOQj}l5֗tzvMmjz[N:CdƧ.LvMb=CH4P*z YOڠ^Ov*Pw%~Zvr[DAj/jZCmzwkbs6{.^R>թkv;yV$ p\'%ǨW|M4ћh΋\%o $Xz@ZZ?V ݻ} %ݧo z`_D_׈<>A0o҃ DYK5VMzgp漴6AMA9u@_-*R29[s4\NM@ .;<ĘVd-Ť Sr +2sm9y^-{rvLҰ%iŮZ=-x|U2k=O1hkgAL聰Nĭ\ v\A9U4CZ ǃ6Wsж.'zX ]c|}(3 A5}n~ Pp4ul?$s4mXQߦ(o)s4 8h$obRݖo~2j,==ЂCp5-ߴM>#[ VRTmvVs%WD9:( USRS$newxC:u <HcQ6˦jag>a7j9On _ڈBC%,}oGgËUʴƀHhmM@D 7#,VeFuޑl#_d>N鏖O3q(Q~/|g|*TA'73]/8z_QNGagwoe|g:*(Ta, ?6օ%JAi/>Q|ޔI(/0!]FhC*/0Afa 0 F$E!NAG+ʈ$kZ'y4/|7LBϗOU]XcœgF"^naE_ք:"WvWHhPIIF$\aHa $b qU=Z;gIa'C_ۆ0$p?ERUJ\J y9>ENȺj.Sƣm$xBL!n7xX0ZEZMO``l4PƗtIIB{Œ&=Xm0c۰@{ulaP%pH?9A!)|=#dCڕ&ص!0$`YPL2Rɔ`ㇲB Y9LeQ$Ʊ&@\ 6.LZ9& $%59I49FVLpUEPABP,vn;shƣ)ukA_Ubվh7(E|?Nœ//~/_N\|_>wsww}{w}7on?W.^_z_o4>͇Oǫ?r~Sxo/τ\3m?鷻OۿW?|oo~7ooz_¸?݄C?wʓon?]|w͛\޿{݇x_Ny'/^/Nj߯_zyߏ/~|oׯ uOg# ]wA\?C "^ `+Enfus8pI\`/GkUE>i Rb$GGl$}mgqT4\fe̢RB6ǹ|]ݣ̵e:=~0}z?.Uq d'iCFCyn+LXuełL|OejM=L 6y.oeɹh{{5 \z [ >F@i_iXhH‡֑)g'ơC% ;E3fbK\l-j,^Dy|Iva6&b8/i *zt# SE' \o%Jْ7k A%Q6 .ԙٜwC?{qI+1=b0hd_T &j, ̯naj3<.2^H]042se탾WkZm37g%i,"=ܡ duTZ_t;e:`\=!˶ 1x P،  &lb.-Cp["H톭ӦD!p#)ct)U2H<=-h47F#F06Ԣ*v*#Y3~-cxhE:yҤk,]::Mr sfTsA߶:B5fpbf6Zi/tnrY] ,D1*!F6rg+\u4ՙV_5a:G+fF274*j]d;m;8ulK>k1d¾p<SLr;0@.O,F~ zjGaCmjB\x-joZauF? A!qa"xk:H8Vf"SE%[,]E0gD4V^ t Th!סcqPjH9l0^ةl-TYv흂-2'{. j4- hb$.)!pi"| 2@OJc 9=ckj{gѫ%Dar.ެ+ ⊁y ch<(si8!FI@.b!GM̾C8XSz[FCMeuYsZ׮y35f)})}$~a4RM7&EX MkV?ɀePulFRߏڡ7*"ꑇ$3tk"}_")Uj{ߧߎ%ȰB=*VFO9yb6*% œS-!5ڋ}|כ}*߾y{@ӄ?"DT 6F|`׿~ ɿߞOgfR|W./Wo^]omM*n'<#|w}/woH۷?|]_0My7!pg F0%0F@PU0݇3]aݪ>sd39S`G`\(=[[2w65qo9ٟQTm9 չ#{}5;κZFSd9C3ج&ޗ,XG0̷bL0yWQ>ɠ eu`>? q};zcʝix Ǵ#π&0[% A/ WHYD 14?6/4LYL2ZXqNVe\`쭌kN( Yo &L|\;Gg_3l.5F%zŋM!SyYghw׫7?ӛ_03]SH?7~) Rq/o%"e &]yHbR?_oqw?HW f>ۃ~ƴrj R}<PpTQ!a uFOv7:,'o˞d+$`TA2ӱx(&29CNyG鐸J/X=$^kSNR10`m>`T.bqXר,!O`e*19Ԧ|Ykٗw*=ekfNĂ%~|& 0X"bLu+{4[S\b!$iAQQMk7%$rZ`kJ Τl>r${b:RS}VFJNRNպrZgi#Eئ*e@GY,If QHw!d!1d%}xpɻ* lʐH靲 %.;pIi&v ұ*P|eZiyURN ũZ2J/K1q!-OGIr^ /|` aq]xMtj⤩k2xS%r>()e]Kct`=ȧ{n92ŝJal* kM5 lXO(\{ v I='yS|WdNH,*ZUb"L"v!҃E6'Z;LEd-]l IrRF5dk,!) "tăKUi@'/r^kVzP1!7{up!z߂{|IH]gz\Bv3҉u\Z@ٞȻZ:)rq,$xs2d:ñzmIJ@77[iq#9]jeKECt*z*`  d^s wa`ި,TXAaMf9lܤɔ]`*La&tƣ/hl. [W)Ӷw |%|ƓQxH_S"ȴ$>XldङXrsFǤxtw_EZc]&fjÂz^]:UjɓB0!zEѸs"YU1բUnqp1 ds0siʴ0J& o-/1}=,ߚ@.n ίLK<뙏}jM)A(HtYųO3[J,됴g$O#{:5%A䈩m.GDqǦf_'qh1*>}4OyE9! |gmK]1P @bԡxSRn5ҙ4J-L.5OU@!-F5 Uc/*{vv Y%MZ(7FVA/i'+?m513ahAܾ#ʂD`|K*[Eq_غY{1?aeB? Tʔ9XKTf HwЖP &FS֘@ɗɃ'1T`,_Lblbʺo=D__k]`Tx ;Y$1`gHO/ܛgB9ϴIk־g$Zj@<dYࢢbHit Z7'wDmu&G .6Jd[ ̤5Ȱ`K\5k걉< 7]T[niպ|5RsqP[sΏ .bb5qIS<̳51:B3ghӾSS$x0fo#uqrI[! &i4Zn V7Qv| 7+DŔÜƳ g“JWA2;]Ǝ]YO}k{B  @tDaԟocْƑ).v %c<%mk_W:RاF$^JR91%yX6ȕ)3$mյk>6ؕäi6'ݗ`0 BIxK-FIN\ϧlMMxNYL7"8kl&FMGr\ҫu1q[6X%A]#9!}4€xڝO:מpLX¶&'rP*fgG&utB%];3h%` Ȁ&e]"Cl;fWL6П7(vʽcҤ5T.LnGt p3c5ux_z8>=!ٲ:,tf׹Ë(0٪%U(ɗ-qNuʕ'*#D'1F 4+n&5m_X)#I -GI.uu/6p,eRM yØ$0LUZ/gΔ@C)"] \]Um;Kl75M7ͱvt؋lؿi:INwMGwZرR罎TXt Že*IFBۘ Zpz1ۦ[$;u)֙!>آwDZjGℝ͈ZnNv74q%;==M1,%\עS6;ܚ'4N&otΔ8괞8u皱AmoG2E:=Ԓחe&P&ߢDqcy!Wqܫ{^]p N:>{ہXnoH{Ŧ*pK2mӰiC?z1=lR}# >C>:r) ev~A0Ma:نM]gh ΢9VI?b(jn'6Ȍ`e_&FVDI7q=U8|j𺍕zՏ6%v]-?歰ӷ׿݇zn33ZvX x f_^>{ri<^ZӏAc* Ns24$OH)f5d`^1AQWbF#sԻ9N~Čm)|V GnmP]w[}SŞ=3IDe d=ڝ7c>Q`! ʊwT3;g7Am)tPj=?zN{󲪣 Y2Ŧ9Ԙ_/oҵ_x*Jٗ#LCtDk~N) whzuF.]]9.m!{cs@&/!lɈ3gJ#]9%$ ŖIZf3P d0ŁaIt?qlMykc>2d 좲dN\ApcկVf h1gW)U&J}fgX}}b_نKqcw #QvSSv,A8ݽCbX,*&wnnH^霡GtӬ/)DK= 5:0K Dk2dƘ-01T#LPU)0"hcwXI0*QhioB,6S1He >]ЏOS,{N< G9)w#){cM s"3Ic*U\][p} &A)y-ԃrKZ( ⛷?/pB *Բg8+sy3*q" V|%-[2rs]*]XnWF">$L;H/~6 + AB"ZX d;X'&g3̈/U>EM{%>7KpH<+ So,xy/$ `#-ɏ. DԸo,yŸ tt8&p.|*r53朸*2󸀁ݥ|1,],O[U!bwKc<U=gzvj`Q^ #^ ܀?sa-q>Χ}}V?wkdtjDR&/uF&(wN{1 Ϸx A̳:Vv/zA*w91 O6z!m# RY 9x{]៟oN ЄHOf(u!,g<@,% K'_{=Ċ ͱ1'smM+!Y KǞY@.,vtpxz,`AM1z.mOOsfETD4-{ ǝ+WKD2pR<Ԇ(qcrqLq&BC,=k7v|Z_ZV6Iq;U(`rH稥#Z:q`eԭy?U,˟f>^CqU*^?aWyYO"K.=/VWkyafy5a|a+U~:چh/]jM&ឬdjJLܝ ǛL_5 cu\blkXcwğ0| ۾Xª}d^W8WKGE,‡{\=^ <,\,#r p /Pg=Yz-V BVSxbKb}TwM1)dݶ)<.>CMAa!y+NqYqK^HuX-%.\\J"M@aN;%Dh^ڋֶw:"E3,z)3I[*' 2oN%]f:BmѧpdJ2v|b95Yxoټ}x{{f!r?3ϳ'={2~_ɋ|7oϯ<~߯O~}v}~߷ןy`yH%''KҶ(鮈q];@Um*!}Q0|[yXTo1nr& 6X-Iâu #\3 Q @dfAreQkV߃zDg\&[Ҥ F-ԛ3^7Dp \X k"^qL4vڀ[`5(N8ۚSUJ(m ^}zXW:2x-!_ȵ\3WSͰ͸~,.ȴ}PJ5m4I׌fpm6_>D:9E;O ٙ"n>+/bT2f_iDoX}E(e.~KsN{C{;J#MًbtyA]@H@)PpمԪG粅st ((]`dLF[k.e Y{(1E+6tCx<!{-G|Ky0LhH${1+] hLMAa,6ٙPŧ?E9B̂cMak~F{t>QeE9t \qp/j@5K2X$z5ꗋ.ղ$#/wxח^T,?|DYޢYވY>6K=^n?܇z(-ʇJϳmmq{/^~O/ݛ1o>~|K)k(rٜ!0UR1b$}򟩚k+x@KƠBq9>IP:\qkۖq!l׻}t+50G}ɣSZwq[h'::$*YCWOLn\VI4@ȴ۷e`n 4nWM}.U$ T8q u &)/DzEax퀄]ikZU4ޛ(稗~E@^=4FdfT)s2Y{[vy,R9eD0X+Y耪AԑoK׎`Hw5 & ƵZ q $amO[lp:iSހl`f.[0>j4Xģc֡S8t=N*Co$8` 69QL^'(!;7j3G[~ T!C4h؆ZqHh%z#2ۢZa2fu0/|5kW"Io*Ad+5X [G{X3xEvj8΁_@/%>:6,Q4c[8ZQ'%i2Kcz r@/fPF'P"&t1 ehKfJ= #IPVҏX x!L kdUAfdX;xDٶL¶Jx\v# ?pY* %GH@>jA j\S4|#n%0횭 ^C 3 `M5lP$|*c7kĪ6+ߑ.'1_|?&~A$gIy@'SvwMWY@ȕx <#5 T7NԂq(Hm*WQt<' pA@& JoBs-Fڮ+3" < kܲv3!{6k~={`xLràj)h-ѾJ@P#)kQzŠpAtQi E0hP +R16YLj*m #"*ڇ^3$zWfä`\Z#z x?9j!?thx<\*AG67;Z\eD$K&CgJk3dI (rW"*x_ͮAeTCAL"C :m_-ugөMg\S;7ۊNN[B a=CJ(s<7D1%XW<͓5C !И2F)g^ \d?yPQ+Diu ywCû쒂 No M$tцP(<,X݇Z"oHL ^bʊtࠑr6W3H` YUtTdІgd ގWGl!Bl`;im'!B¶ڌJhc$'LZkczl^9t  7q9`s Cc?uB4KSgHX쐀|J%CHKS`'9#~%SBa9#=B ΰ`戸 i>YަE HS|` @\>Xڡ;Ig4 #mSm7QX&c2gG<㘦b3\0UI5)dNwSHc HueIpICá P6_c+YQvSΡ!Dձ=H!)YdƆ0H&A~< 0O# ml)c-ǠD)g:z.wRF|VEzٖtҲK?zR?_>!r>ǃ_0K Nf >U~Ā&fLKA@woÙ:a?QbX[.لVIŰhט9>*2SR$i.2YFOj/kQ,&:#=S t!bp.=BZNR rVj$'R\SȨJGuD tLܣ 0>,$`*g&W 5GQatM}yiV7y X[cr^ ]EtRGL\M1T^1L`Kw$׈`tEЃvzt{͈ "%U7FS򒀾zm#4=f9}Am lbf|+G1e{ 3]R }˗%ḌLv[TA.-əkkElXR?7؇&A S#wvz#,σCP G`e7O QR&@ej'b@1Aj|坠aS RPur6.;>;ڑՎ? D M>ӪAbV1IO1lo `B h6[ 7_Cs-MB%l寊RV p&[>; +V|E[4ꕞF #e,ySP8/QfJ[;i J٣m5ב "Zwrk~-N!ߞBap*;vh$e$nB8$h:iPuDu<%LʸQ }>H{64geW, `@s8JVz݉{Hf±m1!K`l+8XFXD/\p4doDJ9>@'k -pUJIJQCKg=VTkn fv| Q ZSdckQiڲz+G=#`Mw+g!)[팤3!G24M9Gˌ"%w@&{qB>L~e$yt)CO=%ҧw7RwXc=ݗTsGsbq Kd`)kl_MG Q G-@gTϩv>j;>`= Bi>4:g#Q|ۃطW\70o.)_`:q`_h; 0>7 Bs4#[i"o|4Ow}}f3WGx68Y[^-qFŪͣaȶ{FD=+`#)nWfkR 8㌮7=*"ݱ~c{D-=4[ǥMSQ@U$WŠH]z,V"JbdʴHҀa䷢|znZ{jϕL ކ@;t-yiTCFQJvF0go6Tr1` :;5k{/.,rJt&G:(욎u*W Q t塅C50:$N.TEoob;G}zw*HwybNKN?-PsRw-Gٮ*bQl4jCb 8w\zuM1G'scyB/ׅؿ6p!uqӴ)QzmIuum]49E3hJ. _*Be*!2?z%ZR;N'O7c^?(@UKeR{ϐK{ܮaZ*_!qś[7Ń{onfl'FthX7rhuyАN>>CaS>_<4JujQѩoݧ~{x: Da+{ʥ)7FTFPcfXePǡW8d YЫRkbT8Ơ?s}:o[ !uLPyt[\Nhi݊C1(jvZDy8ҰN ׁW]TEk߹ r[$k^2(訌E4OGTvMΖnHȪЀ7L&<I_sFtNv![ᮍcHR v@Z )DЖ Z%Zm3A6άTж N:wSZEc듇Vǧ*(mH~'VeUp`g]!?RW2UU# M9Cz:E%߉ct;^^C<ҎzV[mͻ6VB(0gisP^IZż&.+%.:~W`ʹWp ̱g=Sl`tji -UWA[<-UҀ!?kY' %!L-"1NcN΀# _; $=jz+"#.妆!U .D@C^J^S; )=H PusmHGH@X Tsaf͌P?hGޏN*YK0q1 dkH]\h=>$U5Z 6YJ-Q*0o+ uhS2,Z*Ѯe>%NwPO֌Th%7UgJT/u| &Ӫ[Ok55;VMv{7[u<s J^>NKE$/9θ^[Ʌ/Yͯևe g}_z{cY础 IVfzo 8$5W>A>KUнTc )WoT"~PvթI&]<~bޘQ/?z7嚺XJ obqWP|xz_9 ΏΑxwIG|#&vA43 \.-+yUԜoa5zļ2wX 3{yD;e5 P4(hDJmRF_"i&a@b5OQ)0KI VB &1{CV-M.Uj SI˼s ֠a}ZSAV K\ TIbϠZh؋T9XrVعT<+*J},ed&V/#O=ўu.T{R0DoetlM%}YV01s9ma# F{UBt'#:%$ s5|1C7(jlzEMA;W/-QY2WDbVg.PmaN)+]]"A Zu3.% ="Fؕ`w'ToSDbE1l1EʤNsr"&RS!=iH?C#oW}ns,~vK6"U!rS cE Nb7Uf= \k&g*Vvm3>rJs%9NY;\gFNn9]I3K.~R'=BL˒mBYB RܐM;IT)@2hpugCpE԰)4Õq1;ǣet!K%wA -WLp%Tќg[Q;3ǔXl[Xl6Y/r6C!o޽ps,]?HW_O_u鼨[X?!-,ٖh˳gCh(Oev8lNJ 1j~cNM#^y~],[}'e6v/1R*Γc>kJҳL" ǀl `d3 8ƦwɨQ0u\I=gT0%5Y@lOkbvF#K:ZA*ŏ!{: U50OTl` [:5@Lnn&f3H9rs -Bxsė2Pii%T<%0gTZ7!x3)"e8&%JDV_k[b:wVug gH9/&i2àO{dg]%^+=OבD >/-fղ 335n\Ѣ(-@@~P5IFc:]9mU/~'F4iÝimO2%8ޭYR Aϩ(YhLH+-0u$hc"x_,o>s~E2ni,}SrپsE,63*}gl?y].$(r,"eSTjylADEN{ )nٮ1\Q[ū&OLW ppct0T^Hϱ-H@X>㸅SoTR6tSM1o'pIÞ!"@n4AqUjLWB&tNa@ U*Rd Ƒi f(seI҂xxHyE'aHa}q> ~ل`8G}?~ʷ/5st_[L)Пyy\R͟ajӴ'7pG2Ƕf \D FjJsXVwҀEnVX1L$pCBagE&I9z6K{0h?m*S*!?:[eCBN+VAխJGʗ+VA' ,)KZIuxVXy6P=5YJL7L3 x7$PaBυVvzic:zp@lDx^"sʊ髒\GOWS.3^\NLÖsj'<'VMkH\X XvFnnM;hJ-{sKA jHG1N39N rEwlB> fa'g9Lo-nb)Eֳ`4}YE8maȞvRٔ$l;Ā%LճԲ`uԀp2[$1Y=[*2kV'딌?!UkB rRuN23$◁H\Lf~ hsh%WtTFu)B9'V8s~ڂc LMks@uBC)][o7~wv G 0I9o F YgO!`qoІoPglЇ|VvCwVݠCA&&!DА }H7L'cmR VHtzg9ײ êJs4[UCt9yʾ)l"Js Iч|2\oӎ[Cg+\sUcVE #Ea·!w8}@zy߬V2~0}DvtAMnDA(Iʋ#?Ouy~؄keCOXpM}aƪx-t4f)Ú+:ҚbCYɪv\f,Ȼ S B)8CY#mM a,asI=ׇCHچ'1!3&p%j=3{Iv i]S$}v/UD"~Xnp'-#dn aD1z^}GzGG]_\㣋g_j!Ky_oˋۏ7n>׿p?:uz͕݇77o?\?^~O7?߇߿=}&{~* ?~*nzۿ]_?|OwnnfxMw7nonoo^~}]ċ{S6s^ww~ۭW_/w_/>3~{un>^|/  _yq?q~? ~Mm7/2` (fWqxG<[:~(/pZF[$Ar68̲, :!ߠH-UA=SeD>H?[ɑFĂ1Q4L!aR]A|KoXk i)/.iubKj$r_`dvkJgpFg". Mi ?(AH3 i`GFf[3Q99j\akc!OB" fltvƯ +$nHώA2E,;-㷋hkNe6Ka Qȝ4):ѩ Є(KME}qYٛ@P53]B5k eYA Nj,"%IfݨF< cǒ'tB̓Hr U*Z'LraG38fEZĐJH1 |L;I+զN`dYֱHRFՑ| D5imc| eK1;gÐ $cS"KHH(#eA~@YM5CѤK<jE:8PZ2=XV8Ȅ()/a|U,E#ܷ ,yw*nq}d6+R 1%G.8P~>W q 0W|DYGA&/.mB3Q{,68ZAUsob"Oy˔x;p,LTdVhVHtjzKk;ȑ^I 5kK' e@49GiȳHqgqgsttH_44Ǐit1hgLf$fh u8 +!Qjֈ̰ȹ@e/p:[,mIA 1YOƌgBekj(9F2ꀹ7Z@LUVr]Ak:kJ㄂\=6Ilg 5 ExXHة:7HXc RE"crCΦ Y <8yAQf8mIq<15 !,D`/EA{(/Ce?S1F)g00}0E2PG>jM #XhWv7fq!1NS |}tbp(y2І)ʁOY2 R(Lz0DΜ2Vf7%aJŒrbsNarl V(r'K)EA珞UAWC.bD:눋ʐ~ū?YH!T;gO}S%\>_J߼~ֳS蘂ƷWw"O 2:U]֮\c"KN*jn<,_g|!#y.(#G'ڨD,Y6m|I)OH{v<'g6ht] !\Mxkz/y4 ySq^|ڷ|z!GjK?Z8O;_czN NsjN/͍1GyZ^Yb1uvZlxڡ|S^?N"9bEl*gם:}eyJL1q@rȣxSTt{4q .fq!\ggHn'K3>J .uDJpnc^Z/2+(v\ϗ ?zVڳ!~JB0:Ges%^:9nW2+yx竧^Gﵙ(_>V8=blǖ9 ۙ\ Cc̵눚<לN YđY*Pb}]ZVd: QN$j/: } 8) 쮯k{bO%ӭX6FKm-Y*xѐbȵb@lլZƧJw{>Y'1v}UQP7gu.;a"_JIW搸]=_lwD,Z>5v\kHǚc-J+!VĘ;Wܲc  lxVMEC\{SzC'CAOPyc&g-)¯R玛UȰOyz/nR?/JVcК?&Fєc' ^q@085#\/M+g 9 mPRz ьPx2E0|UY q'2 r"wo(%}*B y\|jw+HxQHQU $J5Tx\"sq!fd+0\ @;E܏7N5`UMuANj81TpbJ3^kS2ɡ  ;]ջ73($8R#2("L pRo5Re r T3 WfIsĻTn@TCH %%Z@i4^i(״P:Q1#G=vJt <T"0*j~ }\#Ȑ ѺZ[0e-lϤJN8-R|@6U)T%FP*:HwEtf Bfj+Y:g6'jYjIeդG*㼻Σ Vv5||,bI>ad+-BP<4=X?oJZZO:naY*h|nA@j@yp쁡9 0toVyOpJ?9)v\ʪ$*0SSXkZr>U«e@e:J8B(4ӤNKGH8v*baْ!P@Ag\6hY 2JcHz W̆`FA2&7 @J ,ieAO-sFF樀;re'ЎJ%;ҫ]fv/ik41,j܉3|Mh @UZ9_f ǟ=ZSScv^;7'M 32r(e,I`Q'Mhuzc>ϝLN[ArW`)Mpj{0cSA}MmS:Y_Wa)Fڤ>szڢxC֖d*[^G:Me墆Ho@oZҔ&-4u.jN&,7{΋()7P4m\TNUWP~ԃnrMT` ^ NmrQo*~(8{r-{RfYj/E;7TU#7-&ՆQU"e&j =)Z3>铋wn(,'Y & k݄:5FQf01[߬=YzTc+6MZѫ;QR6 UՆy.1WT0.Bj ~Ct4=U:{|-_x 7*;+s΍As͚onpCzN NڮA+G?vX3S eҚO=gZ-1DN;]Ҟ^ In2K{Hv 0vebeAtiu{;aJ&&^g8Kz8w ,'acݖ|jݔ:r\JFiV,uĮ ocXoctV(DȔ)S\/^ֆ @q!5BaIYDR)(Wf@W^sLDQu>N؍cbUڐRkKCQr ,M>o8)d co'3HMNCQV0ߌ>ڈB^gԾ*U9ŰwYJwhiZܘE6\DUPC7fSMQc5u"%AAddxFQZg `NDF]Up&QGnX({SUM>R9eT2K;C\/uʜ@%d 16)*3 V:X,CQ r:;܈ lOb0o/fHA`i5PuY+M2so`T|ƺtKe>4}3T!Rwt9RNFFxΐp(r"%y@E {@Yh+Rn\#!mBQ{'agκvmYkARG^S?5r٣#mh׶XWBgڃX]'MmXziҰV`ˬ6{W-:N-J<|o79Ze]jra]>gɰ뚫;tdڶ[1Xgi*.kָ+HQJFe*jw[%I#4JuCzS*'?=ƥR]2K(c͋l]$q# ;mӪlCpWInEKOJ(s[}8IF=x-6})"&0ʩr wF9mk 3W3 [`-+DZ̀=7o!p6^5IEk>U;~yasYrfD"{`S}D)=E5=L$OuT'!UR͊=u ܳk~dAQ.h~^sԸs;^U{b.KGV`ZZ[Q.;YgTvHZ[7Y"=Z=Ӳ.mSbc7AǠ`&|]kڲz6[-Zti\Z>4[=7V{zG)gwq>𩞕>E-hAPO_zZ d@^Z'>Os=2w:7p+3@ýr;EIK|% |\TO|r҄i3Ga֞-'uqP3W,=U>$b'm70WWM*!hG% c*K1A3eȲNL [rMB]NGE_x;s `3y6)s9Sx p>Lʕᅴ_,51f;eV>El ^?ʚئ׌"BzKpfW+ͼKuHdMC-}W3RL*'#Rchv*BF<8S 郇Tv88uب~+[MEŞ&0x"qC$$mtrA#@Q t< +8H4;15dD)uJuCJ`aa<feYX@RtY;$`ĴT̸(E+I]eTÞ /ɑ7f1آ|XF2cEw}Dq_ɥzـMtťyEA4Zn)Mrb '!Gd(Bj#qȀǸ1_YEif>dB[9PO{P*Ua)N@zorHUT$m"FU+{QAcp"V+;To(Vʸ:+^pLrj#"fq)jS8%QmNK837xGƭéi^8գNh$N5g#= TxbV)LU+OsCcJ<0Tyu5`\Ѹfp@5E+ +`Pf4X[ȋ[G/i<36N*ZcMX`^˟R~ fՋ yq1QWAj5VXm ѾJHK'PERBeIIu0s0;Wcuzا7Pz1V( ?Xms 17v.71U./ s<:jcGS g:xzIxn(aCj,3_˥ *묌\G]NnȋIt#զYw(P(,-˺/4>TRgnPS*qU'#!UVF5\pDUOE3Z^S1r)%c/v,Lՠ7^2nZ TFbO>CtbZ>4PC.BY /F@§BC2}Y7Ԡ(]q'* KdcBvrʐd?H[FN tL;X}|9&7qG"%Ǫ_QkypO?lN#q;Zt):~ӇWqs`a3%,W嚓񺎷~Q\C=)y%1gx>MOVYqJ/27sciYֺHPiS<1(͋rrzR,]P, /-ݸ!dE ?ә=9=>{K;| =攜&#("ww*RW@R ֥ qɃb:|EM3t9ϲJӍ4tusS_߽7>~gNj|tꫧd},W?U?o|LJ/7/Qڿy.޼ëMg~!MܼEty-D/J߼Ooˇg߯ݻoj}| ><|Çwoo] 7)\?>/?y/᫧_A/>~|t||}yu2/?__#1#M<(ͳ͸@a>FJy1ӣ<|F R yp7z]do׿K\=q5BcAeHcq"D1b@gx>+NzPv4]vSca\mWw] rZqVv/ 5MCB:jq-NLX- *-3 ~V &Cڬձkp\Xk ~b75іڭ{>sRWUOs{2RKBFf-f4 / oL>)M(pzz՗x2؎gE׎eeAk ZL2\=|_CI2|ÿ?KA?^=~z{PZtN/\}?Rvd>K Ӈdj@i_0t(( ST4+Ր<70@*mIId1qk t5ټm}ơHi 64ԃ=!լWpޖ_R0'aɫ0(C y`Xnb!,Wn(cRO ˦ DI tӸ\2D#ve t1np 5ath䱤9myW+NNuqޗu*,R$([D9_f!5CWtR!є$@X.09{̇=cm~ 4xh&s(],8v󜞉5>ܱ*,1:iV=V \,RYPhtTh6ٌ\S*M .ovEo՜ |FVI+?zI8\b\#T~_}v Iy>5<* &Q]S-j=fmuAͭ."jmRmeqB=2"ZhDQSW9MDЊ D>IfNMT nkW囖#zan~jӨ-jkEM n\cB,h#v!QhRŴG[؉p0"b&[x5"S朠DK`-Qjq{5 z?`pW;u9 Xp̦}ˀиh-ʽUHrզmYæ<%r䋢'p1e|YL&KaE j-3aaPWn&H|6Qvq 7ޥXkV> Azȇ9in &쨰ߜK/Q P!VtB:Q,2h|,fܒJ\3rT -E pAF r:8|[RšmhF/FRUa@[:5\jVJY5%Ho4ԡ}r9m49$rj"v#?b"D6rZF//ٓ '6V FP]nDm֤MReV( LPގЎ%J0-S Y H/^=Bi%eI0Kb,?~?]EsGO]OUIx;%I>onyͯ㯷޼~a_|SIo?޾pi[BwR;?)dujH=Eg(MiRMfr3."/eڎD  z[6)YtI!v|B/3QH1Py+ogS`.oNmJ)]B1KQ` ~T\_&M FYhqekk"J}FbE"uyef Tv7ROua^è"Ge[ Z!Vb:5fΑk3RFqIU-o I/LwH-BqCԛޖgR[dss{*SSbLkTBq?'Tg OJҢsj3m4CN3 [қ:9 lv޵[6+۶h"nJ4eza#x P^mZ>7 3MbkN qA S9ū'vݗUS)iмEhX)oR@`HG|\ѦTeäFhSuKMW)qD4:%\ɵ&hV4:* IԽhfwZ ͷWKޕn ejtjN$X"ݤھE A. ]V7T)bG#1c՜IuX>ERW ,eA~bNhĞI +@ !Xh.6ͿVmRuTh,2W6Uqs7pR1w,&p]U- 8ӴX$܉=JS" }"\){[' vӼ}*I {ErӁ;ѩuKj" 7kSٹA PEg{LjSgFɂ⃦XYHUs@jfFFfa3G]jX V /{ 󳻢EtMkBbQ$VaԮkkQnW H Р3 Pv{yFH xuaDK]ʔp)M7uDJdęww&2 M* y9S'YrLDt9h.V4hhL;/lzр_&Iz,*^rr.'NB)DPe(oEI`8 Y@kG_$R6S6r!mBVVSjYXXwEКlx ^S̹Zr6Q;J?B Eۼ.di5y3mDjq)G(sRY$?K;mqA RT =G0 &%3P_>K;UtEzE]f "~RMVaYxг if~Ki-NZrJY?LRfr 99^#Eb]S=: f 7Krf%G(2+Ua0^1t{-GҷŜcNRkl1SM>9/g[ >-Zkt,D6ѧ- 3GDƐ?ƫ͠ϼV%ת[zQlnZABcB^4ʶiOn)ǟ-!\}";f!eI]74h#Mb 3q3J ܣkNTW!4rD͞zۤtPiKLͺ0ʯьSTuy#Ee\ctZ򓽷:+?*4[mI-^V9WWcsC;1$ɘTCg,gQ )ST u+,UYjf+nR黩PDRkZ\5RqW|ѮuV>slx&+)m)0H=!nKJO=iK&癤@HAB,K&LӦb+.VrqW!9=cOE UV缅Qa`* 7%*yVnI wʒˣTy$FTd:@A>&~1 B6XX#pܭRPMFBMA"$\\VzW]*&)`jPݐ9brYGȁJR4/Y4[.Ji{XK'Z!:uY >CADi^R@1ˉPX)tޣ/|L RMe ]C a`wqlKӉKՊؕ. J(יeE!6"&0fB ,If᪥Ha%N=nҙ2Kj:tl06vB coX'l`O ۇGOT$K'౰~}~  ~7kG fF*b).洓,9V~m{5gkb{(k8 P8@U^XuNܟBYRREԫGݵ0K$B:u,G'1AUwo&i 6e?4P[ u `Wӹ+?WY+tMV`'i:2g2Ģb| Rjv 3OT/dxSѭOAvCt8վ .}Qb_ci)f!#K\2e Ya_kI(a@,NSu&Gj0)Q͟[uwp2T(pps=Z4Wb[D\]mcB( vm I_Ibo](}MTH3kDgy8X}sƌᎅr= e o1GuW3on>ud^?e"Rf*嘯>of@9Ox~}G1>L5D Mu@Iw! ឌFn8˪V:0iAI͹ef()on{mF6&XliLڡ^pCՌx|j '@ETЏ[҄jU(lMO rfhV/.|ڞ; ^=yh-4mSiVb} lj s{$;S^/lH%Qv$ `'̂=Tz.Ct+浹=ro6;.jǽ}K3 X hYkhqs\L:Zh ^ cԙ`7Uՠ:t 7.6Q,[0sjuH:Ech!벊HBN) S2~ u-]55#M@1ą#x|`n%vR!ƱmfSkGlRHZ긁IE" gAlU%x{Q"rw@*L*躁{u=R\}v,k&&n݄ҷ1Թ_.6XY[~[!l_o_S}VKqqVxqܢN6(ft5@=$Wza*zvhX3ƑpY'%8֝-9 Oϕ8nۺsf~1kꓚ滥O9bh;u Un&`XCmm6׽rt`C66H͞?RX<)PJ5w7ۮ+k&P'V ;IJQ̝"Ibv|e{~ p;C+G8t7*=rAv[Yj{qRv&JZY5> /)+G7:vS𻍆~bI@/*ҥS9׎'k毖tC7z@rUѬ&~kڬQ=SNMvηE^8۞/zAc^S:/AN'B(,kcq) d"8ni6*xo͋ԠNrG7Žcobٸ섗.eԽ5X^ieWTOk ެ[ѼWYɨE ~g>M@ܪɥD|L?/Ayu eUj+ L\A;lHH rYG-:1]EEDgjU!5 '^xJ-zab_~*4]2VRr(+l4taTk!ErWjf>F&'R\8Ԑ ynOT7fPkSƭMLΦ WQf?t͖:4;]`x 8AxU .N]~D+YMRFJLQ¤ᰍ-Ǜj(\!JqO~vzw ^w;\{flS׀2!k}JGT #5}$:"K-/i?YxlyE3t-KK4⫝JE԰˄CEsiwp;"+~"ј6)vĸ0R> M оc]X wd m\;3JڰұVItQA+KJ7RN7k743ڡ1 8oO0K}"N5%8hPGcM*#>- +ر0:0RGtCk#[zJ.郰󩃊(v5 &DJi&&A]=H 䜿},FW?_~X:kJІ5VAӶ j~w~Z'!>-by_pշ\o^;7C0?O_ܼ4l֔Nȯg;\k-AvoK U'Fn1ݘ2* iT/\ᵕvrR-&v v;w8b\t''Rĉ20"xX9Nn縃۠I91r<۝'U4VZ#"k4oǁN-*Jdn&׮b)uhʇÀO4 8ngjfm}hحrͱfQfޣ"{!ݶ^dQWT5|"'AT#ښck*vy#a"-jf_ VBԦ"U Bk`]*b hѺwwt3!:z^KWa|!bEh{h6{gnAWelE$Ծq95!TE4軟V:>"p=`@֊V4p+Y,zTAVZZaj<`_|Lzl)'p[̱FHD;ٗ*W3mWnvn-&WΎfךI:"Y8`9@(!T ;搸]Dx] Y1ҬG7i^6$ q6]wKURU/#1}ʯqaYX9Gmʧv˧lp7?ܾ)`@c&~4S6h۠rwW-y+QT7j0.iɽ_l2/3ԬW WmC0p}ErRnKAwj,mzgF.*[9"*r`[dfchQNr86Փ<|*..jJ`'I53w㐙`6)AMAmO!mZLæ 6:ǫF~=Z BC/}Ǒg1݅hAq9k\?yw듻ϴ}?ů~ً~z7g?ܽxÿ %Û'w޼_>xzޛ Bc~_7?>|ÇozO~f}OާWo><{c~׻/~~/?y?\Of3NR kpiz `<OK7H[}h]F}e{:~+(/6Чs$/Ⱥ|/=\hŴhEx`5|(/K§l_N#}CyA]tv|iޥFi/m" AGx;HOH9+¸h|!3>BTi *6@jތ,m$mL/N{c*ء3ʦsNОsvޤ\!(O Bʚ|S%'z; _u#YLz2M *cfN&I2UDzAs6hϾV4!Edi'e;m+:i׭mFFLAcu"_7Jz(h C[]|R]z^kfmgJ!XFbmF˰ (eH웪aS>8Q9˖7d&< ҄ͱS0D`2#VMIz˴;[.@s]5XN˴Տ4avF z  maTqhitT> 8 z4Ŕ4HA`mZL6FNsA3 TPY*ԢGE:p@T>oM'&l&:BL]VZ:Dwțt(D-] ֧./-(qv \*)Y(;E(wEv^)5 d@5ɗnk1KB}>z4i)n2ML)kG|2zkqZ<2BcPSYڏ6HđA9Ynos<8JvMvSAyQepnkTp1<[EǶhFugeA۪U#)?4H[_pnԭ4iSeB>¢YpD*4)lo fQ]7)=V1- `$?mLԙHgjI&یctᝁ]:<=m X_E+)>{yD[Cp8:SRSbt2rPX f>Zpǀ.tR2}^pdE7No=N@4Ve7?ddBPbI-fZӫD13D"O*\lb mq56aȥ6%44 q 0%) ; ~>0eF21C8Ժm|ۢVyd5~24{as _.x}i͓n>) ViL@ڍ%2;DZ >Py4L-]c]Fa:43r V̋(zO.OܓXʑhwq?|"4 Gh-|1߿{ %}ۇC'}@vPPZ( S0&CzxmAw8 G]&P ؊ :ua xd*/@+Vb<ȎCK4{|.ƈp}1ILժq-|%oe"S{VsS\Fc\+DQiמk1ŨfX-)S,!k#-6. >+i?^DoWxԢ1[XĂo ̎ۧ%)0g]<^Ճ jݙ\#0w7l;$>Nj5hZ-x^lw "=^T.x;F@Ch邗]^:",qȞD76%8Yۊvha[YY{aP4Mؾ&b),n X;]!9>\C#Rm{sYZ xW($1\) x 5y97X\`8pcnCp$\&&/lZsb36˛7pu~o&9n)ZMpia# ?JyplASXWXBUp662..&8/wC zz'㚉 y𤏢h(";Iӿ;Wz!]f:D@06 2FV~K": ar:2"3csnu8B{0lTe B[Y\oV;A*) ֳ۱w˗#$mu-Bq,N+!Q̒h] a:,/EJ-TKv/-Ȁ1-.u3s!5YFR[ b[{XFԄH8qbnߜұP枟|`>1Fc8 *8~\w{̮kjOQd) |`%f4̮Ma}DtC.z%N7|Wܘ3W+8'Ƶ}}rd?oE%Fe7*&\hMgީrXTz,a4_8ׂF.].mElsD&M7''-"(Aa%]P@q*yTatP61~&2 g]"]Jb*1jue( rRԂ]OcW8p0Î$ n  ,TJ^BǎuBU`%h7 r򐼺11=?^NWU >rr̓<fcDDۆ, &FWHk'гɌn2d6ӈvjt<v4D.r;|=fd^@ GvגGR@DR2)U\ps"&ܢ'+zfFPR 0rAfTC#YNE|O_-A29ri3jz-gyj-= s^qHa8'2 RY &K]АWd]V;a@U1},_\_ 6$$I5X3~8;E6ujk{#;RuwO'[XӵtuwgKaZQ< :pmMW0pyN6)W6ٶs"͜G$81n^Y^0g-KNM?) E["0VX.U5_:VZ ̢)q3U,6YtWB CJ8GǬqm*:L5.0G!G#0w5+9谇/+C\G6O\?C*[A 8槈7AbѫiI=V\4p=[RÉ~Y}a2þy^#Ijl!U\SJ2 Z~ՇO -s. *%)%_rD ܧ!O Q$5h0;FpO.OW{^ήʞ>YA@~}CA~ #M@u+<6ja5nn$oJTY,HO(=f;r%1GX**m1 `9hX '@ ˈ y8BxF$'EF tMDZߗa'2{X 2;PU -yY$ !NjL.lm.$vnrj& 6Q$XRˬKxp0D-TxcWNhb"O‚ bfs=^j-Gb42G$j-直kN2Kg~VG9ԖfpUO$@m]<[',rf2IO1GsLwO*$mp ,$FpMaͮ!eCCG“Cn&+S"@Z T Z2֓j%q{z7ywf(7CYB8fOTb5e< e, Q@): e& ѻɴ#De[^9ɥ%)|P Z -qʱ B6`E^o H27{_K5, &?}b2o.h]S-pnY_YCڐ-V(( ZrnR ]kqQ[@Mr 54Ì-7tC,*I8?*YlU7B2Ȧhg\Yv6Lъsx@ٕ5o.F1h+GWŢ^6%YImYч\JaҜK܂pݬ 1ǕW 4ǤBՋT UxyV-vS\#HT_U,&:']1rgiu[ DN؃F-+rץ> ̔wԁHzU xۈ un"&{~GðfYMhSwˡfor?[*̪I*LTzhf/kY9,xsu'i Y\~-5Ջ-D~XHV;-HX|{ )/y7s ;mJʰ{L E_m$e$)\׬Ḙ7I9,2%IP9@EAMtjiv~mkjI;D3<+:)B&q13o' 5MڗX*؍UIz S I mB(U&]G!vƬ8$79MNِķVR?79ez+$=dЁ 3`2RsQZ"4$%qH=K&^qm^PsYw \ܪ!=V8O.%xʍJM+w3(>݄LA"hx:V!BHg853Ba8' z MoT=/Ǔ筮~f0)*pR  kkG0.Ύ2 6-2[88Bzz}|v{`NMu$n&vISfh6NhnfvNɴ=8kF6z6vdeJ["7} jMb~ґkYQ=T 5VnNҤ77r}3nh2~񜯵oOc0)pe)KsH %zq摭u-5&k>l!`V-~ ={d/)*kv#ǽm6ݨ$XBfCU#hܖĚ,6ww7q( dnrF]w-! 0 f}0J#q޹}t ek&%iarfMkb]u'qf˝'uTV]qEns*f2Y4>?Ik\n~92pIt){ۖgs9n*8;oRjyzaGc EA3uY3bChm5# [f0vӘlx< "zjL<9*rƾ4 _ۭ:ӿ,ynRbJ{ @ A?+2}PFU>?}P*?9kj?ϧ,m߬ 39l!k$ ;a 9DUZ U9jPs~\kP&Sౘ^'iu<,IԏK姠5|2gxR9̝]tYG[LaVhfv5PAUfnHJʄ''wO@Dܲ\۔Q7:4ƑO韞 tu`' 0~"3GtP%W@\7j yբV}E 7QYCA} J6棪ͩ'0y-HjCR^~vPiRL~*0B nzlRnNw+65c=1 uyRQcn970++ RzXId#ضZRPiFZږ{,k{d>I:fGp1E)(;g핎t%kcH`l2`xuP9WURffd=dS<X˷VaSg j. GKKK19Ugu8ylnC^iO|d?xcH̒Fa]{0nt=g{Ƥs Oj{.fJ GE|ITbj/Sr t6^v:YsGRFi؞Ổm3m}գ eg_}W明O`ҞKƺxK~iA !d?Bi L`=+wCic\d>ifdjULރC0fi%e8,6U~H:`3:TX\3VsMˮ.A0r{AY)yM5$<ɳ=Mu?d5ں0۔>O@P7(-"{A|K6't8j㪪 wuqw+f5R7iTΗcsJ*T+4Iia):i6.fir/t0Ju+'|ڴn>WRN˓!9o'|޼}_|TǓuT3?+)S'I P8Ox^SJ!Hp>Z8Cu .t_ai[+}G9fܥ#f-N:ŦDݕa6t49Ҥ'>V||*$zlq4=U\mjX0iov ir'd +݅H*Is8ǜ$bYDIhaoK4ys>%=ևq>7Ը`yVK!Oyo)ƞ#,lo[cY(qp0ѭ?օ<",G~9+h  1e)$>ՀGBG/)Uc``,P.4 SuL%=KZ}y"YzS~gc͉8%-%YSQP(3s4(39.bu&Z59^ w٦\v^`f1$mc#-fw-6@7VdzKK2YD5<,蓧u+q[#w׬@yVqr4 K*&òzTN Y a21}S O`@9dfyZXq)ԲYnjyl]4r6ԷXr?nn^L@܄-wmcn4۫ҕ0PG I1z(\~-FӶm3tsMұh\$.BI3L9>N.0)q6B+ p,q ֎->@YUn5K_~6Tl>IZ:sԬhq ~A?ۻW|xb_~KBAhU~7Ahӯ߽5}=ۧ*O>g&շ_|gw_ۗ?|ͳ?=3?7k s&D=ӯ5g `cO'}KLDSQ(QsQ^ɮPgȺ|19gZh bGab\o]qц%r!?ZnUtYA]\"k3ikՁOPQSbbݯ`5LVY`b=J׺dLk#P%OFaJ3] Ȉ f]Y`6VY oa9ZUnV"ƘkD4̚d-C r -B,vSJ @I 1mSEwNE*B`-e!h3E5PtJRᚦ vt dR@OKY=3t#Qd)@A!ceSLjф|^eyXr<;cİo;_ZkUxufY9̮0 x-"=}U'RԅzFgW h6vSk!2QE#SDկgh<^"AS)Áh܄EGb* SǙEͺ &6zrFZ#iQWu DkګBw"k͞wL{Q,Juq$uLgLo]Zn5zLg^b!H?+`ĐK`ՠKU=p2;5 ecf 0+L87dmӗPu=Ϣ {C3e0u!X~l:gI7DŒ Neع^WWFʖ벋z" <,f8ʹ:x7"IIOUbHw?*^V~u;Uq!Z\2j^^q^Oҽw"ڵv4zhy#]@K4VI<ܮjK +0/HJj]6Lզ R 9k " s7ƈhb=Sg}iK/;Ŗb[o#=&k2RXA\d0to"_ UյtnBP_I9SrƃA )Us  4u ȪV Bq=v(E1kjR I\O6PҿzeV[zlzR=AhK4]dR4hE" m"̴bozͪkN;zz w-\Ӳ-ȗ&8u0\oz v).-[`-([UUR%b[MpRWchD>-wwvVmݖ8ydŔ{BC+}ms7gŸB&#Kl#v>2xm3Bt${? $Um-Et$=t9|*F>_H7:fwQew|念Q qG'a&G59J ?fiHW~Ah^Lf&Q~z񵊯͘^8×T&BtBxwT.."<gu.S\S_ _e %9|aI,dl|6Aa :>î_v(,;,{;P&7pZ?9<9{*ُ?>9{Lp>nZ连yyç뻻_/o/o͋wg/>R//*l~rb~{{as$ph󔢇Rq0MwY3]S$,Ū4"+COis\jy^Yxb܉fxz@SN- ӏd s:x)]I$ ܉BQ{7 N.\Cʖk@S^owq[NT=/.І +J:ǽiiTZ8f MY8yZ%|+QzC|آr%YZKs5cvACe}O>{e3s'W0K-{NFu ˿5 \F0yÿe( =}ӮgL{Ra9 ?|zjY yEB᳂ܹY$)}fRndߍJˌgOy}ܾ_G5Q\o=MQ_~@~-_YZyh{Zs99rCp+FHxޔ9*sq^M>M-H =eœa􄟙UrE\[ؠlA 5Tj,= U"˶&_ 0HGUJh6\k Dz[ɹC֬Jy^-*Zoi͂IlRvr55l8VTDfs`RZ zC4lgZEdoO"#B?Q\HD_Ho3VQ @1s{4N&A‹T VJmVc`kޮ݈H= TaIx9x`+OYӉRZvD%= =R%2''؀Lr6PReHP[]vժ52ܵy+fBýG* (Fz\m|}K~dd}A&D0"BLiqWO-nS:Doj+ YͱA.S~#1o9 j*fv3k&}G`2-/=}ښ*&@T648.<պ6k { D&_9ֈ-], Q4ۇԛUbX~ӅStNMn\~?Qx-%&Pp{eQY]j|E&Y%᳜4#QQOXan/?]r}|շ;h"V>>r;mOwR$7/^{qWo.^/gp,%쏃`#?LgKє޾| -VՀ]suQsۼ! &M7H":+331WIudl ȑz*j՞@0HP[գzT㛌Bx:+ӊ S81X8~$T޺ȞQhYs @&ɞ[*Z_r설{vl OlqӦWmwbJACM:jĒ/dv~kY c py`~vv/ A( h,=DWnXr`u@g poZ.QY~VxsX} '^n;b=:߳j6T!Etvn9ai׿fMp;;닐hTMjd;"$0S ;Tvb2?aUj TQ~YNÉ5I:sfm+gYaYȦA<kjS .bM&Dog]׆Qu;&&2z9ߌR|&8ʳX+5SꆫB;d iZo/̭vEtF͛l(F=.iZƪ詘/*aLC:ey׋=.3zJD2[vnb-c<T#?OEPIہV{8ViOSuWqkjyn]Ji_nuڭ<`c*q^wV^ F#tq/b!nwqX`kz 4dgR}9eMkZAO kנ\,Hi9b'nX)VBS8:Q_s0F̝*nMW*&dW+^vA:nqx8`bM+i< JYS+ގStM'f,"J(^}gV[ ]^s# k!\خ7q0 ˰N,7Ez-q#Z $=ukA49md=S?>j5mrø^+Jۚ[iE')J&!V<9ˆQMdL`HHO3D.ȋ9iIX[mr(.唵5r^R`=3VDXz)BA0<ʼn&+FgґvjL,yគ!>%Y%'B(xmUPq볻iQ1秚sy חE"`֭;qT62|bH\ &9R?6)|UJ]gkZ#P#.yA 8r' xH fMَ)"sBkO) St4+>~eц'|6ySFO#4Gd!RQʰEؙ E.<.Q߮J3Sa]IXbh SfBe(>>. OtZKLMFrADZa` x#"+,Z(H;Gtb88wŜǣeI+ƙ !__Hx4UG$1pZ;dcWxаbTm,rpLC eV 0K"%$ ߿چ09 ,)L3(P CUQ0 hϨTrت(hKx rsxc)s:cP+,@$َ#5YXru; IKzEp8"(K\v1ĄIO!@02R1WaTFO]̬hߎ5JQh{N< ^]/KuTvuX ?IL-0/Ń-^k s?w0'c2` Z7DE2'QnJ\Yd?ZV 3 dCӸw1Կʤ9Ҽ+3ڼQ.d)bV牜>KSRJ*K*ea%ϒ.=eI4CffQRǼAϬ",9+I 3Sem VbžS?,2Ay#L:`I;\pfXl;8fxE܄"råd*79OcZ*-xYpa95TYӎu`sn3U|2sS h1^!#˵KC"E}j(-@W$ ( +x$y!G(%#h~xCsEōt;'߸#.kfyP*!HX^iJ(}Lj1+|2QJ h Zg-H}? Y݀E 3x]:806v| Ri@ńrA#bDjR L58Cc%dS 7s$x9*v8W1-<~@*v V6*̴@rwe̴wY]Ӂ>nǫԻlkId=ёz(a31pա H3Mynu2ѻ&ب`T=CTГ%;+_b‚Fn?eƮ+Y 9AO`Ji#b?_~_0V5*nWOU!i3|vwŋcՇ.>]_>ݗ[RWOǏzY!&+ph B́oD'ag:b8x6r %CPr]Q*Ճp$c)6dJsgVrIx Va9YRO@3@!%YٙL d+j)Xjar0/c$ ^pRafS/k%}3vT:S#(;<ϰXpկYf%1dӴ0Gpۜ,8{;/`vfe'RlD0`ٳr-Zpڭ 3f"_(h"m/YL 7Q p+{/P JпeIA$ԛok7?[TWyJxwSؔ>_#>C0NJ`Qb+,dHhQ9?E̞Zy.V'ӿ*cCJBă`Lvs38Z!T@{!6"؄=C2ȢzAPNLaSnxM2>w΂viD#וZM,7@A ;'׺%جdN U 5sBm۫x^4.ipr>o4JǀsZyK~ 描:nOo?/owkNf3]?.z\ %ɂx9CDy.Y23d0wi{ox)CkCsu8 㢲C_[^/GEKjtD\fZ8 i9i{Y*El/oWϝͣĕ]Sh+08Aj6gTzozM]Sz0F۬ǭp^jԆp LјV!RQt6DZ?FɁz-;r@=ȹʶ6"6C'0{u5 vE'ŊT[M<ںB-0>h T6(Ѕ PtjY5eI1;l\lJJVaQ"=RKiTٖ/t^7ZU3Ħ?U'upS!탘߼{)yH4F"c$j4FR>EBC,/}[oDZ~J3PFq8:ɣ-1D&7wWWOO cS9wk qsw~||}w7۷/?p{G\>;ywWNo~l-e[wo^}w?>~~5||~z͏7޽Ά/^=w?~?tӿ=?| ^o^x7^9_/端|W9 __?ߟ՟YEyYY_V?+}VᚳZb2\,r9ۓu_9[v=Kqk:|a|;pzҰ^ sHӶ pGw~UD k(UJi+(;caF`jӰ>ޥNDn om(# / s8y8~)wdbiN! 49=Xl.=C.X~"[W]w 7@A'@ ya{Ef 2܂Xnf [yZPz& _/`A˜3U# euD䂃'ZzJ PKx\˲*"Edg*c)Mqw>0HvXX]cqjlJ"qT+mP2f8:XFkI]R$AGe,A4tvص@0ZI\<@op:`ۻ] oQ1AZFJD5K"" AWv8 O2,Yp@(X'|N. ]pϺVsw-վl 2L֢whLB,R *Hd[Y.8YRSt5_]x.pTa6&8axDKkKa,$r46R>Jp.,D#<,⮆Eԝ jR~R0)$/eF@>Q=q2)(GMjSȅ 2 \OFx=Ɏ%/L44ܚUBõz 0:>d1Y)z\HYƃb.Ajt!b8N/3D'tyUw ΊV L-KvӁE$Z)ڀ+bsAiϫ(ٹ[ -Ay[ )=EH9Yv͏7i@ 0fQBg:3EdU0b{b/PnvTITIH-u:ոh;e{%g4lO 0hEe&ϒ˲1liꫳ8zË́\% zH9t(Kg`1h gOlh4Hqv lwOKmT mm&>a.2o'SQپW*/&hXɒ51Fk;Ak#H}I_%ptߣfAѭZ* HldNvZtt{ԧ+H)EYf: xԁdk_-IL5 Չ ڍ+~ڬ\,me} ^[NwY$oIkAThxYD#:N* a4"s$;DAoiO24~41EX.U=z5H u`ְ %UY(|rX~Nֶ&4'q0ߞM"=&Hݒt%G@DUYU;dBS0O]hu&x+D"{,gЭLb;rf5Uu*Ē\ !}ǽƯק" C 5OΧ-@*Sm{_ |y qRyZϟ^yp{sw_ןo|՛W?B:9ZoU:wo?_['ϽXʿ>W7W0h{#'O_>`#YBDz3R e%Fvh=Tx Vn܊az7FB4<2R_`ɸ,MA$hdiIhL_=c:ehyڼ9ً2|p"'誖 ],Z dM49Fl Qhc8Au/ KcD)ʵ\D묻.DCJuu=9Q0@] u] ]K4AZ}4}MDd#+|{Q,# ɌC'J үA@$/._$ADaDZEu'`.7!d%yeqdHcZP.ŰRL蘾%獨5N@O7cdZM% >Rﵞp NxhΕ8&] ^a|Ӆ ]" ދ!z1EKm2PY EHLEЮ!Euۊ3QJyʥK3_ǖ^3thp*/nweCtOjKnB HهXs<&>+z%7"/uI0&6fQLn%?BZ }+'_q1{ Slb,T[4K@o`;v-E# es {z6CrPv/xÚX]!!Y%s虡1Dr@:L,1UCt18"T>VhƠCPNK'+v]$ %`u4K(pHf'BZe2VgҩVkdx1he ]#2**V 3e&t&ttG t*sL4[m꠆&' qw>Ovz;7MDC3 _8UFjs#giS%#<ydc= (4fzE6Un >ыXjqc]ݥ޲ 9UviP$XG@)gLu͔-\%Q:szR 5uD+44ć[QP{}\A޴m,bK^.{aUI̼n-m*X+B+~SWnmũ3Vh1uPY!?#!wbӕУ Z4Ddd~} 9g3WEqى&`dHhV1q&Z⥽j\M\A:_=4~)LVu1:)>MLg AbRHRH`Rr2#f6F (h`^@G\,: ] |2kRؤ`j&k,A)pZȧBq_G`~o?<\~>t]x|=ׇn01X# (LVol<^q.`8'Vl5Y+zcr7t]qX϶y\Ԣ;{N'6B60ZovoR2O桶mt5jfFg)KN%'Q ֓L{`5,Ks)P'hF֪:Slv-fv3\ aІM0vȖ .Eqq0[5b9/9QoG#Ӿ{Erɛ$gɋ~bWGY(r bc $NBۧjFj!Z/gqZth6p֎ZYɚ.FO;H6 ,ß<JGAʘ/m/'PZlmaX/76eA&}dLM^ngpnFXk40\۵# N'{ri9M4[33G֖?|v|I3"dDsf<ϑ=?rȓm43#{2p:@EZ?)(kb/Q.1ⲻk#oEgylH4dIҐgV Vc̍va5k;d5rKnd{ն}if)DkL2ZuYy~Ĵp.h,AiN\gR%X3Qь$Jqgm/bGЉhIB3%cZ1X+ F)ګQF%v1h*-qA\)~ )[-!]0$lG,ݱUn5XofHMm#~ W xnyc50<w7?p{gلk~xgp_miTr}iIWg&[yiZ(=wm-vҥv5o!굝z<2OZLRSsMNIlEG%r8mvrZP)Q.98;S]Q62SϢi!3HÏYf[oZAsɹ${ܴ͑3:*j}~]2(dYi*h6C qkř9l[AMf20c\#v=|/N٩d􄬖gB:N!Ca6HA19Mti#Q #{7vM0ǐyG>MUfnz7kL>EQsI|*v;Zs]0lj 3/Ojr9gqNpI3 /9zxj^(6D7đfͺY0*lm NM-ab= cy6ņf`!vڬl\?fkzߔ{6p̝k/jL42[͍(\DbeU}L~6CoΣ%>ć-9Xc\1Ju$.(ulv yuϼE'us&7i[ "#(Y wC }xed*]w^ZAWPiE';҈RI9X=-=2( jFIRdA Sɗ[Hv_Js+C{:nk^7֛0Ѕ΂1ѣNuz'2+%2ݦk ] NSE)laJeZԣjܥJd礈g'a;zy^퀭L=@DG1*7,vU nPX`3#B -E8EiSvY?;4\c\+ ($V80"̣lG(Nl{gS 6G@+nPp/bF~ȇx㎈r#dv&Y1!5֑ #KՋ&;ss(Ra ivrv`J rOnx2_i:ND ~GM$Qfڨ Y;ۗGOD 0zEaXKCGFl "m^.gWoC|Fnrzu~]UBޮ~e F'<ּ.!o2o@o7_كM* {Y-FQ}h GWVZ;쨚t'0fI>Ž)hcR'*88Ki,E*d'Y$Mk{ 31k/9Wf큣 T{Nj{p -nhj™r^[CN(8^7XM0X@kñѐd aYV9ҥ9}AGMqUIqc,J4Fh &E 9A5џ%^?W3)]a-F}H:&LG9TEUȖ }I~5w?AA)[ Zt$:蹶r߄_<ҫj}Cn~~x_|k=>ݾ cowgalZ|q ]PD,[V HkW!Νh5&q}:Jb Ί\,=Jͥ6)ɞQ1&3#Aka҆Bf0)|Sbnc 3qѤa.;X=@a*x\RV 2 ͎Yq)vLC 8E:hήo2Gٳet2B82ӉJRD+O>6nfa~M1_ŋ j fxY!)Mv8r-!ڔ*UrՂ{ʤGL8;Pei`$s2"fy$tI1KCTlB6yP`J&D9lpL dÊzm|r鹙Rgus&3/KFlH@SJ=Ǹ$n1O7MplC8B5; HhNR2VGk=ybRk|DZyA:Þ acWytsVKO=quN萜!os$r HHX4W^ ]Jk,)$^, j)+W^)I'j'nXvUb{u~+TMg vaY/<%^OhY`2{"|Fm귦=Y`~qy=>:-?)1#}yC(.NܒH@ltv rAzFuz'XQNoc/#$,{bKe/ v^K1^߄_~tswpsǏ"׿[&`y}UXʾbN#+NP%ptjsf㹊s5} AI 1kܘgt8yhwF!hpH 7Vۓ2SeIs'Ԃ< riis DJwǯ9h*"4X5/I$T02cI #' AZ#A73C92 %*Gs,;븖sXlmYdPJîaK5˻zD5КP[W9,vd/TbMU-eSF]iv=8׺U%‡-qlߺp,6m ȣhΜgok_ù1 Ʊ&E1^+:ɛIaczn.HSc٬ 1+̎ma f ȃ!=O,f][e|Ä-DKEj0jmQ .m4 .,IHhIP&:V蠸Aܖͥ̌Ø%_ nD4܀ny. z3;&t~,+Gcb禃T#pR(M,G?BCp-}ksgp)JenDZuY\kJ-oǟA40@O"Ķ^ _XSTRL>F^jq)K>\ c{ Z/K^/_X܅u\^]w|!?^H4|c{ WåZo r}+eVKz_|P֘z_{|a¯_\º%.Ai՛nl~R+7C]Sa] N5o`"JJ5?^ܿy杕Vy?s[LJ7w>>.߾|O?>ȫ_<}z]_=׋RK/O~xzzz|׿~xoOO[wޯ߹H;yú17o~7߆ÿzÿ/_?|rۏ_xgW/_o/YvoW_Ϸ?\쥵r J["}J`QȒn1#C`}h%$*W >/ m\7#r>XEx jeC 2nFFZ$Ms5%x̪%UmܦT m+f)փ) DAPV!Z5KЗ&OK|#UEP5>9iB"d^@)*R^D҇G›%b)䁕,,0}V&ʹ:"1t2T|%i`4qj(ŀX*yAeGJJ@>ԃ..M7r,Ps)c):0׬@ `7S[a ^),x-,<䷍\ j|<}hdQRrQl'a[.Te6\ҟ Zܮ#`<F`Ax>a5P..X`obټ*d==_PhK"O8p/p4hH#(2RF `Pϱ.WUhtM7*mg(Pe1TnL ɵ2R fv2[$T-c+,dN ͤ pRC} 5>ZѮn湶6FZqBHVLH0mʦF&J 0n28ස'x,@l֠$N/0vY}8m܌MQ<ցv1Ṇ+mۥ641!*ŠC*G<&o8P;U{{37+=z) !Xf;ĩ\31Mqϻh9ND؁WpV%ؒbyrBaȠѢyKvg8B ּHxd]_, iO:&`|\<fiZ8:WS7e䃂CS%L/jW7FJMG`Y6a,3ʍK%y bt?٘"7;(s$tMn{%MLmUjnn//,$MRMr*r/Ho_sϕӟ$ {O%}Ǜ|9 ۏXE=ƕu +I@/ \M/@-JನSAGG/+լW=c [#j3^۶u s(`-ΕDok!]*Qbp{eDfO.&_KuЮxK1.Ll2y{L/^ R$uN) S>M~I#}m8 dZ>벦pԭp?6rNǶB$X(2ڷUf9Zl.+#lds.(Fcr vmd)v~\c\%Me.%$FF= <;)NZ݅!1^l5AN^ U3pW3Ӕ_K@=ŰTe~@ZYUv7K(0ikhN-wS]Mh=2D(-nsq $f`)w!іq4k>ۣ \{foxfE^)Wf%P,./c)lf×"l-(78pjNmcf 3*dd'b6+Y6bQ\*`\ JcR0vJ}J}!f/-,&EM6?P{V סm?')gSfؖ%abK+׭wfKX;49mP (HyffH(1 #RQ2g *0P#FmiZpPb4T l0L❉ޒ\ۇ17Z1jgZŝ$zۭ {|'vEW|(RVð+A]5&푭|+FN+r MeFbKEE9ԸnP)Ҧm.?7 S*Y*ԭl"i"6QfF2էr\1Ȣr1~Ve[Q5dnbv9د>E6nTH܇g-PvEvgmrR}.*GMs/+ROa1LEZ!rrAl \#(е<㇛[I!",AuKU}LojRB#T~f}3_qb{w bФ!EӒ2(EN+SWM_v UiD}T (*ڄPŭycX+"݇?<{)L6t!򧷷~1$s>z8W9W9 wsܼ5{{w{߻w+f0y47oN ByRjβN6Л*X2Je ^r+p57%s>(F{d8gqTӎdG!h5Jc4Md]C% .8TEba\m F FDדvv' JP$Tna dj9cv5\YƷ+(yaPr@nRyJh؟ ;X+Ci&G,Qe8%4ʱz{ˆXd,e$dv(cQwjtE,^@JPN1:+fiY4wNTJS=(ɏ0 JmZCۤѐ`B2417. [qd3=~puo(&D2"桷mASBldTsП54,<aܺJO$S98-%^cP5 K%\\Iĩ觐/?gA=}g[o'o)Pttm^(tAR_蜅g}PC,Z+BU{  &:9B!܋QΎĴ;ZxϜSNG*qI(:NʙGb,wQE+l7逞uqu3!Jh+/ Q ֋,#Z괎ZjX-sPL,P*Fٲ34;Q2؁,o!p[PJRhz uQJΚC:X B4eύq89Z&s?&*MGJ <5,/si1OBx?gҤQTjXK3\L?+6hA5`~*KQ1İ $ol@l턬ÒbcpzH(`r)rnYPY3d㳯P]̽|{I}1'/ϐ~̳ e3 n_1x m 18k(DMIVUME0 uݨk`cu^SrwÂܥ=6&pG ?_݋(yv'-H4]8"Pn"x;'<wGmy9gm@K(:FF|8`42_]/h *976ѶCA0$ȭ\(rԘ8y ~+<z&xR-JWUu/O |Qe"9aB'|ZkTCj y7jP2!4 P#'c]h,oWk`!hFyj6XP+̨>Q?/,FB-++Føs?+0@1zTÏLH#h7ro7ھ45@!Ul Tq"pd =hAW̚߀fԜ D = ϊi3ǿ]AtdDNc6Dd"1X9u/bڤRsYC۳LVBVh P/kD f4Ը!Tr=cT +G/6>p[m6ϕSFp)uhBqwL s8Es2bޙ1 TRZܭD8*91ֹk#X^?nVډ&9PN#sj#]'nBy^r`յu?K)~ul'6&'v- 2n_6hw#Hf\fT>@.]~w4LB> :YdcƮؼ r""S+ K,ti+=b BX~x!K_P PlݸQK` V:11.R  A^? $Zo=#7_yv<Ͽبqt9k"p&  _А{#EY9K0[ :Nn/sU`p@A- J8Pwio\kb; vN g~߰y0bboB2Uv)谸i>#{Kl巨7E3 (+ _L`revf9Lke"`PծiqW*?Q\NeXiX0+!)X' Mj9^R+x7" ^&):K5Va2&@PRǜyl#4  ,!Sd)MAevk8b7WгLB~{Mxa4jn{HEi~@%Q &BTh1T !Ń5x<<'F(mL%al9Sٸg-^SS(NJeWi8uɢG~ss0Qo0fB`F#芾@MYvf0^IR*$HQ{=%9#i ,9R(@k)&wrQȓ \R(F w0w8L6 P6jNԟ& 3 չMMר $fӈ,(hU<ߐFO+U깵"*N~4GT& fIqF\r̩C=b>vܡ;xbVlK #PݴG@d+ ̬%#5sVMMF ҕ_xK 2MZ``ה?{~A^fk 11:Pru$'$jOC/5,PfT&fd+R :r? 5im0ACʣdԥ;Bk%rqP.Fߏ-OItddP -]f>_x@At &s ‡ - DMgA3c]1_%RJ9RhHZ_CۧKd13><'zqtw0~Ԋ}Г~J8DՒ=p+l!)oO(y0Wlⳗ!/TpJ &zg.uF&nNW72I,$pZ7uK*a r-}ؗ9Բx^c.9hӈ1ح4Yj%qcaSm:WKJ!r.NUԞ2S LUs2Ҝ]NTl џnZx}˅[XAq^H7r4TbI@DG,o}}10۾ qm, _(@(*B!vsOB)Ă]Qb 68f(?@d|& zs}bǬO (Bc E`6ǩ4S@gJqyhl̓` ,8克X,us3R"f bے'>gkFnpzE-eIXsYRip&yppLP,[ޱ? v\hRȑu8oskt+X`3 Yo15˭R;=Ju(E MǠMу!cLRmsDI&9Toy*Eͬ(wq^ i[ sвa p)*E 9JSv ȭ2 'UP:)qӠа` aPa(8z.2 <1~3]$ZOI؇BJy*] ĈJT!O1PXfs-(EȦzɱv4XF Avà<5{svdC99*f- Ș 3>ejzQR/UMh}m{cID9E]?RZj*?KAŬyZ֢R,? {?Ys۟~{sqt{4^Q/ZU\m}صF_}y41{;у#X ԗ;l`MxDp}ѡ& U3`mӍϩ0&WGn$Rzpr4RM4n*Aiqח~2U+ں&zΫSj L-zڮb)3 ULFf6XD>gH5EiYCOG#)[KxیE!T}tOBcSqjɳb1@;s-?k˖TKyU03^ V~e[ o)U,_NjJ3Jץ܀:H(9|<"f%7RJSEAͩ1^ `JG<0K\UAEj$(%j]i=jy"x,[dXVMލ950۠ JN PRQmcʶnڒ=lO{~ڝm u==Ih$45ש^zv};]kvzAo.LP.ڨ; !1keVB;1J[S,Pj+ĕDMgwes(x~AHs PUvaj݇:P̮pxN"+'.S^BZQB7UjPb Y@=unL1w, YLFe!7-s:ϲ1l:۷-wq#/_ uZ3Q=f=\v wZ*ˀLbEYFbN\45zQTgj9\6.d9|)\?, D_#u{Zw|T<+3a`f2վF %E4=-i>0{_hms'9HNq2o.{ked_B;BKbr"Z7V璌0܎ol6h u ;3u7`_Hh%H?kCe"Cs\Ij`fK4bcunDi]QithSݹ`'lV@5B<+@+#@?.:eMtΚ2kbڬI0 ~V&_=һasϏ p @kQ!hu" RG.#eP:Sr{$6{MEU.v>G1q? l8B7lh6RQ>f84_h R{f~54];7@F^,119ʲ4AopU8j"ro?h>u6wu}}-;a5ؐ܄H`nG>KI,{YJAȶ }d1:NJc+p~thJ2֢;@1?7.,gv6)a&?itqRZ D1a0\r ?sӼgfH_F_m`P"N 1:7 pc\4JS&R?v VSH0"Gͻm`  j:S#ѰQgKn=.! <,?jLU9YLaN'L@4BwbAw R8.*&(a TAϟ01o7MG?MGX `{hƥImc;T7x?L7AQzԣQkS:6^eI4ݜLQS-1ZBL ^(vPJc_luC`rA*~#ìZ+Oe)V=1gi00^Y v[CO%=6+bh >>jsp/so!;x֣-ĒVl Pdh#K]ܮ1<@ԈE PL(s7S~ɲ!H)W(ˢ%Yur ?߽~9f J,Kʳ,_>|x r.J|WTDz__ThI͘%((ch `L5Ti2̈jXJoP], ,˝K-! `t<kdH2?I 00ꮺA-/Q҆@lgX 9sPڭV ĕ !6iRr3,BE&`#qo9m D+86XWʹEEi5  bؐ"{AXKp8k>eTZZt Aihw AdCÇg}+'\q@7@3"zeBC-}Y3}jvrĘhEXeG5&2fFanTp=`IrzǥkL=:}Zǔ`O/0opnG ׻u>B%M: yDhф^*aDZ7,ޠ.Y7|]$/z}ty h<|h:;ںXmܐ?Wkxjn!nWO>76W$,pc͋ӥĺD:}F ސ!~N2 |hKԶ@^q(X%9xI&|]Q}m,K+A98wq4Ye-)Hoh7"ur8!)7,|[ fj2=:eazz"TlHNT8gzjSyӋ),Ъ|2>ghIEM@֮7]VیUL,~&%CyAkܙd x;EkԘ7iYL,r5PٍF>y&n< $$8u$ڳZ<鼗 _bLjy\!783LS H+FR=|skHw/NQF4{ /t{~0Db)!#ݩ:2 qqdZ K)oHv,SEO^oXiDU7HTnPu}sNO~3H|05 GS-@$@C< [wj~pd J1NxD!s9 JR!iŸ@NZ<hÇlpn2Wy퓘97OO^>yxrK,Ku_Wn?~z~swou0ݛw7_?tsclJė~pu3m,Y_>?>>>>槟nn>޾yv ݇<]}x}s7w}={o~ϛOx~O= ~ۇ<'/_W?/~|}?~:_N)WPځcЬY8š\]3*|g4p<~ϔdzr G̓k:){غcϦ_U1m.}QK!F>vc&! ^T>GV0hտAq)e$HBwѷ6{iݓZE2Jrbmt9of}XGT}"dyTq;'TqTe<=G?2 u%$'KŸ-˘$8Jf (nL+MbRbD 96WddxDߠ,~V{'.# 名NTUqBZDs*v: B- $ ?b]gaX٣m=m19ҏAiVD:Fdr ,)cRhwda'l/~,J,BolۆJ}~* $!u[1΄"$lnr#B*I⊲!]V؊Bڈ2iup{+ JA8"s8qEW,J$(b;VXSHDD@~ a( RϠΩv!&]F%B,X\)Hz2{1=e&Ltxʐc\r[w vz;г ύ%0`M²hG-U Rl 8Djv1~.P3-$l%C2f")И'ˀ6N є!¯5 ]nc8ER! z9zEdi%D$s|*) â'?L2 !)RzC=y6a0%듄B-kVJY7,/$iLTޅ/syj/̆:F ;@]uݾ-n8Ɛʰb6jO?yف fJ]u3||s}{(ǫW/<_!ԬTj-_>~<|w?|#|LoO!D_΃}}} xɿ@ΰ0?7ݧχw75?xs{ψ:м< m]Oi PV  xP0HM!YO1E S<i&rrYc2r9RFSVS2|NlOgOS^m#ZƐG'*<@y $_ v-],Gz0G[ܲ^>ͧõā2Of完4i)г[]nS49VC6V)t-ۃ! /p{(Ȟ[A+Kۺ4M(QFiu=,hSH#A!^ R`,6@ ԧ IOG°f5/24XW鰤&4J5wa^0 -g᷶>34rZWK_c]MfJYdB`y@l]\,0~s4B77+ "Yˡqm-F#ԡ7uB\r'ab(ñ4Xc# +a :V846:!kD=rJ|)ϯv)Tk( D |U|eu<7١ C}OѮ9meaI0Bv}=Y?[ -#Ѣ5Wq3HJ0&HRťJYo؃ x\U8mx (pVYD'fI7/(@Ѥ^fd,\Y7fba@@T`<KYgQ w1t)h3#*޺>vDga|NmLS;BF1XR ܎B]x EUyܯXsnwOTN#ؐXZ"PGrIh#sIjOh|4V֤MpZO|T|ϒ;]oTKdzKŘj# jnړɥQzNh ?k64?E}mY/p +s(jj4 Ƕn(|b\'us6oX<{nڋq.Jusb#\3+WR_=&*7ܰ`06PmBHb]/ÏuP{[9`F 5j.?88CU14k)߮11hU=R'Mk acOPDԦsnQʮ<Dz"LqGmϵ7z002d J,k}K9cQ8FeuYS0lU=hBgm >\oG5ֲ5Qt>,*^n˻ywp1 D֝d(О@(E.j,p$'Y@=_)8hOOUD˵`M}&&Y OmAv4>Vqп1 9 < +vL}\ JBVCܓF7TNօl<ֺ:u+; ؂=.D<ϫ('.πwpfk`n'N׭nwޒ&d.HƥIFV .CPp;edXq^ [ĥ<+ cx V~fC,7ɮh&|/:?vSĂl9 `ppz]qPq}uc@vMA0,5qLQ3p6ɺlHBv/x~cU7W6@\bC K,x Y^Kō1)S0[E+iQ]g.TP8x¹tdRm}FX\ / CX}7=ԥŊP,oCkm[Z{MJ~X Wۍjx |,U#ae'qIU@Qi7h*PS(B--fRYed@"TEY.W,]8+`S" N w_RQ'I57Ơ:?LK).h60Vh7aTeq>VLw<[7?5JHT"s5rm)Z!2(¤KY,(PV䴐̆uz]3RaB7y8aWך,C&eEWee!*3x&`Wz{e_WKzq*~åL)[g`\ǾWH_$bcEcw Z8\滾UuRAҋ ֏MDM(ԕ0;?͌KWwds/F%dVa,?(yÆΏ ] /j @\bLXhĘc kgNP\V*6 k$5lꮜWh!h2(sLMxUen[kRVuiG*z]s4z&O }a%8]m LSM+ubWc?;Q4s]A c\giیmt{+Tӳi;u(I=職A_q/jltaY7__lu*nmSv s[z7 y!Y-tiW3()϶zJI$qOsE- 4H WgRCʓ.^VvBm `bG jj sPp&6d=:^Չtެ+DEj\l!rR]}8`: hQzR0-Oɜq{Fy)>G`M֬k+`͆/wC6 ϬUϲyÛYyp1;> *̨o_n%qɊU{dSRw [Xpl[F&r8y V7XUG-R\ABV}@\6I\KU`{W%U%߁Bч.kR}V 54 T^ޞJHx])>WG+ʮck5TlW7PFx=ކQ/G[-\[z[3qI(աB) hhZWd{P i/ЄQj P^=ٲ K[lƀf JFVIks*sf1<4Z@C;P2I%Ev|1lb5yisnf:"JEس*j Җli"2qnKd2޳b8^瀦X J2bm} ENHK>)|S"X7e@xp#$g]Ș^Įiw7QEy@̈Q<aP7|36 rfV aQƨR$1:c∪j@ TW<ȑw{8]ƅ(0l.稟cyJ0,mkOv?d.ez$hZʰs^ Q@hUI*Sb0 fd7;'Uџ%,f-anOeW 5'6 7\͒ҳĀPm[JqHޭU5?3bBmR0ۓ31GGϡdj%oL€ٶMw&K[T l{j'ގˍTEfF!&;Io٨ohoaMc7đM94aCT{Lrs2@2iW9vL΅s!cRj@]Fx"K*ɲ-CJFhk>6rWҶ { 2`shA^!-+njgi.+ REKfQ,݅" C#;e+fVQqb6dZ*p rY\q9_=p_t| j[f7ěݦkL/~?7T }󪫾8߿y{/o~fD8/Ru(۟ݻyVſ}^xvƽPf!8sG%bZ)]iI)b Lz "GҪL"yEyGNx :RKk)zϷbb Eb{3E,pu!D]`ҋ'Ӟa㣥,%َ ;yrf$!U-V0N0 ԳbDC^zKp#"?r)ԭ^Í\.y BK6z8w^O氓zbgrt;3P {?;LllhRcsqPx ! q]豔6]P je6eM"gXFvx f֦(: oFEik׈Ae bQբdDTf^d,@tCc]8ߡ icԫF5TzڛUdN%B<\Ua,Q,W9@9HdcLxd%ѽ 7ó c{ LQ<iUHb8DDPk%EVS!֎I\)jlVsE7(ygb'8&Zttxd+ QL*E)>lBƸ.AB,qڤB0e@rEl8"X)"j<H,)zO=1"R 5yTBIhیf0YH%rUb8@+h毞ygVq~<Հt73\Vݼq B.'KL2ܰ{X(`wJW2 mgTa*D}_$Ƀ|9-z&C|l Bc?P'^J+4xl+1yƋv f-9JL@7ÍHݰ3^`B9\c PKv$x$ĥcf6zwWdTNJ!ָ^Ў^[ ٩g)*~f4TD~{zy^y>铸^?>ԔN9i5CTH 82}KQxl%y#SaT+L2Xɫ!~A%(J'䏜ײ?VelZb"@ꐰQ<[/#Cv鄺m#\.6,2V*PUQ)lU&K\}r&UigJ~a%>Dj3цop"´/]+t1OR+T)F6ګk"Lhu ~s) ZYY)ڡRƉ-$¨ E^'YEy9=;*0mzˊz6+_IKEae$^Z\UY SSl ?[ޗ:nJ #BZRQB*ѿD)DɠdPʢCVrxj~N;/O0n>NI_q&\QK3fkr,M K63A RmĄ5~'誸:9$E\%;y47qVgEkX)+Y$TV´KL/vNt+1Q}᪶b\{%@iss+5GXM m}wY']EV;!q/&JU+KpJiiQVuYH߲H4I4]~Jj!r0'J- ;i$Ы6)ޓŗTLBj ÷&$I1aBKuq9/'TdȪתYCBKqtB5 Be.-eIv2i(Q*Y"pnJ*uGuslw4/Î`RqOAf{4OB`s"-#9vC.belh?BC+][~S|;Pw??|ݗ_?p뷯^ݽ:tW77wn{ݝ%O1Opn_7^׻?c~x0/z}D~ğo><:>Mg/WW/_>?g??ϫ_W/|,ƞ9H!>;p֧ErgoYu։um Yy¹@Yu8^I-6@xӗ:HH!&WNj8u_|u*%_z}l&@Bm=I:ZD|i?)kL=!ř?i`+MѲCxdbX{_uCC}a{8oպ^#,Wm@.~=ޝ~DB2Lrzm"hIhTe YޠӂXo)K nG48~YurN/$ 2GfuqhoغE:xy2T}vnB|ټ? $q@i?P[{$:ߤ, Rhl{pjqw|eY3aGw@ 6~Sn%Хߦq6:z S,qG˚MrH[ry8d-s0N#e}DF7YAnS7wBպEqmV^ʢ n .A&%Q7e[CdߘJ7q ]U'<|lltFjU.)Lȉ4|S, 4>K@2Xj?TzVbU# rbh!2gfdcPj}./fUsot!~bQ5 X׫A"kf[&, %,G4QtKYqGzޠ&u; e'Q08 ތhDXUpyWȞɢXLIdtf-ՅwrGxmprcv?co[XTM~lZ-`L,[ŝz'Q"S<;' Lfg9*Ԭ%' i]рIyD 7-+ ].̓!s|SIbY(x2Y̑)PōiSGriV#vT8cGZmi )ԂfQ7=\6K.d'.eY)ßչS !QGDFKh{ɔ e.`zS ,ATy&!j#-ѦZ,Jm2GB4mڅ6=kZBPlYZF0HTF@*)5Ǚsl)H*@@-j7tBM5Ӣ©s`s$fny Tz6jo^{/^* ?x+>}w/^o_mw?>sxr5W^^z_=|=qO4WKf1|8x\b5Po$!PEg)qIg4G-GMx/QWOF+.w*'œ^P3 Gz4,0 Pet=ݨ|va[1r~CHY]гKg`_MʊPh=Kx}dp(8ʐ _XQêҬ?^Lda8$R\$J\2LF06DlC˂E],QT;`Fϑe=S liXyb x[UWZ 6$J "^i b}t.8h ~ɫD/d5ԛ<8.^ HFHԠ`$5lۡA f~ y^m -˪#dFEUmD#l F q*I.u< ܶV%LmRm\\ R㺸ps#ULRg(hp547K`Pfp6f¤e8]A'hWQoNCHf܀?#;W1PtB_+$ ptY$_, ^お(ePp%,BibSTPl#8 FRXN$#5hRha,oaflU  `ߟ|q2mg-b/ts1#7ɉwO "ԓ`p7}UrQ=cbWD  ;==7&]晰jYK;޵j6Y , )eYUae%хSOlyC_4te[#y^KdQ?a:V3qDo4xE³=Z<ǫ%!Ɏ1LyZo\eF/s䐠1.jAW Wɫs# KH= 6l\OɈ&\o>,PXB9a=k:14NuX!..@k*5$&)$_St3i $ozdm2D_N߼F=aھ~g^uޯiMq#&m ee}9KIğ#ɭ !nyk>NQ*B%z-d=X7_>i 5jy &DB 5^V`$}D\:RIJŸhٞmC W«i .l&ieXN@Ot.be& IU}wt# H] $ʢ1+e. ׇ 7U@Es!py lWexikW:5zjtAܶm\i@,>q* ^@cK3?qizKGt,h&Ch~t:][RR0C#.IPGC1?3ZnؕU='_C.mLCYfP&ǶPC(AB3a\`11^$OR~|򍒧$A#w-n!g03-c.\ۗ*@TM'D{8#M?d/r.К b!#Dž:fg=8r.^qCŌHE(ON1jx` n~0.܀QB^ p6&q-5QeIo.=$mq%I*$JŲ%njcKX5ve*1 UVto Ü ?@::<[o6[R  r@' @UoD^hzཎ#A.YJMҗ>$ ͸!.z:.Vo?Le) jC*my鱩 iER%#-PdW;ZCP4Pz! s/ٗA =R])M h0㍤xdΚFrPT#vGfpt$ׯbhiOb6JT`JNa+uW_h$z]@"G4| }ठf~Ԓ7RVQ(8<"7Ny%o4Là䔭=OSBZƂ=4wH^p7ܤ:V+CKr]rߞh:p/hvUɇYVe5 q4FUTvpMR/Kqh)tzJc}܌p7qMN\}-}W׏2z`#7_7OO7n߼~{{U@6uԚM.X&fNu*W`K&&v iAl@A%Q}="1|l.A[502 5#}(ƛw2l$8M@QҶ8 @H^Np7lJ+r@^c f*5yI_c+RWmJ5=ӬL`iGz(''WT56W8" HfU6IQQ(P֪y`0,vd~a=v8Ax1QԃmT6j \yP 18t]bKGc ԫ𰊥'K}.ՇQ5^A(`)rm}&T2=~ [/kh۩~^J|S% Ǚ]iH1 d ,_+RYPצvn`~}8AP/e?OC 32)HxKb!GG/=%\Ho}wwY~(&ea6Fq/4IF?zlՒlß~b?I܂v|~)$7JzhM)x -bf =usMbgFݢ*9Zr=i| 5j?8v/ "Ak*+pn#*[ 39u[?1rsM0JZl1J::zz|:̟3Sw8z(1nQpW=(F3xׁIqL_v!ʤ=ܙ -`ItY(W!(s8KZnE\<4=2! "*Zcw8jx̢#Ųda\e+& vg0o622B;Kbo9Nn=ɫțT2lh{zK`:Όf8,1A < 4 mbUl4KT}նZy.3ry` D-CZZ-30t@bUӌJk>Ϸ#B7!f\[>K!Sz;^DzXE uvTk:X8seok{ȒasILnҩY7^U.3!{s041˵M>kY9Ƈ4l XIEf2;)YB4#j6m&񻝔s쒯ʹ5 {EzrE40H9Ն4<ݜLtk)(ɴZ*"2fHg7-LxFl^bn ֵ ok㙲RG`&yKjY嗟ߌ鐊$ &!7/)bx{l䎡*./ln.h>'3xa[:@VL>vs dیa}d#e3E6+?qYs*,xI)sK̗{NZ rq |l\<43XKcm:zZ!J)  &4Ojʰ3 xMD_EM @mU,ݪē7R Etp圂m$3,b< Y+ g Z,KgZWp Wu^H=K,[:Td' $ ˬ淔W&h0*wfm7Rw,)Ww'&Iњ[f×-[V%jJN85r̋B}X3|n؉ R[LG:ZFDie^`ёMaJ)td6"e˰A9p`q">H<;Lp؋U8 EUx3vw_訍߾{Oy4ͫ7?ƶr]s'y?ǯvDU J,_߼+})pX&L^ a2aD?p5MS3O X@(sOh89i4vdhzb1PeOFtlZlڨ MMjqtqRg$b/wVMfj8 kv.p需#v7"Bo$\7q۔ƓZXz(sX QG <qfE)}ܫvTfFq `T d:]Ī7 R/ Ȼx+ s`N=1d9+ & NK Y4Xq(yWdtT;~evHe⛎&Y *fm;M/Rv3o7\CPiN jvKJ)lϪ$R3? C󧳸h6\[t(eGNtINMgڵm2c }BXZ+lHe L.O \Q*LT*}tteYn>$.QdD[dV"2$a %fd¬#,)SSr^3\+XrY Z L¹q%z>&EBZIK19KVדa3j6]Vo z>jT02cfxld9|Nf{@šQ uA-{ˆ}'kxm+#pV\а1h]^sq01'fzW:]%4\KQ-IXUx2|cHz` I!eb2X)B !J܄Spf(ȁՔ\xNK88ˌ0&g*P*~luۚ'ClIQ**¥a 001򐸳űA%GIF/Fdߎr։9Kn 3+ eab%aa9e"QhŮUn /pȆmr3Jh'5ȹ)Zse2NˉҞk-uZ\:x.cdY+u:7VJj9s5ll9H%p%5,ęHUƤwx#urwvkzGψkDǴXSu|=뫟Yr= ՞itM?; F_WxPv0 ) rv&{Xx\ 7hKXw')^kۅZ}2=ZU2iȥQDdlulSi{uw|Ir3ywiR>w\"FA_Os-.rKssP\hfeuu*W]GbYA\f@r\v*Zz)}yn#CXke_ Qt=Y4Z 7L]? :[?2 Cq G_bw#jYfMPA}Ʃ,>Npt I/𳄞;zA;Il>v QkFEROiZ#Fj #!YEiUJ[Ýq(*F)%Ma;;;Lj @?`~jsprn^j :6R C/ Ai0A)/,HfgjT ^GqƷ.4Vqa6<6]jүU P)a_}~0?p꯮y]@Meac*߬/*|~>aW,SȤ~eWtGryq}8m%dPNbV':hiI^|84^nZR(S`᠆q'X9,9#x^)r~*Gv.H9ON% i'ɳ?yEzg4RA,E( n?35t9lRy4UQ@p^EaC ,"Y-(ymOl*oL=e91n'ʺ:)lJ^b!jϪm<HjĦ ؗ#u|&: lLJr14o4K _NW9Ty'rZn| 019 LcӈS?_,M>GE3s\X, ݞ1qOaj餗cgR˳J!Φ<*b1Ȫ,`-#BC]io\72^jEQ$t4Dprh~kI*X fXe+pe+g_ZN'gٺ,+pƗ眭_>}h{?Ū7 }|O˳͋ͺ)~/$*6 sF _Y%=YZժY.r#Lvts|~ >\{&LoݳiJsqgN&;d; ASIr3-vc̣rl2MŸ\FZi.v~`ߙ}Oy˳Ul]M靷:bgN k:wpnl~e^~xJ/7$w)i#lS"!ӼL%ɹ˰ .ygA !dLukCWw1X%: Y;m{$2lINF;XcwTK}Y=Dˎ)Q&Blj1Z&Sņ d, 7ij6Of꾛6z=֙4\a%>&>Pgtm\"yPQBjMSn= P$ԫf@w@$q9."WReQ[.q,@ӁJ'@+&J)W\pLg]k:ɔ|&hIqԍ]0mŐEak;5t儐%1VtVKe)Ĭ'CtxnNj2$}ΘnsOҴUH,C5bpRKkXr%bql3 $UY7V[g볪fګHv(նG=@U|o땩Wf'5AZȧSiƩwQy[&0>/+bt8߾ww?0ck<;x)//_zz?}}wi_]9ܾ|͏707w7f>Ňo~کoa_^o\S|wϭ !(^ٷ^YnO~so/lۋ?~pw]݇O>ܽqtk߹{6~3 CF}˧F?o> xvuoWo֯^_zϿ[ط|ef8 בo9-#Gi.YzDx9RΏ.C:IHw*Jrٱ=k] 10U1Z>>I WQ7IŧTSʇM9G+`HBM XWV7"d!8'D#VǼl&6LA7ݿ) wVOdܗ BT6$03Uh , 30o -(8,4kv3 k3) [c**!00y$%apN"!Y0MHeGƒkqEAs5ܒU-4+N)s=xDKM/t.':УaESl4 Lҋ4=P?Di9cNԅ1``'HSn?CY05=hD. uA=%C^ 1%^ PU &,_&I8mm'xXq&Q+R"H˼ّYS7ť2rp9F (V(?XeOEZ误^ݿ~%֧|dܺ߅X_ze c0nmO/?|q5e=zqm%Ox}IvF@0 k ; &z =FBK+?gjGB̟"xvHAZKDrSn(iB" cpDQ#[Ln42Yגyz#6hB.4AH.ߨ"YxGIDO2Z(} Ѿ-)4p{jIYC)HGKFz7Y`"(bݶ8j&Z]94)ε 0O@L];~Z) JE =() 4w(>ؾs X=X9)|1yQHq#g̫8Es%!Tl¼G|S|ZM$%ehYHZviw!۷A;p*|}j-5!^3s."}db!P[H8_-Z/Xڅ@lx測cPN鳡X)ȟfCP ' {yJ=I!= J9[uY-!ai>t oF§F`e=KN2G˅=xVç03g\mbpiNXp;41§# $Y B\Ë+T&skp K-M(u{pjrWA=NVal,iiYW ONcWұhłqi2x)pFIAH*pX7X2!֟c%@d֘.2Yw_6o]M> &U$IvC`1l$XahՈOaYi! {A2,$9/Ě7`H-{z5qMժM(4}^{>}ü=mAh)|va<0Ph7Ղ`!*f갩p"gn^&>Sk`s9Ȁ}An?Ҋw8; >O>nG?t*.|U*nckv \m,?NK%}drTxtܱxX?D\оبN`w25Zpv`9}y,hCD^G*ݛ=npy7h@nO_p6,%b]ސk[iiE[ W5mĂS^9ݡi3q;`GaU;][&uSx܃5X{Qu0MGJ0(cx4xiRƗVo& I>% o9 =I1|>iǛZ_GWV v2Αc_}ɷ.(Och6KH~6xFJ:jԐ]7L{)aVfR}%dȑ5x-v#$"3Zl܊I8݄dg"8;cXndt@{$В—CB"&i:Mg{2'rx ?g-{KoiC\FZoK,F+Fx CNSؔ/NFdڱ-UĩDǬw(b [l@%Fd3} ]TʎG> Ƹ\ .ɱlĥrN3=\0,g/ǼBΘ; 'Ʃ+kXW(vފ6B2aM$O ylns^Y}/`z=~~1B8nW1?5xs|6.Ll|Z[CVA>"$kfYhk*2pJ*:‚hI#{*촥%gBbrkr\Nn{,&rROD E/=r{ܛ]eM6Ah- J%/b1=df؈LM+0;r#G[9w+Ah͆ݝLxHQ  +mWmEGɧ]qH b2~l 8T8%T 'd6U$+[`v X2Y!b@,`h[N[g%r68!EDH, @ Ne>dQ0pCܣ&bcрe`皒9SA=]B|9w*Gwle z+{c)P6n2ykZYWcFBy<02 H*?'cXpCqq@"t(t(&A !՗'4?w̯[(>6BxLwrZ?@ $dHGbEm(]QI+q +vx(Bxr oce\,j0 v;\\Tj*(x0U4k\ TzcPK6Aa ~@prrU.yy#/A-T K꠮NH17AyX"vUAs !iqyEOXe>) uǙ3_بš0H ?ϼ6Yvo&~rE?UKeqerYY6{񨾾1&ߵXYp$XSN,( %lR6_4xUDb[3(Q7=˞ jl(yh4Sf*RJy:e4GC|%ʠMwsPY>N}l8u媫 GyHdX@ԨmGDC@aK adq,(Y(}j ;B t]`N F$4mWGMF C ɽ-@/N&w"1cK1آIO& Iʱp]83~G6:q ~Tw[]x+KH-l Ei{z:mO쾬xT42' (ҟ nY*_n~y܄TRkiҳH1 ^jЁj;%ڔ"hIU80ƈG8|Z-/[K)+rO19Q2}+Cxy#Ǚ3ՀyP$p~M>~B(6[/fƷۿ7G;f~^vG owSEWF % :wƐ4cWCĕc7a7D ; #} c#Ss t`w !N߳Iߑaq1O>:'9J9}JS s@Z113B#ݒʤu]IgT;X(t-sl[DУ.EkѠS -ľ^$P.sKcjHrsLSh}PQK摑4_bw<ӹvK *PNcyxm#PcğoVcFm5yuz&nlG+7}Oo?z.C|O]"~/.u`ǡCY $1-E.VdqSѓg٭RP)aߐ$[+}z+%| z@^$4;Х>%Z[$Rw$GBA]GCA= Њh/|OXOHF&bRDî{fbГ\Mx_4Rv Mꠋ\lsLdpXu#&A1h)Hь>$7T|R!(S:Q %`Փ^p?Ex;4#I_S_JKu*^);,zBb9j#7_@ M]Z6qrbPLY/b/t <ܣ)EIܒzߐ)i̭/Hk\deнaII!@LZYV}Fo֢$SĞ-9Ο(c nYzbcv32J.?)L)^; ;FvN :ҍ iViɖVHd*5rڪBTX\*|Ωa8KxLѥ \m*Qӈև Y SU„%'NNJ6QVZI7$;<~6\*(ĝIJ4ڳ;bgT=ϋB2vs-N_B$9H|j5 qmgHR.5w. (YOvq$%Si/!2R&F&#7 |R+k$˝K_u,mSQ^Pcws2d ҄.Naj[6^)A%~aIUӾ3Y}WSiv r2\UĢRXL\4-[RHi6ٗ[[@;U|pz[i0v!aˆs # O QeCr;*} }؄@8wL4J. kmD9%GBddax砄$n~"@BC},][q~fX5$`hMSH0FY@Z$-tWtW˳33].rն]4Z?Rȫ%cq+%`NX翰/(_Wە_/Nq+@] {/O~:YŶ+! [K? _l_,b/Vr^i^]iXqǜpɗ6=z%îr3_n/3+[^VI/i?' +B-W wᔶp^m$N?G_ r`. _ R~G&]uvzDgoL/<5۹s [S[rJ^ 싅/wMx=*ѦDN#2?|uѪӣGg?+ۯJ-ׯ~_^{u}'zw,No?:=||w>>H}7w?>x%n~xwzpX-t۟ӿ'n_ys~|>}x?oO˗on?{ 7eO^|7=}qu_]7Ϯ}WO~z7o_ͳG,ش /==YJLp]P :#P\FD͕V@FkKf6XO}2V쾞A΄k`<ij̅ >^g" /g&Gx6솞]x W[eCPXsxnJŅ׮_9l|q. tLκ}#gj~?  #A$dI|6䈭 U~G_pB΢/n:/bgjX'۰Q[b?;vIioJԠtj iտWxJAuZNUxo6H \gu e  v6 HY~? ЎrU ֚3@s;[i!r2I/d~aF`,(ۑƅ9쓿K4\Vg%c;,Z1pݖ_ݷLE3i^(j+ OoySM]EwkeNA#.ӨTJDz o: ":|NK{s6`* |9\w TE^_j[V*:b@[_ I8h7'  H;hٍ@RPZ]ϴ?Aj+:޶!$*t*L_qk>""4\ٓ՚IMw鄿TR#ӽЬQpЬl;}{{H=Rh#Le`jvi.Th #Ar~kDFcylAع+M^g"Y8؀#UAT)s޺lu7.FWkE!r,62Vp)J8 [ٷּaèD\D;$<4鞰`O!)&56h?v!Ax0j,\99R&{hsȞ L -lQ`)\31*K¨ba0l E(2NPbzȖFSg܌q*B]Zŷ֞"=nm-QUPR"bfL]KF,w!ZLORf'JɌC Z~.fn:ȜٶpѶ@Y*hM*BO\l:DbG۷00gd߻4N̂z~N &Yk_3^RxD=Nw.S%pf z0khOP`G8<>ObR1t%d]"1@Dg TfVR52mfdQ~PKDӞͅ(,` "10~)mITUfZb!Ph{=RUMT2iTR/[Ҥj##JUw!'V) P%6n!hTQ%Y+lFXM+<#bO\^rۨk-Lu6Kه҆Fq*5"Kpj]xN#K~j(Dz3aTD7k4i!فs.蛵,U@5dr?`^J 7)@cDu]J0ԖA4-8$-:,;[$zܲ@ܱ-{1L@R$jUt1j+Ulg +Tt`I?)# ;ە}bmĩVB1cQƞZH?\3jNWR `0IJ T*1oPn5\iIJ; HWgR a +U*db6T)\tVb){P ;τb%+{WIJ&$*LU6pBRa(ыG7cDU*뛇w?k5D8I F8邻'}z8X:)EI+ շPw;+3'"tFt{9Vrc5kÓ,z lGLXNGF{IQ')l3(U-ejڥJh2-w#T,S6tR9%Kb?K| K9m+غ(=з'\}@حSI5˃XTb Nbmɡc4C"eJv"UOk*&or[?N )kK58@HŊ(5H.n -1C#fLE&S٠ 0۱CfEOtJ`&NP0A@ZwaXҖ:!yr@wWIM;G8}AǞN!MOzC fzruZF-Eewk* Wv>0 `1G0r(g$`NbX1ʠ!jJ/ꄘU9qvVjVx[xt%zu2^skKVgh-@0/j&A "ISdZ~Ifi 1&P:u]ltXƁȃFu޽z٠ִ[h(ЈeveĦ;@8T"-| sm4KŶ }&Jb=Rx,%OfcZd T&xA()\V߮2<3W& R MaJCOҵ1ӳtFl.`Pxl5#EՕ^jZ݉ý >u~ޠ'TPKpȣHj*\l_˓PE=؞k,]NK ɄŘLnU>.̇N: &ħ{E!,Jl6Λ찀lFvj6]j+a1D0x4+IshTXZ T4IFc[)&vX)MӚSbt&[wqyf<-eBb;Q ݫRdIMFIZUJZlT`KhkXۥZwvh/WfX7gGQN %AW*I KS{*vK%A#Na# \YRB,[ &0?;ajr%nXT`W2.jSz#@K9{9Wu: k۸ұ3:CQUJY-B[Ԗ,X=cˠS%]L) 1 <\z=j֎9 kBKE*?$ՠ% z3I#ҵ f vTqqͰD~&Lt@a[NLwþ NuBpkӳ|Ch"8(#h Qa]_2B?UXn5H\Nބ=sCfM1Dҧ$Swg(Y`8=\qGqJC`)?~']lzmǫo"?aKe׻7zkiu% ?l{Wƹ~1ŖzSF+kLR5_3R]ÕXb-&Z\4{j+)q W &a%;ҏcX]+r%~4qK:dAYRT$>~+Tr&졙O*6TS {T)+f0+m:-E^T*C;&=T?+̞Ȼ>*܏$ iR\1'7SoMnfivf6FEbMGfA Sv!_X'=I&J"-L._򚍡" ) pvR4(ΔwxZR2$HɅ[#0 e~# Er4yv ح-mP79͞d;9 Ép _< #VX1V*I5)T&zf`ݒi3j+|=M [wM0iu871#^yɗyBWc\nf:,6* h9Ksu2|D:}B,yrih +iݙbCu^= #dU3.b~sőg.{?NQyUbD\mI0<(NSJH()7q~WU>0#ԤN?Sb*lҀRZ"?'Ĺ.9>Z4ϹA(ɷsa"vUȌ3su>͞At3a>{6R2:+ӳHM>WтՔ5A2 @MrkK3'fuFp^KzVc4E8-`uZz-rbr x[Xm$urTk4\-d2Y&Gnˤ[bTsO peME{ftNpmfg2g]m<LJ*,ºR7بԆ]g9<\\9<9-TW';;eߏx:kԭ mUSg7q^)H0I :EÌgu(Ƿ^ß{yɆxfśǛ{wǃcoj[S#~7_w5 '-Ud.+}{epl5VHoXftJ,lPӃRqCj E[0ġ2NU6hm)/ N;oxhg+^UQPT9+';=ޭ7[AY=JVꪌ0Qda+;y̲.* A4aXi,W2e#dIʹ;- 7hunYMg'7NlIKHAzW)駡{8zâeq{\_>oKD_N,2L[mu9m+6ICeScI;. ݯǜ8#US s P)B\h^RYUmBlE^!@- SŒ#S ۦ4ؚBkفղ byzDħ5f56@GYA5 QְF*(iQ3H _Z`,"T &&J6*~ڶ,[3#tqk#wf3[# Y23d\6d:OKuv+MP1eNj&*rO*p7+J"xB=ʨ=סGt`imK%P[EMp5+׹YpomڭvG6 6FlɦMi|dvLy#- x}tǎ/`*OE` rٛxJmNCxӨ[A:HƫE4{X,ߜNgQѭ (elS\J-TX\e)kA&g-̐*jPǩ,Cm}+"!d1W=ryDQy >d>ZW7k@.97~ӭWQ*c#r!_D䂻Wtɛ8Rs>KHY1P$i91dYOZ'17^L ջ#mfz%m0KZfYXwc3A&pIOux%S \no iOd?C^k*pr9fҙV34ajAph(tL;eDjs*Sj=C(p+EA2-Xו~p\2]Uv݇nxfkQWHv֋9XlTYei_,l@`\֣aqL4۫@8YC}ږXR[c)`hIled+TB|fFgt%c5~*.;",L木 D7SM5 i?2%kXj;ʓ_﷿fIRgLWR$~^ QnG}@%$5EjSC!BC0}[xwr6ȲNqMΣ7ldl ?d*fW+${b珕.:_q\BE>t:έNoPӑm6],a Ō8[`] ŔYKM!. 7k ExÜ!Ɛ4 ֏yr]I_"u58^#;lIynP |7,ʻ㬯lI9m~aSXLosy5S@׺| hi;߷cf#>., uj)K[$^@4Ef<ܠe<y|@[eL%u$s- 888$]U>c/twq<ؕ<ۀP[g9H4LZ:$@!hҺL  /P³ (mb`0(E*ǺD~Cr~s64Βj8p_*8J zWv,_gC]mC72i{3i`y6:#~{ܿ{÷˧?|s_{ç7?맇W?{Cۋ>ïY>D%٧o={xO~)7yǫ}ûO><>)}|we o޽w?_p)^}9O [O?۷_?},ǻO_wo#xu}_~&o^>߯_//|}yws9r3UC/g[*+pN:6B64fZ:P Sɻ2z D)\L9gcƂBI\|:AS USY6; ՂX>),ޏۖW3F%vJ]E;k^٥!ϾY;yA2 +>Ѭ<l&)f-CH@p0#4/~TQDf)7T FN.u͆}(U@}ָ:e] qw 4c (C[CLo-iȶ = [-#լy|`-7}<n `kʥ ;ً_\*L&ONwhUJwtx>uu,l# (Q^İH YHj (w^8tMs;\q ǼRnnH~:;?ʹט4"XtтȹvOj< W/41V,= +GgG9^mgmҼ%D, @Jȴ12d. TTYf*fhU֝RM Q Ih.`+9}yŁC vpJsȢ[>W2,Npk(ܐ0v/eo(&Nգ`%c].!Dz0|%P qS^@Rvez^R} BSV & S\ud)0픕Zw'GV<4 +((}oG4P{$x+l1tǮ4.sU,GCS6["ݦ=`N7٠&&Mz1Y0=˟9jN:_} 77N7Z8Άu3}l hΆ)YVAƷ8E rD)ɜ. utn/n&.P%кsu)+K>91q$μOdji^ W΃$ǜ% D%$ilK=Z9,YMeyTUD4{|{01,/U=NAr֝I#Zcs.LTgaqTeDAC9OBY J9iL 6dbHc֪4rDjR],tp֊1bW*iz0 HRjX;N10GJgTBxB^v 0eQHr o'uΕiBd<&N&jBWIq)Fר0 9ixj%PE)Q'۪ 7X x@E醦84 i0xtST> -R9Kd锋*+O! !P0qRs:.CMnYm @Db . Ene}6f9Op ,Bco<)2칳9OŻPBzR˂G e/XV].3E4 e`J1`6pͿIn{ ^X"utKYp]^if\ely6>ISi5]S/\alayaw6d:nyX ~|i87kPɰq98kCʀ[-.mc1mL*4Z}@ONE0lʹg\p+6,cW dUtAd~0^g:Ye, Ec)Xt]/J6fa'Bu~>1Gբч;̡rf|"MުYL~ƒuҍ`q\MB,$`I0"QTi>BQ!ՙ3pdg@/^\uH(ɁtϤ(Zc|YQ J2q=NMzt\qEƷvE/ga*F=yױZhyXP-7WN{kv,E)pb0CedoDp3uI|`^I_LRSѣQتM夔W\W"2E*7)/^\F0Ej+(4V9=]}X-eIFO#k57~ Xk]-tX$&,-$ PIʢV@TRT2?lZ.8d.*6yC]jsQ:BLABT9Ah9k&`y(em❁ӧ%CŶkLR WRKj*\2t~jlJ,x KFLtPV̎+\@|Y> Z%Vb5QuXTOjyԖWKۖ4ٕy㓮uWRUsx ɰ-lc,@kH@^R˞V.t Ѷ/X0M%ĒʒIvN*R݇0,. ƅ2|HQ0/Y?>,U5ͧY(diEl؈6rP[LHb+USRpyʴYb󝔓\n9(aw?xNDdEtZtL5%"Ť:ؒAo 6aeؖ+y]Ss׹b]kT%nRm'3ȯV03+SW9_SH}!zD)$o@g;tP=舨z]EW/M1SA"hvOjg[\X N//elf#X7GDda*vBn ?zO8NbZ|t9Ҡ7a~w-52WMIUوdw@\ ȔIԖo={h1D=Yl#&-0Hj˪|~};& BLW L;ZJϣ(LV^bP[2r[z{fVc Mp$%vmH7LƣΨF9tY/J SIJdLB(cqtJ:4]I bM rGFxj/5]F҉|C$X]NCgmG#UJ9OH1L'G&["-.CnJ+_i+[1xibX,Nf}U 1ܤ•^*9_ʰd 뇉0MPF2.d V*6FeT3MqNf3uk=P72e%䶕Á)2fG\l&7ä =XFdB\Trm2ŢZ!I]#R1I>C-0gnìkQ+ufM |qV&&*\KZVL+Y} U75T}TՅ ew3z]mYs3jʫGRΧ@l'ǴVdϰ+q1 3H5Jһ.Pi_9_ w.IXdQq)eO5@%ojixƯ,nEaTϰe^ O[j:nyMb,‍V̧ Y`N9zl]ӡMf׉51O[0[&V(a5oӴ76҇Z Up?)tXPd&+{!')h;a0r$ 276R}` ;"5"?l =]?Z)etnZawXx( 5etbb%#~R8_ogu°I +Jo4q2 v<ۑHKG[՜(q-g!: fj]]94ל.z }HL!e|=y %)r(C/efWya] \iHuRY书p2}*nrv;Y5!"ʴT7jê8L)EH,@Ey?a1(jaY'iea Df lj*{me[҈URKEK1J!^&,a-%n;y9)yl@u/D-j# 8E&0xJ=MɓDR',n!P|Mw,@/Gg`U=vP *zY$߃EbŅop~)YDَ4ssI"=؝T9W nU1P5Q&R`"xfp[3˞Ě$W#{squRTb.ɩMdqB^q̵LW'[K KѿIns69ڢ lr{+pQNriS~sUX[&v8j,B6^M/,ıgԄ > Dq&z߹s!V5xg/;V0pdq4?cE.GVl:[hxd]SU=OS. zk7! *Y *rrԏI:n0tmh;SMl4lB5+܆r)`w"nLGۊz rv'j>;KmE=l\ArPR- [ժpJI6ƨxP:Kuoy U/g{)j&dΖvV1o D)XIDO];$t^M!!_"$y䏅m4X9bMC^ _z]pCx ?.zYIsAɛ'v qy|K GՐqяW̆ t{h@@&`2"ZoWꨈoxe;"V:M@b=)BJJFF4ǒu]6ۦݢ8 tmL0w@EY7]ԧAm_-i'@ҐVw8k.F!1@-0ySĖBs1D*4S$z;PCtJŴ\ɮQk^nK <,6͢#7(n#d}'cAH6nrA7`wup;#}Qo NkF7˲@IOŨ!(Dʳm獇ޖ\, mTmwӞbtu,~LwVcd[vR^jsMW'Z+ڞBwJ?O?}z_K@[LL34[AY?n!tp۶n8h'(40-k]9AJ,gUmMpfN‰fe{<_A{0L_k2Wkq8;l] `w_ *d;eCք>m`ށnZB5zŞ'k8XDxh3,q/wL Th0Bf@;U80Dg|8@HT\fsX<1n_ 44i<(Pam0nހvKy|܀;kI{i8˂~VMB6Lጘ]Q~!Zoe&(ƤW6 >O 7`Du64܈AU,&4fn$co/5Fk+z߄hfIF-%k=疜5c;Op\B : WǗwVtLmYmF D1GK@IRo_ן*Qz*ӯ^ z^|CXKO  2Y+1%x9D_]ux<P!UcRȚH@'.'F2s78—N([nPϧS,L0XЩm{b3<%?c'aH9R Љ:Z9if!Hfײfw8Ks\KħӼ$ A\/,&_>!+Z,'"f؀qLF{꧙ RZpH ĝ9^΂5X1i'm+:֭?4U6BC-}YsG3> q%S)fRK-qgaXZpP32Ïp"* GQ,TTg]z}{N _9.^e^pe/g}<6kE2 : k7 _i XOkbx2XD{k-ĭX&\c9AEF!=),S82]_sS:,%YY1
gHrla04b@LKՊt(@-pRd򘙴a"eH51 KdڤʞumXe!b)h4h  \*CNS㱙Fxr< #PwB`2 iO K0޹%0dH5TM]WUaJ\ռ VG W%= ĤO^t(2Xf•F6Q"O7lQۮjK 9'‹aB&23!y<6,O`4ֻNƢ z(EjY3 *)"T @)4J!b(FfL#U'" HТ2v[$Uq2oCGfI{ݍvh N,CR,MUehvlyBTQ\ԟvJK[)'>zip vdЁnڗx$6~x)eUV{͋O/Wh~7I?J׫~?W3_CpHE?#r.;|WߨmpKe7o/oߕ_s˯]/BUS9՘w]BJV{l m . ] kNX>6#-RjyfҕQq"wYfuDKp.C,h|U7Q. GA ~27`c[S$DлXV ɰ f["cTדr(<F9@5_٢wq- "jT8$<S/1$s;bqFhW9T0*"!-/ e#,{m@7(Bj$*KvmjaM)EhӺw$dwZM*;&&`N@+<*QWDd|*؜&%ƙWȪ`e"@" ֔S\ ΈˈJm9` Tgr! ­!HӰ;֌2PdgQ[')"˷@*tb] ZBFյ-9e\|á`9M+Ԛ w|c 7Q2$Œ& P-m;X lY@ffQ>,Hp-cUІyc\;JHr7 S ({C<&Y V1:lvFY: D1;I'}BV(/4L| sXuCUY"L(1>GՓ'\f[lc<<XC "y AhfӜU6B|Hf6-`!`|@;1:B2Ed&2cZϳHhL o9{G(,(3&fsY(ڒp )A=AZUMM{W9R* ͳ(hgxˬAH5e⼢1ox>NJ#hbF̡lwxBF93ÀuM8880\𔪡0W3/riIV71bArXX8"eSQ5Rdy@T 9 SkFy - @4}IaG1` c ʩDBMvJ.hX%WLi6 ?@CS ՛{ǎ@v +u~NDxКʍ<hn`]F4MëkBqAAiVC06IuTA3Lx bCP"ِqM >4zNA8~DJW3$F{>r ԬDڞwͣDll1Jb4S4ep (6Jz*_ϒ@8꫎,Ć."O[.'*rsM(y\n,(܄ف4D LWGG ;^!s (ɕNiyIxoG~Jtj*%nlajҮgs90nDA{)!`G@j:Ӂ_K 5`i}y;ՎC(ѦF8t2#?N (UZ>XiErwY۞|"zJzpZ/7oXo>ޝqq{uq}X=<^\]^}x/o_ݼ./>?|4*?[gZe__ǻ{X?w ~}v|^]ջ]z{_c@ɯupe I 4X=KԿ3~xgϘ_mؘsYHU/+ކb4yk]n}& JO.w=hkO_nNhsq_׏l}s(rBɲ/R%~AƩQ1.I (Ή#/%PdN[:=g[? ]|L>mѲd>O2EsԬT"S%ʞ#f#Cg!ktooax2{ίI] , 7?Y =|4D unZF=͊2LpzW>:&P"l5?oN&/dLꚌɸtMz&u4,o3ÿ܎ɲ/Z+\~|<;տ.W.>{XuR?|?{IS 4S=P"bBK1}v *o1|eVwM3tÐuPChSjǞ8$#O~)8V_9(+MlgΌ7*|嚵8S&s?m &ZS­W T0\ބ0 ԝMLU5`.2š YFs͕=$aV*2Dˡllj9fTZS)L6+dPqW,떥Q{dn ƲJgJpi,kjY)lNaVҥ"{ ,ϙZ6 qNA}P[nA 'aǖTlK`HV1lːF!DX'ٖgǬY-p |5 1cr . SqE\I̹utngsMjƜ$Y`K86h [B)k>AQd=6fz#U4 2u ԖG mX%ZٷGϢRCLu"g[^X$.6ݿZd1bI, sPbiro. L]xR{T8">v i `&HU @ " =w$" ,nS%2B[m&0JמxbВZlxlE{(nDAS;9SX d8 wm) Ti0Re”4i^$ܶmPhYw`͵;̎A730 xC=c[,|SMKb=UdjC_0cάXվigvU73ߥ(6%|7> Υ^ S&vDQ(W#mbfb1BvɀN7h \;b'VwFSpƃ,ٴtr5n S6v>jIggt*ԕEyvhmAL&=/`E=*UPs4*c3WۡW_A~/߾~{5k6f5kz~ x@sU~u=d|5~}* Oponؗpv{^<ˇs7,ږ(5d ̒i6%:!@0Qdfk#fGS#{ gOޥ{bXpIɮu\Z ^M : H1B"xQZ4e62u>b>ݽS;0 9W3ˏӲq¤5YռsRW2͂;+e( Sq%_N iPK&Ml>X`MImJhM6'IILֳ+KLxL+:qଋ`ay/tC#gv .J p)ӽdGo3{Wv3,M͋S/"{_'9ޔ^4[Ntq{]hHJ{ALuz12H",0ֳȸu2Sh󒝔æ::Kh6<8Ɗh+ N0]+gt͉ W2炨jBlWÙRWEL dy0n3äC^M\d?]ť6cL6#%/4/ρYͣI! !-[δM&l%P 59ڜ 0م>~GTCͫQm,5"˟3//|qfZʚgGqfʼ"&k{*ܸT=ՑylTMœetST 9B}檝BN9ZZLcda4+dq[5CHKϸœ <3"Qe.n$MIMYBUIe\z+oS>Fj_43\^RfI͕rLz9ZsG_,}HMֻ@T)cTRծlt&~;5t&}) !r 4Yvpd(/M _qdFu&ɖ k H85{.*x3)dIDVΘ PL_Ț&rvG&8Ư[YJYiġ񔼫Q=u+s\XYlRKqk͹25{M=e(vN#WlǭpZRZ51c4`q1I Ihqtv%ڏT>e<՚NbkߴmTy}'M(;%,B u˚#RڢZ)M瑪AɈ:֐b Ft7=נMU)iRZ6J5?LmNC zR XفEZ +o;;WFZ "h.{"vIi!>&lia@Z#xdٲv%=%<-V쿭ENy=mwW;:E1wݛCFDrU\k%Lv3XGO])OasW )3"J3“Dd&ȪNw)N!g+QCX Onh>V;=0]XG^y_[g!iYކ];xGůX2lųnj^k}5vQbL3DRY 2pAX|/t^Q,?|,uU?[~jb $v6H3t%97\F9^AڕoclxC<lKH}G!儓cDDd=0&4䕽&e_ŒmRF91$nr'oax {+QGJ ݽ~1cDmOٿxZ`.&l ^,NLnk.8NCmщqHu+OY$5VKH1#߬vnG/~Bt#J_׌5+bC̃:3/XY(a9|$2;=!́KaqI<ӟc Β(7⦫ꡲwM/Ěc>!ƥL C-5SYm7=Ǯ sٴ=(;:6`m q׻#!G#&XbϏߗGY7*+ciuˏ:[]l6+G Q8wص>U/INeN[ܛO/5!evc9ǖУ̓gŝQ8~oLnbVTԑbG6G#V3GRS%fx) TJiiƮ+f 5$7^aIGVڢMmGWQۖ6pyMi:2CG"P|48p8؟Jj=S^{}%j_]=K+Nۍ7Pmij FVSJ[j3 yMYA>jˆ8H𨗒/lҶuj|j>+rD ]081'`Yz$|~YYnVҒV뜱'oRsyp"%} Y.r(ΎȦ+rJsAsN-aoo8aeg5OFؒH&ƣZcA 뤥8q=P(}368,<ߏwѯG=.9 s8fIIN+,z"Ԭ@;ݕ0 L4EX,4us$10[BZuqDaZ\hW QqɊ LJY xfL݈ 6<7?\]=_K4&k _|;|jl%WdRl'Q N_|$p魚DV3=@#'^&EcT #e) q%zI7Z'ί*Om$ z]8gˮOI($kzPҴbk0Qj˂=-@78 HY¿X[l9LKO+H"XRqJ` ;?+*X\7saMmS5t&BO0]ꮚj^7RLVDHxdIMȍήw8nS{<a¢aMxRL óR8smڮjKTNPHyٚaħy@#dRՎD3#s83y;fqi;o3Քp#OeO.Jz -1yԧcH Ғ3#4QM̡nveIҌY ki Sw(}H:}5 ~5A}XS%cƖ~<-ٽ#JA{U3fvIov;D LeX/IOA`VE%^ 勇OCn<R[1ޅM JB~,ɂCx~î*+/cZ2c7bm%Jb6HL,lYiٚqEf$IZU2T4aܜݡ"jvSAbTh4u91bm +S3&f?v+A}'3T-M> ܝY5;K}bޟs< 5Ry‡t>)m 17(}CӢY8$CAl|>ɌaH)BHmAYx|(7ذD,X0G\0QG3f ya!~op)7mHa02XZ3,",Oo׫LFBD:Y-L^FJ'=VTYS3&ѩ k`*~(SVE*ap0eo\瀻MZXSVё*/# 84"Ym@Nxq԰@0eauCX ʈdY{6HK"ۓiJ*2oD8T!Bu .o~85|paHvqK 6abzL fV5,F| i&rY mh I3&%OXjO#jʝ 6!N1(Ύzk3߁MDՒr⌋l<=  5ǧܰ_a ȑC;xd ڨ_yRH@D20tUPF8i$ρE"t.f{l< eY~*w (LmP8DAxe0:Iq@8 /ޭ<74ό[8Y\錋D *ї}e(8Tlf FTdHu 1IƧ`P>4(ش=QS$m:f7$c0&3VTު+6n6S,r$O4}hfFXH,M%CU{$܁3A5ouܞp.efbDkGñ Y@^O%W wi _[iRѤh.0` QGt$ޟN9亡&ի A# 2ySoȓj&K`Ddn0AhQ\ :keU^%M%S@;h='||X|rjmcCԊ `f'AA2$ dYU÷ER T}|V"XFD^=Tc 0ܰ9'Ly`Շ %@$'$xW!:XD#5!i&T+qߢ Amp3]HxzxM^Ghcab} +1g?x|ɓ"KH C%xil$#QDZRd5CV-uKOW0K5IFK0';=2q w08g!4Ɯ1-Ei~ œߗW?ٗ//7ww׷wo~}÷~eNwoׇo޽tufon|xw<!`Z?5N=<û%goo>޾9LËO7oF77o~!z{¥x1/x7?O7|{yK_KwwO^>_端o_</~~?W; ~uM_n !8;|p"'A2gT.0ʓRQ!6peapfwҥfLŒGܬ*;qNGM¼&a|3*ꎭo >/ZB"[#heIgy֐BGX3_Lc()Qp49LBvۅb!{w}+{Z%g{ΒK3HQb8ȆYXx}Ozvo,y,"ٴSugڒ݈:h/a +ƙVR,O'~D7 "p Ymxch)WY*/ZšT ekXMi 3ƶU/VO{w'EYѫ[ Y3nG`fN\UBh$KLeFnZrlg9$I?X(aURV|{8nO/~M8}?z-/Jt^pfÊB:#P<햰*Lr^՗ ФIYl#4e-)(OoOڤI.g02(FbP[ς spA洒 $+HZ| 1G))LJ;j4v.d'll11hz iBr?"U5/唼5 Lڪg" ihN+<%+Eɔ-DiHKH8Y0**vLãu2ҵUDhXW aVb5F.ʧzz *<7&نIȒ|8߰Ơi˵"/, f𘵬iB&Nd-Io(& (,wP˹R^=S # 9IH2/X@~,"還 6ۇ4d7XiYqDf FhT'Kiy@ODY`GprjG(.4Pe8yBa};kTZYz:*W'gz?t3I!hja_qxzULr4bs sQ‹+5ܩ3ܾ>UA<ѿ\y鷪p8\ͧ뻏7M1&l/&o9Thݠgx:8ۧy>kyõb58]ӅVt +8u45(j4=8-,BJ#s bX g`KG1l"!R`b71zxujPSwATX*ÿPC\*kM E汑21OF/QIu3hAթ^1$=:@ARj\gyuuvÅ|κ.F UZkpRUPrԈ^KyL"P8` ae6S!zz-J[uDSCH{0@u[2N:RW({M^1xh[OZMaP@&YI3ϾHrDHy {Kf.TkEGC Bh@@`cpa-Fg@|XxoYm-mSJz guU2DW3ޑz"dO ;Hs\w-B/G{!;ZIPŀUbFtQΎ opH:MPn̡7hntvlCmөXN,W(ܭ˥VƱ [͑W-w1c3&9_6=0z=Iv`EV~ɟ]=]^@lj!4>m [[gUHfcMu t;[is1:x)ɥ6^*-l ZFYT-ۋmpY,Zj*Uj.+ Z'WQ] QzNF4*|xC"bfp5Sdcj[V,&l_e+8PiZ.<<3 ] xg 6M@ SVP3S:Ŕֹr_M@T t3]үCiQX ͆ c\G*>LV:E `L=KK5g@O@FJKQ"~dN=åV)eZ |U@y״qhDJw\^mJK4qB,SE>h._؛ D./壮ΚP 8vIgFx Ч*lqTzo(ӿhM@iBA⻫ڕe<&HC"WyÔan2qѴ{R V 6%⶯m<dK&ѠA5+Yq巣I!p!!e TrdZZ|0Xh sLP\*\+Pz;hf;ż#(zd%{%(~l{5={DwF{u]V:;Jm;- ("R3k iY`wB0zY$ci0'4.[oکB.MF"Ȗ ;\-iэ@@xTLc\X=vn)*㨠瘼|J9HsAq,vB/Y2FSx^MA5cРyFF&S:xb lx3K1kE[O"`tbSYmmFD0>8bJ;"&{{< %0X:S^Yy#zFJ/g 3AZ Gq fj+___(O\oGdَF9@ (@=9=y B@B,@ @jP㚽線O*Kԧ5x{^>hM(vܮq4WǮ ̵z8_NQ尬CLJ' ;x>MI,oT,YtLnPt`1 $ؔc:8#"mMlBs[,>aٛo[/SAAmx<6gl95~ѣS0&y6t?u 鍜#I"6d1 + q|+D)"}i{qD@!/mlUkwj{Pp!*_>;t’ G(]0Ei*U.tԶYҨB=Ie vZׂlu(q:?nJ F_yC̀1]udy~2zWZ2PdF!huzΈnj,qq@?-$56BC{I|"7aNr3{Rϩ eXa]F pM#X׃̫ r^!w=uKsnH˓ts\jVwǨq䲄Ё7W -0ߓKJr7/(󲥩2H&r29}RI};c q6E`\Hj*NG0>9)b x 18#:#d`D ѥ3@OPuo2"[ul:@~.Y*Ik'fL 0zdǼaGPdϾa=̎qvHQ_a5J b ,9@ECWPY=d^Vi{Mx1o[ǗOmX8:L0S^RM 흼h 흶ĀL3 ]@rg-JS!4>_=mj=mJ| 6~;񎟤U^Ӧ[)Ē3K7f[;v?n{u>BpF{(Oq?J${Q:pߎݘ .YAn7>BC+}[oG<,[6lG9ƲF<#@CH/ o%/MuWEkHJK\"2j/{<=OVkylcE,efov[W|ߧTK]OmV1Pi+2 _mo]FfPlʚ 6H {LԹh_!Aqt[0fO#Q" E-c8PKחxkKRgtdF.2'.Q[Kwee!~% e!ҨyŮuH%5Lzu=~o>}xW>wrOxݾӫ_>|^?^>o/,~*=z=/ptZqlCЎ7b.x]>%/qdwgΉvcvS!@]4UO4^١1vã'HRI!$⎯~{?z7׿ݼA9֧//~&7K.@W&]7XB&OD=O/~OKS./ Px!v?߼tY~//gdVg苳BANfQ4FN=9sxTT㒻_#CFf(֚8Q=oB,OKtJ}pxǩd_.-SI7e GT @4AoddDH2gCb>wJu:: [}LClҼEoopRqӔtGW=2e,U;i0&ވLƏpxζF` uvE}벯^W|]sx{< B=Ln"CN`j -Yq%[0 ‡셋ޚPl7";þU`¬ ce0CL v,3I>7SY\[[4~V3Ķ>;2'Ḱu!N"J^VŴ/XD6` t>oOchꞪ6tdTJg ~g6Ea=[Ģ bdL se! i+EX4űx ,K꽕]g?غC˂wbYD@7YlCu7r$ՇD9(ä]HO@YNѩ=H#[r *R]KzAiv<Dž nQ|_y$n$*&:H0DsC3BLs}+kPnic9sOK;vUgVậR$5:.7hX3k&JN$-㜫me"[cұڈ(FtUoH~7"dP?GE@WW]4ܛLOo` :q(waH[:BD5Ǒ~ ePw8a@bgߔY =~V!7*l}` iq~dk<gTN@ēa"?(:p)چ:Iv 9zGja jx0]=gTv"lvS. vfNXM^ /PJb$NCn)ȉIC%`opS6Do(Re[4~])j\(cg@F(Ab߀FODWD==zr 9FK )!Zy ;Tx|6e5~ 8|_?Sg3I@%p-7,4 6D\9уvsaG`sU@vM| !1Lsygzײ:AH&tU*݂@2WVԖ,1ÄPs L&+мHV$[r\m q۵p2Hf2H`O@r fyx/<IE~3,$ Bcv KbF7Ib8kfX|P wN8E#K>=LT1KrŷhQc KIPޏ鹯zng&&i;Sat-S(NMD &Aa42񀞦@$\ևQ[$u{wnu*aDcZPQl6s%sEe纖f0q##DQ.#1פjgm\Aْ¡1Xx8sڸמpNZNۄSshVKWj $ctX&V+hc?lD@ˈc}kGVgx+NU"Xih0,H#1cM66Ԗ`kG,]ZJ ʻUGzXaaI}z\D9=I7 }b5wWY,eBIgĦ Swga> -1DZg;8zލguI3I}'\!sTc(1ñ3_,;*O# Ke\6sުp`pph9dQΥTLL^[ځtLda uQs\R.#hu xZgAFtUe`W ]#Z94T~+/h̪ǀC\(v,sDNPĻpQqG=&Bܓ#qP-ʹ2q%c[cr0z"ΡPz&u.qy+:Zjy  ctɕ KU^ xhb0;EЗ8 <<ckv2:mKxSDAdd"5TqLKzDqSw$uNf)bRW ǡ#pa}䀪WHD?GF֥#iQ}`e0P֑c#q=2cLdT˽_ 39+7Kno wmDCQcNFJ@a}OpPTf(E')(u `; u<w\oLՄ.$gRz}* ٨liNi`ʼnlF-W>¶gd!*XzaYu(l ro&폡R`N2xWTIX~ 6( idiG}3gRȼPvbSYlc3\p췯\p'OW©k\'?\Hw?HU&_PnhZւg>I3D3H lV6f:y!h VttXJejyl?مԡsSĪf A&OY0D*Oټoh9=3xvs48nV+?)\ܪ5yެñM vH5awƍ}ؘP Mj[mWs^/!5xؑ 7mCVS͸~zsKFE%znZ<7ޢ~rMU}/fU]W([n ᬶg[; r9 `^72MA5uۚR76Hb){TD2WsQDGNA:xU2RѦ.9C.`?_|uW_UVw*+Nܞh%:֣(dM:>:~tːkm!PES`ܽNJNund^czQq L^)Uʤǂ&$аP䉆Q<7׃XSWV+0* VZpH<~ R +coܦx2ZNkNvQ*;bG&B3M4\OsSg\זfqX\֮?(ܞvZH VyXƉA~i#:Cm8l~=ۧՙVCKUE0g}p w߼ܹ8ֳқq|A%j%pD3W"J5]-7}!alCݳ4p/VT9O W8s'O{2GO)VWN1Le;c\.K~.exh\?uV3Zݓ)(tthY*R ].Rv,ު aM:=A|i9XЉڬL Q%fsU@fnlg`;޶գv\5cnOLMk|&̚LFYDB:-KdvP,;ݬ=?lHgøj9Ks>Ѡ ub֝\qƥIԖNnh߆Uq6j< ar]gD: wVz?FO()@FBQB;[(A63\ξ@Lg\Ӟf6'HPu=t@R;lPI('pDfJ2}m^i !̈ A `g(:v-BpD>b#Q>h25Tm,7DlB2(-=' Ftcx+4R<~]/wzspCW1nc:mfnd6[[UOt#~@;XfWu:ob,Ф1,ؚt;q@,ʴbEa>лq"V?*cNVTeA4F){'ޣ]R97‟v_)PIX5AVtX{C!3&UWŘ;Ľ! w7n~e/w廤j::?.>]c0/?{~y}O^>{qu_~yqyոd祫˗v_n>ycj=:d mNFpJR(RușQpgW>u%ga63Hy>ˣuK¹sW n"eGH2"?ˏ0ΣR%72'gGB2ZTB =~3a-螜!J4$!\\g=GF/z܀B}Cۖ,OP)t(i3\Уg'l y֖j0NZ C#E7|gȰsqWlc#m>/ LԡxeSLMXZʱʍ>e#(uZku:59ncC_QXWбiOOW|!Ih(jJwMG@gBS8=*m+q_g@S ӥ_tmhCRCFwNr1%l"Û' T: o]y{na=@(Hx@u&emgsbne۾i-q.:jmWYjcq"uj׫DMr@Mݙ1%+tJ=U49+4!jumhG4u|l'P{}ߺ˜T52bkC~L3%Ss2N&Z=̟48$mșZE_n'/OtttX֒ikO.i)_?=6 CcQN@2\p) }=}pIZw 76&91SP˝--|U,v?j_R4W9.ڞGO>y?=5&:Td^rBarpYE9+RDbLTIX'K7SctϜxHPuNUH)8jk_6K `S:MERfF-6ve3Ri~l; ݯ9!& ͦFzAfs"]Y znv<u -z?WlgsMTkBPYg!,6prjA(̒ $d3Ⱥo-\ _h|RcZȩZռL3fMQw$كqJ;G. ƬF-HVw;QY7A8[^C唉 dYu0[t?w8sPg5w׋AaV7lgqkZ15U]t].3U@־r[ W6䄝򄄲l3xWӹb[ gd]$ĔNE9TnwYjw3CuzGMVmuZnG;=6ieug;Zp:{ vNYj nUHnۤQGWۂ{5ou)rb 0jɮgާfOF_DL~s浜{ o߾Tws6-}b o1 0"#gI崙i ^^HnglJч4xN';`s9 5K78 XR&_O+t޺AF e"Bl۽SNju_tC-aCyu7Quf=,dž~vA@nz]0;;F6Wڬ./m%Jʬ+6s4j: )fueYOO4̌V~O$?[FDJc _h49ݝ`ݜlo m:5riݫf'3r5O)8z}PkYEkif;iF qLۂt7 ٠ ƳBC(]Y~ŝk@G5%rQH=FrK30?~sX\>*N%}[U$Ͼ|Ǟ_B8KyD5B>'cNZd8II ˥="r|=i{}(7}|7r?Iw>W.T ItzWR`5)~͢L]t^;Yua]j^I5X!_t0օn%.:nToP,iMĺ%}k.ϟ]nt|u6\YN#~XoVt-+x&uҬ?qO>7eݢ>.s>b N!чJyƺFqYej}B?J!/e%X.9SE|k#PC m%T@fOeF"^-ժpZ:-M;2ΣMLM'C=Ū~ %I d(/ĠC9=bM{78a啔 .Q{GOE>I|AN tK|I 1rz!Gꉿdzh jxsN/`}Xo04b̧U8 {"}k2A׃p4‰AID<풠uRLJFYg c]fY]*L(A!dm#'kop6=.U}E0~(> JkHaOP$L n>*F9;A*҇FBG ,}P%@N{Ta0?OCDa|jy0TJɅ(br!sI+i;bOr~ rX}+ xΞsZds,D,N`v+g>1UAp@_{sqR^\^\_?_\=J շ_E?_wn>rswǛ_n=|7}/.߼?/!q8ʝ^pw/wϗ+WŏK|}7o>ůxq}_OW?<}ۗzzOu/{yC$r`N*FmӢg"هla3%r, U4ԠoH(! >)ݬ*I/np>~ǥ7^"C@MS'O-Ŗ{\`JLqrM-fw|^S"$ zJ9-dТ`E2i>$}Qh:`[)`Opgao)H (XۈU@:P0i(9vByZhrӆC*ljۣ,ho81$]=Cj04ذkdX0dH{ V(y%f>jZc֠}đ;X CܑU:~slU֘>_g8J/7uy3vuY)#I=/cgDɠۧPY>ʁN6VOKdZ6*7a6PМfE .;Nfǧ !mgR<Xݜ?jT v9p)i)8o2!MI&?G-2@$hc17dOC9i@{M&y %ϜOUJO/$d%fb -%n(҇zgߓt3E:1̱ ɣA CQTe'LV!KfٚLzI@c#FNzS!kDMv4+d%筴dA!f:befc]@f&yr @G3 (GR&s% S Crxڿr(Oe,/4e d]B!9 P/5{b6h',P0`s` R˭ e)@l1+nF͋R*8pGtd/q@sRT`EWYaV_0-BmAƿSSRĝۡw,lKJ։勤gkS҂-1_23`4S`qHL8m$20S1b%Q2*LmJRjק5n#J7T[A|0djYų&S+uQJ YXl^yjϾ򴔡yXGQ=KVGH/u O-M,KҭT[?]xyhT4x,MsRw]i^>GZOc_G!Фz[گSU5D=ZZ-[-2񖚉.V* m6$і" jYr8jsb2hCX9Jc5WS`ƺ& hbyQ(m5ܱH=[~RD'),J7pb4:`."^jb/t募 qbn`]V9M/tSW[z65Y(nC)davRe&?w#Nz- @)7-B{Oȁ0-ԞR">2M'P`:K>|7]# G5RGG[(|¥dv=w1ʖPCYi%a1Dxyryaްgo|WԁJ6qJ"{y뒊f&#>:˛M3 \oh7\3G?9n:EmkԮYXqR,ߴY"Du)tdj⬗ZrUmvuIIqc8=qu\d9A4\{Zoh{8@~p]>Zwϩ77޽߾}E}Mz3mq*Oz#)փeܖY )&J#\ua&Nɠ|u`O֒^RDJtR'0<ڷp%v; Ef[cx8V/6Նp 2`Uk ; 4yXE^êjDJțrhPU' 8JeR2ۭ6;>AF;YH@1Vn{Pd}2̷jRM}o4ԘMYE@"p`&W@C@HէhLST+tΰFJ79`+';zMVꠀH"yaś:s@|ReW ,N;&iBD; ?KR&O [~R*J%W²G&[[LbvgS-sbA4:tYB <-`0ųŀ*:lWrdGHUk(k6%`7#o:J[ F5 ]I3 Sn184b!iIC.r -Dgˇz귡]z}Hmޮm=, w=N OUʰSȒk,pfTw#}tzNNyf0$I3lOjbh4f#.g=zR7%<yuΖ6'ayκ=||7%ջJ!Sß)gڇ|N9Ʒw?{J5~ٮ#֥4<ڎ35٩ ]pY JaMƚH|RWJ '4yQ|Q?tVon`q, $Kd[R'iV8( j54gN)EA` i֩EZpC62pb1@`m/̺3Gzr&!Ds[.r. >䱙LC4u[bi25B$!©VBAgj6x :-X@W|4(jf <ˊfpF Mqː;g[w\:< 3jT9 qb.2QAVAձ SkrT^CɈcGsB 6*l曕od&Ew53E3,fXpoftgDzkY%EcڼK{GgAzDkO[{|a2['#pfAyeZr[A'#TavZ}--'7;|TDEeesڅ9Nಿ޼}W|zJmo?~ 7D]~?$EKC'h9E,C bAl\Ohx^&'JEe^O9YOK%dw,~Rpa aDJfDaSQ;E(3=D.uE(N:c# #Ū˘fmx6`uDM_ V"96暶lD%];c3%R&*hb4%YvEFS<"+M @봶ðv  Q]GIp4/Ӹ]%zX0fք :=bm?y်M Ϝ-(i6\~Y #L9@336.@ahьZ3JT*ټ_ GKj qh Wt¦3#x}&YD=Da!$X<=9> z?eGLh@+#.ȑپfIDdꅨK'j2YЙN>5+H-\X9TQiԱ)ф9ka 7 ^B9U %6hzVHt nO'f*MM䠄Zc2>\2ANL,.OZFg}w)c}!!`)^CiƜ+yH9G*kh\Vt͸(55#2WGLDk$6 d8+u`ɰDADYC,I$ɧTNt>GrԂ^@װ$1uN^~n%@QGFEs=UX(D a@_hm'AQaHgsjiez>%x9>F)!DuR sks~R]:o݃e/floIdI"[SȊ=6݇|7/Μgr^ؖGTx^q]D/Ɲ79.;N::-`ZxB`G׍7 E LQV? Å7_!ٜ3;# szv  av$8}!l4A Edyl'~[޶rģ96ݘf6(j#)"Y;Gۍ壟%@RٹjաXvki6J`n Eo' wf8fySm?X, V݁˪rI}{AɻOA[IrCPlmIT tr4oMa2gdc]u!a=j:s7BY{$+:D\yQru,VagR"(>˲`$ !uk^):Y v^G}q]/9ys銶yfR iL(L\u/jNfAv.CԹI@r憳3&)8p!{ e2l`O'zVSkl+ B;p(>fge5VTUM8)lm.dl01?كf~P|[xJ MtF$Y*,=-5xZW-$ԡdžBR"ƘMr;_G*:6,$YhN91ĤeTd:)*,g|} QaZ%7wI@CF} i%uHelv[@&3۩oLh&P6S(240 sπNP[AKxַ'k&QIz\NEF=ز)BX$x/Ӷr"*\S!v-,`K|U E%Xm0UWZ?Q&? c9w{W˘FrXp(BuVl'#n0.[=آ%8f'ۧH,P4 '81[k0 ]#)G\~(OSYƔofBr,s63CTTnC˴4yV'}%3Հ,jV(.C6Y}?bzq:vɣ+1Bڡ%r!S)?<+iu+2("rc8rmerl/&y:w.w*ɂ??MF,;XAUCf36C˖s7E.IIwdKE+5 .QRy[<dHB0v_c\d],C@Tms;>ceBku3"%z%BC&;}Y]EOxqJ  ]\]h,lW]?V'vt 8)"<|뼝j{$R9{m_C8>Rs^*\YgCAt/7(7l!ݠNiKYߠBc$o 7zY dWnжA'e - 9nF_|\'I+oK ⌅W4:~S\ZW>-JH766:~l&I -B-[OʦUX-)V@"U\/-\UBYe|xFڢ?T0vitw `htx?Or҆xCYşpKXDYQ3y 7:QǡMRtl_B(Ĥ# YZlWoePW-!d(} 䙏(BVJ=x iSb#1"$>Vܣ$(I8`ϛJ!iֈ% ]EK K?M_䧂CT(c2c;,L9qgZ4wl _<&9\ckS67zQK$Uwɨ"1hÉ h#'F d"gZ-:M3x0kӁF;B$O*@oK@x>; vr&Bz ` cnEUtla<Rp9Q?Bz~ =T8JH@ Uݮ!KE}.Fi!q %Zw dݤaZP\! 4gdpH#B=qhDLj"fGf?G=k\y zAcgT(%8"!#Uړ0BN7N3Ӝ[PWrn>k V#WxE1+~G F]!l yP\Ӣ=9N;::2\ u+fbkbJAZdzƷw2ig=8[Xb::WB43gOrDWmRS uK~ *5.i !a;}.+Dz-ƞޑ/e_?W^? &~~tzͣgOg_ɿ<+\w_mg?x_^}xݧ﾿ͫ?_7/w?}xot[~|7orWpdKc,~>{cQOTpݿOo|~՛7o?}ݫJ߽~x^}x7o߽Oޝ%+hKyw>~~ݧWoo?y?~W~?>}zts{~??&߼8o~~y1}o^<ڞl ş 2,#: ~N f4O3ɩ$ u$CIb2_frHw=r< R,Vȝ 8fNe1Ip)*ywGnݿppIDtotKʺiDYjds!/@P A]&%F?䙆<'zzI!p!pPPUZJbtbLv쭺f*Nu8w$D" E+}bL;ư~ɬвETC{A|ȷˁ~Wl* xu 0ʌ8y(F$gzXOk!á4+o bNV,䚢 $!dh,)Pn^ Z^;a rrzKU1AAfP@X,3԰p&ƔEv8PE<zY_}!䟃ܰf)spޙj#gݶmӻFo Vn^߃v6\d[}c.xF(T* &q+YI$uR*ty\Y}n߃h9Ϧr}݅ j1bS|n"eDf&X+s|X0l ?'pbJnhb \+}jF+!Ɂ&\uT{cy _X h\k rxoOA(Wut׉V?*4NgXH,ړ}uɥORtV˵Ͷl !S"Q;w5YAL B-B{ׄ=mv9;X TfhH}eg#P c%h/&KjX#Eg%bbTڤžR:\7 IkԪA"AaH"^=1>4\6 ɉ#}J=jwŰǃCM'@ n49&Y6KQ<"'sBeDI&xاGOʟ2J䇿}ǧ>~B"P2'{wO)?9B9}㗗ٳHgJhXN". Qe-L$%PS۞5 *O""l")AIl{]a :^c;yڲlcRKhunІ _q_Ցgat^"16F|Iy|D=8  9 , ȅj-5ܖԎ-7x!hYRjjYnҞi{:;>"d9ȑh )xtY6K.>S%M5PTJP\0M[k0:QUfqvb77 t JՉFM͈&2؁S~˅vM3N&'K$,qK.|79.%PB1$KKZXPnC䶓2\!%534nr$DInxz^ 3wPHBW ݭ -\֤SGeԪgK1:ӗ8GưA1֮ʢDCM1*$ۊkT8&uKCH1Y4..D  @>RoJA," RLJ{nMbZ ,^nb)I JT)s 2r_E4sl s;FύOLv8y00wş4dOf3pB/N}(rH즬{tzti"ABۯ yȏ 3"_L ^fHt!Rg_r?yON4?ſz⌽͐`3n~2$wu_>}귏ǧ$w+{w陟JfX,z0 bMߥnJ%GDAjCEJjHy @6a{V5$+H]ADs=U@ЂxNdx o7 +?IWjlHu CjGs E >aĎ ab vI"c8+kI`TZ}.&y60CşabtijɇDQr6rBI8~m I%rX t ̩q5etPM *än&[傻#!=-<ɁE3ᆰ!Ж 7#VRPA1ߚ#06đ8]lEaGX;?ؠQZy [$AYD]$T@ I75aT߂x NۚC[W־ GKlp6(@ Ayh`(+mu0qv ln!K0؎azsGs ߞe[bheON膊6)IcVQa\ `+d >`%|Q2ykLW67Hhc78u=sJވx&`tK%UCN*ɒjcRSUW jS9T=!(SI!9-PHr,r! {إZe*|0(Y:k). $U7e9P ]d gMJ.er wNqnoǫy*DퟜU=wsV3 uz+ެ6ePP*𴮔/Rȋ:I aA79*-i[ ~ՠBvk'MɤۯKYѡCG-^wTWK8[[Ƿ w5c3p5M ']ncu %axmqc$D>i.]+JrqD/g]UNjKBۋˮe>y9ep*v [#C@/ 7fXő//< *IhB9ˤ[Z͉!HA<5lMsD-$Doρ/§U}ߪRHsfVGӹf Tz;U;,ec83dfyҐw/4+lBTrI@vUd#Tu4\#+ hQ?cP\:kZ[wĢi4\+xB] 8My ̜c;eGmΰeE/0AYG'\[j ۰aq]P[pg$,W \:fP3Ky +b{A}[#Oo1saO%pm.X_yHC>H*t6ҕwNxjP?I~8=b6gS:xfXG)/ t3y/ymJ氻Nܤ=y*::]kWYA7qC\Ef[Lf:_>*ڡF sV_4q.UM"KH#(d~^d>sz*DMH Jۚ4FQ'ԘFy)_޽}/()d% )rkßrtÁX!1" ʶ`s%`TBnCq~V{vo!l2~|dp4z:~wmMՠi9:TjHWhabdl, OWW.최6Cg1=kz\csጨrAHޟ0Г_ ։.a7IKZ"H͒b0#&q|063 [m\4,8 8]Sti],G߫a%=/xsy5" g εS7+;Үf$:/gSY Vь╱(V. boflI7z]wb WUf~br+JWR@Ma;b"^f &bC ^Wo>ە{LgsfKdx];;K6hTIJ)b',2/+I$$8j+𭶡aB-#jݛ9'R}"H#g쮹2,;b -@Q΃aوfa dQ5ducK@I3`odG񫺭L^ldd>DgHY0dH/A#.,}mZwvёqNcVDؒK%^ mԞ JZ^2_T3g0ghҏ˺d,^|UIVF#hs,&Y ױK=Ǚk;\3D"1nVj&!>.voWLROt,=+AEӘ K;e՚*Ix_T aYj2_b-c=ڙf3dR\f{o: Nzzm;AICd$ev(Ө~{>qx͏? Xa@2ÿϞ>}F/J7n޽>{R4?K_?v%男$k_<#)RSdrȢ qCI7j__i EMr)&`C$݌`3"KZ{O84"6U9i8? j= ~%> $f8Д_BVI20k9A %Cujd 7F}fq x5|º7)uB0d*z l sÏOcٜ6ŧ[Z/,H0nE6G@UES+0+amah=D6KW[z D.VMv|} ͥ2G2yM7&oQX걧Bi,ՐDHO;)-qOj,Ak: ҈ODlRHړyͶ`S <V' '2B$]$ p'7DM'Tiދ dC"~;aٓvpC;AARTl苄剈" ^Eȳ A+8&zGZv7aS?xAaµ<)H @(3gYcĢJgVb q 5d3ً.N[ moƔ0): IiMݺ rʢ/ER孊t 6 {[)!GFF 8TͦHI$d"хy\dj|bw,K4C')r47N9RQ)ba"%j7Y&Й&'M@@&q%-ԩu3Ӓh0,Y"8b?tdEN>uJrxwi31]( nQُWEIM4YVpz9 |慧ZkY}L[)6-?J8oagD( GLi`we{1*'C(tdUgӻQE_3N>5+iHQNQJ֒T"+]3)*(-Ӯ覑Y2=e\>Z6bia)ۋdwSިTd " 5HЩStw`HҚlc{VhTv iBmX[aȫ=q 9$ʔƝ*HI#v >Kޚűć" CiҶEj=xIZtUwf mJ3X6| _ePg LPs:{>iOL$ T &P(胈?-٠A6 r%" oXCSs> Y>Wz+r7rcW)O2 ns]= 5l|ZيDtc+[f|pKg6c21V ԱE^ȩ.eYֲӫZJ tMKaON$W/9*4jג! XOƫ-oImf{>^ʊŰ')[4V*~tzr:׷ϣTE:w>K8 vɎ ȊhO63`H `Ĭ#c/<^i_*e!)sBVg$aaI2lG6z5涇N6gby]x^ݟDBጮ0Yp˜u"R~sl^ 0Զ"R٘ERx#WS!oaA:k{dcsZQZ=K-뮪Q0C ɑ[)Eg q_ *fyflSYיv.7S~v?oŌ3AZ U$J񢭼$D8+"1[-RR ] *kpOiuS}&­:b v#kX쎖W>L.-"g^"~sE_>Q;ONC$=(wzKdfpC[K84}gUgb/d IyAc|.BkIL+~lX)Hz~rzd) 6?($ֆgZd ҴR'&QP稪N@Yv(3s!zKpt WfҖi.yc>MRGs+~Taqx,UhI#P9fyM *|:, h;|uuEUrX|Ԉ.ڨlS ZܱZ=dSjc͘AqKQiQ!uݥC-lpU),,07:UJP%&7/˧I[nzh:>|8*rVsV@22?rYH~S(Lo}X&iօ=k7#[n'g+UzIºbNu %HITH jPE{5=F!e]S'jNP5;|a(aW2)pEV'㼘ӯ}7K|Ց!x :4_(K:%bpI֎'_5* u~+e2xnSJ#sdnqވg5i)Ai]i *n豃2MUozA(56j 0f=ؼ*pL.)`vTcbl u.I D!ĖݬRp:{|-}͝ %xz\rAj P;346D;& Zs9=vۻTqےFN9(|(O^Nzj'nrS#qn!szCO&<YI͉>d%JT?a^.# u>{|.  9HRF1!׹EU|J՛іNi-A@tܶDB-K8WL3c{~n8Uhm[+H=a1d#xo!Rz%08CTْC`D| vP#qm"%UH5 ES,3d.❵ `Oli%'㘉 `w]G}IWz\1gS9AqHPڒ%T b2Gb4[. B=:@ Y:қ+ Ub􅀾"Eb_DdhNɹt8:\mV\2Sq̈vTrDz[, mz٤cXqJmR=ިiO蟪aQ>(d` j{ *RhIz1k 1MRFE䢦n "P41H).vMqbMk(A&ǤS*??5% /0$ޒUeOG/uw7Q'/7SZ$B1ox+^Dx lhWZLB'ܬOKTkiYLłxxY+ە4:]L{#V<4:d14Oi$OZ\hز3Ҿl8>QsLTRjFRiH<99ᤑAE u~f4ϋ($j%tzNa8$73-G,s^J)eB{r"IWSٵ>ct/C48|j6H.j+5L\#+\/4J -e+s*c[ >m̰: TB=ƜfI=̪ ;<&$ X=C. SjPA%T AoÚg+s7{fL{FR# 3~EO\B\ǃL:s=6 s ֝: ,3l4d6d{T\Ik&3@q隌߽j9lAE*nDVaݻ0€&c NUhSk_2Y:`"sLf] +VH|kd?{Wb`R#8]QPIZN0Wۯ/N&BJ$+%Pj9?gelPF! hgZa .s):I" 01[s>zdC3ƴhylnm}hJcmy$'=$T9C2% ad+vCNJ6x:`:v<޹#P4xG-Cz|3ŤTۤ#UoÇ6UUy/u F@pxU<$VzHnjv(\`g=blN.+GMj mM87ZT9(uމ>k4l-{ȇBel{LfG0`DT{6ѷU"6FJ!6n UGk^:4QPR@DUI@'E<)HS&+ gNV,FE82,u-`gXrkH_ϼp쥌6h,e lx;<1AA&ωֺz(Nʘ?$uje3L&:' K2MnI%(p?1s;}+T :?y:度嬟BE*2{f\9ȷʹl]u$ hV|hTc nZG}'4(%.GYCgUMdhr^dԙմÞ8er)QZޜdMSO6-aS~tmZ%ϏwG6kjzVwrV)UҦ׹=ޝ|'tg&]ݥ|/"9C&jI FvXUm#Aˎ5lt* bPf׹(O,2< 5K\}xޟhZvT\2%vZڦPsٲTjwÈAi^gͭUϷқUp<ev8E6, ɱNs\Go\Jf-cr%41' Y98+EHM޷Y߉l,WIE{DewX`ME t[]N7!y[hw̧6toM!|b6LBRj,3{}Xdl571JkXr 3 %Hj)@ݰ%ь=R SJl*QVCFeL &d8NW=ax0i!bْ?ᛶ k+:cE-B{ 3lG67 6ډW睲\Z1of^;ҳѺ10Q ʯ/ ;gjsx.\gcpc tf8swX6زq|>+^ ̒Ψx*ycdhl yjk O[Ƶ| O:_AH:ԲN3!}Sto.ץ3i[v ]3)/yeu,'~Hػry,]9B^1 Ͼ28<؟ͅG4dldtP[xIF$%:i`ZQqk3Sxほ!e:lۛEΟ6bh)"Gr=`>vlq^oRj5&TxZoF~wIWilx@x$Z'ᄷܔsAB^KQ#8q$H8eJfR.7N8fD)Rma諮Z.Hm˭KM:,[={q,wo?ݾMK8=|xǛoN^/y~zͫS+h~qer:}w g/N˟~~۷E} ~?-.ۛ=|x{{}>n?כ|߷w_?˯Viۇp5|8~~|E}o&!GGKf4b*FBނM:%E* P.`k n@[C/Pu 8+?P|@<m_ )AMI6 U`ݒM%PNU",87Ǥ m:$*A {×lh^0@h9gqnEnu*=X%}'| -BM<=Ǐ!)8OU/2spБ 2E1A(jef*fmCԒjh4Ū^,ܞvкFAtfv\<} `Cݣ)E0G6acԒM5}})h!@E5|6>iFWPV|q}v+W5h,|sXH[[Y"189\f- h8R))zە;4vnr 驹JH3Pd*'$]XU *?I92'ء|>1&om|ҧ z 'n\~BNsN(&/roǷ-ӕ6VuyטZu룅\D֎D}Y3"ZB+A&YIYuV4X4F|4DMcd3FzT޹i%D6d-pvɸuS8jy^M%tz} ԸI+[@/8 FsjȇcǠc4%\ 1:j * yܡ<Ѷ.mq J? RjJڎH&J,)^>l`H{>{W5ItL= zNbfD%'G! \RUTnc' JlhJ69@}b "wD[=Q_u<j񄣐'MMf ТjcS\eHuJjޢX H"}i7 I,=2&aFǤFse uHߥUU_#휛K@<҈} kT; tbT\ "sȼe/IeHk:v2)]bCub8BRWbg>lzˏ ߧGW֥WyMxu<Ǒ~YҔ~06PMqTE0WckdpJ )UhfG 5I0+SbD=5,YO9%+R U&A!Y ]M?8WT1@cAPVĪ] ;bբROCD[&DOv\ |%EvP 0節\ܖIA,a&e*QbwR6E"׈ c=2d zQ<;:icPD`AIƔYHQSl+SmS*^]̕B5̦ڑ1[7=gS /QԈ06%#5/5omӬp/u5ߗ4V[FQ"v4QE ?iWDU$Qy5l-s֊nGz6#6 Q.,@cA޿Ğ1|i1 bʧ@lK54w Šj $⍊6`MP:_,jL{# /c&s /ZF!OT!?Pٹ q $ED-9#, `Yz)^28 *JF@v(/-W+O+);I<I7\Fqs08.t@%ocpcOxn"]Yrp56Q8U'Ee@n:FVE8 Q .e3lf vrbO?mCτF2#>oQ-}nmmS&!P"7|=?i'O:$rS )AnmFGJJ@K_a}!; BOVQh/d7y 2̍2ŧ$|kA*Z,fCjNJhkd6<+Bkbhn^-@UIv2OPK5 0|xt ,Gy6٧lJUɒl" Q -A2-qߍ*8q:fy3w<nU-ښ Zq%'VẒHک6nPa k *U٦d.ti^MEwwAqC"1Q FLMո''c`o.i8ncsVPY[f!b4 UZ˯sC:tH՛"Pg%tֲ}C rI;[?&Zɻ+DZQb& o즭SwRL7$B2YfQk,s*2YU]T)TH-ž v-+ `gL9o[Xm!l\CO<.FT\ +,Ub|SsեJF,tѯAU n~g[L&%vW 5I$e;+ 8!)z]7V\JqS8R8X5Ef q8m$&}BC[9jt]&vrJ,#6ys.Ć&{Z9Ybۻ \UJLtNM-<&H~wiudQ b&Y7 'i@6AncE8ºXSSԟ6YB(%N}~J9I])u!ŕI&!\ͫw>޼OgS9)9^KuX !fb4+t?ջfqM1ˣ;85e&^@HUfLDP f[d9Z zerA^!]eK5.UjY2(Yl41& rKI@bf1Um9Y']q͂|xiNL-˩EV%(*4Wm ۲AO7jM!gu<3M5,)L;,2y9)#!980n̦h3/HmnBؙ,+<_ٔЍErqYfs&,aT3PLKf3,-$?mĉ25aRR'{I]pQq.MnMbaN2 :7ќvșVY]3rqP 14V]2 ߨF~HZ}( */Tk4ML5G~q9\(yE)h.ה8vې6Ϩ(XA8E\Ҽ:+[,Uk)ܙA9"9Ԭ_ި5naxS!4&mԹP+/xm/!w%fo`eAp2[(q8GB"J`LYWXuΨ1H 9_Vl]@iNEPh`Ce<]c!q t]GZ. jƊ6efژʽIC'aR>wk/ST$1Sk#dN@v6+lP*$Mi=wkб5?^3d';& R5wTk*.pR$\n: JA eޥTR62ڌUDQD֐yzR0<~4z a<+J֍ #չfOBWR+#_" .9 z9PLQ\ĒL1Q+/Wsb4ؕl`ɴ2]H..{r bҋ*1k9NщEkPrxҫ]",kGJؘ:eAdam5:Vϙė]Lfɔjt2U*QjBӨe N֖RI!deҌZd!BNrm E2cj M r-erTRm ׶Jj꠭,hċhjL `]ƻq&u_VbPD撰}ʄgxf^jXKupˍ6^5?ën}χq !約07~ӏr)j{>n^<17?g_>IG ͛y ޽ig29FRE5e!9ښ\-pлx6z" 6B\60sr8'$Ğ ғt*pE;G1I9d?piE~O @ s1yCX'#t{Ρ.y/40wzl?ۃ((H' а8Y[X^U(6V(&BAvVv҂*E\1o%'`SC(j @Џ]#CgiT,;J\л>::u&qn[Af{{SgQkԬ0Ѥyf~16,Uiej^/abX0l4>kET&صTM1hW3wQ't֥Nf;n5O~dk]G&eLY*6*1ZPq]HYk:agakJR3Kf{  L!mO؂*̈́f/au ɬ_R  6ց5D23c@򂛇:& ;f MB*4*4a 2]\I(j)T:Te=ԥLF`^  X۫Cl"Bh:P`zL {ta p$ExH 8n/nðZ@YۖU+"rAt*@I\ U9g@(iOf>Y M i9Xnʾp(&+Z]sJX2ʯ.%Σ8a})xOԹ-abr{'3yݬ7 AjsRmeɜ9op3@:Z?Ui~F1mJy|Q̪nw=VE+⃐h@ t[v Lc Ro܅Љ=2_|%LL*U++h )hc}D.v5n] H6,ٍnR_WSAĭty' (\jfeGż ({Xb0m J=:7)zƱr; Ymj⮞L/]&ŗ#'9 $ l\Jp :m xi%ML؆! 'n&lUk@n18vfρ}fy2B4! l+p:,&E5'[ibKܕ&Ո+\+sf nY!k斵5k`[h]au%?ni P !".a Ʌ?1,*T)S uW9D("2m~P$d J{q0`v6uFҟ"\>2b#BIY˲-Aփf՜SG9 ̦N5Pq,MLw;+&Ca{Ń.RXC@-#ovwÓ'OyY~`m ӷ^\|ǃ֚o>4/g罀 b烔"o>|Z4kcm+H[p9kOa~~ay|ίmW3~/9mٗ$ŹMzʸ .iV|B5 9Wx^p~lYj ȀR+4|20c9<m~nl9t լhpW#OgѳVlvTjM9?2ˇa=E},Oo[cJv-unHI\U eu,Wkqի5Q>9C 'R c N1{mg=8A:,$^8#R/`8[E nm5xSRI;d  >RĀ vaXƨlC.TĊ׹r u9}1{7IL|ϱeq,=fqlu‹I)EƔ +h$ox=}/HJ8T=7%蔡x쀬eT\e:@f11U7-l/!ԆsjIVjH7:vkXӱ̙ퟋLA\\\7PN@COzS=`-!< py;ܑ@bR10|uy $_S.DxM=>*4w̞VbZ~I,[ғe56[$<^Æ\GJenR/0J=oE q]Gsh*&՚tj#dAƄG";Y388_oJ|^Ee`)+KkY`\uq_zvYbR7JQB◭I$^, z}1#Ηͽ|S󃞜;) }L}%AT6υB4 smiUҩKI#_T1JE1ּȞM,eAiZ\EjxϞܰQ;a(r/~/ ^9G0x[8`Ce@φC'ؐ>fKo|]fl95ԈSwcU*zQQ$R,I.fv|)ɕ6ɶ )  !W1N uk=J n D_dA}UlMx#^*]vEw&Kytxi >Z|p)9r.YͰg %sfW٣ȹvcU߲O YN78qE@5l VS7[H9v:c` WeND93IYE8u&j(e(FsHFjTE==gۙ͝,YQwrnxr{I8 sfZ@<z+KR!zYu̮Yj -|:cO Mc\bNe@Ԙ9(k^FV`y?fpU' bsv{&S✯Rq(f*\0l50Nb{Nt7b뫓'ɪ|.N&u8JaF0:a]rt-I?v689I>tbgJ,'e~2qg'c@uzKwO4d"4)+~*B|/TWp+k7ƥJ,󸐯]:OEх0uSQNʬ߸2((/DžD;+p:+jЁ hXX;X< V;`ҍsu~^0:\?5?/ VªVz0\}t~3ߵ e吃FFw5Rd6pfp~Q:طP+^`?.5܎W+ՈlkrMZ_^a )^_7O&Hɋ'/{O>L />W7x7ejw?tN"& [O/^3s͵ 47xK~W_|~xonݽ~&xu?M~ۻW>|xwwU ?ۿI͏~on߼~{yO|3~gg_=|yo?Ow=黿=?O|-*fV@vθ+iJO ,`e((_sMe#)Y6ɿ,髂%tiNVuɃCUrW"Y0i_PWi%]z6$AFJ jӦ,)7ȜLB㬉g"Z o6lw %'5TY21C&! dIzkVl*o˄ 2dK_@?!EJFk+Y'Ҫf=tacatIH!^矴K&^_ie%6c- 0WmHW}DʂLEHHg7.3bOyy:@&LJBOw>~܄[([%őq}AU u[?eM:otGFGe8$:)iiA5l:,l>jc,ˆyk)#,͕j5ƅ}9y5Ses@'h% <e7}%c}Gmm==YmSAf6X ĵUS Yd?-X$7΂@Hg>XS 6qNKӟ^Ci,HxꢁŨL֣7y0=FNj XڂQ ؃eh sZdBsRsA6"/<iRҕ"PFwM}%M$*PPyaK\20q֥N1bT%Kx8Ue| %ކQxGs-f5O5kIf8]}-8jS7bJ14*h1`eG/gᆂbX̀I^KUBNjjf5hLc/aVO֩nF 瘌 g`c bcWnjT_|124@!=#-&7>',U=z!)ѥN #pFFd a<w&Pfe˪rק*ILf*3拂a@麩s `a\]p8&BDӣ7/`fv?ftRe5ʬJQjr^IC\<:\l1‘c^Seo.RtRdzznb5p=74 KJާfڜ}$B#m А?Er"ϹhWA,EX9CIf*H⺪8 &j[S8,8ysQJUjOvtL>nJ{yA(0h@R hAw6@LNTfN[L2m(+93hg K'OB@ :p}pٌQDIIox֔=:΀1FT6z (U6W Z`~Ĵ?`Ӗ9j+yX#m_%GNOOcV DZ ͫ7?ݾke~H%>z6%JşjM#<UUwM|Qw˼j(t8(uq+˘` .ĿxLwfYvAX3=quQ'MұR3p"PX,I5i7PĚӲ tJ3@r( `imu4P7F0IZ w yw]_gW돢SLլ`&p-;ׯ11e? E-/u.FS̄mVpt5vH,ahVdؤMA2EǢWW+i]^"?aihiX9:AM>`n\5SەD e2X>路z xaNA!Q}kaQi (edQQ.s:Hϩp)B͆4qv 59ܬkf%=M+s]z6,˫Tة5ъydb۟rع^pږwW(kA$f9Y*0\JFl>O1+%Bl*-RT].! H(d=qo<>,VLGqNU_ qlAH JaH=Fy WתoiQ`&I gv؂jQ3׹Ҿ&f0vM6(d1ifXj)J961,>Ԡ9V}UVyО}:@0Vzh֥?z+ *Gjŕ2PP~,XSBv7XF`m~gZ<<.(X VYs W, CJ([bSiXl1sk6;,-O[iQ*)!} טHbr$IIGΚXI4]DGAt`Wkt,/8DC܏fH9}ijAPۻB=ؚH<'xW{PI`W>3Cu8FmilSrHIL*.g']>q`pxFfpvj@XD@ ?}T^} @MG1-UVDQi~b@5PiOb-|vQ>_t,4@`'5_GQK:X2B:\%d:^, $ ydG uca >hkd$ ЎlQp]g g $GGj1#-d^ 0idzo\k=t gqiUYSi`Q$ cpHćȏz>Y[JDi\kWW= "Pxc׈WvR]8pW͇}䉺Z=-fǮ4( >3tv9XZЁ[mJ~y`~B⤕>LC3KsKQ.m/lj܁Fhzmu 1CflGgw%˾4IDO~%JW>^ L"f8 İQ[%09_N_1m#̰_AAKRa&|Ӥ8vb#M'z@-0cku/j b2l?z\I+ZŁ3- E \)38]>*vb.Y/E `[W$?8xVZ+̰=-YuDr @ \̊D;A x- 4+xsCd<02Y֒B׫ YINEm` \ho;AB?K!G}tsQ~ >)p__eߎq㚆 Pkn"zNsP msݸ$N6_R7o2.F[_W.eߌ9x_w-m8?~;"ʽ~ l Q{y-KRA M1m N"h`zp!4uD5f.Kv"pVcݭ&Ă$҈;7^l4-W׎lQ52̒N3f& u)aVSRERvg+2ʁh-fPJy1a(V, rE()#+.%g)3q[y+G,:ŮҠ?"uZ^n)- f!Sr|q?`uCͯRbObNviјQ,E1gyCar'q,XdcJ(<(gs%%1薏ݴu"#4d-}Ose` .FuorC1Q1%NBJNdrNȗGsq*\Yu_kx`?J@R [+Ѿ ZB]%%Vcpv3Y5}{4v6EHv`ٙ90I,K X~L(@nB)"qXW=^0W*JmGX6d9fBmIdXX`- 2v(U~ŀ)n1QXՉ{c>;U!|ҟZǹZ˃lN/Ya2U`:F/ 6'/ 9*&>=}R ;m;)9Qu)4`[[<4]{͛ۜ*"V u@ѕdՑ8j T&Y Ԯ:~v\:Fc0XWDDH$JUNKDQGJRĂ00vXUzl4e[U3"BLsfA6p!#>{'CٟK|"4 )?;_nC *Ջ/!V%!e݇V?޼-1ei?WR+>HcmAa6aާ?ϯ~D -/>߱ر٪R\7ŤOrf8x7j64GaDnmߏ~7*T񨸦46G c$*L2 Q.<`UOW&%SGjx]-uXׂv鋺fnuSb&]2ZQ 9)Y22.K/tv,E3E]9QaZ`˭aKP2-Akčr|ZA#lҾ_t#os#ٸѨGpY/7BU7oo\nUUa@j{`Y8FblN۸* ή[ږPk]e8{|J,Ca~=] jh([z]l򵆼j'wQ=6Qa?I`r^I|+H/ouXFQC~H }#}]u-~DZ%&P.Cau6P׷LRSxįJ1ELkMl}p&Wn[UN'/HLŅ< 8ST a@g?8AIoWY>?\[+_0S'D؍ou\z_,Ro b&t)|ȩeC0p}3qU}0PM ~ }C=JZ `'~J`idUN-Hvc]Pc.Xr DY0_F$5 'NuVk+#JZC`aTTUZ+.}0J4u-s :ԶQ}Z"ڏjBE x<99X 3<ʏa},d7O@ dEJA_bm8Nt_3$&q+`U;1L^[tJv %Pc@Ek4tI9R8i+ҝR[jjWI^̚9FG Ib#g0ql ?Wwe6Kp&3,^茽] f>7U J0n xo#.x[Mwևi삭 7w[_-s@CJ4s@x20ejRw1錦7vgnb{kse3GUWtdG+k7ћ-[=-ѐ=LWdl:hZվUђnj9ɂɃZyxA{rYWSS6S'.E\ܸ&zíbR:v[lhmv֚*~NѲ2wH%uY4-Toȸ^d=-F:l}W &(jqC=x3*$GTSLޓdR6=Z^hjZIw n] HR#\ArGcefXD&ZG|ܾAM~PڑX Xk2Tޅ k_kWS/-׎(NgB'*dTmm<TkEhL/G5ZUsb#Vd瓮A k|jB&d 7Xp}fVv i%|Lַ|3F+ԋ'!dUj=Hv^ d[9­H`(\?xݻ~y˷?r%ƄR%A!n!NZ^A;{ο*x)ڨ?_oy~BBpû7AUIb@Ύ%(4 b!$1;utQ8^ݿ ̙a׹% F$\ג& J㋇£hQDVa:` ԌSU\|e4qp}/ղG&Yi[AME+Ρ69Vmf~9 *k2PB)244h!9OB3_JxG]8'(,&[)-i GCU~dEv0 Ιm=- zspͺz ]Dr 9%8p63lHkCej=pb̽P^p0ks d@09j+PTJCY-izpq 㶡a; !皉gܺx)8 %%hMu&8qmY]À> eBI&S@挧5m:qZm+ *.3]Cžpm8&'LO:S 3[0ӫaV]t }NEB#ؾV"ynTldъGsHLA$ ',f)~c}ұmϔ΢K|nz3VK"!*նF)Lj1:qyk!(CH~yKuVRIl/prY߇?/ ` R_hm4 ;E;?W*g;,HDm =?}ZJ_]K)upϰsK@D <܎uͳ.8 KvX\U@9jQ m7o_v $h*#:UKp䷶2 ?Y?" Nnle1)L߈.((^zp$/մum1fNJ25jpmS0rv ْ ;gPSjd֦Pr`T򵀚⡤;:'mt_Uluvh<x2JQl~d_o0VJ{ sNe%5L?-6 5@unh؎܏"> nvќlΏlҽ0bP.Xn\6mZ>G860 `_bpAuK.AvL&/>b\(s&+''P팖zm K7vprsZ:2*q e"J|UkdH$m1Z bR n۴}K)Tk{i *2Sڅ TIklk͊Qf%|(KV+{Af]bncv}9Hl1+WA3Zyw>0Eȏ#nω0wQo7 XZk"Ԯ!6ZtM-C@W]^R\-=R@0'(c3VhXR腝fmVL&_kqLnD7NӰ`.ZCnSZ :$uGUd Mj6d+IڢctMQjT p'13`%mv(Y!wWDoQ046ż NqۻCPt@Km$|Aq+,}m#Sڥ^4.DrvՄf`Hl[;vW1Gg#s=#Q R#Dj*wWc/o,Ygˋ9xI8Ku6uʦt,~Yp:a_~S*]N<{B;K,Ta-V=zs,v`_L>>Lap?~yH8m= ޴d֡7f<|yIHt`뀶tAoJ%2ll>nߒSv.~{ejtq4\O7~ahx;4L>VUx౾Kgg[R I8Io8'zt#6TfH>píTv9`"~ Z۹a%wA\ ;.du 2/ !v :. bH~#5,:ɪi8 -VJ+Mb6,U>G?P%}V礿`B pF6>'Q(.t;_R>֕8(#6龤%ۋ}i6Te5=DEf\mog N DiuTZZpljZ ZW[š(#:Yo`sL/% =%nkLx]7%9Ij_+>lDX\/׿}{.Aw?<~{7__~hP=;٫^>~:], /e|!z|w<|7y7ooǻ>~~>=<~mۻ_o?߻;u#Sn{?Oo?o{͗˟oe燛_ͻtgߜo端o~<_o?uMߏZCHI-ET/PQ.w6A}l($P 6!^G!AO_Hl/ 4_NA,"Tɻ> Ɍו/P6U_p dmfw} *{|^'/#Jk}@ZT]kVv@hx= ]>nTa~xҩ7QD"z&$GH/_@ezplEcd]~)+$)+&I0C%>YJXGt@JɚNA UGnֳπKI8.2\ճSFVBd1]ޢ^4jmU`${$Ժ;rXDUbGխ#*-u 8*O;5#ÊYR@][3rDH -~+0g7=EXӕ! T! L]׬I/^ROCZx5Ta-REKFū'EmUCrU`g.Arl 8TW5aR͒6@*Z_<n]{ʒ J1<;İ9@H<hc[ .vzsP(@ttn}%]`*m(ĐA<%@sb6MQj-= lpN7u+0d@2f]B$;D c;$lP;:4 .+[k(hnTgFJ*7ceVr%V~v[QD2;2ɱU99 *]# ۮO|%D@=5KJY2Փ@܈6zԓOd퓌/x{}Ƨ˓uIyE %bz8snF9O۪F=2KM_cwd`2pAjx(tQ xQ=f'mhtV/e˃;(7]m9 ?GЪ[ȂUW7~.Yy0G,xcc$+0`QfR:6 3Yc,< gȕ0Rx <_@W$a=<ٸ& =$1C3@U! fUhJx`SVThrǐL!i OPc8PX2yf4|XqKA'CІIr^*p?\Yid4H&%KP9P {6fgg]xLfvwŢhm>ܔǫ75}:aYQg믮?^M/W/K! g㟮~t܉~hzE!i/d2KD|٩ G=J(/sl 2983MeI&c9qTGZt6U;~ʞFz'ͅr ,8]pmU$T (f # ~FS"p;Y*.']65PL^6߱۴5, D[joۮ%ksY/ a93&arȹL`l&E*k gjP\d 4_IdBV6Q snvʹՐi\%:C\<A*tĂ 'nk:S|&7 ApG۷0&k}fwzV 2f1ÿ]00\h&Y@/u~s47dYlӑhU4oL3bgbWCHYL8FGrByNhrpx*綥US ߀6[ݤ!;ؤ&2nttyޜ쩮:0cy۲f!S/ܚiT;nJ4=YH=NMblF=Rz԰lG'Fb(lm$kg>҃Q*B O^VdE"$4vyްv0QK֟U!^<쳻%{[Ӗ o;*gHDa#'T1}뙍{W\uJ& 6G`ڱOijۑW\XšO3+Nniz x a`b=GN?a!Gczs Ѷl/#Ǧ@ވ_ Zև6۔{!r;=K|=㽻PI X\hkDB[3XAl$\ ҁZцYzrwD[S|!pBBr~C׍ QDsô`%ba*'VA\Mg# _%> &I+LHCIf˒prCmjc!(z)![9BInJR2'GER%5:Gx1yI"&"ELI)DL X0frDc&_zZp1za~|;bv"=#&Omp߮?|~>}=\}Ac?5H!Fη&K݅P xֶ x(<1z=NhW1n a>8*eaI>p9p#8;jh="Sl.#unXE:ghK]v̓DB>dqTCK{*44`S1׉znL^vqZAa!ДYr{gL.}ĸmCvhIj59^_DE^6{|`Lʑu~`:l|~ /IsH)H-/FAԝVFmHO.K跞h\-*}a^J[::jcqTu5Yh~+iZ`֣)hw!mGmP_QA68fJ(p.'lXy@!R2ɷLjrKXV 6wC퉗fM^aAM ,~|q " 2!9h喼ESkfAq񁗊@knUgs3mΚH~}U%M2a4ڲDʁ @h 39[% eOz|pqJ :Yk![FJC'+PfM6ffּ&c`;Հ 8IҩG86):( MԮeaC R;et!U%+[MhzhzJZ5|hzJS1 >A2FfA ?xOu-ㅊ܅8ܣ<*Oqs:B'){*4y_X_~?w9lR~'o~ Ez "vg5t'yĢÃFAA:mщuru4Lԋadg EsMA+rl-ػwFlIyMCF?.>w?z=o;âH;ڦfb[ߞ Ltx5li^`,٢#L׻umd]SG9QR[,lpݲ/0;ٺ1 nR LHb0#Sm΂9a[z62}mF&YIS鳂}bAC^-pϳEzn/#6r)S>mMFypB !!hT趐@~pBgBY/T;YRdy8Ȳ7v P =v{jF~nw;iHt^XׄjhΉ@[h:r,:Tw(Ѭ-wZ6t9AK)Bh kLԸE/9S%(T" o!FFMP3`&F`F|9iw;Nk)+rЪ]A͆pGM~yz_jޘlIvktLUy8@~7ñg/4 b^N9M!8ۓֶmoJD;S%Cgy43 5J|I^kv*>909Q2iN,!"c9]{dNFVӛyQC8pz!$`uI]d+n^BB@, ֽ4t 9"a]:"_`P_n¥ <_Y΀\ !\rDڵ/}G|9cy^@хΥiiIX!UCcy :z$xdܣ4}9 G)l<ޜSɞS Qv6W3u^3ƙٹq=`$ˑErNkف&,f/ wrd{S)# $Y2Ē 9r@sCqʢK{!֡5#Cc1yfώQ`[l:NN C @,Iڻ͛ EL<ۑ91&_b΍$eix@XEmMSG }\JqKbJZ(18Z \[_xR+*I1vPP9%LJͪN! BŇ$%+C)$Cr!Vȃ~$A膇Xc:,  [fFdY6N¨*J*zeM7W)@G9b;QP&iXAyv CW#G2u;)Y#vF lM]ϭ&A]ܒ0u")gc 7]ϱ+QC^5ܰ΍jUS29[U8ƾ9ZTR]f2jF;,m<ؓW! K`&hC$3$Ѿܚ?JN6u69Agr4,/W??_pV_HƇ gL$`ZzA8'Gr>TfB1co0Z':{~r9C|` hf Տp :3`,Д` OIy#gц2oBbZ5ѫA !]pLL=vLkxL |V(u:L d$9Gmc$\0_v6ts2!i$z6,Rsdžd@ }=v8/5=Z1~}% R^& jV*!*QlXC #MÒ{0F#Ӱ̌>ˆ:qЦ!5`)U *"1 $\2 ice%Mzv2d}(F"P %׆pc,5LN!_^2+&!_ \k907LKU0 K18sj4 0Cb}dJ d6\aĘ6h[Vl N\MKۓ^nc2"ÊtZ<.bU@q:%A!f C!Y-Vx0 .1 tZh+mRyP= dQ3@Yrp/YÚ[YkK#!(7êr.|?Q&N֊ 0֊{s2q!gSxy`r1I(La8,WD VuѶ@[6*_q<Ε[I@dC&9s9~b`֖?,w,$$pJ%94pM}^ y*ҡggX^~\²+E-I~pEΙpg EO/@(":(g'20]EAx?Wgn2Q!VNI#" \/3Wς*Y .UU:2բӚ@ 5V06C0{s`몚^2[̶gfSodt}7s [-bo2e9=|:sgOa:-^κ8Sp&QGF`"YsI{s7)uZf3.kv[:lj)O`mݤ5|s ;z 0,dᙠYR&̅2[3ixV.UЕl->त8ޛڠ!NXi:}:[f*]b̖fEҐ9\5г1C!qj4h<yvȳk#_]=~:+8_\ {'|=ěӧCق1rހ-)%2>+_< v5vQI=#X<J2"pesY+##%X[ѶWa6hxiX]) +ܩς7Dt'fQ#嶨T!yNw}TF-ޗ/o4[5Y|~! /g!0v2hR5O%uтE1CT8ZfZ۷#0)*-BXM*SS#k~/;T1UΕ`kTעF[Ss]F5QS=vKܘ*d?'>:ώVDQEΎ?d>ԨŜpSR7x,m^KyGP@aq8?4Q`$lhִnRA54agC [h7V/9sry!LH.\S:^g79Ry7=9MAXq3mawy Yb:uܙ$ӋXC.u+K0ʸg5KuE5=PWϜW -v"r Hv~ƓMf 0jy,DN.Aof6:E?>7׷w}O7o|mFFE6gµ"9}~/ҧ=(t셌~l!^:LNo_n}q޽}pq0܇u8V $94Ӄ< *sK>+|)4؝zנ4l^'lۿ6"XW} JD4Т ̠OyB.&  vTM^`.+X+L:<2`meLs? jr#67ZLi]{ڛ&;{$W0QY5Lb3fHL/NR,ėm_RM[k:4M}aM8deLԃ 9B?F`.\uӏ6kmLU&jiUb!(5܈vA,Yؽfiz$Ҟ7b*(ȁQdr8lMP_ch_+7B! N SyR"VJ voTbB2r̒L$.;BCn5}iGg0u'/R=-yq{KWSK_sbȸqnq]*nfĉ?Ҟe'<|Y7'',i딁\]'ӴNgO]`gO<:3 :3y{M{ \l>FXga2-aϯ 3kٮx EA48VtSR; >^x}BaW:>@mOI9;DA quk Φ7ñ@F#dc:(ܟσ- bA"C^Ԉ67| 7,m<JnGYy=yt|qϏ=_]}TnRʻ2ՏO%c??>zzs÷]w浿<;ë?y&x~/oכS뫇w C'q_~X𗫇׿-ᇟ7=|/t>O~|w{77ooû-^ǿ}_ݧ_>y~|x?~[8}O?ϫO/ï_-M{1Q>;htMZ,亭gZ!RdN:1Ry+/ye^ E&Uzg62+VIk`cidee[E76U][8;1E5ML=Eh5ɮhXPCYhϸVa5rO")Ni@铭rQ9V C:bP|FMP-Z]mLUvyа'^{jhH?;rs=d{$Wqio6"0BBU#8|ˎƨ9 vZFh;;0xAt"4ff9 / Ak+TPTG=V;j06~:ّ:2Q(jx)9lDmPl䖻! l_ q۾CVN'ۭkM"fjv<EsA&465K#'<ESR%JĪ"^zq{#ͯov}#~jDzApHbcNc8ߟvňWa) 5~FnWG\!-V Tca,27DX94(!= W0q.1 4L}ЇJFEYFe6#(՞Bgٰ㽄kX8d-Ȃ}yܓl<{jE~*pSuNn8f&'FQ`4, Qa5?U 1MFw1Wp(x tvAt{Yr]CXz|]bgaA#0HF}x$ƌ|HIsخ(HS#Qnn*j`s걾_:,]5F 0ʎ52_Dzi>D M42A/IP潤;  9]8|*{A;Hy~ <=r5m)$ARkv􂞋7xO1< -ܯ-╶=yf,P3XDIq~œd+ֽ'3 Ԅvv{$BCC[ 񨮁9-(A]?$jcR(P$7zw''<yu%F; 6`•}~C'_crGK_pgw1-!ॡ|v:';ޢ7m#GImgM ܀T' 6Mn.ZxXlɀ`A qMmv UOI\ g8c)ii“.BH td6c#ؤ2>7|V[gIZN$uM/.9M߇. /Žf #E<.p-$x\F79osrӷb {‰Bw!M|_A~tfy")~JLGۅHp"< / |fm(3'9-tOF%h >8Gu !o03b Ol.CΦ!c K'/d{z۴čB>Y!'0&|/(&HQ@ޤ 9 ;@99(]fIDu#Q0F$|esq:A?ry`S2vvkaMQ$@nUBn#S;aawMPM@g-tGX8II|&yb,=6HoԛgD0mqרt!vWm#x:%`8ɖFm0VHYbR e@Ls CZ&0cjp.@IC 7.B a$g&/g%+]nWŬJaӰ1lx46*VTMBġ(Pt"fܝgL&kCUͶ*"!`̪dI%`ã( 5X )4:p -nӕBJ@`NDp{LRbMGƈHEEJgpFgY1!ߠ} @rS$*!Ey( -9u~0 4[By#Ǥګ{iolwBc'{}{ъ!i{}t H㌢ةr(N_zGJnOIVj&g (fH7 <.y`H3mؾuw3vgY*'Qދԛ i=Q0ay/ffq46ҮW2^} [ѹh+&&b.N(_&/Lw}i87/.y8e$LnP$ѶCET^W5b- ҕc4ЇiWPGqؗ 0sZ&]1%vd5Ar,#qAqHY5h=M*cȴ AW4ڸD1XDRσ| RuΨR HۈL#iV|8 jT,=ˢ99AT!@!>U١" Wqۤ=ObPr>y߫5pX/j{8& Y!{nhDMsVRJ\d*a kIC2=wܫ|T qMٓwoԖ 2vC2âQ'%bPĬ4,@smp*JHpK>lN:prL,W0Q47k),omK4Pp&3k#JlD]-X͉{219tTU2|jV0*{R-]7\.=:ڎj\}s}7Y{1RAp׉4FmxXmUU"fd7GM`;4tM4mSf:tJ bqbԙ(x1q{*bo $9\r'KfW__cʽr.?_p.AH(\_/7OM8M&V|wǻ '<52) TMk h:bsCp??G> R+BA_@IcJ!dyLo(=S5u=Ʒ Uw1X`$E4I)Ah4Q~hc#&z_lQ_SoM׍Wd7 *gP,; J㶽5\*VN@& <^{'KL۔%/d鬫/xf% aesk_9:ꓧ7ܒ`PӄE٩_n>DљD~/1QDvmٸƼjVW-9:X^9g0W.gM@ | z Q>rc|dܟnUUše8-@u@5[\%*|Gq+\O`%VIYo1`*_Q~*p*x:Ei+Ff$K~PA?7( 6k=%YB'F%P kY*h/ *ajqi/35U:H袄 eMt/\aMS/\F~u:C5 `qkVwZ >n`{>KtAX1(%TP &`tG SH@&`32';4n<lJR5PaJ P8%Dt1tj;&,XW%J'S3b&wr()Z UݰruǕ5UCX4Khl>VPNlΝ;4!E4l 0 aCgZy j*N`+¥T1#Wrj']G ՜{:oL qX@UյPΡ&\ 4FÚ~SdFP_ڈpcUE=@9b|v$]_m쪊$\,n[' RVi5byڙuT/8[5骨ԒZEy&PU6KPJ^{8a>Goon_ Bmg%Ӗ4*03]3}e΂YYq)it\MSE9+ˌ)c e|ѕAAs\*{Д ۫zn"|<ĖeJeT. 2V7]8ұ?8׹F6A%b5 X3b$MRlR$"(MP\~=z89uw}/lh-'4Pf7qŸᯞ)_?  ϾByIWM6)Z7\])l[]kւ->FH2RIpj~E"ڔTy%˪S@ M򈫘lۮ"77|W:˩9pM T|.dd䋚<83A+pj_WnJlbao` nFb]2B*UxxZ Lv&+NfISԊdٮJ8/A4սƗk/kCdyd1Sٯ2KD1Ұ)ca]) 1UulŕS߽4ճ@lnR,V8R(T')<| *\҅&T#8 EϦX$YN)]f4ftDjJBIОGm)ꍜezL f$b,6R4 Q]bP $:2p?%2VlJ($.R/)^с..IUFrGrlWNF4vYQx"}{IdsnO{KAAȌZ6%+qOB4Z 3HPhITIYk dtʴY?%H[naRҌ@-M:3wk䖺sGET:yט4Tyr0Y5Z&STM&VYcߓB.ѧ=G@BFTxR.rbQiB䭾G1EL c%&}xܡP z\"MÅX)]{dRQ2aYWrcSCN 3M$F@NVYaNrG%\(*@N'K 07'DLsfgr6f3X6 [dYe<2HxvH^|<~*L)1{A͔=1a0Mps9)h6VRr)W9aH-]eencخrBHS1- gE]9̪ژAp3kj]栀'KhˢdM1<܀[ P9@HlѲHSV(Wu$(9hYuiN8O!/]qW`F..Ś4Q]N\uEZTA2(L,Ax`OlFif`Q'q``&Nv[ lN.jǩnzXSNZI(U uy=7IYmqsVe=ڹ\-g`)4oD$7rNo ZYq"'.xZm;˖<ݾ{o ow_Ehz5,ѷ4xʦa_kxJF$SA4HLp'JqL*z5QF1ɓQ=ui8#fJ[Ŧ<Z$Wu$~JZϟx|XK!#? 8"TW5愽Ԑu!CQ6W¹7-ƴ P<RY}:2HX5e9@iR4dX}J7Ƀij19rMij%]Ԇ㈏sG5y<&5q JԌ_ɀaHsa%\_@n>Y,"Tϛ5L\" h^YrWPsd-?͟n RM4IZI%+yvrFՊl1{9ܟWRWY84^e=ϔ,F)_Xrt\HrJs`ў;^fePbQW娋R522062̧gS<5UțLUْ_ >' qAgR]ɾvULz 2sJSfy \>qK084TC]YlPX,a>G<*XrDPBBQ1/w5dIjhc/wo G^96˅\~ 8^*}{ҘxpOasn_>o틗/WFW:J+8__ ^P񟳱XEC %UE) |H*Pi$UҐTX).(|vJINj5e2<+m rŁ~ oύ2CЙa 4bIU5uvFu="4ìnQLi]g 5D;?';߳K4 Vq:xI|4qnSrfNbPJt2Wh M|dov"R~`=8E$düߘLOaqRFا :iHJZ2N[d>=*ǩAL*QWaUXbEư4#2\9*, 7ﱔ(Fk5"pS濝6':d?&0QG(8| M]A}L&8W G6iH`he,`Hqq6$cY={i$*՛f1 `>Y{ JDcAϥk,tKnS`5 6w cldˑ%lk 2XzYZBtIP 7c Q sIGUtIhfTe zmGr <( wQy\.H%-1$6>Q(." PZléQ~3tx@'F$rҖ E)Q=@"ܮL8D" 7Pҩ*>iG:z E tcJkI˘,R16ȥ}:osx=V}e-S$2Ϩ=HsՆy>jR63;_-)&<!\<%E"x-I'Zzddhl7bZKchdW|)J RD2g. lBbV&is>P SVtco:-bhO561go{[fq|R;raۚRyloa46][['#qU<B$?#V4$RbqUqp&XwJHO%O _p=K!R5ZǵVV}% W:7[بaCOLT$5νW]=+?]Y 3YWGQOɢvhVu{؁f΢xVse\+kt0c:nmXϑ[uPӌ4{© r*tnY=1C<w|Y̩H7Ӣ9.}#Lvc9J=4X~Osw39EگN'̏s?P:H-zB!4NirNch8JjM*ũ#բGt@PwjK'FiAK+@T5|&@T{ON`U?{)]B&TmHCm9mupq&UV,c;F,z2ן4%f~[ *;OMT=XdYL2ỹgɲߞoi~c˃lzbNjdfpB-쏣J`Z I)AЃabj-2zf"wn7ߒWc}5T{s6PsHT1PԦj8>bD6ASKDڂXu20NkJ6á@LHFK$LN:tcveQ 'uALJ hP̿?F$]VW\US\P@FTәǮ>oyI& i^[Yo+Iyp($"P(v*#Й1#3GF$&a3zZG6Q$et\+ɚ>bS>5⁀9zUh @o _NiR(؎.*ISĉzhA@{&ӛo?]盏?=co?_9wgByx_>#ū/7?o>&?߽~_>}? ~~@9 /_<{wL_~~˻OOUyn_o5rՋη_+W}jۗW~+gg.g.f,؋,ta>_ *?GJ"*ahd;7wj+PWf1xxufΖ5sgwoj3uѠݎF <ƆOiف3+q~?´^KIf)IЖrU&!g֡ʘ*0e>H͋\%>lCs?MY?LL+?=piSE.ZM>+O3\-hmHCM"H)?@ I+"m0HtSlTaA߃ ǧX ەR$7$oE<ۤwzXG0o4sz :5(cZ e4.NMT! TSkmߜm@IY G(2)lesdyFRr2FfJGX`ac4Y"*&:€8Y`7}ke}DӆAtG-wdA|Z"%Av8rwD:'d2>` * EBoJ38L̙`%DB9QQ5ͼKO"x!R&~gDxk9ư~_)",lIߋ`ɴMN[$C淰ƔaNpLAZDSk3NF+~0zvVP|l^-]2ŃQI9/<;[3FL뢈^% /<*8-Z%@Q8^ttTs7<z|)zzTrX)5 sbQi\7+0Qi/}|~iۚ${4>M#҈XFQ,8sRu7,Ѻuarps. aRcAaᲫݣXFf>H7i 9|Cj Hں zOk,Z-bg2T[솩Pt":(:Vb֐?{m1ѽf01±`U.2wtA?tyJ`Lc7w(GF;FL 9YÓ^p3,bwp%ҜܦRwO_\6:; w%x/~.vdnxx)bx&ŋz*B .aE#\#bciY]A 3Lq \E5r՜81D?>]&j3j]&,M`9;K,ZW0r1lOXkHL6`W Wks(Nnpv 4LgQ\ v>Ӧ*)OK[se眺HPB )H!hx +xg| t&/Cb|7yҽPBz 0U 6:%e-`V-Py<ŅNGGIwѹ ċɶӓUTo{5h S BcW rlC#h9`߫9I"dOC~`)iD}QlH*p$!N%t^D1&i2QfLP5S_@PN;K0Gʁ J 0U.! 2ˆ:ȶ,`=꺁$z0Mԓ1=󻇟ןayu/}~03ް}읇mI6^=t>NϷM_uV;Kײ=s.mVSqp߸t!qݛ<^B4-S@i{{(r<==G} [Hv,b{{8 .y>9rml/8/&1h̞E7~qYn3@տ"qa/E' Z[9yќ{L=rc{s4+=eo==HT=x;( Ҁ-C 18_L ~)+c=ܬ+xq)=4iۘd,ߵ1_._Kdo>=L1 Vceo1\tv?q{8zɿ #m'rIOq;f{3}y wڇ8KO>4x|tݞOo܏=Row8ב'.ث{bB7Y-CrQ=h˾X\%m{p=˅%әjI>x~no3%o_obGnx»ۋVyve@# i={(j=3߻;b3C_ɞc\\.6{0w:g.rh2c! ῜83BC{Yy/VJ>YOs9p,=Ltȋ)8(y/m|_nq+=%ޚ I}w.I֔?οӳ,ΕN)7do'ه;ra`MΧ&\{wکĪpy*5O@Pe XKӐF)d]WFT6&TXc\w~|wO~|F׾۾JG{LT^ʠ*ty.ȕtv @m)Ey)mON7O7>s)VЍ?iGJvĪ:jR+v22%\SG4GJh*$re+ :tϊXۇ/`E:}C=wm/22]L9@) 5hp Rͮ{{Ilb iLqOKPZYBť 5&SYuprqT8U"]H"BhsH} ̹?Jdv/5A2WhhW.;;"-*'z !)z奎9(?P% 3euRPwjUݚXU\"UdPqpc`%/9qdO.R ~N2z!Ϋ,:t\my\{uX`(,BWOҷd8/o8/5 r](ǒ_AzdQ$Eܘ)ťDZ%2p,Ȳ:˚$=X1<ʃ#&>LIǗ0ѐzGtpJwS¬L,Lg1f$hU#Q&gHAD2.J Q%*/qY*G`%>~4ooC %;HJdP r8(bR]6]f6XH )jiFe,WBDcLD#o=Pr1Wl.SB!O'LK#$l\ Z*vK^Sf0zb_tS<ƕO$~JϤ`, z, >선25MɃP*ѯW}4~5+yC>/zI}TXZFKDc&u| )wI@ 67 [eEgK}Jn)y'dyH6XxAhs(=jU(ޢڂh5ꃝWU ەubt*FFk.7'LXdc?z)je~zZ g3(eS9M-c kgr"fhzfmJ&7-4E.c%L"Ze(]` 2 bf4'1BR$/Pԗ1(pw&⏔8نJ@ȄaY0&DK"D6 A]s.E% (5yiDFGeqL8 S0LY"~*kEI$eSED+II*Z8&ǚC5K]DƁvT$ bp̡j Ml ˤ!#;.)+Y {^icn ,ó:;˖@3SY*7T9ny4l ]7IN*0-*;,L9*rY칚4x-TgJ#@B'–<ԔCʭ Ӝ*x, T7ņSQԬjnY@MSu?I+zpOιQ1ZiPME5v9/Qh6HQe׃VIg*[fMB5(Y)섵W f4IɃ"$D:CaЮ!D6yd>OEW혺IqN\%cQoF;^Ut۩U7&^"`ƻ%'I꿻BЌq I OTDO0'#!-$9oz` dV 5QtI8n!jyT>&+dTk[DTXi[6sLGr-ylh>.=kn ,$ؾdqؼ>_ 25l-;=(U !1 dm>VW/ мF#`+vSUpok|}TsOͣbHAhԨ* 쩅^& K{mM1_XH0 2 +:2't6wXX٠ ׂ B^4`X:XDP4Fx[NkH$ǹTi 3(l((;Ѳ Hk7=RR$vU3iōAw;/ظ˘҃j1b4, 2P =r9@eƒ"˺茒.%H1l: qCLS!&m:H/ؖ\yJiyC&Lp`-@HVpkj(kz op*JyX*JE8Udv{F.G, ]8HdΨ.1 `C}C,50GK| @ 4ViҔ)#HE$ßb8AځaZpVaE%@ 1h$ŋyr&m$~N"А75A{13 tE;jZZ.=G 'dgQE1,A~݃A$5"1ijE*񑐱E%1G CV]H7}hC~*Ɏ GR`L63i.~md$k_% F;f O!r\I1ʐC"`%ɪwE fefP(07m d;3J&Mf4$iQc6Bz} M @`t@d4`XfCt`QE(B|a [-WDDI. d5Mepa(lhlcybDXXo_tB3@1E} !Y{4eT0+{V :>Ȣ5TjxPv]+3];nV}S4w+ 3uA-&o1]_2] % ȄA?$ 2}~03u0 b֞7CjȸoTtgUH V-AgxDLNG-{y`)W܎ : M3B+|@ob 4!  R V ET/|f*`l ARu s 0TyŤoad@5I' TV&g&bXş`GHYWY? *D!ˁ>hdC7ea~b2XTZ^m~#4\8y{ZBC#][o7~ӺSV؊&q̣!8ڌG,Oy"ٲTN+\,bWr߹PCWݗRZ<)Yy܍3@Y h~l 5r6;-xf`1K_G`)?v _h緳BOϦ2ZtO;k+mia:,QǯaN;9 4kM_pȋgb(Ǽ/үOí:?(wzNOs;')LScf oe:LߵFk?kYhmXcfG$n.l(qyL M_(lwZã44oˇd=DDU!o&/Ҙ |$R!T:=7ƶ=~A5׃ DT3KYOM;8 hbMBE>Ծ 1#~[bi,pvpVh@P K z[]@*5ݤb–x n{40 `Γ?E/D:`TϣA mmP.1l^ DYQzW8\FTN9)f-7Hvtْq ؖ!Vp' mK͒&ì1Í6 뻫{w&gٕ?x.b7 _?zj߮?^}ˋ7Wo__QLo6ix?}O~yW3tk1WP._|͸ݿ?}%ox_W?t{ֻOˏ?^7oovѻ]ڑ__cׯ/}Wz>|ͧi.0}3|=6~י!cKg1I83a9<{K1*rP4K9^Ȧv[ /!Q03jAцжrv? [4n25t6e5g0ߴ7 m# Ϊ8k-v2D((fd ɳNg5  q-Ұe (`w4-'Z /$: #aQcRiDsok'EmJc~IXUXmͶH`>$pU( ǝ>,Ţ4R 7 s{aSIB8aOaVFz?d 3NSmyxF&Z׸iX >T-70֦,r(^נw v: d&Bnbɰ bpPBXA -DcElLN{m{0܎3dǨbfbf"f8/H%fșeE Jx2#4^ I}):DV1Pf biύ-iS6eP)!JdmaYSɍ Z3b,3bBDV"̢{E`ʆA5L(ᨚ=aT_A`XwlJ5^6L|u%8LX$唪1 nl`)TL fK;V w(A<7܀RVXZ] 0m >@/V>0TSW6$T 3B&y/mTT:2`!f)UQ2{yGos @iuMho{!&Co3:_Ű[b^2V=.GޞO7=.N:Ri,vǨ\`Ѱg v gg2( j)㧰gPBR&А=S̑ʯiX@4( _?f3t@h}ŋGt7Xhtb߳lZ7Onr_ޤRҮ*[gbq\`Nt kt#[jj5)*rYN uظ3_3SDS֞ 9(!, O>X㣅gVTu$}]lF)b.أ2,>R,9<%!㑛bh R@:FOI5TVm8 =$ڇy;PPO^Ȼ%d>YJbc0j O(\g뼱  Wyv@ѐm$0SYTr{%3֑%b5&@OPZZBX]IN/dvbajJg*,;(?Ni|1@#YC Lv,sG@<i_,ueR=2$ڹXd4Z]aa5I mٛ!#~ _ذ\؏;x\$^^i:-O*!E>lD06q2A҇O"=l7}Q$oHúa=tXk%&NP_2u.ptBmx1?Ohŏ%4 .6ڊ[[;NԁT X]CdU=eG/9M]Ȩ!eSgOڐ.x̸ѵlxxjF&Fq)ïD2-2ůKy \NGAqE>Bn TmK&6zRj]Rҹ[(GǴ FV﯍,Ɏ#6lTvㄍ Y%a.aUE}Z$;XuHXgmdk|Lsk;tSA5SwvG#޾+yn4?,E`KcE]ֻPX&Wj w[MAJ1k7"]r䀒SQ][l3*H7SV&8NNp5tЇ3`vSt@TXhsMLHa{+-^-a ں/W>O= :%<0p_ ,RÍ?R- Uc4aE)i}]z)%B'ގ2D[g /T`jM6_:]5bJiy#r{swydvȭ ^ʜc,W!t㞸rA~@cIUJUUܸ^*=?PY w1'Ж,\in|T' =P7dTP[-;A^dgPm+f 5d9|XgUCle> ^{z,Kœ!S,}=q9]18`o$rۦ(@'8d j; rD Ҙ.0,I,b0 .ؖ{j lQ}`;Lv"w9XODjQ'6uUA4?˄m|n{PGU q6h}~n<?熧G 93.APXV7S{V.d:A/zjϹ Mava} ktl {ZL!CiSlMl [? l/;Z¾жM?m۹1*v!/D$M N(9y''JG$Ƕe))V=/Y;?"="ݔ}o~pW~yA}QYPw?' w PFiamQ[JgwȘ,*93;GKm+)LQSX=Z/Ίmp<1r*.pmZi%֪w֤HbV6p(*pS)l{#9q\ ozV5iqNᒮpGkouFzoHxkUl4)MHcrD42hC%+^&w= uz gۂLJz b:$pQ3HÛd`AIuIsH'!oA=I4pm=.)i^@d"8r9iX}2~o/|r%[^DYQ YS4eËn DAs#9)Rٟ]IԄ^ZYYvJ`h$>>3< bpgK?-o@f9cR@YaAOfX= ylwGqp8}k IӁUY蒴(Rц5J=1r֢5ؐ啤8{7.̐iSE39!i#{!(Cr [HH,e ,3Z5,,dL6.?g^9-<ާ? >dWP!klL*-G}\|B+8>3,7O;]ѳ[Ub $mTc'^fBU۞wgp|ɴҎ!t`7u 3s,nlU~q6İ|"$}0~]ToIeHˇo 7rqy5K2E<;{v^?;{3泳>'~/wח7o勗g^߽;xYxusU^ .o_]ؿ㯟߾q_^ }q]o?oNcNģDyӿ/?7ooon.ߖ>\?n_[_xuq}smC}>)O緗w.>\]=ݟūg7Ͼ}^.o^/|vjwξ,|U}W/_sww?}/?__s ˹I:"|-w6k]vOvWXM(0ݒOl'd30 vϦrVfaؚ7,$*~Kb3ϠYe>ՙf(˸?2-xOfli=;Ԧ> oYjfU͎^ X7ᇭX T~HjkYzy) vM}۸'@nHΧ(/NB'|OVWBlTv53:̎M B6L<4%Fc& r5]@ =Gx]YLv>#J浨aQe1^ц  ƺ76ij:rt/L0N聯Xn؃~ .:='6 C:vk\%_ ^x>e~wJs\$ŊlUtttӼ H@crpE z!kldNJjʚ6<44K:Ox۱]0x0:Mgz!Cy7~HHd<9cF"&AsU7)vx=,Z10 $r;#"&ZGD +˾|la\nZty<-xq71GYx2Yu+>Md£[rWHV}8N F&YD-US([ǍW/1KQ"]%\G **vhxYjRl| &\_:ks2(!ۋ/YzeN Y<2=gpP}wDod:wW^X/ 9{is& Ii8TG*Vڱf٪,90-f3 ViS}P]`aΤ]@j^ 41*gkYha]IeМ7@yTU < 8$.&R9FlhAl1i1[vp~zȂVBmz1ւUJ/ui#;,={`UG[giyVUq1L\Da#8I~yׅ͜Xpz$R )BH:5x&C p˴P<=e’ mށ(?&|٠߽QO7КcjmsfQG`A a%õ={ߍNB/" K٬!ȝe1ZE Xws*y2`?h"Lg*P! M+;&垍RaE. s|f/JTL9H =Pm:|UV];iH=5INH3(߃T@缂8~UF۫~|/96Z4xsĪ#=+r8_-˳e ʌ]82Jr+v`dd$vi bZNQ7zԛ*mȀ敎d}emQ]CTcY33R-ьyvS=6CU=Z"m .,Dp ؏x?jD18oaK%=GB}ᏧXB coBoxK0ɅIM  n+[467 2`' $ 8˥P(?ؖjb \+`2Hf߽`33Ye0t)\Zc_jS<˱3:Qk[sh7\;B b;):'2`+F?PǢmfKko/ǫ7rm-kE -[ NtEƚ>HЪG,$DG]O>%b4m_&I#&O#UN{A@+j`ܭ&/0,[>H\iDV)J{Ssxkw iMĎV*܋qW}w0ľ&|rlG-I%e>z<}@JX?5em&FAd6KDžu3%y;CRz Մ*ӶGE9yh2 ;S(˱߅cAB\04=wP( ]^Z$gsuo2ÕdpvSA.BU riX[+|ycڮ^ȠcJ"ZxPXt.7QYq0qC GN2rGGm7]W shyZ6|8/Eb8~9V|2713S8׉xYG~zsӇ?]=\|{Qi apV |!uሬ5Wja5Τ^R!YX{WPU#V_ l-sOV(WfNatڕR?gzv?B$Т ڈEŴTSpO&K=$vHk%AY**8F-Q05"7Rjil7*l@fPXkF֖ DKQ+c(Mp1Ƶ=0ꄩA6E-`q |OP =bB [u\sP8ayQƖ8#0eWC(ىQցxmiH Ȃ$vaT4jc1`XTg3gN""}a!o(Ka!4Fupe4ޣ{mG-Z@Ε}ڹ4gxOx֒CZ^f`?ac 2i v$ZlYdJGf0‚2~}X%{\s*[ 瀬MeG0()UJmo"Wo%GA4~(i62-Վl UoVFHtapMܱv\u1xldi_ԡf188Ů*Fe%S\q˽8]J `m[@Ơb/p `$l`k'9o`sحAG:p~%bf|-tv\=ӢCݩ]~7\'n~oGpi7EB{EvӉGQ,  56(v3]Ԩ{@)V& 49!ٳakCzv5TD)mS6SnAY%mE=n" j<꼠(o2R.:uTu֛mv'5y=Kw~lu133J01.Ω~,zl/%D0kMZF瞴 B1pecTAegxq ӰZ{? ]6ޅ/PV|@sO4160\Mj4>r Q-40XWPi$s=jp0ρ%eXlH~#^v,$R,Q9A+){(h[vK ɃX2J'ǧHhi8P*tL^ix`'Έ31+8sn1H 8*|g"ƿäKɏje$j{ $ԻR.k6۸ӣ":X[z|E! !804lb`J($:}8Q ]agym1Qj=*i0"+4?th3Йۍ"hoijRG֦Xp`*E4Q1D8lB'bw Xc C}$y-["j{e[wijƈdX3%HŨҲlִdhL;oC'螢.1ܤpxZzPY.! $y~_~uj)[(q)>{~wO?k(ۿ"\_}xwpo1;ѓګzK745V#2@ ].)L$1|vc(JKϝxL -HءTe4r)&怯;N8lhv Uϣ]Txٲ v\&kA E_vaV mzT%֘pҊ]G}f ؂&BI6g}XTpYpFɣeNUHeW[2Hs놰yY1c5ctևUAJҼZ5 Z#l(5]$BA&y00.2:bh ; =7+=&:|zN#)L]іÞ8ȀeʰTrG~t`aݮL^4Lqa`P?T%-WeY-6֠dR ]/5fMQ'7{b$`<{T\M#PDZO7{pbqUY:FB:ⰘEtYCݐ(j?ҷ9hwC-_S[s] 2Ki𥙢x`#~WZ crRk9QHh#OS{2BVl*@L0:< U#8۟_3i-S%6'Vƕ{ЇY|!w`i2qTbeH(1M L%A sҰ9ZH+5x-~N -G71dL`ǖ!gM5AI kHh+܂wpqk2Gq5)~L7蔌4uOY毿ۻw?j$ v吖RI;< Fyfkm7̽5lM5)An.L+ ˠ]9x`N$P (ݳTEE?(8ivN蛚0`*R@/`]_XC qz'9 w$TKk'lK' `[C*Y4AutS>h[^Rµ@&V<P@҈+{󄧅UmrK K(W8 k6ħF[U;d_M%`W[rNU}^hsemg y!c0 prm^΋6ɳ,F h]0Lyy!@*sq"4o#D̏+5L¸ D+9#zÈ \IglH"֞A$MndCQcX#R~!7 1:6l0p62J ;iőFUcOCz4sXdGD k tH-4:ؗ9G  'pDl%n^y:yv|>vُgÝ5c_1,'@Dhl|T BC)][oDZ~:Oj> 0eGRN Fbl񧫪gɝb&)Lw˻w~pO/^=?g_^|:<=x{F?]\9&jg? '߾ˋ _1_z|s~W7&O^ݟo_mu:w7<3{a@7fi?&cҋܰ f5{ Mٍ!/2~Z'Ltݻqo+9>!?'~`?=a1>0̯d-$F>vE?yю?v1y_ɵ'L5Lt7)Ґw)RW]ʟܐCkf"O)L ӼO~3Bȏm_}}NZv~y jh|;3HdL =G7@g}{B!|ZVυ&[I'l+J0*i5ѱI0[бB1_*ҙ%CxZtfS绷 G>?ldω8UFKTj|S,,󃧣25aꘓ#-y 1 |+f_vʧ`i&1S[');JLQ,xRCLg|b'Eǜ̲Q[ƾߤ0D"&|%m'*+kO"oiŒ)krYb*'l#n#FKqLA)Eqϲ]oY`v2Er1-` Ӟo]f)M'1 +Q ,)xRb~ %W? FϴN̬NHA0q~{Bݥ|eҺme:- QY)-S}?6ueLJe`cyth4 F tdԑlbUn΁0RRc9 *Fxda Z!jIHo@RIzֱ#me 4Ļ3UCib#nf6Ky[_^?TZb?@5:㗒^.z1h9klJK[@Hc0c1,^n^1c Dz;025AJV qr#y |><FfKJ6Z}5J܎ i͞|92(= ӆjPad7/M{VңLřI@F.X,Q:I*1v8cpP[t0lƃ֧ڎj'_=>:6Y%Kt"(:>v@S:k#{5'Pbf I$R$!~ ح bZKJTX$V:a~8pJg'i(qh" r:[[r;g^ 2I 4*8`?F3ђ"4!mSs44qp`J%q?nޚajm% ,96o[(p0>A+d$ +Dԓ>XXfY9W ,Zx> @9j8ƊYNs/UȮݤP9m?]{bqv<27o< 'cv7/>\ܜ_ݜ~v}qvuK O޾{0MTr~unknϮn]_|{[=~/wywvӐ_=3CJg.wwzOxuzN+ȿ:&x>sw痗9}?}xC|.:rIY4oty\W\>b70K$_ꋂd {&XK|$RJ*XВ;+VG&kW5 s~:SD5sюOh,SF.1LI7ee*mukܖ:P.g MθQzpDsLtFF; M5!Jr8,0GC{-a` ~8F0awC`N sd&n*jM^zb3^Gֆl*3Gb>@>hYΙ@od!̀bO9B a550Nf`mr N-%1~F8Iۂ&:^HēCOI(*Z+VɈz43ũ:TdJzlX+H {掜fj¢ę}8MI^3?`Ȓq4Oܓ@:FKʹguPqm'3 |y ET:#n/ik& J2|cݖ橹@_%ƪݤWm-!bfh@SMze{74#f2AJc@2rQ'U0g=a0 $ jN>bΰc[2lf7 8AYZ>h1{muTV񛪽lM 0O[vU]O)hѭ 46S1Dz [;FZ/&+4`t\B*(=¦nօ)==yd;}Ώ Nגvv5HA߾{s~mz۝}:_3O~ëo_z?=}雷'ߞ>黟^D:~q,+ۓ~ĭ/(o稯o>]\>'8!vW$s;vz}IZߒ2A_9 DYꜮݐc@z HzI^}aP>rv>اC vvݻA5՜#쉠ӠnZb%?ͫ]1P%YI[, ǚ]u0/4~V99bׁ)Vd/TD1>g%>&'-axmMND)VQp\-rZ{ b}B(ŠT^[KyN`aʍY-T]M&&8b8#ˬ.>BǜA-RW<[*A",#&ǺXq3YZUک.f&!ieC-H$1X2ZexOښ6K%ؖE-%.t,w uXP&iN~ڝ\9)=KS8FD~9}T4 |H?sqyYw99Ta^vF(]aEKcq_Yiy;+hd/.T_߮Yn Ov򺁮#1K׍}g\r/0k}84`,kt\rwώm884ˇfρrfg-J0Znq _* ZiT9_tp[U.rth }uv3 3iae.T|??ϕb9xu87/WL{Wvo_4nK0W re,bx[`W.O+K x]4е,b/TqW*rH?ڱMygq&^Lnj aeѾd߱\9:]Zӷ;ls7q$Xn_1Ǿ\^g]zXa`ͬYjui1 E򩼊T̫ 7vM Mŕ]pv,DC+zr_fe,x``玍!}l#)i { cOJ8p1t+KV}& Ԋ}nbX}nALb\M]/rLi"oqBӄEÊ}0ˌyVQirseQN!,C[RB|"L#pҳIPX!w}.{8U.%A&pZϪh$6 t)0_v*tE+VH+B_nq*(q{r-=D}`PRQuL߳",(|_J“D1V_8[.tt,T5l;TՋmi+LdܕV+1PpF]^]N7`ρr[2l8xD.WKm%"miyrqḽ6ukF0 {bi9ΡXMpS)!1t4pKC/itپvE)5%K}~"rZnΌC\^gqVZCf7vxApc~/S[6.@AAplA\r!Z39]شB.t!Лs5ig=&5vfMzpm@L!T08upe"/i0om)Y Ə*h߮~G/bՈFPm6d'0p+b-.l#^{t l$5Mz9 %GU|TZhcV7TU7PT]_V Y*W/qfzU`fVg3f{Z<+0pEgkFPC!H^ jWNmuRFn0*;Щdju@S!ZC)10_Wa[#&$란l5L@QO!ԉ  cXNRv[7=qB)^Tv)щtTWo~Ef:)-c)Rrb&-Q6$[qme`L嫃 sMϣkM W xe9+=}%@_vc\HhMETO"^g|5;!C7qG0OMRDp[^7%@,]q4'҂jK2jlaUϙ+ ׀&~P 5*r严(&Pt~CANA0NֱÎpj,kEB:?qhRKy7 4K#LKDcqͭb' jTՀM8U Pe* w@w 7@ Z[kz!a[?X_cu䮯6V<&R]_ ݚ=_2NK_UTR6ݴTEiwoOhYUͳUmSH zR%4!t"0 b>c.ӷ >l0OvO~nӿJ9`ޭf`&|]gq4kϬ /c?׳_jId*5QÍ Ͳ#YJKOB(&J;gN(t񳼊)f[!ZzF=pQzmotYߌec[}yt`]aʍy0黲xq}U^ ɕ <"[v,<0FƱ󚽐 0[By/#?7<~X c6a,Z|a=i4J7c۰jID~.-+̙F:x"a\IW|2F7kRA[䵸ծ j(3V,ʱ?: X mh `e>!3y=m>Sp \L|cTR˦k58qv۳~9O|}47Jt "j"mϣAz@=5,R: >-#TT):&*8ޖ;kn sj7,Iޭpo/T⿙^<3Мw~\vO#3'b9w/$YIJ%d)2ѥNdr8qS~/JCv |v3P_CJ\\iDcRlƎ<(6PLrrwf|?Sv=Kd.?ZuiE qHn![IuWNRM0+b)2#],rw&r D5g+{n=yHlxDOYLp<.%˦ڙ;0ShE.*2|,R0Q[g=.l(": ^H|M)G$U8o&ʺ/R9LVd4_P!bGS+Ǔ2d-mxG <7r~$,B_7MJBjQXxy*Kb}Uc@y ,݈IJ,þWB$䲥nr=V6B &}wP6;}A4p\B^ EV&̅ ?hlPSmP{=6 F|ڸ$wUMn3[sppbn3&3U@&?xDzu^k,-S;4m[l_gEPp ;ę?P (6V(&ǐR=(`?BYi"Ҏ=oֶBC1}ig`_q_@(hGk!bfX|~d*Gⱸ)y'w]#uwUIiW阿w~QHou~$N /{RUROJx$I&'p/?wFwvûm6WbzR*{<<2sSHxxKwZ|/z;,1&]f`xGߤ|['/l(wӁwKy2HdYDHOvt7?tb}Hߛ|I3nނP$(k(U_GGq&w2NRK4AK똄%/|t{|;SƬʘJy"]YGU VՙR8hU@$`o$ w7]&2o'_n_0`njڢQ&_ԕZxLk =Q*bi$ Q7#u(C*0M:tz* nI"o.¬˗V9߬Ⱦu$/Q n窗tTŔUo*:۝LNҝ.;L[ h&I"a&H:*<$Qdi*MOnVۋ_b/$i'Lcӆ)3<JS[xK[4[Ͳjҙlbd?yGڛNfꮒ0GeDo,繥K?)I^ހg{GRzt{ѓOGO~>{yS?{UO޿?_{?/{ˇoO)~V>|x^|N~Wx˛o<}{e7??=Ns(y?)7_}wO_߿/~L|Ë߽_~xM[~Ջw??ËWJ|}rW?w}*_?m6o%oހ'ʚaެYۉK`I.fV 맛1.mJY Esٔ䑍>T6sE >E!w4B 6WPݓU^LW0s?7Z9sд//HM[]/ W|nAy++*pDTbmdN3ՏKwCZ['Y[/ΦڟXn0hzscyDի| ܍#9SP1j4F$O J~Xւ|m%h ^KSxúK'EϟxY Ⲥʀ ;+vYW l[y8E)C,i @T?qYpu~_T`L$/U+7!轼p?> `Ӛ@@y1uM\]$ceVssWue]J(1#6)XL&lz(IWV Nk[W7k !Y~Bt7%q-w-bGРC//Aev_i+Ae2~itdԤw$G<,0TY mj䕥!>Je*o7ҋw刬u+47Tmg8j"iI,Y+shh]D`t4E"/4Ml&ڶJ.o4fv:kf'Iҹ'waK7p ':Bl,QբM]d 93sD4' f5(L$i{xRd"kDBI 'Ag4_M DW'"&w䠫) 4YåC!iЖ«sF􆤱2J@sgq 8bjWLD$nc$=-?` .+Z(Ϣltا>ڬVJri׶b[Z<',9^ sī ĨxlEߑk$+p #V3Vo~fTՉRDz!ƶ3`50-.EF4h3BMkM6$}_ų]Ѷ!\-GbNWWͼ\ ?X#%]wQ@L;[@a-J WC(MQR^5qCށQu([]dE;Y0ѣDb 2McNq^36̔̔ %2>+e4c³=V~~+RrZVJW_;37++Q]MY)@ *fLY)R{ͩ#7-kTܱ\ [J7ݦޏxcs_chG|JQݱYzqUĞyU Ut'_`)-Acګ$Q~/nTd9_鰒SU n+ WR d<ӽ5'-Lf{CW 4:| ʔpV$<9ЖqV`{a 4q#2GFRХUV_5R[EZQ8 yZOVq\ ؼCXm[Hc73w5[b Ul9̪RHyIuL,n78V^8:2WF檂*0 4 Bޞ30C ia>d|}6ƔQ(tr;K#88 |5qML=0C;H=EөhYAy` GD]lQre .+&m?gQ1K:s܋ [ ,Q CF!ʎ'rtE~YJޯ׏Ap(7(17] PXs\'P'`v%Y#p쫨6DUI|"EB8P k YҨ`C ]AǑFz%y>SajJ:'|WH{FnF1D2~,7Jp!Pn@7 w?%BsadEӾH -M)0:Gݔӝ/ڑ+n&<8F3oC= ˬV(&'l2@FPyo>;.6.^繎X0 K敽YMn"xOyɣQ;I]kʸ6BTv>niϬ1]8tMf5L1ʼn%1]N`&t6᧢…"wޱE>(dR(9fӭSq !u.lq!j1n'ýE2}wzs %kb>㆘~sZ}KTW~(:,\=yXZa}+2^Q'Z!."0^_4_e>>/ Jz+i9~0bi)z[c@;X˗f&tSC_AH߃[6x048>6pu.7r*R |, i `O+T@-0$j~h׬ $m&+-+B# _Y96D"&F[1. Fi Fld7A &*ǂbi Q+FN0;qN= xC W/!qoįʏOv>k o_V)A3>&9|:9 )sjNS : [B6jh7S?6H*df m顢`B*vd|銪J~@߬4. =m56Uᬒuz%r%j4 GaV> hV\ $eUi8\)f\7+Y WwX)VU@W ~m&NӾ̫! lʼnI^kx?_lbn3M^NB0?yb)! -<'Cަ2M= oܩ| ddˆخ\ljCg0?Qq"5RQXM"鯬8 蝵77oRJZ^7~}jd)Ӏ1]Nq:1SX_?wFgJCA \Z# T$ @(Zڛzt3lݤˠ,9S?=bB+/YmM$ImL1_6Gh~&}@F1GtfUT&4@5[?`,Fl" ':UIhSaWz^!ѻ6 PN_](aWp$/K6@ /9ɹ<BeV-Z[bH'v״6G*u&xME-h DzV_IziU_[=lܻz$ISܩ*1h PA f\ ZحZX[بEk2ˬ<ŽW%/q$̲z)qՐSI3<Ve0TJ$!?rw>kAXε=/`%d=L\%; M*\2(hPj,W`NL7 k%:-!ܚD hؑZ2}$JgP5UYTUMc[Mbn9zF΂O"^ܫ]nhD+o- W 6 |wѲ!0y8C[\(IK INH ffmiP 44\XY3*TM0:mIݲ ƞK'@.V+nT} o}I-wV;نUENe̪EѦoSA"bc'u\f 7'{hiVå20SOkgm-ka$=м;{l'mrdHE6,n[5SbK0JښYN&XM2kN,(˄3{ɻLyG.=)[Pk([J\}gOP0'\NQtnej֢aERrfS{/*l/' F+!kɗ!۷Fe]A/fBܔ*%˄-\e뫵!h[)s]Lx Fj/`l/01@bĔ }*$]p>-13}O-~.f^dle]3PLZGʨU^J҇p *(rz1y6g@CD]Ϲh~EV_͆ VMXKiG&le]v9 7{;(sf [ɺ >˩0󰾡nĐ{<#{Η ^-XvWd8,G6NZ+$VB8Ts*9YTaR8=VjgvoI+MXRRi+GBK ~;{t ݖ}iS9c܌^7/JȲM9K8j|Q.iJGF,+ 쪏&gqkѺ`s1 lxu+B4Sk{&A^\qlҔ`D,az)/?C E.M35[ e"d\MN+%mB^j9_`Q Q*Y>zzH&|HRrZ ima}NrpjImt&1B|Zd>H& &(sVRGkH7ul[;m0RWL꠯n !QWaׂ-8uU8x:`|ѾþxWԋz[5s`?m+mǕꮜJ>EB m[zK`,OZdX; V¶8V n~a F.# n4-S>z~(5X-clL z yCڜb-XdWN}Ä0dL[iBEW~wa&Sj飐|F\/[LM;j,P3qk\^9aM~̬Ai#d쁯N6U*D5 ܳ-d2ʈ&œ)gڪĈb^13/ (6xkYyI+.TkdrD&[eA.7A wP"OG8wCͪ@ms;I4 Ixђ[6aLsA)*اQ eaV(,[z祭H))0V=$eVrK݅0*,(`Q|]@Y.k}&R1Ya61ȥd _+6$-HY[3[oߵq]Ʀx1p.G鲵Ĥ,fcj뱩ZhDk} q/j6N_m1et*Xޙ=<8<__RZET@j8uT~rTN,h':,F]t9RvC>X;(նIu~G-ÛoVMCW*kVpl 2_$bT|p #Rw:6.l7ŒJ.t t3MGښy<|yNےI,ZoTUQZ6X=b_Zz1- a$;uQ/tmOX,o"-~ΰ0HʉkuxzRh^g'̮Hwd4 לx$p ]L^z/s*ZwU$4 I9]k:.7lP&',k|a` Bp,mPiHWJ?֜yQkJ{j fiе@NY){MJ6XVFbVkaWO|L $YZ0*3D?؟ЊYۋm;|IV O$"LئZ!RkV.sJ#:.+Ȯ:׏lgktծ;ںV>Z&*H{u^_lE_.kg;?u@xC1 uv{fGnORԎ`8؍'nޕGj _~aYE63a.]f?Tݱfrr|< I0Z8nJtZDz˪eMt1xmWIh3]V+5'*-J Iv{ di҂H"ϰ4˽ɤhޑ~V㝛wd#.NEdLM' @V静lq^/*<+T axd4?3hK;bfrkTux5K/tʯx6 '#r8*Dl=ឣkŠ ^(do\gngcJDAAO!Ҏw2Śȉv5Q2'C~ZAKAK8a:Oˤsm%1HrOG~zc?7AJn#N*vJYC?S'gztl6DlzΟ=گ' <qm_Yo$3cUa $,Iu8DOU!q_u{@[*P"9hrPƦLyp9&URoI+2Ǜ@rYhڜXj?_Rgaۿz]C('LN\wH藟޿o:pթrӇk%I46X2 ^!h}d$5Z5j[m2 wAPD \It&O&ȅh~'5![1HT̻t 71<඘ ~f[ dt9֒ŀs;-B]Nbx$lg1D`Lh¢H\I!tF|dv殇b!-7Irz!u&^(XhޚmG-b  vG+mӞa.QɴxDxJ}Ɗɢё1xtw&16Ic9 PPוd([sk*r?Rg@~4\GMr ƃz+=ie'&"JYFiͼh`J99 7z O9V+{XT GpZO18'ʡПd8H~DFǧ ی.9qb˄? jٴ>J7>q"zuGnsww/'Έl6þ\ٯ=i1 caA]n ; yX')zd98sOCb sbD+=)p|S>țKrM#rLݸ&dev q/Ir9u]yltWkg6 6\n= *9PV-h.O3|w<>0К]w ^شcwWeps)gK=rcT&5 zLH^d2?#NtOta%`W[2[1ۈX+́sZ;UP4@z9RuXkdBX<%4o2}&ճaGwNSBC*}koǵg~Zc,3XA:*VssN=NtWWs8WX`dsjqϧ1_hQ8ēi'=4³C}'ahg{a~"GB_0x⠼/ a4L^egüLTK֥ysؿG5W㄃qdWxxRN1y:+ oSOgY㆚ہa'lnʗR_pi\x-lvQGPF5U4qrԻEQ2gH0J vG@צ4^l| avzL|fx ?t> 1wnFxWX,vZh)mujՁaOtoܾ}"OO? }y/O?^LRルԷW})볛_}?~~|緯^zͻ0&9s{K|=?ӳۿ>{v>C^oǗU¿|rjÃFlZ>R R~9@VIfO!Ϲb`lw"˥ccFL[vq' oZ>BD%X}X@N'Za61qrf4N#J&3]aJHݡ-6ZڢglXh1D[\z/ Tӡ-ae;rÏ5`$M --چ!JaG=זEK\|Y\p,JH՚ı?W"'4rH$1^4+;a7,bԹ[Bk= aeLƝI]iZ J&G6KT%N@ G F^sA pG5%ͫ+qGWv@|qbEHqqsބ(j">tGwV%|Q[~>*?!2狒mc. 4Zˌ;i  igMC`An+8rݖ1+UȖNE%*AVL{I|ŽN^a^Z*_3_Փ,W S9Mag ZYۘ,Q ȶFZb~yKMЍe"t st/>NLLaI~Ȕ%o'5Kt螂m$z>?͹Bv8P=FZ#T DvPsm8`L \C SGDV^D[mi;Ir(6B6Pl$ |4_Mj9зVrO(&P05MMݠ%Ԏ''W#BZ q@=޽{7߿Nn^/on~~Mu_v/3|wuwJo9=ݗ,󗛟o~oo|ۻ |xo>_}O>| o[|ɷ~qloș,Ü*w)9e;Huw=<=/7 n\L:20;hol-kȋcA?BuJ-DLb )4^h-6 anW˴@l`]¡ &cX| xԁ4GIs֨g^|kk-J m*eم#3@qzfeS˃323Z@ [A?up] ^ @.. *s<^/KeYkI87_Fz~w+Q!E0 ugQqVP;2³)$#0%1hV$mLg>f(,z0b%2edzD|ަW[/\R9 Dɣ@TZ:t|ZMOMRP}.KVUJ`>^d /%!iƄ>5ŤjNV0YHBѮ[%D=Jn,sԇ gXWSm L֒ w trʦ:laHWN#RzZbqL  tj-?)Y"ŪĮ=?3xm4BZ.ROAY2e/}e.J=X J')Ծ43$;8#ZY/j#:zVvU^ ĶK)5<66K~rM{/Wi±ཽ+V'WU•ILW#kaV2av(YMXHu^1EABN /slAZzEu[ Dئ, "WֵZŔNQ|HB6{c!KAe3U_LK)*,2\UZ!`,ɐ8>ݨq):DY8C@j9BZm;IѮ#AUתziifUA2(cf'{12YQɽ-jrLEx-ps?/dLX呞ֈ-6. RmYuI49k)aa 'ˬQZSy/tjܒMyI;n KA'p(&p4vշnXy-;,"pN C1];~G*\-h)ޚ(Qٚ]? g1c}8͈nr(4U+QFan@'%8UQʤ CuIqWDAfN"2~h޺X>i°~Kk5r"TbMP7VǘX>G<ՀXN%FŞp wȷUMgYMK)è,@R%-:!EON$ {]-([j؊"W*1XuamZ*b_[ Yi\WkXȳʾF9Xc(@| udE=C@/[X,kaB^E:ʹZ&Ip&BḠ$ZztQdXd H R$Sh oD%מäYqT&܃*cQ:t.'O)ǘޙiBaZPU;F-½CYZ˼3ڰ$ەCip| $9xչ? &BO2@5; Cy!V1" VZՒۜ`0V K23|AMR+XOc,h#*rVFZ4 WR5j͠DTFbÂ{FRM;FwE#ޘuNr] SEX"#q2p n4Bfy$F +Ի!/Ej-zm\4[X qLܙ'#YuB),_H!0([+~W(C ;&Dk̻3bU驞|T(yd&\wϣGoz4745<<=lc!ӈtzDksNg| {bT_NE0NJ G6rl=𻗻5?=  >B~j ܾϡSy.W?-Uڬuӹu_߹lV'm5Ey % <[%5y1}"( *oz?(\}͋ 3?T)FVoYP˾_?|ygнqy.zW5sf?xDy}_P1g1寥=pQ΁__iU(@lPLie2m͓+fWڢ-ꋪm(닲1t~wW ?LPln#}-C޳ o0c_;R4nJOQ4Rc^V [σ?D?nGQߎXLr3D!Ur+EJ&c&̏lBun;:]uiℨ\3GRHݠֱtC uV׉597gMl56cThֈoiyfrZ;MۨCnܞN\l2>C%CT̄v'H!hQ8!; $Yy.9-z$6;Ւb:2^#]czGbb?ǢjCidzY|P|*QQT?yC͠~fX):ITn8~1j|5mCR'G=,ɪRȐ@ uz/߫$qE˪ bnaQ0%D])/JNYh2 .g@g*Z c֐J*00.5u\GJu"cb?Z%Hw1`bf&&uT /jn%5ko>_AoDR6V BhVԎzVmHidDr#mM2y~%*4&*"T!HK׌h 5>B[(T\$0&0/&jίfv>:c'k6C>D׵Y(]NDe Y. {QQ)MV!M%YLnýޅ=ѳ.?Eۏq=ِِѓd'#Ug3]W0dY&KM{]zc+jʉQj( D&Z*_H)1RiW5=U5d.nJ7"1R<7vټĕ"Xuvi+j4˫2ͪ$CC1fh>b}X]kf`dmeg)T'h`x T,3 c?- /)CFBJcrR

_b3e#[HB|v"!I7{Tr5d}UDm\4NwrClUFD (z_jKeԖX%l>^ %kAz$A"G CL> K˧X)[6VdbzsM{l:)VaI`lM8+I(P$3.Se_6PlXYf,qsE-AEаYJWv8^'}M@"Fbe YNRul>x0r5 *o =҈^ u`eܾ6 ;+ƪ젫ixw ;1LH묑4y" \Q3)Z8nm*ͪeױQ3x)0bW 'vμ$uU;qCZ 3@㸏iB揚8A)P܎Dj 2樺SwwP(,k+WMjFw.-A(֣J6JT>W%UL/P6玆5!f-}6p1"`LqM^E蝛6{<4ob)U5^u2}.6kUAٿYFR LCPCxZ2c\YjXk)&&򱨔g_0%0È J^+rhXdV̑pN%J"0m@d\* zYLgwk/뱙mSbb*(̟k4/fp|<&W G;dR'YW#] Gʣ:9dZ#aՔ!I ${7w3AXCєVo!] h)l>d2 1d41+2M.$Ǜ(l&%Vns>g+ K;qQH7̱cp/1'묧uRRl#z֌ 묁jW)}S1YS~ < {qxgՍ{ ݯǧ_o>-=ΒB"Ws+&ۑN}snkmug>=YFը˯U%kyAb޴;Uv~3KxM ) XS9[Rl/Q'-MZqrȁ{L8M4RilYf뵵E .qO=1fG*VEsLI %d "uLbV FcW"n(\[ƥ&kmvglcw>¬L.\kPQ#yrlifW=LմשL{77Ѧkp9cA\K;$h7~ǂw@S3չͪZB3,d:>dYX!%Ԋ ps;HnzߞS^$^3r _wˉ"ωeVy#|x`5cNƭ&^ՁiHslؾN s w,o4%5F$kN[z󀄭Q4HBpWRYŭ]0J=qt Sb֞jHs6u%2RvDbX1fJپ ё!閑tׂ,'z)ʦ뺸 S\z4AMݡXX%txC͋Lub.u@]tHFg[]qB[y"v/^ ;{~ |ߢ_"nQ<[ V¢wpU#M-f@4'w\ԫ Im(X !zF`&[<:)yM<hEr=iN 4iLrIp4̿闶ʾs^x/N֥Ҹ;+Nzu>驜&]~ <]? wz/_<}tMg T}Ab"ΗNuH *}._?\nf_64k ?6*]9wt~\9 .;\G7SirNӈ ~ڿOc׉zniha/ڗc k maisvȯt^b'|˕(ډ2`.AK΢s`&6Rϙ3rHSh-s"S +XM­^簕K;Gon~}/___^^~y^ [6an~οo_Ǎ/W6w-?f_z·A_ϵ6_~nw??\~O7o޾y{zB/>wnn_~v/;!y}Wo~w}{vu=?_^m~?Wܾo__}{뗫 lz큶AGct2IkUZy-bulM>zl消ZkAi[eXnxq_C&@9M$M"MtMā 4n&*{4*u׉TNz4ѩT?.M?ih,V>MxDQR*QDH.\DQoTDQϻ+qD9MRVٌԗJ3B,O5#7fC!̟n@y9WW綬ݑ 6H q\H xB< ;R>F8n+ !S RHʔϩ*zӧYDlm/^]z>/#GC\> !,IH oybO#^qkdZnnNcSO?o%VۜJ{P DEUY+ X :>z|`ν{/'XȏeE  #T/7q*;,MA>GnEGղ?#[“ tܫ-{ǽ8س4J&Α*/ goz(3R0,["Jj,1t}lJZ@R]'K`%H1W*S'Y)oU7c6l9[^mVh?Gi?Vͤ*Qڊ62[N6]ׂvپc jr@R=] l^RԸr,>tϡf42>EcxdӃ@_q1$g@!Z8>ηavO'F;"SpŚYҿI騊fBD E2q4V;ߨ5Q#eB7|ufZރt)]yG#On@U9eW$Q~2 %.D8e %F+UL _rh˖@Rǃ cZ]ͨ%.|M87dQvSU\@SmX^}Qw&n5g"IZ0ޫi>B+4U>e_J(-,;fA %kLu|S7& y3\ok]iH]ӐNlxSPuԃG.4hB@xpfeuR$!9)?ٻ|ILO7r+l+NUɤUÞ 22T ;< C)M5exi랁L,'w;_I DX N]9°\9iT. Z@udqj"/̇[zOrwA ;tSl32`O`H`2+#0ĕiQt%0*AǭY$r1!n&ڛ__/IKboe%1EK_a2~%UgVg0g3)BKEct]Τs8M9MZD'["XMj#a~h3SYn&iq,<~ .EFo,Uja_G뾹0ִqV~^?οc8G[=ݑH!h6[!V ;a"Ȱ\Ñ#RyҢcXVo q)|`K򎱸l|nS aq<$C&$ؤJfѡU{ǭP1cDH`"JeX B\@{7a"Djߊ!M~}Oo-G@pq܆+-Xo8 ~;j@p=~: bG!5^`$=bfvq8{Q0ۦ\{ҧxr!eeD@)AN 1(O>Z C.@. R'].6_,'ݥ'TTmlV/ :*Ec7dن&)fVmQ\b ϲLMRYo 0"ǂOl Zڂ 171© ͠&& L0<&Is fRhdqLs1a.jf pQ&a/|ýaR`J ZoD&5uHE([WO#O}>)IcHn9ΘQ0Tb!XTL=kr84Rqd]E^>jaNGҨ'*;ǛZgh.š\96sP2neq@㼬<>r+.7n], K._"ѩM+RiK]p,US*9NCD< w:ͳ8j\)@p>W26Hł\%:$e啴2n~K:$_H VR{gog hP d VFF-m82t F҅q , O:.X7rQ)sp ?=sh]Vyc:AF8 / 1%p Zj<:r]F6EbRhy\EH CᰊDG;%, Q( y0G">46G'hM"rtl0cj?:GB?_%8L 87i^ő&^$d%8\R{’D)sϚ<HO9i85:5PEcxNҫ|(ȳBX!4ѓ́5d£9T9fCL[S`{)8RȐ hB HU4T#B`;@)&-3edNre)˲O + SzceN@D4[K`ދsAys W .x$K(@,ZhT;G3`?S7Xb/X4IS'3+oC(V"/0 (1ZEDSbx7 8{ȉH'?d=)FB@ VpG[#.3X6^+̀aszKQ3_A0Di-CBI3Mʾ'0Bl>"<ްA҉LkH-# LՏ@C59\/e:V'S{8_ ^_UмH2# GuHЀA3b7&y3eyk .R|z,WWye,-0wo_|׷z-m`~P~;zt[gR!K|۾tHl!$ 1P T)ːMW9 3Dc%8 )Axx)c8MfKU> 7ϪYd(.㈩YZp@4Ҏq,fٜ{T(?YɄUy5c0rX_K2TvCgRl#g2Dh>JSx1aiY,AvV!phtT$RxEDnB*/^L֥`ɘ #s7M<&iOxCY'WTDk05n7>c3ʛ!I;=3HPe4IJ} m z19j%&j/ t I_C!u#}BT2f*vck 4BiOa*2R=4M+TIR#ģpT }$LNŰdbH,$U~n,?YyU qJa) j+[L1YAfN8JQ +Θ9PAN[]k(" ¤%IXMӦـFwÏ15$*?;*slCɾ~fK:\ɰ8a1*!ͷ 7XnkT-Fqx(4&ƍc]ʒ7wl S!*֩9>Z CXB}/u*Y^[)Bn*+L Zm.`5i}AtMϑ?q#J<,p JXOz wb0]@w\^±K.]ʒTAp efvB;^XBƲ{9BMh(u16gC /ޱ;50y ߽.nZk[1u%0[8W5GPUeX6FElɱ^⸢}xt)5^ŇQj)7 C0z5ƴ$"R%")A,"H*B/v>UxV/ ĕxn!x:pXp .T(Pخ5_9 4ΔbQBgkKfd^ e4$KO(l\EZ"0ݒidJs̃;kz2iŮRP趬.1jtbAqeyuĔi&R+ {TȈӱ{R|8IKJEwt_,t8\Nkb#Ey(6,z/J%P"oyԫ<n9U蟲,u;tpe a@ E ESN9'U ^e g&yRJ_I܏üʾwUS3}e#wT1Tz+Krx@[pZ>rk(uܦRXq{ȶ41ae/Zfn̂!BTմGzq䫸P9$X*$m*XOk+—jڠ4)̥xK)Q5a!U.˟[щiۆ nM ~x~Qpa1ڐXlkW& y"&WIF)q4y1 C ksȔIP9`S%[Vk(  4)ɡ60E2f6XgxcC{A+`o@&2$IФe6L6G`ݔJfl4j'/̈V;5z|P7㣌eug` "ZڅvL/oz(tr-AX}aBC9}YǑ3hZG/ǐ6M m̙~8M@ff<{m%Ȉ/X곫W{&旟Ww>|qyfpW_ڿkr)OWw11!Z/Gω| W_r{sѾ<ƒ|{P{{]]zgWֽ_i;o˟/,juj^۬/?Woyj,,+Tü-p5%Ϯ\$_~`}[`m1/̲ˆll찗e0Gl|g+X?ٚ\_\[ڤ"ZM,]Q,9]kR W,ի;9gW1Wf4n"6CcvO.!< TvÐ\.0ADEF;a>퇟dy 66&՗brEd .V)K@Hy[߇eḫ c*pae3(J23FBS8ڳ tmP|"ĩi"G֞h8"'PX j\BW #x<5"tMAدvāAu;f@Srު6_H4Snrt(، ׊.]Y˵0BӂT8MDYA]jX_iQKˏ;H#_e,<osXjF>v]WB2 "us'7 ȕ$8TG>lGYu( 3\j-V?;%xě gL &ҧpAPfPcYJ\tgЩ0ҥMIIFϊ%qrFY"MP4 {*x,Fh@.ߕK'v=]J=Z/“JAQ}-.eЌ"d5nTI@EDRVZ >ש("f5Nm}vJ $u'8%΄1 iۊ 8.zYFwINOT sFxx6`YH4GTpi\F0hXf%vg*uuKjjo*J; y-&SwҶQ0]- +=zY-TUTca~zDU sd;1Dr\R0-^Uc[h;~w\\DF]%,Agi(0AwFÇ#҇J8) /r!gp#N@# 5~{mqʷ<珅=IKFN@t݂x߫ȟC {n =540}SQW_?|yk}W~EH^<|_ׇ?鷿_~՟?_ozm~zzݛ_}{wy7/曗Ϳ__]]}oׯ~oۏmߵ}{oirac &q%c8 4ZltbgI{v KI^j !GN |@KSx:wF75 PS ~4<(#[z-spPfMɾwwA֑g/@UTBʦR $v)_lHޕba"dz둬]].j_F36ei NXvu2'3\5wA#WR^ ǯm/{b88d)gHqpb_)ֲ|} y.'*/҄(D3ؓhKPZ s?]o1Zэ@! ук~d=]ߛ堭E6P;;;]ŝ!ݵ'i Vhr-1#S&?~{gk/>#S~IY7F]"TORsd1N1)zh&ēSLlX!/a&Y|T7Qpڀ2#fq d K>별 8s{i٤֒ CF" JL%G9$x_* 2"Oo4!erIW;m~A+ gKM=zWk! xSqg|?EsGuGapCZ#)qJKxzOAokQeVMXЧ{ Z]Xغ%5N;=cj?1AHZ2"a"z!ҩa=?JeK1d#ZHp5~x ^<(d5ٳp 8)եe~ oX]#,M1vln. {O#Yqi a8+.E|O|a)ı03G$Jӱt "y `k7})޶NS a=X猐WoXD`@쐉I|" TLn&P %!I%24N$nN$nؐS5$lsK7#q h}}`A>'P T7)X)D.yO ?%ʞSk >-̽kkkۀg=Z牰&aB@_k߾W~/Ζ?&m|ҶW_=gߒ〮x7-9+unF XAaO\{^Z\丨KvW}D 9I[38X֢xp6dgCqY^ VQϏ߯Gz;\{t)vE(2Has^}EӁ^|O4lMO!eo TtbHB«n sb,,SP9ޠxRԴ}#%vw-mV)۝)xEF%UE4ɱl#19O\$UbpW5Iulj?$5yFxd&mxҜ/\Bk2K*G]T[4&Alb ËG1#uK/WY/v\=k9(D2;'nl࠽ʌC:pOAUh9MpG4;F=(QAMнPӔy"MS8eD^_ੴ4IuM%m?v(V)7ILDk48Wg(Y44z2ѐ6L`^Dv"|N)vYV1 ʊ{q4:Р>I7ZX'9S  Je |NW&RݠZfQsz ۖTPtj|Q{8e U{{%}f'y1.@:!Rtl.ANvB+jb`^jVTFh Ȟ1j7L m-RsZ#~$#~F]7z?0xCru<A)sѥ 뚢~?o=MՁrk_bH&vt9an٪v v,2DeŬvD@-P GP rvVg~AdA Uw >:wN˸bwze>vs/cw>sN~ .z|̂q#F2x`,kc3SZ2J25Z;Q1N1u8XT0ɇG dav_g:%:qzs-[<;1FH Y"12dH@l\h%ݙh3}oI_MJK DX$B9o'5C4V\/TCO$_o@%f,SMKB_1R !຃Fxj ڏmnȒPsV\d껕܁g'bЉ) У@FOYB9;l.Q02M_Oic% r5׾#O4DT3AE/*̄,9  @vfZ7ă %D]w:t 聝ru+ 8*Q68^GVw#C"ɽxIDX$uD8T 7 Io B#vRV#hç%l6 N!Ii9H+]wzhGY`5~8\1ĤncE}XƢLnG`4rkt'itU^Dfi%YT1FNSKI 8]qž/)0Ң!y38?;>64Ia:q$as&6CֶM66+WdI3%5^#:11o$3^3u4̨RP#*H$\vo $SM!֖ xxA;Uꁿn%Zr.9vA;&akm*"B܀Q;3^nSFcAsub-X>܆5O0:;Ÿ] $'QO)&]*w xJv<.{p[wJ\7a"@N!TYrrB**Y)F8,h2",9GލȜwD%= #se7)#Y%L"/Nn}}9tȟD' l)upV)gþw|"4?.M.KX)q.,<  z =aTÏ0g1ėڕ^e Gݗ;ؚovNF=G|Ë,G^Yu95uBRQGypȜJz:m%wд"xpgp1%.\j'n5LyAU~hDOC'ZlGZ5> +-F3N bY]2{7ThQ `,8yC ~tln&l #]ʀ=v.(6c~*0|N%".h( D%xK9ȡ{/M\ڀ_!pĚ[*T݄3ڵǙa/kȚLAp:8&4c!A Nw_@!FTzPV3 V 'a<'s {'O\J`ۅ|\tBf ^ Zn M'vODHa`"L @†A+8N%y[ 7̱/̃z3;ј`{0rIIX\L.V2eN2 r$X@ǨV8XͰCwX+HҢU%dVXo},rQee2tY4E\7I} lktNAuŞwbnnO1f 2HCQuő  v:֕ -ğ:JX)5WQJ^-J˧rYTC81'Z XV)?V$RGKs8R<2jJM,h)gy0(m8AO/0aad.3nl%6(Qns;WbL/!U ]^ i\o 8E)^AmJ7I> BZuT3N~3ZF9xO4)3fV00i]GthB "ՠatp1Ap}E<PPeΌKI䵑=:רv1chhEiQGA챞'}`adzAKPGFZ'ٯ{~jת 69;X4`ʫj[V+Vi/$e{%rj, yiR2A-l(ph|a_u[ No>f@o$QYjg}MUvRv Ǒ84[=i6aRqq\`X=X-w:TQJzt.lq_K8X,ul+2m $Ҵ¥gWnvs&Sjo:y(ɲ8u$ fA4R6 &O }E+BxOGjc($E\!0 rUi{!M5ՐqD'gf=^\va+wQ / d× Q_v>^MaZДD8>{&w$OP[sU U޻W_}_Zꗟ?Q\~=VVW/8VobJ/m69\%9IgBp >'k>+Ѯd؟>2U(^=^wS2aq wVpCt)IEh_vs-|cI|x$-v$xIICE$sw jdn-$W~jkF#F#/#ǿFL6@iKp ͡k1/GM {<\h_ʢi pV,ϥ,a;C,f-f ,Jݕ_I>ZCJ691)bI*1XJ&hlhAH.|);T*S,W0Ѡ,O2o4$c[+3 JӅ5h23fhkidOtQZz>(K1A 2єVZmn°^B=<((v kBP[`Y\ߞEmu^6WCQ0 djt P[I Sn"ף_ςia&EW$ G4>ك.a *_ 3U Ꝿۖf@C2*,*i}N f^{HxT"Kj8.^4Յ3T'BA@Nʙ.Gu`!B5+ Fl(&+rURYclR4c Aa-g$y%Ќ dz\PR/lƅXa;6m $|r93BHQ9cț'\RsR6e xW ,<85U D+jAb_ 7 pŨT"bT&[_`P3hwX$UX=,˝~~`&tq;\T`z^ ya7KQ\4#9$߹~rf 4ɹX9œE_dp/6׈N)s 9Ӈ5eCA)HdžeaWfOW ЖNG"T!M ?+ȹA: 1HI3z8XjwX^~C9 me ^OS*8Xο{zT:a)7 !Qv=8E޴i֖j o zVWs̉GcwVꎊ@9l}*[_=2?K~1xlZUWkR7xlLfhSKE?b d~{45.w+c\d+bc(.Fq,sa,beghR1'E+=9˟D?)]mTvвirN9)Z <)KxqSA^tFȮܘ/jL_y6jP`)IHϊA6SNAnh},1G@R9 y:[y^$c{4 V.K6J*0CwގВVeOLuxV(࣠p%CN07M[b_q>`f>%-9K]!ߥI_[ϳr ZezAļcm#8U~nk&S{2cڠf0"aVɣgDmcΙf9{pOsg=bF20ϾŒ/#ޓ{ou``A,o<': GCeVXF]K?:Ĝ,%.Y(>ƚE=v'/FO)oKb:X)$A ΊeEBl tdmL YnAoPU~6e(糃 i2f[RN1ǡ3/kuA)Mi028ƺ)髰$ U&^D>fmx@vè؛00*P!aTfGBiBMs!Ghb%:o_׿?b<)}/w?˛o㯻h!U0TXȡM-}񁮫ue84C#:sN><嶷:SR-u n|]rn7+,==-V8%ϣ[7y]Їrn:wy8eX̃|/d7MHC|oq*Whs7[`(n}yIY]u&fc''gMؔGLuQKIܜ)o ydww71řJݐ6| ^M6(=q8ݐe%ot:Nڮ/~\ZS-/rT/oO|B2ɜQ3 Y^}YYEt/H~"^nԀu=b[}S'fpW#5֔YrXFIv0>.o7Kضې˾ Cj|TS0_f=TɮCjFN_F>ۍJfT=Kvy=ȮC< cORuu=ZiQ2-UQff}:*7R;; ]߸YlÐX}Wp4Q{\k>FWx& ZsN-HH)m{`טo;w-/%EXgr& -C>o2qGe=ccצjѕ9IZ-UodS~cNJ8F ٥'@l0|X$y6qg %|GcM'Irf7RՈEakyj1wMGVHѦu ,lOJU[-AZOw !ڛ쇘[!e;P`y;B(,!<=|o8qM\1yT5THSn+/Sr4f#3 ǰ5\hh1Ah nc_Nba\ΫmREqc&[m~}M!lo2Ronjcv|[VL,qfʸ~wPuf)dwnvy]Bn/A  nCXJ? ą\+|F(UuCfyqCuu9i,$|>"AYd}#5XVrL'Z+BZ=QW!Z _ttI+Zx&(z-;{HRs,g9c᪓|&0w]`gblSFFgY}^F;':n̆ ᳚|$}؏O1=7#X܎c\Re4ޔv,7zaVl'łfurm/؞IVoU ;F8Ʊ ! G74e0x|{N%{CLnY@k릘}򧡷좈p&Ç˸*R{NOzkLjay{UlQa T#)n /WNph7Ȅ3ݐo WVv235N+ RR`{/9}p"JIBf{nq8V;} &g%8d3|j9U4}PM z;Gȶ`,+v+WX]̺ÜU&.뤣Xl2$u;lnunݟ{TmȴIǧVd{飠c~`:OׅC{$uX85=@w[aㅾ4ntܐRrP3;$ X'.%&KN$7r& |z!fP/n!; z&ȫm)}!mvkw'jzhtYѩfw]|*G T En vu/CF^&8F%:v2TQMrgPk)j.P=CWoJ%-p<@l^Xp)8`B9;I\PC%{٫!T} 8ɫ{&%$,8Im_lC/_`G #5<#%Pqb)^߾o~EPΝ:q[yzL۷+hzCDQoHh? ̋]!J@HW[_7HxLS0#vP_b\$o`ÔCsC[f юaD6͢ZQ++â}cRs s~D vtDBa7ma<ޢT=c]v2-%]w/9!\r/K PmWZ^Uv)Pc<~ C.IpJ籈rBN_:ܲq^+O?{4_ E= 9urސd*PFGFYרg Z-JGYL:e0B_MЎ=x̨ Ʃ= a%Kސcin{:5ˌsr90:P頂70+ s߲j ]zO!ump:" rRXӇ^Aw< ~Ք}/dFe.,-mUIB0S V$xcGWz UeZf)E3(Y*gd/ru'oezn(K5bo.ў1w.$t=YKB㈲h'>gv! ~ϥ#zAObg¸H1< [3kDk![D0Di>gE39PF%z|3 ?b4,:ȤKIG MJ`zUӠ!ȇڴk=$j0jCTg5e&"vYNP̟5:%Y+QC/QYwU9$HȺ4SHCSSv*/g؟4sHfsd#GHXR ֪jH4Fa^m[Pb.dw290${ +j{ Оr}h}a;s*)=otC'BC)}o\7gi<$VQ4&ѝhmրGl\*nI⸥9|WN%\=Sr/ҿ=ؽ{R!e/wJwL۫Kzc_{P[SqH<`&n<=6OUeH鯞iQq?98o`HuF9H<<R$~=X\VUmSD‡YomC]Vgʤc `vBZI0n2M! q\v54쳠j*%YkCFBZCi %BPvʹkg-FS 4ڵwi5ZSkcaE-ms[1*Ji[҃Fm iHq`,jq&!nDSte76qqGP͐4+l4n$oY3{EbJ1-@=¡U K{fEf n{08JަhMڊ!)__~_]K䱟o?_=a)_?WN~0?z}yqw>߿x}ݛc|nw>o?ow磝|竛o7o7//?~ݗOo\/??߿_/~^Ă*QtA-("+(LԞҐJT`>y_U"5K0"}`jF3yHܲf% ~ HT#,ffI#K!WƅUMI+ %}b ґQ*)d:*ʢ.3ey ' }xQHQ9Y4K<:b=I} ILZx$EX5R]@u>Մwbu`z(mы~M6*ZbBePC y,Z€$9XQ[ҳdUB9[d5]4K99X4gYy,b`6JzֳħْLԊGҘH9s! Hii3s<# {K)v|ز$$SzmJު.WCCQ|}1#H9H{mH#Y`UyC i9&a']  ii/!'ž\}XdR( UIs&(nHGzIc wF]R' E<Z<.2="iLe,n0G"_ :X2=@E" ^uJnU8c4@g mZ3ۤv=ˬ!S(i5lw@tݲUG'áL!4g]$Y\W.0%.CC*$LQH5Ց= Xբ 3,ˡfXUgEi4m=YIb؉D7Y1sG*U%yl[niMyaEڇmˀ 5OBp*n8pP҈Ka:cլq+IЍD3!\ۻ"2,B}}[뽭!tIXn#=! (8 v > 554Lj3[uHz,fPQ= "t@H SDxMXbyz@1g9Ǣ&c[0ʨdCKJrTy@FB6jiSlf[ }"P `jUzAA'JsE{T?V׽f:z낋zş)+͐&Iϟ8zljCKEFGrgi"i͋cbKyEo8NK,q`;icXoF2q*oF u;|++Wӣiv5S}X'd[+~ RKCh0vHN4$)R;`zVf8U[&  Ӵpl/#)qS54-V/zW 5f훐¦Ǖ^~ dS:q†-th0ƈ":=~ va"nj%Cm2P'JV})?-;[yw62bqzt)>vx =R6[Jz(cۊc_38ٺ=K<C?$zQvwCТ@~&t{:Zj(9HOy޻Z+?SA萂h69vVN}%HVt{*ؖ&A\(.,ӆ9Q)0T01{0Lu1!5HuX ElG$tRAp:lH(1ޭG5qIw70`6ad1){ne8_Uјw@v`D>"@:+Ƚ/D 'غxLGaMρK2%2!@={m$>=ՊcoIfyei{ ux@DK;\>G&1`8ƢI_"d켐v_/P(1m;2lǕU90iKgEF0|рn]h#Yb"*Z8{%럜*>GnLj VN0e`͢/ 1V@AmU9!8;n6|9P*c4`ܚ%r2wn"e9rxt֠c)=jH˔"*?p6XW⿘X N84i<\QU14#1[Lc쳍t?Rz~zUROUI=qPRq8{Me>5aOt|_%փ>z]:հGdMj/S+*Ɓ  69wxt8k| 1QBtk iR"LE>DģyX5DZ1La.5Ff_ >l= %I!{u60?c̞]Eb (Q^*<!ԿGהȯfz(1ȑrX~5yz//v$v2W^FxJOX2v4~M7g( CF p*jLz}VHLRxCZ,Gg:TkwsU%J,і: "}؊?Y=#UD!WL3(~lb^P ~Wb^yٳ:y=fs}uNf*۠$^'FgZ~cen̴ ‡X,Sntҍ+˱BiK1^Lwk?O)ofs=1l2fs*7F&MؿG`m+^Kʩ^x`@iTnRO[ˌpX AQ|ֈ{׏outP~beS*.=V@~+k_8me$t]ʧ^ůZ5#F^}~ÂPk+rj)d G)n6=ā"SQzFH@;(X}͟tka *GBKPXg̼}ۇ~сJK $9g} SEz"ZT4TK6qrT-_<_֞ZL8Kw!b`Kۇr")sby0NebGuP?lQ'KZq=Mbz"F2_37'JH[,uE̚LK:!IunLҖY:ud:."3 ?*t g!Z`X X9E vqxdp|p4Ȱ B>eGW^IJXUS4)齼N7%3$8'|tyGWl:Y:'⨜3ݰ&R&h 2YF!&VǧT`}Y(J''މ/-ADQuYPQ'(>>k7//o/&"}h2{ 3Xs6o? M=L z"'/5<5}x6!y/|^x޼ˋoW_xɵ 7K+OrހWTx$6#B2 5I yrhL8D'u<t-eExh/Y'@  VKV,{GDj 2LEߓDz1Y"QG2Qt֜VgK6E!1[QQi,  gjq-:p<z@i}Ԑ=@#;MNH2?'L>.u 4Dno.0u}&71QHlY6֔\@{ttw5J=F+k怴ZWW?Ȩc0<9w(;7PVCfm/v!<QPVYL7\r{Ɍ4Ѿd9b;n0mJs8A grqZ%ڄtݐbF⏃#Li؞mKYtrËËqWB1~wU঩y>1W^d)}V?GB<*̓ ё|#;ghl΂Hv~x'K}S5@?5Vmoq9aQBѫMIC >¨eBRGlsl+ȁڨHINڬG @ΣrET`|W AXEASA#G '<IG+x 娯bG vK5(hʖ`߈ Tg}oQH1 8QݏugсmzSCyk\`񈗶^<85@ (j&BfR *6A7ȚjXVT3rZ j$5c Pc$DhpX@k(Ɵb:׭p:IJqu(]MusTHk ըW6> 2]oVLXt(IS69nS)U|8VQMusS>̑+i 8XEj=VFl`oiZ%N@Bb:&!q d} U?iK Q eʆLb:%[`d/Nh-#0 eNwoL[c=u0ysORk+HZ,M5(2Ko3Tߩ6ᬨ$9~JlNui$~NXuj3r'W+g@_*lUNeSc`+l[_YGl,췃[)+՜nZw&}[ 3ZkU x #E:KǮ4;kGbβbŊ4C!GW^SΰTsş1i"U9Oˮiodt#*6LgǼmu>fvD_;gi.5+$6>MS:-URֹ5JaC*Ԯ-p"@ af;9P bda?6.qPAV07d?!-^n][kU|!tőM^+mi|#Y jmb|I-YíPt&#*[}TX rEQPjP9_v5Rguu6%UeI"-PǛEݽBg|,:eyago^3he{ xwyFgXA9o _E}phElC&+e5PڴZ{VLd`N)N$xeg]ûVik亂,,jxlSNU<%/"Lx+AeM-)]Rѕ\b[jE/ 3DA(׹ŲK[` |yJb,2*s'U>N DȻQRYLisa7فimlXv'sD% .WwVH-$⡰ې|JY`ԘNTYŤ*ꓛuB.4 N 7\s0:7ppprEye%FCA ;¤MRq<<[7Ae$I:4arJ};!S &fd!U01-MməKAY]!dg鉷MLV'{js*nR̀Pє(`|{Y K7~D%Y%,vh`Ŝd't)F?N5Sv/^ {4N ՗/b^{C&W_JoP&ޠ-b D9!!r|qyDHiŠNv'O?o_؝՗j?8;<|ׇ./oo7a^?B˛w"w7>zubꇗǓ?u߾y߳~o~:N+I+mW"񛨾.l/H V}s$At>/^s5_"^vSa]{}zfboxmuuak}ALzTH}O&2N4^GuGвMv~?ܴ&¢鱢:ke``r6åBZ,HÐ<,+k]b ZXAE.wyN} 5X&v74͊hLPzS>Wzn7}DSzo̯Gz{Yӛ^dpقZ9,i:Kg=W[Mq'cԬn*M0bX88cG25g1tݔa1;ň̘L+3#Y=T3@U3U(nْJ(rNֆCǥmYtp+W~Hae609ˍȼ&'#eͳgIqL!>\V s9;&Ŋuy}֞cěBJ:PΘ[Ͷ<;:GbXn4uRs]L^2!~t.uUNMu#6,ILrЮt6jI ٿ pMY*+5x뛃_sLevQjn!|1Y5~VZ,ZkE˗&kpp:Jz EB1(Iu!D˶u#SҗגLcÿYZlldsC!ܬ]9VTBN\=۹utIHtLpm5k=ᨧV›vv} ~i=OWi1y?]3+& rt-[!4} /_7|ՆuBHL]ӓ*rK֪qY7: i+y9n%&͠E`.OϚvk:;wHI~ ?Ko0i/nیSdG_:EgU5gsִJxi璬*;˖ 0\hth1na+[n;ˢ¶ʟau?lɷ/Ď&9y: ry}BD 2gOL?{b쉘/w_Ysͩ2iͩBgN4}:%P]Ż_-˻xR&~Ǥʋnކ{a39G]$|P-I%m. =1IZ ave39ZGg:&L"TIPǐ=#< 34qQNg72QLyN Y cp&3JQAZ.ٌ)6<*Q,n2B1ۍ<.t)&*5P[u_]dۺ g-ѹ.hqPB\u@By,ep /P0̱8x TuA\H4h'MQхu KH?=R/>$+@H&$LsIA'R4e4̒:2hBAL)`U_R}Qd@ hm Ҫ݆ OK cªj Y 'uZg!.)b"CmalE>K9b:| }-=2Iwc3ac%l`Ji5)%9fef4(}&Mפ3TAZL΢D*̌Mt~)ÇJڌ~T$3rX 1dr52]rCA!@g9G(I!eb0͡⊧:t %(`a21p]P eS;(zv FF+n)qCd;1n&5n(E<8"Hɲz7M)TlhQӰ,ċǨ:' (r jC7/tɼ!zRAD"$2Mu5qXZL-P\ o'n\K6w/]aʐSEXF6ǒ=R8 SlTGZe)@'ijl+hЮ#+0b~C&IT0膡g:Ϫ(4,IfArJ`-+g)ռJ^$i=L`RF7.q4\,@7Xn!yfz|Tz[RYRáPX (ih˓dJ?\Dˉ詟hv?_AS!S-ϝ1 w|_VO::o\X4`ιf?5J24" &XRS.l-WMD34V~Ժ4D %2tOF`B̤0b99AŅJG0jbw  D#3o40:ʱo4#ǒ躏5tYBc,3F7HPKsum bYI$i t!#Sz g. ȋ}?4X|rCUpQk0tL8j*F4D{ Zf4.Lz9=e. P*ls b1w`<~ JY$pG|D") .w`R+GYP0x<Ԝ/%^v!^ a!5ҫq#PHJW!mV4a;]nhMeiآk4S\ceK]An;yq.OI=YvIk-c;Eڨ(qiv@P^R^#o{~Te] ;Ftt9ThLyTc,ojٙ),Iם|6 ڔaeDff%,! GUyky_ ʅȄ&. ^S6 hʊl1G5+Dѭްh#cgg%fb+֎XӮ /fs7ahs)O)ghMq'TuR)E11b\RlKQCΥ|{BŞ)?j|4փvuջ_>>rx)9iڑG!~jh[tiUQuU !VK bovD6r3$v!٨LrSA[aUl9JT ~o%i_]Qk D@DV4Lz= atiZ3Vh(1K?dK]d,\7VK.&>!wr j`6 "%Af4e% {EحW*y*$L75XZh1DaUe0; 0[9#oB5vv\;.Je[g.ݴE}ĭdW +3㕙̯=#,^tl w`VHT8Ī$>d^ᘂS('klpwuXږˮk=5P~RhGUQ\*GsdaFiz,4c'\*^ZJIQChгley;f&G%X$+:R@ 7tԲBQlLY!r><SQDڪ*QlȌZ[7^-DVH"b_Eʬ ~Dh-$=>Jq ]̸a6(K9X"S,ԶSgH:;c^~pV:?CJ:4/?oVҹ?4!EMqI->ܡڄ sP>Ր]m,<3hɤ*ܭJkJcC! ׁ0.F;rLH\ /!w^lj~G'<0e&<\A7Rא)RB D"pH#H,TCXa)zAV¹~/m0䪙d-z2UN02U.YxPٹ6g9 JG?(n Zf:Ѩߔcܶ fȔDGn_bSa^k>49yKm5rw?WU_eРZ($v#e$Lz,U.lVp:G2Qd4[sNFc&QZX + kL*9H"ClAPa5d̸WIS u@&YKR( nT(yRRHOe~Z4ؔK\˻^T-O5x"w@*>R*4g "l-64SEl# }{,TrjJTR80 o#;,IX܀o6f+LN3*܉Q`FWh$1h0KZD~f:CK}3*Y~TL)jr]{ ;%H;BP5 p:O(D1AS2̬Mw(Z<@M0ġU Jx\ݻ1sź~-ԻKeTQU?iJi&>:?\x>k]_=]ה6Pmu=W850ڮ Z})+*~̔V "N)c=ỳ|EZMkL5t}7hܟ\R,ћ\v2%I äl70TG|ht!ʄL`1?M+uN\C@ɅܪG t{B+JT5eIpƈ80ϨKfw!,Yx%βcՅ~0!_v(k :Anjk.HkyUCEv(u: `; Bi) X,aA9-M,IB7B.,RJx4gEqԱ+g@c|߂ J@:D؊ &h 5V*w`G6M|f1%$ ahX3~m i倮9*Xdˌ.mM2k&DJ1/Ť`sfx5'JldUlǕXnjMnsoei|C##w0Z(bdTp zGH;ƚ3eH,*뽃DelV&ZHd I3l1< ! $GO5 ]ֳIDr>mNL4滪h:BP( ڡi&8e!1b׍`@˹'g7KVn x&K|Wn]UY2Pj6)"34Qa2tKnATX͔IM! W\q,]d JpF̬N8 %5<BDy9K2y@1{z1zhlx9D-U\ BE-W(XE1V^qko8ڜ)'}0ii^O i}Li2^JSvZzčbct8<6,3f غ(^\|ReM)CSDR)Q6:;]rֱ^iL QEY[krTBˊbdI*0_35ƭodՃ(ǦЙTFall,w/Kn 7/$|@rH U~t!XacX!sf\ ഫ%Кpwuw6|мLKaE!h [2Ӂ/lڳ $)2sGOKk* @ ET ,(~.)մp8(q'KӁ` tzK&VZvOok1/ jf,7b5- 9nLF+fǟp۰43L*)IfH\Bmjb豮V;!*mF13Q#0ݗ٠xC~hR KZroj@˝ ԰UqQa:VJa JI.!*%HIbXi7Td!tVSB@@OPMRNB琁 (UUB(B@oL4A2灎-ȥu>PԙhߓĽzz{Lh3tdV뗇W ;ݩk߁SwW7I< 7k K&U`b_GľK#,rיZBaK91t9kcfĭV|}Y~GHA>"xa`8e#SdL^|`?#fQjs"{YKfY$&( v;a9e@.]dxJE.1W5 r5 5r(_&cM}BC -]]ݶ}ާAޔS5+Jq*-+rq._nwN?]m.-dN^i}pp"]}'Enlq.3̜I׹~U',15Ke;mWi=bln$ciIC tJu0x?0f{UQe4x ↫5Z- >rL\͍.#yqy2MmJ᳌eqZbU6V'[q`FUyIAX~20:ͣ)*[lAO5tGʻ8LZzy-/Z^l/`1 h>.N*pIp;ϞVgƓTY..nY0/+{' gۄ(ƧƓA!$7;a[WPYQu1(a__YX_ Q,R8 Xcs>LQe(:2itMbr(W4=Va݀obQ OieAeS$ Hr4Â0 V݁mԃ34 ! BȚ)]N:#6i*,8fF%l}!/58C\w/ф>9EN(1u:ct|pRƃL:bncC^ >zUFa 'ز =h&836I2IIs}PN%8iwJr{Nb` XZxϒtE8XR o؂K@[| *VYx0fL4do}!7{\rz^u^Ԁ5Ց>-{ >79uas'rZ"oa #EF+#2/C/~<n_Y~wW>_ۧ^7_|Ӈ~?ǻ;~ۏ>=*?.?>-z{^廟㇧^?e#<=}?~?===˟?n?I=>}]o^.ӃsOwǟ_twr?=~^JWw>_~ݧnx6}zo~_O,~߭vQgS_Eb*kNPvSkX&e&f0)xc)Sr@=*pܶeH:d[8c!805Ec_Xl(객_L/C^7Nz e~Yi;W2(A*Z P&}}0"J8 4Z_Ll$Hr .,%1?PRlwlCH!#cgFY.EEʄ X>Xc>W̖N Yt0蔽qǢi b؁ 8e )IQ!);_(Lr$m#@>ҸWx!d]ݬ*0Awa[H'ţw L'Uh;H)Z<Cp%ұ ɀ:=XNK&bHN>ZM3z*pڇa Czl/볆5Qv+#}NԦ"]u A8찠Ja{TGmLsqn< 1Cc6*D D;qј2(76I!i<[ԙ.COH=*g¨V2ocf=L0;I*4-vGNGL^dYV6<#9=a!ca.NfpA[s8C^ACpQDEM9'j dB(тT흕1)6ɅEEKxbSCS3`6"o 6dZ3XaLqR C:1,lϑIPvpކL9: i.y=q`#Vd,~oLZl[M@u 8"ŒH\E@f z0OY./JȑY̐N?ћiyG6^OZAk-YzRd0)GZf:Y^l% P`bv 5צ~b``6mg:ΦE^[XFe3I/=*`aoCFdZ F0(ʡTӗ5>D]#p??i)d'H)3.4)fّUk7SMQ4 & u:K`ca5B\g4H!r_ U}?{<Őn5ªE R&J>",FCUAH[ȣEWUoFRM U-NtSݔxfś*:\y ,a0&0}R <TA(²p5uj`Z'5L5()Nmfqk -֜W\+g%Yu؛1 *ŌIqZg9;\)i>ć87TB{n* 6(a Nԉ",L AYsxyCUGf*"u3s |nh_W.i-7v;[ӕn|HsNzjJ}k:jҀ8\VJU5put@()!X,4KG@khU7ŒҐx&_*U*m.wX5 «܀փOc,l [ `#"L D}Wqd"?Rif|=-aPrsa9ى馑֫d Pc9'S7>2!N)9YhP51#Y؅F m`= o~TĞnv>W6!: zXFFEXܹS|s)m ēG\)TG;PGyIXYL#.y e3*D8!3`Qy9D1`:eK9{p{O-正¹ ȋ=0eU&F6V=-WE% õ'[iP-DWicQ1 @ǐf5^a)hb+6媣A RѳhjgT>g\ P N.-l5V5'd2< ySOF?r2tU[f =\\AE1tF<3 "XrU}"v~9L-&?oUe$4dotI氼~lnI^k4Wxл?G@mݏwo_1Uѕ} 0}~ ӛsͧ/q<9+U#t+&+[Mr\p DЋ`cMR FnF``0_cII纅K5P1|˟RPǃM"c7IæxdkҵDx($U:BNSFYJ|(O9ݗ'Y$H}ƜW_GXi@1.(fz{@3G+dQ-pQ'0ȕd](k!TZj VF8uy~C[6HHMs-ͭ=x$@#8NIuWpEe%@V$O~_8CyvU]e,KuPf6dH$vM3eXɸ2RX  %Ik'xjR\vT:IXk7t1&-7@%[kRHs\Ggp >H6F 6(ꋋWRƖ7)]Q@WHzj^Qʄ4%7Mefݓf50"j"x4ݑ/czST>-iy.mnU߮]aV.AmaG#9^+]m7Aᮁí=(GJboA! [y$he"ІE`;>G5@y,?6bb>|bf J_E `dF?ح [N,T')GKeê)Qm: R u 8?WLe|U5 5G1ҽar 5UlmTer 3,kwJ컈Xʶb@$wUQ!ٲ&D?;傃YBR/ھ4S:m+ī\9Ӊ-*D(!xsy~j(jo~:9Yۛ=c/dog^3Rޫ_;_g~f~ȯ7h$@q7O0̲Gk0JfP82nX<0ʱ0d+#d vk qHy8aKkJ\UQƇ6)Od,Wbqrǹݠ!`wpd_#(z 8-3GQyCIhA]3 ҹJY6tNd$Ȋ8 L N@H8!1Ahk - 4U* .րsb-qMM0̽.yHik IŘ\hU[2jIGO+Ü ,#c}GJgx+KV `*W|\qzKT r~q AJ-^JoPn p4cSNS 3F3Zo-8 l O8_*aZPj&+a0=cɨ/^GN'RR)9{ߧ叞EoόWPo~27?޵Q~ œ8*`n!'E;TgyB֗Xhq"0t]iw+e]oH\w%z+R˵j$GYFEM*1<ܲvqEoSD5[يjZ?ij\7rD-s\wy+%u/%s8w: 2p}mXGO:!QANk1=L_Ddal2%rUz]Z^w CF+{y"éV f[cXu@\-!t"q J@e~VXpG 4CpL9 noto͉:6(#~Ҋ 4%8 6EU`fxmI=oTs% 0wr__7m=JY\(ÄSGwXbpIyEJLXò|INLuE[O??:;/}JL;7z&|Rǻ׏wccO#iZ+Ԓ'%%EqUm$z=ukYe"bxtl``sbg4XVRl>$Uq5͞L1):JmP. Ymp帪ane B6M3A^V Xdذʡ0o۷HR7%i75SoI\ .\\G$?} ^0fԕ4v"U^uUjQ% ?  >@*yy J3X$؂b_#/@Ŏƒb4& ʛ8NJʲ ofÅ9h a \ A 90x)1͊o-N uFiS1Հ( ]Hzv3/\h(nŸxrO)Aټ$P0էN]Vw u@}5ݗ1畍ВX},g%{xl$e! O~FS[[%Lz ]Cv._jij,l%[dm%$d/.@^T#.[E}20X.lXy'T ԭhcE]t][*+u^6)L-D_ y>e.SO@ޅʭ 釽/m4p+w-vۑ6[V>Yrq}IDҐzfCy3b᥌|2}Lb b{[hZmd}OO2c}?Ȅ9k=)h%]ёT[Qx8|Yѿw[S%.CARqHZ=:B :uV];k6R!&,ѤzJ9= ʹS0Heh/63(s?t)B*1{«-gmSgy-Gax!BV{na{BѮǸs=)'' aj>ThCRBIJ&z2LbyƔgZ2ߠa4&2ʸi ]~qEϟ>\n߽S\,g\O_gTd\.G szְaIo3D ?.צi%l7Zk+?i)}!2]J>KrjCahbRվWipAYw,Ц3B^aoCW7`3ڸSHr5V͹Ԛ5;As_a#UUfL*n$Z8 ,)p[L}-U8zF8] MAz,iX lʲ`oԇxz{pJȅas @CGd]|R -gq_| knCˤ61)a)Az&$8}5*0]KCC >biT7RGnhj hqJkqzI)6`#Bsd_^ 0:s`0CL`uP! 8;%Qf#1L۔\F-AVi=qS51LP;NBV.{sLbӄ]jm(@1ϴmS I.\)YN˔2˔m2 ~!B8@z">-itXϖls(랡e|Pix4d[lHlX|mIq=siriЉt೥^fԭ[?≃lǪ3 as{SPμsV׺nڪFTS` aUz4T/xn."_v5XmZ{*'^m1$mv8d ΃)!~6G]J !tSX`;ӍpmI X3^ j pK,U(!naU#o;]B}-5&L\(+ba:7 7X@^*r'L pJ`" .> Cβy8Ug`'jw(pLɝ4RV:0),U)BA.e/c B J3B*xE=L|>h0Qy z0 Fsv>AwR?_jnċC.os݊DnuAJg~DIWmW@B)J WE.;}\)Aډc<ιe\z'аwC?|ݯ@sgi.r>xK}g\>_ק-{>ȹ队uMƒ| =_ӹ?f `q<.׏SYi8~ έiFzpQ>>/1}83}q ,eP??E}dđZܜ~S?~כ yI g_~ݕ6>4&OW/LP>x廿_|]Wn^]~I}ϟ>ݞ <^yon?o]կo?ow3ϯ|-חwן~sq6.ŷ?^|ӫ]ŏү6.;o 9Ddc yA T(22!q*@0@ ט{3I42$wEߘ)LEY#Е' Y_VZ 諨y\bv0 H1y|fVDjnpjخс8x/ a_& ð[r0_0} =kSre`Cp$k0ڙON1+zp.zPHeCX ca #:&vM @׈%dU&R;aeL:5\ש`ZqGt~eC aZ]D f3|秭@gؗ]Uٍw9k:ϒ@oCh}rިW3,#wX@4 r9lmCfd<R/&KBqGN:"Y e)Is\fdxʉ'@&r8 XU}E3k?s G9ه}8CT'HwzTE,d3{}@-I9B QBwz 7e@O`DF$GrN CSjT0`D e((ڦU?zSLޝ&aζ.yP3+d.KBd۩ 0D+F6^5M:$;?!H m0l G-\O=<dO$G?0yïkf VݏelUYl%kK؞=+_svڸݕmםhTi\fy^>ĕW)̷7woJH#_%xXx{"IY=HN╋!BBJyI=4,Yh o$V%ⷩsTZHUV5]/`(GC1X l̐Q_,l,Hs&LTS!9ț-ueM]}"zF0ikҶU۶*/s7 I@eV5B `A}[_qN+ug{3m&1!S'ȺI;< ?oMylk4yla#acTvww74<=pdk9D$Hq:^/O% rhD1=g- sZBH$tvfIG|<L ║bCST @uE3lGx Y9U:zM7m4:% p K^IIl-XՓ7Ă.ݲe M M8[WH318VR(/hO e >[Gs Y*Q}j,Y%ZὃE5;$2y琫> x *Ehx(]%?q  RQYxj~0HJ)Fý1TT>)WKHQ F`#)񙿎G"oEf6",sn ƓVH5&^ A`|AQȠ~Qm@EѠIMަY[YBEm1 Y)K/h.ha;k<A Ĭmuw@*Aj+^p7DقM7'α \6qǜ_΃b baW ,3dSkAW%no [3 SkL*JLH07UEXTTE#84]l[ &l> qv€Bc< 8[D=f@!6ΘM҂ym*y 1~tQuu4lKAJ2mqɕLe|PQ[ g LgB«NL>Y :!ڒl-=b{hzY t 5. -m7k\qibc{P+UZ&,anHFЍ`.K78)U,F,@rcH$CvjPfMR-fTm}CL<#рW9E'qPOћQ-pӱ&бsDm1BNe;bZPL#qfA(.VY?QD?1ͅY H\e)<]S?C (&.hԕÄ́NO !c"EQixnQEOt}^DoUU:ć.ߑр`ߕj4`l*1J `,k\pR+'T4us u{}n XF <ŽTs(]N(!jJm(]Ne&ěcY ^PF(QhaPb+ 꿾X(oUӬid,rB@G[55 ))\_LyyL2b0ƒ5wJ6I+km?|7Wq^$^sywR?ߧ0"Կӏ_HmKWe82߭fxx9b_7VMkՏx=yk<L>f/>>U $P?}ܧ&?psGC] !T6%ÏӒcs?FG@v8B/PRV/E1вP ǝiʋ r$?ҋY1ǫ9Cz v)01p~ $ђQpiX.#ddv7 ^G]m$$+qp؂dͶ6{ؓ_䤵|ػ1m65ec䛓 iHsҬ|M`# C1""Vq#L9̏- *+{F9٨8{DCtz7;EMS[(~͛d Czןӏ^c/ɔxm!D-_zs鏷?_LJw7w(t} \X.Ӕyc(-jVF Y[ȸ =dPSuL2kyn*Oqg'^}zeD]zlه)1ڼb֖pwՊ-MXf=@RѶwϔ, U0 p454ţ UFXO P" 095.7)M>h?if?Kݥ!ExZ13Bn4ɛv'Ե?>БMK΅X{5Jf 7Re67\S P88z[/9<ڑ3 Px_oR\;\qYB_;^Vc##Ylė\ڡ)G#"Y-뱎K~fQBriE‚`;7/PV'7{_=U%T۰sx$vr &SGPUc2B";׬1z0S] )I#Y̪o p ,W(D6^\Gj~ 517KI:Y^jKRͧL,W-ͅfٖqسy4eGSk!{!|^ ڵYP[mP-#kʊvuT:ǣbЫ9X&!d<0G%?{}i.XLґ1>%[^ᒳYYFwԑΣx W۪0j,B#:lvA˴Uk J}0y=)0G rDuʣvr! )JO/=%s} ,SG·Nf *ԣCۂn MN>xs.HJ2"4GYoccr ů6z},ƎUwL3ڮc>XCMWyIݒBz"V,XVmYnc/Jw$_)D yh2raq9F q z$o>cjΫP%,X&|8wg/|JzamxRa?TFOmV cT<%LGibs,Ev|hT*ü0tّ+)ܠɽUQw{ #jn@ز:JuW,wqa4m)19sgldVU= P$zU,ՙ年?@L|=m7+7nXinݏ>OxG*c~) RG'僚^}a3\HS$ 1o z|Y&涭o3SX9T)-\xO> jx yrLzr.۔v6Gm^YˎSA;L%paG?z\^Xؕk~Vm6 _nȦO`JM*.8VSpS=[ XFaDv%41M Vчc1IL^ҀƶDHe%\װY K%]V.T0mIIp?ݪ%]1F-ev+㭗sXBq kʝ ɥV[V{"F&G0Nm3V2{ ^ y -@*ID, Pt,s<ɓAB-z^?+aP[:,Q/ű=HVH'mh~`9v,] wp{~04ϳ1{A0c ͘Uݴp;Yo $ټztdf6ļ&rh4D=-vBbDMϳ+{>K0/ƞwWN|cOً4ғOW/ OpknۏW뿯[}y5CЋgَE`\i^a.c|Fi: E,oD5\ 2G)x)< Dϑ0.4u$[ 7e^R%kN1y_׃t,<8Z0|NrdZKU Su\a 8]9]]d+ˉY,  uVʕoÙ&RK@1Y:xS1.,8 D1n11 GO;o U[PTK0p\V&Gi{zVPql~qoxPVne`y/Ӷn0&20o8Z #pT>(A%X7A} G-, qMT DԜ0ĸ9Z<2z~^؇US$09d#C1ҳHڞ"cp`°L, Dt'=x&W((H°Pdf2K"{fL0FmbLOIj2AD9b eX0ehP}?&χʈ߳S,*?+085!`ELI{`#Km7|P׉p{Bp&'&[pfVP7*r η=cK82{HT&La5zK_M\vf fg)M𾎓J艼N#q'ĦIAOIyva^Eg-쑉aJxfMtVm³[Az΋1?3mzd-B͙ѦK0rV=1RM:T .k;kBCڵeʼ=ȕ M }zF]F>E OcJt2P#:Tn)56u`d֪ Mky!iy=Yf)d=rάL:zqǃ-*MbZX>۷fZ:6tFN` i>Nq(^6Tr`& *”6сM >`'hHyԉq+Ԛ[ыV+FMG'hL[eroko4iP&ZhuWrĝυܼ%h4h~Mp=]3腲^/u_`a1{^zu{/e؋U}, B;[&jEckVb Ot}ZvVz+U&2t}]Ly/.s0wC:njo+^@OבT9{$n0-b6d[:d&(hD%r%,k%dW/.cw!l϶؛`# d )ٵ% :`g}%!$sNR&Ćaj[g z9ƩH]=1iZOާJ^&Y qvPUޗBOcuٳ[.>֜+w4!id/8m"\WKCfI37ZsMM髱w 5! QdaؙemX~a? Ơ hn+1D./Jf eXmO0V¨]@6 -&Vׂ#*kP mFMج%PmL-ALoVM#8*ŖfC&9Q o5Q5zWxOI.zܸVD}n`I+oSҳw7 xCւܼY@ѩn ZI{RPe'Qrk,v5Fgg^5/4Z7/?^]:qy>Dk%ZGk,0oFk:8Ip5D7S#2pB n@zj%GJfYKkraɅ噒Qo@4ǗƳߊv )S Bq+eUAB㙝Ha?;O\? }iN2F3}%?e8Lqb:N೴nLY1HELY)1QjYGo&nmץg2v}[zݞni׳.A;pP!d>kItw=s7*Fs&R&pի؏a0*YDx RNحmNghܶ>fsulWJMQj l+B* Hl=7V?~oV7+~Ne/9=m"ߌw}' K5+Zߞ\rkŎ}:,On \lz r~Z خ#Cvi+f%bS($t˹mn Lw=;7@Lw= |}3.oblbJrJZvZ{?.lNkuݚxLBVl*.kLw?T<+'|#dS +jxkZ`vQq>;!dy5v`Әt&4iKY<V:Cm&%Z?+lJ 50Lg##E˝Ŵ=+gں>ZZk+pΐ9stMo-㸺l kȬI(e'#Dg״VHH&ɶIlBC$3}k7.`_%m؀Fe~Z3󱠕ȒP@e_A&ݶ73Iyp;KvܙٳW/y{t̞>sv,\DgWgM~{ ]̳ٝ/=opc#g KgEugnv@KS?sYz?t>qp47x8^3ُ_L~%T{?gL?3 <3aͶq3͚ʍ~ p;]NY亞>xZ6/EiJ3m׏/ջWLM0}uzy'Փ_mۓob'SO_=}n_<{峇0fuͻ7ջw>>̿^~_yx}rJÇz+}ՃlዧuO/zw^|+tw70on]q޻S xߧǛoܾk\ w^~7n{{ɿϷo~9~?p~7o/无0ܑT?9I (Ub6%~AٗLQ ԗX%~Ak/)k4?A'4%_`39ο|+PBx[_pe")}?,,r h4Gk {J*jT|(˦y:IЂWe Sg ?rI2_ Ωڴba P;d#w2 T-xUyTE }SdaJ!X-e92!0E-&$ɣ/I f: V@ݑE/807[Ip,a*mE#i͸1g%)p YHlU 1 ؝K9oH -YDN2sBˏFvL2e%INrwȢm[#gw!+O$@xl!F8tKf$$j-f玕c Df!{"G0 yˑL# ie5{D9K$\n'A,ʔbv.S/θw᫂z–v3DV vs(+N0_pLLLQS!c7agb$MZRPgw,tKmn66PYx/\]!mtNO Yr.~UY^V3 LT/hr@;6anu퇉AdANA/Y{ ὲ•BʆSS_MS 2ZҽsA/V爄k ;U8Gb1+/u a{!fq1m]XKcX^ls*,%+)T%l\-TUhKRfiSV_U3ա:4>I(D[x1|#z{xg/ExXۿo~x񷛏_?|JGfFZ0G$H0j@נh(2]W"h!^D%@ uvhCZfhk'BBwgQ4(C䑊&^sTT0+ X1`_:sL, en,C_БTNVD WF:7: u><JS鳱bDHi!j@H(,UÌ dizAiOX% E=s\RwţU 0Y0AZgTb0^XCEYZ9|zkTeCPahf}-UͰj| vCR0d Mx}>V4-$N[Eѷ5bM_Nm(PӊK}?C'Q!p_3fV8q'JF \33JprNR=f6dr]Z #nlf5 ScͯD% hNbeYz;ъABX* s#KWF]hH`-5:\A,"3ks<(l4 |xEUmZ H<{nE$d6\ͳAf^jkB -,r57d߱+kHNȤxϣ޷C[cc 9݋; ,/baS$*JsE܆Y˓Os :Qgj)G) /N`<Ҵd)dڛv-z(˹h_z bbC),Cׯ~zNG=g6tEWmDOknW .$augA@l dud>U]YUԥ2yiiZEqx($@'f" %^gBPE/qFƝ\9i:z&;\~g=yA?&,W94U^rm=rCla7Y7p7Q g9RP^0<3BA;[B!(K`WvlrxfWmWh t|NwU8.Sm\Z- Ȗ&e]y?|oWLҭ" S'" GǶU^ny9Zmt9mΆzsUͻw7B [D4/?׽v՗//s5D/y~wM/i a1zΜx,)6zX3&mTF|aCaq:1->@?{s+@)ySK)X <#=],IS]Q'g us "`8RB,Y8y\XqJ,/[q"'i_/P^"Q e8Pb7{4~86F6ͅ)";)3m#[oؙiF=y"I$ՌQ'_ +t"=#e}PBn TH,n{`.uZAqr>^3xhVv l9(DiGW,8y/< !(˴tRqm$x/sGw~_ќqy d(J54RTY\DfL:\2cY3ymp+UdŞ-"wUh_Y*1u&]e%OETx"D %)0ѕЛ *:4IԵ}=Q $3A݊Cp~DNPf k 4Xb6XΖOX>h:b­-.wW#y_ۉˢK@5EJ\!}̂碶K4 d:5F+w?V$'Zb. *;xQODݾV@z rҘШ 9mZHd+ 9З^ˏGx#24C2@O/"/,ZpxhS"J6Ӷ`JV]K( vQ;%iFsz|g X.eBGN$$ 3K5 Um66;X|!{)66Dt!^"} d$E8;:KN19s1EB~Lhͽ DiV\8}I&H>j 9dȳ4EXI`)qA6ۥy|tLLpth Ips6K"%A^zVGSa[zX -TgJ>vwf2+fr{ojKI&Z:EdŹ!6nCV*\,%VCD:*"91a2'9|f٩+dhQAK՞H$L_NAΙT-?=r*-_AsfmRe>U-~`cު$3)aU"_&Vo2duH1 iL1'xYD#׶qAw 8_y3]LeE*R#! azw#ȴAP24M+WʴQLK"*Lw{9rD'9E9L*6 :B嶑- ^dHk?eJ &ɄAfJI̟`1ZD c #bZҺ4ՔC0])c$ɲqH8>|7e+F6ZO91 Xh,$`MʇX$Bdi- S 9u 1:rrJRvj8_psV6ɮ7ʉ \apT ʥ}f-t=-z*G˭?}ϻWvϏQe(T=Y7 c؛}x+ƕCXoWW2/=?]_^|/~=SܾO|򠷷n#b?N0{:0A{J3Ȗ }i.n yUϋ N_þ\!IGٚv 6i=Z4*)Afm za"Ŵ!- ѳ*Π* 7L!KFnΘ{ph0`Dwxh =֚%`6Ǘ 7j" o>34 S/l(*'yJ-<diqE`‡&f]Yڟ&]xNdԮ3X#E|o [Al Œ`3x.`Wpz ^UFg ԆcqKs;ͽ&:g&Rʆy} Yc6rv6IjOEJߞ-or:.4'^jFILFT,qu a!VPYu4>m;%tU&66/U^*T`8N^\=_*<w_~`[Tn 0>^vǸ}?ڕ__ݫ ?n^5ѭQ\$h;#Ukm;>51 Z)u&UX`Z:@ 禨=90yrh$;3jIV(vk'DN,4\wH}`4m~A4; g;yO?Dbpso+uRߐ,Ч׳48$XUZԥw$%9;CX[Lp-ڧI%Α۱{FhDƕP9da8u )YԠL2rXmbN"=v24[49"{!r7˸aƥuQ3'ݐ3"pvull^=la(hASyOCѢ%j`Ax3Č箷hRZJc0>qDfsC23] [ R"j-ȼ ̻N=)LdtC'_Z2oa뼓W;]wOfl'\b>P(ٰڿJg,j\d%ճE!a}Nuz֪NaI z&zuothPsȽNJw2|X~{:0ggE{4 CBwdmZ]}3-$ɴ؉CL/rs B44L&{VS) jRؚ,["oAfq[$ctlo<׌D,3n?AqՂ&Fm6Kwao/rH毚F"f^*m#[tGk;3nT9~ z&>Mr>=\F=Iݫnv1<Ս"XHz%MSܼE"ݬVmU^4tUsdzN^]T9&^hU. ai0NB)V2cX9Vgq?K>=S-b 53Vз2QY^J!˧,_vwnuy&'!Ի͹X\e>.R=WaRBo L.b-S_JS OHQv-pw Re<(-fq,UfB1Xtío<͒BGR\46%pYIbM(>"$X46*UXͪL:De.|/gU, 1yJ}nZwgtCLN+N2')ݽ$ԡMCmZ]סGc?c%(gϟp{")sz1P}:CZ _$E[0B#4w7fΚα0]NZczgdw)͔3՚Z?\GDs,-ڶ;ÃurzC|bŘ1 i5+;b%1a;NO^i{ djF8j4 cK*1nL8p uKغ C=:L39m}*C>;Menxzml;CP SŚ̐5Yd`3Id$@dmAӸnYl;&GZ3Bx!r)±XUoϲHvu40K;a& jhg:p~'qĤR(p-PFQ<5kbDDVJTSQ$6`*Pcm!Pj2D LĿĿpDc!@P!w{A{=*ck?I@'-vŽR,J {2I%dG(34Da|nD{ܪ)X9il"Ig%65]0ͱVzuHQ_k+%[]7 ڑL?ՔOKU6QN'?fYSNdkȰc)2I91r]vty:rO0^6ܨ7jj@5Xkj(jb#:h +CzAd5Z!2L$ċƔ >abUyKZѶIT*HQ8XjyVgXavd=,*Y;kmfR8ڒT{t{ggL? 8 IXߵƝw#;'RHIHmH#ƙIZU&uu f0I *r泜Vj1TD '>>vE81$5n2CZ39:٘! éfnqj1q0;lׁ_{uPu5}vª ߑ CE2-W=B$y{2xy5`2_@*Ǿur ȩN޵}$'h{gyBXx'Lˉy[RWRGu^aеdp>:'%9I8&Q}'/aKS:^!sv}6h~GFhJBB*6KtCd#J;hh _;J?тB {Y<b&igK)lǁ֒,Wp8vx΢:l &ҰO _M^ uAG{TTc♫nn{տ7\fid-Br|<}'$f%2nZ& x> '߀W{eIz/O{LT:ԻXax({r`aI)$:=:TZx IVp`%k15w#%1 VhXn]Z;B"8ydqH QV?bo n j4H4DH[P:ZΫe+\h #H٬5 cos].{^ *r7E<07̎iG6N" 4 UG'dݦMkm- N$YnK++f'-ÕcNE~oNfaTC`uƲm DPLҿ9L)ny$i^2940'6-A(V;[-FL,![=cg2pc7@3!ɻp_]9+9,^ގυ H,e]02&2lDm$;_"Qf'ڡ]F"9UXz&V%r&">;L&9g~vXD$f=%%ѷo6d. >#oΒ7+׸-Pᐃ `}--ԍEalwMZ2rR&x$^)CYK5T:V igx޿ s>@gn۬FeaCSr.ZSnZ ƸchX"dzp+h be>quӫd<`<߄EvLi0|aI]^@QTU} &C#lR5&puz%io{a>GQӤg#ƙTD>TģrcV"XC:i/z 9W6(bl,2hl,e)Cqa*6eZ^ (omRPQHD” eSP={ zͯKhX/yDR|5:4on׭lб`'jJP0Q߭*a5RBffgԕ$d]5JRo@D)"]*T(~F׵mM^)6);0u”~٩@&అ}"B.jaKvQ`y~{ 귾jABC+]~yX>4JPm?D^U:g^=sr(4d=k{^Wm,-zjBx]fMw:iVr>k> +ԑ,tu5]j kt_KzjE꛵%*л-뀧J/ uq݆n[qk 4 (ɩrT:R^zuO/dbJ?^\,t)bW?^+|S|mN8͹t|1pG-<;q/ )B"҆bw@, oְGV:cgUHO2EJTe U|i͔xr[֊ 'uaٸIP ]ɜ~ZidJB-:,"q 3M`Pki"m.]o ᐯo'NO: Ć5mlq}tO jND cԝqXR]=2bSqHmX4"T+'U:KzIvmϖ(< ׮kXQ4T@R6K߬udl=]h#{l2I8U +UÓ7,:^m ;fKzI:;F*]N}Uf(o jD7`T6z?*,=m~qEbe=cXPEf)yDy) T^RWLķ+PW)Y*{^Y`YP܎֢@60k8oPD؞UoCyԸ+ kA.hFk d"Ȏ,([5˵ܵYN7%X)d ֺ0bgЯ i] >R߫ S/};zf iټR`<6ʑҊ?t*3Qt%75cDɍ`n4?E},ZtGmdueS,5V kWYr?L-)ҵgV2=+gk^ҌmEC;xk(֢:gwv`l3wO1ɋ'_='Ϟ>d,6|ϟe'۷߼}_ë7򳻯;~_y~w/o-x{y/}s_~w#?~GfS}??}}yxOo޼1.O^/~W;~7w%oECGq},ywO^>_>~}닿\?]g~Wcb~֌Lb6li}Ͷ[\#ٖE((O<ͤRɐ>C]J]eZ#Ha=Rm\PI #2 _29{čEc9eFV7C7ݪf'I@.GEZ|)TDX)eQ[{:8(ljC#YPCJHJ0@ExPN!]xs=5h*ɡ>܈[ KGSge FbBH_Q5FEBYkD+dr*ܢ"~X?_o ./(Ȋ"/~';$[)?`*=ېI^"} wO#\eG[v}"zRd .*#:Ӯj5S\2~r&vrZSvSBud1K a5'FBj+Ť{ȰNDȁ˱.Fp6|r;)O۪2Me"9EH@+dž0)a^.Yvs¨z2.0"RJn0Wf5k-a`8黔r)7_&"`"mwQ9͕Lk1X P" @b v.Óe"}@Z]7ÑD*~ Dg^"r C6>`UTL}m~$iL{ KRh]NzC&Q&뚇&42J}Nn#Lؕi!ڻvd/ vЏ5jHsUb1mnv;e`xlbcu>&ޅCb)զ"o][voL׶$4PZ[ZTޗrV30H[`mQGMPvvXE-Y߁.ȰnaHm}Ng|&hƕ&hA4zҳ ׁ=wmE".iz`Gt>&NƁKXe${>h!{:N9DE&@׺%~H. ̙LȌh.(qU*4+tG2Ł 3c:fRW<82!K}; S-G5ۇBi*`Sb{Q:pH&XF;Em:-,aC``K)6vU޵a+-N:[[ێ!Ze'it:PYU5#5HHRn1ڬ$8z服)l Np̯W=E ҖW'Pnb$uc|k o0fRʵ}kfm[56ieF:"١_e?V/(! Fԏ`Uh5]üs{ӄ7gڄ>'PaQqP! lԾId<>wc&0U0p OTL{f//?bÌcJqėcX]!aYW'USMzVio%R_\} !nKn}H:m5 yǁWbO)2T`ԼI$`[Prd VR k[)&t1\"E1&/iҵ%39P ot1z\ԪSydvWn<8c$0T' ԊBAjUb{''Ϧq֔x=vJ}=LkRXaяe-5&yzxv x"$+`?>"l$k|6Q;b\ T@Gb,} '2SgPx[$l}Im | O\"|u&g3k>P+}3ne  PAρ?>z%%-g>d qfA4"8տ3!YXSc &![0|̡\E`&00Á鉭cӕRN=A%\9 |0-@qcs)icQA.Rqh<{=*ia0%qPP6,y-Kͥ1TX6Δ4|JO&+ۀܼRǜ Զ5V5 'bKٟF?:b*>z@#nL8q7mdx`-gl\. <]bSC/ $Nǃ>ԕց4j~!q/O?yQ!s|Q`O_|y_QP뱙 {쿉a*}xC {T8KD@>wy!& QFY.:U]6U؁L ZO{6KQbUwO12R>Y.5+^V!3/0'ݩke!-nWkބ;il7I7okj]LYl"Pvd]]PS}};?t\|MМ_][ *#!qhQ+Y-;J~[k6pD˸^P՞ZU:TU>?CPPj Y]+7w $ڻY+\S*( 5ӔHr׋?p#/фJ$UG*FS9[PU1AhxfN7wY𛲄M/ RιD=-q M:ИVȇTo%m_}5׽֗3(ֵʏ|0>v9X8I:wS0FzuQ̡ex$sHS&!!5Ck*xm:s^"n[4_B8!jjo5sQvqrTSh7 '+Ej=7ǟ%rJ#&@ߓMe 9O~gVCii1Vq窷DqBŌ"3d.B@OFYv,btTq)tzhxxJ_TJ:ׄ۵U$/:8'jPX-L+2H1En3 ܒM%(tAS5Ч4X2{b)O :hڼCig-e+ҝh;Cf69r9MkYCynsc!.0O"Hܝ1s]FgHS3J6#X$ GVv(7+s($2f=J}f9%hQ(XD%eɱ9htJ**Y@kU$ˢɚuO ˴tLU<1 ^0Tr*97ŹHjj M/|-0&BlHi]sQ:)'%Ҳ[վK uZ c0$| ltgipj0L;,TfXmN6`.:lEh &C]17BɀiKg"O!3XV$E V{D_eu>7/>(">82,PpEQL3c1ӺFJ}e0mk5yCirX?kءd05Ns LJ%O-|h7v&Pl&1`K2n_mƢrēPpoPV H^ dlwwf<t'ͻ|wCN[G80e1P3$gJB0TZip͵mM|$[麇[XtMmN1AH J, X6}>K5dJ s:G PĠ(7]uضBU}o? 'wrL.;B `2I*! .,b;c{V^/D0k#\W!5淚}F?C6G-uj{x,:we3^~4rР%3๶"!+=^_έk %q:$ك_NA:Y-L𦑫/zqùԠC}[5Uii̵ <;Thn閣NrT^;h'qO 1μmPLȊl\s& p-Q 3Ii9Q_>ö TCFAbWQt!ěamOGѫ G#9#:0ZoKWdm"1_&}0& 75(vVm/~ ʵd:;g _녭1:F91Yژ`g}$qU9}`J8 sF=j7i|ڹgy}{n^1sxg엌Jy2ao7k3!g`:ad3c(fB|Wdff J6Շg"hgh$Ndx=HCbKX{w nE1BC(][[7~Z zNx̣a8Od7@eyD%ı-yoź}UEKx5f+K*}x$KhgenT.Nwe >tvv+2}ilg$|i!}^嫻׏1 h٣W?ٗoK-D/_<__}xw?|}ՋϯexRFݭT2>|7?>_?{_SzcՋdp{!S)k(|O_?|~7^M3{|?嫟MC7w/}ûݦ;OB}/?K~|tb{nN~߮~o?}J߁fQdtb.5Ln7=*OB$C a]ac#{Fzj]j ]k _ޗoL1"9:wXԿ_ X6ldTndai{k̆*_`"U,jA?`ɯQlGb:.{ z┵ QҸnK/΃6|(( ]x°iLn=>bF8-8ͲR q1Izªը*5pqJ*yGQ#ڇHIe"sGf>p\"Zj$[U2B\.छ-mQUa ]>Q dj!(mʢ‡:`TGh&amQB J4nE;KRn@CYJPieuZYζMUU'A]6sL!6n#-8&_N卟y]uv@Mz<hғ257DK &@o*ؠB՝G-H ?\$9Z;dW0ifݓ$/b2 "x#Ss9YD':D p,,`V)MҐ\\P#!ֻTU}Aㇶܠ>P,SeRG(`ǣ2PH m]R|k'52&*Qn*%H\GR;QCb+t%)i@YLҷp_%DȔ%_.|y`eqn}ׂr\@qYJVNJڔĬAWw2SLlrhgGRT*: ^lHIUVOZcLљ=o٪&$eF$G`ȗ5"b8,rK+xpq;V8M!6Qp,NxdWZ@ gBx<ߍ3W"jt `m= gI>1Hn7ټ [55H{LU KC_݂X#_lL@t^,)%҇OAKUr9x*GA2EQ'u%=)qʘĬ5~ij!iR3g>R Y1),COrMOK~XhvVDx#ΫhMUNPWhփGl]`Rq}B?m^)ZIJ2lkB9m,V-N҉3ŵPUi9VhzZTx'i+ -h..xfv!BK~f㖺\ iQHTSǡ#GsDpŽUU`Bqݛn8n96CU@LccZX#n;'̏dBGZYEPt(ʱG:_{@>+] I&:Pnt S՘N9f =Gf[Wp Ypn.^t#}fJۮ'UlWsB^ؕ&;DEb9,ZHaIzFwaeq)`dc2̬Y&A&6NDtԍ NR$yt{w?6ءJ 뛷w.~ v=B5L۷/[ן_޽lf(,GEJ^ؠyxnQEte ;y-[7j}Lll-B } 眥eDAE*[݅'YPUT lBs/FpdjSf%a梠PhgCCK߼H!z R(j% \A$"8x$aO" E(?[ID7# .Ǵ]Bhd>g14nV6e<9v,G0,>v@ʪ(RC\]EjQyeڳ6QU z,r9W*epΤe,^.PBa9!Y쐨e6˜YsYꯦ鉜Z6ၰG! 4 <9S{f͢*oMTM(pD-1o!{)xyX`I6+PB" BAhq7U/g5ͻfhY| FKC2 pΛF 'Y/[Kk!V(8`G&(70UO5MLd"Md+,\cLD(g8va^L;y̻y%5IÑ`WA%X3 v:^5RK-\ȱI&eT3<]͆C},M#'5P=] EO [<Bvm>.$IrȌ &)NJmIF|/iF=0cBJRSXKrX2'J؜:5,a6vnKS!)Sh:CΚ.[n.u%JjvN1>{@ԴJ `-+ːR2Hd*3sNd4cT},d'>Z셀'"r&4*y[TJ3$2T||tp;Bb[ZJ|NFWX^^ F,| pOpG2JvɑԚrZ1Zjy7z,Bi\A9!ꚲVa1' m' T(2MڷT%hppKY6os^?cǜs5mti/.6+shoef.6_-NLuryf_RmִH-,bcVJlxOE=7dXkL㓑lV-ПUX993::ccВ+cLۻcfEXrm>4 <~`zmJI 8hs3qf2fn{@F:JK.1];!ag#xl\MHQ=[=&gD~2\)p3j`!м;0xM~kI-ɐBhi4SsIzGN3<Ђ2;NmE.;"mYfޱL"̤ /2sy-)j80[Zx \?4kr'Qj`Z:lұs3'f3iŤcVcыt|ͣ '倦f7=ٛY>_8f3[`:9pU?4YY;Vz/յ~4>ɵm)Q ,Ά2]!9utF3d(9D,ށt˝2R̬j1ߜk+=.+l5^׵3Ԙ.I_li!ˆrZE,{'g<[=$`6'p)*3{ݕvmXEeWk[ E5Pr KlԨ [9d4I,F->%4 ݒVF~d풻}۠klбCeՠ n FQUBMMQ -#uZE2 d6@LiG!g]jfWXk{l?Lm]:0G6s $2fn$ H@^vb,x?}K2۵Ljs(AgA ɂW-}^/-f{..Bk408mBXؽ:4$O]1pLŸys#hb4W|TAoll6|})< x4ᑩ7jnr#r+\v#rYY(i4 yYTڜJӨ48"XsF.-ptuyy*tw,T%PEķye?뇳ʺ\q&8,*raCK5|Tиzq²buDV)|J%lP4(oN.a|A >9깪x o+=]its#ؗtYj)ԣͣg]m 47շOl_0 :gXh/Z?!zħ_Z_vZg/M;AZdipx*Z&` d-p4ѡ /@~Zdkk^ZZUĘ5J`"0Vîm(Cv~v/0(r7IvIФv-HP.lI,VVv/cg=(^8Qp0+:\/2+G Ȍ,V!:[h };OZ:C\HjKV_ 패R/ul};0K-%?'u17suB vVi"i];ƸLf/Obf0~7VYKJ]s:fC޵v_48t} =SH j]OZN@AIB`#坑OsL w?/BkI7;@[<-/:nv8x#akjrY\+fM SԵs'F}Y?iڂ&R:)c_iJ hjp%zXٻQ@ԿT'!p1} Qb7Q녑T1Fdm7<κױ~fs(E9z>T1WT h"Sk~<.t`)8rJ3cixD"woqRKw6FṞ̌T=ۙ '>[Ճ" UH]{АQO:ҋ&_fv'EB[ mɋ(? vQw@S$/VFel+vhԣ,g(I䕣S%ݦEHVlW:U7Ȇ׌#.Eȃ:qY3tvAh CQ&B4깺)ͮP,] L݀3"%6g 4 4AurE3[~f4zŅ0lJqq,єoYiOra9vݞQt!WmfQ)W)Pr5%"jYZ s r$MPxF )l\V۴і[zVb5B& X /NhAP~2M?'Vb5{T\ոK`5XS@5 ոA5$׊󮅞ѥ]%t)a>#]j]nsNdjB5Ij=$T{`QIQ: tJ-\_Xv^΁j@+f,|p7jbd]NRk7R@5{"fJJ@0B5˯^уe@Fi:1użi;ilt'c40@ӵ3;QϹ%^~N*{) MѪ+ ,_,/3jϨg_]=ܼ*| Y4A=ʄ!ੑLݽ&-94o|/ox AhhcX:jQЯObozYwjϘex9#957wrsrtZ3,RNx9c?{.^].,s<7G^4o@@:\?ije?a_?iyC8pPj:|8ö-ˆ\(N`b'PܜAKS眣vBPm_liΑp ,=hf1NJ_9G%59Ϟ3f7"uocR\ @gb#(M vd\KeDu:oNAs]ݿW]=n!bg9=sh0,;ı^Ά=:'/'nT9g>N*BC,}YTG3?4OMp}wdF#DˬRIL#PDIUw?=7~T 2/gG'sJ;~yϸxvx[cG -WǴ!?qe"~ΘO_ϯGyr}֣Wտ|Ϗ>fY>7~~ϫwzO47kc}pwu{k_nn>T:zxs/~?<}w`c}7ߞ=?=<<<_?˟/|y{{+07pw{exߧ<.||}W׫gf7^:>~Wݏz㋿?_]痣R?_gqx>X׸!1m/hK\[KaXD1R] J{#s}t<<^Gg0p@/YL^ Pa` .^pa9`pq1#]]~ԄŦx6az4hΙ1"׫yh?v5mPG\WCT1cAGZ$TC._]Pŕpn)$ArhR'ϋWpC=/VjYFzd*W#bz6(EH@Ѩį1T뵒!Z dB#YA[<jFȪz} nk'>8 騶_.h. YR ^:3qso\4p՛ͩwJX0 mjwftБ6S"KΌ!GG=™nY i%7Ovq̈́k43G36W2|}PIg'{G4a)}C7!_^͛wg<ߘ_>%7sZ͜=Eu PQMA%hr>,_l#8'$ ] #''*%\,}lIgߐV&;vOYQ B/k4p!6K7ă3!VH]0ŁBG E3բ ;lb̳Puk@ ѱb܃KZoWVRN}@t_z\8-m;6-#;F;X" xwnA"# *c]JηURhF(5?4CݐHiCEy bX䛌Lb "mҜWkmAQЀB>u:]۔ qC\fKNv@Z]P:.5 lk; Vʼcl[`-Ҹ%DRH2س!/XoK Jo#̬Ңz_j=,%@cB?b`HP4no ,Rf^p,^uλJDVdml"c"$-6g|0$18. n~{WkK_taymW|)-vyLr1_sn_<(Yy-cV 3W0Tze.ʒ ZbV\J@i+yP+"R^A.s]Nqip4ʅ2t9p# xK[lZ(PWwRʎbb8gťxm&9؂#l!ב;:;㜺9Lst9Y-\ڶX9SMja\E 58-6M/2+~Ҹehk"$p|hȇdPBEs8@OCk"% G3*tL 8e6b0!泥8:]5fl7x:iKeܕLp AcQLϓ@]EE&`XA ʂ8hZuZB&P#Co0E;:<"s֖U8jih 4cd1rd3S3 Nf̾ U2[(LwTQIIvd.zC8L. v}z`UpaƧΊ. JLmߵ|P% ^X;$;Ge YA,| l*;+MtHfú`qHuxYa-_~/PM&UP߮߮?\nNwgAӦɏ~>ӟ\Z̡B͹zS Qn*s/!曑!{ykK^lt%bݬ)UM;0!P4bugxa::؎^6^PZ}F[5_ {=\a7(|rM:L fCbo=GBPPc@BB-witD`JէE#q|fYۤ% +NFtLzu^yMP2?Aqc-5U.1"Zu*I^02d퇔^5 OD!Ԓy-\5ξ[N@vT/)x#bzGdq-XS"FMv:n™LLTOB@CØ- Z'S F"@ ESiB'CR{bl9h3 #u11U m,TB%%5(İѵB5j GMLj(P.$ZeARewϹ:-zF)3=ߢ0e0f#kůJ[Gsu81R3zEl`m|I)SnQ]u(:>sM#ƛuHvZ ?8FíU]7XZ+'x+-q! b,@270㱵Ds(t>ځl oYMB1J.הP2F:A:IzS@Gsɔ֣L:1s 5 :UMoXUe谇CtI7;L.е'\ Lzҡj8)wEp c ]h&Ljٝ#ggG-BZfZN@-5Ly&6KIsOx{bbݧՓ;Noϑa,4ct':CK|\Z_a7!"kEu`*jȷ`<_+ ,^e׻㢥|l+p]|:OlNCg Rqsyem҄ I ׹ny߀"k9m3ݖ?ksU]_X`l*R)O$Jfe+m߰lp^VNqowJ]p -qU`Gԅ׷Dq2cC <Dz5vHy#%yܪݡe~@7"Y0iENrȹHxݛ{M%:lCΉNhb?zLv+׈8BDE;ǎ&(ѺY $ZutcePlmj(oތ#6@.N"D-yNOؾwCREy.GNA4afp>Ŋ^d0#9C׉q8"݉22<әKx:3?nM*umNHy}KJyƊS-[!OiൟFN}r"P?E%,pmym銲ޫLcbІ[VuJ@.+O#BUH`\ۙYO6Q;ac٭ U]Ըm_GBYU|Cv=KpI݀Xw"9j!90wDz:3GN,6\K6ڄv2NDJ:<=\ [Z~M u }t5wNjm eNK^ݶS,k&X|t`y#r$BYuf\c_"~aQ?wYU\toC&Zw2ge>O!6z'jZ/I{;ǹCpgkvz~;J%$]FhwAc Bu(8_֒d?,֞XZq[=e(1E =gBq2k>s4 .5Sa{lRbj@S3+֪-SЕ.&|^=y}gU6gu*0'uSPt.ўmy:aOr)~r m]g|` :}`S*nDآ#AqUktrrTEI O#YT&Eh+qֶjBkN*-MW ׷Ҧi+jSƅ8mu { m{R©l뜹41 DQVM[ո>2Rs{+.5h<(e4J-CE84@^ԭ܌n,nm&Nͼ*Pn;h+[a&,]v"k4Ԯ? C)=\dWjB`eOP>ݎݙJ=N?8;ڞ״hvJR<'ÝǙHDiDDqw`T}nK6 H `׽aKZQp:a6z5:C릖r?RXI`z[ )sr#177#uSmChNۺ)ʰɛqZǶqs#|Zvx%\K3[w8^5}^Íhc nu ٳo0FiÝD::O/]vtdrFΣxrbzg:0u^WDo?'T8T>dL5k~ZX=!9bHce9QO3?έ9;<; kAp*QLsDPemZ'e2 $n"dyS_=z1|d$(Hûk4,عӧ~ѱxt,S'E>X/^vR}I{8 - lx)TK91)̦I{m1,tnr -uڬrQ%Ԧ<*}amnDy]]מe * B :TW!5RǪʕU"k*e*SYvzIee ۋKȢTEX IL%us/PPYEyJ!> eBZ:-U'*Q.ERoU$ڢ' @q\*"vD=iھ!>lIC5:}rm9 󇹉DJZ߲Kk% J~75+fGܑQlq2o.cW 5OSGJDma>*n}ssXrBR(J^85 $RH=ϫgE}-nW\quKZU9|}0ؤ҆q.Cp,Æ H^<6ӆLVʼ4oTlrqXxDC/aM]-"**P?- PSsU}zqc FUiHlT25͟"hx84&AW]Y "vgbhX-kSÌ" t~MzߋCU[!&LkT"5H*iڲ#5!ֲOY8eMד(߻oGPLa+-ʶ)Y!&JOe/m"P˭(4kK :96krTImi)?RD^ ۅ>.N 6uM1͌GdGFQke5ދf2]%C[y.QR5BSVO#˖2}ٷ )*l[UI:X}rEf"P?/z)ݩ3/cQ|M^lO UBeNnXL)N3e.Pn+ʖ%U3kFLA*qo{9X3}>fS \xGf,0^Ȯy"Z7i3=Cl_(viK^rirI%5%tN署ٹRՆ-byڑm~m/ F>/ЈK9?o\[)O6N)7L.`L>#-f~ٛ~ 'RaK`@Ws|auy*_TݳTGD&VʚQUBC0}ioGg`va?}`˴@hYQȴ.1YyʊҸǒG2?;x'cB˳guOSy6lY>H!>;I[#P&]JلRgVVҤ=+\Ê/9Sx>I-:}gwyCQJit':ِQtt;+鯀"mĜ i:MtEYFX0Y^, Oݛҏd{t8Gﱧ^*#a8!nN"u ү^-rZ!v"TB^/b{OO \2?~ȐWnyt)- t6a"q!-BJ"V:wX@ kI'E<ސI$ o aˋ)ecd=V&MY; ;cZ$e/b1IϋMCDݻ̯E{WxV1:GIGPl+CEz%_#aD{TڹL4m"+X/-C: iJW:"1I!eu1: '"@!8~!,:bB~nCl\ `6ؤK"5~ȋ$6oU92 WzGsA/v.vl6l{OX:x;,R[u a0oH[Nd`fQ(^DÍD w*"@]J67fIUo <NK&M;XnpjYǧ:ټ4>"M -Jʄ%Z5ҶE^CAc,qQ(099)x1 F /\UH(E!LcY7]F tjj!Ѫ"CFE ~/Rw:Y!G_ 1 SU7dhݸ DT7l A-09Ȣ]cK-aAHJXZziz7ԑ4MwY_- xdBޏx BƨpZ'.Jc0Q:"lS$l~TCN؎w-"Ӌ.OAA.:(U! LGP-x/i_JWE!EQE^Dײw +2|Sd+l {Ţ,N@# \40X!4}` !U14.LJ3gLUEk<-RQG%3ـF^Ʌ1WW4e G"Z_?z͓$'W~ճ/Kyӷ7~ǿ?]zO~T=>ܽ~U?߾1Ǐo^_|L?z*mCSWoq|{}i?<nOo߿݇tS>XG߾{w^yx޿K^8\~ß~Ko{}9_}~q7/r~Eo/?}BqB^ۊmxkân//,.A$7b[Z $n VZ0`hZbE+\hփƵL+$3UqiHƯtXA%.[+ByѶ<E] Jx5 &S)",bb;QtesZ|пoKD Ɇ.Re@hUq]twԣ7 VSL+W!sHMdmJ"*U :J՝-TZ22H5l F*=l"ͩ7`{7TIRh:^F-E=+-6@ `khljp ^MzDV߲zgנiR^2 )d2PLM'72 ;HoE|-4VYc!PD[4`!JJ^$zTzvO7oK8 iAUUME א,9-(5nTÑV v=m A Θ(=aOSzj^uX[U]pnO"0a`F ݎץ)CE, @22u0 +qxva{LD˓P12Q69 cC\kxZ02-vT[xG7d"O݂! 乸xt΃#AUJ5AvXLҸs(R(6%\}2c?E3%Ʋ8NcRUP2nPg""ak%\uڷ|ը'G!Xo:܀{`p\,*ĪBT,Ly|,n(a±c%ZMaL挬bF "3, ڡ9SPI) vI+&& y+9-P&B9d<3lv_u{85&Yd&nq(gcq<&TIY=tHPPOeR?qqRXe,nJ 8ƺy$%Qw4^g(wb%RISlX.Ě܀nJvҪϾxXG7Ic˭D$ѸQmPڛ`0(r?(r~xG J%(AizKIwz[R_?/7o.ѰXџ77o߾obxM:"Ah) wB / NT I=쩊G ldANZީ6')bpG775[@,IpMMJr/CRBxUY irLx4ү3/ژ$S'š Ʉ@i_f"S2cVͪ92lm]uAɹ2鲋 tX 5vH5TBlg>]j98IXeg(;SlϕҮ{ƲEhn*y1F9K֪D Aϴ[`;>’(B;¢ίSCL,9a~GD֤ZaLV91ӜbQ{b.#W;Arj6Q*$T!oPfjV\ϓFG ,U=2#!*|T.5hХ<x I!ݬАL?PjeSJ]U502y̪lacDo3v1 3D\l.zJҍXHgrk(Ϩg 7M65\GY L+KM(OEWlÄ9(9K =^̽(\## mej.RmsCu)1:W4VSAI-;QܟL/Wa2‹y[e :BeaيDdb:K(ls5i1LU3ZOT0OO23ɽ6ՓMYB$/n>||ÿ|{ͯޗ`}GA7%:_={xzysgB}_Ӌ{_eXB^ v'<`}E5~ FuChd:8u%r զ3MgsԯqP@+D?A^F'<. 4SqC-Ʒt&i)I@i}9P`i#nmy;BOQ k{].Ƛ c>liR7 ne~YA( ϛ,Ԧɞ:~;rKr.PDSy 6t Wg[pr2%WWԸɬ "2PX*4z6Pꖳ`ٔ0]1޷~Т2KD)2]3RV8 ͳ ip&Bo ݞg+2U[rπϔnlr&GijB&ڃ"12==$'8JI+4M:&CީtNR{Xr vu[o;M?y˽6`~c*%ی PѸ''mV#c0Ae#U(m"v(mgFtQOIMں+N .j+PBQ#=C2pإ wyúIZ" mqhy Z[P[̭GDن6&j~@=یɜTmּ6V^&j dyXGǠͦ@NGh#ig؟22H;G82c%&x3pݕ{RWﵟ%#M&tläcjXn>:<Ճ 8|(V@-`}6w€e0z[ u]C {!cO뽷 ]Df[JOj맺JLShaƊ~?)*L>N$,+`./SYT>LΘTW{2kUi?x1_djbf/jU2f_I@fN*0&jS@L+ v5^5r!$K#lܤ.G8+ =~]rs}ARc]MI ha~ZatRګVGv4LQ}taٵv~Mz[ ٩0WM'm(>9=yu.{x{%f-(ܜp5psun6ӫ鉮~Hxj'ƚ0[y%b*t<׸,꒒s̒bۧj74[ē$ *"NBk/&A.tz-'6u Jh[^shrA⫟D@3倡JGf1ͲHuL^&'^v 5$|TT9;b:;2D3KV4k~^l Cgس98|fUDAH Δ&MsNJh_A@S2wg7k vRc6ʹ6.jO!Z;ӭhCaZh jrܕܗ+l V ^]w!wuk:;PGx2Y:Y܆2۶J&!z967dŦ95ު]<yP4+7[$:(Zg^ePYNrFி.~.?@UU kE+XQMJ1,^7DA,źHSJTs:$6B' .?qb4gjN"5*ōjV eyVe\2@*Bޭɥ0ҴTB"KZS#n6:iAUpvLf` (BN=S| c"tl'^/!jzX1ty%bmLFt{󷮠ݪ_; dc(kG!$OR{`͚Wfw,[{1NPTgی Oj{щM@$Rܥ rpY\ц{v%|_kx}N|]"<_r~`IB!gr3Jr\nOS yMR 1BWj LX|&5ije]6@Wcm'Fuf(pke/di/3mrw(]_-\gre2 a=gER؞DAA'{*n\9%13t;fʈFE.C䢙ď7n$Omx8r dRIAqA4D־5hflR(&z3BڎZpvmF]6룲GJiilݯ$'c?S_2udjȖU[{=a` ]Ōa781nm{?+'W@VK[!ugA/WN5 !nh؎q[+qQ찑9Fob -2Z\q<{ZfpdɦmAF-g!$E$I_'eH[p@yM)sA4 O鞐6"wٝEi ݒlH2  ]('N6m1{nNpi1(K'IN>SK**2BOEﱩ`t+ N^m{fK_eŴ3dæoKJ\hZ٥anRKu BXZ\8oMIhuS)3K0\t)7PkXTLܐmcuװS0m~P&Zg :&H_{|u, ({*a۲ ⫗⢣7A&vokt.}`䚢.'4qݧ:n66$ͨl'r132TQ r2U- ڊD@&(]^lZe jNڿDaѥ9MbeRrL]40+|Mb8H؇N>L֤0 \5 =͘ 8R/١w;]+IeI]|a70*[ Sj܊X;z}FY=H܅r7 &:&gS4tTGoeFB#Հ&݅uhjfqї7V";)/3Y(]SAwDa3 bk$,aە~h"Mj` m!*榞0a #Q4-(7`nuA灗 ЪjJMbV%[` wHGzYzGȟY,"l M)/S2_G u|QT8=:USh'˿9yL?y*Os~x~"8@d0IwmPz 3E^v3Yq4J_z3_ohrMgAJVO`~{HK9up]am&MzjR :^4?P~z]Tma5qCvmG ltȱ=w' 䝇20kL0@9Ĩw! ZID)Ө Ql,#YhJS.9 WʑT4f̶jjf1OeWv9jh.p5E硣vЬ;^}9^Tm\̇hq3w&y8cCunٻW3?K .. 7 4!j'IZ:^P|v }AvgaE%&R[u|4P]nqiQ9h%f7tA8Nb۟eW١h:9_\Z* p7LPU?* Mj<Ӥ戊^5it+.6fҾI`bM cNN^m#}W4c7zoRHVQVHwrK M, |.̡ia5J Ut`v0+c;{~p[w,9h=gzBkP+@ٜ5*vB!Yіޜ9(uGZ:L5tn zKp`]? n^7 K?]8aJO&,x7G}il/{ڞYӓȱ~,±ZeH}&l7ЃBcp9xPHFJŘg~Ȳ!v`r5<\INնfЬ@a6ӣg|PPf,,E|[Q?Hgu &:/g)ewԹl:]|ærڤt]Քׇ y,.Xz/E/ &î\#TPII[cQIQE[_OJcE(_EQ /zF;F:~TOWOS4xW_-3q9hKFޥtS&+tĽ%ЗÕt@ a{U]z()J £1]+ڙ14~mJ7"ND6/ tg8!'iC姺\| I. Q ]_h_Mu Xh XRzR`J&LUB"SC!bL6i4e(yIuiA,rnnk&ѫvs_޼65*/3˜{>|1(%m󲜓[xƘdA(q9V\[˿ r *Mb#rt 3|xKDC/\?pڬGj.+{ "'g^@-L=6-&NBj[p,4e1{iw͊tXhtCNlME`(\C'\6H/qR27s[4EI]*A3Itp5 ~թ,PR^  UwqUmNzHݑs_Ue@Ŧ\QJB孚=U17ѿY\^.7)o˞Q˒DQRt'F9>M]3LbJI/Fym U5x@ He~)H^J3ebκ'&TR8#S}vcae'Oi}|}ݝ-~5tge7͓.p""vlBqWbfа+fOrRc%YlYm{2m!һ+!gl4l?sʗ66S)ǹqn;-|#)=+91A&NF {DˢCkO($i\ܵ yic^]QqQ7)N<9ךl vۨ a#=6C,_;gMD:SuB<W/q 4%}11]!x;1Sk>_wz@%w ;7wn~}}۫w7wXMrws/"4LRAro7oO ,sj_ =-teU{2Ҝ+c=`.V,4&ms)5J3ٖ|OW Mrdc Ӱkoa2zڶ}#=L[ ߆՛6gMTntm-P̗54؈^v"ƆzDU,Zz6Gj۶sՇ3 閁I2X-QGyfT k:o 9HU:c𹪄6s9<eM})W _H.,pA[fg3`桖CMhgL7]ʝll]69oڄ qEJj}"E|H&_hOAgNE.)dq gUҨEDi͑4MFfՊ *fJwmmVN\lGteoaJ#HiyzmX䳳ny}!!*UHL\k qo.ܾhѰ!5ε+8+gWazR$e|mA2t3ɃG6onP @Pyg)S,8FxAu<.= ڐVRqՓ閃qs]&Ufk19,a62SIВ=*)()1BZL fP[َPk Sv c2 {m᩵gn+b ")Z{$B jbf!\ {ԽљaUp㇕4T D'AUnPg,R ~uZׯuϔ:Rn׻!bhєj?l73 7hz8 WbҾRX;ybf!2LʸJ啬PfC`BS/]PvB$W.-t\/:1;̓CdyY<]j⇲^u JjT޴2@XOXg^Hj1YDOElI4DSngNKZh}PnR]ElIzB_͟^\{&u.gg^<;_?>;󯿐gᗫ˷^^]\?|W/_yWLx6T^?^\߽x&|!<;SKx囇g.asgϕS<xϻ_|7/_?<<|^uus}}aEớ뷗ֿ~zY_?.?|xOoo'>?|ǿǟ.H?>_~՛z8jׇ~8|_zo9^W?_>FZJtl4 ~?E*vrY$EŒ̂۾_#F*lޯb-Nc4URhm N^k Mh՗#XПEF o˗2GבBxWEB4T[y"BT]wgm}yp䂑8VGE >xxӢn0=*纪ѕF0U7轣]%~zI͐%4h͏x  #{.R 9n3~Wv(>Xv&ϧ8)vlQ/ (g!e.?ٴ^36dI҇ ~y,+B:M{rƘޖfx_ey^C(kr[UGZ"ʸYjl̓ Wdc!ʵ!lNMVH0f7A2cL Ɋ '`1`Qqh8}!5,ܠtR?̿ ~o\|e$.O`jFX¹mXhUBf d$})l^MH٬YU} 5uƠ`풏IG-)3DPKpmOwU˭3YVZҖMC=jhS,?RD! 0PD(K(5AQ(IĤa$26H9!2qSz] $6#&9;2#e^;mx,m"(.J.| یFv[J ~uj< (M"Y8;PfXidSFj!ZC*AqwHHIU(ѶhŖ$Lb.<L'[lZuk4wG1JKrX4q4 hې`_I$b0" Y c.M8lr.)Zu$bV}rQ!b Z-Cmo,!IRX&j'') $_T\Ql8%$D8Ĉe]<[.`D간N9t(Q1J;1"pcr9澘Ky~&Dр^c/Zj7w026UC8 X53j|=FUUTtd ɠfg 9T4U51@6D$1S0'=:AS#Xٸ [Z! M uvR +RWWWZ[:Ʋ2*}=y&V53Jb6=' _/jX4g7'1Rm VлZL)1J{✂նRaq*^C~̳"h fdyEyժ`BlIl# 8C3~Bk09a]POP[Y@+LvMIRIaL34L(TYcSD?Ǩ,ȸ@C&CsIeԶBi?[17g<6G"tCS5l!ϱŸ2yL2"ffiw.G>ݦ*,ϋu2S,<:ee5?I qy\iܖ{ChPKY=jH:P\VܙSLc)GĭbHoPcv6%%9/VHךsdb䟥T eIK56(Wf]U;OzLbI=I΃m> s0CSYR9S .`JxΡ,D$n`mx$TxmaΦHGy:Uw4g`r%(Qb]<Kך}iR!-GS/*J%ڸPkTӏdJ2DQ<qEj+# hned !=:qQa =MGAZA*$V笨\$e1IZ!oO3:+l;^n`"uf *8O`1ރ6*áuٲl O|V<{vE|V1Μ ]_z/_<|<{ۛ;Nv vEjgsi}VTh}rPCب{Y}R:ux{PY-ZwO眖|j1j4}mg-EdѼ$n+LxuM[hOYYe7ۯՍ:2[[ u},ɨY ܘ[WV:Q K@zdxvo# ?U>G9}w}q]%]M,<ԑTezlJ]Q':loc]$K=}\YY^[7;jMo/yyK~}T m^_d^Jq`:ܹԔ:u M4 O]v`O3kHJcHxyu9.{D9$VKV(gR2E/(AyZ 6;uL_yzO l}#Ͷ:cxY*S:{N+}oPAQEXnvm;bG[IaO51! i58 fK{4A>40'e>ͥu$1GE͒ɽG8ڑ%KRi4vCMq=7踓r'{873=BU 8&Nlk:u"rGdA9m/hMX9v'%8vi'DZ_v:]-(kzR]OD_wp@Qt XeI䧙g**Ѽ4vOҭcϷkT (s//G' %_OUb>NUٺ19YݺV,2ۊ^@ O&ͬ_[v =DF>Xv=mwd¼'fط/{,6ph ֔rGhSuRja&44(n';)t$ّNK8:k-,*6Av@. "/dڛ>uzNs;c'ߣJT!5&dQ$gӞNE9{ɰ=fy60B{<&IT sDU;8VAj/'%*aCM7ZG7"Ru#'!g{~yWEt,0|֥DQu;HVr: {.5s;CT:M/'wkk"%i1HsCÎArࢎkUO7D12]EGȂy׌tj*Ləqּ&ZC@ӿV:a=-TLg%5`Z""DݜVnҺGVY\8vp C/*eOBP_HK˽qv5.wQ2Dsk|Ts\gu!CZ bjqeE:#<~ݛ vHv:K^bҨ1=#V}<R҉Rn-l&Yqt{DۛDi-OI y}IocqS.Zu`ӳ)TI廧_~<[̑S,7,Νf:[.!CnH4ā 8u-7*BkǙc=B/B>`'tsE|`D),sJ^WNS4wo"Dl N @(gKP#jGG?_zj,$Ӵ* n皔M5O;z3{ ꥾tHkvB|*z)4@OT%QAsx4lk[Y],ܔt:잣ǔNo9?cb6\kÐ8 -Q4^sq)=hk9s{oV8Rڪāk!`=>2RÝ 3H 969jOQtsHI (:dp"ԃ]&v7IU=-K>*~(&Z(u䖔kS]4iQeg&Hm)KD_AM*U92r+cOPsS#^KqjxhNC&)H݄tt.r; QEϵpS^ < s"IhШxZYno2$^[% bٓJt=ftPtqsn.§S0*Ƿ($ڥ>>[N=nHmiqQTO< ,ѭL|ByFTOPd0\ܔ{_&yhnRLt0vuU4i˲1,lF8åRwJRzi^RPJYJgUb] XE?XTX g6疋%pOl?Y~]N=0ŗob}ݵ[߇uΟֿڲΟp8zs֙^M {-!^]A2Z̉Ҧ:TǦ>r;;%8H( EatZƔ)As\JT'8f5A̚8d9X#":/8VTE*!A1&]Nn* i0|b>KHKK /[^r+"D&U׌k9Yz+C*.H)42+u/0i?ch-qyc!]pA.d)åZj0 iPq%3D,[B&5`b'I~LNmnܦc$[Ul:3 5.~Oh@QN Sz sD;;#t7cT޷LJ|?8 df KYo igtj#Zs.]sL0  :׭hΦ{D7ز4i;k4VMgn/'vZH &DK:K(DMsR|^ulO:oԶ O ;+X > /m&Y`&agm<` &-=7F >9XKؙ, l, K&jPhW)t\(7xPaQ&I`zvfCEMNڭ_q4<8g F άېH"Ih;MWX|<-i.z^2r2[aZ!ڞ]^d#J7veH>P8tUh(L+2LV)깟3~z˧i /<==|Տ?<]Ʃ?^ov:&ݯ7SY߼~=۫}|՟W{t?wopͫ_Mo9M6RDC`}Lx]t]VsI.s\N+xk#\j,A`[򜀲{LjH ,` xi"kcXˁ%1nU&cr&DpSW+Ӄiw=1J-AȮ5 éLzyDsܯ $^|7wN5m28޶ee;j!5 3qXו{k` p]҂62F89U`t4:l QrVhRVR4@H#8{<`#ΜK`{c@Vs,x@JVejIZ p7No(rd%SƧ/Tœ!Ad!(2ݲ̼ͬiq!{%:EKGK>}zAI5H2a$I^G>_u6/P3'7np9]Aym7CcW ڏv_wDuj/ӱOYpkP]8rNprQZš7[za1ը7*h?t;lb,3ͭIc[hZ=a[t n2m i1(08q4L%;p)Μ$=ĄNc!A`e& Aaˡ>:]:"7r|Hr] etJS^cŦF#pR%lGc ^Q"5TJ|8'>[:Ʀ:FrH}@>sg*؎J0Ԭ YgH;2{#wPMϫ˲^Z " &\q`Y|G{9}Y H9IL~HWwᇼ2{F쉩j\*))+ t 7Xf;|u9!0vg:2 -f~xy3dsݔK_a"uژm ՓsFi]g7u .b=aـne<t{KlTK,>Z/Qɠ|(3xic?Xeqqk{bX\i&[KJ{i1p hvJ+>48{#o g헪 z]vN ڹ4)aS`vM蟧:B䈁Rbi#6쯁yU_83rhdv3L%D ^&( >^c݇-SX(";45sjCYRA1ŠXXO*dx$߮U5_bH7N͆<<6Bһ\ C9!k?[ p^J10j .Yw_^*^PLb8i((U^<&Ssk\\YԫRwU~Ͽ}'%X*WT7/wߧ Jq; FZF eoVv ËCxJRR:Dp9hg ɺifK+3>%+@(rFYp+K}xƧP¢%nu;\TkrZbXb`PB/ZR㬢" AW큆zX@,;OPv),b'nr #H mP+a4 +sI0PZlQl-VO0ԕ ;m1g'n~!B9dQt:O2 jiv. ATnp, "Yh`wd lK0KU) ;oN?ѦP]U.a`exbI֐nͥ9Jt+*:L0U{<LM JYZMSȄ ; [k߶ ;MTj-k5-’RĔ}cЃz)IB+* m%V $Ra2-Ez9jaFJ*kbGHȾ|:U k==p|jnRvrn%p/:kI0G10LSW_:jER$  z^@ͫ%":YNUhKB$(&{VM:JJemYS<զ U'F}a:pOyp젉PIޞ8*j}؜!/]洦*=Pܖ*jm/5nhgj8RdM8 d*HBO=K]% :'U[UNib 4qI" Wke [bP``Ӗ!t-ɒ72bUg9VDm,5'nWM5I,7XXhdz _k_,8"mє)Sw`I!)ofϻ|.uLǴJ | ڬhߴҵh 8"٣oQk-.42f+VMBFlMghď){oDM ) _^BWns٬q0;'Q;QgoT $g:uH/A-po>\?^|.d+-A0_ه9Hv \Bs1Vw&ٰ(OsIqa`ҁTe?j6 H 6ml*2T&1:(ӆpg<JSDQ2gfG'K8\1 }.hei8*r%=eClh-ါ$4yY%SPoY(lY*Lg1t:vKnS$H2֦5Xj_ W[!h2b2uR)8:MWA$1H焀Qo@B1g T xwcKtsZhL.I p.!X'Cf⩈5cgP>fwLI#$1śB&\)fPC!:t 7)H/Rʒ vuy~oM6aج\mP1;tDwHX GCnh3f-aX/6rf_Hd @haq\քỆk>%e6li\z:Lע畎\)1sE }aثhH5.ӑ~MLw@ rrXy1ɄC#c.Κ^*@+:(5l.l率.2E,+wKJqGgPs̨8{ #7Ç98xKssÀ SP4=T#zaC4^SIi q>5y;3 h"K$wKDP`ZKomHKT N"8˶UHXرYP%cEEiPE2T>3ErX|Fz@/X,LGimZzvS c92>k®Y+lpƉuYbL9fyzZ_?cR%יԦYWvJ Mq4P>FUɵ|6GTQFT2y[:O}zbۇf ",`X!25U=E/L/3uv w J{+iQNְ/ؗSGł5g.UXx{ʠL#Dk`[*D.( Vu:w)68Ih cF hƚ]8tXu$2PwNs|EDNϠsM! a,S}hz8 d-aB7C;5ݷ W!/|_?)Yofɏ+ԃcNK+#8n3;F*S]f?~SA".%S#S6r%PVa-jJ dfQ LY._@y]{%/ʛuiXPFѩMC30LU[6*uۑ6CCso7[ۇ1.-;89da3pڹ?q kOXІ<0#BH33\OLqpC&6`o8{tq=DCT lr=O.>T7(ܴpNNp!̐BqpKT(*=Amˣ~ @" osʱ e%Lڒsc ҚcJ+F+b ). Ykʥ*QQ0 . b2ePxeњW#RjaC33Q)@ \îȫ ϸKB1=x*njÞn0 ogIBDNMz &D6etʴ=,*f3x͡.H-01 :ce̴٢@`4eV 1c Y9fW]H/ȄR>ÿMx%,|폵/<n<|eN9uA,dmD.é!41K) B*t-yT/;lʝ֏QV4Q* bC *xch,! ŮΈwIZZnym+/U&oC64/KiF:T@ 2hU\JWBH?+d78b`#Agn~ vF2A Bfh9@7lpq˸LxN0QqEj?%T}$YʆȘ9rYh1)©z,ބ䧔 DR!I l*$!SCΡHG'+!KHb$Gڶ𴅪n1 [dYQs!.J)R,,jM>VL05V'`/nB"sA6%Ry=eOD*LSZ+D >v䱛ݰR屻_ r7JE^ )mDg#´`P n[#/r}>KVB"jyT," +$mwFwh;^yfe0%6C%k'Q|eɽ0hEkQDR* #nbF䎚Ed'9\ sx-6;Ld0(3`y2tE6mHz$ms{ymԚEY VIR a mق"yzAy3aeFL2 *Y^Ȉ8ȉ,2F d'gԧMR!q1n-"lPٞt>1Moh [#c!+{{.uc8 oH@rYҠf koo!ڰ-˰.M%p_⯞;7ןR;XNw{u{ uOK bO^o7xo剝|:bU/>v*KP!QtTSlme&TlZ B^fpaV Vv9>ed$8QӜa-jY0ˮrD_M4u} E0qY'\Ig >;"ofV~`AQa&]V|[;;,%ӿp-eD8RrH55)3Qd#|PRʝR !g'=Y^dS6g'h*ɚ)cf1y$b_tn4ޱ q6ܱ /iikMvB v3,lX5I_[5$;>dx)Di{Ux,;HP)erOsBls⤽ mN@ [tzċu5H}|τ^6, ՜Y2@ݞUu5eFYFv6<&8sYIHʟA5403[.,^l#I.1oh5\߲jF6zz} s3XLY q&U:65Q{,e+5s;Jݶg_Y " R.zEۼB [tH,op&ꀠeHy nDRMWE#dd|SW4sr#fniO`b25 Y7H~Q^%w`^ hyCVۼ2S.Tnsx@ m 6]UjQ &vtS'E]oVi2or0A&|$ Y9qbḅ1[ˉ\o4$˽`@q n`#2Z cpuE^" 9rLzM&1_߼~x1* `5깊Yܪ5ß9V*I>\?z㻟xO?:p2+{6H Q:q' =eۏi,Gf6 (e 0A0txe 2jŲZ52|۰khz:rN|O3t\c1H85.+ ѻM.0rŠML> $n+(ĜK @4}p]N,%M¬ =i^ Gr.mG%` 3q`tk-[NPVɝ 18`?Қ1ruy,H'&öu ,t] ZQ絀g4Pk@-+$X`=WH& ,\5 DC2 0R \\WԞ}^Qiw5xKH\4-0Ȱʣ&Kse mDFg)mw)7> ,BdA ybKiC?1<0j7Ó )e ϗRn,UG7l^c09FX6ǑN 6+(3IYdģi(q a37^G#lbBæy\YԷjd- mBΎ6<Ã<`+lս3Lξmun@NVܺPZ~3} +V e oBspi' t?;֣]4 G=XgKH(47s2v^ 2jzF0kqϳÄmFu9]'H d`B9ͺ[6qܰ$Z8l Z+0>"PeXX{%դUeļǻ}'\Ixr<},/7ۓg_n~9`?}- g?~W/ows_}pÏ_q/}//_?{?7~9n~z)̓{+R<<˳Swgow~߿~s07_Oū_y}߇?<yWo~o}/^9\Ë-\H>?}g?^r{w׿^n .ۿ\~^nz˿] .o !uwࠏLw]ЧHׁ $u IipDZtEbDN7ꯃ3~ ezxg~ FaY,YMS5RJ+z3 ȁ<Ǜ,&h+ 9 W7: $z>3)9d4c>ThPTA~ ֈIFh!8!MINH%Cd ALBmQq-F`\gGE\w(4HJ W -<]|NɈQu0}KxD"k^~SY" D"R )[A%T߿QˍtqpF4pVa$x:ւ1  Q7| C̰L`#7NR$_mQZ+f,"7mznb(0UFGҧͶ)~L͌H5 A+;JI5pG)eobk̄P&5iwˍ*^O"!ڍ #Հlر5fD`g`k,$DYFAR ifFP-S  x. YRUādfVTS)aÉ}QPc%יYJK:6[8Vl#azܘ\FI ԉu6Ii:%E=Oir]l%9C.o:a,`FҠlen,U`eeDQSaS2IXํ_s+fy|K~ =OSr/:?s5M ϬȠna=*YS![5Q`Ki{X,68J-"f&4U\}kDlMB[0Nj䤺frH͢zJ6آ*M3TIfmN2HL4pEHiODNHop ҾL$2߶ J"gJB+-OW`ܵ˗D~ 'əs<4-E \]TnKW+ Z5l2aqY$&oXVDߡNpMACrxj8䒝;;=t&$n!43AsGit]JCҶ#hZRv<$M"G%514j`h U̮;7 ^24܇j $;wT^fE4.KXL%OF`:ehUBzi\eg7•64+[͈k<39c@0khؒF7%t!GO:'p\Y"uCP^D;ΐ1Dv3OsN pQ Q rz9#L89#vebld< s_L\ P "J];DΜ+CA3W- 6S1MX2}ə6km'g wv7Xr:  U`&g PCnInC]+Վ+r2G3nE$ 2IpDS'"f,y1$f\"K3ݬ.9)/-ɚ%dfcK/uMq̤Q+f&S$3C(* N _xdhRLLn({U̲eͲq::j;g,ZMuyIcxƢ͹1gS߶DSZ(Spr|ne7hM̪/nh A,UUC%F!-㣨u({%#iȌL9Ѕ cI٣Cy8IdQi@ts&LOe&jS Ylh2p/O"8K cG&|Tn;ٗqD_>JȲ6gWIuG(ze ZWʪ*98287asu>jm&Vױ2YEC C9SɌ[N}aK2lך1bVj-+q2%NYэzVF+|V1ۇʘg\}1Lce 5h=Sx +#3:zɞfeRҟC{Uٌglf̦lf*0In$CLeR.;RFf:xLgnʐ(~f)'u,Ks^MT2UJMCsi5cv")>9=mR[2IU/ zm:*q؉Q+]-^S6(sާ-:=tGi3i aݮWDIZ;\1YJ3-JR\$ٔfp7~$=C=3#䓠6^$f}>餴lĪΰ6&X䑞!Msekv|Y|8zrYwA7)dp8<1sTc13sAh>/l'e1=Sy)ٟ!SpF_U8ԂTq) ߓ4_:PN$Rmls-?#֣H,PRђT3$h2hﺛ Zm;a˪ȶg[4]Dk; .EB*f,u\poFJ{߮iL.:p'~fޣu8&3AhR,WKԒMc~Ԛ@d0]?BJ%k;4%aGff w 4j58u33=o;o AY? 35bi7F4fP0+%WzYaM77zJze f׬ÑlHL$GAyNVxP㙄0Tܦ7xIӅɹ fgXlM݌j9Eg=KƚQaGГ=K; _)ko2ES~Q4|^?$ qbqF]cr9M5<5X<{Ҙ4t4v7pOƃ_cHxgqy?u> pSgfN>܏ݗ/|GLݔKLqd,Y A] G)Q3T{wS"JC0ݡ!chLpD/%OS CX'1PӽƑoPj7պuNЩ8:Ds?䛵cۧsjy!Bl=VHg(yt(= B&)4yDQl0 D}?; ɒVW]./KWA<2n:T Pǿ:*C^ۜVXWghgO%I߹cZMNNX&-F̾߀ p0Np=X5f]ާ\P!.ZP%d g1YqmP s-hzV|ڱ 1C;Zf7}kݑN@:}P lhj}7 VoN\fpfź[ 9'&z$W=rO;zgPMRgtrotFWB,eDdFGD-s~&PvN' ń@sEo+MN6w#|ݪesӜl 6َ=ѧbѹQi8D!0Y:u  ;2?(]AW$`5'n]AĦn]gP$+~([yCmՕZ4yQ '6pMY (tά)UrdљT{ݍ4VH+O<$:GTfQS90l*/,:y׷uq=.&y)lԝO=Q_!Ua!i۬2zeڡ{6Q?}j#LToH"!ndH-_9J~q]y_ՉKrlx&?C@) hT$@9iX ^{wcֱrLD}:mOnCih3HqΤywoݯoo2sS~Lo>4SSxr]ऌs1^JkgH&<31sIPv4~Lqd+ω'N`N@G/ò݊黝 S͕}ӎ?N{*T>P :Y.Op%055hÄw,LhY!Wc9ƻXsFϱ%Fg 0{Q.j{r5;sc3LI|Ky QZ0JqiTŁۈnL M4֢kkUH ^s>ġ|}+h45ީe%-BO]4s;Rkyv" j<2KSDD{ւqt&nP ISUsfEbzƉk>3KS}_yCMai3@sנtao.oC!hwZ,{,ͮf`i=궃@)"RPg]` 6M ҈k˾+NE`i8zSkʹ\zF(=9<zU[3@kk8Xm4TB9ȁ Q6Yp_v;2C 5PKE1LDJߍl"]aQH2j=)i?}n<+`sFGa(TCAk590/2*$oC+9S5ZLH.!ΖvRze̗IAEe]0ǁRJĹCeC_ϻ.116cn>K]3ĶD}$cCy0cΎuCB "ev#F/D*gs4@9zJѹԄ̷h =MBR0#m쉏Mb(@ *$mu\6"[;~jl&$s\G駅$*zz iCi'.D}wcS!ĞGa+ ]dmovrNC',?Q |L>n=1ȅ1Q`#iS< 7C ?p yVmNΞh;Uw9T?D#{h\_u?r6*;r6So7ƌk¡갉JpsEs-`FΆLRc>ѮlARQKy]@`"E="J_ Q ;/Y+uxJA(VwV R.Q;G񜚆,oWo7Z_]"@RWHѥtglyyd_R%!CK[+(#>xX"9 ߰u.mF+ssК>e7 ]iw[L^N1@{I ΢(8%2% fuB@"N^gЌ{MIYoJk3s/ι&\ι%8DX;NRUAE1THm, 6m.drD[ete{4Ǽi` EїoE{ y%Sux63WCM[ ,ވhQkZD䛻jr'tf<&!F}/jбa`V2g8! )$jP^8|`^,v>2mg+g ]GcpΨ GMY1G-/z,+Q_ϥ! \A-ZH, BGQH!x9jiT/$gӓU6ye*`r T4I8NAKaW9ryt> spz,P &w(8֣62yfvEBZD2|D1{9ig lx:t `5rx!\eoWJ{յm163U3+ @y(NkfZP$ҽ\NTALQC5N1K}eyяETQ_6Zc0j: i#Dv~z6!/es-G: !LҳlS͇#59VP!olwr:89W`@rzƁGJH>O`N] 9@񆃮 `6w =dWcuÐU~!]jqj& w*VC?LA{sR!#K9dIok8f!EG׀NpQL6{2R!NK!KV1 b EsiZ <Ɏ27 ufK܌x*hH$Cz0̴I_x(`u.@Ɓ,VZ[(S QP _4c!G՛io1$I2Q[t"bN9ǡ3CmVp 3w{^ P\$Tsn[ĒůCpBV+(vf-KG)^cV/ PT`ۣL3%Ew+dwP&Umu*iР,Np ׉T/@GJ7}6i r빽}g៛!swwy&tWaeHw^?w~OBMQ,iWGN߮r UU-rht&˱!  ɒ@[GЃ[hy+@ًǧ-(|!E)g^xcNfZe|VχWOe !ӿooo;:~3{ r<3p 4<`MĘ.9B:^HReǶŴ}N/v92BCb+}YsǕ3p=:4(t?"$d!5,&'9֭: cPK.g_< qG1M/Gy?9(çVR_|%j> wᚉv G{7Rp _lz(|6EǪ'ԆAL0% …1(i 6=X:Y(^3[.!T^qوt/uaaM&{_IGx4hk@胄 yޥ2?:pLRj pC&{?<\ma3u=aaa…i6LFA&|1W\/ёf%6F (^,$!W8<#2~X( ^!G@T7UG m$[ Lk<8=H[ҿU;&d[48,YI\\C 6VK[㞷bҤʜ>NGFA^HSi' fppQX='6(]tiW3H @"I5b,shVd`KF.Hxvvˎ}pv6O Rz)p,F*ㇷvu}Lh$g.ןW_iw_F _ӏ_}wO?śOo~B|zw?F(a6~?KൽoSz/7OW/|xixzӻ><~Fw_yzzz?}|^9<ކ]~x1ww's.|/wV\z_~kׯn|fyD jJ7PzQ4E ".= Eh,PR-Y|NFAi%4_Y&˰Deʉs $ (Ք`M9(TdS!XtEPsl& 6`idFT5+Rx_5&ho02g2Bc(Q]OD!B%*yagMm-qKddh&#xHzM82#NYEB;9<"kTMe^6L򆤤hKT}~1gp,pJP>gFzJߛOdety$0!/LJy5I3x!A(ZZDTᇼhp 6z.6vk}kML5`S;` s$.A_.D">k()D-<`Md4 Q@ NwNу=]<>k^#qP].ADCv]35"OpDTdk'l}N(GU;,ps}V:A9h[MZBH-:p r4 0) m6QN`t\ D$Nq]0[)Z j25-;fpirBبA)|K8PD,LczQ()ļKFu9p|v8<;O1?=q_?!'y/m_sJ/'!_B:~/ŤtʰbJ+?;i_M7!N̛Lj)UY1Y#r.n2'CU{`ae$9Ua Rv`^I T Ф |yZM䆝e-)13t>V7P j+wH/37E@}#93L̡+N@~4P~_|>hd4Dt=T$gUиQ"UnX9yHDb;+zdfH8,r.dsf:ű7!CՂ 6#P_YPdjeHU;ٚJUPRSmhlNLbᒼc1lv;L61B'ߟ[Sj%擭S3NoAA4 Z NWVT:r f;,ƞ=4.JGLM5(1I/;2,/ WaۘF7۝UHM3|(q&l*aK]J./>;O./o1,}7dwؽ|NOW/{K)ӟ^g/?7?߼{\&q!d~I-If8&)=r7 PPsæĴh!$W'=&y<؍ %:D%1gfu5dlJ"E' 47㵌43s)1N|u3g F dר(3 yf`4qXG"&P0lm^4BJQk W`}D ß\\55 JA+@(lVib3}<ֱ<`b-/\%W *)1-Ҙ01p j{Xf ;%K\^?d!fEI)uō2$ j֎oFz zf~CTͳh"/QrK*FCc݇v4`rF rY Xٯ.l\=XnTpכ_n~)|L7 yEbYtssn_i9p I~~x o_ 힞ݏWo.+uӛxN d c{u u~ ;xbS7KDz#6_Ls&4ׁSA1G\DqD#@$@A%6 } v1%| wu3q*v`ԣ'  ;ߞlD֓尔Z|-.^yQB:ӵ.R. ڪvlˋ)&!OlA\LR݈Zĥ2y(uHn:„^Z2S?bdG6%2)T C^O*StBiQ)46/*QwR}ezAڵRڤҖ L4q gĻU$D6NwGvYID ]k,J[Q~bۏ.Ё򙶶ğƝ&ɗcۣ34rkVXvXԽ-Da/@%e떛bIA;-RY ,#* Xmxt|&k3#RU%Rig>WYBߙ:BATۡS딯j{2kڢeӵ*^ 7<5=ÔjYJ[wjvY7^-P ZILg|y;㪢lС/i5҃ʰ\zi5ٜy\Am)㸕2ִ0JgMbBGW~o-k6ov[1Ob#u=jU'[*Q`FXs!έۀzѦN=\V):A|.g`Rzұc_ M76mZV "yO5,Ny"[xX+^QʗjNٺaqe$鳒K@LK;yTjۙ( e#~Z u&9PO-yĪRYD-TZސC*g::SNHp]F" MeN]P8 Ttj}*Ac Eiq}iJGk)cVFW8足Z@GzLVO`|Tc=ÌW/ל1Eqm2Yfxj,{v$Wϵێ-6qH cWi @5܆kOTz8ZFf)qLa<7Xs(u8Nw"ZE @]Δ`bӛ8R"#>MLǙF7X؉vLàP=ؖjG;S$a^AM6%vTZвY IG!fA 1R<ڬaGkf(F<[y;d*JR<E]1i) 5sAux`UXN4{rt7>Дe3bnՂY.ydM(EvG)jEZfGfN&PaΑ}gnӜG ZfP @FDMR!#P d~8BMKQV c=(yYؕE擽=e ا(:KK <##lR,Xf &{?sF ǧ9֔Suj% izv(G4(o<3|` SkxXOӏCU2A2u,'aLZlٲLGSZ9<:{P!NSd=g2-Fߎ?ߏn_z{1Fq4yx~zaw1u_sզF/p)jSﮥ8<;HW<x ) /s6 xkkіy]K]ŢKZ@h#ip|{05'<v:)Zx9ǂr̤Len~Yco0aN3؅ŽYs×"_&^蛖{- F|Nc0 @hp(vf_j(mXHkϸ͢zE[" R*lLY܉`U V$>tgdUґ..h[ZQf\Uc vle d6a _M<(]+'Ӵ&|VQJˣ6#Izt顲M898 ۑ3U#gT6ˇ&R0ѝa$w}6FMm0Aׅp61aallN %NzmxVEs#dt]مijlal&ZPpXIkvdVU'$u3}%D㚄\ckO>R 1 H,.Ql$X xПjf/F+`[<[lvC݋nq&X Ap`gҞ^A4de! ;<ק(^{^t}`)ׁNEj\ L L܂IJifXp3߆!S,x}=WQ1+&kk1<¬p = AD-4X 5 CL[4@ 6C+ eR5S^5$P`Lub9PlϽ] r7A@oΟ~;!pKg Rync.'%Fn~x+p/a_m:с1M '_hs3j# eؙC,T2>abfj0{]Y^Sˍ(~I5s!Ea;/cצ/oȩlU׈ IX=h120Lyfz&oQ,T{]nȠ| 9 2|<1 !Y{\.A< _{:\AWuVq BO =ym9l 7v 2PNmDB.v6.->8}*Y0pmfQ/L%Hu@zjBA{jE]tca3vfR(DOG,p$U(y;݌;;)p&&t(a8?jBLҰT4{ѩȨwc*v̙2'~S>K2jp=$H311Z<BϱBj\c,w9 GH1WvufaBfcjƍW'A1Yr`lG"3f*l:>u*P{j$ä1QDdR-79x0˰?Y cMmk¤U ufbFo}?as6"("PC}i4*Z=.w3ϝRJ3qf:>bO7(Gq=W{bdYyZ+j$2P 1Ϥy.WÄ nZxX&/ZX?g΁BgT3݇r @#(,t䗭g˳8ks\J1w1|Ġ9mKq>$ѶMblWnwe|N,mmĸ-:'Үٖ@^0yӴ6mQ[RMRK.F/ʠq@V-׈h[*y.SڵƦVYPϒ :fNZZkJĮl+Y@/`$:ƺju`O" ^s!>J r]w2[fU(`%kRc' I-SE)O*0HFj-= Z46iG\#UcOs+^T,3)vVW}lmYWƳ\7 *kwiW :>nHQ@YΣ)Nkrw6ǷEױَKۯyRNo,bY;`ԇ=~=ߝ7z{3~tlq{$ug;9ݸkeZyYY߱~c'_r5!_Qg;cke ;:`QUN=(Km֞7-3Z&hsqRzt&!6e)H> Tk+ǨY41z%tƘŲgme;kGVT=1dVXb`""XU"*-ȪQl~SqϓkXiLgz̵BCD}k]g`4#lr"cH!L>"d;Ώt}emc&8plZuyjwOhw3w]tcwNI?6~?>]m.6w.RU@B?l>W}wN.p~|>׼~}(x\}ÍZu,9"ޏ 2}.52%7nK7>9]x݌t.ZEѲ,s,a|*-JՏߏۖ ͸m綷h FtwM|~G>5S~txﯞ|ͣ'O?矸C OIt~~O?ͫ^˗?>|߽߼ [??c\Ëɾӟ=ŵWs}O_|ٟ?o^|^{8^ᆪ߽ϯ}^yzq냬O^{槗?ͯw_i|o߼|˫7O_~_}YG_=|6~}>g_}=W_g_}WC>dT -:8b>N$d"r-}0CkC-:=GfG |Oz("!&D_^}XqYYn{ð2оCǫRy7*Ưѱ`V8qַOxTzwhd5Tya]F׌aX1z%+Xs/@v{%]2VJMd|-LMZN,q:a>>^CFcg~sGX| z9H'"vƬˊE{T=cu_:=V/:.P &:a!$9q%iǃfC-Cȃ m M<=h xL˛c[ ׌IcB}"t+{\c!FDd^.|7;PY!n)Uj*$:M.'5A֖P]܎BHjQEC23WR mRZd\@EYXLa3 Y%B[ - %4U4FtY:#ا)a鏲H&-TػubmRdGa =JH;8_ 6uXÏj7~Ȗ:"5U0 )L7kXB{/`+iaJH*FzE$'M:CnM"DVFOFt;d?l%4% M~IlpT43aӯp! /c#000JMEw倰?o,+κ'bC>!XBtP&[%.4Qlb2"23:;,I(}\Lyh)R.Fd}4*r? 7)]+kB NL@m#r6|*}!|ɶ&shEʈ(9^4A$[#+w9hb9_܌,ggjtY,Owf >e֘ ~ј f<G>O~/5G `HJ-$Eդ5BJm >m 1nm}wP5{ k]ɼiJ wKAyfLzadC_&_<XW|?$8ST6GėEɘNo5Nmm% 5E%  \TT6QDfZw0?HN *E43u&$l6X7abpIP}1I8wrUKSytcU<@8{r:+9zqq[rǏ"OyC*@C$SD`&t,o{BmLedKƕcG|BƩ^,TLPeR.?jzY}@;uW52 \[\}YE*?-T[2.Ep7xbqQg"8TR!T>h;j5 `|qCFE90D5ep~|,OGAOK>hX?hNV0Ibn6P5ȸNd<>e!7BRQȩEI('|Ùڴ4!]OUq}"iiQ0[ir\[S>~&Gb"׽VbI/G@,o k2I'i,hJ ,tɝ^&C_k}1G*EGA\k_f>=-O-Yʮ% C2)}C;I!PS$ZVF}r {05:CHG-7Dq2Q9'd'!xK߳G8v }ݦLGJ;S^%OӧB߿L/ßį$_gڷ/kQ(kH;A- wTs1}GT5X&w{G֌иG?N ̳+QE#^`|XUŔTg.2 L; PP)\٭=[n ;܆2v#x ցFŮrMvԇt⢰?A88)K҂S_ܸM)M"GJ+prUn֘? IϸQD9ȸGvp'H<9{RE]al[x-zZ=5$n|Dod;K)pbJ&n%F L8d3oUj P@y{*l31,1TS3.IGt(m2QC* fbM|g SԆ})_ZZAxJ?ͤψRz?Q@ rϝa&'W+TLzhk4gi\y^\KU%0,IsV, nr޹("xms&O!pWYq\RUJɭD磽hnd4. ֣ xD.{^$u='[ 1ImY7*/#*ht^Q0ȥ!63j1jGpIe] ͂FlZdWd6Rjh .kj'XXD:q^KiU P pgnEʵH2HG?(!RgIVY  Q} [(".&^:hcz Y˪&?FY0yAޅQ@C4\3 +Tp(~5E?3KV29ĈA'}Y5 I8W2@!'E&y#8j^K1LB] L"Ј,\h>uhEBNXܩpY qOx&T`E妫D^(Qb'EB D,/\$M50>̉5L\ZG:T$DZc+I\@z)M4 !Ϛ)5=Ew =}ΧKz'VUY[Yu~$Z$5 Iڴd ۺ4. 儜AxSstKI'QI5ys! t:Q h%4ͻ3{2tr/IEWDj]Z!= U]NI>E4eύYV.7i/P-٤'8E~Y6Х(zV>ǸdB/FEBjCXbEddMd><_-1MAU.5a:U[ LQZ4`%1q-ըVd)1hhaF`[К-n 6 @Z-1nvpNNFddEK\BIoH}5uje9F{"hR3r$S~b\[$W4۟l1"@ f xOÑwKnkPh}52tn-g`VN^jSI(#:7ք-Gn-wb2]q/5Y%XaBMVr83Bx0ޗ j 礀sR&$ť`S~mЋg3r/b!Ph߼D,x+D("l9M& byFM»5U̹suA) 3qU_MKֆ& QpoуPɰ&ϗ"{ ܬL޺YIz{lo5;?K BR"%;-D Sx `Rv/^E4 e(BJy$_"BfWPK^  zn,A(9|Lfw6Hvf ˿s!_wh1m@3יgZuAZ.aڝQiqM;aRz"T`XPaZ)p>ƾ@̓ƹ}Z1|QGQ>4t2aVp @?+㋇jUubXyĀ \˫AE ksѺBZDA ,*8㇬0*" рȀ=t- `3^$kC. ^ݪ>bQ g d< 0 $5"$L= -? JCQP prWpҍl]bv V9r:U (/xYΑ4W+aG*B]UXY4E #lR=n~zEo_Z _~'/}: 1kx2XmWc-ȸdf+̻\Z~V\ّg s{A\8cn,QVQqN LYD{ا6[G a `;O8&/IQfV*Zׄ)KejVQAJ/ uUuA#zJV3%IYd3Y͒b$U"kō$UɳuY+)]cDUլXH #%5ogyd)073s'[Ŵ6Y48.,YqQ>J ee2,[T S Qטּ'YAEY r[κot\ډН:{1l^z*GA,mKJ5,p6ҫYg::KfAj]+ 4v}73B(%,(eC30\;yVFY V+^ıMNRb.5ϜSe$}”+β-&2aqah㌒ !h\A/yKBuj:d3RzV<5[wbo)vkPy5飐Αbt9"9G֟yLX`1Q5@rHtӡ?~Ҙ84ޜTckj̀OoxYZP6E Yqv?\5gxg]`q!\׆NY<IT0mTe l4sYܬ5/eA;)EJ%+bIr.j=5~F1bnʷ:f ni+љ WV#ϫ4 #Ϙ&-A:1LVÀ,}lˢJ5mf5)(lOJRT' & ʲz8UTK&+شr<516RUai|R\ykM,M<"2LꀀGOBlC}kL{2M4>gtA2#pً&'acfy+*K";Qg.B=֠4 E,:aR-5Xx&A'GHAYg4uHdli0M97D aΚyqˍr:b"o>a"ЅcXP1ϙC财]3Gi&8Bn54~@N.ΧMېB2h+H\kM}-:h,E82;h53GӲђ["ROƦ6dhMȪ%%3ar \<)&A"ubϷUrCxہ ܦx<䡂`Llcx-5qIj @50Vͭh'JuƤZg̉5+{D4oS%k6z>[T\Öl^qAgY@DC2fj-2ZDN9 }ɀ ;3Dx![P(ɗj\C&%JTx5P bM kz:Xu gPR6la(F'cɳ m A׉ݔ@6 yEFGw&)*- 5)>P`VVچY0$.BƢ]!V-ͱs1e=i+`9n/ۉ)$'J>rL_ *XbLiXdJZ4%SI%\GAX~T33u qY%JP YճuJat^YtѳAHGx8y6ie8d#(_YU+3D( pq 'ΉnV ۸* HZޅKR~$uSCUQ!749U2Wc: Z&_nh#XdVR$R7s[J =ڼA'j)(=sm8>kj31vj9# ߼]pH N" ? 1Ҩ[M@, 2G,H}~[GC3+!Zwl:c'jW#u0cYXҘ2X Ygf9EC2!L;Xmɴ<= j򳷋f3"OόrZ5K ':]ܝ[˨/uֳR>C~6J[to:#(\dt^ yOtFL *+ 9qFg\SEi$iL0v\X&x*_ho`RG(D?ՓbE+0gǖڭ3ۣẾO "T4w=]A[x`f#LSΘZ Ӵځ9ӑFT&ӄDxbQ5Bק2J_34O )B!~SdY?-l?Q-%psRs)yt~;qyE}[kq)6Gr\Q 怇,,s]ޢ& ;]u5*8ӑblP.i\t2coqj%.L]ua9@ Y!q}uy >&+beإKK͵|Fa?fɸ]Q>JBKo9D&(\˺]ppISy{۰RZۯkdoj=ҿiNK)&!@q&Ei:.\J.:H2;âߗqγsl T-.K^\3mw, STԩc~>nw  *ϫFl1LG&NqUurp .|.smo0+gr-%{ /l{6B V<%\B_m9q8^[龭m[F PpKn8M+^[.ҷYg:o˄񂐶 ΦËޫqR/(_L ճh$m; U"pB~NuS92[ Kq%/l2\hkϋJ` ɘXJ>%l_War68\Bicwb@p[#_j} ) /"?۞EacZKvslr9 ףI|_&Z,Zv>֤.l>ys[ƳpAwۀ] Ue> V6.t;Dx|XI?zz S߲PSDnNp i~iP0ЎElMlVƭ(mkÖ#nniC,VOLk#݃őmsgC^ fŃǰ4/=:<>ܝ'+}*ǡr 딣gq`0ʙgKQAd]ZEȢ' n6=qnéRQ3h5j7Q 2FǛg}KK[T2f'c;Ft{<8{-.{W\rE4/|:TS%87{Y=gCulq=NYOg)ʹU4 Fg*Q/$ QF)(G_}疱;-Gê1wtJlJ.nNM.۾y rt]4'eRvzyy 6 -N{&'1^^ipה/Q\C^4D:bnPt*'vLϳ,%k#Y\IykIcƛ▽QVڷ6\_elJxCM^8r'YŪȶyo);<gQ4'9j ̠]3,k ' oe5#Sr:6]+.s{pA۷C6?;rݽ^צr671Uo:m:E[OwClmHоϯ5/_1lFfب36L6iư uWZnQjb]?{4Jfɒrz絜o[A'm&;]tm5y\xZ$,mtnQ]r̖嵢=ZL7aF* \OIU9 -׮=Q@w.Ͼ!>3ZG VJMڙ(zr._oR_/TbPvd)L18}Pܖʳg-+s-vo|r@p9%μpSD }* 0Zhio|w.3 'OoJf~XVe'% oQkǩ4=pE'\H.{X0kNoRN7$kA5w+9jWcSF 3C^+ݹ'Nݢʏ|[Y}4@F%#ݝsJLq|>po.o dN=Kz.xUi2ѕ<*nwF [B7fgSv76{'/;K&q|Уr2xz;I _MfIs i඘&:Խ~ʔ X t]),u 0q7lFBГļ?h;*gCx݅MpkObrZ.FpKtMHJan|[nod('0rKL\ByhWݵq4Z?_1]{S:_o5z~;9xso]Osac 0)w}8V:ČexDK]Fuu"j w ;9N[(2H9k|ù3d x ΞXasat:@ۗ*,B\Z%;jޡgtUQDZR7O_V59ǂ}n_n0Ѱ`z$.^,]iQt@̘Ts޵֑2#boO$3w#٥:<܎;LW; +3HEhB ҿ/m9G/85aZfi.#Frcvj[\qUwHdo=,wv.\y撍'%{<rTw( ;A+msҼ[oSBCB(][~Sr;ǰ,+|QQڳHY8?~Ul^z7LwI^_Zj:+ȧlYgB!I0FGċyn)΁ 0YT"wYx<0Ծ"4Gd<)_??'铞'=?ya;Uo`~^y 29K1DSph?GNtE绕=T VMy)<S`ΟCbrWHE6c<9=XT?Jy{ S;4H:2HMqEy (;Q9%5n7'oU$2e3Hxqs Z#uDrHq:#=xѤU> Λ$n+揑t C؇@NhWM!2as4U훎\x"b*Eŋj鏇>m:U$O' 6Ms) cġuR4ACVPH@[AT%=0E&=iժڎ$JWӪζiuic#h#M$]I+%gԷ=rZʚ% ty5t1ig~ .dpSyp5cdɁȲ e:Q}OrnLRX5C[m2r"q8)&kR›@OYK'6i ސpC8=+bL}F;Z&IgsgRƂUޒ29͟4w#n,dܲ3hkd{Dl6: QCGpą4 2bEAJv;4o.d2Gd7ՉXF( E;IlL)ucBvA};Xi, +eʑi2sI7+I$Ƭ8N˶ j 3(yMfz|\(Ry+B2&A5F1AJ9'0m0\)\Pr`׍' <`ѭkjX}ؔDr߄#1{>4㐭Hڤg+S>ɝt$H׀ D F^%t2?@^8dH㉋dT^HDɋ'W_^Óg_h!> yw_\]~y7o}|W_]]?yR+盻to}\t{eˏ3kӳ//N/߿5^pTફWO˟.?v+ߞ\.7?tݛ_޽&<~w}SZ_^]y݇tr{|Oܿ}O7n__!>~!?|_-竿|W^~?7W_}5z^D"'S\@W+SπKZ.8X Kar@>MixXIˊK2F!vǶ" ";V)Y|вB*DG-(>O 6Lzby]2*) Hʪ[fZVo0%;)*Dq!&I9a:ڶ"tG6t1)=؄*MN@q8`_6mC@+UtըJBJ"; Gd4W?ltӕ/r~Gy&9'mS@ .l؜ Q6T;o)UP [ӛ s83$'йjG0U ԓ%aϬPLt)E&WDy,&ENJ3JKN <4krTHBh S, %5f.h\X+(QUC.P'$vJ( Cs4ar X ZRHʔ. ٜ sJ.[Tfw= = %3FǤԙ*p@!*\JJ2uwGY5 1=)D'Fyg$G`cS:>r;ck>?0}1t;s#(W-)˜EeJY5pL% *J.20f7yp9XPiP+Y)p!aGjIq~91 򖜻ba*٤CE IMŒ $$F(L[.jȢ;`88ڈx9A'ّ1zrUQDk8-K@`Gjf(BMՃPu3pEp^q( rV9jVfQM!iq} =KɋOzV_>;p޸1r9]ͿJ7,՗/R=W}г|T9cXK e{p 4oL+6Ev4,Fj447͟x?j[lP 2JRKrgf ?gMƁ|+gBq#O=3n0V!&[8U*hZX-8 NܐI5鬃GI3Z:F#bDŽ{Ә[(SJQtmCPp4,BN@8)h#u8zsg3%TiIhR9 VrquNU%}A ,ڠKsW$U*aO5ys=&8N{+s%=尊A_yWe>2.h4H+5(hdPaB4M`ҭC IiذRӠd]ܬR(ZTYo=9F!ú-c$psđ lc=Qp1X͏VNnÐ%ҹTTec Lz0j r0NSCG0ᡜUCҾ!O CQ, J1V;c9;ϊIs՚$Jch'5C_8 $/qu2$ T?_t\X|!Gz0݌C:pQO><$99itv0^QqGE4Z!P%` Oi@W`Zs!%$"h<$ )"P!:/y#sxaBhC#Ɛ4&f$AF)x}}Ґ,rD݆+ 29Euadr,9*>=Xb$`أ|И6OF[HU)[h z_O)0؏H*&~σ<2$cŸֽe3 lb,QOTa52C-g:Bqem:4&>0ʄ ZQ,!A)no8Ê6FIٳOƲ B Qȏ RfiRǰ6a_ S>8azX 3L* C,[IIRbS0A9h*\Q'Wd&$>0hZTTvlxQ_" *̢W 5: ^F(C xw yӲb8u ӃEs6C'Yf"'8p3gpfޛ].c&: xixbHIYt9Z"ө 43)# ʼ"m,=,3፹,1|yh>h(p .5ul 9fq(1KMS[P3u̒p(9*  `:a{OU#l˰}D]&.L -+ZW& /-Xs|}!kU\,5!R xْ,*5ۙORVSpVgepZ87h[sJvUZF+SevO?ÂTqT9ZjBؐ~u (dg|x656XzR<%xuLJvM V 8R!zIqhM+Įˠ9<ԛ}K@֬,7jPHJiG&1{"AH E +uFtR{h' _xό]_c)%gjWWUAВlNoYNI%%6>/diya,E-jCUOU>s&QT\ِ_8vaWW*=-Cµ&ԪT& !jX=#(S 8 ̿n(vT٠ӏs|n%.ی1cR,3Ao;ޚSA&A|R,Ďԋmڰ Ҽ+ *Gy4tj)} ‰W=P6!'C}r:Bաtq#*K{OÍiY}xB6)a~>)qR2rA<]zo"w۠ VV!uƲ@܆2@nVcPhf lb`|%)ZT9) JMlH9mU($HX]OH54m=Ǡ9)… <}3JخLS>8/dhAXp0镶 tX6I1#e-RdE!j9`TmWmEF ()a Qa!0.`l-Bނ-Λk(eON6daTu9bmo<92Ei8() Qƴ07b`p30vB;,g:om3J|*Vl#Ѻ<#31\|é|rcd(A,&g he!̕-u0SM(f^:s##G1oQ1/leFMa~y:?zϼPϚ%QlТj1)MUe5*x[<g&za3/3=@|L['dTz4 t2*UX@40izPXz,˖R5 6PRmoR'sADJM a`x[J1VxM^B ~v2xGRnD!h\A+#5Šy? y˛KY=W* B7}(4E@8C+dxfr`uT0Gq z5($J)s%J;6!bh\B/F.e`S>٢QvJP}tWPX4?3uCFnA7&g(DEvQێR5=s^di0e]鸜Á{P㿉 |HVIВ%֋I5&TY!OUS2Nx? i('#͖d^WȄ)c`piR)D@ A,o/.Qk B:r N#xܤqS:( OFܢBtRfkg隐L$=($)*EHUPtW-hCIC#TE((1|PșATւ+=N#Aρ]\Hl1;q?#$my3ݻ)Ǟ3A@T-+4Xp8GF3Y7)\+3o!8g(]vt9.՗Rt~ÿ<t\%)XHOkݯs> `(3A+Wе2bA.YV4_i7!X4iŭOیH S&`:FK`CA2C&.v3|邸XgGAz6\AFxB_% 6E}׀$rurG*o8=vUY=Ht+JߤFZ͵A$0TMti gOFDSva3uNN~O{f7J<cB]0/S yȪC a :w 0 {l/a>FژY!5`2E xMZ O^Cl9K(rr ]#9%BMTgOlf Ю 9<9r"jƼk*ԶltҨDN#35rtqtz^߇rO-f2\: Tm~p_tS~ ;uցO]G;y鼙PqR`ifC$5p:6JeKFh*) %q#e@KtfT [SH)Sbvck~~+"g|jڲ>v%GT>4W+ἁN.ubw*ۿ,jGMmCc)΍ދ&8$ ,ѱg)N^r2_0WÆWUsm61qĭD?7U0=:Xtbxt3'Gdjљv_U;d 7FrUZ{P>{p7֤&U6E*UٗtQa:oۚi#'x G'nS_ nJ -RfͰ6a=0MNkbqH%w(uo2NFlnC"Ѭ:)Mv!i6OtkOb)uT7 "hW3E~!S7=qL[ @8Ȝ]f6l0kr\OZCnfQ*H)fojPC&@9kfl4-Ne-W gij?BR0 iMErlUEr߼þyחs\y_Dl?I_=Br161 rq" 8 ۭ7ACVTm!,V#9;f'M0l&*Ђ}xloafB$.v[|RVF`Znm:3;NZXV0 r_pŵKSuƐpUA\g^oֹ"YLMYX-v{f7nt3S}|eWŹRB{ފۻdDg"܅^O%S5RYi3MG F2j"gi4[mlovŷsi:!ٺWx72ոM _m/9g*e8 M|kV)壋1o*^'NP{ζx'6:JFGcȩF:f\Uڒ-asL"zP$ЮuvؒÛG6nfC̵fҥ_5#4})7ˢw{~|wWH^:Cpu5OgjW>܁=?M2Ak@*5JddܥxG5]GI{JB+n֭nat܍\?sf}M,c'6lQ ݵWŀZ.4k'[9vms"RUOCb˥m3UJ`Jy(:ggsR% k5]N$} v"UܒN+U ]lg4=e*F݈6[,J*8lO)bk=U?ڟ5/+ڈ5 ͽΏbF%lmtOճw4eOy튺 [y&S5yA;hҊ;SVgsuakr>QSʟթafF+;ˍXl8tJH:+}]e~ݎzzF| ͉rj7_=Z†k}PvluT MQ/Qź8U$crL}s\9N%4D o/mVraeI0=3;5qTj7ZnǍMq~%ڸ9,ivV?W:DENN}e%jPC+c~ ם|sR"Yql%_̿HAiKa Q NhB1)Qd68 *9jc10E ԇXTvt+%~h&yg3C Y*4]Ȅ`ZlO5a &+3a ܏BDt򚆠2rOAT:yP| SiBC-}mo7g]`snx v2;IȲ!)Џf,Iv'3XGN&YT8 sy6lYA/ޟI[#_L<\_ʝt3]/6]&ބ|g=!~AB*}A7>K| _a}-_ `>,73^OR,;$).RxtRL VT_˒]KV}6lp0/OVe_5=ei9!^&s_IO<ϴz>m7RS[l/,O, LBnŅCvv+B/;9RҲ;]>SxwV̔(Ä] k`-ڄ,$5V!I`85vZAEG[^o.В.R6}! p_i2jo[.ii>f\m(mtypYrl!u!sTd!!L p+DY%]72 Kr) 'AiYNL˪FI.* 5(Ї>|o4 ?/U/:x'OzV>SQ$X2TUyOeIeixg7 ,֬Kʰ7k\x)T3h,9>e+m$LAsj,~Db?z\SR=}GSz ta9ɳ5O`hi$f}dzS)X*DXͱ_`lvNliR`$-\ZʔeP#Z/ xG8&ɣ"I,@$i! C߫eWU>^ {ޱ !e;ObxV{J2x *&OF'DgV$[L "$=C'\oı `-D>)s# },҈!%ɺR8n&9kr(wU'_dI˖I)A. BP/X1_pezNd Qz>؟TR&;Ƃ'f,'y%_g }vzO/g/_0z H(?B,?~xqݧ~{?/]j~^r~z{x{"}LՇw7w<-dzOd?z'~.\+_Oo{x^ջw77n}x =<_//ח7w<.yz;]o'=^߿~wsu?<_ywy.l>O߾x!ë叇go.//_/|/79_zߟgy&x a؇9W\B_@aj](.5n+-Z )2dEO_Yl V -:s |˜U!usb!hjɪz:h12LCzXMunʹn"O8 -Nqx1ӜOBL): !;^.ܰB<Xs6A 刴B\tZdHDUa"V_l޳+1=xA#O[r2.dvr'0!? lmDrQrXr*{cgRD&*Q/2b,NAFۋe %D 678Q16 ry Vz ?Ņq%FM$qܾ?')^c[d"gc(;h͋re/IY ;97])./߄tuJ2ׯ~y/!lĚgV<*꫗GV7wO|C%_/9[.98 K.qH)b" Xﶤ|d:FT5kv6bc$kiPVVJ]_XI$ !UNe쟣w8wI AV5OX4 쀘MnΕ+ 0?v4:XGN߯MRnhW3YR i;X/Y))Zީs@VQ/"pu @V&,j% n2leiYqT4}ARwSH@Vʄ贙4=lYN lZU 2|y8U ^5{ݙЩQ= vaWcRcSchhdž[% 9ih,c HQ[Ge;2reDќ: āt@$-6gH{=dne];Hp+9bg gohj_}okr'RJ7o(tCB- @x)e"zQypzmi˦"6DlWF](&3זoFaiLFf/}A\7jXmoVJAqv6|V@ؚ]*Ji>d<*eP8l3`Ww&M:Gu\[G#,;7싦U5C$i"ɐ4 Ql]'M &&M{xTMֿ۫B 寞Kdj`/^+5z7oޑ{CY:eod{Jpq> zF#DjTH-l#~mZ],~@4du)>&]NGY;ӘIr5gʢQFcdF=.SvP9zR4/HO}s}ٸ"QFďؒbV|N򸙉QÐT7N2>s JҎBDz ?̭fD0a CQXc!=BհZ@ TR~*Wzn˝-.ԦgTK.e(,6CZeۻ\x?ЉnVX4+MmEUGFnJ3f@]Rb`\ׂ)&@+8p&FTeTU60?PU+ɻ!A@ZFwo?+JU@TOXldHڽM> Z 5Xȡ(vIq @nAm͵kipZYv5ƩX'зDKUY5ŀ%<Dn}h [DE4iKh3[i Lr6΀p̝2WER$v JtKͥ;rTs10V-V >tݢS`S1p\ 7m=*XK&V!7,]1gkǍJ;U+#n<Odo hm4mu?/7Ԃ vSV+gpn$iD9]<{*/ytZr}ww9헷׿mQK0]4CxË^3 ne-jYI(j&HZXȋoe vvp;׻]9yBFHx,Z q,j,Z.uwhRҽ-|nF-4R<![T%6L"פzr3r zծ^r2O~2O# ZYbu(v3Vkζ8e۵ QZ1Vb Mps*~֚(_ЍnDW`]oW 2v` r 'ش襰&4m{  kH5XHZ@Rd#phj5i`WNWe4(%v)ߢ*'I{I>9c[=wh]C\C"#̹c ׭#W6(4\߳h>HԞT#23vDs]aэrʃTEAk[Vܬ\10a+R&"Pyн%J3BDv=vSb8lGFF0$ȫzxqzT,dϖeU>$D 1jfG#sd"<۵Fyp\.E5 @0emM{4p _xjۿNk[P1TL!VvVY+Q$==N xHWo۱Dۄ5AL @頂D?g0]E>c#U.WgVҗz&Jw[jġؽئ]6P5F#5 L1`ԂBpEז-" ۹øj; RD&jUrF޾ķIC *Ӹpn Xġqbu Z7zb$[I#!uC ]H}r2 ~'nd674 nDTn9p7W*-d#8)3hA[`PbPqsX1g0%հ$3_]<}۔d%׷ ~xm(yh>/(L]@Пzx_{%غږ!`!Aw=\y4 `eEgNfB[$\hAgCSZYke;C_ ;(s6N~Eb( & 86 2Dsdu5)VLْf2q7T+[[]V#pXb)`{[u1X+ug87^yR=6΍h,x-W;F"&PJB)ԃrIV}UoudѯַVaȵЪa|, O~p.g*! \6UF~PiY󶡌-`Rն]p}2Yڣ6La5LxXjb)vU^KFdM#3Cu͑F7y뭵|an~Cxړ|G#?Lv&: O_ݨmq(=-f#l#YZ(9wwBjv$ JզN۹w@(Fm,˰4uIA!qs~8`85hozM?ՐMRċB"-+WD%^ڏ[4'8˰aJ 7ZÆ/h)On5%W!x7\\A+x:Fx BiG~XCm%qK.~ܑGu@U!]sE3%:WL Ey!OaIBK&J8QbDR$Jyŧok->3$Ua^K߯]_o^>4JBDbo'y]Sy~nyIu D格˂֖~o$PkdPjG%c5[b9ӥb1!opDaQԈRiN1ڝfy}y }]s4 ct>u#1iΚ 1vퟗ;360yI.M[OΠ™Lᚙs{-s.%vYɳ_9!Og00w?ŎX hCۊN0Nqtz+dR%]wB WSK.(|DP"FK_ϟlS6iM<`;O&^>#$ikecLNF|/DwyKDGn yj/9Ta`x%;+ D)ox8 -gn4Q9'R4oX<-Ƭ5seu2_6[8 zcJkġ K _ɑ1qG zα2'v;95`z8LmM4;gc;qBd4>4UlS!.=)dv&*Qcm/$G1Z{؃VeqE+S]3fkH735|+H3PX \,&.OFa.`xmTdQ:A px 2a>jךIJt Gь8^,Jx!q'jHrx2x u'4IAky郭VK&lF˰G4 @"NSbgL|T=<;E 5;5S>GHl$[ټ˖a<ɽRi4]&CY(a;N%bʤCBIZ>Ait4< y'- bZQɭ%Tb[D n0"uycI;ElzNTsLH60S9$W~c7ݛo1׬^Ɵkٍͮ6;]߾tO_=֟Jǐ$g6b"p=o`mcPJbEA߃-o|BwCq Y@ X }0UofL0Db6M3"LkZE~psM ׭a~+HߓQԭRmoEZa:Y,9[5<\>wPTH@EJժIi6q}i-qjnvlU<I|Q]D(0@e6޺QT!=HnEvE%$Cv(}(`zm+Z-<بASOXE$Jq'1CNj7@Ön-6J_mn]uHԋ^sT!3{|ZM7 G[-[h"3T-x ?@0.lcAɆ^hG6#oם_'BCK(]m?r= ldy/> :y, u㏬bEn7 .nvXOS8QʣÅx&?:xERԹnQn,\gT;:^4ИÇ ړu{xh32^wx~,tËzM7TΤdD_Aw?Quu62CS[ 󵼟8@(Oۣl&7gUhVo/؜Q60//|O'a`'rFaqQ8zn32/s7dC˃Ibz /> ?-4SnBpܯh]ە)JCw3P\At6`I ZxSg&CX5Sa5Vϯ_k}aF=np!0.0,)؂t & 3Y)` Qt60vCW/ծjw n.q`jّs]rK{tI:x?I x âu2#AR_'aԼFnpcVYhnΗvT{3=: Ҡ:M|9nZ~9_*n0SJQFa-Z-VϚYa亅~ 6X]xtӞs ȧ L=mVt'hh?,LCخ=xiԌQ4 \܄ܾÇp! //O4spO7o>||޽o>w_Ͽ>%~~⏱ދW?xUW/_Oǫ?_ï*u_D;e5;ũ)XBQ0/kP٣&?(kLmB&C+MC1!Cr G Xj8 ޠ`CUӎəzQXH-LJuaOgI}v\o0oU|.d[)PQ&as|BA `=@h:KPFUoFm781\!!% f|h ~$@3zyBaдfk/tl>I&!mI¼,{5C.ݽ&s(8YN4gB ׫rHy3sgD5x.qga  'Gp.y"ۙF޼͹ Y&ZZ㱓()BͿhrE{M'p̻>:P;AV62j^>2j5#8q<(@P(}L3e0$?jkAV‰JmlDC2ERlcT649Q)0ow}(20ˀF vOAA{*AfSiNI8`Qm6wdrQUwGXTRo[P͞ K q,M]]M0sV\<YCӿ|AGbz4:zaP/hxuhg a;&22=QXqX9n0.Lp]4ΙO0@nٔ1z鱅wRa؉j:{'-+[d寒L reqnS 9z@@Bn6köz-s=-UVp [A`moy|4U# hY[sN#~acԖQvϐT@-h k[kvW y`G`(=yi2̀T3-O\iYU=ѱb t ~>jy%=W賟⊇>uƞ?^z hes_~׿O|0W%Lw~F!aHK"o[O&Y]L*lEe[PYFBL3L7ė2`G@cZYtYݑ2U:&sf21h֛QUTRU)h_ɦ:z@XQ3 O;s} dg@N`ݠE."?>mk!cpj]{˩փ.x4kvIi^'@L:$r&Ɍ0TՅڦ@ݾ)YJ5S^Q4X1=8ve+;Uر8cyaS|Yy+{*#+OQ$2,WpGH0f`r^I!\?УM+!*33$J;ccSO*Z*K#ˏl3c7'mFZ<`I BZ2d30U<7T$ppTt^2+{;3F,Gx0`Ń$XV^Ph0g;x@<;z3]֞+qqwLSL3'F(v4yU̓ѧ@!a b0 $тNOC ۳R`2,۝l=BgUD9~zu7~ׇ@ǫoN<ӿ =闟/V'Y-(L9}:>'HB?Ao_q7o߼?)9뇧#tC^.N$ AĄh@<ׂBC:t jR. fe s2Q_Wmhf5=|4~DQ&C zDA3$e [D L|DU=7ߜ|s+zt;/n _OTM Ո >V9Mگה钷^ :(&o3̔y;5ghd^B;ی^b')LMYW $PK'W۫Œa1%jMӦ\Gbp Fcy.% 2־f]< qJʮew9=6F-= 3bDa.Sܖn{!6R bھvSkFdv6W͉߱Z-80be8/So_h6)zO);f2*T%|XM4%nt vLaW5THX[諓b%FEs]%5HI~?`Pvuv]3.࿈A<"PAtt| r:dk~uဦSaO~#ƒh87&xl[|nm)NGɅίM{mگ8̮W zzd&Nx^\.^]\]uR >0.~]A-R՗W?_x?{$ȧg[C>5#CZƛp_޽yonWMeN^%,ߎRєZGiڭXtЦUdTiV#n')cdb\ L$ l:VOT\7@0y 8r_"%gώ0/C|ޑ&εp0i'pA |-qf`Ѣ pOf+2 xo~:z&ԣ~,?]=`D Yg,%+?LM#y9b|>\:-LAJ"13C}"T,3H<#{鐒 ڵpE 3r6Kas/#k:A,7@Ҵ҉JXdيR)bGY T͵Tѐ%2fͣ';J0mXX"1cT4K[SNK3S/1"`& U"k(͛ tB:;F 4ʋˀS,<s9Vbc$9J* q=>`LS9c*FB;ٚ0,Ӣ c 6Kf܏gSk"5iup*z]<*HYd4+&c V aA׉ABA2eTl=`eFI/79Ɨ+a,BFtgE<]zL4Yg=fH=t\!`(I`)օ_,'`&U1O@$ϕ+JA]l p}XI3UKrt.p 2q/2~v.!bA![: 3㪌6hb4 AKx31v"XZwK/ |tkFqx\MN#K5Ni~w>yZ#)[$GK@ {ďnX,n ̥AfG*NBb,!kRJ` ,:)ю!.+nuT](2RӧX%>B*^D˖ŹʓY6*@WmbF'LGV4FRFg,xPʐW13d}+ [,"~z5 tJ25{UT+ni\; MĒ}~Ħ&d5W"B$G%˨U9㚂˒/d6yhhCv֟:;* !ޗӰԴ!8 gh>?hXnJ5!>*wmI*v<1 h&"@RYZqqJnxFLJVp/Bk$-?ZԪl~^$FpMXth)1cAހ},Z97hSCyQ/bs-fjX@,&@ RZ긖*-<]Tےj*qi_Wzj}N9?T>0 R;a%ɣZ xR`QA Cqa0kr+UEC V{jnR? X&)R RˡaQV=-]hicHIrTeL9L>WZEtVn ;n Z'+甆ke:d ~ȺM#JYK X cg]a#^~y(凿/kXxkjX6(.mo~+NЋu,u+էA٦]U8Pv`Vo*+bynEbfIlZ;e\&Ēn%)9vfѓ& 5 ;|4귫 VT̔-zs${$u6X)Nu(<-PU a^v"&LJs+E֞ -{#XeU9 pITO4iI;ج/>C>B|)"&ߙT? ӫWualh!">K >+&gܼ۞\+TMKR(.U}]\tw7EM|S҃ㇺ]s|ԘӬU͇증Mg ~vQݚ'`aO6cUի R?ZVl,k!R+ffЭIԺ=rZ%Bƪ6RE3<+q䩥I XجTkL۵M5$Ԭ=Qק!Q!VY0\l;{Q܎*)68h$|cӤBC;,][Ƒ}ڇŚfߛ_`űglXJUKWuu4N2Q$VSu2^|g.gNj.6]|?/?^g0]̋/z3n)2\[|.ƋCs0/>.\\ yu-pms-ڎ6y0y8\On3xsx[ nw9 U #/Y8Ok<7n:[=}O['n xv^jX\>.y塡|k2 \bܶN'Ee0`ѭ KVG'><Gf:99,~OG&֏}&VяGH\mF|qMpGa}x\cGo x[>/}10-"eY>3>Å 8-[i5)2teBƽ5mb.+?(ee⃍Zx8gG4+'Ix"d`] Ҽ |v~OSu`<9o"ia3aTYQVw+;kq7p=Vއe7<pEFU6q,TGG q!<ʨ2h$E~6?]y#ٙ׆ބ1Q4.iZ"6NP;e]-;{Q2pN^D~F:^[v٥ǩq<;g<%Lh585lI? Rye14=gq&8m\Z+#y8/^g,. ɈB p]FCnLp8p!÷ 1Oڠ.ڢ"ĩ:=WjM Fpcةwpmq!͢)`u¿o}Í Φo7~sw7w_~51ltn}_~=| 3}?懇cë?/o`>7? 9Ļ~^xos3ן)><?ӗ_oWÿ_޾5\{O߿y󟼽oe ^>}\o^|>OObyWrW|o_ϗoo?߯~{o}"U>b@2QD?{<h0z>|"9#a׎Ǔ; EcSa{pS!,lF,0u@J]-Rx*7ge]lG׃LB<8Qeœ GX-SPeAjb= bb4pCad2Mp=OK<c}_k_0Lkqlq:vbھ 11yv_p=oCAs?5vPDEߩQSCcؿ TE:@N䳦&D{;>is{K25wL DǀuD8(G蹤 {FoX2+xmPqDBL0#Db%q0PW7ـ}瀉 Q63DXڪI| t?LL0!g%V$H QczVL²oN= ؏Lm 8I.ML hD0rnY{JԤ[ԤI/J$ 59)$ xGCyޣY01N^L#b&wf3Ѥ/{[޽y= /}Q\<̿Zi|nNxNܑ:pe*=v؏vclQ|_sSzO0<&14ׇR(> p8&ek+/SQRF!'85֌&IUyvwR,©?X:#m8M؞:F _Cs9p; f98tЄzBE ΋5k=20R&EcH,4M9 HٴR0&AH%X? ~ sXm$Va^0 eT婸q!|t*VOC5 t<:-_@[0==3 ^|Jp^W<C;8(m_.xYD Imldep|#t|dV$ vu%wyUPAUE_ڃ*4 R 䉖2O$KCxxB;E8 #!L(YĹ\si.Tk1U|X ƃZaZK>ogM^{ZnǃB9pU$~TAv&cHkxPό_{95A)df! WcɄN5vCؕ6HE,ReӡD` APb@-BxB`~".n aP΢AQSJQ,IPjh4-֌-dQt/}-KWr> \x JYlH0|BwARk6BMcL4 +F#V] }0GJbM԰zUkM4жrT5>)L %츻O( y ŒY nh %-yϠHJҰԚ%#HLUĤr#1cz᛿q<̿Z$գ#1L> 1WhSuL!zh/DkCW2zHEP(`+䙅[ij;歲hij|m+:Ba! P%]2 xfZI&mhF0 elX4Ƀ\b}€>6 =$_UZ,K~ʿJlEKWƣRuXb,%r'4~!t">TvZ)p rҙ $O6Bt?-gs"H=KM."i=7QաϛRE]B_&)(HS;QqRpPZ[Hp,[dKM4iJ~` qB>zysDBX% 0aj- ZMoqlFH!%gZOHaQ̾|}DžGi^ljYth0F?Jᬃv2](| ԘLjPTiW$|IL55W5XP8TO] } ե3Mj4HE$? 9$F#Ѯ!N=V>T )PA>)MHC|j1Ԁl Kj&k FSN - w0Mp J3 I8hx=PPP۬i8OfGh{[B;V{9 =\d|:Ƥ#MUAn v n&ƭZ +IeIj֍Ih"5sֆ}}FSwlYbW'K MY9L#`B2K$:tቒ?c }=~v[ y>{]^/}4Is#u/ {f{u{/Ñj1I:٪Tp EmrrX!xi+mT*4Rq[!_n+u`].NC!4+2E05j(N|CfCg$FKq|UXMfajTbqmIS6jWۈ!3$[5a/Xd`'J j4-#UY$krcl[ TȌ&$깦u UV+s\$YZTN%úh]=Fqڔbvh,vIA:6õڃq /EfZ=B vAsf^ykeVd:Ф*fP?*n j<JeQ-OP Uz(aP"56BBPⶕWff&IuJ0l*nTfnc侦|^#K} >Jo$Jh@vV x`iyCGr&UmmL) &/VU1Pa$$J[S |l7N*ceBT6xP#>K2Y Ju : `pV6 =q6bkĴ&ulNqLHO]F+[W!@aӕK5^H/1B=XY$޴5J_PCbĆLUfu}Z IŇM8!T<.UXÞ2C'kƿ, qZ!BƯ R##b,9ǂ3LT^0xH6+xDp>;i~AI!^)ȵx*DTJ4' (yhga0iky>Z0?I}%,64T[߯Ҍ~g?X". lW['e۞R)4ga Ei\-ykD :!NR3=v+y,D+/3RGRTHܼ ಩ vyUUC֏q87' Rc E+gX^)ֱY ʷ $eRyT{&%lQ՜o0tˢ>$clА$'5[ T zF$lMi 4SC3x% 7nN+wO |%¼}旇W 0=_=[++^!JrF=`ka6x#'(FJPfSuCQ  \t3sTLR&0DJʽO|Zi-:T0#q KWt +V^GԇW{Cejۭngxe{=SNb .f "+<Ū2vv!D* 7TVn?X;Ь劏L B@s>)[c+rq6[WkfBlg!kK->XPc8QEVNvjId%v !+naKPBx4А +}c[Jx Vutt$xE8Kȥ^5x}\ *Z)+M(jJHt\qlE0R-!z';H Dpgl|fnMZX|^2{Z:p%KX6oC P}BR(+BÏWJb\CfWح^1#_6Y'dhs$Ȳ fҀ㪈@Qf;C֮--H.Jz8['%{_+CUrl ;fK6BP#v{$V/q\_A+e"mesU.1h0L_wK":CBY E+]r's(gD-%_8[P(gydHh{93c޶w #""I%RqzOFUjPҿ6x{8CBUp_LUVv'*yTIe2"JhTu2#!R%T؃L-~MJQw??̿ZQ)PJzBTY3F[h+oUcP%uς*dan.FfMD`@} KYۧACh,#c1C)7'P)U y/$ d5 1O*ᓡ* 6*,GUs 킓VX$5!PrZ![U A+Tc,uyyRhW1(JK%TBjyZԁVEdžVNR(8#w\SՌY!V*Z!a-h"Rm 7P+ Ӹ%" VX[Fβ|h$PH^`DVV:+vt|ĽDW$0+1q>)?]A@tj+ҕL}t6|nj ߱ 9!"=śdHOQ"p~ FlAr]] ]qyZѕK[ nb9E!+WO+7TzrEj,5ɒOme|E(pR6CWG+BX] }IP;[a`KlK _Aw)Hqn+!-іPx~Іx>^aim֥Dl'Wuʕе+^{JxE rիGKβ*@W9J̨ jcW4AWZر*H-#sfRO}GO+B.X|HE\VP)iieiIp4_??݆O8JCp~"#X+Wp>!_>*?WLϠV*W'< $'[zi|lC%Bn U|\ltה(đ |a]wW%o(* lي,Dx>!ћ }͞pݲ*7+JlKVlb+S[)|3R+=]ңa+8$ ]NWJ9dD'`2) cQVjql|qe~,B-T*nppWJh%padV@ =wV W*v|kpW&(8|Yx꓂ $jCb+ =U(=.|ʕȕ+`N9qthPsZ:6{Lb+R0h;J 1I\SL}l۶I[1iʕt]qa 5ɮ+""Da;CVWQ.^+n4 >Z1J)p%"lAZ\ZITz'.haR\VCV0[R-VXGߊ.r+c+moWtok+_B$ǡZ'>Z=Y+B L±"D`7̷>>Uٗ#$E0JXI}|`x)}x`}eH)SNX<,,~b˄) Xt_1|0jXXnc^>]0+`,㞸JXqk&w/Y@baY8pdP{64rV|YnùY:۰lh,DQ~_Fk+;9 )g,8G]H>WN&F,j; 6 "03\pTXkPS^G F5ny4?R+ %Z0ڡ#Ă $C<:"c^$/XlէX |~xD1:(v`Ҕm_*QU?SW WѰvvTոkK[yaj+vҎMv!}j.}vݳ4i=Adv MF ROe2.?O4Ȼ4ԣ/kme6gW1KCor=<4v֎:_v6v!06]y4Wޟ 94׵ĹjOEL#eLc2c1}? &C~]hj6,vS\OKvֈ -Mء:=D`r;ڻϲ9Ba%^W54g54h"Ni3ψ/m&M7e7dS>! #5̳ >$RW+Ʈ}D CFdh 1N"θ_sitڋMJy>O(3@WvsfOMKю/ N<=!oi|i]lAuq|i@iͯ>7驣!z^C!riֱ&k_{ >S/s&-IGCuInC0mG,#|-7 VDn='9\橝}+=w][Avm~İoT‘7ۜ/'?S3#z=,?!Gi| a쯧|R4.bZ"䦳c)?T /չ֏ěΪ^ztNwѢhb= vϙ xIL~vt'1ZnAͿ_O/D{kb\<}"?ӯ̗w~.!L>W˻eJW/ݻWo޽/}ͳ^Yqܞ$c}Un %u8D#@'74kL霼9t4i]X I\ FJ(6J 4IeЖԙI%Q,$gَ'-d@9,WXG,6+Kn ;I Y!U;AnY 穷 Γ9_ϒ-MB,2盎,!\n|͇l& Y%gk,|oYR/5w"43p,TFm2g NIl7>\QլW<EG#12 y# tǦw8k D"'E-ْ=4 IIzĒDSge˥MmHB=1iOHё6kN*U,aՄո[Qx(\ 1W%O /'n̈́-^sMZ\%H~b`#%eEҲR-jZEu3\SܟX&EPpJφ8lZjq}٦1kiBo,Ƙ;{>{!, 2vӼ;t- YeR2H}}FZAʕH \BeN8M dɔ݁|wP.iwsAӀebC rɧⳎZ Hm5fT &Cԅ1@GMB]!tq(͡@#H t>MQ.օ_-`JNaJKfN4˝UYf1 ')!mwjcX&݃L}-HXA@G:Q-<̏'fz.n!KdE2(^4^w-=[˭e2;Pk#!ȅ]"g^u0yx DTz@!.dyY3>C d ;/H^EjJxdt{Iȅ|`Ynx#q~)3!w(}t:P %!&54s\pHrEp ڙp~vq8ȪWRG?}5[2QBc\ަ}Od~ydqLvfLgw̮9.a\kH MD`6:=gGK;B}=#Rs{p%BvQ]$sC2-dH8*l\5saH;:5NM38:Y sO4wXA$V<$2ܟ<܀m{8{HXn:4lQ6% 9Ӝ|l]N^4L3\ʚbޫ,t{b;y^_j.N8@QX8>o6'#z,[h%آ!V*^`K1M:MӜn BfSiYj69V6-sǔ:FYƷ[v 0fI`*.e5y5UwP  TBPyCPlӃ*2>2kҊ%fg9YXPٳBMJВݏa(ց*截 U3%I `+kBaDJLe0~ ۰ ރOQUDq֝*}*HN*LAUǞmڊ7]KrahB+!ehxMS7R uQ{*f `Y4^;7*mSXҪ>6 ()7v ,T簊AVf^H,eSaw.@L}HBgU;O #VWūRa ibDTCΝ8~ *$-V@/![e+`+*0r!x.aK sHV;E5%E}hV̊GKV!S=8­|OKD c+x mls\B "V6Y/ZN փqm%<RY *tT) G,iv{H5I%l'ʶz Q 0rfg*:񙦼3򨈊o#*@ 0 z(` D D4Ӈ۟w%?DT&nK &&fBY$#ig8Th"(y$`:dՑ%h TFq`I;XޘD]*rTarq"a(R//+Nn*ϐ^Zfa`Ӆ9oxt@8 okFĦ7q,[{;! =4D rFaN$hQI/GQtܒ~Ir6?FaK];=rF9ڬ M[JըȽj{Ĺݽ Aa׶<d Jx`!Hw@/ T  jtrPcO.F`Ju2(0 #() ݢ&0fv`Jy mp0rlBE7= *搡@fvڒaqX rp):, Cv` [X 7&-SY7"IP$A;/ xr\(LѡL h@t1/1"W|#E/aZ L9z0I$n<7oonO~yĄ_XJ1aAN/9rw ;nqQ)bHDmWgCOm icV[2}vO'ŅyR089Y*iЋ9O6.q}-@UFy0R, |RPzmnFQBqUr]!=m:*vO<ήh.ȯnKv’TCyhWbjn;W>40jKު}UFPΣ'XJ{U!%ȣ>;^!ބ 4#P$~^q UJcH֦aL{LX|]Դ(6 AY!~fq3g)mӊ= qj) ~TH7CE=Tk7kL:*S^~{kkԒEa(USڞx`Gyg5]?ѳ%n Cal=_߽li\m(X +0rzH< v(c*_F@*e*zEu/m+ç,i4Q|PLFA۹&3N:UO[3A'f6=Q"(,-cH=RZ!IW!"[?Ӷ26~4f8n* E_"Vۣ0](^Rza LS~ٽAٽ ާVK1{wkԻ~;y%̕If9ܐQL{ ڇF= Tx˂FRDy(b]|5V COR#Zz@ ` %X,"`=(Z5 b))ڤ*H~uԍEOhҎ@$hnTmנ7j^W:njE爨y ?Mw> M3r- иwAˮ@)(A(LpI-dp1 E)TZ)R99b2G# }i/ >vKB*uI^6l(Ӓd+-hEX> J8NQ+~H8"["hc:D:AjM2nS RAB@FBCطT+!ft?6tA*/*ʩ ^GFUQ)d^6 zŭGQFU@n/u LmXʌv`RT*md6 r;?$sTCUS"7s#CU>8,E$䰔ZfmS埴R=iT+P!C*x‹rt8vˇ%|0T2 0+ZC*vާa@DD,M_,e#UrmH@yQa_3J옗PVnZU g 0v`*uS(||(,3&j;Oi : ?TE*݌*4e  q~Q)콶v-*ePiyd@`T/-TD@>&RF~C)+) PqPy^Z=hJGLqV~@ zG+j7%G*,jB\NfMdJ~K o!K,@Ax %$2P(@ LFy1QrLAr2)(Wpva8f˟::e}0R IRzf)P #K4hGXgg}|<`a(J9J@):+H P P=H02r¯Q&9$ b)i R A)dL^,}PO!ηC55т)LQd Sʔ)` Rؑ4 Pv#S:%A)S@*L~bBUZWS0V]j`(Ŵ3\_lE` JzxbL. )#`J)9O7@La%%> tسv^(Sh2'06m}s}a*^U=nBSQ@)5FAW/P9MY}:FCSшyy[UJ%-7]o3&PR +*_G6~Hx,$/'K _nbP &j)s1K P\BW;KR7=28b^%҉Q*Hʢ)F|V@Ơ Ua,0g#M0?r  -\Aӆl_^E'}A^Iꖗ nr/{yE jϫk(wͷv 1SMٵ^˩%Uеi--ibGnO`.qݳ !d)NP WrAƞӣi&|G4J37~tRWrnxo~#RAU߳N^s~6dipGבA@B@~W+<3 5k ($Koţ"gd`w2 \BˋnfH#J3G(8_ m6?_P($ 5ٓe-.N0HlO%msBA~ h0L_Z( ✞ׂ/+dۋ HMP42Ua0"b;D[Yrؼo_lۈ2HynvBv IH3IgTDžgvMvV<y.J2!3 Q!1/+_ j8X1w3AY~=4^jmWvݬv,O `U8 nޭd+0mf~Eő67:e-!>^m;Ih[WVE{e}B& ܁llPȫNJ;, $#"liKB/]vbsRWB'N O䟺THqkxR:<@z+E.(W߽yw~}ζv_($NyY@}4Iw빴ì_/꬯OXP}/.7|.,%MCu{{dX:]՜uO!/I}hHIMÔ0WW:$Ka}W1T<^6AOMUf8YuH+| yfǝ(-j 5mEהܶkb}H֬Cگjf}qJ/dxNOiqd@K5h)D :{F!fgrޅ0fWf+v¶Hch_=mȗ QV[YR z0{! ɴW!Ӷ7?)FFg]ܱ6ڛ6QZڄ#[e3¬s0h;(y^t}0!7# THi uPaR)74G\p}[)e ?KxoOSaa

-{U0eJE x?}w?_}o_ |K߽݇}ۏ߼~߿ <<#Sa/a__x~;o,~?||xrm/o|˳^׿|.o|9,`I 6I\9 dx" 0<RtѲerȮPa Xo7];hkF ĒJ`EG=q#j!/π"js!X6LY&3o!*I\< oXAY&Xt&Kj@&XY`\R(7 Teyy9L>%o-A5' :^6 E `GatRf*38@$(*9)cq{kϠ<Z~fBH4+ A{{-5u\O[ ! ]bQ8@YZo (dcI%$Pa;ȣfrҒI q4,8H\Ì[X/gI"?zڈ@b"KQE1\}+ ;Ɍ-pdDjk,Xˮ`A׳i]uBj^ f"ѯ[NIJ8b Q"mj3ғ̑xVSU.UG"q,@Bg 5@.ڭ$Zю ^ȣϱ ̅nJ\/[FuED_ ^%5FusEcՌu(L YO)zenDH5^ ehQފ=oX(NH^ɘ\"-J ,MY8[$6c2QՄZ4 hIR ݸ)K\gu1k,!r]q-Dʋ=jV+TeR(Bb,FKUR4+ tCآmAk2׸2鮌dURJ\Љ4Sb.'S_"/K/Іd"ALbMRZΈ] Z,ȅ̐:9Ʈ ׆ؒ<6]f- f7{mbYs&Ų 7Jye*c UW,AI&/dD+)TkDMW%],YxBfyquTz^g-JF6n֬ofpZd Df@ڇ\sz 9O>gI'3Ϸm}G1~=f1 0OKŜA 0X 5ׁo9Ii*(RU>L8]FFU{ʏ@5)|N#l-10'%gOiJU>fTzĩ`)Zpwl@DAr6d m,q1O`@lOAH=%v{?"2Т gX|Y)ih3Đg S Wn1eZ3Z8/"]!>iSF ГYeV#\V8u*zBuu:q7N( ?OgxVQL Bv2+HEK##Ș@?NFf|4l܅ U!xvvg ّrr_3+=>O|& CA<;ۛU5Y61W*in/sU%Ds|qn"l痵b7?X1z\,t=:|8؉~|so lSp*bN5nVaE}ItdhZ;w9#^],՘?Wڴh[=3a bڔn r`m M^ɧFKeb:uTvjWLDbѠB*!7F5ĸIm͕B)xbl{jHB^0QT@0O`=95=?VpkzzLoB*60ckٍ4bGƨSOL&v.8]vV5ҰIMo\)neM6)'SBu #:rܪnQoU2 b'(L_'mXmB@Zg tbڥxRn̷ \hv 4"'ݹ(puNIhPpdڒIF_\U!'vK <0CBh6lKLi31 pSΖ#x7l , FLgy.B֧ ĸftX=t0>wJ ~iʣP{5w:4sJF Fg%ʦHj)&M7R loGSeO،N(->[ }6 P}֨ >C 3G9{P'̛ JzEFdNC\T ~l0@ֶ;3sfiPɝf=L‘[,sG2 pSQ%Z߮ uIvtPz˩AZbrX;M4Q E]hT{fw^vg ͺ,<5Kj7@k2уr ҙb0tD#F:J3qrP#&uX|P!&88^tӻKdȘ eg> FU5a_+ T}IH״10EfGX"Gq ;{XA 90:rbxlm0h> Dpjݠݢ3mҘ09ͧ&f1:ҒYA>p-33Ǟ uwAV+`gfUR!0 7YbMUko\uP{6e{7HcyߦnZB<ئoycb8M) >&&ڤԟL 9nZ:GY Rvuu(h{K\)@>6F;2[jC{k*?nOy|Mav>,8KU>{eθQRb~ys|aŽ=琌W5fƷC<*~$bXrA7q9y8 ֱLJkɖJ?ml26t5 6 mO{\2 fKq8Rc:.>D̲=L242t΂"{?9x}4hJ$D}9/X QK9D8$Fo!R# JQW+lq> 1/Y+[܅+o!j5aCv+i-@v щЙq+ Q$c}J.),]P`l +YƊoxpSu?8G:Cw8u{\&jWyٯYd 5Tl^az79rJτ'<>u'k ;`}fkxZg8t<:P KPǟ}ئ286YgNtƑ%%sρ0U {#Gl1¹ If{9JW)I\b v@} ;W=y,-d+kjdvZN.dP܉ cl稶z?;W 6^tq1B lO}Łi7UPR/C[>':vUNB kUe@fOt*;qZaAJi@B\—3p0׎N'/>nW=cz_wPn ~z6bN; _הT~yqÍ>Mp|_8*P0HiK{Z| N,,,ڙX2I(u3sȺ5T%ngf-b){XYhP|yd^5s/4vrh{?Ɨ9/xmϣ攴H/39>{i4zҩ ТB+<8cl>Rg[+3LվDB֛ͣQ eI:chʠyy 68&EP#)Kj0,Y842Z hѪ*-=$4;j0 O\C4|-P[Ζ<ЩOK[Ρ奁2pԈNf_Ui{D80 m|&#?JAׂ}rNcO#aqmJn{7nO%Q L-Ǥrûy8o CgѕTR1y5ߤb>-n؄'<~Eׄ'gt4*N<lA&cIE|4Hm|trwͼM)N ^\ :6RO!*=9G \XKnc J㒢MZkϝWpJ0ﻵ7TvZZ+T,.k͏D ~WX\W7!'0>"vaJa#'*<Xu7׫y<0T $ -~׀yTo@Pu0͑©&dvh:1mJ=Xj?Oo?Oac &u5n֐UfAۇXx0ajhw!8Kw(MIUjُ]蟐OnFM왬왜H 9O$FyI& 5Fy\!>dMdC&yz[j 8{k"L)}OIYlF)Fr6S \DύQ i\5m%cAYo[, GbDU?,, ^aV%Go^*M !}`|ܣA%`6d,RN9$7˱" lwPf2I(V*Zy|TQ%݇t9#k1$ INjBJ cGM~jR9{'J&m픮)*PL&آ5Ԫ~oBhR[ԴR x)Vv~<$]6dQd')_l/_AifP_.7uvH~Tw0/vP HT,R9楁j=(m;r}5vRi_)WF2Hp 6o+bd `$rLJ TFjVLϤl}ғ2bq[N^c)>iV6t`ļMvFTU"M!+ឥjj $5ڸAGl,A*1t  Y)rLԠ-A#ڑKJvoK|2}p/f:0Fb&EyIĞ6T5UոNCgҼJc0?M'2V2QaOǙ7&\%+r+.Ne=\(G < sg 9նYf?<:lfx%yA](/jPHެH7@sBq]`ZZ@ *9VADfPl^=λih@9JhpNvyF 6VTlUdn#f&|rkT5 oƁ=Ӄ?X:w鿯vkw{R@T=9O <96~ N2mvޠkn:n<{X mR(XUP`e\+g<@[){J }ۏ?<Z?E4̛MpbJ1btM8"|.V!OYt @LOGJ{mxY*JLoAw?Ͼ`j_cuEWnxF]x qH:on?ql3o=p N@xĸأ;F-/'^4OoqqUWwK5-LvWC&Dl:ͱRp&d1yqjs1=J%.HoӔ-W Wz t,=Mbϐg&8k9V x2McfW|M!LROޛ$W,?{x hfEF;YHM8z5 sn6(}ZDTaJ)B+|ۜO4evaaz1Iќ +TM/O:Q{:|-gU3MMfN[`Q >I%Q *.cԤW 9=XH8H7oIFd{Ty{D5iy]SXM5o`dN4"|cכP٣AKD*O2xc飵5SwAyY%B) hy]ApŲhlm+ޥ?`0LvS,Ĥa5r*^K4sNʖ7rPE]he7h@D:I-{E;tE3Pݣt'}Zʑ4QP/^q4Ns1q<fQuAZ,ƭƠ)h*JJ Ip:W9\az&êE? ^Se.Ru YɢF(0,0225.(&C %5ֈUXCwYgr9ќ]re8)H&P֔h 4<GK.\(lF<v(hg=*Q!'.inѣ }F0t**DOi3rc,ӹ%4 (%( ˣBKw&+",K mdL<("E>Zǃ6܍m.Ѕ9 :Q Ǵ;c<=yt)tp]!eVQz$ȡ9 ?̀KGQMAf !ba뒫`TuO Z_Eiwpx rMNyPᬒy2^2mpg(c3 J Q4${dR0cyf@}2N.[m^GQMs7q$uCѦ@89ZQMXJO;s-9MSUKcͤcUB4ExQ @R{Nk(V>,2Z2ΎWƗI U2 RAIoxzgb &!8h+ķn ƨ6Xt4SD,ei<] a2i<!b-f$sVԍX  ,L"e<h,H*nm /8Ce71 ,^t!{QȳlʎbӗEQt4ܐ&\&VVSS)3tev˥:X%o:2Xr,Ê S%~a]|=)^Y9)RMsLcuBsxQMhΌlf(M[Ш!Z- 4#7 o%ɕ bv 1ϚgvR p,.m%9ųh8Mx+kpSZ 5CQbZ]jǕ\ &0WTv \xRQI:"Tc aL ((\N q5F%]0*uy}2 ʹxN:ߦSHH0NI%>*/R1%D!}.lA!i4 |3y2#)x5;D~tnW |} Yr.qvPUA{xI#FX6F3jUl 쎻Y0eb^,N$DozҌ*JA^vʄAM 2b Q]+CULjyCB¼nVe].8u/Z3b(ת >t=,[:gЅj6,c`V!Xʟ2.|*hDUBXiTU2M. 4f[!4D&Ra:@\:uEJ{'iB+c"^Pz[صƂDG_x+ *-]MK` _:/:Q:+@T;XP[ k"!e(l|5DDR %7 a \+&E XD6~*yAFFU5տn# ? CI9eVS`Kj.W[Gj~y5t~FS}gBCf)][o7~Dj8Q<$Ghxmƀ#E%d]flOw{}U%iq)NZ=p~XN!4_.E/I :-TB')(*PlO0'NR "We :p>AS|yo$qrj>]x{_?^uPN3}auƷ_;$9eOKPw(M[e yňp_v]x#{M_d :C[sk/}+YU|B=6S֚hV^kL=!qz^_8#*+HUEKpdN=(/ dσu-u^\E<Ӟ-;06(5~'>Wrb ɺCظdu#d 3onݛ'hYœ'/ճ.ꋫoe}Oo?|po_}|滯_^\?W/on^wܿMU?!Û(|"\`̥vKKiß=?G^|xxx|Ϳᇷ߾{.Ӈo߽M/mۻWx>~"o@z4cnݻW]^߿IO/r}tg<9]匿_<}뿟⿮vz/OrT+Q\3K:,2CiGSsݒ3 sdݤDݟH׹9JҠt>gσ$\.(C$>:Jxl ؟-vnNr-sZF[ͺ[\'~FnNH?g\YS2\gz]-Jl-Ey.mWtkLqe)Uza>$ ۽=`t|\^\ȎZP첄EaԔKtψ$ ^@l8x:^l۬"[iCG ?_`elY˝kFHs@a;)_2Ӏ R4Uz tVFn)J8@Z6k?%s펣-pPkDyˀ+J7~CV;u$`4<@#a*# f6xiH싀} tʾY% gHY{ܿ_#D> l=[Zjl1XvP<(]i aHW-?5&܅hZ I)0N)tz(27i'ON6TrlGA?`(eVRtVqKS`i=g:8Ma{9-p[5,%@˪][p? 지<o673Yfv90fH^,5FC"@&ZFqqI@R%$c᷻w%g2%N¿ք'Lt0@G eRh/.D$7i&'ӿ}p&q6GןCr4EknfŤi=aL[be3֮&j D}؜ Uk<Ywh:Sy#[F?5+1FK)wT(  * 5K7Gd(\%{f!B%("ӖѢ(2c!r}R6KWyl"<./{v!* \o-|#Y|ItW(A, \AiT-3g ƘhҋH MʪҐ)xkF,4 ˀ159|"2N9>6 d]“XՂ%*`0`Ig*.,ĢyRX<BB* =ۮE -WJUC:DUXy?p2m]626ojX͂0Y ¢L Hƥ !~5g5I2f_(ƛZ%avGN_$p}{<b^fXC&%)ceK^k!! MY]JӪ l1 r&< 4jt$XCII n  , !3l4r2h">UQ2,Y}`˲IHI2\I!a>TZlJ25E JBYb "\d(>[(~y^2 jM@qڶ h$&vTOwK%~NI)eo_ۏ~d퇟Å3ђ]]4HF\ɁTxj,5pI,Q'e2ɡPD/!͈f6lHKCL_OD) s,cNA!%v2y(")Hx|$7TqZuvۣI$Qb "U{fh@r5>S2jM0t # =,}n2h\ߪtR Kyv^UYJ6ZNkM3fet d9IX*0;[Ԓ[9fNKv+uZTr.&#a% Bɍ[ f5$p A `DD(`amct#),͞(5Ija!\Ak[c-U\s}75N!P!4sz :k411MHA]U(b0(&ذa.KX[q%̴iqL8+nR⍆YnC5ZKL rE-CnZ- %'tqլgfݱJ[9E$&Sor6g/gjV٪Y8jtLՙV ;S2BC*vjx̏a ^T0{|"%r,ʎ&)I+UdBynˀ.NY7pbq+'&@oG˭5Dr\!)7 V6:Ri}ı qbC Jy=2OYpC%5"F~OCҨ@)y0tS!fy9 DOZ@qrnbǙ&j;Z"5%;6I2]_ɕz7&S5E~>?NC??JCLC5 iЦW_>:ho!˥Pr?x{U~{FcWy>lO;+viB.V&7e{UasQ?K 6DL²0B'!2̍ClB bsN^ӅmOUKHGNzNV3dlxuc8چ *BȳƓklf+{4w3DZ>#(/6wbˇ Yf 2l$F5¹]_'"Gyn,96JR!Ji$@am*yX/stR |璧k[Cni6l!))MTUc$/GK% $n<4 3M E/`WRM(4cPC&iΟ֠".ܐV6h>ir^m9;͞N ]4Y%,נ,( sM9nJMs2ksGMz`!Ę#B!ϱ:^ i:Ԏ[VI`a$ [9m=faM"&%MzG 7yrC|\(,dD(DZ~aՕIk86]'ԦBxݻx:|) bl> ۖHܜU\m4dN̩ K3$MOV]K ^MAzKA tAcAsB|PY@#3 ԕYE3d4!&&4sa8Ɯ >^46P7娍ɠ 3l !_j%w3 4s?ێW!"fŽx WUlnu0.%->7IdF5y<64)u(W6b7?*KsRGk5CI($)G 6;b6enMY٘lGNI2 3.( G)YR0t:m\`C'#8Q"{-v'@9yu#m2|pX0 GbT/ y( OBG7w{M~:hfw*FZ4 mƶ"ƀv_O+'Hk44QB5orkðHRt8bV؝7ڎF[hu]6B'8ݷECbLȪ!ڳNSd8D[ՙԕa?"-XYئLУfqVq>S}؆F VfhfUnFhԲE.YHSxl5_gn C 3=Z\:O.*ae"DgixJ;b6J`/_Ht5Wcsfz*I>V!@ {Vid݈" Y1-8d|⢠gwʦ2 5<3 GJzU)EXPO,O` )qH8եM՜ۅM4<s\|A@>U.b.d JFNA^p}*' {H `yh-!פJ q2)kbn683`bvSrvsb7( (F&I*RiSPLrq!.dmwhXCha ܥ %r@I`?k~rO y5y! K4_b(7Uíh#hog9+ 8g,@U(so_@!E\ "jנ4m6cb fʠlWsVu9Νq\juU^R@A1h\ʤ;D/E$-`$Smj;9=58)J򸽺G7-:`s=fzi.`zTXQB/BsxIaLB1={asRsT×@[jQ͉Y Ih޾NX ZCk-iX~nWVRKVַ=sf-`F3\>gnt%`p,uSmMoeh5ycap?_P.*M}|hP쳥rob2}xT5je]CCYm;=샆 !DeB6EbX?W-{!mٵ/԰"I}9r}8QжUV)HҵSS~8$ԌŞ` _wؗj׾dEmJ:}PM:HxB*-ΫvadKGWحЅeN QIA dl]$X[j(>w,9e^Ք <*u8eMdTڂ~񣠀ƞxL1̺ lFpx,kSb16.Ҝ][c}FgA w}pc `640|,Xl@fT<8啬J#4rF*GM קq%F` X7#*,$>yjxvaK[:M @Q'tt}sdֲJs!\uBB:qSs,P>~rNPpd{j-*3êbi-9ΔCIpo} PǮ.~!p^pn[3X^?m\Uy hS*uUb"O.<^w6Fi]gqc,lJbadIG㸊-2'n[z;aeIy~p#[sZ 22S?>M]OII9'ŜɆp=4b2%=ИN |}*i|*95Z0ɹwf{x4#! B.D*)'W|Ң,S`Nrm¬9ڎ;qK܂FtE-v-i٦n"x1IRl+snjDCzփ(Jc/P m},|k][˫2 R~rʯfa5S)#?$K)܃OHQ{9,G,Xc)8c _4[f"87J~0Ƅ\ S'Nk켖Y{1qO)8FnF T=#mce+;nI K?`N5s2k y3:&Q6h3 5܄[twL̓72Xؙ9El9:Ozt|Y쾻B\ac鵬,z_O^vw]~Ó?7on..ky~{ͫoo^~}~.o˿fO?p_}MW2>zr_|vo_<_v/Y|b7 GD`~!<9G^ɼ)"\XR2$ ʑ>. 6lb5q˻[$n㞥.i&6ku@@#8-\ZW5N?24JQD":eOV}K>xcz> &zihi)oSHELCwy-O$ z ::lJ#x qŶV-&#E"iNYcѥ-e\NM#K4nzX2TuMHT);ɳ04c7Kn%~T.PmWiqYVHwV&NKP59W>qUtF=N(jԏ\z6_l0I"إ2ef+e\3M(dXB$Bː/aun }ڿf=8=`a& CtNlEHb~/ly$"3 Hd8pT* &Ӊ`|2f+.E8@v] M8`+:v2-,zd i Ԟq&9i@UP:O֣S,dOx[c?̶gG6֩yΛ;E1(a hQ[&6MjhvIA,9?*P±x?>q` Lݠ'%dQ1?qNs`TJqoՁیiģݣgO=kCfAE(f̞=z{׿ޗw?SĚoަWI'~{X~Ł1G̞}ٲr2!x__GgU;h".qauMD-4䮏Z1 ihoAr+Ȑ1@@uL kQ'ΩE~О<',Hr()rM|kv1X;"Ngz1:(ҋ8)&g Z >hhYF<> dj0FL$JS;-9jd:DzzH_AڝN/Q~j<טVśÇL@e$ؑ=7VX6yl2 ě&bY Omx:$XPl"Ԗ2:rYĈeM"4H&3E>\aE^|w^D t٢AFIggWDVh$@6mFS$[u @$l,*ab#Ta!WQ0fe3qN'V?(JK+oH*q @T#2FBnR)()j:T`=o՞.+Q²2h"۷4KRP!#cߺJ -!+Ű YjVH"m¤͜b Q~kvfm>0܌њ*LqVe6#֪BO 'i`}88ZBV*!y:Yh.n?n3))0lh<:-@WuhrKOg& zZOɲFY==S86ǣp`Q$Ɋ:&ytzɿBBdPT-9ӟ (,F)酚6r8w[dvX'(Khbv570ygIkJkI&ZZrHjP5HdR!|Pc&L=% J$̔`KdLD"ő^1h,(M$jYJ[Ce<$d/^ld(!ζqh/6 jl:J-z貚h|,xb>Vg"DZR 7Is5Qϖ}w#p14`f.Sh8T{(0"n9HY:ue63RޒHh(e&Κ̤ izP&ӄB%ůBo29'| l5^cqUpօNiW N?/S51ɣm\5M)b񧟾~Kra;?n_9Vx9UKϔ iJFheT }KzH'ՐHV͡ahL]a7B)PF4⍍S8 C:ߪj\#ڎ}Z\b;7Q%Y'vT3&i%vuYVWOPk9H[ٲgbY86C7-A쇥lp$aŨ R68.Teda3"Bi}Dux9 8W\b͓KEC & U4!͌tŶ>#jݾ1"W7mǩvpEf#ZlloqK$'o_ -+},Bkys<&b [#u9li&-(՘K_RrE c9W gh,xR8P2tieωAMJah j.cBni57R/)~|<NC9Ul.}Mh:c*8q3tŔ2RZš? m6͒͏hFt--EE\KmjbjV$`}rBPD0IO25JN2!/?<㥾Ke?^*R-KC }qac#TsDKNh׷y}՛wkW.\~N-SǯW?=i_]N`1)W=d[j,lk3[f[fRfB] }8𹮜s0ReϵjxR[g8@vݴ6HHga UW!&PKLGKsRB$ |Aݙbk&YʄV~dw28W bEmfיZ7d:˃5r,nab-`UE-nd8Tu ^1jGoR5[Z_Nr^'1!=`IYh̲/v7HݦؠF qE s"XFhhb#no:K#+ƥm?.m$[RWƿ]}X~ ]J9mDzGwG~}]M}~puzɗp4?.,˩E<dѳdFS^rbQbaA/}ʲyE1횄ɧ iӴD>Gct$jœ 45MnDv+j}LC=FegL7H#k7ͦBDTcGs7m0u;tm:ZyH U$ῐk/*JJXRrl3O^NVt)Q9&j:[fg uD$= J=K)>K9h,P4).9zΕ%P▢L@o$p*`>OŲƤ+e`%U0C8h͢XAa~ , y"Í$u*iuĵƋmx2H4RT&'LH탛g&QgT=i lm Jl/KP&vD"l$ltyZMb-C%crW$ Qδnvdc:jcnP4֟?4e:+]=ЮIh͙z2%Z~2QGW|)Eo6⺣'J xlzPJgE4ESj_:x#zŭkhir~aKPm=))SS*[:ԱMQI0*^Ѳ,<<%i8$L.jYoV9dQzJ/yk{/ƲXJ OLX?us8D6D<bp`"µv[',өmf0u fb|U7=x}13%URwx45b2 ΞR:)iWrýh7f~.{ܑ=:AP udJ+| dU|Qs~|ބ8[uvP3M\1'yC* rcm+7 +w:)g˅8چ !BȪY\{A=oVV-͝mC7Z(fBp0s"yd_`3́40P fpZ=vpNCm0"8bp im܉Jmtxp:9GOιh?XN8hhG/Zn[oG.p)wHѥ.˄rfTLGpx⛹2C:щ $Z;YgN& HX` woer'DŽ[E;.͖r 8khRL[:Ssyy:[s2,O=g5d;6[rj;s/=kդ#H*Tv3OYk=l+ OC'K4Z)a;9 T\ v;P#.)A>)HP֝RtL]F;;l#uh5ZQS@]++Ab ^WAs aԌkඞ'\`}-' OqfVuSo4kطn`mB3t gn+lqc9@S^9GR'_i'eQdHobsHZ˞`MwzqřjVd+2f96BA#q%ts1ĩ=ʞE6b!@XC\ٱqL?Xv!S#'(#pᄽ=t{䌜Rx+|9KjE9lƦj,l~fQ"mOi$%; C ]6`sY1oF^=Cnxԁi x{:M5lvBbsؑx_:6X l%E7]^- FBe~jzv m_ 0"=jCE̼ԥ *?|\YRdIB[^ve $tEm)PdIeՃ.d?UUz|m>c Wdu͏S-_"u6n(6|IeP^*=6I5h-1pRU)OJ[5xf,#Jb%Þ YGFrt\QPsȕs;);tW*'Yrj>4);sLH\i/nfj'dnAvPdbĢPl s>/ jI1CJX݅ZcȻ*ljB֦sސb -`boO[zckWm;Y6 vF >ka*ZZhŅܥX68qTPm5ԎC;JMl Kpb ln|]mӎ3ƜKLP;.!GUX'e뺯b 3 FEES FLLʸPjvŽ$*_Y@ "';|`.3{ MBާv..][D\8n֡C` ))GаMw..#^;=UxUπT1k}*wPTi~Vֱ{jĬD@t~*B#MS1X=\{: ZvpZQ 7mץCum;,--\D/*ZZ0AM6\zf0vJz/Oiu$[hutqimns.[tb]-'k2+E>m٪?E8׀6/nᏻ(KDcE 2 7חzwuoQ ۫׷u~}[$lcRv6NYN;uhH5ZQ7 >śUG*lz0' s<`peGFm=)@L^@⽿G6% ])Kv'@/T'+3 쮸A0fmjاMy]YvLw˶g*7p3tW#%6.]Чl0 \wdf3:̶1{r[g+|%m"*ji2 iq9S 7X_p雪h,N#\,&`+YC=:e c_¡6'`P~1[9X]rϢv=rMUP6-ytOrx +ԦS垨[sS0_E7v#@``r#1%/֞]d穙=^p$h- spmn9LsSV[Y2 C"yAVC_T`cV`8O IP\R߬*x$ ^_z9,'fWHQ `8Nkv0_EZԪ@!`֪q cPhBK0崼@55ec=8QX5fWdMTr76{tN5zu_H BӍRr`_jda;%< ܿ-/٠hop1W DžTm;ֳ} L Y^}µg`9lWĕ%OP=Y\EtXwF)a24-Sq`5͢!c2MAW&n0(!h`GG"!5L/y`QQ#TWnJ߈ Ѐ T7/#%|7Alvg+S^+M}gB̽6:ĬXzya 7^(G4:D|Q}ռrRwǠ(Vv ҥ拷,Nք9Ķ~WH)W/" # #+TcPer_Nxud 2" o(k6F9)33QLZ *˄aP_ӂ"F JF+L"4glҷA_^!S>z`ai^5{*k G0Xq 7)]W\ "v{Hqf|SY*OMM:E1j+/ ,_y P{kP#si\E (BPU*Il{;CJkh$ [+'!4|z10nmܙE,oba:ZG%hXBVr f[RB/HAk\k$h{_?ylVOzGx! k Yv]6Ugw~O]{#j8,6zW c}8 ~jb,Viֳp bBC23}koǑgChs2@8v#܄, 3gF7fCr.}SU}L<)OszETyfޞm>_`NnJFnng d\t׻-W۳IGl opS/ųsom(3es{AΦ\aC~>Ɣ)ols1Y>l0c+3xC*L&/_3^fP_PnaA^S"A!v% oΔ)XYSOٕpNned >to^~ûO|͋?<_7 'X7/ꇴkߞo4|//G~%K{ЊT ;Vo߲-[843Ev^(mB4t6*!{TÌ٣S逗ӳia.0r=`ܹW8vf&Kfl(g@&+ u G6;Y/3 o *$@m㛳FiؙLd`,mc~UBġ*&Jh=mߔ )ZFPJ+"NWCץ첀6*;4Gz;6M\݈c`^|qƦ8%;&+dxŽbyF)ftwtщ`j̳] f *{V{=! d,̞ #tNB '>M0|#hiqd-} @Gl7O^M: e#蠒)O'HhHANj`HPH ð*lAE>R(cr2h(7D1:v.''7O^uv:Mǟ>~wo?h^<mT!?}{_[ͻ㱌8oz?ο#>?=>>>?~z Ǐ7Woޔy}~Ow?{ϻ1. 9/%<|7{~'ݧݯc6"?}==e¼jE_h(6uK@Qx\8W|jG\k %v4\ѵA yxRvAb">.usC*=8^6kC]J7^gIJǍŐqX ũ_d?SSŞ!^7\V69/G|ywY>/a7wqʁl=ZI|q/G[E l&dcdB"2~wY7a㪼ϣc.1=7g`?†,M! 48>ˬT~Ny4@L]P]hAUH^\=Irq[L:`ukh#|s[۶56ػLf013%_`0uaD^/V(37d-i5x u5͠PM]JiӆDK}VV\G0O %vePF@e0l -`2Z$ sx0p5 :Vl!Wa" LU ܧ4𱗥ZfؒL ꬑԳvid_ eJ.|tl:Ov+C8vc]DteHz$p KwA K 4ٜPV6ىK"اqe*mNJeG.wP7 T9kBP 'Ӄۻ1(F&)v2`t y(Rb3Kwp\5,4ךWQ+M6g(rG4v:kw!ofH/7']bi1.@A=] m X mj#Ee: rs$h V!ƭTłV1Pq{/cPHcHΣ 2nVirsC۪Ka]]T]tnհSgnSg.aL_1Jv\H ^qz/a:/XF@ '=mln݌ߋϛYfQ`X|索F!k7Y3jg >T!c(Yg!c֘ osxrz~mJM &4fiN3ꫛ?ûG3}*z7?淅Qh5`|<OwOKaGUAX`-bV-q`jj.'8w ql劵ڗ cH+*2 9-!qBͺ09Zu.$0]MvR @NLB\dtͭ(w 1x 3hTWFԤyZ"EzHPhɝR;AUף3z2 1z)ā9S͛f1Nu),| M[JIJ>~&U| %pJè؀uJEHYԥ4H:ƛXA(eM#aϚ- Hֵ5rъjbO;%™IBGd4,4ptNiKMiMqm#|))" Fm+k.#0ݷ&^N֯eB.vͱ[6h\VV a!=WDu'iE騼pkCLj?&ik34ye)Ĥ<. de;YRRR$}{) ȹ z&YVЩD\k %謀åTefVDU@ДQ{C뱚Y!=X;V4m]E;նhYmѤ5J{ə ΡQ7u8P_>.j3A)hCe p N_w, zYo兌SNU;l\FbbF*WSΎ54`h Ɏ"Ob|%\X75;mEε)*6uŲ:kvBAqSnVnA鿉_IXvP}Ks̰WkA_BYM&1p^]M 4.*n㺤^ؾpx=Z:K!hnAt,k

|vv斾U9MعygWoo&óq~[#ΰzB?߼7o޽7~\}>;=MpA43 (|s7ξ9f&oXkJ\9*ebFт;MQSmoޜ^4:W(+38DkAy˥ R{cda[vcG+"G(;rıYqhƙScN:u5 cMlk =I:OVCէT֢p oJXCϡΖ-|8c8fXX8)yrѬե# r}OwNrA0w.;٩,'Qm+A]CY3+oH] we$1&?H~>R_1u6%*α\a8;j>CWo=E9= Fe pm]ۄ͇Psjur־2 /L\5m9eE۷X n9q a^77קO{,]5蜃b3TtXiN*ۼHH0)PlP%QG̣FIxL fՠ`k"rh$d8 FjSŽhc,*:v@F?տOw?5_7i8mK6UR*x1P$ըJ םUz,Eàj͹cRMU;_>>CɪZцJV8ghωCI*0JQ]X_\p)*NGEi04I} sr-2)4۴koEl,1Mq*KF:.ՕA1scN%#(*)"9IZ7h$=9k `W;8Q*QZ:F6E.R?X#i=+(6ߧi5%̏]ػ)̐Hlz/zhֹ KJaG ǚ~x5+JziY# s BF0rmLR,VUYOPB=eCt+nI2Kl!ktPMjKU*9#՜?#pj G$J¬N AD}B2=[B j_I0Cǫ5i9<;ksV-Rˑqq>swRF*=C[e΁=Dꢀ)Gu}Lә}΂GPxKmͪ"л{ pBEtmZӓO^޼|u@1y'W>?=r??Tۮ(\Xl3?z?̷?7S }3|_nx߼~7߾Ca?޾.{芗>_żsY6B?ݯr?}??={Q nNqMSZY<Nb,ss=-H?iB8N <\wDdl0w%3$ Rtȇedh0 #*#)U8Wy4-(|69Q"] v9f|*ci f yXY}p.meW8,! sTΜZů)ѡ;I;Adg& 1@i.2W(;|=^:ഌm=iWpkPH1}1HtpwJz HƟ|! 4El!<+5R- e< UDZE&$&L[5hgn.Ux~>zd)'U~ qN]DSY/d(@!ծSo`\mm׸Ԇbң΍0Fe0!5 %te6$[-nPZ_[28Xr']Y :q.~n&C!lZ.I蜻.GݹpwulH,=2bk|"Ndrrl̶\\Fpj ,l< K'ŀB2md%h̍l'[4 Wc_fߕ0r[tՀ8=MN9:C&(9K#u*H `NTͪ&7uB*1b];N_e`0^?ɣ:pD;1̪dEfȉdYI-5[W4~hP'Q]:M˰t k mw(( cdd>kfxT Th: 6rZnQ-KYK9EC ӋRK7j4JAm2ꋦLuCMbIV ;ؒ`jRsʉP 82Gwi>Ө6.6'ܖ-0rC>5gX,)GT)q)Vbc{GQcvC72kw:kIQȩF2ذ\`\+%o[(z?m4w 'b˳q-UGΰD VZRŞŞOƂ*Ƙ치 Z hH?+rc8]a`04<6X`ڮe34-B>|mCpT,lw 7Lgz;+H5,hR5&WiR eԮ MA/\Bs)SߊTC}vCܰoĚcVі+:ڝ=1LP-BejJ拰? UŻ2LɔgPeb}=+,Z*t^_gFc~n.j~ӂH{f-2p̲͖Y,r $"aa@9f;~AxfaNszV*’&'h3Iul:y HhEl_5xCM(/"7ݥjil\4YۭGٟqq6vyK<_{,zVL%^~Np߸I9W/4)_5l'QT>@@'}RUvԠ*Е^܊k{ YAJ+^'vG}xᇓdto<eNE9X |p4Z'tT yӜ1 _atpLҢH,D(%u*qЉ28)ܤUT7U6mGt@iEGr 8ƃM@ Be& `eЏ 嶧GлcbLFiYx X/־#mh<@Ez"YnAjwʉpA`-WTUfTL0T6xl/qDmlejJ]%oa62~ e6RHpk&@;@7@".7ox9nc˴k0gCƜkϤ>?H*#I /@4oKU i*kO*~2X1ѷMf6IN|*ް #Lf80$j# s(F=aDl"G̢8ߒ |a IST<SZ&"0<Ғ1M!@DkEjsTVfnO pd,>gxS)u'Z-Nk+$aS\)6Ea$үʒb9Jq rÞzu#%Z+u'8[W,H FKR0+u` \2$QR`CF_r񔃓quӣB Xޕ`OݽU7c Hx)`e[Kbt͵njU1Af19s(4gg(q:/6KGeIr'$(LS#zcVl8𻊯x,>RJWn+ 8Lr,\:3g:tKX󪟜 $J0[QydBHy!JĴ)FFGiyaAC``ap >iÑt7.Gf"$^dꐺ߽El\ۅ ㆆ+L -uv$ EV9ym@X5EOќÈXcˣE)[ -6B*B֧@בQN;>C{IPVQ$˪_/7m2]NWhhn 3B ֐UeLAեкifuj"m Q5ȢѰi' -*#*76rBWjAs*m6UTZ=C)J6Bv@i&"G*jqIR/PDh6ҞӴtGyka]Akq",$ 6-9o;7۳J+[9xUwxj"VNS@*,&UiR2,$q L4LVo ţƅ KsѮAaeF[6pbCZ1va) :tx2' yj)0+Τyʢ)3o ǖ. eb 2 @Fq dRM0~AP,X7J+o}Щq^dB8DצNas)qD )t 6D%8u2wl#b6n0uND/``r]=*$pi1B۲'!Pqچ xe;+,o*n*ceK1z"cDniºfw׷ӻ?2joޟΘT},]oؕx _إ#] MUV9bcZǭA|@ d,0(A/ 7iuW,dd] y"qq-'QcSg(gi*ĸ U!/u^^K8`X^b%Pov- %P̈^[1(B!<>_]$e5o5] BCr9}Y\ǕpFؗ4$Ml,#hE $'qoތEVe]b9w8;{63s>o>3ۏ9ٞ}ǝ{tO)sw].ң+|Ҿl gFٵx>Н>0`[>Ю5p}IۧdNUJ :'Pߥĺ TI+x:|r $Nx CMv,R/9b NEW:$^D',/ 1׈j2 F6\AAOvH$%'~wʏ@?Ey:h{J*HqV t~stanLf D>[ A$ Ɍ-N4Ay~*%:XEǺ3>xprHamT``^h]{PQ-yȀ"*J_J۫5$}QƑѫ"8  㨼Ei˩8K[AőXDtt'c)ʛջ>ɺdg^|͓'Op{/RC_Zڗxw?^LJ?? >~>6w{槏/ۗ?~?cɇ?y~8_ۏ;Ӈ?<Ͽ_=?7ݫm~ >}xw/_77o޽כN/|}{z~K7~8|돟=q~o9?}s÷r~7{_-:@S(|)Ivn݃cZAU8`$5 6`2q})X3p`?cT,XNqh[&gK\Xt߼"Z[WaݡC\@If[:Cwn!3[^YcOdo=S.vB0[G ;$ŦGͫPE-mALO͘q&w+ 4da^uL*rew1hP$1" h[EÎ锲Z19 vxṷ^Y55nzDUZ1SGeRz4io&7a5BHN;S[!쓫Ф }WY|裫{f5kVsAmdEYN NZgvYػv"vIh 9v a ӑEh5U qBlAoG9 BɁ;ImK`%fI*ɞY6nbڰu 'v9 faKWyoǐx/մBX#xAQa# 03H=mDMO-A5!_D#|ST`@lW~ .>5+t>\`AmyـBY'WvwhK()1MK,!fƶn>@ pdy|3UhAkF q)9A#NvW H;m";UrR%ٹ1`)6`f>qE4sECӏ'VRhqaDWq+-9UT_N˚ؼڹ=XP )wYDynkѿi Pq\DR-YA! m<&?aWYXCfhhnpOc"␟AKEGh[&?|gj9h#Ra+SnjUAA3*`6{>c> ?k%+/cp)Z840*DC?D N ,[: ycQ= ICꠈ³mO>|B)ƈg G,oۜ`ˬC I`2 4AS,r6ș4#n $ /0|P;\:TA B0*TwM]P{5Ġ ԛ,Cp#'  $|F$'z w|}eC˸).RyBY2|?d8p[``Trܪ  a5b4 ,Ps0?0E(:[Kai}< }+A٢!dm1f=rc/]_=3G̃3󎣈e4NqTKM "̔6V6`èv/$?d#391س8 P ruIS Zm BK3"AXǖ3$0rhKyǏxW8rӡP~hOF dߛ:1y~GӮ?KM* F4B7 \Ў(R1aލ@iHV8J0sS$6Hm99/NLf s82xd(hAGyg̱=>IǕ6 S)QYNM((ܐF>S6lG;e:ZG l$t ̉=Xm%W`1TԸjB Of¨! $%0  K](ptЂʞEyg`^I#6Ssڋ6n(ϣbOy;VĔ\A\5i)cFLPTjxVZn{3EeִPX˄d{bjl - B׭W@C`*LOF[6מoi*5A&]q]giqŜIiGq!J;"oh fkODnhTQ X=M^T!=!_a0HFCAt8^rSՉv%).i%zE!>r!/# uG:ysk܎l*CCP]"ie [&L䑽/~SeSV&&)&\do;]a̡H=s( ,O[XSL9N:⚢D^8^MB@׏<>UA|2s`*0,*+3b3T!.9I"!7]QbD[5flP8')Gř 1K; QM} /π1R"۲I6fQqR`?ۄ2` 5VH5٬tTh37X#J&k=-NXLw;61vMyO$!D :q(Kg5vKZ[k ^l0pv3.5ʐ@=Ǭ7DFl2Ջ`'3w0=GdTy#Byn`4naԱ+L O+>ĀZ:m 2o{¸vZY<cW*DOM3M.wQ~*3)/}d1q1]+R?#0Qso /|ΡOxbwv XNj_lX/r€nk u3+$)<|ĵg6@ {VdI+Gm',{ Y',6m=6gJ7쮅;% :E2K-1G#.:ZǵX Y~F+6 `<י'/U0HoG z}N~2~S$:޴LNl &P+׽˅GqGD ڞ-[#Hme=/x'OO?}* uIKAer|o>Ou{ }ų_Iһ?z0 j;ӆѾy'o_omTb-vZ6w^ֆ:_0Դ;̀pZ-`m|-f/4\‰i JF{X+9;7qb /<J0R{Pqmâ B?0|`K,G* 'j s V`"A[GU ;(9˪3'cD$QmH3"Da$xO> ^0C+-%PFQP MYQTnheU{&O 3ى27m9 'ڋԛJFTל :@_UQ!XbI9&AbXj DW"09FXV0%:?vk&Е4 Wh m"`iH61[v[!Eywb`R e}F P ]py:[}Ϲ3IZ.g2z3\&("^༫"{H̶fCA&!݈sVx1m]1WR{ ^ PNO`DzZDQCrZ׆}U&-#9@ٍd5I.%9FY@LeLiA7znL0WQ3._Bh/;HfP$݆zLNsSLc=ca[:tIYI*2,"vZVq pC2&Ba{F]U`D[؊iT`0KEFJan'hԟ*^5e8D@57ӸX&U @S2X-}hBы`ݍDΜޏp FdVktWxDUKRO [1EUOԤ32P ;&tGJ$P9O op46D=hU;ZukʯqjHׁuK1b%v%̠ĪR[% $j}FH^\.[R'!&56%=#3V#OBl& "Ȍ*NĥX Td^Ps㛉cr}Po^Wʏ7;raêS= 'ݠxWwbx;u2 O1\+:}wk8W{؛oPY gƵr l7lYd7Vp 3g8NUL_ v1ݲ)MS1v7 `kRfjWQZ7YUQa, 裀܂ZdjAFbH4*Ԍ¸jHG̅dHVC0b?%/0t:h9V˛% nb8/[\f̓$C^W!ZMC'M`@k̭_>05mAP#+%XԳKƧFO-USf哊yɏ*aaC\']Dr%H_ UP%ti^%wPca&s+Y&_);GJ|[mGJBvdD Sz@Q f;&oЀ`MRS> ao 2ɜYȞmء w@H.P[$F|Ƙ+Y,7|}Ё1*W8v7bxo1fF{UƎUqp{pcx R߮Cx( ‡JY\)k@zY^3ٚ9z3v_F}LU(M*pдkf(0]0~X'22&F{s,1׻2NrƋ5W S/uvW6 8F3 zq:"B) q\lQV~HET_d_]~%+],5}%"LtWfhWB֐z0UW$uOٻ*eˈekci]BpQpGa% .`BT $^A0E(lEZ/UZF=0%w+W f(:xwt|\:jnõp /VЦäyIv wNLGE{.OTL$"o[l+ŕڛH ۍ9hԕh 2+UK`ރ&a"! j,wZu@ (Ҽvb3*l6 zY6{7(Ntc_)N}((+L/L)ߘ;`o dH_6Wu@ޖI~><`qʤd+ ̚͠ Z>a.*nRo4׍E\k fxav XtVW!MIcKF>7};@cLMT| I;4)o 7/*z,Y go:]Gtr$Y+%c6$Ah-sTp1חݨ)]+\I<@>}_Klث-=!xZE!ĉs!#9SR$AC/j0z):cȋ)[{:dƣrwr9,v:; YL7sR)J9y)X7m$Q*{p2;V2!p.Iw^h9Ov[7dN2yϙFk!*VVi"ӎu)T-2p,y|ލ%P(C&xPpY/׹ .% .eiǔzqU*֑2ϜP'-!V<8{̪6i'`}5pb%*YyUBw ZP?7QWb[QApn_=٧O'QT0`!ŧV\UBN݋n9UOW~Y y=u\0{?FC]$ [pv 3Tx#7HzX8b`ϊ  G"(HYۻqޅjXatR]5X]̄a!wE=$֌V|)']I"{?BZg?Gd1Y!78|Ns ƁV'CT5+CӧOl ύآ7|߿~z{𔂌NbicLuտl6NC}|=v9ß_~zKoӳ_LFGo}|߿y??|:?yz5G.$O*n:೧f*BM+[+D.P^{&uq.cQ5!¶{<'d]I '{'Zv8s;P3[}. yylin<s/Յڛ |^κy=)q_-"]ElcMFe^% Fg]5Kjދ D=`3aX($̈́M۽Co- y\F56u[ZC]ﮱCC+o=}æN~;6R&k{)9Y@qC#ذ/p\' faLl}fH5gT=Z*[Mxh_)I}eUPV@'8| u#^WUG9CJ=`?tH]s)m&Vs#^M;K.C$u@D~ݦQ(p g}ax,2{A0n0n2Je^tC3!}`UE7ƦV1~nl%S:l'(t>DLՋyGh-_ ui'量iEtHAmzһ&ﻚn2vB;t՗ ׹7ܻ}zmKG9{Lwa0 ud6%NB]nBnjUFo#&C0F%N_R >3q(fgJ.LwX G1#uy".JE< @]d˪w<'A,LFGPh˼Xo|̻v2oue1 ۑ&< 5S t&|i롹@6<b9} >՟G:ˈNÃo\!O\=Băzx,ZpUjHj8"e87*Sn7cэBNN(cc:~/<1".;~.rtuM;i$R>.eyY6i:7}K:4Y>dEX:b` 0sUǝX&:߭ʊmV/[uz$QoxS7N#e7iHlEVnfѐʸbU^}C R 40"ݿ24v|NNߠ%%(Ҥ [>t|N#o; ~a)DsV2|Hf26ÉKD̹EGګn9Gnw;=Dkdd[ψa$(6oHQh,g@ŋ֐ߓIE6DAK1@9v,gvΪ  Ss["#c̳2,).n+b2ɐ:A) oʰBFfw{G9 ɀ%)`⸪1YXF9C٘8.Jxŵ>(%[_z1FWjxY֎/@?BCR9}[Ǒ3?'ku "tH~DF 2Hjr|?ޕO"]Iɞ̓df׻[Ozw_z_}q.DmuKyO>=w N?2} ]xW!׻J׷~n+M ?nQ@7DVw/'7y|\_u|mI;Yp<@ `7턾A(%M+|dxn?\h`ߦ&?ЌC_~Gfx{GikEv-`t+>__5;jLJڭf%ŘEL),_vd(>'Y[_qQkTq&yNꋴBfqxt# E1#D%ӒaMEݵvN vJ܁eyf-"ziRKzG _#ʙi t:]\:0$@'{fBnu, ʗ\}-yvF݌[Ps?kQ?-j3@cNP߹7zM-0'􏩝6oa~JEl£;vt =~qAHXKۋ>)`Y1haMo7 'Ow)x./x3(Y Vɞϰ8X,:q:㓳L)88Fbq̸Nj{[`J}\~%RO[5Ն5v*>'H)!MH|`qmsۜs^m<%EIXS$S>o^l/|g_gKK/_ᳰ,/ǿ~x_}᫏?>w_?|܈{>?|[;ׯˇϷ_}sѷ}jSbhӆ8˧?o_<==_Wˇ?|W__o?{?}ͯ^>#__>|}ǯ׷_v_}>|/ϖ_U/7o/OnM_~t_ů~_nS`!ps|j"z3=8&_~ ~ju9uDE A)9A@/Ex,A] В:" pCCF;Ue_}$G0i3WH 8 ]vn@Ob 2>>_ګWq9O _ -2.(=3}-yUwI>Gٸ}0o 8p8rsr=r 8e1{dؓl$^E}Ԇ6c(Ȫls**GٮCrb͚)[I3o$pߛ-'kkFDl^!.HWY6 u["Kc7d㻘:^?, 놘7dK Qs鲗S\ OjL g'1Zy2p:x*1q4ɮX"`ذU(c60 Tbcă~k1ٻ -+y)+Xb=Gt K.ˋۋo^zU߭$RBZۇo޿ߣ?/߾~|/¥EU8WV k\߅5 o޼zmߧno >Uu]C'S3(thn@>矿?8Ge|SUQL!jڡԇ\N aS n F`\Ԍe_[:5ruXőt'd;O`(\FUGV2$ej()qZҮ,̚5gQ$#ZRQ+.Ɓ7rgrr+m;Qe֎to:"n'yel!OeZZDZ`}lK <ܭ]b-^mi[ O*6_ T >p׻IZxPYZ65 #rjbLxMW\{X-}_`>CJ{<7 ?ǝtWu-R]@~~?c+$F5}o]0h+ٽ~|velIi;$ljqc|ֽ;Mf锄)5UZ}uMqz}/M@UJB&Fm|OX8VCjb ho<[.&7c>r3-%LGMH@nz]ʽ*Z2lk=. `Ubgո:l6J2AL j`G]]p mj:hN= RU@L&f֥*SGcSGY(JS|T-oonk%9TjFN@(  #pBagHq cGDrOF])PG6(`:YQ L|\y;{|oRUQX4h<|ul0!WG7ǯK<߁h2=G3ڔ8Tf`cՆ)wAߩlvǙXJ1Y`[$jΧ!:@Jn^z6 ){dkp BfZ`rk*ؒ"lXAg>0֮;ͽXg[;(4<̺6TuzyV>ĕ% +U n AE3nL#d?5ѭ(es~ۥZCi9͎4j'K7 6T5.T:4:QPL ʄnPt<=m|-a*XW,,R$`XLF C%''rA7b7x[ vVq xVja~2w}m;O]$=Q  Cq)r0 T&MzGq2L3nLuoUJOT&0(OA:{cc n 3J=r!JH-w'B Qf'9QC%% Gd1QҪ2Oxߖ5ӹ}m`0eƠ5!Q<h6[SDL&Amf!y+hڒ۫P\R8+ \$rם ]X5u`BOVSiM"}^H+"Ae& B -AZW`1Ϗ"h.u[dR#pP^Ey_H{G %lم* CtIEp@bWH-;٘ cҺR#ߖ`8a&g3V>ʻ<*< 5Yc2Um竤MVrjF\Åq@j#VAVO0y-<$9-1U(D\M@ߪg1"|V]>MH}W-L/ 'gk„%Ƥbur/N6fs&+a^S ߺ+5LqE"9!sG6U`RЄr0?e@υ2z\7#%5`8sg8|1SSs*+rD/I3#$Xkz"+RS8X۳B.Jū~c")1&8.M͊Id8R `\֤vl/\kdS܊Q5hARe]6S cx*5j$iΎ,24x) 冀׈Z9f(j|qz53+rFT|ŻH=\` 0.&МȽ\ YWHu#W@Lr̤r;#h4w" 4L@}~.5DTD[nnь>a A%aaɚvR&$1`R,!% g͛"nћY>HCFRN|0lCaa , NBUb=:>"`M#$(b_CFݠD3|R2|HSCTUV0s58] )(͌,X!/2( ee/@ޑE9X)|,')m߉y[!L# }@*0%a Nqj qT7"dڍ4VB5q%9xh6Я%OGQ Ύc" )-&eJw DScԫإ{!&j$,;0G8GT F?V-fF0wUq>Z$#hܙ8Ԁ#qXU#dmr'iqb⤨XKqN]lcefxhmᖢ; &=]X"Rֲ ˴zs1a*b"c_>NbIž۱b. %%hF ™-H;)gwٹc".p2Oa'24NMzX4S+@0U mIl,1NՓ< S=uJ +'WML(ƪAVnJ>*+Qv hʱÇX9 _Pچ)BfW=<Ǔ֫>S3)({\P!FZRB)t5C\" FbP:!Oj{#"ŽAvM=T'E BKk.R'OʦD ͊%p4rFd!gpMJ@MwP$[v~ѵ 8 .aWb*lq;"R ˿pa.&IbHSU;dkĮ\Py3d*ͳ^|(e!AJGA. o/OEЕ?AO/:]$_t,$0h 0]\4bJ]+f)P*p'HBP4s3t5 Rg&5ϟA 2?ۂj,:ByAqbpߦ+*(]kmΔli ZWh(Sǝ cAӆCb {"T(,XƃyVZI@)[&)3Z=KdG iha2*;)B:K/"BIbJ]uF)éhƝ$KC_qyDuZr>^C v [bs(t)BXSs:D@mKrY0{d :C=) D R\%KPI>*LOJw*kūʚEeuU֒U*kx+yRMYvAU֠*9U'UYS1VB)CTtȅۅދ FZdx*n(X<6\IWZI{y7Mg<4#ZfyLGxTV²My2uuF3i'(J5ۊ:T0QuHh47' "VaWƃPDT-Jt_Q]q {P5<}5AiIyG kޑͫ>o DɅ{I-fCQ6 yRf dI0,ŹVei0[Z!L=ca}Ue zG/"&iu]s2sQ):= I3FJjV9e~R;ƍ?}tQwI$nkPm8F%VEUљ>&]G%MyLH&KV6_ܲwv N)6aX[ٗwpp:} |I}Sj?Egb ]HT2[C 2gH0gYmSmj6ӎGqŘ5U5?36RU[Hr:u> dN["rȼ4*d0mifNK5}oצ67Òŝ8,\\0Mh1!\~GVp8h (] Tm}1NqT+=::_wڧF ѿwür}V,鲧|ZNsTr88X}e}A]dԺ@qsש0eVLiE9>NR xV&Yh5O}njQɞ8[8>h2j^3]`Csι(Tœ=sE"X1WIXTeG)r,@a]ZY7(SxKɗrU4׳OW).ѫeKd_jم[K{ZKm-]4?R?k-fe,ampNQQMV''9 %<;wQ=,A.`dQ(K]r434qt8Bcw{nzHi);t@Z7aX?F'Mi' U3Ⱥ>\"@Ԓ_ bz:.WƂ-0pPɝ:^}lCH{}Vh}cn+kmQ`KJuKnW4Ŭ] j$},]x;;L]ɉXsڙ}S7Cb$,0]ugl4\V݌L=$Sdpj{r4Ea3.'>i 鼖4$CIQkB]\LJUulYl GT>@B惠F{\dnkdr^xh}H PL]y?RTH]9i7y[4ò~7$DLeްy̐mf_(`?*aꗣj4M~HRr.-S6N`ߡypkVun {1pN*!6-U gAqlR@PmYy#92})f"Vx*zT|cfq{ԓn|~-vIՉB[MѭN;YM62Uy"6k'$Hy^4urԋL#%j7ή1f^@hS'v]83klbw0,{JRI-☗I-WJ2jC_2mJTꕽ 8yq2̵GgaJU@;i`8.0窤S1oEVwh{4uSKާ@Bh߯$fvτ{ޜɌl%L#[d"@O[mH;XɬxrSVSP2-Lqd+<S:ۜy1M-iLh*:I6Eƽ<:}zz TQJ**9/WNXI[lP9ځaO2sT@ޠ}栫s7`.XJa/.g5HOyYSw{N2+Kc;b2i j_JnAUIӘtNҸ+WB7E@0Tx:1X\T\IN̷F 2S=i2ӷ_ɍ;P&1s\E|3hVU((<,<4kL4J":F9>ӎKTBKGo1Kf8uecMn _(M5750J讐ӽpTS 0tt@Of5 ƂUw)(rBUZ5 }wӖ47&P#nj4#U4HZNVPDT3Wތ|Yޙ`TgyMgH@'LIy:"9tB:(V]9-.7gNyi4"[R,U(L)%]8$9];hHDŽJJ*΃6eZemP&6^lϜkZiJO ;kum>D[!:{#&mZ_fkuG d3L;L>Uxwx޼,!҇(BgB缔8 *-]9讴≝פvXJHZ( .!U3W,1j x#6ɏ}0j`:B#O""xx]\ym"S7 "gM9~-I[̈w2>+_M_EoKĢf jNoVUeZvQ5lpi f?uRFA|ޢZ4%]uS"yy\TyNKDs+c_J<'΋C [SUϺ۹#MP%Kfdi@MBi ۞2g8JqёTíd@3J9ΙE\:_^L:9ϣs sJiuNqIT]d*yCt|T/ ձ@FOBC,9}[x&܆ OuqۚGp=9Ώo+YX6֩7֨5AC0X9~^W`op7i8+ĸ EVȃZr {tYq!{-, e5>$3$@\*צ$Qf/_%T3sz2_ uQ«njHwކ+(y[$!\UbVҲVnc 68$egY+=ifԛW8p7UgN[9rԡc5dgEFBSRaPp@0Bn5j#HzAZ㎞K^nK GuaM`$'(\\fN.K:@ouNHΪJтup1Q&f7Ξ8R{|Y *6c/ jrKzI2[LmZ*!31y%cȱ拉kQO#woa׵TʼnF'2$H JC2X$M0b^ lqʪկƘjV(+Cp%fEl) =YC}P`B- ӖW*3(*Ե$:'E ;'7#sږYQDI[As\'J\ՎM;LGjĝ ٸLkM{5k KX F`,Gʶޣn{ggђ#*PcWƊkkM`E``}б1-9֐-n'8i sp.] p=->wd&h.|BK(LDrm$YfvuQ9Cڜ9~t{^ ~Y~bJcSQ!YiG4=FT1W!®eHP'$4kRvo{& (%~CUva݁jn9ִJ]ASK4LKՋ'\4%ɣ$M-0M׏_8cf^T^SJ'EsIH%dieL?JץNA3hR'aIhO$MxDI#O M\GW-Pگvi/0S&.X<LQvco!??陉x-^>{?<{ _=k%g_۴߾oo߿׷?_x^~Mgu!֟ͻ7ի~~}_?/OUbrxߗ?hh_G/])k'Kly|??_LJë׿w~_>?w|x[?y?~w 7_~݋}W|_}w?|?n/{_\SO7s'άbUmJdQ+TJe8;3D((fmAA<"&)sqCV򅚤> ɍ RSKzUڥؿMgvf*I!Lս^4cD{6HقYgR7%r.󿱽>$P3Ŕ| ax[%wX/-%8qfl#g0|7J3f005S5W_pp+o{&iV[;3e#_ 'op! t”8]lNY>quʩ;ȿ 2K5?Sbd q44,h21 ΢J͖#2Q` |\)cӃⱧ1+pc4i" D*Ǭ{k >f( St Hie{{ P ]|Έsx oо<˂˔AؕL\e&݊wZckv od& y5fx?;P=A#5tw"j"ƸJ积1KʤRF ~iS02b.Z1 `;U6_ao!6' A4 Fj.ud."^A/n܍>]{#Tr 8H_ doDj&sNj1ۨ#HH\9:)~,Cfn1wSקuxRK晲'-ͼ=B+p>-+䲭*\WβBe}GvksT'ȫb&n~:|CܱYǡlt]u6:v&TK)/BM_A$&gV/߱wT[>;>Ԃau ^$(n8 (1={_>2]51m7HJu)s`*8gE4(:Pӥw`d#}UFlm؁L%‘2*}px.@A9?;پqRƳ)A.+`@zDRF xkq&P,ykl`Au@g<DCTKR=SecO7J0u&N[1d-9P55ꪸΘ] U! i;bypn+ul#;O:;"6ı P*$:zMߙ 'I<1NLcVrkr%>&S̈)>0Ȑ)ƌz˻WPOO'߼zZZqU8ݽVґZ9 ێ(!dV5VƲxcs]}ZN\_< I2|uSyl5X4uȁ=)MdttDJn!wJm!x^]bhf5’q3*Ҡ+ W %UqSoW$:SI',v)jy 54(swejU $Y0rvv6>w]""fh"0L[!w^}eʁd[ }.Ht.Un%׸hנ/dkOа>[=<<:իz'o~:j,׷?oׯ?뿾 ZoЖT^J?돏UR> ,'k$<'EE -,FL% @`]qб/4%~QqwS~9^%rv(@\DHDk+`ջ]&}w' x̨\!TwIeHUmST`ԫ!mhx;PpyYMEcm4Ԗܹ{{J%rҶ\e |TzoP8 >iGV=ß#q柤|<2W!t0ouarw+,]dw-ɺ_"SFϨs͉ Ѐ;'evU󜗄2pq^JɮR=lJ ;s1Q+͌;_EU ]ӍퟸWTII{QWҝ&ħwdcXҷmES{cw2YXͷ"reo3]NsnQsFT> kU8-s1DظKN#+5>ssgq%A;J7-0ޞj{`@c,TQ71$EG+ 4i#g Wkjc㹷=KIP󭤁|SW:[w*CzL]@'GkfFzVFg 7]ǟO` l˟Us`}K+7۸\ߣݱap0R.J# GJÞ6ݟyB8hIFE?lJpS*٫+?!2Sc"}Di %F0i(`=ZEab~ Oůl/mYP %y,Q;Uz@<Q[VT91:U]] J֝r;.2 6{sF6le!i[V((hr(MמG8d>m7d9vV7xiu>T\u{=펎Z v+߫(j] N! f`8VEᨀL\Ǡol;O克v4e4Pfg }@M.B ~)> l~wGA% >$#n }/^}~xÛ_;y SzFة';Qq R,cWqxuEg"ݪaP\;\}ۛT;&woqV{/t$䋁NS"ŢqEۈLqLv"JŚy)x 8iW/OX2R͝M n?'YƖ|H]_3tJwt}Ă (ilb\n[%[ٌO{T0G[C;]iU$-3y~]%\3F\v󶻅Iy*pF{S5kՄRrrXbO fFM,;j9`HIYT^5&D$+~!7sqJ&UH؉y5PܕPlX jIRֱ͹$cZ*55#tP2&8fq4u{S|`dRXWUnHwZ.MOkWdeJf\&uUn+in y٫/^><| _R D ޴o(So߽i2kymY#^>OyI˨?ёliuV_~/WU??G?>]xN^QPi$mڦ%G9$2~M>?JHB}|T:+ j,rfD"nO[ӛaG+l;=5^dxLnw}P=G04nIW9 \- /K!~ NI zmy9('cx.n !btyƬz{~r>Fem_\p w#rT^5 r 2mO` ť;V=v+kn7OtK|vNqffD,ޓt&h,K},]N[m,"1vLN]6&4q=rt|pd*[Uu7Tѯ6 <^Γ8YWkxNzFFu4c[c POgŤv!S3S炪0n P܏lˊ]P}H`AV.:jupHR1nZS/s_8G%=u*Ez,HU+Y$)q5.R|}?`4v!O΀ploہDzsɨ;Cz,֎g <%z@A.Ř$cv veإƋߞ{́8VĮ]/߶GednM.s 7`bA&gk N#(4UwjO#ĎQ\ EEǙβM:(`wJLlS>!2]:PPejQ?t5CbB;TmԆcFl 3ȷ-X߰E #.#M]1#.6]kTlGl߫ |.꠵Q|(X2AiA )y3!W&X]gGMӵ nnշ}}x7?~C'aEպ ֳdI9sձiƑ2oT[~60:lS=zW\'VYmEbVӰȃk.^Z' XPe-Q(ez_4,sUuPTÂ=n^Vά)pM21[@U4Х #SN6z맴+MgLee^ .~U+0BFn㜻hd#8 "$r^(C u,&JEFSzjlx{oKm irVFW($*qtMCz1l~#!;}4Q3+',Fh%]uITՌ٦ɸҁZڔ,W!(q)ILZj"kۆع]o;xe8$lc#jMp6@GOiYG .ˁgO1EƱ?[v8-V\Mkjr:ffUv4jV%[{3uؑ"̭Sr__9Ɨq} <^~OO?+2OM =BOom㘅t~E֥3 %j_&=z.MlỹOw;(cQ2[<@;V]{l+bD^xg+@֦AO [ZnV[;L<QպB=/QaDȻ4_`1w{arA*{2yoIi{JY1Ub150X, ^!ό,F8=[; lCbG`OHT9'lZjOKO(I} mJZ vk'uei IZ ?lͶ3=ZXBg_<# +c`Ykk\%wfRx،nu܁'(CO@"s)n(*bA% 4HUJMjiYDK i;Am]@(=@$ *XiB2ڿúk]E;vK+agz9f^Fr+YTޤv^=tP$}یr;C{d2<_㥏@R:\&ReDZh^ EI mQPS#BG%,&՞V17[Y)pqNZȇո"aS)MhkfQ@^e`ISe{i O bpt Z.;D॥ȑFVS`Y> ]Ac[†0 " r L!:0d +cʇ{`կ!À<4?m!כ%6[,vIuG>:8Q 1$t~)D3`9tm4Ă(VT-l;~aQIA _tA#6FNvS+Q]qŠ0;beK͢iG1:#6L0k1-+QC@a - ,j=8jɖu)2I%Swz7V!V! q3I|A-+gv | %ȺPf@gx _%Qb#4 BW<>gMUV]j۝ FK h2)kwwZOl#nTaKZGq)F@cRٜxy`C0`4$x)w OUѸ.p2YR  jxk@s$WiIըg "muc}zY(h>2Ժ|6/quZשy RZ:>GyLk=6m?Y%+~dM:j'3_$&_^]d=slN5[]{bW(:S呡@-Z+9CimI?:'񄰂AXN"$2 ȈFU^HD@Ҍ>DPKGX6mIz<̦Qܩj0'D-I2Rh,-c F\"oBoZaI%FΜ]iK}3CO =)>>#|@*$l48.p(Qܦ <ڲ7vv"0?n?Af`pKJm]8'KZ,76ط@ıkN.D(EqUثa0bz]4WMCj!VlѻIs@(rY. qp^\nlïYk2FصF<Wt+ > K -T PRA4@,:|t<Εμ]VS.X(W"$ +O~yV0,'~N2Kr$+vV|nK߁Fjul{P|}2(% |@b)j8y0F4 &NCLVqdO"&ELaPkl|lհXJZQIմ DuGx BQda_!ڕ gőF }Bd!ƒ%W2ͱmfx wӾeqT,AkJ&aMq:85<=|.dh&qpq>DH{t?S:VyPp`d7a`Q1-=ŁA]'wwl~V5aV.4hr+z3,GĴԿÑ@h pYx}~V౅J%.qvgBC6}[hNy,Y9@;fh'# K `úݫ{[{ƱbI}aź|_U3s?jզKϯ6\W_^x-.xf>k7dk.X׻OW;յ5]\lw]B2tG{\{}zGw?]m=-;*#yG{1/ O_rKxWqmLWowڨ{~ Q jrə(xlON<* nڥhw_}{TnI1fUova_˥F?iJtZ܈oɍ'Z.>Zށoi3`xʼn?2`pKlXx6&Mm<K,[hD/9 o ('EVx ]D|Il !l(FsmRqr|u((?!z ,#F{_A#$Yw9u8'F.ymB ϶on4q$ 0ބguoI R`*_apZu/Զ׷ jQD`"._{j`^l{~,w6<~VIV;,yWq,񘼼d{_ 63a).!(M$dA8@#B[ᝰQU½.>;"H_j6}9L &G㪵 <tPDrjH}*/ӖzW8cL^!ޞe`Y@&lO!m^S[rSiǥm}D zOmcRDx!7 >?~?~/o~f~6=6|f~?/o?}ko?}ӻoO޾_o?˗'+k?—{Gڊ\n< t&x_p\C,pw];QV | uH5`0$8M#ӹk V1[fCvh1+F%d QӁz;p1Vp^Kڦ\A' V;߾$fWc~EK5rہAՐL9;>UѸf|;<(~T%phm(Bָw+M7[vO@Ļ. v{{ݹtGyV+G:7B^I,-lQ^M `7Nk }䈟tߡcw)ccSx`D6Mc_2opꦈ%d8"EFEXMbka^Fm^R $ri-<3ܿ.(}p!3AӼ3ɟ@GM#f]e&L`l >!XqZ!Zd.bg38`,C@*dzŠ 8Fe I,QrTGѯOhC)c7`14&T]3p C,P#1vBTB ld’ D2ՋmJR6/5**'a11o:%c; -SO%^َ#JR^~X0 3<^c,7P!ŒŰ/& \l`g`D0>`t%e:ó \!SO *HahŠ[cҀWt5D<}6\BLj Xq~^YqkܲB%]tYWm*$9)"xۢ aMGΊנߍ!,%J}$_J(W;scdL )kw?(HšBGr*VI\]jx10ʋW3)4ac'#xOE &Ń(+ ܲIhiq5t1B'oÇiL$fb<ZQ1 |?--DFJ4k߁A9~˾A֞t!K" C!Q % U pKb\f[p" EB !=,rͼ"˳Kb<31KbחJ{ }%B\~)qOH~.T蹀Xkdm@\.@# YAPtJ3;q,[4cr'g#4Yn1ef~xJ3u:HņWF"+?0s$s 1 3CaXI 0%$'e 4sF-bd˪pI[`!k!> 5 ƁB;!Wm9 O"Sĸ!ƽ0(iqv&RFA5fg 1J낤ZVsr+KL* ߱I0m|WҶh31/'x|rd/z+: J &yRu}O ݄$3nHf©/UA0Oi/a␴UtڄWs5#8tْ+xaĽl , ٘0p`nE>Q!/y'RC8\DבovOsE%5*Q@MB2Mgf׀ 0Ⱖwp D<"Mhf0d#?2-{AqPB*P<Uw:njI+&D/MFD$C8c CB3gH$QdNBr:aIdU@gT^nEQ`t8Z::BNATV6"R#& 5hDb8%e#J"&@WJug[K G(q baaȾNQKV.QGmyQj{ALq͉ c&d8 -qԬ Wj8,;ᑋkϒa.ZC߼ؠjL-Qj2<_ܧpE)iR6BU*Q8_ d+dzjXU:uWV1b$ISă @F:< gm0(vC2 I4l pDy!x:<$3,-d= LzuB+0LtxѭR".khIP b/ϳ=y J4+dD¢RD";ZJQɲ86^D2hrQ˄}&|H"Փy  [{M;%  <:]^4^_ƤM؈NwpJ"b*G䌠NWq,x΢ DkwO Aq2dxȂk=-uN6\ĬT°,k_'Rlm !wXqsV"=䁬|CoέZWTf"sf pa=c/Դ1+9v d 9>>1G_-Б ߪ.CbRKsL GE}Ǭ-&< LևkC,d S4hf~ =͇?~w1{>aw @zZ4Ӵ ہw(ݎRc2p`NX9MG.:ƕvGpfp/*1P Ax&v}[P Ek XÚ4EtV`V5HĮnu}"4*erڥP)- |EH#SfqE&:Y*R CpLP4LZUw bLVQ)-B-K:gg/_' 2t8n?=^D?k:|xܧ:p5pnYby1^^}7L"q""326?1'5&i ;\ug c@6 n E-Z$!0,^ ^((#|S XzwY5\}PE@8:*=7(.U(T4"݃rS"Q,Ķ#:eđw젃 A2X)8 $“B'|6RRj$Mԋķfك[D65J `8IHPNȎHۭ^kbi$o$_'uI75I>&[E<|j+b ,6pzPBY"Ɗ+rf(t85I`"^B;txÅwuN\l= p5txӽ % ^%K1KVvJ->yA,OX9$G(Cj"e !db;߮6Iqy9$-)IðA1!x%B< qs[!8OB7CTx6` ԼP8S(H=6Aýևp'usɿE2;C,'4eē*mL`/jj\Oq^WsA%āŭXB6a ^pxKvұlcZ_†;)ڼy=ZᇶQF^ĘMU|G]$/ӕD?syGD#KғqA8_vQW%a! *[/|TOXcFX8F<[F<%9zlX mF<qt3^AR{2BS"vY{Ue^2Pޣ Ǖ 7pݝr9 ?II97 :fSaoPkWR]`'Ë' $m =:tc=ftLX?0 &!L`m@.:)HT%G "8 02$uslR_!H 9ș7Z7X6Ѭ:\vAC횤Lp>P M,}z"h`um b9GՆĕO|3HNSqnc_.jE¡vU\tfyq ;VLBG&S@V6v'lϽy%asYIV .+Cscn.ĒG.hr6!\ -`rZK"DH4`Ƿ) VrpP!ݛ8JYgam ;ɏvs`Y;-ߨ;?tTF1 (!+$ Bvܹn [kaZTO ǮѓmcY $+W֊,XFw*ZoNsIbz"Gm}hƕVD救 nv+, sIK^i{̀11$ r)M\huPX6/ƪ]TyMP84x=eo'- UUXŠ;ja ̤COvI>G,p>XQ;tNz(CA6+8..5VRxY,^+61X $Px#wuGYf&gxrD $!2߀YYII&WekGÑkWȕi;To+W%Sf~_ iu$ W U @̑ʖ'i I[i̿1XP<+plWb_md̂dxpI~i[ϴ2HQ#&\Ek &Ioz.,M]憎C=҂ ĨqIhA{V_{TUhT,pNaC/rF?(Rkb3+7JKq7T3';K ;(}\Ɨ#xC"j]Jac |<8ci hAFI޳4T`;E4O25rn1GL6DU|H!|Xo6@^}q-Ig͠g4Uӌ0Vhyu'eW`AT ӻXTz VgyŊ?[Bo;~Z^UAnU|r+'IԎO6Cq E6(VQa?P)z xh|.խ6ӔgG Iʋ{C:UŬ@\ر۾ u7ڷ(lKXepQY@J3GYҎ1,ʺfLPk;ɀ7 >;ahEJI~A06UaKQ26VKg{T ׳af 3_d3r%EwW1S-j/C8*<Ťxיıf_CGE0JjUscSʪ2A":NUiRE^U ${4Åupwiae[npc89hqtqd; 55a ͆*o%L!+sqtʏ Ȱ,g|twO7@"%ѹcJ7pge~83 c$^9I@0J[UdIz'݁ۯ:q˷Z9IoLX>n@iA!2K4{Q+CvLT %;ӠX٘뺗qX i&|atx ,GVGWRonA /ls^rV ^dO!khTJ<lobk+OZwJ;GW΅VuE:G+Ms#,fm;Yǖ:mAFfsx,ׅ( س'c卵!hVFZp]֍泝<{X08yި !@-0mk׆&@<`&\ĂO]T۴ s}iM[5,cSG4uT`H}cb& p $nAZt HWs#5uauTYK!Sty긚Db<CKZzT%@ӏ˰ozGZ5p':L`u, vQx7mOCl=1<Hrvxs n7UMk!3v[q"%]& 4"JVCA"NǤtnhB\TFmZ2XPz,K/l e476$ R|֍d %=c=ٯuJF tn:w=/uP$ 65%'ԑJm&M!sd-8mhJL#Se5[&k~I^}+ N;NiIיd^~z馒_|ϜsiSg9؇xŒz<~I.zooۿ}8*֒v6oT5B(P ]/ z [KbB&=-"z4 հ+l}r'( yZiuaziȇ>n˸U9iѧ:e9O`R+d>v?uy.3CLJ٫C2`sQPp4'XZW=h} Kt F,0ѾYԴz_Qz,6TiP/ȧa$ŋٚ&Nz{3Z25/A:Ic9A,Nc0\m]^НypDtwg4qzb߇m" ٭܊5P;=_1z-6'g1 B'w b3s+T}Ĥ&ѾV/5CUhC<|zl"0ML; G0Z$~@02>*ͩSL(?^>ƐE4Hc1v"%.߻R9'ܜ 'PiJ<بx՜NY=$*sU9'QIxY|=>}|ڙuqo09SD$^xUlY) *z'Gv;Ud's%πOo^^U'!z&B>"rl84wg۟齭4\W֟m)ݝͧ/FU>Tfu,hn{MHe{uC漺v-kvc}=po߄ە?=-k_~Rn?WNW.99V7p5_G*<2U4YCmA'X0靝!, tx0[NRQ]@S q=3-)2$MW=.aŜ;ģx͜rnAhPLo.Ik-nR+|O)]JCa$}X_~u*9ݹy$K'fk2Βy2w`guOYJǧD_{j duYMF9n.Ԣ#1+*!$o%6$?oS.O"][6Dr?S NwX6>Kp?!{I'c$iI9]Jϙx3bgs3QqLSަ8]*3tMS8!dQ>cwESI,gYn_N!!$NR$1+UϖzsfstO9zF;O9$dNf'LeC>؞ⰟӭMtI0'? |tdƹGҤ߱HhEqٺpJNx4{[f7UXs9]̨3g".L΢ʨNz*bKu1$SbQ#X]:%$1dux~ݿnrw*ܢnJ7=!>m-e*ݯT/Ƒ;جBY7{%gSOPdS&˟=[9O E)P3@/}7?in:ePtM缺NRT#^D/;Ot9,rg/-/Y;&ϝ/E`yx*Ϳ.7yko;M&?^iޓY)-"Sмzv,4=v1jO]T$ϛO$ϛO/Qr'y<Մb x f>p*s`I7{V%)a3j睭 *d4"vr9+ݝ֍a/TSvx*ai`0IݰSIS֞tN1֓d锨31N>YOҼޢD3(NѼ'l6Ӓ>ȟyzSg8Y]47Sc&b $͛'Kw;;_K OмOh qtbyIw:(ZGd:s֌4o)H~b׆_hP+м߈j?b'y|5ӼxwST/GO/9dhLp̅=F1Me L$/">{0;SH Id!|$>I\Gozk+9d>4wY"iy&Ui-ݫ`@u:j`X}UbNI#]XqE020-f2,BifMO,29 yW5_0-;7?3>ɯn}Ɔq??o>{sO?w/0{{ ͇Oû>=/_? o/v}}9W/du?~z?~ox_ӻo~qz?Ƿ޹OݿǻO޻r,W<|r?w_͟߸uQr2p+gY Zl%x;oFǍL 5m`'gE.\nTO4j"\,93fD~62<Q4g*s9hѡ+Ą䨽U$*,II)\_#;!Nmq|ň⬛ϝK7Zc4ADB1Q8Y+ɩh5+ YZ@?ah%CT{bj+HP+T@:T-=!OD͔ ]^SRZq$yYcHO 'b~C4 DBBΑa_rylhhdYA(f&bh1X$<>%֓:,\E6d׽*ς.rLXk=T#-o<ƥ8On!!q#~12WD1cKRWp(hB$#jFٝP?,呫HlzrqMdh⅁ɨcBh)J\R/Ys߰>=oufE%KDi":O/C+kN!b\}-IjʦPٺ]̄#Bp*i24!>PjPM̥C4EI7Z̬ьr6 MLAyAεr{ful87W\̚.XiULM+3o@*w.b${IuZK`N450E"w129gI&Qz]wN&RSGDR&1j8XZD3oOD~ERqE-sr WE-SPjóW*ǷXon_޼Z9S0~o/o|/3+Q,gz9ӭ_r_3}ݏ_oܣD,`T0vW%fz X&ÞB!;uHdN IS[WAooI[6ä c|X?f}ym*p%SQ L{OQz񯾅upgW}7^y\޾C&Ϧ<ݳ*Nn"NT b\H-$F6N呤KH|)CV˥E/2N!{g!b[[}=ɞp<tv6Q ]ҭ &!a,6Y$]`DXxC" rPؔz.pEZs]ZM=qڤ|{znB/Tys3/Nc}ɷT-yF`K m4x r0*iBдKF{I:c*z:״G=;vf`E`SaM4 a`d֊hSDYoIPd qPL*acs`9y'"x/B?Wp_2 G`u@o[IL/rS-sIrOTyٿiIy_U{QIW]KM,E$?g'#p򭇧ྌ`KH*5l^r)U:I➇Ǚ.HBF&}C0#ld!d WTNUcă"姠] >RRԫ+S{=)*h*whUr{ .=@yEuG _R% -E$8\r[JS\-^r6RGAUd1ɐiD\N=A4<yۊ'U1yBA} N;˕pv~#^e|*pپKpsc`< ,2G 10ɧ>8)5ʵg4D^]n/Pn1GNdiڤGKf+NUaFCDܳyh:} :pApwўLuF&'HNM{Qe:ziKgR_Z]zʦaɨQ*ICebKDy{6+$7˩G,"}f>#1W8HH?}a\d ӆոУvƽ# ez໺:m\\o mz۞!෦%sR\S^x bΆOs@p`߆e{z6&U B{YkOa',y>Ξ$*F$ ^m!.=y̩ U|цzz[&2MWj[jֆg!x6CU*WgO6꭭X1!W6_1E֜۱s]t-զ`:]=(qXqX%5)gX3°êi"d3( [[lLd-8e1+1XKt; NuvZ!*% hz5<&mqMb-^ӢqX޹n#z̀L`Oe~&tq6k20W]| &(xyPW>逺~QW}t*UQv@]! nO/l{b(ʩ6t 6{Ӓ JeC8=;͑J-OO{!6稘u؜9݊w{mi&Q7KZױنjUG~ NM{gQ,r;̭X6=Or}sO<{ x8X*KCÑU5PmmsИF")YhL&E> ,yuО0ǒS߆%7CHpO5F̴S4#ɲ],Q@/~kF׫=w4"Zߺ< ^BǗ4aUE',IhPZ0$Wn^R(pr1֋bSY*,Ħh侚¹㢶`HvIv/sj'D)A`ʠW8#nk J{1֌1j3rF s` pc]!-.ˊfÞ\>[n_&Ǟ%l=g7!, v~?^ގ|3y gCz"cv2R2Mb#7pV4sClVid*OV FW͏dqY.-Niʳ, M#:yzArdkB-v"#ڙM޺\d䊏 1v8}WO(۴BUAA{jod=  bpiYkKhv;ebG̱S"QI[]'0jKT=dؾ6{Vm|P}X6~폹Gȴj-T gTwlfRlԁ|oL'd::xIl4ˍ*Zx@||t0_'heAOpg^;!=0^yqĎGUۍ6gȆ#0ʹ}HY4MJAVYQ p@zf"P'ԋ[{ O_ꥼ*P_* S,EO,MYd}*a1ˢigp;Tc.slumD i~Y}ӓQ KRIX07L{"5}.`z<,v%KIC K2{Z9QJJJUi 2h=zXL~I1uƐBŠn-G&!edxzqN z|.{+Wȿ M#yo@Dw` DOhC1쨄A`QGNqpAZv)vcҿ%5Uڣ`XWdn;9v(#d-4$GQ(<N'GN.9btF2.0f/w KO$'W0vv/}^c@ Ot߮ kBJT*-5|LY'9TQ4al ^USTi+a9Mgg,Cf8sc 8]W5~<_sKqy'aS)-&lL%U,v Tv"o[dɓMK͔.B8ABh QvCr2 K$`Tߢb\'^%vHQLqE#5ZA +[k"t-XCO76KWrNGɤɲdEdn~.Fa._.` ţĪ@Oy!—h@F:33.#rm#ILzXERG@mx`N6")3\ҸctV?kJ2*A+/ΧC+{uދ/,h|;6+ lDfB@du 'Dڂ4=\-r ګ.cFYdgq`xԗrh%dfSN0-~)<ɭ"ؕw^z"D:?5A(0 A$䃹}'}4&s|LR&@Hͤb٠m&ܕSIYްV57g[ZOmU e{mt3L$ c !)) 7n@$ԵIFqH*W&QK֢wGid 8V#ry䒸Bo؊NYvY_Vk'k7]l#Ql uȴNWEI;m<ǖ2T'u `5Ͽ5@G*#ۧ=c8ʛX?-uP >"&fh+,9!Z\TvܰϿ(iljUoX[4yČM.7ԬırCmbnazK,6Ч\a~5ZfRyX~ʥ z"AC]zOšqB}ҾYϢ&ҚޮWO(N{$)ĖGRA\m=CDvŠQ2B^F*4fy`nĹY%pjG@ځMx8bghs!rYql}4f_Z+ oM 2C=JuE!Ԡri@ 1/5*J=nlL' Z&pMhwABȍDEs5v4q(>9NS. D0\~A6)m{w!!6Xo'~Z!p >ݫ(ơ!Ow#[ Se\D3rLTZ4Eo稂Z%I[P˧(ǻWXK34dKNh\Vktu7& ӆG> ee B:nCax26٬-*^ 7}N>Xz1T5uF!3_ e9xl` mUY6淦뀘&pv#"O׉ZXE83 O7cޮB{4d=mGS^`bNeHi0l܍N"s8۝"*R׉O/0^ z(ƊSSY*.,чVFgpаŲ QzZP% BSBXyC57Ԫ^ҿNJJ˵qyn!*.FC,4tQhO/24b˹n}09BC ][6~ާ,%tLy4ě1 @HHҡNY;񥏚b]xINl0_&N(>|fR{M[_|aN_~5Iد: qG3w0,3MܾI{nm׭YU?8lLuȆOY'=8iicJLS\~Gn/.Ky+1(1aEGK(bzq~n$c5 f9J O&:i%Agp˥rw)DMOE%7컄 b~/ BլNyA$rwSåqwW<Ƿy+;WϮnϯƾIZ~yf'݇/ͫ~͋ۛ7/?{#^Ik&}?[K黟r:feWu߿cι.f?zl$_ݣ޼??~7߼{־ݻܿ>k"OܽuqF}u{3ϟ߬?^=t7/n~0=ߦ_~y^gc +6c`҉˸HE1 a|wVݎ𼳥{4+C'ukTZ' CTI`,NmalWNu%ۚT&77n&"1eԨFOXw1 ƻީG`ӹA^ *j[}?i;* df"]=Vvق~89Q]gː&r@CrFV[}-:ٴB}mS9mZ\4]m}ƪMZf]F?' /_Rw nk]![Y&5_ubX8^kg_5pk:u^ę02ʿziRR8w|UK!ﵰRCVU7&U&>uo~2AKrf3IpuBbm<;g_^:A$Km=6ipx"2vvY򛏃ay\>8;|"pq-F}仓LHR˳,NAF^J].2]wJZ{thK+Tm'PE}{fV*'Nrɓ \}yqERI~T*[\$7st̬7ir8鳓)H¦ -YZhe_k>*HR^)y7w@6cKO)Xovo",8m+Nwd}?8i3C+M҈K"ږ2IHfRƲ,(>ϗE񁸗`@ʸN&tuXVɓٱ R3 XQ%lONpǩNN{oOSÃNehQwst-;g9ALcܿ'N⮨H6}LƮJMGjLG3po2"s:(b",_oIW6i9w[Ag2NLuӴ<Waܓ+]3~s;HA#8`'q{!8𖻰S JbչisurG̾́Q묄YJ:%KPk> +I /$4FԹc"Lܩ6)>1[J;ch U=Ą:WKJT-ΪqH -)\Wh A@K3}U֝De݌LH)8!HA`.1 _@^7ŊFc%Qّ~Έ{vZf{/,iHAyb7,(ER!$M`!@G`IAѐ#b 4B 1 )7GB 9wB#!j Q`P9#'kP-J*&L DT\PQn!mpUwF$ĮjZCC#ʯB%!j.12@cd >| ?W=xA A\adOz(;~хȂ'ac:  q‡1N!z̲ ]S2ӶlOͫB@^vޜ `Y"8 A/3j{rLֺ[B-p6u(V7`ɼ)( yVε|L5mcKEX!mf Ʀ\S𡺖!Zi:`V&^ٍ/ Fb%(h!?˓$ X+X*Otq)J~VA:R`X9{ijtej`ol0L*hL#ݦfψWj+Y dNnKQd4 N2&F47QxNA-tpBNLYDt o ?VU ~FP5H,B`(,sF%A~âDe5=_TޮC%ucXi'#@L}sBCLXms@ "nhviA>X :?<}!]o_$㑀@@D@H@<] F 9Is)B̤XCg#gut6>V+>KsUB*d#H9;.b)KSmꐖi JT :OP"\-S :Z0MEw]y DO _W&.HR)~aZZ].Ya:ni ;l֌a8 sQ68RFdW12a /'~9OºULZ3GLaRNi͆(EGT^aGlSB'3ipl>1'v} SJ$m5 VV{ U-p]P2?V6pd";g`KKUmhSK, 9ލ騸Hf@%68ov: #N:E}#Hr~16>t/>Ɉ{mx$*y ?Eǜ͌TH]x%N1B?~ wwuA] B7`\p&jGF*,W"6*M؊I4´a/͢ Ⱦ'.,q vO`FXx3qZM&0LSeӷ$R6="م7y"ӧ !Mi )^=HX~|)#}=q;MCvkOJrAS>fOϟS|r܇@cpzЯ>gK^_1/c<'_^_7;7o?~6 ɜPȯxxuv9 QF'Cʲn.gyf9P:U|zu 9(@>NܕuWrX)*'v}ўAX+y[-#i!EF xl|[yɭ[ˁ˶k,;گI\ ‘z@O'\_!]a#(qz(+FG-#0pBXGߣl>W>^q?A1xe(b=3f.OA?f AAoyJp8 ^i>_{i^sNm\ zV/,"b|@>]iMJKM>ZVlV:Z.,t]G!xش0-#ieo)cL[p5w}C]=8!9"/ٞϓVPi_a(zHT|X4K.&[o(8}J;bM&ca40pjU,R0qR ^#8fBY:d\.ŀ4SO+Mz0JM%GI.QN5O0*9] h% a`2,d,LЦIqD6i7*=%i`fqi"Td2"B%Bd[TOR3A&{U8j[%H륲$6Of  @r'A`գi]w{=fN,%YYE ^|lQ1riT^ѽ/2K[YU'eߪOpASB+$ KѪf@H0Orݡ3haFbep }PҰ :3 BC9/}[7rp,2<"Xc+ɣax|ȁ 0aYK^{$@<KՋb]߹u?B~*]Ju\f{Lm|~{|ܪVxg.ږgr,Y_}|ڧ7ŗK:6Z _gU_`Eg&ćW[ħGBH;G(ugs<($ ~ w/.ħN@w;Y<+uN,4ל0N/hOٰ\ {0BآNi[b 3%q@x!%z;)in.t}z6g?~^Ȩꔊ7o_~틗>_~..B^_w_߽}ͷjIcÏQR__%YZORSѧȇ}/^_}W?|8?ׇ?ǟ/y߾}O_?xt}Ee7/^ot}/M7___sDFyj>{1T12FFa?h굇f\t.εe?% |Pp5Wc|kxEk] 'A:=y>F>Ӂ<_z>GktǓ VU8w%8釷ˍ<*yQ4+T;и)'֦tnc6.jcl6n@H"0)qhB7N喰7J垟qxxwzlj*'Fd, VV)K$rLt]qDS\vb`m!АDQ5IT!{nW7o(N< ,0R+cpA6T鴠88%Ǒ]Dj6?lk- p/QPR& Ʀ( >P?x ዊ' H,x"ڴ'rt[IN*N-\# oTE Cpj7Be_Nw!ɼ*Sh өoJaAy8 )F͠7|TG&_*zFЏ:K7#t]T&#"ZvѰm 5B UNxNo TZI6.>U5}D5|"=DgGo߲$g2yьhPaœo9J֭W\8kչPi\Ts<.7Ͷ=.X>,as EzK ߆Zl(XZITN&8K=0E1'~/~S.4If1N\E<Ԧ(]רqc\(ݣ[pbC| I lA-pvS($cPjH bc3֍7.O`41U|<ήGf 1[4Y%#,Q/h@%EknHūlEdf|MGKf:%|=lH(:_g&+g;aˁ V#*RIYZMP~m\فG8Np.҂dOKtH(kNȧhM\^x :qT'\N&TLO9Q՞ \Qփ`TTƐ[N,pSI:<.00HQj'>JDC.JeѪ#+ Z˨l{s0"Ew#YJWT7[A2GQ&VrSZ/%FH li,E-rHE&u+e..?XRd,:zjEyO쿻hEID/ijl45T, NF1b]ܖ`k,.ݹu<̦C#AKnq,حР!{rJqoV?YW%LACœ*q]Pd͠җ@tFf7%I0\:s޻3ʇ=\ITj)dЀTpe3lJHH'. cv/saCh@ ~ 'LU&Uw'[cm7 Nv7':Pb$Ηlҕ% pA 7W08@bbf01ftak@^y&U&ND@"3!WG<0U"|,6o~2x}V{"0Y We&x>'K@Dc̠ftvȡg[d2cxEɚC*%Һ94:V :BVm93rB4# pS;b~ۼ"`&/Z:zܱ`>ZV>` K!M; C܂ FE @JiLtg dBZKfx*~裤V d!#rSPGeREJ"ezmD]2椠IAVejo2HAlY1R8eh>Ks E59 ƙ>p2FfTġN/:LM(!G| :*wU[6TJq2&KvRlX32<^|`5?öTtY+?*TgaV0.V״lEphB4!=nҵ-GKN|]: 0&@f:mE  Î'Tϗ~3C<dKzNAgjd@d1 -Kh‚%T%4 K*,&3KH?x>Є'e = KHr0[TGaL.06PIǹ'[hLEU]Q6$ c,V1UD?ET!@Tm#GVnR=rx'Wԧژr0+1ɮ:B )(lI+7=/H :a;f CMB%: ] ד)vN5ԇaYNᚆ1\CD;{㤧\bp*[8MNҢ-&^_@NHro0$ey:H`ҕmZ)Up.H%gpXv`Jg*L5Kx֋IB%d%RP`Rl@KjvԒCܛGօp@F$LgDD{m%`%*ܗT1%pU Nr;`0`G a Ó6U_`v;)IϨDYQdg$žH.LhHl&;aN!UMv}.Tޑ($_߳M0#59!eW6,%}Q*;ݒxmCa@9BZ&LSP ̵|H& [sNU}bs =ͽ U;r9T"o=4ŎJdqQ%!&{F>.#sd͎&peӉUՏNQ^aҁq>UD}#hf³;?bO 1B47թL_&ʵZ ( GH\XO1װ_g۳`6q) UqC;/8pVlbq9$IcJIE,a10gEvkg^pRHBsAIs gRRwʀ҄ԣڔo$I@c0HoD@5|di_cIH]W2'旫 ˵fQ4h:f9|4S_QȀH9FۜLآhA2Q%;f)5"LӺ+KWӑǓs[{FS9.[1V' Slr+ӳΦ|̦Ƭ}V=AYt">9O'ӳE @M+(뤣 o,LK2WydK89%QZT9*g(c¿Ml4ʡ#VVxEx !edF$@0 ӦYma1{]:iWh,0s}`2\%jɒITJYr&d;Zچ!3 s7 ޾~"mfmWOmzݓ0ܿMD= DEV(\ z(JQ@45O#(KZy@'50։{)l)qN X˲GzzV qRO*mEU;+mm3ġ,=y&>EGZM+qd b8YaJ8\*I8(WF{]b*=1ܮf6zP;<ӡf_Vd#]]u@c+uڪR=Ut|_yXYWm~\J=hn%Y)##9K \^:hbnq)[.IKCG. }k[uoskh:tPATa(\u[;!2bj&- Z&:vRh 4A"û;qYj)9"U! 18J?-KYbv:7~r gBQ:Hނ+2!pJ v;jP/b{t3g]Ib1zi4w\)cӚj9&XFk((3 Ck՚P)uLA{=1RT}wSOucKl9p\DJ:M43C+*C1:hz] :feTz[nx` øgiy.BvҀp"u#QfY+&bAJ[έ F#ɾeyLہJ=e' %+le+Q ;`~o4 uHeWVy1>]| "2KzqEdwI~o%\O ^qhX>2ī q+sٵٗ)D; ć*ZḐQ$/hFC;vqUۥ;.N2%l9CW|n/%c)֠,@]ns'G;Ug8&]p{_ٿD[xe+˨,#7=ifeþvp+nɨ^s~ɸulL'}$<ř*+)=80̩;n>/d3qѸ7ljuKE 2na8qlex\c( $}~m'Ra6*fD8eML#+6gIFI*%z8syq[Ӎz_ f܃>czXq&z{O)оF5ɒ=Q #QOƓ) c=(0Iwhm; x-_GnQb+z^i.w2͘E.j@VJExZFZ~SUx40;u;!eAKItvj'$FL ن xKS2O%I21S PEP|}']Ah)aoWvg7Np$HM!K4*̜%/HL!f##V;P.B`°+2;J\+ke2*9G`S/% 3pD[WBX!( ׺U!X.ifrFr#W'-ˢ>$d Α+>etw2R1>?u&wDŽMջxg~y{K7τ`,ys=qXI)K *dcNWU?XuN)u8@%ygQedMoU3R"\,.AfQHM.m8L-1*Lϱv:}KPVk:frr5f;lJͮ*^D[}hۮ9k3R;gǼcE,] ~N*TI ?yb!hi[[G̣h1+G9-9QI2 (v#G8@2OP89*S񢞤zt,.]TZ=dkMK6)3TNR^wzs;hwW)m[㧥(dU5!yˮf8iYx !qm#Ww 2(ul=8P&ћl#W67cqG:U֚A<#Ik`۶}3bx.Ɠi䓿dm2<;+l[+ENw@W S1LeM6:>ǮȦdJ+'q$ݰ''%U_+zFt1! K' ZzaY|LYc920nB[q` uvu4&ipQwv|EmF,n'%]x7!t$q=+SZz:Gq1m;CT6iGZ2!T>Eec"okґlBc8B>㲋 s8mW|_=^.W2l=E=|F'Ë4MꮩǛ& JYy;)z>gҝdo/u5|Sz2|?O 7{ܳ);5O'Pף;SHs+zV:Mu{gm=sc/$e)D@sLTLS~؀?-'[;Oy Hhg9owO󽺉%sbfA3o5KaS폿h&m-jQsg?P(:]%p[29'"GJIuӟޫڏ?|sٵG ݣg`f};AJ>J@BC0ĺ\=:4E>y\$_nYWΐM#ϐac5T\%r~2 Z#!9q g;x7|j)NOGGs,ˍi'W-<Lu7ya$VSHI ӝ{t)cRGy=1X{:={yj]WZ&ov +_r /q&7!\1xz_?|&?_pnBC][o7~{c,k$c> #8ɐ"dυ,NNV#yd"g6hrKd?e##y;ojO4s9YǸ>y!فTS__@gO\PfTf2,A1 n<#ɚnbk&B>-_Kxx͚=Wwww^^]\/ӏ@ _./jy{q},z>>0cy7oO9v;o^-sv ?r>w=t8~s2>lտN^7c]exk{gqǓ_槿?{[;Oo? cP1e3h12hAL|:)acb ۑ4OW7ѩABW1 S·c'o cStMMmyM΋?TLܵ:=z{̓ΎKzzNڃzz;>go=k^!AvrJ1z+ ԫtv$ԶGƃNLƌ-j`֛V_ gqIzOW^ i`cM΋FԫGXphQ˻o揻oΖfk̏n=ߡ?}ïazq ӫ ӫwV5az;.~v7OfϝH=!z [y+󆜵?DAJ)!z<8{N>z~ԄU|<5ycG_5?y<ϿC{n=zݣ iĄ筼&Yz9?cϦ4&,+4Cx1q"J @cǂ~>:5/]t;wUHN-WsڞM !9*S cr{yDУ7=wuߣLA=cБzoT[+$m5@)n(Er+:~ܯ[ryn>s= HѾZ_I XZپݯq,,B?l=p;x 7w=v{(:c N^&*N/e*褱ffF/UHGv[;>PHUF޲h H\oçk240[̂*P!߀ kPUc}E@aK:huI0Z9Eւt=.G,I#2BqVl X1:\o癌J=SoߖI,f Fm o+x<]&01)YJ_r P35[ddUګ!2ǀ."7X)L&]2*۹K b#"u{\FRs )$]WϢ̺2LC&c =zѐBmʆ@ٰ[m [VJ&S.6U3VDR BR6Xrn}:,<йLs?=.]foN_ek>CT;I*䰟gP,OXu۴ # 264Z@+3W (HW u.II$c`#;~M5[GvڥYr2sn J7X2 H_.̔Ob`1b |@F4f\`CjuCT5qE is2E 77z 9&p^2кzJAHn.C֙4L`g+O.BX}g JByyh͐Э&KۄNŃF$+"]P^J$(J6ɭ0P?}gK [°`TGJ=$Jb/W7k_%w䡲nl7\?f''~yw٢X [*fQDR d EL2b2ڌ#E] _ҏя[l 3+`R[т&\@ aC~̧2>s4~Z#2-aeɺtʋ %̊!!K|KBM{2j(dk_P=i IdR+i/qaF# *cͷxx i5C4\7C( LbBcVEc}`#,S~|wS;LO{:g~ R̿u]Jg, b,R@)Mn H<(\uBAZnזf )$ IEwm}&V31y@`V`1&AJV,QB,7PLirjmT~ FNz%8ـ F̌"@TE26K/7 CH7u*u`Ud{eCм  ăC KЁN&u`+8.i+nd@ΟcYr> J ?(М7cd$g='Sr^AFb"]HRɛl$к_&8IJ"A/W5cY]Smf^zB= ]W!2hF$ T c=/ص"6m"vCV .-@:"Ja!` l\x qZQ1e!Dh QQ1p -Y.ha0h)vqe>!V^ H.P4oU^)zh~%Y:6Xx7q4aSVey`.R$ŴgFF.83 .wzM TmȯɪeyٶbrAtx.9&ED/DYQXi7˃Ma 6[:%'HչĂ`\ ƃ,즦 M,t B6V⡏\ CS Cu Dn(Rx?ή)0%T~Ek@ ȕoѢIR# UjLL,Z S7ZCY$kUxo\OO'g@-^&}-QAH":B bE[+Q9p1VNi !I]ebA5iA}tz(d6vm,M]ʦ7ُpϥ J~3`w-_oif~rmn/o7W6}O8VcT@|(*Kmm/*3 [|M,D%#"*%Gma )ї (L&C}f\ 6_:h$ u>=~c. Vű$%W+3 Q1۔Q3oâB"")X0)(sE) 씧OhAuCM#\:b${h+hSj=Ym:tuC$iCTumJNRO7J`}SOKqJ*Dv7 .5^RGց9mlm +ZYSq;s׀‘Wi\ZQ5:nkMwX6EHʤ_i?R}gmQZ@^ Tt ޭ6֎qggkBXuNE.v7)\V*baJ6r*}Zݺ.nhn Bt# ֮=MnL}HpnE$E|=h&Dj*H̰l\qj/U象p`*VU\W2 ̩>ސ]@̟@pYV*ZJpAj3JxB ذ@ЅZm%H|n \\1ZɃCpCsOܤQ[vF8V 5' *\q>;d?~s6[~ϥ7_q|gC ; Wq s:+Θu`58C$Vƚ뺮VFbA TH;> |O!rPهT~oE*gst5 A*!)/[ܩ¯9#s2EjH$B+VDe+"BIDY&p:G;ىc #)v}.$Fs{:!Q%ث J T&?V-N1٢ɧEÒM"JtXeMѝEI"(6Y2ݯr*l;|kT@Un!GUT$Y:KFG3Ij<@z7\DtP#Rj u^ƁyG/@:u ,VYBCx7}]g ?]3@Ȳ$VǂZ*h9\yyXcJٗۙx,ʟ=sb۾8{w'k{e8秅OK},~C8ij/.;Ky0v'gϫ 0|ou>! -,%Ⱥږ\oy*J8e>-($!h%akQ[K -Qs$UJVPVD繊ِŖDPe'qɊ] 'rR9/cnGB<|?rI9t֤uh%/vJ6Z_PEBј[[1 *\-ӵ-wVFЅT9{|:bE[u}V1Kt2Y@q. (.x&/WzݫGMkO~ѓ_m7_+׿~w?w?Sh_|&.ݫ>_??}q O_8xW~:XIq|Oǫ//_tݻo޽~~ ?o?}|6Own>y}oo>ong^_po]}}Z|קO_ݼ>z~u~;?SM?8óߟC?)&zͮ 4'Vc@WIUJJqu6?Ty-6`MU`B8P iT!c yޠx ENoYd?,CPBhpؒ CcS℡!t/-x | iY(iLlkfqSrVZM%ũIyTU95L V+_0vD%Od)(1SmH&H((4Կoy8X?kIRQs)ru y͎2I<,%j`. $N Ϝ`7hBFlO6`/!| UTS&k `|*LC+ _+H2LαMrr'œ$fmB%>e- 1з$~C4 ak؄*CSt:.@KZa1._Ǎט‰9)Tu(%W6|` lDD.*&&~ΧkϨ?G <51P,B,ŧg]u&ٽ"(6hDzʨ"F`do2Z&(&H Zi5G)0 N!62; EA,c4}"7>0&1l)6 yPƬ dxkơ_V%La1”7nP ;B-2 5n0ɼrs-?o_6re-Rv17eH4P舂y^P]*0T5R\EV&5݆6Rݚ==Tq~%:#S5e՚0B]21JGsuk塜r)ui_ " (`uMeKDa䇵X].*b[ m[QPH$Z=&ѵXPwi.D!JAHIŸۣ²jxgsšUkURE^7+)}R- >9KU2<<*Z ր:+W\ f ٤2"iL{B[Ej4jX>)z!P4 Ipo#s{t˙X@YT'ڒ]XSe%rG֥R,e t) 'I>\f[1o1F"TJİg&bz9,u^), q8#t:R4h@Q$VW:Akӣ珞?4铧ϟ/S ~=z6I8 k,&?o>|{sOr_>pw7ϔrI y-0f|S\.'XC\ӋOwB>ZͲէ]~Xg͉U zu|ۇ_L^{ { _ofS{bD hN,S(+QrF}Ѧ@um+ƔKeⒾ(x&O%C4EK hg`&SLRCH4p`IGq8h; `\aQA!}&%׽6z 뫨zF+?ŗVK_q:F !ڢ祃Н7Z6|Aw@SIV LX+y/7|P@Y )[xrDQhD%6*`)h͹\Dn`"d,qiBc6v\mT\MDWJHSw<1|"U: H)+h{f <qʘRW_DP ͨ;X~qh+ıkyUU*RbxlU-H)l_oSE>3;z6q=BNV7'fЕ8W&Cd@yNre\CIc.@; \83_@X:Ɖ+A@وu8@P:RelN.R1aky3"h;@n\fZM efb %_$=.5;ŐlT֙itM25TE_,.TJUP䆻m Ebbsc0eBы~[2 ŴEi5х^OGT0]z6Izqay^>]i8c3=fKG>((a8 )Ao Dn[>P>O+(l" C 4.~TId3 Rx 845Ns6ljDb;a jl#D "\.()J}#LkBҲ :l)A'i#Nz: jUmE[i5 v. ,@҃5 AOڑ3EN8y7+v۪,𢞜ppsRH$̕Ĺ gIԕo%"O< l 4[|,XL;ȀD >*Ú xWͼ>I{e4[ 8t*и˕(WV&ZaxlJLJ,Nv"w|`B"k⬹ԐsDJ3QQ댆Dg, P-}< Jw[ *K4{xtQ϶nkǐ@E&v\B>Y -n 5Έh!ВLmeS0ЉQ[Q]e{NA% \e*“-Ն*l*l&1Y6$3q#VâQ˩ĿXrDdmղc(})k du%iRoX`=U?5ڱuG:b:?3-鵴Fdv])I"Fw/ޟFWzѹDO F_ghS':ăeL-01Dɼq'Q+FlCdZC0q:)~=ZV5a7^,ǑB{Bps'Hb*/.=4eɽ q0E$ /lI*W0#es'WsxMٝ ډABS\>ThqdNи6inb:6Gm & tG`KH@c?JD3h ilZ{å(i`gr,.~ww'ʓd%2eׇ{i2 U~lh[>.9pQ(=s[,1PHT#pez OlNsfxc瓠}ٖtZ#xwD;Ȳ2q掭\mlMN-A9%ofVe q Bi;3G,[. Q-'$/SFhjׁ*NH %nrh[[h yzJ;whՑ(Se*I]T`X&at/ rx.LZmaPxf" /O &(X]+j6h^%#~w/LYFRlYܽPȢ !99 N7e_lj03 ER?쟚002J4DNЉ+WJjDxB0A4?7.#6.l xqm Cy=gK~ 1@6-{Atцk6YOhODNZ}#S*w\j/Ag )8}b6"FZ+8@JY*- ~H>@*GP \R:Hj$px1)+Ek)oD24>L!U1a8 %c&OTԎjzN|ΖCJ's:cTHfRl_[婧%Vvfo &&o+b dV uZ)GU콇ĉhK橽kv3ejFC$ڻsoEYe\*4`%'ڏe&Yj'NEpxMF+l`tԚzѧN06NT\k!~!/Lhyj7#vcFHn5cm~4dn틜lv(8I%@mV`(&01R<:;NkrY<.NSMNK{$dYR?l8*.2| t&"ڎMHh8B x(eN*$w}n4 Ȑfc$6iy08 [;u'C mCҾUzuUbD,ǥE8Y$QJ5]42:A76 SeJadL,v`ۼ66<؉?k*GYr`o;K| &I.a=}7[g7Lnww-8uXSM@I1"}Qc# w{)+<D`%7鞙09l[b`c<lAиMO;d6"X~oGe\!m-@$7Z@0FYr9dyɍF{脭2Hn4Q6e<=ʸywV@cpV2Ca/ ,&6Kl Æcn^8Z4JldV`){Xɜf&6r5KVEtf9Ѽ = Qq  ^ J5B%(&x ĤPP]#dgՋ ;'6oOl /UuM!шU.987f~z m+І.$6ƴ,c9ѪVî As]JK4asMR8]s~)2!Ѹnr$fVEs[>1p(vXs9.'5ȹ$(:ArRc({K{I ۓH\ '5 Qtä54Ԡ]xgV]LjlIAnGT1)IL X|fRcoBU*g2oOj4( Zh u(0ڀ7Jl5]A9M%|Qu\b]'5%{%uQDe`m[QGU٥ .e$49m /LJ3?o$4 A&&iBT#?SJ̄QBc0? $t5x6h4vLY'f3whʁ\h4Up'R,f4ԡh3f4M,(' d2,J@>;T:ϖ؉7#R+ӛNe%hbVĄz5(8IЋ 䬔ti$t4*ۘ2*L9PIL&So4Ǭ:k}P%tUӞaFh 2 5 3ZBTyFK3ň }۴ئ839!`lJ AEk˺Zla \"$&R|rSv *F;#[i`3r:0..cLbFt-*PZݦNepֳ5£XK,vH֥g`ם`!v jBkmps1VTp_'h$y2ػ2U"DUGx0L*ilcnkSYJCa0 2]Ybʔ]Q1PdorB7vx3b|SC57bԲK KE|DRKLYhnU)@uDl kR Yd6gS9N& Y0RM?9lJx.C@ pOV` p ff-:"'>'&GL֔Rnt`=))&M)ɦLT[%UvgvN]tT`ѐ@Bj8xR4":GK(P7HC$?O&V>hW,R(hUn=eTotEcX"q:QkU>e:C.HߝEV!2ENnD\IM@Z"b9tb0myLSlބw lXN-xAk_[!m +C2QR E^v%snmH HAf4L~×2TΉO:bݦM21a ?7ЮҧE@j@F,&J.b=o`AG%&SLPu fIwxhr6B Y zUn$2x'0$dn!j듽\: aG5>eeMDp2 \/-`Ήl@c"lZNʦ})FˡBl2P5R␉tLBX f\yU͚oqN{dj@5ʹȆ@,5i  P 4Ab!2nWO_muV. tyXSJ`f0ϥ's24Z VZ[f(")0pp"t޸WjTAH0냜cyl\Hx-2 }$ݢR%TTE3 ŤPE}U FդmscY`{Hq4NJUzniY#mYZ$<xWIX hbʵ62- @Y8Sŋ+%"rBp6턮*q9]-xh9fty;e˧ ?~hċ_n<_JL}<2wfW^aP_֚[`iI]>tYFb`Rk3=#s\cMEиU Bm_ ;o}ͩ 7RmcKQ"R9V;xﰔiLB](ԾX-ujM-w^$.T7ZEҍ8 `: M Kg񚝆| L zq>2e\IU6:V5%x)sGaϒY}%ϙp|I;C{JԺss>)ԇ}]K^= b>m&NEރ ȏ '=3n߀`L#<ƨQ3rf f_ Ê3f0v^E31F19H2E@l3&,om3S6ƃCQO$jơ5s~smFbvWJZ[2"E$Kz zp̀]'#Uu2CaNЭ-z^REzd62hKEb.=&Y分l~QcrN &ܴv;g(zi=8js;mJP7|cLq,MF@|, 3%'}M+E\0 gA uz3U.*gYc|$oYڌ :|sǗoo~SI|o_<~eOUf &m|?y)>c!?VnCЃ}({q?74ų/^<՟9犂o`h1Ow+"Ww=>G?k[BaV:ٸ‰It aCM^`ѣthFJ:֤],: ,{l;9ɹ] !TnC[Ti5_rTt!%,=HTf+PkfWCȴ*m+a:r$1qSM@x7pXt5DW6/*j~Wt!sD !4 X,WЛjl D{- ȋ uwS5kmc7vJ~X&xa 5rӐy*" ̟B)@T`(R'P3"U Ph<[[Cwkk]O. ӆS)^-|<ur2) %g>A4,vc,1 pB Oǥ\G|# j1} $vN@y|P GK-iB՗n;֛tMLh a=CIerp+?lGM褓 98{v9|r=U.A Z=.̲Rn9O>[(JD, pش_0W5ong^_pwJ,tKvwa79Ūő[;*Wm7s]s%oPu[}n7 nk:| @iYҬ4L'5V Ҁ-IM1ۜ =ŏ*IEQB5>'>!QXG8H1AP4TTI*ԥɠ2j=gkox_y(PB .# [ m6d!ŴMAΝfz0<;+qRZx],8#9αoԨPrH}y"꺙_},Pj[=Ss}yQ hЍ ni[(h+C^|0ҤxX85~dKCb[HLFÖ0 |Q_Z|j*7YmI jg5jІ7li- {g MwI]Aӛ~Ů?N\lt)UyNi]dR#dkq)0B'9]9Ak&P# [7T*So'=*en4J3\ luvc:kиU2 o:fjz6fbSMNkY>@'l H[f{Iyƹn~E@60]W0^]_MmBpewF.dmh^6Ap틿#q;pݽ.6>n zHuS=뇒p 𠑣7 /7`|5t*r}Yl)= ]ۂթk?0 to -ncY~]\^m\K9TPk)pÙ&w-͘l˛ ;QRI0MWJA?:=zěR0e3(O'@^7~y"$QdNyŶiRǿy/?,ތ/$g k=%p߯-FAyYdO&4 Gi0+9.Mutqy2Hϧj,P@i2<h$aMMH I|'*M4QNJ"._ ^&t/_p^s zoHF..!٦PZw=~x+T]J,i TlNh 9[t@LAV3eȲaVx%_H#9a_؄H[[M-=š+h\%ڛJPRVY8ʒ Jb KE 6a 5bkLE-ZaIBLlYH`a7A67:i^zMe]|vLD F# *{7B[UzeSE`eCdNقf|ȈrDOɕcƕEZh,Cwik0wSR]tbs^0(%t^tAZѶM|c<.盤pʞZdbմimE)FWX, _*]e B,"aLptT`HTQEVJ=ɤWXƲZz+PKTm| u-k Y|"s^/XaU,ijCKS_aOK^_bKyqSV!|~uҢ2AX˜AUg]ޭ*f3;K&-z"iE{BU\ܦRTS 2>.t~FNlr~+o$\b6WNe&XOұZIdeDݣuaMz iE.*>T!u˩EM0Yyϒtgت5TF KKH+Can`,_K"LͫKO Ul Fm\:xoK9Zy>Z=5t|=t\NO0GoiZ .=NǛx*~M!Ooҳ>u~aW>*YږlCjOwWn a^OpH>E^K\iNҦ4GZL`>ظ z;X߼5>ذnke#vܤmOGn;mmٸpSA9^z~^]CiӾv?RٸxyeӲ->.NE CE"NoӇ_i1ɵ`^y݉KOla }DwbZN$ʠ/=5\Ԥ Z1@oC!p.PU/ #&1GD!dZ;o W$g`,gTd FGMu$6g ţ >YNׯrb"-<r\^/_xJ]Uٰxus}|sse?\x!_\8Vۛ)el3.r{t}?7޼{~:뻏97\Տ{so>;ugg<~o7wWoަ >yx/__^ի8^*՗߫_~@.̎L,HFWRJXZlX<Ȉ|au t x(Ҫ.=ngRG|4ljZ?NaILN|x*Vf =x[&e$In#a,T,.JU:^jG5Už1+yFD䠖gUN], \N{2\=> >J>dXzHcptϘ;TXדUv2_+^+EhRoK2h0(nU".6[X@U0RuRnbTDY Y I:Ld#cH"Icb Q+iF#k "ƑLSv>J@O/N9TwA"Xm6`@U$"J[18GZVvxעCÊԳ ! Q>Ը j"'kh]MaV)yLJpx|VWyuYB+y#y%9BT ě"oS"= *R k#eq2wISsvњ݂%z^aW9D'iI=o*/̮/]ÍPB#qJ@"SȗLmM9_g3O=̖q#ȲДkP3"')L0S$ O{,ȑ$|N we( hM~'UU5gTgGk ˢ$,vv[" bdGaz{[!x2k0,韤*֒ 'P.jFRLL` vf{r_HD>jXB9ˏE'$ ,6KdK#n]"Gtv/:s RUݧ+eI;%RI$5-%_7d5lS&YL1L+n͙G\mW?\ۇw?]]}s6ȷWwO*ۨZ#Fz1"Mv<%UtrOfp5CIdIZ ݲgد(,hut$ _~l)|'u_f>NQlnK%6MJռ;Fds/Ƕh9H1Lu͜=hMZ6ѡM7TOWwU&\yC[t\ Q$֯7%>ld Q=1͞)ړdGvBtW_,0~H ) fܖ›Ry8Ebk!~}ڄ AivRaAéjכU>qwg2zmzᨣ]}(rpC[=1LmtO,i].-1DDjh88KO׳mr-9Zk0R=B k{zmǦ]/UzKn.hUC7ekZ.H -\;dG]ms>iܺ mAͺX&ݶrT\x {qTz>OQ.B\R^}SAĬ$J'኶)q 1l{ju>OY'w@ߒY٥@#dRLs-V{eUI_d9'zbh- ,w."{mckRvWޖ-|E%+[QmZFFi Brɾ&Zi.<%m龈N~`]}L[ѷg(u`ktIꟂX[IԲkIPOΝ0K$'ӧ\N 6s"GUrvu]s9uڬ^Ǿ(aߞe7T&S=todž`qJZZ]`8c0]^tQ[z$W7ǝZGVdEE:n>;(zeW)^,eahUnUMqeXJ5=b;[<1jW%͆4k;; UjhݩJ]:KbƯ`+w;J5,Vjpj<;΀#ocdPSfh)( }˲wj ""d˅3anXCWj=Eܢ?V(_L}"?5AS ʰ,+ʯ#BUP`>S#M]fU GaE1/*p&1;v2I[ZX1Hl3?`63ܶJ`[`ď wy)oj _ ώ$j;%J"Zx)O`РW.gaKI.k%kԡ] mL".47K+O๒㐩ÌTY9"뾹;C7coUۤsujxr?rKu6㬳Vۋ/^퍲}3%_O/sZw~^{w7o>||6M?@cKw'X`fˇ8s#6(7uB~3PG5DlEN&Jz/97y(j &)Lškܩ3XQQ0ET(6&❰odZ#±ʤW).+   X9PLb4jd4C F#^P3\#R1j`{ tҶ0!ANfV]Z:LxB.,j?T[,L#Zz[=EP+aԫG,Z!^IP{T d4U+Z}悉'†ajzRJXaX 3dĠ4tSkeٴϏ"zy|VR =r~PU\!H N d*"d[;E|n:CMVL,qpUm(PӢpәn6ͨ-f#Yˮ9V VƐjd?: <ՠ'8 =u8i;RiZ򊢈 Ve>`2$?j 5^=d5>Od Q:TpmygM QDrT.R I ҳ&2L2s:A˖R;Fe9W dRvg3=ē=v>')㼄q6㌳dWϔ^!@_gZO”NY⟯~~˟w׷?StgKM$3wt\~|eO٩- 4ίlv32/,+]KJ^uZ.%zj43hB^Ý:&܉\%m7 3Wmk,*!rw׷ț%NZa#Kai'0V NÞ#Y $-')ܳYHn MVWO6t!9 %}mWHJ j)"cœObm*%+hvdz$M43)-fTM4UQ&lmt+7Բ1^sz(@%@B; xg|!s?ֈI+iMwZEIե.QFN=R;l$d^Nx1A7[Opɍ $-2t"΄!Y312FytFEHg_ў,ɲ8RɌpW]$`@N kVv3J )AZ:y[jN<>Њ 6eK+rGR9<;H&X'2 q &C8Hfdo#36^ &GV hab23aoq`` X[q0i ?#ILvSF{> 0o1Ua ZEYV̭\;T"(.qGd :eQ$l%^؛P"6=bMOٓU1J9ϝ $J׾dLW[f,!r4') XanRp -U1kKPYhP*RRe Чt>딀՟'6?r":> >ݕ6?߼sѿw3'>K~a&[R"z8liffqy-v>7c86?S|8f vA7Qݨcg榁o0ĺqb``81Tnt4ndiTdf7 4Zepf;MVl4ǜ6KS]a~Hj`5˃9'<{O|Zԏ]j; )э+b >wGe`""mL7NH%}NM$xK{߆3 ffO;%nq^gk"~4hhur UM7uvd E @'&m( 7xuqm @ڶlp=x}+0M_Ϋ}9Lj-^Xx%R_YN.(=yF00殙-dbL95XA{bz(){p.6ߧiwPûr2 T 9u\St%qjy?[5=azlm!F6ŘYS '+uokdN l[q}ճegzYa ?eX/7s7'Ƿ6KIoÇRk AT % |K "kngŞ8M s K!V 5o["~>]աbG?UҘS N Б:uvhZ'|z"mAP#s'j EA ĕ[ERA饐Z,n2R`"8O *TltR@i#!Of "&f_ P@lI*jБݮфPKPEGkDrlVbirmB+\e B<o+d;Lm'Ef낮V`Odk@q-Gxc9$q oN|j,Z*;X5m&,uh}6ÓdКZ$h,0ڗ$춑mMVF@=:@wSDHA^*U4?#Yx[z 2j־]$P޹9/ ``PnZBaⅤ!܀YVp?$DۄPTt 7li =ӵFdX 4B3Z3"-CiܽӓzHd}QSre N*[mF#, S*H=VS}QG$t8bdAD)04˱V2cKqFzhi5.g!R+Q~8E T %uk5pM0peXՄy"81  -yZۜw0dZBfЬBrUm:N&7gTtm-zh:i9DWL`pwH(nfK [iCPD:XN}FYfЊՠ :Zva:upzwꦛRVmW?\ۇw?]]}o>m\ܸy{$C9<ֳp]Y6߂MN^ W1ja gPH3$2(i {EjˎV/ns3X]d9]QeW(۸b ĭI(Laht]E{* GTG8 Xp+bQu,n"|-j ^9-`|r8#t nǁrzέ]ZgS,UҡUs\ /K<p`6aAĨ-,L-X^|P:K $&0V6`%! q PS֗epO>sOLqNdj SS[@ fp'cr |7O w`sULcH!S׬ի}z&rجr&֕L+?w:_<@j oW:X}TkzҸfQo0 ʞdU=]B٣T^*.aqW:!R|q''˕2)0oаu9(!veDžnSKzz1ӫ(<_#˴u|ж 㻖z[\"w>%=\]>9UpW#)-e h/>.;-}@( >}漉KPɚtC$#[\ t}%ҙ$Lb _*P֠ܰ6pb V+\b5Jxfһ0 #.!T𡒪ݤ|n|]b C Ed$vh۬HG^1 o4^B9g2?p;2D:gP^iN笊0)q"kvT1<%]rr" >T k\4K!N0o@ z d*(OU7x' ֥!Xz։J ,HVʹ$\@*ު>&Q+7wGc]dR.ڊr!-q=EEbU,odmPUH&nݤDx`K6ޚQO&LRWCtʄb[=iebpqôVW'8eUS9ڻJ:YQP~CPF.}kSI)j>]Օ߬'Rd,g&dR'dSi0+" - DҴj *(ZHÁ](ù:ħgT$vC|/_}He fytO׿+-ė~%Nzz~sp/^po|e/}{+/>{||^ݫ:%_^_nٸ2Q]OO/{Mz~'?ُW>ܽ{ȷ>H?=xmzw_>C|*O/o_~/^߾z?2=/ɳė_/~~_~}gtMOt';=駿_w97?ѹ# 驵 6p$0 RkMWrG&ϞS+[+KԑYj+@UmW,v l,ۤ URH d^ҁ6,U+i5HJB>((\nddh9yb0r3i]rIH$Y~`v) 8a %AX`%-=̕1GƋ$F$b+kڐﱍ=B2BЃ 5WF J, eC&k rʚfUarbdxݣxjKDspWqE6>N чt"LV<0(fII&e^@'b\aT"&T*-R߹mf4Yf%o0!*'ٸ nQ)`P^r!XtL$>XZ+DK/QER1h5zRr ( C GV{O1dHGb@]OqK enp* 2 Y6/o1Ej 8ðbcm0e+z"XT`Vf]t f0>S u2-1ٺaJa[TVc)7f7gMg ̮^oW+#j> S<:8QbnτJiNcaHHXyu4if*ż5HSCAVOcV$7؇IqH,!TcRny/&1Jg .@Gvg1H%YY85I\jhD^ .%+N8-2PzH.ڕ!7Q <0SX mJԁhUrJ5\-ĒdwjN_L26ɰZW,8 I0v.cfJ;<\`)%l3GƧ>o|UA^ͣk|V)Eo,4?_xoP2kbfdlڌ|G>E@1 `>  er3[jP}AIb|Dl9J'Z Ԇ!3-Q8ǒE{KPk|\y!Z q΁`14g0 [V<}`K(٬ Ae5L S<]d nȹdN-.Kl= I%T`-RU4R7y!w$ܒLnI@%W?dXQ8 6k9]i fz{2fqA* JarеZ0w0I ͮ`kr7\دp+nskKbi>jn%eVp/$h )  I*R@\[cRRY V~ChXVuɆW xjXͩ{\'6f4uQƢ1FP#g,&l{e&ysu84>j9~xsp 3 GۗWnKkª}Qt$,7 ?j~ mT-֨W/[(d}A!d ȡPEgko*d_RpQ15y>I6ɵЬoA}!rng㺪XWcDii/fS8lO~V9W׏?|lJڊor6#eW~{C?&91 Gd5 x=}#̊He3HV]yh99VPeS+gs"t̲"J `y-5fQY=aRX44Si6ǗmqWVsLbDM9Ba*0$ ϱ Sef{&g<g.rwd1uFF2]UHGlǑ錕9:3,]T$;ɡjIMLbG/ݨ/TwԀDĭuX58f) Կ-#sM)[G_h/|/FʪMS{V7f3f6B&9q8GOqd3rixSm80{}5shj)O“a4%zdlK 5^lBBH8$yn36 1S;u l"aȎ Y]I퐵qh,ANv6lX)(P;4Rdq|َmn줷[)08O.r35&9w`怹XtF6ǖWy5ǞhlLr=9`mZd`;|L!f1,Us360Gtz GL+Ul O}fLgq &L)Jz17%`u|f8ZCNdž^h%АT+Jfs{e*\#=&zE)9I"`qi-/S1Iկt Hc[=`QYGXgt9-MH Q(ƑP^Z2NݼګDf;ٜ*TlHK%kވ)/KB}O1ϋW( f%2N0/vB׿I-XF3~`7; {߽"z/y~S8)`SwִG-$vXC ku~NA,Zbuߦ><"{n`[范A tZN1^UTlYW2(54 6AFU&EѥZO_SHIp)jˀd-jqʬZߨ⨴AR|BmcCTnZ+[^(7/%Z=έNmη]%[VbCvCtM{uVaEAp'hUnSlai˚ )kHoɱ#{@\ʔeTuq9~.5̛"צ f>;&,W4u n/qcYD;˲f$NlYi$v {6c- m}ncLɄ4y"ͱy_վ4{ter3dmo0GT ]wv [qhyy #6-k Z|hAoll^wvAEǟьؘ8maJl!u2#]-*A@b#)oJmni D9,WNV!@]AvZR nr(zݮo& .rfɄsw*]׉GĽC>yB_VzmA8vPAzaO5?]6bDՃNPynik$.BMqF)fn>I1Ks/*э/MoBSLmsy6BCN`jnKeAg?A؋<"tD +!835_v Yf0UPc!Brw%4ة4HcMB|CMCj"7@9u߃56,eclЬYeJځ ۸\ )TVwdA~Zg:E}Oh>B! -uC93QF%?gް7:/|^M*F^7Gs)˃O?#&Ѓj V_5ǶV d!rUu2j=PIKc!=8k瀋zT?(ӭ(K۳6,.׽L{VA'ΡiDk=5׎ͱeqW֮;ZVl񺿕#N^VYn1دIDߦV[}?~=I\gj6x):;ILoR!! N3trqau*t6`C:4!G E₏{1y4BAqG: *0->=лq/g72`Ծ7$㴹^zx̀3L%C%}(s3 z l#l4KƮ$ya"a`ls=%79z/sUYZq|l*/y!m^#quluKqk6 i? rc/<MyҴpBIBm}nkgaFq59!oGջ0ZjV6pk/r֬=7 q$ZK%V0nVL`N$LȊQ\qz\FۣIhG-u$S a2yN$˜sd$eYő8X"pMݝ[8 jW4HU=L}+2- M-Q{yGWJ2㫞̊䄈D.,]cJ%< -V79qQ4Ȁmٙ:hCsS'7@\&ٓrvdDׄLxf f C K ]b5:&b΃S1mܶ*C+T#<^f`Ώr8>337ggLyj@W.VIP(y|Y$u.+Oo2>"*+Bw0Taejޤ 6F5̍:<6䓃Ķ` th!!ѣ0@̀]?A-h'Qd o/kq."nǒb )A΅M΅!2\JX$ q EW#?FILri6C`)2tJ-rTl]˖w 0,V >6MB|Ta7_YY"2Z;qC(90h!hn>Hr`Vo;C\ShH"= jOa%? ,z@:X+5}oN R77 GCoO^#x0YtF9C(=~MS#˚LDLa91BHIҊ:jwJd>@%xO+i 4~̡TW=V{a[Y?ҷ3Wؙ-.{rZf'-C6u 6YY׭KӐ5f9KFm;Jy BG%we ൞&h-Q,Yв!рbh $Hׅ,!4Du4V B5 yt\ܣO+}\tnqZz\10 [̖k6n \jeUIp6Է‹ tǘfO3>i&T2nD+#5g hQĘ32&dmgzm8FxTZy=6įZqx=j 3%0'esܬɤCf y<2ar$)>ahUC`Lemtb֑U Z9.%%<ժ#,<\ǩӔLfKEm"QtcnogvbNO nG*рu YZ<*o̱[-;H+;oGReQD^: 6oRB^c (KzVɖl|=yYv+aȲo>Ga>qA I3qV6 +7+t" ?;ln;A dzVnPE@(Iv!XjE@}Ecv䗩DpɯFz 9BNmg~ @0@7Ѕ0l6% J@;|д9&m[Jk΋;V/2,˴5P u&>365QEU!o#8 T޹I!'M$aCyiA#B}&l]ڽo< l- &- Jw(:ѡs<+ u(A0<+*[X>1yM%!aMQ]s&m=Lg&wQwLjÀks:J!C̙,?R!:*9qO9xE2!!'h!o?7o]Itu}uO?]]|_>~n~{|}wo?=O߼˧h7i>}zx{㧧?>ӻ"n*~y_pZy BI_?}o{O׷?|=>}-Ƨ/wovz)7OϹw?7;իox?՟??ox6Ӛ`m+A-O΁-,]C yZ'VЅ.ДHvNuh^W{`V_czn2L=]*k0Opu2TX> 9<*:ZWM|a|[o+-`F YBVs8زAzD{褅d/~` %‚ r3 F9.xU~>;s||o4BX,ƛӸ'X#y~g~uUV<7EɊh.i, }CR@-A'U› 6Dq/Q)Q-qR鵵Yl[ c0Ca(I1ؿpraZٳA'p<5ѫ͂"u )ȣP7oߐ GVi 'i`h]"+'ezU+ԮP#Ut&>^h>P+ yG  sl C<#<%,r iJ23mAxN猊G oS>ͬ< #' )F |(1YXHPfB:dXa.e1ڼA% ;ƈy*p@(-j1Ve,T@NeGÔ(fd1ˍnErV7E =k[h=E)x;becbvNS`Na4/SWM+-Z,=V+Bhh'y#F8Hz17[0XVtx tyLe9ZъFߏgNϺ\(!]ʯ In]Ijr'-APK7Sxǫ> (f$Ih6%C>}Ɠ>i*iI6q>Di3d DOfsۧ)ibMx8fi2Az1<HIGSzHb:܄|OؘR mRG(%)JiCm*kjrޚ.:CYbr5B1dM4;[H[!i!`cŠl. _,,h(I<1mCLfmEhΐTsrt9tt7/hIf" ELo T$%j\5 ){]UGY`LDmՉ1oQ|+Nܲh Jhm<@*dk($' 4Oh ǞGR& 2&SEDŋDlŋFBq5Ko%(:#o&ۉ%#V iVmyzM.@>Z4!뇿>_!"^}}_O𻘂.?mן; Kq딋~{)YO9nV٭%FPL?z/PDcWã ge53A&vTɆp?Ay%\o 2JaJuڽŕk F07Uw eu"6"JH9W-p(&1_va5 j&^L;Ra Vx\7ީWDK,X_V%ЎT^P׫%d۽t}T| !٭V~5^gz4{)5$gJzh+E R gDHF 4jK\lrHDzģrj $'ssKLbg'NX=f o u~:ZtP3^nDf1iOc!D/}2{ѭ^鬿vTiK`m3SDd RqKͳHq?aAB/+3hc}G-I^0d ٯQ:i f _ZPGk_ݒn/|7hd\C_䪗(";[D޵ %{ p˃6Xh]Dd!-y"UPU;`@+43w]J=Ub^pd66HbuMj#\وUՐPUFvDSlEK@OQn;X*‘9;A=с8zW*z_4m݋ lh yuyEԥ=Åvضk=]ȗeUlllB1,C%[,ze˖(z n7-gu՜Xaʋ#Rڮ a$"\l<ѱgo8NL(z5 [aui]k 2쎆r㔴HHBZN nF̐c$o`J{QtdPq=UPi`)Ji ,5 `N]5SYdþ0df{5Un K+ 2S*;!1Om.,' 7pR/09|iDtyZIe'ꣵ0>Y>kRtYZ]m%" ^p:,ap0tVLMMYs힓ؘ 0n:2Isi-lu2uT.r"yKJ)‘}D$WYdQ:!]/K`-25n*=:L^>u'"4uj}|DjZ%RLMLeITZ ]e EvAa=5Ѫ,*PHڃ$l))kOr(A ^,!yb QBn)ت+fEQ.šyIfwvش7Uf`69.]P)+&}.~`…z;<ģl[ *!';,/C X~|ugg*7VIǶ`b5"Grɋ= vnr92*`.X)bAԊY9冧TDH@L`Y0E*?i8\^]]ı;9o掯f@m%}x[G$ZʒZp!2HZRWoT8Z5Aej[\#+ hq]S~&Gh(42iV}cè3'Y`P_AӥDOӆ]`pT%(`k+C12z_=4lVuzIjp!e;D| ]kj\mrw%| \6t5fM,fIfHM5[ -9z|Wե*d`2RZall(2 Atۅh ̨ О=,``.%xpރֆ zHE:m:" l ZadP̚by {o 8W`SmL-&0ynpgo[LdjT%n%!4)P JqGLϭGwMzv d\jxML*Qa5;g_w v۴䠫'q! hsUvPhe{Ѡ>2 YB5!BV%nf%B+y:g(tHu,@bʩO럵'R XEGm˨-fOX!eVxyhVum[FwU  Cy59;V*vwiݩ vgh]MhZsBVo3OvY5IٿeVH8Bs/ӁK>JxS>UPe6$=Zٖ] a;Ii;Dm URKԃ4m-=ӯVO`0?% ,F*7ӱn@|XmBQtRj{c~i`_ KF3Bcԉ\ܜM5Z|#0!CwM]؉m oرU3V=_D@TlնڞLurjMh[Q=e=+s8)%!{7ch4BXu6#4T}/[&,lnQG(쵛(M8n:kR绳ql Ѿ4]p8T(֘p2][Vho[ J` :?eD ߣU3B)Fvg (oc%#z7N:b뛧_"~xdVy9%\.۟>]Zǻ<0\>le@O3ܑPe=]eTUg`2wMXfܵ8A0YPi~z:a88YI{:&z ۾AFyXy؅=UtQ/l綀Bf@&)hHL؛B&Wm9R CIU9Cj%%]hlj*2y>+j1L쳚G Ayi-7#`֜hC3zq f|~;L>80-| ~i s gX_ߤ3.7=LJ͛|~Fl MH*Y b6jU-d ʹVyi50/;:39a绣yɫ?iu\2b/i%5f50_L'񲚵9әRٝ`_ F7A} UTnwT VkhpA'6hLh]fFW+"Ycҵ(t_%nVGFg`Qw <H-#ט\ ęҼTވ} a.9U(tՇ})m곪Ж"a4A.#^ܠ<g3=&V 4jҺZդ;C_>k[pFMpF ֢p]\|*8e_\I n hV;+]On)7Wj" 2,.dvNߩʞ{6lBwx 4wi4ڜPY `NϨ-I€L]QICb rVQO7MM $fM]-_1Yj3_Fȕcް z{ FUhƩxF^n640Hb{/۫bܾoMa7nIFБ@z\ÿ6,1֊R{3~S yf ċ# 5S{Ja.BC0}Y\Ǒ}/eMQ/̙y$xɖE$큀멬HZKV!ϒK,_)~s,1g2U|!s9DµgV i |kiҝS}>q~ OGƧpp_p> aCk:ESx}:}7 Q/#Sy4&w7 V#_sJ9x9e8ܗƊc0z}5Opqͣ p {b{-𻦼/]w}( ;gp|y4Y&,hq0<͇:<$1x>tSaYbGiHB^gmy_jF#0# ]x٭Ouk6 ׉>>W!o +.l>UDCHKhߵ8>o>_QtEo\?32C˂ .+$pܑQcQH`v'n/Kb7/^}Ƈ`8}=߿x+i~IJ ~?x݋p??~ۗO%?޽6؇O^O/_?yI=:(7/yCGZ~q摔<<ë~'|'}wo߾|fݧp)}/uûS^6s^}w~‹_~_IǻO_<{~~&ߝv?}N~_Р5hD;$kCR?1M7s=yJGD> TN7(~)vQ$)ԢQz4tqX/#Ed=;EkCb1>9o@O}wuEkN "n;i_'QE]_gA2X+標$e]9/f F\vu@l6DUYturT OJ,LgrށqV<(@qQU4qViu0BۀAGCq|Mep(tVB H{4.E) \;9ѦYZ*LWYw5]lb5> nS8æ xGϋ,4jCdDV.,QNY\X pZ$Q2 Xqq '#".>+4v\ FPn ^"^Kt}+[Oty㯿O8W^r( |KhϛXkB#aF Xk?x7)B4ԎdŶ&;T Dp\CϢ#\- C.FKRE! Õ1X哔.RB+RChEŀw=U9^؊[V[><ʳ7?˨!ڷ__<<~/޾`x9飴 /M.FG9 8Q 5=y3`*kMՋ6  %{S$k"y$=u-z3fbStFBP#Au؈I3{m'{-3,=.28ߥ[EuuW';n@.zۮCâvvw`9c07PhsT6< {G`_Y^pJ&iC( &Y\SG*]SW*"l^t_7n0*Fn498s) zP-sBiX0R>aiB $5I7ɗH5 K,ҙ(y+Qq$C]lNܽp_L6\A}Cȷ.XJ~eDvWl1T52&RO038Ecfto]ݾ{]V쯦 ls< v0I,ittEEY5d0Tx$z t5ƒo,w2B-"{߫ዕP_ #̀,&;I3m?TČlcKOdzzt:_gX8ˤ둦'YMWZ[p*S]Wh=߃E܉5|p7hߕh䋌rTn&r>}) $Ÿ5P=p ʎCE5B E!+vfɝ(4U6S[׳x(P*;ىMu>]FEQ)cǚc c n0%D3 EY$0s.aU7J 4J{S]GA)9~? fD%a:^b=v &wϞ%>@l}yɳ't*qOw^wo?to?}~L/i_":_ג.//~{rQrߤQY<" }![M&)N @Ab6w◓I`~i?5PnoJ"vH|n/V,ep7vN"j P7I4sKW q8EȈLbl%FS[tm&GL4s|4DiBSJtb49K mw ":n@z:rb*v\cUrMt >29JO Ijg0O: *bIG=Eq34R#iDiv+q?l# m*EE w$&."B:œ J{)ziSH3,wFb>+'exz4 K~MpK # * 5甫emBhO OJ( [FU4M"_XfE0NSlGؒEcakU@'4J5Ŧ08aN F Kil̬؞Y`"rg&b4d %:AtɥZpH)C6a2VK`iXz#L+] &-\x ;$N)z21d jT C׼pu}EYB:%ݾ`N(_@ۻ˃29Vn*PAoUyKf;)]UEPWƅ*IHmF,hxD}w$R[o:+[(ܻP*B2BYl5qyΒ!˰B(/:lVE Őѽ bAvDn`]\T)̚:c WW{pkꀘDA1b3rNfk3ړxr(m!n IޠAY@d)b]p)`+G=LvTݝ3x0+Y ,Qɹ"/{ 75AKR);{,څe; 13 !Mc?9Ib|k 77CUUtQbm6Fd`ޢ%)xA6:DvL1@g\p!ENsS:4SX;t"ug*4fX)imP%>]f>yrD@E+i} LFD6u֣7!.o@5(^RGH`%VVeAfQJ(,]YN9J]p$<~LYĎ,m ب\DqT#- @[e>#,jB gS2'.Y%Iki7SuN5 yc48F..4効e{$HMH?Gs2 zČL&ieslUIS{X*|AY>CRȈf7}̹!S)JeMTw^WyT #MPzGtBaF1\*>!W|B OшGlAN!'p6JxCGfunBE8:ZKd d˪BlnӒ7uMNg*7ugH;tn(;+Sg7L13MLYbAt]YN4{3܋{HT"p$[TTtҪi +k)GNV_&hFPE/y}S}(; luc^ȖFjdצfVN22JA7Dɟ?|?k_|C"!*p(?N>=WF ĿU(x-N?8g&,pfh De?YҎɊE8Yeg*p]c*|ȥLh}zWmn`xdK+zD[Z(˂M,V! ;փ OR6%Ar$ ;&YJ?U[ Z->v1@g)iw'„n&-$U$ ifCxrrq_|׍sREŠ՞+U?f alי/.\2)^&]t8t.&f|*{V:uUgzҌJ*JLfVc`RԘE]`_4{zOyJlV\Md^.I/;Pˮ%:1Ep,\bp,Z^Fj^E}^j˕nW\q{FnovO@8TpQ 1lp z}gQjU+`JA& 7V dW̾ݷWg 'EknftucD:.;-Vє'eW wu bE) y0]8 $T RzVu1vDzbk xpߎ(-_O:#_Nr m&UaVG3 b4/&-pV2O]o/xczHU%{*%WciR=3sH,x-djYRXϚR86Itޜ}TG8䆊5cE'd"j-AC;x-g >KY[Fu;u]<&:$4 yBP6NQ˸'yJ%IE8 f"PŤˬ ザdv]6hxڤ_O+NѾ)MVfcu`Z߶֌fh͘[*$޼[--$?T4ᖘqiaY[`Q@huU1ټ n7U.?;yu("Gu@勺>JZ 4VzJ8Hv(.-^+H-2(ޢs%e%o1>[~AZ>?z䍩??RX+Ԃu?ݽ.yrWP-+x"3z ~׈ӝ,NQp8a#EnTvYՂݜP_Нkf>r@NH.N(Cb&rJ!REJF& E':Qu}A-\W.)/t.(;㐪ֹ d(CZ b=`]ϻ@)ʮŜet$ZcT!DS?̏8EKáq[xFT/{5J} d5x҈)N9QA)WJմXpT(T-chXz"WGTRM1ZZi}E: iAw`NNQaCtLjۍ(JPw|AwV֜MuKT#T0# D5A\_ikk8&WI/fyCڑB{-*KK Y)V7]f }:99kn/ ¹)(^Nvݬ. Ublm!^FM]ҝ ,Oun`}pI,jl0uͺ 1UZVٝ't̻ep| $zߜJ;OF+_@NtJs #>`Q,),@hSJ{cZwԽX%:1eo9+RrvL;w M(bO0;$=UrѪ cCG荒uk7ǵl1M_w-+լe&䆣b*ھ1[:@P㇏޽w?B, ŢMEu,Zjl|'>!]?A֟V?= 2uǹ3v3-*t@#?{;GWZ}%g5FW?>He=>ԟIeJh\J{zZvtDYOW3ha֬irB2аgsB?@CsA ':N%|;[]Է[%o3=8R9!6L\Y|Vձ5JZ%5ߖU{MˈзJ7 CG%!MW&N=ѡ֚sO,/F?Ն+涊T=ٍGmP±P e,<{N,e1 c^Y즿 _Q(L ]clOXfZul걓"Au ( {gddsͨw i҈mnsU-7ꬋ̣ ٘3±uWO ]y^fc_bڱPnC?S,ش: Zծe īvFpjQnffWlw9W8/ cs*QT4s`:_jB8Գxhzkv3pm٪iLհܰT^ B:XQEkyUM'36ٮ+vYjHf㐊ъ$.?3GG%cSg)+%I&2T:J3&=a3CÜ!x{t`˯Z-KC[PI4EP ]BX9+ b[+j`^n%G^۞:nJCfƔBTm\ꉄ\nVKvk ӽsnjgOP67٣m,^:gsr:[#(\Y^9p8G|Lfehu{Qv2J8l8b7sWKך(O#:uy})ԍ@6O]mQ< - <4P^]k{#6ӿ¹{_w0ljll$2G]܍Yf C_9Eqrꎊ;P3C &J5o쑆[)mf{=vۍN~NF޵diMRbT]kL%!D~rEK*aEx7Q93x̊݃3S9qZ`13ЇڌjkH]\,U|ެ3l<Ϥl\mf2-r+e,@#2|T -k8'6δX8Zp6vCi &{:c7 $/Zק3z.jXZ8iIP[}IP~~ g/_?;Vg!|5͏? 䑕 tJ^waO?#ѸW?wu?~~?>ݿzAhq(?`91؃yXZWajcU~= fӀfw&+1iQf))fi3 [ϥ{Y}^N[f^|Qt϶1ì #klӮ|yM]or6H_f7ivDi^S҆'fZm>E{#@*+΍U.L5k  H;:C &|kӔh1&ĜPVt\%+52߿tElfN7Y F,:U2H>ggD! vQ)!^]=SRSTn-N܄zM[w4_eC1'Ŧ/{TZ^]+1kFw H3mԗee8iNFɫd㑂," y,\iIm=nFˡb=\IM2"`^~`kp>ۉȵpvsCtDgZ]ߤ\ k60M4{дVZ$hEEzbiyh?wlr[ِwڪYQSBCE,}o7g1]]|m8FQy:Ā#{-\y*Zڙ$nXy΃<=eGɏb92yd?,_A*b 7#Gsd~Ł-_.\ / Wo`# ܿ:*7$\K '\oQ>L |p&aɌّ+[~|N7!/rD8im_S^^I4 ?'2̹&BAXr?aaZs0yp̋d-X`9Z|h:08Q3cLfw)h rs"i %g"<˚E&UPASUM¯PpdJNi`2H~Yt՜-w ̬OM f(̸6_oQ~3`Bv P{F`Ү.*LA83W C&c³/$tG O%2q@($N95e4s083Ҁ8c(&iTXUDVIMĭgoZCS0\Ua t`nKU 723=d'7"EeQ%H ,GwОW_Dd3 nqs40@bhlN!+1E?~x7oo=a.''O._?_˓-.}ܢ] oq}߾|^)ބwf/ܾӗˏǝ;ܯo?0~ny2^oNjo^_/?~[߫/d VsڃuIthGHR sr/-3V-U]VȹJCE"hwx|A 2yu~(u?9<=IW꼢q4$BoJv 'daJ^)hK{y0)BÎм SLRii4N2fJEwhT;"οj;9"7kY7wyg0HR SAR%_t?bAJZdOa p8@xwrDx+d#) )RzvlfLH'?xG[5mxq5q)L6sh'KGW8L.2>qC`+pwoX^S8c\Ӆ4j%: 2[?,s+ 5h,U܋,Xf#vPOM(k)XⰖAw!D @{xԸVP2ݠ*f?O^'i&o"*pK.9iB&o%TZ[\F1ϩ)@PXɑvY# ~D$HQ5@C:T8 u^8-%=tQ7cq%;2 ǀȋMP0g:"e8 8mudf]"Su_rx[oNW8sKf{ h$+= z0*dNK:yu2РAQ\ U$͋q[Xt&^c*{;V`Qj%X' C8`O.@R" WN †<@d7đgj e T"+:(Y`_2"s]ʈ #r*u Epaeźw_#E+z#64#M(_K;Kʔ."4h!-UD+7ٺ1:sNu">m}*c9^d<^F5 7&*Md)BaQ'Ǭ 0ms-kE5CZW1>[ iV R3T"i;jRfi+ޒLbd/& b f!{a- b˫ӷYBeBʰˊ  o(Wr9yfu+BGI 91r|!<<%5m缭:+%c/JBH"0. Z0 ̐|+V|(2MJa#^jY0+yxfZ\C9ePZ"ߺsN!&uQޤ>ͺLBgw "ْhZ7+:\#b#٥K yIF8&I:ZL,;f>, ]O'9E\7a={Nx*(қŶ-L8kl6ɵn.Uр'yRW>„T @cvˁ,/L $ըEƷ\;¼#Hl@ t{P&:):N'.O0@OlL_!x|8&3Tk<{nA6QkbBTjmIe*F$YW] gMI7S7ˤ nՑH9<9`5>ΛT]O.\֙Ȭ|MY~뫐iğ)ǹZ1"9;STO؟x}ͯ׿]r[qeJQSwORS=)g;H3GdM`i\EN / WIE\-Φ yYesvTNR( >)(TQPANO'¬!@Nb]O *Gڨ:Am kƕFX%r쒦ccRٲ,_G/ɪS8Pn#yM - չ\H#Pwƻ@DmjuGGWT娠 Ev d\(ŶŽjrd"0G7Eq,05ZI>;t/7 '!I/%F#a V6oP,urWMif&ΛS%+X87}MҢ04&Xyp! p6&`KB䢄M %T5D5q!QShbM RuQ*(EU %ᝈ*0: 8 ENhy2;Xu].}bH-(R nD_-A lA؜{˸݃oJOL黻x_!n97 Fm!>Q_g2^=rG>JC@== őC/E0ȕmA ʜBeR. h,oėW<\2J2|Tu{l~X1:\]$VL8OCcބJfKOSyV "M1:*-b_L7eudY#텆s*c<غD_n0Smn&2!Vroa&BALT#Vc e Ȳ-r)%ղeMfbCY81řLxK +/v(y`c{sB$;NKa*5[!;x^jv<İL~{m:]jYXQ2^@4N9X&nppRmY+V"Wm9Ƅ\6g+VtCa:Q;fUqnT|s,k&kyf}KVR*LY -M\#k D1Ni/CU,C *C6ų"c1^tjR'ZB:ANIJTN,7h[CpXp89e"*YJXɥ2Vj1Zq2WvzS 5vh氓21/j7]z  Eo{{z/95s~dL(ۂ_M᭙{BB HM YhQPXUy9K.f$ [ |␵m`tQ _՞i܏m|DZyCtszN0[<$k iP܏?|nӀDev鱢b15?crH"ag!{Տ{8cJuh)nX`.R d|_xnKK^sqh >&4qV+ O^<նV͟|mW>P˯_}:'[ Bu U_$+rKo>j!LT\׸e9 aбl>VjfQxxE4w"ɑ1>4 BA >-66Nmuu;rja5+ 0W ԠoD a,ǜnl0Lܘ(@hÏA1|"1wy?~e 15f 27D|KRszHQ)Gb0x8HeB9bYl!FS֤P$ҕߡSsGXj X^u6 ޏ:5x>^dJ~ُG)|\ +:1v:Km;%$949Q%L_ \GZƃ{~gLL1B^bq/ןT_=ZO9gp.9';%`A6&g$1ti:]C%kV,.1s8&WPI]y6S?9#,*;q5Ri? ^=@aOӁ+ quTMi(%a)c=a`uUi d{Ne,]FƎol# chK;A_UbsTsj+M IAl\ c;vDlжڂH[ ɚ)mDNmFw\mz뀼+.sW`BL Ɲ<2}$U*-ǛLR%;.FbBV7qY~sy7YޤߙSqfUd'榸reUW ^zԠy] E@L4ϊ 'PZ o*.NAR}s%KQi-gI* U`v/L^ShJ+dK{դ_@MC)cN?aީeHLC]4Ni(>NC. ! uIˋۛ;VS˧ܪ?8ӾS=^?Pd×wp70sD Ფ>L蘏5PBzs :yڑI:KE8:WΚG؈9i&:q3L1 GҲ"3p(keWbdۮ2,w$O<}^]ڍ4?u!P5 M:N.©z̎}~!,(Ȯ%1|Q,\ZH!xerjDIQ0`*T5@X΂v`AL(+I`m\ʄes>UAPjx8-L:e!TA"<7OYԮTmaX>3P̠#d@j!IW[LYLO(7‡<6:)ݴ"ؤd]<6B„:CZVU"sy 0"XVU(VCD1iӄn6!d0M9Vg0g( !18vaP N ]/wP :BwX){IHC9QzOaK(IH7<_y1FVN@%o cI\naFz?./Xw*na2։~%7s]B ¹_"Q2|`1MS}02$!ڻ SJy 3ّ|U]Iif 1Q5=ۋuE!$V:/)n3d%_be43"n,EHb(eYTPب.)juT֡τ冥Q5be X+)vNvN*vܣ0j5H49lFU9PՉϷUWCAEChz,0'1&ѻ2r5N 0d'b7&BYDsflQ)u@{˃s4,qC_fXYռte)?l5:W4gR9(%Ā IQe(NElBgYgh#&.J+d8e3b})8BC(]YoǕ~SB־\Yf KdM(p$M@Hف:vfR]]Yq'+Ky2IʓA?b< c{ҥZI4OCM_p>}!/}|(_:X5~I?I4yD^ҭIZxF I_p W/퓋'ϞL?ݾ~{y⳿}oʿ|no^>zyz~|^<_||×/Ӥ16I#ig_(kVm?ON%k]Xo?/<||bKjG!Tq8JP7.=!ݩ~-BB|z! mH*; dڡNK3r(C>FD9,9lO#"ʁlWY\eB XiKEC}T"ݖZM_U6ƍwpә6념m".%kۦHtK9NtiHBgsfȫu+ʚEN?/h iWpi~Էuhƶ!Y\aPgS$CW m$GQg+iL~;Ɋ `Hļ41mCay mI "f+}ax.[R٨JH- RVBė5UځB'v|Y; Vtz<9t|aZY?8 jYir;|L<c̖pt bOUtktG_pb>y>$U;&V ;:ɣ`HCWUb`y@$ƀ; 6 %6 {"76a$QfPYUDV(7f^up pi5O)&ݑثN1Ey$fZ()\ٴM/Vڴb],͝jtc91e6YB6 V.O-6CȻ“4ޔ@62 i@-̡;ma< >DeJ6G3t${J4hu$ "]_Jy$1EƤmb-h "YJ|%hMAT]lS$: *pi'׆迀}3nj[D3L` y8zQppbZnʐ]jeQ@ C0ˊP  @?KK^hK^`+jʢhr^3;Ö/ǹyMv Y&=p{XKR9%6eDb1Q7[yHn+>B[fIЏzGᖦV, @fe J5'SԣWJ@NJg8k^DI/S!/C{²W5$03ૹΞ![b? >/E{1\HY &Xy/O anP@X%{day<)-j%kvA j'?Ƙ; ޘYd|˽g:NlRԎēdOi6]6euSmb4 =zJj0hp?%da1Jc}Ug;5\HMм7pޣ`3IAt bހcS+4hd8OUa;-wP?LO{t&V7-4 bV,8 NP\L!Jrt"vnVVBð 16,B(e Es׵2 Y]@(Yj)b@,loN 2Wp̶f @b&4Z3\FzI{٫\̗LU۲0!;CPM2!e@Wة, NPQ:t^Rܴ27b֩q* y.NmRxk@hyDUI8lE"z/}YA_$eI<j~l8BT KBZSho"ЂNCZʳ !u1K\G{K9 ,SˆCd3fӚY8P:0`:} Ŗ~HHG3 T'  g oO@{v;;<=+f='F*j` $ 6S`K+򴺺Y-`K4ZTbtZ 9Fw`I1.Έ^Nh@cC޴]YIܟr~zr~p}twzxgnVu7yٮҘ+H8 9ͥZ&\Z-uIxӒx~yy|YT2jƙPΈ@J&W $IRˠpJBՃ .YH#a];0 0~Ztrpw9laM*|,l4\$/(y.E<< 3/LrZ41ȉ/ G9K&Es^/ВT=t_Ǧ7"ٛ#VOx Vbu 6WKU2RUK HDl*evѭI,RPHRCsqBANg gyz"@xj>KVZ]) %B*4{RP zL 8|l02)dhB TG͓ڦ|hZC^4-x@ɑJ JOSE3yiEL{L`f3fC+{ܼ.Ci+oXgR\Bf PVM[n0**@IibJRݻfCxs9 (N!ĆN[ܙ,h+k/7ޗCw\2'`̚LшEb,&APIBvI!M`x#&N1cj0?G904%嬣0贮WC6v(/|(.V:C,lKCL=8$P/ǑB]< @e^a;M af98m6 4gP tp}U<^F=B+dhR+"*S Iš8HfJ*j&0_(Ρ5Z5:8I2Gr)UUi:fW񂪆 +@ԓfMVSs6 GR5fdxr哫.lrY>|56ͪf<l>^|F9 _]JadRoy^~qU͏=3<>)7q(AQߍxZ&Ne,vDIeOF[ Z}n ۳Duoq Sz,\8ᏖGn9ʀev{^̍9~->#2n\"-YGDrANڿ_-)~r)-.c`*@s^t+w:tr u^A~PѰj`4Oa[(k&.xN>E2_% 4 yHXxZ򧻇W63.Sۺ޼}oB~xu~C:; `piB<k~#e %ܴ],nȉ A,F2l@3ܞT!iQqfpɆܕ۪4~ŀ#WHVyFF̣H~ &qsgQ!WaM`QTj&WIm[DRVO ܈Q("bWIDmAkjG.jaiVoo筭تGd5VK"zXsy9 Q ORtmj ~ 4/rse5m_u.)H[cȐF@m*OXpzƁQdR p=bEqHɆLxEݞHq.8Ĺ0k `$-#ːAŸecx44OIyE(H*(.(H:ncm~% wHF2$胗HzzJ[2p:&O=`3XInuB"X>%iNmF%JkJ.O kON*qyK8I, GŚɢR@l2d&YQ#4dN ZlFxP|PBل{̥ѪYŸsO$Njk^ ƔkҰcoOpa4H|?(Mh=IlhخgmI7F+"ZJb0A.aD : O/р )Gcq]^`]Ø<"Gp.KBuVVbr\ [d2@KN-8ynEqPϞjuʆ* ں.:<$yId/@'C[WYò0 2XIZY{Ɲl{n BeC ɼ>p=\7]ڌi /=q m:2lw$ 0->)*DQ>.Cz4j|֬t+Cu?>G'ˁ)9'bÃˢ[fق7ճ][1N&G*D&3]`rzKbb"Ku׍M޾eSAu] T @`nU2JDK+-;.`}Uv+Kn(3}h`M>hr' xI`D٥yհmUr䕍p 5&{pw r?vUg%άeވɖR[j5ѳ;Kq`CnzÕp =b7̛Ѫ*ZZc]4H ۷{\LۡdqиX7~z=vO0> ׍~(ɪ,IdXO$ 6 ,LLjI"*2ҍJ"p'c"[t[0ֵ2l灾r'mX= cn]9t-!y^% M*;Y'Eua`wnz8AX淪.G7b߸/r4)'u䆺L@6*Bv%)n1X /w;Z |v- @n*l[ѵ\!=AbNbC H8}e]ƴ/dcWZa&*pmAYfӇ:卝g"8eS7xj6fRQ7՘r(%785k2WΣJҮr%VK|קMwœYT%qbnCBK+rE{YiRۇ.?]Lok/nʗ|^7Â%؃EŅVfN2ۻ:4z9.rXGnbָެa,p+ת5fC!rrٗ'n' |<夒biTc9̘cpcp4tuK+!R#@7$mky>pz/6L֛5l~eј+arI; 0ڊӊ/g,TzZ{4vR[&Jq'l%ɅCݗ@'b畛BqA}yAz=U B(a%5"ް2M3ɯ%YG؉0%d$b:Cz_&T$+*7 ;n[i-jGkja] E?Y.(!w؍fJ |)*KW(uѬQB͢Cf(qt1x(_ PFN28ٮ͒֎BwT `#[} gI]͢ʢβ-d/ Lu:#Q_d if0wfܙ;˩:YԗHWjyiҗUtuߟ~zu4o2gy`!<% gK'X D-C\,n/n+{W  U$αlI,,>%oF(A-Iݐd O:zg^^_'ӒoYrdrƔ-)^C+^tʒ+&KgԨ !|- V~t*,im`CzZ2ץyzh_<`%z+px1]AD;؅ tnM%mtj89D&IEJ e68$ "I-e\CviHɘuCKD]+E0TT+rh'`g0JX;4ujpބboŠy.)"4fWbr+bfbnyfxKP406K3MdTVc1G:#wE(dk,q11O5o-."*eؠsF5k*]oE# !+B(p dw\*=roEeBrDΦ>DLOIshl9iiZVe]#|MATgKjmBj4 S:[~ ɓ+t[ BH[o@o x-Up!ӮDZ&RmRF|W t o ȁJHHmNTiTɧ$I)[fdV>597pR;.Gi$QW-wQ~XRef.4p!cYqD h^Hx]P# ImAy[E^අkzzLp7䉽Lyu':hS6g_\w? C/#i60_'C#]Y`mMXTrwh|cgvH۽4S ҆"E@+IBVۘ w_GEau0I^2Y1]7ECHAZAch5Ѧ1(˘1yNyRbX#QirE˰l pwMuBb&<ӱs=;c7;5 ! MQ״jE4`':U)JgЀ =8id0eDФErWa>*9Sf:ժ4|maDo*&GXnhII(U9UW`'u tc`7Iՙ qȞZS(bjۭ)tT-Ezd%W\.\)HX I)AkiSa٣HH jDOdY!"B tv]IC7iqK!Vu%ȰnWawҹSgի vŬvbD$7x6w"i6ߕ}}K$UQQhRt#t5{>;4IA(2pD[畘1GvԴlbD {ȸduSSTa ͚Zl;^Gr ԘƆ ے6|+d=OVul춏Tw^QE򅰟b05 h9\D T?BCd5}Yo]7>Us @8~3Dplv@?ru#H{;=ğYsB<=p'eyG,yot>ڬrxuCX [AC 伉oP`dܠ%K7<^j!`㐜C uH 䴌k|}oP<:$yâM p` *BdRZV7ė_np'i%L.IGwT7lCrt% =]oN*طJ6 oCP.y5H[FAj?2HqDutx>{ $ eH@@ 6%2nHIq,0$8nR4[o*3,,- eWj_qLW/||I/ǟ<Ȩ?Ï_x_~|Q|Wo~~Sx1.^/7|Wϔ3y>|7>p˟~z7o^|Ko߼xW/޼o}oNi!y}_Ӌ_~/__R|'wz;}}"UB7|\ yE.ׁE)'Sp8aNk99)\/^Fo5Dj\^'4 "wp躀(!dx>1 4>Ճ"GmƧ< MJHDEp` xkǛů;xpV% >/E+e%rKQD^|y]0]}.Ӆ4ZRL vZ,;޸D&n>] Lh8kTw骽NN:= tUOH#Ix N3n֯]{}-Yhl؂`Ңl~ʔiE5־\MֿO%\{ lm-&~k"֢ȍOtEKSŀ@~ڴ5H-~3H*Jgp;6UbRkjWzzm\)HF:OnFʏG#v> ԂA |A#O(Z3t4 nʭ4<`"uN$I=) f3ՙ\Öl*iK'=QH6ڕ`E:IvKm͖-lP5kifY3FQhZu|t(+7mH"՝t({alnJG?ʠj_ta*N]] L&bLDupVl.CP"ӑ1LIHb2D.$םҨ >#t!2\z"kGnrͨ]t.Gg8(Q3(Prv<^'pkyYz.d`w&MQ(ldd2qÞI3% ʎ$ ?%Yt*SmD0gx;PSr']׊\rmg"9`"i)"Mɂ|Rsա$H*\-mUz4,ѹY!=H%&}..,P_Ig<ϸtz2WE]8G`aSH~B硎t؅&x`5g\\Dr&oUUXUj&p w+iNC40k'!)&mbxrzr6~Ϸww \u{ww,ߢ $\Il'[>ُ?>ū7W=* 'i Oxw{Kwyqy7ww7}|w彑/૊y7|x~yw%/_ǯzệ8F|?;I}q>.T_NRάˑ}+G=1 qMR( > Q+A )m(W]7ْ-wR)Z.'l%yLxS0䚟NA C2DU`ihOFI^ Jb4*/EU$XB]l PZY&H1 @Ng)O Cɐ-0!ARxzKwDA*8NΏVVbIdq٥}E xS[6$-Ht%(^cHtXܐ#0J1pALg"su@lt BWŤ">=>9{-|Қ?ZؔFQ0XRT63'"5l|[RI@tV,Vh yyr@: l1Я;NB\~,,~%mț N&21- Kb qͷ&1. T0T$6>_E?9  ;cAB9 RD' '2 C뢌J #1 as.' ΘTa<|+%+TvqΎvְM.7,Sc$K4`C'I\ZU(HI9W!f?SO1J6AeapWiUPlDN0EٰX!py Nd &9K٬x"cO| ݒbƦPyF'%ND)_3@F˽yX)P̢u*)`:_b]YZP)ZEi&k4F4jBdBVH|$aBZW$I@0Nm]"RN-uq(ɏr4p, 03&2 ʕ A,P? LJ|E7o7 pM4  B0i(7a7@`/X#U%2T .mڈJ %LHuI EtRǷR'J3YI05XkӦ)>H"6O%M[҂QEDɩmhuʒ2@mpKy{x`m"$ޢtXčT7U aHsq@gS^g4拓) 1$nC4]ʸ:$% njb]j6~ՉQ" @!KɊEotZAO׊X"_=SACón?wV@Ox7Wˏ? ş)0,)_) 훏?<\pj$,=Prm 5 FEce( sl,Pޥ#p{@XE' 4=pc]S.M vW C95S{@%5X|haUД9Qs -!`^z Rc0u"x.5yjO"}R+{RDATڴ]!z<ԕ=%(2i\X;S¶[0*eUF.W\{^PF|yQZWaA6A]ά:KDjKJ ԅjj PX(Ϯꕥ:]`0t[X.ZzWdbYUSU}jm p"EZ*[ m d$tH+FP`}ʶ*aoP kU\VٳXT!%P[7hSZ hm\>s5DP,QHҮQyX[Jj <ȒİLG .,xk݂ӥL~>ʰ 27*qMyuXێþ@=|[YìΉ#X" 9E {KVڋk,& MkUlۓr4':GWoe7,92*o>n08/X?,ƊOf--H4_OH'k*R"2"-cǢ t|e^Dc0QjjT*mÊknj tuĚF1)kUj8@]ZX~gJ URbF@pӀ "$Th[˃];lKvV''Oy8d]t}{/KC+U Nd^?R&sga-`fLC IԅfcUrMBXT1rIW^L"*$8f>]wGSD{;a&'+dfwkq3{-?Q"Ër~d;%vCG=4g*':049"Mb`b(L^uf!p"qف.2`Nu}y> [6Ttxy3ol⪁ч莉4mܘOQvGWl§A8cS5DEV=15-X4o6̀f:nqA=:;0"& ahshm;:-iױmXHh<#޻ vR|W Vi WϤl %)_?O޿a^|xUJLgg7 3 TbLm&},iԶy#AIhnbJCu8[gbQlÎɪO{ϵ+5$Q)5돁l)VAUTjc&#+6QSI`UB)Hv]Z:ߍcP1۟^j! F[v-bT- Zκ /Ā .wN+SDG<& B=$cz$A=K٤:aK#ԕ+5۶{rβ l$9Sd TSa0c_lg֊I8+6#3P]U#Dd %DʲigXgzϬݑ|!5cI09K'_I{ى]`YZ=HȼǓͱ0%GҾ-\&{~e*Y1^&, WhQ:nu1` ,$46-xN9m!Wlb)PAiLl[[~0X SQF^q/‚QYj tˁlM03dV-zLӉ;sYt %PLr ƢOL+ }9}ͲL;o{@1-R'p 0+YvTeg|1i\[J$6<Y ՑCd+Y}ՎbN085SmIYfБ޵]2$AuKTy<:dƳ0ڝIuD>ZGJ *pɂI6ÎJVn6&!RᤖFdco&ߠsÊ _ alyy(QzkΜgK%3Z1 # 1N-{h 1/-=!3 _;:w n,sZ3'4g 4 ,IBSiٔ)1h mY:2i.7p\3%[H)K؜:3`v.B7a NAc{:F5+o+3S{(SlvJBcaèD8t0Thfxvrl7!-}AvwqƠ;<7mfTn7Ֆ (dd}jR9x8a(Pۄsi SgR~js߾5!OuO͓gY0WL3ZTwL5 &fDg8oHMa9_`ˤMdVXX YJP+]?TL8u~tlbW;}ǾP֠O[KkbO 2BMA`N烤`XH!ZlapPEV%tJ<7mJ-mQӮuDjјԊ1l%T}n۰T%zn˧ E^0SdX2ys/=Pҋ E9OyV0=!ceZomk[oʜ[ִtX@F& :>PtVZ4|F.Xs钟X- )y *ELDfԕ` bkl9q'. (TS]q}zȋLCG E^D7my,ҁ8T!hN53F-so %YrjwOnKmk߽NMNsMnl {G=Ao=*|65UtB $ytFivOD;4\du1^ љ&|;,x;@,ȄAԁU  Ãl1F b 4W$Z\4=Y'&ЊΪpݠg0>ЖahPb+؉߭LBB+5܃xbB>瓣O2^È2DfKC L`ljz܋%ύKKi-yD-c0~J|Ml=w : ˲z۬Y?ǒC3l'Xd?0%  7kO%eh+ bs[Yٚp_sdc + :Xuه u?Ovf ^x ڲ=tM}upP?d̗mݚ\җ4(21h-0X8T[AN1tm?k<#;2" 0P,M?')&O_ĸ(d q:#3D\IDa02bbH6X =7On/ > JR廿|~y2+!gV([)O(7)n^|z&rg?~ ,,YyI3U` T(EEhU[%PUJ]Y... tH]KچWdAW c؋_yJT/uh XbC pŮhۮ6Yd{ KV$5mbaf,ԞK:]sJ9u[rr.eҤXB  Ķ5+Qg9MbcurnՎfU0:סDjD&CuuH@Bw}T%vKeFJ.w\Hv *]՞m6$g ޠ뤝`]ˤݚ jf&ŵBR Z@8qn|C=˓~Y=p6KPO0 wj+ڐ%WF iO3ƊTL}nџ_܆w*uT6*gO-*\ޡ:S?DLү}qr j{d;Mxl@T$ȦȎ}Gb/Nj9%?H~zM -Бh5|v؅Юn פY/<T]Sx]REd7W Ig|*-]S#\fu7r蕮2 0r6,8)ҽA岁4F~ywJvaF[}j =TeOS:P씑 v:sL͂+ft1ثf~"Gzpm4C9)ACBݡ{rf9N6~c؉O*{ݮ ;6Xd4w{أ:&74!o#):IҿcՒ:љI6Js^֤Ǒ TD> ZbUm_SNjBC",}ێ\7?4qNf^Ȳl}ivQڵʒP%7F@}2"xL`ɞnYS!q`8jd{?nOJŋ<< qtn0,5<G u8Ⳉ&пͺ|!?8_d9qsbv^X n\ iX~'[}rxu~rKov×r~ӻ>|swLJ?xW? k/ݼևworwuu_oCWWC~z6egb߮~ū7zwoƍ{ F?kj/Oocs"J>A\,(Nw(P,KbMQ9ϰK!// 檝|4|22e.a#8Gy2L =I7P-57ie, sBabD 6xpʽo? _8X/ˇ gl#y9.\.UZCMXgv)Sn*`{Aci,0s*DW5IsˁvP@E0 at|3zAz#{|IwB@,sq/BI&IE ;hYLq1bPe<&Uq<,rZbOG͓8:fwD&U݄[TEWdЗł.2 )C*UPfg(S ܊v?E`3q[J5V-6̽ڪMJ7b zSc(LƜvNBdUA 8A \ {,IƧxѮ,Z$85WqQ{YRA=F'յ# f1HctEX sB5Z8b\T6>$41<&-C儾 K`Ϋkl [1YSE2,kB|d~+ɴVYH14*4%hJSX(_|Wm.?_|CpÇ˷Q+ 9wG"0JѽGL?DC5( PDjTBڨk9s1]i{֤G=<*j.p⠒ԁSuPN+!1Æ_r%[ZFs/QJM n)"di-c"mNR#*{z$T h"0K)y&D:NOkt7mܚ$ssT/I .*g{vV):QDv3wx&^Ë>D/N6=!COi~05P&'OɊgs, -OzhŦgvtY_ 10yTKXr-E* ]㒃zKEvpA \g/OdWnɏS0K[dP;%Aw\!;,"Z+pL_M1!xIz+16.*[XpLT\.c-7ɦ ڥPQeS.@jje: =KꔍАijtjj-6 <&X2̲3= -4Ϩ1K,ΰV!:auʬZv<8Bؼ%zU~2Ojլx9Xwc9Ģude͋ _j.mzHϱpq{jRXϪTJFTȫ*2oRõt?,s_ɺ04).%,y'w RpGիw @s<1TU+}|_n^v] ~o.RRMI(z}s'tw_>?gτyϩ7}zǛssjzƶ]CYUgD^qvājNH7nΡ\&, ;L|&' #u"W6 5۵K2w.#q窱B\$@I :LW. ՂIe)9G8[U΍o94Y ]E0,_΅Ȗb^uߩ,.'))84=2C&5C"R3tL21&&f2[>|TcSч+G ՀFQnW"LQH5݇;blqq]W3bhΰ4<*"f w  `鸼K #7"f.%z#N or5|E;6B޹qe>Ԡ<?{ꢭֿ5zhRF-~ I l}Q1aquc$5/ry?h^=dgz~#;;kJA8)*4(h3pkxPUitTDB;z^}QOWV`ltƁB/jYᤃGD.ztu\5:P< M%J6qv' D{ Cɫ)5T\6^|!uK\@[\u.3.5^ P۠͞Ah3Ol-9MYbf3D-,2U6:+9ԛ w*6̩/EV&1ILj_}$FyGM 7tNhs/zp 9Ad2''/{g$r⽳7w}KQ$n%q}DIA~?_=ZC#nf>~훻O{{{뻛w8RRP\L[dՌnBo~ gmRU.yOlaE!_l$1j-/Rt ,N3"#c Q 5 +# 2Cs klxHT{K\6FH=u)噥) ,A޹ eY6Zixα+H CW$) (uM`aDYߠ]f 5ߴ—s)LqވF-f$j-RKR6b]4X-F RERP{`JcL{io<䝀(- &`'/ٷmYb(6ܞyI5ԾA+a$+Zk[x\r[1EmoJD(=Lō@|9즥҉wo95[x9GH7p-HQV19h C0iO!Y<`$oc̴BM"5>i5 Ȑ\Jv^Ri<@,^ pk%j׆QFίI;tɗgEFIfsI2޺٬iW*EyM)9IS#S.s+Ek [:e; diͼN:^꼶HnxEXZV>\O1yP>7QTK>ihvUx,1Äe8*Bw(Ǡ~)!M *ju0+x@U3Pٖ+nxxJ F=u hS5Չ ״Ftz hGT+zZ=?,)B)F~)V=YR?zW,١dG#b GCUdo[kV#+N)Pkrh!LWY8it"fꂪie26y ,J6˕lDYDrm=9NtYSs#4[rn)鑊}妆ET--fݢ'͙{Fc."Jy.- I/'qpBq]1Dgc(\n˴{ƨ.oςM  I7PKnƤf4ǰ ocJ2ԓД*w#AUfDK{86ERdPt&yUǭJIxe|dIkŅ\ˉ.#RU-]k:` b1YVW(DMF>ZtPaӒ6'i_0vKҨ2x141m;Nb2-1Oo!T{S"WW/ (,ry3 0 a3h~ϞI!_pp%nr9ĩb`%oiUϖʷZ}YTeU]j5}T(gFBɓ#Wl+)ب9‘v6qnI;fmWϼ! kQ"wCj|BZI_ɎBקlj& ;*f#tT\2ݤz ýʼU@RqC+. n Nz^^-9nxmW]H/2E6S/:Ӽx^υd7ئC`D%ݹx',.mmye*~YZJ1\5v+#W 1 Ō\,&0sB2;b\}q1ⷊL9p|ϿV5||5-< 0&DYJ\ՑL]tgFxł r.Ate*d}ZJtXTXHJ3,U)Jh޲|%T75xYm+ڲmWm5G/Vh3c+19({ʱRL3UG#fd\\q(32e77aX+qj\ؙYi4n`iTij AӀ^϶40͸}nޫ<:NC>1[YH5jO]ox4t*naɂiʤohe+&%9oRDvgq]Sh2lY}N=*1r`-q-6j9SgVollǾta^"E Cf&jSHf6sl;c+ƁG+k6 A_{pB|6jW/>[az',G~_ّ_"R䷛/S7{?/ ~QI{2Q9yFJiriG_7?@fRUAb$ypMӫ=U/#cGF8A!zДabꂊczp༊4i?D8+޳2BEZ5v<8i$~dL}I(No$ S\ddP>Nd%$8 y~z#@w%5uggvGXB yZ8XZ{VU#PQ|R:J,靿P-uO!h~yl\f4?x )oz; LYNQN)n1!Dw7Pr!3m@BؐQe.b=`,@ѣ LPag#f:78YS6 !A!m4319``i_@,XL])5Gbzضm{~%SnA'r22 L7Ee){g"oSeDN=a6ێ>t=usg~Q!lL't~{ |TS* QK},e-<4CnV[)6MQ2[!M)^5ULRG;|_p+Ñiv.(%9dUE3^sEKSؐ5᭳܁ T_@\R(CJ7&y$l-`QI6,t(MT7UX G45~*u޵Ek qiDuRGKr7HH@㑹2i/z'r?g9OG"D`|)Eo>>>Y]hն$iӡw ʞ@z^b3 [/>]f \R~Oސu}}[8~2N5&]oK?_\l>}o^muvNqhzQMkuiYKWS*r?N65w,t z˦l]]b2k1qR%? vF7[18W[^(ZgZ) ani] M׹&` mˢ~jϬ_5.)Ͷ $BAX:d(R+{ϨH׏vύ^j֮ 79;^*q [`Q? 2Ԧ̅lF䄛REUx9]$O^<{.r݀O÷e&,AaXECqe_HW|2j[^Mkl<η „&=PB:S 3sƨԠT={L.{RT?Y˽ 1u_6UXg%R`W] 3 -bk(jD.;M[ѣaKB 6c&}ڜ]eF}i N/v5 NaUr-m(S+dWnd)X7"Tҭvԟ„"e.oG9m HCg|Qf8^ixXf^Rs|{oפ0gLs(50NJga>$Y˦[ǧB[`w؟4Ugh \֓)rjTV/j%='颁PqYʤXdi"r\TJqAUn'Tgbxw5fͨa˵(Đͪ]:kuzk bkM_:,*h؁E6m.fmj&UḾq>/-fT[%Oδ%Dk"G$;h>Pz$ٵ4.#=&V-ǴasWcBǮ({ܹ׆eh?jÝNM1rH.ט4p!Q,m~n9FN1*e7&`!`6KOIm` |7 򫫇o~L-4?ŏ ɇC% XJfbBCb1}Ǒg.`=杕-ha34HoFDhi֒~zUq嗻Ow޾}˷o}z >޿{ˋ7^ǻw߿eAg||OO?R_}$O=y/yuO7_xOOr/7??o?CuSqF}q~%0\=\g]x WW@W9l̍^g60\g8zYtc2ixY=Vuu?g|5.6u<|x/ns/4>6jؾk&qW޸2&_qZ_[Flpygalm7c[p>7΋q:K >囦v޴F\n>_̈~3͛qW\3ZF>Xm$j•ŎL⠁VO#ֈH+#kZ ːjgS>vÑFygQ^9<ԳpH'?Fܑ,_,n1H~H}&M8"-Hu9z, px@xH "$Ҽk͟ D:H ͆m8 rlsEXJ]DRy٠t n@ťoZ+z ۾L3hɘj,( LMh>"'P.N6oa6U(8)KSp-3V_i~o\]iϨVv|/ ;n@nFJvi!E׈E!]hܖ]+ܖrpǍԮ˟ X,y&یcDqQG6Dx24X|+),S=)Bҳ;К`{+1WF[dn Zp"'~>Xm F]Zּ;{|qgP#"ȧx- }Y-v4ns,ܕ8YN-vVrdM54ŵ[s -CL ,ZrX7FDfZ7KxơyP#Wi?(kLXƆ324٨ 3g)c YgƮ9n$ok@m}O!2~/~z>}O~_wooOO?|?_?޾ts>}xײy^Пg&T6՟~?|mno{T-6R&P޾}^xƴI 3:/xLZC۾/K%)0z/%0P Xل. =`d_`U O +_`փl_X.Iۘ_I3Ig_i) 9Lr/wty:t)X]B`*=9 Ϋ|l]Aq)vwQ%`*I)Юl#S@-E\ߣP^-{"b.9)@u6'|hUCDt5P"e.!/;Eh[_m.&ԝu52"/?vb}!fQqO_ߢJ1N7c_pޯ@5.hF;7\CE"1=F/y.!RWNo(W3>vcNB47_$+;KȈz84ՄJN K(讆AꚳC}17tgyJZDޤ76UD99itIߛ iH $BqkL:2 Cՠ48!aXkPEw_:Ts/ PgO%+n3L++͎H&T7Ԣf^XlTM.=5rRU"DžWbBrMΪe/򥵔XRޑJ7Kfϳ6~vg`BQe6 $an(+w% f[]hnmLS5hBݏu$nKARuԮ.b(=B *h{<6V`)Iuk:و,/(k瘸 @sw_NF*h-垞nԛI\ԉi/DyR&/`\㤚L~#ӯM"X5u~;.jnm%\UA7 sU9" %9W+;m!F=0^Fv^pz ͒nANJv[påAfb `c.3L-VUq[ysN;CHVEg6U硪!Tſ)cd31܈$djxe3,K`,L=kٰLAkV/dy0u-Xk1 >7k^Nj._(.JXtqwb[-0?IEMny?^Q-5\ʿݲ̰O~,p?˜5Rɠ2NAJx x$uOGa9=p=/&D^Ssmѽ&K=vg!ɋx:oخ9mq*$?4L(* A"ߋ#- q75g}[xh==3z:dPDz@͇WpcҤƜFb896BJ^VawIO(vɲs8LTQ-XaOo J}bQWSOa.]-cF<|, 5p6bH0E`caabN>"Wuhb d3k(X,d8-jj s o$q_p]$]V1M@sŷ3 /=!XiӸ|`Pp>؝ QjZ!NdM%dv5o tLy'dmvc XƑxbf V0WU/YH} E_AluZ6m Pu#^ے)L_QАڂsl$ Cإ* 9N T_뿭"4?d^Vr6VմBT|s<'?ll5*fhjlF}b>SL؇V\x7b2LP 0$ԃT>G^d34A-LH[8LX6X.!q ,N}H^v:@-{'noJC~\cGrlu% ibg6=L^pP,7GBEWx5I< 3ZsG#OJ_ol̸dIa< k5g;gv+Dkna-Luߞ[!ۺ-V{> +rF(`k(ɖ@>N6DbaSBI'htZ8&[n?r)Q#P Yۆǝ+CȬz j9 w7;; 3}FLqbTw(^/O O*`vhpt-7CP˔"#./nr]쫰5'N1"z2?=W:\ƴ-9půXd*(IV:(j&Qa95dFRyϟ=y ˑ[$1 տy$?aF]Pg-Jx!2ŧYhvL,e+tkcWV`$!87@_ 闡O׽C3 fԢ)Z:h(>Eu1iM(¸w!?}{ //KY{uVoOuX7DXQ%^|-]v"AZfHԥe#7[<1_B9p)Vj" ԻD}x[/tRWU8L v:sf JoT͢E+DjB+ZZ\ĬEe.;q)RbHx !뙺tidPvTA]̡ @+SWӑuUEb&buIT,6.Z]-IP1(I2ٗvwv7RVXP PKb$+wI@'vLF~_] 4?Uca ~%z/Uz1e_ 9^Zy93ՓKh }֣k ( e%Q>hcўq:=k^۪C=AFtA)L{3aJX*Jn8x|d_x$ gaЀ %NYp*Svm -8P, K_"!Crw$h p2Jצ-MJͷ*AQw5{#גjU[ (%QVc*{#l =Q"%^GhTqڊ坲l (#*)N<մCA[VuHbNi&XPa2-9PCsM}-ļ&X>V7|ĻZF /gFۅv=Ug Xq+mZiUf7\B뻜ߦ)C7wZywG"3FdfNu!\ #ᯃ MʾG:;ihPsUR5W4sgJIdFbJ,u p ^$0 =nU;޲zݽ?}d](!6 02[6e;PAc Ê;Nvq!冁ϟ[56*䟣G2/YpX=p-bΆ'dV.lɗB˽sR&Eӂr]eXkh?e>CFW[fV^we~2[-^@,9دZE&~fߓ 0XjPT7jy?IY4߉xdgnUSa'P @%Sl䥗"M;!4.yu8)QuaRF*w)PJYNWs+2ҲUܛLa6s@s|j`܇n"+źBl]oaPv _WB#њլ>P"'&+SjSs׊=e-$bxCcZ%YR9̖2k+WZp6Ek3W6_|}XSL$7fT,0Р_I[Pzxfae * .`CD#Y I8hRsꎚaVTvЁR G 8 L9TDr= γ9"l?!D $Az'5'F8J>GB*$ 0yy3^` 53.D69+Zp&}i>GtO(K,BJ<ȋ繵I0!-Ҟp4)&!]P)Fze2Z%H^ yב8k#ݱQ|boyPz \+xHDpA=X{pI4LJұ+@m OdRRČ)I™ X6@NbB?faxYPc=BP`-L#]ΘQe=""Vpe1Gׄ'~ֶlΌ~+ G`V6r.bЍ- Roqň'ѵK ҹ)`ɁMx$Us8Ͱ]:5J$$?/zRTn"tNxLCq[]D{'&@ǽzS}nZs?Bkn;o$3ԇ,78F|M$9fQ΍bc0qERy (=2/eȩ8 4$zAmSnUx>"QҪAeyiӼdH}@wT홓6:KcƘ-(!o30BH PO蝻BV^쁖',0D8Nj8ґŭOt 0A#Y`-l+"_C%T`+Jjbv9` 1J]n{e߼?u^O/i6ה-cVK'@vt*qq -=vzxgUBwpa=s$+pZMx$Q%fK~fj?;5՚!LeU,fہCDQ!ӯDet$l"iY.ʼncpy[ tʠ@Eӟ;VYI?b;8TijGJ-Suy!δiv](Mv!ʀIt6n ~I+ie͗ĹYIo g98b"sq!Fm]=;ѲN7Eo8NsD4#+6mVIi5k B>(p)OǍ56qONJ٦?K)H#=AuC f}*TMRD8$m+چAp4HMWPGqϊrg?EXX*4mr\))[6ۓSX䮵\fRF}3 g^6$DO8rZ755D]?؁/ȻD3)͟}m^:2ۢ B4E*F&z < im'/3Էcivs# (y#Z6)BWzcor,8e=N3VʗO*dSwg]8]G$Uٺlbs13i|P< Ow99.=wfէNl )|JS97$l3xO:1Ck)QkK֨ip+z?Z=LJWU!aJ~a xۿ{ˋ7^ǻwlqX>>Fh 2Oʡ*Gz U@äNÖZH@'aY?Uhv'=\(s7jՙ J{3GH1>"&yg t!NwLJVnm4m] RvynBˮ12G z]/ Ed:W{u_Jp`^SjYO+=ԱO^SDX5Mv1pCZ#Rnc^^.qNyk/X/̨$gqp?1nPb}}Bu?f-\Xn-AX:<؞؇0av[Cn w5.5B4鑊pKPҳKAK.d%),Ȳ(cv N[)*$O5f9ʡdpV/ZoU܋ sr?X*g~^UjQ?((`Ò2K:\GBC*']Y\~S\ @eMo5ɣ;vrKn'P?~xyN'Nduw!yxlt9ώ)Ջh=}7T9j}T2ʴ;i=X1|c{?ao|yUy||7(t_}yF*?\hTpКoƫ|kkh&y@&5m6< m44%ZTS& N|:߹kؼTwV-}YTYGyƊJ/nmu~x\lM5W^WcjQym]#oL1?pES?Y.29b}Y9U8?4ÖngD۴d҇-eqQ aQij>':Mvid!1_~=G/Bj^x5l%"Ұ"QLJokx_&/Gj=ϓ=OӍy]aв' h_qBv>r3(X}SpCyjmˤrg MLBjXae'Q" T4gc*JL®_)yͽ%Oݥ/i^+;+kϡǫHezE4n|Q +E!Ln42}7o爴&EuK~A\_qMi;;3x3!:*u ˡж̜RL'bj_K!Gqa{_rU<föΜF՜7&vHIt!_YD9ٛJJ.UoBeREO#J61{rv;Kt޻.E>3sR]ZX鿩9*5-$x$TX߉NP243<ϸ.=K#l,\F;<3oK#4 OJ.Ӆb`)ЙP3al퍿LD+tJ&'m(jTb >,m"t<.+<3Rl}af4I%H:3~ԼJi뤓J܄@'eѱ\i`cnkdfűDXr^ϲ*><m_V=.7X9>](gg6lfZfy"YU~yۉM~Y8T1|%xVi{G3;h6xn5 S 6#O:cV]5mRǟY:V7Q0V4άrJŰvC.znqk\Z*ϤcY Fa9ЬVs g*BX)::Xz[-eZ~MP4f6i7DO*,*t| HʏhHcFO_߼77oɫ'/?'ϞaϾB~t_vonܟ۫߾'JcOon^?j__?ϧk?<}8|>S٬CS􇗧ݿw_嫿t:=_}77o)޼CN߾y}uwwuss})͡1_oכwoPyw~wu_nnM|u|}|ǯ~x˿۳?_eU_~B&+ W%Oi&iЇ`5m-Rԁ"l([@< c"^]2;Vr5U+إ R$GVj80\64kzEֳYvW&mtldj'%%eGPN7ظkpG(C$E:-+Ux̹xxfebK@>ԸHl}nNՖdTXaW1o% 8& d};6jyk댵2}Q\ >eU+ڶO&]]YЄg]CMc-ݷ6X]<EW<>W6'w<+l^ta6[yo=4s U>IH잩]3gSbv1-۶yvJNM!Z]m1VՎ""dEj^gdJxKr|tH92,brRp{L@y)l vpWvI`E*V(Ug~芦uvN\/ dJMyY^G k8$#Co-Ա,LqFvŸYpAVӋh\['5pZxh-US2m,[b+PmWC6ڣ'&<jߓ'ۗœVOr$ٓQGBDF.d5|ʿz?J}qёL@/G^t_ww1?p}|[ V] ZOiAVAgU@5U 7-5D$bI /LcK6w.Xꅵ0T !ǂʜIZI<']Fagt mhmtB[K_?;0;brł+B*xOǿy . n@؅PBt8#vb%}؇~A l !i2Y(I}^0g(&$;o+]! kǔ3 k2dva5Gs-(Vp9D l!r^9qJc§9`i ٸ*svtvqE"I4ajTYŌ?HB3&Ge<׏y[f:W Ϭu1Y#ZB@nO,ο_)6ˆ5mJ0/:) 1ݶhy93Y, RJCrT2ekʦ2#S ^hwތԁfAZD-ylJզ96^2yCuL޶1@9 ]ET@rR !J B rW`N|B%Ry509YIPi^UJA&L]cV3_q (ua0T@ۢP58v,i6MJѬLR&  AŴh9[pˣ42FPtMg@1xMD@8b/ctu-NppO!s" 0H*.RKj%?*=Mrr|U%@=j0$vjP`?߶@*w s r.w5O,04 Bbx.n5~mk!aNњ.n5\bI*4hTK ϋnOԭ$%Yg~W**G\Uq=eɪ'}O^y?<{g~}[Vog92?Vs5|v~Nfxۿz޼{^g[z!߾{wu{}s=g64[x;,*Y-%Kn@ꍪ<G֔0*׬SL<;%Q򳰚Uŏw+w \z[CC/A`(2+V~8t:JV=(ّ[]ͫr'#K ^X'S5,ܷA5xe%9倶M1Ԓ<;1 Y!f8ZΠT([SJE-mgI.?>W9MMXpA`%VKhQ(xUe?njg6fGy]ePP,bFʎ(wh; PAzH(G N^ A82,8@^lA ΢XJ#BJ/n){]AxlȉIn RdT 5]=9 }oCTw9nY\cj+[.4@]P;*17̽Req=8TE7 k~LTXc@ τ>;YSGh*3Ta3ƽKJjiN8A{ ; v_,^`ԾIhk/4zW)V6PEgXEߕl~9?_\}}{3eۏϿ}>+_Ԯ)*!%@J=ؖL< <*FZ,xR4ZSZhr? [U‚& & d 0 c#a ^jh^+}a[Զ(kշ #fgd}Us b:ZeS~-lO(UeRưlF!0ѺF4i97zjn1$%҄ e<50wzEpIPiBGg.&>y3KA} ieDe$O(Ҍ0TR29a,V :%r4gQv0G S]2n&B9MRYOHIN^ '_j)שVzZt@?!T`Yu^M{#cKԀƳǫVuf+nih+;'tdqUbUM2ϦX%phGF ߺ,!mby(2}[{DXOXB(Ⱥx@",U $WI1G:| ;my ż w)-ch@ oCqкkq6 -n{ Ju^=hϡ:qR b`B}!POXǢYz!rV2RKR>\H:i5=ʂ#:]unDrO{ӒZXb0/ZU:Zځ$#_Hoe6S.+c "Q X&KѴ#4 =D9]\r^N!~)js͜CL4ygSJ?_<Ͷ?@NJoyi*uZ "1 2)C6`+@#RQ(Ej,um׼4oEoxL[,R{2`ҵ~Ļ>O^{k/4@EFE zdE]TU5D A;/\r{A5} 3:F_uYWţՔUD >u < (&!>z D%e*֣X*?*iwGdEEbz-Qz$sZLzp #TU1grr mOy{ZSi Pq)!!L=,&Je_/#qWCC9coWNj;^Y== ccb4Vu*KK(b|)#o1Ē8!:`貆UBQbJ"\N$\Wau:iA&mN|qHO5͸z;E5e~朎~iP[~iH_o엎ʾ޽Axu{43 ?_Zϲ˃6WhZI zZ? a{#& mTdVօ ;b͡zIiPwǖ(R#vdAI*'8 {^ 階Nx ړS9L>4X9L/CA鷶 Z5y^Khup .cu|!hB[6-s{ hF3+rR+XP5Sݨ՞eѫV=vEmsOaŧ`jzPXab팖tVpw^Ԉ|b'D-d]#'wv:Tz(Z4[D4 wPFz>x+Dc>[G#VO_~gPc;ᬧϸ_n)BS_\72= 1aR՜`S'b Kݺ7 `k2ԛ=sE3nT +u)b0$2PIC}ҡ:s8aYJPLz:iWTӶ[N*m³_| 3+1P)ir_Ex֤1^ik>@XsO'bZٶqIYYLQp [[1?HKa0^m< [|ޞS1^iFE6} 7j8n|Uvac S-&&{w3QpOyc.;F\ע`ٕ> /Пບϣ98trOwo|owwgRˏtv˦9zr:[KW*gߧOOwgySN?<_޾/O\ϴz~濮ny_>~x7:q(iR^,gqtjcbGH=|Mݔ\|q^qK0=]Qց(jg-crk~-OOC ix~%(nȕaSi9C//xWxG]^춆CV|Z75.u(RXƪT;17c2$9[TIؠB76;+ǩf@g6UJLɬ,D|#HM6`^A Si!mgiZuyi&8o0өN+!S :p5ΟDst`Gf UjHˮL|nd3aH[=OHX0 ll[j 0G]K!,8x^SMCuh2fl[;tkìpKyjT/ijv0v8"es+zu&҆L,T .l06{u1e9 d{6I:1Nv>~f\I@I0eo7?[YTD%|y6Թ~BC}2}[7h1h2l, ؖ[]XJe$=h~H-UGʓ$~B<6S0.~VBAkN{n Lx]2?+y!en ^g<\':,}T:u&PkmnI~`p_w:WEkkPYg/~`[wSsYXn_x9!o8^Mnȶppu\W ksO1:TO.y]spi N*lJAI?2؀Ph|Yx:^']ρRlKrn2u,2Kn`_Hњ_P9\O: C? ͘:lD%{iڲ uQ<_:Y>B, +I" _DVڎ`s[ Pb /Qm(];dnITw\;ޞ[\ ]U*~ Dt{( L\D> \$; :m/cu+,"DB?~W^?^ONO.\|=J _S'O_]?>w?nwx񟏯/)T޽O_{xçǛmoI:{[[ugJǿ\?ç?ǫ?Woݫauz?=<^|_~}sOny)<)m@|8snܿ>??ysGp/{~?~%*ݧ}o?zqMmˋo~^\_p2oo_^훟̢ydDf$uϿ2<_pzr 5x/Y4-ȥMCy#oUx b7RtkuQ}R4_`ORe<|*1b +hr < QK2L@vi*}]+)IH~Bx} ZyO?,Uj>eBՠ:$卤YIiXp4Y.YVG!T8P  O\!(UE ;Ÿz6U6B1wr>*S|!j,P׌W.ȋpU,F- `L ̩Eẇ" Bx1ٸ#-x͂ ZɊu`郏+iM̩L Lymߨz3k4@(5UAyW5\k^QDx#]ta86%(+6AFea6-#+FVVP@IjRp,,:P oES{V嬮-q^*_8|a B7j]<=F+ HEl+kL+Ê4e7c Յy捒b S_KTnSu%X\T&2m$awՈswUv;OsF],x)S{Ƭ1 e[ fWs噑90pDL1l -),s^ל zd2)1Lm*|gvSϷe\zT=C$mWsyAMkAbL7AIo_sQt|4Z̘V[UO. 9Ԟ \?zMtymejCն1JmɂZZ`Ν i ªSKHIfmTP`i*Ic3=&ތCz|7)瘝 ;BCW9N04:8mHMXGNBinKݬ;$lЁ2E7$ A VTb˘{w_MW׏||o|*﾿BLJAhsSۗ/[}|?:3 srst^zɐ_ۯmI<ݧZWBPUlzkGE?x}XS%AҒOSX1^-FR3(*Xv~IOA|:zkm)%JGrnq.ǀ +aU{V0JB&(H(vL\UOD1Rum֕IG"F8jNM+C9˰;n-ljkQZ׶4()4!5%L)) $0&;}+3#繓s(,c ЪNae[ضU ]Wh(edhs2BW KhG5# !O$U)wZ dZ}#N⺦AйʁE[M]+r֦m1ϸyy 2")Θ왦QN.Xv n7Ɔ렑ؼlor6ayHH5}i徨ہ9 '62u4wR3wNhM:Cm4 4 I >-2Vk k0:ko ҆m]ΏM\ƫXޫȭI qA ..a< HZ62T 2,DKֵbu˂yq 1u}ѻ^v:q690.;ٰ6X֝ ~f~-]'ti2H"1;H" mR:5lwmԤۅJjT'IKZ] j<Ⓦ<#G;+\8&*OV.?~O[z08>GՄ@ΣY$Qk,#%ǐY@X@pYZKQizw$GoM, C`N-b2uV ۰EZ&Ln-">+H-Av3mPV-Ո*Wo7osyՉ̵\VGK9ۀV^q6zzbεaHQ0te9JfvőYϺ[5߱ߟ澡AYZ[ !ٗ6BAR\Sba r?Q 4c* 6f̦ƈ.dck]D·C/L]F76;ئ܌p6A1"S  R}6ޞTW`X -ODD1D p c 9+CZ&abS^&/)ڬĜ QMв4ƪ30:;lHYFb%BrѱT S޽}ט(i>Qm G*~~p[mחRơVo6d+=#TLwDm$o&H>X1wɜqژL9٨U,@Puحc WonW,jY."MѦq{hQmmPGe(YN,3r,QnyiZ;VfG~L\COڄy+7܍sEK.ES80~^|N>"JYcjRe`so; }4BGAWks`+x5.tkڊgfܑsα1D*sQX\kݭl[v|4 ?f%)a x x{[aiɑ[&1dex =O]s-j =B\ޯmvht\h۶Һ>>_o!֤|ULsiS/~|prcBQxa9l z,8JkXOe&u1eۓzcuԫׂ[P@"{5 sp9==뀢FzOph!4*ڷnIƞexMN3F:%>pkeVg&i}P`xF1%&tƉPMr!A1esY'ܮnl8VF{du80nծW;|Z20&ccɍ*`(l7 ]`l Al G#.D TJ X@2Gk&`~;hGh}w6 "fAJϕAc=}Kw֕k=~PhT+G}4{a)úk;h8 z(mU8*ߜ}P>Hz 1֟E2 Zڑ5\M|ְ \%g 25"87#sӛŊ7}B>z&'?n3`?ggMa6=NM^0j,[ TuyY+T̕θ0ء-_y<N.KɩKfDR/8ܾI2;A=al2DȈlX1,w9(ה9Rݕ:Uq+f\OB3%*,C8LInvT)P՛gqrPpo=ZpyJ֓ ?^-+䜟:;L:k|ze P攍vcavv^Y<$ 1_#IU:ֵsi's .o6LN<= A&}Y(R[1X>Rg&G &.6,g#Wg+󫓔&=KWw-f*#f8J 4r$jgi$vy&fm&R7aU~ϑa9ONl_lhcM/1HyC2C͚x̐^όɜ7( o€.l4&w+H61,?!{L%J^TҦ/zpA:ᯞY/ʟᯟe#Dr܇4ۿϻ7O}|]S#vk~mv-1 j;cTR#ŹM%6حa͏ZJ[ވjQupP9nDoI%ecw["aTy=|_ ;*"ߗzA0\)o53hF\&I\]@ -t*qGcl  ~1vT{/J3 xc!SoI9XRNET <<:(e]'PzA1~m2x+,@ԄԖ*?f-r <&YAmz3Pu"j q31iQv٧Ry28HuFCj4TNA͡Gxޢ EnڿL"Ev9Xɱ{X >&)#@v4 M51sFhHAg yih%,?"tǨ8!ߪ88W?͗գ.Vc8҈M31o 4G#3˶¿}q?8%NB)'+1] m5~FSO8@ [jJNBEaƕΛ֖VҪ*:a~!#(t<ې)2C{ ]ј ?! F@&k'v0nhXZ3&)e KF"vG%79ɬUCtl=yN "e<f`-H!?77XBw;ǁn-hD7U$F*%5fJѤŖh%5v$4vًA՝O!qcc\~`4d`M>oK ]kTxQCz!Kյn fl'gYj>uڠjfd߶R2`<A%Lx1ԅ.\:OAƪ% eqSfN'=ܑ-$dHzёЖ&}Rh8W Ҍ:&25&a arIʉ<X WdBU:o @&lS0]HHh|Ta"Ń1A'ؚb" ۚ}7ԕqn}1,tr9*gF#ڢte|ZT8T]gʊ* l Lr*8h$C$6QWӮl`M;֊M$cұW2v"U">hR{v5]%*GU̵բq;i-Tv&U[ B~5!ilO07 U yV T&?Ѫ72t) 蝝 NX9+Hƚ7[i54YD `S0'Td`h4}da7:y#Sד6\jTO4qL/- [7l7/l?YhPHevOU'|V&[+N!$nɍNiTvbnc>\Q7xh.ȁSgC)~<)Q=9l:24Z$)-C  y.# XI>Ѩjj+ox๮]vw= S<6ykW%ʧ]o9&)9-0n"`a9ol>U2XD~QNY i~}Пw( At]nY 'B3QZM4$76 ,$Ӯ ݹ*iۻtX#wr&#ib3F ~,9k*\Vv. H 8t9 6'H$ '@]J51QQ3ECwYT&|Ydrޜ/r\$o#$V mJ%3uU BSC(čPpbuLuvʓ2 ~`*'V)s6i?$i{J|}Ȉꙴ?<Oq'{Owo׫o3>}u|!:lf̟9@E@9Q`ef~].,[٠ϛX1U KX߈ c H,k8*=aV;RXS?u,]P-~ρWZPJg)WZd]C04/ԑ>>dm9{6$ W)0 z% VLCkT3R@e=1%:a3lNmI:n7漺fr6! ;OvWʞbeS{O1?%0❅N#OCuju LAf$(AY.ġ_^32ҞSyxJmS>߉8Βzd0ܪgc*NyEwIӨ%x5[ oUN0i;?c5(:S tl{)=,j5찻ڼQ2F  #l|z*X}B3bQ9/̆OɀBu"YK*\0X%=?%LbӔ[>ty#mB;2ko M3O5 _׼,j .] / q+zaK,A^PݤS}~n(7p t}~SIAw)K9h栃hxs6&jyx i]\3%_.s ПqtyËo Ԧ Rs/Ąu.}ҵiܯ5 xdB}БTtDW2 Ah4ZQn-@d?,um[SfFspZC-J>T.L.\H4!m  7CCҶ8]dJ*q²imT8zLS 4N*1U3\-ia0R]ϬVl,SNN6:mRp[XXcV4%Ks$䏸1yF+#R 59Z4-#ݏ8D A!h-ײ;?4I_H -cawǠ,CYV-AK< C9m+гkcSYFۨQi`2nhQq?KjSY(Rn =H#Bz KH 3Z3Nh݆8< jO"^(ԩcc;G(lzx<ᓓRK%ձΦ&HJx;D9y4R^׹64Ef6jV;65  d~e;>u[Y'(z\D4NϚ)ȓrz\b>:Aǐy;ÎCb Ut*$E^q؈/b2 heеB3Ʋ<4.+NĐdKԶ ˓$tfD꾊AL e/6V4[ >5A -K^nC XG5BW,Ij]$CBLX@UG͟b SogP G4c'mG0{GڊzlAmjS.,}fϸPLSc)CZlbazְemRJ,,'!&&.h BuAA{KJ8TƦk>{t` :IKCh31qn25pehk𵸧G@ioV4y]Yw6 #!0`" df v? ѥ~X % /zTe5@ wj\3سɹɨh3* O?ݛ?0"?_3OFiyW__i/{ BC,}[de8"'9g-dɐ?~*6YdնL{^}!uw,_iO?ޟ!~}Ot!?įo?-vWJ*Mym6g-c{s7-_Φc/޵sp3k:7NߛӌOy?]+CwSt~xoV*r+">?kۆ<pF3tB:V ^ q:u?ܶrM}e(q+3&oj4H_PXX I4ax ZA4pW@شey nZ8=\\^׀T3D,^3cAt@=_xf#REl"/`nJýw^&4No p!$vK0Ё4p ܂&YZPKzAxf,ĪZP˶`u$اUҭTxhjv1z/ ڭV+yeЃz/W:鋢kӧ`-(V-fAKpfu:6`|~׭99vIYYV(L%mYV x8i?0g1nݐ 毛A8oQ:IjVZྠH;_=gӒu-$5>_hb(ַ#ӗVoQ^^2@,2i-n,@VU91T̋L T{Aw/9;nU *תR_L0n>zoOĐüj1_?7fY?7?~ջO~xT_ >|?Ëzz{'ܞ|lO>{y)X^<O^꧟|zݻWo㋾{U:^NM˛w/Ӈsny,\o߾Wooz G|xcM| ~R z#z3۔]ԒtL,]~Cew<P.j=]*Eܭh)@`x W(E7@ܭhsyG =Ύ߆qʖήm\-Nh6i6ӞM' D\:I` +޵MX'@4q;% 80$YYH8PSz7a?"@T>W8X[z BK?yXzx'w έϾ48VO :`[GrƤhZP ?TQj9ѐT9Ԡ Yr*=W%ʷ.:zIbgz [m81Lvcc&eħ bOC% (&s4f Gix02)u֒9&*G\f 3P5>&>@SF9O~GUW@ 8H2w QvZi [弅BSd  b@4DvbبnCnm3T1hן7fJiX-ջލwT8t`PYzjS}L4 q Ÿ0Ձ6PD-JJ "=gQ9rq`.7"QSQV> fw,'sV.{8T'0G|4:@A8̍L}G2HDzCˆ̑Th<' s0H9vCzm#hƟ9G*>7!+Ƹbեfk=䜃V\]8NZb؉?qizU1T:Q$h;h:,S'(<%i Gmx=ݠurL-h@^(BQE'FKv\JRD0f(VG Q;6"|TV]sJ RL(5빦B4WMcoZõ% @upӁߥAz;鹓j&/܉{߾։8A_3cs&&3ibo7 +g,c,1_ZhM$S5s8 vH%ds#P۽$% Ev \Ezv=Au 66*(x=epD#qN5Fܞ f4^XM<p .B$[@7ab2ͥ%sB,JgI +.\pSZgPL::`NFlTN7ʎdrl+*w T=Y24]8cD j@Qr9,e{Y4[;!gg(9NG#.mU&54Lh2TTUl;ո4.乲GAE2ݎwsngCE>˜Qg; Cy2qt|፹o1pVS瘹# >m!qmXqUBݭRX"AtbZjjeOIAΰpZ:L`lޭ5&r5 mhl.9_s덖$7RF0bUrN ӫD━WxT\ aFa1 1k.ֺiM-Z9S.4kK>:iIM5sl֔At?cO vG@XzQoS&sITFڐ[e`b)$SCzJ3RF~ EY,&-5Gpr`2 2GTX0753ʷQ(SZ(F!C9kGjA]:6YkXCN ѱUAXJIi׵DWTgz|0Zz4Y΃7ErZ0`tp>8o ʢ I]oTrNⶭ@[K-lgv;Ox~0oS_+O}P+e`SGiaɾҀ`CqnIt{SBD'M>|׻|,ɟ_^}?HBl<]tUR ߇js[!wߞ~n$ċ?ɯw^Oo^}˟_z߿}g R>˛p~_dzE@L q']:!fP+W\ cvug˸Z7hRsO }D6zeg@ܱ י91(8OmtBgLy 8eTF17AySm&{ڙUfF[Onx Fx௢0J~e[`K4PTsenGP~Q>K{O5#R$ofB\7Kq1:WtNT[[fPX dxkOk8#dd8h,leZ&CD.[7,^n 7D1)*) )Ux[CW6Wi U)wX@h5O!y;.PYN.đۺ 7S*iZMJ"Q7%[]IS[@;GN5e_>$zL R&??twt<x_]ܡQ:_1ͧcl0Xv\a4DhZ\~s}بe/-4Q LhldP3\H1.ԣ,Q=J "S;L`͕RldH#䅱d5hD906=1;/jrF`oۑy=ժ#&q8䴹0qZ!INgx Q?(3%AX^b6u~DT[ۙmlBxGaI>{IԖ*OByTs-H|tُLu”ܝɲWYrb+&M;kbUPGo?` l -&y?)-fCk!+Cݬ[l~(\*he}!y RVZ>`osLw0KHV)]jfK/oEt<<ˮ]vPl7lnWB[$ iT( u`8@*7(ՅCZxP>nx3vk.^!@d7U_Ʃ+O֞'y[|۪;S?S-}?[zux")QҚYOPx|`,ek}d!=eq.¬& vHp{3^9oe [MჍ*2 5VUw 7kkfblJ^l1kvDxdN۟lji+i0U)P9c|FK¦v+iTCI'2n_ 9dgU,Xr$\4^ W03)=ve ^1Ӱ]Eo7JU552n!Oˇn R41r&v^Y6sNYBFiŽRY$[C(MVC<:)>YMw.:梿@e.)^AE0HZy貭mh 솭1[@9q}oU|I4raׅ.ڬ>oJo߾{zԺ} 6: $ɗ1UɺjmѺì-E`x:dJq@h 0gVq]Q% *UKzW%J_J@}7a> 9{.S_%$F@'&-UU0H9&J$w%0 */~-rf1tj$%1' 0{~ሉaDŽ5 IGh]gCJO`m`Rn!b=$"W]#Pks&J1M-$V6~`q3It <\ҭ+rMEګ\-זE#z )*`bI$li@[3 JMIQMdپ͢VLsV{[ptšׂ5I{{JHE" V;8'!HR~$bC"yOm A@+wA77$ղGftEwi!}I)hPI=ybdM#+YhkA(\˔yE3h1YmYbRQXN ՞U YĔKlYiLȻ! 6^D7kg.|ܯ2}m/;$Ӯ`OT R'RJҘ%B.ˆg Fc?*K/bfz S1",gf-'Hfu)Vs'fcsM_LVLbqDUif/*T5N.Ry:2f9 yK<t1Wża81[N1\ vk*k ];H|ܚE8&\t"JwL gQ S೙Uk)Dy_KʾaiڽW}sa6LU gÎ'hL(b1BiKK, YTҜAJ&nBcל qFf ='d_׼ܴl~>k 7 ׬yY\Z%uL/ElcWC~z|_禛`.H7K&3l/v6]]6m[.{.](Zw=K4߉iƾW&ƵÜt&\q}A t?Mw\3KslO{a}evI۸EcoJC9Hel*)hvOe='kVڀbF 9nRrj Z62{qU{aK%v%=ʙwqmE )a͚0¦0Be9@i0lR{VNgtI+ITrM67-iVM kV=FAQ@cq8Kk43 r=2) y2 zEHA{fe=OPs=j)y17mKK#r޶٤ה-N1:= 7z{sUC nnTN{NO";:IpZ5zw~,ms]N"yDSptwQ+}Lx/U= {ٌЪ)YJ!Jb%/W`zI|yp!Z̍E .`nOWjH2mhjK;*uαg'1հ) \*s'G'+} cˉ|n(5qH-t Mn9P[up ٳsn>}Sx Ιr7m@ݺi0n+}7_aA4)\B3mK|#F f+(7 OaŬۙ7E C\8{m4Zmp~] ڀ-<͡Se#F/9C֖cւ%mE:`9f-AVLb<hP6.-"1hn2f:. A205!syCB^o73, `eqxF&1p(í-⾣)r+B׸Z rB\(Nmbx&z#LPib]Wԫw^φr|#~\혇v/[fʻ xȰ_qk &('{l !7㮎t *hp|~^8%' 59Mn^}| FoamkuNNA'NwP嘒6FՒ =SٕܥKy;y`~mqC{ڲJIyW=w*..Eg P7iNæm)Jy4nq.yCY5 XlrEt&|sw4mL -Lcؼ[]bZ~|iR Qêw;SĨ F 5}Qg-j륂H--ܭ2-kوކ uN2uG6{ۜ*ܿKž:Sg/6O`C% Y.tuUSZf%{*o FJ2jFk,WU7*ؔoD[ȹ"K@BbL !sJ_)'!d7.k*53a6 '{yARaūյy!q[WUzC+jC)6%Wz4SaS$iIZ۰TKeʺ{^-McʾTO0]U*` 4[?5mUB?3׿Tם׏o.!Z9DNB,5=F.\`6[.I^Eʥn4DR)ltXh69 2 u^RY(q ^-N0_n{t rj`"vOmVZ E=o3]?̶t,@A"7ʥSK58߅n Oqg{DSuKŤcf?ԿD>{lLڥ]6U}KʷBV\*6$T?ԝwJ|Sg,tLzd: {9Ir nf M !JeCIWZ8M{,'F%t珢5gpOf, v*\k\i nڀi(zBT_uY`zVBu)E JHk~ϾYvӿyf)vG ihGRVMh}1 tźkCF2u{e16^<5n7P,M=rv;[}mKͫ,ݏ,\hm} xceʼnON2_ysk`d$`*5NWU&OkNTe@(YQ+F~!9?7nl5p)H _r;jxtn_ٯTic' ie)h7O74L zZ62ucA6]aSdj|t"=|3 [Ssm veq>ӷiCz3 ,90}ik4Yn՘CbxS2.s aJU@97J 7,aJEHŴ3E6-gƱĝ9kD䚹oQ0g?J.9_,!EŰ'2ݶ\ۜzvtm6۾^OX[h(Y7ĺ]+l{.TC*=/\v Ia  PFU=sR@U=[X ?c"Њ-i\^XݱFC97ZD20kvxi{IvzZbNZӶ~{zZm8wjk:Q0hozLeżI "3F 2&+;rxfîcZ9faixԆ)M)A2j4j7p=f7B7IEV}o*Weڔ?1Ɓ=S4ݝ囖!cJZ@]"`؇6KniĬp_ᦛBc<0zfBtַlAi3WOۮ 0UNp= <\YF;7Q` 'ywz?iBC 3}iu`<5k_ 56`˲4I>D9(R )ǧ9wwuH bS$/n-ξp"{.B\سb]Ϝ/!qR8ci~a i)'hς8Ӯkp]5qvq8dBpgg[qXT|wbԬ3M.J?iN6 ]ay! <ul_AYB=I'V0&%O8a2KE#-`D x@F>?g=.AqV4֦q@VWrpdGȺo ju@4qa:fnp8߆2Jĉ눓iM>Gz_mxݞBFtZx`Wg%S2Zm卄\v>?YDRvU*l@ ٮwt*?dL2i9@z#} >xl<X7FjB4@"+\׉t\`CxsQn5"QE&)CE&^3]gg{R&$8NZE?F ].pFCY _9H7 @h*r*.6Kj 5"Bݲ-B DhTb:U>qQe8cz!)u[ Cw B:.Pk*%0CЍkˣ*:a{uhex^:jIYF KwrF#|W4N xpΈm=#r\ S)л;bp\욖%EFɭFiDRlHؐ@6&_o 6P_>yegjPًtQMtݿ|+p\-Ww7wwww0_#:0u}r_[a_d7___yӇW?~뷯?yww/P/;Zp^s}Û_>忾?yw w\0 á<1 ?^\o`5Џa/_F=,\r#a]a9gZ~p?~w?7pwކy+^OoO޼{7>{ ڗ7*y{Ȧ}<\Ͽ}ۻrUuW^_/||~W.-)K.)K-NF}) x ?|Xg?OX`OIJ3t .+U˵ +؅ j- 6#ц $ xN X0)(ٚ A Ջhޅ/{CJr$41.3ዒڧݻ gǑl4N ^QbTa^&Č`Qx(xb+ \#E_@1Px.FL l-tR} K-] < @,#U]E*a"  +:h X-l=ICDP4}9bDPMQEh hbXs/*Oa'g >BzNەH@\9,I*h9Z1 RckqpwXG,xˇ=^  w@e[$Uܔ ' a'PFkZD`; M`]I#JlIoMJ$8 EN$ӆVx%<ɤ-2U, _$.V#N୆#kǯQEmk̓.4!#/j*-CXC2S(آA1KdQn iYN'jKr*hu;`Aٕh39:DP4j0iXw2@Yo:/BuM I@KW6)tа=CK \=v|U$IiAv^"$Z:jSO>6Cvie[,Kt့wBRdp+H<'¥@O8 s!"WE;U[ djuO%Bu`д-3bjGAy\tXH+% HLUވ^+J E?MZ㑥#_E`B%MZPUĦ#E͕e9'y6/@KG 4h9U>'P f ɟ$(#@_WVLxawD!c] eYD!jiD-TF $"z}ciQmK,>|KюL+8'B!eYJ.Bj(̌I A ]_fPH-@\j0v\uHmVޕ#D"N侊n~REmU0{^%OVIh$6ĬNjG&T'vA~+PIRġM&҅gF# Weî<2ᏺaaxQWC-\^bLɢ( ЀBeI2Ԑ 8Hp$vl~VrKS@\B2I8 6>"QPɅrQ-h zBHt<#u%cDdwʅ("IF4$ `k)> _ܗQ()Å`);Hmzl*,'Q|[3%j;pEZ\$##*qO_8_3Q6Wj~@ŠtIWHYCx~ޕã f% O*DEhH21.7lFE6)NR.Bv#_MV GJ(8pQ$8h Qv%Wk4ZhzUHD>ق$S8%|xńdŀ xŒNeEץ)hEfFETޛŶUbLQCYA{v2 ̍# 05MIsr<9Q&û@=2 eu\XT3 2F.O__Y!mdħͻFݡbdqxHQ+[;/hݑ jx<𕢹6^X%L4 ]MX.Ś2";և4L$vFME#J42E26 TF4" +Nƚ& ڄ(&mmJ$ZTݖ\]akeKQ;#u_-WmhYHe`L>bh?޽_}xݧ??&l͗,~xoÿo[o ɂt,S{XP5KYԂd xe\t GuEˆb x@dp PFFvf4b#1o&FzCe,"֩݋6+Y,/d4!q5J[_p``0d%̑5Q .@>Z|ɸ+ե/h4E}o2=ޥ} 07KaNN!tmҤ,i;p7-3!7y ,`|G!2 DrFa7f)BVW=\} 1եK$Ax~.@_+6@ 0,upx^hK:"ny[*!KWk'ߓR 2KjT lWM"rV3 _)9WW$U_%Oio~dK=$.(uH 3 RJ6D/)"9C!]ݱSBISU B 2#\?O_;t5^Vrb% 5Zf+*OntBPԸJWg"rd ׏fns(f%3Vxhlz4I<&`/ 珉'܏h\t3Ws2`E_؀b`+- O!>cэ fsvSUY~OcE%rx<5*.fU9ڇƼY{l.AE[o\؟|%Am\e,0XU=V T/+;6Du4Ȉ ۦ΢6TũCY mny} $e$_tcEX:8&:bIMgc1XQd-yhȬ3 zszb9&HpN73`*:)~V'PosIMEP.LhA:Ƀ\nG?]!?I_5i/0;V.>zT դZ & bXc ->uh1 z*|Eƀ6,M>t"B1&bHT,Vc:氷 "0!-7$iFa jp(HS΃L#9]0S\&A lmSoŀ+D91EO𔢗b6cS:F i(q=C ʑ sIJ=GJW=Q_"c:O\椴閺=|MAlCXDΰXacLzdFWٜ6Df 20h e c۟NLV`]*܊Y~TMIG}([B ?.)|MkzCʹ a Y[7C9@1Ůܥ͂pM>dWs7dI4bn}pkFbgP1| (]Щ\noNAjcBQP ,h+b{k͵uzj$:3 |PbFU/|4=(䌅: ,I00sy^sxOa ^ZOhASh\ɞ*Tԍ%Pe+e)5#htNm 4/OQ4֩! ՀgiDyq'k͎`*߽$1&i^_XNM\jf7_;ݘXX`B4Y1ʫLjl_a" jk#M@rZlZ@fbT IRIcG E294zĞ di k{ h<1X6Tq6Zꐢ6J8jń` xjp4i?KC$LWӘTъ< Rh E%TF Y~m5E?4r80 55 aϟ49}$#w$bU-*pJV!n"LUX5'=مbPҏ&1 G*ԇHE* PSG4ä79d)HMiB6#ub&G=uF+Y3;!uSPZu;ǐ@Gהuh^*~G7U"9{ 1i1G34I U /*' )uJRVMj','iJHe([s`}ODGUc,r%**Zz`]řu/e{SnRDXCocuî "pUk8'2'G|Ŵͱ<eF~s}ggHn"4gnU3J7*~[ c2ĝ cf؏]{pTK K鄬r>2fB1yF?.cݎ蘇dIr.4"jCZ)7_Rl64KY;urÕ%9 SA_rUŗN$6R~n"t0LP0jL|J?d{Lf>ȤO* Zr7d"gtELE]FP4<>dN&C; sQġO~—T%O>Ya%.[tϢPPivq撁g<ޝRatslz 2cM{,dđ ="Ōu7bOb2)3|Iq2$;) &_Ʌ'/a aΑ4a} 2)_8aVGQOfb]&ʾI2I 6A7:ǘr~)RɍL 3)á;?܇z~έ-LGU+ۗ-//+~\{a1BMa#kS]o_-^B~(6X~z]bO`qU/8]ulM%M8GTk|Z{%yK\ޟy M==ҌXTt3N"QD2mOao55?.Eph l'ya:aiBc?t(\= &󃻐xCἬqWoʨ#fpU|1hTkk1E%F (`zw@ &I6OG HtiGoxy[R-va'Fӓ;kTl<)V]A,2ЭvoD'J)DQȝSq2A,& j7POynW+ 9r"SZ[EUq $aJ|K _5[|"!W!^[=AԖg!f-qF=,)%F[|'܆<؀ G!\02s ၈M\:_lf~JAw6l̯^E_;2HnFfu N!1%#;XFwSx E(Rnf v]r8ݺ&z{es|z|4bF{,m9 _C؀*=1_uY| "zD(SߐFuR@sFj%TQuYK:8gh i#uzfzK_PiCn7F]p0zw_BU|)0L̾iW@6vs URj?YlWdI[zS ֬~Kcjm mkhW8 Gxs=m~d4(kTu>"׍ ך>z 3E%\/pSpTKiH]ѽ"4Mv5X_NT~uކx4>vH3b^68~ws(˲P1 b^H._7BDB!"%"bF 5r/[ݸOE^ldFُgǸO042 ~#]̆sᨩOgp:k!=݃< &>7VjW5n )k ΎjdD|7mmhQvO#$rN, x& 'p뀉aMMh^M+&Ǐ% ͗M+=4x{.{' (nLߔtu9#vbR̅CM;t 5 ˎ,f 7;85D^ʓ婌{. ED}ι)Ro:|d\O3 r+94ıROqشi6glb2=S嵈xj/zLNԹcö.z"C!3[hgF{{J,+8՗6C= fJ) [g bIF|A|EqK|j3K^v2qt9_u"L<铙OY⢏~}}Qf%gr 뉆/c{>1N aԓJy&vD^fO$?䜹fBo@ƧGUɎς8wg Q3(Z8+D䓴4|dDWR0Y@aOQ^f[5L+n,7Մ仓etEdmizݰ݊Iog&mlAɓg⛒U il1_*9d]к2]Nؽ+8=(+*Vx9F-}h'x'5^Й@'wHy^ֶ#Nf|g}Ny8Ty3;GixbOa2nt c윪^jGTD˹'Ny6!y‹Qkd_`I\9wƺ6Ehx_qh̀v]XPX튤E)hFo=z(3q d[sc qo7-Bplbp:U,ϯ?盟>xqK<ۻ~x?@ĐS1Kӛ'w_d=Hߙxۅ 'NDz3:qd8~BE)'P#kO:#*'`.W伈5)ߛs$.E`p {BxXMK3֨CZ@ _T7z7Nhx|%XV>M_7%d/Y&x}.~PleGs}uW(ނ6ׇ ^(&;mI lQ. !˘(%W#*Nz$P w`%cQwW%G#9 VwiIJ@=(|M] TsڜfjȫB6#;m$IxUj izq,Mχ\%' ۇ5j\fH,(ZX;Oc&ײk%TIz<3DQ!.kP4:E TD:F|S뭶^@\:ppH ct*ퟐߴ V< 7< ` VU w2R,U@l|HY13Vk8~er-ruaQrEV 6eq7UAv*!5RdBV˂Cׂ& 8HLL7۸[T_u͓bMۻ~%ܒ Փ&ᓷHKڈHcB%s"[2,z4pzw&+^O>ٯ٣Ҷ5{‰9؅9bu)/j|.j*eLǙ>XsG"f M7SYIJac3'TjkXy>f)!kNbVaE6!S>| [|&eSq4s4TV[<;sF[4Cj p:? N0RBސ,zX!W?M"dXSj̍"iړLdVm'N5kKQtMzuDw3MtSOfNK=ɥRpǞwN{:/—X^5bL{B!\ 8dS2d<PPf%DtylԦ&\{moCI'/M?O`c`ZFagụ. M+Ȗ9XlLץxtN%疦Z @HxHMI.rĄZ-LDudMC-E{,Us E*ثкg/1rLbabp,y/]vH{tU HK?F rh2da3 wx"F}ptxgz~ JҦ(P\6tIo;^0y?%)ɒ$YhlN/T/bk0Oeb"vD&BF9}t/5޸F_|48? \^TaGGAG&,ou ߾r槏_b_)x1FKSy1P[ܞ8VND  !@J P=SAnt*}57u^"u,evH?<^^ڿ.ꩰyi:taz*F 9 a6{x;I0 f&g@6W K;bPVG]b&ZçWJ2+Szm\PRӇP(lUt .FhbG8h![bO]Ɇ8m[FI@M.B;wT6]g PuM|bZ+H'Yl4;prH`>"YU)6>/n!6 D)S\z童l:,Sـa Jr3݉hO4+`=MSQmV'{nt:=l2hf)N7lOZ/ZzхQ\F5VQUJbpt !޴: {j_n6,p2} sF1[m%n C.}*㱫pw/U#Ncn"mG![&ara |yAW^%uc_W,Y.ّUҗ }zLl@B)IU3ʂ2DVukl۴1|-6nsQʍM" {qn Du-@:[I’kc@ұw9yb$&z-k+(EMIl5*oa%9] Y2u /K.'2M B6ʫv.&9ˆuH]YCUjsBՇJs~[^>д[2@OIuV梪.Z5VQ:4M>mElً7䲩) T_˱gx%}.7m9q@aR[9J@{Eva4&JamLzSLzڡHXKKW5> )’Pco?BCQ)]YoG~هŪwfaY mY<G&@I{F@͌ʣ*+--Yluw|Vvʶ!/[ !|m/Se.||+: 3rqPnj߼kxr#6|)qGwL3w\=\=7.aeaw㎱ͧEx~݇=? ݓoSP|:Lz0ͻ~~zO*|r&tsswýnW# {oo>ݼ{W^?iO;9؞ٷwwon{/۷{;wm_@Eʄ*D'|*G9!" ̍˝'1Ҿy5d28 ppL͆k.Jً1f70|7d!}ppt‡x o00$$S0=q4. :F&4 1} @p=Y`= pDA : -ecS)`ϬOO6X$48d|5|H,W@z:"^(1JUk,Yݜ4> Si%QdϠpC 0&<'{m[A$K,^čs\ =QIy,YoQQm@31T'Ed]$ Vե6_;$K 8'<x͞G5r$!`* @+7N`E"<^X $wM0#]P=dJ.l gCRyv0^R6h Kچ"qU.OF=݆hn#óRI:26yYFdn:/k2)!\Z)\9Oo(1$I&1s:ɲRp`DK M|HpZ7h&*LݙE쟵r2yreY@|So?c2~ͲmuYZ}\h蔳Ͽt9ocؽvO7WϏ1t]#o뿥w7޾;_^?s%(L{ɳ~G{GI;_fϾh@ ܣe%X/-v+Ē֟.ڿ4h*@p:3{?Aɟ>X5/UxE5 |Dxϛۧ/ 4(z.BdHsCLj֌d/@ǓK0qr~r6 {vɲlj?n/vnk^_|=aUgtxMAX3 gGʒTn+qSTC٬א IZ?ΕSʐ ӕ)2i ƤB\_ ܘGTσ7bbr1bbCQtKbzj|pUᐻϡj_i''UU$!@hx`ƫ4;YijSmԤ1pI#*OVm $sN!Eː1~Zi) wMsT 6b鹂D(3I{`zƭR5-QeBpdTD1VDLhLȖ) V 't)ĵT_gU^(|p B`Sԇz,6$L[|bE ÌS U Bk(+zӀ9ˋ.).fzd{9XK2]9N=;=|rPA _zsQhL跎#iLsZ9 C!5o,1bbq,b[;|"&۫AہFJk2>+rnou{G&5]!P5&"[0JAʺΠɐ+8$/'M{CIw_jZ1neB3#ESD ZV1}yrD*ͻpѰ2LWvN$505XkC zښLz%Ɣea4&O7giOiud>pa\$@V7! @RbQ0X8z`+Vp rq@. i0 D ꒸TyP(<U >th I=+-]|Y1_X? t{y`]1Vq l]%YXx 8[_f!V4iIXhϱuk p4 "NVNJjaxbMP"emfY\:YZЂ-lyA :D8D|+|V  [u`74,PlyY- ϬsU|tCYRkYC~ kCsPlkL r_.o8r|r( p|>IlПJ LE,:ku &389oB'i)p%2Huo_W&b߬cLºLڒ}'>ar(aMCé*L{+xӄ[nB4d:SnQ߾|{W1@iݚ #*$~|??NӶuj⹷qAʽ}7alD9s5^2:I:TbA:Co2]ߕ]uF97&d4'.8(EM2PAxE8P0Ec ТBJpymZz\a0,"þr%7ObpQ9$iUk3}ȅrl-"6\A!x]fhN _&O rjPΗL! v& 7N{'S394=jUh"4L"K3bCUX*&h t[D8$I7*1m,.e}ytcu!f˜3 C1)f zh`C8wsK#.D}D Q"p'q(P!#ޝ%g$[mdf-lpb 76A\Dh9sb,DFW+-=rĂ_~z=>FAXi茮 6(-l1`""5&x#d*2(xWQH QCo`Fe9\3^?(A܄F`蘂.7* ?<.-S1 M%u$c]&?JVtΖ!SK1F!@ kr#4]r0 iۤR Q*д;:#4i>pd4E]uAemS:utFH0ZCZ #b N]BZ[U \'džpC:*1甼b֍O1={ٲ"hA AwFqà0l:Ӽ!̚&3ݡXN|TQi>e-j3fZ2LYRgEk*֬ ,btοc|bZ>?u|H~*xڴ0 1}CeodZX Eecn{04bf jD ʺլltMZNT6V"Nk+4SD-FLiͣjP 5w&{1 ^r5@خ a#ҝ=BGsWnE9X ͋~ .Lt3O*ixOj<vtM6e۾U:52(7EJ#V.fc7@b$$F3cV(?@jVYۜ1}o5~pRPQ\M8CuMN:=B -k0c<(K-#U0'@ԴށFR ֨%rRbZ'r*@%9 !WS)căîk5ܺLKe;ē.Ⱥ1#-=lX$sޙ4m6 dK3A@i /k̜ůDrCŚÕjPs^L}Y~B9ag-ؔT}E~SH' }.1?^QW .Z&՜ 6gON:0 =vy?iQk[{s75/vnx|YZr4Mɻtd5s:3f1- ?n&o&GbS #ǯMc@ۦeXԽ;Y8j2$,ڲ4эa0/tEdʋYmH[ fez(NݡhWOB)׽j[eQ qTNa/?( qQU/ e0򲲂! ҰgLnʅ :Bt(8uQ;Y gٱha_bX3xKH3zg2(B$N1J ۩qM4^= %QD Sы3&sH+E# VjqdmhPA]c>?5=19c %E$5*|(؅a!1ӑΖ*=k˛!)&";9/S`G`XĔFԀNy}U%tP r&'OE>A ^!t(I&-8p6c%ϕ4 L’rGT/90NrSBgR:g=W#KH@ms!GMCIJ\ gV)[S(PAԝk2XKq0Cg3&qFF'Z5x!>)%KQ%/\0D,|*^蔇@kԅ{  qhot՜3C-ˋ ńQRO "0eyvĝwET'bYf;\ۇ{5 })ׂN=<*~A9Q]BpZK>柷Onwof_uԢ5|? ,¬sry].e4iݐ(07Hu7hNMRƫ" }e*Ja4'gw"M`Tto`jV"D!Waf0ٓY&KG2:|v6Pd C~bӉ(e*J7t_ ls{pfjO/hJ^NŌ2 @FцC3E] Jih~\k\QdVz]7,5NQ4L ir"pMtjfed OI&QdQӷrc80N, лR]лuT{|;aVf7q0l7Un )S%hGS{MO@Vպvdotox,Ռ6~ׁ31 lV)VF#Oh#j [g֝(1{`=adoIeo{n=+M^~V舻:Ep=LI";:+B! '[;zf$lcC,FlBᏜ.]^ Cʘݏ8$';m \M~:DYTnU6E4! ؤav0Չu$ɵ)CþdCRDPDQح` 58q+bl<ׇYJCΚ0 W*Mν+q{:!s2Ύ}>C"Btj*YU Ԫ,KמE!z9 `!gAt5Ց? hBC!+][oǕ~S<{Ua -3b[ɣ@H#@QsN]էd)ĶTOwWչ_]|!QB>Gc9* r\NK U`,}A?J_{g(U"3T8J}?gȃ>>#kR4|'~_P +_P~hU ku e> >A7k¹[~qsB %1ߧ?xqyo{<~rכo>?O/_^~>Ow2(y>/__}S|Cӻ_OW~XEN<۟O_g~|w}ݼ{~?z^Y~x[>xwH;_n_~x~ۿ}޼߾z?{ه|'Ͽ_メ_~?~_>ܾ|qx/|}vgO~?.v|7oώ?~iQGBH?BHҢ$@R ۶!+O>A6_ȳO8RH;>@%(oXA0+{/8oT]^ʱషPK# SPުE4A}/m^2HG>G‹/NXMyq퐃ϼׇs$$@ ;' Yju-AA6}QkQjFӊ'@T-T2)dY@; ӘTa{ ]H*@C;$$ nqFnxhc+F*ΑFC\R;c_@64iJKw_J$!#>|xE^v>]TTj^ot̴#\>q ۳jq$mlVy!m"T 2N8Ā˝oSTrh~D&"4q}3%,쬠]9Fhov /QQopGY#!KE B/p4T$Q`v aKY$:l 9 waJᇲEh@N lkzGѮ@c6AZIN9Jih"YW,(|ҰBP R7u푐z tPm7=j}1(pU,QLHz>SUL(mqj13 N*UOs ulq1vU`̒[4xZ3jGoەaFB9~iMfN H#L?4[ hfsCGb1hر>/:c;׸/(}9=v”ۈ(`a tkKtvlTxl/ 8r ifK]-;0HueR+6@8Шcƣl0p@GfOFZQhzMz, )E Sb) t"zK澁։b]`KD} b rb@phdJ d,S)&od s96R`sl'b *_1 v׎RԲ΋&.5>bh4AŅ.ċFo}ǒ.ddXrC.9etƠ&K*,TS̍6|P->:ջŢP5ۍlHˆ.<VOTV¢40pJmF[]F"y~2Zpӻ?nDW?NKeOw9?ֆmGL{?raѝLwDR,KׁU]G@v(*4OoцDeiMg;6_ׄvwBe7/ȼ X_o)zş1jUXOmrW냷`XO)>2,CPQF*scaMb5+8ZXB5Qtc0;eD& GJծ뙐wO-knxZ$Ā `yD+OJ4hWk5x]($`Ȧ2<3Sd´0Z6ux?dh{Ǝ_7̻'[mgքv_,Phs*!w(4Jz`9 R(.ׇύG=5fQH+^3|My ZJ5n5i,u(Zi!i1oP XtgEU,܁4jNsUiMziWSM aSN7 D\^["B^A"}n$DŽ|=@I24+ZQJ3w]h. `81V.TWr6 fQ(hWfNMLޘ]Y?zQh %e([rYoq/nۅ -UZ1n+FS㜅֫5Ycvx:ğ%3,>麜[ V9?ڿZS[U`xQߍ"$HkWWae9Z+RU@&j-S)(ӀDW VVMKo^Jtam6bjᯔb(vEDyu;w/LǮNߒ"7`39/av5F U1JUlJ76иH$|qE /c5W彏yJ_ ssW:m lF&J6zD kLBt JxE"Y;1B#3԰tP|^Sc^39#0={>V~C$),~9hQX#"$+Td]%-")!jui(`e1DYf[mB+wn #L*+gs 3e͖2TYf[l[,; 1qHMuQNӓy+PHTr"-r H0mU&KO!+BhmKrX{JT"T-W׌Y_x()-o^\mB/0 FIy2ϰmP_~N^v2i-0~Rö9.lD{  mah&:~UՄFF*"]ro}ݤ-nw¸"c GQL%̧񈛔J$ *ϝMS=m ` )J&r:Hj sPzd;6Hڠ_R>6++oUڨ{L}/?֦?kҬ V?, ?Z$H^Cq &܈עڧ8IU+MC,JMrKt̐,1M<"H: d*u /Vtp:Tn˔=,P]֠.-ӋqTRs +p$vK6{Jb J*Wj`ąAܪp2SAw_q ѥMWiQ e9lYfgN?޾WO߿=N|x0%? r{Db9ˬ3#FBzS՘Z-T5wCCܒ |q^H5fTrp0<%gE~xsW:2ࡩI0R=‚^+]l&W3n8!Xzt1+_'T0am}`"ԅ癇 %yB<as51G3g9xH(LXb'm.%`۵,%Xu_T?9rg|tBp*dYx킙y)ͫmG Ğ*sF,^hz&L@(/A&C_gXOKT]a\Hj5I >#k 5wFSP|e؁C]o%=\ADW$ el%U.H:gΊYBQxjyMx5 Um]V ޮU?;C\! Y`rra fj6Rl=X }f,J%A:vi xԞo]pL !zxT4W.fB,Cbh =-iA*C+vegfBN T_68Ն1+j[M"Y҇%" "9= ,EM/Go*lEGxGv I"?sN n_MA$#5Ne msb+kܐMU *a򌋐*ҕ!%+fw2N3,ωSdvvV(ɤo>x^f6BH_ <[BCUJ %ޥI6GS)pwP(6fՂ4Bz.4xF}+UIVV-ˮY-nρp ۻ/ 6=0^C?ON9!tsaB DjnQi7lÒ]TzX4@zP ZhM?#yDJ7/*bl @bvf?p:dty `wP#i60A4e28ءӝ&'P-k66*!)V͓9gnv-GTnmD{Xݱ ɟRT`rй[7$<^ n?rbh^-K$dWqk ̖^yh+'K!;n5,/NJmH ɁVVĊ=j21%v㱚n"ԼAS-tVш_APunqĠ2^t$HI݀ZǷV# rLK#RHKZ1+T!p y|8TA5 -A˜YASe ߞW[)Oʏq<媬i񥶤^ 'L!£TA3N$#=D)͞έ/M/L 9y ^ Un8R3Rgdbj\hX]on HtrZo笈fT|&Svo5On~| KǤd '6g]rH&5Xm;Ht5\뤜\CU@JVdj,d:k10s^WM E3I-[Iդp*$z&!@;O?}D}8WG >sXR0_g.[H'5`a@\ʶr{v[Dz_FJycole*zFvP^à[9%.l<Am(]u6&@m_GY?5+pޯ4VJг;hpQ $r62.W`$o:=3`{$`!< XiKQQ~w$ ,+VI%sqSD5S0~+|Wq1WߟŅ!cg?r8;qFHv?0^Eni*)yި2̉۹=:1wfVh}'gTaL$gjIϣkqb0;;IҞk'a@"Nј蹵!sEliAw;_+djOok['lH(`5Wjn%.=\ as0= R^b%(H1Vs)<+ĉ&497) Zb٦ۓSn҄&&MgP0N*)}#459AOHziԇv6#+6Sp7Epg;1=Y 9mpS `h%)XC %QN*/47!SU{D2Ӫ= J}rAÛ j'Sl ڠ%S9 O&)v4;2͝cY,j00V?ǽ؝Y#X%pnuzd[Q5MI;Ǩ1[P^~" 9](r3Cϊ=*!t9EY0|FZ7c_|s܉Ocnos̈8G}̼L13V48F꽎 ;gX?\)+ϝ,ŀ+K1y2nHhFL#Cdr}R",HI X:_d,Rxt-r^E3.ɱC0ɹwUǺN'^;+.V4<(@oA*gy5|)|Wgd&Fф/A٘*LͬD~S%bfE$wfgBܻɴ6&E$e*Wjo~-,za;L Ul\̼QAFyس> x 40?6\b9KC8 %[(:YE8(>Z̾$$3+V.˪w87 rSIp^N͹dkr0ܶ"Oٴ*G㽩w/LQJ'u+4 n)wll=ȽLX^6Z8WW-vwU$3\xz/>}IOsR?: n<7S|פ<4ME㮽?mz3Jú ba(Gj]A *]g]+,0QLNܑ* @$x WTEף5^@"; GtC9G6[t= "$7QlKw.qGA W +Z+@7!ډ4e`?0Ƌq+aQ2D84Б YC pu˩O`H'1 E`YmF 0AL~j<>DiYVb }AՃ"\B8 Ь1v[R1obR#C;.ŨDΥ\$\ bBCJ]tÒZÔS$-f}].Kfj䢂|ٶ -b0p*vwwL9# h хV#M2u1-PD8 %Ŀ`#`_ 3K|jԁA@`’ w Fjmd2~0{NJ &y(.GK$7^+UH~V!ŢPT3=,;-bmh\x:]SY0 v=( m>={ -rUM n"c3%Qm+b / IEequzUvE|d$sHCgP aWUKH`R+)ԵNQ2Lb=@NQwGR({%T6,Muo[mʊ|#Ы؋eP|}S0.s& |DK ZW}%X _?~3"UdE36CʌGmGX:3u4?cY?hzjhK{ĿxZ5nyEQ;@~O_GGF|X =hq^M7s-¼aSv%=Yv@׏ڇC~nM{<~ЧWӚ"GױnA7w0vAG y a6V?<:.otBv 4Ȟ@-hx0f 4Ct6o G˭bπ |x ҆"+([H_p-e l76ۗ Aȷ:Kpx Ă&\0(D,ز!zZ鬠Alz>,5 &AǴIGWVϦW4wՕ_dUl;`O߻=0h^zpqy|;>>CW^?oWׯO}}W+$gIXf 8tYGސtN KDwrI\QhJ6b Dc ~Ϗ5pח q]r*1]+W/8roR | U\QǚPX緟?|~k|^`pSC@YмŊ w& <%=BD%lEb8aǴ|l.tNNb="0Ё-_ܔݎJ՟7!.sbε*bLᏞPM/k9 [E7FR$m]SPrcQϕR_I *Ui J{ĚlQhEG=31%!R!5ȆVhl#)'yǟl\Ԯ 7$ݳ7v_GLj!brv"7"wMvk)S2>v+E4YnmId%=Ca+bna|jH^m*o Y3ʺ{ \}lKZ\۫PrĕfxMn2 ͧ0)Y2zhfF~BuI58_΀<Acsʚ '"E[s]d#S7ׅ fVըj alPЊo^td)3@VoB3e$Ҏ.W&'h,\9n|3D :Fn{ 5uDeoJJ0AvАso힊[5.Kcl?%<rޓhwTzg\Kx=kdqjs uG We*U\5W H# 5֦ Hsio8}`R`Ref5)i"oI"7i5|43|RHZZfa- RO6z=GnFq֬7wRdt߼E%6Rh{p vĆlG@-W5J {VW= uP!{Ar@fAs,9q !AZi'S2WOD;b`shqtm T#*TЩȌ F!ԤFa&mɜ"[\$-}h,C ybt΂=f%`ɻJhDm\UxNiT8 1w_o5|YT6]`DƱcn+e.~~nLڐmڂz"ҰǏ|/ %j$TDmA/4k+e Bw s@GBvзĚs1b*Ȁ)3="`6bl-1%j=<|pŘ5F\Lf]|w3_w`ۛWK_h+zsܚo*9+X޸.`[|uք6T>mH152}'ʭف'FIԾ҉BٸDS}ņ܌ugrSet3HV&%d ӹ*)H=s %؍j|!BVXVrU^nnp_Tψ 8KsXz;΅_jBW~^"U*}&a[ABNs9He rRd:kDϥ`(}ڐ )nqă '`B(C^u ˭l )ޔ@+[(yX]A҈`jsb)nG|kTE=U7[2+VqR6)}6$Zի;a}k^[k'ʄ 4X1QwoAwhuQo%+G 9.I' ;Ѐ4ai,,Ju$Y|mФ*ofrR]sPr6ͻ7 q,UVCVAA~ފ%mx_jcJӸ +\i-/饪XpuT}& /,KJrGBHwqbS.7+Fi:Fvq*06} BZ%sK |`Tu} sgsOUSz:"& ^} jM!6,@. B7NU77KLCWF'r"z#/ zp؝l3c|k;ƛ`t=8* j@\!HriIr>%28_i $;Qztye<' M JkJ(} VUl)קuPvPaQ S .uB(2ە$9uoU}:U0@+'zۨT8p,}s KZflq.{-V2v '*K *đo; rE )ɽ-3_]E8,3xJ}Pn'FZ}Ak`Ks)y gvuyaB櫋8<] 8z]bKp}/*(hMEH+D{r+qJnjFW[Ux eKk,%-ing 8 v+ve}A;p/Ofej;aK(.몄l|+W^ {iup:'8ucΚ5y .Y*O9ŀGֺ\@)$yyCNsuN7w KOeF]) K9EK$y#]*V%ӠkhISNiq]Kd{—x0k{|n)㪴/~/Ϋ5+E2xCP\{u :*A5gH(hZшmn"'^7v/Lg5g@ $IYAfR 㖖Ko܂Pm*ST\'Ngo55ODmj M%*o eIʹ.n]p k*=3q=v JGWT]4-Qn)Lޚo)"b#*Ih;R$>7Yi~ ![|rrpY b?`_`jN K-ڻV>&,n777/WJ/螯y _Ub($%BDFlTXZݬW]ƸMϙNkH5zT & {MK͛<@9b1Szc>^O/峯f^<.O Lݿ_qx~͟QhNx ,<C-s`3kEQM%$#mK'i\c&#r sA.9GFRmO+,6&[{3%~ugx$qo B=b[x8Pumka$+lj3q(szq!z>լΑ.{PuLhRtA4pLۑ(MS5'n95X50ʟ=tX;뗕Eѕȼ^akFF$֙H& Vj"+8Fފ %6 ^h@=Zl,`#d.-Eq42פ-A^/4/Ȕ(Ajs&f|Svx8w-_8g1u׋@&\-ЍxN<JvwoMqYPPb3~3lmN>OXeIwV$ؾbXc9K*7ib̥: Qb. |OQ|7Ll-t7>e%>(UPEf&{q=_K=mHvj(-bVi) z ;\VޫE7edˈjLO X4BHϺ8pg9R ,y(,ps kqÔ6q\X5'3F^FQW:.){3Zj{%"%N;J6~2Ff3\Wwi7V i8d h,rZes >y\ǻ׹i }}(=\N{'g5 DMk5Q)c/FoBg3ynY3\8 &1n:Qbt x%)qRSZfKA'q <(NQ9۷=uU !xz4סuZS"zē1Se rd*y&c`G'yEәʛ1wt(hN)i>UݡiS#b&;'c<@*$Di-ݤR2͹1FD=m~aHMHgЎ'u5$L ? Ӯ'gt'qt0{zdG$~O^B BrOC7qY$moa8Rw ԬbeU.tqMSA#:lCn_sˤ|Άe(X!/Y\}vY9ݤ'O"$$3iY;{t2ne!L VhmRpӧ韋*]>E8JO,)Û?|C=sWk搵Im;nH+hQvw^ǵ.ɻ7鯰~x~J>KKw&^mP{ū΋(ݧ?wܩγhgy臖FMK̆=8<:rTOJӋ*!!HSFٺ=DCb5ѼA"?{yzf|Xt,S5Zi %RD)/motp$9u3햨x,1"%E6nPE(zą y7ԝ}QI+3nc1;`KK'T;[0tֈf8/p̃]ICÔq**rdhLdS^C̙ͣ)`% Hj |kc9)MR)Li<{8q5t #mH8+>cw 3Rwf;W<ǖʤL_y=-4+W"݌JY\#b?X^ghc㴬9DwU,>3헤bo!fs̴Mn.BHѐY-; yB+ECQB,F[\%=omee'?o;z-W2TD@m(Q-X@ Ь@̫ FSy 7 M9 12cd|A8 \M3]OfT"d"!,rLr^MH_nآ]m&=N+]"\YVd Px!@ FT6Ao\ʡ̓wLiDQZtڐV@~vfUCh"BŪ+qk8@>ԂdR Q&L7[wŢ^ E( 3YMakJSDÔfƻƭ 9OMkru# SɑWU؎3q]3Ai5ݬ V[pZU*DI>AzG g1 6/CU4,#Lһ ){5j7 }ҷAEîkIRg?>A?Kp%z.G9<fwb O4rqh&P4qTo_slq44v"{3]ueSef*5(t?1Уd().lFFؼԧsJH"6d:':j|r}'˭Ck't2HRZ)Uzgv#M1ާ@9Xj2~|RzO&YyOPiK⿵*!aU4D#,ۖtf\Z9("):/Q: qeYrKT?TYNzGC' EѪb1BGb!9{{>v"118)BE]jL+8md_ɗ@VӘcG;Cp3212hS2k1ZpJv^.GPJkH}W]XâOzSHbU3=#ҔL5v7>DzHn`eq|] gnA)[k $:스1B[\IB,t`DBFhM5^/ɻ.DIY"M)B\0q3ݜ蓣 Ё(NtD+.aW/Պ tD1o *'oz:yۤhҽ7'aioZɡ'fXa*%L k~L(seչỴ_ 7Paљʡuh=DZpD"+Y53rqβriZ 6ޜoM)1?E&gxbލe Y28ml+ wam%09ljg֮I@x36N."D>NC=\dMfG76KVk>5 w"tN~(_HZlP[L 7Gvo@2w.O44)yb%K痉̲ jv;L5;c jtKYp($l6[ O53r7;PgI6AHrSsUA ;r: ZȆ\ə^Im\adxǃ;&y)M榕sIR,jkPs AYG;;4aťBC0}[Ǒ>{f0(ʀmRcEZ 7㋼UMwU$eiSU/٦ZG攴{{KMYsr}Z+׮מ7GޠNn>?`-ߠFU8w·FFmݠ7_)%Xۊբ_nVwxP䷏XE&:^Xz#a\St7=x{C[bAx$7C4-ZcPny[MLv!){hWC?}ZR72 -+uJ&:iQtkvQ>eJvcF^l K?f^po𺑞ǚ=9)]sCC{BA]Ҋ5`!]m)a2c dEE]*u;E@pΤa:9S0ɡL~8,(YkkVJsh"/E mGɝHH͜&vMIK#HTގDEw%=}%Ѧb?oPnڱ)3%IFU{h)"YM UՏYmd hCԧC#)e<:* &{3жn* nx¢,~5S %qVII<㋗o_}UٓϞw}vs,_ǿ?}{w^|/|ۛO嫛J}{s?|{/گ߿:g_ܿ?7~1zs{OX% {տ>O_OwϿ_{囼ҷ>[Z7߾}oOe3|u͋~ww򇯟>|s>A?~Oo?~}Eٳ?|eU߷/vۧ??oy~|/B WWJB=*a$hb0w& ^AdoM n3@b /s!Tv֤F"j@ϝ.=S˲džԔSz=cp87`.fԝ)8FxHOKi$xϙ|.YQ)m!6( eB˚fρ4o $ᩏ,̱ZZJ5z1e: ~4U z:[na[XMFr5t & yy䍲kf DgKldjK`t"+7%'=6x8 伐ky)ۅl&K<=;`&l-)r=}C"$ P",p,61㟓tyZu$V0M{AR[zRX<.ȻT#L#F\HNxigv dc5 6 -Lٮu 金玁|*)rrFE+NAt&~)&$ ݋1vZ g \2gDZ``Y\̄0XᦥUp'Ecq" 02Ht`w-[V(9rHu*Ѐ}?&uG0yUȒ7i+<5v"9GP ia<If`#) `:!x #fJ-z31vUĵ$-#@H2')bEÿ /]N2 eVyY! ;Ob mM6Z̀=IJ"QCJ$ H` /D>dF|jս`N"ײaXh -/%R} 稛ES@w22O2W' 9 cJTI7WZHCN-G3McP% KDvkӯ]jHqEud`umS]1$;FˎO%kN^LE!dI6pguqBWG[vu3nʊmHNsfJ@q ]+)_J50v,&dtB kco^*8:gj?q4EM}FZr%2_"A#FJ8I-amW&B?RS6˯X(h¸R~ÜsEkMf#a?\g8'†;Pq݆bʶOH9='aL>*2I<2Fl+ n#MrH{͕s !aӴ#VjkArI4LIJE=e:o8 - ?/LwJŷ[d-T\ Fپ&B̉+HIT6++E3iղ,)G{Tq~J޷MJQ$N3' W I,L^hDd$P$t=t>&iRYJDZ;iC20D+ϧ\J'+RB!tt[YwHJdb*t1}gSdU4wW%I*+@Z*a\%<׬2V5P82 v0g0MJ^W}woݿZ^b?VBSU rBQWUKܫA$EM?{r=lσ v@/L}6h +qz'7{9Kn}z T*EOpԧ9,޲zUWb$Z*f6Uls ^\-9Tpna Vڤ&l(F,zKl ;t+cإ ֠!dr) ]"GP:26ʯd M,9HÉ^5A҈|FB0$u1&3 MiՋ3&rbWIs(ivJaCF6;9̵/6&:I*8e ~1H^-EZ5\0͈}<4 Nmz##)] 5^\s} ´V6=Wɮ nzsr" 4Q[~@sx/K" ɞn."Y{Vi 7rRWg')F8%MD'SƭrK.3,M ŶKaߘyN|ĞlP5^<*aOVZICi!ldcD1fn$ 7J4CEq0۠ o8cGꮴ)Zc=+c&fC3`%b$u휧[]MvfvRr&=]q{Yqq2(cwSR~G=S=.80MxXKZŵ87Re^=/5 +8 sHےI--eib!Z$Z. dU9e('”i։k?mɦR lXvnRUјӺ ӹ(]bo֕;& }=C$Ef3N{tԍ{<LJ#tJNHQladLk+.'dU~񫔆 Ex߱$vj6@fTaJp١49hYQZs:_k ڇ_) mF|™q,<"&C:H*5!W->9#ot?]cLe S%&nnOսWg˼ EBw9: zvGT$naFa,O *~jO50Do!$eL_g &!O=`q =Z ngr>riλ&Ǵr8{ٶZqAczOBDlDJm& J{ z$&gl Nۣipi#V(9"qڕh8bhP+;7ώpbIϔD{zd'Z#ݭa2g\.+HR撙/HMdPO.uYmh3*Kvl0rG%z!;$ֹ/sHcF˒v!ze0uG kfԧˈZ!`USFh[4?]WJ9{P]q!C{Aه!+P{8]۸`-8Ȝifv5>Yfܯԫs5hyF гivvv,3Nz(E]AhPATjjx(HyN=y$7'gٓn&_rC<[Ul+)ޔl˟n~|Ϗ5w߽]W/>OϾGl;q;lm}ͧ?=ɵ>Vt4N׼Wz/~?~|囻gU!+2=eW#ߗ=X2 (dBɟGfLSU)D(Y,ȬmҬؗǘՙ; G@MY7@#rl~bVN߂,bs5As{J~' OɷP;\Mi10o@%dtzD 'gI [xanJ3镖Z߹.RRYd n eB/j D0p/p_Vr>~ǯY}뒺O}*$nA~Ry33#asa #簹-N gZ FIeNlFLS-PCfyFbܠ3yBl͋72U &X,a5a?A "p iu]TTƓKۇ̠MB,t;Y#+6}f<|B1Y~ qRz=LdעgreHt#w^k="q |IKE/)[o:%5zJƞQm)1LL!xS3Bkcs\z[487Q[*p)\U0(qZLX1=rdXdm3쐺hr2BbG(HaD ,Ҧ ݝuL-v U{1ю XH*MX_m<8QTh₍*&}?$h뗚紮\E#O]+Y}mMUn3J!"/b0 DDJy2}S ˘&|J+yC$-kR(dMAVt l{frhNHEl2mZ,!+cHIҥgn֞e]1zjRH !YfpiΕqGvGo[ڮR";y T.ooЌTîeYյ.;'.FhZsM[Ch2|J]mfԌ:0DyK?EHrH^M9꒴$X B!USUv$ ) Q&ijjʄKiL0d$fOa9d"HdPp=x7(1"IRb yb)nzJ'.Q,G?L^pD%m]Er5S&POM-ܣNj"ń^+2vYQ* ϲG+sFhpK'WlBf JF *}DtK3*uӻEZ7x6<\&u$PDMh`sX.WŸ^`,Ɏ 0Sz)\Ŕn%~#e @poT(ݠی+PH4PUj(8kȅ`٪Eb;==%SR3 ,]2_A31U ܪH ArrjT06!\(qh\XZUucS=2螐BnT4jԊBI)#!7TdQPߋD#Rg9 Ha ͡ˏM!ڪE(RT@×/gvqKV1K O(FĪ[}ūߪAf.MPMi3jgVqR V,:^ u:1je3'@Jibc}H5VXYn hh0){h+$/u. !Mr֗WkflXTu7[k*׎ڪ5\eoq 5 `5rX7·T9= ڑU:}$igHq{JlEHcVl# 0Tr+Ufk/ڜ0?-cEA-{ J*e7m¡M71q>kd0kʨЖZ}T^˪g,l?y3XH7f[RQYIf-޼.{W9I&I  78Xqyk'"{ Ȟ .$Lpo1Bc,- qN \**ٓ1!hK3$<n/'ş&P T?]ʌΠP'C~ ~]5 dil](GR\$ZW9h$??X ʵ5BBj ׺'f{Z{(Rz}B2y A6B5(v% uvSAZҙM&i;޼ qI=|P[e\7XG)-o+`97w ^v )֏՛Ƕ5!h;J5\_ۂtՋMY=x;xkiW7he5&3ʄu2ĝ8GlM] i(оy왝|Hz0v+.cߎrpb9b~^s;[vy,(06.a1sn.ˍCbXk\7LIo\6kIY+ GVH-ꍨ/t8zl}Qjl+ݜ('`l..&v[=Y&mz๺@vawPb`otg-F1;8m8Q!a |:eMQו6˪ׅ\%jgjԌ)&\MDr7ǜc( =} "W q//1l-no8txI46m;bI;undMʂe[vW S4T#VnYji0||D*l$E_+Ut-mr#0֗kt}<_zoX0ݱU1r=t@M?6uӃtPf{97'KS9~%A HmK1"W8ާ]<`xƒ 6)~\|.Z&'OpJIOU}8 5 ttOw.j-;nPLb|jB(쁗F? G{XqP#qԾŭ&HZNiyZuPxdW˴}27MT†Yv~|2ێ Z2*mۚ0eQ̪6Hp}>i575{kHOnA}g%aG8r荪[9xLP׎mQsŬm,:QR,4k sKR eI`hg(Lե/Ӷ1i@GjplFja]m=CVNjk\.pֲ -'wk貾Zp{`jH9>29G ٝMcdkZ`r'tnvW3Еx NdM蓰2]>A!Ɖ1OܸA{b3Բîm@t|cČq[2ئgU <[?l}ɹۋu$cNz2?jƀXSP&.pYNjW$]plR6MLti|ދ\}yB\YIƋAV4Q^ً̞>8pmz*e'U Qm@;ﵚ*{= {]"AFבhW/UpqރOcû㋗X4vN/__;pGGԴ&Z8#~\%BJK ¦t\{5YRj jvȫ5Wh^ZYہb}3t#;F|@%npwm|m3rwA.vWM!f'LTe ZOKҁ>s'r5NNA+N vt|75m;dxl#2qĹ;ϵCu^~6B?4E1NTPQ$LXr jRQm&Ov"3ʴ0?*K<{Դ*%_RQ'[ױ8^vM>qG'V}7|bZ粒ꘖ GkowS:zNª3 +Vⰾ(czyǫE8j SCjNazЀa .଱ z}8zν[z>Žq2a6B*#s](S(=Iy;0cV@sP6lG>JŜs|Kz(Qhs0^xsKNGWֱlk]ey]݂ ŸmkH ;'Sql,pYjJQVTE/~VmDr7ws8WlkT^< 7kmQNVG\.W {.h$}8F١ lR!Ϫ&ڝ~[v2ߡSW}T+25wI[|BKwCsi#<:7^&a-sjC]8ȩcG4Q X6N%C9Fk0r c:'~<=wOq|VC_=R*1oGAu0!`) \~Ee 1,M~xő?E+AjؼѶV˚h:(γa[b@@>Il^pIzj&IvIHQ}ӻݵϟG}|Q[:=c;|ʿzC &,b?~ӸE.x Z{ %ue ;c{ǎ[! p ^u +%BJs/u:@n^%j7m5AwKf F.Sy{`ӆ|xb[U +/8J'&5OR}tK];2Wvw4ٽ(WZ\+MOn [v2k~GAy]QP?vDj}C-ˈ6VYy: @T0\ڡRW,`:"w18w}$RANԼce~5ggBC1}Yoǵdb08> ؔ!1d?UrSMlMRUgkmhB_]{q-}:_p-}}A}pnR&0TV.x/w gu/}7Yn}Zkefa?v7>S :iҟgi*o׺> XlN˿j᫡.]GX6_5~5]KﳁNt(Z\q>u~Jz2g-ܗ dwkMKL p7]-pʊT񶄻ym \m6LYɼce&ueg)8tNd61ja&8ouێK'5X`"'X 7bP9]/99ǂ+`nMtY)gӝZN5!hU4ƈJ(wv7f|~vI 4 K~Om/^߮oH|﮿˿]wy_E;Ƒ@*d@өKg3U=˲*OR~ ^!8\iY}tD ‚g%?˚&=@S4>{啋iҊ`}2;=QfwW_6 HiPK`J=5iI/)a=< A(+pqI7ٳƥ/"ZH$EdE0BMBh+T:Un!Gު`nC;UecZRGK~A5@|AHݢV僻2ƥCPCbW9@N*J-@O۷fVC5(sH 1dc͢foЩ1 `jlڱF)(&I9"GZx+Tv(8XK`'\pݯ!Uȉ$tנtϝ1+<7MTզh&v$ N]rmO75U.0?P-Xa0H䑂B LB7`&{ * $$U_=8Ҧ [`}N%]7c#'N@csоH%s}Eԁ nSsrNdNߏ!YK7b} lD9 1Y2L?se8F@\yFnH)E]蓐s|L@& 8igSk&:)WX['#[%!bK$ 䝪c uE6 4@\z<w#惭V50{ /h-hD)_\yu7/nH6=*DO#7>~/O><*1/yN6w~xMxN;z~{UާW߼z_n>OwQ_?}) ?DT~~~ݻǻ1<W_x~{ys><}x_Ҋϼ*<3 & pw?nd| _+BI+e R9 1pY%aA7NB5̔h}ulU;IoҒр$-X㮝aH/+äX U %lɤ'ҺN7%b$!(ފ #IA=E9+´ 81?,I "9 P6#`f^<d~ody&7Y3D*c7)@]B`%W֪lY)mNb[ o2ߠbNTδ{stbQf 6p^=Yߠ}C C[6|OԬJ2ʨ\h!m=Q*ׂ l]tG) ƺ.*mMiMcYK|CJk ۓoBPO\Y A% T 짂g+E}~BhT5t{g02HYuPyFC;#AhϖtS!D!_%< sN(a/`M!ݗ;͆ e'C\UFMD'vGwVkP-DXJ}f,*3,+#u)b@sƋ`e=M)ң%ǠؾS+l1]Dby!RB>cel$#$_ ]@T jh"| !{6 u&XBfBKYÄҥ4RU*  kW>#3ZP3INk H2uUL4[a0L)V拎.jPm[ĕ 倽[U zCbHh"1 l9XLmv+ W%XdM2̌' DbJ,5:q4Q>LI.;s 4.5ek:N12u52OV51dYE~z0mhaͨMLHYѿD2\y2IͲpYQj &^ 5!=ʱ(MeGS _! 1_BԌTFU$1% 1ݿ ɅV3xYޑnyqGүc/mu҉upV>x1tzTwkꪾHG6Q]U>}u h>RF٭+.#zM1SLӓ䖝23+2l  u٦k4[LR@"; yYxYj!k$#3$*./  u%>Wgl\ .*gwQbYѯѲk$l?V[T@J)ݵ14\A7[.\tjWZ*9Ys!cz}5La]V4=W'1"XbP#Ki Gro2F@"A=,) f]dg}1ٹ䴔e썂o]1[3A 4yqȰr]wѓ:MVE#zuM$# rYD;o| %<y 1 >͔!x|kQIQ>뫻tU 7Dd5]"vj,gLxw|~YVSpb1#0J/R^ !~ɤuH|UVHWbIG ŁX47xtk/rR5f\[5U-6N$hp4(W.i-8hiJݿ6=|5"Kڡ~\b Ô qߡg.X]2h-.f"--=br`b%evPm~Ti`r mK>m&T`FqW#4MDLlV pp@YO^ƑHcWJkqbTau?p BvԍwHGM̯XD~#[5%HR!JH@RJ!C0I佰+jj!5oL$9 Zd @LݿL@(Ш[Bگ~wz<ȯ7A~^1z(FgL6C߼ϫzHc'm__?x ;ɹՁ$)w]. Ѧ07{@JNJn ^)]Ijeinށzb-<ƲA1zJ7  i=qSFX3WL]+7%[vf$Ҡ6.lHAER a *=$T<^|,ۼX iT('ijrX0j$=:y~]%4 b R,| Z (}'9H,^Eܺn9[ jVmnK` tEjpGanp/bV:tRuiƪtZDVM}~- 'HrQࡄLF NLb[e7-}: :ˆg+7C2*j w?r 4(lQEs=Qs{o8U:{VT=9/ŹZYNJecJݽ~$@F RdjHu5 mMPmD<Č31XVcPjM$0o[pfSbqx0<Ǡhn\H= ?A?϶UyyT'&^&A燏w/qo>?>mx-~ûo~~xwˇOn6ûtxO m_8An 3`(p6N0 }3l>Ia-p pl"`h~2ƒyTbr6Ab_VPFp<5lP3y> L M(ݸ3ea i8&b,IL;F?hjp:sz6,-c+aF&#@,3>uq~<ݑ&@a9|LYZUՅ){C|0*0Ûhuoo8 pfҋ $0J%mdaBF)J${OCd@O,"IMzp*ׯZZf'M>RY݂*p\فk'SL8;Ctq =F: WCsDLA'ja+RNqc3y2iƂ! d,cA +X%f&0maBΟwW6nh7ј- wCum<@hNgMLiYL K:T`Bu:BۙlkN5_*:`Ykl)G0ҧYM083@wdӚ!zVUf8VL i# q FY76Qx!N`w 2’^]1~"zeIi0=w deK"w>0TpN!t&x(zY_w< QӱB98靺,ҒnB|gDplNJ  6mjk<2Q"͉>,bO8Na#kdvd6;OĂtTfȪnġaA2D5a kB&gz@%0hM`a8{;0T:NEKH?9I>C]04:v*[X2} 40\+Dڙbt(X/Br]h LZkZr*K໱)r{CXmGO;C㖌⎳7崠4Bܹ9/0M;N|`Ka'kǕ΁C^ޫ?OլȰ[ mͣ}^דK@REmn/\l#RKYI4'F¸ޝk({S ð!,Ы35=e8Q[20',}|)@bP"NDN[j ZDa4rZV&7Ɔ<`ŰsD2P5]ZrX{/0aYlG⍬TO]11hdc G$~䄂!bBf QX0Y]pS;C=[zy(yF2 e v>ǂE: ='WRzI Փ2(I~̪T2*Z:Ͳ{^+ec_>FM8 [*Pv-9/r;ZWfDL5,fJ8DǏ:ƞ!2IRcB<@b?6VXxWm.# Jaa[m`ICɽFpv=G->;D1]2,\b`RU.6݆U3jɘnil=iu$vSLYޫ!+[IHa\?O79{)SSeoY,{ʯVթM#I,_V;ee%%W-M!b 8 [-&@X<fŬ%,H ͪ du+=bb`|*0bjVgJ=]v5ӫ!0`ʤ~3TbW˾Yuky/WX/+ӥ0aʵ6W6S38V6՞kiA ƅV6C$cH\鶴iCLuϮ62l8Z]x? vӒWG@ 8@#sa.Ió k‹ܼyV mn?zl?M+t oVwӽw1z6k%I@/$VI^.{yc,2%ɏ;-05eL=2x>uAU'Sig)gUKyQV'g[xV`hquC5 >57wS$vA;͢.*0Zje,Kqj62QlL%p>ƛp'9!H%yTЌP>lY 9;w<~im9xRZL)+⬚dbe\6ؚ[5Cmnpj\ӛ@"lE3W'DT*lŨˤ4/kBiP9SVYv8.%ӏ87%5aT >5@Bm<=ڪ|l 6ZR> #urdQsc$Y{tCk*b5ToI{vvj<+2F>:z  ]Nժ35Ǒ7m|`lvIh\P퉇 ڝ}.f0MI(:*vR=Kr%z~nHvnST,Jìci3gHLO&yB!+֜a`a9M-4˸`d+7esdǓJ\Ё=oO-АCc"; yRК6ert%iQ.Av& =6!Aq_R\jB"geZ[Ӄ f3].SӿAsǤ̘7"LWI#npZ0~̿7ȇ [,Jb21y IZe$Iwڼhr^Qo i&]JWJ6|х}9]XBW:g#(c:X KfF&) bz6^tB>IOvpWgQ?`."Cۨq 3B_)j>| o/veGjJ3!0I|-z{# HYxFRAO To:)yP_rst{}>< ޙhp%yn%{nc2ŵg%e;0dsF:4v!/2ݑ4z[H$}v1I <9_EĂ Ҵׁ/gWj 51GR9;YmKJ.ёѡ&jV30W:W)bj,B[9TVE kDC}(R٩9Mf(@"3L6q5*+Rm(@z4$U`,SX$,f޻:PBCOz35A؆:}fc%1g̭ ղ/޲jF`أͤlDZÔ 3ۉҹ(uiY"w! FK)Hpj% Kl!g*",ْEi[ZǼ]B 4^Q}3Z*ΕW8 9*,ݔRW{h7B38t}ަ`޲(1W2< LXlA D.#Ȋ,[mbTu G#JeL;0=a9ZćU,74׺.a++ZE>WwW:r(j߽wCuTjTؐ](Ȣ}RɃT+z s ϜGДRV]tqd^JH ;C "ebqʦ1 O* F`p:SUL&ӵ+)$v}=S{v]'rikrF_(lո]O)1UzDW%P$G>&tI(Jn6f]D*x& T|."84 9TXBq&XQ(cm̞Q YMx!@h. g*e]FS=5~TY= u2<@19c=*H w`L$jckKȺ+/Pk:vNrK]v~*9<$+V'E4 VhUt;|qu`GcgxY~+ҏz|c5oy'S8e.( ̽&9L673پyx{==ٌShO?k#VsmKꫧC}MtY1|zd鵽}}kRZ0ªO^g+C!ks~b9i`rcjb.!~R;Z )5k1}(a߁} nNmbߡ>r%^p]V\nnU\Jdn M{Sm=E^ -F :_`x}c&$e-pgIqrB1>nǞ!qG-v"jGZ9 W]jSƐ$mu)q]M[ s9W%ЕLUi0k:"(G K]8SdWe a-Ά8l =jkP.`wjpPLmXWv-pfvakõDrK S3.΃#z_ 8}i0[-FaWxE!ЅH3EV=u눽& MIҜNsimq7|] ,wk,^ә0Q* Bglx ׃Ŋ E"Ez2Sx-s 9-]yRBG-Ն-քUȞ- a kIfE}0:Y1p-ȉ|~2qYd:'̗i9[ qL8]RK6~l)\j(Oґh))_nr1zyH75)%Ҳjìnztj=Ġs!݇ZJkH[ĠQĠz >vhq[=QudDkr8poߌ}akgK9[;761İ۠g(eJ.1!8TjhעPb@v LFzf6;tA>r0'SdC: h9@_4 hxCU\t.CۋO\N3BCj*]]o7}`sov 4H쌣yȆd,v{3Ikn:Nsq4O(Ùx*ߋ'G3p/զNxUxSu:5u>~vv&nj .|_tp]_'sp?\={ƑF~Q~\': xwSu^aohY]gayYäF<},~3ԙf+Y0qVW~x0͢ dLYldhU\fp(T~oCpɳ2s}Ly0c:R~S kxf~Zd/6X6l lI*qVz HIFVT#+ fEeEhf{u84ÀgA,beL$|=Qkxtŝ\|Z4{Xv=`9ςTͭn[vQn-զ"J#0.ΟY¼;hQQ֗Sl6a ,zmR*ᛉjOR{Z\Es0\U2@ƨ`sԏ=܂F-ת4ׁ< O eA0p. 0>h > \)K~0MÛ}YF6l*Z*f+-AE5U9\$P1aRk6 &B i8MqEyWa[?4Ԭ/0 p9MnEW juJM,aKh}g5DQt~_TR72AAkmqV\*l<*g ZWϰsF-r5[yu2~P6v8{k,y|BSIw.CkA*+ ަXQ@'w$$`eG1'7lA,,l ØU)L{-)"˵^)*[801U`:8NRj|x?hu|NCl4hW M{n2 Y5~- 4Z>U+|^q! "mHHm0"ڪUq7uԕmKO X|" C& ct&[~q^cu& ,uۢˡ[':̲Da2͍ٞMLq71u4Mnq$3ܾ߮=SR?ًߟ-}#ϗo^?\/>A>o?^n>~ړ¯z?=<-r꧿yaOw/?^]A߄^qsC!F|cnͻ߮7w_~#Oȯ_^?]ng/.Y㳟߽~㋿ׯ >0q hQ?H8}U؜q-4Vr |aAo?K81doOfIj/D_LOzUy9kEXg,Vm@1R/DO{[z*^&5uz9/a ] sTbX)0 0C~%eBz%RPeDc.glȈ8dU ʸlk,SqR _P :Kj$?;9!!QIΛ12e$rD`f_4D|m~Z/^>ao_VL,I!/ЅoLJmlAeS\8$BE8^Vtkm\}%:ł\sKdb 1FJy "xVdnd%y#HgI/ج, Ia/a0t1^{}lŲ-üRIALuibqKfe!O'IS QWBNӞJ*> |!,)_pie|D&[ шB;uqZ8YK 6dL*_H’!5%< d%ݠ35y7qǙiìX\̢ 7^ڂXl >]4GTBvw[ 5$ߛT'u̞m}N1KT,#PфC,@q0}5{R$k+LSr4ndMEzX,dV.<=K}+5^ ALdbB4((d: 7B ʹLFDh*0Xxz>&2X9GQ5iF}bAB,cZ 7 \-s­,%& q4=[5̨nf%ȘBeJ4Y%t%7$E J0MOJafJ4273^$T \H.j }ITIHBu771 &ܲjHƀq*nWʹ#jyObA_+II01uT^d!§\V>HoVCTttcԷ*f@Kvs:EV(i>\Zd!r׵t}ݔ&:ؽ*CJ)݁N67|4k NP3+s΀4&[w^eF\lYT/%@6CSu4F6Je#Qv1y%[2祐ϷwE. {wբb6 k5Ñݰ"+v7$)0o. [jneȁ!LVn#5]'ӵtfZ2╲(,wUr DzK:ir-DAXKTx꺬Uҭ)JfS$&.omO )|dYބG(/V߈H Ig5 N;DJV,dI&%|SN'`Fj*ve%_-v.&L \`RZŽR3uX)ڟ2,ZGr{vaǦo%<ӄ]6WR:wI7JAp+W {Wq=>]Tr t)WZNzOO[ir۰e3ϫ ֤Yk}JVKP-ӰO2d1$G `} ݔN)U6YY)}!_Wy{Ԍ6kA`zZ+n@vx4BUSϤu^.*L+T ?]?YY}dE7|ZL.!WXSS3/ĩJuώXC4.Y";FS~g/LˈLYx<flOُnI=f>|*\)^l*Ϟk4AQ^z*:p%Fv|9KͮUVCExW@XzAQ!w^gb:V?-%rR.;s@KuRSփwd%Eˮ`Wcl;S{ZXS{$INO)0-đ6fÎKn8mR5&bn+scV`F҄bΡ_sH/Y<1^9(JR b(NK̒l,YQ;YPL'j;嬼ZJ2lǹөv(fdQc'3srO=JvjMaN"QPrZxǪ\՞ 2mSP9OyFމ4M-Fp ;LʋBDTe߱JBvke"uPNh-#hQLPMPM[J^yJӬmZ`ȍSu+]PMՋI3iZIk:W\Mmq={ؘi0x"{V'"'lGW5*[Yů\Sv(ݛ BċnQ*|vą\9KMK:FF٪ ͜yE6 K%ʼm~-ja?/ xx3^k=q*@mv :LRTx(T1RDhy Tbv ߧj+[;>og)iskr̮R]U$9`qƼm5}L=e*PPpni> ,$Jy>")yLV] X[D5f|5Uht7b/UE VY V  d`kz4C=Je2$*Ф4XQOQx#Js-1jiw %>-4[ T`$K}GA,e",d}[?NBx>񰂵#3_--wjS;fj|k-rU%-7o>]z6cMNjWnr}pЦ/ׇOvO</._?_^|u嫟.^={/?3ve¡q?ן~w??~7V;KLmݼsJjXHGW\w2h˪ EqJ̀ZZD PƫB/]_JSyG -νT2li _^Fd{)t7٬Q(1dI0w"z,&YH9eKBc)r<2` EҿV*)m3ge 7#GWr16ˤt&%S#y«g?qEAtjgi4j'AK$Li.<ܬնi͓r,ay3`Fyr"K eG3{NX!5S0b6}Bo \tnRzOBl-1$β _̨ (Vy%+S Ey97,9VPAOa#VxG$xpo,| J5H+oN/ $0wAJ1XI~Cמ N-nOˁn/TJb)a&1,Д쒐GI@5 e1~1 Q=3F>-9:سcS1#[pmyd+ʴ9"9cZ#'.KK>^+٘Q< 8(I iУhE| F!25[(?Cl&r!xX:(ΒX.҉8U~TNqoU>9ٗ~tƏuiP@ iJAKG Q"Cs+|c7MAʏH|oh2-0I <^GME&z;+J+KxՕߥzlG(ܮKrLr>VM@UvJN.RMS *H0K!A qBett$Y_AGϚ4poPnиw.#,G{ItۧL_LٔrGX,ɰ&T.ԃ:: qVZgYQ: &HN99j FIG(#JN3H{4?< &&ʻmcGO@+T,o³Og.XkD>L)ᇏ9TMB~G4LxNO_0gHj8oN%kJװ\{!Zsmfg J9mٮai;JRҰӤcN!G4@@Pˤ}GYR#ڲ1V ןbNe$ZSm8'|,wƢvbcѿD0:#?zG+Oh7_%8z!ghp<\G6pk" Xq\POq0|;૳q8ڍr(5$Px'Y(M-`r,ծPtLj[Wձm, 3'ш5(ggQh(mͬ#@h~UA _L٨2& =+p߸9Slc`蛚EuR3e|Ftr1Q10Wrx)y3HއQyEtb`ET eTnoVU: q1QOazlAǣpڇyjy%fE6 ؄DI:k6R娛k 7Ta_67hN?o X!Zzn֣Ah7B vڽ43%39'\u-c;r| B `ni-u S@sSBqtj n?Ǡ74:vO b.OmoTS!WbѼ3)yܡГYQfLgFw`&I9' Xơ'v3ALaB`W9A-9ˎڒa̎Ki{ƏDsi|L'bFL~b t1h $ =?}L1` J5DJ1Ae*0=ShJ{9G<'Ijz@}˂һo_ m9CF t^$#}}*l(V BX6תfXӜi`3P41_.Ν )LqOOv(&?J6hm(ntk,L3rg˼cJiXvR]~FKuJ-gfnS^|kHZ`!g`&Gq`Fc|A)Uz>T< '@ΰKt#I38wt kEA?ʔYu+,]xP۩T95gIؙ1nKIP\3Wңh%13Ei&#LGg+L~fLM*@E!00v8ȱϖ6`wH+sZ3ao0O<`-&J3ɂPĎe k@|4[fV8=bn&^Eփ{U"YmKgT)?4/-<0uZñ~z}.tѹ=K.Zb;pN]&l0S3S4A¡LK&hQ<2oNI[U_LVͲ$#OҢ{Z vD+'59\ =lc-]3Acyѣd, & #/qA+R\\F0v؀p292i﯉ZFec+@vJi!?1"a@փjLgd e?1Tl4#,`g%XJQ.Sb=ʪ9zJmV{nf{JvYY(=1ISmW^3tm]kzarQm%٥yC<+c+1g^E Zib 8*r'9ُw%NWdqAV'krhzuQuY(Dj9݂kM}sjOaK6cwFHHx V]NOOʐ՜B3uP`NM3՞@6Zgśtpwlu&|%U./i9ֻu 1fYcCguQ#+_=D9?Ef<5"LD42xHSO&H)?d*L&K hv;0I.?()yvO$+IxhaspI<gߑ㤦ѷnԏZTڷya~ 2j*@C8"D D4><|F>)GauUϲbD1s"0"$??NQU\D1 2F:2:LtgHx'P7\M"KY0ޛdA%9oabS=xKDc ȴ3JN$;m'^~QـùQ3t  AjP|&dF*ҚKZzۮ^uS4HQ|NUozS3]` 6]aۃජr(bc:NCҮkbN(,#rHWbP-nﳏ߶Lf#^F*~V\n0OyKNiS7Tyde: )$ ڝtvRLao&c})7{"u+ĥv]J94 u}ddkZBZ[B 9>XŃ%XDw"?FvԥԞT? IR"<6nn掚TH!)g}Gug[NP*ÂB(_Ӷ-Muَb"$=/u/HUNRdojJi[|.a" V5K( VIMz\MDD;rmGR,d'7cXYxXRAiatnęASōWT'|ոE;/:W^bKى%cx3uFZkjQmr#)徆 ҈F ٠Qz}{fMH}j3>Ua^5q|>fE@!zfOܩפ,|-uz=7o+=Or~]\|ٗY aޯNuu~n~pn) QIH"?(0x~rMtÞQUwgW. ۪SUEq'e7)jqD1+Y$5n'ǫxQMhe(KgpTB\=ˠs{7s?%xnnBMϑ2no,x?/>‚}),עHFFIjb.{Cl)MnbZK!0ѕGkGK{P]5<@ : tϵ(_<ʍ|1<3~. j`sq Ӂ;3=jH-L?K$B=, !+U{ |@a5$PbpW#~5$,ЬÑt-+,&:4 a°xån D8T$ڳ3fZ3 pJ-@_D&У }>Q¿po |Io}ˉ%hEVO`Ը+xK4Mo)ID YJAh<|;H y^.ZG`d)Șj=}? `f"NDybZL:&ODTkoYCF >+*e2^7y{R /^^]~{.>O_}PjY_o{x^_w6Kxy~{痛mՇw?D~}y{W|_/V>m^^/?|_~ryÇǻqAǗzݯww?>?\\~*ﻋ//qqoy⯿"UwUD!8#yy W$ X tH$ilP:VDb՗ 3TtbӛmM9+炻Pv|..(fJ )4(՞8TsE:tՠf5Z Ͳ ;`PV;t&tōWWL%sw$w bq֦"_Ef_P ɀ6}<#頺Z`\@'cQ'.mǡ:)iB#WC% |A@4~/  2 Vmf]zl3PapBR~~mzCRD zh6-Ù)6@rgEI$⣗*U[a͙ `H'hVs89]޶R6"596KP\#?I2Z7YV&0x#0evxYq! /Y&QlD)dwTWcx% F|3$#G!1xk(Ieh`_HjJOc2MdeJsi3DbpsC D6|Z,hiVZ>Ab i$nSEܩFh6*Q!jOI9 gvBD !;k5( #1DMDi(V3ሒ椊ɡ$1t07:\ZXE\<-GeK[ !zes뾛t1*98mpaѫ =(:B/$ <,Q%+ze!0*yӫ.a>' 'Ѩo/o{z{|~7Z9$4݅\I|F(o"0?<x3F`(O~|xxͻۧ??<ᅫQ|"Ş&>+[EѢ%㰙wE;S:x}u $An._k[C ~H_'gudyѬ(BJ(Z˔$W =IZb}*0 $1 qWU97"lwr7.h7Lk0X[=)rerr#B \51].MhO2]pj} Ԃ#tk/4^`.z-w{MHUHh?VB PjdҦI%dhB"R4!WDa ީlT8TrQ`x@(VT}*) *rbNزs3we- ᝮCy8Y_pGװpX&۩A<ʟ.T;ih(.sNҶ&S{h,Z"J^ߚrpֳevkC4D~ᘏ$ _`Q 5T#뱵Bw{TՠQJ!|C<#wc{RhZ8w"#jF@cA@̚)D]sA"/y&kV5O 0۪L$J0@K@#*pGO!AI(Yr{A5UՂЙk6H4 U10ᶮcB>S{#_p!t'9FyBrGyA=y{%+Ekm1`L=fp5bl)[0:!KG,n%hf(jK"{FwqYZ]NRT!S?50jrS贓iXi|)ް<A&5ReTT(/ߏn*OL*rFh gzs:9[UۚmL3[Z84Pj 㩸^9 P ؆4>`9"A38A){V2yŗI9UAQ qA1gfK[U-k !ؐMékvAS-t`2{y s_~:Ms93SUR6 $I. d S 1Q B<RLs^Lχ G<2uĒR zIrR_?0LO'ei8 Ka>y]ڻ!Ev*)X:nk>@z2(t5YH[Bb2@45͐n6FUcVnco(JȬ@cʐ)YrP"0`i%Ǜ$`ppفR!&@|Х e˽!:UI׺&py#[IG9O60tpkȝΈbۢQ'זL|&2y*VϹn["bڃ05|v <('xW :af$0Y$J S;V`p+i*tn`S8TG &=9>]hB9ܔP6%r\lD#-|:8֫О3U[ճ ʪ.?Cv\넪]8񉄗l 4yQ #v30iYccKjѝr &U)[U.& 0gTq"KpTvl-ae7p{]jqQYnFJEN d1Nz湊3K)vma\52fW 5fH.Jf(x]фlD&A1-@J.JQ o_LUL)Ƨ=ދ[U83PPFZj{^.kA8Xe~Iɣ*m(HKfnKwR{k^2b}Gk|'$ׄmj*L&&Glks1 VEњ;=Aܦbc%}S "2sqidX= Y'2܎]Gu)DIbx*WPɄc]4ݙQ0Z|992Sr/}`SF6'kgK7~诿.oL^C G6p:?@4釨~鍈F97{,:@EwvnB5z?` GP+[ tK@ELٰn\['#3搧~OlF)ۓuktr?0b%&lq:aV6,ɀ!㸙9EKj;(;&XD\&qSos&s4T`˽8uH:GjrlLgHHSMO4 1j{0a+O4ȕ[rma~]dj%YpnډZ60҃aJ?Dt!۪Cy8(6k'mP~{R ٣VȞ;Szmm'6wEa̓BjAu@Π=wdS7>,9ޔ/lVYW/#? hCzaId&h7 -U YEMCH"% 741gӛhHyj)3)WN%Zc,˥J P4*a,[㢝GNv$m@ pr4 '7g.:GӐbz5#QС}6u^K;b-=vQWd;kLIۂZ%&,IVz:I9/zrO=± ?\͊^aeqO4I(cL8T 굞L\ZÄqi 2buR?3b#}WϭۚtӹK~~D\F=&O~ars%Kɳ&,iT^$6X&8wBz mi>,Vv! oehskAD-$('|e04HΡbmo SP4Cp t7&K}*j |^_grkR_+&Hcܫ$[='+ tlc\y5*M1k _/G 4ZNT.ђۦwی+믌],^ JS\i+|=ų([؃.MzR&(P?cR%n]P@öJ[m*(r2uqW^=||_oOmr^xmW˅ZNJ}+Nor EO.]1%~󍶲a9\w_?޽w6⫍̥w{+Xoė}y'7!`FbB[q5:r?mO_1MQ7Bm-i11B ?% "Na C WSLCua;ՒޝD6)Pi$ Q6W5{0%?&N .(k7'!B:4yR >%0h0h9Ayqڎ/IA!8R% J]g]{Wcyvk. {5ÖiW"=a!CR*XCH\! B{H 5jrކT!˘DC ^we{eCbCZIP2}L┪S{W}cJy"$]m *a| \  Ty'lL^Y|ȩđ#hL_Ԯ!=j ݃HmCKyבWtDN^b6W Q3` E֜y*"*J*AJcty *Ѷq-$B&Ƣ#"C(ĵK2t]J]'FbTQJɔ_*J%^PU,3aR3zVDsLzpjA-i _a*(8tWdzQU1U1ͭ͡X*IuGt{Uǖx# M,q23XONHYeb4YWx ¢WeM@6\20晦o\'  {OBڪ6\ 4ITUC T˙׻! FʣBz1,Rw)$Xk^qxڬK C2* TF6KV[hC,H\ 4"86pMYKpފC26%a n|JRA*# -s']L}%e \נ 8D)md !ކSA\6Y/ycu /}CKoM :}uM,5\$T1^r9&OPBܔvSko^nKBo]$S oӾg-CB7 Q)ThJk'6J(6h%#Q4}"T֭ɒ6βHШRXԂvY@Q4}k7Q4'SvqlU#&D?hʼnLE1ZkWp޻n¹$B憝 BvCAbC8NOLvTȾCE H= Mt rYsK8CQ5rCMgW{)dc^[Z9q]e\怒Bt}L\g2ъ(e'cFnJNNyqd2c gjNz.F-$E^oS b*%jUAeJ$oEzH'~'k,M!?PؐАD]t=:jGUvmQaՔ>V@vBe.xM^L "U 0jdEvsy^Y^yL]+ 'ml%O >ʕlcg!aa-b"ST> ]}N?/ _{`j;CH,ޙ?_'&w=]d.`Ш1&wn`켑RzySu+ryOzu{*zɒ qi=yj߹."]?7|GJw <87z`9:뜡]5)gbkSMqW}'%>u鴇(̰]#GĪhIs;YVA:̀V<4蚈h:ar-z))ڋiM3:6LQ˭QTK'896|dh]~nYsZm8&pϮ% -HStK;OWk+v2rt9;vY!hOZsSZH4zd'6O#&2DjXy) D2@ qk3({4Nɲ }Eg@^Yn6kkpȯ @:8x1'1o;5R6Vu=d8,W*uA Ƹo G _%S؃K:t"#`?e[{PlHcwҩ-tt@ֻbDzҼjs@!:j`۪;I_͍1>.u5x<#߯8ߍ)ܡVM fP%~9 "$~]cۮ/gS$6ʨs+уʙ!syusuu} wt\RťS]L\;7MˇǏA)@o={?-Oy移ĦZ`n96%5P/{!X]wZ g6Θji !`TRd602=R=I69i\Vt3 )j0%zdsI=jnbIl̈́r-,99EIB$`:@ȫu-BV%nZՀHק8"C&Q 2X{Jsx}/V,t om"ٜ(X jB ֖T~%n'BC6}YǕ33辌} TSRـl2!va((R֠~Y"D̼<M֒y3#,Y۳N1~qN)zxl3\]:uǔ{)rOduvll376S8q9xO8[reijN򗆻;EWn1g >y|L{51lܥsJ'1䳳v=1qgp9l9Sx>CǞ/ח/=c9r}}^>_=a 6v̥rKST.vL#GU);O:Rb c"{MќLyS|2,E=,PjҸW߫lJ)G$}_xe&VJp5e]$/XvIf"~beme {:|ʅ̈/#3Ybk9rr|,6"AQ49O?+W*sޅ 5̕NUa XIɮC-+ebŖQ*vĖw•6f{r)X^7 ,?2sT0c / %XsIغcNF#!+Ke'RarOS̗LaocVeF,~1UU 8(0uh\  PV&+m/Go|\# #?9m|0Go-!iLĻ& ZfJU&Z3{ɓ\ |aogC=z^nٗ#dj(O)Шl`y%=3; wt$A;A1-ȏ5EjRx8LbRWqR_F*ORH!iKX%+,>@ (Ū42ˎr0)$,f~BƝ+.5r? +ɈH@*.t&BlW`sed^a ȺBj ]75N1\>% ljAH1ҥPnR& jD@O&᛹*vXNbZF'#fX^6W#b_@*2-!yov(BX>G!T,iԉE#@ӟ$@sSuLcխv5ʶD_񖵩jIsNr[ -@@AYUŠl5el& R"ftM7Wh]ӳ,[9 5GS_e: xKͦpQBLgIͮ#ZU*8B7 aG2eoV&2jN3z5Msپ`_ЬԼR2*_Q#Xɡ*yG8Aae_#UGQcGꗎPEEvƈw :+$7ʶdl瞐N,_ 2$d+&󩀃AU? 6-j02_.@_wkC1%KeѬ۴4;%\44A-D뉮Ec{Pmoͤ% \(69JƝ̜bSHҙQUq5: ld!JeP*My!/+*/E 6].,(f LHTNҭ Uìjf,rR8c\ YIeEԼ23:ݤ@^[Ofwەyd*F&|(F1hnPd@ŌpZٶi0c)w|}7Twۛ۷?pSss7<=?~z<^_^tçݽ-K||߽t=,ۇO?*}w'x 3vY 7^gu~dBK |=Ps5>WmЌ<4 gl/fu;<^u]"j5Ҋ5u}%Fe4.B^=3e>Ƚ v|<2#>i-rp+~&Wոɀll^@;ߣcV# 0ғ- KnIk1c914F2Lݐ; X%T]AK0gbQY"cZTep#YdsG~D\sb|SXH ߮qGu,H}iR4cI5c \i^us -5I̕w5vfJZQ|jGܢ KAӴ-1mYH,1<p+vdBTϒ-0ȦМZ#-:}e' $d"mҳ"fz6I< tN*Bd4F.1\FJ0h6KJ҅JyT;aaCq-Sۄ# b0Yb@i6;T;ߣ^pRzAm^DryrvT£k(sx,׺q #BK{l1A 2p"SR8XܑMيɴ pW{(JoQKM9 FQUas=gi"4{^WXEġWSXgѢcq~Y4И\ I&=I?)9cV$ըU o=r6bb8` cT}$鋖.5t'iWON-.ՈG<@OQX^Ix'~U!-͊$ %frna- FwО i*5/Lh\Ej\IqOH" 'jl7+pn}I}/*`;- JDZ,vog8RW*ݓ=q!ޤBvJr ;k1йPXFIc^Bowc@3sPضA1ZR6)#]Yaf$%ejKػqˏ0`2,~i$ZC& C̶ux.~sG!Hoas6ڶ aEl)| 9׳>|EV~h%ҋ߾|p6ʏkeMu|/"+a؉_Vݽy}x|q![ݟ0˗kϋHm^xJDO'Ds\@%`:NpR&9,V7 {jY yPbkíDZdYNFOBݠd0)M_ JZqT-zpⅴK 2e,q8b~&)bK3%c_D@3'n5Tu n{ fwIW걦ch|Ѝ]Sd#q(\)T7DEjZt`TQj?2V?'yR0SznWbBt8<+=+7:f-̾bN:8(r'% =1M$#&(4BU✓ +!#[$3Ej|w(!(sWV~y^ʋvֱP3kS)7Ie^cٝag7[9I.20xX3{堍t͐u5Ҽi7h( ,~ $)O[_tM)[jz%ݱls_kdUդI9qydXe,r&A ]xem)'n\33t:S`T8L R'#$k"/\a,ӈ*qmj'L͸h01۠'@f ^̷J'!슗׻(UkT&Q/dCjA,4m}T\ RF?Э HP#`@rڥPšY3f;_Rl`J* X~w!]#6M K XqEgT:>%˄)iڝYofIc%SOYC`7.I#y!C{zEJJAlFLf` X=`N)Lhf]T9;QHg"WOm-'fNN8FUNXtJ4nE g7 މ&7mn! mɃCを$=C8`;Л( ~n7 6sIZn &%9򑠤; i$+ KTs#Ȥc*JtlP/ɣ#trer< L]$cF|Hz5cc-Y3 W8Z7]Tzz I1as;S@L[N ًg/no˟/n ~rs{sK?_WL02}WP!_3z.^/^-]PߗwǗF*'O!_ő+_ѿػP,/_{%嗜B p[drih s#+[Q v_ `FMCiMȰTKz!zp>VؤQSv׭WbXm5rL-8B de)n\K,=!=@۝6<%fl\iL4-A[(5@NDAJ󸝰ӄc-0~+ZEJe.ઓ3NŰ7@dp/O8Wh!Ss+34!r {Wb ذжk q/͝Uɷ"ƀײCv$ ͝$u]}&NP]0)Z7Cdɷх|j*2=sY3-O4g ŋc'`|mU ndbc~ e3]-b-Wwh؂Wq{%AT|'Ld)ڠxk,6@o"ZQ\PT;T.@?I nf+^b-fU1 z"9wNF{a|Uh  )1,Z[)Pk07%:QK:&!8_[] 5Vηzj  GQ&E{bÙ|6ޒOق"vU\Gj8P/Q|+_eϸ7AUvMC:ҫ;Cy DS+{>䷱![w?#H ^~`;@lrڌ !ihlk6TjZ3rHƉWBX^B/46}ޠmZhWf0L%׏ kh/Qշh~ǎQlXSٕ\X.S@)4Znje %@w8vKHw+,0lC,QXRCw$ ݩԞ "Uʰ(E(V Z)˨vfk];,~(\ ؅X!{}en.ԍM}JҚHC)\q~\I#3═/*+a?*ږC'n˹^ C/5 nΚI᱐ KbIrWX*q'ב]el hlN00wgV2eH@I0 !i}2C}ͧ*cEm-8_RxRudW7j~C}`j y& U ;|`4$ɞcc4wd]Ka&zKP-;!Vq4z`RAV<7W]ޠܯ:_ߓ'uXg[qA Fvf &AsuRBY߰y'UvlʚTŹ}Pr:$v;q]uhea}p2>NQx6M#4k( %A]0Up; ڎjZ3=%^o|̰截cl}6L&iByA IK^!]Mq .gbcF8#xKsGl>)uFx #Nyʌج/Β1"K )\Ygtˌ=%ͫTvuTlU'ycʆS4A.\h]t먋2f5-%ns#`{pUs}k:Swjk Cuj3ҩQF\ε[,֕waX^.Xg:Ě }jft$$z^J$eǣAqj7HS>}O@i5 7`h7Wö2f2C']s@ݝuXa>9e(Tj7IIj-̬Iɪ,=ќdȼV>mI[NIx>Z{H;\PlMudDfHZjB0P3'FR}LWk=cc'c䇂cx]bs^i Хd31|abd3} ݯw̢ (ҊR”$UJ3;ۆvL6$9Y6JZFޗA;ۢVqsWMCj3GE-*׹7-uM7 kΚ39_ov~s5u 7WQk[ؕLqhv,+,.&(;Q=9nm cB675V/2IGTvɯ'"x :3+*f+V{6j;΋>{!P璹>:kx3mc |A^Zix"{ouƂs1V ڛ\nu9Wg`87Wפ~sGrK5Hا̾"D׾C{rÖ{ cNhͥVVD&PA[ \)vpQX^l3zp4rYv:kDWzގ[ʀ5,mAgy<͛`}d.)NH'؝z1)f[yU.펯edkQ儨;͛~cIVY,t 7I'HrxCE7c'};q+bT8b˕!oB`ˍ+3v2~53dHSޡ(-Hp@ys(OV]j8qGX80;r4q5T~T]vۂܜ7vG٬WM%Οv 96a5~?˜3]X7~KԄay`0;LT`;(Ԇb:.h&K> #MeY$;@@gD*uHviCT[}{p2p~paB_Mۙ͹@,⹗D F3)3 򴛝ʬ8}XH+,I A9dtui7lMS?˓Di:r&5Cu b4rUwiY5.M}& w%$O"3$\ka s(-2Jؙej\4@yzmߋھs(Q~/ڄnN肽yNsc__=)/~p lr[||>>޿{}՛OW^ݽi OR1 21ۆ8 b =պxvd֨326OOk:C{\!B<uT!^`X+h^Zg+.lg^(NOl:7kgsբS4̨ɩbIXO m2v晪֊8(g GGryV!p9FapF숮ij%=H6Gtц cY8Te{Zsfycl͡*i2M9eDz7KJc.&'|0&g`?' - p15\x=74KP%/:該ov5YPzq ?.NM{F[$?<=/-PLS ɩhsJ؃cUWh]6S#cvt 7`VT*U+Br`nWYfkD&y#0[eMC4 c LO Mu"iY|zCU[͂ |3*9>t)]U&앹T4" FR/NpCaYIWlR2&Ȥ듰!T']Tnv1h3?;Y:ށyUܸɒ!;cjvA}<"LC,h#lNO{C t|Z:nDVDBF5^rZcapVK+t;&{'Oz?匭x}61odF6GߤLݭ굚4jjtzeZuXܩP틡{v(6A\>׏J_!m{sb=w&C+g&e;Ry.1_ǂ8퟾H?A5_E,>KQS7 yo8NɣZLos?"zFݽ}_?>_E8r`J5O;>:ϡg7 LΑ}"(psB8| XwwCVd޽㽂'gdY'cf-u`ng'z5P r9XEؚ: M9BneluGRv0KY2a2ey:Kk!aehy,r( l1584>dS] ,Mg@1<ƃ5vN=Ўdh{α_O;4$AOlCX0YcdTTdNunk%&曛ШaWL}ybo/^!'Ps6q i,1C<ʂ}\fm=iBCC}kǑgbwa*ߙmGh3D( `8ȬUu5شٗ232DkW\ò|rm.&ⷮ]oܧkw{\دe>]]so|CJ}7d_Ë߆h7$!kHP/ͅލWJvCoyBBc迢rCĸj'oq!^J,/{BFOo蓭7Dcr4K/!Eo nRj*}Vݘ$z`7OznUg5f !чb%_=? \?ꟾ}gޥg}² Wzo}x~^|Ջҷkoo޽q-_?}|xe_oCwV?>COPi7/|~|wǏ_74oo޾?~|cE߿z~Oo7__?x?ϟ}y7?7?W_|⟯/_Y/^\N_O@+ŪSGK:mS)KП4+ޤ4Y| )YgXIOqRre5p|1,i uiwG>)ݼKQZ`#39cY #(][CuKm054u4'xr)^X (@BO}/p<))M7,.QqC*6Q ?W- ٱ,9}I~qwv\~MQmpKW7GO[X# Bf\ag eSĆ8uˎ?ز7u 0>G4)\E `) aW\"1h4 Sy3dZXYkThd?H`_.411H,k%h_?3Ey ';W\).t]>u癄=5C<dj;qܐ/.91̨  Om#1s&̩դTOSxx{9eKx&0X|D9:)K ̒4MQi  YUdpNYlf0 ؒn #S5`Xܪ#Ϧ0'ڴ6UT9y&. \E'<i=lO< J\wż=t%.ܛeZ3xxxO%yI> 6,@Izť( @,i$欖l;G`[2a' k} 1 r؜pK1I 3%SI}Vø! >d%upvAē'BcZOy4lsaI6`z6VZ(Di5sO1o^+ =bGs'1L/:{!|9YBDq @/7NwVUD%AI!>zo=e;D )-t,_E!+ʨNQ|*D"BϼR^+1ilaw=kֹ.sv"7]šxǟo߽_/7y|oh/ڃ¿}4HY_q#;X}MjI#'*a48˔xWg w#[󂩹z0. =r7r1Ϝt3/qyi7sWszesta)\ йnCWéN䭜`0+:w=}qbnF˥Th>S>)T?gpԂP-i3/uR  .:U0rr|q=*Ƌp 6b˽[A0Ai0ac{29G?{Pnq4 |p]څ\=p ]b~P늜D!c(NJ㾥@n@P7mA/+T @9u9(hR#I˻WD`sĦ#J2[?XÜ@ +ׅI p_sy7W#:ژ68 \'굺b+v*7[P+S[NȖ>X4::i_o[ebU8i-)w.|Z5G*#WYYRZCzuo5d 5MSƅ[JdzyX˛Xr,*[=K}(4ln 748 zZ2w__P4Y=i I:5+KDrMy7ƹ l}] ݈=,B fQGBuqrBn纡%'nu>a΂ m?Rnuq S8VO]3A+3A岄;,wof$ K!KbIܒGU^~?unCȟ\~I0xI~׿|LtIo߿pyR '+aJu!C(c=+2&TSށŐ$Ÿs 6Ba ǭfݲ+WwVy%qϤa} &/#5y6\-tXO`MefvjyPXéE7YLs0_4}!n+쬢YJ6$/@RxKzuks@ɢ{Oe )0|H42gKˆ ~鐓|>zls06M;鶶*zĻ!x{J]btTVeCKip)vm4{'ô'zJhVn uj7^͚Ve śUnpۚe}}p ~b=ݢ')0,u-FMSMjw EMA E.SiW;û`*pd]}.,OSFx8!n)FOx zG?{EwHm[c#ƒ?@*ǚL\K}6[6fg)OÁi.|8PY\芗xs%oVLW{7>قz:Rk?~zE(޷ b3W_o^<ӗ/6|7_o^u*o-X9z"/_|'=P4U _sQ^Jq]iH09R"m.2쯭^ 4-JJa Δ.*u=(V.%Ȑ 1,^+Z߁{<{uAf&زDG~R9?L]x-.K OH] |Aީtyd(FSJyrxn3z3bVoUI|(ˋs/eH^+%YZ=Uq6'\|LZ9S:wMCުW=ZIc,pIb HΦd74Jp9fL%-ih"Vɲcը~Qsz@#Bز焛9ߕE& {ZLZYʁule }w1ҕr-Eraqz7Gs .y$5kWe[!`zNvcb~*4qtqO(TɴͲnIJm4oB'C u*>ۥY|?E>BܖKm"Yd54iNL`NEWDwtKԒX 2MpE*~d2t2KT "S94 v=Q=5~ Lm'ߟQ w(ti` ](0",E^BHtq'PtYRl/ɋ!}MR9xH_GxqB){jW/MP3cfɟ*OS2Щ1dI>[?Np{OTOOGJj%YB-Lkf$ ^niEB,-1⊠ `.^چmo_U_a5&8s;h PVpgg}8z*Em4Ś3ddO8)j ꫫx^0@wSj(tq!Q m jgVM%Gh{ x$a'KE ϙEZߙ=ɷb`˔G tXMrKJnz,C"a Gt"ixiZ¡x#қoUtEAt1$y.珛*_Q@{fa 4ז5}G7 2`F:tG40󦊹5-nsʡ1ԯDǝ(0r(t qhBΔ=po>ݽT\d|4LmD)INܜƗܖ)DwW=1G Џ7 2a:TcDŽZ^wTq)8Ik27bӉ9WĖ̠wQnF;8p)i>4(L漥 Տ Vcu !\O?Ln(Gl&2nd} D5^pٱN҂[Q ȇgd=LSCo&AY{ZL-`g uًX`$2ɢe[Ͷ {W\x_OݴLf{os#Yv ^Z%1jhG:1`_tY($fH:r) CUH#qx|@AK뷐Eq@;< H=|+Ăkl#3H֫Jqz+Ԕ@==/p,#Bv ע8kB )nhBA/,G@q11G!, FӲf Q6'lwrBq Q!5BE~:(AY*5C`gpW2ݰZ'MpKoAJk h@w ŘtzBܞ|@FcV$,=!vN\b"I; mEv_޵crkq4Dؤ)Doy\]|sfJ+R i '.Tq|ح1{y؞+Q(D+,EHUi`64p zQXD[6gQYSQj]igSOR j!ŔDtB>zLWX+irc]DQTHNx%)g&ŭ~Q$[;/ XZ4$b,ūXoCkf)vw<(/ż fr9ɗ"rE,}л{B-]Tު/\/-z銞Q]#Xz僐9\*EN2d^i#NE&~II&݅l6E=i/H;x7sM !RthX8' G9QdmdXq4!@ƥzؓHQ iW+x `zi4|"hDE|#9჆ڑD$RBΎ H#_0Uk*ˌ"ZwtؤM~~Q_UZ)dѷ1 Q0Jh92-9ڭɛIɋxAqF!ź{;1$BNZ)x7)h*:XTŻ0hFX耍BBU3|b.~*u)Cqj>,8yy)eP=T1hꂆ^)0ں#A>`!68Ԟ8@&Nt +h0 #XDę[c Falep(bG+q[PQicT[-M%YԖ$š0A{!ܙ"G/:a#0|EĂ眏6Ӭ*)  ,>iQc!)hS^be/PxxP~)Ifд#i‘Msˊ-^*I|p!1-C':TeRS@-.z`LIAْW ŊHnV?DR7Q~AQ\hdˌpbIT,*P}Ise$NB*ԅ Ik +K$VO`@܄VVwbQTO&i|1_Aq j~Ԩb)z\|TV.eG=t]BvbXHp&)f*mSt>P8)ht5z(Nw@" 9a<H(eC6zA1B6rՏkF.#IlchXŞ2p.MC,_ :@Lic#" OGm3ZTZ,*=k,w/.d B R3KfYn ^?0B\K{B81~a21Xy<(x4tߣAfmN iĻ'r G 5 qߖІl2ȟveSd$X-Cxkaa'㴡;G/C;O5w?(O;_4|Jr2 ? uPEtXn]ՙ16puTa=۫УT#zmÄRz1 n))R/6A[8Hj 4$-@@%Gw-ʲadT-mKǙ&`!BXQ2/!P5y)0E#& ( u9؋.&6EņBЧ]̓9oQ APd"v:]NWh]b (vq\ȢD)Et.8q(΂t e539s!j4<^|$[I4˜!ΗsQ>_ө&_)J$¡Зi+Y+b6qjOlI閸.0Q-BFrAL{ra6;#MTzb29t9H9k6&rQR Ab" a %شg1.4煻v\W fs D5`)#Cjy;$Se3YD YQ },ٸJLJI*g0I3@EIur 6^1fCl~9,tT Dej-TxX5*d`ܤUqELhl̀ `_RqȘѶ.)"!8e*`2JGXb&,! چ)& a9Hj" eUlmmƹkP M{S8/le-Xҧt0giqQS*).Ƒh!ݙ|CbB%ÌᲸN>HĮƢr?%ix Uhj,^2 sMR2c#-Ȝ<`4G$, 2Y.#}wiČђYF :%) |ȼ^i}1EAf<┈@!դQ9 G`!-ъU|T oI$`EGI do}b;L}o`5 DTY\(MDbsdU[= رT^< -'.R ܔysnD$HS$l8*H}O&]N3@ rF₮b!ߺj#Dg'@¾Ti&/p#ZrQ >пⴰD{f7 M68rG1:Y^f9Jb4K DŽl&$ʳ.`Bg}Ҙ.,@~}e9+rgJ!gpi]U$+=Uh3%J"%΄}[Q)`p ,-65 QaKѻć~1q'0M2צG5K%2m 'EV\d;&6&v'O<.$N9YKC-pI?0i 'i.bExQygc>w}P]0!k J% Ҧ$>aoE/Bg܀X2aTقJޖ]\-!m)$Ch5a>2X?]e㍄ᅲs;aq2kO\~;nQVt``GdHlGlbڹ~ $0DK7 d|MA8R`^M19̧S/4g X|~j*e7ՏL !KLNC.uҶ\VF!Kn¹y vMZ;K2?;"j2FHȘD賂[Ü8G&;'Y|0=OiXmAH W[9$I&#4mW`ԍd?xҝՔUjaZ&E;׸&cAՠ(z0y9vm-Lav TY'5o}/#+`<&||l$g=+`7<ߒkW1&6SG}M~j =V_Јɕ&i1'^+JmL=ʲk(V0yJ|1;DjQSrD(3^-qښ2Дɨڡc=:˛&* dlx\eggEeͨ.a6"j;C@qf{$}:;9MԀ%Ά4CE&/W4D۲2dgi1ǢI3Dž=51fvb[9"y3&ip^9Mn>Nz`싲ذE[yksHᛈ~0 ɸJSKwؚH*|9 ̵0U,?h([r2H'z+"bOE(yr{=u5Wg5ڔi@)xdئqHMBB!ng}9?3|c,wFG:7ah&"̜5/˴1%u07Cm\j} O=ݡ*:rsM0v{a~7{y-:7eǨ$œ7_5,e G6 L݉2-Цi0ZuH%ކol+H] ƊNeu}XFׇD #x).BR=Ճ eJZjp+cf Cvi jBA_PD”;oZD'MaupOrWb>`=Uw8'; d%W%}jr\e:Lat~Es 0Ɇ%2>T\dLJidŶ"!!h(Ñʩ vhkmqa-h[.J:]ֽN^qcҙ36۳r mdn-nY[F(MZk"H9yb?4ipliF]_2h/S w)U^J{tTLb:_愌 VG'!,N9H`V6Ķse=. >N sLΟxg`h▸ujƶq/Fc٧X@ X!0cK0#/Y7 _ {?d裚B[ f:5Q^{`9&BzujCs+pҲ|=L=CNe4/׃ZD,o7&8f*; #!!, W62@pϒvC\yGG=tE }P|l^ GQcye-fd7Xhl&YgAQj*JOC.AnNңFAќ΅oڰV*Vn>ʁ|:Oޱ_.|:P &) M7AGt +Q GEF<.Q(Z2v^6$3X2Cwu܁TDv Q(0-T^jCN"f]KѦzi} AOqQh+C|+E%h7z5pr6c]9F\6qiOtT1Z^^>;nZ\rl#^*(VE_47qoX34hEKzEB"GKlJH Ÿ"&Hڴ ESrt@Fʜ c)yA, {rnftdngGƃގ2ѻ0ъC638 /">{)|4ւNB?)`R}[v+Vgd=d!>eVzHEیW6aAۍc)be^-xXmt>Prv<E3)BCʹ`pDX9,=qS:D[JiN n>IPt8+7{hlHЕ"hu˙ӈ׾IE0NOƚc7 05/ 0S̖0ʍТ磺B{9ʃ59n߭wC1'A$|1_* (i*FjUvtfN[#5gxy M;vZ-wKD+ nOzsAЩM'0Ve?L(36%zнnOGqGE(.?Uz`Hru3ŏ@=Y$lH w_^ o$˜} wQ<(WE| 㓈A3DP *Ir\K2kDZ$p?\BCMB}[Wͺ_6~"H$$9e]ƆIlWn2Ɯc/ﹼp?>=cpK{rvKɷ }gǏw=[ ,Sx~}߾7[b~^G ӄe6+GHjUߵk{Eƾ}E[iRcj2Ӷ$R8"4x$_t^Ht %d/*?ɇmg[vMӯ~6S­V{}VȶH_qg41tdG^hC~>X֐{{[%e 3;kn@kh3lE ?CDzoرhcl>c-n>+gamt򒴽ѹxI;O3 N$P#{)c2?rK1&mMIKl$5Iće. v9 Vy㭧^aNs񈍠Chλ>v׌CӰ2-30,ū-6Y3Or{MQ[TcS[OA_0#Ga'̀q~a,~)g.a3^@"3 ӄс0.[ˌUt6kO%ͩ!0?Hp,_C6ve +A// <vb/mW}̩-緉LE LWcn1.V?E߆IV"[S1Y~FF~7Yo6q6;,\`T7ӝCIc; d]| #h[ڦ=Imwm{YFPdz $dwm>m/?܍ѣetSu'*N@]}P&jjfmzq4[~|}[s n a3%ؖCb͜z(洹*["aJ^w.O^.n"Y BZorQbS"OȭvCw[;vo%~.-E9!a#>6o ݞHk`wax6l?S7Pezl%}@67axշK џ䝸^ lfIxxEX_Xn:.!@5|[S0d>#d$&H#@%I;m iAE+~{v78p[mzkbJ,рbJnɤn_-φ>*NCK))dUa{h7i7"LCP5(9`ڴ;𑲁m4tz$ \^g6O4op50u4gA`Ρ $[wsb`|E(7$x.%w9&eE\=\լn!YCz)b:W [Lդ"Dc.3<^l١b4 P+ ͆amkF(t ?wr)jW7G.dDeZ#z] b7~hO'0*8bSǪ-gcäzHa-gOT6&͢".|G|"N_$^f\[&q2ya+<f#q%u*T^';y@ lZ[!̇*:,Nj-4H?6,gg1|,?Zзw~?__b_􋗿7_zo?~?ۯw_|/<}mw?÷ǯ_}o;sW~G~>xJ_Ͽ|ݫ7/oѾ~|~ oWߞ{{ yW_|m2N/~K߿o~zxo_n寷fߗ?Ewvѷ8(IZ"oM\>; AQC"@0@5vpyjEh%)r& I4Gi-(b)6: GN9;ZAR*f=G:(Y1X c ;U1gH$B7lJR0,@м1/Ω1ŲS2KAfO]"F+(-BLfEjG)wO&6'AFvBx$ h%,"̞0Zc`A84ˑE΂-)cp3Vu3bv(3qK(B_"i\K4)@_ Mwƥi~Mg`U*K}x*4?x8[&866Zt+:2)UtϠ.I40-{_-Ta"T`e+ k/:p*ImB7MHo嬘3K[,~$[ï朜i=xLߍÉT(Knp:%A㬜 5a,7YA\)E@"?.;=hL w^@`P6ŽX JjQ~BR| DM!3t {q0[1PndUh^kr)%p9,|2eGdN/YCD.BDHħ\x`f 8@pm& 1 6 rPR8e*%N3LeAEot˭vTz,Ԑ j-QH6gBѸcaɮ=D"nZX#:Z u#eȒw.bQb-- 7zq{śCo9PwOΡ׿zo?}-18hzS'_~>~܁CrSJyU3n|ԅH],$~@d+ nI9W TE'Q*Q8RA@J7kUA(ΠrlfQ$Xr N:] ӕ&$>kl{QuebWA(ṃd;,ªtnrb׊!XPV 6=Ed<"(]fU- ES!HeQ`&@rbY;3R[50 csU2 7NsIq]csP|R{\\"bSlH0U'zeQEb&*'1X/E$.M;k5%'eӉx42">)s侷Ԕ#WI6rXq ˵ԞD x B7mW`&% k}r5ԅF6p7qWOjcyViY r,nCͪ %]o0]F/zw8U 8nhJ jY+ aK'Z?g,ܕdwt~gNVBڍ"NČ_uI#>d(cM@A[̛hjHovhcnΪxՖ=Li ~?wmX`iaz.E0EijR0, 6F;vB/!͐yz>Qm9oiG㇕7]tI!ƥuA/JSdu[cy<`Efr"&){ E`k/~ h=9"ɐ02')<)C֨fh@A? AFJXw;k6W埬 `kpv {Ӥ0Y@Β;T4E/)sy`ҧPHWxoYVW ɍ3lZLE*^+Ր=El=[ mP&,y9J?k-ho&J J F"!"k1T^B$/EU8vgSt5`qRyjIM 3-i8OhX>c ?B)p:#E Sߓ⛝%RD"xޑϷ߿_F#1v{߈ƈ{cī2?>#<3#?ȈO?u[ U@e X,$Pmp_ cT!/~rfYDv-O5uO~]+zZfҬ4~Q%&=ߠ) ʰ>sMpo hd_I!FcET)խjؒ֋/T喔ƒSXw:q&1TU#3NQ[ʽFï&AЛӮ eijs\nǰ0/Q@r{*(nؘPgp'$)k>/4٦Α`ܣL#l3[W|d-j$S3WU ${Qe285ja)떈bZXT?S`h '\*jĪ'lڃ8*V2N'"<>YTćKhtqyPuAI\CU/Z Jþz*-p-mʇQEvX'hXE.z;υDNi]s΂nRJj|"W].̏syk`?rJW{]eCn UiRnbl\E7څcUfE50aHn)鞷pB ݤLu-JTҘL©XDmB&b{Xs YݴĩǹЦrapc? ?~%RS./1Oq.}EcIN3JWE 4s5c\{aPEOjBEs;4qs؁|JHԔd,îstm%Ȍ:ʧu~2 g e;fCײ^®zgdSqPϠh/6xb72Dّ旭,n:{N7nIV>]9m>˳gUAXN)|6s{%_>Me:nҤYs:-bTutME&V휚ԼS*g\?D~L-ś OȞ*/|9ǿ_T\~*c*O?nMw?} ]M5NDoDѶPQ 'h0bjE˖Sym6aV%Ι&(me z4(1ҵv׌,dE!zpiΚ4DZPVC)t6.G0 ),҃κ2ɜfv h:$Xi?h~ =C&Zs-̞IwZ~{3/.j+Xa1Mڡ`4-4 -6J8FJenK*7(&{@)T+q6n{ QO̼h&`.ܢJ$ =!Fds-l\e6O`79Hii@q>E%e&EK.ti8YV3դCm-s,,=O%)#'4\b & <km N Y/83RORͱɞdU!>QkD ݠa^~;Xf 8oCON v'DQ.EBζ*R>(- y5zmfDEDBJӻs$Y )zF*Q:H|AR() mJ dae܀!(105^I8-q OQ#Hm*beZIDGQA3'2Pl0`C`d+QC6,2ѐ f3$`Ӳ_;ԬnJqD g:ø=ˮP'!`d-kDp!WGz ( S(~k]L .|IU+-i<\gn[c ?h:J)PE _nS SҀbHZ_ҙ .c9Pֱ(:>:]a&CE3*@^C4vBXh``L_g" 2R=7jl8R a ƕ+,.rIՑa5,n5sx5 &BZ-Bv7&.Hծ?'=tN8s53",t` Aw&Ƀ@Z b\fFJ9AMkE`;LE UXN/;G)f1\GŠ9 S"J :׫ƷdE@Zى)J6ZIΡ8 bB6Qíᢦ,1] pVG,(5"m4WfdGkW&IfNiE+axqDĩ!OԵ@:+:z$D@Cn -&Dgt0LoAR(Lwss;s_9:}\a^-d9H"! ~hNֶ҇(xk}Fae2VBN&Ð-Ab-ޟӒ`o_R-Ua"Lu"ɰd5M{E? 20) %%9Xؐf`m ] (o΢9-᝷,)NZ:XZRRF#a>.+Ⳬ5 +b-=9 MkhXD]ϩAF$ g*Q< rŰm(Q< sgGk=(ME>RL49Mm3'FLngLE Eoi\|N݁efb4l?kSr3/?iOڙ<5`QJR([}'7WNifq 6/n6W􅞤C!AI`$mTh2d . tV2v}iEc}xGRktVXf*e\z-l^.Ю\صߊL_V:ϭͬ05y;ge:W 0>!M‹2cRuMc!̖ꞅ^|kMך%]'r١,yDHv=R&U±$|@U=KPrFz9d[Չʣ&7䵣; SL8D=q=;yjҹ;d-OM& x%-t jz"3*+DeZ7B%5\(ExMkb^޲|kv4w?yMXk"ea90:o75YM֪ݦvdgO<bK~m;@At-pZbghXڅY*Q'&J0KWVez4O?B[Pq'Xcnqswr²MkSխwju;l&GA,Sq2m"VO'kIV(!tD IHfr{֒Ugs0h|8̭hM F7 D֨&PPI2$hQdKf T\ILR>ъ,DR:f]d"hzzRz= 8G?Rȇ.2HΉ\1c?n\nHD{"ʘdy>rU_-RH~1M-JLQ\yh@Wktf*1@NvUzkFK{&3 xG ~ޛAVD⸧tVɃ=kذ{C0-iJM?H_"9d>wиLd! K B7Xj63Q6?, U}g|~'F ᢳ1s6Cy dK6/{J2 &ZS5~֗)vC/D؏p O#= -~$Na(1'[hu }C=a_^&2E3ʓ^b+d)U=1toW|Bd]BAt&|xV^jA½S+]+zhLKoݿݷW܉I|uLN^N}Bf\C.Ǭ%vAߓJ$촉.02p! @_byҌ>uŽSJ5WtvoГNX#+5Z73ߛ6uΚ׉ mv7#߯%b:KQLE_ZrǪ8zRԲ<XvBKGZZXQOR,\OIu2A(=XsA'#+]}{єlEZMhZzz.jc.H< ?>Ӛ>O*zJ䡏lRi5ooǺ1uބr,_8(=#=Ib_%V~H-bGI%}Ygttz,6OHefRBJ5:4[9Q@J)6iR:?S*ZׂE&MBx5::q==g5yet?KqɊ9_M.g3ͺ`Mr \2E~Iٴ4NMzтJJ@n9wyq RZ A2JYx t5iML#1mX؀S[x@L;LD#)1-9ikq XFEDZ礟yVcwV1S{%m^$E3Mecu gpgvIP: CDN!$|6=Nk6$"|.! pEy;LA{š~dQkD]; Ӓ.܋]`AaM>>oh0'onV%lvl}kTe}Y/C/n v4"]Gbδ8ipւh|y>#me͸B btwaw|Yf`v(Ŧ)&Z΀(gt4y[б駩3TnɦJ(`NmLMDcZBFyZP5;6ڢO8eFfxF. C|/C=w']U&Q͜Fda±zr4v+ͥi{xu݄ng{nk:O,hhNP[@ѥ]%E?ity.wᢋqŸ)r}|.< }.:覍҄%(nkcZb nԭ:?~dt(רS땞yAFoJ!_5nH%Dt~;[&-@8m.}nU\C(HJǩV]|N+h.Uzq#[IVlt!~ t`ĂNS]^1dXjVtIIO:הt~xms9yðAhr3IddY-Y>j[k4v[a|,ek'28+~-MtWZK^dH]itT=BPy0"#k'̴nԉ:q47o-.j®.9ؐxpuZcL;cw2Oe8iNşeLjG#{vJSK/=&LfK'2,;N)q}NiդX8Y4k?44Jj9->ػIz1*zn^11Yd`,kO)ӽynqދS* 97*P3z y`ŭHZ<"<NGۤy3hZ6^SՍAhs~]ݛ.|f^"gˢۙB@$)g.@^$r5(DCACX˸5E+0qѓLڮ޼l6G͡ m`ALGc ӵvыrϥ{Hi ml&b8O*VOaGê'pju>ы\=Gkx ;CP -HE;'gX.(V,äbOqD&*6ÂZPՆ݈>>ݺ3zqIzE*RAa'Fɦ.8R@R~2$0OQ~uE[!;)2|i*0@^Hzޣ%z%/L-ѧcJW\߻kdG:dK^񽦠wŎsc(9> CyG|MyLc 4sE93u;VdrRC{JףpZc-u4tr1\=`EAHƱ8 cnMWI]I9Q6Wzʬ: rcS>I6}(^W }3m3k.C7x\&V gا0Q_Rd |țQ6#ܾYh&2ꬴ{pc(,}P;tvrEϮ՛wPw? ~m6^thg 0娴sպeVuTA;K@m_3wj.*ôj?*<5ٸC_ 1y#p:ϖ $JYQлS̍FlNXWz+kgEoIL!4#H <[*ݢSf3Y9,=)h~<(S'B$̷0jf*vl;?$ی'w~ ͈K-=ۘ$ A5*,7 A4*.N OkNEuR{zEȯլi< lu F̹,ɢv/! EΏt^Tq]"Sw8yBr~< :*uN >&Y1R[UKܟS !B[~EiW[6>`\dwr8ZUR%Z4^ݤKoAaq '-f.huohXp 8nM]m |ǃøk_6_DEǗme(F{ ΁zOZSAC ,^Py=LoxwoT?Қ&Wnק($+j: {NE Cel{&%(el x (Mb K]+Jr߀ܷQv/خ]QBe-~p:br9 88 wbXx ^fkI OqZyAfO~lp^Pn٢m9U%]Ez%HٞRECPU֣UGnXt=l'i)箟oHmPmW*0}쑭j$-XY"}t}F'O DY:|M4mo)&3ݾzԆ^ͷ{lњWWϯ^߿z_^=_= |ƴ?뗿o׷?O/o˗҇omw/[[cxowY~F>~޽}qO~k]*C]}nC//w7o///_w?m[ۇ?0޵O޽_~vO_~6__u۟^y?Oi~?_~}oگ߶7_ kiZ2gÓo(+Mc*'ܱ jӥp%:ǾN$}oTۊJ$6{Uf|x=8IQwxv-~uTg 9 b>NX5!2 mr3Z~$Zo7֟l~a [-і6s[ 9fyDG04*D󰡢 #ya.=Si.u/Ԃ v)qF }mrHF٣`-L_gC=xR5#JEw0#^ms #$JѲ=O큦& `$a6|Ci otkrd@I1l˙K@GSnG9^hꥥ)ntm#ؽ-+QMy7__N];Яw;+Dyγf5޲TpYo1U8;>v67=;z,BRnirbPPW5Vl!p4Xci/]=}R {BHEuKٕ@2B%΁eG8PTXEĎ܄+uXwݟ{*܁.Yv(G)2Ф(`.%ɷUȺAҕGߢbtg &b1qN(ؕ|قk-D0&T"W0ϔW3嗒OoQL""TQx-mRxC6E[cPZeY>*^dڡ%:X;C/b9GPޣi4AI="dKF]0)ĸ)/*N*v * {>{{ zVApag5kƥ>lqI1NQbxp'Bϰ {\9 AZTYXk)7\?V .2U\)nw@;=m٦+,c2u} (@ȠOt >nP>kPyV-8Stbqm.x A~Q+%61@q;3|C.zrwmPh쐸 j]RzwΦ$]`0y ȝa>T@cN/ q33WHnI {O޲  ,n,L*ݚqK5A@>;rǥc(u$W63NӃdqJ@W'C?bkHNf3/ؗ 6#A9 ӊ fJ9Z]!K4渄-x~n`FyƚldADӦ6W(c[u'mr mZźh c62fVpZ(Pn5 '$a8qDbgĆ !$dFdFH9 $A(XY-gRQ1 SJV)fysm(r-8)**wp3M^A\96s{1#E S\nA/Niq-^%DHxJej?XxH-AS97k9zZṞSfI1?B2OQ\3oRl?2,?g_O_xl}vCnAɦZ֣IɄɀiB"ޔQMyAl3~b nyʫuJgP{,cF-aKy`bi_CӜzsD4]қe{qmk-\:|J.T֬rF~pe&}8/]qiOYeZUG ?Ϻla) XVuN6ht ѯ1BHxrazV<^,-[@ESb 8C'ոSNʆKާKR1\r:: pD5~BO?-vQ8bhJwdlP'Ad'/%/<$|d4DqiJtb }(Z5guNB}1UGj*_b="ܫ`Y.8|3fD'OJڑ*Ȍql )>C*^ t֣ʣ8ŠЩ5FnL|$E K)η]ͪl5˹OP+iAN`.$Fp_ODLU9)8mA[qbowT"նܝ%xEVQtmXqh I!d0~5E'Ljő4:}t0,`R'cRRs`? wV%Ql۲A6X D4X7p%0?s$Mf+Q2Z_Vg GB2=t p,oXvt-{Xf;Lm]UF|dӮ v 2C\k:Fe]6Iнq9 A' ry`+nFt|&^rKcjGjWK`c‰C3zwJP5Ψ{.F,A/GY荿whs"nTi :-Say]j҈yRJJcyٶcGH^V~k*G)f Эz`\Qa^z,۩T.DpLap$َ<_5ӻN'F&Տ];k(1yTZm=@BT _sU;;**sbG^xv[&-."T`B|ޘj6?Umu'MIWG ngy%?8sF;v(kȃ8 ^+ڨ}PPw]1z#ۊ fTQ;Z)Dcaz*%@yGC[MH%n%?f%"ܯ'Aw]g);ʛRÞ` eT]X")Sy #).7!ަ!C\Mwݡv&)D>IB1 ?|[Hˑuդnߢ#͛ׯӛ7Og~x xӫ7v`߼݇7o~ܶo|,7m; >q't L | ~}8;yndfۙ7y~^࣬?]W4'{ƉG֪O[FX&Q3=v@1tꄢQ_0%e69Mu`i:/{++rUi*I'1-b_jn:oPzoĿ{D0Yьa✣W1KR<\'D@>{KHl$ݮ1H$Ӌz _TVb^2dAaO8" ,@XNfy" (|R Iwy=D]a"{`HKW(D#}1r(eݣ moAp,QɞJ#F7Pp'K쐧t/[) f/ni4.`GO-Wk [ `UZhփtܕ't[>6(Bn|/UY1h'1lWN]g)門iaU\HB{ղJ]̆Ćb! (%XJ8ny%MF5Mh> '.oD.]m:6(X0E7Ζ[)2\hE>X~;Kk̏2d`iˋJZ0dV.H$|fd0>r#+5Mf h)5ifg6=PвfT nKuHR5uv?ԫcEu\i;d'q`uuVɮ^W**aXO[[ML}dz/}vT׵ֲ: ͜<׎7}z-, *>^.YIR'4c_ꐼa̵vo *yם,EUWJ  dayˀ>ρ\j$T1RL,[hWxHs?԰QPʡXNQyA?W23weޖvRꕃZ&Mh7w00䵤Ǫٴu_RZO7:G-pksh?v}m6>f \}_ǗD|s(+!Mþ }Rv yC854ȷ=}ۨؽ= \lCaĢ:\ڐU>ݏr/,u?lFA]4PB8_ۃp{|cOf2(n7CgZ9`J9*h#J7QY_3+qT(~:I}?G/0D4Ɛd婑7Ey 2Cx IJWk~r1)s!u@d{fO3֜͠QR!RCx`*YoGVէ ZODkH ɒ H:xE1qOI<^K-PLͧ8h Owfy9șK~^q39_z}DzÙ"A!l=IgB\ؤax.i c]lY-6#!8tE\:U $ *\r]dsךK.jl y8}g"e+Lg%sތE ٛ0̽xK86aN=Y 1ə2Rnv*@qͼR*藸:Õ ijBP: e{XnT\N"Q > 6O&pޱ[AJh| ,Ĩ<.|~ot1H DreҒXc_<Y*L\ $Չ34B.a=w5FL /WnlTQZdlqT>Utq]RzR bk*[j/K;I=:G+U#dn>ɐkl9%y1)XT\G)DI ؋w/3p)\ Wʳ^zv. ϨlrGT¿1+'?>YaLkq_Gc|T("Fzpϐ?s$ՠUai@bxgbTV =)Ytq[R,'<zQ'l۲)FQ6%C;\4|rgt5T%H{qӑk O YNX4:-rky;rkń63@2, ۏyu$l:ў`kkoXC$ǑޑF͟"w 6`+<0R'( AyU ;Uf-ywOeXa BiC'ل(c ;j]HA[\ 8<6/uʎNU6dH* pGvPN6 գ #7:4zرv&DA ?yڛD振(+:[ldZT cm$J*Jv/W(bs= m9)tXiOb.-Ȟp/ko`o`/UM띚y+s t2减SwۖT ԰?:1G7̟~mHڲ-tyy$m 㹤/R-7I2 /4E"=ey{a~[Fve@ʔ}RA7^3*'q؍Ne{șl:Dx7î-Q"jijiss4 )8eyiQMpw&_*p  [-HuԴ_vy؍^wjfN?c970.N@4 Otr.a|ʀ] z(S+^P& H_lbG Յ@ 2IHEoh"+4<ӂ`#}twZ>>>}m2>dg>d<3+ezU> iL卩 '̛!A>\$};@CM&e~bcAf,݅x2qf3YVr GJA,qRpq.o*SXyWe6&VJޚ.6fddo7*sqCydfb6|( cpz)Fl7~zv$/^}?><rܱCL>JdOjZ{nVLk]C#T>w'Ï^j=%tLó*-7#xO&JuJ -3YÔ 9ugR^5U%u90&j~ %ߏ|4|MHw+0hp!Uދ^IutkxhЫa4)3"4m4c)?2R5T̮8_N/&90jCD^ҡ']G%5!\F(VT2tc$~g>3`|7@`=,;]3h\B$ʞq%L伩&qTd.C.sH6OWu3,h2ٲ."J34HIdyj{8#i a3B{12N*Ոl(}˨~\% #o{qLh?&MgԍS=\"%}s,Qfӓĕ@/u?b ԾAʠ xK(ؠѢ#T`[:᱙k wB(uBx2WsOQ]\O!?`%J`ausZʼn W}p+WQjtf0CH-ε՛['?v ȧ[?F⋋/Kإ_#_?~/o}y-S0o>]˅C-(o{9,18;" a3Ď^dcb~9q8 T7Y<)dJU'A 6YL~ore ʤn{{,2<~%Mmاriߟɶ _P^zֹTGv13pP) T#c6yP~d EVo&Mam0Sy8:Oc(lҒ|x6 E1>!O :j{%an`CÇ_#c>p>/M.x6II*$͞p-,b(0(R27kB0#:Qn|ο˜•)*oa0IS^Lx}kSiD[N ,b8ؘ"" 1NڪݟlgDH%#NwQ3Sh$xυs&NѻWG$Y90ĕ4vd\/:syFG~,`}ka|0 Q//0ef]#NhS/Q?!&(䀹 EM90p ¸ޒB=V[k=-LuikgM<#s!8Wtwh\j=G0;]7Bɀ1|?5(gq2sQNZ |yćfQP ɕn~Qs:[%?4LD#hqm\CNP$61 D¹e2 Zt(I!1 V"/77f=\£A,grЇ&~{~ sDpPDCeނg_Q{y80ӣiX (+ !1i#NZqN>=c9WW_=+ln{M2?Z,$bǗOL,0?lHnb v0#,G>>wOxR3l/ Oy#W Try*1]2}/C-_PMgTNq4u.8?Sˮ#WQ)et].'g1cB=I5_<ի9{*ք@Gʞa=5/uej41H`7Yx:^|]ȟ\](=un|o@ǧ: |^o^ŘO.N&ЈUr!z/Ns)-lN隿ك1:K=~ɆBw o 'u]=^%03L(?KKi{KQLhqȀ /Fl]{9X 6K gQ, rm-6ϲ` QҗEyX! H]^8-PsN8 ]gb!$y q^F=emNEÄ4Ūn:YӼ-RF}% åU-7(`Q|z(ͨF"ݰ/=dzӮR^ECѦFqqu+٘fQ]÷eIW0%ZEK-+dRkჁeԸ4Ы9\tI!xP`hRhDZ\B^Fkƺ+'vѮ;fP!L[jQ@=֑JFAa I\ `&EM%&xέA!.!^z DU7ZqE"?;qG.Ik w7( HDLILPYO]I-a8DŽ |h hYOʞT琮ioQlj_X@yd* d~_ |'ǵp+Ɇ3:bxCDy-TIHFǵX) 0 T)Pn6ÑՀ#2)qe}Fd"c85p =) m5` 峉 ? W" ]55S]BC_]7J AcDῺ.ZǙL)Rą3_y#{jTX~⦐jqOwZ:HO`>8o܆Ea1ѾXv@^?&v4>lgſ|#V.<}}ۯ￿pWo,߾ ?|[7wo_wz<7//߽7o䳯|o\}͓?G^\o/כ/__Or}O2tP*fT&tӈs(t+r9ffxo h%SoHtF/4FJ-2n0E i3[FWӃxl\O-x`fOF;ԹeHf@lop~7K_pl,U:xÀPiݕ!!C/ũxF"]䷮zG#TQHFvɕp3ndR/(M$B &! A&T}Vt|CC(s|QQ)-ڎZ~$8k]7Eٕ]۰\%ȬN M#ҶB.T%ً6l5ϔGa\m!R2Eᵀkdզ; 8'h*HXq[:mlQА(hjn.)?4H:$ݸǵ%J]0'Bipl8pJb:#P)#Gg=!ؿW@ Z˵Ej]p2F@lS]$\~b~ wCBZv35# jKxgụ̈̌ˣ'^ǚ_4ٿ;SS5\08yiceXNƂlnaN)fk69j"̊@ 3 )"YŌ٨dGJ S6vJӵa\j'وFĴ%"B 0dB`̾u^ʋe<г ¬4LXfQz )HٹU>ɢE4)-+ZFC(x.P+gޔ}f)uHC#+blFS94 H<49KŌhL{+H;"UiMIK無Q%Na0RxsmXxTo|npd7mҾ!ɪL/%蜽sNZYUJl[J*g`F C mU=0F'5,i>H0x\I"MXn2ê+pJBh}N A?,DOV!$DlFƤfsY?*[%Hq隲6gx6f!FԊC'X8C Il5T: !۔tly/?=pmlW{Xz AT˟n]!qFX; ~[WpHrvGТH 1TZLci=VDZ(U!#v7. U&$QBW+O 0d6][3cB4Iܦ,2BʖGm٭]{Y1 &9bl?TV!Ϲ,+If4/tl[U:bH EKOq [)eXi=;רώhڼmt)Cskfs k4:h^پX-J]ycA\P2nڪO,1umIԮ,b8ND9`fN3ÄSn>mv%]e4.3J\R}xg^$ƞڜkUhCb2.TϵED\ѭbX;K^\W&5b8Me}eoߊ}D[W͐ q Cɳ'O^xFnj}u5;S|{b#,0pxK3 6l~EɻW|>S2/2,t7DPWO4WOں]nZzYY_Lb㣢{l{\˥P\F%msMPhlu#OJvc.~g.:ͮqH}%Q?v.ղAK@Z*5|99(DE F>UP4Tx K־ LUj+PUFtiZY,S dU-L!UHIJvnSk^d%Ҥ6ھࡩ%SWoi|!{c;t]h43I*c ; )x2k/ߣ-qU]GJ 7g TقuG]Iw|QgޙX,%4^ig\r$W$ZZumQ%;VF!ي3Фm̨Z|"\;0ӳ@ө5 PfpE|WGbIWL^L4Num(&Ali2#JB;qwyժ͒1:&`.טء57cI7R fJ- A1P EDA m!Y\^ۗjfR] ,6rҕD c%v@O[/q%IB\iU,(pD>N3;0\Ю8hTh.Kzoej+U X`$= $ )|$|{%`uF$J.p^r6dY%8mP"s _=?mS3\Gem݁W!CW'%fp :",tZ:R=%̰ t Э VMA\Hr3uvVع5"X[~rVLK=v.nBPMvAgTy:"oc,];:]7/feuI4OvUb. H]LMuFTVoEfhff8k!sPHPI8w!= [&iR Ici ^qXOR%hњD@$HrfxZ+-02hZj﹠=*V3Pd` Tr|C\,4ssB=K UGj f/q>ѳ Y@yBV5y\TQm<*=hLhbS1@S{7<}1~ F\d;%Zi\lLA2A&PifL+tW1f exbBB, \GI:d@ چgv#(HU27-¹Yb{W̋aTeB,[;VRJ6Y,Y*0U( T#U|ţC,BW^q|=S1cH愕,CTd8cK >`]S8oǪ`2zc(؅,H Nj+=@-էl>e֕*7fEI$UR)=3@l3ʧ1"cK0rq߫1Mqn 2TP\LX̞ .紡ZsPOqR7Ƕ*<#˜7b XkrH 8&Op:&cMӄ:CZnCulC,Xkx3-1`7Vp'5ǭn&T:Y7C+؊ ]͚Jؿ5QWQ1g['s5#&HΔt 6V٤{ ij#W1WH03 `4%}26W_A~$)s?h:#K&lcŪqĹG;YÐfOK$ojhS-vϵBJ.Kn]ҧS$HaC$PSKa oe0-}]ETfi%q=sI5ٌA\̎&FY0~Q^>*N6󬛤+{ĒPr.Ϝ9E2Sr*iCtCUl1Y?tym2%S~G((ݺeV0%+jGahaKBcOA{PHHgiD;ɂX_+IhW"@͋j# Mpx|w- a#wa%"ih҃BXڤgSn1y@5 [ʸ!ImGu=-m.5Lb"R,HMnt~--Rx ҝS9[7{gپVVY^~p[C]Jj?9qP"7 In3L9B9QV)C)vG1iZr:9B]g8Wb''ysG?z\e`LeǛŔ@L:Ɗ-vPUqy5d`KAn/5˔m:1 N TU>smeK:RP!9;Hִթ[=ғ:Zu,6No_m4mI&= $7'y8IV=U5%yI){^OG~Pk:}{$:&i :qfN[=r> Qra*>5;Mwҽ%6)y4RIxR1}FJ.wX~M^ҾBq!<w('70*ZщojVUAf`&]ɖo&R2eh)V%LĦ=~!?m%$pcirӝ@Bg Bm<_ I pHGЮozAg>b ~.H.;$23dKo8W-Sgs (>'t*7^skN9 YUI|9Ѽ\#R'^zjC:+փ_1NP];%ZڔI1a2cCi2pR-f2O{îIpR  H\4C'S8/K%.ö Ss.jG2`(,5/ +CbR{xI ͷF00é}pYjM6q-S钞&^4XM[p3aҢs%#dN#R,O,]nt/7Psg1C(YSvx;ĄkBaWsRni+ICpl(C`ϰmy./Z*=zʮBLh G5[)ŽқPH{IN2v!|zC *ta[CO߼xh^ҏ0zEϗxF[d_=>Cߡ8 h(~>{?n7߀A煂~]yy^vOIؓ#ׁ2~l8׵:@W,2U" }~W%`oّ˵4NˠyP*޺<\gC}i~[𵞮돜Tg%J.38WROA.H3 Ut9.qsV$\yZߨl5YDՅ(p JˢzL.;>,^fRjKю ft,rSt #g($(M9]:ܽt(ץ~+To{̃˚o%v].4^Vт#xS_ڙ?f8Uy;d+/exS}pCMgJp8^,A;7ę=<㋗tE=|!-;ˁ+! /_kGȒ+r Q=j" c<K%W^{{>3}O]ZtO瑨3@'kE )Z܁./۸L%A:]5i23.0 ݮ;v5@z<*r4Fq c[l>rv`Pyփ E[kR<(tcSM VoiA|bdmub=ķBл~>zσ+#6iIݩNf_aI!p/ҁ2d}ăM[b]w9 vp*,z7^q)>|j/ ;uВIu ٟ}˃5\5r\>gMݺΠ`񚗥wp߁UG[,8t̃rb9d628RˢWtoKשScQm"H<Ѵ \؏DľM^ahBYٵFj *U"Ƨ^&Dn͏pIWwKIZUF]7p1T$<@aT>#nk n )~vNX]\|=aiٸ]8ؗS,uաbyچIWy)IuG,tq_8׽ e?pQV-솑tjgˡ r@a!.)w&4dmjd*ilNz1edV}$Λ+(糑cAYG+voypzz*TgOGq]- Q1xܭSzˍVn(1}SЖsfeខ=kU&g>W~qnj >l&R -T5U5|B;P9oR/=^weFozi3{[G#x:K1k86܆@bm!B[W 0p<h+yO]![etXBxfSi08?" D()@= QW]Ein͡Տ2~h%*Ay|ȿ*!`Is J>2Z۩He>NR{!e.mlBBNXF`ز;OBC(][s7r~Viu;tyYn^JRdfrD)W23k]q)8iNe4Λ=_S}0gwoqe–YOÖ6̗Abh\lBypT[K<ׅjxX,2/*"-O4Ʃ>{\uux^Mk+ovWuJT,kh'lm>O˜-"_'mMҤC\:7Y"god潳i+ v&TOɖWPΦxͦX`M]ّ2aB$'3zSCۧUvY o)Hm mU ~|OȯUwɮT WƦ5=f!8~?C .Q&Z2WV1=6ueh 3QٲN-G xQ1lƑ[[a"h+ yofabNűˌ ъ?XŅȜlyay,O%M[;r,i7??c--uyO}^8K"FОtt*燕jN~$@≈c\1'9d =-z4hrWg/;8Ń-d e`5DVCM@yN,mY^gm#[L,nDfζ*yS zR&Z1f+agDRhӮcG5Y4 "mG)ݕEs2DXSWd F{=:4ea m)G7&=?GZ &r- !R#%E33t?Od}$"ɯ@Rh_(<9"Y.W\*/#Z0me[gmj~h %%_kk3s䄔ۦ"#'ĎRĕŧɿpgJpդ#igR[ƑaOr%G&f!'rQ/sssY3無+zqӰe"Q_ n3$jj +e×5rU&ZE[*X?Z~Yql/Tf]vRhzٙ,-ߴ$8j&&7{*7ߌ+€w#\fڑUM˲x#+8 s0Dg#d:y7<זYh[ٷ,e eٓ}Ę[7Q!*%cchM2_,|!ڹ4Z~d t9CbBYlts=+ya:); xk=Y89zW<'W&QFO'7TOttuߺ{&PCVT6 lMQ 71f7aÜ33Q˟ۻwBgߟ]Rqdy*߼w^~͏:9<|{swb>zw޶گ_~B?|8xNf{Bλ^?|Q_՛ӿϷzݔ|Ϳ{OuwOm^OϿ߽~ _/R}?7~{uo*:}s_~oWv՛7_?_o_8g{3GrE3E5 cCucgI PrD"9AT{Vy[kj@dnsf̯LR̒;nMhEDeWW>f(%/D;b_i7,|gK]2ìS:s!,Mn#`&e=}X%w~8M!*SUX^KY < _/,a|X˗|CӀw19Y3.%J RՒlEdsMKG2`.'B/pcp]OHX//O!C3@P?I:B SN]`O^2^0s{2Ka>88Lz\_#1.XNFƣqQ#˞Efzo}S=i6l _:9buگ.$WyL0 )dd ٱW@_'9nYߟ Fs9dq>0ҨzQ)7r0?]zBXWHCh^"1~o/ܥ] 5_h1~DԼN\ J͟8R )zS8 LA2 -/|6J 3m XfKݲ]z3BE/Y,Fk2R8-:?vq `V FrDxmAxAT ^ vȄX ΝMy"m*')0Vlmaψհ2.E,d;!2?z޹Au-: zDŇ /.Z;5fjN8LMr`.X;9 /ya@#{*d7bXQf` rM]%$=0qL{B޷e}RM;L^Uӹǥ&T׸UN:7 ns b"sQaF$ S}ytbR YGDZ ߎ:a{ Ht- e !O0RK[;.Xƚn0,{ G֋N(K&N:57AKTA r1Lf%{~)cKRY,DWBJ@E`w Ҥ)᤽6%X lcby/EP"HrM8#:˜L*`fyu14ltg!2d As#:F7š`5gZ܏T}TcvŐ0hBԊU1m1 "Nq D钞\c8Vp!rd'/qxcVu}| p.:bҡ 7Ղ0C VczӡWP@&KI(L`ԥ' bڂǐLE%j2)Ŧ ȆndQ]PaOħߴ*m:Īĕ2yuH5sx̘ĝl5.z(E/)1j j9KKg)hP+ Fyq٭<={=n wnxQX#c9X>?W=έly׽ R1tQi|T}!Wc1`ja"kloHȱ 5}`Vdtybcw)CC(c.PwΛ4(vh Ӑ}MҔ!vh?ڶg2ߨlL3X@ ϩJZHbV|,NH+'f&k~@U K$ySOc -B`j8߿]r!"Gpoq= >quJ< -mse#pjApYͨ&, &|@%P*.'6" m?8q7ļ&R6J#hr1*Ee(_`|:'X,8ib:e0*ˤf'@@re@I\@LD#B3W̖ff eqڐ:b*\tt C-M}간E'BN xI=q mق%\k+4Y㠲Y)$:$]ID %=k@) H@_`r̼V5܄KVKK%L4p6oXjJ8;]؀2ґ XC4Y}u)aJեFi 2l^ezAC.Iq35'hIAD* ]}}rIFe(7LEzx14'irЌ2&Fk/f D-R,VlaeRBLk& 1Zr8F h4g,&J\˞;tmv%`7BrkfB6SvzC$co6Ku.R8XK,ᵚ51ze@ٗAٗ>FaqTۗT{[}a^Z߾~ZX~w?w7o?~|Pn ǯk / npYmjYIZ8B!i avkF;,Jp v )ƾ 0lhQX03XmRGSzHz!VkҊܽ:RRm,2P& rЂ0N`t= w}jm!1.c#6lL`Ƽ$a^hӋ@Jjt/fgr,j@`N65JD-<\" lڭӞ"Ʈ`1EU^y|!^Z`8qMFa:7"/aie6,qhi(D[c}2҆UqL Ilu\LqZ<ثԪ0 եdBo֬Rgхz$ AfxAⰜZ'NE^,pMCANPfNj%mjմT2 n΢xG$ 㱡1۳=7:LR c=Rfi[clKڋxu{hjKpz w]tD9dqcx#QĶHq4,ki2ouH<">kmTn.LhMP&1Or 0cJaYuY,&㌔Ǚjh|7loԎZp张: ZAP?v6*sdP5 [/ 5SU&џ{Zj?Y*Tzb;W"NLCM9TV_"iҞVkXXVS |?PXi.}/z)%QBR&)q8MmNiC'[1^Mb9m2fyU%lĖ}i'`o~s%wsKu3Jf{0J9dǯhZ|tԈG4HP(pP 'jFa84#gReCtU҉z sVh^D0+eP?;%70uqy1MepK!WtZ:N/Q}t/ˮX0R1k\LrwYX!'m25,~4 ktR;)@S:T}\V{luUUk26Prl@Sݦ]F ?>4/ᇀVqYiofg4h>:H *-L EPK±0:_^&謴Eӓo5"ǿ ،Mue& h!q(Zr0SUJ񦑽 죴LBeLIq㱗?])[JWZ2C󪮇" ] (FyԸ風zHS50rT3-j2Co E%zԿ]ZF@/D[hvvPYS{&A kǃ(si!ГPF{gȚ`j'* < .p+U6Y~&峷QG{W!XBI1_Oe oC//t}+_{fo* ?? r]}OYȲASPҳC26GC}Q8]N[#Pq+#Ej6lRS?!*.e*pR#IpaOIM=fc*ДZZ2U `؎l { Hn;2HSD6 ViE8lV @i7 ]rBC6 [-96[SqIϑE+[.Hh <hzSQP9Wb9GKEﺠsܪa)*@)KeI!8+s|9`p/S&XM9R(I1&Z,Kp Z=m h/¸MR5Jګi)M9 4:!WNqǮ䞮&y !KQ0^|RBYtu5֍h5A9" {LEMyiY+1щ^հ ]/';:LTm4^_6ecm3BՋBOK}B<8H pTHٗ j^jw(c6]X"rAM(#pHduY>< &czG챔MhdUXCޅsq/V|P.+ϫWS&PQ[j%Z& :Ƅ[ r^:>yKFAxdzlZD!H1 '@ lBqoO斵dpjk(C+@%;,X$OsgF۳(b:A޲S$1eA*Tz_zbG@_.u)Y[g*jo=\ u Ro H5,U{?^ !J~Z9ˎيP`ػ7qD[D5YCOڽذU=OI5vNЖfFس5NJ&-U[>tjK9`IeS' K L(<[!9M\[^O/P-=*2IE¸ %;Z]zn,l`n`{`f*a5^.c8д&%Ƌu`^Cbl@ +Hsr3OB+Ov[#;[/Z Neg/)*)V'}[Zjw6:ަ+Yə0N~7R/Z/|:al^@ T#miiB3CK -ϬɁH/Qw0 ,z;j+90RSb03 F8 28gKjIҚFv(:WV=F F8Tvk ̻ v4Vw[ڑ l_'P#=3}8ˣ.pc?}W:RytT䶼;in󍭔:t11KK}> Kg\Ua4U.b˻˱=L?xT!+JS F)DڏU.zZE/ZM/C5JR[K;-Ⱥ*)kMn P6ɥP@n8I4?u`3L-esnqHMFQwmَWg_%O{C  ŗ e PЁLR(ֈÓgƈB5YhV&a!*^Xr'֕ZH(Z͉tk"y8[)=&§ЫQ" N֋,NC:l˵."gTX bh'+rp3Xfn.#CL S<,<| ]ZSvHsʬh.Ѓ`Xά߬$\mAtW :&ty՜dn (IL(,Rw-o=M$Z'Su*܈R~_Y@>Z;Qg r2zWBEZ ؆[\$X C&gcIXQ:&ejXPHmj8r.Y^_֜& *mX9:IRXK]Tٶ"Ͷr#&mK)YxӋI]Jqzr]Xi1azVq! iz%;Kz8ϫe@: W9wlv*z4'дMMU y/fԒhϛ;[m1lЖ*I" .Rt<" u̱L2]О'\ugfƃ2L~Hg6%gѹ놦'oS#)>pjVγk!"2SoIzC ]F笝I^A0x.OuhߖDz>㰣[SP4 dD~1S?a(3XVh`c77ϻ=m-XAᆬ0 ֞ zXW/ 6H5Jv4f~p4ЍwSyzde_CS|zlv9i:º$/SgSCGYuQ|3l:" ˆ)qC{'ͩ!Ҋ6=P7ٹxzxd*I,7{ka c?!BC0+}msg)9IU\YfR؊|TqeU2+z?1gӐ6g 9+y6lYɳgR/1I _QXn,mGsT'-sRJלY{ٸJaD6魔o8!=8oHO {֩tm7: /]O'wr*Do$=b2Щi44&V8.հRqY;E_ˋɃr3bi(c8^=10'ߦ҇t{t928VUG bJhшE.,cdܐGmIV$e-]--Ҋ+2qv%N+Ig!Mp N }^$iJ^9w7J>Ot-Ά޽ç}Wׯ_>||??$u0SJ*㯌OOyzO?7y~tp.MmӷoOx龇SY<#ӗyt|ﳛ7W_y盿__ϯҟ_}&/sL'EML$e ex餜CdOѷlFdfxk~zDO**.$/(v!,dyGT#jI3Pt9 y'x Yx(^:HBG1y߫ʫ3/2L}FbP= Uƅ[N28CNo Oup_V` S%zt [>vlid;YyևS˾Y LtVN,oV y@:Q,`\nŸy>֩&E j)] Qʾ<00L5u60BvGkvV9wF"1ȳG*,]|:?|]I5texz~ȯxL!煙l8Df/ ɓSwYWe#b"L5])-.qꮓ0*  &\ize.ٸg\ ln:/AP̂ynYu#boKJe uzQAKԮC"4~pfK f gڊEf_ /ʼijƷYo휮RvՊ2mfBQzXĞh9?[+[&:j%O΢!eosUTA Udz@(0t8 hm!>X%ù%3af_`arP.:X9o*uAo0 IMY1 vL1S?@zZ]\op#kFۿ&Ya5P^<`$͌ڗǙ=n`˼_ ~,v { -će :z^` an7x ;\lPKv<YaJ^MeP֚;f YM0 ~lySj0Ta0/Ѹ}aehn@t!J?:S]0xMZR="Îᮄ1%#GzWK]a"ruLDvh8pLJ۠caEE45U|Wa ^zԪmm[Kq:[H UIn%h$LBU !p=\tHOh/b,cģ#a_$Hް򓻖*\' [@("jֺg,tw!ZiVFlHjЀ;~24 c!~10 Qg'ҐDyI`vݸX\u]t\%A/Q1+'+Pw~иjo{=דոwPhҞ(ҥ*B.Ap@C钨]z.ˎ$ee(QJw+TC,y9x^$\U;Qan ~6vtT80i5 .6SQ;b ۠.,1$}b j/΀lfhbZRqhko=gUu>-62ĮVa)uY,Ҥ\s[Q5 ؐ1=gII K$$X'ztgO+iOOx{GHbg<~*BҍGHz&.)w>B`%;WP fW!X,gvC[N [xj!_e- k,9=6<[p.˿=K'ש}bE+^9]5}i%6~ո%TbsϾY[ Zt* Hz@^`vC.G˗\/_7f)E-+ulb-wCO𖧄@ d)}/ӫ0akmlX-_>O#`$L~ Rn GŝWdy2Qzj)d.I3k30e5ub)v(´$նҐ`Mr#1 Q{YKeX7zePWTONX@hQAR5{ }X NzF($!G= t-/1M[2aMnX9~l h݁ru(9X<(aD@Tenb~]`>π9SLfFnFyLxsيr3%KYi TEuӭu/HF Ŷt6TTU/sR 2_ݛ՟O~15W/zŎ=_"x8Z`O_G\lKٝHD&8nG:soj)YޜBFǔuSZ}#3@VSQ0=j(pZ@x`JR=;=*Nv>O?~'GrGI(ښ5~w+e8+CsיU-u&o޽{wo?<#~_nhq{j~NG@ܝq}njXxZd?lI !L}f&T6g  Ty:΂ix&I68%FΕ^$F\,FLELS͍i8 Ζ=+& !1pm)1sL\S@r])s#`ʙrQT,`b,uO鹐}좫eѭJ#N5<Z Kc.D"`wjnIZ_J$+Rs s+%0`Ӣ9RSϢICbYdvc)Rȱ*l| ݨrP,YzVr-f5r)|H Tmbk eR ى:Ų-hen}RU G_/odehKם"7nz&U$H2leX~h6”'[M:@\@6hKaj.ӥn-Irn"A7_vi0|W\K_]Ic\pe|z͇~7?ǻuWK3Fϻn޼}_{S=5@ E :K5Kn^հPLnGn 7q:;>Nj`9_pHS48|)C+5r״}::7 ak2n}wNu̵ܒsjJ>e-s^IMblnݞΡ1^FuXݜͯ&{nRޓ#H l+PY(N;+ }߇)˟M`[ 1KR8,L٦!b&UlNYȉ 1 fcP;7f%5UGTUJp((/;-0ҊVj5&!=p#./mNE @,w><Cxl;n$Zmߘ9Z5ύT{1n\p gE07d\dz,SSa^[lGi!5S34Si=Bj 0f_&yyNݫJlLxv40h2m16f65XQ!nac( Nrlɐjkxnp. 0Wk<ʜ4ؒ*H )&XQZq[C5n,*"y& j s0|qԒ8ꉼ4Qv3]q›BUT(IH8^0mRUPzGFFͥsuW'vd`cFȁ%8r%g&2a HN\VOYP̕9ؖǑ .9 ۦKDRߓ^S 9W{::gt{%_oe1ܰCmHא SQ|fkkѻT9>of]jVk3 &/A;jq]*ҸM1AX;֎v\M{Y*[gJy!a4o8πCn̺7U@NX7s8-~IJr[moHW$TVOp'Aj' h}U+.)Olu*U,=z/KT,ǝBX\*aauMϟ)O76hٲZ&(0!YS$Wlz3V<'(4qqrhq'!(ߕ^q3xnt!1K0YiJS.kx88L3V i.ހ)0/M{9[ggKnfSF9޶uMxP$¤)5]R=Aj 8 !U3[[1=Y60s,;ɇm%̺m wvw"hi+@=}F1ɲ&VM8Os qW*-*2aαLR-HV%ي 1CD[Q:i)7>fdMK@< 0c.c\vMdO0=9UX' %Aey֭h ~`2ʣbIlzLGal^$V& JK։^n7*y[HΘAc%NetRz!tS BJ1&; SFκfKŊۛZ!c;ղ9V}bW@l ܼ¹VUp-~*c1Ha5`ҩDHN9;YX{#ׂ`TeeV*:g5  f6<ρ3!?bzZ0Vd5N4(,;@5֖8RI3k^aV//^$e%c`(',J] Rp5(yh037mBKR7/o^}-Ʀu M1Z!z(oJgԇsd:}s%CWֆk\zXo淴F}{0e鬠2XYJ$TiĪ/XJ9X*hiǴw,wtk ,Z5U8I!J.KDfݥ;~Ew?%Kڋ`1E}@!Ucä}^`O !{ڑ!4B%.~1M q# *M~wz S=Qj|̃eWo $Q{w`)J0-F/,5hz<킾{8ظXu麤ݖv< *sΐ_Mj.-@0v`Ut u 4zDv{фce 粵:;klFptןCqfrFf;<'[y`I0x2XPFOt]Iَn]kXM왑dP4zj0lX am>l0`׀ńi(f%'ae]i^oPvވoN ,!D/\ZU\%f75+x R8_p$4vi?u| %†TRJBqʋdiHzO8)G,u >ހ22) ]n=^?/ie%@+J3pS }O*:zZp#ޏXRDZq>Oe4J ]׼h_ 3xu% ȼ,\U#:<y Hpz~wxqo Cg7u2%jI =gA,ol,Nt~::$l\Ŝ3]q4yN.JUѦQSC:ݽCxyn[3k4,%3cw'a3 Fq[(J`E@dwR=Q(0Kdvlp" d)xM )LyF&JDE0 ڈ+zm!&  Tp,%?>B{ 8r @)2H %J Z4Ǒ|jWyhaq6;thX Ҟ =_ WO q9:>e=obS'~ &  LlS &gDanmCH uOy:3[I7k; G>0#y(_neb@ ١~s0 M<[ss[,mj sP6i0Zg,*տ4~$l j^'f/e;?BC+*][o7~,v1d ṃ ȚD#/Y&nvQ̌#I}ᥪXׯA ^}QLG#V?*>H!>9Nq:LRx7:J!`ƺx Z1^|>XiT}pOG5J e!yi$:7$st* Fa6\R:^搇lopiR9 Z)ΡI}IgVIͫ"nsFP䴌7c SZ"&IU%2CQA7:_ f"ļoFkP CEͥ 2RHCRuH`$q-ClE?CYqoʢyi4".7nP\ZėkmoO`\zξyKx ktmZ|Cܠ};! ݤy/Dz:"@IIM{ &M8΂'2p߀߽˫3"wv88;_<駳k!>;H~~~򛯾yt:ߟ^}{x]|ǫ/.^w/盻 ?)K_oQBO׬ ⳯_\|}.?eߤG>\ ]9___^W=^ο=~eU/,3piC+ 7$lA[&Q:p $4% & EFœ>.H QEG$AM$e[9$>y37ߐXW™V!=ރov7a(lO2ho7fbkPЅK7cPykPV5msVcELu$gۡ$%UE2̍CRm+@wM$V F$jm:0OTl1 N]TcP앛V wT9˲p̷sGuHJ30iF% )dJ$U)E:ʓ}6lM> ӂ`*,I7PL V'M`| Xϖa2Yr2v,0B?ڹptڃ '&"-S_2cgU9$P7UFRw@~@#a dXǕKI{,o>, isT^`z,LY" `sUP`Ng0F{2E3o0Ȏ.($ LAaH2OdPwXvdG;^ >mjrGSEgV@N_MEL\ڄzTP>DŽyĴ` TQtYP0 },៮B7O?+pz](o_(kOoׯοK}o{>ryc7woq< Fg:~x? r$6TRd1NpxAX^YȓlK\ 05Q᪤.6%nfh EI'1yd&WO5hy!D=g&n{g;xgÂRô??຤ h=01Mvb^r v^/?T^ z\1Y8V =:L8 &<`jy\$^L2|ʞ&W5'ef'Oh{{rl 3Ml6 O@qbsbrYzdޔݨavzϻ!.lyYJR}[<r kC^ u1('oD椃m+ ;([i p* j"$WvjLi" Mhuni(E!v紤O3=I <d0|Snp\; 8ItݝEN7!T#YةY |zpe_@v0uH0 8 ||D娳{{{VXsPu%rPQ+sSXH-4 :n ȞШ 9~$ZE5C:;ǧ֊E[g?(.:c\4;rP S&rdҠ>#!8XPjo>4%M~H|6v5/KpF-KϊMjSo>밿b jG5UtyּORLvlga.Qىl`=v"e{\Ҵ] zWKbIua矪 OPie4I`mFO;籧C \9nk`cߚ2%j[=t`=k5oTY\8Z3H撵eLqf.u1j}Yͼh1yjҜiApPDR-27ySu<{sR_ ՛ $Y9d0}y{=-YmzcHnNXg֛9RҤZzC^X0r 7KԮ֜Z%FJ.~R&%DjZ) 'ָ0%hǃqu'N Q窸8],t$:d7Cϙ>;/{W{W7?eumkG/]w\7:BZxqxiuGiWR l-@~dNҊĔT#ObVcjp>09mKh,oijKCq"Pf؅%i#XK~fnbׁskCu=1JrӰq ]$caܱ c@"( +L6LɕUVˊu` ` Ț]$=m I`J'dJ9;)h0FO*fX,Y1 Hb^=?sgBPXҹ>Υ]KGgq^§.҅7l^MA-HJ5k 0|\˖:0i68$VoR_HIT534Dggk/LErj73@w?%rZi˜s!vЍf#d*&1jyQ} &9hd Hdsf | j[Wֱ|[ί`80j!&jQm-A֡\8 np9U0ivGȕͰB y;t.1\0yU12*o^l%.qb7y’V c$r}՟?@] =geWG3r0G)*\)\ 7T`n[P,1F 69Mb#AsFZl#͎Cv(I-'&U +aQ 9Nº<ҼsbGseeaR5={O2-4Ҕ'y壊 CMI%\du,y A]pTr9- )]n^j^f]\d;MOj6kviujtf[3 G*O9M@swOAf`'AOnW4"I^ﺜ]?;Q ȣh؎̮5jK&Tkؒ&h2viLCWIW&uk걑yXwK J/ZJ[>PN5dK@jQ:U=/a4do"h*n],sB+ҹM E@~%I~+QVS3k D[(&rmUŮ|seFO]n`<,o$9=`ivYE}Cؕe`']3׋G4kO( ?%:ROO@,BɀB#VIm*fg=(2b+A䵜ܔdR$[ pJ(|"# kGk eRrzvD''aR']9ka0TX@f+l~l6hD;*NÂ]=x1pk54|6V@-Ȟ:sUSGag5)^Szu-gv5q]ROL\B8tGv&aHVqRmprz5K,v|۹rYֈg-VvvZhc 7˹bۚ3l:I#'/I\Udz"'%>"xM)iy=c85D] 3Ҩ4PeINT)^mj9TGlB\#FbI!~y'Y v#'ӾN`T`KFfgVJA!ХROsk⧦Cħy'9 ȘFrGliF y]+nEpjGxbhHT^ƹ<'oD&cǺ څuSCl]TPew1 VW.f50f1u+`:K&$3dO6n5g3Czd0@ 3G#aLثuOF*8XaN  PW>m^7貱CRι% wNj{L *1՛g`@L `_7-Sܨj0fb#sYZɑ*رà€g'0xgl (HGցT&fùS$SSa*8x= ;6״|Bs[kvԩNIڵ{XAd7r,BJ2B9[8a#gwa}F.eHC~GT!!ʳ׋ #NL3g¨it2Z f/JsfӃEFWj;P!rz )gK'ڊ+0+O*`[GJ5T 3)9*g)jeX"f5O$^A+;3h&퐺VސYr,C"CdwPDRZGUEDfQNSH\ Qm(b/gHFx/;Z4a|0G != 펊D^rgMX5cyV=99EEĶ;۠auvu2ͻ݁PuH\˅$NPàe섭PbS -A }*@7yAّl z;,䅜SDb+XNjx}7 3YbMUZ#Ah7bwךIs皊+2#: $kh"X:!" c , oצX0*G`𜗖vm*%vO CT_$.oK'qmCU3K6F 2TW",I66Qj_)&EB)})FjuBq멇˳wքjs1(#7(ad{I* 1/5<&9:͙⑴NVUݘ*ɂkY:#R#cȠvO)FԞ&VHv9aHsn8B^nb1ȚD Q쭒,:w PQ}gPRJN&h3^,d>AVQoeS\eReM-xD`Pn]}PuCcGĔieW`b;(įS)]zˎ;\ c߱kjuXj{;se۽cpԭ&L`=fM]c6#4Tƫl`2<`7DnJ@ɿQ_,Ƃ7c@jP}X!BLXȹ.ӃY)̎&bpr$$C*^eY_#4cv$@ʠ n[0/ !ܸ;ۢ F3l<Γ:aXO~V1daրa-ɺN-d@ٙ1- f\MLmL}A f/0! vjr:` j:r9/730$i Z 4x5чtyc^QMq~MA2L:^g㨰4]Vio><?'=pOA >,p]&L4I ^Tyt d>| # nJ>9(i|;Bt܅QnZu\"O_ $˔^d|t{;S*LXVUHNL`Ik¤Uyqy%ђ icݱV>P4>L2$i}0sC%+giGg҇<$:zDçpy78io#. qㇲ#7h]ęeaFҨ'4Cʓg!\FF&n&ud*7$>03I[։&#Fd$ߠh.NC V0Y ޠiUac]&> 29!r 1[VATؽ"*#>AN+ICy5$t<֐`aflT@xiב/^n"o9)l*#i ŝHOys&g.~j> _o_oonn^v_=yߗz^MNv:>}qx_/ó۷won.߅I޼{*:ow߇nvi鿇<뷯w׷}}~^}۫7ig/^/W~/ۿ ~Uuǯ~Ț@>H:E`D<>{~A:{@.+_ Ҿ%Mr:DA͖^ː٢E%Ѧ;_Iv[d)Hbԑgu*SARg4(I[H}\:PeDaQ"y)%% iÀ _Ї,P%UI5dMՌQ'Z SD.gg>ʾ2 3YX:;dZ&aѳ(CFjjI\*%x-jG,(.-]a7d(\=XR+t<4 kb!0xwLJr} O/c:oI#[D˩|Π,8 GL>J3ѾbIY$=pCk,2M gr^ƒ}`hU2yҊmvB N4t:X'̏D\V 4y%D;#w& f0SHl|QŜ|3x .lInCr!x2XCG`-BKa3wmJe+*4t4`*zw @\)6!yrYTI9q g1zgbĐtFeDDgl*+耲ko4*ܤ c3S&Xy T.$;Fg u؆(ӳq촘0A0v:az`I\?Q_&O> .]}7.ib ލjJ̅e~2ZnmcqH;%̎O=ʷ I3'O)I&> (z5*ZUIh\U*FeLѓQXqhLodZ1O.ZLxAN-nK}azW!]|YĈRn)pz V J\c3|}45Ij1M2,2VF~BӢWxw;7\آKDeVuľv_)")B\!R HY[iS7s0NXNV{1(h2Q0: 2tu|^]l/:g ;7%gƟl}awRZwkyйO/sX_^&s񷫷\=?% &ܕ̐Gw9BC$ÒBiBo9d2QX'5-բJ4 ð" mOb`,8/:h~6'Jµt  ,(iB`4| `ɋ{08lHLfcsy^!ẋ7)UiK* o^ʠ[Ћi`($JRЁ0udV8QTUB'F{>(J*0p$,-as` ÙY($&lmlm+F ̢^er6 bd\{nAQ.myEfs<ӐJzIU{&R Г@K\Jnò+` g>Ҷa6-%_Yz}F! y@n40ULRE5% LA!v-(1+Hوgw{ 25*K/I}tR4\隸D!5 e\0o(t8f[K_F̴q f~뻫7W_{__~}_vmOtVP2STqIIާ|;(ЃVce5csi2rlR&@blJxP)pYR.u z?-;La/d5VzE,b|*04[6Y\) NƊ=ѧæCq"g/TaK& ~ Drs(bz IY`*`6lF :l8w+mgjk,soW3×C!ǜ˧%GW9zi<DWv^aV|g"+^g{D6bQy:+T.ekl]=]W(=LհI4Bש$qb`O0Uy{5~3RlW/R/skăךTӨu;Ձlmؓs]9A -k=-ʳuY`.PKѼ޳c'-oj> 鉺^dfK+ jv sBǻGVoZvZZIcӭDh9<4>e65] ]jdw6N02Ui@:x)# 9sz\}HWDհAj:lN'H A[71'(u9vrf>lILA<(aN*egN7hk_Ĺ婰h,0E9*/@sJ o1Q'5N7S{EVdMn$ogNQR&/gsu@3lo;>:v&h!kN"06;]Tǽ]AU#̀ ·#h =8`G86u3\JtVﭥUѣ>9{"vgPDL)xbn$ Hm9vrYƺs}:3yI\?/dҼϨ㖎)b=oR[RPRn2NdMG̓$ tz(SQWt<0-Mɯ{PݒKL0;Kr`o N3ДlXCo0"%W4W0(m WKq;5W+aOYZ?Ą԰˅P].4DRٟ`lS][% j !D $/k`$<a7T); XT`Xީ%)u49NP?AQ4sэ 捄\e),祍.AYu}%ڲ)4QnA)^QurbjUYڸA8<^JEꭳyUJ)۷a> J;V<@ %NeY>QLU匳H7\ 661 !^s'wZ@DikԮ.@쐢!1b75)]Dy,``&Wa cXvĠ=KWTAmY.6V9AY&Ԫ1xت5/PKRalLNRE!9!g8< qwH Vz邰4fS0 Hv-b,ji4~ յvt~ tīTl3o j%`HL8P"vY 9H*%eMRXO.S6;)^$ͩ3C:o:=:.!Orڣ@?h#W |r/mJEf4UEe})M(RZș+)N)ycH?SaQ5iZ݅ɘДRt8bL*ZnVF4҄"i@,h|J2s[1+c0<U5!@wkLs5D:E"GrzJh* wBтjӪ -aN*!1g1Q|n[c ܌&h+}A6ǚE)HLqW>z]!1RUq@ h$D逈JT:!|a-<dSå./';L(o$ j#Z[Hs}Ґ4 ͍5%+J &OC%NOT98rCy4pEBƥe` /r!A ϒS ΃} jVZ:,,M@Ǜa-q'Ɲ^nbRCΧmSZ퇧>gB) Rt~|?.l )|=Lu+췏yVn߻$KHx{tCcf$k1ˢp-Gw>QgM?Rb? "s|jx}gB`PjOrvI:ut^eOҷūNMZw&UweԛGsl~|.x gR\t&5r=RbT,'9*Gsl] SCxӈUn|Pr!r?,yN (FFPeT5NjzRnqEa,CՄ ;`=As p#5%Ạ ~bs>%΍ a2SXp/ZzU7L"gpLHaHnE<0Һ̨đ1lFsa:! Ke="2^E,pX<Ƚ}RҳљS _N@⬎ \F-+J]uk,h.bJ45Ke>>{T5kL. gf-bd/:1if'Xof̲x l2n[CzߍB3U>ȜC,j&krIs-fנ0re[D%grZ:%} ưgL#|zQl.T *XHf}ސ-alQBX\Yh 3LT:7h@ACB622$S" Wd6NKB#G*6Xv'RU$d2U@ۥ̱ζ# Y{*`Z_AiSֺ0$ٯY /#RmL F&%H>Yɦשe&& ŨKtHQ i%X )A#^Qnۚȑy:xIGa3ز7k9#6XI@r\su`~ŻTla~t.ˇs#?:##=!)L۫vsg,(vvsmS8 tL۞zhtUMfSVX77~fȪl5\GH쪘|zΝq`;sd: -TegV-EtBG鄜Lջi3VgdeA5%Shibd*k-[աPfm${|i;z&rGzks4>wZF3V-XVttuU|XUvm=Qڮԑ6vnNӦT6m عj" Z`kv5qA:Gz '4bk 15nޱc4uE`]{vs+:dƭ;6|0ѵl$T2@QeztH?hsٶ#{SGj6^Po$sB&gH91oN(nʼn0v+55zoZ&~\L^Һъ|Vr8JRmWD*InT}ZYS̩ I5rKқW^HrΨqʞk*u 7v~9ʁ&YB\ܿbӞ[&vj-LUhիƞ0Bh;qqV L)% #_qXs署|o5SuMwz wuhzLVSr+NԴP0E(Ty֐+Ewֹt[<K3+Zbňlp7rް"gBgq=v*935sɌaaySMM혭R=>5lɶ%]C-ҔrDA=O_1aVq'%v=ߓcOW׾up֝; SLoΪUڀBC,}og.7 < 08~4%1v<_&8KyyZ9Ɉߝ:^>J<gӗ+aY|V; :XBbpаHV`I9]W`IעOܒutI/E\@s{êu| R'\u_.yco (#uI?/NBĉSxSJ%}0߸|G'_gx.t9^>Ӷiz44\ZaReixUiOݍ_a`7|zH-0ݠ*8l*Y+a"|{oo~xw%[WW/?<󟯞xfl9ſwԲo={qç_z7w~_}Ewo'ݔk.~F.V>)?.ﹻp*|ŋ;^no>]>??>/t~_Ưn¬TKql,*na=9Qtx Εs%ӑ*1Z jI'/|$+Ij>-)D"HG#__z8ZG{")4'KtbO ەtK:9`p=7>r=N) s\Er`qh2W-NSԥ^օ \cW"] Pa60ô9H< &/oV2L\&/1osm@&/\?SHǩ䰀 ӍE*=o]*Hm`!ԂeJcM4t*%c'iT*~= 8ߋNr|MbMee =T=~ .k0"i?x}CEd_'; *VrT@:Is'ҍe'.;FT@Um9*dLY>@U1gcvR/>Z{$6~ DNttY-鴰0Yvʋ(|09]0)X"}^k) O{Nq7u6M$^9W u}|$C6ۍI^ yzc@qca.a]MU殀J2wY#U>NXeb|0`:i$j4`t 6  !Yɤ bզIԑO@>l3+[1J,M \-:jtP¦_o*@LQI||QS׏Gfwy$G4S;b?k*2*'0RԎdwLL<}ݎGwz\KWH;D#u&%cHPҒX ؅ӝAqƾ`/{ ,WdnPرOg#Н&V*}]Ʒc^4?SvpKHYu٠:[a[RiF-ؓ0Bv[}Uӊ \[qb3$[X qȺ*?jHXg*rmt8RpDHĞB}o{oMFKza#sM2ҕ/^g R|:ጸ:]F|L ,S3׻љ[mΨ5򢷣3I|u>9F9PۛwY&ۗi_3˹|_HmG:a){&9o/hKe{אK!ǑXSXl 62ߛfv=!)uMB {sMae[hhZD  go[`PdVWm0ecr fk.s'&"\|~["!]x=AQ<9n{kFyt32=eyoMIĺ@ͅZ =@g_\e=vHSm`QkjsԍsrBqB.tbIk uih]2=yfY6`aaj~<y&@+5"֝~xmuڼl;Qrm9ڐld/趬|[m;NVd45Wz }9d˅Y q [R%G+uKm@Ô*I6}.f=;Nx*N:6~}zaY," x]3KHz'O2"֠~%۞LP@щL^s'8V!0;wuD5#c,qx!8NANٍPS``Ɏ%1lVHR]0 (dLJXM&B BlB~9QhٔxQ"uQRRe"yFۤI|X$dhƤM:&aOJ`Z9UH0A]-qTǯa)|)Q9@t# 2o,@!v`#;a.+)Rcc5a!ͺ,yr! J-Vͱ@?N:_VUIz_bw= ݒDHqYݧm'Y ,.Ԃr,YE ˁXb"]8 깛 =㸝2w7f!`T:9_ MU@CHNq#$-7׌K|ã ܨ] x#^gvODo[L3<ɝ!ʵkP#ԛЂPDir,eѳ2.d |CۙeXp0A̦晓$4Īxd^)b/t# &(:Sgl3Y >hU}xS燏ަۻ>~xss{{_?,ś]p[ w_~㛿㗏v?o*Qo\Ӳ[CN82AهȧQB 3 M]Iy@q$ fTPǢ0:g)^(26Kǂٚq}!`wjHmHKl͐ (hPn D8KX&f3s|f-/= 2V/qvPHD[P6ܖsS}b&xLh]wl5R,J.2գh١Mb$塸N h^5q>o jW? ˷lΐhI(󡳋n,ͯ9ߖN8Lu$25-,+ t{1:fcEeyUV;.3H'y9WD/!?j\H1-v]ak:U 0Ȝgwh1ћ&(X%[ >aAnk#~  }s 7"$f0:lr~S  ١2p i T1r3 *{Z.4hI+Qrs$pQ8_ 5 4:,m13d2P6uKՎ^CMо< Gl7[nA.R+G 8Xf~$=bHɔ|AiK'AQas-DbM+hmI6cg &.0f|Ĩ!W>aTn>>Q9;@Rg ٬S]Oj6|f >a+ Ҿ`'*>lM vt+Fo]k? $ Zp%H냴)@q{S+~ϯ_!F4a}E:ŋ` OooZ-J~+iFKyNP{C]V@Gexe(eKZ$RԴ:) LIG xx-2wl2])\ A&em._KÛHO˦ S%}P Up: gHl d dYqɳQh!@50C01p ,7*]ٶJn;`Aq [-8 ÀJy#:XV0J kf^Ran[:ۅQ^5P" w1hux)9e2 ɬ LN&<^|y9%rVGzZ6 R6r@3S h۶Ҙ$} G4YxLK¥8@Ѐ/jGBt9#5OwH ~h^L \1ˁ 9;)Raaa5xu9L0\SVX3_* vfN\ vL.8o d6`5 \ N Z2m&tj!$ 'L@JcBj# +-GξcyPR쩐ԏ 0SUn8:$ 2ЅybXo :<0!+* AY`S7.45T T("=%Q1S>H ੠\Si]WHusqa,s;-l&6D U\rTM( O67;Ӛ// I--RYqJ]X` k}J6RX=?LF4h6$(jJ)o:xdc[l &=4W$*yx`spT{W4b?̴gu#|L)Sn:*8N]y{CV*tzNGmM=Q)OZ'E327TjYZ>XMN3%MЪK ¡Vg|[? gu8ǑK-LSe7jO7{Mo=gj6Hf{~Np45BXeǣLq8l>6goXc;CU"!=NY!V#‚9ğsd6+"Ӆssgt\+hYw 677ifnPmo 6PZV&ps=|zFo~Jر~M8ۻ+4߅9w_}|7#D0G Cw/@\ϏۡM zSu$axqh91ּ[^;~ٞt R3xS-`[PܨQz.L%=9߁^I5sYb:FSFvբݒk,>\ul䘱VO7gfP1g46U$@_V:'{ imea42-JGÙ@Waih8uB6%M &(HA!kBb^(W|m"w*8`D(" &ZužUS%#7Ss;ߓ7wT@jU WbJ5Ģk΀G<ɹ45jè pt`NwѬ(;HvϤ@&I9A .^6wR4]0&@LwՆKN`LԩR{ OO+&:k5!$(VΡ"֜wI^rj#嵶`S< )@1nsq;Pd(H ի(0$R\HR7O U]n`7dp( /~9]Wke.4֠⟞zSӿ xχjsA'"8w(4'Ϟ1DIk,J7PhJm:S:`%(UH/~bTr1jL!6T>$z# F'34Gu*GG$Fw駞 }kD~]/> ,M;A#7=zzF[疎!S73\AY} mzUo6nV-n9P0 ,v-MvvY)bFf!H(i!]zwwcqMZ$㳛z Vt%hU*)7;ϴw-LLdK6p jfR?9Gf쎟ed ǘĝR2MwfRt<Z@j;gÞ MDYKw vFM[ӄ 3;C*D*s p KL2CB ~g}Z?]'I Aϻj]j_T>`Q &$njI_$˜akYKSa+Q* ,2zʣKni{yg9I"6ӚVM-gqq#7^џ%Oqv)XԈ $d)e PdIe9q vqmI-HkҟMTG0_Ѫ,EJ@ m7c0X4M()@$52Ud"a(eWwot&~jE k1e[tEl]VߐifoNJQ[W_%WhG%vZV.DDACWz@IkXTBM/xqv[?":WCFE!)+V_2懜\;jg{oI/Ckoaɩ{*JKN y6JgO+y0r⮿ך~Aóoͩgڳ9uh!Cˇ7 ͒ap/s<2-vuǰK GEA\OA13.9apPk9h(pꂲi5Pnٷe4);Ie\݊*6F{@~,ah۵̉$DӲ4w&w3eЊ1[V{:x[qYuyāQ)C\?[ͩ ,Q{ f˓ : 'Zs0Pӓ; $6 >iݱ;A4fşurko}]Z`y+9v_//0+<&ݏӑX+'FsҪ$xױDar!oKR9=C2p# }TT%gBC+]Y7~Ӫ2lG5{wk7Vn jo2w1ɠ9m)+Gl۾8NI=oL HOt]fRĚt^ (N *^O Hޫ RR,$Km1JɌ*,?{v㱏NON&+%YNr<6A I<<DjN˧6lYX` ~0drgCza,&J+qki1\IYeR~iSz?px_#2HTK+qΦ͉,IOyD,Iad730J+"8>litxN:hqƍH2NSP31]bu. DτXA HIXh$Ew)/}DK{ RM`Edaſ7 z _mjNwz#Νf=:=z|W?W/˫_߽w۫>>?{_oҾ~oV?|ӯ/_?}}eM_߅ RwO$S??w>|7/^<<<<ϟ_ysݫ~}|ww/oo>s{ۏퟻ;#S^훗||}~v?o>~ܾx/_7͏o_6*E1] 9܇Vq_va6ֶ3։gqGqix>t,żZX `$Io`:e̟&^z;!,74FXj3 OڒzNG⽨RTX!Fk$j%mV/;%ި0|%=]ϴtI_j;!EFB}@G[0w2sdr ?^ݒno(!i7P+A*Md3z j.R=Y7,}+Ly j&ܝk@%[8MLl+@1ENdohI *JkjS8N=iFkű"/Hgd.1f AΊiCf۳?r [o&iI+Z8XR*RC| F2k*Ġ8$D=Ŗ&NJO㠚>l U &JD/7{"A%)HTGT$9-3/ghx.GXZϨ8PKB-O"YUEU/a)// N(^%!jlTNpbX:uFV +}DzWnmX J6MJ[ ΜX E\~R@;jf'AiډAEMu_m.!fb%|)5x%XF"ÁpNR+rd|? 0KrEveɉ2>IP"?U!'hքρOvi \H+I2ѻyR}B/J /g1T$}%Up_.3e0=:=zZe[ϵNǛ WyWp֧)oRysurF_aȲl W*O?Gµzữ/ OKnOΞpwxE1Xs@\T=%|@F ی·Is6ySӥ';[.zlW^-}~00{IUc8ÒA^My(&8ּ8(/}r{@F vL:r/Õ)TZ8 v5piuG:im޺~J6W; I<4Z;%zd) Zk : uE8ir^>ت}2T 5Ҵ#q/VT8bZ뗕"LQ7Hh^$E 5]¼p)2.l u\[oP'aZv3F)Gծ^T::ОWyu2ڍկ ,gIGl |bbxu.&ZzՃMDGb%n}t<:HrIIܫpŵ^͐ 0_-p(0X#4eJ@ t׊?ֽsoh.{;H/qeMV{kӹ8j@l9V+-9x1>1V?T<>Łs9)3 172Pyb7ocUmXۏhf~O B~A$(@"r5=+nգ[0Gf,pZvW0]0 'Oe\<{,B\S3'ֻ˄i7)O2r0H35_nġ} ܣ.gm:Tr{9KVf`e¿SjJPn7P"&XEz'X{G+VHTf.y;0GwБ8 t1ѕyzR^bdxxǸA}e2`zZ(tӨb5sSJz8-'|UTMURG0ǦcIJu1=Cw4с4o4*ҶZf<q 0  wdCCX*IL ZbS|(PçQy[bX'xhPmSБ`ҝjs)y۲BG2sBll2E?,+?c>7`NǃÐ(~sl!W *0`H}bxۧ7Iv sΝ`Q %b-+.wF`?%l 95%c-b'`QTM'_CXˤ+;JśHS,.iOU@ =;|  \47A-|Ɛ 2!v,b%,x ,XDgAts3yZU`F[߿sߤ(E:ش'8 KfRˈE0Bj[lXR2]C]kw} mn HZ2x9!bފ%mbg6I['h/Po@X>UMVRzn[P.CBh e≟7kJ@ͺ dEgF{P?+yR$\'YRTiEEF{XW.jq؅*U$[eHBqOB2)8$|F4 IT`k`𠒕)Ci$!BU  4Fф yGJ_tܳHғ[وY,21v!?)t#pˆ] BO0Ć&o&U?\OsTu&mOU5VۼnK:8qL!'":MUIth1W'D\Jb;Pcυ$Of mEf p;ځ`]_#"[kO]E03꿨 Yt)}8* G%년712\S*ؙt".fjlA2RZ v' F&4=Ao&M,6pY֊•m&xQIjnrBc%;Ia]X$-)BTъ6 TQ%f_)sI`"ehi HB29z[n$X*؊aҧR=ȈKw(يW!͌M}:̺!%f `%d^%A['qC c19DqYdauG;΋^ Uy=4( H Rg@3X*n䁆t/Rb$"$W5JVp6V@w̤З]44$E 0eT^#mƾ'%Wה< a@.d;aNF\v[G r@(=F  |EQx2SN?zZMt@ s:v9B&Ni ?ٷ1x U84 m5eNb+IC~+qPG, CT} %RslWnv m?ql>1o ^Z 1<<*2k=yk5|,M%͓򖚊9H s39a!\j<9Rr|)f)3$_YlQZ|H4W0fFi ?>Didə4W[(V$wbò8) Xkʪs%]ەJ‚,-'%c} 9ٔnϤ 9; * H+Wi:W;, }DP ɊYPfZ pBEA# ![و2aq1$u5arAQ3<0Iһ%b4Ǵq4031?YdR@+R.OY?E¡bYNkWRK3&).>v3$w,sV3 1OOSfխU2Lɋ'dwSPu_15kǩYۤf"޾z` *PO-|_~/7o_z{}q%T#w1Sir8MU :XBDv亄L*u./FV\6O ׳fKlh&40P2>3_Y{4D4׫lh yv T9=r4#m.'v@=fn !>SQ.̓"VcS"i~V%:~MioB\SuI+8'`T<Y̺Հ\xV܎sKq_iI@ml 66$Z(z;:W6%N4=̔LGΘzci8FmPMGE 1Ph7{9!}.\G01 ^7Npt}@k> !@7H[RNci@}YݬIAYA8nW(qsMVgG9Ekr"#P$u=$TQv@PS7|ۺ0EGXLǴticNeу8v͵Nvg/뷾x]L—3oK%/̍1_C Vt@ 6{3>Ni@à33%"4:/-kkoRnW5b{M;0|ZܝK u,* bY8d:xwn#1$X3-?^8=e, (K1w<݃`bp&[1bp'pjo籞&殬AXZT-| mXF(4] ^=Yx?ݾ~ww96j{?Rqu^uL k&!.5 !:AdfhcR֠t,*F0, Ҡܮ+`oJk8 H^?_LФo@X'4fEgŸĺ+`<򸜑 o #c8R|-5yc8P(/ ,y N6{'@gH߈cYTII"f"`?eyTk3 7}FeU4\i,rӇ0ת0( چA/ Oh=N;x6Oِr˗Y |QUl*K*o`擀dTLyF<3-]P%tri¸WlBlϗI LΆ %95ܬa09g ?hZBҶΘ3 Sy&hb=B ˔C,qzA~d B+b$`5y~v&q)Hh)3!DJ99\Q6AUBRm $N;4@! ڊxY[[& \N:r+ +Fy*.cŶUOf5$*K"!XBebyހLcmtPL.T!$3Emo"5.\MK(f'D_!ErV-mBGDyi$xP>6g'q p"-آm<4+T,]gnv]w }T}Ym'ZЮ{Ğ7~}u{wхס ۷/7/xwh++8%dNc>Cy#.]|HJAeyh}vKd!TRJSbHyTq]UyuagU6enY(!w?؆;FM:?U9L 3>B骎e5 Jw\#MnSjl6t`K[8Txs{ ݫz3Qꇭ&}@2.jZ+R]yQY?IU H(a֩WוF͌D#v~v,U*ZS t|NYQ!@D-}e,1@Fv~?L1n>4_a,WhWAFt]қDwN2H/0&/6S6!sDm"f־g CmXl1V9 Z)4+pfkkQ58]VnAn1QuRtzwj*^ < =1&+=a1?\HK[B;* m-"a+m}[Z  Pj<mM5u:Q G0 QwNtpʶ@N{pz.mРB C%db_<4kE6ʠ>ĪB\aOxk:MlMx]CctlAV-Ωt:uv(GB*v8VJ[M,b VdFV*`£omAAo^:]pIVێ;$+5دn1Z9ws#ۄ((auN,MAhRw7VV -Nv*` r,;4jA"5EQزU# sQI\OoOlwQe4F4,)y:X!dF0;V53ǃ6Z? =/ ,/&t pjFHhC i4[ʻe|`8;K:1{ "„S)2&S8"dvt Q?zbL??~…4//_m_o< Cy/b#:= TUYߥjX|[h@j;yYA,Z(l Y˃D 1qf>{SÌK Vou"f_|lBC+][oǑ~/v} 0,c&"11D USMۋG33]Wb˅OEO \ppur댠 |BC{ ]g_ :: 4 O T{딇"Iut?-N2-qWe~I'V_'pizwEt_O)vcSfpf k69Yv%ܯ? ׹|] uKE++ >7ҮCմX -R"֬" VaxUdZH6Pj,$Ҁzxt{iTg΅1A*F@`\':ZNɎ7pBT%WW>#sýy| ^]_,~FWBqsX,*}Ei/xݚ*vѾ S$nәⅻ/-W_|߿˿\|˯/_ S`^c-u L*pw5%zGRmߺU/x1`(4i+۬A* U6g D.Gy`i?8&E$ Z nɏb8|3&a Fe es]cHl G[e(UY0ܖILK@1FDwӈ-$\saDlxcrۗk\ Cx[FBbq>cֳ@4zz hO $ ŭHqzF@ңK4l!qZĀA}ڇ&Q#qr%w#yːY؇bubrC {}R8J3ܨ#jFRA>J؞lr~_bKh<ΙmX`hY JW( Ao@o4p;ԲU=wSfG_? OgPu/b;aR-lrc `}{5<ޚ7^%~4k<-‚[i*AOXQK:Aq/>U% j5]*]W'p?Z%} I(le zGH!ܦ*Uȏ)+b|*T3M_(6T|,F,Y9$5Zbv$ VK#YL&xidYVsYxWU;EV2Rw'6e+7tNk$!t'yfTUP|&o;2eCT_X -aK$4O@ԯdn%ϭ5;i}CM'&Jz%b/^BpngW\#Ez}rFv$rrk^$[.8!Y)i@@iUGbVSć8CJ}*z-ˡtJU"gcOT_XTx#UʴfD$n+Y,jBd:$PVmYP OMZ -Szxy01 .//`>wT-T=;1*V:!>s/xce{hqgnK d$% д /syr^N )RH8\Vk3$IMm|%5FrST_PFbg&A(TXz0{F5Ԃt FyTQ|ҋZ$+gPlm [d|%/O%yD8Z0[6.EDĂ5<_)!(I%ũŲ ő5L{dĤ|bJcCA$bq7>WAϲ`Hb&2TU!U*=B" In88ؤ!sQp.aI17y{e( s zBw 7Pbd;TkCyr:be08*K(!O_?a]<0\Y.a4ke&-MUN4Z̐,WM1YVҶ*8[^bH`S}^3Jb-KbnILlMF=t.ssZ(LVlgMDpLblQ:h {3,ӓ$O@Z:jU%chr˩֜ B s&(5X }Xv \ , :)\OAByeK5i#Da!odY+,_D!Ô'%S啌NGQ\)`rzL:{q8%+zgRw$5M1k@+=P^ɋN-xZ`ELבˑW>L#e^h }+)YA_Ql+W 4tfQJ kV;oUBd-D"p8T#ܑՖq($PH֠L%`9c&M~TfDEz$j$_$4~:'#e's@FU Ӊ\Ee-U y X"M9W>@5UY,@悵q@Dfq,gFciƉRϩR~6'` Ib"s[78 ?.s:ıA% : ;d4R2KȹRh{#2B$3cikPy+1Yfh8%0y31YJYXL+/_( },G&)^/>Iaz+"9-w\~VS:#֘X `Uf*L+vWB8vrhQq+X1>aKq㺏)lb-WyFC t,ڶ+έǰO>6|FBiMST/C%At1ڹ>jqc-YR 0W.Ն7kPY~ RFZs2^3eg ldi+ء_"Se ndYA&30V+3i3Gf@NTrNj7DSIO NLNpx>plLMU+vCv ^N*ўfӥ…x `JUOVp=wv^A]LN&dcA ^ndˢ 3˟H :y JS%lHW$COAfvc&hJGSegْ$r[X΃hGQ>:&. 4U Y-r՛rJXWw?_~K`v:ß)cP)=x̒ Tj;dq DqØ#p9M b0B]kp.H`=-Bs=#6Ê=Ж=v .;kQc~R7:py/: ϐ<#99u +[$Q9(o5.@Y 98- s)H nIt# G]1¸Ala8X,[@eJAuw/`+\ ab7-ͳEݺpT7P{HfoD UjDS`FPU,01-p NҒݸ-"BR#(xC^S9<) eqrF\=2b+ L").Fˉ zsDmTnyyPNmN!n졫Fhgvby\O#8!=Pnt醞pkDq\SXB2 Iׂ?@]cƋY-&xgks zd&BߓL!]qz!`~j@Yƞ,5EU2JU=kƼhl7#D+Gkh*p3G mFTNUJ"GB}KD|R@z :mP[SUθ#FDJ8EJ+G{Cё賸pwGEc&K KAFξ\I(fB(60(| TU&$"A0{u|yqvUYd+Rʼa&, u . {]V"$&\36 ΁J.f\*'C s29s^_Ia*Aq+&fY6&zz#NxMڴч38%\+fͥzQК6dhp5 2 9\f )"WLJdJVWpZ2r4G 7u! _1jP&?-kǗ v;OFF0T!ʤ,tdl<T "Xݳ%BMD ֊K`5aW셗bVkP@{kQ#qZH-\$mZvl!P}e:lndcݖW/t1̳cP7{Sʏ=+\?2j3hO]fy@-RhD@eỚrҙNYaԊ,x_gM̄10-3u 6⿩hz_?O+fP4hBKtBtΝYu]x{JU9aCqvalRbv~sU& & La"gz0sQNE*ӿ[vĽYf1+;0xAx+ƍ &P=ΨeCmsDleԙ\Ԝ"!Rfm,9c?71-%uzHeSuV g$Lr@+2 ؔjiÇ%|Jc|b -,Z!N8s1WXWfm$QoT 8y`׳V}5j`iJϲ9;GeJyHIfW#d:bI›@u=2l,K`eR=cIݨɂH3Oi֥"0l~Nrsәxxs&oa&];HZ|`+al3:diLy"f2A5{>]6679fBE_-D /T**ϕ1i&Vb%(6W TjپmW6 c;3# h#0X~XT25#.~Ul)xniɅMR/\]dJ+[R>_zGl3g!X 6[I/p)+`vT/D@v)ڄayfc!>ssya" 4ckaENRe YUx|r+ gVzPnyv^pQ)MZ />X?_=Z?Ţ! 3l+=O͏x'_<,%_HXn ʰ=H ֥"mP9PjQG%<iQU NX% r֬oǀi`3$Jz6TDmZi24ؑVTn`&hxH;TB74Nv0dlE6\{6h *0 TQp5u`2BVIis s;r,PsU$yr(&Fݡ41.9# tKX=?5 /WHɃ>@Vq}@OG2S'?hx_)؄k{ gB"ƹ V"P! sKHrۍt l;@;%mTuԞQ:jopz>Wj8scڵKvNZ`tI]8y4/N=+2[\y C`~>5'ScD::r_c/C[@r*KR`,4KkRɲj)#5XwkE(7#,Z8v;X^`[2/8`u9eO,B ZgT[A50kaUD*p}tIy*e뵬v'icxM=uH.SR­DL p9C))dʲ6 HWi*APk}򜄈'^gׂ24FSjƹ <ȊVpYowu[H Hs=7l nm yʹ<-KP=초=+ܛn oONu!W[!!!%ێ$!@c2GtU[(._Ddg76N+.+5 *qtŞ yR|ΰZ+ZN @jpUlV,"Ԏ4hTR2{Yx2)$8v~dD,fhkI'G &g]_HD M)/hY(%jOHicEb(dEtj}JEKQrգ?f`d6j+Qjmw_υKv`o)-nDGGW!s&_i[B~Su;TT=uwurR.]/l֥majF,9h`ӹN8JlDKz_Tv*[uFU[=d3lBjM`rYKݓ6:no1kC|jnn8Q.hoFAv' QC4jbS-"L ^1OPm 4'ONO^64'^4'20Se75Pn/?˨zT kF=uRsa#^oo~_>wwU j-QXmITa+wMȂU­T[OaUy JgJN2,nO\&9&A.4z¦<UIp])űM0]yLΜ>{#f]5؈U#mU"e|:&pz%1ei]3^TStuʄxFU|'4kؽ3);GZ5F*v̺-,kKu  rjt0bE"8nBrYUi<[Rr_Xu`xe6MXd2@>RuaլSΤz&Jœ8zpUp7J#bFU5PzuDS9I'sr^Xa-;Cˬ,^@Fe~ɲ0Ԝ#VA~~,Dg nRY eɈ Vt2d |N*_(5(,C?*GJugLu>4dx_nnk! ev|*¯zn(ݜMTbsBtʖ\LW"f].JN,PϛF3ii eef4p- zf yPof>4=)Vv2ô%LW̘saQF> NeSm3, X$ciL6SfImY37$xV`;$9Y4 umوRʴۊffL>[ _^1#BC##]mEwnF 5ݏ#.#1 ͈vWS%ޟȰ3.'2q?mzd>3{_Cfwyo'h0Odm{ 썣g>`wϱaXy H쾼RT{ E}`eRy2$&Gt`C@(˼/ne?0 zoΗW)W~db(/}b[$aQ`/єmw)X5׿- /p&ta>&LpQEH ZsGr h ())T[IEZ J2#G^`쓴"Lz7$h!وiy%*@ܙ`ʲoBfOmD76U!.S(;6#yضf"mvZf@P.7?2ccNG)yal̇hr&Eq` i+ݴiY( ad|KacA l{LIFٙ mZ?CSo9 'h?ZE+Nw)3_Z(0 McewU7Ycd?}o}ɋW?xͫ7e7o?{W7'7]xw~a>\Շ/|z5}飧/u_xӿ7_/?|}D_f0OJWz"l?nRWš-~`amnѲIacg!StTv`fZ6-Zeʼp $i*HlIwE x2tUd78>KZrٜM;55NGL+e(^pnj8jCش+wc7|?v;`:@x_Dh"76# ؒm |r[MM[X]Ph#af-}<ٖfxD1/h9[kcX wҜ׬"a %PhKXlPF%(|'{hglHEKA0>)qZd! myG ,̶ oe@8 8n=V'u +u;-$0%F+Ht,F7b;l]31gea҆gz}Q;4LvXLF^8u]Ÿ8; ֶ}"FXHagQ5J$cPKfL00Cl'Ne\#ژ?h]\$h$Qn g ayۭ!b~f6/ZL&v9N Pd&M2xj7u+[0H n\#d}iCÅ՞ˍyn Gˀ8$ H(γ̀HOU78>G{5bJ.+#f` {ϱf"e=8&8b4Bl0Kh%),, JZk*ueH.$Nbp O (<¶d4ܐ6GИ{<{1ۀ2|C< y [%P% 6!0zgn3VHۼ֒Ug)88'Ip֦mhe1Qi:F `l^&SJ&*ۣ;׼ViWf,jOKa.49I&k$/2v4;G8@(aFb}bĜIn9GG5w_=yqǁ/zqEgya+3G̼e5S;G-%ffs@&m_ď)l6-`XL ;=XFrzđD(`$}y>=A=Gmj2+ *-jf_$0<,Tg|Mpo,%bՎZMC0,6fYh;F4aDپ)u1τ>=K>[8ܒ`='!p'='50LbODyeDGgP[Ɋ`@oy-?wHaa5l/j' aIg}I0fxy$ݴRy[.Vqf}`y#16ώ.H7[?AɆ3oc/Y ڪ{JYg6O"gʌrtOWVSA=zVWj:< @;m-\ Y)vJ-!h4X󭃠-]2(8?ٶ` K34ڣLvwAJ9č$Y=Wz:<  y+3=j3Ţ ڕV7WZkdI&$2=c@ 9@k //@cWEЍ2'uu˙k6lw!dC\5,U`J,;e<iX-:6V0tXHت9Gǃh V}-aZnh@H:FׅZ;I AfuH?p"% 飋#m8cl//n}My[J@vQ>dži h??79? f}׮~jV?u'<;0*¨?])jmΧ)sTn)NlfsI^ad&x6m*b <9qu68yOw+{"eºjTTuyU)}'=;Ebo5qqµgv+i=T:?U,~֧hռs sy9\ssyyޜ٤_e6ǿ-]vq5 a@~;ҿaIOe o?{.wJ|l[-~Vd>]9qp9 )~)G<ޱN_c 8OYuϷ^aۻOn8[ 7o8cLNҹgr䙼Dqz7:wn\pٱotJJW )MұziU"nI?$+gZTC-_[+JKb5pJTRo$Ou5.\ಔMP*6M|M7..X3Φtv:!^Ȱܭ gZn҄v~;NFRi۝=Rn e'=9WxD2eM &ٽ+9S^!ՅBfjd%ikR}E2M*6=]ofl[J5V-g\ohsॷہu΢g Z|~tq(juGP$9a^S " V\~eIk*wjԣ!O?㱭|=Wtt-6Mh3s' >T+yX(ZUZmُ&c[q&-3D/4PσVtNDT=j{ӞޯF;|PtAA؋ P `*KM\j=`p ]i2px?|z{bH_VêM{#T,-٤ ݬV k2Ɓ bSH"XC4QYVbVH!êZ"&3qp6}- 6:HqMdb֓LS~$!gdP2"X*}-s)5|=Z6ȋ!t؉cX.Y鵄 Y ' 1I J zuɃ\ CQ,vkߧ(4ik!ObrjDZ5lUe5 TnGhӅ HZnVŠn2m.>hL4:i:(WC=}%.nv 1jz`v_rdg< A>%CݮD]t߿x34TSƗB0Ӱa2!6vذ\F' jiUu9j~Ra;~+h(-®v7#!]Nf`ЃVTHf#1ӰD/@!]Nj>nB -ޤI/B;uYa<6B 6i݌ڵm0ͨuJvmde=g&"M .YMv;ּDs'TD zO Oc7v qzqܲg"li 1UV.U𢡄eU_]D@Lcs{QińN;L`N v%>Mlwsjr~u@ lҹCb=p';'r=uqk1KJuh,bY= M C::/`gL|r.!C.w4zފ̻ :"`g=bp)i,$wie ؎ݾ^d^@؟-4 Wj#|>|4ĝ}zFcJ6#*! VєTy#'Q%+8*? p /z`8#s r3/Ol- 0?g/erJ>6ƢpOWМ::`2:E󝄷6Z9thk;n NHhڊj@s+_¢b M(|{I_;zHG`1fǒwlU`XTls>To:q/mcuUcB=“<¡CώuǍ{!*an ^3ѬTCm$6fyoԜZ7 %ؽ>[J#ME#ftH>[V 0my6MXV˨{ؤݷLL:~ۦH9[7ҫfx;UlR[?,~a|>V{s'#'نdPIh0|D1O)!KnLE7Ry]Z(kg+`d/1bC\=ʍn{ NauAbl)9}zE ~*+o Q&n &,6_d̚Zp(ۇ^bsU $ (L qA-^6n?@'YF\V3).BQr9չn5A*.b@Ը7'~]oM=:(W"1F#q 0 E9aAj2GXb9ZKch\BO=Jm" 9m!)>x&`MW9 :\SB%m!uGԹP[ч>S}Ź,ɵ *MY|MTt'>7)6J@ bW ;Rj)d;`C kNOwcyA59Y Zg,Rtue_I&fjN;Nsr͝#$bN\:0b`E=@񈵐 gF ,PNDx* 1.9?X3L[AU/VBqsH"?u n4"LW޶`0~Hlƨׇ5 qT;)ЄJ5ƶ -l4y%L%1y`IHG\ƙ:}|!`Ԯ%nFKO #i CAFҘ (3"+v֊:W[B>HaWqsUBN j3+$ mߢg}>>a_R^q~W}׫Q|FMxR"]"n_݂^4]ϟT{:ױzTM{:5֗}TɁ4b"L tAD9^D-%nNw|דf|@8F=Dx(0WGf(Kzѱ{iVL[z@ bUH6ͩ8lظ#{Yc;QEp6kRl ]JcjݷjJŢᇇPp1@Lj;2&q4XӪd*L~i4eFvKG+C!Աݙ(RIkiA`p[,VЮk:tA!ԳޥJ[)!H懎޽ *8-PZi``n #ָT/մt8tKw-h Ѓ"6*]/PM˥a=}*ap;1bBQ=(S 0)&#OJg-)ȅIXpQvQbd0BG` u8}^ơC^c.bQsnShb~] 1ЄlpgihQymDĠ:lkm_u tyxJn֬A c͋_kEtT#u(^cF.%97"tAVø"/oT,G!i8aص;$:L$$4g!(hPc-_ fX&7j#0zQJ~E৘0S/UOB !bZ<|Eک m l$X)(r5NZ)Pׇ{>NuXh΄2/lkqQůGvzdR&e7I4R X&P[>QH~IcuW{NzdXhfXM! \=g*܆[ZɮbަUXNZ Vzxh`Ҹ ᔍJ֏`QsL4π kOSyag 2(6:!Ɂ ]M])YAe̒NG:RM ֠lʸ[0*RmtRsEgCH D" F`4~A5ɂrء*ZJ[$3o%pǣpa#0~^"r;;t4WMZ+U{v_qBC ;}[Ǒ3hV= 8Cc[#swOW$R i _DFfթʦkSՕ|qE3z{j,_]KKtƿMxWg{λPvw җtIj d7M}7X}C=H?7m}7~_m.~hKCu%&-"6 `v A0>S2?,~=%ՋE(t v<%WTL鐱 K?7DM ThVP03痶_b>VTiؑZR/=[!քMD'ۊ&DJ RR}ߛJ HiklaidQT%CYlTœ2hU?[0D.؏4  ' ֜-_F9 1bقlH6Jެˆ!<*U#J3ɠJ[D!bm9)4qCx9D3B̂< /'b@{3PGL智0$R!!̓Cen'hyz¸y1%vmhP%s ^)`%;(Ozبf3*½0˜0*ZR3IqRcH4Ǚ^8 sV~; @hǠㄎj7ʐD7m!y <^sDd lwb&}j4\yA֜qArr^\M+k4ݽQC2"O$ :dV 6veӋqMa0}5MS\Jzl9u^ߧݍ- +X(0jWx]N̢49O s,f=鶫{c f=ǪryF!Ð3(T1g{ f<6 :t8a{,qxtA:y1='ݔb 9Y´0-W];F %W]&%ppԿ:x:j9 6,{RP!{Q% 8ᰜq5~QkD%Mڎ)&8I3^+Z&yvj mIo Q7Dڲq$)E`ܛ-a,$b:;2mugkAK[D藤:߻ixo/ZY%Xc \AXiVl˳W/?j-[o(\\%"7/-J5~O?J(?wiZ͋߼.r;k;}@z,W¸L瑘P!qD>t%c"/JWGkaOdU.)rK,e".tyb%rzrVIe`0q`|Dܘ@yuM"B9, yմ^^K_esYR  !,;Qːb4c bd+9\\o_nL"Wm؈W$^+e,Q̴,gRG3%W4覎n:KE%FGC$@~;>v4<򇞞b/,EOxbL4.~ V׵UW^^2AUB/uDzl7$f&g4S MRv,ץǦ|a+DEfju gKVSmw"ǚĸ6%Idf]R:^!&SWeږs 1MNYAWu) i'l+A]DC Z5W aaN}M^!KKLBT] 6D9P0T/&`d""buFFщ!l"9Yލi'G`xòj(Ǫ;b [)LVV-LvihzbRcoV 9ɂVNԻ)’(K}%Uw-%jK #yW?*o3Ζ.I{㲰UQx&Sq1-@zH28>8ėe0r`"y|+ETϣħAeٺg58NP_Z@7hb Ak?Kk!$faUfqFyxA]3M\ jڳM;[ǾU\T>RaGb Bhf !AK-Cyun:_>KlpQh]6)llẳ[ͤw[ 6 O%Tq~K|y*Ϫ堖@ʗ ^ Nn4Úɋ+B*/^!GȮj87B4[$Բ AxA#7c* B*g}ͅP*a3!B˷Yb\%ؘ阣9q 8`$q\b?^zTI0<$lgICqy׆ukVr"< ,+[C~yў(,slbK4aQe`_?Ǝ @tqHJǬT}Dj}DH\Fw oeTa}'H7vn4ы.;|zrܴ0 h'%y~, sNvAޤ- wfn75+QrM]W` FL%_L#ۘI9Ja<^U m p#M/gظdU 7No-P"EGB$rvXpK3O z:vrl\8Tbm!҄p۶RxKv7nԓdrmn&m^| %q" LU8]6 Ќ; k74n\~L\d΍%2pn=?S}Z_"<@81(^M6[q@{-pL;s/JVXl(B+FqZ!{.Q2|sKJcdKM+nKsUS:ƬՖ2F0୒:1{څyWRtgWy M,|,[@VzaCHN@ӷ,`\XIsgR%2Wgz썈J:%w0ayd:i#U]v)Ԍ:, dqn5rTZ*9mК]ʜuPx`~a:J_HlQփYLP2A]i7_%SP3nq/^if[_=UL8O#z4 ᣦ{H3~g=! VniM+۝%V^M%U)I=p^$].%s\o$#OswӞ֙ttN"3LZiH/I"hAK $LpUȏ-cSa]\:`Ma9>߼Y/\Zt٧_yk~δfrh5֪ %‰j?z|ܘSڂ-].#w0h0Qdޒa}61LOTe2ƛFKەJ, ki}00[m\7 r,sp6f[8tO۳$8fmz#2ozz@~7*;íxu/*ǺI6~LoR{l45{4vS'$4pXro8v9eLA;i) 57$ =Htdq>N|vj s/pB'CP[5̄u~hJ m  wB46+rK E͢] %-,ni-;q!j.,W-ޥ[ >rDx%Kmok t~ULTx=7=]Oa9[;$KBJ靦qMz Hv5hs R ,P޷ݻ xlft9.3n~gw9DZ~`nH7>ɑtM(wx˱Ad9_bF.HG,fG,Ӄ# M'c@b;nץ+ǖjAy>X47"%s~gU&nFi;N%xAOU3`FB; ߶[ Mޕ"}^47xnO{]jo=8mqX~=D[v>f3aW"!.҃Us9lP6}sk$$ul}6ɭ,pGva vt{P\4?Lr}5 oi$nhdhfRSi)j[N'zD))Ӂhށ]JZAn΄&K6"waqn;men~JĞIb>OI|569_8 9F4;xg yPX<Ӫr Oq"9pxd`޵o.dJ7hث]6~*]xj CU3*w+|t,.<C_>f z;Ջǽp>\z5*y7XN>?m)V/(~qk2oZ5|5?ݛo}~~G|p} /#e9b{ة=C% pt坳M\>-͍œ R pxho9&KF \Rv֛ H{unwR)Hܠ8˥, WFgl4z97S3l [j]?;'DUĩ5#fm~P8o`5vfN^WY] ٭pxp7II: onRT3:luM"uמz`Ia tSH KP)5|?KHNzBAkI\Nj^Reki¨i6WPP-MC$L5R0+5(y!Nϝ=E|SSM 4-)5;t,ǏƲ ÀU5 :Q)%\'X`BdjgS2XCOs(.שcj,(-y=j$`SZAH;.*_̝{zޡN^cq2H3U"/" s`{&e,w*FB:s`h?9?+4{ehKoYAؘ=ehrŴEVzxUW"4s"9H@b 2LcFS|ˇ/?ߞ?ϯ^>_ë~#>.6$]8;HۏotT CLԝ`i1GD&n 꿾y\ɥ}+ufFꝅPk ]ZҺt{ +Ȇw",-"QWRoyjr: P '#%B6O_&ӕ6m|?/dQ m,c5"STG!3~mێܭ*UQ0B,eE;_Ic+iċ8gC*CdU}$^!_5ǩ`^pLşDADH)Ƅ`*̸&TrOGe&G(x,R#>ZP/W=s;IY]D #sm 'JLJ:ZTGvΕ5>1lnȄ d([*#1 Y&m#$?AIBYSsCH( IHv\v!EmQRIiq p6Z8Gw"$mxio@,Q(\K\=C#>wn,$N..mƖ}˳`Vk6&*hv\Z0 mF!aD՟48(F.,dR.c g=%G!r޵cҳCqddŚAE褣ytSTDE희\Nl'.^lnko^ӦƪB]fHWO=.\A&l,A[䥺_`4C᫓&G DC b犒ڴZ2gP=2\Y e$N(Xi^xoBƿb$pj 'R3#KG񸼲;. ZSTlMCm`m7=i6` 7" !Aa[xmK2LSׁ1k2$;ԙF{~T.~d4ϭDTM[7 /! +eH%$TS:焎"XVJ"C\=; n_L,GS2`5ty~B?QkR]&X+ˌB[_j9}tVq 'RaE"dIixY >6iY$N)vJ I8"[hؕ-K(o,wII~rmO0B2~CݢT2؈밎l'$G<%H! M w.@  U`C"bF#[A [F'X0nDc -דqZ]=2~*}Wx^,81S&+ջkQ8X=Flj)q1U37 e{`u"K6[mN=L,T 0j0 W"+OtV_9'niܧ7u<@{ P).vA)$#8/-3-ڤ*iMIUNeǵ%2OT`i 6DӈJhn>`Ղ|M63^H|I1Cװ@yȌ{iW~-%D]Š F8 ^v6~r^ڬֶaKl+-C O#&Ȕ؝f% 0D#RSlm@*Э=7?#܌dS'M1ͽ*S4ؚ{ ĩ+iTi77j}o0ڬǔ}9We`f9=YWٔ Hq/i-:9_J Y*,0-U{e6#R ^+RL8 u2r1 3Z DIi議Ð{GYhSYŴl>+?F㶖TlZAjǷ\"Ph?fVafUfJ\1MAUUoom?m'E~~hOb;s4oKC>Lb _/ [?eȋ9]VCJn@._=;5Jς.=R( CoE%>]-͹Mx(lZ,,rxVWX7"9&^v7 \Y*iZ/π0S¡! 22yc''&;;)׎jsb+&kNZҐ*ɶ)\蘭D}YbV퍘ϛ`pcVbA(c;?ǸO@ATii 0Zx A,Ґ[tK{'s4fTMAM8Z \ !_7wlULw,cX2/$9<.5|xlc5$NE%FaKCsԿaśh<

R#lxW9S,%ɛ8wnc2sa :溟T%¶&49 V[hfmN0>r&kշVF`<P-ey>2+VlutVlngybۅ $.G*MMͅ/_iUtc}G-X}ij::i?ĝK̈)y-X+eUv0=Іy|[ґA:"|-@\L:hk tŎ|w jHк3x `WqPgχ)\D7vr| ؅?_!QGH,@~Ox'@ |߷)K+3 'W9v\nilk"N+M^.DBxVn^,UND,7 Ujm؍M&>q2-Օ \9ST(t@Ĩ=ITPܫ1o9xA G]CS佅#f񬅑%_ 'b"Tom&lCs-ɵ47-n7Z*#ӌI.1[+: ƞzWN.R7KFF{*8z~jneeQI~6/MpoVdki0KSI@!V_Ra -!s,(&\`Ht $n6}~YVC M]Pe#0Cm4q  ŏ_YrJJI4zKaހu%iM{xȘn'ɳ*U%Uj -oMi.VMwQ]w\dȄ0) 7$hu=!:5? }a!U X l k `(m ڐ2Q}6| ,p>yx5LRTjΊ(Gr<GO0[ٸ f/O4ظWN1'-$2N uW;jĺ8K^6F4?mxeE^iK(WaEBdh6ۑQI6)$TvIy)զ^KxReA6^K&eXla=xqU T5U Kt_q .E/e<*36\MA7OBߺ'}2{]djq*ڡDTyqSٽksk:m;=Q?Sv3z FɰN'QFf=ֲB43R}dX;Is",x S"Ζ[il $.qs 6t/N_oUVQ*%ݲRϸOOƨwTQ-;V'emѼBvxF2NDɎ#O^7~/x_*wcrQ>!?"~8g7܃Ln?y kcMڕeA?翼~iد??7?@QK3L9"NyDCpJw|Y!n`ө>e `7< o܌lX:v 9%!]0כ39nT?m=X.3NZͽv>!Mɣqa5[6w2CsBh$aU5j} ծޢ$O$Z姏o9F&L)P+k'Uӣ4xp<^#;Dd㧓!R/j)ƮS-P瞤Yt, ]ɬ.uߟ+ \njH6Vm"9Ne}};LX)3ttCFf'(θo:ΉvڸT*L/i<{H1 wCulD629|QMHX?ڙBC].=iq|w3$`CQk#ESLP ejIpiǧy3=TstW}X˯>/_+qو,|Y"˯Rn0ngBqBuu6,m>I'ꒌ$,Fszsʪ[_7g_``QI^~%eA/yEW!ݠN 랕Yٳ0g)C4De* [eIX 2/)3YU-ĵtT{wH؂n` {6#C-X؂ ~(KRJW:R |oK .siQ-^X+XK:F%[ Mǧ*gC9iqOeԈ Caq/ax fl|T%6@!I+_x@Y;wRiMY4mEAMxLu"MXc>4.*d : E %/nx`X'ǾLF"b%nt;zAA X;`3xXTr==T&~(Pf=zVpP7,x8|E=*Xj풬|#ugX%e\(jDw|c6Eh"Ÿpwg VQOTf+-/šMF6#iӜU"nYeh$NEvI @ sL>2mab=p۠^%CA)WULb_oo=ETN^<g/kO}_k,ǟyzï|ۿ~}R~<|p'O?>_] tJw{ᗧ맧۟~|}ÇϷӇ|?=.绷o~Ӈx)Aր|ݽ?o?}xwx囯E7wo_{/盿_ί_6]o_=[xA\ݰtEҀ]P-2ϓx](ϓ{,\]!:Ϟ}I_-(i'À1 ]s\"#s@ПG|GGa#eG KB%9N0;\ZNkmٰBJ:t`n)O÷FMC`[^!:~{]gBQ,0_mTTJw(5bӅAVZFukd+!xdkU1ZO1g-KN yBCB/ =E7O l=ԭآ*,O'{ek5~r{ t)6z*[ghdsK+m_5PJ1@WIPTѵu.ЇuϓwC/$_F@PyO#1uxm* t!o2ߵ7*`(1q## IsIn*QruؐGz+bIT(7tgJkalɭKNC^j eچ<2^=Qwlq6 $UGp [FNAOtAp8b!6P$"eA#_\ (}{-6q=]H mQ.laܱҌzZ)mY(sE oWzo,ɒ -ԃ?nd-Zovwfh{eɯ7>^4s $[jq,Ѧ# ;TW ︬Sz<")?ٽq]Ţ]^&]_ב,ȯ3Zui+rjx=mhd$gYbd\[E+Iؽp=2>;JBІ<:~oJd[=&q(g7)e d?)_&ݕY3?̳ӳg׬^\䗏1rTD"o<}<]?~J?wW«.wa?xx 1oQ7)*DEGE:u>Bn!#GͭMoi44 34b6lTG.ky>)0@#U${\[V76NjfutϬIYVYF7ݚjm>7ˮރϼ`qȀ[ 1j Qmy}e1)AalT+3Ì\ z?؊k 쏌L"tFLRR+Q%ɡ~|Ql3f44BAz^NtmʾNIN\{Zd2'>oqw2Rlhn9S)*ڶ'N9$ߵSn_C3މdBmx' ~ &94de ϣE l6|nw󝱨C{(reԵفEY:mSvV|^1. {mиDdSV ָܽ6쾶9j\"qT4yK#$In ;h"3] VU}GzO/L~ 1m![aE;7R2Bz˃~P&wD"2eV}v܂KF2 UDNE"XYtH mm-RfʖF: C/0׮幍 זʼe5zۗXbm#kM6Umdm]KvF 1-*B>$C */ "#R2ėlfI,Z l8+{f`1')ێRDÌ5@5vmۖv:; cfGJtKt>DP Z2}Ow?xq&V7*}0&`u~kAхG>޽ŗReS}c 8#We2cF3rOܒK&#$]_CR._MɦdZǪӖz|W=Q NhYm T*p>شux54$4͵.U]֚ki4WIEPEkgANGv2Ko#_e,샶j sj|¬=(0$ ^EM$v9iś+EhIqtC+CL֭ ubH\~0n3Io'BԻճ \gTi3d ^U$Lm-dSؠ,ńBnmŁH,:]z45'CW1k0%g4f=j>Sk+yMR;HU[%KFSUǐoo*'H)0! [(*$1Y\Lyx:()Owy878KbF1ud.f4MHjPsV]BdiѪO @pt%5\uCl-q,>YSmC&H۴Dc3ԕ0blLZO0[%3K Q-rg+ y|}3V:=H:`Ek8ls G9>7ےC _ԷT[>6ϰ zs:%IE76ǂ# [nSr8HA>vr ړtIB[qH9*W-RlQ@619xR7e7ZMf,ӟQJj ύK$\ѵ_JJ + T)r9 ] ) ո(*%c2Dndxjp0X&SdCއYzf|2a|2zᴭ5Pɵ؝vΡI4yMR/lpIL%JPN?mph}q}1BV.ަ_ }-Ь]÷5)| KS65^ )?Ҩr/} Uح`:  sdI$yc}P 'QF8z0}aFdz{H͍|dJ^\܌js^{48<3dA}źS)jm? I1[lA; LE6t +Sq\(R}jkqHP>^,(AFeDX,([Ujl5ҘѺ8R[k!qMp;G Q8b/JqKTݐ\\H΢^Rj7 u.* HRʡeYsY6cߣ2 U˚ɿ:=ss䦟uMgjH7Aa\:PȋDb`V|FuB5,+q8SMygޢM9c;u~9yno0H3<iLf'3[`gIJcg GTM{7MD:d3њ SR+s0'KI[tɜ(_3oAOi!U1'9pӴ6?ˤKZ9v  &ܹnDˆ5V~҅zRMy-jiob&sǶ~VF{)/M" QKb {~7\$$Ŏfzަʉ!u,^@<+)sĥ)-zPd/2mp#*c&}1EPK\lƂrYr7@+cw ia2`υH$[*BRJeM %8&҅I,[gqX. 9(u>JЎؽ@G솹SR$̓uJ晥~V-$PeVM9^7Yh Z&R( ĸx_d0_h3umFی~Ϸw?=7xea4uaTKq FoMhoOWޘ3Jze?_Ž-mE1O~}l2'p}DE}4(M= I84GR%,0\>cVƩ}DľӗX5IB\iG|$: ' OZ(ͤ@(0tNM+24rN@|Ԫ/L9PRlφs,6c|K$i DϕW*rQ9=i|<2b)_ B<6pHnc4HA;B$>#HxO M^8nx6A'%yNdx5U|g_M !QD&o ~0.Uԥ FwF}I.QӬ"݂hP#p2BO$t (@ =L8 `oӸdu݆sk9~"tLUyWJ 䣓 41{o!@trqt./Lu\%ޑfD"X?Z%-[ 婕uR8=;L^3(~>/X\G柄C^o CO;D8s]JHd@'aQMN͒V;Ӊ(].Vln48lxGTX 2NF"9TNc4ҕI0;H.9|y'*}b0B6T#ߢX/]h݃8"1Ro2bx*ϓ4@92s %:It Kh m!3$C +h 5&CQ?=8H!Юq$;tIȉjw'`h2gȦ `iGFxuB\uAi^hM;B +lhTaJZ#͉%W?ux!5ׯ4ΥkJ1kCwئ* y)|* |nx( &ΌJC%^ q|k)CmF,U7hVh..4XKF4ZD*s>CU:=yÍ9' gWI&-.kF&NB5%)(\@v95d {FSs4dunخV wxEphPW k&U,]bn"[ћC"(Y@G6>h,ت lrh0ɀGYi((DyO.lB|22ꒃ|gc:<7؉řvq+Pxb#F9/꘢ 鋼 &c7*S2ȑ9j)ڲQ!1 0 -;a)+?b*sT8Ajk/2`Ԭ:bFbbQ<أXV.\:'Aoy #,ɾo;H.%ٕ{U{#4!Mff5C$!sp%Yr[#WKXv*KՎW-HHq0OvjVźQc@/wz AP?yզ],0[Uݲ;)8Ramg6+% d(K_g7펽3sixAtN<0邃_U(o.cҪVLI~@ѐ[Geg uU73Gj3jΧ>*`N5 $ vV> ʽF(*I.N'n,d 5.Jl9XʖtgK2]1gŮ \l9J("h}sQzJ;?Ufm`kpl3=mk!ܺW\5Nx8 n"-rv(C'GfJ܇MZs* ,TydoSnSJm .&NnXiZMخ9X 1 y>&s39״ʝxE]#"E\2{Hǭ,˹CvV q\{PaȞ{εL &IO[KQyjmSߣGy`#&ȯ٠%☄ Ts*I*E56ˣVvCp,6ߞ-uf]\k%yx"{]O ej`)ՃRuL`vĜ-RSƀl#jqi4; h><t9iDZL2p'ivK0&71ݽc}#~;xKN%Ld[J&-6 sLs+,Mex̆%)";;%#$/TB[X.}>jMďv'8v~u]񨤩 : 3qAC_N)M6+JCcl_'L76olѓI+0,WYvWnkHs}=gn;:h%VCS}!Ӕ)N ~Yngiƴ1ۄRx"[]jwa99fFJ&TJ UXRy@]2p<cfNӓ Xmߔv4%ele!K5ßI* x TtS8UOlgNŌ2_)}FmΌyLxi.ٟe5rkjt*3'D @3lM:ة٥$vR2ggYj<8lճV_-LsL*f޲1r6讑L q4D`e(#TĤzLӨz7\QosPUxVs 'c2~\J>$EQFV^U,*8~^dPCg<0a0v[BTT&,{/EľDۍg0Ni_ z\O{14']j\I/i0,S]D 5mfюֺ 03ǫOޤ*wFY` hMb"6)'u2`qqL fĢʿfJdG,Q,7 Op++}K +yjPw~S,jZ'ac.ܨ_M!;\Τe'CrI!jB\'v9 \␲8 DʁV*5 ?T)FN:KG '4[bTn<}%6dJydzqȔn%Èà"Q<R [-1 H.T`:m;DX[f"m$pwI NznJ;$`du^nqA& 6ŀ-yVd"u"=u覷 $pUyq 6X+_k1LQy$j>_> 釿>/Ue0FuQ"?⯮+iݗ/ #nƣKQ1fV kja7 $4mw!2>"s@(&dB~m'Q;/ D:/g3H,/Q5{U?xo߮h;qd5%=ypjV^;~7aRqՈI(a4SYv=ed0$D7IeS%aXQN2|k]& gc%zWsteeym|ZCTM6aHB79f ݄WCR6/NQp1Pf|iـ&Q ̔93+NFYv#ٗ3&MQ/u: Ẩs#ߖiΖn[ȫƻg;-p(ܕ᩸ZusrL{u^u> ̶c{pVϵ\ k >752&`.5:8ۄg4"_/"n|Rݿ://͛ny-|@/Xq@Nxr{`|hl9_i]6Hˮ=nF(wn3mapޭZlp_}?a55oH-w;HDX?,P |jFj6/TI?k~fun6~!wlQkLӇ2mrH˻RȢH ,`\ 49B(QJgO,[l#Y .>-".mWƦ~pyɳ?<~/?g[_~/q?}|ϗ_|o_=ݛ_4nw?߾5:ƻ__?=o?hݏ|WҋՏo<_/~pH|u(oOճo_7Oݫ>||o/zݓ/޾}&w_§w޿_^x/^}߿{{M2/oKo}ſ^?ݫn?\y_/_gN_IϞz ץ&\L3x"QQ 7"2!C:  ANȯ(N#:!M{ +_l27y! "|6hkOM d5 ԇxYhi"VLL$ I2)81iMod zcycv5`h#[TUP,6څ$UF-|b*1)ZO$p|8A؉HoE/ʡF@K Xz2O,&tT d>{V>iT4z; #gmXyDԅDT h.S!LL_E +*E}i, dH|#h G KfslWG_@9Vjph5hr ^|Fa֑s^2B́bp^!hZceEtձh B!L#KM jA_@^Н;Z]b_4%,"1ͽ10@u_X[]/Q"XX->/"@`"%;yљZˆ3N&10 # N+=] zB>J>ף Me+Z3q5D`nεb0xVEͬ:.uv ccuU7Ǟ rȶ̉X4CF, $DB`!sy u W2hG ^z<+d 3!1ۇE*Oc2H-,SqxKr9?O'ELng'1KsX`Mj"j^yw~0åУpC$r#r\1ig aJ^Hϵܘ13q)Iotl|rMbe:65KѐD>CW<V:3e&aƠ_q8w}+^xu(]IV_iD'w ~<]: 'O-;&AY$Ҡ^rLK$ɿ$mV?鵖G'REh*{gWRi%=+KM?&fmd^RḠ'" ccQ]<*tm!4y&p2٢7!ɳsޥ ZLe>| $?ɮi>İYF $ߛ f,/\F L9I pqwL۷G!7Ѳju t6KʅP,Vx\8$Z)1JATlp2'$$QRO)˜ 0@gĦc(DMtf z趘d#nXC"Ci"' VxtHw2 v?ਔqq$?燆fa i>K{t)lWl w8r@HRl1ͨc['6?V+uK'5=~m'㝒+)8ef׉* :V5#zxlf !'@z%<=5z#nщ#n"rgVڋphJV14Ѕǎ"wFjBѓM@Nҽe☾[&˃8æ Рy*1_(~46U> 4k0@oOjoXRs*`z@.^O?(c4x R) rU.fM٧aF+BWWHb%l] gld܋$EI8S p$fF`Dup1аo`b<'.v#rDu `~h&s{v)u2hgi# ؙH?-(owp!oiPl@5 /jΡňXhpɍ"@Tykp)_&PV?Ijqd*BF߰`37*>y<ӶdBm[#X዁dhm됝cZ/. 6^.U(vQN&QPh\" f(*9DWH@X9o2:LQቂC~I9ɪf3`Dߪ"fBeB+4Taɧ$G[(eTێZ(@fmR&჊3lk>h Io-"f%Sڑ'd$P%8NgAɄ8ҭFUu *ޚ1DhV%U:d򴚋1Xtg.la{$FQ?!J07Z\@_U opK zLr΀JY|{l yl*5p@z略Vy*#h\ []HEx\JěRQƀrpuAQ.VR["8WC ԗ = =" 9_DO 5%TjH%-]kAQ^6JLAOeSSJ0XUM>Lg(R5"c;[4Sq9dQd\-DR/kw|$6䒀QWKa,2k5]66J妗mCՍkM1LT@!,XiyP˫p"yߪ ] GȀ@ ʏm9^*$YlEYRm5rv:k@fEE61fL3bw-$v-Kޤ'M0)Z1JPlvA uprԦo *z^͑Y煃j ŅkՂlZL)Wb) 5) -G$ʛy|Q\J)<畘⵮p5S&4 EhCan*r6*VjBL&]- UMQ!Uk`+}(&bP4$4ECPywYNܳˬ.KxsakVq:YƸTF@Oe%,˼$u3ØX*IB &qE$oxzA/CCS_7L\P`0 SR*:pQR߄Unߑ-ʘťg-ItI7\!Y\C*mOM t@H0RSz,,1?xB.4ފ*jn.5hW"3@A\VSV-keyc"&'_>$GvIj,J*,hCDFoVH;PG)0]9tE^\ ̗\cVq⛮QY@*e8'kN$p`~JɦՇ"fMYrGs׍Z6BWC8o߽~}SR[v,:e~<~6]#|?xdz_ϷC/? xO?o|￾ׯ^0)?/a bٚumuFؼVU4{`EemyL?v}R^yTJX{.ݻIetKQLR9/J%`Dg+%Ct*ި/}oGϭt- e@7l2&'d i_0 =g-){[),wUs&_!`{B1oyUlЬ&^d\BB54g|jiI< z}![ jio[I'X\Bг #kлT{B˨EYJ?!]%]h %E]MP_pRϋf眴 ͜UCDW$F9*)[ ^6DHiJ:&KB=j/5;̓jBڊ^B'^u=}SWHB'8Nzi pW"_n_,XǦkBa`Bwr_B0{0,x/!iXꛔ|tڳM}ؓxRo-&7WJ;=̓e4 }Z_1||JlTR/ZXT!}aEuk9 c)ΠESTgDqc{_Q暑Iy5gĺAzRyډ >Jpطw8Oܚ|N82䌕3R: 8%h*vӽrȽ9yo)a*%uQ=PsSNg΀u\j4g"U[S|NPMl:c`s.Cռ]R>CK ,چӶg/hdfԜNIv)G8\ 'D*ZK1Co$YX}b[dOðj=fq u8<conkz_)X]m.Ptm RFO >Ơo) *qA j{[i01Ji #={)SIcasoi7Oh+^ ʳSB peeH)0\g }H3t}=!6lma$!;f{yz"x-w_<|8m~ކs~{~~wWn_?2NZh)cɟuΆ5;e3qgfd# {fdԦyZ9ky>kiew-[b.mξ騪0_\afSֽf<t痮;BPːr=z6wπS1Lŕ540rгW'L觢Sg[qttylO>ӺI-x!;2["F4}'-&TwRv;=)\I7db;OlLo[p6Ku*Ɯe+:v}{戎Gdbg\ex8}Јs 45B7M8g@tR"uƝOxj![NheH*}:CR-AZm;} jqf89/|(V;8i-Za{J{FJlrW'3o wBiN uTpEf;C#βBjOOz_e%0}}@B}Ǥלy.6JP>v`,ݶ@z48b#0OonΜN# dhgSǮ V9զNjC+[7yΝ9=(Ľ -{ P "YS35uNr=tJQ eKX8@={X. l:h,vֱc#OƆ)۾p_~`MmAm3Y3OD!Ϲ9#dؾp2l>dZlk_.M egh_8u]'5le%+~҈t:8NŜ7sV􂝳=@{D.ieԸR|Zc3{8]^J6T#H9K3Ekϕ-ǣQ)2μhJyk4!Ьc 4٨ۻG1w#O`3Ɵl怶=ve>7?!Jy⪠䐹dfZ.x F?bl9_wHdt<^wz)-|W׉apRlf( O ˊMۥ wyKD'aubC<'GlkX[7KfӲq >2*сa8{z6#ayr]d+:&'//3,5O[;3O!x4˪iBA2q$<7(b/֡xtÉ/(Vcy<9s񟸋a%<KjcB-[zXMMǩ]b;>@gsY'ӽ k4?8:&l܌ǴQ@GKOzx?kB - CWB /g:VNa,K>(zb"G &Yn+ZoQ lxLǙ@h[3 ˭7JN~kI5qvA'Kϭ=گ~5(k_&+ ׼r[933FxglX;}Uz#iM;4utSJGzz2SRe5bv\8]p%UtsPΦ]ɴ^&%[dj1W=TO , xH4Ce< Z6£q܎ASw &S4 i2y7kq;=&"|f>jVq-]#s:,Y7|"-#X4tA&N5+19t'j x6xOFT#'I-#'e=m̳7_=޶ ßVL(_#Jgh"0>:DfTѹYn#K; . |6/As8|xd9U c2ٳ]'CyQ'o^Zjۂn2~ڔQC5I8p&MW&t-Hgy27$ilm*FO")Dl'NPMB0 سBuoxՃ7 [}&M.+!aCkѭR.vT>b)˨bk_]'-ؼ$I:hQ[x͙Vl o?^+V(P}c19?/0rɆnr V g?Y6LQy eSPĢ14J1o"b , 9>}ڰA:o`z[/k2̩}IB|hZ"Ae )D/nGRކC, Ć~ƷeC*G)S)%=5^6kd:$EL[}S]`ț~/_O,J,aZL+[ds:nDCs-W45.,\"{[ǥ4,rOǢ֥H*hQTv2v<_tA!@S"ńHA}r M58TyrWEۄ"d H@u$fNF x,Z-/캊3q`\HGfLb筬"J"A: #/k!tCEM?MrB)a/ɊPD︐X0j#6򂗫bP_+Yfly/EfJS`+|3p¤$7oZTBrUٚ',0mؙptۓ2;w  5%^i<\L;r>tqV"n/]$E{FѽA/+fEoU |p3;И[b ݓC80p$#z2Ph=Mh50;3a$ؘjp,C1{ШI.LIWuv43&$v8XKL~]!dhDH/-->~hZ:ТeeXM_vHk٘ 6c( ~u͋|~W0}eud2 ?ԀB@]g}Nd(2%J"rpLj6u63$8`pݳ,iK2cpj*x4DbjfpJs;&Y˱[j+J_OrfIz@&+c#.6̡i>~*gs-CI),Ȣ'64kQ^xhzAˑ ̕<빗Ǽs.-N7?SζGg&ļa{v>ANzxo_#uݚĮ4k+O?F jȻ\v{I O?kbζ >AIj1 7.1SJ4e .Vǐ5HJuH: U5~h6+sI5|,&pptW/EP26rc!,nzH\3u ȭ0L0K+B:O:f=lϛy. r@]B30XA;ہCۧێIv>y'׉:U&J:ۓ8Z',YTqi<~H~gJ E-"߮C'Jls1'fỉUC\e` ^*3ud +Ժ-۱2n0AzBݍkub-yxHř^= ڙ= +ԼtQsr8wݛu(7=Z=54T,ohysk7-ќ+A}I}AR<&+,kV'9imG#gΠ~E*:DY&G2*Q҂#tHpԎ}gc 0شIvgȬ,͡V~IxzW _ۧYNĕ"J=ߴ]pn3(qQq}Y9KaE@)!&D2q"kĆ=%+qHy8uGv+&jIR0:3s{|AңG;tB e5ne:"w,۩\ /2Vg .L1{دG}| +<eV\ŤT YIڱ8swm~#XW:p.Kͪ~7wD3(Plappʧdž^ W.KYzk4HH]92kѳ6хkBǧ-$ :o*T8ʣ}*i<8]fUz9,e)ؙ0;5C 44+j"۶@ԟw7vk+N/Qˋu2"_ z \k׋ЌolDIq3F5dcB4{}*8mՖCr;g eT(? IIkbdtATŰ;OdjQm$ZuH/ Oǰ^ oNTAe!q+[/ &]i;>Y;<pے˭'L 9uDG~Qp lPqB C}pdB\7qŤԛ&^A3(󝔇ζIl ʪ3-:cZ4YOZLYKYgJr/<%u=5jf:ON)5뽗uj5KO@Db֐*?(2ZUDM4Ǧ?$ac&h98ތ"$3{2IK!IsYkgB fuXJ6ŶCnPOZL<ݚֱ,lՍExgJ+?6bW(6JÞf`ؚn"/gaB-Z؍2 wOy~}hɂ7-2s* 4BAFQJǯO(Q7E-bkes(ЕOQ:IQ?Yq ve` (߫ڮ'ΰ,ypfN@4J䃙^d}6rNC)_W(e87)UTG1L8'Shr᱓HJ 8Iu} BC+}[ƑyNr6Ȳ q[< 3`K îjvW7<8b-EUL7eg-ߘqK/Fov7o%ٛu7Wڭo y޻l]~|3W^f8> Ob^?v z::u,[W}Y7m[~ qMy.a<6Ob]`՛`ܶka< Yre2{LӸ~R>-,t` | \LGk @uJr@!l ^Oy_\O٧ o͕3)3ǥ|1$ZgF2S" W;ā(Ò-?7L}z㋧D%pxoxFPO&DO$FJ YI+ 0?mTİkA,9I}, |<'@tM#zP͎1 o5uo""L QvĞ r I$taa6d² pڧeAERo$j$ba:/EЁ @3 ]tNk7r')wQ9?잽tb E_|K;޽1^'} t]Ag&I`HEmw۩;-S@8 Q]lOAkT(%:j٩ݺx>0N] FIݱ* % (fY_Ʈ-K44.@Wن́ jQN;_Vku5t?1};#(K4 :{&g{z,9Ÿ31@U-O/~ջ׏\ޭݣ'?_?ɋg?_wo]}|/_ԏ/믟;kҋr7鯯~_:k?>~zsó/|o?}ݫI{Ux,o߽OޯywWWOy7?)Ǘpˇ߬oȾ䷿KO_~t|ͧ/ӛ߼O~r{߾r{w}믿zo?|,$ȓ_wѤLU|*6#ߥe~TooFE|OO7u4Άu4L` Ç\m2|FW utw)Knp'?C=ppmun l-΀EGWlB6-ϾnhKa*!RQ㹪-̴8"o199j/ą*u eT17x ,jݾEXRVczQ<ZB$9^50Ö݀!n35Nd 5J`NgQ4^ԬS,)jF]ć#ݴhz}[جF(6T~,6*ppJI_%yXT(ֲγA2dOVꁋy\t]?PمR" <ޮQuو.?u(rsxtţ$r 9 i H> ɡH} 9%Z{ ~_)/G %Wo"y=r0#x&ܽD!ͧESʐAl YB}e@FMܥ3"ɌC~ LVTa&%%1fQT Y0gCzFX2t[܏ ӵӖh!.{,5.Q gⳲi]/aZ)L]M?/IxJ &9|9iA.LH% A=o8@|Xr]wƣp."~#DN$/A pWlcc E?՚ڗ1L6e 1gA˙LVO#9wSO ̅Y-iĖhē@+i#7!㐫 \HXt|,V4uƽ@TMkF^kC)мTLRE#~8j5Oc G"SΨ@05An%t g6pLy鷢f6%\[21ƱNAhg:I [:.)c{y[x" G-š5 )hۘ#&J1X}N7I;}7Ũu t?N>.@kճ,x=ij2l'[˶a00&w㊛qg'q:Qeq^\ԮX!”Js!`?NHa}' |Y0؜*ePepetQzvnR8@P2CHNfx)#(d"HxF-# o/HX $X\R0k: RqA%˰jO$sO8ȀXvq N@p"nH~zsrHU"<"%>#4xpЌE\x.R]u_haTgyG˒P[|њMOex jvچX Oqb#CW}JfqS%9դ&prQ&I3 ((W=5QU%ۧZ،ZM]ĩPUjDϥ > ѬfDJL6(Ir0cN q ʽD6Q7Tv-]f>ɯ'-Wt{P@hMt86uqMi|Ip WqS\wη/s `\8iS!t5BR`GjPAn+MUɑ@G¤ؗdoK;jd*&JC:hrM^{A$YVB\@faYAzC~iJ8!֥@Fih?ӝ[Dy^=&ADRhU@Y-B.`2WO6hHC )xf6sQB=%:RI.h4>4ʈd\{ f*ޝԫ7tHTc`\ml)҅3%@h "I:KF5`ub5<VoZU#Pfن8i ⤋aٹ-^#z24J 3W95*߰ ƑHA >fImp9JؠS[]2͵}&.ckp.B\mXĭ(+.@>]h5B+Q":Q8?gBl(%)NT֐iHK308w6*yH݈1$B*H%:LZViDiT41x{@ӡ7(Am@JY#”N'KsMfy3@rhkjN^C[&ssl]x !#vE4R@܆3WfYͩ)KQIݚqX3Kccwa2Û0B,A`@Gf%> X"ICXC81Ph иr8:1t0xQj2X/T~/P Rˏ D-%{@7aDh;u)q$NP 1s/<0&{e$ aRZ$/ chpKrxjB}`fё?iTjtFծ(2┖;rIUSfH*zHAuq#J,Rk%0]mnʮ6 . fC/H]:T4ѥĘilP?Y?m iǶBk8hSv,؎hj%K 9$%z~1T*C$B# e{"`„U] eQ 0WіbQRDOBvGWGamU}TngzL;T Xla<[j#$Y(f]eM9$ׂ+VJmg(WNmt!6NOn'I_cjQi4Ud߫rNJ|~0S-Vc UWemѻ\鴭Tk'IP嬩mpd5ԉi %ZjYuf{*R{.BHvyYgͿBb|1R] }x5>/z^9zy>7?~yo>}ꧏ?{Ir1 lU9$!o7 u͠yv%O}οXI߽KtyzޅԠN f0C_Dž LkO3Sh53Ϩ)檶;n,RJ#$RW' 2^FdqkǕdrhg.iǕ%u^!tOmTi3%T| ]a7i}Raؙy" @џ jHN:h>eWŔ/1}#49*q\mva q eVjU(U{j V xhշ[%rƾˆ2!4NQyإzk)flp}i\h J' +^îNLM̆q:_n}#j<.?JGڛVlx1$~Z]11}8%rV8l Sa"u<T}kcxH,d:#w \WkLG{},oڙIwu lD9ij_K"WPq ]*r䷒R W@=·݇a3z=gv5=g9mYjY;Nb_mDx>ZJYK.0J= ,f懨H{MTd^cT/.xDE/~Ũ׍V- 5[-'ƨH9a(!J49D`%|t v3P!]H< tK資EiqSgſabv 0& |w4yL\) Iil/ Q$[)." J?t5# `7Z`F.HN(.)UE"&A@m l0_hjZ?},}Q(0ms⨋Ac# FF-Xòt=|7 ; v*#1-_h,tf:9 #L#qQ{KйΑz!-Vm+-s 𺒞_irt# 7bcL@ff\!y 7z COYt=o,.y"#HB[ņˡr9NFF '[ }N8? ibt|,ީo 0|7mGƾ~PX$~氈9 0 tNxP2g#0;ʖtw@r<.&&Kz,ظHlHx̧UA&}\y1H!dz<SL!L"Ba® y%Q*0 1Ra4`4(+=1y!}\d* 2ː9sap< EXwa048..y(̓"aEgτ뺅E"/:!(DD >~u"0R?(;"W"CbD?t}ykv(75έY=2.B*LRUCK*0Ku@P0?ޯk}f|%"4ĻVNDuuK W;iW62Y^ת+ޅRqhCQ]^Sc4tY|Ezp pUCU̴R񆭳n ޺*Q]Zb.H0@J/rߔ_ 7dm\7iX5Ђ0@e Dҩ4 >Am[ pFξCicGI>˗7Є1h^1 @Yۅޛm쨄k<܆Ԃ0d;:?5a|هc=> mM9 v+HJ5,"baX'պ5Щk# DA5.lH͟m 9vkDwmrz$Am5OYl{hR ]+?[gP+\ӛK;[te]Ɔz+ * v H6<A%]@꿉 L8'G|I*`J6櫣A&U *,leqT4ZZ! ȔBC'][~S*^؆ (<1۲< Zy <8rȚĮܗBx*; kѹ:(i܋Ś/G Uq ?h |+K‡xqf,_2~r#eǯiR~k|ƫ>H?~ z(h|/TЌT)_P<|>%8 8`KoH-kX!MISrZf0#C?7n!|h/iRap .w+ї͟ZLapm k|$b3!}x<#UO~1ᴶSPiz߿k!L"]уXؤ Бi 8XP *\ }(' U-yFγ,uLįm8_c=yU- sq2STѳ_K=hm,TԦZ=pacӒ~: $x!:j)װ<\GG7ZY[<J"XI٤  u/P U ]sE7}nUty];긎vT5/1$$3lD; ?/ W7z 0Ēp5Jb=`|&P6x3C. $H8X}o^{"Ó'/ӓgϿTųo~o_??~WwW7o'_ܽ xˏ/\]^~ճ{ߟ_o>]^;۷\^_{۫wWIawo{?REЇ27|\})珗w_~{}wy]gk߫/߼z}+ϯ:v\8ZIuLr:&\;Kb* 4DZ3Eh9¾D,؏A,9JNVw/9|>K@H i)AosB: {6F@x~K] m&Mcx6Z."etgl$3jʮhcSFcT 7!@ӑp2#M';87& OJ& X&rbSd&JXB}yZv-g3ajbyb]ax A9,YS:1`مfjj6GxF|5'"ute)9C~?*8qdj^QjN)Y2PlrNΘy MI;mU_IQѩ)a(.iv? @H ,XQ؉ .!cb4؅tZdVvxCb C4 A)@E!05Zv 4ȗ]BX´S' 1X-]X,Ba> _`L;*QXA ;0H0/͛<>k{ "^>\` w+fQO# SI<(0fvOiZ#**C aqld.riwð)EOa(hTLT@{WD=%2 aS"vI$: E?9tn>hKFMtUI;l>=.@*&e d?3ATD6SS@CVp24IG&2P;f h#E7C} Y+0RYI71on!6ZѨ$, z((Id/'x"&MnW$5 DS*1HDl.\ҟ JrB$ !X6VmrMrp4_oxS_xOjWYVU![%$mp| *уf`랱  k̇ \KCJͰ2 $1VkADŽ؇eΖ6mhvc ,UQ*71`b)32E.&Zq! & m{ SI@ɏj;61NڰʼnKb%"{ 0f3t f ƥRu."OfpD0;$@EpW#@ L „ÄF61g)zR`v@ A pr-(-ʥ@eq 2UvFsFn;G.P_:H64_Qq7*Rl$K ɸdK30Df-X\T3 t@&CR ?q(`_}*ɾOicSG1ڇ1ބvl=x@>7q7v+_8f`f C Pkxx٫P.5j暽[xP<}'pLvI窹V%cB9͹d2W**B2-uQb*c $F)B%H5022%0;L1k7-afe)58z\+V0 QF*3D$b$RZ=~' D+0UN$ UV h]gA9 )x5X` ζN"'`EZl#TUpP^m)۪h5.PzPkքNb""}r胲 @ӪmhV5=ڢ!"&vGlUq 7Bcia%,q焃)+H"JF0닁ph)S]E/SbJG {A&byrY)NDD,3]2W‘69LtVC :+T!uEGɤc6(i#+*9a { "f#j~kgPUp6gp0뎁նv~-wDŽЕy=l@sd20N ORD5UӤ1$;IJW9[Tpʑ9x& G!ru(`` YDE.T7"`ŵxх iJbChṟs`pu^T@$vMFY]gdU/p1)՞ĤM-:00&C.fFbsyeC|֓MQb5VX$%BND9Hm{}l LDJ2^?ŖIO/hX oJ!yᄡĔ:C"c@xe&u;f*s^RΝZml}N?]+^5D-eKڏws.O+BT]ˮHU3NҸa1hqn8ly8C8Q{-"F,Z!&@^aAVgيzʁQ!ڷ*zLP0XA:K/݌tH_X9咏H%8>61`t4:p[%fvWZ,v!HD(-GT&(ɚQ[nGjR7ts~*e[uhgi[!0NxӝU*DW߮MwNwvg.lV TZ6s4%хe8*f:̌ZXN`YU ohڒM*v, [%C)|xYl'Ų4K 쏬Uv׀8>r˖&i~DFo/m^+CͽOb)ESJhB a{ģY|pPZaRCL-y;l}X-TܲrGPmSe{MV¸!il\Vgtl[]!iּ9!= pu yٽkz\{̒^hk)NUY7;_()[gvڷڊ%+L6qa[RȨaǮ2G=xo+׳]6˦II+p9-9ےbX3DuxVmL< $Mv8 f.M]$0p #=)RS玹5APewPp:(2w :CU1H- /dAR^rʡIMɠ&SAMۏ6}B,tkH*@'UNb^G="MV [/p5kFI&/Z. \m+R. dJGe>9U&҂cj#}3z-$Q$&+[QԺb4v0Gk 5--mbX?",HV'arR18 V,(~6(\-BZdIo=[t Ӄ$zR iEۀaPL?z.b‹ ::3u1#\H]7ZpXHoBC-}[7hFG36P-jkw\cV.yUj ԏ_2$#xLfYYtۮ[$/.g)y^>S,D>gcZ>Kֽ|&zL7ȳWgi|<ņ'?tAƫdAY'YsƯu Vpzg+ʜl7UJ7ؼVV h=mҡ7[Go9-M+{daS|SNa:,Ae[BpnۓN=uzOMUU>t!=ob"-֬xo*! o5Xn¡s6 j]nK*A [NZ5P^=6 x{n@tGU0D i5ָa ӶV6-y &vBz Fnc@NJS[_^þ7M#mM8UO$v "g&M9d z^ILx^EP +%ƤmX K8o&S^ek :ϊNC9fYaP%\^ld wF#ݰ^_O!j} k0IlMr{IaϸILQJY1,`rO¸=`($mj)bFdjEQ@ȼ,1fy0mw|uy,aH፬$7U 1\* ܯ+]Z˿|wo>QFJ''WO^rK|q͗⤔_j!—?͇on߾p|_ݟ^=/!q7kN z/_E'W7_/v~_՟߇?u'(-Zoa^F_6h'?ׁD֓%[J#YuQE< ؞FAl@LNzvˊ.SiY -t.^݇xA@v .3|ᩣ,"fF)^g8ުl.V{r6=XyV/y N lI,|޺ngt`I8y }Dd\|UO4~PjW,y.Vp9§H'#WwxF(FΤm ? EZYḚ%J!H`n j Nْ"7a <ǿ={{ *fˬLj-KSS8&? Ӆ}6Zdݍ6W29VEW( .|+NSq )>ϠXg䰛$e@q֖-]aLT{.v @4 ܸO:p][td7 q&M?-m9RGc`o|,@l1X7G!cU2ڛ΢bbe_V5hO+/WP>u/89)/?^g<<}Z˩: 9~O'/.Z{=s2R]\^CHFe0:plfZ.0Wl6n D AF16fp8pI.KdEKhK>0u!%K#qҎni*@/6[%G$_x`/zplV*}S_}juȝQ#WT!'< DkߕcY:݂4Qg] FmkԈSMi$ZyMMG`@?ؤ0*»>1BL"J6B8ʓd Xl^ivDaSh,/I,&̄8Sv#]{(O DBRV.>_7Ϗvj4M5s#t636'$Nj) =7RfϯO &EV8FWH5| )m#*#Y(#|)*#fxƇ~^;~6! 3p+:D*%MReX$Ft15c(\g]0̝;/٘+JOZ˜Й:uVU2 EX0pҊ5نpv UV7Ih)`<(r/yjrv͐ S`%ᰔf&h:e  V>X+GA*ʛck4 eXe͗-8: "T ]4a%yX~栎(q7|C>+:%DBL֊ԛ&Ж uM ÚMF崀9nAEфE,b)Gָoe+J5k5eipNT#U2JpmN 2jsrޖN{Z iwJ=`:sBNA=- cdLdQ|{sw7n}xﯮ_>t0Ûnp]}]w?>-yx{_ox{~9W_?7><뫇 =<w?~}w]XoO~&m_o?~x_y߆}}ß~xOo~gǛ~x dRDp2#c+;cc섺"wz~:o7  Y^(0 <06a+Dpiz5j%ڀv\klZN܂4u\"q& _$0JR=kcL\4xk B`?Lyc6y IH%;L$R 1W4ʟ;@m4`Vsn#*u5=8+f{K`25Dv9t9o+gz>i  T@tf*IcL]A$zK p j`tg?+]:^RǃM(J\작9+qh '~D;ga{ko![c5Ġy<#ԷdXMwb*E#ډ떁x.U ؎HC(NVSSmus:' UE@:شCQZDfz )膓M$R$Y($,HFj-&o!NCA}Iu dђ4փjf45JeF69:l` <@&S 4h/΁QXd4 峊H $!|ვ%L©nN,x~1̩ʘApd=RT }c>i#5ѓu(o4":.{ n*Wܧsb7ˡH8&#[\ RF(i yQt^-& v@=K/G}d _hH+d'oY YL&HI71 N\bt^a%b|F: @²$ ! |N|B O $T7$J̓RLHEd¥Mu !Bl+&=!mz'pe2nſ$ !\SRe &!ׇH8pvBФ-`&!wBi \4 R8!?I4Uƚ9+~.+&ņ:7Uێ"`rBBL)yB`r9le˅;poA&dqpSC88 s}S!y4. Q_k8 !E!!\EcKh;@KB q?0X_uNcA|3 5L-d_Z[k<BJ.`z(JB +Zq2ret!!4Q!Ӱ !e@DaTjSGhB(n7_In]wA !p}Sͅ? B}i䧄tB`bh!g6AnЁmuϓAEwF8:!Yg\Sυ4* '0tQQΉB~>(+J0jiTrZY E!T?0O+DX%J уgHMLtw7K]s^}xz_E`C~W9ۛw^w@~m-ه|i!5j(ˠ9o`gMm^ 0޶hLU0~: Ɵ5JH`BgP8/A~#(&=/EWDS%R˨vE&IB,!q,/X[ژՕ#F_rk )YxSE i: wmM&$V|3<4gsǯPLA%tnY^mM$L_KH)0A\nFT-6NM`YuFЗH \hPdk.v\̫!Zwnq1J#f< I+VYV}4!>Ұ[vE흥zuQϓmܟfl E⒲/x1#$RQu*}2C r4LQ,NZu\K2271ůFclG]+ֱ&^\LƬ4I7yLX҈sF TTBv:qKCC#F^ sطe 6"uI^5 םu:ꂿ dlwze2y>S筨K .G%mvTt~MK%i*i;lw+8RIZs7* 7u"=}ne}8iuMPx4tQ5S9bFϹcRзmօUhV`c1>6)3t\G^"0XoFZ4~cQ7 {pg_Y]zK 鞳Û9ȡZ&yd>wWyn vE5OSZzin^z \C+!qf= _9ӭ g-\fW%-L#/gsPTIM|HX4~E3G廪:@/b/ms@P\# HBcȚ2 ImAm'PԨ602N[|$D#`8>r(5kqɩAۨN@^50Zlņd/؏є~"%{_TmX=<]M`*A;;l~$r-hCn@ovg%v%oܬn]7jS|֎HT $UHs ʨ;1bXŭ՟~J_=_=7ږϥ1lƋjV!ݧUҚ$R`7#AT).o3}N헪"Vcp0[bci o'"ql$fChAjs~PG&[SUỪ\makӍѰ<Ƅ+:de{=1Ḫb r)?>Ic`Um@K`_*S19sZ&1SZѯbB#DSK7cKً+H6}9YMlShPSLEt{k=l:B~9\BqSL7iÖas.zj,HpHt (FkxXLCdIM"3]vy]ˤAaq#nBQwJMZ%gkb΂s! ̊6XT+@ˮ̜8!79> @-6ف#\/8HP_F%-"E4zM=o1=c)/Gb'ȑkAq8ldXSuQ^tԔ+0*(7gk-pY jK_sǁ[ cQs !c`bt݃XSY؄2.$?2p:Yl!jXiw6!{4*-\콾$x`:ѳ4 v 6OXC"R_jq~TL60Sa$K28?R2?W!\#i}UqlULQ\4Ahn$ gj3u).''BSaE9'sm[ LJfYpC ps6wMq=4W\GsUN (ijE 3ݔRvY@ Ek42+vٕ!tn[3`0Ws.Utʥ.Lq4Ǣ>CBtxp+; 1, ggY0+re[k׀ q3L\Ht=0l hm'j|Ylw4ի*_135a|L|n>Om*d#%CfIqӡ";4PY'3'p NEn!դp p-.29orK":2'QLժ9w gD=z:=bsXY/mkp6T"(s0-~"A .&_QܐJAϢ/YZ%omٍ̨Iiyl-w"Zj7@enm-W0~p#fl&31u4w>I8# ;Ansi@e67:`Y:n Wz2 9"\*xJ4a'㠆>mE|фS-syߜ'4uq|$#@JŠRԴ P4:4#A/J-dēΆSɃFMB #b< 㦕I1dbtAK5dʘI4RcI  q48v3Q>΍!?@8rP'`2t&@+NϭMof+$riZ}ֹrJgk)s^1S倯sXЌw2u*2`ƵRӹdXbkM4%%㮮ebLs0T5ŬYOo'wKB̑d$?`ΌQ,im]wk+r*}>SY+\Q`n(;Mвю5ctd)ԑGuᣞF`yU}rzrEگv`QO;@W_vFe|O5C3J-ZrM>Vwio"n $YFyǀ7 T/X>Xp83H}6U35Gk-c3I.]UN;Gs"{qm ,= BC4]Yo]7~à}̝7Htv4=Q2AêR<םLDWYOJH>'N:`N!N!X=IIx܀l7?)  a Rg(7CRo8*u>5ce FIIaxp>EV /^`o@)<8Ք"EP\OJnq4x5|(rxv|Ӕ kA\^RܸDhӚ "HtG~/sV֘x''aÇt\4rSy p@w*g%U!`UL#>:~2$cj^L} *.S0⇲^о)Y~h ]VxSI ʈY7YfBҐeshR^6"zP CxR^o1aG*>TA<`|7H+au8-"hZӑT5I-|TYNĔ[U8lu2 Gv(:ʦMB)&o0g]Fp$BJ;sC`~($H*st*GqU=J9c\+ m# b_0<+G*晼0P戃,OH*Zx23UXJeU9I#j3>Z(N@Vm4Tm>+Cn؉>~|z}}}~to]?Ҋ/R,/RyO/ջO/߼?}xsw?z|J[}tw>=ܔ/˟ݯqU^Ǒ?gOrs{o~u&?>ɔ,惘RGλ^![vdj'Sֈ"ZqA&x Zd愸^+&O|,T|@Vx!Qɍߑ,ˣ([qZT}iglI._xx ~!N@'Gn%h .[ikS| F3 Ӛ'WQE+[ ġZ _i.u-/qy cHXME@Ų RȓcQkmD <|?,"\^i<|dr$a3Rz̓8#z+30@P\Q͹B‹1Unگ ^Oe<-fi%>!z#x5"?("ݵdpqysȻg`k ̚Mc;,v ]tCT.mnOX+u'IG_SZa|A3 "eM5̓U˪0VH[ w`@VyTo)oG8(ОN%!.8(<2khCn6#8"> ]+H}{$a+4 {:Cz9LŐx,(QLfpJ9L[Kow_ɼӦYuK'ue"* NTBX`b!+ @d\u2]2#3da I:8aч.Uk ,4 FpH$y}xҽIep؉ӵ0s)[KkeFQKǹ]:1-D<\pZWJ0U%L`u3n"; N!0 uy<LGHCc ,+- 8x c Y!v-ރ-W%|aT~K"E)Ed)-L@6,aM,Љ^! fGmE!CҟLZ%k<RQp9`13 ,"&ڎk 0miaTЅZ>C 8VkUK(9H-DF)$$hN cAw)T !V3:X /Ż2Dp y-K$8B`eAw^6KyM!QkP fBLH0 FVL5Z0Y0NW;j(ªg ]}\'Xxɼf];Lf:t%MD^3Ӳ2%y;7ڈ=ysg%D(/ik8d Ya#:ϢpC4&td G]d#*:qIRʠHށdō<98,;>|> 0(*H ]?Rdpp]:.Br& &f$10̹nN*4"8w ʙז@n`%Ia@Nq@E,ۛrP;@C|ANZ(KnŽ̵Lnbc 5s~$Xꐘ *A7sb;ZZzlW\Q/*J1g:ŋ`{RŦnb|"QA3Y挀d>kǁ5H*AQWN/3 d!'NQ.kAX IE!#'hQDɤq8 NE&int{:#:Sb`F^+˨Ly)\bKG:WI1`bDҶl-==-5krٞe\n E묖htZ>cmRTxHR*PɊ/N3F@ok_E8.TʆFC橸3hKgmSxP1h5L>ڎdR5pxjTыԗE8D [ !!WV ;T*ZM>>:X]Ӥwql_eR*v\* u4} ҡ}cٜ<1O&N۶gF7)tbPEYRa* j PeD|AF<;x@&eNl K8c &6g FMfY2j#P`=^7ϨdfT;VDH+ Qj_=93c[2 TTTZi(ETSy nEc vrT'&7H.5u5`=MKG\-pn&%l95H Yb倻\ƞ )|V5g07BwNF!=Q٧t?[Us(B%CNFf09 v*FG 6Oj=$p܊y32cKZ( \f*6%q\1x9v@4zY5d5VuD2*Gi:ȁ4/uf4'S# 6m7Ŕo,袍 定A"P8`F$#"M|Ǧӻul7[I8F,&%~8z^lGȊ@CCm0y(upmyPtO8K`dp ßÎ:C:Sx<<QZ<<*4/!ܦRm.\]3>0Ԋ\en e8U_3ؐp\cTF(##$ LҪB(rρ!?/o,3lYp64pgR؂V*^u0ˀ*(T/ l笩 "ɚszseAF_-#kan;et>FXі袁}0D:uRHe&-+J]8 /-aiY;ꕹ㎕µ-!bH4xm(R͔a]mÒlYFv办)l]~dY0:t 8flRMe)>=3X z#So](*P}yoԞy#&ATPsd+Zw=MOhB٪< VDoS K:W:Eq mp4V\=V +nTR5G u-#Ɲ.L!m*A5v+٤jxjV ǝ\rA9}K7Zu7J@5eI$Do> tce'ppj_=g邖&tp()rBQ+pϬmVM=S[щG𢴖aJȗdͼSYt+&!Db$ըgM^܆7Ʌ ;>}pesZgXj%jJlaCrU<Rk8ղCKpiZQHaؐjI\4kMt)yጳJť'hẐ60Uoܳ b!Uu:!kq.LQn(M7n&fm#z:lk;\b,[P$د:z;煲2=Nx((5շ8>)nj1m)Y &,˔)S^ T倮c\9@iȸr0վ'[3x>:fY4=㎄eΩC3ВjHo=n9ozfڌV8s´Q|? >ȸITdw@OlIeJEΘ62W\id/H=~_7~Mrz{%z/7=(`kKX# %9J*'u2[oI溕}>Z;U:z 4Ma(zՄ4Fl XH:rv7r)f҄3iV]cWt^+o 0XܿPg1/MWX)tV2X۱~l:wUJ%eݬ^J/KWvX:CKZhGswcn[-尨ioxu᪄-Rĺ˲Rqz@JUOwsp zovA#z.k&EkS~5X* =O ^)^ dbTGs1Ogq]coց_мU{-s)NssD69n7(o2(ɲ`%ZD8ozgE qf ԀNI<4Fn#6t6_a-1K>5uY([ ՠ)[a9zV38 mpJNH%jv(LUzZfsՎ)8KwjDmh |2Y=n-TzV-54^jkݐІG=Ipِ;Ar09W붊nS.eYɤ9Nu**ks g $OwNCL$v+D5M+-өu;- LZ:M"_=oH^7>w|K?_Ws۞A9VɻՋ'R~vw_^?߽˷^ojwxa}'Wn-8+f(~/scXv`v:ي}w@ *ml\[g%Dϥ/rƨ7F'v\ ,Bh.c a;ܝ\" &ϊ4tJ6\ޙnqY(͑WYhcr95nB[8nHϏn؝A ;:֫YM phYar2l뎝vJ)g@6E;gXA+k5+Wa[^sN$5DO;ђhTjM7|ťd8nyݮBVuДC*u-LM%,`&18O6Q\"`@jW25 =GH2k`[S{V 9~@x0hk+ϫq. !ʻ3ZRssBd^K\MTastI +F0o߿.%*;R`i /+fEKvF} C|*Y9ISɖ%U"&msJ8M"5ה3jQI= 1wVl{]DM܄4UAD2ݩ̵W_1#op<i{%¥FyQQFEuRWʘ*pfeX[E`>Xfcȥh :V!yFB&Ϧc(u.)0w< lj`6qCčQ!`ͻp ԸSc795ޭȻf{|2g>,}F[Q_?Q&<XQGy zA*Igvc [Ǔ!nΥ#$4[SƳ5uy=Ί n/#:hRl,-*MM1h[Mzgyy <8^Ifeˌ:Y ^u~zwZ3Gu Q&:^S.ߝEKd~PQ~ ͫMzsD\ǦrPGQZ$оjJ` (/W9 ^#mzqBɍ8ܱC=-\2d56ϳJ`FrZkl9Fv:]ѹݵA{TPe$LW^O%jyj#۠א-aLa=Ί aNxK/ӭOkȗXL?j[h,Mi|NZi|2׉4f3 클5tRoAɴ('$;+J5w7:hc-"*3` p*/:} :6*9`rvv_G4q8aʡ!e *'+6`9ћ]<8]RMzM {yܶ.Qʎ(NQR);4ڀbBϛT&E*_`p0Zݬ&!Li7,|˩&bsrV{deaǘ;)-Vl@",-@ i@gvbɧD LmT``ɤemډDi'(T߳Ή*XuX}nD<?`yxYyÇ{ioE^=:yYn~{/uz|/rS \N؃O!D]%4%5%'=54C,˔'jX̌)qcjXPxQZذVivY@|iZWE_ثI`P[]X>,Zlp }590kclC ż*G0U,^&[LɋՌv"t%5pPc˫cg<3{`.EMC"/3ں nV$i5Rd(h eY\ NKtg;*-fL}k(kol%uo%m Fj\nfUujѮ1̈9TeTZe-VHT:NĄ]z!Ծ~)6|"Yb^ԁK]>Vet^ˬ4-M F0)ﴝY% 55kn,QefH7jz:n+;Xvve4|4*uʘ;ӎGAKfTsK2ƸP۰ly(5fHUHRO/<K3۠)C-M"gITUfЛHJN*d ˖u&:CmZaq,9uF1Yᐪ0y>.Ҽgs\p+׶'TMrt&KUREG^Uo=SXNڱhx~f%)=y?zي9q=K|__177O4~0z~v%t;7CsM{ݛo??9c|V<0#< =b&pM^!YV F19RdU_UQժE(V(GS <NwW$h,it8j6\RFrM,??oB.6+<΋+^CmRQDqĩe0U8)9r1( @Sp;"e!i`hX$bsIg@sq Re*PSHj 6ǔ_+V' P1,ƝUÕ-݀0΀l\fjgXyieyÂ`e1@CMch oH .ʜ(B.=p"`M=)ee.b ?Ek&L )PL7鑜i ryh@P/vt=5<2NY Єձ"hs!oE=,Vb2< Ou5*:ٰRbOW)I$%v Y<`@!b9ˊn-Bc\M /Լm&5Net101&-6,(=V,qD<o pYG|t8z*Pn!-f.3DP"E{o2"ҕs-E(,ޡo-X{ۊW-%aR󢚿R$9HZ(tOϯtn$01J<RӀYxkl]Pz9P̂85w02?3BCk,}YǑ3hܗcdYGMݱP@n?~2#rSy%rj%2/"U]E^jU]3դUWGu拫W W*]e2_jU_\MgثI#+<_/~wW2}SƋoa0*&]{ONcJ4z]!XqM"7LԄ<4+@t^/"~oȨtuLI_\c~Vi2jգq.^ҸC,F'#>Xi.ÆFڙOے^(/J$Jy>/{"V$厴ZCWXWHD`4N;k㿸:;"S"rGJqq+*F!f&$* E_gu!߼6O4ByWKy뭵y4+Ȥ<,T`]!<$j9.T: YzEH?&,#-Fڽ/#+pCȴ6"/Hti%!9YBZyӆ8P`ޞb60iLA51YDlXmډ̉ιz},l'#^'Ѝ:ʑH+ЩNB^L|b8fii061ȫ)C伿z2sMb* -*mU* $*y`LŠ2dȦY*%f_ &}d.*Pײ?- dGLj#v.} @.J[y(vN,^+t$/6d!a݁zxCVi. x`T*]tzz^狖 3Hhf^V5O8b0] L7=4iȤ/>ݢ@ǀSyLYQ;\>:gOw('*}Θho8V OUҪrSH7U;maA8IkxiYҪqhG" ;p6lYB&_cYLfN'W#05(,=BS2+6&'ծ:u['-e=0̉xEfeuNmHJ EUuFqua>mr{8y G auax웣*Bd^̼[6Txwz%d 5X[p6I 5WNh]E%I +e8^4zݓ~xZ?=Ky_'?ǻ~ͫw}ų}N|}ϻwwJ9yëw_x˧ۗ|V%~q_mtx>Gc4xr_?9/_O}o>yݫizxO/߼{7>Ox'Cݧ?Շ__|_~˛p^|)O>Mwݧ/18Wׯ~_?|s>}WQZbI07B8Lƀ7XPo#] .ED6oV&"|Sn(u\yl:l]6a xlXa ܦ InloHvIbA rC:}›aH )ށRnHr#۫mrVlE>esV5 @ݧٶJHi<8 ׇq._ߗTMtKdA1ç rCXd4*c^]Wʖ @U ln׈5&I`atlf]DJHٛc;ڜÒ,R>SYaB}ښ,$:~r(urs<|ifdlPuٜӝt4cYV99:5QJ Zsk_rYaֱ3Ϋ:MAfҶ궠s0V!4 =SЫA7よ6-ihjYO4Tf!\]N}^i|yӆ3NGgR@cqim)5!ϸ%pI|[L *e1Ot;s&ik*Yuզ+sm5J[y=z ɶ C*o0m8Dh]]9sS)qhb5J*@Y}jaDm%S2ɚfSj^ ܠ JْZA.GZ,2> Fv2il)vI/>P] i=xX"ң;p{{D{Xa}2ZB|BL1dnۂ'q$KٞFWtqu$7(X5.幀S,LVHuQ] ϘK(ɐB;nLePҰgŧ%QƮi8 `2Ata6SƖ"E)Yzm6 HNXRg&[m\5xy\ %0*I`, }u̳ K}5NY3œ;vzQ.i2$.֢0Vʜ3fLGgs6+3C,]h1& P(0FٜcS0:6u1bă4+ }Υӌgs_(**C'f!"#!Xò:}Z2gNכ{qBLo`ofI: dے1,~N*)ܤ%OlL,4˜X~&`2WӮh.<4Kgoǐ gND-@㸫qD1LO,ʶ CS +9((< *z!Ea ~V}L)%+%q]͓izQL)Ԫ * `*onۈ/ymxU38m̠{ 3PDpxC$r%a(4EĢ! _,_k8Zz Ghshˋ>h}ciӅc^}]ç7m,:Gc,}}-D_>q%% wh$cEhX-aOjPtYl#LsSfjgֈCr3b0}hǨ(q\MWłk v6]I!;hP EWkUQYxꂲB8 L3aBLz]w`A놄ݓ*F4Fa"sb?[Sz(s1in@w» GAwhIN<>w_j&c p1q`ouS7&~Ğ_"FA劑{f3,Q0:YiܐL [;aumB-?oܶ:kP)`ݨ$S8ڷ&O-_/ C7 )*q~sӍ@.)--NJ*S])Q4 [d+H.L+qt&2NT!5Zp:·WfjzOͿYf<3l٪E#iC5`Iڞ7a ]7eѠvp - \M_COa2<\n`[>ps˜=lv(<&2n~LFMz%#'hW?WaOK줤 ieғo3 ϟhTA4j2 6+ kQ }㳢i6`<_ ac}*5i;MR߈>P1X)Vy(W*)᜘w˸BL )rOȒ&C*UY,~҂z& oV!h vϻU44TVX"qq+3M㢏SШ* bEsh/+ZwѕGހC㦂ڊ=i0zYcn8K+ɹjifP3$d񎴥|wqHf[8`ap"H%U\%5zO`%ADwA K:f/@eK\,^Z7 [r[V7<]ƮҒfZÁRK!yXK%!;sMJ M+VT1.%[QT3r*Ty(ÖƚY8|SWZ%[*b9"CzLVSkɊ:M 3 R;Ib ԜvlYԶjw1h[Jfe{B,(@:- R2uJ3WA>Q%=X,m뀩4|4(vm*aVCf1|YGIJ,A С$]9U[b-Az|\Ĉ{EDB( )sf~'i n2Ǹss %;ĺ ~6OJ}>|"7u/((nm0B27٠rڊ*oaCR/zh4G<$`;+ѶH[8Oó |Vhb* kYqb'bo;Kw19Q{)t1ГD cXN+ZaB~L&o7u!WLw)5f2kōpޓ"ߪ 3Zd<],QѾ)qK2c6Nڨv{ZfBZ`$ǁaĈg >Af{h `wW37=XvN:Y1^ S&יCbv)WnI؁N4k+16NZ(^b]S0KbF/Xroxz{R|CCʽ><hn#`\ (,N܌ q 2m px1WT8L7im*vRK ƂC1wɜpA4"G:j-[Q2%x0(_#}ڵN[4m.Tu$8<;)'BԖ<Rv mU߮N`VάJ~v ;3zB 0P UM7on9lʍ2A~̍}iS2-j 0MZ ps;V#+tydf4h)ݚ*01Uv X듳'QiAFL'MmOJۋgг˖V pI~m¶sa= BJT覞/6m r}!#=% 9*!m"ny%x a+uYpm ezyjզ;f~z%ZWi]T~:v:`=K~JWvcҞ;9cǒe7/Rq$ #15$Y.@n:i[8 {bWUTή3sŚ-iP*Sz5\뻇%i¬֫@19 Q{gffVk[> C6оTtP,uYŸ:MJT9j7@KE-z 2S{]Boz#,n ž`"*RNpU w@A{(E^$2$۔ glC^}y&IFZ:\cj"uӍ2Z4%i uL:CJu6J~p~5ĝqw~~_ qfI5g[8Ūf])*[( O.[UT¹"y T3ʂ\pÓ>23fZ,(쑰7V<;-Uw+Ă;^@ Pj`˒2̺D|Ē`_tsL++AI+Ū)66x8x%5} R9%/]Ut}N @fsXduu%Tn Ҏvi0إl=cYxG7& WTCcz1QQ|1+0C4ก’a1adD"_]qQwV)̈́"$mAɨq,n(deIʭlt1t{fZͲTJv=XtRyR1(JBRYCc]J7Rb,m?lZvdqSX:v9%;z߽1B>o^pI> 5]J6vkqͥPS y.PX0CϪ;7U" i6hqsK[59fH!R:~z`1 r*K ڪ$\[]yCߊx:)fGiΉ盛l6*h&6{ir{ [8-q6pah(x>i>iYYHG1Kkyܐti[<| 6k؛~{}Nײ4]͇S:^ N SbbGIwwJ@}7KT`uuGZ&Fjf=9-2_ߚыÞajo9 {obR3 Ԫ0JZUgE/z4M:|L _MO+,c̄㶆rLf&HV"~0D1( |)crxV UrT&t^<{YfUU*65ۆRbg)V]cMye -Mhҽ%ateUEet(r) ;Ww躡VOf@nJ8$im[f$4xXƗ^S $b`P«=*r&l"Ioll[=ΙZ@~-ϯTĽ6U+MSN}Jz=MOOO_S]dGA#q-¶"F1ϸHLUzGq-nťWzgNHl.yt(9T4w i HPXl'W/jG=u̜ɻW 4DœK,:}8fk 3E,,ftC)rnin;Ί'H\Cc(ks0tY[A5H,Z#%mSȹg<34`POAWh%eT7B5*3)iS\.[Pdנ2ri|bpgR5:OB9Eî)%r~U4!o[D=AR[@Ef!ŮP-g|+JqKW5ʼ%rO)x [ 9ne,j]P2ZEmrϮfsyC掠/e#`gI)=K bij1nBx5*"r5oA[428g -"j Gnŕ`s AI%xNM@=kec4^YOZ(gE$]0UMp绤`` ϕ\% hƀ5Ɛrb30CW ,ä$ {*e rNB`گV倳8(JZ0jc~9Z^s4'6_=M౑a}eFJ<|-koJ?,|\i~p7Cr$ ;ދ?s8,n ۩Sn*6SrI!yڤZf0_kiR-P!4؏ D(upӪf-Meh5šhea۩4DǛ?۱ ՀQֹQWqih BC8}mƑgbٯl4팣(hm%slXfpv=]U%yhllG蒇zy=_Oջggӵ5%,g~X_X@K}:W7_ôQnHrnuQp:uu"..n.z}@ d -WwuLn}^:f\59xta^um>=9ؿdK߷ٿҋϴyK/NW3=^y?_tr&E~}Yg?<>sݼtL'tAwޔE\/ a׃艤AqW?;?ߤn:p@[s=]G2籖/X>3:GEuW7YBKެw-w񙮛r|͗|3y֛^vy#2~^|_=H]_L.?{tD/*rh﹉eKV%9T}gr<@ӗ=+_n<<4A-mW|G _Ó@yzSX#G+<}ku8G>;@-䚇\6t ,Ѷ k~Fz9_iOL=u< **eڥҵtQb./{ \Jk3I'\ˋhvlc^gr}jԒnsuLZtWIOF>jҪT[Qg'RMЩD/ip8(-?3P۬cfAC ȷhy_Di%3O7/ܖ] ?|v(\ߨGp[^~N-+B¸\ͺ71z'YLlh:˵E$dH86B 9C I q_)}Eϩ}祤N>Wg+vHk52 [Y(b-{xkApb}qf5N=1Ѿl}B+xJòDG 3AGxx's'ב,,粶H; lW l/gr(`^/0f9;|F41mqjg t5_ӛ+Ӝ]x/Ϟk?}x|û=Կ}x?~zK[?=ᗇ>ſןO_~͋~û۞z}}O|}Ew/||}??]@C3YR0j#-1i`W5׻t_7TO>@Rw0[̼Q(ڗQwa,n IYoK0 3 1MUz]CE[ԊŅ\w %TJ |_.N-_v( Ϯ,aI]/w8pC1JΐR|aTr%'}B{%v9C4NJC4=@\OLp'iLxuNxh+|Iڒ:GnaM&e'aw"uzZM`n(ݠ" d9) K?Q~&Pʘ9yZsc5{>o4vE0A_e2%Zr3@=t )h(BbTÔZNz+,߈nFK!E<1qBhvL5d}^ք$rxf~7JI!*%Q'%GbR-j LJp'y aZyشC eZ2􆘺&nƿ~2Rϧ'Ǟi/u헜RϵHI.@ i{xQ#sz[ݐSR aqtÎvkv;GG؇\O^'KH $n&:n 0w/1ǔU1L4 3;?ExzfXKnMÄH<{1=B W0d6 Nlu =;'`3=ƮTaZso'*AN*LopNWιs a)̟SKr~Tk9"t \޺14muhA@%Y8ug%. 9cS쯀*up[dq*ADZwK(CbX"ߪRrH6@ M=Wt zի'@Y_LiҢ4pjHv=chHi&6"h|DED6k^Pbu&c03h!./yT!vH@H,sߥiIXm9> Jis~VΙ},Yr#`L!1XcWTPE>rCBr))roR%vJHvvTAIWa% Zdy}xcx0ǚ9Tx3(pn#-0!紈yȒx4$2kTÑYhP*c8=F/4lk 0$U`**ֿ_>\ ܘ);"'>[MXo' Y"fy}|iq'6n`O!uS2&3v_vsV@σx\cCnTX!yUwL#r: t3o$-VQVrs+uh[Y+N7I`+HpCy$ӗbjesy%S/;<;qT8<_pF#=>3!g\Rm+˅D*~*d["Ù!}:'nkfiS0jbh} FQv1X<81<4IYn<<?-^Lg)졿U%Ԋ/"VC#RiKr9e ݅ҽ9oŔ 53Y{"adHޏד=Iz#`NzgDsN”cY;f sOŘtgo% 1Jsgd+TW+h Ժ tG bFe5X@tUo)OVM+衃FJέ+Ci`a"F:eKSoqD*Sמ-@6͛O@(E=?MPnt;%%{8~r9B"z7.G$C%95k9;J;='MFUN*K6qjb0WW 9qR&JO Yܱ!ymAH%:۫H7εyiQlBFiWR}]!6&mϴ] Օg"q0yGAxObtͣ;ip̹I!^R%T_b[.wyG̞Etsvc A\E3f qN62)L܋DUNI2&/ZhS}~l0p/Lj\s?  ~R,2 H€3˭nab&ɲ04.w|*o0 um!pǚT5[Rp.- $%>Yduy$-;JrCt ū@hvJp ~-[,.6hPɁ!,VRclohьeUVQIkq:Xbvv vfلEþ'tlm!ir GŤ7N$u:H{'OqyS?]q#;R;a13[aי3o[X }֖щ,e0\R X i6EIJY՞ّڑ0^2)fΐ3nnۍ=xfN _<׷?oMjի?"8\eL:˫=~xYآ?YW|^>Wy~1%ͻj~/O~xxzo~}ᗇ_qo{=7Y-J4HZVb `scm*^*1[[5,XF/Wl;O,q)cjR"rEIFlGL%?ܝZ r*8wJ$tZ5_Fّ/CO5 h;MvP\Z{.zXkhv$)uîni9 of253uؕG%% EЛwhGc9nugbq4uԥ\56.> NuNi^vivrQߙoTjLn|)MBRsWʄ3Qǝ\MM%b `Ь ꄱNIR&9J{y6ͳf0iZz&|'J[Y]i6=RtQi-z˕DC٭ʎbfg]@B9kz(˱cjvcX R5t⁻*G >Ƌ gc{pI\L934]x{'VdDL${'u`]HTDuxr H \u!ꗂ \+?:s;A|<(h !A+3B ~lvC G̝]."rMǠ:*Y=@e"k=mtH;ٜ79z;*: {CkV+Z`+%ӕdgHKyM)r,9"v%=;-FJ Ҥ! Y;>hkI6Ssmh̢BWE\B?9dZ YaEԳ"V|BaSV) EM=YcNNř0Ȇw]KPc7.6b\,ttgΛ kHH;Q3 &yݐ ;]O5LfgRHN+6&S1*9=V_gշJlul7@ b3IUgg4qERHQGvLT䪝9MMgROlӤIkg NWaWP˻fcpSYH88m3s˱[_x l&2Gt@Dqq!ŐM| ''iU!&/_%WdF7 )|3% ;>[`,,,b_,S^d?n{ڑubrv}+aNZ>=Ír컟Tt!7p2lW̝1#:qJ.@!"ח&mkS9hZWTςyJ(@,O/v,k2q\O eǸ +C+_}|%FP`{.By< te _)|u(v B7NoQo#(CLIc}!DR2#B @3D'ckG":!؏-B%u5)+lJw0>QHLJ´DH0 [=~35{-.+d ꑺ˾̝?VU0"3nI;?GI6F~r˼-%-Saa$7 q2 or +o~``XK*ٗ~C gNڂѓ(w T+I:4jÎ=x $cth'`4DQxR:s*d 7qR6n qB+8U֞$կs"\fr}c9W耒]][Abn$fDpk5nbA0J0ձ7E[TpRVl(۾s&N|3hڎz.U g.DH-/rdpPml^pJ^K!N{;Ğz,Θ|8'@n!Z X!t %PӔ`9)W~J)| 岄FΈߪ XD}H 3BRFQ"$[SA/aSkNɃRp| 9RT\ũE:)>(N=Nm&1=Q\XJ &/675VdYLͅt%<ׁ#4Fv @E).RjO΢VJK1Sh _oc*-vv~&9n5TAjwVsHAvqݤI譢%Y48v8q8w 4wD=@w,\JkkI~Au*mB,]XtΩF gҵMQuvz ]pTp1E<$8N?0ϒuĹdkbl NT;hE@#,Cz/j*U=rQA\>m`1z-rB@$-]tCBwhwqK! S8*1%l&hNzW vdz88do5w8ujpH4}^zҾo k=pȮâ0s}9[9o%zB#bhj4,&)29F^Š-Ny $b ]5ESś`:0'+02mٹ%=8V_3r7T6k=cK6f&?77 vĥ8UB˲xVY<f߰?ѩ@ņH+T a+_͹G4˾Ӂ3NC0 NG'B Mr|]a3@d'@R^ XDNJ?^4Ӥ m\bC톦:'w8zfHQ`QwΡPe)㢢PXJ#i^7!3kT5Săiagd: 4-LU8J]FETu.mUatoO$6ztݷro8eo#| OALyr* m0#GMOL6;,ztLʤFO%!)@ʷ!xPFn)S^xM߯+_DV Γ~:&6Ua:sOM%GVVx ǒdu}ܸ6:{*і]o_:2N%==>䒖hESΛ P +nCk0 F=I{zR tm|A(;xb%2KzxfVьoMCCpm,ۄ"p.2LdQYD@qMqu*lT'!Q2RTŞ EEs(!5rK8gww$dYGva\A엟S?SlOԚ;i5_뗏;tl~j6[cTPYwέeY#β/a,?wvE>Jtd\MW*W0$[wl\ɱf瀗]pCpH01q(Q).>_00%Q@@oCΘ4:Im%v@pBLӓ [m#X >z+&ꬻAwޭX6Cv{2?ɼі6%J:^vPa0Zz;.V ސhYМmsUA'sX0F7)ISV?=lo+Zy32bObJجXh hcs1b:pӍd6*N~:3c t3A'¿uZj/1O!d}LKm"舃WcpAWf6c@D3zD1"*K^w[j&> 6MrRMo(8vri=oOL5/?PG<׷\@l"Z"?{}raAfv# OtW2HcJ],ޞ4V! 0ٖdx >ϒE;OtoEszGbRA2RVfMcprӃ̣B2r)#9ýiý5 ?4w"i~;szCl:QÚ t e?QebOyF-bW <9tLk=+QOƭPLt2&PdF#ouQbTal9T(B [ L΄w\H hjFAu&}a|/Ky3L] uBwOm ꣬GówkJWNƑ15J (G{.h㟝%Hӱ1uKxġW!2>љ1MOUҤ9SӰO:-yʼn\]?G(OBw{tbR#NG=)4Z.=2T6Xn QsXjɹ)zZ!Y[Y#f>>ҫclTtoc ӡ,ݖiT BS3VBuh2L&u?W5M=Mz# ]r BC.}[7xqw e֞yrG %Yd/,&+cY]L&`wN~r,NVS*9o?Ygaö$Owx1_ AO[o ܢN2bvVޣBe`A/fw0L|1yN)/fҤ{H<_mF=qY'N,6!#xO#nܢO"8J,w7x`[[LY/2 GoeeIre'ǫlaig=qLcq{/auWL{= `L^e~D};ؓq;q<(Ƒiؓuyݬ,a >F=t[0Hi[Gw,q |'d\y7NK?L ǰ̈M'KB*qZJ3| %S>⤼Iwv,$g6q#.`Hf>16auo˻WQnѓG?ӣ'nW|_/><|?~Vz>r{w+>yww׏/??y_^E/<;={l!p.O o_~O|xxxz?7qwo?L{{/^o}wOxǿݾ/uoowO_={~7_?_~<2*/x=DRy _*tE"%to#ӫ"M4 \/2H2l.pS@9eS2)2Q}8C)0eFծ*a8쇕8\\'ow<4}4 % G?ߟS8Ubq"8vQӲ$ҏ 5/Q0U[U'>?kF][$5K'dKad TcUg+W g#MU˺&lw2*nݤ"4(S[!z kIXxWЇɸvB aB\\]5Is|5|Ol"Jx}<,9hSmq ˲_*h/:nWH{&x*d.7VJ w?$BC5 V| @=`Ȓj&tԵk[c7=FF&4'n'iz >2HNBX;K9?7vF~x;6*BGLJ/W%PlStw-9a=ࡃˀvu Ey|c^ ; ճQVH2qv|rť!D4dOYwU:6JI $<,qx!liWK^ M_u6ɺ̹} `1iP % *؎q%2~.udB&Ȣ+zPi σ=*|dQ;Tz`Y۟+ۯ`m%bXkz1vƖk>T !hYۑ`ĹM&'`܁Uexx$a?fj*;8MOQ.xI kH_m)vg,(H1H粍nvн=`J<)M4L3#J{vz 1b cфzFw\eȏ/E"3*?;y~`!U&=G꓈Z&;[$ j\@MFNV#eY]_ۼMi3"5M2 PY:أa0_o`~'8XV>>yi'O(2y'svF#5Y9d39>;6A BY;ҊQ? m^<~#]8eC"=D') j%d&.'8C0>:=zyuVǷǛO3ޝ~}/+tz~xM~|y??CY"5l<`3fx=5 g^Y8Lj 0\w¡f| 3T6l0ۅE\ ANҠJ WYzWOJ~6ܣ'@/cTf}!zi |/P$TrupOZn_3y _ +C6Qbu8P7.z0p$jݻDqXB b锹%DM?]g'h ,+ Pfb4""X_e{lضqJv ^X fǡ͎C.9wg3xb`0fHzDj( l̇fC41$R}m3m5*:<]>tbA~r]-Ɏܭ1}`c@T35Xߝ 1B$'GHhjoO:o͐;۹1ud-F 5k rVH;RWO % <挈.kU=uv;[U;^玘mVevEDŽylܨr\t-n'e1 ]ؤ2˫CvJi'HLc Q3RųB03DN_g;⠽㮡晕htib۳*Xd m`$afﮤb#Sz  Lr:Ug'RnaQ"5!fE,g3yԯ t̴c1 Pkp($tj|= Q-}|VK<Š>s63/2Շx#0RY=pxc%2{> 1P-vdN@H9t7)fKmpFȀx 4kdOu~$WᎪBb^᱇$k"}n.:⒣p)<Ϸ7.(v_?QCg Sdy2=䥑番exeZylLolc`}j:` C"o 1VOs ]~K|?؏ g ͛۟_w߾Jcχo8Xf NHLAgAI(27!N=H$Hf"MQe"'jc78x (L:^ P({]CIs`NWC6LF; tМLa*EegCbZwu(gӃ68i'X0N9#}MP#6kFܓ{w@ $uHYOP ,&дljCClwYϬlB)}n`g:4?]^6hؓJg•:h/6}WY1;ѡx o ;ۓ=6tlT GwtV'3̄k#Ymwh0`lSN9=SWv3#¶:6Hqv{KQj〞q W 2kة+z!FD^78_3ٌ=ޝaH5a/7rKhooBP?2蛞[u3FXwe)@()룴_Z[p* .KkA ڷ{C< CL:k;R,s31nI& "LNj'no ]`{H"@.-" j8 q}ӌbˆ!#31LENB:z@zM ':''P~nB7 ?ˌq׵J5#>ǡ!vw-nӈA^Lw,JCH\-'؏F HS#O Pq7DҸ=<iGpI|N޴lTcteb7W5)&` #Ioa&\vĕ*@(DPJ[^`n RL8E<)L1v.\OVȕ$\]k^x"@4X8[19- OHc|$6l)0pn0i:2B~?݁nyܓEP=BY5wd.t:1viDE<1Zk=zbd b^NH>_XbԾ?߾yVJx?=mV/%-$\>>ܾ//7wÅriW)!2pm>맟JESA#ǣ/Qt"^"D)Ԝ2O'T@ Z7FUs#e'—Bc=yoqXPX`Q&Mֺ5Jr "KnfK i @$ u+Z֏7x J"'޶B+@UƉD][O+NZK6M$sy̸L@J`* nzfC)Z JE"mPVͺ3PXƮ]J EaT`3"|-]Lק!͛r!\,SW/jKNG&euàErM(K@?ʫ})'$`{!]|3:U[^䬶٣59l[Eݔ`wA`$Mǥ_-쌩P *BD}ĊQ42[W?p aupDRl\,#"z0VzITHZ%C P&{[-Kٔ@ 9:=o0KA/{X^-Ղ!RBq.GRS Xi#Q׊pdG Do`\A+QtC|-Ÿ0Lof3$ @%Id&9yVF[nlCE`!;=BҴ^yVӄwC"{sjʾln`$lrlV/GlQ~5dw4aG\f+ŏ>]+1 OfPf,c3n9l19 j~Iƶ).H`̺fm 9ά>,)99T``w׾֭dB>zW^sV+xsF!+nYT,5 pxnA;_DltWp]U"!$Ω04f6QK]ͭDe d*p5jM|DQ|i1Z&)<ͬY5yQj$1Ah5y#"DipV-ip{7D>}F ok!aVa tX&U?1G/O'dk{hڽ]L[H |sD3O[+q-f zPkbL ʐ {M:? mqO`ce!vK faBg)b$WAk*pH 7 @P9Z)iTbFkNU"Eh}/`== GV徂lKiU"ᦴ*e$@f౛*O 9Յ3.lK zGQ `.$lq-j5k.iS*}8ei3ఇo%&5o开&st ޖ}\Cn0$9jdv'@Kq}[2[HB*d5 =`B55.y`y,vUOJk0L:=^,נ[5B dlt ڶl?06K+JRKw\TS[W"zض,Erx#4{|OvlSq trlO AKWCo /\eC5HjUĨ;ْ:ߨFuDEV@ d|8 ˊtONs[p y̒/E1*t#[$yѴ5-]\(\k BcۍAr^B/ ]^zM0q8m*䝫J*B_n^Ά&yngÃKW"jCÕ/ "[L]cZvfҔ{-ԋT Zժ8.vȆ:ܴt4S\'LQf>U6zR;] TK{W,dU2m Ce`Y5xo'-<~_v_ӖWOщ첃Xir.[9hw6XXڇa `GvRF2Swq-}хkDTC汚_Ѽ޷i *D0%$Խo _xBrӖQEo"bZ-OcS Y.LC0g. hߚcӏ5҂[?hx.ahtV7"谘vctK̚¶/ F VP咨-r(|[,?V sq?w?ؒmE9z 2Z U)f% +MIuȲ2w8;Ma*?^=DBxaE[\s`7źhWG@^+`jUV+>P f)g4fV9Z'IYY vW3`zgut56AxockԞJX+[T ѪYc] m! ׯ.dztzԷ>p!?Խ~E["YH{N7o^Z/<<6֟V>N ݣalK-'Utm4/ZzYTܺ=ɭ֊8/9q-$KLjU[\lfFU8X ѳP/!Js٭g- )sS6dQϥXFkf:q5.UcʎnNڞπ%#U!+:kA0nZʮ{v4Xӛa؊M5G[(תx"H721G!A@(Ilid_-0Ұ'XXF-7unD"6Rxt~%7{pCyt%}Xn b fA'oPK/O0.5|:H3֠./5V7ės!oFm k .y擋V-c |pd?,4YU'hKG6&<'"-‡K։JZx>i-iHC 9;=-ZѶɻ9i9n4HK,#O"=Zˀ{`FRC!ٺh{xC|x(=ɗ;z|[C"Rkx[ a {Z^Rxp&5lE^'55mII{U+,79 Dؒ7-jQaRi\&>GJ] $Ԟm2Ji\g"*u]<#zacC+JǾ5mustG..JY/$M~? ^Y ]XnEJж%#,I^ɬK DHg[1KZqᗋ/$Td,Z#XvJ3<3 ktm56MxJV!|oD|! s- \,BxHӇ|#g;dT}s2*[Jd4aEHHAȺ3mƴYZ" OmV&-b'ZI iv\'9kvjDr`<7%QMC}s"lGsr9xVBUeBSfޣlcG TH bOv- TdǣfMI,|!)6=ݦ3aT*sf$U0E_H=kORltMśȦjv#w) m+?fHBt}2遪-ROFmr 2NT$e)i9gg+Dz7D ƒESMхphnwFayOylhfY<|Td(=a2z:Π 4Jԉǣ&hS:,Y:$wLlDv4d18%OAEՠޡXs]o qEHI"ge-\_x')JNT'SKʴlFwf6d( Fio8{LU_:GT7r7E:JZ#vSr]e‘ֿk|Z -XQdEIbkx;Ev,jC T$kYeeJZMj( *)xhH f&EZ(̢00n/{HtwMTKE.`(eb5$c^r$$>)/~j: ~˧w|xd.맫Ϸ?|3wo߇U}||ǻon}F^wp߮?k~yt{O|{V$\Ò)6kܙHBK‰=#A. PБ'dHX][89Uts",Q6{ F18;OKq=U oZӂJỵar ) ۏex$:rNܶxQZW vyTX`;'9b0S )D(/%2FINszT'0?28rCR2y&3f(\(~N28ƸvlN,I0IȻ Q c|)_ɩ)l kX̎nݤ-D0yPA& lrS'%61H񲎢 L_G/Cqs[tԘW˥)?0%$Tt'}\.겡-%R~T³Gq:2 cyiDY`Y`ߌ.4 v* REZܶz֒L@1ŊA6@M^fcK6srXzGh֏qLc~O`g,22j[MkkAs%IEg0;%x$wm8X6pdICZYǴpp&BrL`y,+a<׆Mckpղe$$$D3vT)x%U U3nE !Zч"TR1sVT"J;/΄ASEjswr PFUjkWR(MU)0<;"AL$Sn-Ng[$>"`SRf='/cʴ@t`1lN齺hc؉0:vPdXΨhM")hV)"R {H4uX1\PA*## hA~^ذދ"V 7U vpvuvQe⠔3O}>_;'N;OKYΪM;V^}}h¯^^ׯOO_igڅxN;߅z?~7޾8)L 懛Ǘū½i@&IحX6*ރ֟d2 'bE5_ׄ$aY\gʋM%Q<_DӋ8H(.>k'ue.^uU;>vm(9Pӛ#9)y)1".[uQfcR1~SrLHuz^qmVcuT.n͊&E,V439y)k{M:ww.uMDx-cɘC'%)۲nd54r'|FQd.c9T1/h IԦY eglݍeoǖd`{=k$Zb:3|Ts{w%>Gy.YZa3}2CTe{{=yG>gBYB,KsoHE{,&(NjYRVkY bgb?XY<8Vzb6㣤P$bWuGU( ZFN ɞXoPodc5g%a6sxͺh_iO6*l뭫T&Ggn|4 jvWژ)wܡ &ss69We3%e&U Îa@FsF$ǵj@m/ӵuF䤠椉ѮF?ZQɥ03qsg\-:#bVY1=g^a:nJУIEECgG*OV+NOeLXb`r׾Hg*n~Ou{RZCȪғ(p=6UCFnPxZ]{Yv'F,V0ki/;tΎdAU@| ErU{9R7(#li^p,˱oRŨm?u(m\VPSzKa;<1oDmv%e)fv:VX[c:JkאlHrD6X+F5%6p;o$c!U^5!}2ZS[6ARϒ z**~y >C` ERCr0Cx~p0sBʘ~;LL:^VܪĎJXZJMm a1L4I$ʱOrT _郑>Ym'Ht2 {˭̔,(eK.{kVʸhh ڿfޤԻ4rN aSW r?d37ctg]QtO';x`L[bdÔX&El),,`> %1:9B|p.uYIo TaR[y!ud ,@垪-叡e9ʹ_t6]_ϔ9+Hԉ/{~MƷ •q*NNN!"_9::M&P #sh\ܙ'$α)7pvd9LL*utl) fPl&r C(Tl`j xƌ3ha.)%$u &nts&jwr!gL$}G#Óeo2A3uMk ;% ap `KE6:AL +Dce,MҮ,*k'h;;c3jh8`,HT)c @d! O8иz޺螁w^:ØS .rJ!`g]ek @r4Z6sBvKk1gp2%jՐh0D'&eK8`1LGܠ-^ |q=ehn Ĩp3$* l'@KR׈́ 9=Ic*ȪSM H %q,{"5K;i8U:)8+JtAtf/5*IG,|Xoj(,hfA ,/d LJ>&(e53&29W-S l* "25\x.3%FOB8TR1W ^Nb^3.x ۲D.}5ge'N.J6nűts~K_RzzY pĘ_+1nwWd^?+rr{ڃmzNn&fMvSZaW\W<nq"e{$UsVUt-͌pgXF1찳-l/{lkIh*\ EGG%`DZbʩ)i98No_\ŷXk[bnpͬf6S8\*@%w7siם!wvhOm&X#VQ̝, Φf6cԽ^{uVԑ&C=vHQ3}"=zY頥j:Wunbg:uiz3rur]! 6ۓIX~zv+;. 2g1ϝZztNi\G' s;TЙug432ƊNS=9cT@+NLZ#;A|R빥/Z6;\갩=lNTH9|xJrB{M$SnOŬ6ڥ6_wjw:Z:e\u?[je-6 |1NH)~1Ew濖2q' ;Τ;Mf hQ"dv 4qg^|* $%&;E=Ak+=/]zm2vR490rnu <;y6c1O}4T ގܣCSs`|Z#)< @m7)EtcAL58>9Ƶ"ROcVs?JLXɷ'3!/8$;-9&0BDyTs-f'qyDuYgqY7*G;k.%&_7g;];7T:WyrUӓyzj#lk¯6BZBw4U*WJn9+WP#:eVV\G*7wJMZ0,koeG6h햤:96)#O,"jmnh9D`KڑX/!W)p`N?wu#4a[j>ь6 ^ _SoY˳f煪Jy>l*D霉\:2lÖO6KaF9/"s 'HQ+tzY_!fZmQS2-0ԝ=C"h.K9.g@BC.}Y7x<P˲l\XЕz JJ_ԏ&dFeuT[0Bn>ٺg*`MO |N)yx|g>| p6٪{X>kVix~yz=G91}NkE\Dy VkQQ`&{4=3yZC[/}:v܉?3KxYu\<[< 7=JfNh& f@4iִmI͙h4|Ntqnws<,zM !!+܄siA.:;E;+"p} m | -z'~Ým;o1ܬ|E i:z]@2JdMX򘖑{D<3Yl&F)z3Mw&=*H )! L+=YlWpSaC"\p n!6!ӏp]̧O+rGW^W .h,Th[S#(Hz~VӛB,鳶x9WsDa d5n}(90 Z N':6MIJ\"D09<2B!xnTR[$쌔`4mqq-kHyX$:i)-3KeGlGns3w2>zZv$k<:A&S-rg7S. `1ZiXv{PPH&,5 4!urFY_ˬV@~zDF. #ēR_~=s PZV3sp.ٹ#WPtwoi?9=GGW^|믏>FGQi矿y_?޾/>û~/m~F8=|ʏv{CoN*xpzzo6~l|x/w0ó/?׿viw?O?M{w 0<9_{㻛n_ͧoo?~}oo??K?>|&oWҿ߾</v~?__6]o_nwHe a|ޟiV(9]y5ID[_RzAtgdbꤕ,=on}vP]WDjB>Y_MjFŮ0HϛיVlҊb7jy!Me.,[>MʻvG<|/Zo|GEqXNNσV$Ufv12BA:,G~z]^'\T y<ؤhkZbki.)f։L\'h0g``h:H INzUJd. 1F(>iBl]Z Z `nY& <_GFH&>f> pi^t281[/aq(@̨)64F;z̴h 'Stue&)OJ^MdjR/k@c~)8\N6.!,kv,Dβ& '!k&bM-~1ae@E7 rfj`*a8]6sE7EXh`ٝSztN-mF8c^:8)-ޟ²h0<,;Q=i!vHfIOQ:9+( Xڡ$[HO/摌(jP0|Se12;KcHR@.WA>'YGxdp W|}2Pt#R.4Ye nKx@Bڹɩ qrTfܻ ̓oV :F#ǔ/X2?]#)EE9 v ӄ#RhH8i!QJY=w 'D{@) /Dˤ5 Bd<8pxBc5&BY& D"@ WD+ڭaU0!o{APEw[Qp-jUfO+JFߔk;[)ne5–t$)Ӈќ]SHJyh4# nRe2+Gz;ϻ5Aw:3VsBrY:EwmNT#OAvҜOHt=^P9ҲPuXտ_qҝ;Kh&.N(&@j^cf#>dL$Ut7䊅1K~{]l ju!S5yFL:1h ɎP2hp5%0c7-Ju[4/#D2w)7B إhw]| uw"BoQpDT~F1-PXw㛊c#ES :jjvV˜$v>֐La :7 Xz^W;GSԛx ]x)DKi}{w?ߏI<ÇӋwC,Dm?}7dx2b2<΄&1I(~Jz|-n?nܼ}{_}#߿w 7Pf܌J*Q;=u8qZV0n\8WK[fYm%Ec"%G6v:6q9gҜ)sV`q) (['>>'nǝͲ/Džs[4i|t(A։ٖeQqYk҅9\=H?"F?ٍ8/~Llo__ %b95lC2S`Ef\K}Nz}eWك>4(^$ٚbJ7XǴv\M_{m_v|/l[.eGTH@hy@\lTM=)1} gB|]2NXp5 #Cޡw S-ۅtrp`xn3OS m> V.|_ܔ!=vI|'C+T{8d\MdzvH sC~x/m}o+=}(;o`sUphGPqWe%cq_!_`2}4qn ?'oD5uMֵeШ1LQPm( <VΘvXWSn现r,y[=fΝVMUޜC>8clj (NA7^QN3R7txQ[CQr;UöctsFƲhKC- v[fEkv)TCǪT98QFTwcuTVM.HeCO4Y vy]&PV˪0<dp9OhFZ+[S:m0u*3v`mT?3%N42)je8ov=~[AF9ȅʡa>Ҩ*{ F*ƋI+n+ Rt*ڊ%g6m膾̂G~0f 燠Au'50u\eIMk3ZV{̝b<胬J`L<JˡĿ(nBiűcSZ*$ Tu;i(cK2ݙ.K? ((ӘqļY2U-YajQv #`Xd>v=F*hEq[FMb*}:U1u{^ ?ls:W ]Ѱz NN&^*V3Qk%T{K褨} @ @sk Fb["z+Yb~GPK Op8y L/ O ăGK- c#L}@:,tC]zҀU񇘘Sejbjg1COPG]>ϝ{A^#j& _E:BĴ.7_rM3d.n"%, Y m,ת;lczfC88  `j|,jG) {q,*UxhxE-ė:`o>qwy_Š61j_7ۛA~JyHdvOOȧ_w# >3\c;^b) Ku@JĀ-:1DJ["NibvWvbCF`WjbU}(`X.Ҧ~Yσj·+h-Q=0)0¨@-vJeBoLL'#5ȵ!kd^Cc~fzgT{8ᓚq=G>4@KEs>lp R:}Ԇ6@ziЃh=L$MTNxH Bxm1xDvlkQta- 鿋C 4d p|o2`๙AV1:l]4CQF@DI5cmo2#-8Yrȍ*. [Zk]A` {`櫽 Ztoؗƚw]m Raomeg dž\0Co+S\׈q 4!1=5>#cʛYo=>8󻼏)Gʗ.}+-s|ꑶ7 Z{N98_yMd}. x`140+ہ\856$(47-0oZvkLUS:kl=e8Vr++MQ7'nrˊIծ{-lrNK)iY*SGhtP;jt4K'au+*áQDv n$lOq V\K6%]oqnpz.êk[M1T:zG0oކk}`JӱF{x#zt -ڈ5}s'fs3~V N(\+h@&v*^B++xD8kdOhx{On@&-Gt~^' b&f@d35'i8'\zTؚY&\Fjny&XEal6J|R([9D5h~>SH9{5}hh-K-xm6&0BC=yETKڞos|YٚsU۔+=BNj[@<.-5DWx͗+xF] _ovo2~$NmIpG(_ 7F!}I5 :Pڀ [fw0j4p\ƈϣ0j4VJqQa7N|ӣ/լc䆴q6U9Ns?pxtzP/rjrMk~gD~qr GmXZ~ MlR4l|;{H(2޾Xu6U۽ΕH{N\0HThP4y^Ɣ+x^^ow> S)A(=E۫2Nϣv7(n"+ܴͬɬz ANDz>XM)(Cam`K/ic `b_:AXo,6l?GL&ZfPpGfï|5/ֲ]/n8::N%B\Q%פU](TfYj~ÈMn۬Vq`7=]փ~Mqݸyw[,\n5:yFޭs܈AJ%s'^l;p^9 8mšxQ`>oF2Z~\[NVp!$,ӷEf5V-MɹzmC~$Fډp_YFO+'&W)X-vfg6 kF rb xFT4ϙȔZEzn>gŇngtu2ҿ 4pCeޑ t1vu^4ǚEIXQ3K!4Zu0Zxm{e;&Kܾ =ҵ.v=NgmlEρ+<ѕۻo7oo>e/]QAճ~Nwb?_Q凟?ks?=Y3L{c[17o= @ɟbȁ4!4# K*1SPY(i:gZJ"Y!itYe~3[eͿXA 4E*Jxh<(|4?Q&)~e ?e!4(^h^x-CտL kڲ ӆ DddqJW|z@ 1 p taӤHabe<6ɸ$e\. T$)ZTA`t+`*Lw ؅QD`kZj=ʻY$B>6{y8ybtEQ|8Aif>5k ‹sԻC?0R?9^:x8@Zsq_(텪~AҀ=DMfjPVPKH'B:kBr*@dmk|8Yctt(Hvu9Axqf+밈= xj~rPNѧSQ1|$C4mp)L奧}-[VcYaTU+i9Ip&*1sYXpLY`KEѕq5Xpy'|'fb!%b2 h4I>RJsU­&)8 ,eFUCkt;7J٩";4Wgs "w&ZN85Hn2RA"z0!aIh[`A93.m ujYd:9^ E7¸ |ANۆ]55cA^XcZ\E/Y/+@,/RRGs)j 2PU &X k9sԙUl@-L41W!y309db H.̷K!0))fy:BVB[banbUcpyM1dʍ/fYN&kH\EIդ'|Q$DBy2fj!BO4̐Kװ*Z2gMd-WCD}q&dQbO$5/ַ,3be [Pd硂ȇM * sY60.nͰ_ՒCYgދⴈ6k#dsUU\vLse& G6r _ o4\خ*QTNluyU FSjB:ʐ9#&X[X#sbC zVVI7]Ig3S|f+Ӕ.Ii1A ] Q">;)򕂉 ؜LXQ '낛bj.t㈾XEO$p~/i]/g4<@MP=ysfZ0Dz`6BB,T~gу|]i6jq3,=Ecbf\`R YREN\n!b<b]eϋ%c ơF*@ʅϲ֢[_hˡ[@6ǡkLMfA>0t},]kW2D۽6|ޯhȦ(mĆ&$^} l1aHj_e Oca;u閺rôNJG>n(h"0<ö%0n]qcڍ[Oc9S !O"u{0iQ:$GG6޵Gow.hM0Y͸BV2iNJ62ݜ<|0(yva"_>~կ"v*XqP6"OԚDiOWO2d$lǿ/wnM ),P&MRA Q[JIv cf9Ǻv=eT GbX^(~DbJ4&gp\@eU#XC6) Lݳzn &t5'A_ִ@]0n[VRC0jw9&8DBxeW#Ghpy”gT)SȱoK{yiCj/l\_syqې9L[U 5#7Z1q]H`ǸfXݣ^;X;QUrg]'2T~d.cjIԪPHm>{ ;xi>kE$Xǔc-'$:gtt[Z,B!Ȧi uUJjL@KT| 4d'm}ד&dL:ܗLތR!:5 x}*%ӝ+5T=KFEVd6 K{8m=vu &5&BJ:PHڵ[%bK^ RQhN|H{ XQN9t`Їp<]>PFMj0-h9)T2Xމ4bsiZ^phPzVB];VpKxd8p5d_Kfus&|AM*P2 چjޓѶ0Lo;SR7Vd2vS>)qUh hɼvc4TQ,Xṕ|ñ(Hcn7b5]ؾ꓇RSǵPC-/"`vjGgԣӣgMFZ~swbQǯ҇OڕgrlI'm#_ P46d+`- {NΟIn`[r0t*F&[M-BS pRw^ ;K=jD1vl|RN*6H!JXa lol] BbǣgI{.A9:/=(?D䏦؊7a8>b#*8NX!km8^rqFͻ<7b__|B"xr;FP&T4Ac&j/V 7gɄy=Q*rlY+\RI FTx0ڌvSu+QN:U Tc]pZJ5]JtBΈԁŲ &>ÛŢ:RZ;!KAx8`J3gi<85 YK];[oI)$@g Vh4.pqz- ;)IUˌyBC+]YǑ~٬3ې5`Y4~$jV& ]7#"ꪬȑ)+n<""YžKqYA,sX4x< u3]Ox}E׋Z"^C1p/7(_p,ޠ d-2"72mooh笼qHސoӓ.W!!NA,.PWU<6Xo "lCZ%7,,CZfDhB]$ N9Q: *e8"Uy @q}@zܐ Fd)HPHOI ް< FoH bLVgQI[KJCҦ!I ,6E! #7"30hn oGɫjنEx}<[-R ҅ 0D J%GZo*lsK<>k=lt6)U%վ2S I$hۂrK$:r xtD=\ Qh y =uH$[DVCqAŗXЋ+|$K#>,ɺ GCCuZzfPJf{Pߠ*#2WxKLꐌ(R,vLA&KkPkzp )Qp\!'#T=F6V(\U0X8&JMbꜳ`1WG05elN!RB#: (4~(C7eTRܿ}&T^gg7Ϯ\}ݳτԿ夅՟?Sw>pww?{_?>Ri4< E7sy) G<}o>{s9_}}{߾/oOo?Ee/) `IЁŘt~ ^n<ō+ije+xjAS#.o_@̬!Zw@wJ{4E `}e`0h85g`J$Ri'P%;C0ijcȆ'~,CǁȕXy04| XJV4>$ ⒪?RJBjt=I`Z?AMb'Ԏw &{@!̓T\0)HpeseqꐲМƨ4X$i59D( —QTAB2בh9L  +I1XPHU(6]8)TJHրuVEUԍ+Q`$PBG  bW4 fJ3CV\Qj/5JGT(,eu=nI`wH<+E]zIWH,Ep%"mI{"kxjqŜ ?VR3eq ӱ D%8tVG[`J8? a/"qKQp}qQ6jaɜ]͑)3%70?ysf5\T?RBL>8$6) rWE/B^o[qtkҖjy|,"S\|:C^hc߮6㎺9"k%xLJ9 (v:^g]151V"g`#Ô%P5*;~H FIlʶhh4, lX'PǶ‘тhLB_tBB,E"yWEwXxo6gy"$If{$ʎf) ^ΰS@ۃОk$g)^ ~`ԣE%$I`tD'.FKn(Ɛ (@!##rۍZevRZHu+w yF2 {F [! rn+}zy q*G8B !At%MJHRdT(JJ$lv*Az^<׊'?7,2bЈ8P\۾P!F1"|Z09qG 8uE=cC&_n$MuHd= R"UR(Ay]B ^BFne㳍Mf(Aa:.rH">ru_kی.Ǐ?珏wcۓOW?*e4;O^PǷ =>^w_owwx|7#wݿǻg [½w?ko6_AlM8{{ O`g Ԓ,p-Q#jKjD}`\.CCȤ.d,R91a ALBٙ eΠ VL},jsBt|QR(HNҫ]334&$S\&4ƊQFR*a̓ hC T`JHW|+So*33J%/*+[L4^&;9!H$j⮩:iS?$CUm3(J)!(V"ZJV]VvsC4;)ajDFP%#q(jPz;mUBcTz٦Xq)xZ7 HL*YK xջP5М6Tc=ns1زpss՜A1nSmJY]K&j}ÔO0'y^W[ yy uRn]Qj 6fffrG('70V|RގMjW'q Nj@HJ d ȰՅݘ%-r*8X`&$3rx࿡TyA _!R6h %wZ7jY* (aUIMaYiD Й$}(6bTj<\ NEr).8Y߮lWL?TVmap62\>U s1[qze cMTVz`v5=v$ή\?pH#2 U`bA[mDWإ?L48A~g}Â$?ŗX_~]AW^ݾ'@\~C7?h 釔/_|/? |{ɧǗ P( \X_j1(%e#4npȏ:Ay.S1J?+Q1gYԏY4C\"Mb /*TrQS @smô|exFrŘi$.x~snA+-1#YPb{T}5 H؀3%irD3g^q2 .i*.Oɓ6͸|-Rb[ Cn\vfvmy,VOֆ4.ϻ0|Ũk[a{%m1V#07.4˞ǔ],'ja-c,:50O:Oe@,;)yj2&p(ߎ] I2Aƪl6nRr@$ndS19s*$jt8 B{D +]UyGl 3s$RH`:-c!͹l\򹷭NK`;Q'e zGrFΞ>nR%LT~b~Oչma#Rӱ_1dl`ѓ>_ٴIZb+of[t(i@%j:Ae$]/dDYgt VYr uBŒMC2 ]'*:_'4\J3Yz'ZD،LbN4" &4Y:|fV駬޵F ƲQW;Dq'' +֛Kdй#cWɴTt_V6dT~¹#YB1 c̵Nƥ܍KϥamoIGK ɌQJE"A9gV&TNe6+9ʢ+5{`ˬ.w0|OSmpLB"> /\s&e¼DەĤv4yPonxYQo e6$ ZǧѵƊOq#g d铜kq Vʅ>5p c%dJkͩP75<ڔ1Yr%>r8SKB-h&sxTQsƎh`!|b$ $s,S0rj;_20bhvYs൷<`dg9^ g-\G~ٜ~6jh5I9ipyi%Rt-f=s8jląp0y FeJi9j̪A GI(TmQҢp0 vh_d<zYTS ֹOWl&A,4 d~ |ֳ?!ʊK.efo"vsfDSʌxTt xYl\ONG,?HH"-:/:0|hf%m^>2d!=a>f7n fճ<f+WYf=< AvS0<*=n\_Z$1ŃI7mf7 $Ϊaйଦ *٬Ogev]6 ߌ'+4 "&-q n?J}V% 4FcɵH -CKݞJM11AEuW6,[? 9- vMq}lZ5zc!Ak7u+뢰D.uzZŇ_3u'qVLOyOڄ7s7/旂2oxYϤc^txvѪL'joy R0-Fmuj:(ZTwri{e;ՇBQ~]$C/%pH=Vt`:m . o]m5f%o"޺ݽiֳ.!k:K]K抒0P :sQ&ɽ:CL|>붷!i%lak\׉t@*Б8 UK`dyG:x ͪ9mj`W]BV0䲁`XMdi\Q=0ŞA񽲐D.T9\r<(0i%z1R 9X>orwn׌1jCNr H$#+v[Mѕl:@gmJdYH903wm[tZlp!ov5x':-Ա/CI YYϦͷqo tZ6ы',^@^@t)L|(@J'<-ᒈA{C^l]&u^1[Jg&/3[AW@ xe#Z f?LʄW6K #xESɄW4^yW:@0MxۇJTzpth+j^1'PRz)gvLtۏnୟ\0uCd#Ez[I`-[[@KزNke{G N-ӡSlp6"x@ ` dH<].Rol U6вMFȞ@-~h]{~_>62^Ⱥ} iD[>PQuZj]6W+mՓzrO*>N1FA9"7IE=*vz$-V[Kg}FB/HӡώzZFE:AO[6x^QB\6rl&#=o) $"WXn5> y+qI8r-;K7іKw۸6#E3tP9OKJ l. q /dQI2m mYJ+*ݲA3{l-{M!0)5{tYyrP#kSі\=D[.F3ZBc5d>ҡ7iJ# wclg\U s;}T*G rlt#fh@mYly\-`ˆ'[<;=ao_=~暌VQ|M_H^q,+Ł4 UH!PQ僕Zp-`M*YyҪrtRZٓڞ&VGŖ^:i7ꡐp9FsrZ0a[9˙T6uM\ˁn{R;Lm/.pE2(N|=9oQUm6\m!D >-(_гZjiW!8tx7`{)x-?6^ |*ojyBvv# .DX9+[BYj#> fxj_*o\.W:w-Mݗz h#+ Q!MB3*s #xL< BylD--,D5M}n m X|EAz{^jIe0NB<ǾN8gl .anԭ͝&6[joKN7TP(C@Y9=[fvD2?HP2q1Tbم>QbC6"lE^LJ'B-6kP4CVnHo+[F(B^"!\٩G#\1-x ʛMؖ+p4ɳ'ӑ(仏z,On 1Br?:F' ^9UۯEYs_6Z̘䬬ڹz+ M̰Ef$]mf_7<3@jٷxn&}Tozp,_&Ғξ4ame r"[6S\꽭ee"z+˜V;N1V3@i=9.IEY~#.n}?>-'cFjjix݋WT k}޽ 2 k&lH;4XWٗA: FEʴ6AA`0 tR)Z"Enl8lH~=+Jw+vίoA:rMt|z2(\ŗ1žڷYh 5)Z7,n޵ 0{5itRI 7HR7y׊X<i9)^JwOwc.#7߼R #X1Ebk~\k|u{_q=/pnO*OS^Q,Z6'߼zr]x Ty*C-SC &G[ tsZC1OZ}.ZSay.'Z|CA(h ..ޒڟcx@%g:BΖ =M 4"sra4NZ!.vFޢQ?('\x@OjES}]UYP]n0|Tam BCjKM҃"GЕ|y4G ѝWBf搩T1Q燻 ɚ-iV7p,LZvDfE-9%6U$rCj;tyM[LԔ]_\Ījm=R.$>T4dD KRs(܏b~9i[%}hri0#F%*l5$Nͩ'̖i  ')qxy0j97 #ON:ȼ*ʑQ$Bj(HRN$ H"&H%Ym79uUS[o_Gȕ"+$C]jtrơ&ٖc,DZ M X SFa"iS:W%}sev)z4}F{.٥k X! zM]:۴gobE%W#Gۺ=rlplbJrl͇IeW$|r2eB`TO={:%ZP47齐N+G!1ŐaM0Xxtc/X+gCh8${cU&"T|RA{)[t:ir ȕP:BC4}Y]}joqNjYv$ӏZ>p`ˆp˪PVlر5Y ;gNLx'坻Km#{KIWxgŁ5N]u?8>pO+Ӄ].ଂӳT'=[ѳUz7Dxh5>ZxmZ`I?Ĵ&}cL7>}I2x2w/\<]LOp# [gD$=']>.1ꗟ?u K'/Χw7pZW\]8v%K;^OBuc=Nڻh.< HQw*;bt@FRb=ū󃊙pqY#u-Dwl=MRIoO/Qi{ L/׬ ;R|([-eSE#E'jLݥ;u+ci} k1}h7e|G*#Lٙ ƞvJawwn֭/]^.9/ו#_ 7Ѿ ˍTĂ4y'Uw/;C --Ȫ9ptIxVIXDQotXċp ) "?o޽}1&Փ<ߞ<wϿ\$UϵHϟ?燏?|/W}w~z~~޽LJ7^}._#?>߼|7/=}tC{rKKi~~><'w_Hpy'_{{Eoo_}6_Lo_|3t&Zx jۦCV&2HJ?B #tn1p wB-Ľ;d'`Z3GXk,Xl+#0&+P$`l A( JxEٴWtOϘmz,bs(z2< _8h L$3 &=/^m!C*xCVAn X3 C CKH,lZ{TZ#(hW–aN*m T|R\G4oʆ ZkJĪ":B&h3UC^:AH!ȘJ=D`@<#!0U6ӐOߖALoU%kW̒ )͖7`ӹK${HAm3$tҪNRzNf[OW9AV*+ڀ<%7 G+YIEy we0}H$GzApDa H"Du> UY\"Wm*_э 1ʧIP’pH)wҽ :c'=ƐAfL!Ja]bTb;鑏,8\ ,(F/t/qPDl\J1,`*C(1BR@2 ٵR1P$ @ /Z!"}D-&z6W +$հSLIyaYTY ;iaZwAi&5@\UB$Af"\h:DNp⤷*7}?N'TB3 {$ tDY{mn(HPTl Y 5Bt*X}-u-GtQ옦9:J)o: GbzpJ6 Z972|4GP";CN+IDM>2goA+ܱt,Hɞ5kTܱ!wA A.^A\TQ($ -TǓ=n+; MCqOU,;X%}a /S0H:d(Om,iFjȦ,F{ _,B-/ q Vee*. S*T.8zGHpLa5h_2,n`*:j [MerXTP.[Bq1fEEl鋒H:Tf5HqEјl00#2Qճ<-[:(81̐W4C<Qj"4"GasYP{r,KABǥbIfrt=+@78J7&Ti8}+FrFe0a]LZlD UF̳*n"bQE!;kt$Y)u)83zNŤ<F; N]9dI_+"[l`A>Xq,[RM`[euE!ić ( 1*B9ܠ0"ڬ "/A; S 5( 5$`1z T C8uygAj1$#fQxFVx@@/%)'3<)A,sYG.,%5a6zIbAti+93ʸ1K @HRQ !Eݘ1<]*|BjX ^[zӢXIޑZƵb;EJ$]E k l,L<\0ҍ%P,2 9u]/.>mݯC6]Pp}65jDudfEmHz3YAJ"Q:e?ҮXru!7/$^HA\Λ sNWjFc¢SFJ$ա;^HQ>aDhDkbc8-n2e͔"MD>NcN-#`#X4x9F3#EǂޢY,*gN\f =Ne3$ZELQb)~Sruli~B=303K$;X8!2,BYd,~&~V1eqT#4I 6]A 9%##24Dߔ(Ձ҅E"R,dAL9QzU6#n(xl:I՘]NQ  ҈OrởYW mAH"_dЉi1HhvخL[u0`e[!SZ%{umsKD \pё-:LJO|GR1YlbMD䰉w'IləhKR? "12$36bP3| ^>?S@#X}ͻo?Uu?}GL>(";OMs،,TigH:+'R_! DNNM-a!YclbW:gRoF x7)H蕭%-C p'Ԓ–~ޠ0ivF3PpbSouNHi7Jؤ%O*)E}JLfT$ JO%ʯP3ˣ~uT!@?C,̌kR500pGjp[ ǗUFl+Jb~P(Ie(|h낛SuPעaXWt'r["xdh4rL# Xn-nԜ ,y R˦€-Y ёe[(cX0E=y|m\d8[7Tǚ5Ramo0 9PpUXP*sd[-ٳOBʲ=fr$rܒFH-\T,r(p7U)-i @6Fŗl<+Hɚ51n"ssUOt+hF:e)걕kxaB)˛? ;{PRp#xd exs^TTؾJ`VZe6U%cKHjA=ECGMl[&"vE^;6xJIGyiOT% 0G){B<:r.1.Ղ-˟rQhna8;*JR&qq#`7}Ά; ilvTPXwdnYï"e6\gC盨y zjӦ=(} OO b c!ɞӟ@͞CBI\Z[E7'EnhKNV!K+ lv~;ͼ-I[@PamB 7`oY[H;4Ѵu6Z*O*rҪ&2JOڰd-dmZYi^ cEIȸG|j[7z[&T"534ĦԃCjUz=Y $T붭CK2bdg;[-J3s.Xq.'rKm6}M|[T6XNIX}gw0^H f+S P lsu➁a4vcD81a H=~B ~\Wu (mqPUumS]=Uրj1y8T^@'lx{*JN|x{L4E5Kk_ m=+f[nYskf96M{+Jd6KZ2nrf]o`ڰnϲ2a5쑪~CL{+s#ݒ|fI4eUb3v[-vODVeQc Ko -Vj1Dhq؊@ĐuMTdn=5eDfOnzJ p;Rzb0эYߘghEi*i5P_ D;RMy9oJJawQfςytJ-6x3 Sꠞ #KrUmܞ&sxO\VękUTgR !$0dY!` ݔ_Y*PTo{zC 7@ nlSA̓`p{X5Zǐ݌܃=_yRmjC%P247շjfbn2WFU;08%ˎ #ovz!Ub+]E `s1J(Jzwݶk$"wkVn.K1F4nt6ݰ`YP3ѱ1K{Y G`C(|>u7frU5gU dKHlJF&Ƥje~ [SZn.w{\Oa5Nl㚶@,sI5;ƹ>҆h:e|AҔbow:Ϡث2)uCsܔ<: ,c>'O V;Q͵fNr@vHCv|E {Foo`*|Vv cU3zNŤ/~ /~5 (Jߦܿw?}LJo~0}~@i&S\WWx_ Btv K=ED?z`yM`aukSݡc.EG& B8r ;xq#cr)uҏN,UjM :rLe@ІMkP:Z +P6$=ڭl`kų@;9,wXԡ#|d宂-QCMeC S NAL,fA˺}]@'qFҙv1(T>I k'*p9cqNDJcЕ9\~K嚥.{t=RGщzO<hb79&1fF\chf$iW#`+sHtVNi|yn;u#0QФѓ'h, #RHUL5="a;uR'5G} NC”?Bn.FbA_ONR{O!Y<Ʉ% / کʼnC_L\G6䡮׊ga;Nh%ڳ]Ou^MH֑jr_AL7rbuBhC5:E=zKQӆQY)]аew8\n= u8̾ aeytB;p+I/+y! X!Exry+s:0\s$ְɺo_<|/cgZϤAËo4Mz͹4:xk&Dٲsh=vvgYYp=N{3'@Q34Yp+>S3LQbzjlDf詝FLSibTRJ(-:OLlXi*b-ĉS#Bz hI^XS0ct M$rʉ%>ۗ:{g䉟jF5Ji\ua6&rD39rd #Q.]=gz.g1^˜oG?#kkSTjId@ 1}~X&'T0-t.k3sJ˘8::i*Gi 5{z{zGة"{B.'N%f஼'GP rEYMI 1[rأnkȩ&4ʁ-R|*{P=WKܺ,_8@fgSc4}'Yi11&0NC3u6r.Ѭиj [#<6ک;I2,3ͦ&=<ɲV"=qYu:7M^n'&̗$*qt' V"R%䦨)XH;@lf@_lbb`rUfx<%r6]A=8A )ޝzx0e&^W,؄AytC#KRXC7O^_% a4/&e&Q нbr&dD3EVd8 )eJ9,Ѡ)WP +sNL71UŠ'q9TziCZ`WXbR^%u[!\իxesmE2_ _j}XZ-S=aqqޠ_:.RT^ p3*1ڪt׋uOQ ,#kZr̅MfuMʙq/8!\'R7όUMsJ4P+cݤ> twu:8 =4j\hZUUrguiWVVvyu=5mܷrwXb>`KjWa6%q i"UT1'Ъ N:]S"˺,(h@AM|`e"[QKNrnm`^\f{BjQ!d+79TT8zfة fM_L.3n͚APNK\=ZE;)NP@|=h gn96lmTqަ럢ԩ,zH ګh%_ltV6hVj⊙ 0\7Qrj`_]$c'@ml(@\^L_;CI% Z[U ,@8ʜČfUV˞|1NIx0I@ M\&D\inqg7Qe}Ks'>ݎ ]Q pUsDgRE10NjT17vDXFVymV X񍜱( (z4̖o!qMw4ֵTYg6c' =𵄷YQUfrfJsgy*vr;.Bf~vA]?nj>OjV*rZim~;2Ja1QZkH;KCYSj\SsUKC5ReU=N+Ӂ7\A PW80)CۧZܡ4`5ROshz>-ءT_@"EɧXs |TԋE0#!FB:HHp?U&_<;s!"C>?<5}o?J:PY+M+[w5;N{.(mIKd7a UnͩS5*f/b 2K60@E2g@𢬉2$Ld5'k`^i(dw8h,wcѷo+oîFj;؎.O=͑k jADsD{9N s+rx&G BcJy֖ ld6RH ~;lGBzmk;\5Fd:.ǘ! 5iigJCPQn4HElyCrb5ko9rM]5uE|-ע s)wNi}UiC&<sb;k]EmKԐ۝ږco%6lnRnjN셖C\; $u&YRc0Z\^^ϋIP$VfMnh8S9 &M0N,QhX%6jUٜ=ݯ -nU<|۞F]"34R$mMr)rTQc',cCȫ },w圕dPvK̗EC|Y{YFI6Og:g94I:''}_nJ\>V/SO^mћӟtU j_bǛm0^[RwCn,;Wa3<YKǷHF~R0IajTu@G6k'B(7mѐ4":֤Z4ך,NxX9@Wc,X-dͱj-FrW һOHQnR4Y(f-Roɞ) 0 3gx߸:sg{X3k0}͎)~䚝Ր%LnΎ _?,țP,^w(W8Z-CaW3+LNΧݽ|s)5cU? @SE)^A^M:em8)`!}n5eׂ3xji'-%Ҁ<ۗ(Y4z6ekEEY!j޳*|8B>Ap}|15U72^;h ʺNht2FYaZEo8 S#~JL(羽jI1~m;H|E%TK#-O5#hz=1E Ё5_]Q \ f9d權͜ qEk2XQu!fN:.i.W!H~iתC6KI{BCy/}oǑgË{ߏC\GA+sdHoWU?(P3]ǯوg)g䕋ϾP,?_ky6\,}/>Bĵ?ZyK3E9}_ٳUui:/:Z^Z[Z绗~ݛ+N^nnZ?|<ӏ޽կ?<~z}Wzwʨo><~|U}wJd/eO鯮ֶ}H6<=}~_ͷ^<==Ǐ/^w^Mk߽CûW><~x'ߧ/?ߟRKo??~ݮ^oo_~~ųz~__:M_?'R@X>TDQ?2aHtrrNg_ztt{w|('~J5}!]GKBjRyf LV!~d [81]›#}u7v~XF~oj.' a᭍9Z]6Ν#Agw2ƍ}ArfLITi9IIYqzM`..pVa#4*sf񅺙E B|t;]k*GxYݸ,$.U-n ZXRh_ HB>G Ȗ,.3pZIzzjS$Ez^@r{Mw-rkbz-uOa<5j0 ,,S&*J+EuzB_$ V4⇦qs%I-I7$Uim`tdm"#VdE;Nr;i ފTx;B'I 8 HrF=oa4(Z6djeLe],$oGd8^w$T_,hE 0EP5 |zP ٞ1'pBXJI$*YAw<~hBa'UuϠH; ZWdQ@&㙄$Q1?JH1ew ըU4u (*"* 6ǜᐍ]zPR@J<)n,L`9A6 }#MXPv$ x Y%8cHd|T=3Nh{)zFmN١0-[Ͷ;U`I䬡cHَVhz)MGپKhģ=.⓹dٝ eI< 3g8;r7^+ QhNmQ *Ԃ"ނdA޵ٱ͋D{aB&OdV VyD?VGA*$jF@ xfot3Bo I-2!ٌ9b"V3<"߂K\spФ-I)TUNvH`*FXuкv,c40U.L߂!~EѢ0Ҏ vU%уB`c#k-r+'H+T ,/2Bc"٪z4Sѡ)O$ԧmg⨮(5xRIh }U4#-U/kn~Ihq=a㞋a%v4LGsRѧAUعEC0DBSC%U@&iDZnd[tΡנvm.L78]\veewr!tbJ1|p)(sY3zaǛn~9ݽDw-]Tݧk緿s@IO$ߺ\sW?/\}^=c5j:0?C&x&0FRY::&:ySz :Gq\B~n@qKLmXu?2>WuϥpI}mLc2LzZoo 7ŚsP[ӶQtÍ{,=")Nըp$n2\=brBzIOSe| {ݸwHѕZ4+<}!M&ȅ3oʞ12 <>^n) g|6boX~dx 7|J d&I|0cN^k_b,eyޥi/v|^bvATNU1qX|R-ͨ|.NG,%@O7Un:]WGy+z?gB.K:u%X% ]Ytp/ԩ^Q/]ω2=lU2qyVNru ikgʞL3~I֩: ?T̕=bOPsDOh7U7[w^-Ej̙mK!,5€iA60$ WHv[l߀]+h̿BVEKpr.n΄n_4PJmJ=MUĹ* m:Tl=fqص wà v[8rh;š7>kW1kCߕ?bH9| ~ًϞ?S䬉ӬI5ݕueԪ~u55&M/С':#Qd+>U:&mne&^jRrX%).5Ԙ'ONV!k6@1 rlX901[4s RCTyTbO nWm^Lϖb ԞAF˵˶^-amp{?r!YޔuZ(^ {2 mZ]f0},:";Q^Y#3j]*t}:oSWKKj*'g1@#n8ZyQs~/~OºDR$A: edߣbp ^`: b79ѬcGLjN}n}eMW;=kh= K.C9QjGLCCWB Nt-T؀a*~p=a-sNٹs[||Ƕѹ dX#Ejh8&%a 1>!ѕ˰ N4|<$=S.ǃhl s5P{E#g\v̮vjK\ǰ u<My6+sݷVwsQQ=zmQ `A:7Ț ׫ck5**<-s9♆H`g0D!òLfp cO+(K#-j>3\mڏ>{@$keBt;08-yZK>^Pf UcSA DYtuV…$WRSʬxq!.Ix*LQE] /1V_Nȵϵ%\:nhք?<]+!L)99K|'۷۷ş~ Yc\&X3~ǎdk )OAQ f*6wkp> aGFPa`I[1tHW=-qZc0JMM6Wi{;3RSxXwVpQqcy׆E!EjsCOza vu쨫8jEYY7Ï|@_}?IgWn|v!>!QO]?" [/e?~62IeU,VxVHn #kA]Z|X38uEµ=HAkG#M8y_UyNTZjb-~J/D،5 ģ 3NڱHONRnږ.Q$u{ՎFRȺKdR~﷝jȯ 8^g:%x^;{VfyMlޑTϚw$krt׊Si֎*BXnL뙈 sjVrdKVN*7o=xH*v9C5*OgŎH1gK~&k5QMFZي!<Az{4Yk'nΜ1Ώ>LfB{1JɴḙNjoqJ:Aڜung"i,l.a#tcl#o M:b|' 8Gae=̶f_pӱ<GL|lm0sn[C[jƣXQڳS3™m^nW1fqW saJ$eGlqؙ*hAOx9͡% 3dhi.nz.2Pf7&7z|?*;6ׁWsgfxԃx8џ t 2eAr+l a$ilA"pMmk'rͤoorͿ) 7?O1 7^}Ju- BxFyǫE vpsZ=`9p h\bKݏ 5a&h&]@qHkqe!]PdiDn 4žC^< r9bGag+9g6uf8n>5bsl,>bsp(-[[4O3j'w L$2"mL1be8 CHMzm~@̶Cs2q1Y#dGR~%3\6ᦗn$2 'k?ú^Tw]a2ut130;a`6 Cܟjq)wŅϹ iَgr(LW>c%|@cxH'+Ri"[^8=@pX09c1̮L]Lޜܻ2Ϭ3)@&'_7]dADbw9aRcriR !luݠ 0r+Lע˞OJ~vMY_LoBo0Ze[ZZJôò/Q_Ν̘'o1=G\ 7S,ڠ/3-;5s'\c{45r]^LӁ2:ĪI|9DK Ad6bw5Lf"y "(hj9Anß N@r`F nW'O&yveh>.1S {?2Qۣ\*WL]56Rot- F/G*:]$LKss87 ]5} EB=PoMcg y5'7EWW:,`Եq [|'3ۣ/=,4&}WZkB Ert0]4[ "53B$B%!̓l@bΒ$/~UFWGNX=M_/FJreT~uDƬ1v_˓W|xh:G).Yp<쭢=ېOSBZ1ۯgpޢ@QYB$%Վd+2LUD =zK\@D@UD;*M! t}ᆶO A\ˤ5`}5GؓY)MC9pr#O?-<7J }u ͓f16$I;ȓMst{:VDFe { չ٥pv(, X=8ep~8Ц޷%Syiih* I{MPvg.SjƇ 1FZTVgo-=ۻ>+?.>D/?|$\/$ X-j2%!W'X ѓz@m5'K:xy f4:G}0\8[8o.rO `<&43udzAjQh])F @6 ru-S6% YKUV*kR,J[.;"qЅI7GXψJtZ{nk5L%ArMԙPɴveLG2 P)c#NΐVߔF=Ҁ 9֟;ySG㊔?I1 nSV4)i ( ΂0'vQ*g-*`IM*%_}eEݺJyA6dp.%rL9a8*dU d}VrY(]B6g%w7XR[/5jd m:崕VY tڴqHUZvsWuuC6oj^*½w T5hj}K vhRD *Bd!J1h&ctwL7lMVD{?Æw%/%b-'YҥI֎J(VRz JgE/X ײZUШ~փ#nUKec21ji1 |h= SѶFM V6d֥ ^x`> T (R8AePf6ѭxYJ Ddd3@8bF9ٰc"h%[1AuKWau-a5dhX;R|WLZBhpIR'KlE+eUZR*3epu+PX!bZ0S c*ǚ +B#A֨j,wBHNUâY5 U{3?xJs:s#Ta'.;爎 Z Oq~uJgh?7g؁o4=ͥa%'KМK(RpLn7tDAEk[طpæ1̻ f0xl_I>^7@Ma۫'\DA&#:GoVȸ#vۄj%.U^{<kb!OTuyc`JtB3]{De<p4!&?*fL%Ԁm#Zl[%M{А̙-[J}sʄU?{ $KMq^ȫ5<9x -ܘKG ,K^1Zy+K9J}Ɖk.+Ɠ#{ߖ'oAU.a~|T_3kUsr [XlGeFӻ𲲯ۓ(kȦgK1IHAcٞZ:8s`EkiNBQ[ |cG%>@ɉKgÐi86G.O׫.-54P#ާm@IƵٟ\2e; G [TokO=Cmmv;oL2mc8g FpU;=1h#gi6 TJqJl %?MYg> _#2{, Eӣ _DOf)/81-Xh`qZd0 Id%݀Yru%yYkJ:.k&-w<=WR|H:Š 7Vc,wK徻dd@ tD_ݺY gSRү ^yrn@'rlblUP?'ڕ,:ܗ4&fylah* K|r-g &ƄkbΩ`!ӹ]NBq;X2m!Q>Q>$vR-F70V' 9OI! PQu$qJah礰S?8QfX-m!d(0VJuuzyu%a 5d 9$`WwO}{/u L+̼?_}S nB)R4BCs-]5ߏ@ Mf|2I "AM2_e\Ǚ3!ԭ*ߟ?___~8ճ+v?O֝mgœh>^5\y噛du> iMי9Okp>"0NV^&2#23+Qgh.s+<]g:?xOmT 194fû]\X<. ~,|~lUrf6@8a'5XMhJI)W"gg ]-ܽLr|.~js9R8[XU*H<|g{vwӰ}?gqIϢL|_|ChTeHSc.hE*`ܼ{"~R.,WvNײmKk?Lh k_Oς Jz|r/nbYێud$$Dہ3ӈDR%=Ȳ᳏BCtĢX 'zknG׼ "Q3bjaZԓ"RbI5cC;=U ' 'wѲuq붏p?j LH4 9 k.ӞR$HS_ o)g^كT`̌)\u@Ηǂd&MDh"D!OR8K1QZ<:;qȘ3nrq1O6nP)},ʝ1 E ӓgg/dH%\gERݓ$d2plRmĸFb\M?t,S?mVT\7mD[cX nY,֗paC>ZQ鐨d~&l^96p8r,WȪ$od .r؈|-e&P~`t'MHirk4#3pȩ-}h6C6tزD$؁G3t͢2>'G@a&d c+&|Oz_pC8jOB =<=O¾WVTOIsen?Bf{a~ )Fb/HsŮ2RIwmGu'BYzs<~Nb熃V pNQf ؿ~^9M̎P8):pk;ϮK03,tFGwi /SNAv>H3OzzȮ+0YC?E(Y@N#,J`:B-h`^`6{aOd5K0;G))zv#9(㛻<JXfW'Wwg7?xu n> vbZ~~Ƿ_=׻翿xǿgB=w{^(߿}׿+?>/ͫ?=9d{o fᯮRO_7>~Wo?<>>>?_z7/~ |xE7߽x:翿~M)A|oݿzzw盯¯?zvOi} [ FEvYW"-jB@1 wT!;b6}Ը Q"½؀ l"53AZJUQcHu Ԑ% 1wBX8pƝyhq(8^imġR܍3U !s.'_v_o]pIT ]MCj Z;C#;c=0(&LՈ80 R*H[OcrY`k>kb NW7BMj`8d1P.$_͢χc2Sg%~ A^:TDZc׀ >i2{3C͂腸$<5| sfQlt,ReEC@RZ~ 2zo=s 9Zrҳl= BÕ Ef5KwqKbJ6#Za` ~eOzIHxv0)jGb: 18SnAkFu:Pj̠MjLHi VgЮ3) Z vb23D s.={kw`֍t 1(wLZ?@f9UFGي0 # ^ Lٔo{6jK`glQ !+gTfFādKjkvl8@NckIERi^ (i`C,bߒū!{XklbCl u Z"ۊotWaƴOP {g.Ry)H0Oe 6|e ))_0'bn.6&.? ^n?ʫj.aB&m̞< (Um Z&dOb Fl$Z>@DFܥ)D*;ZHⅇSʴ%pJIEsPMS 0lTj(ET5Cϰ?4/GdjCDhjPalGNlFW֜+AVC &!}'2Xid]x*IY(b!ŽY5<$fs ̐,xpS 5GmsG_%Zȓ,5FЮ%.Ԏ! *]Gc6rSGa+/S^)9CS5qFq8KKIM] [v]ؒ7p~bkU 7ͣcBDŽ&[T)<&Eb}<;8E 4i1`}H (~=$I51/}iq9 e$h0dWBnMXU)V=mU0Z"'j f6®Bz|uͪj?Ι yBxM R.E$d}AkAzjLJFԪKEjN"Q%$n7 nՈ1ʆ +|hZڅdXbXn6ϙ IfGOp hFo),=/%0Nk5,S0a@~V WO tzEp'5[ɲA/a?%$\"9U1)bb5{!| D9 Sy(ExՓl__w%w_psw:'uI8yٴ ggݗO;_nyU }-}|GI6~Y@&usb "xS.]Ֆ>>υͮX{!CvJ4x,d%_ {&)MO.po#wD+ -YAxԇ7DP\K HF]I99\qYP#pV"# @h:T( +6x%Z8R,foiaB햊IJNhK/?_-kTH-iiVrHDG1O##FN5W9Z&=nlm'4\V0-Ķza}FBډcfR0N$(#Amc3Gb0ZBLt׎zt%Nz#尘鶅.j#sN<(6 X❨A6EӔ`n?Aڔ&SDhap2uz\6cr'GU*rcpd⨦R[-륔Q"+ J1%`HFt)")ʐxJ ,GTԹwЩk34_3Zk. ]nׄPm^5R·:\NK|@4Npk^SKX~ٝX^7sGNU טuTXEn~c+%-j\{p 5w ~'Y lg`TIr}Z-!\y k-5"PxF](jKĎےZL#K\$."ߧH#GH\RWl./dwÐu4iQTbӂ$WBv ȝ,ֿIrJ s{f9S!Qوt5fB 5"D[nMw.aNQ!Kģ`Jat7ˋ,]39 Ay%NnE-yRT!oX\HNs,b15g^ ̢5y_g7Fׂ`Wn9n¿:f?z?ݯW޿[p1;BP-a gQdGzwv&D f*Fu0%S|G!Ẕ~-yfA] 4St9ЌhUclE#f!Xm!G>Rs;(򃑌IP|ҲCc#McG,1".WNY"q`Ф|?3ŇYP/[Yeg4qa5ɜcZ< 쟅ta5pQ*0u]H}~jwlvtovd MruZ ;S zW# i,G)s!wo6; X/ &JƼK0 l0 ppN<9 "NUZ-&AFoq7$^;_e76ȹ]v82g؝3rڇj% 7_vȍ\#s$C7{"iX'ۅneD(LrBh2g}WC la~H^Jfe`CR!?^-_t`Hrr]*? ԢC0C 8q\`^̹{h4~4b4%JLtH ;9mJYxH/Ы5s47T PEp #dӧt +Tj n=Ϟ6{bID}:6酿按Ck)O?rl͗Osn:vw<?ݿ>Z>jޤ1ծf vүŵZj@K?){9:zԉO'!dB6F.4D]@t8gR[c[KާNˢ勇'7ИǢrZ sa=U::<It}z⤶Msusd7on(U"(T Bh7Б z56F2(L"kp{bvݓԻ XƉEl8,a-GmyTFD4#RF#}y; X')pӒ41-L/X6^Co%%esڻ¡Z &nt<;B0)"+fl}S"Te/cO|$<2p'O"<2Й# <հ}r0i?p,/wZ5R6]j`4(1u;}W z\HD{(;d6 5J%#Lym#bBx`.jKX|]"7 fF، &Vl#N\6tϳew+Li@٨kV= &>:%l.kSϵk,5`lM-.{Mnhx0xJ5ƶjV:3A.AQf<{>y94ڒ[*D?a&NEك)<"fW *_j5lQ6Lv's P@'^5lfjY*_ʈETPƟΧ <Xkҧ[kC?p0Urhyƽuaӵ'uo,wJAb1k(;uBڥX`p;zPlR0 ߫je`rɇ]qhQ X5mo~,FLq;ѕ@iD!Y۹:t0Ѧ#9%FԄiqYgi5ލrh w⪤Uy\,Yέ٫v]VkTsZj[+40JT*[NRqbEve+lls1 M&ntҲ0pc2=m6QC +pNqj2}sh2$4;;2~r ?ɶKx8BUfeQu z!O4]L[Y?yDyلDĉO NC2gYB:vL7Pnl`c? k%(VJDfAzɮcc9I8x4Ct |II3N\s5 '/VBcR"n,%&\!,OK"%&Z4& ޛ*&g8bv96SER3suzruwx7+2%Wd"抌u%: ~ u)>}LQ܇2Ep9c{?QoV%jy"tKƩGpk $-MƧ6Xu'')>SЖ&tA~U:Fi'h 4lVڍ@ Cc.NZ8Kּom5"ܜ,C /\4,2W*XqH֥w z\H(ifuHA&V vҧ]!HHyG{@:( RN J˹d ,CO`&IU` `Kb5$bOT>zNJibg]@g UMIƂ,p 0y^n8J ":8x$WfeF1u.`Y[$z=+ZfM4M&* H`鳼YUvU'qZ Pr\0JR+7\#N}Vud)k: MY$/P!Ԋ Af5lɔMk /';b{,lijk,ɲUsB=TIZ;FU38t:C >zɜ塠Tl"04ץ02U70b&5eF :oRhU]x. FI$ Eat %8]}Q2eg]yv(<kadׂ{Ypm% f;װ, H4:[Yra8dυy 7=FQmZDK ˑ$xTq0aLx\a7XpqHP~%x2A -/`Ah%eFBj`N%#IC!O`+(ݺv"`ZDF Ou*[T&A|%JEMtܵ㪗xHCt3vKbj\#v䡡~i Z (T~ccNPR_UQceȭI~5MFl:(duףg-U!] B֭e\OW'J!>O|W>$:jXWXԀ@ @(?d\=צ%&n@A(OzD@ц˝Y8 L Cq=u29fO/Skւ\ETsLkv}bh`9*C$:理17:&J:ĞPl nw4і%OxETቊP+O$Fa̚n5!#0{.5(_0Eg@kq5qW<@uKESK)GwNQ-Z*-51%Ah@.@ih@tLPcKT6JO/-=t%$; fL5?Q4:Nڞ H:@AB5ӓŶ(آ6lr3H7Tbz8,2ףC[n"T(qQ$F3-b(oW`!φ ~_( ؤ''a[F\F]Tp%j/ \7̆"*9FD,W/\KD>}lPI7˃1 eT_6&B '&r}M4;7+G"r4}nP@Mnu1bh g9NDO@c>c[⸦t`d˕~ BF6%̪|D LrЁ 5ܛh2Gl}Pٴ&fwf d;[8:*lJ+F2pD ngܜ:;4܁4ҚaUCKq4)9)zPci$~8f' % T!\tLWub:`5=FőG|k.1s8plwhvJ$IRC&fQ@KˡT>sEш*A IAL\PMǽfl :uʹ? =7#зwܝ~9 ܁ѐ@6oKہC3@NjM̢gڞ.\NQjK%Y`~=+;K}BM^>}Rg)\oNުnPx?-8]z&}mP~}EnYpd" C;4mMZjk0[$ N t98'ONK+!]R?*=mkV‡z Z٘nhby#T1Rz@<7 M`ˤd&UR6mqZr&-Z'غ' sȗ'WܶTu;M:4X]>!_nLTeHSEE" , 6gzFiݝ>6}qĢ괣 wliZl9Eu:Gf!MOh447 44J+It IgNn,ò%(Fp\a_ yB&U&e v1 g沚JX2t9?Fz@f6@vvSB^ (TEd(t Bɞ6H;Ee-_XBOkzl鉖lD>ZCoCxAd Ӳec7%06 }BNSZs"qvy?HY/GaU\{rl Q!=Ꞑ4hmv2]juU+F,dlU [-,.ҞfV,$C}꿾ޠ?a0y)")2g+v&³ԎB%Mfz-aCg (C:sYU+N)ާl b2эv5Aڪ )V gilJѥdžoZ`,%d⢟yR$pL8zn,s  +K o6< U02lCJ`~A_}|:&߼x?׫?_~uMH%,-ᗪR* IKe@d/<^RɳM u:;%F"%&A]M, H סBs NJ&9MɁMnJ~\B7ͻ׀ԅPZ]:U=8l*98X G)ZEҿd8,_ ֿPrJf)m͇d/K?g/K5`:BTAߋ}U0r@oP_̀m*s`}m6.XGuZynp J$LG8i1)29(Hz*P8`t=?'% kPD9`O^ 2I"c\mT&(WDbQ) v_q-HˁSj/k0*[EaE:CM\-lΣX70G fDXGDb/Ԛ:݊_U9,v٭ڤlKm25kwT0ZmfJ1V@1zИڷP[]jźc #unhI^=L/ZN{vtK6c[u_@D(zvy!^,% D|.~tzKP1F^]Nl}Cb#߽,Ɍ~o/1Lm,c uI* dNutE :XO$PU!Q!磽O  Ib+ҖKUJ!''V>Y}5@ 'J<(_l c]{$6Xef6c-CyA%<-}p_*grm8b+Wb4XMƇF; [w3%D-[4d]2xEK{G++CM?,R&M=W4A\pP54 sz, s ř) eQ(^v , 얋3zlIyJZ+R{CiXY<њ3e0iԃUmޑ.LBU[0}L&8ekyLb]Gc8 3jՎ{3ly'-(vF(:av8v .;<@yd|U zV;7׼;t`*_1j0Ka/5YҘ#ըqɨ3|%qTEnY^XplY7jc k,%,${ %p \ɣe m%:9d+1~1HJ mG!Ux}ZfZ\LSvsƭgbf.|dz |}( 7ZzLzF@9mPlh5T믇_߂Z[Ajxб*3V} Y\ъ0Wk,NTFk ^Gs6T1?`Sbk@vtc-rz>msu/Ϊ S6T6 ؜O= zZ \V2^'Sc@UOFcgThc|rKX. U6GG=]9ٲK{Ӈ޽?*)ȇ?~yKB?|çO߿!2B?^ B=V))h=}xOߵ4ӿo͛OߦU޽tǛOo߼w}{*%J<>\׿~}"QvSo^/T[Ybnz& ˠrh9&]cXIyH RPk= 3k1KcQxp U|.,IyM`a;&Nζ$RUDmu9.6:gf)4 t.~DαiR97PlnLA4V@_&Q<ڪb6vRbYfă.N!`X$N5Cّ0x"8wKJ89iSȉf8^\jLVP ǚʆEN[2^xm 1F-Bδ9գ&kPCC@tN{Q |t"Z*HqˣJM)baBsE$?V>Ղ¼6e$ D%de`\Q?]``ecvNUE9sŕ硣+( Kz;0ƞ[ n`(7S`rwCM%qu @c`Vir<0mA3@3 Q,Ԃhgf}b$2c]2 9Rm+LL –Sܐm23IvrD we ~*IE )'"nsd[$jX| r6W9Pi1 ȍ=ͅLI4A~NygG >n/uiFGU]1ުlT;y3P9]TrTV[!;mP!&SNf|U1-,y%klV>Gِ@Ia̷ԘkT=&&h~L&:HlV e#pXjv7#ea<9! H ^P6U!6f"0d QUS%CJUJZ2 2$EIp Ui'I-DxQ^$_"翻zpzgC!]IW@.*lҎ:6TKK`lZ㠮04DNv5se9 -snɬ%dH)TqrR~MWL_grFl*$P6SF%5c"˼Bl&Uxa6И x,›+uZWܼexצviS*\G] 2GUpkY[tJ;ɬ̏u [n.ؖvKGQUr1ӵfX9E[]kmƬhy@3!l, ח9ܣcnEрqc1_kx\)H-ItTɟ $=wY`2M2+0ƹ"DtɟLN;ZLdj$2ɭ!HϵB&0))զ VQг鉹řNiZ|b6'l?Tg=5b?R sCl$v7&? dsfAȯahtmDemOlV?IŐ>ĒǎMM_ |8%*ⶦu:5o'rso]6fE7/tiævYISji:p^ t*:*+dauWD 9;S'uã53*ln0uJv0:aKҀo3W90ژsfL^58_;BEf@b ph6H'8:!+_ +5co%`1׉/KbgNZ2}zk82-N E~R24gFbv؜fI 9b&lŢ"<ܲ N*-fR9F'E zc:_7؆yI9hͪ o͂p5jrbIgl}kXTtpC0mTk=daNŗ_B,/wtƓa'{e1oXX 4P#B'znr 7%9PƗ=xbC5tXeKFAV>$sg0\s,w D>,B@zJL\Β~^ ѰNJ.ަ8ǚz61{t.tb0'T9*hr,y6}S`h1 6{ j;lX`LmvI xCЊ緔:q 3= 5|5uw㭻]/LoY X)by3L7NapnDz7W5WJo.G"XO:aB-SS:/Ztκ1Yև̰{ UifcqY/1,r48h 瀤T}]KN]?3>ף7g1wtestW yW!h..28 yص5yKapW%C-I_vtVs7tܟƭ\2$_爡Le1r-!n6Sh*x(P,{8<4͍(c+T6bS1O"鱊|{ژZ 7-dX @/3$e:XULcpWy!4fU9P-lB䤦峎Rѳ&jt17텝т&E+߈nE%zk\֌CCTKs(.&5vztĪCq':tCO1K 1J(ǗͽRC8>xlPIވ߂6]0N͛__t~|y{py🗜n7(^;lA @W.*/sYvp ?:+ӵ*1-mdJi9 +ݑ@_8vJ{(v[<1jxY)A[eV:WB*hSx)X1xf0ڏ7NhJta_(p倘>w|mUŋϬu{Қ:IAKHZ:Vu>j3PO@ -LFP줵ؙ>jôY)`cM~gf)8jR~PWL׳chuӾuYH+qbCuK%mUyXop*F>h E`5`ԎV0-ఙVu v{UzO#rt#ar;cu T}c/VV<6]H޵褻ۻܽ_7eo ̾$}u˥VcdTlQ-:edmoD~CX5-7l dy:!m)@~Җo ܧיx토ٌFׇ8x[&^)[-e#,aǚCJ_YLY `ekzȂWkQ̀,3DQPT[\FeVp˱F,dqkpr7TU6*zi]۴[BP]s`kcJ[ q]#隔.憟.͎n{g"r41,l#paa6q4A@Ţ EyRO}%;Rp]My0: ,/ L2IG$Y!O[=#}݊=u,,f]6 BBrDRccKTNM+R2$:VGO.1Yct|@,Մm?at @mk6n0bD0ZF_kI23Vqs:ƪׯʟKZƎ2OHYx鷇7Oy߽{uMMo7ܼyӯ7߁H'pRp'mnoZr,{F ]'q;`h-UDo\,NE0Sq!o=(z_ZfP: ead~3 F3w1>Xsjg \(9(;ܽ1-P8RIfgePY8iF8 l ga\ܙܔ-XVN-=2\)9AXA`6g"~<„il=K A2}@f:3;FrRdAQ i;7q 6ql.;< X X6Tp&h߻w?y谤8 -4_P??zE~tӫ7f7&ӱd@~a5~CPNC|K Ur۟!u!ݚ0T!FȳtH5X:)k%l(l-K8BU—Du=.˨CÓr_]G-]ko7&g8qy(hlM"I ~UlfՊ3ݷI8uj:L3>Ng|6lċL᳴gB_uz - ᳿N* NN:e:>N2.L/󏕆^'zalGߣ+ۙeNEb9SքI5RtFFQc^z~8^a$^'p] aLC~nY&Ņi]sK8x%|3g8L475ъ[z,Mc*!QTOh U:l*| {H᫅ESp":05]lgK9̞GaNϝªirYjVJ-wYvg~,tm+eOأP +rY^2)Ys:gghzN[cXޖa@8b9Q 㰝y10/0 [gd,AOjT v~قB 'gan̋ Fny]dYLik?jr Z ^s/D`wdv/:)q \mL<#-9:ZIJ*`Ӳ#ZPw0lI U#YϰJ g%,[/AH,ir^ZlS p@JQKY )4ԑ S]Tb! icLmp;J[Ξ0 ȩhܹd$}%K 4]~7m_|&KF ΆLwϖ̀`ݙzҰfP Tu'9"֦ʚ%G΀KZ ) 9 `{# NA4<)r|R9mFo@O׃֮zLjw_yS>(jV,z*aW`JTG51RQ f:tOQma=%hY`. ϭ.*{"9׫DlcmL$1 Ja~$C:fd4#]T)fYM_QEAу_)zbԽKJѷ 8|q;Ѝq΋?j6!DT;ʶhGO3G/̠DŽ%Ko.Oo04>ls8x..o<ONO^>9O?=9LM_={_]]]~y{}ys_xu}ww{J!o/o^z:z7??xI[_O/&WOiI?_?U|xÛ?o^zxxx??|;?ƛ/)Dxcp}su/{ۋ۫_o>g_3}n{w&|gWξW/~g?g?O_.$`N9.ްY'ٌ!^sH|:EV8i39P*|N_P΄',ʼn>A/p_OfS;:f]0 IM?!ġ/H.1(.0nƀ.l/iݴ3}/`p dBYE:k 妅VF :fiayRe~.GHd9AG-J%wޣʭo1Hk ` aBn |r^wDBe= #lBW.+k;odDld{`4N>T#=/hUAGp6jlpXjO۱tiKYIM؁D9|AeiWoi͔O O 5RpD3+E{S &k ,|Y%v 4rГLSvD,{#Вk˨AiF̡^R"<\7YQ#gnt$H;Д&\kɔG&˅W3B7?x@HL9mLrciP 5:tZg)`y_)dqSe1OW1 RXkb ZS~a)5@ s8MiXhx`Ӭ;Y'5̴ct(wfvtwdx!;:e2݅-jt2ʜR㼚T) 4kl>Rqee(VgwY18EiVxx QrXTSA3k(Հt/!~HgU_0aEex(3ف_` aDhAO{Hh~i_ =twj`ûFG* c[\n*$"]hH^TrFBiZeCTA,! SW5ЬbG?N!qn(2 <{4:u| B16>bk-뿯N_5cm4k5ً^$Y:"6E\}̂`Pc@7; J@IuM /vDvg+~ Gr9+`_ @U2IUK j.}Bsjk29 CXcW"X jIMGA;CCh/ӘZz]U U%BlVvm)J:\*{auqʙý3UMLfiNBbXL [>2Z ,Ûjepy@ N6jC8i!f^S]ftM%Pj- ƀ2RRK"j!\kikC^6WOE-jFKHRdfƝ QT+nG:i _@۹Ci0`5) NRL, CKųCa ɑLwu}ZBK[rmxbjT#&5 ;E) ^ePXH8k}8#Y}[kɶ]08uY8!,ei6RaB.*'VB 0;N'I5/5|zF[7@d2@Ȉ<"]s+h%[豺koַLjW4z-"?cDh#M4MG4 M,f1 /e0X]i D6v Mv#P  c",,KbBg%*%r1TJcנޜZZCqr!@7b*ڌŽAPO=uib3HTL+i<9ʈHќIj)vՖ`"EFB E$AÃMX$J1!xX)~NipRQc! td@&@U)ƬHS!XQBo2̿"B}hH˦긏(B07!TG@c bEϫII4=d۵*3:#[B%^S]hL RP7y$cOZ[*f*i+fXb_CL+8T"berUAd D2"26 j2cV !W. 4@l M.c*6Ӳ Q $]3!F2[H_J/3n7IHӺ~F6To=6:(D=$eW&X[)3-6*KgsC,$ndx+>oRЖ,Ü8cuN|kFC\r~s+Hb-H\d?NLu䣃e0a|ljBT2-lFՐVʮo2 neXp)d,.u3>Q`d׃UA,1929Z 4&$*nbƷOO6Va^v]v״v5L2!jXfKMKp[e˞{) beMk/8'ϟ&4LM[_ )4+߬94ϡCs&[μS'T[s\ NxB{\{ww i~&<^>DUiyP|- GAZX)@L샸T9`@}ǶD8 6l(.?]5umF ļ>7Ca tR(лuTi掤I^JG K{DZ"s"K5 +*TN;}MЕ2QDMhh-Tu^/6б횇)i`T%ɩQ䱘>"*j>wO&\| &%@Of~T  :P4.APԄ-,xmI9mU@@tc[-9v@KN3=f_\JMޠr@DZ9,r?~?tk{5{n.Exnؔ͞ ]Ǎ}q3HUt9w;{x!")6GYaiFC]$M6Ikp|PmD;Ch 8Ӊhq-nH,<"7Yg/}6Xn %6X6U4+0$Y{u~ћni@kT췺 "*RMt%NJD˂7Z↷`[==BZFvTCGnFj?Ę@TboBTe&TJ"/F67sZo@Ew#׉Rtc:f'ZeTYaMm"-m/,GAݡD5p9LmSp!/Nꕯ=x#kfTkF7{Ov|Ί"RarƪXNɆvF3,na8gƔ*1Q6NQ]c]Dت,ІNjl5֭m0`¦ָ~+mDơCfF@2mbFOƬp.lA{]ٙdZ$X]q6AFZ=Sc@UŤ:[)|mG>LGTVԶ H n lL-uX6ryT1`&UL"QFu8rƙa;EYaJ~LV+dX ˱ٯBQ^mv,q;@+@bHyMUJben'ș[ANX 5"0pWS{3("bDq3/' n"g"'98FeݵabVL培+2 /`b>[>J mes,Sox*#i6ANbt|H(ʤdc)B"X{dl-`Lj!NDO8!lКVG@̕[CKS.S_ӷ0[rLX1E@+/ >`6^%GWi k:6x]'={/cY1 1ܗUz-sjw7M"YObiMMU9ū9fadr<\u-?ۚ kE{=Zaqu}nPXTntnEd߶՚qreE|gGcܷ%̦, &pfeʖcXhct0FJRB&̞\>SSQ㝘A)V'v3D$we~Xc^ZGt"tؽ.-?[Ѝo/ˡv a`0:"xcddʂ;h/e{jc^ZͶLKk*ZǦ`AP+Ӗx=j\Z:+fwV(7:N#u"pev1TSfR$kd'J(&.PS_?v$@x0Hq{F}}HgM([JNF!;M1jğNLHr,`x#/㰹rtъ2k E9ܑpL;j:9ޣ+a)]U c5kml4bbKgR)Tbv/<2s+~9'U2x(LB|>qQTRGv}dn1_ٿfEԏ; ;s\q$HEP9UʬTJŀKR$P o!ͩ+[Y5BR~{!z|ưD^1X4N2qi.+SB/ĩ~"4g:CG*rN4Er=$%M"O:`dZ E ^uۥpąm8|e$mWrC)Ie)g@읉dݲ햷Mud^cٝ۫_A*y:&?z]O->'c]BA"0:l~=xCJej MA"ءhXnAne!yhw4VqT9Ț@‹LS-庰P0QhluǷ6cJף ښ9ytH*;ڀ\&ShXd)ȑ #-}^HK  0dXDe9 gMx/\aVeuq{ #]ӢSxt,A * g{HńcAm.Gä ]4]x3;MhBFmѓ:,DEi/+X{''f?y p"c ##p)bupERB'DeX9^_)7/~/g+Dghfzۯ/rYLN!SfS驰R6?v9LT7w~xuz{}y~xw}2ѷWw^…'|?|쿚s,"?"_lS-F{2=`E ]4/ge+ ޕdFuΝF5i$v#qat)\ȚC^ K{c*7*[ Rc3TmL)@#DT=Q_\Lk`LC ѣI]M-7 2KLQFɕ5l cO w)7\6-k7½=#KC"rX^5^gp3nu:?d$<2L<\ptg߉_?_g%< owTs|pS~p}Xw]UqN¨Lo]_ gc`q etÒ<᳈7 ?6 Ca'smlDe$&;mek,Ϋ/p41s0>s\*xEFgLaya^͢0[Jo8`?9xnŏ']+qA (^O".x8|,ؙs5l1x(~:~!#Q5ANa$I1EIӢ`Z45LQQFa \zyJQxPEaxaˁJSyrpK'.`;-_pxQ3]g͚ MYQkta6Ѯ0᳈/jfdA % bvyE g&)΃؉ԪnԪX9 "γlL8Z2Өi3ba9>Y)?9ׂq{ժwUk?צ1rrPG83ߗ8 7anF9Ƣ_ٓrP6NL/ (`3?Gu} %ȌРK<z(idmqB"y'TEj+,B^;0 .SA5\d\O n`,u(E'Zv19X;V] :]>ྐྵY39؝V^ޢjQvQF ?9^1YԸ \Z vXgXX1+2:`FRdGM1x+/~^?kbѨh3?pc\&ǸLFV=<޽./n_\~z󫗿 e͛OwwBKq㛏>]nˏʯ߿Ipa|8x2׻\=Wu|yuyOor??O^ }xuxWwq o^zSo.ϹçܽW}z޿%\ǻ} ?wܞw_/y/ ~wP`.l't~tlY'[Rd u]Э!0MӚݘN՞X֩3?b]{1Wfp$q1sP/R<7 f_wqPc<K-EA(HВDO.lgE яnݧnWf#6 (u* }U ^&7W | v'_5\* $k .q$࿨ P)@RΨqNIk!r) pR:F`xlSp!3<[u)֕\Bn *j'7xSn.[Z ˷wC6:`kFTåbڿjo7P-$G\2ܣ(j ;@8:AjF8xKA68 B5Cm-~ Gnh_6 ha"04<`lFj#l7rы[G=]j |#Zqs9M6WmsټDubx51* PZPvn6滛PeV.r'G4pM)imàM&(ؾpn%L2SiepR 0/p6O~oA{ v#}|v1ߗ3u&8M''?Y @FMS)X3> .LO3BI^@£3>tDq=ĈlLSzk:N:n6@,c@z0[zoUٲ-k'n) &*2$Dgڥ{:ڽGx}ovA@[_7Z;N8OzGWqq> ;8W2#[ ,SI1j"< ٰ="+Eo^/ҿM"tm, ,:\Zİ5l8-z$41 is9tťfvW.LbՓk!c ۀ:vnG;DO7TO<̮ܖ zܖ +ݭ f YH'ُ{p}$Sal7 M٘I! È3ãwi-ze˗wbICP>1欧Wۖ^*,xGN VWL9"Eo.N?t97z\]>^*qnMgݻww@߿DCۆK&q*j}x2s`^yD#~ 9z` ̂o7AC1?I}ݼÞbUgllLE5aiD`(I2qe_ 6H7aV71͐&DfƄ7э*o d_ U.~AQi;y.XyI|a;AE(]T 6h gOg<'F? 2RT!vVP)PA6O(kMoH>wf7K!|kEY h}3,cUgQN֍kStz"x#3n4du[☋V\s3zFo7o"7œ9IVlKEL5_@+>->4A&mw1qkqҲPMxGɤA? õQ%PxǬJn&\8VHk5_U^;&3i/$p@@vjg݋ 0NɈl׵[Iy̶g?f0|0zwH-$@[Jp0%$ $|!И5>fI<²hVmlR WF%hLb패0 @LU6%gbh"],3炋-5MI2eg5ÖBA~Wk6 yѮx}qud]#Xϸ1ְ9BzsR2zlj&hFu8Y˚ΜZC ա&*.L#Vl,N0b`Z""'aaD1VY CfA%Ƚ<h|X>)XE47Oբ] Axt]G fuA>Vx Bt33m%)~S~ N{Iw53Ѣ:Wj!Qn1%uoy,JV~DVNCX),I1Ck3 u[7@7Ѩ^ 0v_/U͌8sgRY~9rlU !5D$k鶥m7*62R}:1[t7n($5Bzlǩ\-8 A' VբYYZ!<˓΃,OJf׫IMFIy+GU|ȧNTtn@`I[S[mI㺢f_5nb~qR RKk[} rsYTα f\˼tdޮo4ܛ7m˽\/w?Sa?82o̼9{ss 7IKR?{|˛߻)Lyי W?>ݿyI__/F_K,z{`8$nT !!C +=笲y@9)b\T 5H Dp6%)SEhL$%hmT$L2+[ 'J0L˺K#{AЖrMD"I!-aL40^Ι,1I88ShA<-A)m9ubJj@̋<'G|hf9 PCM<( 4O%w$7ȆH–yJK$)-hbp*d_)&N}4t_PF}Eí >.?E [&4/yA}*NY;!YTװO+\ӔLas$Mј{ɔ/+y11w:]o \,bU ;ejƞGTos͇J ~!Θ^)qjq˛;S2+˲-y~+/{PS-+)ddfzM{(:>$*Ÿ*ڥpYPdTV˝ e[iLO `0UG/{VuHo$eAba>h+}mZ/U^+b`RZuh4dѴD!E wv(XVyT"![6âO5dmٰ8*DgbK`SB"E=,i A {L[/5Vk/@x$ȓچ$!bs􁚉Z 'FG=gyO`?*tAԉ_p-WQ (N8OȣiV@SZt"FbD#cQFS'+MV7C_"61&j5Lq1E CQgg}M|syoc!ÿ~Y ~u߽{ r!"̿{9voo>{gno.4ot&zZTH Hx4yjEh`J , J!JY;eŲ#ȍ M[ekT!Օ橍$H/U9WG1/I/И5-Kl~`TZOj[3)Y,fJ6y 4W>vG_gQ) +J[+ 1uK1s"leuD:b)N֡! #sUٮTٞ4uKn@rbY4X5=3NS##{uoOkbtQs({0c1#nR h4&"u$VFpb9R-'ɑA]Z[mO+Mp%-L`}͚9Ep־hJ<R.(zi.kj5HA4r10f KUhrܡ3$YNn^F!n*YHYZN=Zl[SlR4 h 6+‚z "ߴ<U=r4jNiiJvxDƢv;["]v8S \ClSI"̒9"%&ٔ}xSAlVNˡ 8x\A V{:ռ7Tu4;UӠ5;5N8l =5956:\*,Sf`D-G찵 voMq: mRGHT7(ivۏ $a:o0h $qUUeפ}dE1-eֲYS98'tkegU%5B;RSXgBVXnϰE2IR'X xԌ 8֡m^GTbb) 1UQ"=DښDċZ*IH|eHŵUTVե5O,F$ Ab&ɻ`Zqu{xB/{Rc~j^| , 3vd6:Et7oWϹU~\;v|y;30_d?; s?aVe_6(m(dnC<1z__o]'<$oy67^.EmWr֒.MCm(2v$Zbvld;cVL̮Ҁʳ旭WC59 EZR9q?n.cWR_m4@5M1 ѫh*R^-_Wh%b}$c#Ƈ-`.b/OӞ6]O@AޑH׮"k4-:58^"/t '5#*!yd6$"iNb[2 *U%*^Hbr݃]87k[b~CV!,-֣.Nha3PK4 RujŚ5Jz4 qu`\m[ Ւ5oZ_.W 9rClhPIJZFH2cf&mk+&WcT2,gdomֳAm[Я^,HlK$Tž ^h-t6y+ZUiǔ*(" p4STi,·xaDvXײ";17V|uGv,ҭԎv{;gTj J:zfN %*Y;3#BaI`GwR0Vl0F1jZ @jK-yG']-ĤsnF-]kMP.ZWVE=LY)[ýV-.^9+asm8ggs2}dK;^#-W~P)׫>|7?_q,I$b_m^KvKUxYLa*q^M65 V_@,J.,o|r.z_@&^uN owE\\P.WS>oxLr:eju؆#'Glf@„{/Slcaa܏uqy`Ì7z2N&4%/8܎jBC9.}mo7g^`|wOGq x(hm%# ɓoWMlvLէI{=U%YʳOą8/h}_>+q6>,C}뼈IYڳuuӴoY\gm~J7P]7? u>:?PTNg~Ns,~;lNMs<rU+:힇DM* 0&' jp.Ei78[d{ j9 40у33xfi;{3_hiiy?4Ks-ߔ5XMi3Z=e L~Jx|kuH(P׼1oOuv:gޝ?ù7)_ok2C@~@/>+$f_34P$bA!dyK6b[f9y#2t5Nd};d_?q̯Wt~=I`i wȾb 6$|qtā\o ϝr5H]b#Y9ks lfs6C$|Vt8Y,=}q&dNwm:j6wHT~-ofssk0Z#z^$埣9)?tWO%l %3ufu >@0g,++Uz.s7P"2 bO0]uCaJSyh>=X. ]0E}5+yiDq,H |3$ GUo'.cEX Ed 6gv$8$ 0:V# x$GzQsg&ЋUl@2*}Ql̓J:As]R(iTF퉌Λ74Z[a4RU v]F=Z9 Uk$KEv:V]-I-F5vEKoaь@.jɪZdx$hC7UEzJ.j4\zQL+l@i ,:̈́=2 h{iEt5 +͑q66ctWolVKcΠ4mvoE~~ي!7a:/)A8z>Fpg&?OO?yXhpiLhx%zm/EPbQ{7ԢjJ o7(:A,;tU$|FnZ>vuĠb@Ad3 Xƚ_?7OTF:'?^^g_//ʝOǯ?~/7>O׿ݼ݋=~F_]Iy>~yg޽Q^7'%}{wvLA\Hߞ?ç=7/}qO?o>}xݼ>?}x}n>7E9yuU~_~w+?} 6M>ʓ'_/7:.?o^ЗiH]*k? 3D/DKWFQC4Zf25Kyt4>N#9KJ4ٯӸKtr 2\r<;BU.N@Ҫm;N0(܌1NJ:Tw xV@2Ba5g'ո<"HD:.VY7>M?d1.nxF_ϱ^Hܞ[gp251R F1/Zz{NP-̶R"*ڸI \W,Z։5las"0O1gWN=wIS'b.QU,R\ #z;سA1ږ9Ȼfaϭl䘽œ]=^nR}Mߡ-鈇S{٭Z<Ū)jKL0  ۚnʀ l?7S#fW@d'dR )=M@\حU-*OUø]B~ :0:g!7s쳘 y!GSk@g'뿀G%;XuL\ ۖ=Gǻoux'VqT:\>Rkd` IfƆz{iҎ6^ #iW=VǶ.Fgb|f#k)zS93LME(42Wd7 ZD?o^_E-n*xmMZw{.#Y]|VӁX7B(K;/#\׽cQעJNJ j&/$Gs^RZf,y=h!ļ_NN?^Z. H4J넺z J,+9"HyIy͚HbX0 d-695ͼU0tyS\=wۗtt2DTۻDOӼbC0H쩱n,t̀xꐒ 3;Ϸ/( yWs1Rz!E!LEͬ#'j0Sle\>\'LKRhifY6I5C"ٙ줚o_M5 q^WΡt2 '{C>ZHYmdEYnE!9&ڶ9I+|ى1e$5JbY4WVm3in3ldE˔xzT0#ǠdJ53)#MJ5gcyrI tHP!IYn$O%O1bD#3dVQ²O5SBBfɗA%s4S1|4!V50ݽms ,D%nA).QiGgkcһw3ڡB&$i,J&,/=S9@p[g)\6g6;fESxC࡭ əW9RKK])~)IGs(dVB?w47T vR%:R.#?`>EG@5Ǫ-16Ba;kclE~s!*~8;ng,&⑒|7| <8 ?=-0iV+E{O-:ǤOB9Ȕ٠:ч`vZ]}%' U(UaԆf0l°18tvfYж2| L$ 4?I/$ǒ8=-jsP9L{ΰ]TEӁ6Za9She[KƔ15$XbXBAUX;7 KG[icGfRFчXfAK'%f$1'2f 7ŗBs #182al~g[ɲ,qq`Lr6VaNtAJJSahW^KvJt)eRV S󯫔Rչ翹0?F)e؆$ݾs{}ӇwۛR~Jƪk~%~o ,Q(dNb5:CW-Y)hLD9NjW*ٵgL`}!%r:#7ʾ(E`QqWL^7KW>HI)6J1+K 4' ȢDܱ?0vy+K{qFn],Fps\ꉉAhP# 3q%e#cfKZ?M*mR)CP Nd K~{y/Ig 8˖Hɾc,<3ZoA,/J 9C{ݵ>yK ]iIHOh,LSI.5S}Р8H9CI2s%[ z,J'Sp]YT&J- GuW;YܜdJV>vrX$K% n67 ryd,fؖ˽H;Q.MdR%&Mun~'],'{R&Ӻ1oH4BlsX (QV΋JP4;[\v4`zL^7O.@(AC" vL`Q uAEq\}}3ڝc}k 5dM pMl@&ZGaPO >8oot-:]I Crld;Z#5.zvԺCT2iJfT,Ϛ (b"'2y(t݀m.e,3gۊm1=c* 3UN.4x$?eغgcg(6dxġw`_Q)gMN A9^<%Y̵@%22M>O$厇zK$!-~7wb::,ѬMJ<|{qTs _}Ciۻ_v~xw|ۇw4']?O/z޳K݌Qh*o3z2Hr,aj,v*\Ĝc(d/.hR& HtڔF OV6J[ Ɵu;!Ԕk>]G(iH7^H*voNԲGuBnB;1DW'dwc%?V'ee*QYmC4{QqHNVLrT8!z"#pP$ j3,\@@YulReh0be\"z0ZU\ _&|Wٸ4ޗ R Lrذ-AdG q!UV<G< tL賄sob 9stҁRƱgf~Zy9q,ӻ=I+zoЎIKKũRˣPhQ(~TyG mudsN,48/O[z{B 9\&鲌R:f$`3TOt,Vz&šc3-oU˪ 2>ț{da%k$Ԏe ^oat_T4+UG;YJRI yȁwb|懭zB͛78` s~#Ml=$wpBNΒ_]8kD1lJxd7?sjh_vjn y:v=V'\ 7S)4kV: RrvXlέiG2XV}z&Jۉ՛w;G=z> ɜ g!)^zwB T: 'I(("wy8vL)MJvDjXna[̀iv{gL@q~0BQ`Eq)zXv 5{j Ǒ͙R)d1bl~;>d᱑bXKpf@|['K;c9>:3Ln~hC13>;Oް-.NPz D7h)![ҥզ47Ũ"SP@͟Uk~C JŚ8%$Ǎ RmAxp2A촇qM9R;im$bp;xPelIF]ڎ84@;r`)Ϻ3|X(.$IIEM77 UCE9X߽9UeI>J*2dvz2bn V^N#2of5wh8U'ƫpQJ Z-әe&-XP4 m0P #D=륶ND}Hj/)Sh׸ș!SVgH[(ʧe2PPt2y*CU /A{{OBG<^,Ht qT~!m-![ۭ);eC+ҩFr)1:TVi&ii6uW=ۨ;g&n ͳqr7gƇ PYDO eH1u 91I;3ӹ_*sbV A:L4H1jEt_++&@ktGM~rS L[7w=mv+:LOU*\gV"9"payuTD&fm\FN.iQB5N<1IL8K'fO.۽^R'o>=fNtΜLdN׏O/?翹p?Nǿ])؅__g~+eRo&(9%3qe`-&!7n/p)LanlY:Б&r:vOhm0U2˝&MHb0"Xxg6hkp v7ng#T ]2A0n+@씉~h72򨸓S.cMT8|$O<ŪrTsym$XEpΑ[V㓪TKk!s: lƝ3-]mcA#B/<K[IGy) $Z!)1 M%4E\i)0О#䞋\fR7SV ٍ=ζ}y5Ulƥ2'̦O=&hf"nai18P RK]eurS2%ߙ!Q7lQ} 5A ]X͏kD*L%םFΊ%SLgvϻ_>dw/%~ɓqD} }|3%V(w˟VIw/~WW߿x㵾~W{gw5K{yЛw;}>x~?.5=oMP6,2y *9cHV8H$o}[Q1'$$pδo3d~Dm!=#`'@s2rW5Wj@~&?$Ե0ztPRͮj[#1WPȤm @oԜW=)cկcBNB-CTn c`ry-gg[bǤVT=AP}܂Tmi: Žia$Vb~I(Pb/MhNȴFܰ؆{St͢uy[}*7xPd:yWhi=n^ٟ܄ȇg4&?j|lEqRDggIre@;+G#*sN޿\1$N#ǙS]=5Q7la8cS*[w‰Pt#X 1Q Eʏ. ST+|Ahr^KBaP lTqw=ӑU 'r l338'?.fOv QK}, N:hvF.2#`.3-eIlh_aImǿ?)F;U%[A[f` %ZE3h%.l@n?Av %nO9V W *;F/3?Z;A O]\o,dB )MD_,nKyfVBܥz++ԍÂQrarIg {5BCN-}[oǑ>ţ#8:guȔ$0]U}Ik7- ӗ? {G%m/Gq+qT uTGiql'N=?*yeJiJi:i>S8u?d|0\U<@5sf)t_S㚦a }t!))p ߎS[TG}Pq*C:OF#dl|>8NJ4VԺl56GP aTnPld)4]>..҄<,mT:;xM':)~GA|! F;8U6 @l'U00Yu2D0͈P#``&j?hJ=6৭'asfBvقCe `'T $=t{?c-Вpfr1._,{H٢1$. 0O숅]fFdWf1" 0#A' z+=LR@aG[oq;ێ48;Hx ] "lx. aʓ;NClj׋lƅ#&Ѯa٢?Y쯞+tt>|ȤlӵjΛY %<(+̏6km|}!wo oonnCooE~|?ן~s_W~|W:<:ҨmyKm3Q;9 ArM#5zx`Dx-[%T2ULLTdQr>(Aj!2JNΪ3TӲ\\\^U;\9U:<,rA-78_ywy)ZcL#8c?5 CW7<$*g? ~h=`ELd$-00 q%ޭ1e:dqƁOwۋc~`^!a2NT(ц*<#ASc0h;D6\Z nԠz',52ڴ P*(g#$P7NQ܂А9@V>S"Rt>rB&Ʉwܙ m9KcыVwyk zgd]Wq5q2gX4^T̨Kbg2uv z\NKc89*A@! Z[Y2xXHaENq7 ^π  $"um),R!D_(:]b#( BD"Q;/BX,gqGpIFFNa  7r0LnScd}8pq|6|9Dfhfs џpSm,<3xE?[PGT_ QG;c ;GAt0!@P q[14@AЖr甛3:)nuāRI=3_MU._a>PUnY}qF%ֲ er]ƂBn-%QW^>g]{FnāJAym*[%CgՓxqȩfDk L'梉g9g8PΩ CGרsvU9"ݚud>0m3,U]qW:]W3'h1#1g,PܟC^KRowȸ]B3w_b񼽺&Fu@GW(0itMMFp:-[_Բ{mݒ I3`v8b<(0=yH$t móg IZ0\R&x/q_&P$P$䀉LL0q>\}OK^͕?_H~z=b KSS~ww ]ÁgKQ˟;7@0{) M1(DW`/,Käo-@^~!&\w$7_`[GisMXKD~Mc@@_AIQS0%Z42^$U+Z`kuLd+PJRĥYh?ܛ(~XPPl7CgmG:L,EcP8Trx_ (< :k1ZmjsQ:/T+Jm N^G|@2rrָTO3㔆{1V[ uz[@Z~"bxu?QKx׈)q,nS jL Fg접, z3UaE)Ɯ &b{BCJ:C!E5u0 1GaɦѢ ֜bSqUj I, VA 2J-\f-iUDyk$ʊK62\PV,RJQqТ!8\s5 &d`ogKlT7EsLV/xddyIu?T T'mWp /$9}Vxb$^`3U0T0)G $Qcԙk$7D @c܌$ή\#A]pyC{*^j< ZTҲB?Jj:TGJ@˨a\JŰ^ROd[bF2E,.ZUٓ'XS&M>:nhT$뫪'ܮGKHc)]zE97VWWxms?=98?csn}Rdzbr٧@8ß"3r/fnS8nr6S:<$OZQx>lLo!SՖj2v"PUn})])4_wYZ. R$d+?SiS M6eq Pڵk!]r퐓V}2u?p ^^c2 "DB"j S\ǿ{UuaͧS"M){cw@ ΅ggol{>yE.6r!Y!>$i~ՇwҐ(o<0er=b]QB-PHp|BmiZ ΅B3~]^>R w$R 9auf⏇vU6wŽV/(8 Hg*0EO+|،-=-V,e1kH$@XJ19e͑ phJ@80t\R5}̬)vJVCrܐ5aI1f›C3-52?ȃi6J!Qb3MgiBJ-ܜ!]4a7F*X gJ.є+ g7 [A!04ϥ-,DxcFXO&,TVO:'T 1;XJqԄ7]gp;C}zY֏-MxiS2G蠆̀p4бj DEC.;!HLR(d%Q#-;6SW rQ-Boj Jc,^R/94dMNeza*?1P.uavD[l@R#}r y;vBmO +C6@ =̈́L p墴*48K1\sGKK=KQrqKIF+hUߝv[ug(%܂w WeWq}`Qvz~.EJ*,-"4Q yj .&!tUl涱3tӽmVK;<;[N3kq~ؘ.Jjr_(lPHEi}MJ`/$\Om~,Z[}qYNεFdkydbֻOO qal5ա+(߁gU/rqה杽VR<[g[ `[;k ~t%sU|%OjMۈi;$ fV1,j*JpWT)RVݶaJrq .:".3Lﮜ[$P_co,Pbv*OQֽLp֪4GCjk%'T{nBoTyl%at+$\QՋZ\otrfp nrhJ49N/6ʗ)@EZ|IFᑝ0ĵg״j#Nz4_xaf[."Af 2w gPR&~n1`V{hPH"}E[mM>>X nzTNbiٞ`?V 0PG~hNQ7I Zc)j螫䀪 B,)tBym,DTr~Uw(K>&50jR˔u;;,t%L qj b.Oc8 )Pɯ1-[x;|j_b=m%2> ĕipv|%vL1Oj*c(I2Dq_% r϶ 9pLwU"|ƴu!{&л & 9`ċ2jr\u~a[j%YsWUdÇ99{]]n=)S9*(bdͤ1ĽH_G9|#ޯD됅)fʞHna%cB!Nmtq"Bff4x#C³[iP4Uc(mBc`;ɸϤ-a栠^`jSmyӃ5>uuAfNb~ģ[COyRWۓ[cn')/^aFJ׻ǁjKR{n!M3v۾)qڅ'/ t~`tN;(N0tT< i 8<#?ĞKVG15jv? :o1GsqRR n78,ؼZзW>2(U~r@D1~]H!'&Nl^=Xp]# XIv`ڃ%|h0Af+30\..\AR6ߞhZ_iSB\P>-q]%Cj8>`UܚviyJ?҆-\51L#jrk X\UJȎ{ 9n7N;\bGjf}65"cmv0:OڕԒG=8GtT]RɧT{RҭG`4ۺGb)DɝZ 8. ϰ~2*N%ب&L"=PJD&u]`[s_gL9G'RiL"FbW3]ֶ.[ >|tטpἧ*GN،k=ܟj"l;gCzBfr ֟!,;UtzЍǸ_aee9P' e+1y yJSuMbe,'(5%X@Y51S%W7xk=\|3Q')9N?Niy#fT˘e.k4^~>d/vlA2@GX+frnJY=fYiLN%MݙPJzz"o+01kMߚh[N-ڪ24MĻ6`;|nu7ۖNĜ>s6E=x3)&m{4ܕ֝6(ۺ]Ea0a%Z|MDђ[#1c֨ya\ 0L|3Yj .+RnMi 90joA S f$BωLNSVP I-*laِ.DCSCGJw%z_:u󥨈=O9hg+=vঝ.Xzvޭb^ $~ݺ(km ("z`=omk !14C\ׄ PH2 LȅHc Mpq:.EBE OO$͂JĿƦ98vZ49KsƟEfbOy{8f\j-OЬwˎ3^d5㭥w/_Wnq(+a] Ctثo^R!G/}B׿ap)on/wwޟQl5aœF2g.}Nn6k 5M>ŦCm_K :GRZ!: xIBO`̪ՄCخ"rzu֯uop-͝Tt9Y|6*.桫^-f7$Zxkq/JAژO ni 1d݋ 4IuhRYҦu3*0,޾JVc=[YZy_I a6\*NeaNy5cqhbt"ӛUbL!jVmx0q pP!BW1VO0bp/UȜLاIFJ,V+:[-cV{ƹ6$|D}a^*Ug8+]R݇Lͦ SlX5! ّvB6Q8eG.=>Ӎ1LU, Мq$µGhKegW(JxKbVk =ɊAv3g*ZUf0OP08N{[#5=?&>zMkn2T]a)vIijX3lO%+s_ⶳ#3j{1$pâK /R3iلOnQ)gFhXŒ>Q5|mW >[(idJ.]aY+9ms_w1geB<(-! )3o/ŝOÇz~[{X"Y_nS\ݴ0kAQҋK}rr1JOxY Nڦ5A#qA*LiMBIöTw^kCQW7vps/}K"Na{L0ǃ;\uYQ@Q"ABڈEcH-_߾Y.=JG_FPd/ |MfɉŊ pߏQ[cX~pm"dM>ɷ%m5 q$Tl>82LմժHv1-'PTNUH"-M%TOA"!!s߈/ 7Ī%ړr,U>.`8Aq%/ef;Ax3v ฅKbtc"1mMB,2&ʚ2b)|jx:n cgMgۮ=Ǵ;hDuC$հ|WRrI7HDJ8}J\A@ 7ť.M{kQ9e{$ak}ݻ)g훈4F9)j)=>GD'0%["m9rєwtZLSy-(x `,W-eu}Ik+]#)t6`@yMhR| "3hģI%ޥ;]pZ7K·I(U5 JHeL m7(<'z>e:cVt 3ӽX^ymZzHE8Z,4)ZYtօ2GKĞw$|6t=]':Ls^'|B̷^?fdh(jBrIQ-EljDNOO"Ws*VU9$6xtd-Zb9FV!k~}4l}vGؿ\zAv^g5MnlRņULrqOǷG՗$M=TeEoVEVk$Ҥrky4Bx^Q\7;mÅKwZ{ nNhՆU'*Z'¤6/z !Lz<u"B8D\JQ1rb>L1"M [*({*Mll8AYX8bl6]VTh^n#㬕o]7p^R@o#)4q`s;p']X t`TUE&bB'-/5ރTU׵uPYra'5Ңi54@-"4Ȏ~i^N\Dt횺)Nfhz&6.D$C! y^19ӗm[IX""F;EVYD.knU* LDlg) KHnڏBC=}YǑ3pǕ{1dMj^eu Ȝ2%5\ʢƖH]ԩX/P_l{wv~v?+<{_Ls~>}19-'9~ k_ܢ{ o1WԿ?O++Mo%?\V}i+_Ko5_ jwgo8x\^H_F}fOݿ>JˈWPץ{[~Vg} -aS}Tn _?x[Õ?ѷ_j" ZQ7A߽eIv—žod?+)~=d=p_0d"޼o.ӆ%oHNi̻%<MW(nK<-fC7?/| _sNɽx^//^o>n/z¶ѧO۷۷?/?7}S O_}____'Kխ׿۫oT/s7_]{z_>}w?|淟|??_o߾joK}św޼7__7~{5|Wo7o;W/7?/>|q7>?~wg~44ELp몪ș[xNJuzL]:CupEe[  )pd䖼Kb鹺|]2cP ]˺t wK]MĢb{D|pҭ:`2U{֥τDwaaWKHV~}CF@d>H,z6^x  }x`Qq]yQDE'm|}i |ݶ.J=T8|,^^kAIX\SMS]XZ"IC(Z&NJ'ػ}7|$ U= \J2Wa99n#/SɼFbq#8`6G+^_=B }[&]A}PX[w# ޵ZJEĵ 뱀 M|K~:dKlz8J_6_O k6&Dx^P$soTނv/^$8 pE{\@-~e[n$N\Cɩ+~Wa-Jyb 苪bXՍf"pq#-ܕE;0WAR[.yU0/nIt~=WQW]2fƷⳇ\j֬K3Pr Pؘ^;rPCK  z ]f,SO Ί:x0d|( V[A >kP@QEfNP3+PeHՊW6(b`̌)@ n|,5>Q.,GQc"bxn5rH0xjEP7y5FD@;oћND5&C7~@@,h2%JPE^PoT#౎DRFkf gO5{ t:-೤4*:T ڄp<s0%|k^yϯ*FBftr|D}I~A ` &ZBP_rGu " ^aS%(@'Vӝ.D) kvĢ"K 0 ,Ko@rg|kyEjQ ؈P9gBڼQpNa6NJC0}Y`@z^AȳW5ظ4]=; k 3ՖHIEDT?߇y"Sǯ~z879Q?G㟂20[3OtRVDyP6g؁Hآ#&{gA"{JMqGa34 r4&_[ڡcFVc kn{)DJI^I .!RP/w)1 65ȑ6cbZR;ߌ%ռ/rN\?恝QJen) ADOcn)@+ 4`V0gvR6pDƂ|#"b.*=BSqo~$YZgJ φ$9zQs"qEͻ$bxfP<:,/ꕝsFR qBHvxM:\<橜)rh=RPQ v6aLN?U~E=i"l$X8 %G@nfN#JJ8c*)ѣ"*q9#Mri uIwǜT^'܏L00W1GQ4s;RhA 3@0ָ Y$#mIm-aLڪD%У L::n1w3f}tqDhnH)Mg_(n(:$ĸL@Bvjp^_ڜ"=ruҳK5h6AKAXRA[;l%iO}7Q"B$?Vv3NC`F[x;S ? 9!5@'>ZQC1@SpĔ K@<HKkAtw#4 WmT(*Kv9'qux.9lNLǂsgYYdЧ@s83$Y&< 7rDN5UN)=Kr"k5`{-U4DuGQ=a>&l`h.g[K6@ᑽ1$g[:Ge )Ɇ 5RH3hDp׬xs_Sϥs߾%Ǐ?s>BOO}Cps?lnӱ^g@L!]Nš X>hKZ[IꫧcfHo* XN1xx nt$&X| QDRgDiiϣry#N< N)'ƒJ{:MY֝ϝN{0Ŷ}J! 9?+C&+9Mp>C {DCѕDC2 <,L.d.<߱.V9Ppna[ LQ4HǑϕˊϭ"AC|GKApC[pw7]A;CN-8sup1S5W5T,T  Ʉ*mW.nM' Мf ,IP!Ty%(z,~ˀ9<|< Dtkm׼̢ T kPGJ7ӛ^h\KO/t7fܦ30k(SP$5+1p9$^\e1R&[k?ȕ}&ڲ>`׍bq渚S,D DPCm{ ölCd NME]0Z!$v'9l˞dۋۋW. }?(^QowoC˛0Ln>|wlsdNB2Pa@畕}JyLQcGk#Ī9~Tnf@ߓlvB6#>6 Z3~icGgAV2N׫m6j{\lO@7ΤMDhVb a.unPpCu;L˘ILt NS 0̀wN^淭;. a=Qke4~OٛfGŤi k)̔ѓ?I@ɍA;ۿ]a2J:ʩm.g6Dn oUKhG (t菽(,*%k˾~R矔fe wY*͜ :Gm?0Q;޸U$GlJico-$EjddsJ2I.lWP7yu/| ]4j/:٬'oS<0 C4uW8-p֙#h6h>DIxR4(f<*w)%ëyo2\Skg:k2Z~iejǦŴ?-:SjO, 7%\49f+0e>;8!z T-nEc^5ަU囵:}8pVd} gnF>;1V7͋v䜏g\0|jL?#|dm7Z|"7k+U;Rm8c+2j式fg{\߼2- Lmm> yyU<K‚]Tb43H6烫3y7AC\qջ+q-=9D͒fvsfi0sZ_!^1*NfӏgdHΫBJJ9s¸˲)0"{4ǶUO9Sl̙ngjcJQfNP {j=w~3>bX\ѧ,̛ZYy6 mgY)ȥSq~V lPqLQШ@[jyݘISo%"޶NF9 F5C9/{id1G =xA8E8{wf׫㳰 f3Xi曱@C AȉoO$+k1+ǖ?ngY{Wki?JyvB;tRNWh/SԏgW,2j7y2M儩:f(ʄv[yq{}͟~X^ {p}>&v c6h#Lj1pΎ sΜ^ B .CPK4nUœ3whb<Бr^MjL+Z2cy3XY) nTcy3H G]xpQVۗǬmzޚUVOϝoNXoEfAw+k"Lmդ֘#Fuf5';(}\DBq6a Nf_6qfw(eLAgY\GbADs?h Mؾe]vka+X5m-YLG9W|`LdT}S5fB8  Vl(:&ڏ97`eNr'_+V4XA8OsAnAԅ:srRupTŧ }|*VQVG HwZQƒ M[T7'hZr-r%͉͖f`Yg^e@!'ֹ8y:&9WHe%K+`Lbl*2'+ͫ7M q<ǃx^uJk}O<ύ9H:T((5/|I[Q7⎝WEŀW6Th*Nsֵc^6CiCCao&7i89ӧϣ}΢ABLlHs9:JԾm}aS0 ^VpHC*ԷJ3ʦ?cU(Q0yAS[ J:Ynh:f3My7ǩ|(Tatq]u|vlư?bE(Yen¦SK8Z B4x|ý1ԛ\t 0,M!uGY9O3npb |'9Ollb렩9FFkFb6D؉z0?+2\7b1B*Û'LFiQ&mpj`Zul`074j&eI0r3z^&sҨq]fP|EpM~<9XNpƘ勾BODq4j'ha6ڝ c=2"HMX Q-%=tSAG BLBbrplU0AY1ڤ<Bv EDWů` G]" jPIr/0Lu䞃ڜwhp%Y˵Rx<ΕgS>\Sg3A]Qz$[ yTa]۩mVҏvڄ+`Eu{d:TȻv&b&2';k:>449JYL# R棈uL?CK+t#J }yY [yhDHshOuNtPЎ)sMv?yB3?ǟGJ[=SaE%hI,jf^Y)$h=ǽ]'$sȻ[&oU[&njFV!IC@ASIg@0R$f𯒵PX963n<V ,IoM|q/q4]7ͣq5Ԓ x2sΥaG)q#_Bk؆S렠Iԍ`ű4 '/W*%9p 90m#^T=;4JdȻM^/^:v,ɱ^tCOq\t䞤W.̗=Ы?  ]ôLn# ycX7(el#+wΒOrL˙Ejy9MsJV,W0EsG"7L ^Qt t@Q?/0Y]6U 'R<%XE 擁1Ɖ_HDj1j|9:Ws~ K;}~)6_igR*D q& 0/u=Ƅ;DMP2[r,YM3<\a)?9#4!s6'JW/G`^mhԊϚ-VÙ.0bs۶{pS$N3ϳi OPy4fJ]3+OhfӁ jm,!9)Xf_ӋΠ#5eofaՐ6}̌!ປk^ ަ!(k!(ՎgVVƧ 'qmc`Ƹd5όj.S_{_v&z3F :VIsuudhad*_8 Fl0QTmQu fںG;kܮp]_53m{-e8ӣ^kiwUANN;֘)L8dk$[o|3}32OYOi47+0#M'sZvQ@f3FN)2S 8fzuNf)і #@O ]|i2)3MV 3L_sS mNFm74t+!`L.VS@# &A*/ڱێxsG5=UӊbSC)-.$*%3;lGG~6iaG%BZr/Z;-Y:J 3F@L͌R0JcFdsd%l،" ^SO j.{C74n;%Ͻc) +rJϻ5RV#g aBLg J/oF'hҭ6vhL6xx }!1aWC۶㤳AgVT:Qh(, nrtP" .+?$Σ.?EM}X'=9䰏Wܴ@9"Aܘ spq9bss?|Wm?,vt<⌡VVLo`VE:ɒkRHdnvnx,-I0̽h2$^DRv Y'6qM^ؽRZWjlhDϖ g -; C53SWIr@IjC-ƒ,yuPd PoxSoygi@n8.30˜G<\iQ2'C0yQܗTާ!Vv +J~ÒTjXGZ,] o 88ʗ㒣Dڥc#D+%X5<!V0\}-3#sd v5鸧AwqɈ~ͲW[Wq]gCwDdy0~f{T:SPZ?n"͖_աY!穻m}^&݆(ۭTf9뎌.d\ S]4]En[\z@ZnjۿO]E݄gkP^pAwsT4ӛ6AOkO|4X>8[m,$eDn j0 %ڣ p9~\Qƴj"1!N/O;?ӕ pYlgz$r36⥙+Ϝ̐ ˤNWnd^ݫx*SٷL̫?"jG, %Hx>pĜPɐ]]ى[%gsCgf՞l&W'H:Ya]{3.EYf]\傮0 QQ$^ $`ƨYPim2ER3]V1 Ns̑,RKCD ئ~[rVU x`~iGӃ=ܧH\e'YK6#Z}-J6dKf˄^,x/teWФ!PI?Y- ڀ,M3G #sOz/LsF647T ? f>ż,H_hhc˪;, zi84?6Ț k6EƊ>և7rdCtLUsKwaF23C!!G1LMμ7iدIfC\=VYSyCy3ջd_*d|^%~>-MN:0;m~L6+z~35ݦThjSzz75oHX\o/i0ґgD{Z) p8x-`rn-|wG6QIZEhͳ#2w A󶰜?ma*FvΓv -,Z/x cAiv{%g'LCo<+ $\Ƌ=rQB]vK?QCJwW }o~~. 4Q.5D4Kf$a[nP-Pdx"0fB"TmoMb?IL~]bx@39b iz H-8p6U1AOu=,沏Ǽ{/ړn]lu Ҵ;U娬k>ܗ@<\ `)$4h $>ocY+g,P85R A8tܸEG3OK ɶc=A cZj:׏I M;pyZu#iaڕ4~ƩzQ簫uG1Yn}s?m#Ipn-F./g| Emh#0z H\|s35SLmTh# lbKџz'=ϖAxE+0\MĞk@ -N ܃6i`O(kEݼC}alU V e'u1%)kizVdXLur̤lO*W;B9?W~ l'EZ}o#Oje>ЎCsgp y{!>ّ]b"~եfG(4k˱Ub(|p:LV?#L:b$+)%o;Vr G`uTSb ݒ7ɤjp.ը. 2:1]t;4gqyMp6x)#Sqt:d61!<7A ˽A&.B {r-SSG^༷~>5sL&H:v 3BCA}ۮ$Ǖs?'O)Q(Z2=~$43x^Uuɞ&[}23.;]c| Ǜ5k2G哿 )]C>r~xh\u~5KͯK~w5v|__㲍y(0&qWxWg7 ۥ!˥1/4?—ɸ˼=%pln}~]zU_a}Qklb~0ek#4.f+ ܣϯ+3׎2g|pIy4ێ#+2޺&I0%Tn:ϑ5KwzGlx!з]r IgF(eyF;깄6#cn_`]:':Xg>4kge96gmthAQztse]Es7z'}ͧk^v.@{OS iÐdbŞ+j+`#5j2E|jXFS20kv͹f*C 4v7mlP9d-²ޛ&{B-JuV XmYKὛ42=; 9Yf.U,Ԡz`XVJdžMsf3A5'9{nN_I}L|/t]l|޸⍱-33 py>;>[sK5$*  2>tbl|<-_Z<Bf2{~qkCOmLO>Bj]o7W*Mz|6lpa0+LI-b9:3}.64C=JxO}$^Vtzs\%wdp SE^44Xv< 5rqOvg0:ILb3;hfi}@ecʆ(4ݜ2Dn&ò;Cf8&^²V/; ϻ-be>I\Y1Wb7ogF 3}5v뇶;b,L;=2O69;7\d/E` [pٲ[Ƌ|+=] 4EjA(^qh,Q`&6c:4ԑ%ȴ ȁ/$]rE|dBpشqnV~zICT.}D(LFZCK-BƈF8ʜcTJ[~sM|9G7 J $eys|0Io|Wuukv QLM,yȨ&vA^1vL-f(}i^J0f.h {)BZAjZbysSE/,~.,Q_ܦ̓ř0~Ib.QlJz{\B%/z:m%lۣy݃8_j6/V#]6D ti51 Xz.Ay6ue4D=fqz%by?֩;`,<\42a3-WknnzIiRɤr:sSs7;ÐP6T>/|7kzsyOOz_˷մ.m_}򻯿||_}_zU }?_x/?/_glU?O/C~Qfbۧo~޿/}o /O߿zo~ſw]d ߏ?7_/ }g7~||׷O׷~3?^'txlg~3_Dw+r9L5S@E,72M,DQpq{ 0gX2cőyMka09XTz4& J@OdZ@hX,Y;xG/i#r馇ν=ƋcTDEEbd4tBqBFL ua$fNJ lT4@i",F7!d*rD`!-ZAcdK'Ѥ'x2#b0a<t% q©-U|A/#Hn!,1ҫk'cГ,WbPpV4 L]iY!y%ezC)xؖ%bf:^:?F+(D{[X/O"kd6I'S`k0,Wa%O eL^>a0Q+ԳZ`BBE8]'6%x@f+CvNHPޫZm"s`}Uj2\LEM3娡6jUEshɂ/MyAA FY!|;6:W(1'jCuOP]$rK<1ԇ lh{^ښZ >X{ 'ΔSnȬMpD_ts(\ѮeA,u1%ٶ55ArID;&/ 2F l"YRjfH^0^44 SC ;dofO_E-;74(HpJ `ƶqL+u&~8#G 9j9$G憖0'c2E.u{.ęDZng#xA,}@5H=_Eze7>[ƜUVI+w2q @p'-p,ћ00OF0&o J>@LW̻PoOP r`:z@8_m +6aGJ7w`QZJV y-`{iB&g,,wRv NrԸŒ[|$E=) nV޹6[2+Ƌ.˘e2]@}ê9 vU$ .Sy9`%Ng }tYn滫M [9焌HU;vٚZ@M:1“$a#Pz?M#8s^xG2@ Fz&PbKU &mMt3nUx[hdA~̝G'*Hk (B5'@kY{>_y!cv=3hF9sFb>bc")d;DMǼ8_財p,Ac> +:yO0ABMZP?vR@ve8>B`)bMOzB<>Y.sr;P}OѬ- %jTiUOqV'ZkDn&T8L^n)N'WvK*߬͗{-a=gEJi_ޭ˘JEܯeK[)>`iE E,8{˳,A;ZVEmc\η{** ^,B&d8j+y{=RyC.E^/=`+` ]=`[ R-:ųcXtK`Z (]aҗ(Ĝ MMm, 4T# e:w H,D3` p "aKj@a{IQĊIX-,q|&Q^QZ!EwgN'"ixQ>oyU-~f<-Ϲ-ۢBL}Y͞*1lD#)3Vᤳ;0jF+HWA©+Efk!$S(0᜗ar2;=g3Bh O)~ g\w]Yi!=&) \lՕj.$xqܘ+ } q[ ` K%1xߘ%2ZWk6:U%3݁Fs-h{VvPH| p,>B--#%.N̿zl#;l&o(-az}#nD$D+eɟeaeQH rx)ބ8r8;X,m [ P߄ZB2''|Y+Pdoޓ+b)Qufrf5Nr-zhcWZA9.Ÿ8Gbc۳uR X4<ò{g3^Bd+AW y?: ] *y**K%6tUJw u n595S}C+!ޕO+!%C?B<$&c!? _2B|%I3⍢)ftI`|x‡kc=>/ĥ5<G,IxJyDH%L x@L9Ӽ}M]czhp'٭% NDb`hNYp?&8/Ltx:N?0K۴*!.QÓ0J0N9-%EΔX.=:|(_s7=+чGzwVh).5c_CGMΉDx4YJ[/^p5ZgQ1i :mYڦ.t% ?%Z\nxpr4x6=) ΪrٞfVy/_(ʂ?B#$h9C^\0%bTW禈"j Eaϣ%B>ʌ|VVa/T[wHZ\gQ9w6|GwzNqԓ34yZ$x5(5rK,.d)p+?d$ȁz~+Vs ' Ȟ?cӸ˛O߼]o'o~X|o ]w3#?N.K+8O oO[Kn@q`N1%EAs~88|,Ѫ_P(uuNgv/XK'ov~h=\o Iq@GC8v-Z=r Zg l/q3 SLA4H byeHEvZ+*:̒lj rBAR)7 E+]^=8uT`iB{^q,7DpGVP2P%Yѻ|~;'ZHU9fZ\1.g?WpꬷS_QgM2Ĺ҆9P:m14C=#aH]IpfX_GKh8txD|V \apO,^ύ};/79^!x7?p7'iZ3%#%vp-W(6MI+pNl}_Rm;<(Wa/\w+!'R|0p^>&% όxI9~rۏ;WF_ƃ/(+lͻn=]&+ E&[.Q-ny`<+ I|KlNgZ/b>DCtz~M__W']j̥`!"L>R(cL>O  ^BBq0V_?I jHVM`EĔ. 9)/x=fӘ"RF $V$R!Щ!Y$Xd?Od}It! F ph@4:UjDw7-g(ke[;W 8"/F{ԑ\aYz45b 캆p I臥u 'WJZB el +|`k`v9hbpjv2.? R*`bs DC\e^EVEOh>0 Co}a o7YT%$2Ys*aYذºcҞiM6& r|'(ŐJr-:l&o[Wxc [%Oi$=ց^)RHBm4ck{p}miSH0lFH$,mnV|s+cdjPUT֓ YA"-ƀBvA̅OK|܈躄XMR =\}*(r.D6BHRkt\elVnB;1] fD-\DSK/\Y%Q v؛+]ؕA($x/7/ T.cހ6 DUf6KPdz#/Q{ܺ4:_kD~l1 DY%0*g/fAlNl%DA`kJiz\rPh`N ꥰjG?“b1!|AՇt+)/k cƞ'GOاYVI PX:u:`EIaIhC K /la~GSك8.ÌPEkv^%"85R ߴ˞zW:XyyCyH^8gχqz9> dΘQN!uio:]N aa*,?]]# ͫ]":|9]8]g3µ{ !^ZilŴ z*mRS 8rЛ w3Yy*y H0Neư_MʤU()xڋi$qypȲ-ɓA"7Jۂ&# -d ,ZZ ЧOƺq/5k} VN4=+$ov4{Μ*Wh`2 a5! }LSÿ Ǧ] n. 9>V^ϼڑft/"rkE틃?#ÜWށ+Ă\>*7 b}!cR͕KyZB^gֲʶ; Jf>8 <.(VX,:D\50iKllMn9nag*P/̯n)L&+y/Eu.͞scqNkY>h&i ǃQIAN=TX}QgP׮gxxo<'Tъa{ ,-,<4JoSq'<;Ss{u8)cib*+t;%PBĻղx(+o,dn懬17kCwQ?X ~oSa,h(#tb'ǴSvGXUKxRyDK8< qG8'B2T Be<Vӑ lKxKk`7D:% 4E췔?XX!e_o _H uMPd(s9cv f!q. TM[Ŗd ~hnFS )i{?;Z [y(k[ݯ cAɓdzyYTv\^Fo| 7@cV:ǥ`x{@ ~߿| fQk*MJZ/lpjš*gҪ<\knr{M0gMtl&-j."w$}c;]F$Ӄ&̹8Pq@]/Χ2Eː%_tn]Bȃ-j[G<׃fUk?PgO }I?iyRv(*[Y衴D,g@{38lOh4ih;Y*oK/Vnsp*j?,7z5ϝ+cImM.FcܒJ}Լ9^Kg#`l[R=bFq0OA+ɜi,Bƒ2˞xu {CHbB(.l(Oր?ǣ5Q Gm 1q{s(tt`ĥ@frCαd@ jZR 8*EaXg}=62.- sl`[d!Tm(B;*_Ջq۴ \m:XwJE6V,0: ˛w >! k#H?` h(rFfER*0S@^D/Zv`rTgw */9[?]@4RTV!@u!HBX^()n *-`tPfھUZJuvLV UL 1̅')bApǻSdG$VmppRdp~4Wqf1$;˩:ZOΒp{ }O^2= @T,X{d%.y,8РE4Iu_MCZLLmYSZ}^"+[`X ^;:"zOji>^K"[K27P5,FwD eۥ2ucVeUcCCAkg U 66+sx|5ZMh走X (Z'?gi" ܴ2Z Z>\z;y<:/E P]s*K s,Ӱm9BCB}Y\Ǒ3pڟoeM˲2gQd 5%jKF-V}iS"{sr~yJr_SO!vT⩞b?0)Sx uK"r;x )Џ̏SNN̿|q>&Si1){L8B_0|TSN6?Sϝbosʉ2<,ϩ%Eci'3h~H 0RyI/13Zp)hi5a[M:s/UsyPAssJ9wӘceXl-Hpuz;l`w {F:6u~Cy%_ OStA&/$-Ev.sڰzzK4i+ӆЩ=/c 4Z(aSm/yOoHC,@ۢ=٘qk?p$^c2.5X M6_ ͯNvlt ,{cNj?W`>eҴ  QlgZI ߟu|f6i~2у~j5F-a i2Υ0MGF, f R߳];f>f՜?TbIbE{y`+SiԞr94ij6|63ۚ!l-˼9GUNO)̭YhBOs<82BF2kR]g?2}Jǘ Fqt0L#>%zJőPy0f#eZYZː#Ch#&,@ >ˍԈoO.=%]Mdy+sX6rgH''IyZ`Ip|tF Oy۳ܰSք<ҜW+A У9/4/cb,Ș`QMJa>=NVf:.;,o ˢk9Fm͢f'E( IpXTmR]fL68d:%1%$g 8DǘLL-'fm>d D30NNapD/am^l/Z9_RRlؔSH",g,c5dv%`Le7s|n,shxv2 sG^.Lo&66Ԙb% adrXl& 0CȲ=$ω[4gxl fQ b6 ^y7hxA I&gbid0]pZ[f=ٴ='JKn[I1Ui^'f hGID8MFs4w#2$`HtFf Zsfq04 lޜ 6X:72lCBX: {nJ 9o(aC X[J;8\3'"dqZꢺ[9As}dŖgn2E؞o{N. F}ABA;4xa"xҗesy 8)Ftm[s Y,79Z̼4"փ9 :mmlBN`hswP2|]hت5W4ށά!UkN8wCX0I|AqÁd$.B J+Ԩ<@j[M8t43K ᰃT( M:-' ֖O\>w5왜Ą3Ib);YtfLpִĢ1ǐ4 DY$'9 eEop!wɅ*:9)tತ]F*PCA/`VQP]$P,Yݱl CA|5Co>|Mc߇'5i2Çyz÷~O?7o{o߽9w%_οya>ÇwO2pc7~EO|!?>|ٛӫo}~_N;}oWz|翝~7鯿ɩ_vm+Y\Ycot9Édn8 ~ GJ$yc rnQA 4YNs1M'ؒ/֝k ;Zu XV^`%Pq%7.Ő f$ll mZ_:3L;c3.yX$5 ?%g)X^9ƥaƶ: ;d4MB 2dԢp*&7>Qgc5 =hձSMyfQ"6~5/)f&(a- XhRt a"%7EmsnkJby |y'\BM?7 Z͜zG+ t3WsOgx6DtMR|9tWf\RB& hgS}IhԊYhML`z,af3쀥ċp MÓ- ?%(&({p!ŒFwF8"n0Q2 @$먫@LG $$ҢYG>EXI&m&݂R]1)M88jMZc$Ӯu .C<͠(hq[O{&HLzVRĢMt,F#`1c|}7Rb4 gFAq٤HҸsgѥ) C0tHsSa|+;pbQ'uJ` 7HZkStp5K'24 &662AFa)}b74˞-VPě![6#ȜPvIt6OaE'MR 65:'@@7ZqxbJ=|Nv2آz_n$f`B΢ # 3OB7aC~kU*߯[^Vy zMg 0h "(BŠK3c!^09HC:q{oFJ?@RdV1CFETOd?N S.I[ⲃdď;dmY8\Y߬RC)`)?'x~~Z4lL`tG4sKY.V]y]+MLE,+w҇O1Su9bc ("(Pl`]M>{Z?$SUOead%i}Y! [Uҟcqҟy13H"5ZIh`S:a1ł=wsֻ&|-q%KO\ Z~A8Ď'2Ϊ{)k4#ŹVWtGoR6Pb $"7@&jP?0Eh@>Z&aL8ČL}η*翓xf l]HBL˜bdt^pJ-m]Hy~[ )xהzǫGS?4Qi#[bs׌ =ο^s7BBXm6c* )d F nyՋ?[mtO?ӟկ__>7Osz8sr!|?]qu[HfL_w'!~ $c"}0 * ?yk?ܣCk1_&i2cdH?sSEx'a09$4Xq9KTj$ضk8͔ (g_;C ht&4&fr9ek%'+ȽE |K(0_7oRUQQ^oB7 X:RRq"*_1j4dF ]pWͦ0|#c1G |ܦ⇞s*nr@t1_u/ B~ @ Iyhdװڜu$L&#,![af:ʶR nB#jl7|@03ji, ;T"~_5U!$o=V PkTmyl;*LnTuW@KpA %GigN>7).D9;*JU\Tt8f1iᆺ{BM9(5h$glA /@P ,UII3HnYw WBجޛ'UA뽱R*e P PEcWN;\@L !rV*U ƫϚ3k:z|!Ĭw>dZP `&iܓd'Xnvإy/(]1UlG>Z_KQu<毢W3 5|Vsh)@{*\Vv৴J&2v"A5 y ^C[5 ji,`NoZ1!{X[UtpW[#Z&(% UNg3p+20棺9A GzH2ZrS6:z`Z+LKJ{,! :^_H32JXABGU,ϑ4ci{<-OA G-SO_LZS gJh͕T0¬?K мu)Ka7~>_ `9,\ 9otMʦI qJw`VdS촌pnUǓT pAvly?^4_i(]N{*- /A`Ism^u+>ԗ@uZ+O2yTUUrXu$`@?SeB9f;WDLs?().@=87T&`<17`J3spk@sEèj_ *!R <0 mP4$I2eC@qڀ"fktG?Z|CqO4Xb6vt]z@(rOH@ Mz!xUZdxhy g+o 渖>+}@>H0ܑ>UKN`%>r 0;L"U"D೟W"_3n ӫ.='|KJD#1{O.0Dv|,hAv夨Cً Z%BxDMZ(-;,Y6W (6 }E @f{! mkY{JoքM, CJ!b 59@& XEU7f 5vg5j-<}C |ܳ5݈FYؚnLg\9^_0g% O}USʅ]N+IP P];jẏ}1KJ{t%` (ZDpX9|=vO-8;ݙ" n2 V;9N.MZqI]y@%`˴GauA"16.Yu@V{qp5W}٧;ꀲ$'6~Dm$.\wm 6ueNXvYk+$AMՌc֢zN 7>nCG:goeISU/-qN0WmNJl($#[lne>sNi\cy@ja;kj0nyeL$UzTUwirp5@b1#9I.8'G\jFq) xx-v{c. z]_ngi M\'?S\AТ, 4VDMQ{ ^QMP.u$%J n.JcﲥѼ1er8g‴P!P,XfAu &ʍAGq,汞+ !C]ѯb] >Q(`i :\vJa*;bkK M +J@8/q_Vg+jPPR" Sw.d].{7k/\EMwˏ pVU0EZ^5mZTnP^se(%t5 ``i#}V, MȶBSRX'MvBGb►0.pu182gq!dq@hI%\Oy\`{U^M2]t 9Rª8(k8|{5@u+"(dvʻ NW)J!T][J3ŵ^)gyW %Ƌ~|II<[HR$M)AxXHVY?! n:#f` f/])ޝ4!f__n=YVLev9ՕEY+Z_9l$K%wp%и!Dm2O2m +Ḍ,#lKznʳ5e[8`:AtK*ݣS׆#֚e8 +5JX$bfDž+Ra srK[܆F) (4Y5 !߭or9z"h9q7vlJ ?Ւ~ 6Wxtݙn~\-/=3v&9ܽz*5n~u|UyQcؘłG%W}+* (@@~-5K-ouE#͋N2䊀v- i[/XmSpDev Sݑ(]~㪫pD6c  c+5>Ǡk T=') o A@ ,s?A RCBeBt$T@$Ĥ!T2KRx~,ׂl{}U@R~:[O!9`kʵ٨o{XazkP4!mpv@*fqX 6 ;v&OK=^#=Nπ(չg\5Nv֝JП/ JP-a$ަH(Vҵ]PE_ ˂K p~K6gEbHp,^mיDY1j+# ZJ)P@βd@=K s;bc |nbv-ռj5nhn^{VDapAԙH˘$F@},B~[tۭGᣒA."t1= *=*Nma넀`k3JƠB aȡR_?hN֭u몽iݚUͩ"|.?rYhRAn&9Me|n|n'ęK'ںWNN7@KvIո{i#Tʽ Tp 3GH ˭5@MBğ Ю{ܥUNb3?thkUG;\}Ӏ@qns!cMjp5b8nx4@^d4&1n(v;{\d)(E h>zNMW3{][Z=X6Z_H_x@þVU|`gqmjʲ\3kYo©n)ų)i!QnrT+TuDpq>|'zKB)āho1c}zߜxabaRGVaEk~oqu@蛄yKw\vY^9*t{6%V4fŗ*PέIJ'\g=$\L2m!Oq;F 9#@3g Fv[Hd^#maL@HUj yd#{߄ݯg7Y}W{w0/&ݯG|c{x_Q_%2qVY~b +8aj?7\ФR'[S',?P3p!bw(|AY:0" qd&qYc\"nu 6ܸ Jϩ/>-N[/+2>VݯlQ\GU-nj\WceOn5T'~US7"g;L腒 twg{RoڽD SWP]qۡ)^B_tm|7 4I;ng+2q}*{0DB/}1 rv \|'aH Q ۿJdov5äe*n _gUҔj91bOihJ=[[,r\ INqBvCT<聼 }G9Ů.Ÿ J3׎RA Eψ2ޏ Kޏ haxW?48"bOacwB%:wd|'x~5n^ηI[;;zpv%ĕ\/H8i!~S~9g\#IuWvӏک[tErk4Z2tJ_ݟA+ܝDM٪ <[}Q\bl1e 8*3N ]e;fڒuYPv8-k HEw O ߻ts=^2l(nGB_GU*/g7x9;aXpϹ]6JsAsp| ߫jK~Ly?*znֽ]1rl\ϻxR[)8# t]Wm ΢ڌd3ퟛ"cL\ܜBbGRe#1,ݻX*d[TAbj ZaUpd/ΪIP1\Z>&m8[}0 ޻9#8UJOHi,]lX;]9Q]vǽ`峷ND4#M?B5Xd[(i2_ہwޝb4[HpRjVR{q1K]o0$Sh,R ڬ/ _fV׬:! ^`zgnr٥`Y=9W$7Dsab~)%d6~Xʛ%Y͙"=]LjUYqrklD4 Tڵߓ1dVw$,e̸צv90B`#hǶl@d]Heׅ9X$TjvR#\$&I4*sܳVΡv/xIfm{^NRhQme^ToQW pD6k- 2iB-)]Z oٹ(;"צ^ !/뀣n;wsxX%1N)Eii[il$is,w3u'd/!U.jʼ˼jc-]hE (p-5 E,zBc. Zcihpi,-YX1cYfhbTKָaX>F\zAqårWqݥ-h|7Nrjr[>v`wR#r` pw䨗rinG yQţE"ݛe%xJUa4 o{20L)W=.Շ_{|46H>]lU{ZԻ$jQz]f.?ee;#|&51GOc}?ܼփN߃?')27G ;}ӎcxnK{aYycveܢ:〚Ծ1cYۤ4Fhvkҋs^0Vww^ L2|rm)Ը1G HgȜI,yB0q|gXJ gY/W$ɴU[7Vmoc 1cj@/Y:kNU 9J@bUT UJvعu[#ge`I73;Iz^Qk-4G)'rz\=FaisљEڽOhU%|~7_Y'6p['6\?(lFO>d5f ZЄϺvd`W ӵK]=Ad+H6b]բ5̘1✟@J8պŤձX UfKH>*]R1 Á\f׮T4S-Q9LҚ|BYm`ԃP*^PˎAYݴ5!ME>´47(#NDyQvڦnG{iK\ͨ[pEHr^_yXo"h`;YDK$s(H =h)|jWr$mQ>`OXVQ_qw=iG <>N^awarY !ՉE=Ϊfq I#_D)P+5 vrUhq Jft5F"M!vvatVi͘z3rܪŢð: B@<&A#i֭q ņlF@ȟFrY455!59[l_T@czàa D(kwRxYB.O "avqX-]+G=!D%f }N#[1W^Xgk7 J*G`=SqoXl@:x!S,(y,Z3HA[tMC\VJl$/i*hs4֧aj\"\-o'N ϥ3a_h\ZZqVRQ*ieħTu6_[ ^Fœ^*sN]g궔W6N8$ 4W#h ޹hH bТX;]iAE;/QldnNOZX^%EUt,WO+]d]5e 6`$zbX1骢û_g?QP`JN"-(>dbl??ZD9ϣ}y$R(qJqi덢@'zi/a^?OPϊcmJ{b? yֻB/Wq)J'ͯlKKwe A\ .Gsy5H̘+>`*h$h\FoWJyBj3$AN>03zfz Iς,}$ek̡:+Hز: v.PFQPXLX!lMݲM j)^bNOv< *;6O-`[ A xd'lqtLjKV{r.){sx6E'.?>ʴcfI|6J {v)J,ٯtߨD?AlcK23ԟ fִf;܄3Ugi k9g.w# ֐ﰈGj-UKLh1O-/:( ٌqIN۱<?<=?t_3BC+][~S|6Ȳ6'6yy@ ],bO7u4t7dUJ{U 5ƫheϥZ<ըWn{ʥ7xA]Ӄ `io}5 5Wʦ&u2 F`EBAq<>h7F":I#(p A4B-PF0imUIx%7K: +rCMGҸtȼ䭛mCFY/eIkU [H5JtvCZ1fm@D8_>7>xB55})=>; sy I/JpZD}]: i5IJw:^Rpp P TaM,Ã)y+iJ "-R9kV|k(pώ`]3]WVۖ)&S.l[I/I洤b;=i|J&p,=L{~>-O {`q΍Qo4r&IF-^g>)X|Rde8. _I9$p /%'iiF>7*YgXXHS}~Iu u!۫lÓ pg,5k5қ>gsJ5Ey&p2yt✪;m̜ $l>Ewid$Ţ8(o0{Sϧx $Y>+I6Rb,#*Mey:ZXUv7C3!CPI%._nU~ر{%Nɏ% *_+|p̝@s(0400X9'Cnϕ'mC T9ў>T7pܔ<`.gd{%q>p>o>)0: 65l;N9| 5ӭeY'~ m2yQO>B2@)^;i4jְ ACLdg` 6WRU"25NLF#uys[BAs]u2ߐD&N#VuAǽ5 u2m|% eAw^iQY_4-fJFUE'f/[{ i$Z_%i盻HWw^}~|~ۻ__Ozq?[~X*s'ۿ~?|Ooݽzy޽m_n?ԥxՓ{Oy_n~z_߽_/ً/|p'o~~7?<˓o??u?~G19韴=ˬL2r.SgeҞ8=π* 7\tպ\|2k}QIJ?|K7hCyf! .>[llspQ EΥRs{6"OҌs@&z=[ԭ Y btcR@ `e[5.Lra "IՂηĐ,LV_ݮ߰0Ӽb;jz }\5 d ,_&̛CzQ å:Si8 6ۦuW`j2<+t%Ps>Df lZ3@Ym <UerMe-( e\]d$fx3:7κy4!ߎleExfV#/x Ǵ;.q$ZCyHEM; (NF? Тe !fCpIɑR3Rx6zsx]&p\8VQ @GT(Frm\[L:@:N/T/ 57QLb@NQ=Y6vNI Bbu"|Rg+ ekpJpnv1wNFG‚yrᘹMVyo`|@.'B_=a krk(r|8LP 9ҭ{,Oȭ6\nX%bPmj DjB  aw\Us`m4AR"O5[h)PXtmm 0F1k~72U63A/E֓]$s#+=W}sĥԠNNM>l\oI54+ў OSvg r3Ot n.{.=\YTs @BVډCCs؍}`1]aKay5UmtO?@|!\dm?˧T'2kWfNώPZ"0sZ"^Ppۮ]0-/H꫃s7?y$mqHڣ/ bkю0XŲn Zw÷qC8ٖ?g%4 Jcp-3I{ŭgTUr6jyUcʒvLjIsiȌMNxCZ O2ώ)176"퐻bv+ǟj#jqH򜆁UU-aQ$oç+%: Iךo%٭xq9!H\C;UM Le= 8:4@ XRT<8[)uՇR6bxQO b&+ț&3ZՀpe8{8|pYv)(騁DD TT9MI=m;zNv,z! E̥dÁXI1)R,f3ZꌫeCUʡKBZ.]PH ])&XYx0%,I=L/Ӈ)h L%2(4 m^oCiԥ*]nw%F2~O_x] /s2݌jքQ'F`yuΉk!UDj!t7=LMOs^)R\i'fV0 v3XryO Ynb1{TiVhtcSR թW[:iAK`XÒlGccl\&4cڻwָ6dN> 4A^rpHy _-eĭ"IĨ K _n$0gV+vHO%b=et&TeR$tqQ'ܣˣR^ ܄Qwo|sws2cs)_?1 yvI/⫧C濾KYb5}Q6_!?M#~0^ޔ^X©(MIx$!)oZ@p0kł~ Fd$||9 +.pP9V蓝ӯ[%A sd5 ]EamD)"ZϮG7x9C`%1GZBHTʉ( V"0E⠊HU- US B]IdRTX4?\]R?q'X se pAӬs^Fy}M9+RE:ϒOͽ(x< R !="V0x%uL9W}$KRp9lj2LH}aqΛbU;}ޅ6]#^z&ΕSLo`.SH3G4}6h(9YmY/Fd3|C a'%Z#u^.Gij48 㒩}Ng {ϚZ<0ЉCqYj" ;1@4nGkʧoճ R3UdkkT!8me˴_9xFRGv3k8^86k`C,F -v&Qj׎XDYeFjȱzʌ`l(n+ЉUo\A8AK:@CJqB>(- -nWM!cBd;x`Zp2Zn uH5Y$GĶz,Ҋd'qYZXҩye _I&=STȤ7vvEhtVn÷+WcIk 7#:LXn*-ޛ74%u7F;;(|q}1) ZZ;h3X˓7b|73ҋ߽X{vX0!@Oxq|o|"vJ ϱiA..yq hsZF2#]Htzt{5vƨ‹C uϛj\L 5mt jVS@ыvʰtSб@+(Rm)܂ p\<8R}F,ş=M-q? Zg3yO!Ok ejӧh֍.ry+bΏnj3({tl0u-5Tt[(Q ,r\{Azy{""jÝ䙝-@$sMfL[ CTxl.f1l =CNpW #F[Nw񯆖™?Bvй)(ME|D5'SEKb|T~Ck2NdBQ)akIj-o[ 'ryƉ>_-{,;YQ<[I-59 `N \".U8dfۚ*Wr;d.A 3tt00/Vr8E2w:]). `=]xyޚN-z,PnoT04UT[I9Lc/ᖓ*٩qwzvY>ޘV)o g󢹪 L c+qU< ky%G%֞a7mNd쾤C ns4~+my& :y ,u43OK^3x^P1vUom=zL'o9J9AB5(n m`0G ՞ᰗ.]+l0L$ؙOqݳZ40 Vx9NdUl9Iȿʴ;tu>{ (:Uj{Nal-f!/*-toãJ,ouizZgGFB{niąYĩ;JqA翃h%[9a/hR}c՟׏oV7l7>7Ve; Qxz:zKq5lV l=;dڜ3b-*2rC*.oG ]cߌ9ĥ}X)z m>VlLӊץf \朚lZI ;K5WM3DyodM45ijlԞ<_0SUe@b.fA/t.-2S#ܪy!D<`Ҽl>=q1;))M;r*VLOU>)%:f |*ꐑܔ\ yVv"8-3 o33.eFrz̈%1(,:Xe$8lO^]93̜9ۏ3Ezc Lѫ4 qp$O~o™ע[ݥ:!-2EIo`T>sWfr%Ao>zNەVNhGmv<7*>q_?N\0fX͛7/՛۟^·w߾#~!;S6٦{&Z(Hcmh݆3Jl;g}3`HD-m1u𺱍B{`uq5Xx<;D'`8nGnd\gKۛ<$CuN`ʹMxyl߽mK`s$󭙅M ζy<7u=[n}3-a~hH@/K**'i|d_M4P5r>=FUZ6prQ="Eje\H=l\copvaMޘYng<ڢtP}?9㱁 g%N7g7ReJ+!/i~ec)TUi/Aӎ<(<0i~W<4^Ͱ@52ݐ$&Gcڝ4[  Ç+҆"#їHC4IU;TMghצɲe'8RAUuޣBt]cOЀ쇬K F@ d\O!WݳX/H/Fgdꈢf' 0_ A1p{Ld/7S 5 tp ~f 2eޔXKVh, $tL 1^'*E sŸPף J QM+4DRgq̡ &ȉֵu U&i+<T+Mfdq6`yZy!*w7hdiPwB:'MhQ 8 USm̯dl".pHi:pMmԒJXqka1o)i,[`՝{$?A3ᅲ@$f , 04f]GێnE֬*[ޮخ$D$xR P3KDoøƍkE-3[8D|W~P;zxM >7|CY'=x eU/`05;'aY2Ɠ#ٍzgqq&@P*|5xyIr^JÔ4EB;m'{u-iyIf1-UJe"[_ݰwZ x/VoDj{݆bsu y[+Ŭ) %d(YHʬgC  mF<牉.F!ҢxAHLY CqR jGTHU(Hv,W6xE9/HN ~"LW]Amk4ADf.3qtMb/Hk*6> ky<+WZ%T ,cѧXgZ7 HyBjҫtݦUH8Ns آPe!|Vl( < U֖kEP1K44uJv}e]g]%{zo36~!i]|.ZL-ɴ*mb09% ](IWr-jܕlL>:UFӣ{x~K@--ݐnSTBu}2=Tc~{BC.]io7Oqs&ݏ&ٰЏ_G.z&;Xv['yQ"Eꋊ/g_|~o.2"Gg%+=J {ťU~)ܡ/.]9ٞ^_o+nH7h_b=F_Ҷ-}*]PמVBty+JO IV mK˼]>Fjc-W~.kfgK4W|q .=FD^|; xW=xOwDlȇ^,P49t2}abX9m;sB(tfjf<4Cͷ@*o`:O(,mm.l:O+m껥1,J/|>Jf$:CGHg$-k4? Hٲ(Mf=fM}*S42S fW)?_`~)3-}Ogә(29L^ԕ2|m}F>Z=F|}&o~Yi|ъ̄"& H՘#G HQESeb&#"/^%HAP:(4yӉ@VO{ %+}oIV*鬓Y i> G G!{ʒާQ"u*mU[}qYBLtaBbM{HV 3}D`b,l@hvU PaMt~T0Уĕ^vjK4 qU;8%>"O99"qY(1f (lT Q7f2GeVsCVJU +/4fq. E$[!ID@ǩVDV;H,DˌJUKD"76Cgٱs74gHEpSokBORĉAQ=:r#AJ7wPH9}Ə¨~p92D8LluƢ!LIW+.{/~elUdc@hi/qf6:m柦Ͷhp*,EF`Zt` X!ߣ)$`dD nVcV?z3Lѱi-vYH_Di "([AK2}zE7tHw: _O%َ~8RF6}]90W[`;wnsm U_X%e,#2[Pb<Į3c*P#( L2IzDgJ1N}t:1IEBavQl˗pLI8hSƊd`eIrٱMf PݦZC2.r0\ Tg^U >4>ԓQ2 ꢶ;y#gݟO}U>Tn̻`cg:$-+G"kBӜ*x3wQZ c(S4E֋B'Wˉ:q>y@wh';!zЁ\u:=_A4e9xgdhNC̈́LC:ŠzLoߤn??ݧn?ݽyw>x{o>*!]tRMt_3J}n?|}_WrMmwozuw}|oAc8Ԅ 7Ų+sL9FTwE6ɣsj*u? ~(ނ:%q wnU3i~7ۋUhJUl)QexAaλ&B {F^|WG|Ӻ}A!ؤC?(hLZGyUy_ `;鞧4ФRn3GwKܱ+i@^6w͞WÎd2J߻,٧{;'#\l1}RiTfj9d?I`Su\ Ű-F'rCHL+- $6y? f. qSU|DQ'$$p v:btRm-VU< E7.6%مⶀUVYj$uҲtj˜. "G15|HiU-BQ( $QCn[ ®h.dYĴn"%HPgOEO#JT{z&ie!'cWC{a^sf**]GmÍƲei*QM:˥R$b@,0H#""I08"bx&5d2jjܔB4-Ht-.rD=|w[w""P Li3|-n%.UIlzw5jɑqO sfuKOjSs Su #l#UխV|<bH% V$RE^1&iTfcT,&Tl̵H-B: Gb7~#LX q.J 4N4 `%QH$ &ZU@ֆyPaGpHُ9ʠ>Wu^Mue?-)"1O9inI0Yx\n"=}ek%)/#MwdEܐ΍vC>)"1Ȉѻ_)n "'Plo2%! 4tv8+]s{Cl2ނUۥ=$A4>@\=vc9W Pľ R|ocR9_r_8 &.۸^}K.'"=nA3)!WkӠLw5GU {/xHʌ5Y+[ܓHv7|ٌΞ}S = fҌMinOfrDT˫4 +ޡs&LI ^2DL=@&ӳHe CKNNM@xR+W$4?*K1\Bג.4%WKbFshR=4g4s + EbVWV'HT>6 z.?҈_ƈg7zxվ}~w?>5ʙR4вgDQɣ>ydmBbKV}\`P(6V=\Gt[3@ =cf7ĉ@'铗&+ɯEL hK`!\1!!C̍@bRdF$%n, ׽OZs(`.h<=i8lp" B[σgAhAh[vc:iϿ _ҏ7OmПW>C/[G-iE9ª飬!76Wׂ%ivɴBi* VC%fL\cY0eQ$U/Ŧδހ66[`p;4-o:;@t/)nTfQsiӒyǐgp_uw:Gm)=?8\EzTn2%-'Pʓn>.`Z#S5(]K<ّk1nTf ]k(RҕU6wktNsk~6S1ϐaWΔRHu9);xq5?ޜmA_ڣ{C/ʱt$UYm7bkVV'13 nۀӵ"u^uTPxb&,J; Z{-8o: J.pդk'=3[C/n:JZ9̾\nA-՝f\'7Zc1MmY~@rBq^-φUUe=:i/E>Vb%6tv)95_e/nDK~1F\OWW|_Ns/-]]9NwPp{YQjCOlyÔۍ,JJԫ tGdf&- Aup|Nn-`JdU$"3i`k`zkp!ϓ6 i'+=?p;^W SLn.fM9<ʟj?!,Zvv-AIvlZ_\Q ⢍by`sgFpMa[^k^1~XqåGn{imG+ٶ[fhxJFgZ?yNGZr~)Jk Dy :n:p ﯾOFcW&~xq% ?B_xig$o򙧳UD e,p^.` (.K?NeЅX1\_|!f>/#~^/˯BԆSB.^ly})uy ^L[Z.g\Gꌻ e^:yLet,hF衙>ԏ4j5 c%"]]뙲ZE\C~r ] 7l=GyD֊sP9Ä Tw8!\3Mt7dPUP! `$(E>/u\ߧ,m`> a" ΚCw4ciXQ j /6y1Vjx}ǣ N eO?Obxuw׆=\hdZقKu"L?sm('74ި8l 3bv(j"4Mo50Ja("󔖡\cg4 24c|.\""'扗|ٖlqp)ցdmVѧ5H znl ,ùJ|94'њ: >dCNМNnEe0DU( Ů%D^ %ɰ/t칒NS v2Dj1QZe\ވq$YC|m)?J h,,Q<{>Q uЂ™-7Ӓ%o:0v:]͜а qI6ZNOFTvn(q5pĵbm]0hC{ɧɧGɬFH^{?߽yǻw=p$QokD}Y;W/jIwҎ3[lE%mh{=5t^ݻ V޸Y0*0,Vfw$èVEړ.9Rm/|ʽrpD# ]]9a;G`Tn0 H1Zo.|R>Jawo}qGfMB`}-YbҊ C"z3h$SWYN0,ɰ2ۣpyA<Ӡ>k{f@NdўaW FT6p=9>ӻButӻ10ބX< djP9V1?ڣo S/w#8:=hSϕq}0el9(I| i!Mp)r'D7L۸+XKװ 0˞P؇ʐL?BE-ֺ[LӅvqnUIgwbT䱪pIי)3m-իpv̶X[ʤkH+LT`nAoX]H, ]\ b7 ؊JCN;j2ֳDVIK’?ВAY\(*HRB"Ôn}Bl[EV̞л"S`k"R.C@cRްUPg1N{ Y/ b0@8?swҀ5>MMӽp )J1NWS{Ms&Sכ~ꏼm䑻^YL1@:B`6O \_{^݉Up,=p)cݹ݊jVrqB3" f6"ł,g;YXC&onI^j>sz$)g%I@=b&- jXo-=,%i&<TU (CiYߜ99vH3B< IL[&O|ҴR6]i_ Պ*HŞĜAmpGMjaVX8+:oR2dQoaHX~BpdΎj)K\ͤΪ`}onTrvhP-z̭hOX)|7JkRbgqͦ%N><\vNﶨMT³v2ٝα QK\#Y mN׍%|͵o^ ^ ,8&%T=9a쩪pߤ@JhF> h6%+s;%{}uл=V$>>(RsޱcNR]:5Uuz|?d2 7=f'I:,\kOh&n Ɓ6C$ 1c/H,}J:#:JGa 5izu:|sw I#وkgXG<д+kBpZh6tU!{;cFv4tDÆCgaWwèA-NϘau0Ofm: %O4σ?yu^(!T 5 _#}+im!iT}w#a/?ǧ^po>= @g|3O?׏sfeܝBC/+][s6~hȓr4M$8ڝG8.lΏ_<$Nv7c<$q:83! ?G5Ї4[pWϔ_/裙/6<`*z8pw X0/聾5ī=LXV^30'5p-קG=Txa +(#~!\wFvHK _à_Co ]˜}0Z?֛ a`C vqʱi=jX /fpy93eG≉N"ɨ.l ҃?+tA~~@a#lYu$'6zUnnэ,Uއ+'>Fo?}y CAn~xb>^m‚|x<`'lDJ½44- .^e8ů ]И:"2 >d.pބ%@:]dRn7LmQv/ ',E%V( .SUW 4Iux=H:P F0")Ɏ[cQ=qd;;/B|O5)| 0(|hgSN8\@ ;hI+a;hty% Lx($a_)RjY1PQbԎ ,b=A##SͯI鸆K/65;F"kp0vӅm&%fK4%m@1(Y8 !? X禓!?/(3.֬Eyznz r=N'Yo N0r[qZ'H<é|rZiۡ z qD#RWZՠD!ƒ M B-Vo |A5l': @@hgڬx 2nQ)<7SȚhh}PGKee&qQE ĵIprl&~^|4N(1v82Add~|j IQx%PðftDːFfP/|XfS$M6|['mfꩡ7Q 9m[d(t;<#r%}Zc #ZESOM3OΠ"4YO!Isn}4`jY<$QHIB򠥞[r2)څ\Ѓ>"6F1 JjG$=BV ^2 hD1'+lZ>-=YD!= "wC* M՝GwâLP$Ƥ cmP) F&Q0U(*Aޞ'- 퉂 [lC XI) '_~~e7̑tCx.O9f,j |7{|sO˟|;8 _a?~|qyϷ}z{rO; hܦw=}tͧ_N7m><;%LonN>}0Z?OSO7~~﾿z}:^7?wo>|yx>,×ӏo?/9!7'{-Ӈ7W\ݼez6]㷯߽Wuϯ }.\bf1_ u M+ Tju]ẑcW_!_ H ~çzp/knn|ۈp̆z B&^LxLC}!" .u:,J 7󞰀M ܻhC\~("i~AK9|,o`FY4g¸^u)Ue/ޡWm +\mv$L }{$ &hfAHQ~..{,HJj׺c0$BY$z=^es8Z @5#Gh4װtGyw: t1aq\UP0?}")A߸~:.I#忊1H"yQ4 ݨy?\ ZL"/eqsjR~k1ё"ƹYiBsG;?2AqZܮxλqȚ<E:7ݒ #/%y"Y0ǐb-šd3-`W17\?v*xBVE _($ kXgx^pf%{ˉ7lRV'f}bh ENɉC+ Q46(;dP=WY(m) -h${!Tz-P-ʦ+8]Ȓx)Y_) I`FahBqmK:k,R`CV3Ղuw!`Sf 놼r , sg-ïRj)a|1a &i%Zd+}TH*jQ/ PmCOSA%e 5%ht"E 4hbeiT~OsB]\WQ6hg g;'Cu01r#wwϬɗsy*j 5TDgk撓v؞2Y.w\su1O4o`xR2%1$IHczYN[7b5Q텧QBa񢕛RoP(W^HA1395o䕞ۄ TmCc1ʑ#4}~ojJf`9.|~MԩXP[X덥c7XegfUEAdIF#.qpɅl'HH?%QU4æQى*mUws\Zp+ ER,ebN9YD $ؚ+dSQF%@gR"'1s)~ Trfs)T2r}zxrÛO><<ûdwoi+3`_ o?MOEn76}UudNK[Y#]Yo%_Eh Z2Ҳı KQĞ~loY7~I{r2w܂]`U`,E`RnŃK j9Y-y;𺋆y="8eL:f2K)˅b/uJt:- a2+_x]0zToӜ{ \Ç\׭Xb\wAp@Ph,i<:KQhqئJSYI$:ԮJfVlLܕaBVbڳrEZJ=^a gWuOq =RvATq=֒R k/[2 ȶm;PIXBiAs ,4]喌}oD?[FWk zQZU, Oe(h% "p%ӽL"Wl櫓Jl?JUZZ߬YK6*x׮16ǂ *Vzc+T:EXD{RUB=JRd, C~ks\dD^&{Vڐh! J*|\ fڄ2QXj|"}_u-VwYh5V _}k-I"Ț%kZFlo-S~Z᠕=*`dosuk`RPY5~??6D('AAT~ XB+r$%ʕز>7$LPDI!sL--[y3n8y(G|*t,p?g$ ) )b@=a2F1ud˼]n~lNg4+ ~@TWO L \7-?:h]p JxS &qvxHAB< x sDtQ%wP gݩ{zQ,W%/-2w HδFp'AQA*rp.qw?Ad^vɽ?{ulb1BH^>V2I\<>zwS= dV,YNԒ~JDxKa/9  tn0}d[pWTqgbȐ, ?~勉:(!t0"c\R_/w2T(K'Xq!tS`_(LA4(q la ٛ O?f ao+C{k bƏSi`?=FNCnW 'WVor96sΚjѾ: kc'RMqs U3UEZ4uiB^GɋT8WE\GE 鵣1x YVR EE)yDzA=xfծyWrǾdhFY̌ Om|xtiɎ(%Í i:V%D.ᔃgjR) Rўb5U?S6=@e ˧ɣo0^Lr"Ʒ ĵ!d58N2'$AS0T6N/ B,IJ`B. %5LR>2Hvv30D߳ 1ȞTVo’],1jm:+i\ԧE MhM6l,^J&z'V&%Ƴga7B9͒.iK"2@v~:(R85qؠXPOO9wt H`LN j|7gIVSLT/GlBd;u_DN+06=Ӽhc!KW騜Z{ S[E#ܕ"['wcLPhddkY')2D'^6{qPyNAad/yk+N#1>gI۫ח7W>4Iݜ'u<[I_OoN?WڜNzٟ_~{[xwg9Ҹ#}~{7o|? OH>폝Gր%PfXEa65  vzpm+c kzO 6%{fv;;WB)h&DZ}Ꙛ[na.leT(fAZl)x 0YqX'D\@6РΈ)96CMY5Up)vV& t%9P`Zy*j#m}Oha ``kѴ>x[MI,pG}FPrK@ټ]iFlћ#@ tq-݌0:\]ݭUކxo 7Sv؃QFkD ߞrh56b @a  =narag{FA& ]ZI©I7AIMkAܪ[nM`)Sw&,hF `mZۼYI `44 7jPBZ DQZ+Cen=U@o*c,>`tqj'Xsy3Qx_M_%P)#80j g1dxAk(2aUql˺uC3ΩC+XgB OMu>$hgHՒ]_Jh 2)# 'έ\yP~$8B@$};WӇtر`yм=QDں\~^:R6|;ʄ&_s&%\-iVYl :ƶ ׀Ԇww'-!d_ 44S@w ml*\WĴkS]6+s@dlNٚm~8lͳQhk`4`aOWv@h\0%E2IҜK֜Ca[M_N!p\a:hƺ5\ ӛ?6d]~z?`g}<[MqЬfSn6DcD5XQ Y/ԑ l~./TchQ YfL Bǹcdlnhfȧ R3WWBĥ4`M+0Lb+2¼ !u*kyd>“/5wj,%&yҌ)6 MgG"ع+HtZ<@:zUigEҩo3Վ #cH:yZIq,+}x(0 +YEO؁(C6uˀ,b~ȏB@Gu;-z^t qtcf"@/-,;-o{YѰ*bD)!?%ljNT4J\KLTK;Rn9v 9XY!R3<:SƱh T.5 >F O%IS$U9U)xltBhdլ٦?\DKtlTo`h| ΤT)ㆉSO(dF`ZbMK:?mPԅmb`RVeWmEbqmVQW$ӅwlXt"殂Ҍ*]\hhLj޸ .u?gѓ^)P3zŁ/RC:YV|얂03piUlcI8L"~׼5W<ILB " IY@L9t*p}5u1r~4g,v^g/Z1=R*zSc;=֩h=\syxx'=<7r1}ħS Ox_~/_ܽz̳łj+p6YI( M!E F6=ΐhdkZJOKS3آ'H@2%xyoZ Ŏ Q "Q}k\oJˀu$g;|; &Sgȋ8mGuʙb}x+vk^h=RZ Xj%:1 ٝc삺' q(嶵jE4<fuc3E_PѦeeJߠ7rN/cI<@ʧoƂԗ;@J,f} E{ԙ\KN(cwdL1A*Z^ExEqB&aBLn:qUx|:K4=,zŀf#3CnQOGA)q1nd:%iBsA`$J`N=zꞗ"dȌ+piGiY` tu9:>\0Zvl'ζ7z)K(׾eP+fwfh5-$b$mwHPBv{k8Z{CÑ.(Prt͓Zc-8mU%jwz"/8!Мᅺ0F-]{]DV\^zRMbNH\dddlJ=BcqB =4t2J*JhX2TX_GjFF3$X25ܸ* }({B)oA_CrbVn>tj$mSLv'D8v0c%?s F`(+}8@ C@Vݒ7i*|ePq3Wa$,*lu%9<"lo>}<|^N>7 +zG$6ħS Oxs?ǿ}{}MCy!|ZsxWR\9LGAb'xV W2Bw1W J(L!i[PPf_M8 kl [kT Ict'^ޜfs6vt 4Mucg&cwvJ7 KNhff4(8[vR(f3sU\,jGȓM9d-FMx֠CwM7f]4Oe&)9ώ*n| ;WőωLi<( !clPI="M`YMjPl1~\M3b"0ScvH i 4sBMOش$dZMPi/Y-ϹLJE@sϬ|%04L[CR=X4'@lw7UbD%B',&]8>}h~L'=(!]b}D0Z\?T ]9v?{VM'\a gG(NZNREK Ke 5'$mHUfj.z)0R' CY{{^Z1 _NYٹv+ꮎ~IiOa5&_I#iF$37L ܧ{"xq7|iuaSϐ Ϙ 0]}u#" 0kAB¶ YXLLؐ@Ga9<\MBԝ}B\'i3}'OddS<@O OBk;L箺s٠7o2/Ͼ}wo?oo}_7~w϶ǺCtUtm>>>O"eZT}}ַkw>stͷp<\<6z2<,mxã}X[:ߗ/h~0H׊ޝG1/a^}kSh:ye VFӾ+!F젡Y6.mɴ˓nnYY)ɺҸ6-ܦ:"OYÊtN95gʀ,ݺЕfV/u3}& @ ~Q@e׸-_+2Ϸmyl[y3fF_7 GyJ0(8\kge=]#Z+PpGlEn~^i4~4D㞩XUlosAj #Wۏ@԰LgD̓xm}/b.x{fDϷAы2piSLAKʆٙ,xN4beʉ ,!yG@)T$>(Q2A.L{K\"r[L?Ҽ*̛$s}3W:(=d/If?< RV:\R:6< h&_,䐻;TjoufIu97gXC>3>y~ *Õx+%"NxI+Zog?Woܷ^q̂;8cB`OZ:z{ek ك⚥s?xo>{!3g{^Z߼:ߖO@oP/^z՛|w{˧})mhȷ?G4?+ezxo_x/x8ӗ~X=_pq@7o_̼."2Inà.[|NvQ0P̞@M8 d65XD$qnbFA"z:2h;6_G߳e|t~(OrXg,yb@pu9i~Um%\;y7%X8;i_Yi+Ɵ[ &@(<$FV4Iv.7aFv+ԉԄ,1 L# x]"B,1A4,$⅋ʹ6IJb)* `d6:6m.)v R&duV4g(z mg _o2kHWf̈g]Yǀ Bo>F+]i29HwbEN WW<#FGS,KH5_NCOאMN%'ecgYgއ,Uϊ?Zm'KqC%%Ć] u5,QID;9V&B aˑ l\rn5EDt TW(۬F1ʕR42ۆ0׷O޽/>>Uҷׯˇ{JߖQ-zCPi(쌜ycXN+NcVkgҠvJ|/?Cc Yb B\,o0ٞT =_{\@ Ε1eKC74DeFq>wlEF_ U1m 6E]1%?ޟK:iKp:H ƴ|goC$\21;޶B96Q*nu8򡭏gnjP] ϡ_R5kyrczn٬vn_]iO۳їnn5p,w#mTlK>:8SpK LNik9ɮk&DXiNٗ#t`1@rT9%,lxc`SC4T3Ngbex\V,H7&{VŦQd!{DBG]7[{38r|L3iJr=)ڸ}UjMub Gnfh M-Km_(0$R@4㊑VqĶ5hmQvp5iY^&{gr*E\HIk${C K $#q5c,Z.SM#WR-H~?V *>B$a#N+$B0uz@pY5~|TXXfPFiaʧAXڹJH\][!yOit:m QpbF A4Q0# V%b7!]e#\Мb]9IU(l&a`>"k܎:n;(Z|s}D,!0$H[AK䀇g?J2u/cqn"dgrD|T-t+Ս;ܿgaZ!.|iϣs~ zP#Q,d3fnc,➑}<-xrrM"%K}p蕜OM"nԛp@?YآIm[ ٌԪ*iRKYI0-=XjBX,pndY; NeJԊ ]n\K@5(6͐Ooֆ+;"AC%{5kMd[Bk[mڍߕ!%w[7(]L88+@?{#Xd@$dE۪w |Aƅƛ _[5jdwB9签GP2Gf?S!߰1u̖{.ڄu눬 ~ua.l!2Ie5u`͛ ؅>i9"C#D" wR ׆$UD}f.׾=|4m\~FH3B7E7;;Ȱ,'^i|h6<ΗиTm;ʼniTsNT.CJd.'_H0d 1CٞqmOt0W•A!!HCn6q@-]+K] 8xZ64ܣB^\e4)u9:8Փ2qOwlqQES}rDIJ$Raf<~Iq5\=@{گrĂ6ŤICM,dIr84jګCSJ6d_OdZ_Ԑphiq4麏b5[\+=hJܯnz >kEåٝî%]sɞِ݉4jޖXS]/4B3J {<~*I5euQS$6Zm.~`Ƈcg-b~٫y78K l3vqkdy4|DdZGdՊ7RӄV amG~JkZR>t[p֧I5KzK!Q-cJwӢk-1n|IڢۯK |kҵ+%mfZ>?;!mF_=km, =:6o|S1af+,Ѱ{71저kvղ;jv:-i ~.ҒulQqtj8Th{,i:KhUw+-C̫5S>rJ@g`u A,0Qu=4mw*"w@4YInC[d$b֨KgMR@]kmFȘJnۈ⮉'ݻ6lvFshV[‘fqmSr=;=F͑w̶@dOv:U17ۋ hѪW`{̕SP>cLcXrnĽ."א_z ˑtIg7;{:`L͸'Sz'Tkr*ޫt0Fl⽉݆&l_7/QxFFUx{ 8**H"Ra%\l<ї;ݩ'$qq)3!XG}!F:x0}nDThf488Gre 1qMbܱG-`u"11.Js"9c GfޚQkS R]4E-Ԧ]jɔ/a ,E+%,_8`,<]¿WMۊַġ q;&\L*-;fPZˀb|ZG_rC)7S Td(q2MiC&=S4 $+[NC3~g~"^O֚otq|\:p7 1<[]T,|˲YTnbS*F5*k泾djQ^JIP{=4 qټ, jnm~Rcc 'X0l 8ЬK!MӱÙ*m񁘭Cr9_!q~2 _b[j kYB57,kJ9 ZͽKw۷rы-̀aurt;T -;E9oNy+H\qd!>%誟bl0mL EsvYY[&&8 C#;V^anYfz(i(MX[C'𷡣e@093ڒǮgm3 S$1uJ;shzEZv՗.F}VDCF.CǾJ`6EP sisR9#Rh,qEG;6 =4(ֺ "m|' ^FY ?rV(m";Xu|`#̏*2AH [&̴zi$V8h"҇B*6T6sSNٕ0{S25k >= Lj.ɘ v'ӥZF,˻h3pk^(kc[2ͯ$P'Rc[7pesviB{POG?p $նE#n5]F*5  iRMH]5j`m!4Ceǀ,rʣK A~&U(K y!en5fH+cRtq,4[,tn2KISa%bI\8_Y7_zb}`z+=ؒ _!@KZ^qî3 "BAq(Fm\M'mkNΛB]NLX H^eSs">lS|8%3}r;u;[xkTsZT)tAL3K ݮ| 4\zEL,fϤ k*3&[4 7/A@Px9p2]1N?me6GdEqݛ{5y 셆kĽͲTmCk97JK[rAFM6"n:UZA~ɉ7AwԵ*>=ՆfNYW\tt)\V*j j 8#"`hS %n`oSy^։䞧Sj7.'W6jUR2+PO೪#7Xp7j%*[[/rm0wLiݧu%=yKjBSY# ׊ ɸ u*Ւ`l/R;؉8.C:M8ɋBaߎi>ZBgknu_  pYP$amPOl"qf}O$;JfLr֫*] +j8 #ezxBet }*:2݀zu/rl/cm n""MPuKkS ͨfUX76K.Ͼ(dt¯q|F'mE,lݐDPtO>`{L46sSmʡ)FCVxUIi`ʉbίJ2L :XR2{G'(bBFug/FN~N8 B*jٿUi{q*kފ0^B)n ]Z&[D[Z#*g$Ye[lImC9sGEOjÀC0M=;La۶֮GԈi8pL>^9TR*o6! vczF oMg$vGZ!rǖ:U- I cArRitI}⎤R_Nըǭ?YΕ68>%JݔCi.ɶ<1'׾]v<ѰTG鑆pQISxmCV'tV85Ԉz9zf~(++G`H7df@wKSݫvmv&ԝPyZ |fWnvY7EF -i5 slT5q-2oṼCtn,l6A.d#E{u9CåoUֆ2L3;:@_7;P` cB͠g㄁y0h'Ve{W>*9mqݍApm[7oΘįۿ~Y!=džux,K7c{}utn7XC XvZ4М mgag510 OLm޾~T gr*]T)I#D "c]F|`+9x~H؁69tECs6ڜ㸒yAiOz۶h#&T) |k<4]2fa[aۗö/¶>BNι^-sПԪ_r5?ǝ=Ҽs$?IclC&I(?l֟۳ߟvp١utIyU(I)LM? )E|J4#^-mAZO"my^z-wUz;ҨWƮ2nOG8CmY'UWr3֜f?6 );%4 Dw'zt+rтL09/'u^Ql)zĞ,.=sSj'dR&iS S+OAǶPwM%}ØA\yR- R#f;r0p?וvqJ1-cgZGJ^bЇlǾ[PM{y·pϕ3oKЧ=UjTblI!Sd)imV~Xm9$;ôXS|.NH쾶MA)n7)}=sSC鷈y61UKкt'J픯M*瓍.BVZ܉>⼄^-+kk Rq94>k.h& 5ЉosC!5ǐ;>? J:^Gv͠O@֔Aתpt2X}j#C&5u`J {aGRaECV(1AR u! nlsݲ4 G:>Xb!qŇKd+Bo>+e|O9Vdi{ρ%A=FNd}׊[3n߿O>~_~ mXm,aش=}O~}|~',R˿w~x)WYᶟ.}O㧧? >)㗷t߼?|iZx<]O㛿yUCnvdL'Pug1^8kժXnvl $F/&1Av~W4[UYNV[R*ضHhZ ۆhQ_aWMJV2lj8'a8z|'Á|Iw^Eʊ} ܩ /F*’~{Y2".x>Ilz{6kmd,wSpG"IQ?B)H>i\' (NdwSzAx;=?uwӥC(B3q0Rk07Tu!/T=NqOj_nfD _lIp&m T4HT2[hRb@83B9΢ǭ6VĞ8.d֩;_|JӀ$OBRBIgOI'svӿΞ4v9^+UNYʞ-┛Duvc9+cN2⾰K9p6#N[Z[COBxY*`@`;%p+E UBt2_v6$vGVN',=Mr읱B9W pmͣUVqKp`bϦmȱOO8^,SY- MeftO곣h=qŻlPJ;%*I5ٲ,p#zLCڷJ6hے_pFoݏK!Psi!|.Eܓ:sX:aE'IcPUHb\ I+npxO=Wskj[KlEh[2c+sB]F7&M9* NjKnVGGYpkqT/ʄ9ח9[㖖=;>Q [dQ 'W̧E=^pihBC%]ko\Gr `nǰL+ md? Lxx)GR ,~ܑ8mяz˛Wl 9ɃGOGro2_=wo]/o~7W=}μo?_\X/o޽zϏ[ܾ:zx?]qzK{hl)OO?}?޿ ˟~zԩ޼y~zw4_^߼o}74ǿ~O/_߼ׯ^WϿZ|o_wׯ__yz_Oz|_r|Vmo>Kz.GoYώ!pRцz 7C1K`!CmRo0"7䣋G>O7Pm<;l7::ƐBC~eH> tzHI3|Cs79YVf G.`-ߒ.WSfX̓v|Xh|I/U2? G~ŸiHQquܻ6;kn-obGז^{Rs@)86Hٗu%Z`l\]zl^? z CSb3?6wَ]7zbTm2˄&n.rO7Tɐ^\?L t'QAEu|h7qP!7<)ADFaNvȇ1i춬 iQcH. fjgR6!y %1"F&ќE6loIAz֯VU\4Xl~[Lmo{!a}UTE"ɏI~as xH xCX M!ƪw{׈=0J,扒{|锒#qC ўNylpaM;䙬3}sK!I<%Y=1kuHUaRHR1fH=ǫӭ%"f[ !gQք)5/2$V>&ձu1-al!yH̡,403s6qU C70Z 4)&!ȳt"G?!?#[ؒ\1&ќB'%1%ݱ왒d k\bRK$* vnI4$ 7`[볩3f4VV;d&c8i`հ=Y|M]7I"ZȲ, >Omm%K|m1Π2#v{!^"lK6vOes4օbnAgnvp; & 7;vqoZ!$ֶ>L!C"{.kHk^XLvu82yl4輕UKy 8åC KsGX;-+lbb,Xov t*fYPbb,7i 7cA y)c aʞU2m7bCG7Ұp-@d:2: %BR`bd -03nsZ![rt,%$qxo n L4n%a.=$-oR6ȇ sDal3?I`/P@6_2 F4sN2Lʼ8 nD=,PCZcr&s~m[ GVVڃ^Xj: Y DC~@;f;a݃.0џo^zon&<}}{aiEx4F $3_7R59_ Y" Cc= ^8 3liQJ!09#ǓAW7]k6I9lݙ  ̓ ̌~ [TmR(8BjsҴ|gL!yCI6 f8*~ 9\JI}r7on7nT 凿>zɳ}tt6n Ӣak{c)NZSÔO~a^_?iE<çO|܄](uY]EL@`cC@MR4ND}e:72AhTZљ.…6Cʨ(2`Jr8jY»qùT*}} GגIJt$:,Hid[0?=S2gs,@'(z= 22 9a'Ohi'd#,fapD8`Vvv5s95VPN`bqw._o \R5 XIV%`FbRb:9$ΦN8UZ^~K2,=jiǍ$WqokF[D|/گ@6fXwGbLהD r>J$\` A>\EAQQ41g\dSveώe1SO$ۺN6"Tv9˦]ZQEZSHFr&l{AeB_ӈBސpe`-i\S -+;Xu:z&O9v8 6}"2mghj9C]^/q(x^:XŲs}7jwҌfzxA3 >#O|!{Q$K+RhMɈiQC—U.6cV "+Yx\& ë]UၲlBd C"kbޒ9K]*RaM-]٬E=eW5Z_2,@]M`YsA$.}okiJNMD\(,2%8s`$XtaD5ȥ1A5bm ikHRٸSd1HYY,f,'س] "RBUl0CʱD Nď#Ly'Jii6 ARF8,[ds_%VSءQs"H J=a6lozn[/n7Ve|&LT {pM&Ev5Y"v%)D]F:[23݄8_sk,[5$f0Cm>%)I$&Hrj@fH07笙**)s_G _HpkZ ;^̒Sؠ$ wcYdj3b*lX8Oi(t`;7z?N8'|G>]/Énj(h `ڋSNH3z}؃'fp&0q |juTp *2, =aڒ26< yz(-ˬ Ɏ)eE84(2Zu, ê5dS 8g!Ţ*aFVyY-G7%Q r+]3gAylQw $Uf ؖP ~`bņC;ԃhVjk!ppEַ"E8Ӂ(R @jGVKq<0.&. aK9_Z]PEMy˙Ju@M%ۜpԕᅊ9%s1r.Zry{{4'8 x[ȣ=FZ R`ipY(RS JI ltVdVd!QmEt*n[ynwkc}e;7&:j~З\t6v.r[vEPH.8>TTو-++- idio/~y<7l|$,kvr@HjRm{.V-^V[0łMAuz wj`Gxm'PBΖs\pZVqߥﱲBuelUmI+}g9zX+q5Itq`™hs */9ӣ%dORgNξƛF b$EVdϾđ]3g<0v>b>*kxG$$Ovi"mk: %ltSe\yh/g'C;ͺJ*jd[m_ CֶLXDnMzI1#/ |Ǻ| JMن2ޠ2RkmK&AMEYsZ1i SV+u{7Vtg8?WjQtMo ҄!ZiL+'SYjڶՈ6ڴf-Dv%bMsz7e'(Y4*3>bk* oZx ȦꢶUf Ԣ5'&n'3 ^\|}'_?T,n7xvQ^ h&7e;^2[Nޠz-,kQ>4pXVT1naeIGBM|KQYDe]ƟT"c-*봨afEGe-*9s5'*G ct}-,۶ڊ6z Ffr(缳J~]"VZ -gBj\ jM} .H)'u2C] GVGeK"{, xL"Aū&4ۏjk4[<WΖGrV G @:"\*guZl֫Z}l`qg փ:ĭU#|ǬqV->WͶnoA~{ںaS@&/ rWfAZOs@EҪj,kjhYؗh%>shbp+-n<)K+{xw~z_|7|9pk4Β$m8kfi%Bvd` ՘%h +_3d*JhGxeT=xDGAt-`瀏TaX`e:y.5CA#{ X3&q|i_ kc0Jء5VP / ;q\.JtW0M4bTh(-C%"y a|I<><솤f%ppL)&Kj] f]݆909a.=B8MZ6*]\Qb\uXj3eDcHp a[u{C+pV5v%lZn ɱUm@Zg j])б-XgwєҶف , kd' 86-) _" R8Gů%"{ >Lf3/-eېʒmYwY@h=NW6Q^'Ica>h3 0}$S!)d}BFNWid0*kQER u:(bζ&t{ΡT1.3G-7ϖ3<$*,>I8W-ZH򙴖Sv4H /-g hrsR'67BC$][~S4j޻!YV IJ-+GA'ȫda%$i{7뜑Kݿ9(AM'e9 )ߨG:XIW;oY7xuԥ/9ޠIzC 4 !Nc:(I_ uU !^OR)oS !NLEp:=x!}ĿO ˅7NGoH7feC'N7cuӋ:m$C/eH'!ŧitQ#T}veU mB_ .(my-#2HztCh %hlH']B >Pk;qt!n7'9{=M-3}K%=3p"3|#G/\~ݣgO4}zSu>_/_>}q7~~sϿ篎 oqpӻ7A=7y?{q}篟N믞O_>_~{ezջG/^.Eo_zŷoχW_}:|7Er,yu+v~%hd.BX/c2g>?LfKe)D1Tn/&RHҎs}8_87z$S'ihwgg=vUuH=,4e:P ڀ/ ׇiy~\e+UiH$l $«kj`*%/eMf %2}v.w` M&͗>^ UglR5RSBcI܌'gHBYgiؾ>+vH E/ op 4]glz 㙃 yj%V-;p+҄d-d!@O9d I/IMGp)}op~tjꪺP+?bit j͊E4 = pf+T:@3̂N :0LTaHA2TJ2QIN˓|aUS2^IcHxݮ)ilM-gd $l7􍼹܀rsbDus$=NFpZ%zv7I<=f۪5,ԺNWG/JqS)閙\/4R  J 颧Y:!t5`5|a3!E-eZ6 ?ئ^(MXw"qlvjn?`8 zeeg;uRubJGiZ(z d=?]?i&ޯNC!qM ͱЦA/ G3?7ƃ.z2gs,Ҷ-[c6z[AkCtCޤf|2&=+aMH#<$S.M;8g+ty_N`\tw|])7?.g]x8?QNybroW\߼݇+g}|H_^m?\ݞ}G-EQ)#SS)0vsRBe)#1 bX*VYѢ4z0]70XI2f؄W·-R'@CV5J= +dk19JȒBC ۦRB"ӊMj6HH4'B#642@97rWlhhX![ǖX*ƉS!Wа/,lqWHaNIY.cD`(ODYF;X`"ARrpg _:JNw-;X6߭n4S`l[E'uįo@rL QE94QlO H̗7c C<:`iC-wXZ\KfR esp>2 Ol,GPb5/6qЍ,Pӈ %Gk]$IMm76y&vɉkH[a4"@Ȩp]HA!!m*PO\F+]mAz|dUPxiF "1Ipy6'& IN DUBi(UOnAK?JpԮ<* r`4NY!-0e.T0Wfˀb1Gn_$Yٽ eHrkM:`*!BV̲fg5(xqu@Ь*ZRЮEO:VԂda*)YE܀%h)aQg)X8!  Ip/ ^/m0<7m,0fE:yݐΐbyD6LV%7T2͋f %\U4ɰYJfdahD I7,1BḬ/\Uk2m\Z@@M^40p!NB W#_%_X,=|$ oڌh5bF3[BN<* * 0(zZhdq@ ]06Z  6L2.sJ)}(J[%miLO,6J%Q'h'ǣp:eL'^平ĺI^4;k81svIBtQdpdaϛuÚhxF)GS O$kY~137<;<65"8S"I;1 $8H;Bedm'3K0ڟ3 )12UB |B#&ŬBf;K:P볿d}XcD jɹK}纩AOWNHjej>Y KLw㰄g/^G󺼷4 M&t ezb`OmI2\Z#9^jk;:lY7 A?[[$4HͲf]kMhs- s+O%RSFo:іMhW:VВ$=F$b5yt%1DiU油E%wЊ9/,CA-kZ&9t(tNԧ6 RhNw(qKWMRuzvu)|0]bgv\ґyM@g,aȋД$|cw0v7(KzUJ !]>;÷:mک&3I$DuKYb3TYtքǥѩBO[LĒ 8` vǶF5uSzg3g\ss}! {4҂$TTP@|D=sӅ~ږ~VGg3蠒>xla[ɦgǟ.^x=ƿyb-DMx y7o㿜ֳx3}l7|z6&]iR(W#~E7TI dDls . eb6/WpQp}3-6@:pVVtQ`AmkByl}rbA5UCWӀk _].NePK])46$,rU>wu@ 5@ -E'ZI_.|s}BR 7!&$5vx ^G2;(cp.ϗHTTnN֩vD *¾Xߴ@nj/(@ RGhNOW-*cWRH>i5K<@qD02 ;uU.UuA%]Ѓ,2gMg0柁 Fke:e䑂f{M[5Nf܁*h$Z7dOL{@+Q] "m[.\F1 ('1*Kֿ1"|C jvIJsB_uJW/h7r]pMCorhAk K,H톅4 '$ki=.|%@d"\℁xYc a^MPAs=֨?.3a(E80 MBN3IXAZO8_Y"I!T5uDmX ":T憓@ŵ3ڽ>sj3#]SF:o좒mo(1;Qp@Bys8WJB`hS(W^@ l.9^K ǁ7e(lX-St1jB=~jd fHV&XUwFXn5DxIvΛF\o:"hV[eE`Ky&?# GtFIq{(>l~i-Q <+{&M!Oq'i?߼y[P?_@^^63z|q JC?F7dx-{nM`mQàMBThRnzAkwݢ,ogr'Ѓvq,G *6abu ,mVz?*WN4ȰI^vYsYPIԖ W~x|gbյ'j3MjkoRoѼ5yX <ԕ- e+'ٖFֻDNKѻ <^gN0K^0od !4ܪ -K^K4'knʍtmf:mTPzj"ZiT ҶWd"G6'QcOP=.,U D㧤+8|m^J:| d>=ULs`* ^ٚ=$.)jKs&yIJs͚?DBSKǦ3ve9.= =Zq?#7g 1ao2miBI/CTIî4/x$w93˰raHO&ؖWV =zmX7#NS~\:_nZ[2A͹i9+H7ݬԮs~(# ޭ-sϹ]~}>\9seSc29r|ֱ Vbҵ+DVK^ӍgK"7EΨ+DX3zoZOZqNCI /Y*:Զ9skuӍ ҂t'z6kTG:tw<q|)f:T7CL8-W_ل]ԫǗCR\nM{-I\ӒDIR;u)zGvt_vhQwM)$h6C2)JT!=՜vR 1͜iݥq]g;T{YYT+Cr)ly}HTÊxd]Α;LC{NRi}drc]LN |d5WϴC=eCi&tim}sQvƹfo{AS&jkrouDնﮦjIpB՞5^t[I|YTTTڼܽn뻟ki)R](kx\ۼ!k3/]xwˇljT(~8a#DK(7zt.!\h+KS(}g2j2>鸅a !,0X>XKAS/kGe=uo]n wM*h k+'Us{4Ttd}W7,9+jDן+q܀qw(x+09etpWͱ\1Htw'&]M fwN/૵Ow,l3/d6$R 9(~`,3/BQmQl^}h BLm6ǜL´ESe,'>j,9X׮&w=Wy`wh!&pOS1~:?NM SK$LkT$Ԗ羈1(U)= UK/L`ոN5 9f\=qA0uŏ wFtYr 'K ?AuMj%]dQg9 ҌM6ӥ)' %K+)],zu@cHCU22490jb| )*^( TiedElV5$FsʂS4U65Z^+k<<*cLmA< u BDJxzt随UIN!GQ~ [ݺmF,4NTBP_*5m3v3]ަfM Àk-EC@PƖ>{"q7EnR XcTͯ jaUKK4it.+PӦ1+R5^u ]de0鰢Z+ v3Mq/ȗ*I44PdJv/EpR}*'Et$t&~K"Ss >#kÅȹ >6hXA_ jG/|Ջ>z(h`>6<ڼaF1(*{HF'* qE IN9npfx-zG\6S *.J>1T>K\ɡ5xRItJ}~*^fٍcmp4"۫F1m!{$gtbqC `J<)S?cmEբķ}A`%NEgpQ }Fg(ʅ &I85ZItR+jnJ%CR |eY"߄k |G4;Eg &0b0BEm$YVw)UlK#kztz+} bn(vQǸc*-v,sTp3ʥ\ *gm<8ώ9?7~3\l- VPerC0<:ͪ>Q' ) )$-A&8NVNX0.jRzՑ t(ݠefѠVCϻ ;&x9CeTy@ sYv[]0f+̐ _T&> S8ۧWI\"M"a' ̎V+&!ϯM DOuštb\ɬrto<6U&R+(<ĦY\.? ˫_UJ@87uPC(x) Zr9]~ 蘢0_%:Dns5Nqk,j\6(1vz heFzLPdAA~% dEP$VEAbR0N3g{ L H!T'x۰f͕H!/m:Ia&RS"aԛ"8%\3x>`4Jq@^Qm/A9t^ hp56vW ca_FUȡN>xD/niLq|f`EmaؤNFZ2X^ᰡiD"j1l(mNpx`Px$^Xe H)\`XTHl0i;,RV\!X(~2 uf;EEk[j4I\*'-05Em.L@?ۊ8;/Kc) v]ذ-St/L&PW@Z}bw:BCT2L\,d:Il "HHXg7JDjIR :Cm#A×9\"Ȳ"\YAB:~Lp6.jWX!ZN"D \Fa[ZRi* U~B!+.Xa!V?HRC^eǽP$S偺&U9šBCh*}iovg(HQ5 0Lvu#WmWu``~|S[8OQRrKp饖j7 ]jz"}zwyzT^rhv?Ay$/~o7ח\zsw᧯=?{}y?^A͇Won_ywwxQ>ͯ4˝_8_m}Pɬ^p{|7o^y{wEwW7o.iw7WoLqsmz]^Cs=}yy{oӯ^]{^nUCal I*|u]4 {_q+$Qh7U.ayͶehI#a+b [+7w+)̴vh,&Ԗ Lb*zLpoNzԞ]S8Exŷ,u؎OYYyQ^7 |<3ȠV;j:IhC,aTXb=PX2ns3J1% GlG ;4< ǬQ `!Vk0ˁc㙮Pr7":c"(ԎUћ& Q3 Sa|@Uu&H"aQxѧgI8 2`ZD !G.D#&FQ3.IB8:P pxgPgX$*Sh [‚q`̄]aa@zи0A4)Zف@dpPDQEa}pCфOiez!jMlht1=q`1eanc#t"/pL Opk[5Æ DTCAXN9*G;H)v/JOC v}}p̠Ÿ<08 VXM>4(Lmet/usBʍQU9Av\0X5I >FS tڌ?S|%{ m(r@X S-%|>_|pV8B W5cixPB#-W B sHsl` (%qAM7Oܽ1%';?„ƒ-LӋ/~旻(o%Hs0 6AE*5 ^_)==QJ'&/Ava!M(A<+Hx%/雧rrՁ6_+~KzG &-3%AcTº1m@ɖO&Ib!22OlK5SmL4g&76$j_rJSE6L,u85\*㢵c'=EW <IP ͋λ<(k&Z-')-W ]Bwll4ih*2 XnXMSW|nF$|QUKPM.KEA%HB2feToT^9Gnת}ofB$-3c3UdBK Ū˯emu:T;No+̕" vgp ͩsb]')Ʊ:V%ĥii][شʧ7FWia%hh'Ҭ*E p_KYfV$sVV\fgX"[;teJ5 dҞ #9MVMn7l$1%$K .Ƶ'*:xe+_< Z/dp@eu-͸2m7Pgː,Gaq7w40gt' " Ex2\[{lS 6&_aE0=4UqxdL36W|ӌeR eIq}/囉*V]]Qָ4vB$ڑ,ADNӠ=Ҹܭ&TM\b&X+ӨI<ҖJ|1SY* ѕBP3b\Udܣ;te+*i\d]Ίz@ :"Rb&E%a`Bw꘰jzv+ f$y-/1%Eتr$i)N. y)Nh(B1X*-V~Е(G%c2{V"xfƧ1R1iz굎=6]V鋶)6`ǢUy#C2#8ڊh#tz&iI2rK56Г]qJ**zJfC :e暥ҽʽO֪EƸXu6 31Hdنgz"7"L26c:=A mwL2fhZ.w\bF`6ƛV$V+0Mb/T(b'S ʡc嘱:BթܤӦNU%9ue03;8Ml㋐q$2YZ̝:w\UZjl{@i41MubY16%DiC}8a1 $x$s$[U٩ QpQ@f[ 1F$΅X ͧd{ 710TQyClsҨҤ9[tnTR -p}`dm{ ?7'AlQQQmTRک6E "d;z㝨 T3) FF]Hn qL^ddX5 *BSt>jcʈxlLNR?br΂QBU͕`D Hlmm (\ d}Ak|ؼdX}"|I9.`lO"iz9% k)aWYjy*k0MsV@qY7~'†N2grrGʅ1ٲu~W1< aX'_llvR _S q(Vu2B#m)7;V1eJ#/69LTr 8v쀱h8`N`ll L^6}X81H2:IF WYlE<=_t=>' t k.!s w#vcz|K?_]绷w]ݼz}{q'QL'qfr?w 6L9H_41)Kޫ&0\-DM#Sc3[~K_]aW2r%OܼrR E i!ּ0n\xրMueXRBNn6:Qi~"uj[(6R[Vm1m64A;[!%$N_rxEaE@o & Iғ7Գ*}N.0eCej_/+MaXG4yՆmFZVV}i~ƈRCqxv2Ɯb 'ٖ'VRa7Լ;AUhm^h+G620&mڪ: D҂LW 2RMX[u=sF_w4#}Ԗ: =2m^l׹C7ҼL*tlsDؐIiO<% R1cF%aن"&c,vl]c9E+]N6dV+,^p21& ;1!uAsQzu_G 5%\b'D7F{.V)6Ka J 'CJ3^uH]ȑof4iqs#8IiCT;`вli< r'xxQJܳ 9-׈XSUs@"V5[oZRȡ_Vi<񤟖$`A7C0Xi5Os* 2(تOaP[- *8MuJoE7ZGR`f :wza0*Çj[ @ +r*\)CWuenB3ZqgsD BHw%bFW+k6Ŕ%vpRbŗoҢdFo1WfL985Vt*)Ue #ܫi&Jx-KXq˹ɂfi/e? s}, `5kXԛ nű8 7)$?r};Q@ ()FRdCF{9.N搆!hM>9mN0 ,Gͣj+ 9\tQıE@+ꊶVsЎMPW*x#7=YFBrn8JN#ߜpSPpn<4=\az XąطH}iƂLnc͛ 7څCG;7]?YkqP? Z+Iەe*֩kv947G8Jnl_oemXb~Ӛ[q uaoPQM6_ӷ7>T6eK\jC a~lW.Lk12Ȯc?̣5AfZ~қKR5IF YɭG%4/mxiF"zM[Vf,: ikKagi#TJñwS׸@ ߇ơn~0{~aaQ 7 9P@~ہ@sK٭2mNg}gT~D9//8=9ԡfZ x?/o_΁׷nG Z 5^ puĸFzoh蹁`xN0'ڱT&n c-|l.Hjڇ_3E d9 PRz#d2EnQu`2B_<9'X0JtJ,l{L-!wMU;Idi nS{v^.{KgYܳGî*4|g}pҭYel~4؁U=e,O<ճD ҈z>C,.Əx^!$`${nV:W!V1g|Ћl 66[V#AaΣ)4ǠOZ.k2ks3~5hֳX GT֘ %}ҒZPڟ07"U)̑B0 'vضpv)pNih;CݓFzb{|%詆77?ؾ sj;afcG$X"n1 %4:#AeP;Zn*hA<5vI_QnJڿ)mS^,4A'-HEdX a-0aMy C=TnqB^^m׼@Zqg56t)=driu5[njo8ș\u[5i಴J<X;?Jlc>igM,ZTơ;;50]}:E-Li]}y)-Ym46XT2$g8p{.zi`ٳw<#ft}Kܥ4K]ϼEAm.Rr0r|f"x?LTEFJ,$)",`|vr'N8)"]nɄ`W)S ~Jt&dEpՙK**,*;$nͷ1+æBxE 2t58DYN%<\2H~:*v*5GcPl&12 DU42Q*/6]/! .SFC \"BO$9N-r8g/}RfZnw _,`r.9eNd^Vp|2.n|,|C0h4S0A? :I)ZYHӧ5Mkb4]0}q0I,_wΰ m@92cAM^"wO2;d ,#} wڋO|QP2DZ\A Vޱ-?'q=rғCݰrLZ~rU w*#3V *&cL;_dS9|Y|9h,6˅/6SɶE8fEjfd='Pɦ(Z>nYɂĚ$jczbJ^%`-SNoq&RgI: E`Ri'"6ŒdDZ S+OhzmIKFb[Yć_1in2Tɒ& Wѳ!{T' H{?bcKXɺTaʙzyZ(ܴJ <'[! ʴ,ml'#a XÀw!#9S/O0pA(˳٥ѝ<))CCȥ@ܔoXYu YW-k){#^yd/t`Z r> A!jU=3-%V.u PAΉU 6 X\ޯw=zw۶˝MR/` P)WZ̔b2N` {i&OֵiڬNٶ⼍UO7g9)T&΄}?V 9t+cG4vڲIB6ELltjR*1HebbD 2waz6 btd:E sl0rvݥnN쯉թݶ )bMX9Ljs{]۶+VTjqIIDr5?fS{La'}01tkvv#vÌo hLyW-#}g9à ]x =5W^"^M$A\3=&_rX.mO41W%7z5E"ř@JV>s 0wG>|1j=a.n)=%"ɦ׌72@ašdS}{%Lw} EzI"ƥX+<|̋S\*ilMs#g=BifIOVRMem[pҨfj]ŧhYblzpw> jƵXM'O3'Mi}vy4_?Zo?_]绷w]ݼz}{?鲅;J|X"|nk/HJ=}ISRV[fFF&;+ӱH-n3 ;~4VI69h[ h`m*vHcEV,Flx9Мnk3>cf;gzaKnU:Z/ e۵'`jAPTJuUUJM cdlnF;hMZHJU$uGNycf1ٕmq sblۿqQk:V1 'ɁVq&&-exñ?zITe9 VUjmڀ=:`۳6Mf&WIja7r:&:ܥGus107VsS*tГC}BC2}Y\DZ3pR (Z%2G#-%oƒkʊӢ;c7g%/"R͞$o}չ_Gc}vl=| ni}dt!_m:#~h ltǓM^ޜ{^'Cx =_ :pf sR:FKdR[]<ϫYaΡ! lqMaZڵnҶ)O`UuH%؅n<|u68i_npvDPn'uiop. v`TtA.7l{4kTi=EEِz}筼r={Z8[I])R k꾑32jI!8$ -SS6ᢧ4ҧFi!"TdɈYs+fȯ<XHR Z@ցG!똣 a)ȈB#ni*, t׿ҥcpi, s-vW-t%((gs_æaWUגdI𡭒76: F]oU"2"Y[\BT2[7:5 ф 7Ԛ E6Q*denHl%8!bP;uYA^"m&O4V(z}ybē1g~EQ`۔-X um6zL:ָF2ny lQlRՍhM(PvK"U; CeOm6/<J`arTVmk/7<2tN>z''O?Jg|~O^ܿ~_޾~_~x7{sg߾zz~|Yo_}7?={q3>?|l}Ëo~~?O_|~߿͛W9+w޼~|ϛ/?=ѯ߼{ݷ_޿?~o_{xg/>QW_|ww?'OgOzg;?/4}}}B2L2hT6nFs$چc]LFj*a ٦4 `Q!ID:jgEOu@L.EӶ lsi8ox(X21sCVQtX!^mU;yܧ˃llyBSYL:1 yg}CfLi^3ko@)&cI0 6`$ x:MD_kWDL + I[vc gTGVPT&cd@ L=/)I}] t R{B@ ^7jX[K_۸#: _`Rqˠa{n욎Nh6E1,{kUu8 râ%rf?d;dLfxD &EQɂYY2zq'e̤;e0A ,t7aTAhpEnl\D6^PâRwI3 Ḷ˺EQж3F⴬ Ae !(d9j`DY/kjuL~P$`#_vM>4ؐZd¬͋jBV\xl}&GcsF-CY X:>ۇ75o0U*VHbFWqA▄NTӰe醓zA` %G ţȩV(א F#ނjL$v+F0 5;bu8}+s-2#eD ƙp98H E!'wFdh]]TKx#ގ_vka'.RW`f2 a6P}dY}C7z2H k+3V1>ҜŵMRJb.)|vLx1V2H3:s2Z<bc|IĻAPw C;.oȮ e; FtH[r(X2WPX;h' pBq9N@%(X"+~2 7FԘ l,iHh N$__@yf vB=^3FGn.O6)h%.&z($RazFƐ,RA N3>om}ڣ Ca ?X]g_?yC`WY}cCï)UM1}>l޳hWBjOA' h-YF*u'!En H`˪B$"1CĠTglZVފ ncʺ/`,Ql(6F߶-4&8҆h2w( jQeR4~Kk$0k}Dn<%Ȍ$+Vg՜K\[t\G CZl "+,*$8{.UsB8W LIZWXQDi2 &j`dJ1?yqNj unE8]:Z=/G&Vm[`( PL"zH\q͈EwTTGDK9ǒÐCiP13GeJ7@$+j$oYY\Y]Kb%Y:}YҼ-ŘT9Uq8+hy aQHSR`GǼi[dj)\ZXPXt(6Zd8gJ+ދLIY1XK| D.PV /KrmyDR.de$pQ [A3\ cTn,&.̫Qme+DDהG+ Ge9h%Řsg:Zɑ8\Kd"@f)Uqq6)){HIjrKe麦_bUKC&c916,)ՓH|sPSuEb`tTc IVP#"GA 4JnC]$*B+Պq>H5 )ou8,Qm:: =!{ܿs+–_dK~P'j~ y"HKm6ǒ8R]ސYT4 G`ՒαJw4y'-[CK찖 dqYs  7aUI-CZg[RThc<+TuFhHzq!ȥU-mv,*ʴV s!$dOK#J\ TcEUVp\01Y2,\XY ($ZrQ$SQ!},ԡ`bfRyS+6ܒUT Hu%sˍ8&`7Tfk+32#Kb;mQO8#1zu-PP>jLGΩh,4J3djs=Qc!!H y…t3TVD pZ߃hI$ž/GZ+bADlHJBe~[鱤$ND{إn`c" vU䇘$TP_B:}7EydsDzS T[L }DF5oEH|~=[I&X{5ΑC-q!\jJCe/ gI*<L9 9wVޛ|go>GuC WqºiJ3͙@ƿcwiP1#j&tsRkwGG㐳-8P.ݑ~s0PgхJ^qTnz|>ӣ珞t>>CYy7/Պ} >oIo6k!2Z`ڇ᳧OO5TzrqUdZPrLl*c$dgHsMePuN:8 yFux2c~ɻLj1 m<~*Q| Zbxa,ᔢteQe홄FklpX;S";l[aƃy`a/`3=>pBGzf,u!9>{nlwj}PL╾`3{71!<6զO!!QJK]B]bsVW!(00J.y d'y.O[TPKXYبq1lYkCj N,X^X7TYm=>y\4Ht T]E=mg tb`N6hXPhwa@caGIbdY%o{T}`'ކ-SA Z)„"!8=e %XPF-XNSnO! zIe =Sǁآ֨4ޚiU'B~@ԅ8c揝`y.yߢAhIipD@¡&GVH L6Q(,7#)G*ۖ4nG =!FJB'ePx)T/tUZPuB{,{ݫC#mxlCTB%Ik{1 XYiGmPuiLżuYXml!H^ۨ0'x"eH]gr|1 VDk\„. pVTd4__n͊bBگR&F x`UUy ~ us);ܰbw &E/!e}EbmP.!VkP\04k_#[Q`@z7qI|Y*b1/8T MB9 RҾj\U%cPYx"ΐ횾.9gI;|V[b "Tw(a"a0ɂe?xHZGYZ ˂z;#WvLA#"6Y14vha^eHUG R'Ȃ”Vfls 3s]񋹳-2H D9y`yS 5x1FpV//S.Ǫiy; ĥЗtlN5Jp7 _ya,2củd䀪m7b'/?yN_O篧//>}4_ >vK bBy w6 J/.{*bE'r_vU܈d)~V$bؑ`"T9b !J'7ap;6@yFE#"A ].aLhmﳀ<v GZ՗C15숈}E ?:`&l~B #uHS^3( }!{!2R ed7̂n/p`:*K|4KM!.Lbk-,h P P$$s <g v aX%`mCy4SXl`ؘJNq75i L!+E\kixo܃zH-'XYʣ| Qb>;Nn!RL#A99D˅V\Юh"LܧUߊ ,d"cFk&T*fMK1 xG`9g@coxm0p pW,zYP*^v͆J4STIfG`KEy`RχnAf䦙#GL:q;9]Ln*pwGgfaLD?7fgJƛK)\6]as ys+772PlчY-">bru'PraEv;R!cw; !um4)DER(!sa Ax c]kSBN[xAGLejAʜF5Dvdȅ@X6tZ 뼊;QZS::.0w|ˆ)kZĠv9p~U\\hvJ֖oZlϾz'/˿~37xN'Sx\!_g'58>Iƌu趦/i-5& Aڲl0qUjhTx3"lMP+㾙0ikd7\PoFYhe\׌a _7ܶ0aqsUūqQꍻQcv8lێ%6v?c$7U@J'[7In3 >5+×c"uaf{S,ϖhEղni1<ʢ5:q(mgof`5uƟyLm3{sMŻM,Ԛ݀~sTjS>MclK-;;6g}Sxm5xQX8MGwW|B^j䣌̗  ^_ބyoǵS:Ur {F 5^<؜HYw``g>mƟ3[BM޻uqߴMH_Oܔ^Z7,S&!NRt;a`P7 e2@Q .Ru#M7񌁆*٪f&0iHwԆ݉n뢸х?Ѿ ^TCCɰ^]l6^7m(f|ETgR>FMnYR::5v7I.ܒ^YjY V5q{G[&m,ftfMT79MH%h4gr7ѓG`>!w߽ϟ?oh!?UXۄ WMcR/2Iip[C%1EC:٪ m3WifnFw/u-չB麮mD VqBwv ' Iy.}kҰ{5"޲c!xCf&utn dyF-]l+dL?Ft2xn|[h ftPgE78s/>1@5o3΂7[LD4l0\~Ι`lI7Ɍ+2u;yD=1HV0 x/-#0G] ` PstGxe<5I ay%ös/f؁1F)WU=D1 ct&NRFvc'l򾫐eMgiE |/,MmMu9hUX ڋ-cXېUR&YD2`Rˀ9p!F(GS͌$ tiQ.ѿ}$isZY/8mk6Iy?@039a1u4T&^S6^x$5_qczq$OVxFڣ)n9uH6b 9{@R vvG9;9e4;LEƴ5JNڅG'uv"݌3/Y*:za)Rp\> zߴ.RVdkj|']0IՇdbgWISGuڧ(]IuNDwTKyi%nڍ$]7It&P`CXá IҌ ~?#FIc{%awU eRT~&߇HIxm M%J'Ju nAuhnW2w*ƶ[GC #c .NH\X4;lūLhM-gکLڋ{EPi7V E%hIC;-OK/Ms^wهŎ$I`G6]SeP #d7cG~%e.v4&]mW4Ƹ7U NVhK "G v U>Vֻ2 ;.#};sm>,;o 1G;ډ=2aŬO*}(v_ ]-9Mg`k&vȆr~ܜF)1fD|T &&2>Q"a5xULQ)J%HҞ$^i44~/B;dH$ Bљ3cٻKaZ|3ƄWLfʝ"Iu_IZ)K$4e\Yڂ tn3Կ.nKHI]v*:w_`C\%j#jouҥpڇ= 9_"cVeo.w=]OZ3KHiDBFҞtF+R@;-2vL W4 ox@i!,l@7QGW U&>%`ƕgPWꭜ/|+  vxW cqWځA1xIOug9R y̛{ ;0<.pI|q vՀٛ.tj?"G%RoNҎayd`dFv ( dTۈU1Di>ٸ(͐Tt/vJ}/w|2ylh\K R=6?Exx'$3t5(OX鶳_\|8տ;` ,9> _4{Þ5c~j6Z MIk\QU+\i@,g]f Wpa3|wWjZjzqQ@{4k\!}Me& 5! + >y\͵]5`qbo]iq4#*&ɴ5IzH{J:lxiL ĬwZ] zt$&!ĕٚN:"_`<"::ug=)47q%թSs:tWl{BO.SxxiJP{; ?As7KYը-`Azh\fJa=Eu=2zV;U$WlWJ~&cv*e71l(.Zl+8L݉J7O;ԥa7߼b]W)k]I?1\-i"HoHlh*ѭm 45Q뙠Nng7>'Ԙ Pj;Uu0i)w8;'I&x &W>i*vI;Yj(;IqFd/揁eng=HSa5vJ>' @ j QZj[y)դksAH .8Yc8qʶ淪+ _Tx@*:9=omi(c =y*X+`1^˯OGxdZ&ZgAڟ kez#"HtZ53os{t!Fkypu;{`"<|8dpM,0=IgSBG\8EQ3qzKٚ5g]N^xG)G1i zNZ+3rd *駤Tm˷28rN{Le Tۢo"]AHk%уN,f vvp%Z j`{_dNF.AƲLƯTcGjh1{=fGhv|n+?ankplLuȗ!*& CLL0l92oO^gV<:xTisnq\9!aWY&L]_aXkc}v#( i zn98{N;(E.;0AFJUF)IB'zDA:%:i:ͶE0(!n[3$EɒP O#"Ysn3)QVhBCg/}[G3?8E=sYni7ƴ%{l$`,?YrE2pPUyKj9=[wógwr'_ٳIgʟU:;`yIZ:\~ş󻋷gek+لٜ"W 9OCq;?wZ O2g+y*?W",5L=oK/Ɯo MBWKVy\t2O058N:2JaWI'q8ʓI.6Krx#gKL'zyœS*D^M )!+6#4Qa}#d RFXh2 $V>*-3pHRb9B)׸60Jf4BffO1ؕ46_%L&Q yr !+HxNyB/TN(ȓ@HFñ0p>|DyN <mVvI\{Ymddq˞ʸU~O$!kUiEg0G_,EhlTȁ5퀜\ 2*ҕi3)(|" +U(? ?O(pc->o`:I0H|dBi~=,roz*y$W޷*/F:2PShͬj;%><"Vyb*{ Iؐsw~°)KF1=) Yvj2=Js EI52.?6bĜ6ľ)| N$@Vf|,_yƒȿ/N:dpRx D~[y՟/pXl"Ѐ"X咡}IYS;U"Eڅ=2'G:įj-!0@Ƣ[WC= b`ڠ o V*8D*"יݭA&b1DѪt$h%9U%3Qx.DªH5"!ؘwxgVM8n3 dAym,W(I_1+¬_r;۪1P%V3Ϩ*XݢW@|ͣǾn U8ڡ)ZiIVL+)9Tq /hc Uc A^4Sc8$(\1ofb#C[^a LDz3*z5 7p6~FmΕP4Z?/޼|TZzpz77}o~,KoՇwo>o>oO㫷o޼xӇ߾||՛?_}|6Tv&){ݯ>z/>>x|o.?{_:o~8??;}t %aLfgVEg%6b526RrW_76#${&B1\#f3Ͱ թn j Ub X8Ǫ:z5\\K;}C{ Kho@+ ,FŶ)=,# s>jBI9Vq=+` v8/$+%It{06c`HFo ^?mivg;"3k_z8RY fōUGm\K^`7Y%a1yԵfvVawn^<(R#^\ͳqy{Q淣47Нx-6h"~QU+.hjg|ѰfxEvJ >^u.%fq4x&C$"Lł6yxF X$P]JCW~[3".'HF=XLvnSABD9W,[-~^ݜlc&ډԻ=b猩LV隴,AyIhG*!-.km+nl44 7HhٖD#hVvVېJS~z I], RM7lTR22<}#EU\tRv.𴣗zXZ>fk.,I-T[ t*9$7ZL!#jekc9= f#λ0;=bda{ #zݰJ;~ݞw\>]qݞ4=)fكId $Ƹj >QoJ jTc"eMfdT6ӔDKkb0T׾c OTHǎ ]Z6VA!\cs8QA8Ks|p m.2: 4>9|ʰI8z5Rap?x 9,ƻ Dwn`J͖{͂vwyztQrBˎEmP$o5_+{/rӖߋnH(nSjoW:ͯ{-8{G`HJ\fbǫҌ N35j#,rQSd*T!K\E)V:HƃE[,X!Fp K^mJkk:3Vu .`QH& `0zLm]Q] ʍ p~ryJbp]5ISrr^=xUܸz$TҺIuW[`1w}?[Wa[D5̈uYG7S*A+PlljjqR<#;fOm:X)-\bGh"E &:;#˃چMj~?ϤL ϭPJ1UY1[[BJ쐣XզR\lulܟQs ekJm1 ڧNaiA%M.yy!%(8yR7$Z١jUuWhM))iڔRtHڗTZw)9J/P,>+; )c|nFcOVU(h?6ʹ\\g"1(|ӄդuS2R.%5's6q!H! \rMjLKu[eCR5Tc\uzRMIW.TPޢU\[Inm1*buq0%~p㺄Z(I$V?+:LhǠxUDrieͪj>X d:ƕ)` {!.Ѐ۞VH os8®~ʋpؠDX#>A)-qSs܆8_hdqXn&H}$&O5Z]&ȳvB^0J?0A eL*,lI4APF s[<Ҹ 7Y֊;E6s);KIaRc;rʣ+,[$o pdv]v"Е^uY"+:c"6Ɤ }: W:>X>uc4wXPG?cը%9dɝl]Q,֔@( :Up"$<*_ jI;imlNO[yq}-°֫ M_1 u =lB]r ca/ڈ˞ 1>>* v4fA啚;H8w;rH­s0 r q|]` (b<" t*76;gİ)Gxn{CQ˒vr hyns ;T_s/ 4\;;u{}N20fXӝGi+*ISTWã)~ރx%ޥd]@Z&7ޥʵ w`x[ox2nֱaԃP1wuJsEڑ- CR-cC\F%5x}eUvio=Dc&2Nt|/500Q})pxZ_Uw#;Q\C2lr#F:YIԲeL6)qn-<1S׏?#xŸ;2cػuw` zU3T.]lŐѯcr[Frl06j뜠ƨz!^7?.D`:܃-m׈08d{XW[p? .IWwu}^Wc :ڴ#RRs)~yZP2!޼~qGI'Q`3~Fn/J\%hFߺo+/o@d++6;E$]_`_:Qٔ_纲1Ò X4f:Ͱ\E5?vXݫ(i#%c )+u&b\B᫹1(#)4 '"]! duVI.T*M"N<,VK+R+U or@HH{aTPPc+-XXC$]3̥H@A4-kd=2o7)M*hPz'%LPTcLGW/VaC0]kKьkASM&}Rnn>ǥI-.,H)R725&;?ۤC 砇a,xÐC+WZ^C%V^"XFB]txnΡ9 ;"^~1 Z5LIۋ0L*j/֨bƣ5&̘F~Jc)ȤXF)yTwOX* J^[4$ ѷ(Qf+$ԧ-*XK!o#QE%ʄDv6LKְ ]b6[zjɔ,fO#~r$zdd"C7] *M~'1:]Xv.$ND,-%0g\s^$cy>X+4I}d';MpLD^1\2! I;4D]zKrlufnWD ywHF0<'9;u"BR>n7ي6\\R52>$~EWPK[o@ӤLkZiT/*M~Ž$ ʯԇ:NJ}K. Ta?ܶXָ'T,;/̴1ߔzK[w# % SҘ'6hk>qEH(광qͼXBp}i0)(}ɜn Z1*/k<څPHE6PB/7.!YI0H]vL lFRʄ%ZS zMs 7Y\e Pp~62f}n/&/< Pwy7LmnSiI4]Q8DlfM TvgML lCgCE)cƒЮΜ0i$ThJkpJ=Tԛb҄\*[ bMRݘ@9(r=!(N^A tBCq5$aw-l T="Ԇ?unZ꽖ZDoMj֑߄B gl"ޖ9dBF|i3?cz obXH&[^>Ⴄ&G m˘΋Hu3y٪0(Mشܶzn>QP$qGbr>, A,KL#nk)g5_%rۊUW9S2+[{y>IShWd g? !}se* 8к礤ejTNl Q!*BMqVDp;~zϊï-. jv3H;1Yҥvu Ԥ;7EYE:N[J[xjՔն*_ F39i:q_MnmT`k6⾟ aj BցK^ V Z>f" +#2L F\1rx)XSdC;k:AiJr},ƙ#Q5Jkdք[+1,k5aVd{^}Ss?0 JB$'& wy=ͣeȻpg?~n~~~O)s}%+d#;t e ;e dpmtO2.]Z`YA"QT)a5/Z$zSh>VMhM",߂X句S&x Κb*7)ЖlsKPխ6Ԩtŕ۩0SW:Jj'}T~6 oG--5x*] l[ ,9;1أK""m* O KUC%Mah-B@Ui+F ۝[U\pNғ@ CwE|1X -Z%\A鬦1m(a11f]{E`;uAa#%,N[;zdksjC$tu,b슽ڴU~[=,^SRW$c3c0"n6xF q״4$']dY2K_W 4"e2<]ߪ*)9/##r`K*"r?~|[sb/sw !=nzï ӟBCG-]]}Stf<1ˎMyb %a80?~E6]敥&JF{MT^hua3'_./.lPO kҵ*gl|O*?T>j0qEО_gxbN5 nnony p@-}F uRk7Z%l5*/k Lzt9|^# 9 M:Ə2*O-"M봲6>U.¤-:)H} 6]7f=̱Ϸtfxb,y>u9e]sL\&=,|~QzK;mNYoe˫`\w4-|4->,4G6[.]6 R˵}|H*JHz40}t)d$ łbMje,)JwgFQ1tj8X ѭ"%ҵ9hgOukw~5SspᅛtU } @YXV,h 1% | %jY[B (~g_ȸ;.౧5| U3{ؒF!H>I \x yZhLLn^BäqOJvҤx ORT:]Ϡ$ˁ8=%-sA"?t$q<^E[- h YςKjY ]MӬHlO&~?7#z'yh^%^QY803:ae#&ͭ^glUT\/lZM27LgYL3D13I4}'鮮 ^bI؜[t:颹5p OgOT4{wQL>}s-:.u,\Dŀ8fii5HhRg:*\eG2-/cr ;zQHE&j(9pY yI01 Z0L\[-hZ~w,GӒG]34+}5ĞSd7Y^ APӦ2L_Jf!K݁-K(:?EcU&PML5#f^.>cXN9le5xJ1T&ߠ{-MK^ Qn8`4s~lߐqu㯡 x5ظ"iV!T?́}O7o^>2ݲN//.]/]^}+>=̗ϾZ_~xx^7zsz7o?ܦ޾{͇Wo^Շޜipyb?3˻ׯou:O7p4!_M_>Z݇G/..׋˯?,{~<׋^˿\<_~7_vƜNmy&cb:|O|k2 A![D̠\f & *5&=TV!]C6q9p Wik^Q$:1֝wÉpDclO2;Os[ۢS2wp2~KHߖ u $E >s1妰uV-3Zw" 1J龍 k3>DeU sܢ08 eq^:`˒ѥ <=(v(mC$>aC(~0p|pɩN{E ^i s3l++)4W R; !DDc۷ulȸeP3Kg]uƀw/r\Vv²ygl`ZE%k?U !Cբ"،&C1\3d! J!QrN&>X" qTTlc1 y6qjUa|opQ{߂0+ⰘG;}N]` Gǯ^CJUDtk'mEN&+eNJWfN$8%!${ILNK3XBOBFM^.z\bYAa e#hJ޸wSeh\D3.gKd,~sc/4/uI}#`UW`;Tq?*˟6H'YEtМeLQ[Š;PL6uv<8;xiؒJ/-au7 KvOQ-am}; &MwpD{2\NLiɲeq-l]kpTb-#0-\jHk(Z̚ڀBTe֍#E#&?1h}JM\]ѾMA`[FƝ/+gV4Vk:%-H`\]f9ϧAixH"eSLRx,oOckc5B |7BMUqaL4!3L̹p*3.22cNƘ|UB&v{͇ yyOQ+ce(R(Fxˇwvӏw˿<֟nzuxx@Sz_n@4i|2l~!| W@ ;f`o4΄i^K}6^Ib/ XT)z05Yǖ3}[M}q 3.#ʕ P Ufk‘zѰ2mAQ命`8s9b7&΀QQaT.8m$q@v_M<,gv(/;x-Wbe _&g͵1@LutNNQMS;[^~x[C 楉WstkBwMtƹk|`RhKd_ǠŜm˕=J\#QLȷmwMT` )ǮWsW9eS)DXG:d$]5!9 wS `\ApJ[ٮt#Jp#%L+Ѡ>" ɟDO`viyӣO\eF؍G=_tsVMׯ'ޛJpόA>9Bյ)^hmxhj@$SqVB/` Iь?À9 j$̖a;Ή } AT{ꤸn}&R|IۮwSM%۫UZF SuPrͳMqঀ)c}TV8J)S@ʚY"ͮ$ⰶه^oOl wb`SwAzm;h]w6GۇM 9&@ ֊t6RЄ)j٤RC@T+S3V|BjZ[|W790UQN. ;L9;$UD[-K#rq83ŔhN6-A0[ DcP:[Gȉ~k8ApƨzhFJo7+7[0} *ȰAq*-q&{4VD1}92/=:6)C,0Y4g9Uc}ycֿռL$7Hi GޚƕϢ)t2 f^\UR\&Cvf b3zK[T]fM]AԄּRA赈Db2JbfB\Ԃ=Ļw\<穘7n Qs..5SpmA(}i cPrFNTHgA_8.*`-rLiB%'Ŕ4,)zVG+hSA0&v1Zîx T%DS7`-5Tes;`LrG0@k.~ys<ʟc*cp *ʫ?X5Vbª8aUKqtvVA"PԆi6H$^6士! b(_/~7˿d (WFY! a!(_w~6=n`?5(4`O+sM3GAKEe二ĺ8_I[g|r\ ӏ;cbvV"ߙa>v+L?8V,ϴ!a $~ָ0]H 1r$IinWc51~K3]*@.ue[?Axn:kULϿ yLd:6LVJ1 T*t!I}A866QG[/dyHҜPӼH0M"Ю;&]vzQXJ;\B.$i7)gw98:6qvVCك5)}Cv.Tk Q*eb 4s$0a!z3\E\Dm^0 M1¡BTAjC&pge׶k,+ZfH"e[d{~=yjp e4?cD9~*׵ŵ1ytǏxut-9\d ds ?c76$ b"՗$˹֛e@J"ԥV}r%@p S5s s!WKOݩ} }☨1^#]H]>X2@=3{0/>>M{>Sn?*l˱kjlҢ*aӥGhK0d {AZxw_̡dfv@!,AMKXJpKmB R'D螻ap+clR>L "?0/GAt,B^7vhk1kmY>uTHٱ舝bKٟ O`b_`u)uy$,ŞX[4[oIs \z`G*{ȜTE1'T>2XGCqD 8"M#\1P:Yb5q͒,')H @JDAf(5%pScHPɚE4TQz>?͵}j@twXd5jO^T $9?~Tr-*Na]~qhoLy*f`wNFi0CNtN\׀*{hρ* 9:‘͂*]%Wp$ؾn'oJo ӫa0UQL_;30꣓2_L*. lq gU!?ezQft9$pvGjZs8&n`Tpg2Egx ;S4ð9JZu(YO"A3l`6EzNb/E联6 VhXt:VUhR>9npZVP e+ʿO#c24ʯ#9?-0\򁀰*W?O2INrw VfU 2P]6_EVi$)ԝ+G (#|@ 2Q{?&AƝŔQMQ(*o)?,SPan#hslO&? *F tfU=Д(l!AI%mf}=u$Tx46^ƒ"64TmWگF^ڮzKSZx qp;CS "TU;hCg;{w0XMä,vf7m1VGW[ՌzN[t{g5{Ac O>a@iulˉaPzOAi'%7}am)7΁l9(K_yYV8w$oޕd;jη`DG)'8oPU6Ѳa۞ۚV|,ʈ9Ug.b #mb4dD;Q.j\ߞӍu"EIoX*stƩ&-S whE&bFEnDbO5#!R䁰G'KW S&S"߳B';3L2?bdC phퟨ& ʕlYfyx"3y1L1{P@9:}H|>z1Iijr׏<}B1Wr9et^3$xѦ`6t5A`PQ,6q#Tb;U8368o?ۚ$b? _ NR$[ݑCUW?`raиz`݊ӶKZa<+i]4n$ce'5ᦢcUc\\2ih|vvۀ3p_i}FV"qqaS7А`9-6yWARNiKn[0?1 vV+íRujPNj1}yFO}^]=N`{=_d#֪#ְ~U[Q䱌FA$` Gsuzӣ:K-|ao;-˯i/ǻkCe~\}ߖa&^|>>:<}\ZUGE/i)74WuYJflUa}}珲nշs>d+V3&Šj&г΍RKTT9DDg)|{9A4YB1Vk7c{*|j0ڛ0@g7 r jI5fZ6O ˆ聟Shx9LA>:btEQqCCD10iMD]T'h]9OҘk<ڞ7''n` $Owil"m,S:vnYv$JF]< `yN XQ-or7UיCW|w0FTsHIg/BPۦ .vkfY97~ˆ!&1F°pŚ8R+ҽ5(A+e^#|u6UCsftQdlcKTv6k;Pg9duuΫK.)~#+1LSF|ۀ*7&Wz5YdXvIg[u]-7F4JSG,ĴcƤf˧΃[ۇ¶"gR8NG=z9CNs5$t/\3&3¸7hXP@t* CЊ; cu*3V*]\@F("͞CzފA޺]!c&޿s= b0_F9a8#9Tp}U,u%.%Lқbl0RuE@T 8ot>!Gz;mхq]a ckVrˏ'[\3 gYًK6SU+`vpJX.8_k,#sZ63EX Fb8\Ug`Z˹%1%HLAO'sFb-9xNQTwOL: ki( u8x85m-/W9 ]l` z1&{gD:-90GY0oX^z*ϰ>Nw`g@iqq˛sŝ~;zθ_iԔ埞__<1N?<3`i:.x]wt˿߽݇W/o_g+}留e-NsCBGc—i<͓[Z )ێ5{};)&,4fDRpg0K#z-'XIBMѬh8~8@<&1+ۮB *K/1@IX2h}ˋF jh5^2(x>~XR5J"?6,HǦPބԊbpr@}e B[S.SNl,B4!'᥋:,wm.a4o`(s^!$(\/(Ԩ\F+? Go73Bhc䠴G:mZyw'sg$-ܹ<{z-wp_b*ͨ>_6"v6" 6'gSW-lM\͊T !%EcIU%Q%b0AQ"gm9C@(QcDp Θ;E(H8JFAQ;\,*Aog} %5ν &kWΌZZ)9AA~bF,Ƈ{EfZ`z=[WiE5n2 qlBjB>5!qG m\ISy2*>RV!%0 &kDĪ u%b92nFsH >M?-q%fqaȓCTFdf\"2>bsk3'^ds*@Jf&{\y+3XƨT`$Nvey=6P f/[5 ^<}^L.X?!CZqldYC?f^(KP3 cL ց:Lsjkyt~'z9qbzn+t:,/\·ꔳ%ivSb'KSr3d@J.spUg*FsbGڦ%:!N2+1>w6(&1T2_`Le57YCMiZHQ !9Zj)8֐P57Rjre:\3A7a]8:-)@KOȍ&J[P`=ȎJf;գ5MzfӠdr 5YJC!jYjzH]Uþ?u,z.q #J:4d,r8f2'gȮhjiE%ގ0;SŌR#ODa2±+{WY:wciI$OGy-}3LT? L5%s/s4>zdk՟Tky/%90(3WLu –ei-zu x1'BC)][s~S|8cˮbdYqUl+67WfbVɔ*1@c!$yx8\u7܋/>Nzz&Q4G.q0ɽR|pGe DA9|A5<><[t8[ QMG!Çt?hcl7)ѻpe׫>Hod~׋4" #G)S C7. 0n!ݠ*" 3`g:IXڅ0e ]aβ.sv0x?,76Hʓ92q" eڇY(\&,x^a|$&/*5RL9L)7/6x:?gJ?݇o~?/~0w?\㿻 ~͇p!-D|=!sy/oݯwW.6_^z/??﷗w_}wys{.>7?xm㷯߽~˿_ϯ |}}W-UE%>-XAZ* l ^łJJ#!@ R: 38:)ڱga6[Rhޕ`̳D0КrO7|8-a2npp_^ = Ehi T&C1|j({ខALVJy샀7 1׎BF{Dḽ GF}f,rT4Xt-R`23h([L_4؎x27eX&*:;:: zl1v̔$xB&J F!p0g /ι,Rt=^N7b ǘȝv2~ A78q.dG`J#PDX$@e!A7 >7dZCZ!6ʯxKo:zڪ$(r@ !9C69::0"`k?N0hga#T2.d` KJI!5s40B|Wa)7X9v<, NyR\zVN)J}߽M?eg&ğru+~>|uj> .ΟxyŸw߿ߋ_oo>om䳃 6!ŅRlZ.MޡIH .^DũPFX4+43 $B,qbt4ceQ-QLxhlaPˌh(`{)BO $jJy|Srڴ1mf&;~mv 9L({d>w.0|? 2c/3 ?Ȍ|0ՙ /MP9e|DRQ EfvGV HKx/`l2TddQ5~!%>qԹ@2fic}GOa%|`d2\_VH<䄖_2fE7D~J#Rİ2"fF` 5b&`ɒ]i; BJ<]J$R2^ԔAً4K(&l9xE7 %0ʴ1wT+ˍ $_įpĨѫPۜ,)itL8)G5yٖ cR64ǵY޳` Bix*q3 JJ-* a$2u 7 6E(\ЂzfyvE*dͥ ~܂y9t:EB*q AVm`4q֥J^}Ti''qc?j^@SS]>E!uvkSyNuyԐu;efJ[bVDSxNXgw[O4@#3VD% L|_ bU^; hmVi _&ᦼFhM[ԫYCXޭ:IT:f瑲&'gp'Ly8Ǘ;'0pl024{Rژu櫘d?JA9xc7).13 ,٬HR%wB:buG*;<';|j$ IR M-i:#j|OfU)bK۷ *0C:AЎ*-zkrSoU4XYI-qRH}" Y -eS#CQ#CwT1L.jgE--7tl*ǜU6 1V 2{c'S; E+hAŢ*7!aBVB>%\Y* 1r G/?=q& cݷtZu$5[zȓZCѾ?Jw`V;Qde]WnjZTMS mY,ҮαZb+B hM?[ -u\6iZ/ha4'i=^2f[<׬c6X4H>ȇ֝M`@6=͢Iy$ӑ6n3DZ /^ #‰[` *bJ0dl Giu6D?t$:}DVU+\σ7]_q[1 5zjV ^\YMo]ZPI+1̦>ݷ:Iݎ2w8&-~o]ˋ>"Sָs^ѫA_YԒ<*|;]%Hh*N[Sai5ԙuU!\*r&AͻUwSv]G`mT_R&՚`WJ'<KWǙs/`6#5CR(ԦՆ64+j֛$ <ُ*-#,>X>z4YWV&}zZIUf 6aDii1AdgO0a9V.HCy9Zöȥ~-nkե~wsI [=$9b~sE~u{ۓjuVz-I&ZrI4[NDT]Il8)iXކn>:iBh%2 l6T^TNfT{TUEO׹J%$&%{1&̔4AƦΌiՌOaUn%uF^s ?hL!6p̧5LY:8bҽØG4#CAM>vT_Ĉ)16![yXpKf򲋙jan纇<OBՙ֕g?|b7/j+8(JmP` Yh 7FdqRVj;>DmrFi1w8WW3媴@:Y J zo!=7VAZ8 ăq_@' hH>k*gm$R'I[IN# I,th EkJD7 zDr4tLm:Ջ)L}Hv#Q k6UVn:ed0-gt8t":1JL9 <`(a|]Bgڟ S:C#Mbm$,CTF%9h%* akQ>%rg;ojʚ%f V%J@[Ԝ# TDMxZuL d:̱KhGئ$*7-rFrPQG0FA9m$!HhUxM5o{.e~:MC:l&֚njFR:u88 잧>wg)U䃞m[F:cL2FNdkN[@iop|0FT1'cp^B2DUL-m 0|%8}5j-(ܖфLNQJEi&15Ҟ7hcugk ezUbv3)|$q; n 6rߧT/ $ !t^FH%(|i^,",*3l3ˡ@Z6ZJ:h@n uP#:Lirk|V.dH^[g$&nG8͛aSTŒL܋,3;5VH&:T:tء#%XDMfHsZN%r$ò.p'gzsP=96g _܎=>oV3ՅvMWf z'*m]bྀ3uի$Zh0v+r]ʷ5Pк_ |(#?Ǚ0B^8{Eq_ J_{ Ц Kxq7= c˕^l|윿,Gc⸨WV T|U) #rpk~"I0S8[<_d3,f8>e:%PN V="ۇwU8"ܘۍI" qk` c͢<ՇqP0 1/pk6YҕSɉgz`BZ;X$R3΀dQOVLFȡ`r{k >`H=k b1:3Ӄ.٨s'fUݿJB:;V5`>1XKG!%4:R:[pz3eF 3}w!S]N1D=S?>mo`9 ']0IJCK.=E[3;xMF|wne:':FmWq%KyX'fR ej˒zdKbʜIC+mͲ&kqxI4C}iy7G{2b'#'Wl#G&3pGLjOD,mOd;b˸9tM:^"xa>؆k؞pn`4'r z6yV9j@6ENzVrK`c9L;ˤtX~I^~Yk^=:l g hz xhXb47,aqn o6ڒy{G {:>J胣#g3L;˒ÿ :RI0c>2Rr'lb~fd!&=0VSΏR6[A'z^L愐(:T݈. v#NeK!g< XGg >2j'|+6}=q<1wq9N/?] A#+OAŭ,hڣPaCtzlkJ4F\Q)zR#e"%f05R]W7/W Z>?$Dɏ11)ĢĈ`SγE2' aRRI3 ^mQٛ3VC,zR/NEf-X *[i63VK3+/5K/w%M{uwc{ nu2 8 "1u[.}Y\#AE5$Fvd @*Eg B5l2e\R[Eu=Rn ?D${{b]hE;jb,@ӺYz=<=>ܰᢇ */&0hh{fd1d?c2' ̾L4e=*$G:q0FԠL D)`}Ai'ۃ'eI32hY"|AYY@iBKXγ %{<(iEI8s+BQS="ؔx۳Hd=Ƿ;",56ZϤks16f8$ŔՏ ܌\cͲ-N2Λ\`޼FEb"xccp*$ڧѴ~'^=+DMxJ>n^~PhvJ^>.'^rʲ X|\3'@^}$/GqbTBC)]Yo7~SrU8QtI?tqˁN#~,:,DUq9w._%;1_gֿjSSvƎBѿ6, ?%?Xe┓RDq;/aGut=Xy|˪<pc be+8|maQ` @a~3pز!3Ba.d~?ep^T6:1ߖOdr4ƀ?lXuA8PA19I)"A7#'(`+ 4K^=>,PS$:ha,),ǀՑhTij%5'> C)5;>L4cLL:zݍLWpTc`GCayh&փ~fqrEg,%AJ][gA$l~<=Cr\ܔa4Ib=L;k"lU.vn,|P9W|_}揫On?//\|4o^dvwnn~z7/>{{+oIw͋/?)އ1/W_ۻoW/?W޽{_ǻǏ7ooooyOv)?yEq_iO}}/?W?_o/g0'~Ab'iL_Vzj/>I 99̐B'C5+[$AG-q_9-guYaZ\ G9+I/M)0fN1(~G ^ 0/O;V'4±!{&pdTw2fT΁qX$K"fa6$&BpU&jVG!9jc+tP'kDq3 vNe[kLrRc {jGxγxI`+!)PC'3[׭Q+蠐"7_vg,)tb$`#Q!gyo`jd!?E I89Of{MDdEJSO@p$?i< m牐vVixwFxt$&Gd Pda&SE|,$8cM8d8&4(&&cDla"D#b/>ns<쇟xuBauqLL11g׈ؿ8pur"7˗O )ǿ\ݛow^}>^؏/ba嬜╊'%8v3 `qEʨ%" =2"WG /RUO^J`8n":ojz!33`3qƱ<΂yא(~V´-.[Gj]ϧz{=aϫOCJZ$֦a&|+') 8M2@w]'hr"zŐgu %e^U&"`'1:a06[W VkE𙇊0 h-P$ '2BayԲ+ !J1֯^嚼{::?zLG$ԂVQoii@îxnm -`Y{Mbh4:=hQw@`ra,zm8ȓd0 ʁJIY8s^%r#Lc,a ~+\4nJAj)Ns1E Xܡx;̮Xba ú%qa[~T.?һ4|[ɟ@Ql;&(p d8F& ިGO|d[5Z -:0ă!m͎JE`: . @ݐ@Ļ;Zd ~ 6 R9{[}ڣ3P-,`T2t6IdKԙl4_I =)dFO0[R mpG6|GJn; S쨁ː3PqE#bZ=ZE7͠tdIv0 ‘ ˨\OtNcbĔ GrThI޽3F{i$G%Вǜ)]a֚$N:g!0,۾e  *ұi-z=ЎƀJJ϶䧲rۂj5`@ %2^[=Y=N nqvg5:x5*l爩ޡO{<1aa`P{vqazvJ1.,cn3 ;q.MiG݄T:R+B&o8owEsݘ޹-Z`DJu*d÷O官͉qzڶ'k᳀L.>nq(ho|P>hmZp!ݛX̱3:"{_>0a[gO [) D?Y@%!}"V^+),% T@.:|nW[`VWGE 'ͦU)bc@ GA&Djք4@@< a#P>sp8dkacTxLڑmWlƱPkYّ+5Raj[Jx6sւ`ŁqПAZbdgG/UKwK~aݳb01 V-H1J#paXcVL WpOXM^3VP0-,Tm\OMSf--U"sPkb ,V-g"~OPJyxr1vR.UB:t^ya#7SV[M}p,Rm$ f-Qʲf /~me8cc)E+JoD 3rhoF)lGP}/L qG(M*lдV \I!F+཰jefig kkzwaܗQ"cem`kcOzZ%M=Ɓ[_!)D="T\8XvȰie^{&hV1:XrZ=HB|ɍm1*c_\vh`mϐod/k)@lÒ1`]3CG 3v0nh՜i T+Ě=+ 'PR\]xyc*htF d٢l 5$O+ls Xh:hh-C9hgB#e+B%,ZlQiŶX7٢`6i$'O%q-9[6u3HbFR-Ȫ@m{9GP*_| {M j D;[M6ŌcFh!.hvGZ.d!ӐAO@=NxMÖْU^2OWbCB8HS]^j҂>KPY 6hsjljzƄQx+> @ -33=q R-Ϥx@CBT}t M8/Yٕl۫۸6JC~ 69q>5XF(XwFP# T&2Aŵtˬ\a)u`xPؚ *Nbsl:8Fٿ*9px=ڄ`xIJTZ/ kSL{K/\%,u\[לݭ/b@ŮƆ*b  %\}3/?8V<b+pC7O߆m%)$%u&P@,fk VMNyB?^{F@+48¨qZ#1`eZZWaEL xQzeHTz![2];Uڛ6z*^;/~[ɜ3@0}eqv0̔ҏ*Η`S!R f4Ⱥ0Pz6>rH2)X8L|cy=t01q0 d!+ds|j4ߗ^YY',\^Vo #YZ['1h2u ;l`N.'yU@5$TI@.~l2c|L!qm+L`ѧ.rI-֏[Pb T% ^d>rBb"RJ?oF:]iȴ'I{u3h6-xa XW6h^KO oߝNto ͛"wPvܝ:/JRj7M SUJ۴jmKU -8O\5u:jPv &x7K )ZaO(-0`dV RCFt3E8t_=קu2y #Fhގd*C sË2nA59&kQIwѱ+Ύ֬ [H ^P Z\S :vdž=kPy-G K7ԝTw|j&CC1?@DWqI)uRв:E#8G-VirN{VvRU'٫{ulrZz)M,kPAH^|=q$593u|A)שF㘶%{%v(BrZ(V0Q [.ͦ?ۭ`/͖ ݋m1"r 3HHٜՂ]_h9eOfK,2LUpNƖWfm l%݅{A/7y:0E Iԃ+uz G+KgO|ۈAt=AI{e=Ц-|ǗZ)xlf'e38=Xz(6o(_`Q#wZROhȟ0) L^ҙA);?^zuIcjE]k:˻NqvGm}ہ_P1(IowעXf v#{$yDY;Z6qwe\;Mb3d0. 5(-KlR#27Q ;~Ʊ R0TE(X&]4I=ٸO.GI>h{ڣ%^3YWJ'Qr//(/]>%9y ef?*TAb}N*:BbJF8wچ̌ԿѦԂJ4 qoݮԮʮ4SߩJEуtyk+S+Fei4g$.<R0 T.饙qa\ܼ1֘!W>8HF="g/nTbHl>ƽ\j]wΘʼn3%po l‹ռ7_?oOasGH5ӆ~wןXDirYBc0^xAd Jܺ-4{ZR`cA`q3*ŀC15NU&M*ZChvss )yֻ3fdz7hlQƄ=rX3.`]A^^u@k*9)=$*+҅ҩW$evJ}#Tiw0UzS:Xk"2<JJ L$7ɭd(e6ipDBFu_U03 !j/[j#- &:)$$ydR4 ƨ[cU_䗮ZO(ruۃ_5P#ab5`0\g!0j#,"射4eb՛jVT/f$cxw҈N'JH̉9mݤ)7 :-P3BNHդ{!U2'GLgos_&Ӟ$KZ_KA:"pCX^%ωMW0Fqf5­FdLXDկ&bby)ZMm`AJsĬQ('VO$R?Gju|Hp)MrC1@?&#H 2,E~dݡK3 .y'eSvI{Bi66nd`R > AWIQD=_uͨ22~ a_ *6, 3A]`97R60h99x1 CII ôg2_WJ{h3Zs7KD;S0̉,vg8kFF/?U8yW΄_?q6!\x \?|nGĚJDrR2]S /PNe NcB*]L5Y͕CM76jK'L1M)%%P~[jK@,; ,x9{쒸PJ(CRQf )-j0*=YVgf0`Pv@e8 MF-$ k muCVQ?Cu Y+b "3_7Lr53nk\Ts>z0g ޠ?˼C*LrAB<۱ eGTk7L^Mv,bL)?| Ҽ1 \QCB+B/eb_L #m#kfe=eaJ K,IL NQ0B[AK\YG L*z<ؤI1h.J95#nmuʈԍJHI]^BzW>!P}?mRCnorP`ZStOҏ[9)P=е"f{p2 l9Ls#Mu*p\l3O"J/Yv)+CA2h\FQuOٯEB|0ԃ:܎̂؄Rr)> e=5#CYF7o4$~Ĵ+) ڪzDb:Fg1I9+c]0@ MT1*0ySTtϱx1)$Sp fAIj?B308hv2+BʌU՞6k VP!!\zE"BlWci$Έ6bDHj|n<"3t:!b9u+JK%Z;8ӢX]뷈Iɛ5%j.WϢd,6b=gǜA{wfvsvkY݁L/?)yΙ6UjauwEq?,SR]S%ziB"M%^Mq gTqdP\1r\˄x_ C+`=GD8FE NA{ RټlA *m ̭qZwhGM\j`] m)IN6)ԜQ0`т~ћ͔dqI 'Pת!crkΟ̖L$m(XV(%3K+X  |GVr5ϑ+te ,4vU> KvTܸ!j?d2XFEͥ-eǼʦ)ZZ,yoseo/rFzmU%1 ʞRJrE(jNS2E, j%MH>x4M,e. w$66+2dv-d*IOW;n+DO-UPPHt=( J7#Bߴ"R!v JMҜiEQ+"cG\\k}r[MoV8Wg.3*yH*hh SY10=沵8".͐Uz$"{fyAHXӝnD ]$ ޔЌ+8AK4黜ZCݝԓVMs>j) Cn.upㄊLGkRP "fl@RX&n%)! <\U@#'SsLIy|m>h !`"!`A"WsC Qe5bD擵anHݑIN5J%n1`ڂv0:l-UͿ\}Nf3NsT6}x:\=co8 \o~n ,RMse颾&K{t*%pJ9GQ{dnZ0rIlũR5"-|^MbtSy!1jF*$O5wE--Ѯ!2/)\6|wRg{)ϧf)BN)U,{TU!SkS59%HA'cOFd<)x| m|2 FIIZо Mp }AK:t>\//!]\O:…v_HWEѧ!>( |h7 *I!jxHI~ўP^<1HJ6J5<2蓇yJ|}2uVm?)?/ -]|IzfmT#E.OdқDX t4Q5m"Ki*fЎ#]W18JB:`w+[67gDr}P1 o l2mO*Z:+T#'ʅ-?BZ63e3B,y]cXS`F=ٖY$X V2o7֢eA\/5f`= 4ldhyflfH7rE+bAig=MifEvecR򪿐BÇ6Q ?A#y#q t]e K,=['*‡ uy̱5lt/E5}o"-C>bI*9Y͗K*AN>F,Q`N˴Tm@P9=uvz iU3MD_)`T_h+Ord#xRdQ}jªa*4(Vo2,U0[d>CO ,3U.s*А9_44{ƅa6-o PiKP\<5UT\7Mq0U]Յ?!mLC'ڼYFGtKTK< ̫G핖}g"-=oon|/zzƼ~^J?ܾ{{{eٻo~OC{a|ne4/ODJ':=݇ww˯_~ͿnnyÛn^_|Nyw{7e*^|1I?_~&>L~_绫}umǣ/ӿN_<}?N/qzϧ_^_"e/^}b ˘K.2s4$Tr Ui8GuFq5S`8]5;tl0/2ydзweXQtA<6ÉedT[? x:g~H/CN \XݩFNȗ;_(G}eYPC(f#= r%UV@5~AyƾΒuKh⎼uN Bb>-ohjsȶ (heq8ЁN ';\[+9ɣ}^aеmDfX=Fq) Uq˻eYvPUG.ށc4yІ*I\X'88_,y2@Zem\^Mǜx6c&%ĉx..PW`G!\ DߒiB%)CKOc墉b@3*,O'a 's y`Ce[h8@cG,U-˻OZ"}0Ps$j8bVg>~5Aw˰R&f e4$;mVLϲp ZɃfÚ2ڤX6%& ؑ3%ֳ+a6T <`a9Ȋu4IϹiidT!V0VTzK,>%r4EPŐUY0!c)1J;E#G 6˺ LGށa9t0`aѿ<*-?^EV¤.)"Z<[ ,7$yC4`"ͬ?B`'tHPU_ u Jkr90y?JAb `nNJU_U/kHj0;ቆ)PhnFZ^,uIR}Cv-[)9LDIe; tFIf*6fg"i;p3=8d;l-@9T,X:}XY@lW]y9*e4e~GEhPsR0nDƑdQl4-D(6- +2 &p6j-j ׉cR;{x]U% 虪='{È-h^C$7cPua`AME>xlj6IFa&%9B!,x?<~`xLo,jܺqr?C |NR3fK*t4gÍ۲!)ט)ljE<'pu 'NJXFP\n?: l|M&%]c7A5*fX`s܌Ԑ AЉZʨ%Cҹ\s@mh c0@v[ YL:XAqC Z0j_(`w ?-S;:2pP,rhOc:RD5oj<3"Zqꚛ & {J'ȶEѲPt8,QA sSwqP'VNe' ]}cJ䌁Q-:mi/h[t9 Xsvgkakuls9<*0zN~ nvfeTYyD3MdB @ UF Rbpm&(2iaz@hզ'Wz|U>v ffs#B^тoftə؉XjGy o9-m5bĮ ZKO&ef ̦|ؕq.ګI#=D;35h:=ԒJs`UOCvW;q#4u9T֡u{NX1G:uhDy%9 BH`A͌c{URl37{xM|W !X5Y ntRAHm ha>'Cq@n5k.@UH7Pj%j ڲ:DS`H[́G\Ӈܒ&@ WI:`ܝ/{!D*VJyTJlYr'fa)2;>&ԮH˜U0כ8i>RU+ä}?(F$yºTZDĄ,{^W{(+_bƙ_UvI՚CUz! 8DhH_ 0FmO1Qq^wPH4z6f.ц+̒D[r$J(f98J3@)'Q_e3^*撚ƓBC0cKb/+{-;ZAF"W0  "7_2ODk )UEs  W!k#qTv8WqIst]fƃ dǶ-9n Ro:arZ~S]VgҴ7G%Ac"4l2!б[d" KUf̵ ϒj\hw;iOyJ 3=h+]/QSG[CB :\rPgwo)(q_p0fkŴ LhArĊB0uښ :;(xɅf>45:ݢn{Z_ 0C΀sk]2W^mvFH|bsBQbv%t~u->TqK~O]q8 ,}ovF~pg@ -0br޲+Tf1Y-wEsZI:b I!\W!ϵKyK]s&,\./3UV;u 5-#;- BINgmrC|pMDI 3U#=q吸]n\ąjf85$XUU J2k /[IX v^۶8ռl.rCsVTPWEP2kD C NP{ LDyt2[_?q:-@VaD&nYm!Q*(F\a:mN+=o3k C$;zӑ6b#f껱3m# g v FoUg̒Yj)ƴVsRB[HK,[êtQXe1IW; S0\ez]XE 42BmR3 jUX5U%t&(bАx,2ӹ'BD}gRvzcY: 5/x}'*|Jz]ea.U.쏹~x͇w~orٛBeJ.7i'ȯ ~m4v&tҶQgQ1-'vR8ܰirW7u6 6m쇜H#'Z!t"6aBd0L@&'ruS":FGm ZUn) g&a͛Yc #볈 F=&3EvU&J=2rYZ?g8vO2YoK黵IΜEbȨǍ~j(~LS ) `iNs<ӇEU\hrFhhUk{eڧL?D7?nsf5$T$>`5G!bWl3QCL~$r#o^Zρ/"[Sq>6i.("H5[c/rpx&"r}tXg@R>x}.:PRq+=@M,im{~=s u 2QۏZB%C@6nwVFQtB yt jH;[M<~,%Z^."r8stCfu&q99F6oo=PB6B̢uIUhuh,Q Xe1z/۵ʝ–rqvœ@;jۃ~v<70'k&Y3V^IP6yDK4\zS\S/E3Kܗ EhA@贆=_^nNK,>:\sqj*v_-WcvR`Ey2Xmr+qtc2pI5)'fY% שk}  1;BE2}YWԄUV+%Gb10 z(k'҈,A*t,hmV ͒ [D _'Bcmkʈ}ok*~{!ھLeNNwqlW%Rc|7J!'`D4cD"AIE׭ib(j ݱGx%zSNnK'Z+IxE iQk̢kO`ջbA2>' rF!3x\WzHN.o9j|k!C1Qk:qS+#zϿwoHL7LC?W]߿Շo~;{TjFe-@} RiN Hpe& % >Stg͵6iLs83EʱARL*4m2}rJ>%qrbC[ZQZnJ _h(Yl*Mq2je@4hMu>(9#piiz4j n \-' %gL:ef6 GvY?*7Ѫ2%&rM;n{f!lTd3=MLj@w(z:*s;h=yTXkguۖdgfbjT/~0-V|]ӱ֥ӫ&FZժLLnirݻS=0Zj3E(?,r AhKJbl`DE@tq5$.)P?9T* `[%X`;V'_XݻVBN1 '6;ņ/Wk[*>8UY8 =S3( ʠ`jG(;;C}bu+j/*! Gf7z8c^jVQLX:le匑sV9.ЂDO=d&B lၑ.@̓ fZ/][ae,{o[6/n>Ia#i(Jj߁+9Sj_q=wqE&զeAta?0S*ؑRÔ[ƇˁRkmOjh_aCU-9̐J>ELtfbuc#廆W(]=uόn6Xg6}kM752iH\Ͷf_d,Z0~,jZ[P^L0]1[L;et2 : Vsr,.iC9̳q=yW|'Wmݻ4!r sTMCv6KIme &bl(Kdiyn{l Ͼ70xȷ:kZT ^N{Mg2 [҅3ixD,2Y4,\oQF(C 6R`f6R'[sHü?TEmYI{&&3ӈ*GS;X_gGQEUHEd`;` * "#M-Bz7:fk0 $y:R<(>oi}縋N[@lnSMzsjC } &T"ěIPLLb6SI>ܰ14ӇsJ9̌aQZ>,P0i bKM2s %fنuΐb;$Ot# L+4y1{ސӱn䬳I/ڞU*Ҍb~+ Y"Q]iVil7_t%llnTg ƍ͠FBm>\J="AV!m&9=޵[yG/_1)|u"?yo.VNOUW?pqsgW_}6}V~ϯ߿>^_o&u~$1sxWu?tH?I>C}~}i;tux˯~x7o߾}&ykǛ/׿ݾxuxՁǿIy7o߼{<곿|ooǛ7ЋWU_|_/ӟ_~J!nޅ<&)[>qM|P,;@?uُCqPP[|6,X6V;eyQr|{sKJ [C.[|b˳ ljGVT&GJ+uUXx/+fUgੜnL@yإR<î?`GIy7!Dj7x&\aGjhӞ-O<8$1)K:\C4qBzLg3 s2xJB v!;~p yY`S7LF` Ex EG:ё ݋G]n#"<&[wFO ~vR,Ð eHCAs:u9VH ;^ևy<7xyV7mu`Aq ;VRA{ب{% 'Ze\L̃u` ѩa0#lDsO) EZM=V3&re )N'$ؼ X4GF4k +UTƭ-0ݬfC YnmVB2F9y 2hWKlIJ'#a$l.p]էar,k R)6"Vyf0^xtg*TcJqmҨa,MQtNpF/)(94A -e8͚ڳK@a$Y?-moJ|ݻws(ai;<.W_8}3ӯ.}p{g3r_?^O޾7>|F9{G(ap'UGZ84c0..جQxkdjMZ&f\ >`rvXsIUdiRiy`AR3b`X$"8eyr`CUgOQO*5R>f\Zdw͓Hd홬IѶ5NCE0X+1$rg5Rҥ>L@<0@4PY ]G F 'P #hI[Z,Tΰ1ꚳJ>kcqgOZF :kPײkK:+/N>qg.ĕٝ-ˉb7൬ U+ĜXESb8b-cVS4CڊBރjN4t9Aep<: _٬B&l|Keƿx_n޿wp_x}9̱&lӥQ%S3}텺U#琩%9cf\b؟~΀ fj%fGE5i궫Z~\dvWPÅj(\;2MQYzOk$ӄYT)Me5OP,0y nYWttK+ uiu+% {]=rS#sMrҿDjH3_vms=Ѥ"L%0.I&kznM&kŝ`ĴSŶq$$mS*2 wc/!Ⲳ 8lK=a9MZ7Mr L>-|96$J!QFB^Tq^ְ% )B!q7Q3qc=M] ;巵jj JW9W'W}yߋG LE w}ihyHFY (=˨7L.plmX钾 LVS,KN]5&<7Xt[X]e~n5aC? VPR\coUb˞J)ĭȅCz:v5ns|w)k!^:8-tƐ=l֪`#2kgձ&,i ]+KNx:EUT%U YLYϴvK]w7fYf! ^LIqtNյF؈*n(|&5[͑*|:̰-Aq[ɟgBd!{d䈲+cA#JZOPt sA -aGGpg#]95R3ej oʹk iS6u8ׯ m3N#Ũ5xNl"XE!o!V-A'bBbmRf=ىgzJkσJmZc0eM2ϿUg:>b\ N2tXkZ!"!}6E|Zn.'Yp뛇M-.J]f,[nF֖Uy-vmgzLBXr>Duv-e#&mQ|ǁW#k2]m@/uyaٓ|3#<`${ϕLvߎzp q|LX1BP%gbsnqɀYwn!@l d(*[ 3bA)eQrZ 1`DzU82OreI`AkIl[Zʦ0vΐU`DKLbaP誡X(yg֙ʪߡbD dZEA SGsgyz8K^I+аħ!Éa˾RaI<[X(qYj4uXaJykD DBju gcihU#zU mjT~"O04Ln{jD+؎ Ti۴dI"x@,փ<\r2k9K{vaz C3~!C^BKf'4*+Zʱ>Z=M0cP,pfSp)ŋYm-.A赮n\ ?KHJZ[ЪJ [RK(z)YYobœ`^Â9` \aTzkn6Sto%pݙ4u&5:W]Ww7=K(be$`V+ƪz|^~ҥgoR[ǃMy76o7G]?ojыًZ%UI{߄A@%٩ߔcՉ)k;8SsKj{%,emVm0Zۄv Ez6jZx1h8\ M+s(]oh<V Qsp,o L@[4lYNl9K, 8{|,d3*cz>ec6$3U;esZ5p 8mBPMz}('tYh߯k$ br%I3`"y%5Wk? `F>n^+4v-0G o0P2[/X!$jmxgYH:_ `Qvudf& :!mݚCIBɻ|cJ*vC+DD\%۝ QwrPbtzFn%A߁\Ǝ*jvvj 3 SX hQP ǚ-i@AzТv\S:MTۂۆIm#ض\˷hn3М|T y~wVͧK[^qx@oKtu#T /c(~u~Qb`U7AQQ$`-]X/ `#^,MHG0g'xiA8F0Hs#;Z_pvZ%_YquHړ2N zdwE_L<5sҡQ|B?ŒnPA)pJ%'TV-Uս\z9٘CƹR$7r յ zfp*vqt@'XSU\IO32RhƎ nc=r걠{V"yI$As#sie1p5 V 𚍛}2нCdj+S0'C+_s}X1AvYBC0yڸ`Z~6֏LIv=k5j GR E煘3_Dﷸ`)z Ѡ-KIߍ2e2:o{۶$nɢ^_sA%:R:IzkWݞLfSiVP8k E8K@&t)B\W+lJ';' [OZ+O3Ա5W,-w娚 jh TG%ss#^wjznTUx+S"cqr- -5 Wmz\N؁z! @+:'@Kq^VM22y3msTNs!Cg&0YњNvh]єь km4כy#" ڇTD<|%ֶTCzq*6Opw~ԢI7˵f-&2Q!zsqߦ&b55>I|`,G!s^hjىyKn\7C͢,J9n1K,<zcS͕c(^͟{h[*VӢ5v 8n?G woHK*AH䕙0ߥv';KڀY kH,N|n?k Ȩiffi*rijig-5}P-QSP]4ɀuRFXq?W[B[-Tgf gQ5Ԃ_٤b4abw g"!tЪRrw!OT$^=I2 'kT z2LUDoZr>J:UMΟ=HoQ3{t0÷`DڻIMΨk[+ `P ʁ%%rY 󼂚Fef09}PsqM=xV@zHh)ejuy_jy(-}粝ZVͻCNsn@"[PBs""Q%[%b|AC F2< ɀMycƑwN7K*zMV؇AAL'= ?3P&x(A UH3W|\ G[Lc9P:^Ms |[*chuo Z+õ빲a[d8R&KU=gι[XP:hhk TtjpH*׆jrDi UH-dטj)coD#AjLb?5Sx.jt;4UcfgtB5shwGZ1b.*k.["F/bBC)}k\Ǒg~o =10mg#AP\L $m@@͈Ȍ"䈳kKuoU>"qND/#؝c<۶?/|j{\N9u|yc|;Op=BD?񲵱d/=4vLi?d(O&9x{(3?ݗ$]מMNONѕlO>SŻoSI֣mD~:١ 2NĶ07]&ZGPx6tnO 8-b:yF-Iq$GC&麾43_6M/x* 2aȋ0FPN qFӞ)eD ]y7Nճ>b҉zX!EhSwR* RbUEvDN”GǧC*%4!ZꂪHRkBN1qs6P=Mz@㐓%iu*cWNrFYX4;PITZ+Ӿ}v=ОΑro{U>@Yj,<(9n_AAs$ y*厩 t{KŪo6 =APD#t3}z&`yTe텶1T+7!bCLFw=|蚠Y HVLvnliWۓ yCc.cH?A5iHyw&iw ~݊WWގd0餺ԋRQ ]|I%E7\QDV:+6aL>0x@p6L.|D|(.9/;.dPDz8Ĕ]6^xz~mA܅/" $Ba753!.깲~}UOp?,- 0'n;ؔJp g(~͹9{)n*o'-߱&;-G/x=uUbΧ:=dt@n$dk V1|Fzrq x76۬Sohhf-y, 1ry Fj&t~@.x=?o^> =Ns/wWE%Q?sw;ߗ{xśݞoo_߶??_ϛ?ߴm᛿(ڃNH}@ AtCHE>sdbwSis֑[9 iۃfGܒ+56 #4W|f9`>6r*~:saM+i JGT}.E1H]C6+ Ve #2c=/RL <B 7Bׇݽeɯg݁1-Ďm-h%a%ȲiJX{%*[i̻Zfl-vݠbNYKe ^/ƒe,ˀm ZO',̶LkO1AsO', [8ŗq1cֶHSc,]!.q)m]R2_@yn՗\+y툰q=q( qI-ak=g 8suttA˵I<I˰1a>'HZ"m\|hKر?!^*"c<)hh~fi}E=LMTsM[mZǭ[Vts%^*1Gkak]_ke?.r@Ima*>]>-(}A{(zڱ4G B843^&E 8[-i&+W'w NƣUZ%-n>W&AKS%C%yO렕1'zaG_ *% a-k)5kxF1eD+_&-=;%RS&2X[>yɳg3{j&r;ee`ow޾1lK{qw\~㏯io^/_п7_{~߿󪼌glñ/|//~~}=?SKOyR'ln?؝b`q ͬ{ٺzP9 n$>N6/&ܩм~< o4DʂU|ʥ{% Ό{굟;њGQ7ZX=)gejH")~0C5%wݺuUS(_N2-E z[єDI/S+LYoc;]j=H.M0Ҧ}S:UEN#А[ RxG(UE*a0bv*ezC9joJ #-#cSDӚ[b_2yDﴏ4LpR &C c݇A>j'@Uɧ!5N$Ѱ P Gc7bDKr,Ŭl8^Ķ6?0|rWz}AkJHH!)~Hl*Qrg7Rϰ#qEMj!g6IIC7%Nyqt6cm\dHՁ"'aEyL*muw{Y\xPvޣc^1d&*;~Dt.ȹo s&F 5!tPmϸdz%ʉtF/ u )fC&?K\{tIpT._|,ƶq塬E2+‹'k bU5iHh]R[ҔOPz:>.OJ(Ѥo<=Z) 4J!(ٸ}NCa[~rS0gLڪ^/eG#n}ۣaHB[k{ev߿)ꆤK3XZxM%'R~M稼#ۭ/_zqKo){W*\7e=o P 1//LKDڐԄmƀr+uȨ>3î6wVJs=)R>umlZbV:OCx[4X5LK<#+'TkwzgMHXyg.=CL~FS5ilZ':7CgDS0Y> C3̰Ү`+kA_w߷0CtTP'%v)1 n´ ]Ѧ i] ? Y_ 9΋y?#+lK$Sс eۺv|Κ?Psߖj-jB8N8{IزXYr*Ie/(@`S28bRb.nٻwrYJOk*1 Wq̦(PvS7se]y(~ *1(`ݘ671 16e gbncy iCwJItaVCҾrr荲*ոfUf ?oy|0dKĽߑ|Va5MmrFĹ с9~ds<(4)I,CuPT7"r+S3&3 4N^MHS&"#LJۄ JoN&]JxJжa+] 12i$x/HO='+3G6Qbn!e},EKȻ˜&n3I4W`ly=QP:$$\?XXaerE e\B 'z<ňnp'n#ƹ)!qZHX.3|fQ{WXd5>svrjL}u?~< Դ,LUf Y>x>PyrGPT:!Oگ=PTi|@v@6|9SLQy0_J7Ջ=>H&Xc^hTuHNV ְ&j&6TZBMO MX6yd2.![I;Z{UP =hzn % "$D]Ė#A]Co`*,-g2)l=D'Z2eT +M8Dm+k*%C#%jh&^$|HCOJY "k%/hb${h -+vHwp`v#W|@Σ4N [Vk3{/D4w]/2^PkI ]+)K-mn H(,68aAj$6^Ɉd@.9'aA[O{AUPc.mvale>,Cn#V >~?;搟}~9:8^k93pȉ(l?9d!]Cʥ>D8C!^m.{" Z|*_q>TV;:G:˰.C"@c: mv^^!~^Gd(i]N]DIxKά8ob!DKUE)dΩ‹qG|tk `w^}n4 l/:#^@k1 BU*qqdBH(}kvƗUu.v6̫GҎ"kgJ^T%Sˮp$1P"]MHN8~4 {$#3#ؐDL]du@XCL09mjw*5G@vqӗƃAݑJ[_r`LZY&ZuF dJֆ@ϮA-PFw 4rF$QEƒPga!kJ3-9^JJI̾W/I]^vm1J~dh䊏kJSQL6NS^{4#PlTح^ 2SD*R,(%Pnp\uSV e}92j^nplVQm'g)9:]!Pj(#س<{}@;*-!YJ~ieAYc Ӧ|"+;;.1|?'u93S/ayK?F۰S\f~7q'{5Y7 r~S3_^j//5Rwo%?ĵU z ġ>ӳk!O])f_~ߴɟ3˝ M?e3ALvy2 !,W2Iv'|i(Kw(Bi[# 1a|c\[(bWVe9 dRGf% A}߈e){ 71gWn1GH$.09 ҵ:{G\BO8w>x5mɔKuxԃ LW{~ȡE`]8Rkz,F iK Oιņ]*ַxn5|pҭ”yz S1#m4 TB%e,;!KNwv0V ϘTH|\K:k5aOm:aad- uM=յ+$vTEEZˢnlk ͪnXB$ v}JV,5?A X#rݐ;K/N>9?TK;2GUu9X*1#-ߵ\bY ` b0#Y`{_oR(soK:X7ng/A+f=.kp7 $m-^Pk}_׋f܄tUǮҶ3&Ya8 EL9q ˨=l/tV>&V9| 8Ij,=YnjT$FcbBzĵ掭&:Z0kt pO[e ?M@lFVA› X5(B=Q.(rN8]I.T= Ҳ37ڎ+7?Y޺ntHq'fϴГh `hϒbkb%݋0P-ےx.&7㩱K|zi zVFfX[Zgڲ'lj:QVRid|km"x@`E?dRӥVRx ۧci>֨m[HLٱB;e8|!w5k=;sJZMCv~3'G!.I? =^,P2 Ma#({x:+O"(w+׊['Kzut;BN{|7]EZqUŻtdBr0?!/]!Pk˸n:8atD뗂:)dxq惥mm1nBmTgnNDޮ Rn+OJcW!m `n\Ya(4ƌZxP+B׸G8|{zx PVs/JYo<T.}Üpq^tp@*#&i6#lHir?guAEXF-WUǖJmlIUN.FX扃@XO ?/0^4dOR0s1eht:aRq9sM{Uu$}ؿ6jd-wq %=icm8֚@Hxֵ`Oh/nm~~3/SBXk/FL끸w[O64֥bk Œ2K !ko8U0%hZO ,\tq\~;>dk+i@DMMS9I]۟Nw?y˦?IU嫷_DսIdNGmS{`&C:2j :b؏5W+apE:pkY$}9|=J}DDS_WtsIutI\YpW4KI_3X#BLp>r1.V]psl-UMRsJ4CC-%mуcJc_T$:0DL> g;,'~e|xul]K.(\>Ii[:J a@z+ewe x3kͳ4-Hecz>v@i R O_Yrzhg'+3כX;UGBCc-][o7~ @(x̣u[6,gUdV7I&$~B:kwV,-|B|vNpy QgR܆<^-^mYL PnoOR;}l_P>!LÇR۾'-@EX@X(=5dYnHurN~YMM"C+\6o+PNڴA/MmL`LRp{RU`N*xn;T^)- ]6Gz:ҶhMDY'%YV~AeW{+6)J8DgOd'8Ǔ&hRi+/gQ!I(,x ; DBL`4Z^y` E/hЎ@x g)Q(|%UdO<Iw  Y4tDGBWi`H)o+m5țcqNN*<eLޝ)XT{1 3=}'DH532?!KشbY̧s<3(~;L=;dQ};oFELπEdb{%RSeaydY'r<  'dNfxB@C[ązI(a|)ܣC8yʢU!Mk7 n#wVe4R2MU3r"MEzijybe9uܬ O䙬9AF>1=7WMż^.(xiکK#N} 矕@Gm2VM:_,Dx:m5.Ru$+ "@/':Jtrz?Z/.R~y?o~Ջ^ Zͯ_}ʵ Q~^>;=T^W/_⋿?}-ͧt'^/o_~~v~/_:MO_?_ yu֬B aCZFl6*Ch'(Px l_?9[ _e' ʁU$/P;͢ă5.Q үFAQ#He_9E5UFݓ^s\:-}w`TZ9PupZ <_usG-<:Y p;QI J6$Rs~E8nNq9T^옅ZB` 1ߠ A#O48FvS3 :5hGqr$"iܜ1U,PK$az>5 7M P_ =s('[Uh i A7ovW cR U"M}\lz5(_Sm`1KJ:$x$ ģȣk ;(n̆TܰFJMmOtvlOW H

֚Jp~Ä$Զi͎\ss rBLíZ]''Z^_#& (%2,"=ow5ƐS֚HBۊyK 'f7!'QY1sI/䴜mRԍ]Unqa0yS ɄV^+2oюMH-U qOfdp5W :`"Φa*~~!Y8첦Os[ n;d=JFODjv:HfmFj@H2T'| 5ndR^X"iOH4%З9gd1 -1'V% 0{LU%1"p YOe!zM@?ljVNΞW! UjJr\Qt)`1\T#$91LMR$3NZ-E3)k@GW)0Txp\ Z])-<;VU J 3&iXOq<71]%-_Zb#Z!*c[] BغD>#[ a+Nj}vտ^y} W/._^ofho|e?>-IgN/(} oEBx?v2?~7}6o_]Iss_7>yxcnϯ]zܽۼqI8ct҉RM1^P^eXt@$k\EŻ|^ܡJ݀jju&eiU"_:<5;6 3TWX~GeOr-ԛ4j"w ;m"J"lAOV(իf+1ƈtBż4:][k x$d G4}74p0xݗЛ^ phPVV],.3ھ \ z1q@SZ`ůX d)]220xh&9hfX"4H4X{Ҷt* +;68CÁ{Cl9hNN!זi `23Ss"P`ɓ%1~&s,-ʘdvm̮6W#ˣ$C:;*Ijd7dB#VӪG@ʕNf<)1h$mܷJX6`=!ՙtS&wK 'C$Rkj^--[E_M.1uوt"v ^ۊ.;'Z(\ΰ± y[TRn445p#搭b:RSn j{%k.4 ,P܅ڮO2WOupFX\vQ>~fIq: ˯8}wr. g ퟐN}O)o߾}oO~} ]$X1˩ [aBB1YbUwTV洔/8ظsR Aل][hU@viW ^r!0σˡ`RAtV-&BZ+kV9W/KH9e,Ϻtd7{ AS)U}f-&eقhzhV!lI Vw  5 sFg̮55eU@֙P4X`'RPʬYmh!S2>7V1& ,,|hY7eTx>k;np&mCtdըͤA\eU'< YfY4M~-Av] oZSl@3ͽfgL*N4x"g_FF^@mȞRnd0I&zFΨ0\ n/]ésƀFԌʈ$0@F%d^YڗɅB\9G9/>_~y??׬&,b;~)Bk&? 9-qW#mٖx3̘cΚ 4msdQ™(I^ ae+&–Zkz#;Iمb]FS⍍>q6)&:L%ynb> Atsĕ$/ A8Qq9_Bc49 R2>Ae.gd.4#;:<\bG<\<~ l?e.c2 h)b7$9&3>}la8'b? i^~ !m|qϾ,iGܚѪ?G u_bJDYizѸ`H2/21~.o$KҦ et$|vjE(} Xj@lX];NWwkK@ }ׁRI.aJl9Bt@nNnvzIVS.|ߖ(z:̲5~ _h>0[jl^i! ›2wg]K^Gs`4^ 0i8nDŽ3  SvPIJs ipŮMÐZz`aqN!Etٌ~5^zc,wJyJ2L*b4]z˧dz%+޼*?KIa)uc˗W_!{kO/QO`l\،JK'[\.G< ]|d &>^} v!fvae<~.) -iW}懴^.v-M,X*n:T/13.7X *Ih(. |%(>,oډ,8NR֖J˻,D6of)^$W2yafCl/m wD;QH­b'̲Qwm n`)e~5 haEYbg8ݰvd@cx_\,D6Fb1<ʴY˫¾T@̾]NRb2L8 > e j0H`!,ZxȋYfܚ0y;cyر(|XCLT;&M[ Z K,4*@WC IW-uks!vE faV4 xX`ѲI[HE+^ѶR^_"qV'+ꤕP {}%HpWIC9JTF1," ٨]˱讑hTxqFg65jٻ=Xi$gVj4=p/]R9bj.E*tC̸j.q$nxdp.ǒiA,tCEfCU73~%"\T6ǣ56ݲjm 4vCpێoԳ隸^;al1,⮘P6%5K;,O x)TZإl?}I'0ؤBl$@x"]N8y1 䀴Z4 ;r q180XMv}WJ EhZߋ%F}N$eM(8B[< e<IL4Iqv&lӹXKAlO4Z5r×SC9JØ,ӌ0d8VҠ4Mpk|#xs 42$HQS4HhȤ+KШ`5XS 'j`Pܲx %|uNE&x%7FS"苡~瀲wHA48m5nR {ThhdZaEpe/j4=9ZI]C-W Qh8/!@ p$ם=h$\hn&eI˚^WZ#o=>Ʌ4BZnan?j˨:B?j6:K,5yo&jCKjX4Й "6wq9q_dh%iч=X.nJ}UkWBcui76@XAnVߖ=r]AQ\T`[]՟[GuvO 09QdݳH,-G J =5}+ ퟧ=`=vXhƏiTvunc5K:U<ɾA]TB!#`܀<\ݮk" $&|TW'B{2ЧDp0x=S@`FOT~p)[%F˅@ Q\ruch U:X^jU͈jle$40`աXڳlXAb JhW 5InC bbn=HŁe@n=`qz{ni%eM]Gg4a˦ݒnOSU,z;EMQiZZCZ`<ະko l~W&wjώs~TPH8t{ЍZ}'(5M7T .kdLg(R,˅7mЁNT6}bu餮Czk7Mɜp F-v-@qHq- =eCLj&5wT% $Q.r#IlrǖeO+.ڈ`MBir(K̾{!C1s3/[Y9+au-PU5԰aPbt6b$rSRq9,;rQ,x 5ʭ6x?_<ZF?ivE(hX*U:&F[u,s#`@&M5bt J$ԛr%UmF#~H**݊]Beg(g/~2!SN1tYu+j˻[wݧ?!ŅHnI nrn#bq  \K2*ٺR\Ηt#Ge#Ԙ@2{ ;,6!0u!3RLc9H\p\AJ|^Clh̨21 ʢ5c! C դEp^~! &avYe .]& wUr1, ;~$Az1%^v,2LC $ۿ78{α19$DzpX09wStjRW^KՀk-PJLj 8s2cg>9C>_gOpӯ? Yµ@%R؊%v`7,mHjbuTnq3Tnno$Kt(uCӡrWaIq::EїW?mj׏\/Y㸧 8sBNf֡?ō@e?9m-rswS RVvND:,q5739^lXѬ0ԒMX m@֍Md6 4`rߧNs1F͹VQJ_ʀ:,GfF3 G07ȱ Ie*@OnarWʞ]AeMCWznv^,b;vQ*0$^]*'Lf].vBPu+ն`y.rr*r_'&lI&Z] )GDMOaK8#IN͋f<י#r <]m'F^;-b Uh +XFON]r/Y]r/~}w?ݧ9ktsݪ;N .߾&ß]HX}Ggta+rFl5UHw HXR`]_)^aژWjV/ۨެ£Vv>r+bo]ѵ{UYRW5IֵMM~ڣwdxXմU>ZīJ\y5 }xQ+}(*4n+msE@]9a  B}AeU Zu(Ԛ Q.Xvqذj\) qk JH2gUeKxPhq$\w JD55Yt<;JۯPZ;-E5$g.ĢZSŨLA :m>sdH,p Es,xQ%P-}+ jf Hr˂mHE\^>O `֗ۅY/7. &}NOus4)&%}6&&Kccz8=@;uӺ2|˃[r]*4^_ʧqDծKPYl[d`-o{#e;-o0m^O>v I$[hZt{P2kjH\dMsgG2(鳦Kͺ{@Ke".yIgϵiaسxDxTWUmx=mmv-rO-i4r b`I -rQ.Xæ#gC}BeW\h72)6vnO::YMAGہX뫫OoT~aoBA&FͮQBr%^9]ggZr>R/vl_Cۗ5?K<|hh7w{uj_uHK8~?~lrw狻W~|w{r뫏Wﯯ_M~et{\]:O=W/o]zyŻˏ/۫w/n.o?\ЅG_^|O?|Iǯo{{*_~vmo>ӿ=8yߦK>?۟OfEg+P飼6{ף}j>JRv+dil,dSק޻jZb{OI /BiI V ˩>/z_7&o y}nhBt&Ӏ*ϝ=ם(C7̩/xs(_0-ta=J4^6WIc/ݲ`oh |%O+ɐ Ɋ֍; @E>ѹ5<;9OF߽˖o>?xJ`J>:hcC>:9:9AWO>ޥ?y~zXp6&"'K6sy~㯗^|{{_>:}v$֒I/INOCJE,Ibi 'J>Gi!lT H|5"l㰶m3snU@lz0_ǜ(tBAD32[{LP8r)d9^RʩsK0C5Ci)=iC]#GA+s0֤@^kiI^zrQتl=kiKa.|%UMmҤtzե 0FѪRa>> `@w½Tl/f遊G@^duqhԨm !l(@$s4đaiFZ.\Č|̮1J]VbC0oL&.Dm< Q CO.j8k]a< MG{FF\%4įDJ5 s(.6ѣl@"Mص J`|$R:c_ AASk'y&dCq*Ν@(yJ^B[ py2 w:_Е.TlˠxB]yQ*苓g]sH{|l{~V}\^_zqs&WՇezTG5%cKoxͳ!cKˏEkYQTYj JrHՃoIPԼ@SkuII &|8^>Qc%QYdkprh`xhߦ53◅,S ' ]t YY/=zB = ?a}9΄q`qDCcLG T~LʶÉǼ'#O.v`?^*gOʙ ~GXLc]#-3btqىt53ۨ\tG%T?4ő;OG*@3m4CvC0;a5M~fCr4sd?]-_g{x` –+J`r8/ l$#/={/ɉbpLDr }kP |Uڏ56q:\X--Y;=!BWw`O*/TʹIhy{QYZW&李֥DpK . 3ލqܽ1ٸ̏Z [1&^AY}l(ч2Xo[,v |sOG )}~ʫC-sdjb|玙,[>վ3⏘Q +.]?;#dX3]iДVw%X߻+Gvɥ|Mw/kߑhKMa3Lwlm~\tgĉ{n>FUu(Ї'|vv0X@r8d~Bfʼe3r@snQΉӓH X^в2&@JQ'S0SsS0udkl7}g6$sCܫ} |#wGQ>?^KXnOr7or۷/[[On޿O=/_FCaB kEM '}z!㳍_QY^RK5Vjܖ]%R$bgn850k5a6nP0ՙa(ZRɃRT7cegH*HǠYFf]KSivP j2*g41GJ L\*gDjAqrzPB3x;Ԯ.&`R6T:Cvu&"e`q$yƂp_FƂaTƶ{Jh|^puhLX("aKH?)q)m(Z#bb*jٳlP!nP9P1j>:C`fWQ(| 'JyK08W)xp|oմ\.EVQHV>{`$IeI nK9ax\"*dYi^?^w!9$$L04 ڃFX)8nY ,ʷP&;Zfw)Oz%-݁(85L4 #\ՊlN.kXYAxFi HLz ;yt j.m%5v jc\^涊ؠ]=ذ'zAf= jNYl>Yw,\)ǜ9c ƫXdQC:1%`QZ0L/,K/d_2}v1l^0GIqT^V!J,gEv_i>#jJ 6 5gcP;B|>&qQ>4LB$`≩Z@:I/JbSZ%6];İaduЌdZ*'$>A+Pzj0ދ}=1v*?rՇ$tt[:snU[>{F]F-K[a_ub]3Һb*؝"HAv=4M&iCX5#kF45:7zbJNO-ꄭ|ttAdۗF_zscIWK${?Z!_>\I B3Sr:lC$ wf[$C0lAE_uF-nc(k# G]I8X %_j4@BBpmm&S!ԣHxiFs* s׌E8b[K2þ(lDK`-r)2i@cV2 p%..x?UO00gZ$s|'c/@,bm^RK7bIY7[H*Flb2ش@ 7ָr +rRJN͐d0xNMN6d&;~o;\6l5\l]e@* 9`tn&>#њ=:΅*:4Ikjr=SC| %K͒t*)_KPuvF, vRxT hhٍD^&a qlf398}$LB!T[)ž'ؒhD&*@C+cR=pf .T\ 05Ӑ]Si5@:`l(}|niĽ0kG?;w9,f %Bܮa(cy7@TsZDN"FlC5[Ɇ|!мV#劲eqm*J#t ,d^*)-; I8 9P΋9+V_ޠ{<*%?;wJ;fv[fwvBP TTm-TKj-Jf< ASGٹcv״klh?ڵ%}NunB0e{3bFYsBb y8# U/M-sLi^Mitӻݶ\?3W6{[˖gvjgN=}(y/IK~zX/Rݜ癇G̱ZwP[rI~׮=TlX(M4 |K\;1kmL.' {%e80K4E/ 4n#7nqԐoQ‚43JH VVC&5HEȌN2ihpeHXyhQXC] KGt2\2~߅5jf{U5oD&RZQLreF (U޶ Ok0O9c4D EeIBF9r9ȗG_Ik(XY# z8n͔K-!@kk}C!°+8 3(^ 4jx0 nYhch4ɷ(1E޳_2E^Ջ7OqKYG^ߞӇEs QEl9bmUN%K@iXh/M$^`>{0Y CR;K):[9s6#h.k$B] -@Jؒ `$ɕP`smVwei+qة8 wZ^6U'$DTM8/gF}F£/`*BC6}gb|wm8@,+qVȒR20q ӁBX:%gh氊xƚmn8~F,$\25>:BM? %i#)] I ? yͺN)& >5$:eJ~Bȋ eJޘN|r6P2<,ܒsRx~bn.mBCs.7!`ʔ<3iAjFp 4n?9<9<8 ,%pJ?i(|OKgHQ%إPGe`7X9]~F~)Y1*) R,8Mȕd#l0B.נ7<8ÔnlCr?˶w;לYa7Zn!sD$:bUsX8ߡs)%Tpy*y"og!Plk$%(| Aޱ&"sšt!@1M K!/Rx8ʡ pQ 좆2B^ۆ#5'MeW~iVƒS#<FŹBо6 /H93ۊΏz^<2_Hź\-bq˴窔8xvmdP~4~7kp{ֈMH=ky\y_7˫޴sx`JvOYX F1 q]8ۧM^X6 { W0?r`xז@`z |%wnLNiisVlXũYdcp8HKF!+6zQfns@e= i Z\;We<2:#cEtȒ @ȋpV9V3.58;Um/|'Ͽ?~7߾޾7߾?ス7OUŏǻ_|po?ׯ^|C:O?zW-#W;?\?3}>}O=^j={~s*:ﻛyo7_Uuw7BޢH)P;3 %rn"/$)( V(4 {:jL(X͇H:-KF ֬9_Էd5)ch VБXp|A5>EmI$JzFݨσGY1 l@IHlxAPY m@50}"ll!bAST"{e$d"sL@=8aަnEEI&ƌ;y6 ~q`a"Z s<4U& v<,=eDLV1[ 0HlHȡ+PNf%ȭƠ0VpV8C nY,K+ѴeDĦlqJ8A?1>b<+eFbe߁2h%sY3N#^5j@f`%k6:,qGkVي? UE/N܏y{u9m<)<֖1iyYtWjJR2 Vhj73-,$F8rybv,ڑlyS󉄀g pMT aP1}+'Gr(/Ȫ-]bh=l2;YaZru `yiyj{+DLLj!W^}.Aq6º\HaߞW˺k]LΦYP 9f'"&Z)nL|'ƍ8-#Z9䊡#]Dl7iqXe,!8}JR@"s1DN1: z U3'e$Y2؍ʆK=3Qcu.R[b`rK.va, cD;[Ҿ ( Mn_p9jYqFr!.m4;+7 #}_?6UzE j~l!!UC[vsT#C"8l-VI=kjɉCDU]r3k@)@}Lila\ s"!e.MS1e$;t:;}Ѣ2;2VQhRV?Hho^0E~Ȇp`8 R×!*4Sm‘1/H#[(NrT{fG'и]{G~ ÌkYƗAv*̋F3V5+DJhpTdVXVN#g22\Frb&eۅDfM*AQXLWk#w%#faɾd%.zńf%٪%yTTA+=nHsxԚEk~$]5~ɸ`Q `&9v0;PbDu8{:zzf>W<^ϯ_>z?F?|ϯ._ȯ _]ٞٛ_?p8-?*|#顓Ǘݛ~~/_*it$?8(">CWS2^7$te \unr=GIhi=R3%c(NHQb-<,=x~l ߑmƳ1>p\hx[S_@X nгm8l~1393TCN7!)ݸ4ǐ@A3 J;B){2& 6tSQ $[DzҲ?g[dA7t?*Τ,59 ҨV[EVXZOZ9h2mri+7$eS-5a`Ѿg*92nm9á1{ZH#dg u߹&hא)HZ]cL΅QɉN'9NǼ}dFz ' DfP %Θ1b4)g<=!lGΟ Łz,?-52v3M'ZL8Tdvm)3GRc-r7Ym+Ln4#zfe돗kcq`& ~[rp\NYH4v3t_B7^+JE0f J1?vAo..'OkH />W߿x>?_CĄP&O_:Zbi+yU$ "1ɟ/bEW)bJś0 T$?[jpo7 U8P)6 !dؓiCs,hz8NSg/2ɳI,2}~B!r Bxdrs=֨A-l*A\M !2DGJҡ1/:)UKfd7Focgk.*y.HA !l,|vYC$% :"];lP%-D@ l c$T^AOxl@G1?@|Dv0dBãi"2 uЄˁ1]VrQT|fcgC ID 4 gqIoK{rԿLypza|܍ 17L@fQ$/tC;@4Q1Df ,$m}ӈӯ#4K84lj!3g Vo,D6 l"Η/P}0[b1A8iMr=jX..NMeY.7`Õ]a=Nh4l <ڼ.C<=lI,VP|Pwenf2s;@GoDiA٦>]lf!- s( e{W,ux5,RR MCY$TKt 5  |{ B!0ܵ1냟U{,&PeM h4>gN$bA&cwIYʬ'E3e5M~k$('dsI0$]soI󅜁0 9hyD_%]x":4aHi{p:]hreM;S5 3 Ny)GI5>03> ca@,ShBVẍJ b!`$m*L+e*5?Y(3@M4F훯weet[ AxG}p4=̶ gF $ #XoyBc-F![͙xuws>kGLaFZxG!@tyv"格|D|:*|Lϐ|ɬx Uϗȇd8r=PVb12^b\f8w\0*P<Сcxd&Fxa L{n癴F Z} `[ro"h 1}"0QP8@h9L"'@3d5Z $kquEÈMOâym:B nRx:FW͑c7}

j`Ew"h `4 jJ[qQ$-ͦff 3# oj3b0!r$@ۆf_OH ~AOiaD*21ulb " $KWqKow P([~Z'+U:oG ^(  T,;d!*L(HIItqY94r rEh=VNy 4(Fd48G| jrD&]<A훒#hick;DKOOPsKd!`U#AR6 5SpJ]UKKJSe6!U]qX,+ExF2{ X|{ʶ,܎j4`ެ-&v1# me U̪@xe>b9`jĎ+`0^?Ɍ"a,Sp:Kwk\\ bdo=$]g4RߞRAE<&j\#W`l,ƕZ*|8Z GHy3ϣ#?5FxO" 0(C'*8*"Z_tA2;9vBGh9`Ȼճ|aM%"68@pa+Rn\p+q6WVK;ˮ=ѐ<'QfhQt~=Xr9(juMMb<`&m0Ee0bh>ˣ}yQUw{ᗷӻ~o;jԶT}yvC⅍| ۍ>M(-9 X.)$Y8/$UR.^:T?wCfa 59iW'ߧG.LF,F),bh3&hTyߖ>`k;/LNck&a`<VM,S5JŶPhGDtCSbC7 MӻH)$'*@!u纀T:ޜREe ȼ=I:=\̩.,nVTh] ^<^4y }1;ڿ% ?.\T@_1j}c@&*;>?4ic<8o IeIC+LllCs~)g_ށCRD3|c)kzGu%S)vDtzeqgtSL[+io2K]zTvv%cL% jFlekC)Vwpʄ$yWn#d$* 6D`fpA:[OVmd5VGyLӮ(C_ZE؏VDSΕ3d044] J,^1 ʥO1Ь*dM%YN2u <=&%TTQ/Y>pPAiL]~󬟜Cjs2y+aFh:OPIr8mj:&~8v [VGbO>4yvHKYV֨PNhMlAAY=5)GoY7]ܨ(z^0#>u>v֑C8@f4 l+&tTs djDE$F4u׸{h6/V4CdHi# #3)2B~>S{ AޏW^ŋT:ddwry>8nzT1ђ LA^38ؗamI\K/>7ܗ3Do_Bf_p   sH%)C c]}$iO\#y~U=sH;F L.֝֙J&9hֵ렰 +-̇@4dL:vIB $}0ITn%PWime!VfNJ) RX@qin$OEpnfk)>iuV 2gmeղ`v'Jg:`6s<#Tj&F\| U*K<(hk+Mﯴ"jGPW;.z21Ko'-Oצk$mR"5rU34AOX kj5KT,n^{ŜycҀc~g +˝\;TM\ϘgԴ-6Ys~MVScVPB]:֑FS(nEvujiF^¬yK7LMfi]0qf Xm+5)@o Mm}*4ǟJ~hXb(NqƆ䊭r׾!K{}FX:D\{薑]i01.+N׬.;fciE)IqHw #z0ؚ5&qBIOrTǵΥ>( 7;½Ci}[~EJ˘2޵#|T.aMrOXj`I0|GdJ8Yh)'-(H8ʳdsjEɹ$+-,  TboSW[Ɵ}!lzjQK؛Xڟ]CZmQM|e6%!uuyi*+DqB0#Ҷ #w|W8e^[uJN*_Y-p[̉SF!q׹0IejY-6w%El7lUr+2'a5mP{#j sv+w=yV̗2S^%ʮ\W1*F3z+Fy>Qm1PL 6bX (X^[7Y%K6à y m5`N74eZ5N]7nlQ.ER/ܸ jEdۈ2umqMmnڧJ׸hBZj=T5缶RV4i.{ÝuIڂOئǛW/m~\9ڀ_+xuyw_zww0ǀSN9;/+C nɵ t[@ ]7EuZQN6 2U)j_gc<$Dx"<.B2KP@T[讛vu/Y,}51fA\PHS#Vª-nNqg3?([:%6 ם&-=-if| nP/di3۶+XY/5d%ŝ]8x R҃B^eJی@ e(D //8J#qQY W` SjUm˹,6,o=:"i9kh[C@+\$jY=¢-Ծ޷U046PFXyXm=7//< -E7ε<&1 `Rs]XPY5aeV+5ERNrn旦tJUT)(m2|9h{hХ\6[>{ۧ,Lzf> OCk?n6~X5;g:_|y_j68Ko򪚐&%$_ z6moR0Y,5 ;Eڔ9-DneUD'EJO;6Sm,M6E=sxZqqGb!ྺpäElL+TVrZ v(L߹~oz⢳IyY+:kxv}nޔc v> E>O.~Nm4CϺJx(%oww͡ v&j>Xltd-"<Ц@?Wm7uPVc^DA=8y+Ag8,1g7B591 Hp)NJ!YCS-VBUATVlyQhݪq)rk:do:M*\m?3:M~|BX^+t+vwbW:m=hkX@'M-غɁz- \g\\z#c&~_ Ú\[NM'S^ ZtySӯ.ۆe"Q${{Khl8z\4ΘuID4|C9ڶ`x4N#4#$U;2ѭbYCJq^'ϣ3fJQ +sxӳ[ʊ[7 >Ɠu+D9)qdXeFK7c+$ M;?aiN+}_oNM,6M\T7_$ #49nж&dgG̋Mm{|3X2a@{qdozt֜3']>6n; hX)_7sVsGZΪu`(=Ňj=waq.ٚ"c%k>4E)X'i`gtR*vV~IM~ϝyu-9%*sFb/0Ya'Zcd"ajt 2DWM,PHQϬGtla;~f6*YH%!f,0L Ԝ]6$a:ȏ;Ǔf;P"^bl1i#f{io3;){qr^?~l2Zp~]Fݛ7/7w`A~s;p2/NA028BèTUxAxPۚ$;)Z^uCTny#{4M"e3a+x펭4a38,S`І3;A{rLM"ĹAp;^"؆HEpqQ{4L \TQN/-WE&,uljJUu@(aUmg~`nnp$"gZ?dK@BCD}mǑg8VGװ.-3]lOCs2%P OS/=gfI,YwtuS><O=O~wOW7Xe{rnO1g"]=__2u>sܺ\|HC_?|qO oN-77Sɧr ;}=eNGw\kt]:L_\\p]hw u[LQگ/l.> ӎ> 鿢]nuAM/~s=9B"_.ቤsUKS'`YpmX190c7MnwiKx|ҝ_tNƛ̜/U7zO?͜EIAgA<3'Z$'s~;9_#12}Ib>wlw;xZ=֏o!6c-)yuDI"rd_€Mykv9j N,S`uK ܅rbxۺ%_tDh]~v*UژHI딽m[Tq4SsPIH Ly/Y_P Ǯu]ʝ T2A0Le&#ΰuz"!m_j{ eD4ORudt}vP.şJ_^4 >w#W {{F, a]GsK4KKvHfN_O-^U:Ehϵ1sVZ _ms4"fwL^%_ҕD֋ŲW@;¹5'{lL⠔BB_B\ '@<%oz ka]nYoXt;JX4Q&a3vgsa SFpzH6;Ųh=U|=GhmiMc)e:`> 5Ņbc/.N}mV}WX>\qiAiA- tuT\.^Jfݔ!ha=nt$ t_]k,^w'b1K‰$*/ŽʮB#z\? 2E+8p{xہYk8$a/G\=3;)E. vqg", Ҝ9Nt1R:X ?ۯwmWzW/^oo9w_o/Waן}w7>}??x?y?o}˻|+o>?}~m?~g~ß.Jq~߿S>l?{釿 ?~?Ç7u~w?y{{nB zO꟞/oaLpRu*9w{Mدbwj?\F&uw&1/pEUQl`>wrщ ׉bKKs# .5Oޢ8 ^-JrpNbzh}b*L!Ņ/ˉ/4\w`Ǡ`󒟎hG9t~VG҃Vl *# ڱ^@r+.r y\/׭OG;WT.HX+q]>蹫絲IԕV,H[dFǫA.)ES>{^r O.ps[-_;w{y\7 25)6I,RexυT.M+[c5NnG%vÅVq@(`I`IVx~;!_Tn8*7- xGU_"\| Btwײ)KTg=xd\Yre=H)Nkë\ ZeHh{2{\ݫd.#Y.gq e˃jWFhݫnƒ{WPv(`s}d؟BVO<ܥMJ戂ջ,/ڸ[%6zI 9X'͢H`}V;j&ĎMF4_MZA}LcxK{mw{e}enV"EԷ E 9mĝtu@?%/:$ޠRQudщӠSUnl]iH'\Q@&D["kwVGGE5؀hۡ/<4( Ewu#sMEɌE]F772̳ Jyd*Hsm]}]mNf&22a;[|STK74qOZ$\vI#8'Ӷ9Yz YW$'o~Jâ.9~6 ![ a%#X"2\zEaʺ٤nSGm 'O֭G9o<4U88f7Vo)JT{RU_)Eu|E(U#z@]](hW(՞}wr3g)Qo%!bw1T hI(1%Kk7sc:ʝwdp#q%uE1>"Eś;.ȡ` Tnygdݟ߿ݧ7W}|ӏ?{nF~$ӾiBn*D?YFȀ+eث/T6vv]OCQ˃vΧA8xV?G8 ;n=jYasG.5)StP=Pgt~6 O4B~l)rL áf?ci7A=o.x9B;3w vܷEpL:BFbB9<(c@ٹ{+$y0uS&^<7>w]ۺ&- ys(| ͒tvCu<05 }&%Zߏ0$3K:{ t`޺ON9װݵLb<s ݃4Uc7tԣFɃ%^ᆳփ0ڣGi#o{~3̑)#+~y^4<~[ۏ,a]~L糮\R3Wu65+S,ܕ 1`fR}Χ 4+4vu(S嘗Yjzڂ}dvQ^б#I8mDkHM+SX 毟P<ۯO?8k./W쨥WRHYi@2ؽܪۯGWt=*RAvWH\؆wH'u;6ڷ_cXDkKUco:@rYPG$FT*iiR_ڂ5$\+sDuL[ݣ֒QMN뭴Uf' ZLѢMX3ս6JCe0**AG dGNXX*&=Y_|IIFG,&\JB(S5)x J1IA:_J#It؊YGCMgSJP6k|Iy&ǷL )Y|'qsD՜A"'Kpu)LN':kWX['r~J!$GY^x`"Sp:TB"ݐlJutVtfDqεGXy+\Ah |!$w`DIBTJ% z"Յ]eCdo;&KՄa?q"X)|?0Ux8q'uLw_IE55PTr( Ga\IR'%'oDeC=Kp oV#skma^@"orNtDtatEl{!uVf, ϐ1kżo?жq%mn")ub׆HPU=pǂ K%}9>83FP4HJ澞q5_)G͆0!z+ۑFdֵ˨,zY ;6E,Kӗc3^ږyjqP!k 3(`!  %pĖG=@{Pc\e`i 2z82 ~d: 0͏RH|ZNOH6*>@"+IT] fT&V&p+^C2w(Z%֎jU+Y[C`BF"])1`&DeU;#GE[% oIj6*X1 J' o{#-T<l'%rCH0!k ڈP崞$23vt2ΎCD&.ւ< z1A?fŽjfX8(R=lX;zU1~/Ֆ:4F;A\E O)jbc۴%#$dj1Cek۸Iy#bti$K]lK9*5wLSV;ф{ 5eTUGf>.yʩfYߵM[Z+h8=f9Q9LCq%718`_t< !G 9BtlNZ d-f¸,qFp&[5љJqTPD=d Z>sF04 FEN3* e4FB[R_fh_J ݕw)*IEVO0r99FI]3Om ۬H;6$YjADQd`9RH+*9&MO()%AC?P%/j&c\V\}2wP 4R\ph3Srd2*@-PpEMcqZ s-d uEY sy>rHbgH0<AKW! `i*ej5ryIfq gV { /)y!S0D^J6b<~B:sg S'UÚ$łjYm;"TGF_ĮS.sUÉG"<(Sv+"QQV-DU &5sD=n 0{}TQ=`dNɱS_UߩM5)H u68Xh$<eK]&>|k|bot>CՆ!3nń`a JxAW "Gsmc "\0Ev!nz+ Hi6܁)MLfu*P%e.H+F\0<F 1=@B5 YP#Р:^w k暦dMT^ nHB:4:k߸_?# [g9 l>3f15ê3É5odENh9gwڇFe8 3ZP)dFK\pv6 7/(w>Vц?岌`F@#(lzo΋ M#z$>ǐ'59: JvK!hR^F Tuĺi"sE*(V:%zBߤdF^FFQ-V0hj !s Xh2pUvA_'E ӏo|( 4HS-Yd>1(wm5ߒ$ـ*OsP(4 ܦPTV 2k'! ˍ?~e1/a%H%Tї 2h0E| # 3O4ŪJi P'N֪`RT !"%$}Vz e>h]T"wY(^bo~Fy(Dd4k. [+3?4AMIҨ>RF_u $Q=!? cZb5͖DMd!k1!հfF9:ZFWՉ< HYI2~#|{b c `P:K`a4_(hvt%l-)ǢN< 6LyJa9Vu[ PP^Nיz:(P P5݌&,ZkAg8#a,麂rg/2MUp8!d u98F.dYYn,u0r!WԆj5 $ʅ:u'ݖ+ټPxhd}NJWT"S+$֝:?G8YHug=9 _ B !yM鯨Q12PugWjK}o ~5Ky|~S 7ɴ!"`G/v8+ 15YHa`3!#Zl3]Lx}0͌ #MeG?qNqu-`jD(gҳ:#"MKK۹W#('Wdh `.gl9SQbGH}Жh|`>i\<[i$P]P \9]~C\{e b ֖'zX-PqUAQ#( bI1WQJ7xRt!'о8}ew>)kѨ&U6琉tߪ,IJk BEv,W+(d'A'u)Cs4T%cK9@vȭ+ho(͐RYg;c f/(IVʦ&&kiC.c32$#'2Q5\ 2O8;):~MTur p4;iuB)6*]_E/WՇ/D>!ՠ62Y;4"Vy3`O'H], 3VM[`zDR䨰H6_jP~H bXOMW`$pSP٪58u Hڔj@&͐ بcZE[݋>Dc] b 0. 0 \2"!JіC/=@KС];3Rp#kʎ:ktڰEp`1p71:e#@gf3t: yY_L %ro0tR M! ! DꓓqJ<&vRXmI֊€/nKHv"utZdB4Gg13A 875Oy~JC8lI@驰MB n?u޴iO3OAzPœ%;8}qd ,>%4'Ƭ5 GF ~أ4=Nmj(|je5!4yD&;P_>$;5I t\/zlw wp;݌/^%!T-q8~iԟ/xy'Ǯ|@.[pԪEPʾ ʀ*c[(W'm6"c`Z8# ݎ!F n"i 1MqXEt:(xrP@"KI[kr^U䴤SiSj< FX)Wk/<ݴhoغzSdOOeHS,II ,[KoXAOuɾ%BKCQ$#e1Sȷ9IR&}PJbhb[F2EiGRl6)ω˶1WWMu$t~tO^9N-~G$xD%[A=O 1"pY3! &+ ARq#ty$hӗJZm<ұ+jd_EaQ*q̕UI?;; Ϩ 57%`bH A0jOZk>;y{r'c. ZT# l@)JӪ'b v̓ r>AJd2c$SAu$sD:ؐgė [RD(SGM)'w΅@( &*Ѯp핔4?9hm*HhM#q(}xP$:'6w9BHP5u|gӷbVwQ*UmJ2<(#b:P4X6Qa>MZ:)\55&,)ȩ{Jfuf\~DC1P%cs:mV(w~2-={ɯ"J.ڍs #3VNQUOwqq'ɾ{a)KSϭ4a^3q!Wz)10j!y:N @36VuwϘ "E7ڰ8D5 ʣzȗCЯƱT܍Ne18O0-d@MM4%v3o5F;8Bfl[1?#)& '0sI(&p;n Q^Kn֬^Ihf__(uĀp),hj-Qf(E;^^IRs14%q 6r'=S jj`rnY2KI"-Wd[t#ve6J6+MEܾKe |&!L *y[Z O\WAS7Rg[W>paO}eB_??mM ?+wE~Ex?sogo6#psneGǟ{׿çor.߼_=ΰ=ɅڀT;@Px:18 r |}H}Bqz$BL'LO[a88Je_( )_HbRiɯK(|}!y5q2$CU ?ڀf:7dO@} 5] j_yhb1ϛjJ3-ӒGv,A~XclLYx_fd8?S4+/w8mQV3$3[@ ?bTdlaAcZ5kvyu.YCBv~HO|*?0GV7.FzT {[v$Q}vA'& D3DrJ/ |,\H4 |0\C^@ه/a(̙m` L],K?dyp<8?x4ATyi93N$3gyϳmФg\LxF< ãLtb##'+@NQ8-\2$h Y&㎰or# ̤SO(16 H$_jqڲeǮ_^@?S8JlsEtfBcf!i8G [xؗe;K4l392ux F$+ mM %]ivhA%? $8WڳG}g{ y8^ Lb<adTqO%ч,ږ=V0S2JL鱜K{(Cx(1jgan9_[2 &͇ yS#Kem'|:C}XpA?4A%1X䱤ss$}zNBGSOexƓ1*فkϤ:{쯿zW__zūW_@^z_%r.sϽU.Ƿ_ d}w|FDOO?Zn9GӇ|j,‚Fr@#FG=M{/= -u.kO7$zVɞ ϰ >>O1muOM Z%".˜=.vdؘ .Kү#H ᄂuLدMK5[V3qX )l~UHy?&/b~]MAڎ۸=/ƨ 5mEoWldVѓW]5ٱsc +=h3/6Xn>W0F{*$_s><+ra+_6_S:9)/ M.v_lIq0,32{0G_j|zU'm]Me&x/Hb'0WR=4yjЈFCGjY /-n47-mћޛgW.dǏ{;\7X9ˊG. qe{fhhv[865%cNK .ŵ/Ĩ%A c>"Su;b|ނ%o}S<,yy:ZEl(ji`fˁ6u::l+xi=C#(p9 h]Iq'PlnΡ_MW6hx)SD:!Ws HŇ\Scl'eӱ@?>kSZX%1%5!HǵMfTu@ wQ";ѹDꢚ(W !YɸnU'S~ۛcMnx;ǷK+_V2Ns63=&~έYe ݞ,64,;(;^XW^|/>)HY63J ޙE1dqEu,tb]ݫ8T/ԋڇ压Nw$+Ag`lXYɡ CuIjsН7}i(9ϡĠ$tnou_MvL[IsăG4O%{qyڵBt5HKu;?7G*a}yS*G׽epvX>Y`U9΍:l\kum $;\v߅u o4-wdw\]ս혯=kvALloC?+m*(qJzq(=39D*(R8nJTD:ySxB+ncex\V:&v/<;;`}`}8n "<9)%Fjo(4WV [DJܪ$Hrqx3]^JŕUwiO\Џ;_fה1 &M:opTGINg BC=}k]Ǎg`qP+hJZ#:@S\d=O}uDt*"?Uk{w@?tnG~t7|~af.:: \gM2}wnn6wrc?&|K xyH?!*y|KG.uKNN8uQu~.iW<]}~y<ٸ3W<(ϴ(88K?[Ez@ B˻˅JV O^!ނ-oOr-sMSe  e8=~K=yMf. }2LwFC. ۩*^&{D,`<8uTe ɴ |8\֫_0ޤxIFgq ⺲:g'וoMƹm ,Psl^<Яe\:x 2țDc%DOtMwBy0hL?;)!A3OsxZM3)c_LٞEF),?N8b#D(>G'z$=-INd]%4uOh^9[yZ]m]ìD<3I )p [lxL|M[*My?? @v6c%fֺloˮ0.kxQ{scXzz9IsXPdSm|چْf ;dFuZvΌ`ɲ~h!뚲ǛflY0h: ߟtq&ë򱟗h*ayu<"`6d Tw}G]L^L<:^,; M hboD `| EÖ5 29^ .. )+?|aeJ.Cmk=b< ފ[KmƿQ*O86J> <1^)יv0?pς6Ayy#d0tNc1m=XOOs9"'N]Cyk!Er֕P㌳j߂L,ˬdKB0C,FǙWIïGˆJ?.vc&Yw3ƵDIQ☢ ^[@$q Ntܱ9ž&`B +: Pz{ˁ9JbV{v,ϛ܃|UOXU/ 1k@068cqx7Mm *NqCxBqL~~8Ѿ ;cz&d:lB jj$^Q[c ,X hZ&=,@$]7ѩS w"eE)&LJv3c o7m(yY~xP -vWp'ę|j1%З%pk}tSJx1N kpBKLQG䣳1y`=8Ot՗/^xW^z+^lćqB^s!A߾\g7_ɜy?NKh$ ]8HJ'P{E b1M.{kwGco'hZY NF[%Ljxt0@6}-z[\&)2NC5[}Z?tn.12tƞD :21ڢ4X &@n)"wEQeIʜ:!pc+jݢS85V҂5`)<]W[ #q.GHD|} 59fނJ- I͚Ts,K9w3+O _(/n9 *>hbBN@Hn*( ߈;"l]l&yJu|) >Wwe^{6׬*&2r_A4{q:݌Mo| <&C֛vБEt[1|ӝ)$,13n:vHETO+-z8z ~2?- #TҪ*^E-bϪAd {)h<ϯvbُ"u 9fHJĸ٥/)j\2^fγÇ!ŐY?oY,"@:;N`H8vu4vTSMJâR ,)?0C1Q53M!8wcP0SENb$q j?mqA66 â ުߦVrHez@"/kc(/Ǿ . lS<<14oB)AFH!^',}F ͇낶3zpKKFƬ鑩ʕu8oal$eѩ!Cˊ6Q+ΣxIP:fxq(j}EHjrplG9UU6܏1X;Oo%xv5ъW4=Lxd6Dܰw5^uU q̪tA <@oTf Z#+*x+-deS>iȼp7f ҲA&~aF|5mP7D!<tЎM Lj Ea(nIJpQ5LFhlQ7F#lk"$0GB`Qn6 Mccq1:\+/mjF :|L"6R/Dd~%`b$KSmmΕѝn=I{pbHZx{َ͉1 $N]xQGv 4d0mk$N ½Gg]}KeA !RM<4_*JO"!$x2MF9l "֠^ xIBAQX҆Bvm!JiQӄIG)Cĥr-J !۶)E\A@o'>ЌhXKfapJd l,q~qO'O"t\vm! xrHYn&_JڊsIRن(1'~C#VG )ba)DTbVG[V[UR@О!z̈́ '6HS 9>Z-55e%"cjDhSOCprMsؤƖˊ\*1pRHxHJitI3H1׽DbL|! N8Ad9ۼFNjglƷ0$*. 5l5uv]! FPMKHA|?n.7޶b m<9sKu;Sw!d a9ĉ 5~xEMGW7. Hk' sJ[?Ն& ͓cNSl M] E\EM*2‚谭0UqK)Qb&{L%EKX0PĥfN,2Ht8 f 4$"_@Lp%!ZolIK!ǃH#)Q4xbhlA"Y"1`ζ|-Kd7PsC4c[q5ou Zi &#Lï"dnCEu1n3L «5Aּ_=5`w8K IMgb5ȴU2ВxG/BH`uV6nhQh+Q5@$1ubjʊjkD]ϛEN}eO* pV n+ &PtacXL|F'%evʥ2=DV$mEv-@iggZ:Z,Ӳnw1W-%FXʖ3[ɴ^8tk)P]p$^@D0:![JO$7tUX䐢gKl\f›G Q] b{ @(Vz<X -n-lQRjjPHLc#;^~Q6'A#PA;ͷ;~<&'HdΆqniu9 zAƶv N1!At B9<\g\]یpqvWl썯D6Ci@֪ٝy[NhMxReMyɂpBk;R}!\.1U^0@>Pjt/+r2 }>, H2d6cʦMZc|U)~ Ec2a2acy~DcǶýxT6@jdوa]4J 1g1g,g{q3IF* chu|>nxV9=ic𓷘 =owC @,` ]'SRS A[VNBf1P0@Wi9kRxPG pd<Jv4NauVT:] ղU/s/ab O-~0-P ls6Ip]sk8(}EkXΦ}30Jр D-RuKD.I.4-z u y[*w4!{1NR|AR{IW̜ 3p~wpK\aYrfiv J"i= gXDem)tnTpKso'6eu |tBS:bEC` j=$xK|grraV-u|8N1=LZ9׵SQ7װ6\98'ʪ{I, R3 d-bk`a9#Ϊe, n0(;r5$ >հg* F;FKw}*(\{?LgِM[n8&"kvwA8U1ZW6>{ĻO'&O.V܈a,` Th@&s%a+5>h[h6B왉~"0ƾ[ P-˦*R?BKBh-wPPm(A-ޕ K2 bd@6I_o71Ảtʠ-3@`DQߑi={[- 'cdĸVu-6(vGGRwt8l!aS̬YH]Tg;>Vr`B ]JJ†96O }8gVa[qd:y+pLZp|K˖Ó5a=[SָaC>`9@HlN@ 5b#ydvXp 6u.UAz${A1Y6HE(CpAU5$StO o(:9T;Gq5@2羞mZ+B7X(oZ*13NE`fs]:DP+cM0;*:Ufeg!trX-^36wҫ*C1pf,<5_?("zFk"|+\9'j}95 q-_߼{_ 1K_~×_o߼ EC_Շn/ݫCOMw>5^~?޽ӗo߼۷_W_O>|NM7oۛ?~/3/Oy7_oo_g7Dt麩=n)|ؙ1%6E/4YjlJ:zn0?n:zѝJcy5}ˀ!mԜa),Ek1y%UZYX6Lٽni)-^;zK!yzBB7{1?.ctV?+VkiRo'.fah.N=c.hdΩsxٔ&Sx<3ԭZT fiX:U[Nz+/YDz)ua;%r8ZXԺm%'˶f0ǻQp2(fweYǒcJ*.%)ϸ[<9DWIn+3gzzi#ZN}":dѯRm֦_pFI'Nb$Rt\';xMkO4qUޞ=^28KCÊr﵄c=45^pvЬbkql(l)fOJLFNϽ<#1ZNsPD0eRX^=lڱ)ih]G&ПdH,xdBn5;c4%XOf:Scv-WIX'1̇"7yZ{^ L-lܲGeQ:|:Qo~pJIsq:9!Y!Y>aV4hw$»Lμ͠xc67km/(]]]tBLtN *ۥǑ d٧ӛrEco3~mJ*7XsbuG@Ynb,jI!35;$qwnn]+Sw;S766!%ƀF5@9{ctm^yyq`^ gb~n;%7-mHL6xl#;m7 6|^(FcyYӥ]`\B@E-ti}- V1;cI!{$; }>4ovbBPb,vKGp޾VWF9xjd$?L`0 Y(y:u"ۿ~qw(?OÇ'~ۯ^ΠhlOywo~xW}wou`Qf2߾"%foi?^||@n *ܶ༞FKj7Pm1:Hx|!>Ln7H7Qf*Dr"vUJKAӳ Jw>Ke?LZ7:KbRócʩ7?WQ6`m|C+|E>萮̒n QLujpM jF>OLk/IO9O(To9C021"4`7 \ QMmՃ I-c\ CfxA4TPdT0dB*Trop,甩KcRĨk*FJ!1 DSFf n^0u6ZELA*soO*B'䨇]I?j$r,֎T(Tҹ%Y cP}1#hSꘟi Qe%#2}ͣ9oʞܓeY SɦѼ532XO gkKkczv̵ɦ.j;ͤ/)V7:{bo҉qEu#&)y:'v3IwOAӌI^9 E/IRo. q"z}z*um` (n,Wش\s4]<8LYn(g4tW }^UC${lҔyE;z:6Q"?;JƩ=m'pq%}M,jBJTgYwsئ1^-31~j5+|"Gy>#J2lI| }\!=<Э m62@:\+asm^,p-t ҕuE;UGJ]sep+~WMǧIbh& `̻eڷc>jg<qN *ڠi޸ܫ Iq]N馹{i:󐥆օM&[ ]"[ХLK`jqZgOBn# pndKkN+? }]zE43'.EpZR ].J+cmt]LźL7/C0tCxeH W$ Wh! 9aSvB=[QQHp^zy||47@>Nj\Upr Ynط3aP|v`/pcna5Bpc)R'5g= '9@ˏ^~(ˍ⢛ u}}Wr|/m'Vz{BlUНeN_xV>n=M|dҡ6] }zjJ4U.7w< 9˸1TN0t #Ё/'g Ryucn$=;f)©9h0MKm+TEHx+Re յLx pmF\-Op-Zف<ְ+xʚ;rkMUݕp^VVdcgVjʼKJι#(%RlU5"4 dH __ nqBNE$%>t0lbbr;) Wh^HoпQ֚$QYk=DL/v[}⫨D|!O ͵F4fem٩c~+6Hzׂ$=q=p[@dj-iJPyTJ"gl?O.xwФ_--ujm.5ciSp;O7sל~j2.HlZte_و "Nn!':U'5+DZf/$Q +P5Su'dXMDbrU[3  io=^Īͺ?͂,̐0]{HF`L+DS]XcrݵA9*H&T39Unxe~@ɥbtFu-B!j6Dz#J]>>Ϩт<1>`N-vBsdžcVW݋)vF;Z֩'j1M )nƘpҢڴ[0~E#%[5s=V;)i)t%ugW)4\L Jʑ^; UoP(Z](4 cXI%fw2qe:IBfmh*m1bWaiDQee++M-ƍboz#ƄD"{E6%('r* +Bq`n/!ջ:-^WDvXÐq 5Ц&2Hk&ߒ藢Fb~rh1ЃiX [C-8&P&(/DƦ{(WcPϲoeu<'EȇdbjmZ4EGjPoÊUc(FwU9s=7X03 y#5ԓz? IJ>4 W |7Kv}+|0, #j(jHZnruL}*xg運Qx,E=X`j2G1"<~Z(F@UEjhQ*.#@3^%HϷ2*q՞1\siz=&v׮Ɗf~Y]0˘!lP6<6~h8HpK5@9Wѭ8qDFnd%QLg3=7VIK*=HѷqſcgRc=9OӦ* *-[oz+VͽTYMx!1- ?xEBs %LZ8Js<Ys{&Nڠp@I[WueC_ҨG-NRd!bڍQKE07I,5h_K|ƢeP[(mhWg)WÆG6CuXn% y2g"9%庂i Զ~`|j)U~:tm;m뤫,M6m+ɘܽ͒ (̈$'=36XI&֥ё: UOcwU`nf))ɮse]R"m_6´ g'J" t#r3p$y TQӾd,}hEM r(|Y>H0{8.@a^ Ew- @wSi0".[si٭g!gQG=\:RgTOr!G|m_KH R*xSYEjH&uTz-OZ FVڃՏT{-Ra2@d p134khR{|VQ3B_c CQm(-vb!FiϬ1m.RK?bj9IG\HG&FxI#i"ًH!D=-00@q p>%$d ri1Uv>xm~!=,ŋ^=}Y}}STrsyyKMznz}yȞBYz)ry*>j;-v9|9ﭥU>?^.R/-~qgY-{q ._ȷg^Z2vP*7놥3V6qW{3L1T,_:b I';k?n)Iq[G ik6h'W' oii+g PmEgwFSKf y{ ʾ4չ+8fE=wDŽ/99;~_L4\2쵧x4{"JskZv ";4gtx !<܏|*L*;V幞(`z. ȬoD|ƒcB`7RIkZ)u1B;:%?G:H<3 =6۫x1K4pNΜ_r{3y I "z`/=BV)O䬜{.x0OENyG&S'Q\0*qCaQݎ,6j|<5vކ-tϫ2U_#%~Ƀ3IU 萅ƅ_RJ6?Ws#S<RWWN%zn7A#F~<ېp?ڧi;M 4_Q2ރtAB?r1uXOwʯ|E5~bF[x?jb}MpS~w~C5Wuv{>tXndmsEāؾXUmhMYw[KѾsK\h-\jRmmt>)|ZlSH`&3ʢϷ߿Ͽ~qK/Iw*?{UtHUjls am.r63|XShX{!P#MAq|)<#ds#iTy*Vp 2PrFXklR眯9 u󬀢~f2j}i>hn0_-,,, Zόr\[Dbb/9tUyt*ӁBbheBC_1}YF`hS=jZeZ}@<@|X ]קًrroʂgʂ} \{M_P H+x'> 7Y}$_’ 95i`!/"u:;IxG|*gEŇO!/JoAz-'Đ^zxZ! Z1)uq-MJsSvg"8xh+ *z n1<5eM  /<\$X 7uG.Z% sYW)dZ!l_}& O@'+ȵ} hePV(2@W2g|ׯš]fPxBbe}@p; "D*. S9.JTJƔ%i]GtߘCxFC&1e~6%qlW( H)bSh$Z=pq'\Z$Ҡ2g)MVRM%9U?$O. ш<U{HW@!lhM l" Uܐy@qW5XrH`,B]-RP'ܙZэQi՜ȗ,/$(j'hW(6 I@}s4[ug!+hnJ`XGÂ漣 ;Jy`gZpqX 6!lkQ* 0Is]k/B1Uu( ԓQTB HGEwZ~T8$X:!Ty.o9߾}W?Ghyt>џ~d''||޿ǻ~}_2(qo_?7{Y}U/o..hmX*G9/_LJKx]c᝽/7_?zË}X|o/~~7޾׸ o} ~pݻ^7/o޾כϽ]N?~}ᷓ|>Y?/ݍwbY=y/_}/_CIjrq]._*wx]]eɸW[78zQ"QKxaz@qe~G/Q7sMpy\@/Rȼ/(`뮒xg!B⩡ݵpBr){)<^.GZҦt쿥o9;j6#BkpɮsLJ울tM8^ͻB,\:!NZ:>Rݞ'gYA!B~q_ ʵg>;間aAk%cp*?%LC!Q\Ҁ\>Dx^:/ SE/|GBᰑ_Yd EuTH +&4 ^Ս4pa'^](H*̯ǦwU]%6EH[DL_x Aⱡ ~8bQr<W $B_fQj 'XQ].2L4S5mntFmE:+MqLJ ze+`졜KO1y㣌6 =ݺe~nr_8d:{颳fl'ݞdM:Hx? D 6sG#0 axN^2E.63 L3k/ҷb B}.JSA'x#6΄iCBI۞afWIE|E6dd'DTдG,[IJr*?ᬹ@vW HAٖM>Qn#?cCdKr:rxbɱB^oKZ; W(H eH0 ( E*b<,UU&,再1 l- w4%9J12iFXWP 2NIXFJa)H5Ư ojf %L¢Lp6G\v5TKDhvt:Ԏjgk'#Whkv @Qv wj#Hh>U`q/p05K4-hF)H:^yq] 1D II_D|3pK:ö\ >dU3Oˬ趨ZGJ y!"'X"\nnڛcK16F_UTwhjK(CGcf5DK*Zz겮Lm,l(ۻ 6n \'aŸӻހ_/}O[ۿրߝD,)b@?7Qo^|7~|N> y7W!K,CTH!)۪EDY "6#.ZXVs8}?#c##`qA0IqbCߊeŌIA$ 䶑$yԘb9&>snd hHrMn=30ÏC*1lGI2+wo3[U+B)e{A{--nDQ[>ENn0T0G<7|>~4uh Y%Og&2BB1Q76~F?Q1#QDP5J'i'M4S߅<2gr9 G.(ZXC$tܜɰ5ӔF"`%<`"1kfK2TH&U2_W3$|-X'2}B9$6!JGl I^ym6cyekBnH0euɫtg* |+g6gd#CTat܇"& SP/$ՙT2*]O% =d"iIbCL;97s=Q8\NqJD&[Ch'N@isʛ|y9M?'7b*A_,%FE6|QNT8j5 ԇ?ST@+U |a7\isT֒Ȑᧆ!.](t(S8نEB\0^9b' Pţ|ѺSgwd'~O@q 778┈ICιhQs mKIQD;-Dc I(3?Ei-XMaE8k'DpԚ!XRUdž6Y œAu/>FIB~=CTdYoSZVrحMz2aM1}#?7yE3r=ɔ%n ,e@`vOEqPD$W\c~K: M0]nrWi/|}&&Iq++'CnbF/ªX-L]KJ\u2JU]hQK$,9/i!m3k #%٩C DI! Nf`)+O֢)]8= |S&wʒ=ײ]H,ł4N#8!R4PYw!7Pv9b>⤡ HСx1Їrn^n YX<-}T@g*4ʄloʆA.[reS$Aɦ0Ø ޥCVFh%ytͰ]7u0$-VKJ *LG)r\=lW%ߗCRf EgVk>ö&E-š.rg|P@OW$#ǻ͎uH@,[!,8GuIK"$7R%9VĝYIMD Rō!bBe Y"PیPPTѺg6( ͡te:0q)T+@aٜ)rVo.T yi vH,mj8` !o›#e +c2'Gc<4q7lU["াU_nI$I*VUOP̗>U?+j.Ya.$rKMVdhA {q MWXI}{˞x&I@+Q Ho'CU1fzmC ) ,F@ZM8"9!r.oZQ*ݰ8ȡ ǍiPy@% Cz Y-䣒2fehf#Nl LURgÕan4ykk~Noc7/l+::\Qf$M[ eî!#]}峀P`=]`[~Rϡ3X)x҅! O5!!Eyr1wD\V7ܓA˩j `rZ+\m awow|(1o7M2<ܤp__~]&.qb~//XnbMA_={d 85)A(A y fHMdʹoS+Nft[Mʒ< kƤBHM(Xۉ:tԛlmMs:A+ER? ]>PX 5F|151RھJ͝ ?Λ: j;nzMH6m'G̗PSc[uR@m~W~VREeq^άjFX=uT7}УC]rout'!lP8u۝1mɻpbx028#()zBǔ|;лkI=$B]y^)=)nOCɭB\ia}5k2!)LG5ZiC:΄:.\Ke jꉔRZm8^&+$TLf"zi1*e\.cEOq73i dy hNĔm'~zZ4wRocGY.{|i,䱌3_g-pEQ#s9døitp6H X5SiY3N茁`Ԅ M/y-Ř^CT%Ƹ:͇? mWjc-0cZj-U$LIU\jɔ4'w>i3;>'*xxP\֡alӮQsQhXrNG`ΙHuTPfTǀ-nyk;@[f1S8FMg "ќ;^^DD qP}Ą@38"s+-kۇq4|Kbz P"F5CΕ_ЌsElXГ3oS]5,;3B$ȑvy(`U[H=l*vؾ}fD!}hc(M &_>m ja}~?t/S$|˱v,VA{(8RzGPD?^FP_?ci(wK?G0|K $`N]3lll˸r6@FAvh)D[[1G^;29P.UBS~ F_7 Uؔ8C͘fA4LUG2EuD1nOQBa44LG$*[1=:߰ -R) J*\f:ʕ7t!ަ2٠>k"xi %{pFUJ_:yB?Re,31hr3{>. ^8HBF9*YCUY Pc0`A2@y-dS\ZG:<I2xOPENKۉ%orBKR48@" #2u#\?ĝmC:%n eL,Kz`s`3N!_ޑqỷ<ܱY@+lMM.4Ί1K Ϡ#(M+z E0QM#D4ds&̵#u T WNړS r-Rtev}ՍF]TVDtW!vaђA :{POضWj#=2vT3ȢjR)+0Ytmr7XPpNHKͤլ8U9d4n;_ ]Y@$nh N zuDDURuS՛nf L'58 &{X b0Rf3BV,VT3Y#TF.-J!+DC`y)ή5ݥ `ZJkJGd &Ĝ):`C噵2xzS A_h"lµM8kF6ɲ'Q"B%ڬzT#S"tƛB^uJam}tZh6\G/ΐ6.w1槓:`V9fe+{{l#iz,-$nO^ץ@AsBdH\-2cdfBN0s)AM?fu)%0-KNq0h')4\sarvn*9/8xOyݫ]26 R]֢)ek[,aj,w>tm!Mi<t&W/5y:̨f:G=&yA#KX2i$]1e蝺J;]._Mɇ|8.{Mm?y `Ogyӂ={Zv0تPӬd $ߦj -wJ*` 3Nl$09\uXew͌ZM½ܯ A̘Vh$z_aESMP)r+8;BG?pT`S~X:X },wgAYnT1e3QO!dk_orsiSGk ݰ]*F%jzy# rJ^inWRW9`%wJ^QPk_`ܤMh4Ցv)8?XlF]ʣ7qݮYDq6 NCvC71hlK6^a}Z4=_/HSKIn2,\ we N߀p}bOt_dHĜU]5Ú;C2j8^_ˆ{e{:ߩmNnƳٳK*ָ;abZtvej|ؿII3sNUּJ*B03ktD SŁUߓvPϻWwΦjpy 26jznv6M6@Z$Z+ޜhNc폙a͆$!ݸ̱xS!yP~*lUkRRc1ܩ,6dסPc5 { Zjv:CfD)/=Yߚx{eSY|yF:b{h\tnzt߂"(>,Cf%s {*9J ѐۊIIqT{DE<܋=x(*ňԙj{{lDyy xm, ZPɴaђ [w#?}h t7$x'K,5;S(NÀ7hZ9K 9< 1/diRsNrGs>6{6Rrk$"[˼6C^[AرЭ>V*kPh%+y}\kE)k:쩺6ߦ)_hm\ⒹMS2Rs݄ҚX+p[3h$;#66NN2ٚ˙U_kg妓W`i *xxY0Ki.9p5ù)D|u_ɨmXLrVaQWGNcNd˫}bвR R$Q+JqeucYe04rv*J7ٸuTJd-O3mݬ2M.<;/&Ec%Y=(T|Y 2䛼Gim0V DЏi",~*U:S'ep8F7*G*.Q"]y̱z"(h3eK3К9?%57f&fɿ^fN%mNT 9Y.D ehb圎y!ƫ50OhL2?4ZemM_UV[)Ӳ *62hƫ ^ {ww-?}xo܌OmomW)7~|M__58{xFVӯ4ӦКɢhɀ(kbk~h;,̈́vNw7NOe aRv(COq^QKO$/3ȍ _, -<LN\ eѸh+&k7z6"|^L7-R32m#VP$p, LoRk]m}bg¨I*6JE}@FXLHg8v>b1AouL8~$;$zIb6x5ys"!^}Ҏ]lYE)53EӆRg *րjT4 iIژOf*9Ob}[A&DBeoKAadeX 3Ѕ*5ô[DGZ֡ W$,ia9-YM{>NB j]4}E7VF0)]t!9`$"GR.:y2AtӇ)jT+ DP"u9Reg;xٿZ =@#Q#)#RP#Gq؜c3 Lo;i .@="N bSPL$ңTe{eBH*' | բM6J/Ftt{P n%\; 4)v\i1X0 YfsYeB r"lO[1mɢE"IBP o6SQ*=!6lnԙlŁ"~ׂkqq,% ,,BbŮ c:f)\l#84V١Zb]6sV_ R2XN,&$ӠVT§d񅭜.h3l4q UTmq'҉W+>Q 1inV\F'q)-0~j|d НH^$<4xi Ȟ|u@cA8o7>r-l;6t639!,hh_tb;72Ea CPd!@!t ple@mQu\ LGCT7&j*Ư*`YmW6QW|5|~ Ep&ҮH0"עVpzP#!4Q;kWC?=x;ihtٙy WzK%BZ/uO^*(hwO&&=w>f;YmRs(O<ѓ1:IC%͇Sxe=%+ ,QeLӣwRʛ:pe14KX> ;$O Xow\SߖjdOR$mWsKRareELlZ y7e$NǠ ӯ5<mSV =k唜T*J_T!w#8K_t-mJ%FD:Kst kqO}E"̪\5 #29%B^|^G̡=A%ΕXr֔fdX0.}!QC] ?I2nf1Opet8jRy-cDt t]uk0'poUu,_ VUCsxQ"V8EA ~< ڠ!ɐr9uZy]8njP*O簕ڵ xVyHl n*]lh q})QĄ0L3u2ʊ<\EȧŚ˷_}{2I3v_bѰ Q[D9jFfDךPUbzVT~ȣz0_Xve|L/|>-n\ޯCoٳ+0>Ϲ8\t,Bȯ0\ɛ9{$%9z8m#7ߋpUGG뮚;Lqx|z Jzůu>If\qka{|i)-S)Y-41G]2]Ti&HY磈ŞMt/}Ο!Ƴ5bJN篾Gb0If&x,dҹŷ $<~ӬmS"ajufP%"O딌VV0U7 !~p%cH(dS w6joG*1UAժNi S7Ғm6afš/X|@VYe쩯)-O\-|¡C '(^aFg 0#y5L p@٪Sٌs1[oӌt#Ⱦ#.c%dg0^P7XfV}&1Y= Jݑݘeɺo$d9:d2=CkfR9F^Re$2Lǝ%Cc0MI;}wP&y!xN|6M "\-5%!?x m%@fE FU$i+9R<a, @ yN1L#pȽzN5LWDƀމIRѡȄWxRj9Ld00^zb(#!} f$& 1U<:ȉ$-eu{30L(lP\9 X23G[|M7 2l/3PVu[C# %X`c"2k4U5G ӎIܠCX9%N꧄*ޔNE08OPq4څAYʰPh'[k!FF$l'E"'T 3"m-Q%>9HԹ02Gv*ۚy!^~'|:kv cbi[&Ab'HiK{aa24jqM uiN@ܺ=j%EMbEc6@JУ[h~α ؤ^ڮ+C÷- @9Zs(E0*kaRdٔ噇=FX零/D" D^K9fKA1v`4KX8Z2 &>iP \?]S01i 7X+9*1(2PݮEC'枈fF8P>:Yg-YY秋O?Qٕ_guN RY͛'._ӯh-~|:o/_4W}}pP|߾}?oz?}GHqO?'-fP ^~E kd5FRе<1͕h EƜ> zØeTJ-52'yf'_UcR`be}Y{^u,dG«푂GfSs͍<gB{6Eg:aGӚ ]UnHzfY5 [j^<*LW"6l.'<&qyUd?SYq>gaWA*O;5 fjxPeء9~yr%FvU oʝxJ4)KbdfI<õZdBρ;_c>G1Ce愑Ea7/Nm'xy?Sn[#L#fb@&zO.JۇObkgfE昡f/@M2 Q1rl's ,((ah)ŔbUs|m%sQ]'pLIYi(e !ohVRΚY%E$ͣUsf#J} 9/ ?3Z)KKV= 'Z[Η)0g<|z/jZkN67 ΨP=_gT:Kɧ[P:mfyP ]rUoyg,zTcOJ2Y ҃Mw* -[4=RYʓ ;'#UCY22(&9Vɫ/|25Φ0~+<}nTǃB cӼScՈ ,*:GKbjLu1m`zVIBuޥ&3lcPčz!JQhcRpk0Ԙs˜-U8Aڎ K5y/_oofo>pg)1휞3yH;+_*a޼dž緯\C}o^ΰ/yP|^#0,w_P)9}/KE'CW\q1dAc*.6 >.1i]Cᜤ |xcS"~4zJ@VSC?v⪸#ȴB{p$|B=tɤ~;M{nl_)At9p2\ I4)8DҶkLS}l%}H${ިd}쿽'|:Gl@1Z]47DhQǺx9 g^@)9 /!2Arz;ը\yn:{SHNsk K%Nfs֣ g"'Tq+*xК0 !(^ou2J#!qgC Ҁ.Bو3w@F/e<؋@EfB=Ԣmz"k*EA<9䰾g1k(jA h9yP $ 6 %"')`UYAg]( kHn\i.vbRtblo bkѯW@UJ, 4 M}'O +Օw6[\oDh-abRY:(BWʘ&ϓ^IBՊF"p0%q9B-DwsZQ[PPBY:|0ی1-ːvTiF1'OdM D/a(ŇI$$  a6#Ha(\* *Gj]b䩢%{\󅮂ې 脻7g;#^'vm )YBy~H'6P< SͽjT`qoՕqC jC9o|p6XV%^tDnPyHJ aG1l(qj7oFVUYpﲆf۴F{6Vuv+֣lSXFV+vSP͔lԴm!6b㍛5~UiJeS"<HIU@; !J^);jG!n+-rmQ vyRsҶ~j^Gҫ0D mme1 |FNcD#_GVck2J Y)C&zrnM~T!a;Jz2}FH Ok}}ar#1Ls_5rjzsF})5 VLB3JH6091r$S hwc6Y04vJ_ `-*AUвzid9-ruS ]HC02R2CJֆ22 Ă28 bkj9DH˜R=3nNc`VVc:{J toe F%aKz{)v rwtWQzx_˂!7q6J0Y~{]97@YjBvd}ϲl`p-N*uT#hb!PejsILL@-mp}K9JFkSfˊ|D~!hioN\]]^ݱz ?@II.cb4c{X&\HD0ZᢞZQEGP&{u"xSfP\P'r&Y8|ZAeqLҩ$poo,ǻ?||j:Yw/>\^c"ѐ6nϖqTlnv՘|n1L܋CZZpHs:L#6i]/-6P_V z#} u/ǵת@\]kbѣ{vÀfOfARs+VƆ56Y!z MӡtvpCd~aF,uP q&pC%d*{ әk5Xݕ#I]jԦ.7d&FPj88 q;ٰq(;bUklAs)#)8gTw@F1o2K=8_jᭌ RBF6|!껻*J4z}aet}]jA1bm׷@/7 8+gj|!gIP"׻>Pr1@$х sFv]$672vX)-w~{lCtNyThr,b[r75g`)s3ʖ0nXh|ܷ7c=X53RrpJt{tlV!uff!BU29SP}2Q7 M|9JŠqA- wF\v8.W1*b[E<9 CvյuGFtP?쬲gXIiR(-StiU Mo3^0wo(oރ ]rS+1&jZH\V0b(bJrŭ+nLHm Bj%扗~5;0eZ&b,4'V'һϑ݁;o|o_޿^~۫~Gk4Efϖk7ZJlvuG}=ٗ6k&| Ld P `@6PcoN3mf.mGޯ05*PoغVNK-9ѱ+t<{- (D$/^)&j=؛L+MYVdzK c;6a,ƴG1Hw$%սkdci4ućڢ5JDý<"dh(uRg)ǣ#VzkH YZvϚ:Ng֞~u¯j;y=9z|ڟwh}K\sb x" VGe.P`vRqtd3t5{,^>ЈiW%>h%Yk/%]< ،#z]0[l+8S+aI>{iI c*f f!#$̬Ug[!^Lr(&-s>v&<5=7_%eŪ\9J6>dr;j{]pTxK e*u-N4# Kebbۗw>AK9"FMeK}s, Q4GB2ub L{LAZÌ{'0:/}r.?k҈=S2)gJ qgITAVygi^XR^SK˾3#Jy^%"+TlpvYғ8\&Я (#4P~9": >Ug!#R OF tbXWGeĊTȕf$fx2ԋ({iuxb no!3\"qWNTvh,O>9}Q~hI;yilvڵ^23g]t v3/F 2L̅`2KB{IhW :6&%-M_>1;$_ʹh\/xN_ph2ghz氲jS8)ׇ`Ľ{' ޭtn|w/*- soXX4OXڨ(mc6կy.0Ϭs 93X۲N,N`f0Yzk5SS|] n+&ݙ3r^`t /fTYU9PY;3V~%Iw`}͚쬬쎮hؔ\z:/gM,ybJȬ`v#SrC  *8]Td-%9m$-&Aldm%m;41 831xڿwe[oFvQh}K#0`_MWA;DMsmOn{ݣ-wV΄sZDgU]J}[x ;^QBˣMnXg ή_..Omn !GmwoSB\.e]ELWtz#cҌ0uF qpqrrkagC+zWq͗:>/y roR}׮%FIȉΞMϻRG2?:d˘Tq_Vn֤|K<8pXԄ)>}Y?뙝Ow/bu;q7 3EV%Inzq]W`9EkD9Te}Wd|,fy;%7nYjqչr5ծ7y;S%xwe>$~ vʁ>֭5wU1ș螂v8|(hђ*鷋ڟGwO~V!3KYDˈUH,tHrm͝tϕT._uq{. 7s-թ tkY[ǧXlp"k])}duPٖu3.f~BEIQYʔt.B>?fgW?g 4 j:kǕy?Օ: Ls ~& Ƽ렪ms}k8q}J3reop:Rwutd%:z6*%JUDaѿlr@ñ<i!U EK&_xk /=:TԄb+X/l`[/cb99^j5N+9šjaB(BC*][~S|;O`YV vbkGA+M#A3녁㗬bE6Nlύb뫳g;YϤ8oW|*z9+sgmpSRy_`Y2]u{:-jU<]ȳH2xx=_s\o[}<|ۓN_ ]nuVa7_u>_xm?a /0| 89ӥ#OCZyY,- ֌`D\x= 8r^ ,7yBƊ@qPym?)kLM*8.<0[W :,+<] -a6~\I-?KL@y{K;X&^f^aO`*n?|Ex2;"ʃn`g %dfYj RZx m0Hq'kQ3W@72L(r/ $"4d<`{$vjY_lќo8s=;>.O.c/޴ 7]`$7]LzӑbӖܗU㢧󁩳z`H OƸ.1pJ4lϤct䄁zUpT9,ձpA q"o/m&}vX8:mdcQ9+a .JB+XZhɀ ^L^m5 ᛼uqh_DNO^ˇy?7ooço>}x߾~˛J<ڛ~=ffu]4_.go=޽.,n"__|})Ƌ/]ww޾wS󗟋?o>YϿp&>ɋ?|e/r=/ |×AbIX"6E7A [ n60+U߬hy 2(p2q< GϦi2Gwq& ΌK KK0lp'iꝚU.tGT6p:JE^2h{ ,A=&AhIS-cyiQ1";ie</ h'-5ڄBv&SєX5p@s]4cJmfc S#" 7< )v`PvUZ3 #K8#Gvc+@Go-*oHXQ{ h"~S>n.wfe50.ȴ5^]LxS)Y F1PXU85Ud:x6909$ xt;so>dk=_:$\(1`쬀<Y Ӷ?E ۮ7TJ먲Y9. xo0sW -G& OBe͝)-64"F45|γ6*Exn?q"r(k.kో55IKYl>c+f吐тe,?\N̑[!M.3ś ;T C=ZZG1$;KL6*F$.fs֢b" Uh[$DZFҳYk-MjWV$%5'j>♏zsfpMr tmTX/x uufq[&Z W2ekzYJnB(Ɓ r@GƔ"zk:9υxH sgҒY"c; %[o.KPOk֠ͪCcDaRɩ'˹rT4ڄ,6شs:B.΂@ͭ'*z)y+v x Plc[TA=63oe:WXdPl(0M=geULM"c)duvW<\K!lt2w*Q1)&78_\S]ȷ2^lSJt9۱NaAz v>cx.'!4(vX7 j#$)96kB@|7Gv@ZH >['ж08f,/#&b+kzs)dl">*0PYIXJoFre|vLcekUZ,<6YأPfTkk~ 9x"钮r(t .ڣ$;tgu39(S(ԪR*U ZF@?PHK5f pc7:c_dEyFj s>Vs6DFh̓ӓgOnHV;9o?io55)(krP ß*`_|8}s(%iWkSe ?_~so`ܐg_ܤOxÛۏ?߾}_>ݛOf3?>~ZHY<%H9Z( 4jjq1\$5yq1)8?/Lk{u+zٟ_#Jƥy,-p?(݉ApFt?Nai'M./QOTȜøUt) psFY:@PoP` ay%$%VFcH` ϳ)/}zL/24, yiOÐZAXvp*utlYA52tWd9855;)3\􆬈xQKleL<'av*bP<~GVk58 ɿPЧB=DZSyqH] لwMv/;:^= יCǏ ' '߀@2$_+n(ꫦ`\D έrYD ~\3Pd 2*(&'4_ztnN8=&V˰4W3>SP"yJ#V'^M+\8»B%A⇕<* H,YٕDx]1qEM_l)n0%]6nx,葎l[2TFbF̡ V_CZ HJj,}P%LȆ7f5`*%Zuz/ƦRs(〛ZmZ7JGM $# h=܆R}*Y=`{PsȍOp9[YT851@9!sC6n" 1*:57]Ni@Rk 2x/fAVXjܺ!TJ׬4 $9;` sŠ]aB!џ;N>4mGnﵻdP+bpܪ5@ ݹ@R\ 5^,:\6VCŞRs6?Y@ b5(mC!9 [d LjҒjVkG~pꦧdTSU?}9- B>LR֒F%Ũp"ILFbV*/Fg0 8g$q_ 8q9@UH:9D4 VƟ5ntI߻hj8T:X,TG:bѼұL68>߉=YbBl"4**K'!((n,(DQV⋛ˇӋwu%* ~FůBo$o)SY[H\"{H3n5NU@-Xi6gSo-6pof^S)(ׇɶl?`yeI> +6X@Zô\UH(5IYG%mbG‚ T ڒ223/UvTkHjm*FşL5N$Lu|@Ս24LJ RvrT+^u%- aĎ$yVdwGF/5(5A J@^jmuVifPjJfep/%Y#7"W`iP˷9͓^X+eQW*M5l1gaC bm ٵPJF [1X/>ʟ;OTlE(J 'UdYTj/WOZ|&Q2، c(@돿taWo>},F N y2([WO?ٖx &lJu֘(x5 + K+0d Jj VfDK yypVŬ"E+a5n@j3)u-L‚&yx#QRYe ]p:29]-6#=ˎ,ʊaCn'NUeOp ioS'lŶfOv-jNrAƂ$2{dj/,Xt2*cIM!V&f7(ٳyT5{52%4 f[ia琸3^"fP%v2# Y`ɊO2FM?BseUl+RdceUNYJC+xvJVa b 5ì_Bz=LنUYG~\LC=̼ۡ:524呞ߣ522lg>nf 4aeCѴ`PFNAsЕlwG'ݲ:y. |綛,X}*tWtM"S(~ "WU(;' 4je3"Fp<ڧfJkf ?z3A(dR^i!ɖ'zBaRg=8g#| ́SpL sd30HA\g{*3o(1+F' R$;2F ⻕qt$`92kP).L|l5USݻCO 9Q'x.F0Usc|"i&q$`$1DmՔ[ΰUӚ'Xxlg8ѕan cB=9=8/t8mJ7ڛx{*Ƭ#!}NF)i ԺbT$^dfq=JV!Ǡ@Vd2~]@]jD^0HT)5Kvޑj vMnS9yih5, ~KzonT9Mi_-|P̛4ԅvʮhj:hT5I҇GOxFIr7yA a@!ZRrpEYv&Qa ހ吥^1Nf=*c+Bbӽ5eBt-̫^K TX!m"iuh؍[c.CU慹X]=*+ }x'-nJ@`r {S pm{5P6T;j;TqAzG:i le%D ir^&%9ig[?,!HW^]0[ Ď3)cGB ETU}qX!*-iC=u[W=lޖ@D{jhv0sÒ@r7ܱX;VVtTQ4{WPbu]W[ă!Ryꍔbz䮕B[jқT<b`u+G#Ҟ-P%4~V:SL{b zp>0>XRsj,]),;FYAYsU{!V;,\ګ&QO\q\M;2A^)R4uiPFR:H |UBZҊv|r$" <>/'pR(ȡiwjek[k[B5FfMj}xZkڠ(Yp5%*%;O؈ GL]lp0O28bOxhvZl>?9T?vطn˳z{tRlF;%sk۰3DK\fd1*fHI9dfU{fŝc'>fY<6%{醕e+b ϳ5zzԇǐ*4 @{y=+@׀gũ5+ 2,\jfALVYj1d}2XAmuaWK>1g[͞iU߶ސ,T@pDVAJIېj\rZ:V*Yؐf@ݨ(Ce#&}:Lw)!c=X`r=6\Fj8|[Y0 \5*" o:p]^D |uRk6W.('ǭ"S e*SmTd"JzcAPr *&0oYmY"Ǡq zmbu%֋!߅?=R_N67ӫ+[G$Wk-m{ Q[?i+Ck,7̼z) QiBJKifu':q jC׼Ie rmE9Ф{iW oĖ"I' ~̒P骛yAvX9O[cʚRR>WFvmnGdg덡g>Ohf\IBC9}kg|_78F58h6A:#de]X4d>fRzxW={%e7_juLxRw:ݕ+? fK|`Mu.}{.ۦ:~(]}?$~[|~!o&?O0ǴS;x4p_ 8,:*AN F^p ]W{dMI)śM:Ordق:}-G`?u\oR~z;e!m†ԬdmAQnAƁ;'k0ddu>L_ȜSG-8 ]YVl~!sP@Fj)eg2P@Dxn2y@G'텰a8cBID&-2vCBYz n+%.Ѕthydх|nQ9fV`~? nGUDZ٣jx~/XŞ|?=%8f?#PlѶ?ByYՓp? m3$x|ᢘE P声7*I]eZ 8uti u e(i-7BBgGIk8Q.9{j2%}G1yIʤ+3͋_n< 㯞>ۇݷgo~Ƿ^+=|Ûo߼}x߿=x+#s/ǿ?L|x'_ܟޟ66C~|~'W4]f"o3˚4? 5+h< j-ʐq8,(CG H1W4Nnerw4Su?99U> 9ݵΠ $81뾣Mn1~/ %qYH}`O;4Ve[`|T7P>n8aw=)y, |]d&0 B .43S!4vo!iэC"m[OM[#&^uy ™<8.5>?M9Z*F", n8Mcp~4YK<5ꬼ {П.exk:362 ei|MV ONLsNƥYld-E~8f΁gqW,l/,Ouq`mw<0(ߕ مIII ՆAf;z8 3 PFb}$W)gƬ8SQ2x 5"2(uBǗ|mAasr=. M;i]0hc= s51 {.Ccr,Yڌ [|r{&#oV7̃H:_B>I|oo(#8#JFĚeF$uo=r{'eݣU_ʿJ%d³O.#Da,@4פ!.QA % mv*|R4}1 q+DI|d&@TS઀֬/uK|pϢqo*H45)661K Z&g34ɮJ*D4>.OÈ|Q֎'Y_3, k)VZ ʀt=N~[JWM׆.\~@7[^Եxdnb-H wrdR%*򟊇O5{n)>y _*qt])@Z>W䢹'w4),jR7ZHm(eFl N HQbg,.kqIY\ru:[bz}\H5 0=4\5k_hVV lW˕?M.ڏdbjU]Ӭ65Q74G D5|䶡 _P)wfQY9Z+.z7´:'kY$g.$rAi Guh_^y!g%wRZu5=bV{\_ro>Ӗ7S;|AqK''/qǷ/߿r^ҿǟJRKM?Y!?+W6<o1Ie蚢h>y25x0k`ea"};1Tt0||yѺZ@Le+Z9%W6 : q]Q+gUj[{T[-=QgqFZrRN;!O' RL5X ib Jv V9,԰w`_lT2h(P Տga{-0BPv ⦯O"'8pk_,f(2\CANwŐ^O(+@0ItA0Xq8>%Y`߾&fvFXS1:hc=sǹ@ _uu(>תּ%_rD%4/HypyȚ\l%FmCSq] 59Ł ܧeAE=-,꠫iJ萈1MRp5ùjڞMŊӨw7X-r֥ɬX*Yh1⣁ w0-O61U1kB  MAE:,aB Щ)Vz0C:[1ApEkYKQIJu몶aSHlgͷXvۍf+i*!;X&څ(&E@S&3'zǵkf1)|A /aIvۂdE߿$YËx>7_Y)w*q$nj/1Q7 ` ")[Dk>< X5V` Eqin^?==}u] ڹE'o#5?Jib[~ٗww!»(P}P 7@^*9ll8ɱ-a~O[:RZU"i Ya< #.l97*lxgłQ8Lz5'bOV|*G5tp:(/0~O&L@ v:tg@槾nNWFE_>P e?5"F{ڥP[hXef7+ *;?x˼ }R$ Wݬaf+gQ#`Fl|V+ςW{e&GS =T,!Ŝ Z)Xd,#Secib|h/|ABiJm܂GOS_qi8@3\1%RJ~Ňb.Ntouq9q1Ƅ3G>sC,>rnB`f+DdagR!IK[D*Y kn aFFLV&/5 $?gflPܛMUU0) I@tS`qФ`BH "Xx@BA !.UV'nv3YPF(FkfwB2&k%譌AbUb1pRrsVRWcJ/Vs %[ۡlmB ,Pah@IƢ1ru5 J-+ΥgTނ o< Ʀj{U9`DeF5M>>pmS ڵ"wv<[I`4ܜ0%A+.f o`Ⱥca 6K ! l/4#ƒW7?/Z7} @(-`COᶹXQtځCk6K5XĝǓV S;lݶTubHq62AsfkN:K$ê*X49C6bb1܉%^¦_Zvb!]Heۀ^imf:É l%35GDmd=f36-sz }p$T]9u#OjB8v9F(%wAj[-/ h"ݝXW~(vmcBZܤL9l6Db 1DgY؋r--ƚMbqI xdQ\XBW7"#U5yBIXdÙb`-j^sK ,0@aY1񶜓c)8桗u~g^N&Ann6Q%#gp L*F7h:Ck0r&hs_-sJ&Jzk.]Qs6+zֹfVZLDUtBOL`;iMDrsԺ"Ɉr#R7Dz'/>yѤd&)cVſ$+ϻݍsnVH3G1YeHm(E,I.!=-0>j=~&@z\i#Ca!W]siLAtbnoLd O9v&խ ͭ+gm&/ [~8 QݘoY{dž ܨIE+y%0"'_3q)=0$ -=1$^C6;RmBzN03ݹap)cE5+k^i⾩Oژ}5" L;8S@r2^4_AϗVzF{8(EEnLyvV 5+XHGp!=87֤gVWUB3Jhf| /(Ͱi+E*1o.zAq5<5P+Ěڹ } ;w~Nc2쒽S)-3Z\C3ÒFN:H#~5=zZh a[$C#[$X :MUh*NbtFU >4j fj>g5 Q;>;_θs4ȡpn#%2嶉 nÜ"ւD:v7bmLƒ½0Mgy }J\١6CY{˻m<k͕}%EB`Sۂ̝^wNG[K32f 'lTV u+2|@l,f!.I?i.`{h!Z6O$ l@sOU)Y fzx<Z]]Cce.LJX(_^ksHoUXMKU&k=N/C!V,S*ѽbQS%X`VfA+kfPyC:]ěZJ"WݶcB5i2^A10mBwlS\`xUM;R͂SGsK&ՐRǽ*9 "6R$9Y*-Gh -qN,ͨ6`L+VَڕW3g ^Vu`YVtRcõP5oZ҅M̀D#c}Kjk4[1*ԥ2}2,HqW5JSA"^`F2)82UhkN6“ZŖ$^<͒Q,㲬CKdO}8)u'D,D<^&t *Q$_ m]ªd|\_ 2nz\G=,25\%橞R[yw6~(.Pߎ匫NP[D*Kֈe,2*T% %Z6窊۾Tf0R-LmL!=Ҁ 0YC`^ C4\!X.1JUBr;- 峯~S&9T[ilV>E6^i080JYo[ ^f k` 4MZC&6|XBk<4FH=+<*goՄ^7!-BJBV:|x0`d}V_a4")TUaF  2<nā$ 6?m@*eQ.^LQwtug= h㱕n}5]{3V n& dH=*Ťdpq'W~m%Wsdj7et bT*bH=f_CWcTrT%53ES8G 2p;ЌaՅRi5FIBztQR=+M`r - 7*SG-Ԃxi ;]T~yENS0NIz-{"|O*74Ф1ݺ2k,_ڤT[;\р9vjRetE 7Jm/؊ojr~c ]asV0*m 4&#-!c$t%REuK J}]'+`v:Uu׍ϡ?2#Ӭw}1׶4)*E+tS(t$U[QRjGй4(̶((Z)Z9^םUh_g:eH$S]4Z]xxagJ5=ơp>CUa>G޸C^Cf[b{>~%+Ѐ]Kd Uj+MKݒAy#E:E{&>Aڴ$fWjOLZV5P Mi%iٿVHTe+)tQ@Yq׹6R'M&`3^X!Ɛ0 ,IY{%,ߨɷFͼd;MƾnC_D>C_b[v ȴb{֤olA!hѕB3Ukk-N[+VWiMZ"b"Ԅz 2PVCK|hk1F{ 7^ij(b|ou΂ot 1;jknVtkK_<(F݄C mu^l"Q)sӑ ߓGzK8jZjYE{z%0ݨ46ƦJ)܋3ȳ?cu![ 5)>Pa3M]m!6wR*7 ̤]ZhLPK9 XZ:h&Pe,{3 lj(4<֙ qӕ,崍R-z;Lvlr4;S!R|])4I3k+ uӥLC\n]Lj; Dwv7*bݶ9+o :AFlMOngJY_xiı0UyH$"ՖO>w{ ƅ ћo?{A P-/11tNU( B(xqM04n1qC!nq B=\BC=v#* )=2++okxz vh7( G7,\'tb!DtߒjiKaNT"Ը2=C+ppM&  plv ˌ ).y;'6(t6rrVeSY5ѿn zLY5Z?+sL@YFl#J.;9uicT {ZVKLc+ =J͸%יW 6Eڜ"P aɫ6 WdQVQROΣ e#zSF '2Azf^޲pyFA2DևD{n"m0]kHxtD)B{X #ir%pֈh7ZcK<:x F@ȉ&]x>(i5#RZ P&B@*pLuG'(-oGJ%&_|Vi$䢜gϡPp58xDMdbW4ט*R)WZgQEt av0PAbPGv%]ZGGeCC5LE"X4hkXJRRY|werH j{1m[JS߸XN, RYޫ5"vhyxEeDuZD mV?pfNN_X,Ji ݝ~c#EԔbY )DQ]\s Is=TL{l!WQ l{+3) b(_dQs:rRSrC4)=A'x6q`cB5CFDZNV; =%O[E'q6Ɉbz 4`&vw&YYѶΒl$ 4ٕ[p(U AVrJH=A^BIG ))47CkH"4Yb598ֶxb:,NN$jESIC8cA::GÍT+? _akLTKʁ-+>NmaE|2ґ3tiuiX !P)S4ufGwVظABT,BrY5Dzq ,&P3D('_)i/QaҶ(5U 7vv5ZhQ|\۞а0[sRsd$@zXb1 q8h/d9 [*"_pi$Ut muR9 cĠmAκ!"sNmzgIح**Vc횯.\^˖EX>leٶAmZP<ٍ5%i>e`[JAz"_n?VIF'O^17}W$糿N4:Aǭbm:q6-hDV؎?I~ö㫊OzVvA蒸oJťVM0'`o@8Xr{qFI$HXM70`lbs4›Tؚ${T90ÊiupȡĂS])*}Qz|xl_k0y .ZpbPs,;#,Н ^i ;.Wk˚\M UW̰{(egõ_tnGX^zIY^޸ݱm&ݪ!?3"ԫ5 ƆIV?Z:*OkuA(`rd݌Y5aڎ Ggh^!:]+udbT295#,4M֛#llÚ(zxeKdBڒ _H}A 3osu]I\|%R14,[W\Ժ@=2OʄNB7G~B<=)W@5j4^3l[uDXgޙ΃jTw:; g6#4oJkqJ!U_:|qү4-a"?y{HgWv;u{N'MSX5[® ,a^{0HA},#&jx*}{,9~VOaYGsBؗ?ь{'-݂ٛU(kj?ϐ[ie; WS12uRI9#%Ցvۺşg!M˵0=yᄂLq@zUτ^Q}\PK;jAw!O  b>&4MX]0[GM4xZ/m`Dȯ)Ц2X[ 6$<._C6?=%=??W^Kg~|ӣJ=/߿2&1Һ+㯞>ۇZ O/^ۏo=<9Wۇo>|xmo^Jys~_o?>?ۇ71߼zDDǟ_p kR#jCkodyyRNux5^sy:*AGW]kFBC*][~S|;a,kėQgmH{a`~Ulfe9ctnb]ʊG<{VR?z'eyTgQד{Nף^:\rdu%ߠ­,m|2\n>|<-/M"Y_E>9.!V6 6p5|(7,b?S.`p@ X9U*^>l׫F//d\p]>t6<'xAg^Y*^Xt9y <@7qJY21 ړViVE gu^\gĢVn; [g+LkSSFmOu L F!a5lBO.!]0UajpDvJi 2YF^j4Uc]=a)1㶄{C26~(OʅTY`4XV1AJ ZI: 8ؠ./v7XV-wԱa :I,:u,\ a>IZo(oeg'=ody;o_,bUue<̚5ieX*Y5bSa3!ߠ/TЕX+_l>aA \i]aa[5M\f?23KE4+@6A[G7&qd,iiI7/W}}u9!x4?/? y~/>oWon/z7.kk-~{sëu?! M<˧NO]I^|~ ?~~xӇ7ݿ%߾W}W?wa7}:7{{>wsJwWow__}!>B~_w_MG/^_y// ~WgB1,BE1G@fsNw1?*_ ݏ$l0 i;w]Mc|֤ǸjXUɣ-S71iH0bP@S (4FxJSy08Y6͒)V^i~)v9R|U$e"wʌa9iy 6ŧ25e8l,\JA9YUө')98 (&_?_߿}s~Y>]+\ ?(in_ZjtN*^]MZK/^+,&c3>Yn.U+x$ZR(cTr')v(XLBGaZ~0AMndebȌrvv<*C8V>8QrJGxGI奒fxSc&543Aj]x7.U9Aw 7[bIs @'vc.9A&;5=,xhP4Y5xa銆u`^p1ITJ,J z 38сz0g7vv+ -zvVS1| HN:%iu =pWkgkfLnhq14/i^`E˓ ["+/N'KrQ 7\3gbX 6&ydr]:Y"-fg#a0\f[]^ oYYZxbb*cf ''#˟ NY$cg\a6co JbJhl.*nJ%gctzMl'sʤ;g=\=Y0s"$0 - Cf$]exTQ?* IgZ>nȅ+Pr ֧:x,,xo=)!ABx $KzpH%OJDlɪNg\zeOK+'[0#nVG 8<+8\niQƥ"1q?PԢ|a a kȮ.ݲ:&Y#τR/M٘ٗ0lϫwgO| zbVqY 0(y) y2' |\]gVVc1Bm>:LuW-qUOu]x!\l%ExU߆ `>]|$ .,md&xap:6^LVb¤h w%EuMd-)BKGR|,@q]kwv$p< P{l2YH`yp~MfgS1> z%zD8u+(p%;@- sdBN򭴑AzW1.1rĀ`Zh$U; c +v7ؗ@ GxmEL^DՓ{uӀ.ѰnIVWxa(_`$[}.SIzH&l)g`F)GDQlD:24֪I4`m,$fDML<#ȳs3i7o~w9)-ڊg_xp"!,%ZhyI-a"^|,%Z>⫇^5hB0(@W5J?mʥJƸz0j7gZ 'P,\lz& Qxʴ$G:OJæH,Ou_gXG=յpaŋ}mHO؊A fl#[g}eciuQu.h&X020m  PbA&UxQV*ȠuI՘S'ʢV,^ۇ#LFJ?t?8Q'aT^${[R̎ K̢rǮ%+Ι )>f+yw}pleɦrl;3\|d`=覉L,sO),aSN2Km\hխԔG/s 9F+ٜ OroY Smr,lĔҰƼ1]h ETMjmN-44>=us=9Q* #L[Vi(YG2 XܚsA8t|SawXMO'U&~\y5pF\&5A l$ŀOpEnGVa=]ag<IKϤ"wiDQ[s;0ndKu'ڞa2'3q%34u}$P$"{cJ=yT{ 0sѳϝB^JBnB2Cf˼xm+1+ȕ\7*}:Jj@Vq d.4N ؔ}Bgm Oldf{921f2Yf ضrd.<˕əf[{ӼkWږ#z' 6P T(ôۇD1[MVz'gHEBRET_ɀdI7l#:"Ը~5֛\-nd4qòFj'0s hi(UĂAI"q1ː xzN| #̐#odV+\rڤܸk=+9硚 i @:ĔarQwglŠ_0P@q} (V (֢d.16(%Wٸ}mީ߻}-0~]W1ϫwZ(1艴//X|\35_r۫_r}?߽%\oo>=s%Q͜Fxx&E6zCw4DĜ/d[ %ZմorW$))]DQt@`)LATUHK VdKNUX]:bZmr\S|&~iF v8:[n=+=*B΍s`_p =Q qߩ$~7LQn}tj,&I)Bl&q0v X!C\ ?=qA$h;UKlQP/bBR9&ZZ?j uJ+<5%yQIE#Nou._ 6bi3{Q]>B!+)ޯAH׈mqPoYI/GsvrlGl#6HA9A$l{82w{H@a$x@ub#[ mo.0y6?MNUc<x7ҕj*.zA*W_KȢCM>rDOۊ#%6 ǻ= ;zA[ةҫFW}v9eK-h۝a؞ _W*hplƯ4zε Oyɤّ^ԍipmkP:koX{{ CmlHbl GRVt2`3(36ۇ' #3h_j ޝ\@qXp˟"\PypC+`l?6G5KQa_kvED=.yԤVߒ(;<y=C!5=N/"kKLN.+^1g "֯tkc.-vx 땄F&bѯcB &m# QMB[if%J4|/{wk`kبT BP4¬νA_e}6kG\=vRz Mh~GDG|0t Ҕ⮡ܤ lUƄCY/Rs>A R0NI!3/Cş ߙ)ʧ6Ht%-n}N"Yg-E5#gAFK5L5GTɁmsU\͗`Gǔ "IJpy6׫"%R]K}yӝ06՗]N)ՋtKik)@%CZjJL^>5f!ߟ<,<<ۄu a&lAueCi}dGˮo#}_kj(N 8tg{PWGw (z~n/927JNj.r\IJ-?.K˝/liҐ 9P-ǔw9{-O@7GնE%[ \Ud֨x lCT=~{K=:P@UĹ%h6CVM'R $Qdry-0P+mɅ c&wi;Bm#,ܮW6a͎‰P4dpMM.NznOLlIU,И@O[jev/m;J֕pЁav7HЋ'\f\OG.cĕB'n+eh|+1x\bsAsDvf;) fШ P`SuS' F-l ,H8pVl/)){$w+[A _ o*a];ژ~kbwm(\UOj9k)@84Nŏ0UR1gSV|I1I#H-GIt\m 8CB՚/P ~rxx@շ)`7 M76BhێPĆ`)ۑ&@W~'eԛ!Rэr7p[_ZvNyS|8-w2(z-sp'`y1%T@=ԣ%<:eEtNkm͋\*]:TiJ'!.^ MnB?YkQ|,wz}s%Jvrm9FR:G&h-ɩ:ds  a0.=F 6d&+kY;A"tL"%|IVh5&VN2tH %Hp( IbN 'rlj )q8K&hvfѩԓRtS2OR> 'ԓ~]gS 1k`ݑ?;"jARZH3js*/{2XWTy'bk׊bOc$0D(Xt]YM#'^ҭS{o4k3aؘ6aUvzV\ճ4+w?s(eXl7dPaƳ;%,Nk00:")Yee;3}fH֐Nb!@Pȉ8e9Ea),- CXV֤7D;P,ia(5噳l5)q3WʖKTS@'|٦%/8cXhc,랢Yyfd),G|&%G)Ls* Ŏ-KJ2,6fә֝Yh,yJz~[ja#pʕiv 6l)g1h0 .94QPydΚ끑\Wv3Ul*/EyU>P m8H N-p8d/ 1?b0rg؜R4b-2/T!(Ƃ/Ӊ3M3Kuiٮf`dʘK$F9M{2 6p 0JL#LRGleUGMt\oI3+5\0K86KyqsS#Z0ˌ0jO{QUa0"pT|s%{1a⳽|OW}pݺy;L7_Wf}勇~5چ>ğ=V )_}z=W_>K)A{?yq^ =~$]}b;ځ3(0{YlC\3ll(O P(-ejnKȭǏa^nA2XPBC[*]Ys7~* !GpeY㈱3 ̱+SZ G_ U*-;c,vu3%{2=:N  {!5G6_}}oRGƎܔf>!}*<K>{^^&wP>Y^R|7p8_e)}ھZK9>|2>\<;_}Tgܵ[©]yp8>\io]B)67U d:HxkE%xWҕF'Vtՠ?lu_kl<3HJ|6 k^;kGW GF*KA]t+g2;ӈ;7bMG"3*t0lYf{minbH2r tvזFZʥw `WہO8 Ӏzx-iA,&_̓pL+sN.]y+mTWk' th_-7\9ʉk-b-ՔV,+j Hf 6M0ZFFq3rYxіF#.F[2 #Qj'q|=Tb9n *n/zꩵΥ(ы'{:}*{e*tZ쇽I8̴ F^3JmP4SFDC@Z-wGJ(]po顀z.7|͂^M`ڒ:"׈@CK#6#k9Km! T-}k'SҤ7qyu yŏ?>x//y6&&g/O]]_v_x}?obb׷btǛ7?|`|NOO$x~THq:}_wuCo_>N7?|W?tsꝝ+wuw嵛na%|{on?z/n~tG/ͳ]?yx;^|m7_oWo쿯?~j`:+bSmeYvFJUܰxçA9P dJYd͐Uh)A ^[k%#zF"\F [@xw)pxeEꡌ*g;ZH2ʥxMM*C(1Jq"7t3Ec`ɂEXa0ُ6,Ѱ.a?{ Gc#;JUۀی{?It -Ka̓8P$6ۏ!!d*skFht*|a #G,MKUA+5Z"%*z\4v[.U#QJ*2'ZN֛V2 ŗm1L֑ Y&KQ] TUUN$$σBJ'Fya@j.Zaa-!BH}Tqa+LYx^F8*cVSBM՛G쾆> noAAuͭ`t#+%NYԒS.FŴTmnr&i`3$=+\ *Um'5byFyW pṣVG;ZU<̓9k6(&XXO[ƻqۭ>șsVwE U&f ZECՇ}j_4a-K-e(Դ٪-z.>R,Z,O2$UVz31%2/6/2.(v& J7uQa"BFX'{jJ̧˖ۧt1aEQY"j76ry<ŵ9aQ^^'Aȷ /x&e[|ЭꋸK2&>[ڮ'KNF1ҴYz9 ˟f[bU]T8(XQChbd>"/6h4g{ 12پ/$P++||ǫ*0 '.HpHgl@coAP,SZ NЧ#}!dok,0]&@i&Ҋ9O,$@BL4\&ExuVh#zKF ,%?z$OoBX>JFE&h_fE|GRdJL=$TyEP H& QO Q)#XlՋgYK|4] \.<8M3@4PT'0T̜剠 g^]V?ף ٳ<١ˋ8~)" _Aē$!mv(3%)|66,]UN7[;yp;㡳6o]"NLi p3ׇ<&Vѵ=Rq5=9؋3\_ +^\~~k>H1g!|$+ VNJ]1a_(p,`H̋,%T&&h[#2e~(@rΥ!%V".NJpL\pw,a[ALJ0Y2tDI@ nHD@ ]5YA//@4B$AdBRaK 6\nRb3`Cꜫ{BDNe ;Х 2 EC8RU?3O*1a4 D[%E}ХiL $"XH2}vk0)Ǚ 0QSB}l!d!9YɏdL듏/ɦJ0wЎ;"f_ M3,LV9ByhG_@ A2( 81;ኣwBKK)+ПĬ7"tPzFp%VLqH=,8%TVœYy;e"4?O5_O/Œx6I۹7g9Gr@ އܛr|AT_ޜ!n< =*ȸEG5Kfi!:O5aqbt @ 9{uK1m T@ܘj6 mFdT*Ti0T;f ~絊 @a O]$jBnRQT^#67tl06Pw<)ȓ^. ݹ߫\9F3j5_ OkFpx$Ta'6*P񎰛j[y-8Nh loxc0zn˓üRpA'㨁x1  y:.U<?p5 8cSڬqv[Ftx(bBȐ*}*kS"ZKzf*)}Jx̾6Nye{4:i_,'+{*d $`TWn VqQ>NVXUu jtxhv+e͒F-a"&_L3X*1>y,ZP䕚[6i@U'!ڰ}BiSAF߰rO '3JFP靇jSH(&ՓGHw2n*0[*U2n5\j-cK1G6toCf*n ײjqO#HlGY_a-{.I\XbYh|ͬ$XJ<T$ YIq3HLVTĕ/EX50EuQ65z)lyi^4<_p,^NVX=Hi`ĂoxԔef(0cL^_6Ȍ9`2wL7ve@GxKѰ-7O6Ԑ .%{u$Vy>J*tNI]?[A!>=-`ݓ[۰p;P,4EfXH@ ,uHaP豆ggX98J^ZQ / x/O lRGrzCWt˾ɬ1ֆW/B Nw#Bj4C+'JyHߝg[(?N{ :W.[j k U۷v։&po|@-:(sKF0[98d,8Amm?3GJr̞̔jO*F"RS LEwVZ !ukIaJE3p|zki"Od:;D=fwbtrL|s~`5*LhkY3Mӭ\mC!eq_ќc[ݜb64u6EŒ&0sdD2N^wOɵ kMhNcGnh{Ih\}QB4`d4H&QKO}vRʔJpB`Z+GRIXɰg0'B}4Z;ht {>Ũ71.^uvC\:HXӆٝThL8.BЎIJptڭ5DdxqrŰtDְlXxҭt"4&,LRC`Yq+_88jOa Xe`}^g/Tvzԥg'G-db;$olu3 3Q[WegUL_҆vh< R3sX_#+7*.ܹZ*: '1P j 4(40")klm6(-;pg LpxfO= ʾLު S+WduMZFFRk.3ǀ;eҢ8fԊJKNl:W'}16M{h`Zce!ʵAA eSq(5:w; +Ϧou#2l෱/*w4ߖÝ%$ky<k.ʷ{@Ջ^)&|%ݒzw>^s7Yο>@jLi4o=Mƿ7M/&!ZE0 )FS~w o/d֙:_G=@ʋt*rQdMƃ/x9(k=OY&1wb.Ma'?=t-^\ C@3gP*3oL&[23<":g41=mȡ3K{ZIFd8.d K|Q 3"Ro0ydݷ>)Sԭb m2SfJ3 k?YMf"zMLM[ ?Xط٤j&s9|zEDt0g!nx է*k-Y66)@z395,4)w y_fB}=]PͶ.:o/,sUa?;|w+w'K~< ր׽*{\w5wsg?/W?_5Jͻ>,VX^>T<^s,um/Je&|^|([%>G9?{/,ą oB(^ D3.ܖI;e8SuMKԹy^DzYD Jzh{(F{/{A!7ク=?N~h!g o!&wN 6?gsQ??ݷ?뻏oT;g_O7GۿuNF"k}t?-;7V <2 M3!x7|݀vm# '0 2"V/qH$+E/ة1́ ݐƤߝz,˷X.ܙP -oJqa8#zc ֠IUi"*)l-*V,9j96 y eHbI©HÇVХ)+nߒd1ͅoP;ܜs47J BC3}Y/8F=8KA#lɐΏ b^2"<~B|r.B:SiSL^*s ~}BM҇t"tw~IwU(wި矦_0`_j?/>}A71I ^uJF*u 6 \1?5}zOM}iOTU?cS6J'L_Xo,_0Jn`W]=UC=-]wU7 JSD~%'Pw xz < Q,AxqZf8t xn^u{n:شBx{%oԭqtK:?A"3tiy++TB,Opp{XFѼ#!qbrb\5_})'+*SVa` kr-kQp\U~%?5X'@W>!7' ?ԓR~?^zQ$.O=y~~h>wO"_<Ç^7~|_xZ?{xE ߿z7?}||Q~|Yٻo߼1/|2LA?|f{|_^}훏o޽}ꇴԷ>O|ۗx x8u?}?zo^Ͽs??K}xק/ү/~o__?^Iח\Ogѧ1(|A:бԄ5\AtW%ք CV5@XE.%^s2< oU*Pap ^(I\H1taMhVtQN6[N7k$WQgxUӯ*4x9[|Ԟ/TH=1]?(W'j|>W/"@yw8v:ݻ*QuSHcauplł>=R﷢"ҁV >כBFLux)d} 3mY x/ IE젔P(?K$*݋'bUn9P–p~4\ 7@ Mi< ks53p\ל߿gӌ]F|" H-:44+Ґȥ >r;z%`YmnA֓r-"e\l_g1r2psxq-[HjE-%.fඉd-vX+bH,z$ !&N.mIո3$>65p9QJ6qXpGd,(ڟQl[ap xs(GF4=.EY+ڐLX,rPYdL>Wҙd}*HoAuIB&Z:9ʄNZˁήh߲pDpӎuC+idxFGAn:_vuZ2Dxeh# k۬qDT\("_x^tښt% -ITwEςQ06}tqetw͸LxRO w-$gF0؝ŋ$b{S!f.#|FnƷU"񘕴 9U@ibW6l7qn߈/'c[7s="032)N鲌 :j+\57>.ՈA٭e]e A*oMvSzLA(Iȩ(^CFb 3XI.ZM0dCRG" t#@3d㐼b1 JN*m!C5 cl@0\$2TAM`n\")RAT@9J Ner e!P;<\k:QXnс|yבIꤞ\T ZN/?;,%ҾY|?= E;hN܉raZ93TC(- ؅a4Τa4齯4;DG {r݁H{,5jBaD+\,|˩H:A+}ry&pb p".BvAo~|x7_ͻ5%)i飥(SAOnu#/~4G"IVEҝBJ$"cB uD| .B6,.ҝZo=3-ŒYbjfvOCpAV.qJfvO={.nVppzp4vHɐnF0:J)!ѤMi18lԥnOth~!$0B49Kѥ/2UX'}pM= !.Qɻ:@i 5g >wmtF8I¬*աh}B'9f؎L"C 7RpCg!\s>MQ<ɄI-Ŀ~oO8p8X5<5tO4ìUMIO }, fG^ʛ  TJ#A.Ej/Z -2ք!vWຬGTa FNLHwLTR@$̘NC.0LHIȱ7a| HO]>wF0`;DgʼnSgДwDwJ%\g4Bt6" "$ ' .8Ǫ.< ]|?/3)?LOaŏ^{(#r<޾|8-ŷQt З:V t.MЏ.>SbH:\  0B5d0$n-5I.'b2ZBFY<|uT84O~4w8.K*$`fMI^Vt)%O0gsj`Ҭ.'@ܯ>ƀ ztL"B>lT}Y:ˆOYPM.o<8jl J<]Ydsui[9lz]GhR=`qh@g]zB'cJͤoZ9MN c} kyNr[&.MRr]:Îgu0fp&Q3$MK(<[} ²jճJpc$iRy~ǭek,so8 0s3;τe[ ?;9~-4 (p߈UflZ,[爡:rH|tM6ܜ7h k_>udJM In+7#_*}7?ݬD/nrl \(1|6sS.q. tbvxtԚ7hCǽg lΎ[w!r+Cܜw,8:<(}T#|laFx0CN&ނIdgmOn'T#ۘMPI_|l0B򂑚a&P?R^GkOj`'b57b59V$Elm>T|xx 7y1 q'Xm[@+yn opHvO_>nt?E)t{xRw]mGf,ǯ%Ǖ/̑vP>:b`]iO*'ZېR+jEm"k %Yy`}H׾J&ec^ruIR, 3o~ԥ}eT*7GITH>,-L{ e%=Y6/emF(G];-t7ݥo[x[Oٽ"&YH K]5CJ-KIn qo,ךWEKKG]i7rΚCT~m: CzjKUKۧn pw[ֲ4`8}j$u;aCׂm+n҂6 |#(iZ ?J=vPט%8KuW];g QQg??߿RH[?W~G9*!gIH;|gseҮC(s{!ml !m}qҦB-k>W7h 6vܣ%ނ5]Sl6|q3d^DqwD+NǪt/{toD{sSE{wG7NgonT ԀvxS_ur3o iaf!0M$Dm+60O4f+":4nPiʟIia#Ľ>`r*ͪ~3@P;wz!W"7(o)v$[^wX_tzwϝaU 9qNNlΤ EؖwƳ߱7maf,Kۦ\^?X?x\qHk+svx6=֬gKNZMYCmWa1|g[?:E2`GJoq);~ݮ[ iﬡͣbw!E14Znjwm9͎;BI[fnq$JބŅ2Jgk*AYݶ܃_(Żh4r җ1ݼUD!3g_1Vndҧ]1h{ob(l-dWKY> OC؍iW{_ނ) ifcP G1~wX) aYMP?rWw"|y"ދ"v ьq5FUA/C=v L-}fӎN\ mKӽ4Jqb;Y/3@^N>wC{jWƔmuz҉uzb1lA[mF˃P5ޮ_܉w0g?mH*8NA¼h׆ I뮺3sP{I\Ov,amk>j*3l3gʚ_X :.:ۗ?>||?~xf]dȬ-!J!`husl,00CcW *eLExӿŻԩֻ>YgZhqo)da­Q:_Xi7z;W9X=#5 !EV³gts7,ڨira̮qu/2W/i8 '["8ű(Μot+7|Vq=i9GPvsFShon%m"Ug[I)e/we\YKt)3Gd[8^8V1sLfAr1]Xta۱!1Ux ;ɡۆ%7Ǵ#k72)l状*~qlgley6d[.[ py[jCg Jh:p:1^ǯ#pɋO^lJ^<޾ywo޽OXSPQ`'J~?ɝ`^Ӌo~b7jdf=/?I7,娡M4P~e~*Wnձ!ihub;v_lBq*x'k#Nؽv1B ~>] ./w8ڶPhCl;W4]~K?Zaлc+ռŠ@H]m3aډ緳msF34L5mA4bq?DA&sAmk p,lб$K#eCȺ!my."Mh!rA!:q<^jҦ#չ㠑~MI]CyޱMO̪2ѢsNw`^2wa-6%Oi&hu6sY\]=Bn ^^ cgan͊_LCVg~m}k=a<̪19/缠5< hZ±*oj|+2;>}t]O`TX.Qm庰M|\' S{l։C3>I8gS"e7,k,}\oW/F{1#o<2KbL@|{u2N L:—'i6:C[89ͽ"VXMYFju1Cm29̬c|4dt0yqo:cȿ3'mɶQUulg b`Ȣu+NUjzutA YRm:?7K@ݨIHk%/~t}O:W>\c^п8#~qi%\|Z:t&FK;%HBv ketx)+VA_K@^q+yR+@rEH;_(Ⱥ8Mf=coyqQ>;FeFYS-X̛i N[M~݁PHOflZ.lOyJ) -HoE ^#Wm+Gz;H eGByus{9`ZU^hltCWW㢦A8Zg'cjEy9KPb=PU\[6 ̧W I"] +W-]Rx!wbQQu?,h `"muDz t!ȃIUZbm6>(SL+m,r!sq&/^H rV4Ԇ12*#d9Z-;TF̍ &w\XYIRXU,>^̥@I! b#EX{2j?I0$ &kPԤoh0$@NJjd|ŖF[cxޣZUUS ib5 _A8άY ) nO@e2R(eS@'Dr"cc%QJpP#ZMD>Cۡ*F ?Eg-EeC2Ԇa 6 Sԅ,B jQՎ0I:;2PhSMSETdWyhڅ%-A&N|UV'T )YT#XjBGY ~'V6MWM̛fe-)m!B_VĤ24?@˂rX|#m!X;rc8Ipm޹G(p3xE-+aI^gelDZ }q׶NSн[нGHE=5hUI Hy{S v@Laz]rXζ^1\zе%&(yDQA\R%+/P@+N+nֆpb^64%ȒAխnW- T7,XزEB|-Ciq\:ént~L{:3T[GF;[ Ȏ)~/H 0SBke<`;hk3cJggx+&/+Z@C6rg zZIz#zI梛9G5˜UPDoXNDH$k['*|4BX4z3&sS <ȹ9Y  } 0&1DkGaЭ/8#%|%JQâz]Ȭ@Mf(tUurGPX9@,p8dd|e Q p/ Euzٱ/ɰpwzűo7INSoiekv~^c݉g_W7V7Gp)Ka]{- 뛻 soʩn9_[T5ZSF:·$$[B%DQ&ұ>*|/vYʽ98Yjv\Gxr{:EeiGs杉͠9{t7[+GvvZDץ{҇}ƚtC(70ň5 z5bRjqN3K/uϛuϣ_@ՕIE,)U'~״efvAc@3SpڧM}$0eb;-&}Iuu]_gq]~4 zdԇew 3+R X nkڿ+jAʁhpiч2J͜K`da=w-}״i>䁚66 1}[:dHyƽBa!A+3D;Q{=njޛ^Jc*S}‡"+% ;yDzJ; &!F`^,lfs%)O߉{񝮛bK'L)+zEVc<ߐlQ0>#Ҷl7:;wf xmXX@?X者 [ fƍ KIr۵u8+qeր5hɴсt;ن1͌NF%jPt+ш\9b·ޮԗ'DJNb4ڤyloYX/au5NSd~+W+W4%$~ /CKLt$cH~X5DÚ;6Pvd2^M2bN.t簼$HD8N$9NcϰńY Vj :j4ƀ=latsα LZ^E;Y bSlH(~ooBdwZ sFBCcǴ*mq$Ablv )]Kj.zk ޻;8n})Fc J'Ii'{ۄ] 7;b~Qn$냭YvK5O)rC&-``)2Е+PZ njo5hB֎~104F,W-qv#aݬY#zobNµxr$;E7vyP. LZOjSx\h<.h KҌti7벪2b"``%],pYG& VK3( NͶR\m6uc)C֋)=9ʢF.%1n. mbu'H0Y JHW3;Ѽ9|Y/_ֽ;[+ދ%C)mٔ,vVc۬_߿^=2VO1)ӣgzD_'oon\wO^<}xe懟oǗ^}p|.w??~xuRg{ֺ'wg s)걝_<[Ʒ_×?~_~}{ݻoT߽I}|\|[˟oo]v{})/7ܾˏ__޽M׼xs#.|<}7?~/w7_|KyE>zɿW鿯_}ϟ߯~']=O~UW꧅QC1wI n=E CdUe Rh,G x2&bL2j܉kJ/ 1678E7T}V$U~}^7Qfv~/ʬDH &SF4e)h%qHE>-4cޮr#iKkRz1+#]͖|̈́6i997]KZlN&IP d.ol.l}Hu }XHdԻĎDږIڱUv$d^",cggh;3o7;e9yVN+ygȸe~;xuƉ砦H}cO*QG]Xj|A&XƸȃy)arBc?"n'aB*/ A78,t4LO9>|JyYߴ-; 4$\g #f:h옶 dok$&r n[$е%!ADRd4v%ҪY)Q{,{ÌF6۠<"W" ۞ m Y٫YhrGξEI `3?DySܑFؒS^f  EP6 e|tYѵ0 {gQ 18]XFǝ2fMnq5mP(U]ZxpGTs 6U!,BېL`HmCa/''n$>jEeRAQLJz !쩷jK|%`T~V[*99-#nvd`HǼlۜ{TEMZb2˶4q'hbe s$1qW.L5hiԀ1AR|)ZKpX \EGAPV U[=r/r0Ӑ?̑j4)o8aT([S<), 'U7FCJFpgq' =™5q4hkxC  L χ n]p9ɞ]TZ{e˔+d@\7 [?=q6OAܤzh$ S+~޸Gҭ65ܬVo=Ga!DaKbw>3xj5ق$5eF :'_.Mg9AYwYmFmp@0AI̕T/bER7X̩{WaiOu"Ovٹ 6wP[xW48ܕގZ /HB٩j oai!kԵ$ǠFCQ3@q-lu]' o"Npv[DQ._gb[T?Kպ5,iE H\ ]TZ9,=8,? I ?Å+Vi>]37n#DAfyaMɹϐ'Έd]6~7(k mS>.@S&6Y79DɁtfn* e1hЀ_6)λ^fMDNA7 Atm^OMSf"\5xG=Usy֋|Wv911JeIt 1 Dݰ7lF$l媷- qC'b ڀXr|.%mߐbBFc#b봗/ʵ6HkjZHtSɀO)zEcF""nG17wkwb6N{Kd+bù5[|\6880@2C+봓ݸ;]D"݁2n:?mEN ƹ]ʃ#Bj5ؐ67p,-W>VyOZmH`K:;6:" fjPvdO*iF~r'wAmݸl rn m1+)k*i;rkk=8]v,\xctLLo8wkg  L[1*J4:EbFtVܥxf=;~ERŴ[Ѳ:δiJt|)$yt sr8C͵S[9H8 Ӏ1kKzh1] s¬M1 ɣ//Aľ.9=Ι>gb}|T&ҏ[˿ǏUN:<ۗ9] u|Wƻ͗z_~$ɰVU$""1+/鍣.)8(d7F\YeL u0$5ֺHJͧ!P"q;-J)O @JltNjyfMͨ"Yp7f2n]_VNB0/&>Mo7ò{:Eziwgh?5r/#'%qqL29od0 iX>,\!@Nϙoug> )q[\pPZHqZF~9J$_hQ,,f43L58=,|*:5u)9U4.j'1so-+%L #z:N؞eD; Ns\;+0۠~*qqI\KZ af>!Ȫ'l> ݘEHԌc2&BPQ jdhZ T4p <8*aMJ4ĺIEXZ]K[ܣWTNp#[AL V׺jYI򱆞.R2T ChH̕@Gq,&̖9TΠ B<Ɍ F ]Um>]ʐ-k<ؼ_"ihѫ'a-1!DB2_xM=I[.D(zBݐ0zg=yOWzJrY{>hKf9ƕ;PML32 J[8O'L(z$8l67E/䱟oXTӏ7?SWx_5_ч&,\;uvaAFQ%W-k&9Ԫ* 4YE=SWU2]oFWl*^,u. 9 #t9gX,TYֻ uw"+!cNCkFŔ} .49RaC$d0ht-;bs$ϤOʪy_ \ L{ Q9@[8b/Zcվ?4qV)N#^~pX(fƕp*|3X:,]Eنٍ\fW "ߎZnmKM ٳl{#5b[}f8wQ(BOFrxYÒEƉvgnpȓ9XVfM50JQŤ # 8t^֬J.ZMuE+8SAMHc.@e 閁 ˂ PR<v`)93m8rнmv]'~`cK.1 8yO$\FiE* x9 R}jgdQюۺp -s| XZ[zRⓀ`vӏMQ,7׮?ח 4 -ھ6IQ,32QC7QTV5V uOZ,p旅RC@hhq]_TB=M ׊Һ~jNƘ/NIL9nT 5AoՍ>BU4_VmUZ&-}3TM 22@nJO_nߘV#Rʮ`Rh>([aA?/1/&6+<\U iLqʀC&>c̮)([3-8o"b. Þ ,L>rem8dм5bOֱnOTg]D)F=Bl-i4 Fvp$*ITȀ;6t3%$GIfEk?=jvսBSF!1#"\(&ԬK G-Oڣj^YsN??|{s?KRo}ZPOΪiUKjAqˍv{Rj*j'}kso'YXk޾[eJ|/xooBw?~:mᅥI+2Q 2Q9oM#xB/gIЂb10?3ԔgIBM2zoZSl C'\# M3|)  ŧ\{P⋬KU8)%(& m ~`&-TƓpA'׊%-ݰ6V@ڗ <2U;K"8=YVc3&#XE+jcPv%#3 .Ęk"SF>y t π|"lz]Y<@&+Jtg h}`KZk,mrmv83X沐ӀQ8TgsyO[HDVWXa=nu9r*A(=mthMY=>%$:]lwI(dl Ο?[&<e.<4[`ef‹ A|d}<-;Hq]=*w,MPŚOA㓵jFq5 ҄'Blb+~@WhENQQKrm֦/cˢeY W UiόXvȋˣM|5V}Bcnt1GWrIR4U00m^ V(GRRopFضbw`]E1 B`h-د%7ܲ#H˴2!/ExA1].*sPjගP>Qd=C2$+k[s}+bYOE,6?{2CbkŶ)֙S0mJJxqmؕ5Wmtٵ;SHmSb#qr{x<ʬqȇP҆܄6Iw#&KXT$h^\C/lϩgGșD{5ΙU+*vm64/[e̍}}q1{wV酠I5wpc^,^,ԺyN.VCȬL@MNƭ P^} $@8WGM涭go~7ƦgUOWd-,ĿԼuKoo^߾ۛ[ ~p=\ߟJ~=JT$<9 r(P= \a^Csi\WWՊ3 ªNy֒ԟ[ 즣8MvP2c*Yp`!Cd-9o\>\< ~qgekV`ːwPJSSPKTMe]+->:-YcX6' Lv5s,Eػ] %ˈp ]ۣ8bs>Bn:@H*9UQ- F\hE\۽0AQJ$ w T(R( B*Ar2iz]}6vH* R ٵ.^\`? ߕq< lens_ mаmiB*`dP]Ϭ`0qZc14Ql%kLXٖBoƹFh Gw4煉@\6&[:$Nb@D4:bN՞+]!>p."!ّE4ڌ TKT:s:1'CUfp=UjF0zA(\S!Mk^t4 "@X$dC:X<!UVg_~AN։ #%w+1Lj؊a.F%N%?o1qENKuN77E#Z,} =dgTWᴧޅ/a;;O#GuoVU/TAOF[7ـ&!#qA)vQpx(ӰDh~T'K,¡ J(ƨŁ"389(^:hxہ3V[q k\dHHVr}% 跷)'/9h砟|:,˧?-k}ߟvK`,0gYP8h| e ^L䃷$< &Q,la5=2SufYPzQ^#gG5%SsUk"|Mcdvq@؁K[firҕޱn"GfiH<̋3l a* xjB( G7z&c r%7 9hOȃȊFX6I|x/C7d t>01Sb#֤ؤCM sW*@~[a雃ٜJRS1DRqkYa1#.0]q>l_s,k+Y(tD<^n(`Ӱ.w=YMP@z<0U"4jF$=>cr“q+s}?ؽ&)gX\6)?Oz]CZ\Ù\{F"}>@\&3m[YqDuI= Px4aw/,L*-)FñsDI8{H+JA.Kz&~ L(>\w/ ֢L@YVWңkYhR\uЉP R%xo)H<#Iы.)3ݚ~]BC-}sg[#1ÔRȲY7ŕh_ʔJS7/ݘ6ϐ83ѯ_?~?^}|W/"^|swY?/ǫo_|/W'嵽wo~]:} z,뇏o<{q?~|v۷wwo~W{{wu'6߿ ߻;ic.}s^{mw?'= pW៯ÿ/.vo?/Ÿ_|:ǯ~x$V^/.V! #㵲ʅdqFq6^pFqV6.\+oit%q`ahBYxY^/ ?0iY5 VxMTO]pIhx;q:׆~f,\|x?GmZ|P*,'a3T^<C-Ӱe6*\- $@iXoq:<5΂60[U g8V :^qbp? b snD`ײ@~ ;-j%I#1GN^>Rfkv^;p2ia'\[F$YSSyPf܌4qhCZq6~ @6zw? gιr6ڮi#,-MuNgn8#LqlJ׋$hY28 tYs0׸8`ޗPJϥs]%at9‘1oWz֘sx8G~=`0@QGxvNooգm7DJ!LgD 7R)"„,ߪS'R\@P7a H#]_px<#91`~09BOFT;L? #-"_O7dϟ%,ivp ,6Q4^Q^WPӵ#UI+Fܪ/ XS)>-QbA-7 vu{2,t"n3 3$(kavVT`3Hsԃ]mk~q8i];,,\GZC$\G?r1 t%F N ,\$My=Rn E= &%5+`;= 5x0k8qY.Σ # 7 nwIx=ڼ^_ dRS S5p.Z p4/j,|D'䜿R?^~D ~|Ƿ~y}oӀ$9I=#@$wH{ >0oD R>H&U t쌝H|TRԃl#+;j?ۨVavLTH%҂H'a\fF9#1b.\:ρ0\ck|ٺ709ĨK\!!@|&^kpۑ d ~b|𑨪 'ȡj7jVI/ҵ oJ%::n,%;98M(!\Fw}"_Kf;r(L6J&Kꪶ;NfDbI'SbN3F$p83B" `ty8M$e_}p!r.GC&{UU*w'} @Zn`:<-b'GPL,|Gu.XRT,/;qA!2'APp &[e"T\-w0'\K0[p*"(0EJ| N9DPtpv''A{؏&.abDAaxE-A0& pA! r7@P84J@Ye6b-!TAٻK!Ϊ5b0W)='\""N‰L+I3OO3zr'R(]?_?@'q t77wn^||_?ݾ?]]]~O`k(Á ۃOx.h6n8̀TVi6.Ķ> 0X`W;;.sjFDփ2'タ0q ~'FCPuW5Γ^@ޜIL] ά BZ7ASpl$(Q22]qYA% ;HV8$~%}ɬS{ tepD GLoHf0Y]Poو=: s36A gz)g0BDO Їav\r.LDʢT,9Xo9H绠&06؇R !NK;Ev mPk(ሁ)aP^9Gߖd /D. =`I5>~_'+MP;bUhhl\h̢ߢ1&1e[뷣2\KA$|f\L\!O̾|nU&bQ.89^zjS@h!]!=faIEքQ}<)vB-׊N DsأHAt38K $pKWp&8d¶*KNu# Kp y;39rTTJe ߎgAHO1tZzl(In:W&L%AHPqDz QBɽh4XsU6*"PJ^`24Z5t w*}vx(PZ qY' #)r^Ȅb̈́ 'z8TVc;>J\1 X %;e+PيIWl#wKpXGOEי_b0KIIl\79xUNtj|׍Hl g6*\g'I+4 sԓ z޻Rxt)7%xl[0z42mɲ 44؍-^r^<80Qƞ0d~8B\b!sL =bMvQVM$M zOLo*[Fl%a*PT#bHW_pcE˨D˷X ?- Bv+MW¼Tma{{sY&\LQ@BFA!GG=s/p5y.e-C99Lة <$"8Z"!+կ @ _G{k%莭,zBģT4oX~Nsc"8˞S Tˉ b^e+T(Q5܀50L; [Ƒ>iBk ?$DF<0F,emCk_,LHR)JnLJU.ևB&=H҃02d'9 ܏)&/ↄh9+塭Ap-X-G-Sh1rB-2܏5CU- e8sRhk0O$c j̐.eW~z^1޲Zvx ,_?'!fZt\􆸨1E8QOm, 8]j&_n^^/77~ c^_=^~>W737P¬\ _LPy')|y0Ĩa^U}j*+2aʔ ISڗ$M n}[a3Ƣ*z"KnzTh_gKj(6=@ +TdoqźѡNb~l$Vd^/ևeֶYT@ ⨷/0 #^X_5Ku=Y %tAgCm 29Ԕ2^jCCi?<&ۄVUFl^_ɮ1Agˁ@ ȀsBˍi41A4,xtzraj`6g(O㄄ @+9 ,۶gi"/eVbU]>5""eu$vHgN&$3gG:sghUڄ!K;)zQkQ(zm%3WW.ip,eεa[p+% ƢϘ[tX3GUA.K/LC-;9cTlJBom-2$iʹm&hXX"'' 7(Vi-HymOFPٔ$< ?!-zj̡ss\×nT3L@kL=CҨ*'V)K"eT g 8j=:e-a8TL̹L*ѓ:q&E5Pa+H?e^i.C!Ց[#>R>f4[*g {3!" Tӣϟ>z~u׿|۟>*A}"f U}_߼y4%ӇǫQ3^<7ϿW?gx!8*X~. e0VD6(Ī^lZĀUWvTPkXUJ+P4#$y2g%iEp6? mU)žńCz|?+g/Dӊ:HViĺl[2uv tNZɣ1jw)trI}8w?K$Pgkb]|1)#~ TNJ(P}>;n״QM\r r> AcoÛ2 hQ +gR*~|Ͼ_!a Șr{%q3~eݴME'y.Ӭ6v~[e@/ʖܮb`U*p.Rc|P궡 cf7̠[HZQ6js1bm>d2bf2_b t?\J߲ˬYSE Šn]aZٔ`ŢVE݆:t(4#Q8+)g%43iC9;[5SKz.K67kk5~+MgR5êh=0d4dǒYi)~0 2:F֖n5G25x撟bKr%S.iG*SMnn)@ڛ=50Z2f`,wi} OcMA;ˆ餖Қyi?;L)0Di0اʜX PmZLٚ~ޠq$jQ W+W/u[HYÍБqG8=9laFUj9. M3lL[%rI)9q>ecgHV>yHZCB@[QjA0R-sHǎCgPhF֨Gy^)Cv&ZdQz+HK_O#R~P֧U-\krTYoGG F`1Hj(@$]Zg~)ؖ[){lg A3}-ei %W{$(i݋s ZY|NRg+0d8ڨ>w?$Hume^RQIuiƪ'\&n+c&0&uS{l_?FٮsC=A6V Ъ`X/W ~SI)`j}@lQO,A\50 s sSj8%jL1 c!ξy uPqp%n6Ns&Ϙ*#F@C[20606N {[Y:1ui)nA Qi5 !q<)6yV$-E1.jz~:= hvA'Z38CSkS8*4TkkÕ2PFF3\_IXgz(HNy<ꄩ@tR녌QUKߏK`#vP8C7kй8~۸`gB4=Vʻc)jX\*rM Z7;᧢rr(fУ,9Gj0;j밚t2z8K󷓞l5RbDQ)&6#lV\?|l4EУzINGG/Iҋ9E7Y/0O0`7QQ__ӏ7oïK#!a'c(%.E|}wa(?sg-,SL^Rz@s; Y@RS7:VMfpHHp4r%4Y8@ԝ4%S5Cէ EQ`֢Yjr:`# akG\Sk.bje7hq#4'pRR5g{Řk.%d:ِ3&%۽U@P݁V+2$,3@e\HJSOS{= w<{Jz?h7ܨљP*d8 B /5\˸ :t3F8EQ(=3\X$Ê4Ӌ8Ϛa" fRq#aGyǜ9'#gY߂@ēPEpDŽ0f&RW@n_KazcF!i_bR`Se? qa`csuKo158rk)BDQ{]3&;gkֳ,d\voZsegM6 &K1*^UL6Q͒wZS#njf4~'wZ\v*rǸFH;Ra]@i[WQoQ]d ,/&d=kZxnfx, Dg_8`x RdEƀha?zF:qDD8@)T[+j<2$Κ9i&1K͖FSrJ-e Gm[_#(WHփm^Pm*lgQ.LM( X"[aϸ;OUYG&GJM @;&G31i>yz.L?Ba~cͯw ,Ÿ2lS&q5+$&ƿS*glp0U$!=.eWx zB3QU4k35KMMsֈo E͡3P?qd'xfs~R" V;KKƢ-͵ Dڭ/oD0WYRg[©Z^3UY3U0V̟mQ\Ŷ^2kmJ>L3LH ! a^-dԿV\[?皯>ν:]Ph=Y9ka "S m͵9gSVV9<3-NaFBV;RGK/ڞ"y!Ҿo^i0[B(0 riQ:MegmsoѮ} c<[-!U8y '%W]gbM6~NN-l{Q*0a{1}DR͹k)9$QrTwEnѩ.!6WRj2fl<ҟcV$ms]>Dm;لg4q\[]?y6~Dgy_D`t+7lb:Tդk꒮r4jRÌE 9hkWɦR/GD9\*e-WsL8m%zm5|pF?=P 9 #jLXz3 縬VS1XR|],.iv"PpFb }8Nhy3%gAS^ي̪œ'oVe(SԄזHq"sֶZ"FHO2j}+OL{|yBI0XKas$qfT?9'O8Ŵ]CdU@ŒNLzfbP_Hڐt"~%չ-"XsG0C.?>w* R]z%j?>OjHg؞Zn*M 6n6 8.&o6Vs>`=-n6T9h FQ6z񭤫y.5dVkD+ҕ'9^Q`+?-n:1)c<({3"%',jqx,vrE(x %?u͸4 0ن:h>-RdjP&ȜrRWKnsd _ũųZ{F~ܯ7=~vYBC(0}Y\Ǒ3`.0*澔@4EQdKx`ْ D7멳DҲwu-2/6y6Y sg{g_Iw?*<賖giC~A . Z S8+s>X}T{! ҿ+|/V6|`%L&xH+99b}Zi*. \>+PcI/(^BMߥ9SyWuiNMJ24%hs<4g_ISw(?-›CSgeqK5~/Sc YTG ȧ8-g)ܣ4l@Hǖ?O ۦZY_K`LlAĴ6ɘB@nFHcs~ʪ%v!qӦdsF$`.*CyAHgǃ!GڈAE4x \ ex_Ї`HI \s:OU)<гV[@mbʌҕHO_ 1jmdDec8D7T)){yiW#QKۻԭE )AN~KAMJ3PCdO#o{ 1cssZEp1 ʳS麹6%wަtUd ']#k:bJ]m`iXtPX.ߣ%H qK<@2+ց} [x<]%#S0)ߕ}xsw~o^ps]Z͇O᷻~yu+tןn?nNy7Kջw;Wo`ĻA뻫O9k42zN}v9`G4k#=FGV<'7K̵L 2ll3G$U3XeXxYi٧GƳJhâPQ HY7#aqsqNj2o\U|X~G3<%2 0e?mBqbd7p%newĸqJ2< ߢ!dQG :KiDY% &? wkZGcX8T/[!dg'2CX Yь$/[h?w Ei3E2]hy%.7u },S5 ~I99Kx^r3kpA >s``VJ`e'P>-J9\IGq* CS *Ii*3fe)ʜ!M{4j^TqWrz#)vE.OdXpm@H?]樊[5JkS7D=uO,~%"zP@C.Zuh@7NG(1a)Im>ی/ qHR~.HꅈÕ$zYhr'$e>B CKL*xѪ_\QR}|?v#ލķxn$ #yd^'<؇ImExFYjMGN7ֆiŠ:0=_DwNwr; x]G{RZufւWjTSx Du47ܙ=9ݺKl!3Ktfւ1{xIV$#xvwޒ$ǖ2xM]8\ r4n3o$ql!T]K;aeI\ p̟Mwŋ 4 ABPlʠXꇗ,ؽ`A=3ՍGGK 2l]7=$"2yk:h9}Aڮ0$/:.0(Vee~vIn=nN' Dɡ}G {LtgU|n nbK-soS>̯R~>}gvtZo8YF/84fh}$Zkª6`f=.  XX+=ސ`[/ORK _HA>`0j*Ņqi{$ 1̮^f5pIcJ`;Vc"pXp2{:D{7<8=x饛9_$Zt<=r&M$jtD/|[wO}HHksOhG ofG|ͧWo_~~=Mn>^⃫e_aיlj-4 7W"~b /qՑ wfyi%@*V{4 *XR^Ik!zWJbڀ? w K:3q.UWx+@Qa%}xe l..k dG[Ł @TG06pAtx%'-ģPⲰ}ѭwfg21 9$Nb''}z1.B@ȋ>i\C1pL gĎ}.`c~'dG%9"]e, D+ɰwv<_QܚBbWU?tcDk2x<ZmU Vu (}qWD^#be gi]`rӌOBVY`!XqFkS 8gIEYʒddáD<9-5bPF8XнxP p)Nz[VndKϲ G,QJfh]/H K("݅^2*+60"w/V+Jְ#:!]KzL4QM}SMid)u[6+S՚+zӚڃlZq.A zvI;RfKgiHXr%2Xa#V-m_C\Z1-VRj+qMqY[pع!g0^X+,:+}h-+aRkak@5-{uꞅ$ bacRQŜkf]]@pT vϣh;70J{N0 `@V>vgj"(8CҜqݶ8;\p|vP.e.IԾ-RܔNu#FҊ5$A\Gy[`Cn5ww# ň:vR7ފjYJyBi.͊O*[lR]w*ѥ3H %a}zϟ>&ւD˄_zNoaO?\>&C{.آW]O'*3{{.IK+ ]!'C n()w1'J!>B" .Uq iy>FqR9?1?̠Z@UF9ē鵧h p65o"`((03i5^ǠO䡋#fM$Dۻiɸ]`dHbW!DZZ 9 17yJ֜~H 97Im0["|dqhOf$JqψB%lwKĬp aդlMoؓO @V93yj-ŤKbdԘm;hJNjŦE$]bih25T%49`]!N /i6DzHQt>gJ:45(-E,٬QIs;U&cZBRP'%.%`XYqcx5KJyֿWkL8908@;`HE9y#DH6ݥelW":('6AEPzQ͌8TFgx9DTuȵ]Hg0Ԛ6N'BOƦU])ce$Z :U>mo4 tlL/sq ^rwE1d4o+J(b ]%+QM/(!HLujEcu#):Ꝭ"3xˋ #.1B =5*G UTBSQfKTE$<:Iy+2+)}ȔRJ5:vfJy\{-;lsmB\岨&P NFʴ$j6r\fIV GWff@¸ 5*SkF>U22ze>bFרu "MstPވ:%1Y g:ne xe^v9/x7xTbiL/Ys8][ 2;B"$u XR@u!VaN5J*XNvtiTQB}JX"H9R_fFȨSd ũ&T-LirQX9WDIZ*HEp:uMHԩ ϒa 4P  H,%ºλ^V(`D^,4#42d< Į0e+{ʗڠ[WWƉ4+GznP6d)܇aO PYKj/'/} ZNZ{^D(D0Φ*(F"[S$jۂzi(-\*,a"CТP /~SCJ+ J!ujr-HL8Eѩ6D%:Q}9d|XlŃx]li_-i!PY#EMZ˴W-OI0$jj`MqX[6&+;[z+fM"hu3K1$?QEXqʹf4Uګp~ۂTP]zǿqIA='}=?ʒtzvlv+I>Y~Fԟ*<>}|oO~Յ{6/(%Otgڶ/u"]k`;[aV8wV栴b_Wt:+V[9@WևS֚G94 ^nuveA-Ɋq1[ յ:IΤt Z <$>g5ՠ cZ飶vVՕe4EdiZK­VyπV.i1Ql?vv l"-0NE >_d"T# %Lae=9'58Jy-FrrYͲƘ~2Ҡ${Y[Jr vMhhОw568P}\UMIP*ꋤ_4VmrV&`7d,EAotΜ'1Q7*o(Ī-*ÛBkDf8P;YcT\f13>מI0/e TV*T+螽rt4q$R-N}REu JukaRǝFc.Opsd Mqf[fQvM@ I.( vA/@p ZZ@\]_z bzcͬ,s BNUmWij`" õ6^֚1wSJ3>uU14qD` 2~b(qbVc2lwO'ӽ[D%u*[*n$7Ѹ$DhGP˼|# zxƦɢ鹭^;5KT8 Zat7J޶? )dž+ JE`BQ6X*g"-gԨN*n'1,yd#]7|%ka>/Z\)ק[P:lVR wŘpw2U&N+MHҡ{AB%9L3Sv@]ۣ5HbL;ͮy„ J` K4侒 6 4젢P&neJY7Z]E Kb4[u2mbfj_$n(sKZHoYr ݥ0TC9*WԪmT"nFTAzd'a?!WOӳկWx[RiܯBsn(*iURY(qJf ;,r}/!xZvR#}2lWyev u(fwTnLiߠWZvRgaOjT|yW:q\0qRMͤ]W* pYɰck@jR*f+Gg\E>EV΂.p!Ha`bGʶH>;!ώ4|pQky~Bt߁AeL {|G X-Vev3/en9JD-7-2yw=#plh[dInV uhv /Kq"PZr~95TuoCwخ<%I8%6*0`S G1ed΁9 s٘ Rttw9hݾjt5Ddf:C-Cp՘ Gn$ƪf0qۮB3R5`ZOۜYH̺~b:@s= 8@l&IK4 MGHI#Bjf4nR۳$6Quz*slr=S * ﮹DǫLd d(l?ʌ 5Ua-ZM&PXt+ Lir(&h-pGGV3U$;>9VScB[wnS-ʌz+1 GԾ좤.ɻ6<>% jza+#aGou|oͯs]+8kҳ*d"KMr#Pl/6L޶:(픎>T,gff1/`ˆfM!hscK/$րn0M\2T8 8%a#\nJ U](ؙHLAo.u^f/xpzrHlPCm#.9'ݍO-Ͱ/벏XΛ7ұoV;'*-k*V3쫠/ O}@Cw!ųo3&1"s{&r_nܺ q^BM_\%Wl4`2= "Y̕g:x̹҇E;Enfs1\ٕZ,pA̤L8燸g"OIpnEQZg u̽:qa+d=c L +*H(29v:|Ut<8c9wq;h(B8LJ/MՂzHu%!Egok/B$QUa|BJuu[ډ(Nj86n)1Cg;*ﭳeL#`5IÁ֞KM ʧf6`pMF1f+>Xy2ѕ_qf[Mh]{v; 1.օRFh{͕>;Prxt,PmCwU=% l&Lv -S/FqW͖[:<͆"ױK[;,P$q[= Bp) 9+,[QؑѵEWwi,Ql9ܐ#xP(DqmwoLeufl M敊ٌFY;Se\@@=dYU_ebH133R8R \gdZKy2C%GJ]ve7}Ls>bSø; ;[l?oI\^5g(nsYmCqv;b/]t}92R@>M]GMTJAvYy(Yml0'*о? FraJٸr62B2"p9 ۖ;%ar&\.sLZ;ҜE6%d䶢b/Yq(ou+*>SWcu:)uGށzgv}]r(|ٯ)"dY~27~?mx*,^2%dj2s_OI+IP*AL{{|R?;'P%t2K+Nsr* \װ߾0W'kd-YAVE>;8x"(uɹS|U\,liж5|'ĈX;7*N.6[J;Qgj/K 9hK~z&Й+WezO oѓ5ٽ'u, 2&+V~}P r/zd7e:{[4KcrVv~ZDёD$Y;GJv3[y|raDx񙾃k9Lfp`+si`~ʭN]{)&is;5 MW"^ׇUӧx߸*@mgx,K.Q6hPQY!KPjnv|.$ژ,`gY#iisnmqu+ޠ7F!gսސT?nZ'3q5Vjd2]#ug&f:crlq2h ndŬFt5[Al9<} Sqsۜ6gy+SlO??×UȨB\Ϛm~JRSmb!9LLV5=eg\p3W`ITGoE5afa\s:'^BfU9t d!f6Ꞷy度s+P#Xomk%u`NĢ Q;Z+b5NϢ>AhzZ +?{tAEBr7 BZS 1Kr֕YpK" ǥ5 Fnܽ.{9`vkL|Br3PѠ퀵_6bWRס#=-! 9@M-|Uf׸hu!o;aNe`7"/ Itrkpr6e?Xi{0u>G/BIj{ ;l$̧b1-S7"TYf@> ϣ4JKs~x5 CaH1AmS( UQPPDTrKӒ% u@nmG29h8v ("ϭdYd<D$Q TXe%ʦUiPINZfO|LeTؚjE>S& +-I ȼ!u%& kK@xey3qF ,!)11O"2h /Qya! DQfҐ@s|)0q|iP2PYPVC-_gP+*.?$۲ @ j[)w3dëADTdIcOPƓ]Gea uAn5:ZqEkU&tLr l`"2U%'2 FGMKh`*h/TouYGe=?'ds/ɇ @-$ mVr\ T'}$ :᳭ Eʁ+  yWP_t)h95p-eǷ/Gjγ@4-?,+U@y'k頇l-ղ.sVeաjGuL` Dl&bCRso^7$oONOzY|J_=K'}o_"뗯__77oIym7o>^oov}T"/_|뷷zݯ^} _^\/}ӷ/ǿ>~u~ջ|^ϿHL:W/vo_ϯׯHL: :؄X*Ndd %~4N5)zuhNp ta3uӔ0=*7XCȘ(`eek`Km:e?( T kO`d_!<vuIZxc A;' -dFG4 7WsU/s\mNжj 9mfbMZ_̫ y Xmؘ,r{[}ų4=#'@eL(9:l׊ #7S4;yfWcd492jܠrYw2a(\}%)S=VɣWPP/9R4uB)5JύO[ۇ1@4&OCI3gUt*U`kΨY)+~ʞOȻi*h3b+5'T㛬CL1: &I,u\&fQGy?쁛ހ:@dZ .@1xPcuU\H zd&`q e[IJ5дc =~CfwF37_w2ҧM4816'&vnù+*`0H \BSb鷊ny3{?/a $H9rœדs=K*`uş_8}^n|f\*ί3A~5Ɲ?nϿx竏r7|?%Όaʴ +w,%U{p=j`E /lmi1'?(lIs[;UK֝H|VYd,)֗Mlrj~{* l6ѧpjd]ƊLLUHܸ:<$BK^Gx0{s;d>&@~ gjHXe=`asJ#*[gvÙ 2N9 7lv\-ILŤ0.FYAFW" RP}m\\s;94A&?^:6. 1^#4<ݡXm译@bW'RMު#a8x4'X`\aɒm̫ -Au>Zژ1TCAgA O$Aʃhj$UT:We9rCNܺ"v Og.Z2ՕVEU)ifqQ)|2f7\=VuKV`K:UKSҭe'g]Lg;g\6|4= M7CUwR%/R<߁c'+~2F b~OT+HGV,ac+|PGf;kB#oHJ@%c +.۸a/2O28EA[by@tVZ,$)[vp[34֕UADsZzme ӕۻn`N3bIֱ̜f V0{>Mxn\B53XoTkYs_XY_nҟJ1/bD]e{hfZN=x$JRy "F)RC<K/YA KN*- $؃HTX߳W(hZo/U9-N1B Z[ hh<@Ϸ>ʄw|fңh8@]o?Z乜` /MIx.\9dTBvm51s!6Inj=;^2>+Eszg.d"ϮeSPUj+p&gPRK D.Rn-8<KNVm:t )9k Z.^^jz= ˞6 7ů&7$bګK Τ|s.]ܸg)Ր0YPuyulHly諎Vw,r&s!Efӈ뙞֎Pu>&.8e֭󸩆9 Uh˟\b;#!'x%#K ƣ VA?eZ1A[KhQB.L=ӵB:Rvbl2Z3AKWt!LcJ>J*t2dI~JKk #>؟.>!mk4]/JDmó &S|kaIHZrB<_r)alwSCԹ@]q3SͫxDGtDޙ5VsOsl>{.fp67ْ1` =IӒ6Yb L P7Kk$N%UG.317 [{"^9S ;qz 5{5ƘYaSDvSzF hRNfAJnef:䣡5!n'/̗72η#m q;qu|  ҹi55 I`ñ MnQ0pLpLqЙ+*<*pc,I@.Xm>Yܲ^$6 ~b4S V]>Fb$ 5nԎSY;6Ε(ԍ,Ɛ=H$D1 hx 9i1̹k }`ܾj'P;*{7foѾ}{r'!<߇ǣk^Wr_2t]g@5>k޿.3B^9Ӱ<ь!>k0$+6of\艇`Hks Z鯳p]m_\gG+Sy,7'`nV)-JjTCW{u8^3a_ʻs3~#*[vd/^ebVH/ +ڰk$q:rq8GrLWl`C1ei8<*ڜ hF%;ܿVQXH:+cBtg%B4jEwq5[Uɨ RHevBBxe`Ge;U65<ꮳ>Bg4ha.x,RU})OJ{cr&BFx29(u"S={e='ai"P@EURaK,W㤒(6kaBbSYCʇ4w[cEVnHDaw\1b˴Tz^a vճ֪2 s~II&3Ґi~SEőhxXK_15JZ Wmbۘ=<0?ayGWLb]-xADV6)#wtŔDpK1<dw9">'pdk:p"@)'@MqL2q~`;m^m#P+dh5_Z zT,m6'Ҟ_Nv%¾3dĖslM"Ǿ^i3.Z+]zԱOt<A_: 37k^QJ$vLHcW%\?oAyX +y4rs@B15AtU.f3(50ztöɧabͬΥS&d})22^rx0;^|HCject&L"N7sq#9N!z7WŁh[X N0"B348N9Γ_~~7-$FOgD[b) sy `_E7揋;@}3̈́%d5m'?#T]R=3m3w3kS'|]a5]u&.&6 2xa%$|euz#e ڵѱWONؒ#=[:H7`=R #v1*Zk+tJ:Z΁8:si h3VokS؂|PъmoV,B%|\426K ; {W'ڏ0XZp[J1_n_Y_10_ '-=suW8cvQT; t! .>/ck1[ht hpؔE-S cWg:ʖܦY:VeN]]fSW{Ǽ4n7i "?ɭ_ymtᐥW]Cst9Ś=K!hW'S iH+.7p34ahy롋??DgV7 K'O3@{fJvLfˆ1~l3k7 t[ nW4Rz8 㸺@8E.r2%f _W06uM?7PgUAR.1Y`'Ņa<"y5eG9$SPNAB% "l#8p\'S{UK6Z tľScr=Mn:YXp)vKuT,֕enZy"(os(Zu6cIhvYj3d% ԛaI@ѫٽLJO;g:iz۶_"0:A\2H㍳؁ ')z2Ϊ6A^CRzohK=Kl\hS+08b\(aҮ7;n{yڷ,iVn9Gi#%Ҷv|vTQ:āqu8щp//Je8ߡ+כZ(@6?z2q0=A$SrnFJ 0d]cFT9ѴKSjt|Ukߪ̞ElȚCJ:縻kbaηﺉɠ>ߍ*Ć$NFUWUȵ=բ^y L ɰۭ/v:P;]mf6+RIjPNi4wzhGX7'+֝Y (:[7qңt\R nB[C9b/?+7?0yvb1ysy?)L@oU_ru~!}񈁘tygR11ur׹]~gVkZ;I+XQфeboU͘c`9v9Ik֯e8bgN2Ҝq"] % u ƎvD"#?,LQT-zldI zȒ:⳱-I[ٚVj"tTaIV{ʉY;Ҧ.?ӹ(m&gr9O, ޝQZ3`Byu"@dK;GaIv{e҈)M7\dIpue7yES'[U`Oyh:dsX3fW-gYKphz IisةeLҴ *HK"tt#7x6冘 }"6u1C݃W I)*[Z.ϛDKrƢ҅3$b,G czCTw,=,YLqc 8%KR6衔qI $sH %DsxnEB8σCӚw{0K ԰DCI(,S&3u*(i0@`%eg=Vѻΰ>iG{J18__adcK,Cb9w0 ve8HOzX)Z-X8ai=PJ,#zY牀aynJb$ñ[)c *DU=_NT9C 4k֢nS3q2{ Z}ԈUc8ƿb(VҖtq9~XjX<|K5T蹣`a=9ZNOɩޠ+vb=׭1{#UxcH9=inCI C83Ϣxy}"kW5cJ+(т ? 17T@,by%ZEnT9h6mmwTY{ 6F=PP̺hjMN5讓Y #7xwָ9|d4lTLקrRș]~r|ubejb)H#ԺAW8Ut=bU{n> zz|Q:s݊>6qA+QUEmY/Xwq>bC̚f=R<@nÙ UݢQQШUT_yHmk aA;%ݯoP,FEV 0HBJkz f2TRmʊ 4ivv$a &@ׇV0Q ]']>̐#(p 8_nдO4mca0pg(9HjPCXZBVK7K J+^4cCOtKHbׂ2 1{W* mSQ`ZzaYAIGx嬢qu5\؞ʭ#vԶ{~L[H~%ṱEH:$q&.i2"iv*bq^IgE`{6so Ѹ+레eضxQq 0 4BC,}m7.9.Wu}3@fqz~ 3c3@+Q:CV]^L媒DQ$[o/nrk,ߺ֤[konG.bVM"nBmo36^KݮֳۼK6Wׅ{ulΏ/vBo Qk-}1]G8>qV͊=#_L}tߺ%_jDoϋtK7K{LYFB5S&n)eY2Ed*Qy9r.jxnd" hj>uI_F/]GbBP ,fi-[֞ˏ\oÓ/M{׏a!Hn[ KLkeeߕGs͆$z]W,ݗYfu>Ga- k5' !\A}_X^+gh="cUd25;hT7\Hn$\~=?/_l֋AQXK22}Tίi]c|eC9?{Vkl.Kmom7ok]ﳻ{9}uׯݲ_ï޿˟ݫo>}O{7ӿzꯏ޿p?v{mo~n}ϐX9{b&_eq œ 3⧠'xY&`ޣaSВЗ?P6Gʬ&*GFGFU&$W X 7l6GcbI 8p\HsNR `BIbY5ͫXɠdeZ*QP^UlxR.y{df@FH1d^YQ͡BҰ; W} ɝjڔu!W)dglmD+. \M21 kl՚SWUmkaIVݮlE |bG5·hF̝t+:e@TI2Ð2%ꉶ:9V.p\ayY1!"m:ƃ--&VĊAE\;_DyN|Hq075F w5(ukrh,|un]jPн|_ m\]n]}^Gges7Й1xֻ/O&sMX6c3e2yx+ {'fBu/YkgȇZMDJ>]qn)xF(WfH9&,]g3^+r0FfA>堰0˵KCQnArm Z H'jw (+iz};3w4swPCo5O]ABLyJ7 B\z1샌 | #4@Ѩ_&#`4I<\W?5 1#9;\[BGȇct.Jd</זMr>r 9'΄/826iύN .xN(>BJÐR̵DAnu) 8-8f:@4|1^DIc`(Y^sN%6xN:՘yAdp:.\û MOn eT!q4جozEf9ˆuXɥv'cGĺJʤmE"'kO%7RG[d:kut%EgxӤ̞ݕā4#2'FfAVdz0 I q_t> onqS,ne˵%zsQ$oÙĵ)!ii(F5!\)jџiAnQ3G328UKh'E92:MQUd 𸠻v#KVb)GQZ*%nr`#HEѯkzJ5jdL%%Xe㬒0a~倵ґVX*b+'GB3d~-?[!y, g㘗c&+u0B<@ kZc<G!(e0>a HXjꠉ |54%{D/m_*bEq yՂص{$cEr;ٱ,Gy-MkouR|ךP$5qTgM Sxs*(uO>"G`.s$ od־ɠ7l{ϳ%vLHC0}6۔[=aIwrbN֎$*cكLA`]AvхA (.`EX4څ׺[*E-mܙF- %Ν6_zJn7\J;s92ܴ9tLӰE4-l5m<J2avDB] {:,),-b20*sr0f(ɀP) t+hv%L $,D"T;FtQ"Fh,`E2Yհ9?rD˵O]<T#663`B~lK$5D)0$*ʉf0L0& p)yl%Qz(M3*&CA bT8ற撯1MSXK@)MΔkKus>d`4ro^.XR#&ӧi9EZNTZѠ;"&|yδvMi7gΩض4b L҄́t)9(HxYxɐ<+f>m1TL6#da@BN:LB&[ T}6ՔC2_3!0SRez?9/k s3}N`>^fg?f P|#z4U3#R]);оUJ؇fӅ%pdjE{9@ g&].m|7@c "ntp0ПޠW]JJ\@0C%TËE9H ԚIr$VFg_ȕ;d;}_ 8΀r\ato-AU3-*0$%8 hZL'a!ؒ$u{7VbsnR[Z9ecRr]weis p !U>44ۨ4X-HXēUjMaOAPE2ׇl (YPȱf lZ9I0*jR  "HaX}_mmeLh{-tpAs>Ikg}&纓u> 4h:\Q }-{~hYA/+jC{1ij Zrv@T GYSyNvYʈx]7^PprY -vv!`):3"`3Z@2*5S@=cA F*!a9P/Hdg:6QPb@ C-b- DUƄ]ؑİXel"ᯱ7X>N4E5Ev52YA)" Wr]S擖YZKK4}D~cֺ06P.mL{ʖZU' &c? Z5+$Q_j!:+7leb:`H" zat\@:-L}hPQ tERiuȿh_^.`?UФj&>?LI|w_]]WՎm+30bX tGlZS[k Or(0*÷Lù]nJ}lhqXE҃hrft"chT! q] i49g[Yp{/SGR$u0ŕ@~v R02 Q"'p#j1MCC"BE%/X|5ܣ\pTl8eZ Q S# gGf1k<1[-QKgk ,>\&NeGLF`H*&KkeUbi>1if:5Z&+!*NRRcߠy bsIo=P3!ˈ*TSkNlww(#$B* ~ (:WP7$څnJSy|Ryy3Q/=+Rհ _Ӄ*a*xS3Q?fN^7,SN4]q9G8`%EwT1*ws .bkPMۥ#"Iۻz`=P@ :QnZ 7gw)[fe)G4u)#btDŁ̵8bi&-5`Y$E9NIXL\ a&} /[0xZtLv7o&={3`u$r7^02?zk#/U{ɣ<q_}HnSqXytFbg]Cs]nNN6;{~)<Hkk4uȿH&Z|aﱻhÙqR(V@9۸M-uP7]t <ؽA2ٚiC(wP2\/1/,7L(PqZe7Up8g:o[MOMdA%W~4.V򂌹m0ɇF ?g]h9;N<:UFbN(,/3/w$,~',}!/= a"VJ > ǤT6@>QVYÞUAPǻu>ⵜjLeq.vO?Wn抩m_%(]4gn*QQUOܨi5Ӳ]G\0nY X.CzH~2 Ec.k셶U|Yirҡ̔=~ c{ ZgZWS vˬ.p&j3vFص_R>֮u~}+{'V" 59N>J_TA]A\fDʇ'y`޷ l"&M{wѾvg+ G$ o0'{RĊzQQp;0zRziRlu`} ʝmH<%-w(_Pjx\T`^nG9wlKdJt*sҊҙ%:zL4]ccQ_9ȓGpkm k&mFf@5 T{1P5uI }wu-9LDD'΋20lP %ZK9-6-U90~bćҾ=2ƻoD"1Zݥ[g\el]c7[zU-E N>svA%XJO*P9(/$Y,*~kZ}e9j^r]EZrO?B@whӝJxnAK%3+Z6:czMZzvVԠ8Y-9|WZLq. # ecQՖk%?n^\_W!»ZqX0=j"y5%Cέ]bkKV7t`.U1\MPpֺ+}-+g-I9'_W$K5[8J:`K] )LKɸ߈a)\mS[tKկWڭB7I$|^1ӝǥކ ׌n϶.9kUdrCpGo%Mk٭䞎Vf_BC-}k6gbR}ߏ7d 8v,RdU*yIGɺ_k\+wm'tŵtm|\ S! 3& Z8M48q: >K7k SyؒXcaaZoMO63~Z[k?]OENluua^Ϫtî{K&K9.2z9]LJ~JWҹ(-KW퍳pfҍ3ж3iY~P r5쯝tH q7 7%cC5|&']&]/oU/ꯞ{<?yvT웧}xr2_=ᩙO?Çz_[^QƟyx|0z _=~>Ǘ7^y嬮Ӭ9̯~ ;}x+iϯ<͏/_>ۻ^_|?_|{|>~o=>zWw/>|xx&])y {gm|~{7|OgL N&7_?߮v}w"79a|gҵa#5BaJ߳,v΃8 ËBR8 :5 "rx9M2`Ul,BPD&I6//zYJDs\x E3MI 8VUTcH]ɂԠ'Ͳv6+֥iXR|IO:2K6F$ f*w 6gtꌪ4uV 6G,X~Vns'05U-Jr"9L˴ gf*#-r1C{{Hz{\ qװ`f oysԷRf @rDV)A*{񞁡~W`X"[^9(4RU`< gQ2?3"N>w]z8 FGI9&`'zs `"㐾tvnϋd fa/qtKp1EbN@iU_EV%9X3 I^2 SP lZ7Lr:Mޛ/=$   0L/rӼ~k↘().o %GrS`Gϩ\Nr͌I\uhX@vyFa-cJCq9]aMEZFa%+Xnͭ'LnM^Q8@(x4(Ӻe|>5q(2@+jzUf-C-YI&f3&R>剦H7)foϐ97§&2rgNttfS?~:xv3!=:ga>o?>Wׇo>Ǽ~oo3fOM\cJR@IZuHx~Im`$ &ǻ44 0f+l[0.߲}  0dO!L&iUs}ND\Q?lD_2QW=$lm(Z+fD`.#gS^zLyN'u Έ^MxYRet@9h}٪" 3 <Kw1)Mr!9YiPtďGToG$nHנzKRK>J7krD~&cgǕo 7l{kis]kBvK 5Hv5bEK W3\HU'|"$gn6OҦ=ape/<;<O,C+COs Y-8"r ѺU9fk[e0NG=;/ 0DwB8-j M}㓛aFf'XǮ-/Lq'/13g6 Ջ.LL\NHgb@IT yqCTq>YE^@I&8 ڎ>\BfeJU ̺4׬D I9g=S֡?>[aJ![s[rs\ӽRE lql04M33k!y@_$40(ıab[7nSض0~O̓ž EIT@"lN5wy7M ɫ@"囧]BWrVe.Y5YF@Vw:?]i^ڇ+%?>7 y^ɭ3,},OMS\\L = ج8MVKUtOJC1o61ٚjLa,3WҸ~q^6rK I\)UHFa;杫`sO)IɶuZLwͭcAkm3^O^:ޞӉLBP mE zs2 URSj6=^ v3zż߂3:_&R4%U!l&_ZP1[Go4)6"TGATj\Xu ZԞe.)Բ9:<#f-sxM6zt{P7Hԕ ĕ4H_,*\%Ӛdgt] $+E+Y7E2ҍlQKC9~{ti&ha2&R0g~!0Z #Ѧ.,=jY7_Ԝ&^(-Bۺ2g20 /3UC=VR1OFuefNޙ?)B9JL4I[jUeO>/x"hPB1*7D=ETWVèUvKBeH]礞` LM8腌v|ǸQ1f]AlUB JV ZHvuY)'q_u ktro"L" h mZp[5&l jוpZzrȝ(Ԫb+|Te0JS=Z6U ufḳ-jfUl `K#9ikJJ6jZhrO+)7yO颹ueGBדYk$/kHx^DGr qV@*iǭ0oͱU-hB_G#i;a,6.iP,΂drR&+^H&W u$RVtvP{јSGd$멁ђG`E%k20Q%$Vv8&ʶ9x$w)@ppȘf(0H&OePT" e+"x#Uu"kXi(*Eͫ';ZxKӺ@8W♡E eO;=|hb%`AE OLQT1qC͉E4qQB0vϒLk.yj5 k(Y WR0a/7XФpkbR^ŝ'Rjb(IuТ2g|JGZ"H a > B͛r 1H HS 9TdN!<=H}#>rE1C}WE/MpWb\U8oÿ=w~ϯ^j˚xV|YijRݽN?R6OWWD9ƿoo^Ɵ` i~(YJLe"l v]RI4B,pjmv츛9G\Sڛ"DI:p^lGP#Gd2 kݙ}P|J*wD T!W5z;gXlӦF&-uQ3I,B>Użj׵~R o/_I'*׀2n<+m@LCSAm/A\pAASsd`G6ƶ)B\K3z0t =\8.v%tz߬J w@\x?Hc y`cAlz{?4zGըB`L H~_ x} IG a^xɩDgJiQРwߠw~yx|vDLU__5sb,NcJ!͟Sl6fD LŖ4,Yq|-iqG;\9&ڃܴ9S~Q̑M:~b%ϙ+N| JTODN'>A=VkٴV{ޚ5mEI*6[K"l¼#qc.\ ӕ:A5չS.G6v ?_ lrV\*5pj k;TӒT%22e E~E=?3N /KŶVW6_DnWFQx4i秸oѶ`3mIȸoI*M SXqS퐀*ަJƱlc;պ@yIɏm) bXf*3rVB1[Ӧ/%L.ꓰYDHrHB妝p\IAoD@, WVVVRS^b#Yax81k0uC|-r=ۉv Ҿ7GCŝa97ue #[[(/t`r8峈mT%WYUc jWvj'z ޫ!Ո2~ nl4*TtvB%"8Kuއz7Д Ga:ᠾ dxfHثs% YΘ \Ya@uqs=Θ8C^ $ +B®FWգ4MKSHZ ݃\UNiȬROڒXMT1ĔTð3]$a=Rd*n[m\mq=MZa{%_yꭿ}ɐ{fIURs}#VWUtV)N4a!*D@h; ixm V*i,tLpvO飨 5$á8 U8PFY`o*9!^B5o-FިLCi:"%rj+6 MQ6:Q=9Qkk-noq[h}8])m&)Nq ~{WbxDʹUJq%Q(:Ce;ȕZTJG'DZ$|0r,G N;:!xj}BΩY(FRa{ΎIB2ڲ3:6t^YJ5M}0[2/yEc04tJh'wHr|YXi4f=@5E_^Fy :YȸV/d=G1kPd$/HbH<_S$y;ϝGZ [KPYa5]19#şZc$K5~c))#LSǚAz**]}TCC,iI@\]Uޣڔp7ҳ<n7>hٹ _ުgֿ#Ta- cx}v|UkN01@(HtQz?lM(coi8 |?9p@q34fTELT*b"4ZAp FoPvA,WRU_"r!d3aM& 8qƥa@%'<>Xeummw! 2C-',ݼuu;yxٙS3 gpCHK!*?Ō#ŕmsQ^E{? 8BS3dJ&. 7R"0=.W joBTRq3:+Աj #԰[ہiƚvvs>7kwL%pVZ# +ȬLJh6_>Ebde0=cҦ=[fs&MߩIgX2XeI05f%ږHBcy~Ob;3H #iԦG,JHx?L@cˬ_VҾ8r,>9 AORp8MPpm Cs1\\QS|jPAr|y꼉#KWj\ut}j{Y  V,AO,ϕKD~`ƭ'nKܔZ3u(SB/`@{q֡Txf~`Rah%D9-1Y gM蠡&2tO<ڢRC*cy+t< ʁNN](T6v*BRřTюM_ӤsVWjt卯_>f?YV"fK:e,AǻPDnHWgUAK:F=]ܗ^Z\k\A2yl*D"rȭQg~zr{MwV*-Dyhu 3ہThš_)-dnB+k|L^5V};VeѪᩞG^hgrV|X@B>#r`>xܹlÇ 6N!1aq ڵ#hbV&Zn'ݷEt0A%Fås IwH*х-@!M#ZeHRJ:t~R|(SҰ2""qRX@{ɅI\ m1뉾RC|X^.vH_D~B̶ZzЊ#-L!)^|Ñ\C 9g;Ȇ|(5jP'CHP-1+dP/׶[,w*X O}ъ\,뺳9lOuNƶ籞/!-Y%%g(:">̡P&@Bh.8KZR|j<&aZw-ݴJiIxɃ dGuiulXD/`ZW+BfBf9H] eN.JKTH]#3eUU{0,%5jkySKN߿:|9Jyѧ+ Kq7}NQOUs!5fvR2n3A33%8TtxTQJ| T }EnAx)t經dB>З֧M~daL1FXsM P54nJ.溧rD] kչEI1așu׷:_Zkn8s _@2>S~S_ Q7PמkøD˨,~WA^{UE~dˆ,q 9}R 0IQ z2kdQorY*Nhj ;u6{(Y[gnOJs=6{n, Ur ޢ{fd8 ZA.F ;Ӕ`Fs&h\]U[n/m-|tBZf$M;w9ӌۄ n9c_.873]sa4ޤA[vYKm#4;jSJ9=is}@ 33R+~й1!Wrf=.4ˠui"̨jl~ 8OD"LvNdrsRGE>nzcy*C2j١|B`X=\hWq 6X: /C{Qk1S eNNV[/Zv9AɠzX82/!UohfEs+[yW>|4>+zQlv%fWZt]6^T&~o2&e;=;.g:oоג*OKS++ TA2&WK-P"fTr<I͓2c;^ dx$w rf 3QMrl?*yBC\7}Y]-6l@WudpuO;%Cͪ"\\\ݱcIGk"YW]}$ȫQW\՘)_>c*u_qo*է{t{j.Zt <2`$ R^m|p!Wj김K_c2OU^W%j5݄OpOZ@Z }1A pXQ2{Қ=FW^q5>X6I>.}kLﻄt _5>5)){I\u\XzЋ2Q4oޒޫ%=CÇ9ok=ʴE:gM>`z| }N#ޕ.5lZzFz|vÎv".6}9ܮ&/6Y-.Jg|쉇=I?I.NFm6\:=vo4v̨OWQʚDgJga\Tڴ/2E N`| 17:h4qg<4[WP{_ Up>Iy-2F$-SbtWz. 8t  t.v  0 MDk; 9cp^"Yқ|E(؉$9@ F7Y8i@ OxOy-*f= Q盧L>[G$IFFiQ§㙧c IQ6Kg'OBkmb.x,cZAZ=K4tV#$A@KH7Kgn@)-4nZ6P@,"=O!(ʷy|d:>I _IpˑB]JK?'i`'hay67B:ML+jzEh~ݲ׸#t\'}@T&a=.z#.=eEQiRƲ@DE -ohӨӃ*[Jµ˚ӀquOq.ѡXsIۼc.D"5 h] {%J r&yMēN8GQ1b9"'*V,.Z& \e&rd$m4Q@% jmj9a @H@.ыGK"u!(.mjrw=. 뺹Me@n vXTV٘f) !!-Խ4^e Tl4qj$LXk$9J>MQoV 5(;xβ$EٵxƋqys*C$kaߓK cȯWQW?K,T@EJz2rI%2-ˆWxMR#?@iI>?5#!ÄՇ+%&> @MNxrK 1d1n<#edef hd2 o0l-@ bZьe7Iɀ>I7(XJ3h(I!xZuxC:cw!6bL;gYsai#:.b` ,W@X:|JMq!4HXRM%MU$y/OM8ur[`Gv4HX]1ultuV.+dRAEpeyiec-}a5 s9ֳ|n"`r $O aP/ؽQ=ꪳ Rcqr!Zf38\PcorHF /$.vZq~yuŐ(/*i;+ ( ЋBh.[% ?+Mp dɨQI,0=W(e6Q4%BH=vLӚђ#͓|DhSt.P$#,H>*v<]g p5vlE|"#4VPeb\(:IHV7YeIaP;cū<0u֜C\@lNC,?@!&M('R@ߟ$||FD PJ6gHAm Z,<;B,B,ĹFb|`NӺRHE^F~zzqr)ІD"ŎH=hmҚFIAwy$~  @( H쑝n1w"Q- 6FOM@f!gɀPr>:LKŸA+I@,J?[^ =S@1G7i^f35Iu4rz'G,;FeC;H s~zeL'ӂqN$7w$l{`Dj$&hP4iKmP "#)N%B -\2Ҋ˦43ʤ)pl޲;1 FKM@[jD$-B?B,/ b.:SG-0x ɮ/j! ˷djW46P;q}ԕbE"][>/+E&C*Nϔ+ξU,MgoP(I8/MIeFq >w3=V V??^~摶*$/=zg_Jx͗"Iӿ~H?xݫ_^_|ϭ~/Zᇻww:9>~͇>=߾~w?<'MR/z_~ᇇH5^}2oݣ/Oק_Io{닿_?_Kooꐤ XͲ2C'@Cْ//'mӻQ߄l`|-X E)YJ@mڊ(6Q/&1BpW_@/n SrAXR 93nez5 I3NҦ'h1*FwٺtQ"[(b{b-xDA!Ph5bd9z ڏ%3C/ȕ7)e@ _p* u<PҠqyQ"Jw u@P\0pf啌$ !Df1,2$l97T(oA W0H/;Q<,) a\>#V$N/jd 9*?Yp)zxBĘ H^@ Io656bBPIgfMn.^6li l+WJavSQ)oT\15 y"ȉ_!qCS gJ@b*w,|4(`=0hQ[MbDUs.Z2iB ]P%UD3 äcz(e$+b2cHZeaUᝈ0^&=G5*w ,ћM"}#"ۡ$u+Tl1`jĶ̒aC{:2UfS)F2ha›H*TudŘ(K"car'Zۨ2!DÆ_~MqbF$mxIӄAuuUVz A"Q&M ;":(ђ1n5`̪I lZY 6 "kAYv JZB$ i+d\aC945brR)Ft e8^-vBmq*[Q ZU`T(O"(GyC9EUFDw@5 ih"3TxyaEa |d]b|8~B!ʕVhv.AhR]GzQH_"$Dqh$P әU(,ڌ!yCkIL<"FfF8D?hTs[3eGAUL1`$s H7t">Jcm.wgsK$_3}b i^B-Ƚ(0 砍ږN|;7C.o մ*ex Ωfgk'l1M%ITN q@MӢmܐ@Vl[t>$QK]G۸MH8Gl5'G hr0ʰ eT́x?HHq8B mӄ|f`1}i6q{N["#X3 '=g.2GXQβBA 7.`3$lk5X;G;R$ eT^͑=kPvTj ;5R̥$02țM'S5]?LI7p7&\*m")TChLcRd35pŞn-*ǝv%Qnռh&J, !/W!&l(|*SBG}Vm@L0 mg*iJp nֹ ^G.lG-zJ_'j,mP7.ѓ OWg) Z1"H6 g/* *KZ uas]z9h <$P)\ k&l9K 7M: UR87H52`-ۋs$ewy/Ó[kcRoP  M!Ku fY>cL+91xF؁nb_p~S8`uos.dC+N" tO(aL][;+"TWv +BD$S5ܑe Tţ~(X5ŋy0SSp"?W1VL.j*(HE t dE ȓ{\Dm"a"Q}ҵ%@(^NխaX䫛PpaNcbMe"(GN,Kh<ƙZ*rR\"W+aAe >Yb553|j8,ڊgaM=]58~I,6mm nl B.9B}ݯ?#Gss̡g36mg^>t;%cC)ID{u>ϟ7?w~տ~}?R"Uj~ꐱ:'OS9kBmE#JI{L)aڗǕ OkR}lQ:2C}X{Un4pK)6bmM%NsDn嶩TNkd@5Ky9‘^ *VGvXrQiuQr6i7DJeַݹ{|ŖMxjW۳4^N?WN瘀QVv AS]o(%- 2iDH2 V{0 MVsQX( ]P/CFVU.Ι+vQF&j(wœog.iny|XWؐk. d.ِfK FaH8n\ۃ;{gupkښWU.|=B!rC*ZcVrJLZɅs%ĀR6LZڸsc٧M+ЪLw~:+"!_o:̊_=wN?y_x"e|x: {/g<~^? ;' O F66} Lha Zk7x~O>('{vl3sbfG.tT<={,4:Yn ֆ&J>Ktu`ȶKUORxlc&?{? P9ۄ.A*- ݲm[5͟6'S*duWu2Ԣe5d_dtU*j2DQl^x*ihXi3;Nժ'M괙#[gn  [@ы6mq<rCqH+WGUhls:G2#J+{b蚖sxʥ6Q}(AÛ=(*#q%iY"0|or6 Ju]g)MU՛Qtד="CZ ّ-5hQzpr\ϲ82s:Dt}٘:^C_aUTpق5F㈨Hom+²IRS9lz|BvTfj݃\n]F'r4'DWkdYSh}7iLr061DY!x( Eg<0Ck( GiM~o}H?yb_}" q#qpT<c8IY␍ 96j07w‘ ۑY9M]uVN;:&w3;uL[wܮׯ7ԡnz(^m )^W HсqAoĄH7Agm3IV~,[MeNݝ4'n(˶a, ȆT0[ބ~{qЬc: iu~3|;ГnQ7.Mޞ\L%jg$E|LI0)b4f5o>c !iK&_8DnYڶmvm;[uhn3tTy9\fqnV4G+am_.ݺ-=sDW\VW/)0#;s9a[ ˆ-(mNȮ_>P͡W'& 1\)m#ss=:3Br:sZ-.w/ jYHz ;o˜%<`e ay}"l'0sKm;e7l<7$lP4~q qH391$FO#yЬ+~" a_f}|-֙f:ɵ?Jp,7[DsDLSpD AU?h_5˙u@i'M@Ł)}G%{=m39Ն.ksn7wmSoZ%495FjM5(c&,tR5Txv@@t; 됚GۯCٮ}$prTo&\vhs:qQ.pQ`+gK`?+, (O8`6zAZcz}iV+t@4]4fr9jmXpQhf| <@Lt >5G^gkUs''FGP(:ԒGs! |ڹi&ҰMRc/!S*z/:hxq^"=}~DkDߣwߪpo_zW?}x()P~2ʽ̶2wP(rI&j=-$!?0/XH943,z<jt< 3}(薥*.x6aB\_Fu|hk!1LIj'Atttp&.= v) iu`؜ШÙ`Sܠ93b mAU/11;lcϺX&˩ lz˥Q AYhN_U_Q }8^/M3j6B' vmRf@zzU6 ggA[!_ }̃i_yT?as$#=* &kk;P0!+bG19} Cbv6n9nρ3}ڏAun7:)&zhjz佾ˑ b yFJDFX#?F~78kIc׃Q]$"D6[?Ȅ/giIJDŜD&'nKpGfMBHr@a6tFInr@+v ]> ՗=h" +}VZ l?gϦg^m;~MX63auݰ,F c>@TQ%A^.%2\ lfrPya%@7vrxq4vRp6 -綞؋۪.M 4Mط\]#PaXC\,I @bnV%k؁c7GBi”qc8kYX|&y8ubA :AǦg8uXA}STڍHߎgۇ&]M n}vj@4rQq(iEA` 0n4vЅR`"K^7g%R|!Tߤxb=)c[_w!e@T6jLHrjiS]8]kZǶ#d΂>h76=ad8b#OlNke5qm k'6xpFnuzjnB~L)^[2p٨_Y;#Է:jjFd\:`??:eojgH!ZnaͶk 2[sDxOvj_>|n3}.س۪&c K΀JuPğl4g aW$;gxѵ3T>~y⸙p=k*$*i\` ӬT6}NqnĢܲsʞl,w'3>C{xBejq[ NTw^~ҵ]n(~z&ukC<; ]́#TGRDRTybo0W}^\TZڣxq!ϣp^4$ѣBd<1G,,b@0ȕTb|ص\&Iʂ[ %Z=LXڥ9t]>||Wtx&\yW?}Ϗ>]Z[~JLKWoӻ_o_߷?t׷>ݦ>>~Ǐw?Ӈw{Wk7W?s7}Ot/^}ğ{?gݧǻ7O^]|6|/vo?7op7?[uvR\K>muJ!_>/+m>_]NWR:C|a2KrO* {*C깩Lq[zd}Z?/+DBk;SvUF@N9>縩 CYu:v{d:`R$x8?-ڧ/TQe1[H1/=r@y>Bʪ.\aO.!}k0vꢍ/|aִvRU8ӤT!UP CVnDyiC95+UJڙA椇i;B"]] cu,/l `$|(_Q퇐4["N%$#S ԧ"AWt .o Xta@9s'@ERe$76( -}~L%^gT%<+M @i22~YL2D}< 9|(㝳}S/Jp6}{ -BT!ܘfgBZyܪ:(8g9{YːFn+,)9wV 9YU,!l@6O06-*")vea<,QpP#ژSAa s˰ k0BzJJZ2] aNOHr5$v"W %rX4:~gxi<4 P[2^mWiϼEaP *%\:=fc[k&l1S%toOi`L&A6v+\{{&fzIdoN(UU>$btS)ފ*ՒEϤ5ɝagy8 l> ,݂&G{rw{Js^a vL=pڒgȢ7Tm>Alq͢Y³5|P"7j'y8)P2azty#$Tnj&a!,=$Xo'P %̀7VlJMQ:?aA|&@!1nip}4XQ5޳(4{v2,HJ,$>rc2o Z'?M\ 0)W2Ƈ(H0ʠhDxt$Rȃe" P) {> ^_mڬmt56`"3BLȜmMbK_P zp ,%@p 0rASlѭ!W Khժ@mR;BqM}WR2KH=W lM:E)ԩ,vA&@}3ң"Ldxypo.Zw.׆@>AϞFq_^ۇ7Obɫ'ỵA\] 7$;%z!rJ# IЈ-utli}uF$+˨%J"vj q\ka-,GDEhu(VKbd2l-3Hy|+Ah\QgLV]GYS 089f`\]mzsaAG1f,ryt27G$9+!/'b$Rxgޗ xXʅsL6\C끷heɲhLڜ=-6VSqbg؝.bsm , ,Db{Jza?J0ޘ ` #bfWaD4b:Xc1pyVZM Cl-(`kɄf5w_*I| r]iBB\%RWP54axZLVHUyaBJ2GQ3h P^[F)pƚRrvyo ɅOUZDƥ2EDg]kB6^s3jZ)H͌^-Ţm׺G5 H EŻZX~1)0"Gd"-À}a8aKgU5j.!TUR!suq0Q$҇6)$3@FPșPI+婠ii9'7 wwO7EA/J+-[o>eP|A[ JY4}HxIzI$(T5%|4\^v?d[}: K& +8S{?e&v֙gHYkMIE^bp?_GtC!:+O/g} ag &XG:R_ޗ18uHȠ~[v@oWv_odЗD~T}HQN7m層m5EJ %b\^f n \LD9sFb@Am V',H @q*tw~ֺ(iJr'EShn"&,qp_ձ{ݱH42ҺX4e :!/͸b|j;}f{#?s-:̝H@3lQ5پphfiG}E#D"`X) e;4 IMݾ4ey{l:ck`5;[zm߈Ո{+ܟ^5$i`agRJtEz1|cyItc1mh&L^Zrev4=2HΚJ!on PLj=:]YU}A{,]+A`5I {Pd؋*c^uȉ J$Z' voHifomɪ {yu IR߱QccoFJ¬׵WMEzjpB uJ%ްzv4]OxbY j!cBhhycDd!ʭ1Pz{a " p΀nWpS[w脴&IިHGYTlR(I=NC!`mX)6Gt6laU_J̀N70q c`3 Pջ8I:!ٍroH+9_2YһN <ƒ&'OpNla$Pfz>\s%id&BLS} /׹F rd:wQx<.Igހj[[XW[Qx(OOhJ?Ӏ!Hg֫ahΕгh,wްsB83t\j̫Ke۝-b]MAd!qwu1\_`j\ = G,I`$FAϐSwH`Cm:2FQQ.i6 GCy6uzÊ6^jO`퓅DjDЩv ױ)ӡJ  2?9x h"XLYZ3!>KO#8Ϛ=Ѣxr5Ƚf}D9"9RzVV la(x&؃ %-K*ٷu[wԗ(=*҃<^} @3uJ#p ?1a Otp(~,D`;'Ke5[Pց2 Bb`4(UBo BYFš|n98 ҝe>]/oї4\Hd2+2 35Z'w9\}#$E(tb&/#&dZwDA7M\ h-_=P!Fz~&CIڇ 2k{lQ KM 4yĹ9&E&̉>fB vXvv LB΢pBP%",Ԭ10e|l  $6K7$1 m9D<̻5<g szM,`A{ċՓj:abgH*9μדE{E4-~ӓMFS;Y0ȕM}cpViV6 W ::o˂K@fH|#`{#95Ks 3۠I 4}(ذk<:Y?Q7#4أe iIV 1%TmA7oӚ? H kf@O~99R.&I mzPMޯzxIBcl{E0c/;?ssa 6跏}.98|"[an cCo+sTNkF~Vn6C .3ҋVrkُ-&iϓK%)LLw$gI`vT6TtL@:u4`J_گd<]>4'jlJ{GmOH#rl돢?tQьd)[S6b88A.Kp#T]L`C;BvHtfl7=+AoO]*IB XtQR(Z  8? @$f^wM%x @$ufI<ާF?=ܿywM@&%7O_ChwPs~ndZi:3S-jZa@%[<^O_o)ѝMt\ZIpL\(& e] rV?2WlqI$y:VND+9GkiSQK‰̸eS4s-ɚ3]ٴt%i;GȸElù1]yEh\tqI ǎAp* xiΉ$%L}fթ({mKUSϒD9YTy6lɸ*MzxVgϋcOzcG%%lLpMf꒓#uÖą^s(red57UaQ[fy=~˫+ɴE=%?ElӇ*`Kdg 5ˡas:݈yjZ`IJ ;̸֤4`tЕh:i#]R]Re\6ͦ-WZ,S&fƹ]]ބ,! e'YzvKEehDb8*6h"AHSGm˙"$.DQ2U3qUf˕' …{P5sهI:Lsդ?=G|6Mַnۜ؞}r/>UoO~{ݧ_A?>{?_K]ogO@\s 01;H(<*XP,; eG8BgkQ ̵)Af[1zbf՞k^&6>^ԜC$CFPㄉ*o E %DmtVQvyK )K2Tu Y%$skSى%*mma@Pb8Xb3efXy^ :<yv@cQUر8 `_gFXMGn;jE~ǩ]H/ո_3L"M&Nk۪͚gr!*|n( "q8iǧxR@kEjDs#!u4<~+w89 bdpI$M&]Q.(9S^s*M-u|־bN 52K|H\k7jӅVqcH0.KZȚYn>{&=كXp)7 WUjW^9Jm-'r7^ NO@AMa&eJ P 6:ujxڰt^-_@ OP28F pT)8R65֑ wJ8t*&u>`r^Ί]-д$#LI {%c=!^9b)3cH],'솆gc$}$1&/62O0E`gz`3(3^B$2 *dh.v LtMn':̋gAƹ-Lïpn(mS[ Ω9MD6+|.fVE]xcDzj5wA7ȶϋmpX`3ڦK #=qr6t %CI+50(93G(NM3%T&doZ*7eQe3M /Kī_>zWߞ)Y)3 {rL w~_^_%f@R&Ade6,T;I}6afHA 1t93ta!ISE'oid W?L"ea 3ט,24wu k @AHht.E&Gm6Pǃ Xx~6#HP<K51e乚erMl nlv%M*gM~XZ?0*cr;УG5n"崖T̈́o``;A3 hLe<|Y{d$p:-7ٝL{ @[t*NLER:Gb/r7^6cZ\הM%tGgo1419{8W/M&'5B2=5> [7u0 &Cڹr4ݍnf͠d8H|wf*6Dhю7F3RQo:W[;[v̘ʍL23 3x5v1 S{hDCifֱV3dˏ&fO:19!2ϔ%=lXo88"?szsi.Y.4[3kk̅kZ~sfe{>t0_?k"D`*߉ MC p(塢M\ϘƄZ62Uo">P33ku8o e6;EY#Ү~BNg+*ٴY UJH>-F -#kVUAqK4EKMPLtuXhXP9DF63u%RѐGLmX5ɖŰf0\鈹 m4l pjw#HO1#5ij[ :&lF1/8UYݝ;Ibɾa!UTTXإ06lGE)܈S;7q)iH15r`oBimw=:i:(Թ`<P X"3X" Xb`UU{ui۷oϔ|LlPw{%iCTϹ ,in>)~)ls T{RZзaz!ЈBC 1}YǑ3xZG/Ǡ6% ȜGC]/@KdȬ<n̪%2/F?_˫vW^ wTT~%e8ƫ6>}B^-ヿʋsUle_t6p&?"i8~<8]z*M'G՚:i~riu]0q<.QQ5\]Zŧ}cB{)GM{XiTT]625M]ʓW>!l>)'M>",EYcxuآ|@d~i鯷m:.鸾\^/a2~i8,䥆Kg۟(+gg*"\4a*mZВW (,8dڌidNWw1ƍ]y tBk߷"y !og Ah&( 7 0gu2v7GND0K tBEU 77)cQ9i5Щο/J<7 xzъPR␞x82RrMzV.ۍ[)/h]w߸z{*ؤJzWm(~SM 9Ҧd=h5huKE[MVm@5gG4]]%߃x\Qa:s0%u&4r)l89fN`J[0{@4ؤmSS L8'&KPTTSk N(L/,{ip\;.&iޥHQޟƾ8) ]i9t79]~:n =ծI;u5$D\ɮfvd2.a:ITL~=9㥢IXꧡY72tg$gH #[ {Gѓv@$wnc5#}n Xؔ~[oTY5ӫ*d|}*g$(QzEhcSWn瀋&n{ "=}%ځu@M0Vd*%ihO0 x`I 2zl|5%v|lb90k'4j(Mȃq¡LїmF <{Ǐ7ߵA?'K`^t;|x z\?_{>?^7?ߥp/~W?^?|]׿}jȠBb8,Y3a#3lNј^{)ղ\H#q]sLI {ƒ)05|Ӣۭ6[U[jOI(A8.3YtpPtpmMD+'W`b"(4c= +^캔,$x:mg˅D,<7}#-^x]JWTU Oq3T̀t2Co &=bmN4RVU+|>bۼ]h+vH XLޠ,(Mdy gbJdL?fߦ YOQɬj4Wȍ Yox3^\3%KUJ "SmQrWR4lOXo 귷e+3b}  (Q][ܧWcb!Kv_ ǯ67A -&l`M1/2)+u)+66Gݝ:֏P`剀[崮^@=e`0E܋K fE;sl\@!Ӡ7M(H1 BVR4Ab@p$ҍO/TH-\3'(|U%Ge{2uvR]Wt c4;M"/1 \P le]Kw6h]vc>}ՃlPPnhTc5}@UoHVݠ58ҐIj$S!QUH:)*j$w6/f"pz_T:Ҩ/Z>'cA=Mѣ2;1l[k*Dt jc X0N3M0RUCfv5eSPɥXfhw՚"4,oȶ]eՉsizdbYLǚS#μ32l̋cu(yL}e7$oH3e.4{u>˲_Iw:_1暧s-Kv b%&V,xŶYtMe~ŔԽrQEb Q"Ah\tK`MRˡʜ!zDPFk)P$ws.dwg=m~un ~woL8C:t8,OxosqB5C/DnڬN|K)ݦbj#׶]rw4n Pۅ̸ nL%Qky﮾I 2I2UH @Erb--S7׻7N+!{,PJIf{^.;XFjz uA{DNȼ:M[y*zņ_L@"M!C%E##Q̀쉸ڍn^Dh|"gYh5w}".}b RVLf`=`d{p\X ߶k[v)!RG6n4V9 GMw0U͌MKVE le؍frxhdgP$ҸFyH~J;e${OyBz}ܮ@nE* - .=rᇝ/wD.vcS c33dǫl,$&1݉յLm=^x M( mNGhGYn"XAtEy'BWuE)JX$!NEHXޫ?K.h~}~hs1 q;֋I^߱[#tOۮDGxH7eE;Uz x2z ڹ/xyPN VX^> ⡷;]GXƮoADoJ^Iď&FurtwEsT%6b̀> =DC=w$ ;B!,8I׶b,|  ve#@;UV-t?R DuuHō,/D2 O/ wzl }8_t42X? 9_*۲ޅ~A@BFJ* ΖbjiV4);JEqbg4^*?nQ-o9`zݫ&Ƅ)QIeCrKDS\ @us:vX a ev$`ȮN=6o"cT(xŠ-9lyas"؍msAX xF7YU1=Uhl[uh40R=X{a [aqSM7cLɊ(E z{h><{UήD[?|%?~zߟ|^?>fg퇷?|63:~Ә|z'XyB *?-_jjW|Q/mp[ _~Y|M.yRҐxw0[_q[QUK ʏ%:ȮFsHø,VSo8p$[|E'q~$l\2-Fٵl aH닌=0b1sDTpFb-I\e̮bGSL㺏/-u>/v02˧fhq6Q$")a\lK[8[V$_r ,#Ķ--r@}m&8NqӸ\kK䎯S4hݢuU@WW̸Ze@W+k_/uZ2x1=U Cs%iR+9]{;DN/0$_ aejnH ^=Mx0 ^wjĽ9oqS2 6Pxjf2E6n{>akFb@~ \WWFÏ'b 4؝d$8=U ģPw|mܙC,؟&CZ}t)$ p1qܮE cPpFUk`l}?ssp|.*}O(p9Wiؒ~i a9n]l<}pCgqREh(1gE'VJ-'K<{0|fbžТ3qqT۰ e3̂I /+C S~Hj˞Qݧ_h^ki뿤 )C^×/˧սO~/?/>~yxLǽ~S׉;4͍d{a*-l Hg9:h/K΀^m#R)7lt4.,@\5US%YOO-@CQt~+l8Hծgirvj^=ҭ܀v.khȳe@ri]4[ ,ΰ,/U]Jvz[WWu4E4שQ?3YpF81Nj *]'}2TuFD?c6c*^8e͂=1[|10uB 9A}Aеf,s:zy/#q=H{60snpX{M]v*씭w$ܴD`!x"bw:3Әb/T}Ni1d/1MnqaeS<ڲ%jY; fܢ` @c~0JFٓ4øVق i@ݖ&>bNbi$Z1uēb+]S ܻ(H0?5Ĺ֒X3 =BB{[]XMYη=raTQǑLfH06 ݇Xja^xAܜ 펎n3$}Z@bqN\Gb3iE+]6SqךahMŶ8-+˖c΁n>8;Wō^Y,őW<(zpm%raexR"te)Ȋbih9+ݶ}乌:acx`x8J贫}|Ք j4uށiEsd#pCiy]L\$r`Vz Y>@FAuph>#dp Ab3i SC~y,rv@<,pq8nPE\|0 ~*Mݩ=yH7X식pQRp =M65& z{N tN&~8~Q!x)U_?&^&ݿP&:pBغMLnPI-ĻkejgMlK *Y"V1nn2-:T8~v;;8 U8a. :+O3a^4BB_8s90(Kܢ4 FsJ8.cӳvNbFdRxN;rE,xT E 87X1auJ1ѕNwׁ}vmx#60ٔP~/KWk8PRYEPU$?iPa;NL7_ʒfb2ܵbLeޣ=#7~-fsT:BDKyڒy rXFxENhgϪN^b-M4 V2*4&2{{>,3Fv $k1,8Ps".~<扰$q.30? <Ÿx돦&pPZ!`qN N#ۜ &|dzhEXFm +H_ Yb_){g^B  7.j+G,P^+ud餦)^w՜E-z>5د&2Ti [.n(We!cDK\qy<yS}qT\\,:4.r4՘`DA23X -ؽ:^5q2 pA5D1ba90`9#nNu$n&Ԝg!LM&j4aB,%j Hb/y*"p- ;= ]xri41g/H^|)J/o464_8MwN*B^iytXY̤1H6fQ{98%&/+1 Ld`vQ1`hW3̶12Ay6R<2A&&P[8mYu; XÅ@2~ke(ey;.G0i0co߲JQu Y,һIj5D%s2??bc*,75` CPCʮ5yF1xv`ך4 ѵ ]G qG,"mC]`)9]` ZEhbn9\L`o!ȅPDG.nyL?[iDrp t]pY*i/"aXq1F?+wE y-< qF'ș8g$F]]t_E֍%4R!w8o#S{b=9rrLR2Wɕ㖆[r\9Z3i+l=*`]þiWz]$sM6b8[,}̏c2٢s\!T% \\i~H2zL<=o7YԒ+ W*zCW.9%[1h4s& cDT8lёLoX~6øL<2a?-?+NĒ<w. Ӟj y.Ԋ@v_*\f q؝e"Ū䴜 us1٠ MR Ĵ2qCWMߎe@I 1Lw5 9 qS3tĢ`"1u0X),8jatW ULhBe̾9 p{l8mDgE~G&Kv1@*صnϊ\E}%1\ճWLřĠĠD $RWxK޿}zJu0kӿ}$yG+^g{&: iUV-Bk TT̹M֠K4Y;u-z,K1h9e+*r wVƩlK\mgֵf]rt?kEyҪ\1K~sd-G,ʖEQԤl_ mV6 ]tTѮHZ3ZSlҊU/jI9J Vdvj)6jXH7"@6~c{yj4Jk*ui]\-qXǣfӮSxa\UzDW I;~-T0ծ1E8cœWdajs WTw=DbZoatd\kߪ8@p؍1?lI/Xjٮyo+b,U9MAMh @$W~l`k,ր4,K QnϘnB^uߤyOv}КH$@..hBvSK]>Z{^p٘!rJ+DzÂ[Եy&4gU?mU!U#ZGGe]~q\z sұAI6_qe {)nKq[K%QDAh ߷p!:+!zJsVE hU$6VjSHٽnM)S`A(  'K!VmN?Knr|TCݙ:BllS\\GhbjNg~Uɧ"8)}sw^ xTټٟ=*iE Swvf"5#Wt/E\Fl"^AH?__ 1=U9G?_+??^,y R[ĚCУdPjoIYTt4rv4<<'x~wljtBUxeMQw܉1D\}`S4 2]wҚv՛1F-m6Ӵ֙mM?1R:i{QP^s!1*Rd(\Ig2W, O tVS!E`޹bQ$m1DNڋ֩QN/jAWLóbO'-e#spe/|B!{1T􎯇f$U]e0DI :" 5v%m8kƒ>D‘j !Z+I5B%K>_OwamPBv$v(`1pɶVI~k C頝/h[;p}ۮZ BgA5R{jt̩Ujfe<#XݞlDt S |;ZdJ^'b~-į [ yKZJS5-6AIΎٮO/` E7\DŽtWW4 Mt] $TTw``=C& &è7 7 ٣tSUZЮϐT۹ dS uh"jSMKf턘 ݩ7MmiDj:hbfܥKi#JsjLq(D$Sb"h՝ ICQZ*);XZaG"bdP6aghٮl͖`xi1y}>YSuW\RS@DM.iX%w̒IP3C|w5aj0<4Ų:{C&>'v;# X6bN%``gbHTf_M1$u56T Ķ5wZv6B%.}5 ǶA )IqmLI4J-QK*l@CksEDs6jeїB4zn;23,Ϩw9d]ݫ=XQ;]J;7,̶cݞ5A-x\AöHe? n% 1Uv fkͶn/O*ȓ/`_m_k Vm)ǵuض<"܂a6Yh562>@ܴi\1O2`p?ك>}?_×?=_If͏|zaٽZ9,^c)6-CoP%I=5xY+L+1Gb9 q{cg/fhm[>ʇqUC'N{~qZj(`줤U, eGZ&[JџAZ+3A!);UP'J?k/EEVk4L1" ̬|%,<؋ô915NW@Դp?Sʾ_ Cy?'Ix09&VNJk<)jp.6Cl\<.}+)6+Яӱmj8 %P}^uiH4mx6agl6CGy E7t6kF*hh/uBC/}[7x%ޙY 7P-˚jkg % 'd`$lw˪%${|q~]6˵vYzu`8u0.ۮ68gҸXm:^} s m]\k~Vݍ^+Mb{z~.q鵮t [2õFoS2l8{6hnY6 n8yܚJo4LLWeޖnېZ`\T:ma9<,6 EFQt:6jGGM<.M{N :Xf7۫c"}00yc'N܎K" 8kR!╱J?@U ^Iӹ sp:~X~MQDEUX*5#ȉqKF +$采iy#IZ 6uuٞ ,AI,!Tj @-i_ꔠwkؗgRbjޖ/5Β`To@AYӔ3mo̊)N&0 y8G@N7ŏf@tdJO[l]vQ-,8 ۺ$K΃ZRnߤUnK.WZ󗫠_ZتTvC aA;;mɾ,󿲋7V"(p&5T.)4iqjXRkt&"^{h¶PT4vӼ7=2۾2mG>AD=躉 Bk(d^'6hՓgO^n<*?|2_Y7?{ÛOϿy۟Www7>=_~7?mT+<>>~z._o^o|z6nWWo_WeM#sW}~+ݶxه?J϶>}z͟u}o7>]nz~f)Sv ;I,Ӛ>섽^m6*HX"ڀ:řXm6[8PwYtb@Di h6bO5CUbY`0^v1%ȤN fXk ^HSvʭ&>rApT*݉e5Um|ڳJڢ~7u흷0 6* Ѷ)d»;QKJo,]#Ҕ0qgl2pSQ2&u^8ljcZ1/ե&M;Ddՠ5]GW7Ϧεi,'o}X&0M;!n|T1AAOI SºKԘ`u>e''AU+o5>vAΑsp5,°&7p B@qA]rfM X[w۟;y]&qᓢ9eyLg#ovtI ^Wm`i=Կf`am6[*FpD`-Q8Qe΋ֳ3ne43jBr! @ȺdXPF p&\ػ4¨٨ە~I (#88 5F(6ł&{MNxzPQS>4gn"RC"_4OKø!f%P1qnl*؞xX*U-}~wbuR:x;6#3@NfDhc{}wkm)""^:+w@ fI*Wzc .xhW׹М*|l1C$"G4`tRrtg#~gNĮIGD˶W!$KZrXDdĸW8&\lI4O,(ƬjЩ멱p2lYp x+bY;}X_Lt\?P kv +j!c2 lr]jηdPE [zIHD:]8]* Cx -PWT΄̘1XVvmkX*D;-A'[$'Wv[05pلuهdW}L~:lOtWxB*>_=q"PL"K+,\b] lv=RN`|gD=+6+/:"~-Q`zxfȸ9tAΈNeL2a֪WEJT0@% I݇^m'MSJ,^~s䔕Nv VVKj{ ,-p|)^R}x߼~pÛ-ŗxFÕS-e[ǔHLz/C}p]x\8SyuRMČLȀ5b{Yw!HRiAWW XйH98 F?屽G\̱㆑w LM!+4zd_9b^uF Wsq r ~O*Ru"t[-h,ƒ6ҐBƳoƳPP5(}P0ș>X(pgv?;)H-ZK/5H`,z`:iuM?XmAO>1V}\EϑW+plCڛ}fimL08&lc'{v:Pa9'0FJ);dTHXx˲Ք"x9aV;ɜgζFg[J9t'4E Ӌgv+=mPg ;آáR#h0uN͉R@."&-s?ʊ\ΐn*)a ݽܞ#%|.8d)s$ DƙEBjHf\F2@ˊJv,]mFy&o_(>K 4q.v"Cv[!e9w*0@A[/vb gA(LQ c - >-_Ѐuԧ$ng?I_CDdɂ% J?]R&hn=3,&0PHjӆRT8rEr7_op P!XIEOX\=y'OW!Ļ/)JVB VbWbӳW/}1YBz/.&y&߿}sWIkO/Jgx\ /G9R30zh}ԖKVL,|ӔX6 5@!Q 8VHv2J#;-l^ʲfgdA夈ER 쉕tUeiw[xAL?= "PR| %U5Ku XoD3|,u&VWX&[Hʂ^pq痃loټ= |m%WS ZpYi%)$9ʠ} 7LRfH R: %aƞH2Nq~-Ŕ bٽkbqYJZ'G!\Gb-[@h`5wșpD XD0^j6tZ ʒc2DXM;-l)PQa]0oRJrubN%"T1Էg OLy9VRJ0)w ,/$ps\}0Q_Ρ5(URz? b=1lOT=k $/S1MBx='vN 3;L{,3ky*zӡQt{^Bi40Ԃn>:@*0i1#.6uR-T937 ĉςT>Hr՘>;R+hiu5g&5+@<T"|2f.r^wDyۯMSkVKIZ߻ }H ?~c(_%z}{ym%Xo p!Ԭz6hx &"~H7]P J޿2=zªUX¾Bǽw6Xm\@E LgNQMts _еG8;wɱNW})g9Y%Q(L0ya&Lfk o?Ix@.X8 M˝arnI =])r"oղFXy4;bd CpjJ?!͑qg{lð%Ci}ҍF7jy |psxI樳$丮k|'bָ ޳c|X<4 bzO=?%O˲TIj5H(5}탫Fሉ'x= EV'"^u%"B:<PNjу3JܓNt|V }%SZWC"RPβ\v g=}\I֘TH b-9^ٸ)iqM}.I[f浛RvTMd{j6i~g~K1V &QcL۝ڌh&Yw4ηe(<1j0l"$~BTj{kOV$hǚR'N"IգhϸWECU3Zۂ[&X7J6nm]]nzv+K|= 51JBۇ].v媛 FMZMmt_8¦&aS?M8S0,^y۹~&1=7Á-ζ:L1T|C./$uCG_XuU }q[ѢHPl$ꐻ즷`\+*#]6$U`ep"or|RW\S.SfONd[6p"k J:1,Fԥ2D-uV7㟲8>#7ͅ^I \fZmnB&$%^֞Y(BԚgt~ Ef`P g7UFO21: MPPڇX@WYs$w4|smb"=Z"y8ћaҀ )MxB E=;a :/\o2>"^?#[CV&<(+.\`Jđ.s;ᆽ@W?:㏘408f|'4_WM3fr0sJn>{x~4,~ԘJH~EB5y(?t߼iU\^(&9%O ~:\fWĀ(GH2r;bGPݕPg汻V*.^Ǹǖ5hʊ0ewlKHrRG-V*@0H3xxK7SՀӴ4@cH9~SKLGq [2%Rc##Gwp2tf`I)բTdP9bh8^xL1)Ӂ;L%\?UP~;Rs_pqsVK>@j2y} :I`ױk WN쏾5cr :R%(Incu' $ PnxG=+,3{v-![z!~b L@Q;QidW$ \ndDfUrQAGY8&#:6'Z)6  SjcCR #DxEb`Z=AKKtY ل.y9835M߅gCE?RX[5whm3 "ɝqR+KQ:L7u GɠMB0 &5"3%۴xfBcG2 ~K)IR#{Y/avAnsD3\q SɲGPo;T}bJpR$*9A~V\ (3BbWWþxsi台fL ѽX'QcCIBL E/7 : 9KFjqLXQ0z?Rf8CS.ae<ٕ PZ 6Hhķ86Dlx:j溡So%Ѧ i$MF@*Ǿ63ֽH1PkKPO8Ɨ}[(OR K|(^ftvvصvkD㐺5N(&*Kx:|,u-砊3qAd@%pZ'C,-5nDŽ-Wcye #{ Q3IlY3<~/lm5њozq9Fwl{j~b5?# #x!@@F,1ZbR\(P:3EڶBQ/nL(WsVC9FhHS ϔ[ v/J噾 @Ὸs.U .@[](Fρ"%in5/=)\3ЄG_^]Hjfv_Rr`b)JLSfku֓ah BXsa.ĩ doN{p!-dg2U<\Z)qK"vp'>P( 9e@ DCdjJJG|Pr,C-Fd3Eܕ- q,0V󀈫1 9k1,ZErgLHsk57z\v,ф׶D.C7j ȗ-RUj3a OjhPof3HeF g¦-| 05=#XN_/d]ET b;q7XxQ &^ԝ9mzv,Q0至|ʠs@kAB&7T:jX0dW8#j$JOn2Ud=2$_EjR5fڒo6FPsԊg_ ֺJK|*gJ,.^ Q6 sޮo!18Ro%C`t\io{\w }!Pو3Nt4å@RS.j]55Hy> |hOfI͆u.cu̹eUʹj̥Y<P t5ǛmjC+1Г4ȎWc+f̄_䖔< J7`JiN\M1fA8qq(`K,{W.Cz3:`<6QY4b-gfU#Mf0${NnsR6I#qCAQj3ݻc c;9h{1y{kVLJWO]a.߸ ,¯j3&Ň}W>o>w?y~AiGZI BnZwTHۈ\&ڢX"OǏzV,0OߤDsgN]]Yh^r#6͢l!8AAF}+[q`5La*OiI2wǖ8K$"Fr sW_0Vƹ*#|+]#_-< -'&%ʒ/H݇B=f`YI1Ɖ?-eۺoo%La\#yn:`)ºq φih]s8~V,O=0S0@}qhK͔SAi= 0%+cHW +V6 A/vL/'9ȟN$Q(H*iAVe^sȕ5~ "C>HOO%؍كٸBZέ CpZGTχ"QDõnA&yt 0.^rw&Nr87M0}I:pf1Wv-HH5.\Tuv x_z#`>ZBkcpd y(FB}Fer{̈,qSf2[OBB=3Gv7="}(f'Z`E&*Y $r E*m)T20^`JA଒½@V(!2`I^y 'hXj`jx&0ؒ,-,zIO1a˺!>181Y[>N"yΤ9tb!~[ZjBM%gTce9iD1EvVAmP.B1XF{H.K6gt+Y=)(&Aۮ uhsr8Aܛ!k + SGKA!S֌gqa DFwЇxOlIem7?gV?|>o~v^?<|~yW7/~5>wZzwsB臟A?}x{WwʯhSPۇ~}+W_~쇇}o/ׯ_R͇3/qݛrC]oyw^|?_rU޿ ϾO~3?gO>-Ww?ѽno/Ǜ/?_8~xy(|Y?*kKABAY>jstD?pupG{9=cᇇ/|YXOwP#׻C&vHͽ@(Œ j@z i8IKzELA5hhm PSۀpu)Ae"l]09> m]͢F9MgU" L;}E̘jJR:cЇ2tnFrc)QI+'̄!b#|ڷΣVg8 =3jN|TĕtCKlќ<p f"nZ%G, Wzp2,m6YHc+pF7s[r𢵈BޢR,d+)$dӚ4oW86j8 T67(ƜOPup!3 AU+JW:4Mx kn@~UD, A(c2yx=vZqZWʝe$Z(\1a5'Yu"˲Z3I*FKf/iA).iF69(7'.>3-2[&Xڸˬi˔-` hXt- ;r0ebAyq͊< Yo@z۳0N䯱߹7x ~ˮ {m^s^aєo0X)Zu jN7iXb㴱XCCځքOCPUJW@Z;MۖdNp뜷ȴCuq%g!nYzB 7^k3O ]NL;-QX_2R]^k֑Q6EMnk̙vzR/ ]3aF1]!VmES:ƢڌE?/b){Ïw\H7_?7c߾yRHACG<_߼{//޾yg^ψuZ\ZfEcQ/q]n ,2E$Wõզ%#X]w]@=!(FN52ux"|>}ͫ q nuĺiyLn%$yOaYB=Gמ#1GX9u6%́unWR/U]qr|e;w@fF\K``eb͉i2Ld/q!4!هa>85Ά]Ӓh`7&48a&aJ0ɮ7:L(۶?$L(pyc KCf|9C"A&qkƆn` 5pĺ̙n]c^ϋS!731z2 XrIgے  +fa3@p˴ȶYa,:Vc-i< W8W+[ҬJNP^+e8> H2si! 5y1cq]2xNO-{%(glS}Շ+֯ɵL1Uy:sp+/_p'jCg#-t6Gj7vh;S9yr]1V׽W`f׊k#O(3!31Nc dMYu=5,lIUS 2Rvl'={n_m͡LL0vi=u~0MzdЃgRw6VƬrjWT\WYf^'@ONLNd 6jOj-{tM{ Ur-yZ{ovEI7Gه}ʼn1"Ep02KJYK4VYޝ4&Ki{*7d́-ۿ3ٹW\I@# oLIEjEσ֊ik{4'N ;KH]nQ;gr+饽\F\dVNaZk}/Y۝=R{٠7 x,<:L`!2O(TnI @9fZ4ݚ_43WIl$X/([9Uq~oi#қ"cHgf\Uҵ<y`N6soQX44'l#?`,kk75QN?-$!=Bȓ)|al9oKl[:"ݘ$;M2$gQ䮪*[vX&ռځFsп9`%WGJPl9#+iV'%pAժHk {b!(DzĪhtNlS.:&]-6:YoI;}6TWK 韥A$!]RнځUȤY54k~g]7 NV ;+>۟Ђlc PZ%T, Ľ N\0es Γkw&q,Itv/6IOC.b{n@~o@On0 x wmtoho5O,)p,eDvfwz;(8|6b$ܩk̼=Uڋ&Qv>L+.AJSzMõEN B\G͉<_?YRcM~rCqa؎$QΖ/80ʙv4Bp7i'DJyzGOy1ߓ/"T@ڇl)}}= 8.L(^r켫+*߳zkM%R4޾g϶:xi°qIɞH7wW`v ?VK &l]cn䎎k~wBHs%R\ ڝv=hisd߲O{AaSOzXn뢤 384; N^z~=|#՘%aujk/~{(zOLx +TT͑xH}HϬ;sCß)Dqs_,#n0̂5M%5Ss^{ k\v.ڠe9-m!s{hiH?mttEDd$*s{)`<\jyi 9agyxqҹ?|$H~3jf8gI倚uTnBϠ9.n?{T"C`bV[sSzOIWDo]=>R툶Y6QX/.P︻W;SRu4{nWL e6f. xtce8qRdDNԢ3c. K\끔{%�c8ɣP^cwzj|jtE'v@l^V1a7gMOf4=4}djᰧgdN75ڔw%ƽHͪ`11ɕ8.D̯5vN2.nÅf} sL3MOgQ7Koq1b]מitO۩ z'`7kga_N$^9i#'dg^^UM$D;aN kaWɦi]s[%ĵ󶚌S:y/7ٓEj{{-Aӏ#еV5m2 OAa]ٸMù"w m}N,i\v9:3wֳy a&\irH{Э<zB7AI]a!<áH36?-}6ǃ&Efl*fFӧo>J)>)_e>G(||_߽|uÛ//G:N W;"}{qOnؿ񉷮0on?|ͳ?lƼi^OsKk/oǠ_,[wӘ,E}v?\+Cn{kTo>S/?(715Bj^q2UipI7aD` )\#_3 $WP(bjK܄rgl8t-멎vh5rA{>49͝k8_i=.f  T#ʥX&R$`8Du~4pGvC̒64xP4,Gjxqe9cݒ3PC!M%3qǚǴPp%8s=14AC:wƁDZ^âDiXԮLX, ԓ 9|ݻ D,ЮJ& /l4IRPS(JOpV`,͆S(*)0=ZΊ|^!{ɅnփOb{E>XtBa4)JG.ղRXGwJ} Meg+ asDߖ*G$ /.1q8f; Dn)tZɢcуmZxK%xnfD Sw!ۑD1kl9Yh"TpLsۨ`a3ÎVqY:1Y @)e+K7Z,\y2KT0uA^>|Z EYyrZ@5 X/&3Ph!р:.l^<߅sNMa-r FT:  iŠ i*j׉{cL[.n> fU+%* bS}h]%Vm)RkS%=LtMVssP^rhY0( K]yŒZG48΄oJ'{pk|2vJ.ns8kȺqc6~/IPWmz26ŵ\E*sDC<~H I'ڎ&c2^k"s27 I8!jҪU_5T@PĝCȃt *boEɒ\,/HJ"AA98w(;R!7F4dT$}ݯtTt[*o;hSV'-ȱ>+}y2&H|/s"F Y EVcTee:eC kSC@kxcL-w^q/Qf`R?FJHs?ohSɷlr- <.A}٨MAVprjY30LWAJELJ%딭l'+9\PA"ٕ{HUDryX|/#"u luG?:xf wAYj]=JN=rgq&M ֈݬ<6,䀥W#P0`bt,!,Z)H˧c ˰U5'k_99NWX Jk XXU/*5@_OA3TUMEJU:>4AvU7PN,胋mW0GAdif!|f朑" 9*I+d=UX%.H"c2A51#ECU{.嫔R c2Veqs]rؙt詰2Y1QS5:N)5P]7 p*嫫N1xH-ugKVoLw5s nSmpc d5ֱi)$9v2or/Aq؎,. 6C/7dbmx\2XYNyYeXz\hGC沖$N0Yj2|b6ǫԟ2ࠪLOlnFSYh6<>*~*s xFiuI^cd9rba{iwe8T YJlȋKl=m$)[Ө5U kx*Ѡ[6qJuYW/ʭ +/hL”s<]UqUdݚ^UyR5Y.o2z/6ߓ' ?i( L;^}OM8+2u/='[Hh}F⃗ZT0iF B6Gjo*]'kxd85HOu=> L u0xVɣ_hv濧.-8Ian֟e6P/go' n)AVOcT >*?!8+A頓NMmHt^<C$ Rz%B*YS?[B|´ԙ *@eNPYkQW^[i@zjad`- +liM0OsF{3t+Y.ꇦ ,9CXV6+Tf\a%YRU*xlQ7h> :1.2}K!oslKu-1)BWq 00K Ӭ01I\yx}5`'A]x?2V| 5 3sX.>.FQv1hgK`Tvj]HP֠Kj Rc93XB(_bY@UŠR^8Ži*} A5AK5߱׆FSӌxG @O04\2$D8>hˤjt7" eA7/T9*\kʎ]½ p\uƭģTCki2ƫk%cW|̖P^ nut_y[7 wls1//>>;+޿/‰:c, <_PX﨓DVR#՘􂹠jWI/YJ, UQR6{.U"PuWY& fZ;%DEU+w ޅ #;[Vk(\!n#]RY2_BxZG*d)X[-{i]LX)`1RpDN'By 716@S*Dm 볜.X,lG;렺sl*e2qȤjt֡ Q{mj>i(wiѯ.>qf~qyǖ'C3Ț ^e58D'#rFdA{ba$:ĪӸb%\r'.o7MܘȾfWa]>׈10c0eh:7Q1ڻvyoPIuKnx܅.` 4fP~!į[k<*<>7ͯVS[ F!deY#荠jp ~()9UvŒ@i(u,n~`{rn`@j@ɶB:+ZFm#=qpD>Eє&Xmd]4\Q^]!pGsez rj+VۢsjN"7IR|&r3/̸P-A\~dFb Hdf ie.ruU\d)fW#\Ψ2Q4ua` {Eg .H*}-„+VƠXc/ĕSLE&VDnQpMY8d ̊M> !0<6eEhAJ5$# k;Nk/ESЌsYw|KW]'\)syHJ-6St!7y7q81(\|B q8/]fyA9/{2kL_I{%i]4N\ΐSL C_HȨf;i{!d! ;eHjQs٧['dߥ ȫa^Vq xɝhLB%OfdD3 @X{kp-δ[8z(w[mQT|pe=] tVgf6iKNBp~"kfwFWx);4Ulp`IF!6N|r){F)b,lMVx\.wZ_>Dchi/(fkǓUfZ}zh5)R=vAxufqq1iз6TAN,^U+a  =y \;fݭǍÀuwjVu6,j|5zޮ19W/-37YC"RYq*VXiE+\urVñwO]9b0(v^ ''p9ʳu"3"gm,= NUC~-mFbWa f|+3 ?G,5&nOJ?^66sf=8]~DDkּZY \5ĕ$n5ڗvQ̴dJD@J݁5RB,SM?QK̤D_ P"[@X oxhҩFC --"EnxTU7 ќGMjzIB`Ѵh $ml9>WKKr6mz%zE?CV[ >Ӄ"M ܜO3rWjPCƦb~b3z9۲JNmwmRx0dQBU|Ied:&>˴Y+iiX(Cp[Բ#MоA ʠ7v;!4x`~NyIύlHSC`[c@IY f6_ܻͳVi6r8!tDMcV\%aп=Y_B0C?ui-@oC?]04`Ū =$*)炡f.7[kp#h xU0Hj4_^(bqC@7ECrh_\|\4T$Ack!3|Ȧ6%`#aKgZr -Ԕ@.l0dnrW`QSu#s%y=o DAm>1vm˩@hۚ6x?.J5zѳqcBv r?4@jC%'1P;`^.TM1FJՆ*`kƉW@|hjQ^!JN>29UɆ yV]'7&e1Mu&/[hӼ+{#g8JTGv+lu|hu>j:z>ckW>cE@\Gt1z`{"D@voK,%BC9}k]g`qV슁$vMcAc+idHJ!yνU.e,yޛggտgF=L}6ٜu9}~vO:Gw۳ggwT~|<[Wj.|bb:.6ou6%> ɕ #/+sgg}à^peBu BÈ9=?[CpǑ\A2i3LC"2(Ҋ8b6(|w=|?7ȂA+/<ݻ8Wo,whDD)lyw,i `He<9=a]"VFS ]s#}2J[|:Q06._"ڨa@R6Pv8! DY a),2NePoAnME(N֡EH-8Y>psua`S??\oՁN~kmO./y+3>f7(6og VL |n2QшEYNf 0gm6W2J7Ue.ePY1.4LuhX(: CG=iZS Ԝyja')>^a9RFpEv#S>vx%`vR7jEXxh&VDU<17u߸b_ށaA_zؚYG5q+JUt]8OcipHQ8B!ByXYѲ 4@r`dޞAuڠp$u ?3dYfmѩP*ְ8 9;Mb.8X*UMbTgAلX:Ìj2\$wn"yG%Q$ȥ.N>z'@$Ivd^"$ D75@>lՐָuwۙ2lW8a5ZK lQa82F$@T3|5ꀒ|q`՘[Vv:p-D?i'@e KeU1|Ф58ic5X;cNkJșl xkqpdruV4nS"8;bhH ]D^Q6` Y6lރi4{RhShr'_rK,k};*:VKI 8Ȏy| 3~.p{;[ GF//)"Wb覵A1tH'kD!B*)ZkC. F`jjQwx&?b:4b;+Uu!r~kuD8K˩b_OXtZZőPypLJՍ@2Q~)_C Oz0`KgP0Gv iHғ3NTa$8d>DžO%i`3S4/WRԧO #s%xOǜ{̭:\=wP̎'d<|ł4D|z3ȳC6JD|ZF ͮ%>'>I;"R2mG'>.I"~}3^G|s!Ik=y}zOgVm0t=YIcs==)n>̞:׹R[s Yϵ)3gV瑓`#@ݓI"_Mxv{zy ׷?n>lۿD(bOK%'@?N$@2A~V#P;*蠻5hCHGNr{F9m5CW`VHPwݣTd V_Eo\(vp#/s 5#PksaME_$<#.\Wqt18r^P#<e8ø'i(Py_Z.st384hߕC -U'i@tGuI[5ۥ1n;^Kf]TZR,LG4'5qgf42} K4Čʊ< 3815]蹈&= 3Ye Gfl-CڢtEؖt%;Cd+ 5sI Nff0OIhyvWԄ נ˚Ѝ\Ax_ƾQ?FM*5SA I\{iŶ8J[Qp@!9IS PӠɏ?M_*e EQ/6TM-qxǿS{E:d_QMgqj"A *K=gVK 9 *t}apN[+g7ڕ#=7˟Ga ^P]aeMi8(u]^S}R38?1|t~uhWh|vzvQo8?L_L<š!~OWq ѥNb ׯC;&F-Oۢ:u&Vt SWkrƸ D7HZ o⼫ZqVyq&%(\Q$E]OF!EH FĉV}DU\ 3'*kx: $2Ȁc(]H5#ɝ82u+з=VzjB *U}.B<9!:/}3>Ɔ=\ˇuC'\6>418(n]?\u3ji|(emخQCwJ> т\ʱˇW>M+Λ<!g[IW6lX˪R=v LCU)U<UddxkbC5W:Z.Ȇn"YR249i 1\'py`.4\( .tƫ΍O[ 5] ރ1NO/!i;KaEu̪񡕢OI2tb24gg77/non\ňë^7T9~s'CSooa@?^>EC_{W7wWvTiw/ibM$]}OJ裡AxVuϊ|_6Tk5>ksiZE.g.\_˵ \tL n5D3ꏹV7sDÃ=pv\ v*kM؁%˱Z/u=*UOp|=Z4"5sjVw܌++CS5jZu,(TkVV8.uswQ׶u3ݾSwJEqW;( #ZkÈVwCL:53Z3 q>2 PPF 3u?lNAQwkպAă6˺AL>dZuǴS2CTqƙiԤ#; |iջLkV'2f٭Ll+#MEx\.9xVy̳ڧYet߷:{<:{T@2u'\CBI]Dk]>,b,Y:u-Xs7> ]k:՜[51@ջL !&T)2Su'BV;'~^>D0պ,_b?gEgg W֜FrW5a!r6U^]hߛNbx-k(3H+yORUZa!܉f"Zk\5#5ϽZsZuySҰ;4vuxϴܛ՜:T]Nz8Ѻo JBR|=4swQ`­KZ3ꭎ `S)!^͹;@(R؍i\.:NOyh]^>STumtwPڡO֘$G8. T;JUƽGjb axf]Isj@vZ׬dOhhQIr[{o7O[E]<0~?pAF3nK.A^`KnPak6_K:u5}:EB t@POX+s/ҧ>Gn UIiOfbtT!o8fg 8UPdDͰ&{Z>"ԴNhG^]*SVE53;Ǚ!.ʱvO֠bbUdwZ95xPPuqDD?580㋹kS1<]ID|eXTJ\4YsR?^5\ǢծּwdQgG7SE=8Xp7G,Xv uz,ڗc)W=Q{΍v>GIA9;롢=}{C9TNjr 'C1]QY:A]X=FOEYck7M3r@XJZIԣ3D>|$c*u Z|7uirՃνGt$:\HdHZ!4&Onڋ4jt쮓'f#:^Yړv¹i+UT_D]uVHgPuQV< w<2§;4;G z*7i&'+HeתC&ܾ_R*2寗t _xb[暀}U'Զ7?Oos;"./DޗgS,?l6DkJyт}0>+K#s'd Gk¦1iFjGфH`ƖPUU(dq]vqڜaTuZ),!"hv,T5mc]ISRGIN(@]GӇs'eyюL߶XKLap1) vI QcŅGǒr Vlemː|]rQ]Fb bOሮM%KEU(DtÔpmA=8JH;% Bn ?܁ۡ0ڗyv}1:@%NA餗z4Б 4FJO:(Zh9II/%Z0z A3k3u$c|>as:h4eqjQ=P=go .ZSu,Cױl긺,c fFӑgW1c? L.a3Jtt p~FbBJ:Kt.LB.1~ bt-ޭ+sMeeטoE]Nk?pMբ؝S7wZ$bwihC]Q5] ډcIJW%t%8U5c%,Q7"%7hqS+t>vx&:hEXw)tߑnvSt}fd]^y݇.^mԇ8[{/!Art=aiS0"MMiI%p(bXdMq;luu+h?:] Vy6 ^Yh۲C qcmDF9NqB֑FW?uc 9Ԕd.ESynʪqV]=Є58t>\D򜇝N4W;9] rζTp,"6>Dx:IUrqcl[Ɋ#- ZPd ({úK[5RidAPrb ~/:yyqpfG [Ԉ~D$=YG!'SQ$ Րe3&b0۫)᜗S!̨UCaҢm5ATkD9h*qP@e!v?뛣X%[Rz^8*®#gPI4~޸Qp[ U_h-}۱׺L׶NufcjI񡾂R mh\= #\.q /rYƕ94'+z%>KxLSg\<>0zfϵe#_IM5| %]&)Ѳ}̰]p&IEu0]4̕jSʑ40m& Lyr$[Ij+nj';h^jJ5<'&+L+H`ԦmBV̖X{n~"لP񫣿3 +?绛6W~iKS0&?C/pclH@GƊ꦳(,F,I2gq 28{hbŒ<1Ph$L''`r+]LHEXa*${J5#4[Q<'㮽! @5FI0}*;yk0B.`MN$]|*5g*ĕ'3hc:ζ"LG IiL?iÏJ4(AƵ4{EV%Ls3:  Ä`33E*Jrz>EN_{jKYx,eɢҐІs[J '9+TX Wa.dju80& Ln/S*Ki7fDp8לf(լ3u3a4q{j霆(syS(rPd)ZtirUJ#g@oD8̈w[cP#=4'[f{H 1xOFd˓%1 xcL Gয O dP$-x11D+9:<'h2m3DfT?N|Su{H/w*|rt(;ï6'r9'$WΟm69#l5]B׈A `Y2t݁{ \iFJ6vUl!*xP#-}B sJV a@2Gv֚+CVZi`^Y? !Ykx Rk!3`Xbآ>0" {pV;0m}VSYɴn5i @ccPch # +<4@ LM@'Fa: 7#)1v_I!ʦ哋\l\s2ʟ"É&Bt|֩#MKc|.yH];$&-{@p ntHC6[1Q=j 넀iTk[g136-3b%fvYQrHE8:> a [/=1"," @-uc&F %#^-s EBYw-)nfz\"#`76.]|7jADCi 0O*Y@45qX̡JvVJa#r~Ѵk9N  9w,:ĠFy&Tp@-6cOIbU^Pn'/hb_x$P0"ZuEPbCeӌ|zw"ޢ\ @zfq8eݒ:߉cu 9\iL%mJݵjݬA a smE!1e$!*dώ] V,]d\'G`C8D겻ڱNA|haEE2pOe)ktlrCS]#&ǸHޕ'Wpr JSƦ-cCJ?S{ԓdFdbqP ()n^s;0Qޡp:l%T!ڮ,S- C69@5@r=˰E5 r̭W2?f~6x{nʭla<|ќK9euHJd4 Chh+6AeM8J MܱPSdY0T%ZAL;W〺8Cz(BGi1]YbT)xG%s 8c~NC!%OQ2.DtM,[,%W"J$HJL. *`qI%1hZĠ^Ra;Sځ[(^۴*׎[e;XG`ڰSpOwL [V:e`7%)2MO=؏롾OY_sO: K?q%rPB=q{fNG^)˰ѾP ul3]1E keŃ`XPaDj*{hX ̱fW1\;j 9QLJ{ frK3ɥw,)NѨtvF pļ":HY7s%08xOВߜ̯SЍp|*?fVBkȃT=FU8& EfNw$5{XJ̞T tXⴝu.}Kz氽Ҿ;{թc/cd+ 鋎0.J7 FcKڀzơw?v[Հ```&`f`Za$y@SrxfVx>K )e)Z :f4Mrh5 g\zQMUVs S`e:*!͋e ,zRCNY$\'3%)sk2juGoPl,Yor7^BBs$5v@#k(ĠqFB):ouNFzG\!|и-W6C ur[jty5TeYR+.Yz.2O+Q1SJ,%$d.CpEiY| U^Pjm:Dhx"c"4=%4Ǥ (wٯ {O.58\´dܐUî";n%0*iJ0ִPR1mxg{G"qkWm+*5HFn8u1隚(f5&l'zqU[ڸf]4`5 1aC'-<[ts@5Vu8PhbI{Ր& 9c(0e!:IzSAL@Jna] !V7 Tվ1&#!$i5n<I-)z6'1&]zvPLag:17CG r&tu*An8ĵ D.T hv [;NM-I-`KQEjrcJDRݝZccn#-O `SBY0wN&N+33i&I4|I!Vll2\Ć:/ A 5FiIIłl3\Za5cx``#/gIԜVی;!e- [5+Ts2r[`}6UXXQF5ȪNoCgA:-GxZ@^EmQ٩]["4H@ӱ]]+!kn=cCY,T؄ 2_ Z葡KhQ@능M7r;BZ"Nuue9;ZQ5 !Jꆳ%%颲 c;6oizZv0GrQReښibwPM9-]<.|GA "n.+m;Fs.i]@V96~-VrrԶfcIK@jLQwioY#EcbRN=;={)n_ ߏx?~zݷyle&6C&xhn~} LWڸG_ؘ叿?_w~{)Y~^}{߯Ÿx^%W/THj"i%3߼?Gj Yl MH8)Da7xSsЉ 2U!%l^2ń- Eyc.4p7'P>M7@ sA]@`i|!! [#%qڦ;('o(~~Cbwy?(YV|9ۿ!uf< J5^ސ7o [86Eo2eN ŮNCGw,䘙&.ɪՖBmM$*vP'%<BC''][~S28bJqlm(hmm"@9 ,Ys_V6M_x)嫛V7m;wFT c}r)4WVz{;FɘOhMX~wvtH7@}D& y_uTqwyd= .xD|@ QR[y >"_\M큘} IԋmڥE:C_Aoy>f@Ro%P.U9 hD#LCF{mfګj7z){}!/N,WU&l>$ !tҍIvT̃KNe} ]i0'.GMԑN?;rQG[ =4npwy ?32{Sh`jRTwl ,3C"z? %%bBDBDЁ/žPvoTu{N؉STV)R\XmIF_,vt&rb(,|=mgaY[[Y~R#܌FiWņX9Cd0)q_8dC$'0vY {G,mwam+n OufPqD@C&8%QBl&Y&Ql(-deM|+3B *fē XS,~#d‘r}DiAД#_ "xT9]H |xdj V;I.㋗=!&㣛G>zo}OR'W_}wwn^w_޾/=o7f xuh߿{y{ݻ?/__׷ϣFGg?Óo~wwfʿz}rOwPO?_~޾|'zWoo_*Sx:~m~EC^޾~xߗ?]|'˗i{O|ջWߕ|v*D w.)?Hw8lM"+BC<`fa)7I%1twhm[xcUBݤ5dh mFʀf v"G#fhҭI6(\|¾>$ob.E<]mAWez&m-,GWMjkA0GJؑyN$N"rd0U FU&'ɣ+Ÿbu 练+fSQ85tEat,|T`ȓARص2#vI3pVQdDCX:L;# ]ԝMfSfMQ_X#JJCaCe-hh+Y,j9(ɍC"f[^ h10](t6Nצih6POaT(G)>Ho v( 8! x!c]c V =Ey=8T{'Ǐ"hxiW )襆nx#\ "ov5@Dgdx_tc]P#..5wS8ia`wܫ'vتH( Vt8ǘ&"jwu5#QHi91e HEjv֕JnS2aYʺ` Jmh 5g@&bfj;`VJuq8IdtTo2Q>ԝbFT54a{> A[$"QuLGwK8⦍ܞWkX]FGvOےndɢK*)"(t#MpB=,F )RVLtUdm"b|Ȓc+K+fjXD.M§0[-(Kd9+_iZ./,<tT+ЧU$ /R]50S:z M@ԌU)Yz 4 JCSLQ"4XFޒ PH1`B|Hj1MIHg˂\m uӨ'xh$K>,.?0Q Kj:O|s: [HbXh 0_1H7^!Pr;! b{P7mS9`^ʖ4YۦC tX@-ltQTY-0D-ZuY XҊ0|YS PO|Ao:Ȅg`TsaQߛ .Wh6  /P*n3gBMig0E.Sq|l8F:]~=@#QfV^O&RGyRtjڰT#,'89bbC:?i"Xж"A\TqN*V(5BnDBKaٱDap'3~}{o/W8>cgl֒#7cH1>6O1-:_=J/bjA4ڷtI,1cW#@"UPq[MZ2[!΅PBvo|c֢8& spZ Y#?<%F8Ƣb氈[KFMlIkJ:ap]9>QLZ-bd׸n7hkL91[!jIIFqa;մpsr=EQ/CA0;GC]% LOׯ" X%eӲg#HbOie8 Jc4{c2՚rhf{/5sXNxªu⢁zҾ#\4%@8Jg"cujX%1a̸>Dr ND+!q`<cMyXVA%;5Y#,M҂̪FN>ؑkZqU)D[UEMni?a5 S3-JR 2,^O 3[1}Y&S0]]#6Ou4u$8Di 'Ŷ`\LƉMuD- ZJ@fAKu8(L|t4۔9BO~>8]q3/vgsX;ÙYVwoJޗ{l2qWW9x]?w?=߿xƋknhr@߽zafx L!S`t_)lBCY7x/m>Otw69r_!}]l6z]9 uxCyjUnUrPS{ ŗwc$W 9 [gC]]iG/Ӽ4a[s4_ϸ٧ќ %pyAa`.d66ҝ~-l)+3L}n,;S -;-뢁K]ibzg Jp1ƻ!%hUA3Aj`|ۤDlc>n}?*;uڽMuC NcIpZ١@,2;JSЗ^h^h!UpӷC޲,"+Ӷ%缹v\rx"bY2Y(zhuXBW3gRXr'fDZ0a>{ugj M!Ips҂q:mWkP=3}립͂hpBz.)(8|'#5vKJnTCaO1bVxW it8܃,ΕU_\1i(_)wեWW͹' }"_ݹݙ<ЬRXd&UP9nL0}+]]I<[9t;OjvUnUtdC<^s%Pt6 rҒ2aazSBC*BČ^3r2XncM VT V=VP,xL͡||7JA.]~1b~%T"iIb;+}~,q(e])pК)^BC3&寺ҴlɩNz.0BuFΓ΅kN KRkj-fzWz/`f}g D1WC|gLx*|jg۪ Z _.O08=ZBCͮyTkLMJ.v ̋i Dv}`SB!QF)vfL%!݃W%& *kW;*< 8+꺴-CUE8cJ,CR u^UQD},i(p!`:K!5:4Ms]S]uj}ipOs-NW=izMr$?rlqlɦ2{?6GsXS "p!i K`t>W'l/.Ū\qNdS Ql`E+&4ԸCdS&W1sOsڱ'Kʤe0QM\iD wE+՜.P-qn+Igjs-.\kCZeеBC;jLpKvQc;#곭2jK3}Q|{MՍRxIdN!'ʯGW7^}~/%j)RW_"c9RJz"GG[=O #Z _7(XOK۽ZyK> [ٵ:ZS.‰V@v?Z/PH IiWxFbb ,V٣F>ysIph J`{a%hi 礽,\4W)}m%F7wPӐO:5ÊXS)%ĆqXaմ6a"d\ 1g0=Xayk;D6fy63]0t;FgEH hLRXqZ P V=~C~ZX螀|o.Y3]V,jq^Ǔ*JjE)Zv@WC 7+*6a<dCWѝqv~b2az:,4L6J j;wQb\_Aq Q*91k|\:9yA V́-۞qL]R*d%RC5|Fc+ٱUTc R`6̩ R?B\ q( geq0(ZA@3LBd+D1vxaX nn. hSkI>ʠdu,zvDQ^!^qm,؋ 78"vLmQԜޘm2<52AʮF:;9+6/>[<֝p9oj[wDg' ̐؟ns-9~IyaN#Q%˪6BJl-xMC8jmvp{jM`^+3y z5 B| FWC!!߾aW#]N21GAkc\# =v9h4}) I6f[ M#2 ` n>- F|}j4NL Vh̤,)P˳{PljM0p`{o,\)WD E!-5 4o6$p.l#g?o*+FF/wAoeDUW?翪n~ϿvF4Ŀ1#z?뽞?"iR(6bcO%F<fZz 79 GF W51A=8܏Lg& %4H)IcR=V"qRjEh iHU>\6}q֬ji],PV7^_C8CvMG RP9iLs)5 <2(x=H cU4F$0‹2-(c.5pZ|X4~k3R(Ô0՘-bZM|8ֶIx[H*uߚZa1%bY(x1=./p#X{|"y,]RyҎi5!qqzEW[?+R= ysZ 0,vvG3$!q,jE$a1VQKC$ =%285Ajf(lfΈQ(ٸ$z F^s4\#՞q)i] txKyjsBWpD,y+1W*=cz:94Q,|SoB~IeR4[e񛺤nQ$`Nw_>wO~/wB 5O7:7rk]ʺ<>_ۏ?|#W<}v߮wߥ?]o׿ݿ_J}x [F%~xI$?xKD&Żs$R+H īgÓx3XxLyG"G?}zt*Ç(Y*MJX`p~N_EHq@^O(&pRR=1p`\\.@yԥ &Ty^u&҃HfT>ߠեppwxd(nǫ@P ۆ69/S).e\ O?Dmw1H$HJ@<O ppBY_;Iր5 6dBɜ*/2L4 *MT[|ލ:fSFp7 xwP$sLx˖k4Qi?r+ѓ̾dvElF:C0cl%=h6RZ<*AS!}l 81eҜ^ăiͩF5*=X5J$W9^g7ۀ,[f!aΡ0{8c$kp-+ָ'ț(P 8Q>^E 5\rP0  *-OXĴ`VЛ 5MF_zl,F,dmy&pHH^zU Ii`;\d~82\EaD{mM ҸؖF\߰բ`rOqT՝SYl݀FW֗h 2͢$_~+ܝNI\rii=gLΜpY" v Fb-n6o׀*61>Gf8r4RN[ uO͍Q7d%u&܄P!c 6%} ʐUPtƦ:*׈,]Q@>2K̥l̯=} d:04*$6Yժq,`p(]:uxkgjGY+n>FA $q8]%R(Dڃh30>Z*KIwTUt1>VU>PfAu qa/'w@bV35l*YF9WۧPE-6(1M&ʦdo]M:S02D`7kdẞQ 8 LUiG7  G^{˼&qܯ&{AlKׂ(uBڶ@C`N[h\遡=[p)Hy/gi-Kϐ`y'Amq!ګp3}x:[{C>ci uTU/>"pKXR :a,ui/K᜘=Kex^%t_- `&̱ jV f!@42uqHag(nި`yu&b'‚ѧc܇))Lq`,N,fA=E`ӊKD/eHB*&gΆ)$z9a?}jvO¨t3P-ٺ.mNLfDGS%_簏NLBnNt@V,~\agD~F:8@'?-іGq&DH,];*N^&0ao}LBE1 &&|򠳧ڠh oo3j1h$[|<1cNއު nҏ'S|Bjn4nAItĒ4n[-EN:k]rj5EMcVo.eI 5؜ Gc&?GtVdC$IZ! fA0 B"nN& Irndz0:0 O̦+35 $#/p Ͽ0q[_k533'$n:OU! Izm$=̴ą WV[II^nviAW:1qB@jb$%,*UWaHV&"=.#Px]g+g`I":`>SjYTaݨ#(BBAPF9<3i)FcZړK L-5CHaت31H$řHm܀l  B ש=T&} "J5Lʀ03VLR`m\|Vo7/GR۾Ix?w/or?~~/w/ޤI{|xջOo^{ן>ߐXsW~o_}z߿ym^}pɳo+2+,C,K0,0bUr{U;Kcen;Ol0ŋ&tGU ( ٞ.Jhn0)tԐY'm'sy[v$;Z͐'X\v@NwH2Kz¶#!M}|5`Ƶ2l3֘"=)N+DԤY  a2#^ sݳvz 9@ПUon}xǽ-BhU%m@'O咹Xz}:rU疲6&g7f4hKXAH w2 \Lc5xRJvK),CZSEt:.7wC\5.qZE2)+x<,0O:t$ʹg7Ԣ;֯kmU*ݎ"/ svCPukojӚnUn\/ckɎKmloj'&|lŸ OuJe0$1YYee2fT=O<U:#x7l~Ff#hb?ݓ=w,}8 pp~gpǟ\k9X!Np9$\XbY9L0UZf8űѠ .̞9hM1s};y忨"6мxhgrl^$tL0VР|~"4m";sNe>@PʣEs˙<\sꭵp8ۿO^M놗&P{*:!"GQ \sh. kng#NyA&[ [rAfH1 r^iH3dWs4N"ͶeE hPOK*h{\u&!h4: LK|a1;kwժ ,IQ5u*5~S:yعY*ȢΒ.x;wbU-;QJUe2f;_l`uUv\3s[C*"n&e1}~Xs-[oBI"pͶH9ڴU#s$[_B iqI)Rf ;3tL-4T*.l"5saܠ\Z2tz/Ervei(] -&0A󓀳)mV:rݚP[ckƝhxoa|,|tlPE:sȔNdj9;Og-pƏX926ٮgRːo~7F=t’үYEa-9w+Et.+x&ghN\'[O,*OZT:8U%'I*Tqs0]b򚬜9gWP gkz s)5t>1uDC)6W+ԛ[b x9!g B~&=mB5R1)s4=sQst:YΗ>YS6^=sC70l֢ǓfI#O6r_S%⢮0=׀>Ć9Fer$srdb֤ .d-W@X|iEzd$'_Xpow)ˉd-RK ["H| pl-CUiy* A6-&{pf@DU4S6arrר-f%O Lv+j,$۴k#DxEQ^B|Q7QUc9[gAfw/ϊGj݆ӍGӼ.4ٸޖij4 ߰bEvz1[*J}$iær=ZNi6mb> 3 xN*ܨ3w̟krׇ/m, xq.L̩'G&cLO yVH:c jTȮ" ݏ/~])6dׯ]#VRbGG*/2!P7oo ~%%_]&&'4lWSQh_F\v}v$9)p HÈӉN,6:0 "i"h{\Jyqٖ2* orv<\*U5P݊wv+l=[Îc sΚ%k0Y\)v= =:4<('*Ѯ"3ZY[l/kɤ4PфmV=OL_4h^^-PAfDCKZ&x*sLeؒ*(GJsdsIdnD1CPݠ5\w혦Un>{B_Rт xű6or/Cfѡ6͎>-CkNʨhgIVFcvuӎ9ZՐ tiSpOug ]F7ϗIx%tcs{=g])edfh jahNrLbϕ9!9.krY6 %ɱZGobMϩPyӳ'{1z)O֜Hv9RI}L۪'C[r/٠<>zJP>{UIqsz k* q(ų:u`5Y`DT٣Bܦ͹`jQ}MunC)\__SHrKxTV&" Zu/,oD9|i(d7W_ESs,/Y,ڳ7z}(wM QO7*.mvJv fn<q{8gs@Fbʠ~`K< mߛAreJp۶" ]wHF9rÙg=l\xH.}~H*7S E߾xoka%P52?^_}zś WYܝ𖪴p' j ,Nwy~ux;y|$z?Tӟ.<$W$mz9 MȋiL:|a8h?g #*P(HJV(O{mO9b-XEqYH3DM.Ɯ t?S+rt"UYhÂJ >^M?ժJcӸRqxMšlqUZox䂵s3JS%dwEhUu^lNn={3er26Rr Y T3ېr~a\bA-5FB憞skGNxo"La/"^xi݃q`ؗ rt0$q [FRdqvoQz !ibBձe)#K\[}%jI/&aiĊ(y쳂*Da @Khv)a&r3)ŬiP :E"JYt`zM_aͮX3EkkuvWϠ :#XA;-jIS (ҘBpYkh۹:OPGt7t}.uqGn#wtmv.p(wK'C͊iGQhùD'] ;r^Xβ41nǭm~Tok^a|:->mA^Jl>sh6j0, QTCDxu4 Ǔꅀ$ UMxf ~@!r1E_KCүbs! CYa7pr[|glQY,)4  ]wvCYp|zYÒs^VΘhg/-(Qus^TZ?L?ZA3"1x6<Y-$g&1.Mzko(\Aܬ6!d*5`yՊBvuixb_L)> Ee=PgzrT_\sKWQ YirYܕs3dt.OZ>K,!T6>nW_O:z w_^`(Jp@?pϛ=Tүy%ū ud7naaW*HbR&*WQPBCI][o~zܼ7;Eu $xy4 GpR"lJ.MU䦗^>} Х?b ]m\7Aߠ j#:zW]  ?.w7V郾\d,$̓>tr;a͕WTqhn) 7rC|jn0olX,OyJ†:ŗZdxc_>Sf@!lX]'Ny*GT?ȎJ h<2oWOq <${g'O[0ͿbtD;O7rDWISf;,ɟDvCāiGICte>Kgi4_EN .\^#x5qH5eK3I kC9uh,I" Tܵ*lW!Oڮ47! 7%(V&Ө'feK2#'{qMAF0IPhj:nPw,etfY9i0me?|CiZBIʍB '#@T-jN)'[DX̩BYu.o,5>ko`k4*.1w .' wn*fKTWgBSP͞7@# ɒ)(il= Y{{CmhyUH=it8o ]l@c:MQA-X[9 ѽ<ފ)l"$NwښU̔-xRVٯMecw45-%Ǯk5B>tYƼ@Wf j=&eA7oWMr@jpT1~|jaAVFcjJ@s$GFy'F=Fǚo8ukF R ޳]Ի#Ŭe x !J!y *k *MYB4hq,C@Aڸ^߱U6OW`LX,\K"KlŴ &h ;OIzΞe$ud.7W2[@,XH1QF!4d3GAd\cL <"~1)d2G|w@#Q")rCX+2[ϫG5e:֐X噛-[Y DYe<5t0E^䀨ʼу,b4d+ڽFAHceE7ho0fyPFs-3'g ciJU=%En,"OKYNSb' =&T6YJ~ q!w%midkq80&&WW_3u+`q-v2Fs4b 󰌑!㧠 (dϠ>5\~xݛg \98>8 #/__xt==87O~=p'ϟ=j{o߽yR?GZdnn8Q8_ݞmnGݷGG'Ӑ'.hǯ~gWÓóWO^UՓ,j zJF/b(M xWI7@)BЇczA0rtflcCd5ã<ы>Zx,}&F0$ [`,EҒ+ y4#ԑ!|y|e`rNH Ydcta@ \&Qa:ٗw63˺t8xUd:^,1od: UVA1m\Z٤ᤎP-~4'[Hd] "w9晝MoRaGjC)`UC7oUrɩD"R+ 3ov6c 9bH҃Op34xY[ /9x2tX1b9cO%LĶ,VAy٘.5mPDo‚搐uk b^E(.Յ2ٰn<J%X:K#be dXec$NW7J􁬺U{>rUB_Q.\]5ǙIj+ӴvSDC]VHGXSNt:{=BET}9=J niSV;n1&SI eʂ51p bׁ 05r,$X`''YXik6Ǔ,=eaҰ47x삲O_~}򩉉WRUn{\l_oG~9=uV}um<"q|茓OCinx|v{?~/={>,[Ň7'ٛN/>~Hi_eOb\9\I'='7V$YXjrH,<8C+FBŠ  6IOm:cEwS^JW!O ݣ:~ Γ Խ*|ꃧ *+t}6 m͊Ck @,\[ÓkM RGPm}3Fn:!_ť7$0xIg=ŽJXagXE׽Zmj;UPGHNkP FUG0J'b*#rյdE blzxAHJԸb6k .M;1fjԲf)X՘¨RJյp!x~PF9.#rz#$1qBi@1nÇ bZյȥ`riD644T $ڴMf#R\z8S\cm䬓ұSDi#HSGb"~:S1I@.Wr?H@격D艄EiX9#rl?-E#AM/'$ζ2DAQ$!.8'oxcҾM 'iA{geVUȃJjBszT;jy`p ȿPXٵxd:Za2,С^8IL6'qkV60mzI{q:@-FScĢnY<iq3`]Z=ؚXr;+gXtf &SʵNҠt:mc[!L7P^Z-̼ c?fsx:U $-5`1`L-m]Ju^DZm"_MeVƍ`8k~Zi07zQAĨh` Q\:GA5h ٬ OgmRtcSpSwzهyNy~^=~csx~&;߇_[ǔ̟1ylg GnreO>v.r؉#1M-3 Fe|nkνI)]*>pLJL lI v2z;n!y#Q>t!y 9&9s į-SY^T: 9Ιyh^Uu)k9$eX16!1Q]'1"6fe :]䩋JƉo8t(#U$JqU!g=svvkA$kIw H3 =RaJZE5ݽ?U&eM r3}bUU 'Z˼y3;LeyU:fgW_7" ލ[[qbZ;0hHڔjKK4XDs H(lxj_*pҖ(zfS JO*1! 6a%ݰ1V A4p%{oWS ##a|[R}7@1V&.6BpnaPW_|u<v>9*RlP9mȖE&g:^a8T9]yE1b8"ϢoE9~ 1wR>weQ9E,jTw*4h *zˀ.ND@է 7,$梜n:^68֠X/8ѝKY zאgXƠ:d; MѮ=-!X -"1pt`\QMʒ*\m߀i6 fK'y&3_3/IUZׅT RБ*_ܩ2}\u WHb@Y+N\Q()ζC_y90"Ǧg"x:.T, Wً/3&BlYpU:N,Ec6<Y,%ꮩo:ΦcMmK+-%[ v/o|vj; oB>pk0D +R}^0i09@V8jJZN[\u4a\[&,qϥD_b2JZZ1L64_x.j=;nkI$D*ˋSIq PnvGKT4OѺ> z?Rs3M+*mzy=4_]d[M BG|xZA@E)().^~hZ~h5=%:>Ֆܓ<2ت$K =T+^Z6_6Yr쒾euˠSYL|u ѷYY@Echz1?0unK|҉G^%@T^[+2Ni_v}[G{4 ĥ0%eׄ.{ tu 4>N T4^m@k@-@AҖzaϦ7k0 ==`Oya d{"{01w{0=3Þ]쉼d۞P]{Nz֯\¼vس ӆ?8D`[ץ'̘v<'cEs{3:_' Dxnzz!Oy{>l y)Q)oAdo:O{s}"A/n\Cݾyan/O/V}{϶SW<Ogv4ky%Yҥ:R_s x:^N߳:5yxe1bsy~V辗4w-Էo?ZOx铠 B]w==+YӰgv44+c7[ 1/[E. )klmǼJ;(w}E@'3vv=pkDC t?{YBC%][o7~Ӥ]$FQ4$<F1ȁ?~xaR:Tz*<\lzy6cߪ'*u[UbnM_}SGS4oq'H&^[&,ꛜpYyo8aa,\x#f4Wؼb: L'Ǭm&q *N? xdBNj}YbVm#ʭ}0'IO(k[XIT2GD'ot"魑Ӻf&dP![Xϗ}`fYII{1VK6%F[oLJ W/+毯^}D9%œ~3?Ӌ?z|޼{^2_ݿnnw߽{M*}7w}҆/w?m.*/9d {&T_w|폻_noo_oݽ!_o^޽ys7߽mZ\|~=dWbӿ]|6}O'7ۋc{Ee/_{e/~yԗ'}jR--S)-cNIe&O Q!(- %eO6OoO-GֳN} g4x7m O q`gI93lM?[{ Sʒ@%ȎX$G4v TSd:F'FxX*>'( r"|a5^x\gnS ~@\}(v^8`y X(NWA,70=N`uzDB'/S/pM(wc-Yj^?="DR'бC8G@@G@:e @MP?!z /^^\ U7_~ڼR|u3@**bA/:ueA0CŸr) ⡐@C,x)r%Yb]QBx)G<ПQgh>i x (nc{c *UJ(@O@3( Pz=2@2(mWL剞(JO~SqDMּ.Ot (=KGV@i&=P On6*FZ$Sxx {~4qxtM='R*HP(ߩy4p5&=cg iP {U釫?ţVիO~ZL~9'nI/Ύո"~-?K 04Gqd_!Z鍼DL9|ۭ;ȃR,Q6c^[y6tJ s g<̍#2 aUØƵ ;3Ji(䜹3L~6IL|hqteli2W8.dfX*.aVw؎6^2(t8iCl:0 ~@b~(1W9W/hQ/m{r9.P~ oN|辪-v OfSQ/0R[;8^,g6U --gcCUq+Ǔ9'GcJq#eN!Β}&JfÅO8,ˤ&1*jEBN`BUUϐgL RZUdNT"iO)3ٗNlC!U>->8?YTD8([?1bSāI\!_ L' say sg`Rle€S0Ba<)Æ0<,7RmqRF'"@BbYq2a2! BYo(;! v6_m1] uk>\ F7`<"Ch؍0iF WhẊ/ ]dRVM@ -%֋wou_R|-qƀV3Z 3񴬘7]ղh7qtg'HaWEi7 b~VMN&01BPtW[E!757CJʃڋSbP9jW@;HrH VEN $3xmf\%IBLgƤPQgD%x `Q2(][ oD0F2gCk'a!Hf^ij K bwxYXԕSƊ%ZҊCeEeK:uR7`b )-6U;=`$@E#)ZU>Oz mɉh4Y.S>H$D# ˳BPl4QW(;SDI,}"# B5`c3h91ΪLXQ 355*'&Y#ZDɿyr4S1.cw^ wqTiqzq7 Bħ/(߾8!,(@{k:0z&$}^0Y+nqN| =F zrTX8Kؚ%KEOd̶+[t)ueM{F)+<7Q& `ȚwnH@#%$c !3)2& vXNR20ʣSa+xOr0(5-I] D&4) - 젱8Xׄn@*aoBPN.|ljПnАɦ(iY޴bG#uTl"R98s*$r{s?f@(+@hLdeRpW8>Y0Gr4FˍYZSO^B(h/,hX\Z3y1j% nuIb1B?rl蹖rNn>m4W z2'sT*yt޴4P["lbki+_Rg 2Cȡ&i rIz0!4nD*91!문NY6*4r\x)NlgQ*]_y@1Ʉ[kّby@ҝ\vgo)JaaþBK(~/2rs :h.K\a(5;[h֖5{ fև i1k`O Ƭ*S2P߁TbY+ڳs^nT beVr|IgFtyF3ihO9Erl[' N|N_Z !Ge[| d_~2:|Qdm5 uſowEΟWV +ryfEUJEኊ=-S*/;NH&,8khVԌAZCp.\F# ePC(fO=@Pga%|I?>Y!Rjd5/f: *gm^霞n @5ЖC*J]iXiu§#YL JyQ..S65Aj q:+(p}a08J?RbC\Ugi5jf5^UUNQ-!kB@ޭɷC#fVtBۧh2KhG}Qh-_: C:e,HFStE!uMY(BEL Z)P~#*0䲠Z:"λSMS5bVؔ/RC ; %Y؉&I2ugL~ *yEDM{EaPGj4p#ĕl]k\ U5v<9?G;9͆Dnٖݿ`vRTД'vjʦWMlD)lcvJ̺Q!=wש\iX[bp؎"uua6Z#ǘh2l&qQu(,TS_Iנ"?{Z[WZS'3?1'i1V2a(ņL`NBqFQMMaik J_bͿ)wԷ5_=Z,n5cȧ^rMT|f&NJ@@'N(=y_`vC8~7`3؊9%FGSpm9ȉY>+[!(RODӳS©5 % zzR<8PBO:b~ AWF)+MK Ef1jDH\ s.Xk^[x޸Hi[ ޑG˳ Tʴ}!lJ86,65zX`Kt>܆W oce1X1a%M&nk]R_L$`#9T{in iSw E6[JPa`7-`;/'VZDuA>>RZvy\+`+MejNR^^#$pJf\}--!܆c# ӇT^ X46 N9ŝ4$N38r[O fct7 ).D9\pA(15f>naY ׫gSu)唗><,>層yF$xAYxB/#'u * K#?Tk]mmAǣI'U 원+!QS6x9XKb3 <ŌYrWfln{:vAU9a6j2SV5Z)G[C}'v1TĖH$7i-t5dθM٠3WTaPQm.Gt:r^Zk #)uQs(Oˆ]E~<7,n9GWQ oš-j"ſ0o>cbBYdY)V;|PI1[;S7-rtZUKLmTX mQPweYm.Ėy N{g1ni41pz5-b9J7) 8qtƝrm54nHN+\>N+LלWnn//*,&M!dC} 7~_n_w} ^~T9,Ae4Rq| Jwxɳ(.^Oϔ_nd_OgF~x(RQPչ,%/h_LerNh_I(AD3nUܡ̄ $iuZ\  Ք"atlq6 ruѥpCxHk#*pj5s<55%!'K0q*)K]=8 QN+3i.ioAx"@Sf|N[6-iƼb}2AeKS!dS|H"{D1fI*4,-Πq_Rtd%2aݾ}S@lC4TB 8mR3WPX:,HO.Q8b33bܺJr&5M~rUςr~ +Kٕ@q"QWȽBH]eS{I>Jh}&,X4:U]yғ͜+f"{NʄʖXnnF(K3g.DufL;5Uz!Plh>I%i–ڴt"2k2ȸYT̎ |[ )kѪt^*YDO덢p0rvPMɡȂ$$5d_$(J6!I=idtbeBU㝒pxaVmP{<+6Yqh})# Dm/SROCfKSSQ<DZha-v_]·G jvsۏ՝5κwع>J'Wjv84^?nX*Mcp:DێYAҶSvSM$QŨ ۺU8wf9f -Tb/ @5zc:e@>2Qp,6mcshD1@zٽ®b(ĕF)b2e&46m|>g94aq$Mk㡖w1P/ }ZP@6!:ɍ=\D֔ǎNOd'S(*/l:,fEdAżxc1wǯ;`e( W%?[U9NkV^BF GdæB(S\q ё?rG 3l\?Dl3!WmMR1{%tQ)IɘC*rg{mk7AMs]{Ev߫~FVBѹ,iTl]:C݊t:&%}lhŦ=&o0Ihj 1VHbк8>6뀎H;aK0FL:49vu B;0a:!JX3i^5AD%=!c.LQT=BlL@y>,ťiKTBA:BuQqXW0*fql:/§|菸P2 ?9 Ú*1 c90мtzQhb8<% VSћi|'l7l_JO񈬱м= G$*_4PLXHs4õOJ OKI Tͦ-\}!An;ZRI Rno޸fC7b! ᰁ<~lz`@Y8{`8CHGwM{FkILg`).O1cjbEDb㨉V7}9~xci*z x_+a9=Ā% ,z爖v @Bu/}6$$k~0DDWf=-cMKCaBjذz1oQe#oJ#˪9'hR&٭N.1rO( n`wóҏܞp1Tܩz\ &@i%zjCZ1!݊D^^quCtVKZL㋖뵚0V m)AU@kNɨnh3[ G$o[k| B&;*ʈAO* dhsQk5 ґcɈ} f'K+¹2ޘ浜 OOW6?puwuo6A??}?~|ӟۧWo^ݽ7i-OOx|`o?/oo>O~୺GV:/^Z?p맧׷?oߧ>~?}z\w7w?3ۗ^ݞZ}י|Www߾:~/ǻ_ׯM~㷯4bH AĥF/ a9PSl̢ ŗ:Y|' E'MldkH8MydԄly*ICʓyрdIs,G8xL?i}C2XLzX؀[H#Y|U``񞵱uil!/CUe:IzXMl;C 9Dul{Hrn'B|%Z/TYLz^w*_]•&"Ze0T{uJA8VUom %i&uKGh: !z4m,$T )/0 pl^PFA[oת(E2@ zEqYs@ Vb3cY鳃3~tRnFaj*TdYpt!uZ-Έy95GaMGpTm+v7C[S>ӴTꐓI=Xڊ*of\THLB`(?VP5w ,[Acӧ'rS=2b=.CgrQf S\XCPa;N"/9IǦ6J섫#A>{ݨOJI4 J$s*V<=z|9iHGGBe@NwQbCZHX)սbv*f e]by]A>KP4) PII[DJPWCHLhiA0-= 589~X%Bs:u :DiZ4jKUQu&-m i1g.HKT)phl19:xeE,゠4=˝Qro;leO z59J.hҤw"MA>]|9).BYKw)Nf)e"dl5@n&xX=/v:1iĆXPc==BЬRgyߕO˴CTx+J^+@-S)JfVV*M(H9%$=HWT'jx6A7S,tN>c*s_ݧ~_~祄U 8g;!i 4V h#=gm/'0 S6r[\grl6wAplHp 0YD@}Ȇn-B҄di}Y,ڢ nΫǙJִ|I"QI1ޢ*@3~ɭ/Ѕ2U]%i4&CwzD.Iz \nTdZxj>DOI] hu&@ *ڴg: C^\: ӒG\PSbfIllKqUk1N]4Y KI{آF<"GrGN/ jSX.'6L̆*6,Iw4HC*sq&ȱ-|٤.hn&C¿O"2 D=^bLZct&x ovZKKp^tQwi+M)DH|^@YY?J=#Z VyP^Ӷp5}R@l );[9.Ky>بh"q!3%*|Mv=YM7e!kz]D F 1IJL|s14Z  /8Fy ynү=E4pJH1FjyT.[+ 8YU TIj2a4lUefj(Cn%UN$h'--2r(9ǃ \"WlSB_`$&b2fM.ϙR$Ϧ&?;‹%r$:5Q}Fc|,GE_`<.&.r`X})6ໝ&[^>~7/ s|5F7XU5 ܣER)xRzK1c"2:CFBD_#T!q/&;!*)# HI.lC]7 x=Q1P@5t<]#M,wgXA'kP4)q *&JDd[ BD]lC0U#*TڜՎ,10?L;쀒8tNV-$TFuA˞T,;u~; Ѥ/oK--yD5$y}X UgD/M!&OP39NX(2@Zx?)mdNE ʶ)/ 0,l2Ž%g1cb8 W1d9%}+b`ۂ| xHE vXjAXOq!똱2ҬWঢ়'pMZW`#p]J\r^3Mm完P e4ퟃ] M[ [U@%g-*G+)A=3^HR}H L .j)aόoK aak3f3<Р?7sIwi@`H A'Tl d[#Xh&ۡ)2N')T_878)z$κ,~ɺ#JprZ &'*PH1ň_jكpawJc 6 CjG-qS@@]ot7Y\K\%TٿӝE Ax%{׷U8(9YxJq![\ey︥ưw9)3+=a--K8,(npdXؘ^CiIluDPu/CvR{%*; PQ@ ʗQNj͑1>yZN9)!0wk׻渄W5!|B\3z?sLo::j ;үT7~͚]\w\v#V\/ɶm3bU]E! ] HA2/oDAģRtlmkHwǸ6Y5j ;pʺszv[څ@WU*Oc\Oz'-G A>GZKB6oUK :Nj[156X ߮崍9 [sR Ȧ:E6uFS1nJӐmXuk@㞶aab7Z274A L%Kύ֓'gtXޣ#5XlվFw ۑN eMU/.L;۳ǿq^P-);\]B'-I2Ϳt䅝i܀#Wc  }R-=E8ނpo\87#sbȟ~1楦#݊R=ujZ&^̾ɞ>x;1V)br sQ!n2l~)!S0;nN^`&Oq(Aŷ.jJiMbwSкwXSVJ1l$hAX;i2yB[ 6wb48E*9'FѣsN䛴76F5ffH t l9a^zy`)xU6{ c2k+Vh Bn3Vy;qWKp|ۘK=k9V!R"O[ r :+ԁlK~Z(h)Z -.k*Ռ<;nKgs~gz(nqNcn{g_,Xxusu7j?w8WjČs%fs NDQڱ.Ub^SK͢_S 3 G)K.fhn1DuAߠD`~ԄtOxOlj9i@U=MH/仢lnNAxB3Bv-% y|O5?%ۜm&Ym'l[lm&~C '/I$(ɶJk+ /ca9Q Bb(ˮYBhVd!^soxG/"7uĈtVƮDɗKQ!w%d PQwgư%Dw-M /a.X&4^ȃo˛ʑl axN,7YQ P;ɧfE%$^QY:Jw {?,ߌ0x(ˏ*}P6h>Q%Mһ20a̍rHK dk*3f>خH_@7 Kd$t٘(W3S4%Jcgbmý 9nL [_!l1;3k;UZ4,eUm707SFMfI`s.7VS9 5\Ŏ.1xUvKcNkݓv9&{HYy6MX G؞Usdi.%**ѝ撧 kti I96,$v\,eʲ0tHH\DĚxݭnjt٫[8j /X']l^[O/{i ϻHoϴ漈&\յ.ZMO?}m g6V#>ez=ᰯev={ T4P^P{Z 38W[t K7!kir;CB*wTPx xg$6Nr<ohAT ^@ٖ]o] |E69>&spK!kt\=xM 5I\fZ!K.EP8Yk=ՒY->++girJlbFjK07lCOyRDAHF#(wMmBM(Ԩ%bPvl'BH6!gSx5\<-&\v/Q;v E+𪅶 Wzfe8eqmg2M0*_HZ8ul j-Ba0{֫|/,[XJ\7Zb,Þ91P!_yMSYz3t_o0Mljn]@³Rd{K= d"hY7]]єTV+ :ݤʻJP(G"6_)1{Ợh/AЪa9}`.K.QYu(\mi@E}!Y=NwE/Ki1Rpn]{Y#v.50*&VįtXB֥Q4bFq'U<-nU@ʎʫdZ/"  Bl|Vޣ7eKnç~T;$%mQ$bwRE4mXB& /ݤ3ܧPA^49!'pB^;(SD8$:丄'MShU;f3:J WͱӴG yS1SfP.j4 PK $M]?JP 3Uq7eBTË#)z/)c# gn (R6;Fn.mr5?g8A:LN 6vW ߝ0qvvm zNÑi$Wt}ˇZ%dz7ZCQq}kXb YŻL{ ԐC@+Ib\'c {"ǛD4>V^XGU`H겞򳪯qn3rU6DTjm˵)c#MahS+S%v5roGW¥8Fɂ R}\UjMHЋӗFtΟb 5 2h9N-|VJUGAk`xTd.DUQ߶\.(AhERX{uuw};;z4_/9~ߕwFsx:#lƧ&;^$ڑs/+M7^vU{D3H"KSgEPNg/tpF삖7KH*=fEOqD=;޹׺o(px(MEbPk #-r۸lv4NE(F1u6Ci}NlbY ^ZYHj'ɥUvC81zw;E[`csoYЯ6h;ھ 8 Cb7,À5!OmolMd1e6.o] V21K%mP&NmAXv.ºBSQi2e 9摔l #r$F]kV\j'E_arm૩͚~ -手 "nfkMuO@`4-`( .K/QR%g#I5 ~(Xݧ}D~?|G9{5| ']I5f T3ްN5S>w0ZK5*D'4ps[}MVDeSwS'3Őoz\9R]>cB'ک1EL'w/>NXW7s$F&^U }4,Q/Q(T.TLZ;WȠ9dYFCs9 {(i2#|Lԑw7م(d\ߨ鼫/-Ӣ u8)n' &wj-[':W0ç$I&9L׼x6Sn}ߞhNs/?h &/9~ _jhK(4T[U`Y=^PVQn+X_=BVYz/(U%C@BT7m9+/(R#|.{*E! ƃcMj~D/:>5nzBb z/x6lMzDz}F>QTWg}D>fuQt@iˬN-f.2:^M*4?}.Uŭ3q4e)L(u0ۭpYGL*lp SPL)vѭ8Ss/{/Lje֯5ZPujɛ1zCoyz&MsKPӸ>tpcQ3a/ mB +D1R#mW9l ƻ;udu/KW'%KۃuП*:# Z59Zq1&2fz "S1ސN2e-(ޕ 9~^Cs eo~i%5lUr{k=O ; %'^[ ˅˔gܾWzP(6v`r5=g\3u&4}a$bWCx]u:P*^@ A.Mߣ4'/6me^EpVƱ_G*V3`,\jipBC=!]koE?~szwH;1 H33\!ߪUU^&kGl:Z}>\LL_kӟ*]|̔s\gc:b.?r6:>sT*Q :t tuGw·gVіxTaY~CqffX)uyab3Vw?iuɼ~/ =XڞVW a<Ѕ7yԬWu&ovySio6wZ|քa31 a}_k,M{yzV=^qtC,˔8.Oy z܀Pq`9;a!M|h$:s$fy==,/{.;?u8[y!my<:7XBׅZ?d0c"`}Fgd~**4x1EP998e}#9o3u|.뗿zً˛gϟ?s__߾6V^}oǗWoxs}"57?.~N`_/?6S'Fp?˿={q|7߼}4۷_ow^4W?~/o޿{n=5>I>볛ϦOWOJ߽~n߿~w_=^~~L8~g=>ߏ/ү_|~L8~f14c7d$5C嚊^tܮV1eOwΦ듴Ж {R.7d`0gxTV8JvÜ TQbˈ[fa7Ieڈfh SHsNG 90np !=7C>d[Dx iևTb*Ҭ6갢 ;<>+x<^bWHM*-+jLU曈&\r= AKo0 ݥtUd8BEU%0:K^oTļϏlU/-5֬`n[PhBiJ3P}mN9:(E|tI-'NS]8D5AX/d D]E8hr" 0i"6EEж4LRڵ>g;-C2*5 5JM#qava"1,y#[}UA9R-)tyCT&[RYc!)5Fen:fndzp",AJ&TTe 9vBh7`}iNS:mY&mtb`8|h~sCOSF |Jlk&=V(`+)ضBa0D`E9Zt5_N77nYo-ƞ8v MFށlT6pXr^9T5y&=Nō)307Ĭ#J LWލ5rNzjF\$_i@`s< PXpw,կ#b3of'n0iiBz *+2s^8k1ZӸ=:?g!:1&ZQ| y`wˏtd30H3:Զ9*8{jBXq>8J>,sEZj.LǨL}er 37X'<>PDΜLR~,MYkC*~s4a`Ud&e!i@ElQܖC4= h 70e}R`plf4 TfUs3*o f5Ev}v*Oll7$'qsE&U!&v zA]dIcJ ڔ?bʘ}b926㣬V{v1vihUFy# fFȍ2~ː׎CzXزe`Vwd(yL>Iulj~x1c ۊF(9w$Ret5YV7LkZ]axۍX֨=j>/^]C?^;?im06'^%SǗ{"lIĝC˅yZe;o_FH6{/ff#'KjP@hHZ\mZBY>0P:JTY[1}HWqOjGM0B;n晄:%f%95;,]&Hf< G<̌&) P$X 㐾zyt"Z}8a*ʙOƁV$zfيf K.fHf;Yly5슀1AV 1jkM'1wmYx{; kͬlB>en]CXGV7l)̧LU]#Fs&HxOLt®R!³b)@PC%O\V^W~C̲P⭈8?.Ƙ9@V)2] պc { kxcSbwwR~HY|e-Ƙ GU1ùM|̐x6BzrQDIlgy8dWi23nX@<'W 3Cd.!Xe;.2oD$-D)l'9Ӽ$6h"wE(F_uA? 2 Sm RYNF-3=j;𸝀1^,d6{7REOgwqǘ~}{管<]}~} +O `<-Y]~U`w~&l)YYY<fazdOXr1? {9s9|rWQdsZޣ_.9af>TKҢӢ&ܞ Ћ`.0mɳP$LFdDS"K-gPxCdhg@Aꀘn˂ yMc7q(ϡ,:S6“,rAr'gHcF4.ikFt 6F{y}2OWgӊp7Xc٩jAXHh;.Sp=40<">R9msW[`[F|/R kÍߑVE!ɨ1l88XuC7+ յtWt]pP%5LE2TkAL@;ƵmfVc]IR2 5d`dK̾cB-HS0ȦX׎MrYV&ZↅOh٘\/%U5 Ѣsy6+KfP#jaZ*D[:Hjgy0M^hw%HZu3&sV2;qu 63Q8} zB"XY<:jˆ+KFFdFڛm"2K:L8Iɜ|i̕@g^7 Sax*Ĵf&lg)BGȢ3 $fz")+-,w SNȦ:1nr$8,Gjnz.NRUD&FÓF\m ӀWV$jg3WNtVy! $/d}{mYM"q/gHm7$!L|n){'.t7 项nv5DN=խ _]DwRь(EW hRb@&w4O^֟VFK9/G;, WtՅNNMʁ\HtFΥc+-[# gG7Xv5oYqO$e!sDz3UB|:7?Q?-h)ճr\ճǝm6'5g>ڼW32X3:;BYܲ`ҕH[D5C5eUd[bvKTֆׯ7+cK5y-,< _]Q$,F`575R eNIú^Ъ94c4 m Milh|yX]&+I 6'p,L1?نqv97lr /i2뫔˂5bpV Y. 1DNra-lV@DR%P+p˂Lf/,ؤ!hj0x0Rhy.}M .kY$YgL۷RlY\$] .nNAt#ĬE*1줐t+@*@A˞ɠRG=~Y._Lbd/ 5*i)L\ X DeM)j!W{ Wvt^o]bƕQ>Q_i.F6005MlW@0ҶK~ƕUs.rI-+X"S#sWEۉz]UGgq{.ZqmV%!;fʎ.ΏB31sy#˲l#Z,:s &EȲ}L~duW݋pe%eі[sdU|B\YIO%+5* W7ƕAji0iT)˞F@r)'LY^bXpW%ω+iksŒY>VujJ*WU;HU\,B=RwYf%32Q(T78s& 8ҵz,)D8ռ(RmsTf< A:E5)FݡHt@4 >Uƌ<]Wyޖ\㜑AR%=  (܀4bYPjXY#*2U 9ϗ6z}n}YaaP$,L]5ng"oDá OA7+-w#+'t5r,ێ/U `HAfYZ:KMVfLֶnӍ:YĈ,`-"KK0rY'V*<[%52CO :3ÖE!X1g 6i Sk,p " z'/:{ՂzR!a4s<7(PktZ wrn o2FTfV9n ލU-]/aƇUMz$1L_FT l\R"Ou9.fzS4'̡2269L[ c'VI(VVZL;K3=Qa.keʖ>hF b>%%B Ɍ1fLowԳBY sTQ[ ҧx:7,뾰|Ѫ0v}cF(-l‰{. f$j0&:t5M^dVMWG6OEZrḣڹEw 28Cy5ayJM"ͮ8dyD z٠26Pw&.f1Y*.׮ˁF{>)40!ҬcLk:DBdU1 MInKTܓqObClZdYce*kpnqΤԍ% w&UJM% {޳Lץ)c ~>\bQ^UǶʹAu5c#Y]ƗmC4?Q$v5BC#$]koDZ?|?Ew64Vd Ȍ# QE;]ӏDggqNUwW.7?wwo~}7o~o>ջ nZ]~}@|?~ݷ!Oxy˫nJ}۷Ϯo.r_-?~o^3BݛWq'0M_yvM)23!,ަ?rngvW}Z)ݴu~Jf*_p zyrwCNo ~ol#s)K_1;=yUzS :f5Ryr#~,ЪNRXg5+7ELb^'\`vF4PP0+EP`bZ`Uexˇ zgUˠmU.ЇJ˴.k5iVӇ niW˶\g aYiYU*ڤI gyV6 z=/A^t۝Nr[aBЪ$ˍ\zWg"`BN%\G;kVjOC2Cv}OFk [>ˇ:A_,6+Mi)2f}GKVw`J 5j$BR鲰NKt}']clfJA6i2Mi[PWx ]O0~%Ů {[w+M.Sds 9}2OI1!;P(s"]9߫:N#3\l'vOpF%O?56/ ިe!Z-Fʘ  }n hcȕaTRٜ`o>`5̬; L$E!yV]#% ]Y4 j G.`;#酠i.&nty Ss+ώy嘇: cy``'M ts3rDtk%"ǚw&J͡V$T()NNWL_ A/rWL&3CPd=gmW3.ǴS`KyEK+2lbcV)W s>_iK$!aꋱGO Ȯ/cUN9bz6Ɓ,>+)+-cB E,^Z=C3U@ő4Y 43b+ȫ+p9/u)sC}Ӳ j|!]2i< ̏VغI6) rhisEVe&u4'Id};f2| U nJgI!P,nUQdjBcY5@G ֢/tc.{nuUr(# Oɕ6{hI Z01\2%92D49jMju(^og{{vbO?=JˋoRi?|uۻۻD^zxʹׯ0Ɔo~xLJu N8]}oo~ }ۇo/fli \xxӅSˌ\~})3p@1s4O)gJ&= Il LK~kGF=\@4AX/!%=^#8f{hSc=V`: 'Ci0CBQ=3b27claxۤc3t{F"1ũBC aSBTy|eJTNT J$=0ǣ!ǂxNrt{7x<^3˲EӫiCxr# R/@o~0@UB$29m<*P#WgJe-IC"6`'h7MP\k&cX'[,Ɔm\.P?j)M-uU3Wva7b: hYWˆ,e3:J(B6MR3аo bu`T=`E9$"DgP\ϙ#C}sQwqMQg0Mފ\ UL@VD>n M"4zJ(¿3{ɾLXIPNyvԠ-U rs-,Uʹq!->!ve4 VGDJIO!C'jYΆuRXul;Iyb.;0 7OR5K% )1NȉBƪQ7ɠ.K|̴"*,.?C5;R7x@ \R&-+ l.DH 3Kig9ʜ`DÉY.7>=yv9r/ wwa6?[˽|.7|}3 [o(V\{"ݻزLAsrW&$ !fsAgrKj+GJx,.? GckWWdq1M G.:ZpkrZ[}X6Cg ՀPbqBZa07sQ\.t\)}簹ۧcsGB͟.:ץbO%NB6WAaub*Z4T@B׬1<+Z`N8'dG)̄liPNϱw&Ú9%ҵLClg?&E> W-W@?9ߊUhS6-PI] (t X{ɯِq0~USef@V ILMk"9z(>9l`9F4t:%F'(񺓄ׅJ>Ev]5 ߦcJ:ȇa9$P\JX]]-+ }QQ.B$ +LxJCb얻'tX6d a55fbL*Zp j9U4t(8ٍIf3DBf]^Ϊ$ey>*4a\aI],]buRQ?g-(E r7뢒TDiHAOh^%w}BD['Ւ&[=2~ד{70O=8 Vz^?ݿ{ǿ&r\}DBU+{$җ__gr'>?.]N !cusU`A#6Kk-)4rBvWU,C1h;rGպ*OS!#W5‘.YcM%{Iba(i[jȵ1֞g~'%aKlNRJt2hNn M`xrTjpծQ\b-e_DPKPGOm\bFUtFhpP l_+XqBrk|8RŊdGr|cXį3vϮ&&R$~Wq!J=mfg?gvO~pFj3+KG\ؚ' ws6A[$u890 INAL RLڶpG - Ǵ䟠gܽ8W&I=1stg<1/k4k1`y0Aɂa%CKcJ@U(5 h|w`5q5:`&rԙ*A+I՜FM!= " ECk<栙 ( #s3 []Z _Y S7àk"::,'Fv^ 7a!txa1+rC`CΧKz䣑\N̩cvхV 8r+fё#pm@NWX|ܔ+UAz2 f׭W&Snv8z ܮ}=,m, ٶއ33Bj6R:hg5&*,-u=|1d#=2*)Q}]d&o,f {^fppYJ3A Bz) 5 i##!nm5=xA?`no4:JӚ +7PoƵ;_V[@+HYfDa6N&dyEƃ15K*ItEX,%L`r{$R2~ cԜ؏#i:9 E) Vϳ!%yY =FJcZ[M9rγz{vq~]^^_\.on./zW'/*$>LLJ7ݾH~*Zfr]__߮o_u*6j!]`UJ{R&xEf===hxz15[rȖ[jZmxuiAjhq1^w*gftۜKjZ/eMҒ.K.4֗,M{])_p&u6/u܏O_]mc6ӒzoS]Wgo1/EAh3mM AhK)\?d`jLU.c: r{L{XД{õ4-ѭð.O,G߷ b$ 8O4/u-Izb ;f.s7!p ɕSEӴH) 8YfD rR T(crFÆ ,1N9/n RZ !S[ׅ&9s5t&w2JK;e%u\$7%S&BrߖRGp-hxM[OقN:3#Ȉ|ZqON?` y -Uj@鼪N? /G:]rFcLVmSc51zZKmT"m~Ry4fc珩ZQ"`};kk&>3MϷИ shL;WAB`"xO6rE.F ڏMi |cvCN닶gr"X8 ZOO;P=n}L7]i=Ĺ0+ZZRƂI7aU%0'Xֶ$ ܇62 ?}\bL_/{9#iE içv(c@]sc]k']8yΨM EO^Z;z؆YnÑ9&p667b|<ߴ.E1 os"! bp <ݹߒ>wKTûǖe(E#@P /Yp*۵Gt- w 6偄n$ 5֞C.ÊlȓoOnNhrEo̜G^ j{2<99';y;3\~wsXӾ ڔ3?<;'ѣ#Ї>bZ.nT_clCJJ 3*g#ML '1Z1߶,ͱ#*Ra +>]YgTdthA#҇tήtzb inC)6;ox]*39]d4 g0,jd.cTꖄ1jS/՛q/՛',s*=}{m.d<!U1Grz݉׏{D ]VJpXє ?Xh0+) )đ% "v9zH:ˋNفH4MÈi;ԅ7/`v3 \,diĖ:ɝQs)'H Q[5Kc\ *%j"BZ^"Ev9\gGjz@^J~JcM͕5s5]h>ް|px)$=gSaW-CL0:]z"fغhlJG a&s7`%FQex@Kk^=~v{ /QݎE\EroCFAS z\7m[,^w$lVMr`SpFH߯-fj;p^N)XVoDmC 6LdGC z4I̒<uU"gNh" kW#37Cl7eRi_mm^9lISw :=V<ܹk;-秾xMUAђ p\X|9z`\D73*mU7&b$NpzЉi6cj "Wz%vIeyhc":2A8%twLKQ>KG{=xC։@$4az2W<92U4$ƨ[]B /Sݸ2]~ƾ*Ż`Pa>x[ ;eꁶ2dYm^ ߛc01Ltԭ] n}Ozn/ޥ޽{/P͎}NFk,dѧ׬4̧AXc6J 8.YzϘH}e2'f>i@`mϤ=jZ3â4᫥;Q;" B9DP!E֍Qr@!:f1g~ݪWyΈsw&K yɆEft`۞>WB[zyDJ5!N[= D 'ch9 Axr9IjՐFCv-90v0R5s&w$ɪ %7 -UKvgGq=!kUhTӼ=I)rC20iM@vǦњ=0p*`bOjlUp eа)ͬ\IQ'j8a}-=J}6M0Ϊ̝fxbSN:2[.g sX+|Jcoմ D>2 >bLTg"3{~w =IFZX_+,wբKv Cz W+1(-.&;T8 S6`K&"QltFJy8zXM|Nes۩F(m)U|fpbmT8V! $U jm޵h8=qR7SFFH lb:go]'rG#VK;ڡwafU5x+"+S%1>{nMЌWr#pʈer Rt-ؕ*sStr64Uɇl:3-P G2Ln- 6#Cm.%jZ@aB{ΜQ3RX=gr% "C3Ksi1#j6.XA fJ&lW}w~[G?⭶Ynj1U<=Ix:ܾcX'cel{%!=3mMtosW6tn3/<5ǯ< 5V>x?طt&?r8.%̟>J4GUS$N~TlI)GysOUj\Oaz=Qa`is{[u~ pwElw=ƫy(G%y'5e|t.3F`-mSW<1n*v/Swrmf37@B)T9 ʟ׸wo`>[~r, .cKŇW߾Mx4] };?&^'Z8kOɧJ*Mpn@Ȕif;%n$`8M~~&95 vTllgCEeɅ[|8s8z@BCc.}ioGgbh3jG|eG+6H'ދEVfK=-(Ff\>gBthBeW_q)pGG0G>!ZyxBU)> ҧ)Q*`/yqBjs@|9~b!xxy(gAL.7m `Gog֪8AhLk>3&aM~[@w%K~jqE:o@o#|x@q>> `' snK:wq҃2^_\M hݯg0jaL;@{8#g,\KpgxXdX٣~E4N~`gP(CVo+rR\|nFT8d8RY S&x)[O(djA:H+6"5:4ƍ*#د)idz @9׋cdBA:|n!_iA…+ D| P /BqYUDCJ$Oo)hc\IJP:OO :C"Fi3k4.+P c}LYɯ)R`pQ߰8 'DpB DH\I6q}g xEG&8cR(k=+#I4n'W1'BN cKR@ө^\AkEABL[抩^-x&TA"a<Z;WrcѮ![+T|7" )ed<8T"lZJO:Ղ-=$Ѱ=|!ыN MV$P1L>ۯГxBy<¶ BD-\Q.x#$`BRKdydlPPg 6VGd)VM m4RM:/m;UusKd_߽wϔ3n2g/߯//4/>O?~/Nooy:}Wo.^^2J[;==?{tz[^_S]$_<}:!H\zsB}_('w=>}yͫ7wOwo~[t?=x} yc|OW/Ny뫋x"?~9?|/ϏO_}x}x?y:Mׯ߼?7o}ׯ!YFT獉b,g45t(aCno+ƂPFIY؃Yd<4]kT&20 oÖEy@" Jz9٩W`M^;3So),}hJ,I\?K4{IpE,41 WQ*O) WMZ.|h ,gl6 =f٘J|舉UyY q d't0 N!F#B\V]Pt |QX:|Gt^9 ͈)TI2! 8 GKR m ]Cт7*\Sm51/ 8n&mvP;n-_-zE*SWɍ Px=Y.*%:  91lXb٧IbAUt( ;g*B Լs0W|m ,C:aȶ4E Ä}ae/t #{2x LSą{jwr"+LT2I@cӢ uxH85("]]G6^LᚐB$I@;-1qM`4B^xJQ.?b ϼ p>Y,H)ǓW9>@ JN?#Qo Xu A<[&ufC~BxC4d ̀.$a3 *t 9USBk{]T%9դQ(#)N˓$7P:C•(֣p!}8l(zQdyJ.CrHNY ]&? ,{^ l;5T~e:d#OD;v(;⇶ ų- Ѻ/&E]oO3WWOoU[v</vAぼmvA;tF繚 U#Hpt5!36FMtT|5!ǮM0&Ζl{qM¸؍S8 eBkZo)\. ~}8ΪF7%`Y֥aiqn*Ңq6 J-!))K|]V~oC3sB=D/N" KL2\q([brFDeOZ뜮6*0Ou쨉$.`v5}" Ig$d6[8A9, 'sg܏KQq&i7ُ V fz ~uUav1דqF $̰W:mGDk6mzs$"H! 994?xNݿO#D D\iL𚉤5%sSwCvaSzlҳ+dYs+jPcc;ed+)}r)Go vjjU@{PUfS$X`iW»bX?s9xoft BX%2~Rfv41O21h@B@b Pl ="F ֖#TR}Qz!s2l$fۥ"&"r1(!x\D;yrn z",f.+ ߼u#-gS01FaCW@@j.wDғ!d%yLDr dTB0:aG(,O4|3MCSyg(g󮱷Ќ˓ ?}(%Gp|z#5-PyYK٥Vk5D04@`p.7 G~ϩ<'-sqU`ً?$0LA_Br6#$YMP!$ә.U3`߂oubSܹ8[( V lWm& HՀu0̝zݽ9rorrUʁVR9 [!% VMYṱpbvg&8':r!UҒc]&iစUk\ +_w.I#W$!F#ETh{I $v&x*Ф $j~,ڬ%x"ؤTfSy5U6s; ]H:WyѠsPB8=خZ%,X܍|TL!UrMu-f e~iߪ'@ W`f[E@CJO<$a yMk=9!nw_d 5#h`}aD\jA<maBIcN;ڒg`]Ilg$38bpfm7-F Qؙ&협EiiR:JS\\#Eν;^3e?/p yt!/ZG8,1LLzk'HsbUV;䚅@@i3XcJd-yLHɐE i=ךֹW?YCY"IѓKa-s-80a~zB*6ԪhN%>j[ *y2 {K&b, owkάې$r:qxj1ȫn^˻`)M3vRzU;ɫ/Tqƞ>̔ba!O/yGl`Q4 3Vbs+eX,1Wλ|9:1Ye.u_̜ͻOuS6=$ȃ3_SܘC{"%ԀnUY]T#pm9T.C0)"˪߬HhǢUW 4@iR0[&,j u9HTg8+ٙ|.. @連xfr1PON tQELړGTq=~$t(0_9W&W$&*: ~%r1ejX䫵7e6h0x^bmi !$ب]+i]~ e6Jc9sjfyver$.r!voL9x-G8#1Dĭd#9,bKfuG[I&qiao,ހ(ҹP7sg䎪jǎ:*zlX nS=vdLsLknQ<97,QwEs'&,嬹"ފĚ]js ;>ffA$=wPh"05/֒]ajrNFZER؍2T6#'So 꾺b_[m.oF=]#KsIA[xN`jg+x?5kt. UFUO6iw ʓCe*UMrFг; YTR*1zDOήhGn/VЩ9"]}`7Coװ.390*UzApZ29O+ S!I XKkg3-LNȤTIH,VYjXTl97A*sow3kNoj.(smbeM\Uxf~W4C,uzVzDU`B z:k'd.ǪX?AmM\:-:mǍԼ]ܧ_\0](gpBC;;Mv\{Kd& Rb3 ;g - ~cFu+RQsn\ vh zn%dBDbgНӥ,Ko2/mQY6:4ں5d,T.7TNX\O'Ar=e^hRjg2֋iO?YnhY>SeR)VL,n0ihLoC#9cgO$sT[IyΙ[Ro:t%ǁ!qPMIE\uc{{ 5c{1La{Lj t8YI6\>bHzW/ Rp) P,3R@$kjSDȠexn%-Yȅi¸z"[zX6w&&}L8cKR{S)1*x9άwbЙjoJ-YR4Rax: q1ev~]R :e:~Z@QI#W6Ig_S Jҥe9Jl`Isy=>F7+/kSy꣪@Bjjދ++jR)6+n(GUh$+Ty3zj,?G!%tAqD0[9zK^ Kvڡqxac #`-w_Fj3^Qr-pӰZ Lj yU[I|iM?x?6شIZ&F1+r,{PT)/hrVΌBϮ%qRZ+f2-:¾zf~gPVnbe})k lB+fyG9WB U V۵I^ ,9cU$pC-ŬLAIql9JP ̲@\<8uehh83r^)vi<4nX_ 9V]m_'͖vjI띴N 6Anz_F^q35ZTI"-48nvVؚJQ79f>HKVv:)1hHI y3@ԲK,u6`tbv/qY1`Xki̍Bfqʩ @mI)ܰުU4(T L: V<-f^V$cyZSmҒo,:>#;j] ǣ pA'%/Fp_HkͰum0Ok9.7&9|DľmsV7H sNpլK^u{[LSUŔx {-z(ZUsbim\5!Xn,N@iR= >p#A{;1u%@&c;9 pvV'LA;jv(qKWEpsôihk&iEsrgr3ͽ8Y 9YLwgK2hA+'m0G<,ֈO9'%5Yy4lE"U-ƍ"lm|"yK$y[&e^-%_?Vf%]៩tj3S+ƒnnU#T" : ˛̞qv*"hp3'*r޻r;1c[~nY$^2qc`jr2qV΁9jqIS@֭Pa оxeK6'@zZ=~{}w|}x۔7?8d012KBk!|ۧOwcԅpqM9a?^}o.}kuͫFvgT _OO͓R,į.^MD,קۇWE*1o0Q.xQD8M p\cσDFA2wW_ >!}2^&kt`\;`"DV .~뇿i-(43x׹.- 88\ K S*pTL|ߝe0(Z}9L񚬥^J~>/X 4Ր)zY @?>%BGʁa%A4exy5E: >YT᫇SVq$@HpmG[6WѤtQVyΑL_1Wn̔ņѸ+tj.>mFALd&Ѝ8+Sfzh6IB&"H'܌̢pJv 1,Dv*_i3 &4Qvy"bR406 J]ɖ0m63Q%7ÈMK8:O3EJ1/&RRavr:58bnDɔH%ܔ!*lySؼ-ķ2^5z܌|nMY63*A"ߧ G[|)` RZ+N91 + |> "",\7d"H3s!.IYa^|5d&Dv8EA9Ԯ@kPPlTZWGc2WdRmQ!O6TK`7iIb "\ͥf o >E7Ҫfl 馐l{d+^v< 䣲x֘a:)Ag)dZ\X9"En3XIxtQ2pDiHx zAdH+t4~A"*YO,$0Y8T҇ MGRuzDK]o-?! p ')- RoxVrI. MN|K /+zJ$44#T(%ŤKA(av]F1hvGPd&Q٦|35ђτ 7\h[+Q=]a2șɡq\E:](Zarl3̪zSzzfX +۰i@YWdGq~ fofeጴY@Xr4tC̋U 5 dE)|++E(:+t[PUهPRrgҘo׭j#.D5=9fH&1[狊y?s9b-j#$g & 85_$٢I[d"?{r;?>|I\I]q+YTaJ%R}0VĿOoJ| .b˯.3^wLJ_ŗRb]* \".9ʠSC^Nd dCCſq ҽ8BC='][oǑ~aNߧ,+ֲ"sGB^2% tUO_s`mG1Ӈx:(ir7xA>.W3_/&\vZF\iC~^f`rÜg0 j`|8zq@nB3= u9yˢ``A-S/"-XbIg*rr\e@iryz,$im3 2ШM/gd.\w/0F+ͺ=DrXr~i@Ju !ёu:!YvK. xa 33-4:Y9O")EdC^]BZ^%}H7H7ۦҜ qiPwD~I7ذal199m4Q`PxSuqsJ"HL䩩=A{ <ȟMlY%uuulΊ<$17}(*Ʈs?ՙZJ"!&yM5}Hn`ͦzoHO~  )y=2;/6SH+us%K:,]8ldAJذљLbi"FH% m.=YIX'UttA0˵O{$E&nȌlǐ&^ 1ߠ ;&:!#M,I%6&҈mړ 5 !0:A/P\ԁ߼;(Zr\XTG[m@X . FhI{>d-WyiM{:K%cl TL͚ծ%93aLiP hEA<iP V k YK,<djS3 CЊ]0dɼpP3l$IXjUd40k9Yʶ!2"QLo`T\[O[.#6eFwaE6t#7301d#+FA~ĕ$:iK aHO慇Я Ioy'^~AHYNL){um FA 1rMo0A_)Ȼ&oBO$Q9 |0E(G۞.Ҝ'l婆6yق!DѢf ,lUe֗6ILVœ IPD& uq^.$3)Ma9aQ+eAm ,?P,(՞r`ءNmHGլC9,G(dEq'XA (Q*Rk6#!i`P:aƳ&K `i5$EP3)?nM&s^Bx~cſt77o(7'_˓߫i!|}߮n.ͧ~g׫+|돟/o~_&p6(B6:eCX2 SNً0eE L0 FɃDDI3mNA%$ 3I;$]4М"?Fo`̱H]LGC[ ]IMY./ʎA@5[E XSCLPD,%HhWiC!N@(I `ƛUnF[MqI13ŪKbGW6& 0zIRH5HDQ\!Hۚ#0>9^ !lNgtO0r.ї{$ABb!3Ti&g( $=1uѸ ` S)&\\;U̴emJ3@2QoȦ-!yZ*s [cʜ UGSe)͙ڂFdƽ(E=?Vy$qDd(HbG5 0h=8m`4˿ѯPqj o&s浤7@^$ܐaV#A FZSLiM=B$c !%A{",0'h N(.7{wps4ε4xD>ї9 Iut% MSB7DEh}9r\SR߅mY82P ,UI[r;)̺mK8rrgQs b*&H fxr#h*''I ,~䆑0 :=&N NwLR")=L'5Q9c8N@,RFE@# G q4nI3 JIXv$ѵL rp192Y(NMR<[JN ?A$uۛ/_݇E9}ZZsX:W΄[A2s-Ρ% $SYBnvVr42O[=s:W(}7kNU$)џ 9d#@ ,1žrIܷ1M| RƴՓt 5 ΔP-N{ lNMA)1JvXSlϐw(-XA H}Cm{4`hO±܃J,= paT`؀™bX8zN(1!A_}77Wp۫۫_?$L//hh35 zz .^_~qfL?_I~勗//^.._|ϯ./xfap T?z0X^9Ch;EU:Er)Y HIahLS0~#. 4ȑdˡVGFˮaz(W)1US'$!ɍ d4Q \2zM N+A1+ob;i@|sFsdD15InQOё2`Mͦ5 6&)f@b[֌s4s/Ӯ}VU%TvPt7旑TEe,bfBnaF+s]hN'ZFGbxdNkKRQM$5D}$3VAmAf]vȘ&ho =z̄D_m.o%F\`g 4pv?. b<@Cc6a@ IYzw( UI"~yF{Ѽ;q. zL|bc0P¬ejatV&k]*i3FLY™Y5"AGEtBtϾy@4*uCKg7S;RŢн]+j;tIʭ'(ʇ` /Sp '?p\c"$ْPz@KSK&|Y<, thpmCN =ϦCX]pYX!?@=SEf!K KW96IA$$p Aa6&vYIT㪹Rc5hsQ<ic|vy*fe(/bm7=GAa,yJxegBhkOc(!\8"c8ZM)YXAn߮iJXLHi?ˍ6ŷCXJs 0D߱#z-3.8fkyCS yt{$Grp93ZF(w.f^U h*;)J4f)&(^znj&[g%$mQ rL`*.CHku9%PD\*8# 6rrLLSFa :=Fr`[*T*G`Ӭ0ZU+pL#h:4j⻐{cC;MPn<~Z~J&[BZ'fI#=+=zT`\h[8z uɣ\n9]ǽ@6Ԅe?*ÇubcorWR,=AgtA~8PؐXܶC0egrF\a1֘x,V5&C{y:U @%4~ErM@J-5הZ)IVO9 )ɪ`,*Xl8^@Js4c(H%M.oB´vquh|KA %ՙ\JpRlPsᆼ.|F- 9ܠ3Q9|%9K$ }hj6!fCSLq5ܴ!4ghŌEϓT8设T G?ѳ F/_W`4OOC߿_~sfݜ~LJsǧ_/g ^V6|;Ÿ?_v@ĠէAY& ]Fbma;r:>.5.<}4O{iNcb #y6iMPL\{FJPߐ)&EGHzdc cT0V0vˡ4ߝt+cyHz^zo|ea#"Bmrԯ;Ė-Ut_۵UbC[>'H56#RKRI BT__Gϳr]"|6wJUʼn4͍8^?Ci'cp!LlEŤMN % 197-ɠvCq&*\tUE~o0Gel툹=WpkU>(e5uB%TaHepmVS3e!">'S \V 7!,T脶}= sYlz}P> 3)%&PCI8tT6DJْ=-&Ej%`V5E+˕5OTιniƒhlTQbCoѠh؈R>~ʟ\0_97.'ݜ/fˆM OFLS[ö 2oZ`=[o纘m0BI&g ݔ[mS>}nLE_mbPY,#6וr,Oa0hÓ= b(] ճW_b$( 660 FyƻWߜImݙS)r٫Wv `R3/7y'I5m+Sԕ%I Nꄝk6: Ȳ[[#XDR>&56Hn<8aEO.lhl,6K=i:ɷ;^ABWUZiVydw]O2XuxSo(Vtez*`L^,;PC[lseU~RyL xly{^,{L7[efy5cSE\GMYؠ<6&ˣVtY=C)e7yFry@oIFwClg҉ oycvUf.3vZ-*5j'> .g7A\ӳ8t%Ӈ=  [t>bV*Nj}y4DW ǏN:z|yٷ &N rv]يM0TA%z ( sMGW=?{G¿n{i-4',7P>XhP?G>Sa?g?oO[;N h~pcs8:n`}c:RneUchA|S\ui>ћa:0=),ۍ;=L䶊T'*dɐm8ªe76{I{jFN̴1)=su[=ڠ18=1ۏ˯H/"#jأz\nK_?]ݾm||C>eYFܪM燆c O8Pۢ8}9_Cks"r:Xf/ YqB wu$<\p;\P9 '696JlK+1 G8 7"ɱqrExR>ox 1N<<~gk nE0G5^=ti 9(^f{jb:òjhPrM1hϡSkv兔|#E/EՏY^ &PHp')o=Nk4䪏knk4|x1h߄![jq7BY>y3L,j\l bIzFlmn-7"}qc37/Lb<-I>S]]z$wԱu?\znV磈g|Lw⤆%ˆ lH]h*?V]d1MGQV̴m ,٨>sW+NTZBiu9]1+ŎmtcrT7'utω}9C`  ͔ \6 $$lGŚhA%7Sp rAH[ܐaBV?R|W%aJԷKnZ<0nwP;tdY"g~h TabR3_q|ވM?P"jn38j5ۦC|Rm;c格@$[hF{:c1#$-c᱌2%|Nk0%L 2cn+8|YP@X*V[偌ʟibo ݸJ̒j@UAM".Sv#Q=SsnC+l~B&ʩ<ykiIdXVJ VPPX/cʈp..b* +KU˨a\@ /Td>h_4*?28+NTӂ+{ bs~߶v-7JBZ^V˵Gm7[; %9գ4fư+Ysed{q1L# DO d#.E:w$Ib[Q6Ȉ8wv9}"9,ٳ,P ~_c}'\J5QzĚ]F8 Xa&]{0/e ub0axɠ)i`Q7&clR] eIG_\^6QҶ20 LUObs0`>_>nVq f.C!lk+uQ),]e߂vWrmr{񎞟 M4A<[lB4<>k!_gm;>f7.ضϊ}Uw._'aT5-чoH|.<7e0!E ɦH}s"V82uGm]"b|:Ifawli9o8j@K$$,jΑ(:b!MBц6D|hkGo`!5NP^L*Ň6gmA<&lJLimֻ<t]$5,꽛^#"v0~LeTt;¶ÁnmBطm.(;$Uip}lT[m3JH t((OLz3oې9.ɰkCrn0]DVm]U ]_N"Hh#@}n܅v=abE/I;/H..MF9#-BЋ.D]p hC6$X$bܽ!5 JL*l= JVvemFZ )3'a wI fJ"CD\:ihTnE,Mܨ|v2M6nVęѡQ m64ȹb$R.]eiB5sCsv;lTh)8GN <*Q%l΅}\EhS݀\ k9v"Qسtq^fKY U&- ^޹^7%o1,NCѢdd7D.P/I:&ij7{F-4bM20WʐysP\ۥK#v TWcHLC5mHuψ1[%bZa_JrXNA 8yea9Vؘ(IsHeν RM;Xl]f,E jBUM Bj697 lefDr@`xrjY@Gt#Hj Xwc{E?麵d;Cj1!2s䙟ݫ{'6}=yU'Ϟc_f{Ï?}zӻ~_٫o|L_}xg=~|W?}_n>{yZg><_}k6)><ۿ}ӏ47/{xxxo?}<?}~C?}zO^~뿿|߇,o_=_?O?^}/ūo/F?o>|~ӻ'/_]۟.~~?^~݋?]^ǿ<~~_ZLI# E W!b@hH .2$;^|)$2P9%d4%b h#!= BY0RsQ ioa@eqU͗!$y>sNxv=-*tˇ䩲 Z8q%yz"[fQbfhju/}Ң4 qwBw8Pd$ kyJѡ6| bQ(H2j.m1R8K&(RH9}H7nB J uPSɴߖp7RdC"q V5W`A| ])fH n HL^ 3=& *ۅMP=,gV~QBib0EPj[Ivm! ǁx/ Ğ0jGvpZ#`ؾE]vYdy ӫf_yHrUI!f2`h.pX54ע;b ֫܈iҩl:~PXc߂5MbESKcirÌ3nΣ|=p3-BX/|.]/bۇ/:nݭ- pZmHjS'>8"kVcdђ DLqҥBxob5caEB,~D8$-瀄6F3 u),$[#Q|m{\+Y"z(:` m+#J Comia[È *NWxa Ik}+N9 C#Q İW%S%|,0ee8K>|[>#%%:Rw^J=VV aVUո!>,< LU A,sX}'o]dJ '&<&;䘵ַ'Ϟc~ycFvٿ}],sTY)˜^}/o~~xڗF_'疱Ͼ}Yr_w>OWO1±AY_x^27*4eED^N3y#(uRѝ<= ScW-{ 5 r6&و( 1N,9HL| @NUrYq²yv&rDDw2 Ip .fd! ,.D=Be2ISŁqMBh􊃞ۅ]ƚ[-jVi=VSiC*d,(ƈ˟ Bڊ5+w bXDɋ׌S'rʌ;`̎ȝFg*ߜQyku)ko/_L?Bco(pQ sogLIa[By=a)c\V_5R4g{šՀn͸ v>ϵFlttFq>/e4 6柭N^~ۧ㟐|s|28>?T'<>/fB4jf,U#K/;iJe^K ưs,B$ C6Y4Q$i#jxDE*M Tis oGhZ [b5#e,ڍ9uB 8GJ9jiRz]Bt%ov'b:>}jV !'K aq#?QKOяP֏h[R,_[qT##3/m<9%;jpi .2Z1tz08p$ g k6a0}s샸3$7jiܣj[H!$HlB׈5 }^-ɤ1H5jcLfز>~U&i^Rt_P*`n6Tbփ0@c ڠ-hUGXc/Noh[SoQs=a/ {h8LÅempxA?hY%ʻtöP9 |6%>HPϣǥ/U9qnI3mrhӸENKz: nC{y1&W%{ kJ;SO'+e:^0矍}Oҫ`1[eU=i;!8/K1F7?˟oᴰ#{ zjHt9y^ж:%yl2m^OQypOuF 6񽸎fyo;ubx- Lor t](oC4*kk5OIyn$Vy|=uX͘W%qa2s?E,a 6fju^m*aʮ4?ʜЌI+EW4tW;9_g8 V4f7IZ{솓o?Jc־.O6 fOh+͸aCa5t92U^o?ϥ|b۵v.C|c~o#y"5fw؏x!C9y|MyA#DB2>ma@ҋӄN9 Al3'"+S"kES,7LTC y;HpiiTDAq|y*` Q2 #=d swDh1b6Czz:$O>Y<\cG J)OKлn nlhG8yoZJ}ž&L*1tdɓ3cKj7y}*xx H::ܕ,%sx1Nz2:?VϣQ Y'jÌm~L vϦixX|FA2^䞥%%qi`t83Jd315b8؍m~ֶ"{`Ad~bS~c Θ w ,HOxc#{ +&d{lu |dm_Sn?R}p^JAɺg?d bLI'd58\?<}mUeG- Ҟġ = V_8AQy(B%Н+7+qBv|}:u '⥶}o;fzkGjP.ЩI/a |8_  'ˀ3j 3["^qBl0}rׁR{ %{+^NVi8?ה=ʮ%<ӽόd8ҽz51ʩ\/Jͤ8!;w޿}_)2 HhΙͼ}]J|HWN2`C}۔d$o͗&&6Bl6+[p٪o'fSTM . ໫ Pb~<:x3 8->8jol6Q|)f EnJ`8xNԻ=`4?JzdS6/<p=[w(m4-nIϷC<9̴5i6bޑ+Zllv Lpu'̃Y}S):n%V]#ZC8fsaoRf, `ܱDy6_Z<Kj>)lJk37-[j-^Wph\ZDcj8F:7yy:l;R&lA ѷheë́4z$lEDi4[,0ۮ(wGO\@ZYgqѰmh:n8S#i;IHmFŽzw"+]܅q@0(XAӨ"|n34, 7Onii][μ4K= hxz?ʲ&K٢)Pw•ɬ="x^UvD,~y-1^Ё 9z L0uT)n,1*)'nTZ-V8l;&yMyD bkkwBA7,~LN`Oa"v.&vTۘ$ayC&xG+xZvk&k{ڷ[eK)d{^D%Z ڧ:.րf 糯$6!oަ-OBju}Kxe Ek eXV8B} 2G)bv[Z(6u= <і@Z%off/n ʂ0G|J6|i/o" "<mb01̇&VJU3l< m ROiD3Ea}-6/CrJy6֒WaAs|R(֘C-3NѦ:g6Цu!|5c8Bu7Ij/}Q25,Tmv}ԅɹ;^n)(vDC^xS"(d?X+p)DTُt|7MT̖Jx9jy#w"-B:D%*`+7MېAe;"BNɢ!u}oy*։Sd5eI*2r`bf%Af5-7Te" S:`da ;f2UAFj캍#Uco)4ɃGEGH-DtqZ~ԴwSCoEV,dW;z3(أ'MLX_S:g?35st @;y,||Ո3XWTkmژpX,ݭԛ-kCڙLA?g R[WJlO!AW*W!W:ŹGWP-aw#QPM` zO D Sɝ xU 3%Z=W|\Q[(E+]e+$OJ , u7J_DEkV%Bzd7lF#H#Z"R%Dge$&a@Ana oȭ̽SB-"%b-Nݩy3N ~>I4[8tPU(isc/{dSԮ)QbPWKѮUI-v/@9n9Sf8*ϡ)Os0}+,{!6Vu(aW.Ç8~g<+68dYTc7q̚>YFlf:\ѷjJPy -!EW O⪨]k@CgΔ6کGʛ9rݨo]tC¡p[/"K,Hjh]( TȓTPwK  tpCvd[16*@8tLg2-;?ZkN[pQR\gyOrmR2L@UAa[W)2K5dtj\{VF.?IloC7uXv/iI; 0&pm/EhcMވ$8FcmEfXAljoN\1oXjpɚ:"M_FQ%@2d:4}ز1Jkw"qzz=։4}݂ŧɏu sxST5ԦI\56&uYcғ'/|˗^>{٫cE}={_g^_͆YRx,O¼|܂P%L&*`Gp0o^Cyp@)|h{ Gpm.X4Q|}Hxġ. ri#dSCyIse8σxpk *^5$`prBIJ$N=5:j'vnPXA:q#J|8= Qұ e [bzPC`G3d"~Jݱ4qG CtBJ |'I G0*tu!>PmWƒr?z؋ɕ=K'=fၱ"{2?,Ƃ:pq+po2uf.RŅ3tN?cQJE)H5:B$'rSq,O9Bą%DgF3H 3f \i0 ݺurIO@챖^",rGxkȜ' A /8Pnͮvz~> ΂NR^ifRdARL+TpFakAm.uh֤lԳ}nF9J_x pvat7g]lˣ\.aGkm*HMCftȭO^̉*YD|h]?#J7D$b YƆmPOĔ|9C# bn+F;FLBUzA1R]Xl#+6=ۣ%r#;93DmpcM}S!j7޽ѽPכ9UEPRa||la俾&OBj5ԋ"jFhX@:|ܕrfgGʛ[\̯Xc [0ʰVÁ6kUUhd J7CU"8[Z*]s. "dj[GV1&.cьBQ!x $vT鋋@%㌵Z\UA0bw~c8FU2w`|Gryʮe@`, 5{HnΟl_o[Eژu *8 A4 f(>aˈUA`O,?MC4T-[`+F8@fJU=D?B+|Ҟ|:Ci/֗vnDi+8R(͠ 5G}\ZlzRm,Vh8֣SQ3`\;7ѺSږi-@DTF9SGNc24$&υ p0J?}E誯"%V# 'f[Yv 6oM]VP+^nb\zp$⃱=JK -2!W H`%B[ra\` ޤ>"0ژ*2Se h5KsS /J=*V $.LEh7=9=a8C6ܴ_#iQ08u)JJ&ۈ-4:װ 7ӌi:Œ3%[V[{̬*.#:DT{鈃 Mb^EzJ{B*B5L*ߕ+0C8UkanUЩjS;F3ېiJS6Լ+վ7t\ *9`SR=۠BDs[vr*ekY]-@iG ZI(%coD$]Չ:YzNIqˊIWQQH[6 umaw]qL!nK_e(7ժ#L 6a-#S`z/*d!h $/0`6Tbǡ Z(TnFjc6Ø%5{EE U!1aBjqk,Z|ĩYPz;qSE$V멠DR\%Ao#hU i9 ƇФ^m߈)z\ni+ btIZ0^6%E9qc^Fkr^ 萫]*јȧ>{Wr⦲܆_ҙ#Hd^ReZvfİf&)NٔSxZO5 [e-9g$R{ܲr-B\gԭS-mh.- ڔ5{{y$3!h ܊C kXW{^ӨiFPIJd'OG φтn]b &j<`kD&\VoQ}dJK/7(uPkTH@ c7Rp_d j9r:gǡ(wiP̥qs96@}gblTAK;sk#7:L8GzejD(mdzn ˍc0L <t=P)ZRƾ9cJǞ ݂)YіbvV lVXW ԧ`z "sqѮh᜕I.'1*[˜ގTЪ3|dt{bm@si, T@M##Ddxk+VHwuվn$lhi ֈ48u;Zyg_-ގ[nkm sy=Z]m=V]OWk=!ߓtt`|Uotk6)b)up4tuWgˬ~o`@ Wx lR_F4<'@w#Ɠyx3.˼mJk̛wme *M-ȿL:꫎?-H˒X'/W~@Fȋ/V3m yfcH^,|4IKDs1t= {ǟWb2x2b'4Җhi4lʔULy T{BDvÂOSn4f-U /o׬m~M([[^.:k;O1-`b{ZVҧɳ c/j˟͐^LI wT{8a(Y/E[Vƒ6eY#Ӕa<|K"4f-@ UV@Q[Hg[͆.n/~o?3Q;U=gO}/~vٜ?|i-/=Ço?~W߼zox4߾66ꇏ_7?}|xQw߽yB=|~鯯mo1mB'oۇ~>?7߼{yo}|E?}xû/_|ۗ|ۋLǿy_Wo>~zN<?<Ͼ~q}>uU7_7_Ow&7ο_iPy{r PyY%eo,tt=]4vVl8Sf ܠqy 7"-\5e4: + ѻ0^r)yzcYo_-ksˮx!|S i *CXr6ڻ;iySxYkip ~o߰Lÿ-xuƨINlf cHkM_t!(r8g;VBoŵѮY1m^ ì '*m6-Paw tg?(S88B-WV1A> S%_$6rp 9m7X7d/-/m"Vaec7Ip˜:pfh^C#whb&)ɻ6a?:3×:Aua\jw~#~X~N~KXThWZ a=XŒٻ݃6Y#\笌vjtSH}]AtA;q2ۛo4hbc#{ocA%I:*OF{^p]X<NyvAʡ}fPIwj^T7/+q6n( B DW/gH }!|,|̷}k_ҷqkM=3| ~B|x|}W=_ߠ04/~0~>g[,OU((x#C$Nƶ>v8\ qP/ar0]}=q"gqЬ]Gr>8TafUSUcnFyC@gxeI)!u,`,@τjp9f vt|֭{<8P^9˽669*β O' +g A3?L <,66ʶgpg19dNR.}oGa$X 5%(xZޢ Ic(Cۋƛ7xN(dyg帺 z"*4}i>Km"8>{8؅$H|nCJڪ1mbENPôn}CyzԸz'a6}3)=K?DI;,h<XMm3p-oX$g78/p^Gz^Y!1-P:[Кf*# :BU+;BHp~A$FYTuywNxBD,p΋ 2 q{{ |춎@f`C m32ɴ|_ҶB_gej4r &U8s4g~$E9W}C>(m4n;g# sfYrB+:4?,WIJu_'9;'ŧ O>ݠ~f3`LxG,xut Tci{i7P4]=/>oy>ӥ+)kqqBa *̔nvuS1JՑ+)6Jcm-ثӸnH*f"!(&B Ipp5;531do'-$Kf8ۍcMv6ۍ?޾{CEH~|o~(UёFGˆDO?< ÿ=}K~5 |[zҽ(9}$]9y|9UGic6 S';8c7Q.G=t,QI=&[աхoVja7ċun0F5< žknS)U]2|yj[Fg(Z:[3[,}zۍjL%*B$y06HG"_BpXWit #E1KrEpծU;M!lDmuWѩ[f]rԇRrssaSvJ*@ʞ v1ˑ:HtvldT+欲Q(dـs7Ny{ wSe[Z~ՂEc@>9s}n徬OI$N|9z3| o^0YL۝iy%w;ojAo[DKv5НWMyG9XVWCdz3{ۏmB7Ӵ+nA[)n]㔘i)yW(2&{ K]BީJUVac05)qB*H1"f 5e$]=a7>Xr"z ys "׀; XGjX`z S"nTRsކgȥ j#_Vԃg{ ^˥oe's vfVCt)E, #XW YB{٨ӑnXbRo=3K٠<)i;sޣ-KSҬ[{1 c2_P\ϚVN>4xg4ɖJ&5LF*!;1ԈC,M7V܁ zm#~tS>SKs[~|o"п׿ya4HLi 1^˟_/|aT O[6H7k޿o??^oMy՗k>iꁀsvLYTcGmaFȷoYsϾԪJ9q[׀~{vKնRY5?+. P%{4^0v'8,GlU8۴vgz&%qlVP9y'NzwՁ1r۪݊,Â#SZ֒pE]Gf=ZO0,oXZ $#/eԅ;PP1kNjB)rд3ׂN, :%x#5B _u!_ō_tS|{=OooZpKVw0gwۧ)ktJP2nxIcY5L3'tfk{nSu=!ozuJʘ9LG=~Ruj&BϹ[wQt+\oxy ygc+Jr_l-ۗA-zWs-ĔqjG$&0Y焃3"Gʀ czp4._h5'fųf$i {ieaӵ^ ;nmYbTMJR Š;_zܮ'#.:??{r v2NIEu:E{S32D讕æ>[ÝN%cYo1SC+Yuߤ6)K,J b'W&J "5ڻغ@ov yc(˽w#cٙaW覉#i[=to)=V`I_ vN*]=hUZۣ>kw'SQnL/m \3O[k46oUThߋDu#Eq;wd6arļrŐ(7Ii_0R БӔLavyÆ+v^ZUݹu,Q5p4efݙ?=󢱽n\gevSқ:>c/mn[-5vNj 琺 {r"}ݪՕ]YIw'&ȨEDUS0> {JEvJShMk}Ǽm,g͉Ta%p0)(e>4CDeA㡯7H.oĊ/OdںBPeBUЀ?Iz` ܶMt{0@_ f嵹2mQ_..P-'b=$Xo1_ȂuQ@zy¥CƀVSx w N矻l_o1乘+>d}áE**!sr2b5i3y$$F=|^e-xM#8pOEi@0_f^ѣH/%'8&lxMl [l/va,] nkb}#h1OME)[ڗJ^y1ȕը$NaG . ty74V"E hLnl*%mᓣ0\ UVO%j Y&/oF&9މ"W ܤN EL4>r9 5I&ODѐ$%EuDYJS%GELS.86@Ei=üzkt"E>ERaξ"-d3UJ DdJ1lJ6/CTH?G]C3l[sP2B 눵w9嫱&/m߅uqLܪn;VD}R.$ _&;Wߗ^&Y- _ 645a|cap;~Nò-9 )v~<"sC%Fq_{x88s x1-8[ub!]%}|}3z $^=Y=7~ n&5ybֆVp > 7&lG벿6jW Ӡea'Ҵ $cIz˦ :7-$0̌sE+-nc[O8gUX.FՃXLѮ*1 de|=dET=JU0y-a@HDtA9a- պ(-P3ڼ TWv%8°h!s"ΞRҮr-cT͢TcK9+1Z8@P* YUBJVʥ$Uhr0UKxR$n[X|jJj_ԕ2K$)c텗FRLr62W\4q~{Ӭ_NasK0AVX1jք CI&n%cɻ{lKZ8Yg^[⍪5eal'\CyShC*B1!8~SZ%,kJ6յ(>֘Vw׊7%6^ 8bw->J*n4MDCt-%*BA7 gpYnԃhZ&lq (**Y i neP \ס؇!$(hJ84^}!- C '&eK6)(ޮ ᒈr-9&e]gS fay]2I L M'Ɔh`8ay5%yZG -GouE9#c1aKIDE gTB#8j>K0MZ-pE^rC Y[熪C&meVjh[߶6X!=b&?[]W&)QXtJĥ/9oPbk-JSIKA!>p_V~cMZ@QT* ι7L|%Y"JݧѬMAwfQ3$RѐbsZr _Xg b9?M貢^K$A|(\$a9m(P0Uf#MGW/ckQ(YN (INXry+UK`˄Xe՟WL]نm$mFM*R7_HKj@Lճ+18e(컐1$ yٺ:m/9%d}02d֤@禦-P71FXpBk+{@k7Ӹ:Q؋ ЖTz.:7hP)WJsRSrg: δEE>@AGϷǣ纬|"CTS=zNȑUҽSL8ruk-3~(ɤ4?0S(2lƺO|pQ"D ͑`8f+V6D >Whs7%h =0tu 2ʚBB躃з7sgPֽ:Q!aC֤Ewz>ȣ!t2u0 (km#k h5 /:j6{5C:1nC~&k&BgفZvƽcʬk@wAۖB8|\Xb[mw 5a' v|RX <3_,FJ1AwڪܷPs/ $W<9d(A4j`Pv>v&1օeJ*#+(r K/*\\|(9F4GkIz5ed\:BM"+h%ۏjY iX,7xyX;)-d++qsѝ+c ^$9]imثsE}oRɍVMopL=+ٍή)[j*T,ע8[Fufҍ#F~7:2cDmbJ:+^XNȢrڸ]*T#}򆝕/*'5ȯQS% ]N O<"#aQ7V`~*P10?@Jdl-8FCG 9P(AuZh&]R"}\TG@e؛uPu/U…҇M7pTLm :?`nG6dBecL=X7t5]5C"Tʼnn$0*HEnDN> *'JnhYhKWYij$\);;e l輂-&W_ S7]U85+W2FbCyP<j+3]W#َ3xy/`-Pݢ%>T_Q䜲>X<0ϻ~97kea@'CѓkMk:F7Y`O$aHo癏zO,WOwʚ2K{?29"4/j<^).n,KyʮtN껏 @ 3sAkz1&a3p+1qZUϲxSf3du0 {U;b)k0":UKXKe.*cW߂J@NXP*;iXDӶLhcAt罕8'زd4gX6:åiA["3_n6S FUV5IShu/=Q]S\QXbƌ[N[ac ? f375qXC5IfNᭅ*i]B#W mC)D2*]GeKFPMlT=A!߂%-RC8¾ v+jh$sc]%K5wy)V jBEs-\7 ̩c¹>۞{|(K򔩴&V`rK5IC/ aYTdCFK~2~:3 6KUHÒ9SVVf)NY?SM7V#1E9X*.{O i`jι*|QFm%ss>gJ:K:/?tĮƢuےpP}%K! /A0t=F]W,<-רx3B#o"jT~uz'ҀAkeI :vhZ ~d~GdkrEEY :ȴiˢutZsЩ[PN /UcAA[r. jkPfVe_z_ vBֽ@zp~M[]85!g+ 4ĭM8' (ؤ)X"9s3nTV@}o*IZedQ0%%zU EZl2]:}ĺ.,tLZ!twԍ#ִD] BBukVsZ|dMoU8p0AzaqceUIY-u]YޭdR^tJAz\0 yZt|I}gI&v=7]>{ً=7=s/_z =o/)@ NV7ylD=T\ij|F[X ӜC@Ko};=hs- S| 硠26JHi)+ŵ ]Qz<@떪qLI b 8PUIr# @:ՕɲHlcY,ht[r\Mנڝ@%rGr)CO^hm@WfښNk㯩"ut֥$|à ZƱ5hE_' @ +ٕw:j8%a³H܉,H ]?䣠w5]1jjn r䷊*Ex 9m.ɆK?Q+; Azֶ5/=`V\A+A}6P{M@2G}C:qoRk5j &m7+=cQzz;٫켺gRd{PD]J}Ryu=0fWi88qx -oܷŕܷŽ ;anL;9j+0: VS֨x9<{rT8O8KoTk o炳:=`UWv;ik6=*NE z;/\bPwZ5]-zNi5& _Tru^qLs}u{G8ٺ]FzN&C0mwHsBCe1}iGg0گsײ%.ؒf}ڍdZ:?fDYoUV·p"c'j_zx5/ƻ;s՘Uk[&^~.1gGMWwW+8GWziFo۩(3#˯x~gR,ϻY_oXu]. 4U#KȄf<b!44$hKi}X ,=O{[9(/^o.!9cW@E1h2I:uJg/]p) 3tv,:a'/I(U6M͹QPT|0 :4`tVmR5J9jdG`n1"qU2ãpL~#'PEب|y"67 Px@Tf:I\u09ꥎDp x iAx ףW慛^̟Pp'"!6.=ęd~]a?ŶGҶr5ǓI'4)W)o].xGżLE~ha%_EW/t^MifFDDUvKk GS@_ev0`HNk @v5u%')(.)mzXg@lJyi v:ʝ"_-4:ВO 4-[ &7$DBb-3A\:$+Ypb,S;@B rHqdl0)1]/l 'q&l|vq&уo=*ţonţ?_z՛?^<쉏/:{sg޽zwp㷿~\y?./No>V_ca}ݓ^~/?~ͫ"߼ Ƿo^?m~ͥ ?{yރ}_//?>?݇/{>^}MϮ<ӿ^_?:׿}쁦A5ӧfJt ZzU47tEMGlh.吢iP,qh &;zI-\뀓ICyt,`3뒛*db{!0 JSHRfR^w^@֔7c2MZ.u /e+)uɘ7uw|JBXme( n^Ȍ;WPgqS5ж)ά![ɛ(%>@Ɓj\32Ȱ#FJ6t ޜ[c \n,²mu^ E^$"ѩ:E㊯ڢ4$&~T. Ht,W*T%cqRK_u"qh#(0~tF[NG[n<'߷Eh'4;]62E>IqִK} ֢ţC{h7l}A1Qe !5kTZA@zc<3}34|MŀH*SjEOɃtRubh/8g|ё9t"=[PA섭@#MWyb/IWinͮm_WܜWȈz L ȋH}т vthD4ȲBJ */JlbnG5%k pD &z`$$C'fFT Z!mLNJ(5j(|V _qSL;2h~Rqc"fc띳p#лQwj$EDn\ЮJk ^ z4c2,.[6%{VBDwBCD]S T>l`·ɂ86ե=. ur8gL @B,0}L'2$T|p"yDm# CTyƸa.J #MiI[EmO&s4$7riRV0ڪ#Z&_] W$l䦃.!]ힿ9*WQ.Q jsϣ 5̷X\g|!]t(MlQxt$ODJRhabqS HZˎRQ{a)WTHFydYfk cȖNZj%EvOˠH{FBJtta,GϷl#i$y*l\o͈ r@3j)eYJ]I9Rٻڤm%ڜhf?m= (5ϊWG:]d 67="ϝTJT9"C'8MQTv`s{`T73eβ )] fǝJ6iClmvњ`%tԒ( Ycf@=g֔χ{4?)=K,MZ8hvr٩bFs^Lad{\9#ţcVBY7 2B(jkQ_7G 5N:j>>krkX3Jt* Ik6e5;af{z*ܖ`1Gc>C>DM}s1ڏ4]?xqѨUdE1No4 JG| CJG$TAY?$.ei>jxU .t@O@d6مnڧ0Ngsf[||:l|Ɩ{CdY>*1VK*B#p[Qp 1/k_9uیSt0jo&so(Aцmd\AvUK_s QFXSeSX"ş4)34{l#tG)L^YdD>^f4n"2`/^hV d83$j%uN,]R]ϒz W_q d83yga_؝ R" 5sӺt0Q8hd0"zY^; |^}|a%@LT~}36CF.x$^n0">6TaY7nRg”,i#d`$(-.:φhГvKMj4>̐G[H& #4vcy`Qf1搕x. H2`9~+WBVsnA8<) ={6ᰎs5b=蹡`yx2@82kp6n\r{\_WO5vW| ]j֋QC)?gcVUttf9ctp[?R*m:8,d=ĒBzy&s\ @܎q]K8 ` H`()jFq+DMqmTWa3t 0Sw}v7ɹC(jŤ 2Xe1$d<79E SQfu=YThYy(t$E["r}d+30RZ4=8^$5^[Wl喇֐g{ q 7k>Q}b!S>+6RPLF|δP4*S ͂i4QNHA3Reo \cP{M4hťKè BzYɢ>(ޚRzȝ)j&=q#`ᾄ˰G 'Lh똙:xc0 0g]XXd w O"z[:alJÉ6Qm)9ᦵab^NP:a׃NaU[*s .A?/oYFɸONVjksL .UK zCpzJT]neCة;lISB<HjV$[yweј6_y\}F!:Ww)7Kb@`ϳ;Ke[c9Y,^G_DA$J%j 2 ~:!~9QaWUj-, TW5R-1t(iQ=w%EdeT`_%c2K;hkLxd*IABY4D_gs6,RlWrR*`a\LĊCK)Tv5D8v%1!VZMAD}zGEC}ccDX4ncp0|;p b_Y-V]$DW 0dP@`cU S[);˟Fr2J^9mz# 'Xr^DQ6Lh)lM~cA\j."W|pqbG|T|2ٚRoZ0⵵qE1Bc 8 i>葒ARb>ÝT낉P+7T6:&| I R9ؓxi+e{SwmԢ$UB}g CF0H|YMeR^.[)\GǒIG0tML'&r2si~sTPuLh%v7B@0чM$RϋνP8nkX{U용6o)D[DY q#3xC.Y)usN{BI9ʈJR蕙~N\0W@DgG`X"΢ۓ >]ZWS")5eú$+YXGL?L"~-4rdY;+lo'uI{j{jzuz<ˊ.r۩$;Fh*ό_F'ːS=&l[Qje' Oմ#f^fƚ6qI|RjNsc_}6*>cEO^6S uɐwt`򭒥1'9}l c1EY'ї4Am镾_0]R[*(EM5~6a% eM|UK5йW1EaoUmPj%f)"wm?@aк_,F {7sf -s ,\wy23#rYܠLb|m[E~E7ˤ?'%h⭝.øLEFz_w4XAs]+z,,7?];C4=y9$W0Z~P6T.V-#ߺFo7+L8: wX u k4׾-;LH9В`̓I@1!G<5`-.\ Gڀ*eH-E62a{&Em RBb)^w3yK!L%Уz/֌11xN XIeII L . %">xASRZ"/=W߽ho{'/ =ڄϿRw-E^>Ҿ|':9(_}O|MCmsj `wD!jh(<"lrʮ'1?})3ZC;yY SU ˤZ]WClwK=0@x/$nJy6+r``mOmKm<L͓H?,v)/5$o,cB;UiG͞=M8a\]JVi&"AQm[V8dzHiZՏHKUX()J Ӥ1T٠]"\t`Ch:[~'ETYa4a,rIr%ڲ_A'j`p=;d=.{`Oy 0wګŨg1Ѩ()2)C+$'9c*^y(Cl!)ؠD&.x$n&ذWV#,{a 'M{E)pR,bN;6zZf)o(eh[!{ɽ0YqXY(B,]qyVQ̓uW G'^#o0&wfaa^v/0p[tzHjqo͡"ɮ hneco4T| @E}qF› K&PޱaѤ"zX6#F.N*P7x[=1X͗DlfAOf@~jroͷrԝ츘XV%PzӡБ֋u?vȠsެz 6krƨacu (NIb&4cAy+疯94xm0muۋi*#dM ̬kz H (ؤy5We$]B5&KWmW#격=yߖ$Gm&gk !a8ls-ZxZ/K+P[Howp,@[Cf¯ٹdrb~H@CdY)fzgwX*P})J=rmV4~CڒUo\+-5Ac1x6׍[N\1[GaSH[U]4mI 2 j-v͇ɦ>,ѴH1"[$ k'&¹{ w~Ԫ"{}wsCVC\Vՠ*))29&SMI`joH (Ny Xbn}Қ&_!3ɭ$75RK CgxJ*tC&{r$(I?P'Nq+s']}V3_cy{xKDS*ch 8\iUej(WQ\iJ ;aL2N*߻ f4 سv W7ӳazggՋ3)u})w8)yrPV\S3Tm͐JӜ1th+JyRaMj/"bWlҘ`VÐw=@>}<`K=yB<^~~Y]n}wc]gߝ\kOo>wZ %;>//ǫ_oA +`&x#H2Skz.0ŏ@ gc/YZ7|ny9aeIɦ( #(~K_n8=;va-BK h.-b$1IOTk,!3B2S;r-9ksqSlD#.T>$hnfB䛞Ml[f4s񷅻֊2Bvu-3=d[dw{IAFD]J6rV|AU2m6RPvio ͝af !]47$,݈2;v9@{!6Gو겇sW^B#N;g+2 X1xVZQ4(`Q%댒ך1i{xD:e}v91$Gtg(2ڴQuqYjzSOa%;,wU6U:n )֭'\ЂS1g(]X[o[۝r#ZqUTY'fɿ(~Bn%ݦL9!]NԺAѐ:/k$ s:H UuI$WRDcf/j >mQl yD VO/um缺yͿIf ŹhΖط}FOrw(rd_6rSV;!%%kWxVS=[-,*pRi[r~yqNֿ̬u'a"pc SXBGw=BwԹq4yx2ѳt`rҿAwkY1}Uk]Iw&,=*bP_mJ_dj.r(5vT`.5%kRNz;(9rַ{u.ȌcFU?ZZH-`0:y}Oœv`]kYS4p0=d0 Ǖ%-K#Vf|X<dD RBbq΄݌UZ2Vzfh8+7xP(mMh9prJGP3T,[A[Vև[bl:Ҟ@~8J0pF0 `Bx8C1+ A=DsԽ lu6@F:b"v#Hoۢk#?Wi> >-<-wFLG|6Z,x -r'q ˰#0>G|݀)S}n Êf@3qV̀ giP=709~ b":ƈ۷`:W}0>`|u4 . 9Qf`pvn(J63)=aD\+`scDR/ d/8? {&w=o06rN6j⫛mf.Ҡ_.yG!ﯷ\wAb]! bgݖ}DW!u(Vڷ-FYqNf&&yy=31;QPz̀0-"yE[9Y$*:juB# ؟B7paW$159endA]ѹ{;NȞ?Sm}|ǴQ-sd`Ux"!2؍5@DeQdn_bAa3ۗC mm}ƛېi gV2scX3>o- '`,=oyȒTpmQ5;lˆEWjdpr.Z󠁘K-ec X+ v;odκD(cM E~bbYa}F[< Bኲ<$OtwUpnG׆0M̬ف:|`~kh"1Z_0 |ջQ7i$HW NMpЍ $mON Gc;m5?4~aM9]ӆRXCov<01,xd!ԥ<5omnJ*njѭ>L A ҄($h854}ᮨ_ S̰ I+6w۩緫nj o'kt 0>⸩FshWj'l_Q<V^|Jތ_(q`P+×ς󚚄*-h58?qnׅ#P-N=L]>QâX93٥%#kz8y|T# 9e<=GAAa_-VӼ¶K%qqNM 2!2d "f϶ SER.e9t{lVe*%H9|NO8WlbNtZi(7Nj4ڗʎM3i~7;*c'-cPt[sG$,ωt8?4%ts9۔:9%mGۦ ښyNl{V~s^gDu0a[3oBC ][oF~ӆh3xw 2r@?~\MɢحIVȺws zT<_ޘ>2?sڿ"}u/m/~cL`Ջ/dm55&} B%<@h}Q?p)dիt4 OO e@F vZH) C钐>Y>#eI׫z(=y/ \'LB=ҪO-5~3ePe(umWxßeawO?I eRk&7НƥIu%+VI>| L'/uAwdg#)d^PD;]aFD>@ǡh+X!ЪJ%m t_/-*/aiȑ4!-Ϡxx‚.EE?e'Qt"4 U Tg MprpBfIAN,OP6vɃp(lo{01*a mv.uUF;З:l|1W:67$`dIg 5?.ET6(N +:!a LCѰN1*Khpu2vߌР-MQw5Zx3M4ChkGc  !UU+$y?Y۝L1L!:;Sֹ(1 YobTha: %)% MWh*~4i!ЧaеK$)ME-fp60aF125a(w zC1ڤuP~Tup*]^۫wg:);{}<Nj>xL ŷϒIK?~7p~?~|ͫ?Qyե|y]>)_?_oRouʻ_]|5/Һ~K#=yOyۿxuss~w_zoiW>]|էWoxyx.u}>/o~߷^^O>᫿xL|{&ygt/?ߤMՋ??WWߤMǬ4P3[oMUwyh%IU-SГD \ f j\BiGoB\a['skt^J4|Žc4 w$#MOHjM+;n6?U{$pa2U&tV,j` <",5~%h(z ȅp^2hb@LH/A,5Fy0po B32y4L+2:!ND:qkgFDI.ZRcOWm]r(ȷR܈ IE !'5+D1yC j$EmA7úJ6S՚ZnS{?=m0pE E ~Nz!Py,hwf7}t?M'͜jB^AlI#BkhXKfrѯ<N MCpj~. Y%w} ?Cg-UlQȘI t5i%f`4=`$M@tR!X6&IZ29c6lIH|c fZG b6TB J_s$2GL"حrሸ!j"5Nv d9Zq[gk40j,ֈ{jBЖlǷ@7A#` |җdxZ *ܧGKJ /.ZSo x ؀ ?5 4"\#h'M(}(JrM)qۚ/Q&M.ThR{;oE:DQJΡϺ,:Qš$O-[YS%(rviiv#Z1."vvFڭV&5Z6@bRܰ?Yut2F,Z#fa@*k.>jUc+@gCsb8L,ʔcܤ4HK bH2{r?i7̣bө4#?&בXG"ّ~;A]R1H;gEϰЇ&)X`TEiTW Yx=eрl  MHمUYߔAcpҗirѢw`Λg)>A4$}[~B4F(M4Ɖ *J:NFpОsPD-$*a]-& / $h:ˆ$XFD7y,U+T=`+@mh3F.gb [#t cwB^'ϖ#.U y(+sđmh2 }۬|syƆA< 1=t, :B)rhG1`BLcI)_B}@Մ]0vḵC`͹e 6;$UA/f= ^gfGͫgD>E DSǜ5DNnXsLQ'$nTginU%c!5_>s4K[Li4ٜ@UB:ϰj:@HvZTUV&'a (xBF0 t?촀1*ʓe&L j 4+dfQ`g9 )dXqB&P&\ Ld@Ӵ1b 0 FB( װ#Wt0NUI0ed]4b.$8LL \%i%$b>%Z)xD%= %(Di#2Zr;FUbnuʪFZ0=z]|Ƥ$%ɂ[:a2T(%-=˜ a]6] r.֘d P*vWdF#ؗ<@Lxǽ UIeÙ]z;qumd+ [=M@F8u#J#t] y@*N $4/$tb" DT:T`T!p 5~\W 5ΐfϫF{8IFXY\Z >&\ᨋb=.qq"g/R)C괂 !}y ] =Lj4ЇJu)[!kF|qq%]@e}sH_$wrرmAXz= qz[ OQ.,橚v^ʑ4^y>"ȩeFzB2?[fqijJ°2s[T0rmY%5DZTX\n z^tD71+[T+ >Λ2W=U2^L9M٘pJ(p 0j/Fc@Rk5PY *0+ϒS1J? b`*mM2XAӱ @IXj0)k93=Ʌv* -ߔDHoդE9lHM, -v ho1]i[4;VhR+MS0?ӆ$QLS u.Kⲓ +EO~opYÐE_;bE߂ۺ]^~23\l>,vjFSRl0 4fKO !rP˩@| -&EBjǶi}]Ks:Ni" y͓b"vŤ̡"#k,cszj% EHb;'3Mer^0]/T[sgf'\>+>,]4fV\F'0Ԩp2q %5˹GlC6w fs.UKlnxla(J_2z,UyS\3 ڭG庇HJ&U0 k,)VHٽ\qr[-:A|~L.׈y.ׯrv.w/t\nrr8>f.F\.{,8"2q:6kW-'HŸ&R[Bq[XwhW6`בRUk:O{W&H,3Y|B+YpKEjp: ׍(ܹbՒ9M6[ p8ApYV6mBۡ"V[J#ʳŐ +o|gߪ]wdtRrvW݁Jr~t'&pp;m"p MmJWa-F"p-npLB`jQPŸy׭!pP{<>s ^E匌-B#pS|`yíHr$L!=: kI[]fFq-q-qmcиDB)qAp5?6c@Yf[i]~{ZmliVb qkuE%XZ7y'č  HϙQ:3:5hT/[=*8#OJ9 dL>0 u_~%[\]pD#WQ0rn89 V=0ȃ2U{05ଭG>HUD(-;MEWh_1GhоǓ-=DZwcy'H#H 2+k&yQ&=N'w+˻]fJKw5װ۵Y^sw~֗ ۴!a5>Z׮u[`(~cLΠs]8 ֝pXjP %98$],u:iڿ(. +zOv"կ ם I N>އ뮨=,c-+y]{d^w[ۼPM7S(GX+w{+xyW-=W/KC$zsD'o9 y$yG;ED<Ѿ; ?~q2yh_DV{w݈93۫y'6 #ڷ;ﳞxK`u}ٔE޷@ x_$it'9PI>z^7f61}Ѿn=7 kjDUsoh}eǒ]xߐ1? f?1G5Mzo8]@af%~c_E%k+=F"LA^ww Ǿͼoәv6MB>Fx}o御n/Ix[vg'øueUbVδ}k_C{;>nY**j!ԞSwyDHTR.3Vz iku~c\񽅩mIQ)[e#;ε)0Yj1朁?1*.ݯ#FrKoVb}%kN{{C)XaRVy&A&L 9^ٺjf}{ɣE:Q j?%+n# |`}1;qդ0fv7m̯gwt¢6.q,!{݅]CοC-=k(*_bQ!.62Ahjk?{/圥u-;f6ַ͌s= =6xmiuژ*sIp%RD ߦ #R8,v),m J7h(Poy;>)D،SwNqn<BC)]Yu~fd k_F%KtHԍM&V,Yj3Ub%QL^鮮:wGӹ#Xm:ƣ=c:x>C>?uLtm>jW.!ώ|zPAg/ztw]:C:1o#]wgG),ˋ}ꦟ;yU1)(Xutecʉu6gl9/u8rQ8Z[4#31ernZ ׆r~-,ʔU\MJ6{j~j1˭yHze\i8h %\YP]ji.;O'zq%g2Q˝͓9؄fV [aBO(Ce޸.l]Ȯpn9xLuYGYWvp,prН!8") xH2­ ԟSO"!Aa*:4+$[+ ހ2jJJ-u ] <,;!a,8xC GwɃ^߂ qNx^a.G!r ʡ:]wqgTlvC1,]/]2\[92nީUoi4B߇An.neQH8gb]4*!KrW6g8J,s.CG mpYHuĹ`!׭EҾ2fwΞzU Wc,olrڌ9U]ll&{ ``]:Ah{B^QYc\.>x̉dj(ORW{Pa\IZ,pekn;WnjXkgFWK«ZE7';/gC(R?i;t3x)#B:Z#^ǿ}/_{0nH'^?㏏<2/|*ex/7>]}ջ7_~﮿?|g?\u&~|+gtw^⓯^\}ӗջO8>O.Mǯ?~ó?>__&{8:wh5Xt4Agu+>)G!tS5hAÌ1^ª=xLa!cJH(ߔis ldp'Zxaf4T# qmFzr߸)`. /b.0#s.] 'pC% >`W] (q'l.b4``@欈`\P͜.c,|رbd?<9Sџ. KXr:6K Ern Xr,.KN8Òi \ K;F"yp,y?T֍+Hn+Dq ~d\DZMUX`@]Kk3k]W&@ƬҚC1d=ÐOC"F"R>闭_ wסS3nV0e=ǔ}`ʦ=aS=,$).g9$H2)Zy{~39Ę cN3ay8 sSi݀, a0W79To0,sJE\Gpe>`J@ןd'3]ձu0Z37mv $HH<r`fl/@[HfFroHs꼋!ȄKd™'Qx[cr=B&,O]$ , 9n|Ujng/0%$㖇SD_ v~t\;Rd Mh2Гj%.~q!|]Hv2*i{y?q&B!3=٣aM7O8tns|慧"&rҵ ;$J 4bl wԁebD YHaGa@}E/!\+,t,NJ,1l+jFpɭuWd`8`B=`6)J{嶋xm-+HɎ0{]`SPf)jr ;smx/}MPhS*tl}ݯ/ w@+?}xo~t}OoE͘'?})^kgS豋w/_PӿoO?wޖ7}+ϧ|/ezͻ=C޸OkVmqᗫ^ןէ7_x_dz_/o_iy߷پѰ.r'B)lz7NW3$L]^RAؙvp2^47527A?E^[obt։4NFJh)?̡"(Fy~_`}C馎~V^\ߝ27HQdۨ3v=,-޸?ڒ 0*ۚzs D6xtj{h@3 O+ ͩ">ZWpy'Dtx1١3ݛV*trHA~/Uq}=ZJ&2-ʟEbk龛̈s|`0f$A뎌 c(}۽鄉&[N/+ϚQ,)N=,uh=&F4(ZN2IΈ4\L7U^ kGu =] -aln_ ƥ ?!P?HNX tVE%܎8In-YX"012k1LEaK7(TaEv<K"Ah98[vk t^jr#A`AbG呂:= x- )(a!y}=qEpqECiz4_irL.di* 2^si/xYUJo~;,`9)7 u?>*j6A7VwA^f5z0@R)VM X""eՠ]H~  fT \z^I݊߅;t'^-^B aslH+AOI)K(Q Pdf="cC0HSb.r0H&5Z2Pb5ٸev{H j2TߪA^Ds$=eax9}눀 A9f()25h#)BQ{X lCm+iF3 fmtdŦ$e'<$ {̣xGpOEa3i)OH2o<%6n8YZ%=ܷ=L:8 1xIpf ;-3x C9F -S+FA 3HeT܅^II3tQ.W?fN֣@a F}{ b\d5fE[XSͧ(E,;E{!NK"I"vf:A{Kn$1!yx_)= 6ZxmIm fkFD*Oq{5,Kpn RxQ/La/ JHP SJO7 3;V 1HT=aT)aQˆF{nvr䲽gX*{RF 70&Oj3g:Lve΂S"^ 3IBg PQ3 ۺFc5H+!臌q,5lX+j2KF,ʜ; Z4ݱ&~a0;:PJ2'֎ Ij+jߢ4IiFiʅE`N^]"QFBm SojuXeQPbҎOǨQl5:ܺs7Ae&m5YS''qC^82b~/MQk4 9+pxS~c8L&q%m:˲(9K=d-P."%5P5],YaC=ds1;p=grh8TPK ?~Aj);tC XC0mf{>yPp#I"kv"ѧ&(YIw l9cz1 "]PDé],5s=^0e\:0"ea}lUiqHәYt7}/{M#|(rl3XLJ8A<|br1zǒ;6[{A J~[7*wTGi?IRsp%o숰/ՠ-nu!ꂴnvWG\0:7sTI9#q#N29bKT|1 FSfѹ" vbHҰWᄃ=a_ܔ-kM4JHN>'&DeyB"BBc% b-xMn"AޙWk(M#v47<:7'& 6yJW 'cC&]MܼL>yB )b EUEuխՕ 8j$ANѦ0n-k=lU£@ύ.ٶݛEAMCVb/3mpMUHIU*M&ro`(ؘ,DHX!2^w:Pa;&W+SG W:\AZ _} Iؔ)(]L'@5;|# f}|H4w"€GŤϓ]nE3hD%E{Om Mwњnꮾ>.=}@mkô^f|k='oaq4:cr]fwpUtnȡmhFNOW l)߅̄0WOpl do:V)6ٔvE۬8W[bfnؖJcopTmk鱮#bWir9+$Z*W/IXq&V0WH;l7дK̰^NQs¶wVb EB**zWR:aJm;#ƣ|8Efo'n櫴ە\E{rI<7*l8Tb:҂mS[ak&mKs-=v60ɐB1QZ(^h\ . *k g4k Xۆ=LbCͶGDL?يZbeX: <ޮcI?Eg!)4ʦ<Xͦ?}\oȑR"RlG& RLgj ]g>\.W1DKEd]4J'=[阚[`2Fo$vѩem>uZDӚV$iv$xk9uƝ%m∏O8s^sT05KEK mG*Md"pގL> =];ۄuV'59^CsNk !,4LE#^+eFgΎy5hhŒ PblQv; 0e2fa8YlpnxNw `IoZY[w2S̞y(}>>~D( f&j1'Ţf84(a`kܤSE QLBRtv'R&CI(>[55@0IUTSHdǡT 0m-KM[ 2_~93Ht )Y4&Խ<.KSCVĞ\rVM͒a]Q6R%E Н*D^.zun3Z8Tb8!<@,Z`wƐsԦhyqҫׯOfZ9$lnfc~X;mG]Tnƭxp!n5U:K \iq z O@0CdڳJ7$i-n(^WƐQEuNcM鳖4e)!&ͧr"^zAٝ9xdBW^"o7þ+Yp!\Rl%򼇖!e}d9SJ8^qTAQB__ BC0}ێǑ3?O{1$8Ʋ-sg M.c@fD%2*+"wG"٧*oqZuUY,\/]OSuhs]ko/iƛ6xuU1 ^K.jQkᚆ/WO7e#? ߤEG4^ \ 98H WDӇӖӤu'%4'ui/8jPHo-Tis5[bk ZR7)%hW HE&`:K$ɡmΠ#Q~Ve.h&".,Wni*UzDjzI͆!QO o2uLQnBe7hX92 \߮WUj -ƒm9'Cy Q8uV1_9[_ӛs] " ?T .)#CNK؁FvBup]BT"A8 Q8\jp|AihAFPXi2BNF VIZثhxf&!@t> #E^3G5rIr|CR>M+ ouDd"E~,TxK .D_*?W<11m˓Onҿ_<,n~N]OO?}www|Ûd^wcz8>}|}w^֏ꯟݯio.^<|xO7ҏ֯Oro0_~yz ?-w鹻K>׿}?^ ~s-?;>~}o~_|!1ß??ns????_ßbFd%E4`ЈB PsGhAh\V)Uu!F&Ii5bt-PvR OPӠHCіG\kh+Yl _y_TcYrxDC4~h[^M 2mA}&9bѥ) A([!+P V@TS0]u }u? /ZW`˝df*bA*&eRt>vB ƊKE,`LdPLڃ[wd4ޞEM\@F-pY#ɓ)Cΐ{^uzm:C#Z5A32NhB&|^^e@1@JE$UFcL6RyPI aUheV{ؐ6"D4 43iD膤tHYYQu]cypA:qAF0GCJʬ ǃRȃ&ٰ9 lHᒖ*#+dzdU ՈӑNs`4m?>[2LDH0dUH+ Ub\fW-@4xR~~ZC:B]F2cp׀|Ӿ>vxX|=EC2xUmA$:UR 1BUqBN.Q+<%WVH_d:SLQ۲\dԬƠYĭ-8~Kd$hp|Uݳd6OD97[oʤ)))& P6pnrH1_>#hR藮": \ Vy۞yJ랅U5Kf7ڞSѩVU̐{' g|nkJ,`ToCM.$5 V]_H$b)VۇFB`PsFL&9Lw9 6-*(ɔg<=%YΖLpdՉLn)N!9{YX'v9ІH4AKC Z_DW vSZq:!z`q-jM.]p874ԨT%x7e ~ٿ3;K":"~qq#%o9i\`7a2-Ew)|qLkgh~ b7@x0쮊c>ń沘oJ`R7ײL~;8B{ߗ4=n\?N~<2r8=ǵ}H1砱k5ٮg8WkgQ9ZPs ƅ yY<0#;W87827wh@u+GRau@AHHCYA'tJK|x,B;7.H|&Mq68Lh6la{^0(,;7i| >~57sv2m]b kP.h = 3{L sPHT|[3֍ pH!, -z#!S3ن"zx|.n<]80=0j߿E~zمfa _c1m>z,W`05{rUfjױa-^9絎C)\A) ('b㼡f%p.t23I/p& /KÂJBNo!4}G^v%5J?nQ

 PJFy׆=cLsϟ򩢿.lkaVl3-tC~M&1j&Gc&d4@:R-쳨Ũ7yZ-#F9.Kc <砢!4RZЬEVG3Qt)|ti z OKM#0@Sě|Pr+vܚצ ơL'+G0 OXEF/OUosg1>*J|8,UlD%xh(i t49+\ (ȧ',a z@ՒS htk(h5b:at^J^lGi%RViwKSrw2#^s #xiܿ4 ~"j֜8Q1Jt BgpYSq6kɊwǁF#'s"go2i)$0iFYf9&ee^zOH+N^(tE ^*>cK$ oQu[YGO Ay #xbgwT-*BxE{E% = v`)D"ҒnN4N!R$drXT5D2)dQv("}Q6?`' VjEh4W$ke2%QI y#D6q s.AUdȖJkƐ3. yK9NveM[lr` 7h#0ىP٢RoUW##CR@$-G>Uc#"}!A? nVv꽥JCH,dU o/kDG,<ސZ5]1JMϣMmS l>ݗgXamVdVT,& Ti=v,ײ-؈gr:jَ]}Bf0wO.O^nX 꿚ܽy$__ 7B`,ל M2bHðDpP. HcSQK|] eEH^`@UX*w,R9&Eq/Řl+}CF!ڪ2p4X"hI[Y(65[b^iJ.6N"GH,'̺D.i2 OS}KHu &`i]4H|YbrD.WJ{.~tei7vfe>剿~aVvmе2$BZsqO#-*>fcVS" s8w2p!to᰸0WF|@`oZ ו'2 :QaV*l1iEB24NkN6pj` 6 \GĶJ fI5SxmAqZd]ކD٪`E%b5ZQP"!<IC4Ϣ3dT0d(ڂow;D9lUl¼왇.9Xdg6H&]+?Ϳn"(zm10%(6kY"œỵeżY8ThlQA8I2 (n@H+YD.֜Tp]sBY'sM=a%lxx`vz*rH{4E{u&L!!Vpx( + >P {<£3Hxˬ'1To:u0h݉(49{LYw؞|m&u"~$VHThcKύU,cɑBL3sG{Yܠ\j~+bb]YA|&F+ `ebΐ+0fD:3;.ʙ`%9l'q?Dpk+6 zPqD&`I 'DRݔ^)XQp 1)UG´(f̅bi',V%>'@ {iw /Իd`a·vYnGps@!ֽP:!oPw^}]*ÌQ掾 פpc)k9@ɿn][Tg] E#ۥ4M^&pCiV .,V\pCF:d$V(+/4l+;bmCDMJn _YfV Շ>q',5{xM m: mzKGLqz}+gv)XJ`v ˕9;O-?u,NMvP"##!~y$o /k"u.#gk<1C~a; ӬyÎgaSԸ_JOEM0H14t2={geRNƉK/rY|~ab`?DMy@+ ͂.9bg[-_m<L\5Ws_g$_l\PX#ch-CApyh*-{wiD$H2}IZ/k@G|y"qsOy6ݡCK@ra<B QئQNs-y{d?׌GsGNN`\MBHk qa844+gv">Swr˅P4{g\܎j$InhkMk~x&XBzx7wn]vP'T>;lZAhHެR}5-E4qoj"vUr%本x<5UoВEa]U!tb*ɭV/`jl"n1r)d=NFr! L81@HјldF6Cރ"r-鐊hanmWJYuZ2H Y}ϡb :¹ǽ{[,^?s"ڜE- BaˤLi{VEúbs-H tZc@Qb[j:o8ɗAw[T>~}+ i_rCR"+PL8h3UuB+̸gByvSjAn1tʍG(h {fph-[LTlr1w{66 k%ВMb4){R;g\Zrj?Q6PkcUCA9nB;0!-m"WjKʼnjd8h-l]bޯSG[h`s!yKB (B t 0bTl#8htN֗RB5&UNQӑ?Y({3h']'qo&J!-ݝٿ@ $9*]һNR,Ldda.^tꈡHe%M'tN$Wrpl|i`&J.%6ݬ7\;酤׌wKze UF#r7%lKeJKmukt+_Q.&1gT1V(vDMaD$K@U?igJ;ZX$?p"!b9W6'{+&z+C]`6G]]$#k^=Oe6z*l"\t Υ7PaK;Fe1ˍ[`+c}DPZ9w&c5wal~?Y_CSgM~T_^|i1_dg~5^_31ޚk*7-PܾǂӥC=(ᬋ+H=Iȳ:0.p! 8K3knr>g4s>﷒q 1iw[vf C;SŧS;Nr|h𮁾弫I+=Z֬Vv irѱQwˆ>qrAH:J,Po9 Sp.j62?:36Qœ'* O:y9mUI“&Spc8wL> .!PnM8W%o2.0GA?-oBLC!B{'¡RTdM4vdF;بL+; fߺɸb=:?Xh<¢b]877y}S4κ+s܁"Ay[\9L5*#"J٩36Ҭ7ŠCuv}3{edǽً\ FtW%{JSbOv/>\~6ZȭK?yZFTkyiX<'^sc?nl?CXE$*Ha aޭB -E%M_W3! aeye)XBUoF4u8Lly%Xru h7>'-8dq[;_;;8Qt&&$Zc 2mQXKӜV?!c T'Ds̨ @܌ VC1KKZU.ibrtx1+dSA Մ8xF߅BG6Q; `HBC+}[s73hڥ½pvZ5j5QȔFT#D*- .y2i |ZsIx1 ɞ|uIkFٞ ^R]},޷l'}2OT|p*?Ф6 zY,ꪅL.<0*$…UqԣvpiXt: @v5lYY7Eўë`6WY W /Z19DNCRq1WncpEtc~(MwV:>PuH@gk?QG$`;si6xe?w CmO6\+dg$p6sf.u |l|E1ێG0Y|kGm2~\&F$,'Ѣz>%Y[1jd>&MV&^%FBW vgUF,JWidtbV rS쇝u%oC Ixɬ>۸rȡ5CVCTxl拎9`۪ugn. [xaªNZgClC>Mɶacȁ(?kLJYFB ѡxgYlۻ%WK F:99a&a_|#@@&17ΆWZ)м72:D>6[oݼPˢgų }wbo^}wywǛ?~۷x͗Cikⷻ߮nw7?_rw|7݉xݧ?׻=Ow~w?O?/?wzͻa7n^}y{u{{u:?|*۫ǷW}O{r{廴_>~xyyz翜cӏo^/{7o~1{s/{רpLZ@UW7a.d^^|VhzHR8 8yr7W/q×1Ŧ'a[i}FLI{ /Y1? Z̚7C"ƧC]'U^6]5pRb:裄BgUXD s3N.wO#>-GWȲK\M fC&_{2FhY.M|Lr-FWf$Bhp'9ڗeP %8[86[D-j!K('֬}"3_1L{ AtT)['y"il0ӈB$c)BHilFod.r*FU"^{0eٙTÔBZ:;Tp| "c3S9Ec#-w3Hbsң#l,ڳ6wP@''sYb=gM aqEzШщ̐?0m)1 :PMba|e:,1/v<6C Ŷc$*Q=( gV+@1vDX܅_!_' a}?3e(DzؘKU^#sZH"jgf| V!Yx((CRq}G%X@?T9|=FпَdYXKuXЈ IG2Ub!}p'wwP;!=7l< X(G0=Z%Y>#3j,3FѬq5Xf9#oXVLA 96]0Y(Cׂ"豞5T&g cďN0S{/FfG]<.ˋg$F+BիßFhkVC.a]S1{S~xӳuxo\}wx՗w|u3\|jV?tr} PNC P'|7J $#zO$Oh/1և Ο@eMD 4a2\L|DK%Z/fudRCvpDHhAؓ8x-ᡐR3x7`Hyjv:PvL% 5_P#=! %MLAuD@&FwlӈH|HeLBARKS(A.t )m`PYеKK^P:ɦ Fǟ0A(e`Gaq4/N;Ք#EXܔSyiDJ$1A.GHߧ .-%(r_( ELoMcq%5M?J*@X$ -PDL4L`1.(!5GP0̛0@%ШِS%-׫%4 ==lTBz.=dJE]0i7G+ᒪiXR#uQn-.2 E!5~@H~%$`(EfZ.)yd YȽ3R pYnp4ZܖBmG40X^u!JC fpWn0e$@ʐe NG44Ω*M*F 5€?!76В,/.cZjm'Ϸ&a҈@~+d7$Y53lHڐe*؇e[īS +nFM^'R:֑?X_i x"jO}dV˅9QZ$Ql$^ C9Sa?dN&nS:`@ (G}IeUx@9Jv/RG-Av3t|r ˺jӟ`fJsf,9p=HE`[wZP B܇$[nBGLV$LG\7*{u"u9V xXj<[di<2r5X䒪xXos4pHrDK"ƖTF+F7cyN,1Ƥelp 2V4{y,d@fQBAp=ncjg#]>BU^|9Ŧ ^G?]`CScJQO\WKxwW)tS|xc@ݺ0,*\M|e["{q3ƬXSY9v$bщc21wбM:&deV!Q.b) eU+@7:Jҵi1B*3Ã) ObI׻IdZ-;)>FիOcn@TKBpo<+>zB-` i?e=0#Q(^e%U1 + `^ђ=5J͒BSYi?daa` 0-aSȁ# B@?鼨fTyq># #Qt!Yp)s9m˰-_Q~V\V+O3)fD%ii=c(⟑w} *$G:䣑TDӃ$t!D ^xEv/B|6i }}eͳG+oCJZDXX5 &K2r8&>A4|<ጜʏ`/jaPDWrQXsAPI)FJFQ9YN r}*]aN$=vR`ϝmi ;;YUb7 %]p9Ct@_k+{+?. /Ç@oӧ7w]\-/ۗ {!_zWLJH> l"*[9Rq}q$JDͩͰMoH?PiHb)Ŏi )| y)W"r(f) H$S9 m #btuF玃h h{w8RF>1PDN ^XPMdLT$Nq~=6n@+"\aHh /< j93Vi<̪\Ke.`e6ϙv˕Vm*T)xȄ^砈 2:Pq?X59?Q]BMSb,TLj]^,@LVn!*K>IXnS8HzH&zK&ՏLU?Eb";*̾ڰ rPp)8*f 5Z-!ouW<'K{@J0̎kF(Vn,(+ ؓjjshѧ㞘TpHdJNْVG\YSJ1G lXr tDJRy:72.Ta0&&}6bЄ+"AA.J \ק(7 RPY@'s*)ayŔ*~Έ. t5Aun??b7Tyuw珍iǹ#|ǿ~4̽8go٦z~Z(5PY4ɭ!'%(5)Rݒ2O25ئA,U8Ck*ughH3\asGu1)% Yq9>9JdMLGjg4O^R[Nr"9NuKx1'/:5RЃ!z"$-xnh57ou{\=T=AiͺrwHeR@}L&gymb4jz=ɠMLBvko QOvkyNM+]OH„:#hs:D+ʼnhszW9"ⱞ.Sp1Zn{>k֯DJTx)% kVLjppWPZR@fq )PXUk3M4lsyQz\1% ]d )F!;,>lG"ħ^SzYjQh)O%5ze*x};ˬH^u$>T-v7G ]+ttejZDXS 1߮: ACfε|4c`| tSRk´߲H=_Mk:e=_fu5*X@uڗ&rJ6䂁-Q.j9S1b03gA#[uDceَٚ4# }j`ːT=I[e<Q,M0:[cJnUX%55)Lib}By%PӬH 4X˃jP@44:1 u<[D!FX`B&-e3L . ƵD6=Ovnǣ]}uG{kʫc(b,ePQFõqtǝ47T{),(*~5,8<.w,J#5QTOn,އ6E #cTieyjW LJӭlg|653"è;;9zITK,s߶~ءSk+#g h:?ců(AnTOVZѽV:ރI+,oXM`-㣒/P^rC#:|fzgTTHLuq^rTTƥ֮?~Ҿ#4ro dT?L%!J/t4!36{S9& Z*UOÑLtYۨME2uo ' >Kmc:[+P۴G*ѓˡG$b]AI*IYh{{ZAT]\Ee  s9tRD6x|r4cHn#-&t+$t(˖ĭ DMS:$eg8ּSW@h ar$MyVu'ʔ/FZټlz%-JLp.f&ы5p>0% DA|WK@l C:H IYc@,nxz|P`Z,j9&=|'1ӗ:a#vnߚ=Wuz1 3JCP#<̗%1Uzm㶍U⿦Q)CfsK(̘ VҳaUiqb o٦39.0H $f.YЌ( ]$GB$5* RfK/H_OhZ!QZ3S $vDykLԱ\!4zϛɑ=TpY,y\8@.Gs/j 1tJkL7u#P$RR5MKr$H! aHQ2ӪIe/fN֥'c%0ƆjG4z.xRH36C{ѷ*hRΧMwLy[h-b\4#EQ8uX&H>tl˱)7Ii^V>;T\:2bŒ"v?Znuñ)N"'e^χOyO=cZb!Cc/6]ا)5*PjePiZqƎӷj'ƮY~(I :U ԝXR.+$%n6ضbew͏CQaw3B .J]t"Qr&I: U>LR(.=jYR>kf,[,fYv,B%FHS︽'4xcX,{܅$f|*YBHHM& @HFHh lHPfـ9aD1E, -=Ug;ޯ Ggh#l|4/Adx)'Jqd&A#7 c ƞ%Ğ7ťȽ!OfԳ-,θٵ֎l J!uo2 ̤xD m?į¶ t626FiX)ԆJ+Wծ(BѰ'sA~t@XMo5 Š$Ji2MΐiY\5|, DbI mpj쵶˛̭9u-]؝0e٤ON"u{eB.ADmi_s60 I#W_n(\؅f"&&fZ %yobY(:F`=8lu7徺tm6Bò7wEq3F`A]p{Acy"UC U2fvYe +pnfEHP қhe4*[]}֞ݩ4R ANnjDʭU5*ha}: eT!teU|oMomDc0 @/8 wka#E*56n-N6NQ;i!1bD7- l0;y1ûwBC&][q~f+HMˌ(IC {OOO,"%YΙKu]i9c?R '~o7zË_O~z?|?O~wy{7aTֽۿ~/?={ww7o~}ͷ/wwwpwkow;cN8wR41q)xwwp?s7&g n(7w==%~wB\_T |ލpa&>*g?K?F{&/?0xu)N[p.䲽YLg'f?;ox&FL|7k/D&^3#n7t;*0aIF} xH]2a 9gMG0SeQͫ@uz>Y* F?|m| Evʳ EI^v7Þ%4 RW'E|/r"S D_fw-^Ǿ9xRvYJ l+Q-KJKu.A0>L@J?n{%^+}W~wk Klᑰl4:שٱ ΕUp(Z&QXl>"m| }9YjbjlMFITƢ4|g:^2O<xm.(΂~@rVb"mwCdQ2Ƀ Nly j]:ƫh\`^\Si+rv*x^ʓхeJu29`/ܡlR +%uZ)q>q]jaQfXPzǧ󆭅A*vx~ʴ>xv0lЫeA~Ŕfdh"8fg!^&D$x{y&#🃯? #‘EiJ]{󧁂AȥMz12?i^W6-SPx M 73,P6] >"1@(8v Pǥ.K/?ׯR~ޓ/e|c^m-6D4mm8F+â&fAucsa4:h/T8ΰԅP7śdsEQ;m+H o#pQU7; wNoyuu^^#I4CPlPb* ED.{!n\60)]6wL |"0,xYt90b5kl OsD`L%0jLWa!-F8,&){cQ0[i^8&+~i+3~ ed]pOnnͰqJt ͹J mϬ(@,dk|ePx|[jj#>ua :E~h){8p/o_:s(Hx:Ϝ<NIiMa8<< aヌ`XmqO|ŶtA$\"?>Cg۳W__||o_K|y??w{㻷z/ݷ؇B)ӏoÛw_|ӻWW^woP:.ϻ8 yvĻ ڑno 8»xiv']xTdEg."/f;2l̂q~P0;7k "/ Tz'Ȼ4'.xȁolO`Z [QKTfΟZSVc@ iec9l ȷ41>T%6b@T5\d]YXwć5Tp:E7.,.w6-܊"5x< w} bٖK82996n0հ4l3]WdDɌɖ氳Sc="[p{9ps +DgMDq؄`Qa7E>p*#r/L⢘,K#NINi:;mePfC2.qYn\?y$7[H%9YHDat9n?%]:lhYR~ӕ&Չ@;{AwN"):P.|rqr޸A8D9gaJf4?ߙrSʥT7B5= (b 2ˊŷ$MoqInWbW:"s爟9G-zŬS.N(~qmLx.r'.Ȁώ~FI@E! \~`v3%iT&xfڑ=R/nR>Y,IK+ԇ]K8HNIQi#Ж|0ٳd>},d1!p.PуP]6 ^V3ETD@9=bʌ qtæN) v66>,&d2 9/ y&%s1#LL{~ͺ؊u0-N:jl6n9*,lp0`Uania3z֥I7LD珬K#Up% hKȿ".|I""thzx吃kft '0[:{!=7aM&@DE#Nr!mWtquv/Uۀ15&e4cޞxb\L$\x \EßiL_G\_j?<%M\<:8nq.s%/` ݝ\ƻF ;-]~b]:#tV ufR!L0*4mt,bN/Ck K$BtςyDl*|Պx7s|V'YU,\>DvJĽ'$6',6 wlЩ?d i6BFf5)PQ5%>B#tX!؁8 ղp&3P{YUHA^_e+ytiʪ $<9!Q}"Z5,| aOTancrj->A/᪣{“ܒEتnʬp0WZ$I:d9bLk*Ϲ=P8Sš8^ce1^!Cx+;4Ckl{"Yr}mSHt~\l`s *()1`[bot~17 7byZ#`/x&: Ts LܹKBtHVۢr~I#^FW7u׬ZXd=^Ul?2&0PWU~Md>6uż|pn|HGm\$샖+bNv}] c5:KG@gܳsC=".q|Q̴fWdWgWkyhJ%c~pk:($/+Ig_K^s|5!&ck򡖾侠/F`Ju`YO97 /<@x:+@Yv\ l\U5;UU(ޘvZ@ Uy^.f#5k!y 7 p&-1CSdZ"ت\s| 5xD%&x^a#u9J睿L*^1Tjb~^.ҧ4{6697(p9<c H2]{:zDnX(kL+\6\^ §|z6`iw65J΅IRGw vb.!=1>27Sg:IW芺9r''>,(\떪Jt6sE?alNqĢAӌf2[❡d}!W75T ; V6`DqaV&2.xQ;>V 0 'mw{xkm6s-}rȗ5qa]Oa j3ԩj90j2,MAM7vK %9-P Rw0Mav5m*;ءvl~#]9Пaʨəǖ='T׬JܷUZ9%t =}" 8bDSQG4#ce\ۘ#Uب` S ?$#Cꊔכ+ fS7_6TW:g b?eC |IK gԀX( b1̩)>sz@Lو;Rn ҕ|uՀZO$e^9+i=yHS tfct>.a;bx$OmW|@h_G=BTlǾ aDjsM-e+t5SҰîHHC*x e"BU[v7)a)>g#d ^ơ쩄J:YL !"cD$ވ;6"` ?HE(#5͢ˎ̚سdq#j"BeZ.D5_ˮf\L|ooZ6D6K:O5!:Z0С0JUF x)[UY_44^ZX/e^kqȲ_D㳬z{],zDUF'ZQ*uZV!:Eu 5@ 3LA̘ AUfr.Ӕb%ɍ3ݐzcW ڙĮ')Td<˻E=iW?t94[WyY+Uvܩyqɋyeo &hze]/V.@|5UREPL`:se4JNR$ax {m7g.s CkAg+HZ%t"bBڪ MRI, /'UWuN]]#K]idA xy_ hbӀ{(3; ~Y9TT0 Q5" g1ߜEeU]*d*D8>"s/q Td*r"b+Gyvjȑ@r[eT*$cxWƸ"f(:%mJ}U2G|`ueyATYQ<5&r9Lŗ$|zb=!!ԓsF^$|4'&ʅXo!8Ɏ# J:CﭚALP4#+qޣWR03拹;9,c,Wh¨zu(Vm jjOe^g 4BаǠ9"ŬSg *[>U"z.Lz^ (U  ?PvOB1qd)[S1IHEJUR4?gbʨ$AE[C eqUS{"XT饺sƦYByfK^qM(ORo[UrXU3.z̈́- ڬU >6QKV M  ЕG6MҖfgKySƛ,ZLΛ: S3͐#ŗS,G1Δ)98Sg?pfW3U >gj̣re v'&-iKTNK_ B#Dv1& eֻ߬X(_Z,WSwրzET11|1],OŗUtQPҠC8v5O}>vXQ`cxy# }ulV{kV-:q.NmV:*·UՊ~YHr;?"م0b” Q3q)Nbf-L{7 ʊ]Y0 "1Ŧ{P5D٫RH׈+LYwF rSr5 1"̸ƔB=ֻ^EqLRb |S5!PdxƔb4l΁e^䀫cJM׭wX]≙RW)=S {} {=>S*VҥR lW]:?"JK.Q[hkVKҝԽUٻ"mkLx*SگUabqSʞt)]/(M q!J׋KxRd<|2TVft(eD]G86e@W&w\2VTҤR3Gji)-,2MVbW;s~M_HS4)Zh9kKWLOx#ӤӠI17 TaI,Yҥ41@\I:.Ӥo'X#J5zJri2Qf0 27 + KH&~>qԐ˦n Qڈ)SlQfTr/7ޅʗ-ҵR~CG^w.WǮ#/1(* ;+'BZh/Ʌs#ZXtiVz3e(lUy&j~rP[#WҥpS4DԧG&Kq85򑽍,/TUe.DD++V{|TS/+5艈6z-E. ɓ˯7KlU?K.5t)uoKRK*EJɗ.4|RƗպRM 8|!BC+][~b}ܼ7aZYV$cn !)*6YdlxQĶhyWUx%_'Sq*_eyz*/2υU8.Jx_i&jU_jdsBU+W`k_|"󌴢/Wfʱ% yK_ `.X w>Xk^@|4\aD붥iG;#{% )tؠ0tj;> 7%+_0]ax _|BY`8I)3ZC ZͲv65gX#SX ^^ ^~Ho0x 2J,Fˆû@+N?|zoJ ϴI9optFWs,Ɔj065RE.M;\H* ScY D=k+wEyDȂꊒd{ uI"rZB-NL厹nc\h b!K%El ludq6bH2nabq& pR6KM\PscyT\$Y̌j!~a T_XN,wE6R*׌!m 0~ɰg5Š&O 2X>"$*hYXn/YzR@ؔAVS692488e\:VT8Emm3rv 64pT\&< W)#K!=X&!QMJ=!`H'%̑bӉ 4cq9@̲֬ѬT{F57g s5T-m%qn ґYLJKQ"7HBL6}9{D"A(à 1Ez]Fk9 Ge6qWd:e0)!EfmW9s{<'2&a9i$ ?ѺLO P*M-ZQh_?0D+Jn3i;{X|pZ'E!}hM6\UMs^!q1D1vN\ avLs<> - 9 ,I)''+ ~_߿Z}}ry7ϾɳUeY>{5ן?˛_߾^{oݼvۿ)ֻ_߾Vƈ^ݾݛ?ݤߧ_?7?ޅp|I Ww>bCŧʫ|~_xoow7|xOao?}װoo~7޽ ߻ĝ 37/> ߼|O?|˛ٗ៯¿^շ/x}7woï2Uw_~;I xL 4&VqS!=ϨY9`,80!&.4C%E<̆H״`97ҝt<[sf ۲^8ԏK-dV:ֹإFa9uG1( |Ԏ* tٹz֚6smo9?x`JT gUZ^J O.HjПFu2Iag(q#ڟIYTIGF@0o*낤 TIqqpx֬y!?y=2P @]10: tt auhaŅqZ P N¤IO݉PV+ʏ&5S~ԜL%,TI^b,fjO 1P37M9y_9+ E )lSw %?r\SL C`4<cL% ֜<ELd> @Iy )xT #Gg S$iRv Y!EW04q_T?:ZjN?.Zh.gGAKnh|ryc}{y / P{ޅڠRWC/*0J1*}P%PwnZX8\'q̚xDTK caR KGK)w Q%t^p鄹S}Y$ZR\sGAjQ-Sxb0o".MGGK*Nå?+\!O M *S *9z7Gӱ GMmO55:YZz5u\Zj8jJ{?/E XdŘf1bD&pOS]J$}4 hz,hhUif>93x[ElN"*LOCvR,5],t5{tS/ l9aA @ytN'UW7=g@j9)Eo}Hy8)Vة;;zM~nfWo:TCLѮN̷ȍ6%ƒ\YL$RL, ,AIiF\mlI'OتM%)f9T}Me㧀 O ,8uz¡@i+OӇGCQf<$ʇ(NOV/Pc YjB!?);<٢\<F32x6Bq4 C)a S$V4i+_ 33f &SP>9+T4AfugG$"[>[j^kE%ՆVq+ i +0>M/xh ]U@00RR17OJ9$p9idzdWAHv:R@幣UnNȒAh:ɱIaĮ0~nueufŝ3i֏2\ :-DcDlkyqHQ4$)-9QBkb[( #]KvlҋO.ڢ>䰖;LܒKHbr~緦ގf_O4/:"@[Ʒwi9ݬ}ٚ3@[ ݋XspJ!h:"lA^$MwJ怱MI*QJ:Ue- U[.su֪MdspLZ0J8q4A0 צ% bj89EE'UؔBr# B&QQݛAT8b͝DE{53bb41yKQ:b|4qj ,JW{Y{6^JYxm@>P |L X0GfNa2) "K5 3#ͫ *0,E~r0W6`5b9U)ibQ4GxoeR$: H`F=2G6繐hCpWa&\oVrh`,5Pj~hDAoTH^gCJ tDc7,p>s_!UKCJuc꠽{+j?= ~VP( ~gxơan/1T)bpfkܼU$ɡ7I[FgZ 1`_u08%|[s1)g Q9Q00aT͚B\QI4C2/TMզxssTL@AT6İQ h8DT__͎a6m^VVXW2AR2V[ye#JVoTL!h̏ "p6UZr%bw6oW~z} `V\{b#yӽeap6[)D]Cky.`fg]X0/Tb@[]EԊ@FhmT㕊P1ϩ7 #"8h$)%bɣt $)LC m^c0cFo  yV_mxH~x~Xf %鷞w&e MC h-" #Dd#"ИX`"+CP@D ݹ`/:FDbWF^[27&xoK)[wpP0J1יDD B,#@vQ9b/:4B.Byvmk(bCD|<$@=ՠt (AgKe7WcӀ#ChNpilsL=+&C8FRFyR>C ,ocD weא^ lɺ@}[P yi#6ۆC<΁>R Ed?"d2 m*azrI]<v5K#SƬLlfH2X`, TNJ%BQ$3|UX1{}L6 t""s "m:Ȉ$O;_ފ9q{ M%ξf麔p"YzAYhEb5Sy%!`1s̈́VUlhM:ȶݤԱ;t)@HUզ# :5j ֶ|t ]Dn~7J](10J xX$d9ۈ;x G!c H+CWLRŊB[P1РH Z*\Ȯ!40[yܐ8Axq/ Tf~@A + 7dV^Z { \ ,jrFvsKDD"H!ntgI^*DԾz)7F2o깣ؙ?DHT!)n  t1)ᇕ}Tt9RYA (jw rYuᑛGG=^UZ EH~ᑛG w; >L[YӁ: U#Io#ph6#ԅ[cPQޭ=@}TT'"ZlרHPϹmwS{T$e$Q Qly`+Yjk C',(OwSŋZrxGS9Bٴ ~%+jf:VY8(@KY~jpIuԋ`YAsW uQJwf錊 H;6QYYjUa RgU''Eekb p@FIuH 4R GͲfȮ;}@laIB\rixYC 0^rtReh_Yڷ#FܱOdPxllN+%E_ҁWݤVaar׆1QFESi% [t6^ޮ;⏰]V@Vyq.(L3[H)Πlts{eQ 먖\T1:bL} w5􏧮#w8JЮ69OI8Ska#LJ\e4Il(JRhā@q$oT꫻|6Cߨj[P2T1R 5Ub/*;AFԍ 3i b1,{p3+9 Gpn$.T-Z@zK LmNp2Ƨp9&냶V!’N1dlCӐLjP(ЋE [x"T*_j"1b$|TgCϡ;(.xH*O1/Ƴ3ᡏ, Ɨs>⨤ QѰG&uJɫ~Έz$Ɯ .C(j qWQA&Z85W WS)MvSH R;<<^_3[z%oeĞ_r71Rɓ20{TZHq\O S`Y>FaHN FKPUFإf0`Yq#W.{P2(u^ \Yjm[mUD|oHbh0\2Ѫo`_D(C)J5†7CujUl͚|X:{p@˽IزЏcE4a)'U]]B0Ra%5 hA т)SeKO|}3p޸xiSkq |]xz-úvUvd5bs7JrŨdI K i/taxΝTsxe'*JRd3oh֖#MDTcX#(+z|Y:L[Ft5uaCbAR&.L{%UPQ?Hk*]UA,:6#rVbx+Ta=il/ XO+Yk(a!1X< + 3>8„Ho) 3< 3H *5oֻ4]]ek~5ڽk&q,A0 @7mobp VWATa{<5i ~OՑ=JxmQ5 "RGy<&PQo,?\*mg"1,>W%RFd5f@mU\NSkaK3G#bo5t} j>9-\g6W:宱Do9^q 0wQ?pF]B[_CΚFRQjYUxe& ԛXl&뵪xxK׫z58*ri՞79rEiTQ)-Kܞ kՍ%''7#GFqArx*8ۇCqVq(a!KRpfGѾo|7ab_ǰ?4H<[;WʪbWbII[zѝp z?$P8"en/=k=ZN#gf!.c_a>3 ̮ߑz2Xu\?*1,f2TBd@) A TvN(hg+DLײnʬ]QErtƱAHuL6T7HeC7>x#O~rsΨ㼗Xjsi]ŀ[IH_)Xa Ts͵4/ܲk^nznpAWVe Ðw˧j?q>[ӹ7.F@7TVDuAPtQo[k[[d@1-JZwE2|ө&RQJy!+~Dtot]A9B3' .7)ƴVTDw'^WMtm&"ҽ^4MIC&_2"7vCF톰-!&5]0c*4JKݶ`xI7Tݤ{_ZDq RtLjF 4;5Lk."[L|;6JO9H^X2-Ohu-[5bؔS@p($y\WrHCKQؤ\59(Jqj7h-Eu{.)uH Sh c FyIH#] u\sQK<ԎAZegnQ_k),-ʼnIւ"/p#Q(-YrlOd ͑%8F˸7ZFJ+sA|:E,YnXy(y\70 Rud3z ;) ]F+-kZ݅WשrG!t;KZ"BDmVŌгYlϵϯ+V퀞Fj*WUQ xc.c@ΝFγV8zV[MQ?fAFj=A>-[)<4[Fk,iT*4RNi` yL)0U0Z|?(+TjbP-GA M׻tiHX쐁h< o"0{~ $~qlIܽ 0}<| u30?r?t%-{6-Vx66b7v*JYp2!VKfVL(:MF_0 !?O닣B7"?ޠ-!:cUzEbI ]#!HȂv p #/ Yfo ;J_XcoXY46Uz8I#:+W/˺@x2(X fϋl/U7`Br.mvzJS= `f|NNyD'X͠ `&R5D fxpF&܆(Ͼ`'37͕jtq3M<#Qytfܞ \zj8F9kr:\m$z"K_Uh:8 vrSsDPC_6f|qk$&P2XMǠI^e1 g. KLnlLΠrFeEy b,mR|=4/vWԲZxz:e^S6R.gS@5q9vSx&ARU va3l *ؓƈJnS&iA:ƭh7$5 ELG˴eArah5orId$wY,&sz GMA~e\HCFM8%K N)417yp.Ztn|4b~|F^Xvj̋( KG0V6PLѵ,^îGe'd9}.NbP&k[MC,ܣ`濐nZf/X5%q[ 6IID`fE}2p1G}0b]NOo.: fmwMMzuo9:J")w\D3jBC.}kgi}{P,+|wQ-@ In,*vǑwW3þ,*}c퍉7Ah>Ys j} 7C}܍7V>Ei.0nP.UF l {eW7.>7m u7:x{څux!f^ߞM9Sޮ*ZP.=M4~A8lloYs04v5E]Ioa`X.'JvMPW),. T}'IDsi |jղmngbݸWj >WZL6δeY3eB(C7Rjvf11t -;mjڶq/ma#> V6OSfNe`Ҷ]mW2k= :m/NsY6$ZpAc;7gNSh}Mۖ)h7;!9gMU ?UfvO7<o_>q6.>?>}Hqգm\/n}d~|?|{o/޿~7}gOͺe}tzo?x~|^ݫopbjk~~~ЪЧO2?o_W}/^zo_٦ۇo߽}~fowuo/eE;ۿ{x~9|؇|yw<}vs~j7_~Ovo77?lW~&Foanm0.q'p^EJ%&8C1#CY"ұ,4F&6zwV`k!s:.8]Ex?y.[~i*:=msiuNKތ*]Ms(, Hnvqx{-p> zHa~ f=R6TjZ bttC*ԲZ<IIl}.(tY,۾o3YUDeDe`?q0taZl֦gFY!}/$ jmMQY̦@pR_é=h[:XtK02'NVF/㣜i&w ];Xt]0t+s`:~D?ߎ.">t@ʺY^b`Bs}I Hg`UX:`1PRvU`IVM)qjKM0m|(0.$Il}eak]NZ؋]= BephO0nk`&`?w4Ei4mUv aȸ؍'n7 sK,,8j?OacAЙn7Q6%^}'s8? "ǔQr%I"6BRnRT y`Z`gK,"/|`8/> I jFr"xV?~^{?&u7 ZzB0kilu+5jJLDLG-D*EL2]ż {Álnbd@Ad }(2hădfìbI/ (-[@΢ᾎ5@h2N@Uq1QƷk8xl60AR]mtFy)h%BE?w 2+P& ͗}]ԗ"pxs8!2O!%Bb`uHi)\3xVɛ``̣)*y-jjDeT)NXOܘۻZaKt[-gtKaE+)bl`P63̎I0D xIJό귘H_AW/6}3fi]֥cw Ω=4"R5"}_~+䑣N&MwIsocm̆?c1nE0ΗDH7!NҲu8C(1.nk&aVDZCm<w2`:L~Sa8tp[.' x۷z xe Ra֊x$ Wy@a&1ʏ3"ks9+v2g›7e)&ڎ-0 VJAdyuy,c&}}"Dt<ʗšY@ J f~@!5xB%Oɷi1٠-D0fVˑI=fS:[rK6ӡꬓ /cllotuٙZ=l]sW46 yϘٱ @YDS9b=MƳ'TFpcf֊r4G>֦&ȿl+v`@ 7YW0)!5o`sp'r9fMB-jK؞ eL+rJ&fq՜13GDS#>qs9>%=$lўLڣ Jvj:EWoS n; -+Xc%V!: h,@_L$-.m,0;Ԣ5Wv@(vzAh }e^\)FgxVќmEcxSٍݠyaVi>8m魦aNόUK=sg Pc*vP.vq'jU^yӜuFL<I[NܶqnC|@FM:FZTzU&nǏ>}v~y lG.;C aS5cX \Ĵ]3/i./c_a |_#8 cɳ[ԧ`8}Z!d&lu!0!G}L7(Pi VxF 8ʜQ s]\WaA9yθ dQbWԁS-YV^takA@A6eQ6d#.M= J!hذn TE T5ݰ;2gVf66iaj 4)58GL,"& Qqdz F\IfQ$0= ;}i\qht09t R`WA@n:6%:J^X@ߺCHqⅶ=1XQle8'>&Baٞ!`Ü-3vV<s=jbb5%D5$df!ڀ߁)(L G3 l?,gu<##j 3qM!9Him&a9dt607KoBQV-3 ά+^f0bԳ昵Jp{) D(%-;z (dشKFԆ rRmesRW91٣GvrlnBǥd+)i=2T֪}yltycjœkÇd89#kYh,!jn/H|4H;ejv CV$W|#su`[BVxiH !arGYc٤LAu¢̪,xXdsp mia$Op#Gm(fعicA u=e|̫PJI6D{$(&8 >(2PqD0z0bsA0ץv[- d*QZo_:.:#2gtWYZBY7>ScLgf0: ek)8%;WWaylRSʰ!)e˱k2c1LTt8̍62ehBl,%NH2f˃'=}p U@bgƧRwZś+>mz蕺ϧU~w/?v9|y-+o˻#>xW/~ا|@y.$7`S<ڶ^3[*Nf\`3d݉ EClSxր:N"y()?^*6v(t"* _B f[P]4<,BR]>ˆ4TR{ 6.&+uq53E}ܬ~S0X3yF+ze ~XAuٿ@˵T jϣ2|S9KH;.zS@rFxH(1MJ" )_vB2cBqdc?E .-m"]' fuYtfIK sU h#v[DaKyMXq1י'(T+RY(dq2#L[ ^N(.8 HEQ4pU'Qq4eZ-9 EfԅpmOD).^5eJbVwq&^A]Ɣ=$̪S:Lf50jo6:KյPaz"aTFSx߮M%'eu֦2R#c:w:KZ΅3g,[SRj>;n5gW^-ZT+( #1[ɦ%:LR.@`ܳ>uZSmM5oiS,`N\ 3x|L;=&@aia&+(4u'NO8jl;@Wə\*uM׿'GÇI ő^Wz:1w69]qdK%ϵǡV~[C;>B{}wow~篿;䱭&m?Ϟ˳ߴۯhuP _^ ݽz~y经_x5{ AsC-ZF nTmǘ)4Q-JsUE+8c쓰F% ;$7O*[`bd]|nJs@qPjsz\ԕF=ihdoEC"%STȈȊ#08F2Ƽ[G?ʁJc3(L F{Xy¸8GP%1J-ղ,ndF r;n5SؿT,qܮqKNYX7Ey:u\deo8/t3A 9a.[تcT#(ʕyV&r3{.NaOp?ZI9 or|}9[Ds&`o3P/߯C=N/>)R8q{oq1. tiR٤:I9ߑ\-8R)s;F42XҔ P2lzF7@nH Rڞ˂ո݋=DXxxL s.(O~;z .bW8#o!<%ƑS!O{aNe7\f4ʵLBץk7ă.t>\>H±&8)uMfړS$ )mLrA^p.IiFӿ:&y Ib9m=%kIԙH|_kvZifZh58J]CIⷾ\81yw %D`S0 Ap&HSqtK߸8n,- Jnn%A r7mpt"juE ;Bq3yW*7Zmʒ1$ŢnґU 9A:-J4^亦%ĵπ-hΛAᩎnϻUkdpͤK4Kn݄;:m[f`t|* "X$!I r|70(ڂHt%T* 4F6 flı#t7:2%6~@7=Z}&]%(;UyY'-KN7ާ=a>O߼//y5i>sdMP$^qܽ`QmXP6܅~$BuǺyD.(A-C7޻nҧJYj!-1q}5EdKDgc / REVBB.,PؤE OG$Jg[п֢Ɨ(R] \$dfT@<Ӌ$;ؐ))Z^w[$#Yc5L]3.>3X'dƭZ[ぺSUnӢ6坖D3;9֖zѳpR>Hv{Y>9CD9G?8W1%2huƢ{PP鹂iLxeG b ÀSd/.g[ktҙԢ &؝pF`m.sFGsݤ=3u&:oA6;P4_W$䩬 V6^MG=^@> K2?f)YFy_=8}K$ZJB1)+hMjTg*TIasB$E: ILC*)J'ғ'IOja?WZ$0/X7ᔪVgub܀}xr`L.C㉫ޑ@9(?L:0ywΔY"!pШMPj- qlvjp*h9U1dŔQN+s>dǕd8)ˌS:-V=.[TcMBeC)Up~Y{cy:yY*W4a,F%K/Lؖ2v\g%j}ђ&> @irs1A:x ~Bs% U&hw9d]1Ayy!wT ܢE 11/08f%C$Tz̲:f ܑ4Sė#0^9E!+(Q3s%/zM8, P]*We2Lr5FnQEyԄE9a/Bz6>q0] -q*? 8}Rc4RvB}@N@?feGy.cTz:bNrHD᥄4&E`έ3t2?RU00牅 櫆&0%(!*[@6γ0vXe=A̤P3%HACѱ^A$RTUݦ]\ɸPbnjr{`zбs4=7!^>SKT)]NX@*ݨA/yo?s0Ɇ|֖ݭ!u'"Sv4g sL*;P3hKWm+N)=l 03β>AB&4h3~dbCh.E23R[IZ=#Fb^﹥ 7?pjpG#ˡi {t *\Ptǻ"8=h7̢p6 i;)PfKZ?` a &۴9|(;aơ5ck C m\;7H^ sHmzsk\;D͍H͍XPi7sLZ: 6\3 7L8li'@Z:&cLRʩH$!Ռqp[ri8Pm?`dT Dy3,4WYDjXCF=2%lxڟ n\PUɊ:-Huda Լ!P6!.xX%aFƹֆ8:!1F3Ʃ2Gt!j=4ۃȳ򳜽eJՌ^d[ӓ_.F. 9$DJ{GǺl[PuXn,${)Ne+ M,l ))SΙAM?F.nS-J䥤˰h;Ǩ.pGF!)DF^\ ?u(NC-"͹33$:f?Y8wwy/.c7J)&'~3evC+4Ln=jD~<. ;0Qil'"`OR=|.})A.bGOBY9kB'"9r2@.(J+er!H<$7¾Ѿ1zm,bE>)eǎ#D$ŏkQ{x ,59J4N8qxbn%O$y0*ڄl:\*U(%AJ[1`}xا4(dHboOXɑ咄eaPPH)v1K8D Yxɸ%ywTGiT#%R ǚqFqWzL*ud]ʂ#C>¾+L,e870 \|HFy߹2[,}cr\^+o]bxtw/SLJ8\]1mkd3[k_~u]Q*m!5"+*.6 Q=\,j ]t>d~-q"j2|;6chVZSGglΫHϭm0uFf`"+9B/5٤7 9Ѹگ9'îjixܶBrk~V =5r[!x2Y~!֒w&j՚6]tf :z.]ȍ:nExDZx;K; %!҅e[XXmvc`Q c:V׶M',W S-:sǜRdkNeyo.Z}I?y zxS<V:-ہp]7 DžAfIAK76N}ZkY/ubym Ho`Z fa 9 BC(]Y7~'ě2l5C#<6fF2$y+2*gd+2^ T+Brk̊LWBZR0]zCf҄9+Ve1]iK6{\P2Ub`~7^̤du|.[$ oZ:҇juj>ba7c ^Џaĉdʳd;ж5RqMuH%*~@fQw[0o * 1Rȩ"^t8U竭 d+h-%Y`E`2ybI]8$,u! lKI8@ڣ9ЦTU4 e MT.!Z2W%L>}NvH( *ÇzFrl V(BU-ʤ=IʬJ`9 rd!PUw:$g2s#\ްAÐK": h$=wvĊp'?uʼnAÿ< o 1ec1)xHP"Al"h'k~ZaM/ldFFKDYҌ݄$ )k̢{?K),]LW#TEa ts#䮙F)E%M?pѪ SC4au]iW=(V"%ǁq1WB_[`#b"L#Q(Hi LYSN|OAcҏl2j ib\ L4=\5`70n>F C*-j˪ԒQ/P bLJ16 <$Cwf[Oc,JvjY'/ iiP"q!93CJ6.;O[Ȩ.T NaBZ0L;%^#QY9 ZyrK* <)tH, _2kd[wo.ucw2^5F{QBG<;@p.?e 5 X|>l`$,hߦjSƒ+i'@6f(TTīsOX P7̔KMC<** ֕YX0uJL$J1>5&niew Ne+P5*1 VSVKLEÒ)j]^17htc2?/}S0 lIc@,"S -<FU(X lDDAiVqÀBqmo`MpڵYPߡFQj$2DB1,U(*kظ} _W76AmM|MˍfA۞7XzHTsJn(If bi۴6X簭$ k3q -hU۬yX^0c 4bN(`:%nsZfZXciȥգemJ:{*6,xi氽JFj ,B?~ب- 8A"Vl*= R(,E; zT!deC ͖{艍uԺlf/X}+==NLG)$\߯Q !MiW6 jp~Zv1;CSײ JR'*TS"UC*Stؾ" %xz20{blɻ-b[֠# U'vD7!c|M Qg[mU"BRE |:wr%PO[Q!U=*\mz2i_z Bа|e*:۫^f!,v{Ds^WxǗw?|ҡ5ﬦ\O ,윿snziwt!~DO~_<:ȇ/ۻח_}y͝{˯?nH,{G8H7>?~ɐ}>-,V صH-,-=f&}5)R}HIK=j$ؙk^ "-k*4bt,tm0%j*W*5sSj IT|H8"I7z0p>-iߴ8" dx)}'|UTMIphH޴= ́NU6/gOe}ebx&8!QJZwXJq.=q7'$>_}C&=MKZ"Juig}P`r oX VTLx Li< B<44-Ur}A$:Od) 9v\WgvUh/.a;1\ DOG#UFv6ڀFFg/ pt8ݹj*W5N:lsDGP]ns֙/BcBK !TXͬ6&}sMjk6~]d$Çb'˷~X:RB3}xb (yxΡ} 6vwIM<RNaAQ ZMׂD B/K@1o ax05*_.oדm#Bb"j)b&7MRɱɏ:I[@ׇYB,"};7c4 ^:uM% .đ<;Ed3[dWj45)%v6XrJ}ZC r̷XtW܆UyҎV G"GJ3L࢟>^ĉd(&/Nsձ/#3c<@;ᵅXجJEE5^ՌȼN;a}2*PO |ݥ-Ȏ:=TŒ.S@QG:1,q NX$8@uUYʬg䐭e!Deg9K"cY,[=ّ -݂T&BLk,kX+<d́ =3 39F#ǽAT;=[VS2oݔt!z ՛HvV"йw?5BF )5Eĩ (3z\S!/2 I=ǔhtr3gc2"=OԂu슻~Nh܎ZUU3¯,vji8꛺ +ŭ(섎)4W6|MpimmM۽l#g)̝.wD w0/MS訇:Ň)&@blv+_%8tlkJ6HhSϲPei?47j BRuDۥܒ9B^ʎn*M4+F&6 ,=2aƖ:dukСW2CY" 3UE@{Y+<3hyv0Gu@W7I;=~G'SglA_l %=9?NKc6ː_Mg-פ[. zPG[яBEQ8V Iq@:eS2ОK8FS0CMYjĄRJjCU=dYWku Pt :UwP:cOq/<)NQŨД% h f:פ_ԶURqF%RtFEWgkg>d fO|Gnc!Tz"|uʎ>v~3;ؤ,\Pk\az"4Q|B+>#~kPqS 5X긃TwD`/vfA'`xe2]{Lgmعm:8}uQ)x>Tt ;''q~r!J~=Ou;kVf2-U*/R ~MR2 f-5V4W6wX2,jqVaױ'T7w,CkDذ&: C5ABgptA:-ª[( bƃڼ fajÚYr21J٫.7FLz ٔ)W)5iHÇMK-a `6:KQ*ºЖM2NȚ-T j6n@Piwf/M\k,1Zqz/]؜`@AI v^6ʲVU<,Hƣˌ}ÛW#DC vG= 2>pZ6{XMp Ejjϕ^Rmj%i^lAfJWvEURuu$nהR =j)OCXI <*Gxg[{z>4O_;~Vҹ{[,-[U-]ڏ{f5gwÁ Х@XLc~0F(֎l4Y *Mc^2Xc]!UBC9* eFM~4=|>}34gCa԰5˜i1u˶h& (tf.MgA}\To,ɼj3|AF4]h| h~^kC^cV[yEG:8VZvuh}uJϲKw.[[hsM|aԡUF1+<\DIg|vб< 4U{\q RGr^RQjhP#:i]O[GOnʶ;@u)Þs@Cq˫ [Ldt&:FȈ 5FXl)=I#~ラ}e]- ׯZ6 ܰzUÊeOh `|ẙ٦{g֎f=EƇ rw hy꺸XxQ˴ RbRrR6pvUV-c*x\VavDT+(xRzJ!HygT,8LMQh)63-Z^ѷP`nP!},v(Pi]f0r!ūN'`#wVBE(F.Sr3ɺRH^M>]6Pc8gxrԃz O4K.l@r̰$zmΉĀtN͊t1I駵ȭ@! Ք7ݎ2KMcvr>@d ]2OE:6 *Ij*0ӻy[ ɐ^夕iXyIHn`p3Q-?n*또0u:%;I3;Nf͙X\zB*DkcYpYְ,[I)N9TXq8fM|"H>N=VLep|D#TI?bʒ-yre-Z F+5"ǽqDb*GpXN{/+MẂ2~I]!l˓ w虲IRv(—#.jUu, \Kek-RU_Pm-}KuqS}ȞIg[~(LQ4Y@NNzM/i Maec1Yv~X8}ΪIZzG7 H Q tb'+\ASQ2%,Ls:SX59")'^qM}r.B__aΛ1l 'H@Ť?.u7>$M}RQBdYf! bQpS2ylF,;jvUv'&pOODJ Un)0REPEZHZQIa0 ^h4 D' _s8rp=.Q20i⋥EEqUO~|ZҘMbG{Lz]QQY{x0M C``; 4uwxr僃aPJTΑ5OO!$NA`cTb1Ty2#|rN0LN0R|f'h6n+Sm 9עrZcsbV2A#jEY Av4-TA¥2.m+b|VN ;l@ -I%4b27[.Qֱ#I+Gfy6ߓT(q `u&_^E ;kɂǞX|qR 5IO g":n(Q]=E4w+nvչ=u._s!°rko$zk]U/=0wM2;YzE}QL* k:{c뽿S +6VItIjw\WNeezM xF!%קC뢊uܺl]zI''{Z*z\8C֮Ęĥ<ΌC'\-#XSW7^ҷ)ZS52͊nb"0a6`0cQKqPȡHqTϹ9&S#kx>LRܮ2>gMN }>FdU5O:0d̹wAOMu; "kl]G,}u}u$g1}#s_w. Dq ;hJ9Q\YK lʹV4Mi/7ˉuϮӛQSDFֿW֏{J(=1\ݐ땞k!Pj̘6-u8 _2rX,b2EV5sgVT7woWCUs{an?K'G?Rv-H+nW[VV:=HB2vg9rH&s} o~.~ˌtm/Ð Ŵ?tTOQ8tjQNưa;-'6- GuuN\Kϩ:Gv\݈|tcYsq9 :{G珥dodjZ΅Y_sȯT!w;5=A~}_. =KGcM,o~=/ȣr?hoHu~^R˟WXkHH9@ٟ=^$qg}Vmoh<^m9xk$#l+py2~?g9%!|Fm ]wNfhgeZ7?^^id9h'ehBC+}Y7};e534ˆn@˳pHɬr_RfUFFg u?OMS}O#OWȜ38+w%Z)_|nʜEXV.^mR:YY_2/>Wg,Lt? 9@l83qN:XCX0PS<ŒQ " s'#"WItE,ymh\l4/Lc?oa&9=F>_&0{~M *h$)\gG`O1Q0G>H9(woO{jW?{yݏ?>{˻oZNA/J_OtoM~6ן!N͟?vz -ŏʋx~?o뇇?O8_??}|>~|w}ƀ=^|Ջ7_-_~|+ݳowo_y=_Ǐ_&}}WIE6+Q(H -J'*+o#&:im݋CY_3t3ͰI11y w:)33Ҋ`hpvE{?t'-8@>.jbmvh Bi1֯x;'[`FČȭU0㈇ I$OyXrsVC#*eW(JH$bCǔ0t|a6j)&8Oh] /ePSEƛ-(v-8ǖR' +hxiOI2:#DH_*wlDCI^|G# *R#Cd-B}tbL 2"Ge~lX%Rhd\?:"7iq$g7 D|$pgV>eQ^)u4ɇ2r'_n!>{3J8߾i/x'z_Ayo懷_ۗ߿Uo_њ q]+@@b(ܣq݇o9m9G>.]+o Ѧ. (aTtȑf9YU-ps( :|c9& :*jTxJglDG.RHt$t6Jȫ|N*D h6le 2bpk: _d{I/N!G spĒ]}[yJOOQd4 TEeXpderX2D*Cb䀩X쏂EwdQF-`DD:ɊͲB#óNJd0Pr[1T q#.^&^ګ!%,GP4 ^}`Ry-Lfa*rE!"Cj1d1VI- ayBTOhJFa# a>Hk]r.HOb1KL E⅘fI^;."[ɅXB !^O% (Р2X*(-ߋ煉aФKo:"Voe"V]-G+\5W0"l dr~PٗB*]4dm3D3 ? y BJiDXD-#`C6hBbKAH&6IE^7WKI;ʮ_;[T2h2(t7FCTxfj OͺUIؙc0K0`"Ұȝ4LE s%T-DƧyd;ߔ#dPzME֬HFo1ƗZ61i Md ~R#H%VQ传!4.Tbv"g= ZP2 dL9/Z&{i 8 ؍!oẁ3 BNBY SB K%y^ܖYFưtG!ǯC&?%a];. ̼ [UH)dC3 #x8Ryfe&@uC'K[WD@"q$U!*u2ZE8eHl㓢\O}aOAV^+ FńMa1$ rP'&H9m+K=4T0y˹_^ "1 HblmInna7풢GydI-$) TYQ+k| cM'5hжI^C12`I~)J:KTpI6L"J?JAS'7(&.-sOcy+WܙP`f81\kS t*Wj,5/ i8 4&GKQ?,5XV9V"?{ΨBJg̨?CR㻼9S%?qrԙ=8ŏ.g7#E` 8hG86,Lm)Αȯ8!Hʅ*ʚUۯK55:n#H;gl"W盫J Mb6̀J̯ {~g)8Gۄ}Qۖ@`bI|J]'&|{}gWazs Qs9F7g ԻzNcRs ,rn s89'mmd!\GZis!v b] n6k 2,M6|0E,R2ᴫGʲR]:(V<KTkuh`E#^ $)[9$u=QY$߿^TR2l$'8<tgzTՁIx"f]Rpj2rR3wz8l!.! c\,.y%|5O$4pRk;cٞ\q+l&7VN]Fa;jl7+r[ZK?OPZ4Md;Qg8d8yg/T{ԛ@G_wOU(6NZ`) y{k?{ 9+zA_:?Wǔ G&s{)BIO5)ǰX2&T퐣mpIj6w uSn0S{TģPiB%Nd3tY~(9Lfpq$-LP{@-23p\pBBF#1ޤr'xpBpT`t[9VI$$*hzNmWT} SR 5$:JMHX#sߤsFT8(5>ݾ %QR5 yw9 E$3 /y sV^"ɜ+sӚd3/5Jl6/&S /sL"{Ae$[";yV|Bz9LI*xgj$3.,c䎉e[' ][#eʦ*fỊBozGi*L?#<6Ԃ$ŤʭP-OF6 n&CU3M{dJ[2!=ydЉRF'@5t-QrDYwi# ˲9/ɹxLY*Kp Y>?مJ*T,:k|DՓXVn)mS~qa:$N{QӆUBDpex O,x ))T:RhX *@aQ L[+axFm=KvY.dq8B-Zvz_}ތ"rFvZ6lrCIR}2y[jEJ$ڔX{vxn^)0WHj0G~}(K̀TJ5 AeeS*St*Rr*U֪OI68t12ةXv BhEJn25SATswl ֙qwya  b TX})܁bͻU34eN #$ASFy}4(M%6O$J 4EPRI(U$2y( g/(V.)h>MJ0V$"{fIp/BhޥNv6I@/mJhVdJ7-{UEI0sum ܪ%%%l Sp –(6\f=E")P;Z=j̠%LV[@L)8L;zG |h!*ݛ0&۲,e6,50DY-(F53g61 EރEzNA"eJдDhalۀުq#, vI='6ÞC q+poS$zn%{[2T6R搖kj"hoJ0s&}VCn H_5HUig/pANW!A*d4[4""wo5M@]ii*[+ъqIʩLۦM*N <, _7ȫ<|2c+zʱVmZ0Ph۬ǜՌbn&SrX) 4 v)KC3d}^hZE9@J14T`ę`A(Nn[V9jiaN|M}!dU,?4Ky+TSCNwb߾xR 9K߅~s, qUO,#Rw_?6=]; K/Ue&o&z M ۋ:*U$tp(8e(2_e /3n\cE]חI| *h\۪ ?:Qo'JTn:CcY>O.Ki`a&#kJ\T@֫>d"b_pTG⨑R˭fq2 . |HО EpU n9) 6Pl9\2B)yl)檮I'rgnb7tGlf» F!fLX!ܒ&Lu`mM, 'MD穾<7U*{E7ϼ>2XVAtPKf݈tC[chuvhO~,tCɼlH`|Q*aʪCC6 s.c Ei41%7d{KA[K~<)oMWtTV}GSqdFzr' K]k3K[DDv?T=F G : ԙ[[6-T:5q#RԺUیlp`2ْIyUHvt.6ɝd|8k4Zv0闎Q}sSmbKA2TC\+: 9Uf;Vj$y6NKDCʖ\i 7nҺz !@ӔNvV2Fk7hG^VSvh lP+H4]e6XKcZhoϗԥR-qp{X\jR]%[nbs#kgKt&YK7D6ivlA2dtdSZt`w܎Zc[=W=V[Z[4ƦXg+kS4xç zQ|}q)M|'86uhC xS.F^:H+w(ѸBKk`[KD1*1ӳg/ؒϟCrsL;ǔ |z>qvs&ַe`n2l=ҋ=6WY qurVEb͚X[R,dq b"'H \>`? O ymL3U+bh]󞸄B!b.(.h#dsLqn{]F@DhM|Z5.˗UZΚb j LPv+'DDfVΝN WZNQMã_g"|v`?*ع] A+r69oe+mKTH5*rj/c[iS(K?0h#H3,U6!e#|y[IS˄CgCNٵJ8.!.>5C[$xtiU_y*TYcGS$p\ܳ\]hxtUPhJA#h)S/ar9ƣb9U7m7%mЏΞ|wsvZR$}3?{缷?;-R<b\?aZW":?9 %$W>*r;S`~.1 ՙZT4h3*4|eL. = MN]C f/툅(IƐHWfk9uhy[@?LG]s7`IKzv}Y,.=VJM(Ρy:~&h`݄6g'8a]BU|-VeeQ t)jt*\j+@ōK. ?UP1Ǐ+̑i5A&c*T.x~tK 3i^FQQFjsTsTb;5DJU<oD).ujPh չMEM@͹NHO.a'qX׌06HEGnI1*_.(~ޖ'+>E'hU񐃊;E[kp>woNcIzLqS(4)H,pu<w N aQAS9ys{&ِ=1)s sO#V9Os, RN*nNubʴ([7fYeCQ;CZduƼIfahS6! n_)OIX\1BJͮKų3no:8Ue!:"|;0&{$7 M98b^+P3A)LgS 3dC*9r; ,@X =a'R9:z0&$6s_'4:w)gOP vOh ܬ,DgJO΄t}$VYIiwD͹]CXJ\ny^qy:qQ a6aƂԝZ3cB@i:#ikDypg DsXcT|V@䬓?&1"*`ŸR3r dNuYG qhJln71l`֑%NQB# |͐æ 8.a^E߰?(Qd\?֛>a{6b0xc r#:=fuOͱ?O7Ln c;%s ?q9@.I(7Jlv"'n'iudTqLJת4v>F : a,fu0=QaXfQЈ錙i7QaC'1Q eKEI';tIoo^"Rnh@Xg? i?ںvZ GapP0G@Aq&CIx#GZ=ȏ &EY@hqlK-0re $:,^sP/;e7̫@zlE > Ex*G+Ƹ6ƨȌƁy)(@tA< OYH+f}j2Le@Pd%(2VeQ;{l^_GbN;r=znãg峾S}twyvǫ?\~۽~ջzPG,}z}{כ/v۫nnskIe^<}}̔~޹_=Q76l?}xn>\}׿v'߮᧻ݛϷWanܓ۫?o}>w\)ӿ;?.?w=lf~û?o.~޼e{KB7K[7O9:_i5߲Wo̫cҺ wS|uN#T-9.GST~޻vkgM\bn)ι?-}hptT)6;an'!ߐuSp_.9?Z~Ϸ/Ss ~a=~v}X'LN{~a+W}1esGWZOV֎y'ح5te=n:}tUoJ;i૜*6ۡBrvؙaq<'~q2ʻ =N~Nq4Ji# :/a&ٚ́.۶LݜY{[Z} !q.o7RK,yTQPi6QU<RsPYe;FVI 15ăt5@l<@ٲ {%zrdB'$4u5R`ȥsdycNa4H%p<) AiU/15''J۷tlQYח%6TL8? "ьUxp_%jظ F;[:KK^&lR|NəMֳa~2o9Q_.jqiM7I֤j\GqC՛oޟozuJ\{&Z;|21'V+^c;2B?o>}UzZOpNsǖ`~ #yRk (vĚ75ƨ> <· oaiisUdt[cT4Z+&Q# Jڿ7(zL[ JLnOa}mu 3 r.z!k"p}"z6ai} tnk:8[iπ@KhF8T@? g5AAE1%DKj89ת0x`!!XcnpWJL?} >@<6JKHGWD9N9cëRcԙ.vG֣7j\PQTFC/VabEP8u&H HPFRaH":nh[I )ǯ9gZI0jnaJJa|EҌAy={cw(2(ɞD}+–^|[Hjs%66=cs(`nʚpvزѲJA||# x0[,:憝ۗ oڊ\b!1[:m N6#WEQ{p:wl+0;<鐙/Ve]|^E1}_ߓu- -g *8X~# a31R;Z+:635GmtKT&;|C qU qX̩| .pcBz}"E}b}QKp6}#' Wg5?r1~E?_CWAMuU.H6lݡчyo#k5{y+ю 뭝p5vl C_T)o\UӚ$v3OgŽ [sn`ҝ[#Ż;=V[-`d[B 2=ӻtٰpZ6fXI GyNH8ǐ80ރ[MiYƑ!8 (gD4?-/&$І(:NÎ&RFR2l3;=cen_BVgt%j҉$fN7b2p}<yfQ3أ8g,AF '7IKq3R`drɚPvF֧&Ȟ2/k)[5czOuȲsY͎nl7cq;ǜ6+ޡQ7:M0=qu6ՎMތ$A5=1r섢= j洱v{ɘQ}S1QSa_7+, " ?s\)Iu~=^!Dl&8Y R(G>d<dz0̙yﹳb?KF5?(2h %Q [FAH6搣Tn&e-`!#xIey( 6YaCPǯρPbyϛOOvvDSs r3VGؽjC K.|Ъk̀MCa*σv?Dp{Lg*I4/.Tx/{z,icBVi5͊s%%p:}5;\`lt$nniIr6=]p{ڍX`E LdR*UXXcMA%K+- F,BD8H-(e^ٙԩqI AR {;YbXh V5uNJ+B)/q hRS5JLJ"2Iˑ:ۖJّ]ɌnYe-Cߓ 2) eҋ :\i>,K Q+/?­1)}m>HQsWٙ\dY1 T9mbS۴׋$/Ԧ)嫝ȗߵ̀>)rrR]:<B e!V&|7k^BjtITQ_¦Z ǒlQ B xMn똍Z:n{edtY+N>L{R+`I_ȽY#|mTA(/WӟN3uE-kAK+ʩv>ÕX~8)-'$=p= ,]{w5S{tk$܌߅ {ԬA:`dnm?Z z^M7 -%dqH9wJcv5JWR%3k!EYMbmT~qE׭Tb]>|.K<Ϧ>%Y]M2fk͚^-QUʸ5ħ55ږrm׋^t騕A5!MP~dM?Bg N7yo{]4|HnOQ/q\@Y[H\ D6n sOcOԓ -~_.983W~=AQv5Chgj:&=tvu)ef)R6O0..bQ_Y]3+i7Ԗ*}.|ؗ='pzfkѨ6څJr<%{7om۟bBx}~cۻ2fw,fgdPL g&5txm7tj]ۭ5\Sfym2&vhwtQQO42W5+57 i^$O/ӄ5]V߉ʐ$m֕='ZJ W'i4F05jfgf_V+\gZn%E )[qBݞa>ԩD(.~c ,VD,0*%ɕRɮ*5&koT V2ui;lEPzIP0OO[0}P[%ܭt8~_aŌCg O~/c8o_QNԼ}+tg,4gi(L(ce4wwj8ö睒вK[8Ɛ{%tzv [oعJG!4 Yj%swM ;c30{ۘ-%IФ?(u['ICmg-vBW*"\rqqX,VV֯xl7͹_UqvʭǬ_u:"UƁ }p"4twnnf8z bP'#ѱ\*^6;w |#@G:!aa>O1 ໕rej2~y,[֤~|pj`QAnRÎ+XasĸyoaGN t91<"p|/=CZt?/e|j"@r߈|M9Æ!=Js7`kti٫(>1||++mBa A& C@d ʃB!Iw`AIJ .@@URa+y (6\s߼Iz*(4W7}P6޻, @A[@D9 p+tl0e|[Z#JcO^n2apfNnAuf*kn#q7>XYǒ2CbPk520K-N+z( v%D*(/H6j|ycړa-\Y[9ⰇecLjr$|F"k(i',8"[H0©C|JC`/07ITJzfsD&!8FAF׸h΃@;$3i%,5 #@'L>aG0|'mXAmH·v2 ^J" $t=$̓aI2@@ס5HCq8>D$Ags^n"B}X*% /#t(b*j_XH'{NadF$h OVUo|X ot6@VF\ bTᑼ!PX7c ,\D9'3 #|^J A8qp0mcﴸiBI0yb!ʿc5$ gŴq QS'9'9=:ZVQ!0}ap B0˫%d5OTPr1>pGnH>2'&]?Fk(YGANU\>|草!:`;PA T1dQ'2 azʇW҄, ?2zBzJGU5:C?x7p:.0[0&Pxizܖ-_,>= qsMᶞN1x{zSq=m'dm_.)(;"m=am%^{^L2Oo[{; hZzիv!꣮&.%-$8tז r^*tZpp<RCt HFNm;=> ^m3sHm-]OVGCpH:+|scgݤKjRbЗmy/gpzo!.M'w Gy)f>l5DҶ+7<=9E8ǫBF%Ua,m[-]2\ 'q*z^3:R.0S6 kn|S3GNO>w۟~yx?_?~izy/o~λ=_~IO/m5៞>?><<‡||~/_=y_>~Op߶}~C& P@Kh6λlsch ]?QH!}ZQj'Z_`&%7^j" ~iG(&Aꛈ ^!^%ᯚlK @ĀV d-07Mt&(A~DZTNGۮc[D'9KWEMx6aMm=8+/h8G^c9%9:%}Id3%@")5j'I6:0GBso;;8&} 4),t$'~cFp}M;x& dJ &T^/%U؄,=p8JȪ < WA1җ'Z+,D'4!ߠ9%٣YN'P:- }|bESSQԚU2r3F}9 hjH,x/8#^4ؐ`ba[E! VD*׬!a JDyVCX!KQ粁"Gk jQʆ.81id0 U4rŽi)WX\XSReb (otUE F2.t]PJ].oLT2%@I=@Yԙ[/CV^Hɯ:-7l/uN W7YIdVny *_Թb٬#*TSCqp֛Ği6B{ 2KN+_nv!eՋ&c"ʢ ANfpBTZb; B*MOt (UxPЌC-n$΋tڮâI9hh\m (hV[+X?W^J,,1fJL?y.%Y12uF p +ZvXP(>BWJ.}*ζUFW*C@t8_CVŖ,T`+*ibe厲:EwtqCZCWD~*$#dLƬvApiL#^>L‰-FG%}mjEE8Įݣ݈U7΋.AHɫyDUa~F|$-r#&"+J l Ƌjvd6y. 1)kі-ONXU>ǒ:瘑ڤx|MsHE֏8˙bD&jױ` 7iCz/K##"tHe>YNE5ȑ5l?({\}D6]ڂׂPK pw+kδy}GUcHGDOOG,@@Evy`oz # "#DxF} ov,Zݺ}t>|훜pv(GSVYr]rT(S G4H+á}^\@EIU/;G%C8#nPF| T{/6J0 J+7U[|]㘞!Rñ9V"mK FOPt S-+vgPRVCʑﮇD*,滓-8@[ @l\H=P1К@ BB0@C8'&s{lM8YQ\07jRŔe7"ΨeZ!' 8 C$fFwϋ}B7.j,]{J2 ]ۋ !JI P H[ph*Gv3OA=o #91vx|lb1l!H!ds㻿 ?U87~c ~'g<~VA%~<~ݯ?~e>M9zd `˃#$#d_y+j-TlDClZ+ݻtTʀDK C@ϕ?_HEw`4E~n'P,(2CO׸Gðd6?$)T`4؃K2Tr2Т#U#Fp 8 nct1@]qE2g?%iRR¬(x>J(0RN;u*ab A"5j\QUS,gEk$B/xI`=a͍:-8,+4O &b$)"ZOr'x'(j@Q -Q20ɯ(9 XH!+bN[@&K<+D4| T) jrp]e};X׬3up6tl#Dz Ya1˒`B[( 67Æ*7.Эy`^l)vpLH B06 0{"̠ blJ3xfT1P0[&Q[{^$v<;v[lvY~^* %ENG-hUL'R66 /_Q QKPQ臒D rgߝfaCBvt{L&Y=\s~yqV>k sRi[CD8-Y`n9@`8IT]6o.#7)NetxY {pdl!+H.HEy5Ţq/WI<.'Qт(e,{r)|:ItKB,h+D#9@xN+0' t >urbGF IB"%2d8iv.e2Ag^j ]Vݴ|>I:Q6@R䄘+:y)In}u$jg_WEuRa_̠tDӣNVUφUƧJD *-0htRW }򮡯QQ! 2r\% AYcRȃKKu y a  7ǘ*;rXG5 bBb=/*K-Sːq)1m)P! `\"(p9nC,Z1N$C+b Y5-6ЏtUnQdL s+QyW8ǻuޘ *iCf;yE5i+u3Ns (f)+Ed須ۏ\1Tc;Ի䤥 hDdJԺh ѾN@5Î# Uof7$r5Qam/G(!uٟxTsjp͘hh #R0U-M T,n¸*E\)A_ȅېǪٳGzh\H:iMm -5-fo )S ~ nۙ|ʂ>i4AQCQ*?>Đ0mx0S/h"*RXGsP?0ZzDK%p-hRDK5ânllM  u}DJVمFJ,8xLu=n>Dm@EBxCXrf5M>$Z$o0k_x`c(! DL%E^$9ms'}Zo΢zנx)ӌ`4UCVI8 nARȡ0HZ=;l7P4 0u%q8uх.d;mUS5kw ^Do)i4={ ګ%Kpšh`|X U_j>xHs.N"=>4jZ?,j6Qt{YIǡb hex= wI!$ƸֽS!*8W0.HN>`DPCwUl5vcy;Z&馣 oUZ=?hI Kv k((znb35tbϾ_>퍠vLoeu:;H0xpP = dCbe%vo6ӝЏG[|v(k4s?:VYA׸N(h* BimcŪ2*Mx,vo рk̰ө"8U]7j,CؔjCH '8ouUDNyTY)V53(VZYj.깙īGqSbMGN{XFˡITJn\ržDN9uGNنC9Iæ=qIn޻I6O;w!`Bv/p: 5De9XEKi)j h:xTa`al]ةNC8 ٧ _05C)":v%څ}<CzYX%Ocs& F0Sv-sd/X`I%aU2EV9 "b%:4CO"R)%R Tb_:gd'I]Q^׫z`%KD4lK9' {QPSɹ9UуY.\-ksDni}g}ga^xaLj]J,tDzy8!+-qf@!~oE/V#Pҁ"WKArn=O&Զs NlAvɨ352u/ nf{aL3i&P*'^*ȿ9rG-AB]HC,w]8k^PѾ^6u l8zÖNz?Z:+]聘@oHQJ 9Kp8Dݝ&A'{8oouixy\};2l>,"E XHqSI:yk\2Kx!5AW6Kft 8vq9"ۄ2g1,rTk 0.sqtrlPI#dDžE5y1j CʲQqEVROO}Hŋ(' c QYM9H}dGf$y3??%#;.")%a mYW'W3 T_:Q(@h r$ $:<&eeً;`v'GDhd_LؒjC}7WlIQꁿ36HiPj@9Hǁ-!i܀}+j7m`Qegnsn]Ro|X޶O-)^!-*Ս-ֻ¹@}mSMظn Bve "tVSe;wbgV+ *CGd(vbe@&!մ'+>;O9ZrlԞ!_ʤiwxJ YmzǴq%\jg(9b4mdYvV#Rv:|%\2@r 3ݺ]n6s9-'^1!Z23UV}h^> zgē20@mDtI3.k )T֊@P )lxcJ=3/- Nfhi6>|xc`7UA^fAMTaHp6Aɔ0?{'S4}r` A j` |x~~ÛW߽ >y` R ^=0@{kK9?3Uo?_ͷz#Wlڢ>z8BZ"b$)b?``d3fox"G/d2C SD#>r T e8OqÝxuCcf#PqADTu#@L_YA\tty y]1bsi]wq`xV@CmC^˻R GDNJI\|Tq*#%.܍?rVMq3oj4 EC U)—Rp! lPi;!?:ka0r5ZM3cX!?/q߇BnQSm#x&]"Ab0qBծ'3.Z6 7˶Oh'2zxeXBќc7Ǚ-m/|P'R3A(f^Xi.:=>rE5ǣII@.: CJ8, 10. Hn$rn5q N[ KbB,>rTEJYqB|BʚwӞ8[j%nDm-V铭֡]"M/&s^DXSIF^|Ietqz#!ixXqCfh ׽S gX0: ڋAQ =k؟\AkXv6^pb&ǼN=Phꎅ7.и,vYn7&Ԉ=BBvPQNwyP"+$=ra7Нʮ<л2#Aa_MBAk\/>[gy5bof0O(l!dt{ݷ`5+X:+[S,,r p@!Bg,jd$H[$$`,I>? B(塻 1; YPi1Y'G6pʫl1@wK؝a51Qd/>kі,G¡)Vp$43p 5o$VB&%*d8d Mr+!lk,[_$+>-U3LhNe .c4jOqU^RǠiػ~қc% 6.ĪJM^݋~fp,0,:2+GMIu*XzgwSrP N,Gj|DFvP&G_UP$zcUP4ܸSo7,/uQqtT‡ȱ;t8],quL,R/Ѣh8ͤ!A|w7䰳sHiƚ;,.? )/%B(?>߄v$O?>eVDPmQs< 贠s8t-XlMʋ/>Ȓ=gw2Cm!)r4o͏Ε1l1'*Jwv89&S꺔hQB*p8Y$2բ'qNM?j)q-+qm u,^']F^w":NPJMroN ) m_0K ބBZ(e=VϢCRtmfL0$ݭYYL$K?OI#~\I _naNTIx&^5la%6q/!m$5J 'VdV[~6Uv>'5\C <|^Fq/PPzRpz9mk9v,V^iZ[Pn{{V< af)욪5Eΐ%GVCo]G:$=ou*+64! ^$ֆ½JuP?؀ے#a/{t)1:h<4}Tno,rMТe_"h`asٗ6$ygk>Hs0; L(qqjCcV6}ӭcPFQpnK[w YZKΪ׎vlu_a04r~%I*^~MM.$%P֞r*E_,Ȭ0jͤď {!0N4iMU30%uhy+=;M #0:ׯ_ܡA1jzoŒ=i.@8z,Z eV3D0ҶdoawΧW0T.k eEZ7;X9*.!/x-LmBb>&E2^%Zm9,f: PVS1UD4G}Xzk: 2$>;jz꜃Ifȕ'a?d0o3-Sς+y3֞B\B{! ǺPquwu ~9 H۲`7Kfnwς GIiPdfxA9׿+e] /Ūtr3a\R AIGkp5]$iw PK8n/q[~F; ^[7n8Tmе:znz޻<4[A[7ц鸠ЎWr3N>v2Lr+Ŵe#֟M/:% R%9PqZi1Წ48YA$!mʅ 0{nXP41[>C#'rF[)hu\{7/y^ b 'X@ROOhXCSOÿknVM3e5R>A}<'[BQzU/a ~GTd/qN3}2&PrF h2 g`2s|@^ yfiAGcW;k,"pOpwn>~<1t)#M@h xPnR ߜLnXr\X|VیDL,@IFFt #2rkeʪ% |]P1]BPc6}KjH-:l;(" Q; @t8*BU4=ohk8`O Q J` DJH̵:uVMx)dEW% !OSGG:O!{Ը+(ZJ)%)2&ʓT8¹] ϒʕPޓ 2LM ɱ{fkPD&2rMq׮J$o%o(jo>1ʈnwb U(x -‚Ʌ]O*[ƌĹة̖\lD F &l|*Y644`-`% z*1CEpr&h^y8LI ptv9{1+ɾ}L,ssL'NA9wGM"Q2H4HFeo #\l. <&p첀z܍/;E]QF:+7d(e!z;d B=(ъ>5pV eqRON3M2| }apIwaom?v4 _ƹ{qt7ycz G+8#Cj׺:zȐ,HYY,+FnLŪ@f$m6Kp) ^ Pz6lVe4r܃gl9 Wg) Ex 2֋۵&+&1 2 as_C %j:/7pS}Z\w7+AۡT _H0*ܧoL"H X{~tT>iR`g?akfa}CKgf(+H'*[LjGUDˤs6Pxy{(TA5QiX5 ܲ `!@Rn%9eـ"ȣqrYeGX0.XЩ=rwC pV-Dҗ){hei!ErLmT" _*yE2GPTE4nt`pѶVH.Ųq T&o@+#]-p d&eד6kI:LU qf+#!ŀ{.ϠL. }eoEOhw}\Xas<9ŝB׳ujQ'tG h= :Otҟwm'7}cPt? GV><>[ߞVc~{cK6#ڪp}wK2j=m`w1?&w+sx+Bίc1|+(|㷟#swB.sչ FQAm7Hhj:f?k̠^hc#%cneSgcH?|#;}DM Ǭxcnf&oC r"7;lH/? ޡ7_J!/#Qo|Û_^w~~?・O;D PЕװ4:'ߗ7y]Nu- C.7>66b-H i)j;εɝSS؀Ma+eϧ9kV@Kd{6ΖpyqhqWtь_ٟ 0vlf)BQy3tTB"' B^;#0_.JXɵ6$N/a|ߛ4u'En3'FA0c<9=9BP8!`}nl ϑGLk7!m;l?5YuCݳg;4`Yu_N{E0p?;<87sj)Hfa$!s< 1 a*&b05^|zՃz7% x~{0,epsNYꤵyr2l`gS,0&t q!qhʟ0ی'|,';+SĈƾjY:-1D{(f0aCٕ(}]?aܤ'#Ga;V%K9t6?7Åv~ ӱP{y1-#Qyt˝,K(͠҉x T vpfN4Cii㿖yзq357;Py8Z?8A_L/p>zjK0K0 )!ZUO#]}"'n,v,be Af`IFT]0C`-9*)2-m-yrO5'쉆sC-CE;S=>3ܢD`OΈv1Pnt`ǓIu4A( )zLsJbd!άⴭr,Ɏß"=CIs{GqC ɫ,3U%NvQZqdx2bp ̦}Xn dHIn5/:f(0pcAh0dPw*s7_f!m$V|3̛MNw8f1E ꋸ(iP&!Oً! Ȓ.)eg/g/pxohw;MƍlVb-<XKeC;!?~m8Gߖi0xP/dGhJ=bß}« 3 _t4ɔ1 quh$<~]?Өt" y(潥bo5V/ddy[TBgEp)z'p2-Mلg3hP{4DlQ ۙFSWR 5M}|UI:f~Uy٬a=օ@XxKu Læcߨ&͵yR!͎2tnyY_@R)yeƝz鲔 C:]D.\?L0/P< `|v2W |}s^3,s?_^?~<_zwMno^7]]CqEaQ\_8_N%yCׯy|W̷y%m?܏"7ߌpb]^]W:'?þu)\ Ϸuw9foj|x֥?=M:gQ/W<_Wrg}~U)v_^f`|?r. ǬG侂*-~յw/]Z P 9߶u}:|+Fs_׎1h <JYP)Q6#g]^ʖ\'?|eeQ#Yqa[Pca*77+[-s` ,ƹO|e/0[E2S^}`Grƍ,Iw Gdܔu0pٙ3j5\9y 6dơ{]Ikg'r%13*iL;֪(+A^ :ܯ ouG VX<P pk`ׂ:TkXe)qPj}Iw%b &A80+GN%Rf2sɁU=Cpu:[wūiET6uek6٬Dbm?Lahq;|Vk:l*RVc &Q=eAUBy%pt)Tښ٣Jqg5 et{GTTU bxr/;,F F ~m`uYaɸ#l}V努a-:¡^$sV=FI*u^?Y4<Ē<sP9AeG ʀVaBqQe²#)^ZD)'a.Hz𵹞uO׿xoߞ}]LOW #WWOz޽>w5|zw|mwo{w!>_/^mg~ϗ77?W?o믮/~/ﯯ^e~_~́D`D1(HO ӻD ] qi.t MRBPKH/Kx9]%wg|WWŵnsMwt=$@ѕlw2@i~w_ő*]r蛌K圉-2X4)YMA vᄍrv8^7+@l.& lP/un_@Ex5io,x{z0֗%>[ycXO |פ+K~s P]i GqN9 \O"+R?547{;u](}ŅLEf:BlS~Y]T .о ht.֕gƹA1'߯oX*c>"w _N>]x7IMZ_ :S[*ޱD^6` 24pB +Bp-aa|@]Zz&#Dږ'ږ'r 3ˬNe_k.95@Y%Jf 2Q}1_|:݃(8 6/CBiu4 i sa-CGez}WȈ]p!Q0x$D )8"{Q O!Lʈ|J+&A并fo?BL0qkUx Y=`f)EPRi,7)~bLgW8iu$>bR{G~dPJz#խ\"8SŸy}8aԻ#;ܲ}T2>pjs֧`؏+!ʻgO/{WHݻpBn b'P͗mV]cV$כ *W'q!;o!vTt3_p;L0< Ep2>5Wdmb}9xش]-6[ ž(a^G'  S[{._-Nl,>qT{@GD2mbcyV hnDIwΚq*{{!r\eR4Ag4Ft ,iy2ý7]9$gةzl??:yCmٱS|c=Y<#σd:9:=q&p[yvy3}{Ͽ~Jw^5?V~bgo[!{_-V,+Bb+{HJu ?ሇQv1™<)pͱ怣PȀzX閬5f`Q|؋"Ù=ć#23!8J-ƴ[jm8A$O$,aQXugb D_h)mMxZ';eco_D~ʼn'޹='?t9wh~;I>Fy$DZ]Rϕ(h>=w” 'Z8ȴ8 yjHdC+9+CZGGgڽ%!C. ւ#qЂ=~!kWzeo>{,?] :u3>2,ro.,?Җ PO7#tp uSW*K;xIVIkc3 ]xrWV? K5򍈴f9ik ^R_^@|@ Vvh՝ Қ9] d|bkKz7됴%P*ġUN7[hs+Ȭxa:{A}Ïn _{f;'G~%P7x}]0^$aMܥd( H^j!<31)eѪ`ò#\ {UsOM*/,KFr=@rՂdA@pqh[r UYT8Q!! GAZ^!fx'Cb1(MƋZ*B#oi)WV?I1s{uAVTq.]PF8,mie1`PS9RKA[EY g!t &Sy^\D7[c.0YVrĮq+K:F}$k='MHT}3{[:Q2KJN"Z ҵ%sjoSԕd`iAn2ϱ',?iyYȄ3 JC04S$>McHXcǞ6Ce%9(FD,(T{xPOqs\͊&A:M]4vk%^p 0144:+q4bu ܉홙׆6)`Hm2UL'1s6mWLQM Evc+%q}ch&#HwxԾoc`[!oGT₍x(R}2NSP4='q fa|4ftO( eaŞB,0O0hllnHR ҪnHKMVp䆫Da6.5HnW&M>q gKTIA9Gx.KɐgIxA8Kdž2]6Eai;˗_?/Fa &q?_.7߃ @{+^s;8 dZ]GNO9.>W{o›/췯cO ߥ=B2! ?q,=rcĈD2T w@R& .UlٸejtNߝst2'R<,tx@al}(^GZ.txɹE\#DM@$`bO]ƌ XA8c?W/1 BSek} )BB#i0mQj*wh" *:&qAk`sd.¾3Rߏ<%/}J}7Ď`4K7Ll\8UDÚT/.UDU0_\Bu v\b ϳs6$x<'sqJUrҦlw^JDK_td ,^& '( xLS! wݭ C$bKPS ?ܲ &y ܌UH"|LZު<5"GTVI08X T>.և[B8]OxR /#šމ2 !/bU )eT%>muV46 lJ}l0 |wa8\|Y-FylWǷ}x<}#0#|fF4ʫu=K[4oL0%I""5ǪۮUpd~fM $<䦅.8v @W9 $xe C%lXMyGD Lx]% +AUl )ub= r0ݓg j]g4'Αk0M/=+fraD݊Q+d1U&$B*:F,U0LM5 oW[y#Mh%i%;3C&kF{(4Q ,$h^Z4!O[ͺu=k#8@DJ!ɫ鄴pW:̰4xfǗXtqdH?8DS,Ŵ []r.̡˾66k$g^,^f"m,]cbKD:F3#ArU6a3fLxb/4~k!D揲;8j s=]Kxs%: mLbaKԚf`7phzomboaAExmSħ% d=$R%S0䵢1ىG!GNŜ' [Z$ WTg@]9e&G60+߰t0f*yVdCfKo~(eѼ["ĭX$' rinTʥos-W mz#$C2Q kr«fq*QQ ssNFauOIg5cYNzAKhr!h"zrdK#qSy/S#Qa|=~ 2~e`4as?iKK ;oJRꚸ=߇S FN]BYKϯL@䷚͔.&6;J8;sMwiW/sexr4<.cC|K|/((J/^BAw99*(J^B ^~|>0Wp57|{/M6nq&*}E&eۣUVf-CD+v#AJƪ/p ED7ݱp Nz\wiM@?1Ca~s/CG֠-Ϝ\HH͖$70O<"Lo 3l*O\\!s-!ؽ-KH ,b񈆚| lƺS8=*n%p/&rF1HqhMHY[o[Dg8TD1[Q6QNk&,鋰"DHT rBI8:fa@!4^=S驀Hq˄c_<7;$.v>ra Z򶣰Us / 7:uS$6 DUQW!GZ|"!ĸ]7YNaY^X Hcy`B84<ՔM.q=5u {6o҇YkPvpqH(;O)WN<(Hp,+Z4+n y8\)3&Yb*E'F,h~xf "&+JqKX(LE)n5BcmG0d1Id(&D o7.@z[uiYV]PiF$ìCm.ͧEYQ1b;)Vāqai%D:j1|"y!hӈ("Vٷ-/ϣZgտ}#";8Gd ,8T= uh@]pak*X 5BXlo4Y[L/vX(^@V‘L QM=6J Qe&$&{'ϳk`6[˿p<"gV7sJBY?*$u}ۃ$p?oY/]{.桖AB{u 9F_cvЋ+]f Z{m욾^$mІas=,eC)@,bQ[] Ft?V4+^E3aaGEXVL\$ е|^*/Yb5.0fJVnִmb q 8.V,gCO`Ii<? Y/K"~Lum{@o 1^ V.ٌ]7GxpMB@NhALTZ; `.5<7 .Μ0#Qyo9y'eZǁ>L͈Y|k+|3ڍXOh[#ĺmwz j_i2q[4H1n@is"T kXE8j"S)CRXYuҰj!v<16{Tx-MfZ*I V᧜p/.pQ Cq!%<&JٴWoH\7-rYy9K3=rj񨓗c-Uy6~Ǖe?g-M0 8wC.OewAFRK Lt8km'%T).6nsH`χfϕXϸ:,z hrW?REp)͢+dikl%gI^NazJ'-4ܢr0q|gyb7oj{Gz|l]`8 `.kۋoۭ1kcpfv"go0v kwu@,hѨIR>t5KXq,3lBU&LLy^%ќ)`B$'(k&"t5q'Pݍʱn3 =`41詡K @7cz_4)s <?U%/pC[4>Jjq9['ڗڟ\K#=!u-X$`**3p|PXfqzTh&\y8KUȈC#8s2%coTf?Hx[x1BNUG!7VA|=@U#׽GGfjPgM#L@E.RɪdT R V6D6 oF+ L91Ow_RU&x^ t0hK|t*Ha͉HՑD"R>q8ȁ`f+ݘ-EqJ|\$r>9~N W ʭ"Vi7sLP>yPVFd`Y ͭ/ixy .gfS(E>m+*mU aBjYPoX(M. 3Ub誢J1jQ9N0iӪvA$7 ڻ IZMe,~f4kft]2Ze;fYұi`Pg\T7%<[,%΂<7,̣uF?̀9NT+T"~j %P'o[qvDs{'ZEc!Vki:#]k\F2W+ͭNK!=<`K.j籼mǃ,wCCruߛ܍J-2p7|^n7,o) 2q\=Y.aNl>p * 'Њ.pԈΥ!"FB_=e^#پۦ?}맿]o{|O߈o~/8uz2?unvn)6H{)±.[S]쎔$@ķK(fө g9j6/Zl[qCs ;87%8Uri#TBri94.rjwk^uIݍ0*剩B!mT gWKthօRA1{갋= (DR\ ŚYDenü) ;{}44pNGgЁ K6XmaynJ'i#)-xƻ9lYBXz8~~tRyI9_htPVIK#R>RL3Q}wt\ߨ *΂v>q*dT6Ȋb}#Z itp$/5Ƃ%Yik<skH1@%n0}>f:,R2)U|W5!ѕ槂 6?"kM 8b˼%9y؍.ORGC|jȺ U[JԶ#g dQ3V!{PE B"$ff8u!DqtB;i#JVPnLQ[7WrKz35QNO+JcijS,Q1~6ml}b6:;-ÀOgc6>M¡fPtw9rE2חm^ TiSi҃Qh*HjШQԗ)Hr1^XȦ%9Fn3%8H]KRXx:R{1-)V v[n9˪.s.$TU*, 6j,{n#k(^W'B(ݖ' Q@/+ 8Lz+ wtDnxr΋]\_ɣ)ex<7“r[PCvHN@Vj=eBJ vh;Ϡ/^Nt1 (C΀!n͔u{rn|#9HTw1rȉ騠%tx\> yݼNm_ܜEqFIj^|BjT9bߑfPv<o3/t.!.1c+gƋw|;$,4bQ0s/#d(EAΘ 1F:#nQv:6¾X-=_`I")kmⷛqAP7<@A?G>[p' `(&dy(vת\9ӣ:LO;T {IIH}s&cL,aԉUݦ2aRml)8Go Q4euyuaɄ:̼v*wrVdu$b &{uZuaÏ_o''W]kqԓhyAU5E q<'0YܾqH@LMH> u_ԑػPG}Y,YQ_~B,|̎ز{&xMX4HP~vN**ڇ~Pi9E)R 4rؿчE~;e6?΋h[ګ0s"`6ׇ4eDp"sd#;cD҉ leJze\^@%'9ZPL\dJ' YnmǹJI͜NO|fQ0 C-YSN.*xAN1~VSH,=gbR||ʉr|F|QߊӸ 3 tֈ t)^{~li:ȫRJJ,Jk²gےF楮_ٞ~-ϊI2^}K- v̔V/eg}RW_q 7>3kxܜIk>뙝Ot=-JW_o߿U2ӳnܟon~˯8[j{??~{xw?|zo^yͫ7 wwBY?㗿r룛'f?NYLJGo/8 <?O?Ǘӻr>?u|w?=) Ջ7o^uݧ}>}w盿|͛o_7u[߸_ߺo?}&PDy0 NIG},Ξϫ'1O@b :3Vgsq^+Ǖe~ \(iqiLxϖ0u}Rn$/Uj'#ŕ3斾/A9$э$ItVy 9f,ֳ'iyB7F`nP=K8;*.׺IiXmɘ΃KΫ8 dX4D2"9%=_e d@^uk >)Z&>y<>/iGCLt\g',\2yTy"|*J4]C$xII++6=J~D1`l5SpERV|ƉHʱ  '9 \g7}Us?ogw"|^!bgB><1rfOw~{ݯem:!/_Tg3|Z|E9r8%'q*y$Mk$يDWҺXM$^'q=^+K ~\KDSdŞ%sH&n:Uw kW[@ɓ&N,j`tq u?LV1k29e#)GI5$_r;qv}$"!Q%VXR %FEyl΢)u&ӤK$:87E4oPxYM 8%0*OE\4"IR9\N`+59C6ʑ,HPΩ+3F(=K̤]E ?t"׀SQ䤪mDN[XYF`Nt dC\)I+ pIY:R/ŴfsVy>ov$@2lX<䉍( Js\YTQCpgΛI*MB"gpizVܓknsH?ry5T0(ͨC6b4-)ƩMG;>*dw@ЦcJh0UL <OyOy$Hk,8|F2jzgȈT5h M*hc2o (}lyyf)-<6!'"S3ejV\~ҎhG0 ohGc0ڒGhح@O$f1nB)K[}VڙAϽX )^ ޞUuD7ÁF9~ĤL /6NBDH0x0r?.GWlJia%J8 Dx{j1>Bc>\ 4<Iݜٲ''Ƶ&dxbR[b0L&%$Gۍv4+ 1!{ߚ5T9~ PQ?W^VRc h8Z!\)$*lc֎]lr86/tg+:!ԱU{ i c'c!C!|ǔsJG3XSX)bhC&,28:(dm ^H"~R5q,Y d *b2#nrk|=.9['x,Q蓕=C(LU˥ GXpD{Ui 9e3B  Z LH6RIVBF`ٝ8@,kۗ66eMu_ڿsP]1[!#We!㴗#/lՂ2 [y=KD' 脭TѠ=U88ހr#'0pCjбe{PO`N\]"rv=gi$3H;b ] cmPE`FBCBAXuI 2v=;&0,$ !b2dC iڶ3?L/69V7!XU[ܥWBhh7Ujj,3i0f,5о$*ɩ Q HnټXy%;&5uUѥ]>c{+]j+4NPe F !˺sY^ ^+o-\lջ2dh06 CeUj!My*l(sF|u>"*P w!fhSvt{ZgcC/l6#ggj]\9&sH"%iLk>N t0%t6}?X0utB0á ׯoJl0-C?a ?U?|Wek0pfXѶKa ^gsVg i_n0rQ*Vw%,gu !9݌/xK$"V!_ s|QoyVE||4 zR<`.T/BnrP}P'1k2Mj^A)pӥPJ$HB"ZlpURs)F'EpI4ЊkV`hY Ə/R-H;˸M1S 8퐮s;ϑl<'PZ.usR9D:eaLwV([8J$ QUBRXr c2^o˒=`:fz)|‚-XTG5HLYyԔyn1m~,a!<0ifa *2{$8ΘwvifΠJ5Ld{-M˷%iy;@% f#˟z((XY(ʖB΀-)ŋhRlAC5T&Xv3VE[&Ek[<6\GtrJq> k e93?,^x)h]F&_>6E!":3= Ly|usB>Yv]c!um5%790խ}Jyjv+T.;"{]"OzՀ2ͽ c >S](7}o~"Ou OdgՋd\EF2ܾsz|>A܂GrɨrEd}D𒖸t&â)d25g"S##:E& \eX/Hho6I/Uq`` Q4rFtTӑH*>.}90D]d 5LξU :׍X)1:i#UiхRQm "2u$^/,98cP]l[U:¶1I*B-Pz]$7/)coK5D5ih#q+XG4IYz ٺ!*/>[<.X.GzN~^$0zu=5˲qBNP/u=ȸ'龠EG1v W˽$SMR'g,"^dWihWH}R|eu< lMUU7Ѭվ }-Zq[GZqʫ,Z|>rx?ZId_jctͱרz8-۳nNJ9ou E~Ɂr_'7f?g__NvW㺪uJc [3!QD "Mۙ\'fGT QLU gHoV!`MA8Ni-$U¾hs:\#( ! ~?.#{>$&O"J˖^8R{z&6U%knH<^+dPx: ʹ8D'=? Yim~tBkMfu(ҾqP>(SI2"}p'9i4V<ֻfկm_!WkGg_w6O5[У%|̑0lqR ]>m <*if]ﭲZI+.|0~0d6ä1M\,(Go>}QU>S,4!,+ L䅆a<$,qq)*|\̾}gVe]+B,, pJEJPNJ2CTbt!8{ fOu@7N-h(c Lf6W'2C5YR%_Uzd:84ܘ睋J⢏xeECsMUrsBv$pB5ycK4SE)(TJU@*%L1qu]J *fxdپ%}@04Cnf1fM}B[[KD34Ct~ʄ.*5$>NR)2L $$_@`]!*Ba犊e;XED> 5DEB7DP鋐|*]_tl3ܟg2D^qTUY/QEUe~;C}XRY^tS$Z;al+T*$ȕ(=DӍKL3RSAw庻D,Cn&'wiD2mi_ASo2p'aDՉ-MECC0U۸jEªMLTNG(xhߘ_ vBې6@Yb:*F Lj%Jr [BT.Cz@ofe3)|фGE)Pąn3 Rc-%)r9#μt$("A^])|:̓-WKL.uLхG%?h#0G1TJ\-X$]QW 9hj@4 ~ҖEqRR}ps4Ïؓ$όD_>'/mui ZξN׽m2OBm5i7h!N?W_@V3d0S^uiO3"-fGs|>Ad07sٲ__j KDgt>LC6ndd"ms+\j<]YMn68vΈTZǧUWO5TNs >yuj*_g "o0Z X+$aG.aiS ,XZWivzE=LwBv`6:ʭ7jӲ=nZ|h()Sg6"32=;rEԲ >hV\dfbf Dn75!+AL!tǧ?rݧz{\W>?>=?~/>4J3ӷ?앒!z kSilT7ƛ$#Yt>W _bK5Wc"VR=wL4>qD;f 3 V>ľ{2*tÐa0&hdrMvM!m4=msB!U9XDhchh,5;^փ4{(~ٶN 8fש`"K#GY' .ZEcX} yD&pe7t'#fb'ɼ޸KfT2UhiBN*ѳwQC3 &O\M]R1yomH1FRQL@=tueUh8.ZgZ2>͸Cv|ϣ;NKGƗٺC=y5vjDq,HE0hX#V]Sz4mQE` (G zg6|w17~\ݰ@뜅=B=͐7 ns\˫)$*yI阅#TBۙ6621ϔIz;g߱p߾xn>ͧwon7/^Vb|o˧7u&~|wڳlk' bzSo1b_.Ϟ_ov>_|y/'no˧n;0_^>}p>߽oϮwewg.]{wǯ~>ڽ Oo[-%tI}@3jyxXXrÒLg7*>95p#eg ̋Thl`;Inj1cdklɬgY&q4mglkv? -1΢}љ O]smg}ܤa\YHY4Xۍƻ܎@aҎZ\TlG!bq4Ynda2Q'׈{]ItذsDEeǦ1:20:FT%W3궵s9H5 @:_dCz+J(VH(qGj_7Z%H|`VmU#H}б<j֋-c75FmѶ2wM$t Qt ܮvp6ڮ $}l$SQl^| -idPYhPiiZ#%P*D__M x4j/0Hܐ2kQ&wU3[DI11hpCYm2A]gQ]JI H&=,V_sncfSIBV`R5UM~AD歿?V;/Oe2ؔ5cbt3s0'GMC˶d$NRbԁzaqMVfFƩ!$(&K gWWyS뻞Acp|混B@"Gί/Ofу_?v/?}\~PY~bf_<ϯ^܈toM#7 LJqa<1L l´;'˱q+g^\B L=YˈgFѕ0nS Mû4Ӂ 9Š[|ʒỦL~Ux[N c(#8mNӿ" WOY6Y2-٩M4DT"{DyrU %(1vX0Yt2!n-ew"i#\x&ƹDA<)Tx#N"e([-Οc[[>cfnGƮqk{Vm ]>RGdO=^.ӊ(3EoaٱCF=_\;P-LPaLT>UOc 2?Zxq1 עL0VEHrd/Yam:e`(*@W ܂PAtx`ݘG$ Pɳ\_e@"9Lnw ұ|(]6EfN`nbV)#NGnCx̪"zxYx:g ;&{F 1੼NpZ\K.ˢ LF ɩ+nBͲw iMX_]肗,`gdg,+d ~K3p\+q$`R^x 'x*ڰ@&l8+l']ͣ3ff dȨGe1u3%| "71[]^5@Dv)bc>@#33tbd)BhtH?.+T);Z8blyE~6C)p@z_qlC%M{qZQdO 3 Lq,`ꉪbDNHZ' BMaB,hyi17"eEp59,) JGMP@K5 GY LJ"Cױ"CgNJx iN JҫXR_Ԭc: VՐdQ |^ymbC4h1m8;Z'茲V(nHL&5~/HMTn*=V oo)jO%XӦjˊWzOT!dc[hjV5R)y>5<+\Y&fA43E7!FŪn2D&>ݥ1OBC;*dUՁgim9([IO&ӵ+A+kR EBNQ胓\ NtC%?%TP{__t23!%fUE&Ț(\^ͱ'=S(اIfȴu+:~Y閺 HFp7R=M24ZO#+W1 Z({#2DGL9:bfW[(sё>0%߿= S}؏ӅG&<(Ѷlo6 *v8)" R5:֖ۏiu{S\~\NӏlSX1e,u 60O'%< lk1amcQ$nÚ@7;CB/nH$څa3Ѥ{cL`jÀ09P}ĀzL4vhvIHOpX`5Y/CaQ!7F8# 8a®Ng8S~*Npe8H'q!?^c6NX x`g#IZ;X2tlRPę,쌟"c=' ItqoXzA:|1c"0F,om^b]G pQԳR^pPF @RД;U^{ &"Q*vJXsU[P}3eYv̮L13I~c(E8Jg3uR;)8*hS`e! WYɳb}IԽ ".֕Q^j=2Sy (4㑚U䌩{UڟzAX1=P£n0XqY6s4+9-M @(D">N|Kycs9Kr v'4 מ0x)'e!,,xgDd(?=2urj$:pX+.UTOђ'f"$cA'{d R)ɘ*q d&AAɈS4D`BؖZG5#D,?+p?,h+?RE{Ƚɽ͖|bIj?@SS`> }y90]SW3m--`sR^ ev&eDlz pZV2kDPгVݹWhЋFN^)-.LD~&!4[szz3bxm3u ?r1 N~1<. 7-:.n֒%jd1&܄֋{f -Z)6ZȑXpZ3l5:Fo{ -gÎlO[ΚZg<mݭ7OE]2¬3t $xi/1/)?I+f p矶j n͙؊P}Uh8q&qBL}eqK`yd%9&v cs߇&{vhc>an/Lҁ d9-P-OTeCr*lipq"˜3LDASјvmeU!,K`Casj )58iXsHΦV ^$_,$ėQ& cH =1[?lWgIqF ]3|DU?-B.=(k|'WmKC~_%ƤZ_yzPQѽfdqx!)lK%m7fL7@GLS%NL($n P SxYyAiI>(ۅZy|FĨ̭!=+D  )E7 \XBHj=ޛ<9"=fP_Ὡ~R(GPPPW†\p?$4, vP7b4EPWukPH3~JD<(n]Febό6Xsk1ٮA\Qu!7@?]zc%(WѠܚkp~i[[@&zEGU1ǣx&JECo[8)Yezk5z+2ݡXnj$WV#:[F{SdC p"%n4C\Unʷ"{pful1LEO혂,,/*& M@F>A R:0,롮2WzwI~f X!hVѐZR;v\#*= `m+Z]3 {m  خvTP -q XV3÷AųQ$!{V V]aN.·ߟUU[W'M ߮]%2gdJMPJ6_)|6נ첩b"?tN.1 LzAKF sc82rIn= ';NTĆn[2} S#[hJ-Ȉ[ii v) q[9+b Mΐ-"tRbƙu`<Xt87\~ ->|;oZ"|nioioIشo*4ln[!fxU1\3pM'1-}p鬿 }*D{>!e8W/¹pW#؜Ǟ~'{y?dmYok˝$(ij 85-p»Oavuw[S; |?1bcnvtM{mK),%@yHm(19[E`l05^؉Gݚ큽*[R"^A/`w)Daݚ]W=K3yp`Z"| nܲ}J<|,I uDm.nM*PR-`Xe'2d[裸O܄gjͺlBb&Em#҇gэ#c!T|P64;)`E7miP5\㧃+oCj:AYrܸ)`&ׄ1"`[ 8NL"_MnMk䴛#' Be9%mN}$ !ON7df ^wvv53-h;V>ZvOlkpn363蘻%՞]]W^Cv`_?v()~(  #Ц+BksJQO[˥IluilPZnvݪm 싥x9κJcsfmmAIڇgg'̬F8@̳6 jG#46 q~9ܒU]Nc qBv8J)^ <\V9ϱfIի*xVLG9HVܖPM@C$i!"\J51=^`"[v4cQSFb^&bK!&i,BYd9r:>cbmgF[}\'#l2rKmkקʴMl!DzwmmP Kݮ9dʖ>e7նڅj[n, ,srXDP(u>m/BC][o7~>Oqy'ZY/uv#QpdCrUKwfְ))Yۺ̨9lXUKz+u^[;u]9ǫFru>`W/1 kgoW?>^_~ݿߟ~P\B(k_?^|},ry5{?wL ~G%%\ߞIi+I?~o7^~t^߇wo/\~|ut׏fKryu.H@V޼\|=89[KzߧWNZzWp%|ՇCjWyge+ZgA_ ÷t÷؊[9R+ G% ?)|=z%b+ Iy5_5)_=V+!'iޱވPܢl->;U1Ly))BPf]'6w e?V*=lnEi*t KvÍJ2K&@UW\OAAer-ǴBA8;T"l.'U7 Cu: RגOi>$)|$咓^.\٩?vh{ Yg d5qe),v@q. uRAg/aMQr TAIp3 q^1JAJ_1>+cNBc~BZ#I9j4P^#Oq7`BmJV[~>Z&5T5* |c1E5@ѶA8yֳ *rM_j啶k[ֺ֤5y3[EoY)DgU"[C/#4$H5m aNŖx E(~B |h^3wk шuӵ:k'5]kߎ_Oߔfstm|"]{<]k4ӵ{TI׎{3־{姯ׯX\,T@>1e~MцJR vuJt-OHɀ^Nd&M&XDM,oٖ~hSes7v:jHv(,^FRV})oz\y6-_%0qFe\i^v%lAr\]h5pV *Rp t f$Krj՚=:r嘥 .CF[j ; čvh勪U*$%lRisWkA P-ȧ[3pkSpFgXS햰vW2 5wq5U\`uS̕Q 1)t*ۚao]oH&f 5ۈyv!/H$^kvd1d{88<8o"9ɝ4_$ǹf;|䵸eY\||=MuqПy5/&j@ zyiԯD|֥N˨ Ya.t:5[fl2Ik=lXFR\LI٬;b g:.i.&kZUs.lݒvƌG=>v`qS ~ Xذ&A S2VGXMn^֘| ƹ-m34h‹n9<9::9۫q'H$#Cկ8FZ`qDIuΕe-=Jw~U IzeUcwLJ?>y{.ߟ~sèKs+ sہhxKF- M-=PHB򀾸f«fkt%jޞ'Qq]ccg[(I;h޶cjg'k]^P+*`P.94ְk4 )V<s^ O}J3S S3jS=?DpX#jnf--TnR:1a''ג- pqm4, i-$d\ƹIMHTM-m]u.3*[7# "k",6߮EfZ:Z#0(CϷ[&ijyjB3emKWr~LOЙ,-7Ôa.G-"TUZowrS>MۍU+bn_榣>t^_9Ȧ}0/| rTe߳z> vgϫURQ{y;bR1A5^3_1vd'x/x΃0Xnשa%P^veʅ+ڬ.o;MnJyY'FLW"m'flHm =R'-ڀssY舱҃ k=vd;g&<`tʹY@ص6I%ۅd?_D64~\C0ӠӠ"Ӡ=qC&eǁԢwaғߙ%sjO73 53яix+`Mⶋx 4lSܜi5Lb TSl5ĂH'k5[x{ ?t- : 3e t~w PrGia(%C O5 ac&e\jh{#W>ؠ&!gx1T'.&;Z5 \42"8vGé1دYaYP2rnA0}6cF&[R=c>pa!q#.2=n`Z,ȘC2PYs95=OGe :5ձ!#q;m-J|H]ثɸ[nݗۄ \Z%T@m>(/@4ɅnC-#ӷ I*4-\c6vpxpxtr_MʽSs^rys\_^z7}sq4[%QlB ե;?)P&n*L\zl뷯ޝ8.-MooP!;"o<׋כeYpcDybdqLI%qY ܮIFkBqZ:}M%8w:yku\9D+ C!j![FN'h]ϝP^3@wVF8FTZ|_6'(j2[~frf- 耺rǥf[|)yȇm!28.8N[YlȏRF #"bMfuI=!9jC7Ap.d6C[(A.Kw!Åű4J\>}Q))w<;H!Z*!eϰ(xQ;UЭ?c~OPi]D$YqS5BMnؠ%ˋ+5`,YES^*jeV hZna,e}-Ǩm8׏WoBm:U9'.8pc횖ihQTŰef%R\,ƼFxbL^Dɖ^o2G4:vb00hI%V/"#Cbqr(MⰠ 8} ќE$VW|q.\h25H&:} #GJՏKZ. TVͰFs۝}iMDrD͢'D%/>u493<)Ahu$:C #/F&\^!O}j@,4뫙(> N CSDH ;ˇA;5HuDtRG/W,ESo`ݰV`–%# ^ۼ$?ǓwNRREhpM;'**LUR.WmgӓtPY9%<Ϣk2(P8@ɬ{[u0xzZN<]p9֧ɫy%uשt\3\oi]>82?:KoGyKzZ+qʼnqMKF:܌ arbQ caJ0ܔxh X&\|v'_aZgsj9y -!jr8~NƶRͼ[QB|~ëE> Eؤe/_Et҈yC7@>E&."4.lG̿s-sS0N 7Ӄyzm7[\7mckbL}á+~ MijFh7aa-"nwKXa®2nK[`c޲lkq=\/̭m:-1oa3=vt77=Z8zt_>eON~x#7xr)3ͻ7mu_|PLnuus%5ۻonnpn{LO~}#o ž~w}\C'{ ?VJsevNy{O/ó~xw77o޺޼{n/\^^]'7]}x~ +cٷ^ɏ/z>{t~9ϛݟ6?>ys?No^ǯw~p_7| uD ii:U8)owtD;C7C5qBdm:0-Rώ8Q;'@}v 2xt^1-ꠕ0q d.tҌmfg}l2|{x%pgКVFWkwjZ 9L 3 J`ii~8KEv2EڙҡvȊ`Q+ U6&+,Ӌ8 "C00g>}LPUHҦņ=a@BӵrRgT_l""h@wtVn]Dձ*Gqu3#L!%cecyk(k@en9vı`Sֈ0sÝwROP)Ku,C1,3=ZD½ڎF: aȬ55 _9V  l1@xN:I)fGaQ3|] q vuz10`˷n?>;q9(ǫKxS&bK +->{Cc5( dCi:hSFKYbzyOR2`T]G|W?i5?c1Ki Gkw'LaxEx觑'@\ wJ"K(z@$)m19tض2^1JYU{XDgގY"+Ƌ P37 B By:2bEnqG [^V넲V3GRv[``+N0B*Vo#l%YwCj0)yhT샦Z4hjp5+hJҒKb%4{a,w b ֋Dx?b =jJ<)JJռ)3 \)8\КYX%RB|WQP 6ەڂ%9`wZ7piDmhQv̈́"G<)zTP|h 4|S z2gGN;st;)jIzȩӏʇd RM{ 24U)mݢ(VL 27j}pD%O&ڐ =JDe/Zl(ak@aP:glDzg"2v!&PŀctBF.23"'KÈk$|Y-xC},02E0> 6CJ/=rF"Q]>[4k[s|E=* X47n>ۄ=Ro9Za,awlLBX2 GvڅG$0ȍ/͡6 ZCMa_/TvI(2&TȰD/k2E`:VULvPٓ08$6XMWU2"5Pz-LxZ4S+2-w4&(@ڡ1+eĒQ4lhf8P'* P_V`^^fQpGM| 1"׌jy4hk[DQok2blUq)nn톋#ro4nbh!Q>[ĥ!XjAՈ\tH2exW QԆ_HneJ/u{^#k3aϬT;z((聏F֘a & 4Cz͵-4C3O޾aia¡mġMZh&,r*qKjyzZvPáw.)qh93K@3!3 VO~>f4EA9Rjg"_;4?LQE5V%Oak &`#5nbLlRszέpɶ&spf!6Wjz_3E\,A уPYH42 Gaj^J5v L'-{֨Y 4p& A 8|> Cj΂jP_6puyE^xO4b+-$/"qThޏK)x .xT˘Kd,3zd&@il # 3 xBkKQQf" RO.z N vS1L6Dcbl)B-e`E\zԨt2tC"4&дp$nT#~6q]7: {.=  %F[$3`iEC2 og ə;9w\2t%m] &&%QOW)=,ZE8!{=YΛ#s0jyee;ƨ~Z*\ 0j3xb8i.B4-I|:}">}8>F#&w^U1 .&O&ŦvK?zĄA6PRYD^zZ) Д!|>Yۇ635.2yW) >j]נf)벞@Ũ+ϱ4.x4)墖% 7sSoCr~!\! sE5Zs,jQWjUm5$Hy P}] H$ᡚrt2 =Vy`_KF^(e~g5';4{m3)\P6zYMZׄ[~n9= w\~%_&9IEU55 L3A?NC>Ozܾؓ''VdawDqoI&uC Z.1$3QwD9k<ې5ujf8b,.hQS*>LYu<~kY%eyQ\JmA", wF׈TP J"|E*׻fTkZMV b=I{u'-=DIZ&Y:R "8n)K%Y +5'n]Nd^:ԙm9Omf[nf<[f[ͶpX)lc2]I}͒;JpVY0a5}(ȃ)(RR*Y8wF=ZI7 mDE)ץ>F}x,FĤ 3, ,”H1MH)^ZL}쳕Y\YcSVp"8sNO] iƠXkDLץI/x4. W`&8 w ob.|1ʐlLZ[[Зv>7w{CMssoܷur=aqCOoH CnLKr{IFDfcWN]8v2#; L >,vi#b&P6C2-7p̞Avݾ1'R Ⱥ$B# эFu`@2PL',2fǫj)d2B͐'9) BC4.}YG3}Ίyؖ-Rۦ1Gą:m$ hKXkŘYfbXo Hs~q]Kͅ"¯]]{«4] ƫpp~v/YÛ]ePAu]_*qGUh^'Z/>ߪ"<\(_v'퓿IT L/"|xxfiQi|aм4A0@.FҸ=VWFk-Wej`ÊZŸa P,8'ʊ.(T5-a‡@",`DnH)&DlK,%%Iw|wFȗNHIYVeт؜Wtx\j*X4r2M^"9iAh i17¥p|HTeS](aU77.r̤`E w #<HJ%!p}ۖR&O|PfJN2G~b35s"hI tD%p"Fij2NIfR%nS@b.043w*/S.j K&FV5|e'2)Y;hV?wzߵH/+i҉t&_= vCsFxK$Y,y˷a~ >݋[77o޽}$0 >'}_~}g^~x䟗^?.¯}!O8WT?y@Ge)swFQxDKĞ8-uclͺ CQ6JpR`8)({V(ŕ8#>W W&wj*A%]>Ⱥx|p# w]nd,Z;f$)k{oP {g  sA*&쵭(ˢj-"}E+x7 k洱`NJCgv@ZXSTaw`a[ Y-.p{ PI~t~?403h8fxoǗ߾x}_qPL^x3ܻ>rrU!|k" ?ٓx z@ [2f|1Ccڦ -V~ ©ed=@w-P5wBPK(YG {㊂,fKjj ^?U3ø?Q=~M,PH 8"#آ +\ʠ/8F'GPkls#j-521yC>琡D8aXiٕDh2_JHN>*;4Ɣ| xFvG ʍXA]q1#{(!>pf58: 8#gjntŒTBrD?u:9.9,‡vJX11VT `:,iPؠs8@C*vy 7%'B5؇ 6mCB%CϘ?Q^!PK12 ѱ CBj\E t]B-Gs+[x_\C8l>>5>ٟ4M S*Qpe~MCY:{fQ YQgBؤFg\8܍WbN$nh\B$JYm$(8&OQi7 %zeU8t"cT.iFKG,m_A8*(sLcJEHP;6WNp>D<,GCd ZStB!CChlJxwT rj?Z=~tS9n%c 3}ooܓVJZ7vֺY˙7=pӏgW<ȐSUzݮ{<o^OwߟI0lQ U͎HG3\=O4LߴX N3 7n(DAR<~țeG*@iϜ,| b YHHh|(70 YU2&ݠmE dA,k!j U8;a҅K1Kԥđ.vYm<ʲz* K,y:-0#!5M<`B 7I|^i lοH_RamQyR1)%XCAIx-Qv5mdWvR܁씅Ռ9 c2# ;a r$B)[I)%vtvP͝Lk\9 Q Q=e 5Qd,}QLmL!a[a|!n&=9Ev0a*0,y<@,zMgCʓBw!@q,xS Ōt6^ixlnt<޴xqլ,L29H"Ál·_P9ZTZPk/iY =2oȪyf.ed)H ,T6)M`G X`s?h,w쐣_) eYKٌ* *PsG^.1޵UUU'hI%LcWρ&jH2 !I-`4g?ӆ<#4c=G97x '=qkxVjLWD&yȓ&Z+jͪF~upCX(Gy:si d#sn0g+n>,?Jz.)? CW}??7^}~Do"4&k{;hd>WxQ ؔ f<._F&d.Rf Pٶ'Gj]X̻Թ@ \%ޘ4Lʼvz2#:ET#Rˣpyl~^A5G@U`Qtv *[݊,]>mraQot}3);ObUBxT)gʣa,Rrj@[j.itF=nN,,K[K8nBwUQHNbey/.yEد/WahoR#j>rpLj|:0;ͷ[,zxzy՛mk%DYD=Xt_ѺZ:{]{Rlоװx,V5=쫏nޞܣU3[-+%PiDlu&PYs2%vd1TFk556ԢɺQzl,a˧%Dd`]ICk%2[WJP3ߗ]#+[#D,ƧסeuL  OV0lj[W xUV&yojq:4e̲#K|j]Z'ӫ7I;_YJ Ia1cY=>\TUɍ |)@~%urH.Hhkt}HR*ʚ#eq Z>Yv{AiNmv¶\ى Rأ K!+/J#xȊe̊W6*ۚmف ,f-ke% ժ`(V`mxpMT*&Q~l5C'j-++בB[IwRw =7DU8y䁨ûCzևF7ځpp |#x x{7&k|^{-bt޼}w~te9_ iKc/z^y^ZZ4ίZ4iV' xxM,LΓ'aj=V"OU[-ԑ!gllPצac=Q?jL}5:tٮUߔ&lbn뼳Q; 1!/+*"rP/]qNVrtltpvE-vB!83ulu Q)Gp"^WPP!4\bU\Y;7HKAK%iVT i_FW&7 ^Wi:l"-2Yd>h`B^zVE kT.n98OV_26#8.;GաX|aG:aFX8!~@$9ߝnGՓp쨙B7Ev<Q)Bu|nP9D w ^e{BŐBzPSlƫ|"+odk kqp]D!wXI6M X~㖢{Aռ-<6Fz[KP /RPturߩ$JS9r/Fla4RQǸXd dخXx."N@ kvZf{$r,©ޟfU,7[xQJLY;B!Ӯo"[c׈DlQm#eA{Еwl*Pv̚Xop53zw Li3Tb.30,f{Qw;jUy#V;P«GDN5MC,bW *,^.C !ɬ^m!aղ 8J@{'|,N7FUUx`g5{uCgtr *iK t'cȽ 끗> {"wR1 .1Xj<23i XDlvDŽm:Pc|`Pǁϙ>Ɨ_sLMZ~l]i]/ }߆UFrf~ً!EQt6ySq[m):mkՐH]y3z1Ь[sLvӟ:JUWjtM*KbXE`QA^&w'1` r֮N+zBc~XcAT!Iy40US J=oFbn #fhׯ'bڨ5NP} ў*L~.)w-}F&c0kNb8ȆCw,SMKsD*o剩%w* zϼ(iVeZFeV&] صϘt]ӃODVDP)OIdI*#UF]otǽގo?)mrdwa&tHZƣɮƆZw'[@3XguK=,|7n|Ed\`|EُJmj74ꍮz($k74O5rGS".r}G^w`{??r%]! CqB8f',BQ2M!W?[=@IVBDM{҉9]ȱeAR^Gxz*j.?5lLFXΠ,'͔&% Q8Д'1Y3z^9ǿDbS3Ԯjǜ<{VsUkB&1ń`x*Zlr}l55"Tf߻id%2\I J]"dqۚѹ]lA-'+bQA')A3dĥ |Bng;͖/ 6X}){=t8QslLWFLXq^ݾJrCPnc N6קIOoC ^ב4դmr=*jrl8>UflI@{t(c|J}Qўu{)u9?ıqcpC77C-_u+<`L!sڞlj.$%-rD>"ҳnՄ| ?0Oe]L86Y:\k +m=Ð(e¢Nl9]?Re _ I\T$]VU LX襟^6(C&]U*5Qkhn%b[&[}>?{OwؓU5R팬-,M7y1*d (З9n n3!T|b(`T 1eDPPuvў9߶n5_p|tQ0Ȍ;ͯke[[$dTRPmBD0exCKRGLܳh3jX +7\Mf1Q3K/iZTVʚQԙ7YWLi&05LqeNjIB5bUUB4WgۨK>ћ|`g@lpdBdB-La)y?'#,a͆ n76˷ҹn?Ϯ~u 3.COBtaf1 )UT(-(tC>flk5]ZY;%uڇ5gL>;="9EԮD憔#`f[[7O.Nb5`cU?IEt=ޝ3/uHXYOaYRo~Z?'[x: Xe'πQUrhʳ}}]TssJ1豟v< h2 L, C/L6₥mjjvW} sN~}>mgSmQe1-%{nrD>sc/#c9 `PS&O;Z7@/kq0db8Su"Q;q\~=/y܂R4ԾN&Iẃ'Ŵʎ&fl&#U 6ge-ZuvI9ofQ;Mb)\|9lا2̕9gF'܄&f́8XwB8Msa|0~G\uW%69,#LVZ;!:4};EY=%1@-pJAᩮ};#h3'K&@‡& ؤΪcC<)zʌ/fx05J/s>q.(CY?qfMMMz {QNΝab)QNt}"N*1, N6?ᩊ7)欯VVub n3@ 3 (4͹3,bc7R> 8؛Ι؜!ZlHөߝ[q?)؉&iXFr/Lc.gu]y;D1Ç崍WjJv[6l;xzo֑Wz[1afROSj:X&]ZNY#BuP>P낮;o62`e(\wߟ2_ AeA|Pa3AvTKL]ʗWډ)B|AHy\m\(23mYpď3|s_bڪֶ~e34ꄮ^ݒb 'Gj6x*:o FsHZ{zMxl0Z%O3<$n±9y0*yQͰ|| JP<.yqXE\o+< C\8eRt6)w0+: R|"LI0OKy; :M7agG2^WkufͶY%> "9_|1| `NNs)sZʰO-u\Njfs̳\k4$ur sdNTJj7nz5*?ֽMeI?j"][56,RP_7UvAG^ 2kl^ ;EFY/~&4LU_J2mY{"#-)ʀ*H2>Mw*='br ߨn>:4FMfW~Q*o^h3hƠ+];BC-}[6~,N q<$G'1NbngoHUTD9KwKb+}}uyi򫧳6On~{}ׯ~^}o޼p{Û~_?|;? |_ׇ_߿_^?w@y/ԟlɋW_/o?n^7?|'ꩺYF}v\ݸ)]F249uP@y&/k|:t1zf}Zz&icbszv3r3~ 4qr=ۙfNÖ9mfaQas^VD/9:ir2a Ӽ_2׼t=>,X=J+6͆v v~q[D`Z"а,Mܱ XKxiJ*Nw^jvC4a~![N 5}HUۜ!.~˺4gg~ :[NPAzJk|>C>]Uٟ!B6]/:hyi3 \k`T-9k.mF-u">87# ,+qn\Ѕ-#~tSӅ =lrhnzᩙ} Y=`#8A *#**\60V”Gȧ!zӰܰtg,h3gm6ZRVt, z&e-L? GQ>cqpJ2mEII9/t2dvlZHoD]sp 6QIsid=U(r@ e˵MjGڔ- ў2RN صFU.)|QZ!]k Vl`'ޚ]x/|aG5}a.x:,x|Ԍ%8%(D,]܈@œ Z p? z^;p5LiÇNASըtt_&}fϒ D`P4[|`tCTy[0S6bG-鑻};l/xٽ$e$E%V~`_oZZx=7U+@!-fC^l7ÁֱsPvTȒXB+8G%j@PZ Ej0bY0Ӭ5U8B1IcG bO5?塋7 ,AK){D?iITVc5E{╾E/`Cv4c{Xys>啅 \v9m 5:ǴlY {?{y37!XaH;]J΁ J7AѫanMQo1/:.{ܤM`N/]޺s-cwqV!B#(3`h{?Eej`~ cetǨѰ̭ 0ZrdLmzxcqIrϳ{ry?:/Eyۿ}aZ틻o޾׷=o>\??޿x76W_p~|_뫋Wŗwü|.}u}ɲϾ+ ~^;e_x 6yoԫxlܺ)]/5*@1?M`jkj7@lpKx gϾ[CO>`$#=d-G1eM!ajfqNCXvʀK݅ڨcݬ/%a6Cv'%6t rՂK ٽ S;m/(#kUyLIFrڎ/O&tu3M$\8N1XJ˛mR9LYkDw+.ЋO%sg\־<9ݹfA]UsH݈҅o:1!T]V8=!؅pʚ,cbT0Yz+-(Kj^$eoN9ہ%| B`l5G)`NxkCvS7;Uob7`;5j$ Y1`s߅`DGXq@^g+ 'ͦ;݀juk ~MkBk|T256HAg_%ZR#I$whIKa>ă[=sg X?'AB0UG!t]06-Q / ~3wg:|6rpI%z7 &:(lUOdTC˻4b`E&D6v/h1jI yb,%Ga^pʘ3N]6tEj>\ra[0- LⒼy|@LW-"<,i3'[o.J$K=Z}3,uDo2ޢSKk O:"v[{mcdGV9=$& -/F)$D2!!ÙmcôvXч J'@0:y)aؖoY([1 +̪k{L]2k)z1VYV9YJ'Eh?w.G٠Xq8EgWئyf C5ljnt=9z ,ӇF kXh!lCoA( F'mo⡧s1=6)'%!Sv7(zpCJZl7!35hNpEeY^MsU'԰my !\JŢF)Mʬd8" ?PM<<#Co]ȮB 3%O\ϧ& %KY\J+[GN9)d_1[ޡqJɲNܠFR"2R<`Ca.u4LI@ zZ"(dz-l%wsxu'S`6h:=TXP >0&SgWBJ8 \*i gC*v%GZe1e*m20[Js Xʩjdkm!Э$A x$jDNVq*˜7,7 ~4 :YtR5 "J)o8SB? ,rZ=aUoKuL=UyX6Ȁ4MItBN X,sC М4H2R "T0pPqqZ 3cB.6hsPeX?Y&–v:lgBSIҵ K[CI :ڸʱAe2VD0@U2t iD!`yBo`K̜"dM\99b!K.YT5ҷ~Idw9IXpm! 1n* )-bQv!:c; s0.'Su ͎`DCQbsa*4\rAhPCRN>96wkJ㇯r$Vbd3 hZ\AYN1pd~H]9s>&J 8f3eq,k\Ro &%tv&ty00+ɴSs{ b 7uɔŷݭ %[=/4%~3 0鉈f:Ob7|30D^?)af;pH6, 01X4Qkkq,QR~{' }vSʟ+`_mŸ%`tOd%]zզTJO @9a *vG̓ztFCfKyC"Fr~. ?r$O&VT3$3L78HW//ۮ ,bƷ1Li3C"\XĨfH"?1 9㆛] \@ BAeqavLRa;xo 2ޙmpD\D[|!D`H\ UB'ZrH ` Y,DK:N5eSŨn aT~dP[݅b$&W?]fmϓrmNJ^TCTn3jBd*]S"ETQ絸 !{Ouoc,2.q$#6T =phmh+%EP[S` 5(,a md[HeFN4]#j3ٖؕ]}k(5*QuAa:r %ᕏ&I2]ۭrTWKBiRݕ'rrm 9Zf4Oѵ$ZYjT=6\ADoԱVX+=0`qŀNjx;{nA}/On@|@(gEt^N1i'L78azCywG~T[eO˟:";/>q"G\>^ݷ_~鶏g?. S4 $L6YtI%F݀0 b$I-U E jRz&\ MnJGMi:/뤑}y^X5 ~ W#|$\ui=\"E.Z mI ܦV爆2} \ߴN:> $bKvQJNmqH.k!PQk^iC,6𑤢Vۑ7$*b\9uji95i\+}e| V/1efvEĭY#3 b Yބav7dǔc!$l}@i8#(U C}1sN?X顂Vy߼hNv`ƴC71CsrM}#}[\84'H HyEa`AI1uM@!Eϗ/b啪^ %uEU6U M9n3&!U39D9nfE+4iemuWA :M(+xP%X#cq (= - \<=uBwdgG$m eb Cz:kihqZkӘPƆq"M+2EiޞP(cQ׶j8 wp)h'TXe>xd ͇e c!R|PqQ5.15ô%T\yZr>,fIsk(v{N>iϭE6K*i>NP8@n—3slL06dwlt4 && h VӖ7(:y*U.Q.ad X'?c78y ՉJk'2($T(ه g4L~"PdIo!pC)Rґ}t͵8Ƚ}N,e3JtDdbBHK:i1!ҶqT0F_Nj3@<d?Ao c6hnD<^YeO6P H\6-4v Mz;@6!%^IiPyߨt;DOy\`ƘF )r9Ǡ67jUsUI-5@V;:3XH牒>4q)r43LTK&|u$‘- MC sI!12B%#n]r޶~"o ENWmT3@lXrK^vV1tC1! B33x\ajbqk8>Sn+w/dMc.q\DHݠ isQ+Wm%.0=4Ԯ-v )P%9)S[:V5փ ~&Sy%')*m!Hn/BZ7yd`|;JwhhMcEsYCG\ySֶ|_2b}N35!&yu95];l_Z6Z ȟ%EMu1:-(Vŕ'1x/09dXS*{i3 <>)]X>D$e m1.ej8V1Es9GٶHLN Č}$ Ey PhlfjY*"#MkK N֯ɤ!F~vG- > w}#L\zv=ʹz+Y6ZkhYۮ35F.@s!лb{1U 'Vw(?9FNea)}YyAȑZiÓ˓OnQxƤL>WV@hf~|/!cg1f`އ雇߮oImtYO:<"Ňrx#n2 %=· >;q'ny y$'l{s%$z&*O׹qsl831rue2wQش@ =4)Mrs `Ypy1eJuo!*um 'n%;t>@Ϯ<*KJ2ÙY3tmlԴ)7=$>ηmjȭ.{9jBRkM>鰓K敊 ,Dь`XS.r`|{ yojpǾG@]> d9{GI)Y[A)ytȡz~U૮֬Idg? e2tC1]}~??N-~{P&ap{t!6vQ mh[f jES "]XQRCObV)9 Kc\򁁇7 KJ&͟ Uv5MiiL r=gKg ~C3*crc:<=ٺō@ZSJ-E5\ 58qJzZl5vSt)7fޖۃ\skAųI~2R+kxoưi1"^&vxq3..Tl^UyicfrY=9ivXJZ~|2ar/~e*{P|G.}L[RC[sļR+l+ڣs\d],d-׬0N+KhY/־trে7_|Sl&ëoK@j?!;5"FCUrà+khUVܽɌy5ZѠtkO¡b]]R#Ya% 㓋ϭKɸߤ4ZyW:Up׊읰+Cܲ~PrO .![mun-$Q>Ni:rcfp˶ygfCY^AmyU1ٹpC?Ca5Fɢܰv6ԫZ;0s8H~) ;:vc9b|hw?CaC[y٩XZ XvFy.Ҋ492 WR0V醦܃*&kt,*A4:j} MC z 1;[ Qp65 PEԘU'8 à)ecyFjMi|HG,IWQ;I~3sltfع1XQd\l8H$cQxFb6$ G*Ph$40/I8 E1H;@<=pTT E9 I ZhDOpw04af7ȮjCl_rN:OO8vY“To߳j1C vosu6ecH8hxFtSttn21:tW <'>; l^X琾`0`ec٥C&PY+eēϏPg#NX}ݶ 1*ҠS ɕam0>c7(X.4R"RGf : ʼnGi|l S'' 5#ctэē<<'׺yz :5/_BxUO8EV}\ W߾-⻬'W۟#Cil ?l^8V8m}}rQG2~dC0eɮ[ޞ膴7GqBoC Iż (TFC}u~~@ pꓞTjjF\r_2+ ш> 8N,RJ+\{<(ߏwcsg;Vٳ|E#/qR.Rf0NzkjIꜬlc p6+60jedTXDHK:>'N}q m>itqI&̷TFҕԵpAe3 o S->/HkǤsnWyo]b4Q'ټy'}8d0c|g+adsهLcsԹCd756 |>[2KҔ ;5ޫa6hJkdUMAm: m4ʞJ&vf4ӱ6MڤɹT{YJ&'獥 хn'JXI:=`P>m6K)$+( k7S[8̏bε''[)*9`lA rmpm(ޘ͎s`FM156Z`A8H9M\`ؾO/FTϭj-YstFk9e`S%%Xy0O[UUp:nmkQ:, SAVuơ:mSwrCp1u>Wb,'N-) MKÒ_4g"EWSx̵1$ömU}dHc2($%#T}g*1ٟO2i۶EºQ%{kCROu ݉Oc?@vD球: ý^ISb:A`fO6{Ѷ9mvہZ|/~ݸWO Sa.{/}zWҵk0)%A؄DCl ܀[nTu%åYdFqqIJ~)aQl9NzQ/rCCJ):NA۹Hl0&XzМe$n#T&>w~"~;ۖĘ(Tg,Mf3lB6~W3/|"HOW{b\eV%Nݓsxf؛^i5|gy"]s=ы$]Ő LܘX:[ש"?v[37bi/g O7-i zoRL]8҂rF9<4\~ݯ]6~<~ݞHj{? g_-VZ>y|娸e0~+x< |sK h֕wPy*;DfƼ4l  Axi& @De x*^>QFQr$ a]@Em~ĆgLwonx xśqo?¿~>=xx꧇?7ןϾy~gpnś>{/2U/\wu?2U. B h&o. N'C^w 9.}A Gͽݞxۑ'. _^~*Ɏ P:Q]@ 3' -rAU'5h8X5`qsApĭfThњ{[¾̅/$. x!.ΙmO`k|G ⒡@" 0DVBEW˾\NVHHuOE!ըU](<6ʓnO.d=7c \]PhsfB'cм0Cq拮]EAK l]#I9DZ͔$VwU/nfؔAe` 2& $"u DJ }/Ax%;( f+o^!D`/̈́Aqsw" pHîz?I=>H @b Ma .1X !J{]Ʈѕ.xȁx؋ = 99 j%mkP ']Z5j$ /xWat7JPuNTP5/x,%QM38NV=iV$LjdQl\eX *)*a E ˛f(X'+1MV3T5?[سӳ^gs2^$NAzoo޽&hIhSisFږ4"Vm|_jr}~~-حeBE+9/QzVfo`ZwJӷ/!+ nj9ouAQk). } 18LWJHv-Y%(C%:Px8V㓶ުUK avtj AI4M!"DmF,9Tj  B3voNTٮLN]d0WMǬGde;6G@wF8"K,HN`7 ը ) hF (x`$COvfB Mۤ^ᡬV]2jУpQ~gչꎭiɉ kĄ@F)x֙Ԛ MeD3؛ܕApE~ɼl3d9Prc0g2Fp$=TCʡY׊An R q['c̗Fdɥb$6C#(UZPo }>e4MKQ-w12UGӠQ'ūfހ}6WPU]ԋ4 iv|&mʁ R-{ؓF1Ϋ7m |SýǭTl: uJTݍAq+~ecGv]o2ʨfģUl#X*hub6=Dj^6 $7ke-lH읹,DyP[Ռ8w: %Eom%'d`Qq|(C뎣NeuMnḖ5z yn,?5.3.f~on)$T9 Z2l@.T&xK] (3@x^x m!E}p/Ip*솮ވkd"|l&-v#-QhA.lh 2uU8 x?tNX a=wN"w 0Lƨ}LAto6 &-mki}S_sL3GC GC#aŠٮj/nFB"Dsľ(H ƶǻ9]ܐ'6\o@,R 疓?K5^ه7 fauIT=َ[Á=e<0jSjL}0ؠrDjWZ{rd`m6}l=gNG'B 0eE퉹3Ȼ/04O{AA>Qr##64hq^G9j}Isѐ)mm s ܯ`w\AcFOu>d#nAȈ RdO"[h2 qXY6bCMeZDQR@/xYs9TPӇ7#صIdB Tν< HuAϵFypwޑMQlj ؉bѿ-(G|N[z<G *2 fjr A֪Ejg4ڃ)5>4RzIun>2֫Bc(Lv۩Y7LIԈq:3:;lQH`4Y}vM2"7|BV.nc(83Q| >HA0$YÂv04`UkY/1etysHf/?W_J#싙g_L}˛`OOϽags#K{݇~NYR#0I?_?^O7?oJE96ԇNG%)z W/r#0mkT)Q$$[](dnuADo8}MFbp| okmnx5eT4Plj=ݺ zZ+V4ՎOWI*~8֓/$R*b۟xͥ3(*< 'eI%UkqMҪH‚ ^`+d 3btԑR<"A{ձD;<#^?ň؏jJ]C}[q_4xFU9VQYRtáWiKf`ІÈYEFDB;hUkIiLj\EIAI[>!R RZZ+l l&q9j#B|,z,0pA8wAUg9-aDeR)5|eWA!i I(*YP!@S&&V40:Ӱ=rx$ ɕ%.8Qy.d wG 2`gR"Tyi`RmOY*T7r ";Զ\ i4ZfA}Ԃ~V ѡ/lG0e`! V0)"uDD$Q]TnS[PJ(WLc[;$ˍT wPO2#TC)y}5 @Ol8`9Mq eG!4!"zG1G4fR.$^'Ɣ'p\.\mW%0 `Vjv*bei%.` 7L9N~ G9N1Db@ajBٜ&OҔ b`lӨ( W'=^bE`RSc96[jxsM7]:SөWJ>%@qlѹUh_؇EuMS:kr-'!֜3 Ý ? s턊XN_ aP~??>s%~}us??s-Ȁ9e |yy{A]c 5)W'5,OT֖ D'hԈ3u| !ŎDL]焣b[-Ų4 R#Ĺ4Bd" Pryb.m'xÈk2&E,CSn!ڲE@ djUTYBb)GQ,scB]pRn6Uտ S{:}ę圥N(Fv6 $9q*Y֐څkh&&aS/9Io~傲 R#A gdZ̈́\eZ tWD='$A%691F!/IԡµdyL*PH@l A큰V? jqe ;P'!\b2rN,)DvӸ5bhkrA _hE8qvJiJf L-O@kjCN9t8n"wj' 6NcGG^n7~h&4k5JUMp9DK y̽2&'<^(^Tnl:Q<+"Fl<`'F0%06TV(~CT? ",$I)qt'.5MbKIfBdhVmD; K UC u),( Y}PU540Uxb`[ezUŲDaR^y{IltD%&c{b5)_|@B&_-c0k֭,EֳD_ N!ǼMtNϭԸ$',ZtBlv(!**s e%+Bނ/@ TkBT~v\G~DedđR4YK]*GڪمʡiCO~H%y\d̵5a|=׷W)mm ޭ}EXW?rg¿Ÿ -?ß ' ! |7]׼{.pw{s7wqu>.\}Aܨ} M1`adP!Zjsh_rǷrL#349u6n8VkM&~9)U: v~Α6=C&`9zjhBW _q@0 :FL0=VhdMʹ\vf<)gY=M5M!)'8H+rDP FD~yǹ Z`'"wɥŜxOO-5f"8s"#ܣL e̺f*m $ϕC%<ӻim6 '8) 8=* U U3Cu01#c9 w U"But姃tՀa+'π.hH XN6Ht,v`|s #r6:c{4/vL>Vkڷo%X] q#o"FS-ӛr oFZY|NBj:'P܍hyܻ'"EC7-PZS{HZobKMjM3ml2Cc@!1J]b̲DBsԟO40&cW20K(I#7.w',pBe$6ؼ -"Gnrj ;'ff .4u(??dH\Q aWYgVwemu9w1rq2<ӡeGmn@^X-:4>x9&\uiDrkr] ٚ8i;)WH0N1 e\ t[ҡ*,ؓ9vIY!hiIk0 v+ɚOBv<B5ٔ+>Pr0'o4H&{[#lΌȳMϐ@\|iv5RBj:fO 'jB S@ 0-jӂ\A0~j|BG炶I0H%I:}AbE>%6bA ?+d%h~Ik4-WUpqbiZAm'UXW*4-tY.ʔv"pe,-ȦJ)R w0&jͤ1Fj DV^:=֎表MEx Q ZQB# {hV <"@<&}=ӿZ_4Yqbq"jU)rk. g D46{& %DiB$ȣ !'h (: adA9Di]a3Ͳ(e&Lf!:BG",AHU_1j X[TV_O r`1yi/6g O1VZ7!Z'<R;ըbi(p%˹s4[gWe@c:k2#m*rs ߬E@"`Qg&'-b.$HJDyL C쬅k<&Tޡ8 LI6^m1mWU!Ѥ0*QT'B3 #ۦ/V0TGr`NeJNBe6tp:v Aѫu DL2[A\zAO [hhaFx6/yi@!]PU(^ H娅H49!VG_[+Ddǭͬ=u-[XvR_v x0* *ʧ9jk{dn `)caeZ>> l/UB*|!y\JŖ.ǶhG%n xz|џ'!E tͨDТ*"W. Av\TG⌦y4GARqSH58^If@Ƥ X #K1u'J{&]0&"I}@$r;-2+jF|u fq >jr ^ _bYNZDl!om}+Ods7m[9\E%m6=S).XW8.a A 93.#ĥp wayrPR[v$qL<;=|%yLq}1sV[ܮMsK/xyB)a ~}NDǝO菸txww7{CE A\$B zuh ICĶ!zH7kى(3f2>Nn;,&)x?[P l!Co0;bQjUI#4~ ŜfT^+b՝b49~Fz R&gwIb87 t9аzg@ŧ&R@2T(v 2י<RiZ vBҸp YѿXSŗ_[EClt݃ rJ2*;Hs@.|w*zm*<n 5Z\DRAHct= T1nu@ٴȚ.BU^YQzV葹jdB!385&D\$=Q5<\frhࣁ{ݓ|C~ ETf@||^74 )aUѼ 9-?.{HH>נ20j̥8`0X(sp QǹeFcI5W:z..RCq]hݤP F $=/k@ _`@I"^!huFhI Lbo @ f $e6ڣ\*Ɖ,ơ`CXv xR/ Nb΋/`2_O;=I<ٝN+w$7?R~׫_nӷ?|ÛOWfV狛O ]pǕƽ̝yzO< o^M:_?6]w޿.~`/6JCiibZOLzJ 4KLm:H `ikw -W5A .R5LLDΫ5=7TPMRdAJ=Cτն5ZPAh?/A]A|@vqh8/5Lb@ A/hs/Pa WfD"H+ZP4BH|WN5[d=J%8뼀q7uXB1PhK/ y&;гv:*,R.;`,0CQ {{T"H +f!xij+!- \du.3k jL ghM qmMPx,~ڈc^V:`Unwn A2lF= ^7G ْ Q2ǽE-J[2Zp?9#Dh;~1=7JchTH Vj%$0vidG64MXWp^WIr7 .=Z49 pMJxI4D kA=J>PuAۑK@syCZ!٣Qn{qMc*B4գt@K<N,G'ƂfcL W6ʎF}FL\ t֥[DdߕMGѪڵgie#&WE xMM1Ӊx)Sp-rp (A74<f(즙x>޼V4PG j Zq={12 q@ L5*"Zq _Y"sǢT$y[ZW>_@LG,PUs "%9 Fib`@,ȠS#s -.nTi@-hw"Gv:iň@1";atBf:J쮋Fب b +-P;RSF\x:haC=wUwS8}xpupu#!޼?={CAKaC vzz}t=OA>]f+BoO^ɹK B_>]c <=~?_|px}w{{qy{xWO?ݞ_ \ߞ~xyeWoWח7(?할XQ@y~^t.lY%c9.N{tޜ Mw$U%=_䃊E%4rV'aM\& 1(Hx., 7J *|ةɅIA%Ҫ Ҥ/>IiofI7TR$5 ` n13PvJ L!ȦHU @켱2LAӪīsLGJN Zf n!xS P& ώf횺 o f1calT D@j(R"GyqHWY5m&l]2v8xnI{ x#+o_$+->ohQܬ`&k[o@_>9lZ_& @“(jݳ(ȂNk>$Y!SKLjxF/( UۆD$Z!"\r+86YUvƐD zma 3V 'iU'TzUon]$QrvM V /n0-!+dQdJ#_ yCn(tem7U/4pO!=BIlZ_}V]"o,h~u l8gP1W"Fa5?7)|XN v 1a~5xk27 D)H#Vi:Tal7eTDH*SF pT')٘)}cLU(cL$b#(+t*7XuBl=;y] +ubj ^?r_s~IQgjuVmwn/O_zaO)K5駧_?sßO3wP3^t}G8t]AO^Kw5$g3%ruF c7@v%F5%y61ѩi0`X 'h\m[mz'ؘnk't:mf3#IhXq mXG5A:Zթ^a:[X M JF Yfv*{ymoj[k{Ve$&n,ġ^LVEðQ凋 LQ{$JDWۧեzx,MWfQ(TuZg ]&vJ{{ZbGS{)0<:z (Zͷ6-1ȼq") ‰P @6I m-E w?D/V.+m:ҞRV{90yUHE߮?sdZnnc7jx.F1 vԢ`ѕ{7t(}f,ϛzS7%ʳY@"^V3ܛVa}aAz0U> rUқ;)Žnj6d0ܢ˥|a 41<rqӪxS?L S4=NNsR)sYB ftDu>vNF-2ÎTw4Gs;)oUREWW2rQHuP6xdHji޷}jZ5ɟSS|%3<e&} %$&xį]Y|=Sܱ ʕoW\0;^m\;S|\&zrѧɃ(kTLkVe8[+>ȎHt\ `ǑZNYcRë}Aa4,$|Ip4ɾLmL-/U)yJGsӲ_X/P^:Yƅ(B[{}8 h! %[@DT&KOc.'[ĵ|qtG2S4p3![XOגn5&GHWu[/Yqxfm`"ڶLt.~ 2dee$1 T}/†<êm@c d ]cJo29v: sV:k__[\5|*Rvt]rU 9\NTؤ'̐!fψc_TNC8'4Pl:#{(i94Ø-L-^|u+ˠ断O zM';<>Rnsr BXwdфk8΄NP֙_ne#X=[n '6ϸTbʔ3igΓTw|S8lr0?"$gT笡zf^k{밊a9zea9):+b8\K'QKk&;!%PJ+~ʈ%xSL|͜êNk{[Uu'/AYY59ǑUjOz>STR(9__?=}êgyê6<êS? ˥Pljhb\Q'BTɎGh44uf*QqQ9paخvZ1*4!.7XOHj2|@b%6q@. /w t%!B`[S+XI:*`:K@."߉ O1F0U&fπ,kH y 6B2B4j2Ǿ鬝0T\ ͘:$̷*F1X`e+ؐ]ϥ׀ᚉSN2ְ,3S]L;(mM"Xe= fC7l6‹XeWcV\kܐT TIuV-%q1CFaNb0}l Y⚵$-l`6t>^sݭUoYgź)Ӑ*-(;gC$nuSY#iɰoU9[`@b~ TDN;7 B'ġL)/EXb=kW1e ~=fqA?p_ @>ֱB)qյ%MbhiGÆSl;:3BFRym|HM .1ҶRa6Ma7yG)̦Smlyl0kFkMFt2\ ̰@Ѷɺ.EPyaӷ!f&F?7̉sFX ],M¤tAzׄ.Nk5n|ЍO_-gX'\VgG6)BRrU~c0[`%ImrP[TVMfÏ+r;|˖zб kTY^Vٶ=Pasc5s}1f`I2_KKEe´6$=Kkl[kB5f4l-p]QjlMVDʗ-4 m5ŶXkvѯF7*l*ъ[Ux5xqP=\blMnKep ,H>{Pn`GN^3)ք.닿ԙ31G!-?31S@cy<݆-q,6(I)xϴ>9gxZ cjݼ=ӜgF_733i7n?֛7pv>õ>7;{x/]s=Շ??^=^ﻛ뇏ȧO8˖x?c./9-b{lx8ES6@ܒw8n_7 6a#tڼ͛VD>w;c.3[2ӢUthD3f&,!m܇:sN6oZ%O`#l$n C[Q߀n@֒-DML(2f7 0B ''gf3 s# "SԛlZ _24߻^EODdž t‹SHj T aY} v*pvBx˰$PbZ,(51'G5 m%ǚ#퀬^:9-;GN|mx3o$xyT$ҝAئ:3Y]' !HѬ,QjZk EQt0\ 3@tD uC>Rq ${;Ds<lebSj&<(wTkVIr?mbf}p0щ7Z%9˪ mr70Z yK%BO^hC ,Y,/gtۣSEi ͣ?i,< u 3$t"Udb(Iѣ15u^};9m+@i睪c]so?߯>ǧ߮//n=^^__ !_._Oyyzѝ'}ğB1KVP1 r]t9`(XfJϋOy2QoA}Arc@Q&׼FB@f'uܰiv AJ,\G2VXN1#E-y4Ws9m$j&:dQ r]YL0(L~)<ې(N{ݟ6.)0ي;x:Q $ADB%ZXLBegSnVB& Q~P}6Drk&UBq+fjT dYpP S4^|*|IJ{)]È\D"d,0M/cl$/FޖC=MW;kSțWyXx"( BOѻ VY0  0 abqX`eto 2LoRJEH%`#"1xl#x$J ehOm.*M~0B󎍦,Jl Wa $Y4(ׁ%"Tat!#i3w/3YԠOrX)ڱO+yOvJ7H ?9(A$Wwrfq4GU{D!B 9]kfp"VR´"i|ycSlqzc&iLs"+׋X n7D@ LAWz̐P'$Q ! /YR~gGjZ2gJ,A 6^=Tp0 Hb]~ z^=ev9b>)_|!}IFt"+ G%kgLH(C]jSf|~AN{-۲y30f_Ȑ2gc2[ď}LdJ,iJaXX|E i6d1 zT#-LGp2UUBZW̜f9%Lt`sXW3D8b|EN/!yΦ4YYmN) L(-u/fN%7\[Ԩlr\؊DAs٫B0goa$p?ְ-QS H ԋ@el`dLi+K8 RPlc$7o%+.;Rɴ|;tWTt_9)֒$D`a:K!c@0!jfem:^eL$o *ULsUk2IT69G1rT,M0d^ݥsŜlö* ]иRRh(M &&/#yj*J|BC)]Y~čB+15~dpY{"!Cy dpt>PIVW<:X|"V9?1>H!\ ]oQ-GRч|ч`ݼN(;ELh >5T\-_0:m@|xPX3/tc/ {OE되'&#Lėiv!C h'5 ~do>he6K,mVHi -#ItkTЮ6K߯A_W^iȪ$O  E+P* t:q⢱==a|U2_ _*v> h*I QbJV%/tEZ=އPh {/ijwJfJFmw P_(R5kEzcVV$ӑSI$&la%8/f'}2Q(.϶DBEkQ]9Ŷe4i ڬR&IxŐ_p҇aeh]WHXPPUR&0hƠĞj([TKR;D*o($=> aM#I[E#yկkɨIe=`|ɔm\Iǧ!3)X0+Eh2!n;ar 4iO2qB'`d+$%qO|cպ:LWNһ!^JL,ɉ$Ǫs?|u]=z]=B _D֍??OOwow7}swǯ秛W/S;^?yh,p.9|z}/ƏKyŷ7ǻ=zx=?~9>^}w|Wǟ5YDOZT *^^YYխ0/!!feYZYoC &&bJe䓈LPHѻ/{(NlDnϒѕ OB7yFm:=x O3=)m,Jմ`A v,ylz%XMz@tWJ ދ{=0d/o۳Ϩ!"9bؼsO^KQ/B$+TCB̃޵;mY_eBY,@" uRb#_`WzQ2a3O'J ߮L%_VaC:Ѥ9lRHO%șB*>@m6却C55P:AXYr݄̃bM[Yv,:IEi"ǭx5m?٥OdAEpOˆ ~I;7"IlΛUtB-EJʒw:VuI A_BB@RckN":AIMKi*YWs0+؉ER%uiizsZ賖ҌbOa,Hڜï6gS&+| bp6d_PDY9;VN._hA%> S#l|5$`gv^z<5$ %q;+%+>ےaؓfof쒤0O ØۥG<% u!9.bdA+1ӎ.nÖԾ";' 6cQpULm !׍a+KVe5E%M^ku2h T)xF$Q`s%({zBn5t^AK9 ;ZZNP2IDS4bfoibgR)^yՖ8@:>#ȓ b%dP1IA\b=pEFW8Usl, _"ʒlQ^u-j(G 0DNt<_-l2f["iDXKڜ_jSm aRP S="H}MنOEIYOX@ZCpkv!/$T}JEp *4ȥL8މ0,/w?w?>Hi}yuz{wNoO %cȐJl{YS*\?nLMt̶N|ےdsOuuK\Zt{\ת:udmu&ZsvL:+z @B6M+dޣO2sZ8]z]M3B0Yjܭ_n2Us=uگۑ dn}kv׭M 1 KzD3vV 5+vBN.ݾQ"}o76+"֫H\s V{N{obe[0aN70\_HR 3we=#thjb PًӲ_hq rFAFoF'LCY7E97 jw?4:\櫜ј$7lᲱޑiR 8 38枛8Q01M.sޔ΃'v{&!YbcDM;RE/ղMva7sqK+02,Lf(+.^3=]E՘Kuѳ({-l1eP44TJRr7벷n.{gCF^M6GU{g }/UQm6@prC[rW|:.8B\BYφNndMً0Y.UY ERu8N0i$$\jFXg?:қSo=.'2w V!I?F{%)љҠ;墩7 MzLTX!ݠoXj{@9QRMxnޙ]o&pӝ\].Շ;n- 8Ry.),H> 81R">]f.oH/+xYlG/JO^|7ʙ)!.zyDk9އ~ zXMK.p`C/XT[5TgsUZE,v+gQ錛ͨrJތ`mH_8O`լBLG]gpvR.9^ 1gM$5hy\@;u'%w mR3x3;hk~rxd8E0id2\t.ĬsVvy2Yߕ0J95QICskV KS;S.|#UneZN\c%[5k΄Z#]2, Ϲj^aT8NثqYЀXR%X?Z9f̖ .9.{65#L.aEvE;G 'C)RxYw`c)?0ZispI(fٚєg'GL"sBlgl5;So-ո-ceTXzH⟂CT`+k]lwqg묮mtP̙lVk:_іI mBnJ7Ug2ͰaH:V&e9O'jpz\>gqtn)vm>(8fvdҠ:JM5N}oDF oZ5^ V!aXaY~&I񐛐 U9B3hcdC`S!+}GKuѹzR$A$Bi% 3@4a__TI7#-W-] `a"; M6C*;vj7 ly4j8E1IHECp6AKTd34:M* IU$"}6{59KdfGR#ҋ);)6W(4 07m[{`jMu j3#J,$xLnY {N&ˠ4.Ϲllp{ 榧2QU&W"Yg7xCp&DNR\?f`UkqG1yzŬ[q.^R Y5tŒ\iҏ2>K#W[)ȍhu/ baJ*Qo\R1-u&e`n?J0&YpJҹ&"&G:"oCGpMv9J녜d)煓skd&LJٳܩ+ 4sY2,Xv4l7@  UԖ*\֋-/I p45-yjB651jT&61mDF<!zg7a_[Ш'RQҜFۀF\ƹ7 [t(TO\&9GզdTB׵Ujg0݁Jȇ +&&,@u ð?߼S:n!5PSmAXDa'kqN\F::Eq7 wz79㶻A9&9q5GV6".|I6x.AEҕD@VQ^9c@? cB9jo)|8gvG*kiz#\[1nw^ؗCMuƬI\ rj_W|DH+4xltZ;!gl+Z -mXM z ̀hfRҽsDY#L&nؘ@&v,*]rr:hG=x&&_1H~.eV}ǫŔ>ZNSꄴ x]> MFBrV@W nl E%V\8g'c,-,4|Hg>oyPϭhcrz)pw "5- eo1prT~+Mxa&_%q\D\,[eDҫ%n!&{GәkX"+WDzLHOܳ Cd:IQ7}ъuSO]s7RN  7P>#Cnxn3*R3d}Вqy Y0 (#a@.؎Ox58TK^քْVlXf7)+uۜ/xYG7 Bgdns|M@v=(UxM`\RfXЦloj5$md3Kxe*2Z2Қ1VJ#:ht}}w؏58\0}A8^w |vg}Cq~+GRx+"U9LE/4[QǏ f?sh }z؂ n]ͫ/SFL2)l8!pä)̟q4g|CSĩ'9WG:fY(k(d퉂k80;=CvYSV7ٱpZbM^cPj_ipeY5$ ky#4&y$?΢`i|Pr.J M`ADAB>Q5?4IlPicí{eU+[͎Uy%>l+^Y`rJ 1?:7{!*noLuvpg69y!05LM&D- c#To)QP55FUU'*OIPHOqU| vyQ&gJ:K?4YK#W['D#Юr3nWSM4!1.\Ϡ`kyyn]66ZR](=v0v؊:HJ{JuZck4c0MXC۹vt-&4KQfx?y6B{p?{@wsǹprE#3۝"ߜh FYv\:r+L4Xmh[^wn+ 6^~|nM{nޡKQH|sN̡W~u? ۯviضOoyʵ}WaXv1CI H[,q Q$s$bWu9U놶=߯4D$i=3{Wge%)'nQ vCN8/p^\r`s?׷i3v#IhW@b뙙Ӆ,ԔYK:;CVVԳm3}K;Fo iLq#G/C.#~p;F _\4%7RUڠlcQkGFerQrքh؁ථϏΏՑQzy ]Іz▘}ms)W¹* @eELeN'𑔼-{r=pTL}Ѣ]\gۉu"M/CAS<h0N=#ɝHsgsn9-LH؜_H.Q͎2vK0]d1 ňh%n' ݶӒ-s=\/yސ퐭u#oAV/[@e`ѐ7EzicTyNC"C8sy7E\N?N^E"y#92TeE[YgF'X^H^ݍp$}o뵵GNJ30%?]?d8{ϿNH /o߼y)Ou[]h2׏u#,ruQ [%i`2,1Ț<,,J:h5kVwX;Y,uR s ʮS>xy9!NZz[S=B|4+e:{j>m-ai`I4Z": '(uȣӁ2sFūr FՓso_`ֺCO\s nM2xDz\'dxsE&ӰD5pi"5M+% \4LlaюtX4v7K!BE iRROڷjpy}!B~Hh^h_ پ;N{C괚L0 D!ƜTԿ%O*:"&K{:aiab 14|lru3kZavf`4n9K$զϴxy懈fJ}򸢝HBq ۊ7쌄T/ՠ|XCEea ϐ\_Y:I"xWR_NK 2֩ u7}Yʂ(p-:oP-#M֤UsfTJD%SY̼bF@v-։%6afZ$MZmlJd":7qŽy4}h/NөbJ>5g#<H923i#GDZxEhTUSlg,ԨZ J=k#>|=XlsYLjsc ,aB kJ Iǣ!PĠ6R)T\!A#ڡiS(څE6dHrr}vQҝNz1^_}"pvw~WߨDwt}zYϪs7YΜr))ɳg &A—Sx1cU-y>VCQG!6`Z|MU03 ikaa M&*9j҇HN$WW3'g6(:[fu|ВTa pm0dw-&\i,P @m}EZYI5a,3jZͺ0 @vmâmosu alӞa}%6zJI0t %[XwU%y#hJ13'm.n(_31j<pcҠ,ya}X_IL(OAUvl.AhՒ ´#lo:tC*@h˦C#)=?LGpw *^ɺ^ /(\W@P3+> 7’j~v#ٕc:!^Yh8N$q|Oon>Q^I <9=y?<~/yʼ/{*}~yχ7|\^*0oߤ/?JǛ><^^o򯟽ۓW/NOWiY>_\I.ϯ/o˷ory_?ǻǻ70?ބ.߽sp{xsw׻ǏOi&^|u}ۿo~ǟo޼{=e_>>>y|{uWv~˿_7?| bH~,(3[Xp}SV2e*uu PN ^Ϙxnurz -WsmF8hQlrhGev]|.ơav} P=c{&n 'zLn'Jf]=}J0\ P끸|]e}녳HÑ1hri豚\Z_'Kԫas6v@=~60z^$:yΦO)q^^l/k,j7[NĮ)fK$$^FvT  5Y[~+b3XRYQ 0EU}oɊTq A `*3)]z~F-z DV*`6Y /vWc$\_U nVb$ޫ,FW[%9L_,tƑ7CЍOVW{YN8r9$9 XIoǦqj271 <\?$VKؓ{x[UD{lVnh}08L ):Y4(+ J~Qg8_PIRrx6ȃX_fyLĚXXصAV">X5m'Z}tLCz_&+p[nϸ8#^ 6\ uYxWU*-.`b&VB>6Ke&Enʃ9Q#QDEG`m:V'rC-r&`Uvit nLVN~6YT|hUE i=d]YY!.Sϼݽ=/@C9:fDPP  ?C}J|Fb8arv``ՑnWe?E"RNv\iϭVWW~ l(Φ,".))Xz>ầue#:Nhmxbx4 g/avIȉ4vi65~0jWؘm1G lJMe599@ѳH(+&#Tg__[ E|@$+nS6NI; NH'bas*9;<(y1Oՠ~ xcJN@b-HjmLr$ZPUf j~nRKm%%,2-TÉ˵xrzrJ@&囧Xyq.%nsZ~[)bsneV:¥zճˇo)}Kg/>^||ǟx?o70_HONf~),?^Tӿ?~|ooiyӖh^n^/^@ˍ <DbSe<ǔsQGZAP-/s/"/(^J5j8M{*7r#l띗1a!Jgh[ޟ(N>BXavG 5)tWe|YGs)Ea18uTe ɢ]jPQB 639l0cFnb­ ˧N i "L)ł3XϴSDAN6/c60CᤝuvTU:(; l y8!%Ko|k_h|3 K#y,T JHnNV*3TmU+8_ij<)_P[~4h?6A+8bnOE yj,PUN1hJ8 PUI7l6'cLÇjv1leïLR*b?xAfOW-oW܈OK? [Y滐ǻ߿{_㛏>…祬 ,;UE"?AM0T @^l\b- bƸT=&(z>X@@tA5@: l[d|~)i3<%dLME 3@W+ļI|;HS [R$: cqIݗFD`$ʦb1| Izٴ؀ 4k;+@ʐw߽ (p2+8/i{4 Zd@ǛH1qlPBcpGVRɫ1\Я[fgyА'X:L f޳1zAwhtnuH}[NFtѓAcxCD,T%&'|%\NBH/Dk O*(DwЪN69dBSuBVn'# FK!dۀKݡh+j(_t, V<"z*_L xFT'A5ٽUQZFK"Ç g -Rͥfmn֋m^s 72$ZԪ2HKv`Y?Jk;5zAW*#[lRbn7&"8 ߵ4E 03i`YoqApUY\Nn2{z{TǯUl] Gzչ1:=5Zbψz4zzΦp: s~Gd˷$k=˭jIi8=f1AtkJ#jVD@ K?tjt9*;VD"/UL4E\=֭9j }WnB= 2h6Zq,Qɼo,|S]g~?(ϳ\i׌'V'C͙5@!3Ԭ*OoV4 V2_H@wm^1T9R++N>PFO@JgJ gCy_:' m׌ ^ \u?Mv-0=~n@~[KGyG,h>k5tn7' Nz3m¦ +ʳ*DCoU!ome;2VH};YkY.Cƫ@뜑ONO^?yO{CS,)m4m]M1m?b^ +ŖgsCɓO]`腏onr&~?'؜epu>_2QEENfB]%+,qbOY2J$d26'~8W)%+['Ul#ɭ #Pu[S"w.^%'13̚W"=/ňTP$kK%efd1J 0 Qa^)8N3(?Q˙TLg2c3|U 8!{P0Z ~41h:ؗ c.)vr2~=\3oR501hh_ո2PQHm/S%@~JGdXuCkp*^,LLc-d(}t)ra0BipH]<@O[yR^1i3(?I:dPy R!ƜtLz Gܦ"m{.K'Q!!'A~ԇ@s&0]8̂@(GO ̠]d@đf:S_A6M &M ( }bJo})hx)qE \x'*S۩CMtC~q(k1N"y@ lTbtS5ER:V܂"DZJYZهFWVER\ GIEeQJx"a(@0%\64  sHQ+DC$P* `Hm juMF)]wrI"ʂ+}SwW" T{XI0yJJ, E& >,, QR$%Ӧ1HDF,'bVbӪJDUn&!k!%*cIPc'=j3jK|2x&Qق iX|e?@ m XuhF:z#k1S3-V>2za d_^ jĂGкB z26 )ʘD{$3(:T;Us%WKf!v TGy-S,*Í9Q9@Dɱ:@b|r$΁C-,؁XQZ)#%89 :t??{{i?߽}DY=oeQiE:^/Csӑ%aW$o0TDAJY ĥlE:LBawcV^ftG3V 5lѢ^JrfǴQ6 ?.+_fMtQ[⽃SyenثGSq/J 5-q &vwt'CӳFmu,hCM\i)[wiv}(wZ\M$$<{h|o#Qw ź!ԸWd!u$fH zX5LPa e`}:H{{L'=DfL65kL1T>Ə0ADF Wܲ֊jG̬I[2v!4LZ]k-1Y7e0e5>VO e-cn)ԶPz0e'(y= ܭ!f+6^tnۻnt89w_ҍ)ln985Ծ8\'z]p:0kRn"PH͖ t:BKtp))vqW\g\b]g"ɬIbulh9nB>C*U 5^m[yc"V#ML `b+{ Pg=3޻˛.MLN\ Վ/z|t?x>큵=O굢2=ְi7tg,;ײ2? k!rxȉ~4Wz{n21c o;S+Vrr{tCt/cWZv ^q%J&͈vT*bnڡ(4殼@oIV'T{gUԘj\^Q*F4줽,ٻ r `2WjBGsҶ-,KYs{ #xM9(qWU%׈xE s{2`Ms ,(NW)Y?RݵT7A{'ӣUR-4>alŏc"^bC ؋vKt,pİHFmW@ƱХœ}f1`2oM1|8k{t%"X7W׉ |y_7=todzT DB$YLKh$n*neRK}}T^ǢHc0Gc0r]6B@He? 7Bl{R-@1F\ T"11[IƷR;S5&9e;!pȜ,k2%'7]48Brs8OQG܅C/hBWBA܋+! Pa? 'cbl"q9ZGdJU8驣V BkMb+K)MO>#*F28t531"M"1Cr$\P waN翀 ÍaPhꃶ"3ԪXՈ( ziSȉ}*^vfHǛ>q%n̑dJa+UGSNT0Zþp{YTsXDo egvC7(qqcEZm$0aj&%.l aDy! ]P6c‰;F(d^}(l^tdyI-ږvv̢bq|rKY=XH-Bk?d8\B$f?7Bђt+jFcki`xV,@S J?snKDbWpp)Yځ+KQ{MV*pis`(qM<7k(lin蚔 ohnvsHc5@PQwy ʖ#q͎Anr?r@ o[˞@v`G rivށ ]&*w,Dv2f .פLaS5j9dCI11KŽj;TsgX j߂8~N&~cĜY찷%ʴAylj…9>AQ噰b4b_Q=8p=sm4.t:$J_M42lie8֣]Fmj}i_dX>l?Աtp^Un]u) e)Uӝ֎=B]M^5VPfUxΗ.^`[~IJa6\@*&˖ʢ%H"H6D7[hI͚سahiбʪח\Ӷu*t~~48~n"3ZlDHTdC20a!TE TNnt=}<[6t[(rl' :}z\y-(quHs^z0ߟ(3U ѱt?kT][2Zz(uĦLX}&m7yT&ܵ{ ܖFXR@۷}.^~|ȿJHnʇE^Y/_`"rSn?cU7ۦ!3$T iM^4.:@W**,WV<Ql /)WEMP?\8^)4ovE1 XfUX: r+T}*D>7XKWjNAN&H>](B'" -`jN[J& .tJD+5M!BiCt ԔY:JA:jJ^QdLGLJ#@)~=UdT= 48@9FыQŖaX#xVG1γ#6:HG4$TvmkI᪃.At}K%PYhBI#~,|R _1QBp1#b(RmI"2;ۉH,Gry%Fr 1(a (_8vԚ"4bT4b+*d89<&M -4vVJb,:zD^#UP2\HusE53B$X&]A$XSBWQؐZv۩C1aDCLnգ&8V։<+ӻ-N 5cMej ? c<4! ŗorޜ1Umfa^QxrAT?'zuSCh3s*:Y33OV2UY~P̰;U`EIlWUu;6-OƜ/:\="|V\{\묆"/uu<|V~Oy]oo^__fso^//M훛w/˯_?}{Dݿ9^{yjYy{ Diw?Oz{~򛯾y~zw۫ׯe^{ n*߮n]h't~=1syWݿ.޼~w{_o:?i?[w_|s}wys{}_z~e/<ų?E_8k9*sN%oc.Y3 M3'P6/Sb$>|EC!.)<,ߦK_P pcɗ_|{|oH7k0KR]%_ ._Kv> 0\1K>(}Bl{7bu~ŎNlv7>U1 z!tRf]@:d+ºG i("Б6Y/+Q` B&4DჅ'w~5shIU+YYAgJ|HP(53!5~=js:*(^zp"Y-*V]S5:Zw 1/xG2A?狧4;r;[jPӃqߞNf]TԔ]Ā~|l,;EQzrIޑМuneoXǣSUj#4fC%rUi׃q 9R-`YpjI$Y-Q%m\^q]B *7ZR ,T R+,<@@ḍ1V¢H3nqV/غUXtut)u@1 aPK$!Nz RkEsB[CjʪLcd % 7[7*gA ";)#,șTֶ[O0BB F9 2<ԨggjrwuTc (ZSƃ_V$_Pgn#cKTa I"@\?jǬ&A .W-~VDC"C!h0.O͑3몃y{!b[' hđrR#NjF7"g(-w͢ǣe$,ÖhJW qP L )| 1!c\plbfji6qɅ)Zxd4Ь2"ҥ%NlY-:%< д:d0FaIwQ$2DQfg|t4 (6ɼ&\ bRMAۍJ>/`k^0A<B*qP40O#ggP槱G^mO%/%J5YəIm.F6@H{i)ި[֊rԁP: ۥlx˜dʸISHk"٤"Oͺڶ֊^I)'Gsiba"+نOEV ۑbzUk9fSZ7Qس1y'\m6R84򶦸HSG;2BQi (6d1힂+6^d!HpR}BO潊e^ԣ,g mX>d^(<Qt2ƖmUPe,FgVXwnGx0Q/jSj3С4>b\)JEcLM&a.MĤAlv5t 鹥kF.D[5-SD_x*M+@Sݩ$]ZBRZyk \X:7iQ5e_4.B[R+f#Bh_1* ñJ, 垴Šֽ!icdεM7>,,jv2.TAF9KحQ̅%LI-t^n>l*N[w̺ʤi]Ãb5ƒ#LJC,+.OPhhdfIORi_#6h%TA f$rS΢=)>gM+H:/6|qџ/޼uM~'yoןAkE矜63k0^Oho̩\L^=.Ya:jt?nPRŀrJ~X'sس*)(PkLK$b] r% >Aawz$0A rN^BGC.Tffgk /n cE *CbB'$@A(l7ņrv* "2r r3c(*Y L~1P[;5Rh6pSB6A4ѝ DG7 fi&4ԥ'mݝJ peuVlS7jt!/,ߑ% fYX偸 S,0zKlZ_&EsB}k$x\[-P;9 tLg^'oh5N* [i+tIBN Vd@MuM%Ein&0IH.yKV3++q>P1 &xz Щ%Cbv4mÓWԕ9,\S"g|ڤISI؟д:X`Nth X},Y}ǝ}P쨮C7Oi|ES%qK3nNxo=Xi5m]ծhsP!=sv* /kRjqJJ_-"lfjI jxQR 9i,!pIqw"C?'6&EjSڌ~;^{^?} ?}yx{!a5-,UȎkPwHѻ5=GQ;3]q8:"_M9?lU/*H ;N+UQ!*%*PBN+"–($~m9.q쌕=,ɁnJK-IܘeLƆU[ZU\;07C\iyl_OYl_/A) 4:]H K+<𛭤lr(Wsx{`\?tƤYb/ە(!(3ĎUUգ!LJ) dI@MXEe#O8˘Ѻ^HXL ulTkwO,\"lp{Dc6 @7RDFCUaZ' 8e`˘ &KJ<=Hk񈃉A5=MhOqʰL w]C)j1f V ڊs$&IWXtspN&L6:6:&iG;C"R7)fy0&q?cFM+ e|!}*@OqcntM#Hd΅"`FžsϽ,ח׉Z&#AհA4,Υg2j6fglj'3Q޻j5ka6 FFJɢqJ[WC1ĪZ %PjIQ4̊@˰x],&P#a7u> JAy?ߊ./YcT $&eplzPsmnRjUˍÏcs0TaF=Ͱn:8 _Ί`Vt}b&X"]*6bv h01iqc24MQ rCڝA9LZS-> rKڝIᛦ)4z"zٲ1 }(jMD!.AyJi.d'{d"X$fMOBIh /0?,-ʹ~, KVVVouV׈kj_N͝<9tKsi򲣪{7t&ǮQ#J y2P`rО]104 /}dyz6 9 ML9 ndop=η?9z;Ѽ֚횞Оn&ښt[˸+9tZqk9d]6čHP)z 8ly8MjoOJ釤 ܶfٸ1;ZZCΈ#6DZ\X5x?i~%mv)(~֨F,Pݐ957_Kww~5SC:'\g3FƎn{Fj 0:cM٘}ɯsT ÇBz5;|ͤa܀TSi8FZ 7f}[^sH.g[ku6*~6( "4jXċjq^OzV3ٍ'flj*[ojQzW1T21DHr7\0 ܀khiܥH:03[cqiY5ԈLF M=hӧhCPz?DwM;7.Ϟ(l['&?waN˷Wo>wu v\~ >oC$GD!}l{)a$NW eu0e*AqJa Bů=tmduۦCc^hfy$sCO,v% NNd\F9Ijq aEKHfdeN!ѵ7-R a&ڗPOX~}ԾDSvsV>Ƌ&hڋ]YAsjbWآA.ϭhXŅM3 O6Yl<,zta*֦<1YEMB{< }_z[77(9no/)>\~sys=_}|~]˟}G`=z+k_"f#{mL(t$si Z&`qM;ab[TLIuLٸ8jjjԢp7[35' Tmm_JC%9:w@cykl.v"Z`lgMV^) DGZᠠh^.,p-M M`1g;57m,|1{ `xffsC~<9͊g=6F5q WӒ2ZS/wWimB&yJ<~$ mD)N›&Or$gyBC;}mg`78FyGQ0l%# I zU$Ӈ$ؾJݧdꩧ^X%&o_~fgs Dig%_o}E_o /e2Q_֭K`镺Z]Km'Fe/|%:SoR٫K0:b$E]CtfY5kۇ&)A0n㢫O 핪L:uxC''/# +nnQ'⥖VŻ=wی4wFǕbY8`i֖J|W! ]8ְ`.nK~^:4;[.KW K՞}I],[ UK|5pn2@.λY '@[?O}bYۘ7mh(y\anpCnRP }wUrqܡq`DݠU Kg~ Qv\UXMUUXHxuOn6hLZYzk1MtӤـ*vEuТ! -;c9[7rUH@ߨ |FAdĄU\A(N%;M1IYaer:C:U NCEI #ŷ&Mִ6!m 9O\l4 {ّzC0U;GCT_(A0H`xx.yooy3oL2U'_=g_|Ͽ>-~Oo?w߾O~x/z~|_]L3H߾i? o] g탹=Oy||i///w/?W~~۳Wۿ?n$Ou|UvƭxA05 z,`?ۘsAge:K'NJwDcȧBf'p18zG(a uyGy]70x:s}7 zVٸe{ҳ' %2Gz6˞W#jZZ&xx iհ`(|;篺rCDD߁Z-:>2My==s՞ 8^BT[-V9LQ(y%"R^5-f@awfFt :]vwZ?ώ b~Z6D­P/?Yfv5NkH![a^-bĞ&`,:N$&a%Ycb:NQYw2o&wJZGo^wYdp2 lO^$s0#cda7hk v]삶٫W/}(l_pi|E:Ey`.Gz%q#;pOS?%(}b4ht٢ \|j5 eX9-fq'ø[8Y;YsY I%oPFr۰)].K"f(kݲg&21Ǔ>VΘE/|Q1uٵHqS?Ь]![ SԞpĆrbf.*"QXEjP4{{Q,ӛ,յn^9);uZny]AKg ~6+9jXwM%0jp"#VaX Ƴ|bPv;\ qAܶ DpͤGO(y |XRl,0mH j bҊ:g m (d|Lݤ+9qy@kOJIk!Q|QdeԇdQ%;!{qr&tׇI` R)sM{3 )Fw2\+vosW0oKԹO'0OK! ڳn͓CV8=v{X˙zXx>ذNROB@jV#aO # ,bGy+{ ;w+<8Ŀ $Dh j+b+ ]}Le`KtBVVHꆍh)_KSڳ{:|/e bțh V'udžN*S\['\s,u\ux~Vc׹*&@MRgfڋp8KJv+3<!N~럫p w\mcF<wp]hɍᡀkTF}zb/OT m9C3( RR@ל)U_PC  $:,/ ȥ&VSa> KdO퐭}k׆ݮ yLn-Fq L Yarb,bBî83[edqn)l{쉒U7[d]d":5ʞ|@m6 uRnC1^,SK/p\nC,'/c,{IYUTw2{ֵPMG _8 m#ŀHf#5YAV}uݞEX!֢3u;[}\s.zWbX-t+뮚]U=+E̫ǘBqЩ73cV6/I-"`cdi 3[˳^2~?۟7ûozA"b7?~ݏ_7/~?=<~{ɼ/?hB}٬_|O?_?o{G|_Oo7o?~|ӻ7޿O~X6S۷濾7?|KOx!0#rɁR]KK _e,,/F-^(~A"F sB۳nw:8A14w uEwu 8K2>g\.lhsw (Ռu‹}<u$}C2en]H}ت3Ne$ѢՕ8fim̲AbGꄽBQrSSOF0"IcM(+1n\#6Jw'[7\^ok޵*GZv,{bpV!@"L:Rɬ;ٜo%Y~;g y'Ylw ׵d/aC\=pbtdk8U'aC|f}tH$7I%۵ {̲#D~귇t3= `nr]y iSLCo [Qv7agK V=`pR-tj6 (*#d˵)9EsMQ:{'[nmg˵jq i7ڿd?AhA_zyՋNj^տ^xDSz??~7w>~ˏw?Ϗo?PW_y{?$a\ޔ/~6x??8y7?_~~←k\;|c}ύ_~7_|^{;ׇh៩NO/N BF?xxHF8O?-`VvzH3ZtMo^&s41p'̠nMál۪~~^8z-9Z\>ʭŵEğP's~bSY6N$m3|Yʷ!k2*D/Dgp̌!6]n~flEE-$i`]cr|C&b8Hcs!kgxn`;*"?'f=>_ɑ3@xj^jJ uIrݐE|,q=h9 slܰx8+Q9H'OD_>pR2|>(BF+ "W+La<;0?$,l)[LG-4| 2rY̾(jYJl#'Q"ԭwvV;GUz\A>a&[I@45!JV UngU ĭX68鶼8wuɢ=fK5icVppXe4Z $UVԽI'=8I CYARѠ]VSJBAM2&Wd5 X'3\ZVPnJJD/Ʀ=P靑4X˻$}`Fр{3mLTkSgǵl{$7@/(u%vQ| j'Cj"|#VVq=b'0]tdݝyДO;@xFrJ &aLf;VgIt%&0h+p3웆BbLn_ rz+jn/.XfD>jKƯ kt3l [J-$iV'9X],痏?`']FcǛYe"4{'T?"XQvBQ.n3 ^C.ɀP`@N *#m&Tj3+/!BLϘT`o8832Nt\Հ7Inm$ tY,|A,ٶ/5D"ϋq3i%XL*dx#2K xbx1J1smk(v -f4Xdlȶw2ؼe37n /vah0?ؖ)e,Lڅ> cY2Pxi fpJCi7QI~Jd.e # Nk@ J7] :. 7?N .d> qKま|y M.:2̀WC`[~>=Ʌ^"G沅Efoq|"* վS|Z ذ6$M۝ɑA$KaIABPܟZ,5F 63LN6![('CVMH0k' #hJ qcikUܒ"G! e"[ަZ &J:ZYT<.3zCu0G-cͰsIB_ 2~oY::~`HKVƵf05)PbE@+#th )UЕѥҒل zx|PN ]jdrPT2422?%ߠ!iO#C,0խec>\aO]-D,~Ƣc~ -V(0M +]$e=0mhږ!A=@u p!J[-wC2U05%t:IBbȾa2ADSgKX/R[)a@_: %<ʚrKcn}Rj0czX_ F(qs?^|sI"G4ap+v{;QThW`>Tj jݝbsz}ր@pGPg{0tENLlSSW};'Z7T[i EҀbPbPm'Ϸe )䘠Vc*X_zfZ:d@l_8b%-huQƳ&e/{qDyڪh4eA9/Ҏ41mik76Mv4\]F"]zxd--napׅšjShc'#B{`dZh2[4[A(re}R6Wr$ՂLKw%jU칒\`9Z<̲އ-q"qIu{u$%" .= Kʨm0_5e2s=T=h]^ל'3t>gKh(G1#@4eY I4ZDZpSAG3ŎsC4I:{?s܁̆Le'RC0G//1LkOʠia.D+8{Hy8]$v6.QǙM+®ʃtmԸ!jnpQnrAgZ(ص06ЃxQ0s09hA alvPr]P!>n,%Jj{j -)BF}L#Ђv:n {je(NL& ! @McIf7<#u˩͙8NCZKARF?C=BmE4sCp n]ȢъMnmӭ 0IHo@ݭrl:p!Y=M&m`[&/uᘁж;wII\A2 +K_ /c1hDYp80$2/mnBbI(`(&՝a}^wZ5Ķ\A^F2|ZK4K 兔#`F gcmagG3?{>FM(SÙ0g/FOgrr}:p{A#{w$(-M1Nh`wvAV8tMM8Wg Ha)E'l&,&!*4lβ$N! a`No7߸6vjI[xH (\bbZ&z'`3̢)%E>܂j8a`܌*aM.HUwṼǠ/KkPtj,tvl("j# p&HcR{I_#Zp-+^^m`D D'32t~JVT^'^O$3b-) +L%F&0spV5W@FB>PB|JRL5MB$Ȝ%h&ԁ(9%tQLdE4sF54IEEաNUGensIsRD!H'e B )a",!.&S,F3p,(D.rzj418PfKaiuz&O1Sr037ՈGMvۂbzo)( *+~*IPɫɾ9؃7iRu*N^$A Kuw%Oo%z$%( *741YU;b/dcaBu'HYMg(aq= ]Ju-^UqȂiɹ1MuR+]#gZžv;H=)~ 6A]N4Tz.HnvJ{x>T , +#fR/9MU"uAi>!]6!5'01fM |=ۜ=}gdƣ<  'Sp)Xs<)2"SxL')%bb7yXMx8ERbMJ['(55Q 1 ͎0/ͩ@M2/OҍFZsZʤ*eʺ`@Eo:E͏FLɕP[ E@wrҼ;n*Ř8AeH}S$6uI׵ݜdtMKɢC4mİ9$ځMk=rpcJ=(]KUf0?Ev;\x#28@7Ϻy%R%tuW4}WQcfX-4^IQɏ( [74$ q.А ڄEޠY {}Eh"2Nڜ R!GZT‚3kT6P7Vz89i&]pa8w5v$(oс3Q|p t-(R葷] T˕: D^F*9LiAV,|eAIuoܔدf(k[qPR/+[G&C!Kc3M a["Nf_VD" *&"Ȭ-bGo[LZLKt̂#yk {(,,b coFvm5SLy[ͬWJTZ8*q&^Zx]ͭ@h?Pz){X&F4 ls9ql:I"ۂAC6$"[=dUueJCRQi.!*fy)wm4+|rmX`̭N@}nG\`uНH##\Fl*}fH'Z|1= j8/\IUO,2x^& tO[ ]W<676?i9:]_V8S܅$?lܘO8fG'>x|ͧ>*?}/o'=w_~?oLyö?r#3E vpcۜ0tEu ۮ" qc}aps\{s6g}uچ&4癚~q?DR-\;7rrgpW-^+m{saWZٻ\+M0/Psk|jucc=;J]lջܚdv}C =BSDlw/]6=o2- 9)"cķ9j[/=u+Inj%zنDO?rvQ4vΝ/T}+;^YhX麸#KOCOJd ""ĸm6w{Orcގk?]Y |gwO۷][ׅ^Ǯ t0sfuAp Uݘ&Y@2>PCfg AIۧeݷnʊc3g zXfxrQR6(v`vK+6]ZI3,KKҲAӲ^%[-wKq,datL-z2uqXfX(*r8 mw`s9^Z++§]w=p`Or~pi `x\=r=İߖQD z6t= f8¬2Oi5H$9ߕtn;SׄU=oP=B4O;;pFͻDO7a|`7{ϳqF?[7&x#2J)7{p?CQ  -Ն'x:{[ZW5vtl=c2'̻sb{8a-;<=Jki^6=HQpvwV/|лf^9OS$%@g/G)lOǏNQ~s˿Y H}_]8\#q1!p?^r+??- J=Thmr7\92)'j7ËFS*|Es{}qo۱׹y-Wn{%ڱat\ gFQ=mt!\kRqy=r} XgAp\nT,1 mJ\'w`X=1ѵ!ӏ{(7:sҚ$|,KPVKE32I_ZKi #jjRC"Wn𽋮_t*;*̳lݐsti]!H.\J.0Tkԙyݰyd:C{PF+zK% Co5Ӱ f~١7n~=2|3CN["t[CzmnCaB[U1rUts4E=\fUpX!wMm?r𞋡񍂪54x0vޓtzB1h"1+G5"vH#CkڣC˜}hY,V>+ӪմcEoc-Ȭwwp4J+:_$Cꡬ$q}5TrwЋ*lnDž8Q6jCjzBzɢq ]6W*T/MF6ƆMٛ `5g0gAsXVޔs2쪻>Vά]ء& ߚ0:DP2*6o}=;lSu"pol^fbRSkކ-_r_'u]BД[%xUOR"!Az)8lᆲ2Z!;:|J89G5׼'6E:[o U*3Vev5)τBɂZBC3,}Y\Ǒ3}ܗ2$MQ0,#ї PMM{ ͈ԩdW$#A7$DH/uHZ٘n{tvL&(ސ*(vJ@G(HC2ڤ}PmƗIü v50T#B쐨KS<^#b^H;?´Ҕ) MiH{RxɺщWuf`Dk{C ۋi˰Xx||hl+]U獷J*VVT7#]oP88\fOSnqVb=si< $ʃ}ЍiXH5M \Ǔsm<$RDp;[ 8ҧѴe]h NWHgwybqtP'98 t4-br#ݸEb-qqLRbۺpHĵEQyR1 br pNX kFnǶQ(YX'9FC($I&:UJk, G=# 3eaOI递tHkauʕE2(ӟzuI/D@/l5" GzLzźM_L hVyfyp9jVqXL4 CJy{T5',_X1 1Y4xDܪlC}UㇶDJW-W y[Tz8m&&FVf3X7-rC<9-ɨ^,cJ޶ h7hգE7w4S(Ċ5(IQGbϵʐ"[jJ)+%0Q)t)ڈPCg@1LOMX[ r2m ]v+ӑPh ,h \i`?çWx{cD/?|/)?n=_=ں!ᙱw/` |͋_/~z]O`ަ﷟>OݟR7w޽w^߿7>z ?/_?|<}opo?}|{O~;|:_o;?O r92qw[´K'`UsY\!(DT#!oaZbpgZyrӢa9VWxBeE#-u p4nit{ eȣ2pMzŔIDNV L W.H^]*@ТcDiKUgcܮgd>W'[D Zǽ"znb"\$SU\yydO7ѫb( ;U-@UUtN+"Iz|V Qd;0o:^p<[̒E#gL8*LC&iH4A7Uv@L*=Z1E"G#SV#SHOR1atz =(6 Ea C8xrx .O11E?!;G X%*#}$&`Ѐ\7tP&JT2Ae5qkQls|0='&금QH @0Z.;4L58HYK:Ǩ)1(.Z\qظ2 y<C-]1 7&%"mJN|4V-(J]V.PȀX)zĀ'q2D94MGL:0G7-P9,PiTkiW|7'7fTl%;)!84Nї'iuU#,=˓m[xˑД.]ܼ5?@(h[=h%M6~it9?G~ǟV=m7o9k)wkǞa{sbKrw>/,u5m L|n&RfNSd/D X.qxYttHA;^QB@bZ|m2ZFkqNu3قM<<CL뻠8 y/Ddf-yP߼yZBܓ:8O)/ Cǜ "[h d*ںp߼#Ȳ.-N.R!0&mOt㛱+}]?%F7C^G#ur,xİtY tɊQ?9*qˮ2S2nf 7_ٸC%c$DOL^5 y]k2:|ًBrBV7&Mi6 fhdH NPa1v#1 32=^'q2d\J$5ɈBEsɺDJ:aufdEh7 JV9Kz2'<&$ E)>9Cg) lkO=]n2yd&FD){kT ܡM }N6ы.o[sG1eɜ]*;Q{}"ڏWKLǤNsrd2dr/0c':DŘ \NF]Ւ SԆy.uwH"uXIS5Hy]\hCn;eCWx`z@=b)%yUnڐ~w O<Llvc`6֠Pp [RMfF$,CJL*%Ԩ `J RX_ \(];ӗu@r8{l9v݌Nf:v8ƚzDB#`B ھos3wKOT!@]-VڌoKR <S6&_TfbGrN B00Nu֧{׏QNٴ;Sj Qu ;5#ފF($2ЋstJC8%h)Wf}O7943i>?=MT/,~x{?}߽} c,>OLŚl> z%N{w8ݫ1]XZvat?"N_Lťr%ȰXQ$3scjb%"XL+sneDE5m t:cyy9NiRR~&g-x{s2 c\ߘB*€bDAXe#u^QTK֣OUAݺd 8gwu yήVKÜĵ_8%h@ن2Jn5WaA2d%\mGE ] HZ^J`=>De.%3Ưָ=@WjGEVRȫizWCE/a@>|*r\xlI(7^^Vi|MUTۙ\U],P9W[T%vl M4 ݵ*LH;A" :N;F`X;R^Gzp30_i69\D[ q>~2xEckIy땰f.0RZ@,QҾʃ3/nJs0 */b039i CdkF_'תh6yA2ruƋ:#ڼ}j[`f1 =( M',=LTl<5\ye]~G];-l)KUk=כ^dⅢ=VcM\V˴,Pjz\2ԃCjY)G4}9&}͓W]YA٥wHLJO?~_^cNY~kGa7_ʑxbdyxƔ1y.=C'"Y0~ J%1k != IU4JI§Z#@XNo'>TF5U^;LaZ^FcXc:Wb6YRNqxRhn Ge5Тd7b".mGy# H}pN6gdOW@V QOqNRo+,  Y\S7f BG^uD˧)) /(V#꟤l30r`Cq$%+O*2Sg,&^+G>mn>L#b Y`9GNfc Lܰ$K9ÆP Mɔe2Yz]&YPԴh2Fߛۙl{,Ӭ =U{:օ|c>yOFPFHEe@LE˘-(Y˕JM=(y`EglC=%(v)V`5~!5fer֖jQ wKpO 5 PP &MӅZT`꾱WV*s6-'61X1vwĘ r 6ȢT0+D0i tvfcyE˼EGMFSt^BpQX]fF>y0`d4 ?vTɜP$@c1͍OAŖ` -zb2lRPٌ>/luWى;ҡbl 7O3T=AEk!]*0̷>$l?t{7sKL`A늒HCe9x 8sHdaE6 |Z}іvn@چDsk,"`OjeM0XgjYqNSyj5Ef T4~hJPjmcu!^2r$ebK|+G3ű0fͬRE]l}G2 0]cSkGk\Rӹ)j& s懊 r1;-Mjѣ/5ςoXJhonVeAr`x,Uf*+NX< m!r˥ R,g$֦qkkTN؍a*-ii~/M5 Hfhyz-:5 z+Y Cr]wY C\?~fnH ̑) a5v-]R]XCR%9ʍqx^'Q5*:,s;~M4|{v^eáN{94F/>AsEu-5EeeRYuK 08jRLǘތ}|/~1CC0/IAyxo_9QSa*ˬ k@p#S+%bfj3 Mo鍦%r" F/%rK I8t1a%)S!pc9:1xZTZ9BL1؇&$;6@n藑#= -6Q=Z:M˫.3\ŕųڪȺAg?:pù׼>Yjn.1X_6Jy: _fph򢀪#Si4ǟ'~z-nCjfdžRƭMΧV]"1*Cֆd} !uPYa߼*@ ]倪;V֎<_ |:0oM7ܻ(ek 8LWR:,:Ls39E*ߖV?v2 ܣ` QZ`g`J&]#TuC 3! {SVɠ$- N~HGnFyk.sd#8R QdȬ48h1E\fl^ CEqv/DZ }y|)C"EU]kR:Rn ʕφeG\C,{ʕl*ư]$/LAQ՚cj :wfLJovn8*f,\v=P|NMcTR@z.R#~rV4P\S})udm>yCOlZQ*n,,TYk:1|myPkꤛlyCoo.-F&Eb+&"B))>5΁|Xi\bK+X^!fKq+DmCuĄi?J;>MVu]ƷMO@ qc&l]l (qC3v7c@#E9W ^!uCz)H']f7z->/V6HU9NZkGlZԌ >d{{<O:KcRרtS(2/jCWl~3hɴ|NdJO> *4Bؾf|#21d,U8yT(∞wuFapm|eXTQΓ#l3R̽l-_6\&'4L1fGk'!l y\v OvÖ!(V68X1Ye-=uΌ|aHb7ި/t5s}ђR/ɎY=r݄)dR yxF&3VƊ=hr~cw~ǃdy>5emFw]}k!;kTv}<I:N[Ryt @C O]-MK) l- &hNEUb+ ?YDP^v/1t׼nZѣӔ}'lj^5GgR96]6HSCşz:]a)ڟ3]nnGZ*͆.e 9>5雜 xlϚ3|Ǟ&a2 y d[rbk6\vȧh\bLGoZoq!@c7˂b (dܺ+9^# j.\ñ9}+BpסY诏O:^\7ձCe{} יnH.LGwCyҝV&0]3Vw&k譹llØ{ ;Ѭ]cؾEٕ}j<KYI~̑et;_'_EOvwޝZ|0lI c]:#x5/%q(ͻ[?n=_=(?ӯi^q~Q׷OO۟vgj231T јd}>KZmϰZu; Q =^,myՌ3ZBT€I;ۂ Z,Zi:5Qn piߟ]X倊fQZ(mZAeXEpΜzbh} Jf6ћ!ZMٵ[n}rRgCs[ z0~ŜLu7;\V c*ëiܪ5~ʆ.By!k]m78梒Z1vj b%E8%P,vs5߆˷]!ţ#yM;G(6$&>?Lr0b|܅9@\y= lUp[[swS5x)cCr9Z7RuUXTavk?$UV ?['cD\^lߊYj~-jX+z k3GwׯQ/ 6!V/Fmh&ǖV56(sx"h4샼f[Ѻ3Et2o$"a}?+u6~_0֯_Ц|'!A_a}OW3#B?;={v7?K-ğnRߥ/o_z˷ŏ7^\~~j/ㇻ7޾xyU>.}ۇ_9)ozyyyzw]<_QV˛>}|%>ŏ߻~ݻuOO^Ǘv}SޅW_^r/wߞ7x/埾]?W~xMɳ7ox7?z?W&~"J:}a%/}g˽8/''J70eڳ JgBe%Jg֥/p^N*mτoZzgi}~z9K>~_')z}ee+ʳmU`d|}.8Xn V 'zRz(+9>/spV>7R/%7.~$[l¥ag.NiK=2ɪܝuYo$\]BdvBmt {d1$=!OP"źjYFr AF[/ IX~ݎ./`79 >ԍNDQmQqCM{ap/z)ld)DzeJ > + %>>11wyl; [iݿtYiKʩ6zI\V˰Hsi# E2kYJEWD]3d9j(?a=$xȺ荒+qޙbK|RjO^$cޅ9u7 }!*sUYA$9; QUHGe`aX8@mLzA,Q.UiifL/֏+KJA.y [u`Cy%+BK5CNVv[6DTqAx𹙃ʺ2 oF ̳ҋ[g$_( (2X §<_iaj$,LZ}L?l_01DH6 &J_y1Ul뇤m il^&j,!-;s i;ykv`2di[uyس: iѠb-94=;Zا91*ZS(6ĢSbs؉%mQ"ZUQlb4-[W<6sGSHBx)d(u=ŦU1x[m²\S!N.Xy;H c@ݶumna57`(sPkq[Nv2wGQIo+Y e"4xq[Y-<_CVRX=j-F΂c٩zኽp`_u0A#)$Ӂx7KoV1N? S/?kYZO{gͻH5oZS/1ߝRΟpy +Q$^0Dv "^2ZHz? [v*kdS<ΨP]ˮ ɤsm&)dJ)jj{*4P#t5p.WTٽ.f@ћj Hʲ@qad:i<[$NOׁpАEhtjC$dIaDe|f|WԄuenVd__7J Aֿym_~usyã.oŕ?}\psw/5?p߉I GvJe)+EiEs"_8vj(2-b^m@7Ry䰂>OCy܎,̏mi'^"B{SI ~*BJ,Pq BxG jZ0= bh/5G4|k.YZ:Vn[" n[TYɁ\Xa ӘGTu6 ¢V*N::;,ʴY(S;6ҁnUe RE9zb#ROsѤ$ư@Ŵ[K 9rZQų>ECJIffӒA_`9oϱYw]:fE룈b.ZoADsAVk%ڎ9achL!+ֶrj1w,Vxաyg@P\! NB]L ^(Q\[!:΅E\%ML9Ӭs6+u3skvVz'#KsE@ֿznϰVoܽ{wo3P?JUzII'թjz-$"H+@1NNu);htZ3TF/6I>&FfPljkiJ3C-`[ӅHS5sn K-s.L}+1:Zgz\*V- };Ӷ n9UΊYǓEfrrriḡ̍-fo*$QUSÖ'henΖxr$A{dX5?kN"9™dҾ]f+XE(,a"QqPn ur*NRҔ%dV:r;8CP( gLUS֓qã8TȄO?6s]pqgz^ l!N`dPh2Dk5}^3: f;e ;i~+]lZ;b ~_݁Oy&&[*}?ܬ\7ٿuF 7W4iӢPAO7 }*H|c$N)ݩ:6Ĩo$pDkgY jՖZ`TXI= 4LVF[)L !QbSn3O.Bͻ;)ϵX>->Ͽo~6aq׮G'PUjn0[v:EG#!lã[: MTдlI'mQgtB8dAmDD2I[T+v:ht@_ -\ oaSLr}RJF *N0B ?< ZOruOVk*gk$!4D:D{,e' l,TPƑm@iy G!,T:%'DhX/D{ꕵ JNȢ@׮IYa1'OtZE[He<& 24&%6aB2 DMn847_(IFO4ەQ (/]#"b`|?6u v#)3u b l\OSww]SĿsn^Ӡ"A-,IF#uכ| )ht4U3 e$YY" P@NniL)"[|dh(\545Fn."5 Yi·nL6%[̢M Յ32+* /Z1zL'U3Sx{td3%!7:Ew"4-u݂/\ЉcfYd5R[(vP~'h'>v5Բﶊq45b .YF' iz@b k k\Bi\7_b ɞW[3R] wb4&|j)HҘpH5xB<2b-39'&kPՄEoS8oi6 ,<5ٳMY;ixrXnI0W3DfRChhr?p]ؾ4$8zC]o{$U@Afk}%bIN/dVˁT&dR~mgHjé֦֕'ƈܓ0d楇:HfFD$Sn3TЩ' @>/y(!)qq(a(#n9Z3Q@ lШ fg biO᫽4OiQl4ĸVFX;A+|2p3}a0cC==&q3U!D}C4NX$dfOrJ_;nĂ2a1hOpOp3BLR=dc ˌ$I,O:uRTt=:\έFzBϟTk% "˖ %*'ab瀲sQ*vR7вEh(Rfb Va{XqeJZPFBLd- xz)⨬`řQb^!>>\gȜSKi$I% ĈpB(k!# DĵSVqƹpu{e}[Ba3tz` >W!S~1BLl/bunLp7l#WldɤYg_b6&^S@YL)ӈC eس~=ztN[t<:6Tw:(i=>醎g UZNl5+\G־.uWkI3]t C@S2aC5\-]סJ{ 'VT2Ƕ :c<:eܵ=ma(%V('ԲۉsLNt*L5ZJaۆ+*T6ѿJ@v70Ca0^q8 i#BVCo.w9 S>0q;-tENe QV=DenQ->V`ix5uf`5)i x;fw8f?֣-=!M<)4þMayڃ s4NacTN9ha>ߴxUcQNijP"+ϫP,v ZZ|l.)OͦlPsK91B8Tm;:--볠UN_x+7)%v=:Wx%>, $噕%ry՝:1I5u;%0VFNb7 ݠ`u3Be)p," X@ǜx TPWgJ!]Д9{x:NR}|I@ۆ *Pcu9aj_*7V{a>֬MvBiZ) 'N ƜeO|# 9"XW$58-8ӟy0.0dkN2@LASKdev/n$P+Ki`>A{Q6! uDP\pQGVt{a̚0v@؈*uqۛMawzVf:!>iGI ۤ!z 54.y\(fPYMюܫC(XO=0Nj"48I~–j2dd^bj 8Hl{H6ӡ?( ٛUP :pv&#тzlwL\5tsqR 0O&@ l3 6PRGѥhpȫ-rw OP =9BiƤ#E IYDXzv߻wFYRe(aF 4}mjSnesֿx\p{'PVH Oa~y-|)O-J# B oF{]e:C yFlV(P)r$A -ìIN}< yv-*wL|da;:{*4t@:Ig$ȃ8¯czKU)ѩ!N&^p*MABC.}[o7yt܍Q'hM0lM"-NЏr-^kW=t;]H[RI蓔',9pHNKsqI\Cp҆{/_'e¦ BD/L 2Q^ |_PF:+>> +.l&N\풊/* tы&~/غ\ B"N_HdMR,&xIkP ~AMW^CPޤ T}.kO0u*mQ<Dp)#vF@Iiє\|%^Rk<.}hdmVnS4Q"tYB"9 Ģ= ހKz>[mA,Woh py{,|ec׃m`\Kf'Ucb%*KIQ`*xgJx)W:J/RBF-7Wm;7Ir+qF4(&FAJ#,ݑPw)g" L/JIoЅA_>vz>W&)>4錉[;;EbI&“𡲳Z@RBARf*`vpI^И5CP.' fIo?_ͻϴB.ųgW7[v÷b]V-W^=w_?>o/_<]9>z{DyzϏOMO}Kxzar˧׿}N_~|Xh?=><~gz~ۧ݇ww}+.mZ]|߻țqkn>v7n޿yoo^^.oO߿9O/~z.6oO|(⡻H/'QuKDhhjwYQ*?+zN.2 !-S[+IfddS(#F?';*I:y'yǶ; c B21wخvv1LNE ɞxTDJ ^IzCp?U$WѬ$mNǢm':= 0}"cYrXZ1:= MIb$-IL,:\xz5B*R%DcSī}ҀF6[GSXJPW0:/*+cF%y B^#d`d ۫ep0fW(z6M:tha]W\`\]/ 7e)JT>w~=|Zܓ]"8 kj|uh@nK)F2[N$+:v-J%ɕrn+|v_F@s+[?tSA۬N #t݀?$ĀW%1=r3TO5-=K H!hBvJ39GRrݙ>܋o?0R[;p@X+Jp"D[]*G# *$#;Yɽw#K[f$vL.!G(~`Ad8T!7ֱ:kHf e,gŤW\١[mk6U٦!B" U McsPn6C40u;`6 @gڈSmɂ F,D2$\0ng+%1L+פ5zp~p?%-b39>stg`C}DƢT:" dŤh#OO\Ew?] 0MY.Ib賀 Ss]> 7eN\UDwf0c}@ ir;*FB*Hsqt8! c(f-xk 5 ~E؆MyrQje!pH`J4orV'eN/KwEqH0v5FSJ:ޗ} U C'wv}W<eP`b7MobJBWhTnz^M:Gٕ mL# 3ʌəl~!%Ho]ÿ=|xwk&ǟ^ 0J,(R]/ORϝ{zW?zys/Wozs}/ׯ\^?^~_|?ذsz+n?ٔ_?1O_ {|]1P#/w~aK^T|JӈVzl'r9:M59 BOhfhI }:Xt4`|$W>,R}9(@. ]`78H,U*pVx8ސf$V5WI 6`IHra9=>-ځ뢫H }u@VC싊TD9| }G-sj=5i8hG^@vU-Y\LY| Cy%4U5h {ѱJHF&2WL*7M,؀dRq~O\ȓby(~R0TY":#)tO` (6֌tQ;XhMHJ` )eaedZɡPҽЎ04Hnixۊ7{.C=h ٬ҶIԫf[ n.3T8K.RLxRQ* BTY(YP\Ch 6 bN =D׋!Ul<3fSeptqv|!HdgFLe7fЪa3tCuDWg[A5RUf]BJI7(N.hRTKEY!$De w/[3x |bfh 1P$g&0[5k$@6 ?Œl.U1ۘ.%m"qJ.%F{S-ۥI &:m;^}w+mȧ4Ɂ) XM:kD:haY˞BSLNCNO9D Ƽ-؁_)Dupg4hR q{yTH!+b&+f`aa+iyFnGx',&ϧ[-++1iPDsÖ6a.ؚ,9>dOF 7p|~s!;IL"(`CjyO!*X͞ $fK.<ǂW-$]Wk Qp]0as:ԡnn#Nr*G3+͍m쑌a^,;B3s4QՂLz؂J ECz!#OˊA`G \L%`1 ͮjqPxp2lV̱AjK=[׌-EJH=!'$/ĚJ~l)<v!Ш1 hqKۚmAWbˉ8ˬִہCJh,q ^SיcG$pP^$N(1<3[MĈȶ큫Mga7| sm\d;S&4\2l]hXepujW'kHb[! ^#'KA*aH(fSR$!ɨb<6aq$($3SrVfaK7MLZgT]1X$6RR v|YǡٲVIm >QTXcGyNȐ.6RVX6ge oΠhxl9(*S禴|/04$ad@;%`(3T<z&p] ##"=0jwrMH)H2$ wt3 ?2Jb^_,4sxmtg.Os.Ot~χ.*YY)faKM/.>O鹵_/`U،%!5 ˧áW{ Gn-rB`Nܨ4 uwCe&iog?26zOX 0AES\Җ ـ1a2: +t`OtΦ%upy6f{]*EPY .=Ad`J7kv:4Eb̮"M@Asrv ^ϑd0 0`{n-6ؘ$6l>DyRDG{۞VAr4Xˉe=bHCTN8L0ճCtVa*t,d߶2`V\M41p\l qc J+M z 8{=M:@@=CӁ{VD Xߓ;_Xҿ˅VŸ={cܨB֓Cn ڸ ":1L(5YT$8[ۺ_ϋ$㳞BkHJu[` NO;pX hѦm\[1/|~yQ"d];sȓN0`GƖªi6n`J;]e*Z̟LuС]r- i lX~ !M &)n3>7ڭ{( CC0xsu&`{):!'afJќ x;lFq%g8'H x{=̅W*[h #]*jTǂ`]bwC,_֍nE-^8T_K KlE:l^1՜Q$gU%=DfBQC^H&")D54WxtK0jR L8nր[QÈWiZKK$ILw G(D KKu#ĤddXT͎ækWaֈP, >[.qӢP`h<,.>H(AbTq*qʖ|ԙ@9A& U iJ 3m_-I=l#cx4S.MΩ9MEIEfԗA,Na{V_"Q[k0CorOS%`MB fAii(CbA.w jq H;їl4̀[y,TtS>} 蟘a'"*P /8Sٖ m0B" XC=;ndB́9vr1'kgq@ɄNJ<ӛtMf!ψWls:DV lZ)@+ ϭi|PCW0N_qLF̧xg XROΈ pKOWi +:ŵLH\)rUg:9;5λeVmtRd؏':0a=ʰ1l}U0EMUKcǓ;9D.ꑹaaV`~2YC46T&js`t6 Kî6fvkGBW`VV6xyV4z؛kd7_wQ˒ 9-&l;_=0KFɬ*מO8}[.,-RKy)<–(BEӶ# 6NGl)]W@pTR$= ŎSW lGҽ)~ >f!!I`P) %թT(Q\"e,T,V7Y"*'[a)GdjX5 wL+_[2"\{%(RTwދM^qT&FG0ERUR7 qA)aA8)>ǗW3 %dy/Z$J_dP-..gjge5,ugzlyӉ^nJWS|yCvQ E"t:q/. |1wɱF.78%M\*"%S~u1*)Kw@sBm8aS}aF-]#}{ נ5/6.7QفEp;$NT2#ӛ56hpG9A%j[YF~{oqFH\,VM0{i)^rwl6O1VU6l\h1+S 6TdydD7m9jD5U\R@x߱!ZN&p nn4Щ6jR%X5fZ넌9? DGAW 9xf9RԤVp7BE=_Fi ]eK@ `&Y/F! SAq`#k@"Ѿ&A`>J]ϒbu+ xv$c"hDʶ@Ê ?l[6m%T3`JڌNbS-A"$22<$Rum$L`e6"K"#1@^bfM4n/zUZFv4Q;cz4Fw;@t@,zdⴀt-VNJ\Bj-&zo]a5eH{yfL>?V9M]GeL)qNo_ϷOYD=^`?.߾˛뷗~zӛWo~|{}sׯᙸCo3o_~pۿ>z{YTW`Yc ]*4*N:BaEe, nj'sy[٠\FDEjBC '][oGv~V&vǰ,kmef HD*$m:U]Lwv9zԟvg ŗTssngNnz{~񥮗.;K;C~8 /4|.47gzM@ c}(/i~Zg}!=MS>;&k7N΅x&=-/P s>rnz/?7bg |:nidCp<ts>L/yF3q].;jC?9?2ӬXl4 Ц' d*/ eLGl~°6Nk^n0P5dL`"YP!M4PHX>||B}00ya}XmO%;9C].2t]-",wӚM7 )gCb3h $#KmNLq[m]4bs~,q thIՀKdCyt| ~)DaF֝ ؉7W*2cB2b'>2QjT3'SƜi I8FecU:ha03qȔ 0!."9@24-Y/S H[5h#yV5!: /؂Z ޏmz@1<##L_Xꟶg`DΌS'(%&ԉk082->mEћ,2?kVRl-@Jj"GZ@Lw-?1R=GDfraMNw(ju~B xйyv0//:k.&pNO 'Pq`UosppTz &Ŧ1|%?T[z6HKP q2o QQO6zyZIE@i`k E<} &4&]$9 hLU`|#d0 ;n֧SO#hLIo, [o]{ Dz-at iu)XeKzn7G[f:un'G&rc|q=~s( QzhlH1[pW$2-Cǐ- 9B(rоRzwu7ȿ>exUݛ۷ό/<|<ߜ΍/.}xpo__:˟~7ononoO뻽{{8xw{x>Lrs{۳Ͽ8=~zufxϛytuucӾˋ˯W釯W?>>#a_o^^.ŷӟ}W/{~jWNj˷?7ưI҃"1>Q{ rG}b:~k[׵a`xPs& ,o׶-=Q^HJ+5/0EdcTS)-U/zM;sx k+5mAft^*m`VV\xf&dN1esqj53 )&*X9Vx Pk1/c<_NY ٟ)9SZ55;KH[Vt\ ۃ%s4AYgR8cgs F$$8[[BVXd:B ` VH+ l3Aޚ 5ԦsF1hlhd6!ِ-b^1|4_/u2]S4e ha_ίZG3s_'b]5hӐ@>2;N7rBfvvወS)҉m\)`+uE‚Tէ*]pr5Om͂cJ~淚,㖥P,`!oo6 [q q-!8<\ۦܳg/]6f~2KelM>K}!暽y}朳ӫ9韻&kb&{Os= 4ӹ7pN=-yz~ob{a}|Ϝv~?>-ɬΫZ 0'RxɅ&^H:/{sj UާlktEKx]u_u+wmnQoVgOߏ$2 *޻|W|\SUٓl*F[Nc;M bq<ρ?Fh|]S/, 5*:9N+|͋4y[/ҹ{!Y-+'ݜZHyۤcOu!-WTg6ǨIEP+C]o-|he;R;Bʝ'h.Z}lO|;r䡱V\4q[h\^-`JPTE֎n1B9\,u O/Ϛr{uʽ,r#>RNqØxd6I*jM V>Y|Bl$kdatvj늶l\V"TobT7*6rjdTΖ5,V>5:(UFMZc:$V l# \*G^rȝ 5yKMe"">'N-M#173[T܂BMkTWy8InO;EشYR^(Zշ q$f\RnmY_Dzr/:!ʑ1%);X[nY94wM2Jʊ#BtoznܥdSLD{d۔ڰtYZ\SO7Ԛ➕1#'T~x16xg'wUf:mkL%`pzj5G;` vi݀>A׿И\C&rc޴p_  :X欺Ӫq59/Oٲ-:-Σ'$Y´-[qn[UoAQKw_揈ZUw,[c^s+J<"rGjԆ,檁Šb(-4v[ƒqܚYjR52&y<]neN_gJ6iHX&o0\;3]? c_ɘc[䉴WsD#E졺 @u/d%.{j!(-@ZWANMgE16_*=_ h')y xI:hrr~.Ch5U1UHPR9ҏGx~+ ڴF *kX4Tz454CpO.:+8* VE3ϵ4RR3V$J)iQx.'| Oы$}t 艚WREJTydnacF-…Lp<*Q[2ԇUw p  DDPK@1 mdf=!*')0LⅠjӆ{ղdr&)F"0iCC\]iI V|GA#;n ZGn9cD=0|:luП (^211dAm:Q5ry_c5&kvsZImN:lfG4ۥrLn'82lx, T'jLKF1e XNt`{yeCFD_jM,.LEqf!O3 (c0.2¤6}+Ѡ'\HPa732%y [l\_u+*ZӘqb9e)o"eU +,/rҠ[#T*ح+ .`%#9ľu0Zsj쌂r q )ⴂ6JeHSǬ6eY^j 2fq|dԞ*QI9-+=-NUaA'=  )@hl\a4j,S(\,h^ DyN+Ԛ S9Eͻdkc,={?)PFcnCQ$5J )a$'݀{uĀ P(-\CS] % 5^- vC;VK3=YLH*qMƜWc¥4+8Y `0p*dL@1'G~fFÞ 3܊π(#tߍQq E kthT,>PƤR5zWI{Fs&֭ܙqѶSi.a vOS[ɵ;GX18Pwn{DЂvp̓0ɻQ^lpL&Neg|4 .jzksRׂfɧV@Bƒ+rYWZ:sLvGu2 CJj-1cm6JϷ p|xL? n<a é'0Zȧ?u/RGn5EٞDzd? <2 $l? _뀤Y*P)UIό.v[!M WɹA/ӣ&]COK5>fp5mP%̭:+pv4dcU6IOrdRU[[dyh2yf9)l|69e4\FyF MfHc,lc aZdy #Z݁JEbsÈ Uýh"3 eam sApP\*vc!nPS Ljp&@'6ޤ`d_6Ά`K}4.i)mkZ=3fhylUW k]3k{6hf ihdү}k zVdv&FG" ^PghP[,d`U9(԰js{`46 fИH c³0Մ(ϟVR0&0zl2@O!,`tڛő:d;iL֪@2A]̤$mSm4tJŐ[Xka1A/  zޖUSY~Hz( i2nvRf&6u|[bmU/`= rjʢOp}A 3b HgBDܩ>@Piv (TZ;TlJ󻛇&efMN:6- !_kg._kM0ùyN}ǝ/Ol,i?>#5qJ-F'% BZrpJ-jЃ`* k:J0Z&(MJU?02>#[ XB7L1`s r^s2SB$lV3Ay srw +οOuOp$|0n2qSj9A;O,mdHZh8`0xif *p$DbH!61*!.`p%S,_cK?V_]Nir/R$K^7S+p^\gF.n,a/p7p`Sf{6&60FզVG#5CndVB4%JiGAM5 ĉ,K`,v~P6pEdK HMk.L?(&fh?x/2y1TI]Ĉndţbr*԰ Hr]ZFi2| *1@7hrYpV  *02QׅЏAƢgR <&Rш95m lAYَy8ʊE $gh-رUp8%XCݐ fM P=䞟IC=ԹdmʎO0хDXj ,O;&MEjO_Jـj.թDmEal+X,mnfZNC%>jf/ bpXΝ&`vCՙ"&9lsɭ]k&cg?M*a9 T~N>ף#2q+LvwYi]ُ Rw+s6ODs 8uGTG JT!y@:Cusם2MJ([)-P7"bnh7Ety3y;q%"jyŁ3eD(-fm1L{qs3 ~_\H+h~|`iT%r H+չSu, Q$r;9.x-$F_SYrdI{,1/+WWkVtDEUny5)dcZpshI3<)=><&=q}8W7۟ V.Ͽai[;'{(! ) YQIݼIeC׾3l7u乽?w[o*r%&t}&m\\PMs4lc.O/#6-a>+> RmxueԖ}ռ-ߜZ v܋屘a ܦPM:iq]'q 6k>SO_:nj^܍wŚy%־bpt@v= {R5鰴aMMZvmNwV8ܴ囆I ۰XFgdF-\Kv:B;.G5Tz)صGΏ̫} ~tSXM,ްyf%՜ET թV!fYavRO/RI[.l+4<Î *`B7m;p%Ho5kݦ+*WqO>i`GG ~զK={Ac7-Xg(}n=,U2TMgA kkme`D:v\$)V6ZMoyg^zs_3ӓSRhłd\)}uMrM{FH%\/4<֧= -Iz|X,4c.Ƹ/G~#߇U툄.2J}t{wݯ%O8_0:[ܜnt eiz֍oCMpOHL{p ھx;zA?  D6dA_:g,{ LY~Wr.f-$PzXڤ ׬`zd8POCIэuh)[TaFJ\nH_u6U)P ! ܸ(4FAP,+ra^3Z|`.e VM;o&U@($(?~A@uf0V߂C@ ǕagF \.QB'J`1 v GԢ0GN5&tcT "B02$FY@pI0ѯtZvvN+O87$G z# OE 5ɳIx91CNo`l`̉I v[i.?op A:8M`sh.͉q0&5(tZ"`YÂT]@7p{_p/!}A)odXsy%on/m& ˚E/LC9s+ٓ Ϥ}o =)}R2P`u*ki\cPaR'˹I?*. Im5 nRF)Ejt Zit} z6IpneW唏A]-;< l?5_/4Gڳe 6/?Mz "'!lwUoj?'Xî f_pqۚB6P@u_Ijş/>}tΞ~Ï/_&1}q 5|㻛_>=z}ywW/]^?|_zs~ͯk||pE2w7~z y|p?.|z4s .߼:_|ݫ?~|Wo__/~޽o6ÇW77.y ]a_w^O~~Q_|ó?tU7~<}_Nroߞބ?*uߛ_0J ?lW)Y?TZ ?|Oᓪ rs& 2^gfNPzv\|) '~6~9pE>R .s(1Nzfylj_Z -*Qq٬~NJ6|G(&DLpSi2Z5!--o=ǫf %BN8π3QH"9ᒣ1 ŷ5GxC& A6+vb]Zu@4A i#!p?wcܚ~OL/2*2MYNG>x;98|vG`  @7\9TuU;^GsD`[!1uPq~:~D~xEJVNlO H@%]K[@ų:\4n\Ѯ\K4 zyp]s\pR"p,%ѽx3}-{>G&[}SEǕ4HF vK NS?b55wUlTZYxb@SzD5;YCy* ͕4 dd/seqk~s,W]x"h^moJ(@~]*y@zFZHg4ڥe;/r`54x@i luPm (P/TGC4UӦX*g@oi9twb4= Fku1unoڶKeePuXs59sFC"-cl@,H`iƀf+)H.^7Ն?"GEAGzls[2X Hz:3HG^:ھIV*av5,n4Z##OlrQ}Gs]oH7'S~b $H58ߨmY2fXs*rpx+&R"( {۠ΤYj 7->;ׂ#|ƻښd4G=Y SJ)*jAXbRv1*$Ɇh4ui"ap? Y3M xϜ\Rƪp);s ofzl%l H]I3í %=~]1dYZ*vat=4m͔8 B+hx֋iNNjp)N)҅($H Rb4URԆ/a$>on ֶ6#gqT-r04(4*bY峳g/)ɢ]dyח^\}x(ny!0"Ċ'VtXKN׷<_= ~&v%A|'׷}w >}|{x}oLC巈%MMd@"gDộr|XHM.%Sl )+@ *M^ [p&]#7M Nn{wst<`3X|S**Em1uV*ʑnsgy"h'u*-Z ܺb3Yk_ЁPm]uRBq$.xpJ>e7K%\!"\*OZ+kۦ}ULVl`ݾ=.d1[!Br}NIwEa ; kaטy.6ˮu+2$-w8m JÊd|4@c[2n\gt~a.F1*, +'F%6M~BvսPQ/dXxAVN- n$z3t(lV+ :QwpVZGt;VXEE*"^;g5dQbƲx);5{H<QfSQ+9̟ES(]9E>i ^dߚT\ڪo>k:G`%ӆ:|7 \'&H HᤄR,Qko FVu@s'Z !ZMZC^΃MAb$&`S];T3Z}I#~[ q"PӦ]o|y{J1Zns'^``'ad(Z2$V(X(\"p"NDou2DIya EV`@|U_=ȃH8xCSO:t;1R&O:@7݉l^q-jU7v`~*&ix~k<W 4^2hf5۪$;*UJ@5RCPZ*`t'k=*3D:jrs=F{j@ 6E!^ :X!U5hNiAvK3;7khT`Rϻ',;fEâ:ؔt5>2eA@0MK8:Y DԻ4:?uZX85֒F5JNE[ϰKW w'؋fL)|Ltϟ1\.gÀsu3rŔs{Ϭa'fM-YvM$YEm fGaĭ!~[ftG6(pUyq `ݾ^¤Bc6Xse@g_R)70)R' 0+uA=:xO):jDRXem' q=NC;{ 8Z'9:Zm12aLoLȖCItղElVAr2gg.._1A q6M H̘%cWgLtP/ïCse*EvS'q7.>eīJ߽0fM^|30oMBIFwd} i9j`١@^.J0Uv|.‹De5 6ⵯՐk}n 3%R]˒VmLCSå10榲+xxVf]l}$R6d^gi7J8~'dJ9nj9z0%Y%$YaO=&s07 \UwYZ'|4)nka^{`(+a+`mI% aig.a&T[ۧblk̼M2od3s %{#̆ =py8W*#T6Ko 7;Tb>wGHZط%7ii(2,̈́șuzgFe,b6SԼΛ2F!p YbBi UX%*f32'TE*~O)slsI>mdY6u>]>jY5*Wǣ(&o$keR!Yݓ1=>-wiqcGy˿R@`HQhiPsY96({H6֤(5LB(Џ SI[p)w4![V q@ z9G@q4D:I^@!(aIEoeO6X&I(^vIюGg,WD@C!)0y,HV m) U p]XԖQ9 f6ܘM/pb WCE#lBh$e3fyfS4jl՛7':YBun.bn,&%u>4nt\+WM)hrc&V*W.', KOKb+aYČsa!_ޢ=nWmei"]RZ 9^<91m}-<{$FdDX(PG Y"9̇ * -gn(SD-0 =;!^ z}c&g:luDB7{/Ҟ~^9ca9ݰm<Р)-W4*^ste]K$JpMMq@ҹtHEO U""@D;u˦D_GO6h"/Pf[RAsdݑVjн́2ܑ{xK?FolR@<$5A<;ډrni;qGs`xvŜ-8'pN*J\4%Qǂޅ W~#W-ֈY͑RX"SLo)oI[FVdV KƙH ޕz ƍ?_؆ >c;xEJ{ ֐ Hb|).^* 4I#Aĺ&4RU}5D}Ƽtv'WHȥ*vDІ㨤]rҷᖌa~n6 F>ZAfw8n2n[ >+"+MMv^{y+iՔ[[Muy33g g ;-L uuv% Ǎ>@5u@oN.i*-{LgU8Tujj\jz;nuoapQ&7 ޯ -݋&g-WRjh*[L1NE"rBF0 ,l:*gVj =LV4w̝IەŠJ0N溎يm. ^Z'd'o3Ly0^{g{?>ھ,[xafI)(Z))%D[؍h{mZ\B,1X(9b>ܡL`(B%R͊t ㈳zy'oBsd(9:"VNr ;#lL _tUqM~O劘xC zQ='"srJ m#K~?L_` 2X:ϰqjg P 2=:cdia0s>B *yh{yBFɭ0d#M" tW%m&AkL-BuiKs  ȬɔTn$yUnhhO(U4tgDس,Wi!xk@%@dϲԱ šch!7!<(;VGJvɭYID|\6|q,dc9(k`B S򯜀v(b%XfXI *{bb1Y_:r\v`M>UE& ۳* )8tiT?Y{^yaw d|ҝ%3eQS$'4~}~9/!<~vf~[ Oŗ/?}s{-tcs%)??<ӬxjmS1[p~$?ooo/uu{ Cӧoݳ*iT +Opq N]r NŔ,! qpy/>2 w'5sƹ*B:b%I=,X#H}oR)`̬B9!.^%ϴ~_Of((1>^2"cHl )yj2ХWkθ<@qǦK@m,ظr?ҫtqoKae$Q .t4a+EXst#}q.RB ٰsXIo`F$wC-pAo5+ΦO͘;iP<`@ 9 c9?ó5*E1_9m;YaCΕI'*p7'Z$rDvO!]@Iϓ!O eyW9;afyP)r̜6ą bpQ=2ߓ9R"c dr\ؘ*F! { $+.x:HRiͱ=QW\j扏vti4q_aXqn1vP5JHhߗ'zt,tEVqn҈8'8"\j7AeGm%6YqR#5$h!!O@/2xq q2AEIń(H6|q<^C-=1(V0HPE\,<؃m9XeD)^,%n \f{ٙW"30nمEr!80F޼ (0BdP,!;d'd9kH??[Sq^>)Ͼ5'\=?R yycCeU|NyVXZ)_vJ) ၯs3`QNy1ÎY(Ukl InwE\CNGX咢myvMsʉiGlxCl &0ޥaS5g6|VqcQZam`#)7yjevZ Zؓ~R@wfyqӱJ[wt9Jp(pvYI5DŽ;Z;.h;WAz7Jq3;+ Vr ї֚}M̦efJsiYYFbדoUځ\]4 *%Uz$7.JF?TB %NP]]0ݞ<:ǫ&44zmAӎ&Y3>7پ3D#H+/Eʀ+l`-ҍaBp'3O4wlDjvwr1-Vc",-'Fр;r$\wOwz$OVO54 *溞ۿΩdd5@U4_AEfn/>K>+5=$ I2̀ GJQn \гM G.DAۆ d #Iȉ 58./`| '!ylbf`;1k)XBA mFFʎ8،K!= Hls!ҳeBC(]io7] 45w棡GZ,/Ef=쉓[{hwtQ< _G94=˟p:tes2e:~QguQpCsyTGiH:U<߽˫˛׏j飋/~4}v>}/~zח7g/.^>y_ys͕>ܽ,__?};Dܽ>/.~;\Tn~'Jz>_=|q~o{??|˷a7>\owWy?~m #%p~z}_޿h~}|}W፷/g/?>>}4|{~{on>\z_z2U_xŷ/ ~{q}grOHg#K?F=ۣ ƿ9Z=raxJsANĿAr딮ׅF0!`BYn S8|>,7t%qi>hcla>yC`CR}(CB7:$UnG?\CО&^?0M!C$ -Pч2&5n;2Z}i"rdu\n8@`fbdd3z!;Ic!JZIXFch ]]IQ(@C@~kHKXTėbJZy>@+8gՋțSNjcΠu"QHFXE#Bt%Km uZ,9a^Lt>:8QWswN`6Ӂ<ٰi%:N4Wx&R&Tim7hUcer7Th1HqDS\œ dd} F+~H_qM,I0kؐ&B7زDlIک v, n+I:A=i,iHIة\RxHY%CIIy'R;}%+粦$4 ذDr _@dM0ԛ:^}I6)n7%}(Ǝk,sVdG_US9JǸ4iWt$\޶yr5'-[LjaVˑDŒ0AvL-tOҮ,.lQ,`Җ`R+8w(FۘL.v\(#\j9)RxA0hB`L)i S=k2t$wns׎P-i:Fvh[\V2XynT ]W3-:$b09)O|TqH1|Sul!+s_GP޼,2:q#;[lyOnRh-T?2 [u)f,#Ujcf"T|T I0`P 2 **i۝Ą0|NkmH1_7XrP9O4]򅡰Sh-va2_ BxU݂yMUd ,y1Τ S'M3C=«GG/=ekSA(uxR<3eR-l`U{/xz.p{bln^]K6Zקd=7~pwoo|0ZpDrS L2KV {:$lus_g(HDv:C:_"C܂F!oS qC]Øä#8UG:Jɜv6jfo7ϣQFY7ܙfK LewZ+kzA OhEFs*ѡ-щ5eVVZ2te4 eqRw*yR0[WBE i;jpƦPJQ~.vy}ӮdJw-'DS$vh%wD]Lf|+;4e"%T[þwfKBO*Z_dSB$"oL6FjhfS;M1td=r] 533T6i!iBǘ,Kgy4H8t"jd 3vm]׺pr^s8\PIrEES?N KBIEF2#hD @+l) dWLkl]a[GƗ *e=Dt7DqI23o,q+,RTJjz,DȷC3cߑyruHEd/ƀWy3)IJ^(iN\]Ql8ɓ o}h9=!N 3vW̻R*I[}~h<ǐDZ4vIQb*Z[? Q%2֯mgX!I{@k |v/ZsJFkJH[}֞j8#?zrDzGOّ{-RKWiK2}c-.-9̖v$Y**ՈG>2jҵ|D2X9kMvWwypt-|P VDai#:rb+iqmfTw'^ƆZMHZJ fnd +VEn46\6VtT3(~lzRa9E1W0Y?{bYt4)T=Ѭ٭\,cq,FRw ]M[2%EʵѾVT_Tth'_fEQcHGJ YH}-$I*ɴܼ(Ů V!ҢKɨ]YrjP3:!V+H!θSskދǢË9;bοaҌrB/k&oPf~*NJo]O 6'KoL mc`Ҫu܄[ R3Y3QYR1nZÆSVlݭut4؟RWI g rQYp|z/ll׭Uպv2dxb[ypmi=9 +4Mi^1K6JzBQdiyYRPWa˟Hy&{ʊ*>&V!;}a;Cԭ;,=o~[ nC}EOgY{8|ɬ^^:Z+XX۴Q[᷂ވbm VZZmI|9h?G*ny~^iF}wܼwߖl̷?#%c~8oO\LyB$o1Iۢ "kd\z.Ռ;x]͈=Ej?\w` HinuyCM }p8 =kJqqSҢL i9 ^sdMjZ`YOӼ ߥ@ňuEɠKFt>`oS@r1;giJ$n TGY)݊ )$P{>< [dhTDKe8l6N6H f$ƳU}C@WͼEMf79w)h(N]$ Bv u %\!?k?XQˈJr PWLR PHu>FjMJN@Q\7B"]*ԔC30;f!xs'?Wp_Br!-;m2Y%ղ c.REb<*aV Pc[1\ 1@XLQITܜ'1O>s۪^ XխFAưSÀε-,F_=Z dĸBFz?[:^RkPy)|o?bx c&@{AXcC'?FJmAELT,1@tbd'䗙Ƕ| YFTĜ;!磾:Cۢ?AÄ_P/^H=LB=`-V *6 ?h˒|ArG-ֺ,_H? %dzogOg,FaH\}.: 1 j1 'iP;>D|T(+|X/IU]vd/5Ishб4Ndbd,T$NVZ苲3Cdil i~U!g`7-|Fܾm ^FD5#ta5Z[:a"^b>eGLJwGB!J,X(/f`"2Uh+bF47ܲ QÊm#*sTS+nH~DԲv|J~~Imk^TBYN%OW9[j|H~*q+H4Z2:^wʋ(cH-42НV) pAzrvuX8&2 Mu&:J{L:%\v'U j0W? d$cR%Z5T'^\3Ís 61mi+gk!͝kJTK,E(詐j N"ݔ{{GkŨP4lPr,L1˜G4? l͝01) .6XYnK= Wپ(s<%b]jE_"HVA U+"blrTF9 .$ߝ5E?r %U5Z})%lz06*VA `.ZB"HXn6{1꾹K0,{znoMGJPJL#{O89?e%b l_( c9Baqτ٘ J%>" +~i)@(CN`^ҩG1W#ԖIȍ%ܫ}Ԋ2Y34z:0JlUsPgwMUI\:cx*RǠ' 3 l`}`2ƍ:\_X60^fz=5&*;P*Ӏ, ]NЫt]b ɒXU4$JSJRf&pWN$e'6 $-[frx].atNppTh[Jp¤Шpb<Îzk0_VoW[ pĪԪF)諄21MKӀ{4\vxLRe۬Ֆ/W' >sVSR {OGͰ/H5kpy`.XyK{W7 xAQ^ jNV Y|a[FXb -wTloxUK @$FG0})f䎌p*읮4`(@=bJHͶp(ΘP 3KoJ9]|'jx!4K) %-ֈVT,&|8WKCKuUHd>tC s h{=\+)fRrm4<,[q1`|.wucK: Wp+\ sn9&~A©dsuߩDE='y.!bةҾ :C:Ga]`V qφ@ÈGhKdtPrРhP5Bt :$/i=!IQR^0S>U^0p %WS7XQg3 |N.>R~ȜR~IFxiN`9 ;3zD5=Fk1=oGI:h9l5ylRêiT?Jd%şll7z~S:Bo|: ZL"fEL:,!&<A}fpDaXNx 2*1w5dƐcp1SxL[ViIԎ* 0-*8Fnv ouCFQah&ޖ'ΑYؓ0Y)@S`H(I)F!e$eΨd$I9X*uT2b"f$`~6"%5lAW$mV i4)5G<߬.w1#W~~wSm뷿EAo<#|ſ+[KYTI*NMY9F:ssپCByxa 9bif\d *P> 橪vasǺ&8WŁY ZB J)܀yp%haU|z>TA,>(]?o?4TBC+}[oGx XGy eӀo-sgq)A{a?~3"R*+Rݽ3jPSU"g_g>>ݔo?Oޝv_|xϷ7/~0w?<~ ^/맧oioOݿ;/~[}}7Oݦ'>l>O+~x>p_o?=ܾ;?9_oҟo^W=_^}w~7Ϸ?}^ē7} N!,_JXS.| ˍbY6)Lʋw9"J C3h8|!:]_2圳Ђ!:DE!E#IʒuSz+܋t.W^Ǡ:HAIΎ>PK77ҟ=kC *RҬnog: VTS(=ƒqʬAb.8'P` `c9(.)NxⰨT8^@E;3>m7 /:8SwGx-,v|xss@s8A`O,\r*~6]PCӷxB3F_ ceTD97|i\>QJW,hWEQYyX 4z^ NK()–82yET+, fz}<Ϝd)Akkk䦦agg^d6X HY+Z#t"m5p1lA𡲦ER zH80NS"="hy%9 @tjcx%䃃Wro,XR<Pw՝YS3Օ@:Ed )%?6$w=QH<2g 30udN5%魘o=x nLy" aY6)ּP]lϴ.3bR"E<:TZ|aʀ S NE<"bo2ݕ" ,3\ak[,jc] LLqn&gSVz(\rGa ֢ab'|ebx.t5ɮmss+v\._oLsTȗ8@ 9X0ӋfQ\YLd" 9}le~Jd2@Ep*,ooGoU( #/mX<#sɡ^?.9_=‡B։>V͑Y 7UXYܲBrhū9䏒eڐCve  0GU){*tK2Pv@% ɘVؕc{UaA3ɾ K[<;eBGZf (8&)^)rCUSH\&Ϲ$ZA?+4.Җb ^TCե/f&{,!wWB 䫧;nz{ͧ_>,eͻo-d<&]Z?~Wŋj$i-{:!Y] uA'u9y od>JNY:ש~ - #uip%>t~`EGRxKOo|>g\kplAő,aHZղZ+2[;Ȧn}~P(aDI!XÍbqmHLEzV6 kYX ŭYHvWbHLJhhEvO!vO9Oɛkekk~~fp 5zH 'M|a π-\ {=qY5. \1M^[ס>e,Pmp3|Rik4 Alh#QFÝ+gRΉ9yܟ5K&z2^y? KꙞ9.sn [&6-mppjImB2##`mթ?ECM^/?t[xqV'-q3M#Q`y\kUϑȭSDѹ>ENx]X+ZЊ,oSvAwU"xIb:ɮBvD̬q'bCziw`$dIgzY?{bY]Xr2ܫQM0>d@0IT^Z6cE[izƗYj&쳾-ly@"g0 80s+i)KhA:Вw<kDbu}3ɷ&F|kLLxL XL:S<|yH􌂐b@G­ >Z|IrD1O612$NJC[iCƬZE \PfMR,]{ݎRAmֶB M݅% ۹*6F֔ۉO[+ gx ʾmD%ҫ[g6b L}fâ~t#D 7 f%`vEPE$I/:@+K%."Q;>:G- 'V?P~NO챿=ȆVlVlBZ͊]'$-|!+k+SP 9+w߽$"ܹ1@GVyuŕ>D QO:4 ]ZL/USn6Ik[8#@y|o[vd[KW,4uiQ%٭jrfp%ɑṈ5?p,QѩgHAyF3{VYn1Y  X'ӟ&AǸ.IΆg9~S0f&RQ<t`pnFOnsV^am}%9Dm̦98u&2v͌)N( _{T^C|IN64JRkab.G0k\ay8IǶ>žm(y/NX$9\/Ϙ罐`)FИ\ #2ld+F!v5?3EORP}taW9.ArT5V@A 0c^)jY b*o|ph\䩂8'Jd@--hD .ZP;7Wk94Nvُʉ̡rˎeXŵq4Kh~юږJPf f+EB '[͜SA.!0D,Ҍ,ab_J$1 GJs 7/Kl nN\쯋 "TjFr*M+~W/xTP0ٳ4Ni#=c \8,˙-Cݒx,U嶘sTV\kܱ4C.w`hLlr-Gj2+K\.d2 Js\ص.62.R֠빹B Sb6} U후+z6wD+laxzFWLcbFz;Id3L) "fR愞Dr4vWUWCMdd\5EH"4NsAc6Qc:cgn'o}?~C\ J_@ӯޥ<\ӻKܚgnoOYSU- ^&9SZ8rbwMvM k射ZrKLYSWC-S]-Bumqda iNxyZ: ڴ YY _]#:IhەbY0VamĔ55ö6ֳ@N'PUi2\mF6-Mӻ~4N u*]іL{BR±8%B/уIQ\bepd)8W68@ɣnC]%9\tCV.ipYpdQ^)j>^m{gWÒne)Ǫ;C2sVփ6#5'V'm?G$pD(3Olm)QܹWvigP(oe p2e(` lC(P۪5s\!1PǷv\N+;:QW}Y.VSw"{ʹ~'(^J FDYyOЛD(l13| @ΛXKZ&qds#sƃFp;epaP EA( *Rq=Ӌq[+ml|?mY:aʗc=/)DeyrÄGCL]t̍x̃1^) ItϞ 4K[푚M7B~ Kd4ؘAWOyr^ɴBrVD ,T(̰K1`{*)nz&g:&:7h۞S!Qd6s&3JAS)D1hvbfrk7)/ڶ-C|7 حilD֚=SPlq`AaCms)~f^'@dtnB4.MLk tb8LYbr8u⫄[pD &y9î"&Jb-p AiG $B=;=y8r4L#쨇][ {D=O>Ted`sfκ]zJ}'qꏥ/ɃSxyEtgk,/2 sζǬ(ގ|"5[L*gamĖa_ÞuОK2 \kѶ@ &2YJ5>UtT]D_UB H ҙӴxW5%fvH&hOƟWЦNM+uXy[6S}gS%.c1x}އ#S& >J.C6 \ P)M~Yu?yQ3\̑b<0~Jg2ٲD9 ʃQ<=A]9@S 1Z ~^֜w m:>#572+Z@t/sP8/|[nӤ/gxmSqS*nhS͏d /Uuxq*g!vLcdáJYfɘ=yϴJ4k2' XjF!Rk)ukYs`RTqjSuz&tKٍr,\ϭƗck_8@n; 5F\y3=|n|/*<#Gڦ{C~U;*xpQT=MVs$ ,R]ǖ*Ddz޻Xqs#EO<~FCfzMv ܔ6hA✑&LC $@q Uؼ/߼DM-{+pM~ٸ/qH_y1wOׯvjI+'13# L.;\g ^#mn b/3}2[(i°b4_ItUJ,Ed.l\4M m1tA ar>sOۛk&-CV>E!B\Y lOv}N~ȨkRuЍp;:6/ФnA?yiMw>oIu}Ə5aWzU7>ը:%҈m{TˤCijEB2.JZ.lvtE'9EK'TBv[v4-+jҩmouCnL"[:vYPw_7-jm5vC|3~~lPkkHiFꕰWzFr%ڜC߀qR~[M/^l ݽߙܳ݅ŹGJ7dc,\mTWh~%TK'/YD`eko,(Y]AW3o00pHgn.U2'Q͖B]̠eCYNVA]}W4tñ|[ my8@k-sGU 52!l0$vuO{A|v3\@8A)ƙ@(|&H,C ^{X+lk`֭4cΐԋ 9_H`c-KmAdh3 ydH}YK'b3v`j>S°1fm0{ʸߖA8pgEgLb?Zװ{i #bs1Ǯ?H h)t”7rcjrp3ySeGLnDM;٤QVUJ.-w*{-tb[tXkC颵f)ӻ{fX9{[ M}/R1rr$閟q mEKT)21,,lW-mP:I!KB6eMOI˵薫ʳm 4 -` 'KNk"_MCLqq*DA*ۇa 9g4-`ҕ\tC{0Z|b:];4aCLa%Rl93%IͽJ3>ȇq, z޶Dj"݉vFYx*Auy„&b.ޢ~11ۆķ[c@k1gs_,#N)z M2mTf٪οۘM& 4jP69U4MiE;:X1K(zH޶IlI-.ykkʮkʮb߼{.7*s2wUeWJ_PS|z_]Spu)A1oܽǛn߰Wۇwk,>Q K-&ε`N, nk9N N^qϘL735jqp0v.#klEfwOyc3j4ՀQP\''M.j 4-fٱ[)C,yQp+LpOf9(MC([juz?8\+^[h)BC &PcQ၏Sc^ǥ/-j`368v x&=лg^Ephuv-Xt]MN m?Ѯ׵~:3s;2'W{CХ̨vٰ*9CO* 'm:@m&tS$0WmOU6h_xmj 0 =u鬢CW;5nζ6&rZj6eU&梬`z]pHf,F:0ַim2i4s˲5MzZG/};o\Dܑ4Шlȴޓi_`j1Qq\#@~],8.4u+ᲅqƴ1VÖ1Ps;ĺj]D+!_[ҵ>H]TՂE­G%&GƷe-m12)嘦 d<\aVv@B/3Mj2uеO_)"ZW75]/qtq\MUv׉򸫺Rb_K@R]+6U8%h~We?5ST"<~@|EyDiAE2xۊʜBmjZxUEΑD[bmHl/u?7.xW}՞b~YxWb4.eFk ֡XU! *h({a.PUQRe'n,G[sazei@WftMT:UFټȰ 1N i% HyۏWOwKE>ƍ.x×_yĦorQ'e@k($˜T[jg:_ sEo!31-%L?NN"_W8sͤdNݰC2JN5>vY;Bk ڎIˬ+Rm6?-P1haDKq6XG©,X(\Y$&z[>Se dY$ Z;7]9Ysh 9D"Ql5ȵjF1cНPbZ`!&Tk9\r;{!T 8R<ɣDkE'LqkƆYgxnvɱf?+-4 dNjgnyq`v*tT[s4}jbBCw*]Yo~D. ܀v+KܚPlO", yRPNڱj%Ͼ|g9)L<'-NƞO,_B83cJ p '-OB$~'`lC8Xxi}22=cں3%2)2+%g-SzʓfFrB@hwpgA,_|V(!-, mV H ma K 2]$rD,C>wVdUiYUܷv)7>b&C&'wW|}}晖^+=|v_߾XΤt8Z/.߿O7wᛗί^>|x._Yyy绻w*,7n>~~___|x{sχoμ__>|<^zCs>_=ßW۷7o>]:}w >ܽ񼻳__XTٓHm(j_GQ11x H:[MQ$aT*KAtVhBWxP<LxdZ^!}B͔}tMI̵ae0oGD3`K5\<{T֛'iX2>˵}MnO8+q%M*2`P_Sssd$@v6,]߻.΂;\mi;]uZFqQɩm'hg h%&W9—@liF6vӿQXY Rc~J:q@\yؠ Oه۲TQX9ɻV ~"\BvAzq?ݲjXV`,,+ o F/@j_ٻ -P`X ukHphUd3ȺPʗ4XE KU'hW˾Qr[P z\IQ, e[V\3ሯeHKŦI>l~4Q4D V[嬫frls#Ppr(w5&J a"Us]m*5#1gMCȁ+2ǣ4X8J瘙]Ǭ †"vk M;Kf%69 CӮz>:kQ @ &'D9I4Af 2L5tp݇_jRN3ɒe,LZ˯>]"?=R!⹎g>Kg:,.&޾/?|׻7oo7MSN¼Ӌ?}~ݛtѧ%5]كY;'IG-1^;,^= qˊ "9WL'4##).Q7 zS Rl}a F#l0P 9V=7ZiB蕝㊟Rd#~Bsa8Y~M‡LG)U) - *З 02m7,* ã s0h6<2UcyzӅ9E"<tl?V'WŔJd2i.1x4~<CV4Y`㌃܍5C52>=  sJ_5vΑ7&7YER@a)7DZng] Ki)khh 5kd|o%ͽk3UCLhFN^4 BU`;XŚ`6yPit=ΚVY՜MxJGUb`YJD{JrC*T#nf{RECPzCvd =*S͂[^ fpOcP#zœW9G5Eh>U()xIh"`UB L$v[(KHB,PJbY$Ç\p [z"Cv;ɨPW|ƉHv͎&Z%H*'q(7ZZIp[-df@GbZUsO#0d ;VltdA&/m5Z.)Jpf+!'3TLI=f( v9Dʞmog`;֢L1S:p[}%YRıE*QpGj표!+eΞ]u;QkH:[-xx[)Ct⭍i)~MkQҙ^O:C76G..S3DK)fQ[ Qɺ*ZZmHq| ۀ(ydoؾ/q\X qdg`Eu\O;7's:EʅU̍pk皑MKNӶZZVp]Ui r!mJz as9eH$΍l{؍hvR׍l<(LBθiZrf6.,g=0{r,Cɉ i1[-T@Mu`eW TJk3Hb0: Q|%<-ف`$]IG2\mkZ?hݣA!N Y+JvΦ2]V01 :htT1`"\wOV%.WEj+'x)m&!]~ 5oݑ763܊2g I{er A*B2l_tRkH'KB%c8C IzGIX!!I |g. 6./LF5)R#pS SvgV|bw"Tذ_w,2.jm _՞a leD'/'KaP1b*'.EȆZlPC)){r jz2`مm ٰRBLb̴VY# U5I9nb.#P Ċad!^UHN֗5/-诞9Ϊ9׳j%So*Ъ}HCOhbFJvp4A Scu}T $`5ɫ8Pa@O+᫺3O% z,5i+V (ْ$--CghT F슱Y6=ۮ4U, ᖠG{r| ˍaJi9YM& .YHZWs v;^_sYr~~i3 \E^_jb0HF.3FR9.0&W'fkI>f!GƿЅ#4"0vH%6U@~)ZZ2]x&3_$)ܝz0Ptб| N[@!d, {6ylX}&vKR<9Re5@e UɌpyȌ0L xM&sDm86Ǐv]@8Ç}Npa NE8^홝Lg_0 >y^ÆI׍ H^Bհx͇_r;¦}LAKtmAvk-@dbMJdAcksj9Jƭy')]쵣 ]Bz |MVE(NUke wݞ'ce]AY{9Pjjg)NrU̅dU; 1>5='54-Uf6a&RGjM-}#|өQ4,t*B&}<d.tgyC+H g(z)\m05]lԼTi; fl ;E/4&C$ >CB{g/v$`Iz>d#ܥlP?cMfj3Tq+LEo׷gϕt \,>.]ߦ} >~&~&amt u%Rǟmnu5NI1[P--sSm՜ݹM R0;\1gMxfbm5\fv0KipȬ(tpnTgWU3svmt) _ؓeCxvig#_Mn&bTkZjp+{6U`xQ $'lӓ`Oa.c|MIeU:5'l`lFakC )kL>8gAɦťJCT#P$n%EZHycW;bc94:hgji'`0fX>漩 KņUyoly.[A!L«æ<13jlʭ(j&c7XcDxmy6>weڽ,{DW??|]9ًLwg2d: ljoK.TzsBgpJ e@9DYbmrAe%Ӄ,vnn*s?SX2R7l[f,"'] D0 ޘ2kǘʴr(NW5k5Ҳ|q\:6DIh8 }Rs@N͞Rf#L;%|ϰW__.?7`cV= !nj9|[1HNxU@ >{*dohÏx?E!I@pqw-1R54tNYL.[Rۇ&T<~sU!ywKVl kZbX= xS5tSI XaO:ٳɄu$d<炽y5\l*&E-rcPZd8cz4f<δZ< ,#/OĂ[^~fITΟqC Ck`/sUM<ϝ,zm UYǜbh'Ӻ?k j#(VQ1_N -l8Jd*ЦA Ї6hJ=S!rm72Vإ[~(O('I(~If r`Mb!`lNC\>yz\)?+sbc{9[ɝB N6-7WͲY.~_9 $ݢ.LO\9!$[X_5󖓌74CC;<б=><TB}߯ɐcc=t 'ab׳KשwAiwϢjS V]v YJEGc4k 9N$gW5cN "aUz GО;Ә^0yH:A"$Ü4 wڷR JGlP/ߵjHpFhejroyL% !sVPh0\u*mr@6&OW]78^yq75Ll,¥놕0[N2s&d܄09 ҂+ˣ%a߁Lzk>P}~ @O b Iӧ1!cNG,[7Y=^cK0%t/iy;^8̆?!:gG`C#8i5)GcBe|GNwn=32,'g̒qNa1,DL 9haw2[\Hw b*M[ٲk: (͢xيS]nm7-)TL;r 2g ~< ^N#j&`HF $wCkK3WSH Oa%B+מC蒄hA! #L\FK3CuZruT,8lnjڒR o#G`EjoxKoCe~k 0hΧѳ]r;0°RlsK_#7:]GkΠ @6X ށYICA#jmEY5 2 OhN1'iLH# DN[6a9= "S-'3$4nȨ͞ Z-nSy8>{E1`T2a ˣtq/Z?}kjRڍҮOJ+e-f/oBʔN?|nSs)-2i-~Uf}LJۛ^}Zy39`~ u\ &cm r_6Ƅn ImBThF(0G"QAn=d)b'P&Ibۯ&u!XMdf:h!$ӌr =蕃y4=fm 5|Q0#w$sN!<,oT ZIVc]A/:G{7c~ x5oFWQ?yMADC,E .!rp[wXwc(8Hc Y ŻIV V/6'+жO+UgLM q8>F"EybwAXa=k!haoIpp9MxeeQmIKF gy}8 .vňb-KM7ZMDᠫ2rJ11QdGFf ׺baD 6gh`kt`4T [M黂|0y:'?wvXf)k$ft[gif N2fi 0Ib0{B޶HlHᠸ%ݟk\4*F@~kKH26)%2x5\A T@ z-td |FWC HCS;'1[Idzj}=۩ICSe3ķ4^F6g\3R ` T>\Y\h8(Bq9h*cK;|Xj 3bjeu"P<}=lpa8“}Ydr>ڻ֡:E@Sn cAON2 x *|? C\ӿz|:P@ 2}x9iܶUH!/k"6[B Od+h ޱx!}j:g.]9Aw_F*̤ؒHD_M;JiC>_=7^?(hξ`$E = j@ьTHHgQo:!H:Ť "vGn⡗ov77"uzXPQ g =Ãݵwxn@ Ċ7`J>az"z@!FXzc(pA&t|06`` x_/GUloov7mM/2,GgW: C͜G Qnҭ޲{>L?besEЏH"\Bл~yg0 ~dbboovm̖q5[_A`2͂퍨4}ǵPAz#'+zUd+uD8|ld6Ln%n묡K{/?>ާitfq.u }nTdmv]>rƀQcGmhs@ZR~'.E喒+Q0 H:3GNRNLF‹Z dBBǡ-i c3ۭMLo-Ѱ]қ:}0FڊK7 b6Bl[ExnXP[ ,g[Oi$m>[@Pa 3jrD>w`ޭ|&oe8:3M[_{ ]hyEH0*&3 6 !\ $*9fJh|1z7BC&][oǑ~St9 0/# Hځ9${"8Er.}{}ީg/^}j_s?3:?uY{<׹HWץW&יYKu͟Y f.}N/aoGMz_2&9~/DNyi=oKmzN?iau:Wg6Ǧ~|&N[l>wMK ƹ|-w4۟mݜw'Wgןί{_^F}~F?볛o{}6}Oׯ?m:w/,o&ă,{M}аKs.?=^ $ dMSڥm|\y}7!d_M"%˄3\2ϦIR: e :"tWcTLKi'QU5K0m\!/n?/gY-u\UB&3mT)/А,詾#Kĝ :ˋ 1ӔImds8NH6uc<"Z‘OzQ.х鵜e,yHLظ~C媉gd L۽, Sr$6c:6EY[2[naN<|CVeޑ%67ܕj!=>'saƶǓR97@g qoXv᷎gezfbIcJr qD6[)I*ځvVZ]H/'N5w!͙덪Ψ-ڎ L'B'Y}X`zU3> N-zd,"1H013[vwi&oYm񾅪A;Gm2@QVIӛ Tͪ%bG_ ~1UԆ}P6Ć3o ";԰=FƼhbky5ݫ4|H$97Y@|@ȇ5|@ y#9VI1Tm+ J4ĵ7UIt$xHuU'U%=jc,-/tZpHҞN@uΘO^RC ە, 4l#ҪPHQ~UgΎiŖ*VV&`.% i%aW6(ߖyrp5l6 ;ŰړzNwMk,MQ*Y,ß+-SФ +|h3KNēᩊ;d8 m,EIeHDJxHʀ[nzZԜo7#gi^ֹcbZ9X _tJں4>lðW v"^z 3bP_50$r120+# =ݒ!-zÜV-l^OH'mCqگ& E&?y9_OW7gw=?l渜QSlaT]qm\U5GPPH#)YkdCɁFZp4N7x#uRU@'ѠEkQ7*+ݲHjy<+骘 y  ʡ))\St7aTSS8﫴Cre~Q t(>g X' kFM5i^Dh _lAEL\HKK0m@ >FB઎'0mMYQ yt `JDaK|< ";4UZ6%%B>#hAi9^t(ϘkK95$4u~Lk TNt";s#ѩjUVq^ cnWq#/JnKC9s^?S^Gʏ"h:*\!&Sy&ioB :;P[_"y+Y/z8M:r< ֝]R.H}A:R-ۮj kN`7KXFjN Cm 8 &41u[f9oi結S*,鸈ۆm^=$u=C"6;bf<8:jgmy*V>Ѐ~H (s3}چY[lݳ7Gճ98>53c:l҄A-NKo m|A(^\|GXz_,S)d<""n6H߃՟Dr}zTzkkV>BGCƃ"e]|ǜyIA`Yآ'4?5 [R4]FK[l:JO6` B(mY آBABˊdqeWP|fȭ1 erEnUj QN 4%zC#l߲trJC4k,.ɢ ,Pf!p ;Ny '93nʴ/:̈́V(B®D4( .Q,)pP sVgzCI(}Y3F>uld(Д.EY잆H -I4\&1 Qw^Q]eg0TSNZ7B# K $R]-m"?ZKo)?FljaH/CbZ sױ4&e`|}H `9u_XRvISoc gUozfS꘎0K 6i-Lt䑓xhiᤂ~<$R3+ x_Y#V\| A{V0\hoT%X(f)?ehK^&Ϩ2dgM3ܖ@lgU=&}\UB *M%APchieabuR$-Q%fmuJ!UҢtvXW&0*䕑/JQYgc&`9C~r#~³ݳώ !=W:oe} ;KAs~56]Mz/3:_*wO/do|8M>]]D)|}v(ýL ZkƷ}OV4/X >";c.0D`buho; .]bhm򼚣}жc\}Pm֣4۹a$=Z'eIjc(3hZ[-Yf#@:;FV=b((F[?ڻd%ly^/kѸy|GT}wI${pz|+uDen؇M&X/v=I p<aCɦ}ϻL==o)8+af@^Fu1KfN{4QA/bK|Y8+ӕRl&qq|r'/YQi.I q"ʺi{H O"‴1$0PmgפmZ"_j0a{"NHγ0U' Vҿ[tk.ۛ*GWݱ;ʑ *paL!;m\Vۯb㬧z/Q_ܗu}qo^QcL;Kk}tמHY'nȸMo#V%}{52}rt>QYk]+ xRS$zɗ/3-IЇak!,gbC߫ci-j}9[KRV^<8x6WpaFKuu'mBN2N'qr)o*}NԐA?nCP{'ӎֶWx[ӓѧdDP$lAM6V/e9+b( NjHj~fIJqzZ~TxV jb=&Xv"`]w NlMk!NU ,\lЊeىcYFdeİ{AZI$xs0=PК꡾ODcP֫|bZ(ofk.Gi^Zda0F{[qͳ9@\"Ƽ2(1 RW8KPU}iTmj/GH4}-LJo8ZT*Ó6":TJ,w>F ExqcDA{; PD3oWP+&rRs$"WNEj`o+P[l4CJ=8y,v9}@g?יiMP.!%r6Cj7qs>ϑgoOޟ_^o~1s'qV)Sq-1ykJ6jPpќBk)WʫnA6tHu|M"(d.k<-|Nӎ_iiC7Id P`߱? %a( x8ϥv-*C9=e-\#7`H́]L@_GCRj4vAN+#ꪟ UqSOd xM%m5k}4K"MBsG 쳼*֔j])v?adiHryyT!y5&4oXXZjJ?)E$`eq^p 'H,p ;ĭe!؄8TI؊r&d׾; tׁYBP=@`>*ao܇ U-Ґr:hh*`Q_V巎"GX$4 ۣU }҃(nn OOnsd V)~'8_cwoT<>q㞲$1z =~B} )>e%O󗣍ŀ _>uܛP_leO k=ʼNP%22;ǜ ()%^ͧL- MMԞb8)bht6|y7Mf#vھ0_ŁG)|LN8m=[RZqwxWJ1M$'Jc)z;EșJ);wJe8U؎o?_\^|xudOd,}?SX=DbK^!I1ۇScb6Ŭ=UrYd;@bU8-n/Hl) b7jOץqV~ެ_ ! ɗxxHGoᔲVz["[-O+L '@x i,n J+Oip=`#\tV(z26VMۦ,* =XM:tT$ͦT JvHF.|- *' /%Ӑ31V:˒i jbR0p@1e| :65 ~E M 2D:4ɣKeKP6/ K;5:z2\Ҡ cāZ\t]RU E .gyb#>"!))Sg ɝP j]obV->bL[5 M{Qh1A@B%BUcd;"+)%ۀz%+t'dD'a $ >T8f@W; *A8sPt9A~ /e[Y5'(h=#59i,US죘4h5dDAz:"T-!OŌsPKe|pfsh4`A;ّ:DDI ;>BgP%BfJHur w5X]z?5h\y`fG{\eZB,q\W\·'mSC&49g)BCt,2*v`Kn1L5 Rzw&X1*Kk!4 q1wVڨ/Kj:ZmٹNS*YPDlrc@nt/Rq}@[ :ѯ8h%F)<5D5#οYZP @50jEG`X!~`gcKkTl@>yY\)iz_]mpp͇?<~׿/^=}՛W0ѮO?jLJKzŗ}Ϳx?>~xgۯo^]W/|}~W׿|'˗\O_a6z )TNu:# 饽zؤĹ~s((M (6iݒ}-QԈgLsO d϶)zmH'18;}7np0UqyyS/ABׅ4 N4ila>4:rpnILwi_Bj/kkp:YAj:ARc{7(Ԯ,cVOwLFͮ2Pfl>Imve) vٞpJO1[vg!;|SK֎,:&"mww29 Vv5 6NZu~r?shl>W [-dUٛި*!2a({Ω2xѭLEEuXW0_Zv풄P09nTMQn\]vm x85~Wӿ$:[߽_-S\S9Z'{I^‹;Y5UPI/-(0}v2-hjk5Nhk~-j, ^jd8#"sq^ec\?/suR:ZKشx>osN/j11psG]w竍N5~0Gz;Ht=`=Fz V3qͷ*d{-=)=$vM6qZP24| g[*DiFR]{hHmG_VMPs4۸.)"SgD-xLvckoL>pp7ܼ[ Խ؜3&+ƳjΐHl\]!fWF|vi&$ǽGx* Nf_%&n^OwhQ@w:[Խݱp\ҙjqM f9?S?ŀh3 BL>oR<_?|>|zw}7J>8S Ӈ}ãR=Y//o|*K={|TS/_~o܆[}x~7}Nq ~۟{ݧW{އO?ntJQ毯)s!89_S iM;HA4{f<%8 h5j0aŹj2Khw hk P(RɂZR>ToO,3}0ZPmP7 e*,Q@fK@r"r~[q+AJ~sl6}gYIH:<[֙l 9JX-j}}mUti/kȲ'i$m#ilvά9W aBZ`T Ua&D -rބBYC O`X(W4}1?o/4?ZkHө(nF}=읪_(`lX˄RsHDzl"܋EmLmlΑXDm;n_Ou Blܢm 2|QMBL;B2EX3B+[8t1ʡdh|?mYcRLAMYf`UȆU,TNZd״-7zϺ> ϟOH!WXz}>yG56[cl%qʜ"p2-ףӊc4H#+E8GUz4-BPU4L͚QXĽӜª둆Y2,(PiTcفn+w+SjMoҹǿ$HswZ_poKbYb$ŷ5h+#y0Lʬ2, #5a8|P2Ap z:aΠM)1 >Ssqh;W6CDڬ5t=rtnSa 7@0Щ K@unz5WBX X ; ^W(TS pL02'UܔXF@Ǹ?.=E Z̥ý޳uACF; V[/iAUSᶅhqx+b'ltܙRSp+Q5 QC*{dgwPeZz1Jk[nD0*'$kOo+Hno1(vޤ?㧯C|vI :vYvdiUYv-2}34Z .r Ty7d]X_h;e4/ &R߮[4 sjD6}>]q 2pL3RNPES&1GH2GAd8.gHJXQF!Wx%3ƄS>w['!Bvhx^M~;Ѯ%GEQn5>Ǫ>eKe?mr:<>D_FixשPg?}/o~x|p_\,7R= ܡ/`'V@o)<)<IQsMlŜ#[v#ޤ$6o Psَ ѓ Eo&qL*_\/X"Y\v*Or ~[њLA4zV̬0ZYL*VߴGAK5ur>r)"ڇ]ov ?x626N}hl*isRxv2s:ءڞX(if6|_Ana`n g܂lbQG )L w7+`{liP׳: ] CFJOK&Mjy!zKZs <;p(o)I5f 1Sk}S~z,m[)]q=ky@ \9 ۿ]c{^~#6bXO;s[,ߥ 9ĶRm:Z' yȠ3/`Se%p7f-[ /-^,sA! D(Gjc8.j}ՊϘv3vHI,[L$wĖzB\˙DlyAL7>W̜!y_yD="pFu>ipVp>sU$SrPžWwOEc{?5N3Bmw$~5@LXdYEUh!Lڧ8#c.tț-@S4ূV>nu@1fܖ~:2JjMjjה=blD=Pˍt0̣~E]F>E48Ȟ:p&pe;T7-#  mcwq`^س>#JID6jaiԙʛPyܻ@we#*ۥEp4Uo,fjq2qϚh:liiHKuzI7AhkϪhQQpޮ|ޕԷ}ճ/~씇Ι?><ߥTizfxs){dZ>GB"*QNwgj_؋ y êb>VһIt Ĭp Rr[aJTƔE[s08i-e T #)P M(@R@ o y9A,nƙT;ԯRDR,r8ۜƟ,*S=U`O i$Bg *H0V5#{fEE(+UB]o"H^mr闓h+QE´Σ*gCݞ1𬑈|- ܢDG'mDaKj8QPYSd J;5D Lȭ4bHIV?UʢPjܒ1J5@!%28gDô ubD)s/Zc&ba)j K*P@7zOxzəe jesm'v}ʁ͈b'<&"qls -&|V~rH" yVOMdij-jP1N֓ޑdq˸L,ՉڀB=u;4<,9Oj/ՓmiuD9-Z/EP]Q"K38׌䮊Vx(iwZA@h/I{rbi*b3EV"F˕Ib՞%[??CD exOTJl^x,CH@tҫΒ+ڰ*hs¡OF+NH'^BRԝ/UB+E"KnᏲ=P2,9<"|l?T%s*t.zϊ[h.KH/㓰ʬ,x-bj؞i^XS)O,P5n;6FǃGQ7QӾ%K!>!-dԎoW\l@)uz٥b{Ǡ$DZlQ5zKƨa˨AN0n;5< r c[lk]`nRvvp{USn+E;<&]ިAޑ>tOXlπiP DiQQjR,#wA Q;^v[Jv'80 qб6Y:kwY" :{Q-904Aϰ0AHJāԈNQ8Rs {r9 ;Z%M)[mᙶ* R-a^F{ A:>䱓a"h+z=icƲ/vѼq%T=/ΘtmHZօM!#![Ճ3wd ;?Vс m_`tTK}ehYaYhXiX1Ya绘CYX{}fJ#F6NFz9\XL׺8g={y7b^`}'@m5rnkKCQ)\s+Fa{ۜ&lz ë0rcJDBR;oZWw17XYB}tf]\۸}$aԋ{pK΋2(+,}Yҹ(~֗UqS]pkNzϏio_R >;i&J1CĶT6.D 4PQ9P2k䪨\ ~Y/,*pJB LY%mحtjr3*R̶$OkVk‚4ڀ!ߙaee#W>Te:FFQ9(b3)X&ifV E\C%x/B+c^6AB| BR- P"馫!aH7^-hTțhn\^ݚMO>h޻TxiuJr.Ci<0>gߒ@JYa0D-d*YYu-GYv{)&jHWiּO+T>8\T%nǠ':S1$:S q0,BOՋץ1ai酼m LO߿rIJ!Ç^>MH[Gpd"D' O" )6A$"ÜGMgjԔU hg"+ &6 56UCgR=Qd*yYBjl}(}DO zb_ w]A凪.?-IPI~9q.'j}]S]+|td`0sHy,q ε&DY!"a>P$vU4TOGK5G͚ZړP ьgZ%  RÕW"`04igx%4٩jQaFcnK~3[!OņA$ \tb+/SՅԾap/8ʼnA`ѥZ(B8IXK;y.-^+m3` c~z 5{񂴧XOUe} f\hx웧6K p5$֐'5 S٠O6.MVod;9@f22>%jۭaD( mj#8=wnVD1-0}X'F]FWuFx_ ׇ/IJkXJ~9š Ud+՚ORюR߯N4Zb\9H% fvE]5[B#!~ EQ\P%aŔ׉CY(-*bJ"i< E_XoU)j T~?ʮIIw?gळ^Y[3I2Eh=d[Vj˕F$ȿgN̔y̔+VQ"52­!&F:L>V*V6}E/qgfQ1xG/>oRtAʮ:4/s8D#t{VEWJk[Z eKz*^n ͯ075oC.f1;~Ź7#pTbd| dd9CLJqY')Xqtས>kcOFC;@Bx~洱hzV5^;QJu?(/jq`a nR'6-V2 %J^QxSg&KDq8[kl P͖pG;MSos& +K/kRRY3qyRL2a/۹:۰a ۰ {2MNև^^X"2mZ4vځd]CW0Y6.,SΌ"%2Zi$ee;MntC'x xCwK[9&0C%_,7!T'*Yꗲ+79,\5 jcnVdSmR6cЫugN-!GP#{A'en$f\nD"q㙴/bsU HMz-y_|!اT\>EVn٬+QmJlSYɜӾ6O74Ѭ#.L<+IDB6St]EdhK jr٦-y1uR,#VB=0W#.Y3۲.{-c:fp';]lLX|&mB%+涎[@+'-^EW)tD6L}VLbTOtqLcXIN\ij6$`QzDG=[j;$R+qبvPPxYlrLMTb#܄TumuVJvkwKȨgc:>lz<-S- <|n˦6<ھsy;It9clu}왏Y7ƃɒUs2b'7Ņھ/ |L1.'׀ZJHR[r +134GLv+[Q6i/vaP5M\n^Ok1PSK\g/X؈FWiTkPJL2{2@ZZP4bրߴ=*KsDl<(^Qu~KY7=)v6KVNNQ0:9 He5Lumn<<ےm6i*K3 LABC.}[oGhKjm_< ZH;qbU Xlmʌs]YY{{}J{.V:_׊ol~Blɗ%z` V|gj7]r^c ohܓ?K<#y-aoL]v_XceOvO.\t/O..2oR;?|uy}/o߼|?Ͽ 7oLwn|t>hܿ)חwo_=S*S3._vûo{r7|xۼ>?yM^y"Owe7-_o?۟cOq?6o~bpD>zu:2;,ёt*D噲v:|Z*a2*~ڥ|Tl NU:5z23X|hm7i`*elْy;t~M`N@ՙwM[sϰuc:띲:? ^9 YTZvŸ퍔&_ﻀ)xƇ&0XE6 b^;xQ^6 |7rJeX-Ԓja{#WOEz:n\1VvtС?!s I Uxٮ:uNi|SQ؇3[d+m痌4vlAȣv!$E;DP!?sgΔ| zJ;d&#G*ȜSr[|!o�(oiZK(ͯzS E MXOkܢu;eC3ޠ%3v)Ձ">4Lcӝkb4Brx^jzR#D#m+i1.- t i\C\-A/<2&a70۔5{_opW(7RuADk8iGpkfFԺb2΋\o;W%&׶O7"W SA?,}H0mS_  t\C>!z>^)G$[`ܞw[BbD{ o[+OǦWܙB nh C9))I90]4zJ ]},\Ud(x,7B4nwtUhh7[= ,rcYp"Y`z((Qǵr/О^BAKZ"}%҈1 d0+d dGWGErQ ױ׍mx5sDI2o6ML(4 ,3IwX/J) &.MhTRHm ȝémSΓF"Y&,atd!IgB8d'#S3kQ+ Ahт jRm`G᮰"VpﶅPu'0jjf[xʄW7]\bMir18cHHZ(G jf:lsNAi)>OwP QS ~dF)FrB@ĬlB"26<0v<7 mҖ@ YxXd,4}ǰh`5X`0Za0),jIXW,ʻ5%F;Z{K(scs[82q[4=#jeB^1jjU4jB?uI[(B[œ( m[fOyX Ik֔I[SA'?ᜭ|Gsƈu:4Tn>yv!~0)OINB8S=%nbPv7چ˜6u[H!ܴ{rb7wC9ivi3Ҝ4\!|뭵K=^5|ʿz\_ܴhAq7o߾o駯_oo?'}ȗ5[D$уNKM\sp0gvnaA$x n4 ~iPX`7P7k7P XLzXֵ_$NIV$B*J$|}QMPx,$G~#'U # Ѳ_ݜUP-Va IU& 0JkDhdeMdp6#'(1o/<wABWa-c1"0l$IQHwaKZid"]-ۡbX3ɶ4Dl}'oA(f(v: IJ2!5l c Ԉ-+-ũ_UT(uNIQv5k:MMEl|[ H%m&>Ο xVYRu2Q&+#[L\oQꪋBؠ 7,&sGb*4U8_>:uw7-< TJ>zvO?+) x~׋C|-H||*AeO(ls6UW(+ MI&pn-YN{0ռeyIv.z. 6ɼ6I63E+ /!g|6j2TD)FJ@7\Pe=kwF`mcah-t6}860Lg$i PsUq)?WsfnB+#mh%T;Y$VxY?x v qY y(YQ ;ȠP&MVnԚze&qق4j6˞@\U L߅hGaL:2wSLYQ!xTvV\ҝŌDlIYg뿍:ԩ4~fHQgQy";Q%X"zQ0/3IDej`%"2Yf;'Yi^[䓢 W lRqL ,btpLf_ǽEld 9 ^e6e\m] R2sD- ښYt  %nu\)nnblA~ńfSقiFؓ6fTxWo!b@> 4ˤTw{N5-jI[osmQ[ -Gjd2.C0]K̻+B;R= P@s~TVDgyzǙhca&Ɲs& ٨3kIۨZھEHK0z:'g5 .ru\k@M% g -㢔>$T+qgZ!wr*q#4kY#&vaR˶Gһ3j6k {֎25B$&$l~եk,ŶbэcM( ŹR #t=/nMez LDɐ2umǝӫxہg<{/P|}3?_< := 3mzB ez~\yl7 ۰[S0ΘH ׈=3g5iªD|{jpWŲ)iʲ1OHr5i_ߣ*./\Ocf=ɳtܿ~swOo~'n_?nnW8T*؋+% ~r9I߽*W?z?N/'QK,ֲZVK$3X"y7 /3P&@_׆6|;Qa8dy=ԛVh1!IwBL @ڥ:߀uP@啺Bȉ $"w9TTSw&ED.(}XSd\b" @\y>u|.U^'o%׳]˵܃,>tي^?1cgi0lEB#ER H!s{` V삧'tС-"اOt#ClMUfi!Mt?C ٩5O֔sK;sьu3N\[O%MwXWVׅ֣3zDQ;:j" @Kb;,L_k(ߴyp>bΓE'\h<, THCN \pS@Nx333_XV6PLJqC CerTL9z]ʨ/G(F--x;bW^ O1G]s31cHWN"7Szzi vȔC`Ņr/Ava7j(lG0? #)w;K}"Lz X2M褎 .9 y}CKa#hE$`%c (r{'3QJ+5 yEM]KєÍGXjpSk&!."p{gx ,9tܵEJIơUH><_rwp>|*aDS7`z庬 %"̓ئӋVETjh+U@_oWlB;&ʘkՙ]l!= [TVXI1O]/ y/*2 rSAqnʊk8Q!84xKϨiʽ"*A Gp kCbkUi 'rS,avW^"jő;xw_LeiW7X'rZF5 BϳT5(f|z"Gy0KΚF)*≩)a"-4^$Ձ]߀B]nԑtjiB.DTˋ5-_ @J %T଒R`|S JpLȀ=* ͯj ea.RWR>?% ݐ٢(.UgŁA oڛ7/Zl9 j-AWZC.i,=S8M-Qڟo2 "jIvN+>.#t_A}{zr)U@Q~c"wk'q\謢j.l(媒t MK JJvVxUӉ4uA*{6]#o[čG,N 6Ț3hF!rO`Pn(0EuDjI tJWX#`V#S_jtPGXm=@EM`KעE; a-/TPs!SS@I*dFz}y2"M0S$est Y]B7 Zsp>l^nJH3]hk#[x2HP"Ba$ GS6Rԁib`mUKF=u,w`[EVe0Wɓrm &[F2*8,V\eX")T5Duaݺ,w 7ap|E>VűaBE#9@po2XHDælig'uXP9' )b((),J.v:|A,x}KYu eU#N.;p®SjFÛ&9c Ab"BtVtzR}[ /IuΌViue2Blɶlm@*(lZWc%FB؁y 5+RlQDP!\YB LT.V, +, OqAJlD͙p{uXѦjjhwTCepq.<*mwzz/nݷk fC̙ edfmQ-M.oЫ,\sn Jk7o?pܸ}0K&䭸9C|__ݔ\t+`HM.L9r*hѹʶgY8ip" sClQ*ڋP"^Z%[k [Ǭ3c˻갫=5[yhUWIظ iwiɍgg\.7ףߐ- g=&:l3g8HkzG`xJ)tl@;ʼn5$UۥQofnoP:{2ޏ$* 1Ѱ]⮄}Ap/AͫE޺qX='aVya]+<\ Q)v/N$fvbN<2=s5w\o3Ssg lU/kaM {ӨV{rk p>=:p~)NFpD+AƾIPig\L(dRYxd['лJ6@*`'r{u2`xY;6J$hpP?GyfBP^0U*K (lАR38X 1}a*yvår6-KIԘx$ԛLϓ.b¹\[ytw(1XyE3UtJBt4dŝFpȞ%~{nDSe fM]fa\MimйE i38qu''peSht(d6bRaU`b4[aE'bJ'AGԝ qA.T9R$kFmYfĘuC-Lw4[#ؠh1 2x-4S"_ƨI93Oުf$@IM&ÞѢn֢1 h9K9mt1gl#nꜜ >7g V/ +3&|{rzX4͟3E@:iH'_nnR|{LhgӨ}Hqu-A"!CNnAy!M0y=GɋG"F #N"h)o |ΰ"DיPR%R SR畔F/g_ֵGKe$Y;d>,8 ?㒫yWm.7Tc$ONYoN ׫t/^8]Œ!R~Jby$0kWH- .Ub>3~)N4A%a]!Ʈjr5;<؛vf0^ v6Fqׁ1L˂5_@~}lihN堇~mdZ~x;7v_o2χ&6\Leid1\u~ǾdUŇ ڭe8zsZjgw&JV]\ɓsA9nz-'CO vף]qn>2&a~8҃8rϵVne@jiPhn_c^",iRuUǃ|XبZq{UCF1ƚ s0vV=U{F6~;dVG<> ݁rT Gbmβ~tڳa輻tn;-5zCPwZ*T"ȴ w.5(i˥Tt5hv'U%w$Yl@B!AvpQ2,96ΣB X2Mq%):-l}$-mv==) $뒯ힳc[)oNCDBHp:rwNSUqq5]CG ʣniG$j՜0lPJ7ѩa1-[d*rB0i!P7a9I-=6[MgNΧ!]l=3ޚg)<ࣇڰDr *n\Qee{>8T9@G+hNZvCdmC0-ZxC8DtcIk i]yGiQOM(MÜ iqi{jӌn0@tFk"@N&zPv(p L`ؔqLmG?# bѵVY_ɡptR͉[XԀӴgId;LtG:M+EZ3i9A~E[q[㺠vśB*<;źӧQi`,  6w`-hxZNIQ%Ϝ Ç/(ӛ ~ȗE2y;.0]-r;TJ f87ϓaw6%eUIFiliqs/bOwx`np AWDY𳜉: as)$v<4wQ29÷S")";[k!(7X8,"ʸT3X1<@G)3lxUQ8]5 Ks@Ώ{KLNDIaplkDN57TY)z~Z&_zY 6!V(3ͼxb(m%e'W|٦i/C턶6֩2J61|?WQ==vD. 3|PJgoҎp(5ٺM'}cQΒ'1< <]l"D|p$OXά=l?GMB#A)̬Ou3!ĵ-6&m0;O^`Լg3[-{}}Wbb^t+oӞH6Ui(,󥩫͑(g58äx;}kϨCPJkA!"P;>GTo&-a=[5gg]s3:]%jJ7N}ֹ,: zyZ]^ g[Z^VBs<j}I–$jw7ObxH{ޅu p2s0vБcB٤>X MbvpA=3ivZ*=1)Bb2J{2.]{ғ gJvj,|$T&@78^deFP3c<O2:c:.ӿp::x.}KH<*{6j|0> ^zS~\Ttᥧn O;|ňי]< bLWu!O{jyvXC_;W)^іY5nhmY,KL$ O]gbHXFlD$.}lyÖȃDiD{`OLa` + *7aL|LK)_#eNὰיB qybm[>ۑ]LOE .o`S|uQIl(u=H] ag)_ebpU\: ӈJqvk&DH-q/Ĥų]rA4X8NuzyT0g*Km#Z6W0>#&@*.`Жv[WnKfw]"0.{!&ouV TPk(} Zh>7P5&쮊{-Ddm5 ܖ?L4|ϻq#UMd44_xq~r:Ei2uO@LWq],peTM6IKc\)(iK܇ꍕ PfVYXȬd%lKFmO&iR"1 b}%]ˎFkA*DĤu"FO6EMQUpz%h|Tb #B!D%: f;qlK9Xզp[cbطF;71Z*+;jd6kg!{G A/` HRx@'b(% ܦ0^pS9 nf=+7Ov%m>SQ}}3q^}gZOn/ǿW|./? ?uotto>}||᧷vOZû/?xIz*CSk˛<~wxr^Oo?]^o?}x/o߿O?ޟp)L9ǟ~z^隟^}|xGp_ύuy}gOy|}oCݟo~ͷ_}q?|~?_?6]߾xV"ePXHϿIvsuY= >O& I!)EbRAVnP'mLo0wΫׇD]/#^/O*~Cbs?*]Oel۞OQt}CB톼D֥mUal3&,n.8#Ҡ>tOtºVgt&t- lpy>< O7ڂ {ў.DN+o 1Iq_PB &L"SE6 ¤ɵ+p Mȓ2zD/MhQH(K)6JG] _bXѻ4( H^4uFR/.I<0J_Ud3ldNT%XyBˮ|(P2ӗR=euGUqOJD3Ev(lLHB v҃*FM+q.IJЇh62jE.Nl ( 0 +_% .q)*ՙO\Ѿsg1 ,#h6/5)Bэ[`ḡFKrDlD, &ԉmpg{Iym]UjisZy:%gXLYCCӧ )gm^ ɘԩu֝J**l&6&t{>Y zx鮦C%}jxL-!,uQ31uW~AmWo"_wW'b*q+J882!;l}'8z/EO+ fREdJ]bdWh xF+,̍&*?X<^e)~҉*Bdd"O+_V E;*WNhGvI-_3V6HiTP, q\BW[ 6m1K\Gߣan|(hjg4NmȷE$1r"du9;sV5eKE׃DN9{B,.B%LPcz 6QˆW.j&cPz,Iȷ6PzHYV6I{_TTK]yڶ\-F9b({\1Z`$^H`Ky,AڳoQY׸ηR ԾH#ʬ~sTHMr0`S;ݖa2+"Dvs!ɑ^d')gI!vYu}ݖS|ZݎȽ]W洄PSc4I 1mucnV/]nP^;bt-NũZݍnG:Nh#"uU @5uEhjjfS&LMn`ǦA TMvOsϢ/oA@=تucfCgײUCa,ZY'㡼)&bHeP íʰZSC\Z^hT9!Q$C h@JJGQ$XpiY(vVZ[}33'Rm0Q^Q@ VBhz+"ANoqXMYv'!t-]AsIyuKšv; ({jߙ+r$ԋ[,JEL%6^ YdX.z[u d_0-/:n5y\dRݔ4`DZ2=KlFy7dEȩ +kUCl$d,_lc5Vvz3`"$/|^)4ȞWI!V-/1' ,RITZT{ǠƔuJ͉`I`lXpr,-kNyYfas*Mk fλښZ%)dN#T$)^M>QmŶ>#W-&bFJye} E`a3aQd.S"x:߃ExO)!T%Yk" )e#IdCOsŅoz9߈7%w@H;:)ru`=mY͑r[ y* OZW%D )Mja^MI!dp.]Bb?ʗbZ]!ZqfY&V@$92zf=ZyIp JO(18 %VLl)iٮs7,VFOMq MnEKj(Ŭ<^an>mZ[ /% :nȵiO|y5YK j1ϓ&zfCضoz؃(-m8*+B0a?L-14Z/qЖoMZ ĵB|J״(u/Šw3I}P +cS݋z(d$ō%3sž7`$Ibzh$T"0> f71R+r^^6ƅr7.ꩢ{]5/Kra6mILWM[V{M _ ,WbA+fJ,2 ][@[%YMl|b)2b˒Q)^W?ϹtȪ?>|&IZ. r[&0@r09JDF E ,@&+dx@Z@+~k3Yk^r R [N sO3.8:ߢ3wV8w Tr䂦ddY`RỶ2h&%܀,|,v ]3mo & Pl_' 7rğ'w&AhdUd@r Z:1Ё{SO[`o MA^I7Xb'{EAjm:COWOk|m“4ʄ,-7:Z3 i91ը!>Ka;4{ -yhvCؖzaw ntlK-*@U4M&bKz'Ԍg߀ trOh% oa;jp !d#BI.XrhŮ,jsGH%0 )* | l7unf)Rm<$T+(A vF,'FݵnpBGI)h: U7^Ր*zc!3j"jtf6^Y:$ -U af]-O30uVߨlx \âQijשwxf`CUP3LXc/`Fx }vA`(lC IY!:-*M8wY Jl! B9sjt1c$㑅 qG퀿2h" s>pWIHX?Q aQ19YU-b6ZȒaZpa}CrJ儃UBT5 Rۂ4̀qPC"rdD^AfeS<[LǮw@0Ul7\6 8V H>c]͐bazP+ %2.*Hs n-^zܳ=(\?k8$ i%g տl% P|쯾-{ T*6_O74ђ~6"i9Sqt⸘"=BQŐv 7rNcbz;:Iy Uq( T[ Ӷi6CޑiY@EMNyҽ4Gin[7vzƟcAI0qT N"\,QpG5Hϋ:#\5#z!ɳSuػ WXUB"2ۊ%  +w vbu69LJك l3b}v0zך˹8! 96yÐ;#)uW.e05p gc^9dcL;s ,9\7`$SJLm@W9t!Xg΂uК6M,qkkš%X0c $@T"L)C2'6GѢn=ĵn -tALnmH=;+=={$Wȡ_n$/|nQ"D0\X_U/+)߾={"V zu% +: ~jB4c%MM,Tk뵢uX/;|5 QxA ڽJ_ q rlRZ>i?;z:wGERGΓ95!YA0܌v&J6쒒M!|EJtw>)z3=$M&&$莂EݚLrt59mUm>!')ƤYٵ@cJGs J{J\Rҫ]MC=#nyI/v:@ER]mvBl U؎FvdP= -+а~ mJ kUZc ]e&Nmvr;?W*W+GV.M\AM )lq+[GqqTr2>)Z"yR!^@D 8Thbb,L'N4N[H5t6L.ڳx֭ρVEVm+kev)WR/=K49sFVV&&9L2;A)EZ4e1PL}4+:"MZEXOD5y-=Bg:(us~/C4Y_KAx*D++cff*?-K`Es!Uz]L+huB3^ݸNJx {æPimj+Xn/2it`vo@ jB/Iо!e3L%I.kO =>창b{ 9<k.qbR!)K{dxkG^^A2, f9&sP'&&J7] ^z"gg`y624xG֚@ Ԋ=Q`.y uRfD(Z[tԹGss `&zv375G/tPï61vF& aEZAv{5f}dUʀ`tY tSAB^l fwY݁ٙi&m1* x x?AU|xBF!ʖQ0Yeh779GxIyi?M|*\~{s4yn/x<'33?9ϓb@^)g9Xx~@w*V=ڜՊX^v, K`Kƕ d ZީExfRjECqdV"崼tUip$7녠 `.N;~ GqaGЏ˫G=9oPoVj9І3)I%a =wFހ'2F.# CrC5(JTCrh5O5 Ėvj Xj|fUVWFl3X%с 2ƇH"..c}&~[urve;9gݓNurOo$<ړN8)9*6 wE&=E噟$!©4+_K-y2p3 }.+sd oɨs,1{T|xz/"Ws&ݶɑ<,n)8D*M#7u_ (Yr!Q`%`5>FUHz6'ao(A|DGt>ZZ:i넂V +NORlcΪu-RH^ӈ&GͰ.ĎVޥyQGɦH8ߔmw]ƏE*)5/K=h9V-ὡ8cagB4?N?^e #H \ϝPRG!pDɜrѮ|UP9h|ӷT>gDmTᲐ;:nxTtR GO|+m]aqTivct'caC\x7zÊHrǎӽS^ݰ;nC˘ALB`;c+~#G2:i[pULbY{VCs`*4bdJn0@5w䚨(]G\w^pө!촀~fw~⹋xV-lgH< M{gmՏ/wO|Jzc\~{i5n)xOJ>4%zGݚsظvfx#-g϶݀{|lxˎk\C'#\)b}kǀHf!!C3h5T vgX&i 3073vl=>C b%~`ym=J8)-{N>¼!rD#ra27l%i8h(h6adž( `vT&~fLRG-{xFd6 eL}.K6KۤϮC9 َ6RzGK2geqljƛ7sC-@v dhtŷ6>(6o/|{w5EW U f`=T8lۡSJmű9j{vh2Bv vYvEZKs^JcT*bgP XF(-Xڣ!نX/d;S!z_R7ax GsMUE^p$#eh52- Mڟu3E5QmNb痘/D>E)EA* H1,%#%BǞ v$t-`,n,auڸF0+ c!"ݙ.h`3ma{D[߶ *c옇ؖ5|y8#a^$I-nL@jӊ3w@o m0o`f*:T<a$n򪭩8tZ+]Y/ |G]ڦ о 9nqѓpz63Q|0C(z~F6+?qcы_(Jq##&,(ɽBXbM{'lS\BA8O,WVQK&ۇ_- f~r[}sl+$I#_<JRrZp:y#Oe ɜՓ/D.`Y`Uiһa:}g`yd8崖3zԠJ .Cb'`0p5U ,z0NH4R*LCeY46B$^sզKHu.]Ӷoed.H =d& ;=ЂJn?\Oǝ6$γasU]0T9 l%=Ј{JYݬ7ԛ!]:b=~vF}2}3iH`E*>K7YFU4K,ٕL-(J2:v;*Czq|2q^Z0M吥J"W/4>2bO$w>\L~dɯ?߰LiQJ^W 4IHl}N$9&G//0xzdbBĝ[vA@TEqx9|dU9zџ+ !"8-pC(M< \N:PWg&Ч9Vy'P?w Yi^WxٱT2CWkK3.0UID^fHGvoL,' ZOAo8|'E܋dIzNl{~t"ؘJ.nӃVaײs\wAj;%z] džQ# \)'bpM^Q6> .`aZV+lt8ZE}]xq}(opsWp4sP*9oEv;{% ~mT,mg"2r*,1{ 8=`fhdjtD*R],imv|jvSw_:vOyN[#} 6 $"}LJtՋ݉<Z͵DzBC}2}iDZg!y{_ E SL (Z& ZYj9,鮮}>_={ӿ\_|}\}U/<א6^ƫ .kW{5=,]}kr7ۢZW~/6|z KgcOrӫKm+?_}~(65]M϶ce83r)>ç(kiM}ߛfPp_7n6 @)sxO>s2<^\[DZBѱ3m7 \iyI]!i)۞6~4 of풒N]{{Ʒ;>"6%DH_Z^;0,t4X+j;]=嶩T\{!?PPo<b-(]7[7xxXyd[pѬ#^\M};U*ȾSJ2i9 HMk'SX/6$ZU^Ҷﷰ 4<@x5}Ά8o/hjߏN [^)l5p SЮStw) xaWD):] Z 5KSI,+r8T'm_( F%o&pi:žc!k<ݰm @),csYEkbZX;Fijh8P#ev>\@pE ^#bQCD{rpCHrV _;#aQXuz\ 9Xc{ۼĽޑH$W XJ;.&{ }2D{u= x47nPz_my9cyiMa R?X_VVd.0I$+:r-6E{A*BAe]H/QXBn-gd(FL,w*4҈䘃Z:H`ڕ#<=3Ѹh] aT$̗.}W)|g*K >*';QAn} HͨHQzW) |eΟrf82h bJ3|z AFPE=(s\ C BLEdP@h&XZ?QWM@jV8QH.^A8VP!͚ɤY!MU+*EL OLd~0|YcE qA{s+̮]̒㴷o}D:E@-tmCcw41$YCU5F_3`=)b.L˛E & Eց:cJlEyDsFzE87eRU-QCpbDM`f:;e@{̍x@GiE,JT307TD9(CzP|OfլbPVbV䮵EvylP>Ehޒ'Ď]=LбoDhZ'+d!K`u})txM}*$bcujc޾@ hx-+W\AHP#vۦw W(I]A;*1tCAdžj,_b=#dbFLaJ'Um7u'[[-t(џ4,r*1;2M41HO2i1tpT Cʝƫ#I;U` 3hjh;El>2A-YvEE-PNhEM-"gdw6~ 떻.Bivg Sezԕr*hQ,}xXjciۿ\D+sK6nq>]tUE 'GW z3gؐףNo{]˒G_%°{=:PV!p(}+:[ҊV`m%"mɹe16>*#rNNw' @Bۮ1tیVī~>r 㑾tUW(tlUTȶ렿]6|_ya| RlÙx;%g@Ʒ ȡ?K5cneC)[?lRI<<L332Y0b?x'l'O?y|7_}xz_o߽?ׇ|˷__zu^xOo>y_Q߾~wo_ۏo߼yo>מ{{ah=[^//?^?~<|~a?W?~o?ا%IQxX _ɉ]PHI"W4s +߆a)6?P /y z eDgG",x~ >Fn0 d<Д Kb+[#L!OG}h5x,`ʸjv8CO~1rtҠ '䑕ÉHmGԔ0P#=3@rc}j,xye->.2=oR; ځCM$ W_:x<@97`ࢣf 7oJG;ٛ il*C4 H|MKvH m;[1]^AD l+o4!oYS*HMEp; *:^ 3Z0Vx j<_[E$+ 3EvZ$c %x "JPf H7:~q( NN=1?*:t䕐8Pn84 ϐv!wYɴCm~•y1H'{ -мp0aB%'+HUbiBʧ>IBOaFȃ :Fڣ{MðR@/V?ɻ 9ʻQ9hEżPƐ:0_8 RR;`e)A/̔V!Ѝ;KMX`<>:Fs%| T0hC+:=bɬ"v!!Ser#: OAeÐTo畈AbsE{8T=u纑TY߷13V<V&5&#[{@*2M(w<0fB`pPC,b)y9!gkP rYsݍzJ yL%cKOd)ݎ*GJ6, a1(X쬞lUД RRl̨[QP:V") :=#Wv),CC|U=:<2JsgHB:A^l^QVjι>:V"*-^Nc>3? aWWݰc4~,y/Ցe2mg|~}7o_t7O=ֻX <cSt}S7^t^|t'*CaI@Kή@Ƙ#d̊kAuS_Άu3i+/Q%0X0 ڦ߄ ɡpbo!Y_|7Iկ4!Q8L)}~fjVh$G &7&X$hfub#ƯEydc/Vi䁡Q/p66]yKODq%gd+'FuEUƭǾ"^SoP˟HzB/Kei>{Nm6* yb!eYNcW(d:<%fvӾ'[D0rJU ~N\eL&&,ckL0 `?R0ua:S( Òcƶ9("J\?81Z'IkW][0؎:qlONI2S湌PE9y.)8W\dLP!ymG@x8 Z!pڤ{WS*A̞&Ľ9 $TS(ZA6d} p&x;"Md`I"+Z1/Y-rVRmZn#dLVl=6ޣ}iլTU\IɎN{ݑQ̾؜Ɛv<:6Mes?@k)\/<{=ӫk#0r_zygko>ܷ?zTM_?BFH9_{z_|/VcxE< z:HVOL|,/:w.2yXAr]uPkAssWiY~4\yrYe|ypC/1 )rG6pwI<#v#8)\ H'0◻ëQN1a92N0@¢7uh{]!(; Nsr.1~)9/U WAa9qd j#7'K3@oy [ `(L[A0FrLnφ%D¸Bnr4n޷hHo]S(ܮ'v`FXFM#چځO>Nx %@~) iq6ȅR0q`\ߜw8 p2jfZ27,`(s\&<ZXŅsȻ34 Q8`p]i Iۛ1^S¤9_xXnTr lFS#f@_$"e'*2LJKV{6JΘ;,h)S~@ t%zcv2ꛌu CoxԀL颭^  &{(SN/fϚđn\`| Y6@L*2KY#u)ܠcq%6`sMRVkX6$HGW,8CvY:KaRK3 ^ +9Mr{tofsp؉%3Eb[U[D/ό]Yފލ [b }UK,}]M-zۯ6u=,'7(`MFWb& Nyj22'aW\/1TІѕJэҔ?R#uCzv*U]zTSz s|yN]F5|G`H.jGY31J'Uu2Ql3qb t^los*݌^cgUwi 5 ၃\LG֋_)KViFz?ɳA \i2Y8}d,UݳK65.`:nb&9𧂸uoqQvS_KY?)"aј #eΛ5.e ] fd[F)XV]28 C>#o&P%)G/\>P <fN]}{⶘,J\/5M9h=s,X":9}c '?N}6"7V'QE*WC1D8 ryGe )]s3|X@jW">s~ί?3%opr޿>G￶?^. xo,\w/\$va&ؼD6_l04.prm=zfˎko 8uQX-Naƞeq.slk%&qw;=yoJ\mVq_Lw33mpg۝C?6<|݄2!LQpY4ڝa*zg)оy2D],XTEJO)}3 NꚯE?EtPKTf8Uí^ M)8;UJ,|mcaTuI/Tj;:OA^Y x@=+{U-NපʥKH|S=MX5[RmdK3S벢\/S ](~.V[Y 2 3e׶0SRÍ6xAG]hty aZmStvu~:͍~|`ڤk.nS6]8[O׬I$y;+A1'`M-qSp$GRTu(ϼrɿBN Mg:Tal)z♻Ri4ĜDƂu7Uls0t!Ɏb %%j9HB_ΓQkޏ*O8(7$O׮ ҉7gT15qN4)c s%ɝfB)MeTJ%Ve"uh:tʹQthȉQ-?;|Tkg*`32׍;ٝtsޅ Tg6u>pU~֏cn,u}RʮqR!{ q^`SU̠Vi^F28udQiPBϩgJw/Yjr̜c[@g/i9tn:veoRBmIf~BqSZF4SzœT!i9aϦ~R, Hހ-*$nhF Lw9/ުVRLdOrgwƬYT)by@M!HY*>p+?Wy=ծZuB:W^vb`PA`y\WHKxX%!d-[ ;ыrF0wX6$A*esa"|L9Y9J69P\2ٿeauf(TSAQ%@QT5̮ $`ut xުFͤd.YSs/CcY{FYvF(:lgnO:Y4~8RxP @+nsh91|wZ̟_}C#zN :˟nepvwBLĢE!MTҔ̟VՎʜcQvt={cdvB;(ajm-0qJT\0Q(I9'mh6TxITvG؊:D7+4h=*iNR3 5*Vs1qQMyp"G:cFqh%i) 5m[97B iHe}ZgT]\FT7$R8Ml$Nk/H#Rв>iG:UjEN@D{%Dӡ"{%'2_\tbC Ĩ: 0 PTҪSRa_ 0ZV(!{a1+h!s{9Wp X}! F`3J?! )pA-ta8Z7$y\ʎ&3kdV:[9duJ>\˟(Y? Tf7ֵ8Լpca¶mw7Da[ܨiElj?N<3aa}NU #c \9I;RO^wUǓv;uV12`S//U52!7Hqi?p@RRx|!Õ>mhm텗֘O)bzs?{p/Y0?L x~_l8 !D`OhY> !\,س,x.?h`(`if^*錌snM@S~``y`Om7Ww7Wo~]x#1sqŏo~뻟/.߽}?ןϾ{/Y|{qWw7Kx}8_<|᫗~x82/a9eay9EB& S|&|),F#fr{S9/;>*uҁ)r;FLJ0#6/gcI."GxcXNjhj_0&hseμE3ǖ3,fOyYo.dL%ba#Ro=du9aYf3e¶^t6gM`r\$[tHF]'ٗ((_@ԙ(EGUr&TRwD]/<ayY\䫯$:үj!i[ Wc/a>#}*}RW\+)Ģm<@ )Y)'`BU(gm쳞4IXq~O .X;ͿSZY`)#"90 -]h,t ˑT.)G3FlyA,8oB1fz]cm[`7~궼0KWj%-U~L!#p>UR C ՗;esʉOecB r6 ЉyޔaX\i'XJ2f΀d9%ǎw@|6-;ufgw-c!r!`݃>;䵤1uj9_pDvv`wu15"Գf'йX}Haux1|A`ynYSq|,R0/W5%58`b|P㛪ԼR ?etΊ]ȟeʦKeDr[-hTAG 52"b͉&';c0-n>$W ?uC1XҲQ*XcaQ4 ɱ3n+`#ItcTEi >vB| UkJ-災+B'_`x&0U=wT(0yUCn;~IbEcG1؉_`Ūm݉F}"XRB`,LlQ M*se-̞qϬ}__T Eq98CB_eJi;mӢRfaeW/e 8_UtUjv]f]Р׹q3HR3wh!˂q[/+IJAE?2I䥥Q$ClnJEWfgĸd hA9th,8BnO:!Z8B㲶A")CډUQ`~|? }~qo/z |?'m8g?\E - }gR8x C?;a7mm?w7_?>]deXV>PC B{gNq5<M &=uo~2j ӖuC4ƕ3;lE$[ , !RRcno\qGt#=/NոX%!|Kl TWv̇+O`VN@8M6>q}|B=謹ΌLJ pbePJAyTݏ;{+jezjM&1Pg(ދVu: _ Uv8D_b!FI :2[=nH 漉y۞Ǣa'qjH5 ˎ%0׃ Z v9ey!'|,z{H?`9+`Ҳv;4PPL~/ |xOU o?a<#?'M;8qyC+?)|,0YAJ`cu/T2b/$XQw\SM m3Ha_q97;] 38{6vsl>0ö!5;r7PUq6x8O(/+1pҝFr6*Ū^5WQ,WGi: :oD~[CNz ߷[`]ϖgS(H"%mV)RkvxEb?4A _4sM:ɦ{fPuѳ{.BmI?!l6,ȋH5nx;wK:>~H?,lZS&8%'w()dl8l0Y-Kͨ2%,c tm)i[쇚v^T m3i9a%E2 BؠƜ %Ti}[J}td^v"#@̥}w4]HsxL5&X6UFQ.BfUE Y,f02"aHw8v%,laWԀ5`y*RR :pX:} '3|)Ht#ڴ #Ϟ~l#D6gVQg=L_Ͼ?޾?iQO-O"xųE~kqAbT3dQs>& Pqu_T>aO/]m"XoK"ZZkR/F};Y &lyQ9"Q}͒\퐰o.rL䴾g]uĆZ3833La=]d3!|"hcc״A$ԿbgvBSuqMUmyע~}J7uIRq >6kG}cXjw rfc;hO{O{zsQ=Wz)Pm%SAihYGٹWK>L67Ca}+O6$5HIgCZ^6/ |8 bNPOt_=yaTָ]k nnw(z ;6>jN}t-5*z6t}[2C4K ׫kydvv)UKo?ExΏz"{3NÎU>5c1y'ѭ>;U}o~Q1JZ?{J[c^֞|ln ZIn [(Q?d=_t̃yId-?۴+H=yA۸ό ji"jsc[_1CU<DUbjğ&XLz1.6m̂ kҝ4tbڵ^c]䞽}]mg$UՂS)++ǜ4WDO+L CICNo4nw|l#c.Ө1*XaxC{}}`z@?d>!'8x}qioG:d﫥ӊ(wWVm6^fCA㱬xX~FiEI0z?M0mL7h {L{9A5JK˂sZ%rS;{I#헨6N^2'? ݋ĩVὺ y(!>%k?F ^YYzLJE:N ah^5M=ɮmAun0%ATB??< FP0e[cT5* I9e(WgY$.t bAzD2kc|PG]' \[e&S` ^~a4J6dS8ɬHzK%0KW4>SE0O} "@1v!Yh{,lHX|5vMu29_߇ZFtР-i1c0`Y{wpH0qW1:YLr?̌{QKc2q=VE'^}Y?]\]{ssi}wu^ӻO[p:Oۅ}5S#>l"wGĬ %8/)U@J4t ۪6Z6i-dʘoo2/ #<%cAVnlQu 'H#5#ڞa$%\+d2KUG3eA]\D+" #aʓM42ZD@=H(YgAߪjnjÛDv{,i-S^*<.+2$@ QkX,z:gbdg"=-IQ>q$B_LhK͚JY_f{3X.#6d@Zd$zcbꀬwp싽Tcin7L|g?6=u>l9=;B_:5Ͽ|?WЩ9$Vr¶1{.>]D?Uޜ TX]]< XKAVXk;a}=ȀtyH?LʚV|JSu胫}#gljt曔%,I% |%Ԉg'@|c\5q q8̭$^[Bha.@T`aPXm}=?wEYa&[SEױ'Q&0 x*-RjF!Op+wg[{ bi̼ar&;-W%й7TbSԴQ- k1@!T)h fEtٶ8mU5EzHc) (:=1T#7uYX 7_/}et6Aņ)(_٢<$qAC|k)Y)-*uQd1 c+{W6+8+I `ӞXv8%bCdei4ڧa E'%}M`Z4RT-f*ev6ߤL 6[v /eӈRDj)6 ,k{I:ÌO_l+-un&m`Ak` _W* mh& @2XUB5*7Ң`'Xr] GtT 1uɀN\J^ .:17Dԏ3`Hf0pTtK+pq鼩ESFW(J#) 0_}A=`M\k^qpqݼ5i黙vݪQ^DrʆM#rmݫ1bAD o'Pnf\E5,ʥPR\N#̤4r!S1@X_3!aź\(MTZtV cN%9N%Nҵki\;~ f/X0 ǒ)*_hdpj[WPkAu0dZ1c, 3ǒ כ%+>?W6,$X[O(5m&*D%JmĢN31 o7mDr:C 59A?'ox|\vC|O.[X˴]utمs1)X)q%/o/>2͎fݦbӪjMQ98 Ml%Þ4*wM3v+m;H[ShSFf: P`~7 rs۞eNA(4|+\ +[l8m͂ݍ*\+(:?+/2㣈j|8[+Cq5E>bnh8Q.ÈӼ Nl}XѬwB[Q`Dv `|K/[nĦ%r_o:LfEW vNA2F N,C| wW)*c-g rb9bNhϻW ?Ceώ#ɾOBCR$]nG}V3@g!l xkY3H-)Aa>~XTy.UE*XsS1c7^۽J&2McܛT޶ǽu{e/?ס`]!LWG,׫B^]x@.f tҗzc# ~o, ?>]?%rug^fuj׫XȤYݟh"Hq^@_ 䉂 1 MXǑD :HKgGK;5}DDщFr&6Dh{-3yDDI8^URy,911xƿ>6~2їxߐΌc2ӧ5fϟz~uRy}lL 1gxΗrڗOޤL*Ik]{<B%jǶi AfCI̷}jCSCP|y,Li8X-nӣ" -;АA>wfJDPWuBUǢ"sI1^/,YjCiS^[P^$R5 n04eh k[FȧQc9b))8ߦ:7.2i/$ jjH"Yv8, ǟy]7eo`G 1pry 1S(i\dCUU;?Y!i@(b.op$&)e(ȆO*更X2 73fX-Ep׸߱^FpO'-?)f-Ryau/lzb;͙H@X,~mpAR3%)L N!T)6HBt[2eM7 ALY< 7ـ7w<04d=\B y + Ƒ8aJ@ /D~>YcG0G*[s,2L^TA`a3/hđVޤȼ!) N)&T<$l! !m]Ąe'yhIj7jrWhQ*+AbtXE %mr>XX 75=ff8/+R"(rU |%YJ\F94]L K{e~*44eEEkT$ZGGJej+5@s46`h^Y[,,X:ѲH&$*kpEa67(iI; h2]pAV"h"լT󴋑s:%ˇ]z}6o|نۧkF闻CggmN7?^=g?\'HA{xH&x<@YOHXldn7"rE(t" 0{MnԾ )fx2pR ,hUKJB^5jagr)hWMFf8H&_W$\|&{Fʨ-;e-uNH볧 d榫`]TP!(lLkmZJک)OKI7]fC yq)bnjm>u*v}4SuQcD:PcI}ĺ|LN*{Oq[/mVeV)T"!wLGb2lD56{bILF9Q12IȏBYk\ b^Ϟ<]7 q͆,L&+DZ}\v!dHת!He(&{J#L3)4fҋ{k +)2S2,e׹|=j5w;u]sC*wj $eI4k_RkIILSn@)Yn(dD({;Qs BJ;Kif#IFkI*E%TFx\VM[ܚ@LݩNu ;..Cѱeʌs^bjBuD KA* s0'wY _oce2*4Ga S![ Z7e;=[A͉C *8*>9}}cZ {p=a75 $998Y gURd]$PoF-)SjU&;25oCeBI X7r;>Q1qh،[/ƄuWeP,8 V8]; '6\ l V6(Kusu&?`w~gBOXMPAH{Eg]sd2NY:ƞaT:U F:CN-#`V9 mKgnc3)nċmWq8лrGΑq 3)PK7⻲Tp_=Ƶ/I_Zg_(9_=Z|3?o~/o__O?{EotnnO>-3W{Bc4eQ)-j,ܟi] PȒ0K&)P:{CVܮNKsZz'@g70tۼ90S圌k0zᙎ0e*c{4 8'X(;X6u (H^'F CY$$~cfHi[Wʠ8C=k,Ufʹ _C qHas 4͖ZhJ=cw$`vci 8~;m%7 Ε>6O>ŘA-ͦs'V[Pc2(^Ooj( I" "baY#?Cᤞ/DP#qDl/OܳԠlX9OĪ* !ZY`TWoDhejչa`FMRA,9cGDDsh4CIƋfPq^訕 r `?c̵l Jϕs:D {J,[ŚQ @G4ObEO.C0,X vluenjl ?ř5FE M"ɣ6$CpɏT.Im^GM4lh&g?# زjAVLmk,kdLL^Ѵ_st=kd9#i׸a5uޔH(l$ZdLQZ< ـD_[/=0ag&erWQ,/='=8s._} "+مN3p{p)w:Y\S*? JDsJLJ1eUjRѾunsңT ߩS ۈT=$Alw^jf `_ ֻ:TkIUXa:!GasB)TD\T+B jv:oѵz!Q-Lj>U"پu|c?.8_B`=_p┘(-30KϾʬqTwhߣf)ؐSjD!3;mT-Lrrp-hc" !k'g&џ f W!>9@'Vki$$z.X}|ŕ`D(N"tVhU۝Fmj}m9\y{\\yrSN݀5/L G-WV{4_p$B^vp~72y۹CTLk^ {bQKlmܰxn'z,1 gZTdZ#voIk^şW0TrjmQGVq`AHkoϩs%Es=XMYC.s4m+SVsNMd$Vjio#> Uj'=k 6p/T" yaV=:鳶i,2rWC˵eREʰ@0k &|e|IjqhaYpʪv j]stV6icM*1DVU*k;HEX;ʩQtGGr$D*[qǴ z ;+QeyIx8mkI\`B1d, IV? m+ڴ12RRPKUd'Jۊ[dizV́jT^;cქ=a 6s`ؐd;LjZێ"y:$(i*gLװPs]"AZX}`z[n}HiӰw-3FxnVK9J'wyzV̭vN3eR4dVb6%67GP6v*m)s;2o7|w/.g2vI\<_>;}ss!Jcקrˆ#o/ontY+uyVsy*xIIHs*eTeJk6,NINw"rrRۡBzzt)U.nZ>)nl )i \eSꚡ8~po}Iz:.$ZZ%aa,CG}r*.l˵˜k{Z3幟M)*qs?z1ܙp]2d_ʌ{Xǖ夘6ΐhLAPmG,AI˩^n3o9),ţ'ϏvaB֘o !s@2 -ԈFmdgd9d{u00JTz;t{XXe8 mnUeᘒ&Ly]/Pz8/ש /\PT׶Õulěm x%o," 9+ș3,meeV8l#M|B(8^FJyɦ!ij]+Ng : 9YQ>OyCb([%Y%izi'A.1#G_e)j_i]{1T-uqέƯ sNM0x4<͙18MyW׀-0׭\MƧN57  ==8d'k(8X@‡,*붃ts#WW]&#|&5*!RzJM4_zoeApԠu% 331c[G 1TA0Eǯh ×6:sN=u*c +ȍyVW!.Њ&~YC+\Չ80ںMqi]\^7I{}b\9+Ⱦ^4#^7nk[nc:oS/Y!O4kv[u*Ecs;ˊGGh&wD*^Q9 _׍5bتtr~2LdRVVu?0dyYup; Sí̻5!aLp9gO(qN+t?5ǤK'A5)^ egdz[W̓ SxE`HOΪ`.c24Ųly;yx9HBR1Yq+*ƌ+* 5Nd;GW5BBCaugur-24.2.2/tests/data/titer_model/000077500000000000000000000000001456376326500173275ustar00rootroot00000000000000augur-24.2.2/tests/data/titer_model/h3n2_titers_subset.tsv000066400000000000000000000015071456376326500236210ustar00rootroot00000000000000A/Acores/11/2013 A/Alabama/5/2010 F27/10 NIMR_Sep2013_7-11.csv 80 hi A/Acores/11/2013 A/Athens/112/2012 F16/12 NIMR_Sep2013_7-11.csv 640 hi A/Acores/11/2013 A/Berlin/93/2011 T/CF11/12 NIMR_Sep2013_7-11.csv 640 hi A/Acores/11/2013 A/Victoria/208/2009 F7/10 NIMR_Sep2013_7-11.csv <80 hi A/Acores/11/2013 A/Stockholm/18/2011 F28/11 NIMR_Sep2013_7-11.csv 160 hi A/Acores/SU43/2012 A/Alabama/5/2010 F27/10 NIMR_Feb2013_18.csv 320 hi A/Acores/SU43/2012 A/Hawaii/22/2012 F37/12 NIMR_Feb2013_18.csv 320 hi A/Acores/11/2013 A/Perth/16/2009 F35/11 NIMR_Sep2013_7-11.csv 40 hi A/Acores/SU43/2012 A/Texas/50/2012 F36/12 NIMR_Feb2013_18.csv >1280 hi A/Adana/116/2014 A/Iowa/19/2010 F15/11 NIMR_Feb2014_9-09.csv 80 hi A/Cairo/63/2012 A/Texas/50/2012 F36/12 NIMR_Feb2013_16.csv 1280 hi A/Cairo/63/2012 A/Texas/50/2012 F36/12 NIMR_Sep2013_7-04.csv 640 hi augur-24.2.2/tests/data/zika.json000066400000000000000000004534771456376326500166750ustar00rootroot00000000000000{ "meta": { "build_url": "https://github.com/nextstrain/zika-tutorial", "colorings": [ { "key": "gt", "title": "Genotype", "type": "categorical" }, { "key": "num_date", "title": "Date", "type": "continuous" }, { "key": "author", "title": "Author", "type": "categorical" }, { "key": "country", "scale": [ [ "Thailand", "#511EA8" ], [ "Singapore", "#4334BF" ], [ "French Polynesia", "#4041C7" ], [ "American Samoa", "#3F50CC" ], [ "Brazil", "#56A0AF" ], [ "Ecuador", "#63AC99" ], [ "Colombia", "#6BB18E" ], [ "Venezuela", "#86BB6E" ], [ "Panama", "#A4BE56" ], [ "Nicaragua", "#AFBD4F" ], [ "Honduras", "#B9BC4A" ], [ "Guatemala", "#CCB742" ], [ "Puerto Rico", "#E68234" ], [ "Dominican Republic", "#E4632E" ], [ "USA", "#DC2F24" ] ], "title": "Country", "type": "categorical" }, { "key": "region", "scale": [ [ "Southeast Asia", "#4274CE" ], [ "Oceania", "#88BB6C" ], [ "South America", "#E56C2F" ], [ "North America", "#DC2F24" ] ], "title": "Region", "type": "categorical" } ], "display_defaults": { "map_triplicate": true }, "filters": [ "country", "region", "author" ], "genome_annotations": { "2K": { "end": 6897, "seqid": "config/zika_outgroup.gb", "start": 6829, "strand": "+", "type": "CDS" }, "CA": { "end": 456, "seqid": "config/zika_outgroup.gb", "start": 91, "strand": "+", "type": "CDS" }, "ENV": { "end": 2472, "seqid": "config/zika_outgroup.gb", "start": 961, "strand": "+", "type": "CDS" }, "MP": { "end": 960, "seqid": "config/zika_outgroup.gb", "start": 736, "strand": "+", "type": "CDS" }, "NS1": { "end": 3528, "seqid": "config/zika_outgroup.gb", "start": 2473, "strand": "+", "type": "CDS" }, "NS2A": { "end": 4206, "seqid": "config/zika_outgroup.gb", "start": 3529, "strand": "+", "type": "CDS" }, "NS2B": { "end": 4596, "seqid": "config/zika_outgroup.gb", "start": 4207, "strand": "+", "type": "CDS" }, "NS3": { "end": 6447, "seqid": "config/zika_outgroup.gb", "start": 4597, "strand": "+", "type": "CDS" }, "NS4A": { "end": 6828, "seqid": "config/zika_outgroup.gb", "start": 6448, "strand": "+", "type": "CDS" }, "NS4B": { "end": 7650, "seqid": "config/zika_outgroup.gb", "start": 6898, "strand": "+", "type": "CDS" }, "NS5": { "end": 10359, "seqid": "config/zika_outgroup.gb", "start": 7651, "strand": "+", "type": "CDS" }, "PRO": { "end": 735, "seqid": "config/zika_outgroup.gb", "start": 457, "strand": "+", "type": "CDS" }, "nuc": { "end": 10769, "seqid": "config/zika_outgroup.gb", "start": 1, "strand": "+", "type": "source" } }, "geo_resolutions": [ { "demes": { "American Samoa": { "latitude": -14.27806, "longitude": -170.7025 }, "Brazil": { "latitude": -10.3333332, "longitude": -53.1999999 }, "Colombia": { "latitude": 2.893108, "longitude": -73.7845142 }, "Dominican Republic": { "latitude": 18.50012, "longitude": -69.98857 }, "Ecuador": { "latitude": -1.3397667, "longitude": -79.3666964 }, "French Polynesia": { "latitude": -17.6797, "longitude": -149.4068 }, "Guatemala": { "latitude": 15.6356088, "longitude": -89.8988086 }, "Honduras": { "latitude": 15.0610686, "longitude": -84.5978533 }, "Nicaragua": { "latitude": 13.0, "longitude": -85.0 }, "Panama": { "latitude": 8.3096067, "longitude": -81.3066245 }, "Puerto Rico": { "latitude": 18.2459121, "longitude": -66.4164147 }, "Singapore": { "latitude": 1.2904527, "longitude": 103.852038 }, "Thailand": { "latitude": 14.8971921, "longitude": 100.83273 }, "USA": { "latitude": 39.7837304, "longitude": -100.4458824 }, "Venezuela": { "latitude": 8.0, "longitude": -66.0 } }, "key": "country" }, { "demes": { "North America": { "latitude": 28.2367447, "longitude": -97.738017 }, "Oceania": { "latitude": -25.0562891, "longitude": 152.008576 }, "South America": { "latitude": -13.083583, "longitude": -58.470721 }, "Southeast Asia": { "latitude": 3.020567, "longitude": 112.390683 } }, "key": "region" } ], "maintainers": [ { "name": "Trevor Bedford", "url": "http://bedford.io/team/trevor-bedford/" } ], "panels": [ "tree", "map" ], "title": "Tutorial Nextstrain build for Zika virus", "updated": "2020-01-21" }, "tree": { "branch_attrs": { "mutations": {} }, "children": [ { "branch_attrs": { "labels": { "aa": "NS3: H584Y; PRO: N17S" }, "mutations": { "NS3": [ "H584Y" ], "PRO": [ "N17S" ], "nuc": [ "A255G", "A506G", "T541C", "G636A", "A786G", "A798G", "T1224C", "C1287A", "T1389C", "T1974C", "C2175T", "T2388C", "G2508A", "G2715A", "T2782C", "A3015T", "T3120C", "T3237C", "C3882T", "T3972C", "T4068C", "C4311T", "G4437A", "G4506A", "T4716C", "T4983C", "T5043C", "C5271T", "A5358G", "C5370T", "A5619G", "T5658C", "C6039T", "C6346T", "A6489G", "G6564A", "A6667C", "T7033C", "C7635T", "T8295A", "T9000C", "T9423G", "G9438A", "T9483C", "G9735A", "C9792T", "A9936G", "G10191A", "G10272A", "T10460C" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "NS1: K206R; NS2A: I80V; NS4B: A112T; NS5: N402K, N556H" }, "mutations": { "NS1": [ "K206R" ], "NS2A": [ "I80V" ], "NS4B": [ "A112T" ], "NS5": [ "N402K", "N556H" ], "nuc": [ "T210C", "C405T", "C759T", "T876C", "T1041C", "G1869C", "G2529A", "A3089G", "A3162G", "G3270A", "A3750G", "C3757T", "A3766G", "C5496T", "A5832G", "A6144G", "C6264T", "T6993C", "T7170C", "G7231A", "T7320A", "C7461T", "C7672T", "T8052C", "T8190C", "C8856A", "A9316C", "G9327A" ] } }, "name": "Thailand/1610acTw", "node_attrs": { "accession": "MF692778", "author": { "author": "Lin et al", "journal": "Unpublished", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Imported Zika virus strains, Taiwan, 2016", "value": "Lin et al" }, "country": { "confidence": { "Thailand": 0.9999999999999999 }, "entropy": -9.99866855976916e-13, "value": "Thailand" }, "div": 0.006062745778482157, "num_date": { "confidence": [ 2016.7632394437605, 2016.8350444900752 ], "value": 2016.8350444900752 }, "region": { "confidence": { "Southeast Asia": 0.9999999999999999 }, "entropy": -9.99866855976916e-13, "value": "Southeast Asia" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/MF692778" } }, { "branch_attrs": { "labels": { "aa": "NS1: V194A; PRO: T74A" }, "mutations": { "NS1": [ "V194A" ], "PRO": [ "T74A" ], "nuc": [ "A676G", "C1221T", "T1848C", "T3053C", "A3360G", "T3928C", "G4152A", "A5727G", "T6087C" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "PRO: G79V" }, "mutations": { "PRO": [ "G79V" ], "nuc": [ "G692T", "C4716T", "G4767A", "G6489A", "A7821G", "A10335G" ] } }, "name": "SG_018", "node_attrs": { "accession": "KY241688", "author": { "author": "Ho et al", "journal": "Lancet Infect Dis (2017) In press", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Outbreak of Zika virus infection in Singapore: an epidemiological, entomological, virological, and clinical analysis", "value": "Ho et al" }, "country": { "confidence": { "Singapore": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Singapore" }, "div": 0.004848114488178502, "num_date": { "confidence": [ 2016.7036276522929, 2016.7036276522929 ], "value": 2016.7036276522929 }, "region": { "confidence": { "Southeast Asia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Southeast Asia" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY241688" } }, { "branch_attrs": { "mutations": { "nuc": [ "C4503T", "T6393C" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "PRO: A74T" }, "mutations": { "PRO": [ "A74T" ], "nuc": [ "G676A", "C8016T", "T8433C" ] } }, "name": "SG_056", "node_attrs": { "accession": "KY241726", "author": { "author": "Ho et al", "journal": "Lancet Infect Dis (2017) In press", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Outbreak of Zika virus infection in Singapore: an epidemiological, entomological, virological, and clinical analysis", "value": "Ho et al" }, "country": { "confidence": { "Singapore": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Singapore" }, "div": 0.004754911970176468, "num_date": { "confidence": [ 2016.6598220396988, 2016.6598220396988 ], "value": 2016.6598220396988 }, "region": { "confidence": { "Southeast Asia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Southeast Asia" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY241726" } }, { "branch_attrs": { "mutations": { "nuc": [ "T891C", "T7500A", "T7843C" ] } }, "name": "SG_027", "node_attrs": { "accession": "KY241697", "author": { "author": "Ho et al", "journal": "Lancet Infect Dis (2017) In press", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Outbreak of Zika virus infection in Singapore: an epidemiological, entomological, virological, and clinical analysis", "value": "Ho et al" }, "country": { "confidence": { "Singapore": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Singapore" }, "div": 0.004754946479460192, "num_date": { "confidence": [ 2016.6570841889118, 2016.6570841889118 ], "value": 2016.6570841889118 }, "region": { "confidence": { "Southeast Asia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Southeast Asia" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY241697" } }, { "branch_attrs": { "mutations": {} }, "name": "SG_074", "node_attrs": { "accession": "KY241744", "author": { "author": "Ho et al", "journal": "Lancet Infect Dis (2017) In press", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Outbreak of Zika virus infection in Singapore: an epidemiological, entomological, virological, and clinical analysis", "value": "Ho et al" }, "country": { "confidence": { "Singapore": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Singapore" }, "div": 0.004475742593493351, "num_date": { "confidence": [ 2016.6598220396988, 2016.6598220396988 ], "value": 2016.6598220396988 }, "region": { "confidence": { "Southeast Asia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Southeast Asia" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY241744" } } ], "name": "NODE_0000016", "node_attrs": { "country": { "confidence": { "Singapore": 0.9999932253017484 }, "entropy": 9.865735249916702e-05, "value": "Singapore" }, "div": 0.004475742593493351, "num_date": { "confidence": [ 2016.2323577118088, 2016.5804886634542 ], "value": 2016.4951975467675 }, "region": { "confidence": { "Southeast Asia": 0.9999990287502224 }, "entropy": 1.5156989710741505e-05, "value": "Southeast Asia" } } } ], "name": "NODE_0000015", "node_attrs": { "country": { "confidence": { "French Polynesia": 0.0013225477641056462, "Singapore": 0.9903426132497476, "Thailand": 0.0060327163474586665 }, "entropy": 0.06884860953541636, "value": "Singapore" }, "div": 0.004289642209177104, "num_date": { "confidence": [ 2015.735255867066, 2016.3793853319605 ], "value": 2016.2295383141993 }, "region": { "confidence": { "Southeast Asia": 0.9996664079056886 }, "entropy": 0.003159805758690683, "value": "Southeast Asia" } } } ], "name": "NODE_0000014", "node_attrs": { "country": { "confidence": { "American Samoa": 0.018376325602819488, "French Polynesia": 0.05643588012182809, "Singapore": 0.5700566347615479, "Thailand": 0.2856391818018074 }, "entropy": 1.2657757704417625, "value": "Singapore" }, "div": 0.0034517963150515955, "num_date": { "confidence": [ 2014.734171263111, 2015.8379709962574 ], "value": 2015.2873904498272 }, "region": { "confidence": { "Oceania": 0.011566463645665737, "Southeast Asia": 0.9871665071168743 }, "entropy": 0.07365657838133624, "value": "Southeast Asia" } } }, { "branch_attrs": { "mutations": {} }, "children": [ { "branch_attrs": { "labels": { "aa": "CA: S109N; ENV: K419R; NS1: R324Q; NS5: N624S, K670R" }, "mutations": { "CA": [ "S109N" ], "ENV": [ "K419R" ], "NS1": [ "R324Q" ], "NS5": [ "N624S", "K670R" ], "nuc": [ "T249C", "G416A", "C789T", "T2032C", "T2076C", "A2216G", "T3321C", "G3443A", "C4428T", "T4602A", "A4671G", "T4740C", "T5286C", "T5676C", "T6405C", "C6475T", "T7026C", "G7230A", "C8145T", "T8652C", "C8748T", "A9521G", "T9595C", "A9659G", "A9768G", "C10596T" ] } }, "children": [ { "branch_attrs": { "mutations": {} }, "name": "ZKC2/2016", "node_attrs": { "accession": "KX253996", "author": { "author": "Wu et al", "journal": "Submitted (18-MAY-2016) Center for Diseases Control and Prevention of Guangdong Province; National Institute of Viral Disease Control and Prevention, China", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Direct Submission", "value": "Wu et al" }, "country": { "confidence": { "American Samoa": 1.0 }, "entropy": -1.000088900581841e-12, "value": "American Samoa" }, "div": 0.003634074655722747, "num_date": { "confidence": [ 2016.1286789869953, 2016.1286789869953 ], "value": 2016.1286789869953 }, "region": { "confidence": { "Oceania": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Oceania" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KX253996" } }, { "branch_attrs": { "mutations": {} }, "name": "SMGC_1", "node_attrs": { "accession": "KX266255", "author": { "author": "Bi et al", "journal": "Chin. Sci. Bull. 61 (22), 2463-2474 (2016)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Genetic and Biological Characterization for Zika Viruses Imported through Shenzhen Port", "value": "Bi et al" }, "country": { "confidence": { "American Samoa": 1.0 }, "entropy": -1.000088900581841e-12, "value": "American Samoa" }, "div": 0.003634074655722747, "num_date": { "confidence": [ 2016.123203285421, 2016.123203285421 ], "value": 2016.123203285421 }, "region": { "confidence": { "Oceania": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Oceania" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KX266255" } } ], "name": "NODE_0000013", "node_attrs": { "country": { "confidence": { "American Samoa": 0.992460628497695, "French Polynesia": 0.004612063325374456 }, "entropy": 0.05677871395364968, "value": "American Samoa" }, "div": 0.003634074655722747, "num_date": { "confidence": [ 2016.0179883157218, 2016.123203285421 ], "value": 2016.123203285421 }, "region": { "confidence": { "Oceania": 0.999699833680312 }, "entropy": 0.0029856512155387194, "value": "Oceania" } } }, { "branch_attrs": { "mutations": { "nuc": [ "G9711A" ] } }, "children": [ { "branch_attrs": { "mutations": { "nuc": [ "C3433T", "A3639G", "G8478A" ] } }, "name": "1_0087_PF", "node_attrs": { "accession": "KX447509", "author": { "author": "Pettersson et al", "journal": "MBio 7 (5), e01239-16 (2016)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/27729507", "title": "How Did Zika Virus Emerge in the Pacific Islands and Latin America?", "value": "Pettersson et al" }, "country": { "confidence": { "French Polynesia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "French Polynesia" }, "div": 0.0015829073375906743, "num_date": { "confidence": [ 2013.9270203623398, 2013.9993155373031 ], "value": 2013.9993155373031 }, "region": { "confidence": { "Oceania": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Oceania" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KX447509" } }, { "branch_attrs": { "mutations": { "nuc": [ "G1158A" ] } }, "children": [ { "branch_attrs": { "mutations": { "nuc": [ "G765A", "G1827A", "T1974C" ] } }, "name": "1_0181_PF", "node_attrs": { "accession": "KX447512", "author": { "author": "Pettersson et al", "journal": "MBio 7 (5), e01239-16 (2016)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/27729507", "title": "How Did Zika Virus Emerge in the Pacific Islands and Latin America?", "value": "Pettersson et al" }, "country": { "confidence": { "French Polynesia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "French Polynesia" }, "div": 0.0016759332255144677, "num_date": { "confidence": [ 2013.930472049502, 2013.9993155373031 ], "value": 2013.9993155373031 }, "region": { "confidence": { "Oceania": 0.9999999999999999 }, "entropy": -9.99866855976916e-13, "value": "Oceania" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KX447512" } }, { "branch_attrs": { "mutations": { "nuc": [ "A4227G", "C8748T" ] } }, "name": "1_0199_PF", "node_attrs": { "accession": "KX447519", "author": { "author": "Pettersson et al", "journal": "MBio 7 (5), e01239-16 (2016)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/27729507", "title": "How Did Zika Virus Emerge in the Pacific Islands and Latin America?", "value": "Pettersson et al" }, "country": { "confidence": { "French Polynesia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "French Polynesia" }, "div": 0.0015828804246597191, "num_date": { "confidence": [ 2013.8612195431779, 2013.914442162902 ], "value": 2013.914442162902 }, "region": { "confidence": { "Oceania": 0.9999999999999999 }, "entropy": -9.99866855976916e-13, "value": "Oceania" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KX447519" } }, { "branch_attrs": { "labels": { "aa": "NS5: M114V" }, "mutations": { "NS5": [ "M114V" ], "nuc": [ "T2637C", "T3501C", "T7500C", "A7990G", "C8391T", "G9417A", "G10375A" ] } }, "children": [ { "branch_attrs": { "mutations": { "nuc": [ "A5298G" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "CA: I80T; NS5: A91V" }, "mutations": { "CA": [ "I80T" ], "NS5": [ "A91V" ], "nuc": [ "T329C", "T762C", "G1170T", "G1458A", "A1482G", "C1887T", "C2838T", "T3549C", "T3576C", "C4866T", "T5070C", "T5139C", "T6612A", "T6654C", "T7077C", "T7134C", "C7488T", "C7922T", "T8835C", "T9000C", "C9225T", "C9279T" ] } }, "name": "PRVABC59", "node_attrs": { "accession": "KU501215", "author": { "author": "Lanciotti et al", "journal": "Emerging Infect. Dis. 22 (5), 933-935 (2016)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/27088323", "title": "Phylogeny of Zika Virus in Western Hemisphere, 2015", "value": "Lanciotti et al" }, "country": { "confidence": { "Puerto Rico": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Puerto Rico" }, "div": 0.0041912661823382096, "num_date": { "confidence": [ 2015.9263725823025, 2015.9993155373031 ], "value": 2015.9993155373031 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KU501215" } }, { "branch_attrs": { "mutations": { "nuc": [ "G4767A" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "ENV: S368G, I448V; NS5: P247S, K560R" }, "mutations": { "ENV": [ "S368G", "I448V" ], "NS5": [ "P247S", "K560R" ], "nuc": [ "A2062G", "G2205A", "A2302G", "T2452C", "T3036C", "G3690A", "T3928C", "T6243C", "G6627A", "T7551C", "T8028C", "C8389T", "C9069T", "A9329G", "T9432C" ] } }, "name": "Brazil/2016/ZBRC16", "node_attrs": { "accession": "KY558991", "author": { "author": "Faria et al", "journal": "Nature 546 (7658), 406-410 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538727", "title": "Establishment and cryptic transmission of Zika virus in Brazil and the Americas", "value": "Faria et al" }, "country": { "confidence": { "Brazil": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Brazil" }, "div": 0.0036311576744931296, "num_date": { "confidence": [ 2016.0520191649555, 2016.0520191649555 ], "value": 2016.0520191649555 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY558991" } }, { "branch_attrs": { "labels": { "aa": "NS1: G100A; NS3: M572L; NS5: R525C" }, "mutations": { "NS1": [ "G100A" ], "NS3": [ "M572L" ], "NS5": [ "R525C" ], "nuc": [ "G2771C", "G3600A", "G3846A", "G5178A", "A6310C", "T6708C", "C6720T", "C9223T" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "ENV: V56I; NS5: K174R" }, "mutations": { "ENV": [ "V56I" ], "NS5": [ "K174R" ], "nuc": [ "G1126A", "A1689G", "A2313T", "C6475T", "G6966A", "C7749T", "T8094C", "A8171G", "G9438A" ] } }, "name": "V8375", "node_attrs": { "accession": "KU501217", "author": { "author": "Lanciotti et al", "journal": "Emerging Infect. Dis. 22 (5), 933-935 (2016)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/27088323", "title": "Phylogeny of Zika Virus in Western Hemisphere, 2015", "value": "Lanciotti et al" }, "country": { "confidence": { "Guatemala": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Guatemala" }, "div": 0.0038166819893839504, "num_date": { "confidence": [ 2015.8350444900752, 2015.8350444900752 ], "value": 2015.8350444900752 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KU501217" } }, { "branch_attrs": { "mutations": {} }, "children": [ { "branch_attrs": { "mutations": { "nuc": [ "T4716C", "T4888C", "A6945G", "T9516C" ] } }, "name": "HND/2016/HU_ME59", "node_attrs": { "accession": "KY785418", "author": { "author": "Metsky et al", "journal": "Nature 546 (7658), 411-415 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538734", "title": "Zika virus evolution and spread in the Americas", "value": "Metsky et al" }, "country": { "confidence": { "Honduras": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Honduras" }, "div": 0.0033511723642750133, "num_date": { "confidence": [ 2016.3668720054757, 2016.3668720054757 ], "value": 2016.3668720054757 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY785418" } }, { "branch_attrs": { "labels": { "aa": "NS2B: S5G; NS4B: I176L" }, "mutations": { "NS2B": [ "S5G" ], "NS4B": [ "I176L" ], "nuc": [ "T1449C", "A4219G", "A6444G", "A6846G", "A7423T", "G8064A" ] } }, "name": "Nica1_16", "node_attrs": { "accession": "KX421195", "author": { "author": "Tabata et al", "journal": "Cell Host Microbe 20 (2), 155-166 (2016)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/27443522", "title": "Zika Virus Targets Different Primary Human Placental Cells, Suggesting Two Routes for Vertical Transmission", "value": "Tabata et al" }, "country": { "confidence": { "Nicaragua": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Nicaragua" }, "div": 0.0035373565968549563, "num_date": { "confidence": [ 2016.0520191649555, 2016.0520191649555 ], "value": 2016.0520191649555 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KX421195" } } ], "name": "NODE_0000035", "node_attrs": { "country": { "confidence": { "Brazil": 0.07258773439818494, "Guatemala": 0.1235109172721121, "Honduras": 0.42231346864283265, "Nicaragua": 0.3352632040769463 }, "entropy": 1.4320177514771812, "value": "Honduras" }, "div": 0.0029790233816087207, "num_date": { "confidence": [ 2015.4139336079654, 2015.8130158254037 ], "value": 2015.5986176280699 }, "region": { "confidence": { "North America": 0.9970568164812601, "South America": 0.0028985678416992822 }, "entropy": 0.020354464094882462, "value": "North America" } } } ], "name": "NODE_0000021", "node_attrs": { "country": { "confidence": { "Brazil": 0.2970086442622381, "Guatemala": 0.4337171147187142, "Honduras": 0.12488819775825626, "Nicaragua": 0.0876697221097824 }, "entropy": 1.4912018052816578, "value": "Guatemala" }, "div": 0.0029790233816087207, "num_date": { "confidence": [ 2015.283169359869, 2015.6242686822109 ], "value": 2015.5187345444351 }, "region": { "confidence": { "North America": 0.9586617809504462, "South America": 0.04108511614977397 }, "entropy": 0.17388750137214623, "value": "North America" } } } ], "name": "NODE_0000020", "node_attrs": { "country": { "confidence": { "Brazil": 0.9124803041817018, "Guatemala": 0.0370547562136477, "Honduras": 0.009197018376985222, "Puerto Rico": 0.02066181545527249 }, "entropy": 0.4523168522401672, "value": "Brazil" }, "div": 0.002234338501222154, "num_date": { "confidence": [ 2014.507703450436, 2015.1192558524997 ], "value": 2014.818127947071 }, "region": { "confidence": { "North America": 0.40905887928180185, "South America": 0.5903277945718371 }, "entropy": 0.6817233798420169, "value": "South America" } } } ], "name": "NODE_0000019", "node_attrs": { "country": { "confidence": { "Brazil": 0.914408772587392, "French Polynesia": 0.006296551111378701, "Guatemala": 0.012903163382688479, "Puerto Rico": 0.05049262021340235 }, "entropy": 0.42203557146255816, "value": "Brazil" }, "div": 0.0021413097543174623, "num_date": { "confidence": [ 2014.4659117626684, 2014.9687184697136 ], "value": 2014.6910466498791 }, "region": { "confidence": { "North America": 0.39086594504077976, "South America": 0.6082446060441037 }, "entropy": 0.6763055661103404, "value": "South America" } } }, { "branch_attrs": { "mutations": { "nuc": [ "C2517T", "T3972C" ] } }, "children": [ { "branch_attrs": { "mutations": { "nuc": [ "A1800C", "A1851G", "C2562T", "C6600T", "C7437T", "G8031A", "C8271T", "A9936G" ] } }, "name": "Brazil/2015/ZBRC301", "node_attrs": { "accession": "KY558995", "author": { "author": "Faria et al", "journal": "Nature 546 (7658), 406-410 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538727", "title": "Establishment and cryptic transmission of Zika virus in Brazil and the Americas", "value": "Faria et al" }, "country": { "confidence": { "Brazil": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Brazil" }, "div": 0.002978960245113952, "num_date": { "confidence": [ 2015.3641341546886, 2015.3641341546886 ], "value": 2015.3641341546886 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY558995" } }, { "branch_attrs": { "mutations": { "nuc": [ "C7488T" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "CA: A106T" }, "mutations": { "CA": [ "A106T" ], "nuc": [ "G406A" ] } }, "name": "Brazil/2015/ZBRC303", "node_attrs": { "accession": "KY558997", "author": { "author": "Faria et al", "journal": "Nature 546 (7658), 406-410 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538727", "title": "Establishment and cryptic transmission of Zika virus in Brazil and the Americas", "value": "Faria et al" }, "country": { "confidence": { "Brazil": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Brazil" }, "div": 0.002420405693213413, "num_date": { "confidence": [ 2015.3668720054757, 2015.3668720054757 ], "value": 2015.3668720054757 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY558997" } }, { "branch_attrs": { "mutations": { "nuc": [ "T876C", "C2646T", "A4341G", "C5988T", "T6618C", "A7116G", "T7506C", "G8040A", "A8820G", "C9066T", "T9717C" ] } }, "name": "BRA/2016/FC_6706", "node_attrs": { "accession": "KY785433", "author": { "author": "Metsky et al", "journal": "Nature 546 (7658), 411-415 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538734", "title": "Zika virus evolution and spread in the Americas", "value": "Metsky et al" }, "country": { "confidence": { "Brazil": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Brazil" }, "div": 0.003351408405582982, "num_date": { "confidence": [ 2016.2710472279261, 2016.2710472279261 ], "value": 2016.2710472279261 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY785433" } } ], "name": "NODE_0000005", "node_attrs": { "country": { "confidence": { "Brazil": 0.9998027079363071 }, "entropy": 0.002350951391275563, "value": "Brazil" }, "div": 0.0023273784912966502, "num_date": { "confidence": [ 2014.9194223022832, 2015.3446823985967 ], "value": 2015.2348626967755 }, "region": { "confidence": { "South America": 0.9997791384096577 }, "entropy": 0.0021706373934097956, "value": "South America" } } }, { "branch_attrs": { "labels": { "aa": "CA: D107E; NS1: R324W; NS5: T833A" }, "mutations": { "CA": [ "D107E" ], "NS1": [ "R324W" ], "NS5": [ "T833A" ], "nuc": [ "A3C", "T411A", "T738C", "C858T", "G864T", "C1381T", "C3442T", "A3894G", "C5991T", "C9279T", "A10147G" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "PRO: N17K" }, "mutations": { "PRO": [ "N17K" ], "nuc": [ "C507A", "C1233T", "C2163T", "T7843C", "T10332C" ] } }, "name": "Colombia/2016/ZC204Se", "node_attrs": { "accession": "KY317939", "author": { "author": "Quick et al", "journal": "Nat Protoc 12 (6), 1261-1276 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538739", "title": "Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples", "value": "Quick et al" }, "country": { "confidence": { "Colombia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Colombia" }, "div": 0.0037238272340562747, "num_date": { "confidence": [ 2016.0164271047229, 2016.0164271047229 ], "value": 2016.0164271047229 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY317939" } }, { "branch_attrs": { "mutations": { "nuc": [ "T1029C", "T3705C" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "NS2B: M32I" }, "mutations": { "NS2B": [ "M32I" ], "nuc": [ "G23A", "A35T", "G40A", "T2538C", "A3750G", "G3771A", "G4302A", "C7056T", "T10344C" ] } }, "name": "PAN/CDC_259359_V1_V3/2015", "node_attrs": { "accession": "KX156774", "author": { "author": "Shabman et al", "journal": "Submitted (29-APR-2016) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Direct Submission", "value": "Shabman et al" }, "country": { "confidence": { "Panama": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Panama" }, "div": 0.004282330080250469, "num_date": { "confidence": [ 2015.9637234770705, 2015.9637234770705 ], "value": 2015.9637234770705 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KX156774" } }, { "branch_attrs": { "mutations": { "nuc": [ "G2895A", "T3804C", "C4311T", "T4605G", "C6643T", "T8862G" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "CA: E76D; NS1: T301P; NS5: A833T" }, "mutations": { "CA": [ "E76D" ], "NS1": [ "T301P" ], "NS5": [ "A833T" ], "nuc": [ "G318T", "G438T", "C1233T", "C1416T", "A3373C", "C8016T", "G10147A" ] } }, "name": "VEN/UF_1/2016", "node_attrs": { "accession": "KX702400", "author": { "author": "Blohm et al", "journal": "Genome Announc 5 (17), e00231-17 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28450510", "title": "Complete Genome Sequences of Identical Zika virus Isolates in a Nursing Mother and Her Infant", "value": "Blohm et al" }, "country": { "confidence": { "Venezuela": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Venezuela" }, "div": 0.004654593679820323, "num_date": { "confidence": [ 2016.2327173169062, 2016.2327173169062 ], "value": 2016.2327173169062 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KX702400" } }, { "branch_attrs": { "mutations": { "nuc": [ "T1506C" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "CA: I80T; ENV: D83E" }, "mutations": { "CA": [ "I80T" ], "ENV": [ "D83E" ], "nuc": [ "T329C", "C1209G" ] } }, "name": "COL/FLR_00024/2015", "node_attrs": { "accession": "MF574569", "author": { "author": "Pickett et al", "journal": "Submitted J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Direct Submission", "value": "Pickett et al" }, "country": { "confidence": { "Colombia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Colombia" }, "div": 0.004282181917199624, "num_date": { "confidence": [ 2015.9171800136892, 2015.9993155373031 ], "value": 2015.9758118273248 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/MF574569" } }, { "branch_attrs": { "labels": { "aa": "NS1: L169I, G292E" }, "mutations": { "NS1": [ "L169I", "G292E" ], "nuc": [ "C2977A", "G3347A", "G5655A", "T8445C" ] } }, "name": "COL/FLR_00008/2015", "node_attrs": { "accession": "MF574562", "author": { "author": "Pickett et al", "journal": "Submitted J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/", "title": "Direct Submission", "value": "Pickett et al" }, "country": { "confidence": { "Colombia": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Colombia" }, "div": 0.0044683151459958504, "num_date": { "confidence": [ 2015.9320001197314, 2015.9993155373031 ], "value": 2015.9993155373031 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/MF574562" } } ], "name": "NODE_0000002", "node_attrs": { "country": { "confidence": { "Colombia": 0.9960752999113262, "Venezuela": 0.0023052061046888064 }, "entropy": 0.03120418212341291, "value": "Colombia" }, "div": 0.004096071127207911, "num_date": { "confidence": [ 2015.691344667236, 2015.9264328758395 ], "value": 2015.846726764422 }, "region": { "confidence": { "South America": 0.9997138506957859 }, "entropy": 0.002708431477456873, "value": "South America" } } } ], "name": "NODE_0000001", "node_attrs": { "country": { "confidence": { "Brazil": 0.009432678212238426, "Colombia": 0.8479025385904583, "Panama": 0.033292301819877565, "Venezuela": 0.09848992349374022 }, "entropy": 0.600722560014408, "value": "Colombia" }, "div": 0.0040030376623026815, "num_date": { "confidence": [ 2015.5982076495675, 2015.9008712071586 ], "value": 2015.7821850094722 }, "region": { "confidence": { "North America": 0.0024646266674957255, "South America": 0.9974930367874038 }, "entropy": 0.01775702934966808, "value": "South America" } } } ], "name": "NODE_0000000", "node_attrs": { "country": { "confidence": { "Brazil": 0.030921012666098042, "Colombia": 0.8061349873152789, "Panama": 0.11531333797329076, "Venezuela": 0.03355679144449739 }, "entropy": 0.7379030986186881, "value": "Colombia" }, "div": 0.0034446082682922626, "num_date": { "confidence": [ 2015.1796824557944, 2015.6761601106332 ], "value": 2015.518770422409 }, "region": { "confidence": { "North America": 0.04919941042036439, "South America": 0.9504704760957173 }, "entropy": 0.19931876157134126, "value": "South America" } } } ], "name": "NODE_0000003", "node_attrs": { "country": { "confidence": { "Brazil": 0.09355903484367616, "Colombia": 0.8504887725998999, "Panama": 0.03316391101913413, "Venezuela": 0.010385235489391907 }, "entropy": 0.6038106736552633, "value": "Colombia" }, "div": 0.003258550432411002, "num_date": { "confidence": [ 2015.1110930341, 2015.645894257714 ], "value": 2015.3560676744319 }, "region": { "confidence": { "North America": 0.002403118520249043, "South America": 0.9975553606370509 }, "entropy": 0.017378320700107096, "value": "South America" } } } ], "name": "NODE_0000006", "node_attrs": { "country": { "confidence": { "Brazil": 0.998435098513569, "Colombia": 0.0010211013235945574 }, "entropy": 0.01372725352071052, "value": "Brazil" }, "div": 0.002234350569640211, "num_date": { "confidence": [ 2014.5159564985709, 2015.1044817731597 ], "value": 2014.8044330711755 }, "region": { "confidence": { "South America": 0.9998843644910913 }, "entropy": 0.001180098062838102, "value": "South America" } } }, { "branch_attrs": { "labels": { "aa": "NS1: M349V" }, "mutations": { "NS1": [ "M349V" ], "nuc": [ "A3517G", "G6966A" ] } }, "children": [ { "branch_attrs": { "mutations": { "nuc": [ "T1275C", "T1858C", "T2409C", "A2754G", "A3780G", "G4971T", "C5532T", "G5751A", "G6453C", "A6873G", "C8232A", "T8553C", "C8850T", "A9420G", "G9933T", "C10098T", "A10347G", "T10372C" ] } }, "name": "EcEs062_16", "node_attrs": { "accession": "KX879603", "author": { "author": "Marquez et al", "journal": "Genome Announc 5 (8), e01673-16 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28232448", "title": "First Complete Genome Sequences of Zika Virus Isolated from Febrile Patient Sera in Ecuador", "value": "Marquez et al" }, "country": { "confidence": { "Ecuador": 0.9999999999999999 }, "entropy": -9.99866855976916e-13, "value": "Ecuador" }, "div": 0.003911298969753885, "num_date": { "confidence": [ 2016.2518822724162, 2016.322826046126 ], "value": 2016.2518822724162 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KX879603" } }, { "branch_attrs": { "mutations": { "nuc": [ "T2358C", "C2700T", "T8028C", "C9270T" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "2K: M7I" }, "mutations": { "2K": [ "M7I" ], "nuc": [ "G6849A", "A8169G", "G8520A" ] } }, "name": "Brazil/2015/ZBRA105", "node_attrs": { "accession": "KY558989", "author": { "author": "Faria et al", "journal": "Nature 546 (7658), 406-410 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538727", "title": "Establishment and cryptic transmission of Zika virus in Brazil and the Americas", "value": "Faria et al" }, "country": { "confidence": { "Brazil": 0.9999999999999999 }, "entropy": -9.99866855976916e-13, "value": "Brazil" }, "div": 0.0028856651194405164, "num_date": { "confidence": [ 2015.1478439425052, 2015.1478439425052 ], "value": 2015.1478439425052 }, "region": { "confidence": { "South America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "South America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY558989" } }, { "branch_attrs": { "labels": { "aa": "NS5: I322V, D878E" }, "mutations": { "NS5": [ "I322V", "D878E" ], "nuc": [ "T489C", "T2043C", "T2418C", "C2844T", "C5352T", "T5823C", "C6261T", "T6891C", "G8604A", "A8614G", "G9294A", "T10284G" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "NS3: V126I" }, "mutations": { "NS3": [ "V126I" ], "nuc": [ "T510C", "G630A", "G3474A", "G4972A", "T5250C", "C6934T", "A7038C", "T8025C", "C8316A", "C8370T", "T10372C" ] } }, "name": "DOM/2016/BB_0433", "node_attrs": { "accession": "KY785441", "author": { "author": "Metsky et al", "journal": "Nature 546 (7658), 411-415 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538734", "title": "Zika virus evolution and spread in the Americas", "value": "Metsky et al" }, "country": { "confidence": { "Dominican Republic": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Dominican Republic" }, "div": 0.004748064201492485, "num_date": { "confidence": [ 2016.4517453798767, 2016.4517453798767 ], "value": 2016.4517453798767 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY785441" } }, { "branch_attrs": { "mutations": { "nuc": [ "C5232T" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "NS1: D208G; NS2A: L152M; NS5: Q650R" }, "mutations": { "NS1": [ "D208G" ], "NS2A": [ "L152M" ], "NS5": [ "Q650R" ], "nuc": [ "T2724C", "T2823C", "A3095G", "T3982A", "C6105T", "A9599G", "T10632C" ] } }, "name": "DOM/2016/BB_0183", "node_attrs": { "accession": "KY785420", "author": { "author": "Metsky et al", "journal": "Nature 546 (7658), 411-415 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538734", "title": "Zika virus evolution and spread in the Americas", "value": "Metsky et al" }, "country": { "confidence": { "Dominican Republic": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Dominican Republic" }, "div": 0.004468473521889809, "num_date": { "confidence": [ 2016.2984257357973, 2016.2984257357973 ], "value": 2016.2984257357973 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY785420" } }, { "branch_attrs": { "mutations": { "nuc": [ "C1137T", "C1665T", "A3987G", "T8862C", "A9387G", "A10270C", "A10616G" ] } }, "name": "DOM/2016/MA_WGS16_011", "node_attrs": { "accession": "KY785484", "author": { "author": "Metsky et al", "journal": "Nature 546 (7658), 411-415 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538734", "title": "Zika virus evolution and spread in the Americas", "value": "Metsky et al" }, "country": { "confidence": { "Dominican Republic": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Dominican Republic" }, "div": 0.004468419704818721, "num_date": { "confidence": [ 2016.432580424367, 2016.432580424367 ], "value": 2016.432580424367 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY785484" } }, { "branch_attrs": { "labels": { "aa": "NS5: T808I" }, "mutations": { "NS5": [ "T808I" ], "nuc": [ "C10073T" ] } }, "children": [ { "branch_attrs": { "mutations": { "nuc": [ "T1554C", "T2443C", "T2961C", "G4149A", "T5181C", "A7584G", "C7989T", "A8241G", "C8589T", "T8835C", "C9378T" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "NS1: P112S" }, "mutations": { "NS1": [ "P112S" ], "nuc": [ "C2806T", "C7776T", "C8233T", "T10373C" ] } }, "name": "USA/2016/FLUR022", "node_attrs": { "accession": "KY325473", "author": { "author": "Grubaugh et al", "journal": "Nature (2017) In press", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538723", "title": "Genomic epidemiology reveals multiple introductions of Zika virus into the United States", "value": "Grubaugh et al" }, "country": { "confidence": { "USA": 1.0 }, "entropy": -1.000088900581841e-12, "value": "USA" }, "div": 0.005306221885243012, "num_date": { "confidence": [ 2016.6680355920603, 2016.6680355920603 ], "value": 2016.6680355920603 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY325473" } }, { "branch_attrs": { "labels": { "aa": "ENV: A69V" }, "mutations": { "ENV": [ "A69V" ], "nuc": [ "G459A", "C1166T", "T3982C" ] } }, "name": "Aedes_aegypti/USA/2016/FL05", "node_attrs": { "accession": "KY075937", "author": { "author": "Grubaugh et al", "journal": "Nature (2017) In press", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538723", "title": "Genomic epidemiology reveals multiple introductions of Zika virus into the United States", "value": "Grubaugh et al" }, "country": { "confidence": { "USA": 1.0 }, "entropy": -1.000088900581841e-12, "value": "USA" }, "div": 0.005213149729489614, "num_date": { "confidence": [ 2016.6926762491444, 2016.6926762491444 ], "value": 2016.6926762491444 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY075937" } } ], "name": "NODE_0000029", "node_attrs": { "country": { "confidence": { "Dominican Republic": 0.015893407808824086, "USA": 0.9830617373833994 }, "entropy": 0.09246692367128584, "value": "USA" }, "div": 0.0049340051487095065, "num_date": { "confidence": [ 2016.2229693632282, 2016.5714678088882 ], "value": 2016.490389106341 }, "region": { "confidence": { "North America": 0.9997277362015242 }, "entropy": 0.002606344220211139, "value": "North America" } } }, { "branch_attrs": { "mutations": { "nuc": [ "T531C", "T1524G", "C2238T" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "NS3: Y498C" }, "mutations": { "NS3": [ "Y498C" ], "nuc": [ "C4020T", "C4749T", "A6089G" ] } }, "name": "DOM/2016/BB_0059", "node_attrs": { "accession": "KY785425", "author": { "author": "Metsky et al", "journal": "Nature 546 (7658), 411-415 (2017)", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538734", "title": "Zika virus evolution and spread in the Americas", "value": "Metsky et al" }, "country": { "confidence": { "Dominican Republic": 1.0 }, "entropy": -1.000088900581841e-12, "value": "Dominican Republic" }, "div": 0.0044682308973576605, "num_date": { "confidence": [ 2016.2600958247776, 2016.2600958247776 ], "value": 2016.2600958247776 }, "region": { "confidence": { "North America": 1.0 }, "entropy": -1.000088900581841e-12, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY785425" } }, { "branch_attrs": { "mutations": { "nuc": [ "C918T", "T1047C", "G6882A", "T10320C" ] } }, "children": [ { "branch_attrs": { "labels": { "aa": "NS3: S506P; PRO: R89Q" }, "mutations": { "NS3": [ "S506P" ], "PRO": [ "R89Q" ], "nuc": [ "G722A", "T1224C", "A3639G", "T4734C", "T6112C", "G8082A", "C8544T" ] } }, "name": "USA/2016/FL022", "node_attrs": { "accession": "KY075935", "author": { "author": "Grubaugh et al", "journal": "Nature (2017) In press", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538723", "title": "Genomic epidemiology reveals multiple introductions of Zika virus into the United States", "value": "Grubaugh et al" }, "country": { "confidence": { "USA": 1.0 }, "entropy": -1.000088900581841e-12, "value": "USA" }, "div": 0.005212860212006738, "num_date": { "confidence": [ 2016.558521560575, 2016.558521560575 ], "value": 2016.558521560575 }, "region": { "confidence": { "North America": 0.9999999999999999 }, "entropy": -9.99866855976916e-13, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY075935" } }, { "branch_attrs": { "mutations": { "nuc": [ "G2481A", "T10373C" ] } }, "name": "USA/2016/FLWB042", "node_attrs": { "accession": "KY325478", "author": { "author": "Grubaugh et al", "journal": "Nature (2017) In press", "paper_url": "https://www.ncbi.nlm.nih.gov/pubmed/28538723", "title": "Genomic epidemiology reveals multiple introductions of Zika virus into the United States", "value": "Grubaugh et al" }, "country": { "confidence": { "USA": 1.0 }, "entropy": -1.000088900581841e-12, "value": "USA" }, "div": 0.004747401655644155, "num_date": { "confidence": [ 2016.7392197125257, 2016.7392197125257 ], "value": 2016.7392197125257 }, "region": { "confidence": { "North America": 0.9999999999999999 }, "entropy": -9.99866855976916e-13, "value": "North America" }, "url": "https://www.ncbi.nlm.nih.gov/nuccore/KY325478" } } ], "name": "NODE_0000031", "node_attrs": { "country": { "confidence": { "Dominican Republic": 0.015894550259803204, "USA": 0.983060626175143 }, "entropy": 0.09247136648462362, "value": "USA" }, "div": 0.004561310184936269, "num_date": { "confidence": [ 2016.135802881703, 2016.4147189700354 ], "value": 2016.2291665461812 }, "region": { "confidence": { "North America": 0.9997293232316543 }, "entropy": 0.0025931250938307, "value": "North America" } } } ], "name": "NODE_0000030", "node_attrs": { "country": { "confidence": { "Dominican Republic": 0.524031042886865, "USA": 0.4735108132936197 }, "entropy": 0.7136473243811504, "value": "Dominican Republic" }, "div": 0.004189076005800676, "num_date": { "confidence": [ 2015.8563653071176, 2016.1455196991683 ], "value": 2016.044180283364 }, "region": { "confidence": { "North America": 0.9997097781989117 }, "entropy": 0.002757054784361329, "value": "North America" } } } ], "name": "NODE_0000028", "node_attrs": { "country": { "confidence": { "Dominican Republic": 0.5239930946497486, "USA": 0.4735437198235657 }, "entropy": 0.7136880773701251, "value": "Dominican Republic" }, "div": 0.003909912000169897, "num_date": { "confidence": [ 2015.5756312328008, 2016.004014416941 ], "value": 2015.89637433467 }, "region": { "confidence": { "North America": 0.9996853906522067 }, "entropy": 0.002957295666772064, "value": "North America" } } } ], "name": "NODE_0000026", "node_attrs": { "country": { "confidence": { "Dominican Republic": 0.9988901235732948 }, "entropy": 0.009327545334862455, "value": "Dominican Republic" }, "div": 0.0038168782782896926, "num_date": { "confidence": [ 2015.5096563623997, 2015.9614037627707 ], "value": 2015.8313974110965 }, "region": { "confidence": { "North America": 0.999646627605579 }, "entropy": 0.0031725826949494554, "value": "North America" } } } ], "name": "NODE_0000025", "node_attrs": { "country": { "confidence": { "Brazil": 0.02038233623446182, "Dominican Republic": 0.9760054464770502 }, "entropy": 0.13197703260832766, "value": "Dominican Republic" }, "div": 0.003723843763891156, "num_date": { "confidence": [ 2015.440895772629, 2015.9172562132467 ], "value": 2015.705227062378 }, "region": { "confidence": { "North America": 0.9379350373308736, "South America": 0.0617006747409255 }, "entropy": 0.23509350106976631, "value": "North America" } } } ], "name": "NODE_0000024", "node_attrs": { "country": { "confidence": { "Brazil": 0.9236010038677318, "Dominican Republic": 0.05553020418142342, "Ecuador": 0.010832965586772861, "French Polynesia": 0.00225696004561854 }, "entropy": 0.35263030755276903, "value": "Brazil" }, "div": 0.002606541846981179, "num_date": { "confidence": [ 2014.8522678009053, 2015.095642820057 ], "value": 2015.003133509632 }, "region": { "confidence": { "North America": 0.05808633373289472, "South America": 0.9415322251208496 }, "entropy": 0.22525651204998084, "value": "South America" } } } ], "name": "NODE_0000023", "node_attrs": { "country": { "confidence": { "Brazil": 0.9271575615179198, "Dominican Republic": 0.019574947656682887, "Ecuador": 0.036596717161630085, "French Polynesia": 0.005999263137872718 }, "entropy": 0.37176788759059076, "value": "Brazil" }, "div": 0.0022343509720201223, "num_date": { "confidence": [ 2014.5827884564044, 2014.9494099947376 ], "value": 2014.7409978365113 }, "region": { "confidence": { "North America": 0.0178544850316881, "South America": 0.9817184882411383 }, "entropy": 0.09341774169022339, "value": "South America" } } } ], "name": "NODE_0000007", "node_attrs": { "country": { "confidence": { "Brazil": 0.9770173888261177, "Ecuador": 0.0027857083103623352, "French Polynesia": 0.012771348482517354, "Puerto Rico": 0.0033480555677957557 }, "entropy": 0.1440779772301267, "value": "Brazil" }, "div": 0.002048281036926199, "num_date": { "confidence": [ 2014.4277614230136, 2014.854885096099 ], "value": 2014.560476171914 }, "region": { "confidence": { "North America": 0.025659566373315294, "Oceania": 0.004332544332980809, "South America": 0.9699550053285484 }, "entropy": 0.1476726548355483, "value": "South America" } } } ], "name": "NODE_0000009", "node_attrs": { "country": { "confidence": { "French Polynesia": 0.9988192302553927 }, "entropy": 0.010086350675222535, "value": "French Polynesia" }, "div": 0.0013968125635655043, "num_date": { "confidence": [ 2013.7812783867917, 2013.8992218313642 ], "value": 2013.8298735594567 }, "region": { "confidence": { "Oceania": 0.999274466162976 }, "entropy": 0.006172483053531114, "value": "Oceania" } } } ], "name": "NODE_0000011", "node_attrs": { "country": { "confidence": { "American Samoa": 0.004392160522330537, "French Polynesia": 0.9910888655325212, "Singapore": 0.0014582922832702778 }, "entropy": 0.06707504321025663, "value": "French Polynesia" }, "div": 0.0013037847135130244, "num_date": { "confidence": [ 2013.667121851472, 2013.8653785075612 ], "value": 2013.8132739972966 }, "region": { "confidence": { "Oceania": 0.9994008678711306 }, "entropy": 0.005447032731003333, "value": "Oceania" } } } ], "name": "NODE_0000012", "node_attrs": { "country": { "confidence": { "American Samoa": 0.18350701247808252, "French Polynesia": 0.6551587674694227, "Singapore": 0.05648501518776817, "Thailand": 0.026880748407201036 }, "entropy": 1.232926057895513, "value": "French Polynesia" }, "div": 0.0012107561869862374, "num_date": { "confidence": [ 2013.6381304716897, 2013.8871164331742 ], "value": 2013.7444949350936 }, "region": { "confidence": { "Oceania": 0.9810870253804866, "South America": 0.0012376497404330412, "Southeast Asia": 0.016690453145411243 }, "entropy": 0.10214941181369344, "value": "Oceania" } } } ], "name": "NODE_0000034", "node_attrs": { "country": { "confidence": { "American Samoa": 0.12867669342692836, "French Polynesia": 0.4276055892363558, "Singapore": 0.17786710020330784, "Thailand": 0.08898400844062339 }, "entropy": 1.879206781163566, "value": "French Polynesia" }, "div": 0, "num_date": { "confidence": [ 2011.5618180748477, 2013.3913714064352 ], "value": 2012.6387463799927 }, "region": { "confidence": { "North America": 0.016718115459202657, "Oceania": 0.6762182474947085, "South America": 0.014781264457128046, "Southeast Asia": 0.29228237258896067 }, "entropy": 0.754773028420379, "value": "Oceania" } } }, "version": "v2" }augur-24.2.2/tests/data/zika_outgroup.gb000066400000000000000000000520151456376326500202370ustar00rootroot00000000000000LOCUS PF13/251013_18 10769 bp DNA VRL 05-JUL-2016 DEFINITION Zika virus strain PF13/251013-18, complete genome. ACCESSION KX369547 VERSION KX369547.1 GI:1040461413 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 10769) AUTHORS Troesemeier,J.-H., Musso,D., Bluemel,J. and Baylis,S.A. TITLE Genome sequence of a candidate World Health Organization reference strain for Zika virus for nucleic acid testing JOURNAL Unpublished REFERENCE 2 (bases 1 to 10769) AUTHORS Troesemeier,J.-H., Musso,D., Bluemel,J. and Baylis,S.A. TITLE Direct Submission JOURNAL Submitted (08-JUN-2016) Microbiology, Paul-Ehrlich-Institute, Paul-Ehrlich-Str. 51-59, Langen, Hessen 63225, Germany COMMENT ##Assembly-Data-START## Assembly Method :: MIRA v. 4.0.2; BWA v. 0.7.13 Coverage :: 120 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10769 /collection_date="25-Oct-2013" /country="French Polynesia" /db_xref="taxon:64320" /host="Homo sapiens" /isolation_source="serum" /mol_type="genomic RNA" /organism="Zika virus" /strain="PF13/251013-18" 5'UTR 1..90 CDS 91..10362 /codon_start=1 /db_xref="GI:1040461414" /product="polyprotein" /protein_id="ANN44857.1" /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIR MVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRR GADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDL GHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVTLPSH STRKLQTRSQTWLESREYTKHLIRVENWIFRNPGLALAAAAIAWLLGSSTSQKVIYLVM ILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTV SNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFG KGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVE ITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHA GADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSS GHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQM AVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSG STIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWF SQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGCSVDFSKKETRCGTG VFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSRMENIMWRSVEGELNA ILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGKSYFVRAAKTNNSFVVD GDTLKECPLEHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECDPAVIGTAVKGKEAVH SDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESDLIIPKSLAGPLSHH NTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRSTTASGRVIEEWCC RECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTAGSTDHMDHFSLGVLVILLMV QEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAILMGATFAEMNTGGDVAHLAL IAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISALEGDLMVLINGFALAWLA IRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPF VMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSEVLTAVGLICALAGGFAKADIEMAG PMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKDAEVTGNSPRLDVALDESGDFSLVED DGPPMREIILKVVLMTICGMNPIAIPFAAGAWYVYVKTGKRSGALWDVPAPKEVKKGET TDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRSGEGRLDPYWGDVKQDLV SYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKDGDIGAVALDYPAGTSG SPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFEPSMLKKKQLTVLDLH PGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLPVRYMTTAVNVTHSG TEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGYISTRVEMGEAAAI FMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTVWFVPSVRNGNEI AACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKADRVIDSRRCLK PVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEA RMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQV ASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKS FKEFAAGKRGAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPE TLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVL IVVFLLLVVLIPEPEKQRSPQDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMG RREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVL FGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQ KRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEA GALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGG TGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKL RWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGW NIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQL LLGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDEN HPYRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFK EKVDTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEE EKEWKTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAI WYMWLGARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYAD DTAGWDTRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMD IISRQDQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSN GWDRLKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFC SHHFNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFH RRDLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDK TPVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST QVRYLGEEGSTPGVL" CDS 91..456 /product="capsid protein" /gene="CA" CDS 457..735 /product="propeptide" /gene="PRO" CDS 736..960 /product="membrane protein" /gene="MP" CDS 961..2472 /product="envelope protein" /gene="ENV" CDS 2473..3528 /product="NS1" /gene="NS1" CDS 3529..4206 /product="NS2A" /gene="NS2A" CDS 4207..4596 /product="NS2B" /gene="NS2B" CDS 4597..6447 /product="NS3" /gene="NS3" CDS 6448..6828 /product="NS4A" /gene="NS4A" CDS 6829..6897 /product="2K" /gene="2K" CDS 6898..7650 /product="NS4B" /gene="NS4B" CDS 7651..10359 /product="NS5" /gene="NS5" 3'UTR 10360..10769 ORIGIN 1 gaatcagact gcgacagttc gagtttgaag cgaaagctag caacagtatc aacaggtttt 61 atttggattt ggaaacgaga gtttctggtc atgaaaaacc caaaaaagaa atccggagga 121 ttccggattg tcaatatgct aaaacgcgga gtagcccgtg tgagcccctt tgggggcttg 181 aagaggctgc cagccggact tctgctgggt catgggccca tcaggatggt cttggcgatt 241 ctagcctttt tgagattcac ggcaatcaag ccatcactgg gtctcatcaa tagatggggt 301 tcagtgggga aaaaagaggc tatggaaata ataaagaagt tcaagaaaga tctggctgcc 361 atgctgagaa taatcaatgc taggaaggag aagaagagac gaggcgcaga tactagtgtc 421 ggaattgttg gcctcctgct gaccacagct atggcagcgg aggtcactag acgtgggagt 481 gcatactata tgtacttgga cagaaacgat gctggggagg ccatatcttt tccaaccaca 541 ttggggatga ataagtgtta tatacagatc atggatcttg gacacatgtg tgatgccacc 601 atgagctatg aatgccctat gctggatgag ggggtggaac cagatgacgt cgattgttgg 661 tgcaacacga cgtcaacttg ggttgtgtac ggaacctgcc atcacaaaaa aggtgaagca 721 cggagatcta gaagagctgt gacgctcccc tcccattcca ctagaaagct gcaaacgcgg 781 tcgcaaacct ggttggaatc aagagaatac acaaagcact tgattagagt cgaaaattgg 841 atattcagga accctggcct cgcgttagca gcagctgcca tcgcttggct tttgggaagc 901 tcaacgagcc aaaaagtcat atacttggtc atgatactgc tgattgcccc ggcatacagc 961 atcaggtgca taggagtcag caatagggac tttgtggaag gtatgtcagg tgggacttgg 1021 gttgatgttg tcttggaaca tggaggttgt gtcaccgtaa tggcacagga caaaccgact 1081 gtcgacatag agctggttac aacaacagtc agcaacatgg cggaggtaag atcctactgc 1141 tatgaggcat caatatcaga catggcttcg gacagccgct gcccaacaca aggtgaagcc 1201 taccttgaca agcaatcaga cactcaatat gtctgcaaaa gaacgttagt ggacagaggc 1261 tggggaaatg gatgtggact ttttggcaaa gggagcctgg tgacatgcgc taagtttgca 1321 tgctccaaga aaatgaccgg gaagagcatc cagccagaga atctggagta ccggataatg 1381 ctgtcagttc atggctccca gcacagtggg atgatcgtta atgacacagg acatgaaact 1441 gatgagaata gagcgaaggt tgagataacg cccaattcac caagagccga agccaccctg 1501 gggggttttg gaagcctagg acttgattgt gaaccgagga caggccttga cttttcagat 1561 ttgtattact tgactatgaa taacaagcac tggttggttc acaaggagtg gttccacgac 1621 attccattac cttggcacgc tggggcagac accggaactc cacactggaa caacaaagaa 1681 gcactggtag agttcaagga cgcacatgcc aaaaggcaaa ctgtcgtggt tctagggagt 1741 caagaaggag cagttcacac ggcccttgct ggagctctgg aggctgagat ggatggtgca 1801 aagggaaggc tgtcctctgg ccacttgaaa tgtcgcctga aaatggataa acttagattg 1861 aagggcgtgt catactcctt gtgtaccgca gcgttcacat tcaccaagat cccggctgaa 1921 acactgcacg ggacagtcac agtggaggta cagtacgcag ggacagatgg accttgcaag 1981 gttccagctc agatggcggt ggacatgcaa actctgaccc cagttgggag gttgataacc 2041 gctaaccccg taatcactga aagcactgag aactctaaga tgatgctgga acttgatcca 2101 ccatttgggg actcttacat tgtcatagga gtcggggaga agaagatcac ccaccactgg 2161 cacaggagtg gcagcaccat tggaaaagca tttgaagcca ctgtgagagg tgccaagaga 2221 atggcagtct tgggagacac agcctgggac tttggatcag ttggaggcgc tctcaactca 2281 ttgggcaagg gcatccatca aatttttgga gcagctttca aatcattgtt tggaggaatg 2341 tcctggttct cacaaattct cattggaacg ttgctgatgt ggttgggtct gaacacaaag 2401 aatggatcta tttcccttat gtgcttggcc ttagggggag tgttgatctt cttatccaca 2461 gccgtctctg ctgatgtggg gtgctcggtg gacttctcaa agaaggagac gagatgcggt 2521 acaggggtgt tcgtctataa cgacgttgaa gcctggaggg acaggtacaa gtaccatcct 2581 gactcccccc gtagattggc agcagcagtc aagcaagcct gggaagatgg tatctgtggg 2641 atctcctctg tttcaagaat ggaaaacatc atgtggagat cagtagaagg ggagctcaac 2701 gcaatcctgg aagagaatgg agttcaactg acggtcgttg tgggatctgt aaaaaacccc 2761 atgtggagag gtccacagag attgcccgtg cctgtgaacg agctgcccca cggctggaag 2821 gcttggggga aatcgtactt cgtcagagca gcaaagacaa ataacagctt tgtcgtggat 2881 ggtgacacac tgaaggaatg cccactcgaa catagagcat ggaacagctt tcttgtggag 2941 gatcatgggt tcggggtatt tcacactagt gtctggctca aggttagaga agattattca 3001 ttagagtgtg atccagccgt tattggaaca gctgttaagg gaaaggaggc tgtacacagt 3061 gatctaggct actggattga gagtgagaag aatgacacat ggaggctgaa gagggcccat 3121 ctgatcgaga tgaaaacatg tgaatggcca aagtcccaca cattgtggac agatggaata 3181 gaagagagtg atctgatcat acccaagtct ttagctgggc cactcagcca tcacaatacc 3241 agagagggct acaggaccca aatgaaaggg ccatggcaca gtgaagagct tgaaattcgg 3301 tttgaggaat gcccaggcac taaggtccac gtggaggaaa catgtggaac aagaggacca 3361 tctctgagat caaccactgc aagcggaagg gtgatcgagg aatggtgctg cagggagtgc 3421 acaatgcccc cactgtcgtt ccgggctaaa gatggctgtt ggtatggaat ggagataagg 3481 cccaggaaag aaccagaaag taacttagta aggtcaatgg tgactgcagg atcaactgat 3541 cacatggatc acttctccct tggagtgctt gtgattctgc tcatggtgca ggaagggctg 3601 aagaagagaa tgaccacaaa gatcatcata agcacatcaa tggcagtgct ggtagctatg 3661 atcctgggag gattttcaat gagtgacctg gctaagcttg caattttgat gggtgccacc 3721 ttcgcggaaa tgaacactgg aggagatgta gctcatctgg cgctgatagc ggcattcaaa 3781 gtcagaccag cgttgctggt atctttcatc ttcagagcta attggacacc ccgtgaaagc 3841 atgctgctgg ccttggcctc gtgtcttttg caaactgcga tctccgcctt ggaaggcgac 3901 ctgatggttc tcatcaatgg ttttgctttg gcctggttgg caatacgagc gatggttgtt 3961 ccacgcactg ataacatcac cttggcaatc ctggctgctc tgacaccact ggcccggggc 4021 acactgcttg tggcgtggag agcaggcctt gctacttgcg gggggtttat gctcctctct 4081 ctgaagggaa aaggcagtgt gaagaagaac ttaccatttg tcatggccct gggactaacc 4141 gctgtgaggc tggtcgaccc catcaacgtg gtgggactgc tgttgctcac aaggagtggg 4201 aagcggagct ggccccctag cgaagtactc acagctgttg gcctgatatg cgcattggct 4261 ggagggttcg ccaaggcaga tatagagatg gctgggccca tggccgcggt cggtctgcta 4321 attgtcagtt acgtggtctc aggaaagagt gtggacatgt acattgaaag agcaggtgac 4381 atcacatggg aaaaagatgc ggaagtcact ggaaacagtc cccggctcga tgtggcgcta 4441 gatgagagtg gtgatttctc cctggtggag gatgacggtc cccccatgag agagatcata 4501 ctcaaggtgg tcctgatgac catctgtggc atgaacccaa tagccatacc ctttgcagct 4561 ggagcgtggt acgtatacgt gaagactgga aaaaggagtg gtgctctatg ggatgtgcct 4621 gctcccaagg aagtaaaaaa gggggagacc acagatggag tgtacagagt aatgactcgt 4681 agactgctag gttcaacaca agttggagtg ggagttatgc aagagggggt ctttcacact 4741 atgtggcacg tcacaaaagg atccgcgctg agaagcggtg aagggagact tgatccatac 4801 tggggagatg tcaagcagga tctggtgtca tactgtggtc catggaagct agatgccgcc 4861 tgggacgggc acagcgaggt gcagctcttg gccgtgcccc ccggagagag agcgaggaac 4921 atccagactc tgcccggaat atttaagaca aaggatgggg acattggagc ggttgcgctg 4981 gattacccag caggaacttc aggatctcca atcctagaca agtgtgggag agtgatagga 5041 ctttatggca atggggtcgt gatcaaaaat gggagttatg ttagtgccat cacccaaggg 5101 aggagggagg aagagactcc tgttgagtgc ttcgagcctt cgatgctgaa gaagaagcag 5161 ctaactgtct tagacttgca tcctggagct gggaaaacca ggagagttct tcctgaaata 5221 gtccgtgaag ccataaaaac aagactccgt actgtgatct tagctccaac cagggttgtc 5281 gctgctgaaa tggaggaagc ccttagaggg cttccagtgc gttatatgac aacagcagtc 5341 aatgtcaccc actctggaac agaaatcgtc gacttaatgt gccatgccac cttcacttca 5401 cgtctactac agccaatcag agtccccaac tataatctgt atattatgga tgaggcccac 5461 ttcacagatc cctcaagtat agcagcaaga ggatacattt caacaagggt tgagatgggc 5521 gaggcggctg ccatcttcat gaccgccacg ccaccaggaa cccgtgacgc atttccggac 5581 tccaactcac caattatgga caccgaagtg gaagtcccag agagagcctg gagctcaggc 5641 tttgattggg tgacggatca ttctggaaaa acagtttggt ttgttccaag cgtgaggaac 5701 ggcaatgaga tcgcagcttg tctgacaaag gctggaaaac gggtcataca gctcagcaga 5761 aagacttttg agacagagtt ccagaaaaca aaacatcaag agtgggactt tgtcgtgaca 5821 actgacattt cagagatggg cgccaacttt aaagctgacc gtgtcataga ttccaggaga 5881 tgcctaaagc cggtcatact tgatggcgag agagtcattc tggctggacc catgcctgtc 5941 acacatgcca gcgctgccca gaggaggggg cgcataggca ggaatcccaa caaacctgga 6001 gatgagtatc tgtatggagg tgggtgcgca gagactgacg aagaccatgc acactggctt 6061 gaagcaagaa tgctccttga caatatttac ctccaagatg gcctcatagc ctcgctctat 6121 cgacctgagg ccgacaaagt agcagccatt gagggagagt tcaagcttag gacggagcaa 6181 aggaagacct ttgtggaact catgaaaaga ggagatcttc ctgtttggct ggcctatcag 6241 gttgcatctg ccggaataac ctacacagat agaagatggt gctttgatgg cacgaccaac 6301 aacaccataa tggaagacag tgtgccggca gaggtgtgga ccagacacgg agagaaaaga 6361 gtgctcaaac cgaggtggat ggacgccaga gtttgttcag atcatgcggc cctgaagtca 6421 ttcaaggagt ttgccgctgg gaaaagagga gcggcttttg gagtgatgga agccctggga 6481 acactgccag gacacatgac agagagattc caggaagcca ttgacaacct cgctgtgctc 6541 atgcgggcag agactggaag caggccttac aaagccgcgg cggcccaatt gccggagacc 6601 ctagagacca ttatgctttt ggggttgctg ggaacagtct cgctgggaat ctttttcgtc 6661 ttgatgagga acaagggcat agggaagatg ggctttggaa tggtgactct tggggccagc 6721 gcatggctca tgtggctctc ggaaattgag ccagccagaa ttgcatgtgt cctcattgtt 6781 gtgttcctat tgctggtggt gctcatacct gagccagaaa agcaaagatc tccccaggac 6841 aaccaaatgg caatcatcat catggtagca gtaggtcttc tgggcttgat taccgccaat 6901 gaactcggat ggttggagag aacaaagagt gacctaagcc atctaatggg aaggagagag 6961 gagggggcaa ccataggatt ctcaatggac attgacctgc ggccagcctc agcttgggcc 7021 atctatgctg ccttgacaac tttcattacc ccagccgtcc aacatgcagt gaccacttca 7081 tacaacaact actccttaat ggcgatggcc acgcaagctg gagtgttgtt tggtatgggc 7141 aaagggatgc cattctacgc atgggacttt ggagtcccgc tgctaatgat aggttgctac 7201 tcacaattaa cacccctgac cctaatagtg gccatcattt tgctcgtggc gcactacatg 7261 tacttgatcc cagggctgca ggcagcagct gcgcgtgctg cccagaagag aacggcagct 7321 ggcatcatga agaaccctgt tgtggatgga atagtggtga ctgacattga cacaatgaca 7381 attgaccccc aagtggagaa aaagatggga caggtgctac tcatagcagt agccgtctcc 7441 agcgccatac tgtcgcggac cgcctggggg tggggggagg ctggggccct gatcacagct 7501 gcaacttcca ctttgtggga aggctctccg aacaagtact ggaactcctc tacagccact 7561 tcactgtgta acatttttag gggaagttac ttggctggag cttctctaat ctacacagta 7621 acaagaaacg ctggcttggt caagagacgt gggggtggaa caggagagac cctgggagag 7681 aaatggaagg cccgcttgaa ccagatgtcg gccctggagt tctactccta caaaaagtca 7741 ggcatcaccg aggtgtgcag agaagaggcc cgccgcgccc tcaaggacgg tgtggcaacg 7801 ggaggccatg ctgtgtcccg aggaagtgca aagctgagat ggttggtgga gcggggatac 7861 ctgcagccct atggaaaggt cattgatctt ggatgtggca gagggggctg gagttactac 7921 gccgccacca tccgcaaagt tcaagaagtg aaaggataca caaaaggagg ccctggtcat 7981 gaagaaccca tgttggtgca aagctatggg tggaacatag tccgtcttaa gagtggggtg 8041 gacgtctttc atatggcggc tgagccgtgt gacacgttgc tgtgtgacat aggtgagtca 8101 tcatctagtc ctgaagtgga agaagcacgg acgctcagag tcctctccat ggtgggggat 8161 tggcttgaaa aaagaccagg agccttttgt ataaaagtgt tgtgcccata caccagcact 8221 atgatggaaa ccctggagcg actgcagcgt aggtatgggg gaggactggt cagagtgcca 8281 ctctcccgca actctacaca tgagatgtac tgggtctctg gagcgaaaag caacaccata 8341 aaaagtgtgt ccaccacgag ccagctcctc ttggggcgca tggacgggcc caggaggcca 8401 gtgaaatatg aggaggatgt gaatctcggc tctggcacgc gggctgtggt aagctgcgct 8461 gaagctccca acatgaagat cattggtaac cgcattgaaa ggatccgcag tgagcacgcg 8521 gaaacgtggt tctttgacga gaaccaccca tataggacat gggcttacca tggaagctat 8581 gaggccccca cacaagggtc agcgtcctct ctaataaacg gggttgtcag gctcctgtca 8641 aaaccctggg atgtggtgac tggagtcaca ggaatagcca tgaccgacac cacaccgtat 8701 ggtcagcaaa gagttttcaa ggaaaaagtg gacactaggg tgccagaccc ccaagaaggc 8761 actcgtcagg ttatgagcat ggtctcttcc tggttgtgga aagagctagg caaacacaaa 8821 cggccacgag tctgtaccaa agaagagttc atcaacaagg ttcgtagcaa tgcagcatta 8881 ggggcaatat ttgaagagga aaaagagtgg aagactgcag tggaagctgt gaacgatcca 8941 aggttctggg ctctagtgga caaggaaaga gagcaccacc tgagaggaga gtgccagagt 9001 tgtgtgtaca acatgatggg aaaaagagaa aagaaacaag gggaatttgg aaaggccaag 9061 ggcagccgcg ccatctggta tatgtggcta ggggctagat ttctagagtt cgaagccctt 9121 ggattcttga acgaggatca ctggatgggg agagagaact caggaggtgg tgttgaaggg 9181 ctgggattac aaagactcgg atatgtccta gaagagatga gtcgcatacc aggaggaagg 9241 atgtatgcag atgacactgc tggctgggac acccgcatca gcaggtttga tctggagaat 9301 gaagctctaa tcaccaacca aatggagaaa gggcacaggg ccttggcatt ggccataatc 9361 aagtacacat accaaaacaa agtggtaaag gtccttagac cagctgaaaa agggaagaca 9421 gttatggaca ttatttcgag acaagaccaa agggggagcg gacaagttgt cacttacgct 9481 cttaacacat ttaccaacct agtggtgcaa ctcattcgga atatggaggc tgaggaagtt 9541 ctagagatgc aagacttgtg gctgctgcgg aggtcagaga aagtgaccaa ctggttgcag 9601 agcaacggat gggataggct caaacgaatg gcagtcagtg gagatgattg cgttgtgaag 9661 ccaattgatg ataggtttgc acatgccctc aggttcttga atgatatggg aaaagttagg 9721 aaggacacac aagagtggaa accctcaact ggatgggaca actgggaaga agttccgttt 9781 tgctcccacc acttcaacaa gctccatctc aaggacggga ggtccattgt ggttccctgc 9841 cgccaccaag atgaactgat tggccgggcc cgcgtctctc caggggcggg atggagcatc 9901 cgggagactg cttgcctagc aaaatcatat gcgcaaatgt ggcagctcct ttatttccac 9961 agaagggacc tccgactgat ggccaatgcc atttgttcat ctgtgccagt tgactgggtt 10021 ccaactggga gaactacctg gtcaatccat ggaaagggag aatggatgac cactgaagac 10081 atgcttgtgg tgtggaacag agtgtggatt gaggagaacg accacatgga agacaagacc 10141 ccagttacga aatggacaga cattccctat ttgggaaaaa gggaagactt gtggtgtgga 10201 tctctcatag ggcacagacc gcgcaccacc tgggctgaga acattaaaaa cacagtcaac 10261 atggtgcgca ggatcatagg tgatgaagaa aagtacatgg actacctatc cacccaagtt 10321 cgctacttgg gtgaagaagg gtctacacct ggagtgctgt aagcaccaat cttagtgttg 10381 tcaggcctgc tagtcagcca cagcttgggg aaagctgtgc agcctgtgac ccccccagga 10441 gaagctggga aaccaagcct atagtcaggc cgagaacgcc atggcacgga agaagccatg 10501 ctgcctgtga gcccctcaga ggacactgag tcaaaaaacc ccacgcgctt ggaggcgcag 10561 gatgggaaaa gaaggtggcg accttcccca cccttcaatc tggggcctga actggagatc 10621 agctgtggat ctccagaaga gggactagtg gttagaggag accccccgga aaacgcaaaa 10681 cagcatattg acgctgggaa agaccagaga ctccatgagt ttccaccacg ctggccgcca 10741 ggcacagatc gccgaatagc ggcggccgg // augur-24.2.2/tests/dates/000077500000000000000000000000001456376326500152075ustar00rootroot00000000000000augur-24.2.2/tests/dates/test_ambiguous_date.py000066400000000000000000000107031456376326500216110ustar00rootroot00000000000000import datetime from augur.dates import ambiguous_date from augur.dates.ambiguous_date import AmbiguousDate from augur.dates.errors import InvalidDate from freezegun import freeze_time import pytest class TestAmbiguousDate: @freeze_time("2111-05-05") @pytest.mark.parametrize( "date_str, expected_range", [ ("2000-01-01", (datetime.date(2000, 1, 1), datetime.date(2000, 1, 1))), ("2000-02-XX", (datetime.date(2000, 2, 1), datetime.date(2000, 2, 29))), ("2000-XX-XX", (datetime.date(2000, 1, 1), datetime.date(2000, 12, 31))), ], ) def test_range(self, date_str, expected_range): assert AmbiguousDate(date_str).range() == expected_range @pytest.mark.parametrize( "date_str, fmt", [ ("2005-02-XX", "%Y-%m-%d"), ("2005/02/XX", "%Y/%m/%d"), ("2005-XX-02", "%Y-%d-%m"), ("200502XX", "%Y%m%d"), ], ) def test_range_separators(self, date_str, fmt): assert AmbiguousDate(date_str, fmt=fmt).range() == ( datetime.date(2005, 2, 1), datetime.date(2005, 2, 28), ) @pytest.mark.parametrize( "date_str, expected_components", [ ("2000-01-01", {"Y": "2000", "m": "01", "d": "01"}), ("2000-01-XX", {"Y": "2000", "m": "01", "d": "XX"}), ("2000-XX-XX", {"Y": "2000", "m": "XX", "d": "XX"}), ], ) def test_uncertain_date_components(self, date_str, expected_components): assert ( AmbiguousDate(date_str).uncertain_date_components == expected_components ) def test_uncertain_date_components_error(self): with pytest.raises(InvalidDate, match="Date does not match format"): AmbiguousDate("5-5-5-5-5").uncertain_date_components @pytest.mark.parametrize( "date_str, min_or_max, expected", [ ("2000", "min", 2000), ("2000", "max", 2000), ("200X", "min", 2000), ("200X", "max", 2009), ("20X0", "max", 2090), ("X000", "max", 9000), ("XXXX", "min", 1), ("XXXX", "max", 9999), ], ) def test_resolve_uncertain_int(self, date_str, min_or_max, expected): assert ( ambiguous_date.resolve_uncertain_int(date_str, min_or_max) == expected ) @pytest.mark.parametrize( "date_str, expected_error", [ ("200X-01-01", "so month and day must also be uncertain"), ("2000-XX-01", "so day must also be uncertain"), ], ) def test_assert_only_less_significant_uncertainty(self, date_str, expected_error): with pytest.raises(InvalidDate, match=expected_error): AmbiguousDate(date_str) @freeze_time("2020-05-05") @pytest.mark.parametrize( "date_str, min_max_year, expected_range", [ ("20XX-XX-XX", [2000, 2010], (datetime.date(2000, 1, 1), datetime.date(2010, 12, 31))), # This option does not apply when the year is exact. However, a separate limit of the current date is applied. ("2020-XX-XX", [2000, 2010], (datetime.date(2020, 1, 1), datetime.date(2020, 5, 5))), ("2020-12-XX", [2000, 2010], (datetime.date(2020, 5, 5), datetime.date(2020, 5, 5))), ("2020-12-01", [2000, 2010], (datetime.date(2020, 5, 5), datetime.date(2020, 5, 5))), # The upper bound is in the future, which is valid. However, a separate limit of the current date is applied. ("20XX-XX-XX", [2010, 2030], (datetime.date(2010, 1, 1), datetime.date(2020, 5, 5))), # When there is no upper bound, a date can appear in the future. However, a separate limit of the current date is applied. ("20XX-XX-XX", [2010], (datetime.date(2010, 1, 1), datetime.date(2020, 5, 5))), ], ) def test_min_max_year(self, date_str, min_max_year, expected_range): assert ( AmbiguousDate(date_str).range(min_max_year=min_max_year) == expected_range ) @freeze_time("2020-05-05") @pytest.mark.parametrize( "date_str, min_max_year", [ ("20XX-XX-XX", [1950, 1960]), ("19XX-XX-XX", [2000, 2010]), ], ) def test_min_max_year_date_error(self, date_str, min_max_year): with pytest.raises(InvalidDate, match="Not possible for date to fall within bounds"): AmbiguousDate(date_str).range(min_max_year=min_max_year) augur-24.2.2/tests/dates/test_dates.py000066400000000000000000000114331456376326500177220ustar00rootroot00000000000000import datetime import pytest from freezegun import freeze_time from augur import dates from augur.errors import AugurError class TestDates: @freeze_time("2000-02-20") def test_numeric_date(self): # Test different representations of February 20, 2000. assert dates.numeric_date("2000.138") == pytest.approx(2000.138, abs=1e-3) assert dates.numeric_date("2000-02-20") == pytest.approx(2000.138, abs=1e-3) assert dates.numeric_date(datetime.date(year=2000, month=2, day=20)) == pytest.approx(2000.138, abs=1e-3) # Test relative dates based on freeze_time. assert dates.numeric_date("1D") == pytest.approx(2000.135, abs=1e-3) assert dates.numeric_date("1W") == pytest.approx(2000.119, abs=1e-3) assert dates.numeric_date("1M") == pytest.approx(2000.053, abs=1e-3) assert dates.numeric_date("1Y") == pytest.approx(1999.138, abs=1e-3) assert dates.numeric_date("1Y1M1W") == pytest.approx(1999.034, abs=1e-3) def test_get_numerical_date_from_value_not_ambiguous(self): assert (dates.get_numerical_date_from_value("2000-03-29", "%Y-%m-%d") == pytest.approx(dates.numeric_date(datetime.date(year=2000, month=3, day=29)), abs=1e-3) == pytest.approx(2000.242, abs=1e-3) ) def test_get_numerical_date_from_value_ambiguous_day(self): min_date, max_date = dates.get_numerical_date_from_value("2000-01-XX", "%Y-%m-%d") assert (min_date == pytest.approx(dates.numeric_date(datetime.date(year=2000, month=1, day=1)), abs=1e-3) == pytest.approx(2000.001, abs=1e-3) ) assert (max_date == pytest.approx(dates.numeric_date(datetime.date(year=2000, month=1, day=31)), abs=1e-3) == pytest.approx(2000.083, abs=1e-3) ) def test_get_numerical_date_from_value_ambiguous_month_and_day(self): min_date, max_date = dates.get_numerical_date_from_value("2000-XX-XX", "%Y-%m-%d") assert (min_date == pytest.approx(dates.numeric_date(datetime.date(year=2000, month=1, day=1)), abs=1e-3) == pytest.approx(2000.001, abs=1e-3) ) assert (max_date == pytest.approx(dates.numeric_date(datetime.date(year=2000, month=12, day=31)), abs=1e-3) == pytest.approx(2000.999, abs=1e-3) ) @freeze_time("2000-02-20") def test_get_numerical_date_from_value_current_day_limit(self): min_date, max_date = dates.get_numerical_date_from_value("2000-03-XX", "%Y-%m-%d") assert (min_date == pytest.approx(dates.numeric_date(datetime.date(year=2000, month=2, day=20)), abs=1e-3) == pytest.approx(2000.138, abs=1e-3) ) assert (max_date == pytest.approx(dates.numeric_date(datetime.date(year=2000, month=2, day=20)), abs=1e-3) == pytest.approx(2000.138, abs=1e-3) ) def test_is_date_ambiguous(self): """is_date_ambiguous should return true for ambiguous dates and false for valid dates.""" # Test complete date strings with ambiguous values. assert dates.is_date_ambiguous("2019-0X-0X", "any") assert dates.is_date_ambiguous("2019-XX-09", "month") assert dates.is_date_ambiguous("2019-03-XX", "day") assert dates.is_date_ambiguous("201X-03-09", "year") assert dates.is_date_ambiguous("20XX-01-09", "month") assert dates.is_date_ambiguous("2019-XX-03", "day") assert dates.is_date_ambiguous("20XX-01-03", "day") # Test incomplete date strings with ambiguous values. assert dates.is_date_ambiguous("2019", "any") assert dates.is_date_ambiguous("201X", "year") assert dates.is_date_ambiguous("2019-XX", "month") assert dates.is_date_ambiguous("2019-10", "day") assert dates.is_date_ambiguous("2019-XX", "any") assert dates.is_date_ambiguous("2019-XX", "day") # Test complete date strings without ambiguous dates for the requested field. assert not dates.is_date_ambiguous("2019-09-03", "any") assert not dates.is_date_ambiguous("2019-03-XX", "month") assert not dates.is_date_ambiguous("2019-09-03", "day") assert not dates.is_date_ambiguous("2019-XX-XX", "year") # Test incomplete date strings without ambiguous dates for the requested fields. assert not dates.is_date_ambiguous("2019", "year") assert not dates.is_date_ambiguous("2019-10", "month") def test_get_numerical_dates_dict_error(self): """Using get_numerical_dates with metadata represented as a dict should raise an error.""" metadata = { "example": { "strain": "example", "date": "2000-03-29" } } with pytest.raises(AugurError): dates.get_numerical_dates(metadata) augur-24.2.2/tests/filter/000077500000000000000000000000001456376326500153745ustar00rootroot00000000000000augur-24.2.2/tests/filter/test_relative_dates.py000066400000000000000000000116571456376326500220120ustar00rootroot00000000000000# This file contains functional tests that would normally be written as # Cram-style tests. However, pytest is nice here since it is easy to use with # parameterized inputs/outputs and mocked system time (things that are not # straightforward to set up for Cram tests¹). # ¹ https://github.com/nextstrain/augur/pull/1183#discussion_r1142687476 import argparse from freezegun import freeze_time import pytest import shlex from augur.filter import register_arguments from augur.filter._run import run def parse_args(args): parser = argparse.ArgumentParser() register_arguments(parser) return parser.parse_args(shlex.split(args)) def write_metadata(tmpdir, metadata): fn = str(tmpdir / "metadata.tsv") with open(fn, "w") as fh: fh.write("\n".join(("\t".join(md) for md in metadata))) return fn @freeze_time("2020-03-25") @pytest.mark.parametrize( "argparse_params, metadata_rows, output_sorted_expected", [ ( "--min-date 1D", ( ("SEQ_1","2020-03-23"), ("SEQ_2","2020-03-24"), ("SEQ_3","2020-03-25"), ), ["SEQ_2", "SEQ_3"], ), ( "--max-date 1D", ( ("SEQ_1","2020-03-23"), ("SEQ_2","2020-03-24"), ("SEQ_3","2020-03-25"), ), ["SEQ_1", "SEQ_2"], ), ( "--min-date 4W", ( ("SEQ_1","2020-02-25"), ("SEQ_2","2020-02-26"), ("SEQ_3","2020-03-25"), ), ["SEQ_2", "SEQ_3"], ), ( "--max-date 4W", ( ("SEQ_1","2020-02-25"), ("SEQ_2","2020-02-26"), ("SEQ_3","2020-03-25"), ), ["SEQ_1", "SEQ_2"], ), ( "--min-date 1M", ( ("SEQ_1","2020-01-25"), ("SEQ_2","2020-02-25"), ("SEQ_3","2020-03-25"), ), ["SEQ_2", "SEQ_3"], ), ( "--max-date 1M", ( ("SEQ_1","2020-01-25"), ("SEQ_2","2020-02-25"), ("SEQ_3","2020-03-25"), ), ["SEQ_1", "SEQ_2"], ), ( "--min-date P1M", ( ("SEQ_1","2020-01-25"), ("SEQ_2","2020-02-25"), ("SEQ_3","2020-03-25"), ), ["SEQ_2", "SEQ_3"], ), ( "--max-date P1M", ( ("SEQ_1","2020-01-25"), ("SEQ_2","2020-02-25"), ("SEQ_3","2020-03-25"), ), ["SEQ_1", "SEQ_2"], ), ( "--min-date 2Y", ( ("SEQ_1","2017-03-25"), ("SEQ_2","2018-03-25"), ("SEQ_3","2019-03-25"), ), ["SEQ_2", "SEQ_3"], ), ( "--max-date 2Y", ( ("SEQ_1","2017-03-25"), ("SEQ_2","2018-03-25"), ("SEQ_3","2019-03-25"), ), ["SEQ_1", "SEQ_2"], ), ( "--min-date 1Y2W5D", ( ("SEQ_1","2019-03-05"), ("SEQ_2","2019-03-06"), ("SEQ_3","2019-03-07"), ), ["SEQ_2", "SEQ_3"], ), ( "--max-date 1Y2W5D", ( ("SEQ_1","2019-03-05"), ("SEQ_2","2019-03-06"), ("SEQ_3","2019-03-07"), ), ["SEQ_1", "SEQ_2"], ), ], ) def test_filter_relative_dates(tmpdir, argparse_params, metadata_rows, output_sorted_expected): """Test that various relative dates work""" out_fn = str(tmpdir / "filtered.txt") meta_fn = write_metadata(tmpdir, (("strain","date"), *metadata_rows)) args = parse_args(f'--metadata {meta_fn} --output-strains {out_fn} {argparse_params}') run(args) with open(out_fn) as f: output_sorted = sorted(line.rstrip() for line in f) assert output_sorted == output_sorted_expected @freeze_time("2020-03-25") @pytest.mark.parametrize( "argparse_flag, argparse_value", [ ("--min-date", "3000Y"), ("--max-date", "3000Y"), ("--min-date", "invalid"), ("--max-date", "invalid"), ], ) def test_filter_relative_dates_error(tmpdir, argparse_flag, argparse_value): """Test that invalid dates fail""" out_fn = str(tmpdir / "filtered.txt") meta_fn = write_metadata(tmpdir, (("strain","date"), ("SEQ_1","2020-03-23"))) with pytest.raises(SystemExit) as e_info: parse_args(f'--metadata {meta_fn} --output-strains {out_fn} {argparse_flag} {argparse_value}') assert f"Invalid date '{argparse_value}'" in e_info.value.__context__.message augur-24.2.2/tests/filter/test_subsample.py000066400000000000000000000164241456376326500210070ustar00rootroot00000000000000import pytest import pandas as pd import augur.filter.subsample from augur.errors import AugurError @pytest.fixture def valid_metadata() -> pd.DataFrame: columns = ['strain', 'date', 'country'] data = [ ("SEQ_1","2020-01-XX","A"), ("SEQ_2","2020-02-01","A"), ("SEQ_3","2020-03-01","B"), ("SEQ_4","2020-04-01","B"), ("SEQ_5","2020-05-01","B") ] return pd.DataFrame.from_records(data, columns=columns).set_index('strain') class TestSequencesPerGroup: @pytest.mark.parametrize( "target_max_value, counts_per_group, expected_sequences_per_group", [ (3, [2, 2], 1), (3, [2, 1], 3), (9, [5, 5], 3), (9, [5, 4], 9), (9, [5, 3], 9), ], ) def test_sequences_per_group(self, target_max_value, counts_per_group, expected_sequences_per_group): assert augur.filter.subsample._calculate_sequences_per_group(target_max_value, counts_per_group) == expected_sequences_per_group class TestFilterGroupBy: def test_filter_groupby_strain_subset(self, valid_metadata: pd.DataFrame): metadata = valid_metadata.copy() strains = ['SEQ_1', 'SEQ_3', 'SEQ_5'] group_by_strain = augur.filter.subsample.get_groups_for_subsampling(strains, metadata) assert group_by_strain == { 'SEQ_1': ('_dummy',), 'SEQ_3': ('_dummy',), 'SEQ_5': ('_dummy',) } def test_filter_groupby_dummy(self, valid_metadata: pd.DataFrame): metadata = valid_metadata.copy() strains = metadata.index.tolist() group_by_strain = augur.filter.subsample.get_groups_for_subsampling(strains, metadata) assert group_by_strain == { 'SEQ_1': ('_dummy',), 'SEQ_2': ('_dummy',), 'SEQ_3': ('_dummy',), 'SEQ_4': ('_dummy',), 'SEQ_5': ('_dummy',) } def test_filter_groupby_invalid_error(self, valid_metadata: pd.DataFrame): groups = ['invalid'] metadata = valid_metadata.copy() strains = metadata.index.tolist() with pytest.raises(AugurError) as e_info: augur.filter.subsample.get_groups_for_subsampling(strains, metadata, group_by=groups) assert str(e_info.value) == "The specified group-by categories (['invalid']) were not found." def test_filter_groupby_invalid_warn(self, valid_metadata: pd.DataFrame, capsys): groups = ['country', 'year', 'month', 'invalid'] metadata = valid_metadata.copy() strains = metadata.index.tolist() group_by_strain = augur.filter.subsample.get_groups_for_subsampling(strains, metadata, group_by=groups) assert group_by_strain == { 'SEQ_1': ('A', 2020, (2020, 1), 'unknown'), 'SEQ_2': ('A', 2020, (2020, 2), 'unknown'), 'SEQ_3': ('B', 2020, (2020, 3), 'unknown'), 'SEQ_4': ('B', 2020, (2020, 4), 'unknown'), 'SEQ_5': ('B', 2020, (2020, 5), 'unknown') } captured = capsys.readouterr() assert captured.err == "WARNING: Some of the specified group-by categories couldn't be found: invalid\nFiltering by group may behave differently than expected!\n" def test_filter_groupby_missing_year_error(self, valid_metadata: pd.DataFrame): groups = ['year'] metadata = valid_metadata.copy() metadata = metadata.drop('date', axis='columns') strains = metadata.index.tolist() with pytest.raises(AugurError) as e_info: augur.filter.subsample.get_groups_for_subsampling(strains, metadata, group_by=groups) assert str(e_info.value) == "The specified group-by categories (['year']) were not found. Note that using any of ['month', 'week', 'year'] requires a column called 'date'." def test_filter_groupby_missing_month_error(self, valid_metadata: pd.DataFrame): groups = ['month'] metadata = valid_metadata.copy() metadata = metadata.drop('date', axis='columns') strains = metadata.index.tolist() with pytest.raises(AugurError) as e_info: augur.filter.subsample.get_groups_for_subsampling(strains, metadata, group_by=groups) assert str(e_info.value) == "The specified group-by categories (['month']) were not found. Note that using any of ['month', 'week', 'year'] requires a column called 'date'." def test_filter_groupby_missing_year_and_month_error(self, valid_metadata: pd.DataFrame): groups = ['year', 'month'] metadata = valid_metadata.copy() metadata = metadata.drop('date', axis='columns') strains = metadata.index.tolist() with pytest.raises(AugurError) as e_info: augur.filter.subsample.get_groups_for_subsampling(strains, metadata, group_by=groups) assert str(e_info.value) == "The specified group-by categories (['year', 'month']) were not found. Note that using any of ['month', 'week', 'year'] requires a column called 'date'." def test_filter_groupby_missing_date_warn(self, valid_metadata: pd.DataFrame, capsys): groups = ['country', 'year', 'month'] metadata = valid_metadata.copy() metadata = metadata.drop('date', axis='columns') strains = metadata.index.tolist() group_by_strain = augur.filter.subsample.get_groups_for_subsampling(strains, metadata, group_by=groups) assert group_by_strain == { 'SEQ_1': ('A', 'unknown', 'unknown'), 'SEQ_2': ('A', 'unknown', 'unknown'), 'SEQ_3': ('B', 'unknown', 'unknown'), 'SEQ_4': ('B', 'unknown', 'unknown'), 'SEQ_5': ('B', 'unknown', 'unknown') } captured = capsys.readouterr() assert captured.err == "WARNING: A 'date' column could not be found to group-by ['month', 'year'].\nFiltering by group may behave differently than expected!\n" def test_filter_groupby_no_strains(self, valid_metadata: pd.DataFrame): groups = ['country', 'year', 'month'] metadata = valid_metadata.copy() strains = [] group_by_strain = augur.filter.subsample.get_groups_for_subsampling(strains, metadata, group_by=groups) assert group_by_strain == {} def test_filter_groupby_only_year_provided(self, valid_metadata: pd.DataFrame): groups = ['country', 'year'] metadata = valid_metadata.copy() metadata['date'] = '2020' strains = metadata.index.tolist() group_by_strain = augur.filter.subsample.get_groups_for_subsampling(strains, metadata, group_by=groups) assert group_by_strain == { 'SEQ_1': ('A', 2020), 'SEQ_2': ('A', 2020), 'SEQ_3': ('B', 2020), 'SEQ_4': ('B', 2020), 'SEQ_5': ('B', 2020) } def test_filter_groupby_only_year_month_provided(self, valid_metadata: pd.DataFrame): groups = ['country', 'year', 'month'] metadata = valid_metadata.copy() metadata['date'] = '2020-01' strains = metadata.index.tolist() group_by_strain = augur.filter.subsample.get_groups_for_subsampling(strains, metadata, group_by=groups) assert group_by_strain == { 'SEQ_1': ('A', 2020, (2020, 1)), 'SEQ_2': ('A', 2020, (2020, 1)), 'SEQ_3': ('B', 2020, (2020, 1)), 'SEQ_4': ('B', 2020, (2020, 1)), 'SEQ_5': ('B', 2020, (2020, 1)) } augur-24.2.2/tests/functional/000077500000000000000000000000001456376326500162515ustar00rootroot00000000000000augur-24.2.2/tests/functional/ancestral/000077500000000000000000000000001456376326500202255ustar00rootroot00000000000000augur-24.2.2/tests/functional/ancestral/cram/000077500000000000000000000000001456376326500211475ustar00rootroot00000000000000augur-24.2.2/tests/functional/ancestral/cram/_setup.sh000066400000000000000000000000701456376326500227770ustar00rootroot00000000000000export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" augur-24.2.2/tests/functional/ancestral/cram/ambiguous-positions.t000066400000000000000000000022641456376326500253600ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh $ export DATA="$TESTDIR/../data/simple-genome" $ export SCRIPTS="$TESTDIR/../../../../scripts/" $ cat > reference.fasta < >ref_name > ATGCNNNNATGC > EOF $ cat > snps.vcf < #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT sample_A sample_B sample_C > 1 3 . G N . PASS . GT 1 1 1 > 1 9 . A T . PASS . GT 1 1 0 > EOF $ ${AUGUR} ancestral \ > --tree "$DATA/tree.nwk" \ > --alignment snps.vcf \ > --vcf-reference reference.fasta \ > --output-node-data nt_muts.json \ > --output-vcf nt_muts.vcf > /dev/null $ cat > expected.json < {"nodes": { > "node_root": {"muts": []}, > "node_AB": {"muts": ["A9T"]}, > "sample_A": {"muts": []}, > "sample_B": {"muts": []}, > "sample_C": {"muts": []} > }, > "mask": "001011110000" > } > EOF $ python3 "$SCRIPTS/diff_jsons.py" \ > expected.json "nt_muts.json" \ > --exclude-regex-paths "root\['annotations'\]" "root\['generated_by'\]" "root\['reference'\]" {} $ python3 "$SCRIPTS/compare-json-vcf.py" \ > --tree "$DATA/tree.nwk" \ > --vcf nt_muts.vcf \ > --json nt_muts.json \ > --ref reference.fasta > /dev/null augur-24.2.2/tests/functional/ancestral/cram/case-sensitive.t000066400000000000000000000027761456376326500242720ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Change the _reference_ to lowercase $ sed '2y/ATCGN/atcgn/' < "$TESTDIR/../data/simple-genome/reference.fasta" > ref.lower.fasta $ ${AUGUR} ancestral \ > --tree "$TESTDIR/../data/simple-genome/tree.nwk" \ > --alignment "$TESTDIR/../data/simple-genome/sequences.fasta" \ > --root-sequence ref.lower.fasta \ > --output-node-data "nt_muts.ref-seq.json" \ > --inference marginal > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$TESTDIR/../data/simple-genome/nt_muts.ref-seq.json" \ > "nt_muts.ref-seq.json" \ > --exclude-paths "root['generated_by']" {} Change the _alignment_ to (all) lowercase, so that _if_ inference is being done without first converting to uppercase then the inferred root-sequence will also be lowecase which will be compared against the uppercase reference $ cat "$TESTDIR/../data/simple-genome/sequences.fasta" | \ > sed '2y/ATCGN/atcgn/' | sed '4y/ATCGN/atcgn/' | sed '6y/ATCGN/atcgn/' \ > > sequences.lower.fasta $ ${AUGUR} ancestral \ > --tree "$TESTDIR/../data/simple-genome/tree.nwk" \ > --alignment sequences.lower.fasta \ > --root-sequence "$TESTDIR/../data/simple-genome/reference.fasta" \ > --output-node-data "nt_muts.ref-seq.json" \ > --inference marginal > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$TESTDIR/../data/simple-genome/nt_muts.ref-seq.json" \ > "nt_muts.ref-seq.json" \ > --exclude-paths "root['generated_by']" {}augur-24.2.2/tests/functional/ancestral/cram/default-nucleotide-reconstruction.t000066400000000000000000000015001456376326500301640ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Infer ancestral sequences for the given tree and alignment. The default is to infer ambiguous bases, so there should not be N bases in the inferred output sequences. $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --output-node-data "$CRAMTMP/$TESTFILE/ancestral_mutations.json" \ > --output-sequences "$CRAMTMP/$TESTFILE/ancestral_sequences.fasta" > /dev/null $ grep "^N" "$CRAMTMP/$TESTFILE/ancestral_sequences.fasta" [1] Check that the reference length was correctly exported as the nuc annotation $ grep -A 6 'annotations' "$CRAMTMP/$TESTFILE/ancestral_mutations.json" "annotations": { "nuc": { "end": 10769, "start": 1, "strand": "+", "type": "source" } augur-24.2.2/tests/functional/ancestral/cram/general.t000066400000000000000000000034521456376326500227550ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh General running of augur ancestral. - Note that the (parsimonious) C18T on the branch of Sample_C is inferred by augur as a root mutation of C18T + T18C reversion on Node_AB. This is reflected in the node-data JSON we diff against. - We supply the refererence sequence so mutations are called at the root. - Ambiguous nucleotides (there are 3 Ns in sample_C) are inferred (default) $ ${AUGUR} ancestral \ > --tree "$TESTDIR/../data/simple-genome/tree.nwk" \ > --alignment "$TESTDIR/../data/simple-genome/sequences.fasta" \ > --root-sequence "$TESTDIR/../data/simple-genome/reference.fasta" \ > --output-node-data "nt_muts.ref-seq.json" \ > --inference marginal > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$TESTDIR/../data/simple-genome/nt_muts.ref-seq.json" \ > "nt_muts.ref-seq.json" \ > --exclude-paths "root['generated_by']" {} Same as above but without providing a `--root-sequence`. The effect of this on behaviour is: - The JSON['reference']['nuc'] is not actually the "reference", because we don't know what this is! Instead it's the inferred root-node sequence. See for more. - An array of 'muts' is still present on the root node, but it will never contain any mutations (as there's nothing to compare the root node to) $ ${AUGUR} ancestral \ > --tree "$TESTDIR/../data/simple-genome/tree.nwk" \ > --alignment "$TESTDIR/../data/simple-genome/sequences.fasta" \ > --output-node-data "nt_muts.no-ref-seq.json" \ > --inference marginal > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$TESTDIR/../data/simple-genome/nt_muts.no-ref-seq.json" \ > "nt_muts.no-ref-seq.json" \ > --exclude-paths "root['generated_by']" {} augur-24.2.2/tests/functional/ancestral/cram/infer-ambiguous-nucleotides.t000066400000000000000000000011071456376326500267430ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Infer ancestral sequences for the given tree and alignment, explicitly requesting that ambiguous bases are inferred. There should not be N bases in the inferred output sequences. $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --infer-ambiguous \ > --output-node-data "$CRAMTMP/$TESTFILE/ancestral_mutations.json" \ > --output-sequences "$CRAMTMP/$TESTFILE/ancestral_sequences.fasta" > /dev/null $ grep "^N" "$CRAMTMP/$TESTFILE/ancestral_sequences.fasta" [1] augur-24.2.2/tests/functional/ancestral/cram/infer-amino-acid-sequences-genes-file.t000066400000000000000000000013561456376326500304500ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Infer ancestral nucleotide and amino acid sequences, using a genes file. $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --annotation $TESTDIR/../data/zika_outgroup.gb \ > --genes $TESTDIR/../data/genes.txt \ > --translations $TESTDIR/../data/aa_sequences_%GENE.fasta \ > --output-node-data ancestral_mutations.json \ > --output-sequences ancestral_sequences.fasta \ > --output-translations ancestral_aa_sequences_%GENE.fasta > /dev/null Check that the reference length was correctly exported as the nuc annotation $ grep -E "\"(ENV|PRO|nuc)\": {" ancestral_mutations.json "ENV": { "PRO": { "nuc": { augur-24.2.2/tests/functional/ancestral/cram/infer-amino-acid-sequences-with-root-sequence.t000066400000000000000000000020651456376326500321720ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Infer ancestral nucleotide and amino acid sequences using a root sequence that was used for alignment. This additional argument allows the ancestral command to assign mutations on the branch leading to the inferred root (differences between the "root" used as an alignment reference and the inferred most recent common ancestor). $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --annotation $TESTDIR/../data/zika_outgroup.gb \ > --root-sequence $TESTDIR/../data/zika_outgroup.gb \ > --genes ENV PRO \ > --translations $TESTDIR/../data/aa_sequences_%GENE.fasta \ > --output-node-data "$CRAMTMP/$TESTFILE/ancestral_mutations.json" > /dev/null Check that the reference length was correctly exported as the nuc annotation $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > --exclude-regex-paths "['seqid']" -- \ > "$TESTDIR/../data/ancestral_mutations_with_root_sequence.json" \ > "$CRAMTMP/$TESTFILE/ancestral_mutations.json" {} augur-24.2.2/tests/functional/ancestral/cram/infer-amino-acid-sequences.t000066400000000000000000000022241456376326500264270ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Infer ancestral nucleotide and amino acid sequences. $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --annotation $TESTDIR/../data/zika_outgroup.gb \ > --genes ENV PRO \ > --translations $TESTDIR/../data/aa_sequences_%GENE.fasta \ > --output-node-data "$CRAMTMP/$TESTFILE/ancestral_mutations.json" \ > --output-sequences "$CRAMTMP/$TESTFILE/ancestral_sequences.fasta" \ > --output-translations "$CRAMTMP/$TESTFILE/ancestral_aa_sequences_%GENE.fasta" > /dev/null Check that the reference length was correctly exported as the nuc annotation $ grep -E "\"(ENV|PRO|nuc)\": {" "$CRAMTMP/$TESTFILE/ancestral_mutations.json" "ENV": { "PRO": { "nuc": { Check that amino acid sequences exist for the root node of the tree. $ grep -A 2 "aa_sequences" "$CRAMTMP/$TESTFILE/ancestral_mutations.json" "aa_sequences": { "ENV": .* (re) "PRO": .* (re) Check that internal nodes have ancestral amino acid sequences. $ grep "NODE" "$CRAMTMP/$TESTFILE/ancestral_aa_sequences_ENV.fasta" | wc -l \s*8 (re) augur-24.2.2/tests/functional/ancestral/cram/invalid-args.t000066400000000000000000000046371456376326500237260ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Input FASTA + VCF output is not possible $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --output-vcf "output.vcf" > /dev/null ERROR: VCF output has been requested but the input alignment is not VCF. [2] Input VCF + FASTA output is not possible (Note that the input file doesn't exist, but we exit before that's checked) $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/snps.vcf \ > --output-sequences "output.fasta" > /dev/null ERROR: Sequence (fasta) output has been requested but the input alignment is VCF. [2] Output FASTA _and_ VCF is not possible $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --output-vcf "output.vcf" \ > --output-sequences "output.fasta" > /dev/null ERROR: Both sequence (fasta) and VCF output have been requested, but these are incompatible. [2] Try to infer ancestral amino acid sequences without all required arguments. This should fail. $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --annotation $TESTDIR/../data/zika_outgroup.gb \ > --genes ENV PRO \ > --output-node-data "ancestral_mutations.json" > /dev/null ERROR: For amino acid sequence reconstruction, you must provide an annotation file, a list of genes, and a template path to amino acid sequences. [2] Missing tree file $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree-doesnt-exist.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --output-sequences "output.fasta" > /dev/null ERROR: The provided tree file .* doesn't exist (re) [2] Attempting to use FASTA-input reference and VCF-input reference args (The files here don't exist, but we exit before they're checked) $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree-doesnt-exist.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --root-sequence $TESTDIR/../data/reference.fasta \ > --vcf-reference $TESTDIR/../data/reference.fasta \ > --output-sequences "output.fasta" > /dev/null 2>"err-args.txt" [2] $ grep "augur ancestral: error: argument --vcf-reference: not allowed with argument --root-sequence" "err-args.txt" augur ancestral: error: argument --vcf-reference: not allowed with argument --root-sequence augur-24.2.2/tests/functional/ancestral/cram/keep-ambiguous-nucleotides.t000066400000000000000000000012131456376326500265620ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Infer ancestral sequences for the given tree and alignment, explicitly requesting that ambiguous bases are NOT inferred. There should be N bases in the inferred output sequences. $ ${AUGUR} ancestral \ > --tree $TESTDIR/../data/tree.nwk \ > --alignment $TESTDIR/../data/aligned.fasta \ > --keep-ambiguous \ > --output-node-data "$CRAMTMP/$TESTFILE/ancestral_mutations.json" \ > --output-sequences "$CRAMTMP/$TESTFILE/ancestral_sequences.fasta" > /dev/null $ grep "^N" "$CRAMTMP/$TESTFILE/ancestral_sequences.fasta" | head -n 1 NNNNNNNNNNNNGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT augur-24.2.2/tests/functional/ancestral/cram/vcf-multi-allele.t000066400000000000000000000030471456376326500245020ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh $ export DATA="$TESTDIR/../data/simple-genome" We take the same `snps.vcf` file used in `general.t` but add another allele at site 30 - sample_B has a "G". Since the root is A and this is the only sample with G it's 'A30G'. See for the bug this is testing. $ sed '11s/^/1\t30\t.\tA\tG,N\t.\t.\t.\tGT\t0\t1\t2\n/' \ > "$DATA/snps.vcf" > snps2.vcf $ ${AUGUR} ancestral \ > --tree $DATA/tree.nwk \ > --alignment snps2.vcf \ > --vcf-reference $DATA/reference.fasta \ > --output-node-data nt_muts.json \ > --output-vcf nt_muts.vcf \ > --inference marginal > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$DATA/nt_muts.ref-seq.json" \ > nt_muts.json \ > --exclude-regex-paths "root\['nodes'\]\['.+'\]\['sequence'\]" "root\['generated_by'\]" {'iterable_item_added': {"root['nodes']['sample_B']['muts'][0]": 'A30G'}} $ cat > expected.vcf < #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT node_root sample_C node_AB sample_B sample_A > 1 5 . A C . PASS . GT 1 1 1 1 1 > 1 7 . A G . PASS . GT 0 0 1 1 1 > 1 14 . C T . PASS . GT 0 0 1 1 1 > 1 18 . C T . PASS . GT 1 1 0 0 0 > 1 30 . A G . PASS . GT 0 0 0 1 0 > 1 33 . A C,G . PASS . GT 0 0 2 2 1 > 1 39 . C T . PASS . GT 0 0 0 0 1 > 1 42 . G A . PASS . GT 0 0 0 1 0 > 1 43 . A T . PASS . GT 0 0 1 1 1 > EOF Ignore the meta-lines of the output VCF $ grep -v '##' nt_muts.vcf > nt_muts.no-header.vcf $ diff expected.vcf nt_muts.no-header.vcf augur-24.2.2/tests/functional/ancestral/cram/vcf.t000066400000000000000000000031751456376326500221200ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh $ export DATA="$TESTDIR/../data/simple-genome" This command mirrors the first test in general.t, however with VCF input instead of a FASTA MSA. The output will not have the full sequence attached to every node, but it will have the reference sequence attached. $ ${AUGUR} ancestral \ > --tree $DATA/tree.nwk \ > --alignment $DATA/snps.vcf \ > --vcf-reference $DATA/reference.fasta \ > --output-node-data "nt_muts.vcf-input.ref-seq.json" \ > --output-vcf nt_muts.vcf \ > --inference marginal > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$DATA/nt_muts.ref-seq.json" \ > "nt_muts.vcf-input.ref-seq.json" \ > --exclude-regex-paths "root\['nodes'\]\['.+'\]\['sequence'\]" "root\['generated_by'\]" {} Here's the same mutations as in $DATA/nt_muts.ref-seq.json, but as a VCF file with (a) strain name ordering and (b) ALT ordering to match the way `augur ancestral` writes it. `augur auncestral` also writes FILTER=PASS, which I include here as it's not relevant to what I'm trying to test. $ cat > expected.vcf < #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT node_root sample_C node_AB sample_B sample_A > 1 5 . A C . PASS . GT 1 1 1 1 1 > 1 7 . A G . PASS . GT 0 0 1 1 1 > 1 14 . C T . PASS . GT 0 0 1 1 1 > 1 18 . C T . PASS . GT 1 1 0 0 0 > 1 33 . A C,G . PASS . GT 0 0 2 2 1 > 1 39 . C T . PASS . GT 0 0 0 0 1 > 1 42 . G A . PASS . GT 0 0 0 1 0 > 1 43 . A T . PASS . GT 0 0 1 1 1 > EOF Ignore the meta-lines of the output VCF $ grep -v '##' nt_muts.vcf > nt_muts.no-header.vcf $ diff expected.vcf nt_muts.no-header.vcf augur-24.2.2/tests/functional/ancestral/data/000077500000000000000000000000001456376326500211365ustar00rootroot00000000000000augur-24.2.2/tests/functional/ancestral/data/aa_sequences_2K.fasta000066400000000000000000000006341456376326500251510ustar00rootroot00000000000000>BRA/2016/FC_6706 SPQDNQMAIIIMVAVGLLGLITA >COL/FLR_00008/2015 SPQDNQMAIIIMVAVGLLGLITA >Colombia/2016/ZC204Se SPQDNQMAIIIMVAVGLLGLITA >DOM/2016/BB_0183 SPQDNQMAIIIMVAVGLLGLITA >EcEs062_16 SPQDNQMAIIIMVAVGLLGLITA >HND/2016/HU_ME59 SPQDNQMAIIIMVAVGLLGLITA >PAN/CDC_259359_V1_V3/2015 SPQDNQMAIIIMVAVGLLGLITA >PRVABC59 SPQDNQMAIIIMVAVGLLGLITA >VEN/UF_1/2016 SPQDNQMAIIIMVAVGLLGLITA >ZKC2/2016 SPQDNQMAIIIMVAVGLLGLITA augur-24.2.2/tests/functional/ancestral/data/aa_sequences_CA.fasta000066400000000000000000000026161456376326500251620ustar00rootroot00000000000000>BRA/2016/FC_6706 MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTA MA >COL/FLR_00008/2015 MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGAETSVGIVGLLLTTA MA >Colombia/2016/ZC204Se MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGAETSVGIVGLLLTTA MA >DOM/2016/BB_0183 MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTA MA >EcEs062_16 MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTA MA >HND/2016/HU_ME59 MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTA MA >PAN/CDC_259359_V1_V3/2015 MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGAETSVGIVGLLLTTA MA >PRVABC59 MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKEAMETIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTA MA >VEN/UF_1/2016 MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKDAMEIIKKFKKDLAAMLRIINARKEKKRRGAETSVGIVGLLLTTA MA >ZKC2/2016 MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIK PSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTNVGIVGLLLTTA MA augur-24.2.2/tests/functional/ancestral/data/aa_sequences_ENV.fasta000066400000000000000000000122661456376326500253310ustar00rootroot00000000000000>BRA/2016/FC_6706 IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA >COL/FLR_00008/2015 IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA >Colombia/2016/ZC204Se IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA >DOM/2016/BB_0183 IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA >EcEs062_16 IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA >HND/2016/HU_ME59 IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA >PAN/CDC_259359_V1_V3/2015 IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA >PRVABC59 IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA >VEN/UF_1/2016 IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA >ZKC2/2016 IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYC YEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFA CSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATL GGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKE ALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRL KGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLIT ANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGARR MAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTK NGSISLMCLALGGVLIFLSTAVSA augur-24.2.2/tests/functional/ancestral/data/aa_sequences_MP.fasta000066400000000000000000000016561456376326500252160ustar00rootroot00000000000000>BRA/2016/FC_6706 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS >COL/FLR_00008/2015 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS >Colombia/2016/ZC204Se AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS >DOM/2016/BB_0183 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS >EcEs062_16 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS >HND/2016/HU_ME59 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS >PAN/CDC_259359_V1_V3/2015 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS >PRVABC59 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS >VEN/UF_1/2016 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS >ZKC2/2016 AVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQK VIYLVMILLIAPAYS augur-24.2.2/tests/functional/ancestral/data/aa_sequences_NS1.fasta000066400000000000000000000072501456376326500252770ustar00rootroot00000000000000>BRA/2016/FC_6706 DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRS TTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA >COL/FLR_00008/2015 DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWIKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCETRGPSLRS TTASGRVIEEWCCRECTMPPLSFWAKDGCWYGMEIRPRKEPESNLVRSMVTA >Colombia/2016/ZC204Se DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRS TTASGRVIEEWCCRECTMPPLSFWAKDGCWYGMEIRPRKEPESNLVRSMVTA >DOM/2016/BB_0183 DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNGTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRS TTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSVVTA >EcEs062_16 DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRS TTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSVVTA >HND/2016/HU_ME59 DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRAPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRS TTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA >PAN/CDC_259359_V1_V3/2015 DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRS TTASGRVIEEWCCRECTMPPLSFWAKDGCWYGMEIRPRKEPESNLVRSMVTA >PRVABC59 DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRS TTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTA >VEN/UF_1/2016 DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRS PTASGRVIEEWCCRECTMPPLSFWAKDGCWYGMEIRPRKEPESNLVRSMVTA >ZKC2/2016 DVGCSVDFSKKETRCGTGVFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSV SRMENIMWRSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGK SYFVRAAKTNNSFVVDGDTLKECPLKHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECD PAVIGTAVKGKEAVHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESD LIIPKSLAGPLSHHNTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRS TTASGRVIEEWCCRECTMPPLSFQAKDGCWYGMEIRPRKEPESNLVRSMVTA augur-24.2.2/tests/functional/ancestral/data/aa_sequences_NS2A.fasta000066400000000000000000000046501456376326500254020ustar00rootroot00000000000000>BRA/2016/FC_6706 GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR >COL/FLR_00008/2015 GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR >Colombia/2016/ZC204Se GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR >DOM/2016/BB_0183 GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITMAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR >EcEs062_16 GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR >HND/2016/HU_ME59 GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR >PAN/CDC_259359_V1_V3/2015 GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR >PRVABC59 GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR >VEN/UF_1/2016 GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR >ZKC2/2016 GSTDHMDHFSLGVLVILLMVQEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAIL MGATFAEMNTGGDVAHLALIAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISA LEGDLMVLINGFALAWLAIRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGF MLLSLKGKGSVKKNLPFVMALGLTAVRLVDPINVVGLLLLTRSGKR augur-24.2.2/tests/functional/ancestral/data/aa_sequences_NS2B.fasta000066400000000000000000000027361456376326500254060ustar00rootroot00000000000000>BRA/2016/FC_6706 SWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR >COL/FLR_00008/2015 SWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR >Colombia/2016/ZC204Se SWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR >DOM/2016/BB_0183 SWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR >EcEs062_16 SWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR >HND/2016/HU_ME59 SWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR >PAN/CDC_259359_V1_V3/2015 SWPPSEVLTAVGLICALAGGFAKADIEMAGPIAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR >PRVABC59 SWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR >VEN/UF_1/2016 SWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR >ZKC2/2016 SWPPSEVLTAVGLICALAGGFAKADIEMAGPMAAVGLLIVSYVVSGKSVDMYIERAGDIT WEKDAEVTGNSPRLDVALDESGDFSLVEDDGPPMREIILKVVLMTICGMNPIAIPFAAGA WYVYVKTGKR augur-24.2.2/tests/functional/ancestral/data/aa_sequences_NS3.fasta000066400000000000000000000144641456376326500253060ustar00rootroot00000000000000>BRA/2016/FC_6706 SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR >COL/FLR_00008/2015 SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR >Colombia/2016/ZC204Se SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR >DOM/2016/BB_0183 SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR >EcEs062_16 SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR >HND/2016/HU_ME59 SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTILEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR >PAN/CDC_259359_V1_V3/2015 SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR >PRVABC59 SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR >VEN/UF_1/2016 SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR >ZKC2/2016 SGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRS GEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKD GDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFE PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLP VRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGY ISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTV WFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKA DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAET DEDHAHWLEARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGD LPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVC SDHAALKSFKEFAAGKR augur-24.2.2/tests/functional/ancestral/data/aa_sequences_NS4A.fasta000066400000000000000000000027001456376326500253760ustar00rootroot00000000000000>BRA/2016/FC_6706 GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR >COL/FLR_00008/2015 GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR >Colombia/2016/ZC204Se GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR >DOM/2016/BB_0183 GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR >EcEs062_16 GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR >HND/2016/HU_ME59 GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR >PAN/CDC_259359_V1_V3/2015 GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR >PRVABC59 GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR >VEN/UF_1/2016 GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR >ZKC2/2016 GAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPETLETIMLLGL LGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVLIVVFLLLVVLI PEPEKQR augur-24.2.2/tests/functional/ancestral/data/aa_sequences_NS4B.fasta000066400000000000000000000052541456376326500254060ustar00rootroot00000000000000>BRA/2016/FC_6706 NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR >COL/FLR_00008/2015 NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR >Colombia/2016/ZC204Se NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR >DOM/2016/BB_0183 NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR >EcEs062_16 NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR >HND/2016/HU_ME59 NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR >PAN/CDC_259359_V1_V3/2015 NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR >PRVABC59 NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR >VEN/UF_1/2016 NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR >ZKC2/2016 NELGWLERTKSDLSHLMGRREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTT SYNNYSLMAMATQAGVLFGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHY MYLIPGLQAAAARAAQKRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAV SSAILSRTAWGWGEAGALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYT VTRNAGLVKRR augur-24.2.2/tests/functional/ancestral/data/aa_sequences_NS5.fasta000066400000000000000000000222221456376326500252770ustar00rootroot00000000000000>BRA/2016/FC_6706 GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRM AVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVTKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTP GVL >COL/FLR_00008/2015 GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRM AVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVAKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTP GVL >Colombia/2016/ZC204Se GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRM AVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVAKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTP GVL >DOM/2016/BB_0183 GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLVNGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLRSNGWDRLKRM AVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVTKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGEEEKYMDYLSTQVRYLGEEGSTP GVL >EcEs062_16 GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRM AVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVTKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTP GVL >HND/2016/HU_ME59 GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSCIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRM AVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVTKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTP GVL >PAN/CDC_259359_V1_V3/2015 GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRM AVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVAKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTP GVL >PRVABC59 GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYVATIRKVQEVKGYTKGGPGHEEPVLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRM AVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVTKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTP GVL >VEN/UF_1/2016 GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPVLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRM AVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVTKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTP GVL >ZKC2/2016 GGGTGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSA KLRWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYG WNIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQLL LGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDENHP YRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFKEKV DTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEEEKEW KTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAIWYMWL GARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYADDTAGWD TRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMDIISRQDQ RGSGQVVTYALNTFTNLVVQLIRSMEAEEVLEMQDLWLLRRSEKVTNWLQSNGWDRLKRM AVSGDDCVVRPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFCSHHFNKLHL KDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFHRRDLRLMANA ICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDKTPVTKWTDIPY LGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLSTQVRYLGEEGSTP GVL augur-24.2.2/tests/functional/ancestral/data/aa_sequences_PRO.fasta000066400000000000000000000021421456376326500253310ustar00rootroot00000000000000>BRA/2016/FC_6706 AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR >COL/FLR_00008/2015 AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR >Colombia/2016/ZC204Se AEVTRRGSAYYMYLDRKDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR >DOM/2016/BB_0183 AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR >EcEs062_16 AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR >HND/2016/HU_ME59 AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR >PAN/CDC_259359_V1_V3/2015 AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR >PRVABC59 AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR >VEN/UF_1/2016 AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR >ZKC2/2016 AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGV EPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR augur-24.2.2/tests/functional/ancestral/data/aligned.fasta000066400000000000000000003535411456376326500235740ustar00rootroot00000000000000>KX369547.1 Zika virus strain PF13/251013-18, complete genome GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGAAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCCTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCGAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >BRA/2016/FC_6706 NNNNNNNNNNNNNNNNNNNNNAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCCGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGYAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCTTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTWGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCGGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCYATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCRGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCTAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTCTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAGGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCC GCAACCTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTA GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAG CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGRKTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGTCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTCAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >HND/2016/HU_ME59 NNNNNNNNNNNNNNNNNNNNNNGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATAYGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAWTTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGCTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTA AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTACTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCACTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCCTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTACATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGR TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATACTGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACCCTTGGGGCCAGT GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTGATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTTGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATCCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >PAN/CDC_259359_V1_V3/2015 NNNNNNNNNNNNNNNNNNNNGAATTTGAAGCGAATGCTAACAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTACAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTGGCTCATCTGGCGCTGATAGCAGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATAGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCTGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCCACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >COL/FLR_00008/2015 NNNTCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGCTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGATCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGAAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACAGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCCGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >VEN/UF_1/2016 GACTCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGATGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTTCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATTGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCACCCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAATATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >Colombia/2016/ZC204Se NNNNNNNNNNNNGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAAAGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CATAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGCTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGAYTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGCGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >ZKC2/2016 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTCTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAATGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACTTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGCTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCCAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAGGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACCAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCAGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTTGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGAGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTGATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACC ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCCGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTCTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCACGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCTTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTACGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTAGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTTTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGACGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGATCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAGTATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGCTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAGG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAGGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTTAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >EcEs062_16 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGCGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGACTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCCATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAGAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAG GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCTGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCTATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAACTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCCGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTGGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACACTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATACAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTTATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACG GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCTCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAATAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACGCCTGGAGTGCTGTAAGCACCAATCCTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >DOM/2016/BB_0183 NNNNNNNNNNNNNNNNNNNNNNGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTCCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCCTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGGCACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCATGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTTATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCGG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCCCCAGAAGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >PRVABC59 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAACAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACCAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCTGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAAGTTGAGATAACGCCCAATTCACCGAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACTGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTATTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGACCACTTCTCCCTTGGAGTGCTTGTGATCCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGATGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAACGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCCTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATAATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTCTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACCTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGCATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GTCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGCACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGC TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGTATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN augur-24.2.2/tests/functional/ancestral/data/ancestral_mutations_with_root_sequence.json000066400000000000000000006626331456376326500321160ustar00rootroot00000000000000{ "annotations": { "ENV": { "end": 2472, "seqid": "/Users/jlhudd/projects/nextstrain/augur/tests/functional/ancestral/cram/../data/zika_outgroup.gb", "start": 961, "strand": "+", "type": "CDS" }, "PRO": { "end": 735, "seqid": "/Users/jlhudd/projects/nextstrain/augur/tests/functional/ancestral/cram/../data/zika_outgroup.gb", "start": 457, "strand": "+", "type": "CDS" }, "nuc": { "end": 10769, "start": 1, "strand": "+", "type": "source" } }, "generated_by": { "program": "augur", "version": "22.1.0" }, "mask": "00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000", "nodes": { "BRA/2016/FC_6706": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "T876C", "C2646T", "A4341G", "C5988T", "T6618C", "A7116G", "C7488T", "T7506C", "G8040A", "A8820G", "C9066T", "T9717C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCCGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCTTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCGGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCTAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTCTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAGGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCCGCAACCTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTAGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAGCGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGTCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTCAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "COL/FLR_00008/2015": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "T1506C", "C2977A", "G3347A", "G5655A", "T8445C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGCTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGATCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGAAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACAGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCCGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "Colombia/2016/ZC204Se": { "aa_muts": { "ENV": [], "PRO": [ "N17K" ] }, "muts": [ "C507A", "C1233T", "C2163T", "T7843C", "T10332C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAAAGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCATAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGCTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGCGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "DOM/2016/BB_0183": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "T489C", "T2043C", "T2358C", "T2418C", "C2700T", "T2724C", "T2823C", "C2844T", "A3095G", "T3982A", "C5232T", "C5352T", "T5823C", "C6105T", "C6261T", "T6891C", "T8028C", "G8604A", "A8614G", "C9270T", "G9294A", "A9599G", "T10284G", "T10632C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAATGCAATCCTGGAAGAGAATGGAGTCCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCCTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGGCACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCATGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTTATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCGGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCCCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "EcEs062_16": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "T1275C", "T1858C", "T2409C", "A2754G", "A3780G", "G4971T", "C5532T", "G5751A", "G6453C", "A6873G", "C8232A", "T8553C", "C8850T", "A9420G", "G9933T", "C10098T", "A10347G", "T10372C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGCGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGACTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCCATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAGAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAGGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCTGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCTATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAACTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCCGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTGGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACACTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATACAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTTATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACGGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCTCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAATAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACGCCTGGAGTGCTGTAAGCACCAATCCTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "HND/2016/HU_ME59": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "G2771C", "G3600A", "G3846A", "T4716C", "G4767A", "T4888C", "G5178A", "A6310C", "T6708C", "C6720T", "A6945G", "C9223T", "T9516C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGCTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTAAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTACTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCACTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCCTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTACATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATACTGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACCCTTGGGGCCAGTGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTGATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTTGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATCCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000001": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "T411A", "T738C", "C858T", "G864T", "C1381T", "C3442T", "A3894G", "C5991T", "C9279T", "A10147G" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000002": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "A3517G", "G6966A" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000003": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "T2517C", "C3972T" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000004": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "A5298G" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000005": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000006": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "A765G", "C859T", "C2517T", "T2637C", "G2908A", "T3501C", "T3972C", "T7500C", "A7990G", "C8391T", "G9417A", "G10375A" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000007": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "T1029C", "T3705C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000008": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "G2895A", "T3804C", "C4311T", "T4605G", "C6643T", "T8862G" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "PAN/CDC_259359_V1_V3/2015": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "G23A", "A35T", "G40A", "T2538C", "A3750G", "G3771A", "G4302A", "C7056T", "T10344C" ], "sequence": "GAATCAGACTGCGACAGTTCGAATTTGAAGCGAATGCTAACAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTACAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTGGCTCATCTGGCGCTGATAGCAGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATAGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCTGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCCACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "PRVABC59": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "T329C", "T762C", "G1170T", "G1458A", "A1482G", "C1887T", "C2838T", "T3549C", "T3576C", "C4866T", "T5070C", "T5139C", "T6612A", "T6654C", "T7077C", "T7134C", "C7488T", "C7922T", "T8835C", "T9000C", "C9225T", "C9279T" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAACAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACCAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCTGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAAGTTGAGATAACGCCCAATTCACCGAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACTGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTATTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGACCACTTCTCCCTTGGAGTGCTTGTGATCCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGATGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAACGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCCTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATAATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTCTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACCTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGCATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGTCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGCACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGCTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGTATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "VEN/UF_1/2016": { "aa_muts": { "ENV": [], "PRO": [] }, "muts": [ "A3C", "G318T", "G438T", "C1233T", "C1416T", "A3373C", "C8016T", "G10147A" ], "sequence": "GACTCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGATGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTTCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATTGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCACCCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAATATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "ZKC2/2016": { "aa_muts": { "ENV": [ "K419R" ], "PRO": [] }, "muts": [ "T249C", "G416A", "C789T", "A1158G", "T2032C", "T2076C", "A2216G", "C2637T", "T3321C", "G3443A", "C3501T", "C4428T", "T4602A", "A4671G", "T4740C", "T5286C", "T5676C", "T6405C", "C6475T", "T7026C", "G7230A", "C7500T", "G7990A", "C8145T", "T8391C", "T8652C", "C8748T", "A9417G", "A9521G", "T9595C", "A9659G", "A9711G", "A9768G", "A10375G", "C10596T" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTCTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAATGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACTTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGCTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCCAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAGGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACCAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCAGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTTGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGAGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTGATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACCATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCCGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTCTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCACGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCTTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTACGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTAGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCTGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTTTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGACGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGATCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAGTATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGCTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAGGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAGGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTTAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" } }, "reference": { "ENV": "IRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSA", "PRO": "AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR", "nuc": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGAAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCCTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCGAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCTGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" } }augur-24.2.2/tests/functional/ancestral/data/genes.txt000066400000000000000000000000101456376326500227670ustar00rootroot00000000000000ENV PRO augur-24.2.2/tests/functional/ancestral/data/simple-genome/000077500000000000000000000000001456376326500236775ustar00rootroot00000000000000augur-24.2.2/tests/functional/ancestral/data/simple-genome/nt_muts.no-ref-seq.json000066400000000000000000000020671456376326500302430ustar00rootroot00000000000000{ "annotations": { "nuc": { "end": 50, "start": 1, "strand": "+", "type": "source" } }, "generated_by": { "program": "augur", "version": "23.1.1" }, "mask": "00000000000000000000000000000000000000000000000000", "nodes": { "node_AB": { "muts": [ "A7G", "C14T", "T18C", "A33G", "A43T" ], "sequence": "AAAACAGAAATGCTCTGCGGGTAAAAAAAAAAGAACTACTTGTCCATAAA" }, "node_root": { "muts": [], "sequence": "AAAACAAAAATGCCCTGTGGGTAAAAAAAAAAAAACTACTTGACCATAAA" }, "sample_A": { "muts": [ "G33C", "C39T" ], "sequence": "AAAACAGAAATGCTCTGCGGGTAAAAAAAAAACAACTATTTGTCCATAAA" }, "sample_B": { "muts": [ "G42A" ], "sequence": "AAAACAGAAATGCTCTGCGGGTAAAAAAAAAAGAACTACTTATCCATAAA" }, "sample_C": { "muts": [], "sequence": "AAAACAAAAATGCCCTGTGGGTAAAAAAAAAAAAACTACTTGACCATAAA" } }, "reference": { "nuc": "AAAACAAAAATGCCCTGTGGGTAAAAAAAAAAAAACTACTTGACCATAAA" } }augur-24.2.2/tests/functional/ancestral/data/simple-genome/nt_muts.ref-seq.json000066400000000000000000000020231456376326500276210ustar00rootroot00000000000000{ "annotations": { "nuc": { "end": 50, "start": 1, "strand": "+", "type": "source" } }, "mask": "00000000000000000000000000000000000000000000000000", "nodes": { "node_AB": { "muts": [ "A7G", "C14T", "T18C", "A33G", "A43T" ], "sequence": "AAAACAGAAATGCTCTGCGGGTAAAAAAAAAAGAACTACTTGTCCATAAA" }, "node_root": { "muts": [ "A5C", "C18T" ], "sequence": "AAAACAAAAATGCCCTGTGGGTAAAAAAAAAAAAACTACTTGACCATAAA" }, "sample_A": { "muts": [ "G33C", "C39T" ], "sequence": "AAAACAGAAATGCTCTGCGGGTAAAAAAAAAACAACTATTTGTCCATAAA" }, "sample_B": { "muts": [ "G42A" ], "sequence": "AAAACAGAAATGCTCTGCGGGTAAAAAAAAAAGAACTACTTATCCATAAA" }, "sample_C": { "muts": [], "sequence": "AAAACAAAAATGCCCTGTGGGTAAAAAAAAAAAAACTACTTGACCATAAA" } }, "reference": { "nuc": "AAAAAAAAAATGCCCTGCGGGTAAAAAAAAAAAAACTACTTGACCATAAA" } }augur-24.2.2/tests/functional/ancestral/data/simple-genome/reference.fasta000066400000000000000000000001031456376326500266470ustar00rootroot00000000000000>reference_name AAAAAAAAAATGCCCTGCGGGTAAAAAAAAAAAAACTACTTGACCATAAA augur-24.2.2/tests/functional/ancestral/data/simple-genome/sequences.fasta000066400000000000000000000002671456376326500267170ustar00rootroot00000000000000>sample_A AAAACAGAAATGCTCTGCGGGTAAAAAAAAAACAACTATTTGTCCATAAA >sample_B AAAACAGAAATGCTCTGCGGGTAAAAAAAAAAGAACTACTTATCCATAAA >sample_C AAAACAAAAATGCCCTGTGGGTAAAAANNNAAAAACTACTTGACCATAAA augur-24.2.2/tests/functional/ancestral/data/simple-genome/snps.vcf000066400000000000000000000007231456376326500253640ustar00rootroot00000000000000##fileformat=VCFv4.3 ##contig= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT sample_A sample_B sample_C 1 5 . A C . . . GT 1 1 1 1 7 . A G . . . GT 1 1 0 1 14 . C T . . . GT 1 1 0 1 18 . C T . . . GT 0 0 1 1 28 . A N . . . GT 0 0 1 1 29 . A N . . . GT 0 0 1 1 30 . A N . . . GT 0 0 1 1 33 . A C,G . . . GT 1 2 0 1 39 . C T . . . GT 1 0 0 1 42 . G A . . . GT 0 1 0 1 43 . A T . . . GT 1 1 0 augur-24.2.2/tests/functional/ancestral/data/simple-genome/tree.nwk000066400000000000000000000001101456376326500253470ustar00rootroot00000000000000(sample_C:0.02,(sample_B:0.02,sample_A:0.02)node_AB:0.06)node_root:0.02;augur-24.2.2/tests/functional/ancestral/data/tree.nwk000066400000000000000000000007311456376326500226170ustar00rootroot00000000000000((Colombia/2016/ZC204Se:0.00105368,(PAN/CDC_259359_V1_V3/2015:0.00076051,(COL/FLR_00008/2015:0.00044440,VEN/UF_1/2016:0.00089377)NODE_0000008:0.00038502)NODE_0000007:0.00019253)NODE_0000001:0.00080159,(BRA/2016/FC_6706:0.00214920,(ZKC2/2016:0.00173693,(HND/2016/HU_ME59:0.00206150,PRVABC59:0.00135309)NODE_0000004:0.00013537,(EcEs062_16:0.00175918,DOM/2016/BB_0183:0.00184905)NODE_0000002:0.00021565)NODE_0000003:0.00013737)NODE_0000005:0.00019772)NODE_0000006:0.00100000; augur-24.2.2/tests/functional/ancestral/data/zika_outgroup.gb000066400000000000000000000520151456376326500243550ustar00rootroot00000000000000LOCUS PF13/251013_18 10769 bp DNA VRL 05-JUL-2016 DEFINITION Zika virus strain PF13/251013-18, complete genome. ACCESSION KX369547 VERSION KX369547.1 GI:1040461413 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 10769) AUTHORS Troesemeier,J.-H., Musso,D., Bluemel,J. and Baylis,S.A. TITLE Genome sequence of a candidate World Health Organization reference strain for Zika virus for nucleic acid testing JOURNAL Unpublished REFERENCE 2 (bases 1 to 10769) AUTHORS Troesemeier,J.-H., Musso,D., Bluemel,J. and Baylis,S.A. TITLE Direct Submission JOURNAL Submitted (08-JUN-2016) Microbiology, Paul-Ehrlich-Institute, Paul-Ehrlich-Str. 51-59, Langen, Hessen 63225, Germany COMMENT ##Assembly-Data-START## Assembly Method :: MIRA v. 4.0.2; BWA v. 0.7.13 Coverage :: 120 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10769 /collection_date="25-Oct-2013" /country="French Polynesia" /db_xref="taxon:64320" /host="Homo sapiens" /isolation_source="serum" /mol_type="genomic RNA" /organism="Zika virus" /strain="PF13/251013-18" 5'UTR 1..90 CDS 91..10362 /codon_start=1 /db_xref="GI:1040461414" /product="polyprotein" /protein_id="ANN44857.1" /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIR MVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRR GADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDL GHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVTLPSH STRKLQTRSQTWLESREYTKHLIRVENWIFRNPGLALAAAAIAWLLGSSTSQKVIYLVM ILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTV SNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFG KGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVE ITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHA GADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSS GHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQM AVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSG STIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWF SQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGCSVDFSKKETRCGTG VFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSRMENIMWRSVEGELNA ILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGKSYFVRAAKTNNSFVVD GDTLKECPLEHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECDPAVIGTAVKGKEAVH SDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESDLIIPKSLAGPLSHH NTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRSTTASGRVIEEWCC RECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTAGSTDHMDHFSLGVLVILLMV QEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAILMGATFAEMNTGGDVAHLAL IAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISALEGDLMVLINGFALAWLA IRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPF VMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSEVLTAVGLICALAGGFAKADIEMAG PMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKDAEVTGNSPRLDVALDESGDFSLVED DGPPMREIILKVVLMTICGMNPIAIPFAAGAWYVYVKTGKRSGALWDVPAPKEVKKGET TDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRSGEGRLDPYWGDVKQDLV SYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKDGDIGAVALDYPAGTSG SPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFEPSMLKKKQLTVLDLH PGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLPVRYMTTAVNVTHSG TEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGYISTRVEMGEAAAI FMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTVWFVPSVRNGNEI AACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKADRVIDSRRCLK PVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEA RMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQV ASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKS FKEFAAGKRGAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPE TLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVL IVVFLLLVVLIPEPEKQRSPQDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMG RREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVL FGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQ KRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEA GALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGG TGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKL RWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGW NIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQL LLGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDEN HPYRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFK EKVDTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEE EKEWKTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAI WYMWLGARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYAD DTAGWDTRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMD IISRQDQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSN GWDRLKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFC SHHFNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFH RRDLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDK TPVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST QVRYLGEEGSTPGVL" CDS 91..456 /product="capsid protein" /gene="CA" CDS 457..735 /product="propeptide" /gene="PRO" CDS 736..960 /product="membrane protein" /gene="MP" CDS 961..2472 /product="envelope protein" /gene="ENV" CDS 2473..3528 /product="NS1" /gene="NS1" CDS 3529..4206 /product="NS2A" /gene="NS2A" CDS 4207..4596 /product="NS2B" /gene="NS2B" CDS 4597..6447 /product="NS3" /gene="NS3" CDS 6448..6828 /product="NS4A" /gene="NS4A" CDS 6829..6897 /product="2K" /gene="2K" CDS 6898..7650 /product="NS4B" /gene="NS4B" CDS 7651..10359 /product="NS5" /gene="NS5" 3'UTR 10360..10769 ORIGIN 1 gaatcagact gcgacagttc gagtttgaag cgaaagctag caacagtatc aacaggtttt 61 atttggattt ggaaacgaga gtttctggtc atgaaaaacc caaaaaagaa atccggagga 121 ttccggattg tcaatatgct aaaacgcgga gtagcccgtg tgagcccctt tgggggcttg 181 aagaggctgc cagccggact tctgctgggt catgggccca tcaggatggt cttggcgatt 241 ctagcctttt tgagattcac ggcaatcaag ccatcactgg gtctcatcaa tagatggggt 301 tcagtgggga aaaaagaggc tatggaaata ataaagaagt tcaagaaaga tctggctgcc 361 atgctgagaa taatcaatgc taggaaggag aagaagagac gaggcgcaga tactagtgtc 421 ggaattgttg gcctcctgct gaccacagct atggcagcgg aggtcactag acgtgggagt 481 gcatactata tgtacttgga cagaaacgat gctggggagg ccatatcttt tccaaccaca 541 ttggggatga ataagtgtta tatacagatc atggatcttg gacacatgtg tgatgccacc 601 atgagctatg aatgccctat gctggatgag ggggtggaac cagatgacgt cgattgttgg 661 tgcaacacga cgtcaacttg ggttgtgtac ggaacctgcc atcacaaaaa aggtgaagca 721 cggagatcta gaagagctgt gacgctcccc tcccattcca ctagaaagct gcaaacgcgg 781 tcgcaaacct ggttggaatc aagagaatac acaaagcact tgattagagt cgaaaattgg 841 atattcagga accctggcct cgcgttagca gcagctgcca tcgcttggct tttgggaagc 901 tcaacgagcc aaaaagtcat atacttggtc atgatactgc tgattgcccc ggcatacagc 961 atcaggtgca taggagtcag caatagggac tttgtggaag gtatgtcagg tgggacttgg 1021 gttgatgttg tcttggaaca tggaggttgt gtcaccgtaa tggcacagga caaaccgact 1081 gtcgacatag agctggttac aacaacagtc agcaacatgg cggaggtaag atcctactgc 1141 tatgaggcat caatatcaga catggcttcg gacagccgct gcccaacaca aggtgaagcc 1201 taccttgaca agcaatcaga cactcaatat gtctgcaaaa gaacgttagt ggacagaggc 1261 tggggaaatg gatgtggact ttttggcaaa gggagcctgg tgacatgcgc taagtttgca 1321 tgctccaaga aaatgaccgg gaagagcatc cagccagaga atctggagta ccggataatg 1381 ctgtcagttc atggctccca gcacagtggg atgatcgtta atgacacagg acatgaaact 1441 gatgagaata gagcgaaggt tgagataacg cccaattcac caagagccga agccaccctg 1501 gggggttttg gaagcctagg acttgattgt gaaccgagga caggccttga cttttcagat 1561 ttgtattact tgactatgaa taacaagcac tggttggttc acaaggagtg gttccacgac 1621 attccattac cttggcacgc tggggcagac accggaactc cacactggaa caacaaagaa 1681 gcactggtag agttcaagga cgcacatgcc aaaaggcaaa ctgtcgtggt tctagggagt 1741 caagaaggag cagttcacac ggcccttgct ggagctctgg aggctgagat ggatggtgca 1801 aagggaaggc tgtcctctgg ccacttgaaa tgtcgcctga aaatggataa acttagattg 1861 aagggcgtgt catactcctt gtgtaccgca gcgttcacat tcaccaagat cccggctgaa 1921 acactgcacg ggacagtcac agtggaggta cagtacgcag ggacagatgg accttgcaag 1981 gttccagctc agatggcggt ggacatgcaa actctgaccc cagttgggag gttgataacc 2041 gctaaccccg taatcactga aagcactgag aactctaaga tgatgctgga acttgatcca 2101 ccatttgggg actcttacat tgtcatagga gtcggggaga agaagatcac ccaccactgg 2161 cacaggagtg gcagcaccat tggaaaagca tttgaagcca ctgtgagagg tgccaagaga 2221 atggcagtct tgggagacac agcctgggac tttggatcag ttggaggcgc tctcaactca 2281 ttgggcaagg gcatccatca aatttttgga gcagctttca aatcattgtt tggaggaatg 2341 tcctggttct cacaaattct cattggaacg ttgctgatgt ggttgggtct gaacacaaag 2401 aatggatcta tttcccttat gtgcttggcc ttagggggag tgttgatctt cttatccaca 2461 gccgtctctg ctgatgtggg gtgctcggtg gacttctcaa agaaggagac gagatgcggt 2521 acaggggtgt tcgtctataa cgacgttgaa gcctggaggg acaggtacaa gtaccatcct 2581 gactcccccc gtagattggc agcagcagtc aagcaagcct gggaagatgg tatctgtggg 2641 atctcctctg tttcaagaat ggaaaacatc atgtggagat cagtagaagg ggagctcaac 2701 gcaatcctgg aagagaatgg agttcaactg acggtcgttg tgggatctgt aaaaaacccc 2761 atgtggagag gtccacagag attgcccgtg cctgtgaacg agctgcccca cggctggaag 2821 gcttggggga aatcgtactt cgtcagagca gcaaagacaa ataacagctt tgtcgtggat 2881 ggtgacacac tgaaggaatg cccactcgaa catagagcat ggaacagctt tcttgtggag 2941 gatcatgggt tcggggtatt tcacactagt gtctggctca aggttagaga agattattca 3001 ttagagtgtg atccagccgt tattggaaca gctgttaagg gaaaggaggc tgtacacagt 3061 gatctaggct actggattga gagtgagaag aatgacacat ggaggctgaa gagggcccat 3121 ctgatcgaga tgaaaacatg tgaatggcca aagtcccaca cattgtggac agatggaata 3181 gaagagagtg atctgatcat acccaagtct ttagctgggc cactcagcca tcacaatacc 3241 agagagggct acaggaccca aatgaaaggg ccatggcaca gtgaagagct tgaaattcgg 3301 tttgaggaat gcccaggcac taaggtccac gtggaggaaa catgtggaac aagaggacca 3361 tctctgagat caaccactgc aagcggaagg gtgatcgagg aatggtgctg cagggagtgc 3421 acaatgcccc cactgtcgtt ccgggctaaa gatggctgtt ggtatggaat ggagataagg 3481 cccaggaaag aaccagaaag taacttagta aggtcaatgg tgactgcagg atcaactgat 3541 cacatggatc acttctccct tggagtgctt gtgattctgc tcatggtgca ggaagggctg 3601 aagaagagaa tgaccacaaa gatcatcata agcacatcaa tggcagtgct ggtagctatg 3661 atcctgggag gattttcaat gagtgacctg gctaagcttg caattttgat gggtgccacc 3721 ttcgcggaaa tgaacactgg aggagatgta gctcatctgg cgctgatagc ggcattcaaa 3781 gtcagaccag cgttgctggt atctttcatc ttcagagcta attggacacc ccgtgaaagc 3841 atgctgctgg ccttggcctc gtgtcttttg caaactgcga tctccgcctt ggaaggcgac 3901 ctgatggttc tcatcaatgg ttttgctttg gcctggttgg caatacgagc gatggttgtt 3961 ccacgcactg ataacatcac cttggcaatc ctggctgctc tgacaccact ggcccggggc 4021 acactgcttg tggcgtggag agcaggcctt gctacttgcg gggggtttat gctcctctct 4081 ctgaagggaa aaggcagtgt gaagaagaac ttaccatttg tcatggccct gggactaacc 4141 gctgtgaggc tggtcgaccc catcaacgtg gtgggactgc tgttgctcac aaggagtggg 4201 aagcggagct ggccccctag cgaagtactc acagctgttg gcctgatatg cgcattggct 4261 ggagggttcg ccaaggcaga tatagagatg gctgggccca tggccgcggt cggtctgcta 4321 attgtcagtt acgtggtctc aggaaagagt gtggacatgt acattgaaag agcaggtgac 4381 atcacatggg aaaaagatgc ggaagtcact ggaaacagtc cccggctcga tgtggcgcta 4441 gatgagagtg gtgatttctc cctggtggag gatgacggtc cccccatgag agagatcata 4501 ctcaaggtgg tcctgatgac catctgtggc atgaacccaa tagccatacc ctttgcagct 4561 ggagcgtggt acgtatacgt gaagactgga aaaaggagtg gtgctctatg ggatgtgcct 4621 gctcccaagg aagtaaaaaa gggggagacc acagatggag tgtacagagt aatgactcgt 4681 agactgctag gttcaacaca agttggagtg ggagttatgc aagagggggt ctttcacact 4741 atgtggcacg tcacaaaagg atccgcgctg agaagcggtg aagggagact tgatccatac 4801 tggggagatg tcaagcagga tctggtgtca tactgtggtc catggaagct agatgccgcc 4861 tgggacgggc acagcgaggt gcagctcttg gccgtgcccc ccggagagag agcgaggaac 4921 atccagactc tgcccggaat atttaagaca aaggatgggg acattggagc ggttgcgctg 4981 gattacccag caggaacttc aggatctcca atcctagaca agtgtgggag agtgatagga 5041 ctttatggca atggggtcgt gatcaaaaat gggagttatg ttagtgccat cacccaaggg 5101 aggagggagg aagagactcc tgttgagtgc ttcgagcctt cgatgctgaa gaagaagcag 5161 ctaactgtct tagacttgca tcctggagct gggaaaacca ggagagttct tcctgaaata 5221 gtccgtgaag ccataaaaac aagactccgt actgtgatct tagctccaac cagggttgtc 5281 gctgctgaaa tggaggaagc ccttagaggg cttccagtgc gttatatgac aacagcagtc 5341 aatgtcaccc actctggaac agaaatcgtc gacttaatgt gccatgccac cttcacttca 5401 cgtctactac agccaatcag agtccccaac tataatctgt atattatgga tgaggcccac 5461 ttcacagatc cctcaagtat agcagcaaga ggatacattt caacaagggt tgagatgggc 5521 gaggcggctg ccatcttcat gaccgccacg ccaccaggaa cccgtgacgc atttccggac 5581 tccaactcac caattatgga caccgaagtg gaagtcccag agagagcctg gagctcaggc 5641 tttgattggg tgacggatca ttctggaaaa acagtttggt ttgttccaag cgtgaggaac 5701 ggcaatgaga tcgcagcttg tctgacaaag gctggaaaac gggtcataca gctcagcaga 5761 aagacttttg agacagagtt ccagaaaaca aaacatcaag agtgggactt tgtcgtgaca 5821 actgacattt cagagatggg cgccaacttt aaagctgacc gtgtcataga ttccaggaga 5881 tgcctaaagc cggtcatact tgatggcgag agagtcattc tggctggacc catgcctgtc 5941 acacatgcca gcgctgccca gaggaggggg cgcataggca ggaatcccaa caaacctgga 6001 gatgagtatc tgtatggagg tgggtgcgca gagactgacg aagaccatgc acactggctt 6061 gaagcaagaa tgctccttga caatatttac ctccaagatg gcctcatagc ctcgctctat 6121 cgacctgagg ccgacaaagt agcagccatt gagggagagt tcaagcttag gacggagcaa 6181 aggaagacct ttgtggaact catgaaaaga ggagatcttc ctgtttggct ggcctatcag 6241 gttgcatctg ccggaataac ctacacagat agaagatggt gctttgatgg cacgaccaac 6301 aacaccataa tggaagacag tgtgccggca gaggtgtgga ccagacacgg agagaaaaga 6361 gtgctcaaac cgaggtggat ggacgccaga gtttgttcag atcatgcggc cctgaagtca 6421 ttcaaggagt ttgccgctgg gaaaagagga gcggcttttg gagtgatgga agccctggga 6481 acactgccag gacacatgac agagagattc caggaagcca ttgacaacct cgctgtgctc 6541 atgcgggcag agactggaag caggccttac aaagccgcgg cggcccaatt gccggagacc 6601 ctagagacca ttatgctttt ggggttgctg ggaacagtct cgctgggaat ctttttcgtc 6661 ttgatgagga acaagggcat agggaagatg ggctttggaa tggtgactct tggggccagc 6721 gcatggctca tgtggctctc ggaaattgag ccagccagaa ttgcatgtgt cctcattgtt 6781 gtgttcctat tgctggtggt gctcatacct gagccagaaa agcaaagatc tccccaggac 6841 aaccaaatgg caatcatcat catggtagca gtaggtcttc tgggcttgat taccgccaat 6901 gaactcggat ggttggagag aacaaagagt gacctaagcc atctaatggg aaggagagag 6961 gagggggcaa ccataggatt ctcaatggac attgacctgc ggccagcctc agcttgggcc 7021 atctatgctg ccttgacaac tttcattacc ccagccgtcc aacatgcagt gaccacttca 7081 tacaacaact actccttaat ggcgatggcc acgcaagctg gagtgttgtt tggtatgggc 7141 aaagggatgc cattctacgc atgggacttt ggagtcccgc tgctaatgat aggttgctac 7201 tcacaattaa cacccctgac cctaatagtg gccatcattt tgctcgtggc gcactacatg 7261 tacttgatcc cagggctgca ggcagcagct gcgcgtgctg cccagaagag aacggcagct 7321 ggcatcatga agaaccctgt tgtggatgga atagtggtga ctgacattga cacaatgaca 7381 attgaccccc aagtggagaa aaagatggga caggtgctac tcatagcagt agccgtctcc 7441 agcgccatac tgtcgcggac cgcctggggg tggggggagg ctggggccct gatcacagct 7501 gcaacttcca ctttgtggga aggctctccg aacaagtact ggaactcctc tacagccact 7561 tcactgtgta acatttttag gggaagttac ttggctggag cttctctaat ctacacagta 7621 acaagaaacg ctggcttggt caagagacgt gggggtggaa caggagagac cctgggagag 7681 aaatggaagg cccgcttgaa ccagatgtcg gccctggagt tctactccta caaaaagtca 7741 ggcatcaccg aggtgtgcag agaagaggcc cgccgcgccc tcaaggacgg tgtggcaacg 7801 ggaggccatg ctgtgtcccg aggaagtgca aagctgagat ggttggtgga gcggggatac 7861 ctgcagccct atggaaaggt cattgatctt ggatgtggca gagggggctg gagttactac 7921 gccgccacca tccgcaaagt tcaagaagtg aaaggataca caaaaggagg ccctggtcat 7981 gaagaaccca tgttggtgca aagctatggg tggaacatag tccgtcttaa gagtggggtg 8041 gacgtctttc atatggcggc tgagccgtgt gacacgttgc tgtgtgacat aggtgagtca 8101 tcatctagtc ctgaagtgga agaagcacgg acgctcagag tcctctccat ggtgggggat 8161 tggcttgaaa aaagaccagg agccttttgt ataaaagtgt tgtgcccata caccagcact 8221 atgatggaaa ccctggagcg actgcagcgt aggtatgggg gaggactggt cagagtgcca 8281 ctctcccgca actctacaca tgagatgtac tgggtctctg gagcgaaaag caacaccata 8341 aaaagtgtgt ccaccacgag ccagctcctc ttggggcgca tggacgggcc caggaggcca 8401 gtgaaatatg aggaggatgt gaatctcggc tctggcacgc gggctgtggt aagctgcgct 8461 gaagctccca acatgaagat cattggtaac cgcattgaaa ggatccgcag tgagcacgcg 8521 gaaacgtggt tctttgacga gaaccaccca tataggacat gggcttacca tggaagctat 8581 gaggccccca cacaagggtc agcgtcctct ctaataaacg gggttgtcag gctcctgtca 8641 aaaccctggg atgtggtgac tggagtcaca ggaatagcca tgaccgacac cacaccgtat 8701 ggtcagcaaa gagttttcaa ggaaaaagtg gacactaggg tgccagaccc ccaagaaggc 8761 actcgtcagg ttatgagcat ggtctcttcc tggttgtgga aagagctagg caaacacaaa 8821 cggccacgag tctgtaccaa agaagagttc atcaacaagg ttcgtagcaa tgcagcatta 8881 ggggcaatat ttgaagagga aaaagagtgg aagactgcag tggaagctgt gaacgatcca 8941 aggttctggg ctctagtgga caaggaaaga gagcaccacc tgagaggaga gtgccagagt 9001 tgtgtgtaca acatgatggg aaaaagagaa aagaaacaag gggaatttgg aaaggccaag 9061 ggcagccgcg ccatctggta tatgtggcta ggggctagat ttctagagtt cgaagccctt 9121 ggattcttga acgaggatca ctggatgggg agagagaact caggaggtgg tgttgaaggg 9181 ctgggattac aaagactcgg atatgtccta gaagagatga gtcgcatacc aggaggaagg 9241 atgtatgcag atgacactgc tggctgggac acccgcatca gcaggtttga tctggagaat 9301 gaagctctaa tcaccaacca aatggagaaa gggcacaggg ccttggcatt ggccataatc 9361 aagtacacat accaaaacaa agtggtaaag gtccttagac cagctgaaaa agggaagaca 9421 gttatggaca ttatttcgag acaagaccaa agggggagcg gacaagttgt cacttacgct 9481 cttaacacat ttaccaacct agtggtgcaa ctcattcgga atatggaggc tgaggaagtt 9541 ctagagatgc aagacttgtg gctgctgcgg aggtcagaga aagtgaccaa ctggttgcag 9601 agcaacggat gggataggct caaacgaatg gcagtcagtg gagatgattg cgttgtgaag 9661 ccaattgatg ataggtttgc acatgccctc aggttcttga atgatatggg aaaagttagg 9721 aaggacacac aagagtggaa accctcaact ggatgggaca actgggaaga agttccgttt 9781 tgctcccacc acttcaacaa gctccatctc aaggacggga ggtccattgt ggttccctgc 9841 cgccaccaag atgaactgat tggccgggcc cgcgtctctc caggggcggg atggagcatc 9901 cgggagactg cttgcctagc aaaatcatat gcgcaaatgt ggcagctcct ttatttccac 9961 agaagggacc tccgactgat ggccaatgcc atttgttcat ctgtgccagt tgactgggtt 10021 ccaactggga gaactacctg gtcaatccat ggaaagggag aatggatgac cactgaagac 10081 atgcttgtgg tgtggaacag agtgtggatt gaggagaacg accacatgga agacaagacc 10141 ccagttacga aatggacaga cattccctat ttgggaaaaa gggaagactt gtggtgtgga 10201 tctctcatag ggcacagacc gcgcaccacc tgggctgaga acattaaaaa cacagtcaac 10261 atggtgcgca ggatcatagg tgatgaagaa aagtacatgg actacctatc cacccaagtt 10321 cgctacttgg gtgaagaagg gtctacacct ggagtgctgt aagcaccaat cttagtgttg 10381 tcaggcctgc tagtcagcca cagcttgggg aaagctgtgc agcctgtgac ccccccagga 10441 gaagctggga aaccaagcct atagtcaggc cgagaacgcc atggcacgga agaagccatg 10501 ctgcctgtga gcccctcaga ggacactgag tcaaaaaacc ccacgcgctt ggaggcgcag 10561 gatgggaaaa gaaggtggcg accttcccca cccttcaatc tggggcctga actggagatc 10621 agctgtggat ctccagaaga gggactagtg gttagaggag accccccgga aaacgcaaaa 10681 cagcatattg acgctgggaa agaccagaga ctccatgagt ttccaccacg ctggccgcca 10741 ggcacagatc gccgaatagc ggcggccgg // augur-24.2.2/tests/functional/clades.t000066400000000000000000000071061456376326500176750ustar00rootroot00000000000000Integration tests for augur clades. $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../bin/augur}" Test augur clades with simple Zika input files and hierarchical clades. $ ${AUGUR} clades \ > --tree clades/tree.nwk \ > --mutations clades/aa_muts.json clades/nt_muts_small.json \ > --clades clades/clades.tsv \ > --output-node-data "$TMP/clades.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" clades/clades.json "$TMP/clades.json" \ > --exclude-paths "root['generated_by']" {} Test custom membership key + label key. The only change should be the key names $ ${AUGUR} clades \ > --tree clades/tree.nwk \ > --mutations clades/aa_muts.json clades/nt_muts_small.json \ > --clades clades/clades.tsv \ > --membership-name lineage --label-name origin \ > --output-node-data "$TMP/clades_custom.json" &>/dev/null $ cat "$TMP/clades_custom.json" | sed "s/lineage/clade_membership/" | sed "s/origin/clade/" > "$TMP/clades_sed.json" $ python3 "$TESTDIR/../../scripts/diff_jsons.py" clades/clades.json "$TMP/clades_sed.json" \ > --exclude-paths "root['generated_by']" {} Test the ability to _not_ export a branch label (same logic as not exporting the membership) $ ${AUGUR} clades \ > --tree clades/tree.nwk \ > --mutations clades/aa_muts.json clades/nt_muts_small.json \ > --clades clades/clades.tsv \ > --label-name none \ > --output-node-data "$TMP/clades_no-labels.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" clades/clades.json "$TMP/clades_no-labels.json" \ > --exclude-paths "root['generated_by']" {'dictionary_item_removed': [root['branches']]} A clade which exists at the root is not identified by inferring the root state (i.e. we don't infer the root state to be A if we observe a subsequent A10T mutation) This is an oversight and ideally would be fixed $ ${AUGUR} clades \ > --tree clades/toy_tree.nwk \ > --mutations clades/toy_muts_no_ref.json \ > --clades clades/toy_clades_nuc.tsv \ > --output-node-data "$TMP/toy_clades_1.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" clades/toy_clades_1.json "$TMP/toy_clades_1.json" \ > --exclude-paths "root['generated_by']" {} A clade which exists at the root is identified (and correctly propogated) if the root sequence is explicitly set. $ ${AUGUR} clades \ > --tree clades/toy_tree.nwk \ > --mutations clades/toy_muts_ref.json \ > --clades clades/toy_clades_nuc.tsv \ > --output-node-data "$TMP/toy_clades_2a.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" clades/toy_clades_2.json "$TMP/toy_clades_2a.json" \ > --exclude-paths "root['generated_by']" {} A clade which exists at the root is identified (and correctly propogated) without a root sequence if the (branch leading to the) root has the clade-defining mutation. $ ${AUGUR} clades \ > --tree clades/toy_tree.nwk \ > --mutations clades/toy_muts_explicit_root_mutation.json \ > --clades clades/toy_clades_nuc.tsv \ > --output-node-data "$TMP/toy_clades_2b.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" clades/toy_clades_2.json "$TMP/toy_clades_2b.json" \ > --exclude-paths "root['generated_by']" {} Multiple mutations at the same position on a single branch are a fatal error $ ${AUGUR} clades \ > --tree clades/toy_tree.nwk \ > --mutations clades/toy_muts_multiple.json \ > --clades clades/toy_clades_nuc.tsv ERROR: Multiple mutations at the same position on a single branch were found: Node A (nuc), Node AB (geneName) [2]augur-24.2.2/tests/functional/clades/000077500000000000000000000000001456376326500175045ustar00rootroot00000000000000augur-24.2.2/tests/functional/clades/aa_muts.json000066400000000000000000000127551456376326500220420ustar00rootroot00000000000000{ "nodes": { "BRA/2016/FC_6706": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "COL/FLR_00008/2015": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [ "L169I", "G292E" ], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "Colombia/2016/ZC204Se": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [ "N17K" ] } }, "DOM/2016/BB_0183": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [ "D208G" ], "NS2A": [ "L152M" ], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [ "I322V", "Q650R", "D878E" ], "PRO": [] } }, "EcEs062_16": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "HND/2016/HU_ME59": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [ "G100A" ], "NS2A": [], "NS2B": [], "NS3": [ "M572L" ], "NS4A": [], "NS4B": [], "NS5": [ "R525C" ], "PRO": [] } }, "NODE_0000001": { "aa_muts": { "2K": [], "CA": [ "D107E" ], "ENV": [], "MP": [], "NS1": [ "R324W" ], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [ "T833A" ], "PRO": [] } }, "NODE_0000002": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [ "M349V" ], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "NODE_0000003": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "NODE_0000004": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "NODE_0000005": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "NODE_0000006": { "aa_muts": {} }, "NODE_0000007": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "NODE_0000008": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "PAN/CDC_259359_V1_V3/2015": { "aa_muts": { "2K": [], "CA": [], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [ "M32I" ], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [], "PRO": [] } }, "PRVABC59": { "aa_muts": { "2K": [], "CA": [ "I80T" ], "ENV": [], "MP": [], "NS1": [], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [ "A91V" ], "PRO": [] } }, "VEN/UF_1/2016": { "aa_muts": { "2K": [], "CA": [ "E76D" ], "ENV": [], "MP": [], "NS1": [ "T301P" ], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [ "A833T" ], "PRO": [] } }, "ZKC2/2016": { "aa_muts": { "2K": [], "CA": [ "S109N" ], "ENV": [ "K419R" ], "MP": [], "NS1": [ "R324Q" ], "NS2A": [], "NS2B": [], "NS3": [], "NS4A": [], "NS4B": [], "NS5": [ "V114M", "N624S", "K670R" ], "PRO": [] } } } } augur-24.2.2/tests/functional/clades/clades.json000066400000000000000000000030211456376326500216260ustar00rootroot00000000000000{ "generated_by": { "program": "augur", "version": "13.1.2" }, "nodes": { "BRA/2016/FC_6706": { "clade_membership": "unassigned" }, "COL/FLR_00008/2015": { "clade_membership": "B.1" }, "Colombia/2016/ZC204Se": { "clade_membership": "B" }, "DOM/2016/BB_0183": { "clade_membership": "A" }, "EcEs062_16": { "clade_membership": "A" }, "HND/2016/HU_ME59": { "clade_membership": "A.1" }, "NODE_0000001": { "clade_membership": "B" }, "NODE_0000002": { "clade_membership": "A" }, "NODE_0000003": { "clade_membership": "A" }, "NODE_0000004": { "clade_membership": "A.1" }, "NODE_0000005": { "clade_membership": "unassigned" }, "NODE_0000006": { "clade_membership": "unassigned" }, "NODE_0000007": { "clade_membership": "B" }, "NODE_0000008": { "clade_membership": "B.1" }, "PAN/CDC_259359_V1_V3/2015": { "clade_membership": "B" }, "PRVABC59": { "clade_membership": "A.1" }, "VEN/UF_1/2016": { "clade_membership": "B.1" }, "ZKC2/2016": { "clade_membership": "A" } }, "branches": { "NODE_0000001": { "labels": { "clade": "B" } }, "NODE_0000003": { "labels": { "clade": "A" } }, "NODE_0000004": { "labels": { "clade": "A.1" } }, "NODE_0000008": { "labels": { "clade": "B.1" } } } }augur-24.2.2/tests/functional/clades/clades.tsv000066400000000000000000000002321456376326500214720ustar00rootroot00000000000000clade gene site alt A nuc 2517 C A nuc 3972 T B CA 107 E B NS1 324 W # Inherited, nested clade A.1 clade A A.1 nuc 5298 G B.1 clade B B.1 nuc 2895 Aaugur-24.2.2/tests/functional/clades/nt_muts_small.json000066400000000000000000000100001456376326500232470ustar00rootroot00000000000000{ "nodes": { "BRA/2016/FC_6706": { "muts": [ "T876C", "C2646T", "A4341G", "C5988T", "T6618C", "A7116G", "C7488T", "T7506C", "G8040A", "A8820G", "C9066T", "T9717C" ] }, "COL/FLR_00008/2015": { "muts": [ "T1506C", "C2977A", "G3347A", "G5655A", "T8445C" ] }, "Colombia/2016/ZC204Se": { "muts": [ "C507A", "C1233T", "C2163T", "T7843C", "T10332C" ] }, "DOM/2016/BB_0183": { "muts": [ "T489C", "T2043C", "T2358C", "T2418C", "C2700T", "T2724C", "T2823C", "C2844T", "A3095G", "T3982A", "C5232T", "C5352T", "T5823C", "C6105T", "C6261T", "T6891C", "T8028C", "G8604A", "A8614G", "C9270T", "G9294A", "A9599G", "T10284G", "T10632C" ] }, "EcEs062_16": { "muts": [ "T1275C", "T1858C", "T2409C", "A2754G", "A3780G", "G4971T", "C5532T", "G5751A", "G6453C", "A6873G", "C8232A", "T8553C", "C8850T", "A9420G", "G9933T", "C10098T", "A10347G", "T10372C" ] }, "HND/2016/HU_ME59": { "muts": [ "G2771C", "G3600A", "G3846A", "T4716C", "G4767A", "T4888C", "G5178A", "A6310C", "T6708C", "C6720T", "A6945G", "C9223T", "T9516C" ] }, "NODE_0000001": { "muts": [ "T411A", "T738C", "C858T", "G864T", "C1381T", "C3442T", "A3894G", "C5991T", "C9279T", "A10147G" ] }, "NODE_0000002": { "muts": [ "A3517G", "G6966A" ] }, "NODE_0000003": { "muts": [ "T2517C", "C3972T" ] }, "NODE_0000004": { "muts": [ "A5298G" ] }, "NODE_0000005": { "muts": [] }, "NODE_0000006": { "muts": [] }, "NODE_0000007": { "muts": [ "T1029C", "T3705C" ] }, "NODE_0000008": { "muts": [ "G2895A", "T3804C", "C4311T", "T4605G", "C6643T", "T8862G" ] }, "PAN/CDC_259359_V1_V3/2015": { "muts": [ "G23A", "A35T", "G40A", "T2538C", "A3750G", "G3771A", "G4302A", "C7056T", "T10344C" ] }, "PRVABC59": { "muts": [ "T329C", "T762C", "G1170T", "G1458A", "A1482G", "C1887T", "C2838T", "T3549C", "T3576C", "C4866T", "T5070C", "T5139C", "T6612A", "T6654C", "T7077C", "T7134C", "C7488T", "C7922T", "T8835C", "T9000C", "C9225T", "C9279T" ] }, "VEN/UF_1/2016": { "muts": [ "A3C", "G318T", "G438T", "C1233T", "C1416T", "A3373C", "C8016T", "G10147A" ] }, "ZKC2/2016": { "muts": [ "T249C", "G416A", "C789T", "A1158G", "T2032C", "T2076C", "A2216G", "C2637T", "T3321C", "G3443A", "C3501T", "C4428T", "T4602A", "A4671G", "T4740C", "T5286C", "T5676C", "T6405C", "C6475T", "T7026C", "G7230A", "C7500T", "G7990A", "C8145T", "T8391C", "T8652C", "C8748T", "A9417G", "A9521G", "T9595C", "A9659G", "A9711G", "A9768G", "A10375G", "C10596T" ] } } } augur-24.2.2/tests/functional/clades/toy_clades_1.json000066400000000000000000000007251456376326500227510ustar00rootroot00000000000000{ "branches": { "A": { "labels": { "clade": "clade_2" } } }, "generated_by": { "program": "augur", "version": "21.1.0" }, "nodes": { "A": { "clade_membership": "clade_2" }, "AB": { "clade_membership": "unassigned" }, "B": { "clade_membership": "unassigned" }, "C": { "clade_membership": "unassigned" }, "ROOT": { "clade_membership": "unassigned" } } }augur-24.2.2/tests/functional/clades/toy_clades_2.json000066400000000000000000000010231456376326500227420ustar00rootroot00000000000000{ "branches": { "A": { "labels": { "clade": "clade_2" } }, "ROOT": { "labels": { "clade": "clade_1" } } }, "generated_by": { "program": "augur", "version": "21.1.0" }, "nodes": { "A": { "clade_membership": "clade_2" }, "AB": { "clade_membership": "clade_1" }, "B": { "clade_membership": "clade_1" }, "C": { "clade_membership": "clade_1" }, "ROOT": { "clade_membership": "clade_1" } } }augur-24.2.2/tests/functional/clades/toy_clades_nuc.tsv000066400000000000000000000000651456376326500232360ustar00rootroot00000000000000clade gene site alt clade_1 nuc 10 A clade_2 nuc 10 Taugur-24.2.2/tests/functional/clades/toy_muts_explicit_root_mutation.json000066400000000000000000000001501456376326500271420ustar00rootroot00000000000000{ "nodes": { "ROOT": { "muts": ["C10A"] }, "A": { "muts": ["A10T"] } } }augur-24.2.2/tests/functional/clades/toy_muts_multiple.json000066400000000000000000000003541456376326500241770ustar00rootroot00000000000000{ "nodes": { "A": { "muts": ["A10T", "T10C"] }, "AB": { "aa_muts": { "geneName": ["S42L", "R42H", "Y50W"] } }, "B": { "muts": ["A10T", "T11C"] } } }augur-24.2.2/tests/functional/clades/toy_muts_no_ref.json000066400000000000000000000000741456376326500236130ustar00rootroot00000000000000{ "nodes": { "A": { "muts": ["A10T"] } } }augur-24.2.2/tests/functional/clades/toy_muts_ref.json000066400000000000000000000001601456376326500231130ustar00rootroot00000000000000{ "nodes": { "ROOT": { "sequence": "AAAAAAAAAA" }, "A": { "muts": ["A10T"] } } }augur-24.2.2/tests/functional/clades/toy_tree.nwk000066400000000000000000000000451456376326500220560ustar00rootroot00000000000000((A:0.5,B:0.3)AB:0.8,C:0.3)ROOT:0.2; augur-24.2.2/tests/functional/clades/tree.nwk000066400000000000000000000007311456376326500211650ustar00rootroot00000000000000((Colombia/2016/ZC204Se:0.00105368,(PAN/CDC_259359_V1_V3/2015:0.00076051,(COL/FLR_00008/2015:0.00044440,VEN/UF_1/2016:0.00089377)NODE_0000008:0.00038502)NODE_0000007:0.00019253)NODE_0000001:0.00080159,(BRA/2016/FC_6706:0.00214920,(ZKC2/2016:0.00173693,(HND/2016/HU_ME59:0.00206150,PRVABC59:0.00135309)NODE_0000004:0.00013537,(EcEs062_16:0.00175918,DOM/2016/BB_0183:0.00184905)NODE_0000002:0.00021565)NODE_0000003:0.00013737)NODE_0000005:0.00019772)NODE_0000006:0.00100000; augur-24.2.2/tests/functional/curate/000077500000000000000000000000001456376326500175345ustar00rootroot00000000000000augur-24.2.2/tests/functional/curate/cram/000077500000000000000000000000001456376326500204565ustar00rootroot00000000000000augur-24.2.2/tests/functional/curate/cram/_setup.sh000066400000000000000000000000701456376326500223060ustar00rootroot00000000000000export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" augur-24.2.2/tests/functional/curate/cram/format_dates.t000066400000000000000000000115751456376326500233240ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create NDJSON file for testing format_dates with different forms $ cat >records.ndjson <<~~ > {"record": 1, "date": "2020", "collectionDate": "2020-01", "releaseDate": "2020-01","updateDate": "2020-07-18T00:00:00Z"} > ~~ Test output with matching expected date formats. $ cat records.ndjson \ > | ${AUGUR} curate format-dates \ > --date-fields "date" "collectionDate" "releaseDate" "updateDate" \ > --expected-date-formats "%Y" "%Y-%m" "%Y-%m-%dT%H:%M:%SZ" {"record": 1, "date": "2020-XX-XX", "collectionDate": "2020-01-XX", "releaseDate": "2020-01-XX", "updateDate": "2020-07-18"} Test output with unmatched expected date formats with default `ERROR_FIRST` failure reporting. This is expected to fail with an error, so redirecting stdout since we don't care about the output. $ cat records.ndjson \ > | ${AUGUR} curate format-dates \ > --date-fields "date" "collectionDate" "releaseDate" "updateDate" \ > --expected-date-formats "%Y" "%Y-%m-%dT%H:%M:%SZ" 1> /dev/null ERROR: Unable to format date string '2020-01' in field 'collectionDate' of record 0. [2] Test output with unmatched expected date formats with `ERROR_ALL` failure reporting. This is expected to fail with an error, so redirecting stdout since we don't care about the output. $ cat records.ndjson \ > | ${AUGUR} curate format-dates \ > --date-fields "date" "collectionDate" "releaseDate" "updateDate" \ > --expected-date-formats "%Y" "%Y-%m-%dT%H:%M:%SZ" \ > --failure-reporting "error_all" 1> /dev/null ERROR: Unable to format dates for the following (record, field, date string): (0, 'collectionDate', '2020-01') (0, 'releaseDate', '2020-01') [2] Test output with unmatched expected date formats while warning on failures. This is expected to print warnings for failures and return the masked date strings for failures. $ cat records.ndjson \ > | ${AUGUR} curate format-dates \ > --date-fields "date" "collectionDate" "releaseDate" "updateDate" \ > --expected-date-formats "%Y" "%Y-%m-%dT%H:%M:%SZ" \ > --failure-reporting "warn" WARNING: Unable to format date string '2020-01' in field 'collectionDate' of record 0. WARNING: Unable to format date string '2020-01' in field 'releaseDate' of record 0. WARNING: Unable to format dates for the following (record, field, date string): (0, 'collectionDate', '2020-01') (0, 'releaseDate', '2020-01') {"record": 1, "date": "2020-XX-XX", "collectionDate": "XXXX-XX-XX", "releaseDate": "XXXX-XX-XX", "updateDate": "2020-07-18"} Test output with unmatched expected date formats while silencing failures. This is expected to return the masked date strings for failures. $ cat records.ndjson \ > | ${AUGUR} curate format-dates \ > --date-fields "date" "collectionDate" "releaseDate" "updateDate" \ > --expected-date-formats "%Y" "%Y-%m-%dT%H:%M:%SZ" \ > --failure-reporting "silent" {"record": 1, "date": "2020-XX-XX", "collectionDate": "XXXX-XX-XX", "releaseDate": "XXXX-XX-XX", "updateDate": "2020-07-18"} Test output with unmatched expected date formats while silencing failures with `--no-mask-failure`. This is expected to return the date strings in their original format. $ cat records.ndjson \ > | ${AUGUR} curate format-dates \ > --date-fields "date" "collectionDate" "releaseDate" "updateDate" \ > --expected-date-formats "%Y" "%Y-%m-%dT%H:%M:%SZ" \ > --failure-reporting "silent" \ > --no-mask-failure {"record": 1, "date": "2020-XX-XX", "collectionDate": "2020-01", "releaseDate": "2020-01", "updateDate": "2020-07-18"} Test output with multiple matching expected date formats. Date with multiple matches will be parsed according to first matching format. The "collectionDate" and "releaseDate" will match the first "%Y-%j" format, which is a complete date. $ cat records.ndjson \ > | ${AUGUR} curate format-dates \ > --date-fields "date" "collectionDate" "releaseDate" "updateDate" \ > --expected-date-formats "%Y" "%Y-%j" "%Y-%m" "%Y-%m-%dT%H:%M:%SZ" {"record": 1, "date": "2020-XX-XX", "collectionDate": "2020-01-01", "releaseDate": "2020-01-01", "updateDate": "2020-07-18"} Test output with chained format-dates commands that parses different fields with different expected formats. Since "collectionDate" and "releaseDate" have expected formats overlap, we can split them into two chained commands that parses them with different expected formats to produce the desired results. $ cat records.ndjson \ > | ${AUGUR} curate format-dates \ > --date-fields "date" "releaseDate" "updateDate" \ > --expected-date-formats "%Y" "%Y-%m" "%Y-%m-%dT%H:%M:%SZ" \ > | ${AUGUR} curate format-dates \ > --date-field "collectionDate" \ > --expected-date-formats "%Y-%j" {"record": 1, "date": "2020-XX-XX", "collectionDate": "2020-01-01", "releaseDate": "2020-01-XX", "updateDate": "2020-07-18"} augur-24.2.2/tests/functional/curate/cram/metadata-and-fasta-input.t000066400000000000000000000147541456376326500254270ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Testing combined metadata and FASTA inputs for the curate command. Running the `passthru` subcommand since it does not do any data transformations. Create FASTA file for testing. $ cat >sequences.fasta <<~~ > >sequence_A > ATCG > >sequence_B > TCGA > >sequence_C > CGAT > ~~ Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain country date > sequence_A USA 2020-10-01 > sequence_B USA 2020-10-02 > sequence_C USA 2020-10-03 > ~~ Test metadata input with extra FASTA input options without a FASTA file. This is expected to fail with an error. $ ${AUGUR} curate passthru \ > --metadata metadata.tsv \ > --seq-id-column name \ > --seq-field sequences ERROR: The --seq-id-column and --seq-field options should only be used when providing a FASTA file. [2] Test metadata and FASTA inputs without required FASTA input options. This is expected to fail with an error. $ ${AUGUR} curate passthru \ > --metadata metadata.tsv \ > --fasta sequences.fasta ERROR: The --seq-id-column and --seq-field options are required for a FASTA file input. [2] Test metadata and FASTA inputs with required FASTA input options. $ ${AUGUR} curate passthru \ > --metadata metadata.tsv \ > --fasta sequences.fasta \ > --seq-id-column strain \ > --seq-field seq {"strain": "sequence_A", "country": "USA", "date": "2020-10-01", "seq": "ATCG"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02", "seq": "TCGA"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03", "seq": "CGAT"} Create new metadata file with duplicate and extra metadata records. $ cp metadata.tsv metadata-with-duplicate-and-unmatched-records.tsv $ cat >>metadata-with-duplicate-and-unmatched-records.tsv <<~~ > sequence_A USA 2020-10-XX > extra_metadata_A USA 2020-10-01 > extra_metadata_B USA 2020-10-02 > ~~ Create new FASTA file with duplicate and extra sequence records. $ cp sequences.fasta sequences-with-duplicate-and-unmatched-records.fasta $ cat >>sequences-with-duplicate-and-unmatched-records.fasta <<~~ > >sequence_A > NNNN > >extra_sequence_A > ATCG > >extra_sequence_B > TCGA > ~~ Test metadata and FASTA inputs with duplicate and extra records and default `ERROR_FIRST` reporting. This is expected to fail with an error, so redirecting stdout since we don't care about the output. $ ${AUGUR} curate passthru \ > --metadata metadata-with-duplicate-and-unmatched-records.tsv \ > --fasta sequences-with-duplicate-and-unmatched-records.fasta \ > --seq-id-column strain \ > --seq-field seq 1> /dev/null ERROR: Encountered sequence record with duplicate id 'sequence_A'. [2] Test metadata and FASTA inputs with duplicate and extra records with `ERROR_ALL` reporting. This is expected to fail with an error, so redirecting stdout since we don't care about the output. $ ${AUGUR} curate passthru \ > --metadata metadata-with-duplicate-and-unmatched-records.tsv \ > --fasta sequences-with-duplicate-and-unmatched-records.fasta \ > --seq-id-column strain \ > --seq-field seq \ > --unmatched-reporting error_all \ > --duplicate-reporting error_all 1> /dev/null ERROR: Encountered the following error(s) when parsing metadata with sequences: The output may not match expectations because there were records with duplicate sequence ids. The following sequence ids were duplicated in .*metadata-with-duplicate-and-unmatched-records.* (re) 'sequence_A' The following sequence ids were duplicated in .*sequences-with-duplicate-and-unmatched-records.* (re) 'sequence_A' The output may be incomplete because there were unmatched records. The following metadata records did not have a matching sequence: 'extra_metadata_A' 'extra_metadata_B' The following sequence records did not have a matching metadata record: 'extra_sequence_A' 'extra_sequence_B' [2] Test metadata and FASTA inputs with unmatched records, but ask to only warn on unmatched and duplicates. This is expected run without error and only print a warning. Notice the duplicate sequence "sequence_A" will always use the first sequence in the FASTA file because of pyfastx. $ ${AUGUR} curate passthru \ > --metadata metadata-with-duplicate-and-unmatched-records.tsv \ > --fasta sequences-with-duplicate-and-unmatched-records.fasta \ > --seq-id-column strain \ > --seq-field seq \ > --unmatched-reporting warn \ > --duplicate-reporting warn WARNING: Encountered sequence record with duplicate id 'sequence_A'. WARNING: Encountered metadata record with duplicate id 'sequence_A'. WARNING: Encountered metadata record 'extra_metadata_A' without a matching sequence. WARNING: Encountered metadata record 'extra_metadata_B' without a matching sequence. WARNING: The output may not match expectations because there were records with duplicate sequence ids. The following sequence ids were duplicated in .*metadata-with-duplicate-and-unmatched-records.* (re) 'sequence_A' The following sequence ids were duplicated in .*sequences-with-duplicate-and-unmatched-records.* (re) 'sequence_A' WARNING: The output may be incomplete because there were unmatched records. The following metadata records did not have a matching sequence: 'extra_metadata_A' 'extra_metadata_B' The following sequence records did not have a matching metadata record: 'extra_sequence_A' 'extra_sequence_B' {"strain": "sequence_A", "country": "USA", "date": "2020-10-01", "seq": "ATCG"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02", "seq": "TCGA"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03", "seq": "CGAT"} {"strain": "sequence_A", "country": "USA", "date": "2020-10-XX", "seq": "ATCG"} Test metadata and FASTA inputs with unmatched records in both, but ask to silent unmatched and duplicates. Notice the duplicate sequence "sequence_A" will always use the first sequence in the FASTA file because of pyfastx. $ ${AUGUR} curate passthru \ > --metadata metadata-with-duplicate-and-unmatched-records.tsv \ > --fasta sequences-with-duplicate-and-unmatched-records.fasta \ > --seq-id-column strain \ > --seq-field seq \ > --unmatched-reporting silent \ > --duplicate-reporting silent {"strain": "sequence_A", "country": "USA", "date": "2020-10-01", "seq": "ATCG"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02", "seq": "TCGA"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03", "seq": "CGAT"} {"strain": "sequence_A", "country": "USA", "date": "2020-10-XX", "seq": "ATCG"} augur-24.2.2/tests/functional/curate/cram/metadata-and-fasta-output.t000066400000000000000000000054111456376326500256160ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Testing combined metadata and FASTA output for the curate command. Running the `passthru` subcommand since it does not do any data transformations. Create NDJSON file for testing. $ cat >records.ndjson <<~~ > {"strain": "sequence_A", "country": "USA", "date": "2020-10-01", "sequence": "AAAA"} > {"strain": "sequence_T", "country": "USA", "date": "2020-10-02", "sequence": "TTTT"} > {"strain": "sequence_C", "country": "USA", "date": "2020-10-03", "sequence": "CCCC"} > ~~ Test metadata output with extra FASTA output options. This is expected to fail immediately with an error. $ cat records.ndjson \ > | ${AUGUR} curate passthru \ > --output-metadata metadata.tsv \ > --output-id-field strain \ > --output-seq-field sequence ERROR: The --output-id-field and --output-seq-field options should only be used when requesting a FASTA output. [2] Test metadata and FASTA outputs without requried FASTA output options. This is expected to fail immediately with an error. $ cat records.ndjson \ > | ${AUGUR} curate passthru \ > --output-metadata metadata.tsv \ > --output-fasta sequences.fasta ERROR: The --output-id-field and --output-seq-field options are required for a FASTA output. [2] Test metadata and FASTA outputs $ cat records.ndjson \ > | ${AUGUR} curate passthru \ > --output-metadata metadata.tsv \ > --output-fasta sequences.fasta \ > --output-id-field strain \ > --output-seq-field sequence $ cat metadata.tsv strain\tcountry\tdate (esc) sequence_A\tUSA\t2020-10-01 (esc) sequence_T\tUSA\t2020-10-02 (esc) sequence_C\tUSA\t2020-10-03 (esc) $ cat sequences.fasta >sequence_A (esc) AAAA (esc) >sequence_T (esc) TTTT (esc) >sequence_C (esc) CCCC Test FASTA output without metadata output. $ cat records.ndjson \ > | ${AUGUR} curate passthru \ > --output-fasta sequences.fasta \ > --output-id-field strain \ > --output-seq-field sequence $ cat sequences.fasta >sequence_A (esc) AAAA (esc) >sequence_T (esc) TTTT (esc) >sequence_C (esc) CCCC Test FASTA output with bad output id field. This is expected to fail with an error. $ cat records.ndjson \ > | ${AUGUR} curate passthru \ > --output-fasta sequences.fasta \ > --output-id-field bogus_id \ > --output-seq-field sequence ERROR: Provided sequence identifier field 'bogus_id' does not exist. [2] Test FASTA output with bad output sequence field. This is expected to fail with an error. $ cat records.ndjson \ > | ${AUGUR} curate passthru \ > --output-fasta sequences.fasta \ > --output-id-field strain \ > --output-seq-field bogus_sequence ERROR: Provided sequence field 'bogus_sequence' does not exist. [2] augur-24.2.2/tests/functional/curate/cram/metadata-input.t000066400000000000000000000120561456376326500235640ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Testing metadata inputs for the curate command. Running the `passthru` subcommand since it does not do any data transformations. Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain country date authors > sequence_A USA 2020-10-01 A,B,C,D,E,F,G,H,I,J,K > sequence_B USA 2020-10-02 A,B,C,D,E,F,G,H,I,J,K > sequence_C USA 2020-10-03 A,B,C,D,E,F,G,H,I,J,K > ~~ Test TSV metadata input $ ${AUGUR} curate passthru \ > --metadata metadata.tsv {"strain": "sequence_A", "country": "USA", "date": "2020-10-01", "authors": "A,B,C,D,E,F,G,H,I,J,K"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02", "authors": "A,B,C,D,E,F,G,H,I,J,K"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03", "authors": "A,B,C,D,E,F,G,H,I,J,K"} Test TSV metadata input from stdin $ cat metadata.tsv \ > | ${AUGUR} curate normalize-strings \ > --metadata - {"strain": "sequence_A", "country": "USA", "date": "2020-10-01", "authors": "A,B,C,D,E,F,G,H,I,J,K"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02", "authors": "A,B,C,D,E,F,G,H,I,J,K"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03", "authors": "A,B,C,D,E,F,G,H,I,J,K"} Create metadata CSV file for testing. $ cat >metadata.csv <<~~ > strain,country,date > sequence_A,USA,2020-10-01 > sequence_B,USA,2020-10-02 > sequence_C,USA,2020-10-03 > ~~ Test CSV metadata input $ ${AUGUR} curate passthru \ > --metadata metadata.csv {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} Test CSV metadata input from stdin $ cat metadata.csv \ > | ${AUGUR} curate normalize-strings \ > --metadata - {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} Create a metadata TSV file with duplicate records $ cat >metadata.tsv <<~~ > strain country date > sequence_A USA 2020-10-01 > sequence_B USA 2020-10-02 > sequence_C USA 2020-10-03 > sequence_A USA 2020-10-01 > sequence_B USA 2020-10-02 > sequence_C USA 2020-10-03 > ~~ Test default options for duplicate records, which is expected for exit with an error on the first duplicate There will still be output due to the nature of the chained generators in augur curate. $ ${AUGUR} curate passthru \ > --metadata metadata.tsv ERROR: Encountered record with duplicate id 'sequence_A' in .* (re) {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} [2] Test error_all on duplicate records. $ ${AUGUR} curate passthru \ > --metadata metadata.tsv \ > --duplicate-reporting error_all ERROR: The following records are duplicated in .* (re) 'sequence_A' 'sequence_B' 'sequence_C' {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} [2] Test warning on duplicate records. $ ${AUGUR} curate passthru \ > --metadata metadata.tsv \ > --duplicate-reporting warn WARNING: Encountered record with duplicate id 'sequence_A' in .* (re) WARNING: Encountered record with duplicate id 'sequence_B' in .* (re) WARNING: Encountered record with duplicate id 'sequence_C' in .* (re) WARNING: The following records are duplicated in .* (re) 'sequence_A' 'sequence_B' 'sequence_C' {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} Test silent on duplicate records. $ ${AUGUR} curate passthru \ > --metadata metadata.tsv \ > --duplicate-reporting silent {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} Test duplicate records with a bogus id column, which is expected to fail with an error. $ ${AUGUR} curate passthru \ > --metadata metadata.tsv \ > --id-column "bogus_id" ERROR: The provided id column 'bogus_id' does not exist in .* (re) [2] augur-24.2.2/tests/functional/curate/cram/metadata-output.t000066400000000000000000000017361456376326500237700ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Testing metadata output for the curate command. Running the `passthru` subcommand since it does not do any data transformations. Create NDJSON file for testing. $ cat >records.ndjson <<~~ > {"strain": "sequence_A", "country": "USA", "date": "2020-10-01"} > {"strain": "sequence_B", "country": "USA", "date": "2020-10-02"} > {"strain": "sequence_C", "country": "USA", "date": "2020-10-03"} > ~~ Test metadata output TSV $ cat records.ndjson \ > | ${AUGUR} curate passthru \ > --output-metadata metadata.tsv $ cat metadata.tsv strain\tcountry\tdate (esc) sequence_A\tUSA\t2020-10-01 (esc) sequence_B\tUSA\t2020-10-02 (esc) sequence_C\tUSA\t2020-10-03 (esc) Test metadata output TSV to stdout $ cat records.ndjson \ > | ${AUGUR} curate passthru \ > --output-metadata - strain\tcountry\tdate (esc) sequence_A\tUSA\t2020-10-01 (esc) sequence_B\tUSA\t2020-10-02 (esc) sequence_C\tUSA\t2020-10-03 (esc) augur-24.2.2/tests/functional/curate/cram/normalize_strings.t000066400000000000000000000024331456376326500244160ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Test two versions of C-cedilla that look the same visually but have different code points, therefore are considered "Not equal". $ export DIACRITIC_1="Ç" $ export DIACRITIC_2="Ç" $ [[ "${DIACRITIC_1}" == "${DIACRITIC_2}" ]] && echo "Equal" || echo "Not equal" Not equal Create NDJSON file for testing normalize-strings with different forms $ cat >records.ndjson <<~~ > {"record": 1, "diacritic_1": "${DIACRITIC_1}", "diacritic_2": "${DIACRITIC_2}"} > ~~ Test output with default Unicode normalization form "NFC". $ cat records.ndjson \ > | ${AUGUR} curate normalize-strings {"record": 1, "diacritic_1": "\u00c7", "diacritic_2": "\u00c7"} Test output with Unicode normalization form "NFKC". $ cat records.ndjson \ > | ${AUGUR} curate normalize-strings --form NFKC {"record": 1, "diacritic_1": "\u00c7", "diacritic_2": "\u00c7"} Test output with Unicode normalization form "NFD". $ cat records.ndjson \ > | ${AUGUR} curate normalize-strings --form NFD {"record": 1, "diacritic_1": "C\u0327", "diacritic_2": "C\u0327"} Test output with Unicode normalization form "NFKD". $ cat records.ndjson \ > | ${AUGUR} curate normalize-strings --form NFKD {"record": 1, "diacritic_1": "C\u0327", "diacritic_2": "C\u0327"} augur-24.2.2/tests/functional/curate/cram/passthru.t000066400000000000000000000010671456376326500225200ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create NDJSON file for testing all valid JSON data types. $ cat >records.ndjson <<~~ > {"string": "string", "number": 123, "object": {"string": "string"}, "array": ["string0", "string1", "string2"], "boolean1": true, "boolean2": false, "null": null} > ~~ Output should be exactly the same as the input. $ cat records.ndjson | ${AUGUR} curate passthru {"string": "string", "number": 123, "object": {"string": "string"}, "array": ["string0", "string1", "string2"], "boolean1": true, "boolean2": false, "null": null} augur-24.2.2/tests/functional/curate/cram/titlecase.t000066400000000000000000000074511456376326500226270ustar00rootroot00000000000000Setup $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../../../bin/augur}" Test output with articles and a mixture of lower and uppercase letters. $ echo '{"title": "the night OF THE LIVING DEAD"}' \ > | ${AUGUR} curate titlecase --titlecase-fields "title" --articles "a" "and" "of" "the" "le" {"title": "The Night of the Living Dead"} Test output with hyphenated location. $ echo '{"location": "BRAINE-LE-COMTE, FRANCE"}' \ > | ${AUGUR} curate titlecase --titlecase-fields "location" --articles "a" "and" "of" "the" "le" {"location": "Braine-le-Comte, France"} Test output with unicode characters $ echo '{"location": "Auvergne-Rhône-Alpes" }' \ > | ${AUGUR} curate titlecase --titlecase-fields "location" {"location": "Auvergne-Rh\u00f4ne-Alpes"} Test output with abbreviations $ echo '{"city": "Washington DC, USA"}' \ > | ${AUGUR} curate titlecase --titlecase-fields "city" --abbreviations "USA" "DC" {"city": "Washington DC, USA"} Test output with numbers $ echo '{"title": "2021 SARS-CoV"}' \ > | ${AUGUR} curate titlecase --titlecase-fields "title" --abbreviations "SARS" {"title": "2021 SARS-Cov"} Test output with only numbers $ echo '{"int": "2021", "float": "2021.10", "address": "2021.20.30" }' \ > | ${AUGUR} curate titlecase --titlecase-fields "int" "float" "address" {"int": "2021", "float": "2021.10", "address": "2021.20.30"} Test case that passes on empty or null values $ echo '{"empty": "", "null_entry":null }' \ > | ${AUGUR} curate titlecase --titlecase-fields "empty" "null_entry" {"empty": "", "null_entry": null} Test case that fails on a non-string int $ echo '{"bare_int": 2021}' \ > | ${AUGUR} curate titlecase --titlecase-fields "bare_int" ERROR: Failed to titlecase 'bare_int':2021 in record 0 because the value is a 'int' and is not a string. [2] Test case that fails on complex types (e.g. arrays) $ echo '{"an_array": ["hello", "world"]}' \ > | ${AUGUR} curate titlecase --titlecase-fields "an_array" ERROR: Failed to titlecase 'an_array':['hello', 'world'] in record 0 because the value is a 'list' and is not a string. [2] Test cases when fields do not exist, decide if this should error out and may affect ingest pipelines $ echo '{"region":"europe", "country":"france" }' \ > | ${AUGUR} curate titlecase --titlecase-fields "region" "country" "division" "location" "not exist" {"region": "Europe", "country": "France"} Test output with non-string value input with `ERROR_ALL` failure reporting. This reports a collection of all titlecase failures which is especially beneficial for automated pipelines. $ echo '{"bare_int": 2021, "bare_float": 1.2}' \ > | ${AUGUR} curate titlecase --titlecase-fields "bare_int" "bare_float" \ > --failure-reporting "error_all" 1> /dev/null ERROR: Failed to titlecase 'bare_int':2021 in record 0 because the value is a 'int' and is not a string. ERROR: Failed to titlecase 'bare_float':1.2 in record 0 because the value is a 'float' and is not a string. ERROR: Unable to change to titlecase for the following (record, field, field value): (0, 'bare_int', 2021) (0, 'bare_float', 1.2) [2] Test warning on failures such as when encountering a non-string value. $ echo '{"bare_int": 2021}' \ > | ${AUGUR} curate titlecase --titlecase-fields "bare_int" \ > --failure-reporting "warn" WARNING: Failed to titlecase 'bare_int':2021 in record 0 because the value is a 'int' and is not a string. WARNING: Unable to change to titlecase for the following (record, field, field value): (0, 'bare_int', 2021) {"bare_int": 2021} Test silencing on failures such as when encountering a non-string value $ echo '{"bare_int": 2021}' \ > | ${AUGUR} curate titlecase --titlecase-fields "bare_int" \ > --failure-reporting "silent" {"bare_int": 2021} augur-24.2.2/tests/functional/export_v2/000077500000000000000000000000001456376326500202015ustar00rootroot00000000000000augur-24.2.2/tests/functional/export_v2/cram/000077500000000000000000000000001456376326500211235ustar00rootroot00000000000000augur-24.2.2/tests/functional/export_v2/cram/_setup.sh000066400000000000000000000000701456376326500227530ustar00rootroot00000000000000export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" augur-24.2.2/tests/functional/export_v2/cram/augur-version-mismatch.t000066400000000000000000000030221456376326500257160ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Node-data JSONs produced from a different major version of augur are not allowed. $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data2.json" \ > --auspice-config "$TESTDIR/../data/auspice_config3.json" \ > --output dataset.json ERROR: Augur version incompatibility detected: the JSON .*location_node-data2\.json.* was generated by \{'program': 'augur', 'version': '13.1.2'\}, which is incompatible with the current augur version \([.0-9]+\). We suggest you rerun the pipeline using the current version of augur. (re) [2] Skipping validation allows mismatched augur versions to be used without error. (Note the stderr/stdout output is detailed here, including 2 empty lines) $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data2.json" \ > --auspice-config "$TESTDIR/../data/auspice_config2.json" \ > --output dataset.json \ > --skip-validation WARNING: You didn't provide information on who is maintaining this analysis. \s{0} (re) Skipping validation of produced JSON due to --validation-mode=skip or --skip-validation. \s{0} (re) Check the output from the above command against its expected contents $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset2.json" dataset.json \ > --exclude-paths "root['meta']['updated']" {} augur-24.2.2/tests/functional/export_v2/cram/auspice_config1.t000066400000000000000000000020771456376326500243550ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Export with auspice config JSON which defines scale & legend settings $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config1.json" \ > --output dataset.json &>/dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset1.json" dataset.json \ > --exclude-paths "root['meta']['updated']" {} ...same but with repeated --node-data options instead of a single multi-valued option $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" \ > --node-data "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config1.json" \ > --output dataset.json &>/dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset1.json" dataset.json \ > --exclude-paths "root['meta']['updated']" {} augur-24.2.2/tests/functional/export_v2/cram/auspice_config2.t000066400000000000000000000010241456376326500243450ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Export with auspice config JSON with an extensions block $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config2.json" \ > --output dataset.json &>/dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset2.json" dataset.json \ > --exclude-paths "root['meta']['updated']" {} augur-24.2.2/tests/functional/export_v2/cram/auspice_config3.t000066400000000000000000000021341456376326500243510ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh # auspice_config3.json is the same as auspice_config2.json but with an extra key which the schema does not allow. # Running without --skip-validation should result in an error # Message printed: "Validation of "$TESTDIR/../data/auspice_config3.json" failed." $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config3.json" \ > --output dataset.json &>/dev/null [2] # Skipping validation gives us the same results as `auspice_config2.json` $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config3.json" \ > --output dataset.json \ > --skip-validation &>/dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset2.json" dataset.json \ > --exclude-paths "root['meta']['updated']" {} augur-24.2.2/tests/functional/export_v2/cram/auspice_config4.t000066400000000000000000000012751456376326500243570ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Run export with metadata and external colors TSV that contains zero values. $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config4.json" \ > --metadata "$TESTDIR/../data/zero_value_metadata.tsv" \ > --colors "$TESTDIR/../data/zero_value_colors.tsv" \ > --output dataset.json &> /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset3.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} augur-24.2.2/tests/functional/export_v2/cram/branch_attrs.t000066400000000000000000000013711456376326500237640ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Test that attributes are correctly exported as branch_attrs. Currently this includes branch labels (node_data→branches), mutations (node_data→nodes) and a historical node_data→nodes→→clade_annotation branch label. $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/nt_muts_1.json" "$TESTDIR/../data/aa_muts_1.json" "$TESTDIR/../data/branch-labels.json" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset-with-branch-labels.json" dataset.json \ > --exclude-paths "root['meta']['updated']" {} augur-24.2.2/tests/functional/export_v2/cram/metadata-columns.t000066400000000000000000000102521456376326500245460ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create files for testing. $ cat >metadata.tsv <<~~ > strain field_A field_B > tipA AA AAA > tipB BB BBB > tipC CC CCC > tipD DD DDD > tipE EE EEE > tipF FF FFF > ~~ $ cat >tree.nwk <<~~ > (tipA:1,(tipB:1,tipC:1)internalBC:2,(tipD:3,tipE:4,tipF:1)internalDEF:5)ROOT:0; > ~~ $ cat >auspice-config.json <<~~ > {"metadata_columns": ["field_A", "field_B"]} > ~~ $ cat >auspice-config-overridden.json <<~~ > {"metadata_columns": ["overridden_field"]} > ~~ Run export with tree and metadata with additional columns. $ ${AUGUR} export v2 \ > --tree tree.nwk \ > --metadata metadata.tsv \ > --metadata-columns "field_A" "field_B" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset-with-additional-metadata-columns.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} Missing columns are skipped with a warning. $ ${AUGUR} export v2 \ > --tree tree.nwk \ > --metadata metadata.tsv \ > --metadata-columns "field_A" "field_B" "missing_field" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null WARNING: Requested metadata column 'missing_field' does not exist and will not be exported \s{0} (re) $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset-with-additional-metadata-columns.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} Specifying a fields with both --metadata-columns and --colory-by-metadata should result in field used as a coloring and a filter. $ ${AUGUR} export v2 \ > --tree tree.nwk \ > --metadata metadata.tsv \ > --metadata-columns "field_A" "field_B" \ > --color-by-metadata "field_B" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset-with-additional-metadata-columns.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {'iterable_item_added': {"root['meta']['colorings'][0]": {'key': 'field_B', 'title': 'field_B', 'type': 'categorical'}, "root['meta']['filters'][0]": 'field_B'}} Missing columns are skipped with a warning when specified by both --metadata-columns and --color-by-metadata. $ ${AUGUR} export v2 \ > --tree tree.nwk \ > --metadata metadata.tsv \ > --metadata-columns "field_A" "field_B" "missing_field" \ > --color-by-metadata "missing_field" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null WARNING: Requested metadata column 'missing_field' does not exist and will not be exported \s{0} (re) WARNING: Requested color-by field 'missing_field' does not exist and will not be used as a coloring or exported. \s{0} (re) $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset-with-additional-metadata-columns.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} Specifying additional metadata columns via the Auspice configuration file. $ ${AUGUR} export v2 \ > --tree tree.nwk \ > --metadata metadata.tsv \ > --auspice-config auspice-config.json \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset-with-additional-metadata-columns.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} Specifying additional metadata columns via command line overrides the Auspice configuration file. $ ${AUGUR} export v2 \ > --tree tree.nwk \ > --metadata metadata.tsv \ > --auspice-config auspice-config-overridden.json \ > --metadata-columns "field_A" "field_B" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset-with-additional-metadata-columns.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} augur-24.2.2/tests/functional/export_v2/cram/metadata-id-columns.t000066400000000000000000000040311456376326500251360ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Run export with metadata using the default id column of "strain". $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --metadata "$TESTDIR/../data/dataset1_metadata_with_strain.tsv" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config1.json" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset1.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} Run export with metadata that uses a different id column other than "strain". In this case, the column is "name" (one of the default columns expected by Augur's `io.read_metadata` function). $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --metadata "$TESTDIR/../data/dataset1_metadata_with_name.tsv" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config1.json" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset1.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} Run export with metadata that uses an invalid id column. This should fail with a helpful error message. $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --metadata "$TESTDIR/../data/dataset1_metadata_without_valid_id.tsv" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config1.json" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null ERROR: None of the possible id columns (('strain', 'name')) were found in the metadata's columns ('invalid_id', 'div', 'mutation_length') [1] augur-24.2.2/tests/functional/export_v2/cram/metadata-with-accession.t000066400000000000000000000026761456376326500260210ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Run export with metadata that contains "accession". $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --metadata "$TESTDIR/../data/dataset1_metadata_with_strain_and_accession.tsv" \ > --node-data "$TESTDIR/../data/div_node-data.json" "$TESTDIR/../data/location_node-data.json" \ > --auspice-config "$TESTDIR/../data/auspice_config1.json" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset-with-accession.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} Run export with metadata that contains "accession", and use "accession" as the ID column. $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree-by-accession.nwk" \ > --metadata "$TESTDIR/../data/dataset1_metadata_with_strain_and_accession.tsv" \ > --metadata-id-columns accession \ > --node-data "$TESTDIR/../data/div_node-data-by-accession.json" "$TESTDIR/../data/location_node-data-by-accession.json" \ > --auspice-config "$TESTDIR/../data/auspice_config1.json" \ > --maintainers "Nextstrain Team" \ > --output dataset.json > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/dataset-with-accession-by-accession.json" dataset.json \ > --exclude-paths "root['meta']['updated']" "root['meta']['maintainers']" {} augur-24.2.2/tests/functional/export_v2/cram/minify-output.t000066400000000000000000000037671456376326500241560ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Define a function to generate a Newick tree of a given size. Use lengthy node names to create larger file sizes with less recursion. $ generate_newick() { > local n=$1 > local prefix=$(printf 'N%.0s' {1..1000}}) > if [ $n -eq 1 ]; then > echo "$prefix$n" > else > echo "($(generate_newick $((n-1))),$prefix$n)" > fi > } A small tree is not automatically minified. The unminified output is 13KB which is considered acceptable. $ echo "$(generate_newick 10);" > small_tree.nwk $ ${AUGUR} export v2 \ > --tree small_tree.nwk \ > --skip-validation \ > --output output.json &>/dev/null $ head -c 20 output.json { "version": "v2", (no-eol) $ ls -l output.json | awk '{print $5}' 13813 It can be forcefully minified with an argument. $ ${AUGUR} export v2 \ > --tree small_tree.nwk \ > --skip-validation \ > --minify-json \ > --output output.json &>/dev/null $ head -c 20 output.json {"version": "v2", "m (no-eol) It can also be forcefully minified by setting AUGUR_MINIFY_JSON to any value, even if it may seem "falsey". $ AUGUR_MINIFY_JSON=0 ${AUGUR} export v2 \ > --tree small_tree.nwk \ > --skip-validation \ > --output output.json &>/dev/null $ head -c 20 output.json {"version": "v2", "m (no-eol) A large tree, when forcefully not minified, has an output size of 6MB which is considered large. $ echo "$(generate_newick 500);" > big_tree.nwk $ ${AUGUR} export v2 \ > --tree big_tree.nwk \ > --skip-validation \ > --no-minify-json \ > --output output.json &>/dev/null $ head -c 20 output.json { "version": "v2", (no-eol) $ ls -l output.json | awk '{print $5}' 6568454 This means it is automatically minified. $ ${AUGUR} export v2 \ > --tree big_tree.nwk \ > --skip-validation \ > --output output.json &>/dev/null $ head -c 20 output.json {"version": "v2", "m (no-eol) $ ls -l output.json | awk '{print $5}' 561436 augur-24.2.2/tests/functional/export_v2/cram/minimal.t000066400000000000000000000035321456376326500227410ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Minimal export -- single input (tree) and single output (dataset JSON) $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --output minimal.json WARNING: You didn't provide information on who is maintaining this analysis. Validating produced JSON Validating schema of 'minimal.json'... Validating that the JSON is internally consistent... Validation of 'minimal.json' succeeded. The above minimal.json takes divergence from the newick file. This converts newick divergences of (e.g.) '1' to `1.0` because BioPython uses floats (which is perfectly reasonable). Ignore this type change in the JSON diff. (Note that Auspice won't behave any differently) $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" --ignore-numeric-type-changes "$TESTDIR/../data/minimal.json" minimal.json \ > --exclude-paths "root['meta']['updated']" {} Almost minimal export -- divergence is encoded via the node-data JSON typically produced by `augur refine` $ ${AUGUR} export v2 \ > --tree "$TESTDIR/../data/tree.nwk" \ > --node-data "$TESTDIR/../data/div_node-data.json" \ > --output almost-minimal.json WARNING: You didn't provide information on who is maintaining this analysis. Validating produced JSON Validating schema of 'almost-minimal.json'... Validating that the JSON is internally consistent... Validation of 'almost-minimal.json' succeeded. $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" "$TESTDIR/../data/minimal.json" almost-minimal.json \ > --exclude-paths "root['meta']['updated']" {} Future test: Run augur export _without_ any node-data JSONs when this can read divergence values from the newick file and compare this to the tree using `div_node-data.json` - they should be identical. See https://github.com/nextstrain/augur/issues/273 for more augur-24.2.2/tests/functional/export_v2/data/000077500000000000000000000000001456376326500211125ustar00rootroot00000000000000augur-24.2.2/tests/functional/export_v2/data/aa_muts_1.json000066400000000000000000000007501456376326500236600ustar00rootroot00000000000000{ "annotations": { "gene1": { "end": 150, "start": 50, "strand": "+" }, "gene2": { "end": 300, "start": 200, "strand": "+" }, "nuc": { "end": 500, "start": 1, "strand": "+" } }, "nodes": { "internalBC": { "aa_muts": { "gene1": ["S10G", "P20S"], "gene2": [] } }, "internalDEF": { "aa_muts": { "gene1": ["P20S"], "gene2": [] } } } }augur-24.2.2/tests/functional/export_v2/data/auspice_config1.json000066400000000000000000000013011456376326500250370ustar00rootroot00000000000000{ "colorings": [ { "key": "location", "title": "Location", "type": "categorical", "legend": [ {"value": "alpha", "display": "α"}, {"value": "beta"} ], "scale": [ ["beta", "#bd0026"], ["gamma", "#6a51a3"] ] }, { "key": "mutation_length", "title": "Mutations per branch", "type": "continuous", "legend": [ {"value": 1, "display": "0-2", "bounds": [-1,2]}, {"value": 3, "display": "3-5", "bounds": [2,5]}, {"value": 5, "display": ">5", "bounds": [5, 10]} ], "scale": [ [1, "#081d58"], [3, "#1d91c0"], [5, "#c7e9b4"] ] } ] }augur-24.2.2/tests/functional/export_v2/data/auspice_config2.json000066400000000000000000000014531456376326500250500ustar00rootroot00000000000000{ "title": "Minimal config with an extensions block", "colorings": [ { "key": "location", "title": "Location", "type": "categorical", "legend": [ {"value": "alpha", "display": "α"}, {"value": "beta"} ], "scale": [ ["beta", "#bd0026"], ["gamma", "#6a51a3"] ] }, { "key": "mutation_length", "title": "Mutations per branch", "type": "continuous", "legend": [ {"value": 1, "display": "0-2", "bounds": [-1,2]}, {"value": 3, "display": "3-5", "bounds": [2,5]}, {"value": 5, "display": ">5", "bounds": [5, 10]} ], "scale": [ [1, "#081d58"], [3, "#1d91c0"], [5, "#c7e9b4"] ] } ], "extensions": { "some_key": "some_value" } }augur-24.2.2/tests/functional/export_v2/data/auspice_config3.json000066400000000000000000000015731456376326500250540ustar00rootroot00000000000000{ "title": "Minimal config with an extensions block", "colorings": [ { "key": "location", "title": "Location", "type": "categorical", "legend": [ {"value": "alpha", "display": "α"}, {"value": "beta"} ], "scale": [ ["beta", "#bd0026"], ["gamma", "#6a51a3"] ] }, { "key": "mutation_length", "title": "Mutations per branch", "type": "continuous", "legend": [ {"value": 1, "display": "0-2", "bounds": [-1,2]}, {"value": 3, "display": "3-5", "bounds": [2,5]}, {"value": 5, "display": ">5", "bounds": [5, 10]} ], "scale": [ [1, "#081d58"], [3, "#1d91c0"], [5, "#c7e9b4"] ] } ], "extensions": { "some_key": "some_value" }, "this_is_not_allowed_by_the_schema": "but is used to test --skip-validation" }augur-24.2.2/tests/functional/export_v2/data/auspice_config4.json000066400000000000000000000015421456376326500250510ustar00rootroot00000000000000{ "colorings": [ { "key": "location", "title": "Location", "type": "categorical", "legend": [ {"value": "alpha", "display": "α"}, {"value": "beta"} ], "scale": [ ["beta", "#bd0026"], ["gamma", "#6a51a3"] ] }, { "key": "mutation_length", "title": "Mutations per branch", "type": "continuous", "legend": [ {"value": 1, "display": "0-2", "bounds": [-1,2]}, {"value": 3, "display": "3-5", "bounds": [2,5]}, {"value": 5, "display": ">5", "bounds": [5, 10]} ], "scale": [ [1, "#081d58"], [3, "#1d91c0"], [5, "#c7e9b4"] ] }, { "key": "zero_value", "title": "Zero", "type": "ordinal" } ], "filters": [ "location", "zero_value" ] } augur-24.2.2/tests/functional/export_v2/data/branch-labels.json000066400000000000000000000013141456376326500245010ustar00rootroot00000000000000{ "nodes": { "tipD": { "clade_membership": "membership D", "clade_annotation": "set via nodes→clade_annotation" }, "tipC": { "clade_membership": "membership C", "clade_annotation": "this should be overwritten by custom clade label" } }, "branches": { "ROOT": { "labels": { "fruit": "apple" } }, "tipA": { "labels": { "fruit": "orange" } }, "tipC": { "labels": { "clade": "clade C", "none": "this will not be exported" } }, "internalBC": { "labels": { "fruit": "pomegranate", "vegetable": "pumpkin", "aa": "custom aa label" } } } }augur-24.2.2/tests/functional/export_v2/data/dataset-with-accession-by-accession.json000066400000000000000000000102551456376326500307300ustar00rootroot00000000000000{ "version": "v2", "meta": { "updated": "2023-07-24", "maintainers": [ { "name": "Nextstrain Team" } ], "colorings": [ { "key": "location", "title": "Location", "type": "categorical", "scale": [ [ "beta", "#bd0026" ], [ "gamma", "#6a51a3" ] ], "legend": [ { "value": "alpha", "display": "\u03b1" }, { "value": "beta" } ] }, { "key": "mutation_length", "title": "Mutations per branch", "type": "continuous", "scale": [ [ 1, "#081d58" ], [ 3, "#1d91c0" ], [ 5, "#c7e9b4" ] ], "legend": [ { "value": 1, "display": "0-2", "bounds": [ -1, 2 ] }, { "value": 3, "display": "3-5", "bounds": [ 2, 5 ] }, { "value": 5, "display": ">5", "bounds": [ 5, 10 ] } ] } ], "filters": [ "location" ], "panels": [ "tree" ] }, "tree": { "name": "ROOT", "node_attrs": { "div": 0, "mutation_length": { "value": 0 } }, "branch_attrs": {}, "children": [ { "name": "accessionA", "node_attrs": { "div": 1, "accession": "accessionA", "location": { "value": "delta" }, "mutation_length": { "value": 1 } }, "branch_attrs": {} }, { "name": "internalBC", "node_attrs": { "div": 2, "mutation_length": { "value": 2 } }, "branch_attrs": {}, "children": [ { "name": "accessionB", "node_attrs": { "div": 3, "accession": "accessionB", "location": { "value": "gamma" }, "mutation_length": { "value": 1 } }, "branch_attrs": {} }, { "name": "accessionC", "node_attrs": { "div": 3, "accession": "accessionC", "location": { "value": "gamma" }, "mutation_length": { "value": 1 } }, "branch_attrs": {} } ] }, { "name": "internalDEF", "node_attrs": { "div": 5, "location": { "value": "alpha" }, "mutation_length": { "value": 5 } }, "branch_attrs": {}, "children": [ { "name": "accessionD", "node_attrs": { "div": 8, "accession": "accessionD", "location": { "value": "alpha" }, "mutation_length": { "value": 3 } }, "branch_attrs": {} }, { "name": "accessionE", "node_attrs": { "div": 9, "accession": "accessionE", "location": { "value": "alpha" }, "mutation_length": { "value": 4 } }, "branch_attrs": {} }, { "name": "accessionF", "node_attrs": { "div": 6, "accession": "accessionF", "location": { "value": "beta" }, "mutation_length": { "value": 1 } }, "branch_attrs": {} } ] } ] } }augur-24.2.2/tests/functional/export_v2/data/dataset-with-accession.json000066400000000000000000000102111456376326500263430ustar00rootroot00000000000000{ "version": "v2", "meta": { "updated": "2023-07-24", "maintainers": [ { "name": "Nextstrain Team" } ], "colorings": [ { "key": "location", "title": "Location", "type": "categorical", "scale": [ [ "beta", "#bd0026" ], [ "gamma", "#6a51a3" ] ], "legend": [ { "value": "alpha", "display": "\u03b1" }, { "value": "beta" } ] }, { "key": "mutation_length", "title": "Mutations per branch", "type": "continuous", "scale": [ [ 1, "#081d58" ], [ 3, "#1d91c0" ], [ 5, "#c7e9b4" ] ], "legend": [ { "value": 1, "display": "0-2", "bounds": [ -1, 2 ] }, { "value": 3, "display": "3-5", "bounds": [ 2, 5 ] }, { "value": 5, "display": ">5", "bounds": [ 5, 10 ] } ] } ], "filters": [ "location" ], "panels": [ "tree" ] }, "tree": { "name": "ROOT", "node_attrs": { "div": 0, "mutation_length": { "value": 0 } }, "branch_attrs": {}, "children": [ { "name": "tipA", "node_attrs": { "div": 1, "accession": "accessionA", "location": { "value": "delta" }, "mutation_length": { "value": 1 } }, "branch_attrs": {} }, { "name": "internalBC", "node_attrs": { "div": 2, "mutation_length": { "value": 2 } }, "branch_attrs": {}, "children": [ { "name": "tipB", "node_attrs": { "div": 3, "accession": "accessionB", "location": { "value": "gamma" }, "mutation_length": { "value": 1 } }, "branch_attrs": {} }, { "name": "tipC", "node_attrs": { "div": 3, "accession": "accessionC", "location": { "value": "gamma" }, "mutation_length": { "value": 1 } }, "branch_attrs": {} } ] }, { "name": "internalDEF", "node_attrs": { "div": 5, "location": { "value": "alpha" }, "mutation_length": { "value": 5 } }, "branch_attrs": {}, "children": [ { "name": "tipD", "node_attrs": { "div": 8, "accession": "accessionD", "location": { "value": "alpha" }, "mutation_length": { "value": 3 } }, "branch_attrs": {} }, { "name": "tipE", "node_attrs": { "div": 9, "accession": "accessionE", "location": { "value": "alpha" }, "mutation_length": { "value": 4 } }, "branch_attrs": {} }, { "name": "tipF", "node_attrs": { "div": 6, "accession": "accessionF", "location": { "value": "beta" }, "mutation_length": { "value": 1 } }, "branch_attrs": {} } ] } ] } }augur-24.2.2/tests/functional/export_v2/data/dataset-with-additional-metadata-columns.json000066400000000000000000000045711456376326500317540ustar00rootroot00000000000000{ "version": "v2", "meta": { "updated": "2024-01-05", "maintainers": [ { "name": "Nextstrain Team" } ], "colorings": [], "filters": [], "panels": [ "tree" ] }, "tree": { "name": "ROOT", "node_attrs": { "div": 0 }, "branch_attrs": {}, "children": [ { "name": "tipA", "node_attrs": { "div": 1.0, "field_A": { "value": "AA" }, "field_B": { "value": "AAA" } }, "branch_attrs": {} }, { "name": "internalBC", "node_attrs": { "div": 2.0 }, "branch_attrs": {}, "children": [ { "name": "tipB", "node_attrs": { "div": 3.0, "field_A": { "value": "BB" }, "field_B": { "value": "BBB" } }, "branch_attrs": {} }, { "name": "tipC", "node_attrs": { "div": 3.0, "field_A": { "value": "CC" }, "field_B": { "value": "CCC" } }, "branch_attrs": {} } ] }, { "name": "internalDEF", "node_attrs": { "div": 5.0 }, "branch_attrs": {}, "children": [ { "name": "tipD", "node_attrs": { "div": 8.0, "field_A": { "value": "DD" }, "field_B": { "value": "DDD" } }, "branch_attrs": {} }, { "name": "tipE", "node_attrs": { "div": 9.0, "field_A": { "value": "EE" }, "field_B": { "value": "EEE" } }, "branch_attrs": {} }, { "name": "tipF", "node_attrs": { "div": 6.0, "field_A": { "value": "FF" }, "field_B": { "value": "FFF" } }, "branch_attrs": {} } ] } ] } }augur-24.2.2/tests/functional/export_v2/data/dataset-with-branch-labels.json000066400000000000000000000060531456376326500271020ustar00rootroot00000000000000{ "version": "v2", "meta": { "maintainers": [ { "name": "Nextstrain Team" } ], "genome_annotations": { "nuc": { "end": 500, "start": 1, "strand": "+" }, "gene1": { "end": 150, "start": 50, "strand": "+" }, "gene2": { "end": 300, "start": 200, "strand": "+" } }, "colorings": [ { "key": "clade_membership", "title": "Clade", "type": "categorical" }, { "key": "gt", "title": "Genotype", "type": "categorical" } ], "filters": [ "clade_membership" ], "panels": [ "tree", "entropy" ], "updated": "2022-09-09" }, "tree": { "name": "ROOT", "node_attrs": { "div": 0 }, "branch_attrs": { "labels": { "fruit": "apple" } }, "children": [ { "name": "tipA", "branch_attrs": { "labels": { "fruit": "orange" } }, "node_attrs": { "div": 1 } }, { "name": "internalBC", "node_attrs": { "div": 2 }, "branch_attrs": { "mutations": { "gene1": [ "S10G", "P20S" ] }, "labels": { "aa": "custom aa label", "fruit": "pomegranate", "vegetable": "pumpkin" } }, "children": [ { "name": "tipB", "node_attrs": { "div": 3 }, "branch_attrs": {} }, { "name": "tipC", "node_attrs": { "div": 3, "clade_membership": { "value": "membership C" } }, "branch_attrs": { "labels": { "clade": "clade C" } } } ] }, { "name": "internalDEF", "node_attrs": { "div": 5 }, "branch_attrs": { "mutations": { "nuc": [ "A400T" ], "gene1": [ "P20S" ] }, "labels": { "aa": "gene1: P20S" } }, "children": [ { "name": "tipD", "node_attrs": { "div": 8, "clade_membership": { "value": "membership D" } }, "branch_attrs": { "labels": { "clade": "set via nodes\u2192clade_annotation" } } }, { "name": "tipE", "node_attrs": { "div": 9 }, "branch_attrs": {} }, { "name": "tipF", "node_attrs": { "div": 6 }, "branch_attrs": {} } ] } ] } }augur-24.2.2/tests/functional/export_v2/data/dataset1.json000066400000000000000000000075111456376326500235170ustar00rootroot00000000000000{ "meta": { "colorings": [ { "key": "location", "legend": [ { "display": "\u03b1", "value": "alpha" }, { "value": "beta" } ], "scale": [ [ "beta", "#bd0026" ], [ "gamma", "#6a51a3" ] ], "title": "Location", "type": "categorical" }, { "key": "mutation_length", "legend": [ { "bounds": [ -1, 2 ], "display": "0-2", "value": 1 }, { "bounds": [ 2, 5 ], "display": "3-5", "value": 3 }, { "bounds": [ 5, 10 ], "display": ">5", "value": 5 } ], "scale": [ [ 1, "#081d58" ], [ 3, "#1d91c0" ], [ 5, "#c7e9b4" ] ], "title": "Mutations per branch", "type": "continuous" } ], "filters": [ "location" ], "panels": [ "tree" ], "updated": "2021-06-09" }, "tree": { "branch_attrs": {}, "children": [ { "branch_attrs": {}, "name": "tipA", "node_attrs": { "div": 1, "location": { "value": "delta" }, "mutation_length": { "value": 1 } } }, { "branch_attrs": {}, "children": [ { "branch_attrs": {}, "name": "tipB", "node_attrs": { "div": 3, "location": { "value": "gamma" }, "mutation_length": { "value": 1 } } }, { "branch_attrs": {}, "name": "tipC", "node_attrs": { "div": 3, "location": { "value": "gamma" }, "mutation_length": { "value": 1 } } } ], "name": "internalBC", "node_attrs": { "div": 2, "mutation_length": { "value": 2 } } }, { "branch_attrs": {}, "children": [ { "branch_attrs": {}, "name": "tipD", "node_attrs": { "div": 8, "location": { "value": "alpha" }, "mutation_length": { "value": 3 } } }, { "branch_attrs": {}, "name": "tipE", "node_attrs": { "div": 9, "location": { "value": "alpha" }, "mutation_length": { "value": 4 } } }, { "branch_attrs": {}, "name": "tipF", "node_attrs": { "div": 6, "location": { "value": "beta" }, "mutation_length": { "value": 1 } } } ], "name": "internalDEF", "node_attrs": { "div": 5, "location": { "value": "alpha" }, "mutation_length": { "value": 5 } } } ], "name": "ROOT", "node_attrs": { "div": 0, "mutation_length": { "value": 0 } } }, "version": "v2" }augur-24.2.2/tests/functional/export_v2/data/dataset1_metadata_with_name.tsv000066400000000000000000000001171456376326500272500ustar00rootroot00000000000000name div mutation_length tipA 1 1 tipB 3 1 tipC 3 1 tipD 8 3 tipE 9 4 tipF 6 1 augur-24.2.2/tests/functional/export_v2/data/dataset1_metadata_with_strain.tsv000066400000000000000000000001211456376326500276230ustar00rootroot00000000000000strain div mutation_length tipA 1 1 tipB 3 1 tipC 3 1 tipD 8 3 tipE 9 4 tipF 6 1 augur-24.2.2/tests/functional/export_v2/data/dataset1_metadata_with_strain_and_accession.tsv000066400000000000000000000002351456376326500325020ustar00rootroot00000000000000strain accession div mutation_length tipA accessionA 1 1 tipB accessionB 3 1 tipC accessionC 3 1 tipD accessionD 8 3 tipE accessionE 9 4 tipF accessionF 6 1 augur-24.2.2/tests/functional/export_v2/data/dataset1_metadata_without_valid_id.tsv000066400000000000000000000001251456376326500306320ustar00rootroot00000000000000invalid_id div mutation_length tipA 1 1 tipB 3 1 tipC 3 1 tipD 8 3 tipE 9 4 tipF 6 1 augur-24.2.2/tests/functional/export_v2/data/dataset2.json000066400000000000000000000076741456376326500235320ustar00rootroot00000000000000{ "meta": { "colorings": [ { "key": "location", "legend": [ { "display": "\u03b1", "value": "alpha" }, { "value": "beta" } ], "scale": [ [ "beta", "#bd0026" ], [ "gamma", "#6a51a3" ] ], "title": "Location", "type": "categorical" }, { "key": "mutation_length", "legend": [ { "bounds": [ -1, 2 ], "display": "0-2", "value": 1 }, { "bounds": [ 2, 5 ], "display": "3-5", "value": 3 }, { "bounds": [ 5, 10 ], "display": ">5", "value": 5 } ], "scale": [ [ 1, "#081d58" ], [ 3, "#1d91c0" ], [ 5, "#c7e9b4" ] ], "title": "Mutations per branch", "type": "continuous" } ], "filters": [ "location" ], "panels": [ "tree" ], "extensions": { "some_key": "some_value" }, "title": "Minimal config with an extensions block", "updated": "2021-06-09" }, "tree": { "branch_attrs": {}, "children": [ { "branch_attrs": {}, "name": "tipA", "node_attrs": { "div": 1, "location": { "value": "delta" }, "mutation_length": { "value": 1 } } }, { "branch_attrs": {}, "children": [ { "branch_attrs": {}, "name": "tipB", "node_attrs": { "div": 3, "location": { "value": "gamma" }, "mutation_length": { "value": 1 } } }, { "branch_attrs": {}, "name": "tipC", "node_attrs": { "div": 3, "location": { "value": "gamma" }, "mutation_length": { "value": 1 } } } ], "name": "internalBC", "node_attrs": { "div": 2, "mutation_length": { "value": 2 } } }, { "branch_attrs": {}, "children": [ { "branch_attrs": {}, "name": "tipD", "node_attrs": { "div": 8, "location": { "value": "alpha" }, "mutation_length": { "value": 3 } } }, { "branch_attrs": {}, "name": "tipE", "node_attrs": { "div": 9, "location": { "value": "alpha" }, "mutation_length": { "value": 4 } } }, { "branch_attrs": {}, "name": "tipF", "node_attrs": { "div": 6, "location": { "value": "beta" }, "mutation_length": { "value": 1 } } } ], "name": "internalDEF", "node_attrs": { "div": 5, "location": { "value": "alpha" }, "mutation_length": { "value": 5 } } } ], "name": "ROOT", "node_attrs": { "div": 0, "mutation_length": { "value": 0 } } }, "version": "v2" } augur-24.2.2/tests/functional/export_v2/data/dataset3.json000066400000000000000000000103541456376326500235200ustar00rootroot00000000000000{ "version": "v2", "meta": { "updated": "2022-11-16", "colorings": [ { "key": "location", "title": "Location", "type": "categorical", "scale": [ [ "beta", "#bd0026" ], [ "gamma", "#6a51a3" ] ], "legend": [ { "value": "alpha", "display": "\u03b1" }, { "value": "beta" } ] }, { "key": "mutation_length", "title": "Mutations per branch", "type": "continuous", "scale": [ [ 1, "#081d58" ], [ 3, "#1d91c0" ], [ 5, "#c7e9b4" ] ], "legend": [ { "value": 1, "display": "0-2", "bounds": [ -1, 2 ] }, { "value": 3, "display": "3-5", "bounds": [ 2, 5 ] }, { "value": 5, "display": ">5", "bounds": [ 5, 10 ] } ] }, { "key": "zero_value", "title": "Zero", "type": "ordinal", "scale": [ [ 0, "#4042C7" ] ] } ], "filters": [ "location", "zero_value" ], "panels": [ "tree" ] }, "tree": { "name": "ROOT", "node_attrs": { "div": 0, "mutation_length": { "value": 0 } }, "branch_attrs": {}, "children": [ { "name": "tipA", "node_attrs": { "div": 1, "mutation_length": { "value": 1 }, "location": { "value": "delta" }, "zero_value": { "value": 0 } }, "branch_attrs": {} }, { "name": "internalBC", "node_attrs": { "div": 2, "mutation_length": { "value": 2 } }, "branch_attrs": {}, "children": [ { "name": "tipB", "node_attrs": { "div": 3, "mutation_length": { "value": 1 }, "location": { "value": "gamma" }, "zero_value": { "value": 0 } }, "branch_attrs": {} }, { "name": "tipC", "node_attrs": { "div": 3, "mutation_length": { "value": 1 }, "location": { "value": "gamma" }, "zero_value": { "value": 0 } }, "branch_attrs": {} } ] }, { "name": "internalDEF", "node_attrs": { "div": 5, "mutation_length": { "value": 5 }, "location": { "value": "alpha" } }, "branch_attrs": {}, "children": [ { "name": "tipD", "node_attrs": { "div": 8, "mutation_length": { "value": 3 }, "location": { "value": "alpha" } }, "branch_attrs": {} }, { "name": "tipE", "node_attrs": { "div": 9, "mutation_length": { "value": 4 }, "location": { "value": "alpha" } }, "branch_attrs": {} }, { "name": "tipF", "node_attrs": { "div": 6, "mutation_length": { "value": 1 }, "location": { "value": "beta" } }, "branch_attrs": {} } ] } ] } } augur-24.2.2/tests/functional/export_v2/data/div_node-data-by-accession.json000066400000000000000000000007651456376326500270700ustar00rootroot00000000000000{ "nodes": { "ROOT": { "mutation_length": 0 }, "accessionA": { "mutation_length": 1 }, "internalBC": { "mutation_length": 2 }, "accessionB": { "mutation_length": 1 }, "accessionC": { "mutation_length": 1 }, "internalDEF": { "mutation_length": 5 }, "accessionD": { "mutation_length": 3 }, "accessionE": { "mutation_length": 4 }, "accessionF": { "mutation_length": 1 } } } augur-24.2.2/tests/functional/export_v2/data/div_node-data.json000066400000000000000000000007211456376326500245030ustar00rootroot00000000000000{ "nodes": { "ROOT": { "mutation_length": 0 }, "tipA": { "mutation_length": 1 }, "internalBC": { "mutation_length": 2 }, "tipB": { "mutation_length": 1 }, "tipC": { "mutation_length": 1 }, "internalDEF": { "mutation_length": 5 }, "tipD": { "mutation_length": 3 }, "tipE": { "mutation_length": 4 }, "tipF": { "mutation_length": 1 } } } augur-24.2.2/tests/functional/export_v2/data/location_node-data-by-accession.json000066400000000000000000000006071456376326500301110ustar00rootroot00000000000000{ "nodes": { "accessionA": { "location": "delta" }, "accessionB": { "location": "gamma" }, "accessionC": { "location": "gamma" }, "internalDEF": { "location": "alpha" }, "accessionD": { "location": "alpha" }, "accessionE": { "location": "alpha" }, "accessionF": { "location": "beta" } } } augur-24.2.2/tests/functional/export_v2/data/location_node-data.json000066400000000000000000000005431456376326500255330ustar00rootroot00000000000000{ "nodes": { "tipA": { "location": "delta" }, "tipB": { "location": "gamma" }, "tipC": { "location": "gamma" }, "internalDEF": { "location": "alpha" }, "tipD": { "location": "alpha" }, "tipE": { "location": "alpha" }, "tipF": { "location": "beta" } } } augur-24.2.2/tests/functional/export_v2/data/location_node-data2.json000066400000000000000000000006551456376326500256210ustar00rootroot00000000000000{ "generated_by": { "program": "augur", "version": "13.1.2" }, "nodes": { "tipA": { "location": "delta" }, "tipB": { "location": "gamma" }, "tipC": { "location": "gamma" }, "internalDEF": { "location": "alpha" }, "tipD": { "location": "alpha" }, "tipE": { "location": "alpha" }, "tipF": { "location": "beta" } } } augur-24.2.2/tests/functional/export_v2/data/minimal.json000066400000000000000000000026651456376326500234440ustar00rootroot00000000000000{ "meta": { "colorings": [], "filters": [], "panels": [ "tree" ], "updated": "2021-06-09" }, "tree": { "branch_attrs": {}, "children": [ { "branch_attrs": {}, "name": "tipA", "node_attrs": { "div": 1 } }, { "branch_attrs": {}, "children": [ { "branch_attrs": {}, "name": "tipB", "node_attrs": { "div": 3 } }, { "branch_attrs": {}, "name": "tipC", "node_attrs": { "div": 3 } } ], "name": "internalBC", "node_attrs": { "div": 2 } }, { "branch_attrs": {}, "children": [ { "branch_attrs": {}, "name": "tipD", "node_attrs": { "div": 8 } }, { "branch_attrs": {}, "name": "tipE", "node_attrs": { "div": 9 } }, { "branch_attrs": {}, "name": "tipF", "node_attrs": { "div": 6 } } ], "name": "internalDEF", "node_attrs": { "div": 5 } } ], "name": "ROOT", "node_attrs": { "div": 0 } }, "version": "v2" }augur-24.2.2/tests/functional/export_v2/data/nt_muts_1.json000066400000000000000000000003771456376326500237250ustar00rootroot00000000000000{ "annotations": { "nuc": { "end": 500, "start": 1, "strand": "+" } }, "nodes": { "internalDEF": { "muts": [ "A400T" ] }, "not_in_tree": { "muts": [ "A100T" ] } } } augur-24.2.2/tests/functional/export_v2/data/tree-by-accession.nwk000066400000000000000000000001641456376326500251500ustar00rootroot00000000000000(accessionA:1,(accessionB:1,accessionC:1)internalBC:2,(accessionD:3,accessionE:4,accessionF:1)internalDEF:5)ROOT:0; augur-24.2.2/tests/functional/export_v2/data/tree.nwk000066400000000000000000000001201456376326500225630ustar00rootroot00000000000000(tipA:1,(tipB:1,tipC:1)internalBC:2,(tipD:3,tipE:4,tipF:1)internalDEF:5)ROOT:0; augur-24.2.2/tests/functional/export_v2/data/zero_value_colors.tsv000066400000000000000000000000251456376326500254010ustar00rootroot00000000000000zero_value 0 #4042C7 augur-24.2.2/tests/functional/export_v2/data/zero_value_metadata.tsv000066400000000000000000000000451456376326500256620ustar00rootroot00000000000000name zero_value tipA 0 tipB 0 tipC 0 augur-24.2.2/tests/functional/filter/000077500000000000000000000000001456376326500175365ustar00rootroot00000000000000augur-24.2.2/tests/functional/filter/cram/000077500000000000000000000000001456376326500204605ustar00rootroot00000000000000augur-24.2.2/tests/functional/filter/cram/_setup.sh000066400000000000000000000000701456376326500223100ustar00rootroot00000000000000export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" augur-24.2.2/tests/functional/filter/cram/filter-empty-output-reporting.t000066400000000000000000000031021456376326500266270ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Filter using `--exclude-all` to easily get an empty result. Test the default behavior for empty results is an error. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --exclude-all \ > --output-strains filtered_strains.txt > /dev/null ERROR: All samples have been dropped! Check filter rules and metadata file format. [2] $ wc -l filtered_strains.txt \s*0 .* (re) Repeat with the --empty-output-reporting=warn option. This whould output a warning message but no error. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --exclude-all \ > --output-strains filtered_strains.txt \ > --empty-output-reporting warn > /dev/null WARNING: All samples have been dropped! Check filter rules and metadata file format. $ wc -l filtered_strains.txt \s*0 .* (re) Ignore empty results with the --empty-output-reporting=silent option. Make sure all 3 output types are empty, except the metadata output should still include the header. This should not output any messages to stderr. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --exclude-all \ > --output-sequences filtered_seqs.fasta \ > --output-metadata filtered_metadata.tsv \ > --output-strains filtered_strains.txt \ > --empty-output-reporting silent > /dev/null $ wc -l filtered_seqs.fasta \s*0 .* (re) $ diff <(head -n 1 filtered_metadata.tsv) <(head -n 1 "$TESTDIR/../data/metadata.tsv") $ wc -l filtered_strains.txt \s*0 .* (re) augur-24.2.2/tests/functional/filter/cram/filter-exclude-ambiguous-dates-by.t000066400000000000000000000010661456376326500272630ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain date > SEQ_1 2020 > SEQ_2 2020 > SEQ_3 2020 > ~~ Confirm that `--exclude-ambiguous-dates-by` works for all year only ambiguous dates. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --exclude-ambiguous-dates-by any \ > --empty-output-reporting silent \ > --output-strains filtered_strains.txt 3 strains were dropped during filtering 3 were dropped because of their ambiguous date in any 0 strains passed all filters augur-24.2.2/tests/functional/filter/cram/filter-exclude-include.t000066400000000000000000000010541456376326500252020ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Filter with exclude query for two regions that comprise all but one strain. This filter should leave a single record from Oceania. Force include one South American record by country to get two total records. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --exclude-where "region=South America" "region=North America" "region=Southeast Asia" \ > --include-where "country=Ecuador" \ > --output-strains filtered_strains.txt > /dev/null $ wc -l filtered_strains.txt \s*2 .* (re) augur-24.2.2/tests/functional/filter/cram/filter-file-encoding-error.t000066400000000000000000000015311456376326500257620ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create a metadata file that contains a non-ASCII character. $ cat >metadata.tsv <<~~ > strain col1 > SEQ_1 ã > SEQ_2 b > SEQ_3 c > ~~ Encode it as WINDOWS-1252. $ iconv -f UTF-8 -t WINDOWS-1252 metadata.tsv > metadata-windows-1252.tsv The UTF-8 encoded file can be used without issues. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --output-strains filtered_strains.txt 0 strains were dropped during filtering 3 strains passed all filters An error is shown when using the WINDOWS-1252 encoded file. $ ${AUGUR} filter \ > --metadata metadata-windows-1252.tsv \ > --output-strains filtered_strains.txt ERROR: File 'metadata-windows-1252.tsv' contains b'\xe3' which is not valid in the expected 'utf-8' encoding. Try re-saving the file using the 'utf-8' encoding. [2] augur-24.2.2/tests/functional/filter/cram/filter-force-include-no-duplicates.t000066400000000000000000000031071456376326500274150ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Test that a force-included strain is only output once. Create some files for testing. $ cat >metadata.tsv <<~~ > strain col > a 1 > b 2 > c 3 > d 4 > ~~ $ cat >sequences.fasta <<~~ > >a > NNNN > >b > NNNN > >c > NNNN > >d > NNNN > ~~ Test all outputs with --include-where. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --sequences sequences.fasta \ > --subsample-max-sequences 4 \ > --include-where col=1 \ > --subsample-seed 0 \ > --output-metadata metadata-filtered.tsv \ > --output-strains strains-filtered.txt \ > --output-sequences sequences-filtered.fasta \ > > /dev/null 2>&1 $ cat metadata-filtered.tsv | tail -n+2 | sort -k1 a\t1 (esc) b\t2 (esc) c\t3 (esc) d\t4 (esc) $ cat strains-filtered.txt | sort a b c d $ cat sequences-filtered.fasta >a NNNN >b NNNN >c NNNN >d NNNN Test all outputs with --include. $ cat >include.txt <<~~ > a > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --sequences sequences.fasta \ > --subsample-max-sequences 4 \ > --include include.txt \ > --subsample-seed 0 \ > --output-metadata metadata-filtered.tsv \ > --output-strains strains-filtered.txt \ > --output-sequences sequences-filtered.fasta \ > > /dev/null 2>&1 $ cat metadata-filtered.tsv | tail -n+2 | sort -k1 a\t1 (esc) b\t2 (esc) c\t3 (esc) d\t4 (esc) $ cat strains-filtered.txt | sort a b c d $ cat sequences-filtered.fasta >a NNNN >b NNNN >c NNNN >d NNNN augur-24.2.2/tests/functional/filter/cram/filter-max-date.t000066400000000000000000000006341456376326500236330ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain date > SEQ_1 2020-03-XX > SEQ_2 2020-03-01 > SEQ_3 2020-03-02 > ~~ Test that --max-date is inclusive. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --max-date 2020-03-01 \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_2 augur-24.2.2/tests/functional/filter/cram/filter-metadata-date-formats.t000066400000000000000000000012251456376326500262740ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain date > SEQ_1 2020.0 > SEQ_2 2020 > SEQ_3 2020-XX-XX > ~~ Test that 2020 is evaluated as 2020-XX-XX. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --min-date 2020-02-01 \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_2 SEQ_3 Test that 2020.0, 2020, and 2020-XX-XX all pass --min-date 2019 $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --min-date 2019 \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_2 SEQ_3 augur-24.2.2/tests/functional/filter/cram/filter-metadata-delimiter.t000066400000000000000000000034001456376326500256610ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Comma-delimited metadata is allowed by default. However, the output metadata will be tab-delimited. $ cat >metadata.txt <<~~ > strain,column > SEQ_1,A > SEQ_2,B > ~~ $ ${AUGUR} filter \ > --metadata metadata.txt \ > --exclude-where column=A \ > --output-metadata filtered.txt > /dev/null $ cat filtered.txt strain\tcolumn (esc) SEQ_2\tB (esc) Colon-delimited metadata is not allowed by default. $ cat >metadata.txt <<~~ > strain:column > SEQ_1:A > SEQ_2:B > ~~ $ ${AUGUR} filter \ > --metadata metadata.txt \ > --exclude-where column=A \ > --output-metadata filtered.txt > /dev/null ERROR: Could not determine the delimiter of 'metadata.txt'. Valid delimiters are: (',', '\t'). This can be changed with --metadata-delimiters. [2] Pass the default valid delimiters explicitly in reverse order. Note: this shows how to specify a tab character in the list, though it shouldn't be necessary for most users. $ cat >metadata.txt <<~~ > strain:column > SEQ_1:A > SEQ_2:B > ~~ $ ${AUGUR} filter \ > --metadata metadata.txt \ > --metadata-delimiters $'\t' ',' \ > --exclude-where column=A \ > --output-metadata filtered.txt > /dev/null ERROR: Could not determine the delimiter of 'metadata.txt'. Valid delimiters are: ['\t', ',']. This can be changed with --metadata-delimiters. [2] Allow colon-delimited metadata. However, the output metadata will be tab-delimited. $ cat >metadata.txt <<~~ > strain:column > SEQ_1:A > SEQ_2:B > ~~ $ ${AUGUR} filter \ > --metadata metadata.txt \ > --metadata-delimiters ':' \ > --exclude-where column=A \ > --output-metadata filtered.txt > /dev/null $ cat filtered.txt strain\tcolumn (esc) SEQ_2\tB (esc) augur-24.2.2/tests/functional/filter/cram/filter-metadata-duplicates-error.t000066400000000000000000000020431456376326500271710ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Error on duplicates in metadata within same chunk. $ cat >metadata-duplicates.tsv <<~~ > strain date > a 2010-10-10 > a 2010-10-10 > b 2010-10-10 > c 2010-10-10 > d 2010-10-10 > ~~ $ ${AUGUR} filter \ > --metadata metadata-duplicates.tsv \ > --group-by year \ > --sequences-per-group 2 \ > --subsample-seed 0 \ > --metadata-chunk-size 10 \ > --output-metadata metadata-filtered.tsv > /dev/null ERROR: The following strains are duplicated in .* (re) a [2] $ cat metadata-filtered.tsv cat: .*: No such file or directory (re) [1] Error on duplicates in metadata in separate chunks. $ ${AUGUR} filter \ > --metadata metadata-duplicates.tsv \ > --group-by year \ > --sequences-per-group 2 \ > --subsample-seed 0 \ > --metadata-chunk-size 1 \ > --output-metadata metadata-filtered.tsv > /dev/null ERROR: The following strains are duplicated in .* (re) a [2] $ cat metadata-filtered.tsv cat: .*: No such file or directory (re) [1] augur-24.2.2/tests/functional/filter/cram/filter-metadata-not-found-error.t000066400000000000000000000005271456376326500267520ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try to filter on an metadata file that does not exist. $ ${AUGUR} filter \ > --metadata file-does-not-exist.tsv \ > --group-by year month \ > --sequences-per-group 1 \ > --output-strains filtered_strains.txt > /dev/null ERROR: No such file or directory: 'file-does-not-exist.tsv' [2] augur-24.2.2/tests/functional/filter/cram/filter-metadata-sequence-strains-mismatch.t000066400000000000000000000030521456376326500310020ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Confirm that filtering omits strains without metadata or sequences. The input sequences are missing one strain that is in the metadata. The metadata are missing one strain that has a sequence. The list of strains to include has one strain with no metadata/sequence and one strain with information that would have been filtered by country. The query initially filters 3 strains from Colombia, one of which is added back by the include. $ ${AUGUR} filter \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --query "country != 'Colombia'" \ > --non-nucleotide \ > --exclude-ambiguous-dates-by year \ > --include "$TESTDIR/../data/include.txt" \ > --output-strains filtered_strains.txt \ > --output-log filtered_log.tsv 4 strains were dropped during filtering 1 had no metadata 1 had no sequence data 3 were filtered out by the query: "country != 'Colombia'" \\t1 was added back because it was in .*include\.txt.* (re) 9 strains passed all filters $ head -n 1 filtered_log.tsv; tail -n +2 filtered_log.tsv | sort -k 1,1 strain filter kwargs COL/FLR_00008/2015 filter_by_query "[[""query"", ""country != 'Colombia'""]]" COL/FLR_00008/2015\tforce_include_strains\t"[[""include_file"", ""*/data/include.txt""]]" (esc) (glob) COL/FLR_00024/2015 filter_by_query "[[""query"", ""country != 'Colombia'""]]" Colombia/2016/ZC204Se filter_by_query "[[""query"", ""country != 'Colombia'""]]" HND/2016/HU_ME59 filter_by_sequence_index [] augur-24.2.2/tests/functional/filter/cram/filter-min-date.t000066400000000000000000000006341456376326500236310ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain date > SEQ_1 2020-02-XX > SEQ_2 2020-02-26 > SEQ_3 2020-02-25 > ~~ Test that --min-date is inclusive. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --min-date 2020-02-26 \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_2 augur-24.2.2/tests/functional/filter/cram/filter-min-length-no-sequence-index-error.t000066400000000000000000000006701456376326500306510ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try to filter using only metadata without a sequence index. This should fail because the requested filters rely on sequence information. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-length 10000 \ > --output-strains filtered_strains.txt > /dev/null ERROR: You need to provide a sequence index or sequences to filter on sequence-specific information. [2] augur-24.2.2/tests/functional/filter/cram/filter-min-length-output-metadata.t000066400000000000000000000007731456376326500273150ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Filter using only metadata without sequence input or output and save results as filtered metadata. $ ${AUGUR} filter \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-date 2012 \ > --min-length 10500 \ > --output-metadata filtered_metadata.tsv > /dev/null Output should include the 8 sequences matching the filters and a header line. $ wc -l filtered_metadata.tsv \s*9 .* (re) augur-24.2.2/tests/functional/filter/cram/filter-min-length-output-strains.t000066400000000000000000000007531456376326500272160ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Filter using only metadata and save results as a list of filtered strains. $ ${AUGUR} filter \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-date 2012 \ > --min-length 10500 \ > --output-strains filtered_strains.txt > /dev/null Output should include only the 8 sequences matching the filters (without a header line). $ wc -l filtered_strains.txt \s*8 .* (re) augur-24.2.2/tests/functional/filter/cram/filter-min-max-date-output.t000066400000000000000000000007261456376326500257540ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Check output of min/max date filters. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-date 2015-01-01 \ > --max-date 2016-02-01 \ > --output-metadata filtered_metadata.tsv 8 strains were dropped during filtering 1 was dropped because it was earlier than 2015.0 or missing a date 7 were dropped because they were later than 2016.09 or missing a date 4 strains passed all filters augur-24.2.2/tests/functional/filter/cram/filter-mismatched-sequences-error.t000066400000000000000000000041621456376326500273710ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try to filter with sequences that don't match any of the metadata. This should produce no results because the intersection of metadata and sequences is empty. $ echo -e ">something\nATCG" > dummy.fasta $ ${AUGUR} filter \ > --sequences dummy.fasta \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-length 4 \ > --max-date 2020-01-30 \ > --output-strains filtered_strains.txt > /dev/null Note: You did not provide a sequence index, so Augur will generate one. You can generate your own index ahead of time with `augur index` and pass it with `augur filter --sequence-index`. ERROR: All samples have been dropped! Check filter rules and metadata file format. [2] $ wc -l filtered_strains.txt \s*0 .* (re) Repeat with sequence and strain outputs. We should get the same results. $ ${AUGUR} filter \ > --sequences dummy.fasta \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --max-date 2020-01-30 \ > --output-strains filtered_strains.txt \ > --output-sequences filtered.fasta > /dev/null Note: You did not provide a sequence index, so Augur will generate one. You can generate your own index ahead of time with `augur index` and pass it with `augur filter --sequence-index`. ERROR: All samples have been dropped! Check filter rules and metadata file format. [2] $ wc -l filtered_strains.txt \s*0 .* (re) $ grep "^>" filtered.fasta | wc -l \s*0 (re) Repeat without any sequence-based filters. Since we expect metadata to be filtered by presence of strains in input sequences, this should produce no results because the intersection of metadata and sequences is empty. $ ${AUGUR} filter \ > --sequences dummy.fasta \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --output-strains filtered_strains.txt > /dev/null Note: You did not provide a sequence index, so Augur will generate one. You can generate your own index ahead of time with `augur index` and pass it with `augur filter --sequence-index`. ERROR: All samples have been dropped! Check filter rules and metadata file format. [2] $ wc -l filtered_strains.txt \s*0 .* (re) augur-24.2.2/tests/functional/filter/cram/filter-mismatched-sequences.t000066400000000000000000000017301456376326500262400ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain country date > sequence_A USA 2020-10-01 > sequence_B USA 2020-10-02 > sequence_C USA 2020-10-03 > ~~ Create FASTA file for testing. $ cat >sequences.fasta <<~~ > >sequence_A > ATCG > >sequence_B > TCGA > ~~ Create a strains file to with all strains from metadata. $ cat metadata.tsv | cut -f 1 | tail -n +2 > metadata-ids.txt Run filter. sequence_C is still output even though it is not in sequences because --include takes precedence. $ ${AUGUR} filter \ > --sequences sequences.fasta \ > --metadata metadata.tsv \ > --exclude-all \ > --include metadata-ids.txt \ > --output-strains filtered_strains.txt 0 strains were dropped during filtering 3 were dropped by `--exclude-all` 3 were added back because they were in metadata-ids.txt 3 strains passed all filters $ wc -l filtered_strains.txt \s*3 .* (re) augur-24.2.2/tests/functional/filter/cram/filter-no-outputs-error.t000066400000000000000000000004551456376326500254200ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try to filter without any outputs. $ ${AUGUR} filter \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-length 10000 > /dev/null ERROR: You need to select at least one output. [2] augur-24.2.2/tests/functional/filter/cram/filter-numerical-ids.t000066400000000000000000000010051456376326500246600ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create a pair of files with numerical strain IDs. $ cat >metadata.tsv <<~~ > strain col1 > 1 A > 2 B > 3 C > ~~ $ cat >sequences.fasta <<~~ > >1 > AAAA > >2 > AAAA > >3 > AAAA > ~~ Test that nothing is filtered out due to missing sequence data. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --sequences sequences.fasta \ > --output-strains filtered_strains.txt \ > > /dev/null 2>&1 $ sort filtered_strains.txt 1 2 3 augur-24.2.2/tests/functional/filter/cram/filter-output-contents.t000066400000000000000000000035311456376326500253250ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh The purpose of this test file is to check format and consistency among the 3 output file types. $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-date 2012 \ > --subsample-max-sequences 5 \ > --subsample-seed 314159 \ > --no-probabilistic-sampling \ > --output-metadata filtered_metadata.tsv \ > --output-strains filtered_strains.txt \ > --output filtered.fasta > /dev/null Check that the header row is identical between input and output metadata. $ diff \ > <(head -n 1 "$TESTDIR/../data/metadata.tsv") \ > <(head -n 1 filtered_metadata.tsv) Check that the row for a strain is identical between input and output metadata. $ strain=Colombia/2016/ZC204Se $ diff \ > <(grep -F "$strain" "$TESTDIR/../data/metadata.tsv") \ > <(grep -F "$strain" filtered_metadata.tsv) Check the order of strains in the filtered strains file. $ cat filtered_strains.txt Colombia/2016/ZC204Se ZKC2/2016 DOM/2016/BB_0059 BRA/2016/FC_6706 EcEs062_16 Check that the order of strains in the metadata is the same as above. $ diff \ > <(cat filtered_strains.txt) \ > <(tail -n+2 filtered_metadata.tsv | cut -f 1) Check the order of strains in the FASTA sequence output. $ grep ">" filtered.fasta >Colombia/2016/ZC204Se >ZKC2/2016 >DOM/2016/BB_0059 >BRA/2016/FC_6706 >EcEs062_16 Check the order of strains in the FASTA sequence output. $ grep ">" filtered.fasta >Colombia/2016/ZC204Se >ZKC2/2016 >DOM/2016/BB_0059 >BRA/2016/FC_6706 >EcEs062_16 Check the first 10 bases of a particular sequence in the FASTA sequence output. $ grep -A 1 Colombia/2016/ZC204Se filtered.fasta >Colombia/2016/ZC204Se gacagttcga.* (re) augur-24.2.2/tests/functional/filter/cram/filter-output-directory-not-found-error.t000066400000000000000000000006131456376326500305300ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try to output to a directory that does not exist. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by year month \ > --sequences-per-group 1 \ > --output-strains "directory-does-not-exist/filtered_strains.txt" > /dev/null ERROR: No such file or directory: 'directory-does-not-exist/filtered_strains.txt' [2] augur-24.2.2/tests/functional/filter/cram/filter-output-metadata-header.t000066400000000000000000000021551456376326500264770ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Since Pandas's read_csv() and to_csv() are used with a double-quote character as the default quotechar, any column names with that character may be altered. Quoted columns containing the tab delimiter are left unchanged. $ cat >metadata.tsv <<~~ > strain "col 1" > SEQ_1 a > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --output-metadata filtered_metadata.tsv > /dev/null $ head -n 1 filtered_metadata.tsv strain "col 1" Quoted columns without the tab delimiter are stripped of the quotes. $ cat >metadata.tsv <<~~ > strain "col1" > SEQ_1 a > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --output-metadata filtered_metadata.tsv > /dev/null $ head -n 1 filtered_metadata.tsv strain col1 Any other columns with quotes are quoted, and pre-existing quotes are escsaped by doubling up. $ cat >metadata.tsv <<~~ > strain col"1 col2" > SEQ_1 a b > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --output-metadata filtered_metadata.tsv > /dev/null $ head -n 1 filtered_metadata.tsv strain "col""1" "col2""" augur-24.2.2/tests/functional/filter/cram/filter-output-strains-no-sequence-error.t000066400000000000000000000006021456376326500305160ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try to filter with sequence outputs and no sequence inputs. This should fail. $ ${AUGUR} filter \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-length 10000 \ > --output filtered.fasta > /dev/null ERROR: You need to provide sequences to output sequences. [2] augur-24.2.2/tests/functional/filter/cram/filter-query-and-exclude-ambiguous-dates-by.t000066400000000000000000000012761456376326500311710ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain date region > SEQ_1 2020 Asia > SEQ_2 2020 Asia > SEQ_3 2020 Asia > SEQ_4 2020 North America > ~~ Confirm that `--exclude-ambiguous-dates-by` works for all year only ambiguous dates. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query 'region=="Asia"' \ > --exclude-ambiguous-dates-by any \ > --empty-output-reporting silent \ > --output-strains filtered_strains.txt 4 strains were dropped during filtering 1 was filtered out by the query: "region=="Asia"" 3 were dropped because of their ambiguous date in any 0 strains passed all filters augur-24.2.2/tests/functional/filter/cram/filter-query-and-include-where.t000066400000000000000000000010161456376326500265640ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain location quality > SEQ_1 colorado good > SEQ_2 colorado bad > SEQ_3 nevada good > ~~ Test that --include_where still works with filtering on query. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "quality=='good' & location=='colorado'" \ > --include-where "location=nevada" \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_3 augur-24.2.2/tests/functional/filter/cram/filter-query-and-include.t000066400000000000000000000010551456376326500254570ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata TSV file for testing. $ cat >metadata.tsv <<~~ > strain location quality > SEQ_1 colorado good > SEQ_2 colorado bad > SEQ_3 nevada good > ~~ $ cat >include.txt <<~~ > SEQ_3 > ~~ Test that --include_where still works with filtering on query. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "quality=='good' & location=='colorado'" \ > --include include.txt \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_3 augur-24.2.2/tests/functional/filter/cram/filter-query-backtick-quoting.t000066400000000000000000000006641456376326500265400ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata file for testing. $ cat >metadata.tsv <<~~ > strain region name > SEQ_1 A > SEQ_2 A > SEQ_3 B > SEQ_4 > ~~ The 'region name' column is query-able by backtick quoting. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query '(`region name` == "A")' \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_2 augur-24.2.2/tests/functional/filter/cram/filter-query-boolean.t000066400000000000000000000033011456376326500247070ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh A column with True and False values is query-able by boolean comparisons. $ cat >metadata.tsv <<~~ > strain column > SEQ_1 True > SEQ_2 True > SEQ_3 False > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "column == True" \ > --output-strains filtered_strains.txt 1 strain was dropped during filtering 1 was filtered out by the query: "column == True" 2 strains passed all filters $ sort filtered_strains.txt SEQ_1 SEQ_2 Note that the string value is case-insensitive. $ cat >metadata.tsv <<~~ > strain column > SEQ_1 True > SEQ_2 trUe > SEQ_3 FALSE > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "column == True" \ > --output-strains filtered_strains.txt 1 strain was dropped during filtering 1 was filtered out by the query: "column == True" 2 strains passed all filters Note that 1/0 can also be compared to boolean literals. $ cat >metadata.tsv <<~~ > strain column > SEQ_1 1 > SEQ_2 1 > SEQ_3 0 > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "column == True" \ > --output-strains filtered_strains.txt 1 strain was dropped during filtering 1 was filtered out by the query: "column == True" 2 strains passed all filters Empty values are ignored. $ cat >metadata.tsv <<~~ > strain column > SEQ_1 True > SEQ_2 False > SEQ_3 > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "column == True" \ > --output-strains filtered_strains.txt 2 strains were dropped during filtering 2 were filtered out by the query: "column == True" 1 strain passed all filters $ sort filtered_strains.txt SEQ_1 augur-24.2.2/tests/functional/filter/cram/filter-query-columns.t000066400000000000000000000037131456376326500247570ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata file for testing. $ cat >metadata.tsv <<~~ > strain coverage category > SEQ_1 0.94 A > SEQ_2 0.95 B > SEQ_3 0.96 C > SEQ_4 > ~~ Automatic inference works. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "coverage >= 0.95 & category == 'B'" \ > --output-strains filtered_strains.txt 3 strains were dropped during filtering 3 were filtered out by the query: "coverage >= 0.95 & category == 'B'" 1 strain passed all filters Specifying coverage:float explicitly also works. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "coverage >= 0.95 & category == 'B'" \ > --query-columns coverage:float \ > --output-strains filtered_strains.txt 3 strains were dropped during filtering 3 were filtered out by the query: "coverage >= 0.95 & category == 'B'" 1 strain passed all filters Specifying coverage:float category:str also works. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "coverage >= 0.95 & category == 'B'" \ > --query-columns coverage:float category:str \ > --output-strains filtered_strains.txt 3 strains were dropped during filtering \t3 were filtered out by the query: "coverage >= 0.95 & category == 'B'" (esc) 1 strain passed all filters Specifying category:float does not work. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "coverage >= 0.95 & category == 'B'" \ > --query-columns category:float \ > --output-strains filtered_strains.txt ERROR: Failed to convert value in column 'category' to float. Unable to parse string "A" at position 0 [2] Specifying category:bool also does not work. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "coverage >= 0.95 & category == 'B'" \ > --query-columns category:bool \ > --output-strains filtered_strains.txt ERROR: Failed to convert value in column 'category' to bool. Unable to convert 'A' to a boolean value. [2] augur-24.2.2/tests/functional/filter/cram/filter-query-errors.t000066400000000000000000000041451456376326500246130ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Using a pandas query with a nonexistent column results in a specific error. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --query "invalid == 'value'" \ > --output-strains filtered_strains.txt > /dev/null WARNING: Column 'invalid' does not exist in the metadata file. Ignoring it. ERROR: Query contains a column that does not exist in metadata. [2] Using pandas queries with bad syntax results in meaningful errors. Some error messages from Pandas may be useful, so they are exposed: $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --query "region >= 0.50" \ > --output-strains filtered_strains.txt > /dev/null ERROR: Internal Pandas error when applying query: '>=' not supported between instances of 'str' and 'float' Ensure the syntax is valid per . [2] However, other Pandas errors are not so helpful, so a link is provided for users to learn more about query syntax. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --query "country = 'value'" \ > --output-strains filtered_strains.txt > /dev/null ERROR: Internal Pandas error when applying query: cannot assign without a target object Ensure the syntax is valid per . [2] $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --query "some bad syntax" \ > --output-strains filtered_strains.txt > /dev/null WARNING: Could not infer columns from the pandas query. Reading all metadata columns, which may impact execution time. If the query is valid, please open a new issue: and add the query to the description: some bad syntax ERROR: Internal Pandas error when applying query: invalid syntax (, line 1) Ensure the syntax is valid per . [2] augur-24.2.2/tests/functional/filter/cram/filter-query-example.t000066400000000000000000000044421456376326500247320ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Filter into two separate sets and then select sequences from the union of those sets. First, select strains from Brazil (there should be 1). $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --query "country == 'Brazil'" \ > --output-strains filtered_strains.brazil.txt > /dev/null $ wc -l filtered_strains.brazil.txt \s*1 .* (re) Then, select strains from Colombia (there should be 3). $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --query "country == 'Colombia'" \ > --output-strains filtered_strains.colombia.txt > /dev/null $ wc -l filtered_strains.colombia.txt \s*3 .* (re) Finally, exclude all sequences except those from the two sets of strains (there should be 4). $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --exclude-all \ > --include filtered_strains.brazil.txt filtered_strains.colombia.txt \ > --output filtered.fasta > /dev/null $ grep "^>" filtered.fasta | wc -l \s*4 (re) Repeat this filter without a sequence index. We should get the same outputs without building a sequence index on the fly, because the exclude-all flag tells us we only want to force-include strains and skip all other filters. $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --exclude-all \ > --include filtered_strains.brazil.txt filtered_strains.colombia.txt \ > --output filtered.fasta \ > --output-metadata filtered.tsv > /dev/null $ grep "^>" filtered.fasta | wc -l \s*4 (re) Metadata should have the same number of records as the sequences plus a header. $ wc -l filtered.tsv \s*5 .* (re) Alternately, exclude the sequences from Brazil and Colombia (N=4) and records without sequences (N=1) or metadata (N=1). $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --exclude filtered_strains.brazil.txt filtered_strains.colombia.txt \ > --output filtered.fasta > /dev/null $ grep "^>" filtered.fasta | wc -l \s*7 (re) augur-24.2.2/tests/functional/filter/cram/filter-query-numerical.t000066400000000000000000000045141456376326500252560ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata file for testing. $ cat >metadata.tsv <<~~ > strain coverage category > SEQ_1 0.94 A > SEQ_2 0.95 B > SEQ_3 0.96 C > SEQ_4 > ~~ The 'coverage' column should be query-able by numerical comparisons. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "coverage >= 0.95" \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_2 SEQ_3 The 'category' column will fail when used with a numerical comparison. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "category >= 0.95" \ > --output-strains filtered_strains.txt ERROR: Internal Pandas error when applying query: '>=' not supported between instances of 'str' and 'float' Ensure the syntax is valid per . [2] With automatic type inference, the 'coverage' column isn't query-able with string comparisons: $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "coverage.str.endswith('.95')" \ > --output-strains filtered_strains.txt > /dev/null ERROR: Internal Pandas error when applying query: Can only use .str accessor with string values! Ensure the syntax is valid per . [2] However, that is still possible by explicitly specifying that it is a string column. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "coverage.str.endswith('.95')" \ > --query-columns coverage:str \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_2 Create another metadata file for testing. $ cat >metadata.tsv <<~~ > strain metric1 metric2 > SEQ1 4 5 > SEQ2 5 9 > SEQ3 6 10 > ~~ Use a Pandas query to filter by a numerical value. This relies on having proper data types associated with the columns. If < is comparing strings, it's likely that SEQ3 will be dropped or errors arise. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "metric1 > 4 & metric1 < metric2" \ > --output-strains filtered_strains.txt 1 strain was dropped during filtering 1 was filtered out by the query: "metric1 > 4 & metric1 < metric2" 2 strains passed all filters $ sort filtered_strains.txt SEQ2 SEQ3 augur-24.2.2/tests/functional/filter/cram/filter-query-str.t000066400000000000000000000007001456376326500241000ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata file for testing. $ cat >metadata.tsv <<~~ > strain column > SEQ_1 value1 > SEQ_2 value2 > SEQ_3 value3 > ~~ 'column' should be query-able using the `.str` accessor. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --query "column.str.startswith('value')" \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_2 SEQ_3 augur-24.2.2/tests/functional/filter/cram/filter-sequences-vcf.t000066400000000000000000000011471456376326500247020ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Filter TB strains from VCF and save as a list of filtered strains. $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/tb.vcf.gz" \ > --metadata "$TESTDIR/../data/tb_metadata.tsv" \ > --min-date 2012 \ > --output filtered.vcf \ > --output-strains filtered_strains.txt > /dev/null Note: You did not provide a sequence index, so Augur will generate one. You can generate your own index ahead of time with `augur index` and pass it with `augur filter --sequence-index`. $ wc -l filtered_strains.txt \s*3 .* (re) $ wc -l filtered.vcf \s*2314 .* (re) augur-24.2.2/tests/functional/filter/cram/filter-subsample-missing-date-parts.t000066400000000000000000000024641456376326500276420ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh $ cat >metadata.tsv <<~~ > strain date > SEQ_1 > SEQ_2 2020 > SEQ_3 2020-02-25 > ~~ If we group by year month and some records don't have that information in their date fields, we should skip those records from the group output and track which records were skipped for which reasons. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by year \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-log log.txt \ > --output-strains filtered_strains.txt > /dev/null $ cat log.txt strain\tfilter\tkwargs (esc) SEQ_1\tskip_group_by_with_ambiguous_year\t"[[""date_column"", ""date""]]" (esc) SEQ_3\tsubsampling\t (esc) $ sort filtered_strains.txt SEQ_2 Similarly, if we group by month, we should skip records that don't have month information in their date fields. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by month \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-log log.txt \ > --output-strains filtered_strains.txt > /dev/null $ cat log.txt strain\tfilter\tkwargs (esc) SEQ_1\tskip_group_by_with_ambiguous_year\t"[[""date_column"", ""date""]]" (esc) SEQ_2\tskip_group_by_with_ambiguous_month\t"[[""date_column"", ""date""]]" (esc) $ sort filtered_strains.txt SEQ_3 subsample-5-sequences-without-group-by-no-probabilistic-sampling.t000066400000000000000000000012251456376326500352250ustar00rootroot00000000000000augur-24.2.2/tests/functional/filter/cramSetup $ source "$TESTDIR"/_setup.sh Filter with subsampling where no more than 5 sequences are requested and no groups are specified. This generates a dummy category and subsamples from there. With no-probabilistic-sampling we expect exactly 5 sequences. $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-date 2012 \ > --subsample-max-sequences 5 \ > --subsample-seed 314159 \ > --no-probabilistic-sampling \ > --output filtered.fasta > /dev/null $ grep ">" filtered.fasta | wc -l \s*5 (re) augur-24.2.2/tests/functional/filter/cram/subsample-8-sequences-no-probabilistic-sampling.t000066400000000000000000000011741456376326500320470ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Filter with subsampling, requesting no more than 8 sequences. With 8 groups to subsample from (after filtering), this should produce one sequence per group. $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-date 2012 \ > --group-by country year month \ > --subsample-max-sequences 8 \ > --subsample-seed 314159 \ > --no-probabilistic-sampling \ > --output filtered.fasta > /dev/null $ grep ">" filtered.fasta | wc -l \s*8 (re) augur-24.2.2/tests/functional/filter/cram/subsample-ambiguous-dates-error.t000066400000000000000000000046771456376326500270740ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Metadata with ambiguous days on all strains should error when grouping by week. $ cat >metadata.tsv <<~~ > strain date > SEQ1 2000-01-XX > SEQ2 2000-02-XX > SEQ3 2000-03-XX > SEQ4 2000-04-XX > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by week \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-metadata metadata-filtered.tsv \ > --output-log filtered_log.tsv ERROR: All samples have been dropped! Check filter rules and metadata file format. 4 strains were dropped during filtering 4 were dropped during grouping due to ambiguous day information 0 were dropped because of subsampling criteria [2] $ cat filtered_log.tsv | grep "skip_group_by_with_ambiguous_day" | wc -l \s*4 (re) $ cat metadata-filtered.tsv strain date Metadata with ambiguous months on all strains should error when grouping by month. $ cat >metadata.tsv <<~~ > strain date > SEQ1 2000-XX-XX > SEQ2 2000-XX-XX > SEQ3 2000-XX-XX > SEQ4 2000-XX-XX > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by month \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-metadata metadata-filtered.tsv \ > --output-log filtered_log.tsv ERROR: All samples have been dropped! Check filter rules and metadata file format. 4 strains were dropped during filtering 4 were dropped during grouping due to ambiguous month information 0 were dropped because of subsampling criteria [2] $ cat filtered_log.tsv | grep "skip_group_by_with_ambiguous_month" | wc -l \s*4 (re) $ cat metadata-filtered.tsv strain date Metadata with ambiguous years on all strains should error when grouping by year. $ cat >metadata.tsv <<~~ > strain date > SEQ1 XXXX-XX-XX > SEQ2 XXXX-XX-XX > SEQ3 XXXX-XX-XX > SEQ4 XXXX-XX-XX > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by year \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-metadata metadata-filtered.tsv \ > --output-log filtered_log.tsv ERROR: All samples have been dropped! Check filter rules and metadata file format. 4 strains were dropped during filtering 4 were dropped during grouping due to ambiguous year information 0 were dropped because of subsampling criteria [2] $ cat filtered_log.tsv | grep "skip_group_by_with_ambiguous_year" | wc -l \s*4 (re) $ cat metadata-filtered.tsv strain date augur-24.2.2/tests/functional/filter/cram/subsample-group-by-empty-value.t000066400000000000000000000012671456376326500266560ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh $ cat >metadata-no-date.tsv <<~~ > strain col1 col2 col3 > SEQ1 b > SEQ2 b > SEQ3 c d > SEQ4 c d > ~~ An empty value in a --group-by column is still treated as a value for grouping. I.e. the groups here are: 1. (None, None, b) 2. (None, c , d) $ ${AUGUR} filter \ > --metadata metadata-no-date.tsv \ > --group-by col1 col2 col3 \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-log filtered-log.tsv \ > --output-strains filtered-strains.txt > /dev/null $ cat filtered-strains.txt SEQ1 SEQ3 $ tail -n+2 filtered-log.tsv | sort SEQ2\tsubsampling\t (esc) SEQ4\tsubsampling\t (esc) augur-24.2.2/tests/functional/filter/cram/subsample-group-by-missing-error.t000066400000000000000000000020421456376326500271760ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Error on missing group-by columns. $ cat >metadata-no-date.tsv <<~~ > strain col > SEQ1 a > SEQ2 b > ~~ $ ${AUGUR} filter \ > --metadata metadata-no-date.tsv \ > --group-by year \ > --sequences-per-group 1 \ > --output-metadata metadata-filtered.tsv > /dev/null WARNING: Column 'date' does not exist in the metadata file. Ignoring it. ERROR: The specified group-by categories (['year']) were not found. Note that using any of ['month', 'week', 'year'] requires a column called 'date'. [2] $ cat metadata-filtered.tsv cat: .*: No such file or directory (re) [1] $ ${AUGUR} filter \ > --metadata metadata-no-date.tsv \ > --group-by invalid \ > --sequences-per-group 1 \ > --output-metadata metadata-filtered.tsv > /dev/null WARNING: Column 'invalid' does not exist in the metadata file. Ignoring it. ERROR: The specified group-by categories (['invalid']) were not found. [2] $ cat metadata-filtered.tsv cat: .*: No such file or directory (re) [1] augur-24.2.2/tests/functional/filter/cram/subsample-group-by-region-1-sequence-per-group-seed.t000066400000000000000000000015021456376326500324610ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Filter with subsampling, requesting 1 sequence per group (for a group with 4 distinct values). $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by region \ > --sequences-per-group 1 \ > --subsample-seed 314159 \ > --output-strains filtered_strains.txt > /dev/null $ wc -l filtered_strains.txt \s*4 .* (re) By setting the subsample seed above, we should guarantee that we get the same "random" strains as another run with the same command. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by region \ > --sequences-per-group 1 \ > --subsample-seed 314159 \ > --output-strains filtered_strains_repeated.txt > /dev/null $ diff -u <(sort filtered_strains.txt) <(sort filtered_strains_repeated.txt) augur-24.2.2/tests/functional/filter/cram/subsample-group-by-week.t000066400000000000000000000024371456376326500253410ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh SEQ1 and SEQ2 translate to week=(2003, 1). SEQ3 and SEQ4 translate to week=(2004, 1). These should be in separate groups. $ cat >metadata.tsv <<~~ > strain date > SEQ1 2003-01-01 > SEQ2 2003-01-02 > SEQ3 2003-12-30 > SEQ4 2003-12-31 > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by week \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-metadata metadata-filtered.tsv 2 strains were dropped during filtering 2 were dropped because of subsampling criteria 2 strains passed all filters $ cat metadata-filtered.tsv strain date SEQ1 2003-01-01 SEQ3 2003-12-30 ISO year from 'week' takes precedence over 'year'. $ cat >metadata.tsv <<~~ > strain date > SEQ1 2003-12-30 > SEQ2 2003-12-31 > SEQ3 2004-01-01 > SEQ4 2004-01-02 > ~~ $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by year week \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-metadata metadata-filtered.tsv WARNING: 'year' grouping will be ignored since 'week' includes ISO year. 3 strains were dropped during filtering 3 were dropped because of subsampling criteria 1 strain passed all filters $ cat metadata-filtered.tsv strain date SEQ1 2003-12-30 augur-24.2.2/tests/functional/filter/cram/subsample-group-by-with-custom-year-column.t000066400000000000000000000033151456376326500311160ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create a metadata file with a custom year column $ cat >metadata-year-column.tsv <<~~ > strain date year month > SEQ1 2021-01-01 odd January > SEQ2 2021-01-02 odd January > SEQ3 2022-01-01 even January > SEQ4 2022-01-02 even January > SEQ5 2022-02-02 even February > ~~ Group by generated year column, and ensure all original columns are still in the final output. $ ${AUGUR} filter \ > --metadata metadata-year-column.tsv \ > --group-by year \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-metadata filtered_metadata.tsv > /dev/null WARNING: `--group-by year` uses a generated year value from the 'date' column. The custom 'year' column in the metadata is ignored for grouping purposes. $ cat filtered_metadata.tsv strain\tdate\tyear\tmonth (esc) SEQ1\t2021-01-01\todd\tJanuary (esc) SEQ5\t2022-02-02\teven\tFebruary (esc) Group by generated year and month columns, and ensure all original columns are still in the final output. $ ${AUGUR} filter \ > --metadata metadata-year-column.tsv \ > --group-by year month \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-metadata filtered_metadata.tsv > /dev/null WARNING: `--group-by month` uses a generated month value from the 'date' column. The custom 'month' column in the metadata is ignored for grouping purposes. WARNING: `--group-by year` uses a generated year value from the 'date' column. The custom 'year' column in the metadata is ignored for grouping purposes. $ cat filtered_metadata.tsv strain\tdate\tyear\tmonth (esc) SEQ1\t2021-01-01\todd\tJanuary (esc) SEQ3\t2022-01-01\teven\tJanuary (esc) SEQ5\t2022-02-02\teven\tFebruary (esc) augur-24.2.2/tests/functional/filter/cram/subsample-group-by-without-force-included-strains.t000066400000000000000000000013011456376326500324400ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Do not consider force-included strains for subsampling. In this test, we force-include two old strains that are the only representatives of their month/year date group (December 2015). We don't filter these strains, so they could be considered for subsampling, but Augur removes them from consideration because they have been force-included. $ cat >include_old_strains.txt <<~~ > PRVABC59 > COL/FLR_00008/2015 > ~~ $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --include include_old_strains.txt \ > --group-by month year \ > --subsample-max-sequences 10 \ > --output-metadata metadata-filtered.tsv > /dev/null augur-24.2.2/tests/functional/filter/cram/subsample-max-sequences-no-probabilistic-sampling-error.t000066400000000000000000000010641456376326500336120ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh This should fail, as probabilistic sampling is explicitly disabled. $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-date 2012 \ > --group-by country year month \ > --subsample-max-sequences 5 \ > --subsample-seed 314159 \ > --no-probabilistic-sampling \ > --output filtered.fasta ERROR: Asked to provide at most 5 sequences, but there are 8 groups. [2] augur-24.2.2/tests/functional/filter/cram/subsample-max-sequences-output.t000066400000000000000000000042261456376326500267560ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create a metadata file with 2 groups with sizes (1,5). $ cat >metadata.tsv <<~~ > strain group > SEQ1-A A > SEQ2-B B > SEQ3-B B > SEQ4-B B > SEQ5-B B > SEQ6-B B > ~~ Request a maximum of 9 strains. All 6 strains should be used, even though this means groups are sampled unevenly. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by group \ > --subsample-max-sequences 9 \ > --output-strains filtered_strains.txt Sampling at 9 per group. 0 strains were dropped during filtering 0 were dropped because of subsampling criteria 6 strains passed all filters $ sort filtered_strains.txt SEQ1-A SEQ2-B SEQ3-B SEQ4-B SEQ5-B SEQ6-B Request a maximum of 6 strains. All 6 strains should be used, even though this means groups are sampled unevenly. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by group \ > --subsample-max-sequences 6 \ > --output-strains filtered_strains.txt Sampling at 6 per group. 0 strains were dropped during filtering 0 were dropped because of subsampling criteria 6 strains passed all filters $ sort filtered_strains.txt SEQ1-A SEQ2-B SEQ3-B SEQ4-B SEQ5-B SEQ6-B Request a maximum of 5 strains. 4 strains should pass, even though this means groups are sampled unevenly. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by group \ > --subsample-max-sequences 5 \ > --subsample-seed 0 \ > --output-strains filtered_strains.txt Sampling at 3 per group. 2 strains were dropped during filtering 2 were dropped because of subsampling criteria 4 strains passed all filters $ sort filtered_strains.txt SEQ1-A SEQ2-B SEQ5-B SEQ6-B Request a maximum of 3 strains. 2 strains should pass, one from each group. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --group-by group \ > --subsample-max-sequences 3 \ > --subsample-seed 0 \ > --output-strains filtered_strains.txt Sampling at 1 per group. 4 strains were dropped during filtering 4 were dropped because of subsampling criteria 2 strains passed all filters $ sort filtered_strains.txt SEQ1-A SEQ6-B subsample-max-sequences-with-probabilistic-sampling-warning.t000066400000000000000000000025311456376326500344060ustar00rootroot00000000000000augur-24.2.2/tests/functional/filter/cramSetup $ source "$TESTDIR"/_setup.sh Explicitly use probabilistic subsampling to handle the case when there are more available groups than requested sequences. $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-date 2012 \ > --group-by country year month \ > --subsample-max-sequences 5 \ > --subsample-seed 314159 \ > --probabilistic-sampling \ > --output-strains filtered_strains_probabilistic.txt > /dev/null WARNING: Asked to provide at most 5 sequences, but there are 8 groups. Using the default probabilistic subsampling, should work the same as the previous case. $ ${AUGUR} filter \ > --sequences "$TESTDIR/../data/sequences.fasta" \ > --sequence-index "$TESTDIR/../data/sequence_index.tsv" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --min-date 2012 \ > --group-by country year month \ > --subsample-max-sequences 5 \ > --subsample-seed 314159 \ > --output-strains filtered_strains_default.txt > /dev/null WARNING: Asked to provide at most 5 sequences, but there are 8 groups. By setting the subsample seed above, we should get the same results for both runs. $ diff -u <(sort filtered_strains_probabilistic.txt) <(sort filtered_strains_default.txt) augur-24.2.2/tests/functional/filter/cram/subsample-no-sequences-quantity-error.t000066400000000000000000000006111456376326500302440ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try to group data without any grouping arguments. This should fail with a helpful error message. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by year month \ > --output-strains filtered_strains.txt > /dev/null ERROR: You must specify a number of sequences per group or maximum sequences to subsample. [2] augur-24.2.2/tests/functional/filter/cram/subsample-priority-file-error.t000066400000000000000000000023431456376326500265650ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try running with a priority file that does not exist. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --priority does-not-exist.tsv \ > --subsample-max-sequences 5 \ > --output-strains filtered_strains.txt > /dev/null ERROR: missing or malformed priority scores file does-not-exist.tsv [2] Create a priority file that is not tab-delimited. $ cat >priorities.csv <<~~ > SEQ_1,5 > SEQ_2,6 > SEQ_3,8 > SEQ_4,-100 > ~~ Try running with the above file. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --priority priorities.csv \ > --subsample-max-sequences 5 \ > --output-strains filtered_strains.txt > /dev/null ERROR: missing or malformed priority scores file priorities.csv [2] Create a priority file that does not have integers. $ cat >priorities.csv <<~~ > SEQ_1 5 > SEQ_2 6 > SEQ_3 8 > SEQ_4 a > ~~ Try running with the above file. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --priority priorities.csv \ > --subsample-max-sequences 5 \ > --output-strains filtered_strains.txt > /dev/null ERROR: missing or malformed priority scores file priorities.csv [2] augur-24.2.2/tests/functional/filter/cram/subsample-priority-file.t000066400000000000000000000010751456376326500254370ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Subsample one strain per year with priorities. There are two years (2015 and 2016) represented in the metadata. The two highest priority strains are in these two years. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by year \ > --priority "$TESTDIR/../data/priorities.tsv" \ > --sequences-per-group 1 \ > --output-strains filtered_strains.txt > /dev/null $ diff -u <(sort -k 2,2rn -k 1,1 "$TESTDIR/../data/priorities.tsv" | head -n 2 | cut -f 1) <(sort -k 1,1 filtered_strains.txt) augur-24.2.2/tests/functional/filter/cram/subsample-priority-values.t000066400000000000000000000035221456376326500260160ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create files for testing. $ cat >metadata.tsv <<~~ > strain quality > SEQ_1 good > SEQ_2 good > SEQ_3 good > SEQ_4 good > SEQ_5 good > ~~ $ cat >priorities.tsv <<~~ > SEQ_1 5 > SEQ_2 6 > SEQ_3 8 > SEQ_4 -100 > ~~ Subsample 5 strains. Note that SEQ_5 should not be dropped even though it does not have a priority score. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --priority priorities.tsv \ > --subsample-max-sequences 5 \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_2 SEQ_3 SEQ_4 SEQ_5 Subsample 1 less strain. SEQ_5 should be dropped since it does not have a priority score, which is effectively lowest priority (even compared to negative values). $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --priority priorities.tsv \ > --subsample-max-sequences 4 \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_2 SEQ_3 SEQ_4 Subsample 1 less strain. SEQ_4 should now be dropped. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --priority priorities.tsv \ > --subsample-max-sequences 3 \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_1 SEQ_2 SEQ_3 Subsample 1 less strain. SEQ_1 should now be dropped. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --priority priorities.tsv \ > --subsample-max-sequences 2 \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_2 SEQ_3 Subsample 1 less strain. SEQ_1 should now be dropped. $ ${AUGUR} filter \ > --metadata metadata.tsv \ > --priority priorities.tsv \ > --subsample-max-sequences 1 \ > --output-strains filtered_strains.txt > /dev/null $ sort filtered_strains.txt SEQ_3 augur-24.2.2/tests/functional/filter/cram/subsample-probabilistic-sampling-not-always-used.t000066400000000000000000000012231456376326500323240ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Ensure probabilistic sampling is not used when unnecessary. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by region year month \ > --subsample-max-sequences 10 \ > --probabilistic-sampling \ > --subsample-seed 314159 \ > --output-metadata filtered_metadata.tsv Sampling at 10 per group. 2 strains were dropped during filtering 1 was dropped during grouping due to ambiguous year information 1 was dropped during grouping due to ambiguous month information 0 were dropped because of subsampling criteria, using seed 314159 10 strains passed all filters augur-24.2.2/tests/functional/filter/cram/subsample-probabilistic-sampling-output.t000066400000000000000000000015061456376326500306340ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Check output of probabilistic sampling. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by region year month \ > --subsample-max-sequences 3 \ > --probabilistic-sampling \ > --subsample-seed 314159 \ > --output-metadata filtered_metadata.tsv WARNING: Asked to provide at most 3 sequences, but there are 8 groups. Sampling probabilistically at 0.3633 sequences per group, meaning it is possible to have more than the requested maximum of 3 sequences after filtering. 10 strains were dropped during filtering 1 was dropped during grouping due to ambiguous year information 1 was dropped during grouping due to ambiguous month information 8 were dropped because of subsampling criteria, using seed 314159 2 strains passed all filters augur-24.2.2/tests/functional/filter/cram/subsample-skip-ambiguous-dates.t000066400000000000000000000033641456376326500267010ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try to subsample a maximum number of sequences by year and month, given metadata with ambiguous year and month values. Strains with ambiguous years or months should be dropped and logged. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by year month \ > --subsample-max-sequences 5 \ > --output-strains filtered_strains.txt \ > --output-log filtered_log.tsv > /dev/null WARNING: Asked to provide at most 5 sequences, but there are 6 groups. $ grep "SG_018" filtered_log.tsv | cut -f 1-2 SG_018\tskip_group_by_with_ambiguous_month (esc) $ grep "COL/FLR_00024/2015" filtered_log.tsv | cut -f 1-2 COL/FLR_00024/2015\tskip_group_by_with_ambiguous_year (esc) Group by 'year month week'. Using 'week' has some restrictions - 'year' should warn and 'month' should error. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by year month week \ > --sequences-per-group 1 \ > --output-strains filtered_strains.txt > /dev/null WARNING: 'year' grouping will be ignored since 'week' includes ISO year. ERROR: 'month' and 'week' grouping cannot be used together. [2] Group by 'week'. Check the number of strains that have been dropped due to ambiguous day. $ ${AUGUR} filter \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --group-by week \ > --sequences-per-group 1 \ > --subsample-seed 0 \ > --output-strains filtered_strains.txt \ > --output-log filtered_log.tsv > /dev/null $ grep "skip_group_by_with_ambiguous_year" filtered_log.tsv | wc -l \s*1 (re) $ grep "skip_group_by_with_ambiguous_month" filtered_log.tsv | wc -l \s*1 (re) $ grep "skip_group_by_with_ambiguous_day" filtered_log.tsv | wc -l \s*3 (re) augur-24.2.2/tests/functional/filter/data/000077500000000000000000000000001456376326500204475ustar00rootroot00000000000000augur-24.2.2/tests/functional/filter/data/include.txt000066400000000000000000000000331456376326500226270ustar00rootroot00000000000000NotReal COL/FLR_00008/2015 augur-24.2.2/tests/functional/filter/data/metadata.tsv000066400000000000000000000075461456376326500230010ustar00rootroot00000000000000strain virus accession date region country division city db segment authors url title journal paper_url COL/FLR_00024/2015 zika MF574569 South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574569 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ PRVABC59 zika KU501215 2015-12-XX North America Puerto Rico Puerto Rico Puerto Rico genbank genome Lanciotti et al https://www.ncbi.nlm.nih.gov/nuccore/KU501215 Phylogeny of Zika Virus in Western Hemisphere, 2015 Emerging Infect. Dis. 22 (5), 933-935 (2016) https://www.ncbi.nlm.nih.gov/pubmed/27088323 COL/FLR_00008/2015 zika MF574562 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574562 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ Colombia/2016/ZC204Se zika KY317939 2016-01-06 South America Colombia Colombia Colombia genbank genome Quick et al https://www.ncbi.nlm.nih.gov/nuccore/KY317939 Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples Nat Protoc 12 (6), 1261-1276 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538739 ZKC2/2016 zika KX253996 2016-02-16 Oceania American Samoa American Samoa American Samoa genbank genome Wu et al https://www.ncbi.nlm.nih.gov/nuccore/KX253996 Direct Submission Submitted (18-MAY-2016) Center for Diseases Control and Prevention of Guangdong Province; National Institute of Viral Disease Control and Prevention, China https://www.ncbi.nlm.nih.gov/pubmed/ VEN/UF_1/2016 zika KX702400 2016-03-25 South America Venezuela Venezuela Venezuela genbank genome Blohm et al https://www.ncbi.nlm.nih.gov/nuccore/KX702400 Complete Genome Sequences of Identical Zika virus Isolates in a Nursing Mother and Her Infant Genome Announc 5 (17), e00231-17 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28450510 DOM/2016/BB_0059 zika KY785425 2016-04-04 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785425 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 BRA/2016/FC_6706 zika KY785433 2016-04-08 South America Brazil Brazil Brazil genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785433 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 DOM/2016/BB_0183 zika KY785420 2016-04-18 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785420 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 EcEs062_16 zika KX879603 2016-04-XX South America Ecuador Ecuador Ecuador genbank genome Marquez et al https://www.ncbi.nlm.nih.gov/nuccore/KX879603 First Complete Genome Sequences of Zika Virus Isolated from Febrile Patient Sera in Ecuador Genome Announc 5 (8), e01673-16 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28232448 HND/2016/HU_ME59 zika KY785418 2016-05-13 North America Honduras Honduras Honduras genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785418 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 SG_018 zika KY241688 2016 Southeast Asia Singapore Singapore Singapore genbank genome Ho et al https://www.ncbi.nlm.nih.gov/nuccore/KY241688 Outbreak of Zika virus infection in Singapore: an epidemiological, entomological, virological, and clinical analysis Lancet Infect Dis (2017) In press https://www.ncbi.nlm.nih.gov/pubmed/ augur-24.2.2/tests/functional/filter/data/priorities.tsv000066400000000000000000000001611456376326500233740ustar00rootroot00000000000000COL/FLR_00024/2015 50 PRVABC59 100 COL/FLR_00008/2015 10 Colombia/2016/ZC204Se 10 ZKC2/2016 100 VEN/UF_1/2016 50 augur-24.2.2/tests/functional/filter/data/sequence_index.tsv000066400000000000000000000012721456376326500242060ustar00rootroot00000000000000strain length A C G T N other_IUPAC - ? invalid_nucleotides PAN/CDC_259359_V1_V3/2015 10771 2952 2379 3142 2298 0 0 0 0 0 COL/FLR_00024/2015 10659 2921 2344 3113 2281 0 0 0 0 0 PRVABC59 10675 2923 2351 3115 2286 0 0 0 0 0 COL/FLR_00008/2015 10659 2924 2344 3110 2281 0 0 0 0 0 Colombia/2016/ZC204Se 10608 2907 2332 3093 2275 0 1 0 0 0 ZKC2/2016 10807 2955 2389 3159 2304 0 0 0 0 0 VEN/UF_1/2016 10808 2958 2383 3152 2315 0 0 0 0 0 DOM/2016/BB_0059 10035 2563 2089 2741 2015 621 6 0 0 0 BRA/2016/FC_6706 10366 2747 2203 2915 2165 329 7 0 0 0 DOM/2016/BB_0183 10621 2910 2343 3099 2269 0 0 0 0 0 EcEs062_16 10812 2960 2388 3158 2306 0 0 0 0 0 SG_018 10659 2906 2367 3110 2257 19 0 0 0 0 augur-24.2.2/tests/functional/filter/data/sequences.fasta000066400000000000000000003754231456376326500235000ustar00rootroot00000000000000>PAN/CDC_259359_V1_V3/2015 gaatttgaagcgaatgctaacaacagtatcaacaggttttattttggatttggaaacgag agtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgc taaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggac ttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattca cggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagagg ctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatg ctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttggcctcctgc tgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttgg acagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgtt atatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgcccta tgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaactt gggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagccg tgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaat caagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggtt tcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtca tatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtca gcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgtcgtcttggaac atggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggtta caacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcag acatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcag acactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggac tttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccg ggaagagcatccagccagagaatctggagtaccggataatgttgtcagttcatggctccc agcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaagg ttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctag gacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatga ataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacg ctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaagg acgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcaca cggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctg gccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactcct tgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtca cagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcgg tggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactg aaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttaca ttgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcacca ttggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagaca cagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatc aaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattc tcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctta tgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgg ggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctaca acgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattgg cagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaa tggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatg gagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacaga gattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtact tcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaat gcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtat ttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccg ttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattg agagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacat gtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatca tacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggaccc aaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggca ctaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactg caagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgt tctgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaa gcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccc ttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaa agatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaa tgagtgacctggctaagcttgcaatcttgatgggtgccaccttcgcggaaatgaacactg gaggagatgtggctcatctggcgctgatagcagcattcaaagtcagaccagcgttgctgg tatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcct cgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttctcatcaatg gttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatca ccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtgga gagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtg tgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacc ccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggcccccta gcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcag atatagagatggctgggcccatagccgcggtcggtctgctaattgtcagttacgtggtct caggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatg cggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttct ccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatga ccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacg tgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaa agggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacac aagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaag gatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcagg atctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgagg tgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaa tatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaactt caggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcg tgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactc ctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgc atcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaa caagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaag cccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaa cagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatca gagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagta tagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttca tgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatgg acaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatc attctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagctt gtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagt tccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgg gcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatac ttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgccc agaggagggggcgcataggcaggaatcccaataaacctggagatgagtatctgtatggag gtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttg acaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaag tagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaac tcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataa cctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagaca gtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtgga tggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctg ggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatga cagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaa gcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttt tggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggca tagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctct cggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtgg tgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatca tcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggaga gaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggat tctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaa ctttcattaccccagctgtccaacatgcagtgaccacttcatacaacaactactccttaa tggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacg catgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctga ccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgc aggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctg ttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggaga aaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcgga ccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtggg aaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacattttta ggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttgg tcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttga accagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgca gagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtccc gaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaagg tcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaag ttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgc aaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcgg ctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtgg aagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccag gagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagc gactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacac atgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacga gccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatg tgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaaga tcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacg agaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggt cagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtga ctggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttca aggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagca tggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtacca aagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagagg aaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtgg acaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgg gaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggt atatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatc actggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcg gatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactg ctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaacc aaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaaca aagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcga gacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacc tagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgt ggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggc tcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttg cacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtgga aaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaaca agctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactga ttggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctag caaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactga tggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacct ggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaaca gagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaaatggacag acattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagac cgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcatag gtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaag ggtccacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagcc acagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcc tatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcag aggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggc gaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaag agggactagtggttagaggagaccccccggaaaacgcaaaacagcatattgacgctggga aagaccagagactccatgagtttccaccacgctggccgccaggcacagatcgccgaatag cggcggccggtgtggggaaatccatgggtct >COL/FLR_00024/2015 tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttatt ttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggatt ccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaa gaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattct agcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttc agtggggaaaaaagaggctatggaaacaataaagaagttcaagaaagatctggctgccat gctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcgg aattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgc atactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacatt ggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccat gagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtg caacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacg gagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtc gcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggat attcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctc aacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcat caggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggt tgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgt cgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgcta tgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagccta ccttgagaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctg gggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatg ctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgtt gtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactga tgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggg gggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagattt gtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacat tccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagc actggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtca agaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaa gggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaa gggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaac actgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggt tccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgc taaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccacc atttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggca caggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaat ggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcatt gggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtc ctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaa tggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagc cgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtac aggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctga ctccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggat ctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgc aatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccat gtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggc ttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatgg tgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggagga tcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcatt agagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtga tctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatct gatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaataga agagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccag agagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtt tgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatc tctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcac aatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcc caggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatca catggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaa gaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgat cctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccacctt cgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagt cagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcat gctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacct gatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttcc acgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcac actgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctct gaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgc tgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaa gcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctgg agggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaat tgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacat cacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctaga tgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatact caaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctgg agcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgc tcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtag actgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactat gtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactg gggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctg ggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacat ccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctgga ttacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggact ttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggag gagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagct aactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagt ccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgc tgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaa tgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacg tctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccactt cacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcga ggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactc caactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctt tgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacgg caatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaa gacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaac tgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatg cctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcac acatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggaga tgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttga agcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcg acctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaag gaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggt tgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaa caccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagt gctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcatt caaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaac actgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcat gcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccct agagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtctt gatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgc atggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgt gttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaa ccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatga actcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagagga gggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccat ctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcata caacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaa agggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactc acaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgta cttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctgg catcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaat tgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccag cgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgc aacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttc actgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaac aagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaa atggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcagg catcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacggg aggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacct gcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgc cgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatga agaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtgga cgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatc atctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattg gcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactat gatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccact ctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaa aagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagt gaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctga agctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcgga aacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatga ggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaa accctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatgg tcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcac tcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacg gccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattagg ggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaag gttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttg tgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaaggg cagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttgg attcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggct gggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggat gtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatga agctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaa gtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagt tatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctct taacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttct agagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagag caacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagcc aattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaa ggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttg ctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccg ccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccg ggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacag aagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttcc aactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacat gcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagacccc agttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatc tctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacat ggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcg ctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtc aggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggaga agctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgct gcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcagga tgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcag ctgtggatctccagaagagggactagtggttagaggaga >PRVABC59 gttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaaca gtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaa aaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgag cccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcag gatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtct catcaatagatggggttcagtggggaaaaaagaggctatggaaacaataaagaagttcaa gaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgagg cgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggt cactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccat atcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggaca catgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccaga tgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatca caaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccaccag gaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgat tagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgc ttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgat tgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtat gtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggc acaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgga ggtaagatcctactgctatgaggcatcaatatcagacatggcttctgacagccgctgccc aacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaac gttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgac atgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatct ggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatga cacaggacatgaaactgatgagaatagagcgaaagttgagataacgcccaattcaccgag agccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacagg ccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaa ggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccaca ctggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgt cgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggc tgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaat ggataaacttagattgaagggcgtgtcatactccttgtgtactgcagcgttcacattcac caagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggac agatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagt tgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgat gctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaa gatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgt gagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttgg aggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatc attgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggtt gggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgtt gatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaa ggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacag gtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggga agatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagt agaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtggg atctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagct gccccacggctggaaggcttgggggaaatcgtatttcgtcagagcagcaaagacaaataa cagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaa cagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggt tagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaa ggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggag gctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacatt gtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccact cagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtga agagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatg tggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatg gtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggta tggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgac tgcaggatcaactgatcacatggaccacttctcccttggagtgcttgtgatcctgctcat ggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggc agtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaat tttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgct gatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattg gacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctc cgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaat acgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctgac accactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggg gtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcat ggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgtt gctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcct gatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggc cgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacat tgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccg gctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccc catgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagc cataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgc tctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgta cagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaaga gggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagg gagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatg gaagctagatgccgcctgggatgggcacagcgaggtgcagctcttggccgtgccccccgg agagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacat tggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtg tgggagagtgataggactttatggcaatggggtcgtgatcaaaaacgggagttatgttag tgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccctcgat gctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggag agttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagc tccaaccagggttgtcgctgctgaaatggaggaggcccttagagggcttccagtgcgtta tatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcca tgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatat tatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaac aagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccg tgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagag agcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgt tccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggt catacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtg ggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgt catagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggc tggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaa tcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaaga ccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcct catagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaa gcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgt ttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctt tgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccag acacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatca tgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagt gatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattga caacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggc ccaattgccggagaccctagagaccataatgcttttggggttgctgggaacagtctcgct gggaatcttcttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggt gactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgc atgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagca aagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctggg cttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatct aatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggcc agcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaaca tgcagtgaccacctcatacaacaactactccttaatggcgatggccacgcaagctggagt gttgtttggcatgggcaaagggatgccattctacgcatgggactttggagtcccgctgct aatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgct cgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccca gaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactga cattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcat agcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctgg ggctctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaa ctcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttc tctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacagg agagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttcta ctcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaa ggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggtt ggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagg gggctggagttactacgtcgccaccatccgcaaagttcaagaagtgaaaggatacacaaa aggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccg tcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtg tgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcct ctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtg cccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggagg actggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagc gaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgga cgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggc tgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggat ccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggc ttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggt tgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgac cgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgcc agacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaaga gctaggcaaacacaaacggccacgagtctgcaccaaagaagagttcatcaacaaggttcg tagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgga agctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgag aggagagtgccagagctgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggga atttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttct agagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcagg aggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcg tataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcag gtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcctt ggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagc tgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggaca agttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatat ggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagt gaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggaga tgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatga tatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactg ggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtc cattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccagg ggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggca gctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgt gccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatg gatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacca catggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggga agacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacat taaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggacta cctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagc accaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcc tgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatgg cacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccac gcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggg gcctgaactggagatcagctgtggatctccagaagagggactagtggttagagga >COL/FLR_00008/2015 tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttatt ttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggatt ccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaa gaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattct agcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttc agtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccat gctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcgg aattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgc atactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacatt ggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccat gagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtg caacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacg gagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtc gcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggat attcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctc aacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcat caggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggt tgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgt cgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgcta tgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagccta ccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctg gggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatg ctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgtt gtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactga tgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggg gggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagattt gtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacat tccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagc actggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtca agaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaa gggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaa gggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaac actgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggt tccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgc taaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccacc atttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggca caggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaat ggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcatt gggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtc ctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaa tggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagc cgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtac aggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctga ctccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggat ctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgc aatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccat gtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggc ttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatgg tgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggagga tcatgggttcggggtatttcacactagtgtctggatcaaggttagagaagattattcatt agagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtga tctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatct gatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaataga agagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccag agagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtt tgaggaatgcccaggcactaaggtccacgtggaggaaacatgtgaaacaagaggaccatc tctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcac aatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcc caggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatca catggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaa gaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgat cctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccacctt cgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagt cagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcat gctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacct gatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttcc acgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcac actgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctct gaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgc tgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaa gcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctgg agggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaat tgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacat cacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctaga tgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatact caaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctgg agcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgc tcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtag actgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactat gtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactg gggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctg ggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacat ccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctgga ttacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggact ttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggag gagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagct aactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagt ccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgc tgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaa tgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacg tctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccactt cacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcga ggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactc caactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctt tgattgggtgacagatcattctggaaaaacagtttggtttgttccaagcgtgaggaacgg caatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaa gacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaac tgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatg cctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcac acatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggaga tgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttga agcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcg acctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaag gaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggt tgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaa caccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagt gctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcatt caaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaac actgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcat gcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccct agagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtctt gatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgc atggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgt gttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaa ccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatga actcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagagga gggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccat ctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcata caacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaa agggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactc acaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgta cttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctgg catcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaat tgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccag cgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgc aacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttc actgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaac aagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaa atggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcagg catcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacggg aggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacct gcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgc cgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatga agaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtgga cgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatc atctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattg gcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactat gatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccact ctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaa aagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagt gaaatatgaggaggatgtgaatctcggctctggcacgcgggccgtggtaagctgcgctga agctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcgga aacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatga ggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaa accctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatgg tcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcac tcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacg gccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattagg ggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaag gttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttg tgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaaggg cagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttgg attcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggct gggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggat gtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatga agctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaa gtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagt tatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctct taacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttct agagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagag caacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagcc aattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaa ggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttg ctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccg ccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccg ggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacag aagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttcc aactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacat gcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagacccc agttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatc tctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacat ggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcg ctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtc aggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggaga agctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgct gcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcagga tgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcag ctgtggatctccagaagagggactagtggttagaggaga >Colombia/2016/ZC204Se gacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttg gaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgt caatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgcc agccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagccttttt gagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaa aaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaat aatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttgg cctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatat gtacttggacagaaaagatgctggggaggccatatcttttccaaccacattggggatgaa taagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatga atgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgac gtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctag aagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctg gttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaa ccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagcca aaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcat aggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgt cttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacataga gctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatc aatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaa gcaatcagacactcaatatgtttgcaaaagaacgttagtggacagaggctggggaaatgg atgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaa aatgaccgggaagagcatccagccagagaatctggagtaccggataatgttgtcagttca tggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatag agcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttgg aagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattactt gactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattacc ttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtaga gttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagc agttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggct gtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtc atactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgg gacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctca gatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgt aatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttgggga ctcttacattgtcataggagtcggggagaagaagatcacccaccactggcataggagtgg cagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtctt gggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaaggg catccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctc acaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctat ttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgc tgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgtt cgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccg tagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgt ttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctgga agagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagagg tccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaa atcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacact gaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggtt cggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtga tccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggcta ctggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagat gaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtga tctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggcta caggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatg cccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatc aaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgccccc actgtcgttctgggctaaagatggctgttggtatggaatggagataaggcccaggaaaga accagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatca cttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaat gaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggagg attttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaat gaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagc gttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggc cttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttct catcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactga caacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgt ggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaa aggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggct ggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctg gccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgc caaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagtta cgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatggga aaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtgg tgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggt cctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggta cgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaagga agtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctagg ttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgt cacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgt caagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggca cagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactct gcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagc aggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaa tggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggagga agagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtctt agacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagc cataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaat ggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcaccca ctctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactaca gccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatcc ctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgc catcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcacc aattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggt gacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagat cgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttga gacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttc agagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagcc ggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccag cgctgcccagaggagggggcgcataggcaggaatcccaataaacctggagatgagtatct gtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaat gctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggc cgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctt tgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgc cggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataat ggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaacc gaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtt tgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccagg acacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcaga gactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccat tatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaa caagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcat gtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctatt gctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggc aatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatg gttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaac cataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgc cttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaacta ctccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgcc attctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaac acccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatccc agggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaa gaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgaccccca agtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatact gtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccac tttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaa catttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgc tggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggc ccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccga ggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgc tgtgtcccgaggaagtgcaaagctgagatggctggtggagcggggatacctgcagcccta tggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccat ccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgt gttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttca tatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcc tgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaa aagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaac cctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaa ctctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtc caccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatga ggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaa catgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggtt ctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccac acaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctggga tgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaag agttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggt tatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagt ctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatt tgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggc tctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaa catgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgc catctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaa cgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattaca aagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcaga tgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaat caccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacata ccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacat tatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatt taccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgca agacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatg ggataggctcaaacgaatggcagtcagtggagatgaytgcgttgtgaagccaattgatga taggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacaca agagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccacca cttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaaga tgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgc ttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacct ccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggag aactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggt gtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaa atggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagg gcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcag gatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttggg cgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgct agtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaa accaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgag cccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaag aaggtggcgaccttccccacccttcaatctggggcctgaactggagat >ZKC2/2016 agttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagccttcttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagatactaatgtcggaattgttggcctcctgctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacttggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcggacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaa cgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggctgataaccgctaaccccgtaatcactgaaagcactgagaactccaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaggagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgtgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcaccaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttccaggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagtaacttagtaaggtcaatggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa ttttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggcttgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggag ctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtgatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacaccatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgccgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtctggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc acgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggag tgatggaagccttgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgc tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctacgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtagccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagctgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccatgttggtgcaaagctatgggtggaacatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tttccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcccaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggacgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagatccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaagacagttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggagta tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggctgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaggccaattgatgataggtttgcacatgccctcaggttcttgaatg atatggggaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaggaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaag caccaatcttagtgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccaccctttaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggtct >VEN/UF_1/2016 agttgttactgttgctgactcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagatgctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagaaactagtgtcggaattgttggcctccttctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagccgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggtttcgctttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgtcgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtttgcaaaagaa cgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgttgtcagttcatggctcccagcacagtgggatgattgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgtggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaagaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcacccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttctgggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa tcttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaagtcagaccagcgttgctggtatccttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggagggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggttggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtg cgctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaataaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc atgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggag tgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgt tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaatatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggtgc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaata tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatg atatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaag caccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggtctt >DOM/2016/BB_0059 tggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagata ctagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagac gtgggagtgcatactacatgtacttggacagaaacgatgctggggaggccatatctttcc caaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtg atgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcg attgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaag gtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgc aaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcg aaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttt tgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccgg catacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtg ggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggaca aaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagat cctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaag gtkaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtgg acagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgcta agtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtacc ggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggac atgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaag ccaccctggggggttttggaagcctaggactggattgtgaaccgaggacaggccttgact tttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggt tccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaaca acaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttc tagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatgg atggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaac ttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcc cggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggac cttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggt tgataaccgccaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaac ttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcaccc accactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtg ccaagagaatggcagtcttgggagatacagcctgggactttggatcagttggaggcgctc tcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttg gaggaatgtcctggttctcacaaatcctcattggaacgttgctgatgtggttgggtctga acacaaagaatggatctatttccctcatgtgcttggccttagggggagtgttgatcttct tatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacga gatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagt accatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggta tctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaagggg agctcaatgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaa aaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacg gctggaaggcttgggggaaatcgtacttcgttagagcagcaaagacaaataacagctttg tcgtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggaacagctgttaagggaaaggaggctg tacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaaga gggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacag atggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatc acaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttg aaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaa gaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgca gggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatgg agataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtgactgcaggat caactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcagg aagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctgg tagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgg gtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcgg cattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacacccc gtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttgg aaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcga tggttgttccacgcactgataacatcaccttggcaatcctggctgctctgacaccactgg cccggggtacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgc tcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgg gactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaa ggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcg cattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcg gtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagag caggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatg tggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagag agatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccct ttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatggg atgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaa tgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtct ttcacactatgtggcatgtcacaaaaggatccgcgctgagaagcggtgaagggagacttg atccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctag atgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagag cgaggaacatccagactctgcccggaatatttaagacaaaggannnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcgagccttcgatgctgaaga agaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttc ctgaaatagtccgtgaagctataaaaacaagactccgtactgtgatcttagctccaacca gggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaa cagcagtcaatgtcacccattctggaacagaaatcgtcgacttaatgtgccatgccacct tcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatg aggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttg agatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcat ttccggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgggtcatacagc tcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttg tcgtgacaaccgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagatt ccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggaccca tgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaaca aacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcac actggcttgarkcaagaatgctccttgacaatatttgcctccaagatggcctcatagcct cgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttagga cggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctgg cctatcaggttgcatctgccggaataacttacacagatagaagatggtgctttgatggca cgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggag agaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccc tgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaag ccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcg ctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgc cggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatct ttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttg gggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcc tcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctc cccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgatca ccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaa ggagagaggagggagcaaccataggattctcaatggacattgacctgcggccagcctcag cttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtga ccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttg gtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgatag gttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgc actacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaa crgcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgaca caatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtag ccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctga tcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctcta cagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatct acacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccc tgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctaca aaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtg tggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagc ggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctgga gttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggcc ctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtctcaaga gtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacatag gtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatgg tgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccataca ccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtca gagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagca acaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggccta ggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaa gctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtg agcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatg gaagctatgaggcccccacacaagggtcagcatcctctctagtaaacggggttgtcaggc tcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacacca caccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagaccccc aagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggca aacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatg cagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtga acgatccaaggttctgggctctagtggacaasgaaagagagcaccacctgagaggagagt gccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaa aggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcg aagcccttggattcttgaacgaggatcactggwtggggagagagaactcaggaggtggtg ttgaagggctgggattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagggcacagggccttggcattgg ccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaag ggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtca cttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctg aggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaact ggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcg ttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaa aagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaag ttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtgg ttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggat ggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctccttt atttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttg actgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgacca ttgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaag acaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgt ggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaaca cagtcaacatggtgcgcaggatcataggtgaggaagaaaagtacatggactacctatcca cccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatct taatgttgtcaggcc >BRA/2016/FC_6706 agtttgaagcgaaagctagcaacagtatcaacaggttttatttyggatttggaaacgaga gtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgct aaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggact tctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcac ggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggc tatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgc taggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgct gaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttgga cagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgtta tatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctat gctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttg ggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgt gacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatc aagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggctt cgcgttagcagcagccgccatcgcttggcttttgggaagctcaacgagccaaaaagtcat atacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcag caatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaaca tggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttac aacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcaga catggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcaga cactcaatatgtctgyaaaagaacgttagtggacagaggctggggaaatggatgtggact ttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgg gaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctccca gcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggt tgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctagg acttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaa taacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgc tggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaagga cgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacac ggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctgg ccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactcctt gtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcac agtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggt ggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactga aagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacat tgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccat tggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacac agcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatca aatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattct cattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttat gtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggg gtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctataa cgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggc agcagcagtcaagcaagcctgggaagatggtatctgcgggatctcttctgtttcaagaat ggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatgg agttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagag attgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtactt cgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatg cccactcaaacatagagcatggaacagctttctwgtggaggatcatgggttcggggtatt tcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgt tattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattga gagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatg tgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcat acccaagtctttagctgggccactcagccatcacaataccagagagggctacaggaccca aatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcac taaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgc aagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgtt ccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaag caacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccct tggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaa gatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaat gagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgg aggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggt atctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctc gtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatgg ttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcac cttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggag agcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgt gaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccc catcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctag cgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcaga tatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctc gggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgc ggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctc cctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgac catctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgt gaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaa gggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacaca agttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaagg atccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcagga tctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggt gcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaat atttaagacaaaggatggggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnagccttcgatgctgaagaagaagcagctaactgtcttagacttgca tcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaac aagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagc ccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaac agaaatcgtcgacttaatgtgcyatgccaccttcacttcacgtctactacagccaatcag agtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtat agcagcaagaggatacatttcaacaagggttgagatgggcgaggcrgctgccatcttcat gaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatgga caccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatca ttctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttg tctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagtt ccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatggg cgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatact tgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgccca gaggagggggcgcataggcaggaatcctaacaaacctggagatgagtatctgtatggagg tgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttga caatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagt agcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaact catgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataac ctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacag tgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggat ggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgg gaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgac agagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaag caggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgctctt ggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcat agggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctc ggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggt gctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcat catggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagag aacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggatt ctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaac tttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaat ggcgatggccacgcaggctggagtgttgtttggtatgggcaaagggatgccattctacgc atgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgac cctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgca ggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgt tgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaa aaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggac cgcctgggggtggggggaggctggggctctgatcacagccgcaacctccactttgtggga aggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttag gggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggt caagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaa ccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcag agaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccg aggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggt cattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagt tcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgca aagctatgggtggaacatagtccgtcttaagagtggggtagacgtctttcatatggcggc tgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtgga agaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagg agccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcg actgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacaca tgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgag ccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgt gaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagat cattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacga gaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtc agcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgac tggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaa ggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcat ggtctcttcctggttgtggaaagagctaggcaaacacaagcggccacgagtctgtaccaa agaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagagga aaaagrktggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtgga caaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggg aaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagtcgcgccatctggta tatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatca ctggatggggagagagaactcaggaggtggtgttgaagnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnacagggccttggcattggccataatcaagtacacataccaaaacaa agtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgag acaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacct agtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtg gctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggct caaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgc acatgccctcaggttcttgaatgatatgggaaaagtcaggaaggacacacaagagtggaa accctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaa gctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgat tggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagc aaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgat ggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctg gtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacag agtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacaga cattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagacc gcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcatagg tgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagg gtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggc >DOM/2016/BB_0183 gtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagag tttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgcta aaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggactt ctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacg gcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggct atggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgct aggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctg accacagctatggcagcggaggtcactagacgtgggagtgcatactacatgtacttggac agaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttat atacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatg ctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgg gttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtg acgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatca agagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttc gcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcata tacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagc aatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacat ggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttaca acaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagac atggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagac actcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactt tttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccggg aagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccag cacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggtt gagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctagga cttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaat aacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgct ggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggac gcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacg gcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggc cacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttg tgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcaca gtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtg gacatgcaaactctgaccccagttgggaggttgataaccgccaaccccgtaatcactgaa agcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacatt gtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccatt ggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacaca gcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaa atttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaatcctc attggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctcatg tgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgggg tgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataac gacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggca gcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatg gaaaacatcatgtggagatcagtagaaggggagctcaatgcaatcctggaagagaatgga gtccaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagaga ttgcccgtgcctgtgaacgagctgccccacggctggaaggcctgggggaaatcgtacttc gttagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgc ccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtattt cacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgtt attggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgag agtgagaagaatggcacatggaggctgaagagggcccatctgatcgagatgaaaacatgt gaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcata cccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaa atgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcact aaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgca agcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttc cgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagc aacttagtaaggtcagtggtgactgcaggatcaactgatcacatggatcacttctccctt ggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaag atcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatg agtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgga ggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggta tctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcg tgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggt tttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcacc atggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggaga gcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtg aagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacccc atcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagc gaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagat atagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctca ggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcg gaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctcc ctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgacc atctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtg aagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaag ggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaa gttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaagga tccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggat ctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtg cagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaata tttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttca ggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtg atcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcct gttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcat cctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagctataaaaaca agactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcc cttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccattctggaaca gaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcaga gtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtata gcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatg accgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggac accgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcat tctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgt ctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttc cagaaaacaaaacatcaagagtgggactttgtcgtgacaaccgacatttcagagatgggc gccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatactt gatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccag aggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggt gggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgac aatatttacctccaagatggccttatagcctcgctctatcgacctgaggccgacaaagta gcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactc atgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataact tacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagt gtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatg gacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctggg aaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgaca gagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagc aggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttg gggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcata gggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcg gaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtg ctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatc atggtagcagtaggtcttctgggcttgatcaccgccaatgaactcggatggttggagaga acaaagagtgacctaagccatctaatgggaaggagagaggagggagcaaccataggattc tcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaact ttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatg gcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgca tgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgacc ctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcag gcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgtt gtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaa aagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggacc gcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaa ggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttagg ggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtc aagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaac cagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcaga gaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccga ggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtc attgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagtt caagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaa agctatgggtggaacatagtccgtctcaagagtggggtggacgtctttcatatggcggct gagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaa gaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagga gccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcga ctgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacat gagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagc cagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtg aatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatc attggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgag aaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtca gcatcctctctagtaaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgact ggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaag gaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatg gtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaa gaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaa aaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggac aaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggga aaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtat atgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcac tggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcgga tatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgct ggctgggatacccgcatcagcaggtttgatctagagaatgaagctctaatcaccaaccaa atggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaa gtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgaga caagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaaccta gtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtgg ctgctgcggaggtcagagaaagtgaccaactggttgcggagcaacggatgggataggctc aaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgca catgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaa ccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaag ctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgatt ggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagca aaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatg gccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctgg tcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacaga gtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagac attccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccg cgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggt gaggaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaaggg tctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccac agcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagccta tagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagag gacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcga ccttccccacccttcaatctggggcctgaactggagatcagctgtggatccccagaagag g >EcEs062_16 agtagttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaa cgttagtggacagaggctggggaaatggatgcggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagactgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatccatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaagaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa ttttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaggtcagaccagcgttgctggtatctttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtg ctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagctgttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgctatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacaactcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc atgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagccgcttttggag tgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgc tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtgggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggagcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaacactggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatacaggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagtttatcaacaaggttc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaaaacggttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaata tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatg atatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgctcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaatagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacgcctggagtgctgtaag caccaatcctaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggagatcgga >SG_018 atgnnnnnnnnnnnnnnnnnnnccggaggattccggattgtcaatatgctaaaacgcgga gtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggt catgggcccatcaggatggtcttggcgattctagcctttttgaggttcacggcaatcaag ccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaata ataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggag aagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctgaccacagct atggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaagcgat gctggggaggccatatcttttccaaccacactggggatgaataagtgttatatacagatc atggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgag ggggtagaaccagatgacgtcgattgttggtgcaacacgacgtcagcttgggttgtgtac gtaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccc tcccattccactaggaagctgcaaacgcggtcgcagacctggttggagtcaagagaatac acaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttcgcgttagca gcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtc atgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggac tttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgt gtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtc agcaacatggcggaggtaagatcctactgctatgaggcatcaatatcggacatggcttcg gacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagatacccaatat gtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggaaaa gggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatc cagccagagaatctggagtaccggataatgctgtcagtccatggctcccagcacagtggg atgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacg cccaattcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgt gaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcac tggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagac accggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgcc aaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgct ggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaa tgtcgcctgaaaatggacaaacttagattgaagggcgtgtcatactccttgtgtaccgca gcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggta cagtacgcagggacagatggaccctgcaaggttccagctcagatggcggtggacatgcaa actctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgag aactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcatagga gtcggggagaagaagatcacccaccactggcacaggagtggcagtaccattggaaaagca tttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggac tttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttgga gcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacg ttgctgatgtggttgggcctgaacacaaagaatggatctatttcccttatgtgcttggcc ttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtg gacttctcaaagaaggaaacgagatgcggtacaggggtgttcgtctataacgacgttgaa gcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtc aagcaagcctgggaagatggtatctgtgggatctcctctgtttcaagaatggaaaacatc atgtggagatcagtagaaggggagctcaacgcaatcctggaagaaaatggagttcaactg acggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagactgcccgtg cctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagca gcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaa catagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagt gtctggctcaaggttagagaagattattcattagagtgtgatcctgccgttattggaaca gctgttaagggaaaggaggctgcacacagtgatctaggctactggattgagagtgagaag aatgacacatggaggctgaagagggcccacctgatcgagatgaaaacatgtgaatggcca aagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtct ttagctgggccactcagccatcacaacaccagagagggctacaggacccaaatgaaaggg ccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccac gtggaggaaacatgtggaacaagaggaccgtctctgagatcaaccactgcaagcggaagg gtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaa gatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagtaacttagta aggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgctt gtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcata agcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctg gctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgta gctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatctttcatc ttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttg caaactgcgatttccgccttggaaggcgacctgatggttctcatcaatggttttgctctg gcctggttggcaatacgagcgatggttgttccacgcactgacaacatcaccttggcaatc ctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggcctt gctacttgcggggggttcatgctcctctctctgaagggaaaaggcagtgtgaagaagaac ttaccatttgtcatggccctgggactaaccgctgtgaggctagtcgaccccatcaacgtg gtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactc acagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatg gctgggcccatggccgcggttggtctgctaattgtcagttacgtggtctcaggaaagagt gtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcact ggaaacagtccccggctcgatgtggcactagatgagagtggtgatttctccctggtggag gatgacggtccccccatgagagagatcatactcaaagtggtcctgatgaccatctgtggc atgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactgga aaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagacc acagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtg ggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcactg agaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtca tactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttg gccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagaca aaggatggggacattggagcggttgcgctggactacccagcaggaacttcaggatctcca atcctagacaagtgtgggagagtgataggactctatggcaatggggtcgtgatcaaaaat gggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgc ttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagct gggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgt actgtgatcttagctccaactagggttgtcgctgctgaaatggaggaagcccttagaggg cttccagtgcgttatatgacaacagcagtcaatgtcacccactctgggacagaaatcgtt gacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaac tataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaaga ggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacg ccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtg gaagtcccggagagagcctggagctcaggctttgattgggtgacggaccattctggaaaa acagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacgaag gctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaaca aaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaacttt aaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgag agagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggaggggg cgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggtgggtgcgca gagactgatgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatctac ctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccatt gagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaaga ggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagat agaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggca gaggtgtggaccagatacggagagaaaagagtgctcaaaccgaggtggatggacgccaga gtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagagga gcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattc caggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcagaccttac aaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctg ggaacagtctcgctgggaatctttttcgtcttgatgcggaacaagggcatagggaagatg ggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgag ccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacct gagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagca gtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagt gacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggac attgacctgcggccagcctcagcttgggccatctatgctgccctgacaactttcattacc ccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggcc acgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggacttt ggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtg gccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagct gcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatgga atagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatggga caggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctggggg tggggggaggctggggccctgatcacagctgcaacttccactttgtgggaaggctctccg aacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttac ttggctggagcttctctaatctacacagtaacaagaaacgctggtttggtcaagagacgt gggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcg gccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcc cgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccggggaagtgca aagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatctt ggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtg aaaggatacacaaaaggaggccctggtcatgaagaacccatgttggtgcaaagctatggg tggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgt gacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacgg acgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgt ataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgt aggtatgggggaggactggtcagagtgccactctcccgcaactcaacacatgagatgtac tgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctc ttggggcgcatggacgggcccaggaggccagtgaaatatgaggaggatgtgaatctcggc tctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaac cgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccaccca tataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctct ctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcaca ggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtg gacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcc tggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttc atcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtgg aagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaaga gagcaccacctgagaggagagtgccagagctgtgtgtacaacatgatgggaaaaagagaa aagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggcta ggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatgggg agagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtccta gaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggac acccgcatcagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaa gggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaag gtccttagaccagctgaaaaagggaagacagtgatggacattatttcaagacaagaccaa agggggagcggacaagttgtcacttacgctctcaacacatttaccaacctagtggtgcaa ctcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcgg aggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatg gcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctc aggttcttgaatgatatggggaaagttaggaaggacacacaagaatggaaaccctcaact ggatgggacaactgggaagaagttccgttttgctcccaccatttcaacaagctccatctc aaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcc cgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatat gcgcagatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgcc atttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccat ggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggatt gaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctat ttgggaaaaagggaagacttatggtgtggatctctcatagggcacagaccgcgcaccacc tgggctgagaacattaaaaacacagtcaacatggtgcgcagaatcataggtgatgaagaa aagtacatggactacctatccacccaagttcgctacttgggtgaggaagggtctacacct ggagtgctgtaagcaccaatcttagtgttgtcaggcctgctagtcagccacagcttgggg aaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcccatagtcaggc cgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgag tcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttcccca cccttcaatctggggcctgaactggagatcagctgtggatctccagaagagggactagtg gttagaggagaccccccggaaaacgcaaaacagcatattgacgctgggaaagaccagaga ctccatgagtttccaccacgctggccgccaggcacagat augur-24.2.2/tests/functional/filter/data/tb.vcf.gz000066400000000000000000012062301456376326500221770ustar00rootroot00000000000000G[tb.vcf̽{s9/wPƜh7j8ؚ-ѶPBEŢv!* 㗿|=~/n&/zyw?޾zy}{5^,_M߽thO yC #~ϋ>Lo/ow^5ϧ{(<].*I=}WqLf*7˯?-^r~1]ot;kAʏNcu-&M&6[+Owrk%Ou"qk*NobO?%77w׷c V{^hG͋/W?k,9b戩.N /w˯/bV9c>i'|Mn'o~{Ê7w~}y2[Nqwxy_ӗ/=/^N~Mǽ׾S^tm=iޏYO7K<}y7M7* p"-/a}LG_&_nn~`G?^ίGч17<MWB&fLJ,k?H~|/?]]Nn}_t|?^9 ve~rNK4|ӛ7y>nzKc/;7}Ƀm|s]0^Ô6d ~ŵu'3+@xw|M |+bsK?:q*A<Cuo]Loّ;^~p^ulOpz}9^-:b_ݕ:?1Oo߽~ɍW}:p(?'71~}mOLm|l~wׯ[Ƕn@B'!<Ƶv=͛/^QM5ϗ-Ve5o?!t|nHzpx?/-~{hbvdx<^x |q;^|}y Qr{xW~$? ?&KW~Tnk'\||{v$2Nc^׉ބA ?G2|O g8BNgw#U4{W?^Si(}e ts:w͸c? U0Ff١naC݈u#1ԍP7j@j@j@f 5P#5P#5P#5P 5 P 5 P 5P 5P3h@fnh@fR7l 4u3@#[7Cl6fCl6fCl6fCl6fCl6fCl>Cl>Cl>Cl>Cl>Cl1ԀC H1ԀC H1ԀC H1ԀC H1ԀCMr)r)r_~~5ĦGjqGjqPjdFjdj@P#=TH;CŎP#mCPA(=TJCPA(=TJCPA(=TJCPA(=TJCjdCEP,=T4KCEP,=T4KCEP,3T4 2CEP,3T4 2CEP,3T4 2CEP,3T4 1C3P 3T8 0C3P #f]?[?ѻ7LcD1/&J9??čU9ׯ?߾_SFWG7?/duh1 yq}{6 o?E˘d@pn!f2k&\ۘbsx=9鷗h\>L^A6'/>ܼ0PI̟R:]qYc#:No7˯Cāpf2HE] hJA~v Oyu?t>24a" {-~-oӛ %%49~oSmLdO^BN~~ 0W_ӺUj~1z{oSoӘ;s_gW/`*cނ_*2?bq͘s4Zaeb3n^|vsoGG/n4ixWp@#,`a=,n^LqF7wyoO.ڦN~~=ik^4«U?;0y6?:/w~W}|;X}翜g;Txf#!}HPQ;rӇ@;ƜN>}/o^6 kK^uA))zW?^~?4 { i;xL:v6]1<>.ȦȐɖ?4Ry|w 4P8Y,_ÃC*/6<׷믓o;Ϳx?]3jNts͉'?QD~N95'xr/' _mvП&:Mwiw rY:Owl4*G)Nw콄0Yf 'ѫn6uMWF'M|\(pa;w+C. teNO~.+IU+~"wI\W-kK(u'lCBsx4p:je^TՋmpZh[U[[X_X:ymbprdTh"{IBw>]_-|.C{g/«ދ W צ0+t*(IC?LY ;rWp$8uY\_Q*. \+t n17I0q6Mw'+8~Z3)=‡S!_'GGA|z&Iz}7 {I3Cf2y$ҡ}iQY7(0F%7IѾ +EħI\UMݍj- .6k:,W}.aSe!ՉNrbo>2k%'la_ٸ ûFO٬;-h'Gu_y91k?]Nޤh茮^r MV \6h:1_9m k`2 c.zK}t6̍?Msџf,4h黷b_`Sڱ}Wd ~n&# JȜ hJ @!0ٱh?Sd5i! -oTkv _d)o@؞W:!BZz~3@)+71` & 0M"RBLf ?7N$r>qFxpQgzUc@vحE^C\aH&Tjm҂ŜtW&%L2*+-/ͻm@S36 t^+0פtnVkxROJz+xAna,|z&&Ul^o&^r邞8G3޷_L<&s{^߮saYo}=Vv7\8 ۖй|Q$EhsNKV NZe/T|q:ŜUGTbQYes*d}2\ A` o>C6E3B԰dݰޣ<5}SCvF֬ 6A 5e()U`hW$nB 'Q9_LIsQepn ooO #u Ċ,1J~jN%#mM z?1z7}/2| {k^~p}™j: ̬k1лmNh:$:3Pq=[@Hn}4"I"*{CkZt㧙cedfm{d"0n^ A_' sZ8u`+3MmXCe!:.-X6a D3ЁLj*%b"k 렕˭I&6tPjT-rv~qq~vqv8=UH}tNst5MsDh,EYy/jm/.Nr~vz O|N#.|KOz5G!mp3nktc. \CkvWKaRI@g¦d$o9Z L֥'\:6 39& CbE,q\՜昛֢&eApTaWN,%F :k}3t@Mf@8Ѻc#] 5~ 'E8L+d;ZxX9%70}p?kkmx(K5 %5NhX慉t٨Ti1FÉN̑Ds,mnE;t O^@a*,~AD/}Md< ZMu. *yz[BRd{:"I(EmPfJ_A9.]:VO+!YlK58ifBuw}OaSZ_ 飁Oɑc_HHh?bwhdˮ߻}&~zk=C{Ț`kp'>ГL5\T;%jJkZ-M~`X2NEB N#MF[90}O޾1-3+^oՉ̆MT@H"U9Œ?mY\gU)AH[&+-W\U׏UӰt^ ^7逍tH'&D{`w?UVifm$gK ;' |1<΢MNYQ!֌~S]ࣙfiňM3G4"5@yh.fqra{HY ld|=C8yA8yQ_14h2܂`:GFư ؓ_b1O[{3sa(R C9|DmI+:M[2;MHNzh;YH),|7hjS)ȜܩFYۓ I[rȞśͱ-oXi@{yL7;8%-X̗N&Q g<krEoɀzkrB&eWΪӱoiR6a&GLY+Sr8@RiAJGJk~Dgo;5#T-$7|tIck.WD,8LZVĢm1HKl*Ysյ$ *x1mA#zL@>8%{eI\xӃ HF,>u¤t j8\m( O=> #czg$)>f)&Ux7% 0B]sޘ#, Y5'* ϰ(dY71|29P[:P&88,RI|]Uuia t.\s|MQ Qצ1UR[*$hbfK\w[V~uqϕ䙷6|(YaP@m4H JgbTty<-Ty-(|u-\u&1|>zb 9pQt((bYÆ"ђ$Kdd> w,phw \qCa=Iy„U|J] ; LuFBDqp:* ._q7::$.1 fŨBrI\J5{B9[Pa3*;U& UY. 쀝9vZ1& D M6u-_R*mkMQͭvx|~|.b b՘./.<=S<_N3y6_^2/a~@/6,qx1U׷˺; >'Z[C:V~`g0Pcf WT1 9K"U|L=hZK R:&P䎙l0$Ѹc;^5yf^'mP3`!W#0~% %]ǭ+ @7KUDI#e* k5\o,'- D/1buTEZ3) TnאǍl~l4t)ؕlӳ)II|@2=l,:]|aBCm! tO{$18`]LɼkaCb7&R* 6JrAKMi{ 9/Rs!g!;.a#P͚of`it<ćܹhBҢĹgw/%,BL `x%kϏ~Lj {$[ƾv,dj$I@]ن2Es\LPHs)ȔK)!ջ`c'[q$C!*f};i!mT֌ܠuq4I>֡u#Ɯ5#,`dcaP?Olt)Ә2Ue %&]պT Wg^eZSF u+zVfZs^ՀkUz.HoUd ̂n=%X a*<̥DZ$ãxv\`⫀3De:kSiq0\lıjH[Яle*qjٝO,2fˊer`~k{FB-`K M4`dZeCTCTSrϣ3rNOm_ )oE6ps6<:b;%uH+.-Me0Q{ĀL{H:R|;)(7o@1c[b$ܹ<Ĭiz̚q*bVF lC# p0"D_+#. " 2DeE^G 䄯$Ǜm!.K $*AK,$WMYWHaӺnv}9 w+ f=jF{1]H/ޒh:nCAkwN :ᥚ!QET]qeb?S>T#YH&nJ[Jsm:m|.Z94e#fWH80Rx ͘>P~m؟q ~H*?^p[7sn4窴8LN3DrVpα Mױn-ԒD=PCy a)7UU'X0WejlmQct^oPwt~YFoٯ.LK])z_R~ȫFh=cVykT1J#`u]aF< %J>O"2iv){.JM]n"h+wh a-FŬo$^nST;y{U1a1[B¾J #|VQAELTD(-}+̑,Qh%ɀ7kJi08Z) ;*u|U_Ǽ=17DZh13Bp<:yNNmA Ha]*<ɏHbs<뛄Ϩ7ʩK:ďٕ]ܑ G+>Nn]/F\#>{Hț80u~+C?66Ibl$]&/{M( ħ*-6EN52L*FP\s8]+y] (@L*$C58q=8%%L.󻯓/aS/\L-w*6\ JasB1mJxJ Qb]'oA~ etyg_ `P~Zʈ/l#]IG`)>:WV|e+Xlv"'|L]A`   i{,[vϻW lkl>ACYq~`IImJyM$HDOPwG8 $X0qvuCRٕk(rLKVk(/*aڒڞj9}&N 1#+]t^_;-MYI[7I9;%lrSb])d,p *a|*Vē̊5;qa)9x*#m{{aC"U*D eOpXZH )b l*+W_ryTdcK5 X *ԢDk\ݶ[͢&_ZߗHlZ9.[|CJn)(ݷ%.S2~#_=ہe8ųF|=iz<:>GU(kMa|ե`CٺɸG_Sj^7py*yJx[CG. ݝ'*Bj ePie{sK\*RWw,fYs SҪvz}$͟376V^:6+R(s{{ȉ>9 pP7k)IEjE{bXM RDj? :)Y)k"Qꀉp#QY$( /">$DITvL<#_&ըR2Ү퟊3$S&T+Yy;rwi= dgȾs9VѫQX%[tɓw/؊7"HP i]3-gt(b-Ĕ*&ꩄN81Kt2ꝫI}yr [d& hܽAV*jRt,ܥ :,ض*)-T 4KaQRȻI~~{lO@SCk g´X +15G\( μ!; öG{G liZcUodpɖ?4+2\YO̮ﮯuk}%~PY92`sa-C) 4kjx9Xך.&S1YQUJ&gcn?م C P;a'lZڇx2gf=p4]]JA! 5/޳56]2@M! .RԘZW0 4 3=ut:V$PE[Λg$Vρ($򄇹w7O@glDƳPՕwR&Lk - <U-PFЫTn [5JjB(HXF֟ H[ *)8|z'F;ۈJ8-v1˛XkfZ`%Rt`YY.Z%AN-RXiwMjM8:緀 BF5|ëTtg% F:ݥXEH:;php@^E!Ȃkjg[*wK^]a h^^Iyݷ5bLn {=v߼y1 !;P-F~T@k$9=OrzMNH+@`?13 W% K;2\x]Rx e%GWIz0#.}DBrø(ʬׯPqzϜk䤊~Hu44^a/p_mfknX5Uֲ+f8&93K݁Z{e RA?b9,a)'O2SffAqۚڏ׬XzfUn]"H7ի"v>.}(FWD+<8Hܱd!2oY ]M2WlfK%QDˎZ'U}kD=3: S T&;庬'WX ayJH{`o@3M x7iᶅ-sBɖ%gU &פngȱZqH"Eojy,e$֦TnF[bnBntbw@}֒.o#ɖ?4 Oqף^[ag7€ Md.bchDp~z%3R7hQ>lBQcZs/y%WOU]8 u3yql}@slY4[ͨaD] <}Qd\+2&^{"mHAc >Ց N=I7AiK,0I*d&R* /RDE)ALĺU434H#lȘ[PDvbgoE$[2] )@"X,̹?60k8M0C(j7)pq'1 @TU!ӦL+kxcv !j -ɤ0x0~`XVBVvg3zmx VY ܬW8S$uF2vm)whm#ݰb{b\/fx|5vǓ}\>)6]ag͊%4zx< bS2Qⵘ+ ;)چ~Vre0qeȗWWI}z|$HV!zdLGMڦGU!w73dniBVgCUN7"p`pV-M^F=D"U(\.P[7CP$q|ʼn9T\&HhfX!z§a~׈ ) `$5]q 2E1!t hSNI æ ʨdJPO2! PV(ٰ!+h-Cj|>g .,@ dH/@C'NZjC*;&,IRPeQ }x`$鯓bK*-0{`= GZ]fJnlD,2!U1u<5UyB|QPlm.2xS :ftRHA%$iZQzn35:@Υ*Jv-r&@)HivbWocweh#͛;0mL>zg(ePjbide( ]Jhm.N 77ۊ 71FH1ӊٕS{侷ii<]| h e k6Yx3knpY˭8>q66+G32Mv:SS4XRX_RfNYrxsV@gsBtĕX}iV@aM3pz?\N K BI hE65cSSL f??#&6TsOL,*m ˨SRd Ooa*[ J>!o8jf ]pV!D>*yrI>WÅ8q%iYe>j&6Q}O$!sΦp &Fڃa0=WVm_L%~f1)(>тRg!^S<<'62w  vB 6PNu0Z-s6aE7 OFnX舽ܝfw;]e3v-؄V*D"'Puhw6;$u]%Q! ""U:iP`/+|?&@/Un79<>Y6OSGS k 7y@VIϳ쪼BK0H.pzY1mv׬TA(CI?`uVg"#`;4B@τǰ/u$onxD0]U2HR&MnWv_/Om,dNW*'c:DUR[ʙ_Wi\J`x"aFr_O$b6X?oK8`*~#IÛQQ[?W;$;wG0N%H%ػ@m(RH7Nwj9[BʴN̴ZX$kRœpAs[}1ߥW)oSQ6oUٳ֍qk>n)u @=|*&)#Ynt<=)v9U1ej4F%M[@MZ\,PA[LBwE+L7}-(솽m6sm(.]M5nNRs:1.U!Vs,O6wdJHDQ-2q_:' +QrSA$ T.( `$ҖS#YkSw!!o9HV ͜Yli>dRl0M9qDfizih8$(uubod25CN>J&*h /+B;-2_w` )C+̞haxm}qy]4NFEZ&,[(4,iHo(?Gx З墏J!l{X5< T"Jk/DMĪmmBE'\ 0!ÕƬȰ&5g1k$63&]Eɥ^˴.Hw^c=~-gvCW5N9<% رDps#^ Tk2/MRj|d4DO M IYmZ:Y@s̊͝LUxZAHCmcmLJ@}#M$@:@CJtX騷-Ӓu  h#eQ8pq";2PXNQg/2  | 9Mv՟ZZFJ`v Mbɖ(a1-(LC+{ŻSwe Ry.EkDfu?YcÄc^R'́{(3Y dRl-!gW 7ܘ#1JOA XqL@#'A7:;ƿ' -\NNu`mb]&kLRs6Vf%r' VYH#}Qe+6˼܋`weklZfЫ5Bh씖'+ t+r^BMROgPJ(n>Q$'ʼJoތ%2o#V<|c.9Qީڹ 16[^Ms~B9=[$P5P_+&!)q3W mqo6sn(aikL+hS*oP@G+΋Q*5r s~/#&_lZj^IDBxQP~߾woߏǷ?B{gvيS*K`ԈOo^aocCE9Fmq U0W um*nB5q$Mu9'?}{@y5N(H Qq1 3(4zUJD Q%0z(e]B9$EԱ&hĨNs$NF0fP<b2rowH0 >lp1tv='|AwZØ ߾jZI"*4&:4L- *3J 擪ʫ,L5f$G#d|0TjCEX q/wYYdus^n9'uaO\LJ[j[ybL4E"Q~K*D}cwl= /ϖknpBNH%ܺϥXwX(`ߟkR@GW C|^ߤ,WYCx j2m6'򄐒m?AU! 1%ff[Y*=ʖ$ Wt[Ag;1 ~Ȩ&~#.y(w뷻d\wSeu X^m'-k*dk.y&<+o߻_,dXVц5w븜PmG- oX}QˌhmPg]QuoS1FqUV+g\{.S" j:c峺̔v\kt[ꠂ.7*ĵpu<[d$*=L*L;l'ԟ#!kt _~yE+"[]=KϔQo-h:M9o9TŮ&! 助)qhoINLK'Íצ91.dI=Nyld+V,xRxL/%Z.% VW$t=bI,pMU:1.yH2qf-ꅽz;(oY; ].k%?.6TPRWWª"<'j{iH{$ӥU:=$$]Dz. ݖ(~)0eغ\ YG GqCt48 ^џZb6,gۧO;b jsEcHoĹuɖ?42zxfyꇽ;ysA +%C1O"M]Ǫ%>j)FdcXKțHKhPj t] (mɴJDDjT&ZpnğmYi!l,¾V-((1슳窿kYd:lZVuDnj✕#w$#!rP1Ѧ{SAj-Z/u2*w$\wYs!I)gE`^b͹VcG_.ςt?/a't叐pŷÃ+ScP[I &[> tG>QT&oCgR0 ccd:"X^_UX!¸#\4/O?ckD%#b;hBMa~$ 9-|v߆5ۄP~9 "?KV^Nlh5)thΌyTX!n70p41> g?1=|_%;sU 5vk`DZ3-4:u"5fzW.]͋+!dtf]- Y%DgZT 07h\OFQԳ㪢v(~jR?WE{I/ˊzs)'eno%[ȡ~ht};o9@ػԕ^k'sڜAa+kג'yW">HWkJPE2EFbgKjӍ-k"!VAK680S8Sj݆#kn3셽蚶oeX[Р귌+e)fC󉹂:tF +W3N " Ck+[( R8&&Y D;`e9۪.B#K5b݆?ETé/rmPc|PT0AVRм1-ص2m pՔNvחy_<@tu+Be͘>hhJS h-P9nC0j4v~jtI8t3/oc.uU|heu*LQjKJ6a,x&&R/q RkPr ][1ޟ9bva*AmPn"ܖ4Z e"3~qwSf\\vlwlm(.iM$Bͽ*91gUn2O m]> c1MwRƶE%pu]Sf)gPIu\w j|;n,7ĿB|)tׅ:I8v8IPKKkVJ&QyrRֻ(BR&PlyY1ˋTc `=HB^%֛X}:3J%i NN/3 FXXk90Tv ҆E1* \R:uyQ _V|;$\ ]mXJ$hdzsY̼+Bƶ_wT 6|n=9>7T#nrɷ{.g9NJ*qeZGpH$`g $GFNu 1|>&YtNè:r e ner};j.A,Yq>3N4'F7m#iHY%|3m<7=$U]-jH'V#]YX]!օt "#IWj.XR'_,soqh10R Iވd4KE8aR[_.U_Cy-CU(*.cQ \Tb([XVI#q㕲J.~w$6o%MC˯d9c. |oI|v10@Z׷utWœB 0C>YH*[6s%c= #m@OQyhZfHC ټ6fxWPPQsX$D[/4*~q >tic?$k-/Ù90-/"pcrq rʹ_YQgl[i(V0r?KNF8H]-g%iV1Cf %5ښ6(N$%΂$[4K'J?x4 /e.UQT=)-c)8G7bVd ~®؋cK3s1U;ȊUd@]2-T::Cpm3b 3ԂtYhI= C;򋴮eU#ūyy*ȝV˽W놨0 ow  /@jR֨m &Oc]y ʤ:9Q,ߔя@c0c "{tŚjydOv=Vx&wRHVQ0%@V!p $ *nV7~:KUbp0 ųaz ˢns4 .شmme ֐$=!dz($w0CC,ŷ릞uC "Ѩh&lQٟy_A㒵4#  hÆ%es7xR19KLM K4 bK4&@Ґ])m Ta]ӂg1] ta:Jmȳl5BVbu.&ՆuA|lRjoKi e 5ͪdI7a/wn57|?`@`ko "8߼YS~+_Rd^"i=@kp"ҳ^Ι[allK깈1z?/;>4 UCȁE! N׫#aT!|HذW?pRr2r>=*)T [jM0 I5_(U RSu2tMX ΊD]9'ĖYV)7J݌=u7$hL!.}#?.dܸ%{c/Iim̛,<[R,r{TD_9,&yaIZ~fZA6yHӒUr(ç ЀZnwFiH]Cfop̾L`8y;Y X]A OS<枫^W=Aqrlɏh vI "Z=h޺$0\1{<%T:Bb%ޢ-B"( $K,B"m0%V[¯ R^ݔA j$4- FK .t4+ť^%8DtaSF~?|]cUaq).QT:wM~\:S[䭴Mk[B&21mEnLb\O 4vb&u?bT8j59J|#!ll"h:LN5*s0IG"h| A[RDtOL U =ĹIp%`**6PĠ`Zh[L_1J{mB̰oęɖ?4Dx{6Hpvg4n늴$&, 4Uu.lM51q*݋P0)gS bM-/w>Q zXt,_bwkHh{s,ͨUikSm(Gco#V%@w?z$I&|yoE Q:Li?KEOȟqQM/T_ &Whwam;G i:F#pp ZF5 1Mb%1B̖Ic3 izv MJ 9.`vcwϿǷO~マ?yç*Rs(?Hju0yn7i}Lktha 2Z[耒ϙa0*:|;mev`O60vx SxduWUT;?CnPxgYg߷FQ$GGr٠U,!#EP> $J[U.h8h)w)`@LfUPƆs*"[L`Cv#Q]J.+m؁(5duG靮W`܍þ_")w3$8ɣ=l"2 BcW7ġJ)+8ĚLcx>|0yic .y)/!D^z Y!TuV]CD. V`~y)~ӻnU ]썍6]I/\v+ $W9lUuB`g 6(*%_q7LQ8 㬱\ޓa] TjS[-N &ƏeDC)QW#p3kR6S`C !" `@OӤ5忀gLB UW ~_u9LF1̱8.2M&ޖv TPWKq8\ڳxe4#m&U=*J:[^_7Wo6xkM))B+6'|>L/07!u_J]3FG]u´BkÈ!Xf#ƬhDnr! ;qN"Z8!zFY TRj?\'2Jб !Oxux^%y0P+<>ӻZ u)ySY%4yާe0N1&9-cr *~Wz *1t<ޠ#f-HCI9"b>v:Ltyau3Hqj"fVɸRXk|<7.VɓB"ڤ\@g6)踏E[x'bmRmK'„Kaxd6{dӼ1Qkfd6\ gTtn]76&'uJudܿd& QI%//22NlԮxiakxȵpvGG."C1;0rZH ';+b론q2E>t[ix W40F %y#3r*Iʃ^=inCߔ'|/9`qw>W8iPg A/\jIdx0O)D2;1ȸ^t#9~ӯ_s h9Gtu[C[zp-Π9̵1iw6("ࡻHQTn8ȩ~mV3k-7'Ͷ-׍ zf[-mZ"@e^xmE f=^fq exQyX\8}_N/<=L\C0x2A8\Y;7کTƥ&CEԀHWgt)>wY.'(z'z0dZey(]݇uXɤ<͋uE3 #Wܭ@ ~G4s 3p0AJjUI$ 9`_Ѹgה]j@T\hL xsnXmn^{v]8Hn͍eTl7ܐ Oim?R*A)|Oc|hE~j1Ǘ᰷W#.$e)6^](n$Fr'RK& L5@t1  {(" |Zդ~g5e"@&,G'E_G3D{mD^<(`R4nr6.. |>p(q%i{T7 4 !'TxbMX k*H2w?%Wq <-/2Nlh8-Cu+wIYĂWJ'lB f)u!Gm'KPUEH aԊFl3LĐdcUOG#=64k¶de]ĖEm{Iyt1dzjlLׁ*t'NJ>6)a2#v0>&/vrE8:L5B6*/hfDp,Ҡ9Tj< bx3iFtĄfb)(k~ BakC9pn( 9KPdh0/O.CŕHPAKͭFز8|YzERflfo3cw|' c5\4>kٲ.Ǡ*Q0H*͂ʦ!k&bks}4B1Ǯ^!sgMgl|qt(WȞlQ2>.^K̼a@JR Τ OQ#zl!dK©xEDLmO"5YSo vLŔx]b`2jEǚڝ䄭$GV(Vs%!$P^{%&ln%(kAi`TJ$ML; -p|z[%l } {S AmXm'q*ji|J^R!Ж dݱX ۣ *~2 [?m=OP(zAJ+t[ .SZ3_ \~{._k&L[Zjoۣ%bJd) Q;t j)j AP)VrNSWa9]by%V 8樵4aC[<߄Z֧wmÜ5_SPKo6bj~oWtf<VQVUn^f}bآ+x'lt-Q0S^gQoؚ4L) 7ayfo'_c&BN+5 NcU*aP%YVdl!T^5>[5'YlmO8gB^ VZ~)~l5ӧ&V{D {\ NoWil ! -R(a]h!l6`  :l8Zm9OwJYjd~._AL&J$ $x\A`1VerB [22hQ!1UyBaK6TMQ*z̄8"mWۏ%UȝXGTBs=6f.:c7#&܇-=dg9$b9~Jչ|H0KajpBR0o~bfPd U!YeU&AV^{,64JiΈkL9v\p%Ǻ]ldg KEBV dԒR#YxJ2w cvBl lA+OV̄ ȋODfݚUbsJ{ohQA hm UVԧSQ*ZjRgdc-rL}R%UкS~&Ja&ʜ &R hќAKNNEUfR.Vdh¦l%i$y >$+:HfM"xjӳ@op'-XSK܄Z"m Wjx%c?] :oE'4SZYcEDEɛIb#IB`s< 胣w@|CJkQEe''' RuK%yD=H/NA8u:CQQgdF$5u3ͳA Ykw̲o+PifN *lNM4ZR=AV$67>lhNBDk@e0+CZdQ7DP*c⍅2=8yH~Rc6MRm>1? ILyE/+&>2I W BL4>O6uX݉- F+UZ5L=ogwٜ`3;ƗWGv1^lhRѮ .iʦ댰2ޗTl >uzE'Qfa~#|جA@9o3>bN1ۭnNIBT󷅈+1(m!Dn bjEpN@ nzN'&fYC8D$5!D4d-$_1Ddfl^7bæzo Vw[Z={i5L11"#Ȇ1ٲcFJBlPIdB~WFʺFHDsd2eL7@22)7##ş^qM\/g3 xx7u$k 2얛N|&Pvv2ذc8+71n:S iap\ \).!-ůiJHC`e Zj#3ohbpX.!bk b6@0[m1kKk&bw!GL;.c'e ;Bnjo;'1[q\ 1?eq<#e=]yFxu6A:ݢx/amԵ=K1p.둈ܳL"@!hZś(>^jgv&p}9 R1 klGOȧb"SERW6 <.YEd:堩Tp#=.Xv/C}iXw/?0Neyf %N K"x3mlY#L:vŋM"ݪQgi]U-lT.}YM]04"Ͻ\Ms乷4,JnDӦd!-F'//v>p-7{B6ahZ~QVu,,}3ĘvaS6kE(PYYdnϐF~m9{j&nJrm4~-l!l:.tj]vk0/6,yN$;$^!DoM$,棧]:QFy>ȾErd0.ؠԑ4mAS\ɺ Z4t4Y6X,'W 9R̴G} eNۖ5~+"?YPP 6?tABB}pz>>p*uB}9jSk>"KL&aܨdT0.iXKؐ۞vL6`r3sag Y}y/=µxI/>O`h*īԬp%аwKQ ǔ؂hnPED$+="GUڙ nv@$彤EA(smﴅ ޶4:'8E(: J'mzB(e"9qŹn=F`2H,1'F竤k0M`Rs0$ `7hUX҅@$Ѕ'b>foo/o2N ؉X:` xj_PiTlpHS$䝖ip({!*2)7GctӘ4HIQYމӔMǘ\o*LZ_e}2ePm!QwEb.1GHWb\+vjKYΊ ҟ 1s]X;ɜ~+Ϻ <l ^P(4唷Z/o(8NrHpe{X#$hSR Y .-N*އ -UmB ؐj@Ru0L >L!\p_hiAsBb]xH4uNF|JgE:$D& ԁZ$g^Ib#ݽh[L#0eǘbƀ x1ӵ1#.A2 ?u'BFN -@5YLA@e/PY%홎XfN:b9pD PflVjءx=*#J0(Rd2E!0ڒ5$'D6|Xz++.Q΁ DbATCP¶OTf!`shdy͈L7TjdI\*&ܩ6`c)Y lnS Vm{1*XdL4R$ew2eC)\9+]GkrI|lTS5"6} ap=MBxr9ۍB$rp+7#k{?r x*s#IX 8E0ܢ+ PaNd;+ Z(dpS E5 bˆ8Bb \0jM^777;Bn޼Nǀvǂ%ܪm7ǵRs^6 l@a"?8l~/ ^3ڕjS"%iA2tꠝNEH.I~H$cj 19 EM,c7Sj3P%5Y1^EN*P> .?Q.Ù~̳iZ2~`k {G!yC4b3nO;"7Z"uPAVprYt-Tx6"Mu*4gpp0 MTIӪJ]8h ${N gB@[e ʀ货Cњ;TctނZxn%i۽emp&֡ڡDpA=A y<`r e&g!6)6eLDyd؄^~k8w 6͠i:0>kUOJ[y?^4ښml@T&:%9hHCؠ6Yzd-Ⱥ mT3%z{Zi'1 #n|dȪ ?Yi:1}aH#$fc$P(pd7@Y<MX{esMHGQaws:CQ yAe!5[3B@X EQ`?>}GN*m(M@ 0CdU5nfh)(th 氍X^@n6"d#5$NccDCE/9xל҂86 *܆-sJZXF&ϠK?8)h؀2gw|" 1i:uII($wAs>6Ò1,ӢnSS1$V毷 \Wx:t$ŋ gjOrCl34 x\bfbf$u'$8a3`gqV'?l}2qݪPUYTeC) g; /Z;آ ,ѐ,l.!49]udy>jPP+-.CC1R3 ><c0$ 2?==|vV nc 5|12d ھ()Χ~!uUieP*u(9:lV)5,ڪ$S*M  *P5Mi2laXAKg{Ū]h2E[X\Jʅ.m.\j͑FsTڟƌ,T[%uk fKTc==ܝ 6@a^/bj S>;X`K@GzAJtPp *]9֐r73k2H]Q7‰=HT]L[LOc) P{[ @Ӌ$S UcDj SX7-zigRY(9$:"/1 N3bHSJ]h _35tQlf(6^B|Y_Rvv9,s]lخ~c/GVDl4Uh@ݔ  0 hC,D]:?I|viv"Y!tL&^++s_Jw8bZU4N1^g+ʎzːr]HRƘl9(e!~q4Bmk7ki4H ̻k4deddP3ovzRe*for'J  Żp|7Ͽ=?9|~3nxpXa9`T;I6ZRoH#3'LD&afRhm0ATan4`qڇ;igYՖ+]]?k2z 0pk <Lⷭi5b=`P$9ji'XE-]o}wOo>?};7>Ujy 7W:%%YX@#~r-Z;_ںѫ|[(:.+Β/m$w6'fzgwbRE~Q%o^];U_t0EbTO5f$3I49B$'DIiRFf;UTGXu6seHLyIMH+ٙnr'!!S_d%n7YmC5mEǡTl^h &ưÆۙe5g:۩Ԯt1e+.p FRUb ;zj. U@3)' .e\E r Cx63|3ݟo+(Z/^r,U%T? *%m&RJIVâଌQ^Ue_ZUq>m&dqAY%j X)k*Izwm,;~})_Pj &vQjgZOދaQ 1X}wB3H+;gwgo ¿lm g@v: 2a8eČ GOlt(@gA%4[ uxfѯC9h4p@wN|*Wf\o/HD!tGUё'c2+1dÏJ:gy!~&l6m** K9$2l i^pIVh(I1'MN?dl@Lx៬Jҁ "ϨHNguWdժMAf4_]KAVA-9JZrVٙ&LP\u>b1//V'އ>ǧO{"?$kE! I6R@Yo/BI9KKi6bhVE!KnVAi& l} XP%GD[jFJNH9o؞g,x^a#L8 hUݼ ٌ5 ۓa1,!{F{Mf+j0g{15£2Ul -pl5ZmFY^B: sfzU*2(3 \b='㸛ʣ>"D=7kȟq5$^_ӏo-@sg]{͓ZQLuj.o zZQCf!)$iY[]TxHm۟k&@qu)goJ-MV)YV3yNzy~oH" XrHi>7Zs~Y4 xWu紇۾r%#S-ԬNqՃҦӧYꮳ>ն&1vXlnB)CիW;/i+(.SWv;hIj;e$ ~f/4]2Q +?8E|QJȸȟqQ={+ޅ[/Vs[Xe0GЅ_ȮgM>q%b6Py2K-R 8#Hcgbb wH`n0\W'4aA!6SFD/ffȞ}NπV=Zvhgrh<9`'w.\e)c8T]qde>qXtOi&{6QwDoژ&#\tͺ0suWH)4͆tC:Nj(sKcJ1:V?ċr\m6)=IeSY:Rvr50B) IVbc#$bh׃Tn6 J']Fd!o(>R ;[>=zW=0pyqwxt2)w̹VO}f-aS[- QmO/lFH"@ ]J᠌ ,M4Kh[bbyh҂`v{qp~5C)i}K+Y{Ǩrs7-%7/y?]tO_/w|>?O[;txr~˿|nw7%8$14KK[dpmkbrhzWYUJ6osÖe>š `%B5[/V>ɺ[껽ÞԇMۣ)ϥY.=&[ ?&GDC/%_ihRg3byiF=1(TfOR|-%|mզB!3E̺7uq'Yʬ0o?%3 4XKvp=ARBa0)w LΒ%3S Md0F8'/h%[.j "Q@<>|J&َ&Olr<O)S<}=murAf> )9:z@0GR$/qe-l}D@~VTl_m,7q*ގN,4]]Y<՜kaIkI[g;$ JZJOqJk1;.jAQ\P`sʭ/rzP`B:z¼F,8;9Ŧkˌ.6Ϧctͺ-)86z2" WHPp':*]6TPm:d}j@ )tBʴXXFػQ̥et]z.}*:h/gXwAj)~uzڼ]nUL"c_rP,c-:c\㦕,8VWo8хN4IwU#?s?y|PfUx_it3'f9IB07iƊW{o;sљ3tx[d^k 8%y$pJv=uڧ? N](:W; ND+ ƐP_'I㖚C-vܻ/Qc/0rm*)QS]w:49JsK1ֻ,ZVd\9%hn; kTE5 9jl25;W| aȫL86d#&*WpR"(/&$}cDƁ,l26g:]n^!]\Pc<> .+}ݣLsnLg1oOB?~#;} ɲ_POҝx珩:#ULK jlW5C $XRCi ^Xײ5/ %cE,V .~ĽFm*WDFTMU%F 5-/W!"xv'3>yDztJwMt+< $J+!3$NG|^0qswm5>Df=v4#0G<7໣x;ݏf{߿vz43i}xP';J[2 y`Y8-*<!ޏ2RaE7)1>L\ׯ`nFH0׆rHxH~> Mw/?}6vNY<{}\@ӳF>F<~ڸgؖ`?%fG(C fmoFc,l.wbۧq+"~.sYh* wܒ7ˋ%fH! >ƺhAGw R[ƈ~yypJt*uAM+ӂ>|7oo r^+oA_7ŠNH,ьGWA9D-2ċ@ѹ!hȣ$doWR]Ns`e o4S-H=eYQ¾ ^eͷP V|7᚞nA6q,2R(NrB.ǭ`-)qr:)fG¡3!2D/Isy0EJl{Yy65+AJRaemZh_^m[ }D-їъ%Nvq'-}atdtžgj׈lt˟?v̩tbH gW a%ǯy KڜnU5ڽdX+Z`䇠nϥzr#ZBԸҌq6xtQ㚓i3Pb)LQ:FJJF*~OyeDO ~ۼ[Up[m_>R#* 1VUynjE]aAN#;}OPniͬ@|6|fg gx%~GP m(2"Lg0|mJCf,OQA91)}k@eӸhɟ7}ou xJ]I]ETSpBkie\zW%G*h8! :*H(¨'X%!%XוJ\WzL#yfes_amRPʼj˫fjh<,L\ut~ʟqQƽoGwnO=-*)0: 5ƋDP.66LNwI?M;UXLopNEkI)$Gz;BQOjC wd72! 1P;EH0Fzz8mNZ-H% : ')g6AWl jME"uGTn}w%Ш6e4YۼYآnnvKe}})~C ޅW΁!8G2FS8FڽVe+me~D荟Mىۄ"n$`>':ϸ(t2ɸE`qJbW 8swY+E#y5,SgJ8GD Dׇ2?[tܙuA[[ l4G۳  |Z L/lA~t!hptmG{~AG Ssחx5 iŕ,j{L{36lS; s褟PU`mJ w*_߿Kv} 888r;Y":kjml˜^{7IWJB9%+=h.U+ Njq}/Q!OI;W1tCW1t7n[pUF':N]]u}A$|t CJНpHhjkb[)` jUVX/NȪе˺ٹCo 9 H[7$Q*DTmA?GÌܫ^OTېs3^XCc\>,_r;IQ˦ڟ@EEwXxxFY=G;弦t_3>i~!$ז67}7k6?[DBIVs$+*oV^ âra)pzF?Dc@h03Hb''9 5QRGBX91 ݎv T=}B_.n=#~*ݧE#piۃ̑~'Si&8޽ CWQ)&0aYAV Ra/v; .=_I}Ch+l#~]mq Ɋq!I`цIBT# >S' #H^;x1X |* y6@Bᨬ(LjB+Tet>Zj LPNw v<5A?|mj,\ ֪hí;v =TY (JhG-!D5npt\~f2CVjrQu/~6P-m`W~K7e]T=u{9 SM٘ė`:7ZlžT<#UȊ]?uY q1xpfzeNI z~}~c=۶(29B)aFs۩rBw3 ]Zԥy 3ڍ>L bU %wHp_$4]&& ttq?S #}0{m-gγıMkZ!QjkrmwMX??MՅf(S(-Ty%-=XiC2X}OKiɞ صՉ to[)K5B\e!~qDx*_dmIpfE1UJTm="_vlבdmf=q>rQ8кs\2;dt:$ g^K%*WMgt1zH}AR<(b/S/- ӫ\5$[oy=g*}N|}]ݽ١S󥄏^rR `|FrFlcp/8s|nLK(o/vMYӭ7HRDzG'7MXtᇫ'Y6o7_B*M;.ǂ~{B)9CAi[n0owFI9¶s#C$3ێFᑹC͔YB)bn^QX' J6!cE0A^&u 5šSFU2.~dL `c4R.><\WTIkEIOVQWk%]-$]urc5DљuxOR퓷^!$'Ӣd}fhSt:R*K}D>\e޿mMHFrs"vn5:SsmK$3EC!HY&%bPR^.Y\ wY Hɟj"jo׷3RHp-a\wj)~u4l pyAV ӃFAN{)Е7e㳫?0T9)TMcIf&,JW3v]2x?Z/G߶E8!%qUD&/ouG-[W7[eӛf\U_p[%TsUQJ 4P Z]A,k+s|õ\!̸ƮS7LN]B@/$̖%nG~oQ#z ZIWEy05\6NH 0UiHZ]n.$9 .ETh`O۬3jQ# 6]+ xq[2~7/zh\Њ'Z&Q:S@\Oe'-ugεMt *',YP5:Л]>Aӛ#K~/jHiw"A).#_9[t"CdbJQl✋3p06\71L?<2bBpZ^_׹lj. *z5^x *,#p#Yg!G BF^8.U4BC*Z&繻}"5M㘳clY]JN7Ќ pCA 3m;"O,%pCUG99U m u] W.rsSRdd>2U6k=g\ \5 0 04SO pePVVxR͘kHc51z+7RY8 hrxf{#uG-}:jtމu-7aM.ݥ#9Zs)34LI/dNZJprz;Y{v8{|t=k"tl)f2Fin_OO|?~}??y@SuGlK): 9: \Yп?/_}ڸszq*a|ߝ?[洛TY:6U񹓁ӂ@`ULId!I^m_y>P44i&ѯxt#6aJWP1BpLwa_u1n1$=̧- aX¸U)fSJ>&̆|{ɵhNX?9AO/BX[pTeXn?1"4_h 4_t#6jEQ,g$Jz_'[)nU+ xzRA-kBVqF~e DDWVeQnab^SH #ʩ,H21ڶVEU=M 2C^hyt v6JDw|ɒe7z>~*81:qip*0)+y\-Iu> ź[L<]e3X YWg\}T5>ܬ,<;M?ލ={F\*YF=B6dsgt-Ru[5+_u, ܤKGԒij KI?q8}ՌmHtnF8;MH%+{ =zfRocw,3kjKԃr zE`P("Z+X\krBmzbA{1sleu)Ӫ h5J`8iu0SS=nq+-r3[1^:yי^N{igU\֫4czp/Ua1Ӧa3sيh㻏5GEK\Gfou7$tbĽf\M$_93AڶRxrԴV4~6/cRF.o-? G(`glM-LUs-'0!2rt 44tAC4L⿁60=9:Zg\}) ;BM*=:y>Lo}JT$0n`'yA^yŕiXs0goH' SɂN㵸 +EǷ\M9H3t;5 B5Gl(ڶt'&bj3Bk?ִB*LcZX}f\K&q?D5CyfNi;WFu*J{ƬS(/uhyڔZ2ԒyOh*SDݚnU݂Aj{N ,Z՗=`G c1.l|/W5 ,_W5RA\F.mW[гw;6mx0 oȨjgKfxVpB~RyFan)LU)tsG+=YcA8\;~_'RXv窷EETNIYN|hB舀v` 3뤝*h ]8)KSJ]~bD&"z˃ZM1Z__x'*1nR2L,| =G1ln]bvg4i.gIM*7ܔr{Ec6wUe Hoݏqdlκys#>,tg\u Ojۧ8l4MSEv%A=V旗9PcZQy" cUx`Y~_ Vƅetmz?F%hj ~`cyS,?iGּN'R)*Xkin؍ی14*D¬R=vLD!(#NrI,G?hAZ('):}orQ:C/]5J]z^d,3X6޾UKt)& l ēhvFn| JW(b4˗|Q*Ubդ62F@a p޶qo}|çw{+ϏOϟY4{\wͦx뇻6,Y{y4Oa/9tۿŷʛf;6^<0-p/-.>{^z"s'XrQ yg=ݸO?Jid)>)-'m7xBZLC(6R>XT_T_/[ l&U Q`8*NOL%"/f=aOs&L9`tӤ0`*@NJIaJ)boicBج726Mg9}Y|QȄGxl<❸*x|%OOv}25m6Ǩ˲P5ZI14( f[:T9=v~yy,0]??=qoŒDKc=pfsb S6(O5wlƼZfbU +Ju˦qƬ vزmDeS[35C+Έ @ןS9.g!ģRw SJߞ.v(7tL!ÉB,\sϞ38tgdIVu.^T gg{j!}Кg_+ѓ> !I'qoT$I^UPK~W=pvKٽ?⺾{M%BY9K`cFl!+96[[6?y4s0(\*iV+)u8utU @RvsK+R[pGOqu뇇yahdQ<~<~C[^#m=#|8K1s5PctM=P!y_O9/D>d!jW V_}&HE64P  Z ȷPܰƑ\%ή6::1#ķo<%jiǒ&BgE5Y,M񔐄dv31<6&  Sʧh&;t<K&yevlxłg/(r ."F \N<׿|U4{xHmC ̺@Y qe e%!UDW1>B w>FNEf6)L5HxN.ٌ%n:7#U'L/D?I~ӎa6hyb_31OЄ/j!Njߗ~v+M)TI&yUe6##C=kvP]7툷R)l"Ckֳ`0(v2xVȷԱkmWb)K[]@:4"&@ (W&#v䯍@^J kG]C#П-,55VF{*I!\*Y| xd71n-2lZxo(WyJ oU85 QPLM]80Xxt׌ae,A(26ᯰʓN锊ΦXMA~NZ2&2'5-t<9UOMo irʗwF?Ē/d& ̴f[3VT7L&ſ_G`\*_c04I!™oDid10_P`n* frSП>E ႛbFe|IjDϤFVCj Nn?3{ fP~n2Ϻ"/.~#6SvOϟc;3>*8އ뢱SG>- ZCbT01uTYbL%edė,ۗV5 a.?IokmU`F"ٷX߯kk*] +t<?>[$`ki'FZx joXAn-,_x:$ ֒l0Blsz4!J0𭃩QM*1a*9~1rJ1<]z:bK(x+I@Q8Vr-踊(B76x2ė9gl:ĻDpHWjVN )lˆ*phyTWͣfu{A#*FP'Eynm'z]W_s޿fc\Ybj +1h-^"*pC CxXѩQ"zЬ]18)5۱q3Zn0aPKOBgPd*&_]kUɩ 5C/hx7w^K0|;#2>jETUlS 4Oo{Ïo~HEt Wk|xOݹ֜q#'` ĠJ .YQutMv&[qbJ3wLiNVxʸc ZmLVayNA8Qc#{Jm;$#;WESʲ}T{=3PXtV&"TjY"gn``S7ج0ZwOo÷sDSNs=34$(,=o3ܧms; E ]ӶK ~7l#߶uSa)2Xw!,ůemع=MՈW *9x(zK):q@}@#)#;stij+X{Zi`m[ѰpWF& ٶ'a~#q7*~X2b+̧=7!lᢰǔ鸵YEclwW1R{i ^pygs]Df:KSJBs\E vst7Age,uT[ٺA.eEt5tBVjPfQ j|W8nd=S\KaId*4:f&6!-1M"})_ӣ<QuB%ʥF}z4"|3;!g9I-qmƛ ꊊ3=~|׏*u4??-x"e=#VwW|{hn|N🸲Ȉ# @z[8#`Go?\k,?o?$WSVe_-gy(cnhfTh @&ag.c!>[:ȿN*5f_yw0~MnD٨~1D OdU_ dE7p7~bD(qP%Y˘auNP=yI's2fnnrL0 ú Pk( K<5g3JuC5mkZ Wa ~COg칓]}!}vnQpݷ ;cHSKUvU*w`4{Z%vn_enp[kX  t`tjfG :|;QWR$?|X4-/Xton3w̦͆j6ၥDqNnV:8ݡMモ2jx:Q/KkMKvr&L~OVRM'^ ίV?.U=Wr+ 潰,/&EAV\% \VU^¦f"㗪9+y{!!a6pT=| /չz]t*q1JNM<kmb 4qo閴̬%ȽA=9ZgpG)큄vNg{MõS*֝T蔫dE!@igž._¡ '(_*Lz,O"H Qtд[+Df9D5RZT0jyuE>ZG TmG?ݱLQ]uu]ȴ*)35RfԚ~`APdĬLuER$?O3-b+\`1d®=7L^UooS:Cdd|WjAZ4EJ(F`^AAHKbj؀贪H2b՝-: rNJNNzwtt`ώ=)8{@,d%CB=l{iD ])OSĭE=U >Oh٫ Z ȾJLҙK#U:lJ9ɡXwR'qЈH$ze!XiMZb O.(Q}^'ym=yg;bbu cN/qQdAɨ%nxAF֒A `|/Fc5ckJͣ= G8Þ=W۞ݧoA=vA)Gw|eZ-|i&[BddI)Jو z;RWoY6M¤Yt*20ka^y?zܞ.^xG?=%Vꐟ#CY-I< [ :luBH1Xge8.zT D+fzی%ĥ hE{1USnq |x-bJ.k7b$azfLh/G0[}7D;ER %iuuBc.| H'PvEH+UF!oJw~~(+ƵT3h嵼dbv~Ƌ퓝"V,> }ۿrU*.LQS4TN?j9tJ9:Y̩ntBEstg( TO7xH3ǝ=%*T*En/d"\iPp+Zz(G4lCѦ6N{[XlTygB$]w |g*8HO'N$KPe1Bj`1jJą+R7s9*k>P_%dp!Hl :.|FnTXoϥV8W9|[՗/c9<#'.Z^Z4<0P* en5TVI2 gѨ2B= PZ~E3-JoNj`#D7+~T +KlË(oî`HL^aM}t*UΰHxMrҧ[7g`M, N~,%HvK2`+BQ;YU>M1֝.ta6[4ha\3q@te͟Q|d#j)-+bص!Ma>헉"V16=b}=OQt}d鑧YFmv."}jF-r1JՂ:^'+`&fmU*ҤsYJ+E:"/Ŋ^C)-lSp̱\a% -+Y̭#B,4̿=L\BVUKoN5իVc#Ea Xγ?P nUpd WTuCX}5{7x,ףEQa {f;.$w]0T>f,Eնë5V!Ӭxl Vե:OCDyGzӨPb%JET GUS$rڏَGtc^Gˡv<|SďJ,~I׋+$, Vv'Hq[XNT?Goat|ZRFj>H6v;vbV9BC\BP %Vg wA=ЏTA-vl濛k6.D O-J.…e.Ǩ>>Og9GVsP48RNsJ5ި CZ-4ۘ5zG2zaԌl,jd}AP0WF( yFv6bS𰬨TrG(Ǿ2uf6i12OJnQh(t8#a>Csc MuH̼զc;mT@nGBh F [d 0uJfu0(D&6Ԭ=vzG] S픉ӥ4cG1HiP&.(/}o 'Nm@JÙ{FBnp/=@msu 3x9#x Qt%ATiZ '*#tڑS4߰VL界`Wî0R ed:UIyjBLc<4"NJ-߶SF XA6 C]-5,Rvۺ!yXs3@qA.&9ُZeBZyߢΜ/o o* ?o=6+=g/  m$} I@ #I,K!:M ;I o2-0ΐ <:;2qdڀb4QXPium.}ݧD#SL4FJH)Iqʋ~m"m*1׳Kim.U@|"(Ij })YN;cM ˛.MS9.VK̇oO>Ja.\-}r)"CI|;!.o?=~{0w:<=|ө4!+ ^K?QhL +[T@^EgSʍ :Y#j^<-\-l*4q ֈ˗.Qę-JL2/-֠6˼5jyJ2/B3Ma7֋<| y 9T2!}AzfKaC[JI)T^x`B#cL$?Van~IK:ҴMn+}jQ{ntq#- YrCR@v9O34獁"VA;ฦQrʿN8;cت sF +EK7#J5y|Y{k^+_#V %|(?G1Qǎ$aQ)[bJbTM1ؕgB&S&wLʑ u\=Lg-B; ʝaĹ)NIl&% :VlPPEOȐŧ /5 z6q&B:>|)ͷ;{El{E+36S* kYzA;eR}ќV8yc\f7g94fuYO?|)ž󱦯#ZfGJ.[TU儤1u&SEK|>>z"38 ˜y"l{ m[ MA3ݢcV=2 s-lk&[;mx?,-YbGJ(l `ϴAK. I@q hɧ5"yt*:4hJ8|ݤbNJ} S NK$h{w#_$M R\XS<##S*,V "%d2=I0|PƬP)] SO-8"rIT|p+oIΎ6~ >Y"n%=LH; MH"4u:ClH[OXQ!^D\ʏEloa(k ;MJ;P~H2ʄIS=1kNǧ+ M#2BXkصgؽ|{*4zh K =KOlF ĉiڨx[# 9L+U[ M̈́"-m{ eTMVɉ^a‚6G '$?#" 5Ogl&b"} M'0_xgn=½a4NJ鱄{z+b,杕Pz(NIz~SB4$0i<&,Di1aAZ"8) ¬us#Ѱi`1JKbO/_>]{ε6tMs ϑͲdQ-eQnȴߣk~Dn57GGXP4b0Ӭ ! ?to_/4\A0F6Qzr>zDW ^Ű9_ķR_stH,ӈEr{ΖYP[e;!k/z\\[M_9,MWb~yz|AuFd۱4+>YK5 p V8Z_~ۛ_./?|s_o|{O譭]8FvھvdeHݳJU%ԯSp[53i,er Qrn$&[65H\5Hކ|9rU<{gFpj#qz#ݭ,Ϙڼ %m}&ƊTj k.:njd\^iljx: '4aϪq0. 3*!a^^!ɷʐ'G>q!uCgY 5p#<ݯcʪ>ڭ/weח.}5Jp  J1RPK'NLHytQ6=6#n!-V5VWmDOs*`³. L)3d:…l0ȎA֧, npH^76͘)U}n+N ;E[l4#$zY=zLM5Q'PA^肁hDFetyeەF~ M ΅"O>aaw__I嚫;7Z)qCz6wΔQ1o`ЗUu]%UEJJk]cveͿS/i)- 0QĴ9X(uQ2c*z M5Ro ?xTX(*95ZDb:,]i)  1p(L|+3K첺~!5z48g ߙux,@].Sbwx.Q#Q奫lJUYЈ;d*Ō 3:gpßTcg'N1-K8մڍi90 #hNRAg 鴉3J}e;(SJB[sҧL׽,6R 2PP0-\ѴikN Q!Hxk/.o{N}qo'gG_>=07[:]NuڨUQ4Mn쳬 jԗ$ c $_ARf8Xϭun#a_9ĥ|GcP9;h6 &nifofa+:os4gI3tbg5.Rcx#'&dtZUEMs*`P>q:D:wkĂ,j/Wa9aaѷE_Ւ9"F?޿Ra5Mmz3֦B^' 9nv- ϰ;XeNju7/CԆ!UHMԼP ͕bUt"(}!J9aj]n:u{byοҢpV6AGmjVY05aQ mF/aUy҈noDPG8fMpޒosD#'RLGX)P9]RC@kF[ Ȃj̴ cMC&8~XInhC&"|eΛ7hE?<[H7Ĩ{¡7j2Ug4??뷇LJ|_⪾9ac{g"++W]:$w#F4RRʇ"5XU|QND5UΣ|mrbDa{_.oq'ظb/8rU@,Kb6: k̕23W6"'1prc~ҍcEjd !ˑmD~dO-f |gXM qLoY GkUF3~p+՞{}d/`Ud/Ͽz6ҕ%B Dmi鲨is:%F?3Wp/g1h%ȋb"-_֧Q:|z HKD-Q_iْRKBbö`{.6b'p}6ҕvg)sҩssĆ2G8/suW.kF" ˽lK77eTƻ@=U64b?¡4i: Kj-oahlN0 x0J?ƌtgG [;:G\Ugqsۑ9R_N]NLF 6y1JSڐSs 10,rpU\ąֆB dH2Rip18`Ia̰^:f۝cF<ﲱ`Զ+Q7Ce|+)k޽y*v|ăRiFKˊV&b!!)eTh}_v\NL@jtPF82=ha?rC",\ŪH5-I_hsD`:+le du"T&TSз_}}]\pukeٲ#)~uPaniܳ]vBV֘*r9J8Ȑ,$ͽ3-IrFZǬIQZrA;\ zH劦lYB[p#|.p]PQkHhqnLwQW;澻@l&^Pq*qmŷ X_!!D [&HK>Ƨ.gZ,gؽ+Fx *;46i|!&jś D-+)G V6_ cN[Qrq<(7ƼASzF]{m _،F&8ww 9cqg-JhvE8x:;rzL̈2Lt3ƶ E~.x7H\IKLQx&,lEvq_idռn!V%lњ]hZE(N<{gؽb{P*sF; F16}~a SS! 03 wr)o pZz>@, :m w$N"|9eb)?L9VjuRGZxe=væ6?aa6[8ve5htvCiWI~K;Y!:5>2Ua0++-}DckdqOVm%~5ڃOl\|myzgtךdHo\$IJVdxCmUHuwA5%CeFLga dڸCR0נdIJ4A2/am9YkbsMJH𝽈ve`ޚVn w v=;j9Nq1PodtG78閷>SKA'u@b]x1\#UX!^­^ՍrhLX38jf0\s^XB< 1pDvI@џAS7n-: R&y1{ gTyn),"UvPțz2-M"kBpdCOW Dm@ǁh!@b\{<~Q6-0!g2 Yx HfɀNπ)e>9m5fu9m3\l?|?b3>!Z^h^|^R\-ws!E55Q{ɔφ:8ٵLCΧZl>QD)mGteu )pO/=|M?\y2R܆܇LJ|yќVXʜdx(g#㚾_eeW1#<11㓔'4ѼYy(浆XIςO;x0}*Ek O`=nw`kJxv^TV:_iu^X.Ӊ=ł)%ݎb?OJk[`x&(*|ˑ%Nޢ$F:.{fLn>sfZsmg^yh~aɾՍhn`XBpUƃ}l¡S==F9j!ժ",}*XYsT<)I?d磾cgqY&7:FMxFiIZRLxXTGT_͓G쐍iiG/竤o>a^ѰM -Z\4 T&2- s~S6yS, )>}ю疔N~Rbnj+=쵰}A1c$$hd$#'u>ӧ#<ۦfkII`fJEbسwNO«dH9a9L)4V,9ž``hegb&ˢ4.3<N1ܢqJMcҪ+3c_}m-4a!$ kO=|@w'`zBwv,tUo>? 5؇7({/=ԁÇp]wsEAD$1X4=PnĠ3qɌ˛C711SB5NTQI  v%~ %(Z#_FMciG6Z& j ٱPb7kxϕeصZa#kNI7jnwb`3YJf/JrOalE Ldk5Bj,H4!P%c jJqDo"x¬zSzGmViqX3(Πw>f t#o w3tUBz/tkI(ϩ؅!ܠ )`#ĥ%eP`:6̛[{I(/ZiQ KWlC{N苯bj4T8At9ܥVY;\0/fE: $ ÊRGBT/*O59!XyMؤiP;YhfJ}翇>e>YptCvQ gG; G<U(̡it^\W 4D|9'D$I>Qd@{)F0\۹s-{O}|ݺ~7goRqpSaϞp^9}͚|{0ow__]zN"Wӫf'x*p#$42QX/TةMi(@[w"n-]5[ 5,B>jn^EbaiY o'F?h^MRgX (??) \!ck<7rir69 ft7\*\> k є;hzGv'k88{f{,&D]zSi(J4F&$0CtyXr/v'!Z Lp"XV&&(N$AUO]/~C'TDyxQ媜ULq%).7OPl= zGt Gk Ns ι5ggؽ"N'RV_~V-?VYQO-2Nhg9l|\:E*C- ]{Δ6=o^p:)򧏱5atQI`S*H֞һ _xګ+rHM]kQ5!o 50\؂j33!;.e HqsѕQv¢0aϐr$M#FPA(-hM)Iy tAW8+/@])>' r:2ͳpy2Ż 5\턃% Y܌(L^@vvjZط9 36v'7%:)+WH1DQCKftLĜU_>=dP¥O9>NA큲A,uছo K,x'Yld9ɚE.'n<îq<߶r~o_ '~lRW,[C+ԙ/2UMNd@Zњ1?WM̢Yt^UkX#\uJ7&MU*&GJ},sa#ۊNR69I9ɟx{@x> uakX'+F>OD>, 0e9 Z|9H=E6=D2Mއd[fEI+ؙC;@ru7l~ ª5TXۗXŶpvoϜXlî=wglm6Z o1ZƟeGY&d{oh'b ѝcRAbwy`ja xM b0֟0etڅYD%xkGGL&Ckس,|i;UZ͸Y3{é{x*`[_M1{ 4Az;[:l1XdXH4!KE$[7҆: 'F##~q1,d6j8  0&5:OQ^Ya?\sxفË3x4nԨ[QQFEzjзc/ *8׍iiy"jK@rzHq?L~Mġ_.)TJ8ZG/R '=ڇ^7V}%],^ W $U'(a2F #_@`(dUwaG?kz,7g׏,WBO $Si[X5$Xn*2ǫ:ЕmIlV,`sTǑ%m~El[F<4e[RBZ=5J-̊J±f-juIf4ZךPLJRS|i&MoF rkv^ ^ͩzF?}TX@뵥Zl4˺2rsX /bAM9%褘ϽYuWA%qKB; UZ].; r. 2i-ZQԧT\XACt"u$ $G$ʶ@1MN;/7(YF- gq#6<''qWm =QrXV=fb0`zdOub#ftxY5+gF~'`U3PAH;S0~9 wCwj:N$ s4aC xF &/f˹r2+' xsI˺PǼΖ_][۰AjUʌHkVvٺvQ3sS'LّtwXv3\hz˃y7?0 uYuXr<t1(a+z5?^0'? ^Ά }XƸ4ʻOJCdߩ5 ̡=G_y(\^^]_5祋ƃEQ@^=}}T?>}px5y`%‡`,9Y̰e%/_O_~wỴC3(ѷjj]XCf"є@LCa(8 N[!d_9K @!̎KPϐt:X>@I'Fu K00),Bae7T/cwvX Jhϖ G -@Fi B2p8&rFl;UO19%b°c>05 ,`Jqȿ+A.)tù_mX}N#bzsu}վDjgm潉p+TMXz%"qzyV[F L~{Wo׷m^} =!׉C3 I! "1LBV9p6&w65BdZY혡b( alªRĎ. R(t`xm LekfI&:tb'DLi9LGq$>ND8!h MH-tK =v΄ [,>> YN/B&<:Nc;S#K2 vaYd[He]TZ]팴(:0k&D:?v"UoC mmrb;ۿHؠ"p~˜{cqXe^®F8p"o/b+h+'"إ+a][icR.](AeUWjF8O1ObŤ]ug/JhJ\6$Qzzk3g^r.t?>M&E7|]gm?AC8߈goY3~u*})=΁2;R2EPQ+VH_Z.FUWDn)X-;a&ھLj߅ X&ƌ h&FLv6=jg3Zkر7Zϰ3X}}O׷7\_~ן6xxe'#R],+i+H,U4x%U:)dҾmqu"v >"h:tSnkaxݷFѸMfF0)epkϙF8ٲ1!U}m.BůTepc+tuae=c$l Z"u{A|GFOCD+ UB>f†߅%{&S pg$ i-BH}3&[L23BI}S0[aXpxR=9{熁%CmzI7I=ÝqWKǥH~cY ^%D()- Ud8v.8 >#AX8s@ŕd"un̾tn%ّ)uB4bT6cGRS`{ vr^?wOW4Ak`]\@Iq5sհfL+bpO}ӛ]eu3:0焰d8I'pl#*އS2+%00Ո~7}^Z3π޳`rt=q/=|Z ך@+\xĜ`Z'wѮ7Iз@pߜ\hw> U4+!-t|.HQ!x%,F!Ob@ƚNxw/[ S3BSM{ֵ~Ӵ$߿t2Qt"@E0nC{} ( UN?~yDzOw__]{{êMNvP c'yAk7D)\Zѫ>ZΓ.JU'K S Rf(LʊKaRIck&I;fZϩ&Sl- 0l×Z֗? wҙ^"]gԨr͸ms95yTN3궖00۵s[4O澮7׭UذF4bk˯d±Lͩnm<)09P' {*]le&-3۝6Ԭ75^Y* K CJ,CuYlL4D>NIbiI%e:gQfaS,MBc"n秏dkO_Jb&/=e*=egШ+Lp-57~AdᦆFF:?UMYWE=|"QgK$SL$jo P#"2yQhC s}}sS֑G?'QqBMfDDžZm}$]WHNu[a6_.Nb+lxm[wۖ|dK]O飐+\2L2d@ 5ȋ(ģ&G~H!̅L$@&f|t\QHJ\'>( XrgN0j_}f%ʩհ2;SxWh(t|z&]֨1N+FHeD_D #]єhՊIL4h:},\IJHS٬ 2T>[׉ɛdF_Y+5 GGg_N+s)E+%!gR[,[ r҆_TX t1CKĭk~%)Tg0"t`.,ΪmL*4uN?2S"ľC&eLKd#zf!21:q+oY ?8$78g 2! ^z*p[4"`DNHLQ,抐:jc: WølDLb;ʏiGG A(fl4hiv5$X>`i+ܶkT@!+b.|dGD4`ȋZXU2 0+bQè?&8OfqdUyXe{lVU҄Y;mCq>ɤ*y\]\-ZԩtQF ꒢9$`K;F">axiz8r0g$Gk*5 [~&qXl3IX]B S"؄ ^JoU׹  $D%[DNRb'vr:V+/GkP7H %M(F8ӵ8#˟Ey<ˌtub|ꩥ C)D5i(9A7 UlW( 2>Z 5ȳ@ztaI&t5X8Gkϟa%.U_,Z`D_Kur U\eiƯ7\ ]JKb=-f< 1Di- ,L7 GkJrr޲pv]Mm._^î=B ^ZyL S6/Ni\'z ?Q||~qu$A|qDPn=,EYH)9<CJI%<8F ww~z+2 B ^E_ fE4Vd2#7D\A?Vصʹa#+J| YEDJ _oye7bs-0&=>HK&bmq"IJE 3q`9Lٿ(x'6 v=uyG+{l+Zj5 >҉a#K/v% v'KE~YNF\; s%vd0z"ui\ 07Wv-#q+ޣwBoPqB7|P ZQk` +7lhRon-2%x|s4rO-]T%q:P7c >Phvdl <` 擘D$0M&A{Xz$m;J-EzNfUx.ibzdϰIhibdϖ_jCDϟBcrvW.e㛹O TWKZy[lv'cc ΒMT4PhOR"Or`%, [%hXtBS}CJcYw߱ $? NH5ւdr# /ӵF <,u2n-ĊCmGU)uxay+Y` gm˟*9V[‹ԗZ A䕜Ss/v +ː!f _u! ڈ6j)=R4;%*%S 6+Rc;,ѧ$*ψY{1ddYE"TH2Tg&N& UTre$N;DLl0(w&+J0al`VP,(T6rAc]ȗog*l=93؇;@@*Y!%򒷷6ZϴomSu0LIY*G wU{gѡ$ܖi9upI죯ʷP+3a)3M"\,=":ˡkäjr.[ȕh-~ 8Zp-+܇]{.6R{% Rx2txR\ }8LrZop_Jj۫}bb>7t꠫0穙YdG**<+-鲂VG[tg#% ?ӎ  SFzS2:V>3JsII~xsl8Ey&g%ER_)ʔٟˏD8?ȕ4nR{ QӓYTaU| ;V2J\e>|I ZnI=RDŹe2rnN_Չ Y bѻ'Ѩ">K K\l1,qJnLJ%\ fe3pkʺ^ڧ+Dx/h4e_Ľ7ᕃ),YFCnb{bqصwϰ{/@cU{=f\dWbAKS$eS\dN&%9^U qa̪L4VX%Vȫoz^˱q􍳝\2iOE7264a"5XRXҿ`M7 ェ]y|4/+@+9ʗ&GWPI+B#Dâ; zV :J*c!$~g2X<1M4QP^opl!)&VvA4,ԳUygm?ELu(TM,z12Hg}A(9rN-QwnMKJ:鰴,G*ӴsdIH/^F4mK?"aЇ={VFT5M\&//9n݂BêgzXFx8wTJM5wyȥ9yM^?Ơd@ Ve޸(`iƐ*j2nyrvUkþhay+6j٨nS _65̂=C=7 )fѹ ͨu@j1 ̘"&\!*dw!ZJfE /޸ml^BJf,9΁;bMn/;*8a;O7ʼȴn *w_h@Yu1е[ku,BΕPZʺV֩tRxƚ5s$Z4in,y~A&egؽZ 8pാY,tJR3ڵJ'kU6 iNrT#\1ܐ3r".sBʈO즳XVfd|Mi>C|{ONhƔ1G9*7Q9o >}0xM8,<a66Y{c¥%oS{nLjZLբ"эz-'U+tĬ׉_nkF bClt أ2׍h$ܐRƥ WUK\cK_sO=|03;%nЉӫ 4vGډ 9]SX} +Sg3#$JMV'ܵ6ކLes̨T'+[7Fo"K`>R%ތm)R$[uWkRoS֪({s<`žc<)s&N]Q_?pP"ğ Nர? XcQ `@{f"Q!~;%:Tf tG {vRʍ0!(F)ǰcI7*} rB Ed*>)nvU S#+y{ۙx3Ege%zǷ1{dY_faq`TR{¾*["|,S7sǴa}e")Id; eKYQVvJ_0#h1F$+$P&lyrC`luRte,eE/_>+ E[P[&VeG;,9Hh8LJv)U`;"MB ЄsIPlv_CàѓQTus 63KCZ}sM%`gdMDfoܸkص7Rϰ{/8;AԍMFq}$z|W#zLnj2H#9j(]@C];: q&;~JqMYǯ,.c\ EMLQ@e5~C( OqI"g윁)4YBRJ?xФOoe7 '딊ُBcص֊a#{b[4UP<_.'W (展]R˓V0QzSlY#H/'SX/ Z-1꾲Cr>% /quy\ў뛸&m.*S4HGS;k8U92-TwiL+܁&a+ASQR7$O<|+,J=;N`C2mY+Vmu|I1أB$FK ʇAgaCcP H{ϏQ<^lܽmlQNh啇=o GY7uK|Fm/L<]obz]u ]#|i" Tj:aԙ7l d+`\Ҝ @JpWk& s$BT;Ob3 0/9~a$:G*lΉ沼~A*߬7O/y&?IeUm.יMRՕJϖW}ZųĄ&"6W_f ^ȪNmHڹQ}]ybYM_P'OVFP\ ۼ>Ku\mq;x #/`ϛ%XEiռ33uOg?_}Étg!r!UYPܘ*ƵI62E Š)]h3쎦x ocU;mS]DK:f3lwԨs%ÿaY "b}dlF9+&WHdʋhXfY ^)O˴aE2݄&8f!Di6/45+VGqΎsfsPvSP? {(.bU6rC Nv=ۿ6NʻeXE9Og@sDiI{ #rI~ â=`+CbڣT^qy1M}ZL44?"YO]ܘRI(<ցyW9׋/9ҟ>ISmWT28yu$3EX1 t ´M\O \Q0p.ްsXp5ՄzMHtF$bّ(ZE% tlX\ G<WWWTgGU.)_.Yi4G>8UVˇ0 a;TZ ÷hjy$*`cy8pyX'oR6GٜkϥUF8Wڞ(ױ!,,i*aU-rt\OڑD} Mfd3[7 SUߕeN4m>ef^ " Ywdz쏑d,;Ya_]eY1F-*09/:K 4sx3)5#ˢ<.n&z:[S#[;Lbeakwb[K|`kڡ%Z" ctju[[gcd_}dggSQP\F1[ńVşinR&[L+ogulOncCG\gsw1]fhaֈdtkCtNZ]vN]GtaTYdJ* p:]`ٰRR]n{}6xlm|R/.m2WK!hFơj{3=ٝMݻ6Ǒقpm暺*\AT ݻ-j? &ؤ Hbr$o{DdDVed2${5]ɬ̬@x??X0:OJ^zyr$a^oT^DĹCf9OsF F3z K0pe ی!aiYoMma"%D|I?UmwKQ#KYFS}ۅ[Vh0="6*'3PxI4&jgR yA&[ZzRxY^ў2[%0pQ]#s~b~u~fC6@Y5N2"U锔SZX Ɵ<:{cb! Ù;|{$:3x&9:sG-*Z8H71&6LOh9;XFvTSĆ?0)B<[EBp˲:rst8 o5{K5$咝KյG0:O=ᘃj$)6=XʴGQ Lsה^ndhW +0;ADpqchShlF!#9ïP%.E'|IWm˽* ιeL\-0bJ\bj>V_!z{os8ڸ(wZ~N}gV|t찜'?B-%oTݟ1FOɢ ז}֫**si4mƔP3~2R^3,/tӡ5̰(yFͷ~0^ 4^_F KxnYL~G qnp^: 5v$l﷞j|gQY p#OJUm4Zs\YH(;=tm!{ۉym a MV}9!G!]܉Uo1t1kQ8MEV@<<.xhͰh>qpo(0egLf}Kwз!}b{.\&p=QKΏwÈyH=;ц6{_[<>箿=raEN^8B ~6;BX!^9B~$$99 7,7YB}~Ff9mtZg A<69Io垍˾ޯ!8R'w$ovG#w$,E ɫ䙵Axc/ 1mCS,*079G~ĩR &h dBS&_"FB#tv%.!ą>?Ө"zv*,BEa| cB_#e;. v*#0mz:?/?O7?%!) ϢvOإw!;Cmhq^u;ډ u 6-nsA<:PDlBvxz waӇЀt3Ǝ [p{팝eu>Z4T$p^+tƜY4+=|E}qџ)>׌2ᓅ:WI- /"Mlf&75sCX3+ [`mM]_ljZQUCJI'ɣ ֗d&+g􄕤vSoHStgI Nre%>}>}&ʄvZB Ɠ> ³JE{޷wœv_h3 JsjP@v pS  t(;8k$ [taI02ԪdJN䄏8 ;}Kv?fS>3#JXB))Bs>ollhsBza<+KMr'+P{FQTW!ZKD)#R3Ӿ-\Lx.ЎFE$s ;n_ EAς ʎy|0YP? @  ԭMwi;њҢAxj) )W ֹ'S rf#vVn䶟D״ ~'. '9BS\rV;= r6KyB],;uԡU\rpR"I4nç`!xtܒ!͠)vN9!t pי.&h}ڠzXr=pA2yyQU³pj{)Y] u !̙QgVC][d5i-_ kI]9ҸfQs-T5Ù8"xSq" x%q|`C+[W,?Tl̆KKyd1}{b"t<:; Qih $ ^Vu?sfvwV eg5M}5USHSٜ8u^Tc4~Ns qkUZyQ]䶦N(Oie9+a>!ҐC™?>|O6[ZpZOŕ]_kS$N'ռ4:Yw諜r\ 8" L x,Y/4 S7h0U5_H لpFG.&'qJq+'OCr# b,pԜUQ^D Ⱦ(I[Xue k6!=~{zݗǫC'™p÷%XB; Jd^h'#96( 6fMOoxgy}3x+N1O4{ 'ɢZI{F83HqP21^`9g mgTTݱw6"hj-J\K5Z ʐ|;x$Ĭ]iu\Vƚ5ABoSgum T5ù=G᭽|!Mϯ)ܤFeN<7'{wzf^A*X3ý?GW҃;46_FwwOF}{3Ǟ`bU c6'SrM#jei97]I!IWdJ9^=P9RiGKNC1G8>|HFe60DJ9 g8iLIj=fi>9ZQ1I#& I 8e= ;ͷU^a \(6Hx y^I kiv5n iӺ7Z慩3z::_*tdFm`,^8^7lE&{eC_jMJ'\260)^^lv9ka1F!-"+o[Y}E~x8E}>ӱO2%c]㯎c3p|u|"<;W!/n;W6ڽp qG[9 $ep5%x>OϤ^EkgdޥPl_.ܞ$p n( gZdu YCye;oA BRT96: J\D@p;B п2%7?>}+aYt5!ҿ VLLiUFJbYS{b;bݸeLb8!p=%€Vsٹ)v;m=ꡢ8ǤEUaIEHNP)X)Jh$0bhKj(`'PS 8;aA^/1M4 7k T@~QBeR3z8o"ҎMhmV٪~s:g:xKR#";[A(?eB4CM(ʪGAVM'xQ1`9dTJPk547߼/fr˷EnHƩHۓpX^0ޘ-1T~G/7n[mo۪|W-(֝ޱ3Q-żj>V? ' `NNSӯdXd66εK]ٖ|wQnAt\ σ:m*uruNE:9 ABau};;8$ѯtyM8©e|5z%kty8 9 RTbٷú<_f_s8g{N?ؕr!S(tou6?|x޿ =0 =ܘ[yKGPPrXKAB6s.}УS~ң3SgbHsl fm:Y`{k)žm.zpoaNE褃fSDh5V"9[mV oEl>Bs,HX]n}e%C].u2ifΠv8;'4;: $Zru#֎4k4E g8 z:+mDB)57JTvaL; TXNԧ{h.qj<4îA /0*q Y@$aG`ĽGdR+B"Z/Z_5{+b'yRKFҕlǯ:St@4D9ѻhc\:a97vPb@}5lA}!O)`K!Amh<#=q_)pp0Fp9FǰaWpvF*h >i 2FaU/qX+wk0(zI8`D%J. `V0vtˁ!0aa~""yUP>Y#ɱW0FJ*-Kz/Sfhk杙ւXZrNEVmhEMc[`X)S'Dʹn!acEX5F;)AdRjH@ĕx34V.ޘu%iA5@XaK&yg%@?>]%~"*z*%7WZ @ƅK<@@q0"E4mw$:s F-0D&$݂aVz@혎a#IRe^ɒܣŸq͔rPQ&J)1Ws8 YqHr?cM\;-N1S9;n9h rq+XTqm@w6paMF].;_+DW 7}(uB] sAS쇇tqڮ*]~ %6^^a:,|/c"0_0|'skGaXz/Ur \3KFś(C,bʪg a5|>L@6(J+6,EUVsZ|NHzIl{fg&A!u^hJzszwKheM뫴Wn %4eM!y׳ R Lƌ0jM_[j<* 8֌HK#oW}qk W*>hz`mr ʈ;B_6뽻}{q#@#XV Qi]p7T-|B,Axp=zm*3N{Si8r*'S8]hEnL-!mzH)f.5aDNcJ'=Np̔TEr8k!IK r{VNّb;ac/4_gþ]d8+Ho>y"NDCfTUq(0iM+Nu5ؘ'vQU4aeR܆#bgovck뤜&pjoϯLX?|C zIfdtmNti0+g3.AS9hh"dù8cVDkQhR˝Q"Upq 7yuKCa#qIpZ`=B,jt@Di!zXPh>*1|3 esO/ oܚ)`w{F\@grJ(lBdXp9LS ٙ_C,cp'0GÕs .~CAL:y= 8(%f\g lѓnĐ(l^F i*"J9VG# iJǡ˒N>*ylJAqPz32s`p.\z|d =V+]niMV~z $L䚀 :E@j ִJ)Q@+#L8`Tț!T  C>iњ=(\bx'2Hm4YZq( eZ1`i4H֣}X_"mp8ڈ wz>;ƊArk&PpJ̤rxv-\]Y5Bd͒ƚfAWmȰ( S ه4HG+ć'Dә(R Q%eRiW- ?^9n~__IӼ Xx`L Pg3mw8A#dbtBi6ฉKd38NO]br$H ;W)xvVp̃wcYD$Xv=j 71\>O`$f vN3y՘dNGaWd듶k뉡6Jai;' G,h7YvZYš!rJ͜YV9MN&1ZqfZqa|\2Qkf()34^ϛ9ƉZM34RUxP}餽'TN2Y4/dkoHLd|6(ZKhLz\W@San}xz闻w_>û[77oocGvΐaA3TBԐӬY}̵;%ܤJ_~ASAH*N|HC JhQK稇%ämY3?. .ùME#** =j^\~{5Xk>po=%vAO'MѤ]q LSऍ%:YTJW#AV Y0&/@WqGˌud5i~jU9Tn1n *#yVI>+d¯RMGQQHY,9$z\^P/լ kn7I0CS05 fIb٦YrU_%W;{u} 4C PI)M 'WTP4p@*^(7O&͓ȏӬ^Ks =i -Ű:ۏ! NtAx#bx]+"%9 >K])0t4$̑EҗͲsXZL=p8a߬3Q!كx>u9@b1M\@fRxoo}enntZ;Qxk<`ƖX4c 9 >==|x,Ǵ2ba[֠AP` \+G0'K0%\VXleQq],eѝ̡z3\MC3@#sBjrLT-V8S&:<(${֒CIX}P"Y1+`  /[1`Ս(Wx/?(^)Nrb]fyEF_$Dp*AVɈ9Ӱ<Lr\W_ Z;S3\w)޻W*ZiJcrCz$7T@O/r-Ϲ֮w󄘣SI'mK!0Cbs=!~`aO][T8,!)4a,s%&?pqFe %zS뢼D ;8`FׇZ ּ̊›w\89r\ ͰHcdD[_igFnG4*:]ΩI ;f2QYg,sEݸ3ء )mFfLj"6ۆj;5k{ 6]xIb?|xW+pk ̠)-y;M%V~.H#Rx:kwsy0Ua%N՝ω_UTZ%yxD|`VGb%,, F j`.֋'Չba^<`LM( P@ EѲbLzp uD,xE(̃OthhO=\D6+0O5 /Y4OWttx&Fgb;_)5-޳bnTz$kTBCt`bk{޷./fי৑t> TTp[-T=+zʬW׵'271Trel=ù=7G᭽n ⌳Y}s0w%ҵ!7S2K\4?*&=* Id0?&݂qs$K=gZ0jp;+4W0*Za՗o$ghԵ#nQw戺|h>i#r2mæX5/>bRk6ΎhAKd+2Tݺ!A 1H-A`@NwE8niqIE0~[ ^dRJs 2}xIM޷uHG m  B[>7NoҥXoo\~Z'MģHQer؀>rYd0xQfCV陙V80LW8\-{;85JaU3YzVcMaWVa87%#ND A0+盩-.'1§bfN{J~6,pNyNkGU̜2HyFHMTs`n8jiO̩zǼH~jhX}fIp24 :9XבY#v )niJU(+ -@mxo bQx+mH 6ǢHJت#|rdTN$_^mnȬuɚZN;2UyïBS^h˓f豔w6b7u*QHFZ %gL[?x2eB;*?$ع%i$ʢd;CYphGѐZ<RzzVn2_/55UpMZK5c+RN$SJ\J7vc!WxEN`HR޳ 97XbK,8a6OR`vi*$IEUGVT4kzaŀr FN et(|CG: 'IjNtڕFNSĦ,Kڤ ØE{^$6YvAm @ _齰Q[|pt( E6 Щ$r;|<$3*gMBoũ)a @]\(Eq0RWV4||"@LPd\vԘn s!kp7`>vwk ?RD?񞑏fԪ[RۄY[v"TaR,a__]ud lAx^'ژ n2[P~&v^ۻU݈Z_&q1s5 HyG>=#ɫʤ+qF+``ӕTfǺr$t*<@ky5Jɠ5t/żIY of#szXkX3{έK_6R7RS,*~>4mBntJP8b\]MR1+LKP.:R:~ C|S4U劧DMF#E-ˢ0F? 7Vo B;F%~^X;\jG*GÊ>%1n/&&Êh4"0͵oO?)#i1Dm FPjjKl;u'sgxՎ|LOO4n|( L>c~`B[ wQ~5Ӡ3"Kon|[H ; -cM[=xPtGV*oecSGKEܦtLAI-a\U}PTnOF[G=@$G0R_-mI˗0c̙0Uh`H]P1P1t&4gkȧRxB/:P?^6>A(g%U5(hwi _;YK핬];YU:EJRd6]jJDão\ ZS|v@cCĪRH}@m)%P{42.,!цpAGc`yXBɃ.H1;AVAx𯻓V+C\?}N>S1Ę/ ͣ64Ƣ:j˭(.ׂJ|VcZȱJkp\B'ϰgxcI%X*TK5C]KDc> F[FMYߎ;vTtل$%B{rgDR-ˍq#&.-޸/J)ϩl>MSRknPs\]' Q-/ 1G&F;RhD1Ł# ݗ2u0! ٝŴq>olXT9 n?ɺJqqzzʊ[4խ J}wиC= DiDviHPA[8/*kRdO)΄<ಟ{ObmcIdɄ S^8^ޫ ?&P(U^b(j%/^-*]`h2&SaDWQ1H' GjN)sT]ڶj >!Дk$٥-~J&X\? ;3GJz_ujCZ/FoX'G.ǀw\#\c~Ձ% .#9vuB}9:(kbqщvQv4>6 ʲ]Nv$ToY }J$l5JO> KΏV ΤFr`I9ǠZ[gK}Z@x*h1(숴SW)_{zA_pad˛6,VV6*ؓYP\~L6YN+:V *#bShۢDz]=TIFL%Bgvaw\ MK}iiaϩJd K><~gu9-}t L)_hhEޝWf@)Ӡ#Б-޿ k$%Qp_sbsF0VKAGuWE[AY1XI tNPn8o(aS,Tj0cml-_ֶq[IHQ353屛]E`ഡZ˧ӧpz>` BC,4Ayi[YlXp;*sut|1zӱW{Z ]1fz|uhC~a%wvC"uB)k.- (F;5Pv{}D46 µeϓ(lg՜NiFsY54L"5-*BƊ .q\C8kpzqd6ņUn)?6CY?*鎶JZ`Ggv(ʫUfh$Mn1d1D?V4AᑧUZDjRK'&aݗ??7-Zn`{$V`dZg=BӦgNPI"[Fqe*t$bQVlÈo{a9b+`|twQqP`; exgi:d̂ !#InP͎C".hx~ɊKiITs׸6"Zyn5qkvfޮ9۫U3ʔܞg#`BIQ$0 >$*CcWEjKA2JAn'!|rð"+j\d>>i将 r20{OD> p~*LSENrp@mkx1fI%+tMX4z - Sb&]m0R=IM@RIGزTj&" zu5þ0C\DAO5mM Vm525z{y*[Z fMle|rh\~K`D=GH:~eԥZsj/bav/ҿ oR+^W_z2Yg}1gr6/.h\, %5Džk`>oD,m M\rUG?'B:g_Lsk̢܋ؐ>|̘:V J@jDŽ5^[uDM[1-*RMa{d׵r">mM5jUCC,!w<rR:L ^݇OO tz[L͈Dʵ<@&}sub+$p1=(CQC~4_p$:cWk, 9 /-ZoM1<~;JA ۢ ż򹈇𴪜ϵSa4sa'rCuؖFTöwɂ9)^vE}3KH[;!:*Aڶ!mG1_?>)a<48zӗ/wqÏW?S~춤J(#Q9wVgxc^{m(42M+>bF[9WpKv-Yٔ+0=g*+vǰHH܊8RyRu`㦘 ]c1ȤY.^"Qx+k+Ǣuqʛl?:0LVLo~Yy\@g"Tү! @^#j:] i a =፽/\7ьuIo}g#V̈Q2oHsrReK1.\q7#IԿ19- E@tN+7DtڿW(52n*i⇤ɬ9ǖq#SQFۏwO?R/IJ#M;bFۯWӳp|ö5zCßo~t#o,X_?We<7n7E?ߎ53,}H.8KBFRc!b k583SP.5e+5 dytdZ- KO}۾ ͎*O*'*).f\M(Q^!(HȩB e\*޺ҽXMIyVhQkUS+ѝr-[(g6̅tpJ\{ى 5YIʣnK%JyhY@7U3roB+KpDbSI{di8iЌdQ2yfJTdj`荐jvC/בg$OLr^an6iduPtuN@w xpz 6˗Y@kIA~$̈́:?@ E9j03}}_f ׌R"3ds8V o1ASlBor,imY 6ѽ<;3/7<*YQwx/XR'4'RUhQcNB綝 ̙T9" {cG*sNo{\DŐ5$kWd$0 8[ XkhAgU^(rIM:]KQ*bqGu} Yi({̸1*ԀۙǬ T:!nqpo=YlIw}$"!K^wi=F]V}]$ u՘V̎k0t*jP>t!!̯Tެ,+8aYM+o*ϴma.;2F |t!ghTkw⚚|ףme]r<4BD1⭧8 #WDmb\%T.22Y*+D{nOӜuYo϶nLYx\[(3 NۀGx/?W84WTp9mpԪfY촂FFlQ ?gD.!Ab> NVĂjy`RUNZͅK$4FXQj4w}yM:t&6IύHzi&9cUC>olFظhk<}y{_Kx:zፕhX$娀8 v| yUHe܉GaRg9Au1¿(ȍ̔(gƱ`1"<` 9A m-!7ojpLA%+k8Jm0bSlx],ӈJ@VX߻-\4ESS#>:WLc}F /,;s~/h ~ lq ϊKMJP,_pdĤk8i W8bXKI蕫BjEӶ/*g`cf1f!\_Ufn$@YXi~Ή4ğz I1~\f]kBӠ/F6iAn1UBMAZ5;3/K`(dRȵ@neuCJ8{[l֫'!HW.L8SIQvTb27y-"^ӠkfCb sxʳ (`u@Zۏ}bpr`}_Ktw&Vs/'g=9u Ue y] ܙ!d1tPa$N$I,\ P 뼀tH6_~."J8PBZN1aL} F\r$ " ϦX\f*KX:˿Ac>{ [p/k M\Zp^GK@ pji|؇9mh 2 f!j K)F,RNWmTlQN\abNîq_9hK9pw=jltP#?Bm0 I*Dqk'Y3 oZU |SӁp.̈G᭽[1C'&g db0/A.3ZUT:~- ?q˿& z)M2/N] 9r+d<(˷g̛Rwvu%#{_r`(ChT~鎥AM͘Ǣ}Q,v6qLz˅_CB`^ΓI#h=h\ )łQ @EO *zUxFqBq*Gr \Mx{2!)=X>Wz8jo̊oali*56n,=ξB-R8u+1ZYukEa9 }^<:8BzdZOBe8DZ[aÀM8r"/Q6e[cԽq˶p%B8dNc4ەk>`8t!Uf$p`SZ,Ŷ1DcU|dGZS Gn "8Ij'0 ,9 ,3F#` yX؊?}5SZ{kmr[z92_aqaOʓL+8BOBK7.' !9s _#{%<8VCJwٙ0:jcRGsX 8 ^/{)ra۝Tp4Xxs!W2vxT69s;ҳ;>-o%oZ 1QH{ &asAt|MiC{$=\ة% =ARW 5 U1߫˫ׯ__]~wy Wpt'Se)LBPW'^=rW[.yw[ľ=hvY9tuަ׼LM[FHm۵2W) x9smpk]CclXY_{B:Pq!dn& %z(!w[tصD9rBIAWsS`Sgŗ mz! 4|h{@z|Q{\ h-&&b`[.>!](K:%2ޙblPx;(}YlTrb:Jпj_@ƭzOx.qv(xZpz/yy]T K;D@慎+oCKӔ:=B - %( =M'Gbw` +)Xju/L-@lgZ ;\5RBx8"8x{$nUR=Qs8+ J\M`!JgΥ>ԣiHIY'|n(Txѫ \\TsSU9gK>R+^oisY<HɈ 58"dq* Ρ\ϖ:(f.~p.8IDA cQM<;D:"@_B;:u7s%零jV̂wx5)%LZSx&'w}xJ܇#3|jOOS Qysp\LtO,-U~~t+ ڟvBI6VRX$)3,.,vW* vӍT9R-|#R {|PΖJI"NKЁajB|zM8wÔZfgN!Jr{4<+jXjE?=KP<0w-XٰD/~ ~W!lM;&`NMQ:TNK>[YJҵȃ;幰RB\eP֥Mu6?`K]ʔ%nLExQYhU?#6r-W,S"„mAhG2iNKk{h5@+[{-;-lE,PVoTulhD+ЕvJq;ZCkIŠHU̼a G"4uJυEY:L"tsQ Y39Y*NXO@<Z%ZB(&w!lx2fR ÇR7moϦxt!U'BR%9O \|0Ŏ ש cx;kk)T@D`. PVxyN`}`Vnp$QCx"\AxQ]BFfcò#8-%#>8#K[kg;5G p;*%WAT0Fr=rV"~Ue4itz kD zElaA86#KD(lFI)I -1^D2@ (и=T\MID>nELXWLxv2ޔ:E#ҽRH#@[!!D*8;aO#wFc4Di/pBv'h[4jTnqA:)ޟR Ӄp.( rF~*ŭ=Tl<\ XIB2x}08+JZf 1_p,caPR.v"6 ~j #1N.&/%y 1ʄ}IeGR@'k ==d9.1dz^DeTϓnDa{-~<qg^/Y|Ě[ aSu42|מ!-ׇxݻp@=4 rSKnt*?&ۖ?C߷Y XD(ڟ݁4V]Z "4O30yx J],RoqA !"&rV֥ Ǵ quC.+xGӰ.;3EOXεO];ǵc -[}v&8#215UT5ffq )c%Vm,gm#qE*B։Zj?Z5#"zjo3I)uVZ!|%9j&`I˟= pN&A690u!ܮדa.Q,܍ۑA^i(^l""Se$i39z&Q&5_бp_wi K{MR9R 򑔄|JrǕp9ݨW~J6 in*{ qVp,|Uoa^nV۟}/J;oZԥC;c-P1:j6:^41|«wsg `d+}R@(؄ll#-Y &@Y-IFD$c%I"PMjArΆ$W.QEP #[@A??.>{l8u|Z6*ϻ޾)n[nux3iZX .LXx=乬p\mR !5]";PH"oq*$ˤ3u@7w?Нijc;`lZkV;$)Ut49&ճ2 5׫)?2. YW*TGOMb^=u费I*iüԋ^Sj)pzhﱮ>}SX5MXFTp,፳Cꪨś~| }poӺ{|b3Z̀,' EvDMK"Χv^0Pg$.U3g)Y~3w` v _"0zRG0s kr!|l+"Ŋf.8P*_H":xY7j;P4@q%}p<~ycG0;~k46@kM°`Y3:*ШF1hg QE~駧_8~z|#UvdH ĬzS(Jk^'}[,й*odhČ̌.E-jI ѫM %=;l}jQ/!ճޥ%r\?8 ͻ\wé፳ÕK27{8)BѾlwRDBYr"nyek4ڵ &K,y8*SJC};N5At$O(/WuGr |YQ-DLqXD,tSh"KMWqbm;2^rbx^\6\GA;_xi|Ij'o]KdV1׻}'DW/~ٯk~y󇔈C9Xf/ҋs{rq$U6mws~wN3yi(5)`92*X/3i$ߎ*zOjNu$.G‹b$4C^y nfcmoBVDesl)4^QZ[;>)a]Vq+n(%iI G3u*><HdD&[q1D"r6ƈ$XPv1!v(ܢ.#{qI}RPmC:h'>c,zJc@o\NKKL^`Ű{zIX},f, )S޽YX{`iΜ 97@ٽz4ۿJ1cc0uɴE1tXсT6'ZbE~k;Nl5Q ZUY&/3yc״rg/dz dTb̹7_qb~|-O&=#X(MS0gyDnkR4 ss+HCz @Hqk*d-ݶMSkedS@ZN3CNDqcCLMQ8#"R+HXj六TUK?#U KI}'%XK} ,U,}(2Xڋ`.RAӐ:42X"J)e)V;s@o4 .{]O Єp*AS{oCq޲m'=h^f1[4π&E&M"t)Ov 5%tc qUKvl!JJCk <6n02ړNEJϮ_OBkG6e[oRV<_,2α*n0Eǀ!"%){UEaf}7?&~sI1-zO\z*z8cM XrعESq+K;]St|6dgx6n}Id(SD q lVQ@7 \D[ *WH`T?)#\HĭP䄝gNL f"S&(J" a$*hPT^nU1l1l6k+/DcAg`6*![Vw2>5smBApbQ0D%jnt DD fF +\5Z>4nz^Q~RqrhO.hK^ ȝؽJ\ 9ApA60#{S>o+[`U{*O@ $=fk6Kn Uj[~F1Wzy3Ww7?bB G]"6laa#& iU]u0 'Yh@W.;?]ֶKѦx}>@oUUXI2NU@(K$CՁlWdVU;e#sY N$&#+2 |: %iܤLSzh -fzThxA:/^TAx8xAGx^1^ynkp9Gd@P.ueס,bSAVÿZ€)) \P^f=)׮y)wh^bX"%pNu \q-&pub\nz.\E{:*e!c Π]” {A4DC,!o 2*'W.OS ZYQI-hEi햦|0wT)u3Ž•{ez'~P7wKjgujJ7Na:ieKv YŶSP}W[j cyx'Oét8.#cy-ak!ȶXh[b+(@ӑ$eגKC$$Naَ9 FF%GEjnI_SBgl&e<=%kB?p*"+7ѸJ׼AVys\.v L) N/3m=Y/^ճ_|1=<,CR3>^؅;+Jh-asU^ yt)\,iU{Mvj MbMKBHj{ Ka{.hO(;*)DBq)0{z}vGS-b o'mUW-)O% 0T $bHJ 7b%s4 ͔ց*K}QhDP:*.*uaq .$ ({xC噯+E=@4%8(CՓFñ] WtȒdƯ Mb9# t#|; G0na5T#qܤG-WmkD"~iG_n[wVӃ^]#~C^PE,O`,OP-8ի+.wOW7h ܎_bF{Ǵ8w'AE)$.gD_ q"JP;q=6Hl/ u'>m?zjJE/l U@$L>7PIil{.q##TDŽS|8 E0;Ky,vY:ڻ,Z~ogoj|-ӨnޔWߤaٖ$aBp!,.KzDj(`sfъR¤*_8mT+~aǠwuP fK_ %nnPۤ2&cd)f&63y'jF 2@/j.wlg?T%~j*,@.9é(ƔU홣.ׁk/{.zWj&XT\ɪ̼H];Rnzȴ+0ր[ah+`.uZfm`bZll?/qxE*J,_dBYP顛>l;3 M2Q'墻oٗSX`G4WyYftSf:D:#D艅W ʦ,iryφs@ *5 ] ~TZ@HހGrc"j16PsX%? î).wj%afUx+Ɩdi@K<_B;mQc2jvs3Ԙz)iu|ɻu9"(Kv*aEɳ0W5yoS\nW4yF 6~ ?`bq wŦ \v—yiJ3T6:b4>D>+x4_%wf/F#%x!EɌ+W[+T6!wƂtHV'{Xȱ.{*S-PeZXjP x\g Oh KĔD64u#򟦦D{eZ-&)`yk:{k5htgrM9[Ӝ'nɬʏ"AnP $Om4nD8IN)IuU ݢIVYB',Η^e:A]]B~$Kɩb'25NAQX3ihz@T5T}Lq]4,eEEر$nhNﭩ-YhETEǗ-WQv XJj^cxr1]+0#O&ǜ0QR[&we^#QH\#뛻׷M5dlk߼Oo&6Iݷbr~wt~R %Cw77 jRuA0`^}sGݿ}|oaG.O#|Qlp]L! [yhi).4| ;-Y?EͿl냑:11% ca!q >a1 UdtG ]'g<=YnD$~4zJ7 TL"@(v(Cu9I^1쉧`!e|,7RmpM K$jR'M*dPXMP5SqaZ/@KKKb۵ʦbenw u ,XkXW%6Bok3"*$M?hQ ]vbH VӓA[njOOxz(#OѶ˦v_NEspxpxZ'4@psg)+[gι~^\5(\r*),7)̄\!مld7j \p-z^,GKi&B!ml{[$3[KLBѓDFEpPFdH rӑÚ\3u@\7|^ₕ-9G,XǁԵzjs;/Ҁݒ$-_b4e` c MgYED+oVh Eli#MvZB#pP^!fxA Zow E^] (5D"LoeHDh bxȔ>5-#-8RßE-F~,ɻb7lQGJq_ )ĜdMi%.ogALoRbT.۵I< hJ^H؏T_.Ϸ{Q#lfĴ d|^ԁEHIFp'ɞrZ!D츟a΁*T%kDv, %g֯TcLYhd-]#D褨5Ot>Z?S)6͆_LUݠ'wc6@} A /71Gn*r-qBW,zp|b xOBkoO֖uC[r VOɑ'=UO)pVSAGc֦RnH88)MZO B>BIZp'S_72\lInutwM29޿9WcT [`,H,\]yaHlv9F`aXyR:)Օ z+n3eu}w 7=7컏)Bs>agK;Nz?Cgo K?},6pvA{Z`Q`c(;Id4Rz>I೘2}>ˮ&z+52&OV#%יrSVy k [<hy*#XNEЦQ^: ~ZV;J5 Y1OWwߞnjf{zrѲn¡_I&M pˍTkS%كׇH3?` R J3W>Da$_>o?o{-uç2T\xM4$90D%HYKS4 Aj?l^W;s ZC ӄ @yb:.m%MgDq-*tl 5GbS/ Ժjݺ: *éa2,;YRo?qJP%t(ZyÛuw.Dt7Y#[^jkX$FMRez'ɬi[k>q*0֜uRrM}4S535YRc=@8UA(\(w?=HçŋG LȍMF! #!:$x#¯'=[UjH5K2F&>׊T(:. SY wZj)qǟPO "^Qx+"f)U-z.3D-.{Xb-˼!e5={rس[+ NJɉ)j`M@. 4#}RfoGxj{O:q `-"J?;BOW3!|Μ _%;K?Z"WJQ})aDi+3ї*IG/# }¶ >쀸9y73k`Bo 'CLlbfD^q0_1F"ǖ K{g\dc˝Z"rNG0?ó`^(J"7k]fqdq@ª.zY Cag4 EiṠL N {Mz~ZPytvu}%M^. m@o4> 7ќpE8s%H+*e< &N}x\P %X=X@.Dh02+'j{pIoS -暋*@&'X $D:m#[|X8%0~`mh nDܧnOʱ6+^F=3Xٲ}P$UIwg/t Vͤ⓻))*CcG9-Ey5A"m?NO@ܴe?DH<|NZrl a̸ DT ~-W,6 \:V݉z4W޽M.^E3b/T!#Ǣ L[[7l:=u7phl;İKy+#A^I9Frc4M17I^l:03A}:N\1679ʕ<%&.u&vٽ<iF#4@(X>P^\\BF(CDWX4#g^J~!d8+$廇o?=3޲$;;R\-''iOj~ӬI,=ËIXz_S_*I\lDKT`|0oKMЊ~c Ϋ\{PfuK0"p:bol Uؓw{}>0]b2ȄtUTCs"&4I~<Ͽ}KF[V :^8[a| (IWk)Dr&P4M:PhJMv[Z56 m Cݳ~X5įC}A,.`#DQD"lJ N5rP{dS~x@_#Py~F>K+*2$Cb!$#p:o &uAERA2b04Z7,L)7SAj%<(.,dž" ,d'az[&ض>) ̻ljoTB wqhš` GPL tl+pe#S ' /J-dCDD{A$ (h0Ӈb0><S2Wux7 0"p\=ܐٺoE4y}{w{w{w{{swWW@I3xIj 1s/yw 4ߛadcwܼ{yxK苁:o7{z!;=(+[T=YTbϰSVǪEZ bR4& zvd2A{umHodqѼ.ܞ;VdqБ"#µ(ez" 4Jv5auZz$5ZcN|PCM[`'SLp)} o6)`ކɰP G@WŌ3\σIKIKMF4T噓4Y:Q4Ѫ^rPI &k^oC 4Spmr/ -n6&& g "bGNm_]6?<\Zў Hq'RRM ٚ `U*j];OϮ."kYR &ˈ RITV^nZvQSKA^G2-fN^DؓL\2Ǖb;oļ5ݰA*pht?,Y'HϖaC37#0y5_sQ x'<5XjvPöP:l"Eq"? m6uEe_ ̖.-⴪KO5qmg񪷋-5$bϥ&i5v%>@#NGZe7GC؄뢽۹/аN5^pWv9JſU62ح[e+GAĒmEua?EN)nvLMԹvA"Ęj U urz.aO3]Ecژ6B3j>^87}G* ǺyqA;¿n֧XŰ`C9!Tc ]dĜM>&M1F\.K-M-C %~ڌj=խVB嶁\ hNEF޻@z]~x}3BϺRE0YgPvjۉ8ga]Uw'( (*d0!;RJxeU1*h~ 6=ff0*vnD{YٽWF}xFX @h5<&xJ=9׶)XceEO\#z"klr9T."W{DYz>×>sRQ  N$JLLSy<(qXB# %A=Xj R0I=B*"ғ)52 SF0R!pGb$,2iCS )]~$jh<"wPێ < n3OrkNj^icXz\#!`Oce8q3.ad渼.%X_ 4TX)+/:DM+ 24#0[ӜCZJ ;BX@t2r{37P>"`m Q졊á X<KҼ"J."hGH0lyxx IY}n$^Rp2!2{ {pDmY\nDiL,iGO$ \WvEZ~$PFh%7Yfm].pQ.#$)"mުi71A2-7<)~a2rVH M:6ߞВUvGLg'XǏbaa5B:ssu@m@)'if9\fP J~$(S(rIZ'`}]P!'*hvcAT/b@;3{W??5Y++gu|Oȣ$hj.>PJy_@17G2,M(/d2"ex,[F-PkE2aECD}Fj*c DHMS桮GXΈ|9t.ij=bwe5Jߢ!D~ yj-|Z+9gB+lt86( Udslze+'XXa+d5JF9ZX4q}Z;kжЀ$GGh"M ڮE;C9mgll8V5'av;\FE>P35JXKjӹ5=5` D¶ G^K#*)9CMY)4i[a NF#xD$ZliqiNVg'k$O>SI\lIMi22v)ȢF$N,Kl@nRGbW4/8QÔf,hbMār&QAQ5=Q  :dFxv#[h>WĜ ߖ5 ?b.'WL)$AkGłJFr]Z4eԸv R[/"ۻ; Wgӄ'y/3SF{zXepZp+ z)ց͈RJW41e1n 30Pb ]ې0,ki@TQ"s4̼R4P§Nk;5ׯT@0⦈;=sD w\0 ɞrmq_̠f %- TsRͦ{2r䥍#uGg$[ךm̌IFA>j(6qJI$Rs{2 ß6|]b<"h v۟;b;{t @c&2ye c>~+)ăpոpgWhлsptԍꪍhKqL0d$Дihk*&o p.H,!k:T5iEx UDW<%7pIA,i뛝} PʓƩq^726^ɧ-^KM gK,ψbol(|:q1X]->X %rC.*?sygU*O~wmtw5^O HDuWz+A_婼J&I iN,Ax㰌 Ŏrcd_anK^sڱYՄ{R%$`Eb4<镛â?0;ITk/ ">RIۨt-8DedbRAW)xWRdC9u$3%e |>⊨6񉲉C >[WIRH|4Lb|I-r$򵱛٨$}&':)yQ ~ tIYX3& ^] $!<7@#P6TqyTK3ĔL܀]R 1Fr@kEyBE.&3,6L/p?0KҨ2٢GFy- .#b1QrI5sN9T2KL_#$=)6Uh\[ڨ?W'ЊHg)Wucy5atE~1+n2!@AGEMzH{]\g-=v+pU_Xإ ncySWŲF92Q h9*plc#-\%.۱ $#)QMT[LQ! *IGL blnlbWq*4+Sbcl%+DX*s;Rwa`e+$̲y-c#2KgZFZL2ю*5 > &Ν8ZbEZ( &Y$aI 94 hŝ( ZjHm|4+e\QEv^LNW?2 żnj^7\5kRJav̾V;9 ,Ē(#r"`*ғKRU'&]: X1yes:nR$3ꬸ  ֕'7~D"qRL..(&:YW=W,eaCEM ZPC+"4p5R&R8,*;jN c4S4f?VPnk7Q"g@b*ić V5R6,EI f'Q'vf ,oztm0O)d$9'E^JzP&b1M }XAJE`RZkGbPQmUNi8Q&̀˟BfB*M-4ѨkWp@/^֯9ǚJV L5 &9OqN qY&6qI%sҏL :/qa< ;[8~ E!R$a,V ?e]%2x\̉U(Pz&@PkO6M|TdY}4ٝlG6^MNy V$-3JfPGZdo 3B1!; !Lq:[uD MugmduNC_D3 yv"(󭷄UV#-'4l=96ͧܖLD,[67St ژ>Y/ʿz]^@M KE::vNZy^̔K0fݹ '6GĻ^Q`c!}e2_eB!w?!?5¥5F}} S\?`pE^w"µ^v ] L jS7 avXouA6{m)wr\Gro8GKtފaifU&D#[B lEl5㯒>z,Q\0vu /GHE'HbԦΫ o%ad-m#ɡyrև=w^!Um7D >K@LG〨U[1V%MuR1/nm9TǺM,IhS_D"F~p0]~;vm2b:;I\Fa߭}7hG|j+_uԜ ԾV)HA@5c/m툮ZIjAF\ ΂R" ʜ8rHx7?(o> 6Qx8l+6ڶDDNZ@VaviUߕ LXغXޗ`K#SE l\B-@FB沁Î.[y=Gbb ~QO p˥gDv+TLeSÃRlS8P0AGE/t$6(u ':ͪEx#BXy eߌ~ PMb:풅r"cY{Wp5^{=( .sNwtMءKXvQ`Q G"&wvrU'sXVDo;tAkYüR3p[isq&se \8[G]S\nk]VT"zieΐL&]Ęy:c]A2x[cAӍ;qnǫk߄ 2Dt ]%ݪi]}[njJ Ⱦig. *aשܐ.Kƌ ^\i.nù 䐉]v?r{޵nW̚]i1.Œ3. ';據F1Ψ Y e)ͬKa,rY#{9-5KIG<2+{.c,s6=9.d春].''&S/eom25t0͌Γ#z.'r9İ%c'}݌%v0%줣c7=PM"N%H]װ3])՟]YkfCdRB3H.]z  jQ)[Uָj8qk8L]IPr>)UE9a,hE[ Ch# {I%Y ;CcҥoN 'Y(fPPiyK@uta{]TPƙ9ͱ6㔱:|$s%v%H 9jmD)cB'b7 qR bltjGfNܕI\暦,+: 𚃍2jie'h<8w;xK%K{ ٤i.o⫦XuݮNAi )؉4^MYᑄ6"oM~K U CpǾX./{拡W'{P3u LuhRlj[ULh oa+; eT4ˀGal 2˛Wׂ'Ngs2uV ǢkA̵'iN ՅpA8!\DaɦvТƜ& œz̹)$f©t8sj|Sy]0'`K {؉@in2o:a`duj1pYœ,v¹ ;OHq0 .U7E|lCR?=3X(*[A2qr dH(Sbna5" ʴ>E bAkjTJY׫%v29"FuG`7 ň KI֪EQD{abY7KR]nNxY"aN$̥]8.7bǎv]0؃ z}j(WK!(DcFq.CZL*,Rs (jjJ5wp/S/E_$ "Ax8+@^RgD,Pa6n?ɑ\ۅa!ҲaHDF:RT(0狽_?P >5ˏZИRŤXK:o?gr1p~ׅl:XϷ ~<'7me2 8 O߲YDcl`%^Q2L̑,; 0 ;rK-~ww)~*г٭]9{4$up&%RTC689?WIsۖT %l'v|*]-46xvg*[8OU|_//QzqTzE>] T j>+S]̽s`CWuS\S2 8Տ8KLARg5KAؑP]2~<紞ᝰBh.5]Xz>0Ksf_Kg^Ʃ!F75Otv-WT_fg> X6MH@*Aw~0K-z|4΋])Y(R;R3uWu4qK=rq_ oMQf2C$vlESȳיf|sWVRbtYG;}E|H[e ]K.<>2ⅶmA-$)_́ 5S^WOo5Y *} >+"HIdIOOa0wI6ї*O!e< &MO-[} -LVMCyQ ՗|7a;D.8HMi CJ߁&RHArP  oE?C%ca4A ,6%byVLFI,U& rYܤd b|<zV~T\VKEI$5͸mL,c:GTM=jsE k *r. xOO\wo]ײg}.(WΜ}@xz,{k 8WЛۇ?=O~1|Mp?~x\8h4?s $sx~]EU"M3lVP*}!h^LwM13P/Lw`\Gbu-"?/M7,j˼|4i+rS"6׷7w7G[ksK Pu==}JkP|w'/}{_bEw1 o7~=jӅSc^c-xCoޝE%xޏق>b~з;\| ]ĸTH5SU ibu_Pב!YqH,%8* VGpAx`5!t9DQ6Ò΋m꒚V")l47:bv"^ގ{ U$p6IBr1:X'Zd?Z|*"`#%dz}^TY(&~Zbը\SUl?h t3Ǵ\דaR"Yʍ ib1CݒNTYVa"H!ȑI(;9/S^fXx_o}uڻ1}oo%H3m@1'O*(q03߾̧<ͬ_jx3g]0ÅFj ȄAy>\ŏ>F} U=ET:ԯ7mhإ鸗w)IM`#'c0l/`DMXaİ#^ơ2B\R;p?+a:k*sQX}pD>y ngE؁Τ.IQJ#|I8qCoiJKTaN>i!夢| +נ2+R*`S>KRu\=qc{ {zISVYfiA??>iÙЊO2ϋ~rq*m_ˇ>>.^?gWz#45llj@(f}Ei)Kqsh4$|(O1#URuq>ٹ1;hU1 F IjF 7 SdRVE(ĠEJ{T ]h ]Mx(# p9A8}o6 =J$ײrÿ3xa-91 6 /OFnyQJaر)6iM+A:I ĚWޜM9 C͹n&I%*Dyo)@J:9 uȬ Rn[z;gV'PF?>UOɠq@ P5>?@*vYF1dҬHtٴn6նǒ|+FDs0j!&MFLkmd Q)̸_Ԣ$un .Iޮ|2lYMi_܁;iVHeaE#1̈́t9x9rq8!α{zIFh ƺȇ wé* ,;Ghpy]NsQ{/{OZ|ַ 5Ev"5:=DWx[ omI*֯ n6Lwą$*v5]P?F, Rx6~BNXRN5Ϋ;@Q*^o5Ф-xJS%bClr15:#R [EqL+ZE6 UBx֠{,5B"։~ { ]n }J=W 9a M፳tGP\UX>or<`/㓔2,]bL)2v|#W( ʒ/Sp|NHpD KTO!$ܵa*sWy{ao#eò47?Oeh++(!Q3;Zü&o8ya'̈af1 q jn]\3kdgЖu=3W$IƯ= ɠz?",Fކ*|)MմukIWJ:a}LY*œ@Z'-^Et,۽*ܽs+ l?ªk:O;,eSICԡ"VVWy)ޮ_rO/ b1S6@,9:{k8}{Q*_KO<*|HQ[f8 3Poж#F~FP1V.o@k3#qEGCsU|+8dwF *<@®g.fE|v/!B!5+-@I0Llt[d1I J`c2B:=*ɂmҤ}{nU`FVlw+ƪhRϜ8upjJb2_=HQ._$A4~|Aѡ"财و6OE غC6 D>&NJHrd^F7*70qrC=Gg¨GUU&62g'ܜ?bωpt0@ J(iӢL%jZ vO2{GûE^q %կLKp0-_ox?&i{aU Ȗ)u@Z>~xݰM ֬ uPl]o|~֮b- UE~ǎ*Y5h (!\$u*)iӆ%!RWͷPxNnLmx ϺD6=H尴huuD;^RfS$G y WRxgp67o~xC6:;ok8}j=}P\C:߿=]yi EgNB8]/"(CGʷbjcl+%/)d@^/~8?#2:{x_F &,]Ժ{3|,!Fi:oXML\y7 1Y*DrձvT4Y\#ʢK,4 #9iTt`lPp)1 s?TۢER צ{~ɀ'cQsg$:k&ꔃ=emY9٩t@V kեD':鷼SڙJOݯ0Q:.2/Z[Јs](еق;&/}H\2b+ eIpwJ8J.>2s#LeKV!iՎ_͆)N)j@8E NQe0`k}z_ܢt;ʇs(ua<suFyYU0MљAAH(arc6#ՠF;]+J/~`zjZ}{A=* O 'Fa!B#P.or0qOM]6^7x}O1eU'WCV_˵,L\Do'F˦>va\K?ow8:KTW_4@L%\{8J$z:oWG ћDK:1T ,7/cBw(Ku#9"òؒ[e i4ju"8z/Ls!4 5lвvRLR??XͶB0 A[xB3 }KHa#x,8;"q] >˒f+?"ƊB7o"@xxcJJ7R`yȂ>`c?].!j] #ļ"D0*Ү+Y/4-a(sY Ueik.ǻ Åĕ+*lcyU1e?FU~#Y a'MŻ`,D/%7`RauI*I2וm Pq3˦WL&hݹ)S~[o+/; Դm%Dב}=Yj:6^u%1V⦔Mj!t~]R!ͰrP^4@X)] B9goXSBkN\7nc΅2>t8K) U/ϔcwƻѭ KqfXq,Nn Up^]43.7353&%6 :Mp,\E+57PQݡEED׾.}BW@ "L-TBGߡyDUb(l#|bJ1m\UkԂdav1'&P?"p:bnoUB2ۘ+a^-^cbt<*Mw4 #}q&lT{OYלzP ,)) 9>?6Ln8W)시^c$@ˬo+bz,0Ⱦ__U,Cy H|Dyp=&ORU_(a{7q%Da%"ק3d^ 09hUZ3,/ҩJEo Ued1Ƥu3Fpzir)Ԁ\X> oEYQ͑W!l 3fC 3`*5TU5Z{?##<6z@jtCR c3^2z^$2b1`sDrd:ҞGxbJY[\ocFlɖm~A)cٓ+NLboϟ '8Ip>`=%*cfH fjX$$ Mm1$ ;b_(C ]8l][6,܂,rTA 6z̈́j0 tVc5d#Sa8Ƽ[X/O71%#jrK li6ۿ\+|eh =8]> cŹ3fٵ%siDowE&ar'R1Lp! `8;t7`V'V̕";a͞@y.}|8hslO7Hۈ!Mm)]7js>^i-5H4_۳402Rs=Hѓ$zŒ, y9"r6:JRmj osR|@bD{Pq:̙R,ghEmM=lO"R}ƌAhk|]4)s0 A z?eTYKq:@΁HϰzQ=''볏վinF,؊|$E|ȃ1ӱ@;P3yJZ}dM؁L^Cn? i(&=b{g0C<˘\/5Si(ÈeG66}lm>L`Z#YJ؇& 4 /XW`|*&5>|[⇟idi{dqKػtΏbh FuƳq Z`kb" >Xw6(7eބh^`*ݼ6D+~Ce݊>7K$:L+_YLӦ&݁ILıH* Mc_"Kb\%۫sC[,:M50MnnH7ӊ0o< NXI$eHR zR'lA"#Z~ !)~õxע#KwF< mq7.L:Osa7zUN( h$$6~r,p,4lANY4]IŁr15(tJ`/$D紛 7(aP5J.D@妓/0N~{fsKFI<'ѓXZ_T3h?C"+@Qy;R,vPG¾e~c w!_9~5Jh)a3S"gr}|GD¬~M n;0ҳ͞7R/62᭟hۃoNB$HB#hrںclè|e >eĐQUfޅQ[&vvl#y Ū>< .>pUF5r@8/!;JpJwtu’{YXa՞3aBذ-OlNNd^6tޣE S%G79i9"RB8a0Mqos4bZM p[A/I(H_ 7}e3UP6$2LCAPX+ a7&ۧ{j`$f3`Rr$mR7LmLmT@3d{BdHPpwwKUI 9θ3rBmV7S"C\wݿ/)n:߷%?^:RxD_b2iBB~-rz'Ի}7{-鹬`R>NmD4R a-W>T ܵv/|QKKok9-(B5p¥-LbֵV62 mi_~CxA,!/ $.8P{b6b=I3 òH-3ANGI.ܜdIM:c4ąqkTiƳ 'Q%%\bX`O_ǟ!i4^~;Q~qOK2no/kXϰmyO4<_|z _>{gD ۦx-cR+ kB;s}I4ϛpϦ7UueCssJ܂_[ڏS.̚@@"W9PY PhMr'|s_r+MZFct|t^g3`LC\(p4N*\-t@RJݦt`?f'C>+'פ?$YAF3HQ-M{9&Fx'em>?}xTVjA1-+U.'b}* eD-2O nCK,. s>ƨqı\:2 fT]ΚCm:ZBDR`Wε WX7j F ,F,*uRHxiTUD %>bO6_t銗|t/Ԭw@c#"N6\Jz#iphz4ئ=`SlJMY֥GSCTؿcZ ܰ3ҳ8)ydQ́ <`ƤA gPm1nk12{ \̅SfoC6aʖEtGikZؑ3F*n}=UO}:AA6R) id|wD9TNfʥC#j{cl"D!5#녖(2ߴes0%"OqNCP[3n2]λsg8KsmaDV< 2j6j(aY@7]wHn_wnH#AF1..*Qnv9 ~FA!KZZjo:ޛO8=}F:t8r!:`wo>;2M*wc e N+$O9 ,YKtKBpáؖ8phƄmm=$sBXJnETZq /ٕ6G迢rô-, <POO$J7 у(7I$E5 y+]/YQp*]7`"N^rlw8sq8Qc__:kM%[{Kᤩ{;9IBkbRbN #(Fy&0kk.kI>via$.|tGE2U1IY[Ҍ[/"Oi"{y~?}a/?\E_#(m|nǧ`9C5/4|0iQ9Wk\2uDG= 9~_HNilAĤ⁧7$g , {fӟi$2xhm7$A/:̱`QzJ2`gkK¬AΔ]%, Prw،2Efa>teii}RI /F#3(FCeE Ǖ 6HIs=ࡆÀ6^TznV2KMÀf²m(+ +V qs^tdQTq\q]" @8=C(A͐T17`/>d49 D4;C:.]F͔n[Ǡ;elS|1AF`BXOm͍0|'uƌpsKUu;w!P+M+~fc8 h@5SZ8G2rO5`rq8˕i]}k2bQl{&Eb=-qƆjoΟa>aoݾ|__~SCqZJ'o=9@. HfFtj7R F)g#+cR %5cY#քaFrS~]~"mnaTܚ5r|v\2]E.<u*j ^Y/{!& ह"Q{K4(_ GH\lu;͐j2;V!֕'=R_XBfR.h-ŏ3"weɊ16h8՞5!&?~L!OnYf ]3ǧsODr ~5g>e y3&\&M m9Zb "\NhȭAO,E;NUT\&i\u<[-89Te R]-)ga$ば!e!l+Fbwuޓ&˹P0c|& ^:dXI7`tÂQW;Њ,n ə mil@d!N )wd1dM^u^TEʮBˊz@V1.rY Ή(/ dJ49-BX a՞{Bذ7Z!݂Otq| nXoh&QLNI$!V3GJrw' )tk@!O$fy%'Gk88te29k5! 6< ]ao Hz0Y0kY Mu`м"'S9"q\Mnz:ULMUs#:sj-o.,ޅ N@fT |Y]M:31{ kXܹ6QöQ=kNr ŜQ1r{0ȣ SVSfp.V F³=j8n42knEfbBء#4X[ɘgw {dl 42i ͹IT(NeR_%1|Sq?ۦ*L[ԭ>VH'IVdRDb8߯2 `y1ۨaL6 6 Ke MHb&KAQ<.{ Id39.$<0i\^L4k Z#"f/VY'G};whU]b^uՒ#+qfEg|SZjVT%h@9 Yhl.E{gC8۞ds^t q7jUGw s%ĸa7G0>rI'zrҙ1m/ T'<9^3EM|:Q~Ok$L-;qVA, l9%$.ijϷ}TSUl)Xc8t]tdUTn8ϔH K OeBn*E$MSZ_me9,rͷwwX_,#7Aΰ:~}KPfc$_^yx|~݅Qw]Iw\܃D1` Vpp?(x ήp# }}7{sCY a6|%p^Z2L9ol/hοcN"y<nYRJ; 8y9(q4BlhckLbQP@o0;#YGR H/cv?,-%=]y;0* 7V62$70E|p5lin>cYx*ZI6RqWx،ulZ>7|\v 杰. i)l:Ic-Џ"(殭4Qbh=vnYqόljV ˫^GHN׹e%/>5Qа'INaUS:ܠ.Bhyq7vz΅‚ @"(ἴIY< B[`v>`;\"=Evꕭ>Q+s,%,E2)Y21D.tUJL!#-B2॓êПҳ_P'"y,)A^׭"JXGĖr9onp?~d/--p!AA$|ze6rDN@4 O6(aی}iv^|`tS@bVJJo|6v&˜7iT灦7thT|kZQ8Xڙ*Ѵ@+v.^KYd52T. Lv&^x`8\yNUEqL@~CWx'S0շ$ M0ACDelpj>gۺO/։w4.ܜs`ZEgDEpO NQ`.=|>fÉZ?pm5DYi6#cd-tx'UUpͪaTg+0W0b'i|'/^: ԯ6Dq1WM C`D^X2 ?EF3YbW,[TR7_;e=}ЛX'> `ݞk% , 4Nj}~[|y1;>{ } M c@N ,gwy$I$B?X6ur]txDuz qT1 ADa՞3Bذ捂}pR6O o_9ku N9o󺇉Pң-u>_xc__H96F*OͼUhKv JAjD+DVKC61c;-i;Vu04!xM京MR"HF8PwaXgr'Cccb6oqR}+LO>?|<>}|=%z[s`]ImS>&WBi1LS # [1CҢXtEUR3r D9*>6q fOg9T\j^e&V'%|x*%W!ҵ=)V$oM6~XIk"X$'2VnDSeyKQZ?&ƦNkbF}vMeAEW"kh\pѦ؆/6>65^PgZW'+GreA1E!kz '́ t ;6 ,1(rV Cd[G&:np |FY~+=E|Œrd.qR*DZ/d:L:ƈlg6+& 1O H2G;N12,b?d%^HsАzI?{r ]2w_Yʪ6Y( Z zN'>>QW[䯟?sX=هcE)UcTT^]M!,\fɊjYFy&I]BBO |4e}hPp;1$]J煖ǐ843Bbr%_7װj@ݲ6=[ևO褄Qw:CW{;!h(8WWv0o+j?Q]A=VNh'Z&U sL: &wc);*9XY (8e9Ԁs&fnP9D[pwqGf BVOz ig?-U-=.]ڹ+ʬ`e6bLfN,ʑ|'kpp+39c)MU}ɣ {2Kܙc_ڢ/ HAG/(WG(BGo sqPydYG{MNg4ۭ5^>8p:0my9/'L2N Dppx3}$g'@3U#8Hpv*OtXqC4lJ<$Mi%Ӊ];Q{JΩJR?Cؾyى(Ւ^TqװjϽqe!l}C|[Nw~JBU*%Xl͌9g>pN{qÚ_^. ۣA祰O4mm=}xeZ5xntGSnm>p4On.qW!7)tzidYmYёܿO ߑY?pثYi3qߡ&"פ[ns+ C^Jw{\y ɾx.e"lZ`\as@+Jȯ_|w{y'<99^M37̆FH[]2S[k fzt fRpLqrbݗQJC֊ʉD؂\bE9p# ܌}b% '?|( V兰, V/`+w~| *ڰbJ G/9zZ}w!L]l4m$%%FBaExU^K*(&^768FT31c G~IP%cR=>sYr57 %5ꉔd$4:FgF%Q420*x,|ìg; _[Sx1ۺ>U;3JMz祶[aۊ_???^AGJ2bSz:2CV kᇭ†2~p{ww?>ػ?NmCow.5XjQdCE=.2\.fgm<J,k#-vT ²5BLG \?Uŧxl]])0vw[[ٹ 鎈o DGFHy2J$ #.5GB~NW@W~yT aG$'WVKa׽!Vcq=}* 'nFilcJ LQ7y!riKrb^N(5Ak3{b!U=y` ɊHВ%y*wJNIU"!'uHX$ϥkDְNV}GsmdTTfB sk2|7 <>Q =_UѕIz=fP&Ӊl:(t5ٕZؕqx%; WYkKoLC7~!hpP( TL~Z F3:a5=EXTlKc<~,[KC "mx&W:2ToM"6;gSOşZ۲1s/5E,>6OOylHf^(a˂{9)]m}x/?'qR?N|q9%ƉN5Dk"DžZry'}:9/$)5FKRK C(<Gpv%h^6`W``22kB*DXlj6ő 3H)?R|9%X#^:=vWzW6)TU 4KI kmaTk$%H[* ="Kfw,Ab9]+@x6^GiQ<&}%i(U۩,W'=+¢XG} ^t/ҩhH+'+R=>/ͳ:"' 0<^x)HG \e½cl'\m!:+"}H2z pt B+02~'tB^ܦ@) \' (Kaޫ72//N‡4终Cq*tq,ZG N=[4V@-{LJMN0̌j#mzY? cʢP0Y ИIB>U>S*װfϝeAoiQ=\픠9)A<%L;jcUfZWӲn ,֝$.|dF&9>ꗧ׏} ZEY&@Uu+*\^UUiĔFZ,h3W=ј<ӧk:L Gq&7h ݹcT@aX3Ǜ&.>=˻HQ9tUe#NSt[$O.VCq 2#@చԤo+i{TaTo*7RfpXF*q}AR.\ez 7MH-b3lчo$؎^D^;ܓʲ0eOR[BAA" O7EA-]>Z)Dsqo\bϖG*}~Mj7bFycCuKUR>j5ʺojz~3mz Z^p ,)>9pLq0 q8؅ iGPԫK{{2#R’|UWU&E]rs%G"ۤ1A o ̅ZܠnE&8*P?PD^DoL=,f^>OH//*U{/ a^*=='H΁ .dK\Y|>9.IrJ8@ʖhҺM2/ӭd4SąR*r˃m9qLAk{VZHײhh͆:vux֭S>ĔûORgXRڲ6= =P]OC_y{k!N1uN0 DI]wJDz4M$ ")dyb9A*S=EG?uM)ؼK x%6TudCe)lִqI؋T"`ȣq4'-ևpG`^Z6!Q'C/ިrJ6nJn1Mcm)W0̄)&et+h1F3gcԲ6kGp9Y`J/oޒUmLԗhc-c_'*ωjUS ԁMg?Y!9ZD̓9ݭLOEڊ, >P,X|FDhc-u+аy!\4!ܞ,M{)ܷ&x'Kx{kjpu,q8\R($,0du_E#$"]L8gᐰ, <40H/vqGYF`δvgC g} +FV;<1 Pȓ3>ƶE9 Fs"lss !F9 hTʴ9 ]Si0;8?gGlc&* U)FcKI#.9na^}~cEn67*dA/AXB6?Ǥrw]^ F+L9Reج 86*lji,Tڅ*gHzNgƆMk0v-Zʬ 6êhi!l8YrG4k]H)e=hy"zÉys=+]jµzZ3&XhV%tٮ#qv9`pXu0,ɤ=5t3Y3ٷV}U{@FXw~"GQʒ]^;b}DŽ2l+9rȝ%"aW8/YA_{FI':e/y7ȋmт㇈vy wA(v{\m~צ6?W˄_<F %Lt;DMɠ0l}7js`~"@p58XPW1fdRxoco $`eo_5i6y3$45Z1?wR"(1"1)똦%^wR۩PlSV2L >^7vTpᄎ.?{Y퓪+I;yNn) \vLC/IڂҌQkL VKxQBH%fܔoXxwy꺥)'89hXQTln K(0} ja՞K-Bذ~9.hwᠣVM`VKQq&|P-e6Q^*/@, LB(]kFxE!9\_˪טKvkN\nt2V煰l,%H9-zխ"ZFRr8*|%2#)+LjLFꪌz8erAl twǒg3h. )uqNKaSͳ$/lw渢ʎB5@R H7_4SZh͎cuGiVT*e D3vI!-QI[l'l2po~Jˆ,od\14B89|]_c=zE@ e!Ėv1Mɼ߆s=U<)}ENUЊVb%^6Cf{"Z3223k7D$.h"4#82HWX[]X57$&+sLJj8yٌۻFܽM+sTO0\h`3*VPBhh# _ɚ~y nhPiJ2"Z yn=}piyOsCWuMUJd3hP`vƑ+dA1~'䒂$IWFz?uepO0P3#GE0&$W68z;Q(*ppi8p6o~Os\KFoccycj A sE:FQɾcPĵrEն0O;x" bR# Ykc p0ŽPxDiSfA/6abAR$I)Hm"l t2^` ]B }X|z,#4Ī7K +a[QU)5NN&ìK͍u[p=<|ͳ)USIM8,w'PŀT0{#gX Z$N"A;JҞ"h՚Qe%&$ѦM618'ܔ,S5u/7 6ؚ҆w8iKƬ#w_ 4VFSۿ ҳ=7$O̗bP{ka^`Tsrf%Zykˉ/7M(R-'t\M @.aL^̓ 5\'-ٖ˶g)=%Ls2T BY-M{ćq2)lvĿ=/{td]8+(48(;Rfcq6),qReP2nr~$I5ljVoys<%y`N}x|<ׯ.yI 8jW'򸡢9]+iĿl쵱Sfj3$nB8T{$/{ӞEBNe+a5A.9Pum9"X^L3:ov`KAo\) ګV9($moNraI?I#$Ҝޥ~0rC1kk8x!~DQ}lI^tM1l]CNb\buٟ5rQ}@ռ.*zXBذ1(NX?n|"7tZArE8jZկܨ@,;GjH TiW2@K4SIuBe"f]1h1{<;qm`\ۋ׿~'c ^h=i͋RJdZ\ԵmY< F8Oڎ,%:ֲ'0>"kHPۈVHᳲ (,qD Wyx@v~XO5p)t3{Ι* 쥱gHs`=:KKyt(ivUr;2hP#M;-~DNEfՆ O,Z %6m>KosAwɠӍ9wO_ƕz2?^޿?}_n'H-': L$voWJʹ+/v@qNVjvZx[hB=8U;c/ؤ,rc5 ` φ0y6݌vwr`t 7V]R|'F1Sצd6]|"|Mc`!ZHʭ% )ꮩ0qiiPڎ޽N*zmluCOyDGK.!(jǪ%w e&|"w}cp 8ozzI] f-*HGe.]} 0zL(8KAc$'F9-soΣZGR0("t1J+hsD{ԟxh;*<(}E&TzK[ɱbIxrgWs$^_r/xPiE(-Ս%cG_aMq}xjN!EzB;8`K6JP;lT&CM ð2YoZmzN8rb6F9ffg Rwm0(N-'6;$΃!bww;NY.)E ,Djr7e`†.Noݐ%]@np횧=6_K2@ UWkqyG&)Hڌ ^pIJ-L.ѲuQ,`l1`()%uGT=Lg٩pe!*RP/J9Ny%{GS ̂Qo4,~3+l ;8:Eʤ$6QRr*&!>hd=R$PdF\$l+ O뫣 fXNdYT}٧rXVoZ ,92sDmae8mKDl%B[!؝JuHcbS;TJ~"oT1 XJӭNѤR|C5Ms.D"H( };<3 ډ8p.ZkaEH`"`E,!+nX<IB+Y]N c"Xd6RRPޮx@V3zQa!LuC(n]I&ZI)RZ^#EruLc҈ QlޮOW&:~(80e\ VfLca@L.Շ:mN4\Y FI9OL)Ue _2a橊t\PU2I x93 Un$B,5Zg>'q->!m>2Lx+XE)FѭT:3S]i `|J͏M x\'k<\õa :sZíI.4`SE_ @R?:wmtG ,3oJ_M&lVR71Ia"[mV/.gT@):ԓ3' Ye <:h 2ZîwS.ZR `"[d/Y6f;7E"H۽ M2H4 s6VR/7 @b:)vR7S8޼JLJQ/V9Cs}s`TUfFz}Y&$%(%jA pkVQ^ܢN5S7׷@~ww|'__5-Oڎi3 q휂Va ;\Kx8h5--p߰s: . is_ q'#|+A,|z.`f]t8 y3L ;kd#1Q yJ&Dt%'ԄPKSÆɚQU׹j:5G5U^g?I`|o=;E=8fn6!ɺl;Ɩz}Hysr:$O|AҤؒNt#N.-=\[ɬGۤ%VB.Õ̚J<(&#"9{p"#i#buh)αSb]HcZ1~*\8zXM#-WyfY Q3¦M0NZmM9\9i@/sBIyl2$Q%<etĩO' = @'[\cEu$!ϹD >h,ˣ:N]'5U8]>aU״6Dݼ7ņyg_m:tiIuD.$` v_2R]ď&E%'9zeU5kY,5;0vֹP3 )יL[j+[L`VG2xh31>̎_ê &>8˜*I.fC4+)sF/aK]y$^ЙB?AP*b*]y(_E f2P ,TjXLKfΔ"LǀNy%[f帆2;|zs,Л6H'|~Ç~M̡?\50jK- vcnX`q4faX5AMn::g+LoPB)ZQnn:TnӛŘI.FhNc|Z? }Io/<~yz:{KEJDGuqb\ ) ,i%2JKYAOYdLM bgr\r]"HdwQ!A[|+r㉃g2F>7LrFtYRz%* ]`˜ :|Ehy(zYt,8Y㊪@$i(.a,; Y;iw,LrDRz%W>-L(##]$lr&*[vV#o/\+oЯ&VDGEg'\E- Ԧr`q3iv8C_m HTU/9&+ެd)I):S6$u{ZUqg tj#ƋMfIL;vZ c~YzWa]0¦`=Gq|,ٜz hG'M@xuPShI{r[ a,q7K_qGr 5iu9 AdP^ lҩ# y?!Q7Y[ևeA^;صJWr-+m"JB@V_rz rFQ*TY,XRTL;X (?'?<+"n‡$NIK:#SX$la Z$Zk BtRύN>=Q`[`99*)5=(Zٌޯe}IyDƝk% eV印fuxfcTG(YehfF@_ҋR 綜p@+\m }51/Hig5˻ox q7ktV*Jϐłp/]c?u@{P0: A `YZ"dh]Rq{yu}MAS"xӗݻ OfQ\cgHIXGXj?MƌGZy]<6.Tǂ 5>J`c|)pRJS˾x΢??:p栕Gի #7\]#:^zC yya%,͞:zIͰ 9Tc:raUaLV=1) uS+=c]h*jOD;u^ -o=GyE?*4l{_?Lx;:_+Ƭj@qQGY'Uޤ?by $R< Q#o5J2D{5ЧDWaWMFJ^Y(qA_=$Ef'8(3}aYxexcy{F`nvơ*nzA }I||_Ϗ aK}6w{6hJl{[F1mD]"p PtڈK-{3I7,J0c:2Ĝ3YUb%TXtHl.[`d.u/o7K  0lp.ūAqv~@I-]8vU_)rAeud`t|*׵w @iՠ))Z9jtG!b~\(c! 0,eMrB' r 8QJiid͈,YFhd'#s}#sMvd߹ uNjz8(i_`8 'ªj/pi]H966[LP^s`FْDĞH՟؉Cs6;%af1brOȤ0ݦ\'a:TK<6jw--0TʤS\tLE;6M^5HG D5 lc*m`r 4LPHyV^_Iy/m?SC̍CT"ɒMߒMCFLMF%=3:pY"qPOݡ0qRa>~{wSx},M^ kpBxL`rT\ 3hlWa&!,[22r•!" %BC'F//c׾y÷"F Tfpꠠo9kпL#qu-oq뻽Qۉ͂"5"rʤe~?r61+L:lvCM͖]ˀ1n.5e1-v9 0De;R8XA!9lPNǹڴTD*%,JWfSZYuJq|)י?v,8Dr4';I_^q9Zӿ]<&srD TQ'#95GS,"9ˍC&)ܡaHyi=ϕȩ6%҉`j3A6 =Bf%Ymw̪ۤc]W>w(3Xz1,u킉N%Q*9x.Qdr*I?l_?~~nM]M@!Kos1\SY 0x[*~z$DszJ˧o?oHOwя)LD)?3bW6`ϱyA"Cf,blKT |M`O |mfg]2! #mŨLiTk3 Lǒ)R:Nd/K}D %yF'@MGzB*ԟO?^᧛wo| f-zT/F mgvә!M llٚ dԤE@·;rKS} Tᡂ`K&5s=Bk 9ؕFQE]ً&OYJoTی\jh?kx¶FkO\%}vTm uTnAj{5xqc9:vVW,g긌 5~ OIg5SOLp W*l[|Qݎ Dzk9BNQ cU:' *VWbs-@ajDЂfnQ7GSP'F9z_ ^m2p`8YL]{c~8wUxlJMyLkq~5O\&ͨ7s,%,=L-6vK{UX2ƴҝ,#W uFEY59k^AnORRf覲(sѴV4sgq,NoVyנ>u# &v6 m{b$6R "2r>8)9XH:htLyMc=3;Mʚ:z)koh^ESί[єύŁZdReZNh25=*8o`Dy IRBK[]d*mGLY}LiɒEP>xU! u.]=*$p`p rn~ ;1ǟ:{E:Ofr4=*658궩@ +Z4$!J˞be!BhS3тUեT Ap`GT="V"־Vߣ\\a.⣪̥TQe&d$' g+RbDa!6Q%9,q ˻?H`,G|o^,8y | b0'q<||P+ |FWώ٭gbxZ 2a\'+:&.SWH8Ò0/+5rAAxLۇj]\=FN\1>K4 C#]U}נz*D(JK*&ƌo72aHslɐQfOt͠ԃCd6a}0Iu=k4~N~yNU/*Ӧ%_S(wxsN=p(n_Xkd }|cy$5MZm;FƢY&& =n$t'Ĝ9:ucor^y+ܺ}Gʳ]Knc34226'ɜW^so8'mΛ,kCjF9 jú` ^Ϻ#<)CYrte hC5Li 4r> c>pM(0;ztk>9whM0@6wٴxM.bZD(p3d9awp22zsmJL2 &1H$O 5aL6c>7(p9,FaD0cWM}&0;A?Jh8,WvzaA=J8 ; ׏֛L4 ~b@9;.}8RL+ʜH 'l!O`)cNsN5N!kT` 47mr`74ٰ˪H/˜ݒV`Lޖ$LVqJC*ZZg5_F +miB-+,Uo> )!> \+7o4vqRjsŒ럿YJQ`Dm }L#f Cy _:s ^.W=Bp Zjj>\Li&LfZḡ|E 'N$0=W#sbdHwMpu(L Orj\`%(G+>hqekB^-NO>|yohlR#Yn/?-rǾҪȀP{Q􎨵SJʌٲuwGi[췖RƅˮE t$"{ځR['cJU57q_]wD%$3JQA?a_Sd>P8#CqGG5inF}|N5xM'"Ѡ!iy⡚x3/ idvE*q#5k,֡b)/Q CwMO))[H>bLͨ%ҚG?,ܒ)e-$u %43D>zy|;k:Vma[yVR*#`F@`Tfʬe&QVT]evmHtcdY xp&گ~k8iɝ$NF|Gƨ6_#n8g;yzçM./2Yv i7np |aÒbH5Hct뫙B.ERU嵻 ]׮L YbF[vEe^qDeZ1Ú ZO-א#p`a^hŏ|4H/*dr}KjYzg{B] oV;pzT Y;i2(m@y<9C*ϪsБvD\;2q=';@"krňU@/~ZG.1P9 v띰NFK-^»-ID@KF[]teORu^#ڱY6,%DpS~,ij:|S`G ) 㽎ʨQ ~$Si33Qy7u {chHͧx x6~.?Er6|*Sl>Q` r 1́DZ&0& XR&=06^Z1@ Xȵ 3tdU0˵E?NF-^»;m4 ;xͅUڸ' 74)8= ֍Hl."Ƕ qN<~A#&M$sΦdqgh$&dqՅϟa.E2,aji-}$8u&<+oxQ}zmR'ױ {&Nf(d\HwN},l}gZҫ$MA`;"~\")p?#QGhJ!`&i^K|3 cfNǬKwUDkl-QkҚ"88q1|ZH )Yv\*_Y) { 4C6EbA4-7h'$3`u9-Ma#Rhi9 ދ9PVlǚmH;E%f;X ɨм27,{`M>oB/"w8w*up cM>|.(CrUHs}"A=*_V5,+"`pVY&Kێ{z\^Zwi1.Gt/մ"+S4^61C~p©*{_H2jE4IV_N[55\ Q!"Es<[ tR\@گb̵9"}V24loUu1U^p3DljԠMD >늙qzx'9 y1o$Hq=O>{Vd+pz~T6;՝n"w噤ŔhpF(7Ĕ-\ H?c늹9Y|شX2iL%Q{X2Ќmw.&Ct7F*Ι<.÷ԁ ፃb/T. ~,R_)X VyH[Ƹm,OQCSu]a5Hnϖ Jx&hb-,:h GLR͎x?ئ@n:]Wd/+WB1-إpo.?/'֤~;dp}8A.4$cLG9!"$9U)?DgLj`΀,ؘ w?:lI2[o7}}zp",p vq^v=OSe ZnÎZG23u*u Z5 @4={:۞iE`IKt3m5dtb y =Vdܲ:X_n ~oJ0,~sUx24*"77S6Y R QIpDiJF.1\W2 p\G:U ᫛rVo 'g䍘pm@6<*ISٱE"1eUFy8M9bq/Lr#\U$2\!MmTyf C[UdվS+/|; n;6(^@PWǜkDoiqiWe@!(>qyR<9S`;pQʻ6`󷋮pd6ꪊ;Ոն̧ n&|)| s7ΠC Q[(EN #\ PXl [?' :=yC&l huVmJIj LC (?:@!Ǩd& {m0E#vm[ 62l-ऴbG"f\.KRo+ N፽h7(&KA}Be~aYm + j4m}`TU'۷Sʕnwv\% xqi§፽<4==U[:C!ABzS3HEOgĪb7cȹPjRM DRC_5%QIE;i>rz['??||~ǿ@G>?-g/}^rv@); *(SD)I]fƴ(΢E, u T }at|"ϕuꓗ1G(. r`aPx0Xǩ,SGȨŢf~- Ck8W^5)3͛( ۈB.5)w6 ƶu$;Ȱ E (6*"! FSۯ0GU/T;݄MùlUx+فB0'WpqW1a"ýaju|r+/)c˨Jڶ-X8chMUve\E2HQ yG:V@Pz@ͥ_cUq])֫fNpHxR_'T0Ep `^\hi~ {|xy[Qβ5cJ|Gƾ{Ά&5<h󝦿}Nf/84;xlK^dnoNq)5*i`_PxT7N8ZB;+w(t]^(ȿϮL=,AsN] J`Ot bj2HT*o"MGkop;9;e}x.4v稚 et}J=R6)r"H1쪼:#k0v"`%\q' tX̽y|zE1WM|XXϐj91@,Eg$LȄV?jj%A3.IDr""-mrPlXd=ffcpe SlTg+n2Rr7]&o(G, ·;ܫ3sK oZ5jbN@N dďKaIm^-4yi䷤0Tf62I? 4KF瑐9>3)JrnD<Q9$.#ts[$f?BTqsw u|*?_^__}/m(2s6mbo퓱w8‡W#( 6 '^IlRPHMH $>"xÛ7T$D8w]ѹ .ѵӐ?pzdqӆ _m4<1В 'FXfԾm呢iRQ=|ID},ڜfGm1jъɶ$uZύ&6Zҹ8'UZRy1IE՜0^ ~q ]:gMhqVgzQ՜paaj mv XsI:&!@_N%mO/>={hxt^ 0, m7+^|1pXҮ?<,5.㺓<&r)Lb*fY+%P#E]qKԧM8dD.LRsj-{/520&4M^~J*VJ r-lHN}vsWi*.f@QA3f)0poz1>*;GYUK IJmy-Kwٟdq~ވ:i]3Xkj_P#xi|PKG-NN}_Y[MrPbL,4sjsE."i)DOT*0>K8.MDNnÖ L4xE'Jq .2Py4}nTq2 jDW VG?G5`h`(7rI,!\hZKR k w!:fS>}fifjt۵tvw|'.NS/qOۖӀemJ5\1}ZeJTL!tb@OQtɵK 0\q) lj̲5-PS@_Mm.pxB}!y1()a )\K`\5Po: %-ywV"FWmzd&`Q4FW6N6;Եp4NjJ`(K$؞P,qc !ENgabN͐;LۻA<ܔaޚh }z#X;iç1 0& `^fqƕY{#+-'SMMS|yWϏ$Z9peY>! ia멄&f㼌R#D2{ے)I@i8&cM)&Pc);AjgC], Mj+p]q,W #L D k1#3vocD&!y2ڷ >e1x Tʔ"֨F)&'ߨgafɩ2+t{4FO ã"QQb9x,\,\\9hζs)-91A=Dp^Q-8hJ6艕u8m1]u1bD*EuU5J/IpqL2X at'ɯƒҕΰbXJ^x{]sT.n@&撅%m#Y UQ1H0p";Lv ^/貌 ;:Jz:2×0YK*͎B/: r$^gX -fC%z`ȓK&dhjʯhb*TV@ITK"'S>TSSB[ /a 2l^t\by<pGB5ESk#-UMJjMURh`jj-^>{a꾱 r l4(g}ϕ𴫓{ baM+9Fym+)C㛇"qI9'㋓ NFzhMZLM\$*H(=!e~^8E/x^߉!ЁTcyp%΀KN2*!}|Ժ%3ȕ"tBM7IxXy]0]ɦSƒTBV1 []x Ɣ-4#Yl8tMF}\{ҿt*uP_tw!r1Q(xWne dVkA*T+]iƱC.&ʄth_5o Hưf 13Y)SFMsV}9^Bjۊ_mIڱn{%md[n'mw*n%;sF&~Pk mՉ\╱z۵-Sܷ%gm\1.6zFsL?WUQOzfL:r)9F,jI2[Vt^fn@iCQ )g/X6*/vTsDP=\+D7B$X)FI &IfD+'5y#!T- xD_"Iq;MCܣ%Z8ZZR wxlߴ(ԁkፃ/$l×O) q/ӏ%YEGdfnngEs;_Yw;U&;b-GFRȆlm>!b^H#R6/{{L:3`~oU$P(E 2NEx PI۽}&f! TK?*+9)5ZϹx]~<fܖc|]k9ӒwjRLSY4)!}xNF_8A1=nY&6İ!p9NAu aډYeĀC[c:aw`*sxCwɝ$#p߇tyx'vp*!h/YFaw3nr}ڡT(tLEΡD (S-ըv"EzvΔL;LЌIݛCD5K7מ£6 nJ{Z W1ZリT`_@xR " $>J0g͙.hY'l`]l ]{F &FY"qj|Ӳ.]tJ}3|}U,k&nk˟鐉\v0}]R-?_Ji&FͰxtƲf-yҟ}zF^{NEJ/;Z=wղ쎽q39:3S/:)bHuٷ,1i>GֲliY3-xM,;gLc0WYZ#]K$tM)).VR~ވ6un,%Ďg,嫘ZU fqrVcZL}{Q 9s%'/O zҵ{bΘHjX^o-ëPnSS-5$hک Hӧ_tyFz5dc]bb%oH54J#bd"4:3 hb$+#3nIŀWᭃN4' ;TΙ1ō(Ĥ|L=6]SVIOXD!MCfBeл6=k,B1fTedN$dy41 ݛ836r k+z,Bׁ]ZLi#D ZwJ=&j^ 4=aO<+ɯ3f E*>YneO<7~{ANF&PKl,gl/A@&1y "+~&&UQwHɱxHiPl8yl]( @+6EV۵Xk違'Y*u0gw<.㴜zIkhHcafN.fjXGmt |L:g=X+wȿ ip.۬Q=&a2K ґȒZگ1Z쥱51Qwakv-)>AX}As`,$I!J1yK~LRc$dP_1Inwҩ&f?%{HFE%&0f.XG2bz*%v% j1ъ{d-70bˆM"ae2|XK*Yjq`d,Cgzf0YɋR~vw6/*FgtEcOz99BsվhsfwCHP(8T8Ń 9xaǂw}Ԏ& 8^T-qitD.;q dP9C[Tw.x[ ׽US6ܬXQ䋗FeÖsz̧ǯWdN*YS?Ol6 C+!Q\k^ o4Ӳ]8WU p˥dƲHG\njG?rm/veL^#&4@`9$/&ñhM4d/:Ҍ2.n(}&qkm-ڼO3\rOت-R4%qk򡩪W>kƹ)71r%x'z%\1v$eI^Ъ|"6رs[NAwxs (Kߞ}N1N/Tġ8I#mߟqyݯR!WӊOˍה8(..qt?3A0%O=g0:U\)ӆXKMDk*kuvXHϬGbJdRe2dn!ShONG:wy]w TM W=!>'I-ܤh/fbCIn;Z2;AWDZ*}Q﯎dg*G ww#]V:$oIDj2Xwިv߬sYpύDr*6+ެ;mT.MFlB"Oa Ÿ3*|Se@ g֜ƍʭnst(8"JӅQ)cήܩxL(3yFHhR 2_ù)Ux렄GdBo}GZUhKrё4>̥ Gʸ2L~$i3Et];ͻ̪2r#C)MV5H%1~)I( !%oqRXӑ٤a8!/3b3g)9 t7X(4]b2[R5qMfD=b.0T;NUl#j\3՘n r $*F^o\HЮ J| |JkMϯU[z*gԊ<%*6y&[$VkH<]FMFL#`b]_4GٻSr\|i* w~J302 D蘜^7XPܞ{C!>{@ 2E*j+X2k.w;0^zEC/7b%ʈ \Pd- |#_/b3X/KX@}S!g_Υ-Kq_ I8)WdՅ_q(mzl͹84)\(ƚapooX YPw],:ӗį +aB܁2W7777W?xys ?O?^]mޮҙ:i~yz|Mx{^=>||Ѽ8O7?QS7qY]qxiQopy'/P Ѭx9h~.<NN( 5K\?>w{NSL y|,5\j z#9gv ilt¶U L!pZ0Uae:~BI%by3ҿkԜGaU^TR( ?`mB)JaOY=\_XOt)<)E* t"c}B > iam,K) C.QU #LFmRo|baS? w3,C0dap{<36m#4%e>}zreCU6,p[BԴ#q5P6os٨ |.dq2ӁIU\b#!* AbΘ3& ?CJH8M>[ɯ 1M&掝F8FFݪ`hU@@V#%ڪNdg3/Q/Z|Mvnw\X$wHێeɲ{s MMJ܂#UD H`;0;36زiUujM443)RY=?2$Ѧ ohV˹34#c`-VnF!׺lIf7{S9gm:a {>s}a3 pdD=5VHʎ u^k<tR݆iyϷ:eT^rS~&N|xVe|Kq 79@IPc%#2tP,aJTo v3 Gߺ3T|#cğ%@)1ip,;P\ zU;ieǚʼn(.ff-pE,^p3 쁉A8 -RU2 jpˋ^q ]a#AL[I}\6CGsBSH#61ldaV*oꯛ~&sAjtU ҹBep`5p 0syz&Ib-8+5=VD֌ ]Wr;-xd>/TOl_vb'dXjB=Axt2BȺ1u^{}6ZWq%33H6( Rd 7P#c=vS~Oa; eQ4PLLD!h˱ B+@Ҡ-SȠm*_\TSN["t!% dA19pwy:]k0iy [ayļC(L'PsyU:?K,sKZQ[Cz|ie+\  o4ydzPH.~u)!0q/E~To0Jϴ㹻U>|F}`*MY4B:{)7/wx:x^uk8'Ʒg}Wk'.+4CE2K:@ '`j \!̿@)Z5\siWR‹;hBx+,N HeD`$z/Z)+mBPuLt佦oOR?|{N/-n4Ie&gL봧ۂe9\{K]S7`r;*EFY2UUM2yHbofz$~ۯۯM;Pڗ֌Lf2-Q7+aΑ=M[/ʟӗ$v;XouWi$*e#]DK#\SbYO%QBgCYQ V۱Vs<;k=cr08b"gX3wF*lsqȯP"h5Fd5;MYgmj"ĆZ$"\P>=C,%Qʜ*Rnjʙ! wSɆ5\O kɄSt(# JÙe"<)H0'\Ud9=2CnSn .?T Z2Fk疙QOeBK(ga?22aCP z y??}x1V|f~!Ht>cT.br 1u #8qtY6gbT}OםJ.5%+LC/֋f!l&Ϥ"*nNe^s$%,1NjL=C|}HAYaC`8X_Ų%|j z0a1(k8Qc&h"V%!i<[q 1=J#Iv,u+xZəظʈ- U$ dP4j2oǰ6:hP@p yWB^A_3*h_(H=cev1\]Od/F̢[TVTOIMCVSVٱHf܇[ne{qx6p#oWgHV%qu +ϫ\N<#ؾ\$!GrU"X #;"Yq: [ʒԚeWҺp wHVf|̓<%3A*s}nRh+숙V~3XTD Z,I#Q^g)b#2yK2k`RqpeC(;`+7jYMV6Kle 6oRh}DoQ=x4.l~ &l/k'}|lW\\  VGF"(x "K_c[Tr)-n9+P @++@Jrrժ}@rў5Y?us}S.juNh9po~}xN?䔕OM~ >d{5o*6la$&`V"0&h0`^ryZ}P| GJp?Mri@U!b<, ;2(L9>~y }BG3\Q073QJFݹइ,*-F mrgJKp=F,_05|$ |?>"lM/>(LӏW?C=s n_F6x _?v$hB#u:!% Yi.ƒr`ˆP9A@%qo=txUX兵@qSp ApCBTpꈄ26>w+yI|ݹ=@%69 NЦ'nHxY!5n)A;OD?x}RŽ |+KVm} tRZ'/aסĮ&gjEGs/D \|b.co+N< q }Ҿoq}LBuw=]eQ\%ʛLvDSҰ7 #nOiV3A"RLlxTe$ᄆ'9yz9?D3SHLB+#Ri]h 0iE-6U]xQV\. BG]Rh8^ZҴAļ e .q[v} v-0jh&\Xď;ܘ%[j;.ϰVv!9MEq%hqCD8:)(H $>=.d[ @4q0" /9w-ەݚ]Ӂl0}8Eh ^SY 5ƊƎGLUHZSHc:cf1rT`Bgj,;b2wk|MnVu>\`ii8&yfK wt儀i!%عE§wkkԴNI2R {j/ J Rms8`fS&HY}r*Ba /)b3DxRlnR$lR\F!tI_Dswbo)!ZsR{yD \E0ۻGLR&RF@Ӻ mh 4^jÊ.&Zlj$OQp"| c/MײնHt- LWywvßML(IpūA{c?g:%PgG'2G״7,ҁm_L$Vo)} V44XXnєM]33lDs\G-f3F-53]G”Z oPaCB@?G.mք]x+9=t,¹Wv`09Zm[!XZ kgg&fgxfOY{T~N1iO!o&3E0`YfSc*Diy:,2Ӣ7jMV41| U8>5'B.5c1B(-P]6]s)$7 ?oC.G\zdYdLd1QX~+RcòYGH;66ʯ\9[icg]7*1Saiڀ03:yA+,Yqn0t2Yi>hnш|pag& +6~3u JNRȴ}ة1dE9M^chfBiN+Zn6,25 Q2њ[ڝ#''/-[yh"m0caé:P0ts lDʤX۸/cb_v׀i~ZD aRLIsiwK 푀G Ge71l^]+{T!] !_ 3O^iU ?f a}7AM,*: 5lЇ-spO,qb1we(H/B_|'~ [ &gQ8I~̪I}O?O[&BD35xU 9\PE :8&TPZ(HdR/6J]?M*AKtUچO F%rJC*Q9RV(at;ȗ\_57k|l05/bT,%a~0"\uƈ@!~tOrF`,٘b߆ݵVctbwfˁ]8Jd.R\H8;wWIlE(`Vf`jТsԛZ{ZX_vsw"# 3B1sOHF8c6Ou-Z,&cD lYwM7&;y_v);ǰ+\}]$Մaf~(b^Vi٤ȷ{Ζs|9)"֭THER| B$ccF}nȦ"2.sXjh?W%vu}! -VĘ%Eu4,KMI*b rGR™rW*L?b]lX 3lI0p #Z-iNRTlOĊg:>o[e"f}$ :YS$cc fߔ`Z:S%P`%Q4u'2!:PSAEMҒzd1~Sw?f͓m$5ZgW?Ќ{篏,IY^>޵,,gE6p.<Wū! "'x6*'o_nUR6Z X^n;64kTPmۿqY6+m5Nte/ vwO*JN,v^.)Ncm砛G.oO*vLr8کxƭ'Cd& Q2VMX,"SCJ9I]!Q5 4(wئË68N 3ˎ> &45K4L/>C3oDt UD |oWelR;#@١S6i*+IE21XXˇ!ᶜҹcy&vO_I(gЏMT $™6 ;HCmFX\VR?wE څRoVCCNcZM'RQe1_%R,WDO˫ WVQS|}OxH71&BuC1v39;?8&#MnQu o7mw5SGb5~PR6"z&Z(wM1M)gM)vĔZl=HH2C[ZQ ׍*)PXpt▫T,nn\[,S{d_ӫ,/ #ToĥTd]Ôd y)2YFki1y}'@{+8ŚdZg&4hXMJSTb<¬Y߈i(MS.`i<o{{%Y^r߲AI9"d7`ƺ  ϡ@Q6aN#(E(2ch~z*ƏNx߼{|~Ul)#\~&NxW q%<ӟj؞7܌R7ci|M@T󟚲ں6m眪> }"^UsX_WV~Lߧ,_4ُ8O9\O-?Aڰ) 'ӛdBb!16Ld<vB)2H+Z^KXEƏ,SDh`U+Le$NܻB$1| 5va8,N`R$ֹy_{/z[8{Y 3p'cCyGs]&#& m5 dV5pN>\Ͷao]ĞƾzxtVu q˩ӭk|=*Fۍ!Ȅ_^5a`&\UR Y3Rg$xUoh\by`Un2{}|ErRa [om$_ıР Jϳ:!TmnCFǕ,-M@NfDJ߽f7S>>K\E8H7{ہ'x.%,q=8)C_"Ŭ4f#0?xbˁa,m"z+Z"?j5r]ۊϤ)ibú'4[yc՘t-Nc֒Ĩ<ް,Ίc]9`!n-XݖZCj[ "W0^et?\_^]__߄__A1 "! .↰ /zGIZX ޮ;ΜGۛ[8^+쎾y&Wr-aJ2.Ƒ;k`,gȰW% 7jJ1ua~ [ITʟHuP AxN\4=63DElpzfE]lbKI=G ~129 pk)jpFV\(!Y?Ѝz :f;Qg9*igH P Kδuj!؅)Dҧ-۵yqv؏*H{/) ~UE){-ځ%Hd"GD5-Qb9|0$:Zل8naM%vD3=։].i|4/ͫU}A-==hOub?!@OMaae;sQ8DpSD z4Q`y.e!E%+_WTɥҠgZj*edPeR"s?Hd-vyÑO˧9)תel~F>G^IG'W " 8Ԓ@"~Ϊqq|<$|JD”#y;l!JS.h əH |>=~ŵǗ_0Νš8OE<7{W~H[Nu~ ,En1Ġ5Q l犴n?57)lr\nXMmd2PX\ʥZ 'Rr\1 p\$v$#}۽W 1p.x^|a_Mva4v爰Zub5WVqZ\l/W1W@cC&Z-n}P;@spP"Dv4w_6$a93 p G0k2 ]6xN|(y )"qPJa>%`B_`nh);rwenϥaa![+PWgL } ,3 pm'ҕ<웮lxyR8\U/Wᭃ6;%XnI9R3B/%|8v$;VZ \@ tQ@k*nR-.* =̪+*xcyQ6:O_-Rp+ՇjIƦGV ^Ux`.cqR Fcw~ql+|JE>VP/)ڍAz44 Ј폞Dk<~cF~p|3+ k Ze9E~ݏ~E~EU>}A7; WCwȚh͢RU):кj/ ˶65n3{YPN늃ܕ,nC15԰$$2hvpAɿॴXCע:tY()bx̹UMV[)þa+̙Ex Öa(N ,[_na}LJ`?Z%ynD$Fk>Lw櫍k~{KjΈfiNn8`֏](?m+C~@}u`bK OBOe+q"fy*bFΨ~V5yXTD5\^7R?#K8 ;3V79;lb*%VuGrd~kפx?pm>p0m[M7 6ilihUDkMBVUfV0N?ΙO{хuJ6w1PS `QcZ?&BIA4>=)rŖe,`b.Ű4"t8MX6t_-酯^s 5*&߿c=8Ub-($ 0R *!SUt+Ru@Q'*yW$q"6T*oj(+Ry5tѾ&ڛߥӵ9wߝ?Ӗm7 և94sW *X'2 .sFHq}lB9k+=!5iCHu:i.Yat+ZFޑ[N9?}*}X;0?J{c#ͱwbvݳlɖALkyҮMڡi;ɼ49r3Ske|jG<;:!Ѩ;Hi^odMH:k;l|Yo4]ԄgiU5nM-Ԓs3=JRq'R5w Epr N<=i3Q!I0p | R<'b~ܔjJN6hR/&+N?;3L}?sd; LHIVL|ZU0G>z}~ slc4fyiKYѦ/ ͑'P5A%W|'m*0+N#FJĺ d~1 m_>X|T+(FSxoTsEWG ~L(m z[8ut^c8tWP\Tp{1eN0Fksdʱl#k:@v%J-('ZLE K_J5՘Q+閲1>A4??;laP"b۷vb:o?D{)sCaUYb;׫q_Uev6~ZNdcsyO0 K1yAG"p(իg2+/?7jIX\Hǟۇ/~_wKm΀S5*KR8ۥʆgȉnAT]d|D\"8z|.uzYH{0?*]҃4b"HHݠHl EkxB4jőT'x`X$"Z^ښ3!fO `o>J#+G)m &Cn0ePalF}O2gir3~ZU'wC5Pl;%n8w[_ eC Ň GvT@6W~?]Bsnn,Y*}L@o8uc8}lGKm8/~ ё: Nؠ)K!)yQt TŴ&=ϴrwFCVؘ1Y'|XFP} _Z[8JGKh⫾c|Xm o d4lj}1scH/xmD[C}~jRԝ#EB#'3:k 7yNho)t:,C; mo:k"h))o VtNc" b03ee9S\ē^Z0I`S{J$&crU4EU[M݅B̝ʮpi]]Ps%BTc8+ JL7AuF hao120kIo5C$^'h*)P>x!8RmP-icDj[iA1m!3dewV)yJ^_5#`K멾EW8 \1^^7@}bgiMq`-fS6ϱ,cnasӻ͉H) ֪#JGulT$s* UM+z5ذ#gE-?ʹ_R&8ፈ[q .jU}p3H9\ݩtU$׎1 x,.z) ͘5Z7s+lՠ'r,[Gޘ6+Cn8JpES nR\ 8V ΀u>VG47e8?1ua^FB) (4iG֫Z6,;FOUƭ uzaXjD5@opjku -leCrKGS>FB3wpGcUkiS'f9() @VIXu1  kZg 7婰{n? {A'' J\y*,F5G:jb [&ݨb .Lf̃s*@3UCi~V ُbtu4f^ai?]Դ3SGGP9r|MݽK :>,vuOqv _Z \+)UNSuOE0Z?ם-q,7t7j3[*ƲtG< A]fA飱~nb9WqyaW-W" tN#Hr0]Y:=|zgu9*v[G:i8iYy8Zw;P\v={Psrq,&"Ϙh!yZI`0~9,_0^%$i # \ e/c-|W\ZvzBy#N6 S{.śFKULNVۼXGbj'+It[{EfM>)+œݗ L[;5u$<(1ܿ=\KGUO֨'dۛ$m v"zh̑x4 )}㯟?x{/}.Ҏ޽{RU|NJ0#,l5VcXNVCOĢBQ# @hiqfD{Vv#Ko4@? IYUϪų^b;W té"飰ϔ"BUܓmo)M mHc]QQQ-h_Ge d]!R%!h(JC7D|a$ [0{s@`\-Z2y6v~4ד8zt&|sG^F= r'޼%8% Ú2"à8GUR`22O.|KLN@T3r$1skPyO?\hO}n,V|G|zR\ #Kdll (jbwwU&R\f+ `ɩI49*s"߽ :I vKezȍR8{:KIc3q&7ET dJ`=ӡHIoR{/qe6ˣIp>]iTKL[F٠Ihuzޞ/f9EgFdf:Ż_ Ns+-a:jN;W?|[y/nlTϹro/ p5 }aƋF(̪4D|w0uđmu?I4nqҧ;'lдű%jFfșO'wS`[ 'ԨGҳ c$(Di/7B" &ťtEx㨔úxL]5zE׸"Z&):ǩ9L $AvXb?n⮔EǚP0^۾B fzg6YywXy#1: Yi3N:_騙'~=ԣXLOH.,Nqϫk-u]ߋ<]-v/UeF4#b!Ĕ˖~l3,lG3@%N3VUOwhpa:ztԫ/AՍpghNpLs$]MY \(W^7[vi(.b|'DÇlɻ ,yp\Gkl֟{98*(Hq_h2do?aoFQW) &~KA pYs 24@5?fC&!I,]REZy3 'm2.qp6ǟT ΪWQ2㷕4#^EdVagNlxn&ZN(%-%zЁi_([2[*,:9qøLX Ͼ%`k[!8_y`epͯ[Fa6~ܖ8~o's֚Vh5L&QJްA%e"8(Xq7%Ki,Ge:J\En[M~~Tp>Vb#n(ED2;9۠Eq%eْ5;Ե4B@Z4yPƈp;>+P;pJ*-+AG gO*a.r$ Q3X#4Gvc=8{'ۛlo sjx J0s$D bʍ{\s Q4S;"}*d%e۠NEJ@6 G!!N2?jTg҃Bh}n)l밤:Se-F߼vys]` /STu`+þEmݭz_UM&LBQ2k5p<~0K(븆ǶY(y kӼ4K*vҡh?pjTJ"츫p+dYoa֠X{I@qwAᄋWcAz -&aa1+M1\Bs)VJO +uE N%V lbI`>;ADࠕXY?HB%L E't\%a2֒3p e0`|.\U}Q9n0,+-oФAFhOn0КspaCa6J^CE=%:"WgX./Z$-z@ ^{x,%wW6?Լ*m -BoHX&R rf:ћ<)z,Vhһm v 0g'Ke!qeq|M+`R [Dzaʄv'drF<\l'Wec'eu$tЖr[:=fv!dSKKfZF:gO$c 90D1ps\w}rCƯ 3@ j]%'n߻JjJV^hru27.l{-Lb7 g3a07쁹]k=V`2c=Z*E?ȝ^$w6sFvB])Q <(ipx|.SMb=3D2x6}yʠ/J\!ƻ |erż 2m ¤qXL}Vg#Kv]D_ WAƣaWzU.,`@,q듗z[2E&0.نfH.JW%Sl6y+N`x+-TWj հȼ A>՚%ubM-O+>xoa- ˜ C,A| \Rh #>V7bvk)`N 7|]ZMF!h}m?@ї|+ˆɃW_A*=-.LgBYTA P(14[ rCa$3J9Rt 6U Z*\mI4]+o <.y[tO$Ux+CU r{s>CV* )8[U2/4D8SVA<} 0#JhUEe5l5U" ]ׂաc[a#Zz MRONUcF} ^/w3w&ŎpdNneo){J;\3YRRM@62nW2<+v ROs)Qq옴:T(w&<%r[d/a@!ʔc%[q<؊C2 ()o+\dv1U}Z\4>Z!&*5mi! 6LL[pŭUXȸ{.}NQX9yNb{ ]b-S JBHV>8;1ã+[ZBLc_RDsQU6||103e BNp<ϝNRt j,-x8T/"fX)NZ`p4y8sۍ&pwbPbs&1/'?wX>(Qق6`iKD ~rstMG[s,0\Ԇ3b7ےE?tlb3asa;d1y&1Ų*5*0k 4V6FL%+ZU̓ZL(%abĚQl( (ŧx(ֱP22(~HU#UM6F16vPTei"iKv%Sa%,c4 넰vXdO\"y&Hx$3 3g;,oT@1C Sv 3};zs, ;f a0`azwxIsB"p댌BO+BCN4u,~aKIPtĒ6efږ0FyowϜ9&#~]ıkq&`Mrs]q^QQ46fUm71f 3#dƦ c/aT1FƕNL$A}і$vc\~Yҋ({TMy?1g!b& 9fUܟ)Ocsh^^_虶rG[nn=M4lu :N:N\4t &-/Xgct UoRz2i2 iߺ.ܹ6(.݅&"bNc%hV^;`i ; gn3Ǿlʣ>MvϐA,9M6u&/LYϜ2OvpvS8 gpDK쬯ZEJO !w0`uY$ŬBk(EXvNلąEZ4"372aYJbHZ:͢r6C$-L\TsYŕǃ|9\_N!x\0 s57s "XJ8$RFz(z@yL;ZiG:Yu3wZ#NXsLUQ}'76*:Lŕ>3 SB!]3;-)(4J+g"~N 47*./5P ]#cn6\NB5wt@ ";zʑ<֌*ˈcYeXgkv) vcN%X' e(T%"A(lg[.SIRDMA1p >9eq[,L&Ŕ/Cy+BZ%>>)`Jk{&z(8&kX k V1uILCdxU!J2d! A- fڞn6F1KvT3 ܰru2=WRWug,5VʠSe:hsRze˥fd>q^i+?3es=3c9;͍^ :[a>| .7Yk{ͱ3O_LȊF"Š^'WB-%_)S|1ljP$<";pɉv](3rT3\"{*:pipl? WspV10];1整qGZHbO* LcYWJɄc~7pz׋\楉Ab>CgC6Wy֏h[I25Ck`Aɘ!h3*p)M^XU +_k^$Eym,a;^~$lRLpo/͔{\Ul[mbpL5XEͧVPX<,oA߮oXYX쵐{*h=gf:J 6ZH8.W*`FV-Pf/&ޑV.]W ]NxmdV?ʹށp(pd;pa(.)w/_> tkZ{8]Si1U PysY wk D-~RBL$zN'bVJAy4>_xJ=f`x_#̼3*bh+xٰq'[Uw`,CtiU ]t'~At' gB| ~;@ ᢽkm{zFT Zif>ȷD"By<ԄNVgu4ECCjTdEw}У>M mFmuc:Q`2(wPY}Pܖe$&),8iT옕maC;JA1 nR:Xppm{sڛlQ 0jbgm`SsJɁR?NEjHS8!!{z6؊ 9Jܗ)< "$+jﮆggmapgxԟpV` l gA#9&3q &C'Wa3_^pV.K崠B4ǜ?  4b39;YIjUZ׀ǟlxhHǹO%'MA㚈60"Qy3MxU?e9U(]uwHV"Vh67mE\/,sxЈ j`)9w p ƬYhIFP] +H"澖 q.w#I Xˣb6ew: 9R` nxvbzxQ>RJkT]ZiK ޵F73LX5]^hfm.QλI|szy*<"rzZ` 3ۤ23Vӆn&Lg];!5Sr% RIkBFU ,Ls\OZyU=9@!>>I4D `I]O,,ICa0ZڭF OTO%*JeB`'89rYyQ=q Rho_Ycs]:ڶ+D6Q)sٔ\.B.Rp8wQH'˱ n4(4bRfǧ.Ms[6#\@&~SLra'y pȃQ^7!CqYG7k[ %*xm: `|A~ITymXw&Sa)J5OOTإ̤SRP"ω^Dt55IfC 6 Ħb3ՒtE}Ù`y/9ra1^ S5r4ġb;j:,np\(8O]B @ؔE%~1!|JXD!n<՛yJ,,}NH ŲMJXVIB㑢:V=LjUU)3Ip `5* Q RZpXjs'%y*}U܇qbGh؛0F=?o]Ҭya8g(y$]{9iGiQL iib3MʲHZRuҀJ\ vW-?'xWbpK!"CRĔi3q&ߦ#K yVmb8zҔJ kCM`ނ&r.uc:RY* ^ we{&08" Aw4Κ:kΕpz,1<^>zs mBw|?~g-O&eVEc}iY\?ZjZJ!LXBOj0y*沚Z[愫 p˛y?W~pk|9r)=d.ߒ$$&,㙉<><|$ '"1=/};Ù6xt~~p>T ׁe%QV'hWJ3%H;=0iVԣbw?)x K _ZUӴC DŽ~BB)]I¿[*u +rl ^m, p$8=:ݶ4yu,n{[ 6Zu'5u+d1"4frnc2IT&@3nLRDm3Ɖ`Mo%߿{/D7Sq7쎭Lo7SfG==5YToOv?Qba ͷa7UEn2{5כ9 F#І4ro3mi"v,EF',e3[w*o^߾_zJ4|?CڿȨMLnXؼly,YcPC5zDQ;)CN-q2RlW{_xN+«z㟽l4(ʢq:T 炣#E*u˩h4.ڻy}|EfNXs v--Ss[.v<1/6*5^:$:+{ 5eDXgMT+Zc8  mLEvah 4s6,2󷻇kE}3>UX~VX_S\73Gt>yIW{w?ݟF8&w~ktbpu.'xE-y!fW'd<ο,= -zTȅp#2I؋.DǏ eAŗ[o`1b1OBg8JGk#ˈJ|Uw{K.]r>v hQEp]݂eMc$.zRf;|s1̓rv^C\dU 4˳$pi Amכ$zGv }=%X*o xYiɭg 'cЇ?RV.%E/IcAݑbUof0^_H AXs~%|ˤgVSc*lDか#3j1񓛼H茢 FQZ>N=]*m)>Y8U8K﹓}rIKX$tb/5jUZmo޼VlX2Ǧe3N[*T@MЛZ|Sq7r7+_؍dgf°Φ5,.յN]$O6x97P)-üy3 B;cf[whŊ|FR䕲ҟjcYj;Z3/A@0,/H9FRI]\?F5/'QpJWTOvf\$-uZCxMDTWF3>`d`Rm[i=V^%;$e4ΐ4Űd"rvZMe O9ɶ#EPPfGp Ųj%i`[^OhK'Xmz b+ ?RhI}G&B! &#QE^qhWgI<dzLc{`"X1ܛ&@['4rA#j`95QJEt"sNxNO7t6KzcԞڊ#=(*븤հFW.\p䔃`N/aPe];B ?AD28{fFxqZ;S M}|ė jl> . !EbƲ'z qt_:Pc9# En9yOC|M*ɘ\ Ӷ0vѣ=`qkQև9p2Cc1[7wgsI q`Js5EȻl5[I*Aţ!&6~RwGJʍp4S< ›N{{3GtQKzcD& m%Kyu!(;Vi u,'yq-9¹;bYu[ʠI%&-Ku6W ry3}H#*2>Հu2~ fX5-j2% ,;h<\@}iqbם 땎8ZnV9gA(D30C`j32*l|`;wE$ Ep+<;('eLr )TBSe;NrY h@0}t'L U9컺;߿pNъ_7Ҿu㢾vio.. B`n. 3P'|V̏6>[n:y.8z^bR{ؖ"`iZh K+j2P %O{Xh\U;\:X G+s{U='OPTN,4 R14wrb؝(acrYyb;߀07P-<@`)zU$eՅ:DƇ?&3T9 fj(#"jC%ӕf\9RݡҒAfb|1ҲRy3oB/G3ڡϯ#M~v.gLā=_zs.6aIN{ e<2ۭ<#O©>Ą8r>?">aÇrc{iq#Mr-[Z9k"[zb\sGKyT"]k]Ws> qL3rG W pG-M/s4g,w[ҒY{i0w[3X)S<b6_l|ZfPd>AZefei)0Y`u+;+lm 7Dfcw?!wmyU.=i}xu9"Ӂ.]p53p3^0)ouYg[8sBgCJ⢔ai"bY}0ĵJ(NQX nK(y*,ʪ5$t! ->%8RiZqD#zwAae67Y] P&%"@-ݺB]%w\Ha?s]:gDAa8o?]٩3dcxFapi -0 T 7,2 UH>VH a(.`Xcs JH&J ",Ura(&ܦحriq}tTw§M$X^4Y QUG aXCdWf8|9ǀ ZG6k͆%J]`}T9+ c,ޠ4ÂQCxNМnx7O荁wuzrGC}eFOפHdlZ|\l̹Gݦ+^g7"悩,; w#~+£@Vr[Gnk4 īEڛT ʼn;T0Μ VDב^/.9YUBzfr @vFơGk|X@֓F_==Hn>كvj'0w_or|3c-Ez,f#)77P;a0 .e"Zp G5 <Ò"٫x%WWPv$ptͫ7ׯMxU8q} yu]7T:?ga=QPkZJdZJ,SW~=>H 4ґK&WᝣOۿ~7o_ózy=$'hӟۯ0xv5ċ1Q( tE RxuH'JP&,GpS0mʑrjHHuIn[K }$%,yXGz C(@݈OMŹ"={<9aZ(i3jE;aoD,E.ENcRSt"y2 4ZP[8^7vZs}LDzur(Bp*V >(#vPcn?AtViXc(a{Ds1QzD5 sYgx3W)Bq~bnup6/4 pјzQ_ѺA_u&*aڷʹǖ"s>%둶 UT1rM0w'eu<=?~x)m=8vKp3Jffyԓ&s@⑘ SE3R Cڝ=9XH &xcߑf(aR:Ln|j =V Ғ+¨NI&I,-59X0hZӷHX8Iraj7:FyxR Af:ظWaDA J_W4D )VגLmAyuCǐp-!1F~~ՔH13.疎zz+?a>ΛO_>@Ft(8P=g ͸t5 ~s(f^,D5 Hvs c%Mr,wa;))613J5-8MY)`-:s}BWJlrWmpNX]ۃ uʽZb){=Rg~9GV?q1>4e[}P͛ZxõUGS3ɉ#/RG)ܙOo7nϧd:O[֞/=#nnyfˎ0G'N̲#efƦˎlwtq!%,;h!%v%t9s:=Đ}U\eGӳ+>xxVǜd@bRjٽt9uD=~E]˨3srePyEMĤyT7y8T,Q9jL ̰ N5֨̍R !T_ $5Z R nn*w,fX&)U tDI! W\NsO$6O>jxYU f3mF' O?BsԤ1GtC3G]>:uFo8 aiz DWn-1Ѱ!šQejLFUգc ϱ)<(ŨU%J9ؐ8,ZXn,kؓiwOMbV5-Rޒ_ ȏ g j&8.i]l/dFrUT蝹h\E4Q#XZ$LnNe-֨Tx.Lj"Tv>G贫J&aVھjYS 8֬2*n<)oDdmI#q&qYM6GVi܅`bqSWCTىE6:M6Žp)q90 눛_ $Jz7 dָ-x%.R&ٻ2XOw- Ph`\,1&/N댨TC)1T РíjoPA@(˻e\}z;5NrHXZ57܁zҁ!ei`L:p~ﱁ!l9&/,[fCWV^ՂIo?֎zdRDw;"Ubi!ZfF-Cy7Nփp$uhW>&MۯZ| g殼tq.la2bs=`NRḗk؁ ieA,j%0%+^(<xP2$ x2ݚRlo,Ccd,Gyzj[!ɆuVO>x7N|#Xӛzފ(Pg?z8h߯ts/||p?mÅ}%XhQ~FİvnV\A(ڝS=h`ppk,g#96='WcRo %P#)}cpҥR78׀*5o QB ߗvBtq>ǹp c R"xFo_2Şe7ٹG3{\'MXq[^}DNipCKmwxgFv/XBȸ_Z(RمDv'kn>}N!Tţ5V[gvq.Gjo2C~nquP9g/kR {n:;B뵽-miahS FLfKHd$*CW^C/b-4?)n k%rK&ڛR8tuԠF`iGO ]*g-$6wrC,g @GU͈81YP0iAF/Y)(;KzKĥp P[aW{K%LG |]nAkFjRvG6tN7E=d:+E)z~]F-rc=P;ĕx, +T\\2KbۯgbbZ̛p樔Gg\=GvI3bXڰ 5Q@8_h*eΩعQTq {҃,P:%(iyPeH5c)Nh6m@AQ%uHBaxƴR(WZQ\` }lzt!::r}y8J-RñcR{τrZx޴ʙ6sGs.M&G؟r4P[5T~+fۮu/gSgD9QJtUSuwT-W+Pe-4\wc8}BālGTs{@!Dci u8jDb#‚B J5UnI!d[(RROwBwN!z1(޺bN/)xހGHʛdΝ~JY@|XU/ BҤNaR1]9rRK%fE}tqs[d*-# )aHp:2l|¡;d_00~c~Tk=Sb h hܱJ(Ed쳴ELb!H;wDafYoI]Au2A$]n굺I;p)9"0 a0./X#M4;& gF/(':OP1dMQ۫˺M&ΎJ59([LYO3]tuQ(i^K6SGe>G)HPF7Һ h|lF=Z!i}Բ杰:u njHbR2 (`&J5AA"Pgj^164 :LS^}z]uۓTOB_(p?Ζ ql:oz3$ yusJ3t=CL,LE\Ӓ^~Pg9nc;oVTU4BQ? bLn&*U*@}zp P?W= | \"㯟?x{/}0_ݻ/ m&:%Q#]eU@AP9 e76:I^4Us p{MgDsf"spIYr}cJ4je?ݚO$2޼}s*K ux*C{j9> \[W^csq޼>yNȊ!ZicѫQ]̶ >L]`ZV0 hb Nl/s .L/l)"SHbigLw$rx 4/Q0i:_X3$('gǍpYfup é"quvg mf-!N(F$V}xg",1;N`K"aPPfN:`AOʹ-m/&;|ܻł.yE "ҋF8K6pSU1$Ĉ:)s2dy"#,S0Y\T0c @*s *.t\7}aiƞXZF |\9 Wmwh)S~ WU}]h9aZҦgNx}7i#MّUaQ2QADF+s;,F.Wj;[7+0{#6|{:e 5ݠZj%r[^ okeWѻ*= Ea~j)9^PH5fIDhRM݂LxAZ( | 87d>S4o"Iu1 ;%a/z F%RM($O! ;׉_{ؼp>-[iOϏ_5Mlr 7Q.{E' (4y_4xin]VPygSGa(/GL9H(\\$jU5Oa:!>|Ȏ5#rOkʔ<ͷf1ԩA)nI7;YM+3KmRªw^Dݴ>i0|bذx{\W}Z?/ o^K1ǎ]73R0ICOhFbKj iNݵ3ql_$7IKAuK?uGL!R9S@bH:s4"ĵ9yd$d]ӻ?LZDn+ 憅TTAl`c 5Ȭ|c # f)Q3h!+'5#h +Ba/rZ.B:u|(ڡR2YR>(j3/PJJ.6zwDQ$]I_~-3$,9$oq ]r<^V|Ze%L.c]Sq`ڈpG`q.56)r7ω$a7eb3:{Ūu<2m鄵aa\0BKn"7ujbjzm T׊-h7IA҃16:Bo{X\zZ6{ ң6bܗ;"Ɉy]ff;!NPyG ut1@\G"L5R9-k oHYgVC[ܫ7i(0|GԆG^ϧTf ?!zi=dY)rKEO/Bkb-C\г}GQ*Eu<j'kE UdPȔG$2exEͳp%p(G8o_A)3 6KaIȖΩ3M88y!d)δԚs;l$* R Jᅧ CsUw%reP|ýs{Hr$Mv|IPkjT)tk{Ee*Qeí~H:p3zg==FǞG0w X$iNCe:$ښ6>m,ymػgnvxMmB}[Q0! Y`)¥>{F8 2g夂ʋyC&t Kw`[N *B&椚JN=?KJ.7j(нk;Sw9TՄRayu]8Li'KE<[$?YzޛHf \ʝ @$;rmofSTD̽fp ~)soz#njX5T=Stg4Z7d7v4xW %P}RpJBXC{.v‰[D`S<ʦm*9C݀$RPc,>\(W,(zXUa3+YH>Ac8ez.82N1, (%V-ZL5r$X9L#xrQtkQg'lx$y(\%aUȅ -b 4@9Ns`Ir_8M5STOU#LZDWzTOV7} ݛ-/B3"c|x)Du&mԎ.UfB4L4t?,dL1vChȦ4-z\._:ayˡ.oa ')3j׬\O'ۀbjZ`&.QĖ{ Ձ%I$:~F4c*@|F'++} R?CGZ#Ȃ7Ǣ)p*Z=dhCg4;;2ќޏ6*K _Vc1Kg=XCi[xa1*(ӟbcM\\:64M&nY 2EpdoVvWEӫ&}'ܸ0QUWܨ=Xkl'M&T Ơ^q CD_4qa =١V eڨrV1ԙQ:[F#r0]<ǥ{ٙ%Wj...k !ۈߑ//w79S/-r V ׋؏=^_\^\_^]^RmRě0rG_{ jkBI6 CkwxC[^gzNn|g_ÏFz'Ԩ%a ϋ,~$fe1~kQ'ApIZ|Qqt*8J%OX>&  /hꂫw6qh o%$2 sy Pb"e’=ڼ@IAAiTp0ZY5`8Kjr-U(r "aWp(qH(N׏&uvqry@$⤸AW 8$;Um#^/:@+#U,`8 RQ:V!)@fJ KC({Bw#7ߘ{"I8W7{ 26Il;D~&Fc=N]71c$\ŧU1t~/Q,&pCSO.W;ͺUP8fׇ}{-eBP@~C{Lކ{,l YϿlfA  U `|H)Q eQ$UyûyV|Ubele;^!lB|WK8DVJ!CSl!WjEAڞr;"]-B3ĕ2Jk2J)QyL,],aRE|V[t= gVtU7 [RLҟ>?~O~|?dꛐc2 V6B vXy[M؊ `?&XZ"``vTM6`h&o4&8be:G2娺1:GUGB˧?&X~t]o#'rV䴣~wVrjlw[fbTĈI_}H<н/VlL.f|-bX8,FݧG([m kQ,zϵi#ZdgZOϴCϢXձk7YUoVxvYY̑1a0A*'ä۪ %646ϳwBpqM&-WB‘^0{07?]oʑdq]8]ϲi@E/z ܴN "nufmn܈W=Ĵ4д{q(K.q'3tȪM±=癡d5"*}U_;Rq; kk:\$"E|}"STMT"[T={??85I\GΑ҂,$&&\AЬ.KBtVdK%ngU řz{H[ FGjfEЪ#Jwn1aFe01jP.DNIuq hQYk6 02he2yoB xBl %`ˑ)k8|y VtWDriF&A\]Jacj8+6Vt+qsF]$FE^N3r7ps+u:o5s?6Ćx[./B@C"F1@$qp?VM6C1$ P|r'8ۯVӞI, ^D2FFr}f|}xlsTFs/%ҫk^o'Q بUva;֦p(]AUBiGLJ Fi^`OtO^rB [$7z!61 d(Yk",i!s9'pb E D7)98o2RhT`Q h ʈơOa㶆ai؝,,GzYg8YX8??hV%;VdXBNV#=Os^87~0(&罉}j;LK!W%Q-pCJ'suiAoddU ~C e̳sX/_-V3}lP:grA܀Hr &S?M vňrbD`JD"C8 A1As?RNpEҖ 1 ҄=5Ypn#nQg;r[b bjͭzțT{ NS#S+لaQ,nt&‰ EBw뙋U7|p(v͒*ֈ`M^_M^(qj51Q9UZ0kKmZb&316\=d{ƾ)`X9zăLH]R} cHO V^Ju*&؁Gr/h= {Yj+~3 :Trܵ&oX스e=ĉlTGZFOwO_"?jvX_T#ua&UEz2shBg٭%/ -=8ty'x<`SFܼf8W@y*DapQ Mgcgy #׫Ud4 P$~S.˷Z\"(ge^4!F\ !#6;Ԉ$|b] j>-K _؋ko sȹ(^J{6Kf^g苅[ 'z{Vx\Qٮ# c 5IAHu$N5½fۀˏ8-Kh+Dߗi8,CCWH"~}v.p"K_N^\^^ƝzuyZ%*&^Ng:ݍSqsg*8}v8b XO/9/ᡴBd tm<%oJ|#؟__;U翞κ Vq  cHd#-';.'ypkƻ|*=9gIl*%z+ND, YZY^+S^䃫泲t-s8XsD׏ST5|&4G<<!'zT w@T&pG߬7,i=Q`H>RyË́T4r(uL3K¿=q!Pw‰Ns6Le˚3Ȫ-Jԭ0bBiN.롿aU QOKxeP!sF1^~D)8[Q<ʨg(Z2͂c3TͰLd}԰C{`Mpx/q?ÉP5*y-Q磋)g "gx@:W%%G:3{η? +0"(E5|~`33}^+L6xuɭ%vӕhߙBj߄D Ї9A=E X6j֜!V!i 0Pk ,rRg>NS#B6YٮgUpjӯ>|rqZhFڤEpO/lڊlO?}4E}:Aps! ؞ apjx8XINYnc&*h̪A?d/rxQ靀lbHTm̲bdǚ:*J/⠁@WwF'*h W! r0VB,J뾧O]Z*ּܲ Ctp5Q;V7緪oMsU4j*h*Z1ʆַbAA%275C2Zژ9!6$U I,\P)1ƉvˠC=0>%uZw8&rvh?kum0ZBY@XPI{a AlG6;[]SIiݟJ Z%kpT&27B{]sy^7^yz"Cঐ+Ug9[Y$H0SBA{W42>?2%p[P7+DrKq@kt4D`3\>&DGng93&QHx[x(REE @E T]S nQ;Ô7ӓF- gw|>'Ȇɏ51 mK1sdü  G1\ng "w"wU~r:fs;TFt =2 ; LA[6Bfd -bJ^3sM) HC2?#sE6#$VQ =rSbh8"!~.*HZH$Ft*1P'' @#[@W~2=MxDmgܣf %m6*OLChTH +vJZAQ]:7@($G}h'NWz6q`S@>D8; ;'*>D_e Q.QF^Ph@#4(/r&u2HF=UIP !y$4 o6a8!{0GL)[ra/#9Tdv̢e"?Dx^:G,(8="tzif]00qW`w 3iBOjg$EN 7~ =D.Az)TeE;\̑Z=3~uzq:tѵ|?='@H}uP\ZC{Urȑ ( vBgx^?W-j9 FYi-xFa]#vE%i볤Ȓhv>r(1R9pA\^_BMV( BP:k8Yw)Sce_y㞟3Oû/q v `݄he7__s^ƙM-h";4Wd7*O/K~N^O>xh9d :N3|112"2;]*LwrU6ß+z.'\`PP߾ =6ekqNq>Xu`9.91`q 1x"ZzYiGQLׄNMHoF-u༎&?stC,rGK7Uk"~xNZdCZ:*:57F*I>R ccKWWWVQzZOJQuq-TkUFA1Q՞J^;┇,(A)L h;ٝ =+(Z$(tJp9rm"&I(qp.0BDpH^!G`$y&e v@AuOd1N耾@cyCD$XZ@PM ^Thfgh(ޓ .| I Ȓ |v;| *t=.Q "y Ikݻ&l#rgDB_Ƕլ仺/^g:AY 17|Ekx#qeR*f6Qm-p꽋đ= sf%$JV犚skZ#|ki.E@SX$;\aRr6$^D%9%*S & [dݙ.!<}GfI&ԀXPhpߞF{D;pF/q="@pX[l_ĺvOdYDa4J2Ֆؾ'I:v0o;(42]\4ȃHKvЀp`!C$䁁 &^T C’ (qdpӈKG*SK`hx*DA7&dAhm4pۿ= ӹ|0H>;Π%O{T2{xՍD!oeAmg 6zYbm Mt"/Q"IzL/'zG8hxXvO złt]X`r6:^^n8;ogsPKk wzp&/7槿MZꆶF_%3_xH:۝O *Cd)k啚#=@(;΋KIs"a*֊D^;Twa#@&\e+1/!w0I+o1d+)&ɯPDDNy$d+D1eT뙑sd?[ً%-N*ZI3.w" +Faw0¥[߶M"E2Jn'=U.H|ۻ[=ʛ67ň0-Ɗ+߼vaǒݤ=݆vIe)n<JԂK'mT*`D~N E)mҞCq! 8T\yIBqQo~B^*r)>! ,#F_}꛹.Gsf48 G$Fr98)v '\-6Ain|gUF.+V#ⷓUeTU6 aJg|W:_Dbz)~H`A,&ePhQiI9 vg1.ўKu@(6u1Yx+>, "^$FADB|Ty\L֤D%$GފY=Xf^DEZ .ct1E!S4'~PgU++)ӖgK2b_雲L`NK0| mlNw[`c\oJ7ޘFzV!$ U٤8ʘ6waJUkseUQfJҢ A>b}_YfRB{FQ=AҴ፭L ZcF}p?rtfi:Fb:yc?R:WYq^ĩTR\&C'0J\X1G$H8D& Zym X})_ Ǣpj; 7>> ymQ-;bDf 6hz.F w۩E78īaqT ΀hs(Ǚ{U8:E0ൔk@ R!v$Oc&`5YvZdQd}jp[}')4p5jS0gmǶ"_߸l' 昍MK191=d@ҢVT:Xt#F_ǘyL7ߟ2ڐ :P>D0m9aF$)HG#_<y{@{pn\Nͱ]x{C\ikT9 d² DSı?) XLpCTl{rVF,L mqC[gQag[*`8  SM V 4!c E 7~U dua*͢<=EhDT &)Op"ۻ8l;(DL4R2E<& 2#,\:Vc镤M1$P6|-k\r"!3v@>+<ӕ-QS.V?Fy~ڃs{9 !qAB VfY#th)ȺVܸfmzL%s$_](6bMA8{ J`xgg80*WE]OLSsl/E,ZsJKv<8R[,8O`)].6/pwڃsɒ>1CslDn-XM|mLvnvc]S9877d PFRPnX*SS$  ;TIZ^  rLjXG}bN'@s^cdE^89ac\n`NIkOTc#9RٓXJ7cV M,ָCܨ̐/ kФ_\t:Ɯ^ESRdQ*T/kܘTU1Оq^H .L|IqM/ڲ ήEpd"nMjqqE<3Pނr yפ<!|#HHIp.=USH/=# \j ݚ]@`CDT RL5aA|"JDB1⥄=sb?"^U2cC{Ћ)ܞn6آ:4ɗ$J`O犚ZF0 eJ(pA  7iEfJ@A,3uUҠF{/L= Jj+h^$Oߞ_ Ѵ63(hԸ ";.BaWrXX]Hm+2HvG&-Dm *&ڵpOZsT/dZ0Os7N)Hc"/Pυ)C?X>9 KyeVAXHYZuNjpjŽ[7~(8.qQ d<;Ԕ[d*eo8clf\XXk'U]O,0NTT-p`=fEɤxw-q} vzɶ iyZcP,Ck(WA(F N0h=)GifIX뙱I zgX{.̆pl|^I$~HUobDZ8+LJph B2ܺ9)>eoe]& #~H|Mdm\@K*ND ,UXeNuW.#*t!pbҢd_V' S3U"qmiwYi/(\C?C{+Eކ6`vNݴU%ʈ<M*Pռp%#qiʍ;57@*u1t\@-GKMrE4ETE]v*"gPY%8c Ag:i\\%88J@C{.v‰X1.OQLv gyonVp1*fLN]2|y2-jgҲĩ DV 9GXG J/3,=+j0ZFP_ <ڛϠRk5ޅ2mpuܒf(5‰zޛCTs P&"Q-ձ75ֱ "MzL㎜[Yk%1dڟM&; u*YN.~w-Їz1@ y W+KG~,E2rڱl,Ʀ0X[ILzcmOG4to46QNDҖ`^?zG[ĵV k&;2cĝ+=XSzvbTh]&٥(1]}4+Jt=C@+lS|Nܫ Pl]wّ`ĭAAD-gERuA :d2JDDZeh! S?&E8k>J+6ޚrE۱ڼ9\F(Q0J/"ek;gDLW9HU+/STRP|szw~yX(+W u"PX3 b]wJgSVuˑ jo#?ku>D.%J$ (* ߽G𿉺K=zQaq0,{"Q-V ┘zfu6^r @b5Wv#'OJ">#tsgɠņ 8Rl3mK OM~R2cMHH< g"FwNxaZ ?ZXmxBƦ?}%ObU( nAXJap#ډO|'8%`* Rʉ_8xYK>W!W1<4v @﹌hyzZA4o -bfGX}b8Ć7سaQmL4*uK(E 1]QDj6Btg?rgOך_ 0ṫ{WqfS2'dǴqpq"SY{N{^LD$c؅!2NV $8 \#lk*O#2tVPt1wOȡA=y/jX8 =;,/vd{}BPZB굸Vsu58)AÞCגGGX/m:DxJ}cZ`F +,X0aX$nlɩ* Es]4wM5ɈH3a ZF1El%>qEMb ߅>$- q@S}2; h\žByL:>s6~bP@:~BWO-6~iI#ROfك,Fu\ E9e\"tCBiaeݙ' 6a=ߥy[_ 6Tr.v0Ą-L;VwJ_v/6 r{D 2F*8d];e~PGZ)cE%%~BZ!B`Dr@ N8|.6i Us<ۇ_O\$>RL Í '屔H#1(.`=ś䖦^on?ȸXzKe ;BĤrT)itâ)ўhA4jo[Dy-x!N20pקo0"|<{717cvpV*ɀfU+^X@*3Hѭ?`4G K"v,e@- ؅\ LK'vLMl~Ñ"osB3l&,G@Z2O@T<;6_cMp+YO#$*xwrg1<'pT`21.1~7\o.UPNBs\i/ J֢s qb§_~<~?n=|cbPS/"LZ&|ضd%ڹN+NtogT)Ѐ X ÎuueWj/a^!(}:!5(d©hPt J>qndq]u$xX W@QA#k97_B :g-/" o%~x9*jwC G\ݥMym9Iٔ`LZ{ȎN8  UM0W%{ͤ-hz[ƜD (; f&?}{\C\8Dvw‰M ,ۘHZN% *=1q+)ԇK@iIbgcAX0<4x=X&;GoÎMFM(Ksy;kޒmdZiFg^ y+^9v~hj؏yoL{L0>l`A82!"+KsV%1Op S7&<)GQrZc rh5at)m?YadEXY^`h7%u  Sd^8̟94pQhơioq(\{_u=c3) qXgEgbULr=ecpbs8 5>MJ٫LyLk ԫA}ohN<>mmgEx$9 I1{4CŖ~;:yC.kә&M~ (“kK@Y_: _j7;DL;) Sӫ̺l-T ;^^jYd3>Ի&.L_|ҴvY^!_[׻f5 ѠbNk &q cuK]SYa# [kFœu DȔ°U'?ӟ Vv=z8U@^v+d1x h68qq7~%}~^PIJ  Q D8z26) *f;_WPx:R҃BZi|-\TKc %Pd.M<~yr*I?f됺T.۷5eo2x¤beN#bTS)*.+huʵ۲@a*U/y-tB.b7Tm7\D?I$K>qk˵V׸wĢ@\j%{ -7tSbm]`6.bk^oR`O,;ƥ`>MˆBUs],k~SWjMF豐X^9~OOb_SI&¾!ʢ%: ѓIe\IgZK ?yU'VUt}()ԱK^(~']fR{pD㛉&e"=QM;^qAB$-5ֵ q fp#Y;T e;k˅+r*GqP8pDUYVFa͂juNE8mbpB '6',|Bi;9; /*<y#Dަ KNXNpx0( Y.]R$S +IcUN?+.:>e* ـ 5}aL˅!É}w~>]$.nh ??eFF-0ju,IǢxcw+H bQ- tAb)תXCvSYvQ~3l5!uޏRr/pPkff-K.hKZRDGNE.x) i+shQ-+e e;C36@de+C fYȿCldM̆W?5$hlU];_\^\IVaJvM a}SDN(Lb9U^;?c ;Rrh^:eYVб`5߉B`0Y_װO6i-lj/Er&][E,,W+¼AJY:ւ9qJO}@mgRB0?b/BW-%~?~Gxwb'E#e8 %jm&WbP1` r5@|T7#792cFA]R(mE BVGs[=Z QEɃMdt]V@#MdzAXP$ޤfuIN_Sikٺi&Ty;i9?|txrioT9j&??+PL9Ϊ0 Zy/X{oQhtk+KBk+X kܳʏʪ-7! VGͯ0'ZE{T3-N gq^ %7 &@ y;ZeTݫU2MEmR|HfQuȎN8-91|_5qfrBv)`t7a&od^Y73hBT$%Ou$9B WL,HRTs'Q>!<;g"JJq^(0[Eo)\J2VJsYt+d qIFF2ifJka Gv/+]FF &DS"c 6(~utW_2}Ygkl4Nu|"4@g)*OD|'ʦ&zݒHIYE VTZ񱖧&\9 hkO9CRQc &1ų8;9$VJW7AWP#0>G+a8ئťW Ȭp*ع'1-Xu}\>"*B#tsH,mZicFǴp;#5&~}D2 X׍V#3;n?stj|Nt~4kp,h)y%{Aw8Imƪ~$wWEʑi-MWHVCz: yPjDiV|87H7$qt--Z?1f5r9Klr((e6~r4 o.~{B] N8Rmb{\{L~$3_L2W]H̶nQ h9 Q2"] #5EV¤cue%+Ru2/8lt=:g]R͡`G㋯vf &#|F9GLOm^'@va\,C>Z`8&-TT,HDv@0 t;U5. )*?9V@NKG796}*䉎#§Le%\UWyMt ;'oV]L2y$M]|#@<$h9+<$:uK@5$x#~h-0<8+]++fo+nhkE EyMUK$iEr~M'kRcyE$=0ue ݆P,k>D7(z1}UF(Lu+\%/{sv]J9,}]` FR"g*hAN%l8T&iԞ Ͱ Y?oџj4Y !^i\֋2ڸ&4IkSyix]l5<2ĵ_ǚk1k8hNu*(-C,)vA;_~+'R~{:%FDo#5 cUrwb;ֽ$2͟bB*L6EۺRDʁ F.Ep"RQ.LjeaRvK' @so>LUTuyhtݐFKf_¡=N;>,a_~|_~x>9NZqtoLZsI]N \te,t ꇝĤ:6LppLaᵍW MyBݛE1#;㚫%MHyI5)GzpLJ92ӼNlh-So߳oN+(4F>($ˏ}9Ǩ+ֆ[T?s1Hb bz@@3.߬ʉ{ ;֯#״nӺ8 hw‰ [޾7L>^y=Y^ iwZp|eK啗\'ޛ-zfc{Dh-Uu@ NbXݸmlVY=]8Dw‰ m64ǖ6{{6[6[9ŕ95+b;+PYJ0bd)=/B,~FQ%h!#Q,\ X;Jj̓JHHN`׉TK;DB k.+(κݞ|Vv oiFTZ6mGe?nxN* ,+,%2iYv $r]IHu:`q<3L3\[r5zQ MMְa RH4ٴU4Wd!VM64Ii==-}~ ;q uMV/l^}流zϴU[mcU%0bV5Pɶ+$ fi=bq/Ol{h0 =:{qG-M-MwM"@tf -:6EmXk0N14β"=Zu=kBbJ+vqp3a~3hP&ĠBSD37(Q&W|\xL U':RJTUxt EhzkU"ȫ;= dU:IYBZ7}6) %3Xe 3S(Ȣ{E)TyhSH5l5c5-kUR"z31("ĢiJwO#r$\!vWxXΊfe}"ZL;g8Dp4sSaSDٵfH:R9MJ/T%.L!l&R#"ϪM5`{QXQ= 8՞꠩3A-JY"zƑ@Y4&Ù. g>lAz'W΄'Lx3yj&P߯Ұ;C\x&x&Ś#1 z[Z MQfQE!M73#y;{Ȗt2n(('c ^!IƒצDz~ZP5VW:\e* XU_#rnwAp"Rjᥪ,$JNt] 8Akw/VZX~QysIw\QOp$cֻz1'JhS HhN84}s8q[sY1WM;'+3<7Ό#}۫*9p(hxdmAC5X'7tQl p=t |WW__^¿./ÁKxE".g] S.r8aO;^q~(5ĉGYWͫBI8Oa? c$ldUT0p=H3̧5>0RBJ+;9D)iFm$pRWl2if&˞tBQBI7doJpRpj+}8i֜~mn|2O[NTZt6*gkpiɚ1)48w$m9r4`J;4e|ɉET@`#pCbM%T_]"/2ѯ=[YZ#ʞ(Dd-##Wc%I,@j4%( ў vz ux;|?[ dH1v={^1A[$|W+o鎻$wսR8(ި*o6I{خmg3,b4]rqУȣ(ˮtiJs F 6._imRC +|Et6m [8o21?rva>40B],(ZhVhY{gu /eX5^U-ubVv̱A VI W ȳ)ur`\?qH&DvN%])A$i6V?o@GSV@Ğ7eƼaL9<DŽ,d &18FgM.5~ڨ"kg˞ d) G% =ha8MqHwyQzLJpp~ĤPeUv356EoRo3fBaf9Eܰm=3yl1Sxdlyif[N&W(&mmk_pk LKJ">-)e?D)g7 LQ^sk%6Q{DЖ2旯7j}x%z*-հ1B}̷ ( Փ82U:v4c%  h ep1aBZu ]9fp@*a;`^I] 5AqF:&~ TH)һ5yh18>p+lv0.Bjmrc@Q:z50]زB⌟DθEPAO`N'n3cApdm2~l"07W~1b/Mq`qn7= N!r*ǩɘcUD4.F\d֗J|Z.ys&H9vdnG}TΫڐYmոI՟U3mi Ýcá`BO;>x9xߞn/foz~HA9UnJZu'b̫X4.)+~7+ @ֵ¤Gb_ ǡ@:-U +UrvPa|N/wh֤)W&Sm1?z )k>]6rN-ow_>|N~}ZN$j<6z#Ge~U=8gmS8oSSu󸌠/ VпZʲPC]슊܏#sbŸ_nbXT!(ZRnqI|AYDaW|U"p(C >kfɛ+D&C&%N@l`N,bΤX%#]WVQj$n3zxE-3P5]>X9gZCG.ބJQ7X_f'}S~Ru}Y1AzZlA_(q8}_]Tྯ.N@@@˛+̙pdOev6? ,:VГ\/ bDƟXhOJZgb Qn28ΙLUY?:p(Ż=қ8gZ;>Um Xj"[G]1Y?F'ϤB+S]fcЖd@-9WrU+ff5"##}:)6O^dGYna@3!Ppv Mp2^cwYdgRhǀpDO(20CE#O/g5iTg9vwvjRV xqLغ)wwcw=35āf=fLH5]~}҃[=c=p]I 䟑b0Y$fC-S&Oɱ(%y$8#:##љ9]YκEaNcN$b*4y5b,] dSqwEn43b#Թ3P!hO7󑰫AXg1ZzloeukD,vߘNuuhj [TU4rl`״~7{VbO:rf\~(cq8X|}Wdn9qRj$IHS!EuQDś!WQz{Ip%:B.kE?D|B+U&UZr|teg)PErMIbG$By~!}cPcw#;L>|oTRpo>^|gyWcZdjTP ~Tj5"*vTU;2&hֱ* V(+/bBO|ܞ\kQq`""+3>vU yP3XpޅDkuLʟedUoX8>^z6{W04gi$C'%[X3)3%TG SH> 0fȿ᧘JǢ[G`DޏA?<3#ZA-sdJqo(Nq7&&|xu>XҐ m-F; ˿_LTEA3%8[)t1Knט# 'h1.>l Tj ]B?xsݥ[)o~j5&'Tu=8Dp+lW^lTǁ+j_AvbOL+1\4kab! Ɨ߀'f#h:2Pc(Z*1 ѥSU6. 6[L^3ѹ{\51Rkcq" iC,DDzղ6m7lNy>7kZAJ%eQQh%e챇ֈrӹ2^b"FDFƏ621C  5қQcx`k&]xG޾$Ңl%G,QrpBYJ5W*FZV.6e8*&hbFRmZ({AI$o8QބCۣz9f˕Eͩs93Ҫ9ypa ԰Tc$Nj\wl(Qe? g |T)c)ǻ\,2߀v%qV(VjVv4MNW,UUD'gj;݌oWsY`LY 䎰yPhjkŢZpwj5҄詆MꤦoA`%Y >-=6}s}t_Q9F8ǽQ! I.*( :ug׌a(`լe>taR),_X(μT[ Q9LEu+}f\?7RUlHf9ĩzCE٪ ,M8;D-Oċ0 Hw;KZW1y(.jYb)Oz x/3W^ ()P.9 [,>J5:]к*-9"S'EfykG|ҽ[WXo&{)U KYDQ贉~U_>3Ys#${r8j4 {oY꛼3@r%{]Trʒ.pAwSUɒ]HC0Me}xBVh:[b%\mv,al 5ϏV&f 2R'`Hz5> Bي ÿݾ}> 2+/]{pYr`-Q10T֪"bx˛Ev&u#v&Km5562+\$|LH'5.Xm79xS.-=e9()>(yY0~8ge}[I .]g6q]TBhf9/P^13s8fdmefd7]WǴ;U3s;C<&ij8fYP|i2%4J#^0s/ҩz^3ا uMUIVPOs!WtSd>mIӓ$y>8)F6/M56p /+:r&|pT慤2YjF{"3nqF`c:RwƫџI.ūMьZUdt!)M;SLDӈ  +(պn%]·8".obg%\Q8'r"Īo13Q+ KR { ">q\iOX叵Wڂ`u`ɻ۸l^.)hY.h+TMx*УYM.O*}6w^"US>mJ8`cGn(ޅZ_rI` [R&}bwy7pG@z@$HX`Q*EXq: cY^L0SfSRi~O7Qߑrx{)l IB |\>TdgCȿ{Ic5t ILzq*.a~dscn8wzM<"uzVN_6 H(G)T&@ZiO'GZ3X%0ߐEZ7 kJ/ШZ$-Ã2x>VHs 0S፠F LnF` 1k4cOh#DInEصP`x}ReC I=g%sUaw$aiS 5x3,‚M#m'bQ{0!8:%v'DI9AH^^BxlqZ&2҂XY6εӹS/ n)NMĩ֊58ˮ0ݗgiEm;K&8WhB~磅 g:^'RS OԸ(,r̄M-o߻8ծ ޠ[re Y- TzkP>TsᦀFԒcą rcbrG8BpG e= : |3'҈90`NHmpbbߖNL-N.PsӃ0QZGa(ǣ,.g4%X]mTaq gOn%2S!Ay3 @j WГ TD1sKY4[`?B=nU鑅38!픟DddW}K{">سr ٫,\QURŠj6FozPom*Hs`8|٩ \>H_H3-b:~7 `cYHc4~JVAOgo<ww %Q3H m1bux,|-s."ZAI㿩kΚ]J4;t˹eS0 M4 SLv!։a겟cGM}w#VԫX/ D3H`)Nʐ^sxmN[ )4>(g6&RdG\qV? -)&1lXrnVoo(aѱBԼ^pa]98t VYIs}lP;:F,;Qg@9T5')Wk=V}Z郸ؕ%Ix &8o@ݬ?731t= ^ukױ⌈Hvԫ]["{*󴵦Zkj*!SSJ  PG-SDb܁,t\Kwԝft.ˀ7H tJDj( #QK C1Z Ftvw7˴B85ä /noH42!\'ihnP}_'t5Dcåk&.DӝlJ0`%FSh/4@qe`3N9`&jG~ǁ l8@)6//5\dFwqĴG%[NpCY}qq(J4wz7yd?dj綳JZ]]Hh tlthE%J' cJ_,zhLMfJb+,%vbf_Ф}촴m;J&+5;*D.|tAcqmP"vȶʔBr/^"uJL.'pG,6VtrTۣ+*9Vx(׺)콚Қ|˰N_83R/WU?U^[R9 sa\nt8JBV^ܣOy劮V ĉ<]4tӻSi0ndr35$ 'jx̫d1YR'rG"}_7K=4ϢAt5J :Yl5!M_ܛ/ȑȓK)+Kin#rO[oPuzܥrJ1cGn.ޅp c~6g wgy@M<NdP|.+~d2PO*Votn( 1ײX ;G*Ԅ d0Ctr NS[iۇ?"vy*q][cW[43_cp- Y:o*E)}+#(zw%$y 55)QuӒr// 1FrUH4Tg˅>-&e8vڹ/mbE]5)_ryjw~7V2נ# 4=2Y&|pTUsoo?=u@Yt{8ovׇO}~wV'^jFY~;5|M%3}QF ,suzFp1=QcbjđYG.Ԗ ilDAZط~/:T2fh*ޅ|_B녶F$GNJM`"cÕGi* N[i"6,64Ы R+^ǵdFf➸Vn٣݆_%'7.Ovvp("X/e]s✇|E7vvb.{֤/ŚT(cB/N8:+8Q/)*fd E괻pu ]xys|0 qV(grV[OuX8]aS#b+=FsЖ\WxJƌy[F7n|P: (":FIrLxy|Ppl r t)7__+iħy^V &55>HF\#|eju(Q&P*hS Ow_F X;l7XlrdV:|yvm yf"eM9_+Y[ye&T‚YqwY/`\ڜ5s۞k۱SH2ZQMs[0y.`|,}4w*L47lZ;/šr9n^eavNS}v ]tRBsN3ն3\}ޞgeSz0}1NɆԫb2{2{獇rY^n&l=&G2Qs-=;kEnz|_N ]ڏ_S x{.Ó !<33$ !mT v>-xB8:9-<Vw)fhꞐQ]:-f-$rgIV$Y;U7kUB/o'Q飗Ţ.|gqcr"USbgi IT"Kc1&+[(R> M!ƛHIS?[׸Uf*9c BW9'$ĐXn~FFdrueiJQf:YMe5'|- ]F?.sHd$Y#Cؒ8GFgh&+=VZ+EIj7)#Қj,/:Ϣ\*~(8.|=h=.)~/6Pb'OO&dnAVb>\vހw ~1|n8D}H?PMGfOL7HU4x`ֻ,EIO_>{xͻϱ1n~_' aކ0}kHyuyEn* =S@6Χ7n{7wքjOa4Lr `\pH!3IE5;.Lу4@ 8 VvˍC-` Iڀ•Y ðX  jfΘQ3"r "2kB}})Oѧ߾H;{yุ"nkbXρt%O.9›V~Mn_%_Лx$/Ws(+AGkBx\97!Jazџf w!/5("=^ K_F18 n\C YKFaӸ. -zቊ*w?('9.?!҅9!zt,zSAVk64[]$z8!ބva8N$Wrm2*~̤s+]]k'k z5믟<0}LZW;;}|fYȭKnv.o.a}E9x,#PN!P#;k`c&}u9~C<1%k4s4oåM;rώeFr XkOpĭY&h#umBЬ E)=KRŒ7Fum7м6585[u Ԕ)P-!3Dg ӣVQd'Qw0տD@~@N@ ȦY`P)6I& AՆ!V8Ơ{}pȋwQeO/nBj˽ygܐE&+!ᆰRf[)'6,f9@U2d(o:{PQY}z%xSzYo3s>xT: Տwp ;x_~Y/vr"26̕?8әOQT#0Of(J˵w IX4ĵꋽ}YPP_~t犕+RuVT‹a~TMܨz<R+Cs-N| vx8|oWO\K T\-69t^O(,dp:G@y.ЦogA(% l9Ы&.)E Pi-(66"_? )qcr˽ʆ)!j)bѫz>y ,C4CNlQ,FwےFW YFGp?"_`f3mhS_nLc&}%`IWs_0ɔvR#/;zu֑lͭuq`'u+2e_/ԫQ ~yVR )G8!*D(E | k?Ֆ*hSҏ6M[WokjHJU:~b280AxWgW-ӳߪdhh;EbZ"!BW mޛ "tWeTKsyHvqqu}}yqխРV=_FSР^E }Y3EzW{/nk_E#R}HT@E4̊[fqRd `GDJ4E6^@ho wE/|i5}mRc-zjcPK!$Вs3 /8;[)*'!A+5vg<axpu=Yaҝi zi"\gAҰoI%2kPTDi+nYW8d2u 5'QE?f9/ )ۛǻ_[{|uO}|g.4='MB&lDbstx,R9V4HNC~>0{Xt%NGNѼOZ GeTYuר%hyoQ^GyPk}<2CCR2%VX dX"~E.ivwdA2Ehxdp%/聴.St@^A3BQq@QO)ӗc{(_At8a[ eq@ԗ^ [yYrxKnCq#|TQG0esZZaDaXdJx%cSoTX^]#*2>BɟsF?xO$&&@6܈٠RVh~Z5= X6own}oooӟ @pNXD/z|rhdS)V㼒FrDד.\Bk7Os"Ծڼ< ZH(  *ۈ=Pu(Pf گ28Pg!ԑHl>x5p̅#|y>(AGᬲJvכ>˧Os<==|xg:$:t ;ەio7[`Ciz 33)&{>C>.>}RWl7"jK.Xf|{s&Ǜ3 ̳4>z{B%q8kK"h;ڨb*zrjXA!._QȺYeGSs%!Td7 "HCE|5"EEӲ4 @AC^v@㊳U % ]y;d4IODP*mv<'N`xkZS=3WzIb*xVэ{aO q B ;]0_aoWt7( 7NxeIKdl'ɣxT8.=R# R jKoņϞ9mNZw=?_~ǫ?ț/غЫ#3'θq\t @ ÒZpIU XULG5p(i\ŋIXρnZ[ b8E@t`QTPLaC(CqQ+dUaZJq,bgT"aTz3_Vh8viwv)?DA~#8Ug$GwpTE ǎR(V RwXUO?nn?קًR/4+.'Vl8 i4Q_ 6w`Wݍ4JE,U:,԰pT1}CQWqګMdj-O8nܡ\0?HATx>:Goh JX''xa$IIDzX#8:wd:fږpOz"I$sC+1߾2Qua򄞸}1̙JV8.|a4vpu"a:Oo҄(H+Fr@IKs#^b( ^.qN1m; @a5^oS`/Sv/F׮9p퇏ww1S'޾TlefMHY]U\phȯQp^O?/_~O X?m1;u Յ_ޛADMe:+8u&ؑq 5]#}XAyfp1`u=l;km)ksgn(4Ϗ>l:Tjf7უf|cq~!q6'PLI.NXiolw"*Kr%T*͏~Mk0kܖu |nB}cɩrk0 DdDvήj~8dph˯.meںbF⬊οyO=a0Lzu:U= KP{qTpVErY_ĆRZ>TXINU#5J XPVJ"j5J67 y+D\)`r0ŝAmv6h"zѡXApo7+ V Ek 4+4 Հ4Hi?.URMаEיjsJ\YIj‰&KߋgrU:e ]H&&;Ka,Y=M N]?>/ YuK.*% GKi"+l\Sd(D|=] Ԥ rnojA}naP  (zu8Pg7KF߿ D(V:",89ԁ9+-e T֝i"Iگ(< foXw&Cc$SF`i`My yXHSDz 'k '6r{A5,e1& 7* yثGGd88w>)=9C~WW>_U2q41C/P%qHGNBkC5(JD hx:BPF%$Rp߄"_`4q Cp=>^|6<x1(Qz'IK7}CO\=b(~bUc=Pk-[:7%`b99t)O,1P KBt;eDŽ$2>: hO/(!Fo8tR}5zH ̦&˹]g4)hnhD)- 0 pjP1-YJR(A^[JQ҃( \{|ookM-5flg,LK5!Ն 3CR?!8{mnJpO 66(*(A xCng4B 2pr+6K7M;lbd5(CةɊ΃JqR`w"cC@JC鍠? < 7nj[ 7Ű+Mt飱 _Fb u~_q?~[|𹲧vֈA 7U"(c\/xeCIS%NҐz☑ ::Ti fq=Rl/`ԨVzkPW"~}{ǻ8ׅs؈e?"lDM%E2k(fl1Y3 ̗Ot 34p$fkbS cH{!su0= ,;t.9 ʡ+:i!]c.f$aHNHT<"Wb<%ژBߍLȘԠu"qG&8! 7^ (l+>yl .x?ZwH #,rL#m0#,Ҍ&%hwZ c|#h$RqPꃥ86e:㸝܀<*-W'\!Hd6*z|) t<^'XH`%/[{$X؞΀Or_`q['Ьh?++b.`eϊӆUa3acXLU>1S>VF,Q+ 0 CC^"`Z(O\:a20L#=WJ`dNNG7Nh6VSJ D: tTW,W8o[JKp|PIz)DEL:c>Uic *-eRY x%"pP_ڭyp6]nt@|0]<<sFzI.4k"%i(!.,ޅO=(a<`I1% F~ĘOI>s_Oܬke":8(}ߪʮcH8:>(jps7\]e*s"m j ZZsdM y|Ԑofe`ˀ7$"7჈ 5 Y<ѫ@<jۛMpc #*4IM%p:8V3@saօpF]3՗zk41p[n,d\fT~>=N;~ڬWɾhؠ;Sԯ!Mo ƞ 1R+YEUUS7bz֑Z/4(H`#(7^f8*UU.9UPQJ(m5Oq^,A j"K6K߫"6UZZ 0+ɑcMDq jz<F aBR@3S2C/'T9 cxJ78@j&F<0Ɲ@t`hМ7C,hOK[#m"gO,MS{MSuƧgtro $hmx*#͡Ѵ1P16n4Ӧ=1մYS`&F #i!1.bMFuM36#riզoi#._H\m^6md3j͌׿#uΟ~i|kڸM;5R)JF=pzWkLưIw6<6)î_H3mΑ,}ڨh1fRXhb%61W-Sm)t-&.70oܷ7Nja" 2ŽyE/9ק}48,RBļE$r'܄)pD-ǐYDoyfI$zYs'T42R i>v܏օ[I sJ]訬|Y5YE0mHD㺈%]VdD: 5J (VzPiVIT{@Mux(0Wp,dwL/۪i8r4WNUSJ۠^O;| ;Z? x:kXYo4H6/L,7X/eom!*@lbJ]/L=[Wc%~*:1Eh[@<;ȖeXtscnOC3lXW;g7/\גVKS#`Efg,i'>̒}l[yzh :{  ņ"&dE&Y@WvyјB)-ewYȨR/d- 1Ra]A_4ų*c}׏FvG]~5 ʛ'9Mg}}LmdVdIk++%URYHf*'5*y[L -IĤq>DZ^5k$+ef[4-ݽ}{`6)}|9i Vݝ?a H6sovDչMBؔ(}U&ar1i3.ƈM@B (klP6&}*}nXqY ݣbo$7nir7})sN(!LFh-SVoQWkq?"u{_197N8*p$7e) bB^5J9u#eQוYߎj`UʞVNЍ1>I[i{p *jspks஄e| <*<{|&#]x&Ggz8K$Q+_#w/$oҳ|o_rV$$y}(/g2\ĢXF@%#ݘ)َ*rl91x\7HAj5[x%JT.c(QA^%* (17ڈR#D ͈W;#Gc|~u(ءG, 5V5r =Aa Yi" !mFTWiB!9fY[9O<" $l%[aQ 9RktWʭ !'?nCʡuGaW'r䊦༠:-(ۼ D(Щ&]ڞ٩F!DWU9z`!  [)'.$ؚ pq#+Hem0lm;,j{Tshril|( x"h(c` [9 D`8(fjQ25 Б37უ4{4r8&᷻wnv_>x xOߦ(z*} (Wǐ(W$u[$6n1;mFCU-JD(,@4-5Mj+wȒ0`uT8 MR`g p?F ΉkGNx~x>8jMq8Ӧ~IQ԰СOS̲a|w <-'?mZ6`z%H|%¨5NY)̽`9;u, Z;-~g#q7I+qgZrT픟kI :La3yw`ckr Mۈmic B44MHݮ%K<_Q--4,ͲUC*;o&qWe|68>\+J.=ShcS.@^o`~̠Qx9Io~6HYm5Ny2)Ĺ]FP|[6/au[U3+Qpbٹ dbJRB%oGdp&dK:GMC ?hF0.w J0R#m 600*)Jb:2*%p%0*mEuH#G0r֓eU]Җ|"CG pTg2‘~[!ㆽ͐q D6"^m r"Pd \{DȀ<1\-2V]+8V Jn"I_,RJ((HW(p(}}H:E3ƐӒjAȹUfQ$@=ny<!7fP-7ClḄAfR9ቪŖYb# 򔗺 Iffo+ud2xE<ѐ1Bb7Ȃaں=tQfϡ_<1q8 ^3ʌcƺ o*{ n[-@Z^b G1Jo\6wPE:PqpW4I}+n0ДlXVa&]̌,6fm*5{e]skCePUXPP8Z-.8#FƚY/qIo{ᬬprVPGS~ *P\k򽴆,sLfaQQc(AWP+CM`8 YMcTۼQn"˄'uGԭy_O68Y`jp fƠ1ꁧ=:\_8vT %̛z#ác08mҼWg)ͧS!p!0\$:2'At7дS{D M"w?=C:N4v |14`v庼8kMw<)s54ЬOFˌ&FdG7f̩@ȭodZar.NFsolʘ0+k4eQQBĻN]6FSFӓ :Ag4ݖ%嶇&R6 'BSo6OA?jjz&Aӌt|SY\nhkCSMw4V3Yh8і'K6ҎqCĉM'ՙߛ7\aa9)<"` 6.8Ɂ_BZM~(4pP߄vg-Y^nEY{P wf˵,PԟkY$yt0͏ctRHPQ849 ~!](Xu<cκ% =єہ.> @|8J o;<Һ > 3 |D3Nq=;hܹ30 QTMIXթEunG 9 ?(#V1p:D0IKXt^U0UqVC "L>] .ܜXȞ `[Pcmǔ594x# NEmrC}ѹy !I8|Yh"chT]vpJ]ap¡&|[# Նr璤BO4~4w<+i믍{a9XCvׁI YKBY9 Z9FT< ˃>(Guc_/`ظ bCI#0mPcN%HX cyݍl|U'xKO֕_)x x٥b~>_ۆmf0  K-"vPIB0l1n);1R&Kqh"iR];!EN:fk."2 XP}0ؗA[%Id4VHE4BTzYa=zݻ6T%/GnoL{E8]: Ip"2R qKKI_xGDSD@. >87~R}]KbZ4Dx+W{|/}|#f3='M(OTָ&җ~ aK&ܞpb ԁ3x$9|TeI&FIe}tic_mHD?Ʈpܠ923;޽_9Xƣ [YUB7 glX hSOeeO#Ch_C{ޖ>m]Ĩy 2a^2cphϙ[x#[wxo[m/7)/xg14~cJ}2;_"W[\^/M[Im2k +Bl' 3ah4۠y6%)VꞪc0H(52*d?ur&ѢYUtOu]"@V]gjJ6l3SXy f%6)3EVl{yUWT"c)V<ܽg,滫Вl#k"8F18WWT[Xr?_Ñ F8o?|F|7j}^O $la+RH?`=MNP*ċOq`I u\6ԑtx核pp[zQ c +z7NC> >nã*j*ZIh\Wq}rquy}qpM?/YN!6xpnF4Rp!~{ θ&Ls:hucjFgz5ꆇ? 䓘1S*kL!C+FFWoGݐp&.Y8r~ǎI*dE5Z$\@]ef+MHzt]PF1wgb ˵ G$_+ 2 -vY\J(n ,%tvTdiĺbUG\`ZQ-yn댠Q&a%Ef[քpm úAU^ՍL^4/bG&:ms`, qO!v&Xu=pbkPur5e[QRtQ)F 6fr `S18S>9h*9`LXOk<|Ѧ3Ί|v3k-uD̡z0}>Tue>CϘmZ&7aYp^h&Vz }Bv,ֈ-C殿"[YC/cT^'V`f, x晸 GIj4M"#:ǹl*U炣cC\*"׌E6A373SM!!0"⃦u9L QA#N}Ps==QhK:uLZXhYXW;D7HS -R9'H4i1RG,h8d(ў?qy Nj.zߴ6+O wG@mh|BPWb#"ohud2 ҡyyf13B?U濧uZQ̌1"Y$y?V`,fo< ^@9(^(?)X%-8 ;YT;AyàQ8=-83r.3UC\TK}f)?ʹ/, +3,=%Y;A:vQaj(FS T؆0+¨لšb;QEP_fȜAX))AF(?X%Vyu#JR:זscY>fAOK(]{m6=+-bťYuNni[p=e/r۴-9:1nqYn4|aWi#H{uzrlw]58ˌWar ]#좱74κ˸Zrr43K%^ʋEǎ?rHCιdd3R>P/*i !V2tȯ`΢.2ÿ|N=g OV,ˤɕCSDh\X*xs]k#1ĨuO0ڼQvY$LuEV:sW ;#%QL C\u]ʦD$҃X3𶁬0 )#2Hr`ܧm[ [[6V|VmhjDžgţG+WEx#r8],'J#kWsFKVqi N9x#+-)J%oAņlKBN 65qɅDJ+5)ӑtlf韖AYD,J~#֫:/w^~ ~󂿫 1N] Ej -=|kp5\Wv/0++_,^a^g,`_L 6Y1[]nV˖5F j=wY, s+xg*#(Ju@>If8bظqK''E0^sɼ##gp ;HO[plÑ͊rT$O7GXW\8[t.AWU^)nx /JvafE=UGü|ɤdw1̱#w*Z:e9f|uhGzڂc፬U_ lCh;qVJ2g-"GgΔƥTPr36 ;YԞj4ھ=|UR;_`(X᠞RR >Rpǭ,VՁ#EJѹp+ bU;; %XSxqO2b bJlƂ;1wڻ$K*4u5R {N(,7P@=l'8"TUZĔsIwMCs"r 'pxW_*Z1~R`zM,` )" i mgKYU]n%~FԎkq(&ϜTł ܱ$ Ex0HQnzQMrI|Qbg;veLvCĉ-3Iq8J;BAs;eb,8}Խ0+S".C{). "^,h8N2º(zr9Zƪ}@ sce# Ež%.Pey mY)t˭i/qJS{~{5"RbAi;(xD;)MiD$u΂.속w!ӈ& B]"RNw1d\ w +db6ᲒM78R6VXvx$KFoDH|Ajds<& Sjibb-K3$J,Sફ9Aم|nO07sNjt_"iop, '2ogl3}v!5}U9MuA91;c `xئw:<:rsgtb"%:-'S'kuܪ8Gٷ@V #sU;oCɦ m M[od=K}VMa rCI#*kŬ0 0Ǝ]tH' LK4ACI';*R^ξ:ަ26m EPM9I!z3 )N/4RȀu> cutS7@Y$a`"FAHVDJ0  (=` ܤx@V(.ڏ&RV8vɿgu[AJ0ox"hhUKl3aʫ #kǥL̺t/u\Y!9s49@q$,rI"{(( ? f5f ! 6oɥS20'I{ypi*R@AYJ9"~'Mz`aW4T*J!gg+7ufHŅ" Dez~Y #QqRu 6*8SceWG ‘  a- ^]o}8|c;AN a6&xuLOkj L:บfm !Y4^I͐c'Ҽò2]Ӱ/c& #\k!gIG ;hf-zq 4}F9Rȣ,}@4G ,Y5iŊrov8Q Gn6AY"H sCC5e4<Q~|dz(zzҕLj20C)˸\cO2Iܟ e#Mjn:SFjNN GErBG=qw e)V(k-8q_q EtR>HIqrnQډGVqʄ-)>k>$P>ɪPdN(Wt"L|PW\buVg(Q! +f9:0̀bDds_ڕH^ f̹_D:(>rX9>'r'Y9 XRU쌐P.#')rxr̀]X2 Ca%̐`Eu|~̪ Zq?lE0*:ݴ$ uh7RBG!pQIscNJI՗7IaM15wχ'[?WG&_#w^K+q,v9p%jN;'@l@I攃)d0^!\iICl>D,yC3l@/eRk۹h@1@%ɪTҬű7BKU0H/ͺ!{{쵢,R~Vv0 ͌zzz64LmD_i _r\hF|7⌐Vf'jic| m3nn$#"pU^}ǧÚu)5+FO}ºc \5B*x#ԈVHQ4 k) WۣD<S$eO>Xsb19t=_7Z;āG?K''/Q05Vo?0SzG*`bN@H1 /&B1FO$wm[#u"P-\jy*A kP&KŇîwX=E}N'pƛ6M5#8/hH,5ٵ.;ݢ|~1V1k;E?PS_vuD|T`Tuc%ѲtJy󬍿3g)$HF-ŅB!`eN#p/=\*">l|kY(m5(\hʘEXֆP.xizNT44.H^?l]Y?;aELBT5 \m;EsNlEw%̤!eӥ`bS OIZf՘.D:} 서KkXVmN=΅ԠfDS"VX1Z]n[.) y'fRADW5KkD='?mag~1E()eu@$w?FaxYJmxّ-ŵf a^)ˆp`V~ |X]]nDwnh謋ڰ@i2(ienBApiѝU zHl`^TN<10/Ѓ KY$PcYa! }C7OG=dc0f<\@+ήJ@zTVEE:"fNA4E.YV^/*R]n+uJo۫%C*tΙ%r9h Ws),#@+ a_4y+ 6V@uUg2$Vf wsm;PԏN -mPɈЊKփr,i)2.X`pS9)/n"7Y׊C-'ː 'sC\A(ٮ aХVdTU[{^/YY - N<}vw/hb;)Ejr4 H'(/DVFh-?r-zNy;Qy+kc& u n|fP'g za_I`0[f*0F`HQYN;V]&Dx{z}y+ᥬXBZ]nV(1J8#AJ ZG>S-'p>^OvZaw@P@e?^J,==FldNeKtDN VYۭjH,=mI?mpՇ_/ -:@$|LI8]yϤ$6+OS n_N)j3Cd|-^׈cD9gAnYjp}3 ${jvR֌?PQ Kσ;zL JО&C"f<3%o]>V.,|,F_@j' <I۹y*P7u 2,u;%<\aF^%-Xkų51QK3_6 (7SXJ..%eNBM_nBs6"#ҋ[,øVؙ1f,̸+YQ̜A̘fI1Gprƈ*b­ ֔!Ոj%bnɡD;#Fiy e+Śs(uIc)uagDKނciuXQz𰀠V#K1 ,#PKumv>Ii _55EyikS{4| Nꊺ1D1\10Vi2 0-iWH`VFt~O0rS,MkT- ٍ|acCѤ*\;%cC sO1M*mOfC&8ٌ+] ] ]Ƕ3f]v1fN `҂bdt. /PwSځzpNč72I}(?(!q,/lƔQȢŨK*?R+h ߉,@Xcz$=xӫ!F۰ ~')ȝ ./u,rޑ2ɲ.Jwk|`{Y.r|vbbtU!Z `AYbBlje&&/}6-Z6^.i2)~,~lY>䨪Uq U-V4)FP%ڨ^֧HȯBثar?fE!TU_UZIэQa+0X{4Uy0j?PpT} y`j+X!MU虆!Az.y{̳siGg *EAE=Xd;bKQ)idnI/!&diČU ²SϞs m τobQijY]xulUSfyʵ dyDY7Z֠RZP8h I|4c2 Xp.3t֫Sh7Lpp(3Tx? 9Vk{@p.ǻ^ m0Wo_L#t֎r_ĖNy}6;D ̊;Av0q+"}Ag$Lh q쨝b;alP?B.*6aoP<;l740U)o>|'@O$K^|q.gF1ӫ>6}e8BW a]8\[=}!\lC{ŗ^9"-$Ƹ(q`!U: @XO/D% _tt mH svW<>a_tIEQɊYUM;oS񱩝H |p4p­.1®=^;hEry} 9U>f5gzHF4|BlQTd$1*r]q(*+V9I-IK$*0`];s8{Sȳ¿Gx=dR+#A_z0i᥁Et_9p~} V3Z;/aQTx̲ o EV:uCCNƣnXΨМMxg)(Re: KNiy騄0Kj~TI8ux5+DbGU"}E3a0?f۬֬f ֙v$5,S9a7`G, s߀${H)hFW%KɁղ^<(Dn,0%F'aRSiJLރ]ӘVf2B*d FKxib_~GioÛio8\QD,VI%K y/>=|]J[Xd]|[o}V\quϱ|g _d` QMud@¿9R1gVFG-h` pyjSuuRqJ ~im{B#U^g+dYZ \2QlC{%|$NY}cM`fgmhx 5bbRܖv" ^CG2ei(I2IG28. 6&6DXSL ċfi. r+JtkΏX̴Vz K3.:mkQ|g4%iFYH؆eVaD H͏.O}__$&ّ ;2 1&⿅_Zl5LzJ4 2ܱ"1&~F&a ײLz'Ұ',R|r'⬺8;͉#v1IُR)s,雚I ?G.G, v}Uj8uVH}3h~ 6B&'qILpif[m&4>߇aSL18ٗw ,C˸!\8 ptchWcP,/6$Ws ? \p&Z46-w:`]Ah>/f rNA(Hϡ= sȘw0x-GK͊˴G\-Ü+F5[drw֧m.LZ|Wug KN)hku1AbHÚ& 5]t~TNҟT$݉Ի}A[L^Po^}?(e/ڄ1"XW .g7lp ?|Ws(-#9btWp3ZV j bV"cWCGi~"̡#Eå .i-CȀ[KҴ"9"!10iiO? 㮟_î`Ym;b׮ST%:J%}V* (;a[)NLe_|Au/uP%1oi0jdZ|$ CicElȖ]RU˽Å!(_⧍ж>M9J K5Z,(;T#,*Z4-^Htl=BiAE!_ldxe@آEj}tâ'* _?$;ϬOr=ήqv]hw?i S`l oaQ SX=>}z| =@E |Q`#g[-Έ,Q# D3nlwS1llP+0bL WLdfLKtJa{oXڊoUmQ{؊取/ PvG&]ʰs Υ.+F olBT= Ig2}@}F04r73HĖ!NٗjrМN^V' 3A*0ŗ o?? I]JRvVDwb2^(:b8{j A@7F-`cbSyǖP C.r#wh08[A_4}7&66 -iI#cRu*{\uȍA{>T$3濲gLC}JC? X5 ﴴ &/іeDj~Q`ETܽ]jfqa;}O/mO'yEa@hA* *t t9!"pOdHbtFgPc1'J6Vt̑WE!XaqL4H0]@ yz~ vjVS0] [®a,{ĢSQc Ÿ#Z`l$nY#IΓJi#mcp|}=^$[bw=bnZdS<#B#*&E2\_̳.طNRR*|~T[O&94oSzFX^Ԫ8:1;&TbZ~cm<|.\,[!,1* ]&x}X4[`"8J;iI ;"Q 4a^]Wg|s(2eݞL;no N:` -EK2XY.BȣhCҷux\PD=\`Qkؿ\%S,uԌ ?~zy}n{M\0׭"Ӗtrd~GyiH!IPN9s|^y,05tq`TN y[6r+Ir#2zQS);?9;>YL;bU&Z܄Vsaߞ[phm*ǗuLzIEP^YFFOa=a.MMpcӹ7D`аNOП-ͪ~m FEynOߟ/XҧTPn<*Y9rA [}z\H VW^M Mowțsg.bۤoowsr)ߐHF*#PەeZ6Sr-J@qe)w_MpN?*hFmpP]CصBa#+~[c՗>V>d(mûJuIP &CE^\_=1P/L 6Oa՗rXYH tPc'X&ʍ4[[E_9U۩r?J !/S?ܽ={yz/YA_*5I,!NP$*w ~a蚌 5WP4avE7 !l,:8dh.yfL]%pGԳyLJ۫m!VȚ}GؔQ0v9rRĆU7ntC^FXUc1+ D1sbbM{u5ijp@#*MFmN륬Zwn,a#o' 8/% t4vP/̰^ӧ{ݏ ^ņ g,5h=w´5/=Yh!nA2؞& c;vd+#N `Rcg!wd.>>!زP @}^@8+gؽf&5zL[MSJiV :kL$45_EhePzT+A_A:DB'0M1R]lj*\9#4mHB7ptv+z$6b[XD#4}FxU29s @tqni('KJ[ ]\̢Kc2:mcp`vj4#Iw\qbCX\ϽΎ9-O|o 'V )IXddPus;EQ/AxS4V()z EP0)ڪ }H':tRQtY)˧XL6.͈o :- CvAm6oLvO.,3Ī/}%x&mNJ.kiڹ=;CXQAiB Ge>bq8oPBvrź"ۓxdz9'cw9QT֣\FtidwxšcMWnxPPոiy# +OSUcJyU">ct] d)>{_H,~,X*L5py~Q#Њ"FΊ'İg/$7Æ{k"3L[gb8ĩu3TVV,=vz;-F-X"B.nuJ[HW_HjYmŬoq Fw1la/;lKœ"N!H(n5Z<í}x {R㧃db41obxKI1/SUh (6[.U ] 3o#O3 SoYAVXQrD~b=SLx=K7k)a%NhV6A{e3a5KgػBo7!@1vfkt;6Y󤧺V&yh~AϞ lIHSYi?W-5Jj$1[y[@)6f1 (OH'SlC{E$zMβ*,ɽ(4:{WH:[u6deǴ0 }rqbiO.uuʕVζ(lX#yl `~<8~=:z<W79 !3xn/ v5:iSْIs*Q6Lq.c23*'x|ڜKy8`$)cFnvİ24)+DtՔtsh#nH᭘SlU1՘V ⫯' X:#Na.! :ý #(ZdG cCoZN6R!wxIȡ*zv0-iy61mb0gs0JsU|b09{Ek[ e+ҩ/r.Ԃյm伒͵IQ!,LtSsmwT nC2 ձ_uY%x07VOo̘=@` ob'[Ï}eN>`ӱSb4r'0yl nsiF0ұM5Ÿ9NLWVCv'fJ[n*qh#ҦԀ۸(|rXG?1jK/JGKӛ3 h$[:g0ǺY=JȟK-T7S2겯('$® Q#yw P,PjpjDu"Ұ4!Đ.LnWH@p3v̥SŌ_ 서C1@ZWNŸ)/Ɉ`"l?"P'tk$,l 6RB.s&zc3a`}s,톨@gK֪'%Nm!Oox\Rb`o14qwUt|w`/q"l]\_ͫqy.q8:,b ':k8=<ׇ__|pЛ\l Awo7uo7}zݹ } \1gz1+V/;AԣB,VkRn_'sMwF4/h1Tj@88B qqY!n *&D|gxr S`l|ڍd,(G 8:%euP^q(Å9T 'H=-Œ-NGi`M9V8Dڥ:=uV"1ƽ BVf& @b혁LqHX0GºJAֽMAo`FDYCxDׂLТBAS;[*!kI;rE`]Py#?3 PRI®ɵq&[x \p -}º!=8E8As:BޢԪ %Q&b\XgR>UkW g0 0uG45a[~m/TGoċ 'Ա1"8w B XǙ[+<|jĶq`64An}`;-0GYNν]c\0#au%bH hrXKW2q x$ I9V>+FK3Va8@f^rLR'Bgy:x4u:; !ا B߁Fs$)R p-4%.~گÿcƮX,1?>Zڦas - G}1H^*ZeYUjj u׊   CP 4v UU6mܘBftRRd G׫4D #cf磖1=|_XUB U36O5z|B_"dX)I5<_3]9_NiOr'3VDE 3zwE&ZHcɾs?!+c"eH[o]%Wx\%$qGmCzt6HgIk[noFY̱ ”Mf;- @b,* Lאvq)9c13)H/1%܃LEص2,?F8Wˍ MG3U2ɣbɲ!r xyzk::-fF&h_ tL`fT?Rɗ:I*kX=| dMR&)ChlV}k9[ܶQ&}lPj +Uh#=SKaO}T_lG6QoBS-1wɧnCz.D(}ZIke=QCʕLy"N00ou԰6؂Py}sOC,|q gPdn j[ڥC1TBFSV踚0}R>^t‹u*r8 .s#1ooްJ={MTNۺ~3b>dP|ޒb~:$=` Pkm4~1&.f0t3м8-we 0<;hZl R;Ok7wfpaSC}=b#ցU5i  L,ޖ.E qV,u&(B!2avv9gHIF+Xx=YuW /S׳¶*ģ3#lf78<&E_<K]93[u,[Γ뛬9p)`NEU(])F՜ B*NhuJ$Yav$LIn'a5 L=\:X.3ࢴ W瑑FXjS+,Rߐ\_E*wOIm/x[7bW%,6ߒiԲEќ}!J A/"@B`fN$OP4SaBWZADr.tXa 8w/p{&>cB!{p.Jr}LɈ┏aIӣu R? o.ox@oH>րc [ZữR0-c L`҃zm_vէw%*Zz#@_ UDy+Vw 4`ՈSl-El!8WY 2n)͹431T$QS648MuJؖaZu.L?:$^^Z[{KwDSŠ<7؉iHTsda1elǬo~WTV@al#U_mPHJoPYc\ReZ_Ȓu$3I*ﰑ6;"UȧuqN9ԩUBU(qU:T2ELeQ TJ(SĤiuN7?>PVu8ofhaevrnThr#IcaT!'4=t`n +/x_39Ya:#E3'Tvt|N-)9*w UНewyN[gHo?u_G?"|~|?_T d(Ή(†=uS ซ3Q$THPbȑ;ĢcNPG,Q I%u68sX(gl]NN33 }{b/K|56PAHzbPӄE A fT%"u%6 (c`Lò7Ȯlr%~~{xo81FAoha˰/1kbh, (56VyRz(JvHYSV'j[/}#N{*wtfRD!3l62G6Mz8<\ `-={+Xv/z+ |w77^>_pR2Fw;Khh]LL/Q}`hdvkۋJDF2xBt66669Ѷ9VFBco6N:UN qy w֜T5t[ qNYA7#Kw٨xԸtTjس0N2UL I_AzP5$>F%,+j#=NR*Ŝ??0 lSsdHҖ.x|.TJFن%|-[90ARįVNԡر9AF5V+ 59kkw{7D/bYZ_,=fB&ݛl`0;d뽺 xm8埠1_(AM¡]6_thfL N"FhZv 2B wKǟo{L|0byRsyα8n$Ͽ+v b>p8 -q>j <#ϗ'+kG'egK?/,/ќy Ynr)VDuP{2fM VRȕk9=)*3?=>];MZoֆ>TC!W˪egtֶ=NzUšo% :}G'_]|jT1hʤc3N)7F% _εZSM~/WRPDPZ1Sx#"-Ђ➝|갓NlGmpjt>twKZâG/a0x }(pk6tu4?=agϯ?~{o_ۗ$$E-}xJG^ꔣfSip\ftT5hBCE|!$[7:$. N93b=X_7:E\^M/[y2<%]~YW;n燏oiyuiP;j{(7?] Lwj/{c "brӛ658Jd7Ah:n1n*8h25SyȬghٹ=WO EDo_eD ϗ"}ʽ@w癨 ډph_?Y@BPn(QUuɚzF/su!ksugIs:W`LAA=a5oOEan : r1;Aaғ 2ضIf'd^ƕ iKgawD\D{زhoN?e_^ZxxU chD֢KNr AK}+:TL,R( *fҔ( j)SUZ.GFrp:M??l(.csl3h?"() K3˻#o!&` ϫBU".-5n=ypm1[$W^ M Ա'У 2Z,@ςeI]:FV;-GFbl'_zJ (ǭx(%56,K? rk.y*rȊp8M`MPHvIPC9ܓb) [*^:bEeI;Ʈqzn_wqwZ3SQ@n@{(@‚ݗ_}_~{HOTd6Ytɢ"w$ oZMc _M`zV(fOi {[qgTbJ1 3pC) L Ed2UZ6;Ɏ 0}([IhѧE! c_L6qBa2)<Z(kR g<:<ú vb/W-rU՟qE=CNT~MP@H 3}g([P^Snӻ5pblѧG_dlNyJ񮚁gx)-?˗LdV)x;+uù9PhUZL P i4kvVSNU!]+TqTC !84Q?Ԝo.`Nl2w+pXc kYa * \X% 7>)u||vҪp9<e`l÷r!a>υiN0e~}T``b Le{(_ iq1>#7h0jjLtM $W:NU5PXBlW È*x J} j&(™lI9hyFd/J'%)hǧ縇Bl8bdZh qk63h_gM8⯮8Ȅ*5vTwa._kjK=8?.KJk\a}ȃK!kdma(+..EMނσmq)^C^aԔ>?}=|Y _..ݣ{,t{Xe`@t|‰XajuOf7&vdN<6zd葠ӂS='5G.GO}AxZxs;Pa)}u:$M,Q\pBj1r8TN4S"uaQǯվ{/·Xn:߳kF];al7⁝eUl-R.͉Bc%dAؕk:EX(^jY !9LR'eV:*]j%ƍ6V)"m*) aϞo\s)P|_OE6c-TTtV<GySp{ap{n8Epצ%N 9׀]rbHRl& 1Y<y2]1ۣ/Z"4.mzr$%XpbG14-p\e#~E,Ol@h2/dS~zpHPܳb1nhSʞz6ؚ^d{oX+KXv4eZ+קJ33F- 0eҗ{%wCR? 'uW4غ?~C?>_Q}gΆc~ޔNząƛF/$LjW-jW1KmJUL6#F1l=v(|[z$N)n_Qgq^~ KಧqಸkP>Lyb'Q SvΔ)e&!#lz)tW~gG'xN6Oq]\6݂d)}a~ 'h7`pJX(>'ȁ>= ȃOv\)*9n20K4`b'*cW5  %Mj3M];a0n;Vk.c;G/orˣo[}cH0f4IԌɥWmpZ’ԁ,YZ&:0ҮI9g0Q玴AaA77?d)[*` ֆzUl ^\h}ʕuxHj_S%CsYwܮ!]]*!ꓖ@>dZL>n~S+ *./ߗ>0iooPDw휷ziv8F"9 \6A+$=:!\oQ.zK1WV\$,wP30Ī\ZW!Pܼ傥:v@B7_uWO㮝0FƆAOuَ67̞d3ZȤB&; J5#j߭6/#i(#A . m&b&-:u/9$4.6|R΄٣9 c-,p%݁[iM\wh%/_ī!w+ wx>#JR,-~+ˬH nrq4a*;}*x8/}]3-$@Ø(r)R1Lպ;YZM5S*t7k [A+">I>~~vBn܈v 2G ^AcVrQqu8B847_|YVU&qKD"]֝a@,L ۓyD_pdz{Q'4dWNX} G/STT]8cqNHaƍx`-L5? `kR 4uYp_yȐkIeZrt>=GryEuGn= 4IdOV7*ȥ]e#H!|qby{sJEٖ/΢ւ@)T0*tx Qڌ/)y3Zf+\^A!H!d0Hڛ fзpCx4 @m6Ƕt(zt8#TJPt j2Yի^=jys%"2# +RwIY]&fCZ(N}vvo2IO>GLz '<L|b0i vJڊvba^rj+p DE)88 kf kuNǨũ58}ȖȲb%L!n_%28ĥ.U# OF%wQx Y-q{s@ĘU&'oK:Pe*+59>#{LGq<$hT` Ju]38\8! 9c .4Kɑ+ijRePEa\6ϧ^b[l=^2wKU*ϥ٣HA M񩖀 z:Sfj`Hmrm82,Hs fׂ2K&cؑ-1xR{gDctflҲהP*-mBH ;wVyQmhyxآӞ"D!S}$s֨΂䭩k\{ $s,a-mV~8M4hzhYПMTT6T[ۅUz\j ׸o'1V<38Jp@MN|jw]Ƣ>Xt?x*{? Z dUص`\N}D˞( 7@"_96@U#JfzK ̒LAt%p4+Ƹk'lbوvFm0BQc5BN}E\rϛ{f4>eY:c. _aGJƥJ02QܙNE8T2RLVd @AjRU[G1~ݗb(e㗻_R5XݰJ "5xt/;> o !HH>Ud - X`л,6BN3 r_C"4 )xe@YA4VsWXZj`)9Г 4,r%ӪL $<(RRRZ<]XMV|?*w?at 6߽ɮ7_m}Yʚfj4V+RZV$2r$ȁ }623z۝v; G/|N1xlfhk;WI~ElyZ]_=xH4JGirQemGf6b)z&8$]ƻޥK|ŋ2"Qx8T1|.ˍRSXx=, rm aQcA;k=d k$]^ H?yKD\W[NW`oٹNE|ImC/jgհY9ebb!sBjRY*}E 4,fp |@u>}~1T 'Fr_jܷ xhgrlE"]$N/QLgԷ8WJ܌^q̕<6m!s="BؗlC)O =Ŷؚ^gL53GDO {h:GѦ?7op-hJ64dl B'ˎ&6Hp">IːBKslm'9GԤj/ FpMr0#1ͣ Z+: 5i{=oR,jVdHݸ`je3AlTy(gh띞(JQ YIrDUrj V`hȖ6`_JNkƸw)%l WوSM ~u3`m3*$5B$qI A :y4^b~QPq]wi7h_r3!w68wdN:cقF.>0ANeԣPy@tH4&ԬjI.Y|U!>!ևeHUOs'I//OKaz\tȇ};aPm#;3l`r< Lm4=. :值s,w@1T׌ZC؍Cj'ɭ;Uh{r릲)򝔜4RF6ё&(4J{,(F<"IlEBgPuA#d9jah}_&գrNI8 8DVŖB8#dl[>%b˥l6(a|Q ~%T sXE"Ψnb=dܴԣЋ6DNuudDJ7xf%j8^zuCWM]n&uӸ̧pL#mvJCZl0' :`+$y+&)eKu8qu^oo~w݇:6D Aɧ-[@H }j/r HjTK!adXzIA=/ɱWYD#ec iv@TbxM*HҨ"g!l& jѿ.LmM6Zs܅.3Nn.`KWV/?=QFM&ք2oQn08)|#vr*IJTՀLšF=np fvZ4E ~CNC-?^MI #l_C*C5% ZsbBsO(QG V< UXC;T{wR nđ tKF^p!8B \S)K.dIRovH`T9:l\&.L/Q%BQ y q2e V[}RrCpKTRL:jGO[(xӨ+$V~Gx@%֌ރ$:+ nխzxs`XQN\VcG%gꦣ~Xʰ0E(Tڀ|#.gܝq&ɫbgS~<SSꤔ@YsDu&!$(ɵa׫q$t._Z<1mQ҉ndԀ'eG5M<*R(`g|秸\%jyߟ㎝KqN@o~m 7?O^V;4LHpsޒtH3`jW$$m+jJRh,89XP'BG]OB:-4(Dֻ%*zm08~jo!xO/g3wһwy #\!VIw&WG)e1^&#=^׮DgB8) ƌ'H#ۗNRɔ:cH^Q3i!$E@3JeJ@԰*,ɏc-8+EURòcC8cEe멦@*}ޗy`%0AOk'dؕx`YBAKllP8߉0!"΀=o]W:<0Ig-Ҳ a;Y8ד8i zvqlUv`QFxw dIX$7kR kR|M:9'S۾xQ4`ɴ`")_X6VzM AFEd~Lct]k JʹaŞ@HDŖ=M@yC§`K',7ğM$ *B nv T3Hcc.jRH$?mK@y4kWuls4~4!1¼6e˧;%!4ĖasyN^î: `,e/WBqM =R8^Y L\W173M k7?NPg/>sn`,cŅe?%-ňI˃i3OewB =(dkr{[ג bjUJx@ ӯKLadR@cb"ݭը[ iL7)=PUP%@;4wzE!޿~.kaHi fSw;F/r_$ސe2.<(-J!Uy\Ep3g-cXYX$*6%dzNy=7 {Iy 8RD4}G dMF#lt'AVCR1F9fNjum=bb'G+|AEεh(?\TUud7XꬃרX^\GBz.[P ,Zb5e{s8q=hK`Tr%J7+U3 l%/F^&<J}P)c,>ѫ&)g#›S;crK90ICx[ o1Ֆ+-ۧw1 ͱb^6A Ά=bIJ5Vw^KA\oOezw_;e_(R7[+iw.M.28A>&$̎6r f׀S;=A,N]/r9o*SVYB7E?Eaoaugur-24.2.2/tests/functional/filter/data/tb_metadata.tsv000066400000000000000000000744761456376326500234740ustar00rootroot00000000000000strain accession date region country location db authors cluster paper_url title G22670 10155 1991-XX-XX north_america canada village_k genbank Lee et al Mj-I http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22671 10223 1992-XX-XX north_america canada village_d genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22672 11011 1991-XX-XX north_america canada village_k genbank Lee et al Mj-I http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22673 11234 1992-XX-XX north_america canada village_k genbank Lee et al Mj-I http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22674 14069 1993-XX-XX north_america canada village_k genbank Lee et al Mj-I http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22675 14508 1993-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22676 15613 1994-XX-XX north_america canada village_e genbank Lee et al Mj-V.d http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22677 16490 1995-XX-XX north_america canada village_e genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22678 16493 1995-XX-XX north_america canada village_k genbank Lee et al Mj-I http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22679 18421 1996-XX-XX north_america canada village_k genbank Lee et al Mj-I http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22680 18422 1996-XX-XX north_america canada village_k genbank Lee et al Mj-I http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22681 18747 1996-XX-XX north_america canada village_k genbank Lee et al Mj-II http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22682 18988 1996-XX-XX north_america canada village_k genbank Lee et al Mj-II http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22683 19057 1996-XX-XX north_america canada village_k genbank Lee et al Mj-II http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22684 19276 1996-XX-XX north_america canada village_k genbank Lee et al Mj-II http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22685 50045 1996-XX-XX north_america canada village_d genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22686 50179 1997-XX-XX north_america canada village_k genbank Lee et al Mj-II http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22687 50248 1997-XX-XX north_america canada village_d genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22688 53221 1998-XX-XX north_america canada village_c genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22689 54902 1999-XX-XX north_america canada other_village genbank Lee et al Mj-IV.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22690 55546 2000-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22691 55753 2000-XX-XX north_america canada village_b genbank Lee et al Mj-VI http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22692 55988 2005-XX-XX north_america canada village_b genbank Lee et al Mj-VI http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22693 55989 2000-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22694 56828 2000-XX-XX north_america canada other_village genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22695 57052 2001-XX-XX north_america canada village_k genbank Lee et al Mj-II http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22696 58385 2001-XX-XX north_america canada other_village genbank Lee et al NA http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22697 60053 2002-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22698 62796 2004-XX-XX north_america canada village_e genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22699 62806 2004-XX-XX north_america canada village_d genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22700 62957 2004-XX-XX north_america canada village_d genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22701 63113 2004-XX-XX north_america canada village_d genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22702 63670 2004-XX-XX north_america canada village_k genbank Lee et al Mj-II http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22703 63878 2004-XX-XX north_america canada village_c genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22704 64165 2004-XX-XX north_america canada village_k genbank Lee et al Mj-II http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22705 64334 2005-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22706 64712 2005-XX-XX north_america canada village_d genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22707 65165 2005-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22708 66591 2006-XX-XX north_america canada village_c genbank Lee et al Mj-V.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22709 68995 2007-XX-XX north_america canada village_k genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22710 73787 2010-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22711 74856 2010-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22712 78932 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22713 79031 2012-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22669 9965 1991-XX-XX north_america canada village_d genbank Lee et al Mj-IV.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22589 MT-0080 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22668 MT-0712 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22582 MT-0718 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22587 MT-0972 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22590 MT-1103 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22591 MT-1128 2011-XX-XX north_america canada village_b genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22592 MT-1167 2008-XX-XX north_america canada village_b genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22593 MT-1206 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22666 MT-1212 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22594 MT-1247 2012-XX-XX north_america canada village_a genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22714 MT-13-1408 2013-XX-XX north_america canada village_a genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22715 MT-13-1711 2013-XX-XX north_america canada village_a genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22716 MT-13-1712 2013-XX-XX north_america canada village_a genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22717 MT-13-1753 2013-XX-XX north_america canada village_a genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22718 MT-13-1828 2013-XX-XX north_america canada village_a genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22719 MT-13-1835 2013-XX-XX north_america canada village_a genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22720 MT-13-1892 2013-XX-XX north_america canada village_a genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22721 MT-13-2012 2013-XX-XX north_america canada village_a genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22722 MT-13-2334 2013-XX-XX north_america canada village_a genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22723 MT-13-2384 2013-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22725 MT-13-2690 2013-XX-XX north_america canada village_a genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22726 MT-13-2761 2013-XX-XX north_america canada village_a genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22727 MT-13-3209 2013-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22728 MT-13-848 2013-XX-XX north_america canada village_a genbank Lee et al Mn http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22595 MT-131 2011-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22596 MT-1336 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22597 MT-1345 2011-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22598 MT-1393 2008-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22599 MT-140 2009-XX-XX north_america canada village_c genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22600 MT-1403 2009-XX-XX north_america canada village_e genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22601 MT-1466 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22602 MT-1499 2011-XX-XX north_america canada village_c genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22603 MT-1549 2008-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22604 MT-1605 2008-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22605 MT-1684 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22606 MT-1799 2011-XX-XX north_america canada village_d genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22607 MT-1838 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22608 MT-1971 2011-XX-XX north_america canada village_c genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22609 MT-2151 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22610 MT-2174 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22611 MT-2175 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22612 MT-2178 2011-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22613 MT-2184 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22614 MT-2224 2008-XX-XX north_america canada village_e genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22615 MT-2356 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22616 MT-2465 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22617 MT-2473 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22618 MT-2474 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22619 MT-2538 2011-XX-XX north_america canada village_c genbank Lee et al Mj-V.d http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22620 MT-2665 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22621 MT-2667 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22622 MT-2706 2010-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22623 MT-2720 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22624 MT-2762 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22625 MT-2768 2009-XX-XX north_america canada village_e genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22626 MT-2769 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22627 MT-2771 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22628 MT-2792 2006-XX-XX north_america canada village_c genbank Lee et al Mj-V.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22629 MT-2800 2010-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22631 MT-289 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22632 MT-2905 2006-XX-XX north_america canada village_c genbank Lee et al Mj-V.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22633 MT-2910 2006-XX-XX north_america canada village_c genbank Lee et al Mj-V.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22634 MT-2931 2006-XX-XX north_america canada village_c genbank Lee et al Mj-V.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22635 MT-3000 2009-XX-XX north_america canada village_c genbank Lee et al Mj-V.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22636 MT-3004 2009-XX-XX north_america canada village_c genbank Lee et al Mj-V.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22637 MT-3074 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22638 MT-3173 2009-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22639 MT-3194 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22640 MT-3239 2006-XX-XX north_america canada other_village genbank Lee et al Mj-V.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22641 MT-3255 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22642 MT-3271 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22643 MT-3281 2010-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22644 MT-3296 2011-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22645 MT-3341 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22648 MT-3673 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22649 MT-3683 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22651 MT-3787 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22652 MT-389 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22653 MT-393 2009-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22729 MT-398 2005-XX-XX north_america canada other_village genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22654 MT-405 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22655 MT-4067 2007-XX-XX north_america canada village_d genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22656 MT-4137 2010-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22667 MT-4166 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22730 MT-4230 2010-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22657 MT-441 2011-XX-XX north_america canada village_c genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22731 MT-4466 2011-XX-XX north_america canada village_d genbank Lee et al Mj-IV.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22658 MT-452 2011-XX-XX north_america canada village_c genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22659 MT-467 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22660 MT-4683 2011-XX-XX north_america canada village_d genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22661 MT-4846 2011-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22662 MT-4854 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22663 MT-4884 2011-XX-XX north_america canada village_c genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22664 MT-4942 2007-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22665 MT-504 2011-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22565 MT-5195 2007-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22566 MT-5337 2007-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22567 MT-5373 2009-XX-XX north_america canada other_village genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22568 MT-5383 2007-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22569 MT-5447 2011-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22732 MT-5488 2007-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22570 MT-5531 2011-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22571 MT-5543 2007-XX-XX north_america canada village_k genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22572 MT-567 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22733 MT-578 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22573 MT-5870 2009-XX-XX north_america canada other_village genbank Lee et al Mj-IV.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22574 MT-5983 2011-XX-XX north_america canada village_k genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22575 MT-6084 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22576 MT-6205 2011-XX-XX north_america canada village_a genbank Lee et al Mj-V.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22577 MT-6218 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22578 MT-6226 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22579 MT-6429 2012-XX-XX north_america canada village_k genbank Lee et al Mj-III.b http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22580 MT-661 2009-XX-XX north_america canada village_c genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22581 MT-692 2009-XX-XX north_america canada village_c genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22583 MT-721 2008-XX-XX north_america canada village_a genbank Lee et al Mj-III.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22584 MT-751 2008-XX-XX north_america canada village_b genbank Lee et al Mj-V.a http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22585 MT-853 2011-XX-XX north_america canada village_c genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22586 MT-877 2010-XX-XX north_america canada other_village genbank Lee et al Mj-IV.c http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22650 None1 20XX-XX-XX north_america canada ? genbank Lee et al http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit G22724 None2 20XX-XX-XX north_america canada ? genbank Lee et al http://www.pnas.org/content/112/44/13609 Population Genomics of Mycobacterium tuberculosis in the Inuit augur-24.2.2/tests/functional/frequencies/000077500000000000000000000000001456376326500205625ustar00rootroot00000000000000augur-24.2.2/tests/functional/frequencies/cram/000077500000000000000000000000001456376326500215045ustar00rootroot00000000000000augur-24.2.2/tests/functional/frequencies/cram/_setup.sh000066400000000000000000000000701456376326500233340ustar00rootroot00000000000000export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" augur-24.2.2/tests/functional/frequencies/cram/diffusion.t000066400000000000000000000032741456376326500236650ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Calculate diffusion-based tip frequencies from a refined tree. $ ${AUGUR} frequencies \ > --method diffusion \ > --tree "$TESTDIR/../data/tree.nwk" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --pivot-interval 3 \ > --output tip-frequencies.json > /dev/null $ cat tip-frequencies.json { "BRA/2016/FC_6706": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "COL/FLR_00008/2015": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "Colombia/2016/ZC204Se": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "DOM/2016/BB_0183": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "EcEs062_16": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "HND/2016/HU_ME59": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "PAN/CDC_259359_V1_V3/2015": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "PRVABC59": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "VEN/UF_1/2016": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "ZKC2/2016": { "global": [ 0.1, 0.1, 0.1, 0.1 ] }, "counts": { "global": [ 0, 5, 5, 0 ] }, "generated_by": { "program": "augur", "version": ".*" (re) }, "pivots": [ 2015.7521, 2016.0041, 2016.2527, 2016.5014 ] } (no-eol) augur-24.2.2/tests/functional/frequencies/cram/kde-min-max-date.t000066400000000000000000000011231456376326500247100ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Calculate KDE-based tip frequencies for a time period with fixed dates. Pivots get calculated from the requested date range. $ ${AUGUR} frequencies \ > --method kde \ > --tree "$TESTDIR/../data/tree.nwk" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --pivot-interval 3 \ > --min-date 2015-01-01 \ > --max-date 2016-01-01 \ > --output tip-frequencies.json > /dev/null $ diff -u --ignore-matching-lines version "$TESTDIR/../data/zika_tip-frequencies_with_fixed_dates.json" tip-frequencies.json $ rm -f tip-frequencies.json augur-24.2.2/tests/functional/frequencies/cram/kde.t000066400000000000000000000010731456376326500224350ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Calculate KDE-based tip frequencies from a refined tree. Timepoints used to estimate frequencies (i.e., "pivots") get calculated from the range of dates in the given metadata. $ ${AUGUR} frequencies \ > --method kde \ > --tree "$TESTDIR/../data/tree.nwk" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --pivot-interval 3 \ > --output tip-frequencies.json > /dev/null $ diff -u --ignore-matching-lines version "$TESTDIR/../data/zika_tip-frequencies.json" tip-frequencies.json $ rm -f tip-frequencies.json augur-24.2.2/tests/functional/frequencies/cram/weights.t000066400000000000000000000020771456376326500233510ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create input files. $ cat >metadata.tsv <<~~ > strain date region > SEQ1 2021-01-01 A > SEQ2 2021-01-02 B > SEQ3 2021-01-01 C > SEQ4 2021-01-02 C > SEQ5 2021-02-02 D > ~~ $ cat >weights.json <<~~ > { "A": 2, "B": 1, "C": 1, "D": 0 } > ~~ $ cat >tree.nwk <<~~ > (SEQ2,SEQ3,SEQ4,SEQ5)SEQ1; > ~~ Weight by region. $ ${AUGUR} frequencies \ > --method kde \ > --tree tree.nwk \ > --metadata metadata.tsv \ > --weights weights.json \ > --weights-attribute region \ > --output tip-frequencies.json >/dev/null $ cat tip-frequencies.json { "SEQ2": { "frequencies": [ 0.5, 0.5 ] }, "SEQ3": { "frequencies": [ 0.0, 0.0 ] }, "SEQ4": { "frequencies": [ 0.5, 0.5 ] }, "SEQ5": { "frequencies": [ 0.0, 0.0 ] }, "generated_by": { "program": "augur", "version": ".*" (re) }, "pivots": [ 2021.0041, 2021.2507 ] } (no-eol) augur-24.2.2/tests/functional/frequencies/data/000077500000000000000000000000001456376326500214735ustar00rootroot00000000000000augur-24.2.2/tests/functional/frequencies/data/metadata.tsv000066400000000000000000000075461456376326500240250ustar00rootroot00000000000000strain virus accession date region country division city db segment authors url title journal paper_url PAN/CDC_259359_V1_V3/2015 zika KX156774 2015-12-18 North America Panama Panama Panama genbank genome Shabman et al https://www.ncbi.nlm.nih.gov/nuccore/KX156774 Direct Submission Submitted (29-APR-2016) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ COL/FLR_00024/2015 zika MF574569 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574569 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ PRVABC59 zika KU501215 2015-12-XX North America Puerto Rico Puerto Rico Puerto Rico genbank genome Lanciotti et al https://www.ncbi.nlm.nih.gov/nuccore/KU501215 Phylogeny of Zika Virus in Western Hemisphere, 2015 Emerging Infect. Dis. 22 (5), 933-935 (2016) https://www.ncbi.nlm.nih.gov/pubmed/27088323 COL/FLR_00008/2015 zika MF574562 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574562 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ Colombia/2016/ZC204Se zika KY317939 2016-01-06 South America Colombia Colombia Colombia genbank genome Quick et al https://www.ncbi.nlm.nih.gov/nuccore/KY317939 Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples Nat Protoc 12 (6), 1261-1276 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538739 ZKC2/2016 zika KX253996 2016-02-16 Oceania American Samoa American Samoa American Samoa genbank genome Wu et al https://www.ncbi.nlm.nih.gov/nuccore/KX253996 Direct Submission Submitted (18-MAY-2016) Center for Diseases Control and Prevention of Guangdong Province; National Institute of Viral Disease Control and Prevention, China https://www.ncbi.nlm.nih.gov/pubmed/ VEN/UF_1/2016 zika KX702400 2016-03-25 South America Venezuela Venezuela Venezuela genbank genome Blohm et al https://www.ncbi.nlm.nih.gov/nuccore/KX702400 Complete Genome Sequences of Identical Zika virus Isolates in a Nursing Mother and Her Infant Genome Announc 5 (17), e00231-17 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28450510 DOM/2016/BB_0059 zika KY785425 2016-04-04 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785425 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 BRA/2016/FC_6706 zika KY785433 2016-04-08 South America Brazil Brazil Brazil genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785433 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 DOM/2016/BB_0183 zika KY785420 2016-04-18 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785420 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 EcEs062_16 zika KX879603 2016-04-XX South America Ecuador Ecuador Ecuador genbank genome Marquez et al https://www.ncbi.nlm.nih.gov/nuccore/KX879603 First Complete Genome Sequences of Zika Virus Isolated from Febrile Patient Sera in Ecuador Genome Announc 5 (8), e01673-16 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28232448 HND/2016/HU_ME59 zika KY785418 2016-05-13 North America Honduras Honduras Honduras genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785418 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 augur-24.2.2/tests/functional/frequencies/data/tree.nwk000066400000000000000000000007311456376326500231540ustar00rootroot00000000000000((Colombia/2016/ZC204Se:0.00105368,(PAN/CDC_259359_V1_V3/2015:0.00076051,(COL/FLR_00008/2015:0.00044440,VEN/UF_1/2016:0.00089377)NODE_0000008:0.00038502)NODE_0000007:0.00019253)NODE_0000001:0.00080159,(BRA/2016/FC_6706:0.00214920,(ZKC2/2016:0.00173693,(HND/2016/HU_ME59:0.00206150,PRVABC59:0.00135309)NODE_0000004:0.00013537,(EcEs062_16:0.00175918,DOM/2016/BB_0183:0.00184905)NODE_0000002:0.00021565)NODE_0000003:0.00013737)NODE_0000005:0.00019772)NODE_0000006:0.00100000; augur-24.2.2/tests/functional/frequencies/data/zika_tip-frequencies.json000066400000000000000000000024641456376326500265150ustar00rootroot00000000000000{ "BRA/2016/FC_6706": { "frequencies": [ 0.022368, 0.011759, 0.207309, 0.102551 ] }, "COL/FLR_00008/2015": { "frequencies": [ 0.244555, 0.204597, 0.008456, 0.010737 ] }, "Colombia/2016/ZC204Se": { "frequencies": [ 0.12489, 0.234574, 0.013671, 0.017245 ] }, "DOM/2016/BB_0183": { "frequencies": [ 0.017736, 0.009645, 0.185763, 0.148494 ] }, "EcEs062_16": { "frequencies": [ 0.018817, 0.010092, 0.192704, 0.134289 ] }, "HND/2016/HU_ME59": { "frequencies": [ 0.009425, 0.006444, 0.093589, 0.456546 ] }, "PAN/CDC_259359_V1_V3/2015": { "frequencies": [ 0.225577, 0.211235, 0.008761, 0.011258 ] }, "PRVABC59": { "frequencies": [ 0.244555, 0.204597, 0.008456, 0.010737 ] }, "VEN/UF_1/2016": { "frequencies": [ 0.030336, 0.017436, 0.204461, 0.07079 ] }, "ZKC2/2016": { "frequencies": [ 0.06174, 0.089622, 0.076833, 0.037353 ] }, "generated_by": { "program": "augur", "version": "19.2.0" }, "pivots": [ 2015.7521, 2016.0041, 2016.2527, 2016.5014 ] }augur-24.2.2/tests/functional/frequencies/data/zika_tip-frequencies_with_fixed_dates.json000066400000000000000000000024621456376326500321050ustar00rootroot00000000000000{ "BRA/2016/FC_6706": { "frequencies": [ 0.0, 0.0, 0.0, 0.0, 0.0 ] }, "COL/FLR_00008/2015": { "frequencies": [ 0.34254, 0.340199, 0.337813, 0.34201, 0.329984 ] }, "Colombia/2016/ZC204Se": { "frequencies": [ 0.0, 0.0, 0.0, 0.0, 0.0 ] }, "DOM/2016/BB_0183": { "frequencies": [ 0.0, 0.0, 0.0, 0.0, 0.0 ] }, "EcEs062_16": { "frequencies": [ 0.0, 0.0, 0.0, 0.0, 0.0 ] }, "HND/2016/HU_ME59": { "frequencies": [ 0.0, 0.0, 0.0, 0.0, 0.0 ] }, "PAN/CDC_259359_V1_V3/2015": { "frequencies": [ 0.314921, 0.319602, 0.324374, 0.31598, 0.340033 ] }, "PRVABC59": { "frequencies": [ 0.34254, 0.340199, 0.337813, 0.34201, 0.329984 ] }, "VEN/UF_1/2016": { "frequencies": [ 0.0, 0.0, 0.0, 0.0, 0.0 ] }, "ZKC2/2016": { "frequencies": [ 0.0, 0.0, 0.0, 0.0, 0.0 ] }, "generated_by": { "program": "augur", "version": "19.2.0" }, "pivots": [ 2015.0014, 2015.2479, 2015.4973, 2015.7493, 2016.0014 ] }augur-24.2.2/tests/functional/frequencies/data/zika_tip-frequencies_with_relative_dates.json000066400000000000000000000017621456376326500326230ustar00rootroot00000000000000{ "BRA/2016/FC_6706": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "COL/FLR_00008/2015": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "Colombia/2016/ZC204Se": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "DOM/2016/BB_0183": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "EcEs062_16": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "HND/2016/HU_ME59": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "PAN/CDC_259359_V1_V3/2015": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "PRVABC59": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "VEN/UF_1/2016": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "ZKC2/2016": { "frequencies": [ 0.0, 0.0, 0.0 ] }, "generated_by": { "program": "augur", "version": "19.2.0" }, "pivots": [ 2022.0178, 2022.2644, 2022.5137 ] }augur-24.2.2/tests/functional/index.t000066400000000000000000000011401456376326500175410ustar00rootroot00000000000000Integration tests for augur index. $ pushd "$TESTDIR" > /dev/null $ export AUGUR="../../bin/augur" Index Zika sequences. $ ${AUGUR} index \ > --sequences index/sequences.fasta \ > --output "$TMP/sequence_index.tsv" $ diff -u "index/sequence_index.tsv" "$TMP/sequence_index.tsv" $ rm -f "$TMP/sequence_index.tsv" Try indexing sequences that do not exist. This should fail. $ ${AUGUR} index \ > --sequences index/missing_sequences.fasta \ > --output "$TMP/sequence_index.tsv" ERROR: Could not open sequences file 'index/missing_sequences.fasta'. [1] $ popd > /dev/null augur-24.2.2/tests/functional/index/000077500000000000000000000000001456376326500173605ustar00rootroot00000000000000augur-24.2.2/tests/functional/index/sequence_index.tsv000066400000000000000000000012551456376326500231200ustar00rootroot00000000000000strain length A C G T N other_IUPAC - ? invalid_nucleotides PAN/CDC_259359_V1_V3/2015 10771 2952 2379 3142 2298 0 0 0 0 0 COL/FLR_00024/2015 10659 2921 2344 3113 2281 0 0 0 0 0 PRVABC59 10675 2923 2351 3115 2286 0 0 0 0 0 COL/FLR_00008/2015 10659 2924 2344 3110 2281 0 0 0 0 0 Colombia/2016/ZC204Se 10608 2907 2332 3093 2275 0 1 0 0 0 ZKC2/2016 10807 2955 2389 3159 2304 0 0 0 0 0 VEN/UF_1/2016 10808 2958 2383 3152 2315 0 0 0 0 0 DOM/2016/BB_0059 10035 2563 2089 2741 2015 621 6 0 0 0 BRA/2016/FC_6706 10366 2747 2203 2915 2165 329 7 0 0 0 DOM/2016/BB_0183 10621 2910 2343 3099 2269 0 0 0 0 0 EcEs062_16 10812 2960 2388 3158 2306 0 0 0 0 0 SG_018 10659 2906 2367 3110 2257 19 0 0 0 0 augur-24.2.2/tests/functional/index/sequences.fasta000066400000000000000000003754231456376326500224110ustar00rootroot00000000000000>PAN/CDC_259359_V1_V3/2015 gaatttgaagcgaatgctaacaacagtatcaacaggttttattttggatttggaaacgag agtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgc taaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggac ttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattca cggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagagg ctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatg ctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttggcctcctgc tgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttgg acagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgtt atatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgcccta tgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaactt gggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagccg tgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaat caagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggtt tcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtca tatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtca gcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgtcgtcttggaac atggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggtta caacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcag acatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcag acactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggac tttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccg ggaagagcatccagccagagaatctggagtaccggataatgttgtcagttcatggctccc agcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaagg ttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctag gacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatga ataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacg ctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaagg acgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcaca cggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctg gccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactcct tgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtca cagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcgg tggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactg aaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttaca ttgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcacca ttggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagaca cagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatc aaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattc tcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctta tgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgg ggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctaca acgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattgg cagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaa tggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatg gagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacaga gattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtact tcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaat gcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtat ttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccg ttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattg agagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacat gtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatca tacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggaccc aaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggca ctaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactg caagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgt tctgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaa gcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccc ttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaa agatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaa tgagtgacctggctaagcttgcaatcttgatgggtgccaccttcgcggaaatgaacactg gaggagatgtggctcatctggcgctgatagcagcattcaaagtcagaccagcgttgctgg tatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcct cgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttctcatcaatg gttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatca ccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtgga gagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtg tgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacc ccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggcccccta gcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcag atatagagatggctgggcccatagccgcggtcggtctgctaattgtcagttacgtggtct caggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatg cggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttct ccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatga ccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacg tgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaa agggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacac aagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaag gatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcagg atctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgagg tgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaa tatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaactt caggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcg tgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactc ctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgc atcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaa caagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaag cccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaa cagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatca gagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagta tagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttca tgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatgg acaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatc attctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagctt gtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagt tccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgg gcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatac ttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgccc agaggagggggcgcataggcaggaatcccaataaacctggagatgagtatctgtatggag gtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttg acaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaag tagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaac tcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataa cctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagaca gtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtgga tggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctg ggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatga cagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaa gcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttt tggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggca tagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctct cggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtgg tgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatca tcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggaga gaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggat tctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaa ctttcattaccccagctgtccaacatgcagtgaccacttcatacaacaactactccttaa tggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacg catgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctga ccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgc aggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctg ttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggaga aaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcgga ccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtggg aaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacattttta ggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttgg tcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttga accagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgca gagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtccc gaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaagg tcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaag ttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgc aaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcgg ctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtgg aagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccag gagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagc gactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacac atgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacga gccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatg tgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaaga tcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacg agaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggt cagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtga ctggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttca aggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagca tggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtacca aagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagagg aaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtgg acaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgg gaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggt atatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatc actggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcg gatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactg ctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaacc aaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaaca aagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcga gacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacc tagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgt ggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggc tcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttg cacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtgga aaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaaca agctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactga ttggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctag caaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactga tggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacct ggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaaca gagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaaatggacag acattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagac cgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcatag gtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaag ggtccacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagcc acagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcc tatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcag aggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggc gaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaag agggactagtggttagaggagaccccccggaaaacgcaaaacagcatattgacgctggga aagaccagagactccatgagtttccaccacgctggccgccaggcacagatcgccgaatag cggcggccggtgtggggaaatccatgggtct >COL/FLR_00024/2015 tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttatt ttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggatt ccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaa gaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattct agcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttc agtggggaaaaaagaggctatggaaacaataaagaagttcaagaaagatctggctgccat gctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcgg aattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgc atactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacatt ggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccat gagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtg caacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacg gagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtc gcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggat attcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctc aacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcat caggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggt tgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgt cgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgcta tgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagccta ccttgagaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctg gggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatg ctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgtt gtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactga tgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggg gggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagattt gtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacat tccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagc actggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtca agaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaa gggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaa gggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaac actgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggt tccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgc taaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccacc atttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggca caggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaat ggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcatt gggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtc ctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaa tggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagc cgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtac aggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctga ctccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggat ctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgc aatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccat gtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggc ttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatgg tgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggagga tcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcatt agagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtga tctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatct gatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaataga agagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccag agagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtt tgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatc tctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcac aatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcc caggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatca catggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaa gaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgat cctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccacctt cgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagt cagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcat gctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacct gatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttcc acgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcac actgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctct gaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgc tgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaa gcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctgg agggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaat tgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacat cacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctaga tgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatact caaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctgg agcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgc tcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtag actgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactat gtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactg gggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctg ggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacat ccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctgga ttacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggact ttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggag gagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagct aactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagt ccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgc tgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaa tgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacg tctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccactt cacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcga ggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactc caactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctt tgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacgg caatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaa gacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaac tgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatg cctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcac acatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggaga tgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttga agcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcg acctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaag gaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggt tgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaa caccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagt gctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcatt caaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaac actgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcat gcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccct agagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtctt gatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgc atggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgt gttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaa ccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatga actcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagagga gggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccat ctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcata caacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaa agggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactc acaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgta cttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctgg catcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaat tgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccag cgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgc aacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttc actgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaac aagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaa atggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcagg catcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacggg aggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacct gcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgc cgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatga agaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtgga cgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatc atctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattg gcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactat gatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccact ctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaa aagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagt gaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctga agctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcgga aacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatga ggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaa accctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatgg tcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcac tcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacg gccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattagg ggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaag gttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttg tgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaaggg cagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttgg attcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggct gggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggat gtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatga agctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaa gtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagt tatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctct taacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttct agagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagag caacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagcc aattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaa ggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttg ctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccg ccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccg ggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacag aagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttcc aactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacat gcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagacccc agttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatc tctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacat ggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcg ctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtc aggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggaga agctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgct gcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcagga tgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcag ctgtggatctccagaagagggactagtggttagaggaga >PRVABC59 gttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaaca gtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaa aaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgag cccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcag gatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtct catcaatagatggggttcagtggggaaaaaagaggctatggaaacaataaagaagttcaa gaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgagg cgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggt cactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccat atcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggaca catgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccaga tgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatca caaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccaccag gaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgat tagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgc ttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgat tgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtat gtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggc acaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgga ggtaagatcctactgctatgaggcatcaatatcagacatggcttctgacagccgctgccc aacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaac gttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgac atgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatct ggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatga cacaggacatgaaactgatgagaatagagcgaaagttgagataacgcccaattcaccgag agccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacagg ccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaa ggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccaca ctggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgt cgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggc tgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaat ggataaacttagattgaagggcgtgtcatactccttgtgtactgcagcgttcacattcac caagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggac agatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagt tgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgat gctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaa gatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgt gagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttgg aggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatc attgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggtt gggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgtt gatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaa ggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacag gtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggga agatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagt agaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtggg atctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagct gccccacggctggaaggcttgggggaaatcgtatttcgtcagagcagcaaagacaaataa cagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaa cagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggt tagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaa ggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggag gctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacatt gtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccact cagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtga agagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatg tggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatg gtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggta tggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgac tgcaggatcaactgatcacatggaccacttctcccttggagtgcttgtgatcctgctcat ggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggc agtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaat tttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgct gatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattg gacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctc cgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaat acgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctgac accactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggg gtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcat ggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgtt gctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcct gatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggc cgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacat tgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccg gctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccc catgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagc cataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgc tctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgta cagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaaga gggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagg gagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatg gaagctagatgccgcctgggatgggcacagcgaggtgcagctcttggccgtgccccccgg agagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacat tggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtg tgggagagtgataggactttatggcaatggggtcgtgatcaaaaacgggagttatgttag tgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccctcgat gctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggag agttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagc tccaaccagggttgtcgctgctgaaatggaggaggcccttagagggcttccagtgcgtta tatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcca tgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatat tatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaac aagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccg tgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagag agcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgt tccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggt catacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtg ggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgt catagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggc tggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaa tcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaaga ccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcct catagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaa gcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgt ttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctt tgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccag acacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatca tgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagt gatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattga caacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggc ccaattgccggagaccctagagaccataatgcttttggggttgctgggaacagtctcgct gggaatcttcttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggt gactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgc atgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagca aagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctggg cttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatct aatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggcc agcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaaca tgcagtgaccacctcatacaacaactactccttaatggcgatggccacgcaagctggagt gttgtttggcatgggcaaagggatgccattctacgcatgggactttggagtcccgctgct aatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgct cgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccca gaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactga cattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcat agcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctgg ggctctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaa ctcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttc tctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacagg agagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttcta ctcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaa ggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggtt ggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagg gggctggagttactacgtcgccaccatccgcaaagttcaagaagtgaaaggatacacaaa aggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccg tcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtg tgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcct ctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtg cccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggagg actggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagc gaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgga cgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggc tgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggat ccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggc ttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggt tgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgac cgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgcc agacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaaga gctaggcaaacacaaacggccacgagtctgcaccaaagaagagttcatcaacaaggttcg tagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgga agctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgag aggagagtgccagagctgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggga atttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttct agagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcagg aggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcg tataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcag gtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcctt ggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagc tgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggaca agttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatat ggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagt gaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggaga tgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatga tatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactg ggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtc cattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccagg ggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggca gctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgt gccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatg gatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacca catggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggga agacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacat taaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggacta cctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagc accaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcc tgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatgg cacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccac gcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggg gcctgaactggagatcagctgtggatctccagaagagggactagtggttagagga >COL/FLR_00008/2015 tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttatt ttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggatt ccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaa gaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattct agcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttc agtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccat gctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcgg aattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgc atactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacatt ggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccat gagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtg caacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacg gagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtc gcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggat attcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctc aacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcat caggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggt tgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgt cgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgcta tgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagccta ccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctg gggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatg ctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgtt gtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactga tgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggg gggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagattt gtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacat tccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagc actggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtca agaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaa gggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaa gggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaac actgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggt tccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgc taaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccacc atttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggca caggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaat ggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcatt gggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtc ctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaa tggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagc cgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtac aggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctga ctccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggat ctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgc aatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccat gtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggc ttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatgg tgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggagga tcatgggttcggggtatttcacactagtgtctggatcaaggttagagaagattattcatt agagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtga tctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatct gatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaataga agagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccag agagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtt tgaggaatgcccaggcactaaggtccacgtggaggaaacatgtgaaacaagaggaccatc tctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcac aatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcc caggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatca catggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaa gaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgat cctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccacctt cgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagt cagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcat gctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacct gatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttcc acgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcac actgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctct gaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgc tgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaa gcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctgg agggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaat tgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacat cacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctaga tgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatact caaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctgg agcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgc tcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtag actgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactat gtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactg gggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctg ggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacat ccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctgga ttacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggact ttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggag gagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagct aactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagt ccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgc tgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaa tgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacg tctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccactt cacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcga ggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactc caactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctt tgattgggtgacagatcattctggaaaaacagtttggtttgttccaagcgtgaggaacgg caatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaa gacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaac tgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatg cctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcac acatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggaga tgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttga agcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcg acctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaag gaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggt tgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaa caccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagt gctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcatt caaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaac actgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcat gcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccct agagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtctt gatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgc atggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgt gttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaa ccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatga actcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagagga gggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccat ctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcata caacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaa agggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactc acaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgta cttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctgg catcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaat tgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccag cgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgc aacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttc actgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaac aagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaa atggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcagg catcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacggg aggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacct gcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgc cgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatga agaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtgga cgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatc atctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattg gcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactat gatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccact ctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaa aagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagt gaaatatgaggaggatgtgaatctcggctctggcacgcgggccgtggtaagctgcgctga agctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcgga aacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatga ggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaa accctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatgg tcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcac tcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacg gccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattagg ggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaag gttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttg tgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaaggg cagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttgg attcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggct gggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggat gtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatga agctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaa gtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagt tatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctct taacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttct agagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagag caacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagcc aattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaa ggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttg ctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccg ccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccg ggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacag aagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttcc aactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacat gcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagacccc agttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatc tctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacat ggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcg ctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtc aggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggaga agctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgct gcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcagga tgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcag ctgtggatctccagaagagggactagtggttagaggaga >Colombia/2016/ZC204Se gacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttg gaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgt caatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgcc agccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagccttttt gagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaa aaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaat aatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttgg cctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatat gtacttggacagaaaagatgctggggaggccatatcttttccaaccacattggggatgaa taagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatga atgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgac gtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctag aagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctg gttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaa ccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagcca aaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcat aggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgt cttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacataga gctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatc aatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaa gcaatcagacactcaatatgtttgcaaaagaacgttagtggacagaggctggggaaatgg atgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaa aatgaccgggaagagcatccagccagagaatctggagtaccggataatgttgtcagttca tggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatag agcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttgg aagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattactt gactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattacc ttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtaga gttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagc agttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggct gtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtc atactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgg gacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctca gatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgt aatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttgggga ctcttacattgtcataggagtcggggagaagaagatcacccaccactggcataggagtgg cagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtctt gggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaaggg catccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctc acaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctat ttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgc tgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgtt cgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccg tagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgt ttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctgga agagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagagg tccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaa atcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacact gaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggtt cggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtga tccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggcta ctggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagat gaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtga tctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggcta caggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatg cccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatc aaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgccccc actgtcgttctgggctaaagatggctgttggtatggaatggagataaggcccaggaaaga accagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatca cttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaat gaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggagg attttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaat gaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagc gttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggc cttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttct catcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactga caacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgt ggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaa aggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggct ggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctg gccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgc caaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagtta cgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatggga aaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtgg tgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggt cctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggta cgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaagga agtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctagg ttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgt cacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgt caagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggca cagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactct gcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagc aggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaa tggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggagga agagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtctt agacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagc cataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaat ggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcaccca ctctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactaca gccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatcc ctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgc catcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcacc aattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggt gacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagat cgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttga gacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttc agagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagcc ggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccag cgctgcccagaggagggggcgcataggcaggaatcccaataaacctggagatgagtatct gtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaat gctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggc cgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctt tgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgc cggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataat ggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaacc gaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtt tgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccagg acacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcaga gactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccat tatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaa caagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcat gtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctatt gctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggc aatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatg gttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaac cataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgc cttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaacta ctccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgcc attctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaac acccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatccc agggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaa gaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgaccccca agtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatact gtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccac tttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaa catttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgc tggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggc ccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccga ggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgc tgtgtcccgaggaagtgcaaagctgagatggctggtggagcggggatacctgcagcccta tggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccat ccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgt gttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttca tatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcc tgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaa aagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaac cctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaa ctctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtc caccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatga ggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaa catgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggtt ctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccac acaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctggga tgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaag agttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggt tatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagt ctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatt tgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggc tctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaa catgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgc catctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaa cgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattaca aagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcaga tgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaat caccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacata ccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacat tatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatt taccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgca agacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatg ggataggctcaaacgaatggcagtcagtggagatgaytgcgttgtgaagccaattgatga taggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacaca agagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccacca cttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaaga tgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgc ttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacct ccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggag aactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggt gtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaa atggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagg gcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcag gatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttggg cgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgct agtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaa accaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgag cccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaag aaggtggcgaccttccccacccttcaatctggggcctgaactggagat >ZKC2/2016 agttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagccttcttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagatactaatgtcggaattgttggcctcctgctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacttggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcggacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaa cgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggctgataaccgctaaccccgtaatcactgaaagcactgagaactccaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaggagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgtgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcaccaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttccaggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagtaacttagtaaggtcaatggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa ttttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggcttgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggag ctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtgatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacaccatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgccgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtctggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc acgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggag tgatggaagccttgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgc tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctacgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtagccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagctgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccatgttggtgcaaagctatgggtggaacatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tttccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcccaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggacgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagatccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaagacagttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggagta tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggctgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaggccaattgatgataggtttgcacatgccctcaggttcttgaatg atatggggaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaggaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaag caccaatcttagtgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccaccctttaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggtct >VEN/UF_1/2016 agttgttactgttgctgactcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagatgctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagaaactagtgtcggaattgttggcctccttctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagccgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggtttcgctttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgtcgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtttgcaaaagaa cgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgttgtcagttcatggctcccagcacagtgggatgattgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgtggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaagaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcacccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttctgggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa tcttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaagtcagaccagcgttgctggtatccttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggagggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggttggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtg cgctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaataaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc atgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggag tgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgt tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaatatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggtgc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaata tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatg atatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaag caccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggtctt >DOM/2016/BB_0059 tggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagata ctagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagac gtgggagtgcatactacatgtacttggacagaaacgatgctggggaggccatatctttcc caaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtg atgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcg attgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaag gtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgc aaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcg aaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttt tgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccgg catacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtg ggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggaca aaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagat cctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaag gtkaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtgg acagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgcta agtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtacc ggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggac atgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaag ccaccctggggggttttggaagcctaggactggattgtgaaccgaggacaggccttgact tttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggt tccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaaca acaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttc tagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatgg atggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaac ttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcc cggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggac cttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggt tgataaccgccaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaac ttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcaccc accactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtg ccaagagaatggcagtcttgggagatacagcctgggactttggatcagttggaggcgctc tcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttg gaggaatgtcctggttctcacaaatcctcattggaacgttgctgatgtggttgggtctga acacaaagaatggatctatttccctcatgtgcttggccttagggggagtgttgatcttct tatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacga gatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagt accatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggta tctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaagggg agctcaatgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaa aaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacg gctggaaggcttgggggaaatcgtacttcgttagagcagcaaagacaaataacagctttg tcgtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggaacagctgttaagggaaaggaggctg tacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaaga gggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacag atggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatc acaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttg aaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaa gaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgca gggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatgg agataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtgactgcaggat caactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcagg aagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctgg tagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgg gtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcgg cattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacacccc gtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttgg aaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcga tggttgttccacgcactgataacatcaccttggcaatcctggctgctctgacaccactgg cccggggtacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgc tcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgg gactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaa ggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcg cattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcg gtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagag caggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatg tggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagag agatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccct ttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatggg atgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaa tgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtct ttcacactatgtggcatgtcacaaaaggatccgcgctgagaagcggtgaagggagacttg atccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctag atgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagag cgaggaacatccagactctgcccggaatatttaagacaaaggannnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcgagccttcgatgctgaaga agaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttc ctgaaatagtccgtgaagctataaaaacaagactccgtactgtgatcttagctccaacca gggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaa cagcagtcaatgtcacccattctggaacagaaatcgtcgacttaatgtgccatgccacct tcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatg aggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttg agatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcat ttccggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgggtcatacagc tcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttg tcgtgacaaccgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagatt ccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggaccca tgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaaca aacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcac actggcttgarkcaagaatgctccttgacaatatttgcctccaagatggcctcatagcct cgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttagga cggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctgg cctatcaggttgcatctgccggaataacttacacagatagaagatggtgctttgatggca cgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggag agaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccc tgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaag ccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcg ctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgc cggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatct ttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttg gggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcc tcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctc cccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgatca ccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaa ggagagaggagggagcaaccataggattctcaatggacattgacctgcggccagcctcag cttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtga ccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttg gtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgatag gttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgc actacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaa crgcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgaca caatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtag ccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctga tcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctcta cagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatct acacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccc tgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctaca aaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtg tggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagc ggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctgga gttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggcc ctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtctcaaga gtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacatag gtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatgg tgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccataca ccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtca gagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagca acaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggccta ggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaa gctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtg agcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatg gaagctatgaggcccccacacaagggtcagcatcctctctagtaaacggggttgtcaggc tcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacacca caccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagaccccc aagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggca aacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatg cagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtga acgatccaaggttctgggctctagtggacaasgaaagagagcaccacctgagaggagagt gccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaa aggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcg aagcccttggattcttgaacgaggatcactggwtggggagagagaactcaggaggtggtg ttgaagggctgggattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagggcacagggccttggcattgg ccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaag ggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtca cttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctg aggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaact ggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcg ttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaa aagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaag ttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtgg ttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggat ggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctccttt atttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttg actgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgacca ttgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaag acaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgt ggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaaca cagtcaacatggtgcgcaggatcataggtgaggaagaaaagtacatggactacctatcca cccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatct taatgttgtcaggcc >BRA/2016/FC_6706 agtttgaagcgaaagctagcaacagtatcaacaggttttatttyggatttggaaacgaga gtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgct aaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggact tctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcac ggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggc tatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgc taggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgct gaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttgga cagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgtta tatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctat gctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttg ggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgt gacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatc aagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggctt cgcgttagcagcagccgccatcgcttggcttttgggaagctcaacgagccaaaaagtcat atacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcag caatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaaca tggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttac aacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcaga catggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcaga cactcaatatgtctgyaaaagaacgttagtggacagaggctggggaaatggatgtggact ttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgg gaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctccca gcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggt tgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctagg acttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaa taacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgc tggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaagga cgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacac ggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctgg ccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactcctt gtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcac agtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggt ggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactga aagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacat tgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccat tggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacac agcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatca aatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattct cattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttat gtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggg gtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctataa cgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggc agcagcagtcaagcaagcctgggaagatggtatctgcgggatctcttctgtttcaagaat ggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatgg agttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagag attgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtactt cgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatg cccactcaaacatagagcatggaacagctttctwgtggaggatcatgggttcggggtatt tcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgt tattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattga gagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatg tgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcat acccaagtctttagctgggccactcagccatcacaataccagagagggctacaggaccca aatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcac taaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgc aagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgtt ccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaag caacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccct tggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaa gatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaat gagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgg aggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggt atctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctc gtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatgg ttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcac cttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggag agcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgt gaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccc catcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctag cgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcaga tatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctc gggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgc ggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctc cctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgac catctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgt gaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaa gggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacaca agttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaagg atccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcagga tctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggt gcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaat atttaagacaaaggatggggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnagccttcgatgctgaagaagaagcagctaactgtcttagacttgca tcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaac aagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagc ccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaac agaaatcgtcgacttaatgtgcyatgccaccttcacttcacgtctactacagccaatcag agtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtat agcagcaagaggatacatttcaacaagggttgagatgggcgaggcrgctgccatcttcat gaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatgga caccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatca ttctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttg tctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagtt ccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatggg cgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatact tgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgccca gaggagggggcgcataggcaggaatcctaacaaacctggagatgagtatctgtatggagg tgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttga caatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagt agcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaact catgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataac ctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacag tgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggat ggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgg gaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgac agagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaag caggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgctctt ggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcat agggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctc ggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggt gctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcat catggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagag aacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggatt ctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaac tttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaat ggcgatggccacgcaggctggagtgttgtttggtatgggcaaagggatgccattctacgc atgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgac cctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgca ggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgt tgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaa aaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggac cgcctgggggtggggggaggctggggctctgatcacagccgcaacctccactttgtggga aggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttag gggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggt caagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaa ccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcag agaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccg aggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggt cattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagt tcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgca aagctatgggtggaacatagtccgtcttaagagtggggtagacgtctttcatatggcggc tgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtgga agaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagg agccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcg actgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacaca tgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgag ccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgt gaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagat cattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacga gaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtc agcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgac tggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaa ggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcat ggtctcttcctggttgtggaaagagctaggcaaacacaagcggccacgagtctgtaccaa agaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagagga aaaagrktggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtgga caaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggg aaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagtcgcgccatctggta tatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatca ctggatggggagagagaactcaggaggtggtgttgaagnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnacagggccttggcattggccataatcaagtacacataccaaaacaa agtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgag acaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacct agtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtg gctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggct caaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgc acatgccctcaggttcttgaatgatatgggaaaagtcaggaaggacacacaagagtggaa accctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaa gctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgat tggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagc aaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgat ggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctg gtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacag agtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacaga cattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagacc gcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcatagg tgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagg gtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggc >DOM/2016/BB_0183 gtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagag tttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgcta aaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggactt ctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacg gcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggct atggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgct aggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctg accacagctatggcagcggaggtcactagacgtgggagtgcatactacatgtacttggac agaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttat atacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatg ctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgg gttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtg acgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatca agagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttc gcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcata tacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagc aatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacat ggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttaca acaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagac atggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagac actcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactt tttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccggg aagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccag cacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggtt gagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctagga cttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaat aacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgct ggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggac gcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacg gcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggc cacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttg tgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcaca gtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtg gacatgcaaactctgaccccagttgggaggttgataaccgccaaccccgtaatcactgaa agcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacatt gtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccatt ggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacaca gcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaa atttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaatcctc attggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctcatg tgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgggg tgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataac gacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggca gcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatg gaaaacatcatgtggagatcagtagaaggggagctcaatgcaatcctggaagagaatgga gtccaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagaga ttgcccgtgcctgtgaacgagctgccccacggctggaaggcctgggggaaatcgtacttc gttagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgc ccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtattt cacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgtt attggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgag agtgagaagaatggcacatggaggctgaagagggcccatctgatcgagatgaaaacatgt gaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcata cccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaa atgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcact aaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgca agcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttc cgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagc aacttagtaaggtcagtggtgactgcaggatcaactgatcacatggatcacttctccctt ggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaag atcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatg agtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgga ggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggta tctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcg tgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggt tttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcacc atggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggaga gcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtg aagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacccc atcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagc gaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagat atagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctca ggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcg gaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctcc ctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgacc atctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtg aagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaag ggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaa gttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaagga tccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggat ctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtg cagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaata tttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttca ggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtg atcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcct gttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcat cctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagctataaaaaca agactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcc cttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccattctggaaca gaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcaga gtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtata gcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatg accgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggac accgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcat tctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgt ctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttc cagaaaacaaaacatcaagagtgggactttgtcgtgacaaccgacatttcagagatgggc gccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatactt gatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccag aggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggt gggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgac aatatttacctccaagatggccttatagcctcgctctatcgacctgaggccgacaaagta gcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactc atgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataact tacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagt gtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatg gacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctggg aaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgaca gagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagc aggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttg gggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcata gggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcg gaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtg ctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatc atggtagcagtaggtcttctgggcttgatcaccgccaatgaactcggatggttggagaga acaaagagtgacctaagccatctaatgggaaggagagaggagggagcaaccataggattc tcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaact ttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatg gcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgca tgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgacc ctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcag gcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgtt gtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaa aagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggacc gcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaa ggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttagg ggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtc aagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaac cagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcaga gaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccga ggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtc attgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagtt caagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaa agctatgggtggaacatagtccgtctcaagagtggggtggacgtctttcatatggcggct gagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaa gaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagga gccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcga ctgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacat gagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagc cagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtg aatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatc attggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgag aaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtca gcatcctctctagtaaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgact ggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaag gaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatg gtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaa gaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaa aaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggac aaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggga aaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtat atgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcac tggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcgga tatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgct ggctgggatacccgcatcagcaggtttgatctagagaatgaagctctaatcaccaaccaa atggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaa gtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgaga caagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaaccta gtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtgg ctgctgcggaggtcagagaaagtgaccaactggttgcggagcaacggatgggataggctc aaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgca catgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaa ccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaag ctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgatt ggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagca aaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatg gccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctgg tcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacaga gtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagac attccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccg cgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggt gaggaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaaggg tctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccac agcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagccta tagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagag gacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcga ccttccccacccttcaatctggggcctgaactggagatcagctgtggatccccagaagag g >EcEs062_16 agtagttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaa cgttagtggacagaggctggggaaatggatgcggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagactgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatccatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaagaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa ttttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaggtcagaccagcgttgctggtatctttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtg ctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagctgttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgctatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacaactcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc atgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagccgcttttggag tgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgc tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtgggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggagcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaacactggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatacaggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagtttatcaacaaggttc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaaaacggttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaata tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatg atatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgctcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaatagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacgcctggagtgctgtaag caccaatcctaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggagatcgga >SG_018 atgnnnnnnnnnnnnnnnnnnnccggaggattccggattgtcaatatgctaaaacgcgga gtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggt catgggcccatcaggatggtcttggcgattctagcctttttgaggttcacggcaatcaag ccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaata ataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggag aagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctgaccacagct atggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaagcgat gctggggaggccatatcttttccaaccacactggggatgaataagtgttatatacagatc atggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgag ggggtagaaccagatgacgtcgattgttggtgcaacacgacgtcagcttgggttgtgtac gtaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccc tcccattccactaggaagctgcaaacgcggtcgcagacctggttggagtcaagagaatac acaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttcgcgttagca gcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtc atgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggac tttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgt gtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtc agcaacatggcggaggtaagatcctactgctatgaggcatcaatatcggacatggcttcg gacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagatacccaatat gtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggaaaa gggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatc cagccagagaatctggagtaccggataatgctgtcagtccatggctcccagcacagtggg atgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacg cccaattcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgt gaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcac tggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagac accggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgcc aaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgct ggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaa tgtcgcctgaaaatggacaaacttagattgaagggcgtgtcatactccttgtgtaccgca gcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggta cagtacgcagggacagatggaccctgcaaggttccagctcagatggcggtggacatgcaa actctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgag aactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcatagga gtcggggagaagaagatcacccaccactggcacaggagtggcagtaccattggaaaagca tttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggac tttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttgga gcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacg ttgctgatgtggttgggcctgaacacaaagaatggatctatttcccttatgtgcttggcc ttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtg gacttctcaaagaaggaaacgagatgcggtacaggggtgttcgtctataacgacgttgaa gcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtc aagcaagcctgggaagatggtatctgtgggatctcctctgtttcaagaatggaaaacatc atgtggagatcagtagaaggggagctcaacgcaatcctggaagaaaatggagttcaactg acggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagactgcccgtg cctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagca gcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaa catagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagt gtctggctcaaggttagagaagattattcattagagtgtgatcctgccgttattggaaca gctgttaagggaaaggaggctgcacacagtgatctaggctactggattgagagtgagaag aatgacacatggaggctgaagagggcccacctgatcgagatgaaaacatgtgaatggcca aagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtct ttagctgggccactcagccatcacaacaccagagagggctacaggacccaaatgaaaggg ccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccac gtggaggaaacatgtggaacaagaggaccgtctctgagatcaaccactgcaagcggaagg gtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaa gatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagtaacttagta aggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgctt gtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcata agcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctg gctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgta gctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatctttcatc ttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttg caaactgcgatttccgccttggaaggcgacctgatggttctcatcaatggttttgctctg gcctggttggcaatacgagcgatggttgttccacgcactgacaacatcaccttggcaatc ctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggcctt gctacttgcggggggttcatgctcctctctctgaagggaaaaggcagtgtgaagaagaac ttaccatttgtcatggccctgggactaaccgctgtgaggctagtcgaccccatcaacgtg gtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactc acagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatg gctgggcccatggccgcggttggtctgctaattgtcagttacgtggtctcaggaaagagt gtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcact ggaaacagtccccggctcgatgtggcactagatgagagtggtgatttctccctggtggag gatgacggtccccccatgagagagatcatactcaaagtggtcctgatgaccatctgtggc atgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactgga aaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagacc acagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtg ggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcactg agaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtca tactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttg gccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagaca aaggatggggacattggagcggttgcgctggactacccagcaggaacttcaggatctcca atcctagacaagtgtgggagagtgataggactctatggcaatggggtcgtgatcaaaaat gggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgc ttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagct gggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgt actgtgatcttagctccaactagggttgtcgctgctgaaatggaggaagcccttagaggg cttccagtgcgttatatgacaacagcagtcaatgtcacccactctgggacagaaatcgtt gacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaac tataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaaga ggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacg ccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtg gaagtcccggagagagcctggagctcaggctttgattgggtgacggaccattctggaaaa acagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacgaag gctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaaca aaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaacttt aaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgag agagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggaggggg cgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggtgggtgcgca gagactgatgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatctac ctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccatt gagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaaga ggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagat agaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggca gaggtgtggaccagatacggagagaaaagagtgctcaaaccgaggtggatggacgccaga gtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagagga gcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattc caggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcagaccttac aaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctg ggaacagtctcgctgggaatctttttcgtcttgatgcggaacaagggcatagggaagatg ggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgag ccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacct gagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagca gtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagt gacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggac attgacctgcggccagcctcagcttgggccatctatgctgccctgacaactttcattacc ccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggcc acgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggacttt ggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtg gccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagct gcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatgga atagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatggga caggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctggggg tggggggaggctggggccctgatcacagctgcaacttccactttgtgggaaggctctccg aacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttac ttggctggagcttctctaatctacacagtaacaagaaacgctggtttggtcaagagacgt gggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcg gccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcc cgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccggggaagtgca aagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatctt ggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtg aaaggatacacaaaaggaggccctggtcatgaagaacccatgttggtgcaaagctatggg tggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgt gacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacgg acgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgt ataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgt aggtatgggggaggactggtcagagtgccactctcccgcaactcaacacatgagatgtac tgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctc ttggggcgcatggacgggcccaggaggccagtgaaatatgaggaggatgtgaatctcggc tctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaac cgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccaccca tataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctct ctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcaca ggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtg gacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcc tggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttc atcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtgg aagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaaga gagcaccacctgagaggagagtgccagagctgtgtgtacaacatgatgggaaaaagagaa aagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggcta ggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatgggg agagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtccta gaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggac acccgcatcagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaa gggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaag gtccttagaccagctgaaaaagggaagacagtgatggacattatttcaagacaagaccaa agggggagcggacaagttgtcacttacgctctcaacacatttaccaacctagtggtgcaa ctcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcgg aggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatg gcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctc aggttcttgaatgatatggggaaagttaggaaggacacacaagaatggaaaccctcaact ggatgggacaactgggaagaagttccgttttgctcccaccatttcaacaagctccatctc aaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcc cgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatat gcgcagatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgcc atttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccat ggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggatt gaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctat ttgggaaaaagggaagacttatggtgtggatctctcatagggcacagaccgcgcaccacc tgggctgagaacattaaaaacacagtcaacatggtgcgcagaatcataggtgatgaagaa aagtacatggactacctatccacccaagttcgctacttgggtgaggaagggtctacacct ggagtgctgtaagcaccaatcttagtgttgtcaggcctgctagtcagccacagcttgggg aaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcccatagtcaggc cgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgag tcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttcccca cccttcaatctggggcctgaactggagatcagctgtggatctccagaagagggactagtg gttagaggagaccccccggaaaacgcaaaacagcatattgacgctgggaaagaccagaga ctccatgagtttccaccacgctggccgccaggcacagat augur-24.2.2/tests/functional/mask.t000066400000000000000000000056701456376326500174010ustar00rootroot00000000000000Integration tests for augur mask. $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../bin/augur}" Try masking a VCF without any specified mask. $ ${AUGUR} mask --sequences mask/variants.vcf.gz No masking sites provided. Must include one of --mask, --mask-from-beginning, --mask-from-end, --mask-invalid, or --mask-sites [1] Mask a VCF with a BED file and no specified output file. $ cp "mask/variants.vcf.gz" "$TMP/" $ ${AUGUR} mask \ > --sequences "$TMP/variants.vcf.gz" \ > --mask "mask/mask_variants.bed" > /dev/null $ diff -u "mask/masked_variants.vcf" <(gzip -c -d "$TMP/variants.vcf.gz") $ rm -f "$TMP/variants.vcf.gz" Mask a VCF with a BED file and a specified output file. $ ${AUGUR} mask \ > --sequences "mask/variants.vcf.gz" \ > --mask "mask/mask_variants.bed" \ > --output "$TMP/masked_variants.vcf" > /dev/null $ diff -u "mask/masked_variants.vcf" "$TMP/masked_variants.vcf" $ rm -f "$TMP/masked_variants.vcf" Try masking sequences without any specified mask. $ ${AUGUR} mask --sequences mask/sequences.fasta No masking sites provided. Must include one of --mask, --mask-from-beginning, --mask-from-end, --mask-invalid, or --mask-sites [1] Mask sequences with a BED file and no specified output file. Since no output is provided, the input file is overridden with the masked sequences. $ cp mask/sequences.fasta "$TMP/" $ ${AUGUR} mask --sequences "$TMP/sequences.fasta" --mask mask/mask.bed 3 masking sites read from mask/mask.bed Removing masked sites from FASTA file. $ cat "$TMP/sequences.fasta" >sequence_1 NNGCNG $ rm -f "$TMP/sequences.fasta" Mask sequences with a BED file and a specified output file. $ ${AUGUR} mask \ > --sequences mask/sequences.fasta \ > --mask mask/mask.bed \ > --output "$TMP/masked.fasta" 3 masking sites read from mask/mask.bed Removing masked sites from FASTA file. $ cat "$TMP/masked.fasta" >sequence_1 NNGCNG $ rm -f "$TMP/masked.fasta" Mask one base from the beginning and the end. $ ${AUGUR} mask \ > --sequences mask/sequences.fasta \ > --mask-from-beginning 1 \ > --mask-from-end 1 \ > --output "$TMP/masked.fasta" Removing masked sites from FASTA file. $ cat "$TMP/masked.fasta" >sequence_1 NTGCTN $ rm -f "$TMP/masked.fasta" Mask a specific list of sites and also mask one base from the beginning and the end. $ ${AUGUR} mask \ > --sequences mask/sequences.fasta \ > --mask-sites 3 4 \ > --mask-from-beginning 1 \ > --mask-from-end 1 \ > --output "$TMP/masked.fasta" Removing masked sites from FASTA file. $ cat "$TMP/masked.fasta" >sequence_1 NTNNTN $ rm -f "$TMP/masked.fasta" Mask invalid nucleotides $ ${AUGUR} mask \ > --sequences mask/invalidnucleotide.fasta \ > --mask-invalid \ > --output "$TMP/masked.fasta" Removing masked sites from FASTA file. $ cat "$TMP/masked.fasta" >sequence_1 ATCGNNNN $ rm -f "$TMP/masked.fasta" $ popd > /dev/null augur-24.2.2/tests/functional/mask/000077500000000000000000000000001456376326500172045ustar00rootroot00000000000000augur-24.2.2/tests/functional/mask/invalidnucleotide.fasta000066400000000000000000000000251456376326500237230ustar00rootroot00000000000000>sequence_1 ATCG1234 augur-24.2.2/tests/functional/mask/mask.bed000066400000000000000000000000201456376326500206030ustar00rootroot00000000000000SEQ 0 2 SEQ 4 5 augur-24.2.2/tests/functional/mask/mask_variants.bed000066400000000000000000000000441456376326500225200ustar00rootroot00000000000000MTB_anc 1198 1200 MTB_anc 8320 8323 augur-24.2.2/tests/functional/mask/masked_variants.vcf000066400000000000000000000003531456376326500230600ustar00rootroot00000000000000#CHROM POS ID REF ALT QUAL FILTER INFO MTB_anc 1463 . G C . PASS . MTB_anc 2018 . C T . PASS . MTB_anc 2532 . C T . PASS . MTB_anc 3132 . A C . PASS . MTB_anc 4663 . G C . PASS . MTB_anc 5887 . C T . PASS . MTB_anc 7581 . G T . PASS . augur-24.2.2/tests/functional/mask/sequences.fasta000066400000000000000000000000231456376326500222120ustar00rootroot00000000000000>sequence_1 ATGCTG augur-24.2.2/tests/functional/mask/variants.vcf.gz000066400000000000000000000002331456376326500221500ustar00rootroot00000000000000KP_variants.vcfuͱ z @HH".H\qovwo.1,XC;!n6:'&t8CD1oTPŤ-uC{O*5:GXUL ٣_{#augur-24.2.2/tests/functional/measurements_concat.t000066400000000000000000000043411456376326500224770ustar00rootroot00000000000000Integration tests for augur measurements export. $ pushd "$TESTDIR" > /dev/null $ export AUGUR="../../bin/augur" Measurements concat for two measurements JSONs, each with a single collection. $ ${AUGUR} measurements concat \ > --jsons measurements_concat/single_collection_measurements_1.json measurements_concat/single_collection_measurements_2.json \ > --default-collection collection_1 \ > --output-json "$TMP/two_collections_measurements.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" measurements_concat/two_collections_measurements.json "$TMP/two_collections_measurements.json" {} Measurements concat for two measurements JSONs, where one has multiple collections. $ ${AUGUR} measurements concat \ > --jsons measurements_concat/two_collections_measurements.json measurements_concat/single_collection_measurements_3.json \ > --default-collection collection_1 \ > --output-json "$TMP/multiple_collections_measurements.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" measurements_concat/multiple_collections_measurements.json "$TMP/multiple_collections_measurements.json" {} Measurements concat for measurements JSONs that have collections that share the same key. This is expected to fail. $ ${AUGUR} measurements concat \ > --jsons measurements_concat/single_collection_measurements_1.json measurements_concat/single_collection_measurements_1.json \ > --default-collection collection_1 \ > --output-json "$TMP/multiple_collections_measurements.json" 1>/dev/null ERROR: Collections at indexes [0, 1] share the same collection key 'collection_1'. ERROR: Validation of output JSON failed. See detailed errors above. [1] Measurements concat with an invalid default collection. This is expected to fail. $ ${AUGUR} measurements concat \ > --jsons measurements_concat/single_collection_measurements_1.json measurements_concat/single_collection_measurements_2.json \ > --default-collection collection_3 \ > --output-json "$TMP/multiple_collections_measurements.json" 1>/dev/null ERROR: The default collection key 'collection_3' does not match any of the collections' keys. ERROR: Validation of output JSON failed. See detailed errors above. [1] augur-24.2.2/tests/functional/measurements_concat/000077500000000000000000000000001456376326500223105ustar00rootroot00000000000000augur-24.2.2/tests/functional/measurements_concat/multiple_collections_measurements.json000066400000000000000000000042231456376326500322250ustar00rootroot00000000000000{ "collections": [ { "groupings": [ { "key": "field_1" } ], "key": "collection_1", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "x_axis_label": "measurement values" }, { "groupings": [ { "key": "field_1" } ], "key": "collection_2", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "x_axis_label": "measurement values" }, { "groupings": [ { "key": "field_1" } ], "key": "collection_3", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "x_axis_label": "measurement values" } ], "default_collection": "collection_1" }augur-24.2.2/tests/functional/measurements_concat/single_collection_measurements_1.json000066400000000000000000000013401456376326500317050ustar00rootroot00000000000000{ "collections": [ { "groupings": [ { "key": "field_1" } ], "key": "collection_1", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "x_axis_label": "measurement values" } ] } augur-24.2.2/tests/functional/measurements_concat/single_collection_measurements_2.json000066400000000000000000000013401456376326500317060ustar00rootroot00000000000000{ "collections": [ { "groupings": [ { "key": "field_1" } ], "key": "collection_2", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "x_axis_label": "measurement values" } ] } augur-24.2.2/tests/functional/measurements_concat/single_collection_measurements_3.json000066400000000000000000000013401456376326500317070ustar00rootroot00000000000000{ "collections": [ { "groupings": [ { "key": "field_1" } ], "key": "collection_3", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "x_axis_label": "measurement values" } ] } augur-24.2.2/tests/functional/measurements_concat/two_collections_measurements.json000066400000000000000000000027151456376326500312070ustar00rootroot00000000000000{ "collections": [ { "groupings": [ { "key": "field_1" } ], "key": "collection_1", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "x_axis_label": "measurement values" }, { "groupings": [ { "key": "field_1" } ], "key": "collection_2", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "x_axis_label": "measurement values" } ], "default_collection": "collection_1" }augur-24.2.2/tests/functional/measurements_export.t000066400000000000000000000147531456376326500225610ustar00rootroot00000000000000Integration tests for augur measurements export. $ pushd "$TESTDIR" > /dev/null $ export AUGUR="../../bin/augur" Minimal measurements export with existing strain and value columns. $ ${AUGUR} measurements export \ > --collection measurements_export/collection.tsv \ > --grouping-column field_1 \ > --output-json "$TMP/minimal_measurements.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" measurements_export/minimal_measurements.json "$TMP/minimal_measurements.json" {} Minimal measurements export with user provided strain and value columns. $ ${AUGUR} measurements export \ > --collection measurements_export/collection_without_strain_value_columns.tsv \ > --strain-column strain_field \ > --value-column value_field \ > --grouping-column field_1 \ > --output-json "$TMP/minimal_measurements.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" measurements_export/minimal_measurements.json "$TMP/minimal_measurements.json" \ > --exclude-paths "root['collections'][0]['key']" {} Try measurements export with user provided strain and value columns that would overwrite existing columns. This is expected to fail. $ ${AUGUR} measurements export \ > --collection measurements_export/collection.tsv \ > --strain-column field_1 \ > --value-column field_2 \ > --grouping-column field_1 \ > --output-json "$TMP/minimal_measurements.json" ERROR: Cannot use provided 'field_1' column as the strain column because a 'strain' column already exists in collection TSV. ERROR: Cannot use provided 'field_2' column as the value column because a 'value' column already exists in collection TSV. [1] Try measurements export with user provided strain and value columns that are the same column. This is expected to fail. $ ${AUGUR} measurements export \ > --collection measurements_export/collection_without_strain_value_columns.tsv \ > --strain-column field_1 \ > --value-column field_1 \ > --grouping-column field_1 \ > --output-json "$TMP/minimal_measurements.json" ERROR: The strain column and value column cannot be the same column. [1] Minimal measurements export with user provided strain, value, and subset of columns. $ ${AUGUR} measurements export \ > --collection measurements_export/collection_without_strain_value_columns.tsv \ > --strain-column strain_field \ > --value-column value_field \ > --grouping-column field_1 \ > --include-columns field_1 field_3 \ > --output-json "$TMP/minimal_measurements_subset.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" measurements_export/minimal_measurements_subset.json "$TMP/minimal_measurements_subset.json" {} Try measurements export with grouping column missing from include columns list This is expected to fail. $ ${AUGUR} measurements export \ > --collection measurements_export/collection_without_strain_value_columns.tsv \ > --strain-column strain_field \ > --value-column value_field \ > --grouping-column field_1 \ > --include-columns field_3 \ > --output-json "$TMP/minimal_measurements_subset.json" 1>/dev/null ERROR: Provided grouping column 'field_1' was not in the list of columns to include: ['field_3']. [1] Try measurements export with invalid grouping columns. This is expected to fail. $ ${AUGUR} measurements export \ > --collection measurements_export/collection.tsv \ > --grouping-column bad_field \ > --output-json "$TMP/minimal_measurements.json" ERROR: Provided grouping column 'bad_field' does not exist in collection TSV. [1] Measurements export for a single collection using only command line configs. $ ${AUGUR} measurements export \ > --collection measurements_export/collection.tsv \ > --grouping-column field_1 field_2 \ > --key args-collection \ > --title collection-display-title \ > --x-axis-label label \ > --threshold 2.0 \ > --filters field_1 field_2 \ > --group-by field_1 \ > --measurements-display mean \ > --show-overall-mean \ > --show-threshold \ > --output-json "$TMP/single_collection_with_args_measurements.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" measurements_export/single_collection_with_args_measurements.json "$TMP/single_collection_with_args_measurements.json" {} Measurements export for a single collection using a collection config. $ ${AUGUR} measurements export \ > --collection measurements_export/collection.tsv \ > --collection-config measurements_export/collection_config.json \ > --output-json "$TMP/single_collection_with_config_measurements.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" measurements_export/single_collection_with_config_measurements.json "$TMP/single_collection_with_config_measurements.json" {} Measurements export for a single collection using a collection config and command-line overrides. $ ${AUGUR} measurements export \ > --collection measurements_export/collection.tsv \ > --collection-config measurements_export/collection_config.json \ > --grouping-column field_3 \ > --key override-collection \ > --title override-collection-display-title \ > --x-axis-label override-label \ > --threshold 10.0 \ > --filters field_3 \ > --group-by field_3 \ > --measurements-display raw \ > --hide-overall-mean \ > --hide-threshold \ > --output-json "$TMP/single_collection_with_overrides_measurements.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" measurements_export/single_collection_with_overrides_measurements.json "$TMP/single_collection_with_overrides_measurements.json" {} Measurements export for a single collection using a collection config and command-line overrides with multiple thresholds. $ ${AUGUR} measurements export \ > --collection measurements_export/collection.tsv \ > --collection-config measurements_export/collection_config.json \ > --grouping-column field_3 \ > --key override-collection \ > --title override-collection-display-title \ > --x-axis-label override-label \ > --thresholds 2.0 0.0 \ > --filters field_3 \ > --group-by field_3 \ > --measurements-display raw \ > --hide-overall-mean \ > --hide-threshold \ > --output-json "$TMP/single_collection_with_multiple_thresholds.json" &>/dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" measurements_export/single_collection_with_multiple_thresholds.json "$TMP/single_collection_with_multiple_thresholds.json" {} augur-24.2.2/tests/functional/measurements_export/000077500000000000000000000000001456376326500223625ustar00rootroot00000000000000augur-24.2.2/tests/functional/measurements_export/collection.tsv000066400000000000000000000002241456376326500252510ustar00rootroot00000000000000strain value field_1 field_2 field_3 strain_1 1.0 value_1 value_1 value_1 strain_2 2.0 value_2 value_2 value_2 strain_3 3.0 value_3 value_3 value_3 augur-24.2.2/tests/functional/measurements_export/collection_config.json000066400000000000000000000017551456376326500267450ustar00rootroot00000000000000{ "key": "config-collection", "title": "collection-display-title", "fields": [ { "key": "field_1", "title": "field_title_1" }, { "key": "field_2", "title": "field_title_2" }, { "key": "field_3", "title": "field_title_3" } ], "groupings": [ { "key": "field_1", "order": [ "value_3", "value_1", "value_2" ] }, { "key": "field_2", "order": [ "value_2", "value_3", "value_1" ] } ], "filters": [ "field_1", "field_2" ], "x_axis_label": "label", "threshold": 2.0, "display_defaults": { "group_by": "field_1", "measurements_display": "mean", "show_overall_mean": true, "show_threshold": true } } augur-24.2.2/tests/functional/measurements_export/collection_without_strain_value_columns.tsv000066400000000000000000000002401456376326500333460ustar00rootroot00000000000000strain_field value_field field_1 field_2 field_3 strain_1 1.0 value_1 value_1 value_1 strain_2 2.0 value_2 value_2 value_2 strain_3 3.0 value_3 value_3 value_3 augur-24.2.2/tests/functional/measurements_export/minimal_measurements.json000066400000000000000000000014001456376326500274660ustar00rootroot00000000000000{ "collections": [ { "groupings": [ { "key": "field_1" } ], "key": "collection.tsv", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "title": "Measurements", "x_axis_label": "measurement values" } ] }augur-24.2.2/tests/functional/measurements_export/minimal_measurements_subset.json000066400000000000000000000012751456376326500310650ustar00rootroot00000000000000{ "collections": [ { "groupings": [ { "key": "field_1" } ], "key": "collection_without_strain_value_columns.tsv", "measurements": [ { "field_1": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "title": "Measurements", "x_axis_label": "measurement values" } ] }augur-24.2.2/tests/functional/measurements_export/single_collection_with_args_measurements.json000066400000000000000000000020731456376326500336120ustar00rootroot00000000000000{ "collections": [ { "display_defaults": { "group_by": "field_1", "measurements_display": "mean", "show_overall_mean": true, "show_threshold": true }, "filters": [ "field_1", "field_2" ], "groupings": [ { "key": "field_1" }, { "key": "field_2" } ], "key": "args-collection", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "thresholds": [2.0], "title": "collection-display-title", "x_axis_label": "label" } ] } augur-24.2.2/tests/functional/measurements_export/single_collection_with_config_measurements.json000066400000000000000000000030371456376326500341240ustar00rootroot00000000000000{ "collections": [ { "display_defaults": { "group_by": "field_1", "measurements_display": "mean", "show_overall_mean": true, "show_threshold": true }, "fields": [ { "key": "field_1", "title": "field_title_1" }, { "key": "field_2", "title": "field_title_2" }, { "key": "field_3", "title": "field_title_3" } ], "filters": [ "field_1", "field_2" ], "groupings": [ { "key": "field_1", "order": [ "value_3", "value_1", "value_2" ] }, { "key": "field_2", "order": [ "value_2", "value_3", "value_1" ] } ], "key": "config-collection", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "thresholds": [2.0], "title": "collection-display-title", "x_axis_label": "label" } ] } augur-24.2.2/tests/functional/measurements_export/single_collection_with_multiple_thresholds.json000066400000000000000000000024521456376326500341610ustar00rootroot00000000000000{ "collections": [ { "display_defaults": { "group_by": "field_3", "measurements_display": "raw", "show_overall_mean": false, "show_threshold": false }, "fields": [ { "key": "field_1", "title": "field_title_1" }, { "key": "field_2", "title": "field_title_2" }, { "key": "field_3", "title": "field_title_3" } ], "filters": [ "field_3" ], "groupings": [ { "key": "field_3" } ], "key": "override-collection", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "thresholds": [2.0, 0.0], "title": "override-collection-display-title", "x_axis_label": "override-label" } ] } augur-24.2.2/tests/functional/measurements_export/single_collection_with_overrides_measurements.json000066400000000000000000000024461456376326500346640ustar00rootroot00000000000000{ "collections": [ { "display_defaults": { "group_by": "field_3", "measurements_display": "raw", "show_overall_mean": false, "show_threshold": false }, "fields": [ { "key": "field_1", "title": "field_title_1" }, { "key": "field_2", "title": "field_title_2" }, { "key": "field_3", "title": "field_title_3" } ], "filters": [ "field_3" ], "groupings": [ { "key": "field_3" } ], "key": "override-collection", "measurements": [ { "field_1": "value_1", "field_2": "value_1", "field_3": "value_1", "strain": "strain_1", "value": 1.0 }, { "field_1": "value_2", "field_2": "value_2", "field_3": "value_2", "strain": "strain_2", "value": 2.0 }, { "field_1": "value_3", "field_2": "value_3", "field_3": "value_3", "strain": "strain_3", "value": 3.0 } ], "thresholds": [10.0], "title": "override-collection-display-title", "x_axis_label": "override-label" } ] } augur-24.2.2/tests/functional/parse.t000066400000000000000000000142571456376326500175610ustar00rootroot00000000000000Integration tests for augur parse. $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../bin/augur}" Try to parse Zika sequences without specifying fields. This should fail. $ ${AUGUR} parse \ > --sequences parse/zika.fasta \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" usage: .* (re) .* (re) .* (re) .* (re) .* (re) .* (re) augur parse: error: the following arguments are required: --fields [2] Parse Zika sequences into sequences and metadata. $ ${AUGUR} parse \ > --sequences parse/zika.fasta \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" \ > --fields strain virus accession date region country division city db segment authors url title journal paper_url \ > --prettify-fields region country division city \ > --fix-dates monthfirst $ diff -u "parse/sequences.fasta" "$TMP/sequences.fasta" $ diff -u "parse/metadata.tsv" "$TMP/metadata.tsv" $ rm -f "$TMP/sequences.fasta" "$TMP/metadata.tsv" Parse Zika sequences into sequences and metadata using a different metadata field as record id (e.g. accession) $ ${AUGUR} parse \ > --sequences parse/zika.fasta \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" \ > --output-id-field accession \ > --fields strain virus accession date region country division city db segment authors url title journal paper_url \ > --prettify-fields region country division city \ > --fix-dates monthfirst $ diff -u "parse/sequences_other.fasta" "$TMP/sequences.fasta" $ diff -u "parse/metadata.tsv" "$TMP/metadata.tsv" $ rm -f "$TMP/sequences.fasta" "$TMP/metadata.tsv" Try to parse Zika sequences with a misspelled field. This should fail. $ ${AUGUR} parse \ > --sequences parse/zika.fasta \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" \ > --output-id-field notexist \ > --fields strain virus accession date region country division city db segment authors url title journal paper_url \ > --prettify-fields region country division city \ > --fix-dates monthfirst ERROR: Output id field 'notexist' not found in fields ['strain', 'virus', 'accession', 'date', 'region', 'country', 'division', 'city', 'db', 'segment', 'authors', 'url', 'title', 'journal', 'paper_url']. [2] Parse Zika sequences into sequences and metadata, preferred default ids is 'name', then 'strain', then first field. $ ${AUGUR} parse \ > --sequences parse/zika.fasta \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" \ > --fields strain virus name date region country division city db segment authors url title journal paper_url \ > --prettify-fields region country division city \ > --fix-dates monthfirst DEPRECATED: The default search order for the ID field will be changing from ('name', 'strain') to ('strain', 'name'). Users who prefer to keep using 'name' instead of 'strain' should use the parameter: --output-id-field 'name' $ diff -u "parse/sequences_other.fasta" "$TMP/sequences.fasta" $ rm -f "$TMP/sequences.fasta" "$TMP/metadata.tsv" Parse Zika sequences into sequences and metadata when there is no 'name' field. This should use the 2nd entry in DEFAULT_ID_COLUMNS ('name', 'strain') instead. $ ${AUGUR} parse \ > --sequences parse/zika.fasta \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" \ > --fields col1 virus strain date region country division city db segment authors url title journal paper_url \ > --prettify-fields region country division city \ > --fix-dates monthfirst $ diff -u "parse/sequences_other.fasta" "$TMP/sequences.fasta" $ rm -f "$TMP/sequences.fasta" "$TMP/metadata.tsv" Parse Zika sequences into sequences and metadata when no output-id-field is provided and none of the fields match DEFAULT_ID_COLUMNS (e.g. ('strain', 'name')). This should use the first field as the id field and the metadata should not have an extra strain or name column. $ ${AUGUR} parse \ > --sequences parse/zika.fasta \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" \ > --fields col1 virus col3 date region country division city db segment authors url title journal paper_url \ > --prettify-fields region country division city \ > --fix-dates monthfirst $ diff -u "parse/sequences.fasta" "$TMP/sequences.fasta" $ diff "parse/metadata.tsv" "$TMP/metadata.tsv" | tr '>' '+' | tr '<' '-' 1c1 - strain\tvirus\taccession\tdate\tregion\tcountry\tdivision\tcity\tdb\tsegment\tauthors\turl\ttitle\tjournal\tpaper_url (esc) --- + col1\tvirus\tcol3\tdate\tregion\tcountry\tdivision\tcity\tdb\tsegment\tauthors\turl\ttitle\tjournal\tpaper_url (esc) $ rm -f "$TMP/sequences.fasta" "$TMP/metadata.tsv" Parse compressed Zika sequences into sequences and metadata. $ ${AUGUR} parse \ > --sequences parse/zika.fasta.gz \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" \ > --fields strain virus accession date region country division city db segment authors url title journal paper_url \ > --prettify-fields region country division city \ > --fix-dates monthfirst $ diff -u "parse/sequences.fasta" "$TMP/sequences.fasta" $ diff -u "parse/metadata.tsv" "$TMP/metadata.tsv" $ rm -f "$TMP/sequences.fasta" "$TMP/metadata.tsv" Error on the first duplicate. $ cat >$TMP/data.fasta <<~~ > >SEQ1 > AAA > >SEQ1 > AAA > >SEQ2 > AAA > >SEQ2 > AAA > ~~ $ ${AUGUR} parse \ > --sequences $TMP/data.fasta \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" \ > --fields strain ERROR: Duplicate found for 'SEQ1'. [2] Run without --fix-dates. The date is left unchanged. $ cat >$TMP/data.fasta <<~~ > >SEQ1|05/01/2020 > AAA > ~~ $ ${AUGUR} parse \ > --sequences $TMP/data.fasta \ > --output-sequences "$TMP/sequences.fasta" \ > --output-metadata "$TMP/metadata.tsv" \ > --fields strain date $ cat "$TMP/metadata.tsv" strain date SEQ1 05/01/2020 $ rm -f "$TMP/metadata.tsv" $ popd > /dev/null augur-24.2.2/tests/functional/parse/000077500000000000000000000000001456376326500173635ustar00rootroot00000000000000augur-24.2.2/tests/functional/parse/metadata.tsv000066400000000000000000000075461456376326500217150ustar00rootroot00000000000000strain virus accession date region country division city db segment authors url title journal paper_url PAN/CDC_259359_V1_V3/2015 zika KX156774 2015-12-18 North America Panama Panama Panama genbank genome Shabman et al https://www.ncbi.nlm.nih.gov/nuccore/KX156774 Direct Submission Submitted (29-APR-2016) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ COL/FLR_00024/2015 zika MF574569 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574569 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ PRVABC59 zika KU501215 2015-12-XX North America Puerto Rico Puerto Rico Puerto Rico genbank genome Lanciotti et al https://www.ncbi.nlm.nih.gov/nuccore/KU501215 Phylogeny of Zika Virus in Western Hemisphere, 2015 Emerging Infect. Dis. 22 (5), 933-935 (2016) https://www.ncbi.nlm.nih.gov/pubmed/27088323 COL/FLR_00008/2015 zika MF574562 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574562 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ Colombia/2016/ZC204Se zika KY317939 2016-01-06 South America Colombia Colombia Colombia genbank genome Quick et al https://www.ncbi.nlm.nih.gov/nuccore/KY317939 Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples Nat Protoc 12 (6), 1261-1276 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538739 ZKC2/2016 zika KX253996 2016-02-16 Oceania American Samoa American Samoa American Samoa genbank genome Wu et al https://www.ncbi.nlm.nih.gov/nuccore/KX253996 Direct Submission Submitted (18-MAY-2016) Center for Diseases Control and Prevention of Guangdong Province; National Institute of Viral Disease Control and Prevention, China https://www.ncbi.nlm.nih.gov/pubmed/ VEN/UF_1/2016 zika KX702400 2016-03-25 South America Venezuela Venezuela Venezuela genbank genome Blohm et al https://www.ncbi.nlm.nih.gov/nuccore/KX702400 Complete Genome Sequences of Identical Zika virus Isolates in a Nursing Mother and Her Infant Genome Announc 5 (17), e00231-17 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28450510 DOM/2016/BB_0059 zika KY785425 2016-04-04 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785425 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 BRA/2016/FC_6706 zika KY785433 2016-04-08 South America Brazil Brazil Brazil genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785433 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 DOM/2016/BB_0183 zika KY785420 2016-04-18 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785420 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 EcEs062_16 zika KX879603 2016-04-XX South America Ecuador Ecuador Ecuador genbank genome Marquez et al https://www.ncbi.nlm.nih.gov/nuccore/KX879603 First Complete Genome Sequences of Zika Virus Isolated from Febrile Patient Sera in Ecuador Genome Announc 5 (8), e01673-16 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28232448 HND/2016/HU_ME59 zika KY785418 2016-05-13 North America Honduras Honduras Honduras genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785418 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 augur-24.2.2/tests/functional/parse/sequences.fasta000066400000000000000000003747621456376326500224210ustar00rootroot00000000000000>PAN/CDC_259359_V1_V3/2015 gaatttgaagcgaatgctaacaacagtatcaacaggttttattttggatttggaaacgag agtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgc taaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggac ttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattca cggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagagg ctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatg ctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttggcctcctgc tgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttgg acagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgtt atatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgcccta tgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaactt gggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagccg tgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaat caagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggtt tcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtca tatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtca gcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgtcgtcttggaac atggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggtta caacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcag acatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcag acactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggac tttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccg ggaagagcatccagccagagaatctggagtaccggataatgttgtcagttcatggctccc agcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaagg ttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctag gacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatga ataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacg ctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaagg acgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcaca cggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctg gccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactcct tgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtca cagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcgg tggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactg aaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttaca ttgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcacca ttggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagaca cagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatc aaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattc tcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctta tgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgg ggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctaca acgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattgg cagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaa tggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatg gagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacaga gattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtact tcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaat gcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtat ttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccg ttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattg agagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacat gtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatca tacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggaccc aaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggca ctaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactg caagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgt tctgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaa gcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccc ttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaa agatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaa tgagtgacctggctaagcttgcaatcttgatgggtgccaccttcgcggaaatgaacactg gaggagatgtggctcatctggcgctgatagcagcattcaaagtcagaccagcgttgctgg tatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcct cgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttctcatcaatg gttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatca ccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtgga gagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtg tgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacc ccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggcccccta gcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcag atatagagatggctgggcccatagccgcggtcggtctgctaattgtcagttacgtggtct caggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatg cggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttct ccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatga ccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacg tgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaa agggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacac aagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaag gatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcagg atctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgagg tgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaa tatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaactt caggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcg tgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactc ctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgc atcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaa caagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaag cccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaa cagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatca gagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagta tagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttca tgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatgg acaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatc attctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagctt gtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagt tccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgg gcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatac ttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgccc agaggagggggcgcataggcaggaatcccaataaacctggagatgagtatctgtatggag gtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttg acaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaag tagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaac tcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataa cctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagaca gtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtgga tggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctg ggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatga cagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaa gcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttt tggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggca tagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctct cggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtgg tgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatca tcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggaga gaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggat tctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaa ctttcattaccccagctgtccaacatgcagtgaccacttcatacaacaactactccttaa tggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacg catgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctga ccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgc aggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctg ttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggaga aaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcgga ccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtggg aaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacattttta ggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttgg tcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttga accagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgca gagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtccc gaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaagg tcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaag ttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgc aaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcgg ctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtgg aagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccag gagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagc gactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacac atgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacga gccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatg tgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaaga tcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacg agaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggt cagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtga ctggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttca aggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagca tggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtacca aagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagagg aaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtgg acaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgg gaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggt atatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatc actggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcg gatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactg ctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaacc aaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaaca aagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcga gacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacc tagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgt ggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggc tcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttg cacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtgga aaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaaca agctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactga ttggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctag caaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactga tggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacct ggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaaca gagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaaatggacag acattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagac cgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcatag gtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaag ggtccacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagcc acagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcc tatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcag aggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggc gaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaag agggactagtggttagaggagaccccccggaaaacgcaaaacagcatattgacgctggga aagaccagagactccatgagtttccaccacgctggccgccaggcacagatcgccgaatag cggcggccggtgtggggaaatccatgggtct >COL/FLR_00024/2015 tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttatt ttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggatt ccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaa gaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattct agcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttc agtggggaaaaaagaggctatggaaacaataaagaagttcaagaaagatctggctgccat gctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcgg aattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgc atactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacatt ggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccat gagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtg caacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacg gagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtc gcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggat attcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctc aacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcat caggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggt tgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgt cgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgcta tgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagccta ccttgagaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctg gggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatg ctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgtt gtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactga tgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggg gggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagattt gtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacat tccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagc actggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtca agaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaa gggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaa gggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaac actgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggt tccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgc taaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccacc atttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggca caggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaat ggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcatt gggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtc ctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaa tggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagc cgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtac aggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctga ctccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggat ctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgc aatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccat gtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggc ttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatgg tgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggagga tcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcatt agagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtga tctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatct gatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaataga agagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccag agagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtt tgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatc tctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcac aatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcc caggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatca catggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaa gaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgat cctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccacctt cgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagt cagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcat gctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacct gatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttcc acgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcac actgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctct gaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgc tgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaa gcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctgg agggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaat tgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacat cacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctaga tgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatact caaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctgg agcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgc tcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtag actgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactat gtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactg gggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctg ggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacat ccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctgga ttacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggact ttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggag gagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagct aactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagt ccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgc tgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaa tgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacg tctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccactt cacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcga ggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactc caactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctt tgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacgg caatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaa gacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaac tgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatg cctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcac acatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggaga tgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttga agcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcg acctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaag gaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggt tgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaa caccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagt gctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcatt caaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaac actgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcat gcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccct agagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtctt gatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgc atggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgt gttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaa ccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatga actcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagagga gggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccat ctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcata caacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaa agggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactc acaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgta cttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctgg catcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaat tgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccag cgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgc aacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttc actgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaac aagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaa atggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcagg catcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacggg aggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacct gcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgc cgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatga agaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtgga cgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatc atctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattg gcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactat gatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccact ctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaa aagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagt gaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctga agctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcgga aacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatga ggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaa accctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatgg tcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcac tcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacg gccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattagg ggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaag gttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttg tgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaaggg cagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttgg attcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggct gggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggat gtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatga agctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaa gtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagt tatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctct taacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttct agagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagag caacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagcc aattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaa ggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttg ctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccg ccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccg ggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacag aagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttcc aactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacat gcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagacccc agttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatc tctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacat ggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcg ctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtc aggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggaga agctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgct gcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcagga tgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcag ctgtggatctccagaagagggactagtggttagaggaga >PRVABC59 gttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaaca gtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaa aaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgag cccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcag gatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtct catcaatagatggggttcagtggggaaaaaagaggctatggaaacaataaagaagttcaa gaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgagg cgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggt cactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccat atcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggaca catgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccaga tgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatca caaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccaccag gaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgat tagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgc ttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgat tgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtat gtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggc acaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgga ggtaagatcctactgctatgaggcatcaatatcagacatggcttctgacagccgctgccc aacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaac gttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgac atgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatct ggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatga cacaggacatgaaactgatgagaatagagcgaaagttgagataacgcccaattcaccgag agccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacagg ccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaa ggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccaca ctggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgt cgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggc tgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaat ggataaacttagattgaagggcgtgtcatactccttgtgtactgcagcgttcacattcac caagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggac agatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagt tgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgat gctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaa gatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgt gagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttgg aggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatc attgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggtt gggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgtt gatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaa ggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacag gtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggga agatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagt agaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtggg atctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagct gccccacggctggaaggcttgggggaaatcgtatttcgtcagagcagcaaagacaaataa cagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaa cagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggt tagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaa ggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggag gctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacatt gtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccact cagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtga agagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatg tggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatg gtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggta tggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgac tgcaggatcaactgatcacatggaccacttctcccttggagtgcttgtgatcctgctcat ggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggc agtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaat tttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgct gatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattg gacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctc cgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaat acgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctgac accactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggg gtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcat ggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgtt gctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcct gatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggc cgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacat tgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccg gctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccc catgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagc cataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgc tctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgta cagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaaga gggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagg gagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatg gaagctagatgccgcctgggatgggcacagcgaggtgcagctcttggccgtgccccccgg agagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacat tggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtg tgggagagtgataggactttatggcaatggggtcgtgatcaaaaacgggagttatgttag tgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccctcgat gctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggag agttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagc tccaaccagggttgtcgctgctgaaatggaggaggcccttagagggcttccagtgcgtta tatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcca tgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatat tatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaac aagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccg tgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagag agcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgt tccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggt catacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtg ggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgt catagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggc tggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaa tcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaaga ccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcct catagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaa gcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgt ttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctt tgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccag acacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatca tgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagt gatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattga caacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggc ccaattgccggagaccctagagaccataatgcttttggggttgctgggaacagtctcgct gggaatcttcttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggt gactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgc atgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagca aagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctggg cttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatct aatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggcc agcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaaca tgcagtgaccacctcatacaacaactactccttaatggcgatggccacgcaagctggagt gttgtttggcatgggcaaagggatgccattctacgcatgggactttggagtcccgctgct aatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgct cgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccca gaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactga cattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcat agcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctgg ggctctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaa ctcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttc tctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacagg agagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttcta ctcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaa ggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggtt ggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagg gggctggagttactacgtcgccaccatccgcaaagttcaagaagtgaaaggatacacaaa aggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccg tcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtg tgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcct ctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtg cccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggagg actggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagc gaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgga cgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggc tgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggat ccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggc ttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggt tgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgac cgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgcc agacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaaga gctaggcaaacacaaacggccacgagtctgcaccaaagaagagttcatcaacaaggttcg tagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgga agctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgag aggagagtgccagagctgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggga atttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttct agagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcagg aggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcg tataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcag gtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcctt ggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagc tgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggaca agttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatat ggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagt gaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggaga tgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatga tatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactg ggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtc cattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccagg ggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggca gctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgt gccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatg gatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacca catggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggga agacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacat taaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggacta cctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagc accaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcc tgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatgg cacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccac gcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggg gcctgaactggagatcagctgtggatctccagaagagggactagtggttagagga >COL/FLR_00008/2015 tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttatt ttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggatt ccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaa gaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattct agcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttc agtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccat gctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcgg aattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgc atactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacatt ggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccat gagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtg caacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacg gagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtc gcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggat attcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctc aacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcat caggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggt tgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgt cgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgcta tgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagccta ccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctg gggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatg ctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgtt gtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactga tgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggg gggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagattt gtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacat tccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagc actggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtca agaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaa gggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaa gggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaac actgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggt tccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgc taaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccacc atttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggca caggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaat ggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcatt gggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtc ctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaa tggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagc cgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtac aggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctga ctccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggat ctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgc aatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccat gtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggc ttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatgg tgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggagga tcatgggttcggggtatttcacactagtgtctggatcaaggttagagaagattattcatt agagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtga tctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatct gatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaataga agagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccag agagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtt tgaggaatgcccaggcactaaggtccacgtggaggaaacatgtgaaacaagaggaccatc tctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcac aatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcc caggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatca catggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaa gaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgat cctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccacctt cgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagt cagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcat gctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacct gatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttcc acgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcac actgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctct gaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgc tgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaa gcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctgg agggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaat tgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacat cacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctaga tgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatact caaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctgg agcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgc tcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtag actgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactat gtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactg gggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctg ggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacat ccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctgga ttacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggact ttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggag gagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagct aactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagt ccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgc tgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaa tgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacg tctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccactt cacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcga ggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactc caactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctt tgattgggtgacagatcattctggaaaaacagtttggtttgttccaagcgtgaggaacgg caatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaa gacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaac tgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatg cctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcac acatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggaga tgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttga agcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcg acctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaag gaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggt tgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaa caccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagt gctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcatt caaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaac actgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcat gcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccct agagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtctt gatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgc atggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgt gttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaa ccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatga actcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagagga gggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccat ctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcata caacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaa agggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactc acaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgta cttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctgg catcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaat tgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccag cgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgc aacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttc actgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaac aagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaa atggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcagg catcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacggg aggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacct gcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgc cgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatga agaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtgga cgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatc atctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattg gcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactat gatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccact ctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaa aagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagt gaaatatgaggaggatgtgaatctcggctctggcacgcgggccgtggtaagctgcgctga agctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcgga aacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatga ggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaa accctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatgg tcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcac tcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacg gccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattagg ggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaag gttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttg tgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaaggg cagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttgg attcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggct gggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggat gtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatga agctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaa gtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagt tatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctct taacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttct agagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagag caacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagcc aattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaa ggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttg ctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccg ccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccg ggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacag aagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttcc aactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacat gcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagacccc agttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatc tctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacat ggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcg ctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtc aggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggaga agctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgct gcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcagga tgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcag ctgtggatctccagaagagggactagtggttagaggaga >Colombia/2016/ZC204Se gacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttg gaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgt caatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgcc agccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagccttttt gagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaa aaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaat aatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttgg cctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatat gtacttggacagaaaagatgctggggaggccatatcttttccaaccacattggggatgaa taagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatga atgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgac gtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctag aagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctg gttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaa ccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagcca aaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcat aggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgt cttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacataga gctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatc aatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaa gcaatcagacactcaatatgtttgcaaaagaacgttagtggacagaggctggggaaatgg atgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaa aatgaccgggaagagcatccagccagagaatctggagtaccggataatgttgtcagttca tggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatag agcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttgg aagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattactt gactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattacc ttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtaga gttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagc agttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggct gtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtc atactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgg gacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctca gatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgt aatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttgggga ctcttacattgtcataggagtcggggagaagaagatcacccaccactggcataggagtgg cagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtctt gggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaaggg catccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctc acaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctat ttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgc tgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgtt cgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccg tagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgt ttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctgga agagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagagg tccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaa atcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacact gaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggtt cggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtga tccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggcta ctggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagat gaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtga tctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggcta caggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatg cccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatc aaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgccccc actgtcgttctgggctaaagatggctgttggtatggaatggagataaggcccaggaaaga accagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatca cttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaat gaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggagg attttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaat gaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagc gttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggc cttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttct catcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactga caacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgt ggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaa aggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggct ggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctg gccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgc caaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagtta cgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatggga aaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtgg tgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggt cctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggta cgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaagga agtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctagg ttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgt cacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgt caagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggca cagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactct gcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagc aggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaa tggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggagga agagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtctt agacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagc cataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaat ggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcaccca ctctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactaca gccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatcc ctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgc catcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcacc aattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggt gacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagat cgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttga gacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttc agagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagcc ggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccag cgctgcccagaggagggggcgcataggcaggaatcccaataaacctggagatgagtatct gtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaat gctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggc cgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctt tgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgc cggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataat ggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaacc gaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtt tgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccagg acacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcaga gactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccat tatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaa caagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcat gtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctatt gctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggc aatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatg gttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaac cataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgc cttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaacta ctccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgcc attctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaac acccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatccc agggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaa gaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgaccccca agtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatact gtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccac tttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaa catttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgc tggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggc ccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccga ggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgc tgtgtcccgaggaagtgcaaagctgagatggctggtggagcggggatacctgcagcccta tggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccat ccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgt gttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttca tatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcc tgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaa aagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaac cctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaa ctctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtc caccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatga ggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaa catgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggtt ctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccac acaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctggga tgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaag agttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggt tatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagt ctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatt tgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggc tctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaa catgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgc catctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaa cgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattaca aagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcaga tgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaat caccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacata ccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacat tatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatt taccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgca agacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatg ggataggctcaaacgaatggcagtcagtggagatgaytgcgttgtgaagccaattgatga taggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacaca agagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccacca cttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaaga tgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgc ttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacct ccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggag aactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggt gtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaa atggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagg gcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcag gatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttggg cgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgct agtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaa accaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgag cccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaag aaggtggcgaccttccccacccttcaatctggggcctgaactggagat >ZKC2/2016 agttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagccttcttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagatactaatgtcggaattgttggcctcctgctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacttggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcggacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaa cgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggctgataaccgctaaccccgtaatcactgaaagcactgagaactccaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaggagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgtgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcaccaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttccaggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagtaacttagtaaggtcaatggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa ttttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggcttgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggag ctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtgatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacaccatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgccgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtctggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc acgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggag tgatggaagccttgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgc tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctacgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtagccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagctgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccatgttggtgcaaagctatgggtggaacatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tttccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcccaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggacgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagatccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaagacagttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggagta tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggctgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaggccaattgatgataggtttgcacatgccctcaggttcttgaatg atatggggaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaggaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaag caccaatcttagtgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccaccctttaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggtct >VEN/UF_1/2016 agttgttactgttgctgactcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagatgctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagaaactagtgtcggaattgttggcctccttctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagccgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggtttcgctttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgtcgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtttgcaaaagaa cgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgttgtcagttcatggctcccagcacagtgggatgattgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgtggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaagaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcacccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttctgggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa tcttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaagtcagaccagcgttgctggtatccttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggagggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggttggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtg cgctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaataaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc atgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggag tgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgt tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaatatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggtgc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaata tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatg atatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaag caccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggtctt >DOM/2016/BB_0059 tggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagata ctagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagac gtgggagtgcatactacatgtacttggacagaaacgatgctggggaggccatatctttcc caaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtg atgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcg attgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaag gtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgc aaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcg aaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttt tgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccgg catacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtg ggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggaca aaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagat cctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaag gtkaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtgg acagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgcta agtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtacc ggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggac atgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaag ccaccctggggggttttggaagcctaggactggattgtgaaccgaggacaggccttgact tttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggt tccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaaca acaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttc tagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatgg atggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaac ttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcc cggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggac cttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggt tgataaccgccaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaac ttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcaccc accactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtg ccaagagaatggcagtcttgggagatacagcctgggactttggatcagttggaggcgctc tcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttg gaggaatgtcctggttctcacaaatcctcattggaacgttgctgatgtggttgggtctga acacaaagaatggatctatttccctcatgtgcttggccttagggggagtgttgatcttct tatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacga gatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagt accatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggta tctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaagggg agctcaatgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaa aaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacg gctggaaggcttgggggaaatcgtacttcgttagagcagcaaagacaaataacagctttg tcgtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggaacagctgttaagggaaaggaggctg tacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaaga gggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacag atggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatc acaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttg aaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaa gaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgca gggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatgg agataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtgactgcaggat caactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcagg aagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctgg tagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgg gtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcgg cattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacacccc gtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttgg aaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcga tggttgttccacgcactgataacatcaccttggcaatcctggctgctctgacaccactgg cccggggtacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgc tcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgg gactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaa ggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcg cattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcg gtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagag caggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatg tggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagag agatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccct ttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatggg atgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaa tgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtct ttcacactatgtggcatgtcacaaaaggatccgcgctgagaagcggtgaagggagacttg atccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctag atgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagag cgaggaacatccagactctgcccggaatatttaagacaaaggannnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcgagccttcgatgctgaaga agaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttc ctgaaatagtccgtgaagctataaaaacaagactccgtactgtgatcttagctccaacca gggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaa cagcagtcaatgtcacccattctggaacagaaatcgtcgacttaatgtgccatgccacct tcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatg aggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttg agatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcat ttccggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgggtcatacagc tcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttg tcgtgacaaccgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagatt ccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggaccca tgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaaca aacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcac actggcttgarkcaagaatgctccttgacaatatttgcctccaagatggcctcatagcct cgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttagga cggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctgg cctatcaggttgcatctgccggaataacttacacagatagaagatggtgctttgatggca cgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggag agaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccc tgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaag ccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcg ctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgc cggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatct ttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttg gggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcc tcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctc cccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgatca ccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaa ggagagaggagggagcaaccataggattctcaatggacattgacctgcggccagcctcag cttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtga ccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttg gtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgatag gttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgc actacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaa crgcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgaca caatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtag ccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctga tcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctcta cagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatct acacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccc tgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctaca aaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtg tggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagc ggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctgga gttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggcc ctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtctcaaga gtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacatag gtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatgg tgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccataca ccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtca gagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagca acaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggccta ggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaa gctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtg agcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatg gaagctatgaggcccccacacaagggtcagcatcctctctagtaaacggggttgtcaggc tcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacacca caccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagaccccc aagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggca aacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatg cagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtga acgatccaaggttctgggctctagtggacaasgaaagagagcaccacctgagaggagagt gccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaa aggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcg aagcccttggattcttgaacgaggatcactggwtggggagagagaactcaggaggtggtg ttgaagggctgggattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagggcacagggccttggcattgg ccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaag ggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtca cttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctg aggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaact ggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcg ttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaa aagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaag ttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtgg ttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggat ggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctccttt atttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttg actgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgacca ttgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaag acaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgt ggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaaca cagtcaacatggtgcgcaggatcataggtgaggaagaaaagtacatggactacctatcca cccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatct taatgttgtcaggcc >BRA/2016/FC_6706 agtttgaagcgaaagctagcaacagtatcaacaggttttatttyggatttggaaacgaga gtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgct aaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggact tctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcac ggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggc tatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgc taggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgct gaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttgga cagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgtta tatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctat gctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttg ggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgt gacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatc aagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggctt cgcgttagcagcagccgccatcgcttggcttttgggaagctcaacgagccaaaaagtcat atacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcag caatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaaca tggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttac aacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcaga catggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcaga cactcaatatgtctgyaaaagaacgttagtggacagaggctggggaaatggatgtggact ttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgg gaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctccca gcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggt tgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctagg acttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaa taacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgc tggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaagga cgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacac ggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctgg ccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactcctt gtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcac agtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggt ggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactga aagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacat tgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccat tggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacac agcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatca aatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattct cattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttat gtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggg gtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctataa cgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggc agcagcagtcaagcaagcctgggaagatggtatctgcgggatctcttctgtttcaagaat ggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatgg agttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagag attgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtactt cgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatg cccactcaaacatagagcatggaacagctttctwgtggaggatcatgggttcggggtatt tcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgt tattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattga gagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatg tgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcat acccaagtctttagctgggccactcagccatcacaataccagagagggctacaggaccca aatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcac taaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgc aagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgtt ccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaag caacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccct tggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaa gatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaat gagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgg aggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggt atctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctc gtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatgg ttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcac cttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggag agcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgt gaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccc catcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctag cgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcaga tatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctc gggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgc ggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctc cctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgac catctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgt gaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaa gggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacaca agttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaagg atccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcagga tctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggt gcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaat atttaagacaaaggatggggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnagccttcgatgctgaagaagaagcagctaactgtcttagacttgca tcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaac aagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagc ccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaac agaaatcgtcgacttaatgtgcyatgccaccttcacttcacgtctactacagccaatcag agtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtat agcagcaagaggatacatttcaacaagggttgagatgggcgaggcrgctgccatcttcat gaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatgga caccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatca ttctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttg tctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagtt ccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatggg cgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatact tgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgccca gaggagggggcgcataggcaggaatcctaacaaacctggagatgagtatctgtatggagg tgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttga caatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagt agcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaact catgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataac ctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacag tgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggat ggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgg gaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgac agagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaag caggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgctctt ggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcat agggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctc ggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggt gctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcat catggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagag aacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggatt ctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaac tttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaat ggcgatggccacgcaggctggagtgttgtttggtatgggcaaagggatgccattctacgc atgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgac cctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgca ggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgt tgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaa aaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggac cgcctgggggtggggggaggctggggctctgatcacagccgcaacctccactttgtggga aggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttag gggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggt caagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaa ccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcag agaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccg aggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggt cattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagt tcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgca aagctatgggtggaacatagtccgtcttaagagtggggtagacgtctttcatatggcggc tgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtgga agaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagg agccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcg actgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacaca tgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgag ccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgt gaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagat cattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacga gaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtc agcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgac tggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaa ggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcat ggtctcttcctggttgtggaaagagctaggcaaacacaagcggccacgagtctgtaccaa agaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagagga aaaagrktggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtgga caaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggg aaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagtcgcgccatctggta tatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatca ctggatggggagagagaactcaggaggtggtgttgaagnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnacagggccttggcattggccataatcaagtacacataccaaaacaa agtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgag acaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacct agtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtg gctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggct caaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgc acatgccctcaggttcttgaatgatatgggaaaagtcaggaaggacacacaagagtggaa accctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaa gctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgat tggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagc aaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgat ggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctg gtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacag agtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacaga cattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagacc gcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcatagg tgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagg gtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggc >DOM/2016/BB_0183 gtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagag tttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgcta aaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggactt ctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacg gcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggct atggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgct aggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctg accacagctatggcagcggaggtcactagacgtgggagtgcatactacatgtacttggac agaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttat atacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatg ctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgg gttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtg acgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatca agagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttc gcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcata tacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagc aatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacat ggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttaca acaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagac atggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagac actcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactt tttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccggg aagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccag cacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggtt gagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctagga cttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaat aacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgct ggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggac gcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacg gcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggc cacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttg tgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcaca gtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtg gacatgcaaactctgaccccagttgggaggttgataaccgccaaccccgtaatcactgaa agcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacatt gtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccatt ggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacaca gcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaa atttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaatcctc attggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctcatg tgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgggg tgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataac gacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggca gcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatg gaaaacatcatgtggagatcagtagaaggggagctcaatgcaatcctggaagagaatgga gtccaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagaga ttgcccgtgcctgtgaacgagctgccccacggctggaaggcctgggggaaatcgtacttc gttagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgc ccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtattt cacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgtt attggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgag agtgagaagaatggcacatggaggctgaagagggcccatctgatcgagatgaaaacatgt gaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcata cccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaa atgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcact aaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgca agcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttc cgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagc aacttagtaaggtcagtggtgactgcaggatcaactgatcacatggatcacttctccctt ggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaag atcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatg agtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgga ggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggta tctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcg tgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggt tttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcacc atggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggaga gcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtg aagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacccc atcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagc gaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagat atagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctca ggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcg gaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctcc ctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgacc atctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtg aagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaag ggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaa gttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaagga tccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggat ctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtg cagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaata tttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttca ggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtg atcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcct gttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcat cctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagctataaaaaca agactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcc cttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccattctggaaca gaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcaga gtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtata gcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatg accgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggac accgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcat tctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgt ctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttc cagaaaacaaaacatcaagagtgggactttgtcgtgacaaccgacatttcagagatgggc gccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatactt gatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccag aggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggt gggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgac aatatttacctccaagatggccttatagcctcgctctatcgacctgaggccgacaaagta gcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactc atgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataact tacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagt gtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatg gacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctggg aaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgaca gagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagc aggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttg gggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcata gggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcg gaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtg ctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatc atggtagcagtaggtcttctgggcttgatcaccgccaatgaactcggatggttggagaga acaaagagtgacctaagccatctaatgggaaggagagaggagggagcaaccataggattc tcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaact ttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatg gcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgca tgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgacc ctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcag gcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgtt gtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaa aagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggacc gcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaa ggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttagg ggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtc aagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaac cagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcaga gaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccga ggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtc attgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagtt caagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaa agctatgggtggaacatagtccgtctcaagagtggggtggacgtctttcatatggcggct gagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaa gaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagga gccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcga ctgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacat gagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagc cagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtg aatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatc attggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgag aaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtca gcatcctctctagtaaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgact ggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaag gaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatg gtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaa gaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaa aaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggac aaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggga aaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtat atgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcac tggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcgga tatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgct ggctgggatacccgcatcagcaggtttgatctagagaatgaagctctaatcaccaaccaa atggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaa gtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgaga caagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaaccta gtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtgg ctgctgcggaggtcagagaaagtgaccaactggttgcggagcaacggatgggataggctc aaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgca catgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaa ccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaag ctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgatt ggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagca aaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatg gccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctgg tcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacaga gtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagac attccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccg cgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggt gaggaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaaggg tctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccac agcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagccta tagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagag gacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcga ccttccccacccttcaatctggggcctgaactggagatcagctgtggatccccagaagag g >EcEs062_16 agtagttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaa cgttagtggacagaggctggggaaatggatgcggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagactgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatccatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaagaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa ttttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaggtcagaccagcgttgctggtatctttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtg ctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagctgttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgctatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacaactcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc atgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagccgcttttggag tgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgc tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtgggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggagcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaacactggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatacaggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagtttatcaacaaggttc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaaaacggttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaata tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatg atatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgctcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaatagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacgcctggagtgctgtaag caccaatcctaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggagatcgga >HND/2016/HU_ME59 gtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagag tttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgcta aaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggactt ctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacg gcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggct atggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgct aggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctg accacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggac agaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttat atacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatg ctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgg gttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtg acgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatca agagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttc gcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcata tacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagc aatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacat ggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttaca acaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagac atggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagac actcaataygtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactt tttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccggg aagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccag cacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggtt gagataacgcccawttcaccaagagccgaagccaccctggggggttttggaagcctagga cttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaat aacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgct ggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggac gcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacg gcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggc cacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttg tgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcaca gtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtg gacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaa agcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacatt gtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccatt ggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacaca gcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaa atttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctc attggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatg tgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgggg tgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataac gacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggca gcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatg gaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatgga gttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagagctccacagaga ttgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttc gtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgc ccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtattt cacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgtt attggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgag agtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgt gaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcata cccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaa atgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcact aaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgca agcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttc cgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagc aacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccctt ggagtgcttgtgattctgctcatggtgcaggaagggctaaagaagagaatgaccacaaag atcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatg agtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgga ggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggta tctttcatcttcagagctaattggacaccccgtgaaagcatgctactggccttggcctcg tgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggt tttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcacc ttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggaga gcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtg aagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacccc atcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagc gaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagat atagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctca ggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcg gaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctcc ctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgacc atctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtg aagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaag ggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaa gttggagtgggagtcatgcaagagggggtctttcacactatgtggcacgtcacaaaagga tccgcactgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggat ctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtg cagctcctggccgtgccccccggagagagagcgaggaacatccagactctgcccggaata tttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttca ggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtg atcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcct gttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttacat cctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaaca agactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaggcc cttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaaca gaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcaga gtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtata gcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatg accgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggac accgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcat tctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgt ctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttc cagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggc gccaactttaaagctgaccgtgtcatagattccaggagrtgcctaaagccggtcatactt gatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccag aggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggt gggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgac aatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagta gcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactc atgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacc tacacagatagaagatggtgctttgatggcacgaccaacaacaccatactggaagacagt gtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatg gacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctggg aaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgaca gagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagc aggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttg gggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcata gggaagatgggctttggaatggtgacccttggggccagtgcatggctcatgtggctctcg gaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtg ctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatc atggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagaga acaaagagtgacctaagccatctgatgggaaggagagaggagggggcaaccataggattc tcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaact ttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatg gcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgca tgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgacc ctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcag gcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgtt gtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaa aagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggacc gcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaa ggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttagg ggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtc aagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaac cagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcaga gaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccga ggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtc attgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagtt caagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaa agctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggct gagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaa gaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagga gccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcga ctgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacat gagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagc cagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtg aatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatc attggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgag aaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtca gcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgact ggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaag gaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatg gtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaa gaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaa aaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggac aaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggga aaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtat atgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcac tggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcgga tatgtcctagaagagatgagttgcataccaggaggaaggatgtatgcagatgacactgct ggctgggacacccgcatcagcaggtttgatctggagaatgaagctctaatcaccaaccaa atggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaa gtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgaga caagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaaccta gtggtgcaactcatccggaatatggaggctgaggaagttctagagatgcaagacttgtgg ctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctc aaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgca catgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaa ccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaag ctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgatt ggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagca aaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatg gccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctgg tcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacaga gtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagac attccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccg cgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggt gatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaaggg tctacacctggagtgctgtaagcaccaatcttaatgttgtcaggc augur-24.2.2/tests/functional/parse/sequences_other.fasta000066400000000000000000003746301456376326500236140ustar00rootroot00000000000000>KX156774 gaatttgaagcgaatgctaacaacagtatcaacaggttttattttggatttggaaacgag agtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgc taaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggac ttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattca cggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagagg ctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatg ctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttggcctcctgc tgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttgg acagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgtt atatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgcccta tgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaactt gggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagccg tgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaat caagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggtt tcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtca tatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtca gcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgtcgtcttggaac atggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggtta caacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcag acatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcag acactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggac tttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccg ggaagagcatccagccagagaatctggagtaccggataatgttgtcagttcatggctccc agcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaagg ttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctag gacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatga ataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacg ctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaagg acgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcaca cggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctg gccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactcct tgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtca cagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcgg tggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactg aaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttaca ttgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcacca ttggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagaca cagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatc aaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattc tcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctta tgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgg ggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctaca acgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattgg cagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaa tggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatg gagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacaga gattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtact tcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaat gcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtat ttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccg ttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattg agagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacat gtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatca tacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggaccc aaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggca ctaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactg caagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgt tctgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaa gcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccc ttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaa agatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaa tgagtgacctggctaagcttgcaatcttgatgggtgccaccttcgcggaaatgaacactg gaggagatgtggctcatctggcgctgatagcagcattcaaagtcagaccagcgttgctgg tatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcct cgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttctcatcaatg gttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatca ccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtgga gagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtg tgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacc ccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggcccccta gcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcag atatagagatggctgggcccatagccgcggtcggtctgctaattgtcagttacgtggtct caggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatg cggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttct ccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatga ccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacg tgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaa agggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacac aagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaag gatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcagg atctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgagg tgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaa tatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaactt caggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcg tgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactc ctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgc atcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaa caagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaag cccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaa cagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatca gagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagta tagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttca tgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatgg acaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatc attctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagctt gtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagt tccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgg gcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatac ttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgccc agaggagggggcgcataggcaggaatcccaataaacctggagatgagtatctgtatggag gtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttg acaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaag tagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaac tcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataa cctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagaca gtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtgga tggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctg ggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatga cagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaa gcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttt tggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggca tagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctct cggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtgg tgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatca tcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggaga gaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggat tctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaa ctttcattaccccagctgtccaacatgcagtgaccacttcatacaacaactactccttaa tggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacg catgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctga ccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgc aggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctg ttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggaga aaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcgga ccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtggg aaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacattttta ggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttgg tcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttga accagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgca gagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtccc gaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaagg tcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaag ttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgc aaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcgg ctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtgg aagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccag gagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagc gactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacac atgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacga gccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatg tgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaaga tcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacg agaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggt cagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtga ctggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttca aggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagca tggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtacca aagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagagg aaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtgg acaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgg gaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggt atatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatc actggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcg gatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactg ctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaacc aaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaaca aagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcga gacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacc tagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgt ggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggc tcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttg cacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtgga aaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaaca agctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactga ttggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctag caaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactga tggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacct ggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaaca gagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaaatggacag acattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagac cgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcatag gtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaag ggtccacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagcc acagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcc tatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcag aggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggc gaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaag agggactagtggttagaggagaccccccggaaaacgcaaaacagcatattgacgctggga aagaccagagactccatgagtttccaccacgctggccgccaggcacagatcgccgaatag cggcggccggtgtggggaaatccatgggtct >MF574569 tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttatt ttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggatt ccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaa gaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattct agcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttc agtggggaaaaaagaggctatggaaacaataaagaagttcaagaaagatctggctgccat gctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcgg aattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgc atactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacatt ggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccat gagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtg caacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacg gagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtc gcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggat attcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctc aacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcat caggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggt tgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgt cgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgcta tgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagccta ccttgagaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctg gggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatg ctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgtt gtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactga tgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggg gggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagattt gtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacat tccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagc actggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtca agaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaa gggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaa gggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaac actgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggt tccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgc taaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccacc atttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggca caggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaat ggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcatt gggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtc ctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaa tggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagc cgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtac aggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctga ctccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggat ctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgc aatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccat gtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggc ttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatgg tgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggagga tcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcatt agagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtga tctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatct gatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaataga agagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccag agagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtt tgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatc tctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcac aatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcc caggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatca catggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaa gaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgat cctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccacctt cgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagt cagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcat gctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacct gatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttcc acgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcac actgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctct gaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgc tgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaa gcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctgg agggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaat tgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacat cacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctaga tgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatact caaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctgg agcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgc tcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtag actgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactat gtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactg gggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctg ggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacat ccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctgga ttacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggact ttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggag gagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagct aactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagt ccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgc tgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaa tgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacg tctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccactt cacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcga ggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactc caactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctt tgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacgg caatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaa gacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaac tgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatg cctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcac acatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggaga tgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttga agcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcg acctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaag gaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggt tgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaa caccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagt gctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcatt caaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaac actgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcat gcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccct agagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtctt gatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgc atggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgt gttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaa ccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatga actcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagagga gggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccat ctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcata caacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaa agggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactc acaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgta cttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctgg catcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaat tgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccag cgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgc aacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttc actgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaac aagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaa atggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcagg catcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacggg aggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacct gcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgc cgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatga agaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtgga cgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatc atctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattg gcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactat gatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccact ctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaa aagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagt gaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctga agctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcgga aacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatga ggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaa accctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatgg tcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcac tcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacg gccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattagg ggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaag gttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttg tgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaaggg cagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttgg attcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggct gggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggat gtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatga agctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaa gtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagt tatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctct taacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttct agagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagag caacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagcc aattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaa ggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttg ctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccg ccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccg ggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacag aagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttcc aactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacat gcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagacccc agttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatc tctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacat ggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcg ctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtc aggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggaga agctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgct gcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcagga tgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcag ctgtggatctccagaagagggactagtggttagaggaga >KU501215 gttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaaca gtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaa aaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgag cccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcag gatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtct catcaatagatggggttcagtggggaaaaaagaggctatggaaacaataaagaagttcaa gaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgagg cgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggt cactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccat atcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggaca catgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccaga tgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatca caaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccaccag gaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgat tagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgc ttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgat tgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtat gtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggc acaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgga ggtaagatcctactgctatgaggcatcaatatcagacatggcttctgacagccgctgccc aacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaac gttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgac atgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatct ggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatga cacaggacatgaaactgatgagaatagagcgaaagttgagataacgcccaattcaccgag agccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacagg ccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaa ggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccaca ctggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgt cgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggc tgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaat ggataaacttagattgaagggcgtgtcatactccttgtgtactgcagcgttcacattcac caagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggac agatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagt tgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgat gctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaa gatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgt gagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttgg aggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatc attgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggtt gggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgtt gatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaa ggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacag gtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggga agatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagt agaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtggg atctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagct gccccacggctggaaggcttgggggaaatcgtatttcgtcagagcagcaaagacaaataa cagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaa cagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggt tagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaa ggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggag gctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacatt gtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccact cagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtga agagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatg tggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatg gtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggta tggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgac tgcaggatcaactgatcacatggaccacttctcccttggagtgcttgtgatcctgctcat ggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggc agtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaat tttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgct gatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattg gacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctc cgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaat acgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctgac accactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggg gtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcat ggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgtt gctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcct gatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggc cgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacat tgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccg gctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccc catgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagc cataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgc tctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgta cagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaaga gggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagg gagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatg gaagctagatgccgcctgggatgggcacagcgaggtgcagctcttggccgtgccccccgg agagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacat tggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtg tgggagagtgataggactttatggcaatggggtcgtgatcaaaaacgggagttatgttag tgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccctcgat gctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggag agttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagc tccaaccagggttgtcgctgctgaaatggaggaggcccttagagggcttccagtgcgtta tatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcca tgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatat tatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaac aagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccg tgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagag agcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgt tccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggt catacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtg ggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgt catagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggc tggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaa tcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaaga ccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcct catagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaa gcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgt ttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctt tgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccag acacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatca tgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagt gatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattga caacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggc ccaattgccggagaccctagagaccataatgcttttggggttgctgggaacagtctcgct gggaatcttcttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggt gactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgc atgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagca aagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctggg cttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatct aatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggcc agcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaaca tgcagtgaccacctcatacaacaactactccttaatggcgatggccacgcaagctggagt gttgtttggcatgggcaaagggatgccattctacgcatgggactttggagtcccgctgct aatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgct cgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccca gaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactga cattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcat agcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctgg ggctctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaa ctcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttc tctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacagg agagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttcta ctcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaa ggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggtt ggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagg gggctggagttactacgtcgccaccatccgcaaagttcaagaagtgaaaggatacacaaa aggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccg tcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtg tgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcct ctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtg cccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggagg actggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagc gaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgga cgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggc tgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggat ccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggc ttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggt tgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgac cgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgcc agacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaaga gctaggcaaacacaaacggccacgagtctgcaccaaagaagagttcatcaacaaggttcg tagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgga agctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgag aggagagtgccagagctgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggga atttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttct agagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcagg aggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcg tataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcag gtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcctt ggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagc tgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggaca agttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatat ggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagt gaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggaga tgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatga tatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactg ggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtc cattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccagg ggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggca gctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgt gccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatg gatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacca catggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggga agacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacat taaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggacta cctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagc accaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcc tgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatgg cacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccac gcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggg gcctgaactggagatcagctgtggatctccagaagagggactagtggttagagga >MF574562 tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttatt ttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggatt ccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaa gaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattct agcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttc agtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccat gctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcgg aattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgc atactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacatt ggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccat gagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtg caacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacg gagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtc gcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggat attcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctc aacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcat caggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggt tgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgt cgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgcta tgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagccta ccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctg gggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatg ctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgtt gtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactga tgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggg gggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagattt gtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacat tccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagc actggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtca agaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaa gggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaa gggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaac actgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggt tccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgc taaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccacc atttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggca caggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaat ggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcatt gggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtc ctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaa tggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagc cgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtac aggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctga ctccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggat ctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgc aatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccat gtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggc ttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatgg tgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggagga tcatgggttcggggtatttcacactagtgtctggatcaaggttagagaagattattcatt agagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtga tctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatct gatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaataga agagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccag agagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtt tgaggaatgcccaggcactaaggtccacgtggaggaaacatgtgaaacaagaggaccatc tctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcac aatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcc caggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatca catggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaa gaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgat cctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccacctt cgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagt cagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcat gctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacct gatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttcc acgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcac actgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctct gaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgc tgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaa gcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctgg agggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaat tgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacat cacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctaga tgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatact caaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctgg agcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgc tcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtag actgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactat gtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactg gggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctg ggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacat ccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctgga ttacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggact ttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggag gagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagct aactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagt ccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgc tgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaa tgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacg tctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccactt cacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcga ggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactc caactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctt tgattgggtgacagatcattctggaaaaacagtttggtttgttccaagcgtgaggaacgg caatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaa gacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaac tgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatg cctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcac acatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggaga tgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttga agcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcg acctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaag gaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggt tgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaa caccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagt gctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcatt caaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaac actgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcat gcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccct agagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtctt gatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgc atggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgt gttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaa ccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatga actcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagagga gggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccat ctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcata caacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaa agggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactc acaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgta cttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctgg catcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaat tgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccag cgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgc aacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttc actgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaac aagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaa atggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcagg catcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacggg aggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacct gcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgc cgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatga agaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtgga cgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatc atctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattg gcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactat gatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccact ctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaa aagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagt gaaatatgaggaggatgtgaatctcggctctggcacgcgggccgtggtaagctgcgctga agctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcgga aacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatga ggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaa accctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatgg tcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcac tcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacg gccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattagg ggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaag gttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttg tgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaaggg cagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttgg attcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggct gggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggat gtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatga agctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaa gtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagt tatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctct taacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttct agagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagag caacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagcc aattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaa ggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttg ctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccg ccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccg ggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacag aagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttcc aactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacat gcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagacccc agttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatc tctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacat ggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcg ctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtc aggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggaga agctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgct gcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcagga tgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcag ctgtggatctccagaagagggactagtggttagaggaga >KY317939 gacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttg gaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgt caatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgcc agccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagccttttt gagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaa aaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaat aatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttgg cctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatat gtacttggacagaaaagatgctggggaggccatatcttttccaaccacattggggatgaa taagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatga atgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgac gtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctag aagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctg gttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaa ccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagcca aaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcat aggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgt cttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacataga gctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatc aatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaa gcaatcagacactcaatatgtttgcaaaagaacgttagtggacagaggctggggaaatgg atgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaa aatgaccgggaagagcatccagccagagaatctggagtaccggataatgttgtcagttca tggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatag agcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttgg aagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattactt gactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattacc ttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtaga gttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagc agttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggct gtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtc atactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgg gacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctca gatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgt aatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttgggga ctcttacattgtcataggagtcggggagaagaagatcacccaccactggcataggagtgg cagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtctt gggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaaggg catccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctc acaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctat ttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgc tgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgtt cgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccg tagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgt ttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctgga agagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagagg tccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaa atcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacact gaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggtt cggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtga tccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggcta ctggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagat gaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtga tctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggcta caggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatg cccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatc aaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgccccc actgtcgttctgggctaaagatggctgttggtatggaatggagataaggcccaggaaaga accagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatca cttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaat gaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggagg attttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaat gaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagc gttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggc cttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttct catcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactga caacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgt ggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaa aggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggct ggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctg gccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgc caaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagtta cgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatggga aaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtgg tgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggt cctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggta cgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaagga agtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctagg ttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgt cacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgt caagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggca cagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactct gcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagc aggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaa tggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggagga agagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtctt agacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagc cataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaat ggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcaccca ctctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactaca gccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatcc ctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgc catcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcacc aattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggt gacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagat cgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttga gacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttc agagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagcc ggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccag cgctgcccagaggagggggcgcataggcaggaatcccaataaacctggagatgagtatct gtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaat gctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggc cgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctt tgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgc cggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataat ggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaacc gaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtt tgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccagg acacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcaga gactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccat tatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaa caagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcat gtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctatt gctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggc aatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatg gttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaac cataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgc cttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaacta ctccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgcc attctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaac acccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatccc agggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaa gaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgaccccca agtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatact gtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccac tttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaa catttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgc tggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggc ccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccga ggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgc tgtgtcccgaggaagtgcaaagctgagatggctggtggagcggggatacctgcagcccta tggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccat ccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgt gttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttca tatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcc tgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaa aagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaac cctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaa ctctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtc caccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatga ggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaa catgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggtt ctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccac acaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctggga tgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaag agttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggt tatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagt ctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatt tgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggc tctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaa catgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgc catctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaa cgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattaca aagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcaga tgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaat caccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacata ccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacat tatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatt taccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgca agacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatg ggataggctcaaacgaatggcagtcagtggagatgaytgcgttgtgaagccaattgatga taggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacaca agagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccacca cttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaaga tgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgc ttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacct ccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggag aactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggt gtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaa atggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagg gcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcag gatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttggg cgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgct agtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaa accaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgag cccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaag aaggtggcgaccttccccacccttcaatctggggcctgaactggagat >KX253996 agttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagccttcttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagatactaatgtcggaattgttggcctcctgctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacttggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcggacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaa cgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggctgataaccgctaaccccgtaatcactgaaagcactgagaactccaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaggagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgtgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcaccaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttccaggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagtaacttagtaaggtcaatggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa ttttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggcttgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggag ctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtgatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacaccatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgccgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtctggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc acgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggag tgatggaagccttgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgc tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctacgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtagccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagctgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccatgttggtgcaaagctatgggtggaacatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tttccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcccaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggacgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagatccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaagacagttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggagta tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggctgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaggccaattgatgataggtttgcacatgccctcaggttcttgaatg atatggggaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaggaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaag caccaatcttagtgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccaccctttaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggtct >KX702400 agttgttactgttgctgactcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagatgctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagaaactagtgtcggaattgttggcctccttctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagccgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggtttcgctttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgtcgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtttgcaaaagaa cgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgttgtcagttcatggctcccagcacagtgggatgattgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgtggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaagaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcacccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttctgggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa tcttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaagtcagaccagcgttgctggtatccttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggagggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggttggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtg cgctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaataaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc atgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggag tgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgt tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaatatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggtgc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaata tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatg atatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaag caccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggtctt >KY785425 tggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagata ctagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagac gtgggagtgcatactacatgtacttggacagaaacgatgctggggaggccatatctttcc caaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtg atgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcg attgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaag gtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgc aaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcg aaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttt tgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccgg catacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtg ggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggaca aaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagat cctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaag gtkaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtgg acagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgcta agtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtacc ggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggac atgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaag ccaccctggggggttttggaagcctaggactggattgtgaaccgaggacaggccttgact tttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggt tccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaaca acaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttc tagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatgg atggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaac ttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcc cggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggac cttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggt tgataaccgccaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaac ttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcaccc accactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtg ccaagagaatggcagtcttgggagatacagcctgggactttggatcagttggaggcgctc tcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttg gaggaatgtcctggttctcacaaatcctcattggaacgttgctgatgtggttgggtctga acacaaagaatggatctatttccctcatgtgcttggccttagggggagtgttgatcttct tatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacga gatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagt accatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggta tctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaagggg agctcaatgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaa aaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacg gctggaaggcttgggggaaatcgtacttcgttagagcagcaaagacaaataacagctttg tcgtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggaacagctgttaagggaaaggaggctg tacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaaga gggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacag atggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatc acaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttg aaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaa gaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgca gggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatgg agataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtgactgcaggat caactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcagg aagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctgg tagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgg gtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcgg cattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacacccc gtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttgg aaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcga tggttgttccacgcactgataacatcaccttggcaatcctggctgctctgacaccactgg cccggggtacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgc tcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgg gactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaa ggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcg cattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcg gtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagag caggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatg tggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagag agatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccct ttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatggg atgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaa tgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtct ttcacactatgtggcatgtcacaaaaggatccgcgctgagaagcggtgaagggagacttg atccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctag atgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagag cgaggaacatccagactctgcccggaatatttaagacaaaggannnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcgagccttcgatgctgaaga agaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttc ctgaaatagtccgtgaagctataaaaacaagactccgtactgtgatcttagctccaacca gggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaa cagcagtcaatgtcacccattctggaacagaaatcgtcgacttaatgtgccatgccacct tcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatg aggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttg agatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcat ttccggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgggtcatacagc tcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttg tcgtgacaaccgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagatt ccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggaccca tgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaaca aacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcac actggcttgarkcaagaatgctccttgacaatatttgcctccaagatggcctcatagcct cgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttagga cggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctgg cctatcaggttgcatctgccggaataacttacacagatagaagatggtgctttgatggca cgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggag agaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccc tgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaag ccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcg ctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgc cggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatct ttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttg gggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcc tcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctc cccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgatca ccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaa ggagagaggagggagcaaccataggattctcaatggacattgacctgcggccagcctcag cttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtga ccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttg gtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgatag gttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgc actacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaa crgcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgaca caatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtag ccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctga tcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctcta cagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatct acacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccc tgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctaca aaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtg tggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagc ggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctgga gttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggcc ctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtctcaaga gtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacatag gtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatgg tgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccataca ccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtca gagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagca acaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggccta ggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaa gctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtg agcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatg gaagctatgaggcccccacacaagggtcagcatcctctctagtaaacggggttgtcaggc tcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacacca caccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagaccccc aagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggca aacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatg cagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtga acgatccaaggttctgggctctagtggacaasgaaagagagcaccacctgagaggagagt gccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaa aggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcg aagcccttggattcttgaacgaggatcactggwtggggagagagaactcaggaggtggtg ttgaagggctgggattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagggcacagggccttggcattgg ccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaag ggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtca cttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctg aggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaact ggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcg ttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaa aagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaag ttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtgg ttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggat ggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctccttt atttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttg actgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgacca ttgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaag acaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgt ggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaaca cagtcaacatggtgcgcaggatcataggtgaggaagaaaagtacatggactacctatcca cccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatct taatgttgtcaggcc >KY785433 agtttgaagcgaaagctagcaacagtatcaacaggttttatttyggatttggaaacgaga gtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgct aaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggact tctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcac ggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggc tatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgc taggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgct gaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttgga cagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgtta tatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctat gctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttg ggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgt gacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatc aagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggctt cgcgttagcagcagccgccatcgcttggcttttgggaagctcaacgagccaaaaagtcat atacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcag caatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaaca tggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttac aacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcaga catggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcaga cactcaatatgtctgyaaaagaacgttagtggacagaggctggggaaatggatgtggact ttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgg gaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctccca gcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggt tgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctagg acttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaa taacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgc tggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaagga cgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacac ggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctgg ccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactcctt gtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcac agtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggt ggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactga aagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacat tgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccat tggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacac agcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatca aatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattct cattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttat gtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggg gtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctataa cgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggc agcagcagtcaagcaagcctgggaagatggtatctgcgggatctcttctgtttcaagaat ggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatgg agttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagag attgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtactt cgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatg cccactcaaacatagagcatggaacagctttctwgtggaggatcatgggttcggggtatt tcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgt tattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattga gagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatg tgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcat acccaagtctttagctgggccactcagccatcacaataccagagagggctacaggaccca aatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcac taaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgc aagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgtt ccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaag caacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccct tggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaa gatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaat gagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgg aggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggt atctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctc gtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatgg ttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcac cttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggag agcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgt gaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccc catcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctag cgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcaga tatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctc gggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgc ggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctc cctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgac catctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgt gaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaa gggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacaca agttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaagg atccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcagga tctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggt gcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaat atttaagacaaaggatggggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnagccttcgatgctgaagaagaagcagctaactgtcttagacttgca tcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaac aagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagc ccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaac agaaatcgtcgacttaatgtgcyatgccaccttcacttcacgtctactacagccaatcag agtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtat agcagcaagaggatacatttcaacaagggttgagatgggcgaggcrgctgccatcttcat gaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatgga caccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatca ttctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttg tctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagtt ccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatggg cgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatact tgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgccca gaggagggggcgcataggcaggaatcctaacaaacctggagatgagtatctgtatggagg tgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttga caatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagt agcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaact catgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataac ctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacag tgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggat ggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgg gaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgac agagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaag caggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgctctt ggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcat agggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctc ggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggt gctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcat catggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagag aacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggatt ctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaac tttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaat ggcgatggccacgcaggctggagtgttgtttggtatgggcaaagggatgccattctacgc atgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgac cctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgca ggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgt tgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaa aaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggac cgcctgggggtggggggaggctggggctctgatcacagccgcaacctccactttgtggga aggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttag gggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggt caagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaa ccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcag agaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccg aggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggt cattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagt tcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgca aagctatgggtggaacatagtccgtcttaagagtggggtagacgtctttcatatggcggc tgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtgga agaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagg agccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcg actgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacaca tgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgag ccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgt gaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagat cattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacga gaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtc agcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgac tggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaa ggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcat ggtctcttcctggttgtggaaagagctaggcaaacacaagcggccacgagtctgtaccaa agaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagagga aaaagrktggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtgga caaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggg aaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagtcgcgccatctggta tatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatca ctggatggggagagagaactcaggaggtggtgttgaagnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnacagggccttggcattggccataatcaagtacacataccaaaacaa agtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgag acaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacct agtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtg gctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggct caaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgc acatgccctcaggttcttgaatgatatgggaaaagtcaggaaggacacacaagagtggaa accctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaa gctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgat tggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagc aaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgat ggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctg gtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacag agtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacaga cattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagacc gcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcatagg tgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagg gtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggc >KY785420 gtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagag tttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgcta aaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggactt ctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacg gcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggct atggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgct aggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctg accacagctatggcagcggaggtcactagacgtgggagtgcatactacatgtacttggac agaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttat atacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatg ctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgg gttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtg acgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatca agagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttc gcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcata tacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagc aatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacat ggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttaca acaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagac atggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagac actcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactt tttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccggg aagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccag cacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggtt gagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctagga cttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaat aacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgct ggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggac gcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacg gcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggc cacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttg tgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcaca gtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtg gacatgcaaactctgaccccagttgggaggttgataaccgccaaccccgtaatcactgaa agcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacatt gtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccatt ggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacaca gcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaa atttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaatcctc attggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctcatg tgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgggg tgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataac gacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggca gcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatg gaaaacatcatgtggagatcagtagaaggggagctcaatgcaatcctggaagagaatgga gtccaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagaga ttgcccgtgcctgtgaacgagctgccccacggctggaaggcctgggggaaatcgtacttc gttagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgc ccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtattt cacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgtt attggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgag agtgagaagaatggcacatggaggctgaagagggcccatctgatcgagatgaaaacatgt gaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcata cccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaa atgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcact aaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgca agcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttc cgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagc aacttagtaaggtcagtggtgactgcaggatcaactgatcacatggatcacttctccctt ggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaag atcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatg agtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgga ggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggta tctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcg tgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggt tttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcacc atggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggaga gcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtg aagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacccc atcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagc gaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagat atagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctca ggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcg gaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctcc ctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgacc atctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtg aagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaag ggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaa gttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaagga tccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggat ctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtg cagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaata tttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttca ggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtg atcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcct gttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcat cctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagctataaaaaca agactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcc cttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccattctggaaca gaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcaga gtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtata gcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatg accgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggac accgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcat tctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgt ctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttc cagaaaacaaaacatcaagagtgggactttgtcgtgacaaccgacatttcagagatgggc gccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatactt gatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccag aggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggt gggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgac aatatttacctccaagatggccttatagcctcgctctatcgacctgaggccgacaaagta gcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactc atgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataact tacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagt gtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatg gacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctggg aaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgaca gagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagc aggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttg gggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcata gggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcg gaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtg ctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatc atggtagcagtaggtcttctgggcttgatcaccgccaatgaactcggatggttggagaga acaaagagtgacctaagccatctaatgggaaggagagaggagggagcaaccataggattc tcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaact ttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatg gcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgca tgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgacc ctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcag gcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgtt gtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaa aagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggacc gcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaa ggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttagg ggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtc aagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaac cagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcaga gaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccga ggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtc attgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagtt caagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaa agctatgggtggaacatagtccgtctcaagagtggggtggacgtctttcatatggcggct gagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaa gaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagga gccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcga ctgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacat gagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagc cagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtg aatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatc attggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgag aaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtca gcatcctctctagtaaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgact ggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaag gaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatg gtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaa gaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaa aaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggac aaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggga aaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtat atgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcac tggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcgga tatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgct ggctgggatacccgcatcagcaggtttgatctagagaatgaagctctaatcaccaaccaa atggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaa gtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgaga caagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaaccta gtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtgg ctgctgcggaggtcagagaaagtgaccaactggttgcggagcaacggatgggataggctc aaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgca catgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaa ccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaag ctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgatt ggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagca aaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatg gccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctgg tcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacaga gtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagac attccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccg cgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggt gaggaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaaggg tctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccac agcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagccta tagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagag gacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcga ccttccccacccttcaatctggggcctgaactggagatcagctgtggatccccagaagag g >KX879603 agtagttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaac agtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaa aaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtga gcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatca ggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtc tcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttca agaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgag gcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggagg tcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggcca tatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggac acatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccag atgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatc acaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccacta ggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttga ttagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcg cttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctga ttgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggta tgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatgg cacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcgg aggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcc caacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaa cgttagtggacagaggctggggaaatggatgcggactttttggcaaagggagcctggtga catgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatc tggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatg acacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaa gagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacag gccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcaca aggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccac actggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactg tcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggagg ctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaa tggataaacttagactgaagggcgtgtcatactccttgtgtaccgcagcgttcacattca ccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcaggga cagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccag ttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatga tgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaaga agatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactg tgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttg gaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaat cattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggt tgggtctgaacacaaagaatggatccatttcccttatgtgcttggccttagggggagtgt tgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaaga aggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggaca ggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctggg aagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcag tagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgg gatctgtaaagaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagc tgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaata acagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatgga acagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaagg ttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaa aggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatgga ggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacat tgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccac tcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtg aagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacat gtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaat ggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggt atggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtga ctgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctca tggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatgg cagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaa ttttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgc tgatagcggcattcaaggtcagaccagcgttgctggtatctttcatcttcagagctaatt ggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatct ccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaa tacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctga caccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcgggg ggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtca tggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgt tgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcc tgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatgg ccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtaca ttgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtcccc ggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtcccc ccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatag ccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtg ctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgt acagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaag agggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaag ggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccat ggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccg gagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggaca ttggagctgttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagt gtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgtta gtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcga tgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccagga gagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttag ctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgtt atatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcc atgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtata ttatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaa caagggttgagatgggcgaggcggctgctatcttcatgaccgccacgccaccaggaaccc gtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagaga gagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttg ttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacggg tcatacaactcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagt gggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtg tcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctgg ctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcagga atcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaag accatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcc tcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttca agcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctg tttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgct ttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggacca gacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatc atgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagccgcttttggag tgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattg acaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcgg cccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgc tgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatgg tgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattg catgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagc aaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtgggtcttctgg gcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatc taatgggaaggagagaggagggagcaaccataggattctcaatggacattgacctgcggc cagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaac atgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggag tgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgc taatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgc tcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgccc agaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactg acattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactca tagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctg gggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactgga actcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagctt ctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacag gagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttct actcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctca aggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggt tggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagag ggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaa aaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtcc gtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgt gtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcc tctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgt gcccatacaccagcactatgatggaaacactggagcgactgcagcgtaggtatgggggag gactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggag cgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatgg acgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcggg ctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaagga tccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatacaggacatggg cttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacgggg ttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatga ccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgc cagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaag agctaggcaaacacaaacggccacgagtctgtaccaaagaagagtttatcaacaaggttc gtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtgg aagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctga gaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaagggg aatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttc tagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcag gaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtc gcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagca ggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggcct tggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccag ctgaaaaagggaaaacggttatggacattatttcgagacaagaccaaagggggagcggac aagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaata tggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaag tgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggag atgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatg atatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaact gggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggt ccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccag gggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgctcaaatgtggc agctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctg tgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaat ggatgaccactgaagacatgcttgtggtgtggaatagagtgtggattgaggagaacgacc acatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaaggg aagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaaca ttaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggact acctatccacccaagttcgctacttgggtgaagaagggtctacgcctggagtgctgtaag caccaatcctaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagc ctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatg gcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaacccca cgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctgg ggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagacc ccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttc caccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatcca tgggagatcgga >KY785418 gtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagag tttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgcta aaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggactt ctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacg gcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggct atggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgct aggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctg accacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggac agaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttat atacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatg ctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgg gttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtg acgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatca agagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttc gcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcata tacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagc aatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacat ggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttaca acaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagac atggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagac actcaataygtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactt tttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccggg aagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccag cacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggtt gagataacgcccawttcaccaagagccgaagccaccctggggggttttggaagcctagga cttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaat aacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgct ggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggac gcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacg gcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggc cacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttg tgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcaca gtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtg gacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaa agcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacatt gtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccatt ggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacaca gcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaa atttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctc attggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatg tgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtgggg tgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataac gacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggca gcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatg gaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatgga gttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagagctccacagaga ttgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttc gtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgc ccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtattt cacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgtt attggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgag agtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgt gaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcata cccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaa atgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcact aaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgca agcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttc cgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagc aacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctccctt ggagtgcttgtgattctgctcatggtgcaggaagggctaaagaagagaatgaccacaaag atcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatg agtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactgga ggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggta tctttcatcttcagagctaattggacaccccgtgaaagcatgctactggccttggcctcg tgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggt tttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcacc ttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggaga gcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtg aagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgacccc atcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagc gaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagat atagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctca ggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcg gaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctcc ctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgacc atctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtg aagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaag ggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaa gttggagtgggagtcatgcaagagggggtctttcacactatgtggcacgtcacaaaagga tccgcactgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggat ctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtg cagctcctggccgtgccccccggagagagagcgaggaacatccagactctgcccggaata tttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttca ggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtg atcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcct gttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttacat cctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaaca agactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaggcc cttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaaca gaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcaga gtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtata gcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatg accgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggac accgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcat tctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgt ctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttc cagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggc gccaactttaaagctgaccgtgtcatagattccaggagrtgcctaaagccggtcatactt gatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccag aggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggt gggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgac aatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagta gcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactc atgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacc tacacagatagaagatggtgctttgatggcacgaccaacaacaccatactggaagacagt gtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatg gacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctggg aaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgaca gagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagc aggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttg gggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcata gggaagatgggctttggaatggtgacccttggggccagtgcatggctcatgtggctctcg gaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtg ctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatc atggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagaga acaaagagtgacctaagccatctgatgggaaggagagaggagggggcaaccataggattc tcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaact ttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatg gcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgca tgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgacc ctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcag gcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgtt gtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaa aagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggacc gcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaa ggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttagg ggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtc aagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaac cagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcaga gaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccga ggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtc attgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagtt caagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaa agctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggct gagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaa gaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccagga gccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcga ctgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacat gagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagc cagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtg aatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatc attggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgag aaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtca gcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgact ggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaag gaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatg gtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaa gaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaa aaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggac aaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatggga aaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtat atgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcac tggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcgga tatgtcctagaagagatgagttgcataccaggaggaaggatgtatgcagatgacactgct ggctgggacacccgcatcagcaggtttgatctggagaatgaagctctaatcaccaaccaa atggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaa gtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgaga caagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaaccta gtggtgcaactcatccggaatatggaggctgaggaagttctagagatgcaagacttgtgg ctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctc aaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgca catgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaa ccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaag ctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgatt ggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagca aaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatg gccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctgg tcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacaga gtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagac attccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccg cgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggt gatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaaggg tctacacctggagtgctgtaagcaccaatcttaatgttgtcaggc augur-24.2.2/tests/functional/parse/zika.fasta000066400000000000000000003777451456376326500213700ustar00rootroot00000000000000>PAN/CDC_259359_V1_V3/2015|zika|KX156774|2015-12-18|north_america|panama|panama|panama|genbank|genome|Shabman et al|https://www.ncbi.nlm.nih.gov/nuccore/KX156774|Direct Submission|Submitted (29-APR-2016) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA|https://www.ncbi.nlm.nih.gov/pubmed/ gaatttgaagcgaatgctaacaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgttgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctacaacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccaccttcgcggaaatgaacactggaggagatgtggctcatctggcgctgatagcagcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatagccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagctgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtccacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagaccccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttccaccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatccatgggtct >COL/FLR_00024/2015|zika|MF574569|2015-12|south_america|colombia|colombia|colombia|genbank|genome|Pickett et al|https://www.ncbi.nlm.nih.gov/nuccore/MF574569|Direct Submission|Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA|https://www.ncbi.nlm.nih.gov/pubmed/ tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaacaataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgagaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgttgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggaga >PRVABC59|zika|KU501215|2015-12-XX|north_america|puerto_rico|puerto_rico|puerto_rico|genbank|genome|Lanciotti et al|https://www.ncbi.nlm.nih.gov/nuccore/KU501215|Phylogeny of Zika Virus in Western Hemisphere, 2015|Emerging Infect. Dis. 22 (5), 933-935 (2016)|https://www.ncbi.nlm.nih.gov/pubmed/27088323 gttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaacaataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccaccaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttctgacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaagttgagataacgcccaattcaccgagagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtactgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtatttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggaccacttctcccttggagtgcttgtgatcctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggatgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaacgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccctcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaggcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccataatgcttttggggttgctgggaacagtctcgctgggaatcttcttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacctcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggcatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggctctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgtcgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgcaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagctgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcgtataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaagagggactagtggttagagga >COL/FLR_00008/2015|zika|MF574562|2015-12-XX|south_america|colombia|colombia|colombia|genbank|genome|Pickett et al|https://www.ncbi.nlm.nih.gov/nuccore/MF574562|Direct Submission|Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA|https://www.ncbi.nlm.nih.gov/pubmed/ tcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgttgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggctttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggatcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtgaaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacagatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggccgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggaga >Colombia/2016/ZC204Se|zika|KY317939|2016-01-06|south_america|colombia|colombia|colombia|genbank|genome|Quick et al|https://www.ncbi.nlm.nih.gov/nuccore/KY317939|Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples|Nat Protoc 12 (6), 1261-1276 (2017)|https://www.ncbi.nlm.nih.gov/pubmed/28538739 gacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaaagatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtttgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgttgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcataggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggctggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgaytgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttgcgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggcgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagat >ZKC2/2016|zika|KX253996|2016-02-16|oceania|american_samoa|american_samoa|american_samoa|genbank|genome|Wu et al|https://www.ncbi.nlm.nih.gov/nuccore/KX253996|Direct Submission|Submitted (18-MAY-2016) Center for Diseases Control and Prevention of Guangdong Province; National Institute of Viral Disease Control and Prevention, China|https://www.ncbi.nlm.nih.gov/pubmed/ agttgttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagccttcttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagatactaatgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacttggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcggacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggctgataaccgctaaccccgtaatcactgaaagcactgagaactccaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaggagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgtgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcaccaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttccaggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagtaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggcttgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggagctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtgatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacaccatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgccgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtctggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcacgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccttgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctacgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtagccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagctgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccatgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctttccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcccaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggacgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagatccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaagacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggagtatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggctgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaggccaattgatgataggtttgcacatgccctcaggttcttgaatgatatggggaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaggaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttagtgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccaccctttaatctggggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagaccccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttccaccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatccatgggtct >VEN/UF_1/2016|zika|KX702400|2016-03-25|south_america|venezuela|venezuela|venezuela|genbank|genome|Blohm et al|https://www.ncbi.nlm.nih.gov/nuccore/KX702400|Complete Genome Sequences of Identical Zika virus Isolates in a Nursing Mother and Her Infant|Genome Announc 5 (17), e00231-17 (2017)|https://www.ncbi.nlm.nih.gov/pubmed/28450510 agttgttactgttgctgactcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagatgctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagaaactagtgtcggaattgttggcctccttctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagccgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggtttcgctttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgtcgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtttgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgttgtcagttcatggctcccagcacagtgggatgattgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaagaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcacccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttctgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaatcttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatccttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggagggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggttggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgcgctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaataaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgttgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaatatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggtgcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcattagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagaccccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttccaccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatccatgggtctt >DOM/2016/BB_0059|zika|KY785425|2016-04-04|north_america|dominican_republic|dominican_republic|dominican_republic|genbank|genome|Metsky et al|https://www.ncbi.nlm.nih.gov/nuccore/KY785425|Zika virus evolution and spread in the Americas|Nature 546 (7658), 411-415 (2017)|https://www.ncbi.nlm.nih.gov/pubmed/28538734 tggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactacatgtacttggacagaaacgatgctggggaggccatatctttcccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtkaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctaggactggattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgccaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagatacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaatcctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctcatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaatgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgttagagcagcaaagacaaataacagctttgtcgtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctgacaccactggcccggggtacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcatgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagctataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccattctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaaccgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgarkcaagaatgctccttgacaatatttgcctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacttacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgatcaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggagcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacrgcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtctcaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcatcctctctagtaaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaasgaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggwtggggagagagaactcaggaggtggtgttgaagggctgggattannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccattgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgaggaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcc >BRA/2016/FC_6706|zika|KY785433|2016-04-08|south_america|brazil|brazil|brazil|genbank|genome|Metsky et al|https://www.ncbi.nlm.nih.gov/nuccore/KY785433|Zika virus evolution and spread in the Americas|Nature 546 (7658), 411-415 (2017)|https://www.ncbi.nlm.nih.gov/pubmed/28538734 agtttgaagcgaaagctagcaacagtatcaacaggttttatttyggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagccgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgyaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgtggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcttctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaacagctttctwgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgacaacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctcgggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgcyatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcrgctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcctaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgctcttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaggctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggctctgatcacagccgcaacctccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtagacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaagcggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagrktggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagtcgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagtcaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggc >DOM/2016/BB_0183|zika|KY785420|2016-04-18|north_america|dominican_republic|dominican_republic|dominican_republic|genbank|genome|Metsky et al|https://www.ncbi.nlm.nih.gov/nuccore/KY785420|Zika virus evolution and spread in the Americas|Nature 546 (7658), 411-415 (2017)|https://www.ncbi.nlm.nih.gov/pubmed/28538734 gtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactacatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgccaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaatcctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttccctcatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaatgcaatcctggaagagaatggagtccaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcctgggggaaatcgtacttcgttagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatggcacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcaccatggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagctataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccattctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaaccgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggccttatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacttacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgatcaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggagcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtctcaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcatcctctctagtaaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggatacccgcatcagcaggtttgatctagagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcggagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgaggaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcagctgtggatccccagaagagg >EcEs062_16|zika|KX879603|2016-04-XX|south_america|ecuador|ecuador|ecuador|genbank|genome|Marquez et al|https://www.ncbi.nlm.nih.gov/nuccore/KX879603|First Complete Genome Sequences of Zika Virus Isolated from Febrile Patient Sera in Ecuador|Genome Announc 5 (8), e01673-16 (2017)|https://www.ncbi.nlm.nih.gov/pubmed/28232448 agtagttgatctgtgtgaatcagactgcgacagttcgagtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaatatgtctgcaaaagaacgttagtggacagaggctggggaaatggatgcggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccaattcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagactgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatccatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaagaaccccatgtggagaggtccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcagtggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctgaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaggtcagaccagcgttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctgctggccttggcctcgtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagttatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcgctgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcttggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagctgttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttgcatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaagcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgctatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacaactcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagatgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccataatggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagccgcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgactcttggggccagcgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtgggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctaatgggaaggagagaggagggagcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaacactggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatacaggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagtttatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagtcgcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacggttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcattcggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgctcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaatagagtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacgcctggagtgctgtaagcaccaatcctaatgttgtcaggcctgctagtcagccacagcttggggaaagctgtgcagcctgtgacccccccaggagaagctgggaaaccaagcctatagtcaggccgagaacgccatggcacggaagaagccatgctgcctgtgagcccctcagaggacactgagtcaaaaaaccccacgcgcttggaggcgcaggatgggaaaagaaggtggcgaccttccccacccttcaatctggggcctgaactggagatcagctgtggatctccagaagagggactagtggttagaggagaccccccggaaaacgcaaaacagcatattgacgctgggaaagaccagagactccatgagtttccaccacgctggccgccaggcacagatcgccgaatagcggcggccggtgtggggaaatccatgggagatcgga >HND/2016/HU_ME59|zika|KY785418|2016-05-13|north_america|honduras|honduras|honduras|genbank|genome|Metsky et al|https://www.ncbi.nlm.nih.gov/nuccore/KY785418|Zika virus evolution and spread in the Americas|Nature 546 (7658), 411-415 (2017)|https://www.ncbi.nlm.nih.gov/pubmed/28538734 gtttgaagcgaaagctagcaacagtatcaacaggttttattttggatttggaaacgagagtttctggtcatgaaaaacccaaaaaagaaatccggaggattccggattgtcaatatgctaaaacgcggagtagcccgtgtgagcccctttgggggcttgaagaggctgccagccggacttctgctgggtcatgggcccatcaggatggtcttggcgattctagcctttttgagattcacggcaatcaagccatcactgggtctcatcaatagatggggttcagtggggaaaaaagaggctatggaaataataaagaagttcaagaaagatctggctgccatgctgagaataatcaatgctaggaaggagaagaagagacgaggcgcagatactagtgtcggaattgttggcctcctgctgaccacagctatggcagcggaggtcactagacgtgggagtgcatactatatgtacttggacagaaacgatgctggggaggccatatcttttccaaccacattggggatgaataagtgttatatacagatcatggatcttggacacatgtgtgatgccaccatgagctatgaatgccctatgctggatgagggggtggaaccagatgacgtcgattgttggtgcaacacgacgtcaacttgggttgtgtacggaacctgccatcacaaaaaaggtgaagcacggagatctagaagagctgtgacgctcccctcccattccactaggaagctgcaaacgcggtcgcaaacctggttggaatcaagagaatacacaaagcacttgattagagtcgaaaattggatattcaggaaccctggcttcgcgttagcagcagctgccatcgcttggcttttgggaagctcaacgagccaaaaagtcatatacttggtcatgatactgctgattgccccggcatacagcatcaggtgcataggagtcagcaatagggactttgtggaaggtatgtcaggtgggacttgggttgatgttgtcttggaacatggaggttgtgtcaccgtaatggcacaggacaaaccgactgtcgacatagagctggttacaacaacagtcagcaacatggcggaggtaagatcctactgctatgaggcatcaatatcagacatggcttcggacagccgctgcccaacacaaggtgaagcctaccttgacaagcaatcagacactcaataygtctgcaaaagaacgttagtggacagaggctggggaaatggatgtggactttttggcaaagggagcctggtgacatgcgctaagtttgcatgctccaagaaaatgaccgggaagagcatccagccagagaatctggagtaccggataatgctgtcagttcatggctcccagcacagtgggatgatcgttaatgacacaggacatgaaactgatgagaatagagcgaaggttgagataacgcccawttcaccaagagccgaagccaccctggggggttttggaagcctaggacttgattgtgaaccgaggacaggccttgacttttcagatttgtattacttgactatgaataacaagcactggttggttcacaaggagtggttccacgacattccattaccttggcacgctggggcagacaccggaactccacactggaacaacaaagaagcactggtagagttcaaggacgcacatgccaaaaggcaaactgtcgtggttctagggagtcaagaaggagcagttcacacggcccttgctggagctctggaggctgagatggatggtgcaaagggaaggctgtcctctggccacttgaaatgtcgcctgaaaatggataaacttagattgaagggcgtgtcatactccttgtgtaccgcagcgttcacattcaccaagatcccggctgaaacactgcacgggacagtcacagtggaggtacagtacgcagggacagatggaccttgcaaggttccagctcagatggcggtggacatgcaaactctgaccccagttgggaggttgataaccgctaaccccgtaatcactgaaagcactgagaactctaagatgatgctggaacttgatccaccatttggggactcttacattgtcataggagtcggggagaagaagatcacccaccactggcacaggagtggcagcaccattggaaaagcatttgaagccactgtgagaggtgccaagagaatggcagtcttgggagacacagcctgggactttggatcagttggaggcgctctcaactcattgggcaagggcatccatcaaatttttggagcagctttcaaatcattgtttggaggaatgtcctggttctcacaaattctcattggaacgttgctgatgtggttgggtctgaacacaaagaatggatctatttcccttatgtgcttggccttagggggagtgttgatcttcttatccacagccgtctctgctgatgtggggtgctcggtggacttctcaaagaaggagacgagatgcggtacaggggtgttcgtctataacgacgttgaagcctggagggacaggtacaagtaccatcctgactccccccgtagattggcagcagcagtcaagcaagcctgggaagatggtatctgcgggatctcctctgtttcaagaatggaaaacatcatgtggagatcagtagaaggggagctcaacgcaatcctggaagagaatggagttcaactgacggtcgttgtgggatctgtaaaaaaccccatgtggagagctccacagagattgcccgtgcctgtgaacgagctgccccacggctggaaggcttgggggaaatcgtacttcgtcagagcagcaaagacaaataacagctttgtcgtggatggtgacacactgaaggaatgcccactcaaacatagagcatggaacagctttcttgtggaggatcatgggttcggggtatttcacactagtgtctggctcaaggttagagaagattattcattagagtgtgatccagccgttattggaacagctgttaagggaaaggaggctgtacacagtgatctaggctactggattgagagtgagaagaatgacacatggaggctgaagagggcccatctgatcgagatgaaaacatgtgaatggccaaagtcccacacattgtggacagatggaatagaagagagtgatctgatcatacccaagtctttagctgggccactcagccatcacaataccagagagggctacaggacccaaatgaaagggccatggcacagtgaagagcttgaaattcggtttgaggaatgcccaggcactaaggtccacgtggaggaaacatgtggaacaagaggaccatctctgagatcaaccactgcaagcggaagggtgatcgaggaatggtgctgcagggagtgcacaatgcccccactgtcgttccgggctaaagatggctgttggtatggaatggagataaggcccaggaaagaaccagaaagcaacttagtaaggtcaatggtgactgcaggatcaactgatcacatggatcacttctcccttggagtgcttgtgattctgctcatggtgcaggaagggctaaagaagagaatgaccacaaagatcatcataagcacatcaatggcagtgctggtagctatgatcctgggaggattttcaatgagtgacctggctaagcttgcaattttgatgggtgccaccttcgcggaaatgaacactggaggagatgtagctcatctggcgctgatagcggcattcaaagtcagaccagcgttgctggtatctttcatcttcagagctaattggacaccccgtgaaagcatgctactggccttggcctcgtgtcttttgcaaactgcgatctccgccttggaaggcgacctgatggttctcatcaatggttttgctttggcctggttggcaatacgagcgatggttgttccacgcactgataacatcaccttggcaatcctggctgctctgacaccactggcccggggcacactgcttgtggcgtggagagcaggccttgctacttgcggggggtttatgctcctctctctgaagggaaaaggcagtgtgaagaagaacttaccatttgtcatggccctgggactaaccgctgtgaggctggtcgaccccatcaacgtggtgggactgctgttgctcacaaggagtgggaagcggagctggccccctagcgaagtactcacagctgttggcctgatatgcgcattggctggagggttcgccaaggcagatatagagatggctgggcccatggccgcggtcggtctgctaattgtcagttacgtggtctcaggaaagagtgtggacatgtacattgaaagagcaggtgacatcacatgggaaaaagatgcggaagtcactggaaacagtccccggctcgatgtggcgctagatgagagtggtgatttctccctggtggaggatgacggtccccccatgagagagatcatactcaaggtggtcctgatgaccatctgtggcatgaacccaatagccataccctttgcagctggagcgtggtacgtatacgtgaagactggaaaaaggagtggtgctctatgggatgtgcctgctcccaaggaagtaaaaaagggggagaccacagatggagtgtacagagtaatgactcgtagactgctaggttcaacacaagttggagtgggagtcatgcaagagggggtctttcacactatgtggcacgtcacaaaaggatccgcactgagaagcggtgaagggagacttgatccatactggggagatgtcaagcaggatctggtgtcatactgtggtccatggaagctagatgccgcctgggacgggcacagcgaggtgcagctcctggccgtgccccccggagagagagcgaggaacatccagactctgcccggaatatttaagacaaaggatggggacattggagcggttgcgctggattacccagcaggaacttcaggatctccaatcctagacaagtgtgggagagtgataggactttatggcaatggggtcgtgatcaaaaatgggagttatgttagtgccatcacccaagggaggagggaggaagagactcctgttgagtgcttcgagccttcgatgctgaagaagaagcagctaactgtcttagacttacatcctggagctgggaaaaccaggagagttcttcctgaaatagtccgtgaagccataaaaacaagactccgtactgtgatcttagctccaaccagggttgtcgctgctgaaatggaggaggcccttagagggcttccagtgcgttatatgacaacagcagtcaatgtcacccactctggaacagaaatcgtcgacttaatgtgccatgccaccttcacttcacgtctactacagccaatcagagtccccaactataatctgtatattatggatgaggcccacttcacagatccctcaagtatagcagcaagaggatacatttcaacaagggttgagatgggcgaggcggctgccatcttcatgaccgccacgccaccaggaacccgtgacgcatttccggactccaactcaccaattatggacaccgaagtggaagtcccagagagagcctggagctcaggctttgattgggtgacggatcattctggaaaaacagtttggtttgttccaagcgtgaggaacggcaatgagatcgcagcttgtctgacaaaggctggaaaacgggtcatacagctcagcagaaagacttttgagacagagttccagaaaacaaaacatcaagagtgggactttgtcgtgacaactgacatttcagagatgggcgccaactttaaagctgaccgtgtcatagattccaggagrtgcctaaagccggtcatacttgatggcgagagagtcattctggctggacccatgcctgtcacacatgccagcgctgcccagaggagggggcgcataggcaggaatcccaacaaacctggagatgagtatctgtatggaggtgggtgcgcagagactgacgaagaccatgcacactggcttgaagcaagaatgctccttgacaatatttacctccaagatggcctcatagcctcgctctatcgacctgaggccgacaaagtagcagccattgagggagagttcaagcttaggacggagcaaaggaagacctttgtggaactcatgaaaagaggagatcttcctgtttggctggcctatcaggttgcatctgccggaataacctacacagatagaagatggtgctttgatggcacgaccaacaacaccatactggaagacagtgtgccggcagaggtgtggaccagacacggagagaaaagagtgctcaaaccgaggtggatggacgccagagtttgttcagatcatgcggccctgaagtcattcaaggagtttgccgctgggaaaagaggagcggcttttggagtgatggaagccctgggaacactgccaggacacatgacagagagattccaggaagccattgacaacctcgctgtgctcatgcgggcagagactggaagcaggccttacaaagccgcggcggcccaattgccggagaccctagagaccattatgcttttggggttgctgggaacagtctcgctgggaatctttttcgtcttgatgaggaacaagggcatagggaagatgggctttggaatggtgacccttggggccagtgcatggctcatgtggctctcggaaattgagccagccagaattgcatgtgtcctcattgttgtgttcctattgctggtggtgctcatacctgagccagaaaagcaaagatctccccaggacaaccaaatggcaatcatcatcatggtagcagtaggtcttctgggcttgattaccgccaatgaactcggatggttggagagaacaaagagtgacctaagccatctgatgggaaggagagaggagggggcaaccataggattctcaatggacattgacctgcggccagcctcagcttgggccatctatgctgccttgacaactttcattaccccagccgtccaacatgcagtgaccacttcatacaacaactactccttaatggcgatggccacgcaagctggagtgttgtttggtatgggcaaagggatgccattctacgcatgggactttggagtcccgctgctaatgataggttgctactcacaattaacacccctgaccctaatagtggccatcattttgctcgtggcgcactacatgtacttgatcccagggctgcaggcagcagctgcgcgtgctgcccagaagagaacggcagctggcatcatgaagaaccctgttgtggatggaatagtggtgactgacattgacacaatgacaattgacccccaagtggagaaaaagatgggacaggtgctactcatagcagtagccgtctccagcgccatactgtcgcggaccgcctgggggtggggggaggctggggccctgatcacagccgcaacttccactttgtgggaaggctctccgaacaagtactggaactcctctacagccacttcactgtgtaacatttttaggggaagttacttggctggagcttctctaatctacacagtaacaagaaacgctggcttggtcaagagacgtgggggtggaacaggagagaccctgggagagaaatggaaggcccgcttgaaccagatgtcggccctggagttctactcctacaaaaagtcaggcatcaccgaggtgtgcagagaagaggcccgccgcgccctcaaggacggtgtggcaacgggaggccatgctgtgtcccgaggaagtgcaaagctgagatggttggtggagcggggatacctgcagccctatggaaaggtcattgatcttggatgtggcagagggggctggagttactacgccgccaccatccgcaaagttcaagaagtgaaaggatacacaaaaggaggccctggtcatgaagaacccgtgttggtgcaaagctatgggtggaacatagtccgtcttaagagtggggtggacgtctttcatatggcggctgagccgtgtgacacgttgctgtgtgacataggtgagtcatcatctagtcctgaagtggaagaagcacggacgctcagagtcctctccatggtgggggattggcttgaaaaaagaccaggagccttttgtataaaagtgttgtgcccatacaccagcactatgatggaaaccctggagcgactgcagcgtaggtatgggggaggactggtcagagtgccactctcccgcaactctacacatgagatgtactgggtctctggagcgaaaagcaacaccataaaaagtgtgtccaccacgagccagctcctcttggggcgcatggacgggcctaggaggccagtgaaatatgaggaggatgtgaatctcggctctggcacgcgggctgtggtaagctgcgctgaagctcccaacatgaagatcattggtaaccgcattgaaaggatccgcagtgagcacgcggaaacgtggttctttgacgagaaccacccatataggacatgggcttaccatggaagctatgaggcccccacacaagggtcagcgtcctctctaataaacggggttgtcaggctcctgtcaaaaccctgggatgtggtgactggagtcacaggaatagccatgaccgacaccacaccgtatggtcagcaaagagttttcaaggaaaaagtggacactagggtgccagacccccaagaaggcactcgtcaggttatgagcatggtctcttcctggttgtggaaagagctaggcaaacacaaacggccacgagtctgtaccaaagaagagttcatcaacaaggttcgtagcaatgcagcattaggggcaatatttgaagaggaaaaagagtggaagactgcagtggaagctgtgaacgatccaaggttctgggctctagtggacaaggaaagagagcaccacctgagaggagagtgccagagttgtgtgtacaacatgatgggaaaaagagaaaagaaacaaggggaatttggaaaggccaagggcagccgcgccatctggtatatgtggctaggggctagatttctagagttcgaagcccttggattcttgaacgaggatcactggatggggagagagaactcaggaggtggtgttgaagggctgggattacaaagactcggatatgtcctagaagagatgagttgcataccaggaggaaggatgtatgcagatgacactgctggctgggacacccgcatcagcaggtttgatctggagaatgaagctctaatcaccaaccaaatggagaaagggcacagggccttggcattggccataatcaagtacacataccaaaacaaagtggtaaaggtccttagaccagctgaaaaagggaaaacagttatggacattatttcgagacaagaccaaagggggagcggacaagttgtcacttacgctcttaacacatttaccaacctagtggtgcaactcatccggaatatggaggctgaggaagttctagagatgcaagacttgtggctgctgcggaggtcagagaaagtgaccaactggttgcagagcaacggatgggataggctcaaacgaatggcagtcagtggagatgattgcgttgtgaagccaattgatgataggtttgcacatgccctcaggttcttgaatgatatgggaaaagttaggaaggacacacaagagtggaaaccctcaactggatgggacaactgggaagaagttccgttttgctcccaccacttcaacaagctccatctcaaggacgggaggtccattgtggttccctgccgccaccaagatgaactgattggccgggcccgcgtctctccaggggcgggatggagcatccgggagactgcttgcctagcaaaatcatatgcgcaaatgtggcagctcctttatttccacagaagggacctccgactgatggccaatgccatttgttcatctgtgccagttgactgggttccaactgggagaactacctggtcaatccatggaaagggagaatggatgaccactgaagacatgcttgtggtgtggaacagagtgtggattgaggagaacgaccacatggaagacaagaccccagttacgaaatggacagacattccctatttgggaaaaagggaagacttgtggtgtggatctctcatagggcacagaccgcgcaccacctgggctgagaacattaaaaacacagtcaacatggtgcgcaggatcataggtgatgaagaaaagtacatggactacctatccacccaagttcgctacttgggtgaagaagggtctacacctggagtgctgtaagcaccaatcttaatgttgtcaggc augur-24.2.2/tests/functional/parse/zika.fasta.gz000066400000000000000000000252341456376326500217660ustar00rootroot00000000000000_zika.fastasTGſWG;="0g3xX;"n 眺ЫT a]*+܇O}{񗏟m|>{y,~3?t_Or?|l1]_fNO>zpn/w}>yo8t gy&v7NL/7y_?}ﳽOlml><ߖc>s+2s4o% rxUFy|%׿6|֛[K&?fH |Q_y}cd6|>t\|p ;|^ZW|zrluជ) 0|uu @kxÏU7<5꧸@?`pyVyuo_~ehy0NY}𺬉֫.)uLufK]qVn[uO~Zs-kx=tàKdžQ[Rkŵl *+*,;{}._WuɬX 삊% .7lZS+jÍR!l\,Zu`ckMmLƱyUd\,m!P+qs60!Ti=q+C3W9232Sb ckKXvMܺP9-Q&f#kەJP0̾ayiU%0,Q*rLA),ju&IhZMwkk :- כ¸YuiUF5Y+U71¸?"X{g+fHfনd2iUY^,ZrZ/aqG>#Hz(0 9uC'MQUFʪ$] p0n26툼Q1A\^fHxJ`%t֛YU *M s"Ggb aGjHy$Z}ȤR a7&@Uc@! 1!XC*(j(P-Ӎ;*!4(@[B%uCA=)A- Eڳ)ALYJIj̀;tu]*kG{P{:$7 4&ԧ!iAJ**!w핺4š,mtSM`?$kU1R#pBHɦ|V q8N) V@)d Ys8vS3M$xk?B1$ -V? Z]sx-d ?q*Pɤ/qa]jC{2{8:3h X"S,R"WFE@P;kl {ԙBYͤ#+0h=mK" #J%d gnZ4bY;Kt ӈ+5Pmk:im+XܩU[qf..dL0g8BΖ`j) ? PcU*B)brBPcC'5& = e(Fd $z`) F5MI0Zg=s/7DXKTIH=90"+pw XSjy䐶us 4P!) YKɨqfg]XBfZ 7l*JÍeϱ a9(ah~5iT%C llZ ۄwYϠro 7c z16;pLծ3Tk+IBfBԒ!,0I+;jDYSJYb@*pp9:ZuvFBIȒXh :KU8TFEE✟65~g dGD&TAԴYRAG.[CMU{j2@' 1L+ְ0Ih" KpޗH~OU2|qR]JV&6R:`.3-! O^j;[0uz'ǬA]?n֛{ܒRUmg9LUa euv!neTv7P~M{Y=n]f9uzRgX4ch\ӏ\Rm+灱DBSgJ!ڭdE*G87l?Eդ A768y~C{MJҦB9ԓf`4 Զ()UւN.o͇oJZ`T(:oB Dw[!UBZ*t,3`F3Aئ6YF4to-Zh!%ђ6L ᮽ -R ɦ uG)kT4:eC}Ρ2:6B>6p330[&"NAcFUFJ\Z)xj ;p&֥RMle7)BJq$?F{w`|Ă絴8Cv49%6Œ^#K;7Ё{sm 6\7G-3&xIuNE*hjJOW3e А8 ȰI  C+.*wZJ$l*KNrs$sJw!> JU°v1h0U\pLاN4IYBہfs/JH5{[$cxL`R[`% h-ja5)fe9W[6#'z)t)$*G&wK, VQN0ͨE!ضx)G`F_= L[CGML6H X[|V)AZ() i|9: {L:]l2ulP̹u;(e^g@f iApya_0eTj&gi7:( . WքɚRt>u5F!o=|=غ{}ݝ{LOG`Z_-^<{o!Og4$Hm#oAjq@Y[Yc 3-MPbYZPOCKzRmh_tVNJ1XmוD뉒 E[SFgli 0̅ xgl˪2yٌmZglWؚԎ)錭Vgl;ckX:+h/|E~@.+a;c[00M=mhTf2t;c"eKn[peSisEglhM"Sdtv=[PME+n*@~^4c띱傲PV nHnS߃3J᝱Y[) :c0[ E .0(V â30Xgl;c S&kf90lO*3+md)L}UH}HS׈w?>>%ͭ͝`[O={~p}Ȝ豱+,~k9ɏÃl>AN瓿N_~{1ݟ~6)H`c67_O|>ښ|g۷lL>eݸ{k:vd怋)Qã`53@b)B x*ÑGN*PN+lRu%z :h#L'7㸔Lޤ\Ѧ'űX UP"6}rݍ6(su<(WNwHH.嚧\CjUtUYS\7Sr=8P vٱ)WP\ɴn\Ƅ@IG-(l_%Xr3_+\M^Z2y)T0̍RK)׳Rr8嚝rEBQlK@,1{_lj>=Mk\ןrm"B\A5@sl )W:*/E":]+!O ԎѦ83 Wc@ӌWc[-W+J| :8pM7 Ww.IEV6Z,~Ӭ8*!Wl V1N:sԒukF\?F\yBZG.}U#}z5p@\W2eKnp5peSis;הȺWĘR:S`逫p{/J qM(ϵ\YoxN&O;03%I;2sYj6Ħ7ped}WNЈE7fTzN+I0e rW+³c|Vk@مW:sU!/Gg!aO]Wbzοom~gs{srw{cƽSS}8_OW}ý7M^Nl?䛽×M{8W=u"_L'_1bg^M~_l^쁽\~o-'O{~ͭ{c>`2uv8k<Qc-!Xk&5C24w\6͔oY :WlB-mq2#~R6/NLCEт18aGB9[Ejv>ꊯ qfV@T`9CC2ha2!X!<2@!X?Wb+RRͬBtĎjŕ!RJz!X~F`3U:U% ,[ϲCRS&)2:,l*j\qSCb; 25!Xf. ]\ 4uV%*.lNrs$sIOyz<bCL;WyƑ eBΰ|[[gikg{Yn/g@ف\|۷9<תQ|٭o?y٭>3YNjy/n}?}%/6y ﳹOs +/K犟Mx|Eg2dJtCW\N7-q9 //^?^ /ux`@hy>`scYx7= fM=?Gڿ.f5/h>_}3ds&Ӎۛ'{ݝ q)~aW%fpt~fõc@q$r9֘V:86"f^ҋ `\_ci+p)XdB|M'p)@5-%s1^]M9D};Bsk<Vq^lgb. ? yTN ,?JKWíŇQ7,qF} _kjsjx7, Bv7͸]`פvnJp֌%'pوcsq*^NQvٵpEW8ܐƒ*lJ^ ?:sԒun%pW1qfY?s9T׎%Y@G9\t,^9\T\N7e+.tZDaAsp*h3xؼvn*j\qS9\*]e79\uXP,Y5p9b\^27M-Fr9AR4 2A]=å]DO *i0,V&2^Z p٢6*΍MKCqڵGNtpK@>kvΟõ+md)L}UH}HSk: m| e9 [?7o=O66v[;dq.//gzDßf~>NjlGz@?/Go-&۹gnپ}V6;W{Db|Jk#ؒ}!΢E@ D@y}м>\D@kNeF D@!>օLɎzԍ,E@fuVDK4~N1d#( p WM$tgޤGV olI|kG]fͿe "%MAD[>"a斳F@a>7Un)B_WT<0 2ʳM)Г>5Rk*#(+!y'%!QI%z?+@@6 Z/ي E@UK6 gXr%"!.+!1ΨqMk|7V;<}X(xG@mM@;!x)P?U#s*:QF _V4< DfVKh8hXKed^d'K@!}0FG(MZ%ZQ5Cj38's/Mz7ɜIL`ݱ̓a"2_1t,Y+٢DAGMh:O<5g2я Z qXf t$tgoeiog,ØȌyPd;ՑUTQFQH@- !:람'9lT~?wM}LE_\D̅ޱ̵2X&?彦:,YQ5XΤpj)erOTc e21>9xc7ɜl,Cd$.ܗg'2s.?]: DD2B*蘅Q2u,VeJeYfXr^i,3c*`1v^.y2QN(oyɜX X&vQ[`TΔczLu{2gU"[O2.H$5"3s^‡ ϤX`M : 3)Lg8a2y,:c[Z`?ܡ5U`o=rhTu{e7~51upͱܤs]JFdWt&n"k%n2k6 7+wp3 2spS|D$pDBwv/!p}*M&K{$sIgMU*jP,$5neQ\H̅͵7i_MpPlV2Tvp3:I.}pBARÅ-D֋ ;Lo4iD 2v&h,<>2J>+*CAN/^7/u>=,~cQ,,'/^N?ۛNZΦ\k+{4/>ٙ|2n޼w2uk{c] @f8IU:zHlC++:qkvD,4t5GIWf j++W3Qzj5uE;6"]aqkp_NkA~At8 Jqion cysHWS,$5 k']3IƵ!]bWH^HQw;zH+ϳ/teGj9-*JYb@*pp9:ZtEkDը@qW;"-!4yU;yQ+s,<6QIW;INR؆h ވ8rNIMH}Di&]M%ݦNteb9\̗kS>U NH0˘{Qj.tG$׳g"]aHsj+wh $ 'ciyIl-[FeSrzNx蠔*4\X'kft]HZtcn=_ٱٓv}v};7zvsz:a+|H c:DѢ8JqStiDgfS:3+U :!暽 J[cfIASXZ'3Ggfv>(ζG?0}axm jSzw̆GtnYp-NlvftƆ|Yu3rxgf!{:3{͙YE_6w8L4_CYk1X,~lf̢2)'wf\%3(7(6qYR~ fVj™Ybfͥ՚eC7[%3ˆNj3*^pP0sLr2T;ykLYdަT> 13EJ1 v!ظzUKHrlsoQWCUm&̬ [r//փ8f6 љY,:,(,`Otf3$s)73+(3'df!TNh?ƁA&TfHl\3 ~!^\5fV6G*;3iy@e4o YHll1f[~cewkaugur-24.2.2/tests/functional/refine/000077500000000000000000000000001456376326500175215ustar00rootroot00000000000000augur-24.2.2/tests/functional/refine/cram/000077500000000000000000000000001456376326500204435ustar00rootroot00000000000000augur-24.2.2/tests/functional/refine/cram/_setup.sh000066400000000000000000000000701456376326500222730ustar00rootroot00000000000000export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" augur-24.2.2/tests/functional/refine/cram/not-timetree-mutations-error.t000066400000000000000000000012061456376326500264130ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Run refine without a time tree, but try to request number of mutations per branch as the divergence unit. This approach does not make sense and should not work without an alignment FASTA. $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --coalescent opt \ > --date-confidence \ > --date-inference marginal \ > --clock-filter-iqd 4 \ > --seed 314159 \ > --divergence-units mutations > /dev/null *ERROR: alignment is required* (glob) [1] augur-24.2.2/tests/functional/refine/cram/not-timetree-mutations-per-site.t000066400000000000000000000021241456376326500270120ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Run refine without inferring a time tree. This is one way to get named internal nodes for downstream analyses and does not require an alignment FASTA. $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --coalescent opt \ > --date-confidence \ > --date-inference marginal \ > --clock-filter-iqd 4 \ > --seed 314159 \ > --divergence-units mutations-per-site &> /dev/null Confirm that trees match expected topology and branch lengths, given that the output should not be a time tree. $ python3 "$TESTDIR/../../../../scripts/diff_trees.py" \ > "$TESTDIR/../data/not_time_tree.nwk" \ > tree.nwk \ > --significant-digits 2 {} $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$TESTDIR/../data/mutations_per_site_branch_lengths.json" \ > branch_lengths.json \ > --significant-digits 0 \ > --exclude-paths "root['generated_by']['version']" "root['input_tree']" {} augur-24.2.2/tests/functional/refine/cram/not-timetree-mutations.t000066400000000000000000000022211456376326500252620ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Run refine without a time tree, but request number of mutations per branch as the divergence unit. This approach only works when we provide an alignment FASTA. $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --alignment "$TESTDIR/../data/aligned.fasta" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --coalescent opt \ > --date-confidence \ > --date-inference marginal \ > --clock-filter-iqd 4 \ > --seed 314159 \ > --divergence-units mutations &> /dev/null Confirm that trees match expected topology and branch lengths, given that the output should not be a time tree. $ python3 "$TESTDIR/../../../../scripts/diff_trees.py" \ > "$TESTDIR/../data/not_time_tree.nwk" \ > tree.nwk \ > --significant-digits 2 {} $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$TESTDIR/../data/integer_branch_lengths.json" \ > branch_lengths.json \ > --significant-digits 0 \ > --exclude-paths "root['generated_by']['version']" "root['input_tree']" "root['alignment']" {} augur-24.2.2/tests/functional/refine/cram/timetree-mutations.t000066400000000000000000000013511456376326500244670ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Build a time tree with mutations as the reported divergence unit. $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --alignment "$TESTDIR/../data/aligned.fasta" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --timetree \ > --coalescent opt \ > --date-confidence \ > --date-inference marginal \ > --clock-filter-iqd 4 \ > --seed 314159 \ > --divergence-units mutations &> /dev/null Confirm that TreeTime trees match expected topology and branch lengths. $ python3 "$TESTDIR/../../../../scripts/diff_trees.py" "$TESTDIR/../data/tree.nwk" tree.nwk --significant-digits 2 {} augur-24.2.2/tests/functional/refine/cram/timetree.t000066400000000000000000000020301456376326500224410ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try building a time tree. $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --alignment "$TESTDIR/../data/aligned.fasta" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --timetree \ > --coalescent opt \ > --date-confidence \ > --date-inference marginal \ > --clock-filter-iqd 4 \ > --seed 314159 &> /dev/null Confirm that TreeTime trees match expected topology and branch lengths. $ python3 "$TESTDIR/../../../../scripts/diff_trees.py" "$TESTDIR/../data/tree.nwk" tree.nwk --significant-digits 2 {} Confirm that JSON output includes details about the clock rate. $ grep -A 15 '\"clock\"' branch_lengths.json "clock": { "cov": [ [ .*, (re) .* (re) ], [ .*, (re) .* (re) ] ], "intercept": .*, (re) "rate": .*, (re) "rate_std": .*, (re) "rtt_Tmrca": .* (re) }, augur-24.2.2/tests/functional/refine/cram/timetree_with_fixed_clock_rate.t000066400000000000000000000015071456376326500270510ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Try building a time tree with a fixed clock rate and clock std dev. $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --alignment "$TESTDIR/../data/aligned.fasta" \ > --metadata "$TESTDIR/../data/metadata.tsv" \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --timetree \ > --coalescent opt \ > --date-confidence \ > --date-inference marginal \ > --clock-rate 0.0012 \ > --clock-std-dev 0.0002 \ > --clock-filter-iqd 4 \ > --seed 314159 &> /dev/null Confirm that JSON output does not include information about the clock rate std dev, since it was provided by the user. $ grep -A 4 '\"clock\"' branch_lengths.json "clock": { "intercept": .*, (re) "rate": .*, (re) "rtt_Tmrca": .* (re) }, augur-24.2.2/tests/functional/refine/cram/year-bounds-error.t000066400000000000000000000030511456376326500242060ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create metadata with a strain that has partial ambiguity on the century-level (20XX) so that --year-bounds is applied. $ cat >metadata.tsv <<~~ > strain date > PAN/CDC_259359_V1_V3/2015 20XX-XX-XX > ~~ Check that invalid --year-bounds provides useful error messages. $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --alignment "$TESTDIR/../data/aligned.fasta" \ > --metadata metadata.tsv \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --timetree \ > --year-bounds 1950 1960 1970 \ > --divergence-units mutations > /dev/null ERROR: Invalid value for --year-bounds: The year bounds [1950, 1960, 1970] must have only one (lower) or two (lower, upper) bounds. [2] $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --alignment "$TESTDIR/../data/aligned.fasta" \ > --metadata metadata.tsv \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --timetree \ > --year-bounds 0 1000 \ > --divergence-units mutations > /dev/null ERROR: Invalid value for --year-bounds: 0 is not a valid year. [2] $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --alignment "$TESTDIR/../data/aligned.fasta" \ > --metadata metadata.tsv \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --timetree \ > --year-bounds -2000 -3000 \ > --divergence-units mutations > /dev/null ERROR: Invalid value for --year-bounds: -3000 is not a valid year. [2] augur-24.2.2/tests/functional/refine/cram/year-bounds.t000066400000000000000000000040411456376326500230570ustar00rootroot00000000000000Setup $ source "$TESTDIR"/_setup.sh Create a copy of tests/functional/refine/data/metadata.tsv, adding partial ambiguity on the century-level (20XX) for the first strain PAN/CDC_259359_V1_V3/2015. $ cat >metadata.tsv <<~~ > strain date > PAN/CDC_259359_V1_V3/2015 20XX-XX-XX > COL/FLR_00024/2015 2015-12-XX > PRVABC59 2015-12-XX > COL/FLR_00008/2015 2015-12-XX > Colombia/2016/ZC204Se 2016-01-06 > ZKC2/2016 2016-02-16 > VEN/UF_1/2016 2016-03-25 > DOM/2016/BB_0059 2016-04-04 > BRA/2016/FC_6706 2016-04-08 > DOM/2016/BB_0183 2016-04-18 > EcEs062_16 2016-04-XX > HND/2016/HU_ME59 2016-05-13 > ~~ Limit ambiguous dates to be within (2000, 2020). $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --alignment "$TESTDIR/../data/aligned.fasta" \ > --metadata metadata.tsv \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --timetree \ > --year-bounds 2000 2020 \ > --coalescent opt \ > --date-confidence \ > --date-inference marginal \ > --clock-filter-iqd 4 \ > --seed 314159 \ > --divergence-units mutations &> /dev/null Check that the inferred date is 2020-12-31. TODO: Using jq woud be cleaner, but requires an extra dev dependency. $ python3 -c 'import json, sys; print(json.load(sys.stdin)["nodes"]["PAN/CDC_259359_V1_V3/2015"]["date"])' < branch_lengths.json 2020-12-31 Reverse the order to check that order does not matter. $ ${AUGUR} refine \ > --tree "$TESTDIR/../data/tree_raw.nwk" \ > --alignment "$TESTDIR/../data/aligned.fasta" \ > --metadata metadata.tsv \ > --output-tree tree.nwk \ > --output-node-data branch_lengths.json \ > --timetree \ > --year-bounds 2020 2000 \ > --coalescent opt \ > --date-confidence \ > --date-inference marginal \ > --clock-filter-iqd 4 \ > --seed 314159 \ > --divergence-units mutations &> /dev/null Run the same check as above. $ python3 -c 'import json, sys; print(json.load(sys.stdin)["nodes"]["PAN/CDC_259359_V1_V3/2015"]["date"])' < branch_lengths.json 2020-12-31 augur-24.2.2/tests/functional/refine/data/000077500000000000000000000000001456376326500204325ustar00rootroot00000000000000augur-24.2.2/tests/functional/refine/data/aligned.fasta000066400000000000000000003535411456376326500230700ustar00rootroot00000000000000>KX369547.1 Zika virus strain PF13/251013-18, complete genome GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGAAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCCTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCGAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >BRA/2016/FC_6706 NNNNNNNNNNNNNNNNNNNNNAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCCGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGYAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCTTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTWGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCGGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCYATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCRGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCTAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTCTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAGGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCC GCAACCTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTA GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAG CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGRKTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGTCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTCAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >HND/2016/HU_ME59 NNNNNNNNNNNNNNNNNNNNNNGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATAYGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAWTTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGCTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTA AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTACTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCACTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCCTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTACATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGR TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATACTGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACCCTTGGGGCCAGT GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTGATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTTGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATCCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >PAN/CDC_259359_V1_V3/2015 NNNNNNNNNNNNNNNNNNNNGAATTTGAAGCGAATGCTAACAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTACAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTGGCTCATCTGGCGCTGATAGCAGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATAGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCTGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCCACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >COL/FLR_00008/2015 NNNTCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGCTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGATCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGAAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACAGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCCGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >VEN/UF_1/2016 GACTCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGATGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTTCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATTGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCACCCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAATATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >Colombia/2016/ZC204Se NNNNNNNNNNNNGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAAAGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CATAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGCTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGAYTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGCGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >ZKC2/2016 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTCTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAATGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACTTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGCTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCCAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAGGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACCAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCAGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTTGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGAGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTGATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACC ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCCGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTCTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCACGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCTTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTACGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTAGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTTTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGACGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGATCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAGTATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGCTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAGG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAGGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTTAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >EcEs062_16 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGCGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGACTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCCATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAGAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAG GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCTGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCTATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAACTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCCGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTGGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACACTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATACAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTTATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACG GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCTCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAATAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACGCCTGGAGTGCTGTAAGCACCAATCCTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >DOM/2016/BB_0183 NNNNNNNNNNNNNNNNNNNNNNGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTCCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCCTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGGCACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCATGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTTATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCGG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCCCCAGAAGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >PRVABC59 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAACAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACCAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCTGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAAGTTGAGATAACGCCCAATTCACCGAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACTGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTATTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGACCACTTCTCCCTTGGAGTGCTTGTGATCCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGATGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAACGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCCTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATAATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTCTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACCTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGCATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GTCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGCACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGC TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGTATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN augur-24.2.2/tests/functional/refine/data/integer_branch_lengths.json000066400000000000000000000024071456376326500260260ustar00rootroot00000000000000{ "alignment": "refine/aligned.fasta", "generated_by": { "program": "augur", "version": "10.0.2" }, "input_tree": "refine/tree_raw.nwk", "nodes": { "BRA/2016/FC_6706": { "branch_length": 12 }, "COL/FLR_00008/2015": { "branch_length": 5 }, "Colombia/2016/ZC204Se": { "branch_length": 5 }, "DOM/2016/BB_0183": { "branch_length": 24 }, "EcEs062_16": { "branch_length": 18 }, "HND/2016/HU_ME59": { "branch_length": 13 }, "KX369547.1": { "branch_length": 3 }, "NODE_0000000": { "branch_length": 0 }, "NODE_0000001": { "branch_length": 7 }, "NODE_0000002": { "branch_length": 2 }, "NODE_0000003": { "branch_length": 0 }, "NODE_0000004": { "branch_length": 1 }, "NODE_0000005": { "branch_length": 2 }, "NODE_0000006": { "branch_length": 11 }, "NODE_0000007": { "branch_length": 2 }, "NODE_0000008": { "branch_length": 6 }, "PAN/CDC_259359_V1_V3/2015": { "branch_length": 9 }, "PRVABC59": { "branch_length": 22 }, "VEN/UF_1/2016": { "branch_length": 7 }, "ZKC2/2016": { "branch_length": 28 } } }augur-24.2.2/tests/functional/refine/data/metadata.tsv000066400000000000000000000075461456376326500227640ustar00rootroot00000000000000strain virus accession date region country division city db segment authors url title journal paper_url PAN/CDC_259359_V1_V3/2015 zika KX156774 2015-12-18 North America Panama Panama Panama genbank genome Shabman et al https://www.ncbi.nlm.nih.gov/nuccore/KX156774 Direct Submission Submitted (29-APR-2016) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ COL/FLR_00024/2015 zika MF574569 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574569 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ PRVABC59 zika KU501215 2015-12-XX North America Puerto Rico Puerto Rico Puerto Rico genbank genome Lanciotti et al https://www.ncbi.nlm.nih.gov/nuccore/KU501215 Phylogeny of Zika Virus in Western Hemisphere, 2015 Emerging Infect. Dis. 22 (5), 933-935 (2016) https://www.ncbi.nlm.nih.gov/pubmed/27088323 COL/FLR_00008/2015 zika MF574562 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574562 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ Colombia/2016/ZC204Se zika KY317939 2016-01-06 South America Colombia Colombia Colombia genbank genome Quick et al https://www.ncbi.nlm.nih.gov/nuccore/KY317939 Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples Nat Protoc 12 (6), 1261-1276 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538739 ZKC2/2016 zika KX253996 2016-02-16 Oceania American Samoa American Samoa American Samoa genbank genome Wu et al https://www.ncbi.nlm.nih.gov/nuccore/KX253996 Direct Submission Submitted (18-MAY-2016) Center for Diseases Control and Prevention of Guangdong Province; National Institute of Viral Disease Control and Prevention, China https://www.ncbi.nlm.nih.gov/pubmed/ VEN/UF_1/2016 zika KX702400 2016-03-25 South America Venezuela Venezuela Venezuela genbank genome Blohm et al https://www.ncbi.nlm.nih.gov/nuccore/KX702400 Complete Genome Sequences of Identical Zika virus Isolates in a Nursing Mother and Her Infant Genome Announc 5 (17), e00231-17 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28450510 DOM/2016/BB_0059 zika KY785425 2016-04-04 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785425 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 BRA/2016/FC_6706 zika KY785433 2016-04-08 South America Brazil Brazil Brazil genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785433 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 DOM/2016/BB_0183 zika KY785420 2016-04-18 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785420 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 EcEs062_16 zika KX879603 2016-04-XX South America Ecuador Ecuador Ecuador genbank genome Marquez et al https://www.ncbi.nlm.nih.gov/nuccore/KX879603 First Complete Genome Sequences of Zika Virus Isolated from Febrile Patient Sera in Ecuador Genome Announc 5 (8), e01673-16 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28232448 HND/2016/HU_ME59 zika KY785418 2016-05-13 North America Honduras Honduras Honduras genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785418 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 augur-24.2.2/tests/functional/refine/data/mutations_per_site_branch_lengths.json000066400000000000000000000026111456376326500303030ustar00rootroot00000000000000{ "alignment": null, "generated_by": { "program": "augur", "version": "10.0.2" }, "input_tree": "refine/tree_raw.nwk", "nodes": { "BRA/2016/FC_6706": { "branch_length": 0.00119745 }, "COL/FLR_00008/2015": { "branch_length": 0.00046961 }, "Colombia/2016/ZC204Se": { "branch_length": 0.00047184 }, "DOM/2016/BB_0183": { "branch_length": 0.00226698 }, "EcEs062_16": { "branch_length": 0.00167718 }, "HND/2016/HU_ME59": { "branch_length": 0.00125764 }, "KX369547.1": { "branch_length": 0.00027828 }, "NODE_0000000": { "branch_length": 0.001 }, "NODE_0000001": { "branch_length": 0.000651 }, "NODE_0000002": { "branch_length": 0.000184 }, "NODE_0000003": { "branch_length": 2e-06 }, "NODE_0000004": { "branch_length": 9.3e-05 }, "NODE_0000005": { "branch_length": 0.000209 }, "NODE_0000006": { "branch_length": 0.000949 }, "NODE_0000007": { "branch_length": 0.000192 }, "NODE_0000008": { "branch_length": 0.000579 }, "PAN/CDC_259359_V1_V3/2015": { "branch_length": 0.00083922 }, "PRVABC59": { "branch_length": 0.00206996 }, "VEN/UF_1/2016": { "branch_length": 0.00067495 }, "ZKC2/2016": { "branch_length": 0.00260941 } } }augur-24.2.2/tests/functional/refine/data/not_time_tree.nwk000066400000000000000000000010101456376326500240000ustar00rootroot00000000000000(KX369547.1:0.00027828,ZKC2/2016:0.00260941,((EcEs062_16:0.00167718,DOM/2016/BB_0183:0.00226698)NODE_0000002:0.00018400,((HND/2016/HU_ME59:0.00125764,PRVABC59:0.00206996)NODE_0000004:0.00009300,(BRA/2016/FC_6706:0.00119745,(Colombia/2016/ZC204Se:0.00047184,(PAN/CDC_259359_V1_V3/2015:0.00083922,(COL/FLR_00008/2015:0.00046961,VEN/UF_1/2016:0.00067495)NODE_0000008:0.00057900)NODE_0000007:0.00019200)NODE_0000006:0.00094900)NODE_0000005:0.00020900)NODE_0000003:0.00000200)NODE_0000001:0.00065100)NODE_0000000:0.00100000; augur-24.2.2/tests/functional/refine/data/tree.nwk000066400000000000000000000007311456376326500221130ustar00rootroot00000000000000((Colombia/2016/ZC204Se:0.00105368,(PAN/CDC_259359_V1_V3/2015:0.00076051,(COL/FLR_00008/2015:0.00044440,VEN/UF_1/2016:0.00089377)NODE_0000008:0.00038502)NODE_0000007:0.00019253)NODE_0000001:0.00080159,(BRA/2016/FC_6706:0.00214920,(ZKC2/2016:0.00173693,(HND/2016/HU_ME59:0.00206150,PRVABC59:0.00135309)NODE_0000004:0.00013537,(EcEs062_16:0.00175918,DOM/2016/BB_0183:0.00184905)NODE_0000002:0.00021565)NODE_0000003:0.00013737)NODE_0000005:0.00019772)NODE_0000006:0.00100000; augur-24.2.2/tests/functional/refine/data/tree_raw.nwk000066400000000000000000000006341456376326500227660ustar00rootroot00000000000000(KX369547.1:0.00027828,(((BRA/2016/FC_6706:0.00119745,((PAN/CDC_259359_V1_V3/2015:0.00083922,(COL/FLR_00008/2015:0.00046961,VEN/UF_1/2016:0.00067495):0.00057900):0.00019200,Colombia/2016/ZC204Se:0.00047184):0.00094900):0.00020900,(HND/2016/HU_ME59:0.00125764,PRVABC59:0.00206996):0.00009300):0.00000200,(EcEs062_16:0.00167718,DOM/2016/BB_0183:0.00226698):0.00018400):0.00065100,ZKC2/2016:0.00260941):0.00000000; augur-24.2.2/tests/functional/titers/000077500000000000000000000000001456376326500175635ustar00rootroot00000000000000augur-24.2.2/tests/functional/titers/cram/000077500000000000000000000000001456376326500205055ustar00rootroot00000000000000augur-24.2.2/tests/functional/titers/cram/titers-sub-with-tree-and-custom-prefix.t000066400000000000000000000012311456376326500302410ustar00rootroot00000000000000Setup $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../../../bin/augur}" Test titer substitution model with alignment and tree inputs and a custom prefix for the node data attributes in the output. $ ${AUGUR} titers sub \ > --tree ../data/tree.nwk \ > --titers ../data/titers.tsv \ > --alignment ../data/aa_seq_HA1.fasta \ > --gene-names HA1 \ > --attribute-prefix custom_prefix_ \ > --output $TMP/titers-sub.json > /dev/null Read titers from ../data/titers.tsv, found: --- 62 strains --- 15 data sources --- 272 total measurements $ grep custom_prefix_cTiterSub $TMP/titers-sub.json | wc -l \s*120 (re) augur-24.2.2/tests/functional/titers/cram/titers-sub-with-tree.t000066400000000000000000000010421456376326500246760ustar00rootroot00000000000000Setup $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../../../bin/augur}" Test titer substitution model with alignment and tree inputs. $ ${AUGUR} titers sub \ > --tree ../data/tree.nwk \ > --titers ../data/titers.tsv \ > --alignment ../data/aa_seq_HA1.fasta \ > --gene-names HA1 \ > --output $TMP/titers-sub.json > /dev/null Read titers from ../data/titers.tsv, found: --- 62 strains --- 15 data sources --- 272 total measurements $ grep cTiterSub $TMP/titers-sub.json | wc -l \s*120 (re) augur-24.2.2/tests/functional/titers/cram/titers-tree-with-custom-prefix.t000066400000000000000000000010551456376326500267160ustar00rootroot00000000000000Setup $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../../../bin/augur}" Test titer tree model with a custom prefix for the node data attributes in the output. $ ${AUGUR} titers tree \ > --tree ../data/tree.nwk \ > --titers ../data/titers.tsv \ > --attribute-prefix custom_prefix_ \ > --output $TMP/titers-tree.json > /dev/null Read titers from ../data/titers.tsv, found: --- 62 strains --- 15 data sources --- 272 total measurements $ grep custom_prefix_cTiter $TMP/titers-tree.json | wc -l \s*120 (re) augur-24.2.2/tests/functional/titers/cram/titers-tree.t000066400000000000000000000006651456376326500231500ustar00rootroot00000000000000Setup $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../../../bin/augur}" Test titer tree model. $ ${AUGUR} titers tree \ > --tree ../data/tree.nwk \ > --titers ../data/titers.tsv \ > --output $TMP/titers-tree.json > /dev/null Read titers from ../data/titers.tsv, found: --- 62 strains --- 15 data sources --- 272 total measurements $ grep cTiter $TMP/titers-tree.json | wc -l \s*120 (re) augur-24.2.2/tests/functional/titers/data/000077500000000000000000000000001456376326500204745ustar00rootroot00000000000000augur-24.2.2/tests/functional/titers/data/aa_seq_HA1.fasta000066400000000000000000001225121456376326500234010ustar00rootroot00000000000000>NODE_0000055 QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILD GIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIWSRPWVRGLSSRISIYWTIVKPG DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >A/HongKong/1/1968 QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILD GIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIWSRPWVRGLSSRISIYWTIVKPG DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >NODE_0000016 QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILD GINCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >A/Bilthoven/16190/1968 QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILD GINCTLIDALLGDPHCDVFQDETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >NODE_0000015 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD GINCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >A/Bilthoven/93/1970 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD GVNCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGQSSRISIYWTIVKPG DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >NODE_0000014 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD GIDCTLIDALLGDPHCDGFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFTWTGVTQNGGSNACKRGPDSGFFSRLNWLYKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTNQEQTSLYVQASGRVTVSTKRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >A/England/42/1972 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD GIDCTLIDALLGDPHCDGFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFTWTGVTQNGGSNACKRGPDSGFFSRLNWLYKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTNQEQTSLYVQASGRVTVSTKGSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >NODE_0000013 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD GIDCTLIDALLGDPHCDGFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFTWTGVTQNGGSNACKRGPDSGFFSRLNWLYKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTDQEQTSLYVQASGRVTVSTKRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >A/Bilthoven/5146/1974 QNFPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD GIDCTLIDALLGDPHCDGFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFTWTGVTQNGGSNACKRGPDIGFFSRLNWLYKSGNTYPVLNVSMPNNDNFDKLYIW GVHHPSTDQEQTSLYVQASGRVTVSTKRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG DILVINSNGNLIAPRGYFKMRTGKSSIMRSDASIGTCISECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >NODE_0000011 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQNGGSNACKRGPDSGFFSRLNWLYKSGSTYPVLNVTMPNNDNFDKLYIW GVHHPSTDKEQTNLYVQASGRVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >NODE_0000012 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQNGGSSACKRGPDSGFFSRLNWLYKSGSTYPVQNVTMPNNDNSDKLYIW GVHHPSTDKEQTNLYVQASGKVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >NODE_0000010 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICNNPHRILD GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQNGGSYACKRGPDNGFFSRLNWLYKSESTYPVLNVTMPNNDNFDKLYIW GVHHPSTDKEQTNLYVQASGRVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG DILVINSNGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >A/Bilthoven/5168/1976 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICDNPHRILD GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQNGGSSACKRGPDNGFFSRLNWLYKSGSTYPVQNVTMPNNDNSDKLYIW GVHHPSTDKEQTDLYVQASGKVTVSTKRSQQTVIPNVGSRPWVRGLSSRVSIYWTIVKPG DILIINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >A/Victoria/3/1975 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQNGGSSACKRGPDSGFFSRLNWLYKSGSTYPVQNVTMPNNDNSDKLYIW GVHHPSTDKEQTNLYVQASGKVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >A/Bilthoven/2271/1976 QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICNNPHRILD GINCTLIDALLGDPHCDGFQNKKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQNGGSYACKRGPDNGFFSRLNWLYKSESTYPVLNVTMPNNDNFDKLYIW GVHHPSTDKEQTNLYVQASGRVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG DILVINSNGNLIAPRGYFKIRNGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPKYVKQNTLKLATGMRNVPEKQTR >NODE_0000008 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQSGGSYACKRGSVNSFFSRLNWLYESEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDKEQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000009 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNEKWDLFIERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQSGGSYACKRGSVNSFFSRLNWLYESEYKYPALNVTMPNNGKFDKLYIW GVHHPSTEKEQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000007 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNEKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVTQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDREQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/ChristChurch/2/1988 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNEKWDLFIERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQNGGSYACKRGSVNSFFSRLNWLYESEYKYPALNVTMPNNGKFDKLYIW GVHHPITEKEQTNLYVRASGRVTVSTKRSQQTRIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPRYGKQNTLKLATGMRNVPEKQTR >A/Leningrad/360/1986 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNEKWDLFIERSKAFSNCYPYDVPDYASLRSLVASSGTLEF INEGFNWTGVTQSGGSYTCKRGSVNSFFSRLNWLYESEYKYPALNVTMPNNGKFDKLYIW GVHHPSTEKEQTNLYVRASGRVTVSTKRSQQTVIPNIGSSPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Victoria/7/1987 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNEKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVTQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDREQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000006 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDREQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Seoul/1/1990 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDREQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000004 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDREQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000005 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TNEDFNWTGVAQSGESYACKRGSVKSFFSRLNWLHESDYKYPALNVTMPNNGKFDKLYIW GVHHPSTDREQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000003 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/SouthAustralia/23/1992 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TNEDFNWTGVAQSGESYACKRGSVKSFFSRLNWLHESDYKYPALNVTMPNNGKFDKLYIW GVHHPSTDREQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/SouthAustralia/27/1992 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TNEDFNWTGVAQSGESYACKRGSVKSFFSRLNWLHESDYKYPALNVTMPNNGKFDKLYIW GVHHPSTDREQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000002 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000017 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Oslo/2352/1993 QKIPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPNCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TNEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000000 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Madrid/G130/1993 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDVPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000001 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGQSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Shiga/6/1993 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGQSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Yamagata/62/1993 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGQSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Netherlands/115/1993 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKISQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000018 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000019 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGQSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000022 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TNEGFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Netherlands/371/1993 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INEDFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVATKRSQQTVIPNIGFRPWVRGQSSGISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000020 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSPTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INENFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPDIGYRPWVRGQSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Johannesburg/47/1994 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQNSPTGRICDSPHRILD GKNCTLIDALLGDPHCDGLQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INENFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPDIGYRPWVRGQSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKLRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGPCPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000021 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSPTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INENFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPDIGYRPWVRGQSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/HongKong/55/1994 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSPTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INENFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPDIGYRPWVRGLSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Johannesburg/33/1994 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSPTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF INENFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPDIGYRPWVRGQSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/HongKong/32/1995 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TNEGFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000023 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TKEGFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000024 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Geneva/AI9509/1995 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TKEGFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/HongKong/38/1995 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TKEGFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCKSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Wuhan/359/1995 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSIYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000025 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000026 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSTAYSNCYPYDVPDYASLRSLVASSGTLEF TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIDNCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000027 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVAQNGTSYACKRRSIKSFFSRLNWLHQLKYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/HongKong/280/1997 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFQNKEWDLFVERSTAYSNCYPYDVPDYASLRSLVASSGTLEF TNEGFNWTGVAQDGTSYACKRRSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVHASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIDNCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Oslo/244/1997 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GKNCTLIDALLGDPHCDGFKNKEWDLFVERSTAYSNCYPYDVPDYASLRSLVASSGTLEF TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIDNCNSECITPNGSIPNDKPFQNVNRI TYGPCPRYVKQNTLKLATGMRNVPEKQTR >A/Netherlands/414/1998 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVQDYASLRSLVASSGTLEF NNESFNWTGVAQNGTSYACKRRSIKSFFSRLNWLHQLKYKYPALNVTMPNNDKFDKLYIW GVHHPSTDSDQTSLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNNLKLATGMRNVPEKQTR >NODE_0000028 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPSTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Philippines/1159050/2002 QKLPGNDNSTATLCLGHHAVSNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRGSNKSFFSRLNWLHQLKDKYPALNVTMPNNEKFDKLYIW GVLHPSTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000029 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000030 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYVSLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000033 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPHCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/SouthAustralia/102/2001 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYVSLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000031 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYVSLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSDKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Victoria/102/2003 QKLPGNDNSMATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYVSLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSDKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIDKCNSECITPNGSIPNDKPFQNVNRI TYGLCPRYVKQNTLKLATGMLNVPEKQNR >NODE_0000032 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYVSLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSDKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/NewCaledonia/6/2002 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYVSLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSDKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG DILLINSTGNLIAPRGYYKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Sofia/141/2003 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTSRICDSPHQILD GENCTLIDALLGDPHCDGFQNKEWDLFVERSKTYSNCYPYDVPDYVSLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSDKSFFSRLNWLHQLRYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQIRIYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIHWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQKTLKLATGMRNVPEKQTR >NODE_0000034 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPHCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000035 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPHCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Brisbane/6/2002 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPHCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/HongKong/1550/2002 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPHCDGFQNKKWDLFVERSKAYSSCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPVTDSDQISIYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Brisbane/5/2002 QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPHCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000036 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Cheonnam/432/2002 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQTSLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000037 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Auckland/6/2003 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVVPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Wyoming/2/2003 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWAGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000038 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFDWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000040 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Brisbane/7/2003 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFDWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000039 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFDWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Louisiana/4/2003 QKLPGNDNSTATLCLGHHAVPNGTIVKTITDDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFDWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYIKQNTLKLATGMRNVPEKQTR >A/Texas/40/2003 QKLPGNDNSTATLCLGHHAAPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFDWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Fujian/445/2003 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPVTDSDQINLYAQASGRITVSTKRSQQTVIPNIGYRPRVRDIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000041 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Singapore/95/2003 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKYKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000042 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Wellington/1/2004 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNKSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQINLYVQASGRITVSTKRSQQTVIPNIGSRPRVRDVPSRISIYWTIVKPG DILLISSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000043 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Lyon/108/2005 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRISNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPG DILLVNSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000044 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLIASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEEFDKLYIW GVHHPGTDNDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000045 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Singapore/38/2005 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLIASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEEFDKLYIW GVHHPGTDNDQISLYAQASGRITVSTRRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Brisbane/3/2005 QKLPGNDNSTATLCIGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLIASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEEFDKLYIW GVHHPGTDNDQISLYAQASGKITVSTKRSQQTVIPNIGSRPRVRDIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/California/20/2005 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSSCKRRSNNSFFSRLNWLTRLKFKYPALNVTMPNNEKFDKLYIW GVHHPVTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Singapore/35/2005 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLRFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNISSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Singapore/70/2005 QKLPGNDNSTATLCLGHHAVPNGTIVKTITSDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYAFLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Taiwan/83/2006 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000046 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000047 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHSKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000048 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Singapore/57/2006 LKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTHSKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Nepal/921/2006 QKLPGIDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWAGVTQNGTSSACKRGSNNSFFSRLNWLTHSKFKYPALNVTMPNNEEFDKLYIW GVLHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Brisbane/9/2006 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACKRRSNNSFFSRLNWLTQLKFKYPALNVTMPNNEKFDKLYIW GVHHPVTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000049 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000050 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000051 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEQFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Uruguay/716/2007 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSSCIRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIW GVHHPGTDNDQIFPYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Wisconsin/3/2007 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLKFKYPALNVTMPNNEEFDKLYIW GVHHPVTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGFRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000052 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLRFKYPALNVTMPNNEQFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >NODE_0000053 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/England/392/2008 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLRFKYPALNVTMPNNEQFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/England/394/2008 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVSDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLRFKYPALNVTMPNNEQFDKLYIW GVHHPGTDNDQIFLYAQASGRITVSTKRSQQTVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/RhodeIsland/1/2010 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSAGEICDSPHQILD GENCTLIDALLGDPQCDGFQNKKWDLFVERSRAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSNNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVLHPGTYKDQIFLYAQASGRITVSTKRSQQAVIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQSTLKLATGMRNVPEKQTR >NODE_0000054 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GKNCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSKNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFPYAQASGRITVSTKRSQQTAIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/HongKong/26560/2009 QKIPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GKNCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSKNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFPYAQASGRITVSTKRSQQTAIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSGCITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR >A/Wisconsin/15/2009 QKLPGNDNSTATLCLGHHAVPNGTIVKTITNDQIEVTNATELVQSSSTGEICDSPHQILD GKNCTLIDALLGDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF NNESFNWTGVTQNGTSSACIRRSKNSFFSRLNWLTHLNFKYPALNVTMPNNEQFDKLYIW GVHHPGTDKDQIFPYAQASGRITVSTKRSQQTAIPNIGSRPRVRNIPSRISIYWTIVKPG DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI TYGACPRYVKQNTLKLATGMRNVPEKQTR augur-24.2.2/tests/functional/titers/data/titers.tsv000066400000000000000000000501341456376326500225470ustar00rootroot00000000000000virus_strain serum_strain serum_id source titer A/Wisconsin/3/2007 A/Wisconsin/3/2007 A/Wis3/07 Barr2010 5120 A/Wisconsin/3/2007 A/Uruguay/716/2007 A/Uru716/07 Barr2010 5120 A/Wisconsin/3/2007 A/England/394/2008 A/Eng394/08 Barr2010 1280 A/Uruguay/716/2007 A/Wisconsin/3/2007 A/Wis3/07 Barr2010 640 A/Uruguay/716/2007 A/Uruguay/716/2007 A/Uru716/07 Barr2010 5120 A/Uruguay/716/2007 A/England/394/2008 A/Eng394/08 Barr2010 320 A/England/394/2008 A/Wisconsin/3/2007 A/Wis3/07 Barr2010 320 A/England/394/2008 A/Uruguay/716/2007 A/Uru716/07 Barr2010 320 A/England/394/2008 A/England/394/2008 A/Eng394/08 Barr2010 640 A/Uruguay/716/2007 A/Uruguay/716/2007 UY/716 Cox2011 640 A/Uruguay/716/2007 A/RhodeIsland/1/2010 RI/1 Cox2011 320 A/Uruguay/716/2007 A/RhodeIsland/1/2010 RI/1 Cox2011 80 A/RhodeIsland/1/2010 A/Uruguay/716/2007 UY/716 Cox2011 10 A/RhodeIsland/1/2010 A/RhodeIsland/1/2010 RI/1 Cox2011 640 A/RhodeIsland/1/2010 A/RhodeIsland/1/2010 RI/1 Cox2011 80 A/RhodeIsland/1/2010 A/Uruguay/716/2007 UY/716 Cox2011 40 A/RhodeIsland/1/2010 A/RhodeIsland/1/2010 RI/1 Cox2011 320 A/RhodeIsland/1/2010 A/RhodeIsland/1/2010 RI/1 Cox2011 160 A/HongKong/1/1968 A/HongKong/1/1968 A/HK/1/68 Hay2001 1280 A/HongKong/1/1968 A/England/42/1972 A/Eng/42/72 Hay2001 320 A/HongKong/1/1968 A/Victoria/3/1975 A/Vic/3/75 Hay2001 <40 A/HongKong/1/1968 A/Johannesburg/33/1994 A/Jhb/33/94 Hay2001 <40 A/HongKong/1/1968 A/Wuhan/359/1995 A/Wuh/359/95 Hay2001 <40 A/England/42/1972 A/HongKong/1/1968 A/HK/1/68 Hay2001 40 A/England/42/1972 A/England/42/1972 A/Eng/42/72 Hay2001 640 A/England/42/1972 A/Victoria/3/1975 A/Vic/3/75 Hay2001 40 A/England/42/1972 A/Johannesburg/33/1994 A/Jhb/33/94 Hay2001 <40 A/England/42/1972 A/Wuhan/359/1995 A/Wuh/359/95 Hay2001 <40 A/Victoria/3/1975 A/HongKong/1/1968 A/HK/1/68 Hay2001 <40 A/Victoria/3/1975 A/England/42/1972 A/Eng/42/72 Hay2001 <40 A/Victoria/3/1975 A/Victoria/3/1975 A/Vic/3/75 Hay2001 640 A/Victoria/3/1975 A/Johannesburg/33/1994 A/Jhb/33/94 Hay2001 <40 A/Victoria/3/1975 A/Wuhan/359/1995 A/Wuh/359/95 Hay2001 <40 A/Johannesburg/33/1994 A/HongKong/1/1968 A/HK/1/68 Hay2001 <40 A/Johannesburg/33/1994 A/England/42/1972 A/Eng/42/72 Hay2001 <40 A/Johannesburg/33/1994 A/Victoria/3/1975 A/Vic/3/75 Hay2001 <40 A/Johannesburg/33/1994 A/Johannesburg/33/1994 A/Jhb/33/94 Hay2001 640 A/Johannesburg/33/1994 A/Wuhan/359/1995 A/Wuh/359/95 Hay2001 80 A/Wuhan/359/1995 A/HongKong/1/1968 A/HK/1/68 Hay2001 <40 A/Wuhan/359/1995 A/England/42/1972 A/Eng/42/72 Hay2001 <40 A/Wuhan/359/1995 A/Victoria/3/1975 A/Vic/3/75 Hay2001 <40 A/Wuhan/359/1995 A/Johannesburg/33/1994 A/Jhb/33/94 Hay2001 40 A/Wuhan/359/1995 A/Wuhan/359/1995 A/Wuh/359/95 Hay2001 1280 A/Fujian/445/2003 A/Texas/40/2003 TEXAS/40-LOT-2004-029/2003-CDC Russell2008 1512 A/Fujian/445/2003 A/Fujian/445/2003 FUJIAN/445-LOT-2004-043/2003-CDC Russell2008 800 A/Fujian/445/2003 A/Louisiana/4/2003 LOUISIANA/4-LOT-2004-12/2003-CDC Russell2008 1440 A/Fujian/445/2003 A/Fujian/445/2003 FUJIAN/445-LOT-2004-043-NEW/2003-CDC Russell2008 640 A/Fujian/445/2003 A/Sofia/141/2003 SOFIA/141-LOT-2003-99/2003-CDC Russell2008 1280 A/Taiwan/83/2006 A/Brisbane/3/2005 BRISBANE/3/2005-MELB Russell2008 80 A/Taiwan/83/2006 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 320 A/Taiwan/83/2006 A/Wellington/1/2004 WELLINGTON/1-NO-2/2004-NIID Russell2008 320 A/Sofia/141/2003 A/Texas/40/2003 TEXAS/40-LOT-2004-029/2003-CDC Russell2008 20 A/Sofia/141/2003 A/Louisiana/4/2003 LOUISIANA/4-LOT-2004-12/2003-CDC Russell2008 12 A/Sofia/141/2003 A/Sofia/141/2003 SOFIA/141-LOT-2003-99/2003-CDC Russell2008 457 A/Sofia/141/2003 A/Louisiana/4/2003 LOUISIANA/4-LOT-2003-12-NEW/2003-CDC Russell2008 10 A/Sofia/141/2003 A/Sofia/141/2003 SOFIA/141-LOT-2003-99-NEW/2003-CDC Russell2008 160 A/Lyon/108/2005 A/Wellington/1/2004 WELLINGTON/1-LOT-2004-093/2004-CDC Russell2008 40 A/Lyon/108/2005 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 160 A/Auckland/6/2003 A/Sofia/141/2003 SOFIA/141-LOT-2003-99-NEW/2003-CDC Russell2008 480 A/Auckland/6/2003 A/Auckland/6/2003 AUCKLAND/6/2003-MELB Russell2008 373 A/Auckland/6/2003 A/Wellington/1/2004 WELLINGTON/1-IVR-139/2004-MELB Russell2008 640 A/Auckland/6/2003 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 640 A/Wellington/1/2004 A/Wellington/1/2004 WELLINGTON/1-LOT-2004-093/2004-CDC Russell2008 640 A/Wellington/1/2004 A/Wellington/1/2004 WELLINGTON/1-X-PR-8-LOT-2005-019/2004-CDC Russell2008 1920 A/Wellington/1/2004 A/Texas/40/2003 TEXAS/40/2003-CDC Russell2008 640 A/Wellington/1/2004 A/Wellington/1/2004 WELLINGTON/1-CDC-20040908-COL-12/2004-CDC Russell2008 640 A/Wellington/1/2004 A/Wellington/1/2004 WELLINGTON/1/2004-CDC Russell2008 533 A/Wellington/1/2004 A/Auckland/6/2003 AUCKLAND/6/2003-MELB Russell2008 80 A/Wellington/1/2004 A/Brisbane/3/2005 BRISBANE/3/2005-MELB Russell2008 165 A/Wellington/1/2004 A/Brisbane/9/2006 BRISBANE/9/2006-MELB Russell2008 224 A/Wellington/1/2004 A/Wellington/1/2004 WELLINGTON/1-IVR-139/2004-MELB Russell2008 1600 A/Wellington/1/2004 A/Wellington/1/2004 WELLINGTON/1-MELB-20040922-COL-11/2004-MELB Russell2008 1280 A/Wellington/1/2004 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 1374 A/Wellington/1/2004 A/HongKong/1550/2002 HONG-KONG/1550/2002-NIID Russell2008 1280 A/Wellington/1/2004 A/Wellington/1/2004 WELLINGTON/1-NO-2/2004-NIID Russell2008 1427 A/Wellington/1/2004 A/Wellington/1/2004 WELLINGTON/1/2004-NIID Russell2008 853 A/Brisbane/5/2002 A/Brisbane/6/2002 BRISBANE/6/2002-MELB Russell2008 160 A/Brisbane/5/2002 A/HongKong/1550/2002 HONG-KONG/1550/2002-MELB Russell2008 160 A/Brisbane/6/2002 A/Brisbane/6/2002 BRISBANE/6/2002-MELB Russell2008 3646 A/Brisbane/6/2002 A/HongKong/1550/2002 HONG-KONG/1550/2002-MELB Russell2008 1318 A/NewCaledonia/6/2002 A/Brisbane/6/2002 BRISBANE/6/2002-MELB Russell2008 288 A/NewCaledonia/6/2002 A/HongKong/1550/2002 HONG-KONG/1550/2002-MELB Russell2008 400 A/Brisbane/7/2003 A/Sofia/141/2003 SOFIA/141-LOT-2003-99-NEW/2003-CDC Russell2008 320 A/Brisbane/3/2005 A/Brisbane/3/2005 BRISBANE/3/2005-MELB Russell2008 966 A/Brisbane/3/2005 A/Brisbane/9/2006 BRISBANE/9/2006-MELB Russell2008 160 A/Brisbane/3/2005 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 652 A/Brisbane/3/2005 A/Wellington/1/2004 WELLINGTON/1-NO-2/2004-NIID Russell2008 1280 A/Brisbane/9/2006 A/Brisbane/9/2006 BRISBANE/9-LOT-2007-069/2006-CDC Russell2008 290 A/Brisbane/9/2006 A/Nepal/921/2006 NEPAL/921-X-PR8-X-165-LOT-2007-074/2006-CDC Russell2008 280 A/Brisbane/9/2006 A/Wisconsin/3/2007 WISCONSIN/3-LOT-2007-089-AND-2007-090-POOL/2007-CDC Russell2008 800 A/Brisbane/9/2006 A/Nepal/921/2006 NEPAL/921-X-PR8-X-165-LOT-2007-103-NEW/2006-CDC Russell2008 320 A/Brisbane/9/2006 A/Wisconsin/3/2007 WISCONSIN/3-LOT-2007-089-NEW/2007-CDC Russell2008 320 A/Brisbane/9/2006 A/Wisconsin/3/2007 WISCONSIN/3-LOT-2007-090-NEW/2007-CDC Russell2008 160 A/Brisbane/9/2006 A/Nepal/921/2006 NEPAL/921-X-PR8-X-165-LOT-2007-074-NEW/2006-CDC Russell2008 160 A/Brisbane/9/2006 A/Brisbane/9/2006 BRISBANE/9-LOT-2007-069-NEW/2006-CDC Russell2008 640 A/Brisbane/9/2006 A/Wisconsin/3/2007 WISCONSIN/3-X-PR8-X-167-LOT-2007-109-NEW/2007-CDC Russell2008 320 A/Brisbane/9/2006 A/Wisconsin/3/2007 WISCONSIN/3-X-PR8-X-167-LOT-2007-110-NEW/2007-CDC Russell2008 320 A/Brisbane/9/2006 A/Wisconsin/3/2007 WISCONSIN/3-X-PR8-X-167-LOT-2007-110/2007-CDC Russell2008 320 A/Brisbane/9/2006 A/Brisbane/3/2005 BRISBANE/3/2005-MELB Russell2008 53 A/Brisbane/9/2006 A/Brisbane/9/2006 BRISBANE/9/2006-MELB Russell2008 1005 A/Brisbane/9/2006 A/Nepal/921/2006 NEPAL/921/2006-MELB Russell2008 192 A/Brisbane/9/2006 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 131 A/Wyoming/2/2003 A/HongKong/1550/2002 HONG-KONG/1550-LOT-2002-26/2002-CDC Russell2008 320 A/Nepal/921/2006 A/Brisbane/9/2006 BRISBANE/9-LOT-2007-069/2006-CDC Russell2008 261 A/Nepal/921/2006 A/Nepal/921/2006 NEPAL/921-X-PR8-X-165-LOT-2007-074/2006-CDC Russell2008 190 A/Nepal/921/2006 A/Wisconsin/3/2007 WISCONSIN/3-LOT-2007-089-AND-2007-090-POOL/2007-CDC Russell2008 586 A/Nepal/921/2006 A/Nepal/921/2006 NEPAL/921-X-PR8-X-165-LOT-2007-103-NEW/2006-CDC Russell2008 80 A/Nepal/921/2006 A/Wisconsin/3/2007 WISCONSIN/3-LOT-2007-089-NEW/2007-CDC Russell2008 160 A/Nepal/921/2006 A/Wisconsin/3/2007 WISCONSIN/3-LOT-2007-090-NEW/2007-CDC Russell2008 640 A/Nepal/921/2006 A/Nepal/921/2006 NEPAL/921-X-PR8-X-165-LOT-2007-074-NEW/2006-CDC Russell2008 160 A/Nepal/921/2006 A/Brisbane/9/2006 BRISBANE/9-LOT-2007-069-NEW/2006-CDC Russell2008 320 A/Nepal/921/2006 A/Wisconsin/3/2007 WISCONSIN/3-X-PR8-X-167-LOT-2007-109-NEW/2007-CDC Russell2008 80 A/Nepal/921/2006 A/Wisconsin/3/2007 WISCONSIN/3-X-PR8-X-167-LOT-2007-110-NEW/2007-CDC Russell2008 240 A/Nepal/921/2006 A/Wisconsin/3/2007 WISCONSIN/3-X-PR8-X-167-LOT-2007-110/2007-CDC Russell2008 160 A/Nepal/921/2006 A/Brisbane/9/2006 BRISBANE/9/2006-MELB Russell2008 663 A/Nepal/921/2006 A/Nepal/921/2006 NEPAL/921/2006-MELB Russell2008 503 A/Nepal/921/2006 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 166 A/Nepal/921/2006 A/Nepal/921/2006 NEPAL/921-NO-1/2006-NIID Russell2008 576 A/Nepal/921/2006 A/Nepal/921/2006 NEPAL/921/2006-NIID Russell2008 640 A/Victoria/102/2003 A/Brisbane/6/2002 BRISBANE/6/2002-MELB Russell2008 2560 A/Victoria/102/2003 A/HongKong/1550/2002 HONG-KONG/1550/2002-MELB Russell2008 320 A/HongKong/1550/2002 A/HongKong/1550/2002 HONG-KONG/1550-LOT-2002-26/2002-CDC Russell2008 832 A/HongKong/1550/2002 A/Brisbane/6/2002 BRISBANE/6/2002-MELB Russell2008 5280 A/HongKong/1550/2002 A/HongKong/1550/2002 HONG-KONG/1550/2002-MELB Russell2008 2066 A/Cheonnam/432/2002 A/HongKong/1550/2002 HONG-KONG/1550-LOT-2002-26/2002-CDC Russell2008 240 A/Singapore/95/2003 A/Texas/40/2003 TEXAS/40-LOT-2004-029/2003-CDC Russell2008 1280 A/Singapore/95/2003 A/Louisiana/4/2003 LOUISIANA/4-LOT-2004-12/2003-CDC Russell2008 1280 A/Singapore/35/2005 A/Wellington/1/2004 WELLINGTON/1-LOT-2004-093/2004-CDC Russell2008 10 A/Singapore/35/2005 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 80 A/Singapore/38/2005 A/Wellington/1/2004 WELLINGTON/1-LOT-2004-093/2004-CDC Russell2008 10 A/Singapore/38/2005 A/Brisbane/3/2005 BRISBANE/3/2005-MELB Russell2008 80 A/Singapore/38/2005 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 160 A/Singapore/70/2005 A/California/20/2005 CALIFORNIA/20-LOT-2006-050-NEW/2005-CDC Russell2008 640 A/Singapore/70/2005 A/Brisbane/3/2005 BRISBANE/3/2005-MELB Russell2008 40 A/Singapore/70/2005 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 80 A/Singapore/57/2006 A/Brisbane/3/2005 BRISBANE/3/2005-MELB Russell2008 80 A/Singapore/57/2006 A/Wellington/1/2004 WELLINGTON/1/2004-MELB Russell2008 160 A/Philippines/1159050/2002 A/HongKong/1550/2002 HONG-KONG/1550-LOT-2002-26/2002-CDC Russell2008 80 A/Louisiana/4/2003 A/Texas/40/2003 TEXAS/40-LOT-2004-029/2003-CDC Russell2008 1066 A/Louisiana/4/2003 A/Fujian/445/2003 FUJIAN/445-LOT-2004-043/2003-CDC Russell2008 266 A/Louisiana/4/2003 A/Louisiana/4/2003 LOUISIANA/4-LOT-2004-12/2003-CDC Russell2008 773 A/Louisiana/4/2003 A/Fujian/445/2003 FUJIAN/445-LOT-2004-043-NEW/2003-CDC Russell2008 320 A/Louisiana/4/2003 A/Sofia/141/2003 SOFIA/141-LOT-2003-99/2003-CDC Russell2008 580 A/Louisiana/4/2003 A/Louisiana/4/2003 LOUISIANA/4-LOT-2003-12-NEW/2003-CDC Russell2008 320 A/Texas/40/2003 A/Wellington/1/2004 WELLINGTON/1-LOT-2004-093/2004-CDC Russell2008 248 A/Texas/40/2003 A/Texas/40/2003 TEXAS/40-LOT-2004-029/2003-CDC Russell2008 1715 A/Texas/40/2003 A/Wellington/1/2004 WELLINGTON/1-X-PR-8-LOT-2005-019/2004-CDC Russell2008 480 A/Texas/40/2003 A/Texas/40/2003 TEXAS/40/2003-CDC Russell2008 2560 A/Texas/40/2003 A/Wellington/1/2004 WELLINGTON/1-CDC-20040908-COL-12/2004-CDC Russell2008 1280 A/Texas/40/2003 A/Wellington/1/2004 WELLINGTON/1/2004-CDC Russell2008 1066 A/Texas/40/2003 A/Fujian/445/2003 FUJIAN/445-LOT-2004-043/2003-CDC Russell2008 400 A/Texas/40/2003 A/Louisiana/4/2003 LOUISIANA/4-LOT-2004-12/2003-CDC Russell2008 1280 A/Texas/40/2003 A/HongKong/1550/2002 HONG-KONG/1550/2002-NIID Russell2008 1280 A/California/20/2005 A/California/20/2005 CALIFORNIA/20-LOT-2006-050-NEW/2005-CDC Russell2008 640 A/Bilthoven/16190/1968 A/HongKong/1/1968 HK/1/68 Smith2004 640 A/Bilthoven/16190/1968 A/England/42/1972 EN/42/72 Smith2004 320 A/Bilthoven/16190/1968 A/Victoria/3/1975 VI/3A/75 Smith2004 40 A/HongKong/1/1968 A/HongKong/1/1968 HK/1/68 Smith2004 1280 A/HongKong/1/1968 A/England/42/1972 EN/42/72 Smith2004 2560 A/HongKong/1/1968 A/Leningrad/360/1986 LE/360/86 Smith2004 <10 A/HongKong/1/1968 A/Johannesburg/33/1994 JO/33/94 Smith2004 <10 A/HongKong/1/1968 A/Victoria/3/1975 VI/3C/75 Smith2004 <10 A/Bilthoven/93/1970 A/HongKong/1/1968 HK/1/68 Smith2004 1109 A/Bilthoven/93/1970 A/England/42/1972 EN/42/72 Smith2004 640 A/Bilthoven/93/1970 A/Victoria/3/1975 VI/3A/75 Smith2004 46 A/Bilthoven/93/1970 A/Leningrad/360/1986 LE/360/86 Smith2004 <10 A/Bilthoven/93/1970 A/Victoria/7/1987 VI/7/87 Smith2004 <20 A/Bilthoven/93/1970 A/Victoria/3/1975 VI/3C/75 Smith2004 <20 A/England/42/1972 A/England/42/1972 EN/42/72 Smith2004 5120 A/England/42/1972 A/Leningrad/360/1986 LE/360/86 Smith2004 <10 A/England/42/1972 A/Johannesburg/33/1994 JO/33/94 Smith2004 <10 A/England/42/1972 A/Victoria/3/1975 VI/3C/75 Smith2004 160 A/Bilthoven/5146/1974 A/HongKong/1/1968 HK/1/68 Smith2004 40 A/Bilthoven/5146/1974 A/England/42/1972 EN/42/72 Smith2004 320 A/Bilthoven/5146/1974 A/Victoria/3/1975 VI/3A/75 Smith2004 80 A/Victoria/3/1975 A/England/42/1972 EN/42/72 Smith2004 320 A/Victoria/3/1975 A/Leningrad/360/1986 LE/360/86 Smith2004 40 A/Victoria/3/1975 A/Johannesburg/33/1994 JO/33/94 Smith2004 <10 A/Victoria/3/1975 A/Victoria/3/1975 VI/3C/75 Smith2004 2560 A/Bilthoven/5168/1976 A/HongKong/1/1968 HK/1/68 Smith2004 <10 A/Bilthoven/5168/1976 A/England/42/1972 EN/42/72 Smith2004 160 A/Bilthoven/5168/1976 A/Victoria/3/1975 VI/3A/75 Smith2004 1280 A/Bilthoven/2271/1976 A/HongKong/1/1968 HK/1/68 Smith2004 <10 A/Bilthoven/2271/1976 A/England/42/1972 EN/42/72 Smith2004 120 A/Bilthoven/2271/1976 A/Victoria/3/1975 VI/3A/75 Smith2004 160 A/Leningrad/360/1986 A/England/42/1972 EN/42/72 Smith2004 <10 A/Leningrad/360/1986 A/Leningrad/360/1986 LE/360/86 Smith2004 640 A/Leningrad/360/1986 A/Victoria/7/1987 VI/7/87 Smith2004 160 A/Leningrad/360/1986 A/Victoria/3/1975 VI/3C/75 Smith2004 <10 A/Victoria/7/1987 A/Victoria/7/1987 VI/7/87 Smith2004 1437 A/ChristChurch/2/1988 A/Victoria/7/1987 VI/7/87 Smith2004 320 A/Seoul/1/1990 A/Victoria/7/1987 VI/7/87 Smith2004 1280 A/SouthAustralia/23/1992 A/Johannesburg/33/1994 JO/33/94 Smith2004 <5 A/SouthAustralia/27/1992 A/Johannesburg/33/1994 JO/33/94 Smith2004 20 A/Madrid/G130/1993 A/Johannesburg/33/1994 JO/33/94 Smith2004 240 A/Netherlands/115/1993 A/Johannesburg/33/1994 JO/33/94 Smith2004 240 A/Shiga/6/1993 A/Johannesburg/33/1994 JO/33/94 Smith2004 400 A/Yamagata/62/1993 A/Johannesburg/33/1994 JO/33/94 Smith2004 200 A/Netherlands/371/1993 A/Johannesburg/33/1994 JO/33/94 Smith2004 1120 A/Oslo/2352/1993 A/Oslo/2352/1993 OS/2352/93 Smith2004 1280 A/Oslo/2352/1993 A/Johannesburg/33/1994 JO/33/94 Smith2004 315 A/HongKong/55/1994 A/Oslo/2352/1993 OS/2352/93 Smith2004 1280 A/HongKong/55/1994 A/Johannesburg/33/1994 JO/33/94 Smith2004 2326 A/Johannesburg/33/1994 A/HongKong/1/1968 HK/1/68 Smith2004 <10 A/Johannesburg/33/1994 A/England/42/1972 EN/42/72 Smith2004 <10 A/Johannesburg/33/1994 A/Leningrad/360/1986 LE/360/86 Smith2004 <10 A/Johannesburg/33/1994 A/Oslo/2352/1993 OS/2352/93 Smith2004 298 A/Johannesburg/33/1994 A/Geneva/AI9509/1995 GE/A9509/95 Smith2004 640 A/Johannesburg/33/1994 A/Victoria/3/1975 VI/3C/75 Smith2004 <10 A/Johannesburg/47/1994 A/Oslo/2352/1993 OS/2352/93 Smith2004 320 A/Johannesburg/47/1994 A/Johannesburg/33/1994 JO/33/94 Smith2004 1358 A/Geneva/AI9509/1995 A/Oslo/2352/1993 OS/2352/93 Smith2004 226 A/Geneva/AI9509/1995 A/Johannesburg/33/1994 JO/33/94 Smith2004 342 A/Geneva/AI9509/1995 A/Geneva/AI9509/1995 GE/A9509/95 Smith2004 1280 A/HongKong/32/1995 A/Oslo/2352/1993 OS/2352/93 Smith2004 1810 A/HongKong/32/1995 A/Johannesburg/33/1994 JO/33/94 Smith2004 3225 A/HongKong/38/1995 A/Johannesburg/33/1994 JO/33/94 Smith2004 1280 A/HongKong/38/1995 A/Geneva/AI9509/1995 GE/A9509/95 Smith2004 2560 A/Wuhan/359/1995 A/Johannesburg/33/1994 JO/33/94 Smith2004 207 A/Wuhan/359/1995 A/Geneva/AI9509/1995 GE/A9509/95 Smith2004 370 A/Wuhan/359/1995 A/Wuhan/359/1995 WU/359B/95 Smith2004 2560 A/Oslo/244/1997 A/Johannesburg/33/1994 JO/33/94 Smith2004 240 A/Netherlands/414/1998 A/HongKong/1/1968 HK/1/68 Smith2004 <10 A/Netherlands/414/1998 A/Wuhan/359/1995 WU/359B/95 Smith2004 320 A/Wisconsin/3/2007 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-feb-2009-table5 2560 A/Wisconsin/3/2007 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2009-table5 5120 A/Wisconsin/3/2007 A/England/394/2008 A/Eng/394/08_F32/08 nimr-feb-2009-table5 640 A/Uruguay/716/2007 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-feb-2009-table5 640 A/Uruguay/716/2007 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2009-table5 2560 A/Uruguay/716/2007 A/England/394/2008 A/Eng/394/08_F32/08 nimr-feb-2009-table5 320 A/England/394/2008 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-feb-2009-table5 320 A/England/394/2008 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2009-table5 640 A/England/394/2008 A/England/394/2008 A/Eng/394/08_F32/08 nimr-feb-2009-table5 640 A/England/392/2008 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-feb-2009-table5 160 A/England/392/2008 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2009-table5 640 A/England/392/2008 A/England/394/2008 A/Eng/394/08_F32/08 nimr-feb-2009-table5 1280 A/England/394/2008 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-feb-2009-table5 160 A/England/394/2008 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2009-table5 640 A/England/394/2008 A/England/394/2008 A/Eng/394/08_F32/08 nimr-feb-2009-table5 1280 A/Uruguay/716/2007 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2010-table12 2560 A/Uruguay/716/2007 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-feb-2010-table12 <40 A/Wisconsin/15/2009 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2010-table12 <40 A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-feb-2010-table12 160 A/Uruguay/716/2007 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2010-table13 1280 A/Uruguay/716/2007 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-feb-2010-table13 <40 A/Uruguay/716/2007 A/HongKong/26560/2009 A/HK/26560/09_CDCF38/10 nimr-feb-2010-table13 40 A/Wisconsin/15/2009 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2010-table13 40 A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-feb-2010-table13 160 A/Wisconsin/15/2009 A/HongKong/26560/2009 A/HK/26560/09_CDCF38/10 nimr-feb-2010-table13 1280 A/HongKong/26560/2009 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-feb-2010-table13 <40 A/HongKong/26560/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-feb-2010-table13 80 A/HongKong/26560/2009 A/HongKong/26560/2009 A/HK/26560/09_CDCF38/10 nimr-feb-2010-table13 1280 A/Nepal/921/2006 A/Nepal/921/2006 A/Nepal/921/06_F2/07 nimr-march-2008-table5 5120 A/Nepal/921/2006 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-march-2008-table5 640 A/Wisconsin/3/2007 A/Nepal/921/2006 A/Nepal/921/06_F2/07 nimr-march-2008-table5 5120 A/Wisconsin/3/2007 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-march-2008-table5 2560 A/Uruguay/716/2007 A/Nepal/921/2006 A/Nepal/921/06_F2/07 nimr-march-2008-table5 2560 A/Uruguay/716/2007 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-march-2008-table5 640 A/Uruguay/716/2007 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-sep-2010-table8 1280 A/Uruguay/716/2007 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2010-table8 <40 A/Uruguay/716/2007 A/RhodeIsland/1/2010 A/RhodeIs/1/10_CDC77/10 nimr-sep-2010-table8 40 A/Wisconsin/15/2009 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-sep-2010-table8 <40 A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2010-table8 320 A/Wisconsin/15/2009 A/RhodeIsland/1/2010 A/RhodeIs/1/10_CDC77/10 nimr-sep-2010-table8 320 A/RhodeIsland/1/2010 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-sep-2010-table8 40 A/RhodeIsland/1/2010 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2010-table8 80 A/RhodeIsland/1/2010 A/RhodeIsland/1/2010 A/RhodeIs/1/10_CDC77/10 nimr-sep-2010-table8 640 A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-04-12 320 A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-05-13 160 A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-05-18 320 A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-06-24 160 A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-06-24b 160 augur-24.2.2/tests/functional/titers/data/tree.nwk000066400000000000000000000064531456376326500221640ustar00rootroot00000000000000(A/HongKong/1/1968:0.00000019,(A/Bilthoven/16190/1968:0.00253241,(A/Bilthoven/93/1970:0.00493457,(A/England/42/1972:0.00353934,(A/Bilthoven/5146/1974:0.00822900,((A/Bilthoven/5168/1976:0.00671282,A/Victoria/3/1975:0.00309612)NODE_0000012:0.00330581,(A/Bilthoven/2271/1976:0.00429486,((A/ChristChurch/2/1988:0.00624898,A/Leningrad/360/1986:0.00241853)NODE_0000009:0.00173143,(A/Victoria/7/1987:0.00030682,(A/Seoul/1/1990:0.00496493,((A/SouthAustralia/23/1992:0.00354267,A/SouthAustralia/27/1992:0.00195169)NODE_0000005:0.00864284,((A/Oslo/2352/1993:0.00467509,(A/Madrid/G130/1993:0.00395630,(A/Shiga/6/1993:0.00052771,A/Yamagata/62/1993:0.00112161)NODE_0000001:0.00103287)NODE_0000000:0.00059791)NODE_0000002:0.00150808,(A/Netherlands/115/1993:0.00258321,((A/Netherlands/371/1993:0.00364178,(A/Johannesburg/47/1994:0.00370814,(A/HongKong/55/1994:0.00164887,A/Johannesburg/33/1994:0.00039370)NODE_0000021:0.00040568)NODE_0000020:0.00405715)NODE_0000019:0.00112280,(A/HongKong/32/1995:0.00393161,(A/Geneva/AI9509/1995:0.00057862,A/HongKong/38/1995:0.00279736)NODE_0000023:0.00273552,(A/Wuhan/359/1995:0.00208351,((A/HongKong/280/1997:0.00461567,A/Oslo/244/1997:0.00283649)NODE_0000026:0.00258906,(A/Netherlands/414/1998:0.00143799,(A/Philippines/1159050/2002:0.01227338,((A/SouthAustralia/102/2001:0.00268182,(A/Victoria/102/2003:0.00245017,(A/NewCaledonia/6/2002:0.00242929,A/Sofia/141/2003:0.00560041)NODE_0000032:0.00087908)NODE_0000031:0.00101658)NODE_0000030:0.00439368,((A/Brisbane/6/2002:0.00219680,A/HongKong/1550/2002:0.00060601)NODE_0000034:0.00043722,(A/Brisbane/5/2002:0.00197062,(A/Cheonnam/432/2002:0.00116030,(A/Auckland/6/2003:0.00239482,A/Wyoming/2/2003:0.00167586,(A/Brisbane/7/2003:0.00151903,(A/Louisiana/4/2003:0.00187104,A/Texas/40/2003:0.00255578)NODE_0000039:0.00093082)NODE_0000038:0.00098044,(A/Fujian/445/2003:0.00364354,(A/Singapore/95/2003:0.00074383,(A/Wellington/1/2004:0.00274647,(A/Lyon/108/2005:0.00394564,(A/Singapore/38/2005:0.00291858,A/Brisbane/3/2005:0.00140105)NODE_0000044:0.00255506,(A/California/20/2005:0.00279379,A/Singapore/35/2005:0.00087855,A/Singapore/70/2005:0.00162162,A/Taiwan/83/2006:0.00348453,((A/Singapore/57/2006:0.00298023,A/Nepal/921/2006:0.00484314)NODE_0000047:0.00121762,(A/Brisbane/9/2006:0.00306187,((A/Uruguay/716/2007:0.00287398,A/Wisconsin/3/2007:0.00287148)NODE_0000050:0.00117489,((A/England/392/2008:0.00047445,A/England/394/2008:0.00149410)NODE_0000052:0.00100533,(A/RhodeIsland/1/2010:0.00927808,(A/HongKong/26560/2009:0.00285300,A/Wisconsin/15/2009:0.00098001)NODE_0000054:0.00274248)NODE_0000053:0.00201594)NODE_0000051:0.00400927)NODE_0000049:0.00398745)NODE_0000048:0.00089190)NODE_0000046:0.00087747)NODE_0000045:0.00452183)NODE_0000043:0.00074319)NODE_0000042:0.00061807)NODE_0000041:0.00228223)NODE_0000040:0.00082350)NODE_0000037:0.00051326)NODE_0000036:0.00297673)NODE_0000035:0.00052736)NODE_0000033:0.00689046)NODE_0000029:0.00113716)NODE_0000028:0.00646450)NODE_0000027:0.00917857)NODE_0000025:0.00048842)NODE_0000024:0.00504016)NODE_0000022:0.00558442)NODE_0000018:0.00082230)NODE_0000017:0.00079514)NODE_0000003:0.00992414)NODE_0000004:0.00327958)NODE_0000006:0.00685324)NODE_0000007:0.00414748)NODE_0000008:0.03894233)NODE_0000010:0.00532964)NODE_0000011:0.00564707)NODE_0000013:0.00441742)NODE_0000014:0.01137769)NODE_0000015:0.00232021)NODE_0000016:0.00232843)NODE_0000055:0.00100000; augur-24.2.2/tests/functional/traits.t000066400000000000000000000056441456376326500177550ustar00rootroot00000000000000Integration tests for augur traits. $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../bin/augur}" Infer the ancestral region for a given tree and metadata. $ ${AUGUR} traits \ > --metadata "traits/metadata.tsv" \ > --tree "traits/tree.nwk" \ > --columns region \ > --output-node-data "$TMP/traits.json" > /dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" "traits/traits_region.json" "$TMP/traits.json" --significant-digits 5 {} $ rm -f "$TMP/traits.json" Infer the ancestral region for a tree and metadata where one or more records have a missing value ("?") in the region field. Tips with missing values should get their values inferred, too. In this case, a sample from Panama (North America) has its region inferred as "South America". $ ${AUGUR} traits \ > --metadata "traits/metadata_with_missing_region.tsv" \ > --tree "traits/tree.nwk" \ > --columns region \ > --output-node-data "$TMP/traits.json" > /dev/null $ python3 "$TESTDIR/../../scripts/diff_jsons.py" "traits/traits_with_missing_region.json" "$TMP/traits.json" --significant-digits 2 {} $ rm -f "$TMP/traits.json" Infer the ancestral "virus" value from the same metadata. Since there is only a single virus in the data, Augur warns the user through stderr. $ ${AUGUR} traits \ > --metadata "traits/metadata.tsv" \ > --tree "traits/tree.nwk" \ > --columns virus \ > --output-node-data "$TMP/traits.json" > /dev/null WARNING: only one state found for discrete state reconstruction: ['zika'] $ python3 "$TESTDIR/../../scripts/diff_jsons.py" "traits/traits_virus.json" "$TMP/traits.json" --significant-digits 5 {} $ rm -f "$TMP/traits.json" Repeat inference of a trait with a single value, but request confidence intervals. This should similarly warn the user through stderr, but it should produce an error. $ ${AUGUR} traits \ > --metadata "traits/metadata.tsv" \ > --tree "traits/tree.nwk" \ > --columns virus \ > --confidence \ > --output-node-data "$TMP/traits.json" > /dev/null WARNING: only one state found for discrete state reconstruction: ['zika'] $ python3 "$TESTDIR/../../scripts/diff_jsons.py" "traits/traits_virus.json" "$TMP/traits.json" --significant-digits 5 {} $ rm -f "$TMP/traits.json" Infer the ancestral "virus" value from the metadata after replacing the "zika" values with missing data values ("?"). Augur should warn that there were no discrete states found for reconstruction, since "?" is not a valid state on its own. $ sed 's/zika/?/' traits/metadata.tsv > "$TMP/metadata_with_missing_virus.tsv" $ ${AUGUR} traits \ > --metadata "$TMP/metadata_with_missing_virus.tsv" \ > --tree "traits/tree.nwk" \ > --columns virus \ > --output-node-data "$TMP/traits.json" > /dev/null WARNING: no states found for discrete state reconstruction. $ rm -f "$TMP/traits.json" Switch back to the original directory where testing started. $ popd > /dev/null augur-24.2.2/tests/functional/traits/000077500000000000000000000000001456376326500175575ustar00rootroot00000000000000augur-24.2.2/tests/functional/traits/metadata.tsv000066400000000000000000000075461456376326500221110ustar00rootroot00000000000000strain virus accession date region country division city db segment authors url title journal paper_url PAN/CDC_259359_V1_V3/2015 zika KX156774 2015-12-18 North America Panama Panama Panama genbank genome Shabman et al https://www.ncbi.nlm.nih.gov/nuccore/KX156774 Direct Submission Submitted (29-APR-2016) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ COL/FLR_00024/2015 zika MF574569 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574569 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ PRVABC59 zika KU501215 2015-12-XX North America Puerto Rico Puerto Rico Puerto Rico genbank genome Lanciotti et al https://www.ncbi.nlm.nih.gov/nuccore/KU501215 Phylogeny of Zika Virus in Western Hemisphere, 2015 Emerging Infect. Dis. 22 (5), 933-935 (2016) https://www.ncbi.nlm.nih.gov/pubmed/27088323 COL/FLR_00008/2015 zika MF574562 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574562 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ Colombia/2016/ZC204Se zika KY317939 2016-01-06 South America Colombia Colombia Colombia genbank genome Quick et al https://www.ncbi.nlm.nih.gov/nuccore/KY317939 Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples Nat Protoc 12 (6), 1261-1276 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538739 ZKC2/2016 zika KX253996 2016-02-16 Oceania American Samoa American Samoa American Samoa genbank genome Wu et al https://www.ncbi.nlm.nih.gov/nuccore/KX253996 Direct Submission Submitted (18-MAY-2016) Center for Diseases Control and Prevention of Guangdong Province; National Institute of Viral Disease Control and Prevention, China https://www.ncbi.nlm.nih.gov/pubmed/ VEN/UF_1/2016 zika KX702400 2016-03-25 South America Venezuela Venezuela Venezuela genbank genome Blohm et al https://www.ncbi.nlm.nih.gov/nuccore/KX702400 Complete Genome Sequences of Identical Zika virus Isolates in a Nursing Mother and Her Infant Genome Announc 5 (17), e00231-17 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28450510 DOM/2016/BB_0059 zika KY785425 2016-04-04 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785425 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 BRA/2016/FC_6706 zika KY785433 2016-04-08 South America Brazil Brazil Brazil genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785433 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 DOM/2016/BB_0183 zika KY785420 2016-04-18 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785420 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 EcEs062_16 zika KX879603 2016-04-XX South America Ecuador Ecuador Ecuador genbank genome Marquez et al https://www.ncbi.nlm.nih.gov/nuccore/KX879603 First Complete Genome Sequences of Zika Virus Isolated from Febrile Patient Sera in Ecuador Genome Announc 5 (8), e01673-16 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28232448 HND/2016/HU_ME59 zika KY785418 2016-05-13 North America Honduras Honduras Honduras genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785418 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 augur-24.2.2/tests/functional/traits/metadata_with_missing_region.tsv000066400000000000000000000075321456376326500262330ustar00rootroot00000000000000strain virus accession date region country division city db segment authors url title journal paper_url PAN/CDC_259359_V1_V3/2015 zika KX156774 2015-12-18 ? Panama Panama Panama genbank genome Shabman et al https://www.ncbi.nlm.nih.gov/nuccore/KX156774 Direct Submission Submitted (29-APR-2016) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ COL/FLR_00024/2015 zika MF574569 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574569 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ PRVABC59 zika KU501215 2015-12-XX North America Puerto Rico Puerto Rico Puerto Rico genbank genome Lanciotti et al https://www.ncbi.nlm.nih.gov/nuccore/KU501215 Phylogeny of Zika Virus in Western Hemisphere, 2015 Emerging Infect. Dis. 22 (5), 933-935 (2016) https://www.ncbi.nlm.nih.gov/pubmed/27088323 COL/FLR_00008/2015 zika MF574562 2015-12-XX South America Colombia Colombia Colombia genbank genome Pickett et al https://www.ncbi.nlm.nih.gov/nuccore/MF574562 Direct Submission Submitted (28-JUL-2017) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA https://www.ncbi.nlm.nih.gov/pubmed/ Colombia/2016/ZC204Se zika KY317939 2016-01-06 South America Colombia Colombia Colombia genbank genome Quick et al https://www.ncbi.nlm.nih.gov/nuccore/KY317939 Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples Nat Protoc 12 (6), 1261-1276 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538739 ZKC2/2016 zika KX253996 2016-02-16 Oceania American Samoa American Samoa American Samoa genbank genome Wu et al https://www.ncbi.nlm.nih.gov/nuccore/KX253996 Direct Submission Submitted (18-MAY-2016) Center for Diseases Control and Prevention of Guangdong Province; National Institute of Viral Disease Control and Prevention, China https://www.ncbi.nlm.nih.gov/pubmed/ VEN/UF_1/2016 zika KX702400 2016-03-25 South America Venezuela Venezuela Venezuela genbank genome Blohm et al https://www.ncbi.nlm.nih.gov/nuccore/KX702400 Complete Genome Sequences of Identical Zika virus Isolates in a Nursing Mother and Her Infant Genome Announc 5 (17), e00231-17 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28450510 DOM/2016/BB_0059 zika KY785425 2016-04-04 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785425 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 BRA/2016/FC_6706 zika KY785433 2016-04-08 South America Brazil Brazil Brazil genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785433 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 DOM/2016/BB_0183 zika KY785420 2016-04-18 North America Dominican Republic Dominican Republic Dominican Republic genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785420 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 EcEs062_16 zika KX879603 2016-04-XX South America Ecuador Ecuador Ecuador genbank genome Marquez et al https://www.ncbi.nlm.nih.gov/nuccore/KX879603 First Complete Genome Sequences of Zika Virus Isolated from Febrile Patient Sera in Ecuador Genome Announc 5 (8), e01673-16 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28232448 HND/2016/HU_ME59 zika KY785418 2016-05-13 North America Honduras Honduras Honduras genbank genome Metsky et al https://www.ncbi.nlm.nih.gov/nuccore/KY785418 Zika virus evolution and spread in the Americas Nature 546 (7658), 411-415 (2017) https://www.ncbi.nlm.nih.gov/pubmed/28538734 augur-24.2.2/tests/functional/traits/traits_region.json000066400000000000000000000034741456376326500233330ustar00rootroot00000000000000{ "generated_by": { "program": "augur", "version": "23.0.0" }, "models": { "region": { "alphabet": [ "North America", "Oceania", "South America", "?" ], "equilibrium_probabilities": [ 0.3492565486784079, 0.30498046473781987, 0.3457629865837723 ], "rate": 3.7369310353119842, "transition_matrix": [ [ 0.0, 1.2210267787198055, 1.9211454872976352 ], [ 1.2210267787198055, 0.0, 1.3081255335648412 ], [ 1.9211454872976352, 1.3081255335648412, 0.0 ] ] } }, "nodes": { "BRA/2016/FC_6706": { "region": "South America" }, "COL/FLR_00008/2015": { "region": "South America" }, "Colombia/2016/ZC204Se": { "region": "South America" }, "DOM/2016/BB_0183": { "region": "North America" }, "EcEs062_16": { "region": "South America" }, "HND/2016/HU_ME59": { "region": "North America" }, "NODE_0000001": { "region": "South America" }, "NODE_0000002": { "region": "South America" }, "NODE_0000003": { "region": "South America" }, "NODE_0000004": { "region": "North America" }, "NODE_0000005": { "region": "South America" }, "NODE_0000006": { "region": "South America" }, "NODE_0000007": { "region": "South America" }, "NODE_0000008": { "region": "South America" }, "PAN/CDC_259359_V1_V3/2015": { "region": "North America" }, "PRVABC59": { "region": "North America" }, "VEN/UF_1/2016": { "region": "South America" }, "ZKC2/2016": { "region": "Oceania" } } }augur-24.2.2/tests/functional/traits/traits_virus.json000066400000000000000000000020421456376326500232060ustar00rootroot00000000000000{ "generated_by": { "program": "augur", "version": "14.1.0" }, "models": {}, "nodes": { "BRA/2016/FC_6706": { "virus": "zika" }, "COL/FLR_00008/2015": { "virus": "zika" }, "Colombia/2016/ZC204Se": { "virus": "zika" }, "DOM/2016/BB_0183": { "virus": "zika" }, "EcEs062_16": { "virus": "zika" }, "HND/2016/HU_ME59": { "virus": "zika" }, "NODE_0000001": { "virus": "zika" }, "NODE_0000002": { "virus": "zika" }, "NODE_0000003": { "virus": "zika" }, "NODE_0000004": { "virus": "zika" }, "NODE_0000005": { "virus": "zika" }, "NODE_0000006": { "virus": "zika" }, "NODE_0000007": { "virus": "zika" }, "NODE_0000008": { "virus": "zika" }, "PAN/CDC_259359_V1_V3/2015": { "virus": "zika" }, "PRVABC59": { "virus": "zika" }, "VEN/UF_1/2016": { "virus": "zika" }, "ZKC2/2016": { "virus": "zika" } } }augur-24.2.2/tests/functional/traits/traits_with_missing_region.json000066400000000000000000000034721456376326500261150ustar00rootroot00000000000000{ "generated_by": { "program": "augur", "version": "23.0.0" }, "models": { "region": { "alphabet": [ "North America", "Oceania", "South America", "?" ], "equilibrium_probabilities": [ 0.265646217971813, 0.34327012422701614, 0.3910836578011709 ], "rate": 2.640089828843385, "transition_matrix": [ [ 0.0, 1.4755341856929653, 1.5895341821767266 ], [ 1.4755341856929653, 0.0, 1.4921103908681614 ], [ 1.5895341821767266, 1.4921103908681614, 0.0 ] ] } }, "nodes": { "BRA/2016/FC_6706": { "region": "South America" }, "COL/FLR_00008/2015": { "region": "South America" }, "Colombia/2016/ZC204Se": { "region": "South America" }, "DOM/2016/BB_0183": { "region": "North America" }, "EcEs062_16": { "region": "South America" }, "HND/2016/HU_ME59": { "region": "North America" }, "NODE_0000001": { "region": "South America" }, "NODE_0000002": { "region": "North America" }, "NODE_0000003": { "region": "North America" }, "NODE_0000004": { "region": "North America" }, "NODE_0000005": { "region": "South America" }, "NODE_0000006": { "region": "South America" }, "NODE_0000007": { "region": "South America" }, "NODE_0000008": { "region": "South America" }, "PAN/CDC_259359_V1_V3/2015": { "region": "South America" }, "PRVABC59": { "region": "North America" }, "VEN/UF_1/2016": { "region": "South America" }, "ZKC2/2016": { "region": "Oceania" } } }augur-24.2.2/tests/functional/traits/tree.nwk000066400000000000000000000007311456376326500212400ustar00rootroot00000000000000((Colombia/2016/ZC204Se:0.00105368,(PAN/CDC_259359_V1_V3/2015:0.00076051,(COL/FLR_00008/2015:0.00044440,VEN/UF_1/2016:0.00089377)NODE_0000008:0.00038502)NODE_0000007:0.00019253)NODE_0000001:0.00080159,(BRA/2016/FC_6706:0.00214920,(ZKC2/2016:0.00173693,(HND/2016/HU_ME59:0.00206150,PRVABC59:0.00135309)NODE_0000004:0.00013537,(EcEs062_16:0.00175918,DOM/2016/BB_0183:0.00184905)NODE_0000002:0.00021565)NODE_0000003:0.00013737)NODE_0000005:0.00019772)NODE_0000006:0.00100000; augur-24.2.2/tests/functional/translate/000077500000000000000000000000001456376326500202465ustar00rootroot00000000000000augur-24.2.2/tests/functional/translate/cram/000077500000000000000000000000001456376326500211705ustar00rootroot00000000000000augur-24.2.2/tests/functional/translate/cram/basic-error-checking.t000066400000000000000000000010751456376326500253410ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export SCRIPTS="$TESTDIR/../../../../scripts" $ export ANC_DATA="$TESTDIR/../../ancestral/data/simple-genome" $ export DATA="$TESTDIR/../data/simple-genome" Missing reference file $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence $DATA/reference.doesnt-exist.gff \ > --output-node-data "aa_muts.json" > /dev/null ERROR: reference sequence file '.+/reference.doesnt-exist.gff' not found (re) [2] augur-24.2.2/tests/functional/translate/cram/genbank.t000066400000000000000000000021561456376326500227660ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export ANC_DATA="$TESTDIR/../../ancestral/data/simple-genome" $ export DATA="$TESTDIR/../data/simple-genome" These tests are intended to test variants of GenBank reference file formatting Remove the mandatory source feature from the file $ sed '5,6d' "$DATA/reference.gb" > "reference.no-source.gb" $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence "reference.no-source.gb" \ > --output-node-data "aa_muts.json" ERROR: Reference .+ did not define the mandatory source feature. (re) [2] Remove a nucleotide from the ORIGIN sequence so the coordinates don't match the source $ sed 's/TGACCATAAA/TGACCATAA/' "$DATA/reference.gb" > "reference.short-origin.gb" $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence "reference.short-origin.gb" \ > --output-node-data "aa_muts.json" .+ BiopythonParserWarning: .+ (re) .+ (re) ERROR: Reference .+ (re) [2] augur-24.2.2/tests/functional/translate/cram/general.t000066400000000000000000000030561456376326500227760ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export SCRIPTS="$TESTDIR/../../../../scripts" $ export ANC_DATA="$TESTDIR/../../ancestral/data/simple-genome" $ export DATA="$TESTDIR/../data/simple-genome" General running of augur translate. See the cram test general.t for `augur ancestral` which uses many of the same files. NOTE: The GFF reference here contains a 'source' ID because without this downstream commands which validate the output will fail as it's missing a 'nuc' annotation. $ ${AUGUR} translate \ > --tree "$ANC_DATA/tree.nwk" \ > --ancestral-sequences "$ANC_DATA/nt_muts.ref-seq.json" \ > --reference-sequence "$DATA/reference.gff" \ > --output-node-data "aa_muts.json" > /dev/null $ python3 "$SCRIPTS/diff_jsons.py" \ > "$DATA/aa_muts.json" \ > "aa_muts.json" \ > --exclude-regex-paths "root\['annotations'\]\['.+'\]\['seqid'\]" "root['meta']['updated']" {} Same as above but using a GenBank file. This changes the 'type' of the annotations, but this is irrelevant for Auspice's use and simply reflects the reference source. $ ${AUGUR} translate \ > --tree "$ANC_DATA/tree.nwk" \ > --ancestral-sequences "$ANC_DATA/nt_muts.ref-seq.json" \ > --reference-sequence "$DATA/reference.gb" \ > --output-node-data "aa_muts.genbank.json" > /dev/null $ python3 "$SCRIPTS/diff_jsons.py" \ > "$DATA/aa_muts.json" \ > "aa_muts.genbank.json" \ > --exclude-regex-paths "root\['annotations'\]\['.+'\]\['seqid'\]" "root\['annotations'\]\['.+'\]\['type'\]" "root['meta']['updated']" {} augur-24.2.2/tests/functional/translate/cram/genes.t000066400000000000000000000033311456376326500224560ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export SCRIPTS="$TESTDIR/../../../../scripts" $ export ANC_DATA="$TESTDIR/../../ancestral/data/simple-genome" $ export DATA="$TESTDIR/../data/simple-genome" Similar tests to those in `general.t` but here testing the --genes argument. Note that the output is a little misleading, as it's counting the 'source' GFF ID as a feature ('nuc' in this case) $ ${AUGUR} translate \ > --tree "$ANC_DATA/tree.nwk" \ > --ancestral-sequences "$ANC_DATA/nt_muts.ref-seq.json" \ > --reference-sequence "$DATA/reference.gff" \ > --genes gene2 gene3 \ > --output-node-data "aa_muts.genes-args.json" Couldn't find gene gene3 in GFF or GenBank file Read in 2 features from reference sequence file Validating schema of .+ (re) amino acid mutations written to .+ (re) $ python3 "$SCRIPTS/diff_jsons.py" \ > "$DATA/aa_muts.json" \ > "aa_muts.genes-args.json" \ > --exclude-regex-paths "seqid" "gene1" "root['meta']['updated']" {} Using a text file rather than command line arguments $ echo -e "#comment\ngene2\ngene3"> "genes.txt" $ ${AUGUR} translate \ > --tree "$ANC_DATA/tree.nwk" \ > --ancestral-sequences "$ANC_DATA/nt_muts.ref-seq.json" \ > --reference-sequence "$DATA/reference.gff" \ > --genes "genes.txt" \ > --output-node-data "aa_muts.genes-txt.json" Read in 2 specified genes to translate. Couldn't find gene gene3 in GFF or GenBank file Read in 2 features from reference sequence file Validating schema of .+ (re) amino acid mutations written to .+ (re) $ python3 "$SCRIPTS/diff_jsons.py" \ > "aa_muts.genes-args.json" \ > "aa_muts.genes-txt.json" \ > --exclude-paths "root['meta']['updated']" {} augur-24.2.2/tests/functional/translate/cram/gff.t000066400000000000000000000071251456376326500221240ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export SCRIPTS="$TESTDIR/../../../../scripts" $ export ANC_DATA="$TESTDIR/../../ancestral/data/simple-genome" $ export DATA="$TESTDIR/../data/simple-genome" These tests are intended to test variants of GFF formatting GFF file with no valid rows $ head -n 3 $DATA/reference.gff > "reference.empty.gff" $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence "reference.empty.gff" \ > --output-node-data "aa_muts.json" > /dev/null ERROR: Reference 'reference.empty.gff' contains no valid data rows. .+ (re) [2] GFF file with an extra record $ cp $DATA/reference.gff "reference.double.gff" $ echo -e "additional\tRefSeq\tsource\t1\t10\t.\t+\t.\tID=additional" >> "reference.double.gff" $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence "reference.double.gff" \ > --output-node-data "aa_muts.json" ERROR: Reference 'reference.double.gff' contains multiple seqids .+ (re) [2] GFF file with data row GFF type 'region' replaced by 'source' _and_ the ##sequence-region pragma removed. This essentially mimics the information augur 23.1.1 and earlier would use, before augur started parsing region and/or the ##sequence-region pragma. $ grep -v '##sequence-region' "$DATA/reference.gff" | > sed 's/\tregion\t/\tsource\t/' > "reference-only.gff" $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence "reference-only.gff" \ > --output-node-data "aa_muts-only.json" > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$DATA/aa_muts.json" \ > "aa_muts-only.json" \ > --exclude-regex-paths "root\['annotations'\]\['.+'\]\['seqid'\]" {'values_changed': {"root['annotations']['nuc']['type']": {'new_value': 'source', 'old_value': '##sequence-region pragma'}}} GFF file with data row added with GFF type 'source' with coordinates which don't match $ sed '5s/^/reference_name\tRefSeq\tsource\t1\t70\t.\t+\t.\tID=reference_name\n/' \ > "$DATA/reference.gff" > "reference-contradicts.gff" $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence "reference-contradicts.gff" \ > --output-node-data "aa_muts.json" ERROR: Reference .+ contained contradictory coordinates .+ (re) [2] GFF file with 'region' removed, so the only genome information is the ##sequence-region pragma $ egrep -v '\tregion\t' "$DATA/reference.gff" > "reference.pragma-only.gff" $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence "reference.pragma-only.gff" \ > --output-node-data "aa_muts.pragma-only.json" > /dev/null $ python3 "$TESTDIR/../../../../scripts/diff_jsons.py" \ > "$DATA/aa_muts.json" \ > "aa_muts.pragma-only.json" \ > --exclude-regex-paths "root\['annotations'\]\['.+'\]\['seqid'\]" "root['meta']['updated']" {} GFF file with no genome coordinate information $ egrep -v 'region' "$DATA/reference.gff" > "reference.no-nuc-info.gff" $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence "reference.no-nuc-info.gff" \ > --output-node-data "aa_muts.json" ERROR: Reference .+ didn't define any information we can use to create the 'nuc' annotation. .+ (re) [2]augur-24.2.2/tests/functional/translate/cram/invalid-args.t000066400000000000000000000041731456376326500237420ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export SCRIPTS="$TESTDIR/../../../../scripts" $ export ANC_DATA="$TESTDIR/../../ancestral/data/simple-genome" $ export DATA="$TESTDIR/../data/simple-genome" Input JSON + VCF output is not possible (and vice-versa) $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences $ANC_DATA/nt_muts.ref-seq.json \ > --reference-sequence $DATA/reference.gff \ > --alignment-output "translations.vcf" ERROR: When using a non-VCF input the --alignment-output filename must not be a VCF file [2] $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences input.vcf \ > --vcf-reference reference_in.fasta \ > --reference-sequence $DATA/reference.gff \ > --alignment-output "translations.fasta" ERROR: When using a VCF input the --alignment-output filename must also be a VCF file [2] The arg --vcf-reference-output needs --alignment-output $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences input.vcf \ > --reference-sequence $DATA/reference.gff \ > --vcf-reference reference_in.fasta \ > --vcf-reference-output reference_out.fasta ERROR: The VCF reference output (--vcf-reference-output) needs --alignment-output [2] If VCF input with requested alignment output then we require --vcf-reference-output (This was not the case in augur 23.1.1 and earlier, where we would automatically create a filename) $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences input.vcf \ > --vcf-reference reference_in.fasta \ > --reference-sequence $DATA/reference.gff \ > --alignment-output "translations.vcf" ERROR: When using a VCF input and --alignment-output, we now require you to specify the --vcf-reference-output as well [2] VCF input must have a FASTA reference provided $ ${AUGUR} translate \ > --tree $ANC_DATA/tree.nwk \ > --ancestral-sequences input.vcf \ > --reference-sequence $DATA/reference.gff \ > --alignment-output "translations.vcf" ERROR: A reference FASTA (--vcf-reference) is required with VCF-format input [2] augur-24.2.2/tests/functional/translate/cram/root-mutations.t000066400000000000000000000032211456376326500243570ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export SCRIPTS="$TESTDIR/../../../../scripts" $ export ANC_DATA="$TESTDIR/../../ancestral/data/simple-genome" $ export DATA="$TESTDIR/../data/simple-genome" This is the same as the "general.t" test, but we are modifying the input data such that the reference sequence contains "G" at pos 20 (1-based), and include a compensating mutation G20A on the root node. (This manipulation would be much nicer using `jq` but it's not (yet) available in all nextstrain environments.) This results in the reference translation of gene1 to be MPCE* not MPCG*. (Note that the compensating nuc mutation doesn't actually need to be present in the JSON, `augur translate` just looks at the sequence attached to each node.) $ sed '24s/^/ "G20A",\n/' "$ANC_DATA/nt_muts.ref-seq.json" | > sed 's/"nuc": "AAAAAAAAAATGCCCTGCGGG/"nuc": "AAAAAAAAAATGCCCTGCGAG/' > nt_muts.json $ ${AUGUR} translate \ > --tree "$ANC_DATA/tree.nwk" \ > --ancestral-sequences nt_muts.json \ > --reference-sequence "$DATA/reference.gff" \ > --output-node-data "aa_muts.json" > /dev/null The output should be a gene1 reference of MPCE* (not MPCG*). The root-sequence is unchanged (MPCG*). There is also a mutation E4G at the root node to compensate. $ python3 "$SCRIPTS/diff_jsons.py" \ > "$DATA/aa_muts.json" \ > "aa_muts.json" \ > --exclude-regex-paths "root\['annotations'\]\['.+'\]\['seqid'\]" "root['meta']['updated']" {'values_changed': {"root['reference']['gene1']": {'new_value': 'MPCE*', 'old_value': 'MPCG*'}}, 'iterable_item_added': {"root['nodes']['node_root']['aa_muts']['gene1'][0]": 'E4G'}}augur-24.2.2/tests/functional/translate/cram/translate-with-genbank.t000066400000000000000000000015311456376326500257260ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export DATA="$TESTDIR/../data" $ export SCRIPTS="$TESTDIR/../../../../scripts" Translate amino acids for genes using a GenBank file. $ ${AUGUR} translate \ > --tree "$DATA/zika/tree.nwk" \ > --ancestral-sequences "$DATA/zika/nt_muts.json" \ > --reference-sequence "$DATA/zika/zika_outgroup.gb" \ > --genes CA PRO \ > --output-node-data aa_muts.json WARNING: 1 CDS features skipped as they didn't have a locus_tag or gene qualifier. Read in 3 features from reference sequence file Validating schema of '.+nt_muts.json'... (re) amino acid mutations written to .* (re) $ python3 "$SCRIPTS/diff_jsons.py" $DATA/zika/aa_muts_genbank.json aa_muts.json \ > --exclude-regex-paths "root\['annotations'\]\['.+'\]\['seqid'\]" "root['meta']['updated']" {} augur-24.2.2/tests/functional/translate/cram/translate-with-gff-and-gene-name.t000066400000000000000000000020701456376326500274540ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export DATA="$TESTDIR/../data" $ export SCRIPTS="$TESTDIR/../../../../scripts" Translate amino acids for genes using a GFF3 file where the gene names are stored in a qualifier named "gene_name". $ cat >genemap.gff <<~~ > ##gff-version 3 > ##sequence-region PF13/251013_18 1 10769 > PF13/251013_18 GenBank gene 91 456 . + . gene_name="CA" > PF13/251013_18 GenBank gene 457 735 . + . gene_name="PRO" > ~~ $ ${AUGUR} translate \ > --tree "${DATA}/zika/tree.nwk" \ > --ancestral-sequences "${DATA}/zika/nt_muts.json" \ > --reference-sequence "genemap.gff" \ > --output-node-data aa_muts.json Read in 3 features from reference sequence file Validating schema of '.+/nt_muts.json'... (re) amino acid mutations written to .* (re) Other than the sequence ids which will include a temporary path, the JSONs should be identical. $ python3 "${SCRIPTS}/diff_jsons.py" \ > --exclude-regex-paths "['seqid']" -- \ > "${DATA}/zika/aa_muts_gff.json" \ > aa_muts.json {} augur-24.2.2/tests/functional/translate/cram/translate-with-gff-and-gene.t000066400000000000000000000017061456376326500265430ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export DATA="$TESTDIR/../data" $ export SCRIPTS="$TESTDIR/../../../../scripts" Translate amino acids for genes using a GFF3 file where the gene names are stored in a qualifier named "gene". $ cat >genemap.gff <<~~ > ##gff-version 3 > ##sequence-region PF13/251013_18 1 10769 > PF13/251013_18 GenBank gene 91 456 . + . gene="CA" > PF13/251013_18 GenBank gene 457 735 . + . gene="PRO" > ~~ $ ${AUGUR} translate \ > --tree "${DATA}/zika/tree.nwk" \ > --ancestral-sequences "${DATA}/zika/nt_muts.json" \ > --reference-sequence genemap.gff \ > --output-node-data aa_muts.json Read in 3 features from reference sequence file Validating schema of '.+/nt_muts.json'... (re) amino acid mutations written to .* (re) $ python3 "${SCRIPTS}/diff_jsons.py" \ > --exclude-regex-paths "['seqid']" -- \ > "${DATA}/zika/aa_muts_gff.json" \ > aa_muts.json {} augur-24.2.2/tests/functional/translate/cram/translate-with-gff-and-locus-tag.t000066400000000000000000000017231456376326500275220ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export DATA="$TESTDIR/../data" $ export SCRIPTS="$TESTDIR/../../../../scripts" This is an identical test setup as `translate-with-gff-and-gene.t` but using locus_tag instead of gene in the GFF $ cat >genemap.gff <<~~ > ##gff-version 3 > ##sequence-region PF13/251013_18 1 10769 > PF13/251013_18 GenBank gene 91 456 . + . locus_tag="CA" > PF13/251013_18 GenBank gene 457 735 . + . locus_tag="PRO" > ~~ $ ${AUGUR} translate \ > --tree "${DATA}/zika/tree.nwk" \ > --ancestral-sequences "${DATA}/zika/nt_muts.json" \ > --reference-sequence genemap.gff \ > --output-node-data aa_muts.json Read in 3 features from reference sequence file Validating schema of '.+/nt_muts.json'... (re) amino acid mutations written to .* (re) $ python3 "${SCRIPTS}/diff_jsons.py" \ > --exclude-regex-paths "['seqid']" -- \ > "${DATA}/zika/aa_muts_gff.json" \ > aa_muts.json {} augur-24.2.2/tests/functional/translate/cram/vcf-with-root-mutation.t000066400000000000000000000035331456376326500257270ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export SCRIPTS="$TESTDIR/../../../../scripts" $ export ANC_DATA="$TESTDIR/../../ancestral/data/simple-genome" $ export DATA="$TESTDIR/../data/simple-genome" This test is similar to the main `vcf.t` test, however here we introduce a mutation at the root by modifying the VCF file to include a G20A mutation for every sample (i.e. including internal nodes). This introduces a G4E AA change in gene1 which should be described as a mutation on the root of the tree (relative to the provided reference.fasta) $ sed '10s/^/1\t20\t.\tG\tA\t.\t.\t.\tGT\t1\t1\t1\t1\t1\n/' \ > "$DATA/snps-inferred.vcf" > input.vcf $ ${AUGUR} translate \ > --tree "$ANC_DATA/tree.nwk" \ > --ancestral-sequences input.vcf \ > --reference-sequence "$DATA/reference.gff" \ > --output-node-data "aa_muts.json" \ > --alignment-output aa_muts.vcf \ > --vcf-reference "$ANC_DATA/reference.fasta" \ > --vcf-reference-output reference.fasta Read in 3 features from reference sequence file amino acid mutations written to aa_muts.json The _reference_ produced is the actual reference, not using the mutations in the tree (I.e. it's the _parent_ of the tree root, not the actual root) $ cat reference.fasta >gene1 MPCG* >gene2 MVK* (no-eol) However the aa_mutations should annotate the aa_sequence on the root node as having the G3E AA mutation, i.e. MPCE* instead of MPCG*, as well as a corresponding AA mutation on the root node G4E (i.e. reference is G, but root node is E (and so are all the other nodes)) $ sed '46s/MPCG/MPCE/' "$DATA/aa_muts.json" | sed '42s/\[\]/\["G4E"\]/' > aa_muts.truth.json $ python3 "$SCRIPTS/diff_jsons.py" \ > aa_muts.truth.json \ > aa_muts.json \ > --exclude-regex-paths "root\['annotations'\]\['.+'\]\['seqid'\]" "root['meta']['updated']" {}augur-24.2.2/tests/functional/translate/cram/vcf.t000066400000000000000000000027641456376326500221440ustar00rootroot00000000000000Setup $ export AUGUR="${AUGUR:-$TESTDIR/../../../../bin/augur}" $ export SCRIPTS="$TESTDIR/../../../../scripts" $ export ANC_DATA="$TESTDIR/../../ancestral/data/simple-genome" $ export DATA="$TESTDIR/../data/simple-genome" $ ${AUGUR} translate \ > --tree "$ANC_DATA/tree.nwk" \ > --ancestral-sequences "$DATA/snps-inferred.vcf" \ > --reference-sequence "$DATA/reference.gff" \ > --output-node-data "aa_muts.json" \ > --alignment-output aa_muts.vcf \ > --vcf-reference "$ANC_DATA/reference.fasta" \ > --vcf-reference-output reference.fasta Read in 3 features from reference sequence file amino acid mutations written to aa_muts.json $ cat reference.fasta >gene1 MPCG* >gene2 MVK* (no-eol) $ python3 "$SCRIPTS/diff_jsons.py" \ > "$DATA/aa_muts.json" \ > aa_muts.json \ > --exclude-regex-paths "root\['annotations'\]\['.+'\]\['seqid'\]" "root['meta']['updated']" {} ------------------------------ MISSING TEST ---------------------------------- We should diff the `aa_muts.vcf` produced above against that in "${DATA}/aa_muts.vcf" however there are a few subtleties: - The translate-produced VCF uses diploid genotyping, rather than haploid - The meta-lines are different (easy to skip via `grep -v '##'` or similar) See for some additional context and discussion about the suitability of VCFs here. ----------------------------------------------------------------------------------augur-24.2.2/tests/functional/translate/data/000077500000000000000000000000001456376326500211575ustar00rootroot00000000000000augur-24.2.2/tests/functional/translate/data/simple-genome/000077500000000000000000000000001456376326500237205ustar00rootroot00000000000000augur-24.2.2/tests/functional/translate/data/simple-genome/aa_muts.json000066400000000000000000000022651456376326500262510ustar00rootroot00000000000000{ "annotations": { "gene1": { "end": 24, "seqid": "data/reference.gff", "start": 10, "strand": "+", "type": "gene" }, "gene2": { "end": 47, "seqid": "data/reference.gff", "start": 36, "strand": "-", "type": "gene" }, "nuc": { "end": 50, "seqid": "data/reference.gff", "start": 1, "strand": "+", "type": "##sequence-region pragma" } }, "generated_by": { "program": "augur", "version": "23.1.1" }, "nodes": { "node_AB": { "aa_muts": { "gene1": [ "P2L" ], "gene2": [ "V2D" ] } }, "node_root": { "aa_muts": { "gene1": [], "gene2": [] }, "aa_sequences": { "gene1": "MPCG*", "gene2": "MVK*" } }, "sample_A": { "aa_muts": { "gene1": [], "gene2": [] } }, "sample_B": { "aa_muts": { "gene1": [], "gene2": [] } }, "sample_C": { "aa_muts": { "gene1": [], "gene2": [] } } }, "reference": { "gene1": "MPCG*", "gene2": "MVK*" } }augur-24.2.2/tests/functional/translate/data/simple-genome/aa_muts.vcf000066400000000000000000000005171456376326500260540ustar00rootroot00000000000000##fileformat=VCFv4.3 ##source="Manually created (james) to test augur translate with the 'simple-genome' data" ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT node_root node_AB sample_A sample_B sample_C gene1 2 . P L . PASS . GT . 1 1 1 0 gene2 2 . V D . PASS . GT . 1 1 1 0 augur-24.2.2/tests/functional/translate/data/simple-genome/reference.gb000066400000000000000000000010701456376326500261660ustar00rootroot00000000000000LOCUS Simple-genome 50 bp DNA linear VRL 05-DEC-2023 DEFINITION Synthetic genome used for Nextstrain testing KEYWORDS . FEATURES Location/Qualifiers source 1..50 /strain="Nextstrain/Simple-genome" CDS 10..24 /gene="gene1" /translation="MPCG" CDS complement(36..47) /gene="gene2" /translation="MVK" ORIGIN 1 AAAAAAAAAA TGCCCTGCGG GTAAAAAAAA AAAAACTACT TGACCATAAA //augur-24.2.2/tests/functional/translate/data/simple-genome/reference.gff000066400000000000000000000004551456376326500263460ustar00rootroot00000000000000##gff-version 3 ##created by james hadfield for testing NextStrain (December 2023) ##sequence-region reference_name 1 50 reference_name RefSeq region 1 50 . + . ID=reference_name reference_name RefSeq gene 10 24 . + . Name=gene1;gene=gene1 reference_name RefSeq gene 36 47 . - . Name=gene2;gene=gene2 augur-24.2.2/tests/functional/translate/data/simple-genome/snps-inferred.vcf000066400000000000000000000010471456376326500272010ustar00rootroot00000000000000##fileformat=VCFv4.3 ##source="Manually created (james) to match the mutations in ancestral/data/simple-genome/nt_muts.ref-seq.json" ##contig= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT node_root node_AB sample_A sample_B sample_C 1 5 . A C . . . GT 1 1 1 1 1 1 7 . A G . . . GT 0 1 1 1 0 1 14 . C T . . . GT 0 1 1 1 0 1 18 . C T . . . GT 1 0 0 0 1 1 33 . A G,C . . . GT 0 1 2 1 0 1 39 . C T . . . GT 0 0 1 0 0 1 42 . G A . . . GT 0 0 0 1 0 1 43 . A T . . . GT 0 1 1 1 0 augur-24.2.2/tests/functional/translate/data/zika/000077500000000000000000000000001456376326500221155ustar00rootroot00000000000000augur-24.2.2/tests/functional/translate/data/zika/aa_muts_genbank.json000066400000000000000000000056041456376326500261330ustar00rootroot00000000000000{ "annotations": { "nuc": { "end": 10769, "seqid": "translate/data/zika/zika_outgroup.gb", "start": 1, "strand": "+", "type": "source" }, "CA": { "end": 456, "seqid": "translate/data/zika/zika_outgroup.gb", "start": 91, "strand": "+", "type": "CDS" }, "PRO": { "end": 735, "seqid": "translate/data/zika/zika_outgroup.gb", "start": 457, "strand": "+", "type": "CDS" } }, "generated_by": { "program": "augur", "version": "16.0.3" }, "nodes": { "BRA/2016/FC_6706": { "aa_muts": { "CA": [], "PRO": [] } }, "COL/FLR_00008/2015": { "aa_muts": { "CA": [], "PRO": [] } }, "Colombia/2016/ZC204Se": { "aa_muts": { "CA": [], "PRO": [ "N17K" ] } }, "DOM/2016/BB_0183": { "aa_muts": { "CA": [], "PRO": [] } }, "EcEs062_16": { "aa_muts": { "CA": [], "PRO": [] } }, "HND/2016/HU_ME59": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000001": { "aa_muts": { "CA": [ "D107E" ], "PRO": [] } }, "NODE_0000002": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000003": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000004": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000005": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000006": { "aa_muts": { "CA": [], "PRO": [] }, "aa_sequences": { "CA": "MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTAMA", "PRO": "AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR" } }, "NODE_0000007": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000008": { "aa_muts": { "CA": [], "PRO": [] } }, "PAN/CDC_259359_V1_V3/2015": { "aa_muts": { "CA": [], "PRO": [] } }, "PRVABC59": { "aa_muts": { "CA": [ "I80T" ], "PRO": [] } }, "VEN/UF_1/2016": { "aa_muts": { "CA": [ "E76D" ], "PRO": [] } }, "ZKC2/2016": { "aa_muts": { "CA": [ "S109N" ], "PRO": [] } } }, "reference": { "CA": "MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTAMA", "PRO": "AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR" } } augur-24.2.2/tests/functional/translate/data/zika/aa_muts_gff.json000066400000000000000000000052221456376326500252640ustar00rootroot00000000000000{ "annotations": { "CA": { "end": 456, "seqid": "PF13/251013_18", "start": 91, "strand": "+", "type": "gene" }, "PRO": { "end": 735, "seqid": "PF13/251013_18", "start": 457, "strand": "+", "type": "gene" } }, "generated_by": { "program": "augur", "version": "16.0.3" }, "nodes": { "BRA/2016/FC_6706": { "aa_muts": { "CA": [], "PRO": [] } }, "COL/FLR_00008/2015": { "aa_muts": { "CA": [], "PRO": [] } }, "Colombia/2016/ZC204Se": { "aa_muts": { "CA": [], "PRO": [ "N17K" ] } }, "DOM/2016/BB_0183": { "aa_muts": { "CA": [], "PRO": [] } }, "EcEs062_16": { "aa_muts": { "CA": [], "PRO": [] } }, "HND/2016/HU_ME59": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000001": { "aa_muts": { "CA": [ "D107E" ], "PRO": [] } }, "NODE_0000002": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000003": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000004": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000005": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000006": { "aa_muts": {}, "aa_sequences": { "CA": "MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTAMA", "PRO": "AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR" } }, "NODE_0000007": { "aa_muts": { "CA": [], "PRO": [] } }, "NODE_0000008": { "aa_muts": { "CA": [], "PRO": [] } }, "PAN/CDC_259359_V1_V3/2015": { "aa_muts": { "CA": [], "PRO": [] } }, "PRVABC59": { "aa_muts": { "CA": [ "I80T" ], "PRO": [] } }, "VEN/UF_1/2016": { "aa_muts": { "CA": [ "E76D" ], "PRO": [] } }, "ZKC2/2016": { "aa_muts": { "CA": [ "S109N" ], "PRO": [] } } }, "reference": { "CA": "MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTAMA", "PRO": "AEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRR" } } augur-24.2.2/tests/functional/translate/data/zika/nt_muts.json000066400000000000000000006555671456376326500245310ustar00rootroot00000000000000{ "annotations": { "nuc": { "end": 10769, "start": 1, "strand": "+" } }, "mask": "00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000", "nodes": { "BRA/2016/FC_6706": { "muts": [ "T876C", "C2646T", "A4341G", "C5988T", "T6618C", "A7116G", "C7488T", "T7506C", "G8040A", "A8820G", "C9066T", "T9717C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCCGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCTTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCGGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCTAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTCTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAGGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCCGCAACCTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTAGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAGCGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGTCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTCAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "COL/FLR_00008/2015": { "muts": [ "T1506C", "C2977A", "G3347A", "G5655A", "T8445C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGCTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGATCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGAAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACAGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCCGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "Colombia/2016/ZC204Se": { "muts": [ "C507A", "C1233T", "C2163T", "T7843C", "T10332C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAAAGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCATAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGCTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGCGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "DOM/2016/BB_0183": { "muts": [ "T489C", "T2043C", "T2358C", "T2418C", "C2700T", "T2724C", "T2823C", "C2844T", "A3095G", "T3982A", "C5232T", "C5352T", "T5823C", "C6105T", "C6261T", "T6891C", "T8028C", "G8604A", "A8614G", "C9270T", "G9294A", "A9599G", "T10284G", "T10632C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAATGCAATCCTGGAAGAGAATGGAGTCCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCCTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGGCACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCATGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTTATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCGGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCCCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "EcEs062_16": { "muts": [ "T1275C", "T1858C", "T2409C", "A2754G", "A3780G", "G4971T", "C5532T", "G5751A", "G6453C", "A6873G", "C8232A", "T8553C", "C8850T", "A9420G", "G9933T", "C10098T", "A10347G", "T10372C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGCGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGACTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCCATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAGAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAGGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCTGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCTATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAACTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCCGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTGGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACACTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATACAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTTATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACGGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCTCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAATAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACGCCTGGAGTGCTGTAAGCACCAATCCTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "HND/2016/HU_ME59": { "muts": [ "G2771C", "G3600A", "G3846A", "T4716C", "G4767A", "T4888C", "G5178A", "A6310C", "T6708C", "C6720T", "A6945G", "C9223T", "T9516C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGCTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTAAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTACTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCACTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCCTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTACATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATACTGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACCCTTGGGGCCAGTGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTGATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTTGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATCCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000001": { "muts": [ "T411A", "T738C", "C858T", "G864T", "C1381T", "C3442T", "A3894G", "C5991T", "C9279T", "A10147G" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000002": { "muts": [ "A3517G", "G6966A" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000003": { "muts": [ "T2517C", "C3972T" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000004": { "muts": [ "A5298G" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000005": { "muts": [], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000006": { "muts": [], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000007": { "muts": [ "T1029C", "T3705C" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "NODE_0000008": { "muts": [ "G2895A", "T3804C", "C4311T", "T4605G", "C6643T", "T8862G" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "PAN/CDC_259359_V1_V3/2015": { "muts": [ "G23A", "A35T", "G40A", "T2538C", "A3750G", "G3771A", "G4302A", "C7056T", "T10344C" ], "sequence": "GAATCAGACTGCGACAGTTCGAATTTGAAGCGAATGCTAACAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTACAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTGGCTCATCTGGCGCTGATAGCAGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATAGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCTGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCCACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "PRVABC59": { "muts": [ "T329C", "T762C", "G1170T", "G1458A", "A1482G", "C1887T", "C2838T", "T3549C", "T3576C", "C4866T", "T5070C", "T5139C", "T6612A", "T6654C", "T7077C", "T7134C", "C7488T", "C7922T", "T8835C", "T9000C", "C9225T", "C9279T" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAACAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACCAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCTGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAAGTTGAGATAACGCCCAATTCACCGAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACTGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTATTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGACCACTTCTCCCTTGGAGTGCTTGTGATCCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGATGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAACGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCCTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATAATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTCTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACCTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGCATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGTCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGCACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGCTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGTATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "VEN/UF_1/2016": { "muts": [ "A3C", "G318T", "G438T", "C1233T", "C1416T", "A3373C", "C8016T", "G10147A" ], "sequence": "GACTCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGATGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTCGGAATTGTTGGCCTCCTTCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGTTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATTGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCACCCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAATATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" }, "ZKC2/2016": { "muts": [ "T249C", "G416A", "C789T", "A1158G", "T2032C", "T2076C", "A2216G", "C2637T", "T3321C", "G3443A", "C3501T", "C4428T", "T4602A", "A4671G", "T4740C", "T5286C", "T5676C", "T6405C", "C6475T", "T7026C", "G7230A", "C7500T", "G7990A", "C8145T", "T8391C", "T8652C", "C8748T", "A9417G", "A9521G", "T9595C", "A9659G", "A9711G", "A9768G", "A10375G", "C10596T" ], "sequence": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTCTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAATGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACTTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGCTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCCAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAGGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACCAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCAGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTTGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGAGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTGATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACCATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCCGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTCTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCACGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCTTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTACGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTAGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCTGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTTTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGACGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGATCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAGTATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGCTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAGGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAGGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTTAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" } }, "reference": { "nuc": "GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTTATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGATTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTGAAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATTCTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGTTCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCCATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTCGGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGTGCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACATTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACCATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGGTGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCACGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGGTCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGGATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGCTCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGCATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGGGTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACTGTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGCTATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCCTACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGCTGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCATGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATGCTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACTGATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTGGGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGATTTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGACATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAAGCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGTCAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCAAAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTGAAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAAACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAGGTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACCGCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCACCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGGCACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGAATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCATTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATGTCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAGAATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACAGCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGTACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCTGACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGGATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAACGCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCCATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAGGCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGATGGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAGGATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCATTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGTGATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCATCTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATAGAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACCAGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGGTTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCATCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGCACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGGCCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGATCACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTGAAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATGATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACCTTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAAGTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGCATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGACCTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTTCCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGCACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCTCTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACCGCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGGAAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCTGGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTAATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGACATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTAGATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATACTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCTGGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCTGCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGTAGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACTATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATACTGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCCTGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAACATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTGGATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGACTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGGAGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAGCTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATAGTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTCGCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTCAATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCACGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCACTTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGCGAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGACTCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGCTTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAACGGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGAAAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACAACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGATGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTCACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGAGATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTTGAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTATCGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAAAGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAGGTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAACAACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGAGTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCATTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGAACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTCATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACCCTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTCTTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGCGCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTTGTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGACAACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAATGAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAGGAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCCATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCATACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGCAAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTACTCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATGTACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCTGGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACAATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCCAGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCCGCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACTTCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTAACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAGAAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCAGGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACGGGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATACCTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTACGCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCATGAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTGGACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCATCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGATTGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACTATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCACTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATAAAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCAGTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCTGAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCGGAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTATGAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCAAAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTATGGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGCACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAACGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTAGGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCAAGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGTTGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAGGGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTTGGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGGCTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGGATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAATGAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATCAAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACAGTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCTCTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTTCTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAGAGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAGCCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGGAAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTTTGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGCCGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATCCGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCACAGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTTCCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGACATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACCCCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGATCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAACATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTTCGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTGTCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGAGAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATGCTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAGGATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATCAGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAACAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCAGGCACAGATCGCCGAATAGCGGCGGCCGG" } } augur-24.2.2/tests/functional/translate/data/zika/tree.nwk000066400000000000000000000007311456376326500235760ustar00rootroot00000000000000((Colombia/2016/ZC204Se:0.00105368,(PAN/CDC_259359_V1_V3/2015:0.00076051,(COL/FLR_00008/2015:0.00044440,VEN/UF_1/2016:0.00089377)NODE_0000008:0.00038502)NODE_0000007:0.00019253)NODE_0000001:0.00080159,(BRA/2016/FC_6706:0.00214920,(ZKC2/2016:0.00173693,(HND/2016/HU_ME59:0.00206150,PRVABC59:0.00135309)NODE_0000004:0.00013537,(EcEs062_16:0.00175918,DOM/2016/BB_0183:0.00184905)NODE_0000002:0.00021565)NODE_0000003:0.00013737)NODE_0000005:0.00019772)NODE_0000006:0.00100000; augur-24.2.2/tests/functional/translate/data/zika/zika_outgroup.gb000066400000000000000000000520151456376326500253340ustar00rootroot00000000000000LOCUS PF13/251013_18 10769 bp DNA VRL 05-JUL-2016 DEFINITION Zika virus strain PF13/251013-18, complete genome. ACCESSION KX369547 VERSION KX369547.1 GI:1040461413 KEYWORDS . SOURCE Zika virus ORGANISM Zika virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Flaviviridae; Flavivirus. REFERENCE 1 (bases 1 to 10769) AUTHORS Troesemeier,J.-H., Musso,D., Bluemel,J. and Baylis,S.A. TITLE Genome sequence of a candidate World Health Organization reference strain for Zika virus for nucleic acid testing JOURNAL Unpublished REFERENCE 2 (bases 1 to 10769) AUTHORS Troesemeier,J.-H., Musso,D., Bluemel,J. and Baylis,S.A. TITLE Direct Submission JOURNAL Submitted (08-JUN-2016) Microbiology, Paul-Ehrlich-Institute, Paul-Ehrlich-Str. 51-59, Langen, Hessen 63225, Germany COMMENT ##Assembly-Data-START## Assembly Method :: MIRA v. 4.0.2; BWA v. 0.7.13 Coverage :: 120 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..10769 /collection_date="25-Oct-2013" /country="French Polynesia" /db_xref="taxon:64320" /host="Homo sapiens" /isolation_source="serum" /mol_type="genomic RNA" /organism="Zika virus" /strain="PF13/251013-18" 5'UTR 1..90 CDS 91..10362 /codon_start=1 /db_xref="GI:1040461414" /product="polyprotein" /protein_id="ANN44857.1" /translation="MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIR MVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRR GADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDL GHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVTLPSH STRKLQTRSQTWLESREYTKHLIRVENWIFRNPGLALAAAAIAWLLGSSTSQKVIYLVM ILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLEHGGCVTVMAQDKPTVDIELVTTTV SNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKQSDTQYVCKRTLVDRGWGNGCGLFG KGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVE ITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHA GADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSS GHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQM AVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSG STIGKAFEATVRGAKRMAVLGDTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWF SQILIGTLLMWLGLNTKNGSISLMCLALGGVLIFLSTAVSADVGCSVDFSKKETRCGTG VFVYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEDGICGISSVSRMENIMWRSVEGELNA ILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGKSYFVRAAKTNNSFVVD GDTLKECPLEHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECDPAVIGTAVKGKEAVH SDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGIEESDLIIPKSLAGPLSHH NTREGYRTQMKGPWHSEELEIRFEECPGTKVHVEETCGTRGPSLRSTTASGRVIEEWCC RECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTAGSTDHMDHFSLGVLVILLMV QEGLKKRMTTKIIISTSMAVLVAMILGGFSMSDLAKLAILMGATFAEMNTGGDVAHLAL IAAFKVRPALLVSFIFRANWTPRESMLLALASCLLQTAISALEGDLMVLINGFALAWLA IRAMVVPRTDNITLAILAALTPLARGTLLVAWRAGLATCGGFMLLSLKGKGSVKKNLPF VMALGLTAVRLVDPINVVGLLLLTRSGKRSWPPSEVLTAVGLICALAGGFAKADIEMAG PMAAVGLLIVSYVVSGKSVDMYIERAGDITWEKDAEVTGNSPRLDVALDESGDFSLVED DGPPMREIILKVVLMTICGMNPIAIPFAAGAWYVYVKTGKRSGALWDVPAPKEVKKGET TDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGSALRSGEGRLDPYWGDVKQDLV SYCGPWKLDAAWDGHSEVQLLAVPPGERARNIQTLPGIFKTKDGDIGAVALDYPAGTSG SPILDKCGRVIGLYGNGVVIKNGSYVSAITQGRREEETPVECFEPSMLKKKQLTVLDLH PGAGKTRRVLPEIVREAIKTRLRTVILAPTRVVAAEMEEALRGLPVRYMTTAVNVTHSG TEIVDLMCHATFTSRLLQPIRVPNYNLYIMDEAHFTDPSSIAARGYISTRVEMGEAAAI FMTATPPGTRDAFPDSNSPIMDTEVEVPERAWSSGFDWVTDHSGKTVWFVPSVRNGNEI AACLTKAGKRVIQLSRKTFETEFQKTKHQEWDFVVTTDISEMGANFKADRVIDSRRCLK PVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYLYGGGCAETDEDHAHWLEA RMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQV ASAGITYTDRRWCFDGTTNNTIMEDSVPAEVWTRHGEKRVLKPRWMDARVCSDHAALKS FKEFAAGKRGAAFGVMEALGTLPGHMTERFQEAIDNLAVLMRAETGSRPYKAAAAQLPE TLETIMLLGLLGTVSLGIFFVLMRNKGIGKMGFGMVTLGASAWLMWLSEIEPARIACVL IVVFLLLVVLIPEPEKQRSPQDNQMAIIIMVAVGLLGLITANELGWLERTKSDLSHLMG RREEGATIGFSMDIDLRPASAWAIYAALTTFITPAVQHAVTTSYNNYSLMAMATQAGVL FGMGKGMPFYAWDFGVPLLMIGCYSQLTPLTLIVAIILLVAHYMYLIPGLQAAAARAAQ KRTAAGIMKNPVVDGIVVTDIDTMTIDPQVEKKMGQVLLIAVAVSSAILSRTAWGWGEA GALITAATSTLWEGSPNKYWNSSTATSLCNIFRGSYLAGASLIYTVTRNAGLVKRRGGG TGETLGEKWKARLNQMSALEFYSYKKSGITEVCREEARRALKDGVATGGHAVSRGSAKL RWLVERGYLQPYGKVIDLGCGRGGWSYYAATIRKVQEVKGYTKGGPGHEEPMLVQSYGW NIVRLKSGVDVFHMAAEPCDTLLCDIGESSSSPEVEEARTLRVLSMVGDWLEKRPGAFC IKVLCPYTSTMMETLERLQRRYGGGLVRVPLSRNSTHEMYWVSGAKSNTIKSVSTTSQL LLGRMDGPRRPVKYEEDVNLGSGTRAVVSCAEAPNMKIIGNRIERIRSEHAETWFFDEN HPYRTWAYHGSYEAPTQGSASSLINGVVRLLSKPWDVVTGVTGIAMTDTTPYGQQRVFK EKVDTRVPDPQEGTRQVMSMVSSWLWKELGKHKRPRVCTKEEFINKVRSNAALGAIFEE EKEWKTAVEAVNDPRFWALVDKEREHHLRGECQSCVYNMMGKREKKQGEFGKAKGSRAI WYMWLGARFLEFEALGFLNEDHWMGRENSGGGVEGLGLQRLGYVLEEMSRIPGGRMYAD DTAGWDTRISRFDLENEALITNQMEKGHRALALAIIKYTYQNKVVKVLRPAEKGKTVMD IISRQDQRGSGQVVTYALNTFTNLVVQLIRNMEAEEVLEMQDLWLLRRSEKVTNWLQSN GWDRLKRMAVSGDDCVVKPIDDRFAHALRFLNDMGKVRKDTQEWKPSTGWDNWEEVPFC SHHFNKLHLKDGRSIVVPCRHQDELIGRARVSPGAGWSIRETACLAKSYAQMWQLLYFH RRDLRLMANAICSSVPVDWVPTGRTTWSIHGKGEWMTTEDMLVVWNRVWIEENDHMEDK TPVTKWTDIPYLGKREDLWCGSLIGHRPRTTWAENIKNTVNMVRRIIGDEEKYMDYLST QVRYLGEEGSTPGVL" CDS 91..456 /product="capsid protein" /gene="CA" CDS 457..735 /product="propeptide" /gene="PRO" CDS 736..960 /product="membrane protein" /gene="MP" CDS 961..2472 /product="envelope protein" /gene="ENV" CDS 2473..3528 /product="NS1" /gene="NS1" CDS 3529..4206 /product="NS2A" /gene="NS2A" CDS 4207..4596 /product="NS2B" /gene="NS2B" CDS 4597..6447 /product="NS3" /gene="NS3" CDS 6448..6828 /product="NS4A" /gene="NS4A" CDS 6829..6897 /product="2K" /gene="2K" CDS 6898..7650 /product="NS4B" /gene="NS4B" CDS 7651..10359 /product="NS5" /gene="NS5" 3'UTR 10360..10769 ORIGIN 1 gaatcagact gcgacagttc gagtttgaag cgaaagctag caacagtatc aacaggtttt 61 atttggattt ggaaacgaga gtttctggtc atgaaaaacc caaaaaagaa atccggagga 121 ttccggattg tcaatatgct aaaacgcgga gtagcccgtg tgagcccctt tgggggcttg 181 aagaggctgc cagccggact tctgctgggt catgggccca tcaggatggt cttggcgatt 241 ctagcctttt tgagattcac ggcaatcaag ccatcactgg gtctcatcaa tagatggggt 301 tcagtgggga aaaaagaggc tatggaaata ataaagaagt tcaagaaaga tctggctgcc 361 atgctgagaa taatcaatgc taggaaggag aagaagagac gaggcgcaga tactagtgtc 421 ggaattgttg gcctcctgct gaccacagct atggcagcgg aggtcactag acgtgggagt 481 gcatactata tgtacttgga cagaaacgat gctggggagg ccatatcttt tccaaccaca 541 ttggggatga ataagtgtta tatacagatc atggatcttg gacacatgtg tgatgccacc 601 atgagctatg aatgccctat gctggatgag ggggtggaac cagatgacgt cgattgttgg 661 tgcaacacga cgtcaacttg ggttgtgtac ggaacctgcc atcacaaaaa aggtgaagca 721 cggagatcta gaagagctgt gacgctcccc tcccattcca ctagaaagct gcaaacgcgg 781 tcgcaaacct ggttggaatc aagagaatac acaaagcact tgattagagt cgaaaattgg 841 atattcagga accctggcct cgcgttagca gcagctgcca tcgcttggct tttgggaagc 901 tcaacgagcc aaaaagtcat atacttggtc atgatactgc tgattgcccc ggcatacagc 961 atcaggtgca taggagtcag caatagggac tttgtggaag gtatgtcagg tgggacttgg 1021 gttgatgttg tcttggaaca tggaggttgt gtcaccgtaa tggcacagga caaaccgact 1081 gtcgacatag agctggttac aacaacagtc agcaacatgg cggaggtaag atcctactgc 1141 tatgaggcat caatatcaga catggcttcg gacagccgct gcccaacaca aggtgaagcc 1201 taccttgaca agcaatcaga cactcaatat gtctgcaaaa gaacgttagt ggacagaggc 1261 tggggaaatg gatgtggact ttttggcaaa gggagcctgg tgacatgcgc taagtttgca 1321 tgctccaaga aaatgaccgg gaagagcatc cagccagaga atctggagta ccggataatg 1381 ctgtcagttc atggctccca gcacagtggg atgatcgtta atgacacagg acatgaaact 1441 gatgagaata gagcgaaggt tgagataacg cccaattcac caagagccga agccaccctg 1501 gggggttttg gaagcctagg acttgattgt gaaccgagga caggccttga cttttcagat 1561 ttgtattact tgactatgaa taacaagcac tggttggttc acaaggagtg gttccacgac 1621 attccattac cttggcacgc tggggcagac accggaactc cacactggaa caacaaagaa 1681 gcactggtag agttcaagga cgcacatgcc aaaaggcaaa ctgtcgtggt tctagggagt 1741 caagaaggag cagttcacac ggcccttgct ggagctctgg aggctgagat ggatggtgca 1801 aagggaaggc tgtcctctgg ccacttgaaa tgtcgcctga aaatggataa acttagattg 1861 aagggcgtgt catactcctt gtgtaccgca gcgttcacat tcaccaagat cccggctgaa 1921 acactgcacg ggacagtcac agtggaggta cagtacgcag ggacagatgg accttgcaag 1981 gttccagctc agatggcggt ggacatgcaa actctgaccc cagttgggag gttgataacc 2041 gctaaccccg taatcactga aagcactgag aactctaaga tgatgctgga acttgatcca 2101 ccatttgggg actcttacat tgtcatagga gtcggggaga agaagatcac ccaccactgg 2161 cacaggagtg gcagcaccat tggaaaagca tttgaagcca ctgtgagagg tgccaagaga 2221 atggcagtct tgggagacac agcctgggac tttggatcag ttggaggcgc tctcaactca 2281 ttgggcaagg gcatccatca aatttttgga gcagctttca aatcattgtt tggaggaatg 2341 tcctggttct cacaaattct cattggaacg ttgctgatgt ggttgggtct gaacacaaag 2401 aatggatcta tttcccttat gtgcttggcc ttagggggag tgttgatctt cttatccaca 2461 gccgtctctg ctgatgtggg gtgctcggtg gacttctcaa agaaggagac gagatgcggt 2521 acaggggtgt tcgtctataa cgacgttgaa gcctggaggg acaggtacaa gtaccatcct 2581 gactcccccc gtagattggc agcagcagtc aagcaagcct gggaagatgg tatctgtggg 2641 atctcctctg tttcaagaat ggaaaacatc atgtggagat cagtagaagg ggagctcaac 2701 gcaatcctgg aagagaatgg agttcaactg acggtcgttg tgggatctgt aaaaaacccc 2761 atgtggagag gtccacagag attgcccgtg cctgtgaacg agctgcccca cggctggaag 2821 gcttggggga aatcgtactt cgtcagagca gcaaagacaa ataacagctt tgtcgtggat 2881 ggtgacacac tgaaggaatg cccactcgaa catagagcat ggaacagctt tcttgtggag 2941 gatcatgggt tcggggtatt tcacactagt gtctggctca aggttagaga agattattca 3001 ttagagtgtg atccagccgt tattggaaca gctgttaagg gaaaggaggc tgtacacagt 3061 gatctaggct actggattga gagtgagaag aatgacacat ggaggctgaa gagggcccat 3121 ctgatcgaga tgaaaacatg tgaatggcca aagtcccaca cattgtggac agatggaata 3181 gaagagagtg atctgatcat acccaagtct ttagctgggc cactcagcca tcacaatacc 3241 agagagggct acaggaccca aatgaaaggg ccatggcaca gtgaagagct tgaaattcgg 3301 tttgaggaat gcccaggcac taaggtccac gtggaggaaa catgtggaac aagaggacca 3361 tctctgagat caaccactgc aagcggaagg gtgatcgagg aatggtgctg cagggagtgc 3421 acaatgcccc cactgtcgtt ccgggctaaa gatggctgtt ggtatggaat ggagataagg 3481 cccaggaaag aaccagaaag taacttagta aggtcaatgg tgactgcagg atcaactgat 3541 cacatggatc acttctccct tggagtgctt gtgattctgc tcatggtgca ggaagggctg 3601 aagaagagaa tgaccacaaa gatcatcata agcacatcaa tggcagtgct ggtagctatg 3661 atcctgggag gattttcaat gagtgacctg gctaagcttg caattttgat gggtgccacc 3721 ttcgcggaaa tgaacactgg aggagatgta gctcatctgg cgctgatagc ggcattcaaa 3781 gtcagaccag cgttgctggt atctttcatc ttcagagcta attggacacc ccgtgaaagc 3841 atgctgctgg ccttggcctc gtgtcttttg caaactgcga tctccgcctt ggaaggcgac 3901 ctgatggttc tcatcaatgg ttttgctttg gcctggttgg caatacgagc gatggttgtt 3961 ccacgcactg ataacatcac cttggcaatc ctggctgctc tgacaccact ggcccggggc 4021 acactgcttg tggcgtggag agcaggcctt gctacttgcg gggggtttat gctcctctct 4081 ctgaagggaa aaggcagtgt gaagaagaac ttaccatttg tcatggccct gggactaacc 4141 gctgtgaggc tggtcgaccc catcaacgtg gtgggactgc tgttgctcac aaggagtggg 4201 aagcggagct ggccccctag cgaagtactc acagctgttg gcctgatatg cgcattggct 4261 ggagggttcg ccaaggcaga tatagagatg gctgggccca tggccgcggt cggtctgcta 4321 attgtcagtt acgtggtctc aggaaagagt gtggacatgt acattgaaag agcaggtgac 4381 atcacatggg aaaaagatgc ggaagtcact ggaaacagtc cccggctcga tgtggcgcta 4441 gatgagagtg gtgatttctc cctggtggag gatgacggtc cccccatgag agagatcata 4501 ctcaaggtgg tcctgatgac catctgtggc atgaacccaa tagccatacc ctttgcagct 4561 ggagcgtggt acgtatacgt gaagactgga aaaaggagtg gtgctctatg ggatgtgcct 4621 gctcccaagg aagtaaaaaa gggggagacc acagatggag tgtacagagt aatgactcgt 4681 agactgctag gttcaacaca agttggagtg ggagttatgc aagagggggt ctttcacact 4741 atgtggcacg tcacaaaagg atccgcgctg agaagcggtg aagggagact tgatccatac 4801 tggggagatg tcaagcagga tctggtgtca tactgtggtc catggaagct agatgccgcc 4861 tgggacgggc acagcgaggt gcagctcttg gccgtgcccc ccggagagag agcgaggaac 4921 atccagactc tgcccggaat atttaagaca aaggatgggg acattggagc ggttgcgctg 4981 gattacccag caggaacttc aggatctcca atcctagaca agtgtgggag agtgatagga 5041 ctttatggca atggggtcgt gatcaaaaat gggagttatg ttagtgccat cacccaaggg 5101 aggagggagg aagagactcc tgttgagtgc ttcgagcctt cgatgctgaa gaagaagcag 5161 ctaactgtct tagacttgca tcctggagct gggaaaacca ggagagttct tcctgaaata 5221 gtccgtgaag ccataaaaac aagactccgt actgtgatct tagctccaac cagggttgtc 5281 gctgctgaaa tggaggaagc ccttagaggg cttccagtgc gttatatgac aacagcagtc 5341 aatgtcaccc actctggaac agaaatcgtc gacttaatgt gccatgccac cttcacttca 5401 cgtctactac agccaatcag agtccccaac tataatctgt atattatgga tgaggcccac 5461 ttcacagatc cctcaagtat agcagcaaga ggatacattt caacaagggt tgagatgggc 5521 gaggcggctg ccatcttcat gaccgccacg ccaccaggaa cccgtgacgc atttccggac 5581 tccaactcac caattatgga caccgaagtg gaagtcccag agagagcctg gagctcaggc 5641 tttgattggg tgacggatca ttctggaaaa acagtttggt ttgttccaag cgtgaggaac 5701 ggcaatgaga tcgcagcttg tctgacaaag gctggaaaac gggtcataca gctcagcaga 5761 aagacttttg agacagagtt ccagaaaaca aaacatcaag agtgggactt tgtcgtgaca 5821 actgacattt cagagatggg cgccaacttt aaagctgacc gtgtcataga ttccaggaga 5881 tgcctaaagc cggtcatact tgatggcgag agagtcattc tggctggacc catgcctgtc 5941 acacatgcca gcgctgccca gaggaggggg cgcataggca ggaatcccaa caaacctgga 6001 gatgagtatc tgtatggagg tgggtgcgca gagactgacg aagaccatgc acactggctt 6061 gaagcaagaa tgctccttga caatatttac ctccaagatg gcctcatagc ctcgctctat 6121 cgacctgagg ccgacaaagt agcagccatt gagggagagt tcaagcttag gacggagcaa 6181 aggaagacct ttgtggaact catgaaaaga ggagatcttc ctgtttggct ggcctatcag 6241 gttgcatctg ccggaataac ctacacagat agaagatggt gctttgatgg cacgaccaac 6301 aacaccataa tggaagacag tgtgccggca gaggtgtgga ccagacacgg agagaaaaga 6361 gtgctcaaac cgaggtggat ggacgccaga gtttgttcag atcatgcggc cctgaagtca 6421 ttcaaggagt ttgccgctgg gaaaagagga gcggcttttg gagtgatgga agccctggga 6481 acactgccag gacacatgac agagagattc caggaagcca ttgacaacct cgctgtgctc 6541 atgcgggcag agactggaag caggccttac aaagccgcgg cggcccaatt gccggagacc 6601 ctagagacca ttatgctttt ggggttgctg ggaacagtct cgctgggaat ctttttcgtc 6661 ttgatgagga acaagggcat agggaagatg ggctttggaa tggtgactct tggggccagc 6721 gcatggctca tgtggctctc ggaaattgag ccagccagaa ttgcatgtgt cctcattgtt 6781 gtgttcctat tgctggtggt gctcatacct gagccagaaa agcaaagatc tccccaggac 6841 aaccaaatgg caatcatcat catggtagca gtaggtcttc tgggcttgat taccgccaat 6901 gaactcggat ggttggagag aacaaagagt gacctaagcc atctaatggg aaggagagag 6961 gagggggcaa ccataggatt ctcaatggac attgacctgc ggccagcctc agcttgggcc 7021 atctatgctg ccttgacaac tttcattacc ccagccgtcc aacatgcagt gaccacttca 7081 tacaacaact actccttaat ggcgatggcc acgcaagctg gagtgttgtt tggtatgggc 7141 aaagggatgc cattctacgc atgggacttt ggagtcccgc tgctaatgat aggttgctac 7201 tcacaattaa cacccctgac cctaatagtg gccatcattt tgctcgtggc gcactacatg 7261 tacttgatcc cagggctgca ggcagcagct gcgcgtgctg cccagaagag aacggcagct 7321 ggcatcatga agaaccctgt tgtggatgga atagtggtga ctgacattga cacaatgaca 7381 attgaccccc aagtggagaa aaagatggga caggtgctac tcatagcagt agccgtctcc 7441 agcgccatac tgtcgcggac cgcctggggg tggggggagg ctggggccct gatcacagct 7501 gcaacttcca ctttgtggga aggctctccg aacaagtact ggaactcctc tacagccact 7561 tcactgtgta acatttttag gggaagttac ttggctggag cttctctaat ctacacagta 7621 acaagaaacg ctggcttggt caagagacgt gggggtggaa caggagagac cctgggagag 7681 aaatggaagg cccgcttgaa ccagatgtcg gccctggagt tctactccta caaaaagtca 7741 ggcatcaccg aggtgtgcag agaagaggcc cgccgcgccc tcaaggacgg tgtggcaacg 7801 ggaggccatg ctgtgtcccg aggaagtgca aagctgagat ggttggtgga gcggggatac 7861 ctgcagccct atggaaaggt cattgatctt ggatgtggca gagggggctg gagttactac 7921 gccgccacca tccgcaaagt tcaagaagtg aaaggataca caaaaggagg ccctggtcat 7981 gaagaaccca tgttggtgca aagctatggg tggaacatag tccgtcttaa gagtggggtg 8041 gacgtctttc atatggcggc tgagccgtgt gacacgttgc tgtgtgacat aggtgagtca 8101 tcatctagtc ctgaagtgga agaagcacgg acgctcagag tcctctccat ggtgggggat 8161 tggcttgaaa aaagaccagg agccttttgt ataaaagtgt tgtgcccata caccagcact 8221 atgatggaaa ccctggagcg actgcagcgt aggtatgggg gaggactggt cagagtgcca 8281 ctctcccgca actctacaca tgagatgtac tgggtctctg gagcgaaaag caacaccata 8341 aaaagtgtgt ccaccacgag ccagctcctc ttggggcgca tggacgggcc caggaggcca 8401 gtgaaatatg aggaggatgt gaatctcggc tctggcacgc gggctgtggt aagctgcgct 8461 gaagctccca acatgaagat cattggtaac cgcattgaaa ggatccgcag tgagcacgcg 8521 gaaacgtggt tctttgacga gaaccaccca tataggacat gggcttacca tggaagctat 8581 gaggccccca cacaagggtc agcgtcctct ctaataaacg gggttgtcag gctcctgtca 8641 aaaccctggg atgtggtgac tggagtcaca ggaatagcca tgaccgacac cacaccgtat 8701 ggtcagcaaa gagttttcaa ggaaaaagtg gacactaggg tgccagaccc ccaagaaggc 8761 actcgtcagg ttatgagcat ggtctcttcc tggttgtgga aagagctagg caaacacaaa 8821 cggccacgag tctgtaccaa agaagagttc atcaacaagg ttcgtagcaa tgcagcatta 8881 ggggcaatat ttgaagagga aaaagagtgg aagactgcag tggaagctgt gaacgatcca 8941 aggttctggg ctctagtgga caaggaaaga gagcaccacc tgagaggaga gtgccagagt 9001 tgtgtgtaca acatgatggg aaaaagagaa aagaaacaag gggaatttgg aaaggccaag 9061 ggcagccgcg ccatctggta tatgtggcta ggggctagat ttctagagtt cgaagccctt 9121 ggattcttga acgaggatca ctggatgggg agagagaact caggaggtgg tgttgaaggg 9181 ctgggattac aaagactcgg atatgtccta gaagagatga gtcgcatacc aggaggaagg 9241 atgtatgcag atgacactgc tggctgggac acccgcatca gcaggtttga tctggagaat 9301 gaagctctaa tcaccaacca aatggagaaa gggcacaggg ccttggcatt ggccataatc 9361 aagtacacat accaaaacaa agtggtaaag gtccttagac cagctgaaaa agggaagaca 9421 gttatggaca ttatttcgag acaagaccaa agggggagcg gacaagttgt cacttacgct 9481 cttaacacat ttaccaacct agtggtgcaa ctcattcgga atatggaggc tgaggaagtt 9541 ctagagatgc aagacttgtg gctgctgcgg aggtcagaga aagtgaccaa ctggttgcag 9601 agcaacggat gggataggct caaacgaatg gcagtcagtg gagatgattg cgttgtgaag 9661 ccaattgatg ataggtttgc acatgccctc aggttcttga atgatatggg aaaagttagg 9721 aaggacacac aagagtggaa accctcaact ggatgggaca actgggaaga agttccgttt 9781 tgctcccacc acttcaacaa gctccatctc aaggacggga ggtccattgt ggttccctgc 9841 cgccaccaag atgaactgat tggccgggcc cgcgtctctc caggggcggg atggagcatc 9901 cgggagactg cttgcctagc aaaatcatat gcgcaaatgt ggcagctcct ttatttccac 9961 agaagggacc tccgactgat ggccaatgcc atttgttcat ctgtgccagt tgactgggtt 10021 ccaactggga gaactacctg gtcaatccat ggaaagggag aatggatgac cactgaagac 10081 atgcttgtgg tgtggaacag agtgtggatt gaggagaacg accacatgga agacaagacc 10141 ccagttacga aatggacaga cattccctat ttgggaaaaa gggaagactt gtggtgtgga 10201 tctctcatag ggcacagacc gcgcaccacc tgggctgaga acattaaaaa cacagtcaac 10261 atggtgcgca ggatcatagg tgatgaagaa aagtacatgg actacctatc cacccaagtt 10321 cgctacttgg gtgaagaagg gtctacacct ggagtgctgt aagcaccaat cttagtgttg 10381 tcaggcctgc tagtcagcca cagcttgggg aaagctgtgc agcctgtgac ccccccagga 10441 gaagctggga aaccaagcct atagtcaggc cgagaacgcc atggcacgga agaagccatg 10501 ctgcctgtga gcccctcaga ggacactgag tcaaaaaacc ccacgcgctt ggaggcgcag 10561 gatgggaaaa gaaggtggcg accttcccca cccttcaatc tggggcctga actggagatc 10621 agctgtggat ctccagaaga gggactagtg gttagaggag accccccgga aaacgcaaaa 10681 cagcatattg acgctgggaa agaccagaga ctccatgagt ttccaccacg ctggccgcca 10741 ggcacagatc gccgaatagc ggcggccgg // augur-24.2.2/tests/functional/tree.t000066400000000000000000000041601456376326500173760ustar00rootroot00000000000000Integration tests for augur tree. $ pushd "$TESTDIR" > /dev/null $ export AUGUR="${AUGUR:-../../bin/augur}" Try building a tree with IQ-TREE. $ ${AUGUR} tree \ > --alignment tree/aligned.fasta \ > --method iqtree \ > --output "$TMP/tree_raw.nwk" \ > --nthreads 1 > /dev/null Try building a tree with IQ-TREE with more threads (4) than there are input sequences (3). $ ${AUGUR} tree \ > --alignment tree/aligned.fasta \ > --method iqtree \ > --output "$TMP/tree_raw.nwk" \ > --nthreads 4 > /dev/null Try building a tree with IQ-TREE using its ModelTest functionality, by supplying a substitution model of "auto". $ ${AUGUR} tree \ > --alignment tree/aligned.fasta \ > --method iqtree \ > --substitution-model auto \ > --output "$TMP/tree_raw.nwk" \ > --nthreads 1 > /dev/null Build a tree with excluded sites using a compressed input file. $ ${AUGUR} tree \ > --alignment tree/aligned.fasta.xz \ > --exclude-sites tree/excluded_sites.txt \ > --output "$TMP/tree_raw.nwk" &> /dev/null Build a tree, augmenting existing default arguments with custom arguments. $ ${AUGUR} tree \ > --method iqtree \ > --alignment tree/aligned.fasta \ > --tree-builder-args="-czb" \ > --output "$TMP/tree_raw.nwk" > /dev/null Build a tree, replacing existing default arguments with custom arguments. Since the following custom arguments are incompatible with the default IQ-TREE arguments, this command will only work with the `--override-default-args` flag. $ ${AUGUR} tree \ > --method iqtree \ > --alignment tree/full_aligned.fasta \ > --tree-builder-args="-czb -bb 1000 -bnni" \ > --override-default-args \ > --output "$TMP/tree_raw.nwk" > /dev/null Build a tree with an input file that doesn't end in .fasta, and ensure it's not overwritten. $ ${AUGUR} tree \ > --alignment tree/aligned.fa \ > --method iqtree \ > --output "$TMP/tree_raw.nwk" \ > --nthreads 1 > /dev/null $ sha256sum tree/aligned.fa 169a9f5f70b94e26a2c4ab2b3180d4b463112581438515557a9797adc834863d tree/aligned.fa Clean up tree log files. $ rm -f tree/*.log $ popd > /dev/null augur-24.2.2/tests/functional/tree/000077500000000000000000000000001456376326500172105ustar00rootroot00000000000000augur-24.2.2/tests/functional/tree/aligned.fa000066400000000000000000001002431456376326500211230ustar00rootroot00000000000000>KX369547.1 Zika virus strain PF13/251013-18, complete genome GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGAAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCCTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCGAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >1_0087_PF NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCATTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCGATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAAATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >1_0181_PF NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGAAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTAAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCCTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN augur-24.2.2/tests/functional/tree/aligned.fasta000066400000000000000000001002431456376326500216330ustar00rootroot00000000000000>KX369547.1 Zika virus strain PF13/251013-18, complete genome GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGAAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCCTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCGAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >1_0087_PF NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCATTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCGATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAAATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >1_0181_PF NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGAAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTAAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCCTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN augur-24.2.2/tests/functional/tree/aligned.fasta.xz000066400000000000000000000071041456376326500222750ustar00rootroot000000000000007zXZִF!t/]0ރk{5 Nz@䮔ӹsbFg#] e{ܛ" 8(.~&pVj/l'CRu6oqm5]LF 腏~q2 LBʔ 5^[4Xդ [<:"i Gݶdԑ_mL3o@kƻ-}ڪM SPҐo2?u+҉:՞ Y7*&U\LOqu1Ec:6ג7XxaɿwYYH@ o$޻^4ChW݂wq+;ʱ~~ jUtxbtPau2û 撅L{|윶t0mgH܋ ݪM)1!$ Sv!Oa)J2{߀J,t-‚X#_m2X6]k˳e =۰sy֭+`IQ(ߨoDDkug{?ypr&|~fsM=+T2o&5gBd N]i $x엎V Ld(!&uWˍq o`5{2ܳsF.[Q8]ͺӊm`@!連GK&wd}qyUX`F\`ФXS ڰ#<|YT }'E'\p\k;O[h7W&\;o޺sBy3AY\R݊Oays%}Ui?}2G/^D鐞>[2O aS7 {DqmW5g8 qRz3Txes'p0zU󥯍0A$G2І@ @Ld&CH9/v7wZ;8Zm)S_>|jYX[E19pf<7 W+[CN >rO ȿ*4nQB+XոUS5 죲 K7D5$Ej9hj4!N%P =ACu +'Ҵuc)Gz}0sK(iA}uӑ!]L.-1+o/{u|y Le(lz,eׄ4+R = .,+"`+^b( 5Z9fZ+,f@u"5Y K33uu%_u0f}}񊥫a{K~XfKDš ,aŪƊW?l/[Ѩ'>*?; @{A2aǎCVP|+lP:sb2?.9'(m-ǷRiXGd+WJt /gܻO>㟠Io7ه/@ه,!ArpSSb?;4i.hL)%~$xGq䳱s9]Lj+ӫcs%W`ot֗$i+_w\X7Y*;Ish_mԓjVU)ւq#}q :b<, _1Dž4IzAQcGהmgp H}s )[ !hŪ+> mj ,==t@uB]fUė};0iz#ؒ]Ŏ}X49q' ]/$a(:[ @#'Wv>f׋ ۓWe5rmهD."d56>]eT;HרPv]aVʆ 6)LS T ?I)$")"l!t",FS\ ,"^ܕxE1ʅ,bTON5#MjxЊ^$˴u3${;,ٶc\.43o=,>)kŵz@(6|։Uv-`Ӳ )#Nt{5x Ubڗ1۴=/]qثth35?KKk-Ov\+w<ީP~oP٢0Lo1͚zZbIu3@X/S{_pӏ?Z HA]ސ/t^A ?òɯջ*#!KJ_{ Ous34^4=ȹԹwvK)xAe|*scoS7O~f h†vo i:EّtK\=nm!o)'j&\Ċ|6̱gYZaugur-24.2.2/tests/functional/tree/excluded_sites.txt000066400000000000000000000000121456376326500227460ustar00rootroot000000000000001000 2000 augur-24.2.2/tests/functional/tree/full_aligned.fasta000066400000000000000000013301641456376326500226650ustar00rootroot00000000000000>KX369547.1 Zika virus strain PF13/251013-18, complete genome GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGAAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCCTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCGAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >1_0087_PF NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCATTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCGATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAAATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >1_0181_PF NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGAAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTAAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCCTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >1_0199_PF NNNNNNNACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTGCTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGATCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >ZKC2/2016 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTCTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAATGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACTTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGCTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCCAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAGGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACCAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCAGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTTGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGAGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTGATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACC ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCCGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTCTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCACGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCTTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTACGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTAGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTTTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGACGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGATCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAGTATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGCTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAGG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAGGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTTAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >SMGC_1 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTCTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAATGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACTTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGCTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCCAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAGGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACCAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCAGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCANTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTTGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGAGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTGATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACC ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCCGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTCTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCACGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCTTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTACGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTAGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTTTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGACGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGATCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAGTATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGCTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAGG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAGGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTTAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >EcEs062_16 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGCGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGACTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCCATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAGAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAG GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCTGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCTATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAACTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCCGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTGGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACACTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATACAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTTATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACG GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCTCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAATAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACGCCTGGAGTGCTGTAAGCACCAATCCTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >PAN/CDC_259359_V1_V3/2015 NNNNNNNNNNNNNNNNNNNNGAATTTGAAGCGAATGCTAACAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTACAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTGGCTCATCTGGCGCTGATAGCAGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATAGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCTGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCCACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >COL/FLR_00024/2015 NNNTCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAACAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGAGAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGCTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >COL/FLR_00008/2015 NNNTCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGCTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGATCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGAAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACAGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCCGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >VEN/UF_1/2016 GACTCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGATGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTTCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTCGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATTGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAAGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCACCCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATCTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCCTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCGCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGTTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAATATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTGCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >Colombia/2016/ZC204Se NNNNNNNNNNNNGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGAAACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAAAGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCCGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGTTTCGCTTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTTTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG TTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CATAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCTGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAGGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAATAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGCTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGAYTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTGCGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGCGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >Brazil/2015/ZBRC301 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCC AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAGCTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGATAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGANNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACT CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTTTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAAAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTTAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCANGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAGATGTGGCAGCTCCTTTATTTCCAC AGAANGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAANGGAGAATGGATGACCACTGAAGAC ATGCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >Brazil/2015/ZBRA105 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGANNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATAGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAGAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCA GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >Brazil/2015/ZBRC303 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCACAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TANCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTANNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC NAGGCGGCTGNCATCTTNATGACCGCCACGCCACCAGGAANCCGTGACGCATTNNCGGAC TNCAACTCNCCANNNATGGACACCGAAGTGGAAGTCNNNNANANNGCCTGGAGCTCAGGC TTTGATTNGGTGACGGATCATTNTGNNAAAACAGNTTGGNTTGTTNNNNGCGTNNNGAAC GGCNNTGANATCNCAGCNTGTCNGACNAAGGCTNGNAAACNGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTNNNGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCNNAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGANGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTNGGGGAT TGGCTTGNAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATNGGGGAGGACTGGTCAGAGTGCCN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >HND/2016/HU_ME59 NNNNNNNNNNNNNNNNNNNNNNGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATAYGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAWTTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGCTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTA AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTACTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCACTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCCTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTACATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGR TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATACTGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACCCTTGGGGCCAGT GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTGATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTTGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATCCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >Nica1_16 NNNNNNNNNNNNNNNNNNTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAACAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGCTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTA AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTACTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTGGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCACTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTACATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATACTGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAGAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACCCTTGGGGCCAGT GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAGATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCTTAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAACCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTTGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >V8375 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGATAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTGGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCTGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGCTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTA AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTACTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCACTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTACATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATACTGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCTTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACCCTTGGGGCCAGT GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACTGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGCGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAGAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTTGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCAAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >PRVABC59 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAACAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACCAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCTGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAAGTTGAGATAACGCCCAATTCACCGAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACTGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTATTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGACCACTTCTCCCTTGGAGTGCTTGTGATCCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGATGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAACGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCCTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAGGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATAATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTCTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACCTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGCATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GTCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGCACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGC TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGTATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATTAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >USA/2016/FL022 NNNNNNNNNNGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTCCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CAGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTTATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGCTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACCCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTGGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGATACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCGATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTCCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCCCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTAGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTATGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAATCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCATTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTC CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTANNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >BRA/2016/FC_6706 NNNNNNNNNNNNNNNNNNNNNAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTYGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCCGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGYAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGTGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCTTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTWGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCGGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGANNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGAACAGAAATCGTCGACTTAATGTGCYATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCRGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCTAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTCTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAGGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCTCTGATCACAGCC GCAACCTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTA GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAG CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGRKTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGTCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTCAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >DOM/2016/BB_0059 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTCCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTKAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTGGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGATACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGT ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCATGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GARKCAAGAATGCTCCTTGACAATATTTGCCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACRGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAASGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGWTGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCATTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >DOM/2016/BB_0433 NNNNNNNNNNNNNNNNNNNNNNNTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGACGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAAGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAAATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGATTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGCACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACTTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACCACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGCCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTATCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTTTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCCTAATGTTG TCAGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >DOM/2016/BB_0183 NNNNNNNNNNNNNNNNNNNNNNGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTCCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCCTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGGCACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCATGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTTATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCGG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCCCCAGAAGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >DOM/2016/MA_WGS16_011 NNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTATTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACATTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTKGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCGATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCYTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCWTACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCYGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGRGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGYCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTCCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTGAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCCGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGGGATC AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >USA/2016/FLUR022 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTCTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGCTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGTCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTCCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGACTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCACCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGGAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGTGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCTGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCTTGGAGCGGCTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCTACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGCACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAATAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCATTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTCAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGGCGGCCGG >Aedes_aegypti/USA/2016/FL05 NNNNNNNNNNNNGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCAGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGTTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTCTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGCTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTTAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTCCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCCTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGACTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCACCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCTATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCATTCTGGAACAGAAATCGTCGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACCGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACTTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGGAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCTGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGGCTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCTACACAAGGGTCAGCATCCTCTCTAGTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGCACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTAGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAATAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGAAAAGTTAGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCATTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGAGGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >USA/2016/FLWB042 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGATTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAANNNNNNNNNNNNNNNNNNNNCNNNNNNC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTACATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTCCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAAACCTGGTTGGAATCAAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTTATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGCTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTTCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTGGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCCAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGATACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATCCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTCATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGATGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGCGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAT GCAATCCTGGAAGAGAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTTAGNNNNNNNNNGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAATACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGANNNNNNNNNNNN NNCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAGTGGTGANNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTANCTTTCATCTTCAGAGCTAATTNNNNNCCCCGTGAAAGC ATGCTGCNNNCCNNNNCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTGTTGNTCACAAGGANTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCGCTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAGGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCAGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGATCATTCTGGAAAAACANTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGNNCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGNNNNNNNNN NNNAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACNTACACAGATAGAAGATGGTGCTTTGATGGCACNACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGANNNNNNNNGAAAANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAANNNNNNNNNNNN NNNNNNNNNNNNNNNCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTNTTNNTNNNNNNNNNCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTAGGCTTGATCACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGAGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNTGTGGATGGAATAGTNGTNACTGACATTGACACAATGANA ATTGACCCCCAAGTGGAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGNAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNCCCACACAAGGGTCAGCNTCCTCTCTANTAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTTTGNNGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGT TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGATACCCGCATCAGCAGGTTTGATCTNGAGAAT GAAGCTCTAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAAAACA GTTATGGACATTATTTCGAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTTAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTNGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGNCAGNNNNNGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGNNNNNNNNNNNNNNNNNNNNNNNNNGG AAGGACACACAAGAGTGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCACTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAAATGTGGCAGCTCCTTTATTTCCAN NNNNGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCATTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTGTGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGGATCATAGGTGANGAAGAAAAGTACATGGACTACCTATCCACCCAAGTC CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTCAATGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCTATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GNNNNNNAAAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >SG_027 NNNNNNNNCTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAGCGATGCTGGGGAGGCCATATCTTTTCCAACCACA CTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTAGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAGCTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAGACCTGGTTGGAGTCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTCTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGATACCCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGAAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTCCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTNTTGGANGCCTAGGANTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATANCAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGACAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCCTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGTACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGCCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAAACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAAAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGACTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCTGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGCACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAC CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAACACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCG TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATTTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTCTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTCATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTAGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCACTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTTAAAGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GACTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTCTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACTAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGGACAGAAATCGTTGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACNATANTCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCGGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGACCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACGAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGATGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATCTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGATACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTCTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCGGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGACCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGCGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCCTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCA GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGTTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGCTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCAACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGNAGGC ACTNGTCAGGTTATGAGCATGGTNNCTTCCTGGTTGTGGAAAGNGNTAGGCAAACACNNA NGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGC TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTGATGGACATTATTTCAAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTCAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGG AAGGACACACAAGAATGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCATTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAGATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTATGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGAATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCCATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GNNNNNNNNNNNNNNNNNNNNNNNNNNNN >SG_074 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAGCGATGCTGGGGAGGCCATATCTTTTCCAACCACA CTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTAGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAGCTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAGACCTGGTTGGAGTCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGATACCCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGAAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTCCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGACAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCCTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGTACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGCCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAAACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAAAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGACTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCTGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGCACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAC CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAACACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCG TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATTTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTCTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTCATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTAGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCACTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTTAAAGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GACTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTCTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACTAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGGACAGAAATCGTTGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCGGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGACCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACGAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGATGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATCTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGATACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTCTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCGGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGACCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGCGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCCTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGTTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCAACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGC TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTGATGGACATTATTTCAAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTCAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGG AAGGACACACAAGAATGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCATTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAGATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTATGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGAATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCCATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATCGCCGAATAGCGNNNNNNNN >SG_056 GAATCAGACTGCGACAGTTCGAGTTTGAAGCGAAAGCTAGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAGCGATGCTGGGGAGGCCATATCTTTTCCAACCACA CTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTAGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAGACCTGGTTGGAGTCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGATACCCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGAAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTCCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGACAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCCTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGTACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGCCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAAACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAAAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGACTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCTGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGCACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAC CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAACACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCG TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATTTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTCTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTCATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTAGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCACTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTTAAAGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GACTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTCTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACTAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGGACAGAAATCGTTGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCGGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGACCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACGAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGATGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATCTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGATACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTCTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCGGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGACCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGCGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCCTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGTTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAATATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCAACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCCGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGC TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTGATGGACATTATTTCAAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTCAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGG AAGGACACACAAGAATGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCATTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAGATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTATGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGAATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCCATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >SG_018 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGNNNNNNNNNNNNNNNNNNNCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGTCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAGCGATGCTGGGGAGGCCATATCTTTTCCAACCACA CTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTAGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAGCTTGGGTTGTGTACGTAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGG TCGCAGACCTGGTTGGAGTCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCTGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGATACCCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGAAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTCCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGACAAACTTAGATTG AAGGGCGTGTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCCTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGTACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGCCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAAACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAAAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGACTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCTGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGCACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAC CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACATTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAACACC AGAGAGGGCTACAGGACCCAAATGAAAGGGCCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCG TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATTTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTCTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTCATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTAGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCACTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAAGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCACTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GACTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTCTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACTAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGGACAGAAATCGTTGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATACATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCGGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGACCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACGAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGATGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATCTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGATACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGACCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGCGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCCTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGTTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGGGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCAACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGC TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTGATGGACATTATTTCAAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTCAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGG AAGGACACACAAGAATGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCATTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAGATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTATGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGAATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAGGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCCATAGTCAGGCCGAGAACGCCATGGCACGGAAGAAGCCATG CTGCCTGTGAGCCCCTCAGAGGACACTGAGTCAAAAAACCCCACGCGCTTGGAGGCGCAG GATGGGAAAAGAAGGTGGCGACCTTCCCCACCCTTCAATCTGGGGCCTGAACTGGAGATC AGCTGTGGATCTCCAGAAGAGGGACTAGTGGTTAGAGGAGACCCCCCGGAAAACGCAAAA CAGCATATTGACGCTGGGAAAGACCAGAGACTCCATGAGTTTCCACCACGCTGGCCGCCA GGCACAGATNNNNNNNNNNNNNNNNNNNN >Thailand/1610acTw NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAACAGTATCAACAGGTTTT ATTTGGATTTGGAAACGAGAGTTTCTGGTCATGAAAAACCCAAAAAAGAAATCCGGAGGA TTCCGGATTGTCAATATGCTAAAACGCGGAGTAGCCCGTGTGAGCCCCTTTGGGGGCTTG AAGAGGCTGCCAGCCGGACTTCTGCTGGGCCATGGGCCCATCAGGATGGTCTTGGCGATT CTAGCCTTTTTGAGGTTCACGGCAATCAAGCCATCACTGGGTCTCATCAATAGATGGGGT TCAGTGGGGAAAAAAGAGGCTATGGAAATAATAAAGAAGTTCAAGAAAGATCTGGCTGCC ATGCTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGTGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAGCGATGCTGGGGAGGCCATATCTTTTCCAACCACA CTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTAGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCTACTAGGAAGCTGCAAACGCGG TCGCAGACCTGGTTGGAGTCAAGAGAATACACAAAGCACTTGATTAGAGTCGAAAATTGG ATATTCAGGAACCCTGGCTTCGCGTTAGCAGCAGCCGCCATCGCTTGGCTTTTGGGAAGC TCAACGAGCCAAAAAGTCATATACTTGGTCATGATACTGCTGATTGCCCCGGCATACAGC ATCAGGTGCATAGGAGTCAGCAATAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACACGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCGGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACCCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGAAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATAATG CTGTCAGTCCATGGCTCCCAGCACAGTGGGATGATCGTTAATGACACAGGACATGAAACT GATGAGAATAGAGCGAAGGTTGAGATAACGCCCAATTCACCAAGAGCCGAAGCCACCCTG GGGGGTTTTGGAAGCCTAGGACTTGATTGTGAACCGAGGACAGGCCTTGACTTTTCAGAT TTGTATTACTTGACTATGAATAACAAGCACTGGTTGGTTCACAAGGAGTGGTTCCACGAC ATTCCATTACCTTGGCACGCTGGGGCAGACACCGGAACTCCACACTGGAACAACAAAGAA GCACTGGTAGAGTTCAAGGACGCACATGCCAAAAGGCAAACTGTCGTGGTTCTAGGGAGT CAAGAAGGAGCAGTTCACACGGCCCTTGCTGGAGCTCTGGAGGCTGAGATGGATGGTGCA AAGGGAAGGCTGTCCTCTGGCCACTTGAAATGTCGCCTGAAAATGGATAAACTTAGATTG AAGGGCGTCTCATACTCCTTGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCCTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAAGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGTACCATTGGAAAAGCATTTGAAGCCACTGTGAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAATTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGCCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCTTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAAACGAGATGCGGT ACAGGGGTATTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCGTAGATTGGCAGCAGCAGTCAAGCAAGCCTGGGAAGATGGTATCTGTGGG ATCTCCTCTGTTTCAAGAATGGAAAACATCATGTGGAGATCAGTAGAAGGGGAGCTCAAC GCAATCCTGGAAGAAAATGGAGTTCAACTGACGGTCGTTGTGGGATCTGTAAAAAACCCC ATGTGGAGAGGTCCACAGAGACTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCTGCCGTTATTGGAACAGCTGTTAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAGGAATGACACATGGAGGCTGAAGAGGGCCCAC CTGATCGAGATGAAAACATGTGAATGGCCAAAGTCCCACACGTTGTGGACAGATGGAATA GAAGAGAGTGATCTGATCATACCCAAGTCTTTAGCTGGGCCACTCAGCCATCACAACACC AGAGAGGGCTACAGGACCCAAATGAAAGGACCATGGCACAGTGAAGAGCTTGAAATTCGG TTTGAGGAATGCCCAGGCACTAAGGTCCACGTGGAGGAAACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGTAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTGGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTGGCTCATTTGGCGCTGGTAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATTTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTTTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGACAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTCATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTTGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGAGCAGGTGAC ATCACATGGGAAAAAGATGCGGAAGTCACTGGAAACAGTCCCCGGCTCGATGTGGCACTA GATGAGAGTGGTGATTTCTCCCTGGTGGAGGATGACGGTCCCCCCATGAGAGAGATCATA CTCAAAGTGGTCCTGATGACCATCTGTGGCATGAACCCAATAGCCATACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTCATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCGCTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GACTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTCTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACTAGGGTTGTC GCTGCTGAAATGGAGGAAGCCCTTAGAGGGCTTCCAGTGCGTTATATGACAACAGCAGTC AATGTCACCCACTCTGGGACAGAAATCGTTGACTTAATGTGCCATGCCACCTTCACTTCA CGTCTACTACAGCCAATCAGAGTCCCCAACTATAATCTGTATATTATGGATGAGGCCCAC TTCACAGATCCCTCAAGTATAGCAGCAAGAGGATATATTTCAACAAGGGTTGAGATGGGC GAGGCGGCTGCCATCTTCATGACCGCCACGCCACCAGGAACCCGTGACGCATTTCCGGAC TCCAACTCACCAATTATGGACACCGAAGTGGAAGTCCCGGAGAGAGCCTGGAGCTCAGGC TTTGATTGGGTGACGGACCATTCTGGAAAAACAGTTTGGTTTGTTCCAAGCGTGAGGAAC GGCAATGAGATCGCAGCTTGTCTGACAAAGGCTGGAAAACGGGTCATACAGCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCGGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGATGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCGGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTTGCATCTGCCGGAATAACCTATACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGATACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCGGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGACCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTGCTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGCGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATCGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCCTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTCGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGACCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCA GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACTGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCT GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCTACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGTTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCTTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCATGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTTAAGAGTGGGGTG GACGTCTTTCACATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGAAAAAAGACCAGGAGCCTTTTGCATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCAACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGCCCAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAAAAAGGTTCGTAGCAATGCAGCATTA GGGGCAATATTTGAAGAGGAAAAAGAGTGGAAGACTGCAGTGGAAGCTGTGAACGATCCA AGGTTCTGGGCTCTAGTGGACAAGGAAAGAGAGCACCACCTGAGAGGAGAGTGCCAGAGC TGTGTGTACAACATGATGGGAAAAAGAGAAAAGAAACAAGGGGAATTTGGAAAGGCCAAG GGCAGCCGCGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCCACCAAATGGAAAAAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAGACA GTGATGGACATTATTTCAAGACAAGACCAAAGGGGGAGCGGACAAGTTGTCACTTACGCT CTCAACACATTTACCAACCTAGTGGTGCAACTCATTCGGAATATGGAGGCTGAGGAAGTT CTAGAGATGCAAGACTTGTGGCTGCTGCGGAGGTCAGAGAAAGTGACCAACTGGTTGCAG AGCAACGGATGGGATAGGCTCAAACGAATGGCAGTCAGTGGAGATGATTGCGTTGTGAAG CCAATTGATGATAGGTTTGCACATGCCCTCAGGTTCTTGAATGATATGGGGAAAGTTAGG AAGGACACACAAGAATGGAAACCCTCAACTGGATGGGACAACTGGGAAGAAGTTCCGTTT TGCTCCCACCATTTCAACAAGCTCCATCTCAAGGACGGGAGGTCCATTGTGGTTCCCTGC CGCCACCAAGATGAACTGATTGGCCGGGCCCGCGTCTCTCCAGGGGCGGGATGGAGCATC CGGGAGACTGCTTGCCTAGCAAAATCATATGCGCAGATGTGGCAGCTCCTTTATTTCCAC AGAAGGGACCTCCGACTGATGGCCAATGCCATTTGTTCATCTGTGCCAGTTGACTGGGTT CCAACTGGGAGAACTACCTGGTCAATCCATGGAAAGGGAGAATGGATGACCACTGAAGAC ATGCTTGTGGTGTGGAACAGAGTGTGGATTGAGGAGAACGACCACATGGAAGACAAGACC CCAGTTACGAAATGGACAGACATTCCCTATTTGGGAAAAAGGGAAGACTTATGGTGTGGA TCTCTCATAGGGCACAGACCGCGCACCACCTGGGCTGAGAACATTAAAAACACAGTCAAC ATGGTGCGCAGAATCATAGGTGATGAAGAAAAGTACATGGACTACCTATCCACCCAAGTT CGCTACTTGGGTGAAGAAGGGTCTACACCTGGAGTGCTGTAAGCACCAATCTTAGTGTTG TCAGGCCTGCTAGTCAGCCACAGCTTGGGGAAAGCTGTGCAGCCTGTGACCCCCCCAGGA GAAGCTGGGAAACCAAGCCCATAGTCAGGCCGAGAACGCCATGGCACGGAAGNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN >Brazil/2016/ZBRC16 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTGAGAATAATCAATGCTAGGAAGGAGAAGAAGAGACGAGGCGCAGATACTAGTGTC GGAATTGTTGGCCTCCTGCTGACCACAGCTATGGCAGCGGAGGTCACTAGACGTGGGAGT GCATACTATATGTACTTGGACAGAAACGATGCTGGGGAGGCCATATCTTTTCCAACCACA TTGGGGATGAATAAGTGTTATATACAGATCATGGATCTTGGACACATGTGTGATGCCACC ATGAGCTATGAATGCCCTATGCTGGATGAGGGGGTGGAACCAGATGACGTCGATTGTTGG TGCAACACGACGTCAACTTGGGTTGTGTACGGAACCTGCCATCACAAAAAAGGTGAAGCA CGGAGATCTAGAAGAGCTGTGACGCTCCCCTCCCATTCCACTAGGAAGCTGCAAACGCGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTAGGGACTTTGTGGAAGGTATGTCAGGTGGGACTTGG GTTGATGTTGTCTTGGAACATGGAGGTTGTGTCACCGTAATGGCACAGGACAAACCGACT GTCGACATAGAGCTGGTTACAACAACAGTCAGCAACATGGCGGAGGTAAGATCCTACTGC TATGAGGCATCAATATCAGACATGGCTTCGGACAGCCGCTGCCCAACACAAGGTGAAGCC TACCTTGACAAGCAATCAGACACTCAATATGTCTGCAAAAGAACGTTAGTGGACAGAGGC TGGGGAAATGGATGTGGACTTTTTGGCAAAGGGAGCCTGGTGACATGCGCTAAGTTTGCA TGCTCCAAGAAAATGACCGGGAAGAGCATCCAGCCAGAGAATCTGGAGTACCGGATNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNGTGTACCGCAGCGTTCACATTCACCAAGATCCCGGCTGAA ACACTGCACGGGACAGTCACAGTGGAGGTACAGTACGCAGGGACAGATGGACCTTGCAAG GTTCCAGCTCAGATGGCGGTGGACATGCAAACTCTGACCCCAGTTGGGAGGTTGATAACC GCTAACCCCGTAATCACTGAAGGCACTGAGAACTCTAAGATGATGCTGGAACTTGATCCA CCATTTGGGGACTCTTACATTGTCATAGGAGTCGGGGAGAAGAAGATCACCCACCACTGG CACAGGAGTGGCAGCACCATTGGAAAAGCATTTGAAGCCACTGTAAGAGGTGCCAAGAGA ATGGCAGTCTTGGGAGACACAGCCTGGGACTTTGGATCAGTTGGAGGCGCTCTCAACTCA TTGGGCAAGGGCATCCATCAAGTTTTTGGAGCAGCTTTCAAATCATTGTTTGGAGGAATG TCCTGGTTCTCACAAATTCTCATTGGAACGTTGCTGATGTGGTTGGGTCTGAACACAAAG AATGGATCTATTTCCCTTATGTGCTTGGCCTTAGGGGGAGTGTTGATCTTCCTATCCACA GCCGTCTCTGCTGATGTGGGGTGCTCGGTGGACTTCTCAAAGAAGGAGACGAGATGCGGT ACAGGGGTGTTCGTCTATAACGACGTTGAAGCCTGGAGGGACAGGTACAAGTACCATCCT GACTCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCCC ATGTGGAGAGGTCCACAGAGATTGCCCGTGCCTGTGAACGAGCTGCCCCACGGCTGGAAG GCTTGGGGGAAATCGTACTTCGTCAGAGCAGCAAAGACAAATAACAGCTTTGTCGTGGAT GGTGACACACTGAAGGAATGCCCACTCAAACATAGAGCATGGAACAGCTTTCTTGTGGAG GATCATGGGTTCGGGGTATTTCACACTAGTGTCTGGCTCAAGGTTAGAGAAGATTATTCA TTAGAGTGTGATCCAGCCGTTATTGGAACAGCTGTCAAGGGAAAGGAGGCTGTACACAGT GATCTAGGCTACTGGATTGAGAGTGAGAAGAATGACACATGGAGGCTGAAGAGGGCCCAT CTGATCGAGATGAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATGTGGAACAAGAGGACCA TCTCTGAGATCAACCACTGCAAGCGGAAGGGTGATCGAGGAATGGTGCTGCAGGGAGTGC ACAATGCCCCCACTGTCGTTCCGGGCTAAAGATGGCTGTTGGTATGGAATGGAGATAAGG CCCAGGAAAGAACCAGAAAGCAACTTAGTAAGGTCAATGGTGACTGCAGGATCAACTGAT CACATGGATCACTTCTCCCTTGGAGTGCTTGTGATTCTGCTCATGGTGCAGGAAGGGCTG AAGAAGAGAATGACCACAAAGATCATCATAAGCACATCAATGGCAGTGCTGGTAGCTATG ATCCTGGGAGGATTTTCAATGAGTGACCTAGCTAAGCTTGCAATTTTGATGGGTGCCACC TTCGCGGAAATGAACACTGGAGGAGATGTAGCTCATCTGGCGCTGATAGCGGCATTCAAA GTCAGACCAGCGTTGCTGGTATCTTTCATCTTCAGAGCTAATTGGACACCCCGTGAAAGC ATGCTGCTGGCCTTGGCCTCGTGTCTTTTGCAAACTGCGATCTCCGCCTTGGAAGGCGAC CTGATGGTTCTCATCAATGGTTTTGCTCTGGCCTGGTTGGCAATACGAGCGATGGTTGTT CCACGCACTGATAACATCACCTTGGCAATCCTGGCTGCTCTGACACCACTGGCCCGGGGC ACACTGCTTGTGGCGTGGAGAGCAGGCCTTGCTACTTGCGGGGGGTTTATGCTCCTCTCT CTGAAGGGAAAAGGCAGTGTGAAGAAGAACTTACCATTTGTCATGGCCCTGGGACTAACC GCTGTGAGGCTGGTCGACCCCATCAACGTGGTGGGACTGCTGTTGCTCACAAGGAGTGGG AAGCGGAGCTGGCCCCCTAGCGAAGTACTCACAGCTGTTGGCCTGATATGCGCATTGGCT GGAGGGTTCGCCAAGGCAGATATAGAGATGGCTGGGCCCATGGCCGCGGTCGGTCTGCTA ATTGTCAGTTACGTGGTCTCAGGAAAGAGTGTGGACATGTACATTGAAAGANNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCTTTGCAGCT GGAGCGTGGTACGTATACGTGAAGACTGGAAAAAGGAGTGGTGCTCTATGGGATGTGCCT GCTCCCAAGGAAGTAAAAAAGGGGGAGACCACAGATGGAGTGTACAGAGTAATGACTCGT AGACTGCTAGGTTCAACACAAGTTGGAGTGGGAGTTATGCAAGAGGGGGTCTTTCACACT ATGTGGCACGTCACAAAAGGATCCGCACTGAGAAGCGGTGAAGGGAGACTTGATCCATAC TGGGGAGATGTCAAGCAGGATCTGGTGTCATACTGTGGTCCATGGAAGCTAGATGCCGCC TGGGACGGGCACAGCGAGGTGCAGCTCTTGGCCGTGCCCCCCGGAGAGAGAGCGAGGAAC ATCCAGACTCTGCCCGGAATATTTAAGACAAAGGATGGGGACATTGGAGCGGTTGCGCTG GATTACCCAGCAGGAACTTCAGGATCTCCAATCCTAGACAAGTGTGGGAGAGTGATAGGA CTTTATGGCAATGGGGTCGTGATCAAAAATGGGAGTTATGTTAGTGCCATCACCCAAGGG AGGAGGGAGGAAGAGACTCCTGTTGAGTGCTTCGAGCCTTCGATGCTGAAGAAGAAGCAG CTAACTGTCTTAGACTTGCATCCTGGAGCTGGGAAAACCAGGAGAGTTCTTCCTGAAATA GTCCGTGAAGCCATAAAAACAAGACTCCGTACTGTGATCTTAGCTCCAACCAGGGTTGTC GCTGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAGCAGA AAGACTTTTGAGACAGAGTTCCAGAAAACAAAACATCAAGAGTGGGACTTTGTCGTGACA ACTGACATTTCAGAGATGGGCGCCAACTTTAAAGCTGACCGTGTCATAGATTCCAGGAGA TGCCTAAAGCCGGTCATACTTGATGGCGAGAGAGTCATTCTGGCTGGACCCATGCCTGTC ACACATGCCAGCGCTGCCCAGAGGAGGGGGCGCATAGGCAGGAATCCCAACAAACCTGGA GATGAGTATCTGTATGGAGGTGGGTGCGCAGAGACTGACGAAGACCATGCACACTGGCTT GAAGCAAGAATGCTCCTTGACAATATTTACCTCCAAGATGGCCTCATAGCCTCGCTCTAT CGACCTGAGGCCGACAAAGTAGCAGCCATTGAGGGAGAGTTCAAGCTTAGGACGGAGCAA AGGAAGACCTTTGTGGAACTCATGAAAAGAGGAGATCTTCCTGTTTGGCTGGCCTATCAG GTCGCATCTGCCGGAATAACCTACACAGATAGAAGATGGTGCTTTGATGGCACGACCAAC AACACCATAATGGAAGACAGTGTGCCGGCAGAGGTGTGGACCAGACACGGAGAGAAAAGA GTGCTCAAACCGAGGTGGATGGACGCCAGAGTTTGTTCAGATCATGCGGCCCTGAAGTCA TTCAAGGAGTTTGCCGCTGGGAAAAGAGGAGCGGCTTTTGGAGTGATGGAAGCCCTGGGA ACACTGCCAGGACACATGACAGAGAGATTCCAGGAAGCCATTGACAACCTCGCTGTGCTC ATGCGGGCAGAGACTGGAAGCAGGCCTTACAAAGCCGCGGCGGCCCAATTGCCGGAGACC CTAGAGACCATTATGCTTTTGGGGTTACTGGGAACAGTCTCGCTGGGAATCTTTTTCGTC TTGATGAGGAACAAGGGCATAGGGAAGATGGGCTTTGGAATGGTGACTCTTGGGGCCAGC GCATGGCTCATGTGGCTCTCGGAAATTGAGCCAGCCAGAATTGCATGTGTCCTCATTGTT GTGTTCCTATTGCTGGTGGTGCTCATACCTGAGCCAGAAAAGCAAAGATCTCCCCAGGAC AACCAAATGGCAATCATCATCATGGTAGCAGTAGGTCTTCTGGGCTTGATTACCGCCAAT GAACTCGGATGGTTGGAGAGAACAAAGAGTGACCTAAGCCATCTAATGGGAAGGAGAGAG GAGGGGGCAACCATAGGATTCTCAATGGACATTGACCTGCGGCCAGCCTCAGCTTGGGCC ATCTATGCTGCCTTGACAACTTTCATTACCCCAGCCGTCCAACATGCAGTGACCACTTCA TACAACAACTACTCCTTAATGGCGATGGCCACGCAAGCTGGAGTGTTGTTTGGTATGGGC AAAGGGATGCCATTCTACGCATGGGACTTTGGAGTCCCGCTGCTAATGATAGGTTGCTAC TCACAATTAACACCCCTGACCCTAATAGTGGCCATCATTTTGCTCGTGGCGCACTACATG TACTTGATCCCAGGGCTGCAGGCAGCAGCTGCGCGTGCTGCCCAGAAGAGAACGGCAGCT GGCATCATGAAGAACCCTGTTGTGGATGGAATAGTGGTGACTGACATTGACACAATGACA ATTGACCCCCAAGTGGAGAAAAAGATGGGACAGGTGCTACTCATAGCAGTAGCCGTCTCC AGCGCCATACTGTCGCGGACCGCCTGGGGGTGGGGGGAGGCTGGGGCCCTGATCACAGCC GCAACTTCCACTTTGTGGGAAGGCTCTCCGAACAAGTACTGGAACTCCTCCACAGCCACT TCACTGTGTAACATTTTTAGGGGAAGTTACTTGGCTGGAGCTTCTCTAATCTACACAGTA ACAAGAAACGCTGGCTTGGTCAAGAGACGTGGGGGTGGAACAGGAGAGACCCTGGGAGAG AAATGGAAGGCCCGCTTGAACCAGATGTCGGCCCTGGAGTTCTACTCCTACAAAAAGTCA GGCATCACCGAGGTGTGCAGAGAAGAGGCCCGCCGCGCCCTCAAGGACGGTGTGGCAACG GGAGGCCATGCTGTGTCCCGAGGAAGTGCAAAGCTGAGATGGTTGGTGGAGCGGGGATAC CTGCAGCCCTATGGAAAGGTCATTGATCTTGGATGTGGCAGAGGGGGCTGGAGTTACTAC GCCGCCACCATCCGCAAAGTTCAAGAAGTGAAAGGATACACAAAAGGAGGCCCTGGTCAT GAAGAACCCGTGTTGGTGCAAAGCTATGGGTGGAACATAGTCCGTCTCAAGAGTGGGGTG GACGTCTTTCATATGGCGGCTGAGCCGTGTGACACGTTGCTGTGTGACATAGGTGAGTCA TCATCTAGTCCTGAAGTGGAAGAAGCACGGACGCTCAGAGTCCTCTCCATGGTGGGGGAT TGGCTTGNAAAAAGACCAGGAGCCTTTTGTATAAAAGTGTTGTGCCCATACACCAGCACT ATGATGGAAACCCTGGAGCGACTGCAGCGTAGGTATGGGGGAGGACTGGTCAGAGTGCCA CTCTCCCGCAACTCTACACATGAGATGTACTGGGTCTCTGGAGCGAAAAGCAACACCATA AAAAGTGTGTCCACCACGAGCCAGCTCCTCTTGGGGCGCATGGACGGGTCTAGGAGGCCA GTGAAATATGAGGAGGATGTGAATCTCGGCTCTGGCACGCGGGCTGTGGTAAGCTGCGCT GAAGCTCCCAACATGAAGATCATTGGTAACCGCATTGAAAGGATCCGCAGTGAGCACGCG GAAACGTGGTTCTTTGACGAGAACCACCCATATAGGACATGGGCTTACCATGGAAGCTAT GAGGCCCCCACACAAGGGTCAGCGTCCTCTCTAATAAACGGGGTTGTCAGGCTCCTGTCA AAACCCTGGGATGTGGTGACTGGAGTCACAGGAATAGCCATGACCGACACCACACCGTAT GGTCAGCAAAGAGTTTTCAAGGAAAAAGTGGACACTAGGGTGCCAGACCCCCAAGAAGGC ACTCGTCAGGTTATGAGCATGGTCTCTTCCTGGTTGTGGAAAGAGCTAGGCAAACACAAA CGGCCACGAGTCTGTACCAAAGAAGAGTTCATCAACNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAG GGCAGCCGTGCCATCTGGTATATGTGGCTAGGGGCTAGATTTCTAGAGTTCGAAGCCCTT GGATTCTTGAACGAGGATCACTGGATGGGGAGAGAGAACTCAGGAGGTGGTGTTGAAGGG CTGGGATTACAAAGACTCGGATATGTCCTAGAAGAGATGAGTCGCATACCAGGAGGAAGG ATGTATGCAGATGACACTGCTGGCTGGGACACCCGCATCAGCAGGTTTGATCTGGAGAAT GAAGCTCTAATCACCAACCAAATGGAGAGAGGGCACAGGGCCTTGGCATTGGCCATAATC AAGTACACATACCAAAACAAAGTGGTAAAGGTCCTTAGACCAGCTGAAAAAGGGAAAACA GTTATGGACATCATTTCGAGACAAGACCAAAGGGGGNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNN augur-24.2.2/tests/io/000077500000000000000000000000001456376326500145165ustar00rootroot00000000000000augur-24.2.2/tests/io/test_file.py000066400000000000000000000111521456376326500170460ustar00rootroot00000000000000import pytest import augur.io.file class TestFile: def test_open_file_read_text(self, tmpdir): """Read a text file.""" path = str(tmpdir / 'test.txt') with open(path, 'w') as f_write: f_write.write('foo\nbar\n') with augur.io.file.open_file(path) as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_write_text(self, tmpdir): """Write a text file.""" path = str(tmpdir / 'test.txt') with augur.io.file.open_file(path, 'w') as f_write: f_write.write('foo\nbar\n') with open(path) as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_read_gzip(self, tmpdir): """Read a text file compressed with gzip.""" import gzip path = str(tmpdir / 'test.txt.gz') with gzip.open(path, 'wt') as f_write: f_write.write('foo\nbar\n') with augur.io.file.open_file(path) as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_write_gzip(self, tmpdir): """Write a text file compressed with gzip.""" import gzip path = str(tmpdir / 'test.txt.gz') with augur.io.file.open_file(path, 'w') as f_write: f_write.write('foo\nbar\n') with gzip.open(path, 'rt') as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_read_lzma(self, tmpdir): """Read a text file compressed with LZMA.""" import lzma path = str(tmpdir / 'test.txt.xz') with lzma.open(path, 'wt') as f_write: f_write.write('foo\nbar\n') with augur.io.file.open_file(path) as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_write_lzma(self, tmpdir): """Write a text file compressed with LZMA.""" import lzma path = str(tmpdir / 'test.txt.xz') with augur.io.file.open_file(path, 'w') as f_write: f_write.write('foo\nbar\n') with lzma.open(path, 'rt') as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_read_zstd(self, tmpdir): """Read a text file compressed with zstd.""" import zstandard as zstd path = str(tmpdir / 'test.txt.zst') with zstd.open(path, 'wt') as f_write: f_write.write('foo\nbar\n') with augur.io.file.open_file(path) as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_write_zstd(self, tmpdir): """Write a text file compressed with zstd.""" import zstandard as zstd path = str(tmpdir / 'test.txt.zst') with augur.io.file.open_file(path, 'w') as f_write: f_write.write('foo\nbar\n') with zstd.open(path, 'rt') as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_nested_read(self, tmpdir): """Open a text file as a path then buffer for reading.""" path = str(tmpdir / 'test.txt') with open(path, 'wt') as f_write: f_write.write('foo\nbar\n') with augur.io.file.open_file(path) as f_read: with augur.io.file.open_file(f_read) as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_nested_read_zstd(self, tmpdir): """Open a zstd-compressed text file as a path then buffer for reading.""" import zstandard as zstd path = str(tmpdir / 'test.txt.zst') with zstd.open(path, 'wt') as f_write: f_write.write('foo\nbar\n') with augur.io.file.open_file(path) as f_read: with augur.io.file.open_file(f_read) as f_read: assert f_read.read() == 'foo\nbar\n' def test_open_file_nested_write(self, tmpdir): """Open a text file as a path then buffer for writing.""" path = str(tmpdir / 'test.txt') with augur.io.file.open_file(path, 'w') as f_write: with augur.io.file.open_file(f_write, 'w') as f_write: f_write.write('foo\nbar\n') def test_open_file_nested_write_zstd(self, tmpdir): """Open a zstd-compressed text file as a path then buffer for writing.""" path = str(tmpdir / 'test.txt.zst') with augur.io.file.open_file(path, 'w') as f_write: with augur.io.file.open_file(f_write, 'w') as f_write: f_write.write('foo\nbar\n') def test_open_file_read_error(self): """Try reading from an unsupported type.""" path_or_buffer = len("bogus") with pytest.raises(TypeError, match="Type is not supported."): with augur.io.file.open_file(path_or_buffer, 'r') as f: f.read() augur-24.2.2/tests/io/test_metadata.py000066400000000000000000000662751456376326500177270ustar00rootroot00000000000000import pytest import shutil import sys from io import StringIO from augur.errors import AugurError from augur.io.metadata import InvalidDelimiter, read_table_to_dict, read_metadata_with_sequences, write_records_to_tsv, Metadata from augur.types import DataErrorMethod @pytest.fixture def expected_record(): return { 'strain': 'SEQ_A', 'date': '2020-10-03', 'country': 'USA' } @pytest.fixture def metadata_with_duplicate(tmpdir): path = str(tmpdir / 'metadata.tsv') with open(path, 'w') as fh: fh.write('strain\tdate\tcountry\n') fh.write('SEQ_A\t2020-10-03\tUSA\n') fh.write('SEQ_A\t2020-10-03\tUSA\n') fh.write('SEQ_B\t2020-10-03\tUSA\n') fh.write('SEQ_B\t2020-10-03\tUSA\n') return path @pytest.fixture def mp_context(monkeypatch): with monkeypatch.context() as mp: yield mp class TestReadMetadataToDict: def test_read_table_to_dict_with_csv(self, tmpdir, expected_record): path = str(tmpdir / 'metadata.csv') with open(path, 'w') as fh: fh.write('strain,date,country\n') fh.write('SEQ_A,2020-10-03,USA\n') record = next(read_table_to_dict(path, (','))) assert record == expected_record def test_read_table_to_dict_with_csv_from_stdin(self, mp_context, expected_record): stdin = StringIO('strain,date,country\nSEQ_A,2020-10-03,USA\n') mp_context.setattr('sys.stdin', stdin) record = next(read_table_to_dict(sys.stdin, (','))) assert record == expected_record def test_read_table_to_dict_with_tsv(self, tmpdir, expected_record): path = str(tmpdir / 'metadata.tsv') with open(path, 'w') as fh: fh.write('strain\tdate\tcountry\n') fh.write('SEQ_A\t2020-10-03\tUSA\n') record = next(read_table_to_dict(path, ('\t'))) assert record == expected_record def test_read_table_to_dict_with_tsv_from_stdin(self, mp_context, expected_record): stdin = StringIO('strain\tdate\tcountry\nSEQ_A\t2020-10-03\tUSA\n') mp_context.setattr('sys.stdin', stdin) record = next(read_table_to_dict(sys.stdin, ('\t'))) assert record == expected_record def test_read_table_to_dict_with_bad_delimiter(self, tmpdir): path = str(tmpdir / 'metadata.txt') with open(path, 'w') as fh: fh.write('strain date country\n') fh.write('SEQ_A 2020-10-03 USA\n') with pytest.raises(InvalidDelimiter): next(read_table_to_dict(path, (',', '\t'))) @pytest.mark.parametrize('id_column', ['strain', None]) def test_read_table_to_dict_with_duplicates(self, metadata_with_duplicate, id_column): with pytest.raises(AugurError) as e_info: list(read_table_to_dict(metadata_with_duplicate, ('\t'), id_column=id_column)) assert str(e_info.value) == f"Encountered record with duplicate id 'SEQ_A' in {metadata_with_duplicate!r}" @pytest.mark.parametrize('id_column', ['strain', None]) def test_read_table_to_dict_with_duplicates_error_all(self, metadata_with_duplicate, id_column): with pytest.raises(AugurError) as e_info: list(read_table_to_dict(metadata_with_duplicate, ('\t'), DataErrorMethod("error_all"), id_column=id_column)) assert str(e_info.value) == f"The following records are duplicated in {metadata_with_duplicate!r}:\n'SEQ_A'\n'SEQ_B'" @pytest.mark.parametrize('id_column', ['strain', None]) def test_read_table_to_dict_with_duplicates_warning(self, capsys, metadata_with_duplicate, id_column): list(read_table_to_dict(metadata_with_duplicate, ('\t'), DataErrorMethod('warn'), id_column=id_column)) captured = capsys.readouterr() assert captured.err == ( f"WARNING: Encountered record with duplicate id 'SEQ_A' in {metadata_with_duplicate!r}\n" f"WARNING: Encountered record with duplicate id 'SEQ_B' in {metadata_with_duplicate!r}\n" f"WARNING: The following records are duplicated in {metadata_with_duplicate!r}:\n'SEQ_A'\n'SEQ_B'\n" ) def test_read_table_to_dict_with_duplicates_silent(self, capsys, metadata_with_duplicate): list(read_table_to_dict(metadata_with_duplicate, ('\t'), DataErrorMethod('silent'))) assert "WARNING" not in capsys.readouterr().err def test_read_table_to_dict_with_duplicate_and_bad_id(self, metadata_with_duplicate): id_column = "bad_id" with pytest.raises(AugurError) as e_info: list(read_table_to_dict(metadata_with_duplicate, ('\t'), id_column=id_column)) assert str(e_info.value) == f"The provided id column {id_column!r} does not exist in {metadata_with_duplicate!r}." @pytest.fixture def fasta_file(tmpdir): path = str(tmpdir / 'sequences.fasta') with open(path, 'w') as fh: fh.writelines([ '>SEQ_A\nAAAA\n', '>SEQ_T\nTTTT\n', '>SEQ_C\nCCCC\n', '>SEQ_G\nGGGG\n' ]) return path @pytest.fixture def metadata_file(tmpdir): path = str(tmpdir / 'metadata.tsv') with open(path, 'w') as fh: fh.writelines([ 'strain\tcountry\tdate\n', 'SEQ_A\tUSA\t2020-10-01\n', 'SEQ_T\tUSA\t2020-10-02\n', 'SEQ_C\tUSA\t2020-10-03\n', 'SEQ_G\tUSA\t2020-10-04\n' ]) return path def unmatched_sequences(): return [ '>EXTRA_SEQ_A\nAAAAA\n', '>EXTRA_SEQ_T\nTTTTT\n' ] def unmatched_metadata(): return [ 'EXTRA_METADATA_A\tUSA\t2020-10-01\n', 'EXTRA_METADATA_T\tUSA\t2020-10-02\n', ] def dup_sequences(): return [ '>SEQ_A\nNNNN\n', '>SEQ_T\nNNNN\n', ] def dup_metadata(): return [ 'SEQ_C\tUSA\t2020-10-XX\n', 'SEQ_G\tUSA\t2020-10-XX\n', ] def copy_and_append_to_file(src, dst, appended_content): shutil.copy(src, dst) with open(dst, 'a') as fh: fh.writelines(appended_content) return dst @pytest.fixture def fasta_with_unmatched(tmpdir, fasta_file): path = str(tmpdir / 'extra-sequences.fasta') return copy_and_append_to_file(fasta_file, path, unmatched_sequences()) @pytest.fixture def metadata_with_unmatched(tmpdir, metadata_file): path = str(tmpdir / 'extra-metadata.tsv') return copy_and_append_to_file(metadata_file, path, unmatched_metadata()) @pytest.fixture def fasta_with_dup(tmpdir, fasta_file): path = str(tmpdir / 'dup-sequences.fasta') return copy_and_append_to_file(fasta_file, path, dup_sequences()) @pytest.fixture def metadata_with_dup(tmpdir, metadata_file): path = str(tmpdir / 'dup-metadata.tsv') return copy_and_append_to_file(metadata_file, path, dup_metadata()) @pytest.fixture def fasta_with_unmatched_and_dup(tmpdir, fasta_file): path = str(tmpdir / 'extra-and-dup-sequences.fasta') return copy_and_append_to_file(fasta_file, path, unmatched_sequences() + dup_sequences()) @pytest.fixture def metadata_with_unmatched_and_dup(tmpdir, metadata_file): path = str(tmpdir / 'extra-and-dup-metadata.tsv') return copy_and_append_to_file(metadata_file, path, dup_metadata() + unmatched_metadata()) #TODO: CHANGE ORDER HERE class TestReadMetadataWithSequence: def test_read_metadata_with_sequence(self, metadata_file, fasta_file): records = list(read_metadata_with_sequences(metadata_file, ('\t',), fasta_file, 'strain')) assert len(records) == 4 for record in records: seq_base = record['strain'].split("_")[-1].upper() expected_sequence = seq_base * 4 assert record['sequence'] == expected_sequence def test_read_metadata_with_sequences_with_bad_id(self, metadata_file, fasta_file): id_field = "bad_id" with pytest.raises(AugurError) as e_info: next(read_metadata_with_sequences(metadata_file, ('\t',), fasta_file, id_field)) assert str(e_info.value) == f"The provided sequence id column {id_field!r} does not exist in the metadata." def test_read_metadata_with_sequences_with_unmatched(self, metadata_with_unmatched, fasta_with_unmatched): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences(metadata_with_unmatched, ('\t',), fasta_with_unmatched, 'strain')) assert str(e_info.value) == "Encountered metadata record 'EXTRA_METADATA_A' without a matching sequence." def test_read_metadata_with_sequences_with_unmatched_error_all(self, metadata_with_unmatched, fasta_with_unmatched): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences( metadata_with_unmatched, ('\t',), fasta_with_unmatched, 'strain', unmatched_reporting=DataErrorMethod.ERROR_ALL)) assert str(e_info.value) == ( "Encountered the following error(s) when parsing metadata with sequences:\n" "The output may be incomplete because there were unmatched records.\n" "The following metadata records did not have a matching sequence:\n" "'EXTRA_METADATA_A'\n'EXTRA_METADATA_T'\n" "The following sequence records did not have a matching metadata record:\n" "'EXTRA_SEQ_A'\n'EXTRA_SEQ_T'" ) def test_read_metadata_with_sequences_with_unmatched_warning(self, capsys, metadata_with_unmatched, fasta_with_unmatched): records = list(read_metadata_with_sequences( metadata_with_unmatched, ('\t',), fasta_with_unmatched, 'strain', unmatched_reporting=DataErrorMethod.WARN)) assert len(records) == 4 assert [record['strain'] for record in records] == ['SEQ_A', 'SEQ_T', 'SEQ_C', 'SEQ_G'] captured = capsys.readouterr() assert captured.err == ( "WARNING: Encountered metadata record 'EXTRA_METADATA_A' without a matching sequence.\n" "WARNING: Encountered metadata record 'EXTRA_METADATA_T' without a matching sequence.\n" "WARNING: The output may be incomplete because there were unmatched records.\n" "The following metadata records did not have a matching sequence:\n" "'EXTRA_METADATA_A'\n'EXTRA_METADATA_T'\n" "The following sequence records did not have a matching metadata record:\n" "'EXTRA_SEQ_A'\n'EXTRA_SEQ_T'\n" ) def test_read_metadata_with_sequences_with_unmatched_silent(self, capsys, metadata_with_unmatched, fasta_with_unmatched): records = list(read_metadata_with_sequences( metadata_with_unmatched, ('\t',), fasta_with_unmatched, 'strain', unmatched_reporting=DataErrorMethod.SILENT)) assert len(records) == 4 assert [record['strain'] for record in records] == ['SEQ_A', 'SEQ_T', 'SEQ_C', 'SEQ_G'] assert "WARNING" not in capsys.readouterr().err def test_read_metadata_with_sequences_with_dup_metadata(self, metadata_with_dup, fasta_file): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences(metadata_with_dup, ('\t',), fasta_file, 'strain')) assert str(e_info.value) == "Encountered metadata record with duplicate id 'SEQ_C'." def test_read_metadata_with_sequences_with_dup_fasta(self, metadata_file, fasta_with_dup): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences(metadata_file, ('\t',), fasta_with_dup, 'strain')) assert str(e_info.value) == "Encountered sequence record with duplicate id 'SEQ_A'." def test_read_metadata_with_sequences_with_dup_both(self, metadata_with_dup, fasta_with_dup): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences(metadata_with_dup, ('\t',), fasta_with_dup, 'strain')) # Expected to error on first duplicate sequence since we check sequences first assert str(e_info.value) == "Encountered sequence record with duplicate id 'SEQ_A'." def test_read_metadata_with_sequences_with_dup_error_all(self, metadata_with_dup, fasta_with_dup): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences( metadata_with_dup, ('\t',), fasta_with_dup, 'strain', duplicate_reporting=DataErrorMethod.ERROR_ALL )) assert str(e_info.value) == ( "Encountered the following error(s) when parsing metadata with sequences:\n" "The output may not match expectations because there were records with duplicate sequence ids.\n" f"The following sequence ids were duplicated in {metadata_with_dup!r}:\n" "'SEQ_C'\n'SEQ_G'\n" f"The following sequence ids were duplicated in {fasta_with_dup!r}:\n" "'SEQ_A'\n'SEQ_T'" ) def test_read_metadata_with_sequences_with_dup_warn(self, capsys, metadata_with_dup, fasta_with_dup): records = list(read_metadata_with_sequences( metadata_with_dup, ('\t',), fasta_with_dup, 'strain', duplicate_reporting=DataErrorMethod.WARN )) assert len(records) == 6 assert [record['strain'] for record in records] == ['SEQ_A', 'SEQ_T', 'SEQ_C', 'SEQ_G', 'SEQ_C', 'SEQ_G'] captured = capsys.readouterr() assert captured.err == ( "WARNING: Encountered sequence record with duplicate id 'SEQ_A'.\n" "WARNING: Encountered sequence record with duplicate id 'SEQ_T'.\n" "WARNING: Encountered metadata record with duplicate id 'SEQ_C'.\n" "WARNING: Encountered metadata record with duplicate id 'SEQ_G'.\n" "WARNING: The output may not match expectations because there were records with duplicate sequence ids.\n" f"The following sequence ids were duplicated in {metadata_with_dup!r}:\n" "'SEQ_C'\n'SEQ_G'\n" f"The following sequence ids were duplicated in {fasta_with_dup!r}:\n" "'SEQ_A'\n'SEQ_T'\n" ) def test_read_metadata_with_sequences_with_dup_silent(self, capsys, metadata_with_dup, fasta_with_dup): records = list(read_metadata_with_sequences( metadata_with_dup, ('\t',), fasta_with_dup, 'strain', duplicate_reporting=DataErrorMethod.SILENT )) assert len(records) == 6 assert [record['strain'] for record in records] == ['SEQ_A', 'SEQ_T', 'SEQ_C', 'SEQ_G', 'SEQ_C', 'SEQ_G'] assert "WARNING" not in capsys.readouterr().err def test_read_metadata_with_sequences_with_extra_and_dup(self, metadata_with_unmatched_and_dup, fasta_with_unmatched_and_dup): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences(metadata_with_unmatched_and_dup, ('\t',), fasta_with_unmatched_and_dup, 'strain')) # Expected to error on first duplicate sequence since we check duplicate sequences first assert str(e_info.value) == "Encountered sequence record with duplicate id 'SEQ_A'." def test_read_metadata_with_sequences_with_extra_and_dup_error_all(self, metadata_with_unmatched_and_dup, fasta_with_unmatched_and_dup): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences( metadata_with_unmatched_and_dup, ('\t',), fasta_with_unmatched_and_dup, 'strain', unmatched_reporting=DataErrorMethod.ERROR_ALL, duplicate_reporting=DataErrorMethod.ERROR_ALL )) assert str(e_info.value) == ( "Encountered the following error(s) when parsing metadata with sequences:\n" "The output may not match expectations because there were records with duplicate sequence ids.\n" f"The following sequence ids were duplicated in {metadata_with_unmatched_and_dup!r}:\n" "'SEQ_C'\n'SEQ_G'\n" f"The following sequence ids were duplicated in {fasta_with_unmatched_and_dup!r}:\n" "'SEQ_A'\n'SEQ_T'\n" "The output may be incomplete because there were unmatched records.\n" "The following metadata records did not have a matching sequence:\n" "'EXTRA_METADATA_A'\n'EXTRA_METADATA_T'\n" "The following sequence records did not have a matching metadata record:\n" "'EXTRA_SEQ_A'\n'EXTRA_SEQ_T'" ) def test_read_metadata_with_sequences_with_extra_and_dup_warn_unmatched(self, capsys, metadata_with_unmatched_and_dup, fasta_with_unmatched_and_dup): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences( metadata_with_unmatched_and_dup, ('\t',), fasta_with_unmatched_and_dup, 'strain', unmatched_reporting=DataErrorMethod.WARN, duplicate_reporting=DataErrorMethod.ERROR_ALL )) # We should see warnings for the unmatched records before the error is raised captured = capsys.readouterr() assert captured.err == ( "WARNING: Encountered metadata record 'EXTRA_METADATA_A' without a matching sequence.\n" "WARNING: Encountered metadata record 'EXTRA_METADATA_T' without a matching sequence.\n" "WARNING: The output may be incomplete because there were unmatched records.\n" "The following metadata records did not have a matching sequence:\n" "'EXTRA_METADATA_A'\n'EXTRA_METADATA_T'\n" "The following sequence records did not have a matching metadata record:\n" "'EXTRA_SEQ_A'\n'EXTRA_SEQ_T'\n" ) assert str(e_info.value) == ( "Encountered the following error(s) when parsing metadata with sequences:\n" "The output may not match expectations because there were records with duplicate sequence ids.\n" f"The following sequence ids were duplicated in {metadata_with_unmatched_and_dup!r}:\n" "'SEQ_C'\n'SEQ_G'\n" f"The following sequence ids were duplicated in {fasta_with_unmatched_and_dup!r}:\n" "'SEQ_A'\n'SEQ_T'" ) def test_read_metadata_with_sequences_with_extra_and_dup_warn_dups(self, capsys, metadata_with_unmatched_and_dup, fasta_with_unmatched_and_dup): with pytest.raises(AugurError) as e_info: list(read_metadata_with_sequences( metadata_with_unmatched_and_dup, ('\t',), fasta_with_unmatched_and_dup, 'strain', unmatched_reporting=DataErrorMethod.ERROR_ALL, duplicate_reporting=DataErrorMethod.WARN )) # We should see warnings for the unmatched records before the error is raised captured = capsys.readouterr() assert captured.err == ( "WARNING: Encountered sequence record with duplicate id 'SEQ_A'.\n" "WARNING: Encountered sequence record with duplicate id 'SEQ_T'.\n" "WARNING: Encountered metadata record with duplicate id 'SEQ_C'.\n" "WARNING: Encountered metadata record with duplicate id 'SEQ_G'.\n" "WARNING: The output may not match expectations because there were records with duplicate sequence ids.\n" f"The following sequence ids were duplicated in {metadata_with_unmatched_and_dup!r}:\n" "'SEQ_C'\n'SEQ_G'\n" f"The following sequence ids were duplicated in {fasta_with_unmatched_and_dup!r}:\n" "'SEQ_A'\n'SEQ_T'\n" ) assert str(e_info.value) == ( "Encountered the following error(s) when parsing metadata with sequences:\n" "The output may be incomplete because there were unmatched records.\n" "The following metadata records did not have a matching sequence:\n" "'EXTRA_METADATA_A'\n'EXTRA_METADATA_T'\n" "The following sequence records did not have a matching metadata record:\n" "'EXTRA_SEQ_A'\n'EXTRA_SEQ_T'" ) def test_read_metadata_with_sequences_with_extra_and_dup_warn_both(self, capsys, metadata_with_unmatched_and_dup, fasta_with_unmatched_and_dup): records = list(read_metadata_with_sequences( metadata_with_unmatched_and_dup, ('\t',), fasta_with_unmatched_and_dup, 'strain', unmatched_reporting=DataErrorMethod.WARN, duplicate_reporting=DataErrorMethod.WARN )) assert len(records) == 6 assert [record['strain'] for record in records] == ['SEQ_A', 'SEQ_T', 'SEQ_C', 'SEQ_G', 'SEQ_C', 'SEQ_G'] captured = capsys.readouterr() assert captured.err == ( "WARNING: Encountered sequence record with duplicate id 'SEQ_A'.\n" "WARNING: Encountered sequence record with duplicate id 'SEQ_T'.\n" "WARNING: Encountered metadata record with duplicate id 'SEQ_C'.\n" "WARNING: Encountered metadata record with duplicate id 'SEQ_G'.\n" "WARNING: Encountered metadata record 'EXTRA_METADATA_A' without a matching sequence.\n" "WARNING: Encountered metadata record 'EXTRA_METADATA_T' without a matching sequence.\n" "WARNING: The output may not match expectations because there were records with duplicate sequence ids.\n" f"The following sequence ids were duplicated in {metadata_with_unmatched_and_dup!r}:\n" "'SEQ_C'\n'SEQ_G'\n" f"The following sequence ids were duplicated in {fasta_with_unmatched_and_dup!r}:\n" "'SEQ_A'\n'SEQ_T'\n" "WARNING: The output may be incomplete because there were unmatched records.\n" "The following metadata records did not have a matching sequence:\n" "'EXTRA_METADATA_A'\n'EXTRA_METADATA_T'\n" "The following sequence records did not have a matching metadata record:\n" "'EXTRA_SEQ_A'\n'EXTRA_SEQ_T'\n" ) @pytest.fixture def output_records(): return iter([ {"strain": "SEQ_A", "country": "USA", "date": "2020-10-01"}, {"strain": "SEQ_T", "country": "USA", "date": "2020-10-02"} ]) @pytest.fixture def expected_output_tsv(): return ( "strain\tcountry\tdate\n" "SEQ_A\tUSA\t2020-10-01\n" "SEQ_T\tUSA\t2020-10-02\n" ) class TestWriteRecordsToTsv: def test_write_records_to_tsv(self, tmpdir, output_records, expected_output_tsv): output_tsv = tmpdir / "output.tsv" write_records_to_tsv(output_records, output_tsv) with open(output_tsv, 'r') as output_fh: assert output_fh.read() == expected_output_tsv def test_write_records_to_tsv_stdout(self, capsys, output_records, expected_output_tsv): write_records_to_tsv(output_records, '-') captured = capsys.readouterr() assert captured.out == expected_output_tsv def test_write_records_to_tsv_with_extra_keys(self, capsys): records_with_extra_keys = iter([ {"key_1": "value_1", "key_2": "value_2"}, {"key_1": "value_1", "key_2": "value_2", "key_3": "value_3"} ]) write_records_to_tsv(records_with_extra_keys, '-') captured = capsys.readouterr() assert captured.out == ( "key_1\tkey_2\n" "value_1\tvalue_2\n" "value_1\tvalue_2\n" ) def test_write_records_to_tsv_with_missing_keys(self, capsys): records_with_missing_keys = iter([ {"key_1": "value_1", "key_2": "value_2"}, {"key_2": "value_2"} ]) write_records_to_tsv(records_with_missing_keys, '-') captured = capsys.readouterr() assert captured.out == ( "key_1\tkey_2\n" "value_1\tvalue_2\n" "\tvalue_2\n" ) def test_write_records_to_tsv_with_empty_records(self, tmpdir): output_file = tmpdir / "output.tsv" with pytest.raises(AugurError) as e_info: write_records_to_tsv(iter([]), output_file) assert str(e_info.value) == f"Unable to write records to {output_file} because provided records were empty." def write_lines(tmpdir, lines): path = str(tmpdir / "tmp") with open(path, 'w') as f: f.writelines(lines) return path class TestMetadataClass: def test_attributes(self, metadata_file): """All attributes are populated.""" m = Metadata(metadata_file, delimiters=[',', '\t'], id_columns=['invalid', 'strain']) assert m.path == metadata_file assert m.delimiter == '\t' assert m.columns == ['strain', 'country', 'date'] assert m.id_column == 'strain' def test_invalid_delimiter(self, metadata_file): """Failure to detect delimiter raises an error.""" with pytest.raises(InvalidDelimiter): Metadata(metadata_file, delimiters=[':'], id_columns=['strain']) def test_invalid_id_column(self, metadata_file): """Failure to detect an ID column raises an error.""" with pytest.raises(AugurError): Metadata(metadata_file, delimiters=['\t'], id_columns=['strains']) def test_rows(self, metadata_file): """Check Metadata.rows() output format.""" m = Metadata(metadata_file, delimiters=['\t'], id_columns=['strain']) assert list(m.rows()) == [ {'country': 'USA', 'date': '2020-10-01', 'strain': 'SEQ_A'}, {'country': 'USA', 'date': '2020-10-02', 'strain': 'SEQ_T'}, {'country': 'USA', 'date': '2020-10-03', 'strain': 'SEQ_C'}, {'country': 'USA', 'date': '2020-10-04', 'strain': 'SEQ_G'}, ] def test_blank_lines(self, tmpdir): """Check behavior of lines that are blank and have empty values. Blank lines are skipped. Lines with delimiters but empty values are still included when reading. """ path = write_lines(tmpdir, [ 'a,b,c\n', '1,2,3\n', '\n', '3,2,3\n', ',,\n', '5,2,3\n', ]) m = Metadata(path, delimiters=',', id_columns=['a']) assert list(m.rows()) == [ {'a': '1', 'b': '2', 'c': '3'}, {'a': '3', 'b': '2', 'c': '3'}, {'a': '' , 'b': '' , 'c': '' }, {'a': '5', 'b': '2', 'c': '3'} ] def test_rows_strict_extra(self, tmpdir): """Test behavior when reading rows with extra entries or delimiters.""" path = write_lines(tmpdir, [ 'a,b,c\n', '1,2,3\n', '2,2,3,4\n', '3,2,3,\n', ]) m = Metadata(path, delimiters=',', id_columns=['a']) with pytest.raises(AugurError): list(m.rows(strict=True)) assert list(m.rows(strict=False)) == [ {'a': '1', 'b': '2', 'c': '3'}, {'a': '2', 'b': '2', 'c': '3', None: ['4']}, {'a': '3', 'b': '2', 'c': '3', None: ['']}, ] def test_rows_strict_missing(self, tmpdir): """Test behavior when reading rows with missing entries or delimiters.""" path = write_lines(tmpdir, [ 'a,b,c\n', '1,2,3\n', '2,2,\n', '3,2\n', ]) m = Metadata(path, delimiters=',', id_columns=['a']) with pytest.raises(AugurError): list(m.rows(strict=True)) assert list(m.rows(strict=False)) == [ {'a': '1', 'b': '2', 'c': '3'}, {'a': '2', 'b': '2', 'c': ''}, {'a': '3', 'b': '2', 'c': None}, ] augur-24.2.2/tests/io/test_sequences.py000066400000000000000000000211311456376326500201200ustar00rootroot00000000000000#!/usr/bin/env python3 from Bio import SeqIO from Bio.Seq import Seq from Bio.SeqRecord import SeqRecord import bz2 import gzip import lzma from pathlib import Path import pytest import random from augur.errors import AugurError import augur.io.sequences def random_seq(k): """Generate a single random sequence of nucleotides of length k. """ return "".join(random.choices(("A","T","G","C"), k=k)) def generate_sequences(n, k=10): """Generate n random sequences of length k. """ return ( SeqRecord(Seq(random_seq(k)), id=f"SEQ_{i}") for i in range(1, n + 1) ) @pytest.fixture def sequences(): return list(generate_sequences(3)) @pytest.fixture def sequences_generator(): return generate_sequences(3) @pytest.fixture def fasta_filename(tmpdir, sequences): filename = str(tmpdir / "sequences.fasta") SeqIO.write(sequences, filename, "fasta") return filename @pytest.fixture def additional_fasta_filename(tmpdir, sequences): filename = str(tmpdir / "additional_sequences.fasta") SeqIO.write(sequences, filename, "fasta") return filename @pytest.fixture def gzip_fasta_filename(tmpdir, sequences): filename = str(tmpdir / "sequences.fasta.gz") with gzip.open(filename, "wt") as oh: SeqIO.write(sequences, oh, "fasta") return filename @pytest.fixture def bzip2_fasta_filename(tmpdir, sequences): filename = str(tmpdir / "sequences.fasta.bz2") with bz2.open(filename, "wt") as oh: SeqIO.write(sequences, oh, "fasta") return filename @pytest.fixture def lzma_fasta_filename(tmpdir, sequences): filename = str(tmpdir / "sequences.fasta.xz") with lzma.open(filename, "wt") as oh: SeqIO.write(sequences, oh, "fasta") return filename @pytest.fixture def genbank_reference(): return "tests/data/zika_outgroup.gb" class TestReadSequences: def test_read_sequences_from_single_file(self, fasta_filename): sequences = augur.io.sequences.read_sequences(fasta_filename, format="fasta") assert len(list(sequences)) == 3 def test_read_sequences_from_multiple_files(self, fasta_filename, additional_fasta_filename): sequences = augur.io.sequences.read_sequences(fasta_filename, additional_fasta_filename, format="fasta") assert len(list(sequences)) == 6 def test_read_sequences_from_multiple_files_or_buffers(self, fasta_filename, additional_fasta_filename): with open(fasta_filename) as fasta_handle: sequences = augur.io.sequences.read_sequences(fasta_handle, additional_fasta_filename, format="fasta") assert len(list(sequences)) == 6 def test_read_single_fasta_record(self, fasta_filename): record = next(augur.io.sequences.read_sequences(fasta_filename, format="fasta")) assert record.id == "SEQ_1" def test_read_single_genbank_record(self, genbank_reference): reference = next(augur.io.sequences.read_sequences(genbank_reference, format="genbank")) assert reference.id == "KX369547.1" def test_read_single_genbank_record_from_a_path(self, genbank_reference): reference = next(augur.io.sequences.read_sequences(Path(genbank_reference), format="genbank")) assert reference.id == "KX369547.1" def test_read_sequences_from_single_gzip_file(self, gzip_fasta_filename): sequences = augur.io.sequences.read_sequences(gzip_fasta_filename, format="fasta") assert len(list(sequences)) == 3 def test_read_sequences_from_single_lzma_file(self, lzma_fasta_filename): sequences = augur.io.sequences.read_sequences(lzma_fasta_filename, format="fasta") assert len(list(sequences)) == 3 def test_read_sequences_from_single_bzip2_file(self, bzip2_fasta_filename): sequences = augur.io.sequences.read_sequences(bzip2_fasta_filename, format="fasta") assert len(list(sequences)) == 3 def test_read_sequences_from_multiple_files_with_different_compression(self, fasta_filename, gzip_fasta_filename, lzma_fasta_filename): sequences = augur.io.sequences.read_sequences(fasta_filename, gzip_fasta_filename, lzma_fasta_filename, format="fasta") assert len(list(sequences)) == 9 class TestWriteSequences: def test_write_sequences(self, tmpdir, sequences): output_filename = Path(tmpdir) / Path("new_sequences.fasta") sequences_written = augur.io.sequences.write_sequences(sequences, output_filename, "fasta") assert sequences_written == len(sequences) def test_write_genbank_sequence(self, tmpdir, genbank_reference): output_filename = Path(tmpdir) / Path("new_sequences.fasta") reference = SeqIO.read(genbank_reference, "genbank") sequences_written = augur.io.sequences.write_sequences([reference], output_filename, "genbank") assert sequences_written == 1 def test_write_sequences_from_generator(self, tmpdir, sequences_generator): output_filename = Path(tmpdir) / Path("new_sequences.fasta") sequences_written = augur.io.sequences.write_sequences(sequences_generator, output_filename, "fasta") assert sequences_written == 3 def test_write_single_set_of_sequences_to_gzip_file(self, tmpdir, sequences): output_filename = Path(tmpdir) / Path("new_sequences.fasta.gz") sequences_written = augur.io.sequences.write_sequences(sequences, output_filename, "fasta") assert sequences_written == len(sequences) with gzip.open(output_filename, "rt") as handle: assert sequences_written == len([line for line in handle if line.startswith(">")]) def test_write_single_set_of_sequences_to_bzip2_file(self, tmpdir, sequences): output_filename = Path(tmpdir) / Path("new_sequences.fasta.bz2") sequences_written = augur.io.sequences.write_sequences(sequences, output_filename, "fasta") assert sequences_written == len(sequences) with bz2.open(output_filename, "rt") as handle: assert sequences_written == len([line for line in handle if line.startswith(">")]) def test_write_single_set_of_sequences_to_lzma_file(self, tmpdir, sequences): output_filename = Path(tmpdir) / Path("new_sequences.fasta.xz") sequences_written = augur.io.sequences.write_sequences(sequences, output_filename, "fasta") assert sequences_written == len(sequences) with lzma.open(output_filename, "rt") as handle: assert sequences_written == len([line for line in handle if line.startswith(">")]) def test_write_sequences_by_external_handle(self, tmpdir, sequences): output_filename = Path(tmpdir) / Path("new_sequences.fasta") with open(output_filename, "w") as handle: total_sequences_written = 0 for sequence in sequences: sequences_written = augur.io.sequences.write_sequences( sequence, handle ) total_sequences_written += sequences_written with open(output_filename, "r") as handle: assert total_sequences_written == len([line for line in handle if line.startswith(">")]) @pytest.fixture() def sequence_records(): return [ {"strain": "SEQ_A", "sequence": "AAAA"}, {"strain": "SEQ_T", "sequence": "TTTT"}, {"strain": "SEQ_C", "sequence": "CCCC"}, {"strain": "SEQ_G", "sequence": "GGGG"}, ] class TestWriteFastaFromRecords: def test_write_records_to_fasta(self, tmpdir, sequence_records): output_fasta = str(tmpdir / "sequences.fasta") records = list(augur.io.sequences.write_records_to_fasta(sequence_records, output_fasta)) assert all("sequence" not in record for record in records) with open(output_fasta, 'r') as handle: assert len(records) == len([line for line in handle if line.startswith(">")]) def test_write_records_to_fasta_with_bad_id_field(self, tmpdir, sequence_records): output_fasta = str(tmpdir / "sequences.fasta") seq_id_field = "bogus_id" with pytest.raises(AugurError) as e_info: list(augur.io.sequences.write_records_to_fasta(sequence_records, output_fasta, seq_id_field=seq_id_field)) assert str(e_info.value) == f"Provided sequence identifier field {seq_id_field!r} does not exist." def test_write_records_to_fasta_with_bad_seq_field(self, tmpdir, sequence_records): output_fasta = str(tmpdir / "sequences.fasta") seq_field = "bogus_sequence" with pytest.raises(AugurError) as e_info: list(augur.io.sequences.write_records_to_fasta(sequence_records, output_fasta, seq_field=seq_field)) assert str(e_info.value) == f"Provided sequence field {seq_field!r} does not exist." augur-24.2.2/tests/io/test_shell_command_runner.py000066400000000000000000000052121456376326500223250ustar00rootroot00000000000000import os import re import subprocess from augur.io.shell_command_runner import ShellCommandRunner import pytest class TestShellCommandRunner: def test_run_exception_no_raise(self, mocker): mocker.patch( "subprocess.check_output", side_effect=subprocess.CalledProcessError(5, "actual-cmd"), ) assert ShellCommandRunner("great-command", raise_errors=False).run() is False def test_run_exception_raise(self, mocker): mocker.patch( "subprocess.check_output", side_effect=subprocess.CalledProcessError(5, "actual-cmd"), ) with pytest.raises(subprocess.CalledProcessError): ShellCommandRunner("great-command", raise_errors=True).run() def test_modified_env(self): modified_env = ShellCommandRunner( "great-command", extra_env={"a": 5} ).modified_env assert modified_env["a"] == 5 assert modified_env["HOME"] == os.getenv("HOME") @pytest.mark.parametrize( "exception, expected_message", [ ( subprocess.CalledProcessError(5, "actual-cmd", output=b"some error"), "Shell exited 5 when running: cmd.*?some error", ), ( subprocess.CalledProcessError(-15, "actual-cmd"), "Shell exited from fatal signal SIGTERM when running: cmd", ), ( subprocess.CalledProcessError(128 + 15, "actual-cmd"), "Shell exited from fatal signal SIGTERM when running: cmd", ), ( subprocess.CalledProcessError(128 + 9, "actual-cmd"), "Shell exited from fatal signal SIGKILL when running: cmd.*out-of-memory", ), ( # Unknown signal doesn't cause exception subprocess.CalledProcessError(-120, "actual-cmd"), "Shell exited -120 when running: cmd", ), ( FileNotFoundError(), "Unable to run shell commands using /bin/bash", ), ( Exception("generic or other exception"), "generic or other exception", ) ] ) def test_print_error_message(self, mocker, exception, expected_message): mock_print_error = mocker.patch( "augur.io.shell_command_runner.ShellCommandRunner.print_error" ) ShellCommandRunner("cmd").print_error_message(exception) assert re.search( expected_message, mock_print_error.call_args[0][0], re.MULTILINE | re.DOTALL ) augur-24.2.2/tests/io/test_strains.py000066400000000000000000000013071456376326500176130ustar00rootroot00000000000000from pathlib import Path from augur.io.strains import read_strains def test_read_strains(tmpdir): # Write one list of filenames with some unnecessary whitespace. strains1 = Path(tmpdir) / Path("strains1.txt") with open(strains1, "w") as oh: oh.write("strain1 # this is an inline comment about strain 1\nstrain2\n # this is a comment preceded by whitespace.\n") # Write another list of filenames with a comment. strains2 = Path(tmpdir) / Path("strains2.txt") with open(strains2, "w") as oh: oh.write("# this is a comment. ignore this.\nstrain2\nstrain3\n") strains = read_strains(strains1, strains2) assert len(strains) == 3 assert "strain1" in strains augur-24.2.2/tests/io/test_vcf.py000066400000000000000000000054431456376326500167130ustar00rootroot00000000000000import pytest import augur.io.vcf from treetime.vcf_utils import read_vcf @pytest.fixture def mock_run_shell_command(mocker): mocker.patch("augur.io.vcf.run_shell_command") class TestVCF: # The `read_vcf` functionality used to be in an augur module when these # tests were originally written but we now use TreeTime's function of the # same name. The tests remain here to protect against any unforeseen changes. def test_read_vcf_compressed(self): seq_keep = list(read_vcf("tests/data/tb_lee_2015.vcf.gz")['sequences'].keys()) assert len(seq_keep) == 150 assert seq_keep[149] == "G22733" def test_read_vcf_uncompressed(self): seq_keep = list(read_vcf("tests/data/tb_lee_2015.vcf")['sequences'].keys()) assert len(seq_keep) == 150 assert seq_keep[149] == "G22733" def test_write_vcf_compressed_input(self, mock_run_shell_command): augur.io.vcf.write_vcf( "tests/data/tb_lee_2015.vcf.gz", "output_file.vcf.gz", [] ) augur.io.vcf.run_shell_command.assert_called_once_with( "vcftools --gzvcf tests/data/tb_lee_2015.vcf.gz --recode --stdout | gzip -c > output_file.vcf.gz", raise_errors=True, ) def test_write_vcf_uncompressed_input(self, mock_run_shell_command): augur.io.vcf.write_vcf( "tests/data/tb_lee_2015.vcf", "output_file.vcf.gz", [] ) augur.io.vcf.run_shell_command.assert_called_once_with( "vcftools --vcf tests/data/tb_lee_2015.vcf --recode --stdout | gzip -c > output_file.vcf.gz", raise_errors=True, ) def test_write_vcf_compressed_output(self, mock_run_shell_command): augur.io.vcf.write_vcf( "tests/data/tb_lee_2015.vcf", "output_file.vcf.gz", [] ) augur.io.vcf.run_shell_command.assert_called_once_with( "vcftools --vcf tests/data/tb_lee_2015.vcf --recode --stdout | gzip -c > output_file.vcf.gz", raise_errors=True, ) def test_write_vcf_uncompressed_output(self, mock_run_shell_command): augur.io.vcf.write_vcf( "tests/data/tb_lee_2015.vcf", "output_file.vcf", [] ) augur.io.vcf.run_shell_command.assert_called_once_with( "vcftools --vcf tests/data/tb_lee_2015.vcf --recode --stdout > output_file.vcf", raise_errors=True, ) def test_write_vcf_dropped_samples(self, mock_run_shell_command): augur.io.vcf.write_vcf( "tests/data/tb_lee_2015.vcf", "output_file.vcf", ["x", "y", "z"] ) augur.io.vcf.run_shell_command.assert_called_once_with( "vcftools --remove-indv x --remove-indv y --remove-indv z --vcf tests/data/tb_lee_2015.vcf --recode --stdout > output_file.vcf", raise_errors=True, ) augur-24.2.2/tests/test_align.py000066400000000000000000000622761456376326500166270ustar00rootroot00000000000000import argparse import functools import os import pytest import pathlib from shlex import quote from Bio import SeqIO from Bio.Align import MultipleSeqAlignment from Bio.Seq import Seq from Bio.Seq import MutableSeq from Bio.SeqRecord import SeqRecord from augur import align def write_strains(tmpdir, name, strains): path = str(tmpdir / name + ".fasta") with open(path, "w") as fh: SeqIO.write(strains, fh, "fasta") return path @pytest.fixture def ref_seq(): return SeqRecord(Seq("aaaaTT-Tg-ggCCCC"), "REF") @pytest.fixture def test_seqs(ref_seq): return { "PREFIX": SeqRecord(ref_seq.seq[3:], "PREFIX"), "SUFFIX": SeqRecord(ref_seq.seq[:-3], "SUFFIX"), "LONGER": SeqRecord("CCC" + ref_seq.seq + "AAA", "LONGER") } @pytest.fixture def existing_aln(ref_seq): return { "EXISTING1": SeqRecord("NN" + ref_seq.seq[2:-3] + "NNN", "EXISTING1"), "EXISTING2": SeqRecord("NNN" + ref_seq.seq[3:-1] + "N", "EXISTING2") } @pytest.fixture def ref_file(tmpdir, ref_seq): return write_strains(tmpdir, "ref", ref_seq) @pytest.fixture def test_file(tmpdir, test_seqs): return write_strains(tmpdir, "test", test_seqs.values()) @pytest.fixture def test_with_ref(tmpdir, test_seqs, ref_seq): return write_strains(tmpdir, "test_w_ref", [ref_seq,] + list(test_seqs.values())) @pytest.fixture def existing_file(tmpdir, existing_aln): return write_strains(tmpdir, "existing", existing_aln.values()) @pytest.fixture def existing_with_ref(tmpdir, existing_aln, ref_seq): return write_strains(tmpdir, "existing_w_ref", [ref_seq,] + list(existing_aln.values())) @pytest.fixture def out_file(tmpdir): out_file = str(tmpdir / "out") open(out_file, "w").close() return out_file @pytest.fixture def argparser(): """Provide an easy way to test command line arguments""" parser = argparse.ArgumentParser() align.register_arguments(parser) def parse(args): return parser.parse_args(args.split(" ")) return parse @pytest.fixture def run(argparser, out_file): def run(args): args = argparser(args + " -o %s" % out_file) align.run(args) return SeqIO.to_dict(SeqIO.parse(out_file, "fasta")) return run @pytest.fixture def mp_context(monkeypatch): #This should be moved to conftest once #512 is merged with monkeypatch.context() as mp: yield mp class TestAlign: def test_make_gaps_ambiguous(self): alignment = MultipleSeqAlignment( [SeqRecord(Seq("G-AC")), SeqRecord(Seq("----")), SeqRecord(Seq("TAGC"))] ) align.make_gaps_ambiguous(alignment) assert [seq_record.seq for seq_record in alignment] == [ Seq("GNAC"), Seq("NNNN"), Seq("TAGC"), ] def test_check_duplicates_no_arguments(self): assert align.check_duplicates() is None def test_check_duplicates_strings_with_no_duplicates(self): assert align.check_duplicates("GTAC", "CGTT") is None def test_check_duplicates_MSA_with_no_duplicates(self): alignment = MultipleSeqAlignment( [ SeqRecord(Seq("GTAC"), name="seq1"), SeqRecord(Seq("CGTT"), name="seq2"), SeqRecord(Seq("TAGC"), name="seq3"), ] ) assert align.check_duplicates(alignment) is None def test_check_duplicates_MSA_and_string_with_no_duplicates(self): alignment = MultipleSeqAlignment( [ SeqRecord(Seq("GTAC"), name="seq1"), SeqRecord(Seq("CGTT"), name="seq2"), SeqRecord(Seq("TAGC"), name="seq3"), ] ) assert align.check_duplicates(alignment, "TGTT") is None def test_check_duplicates_string_with_duplicates(self): with pytest.raises(align.AlignmentError): assert align.check_duplicates("GTAC", "CGTT", "CGTT") def test_check_duplicates_MSA_with_duplicates(self): alignment = MultipleSeqAlignment( [ SeqRecord(Seq("GTAC"), name="seq1"), SeqRecord(Seq("CGTT"), name="seq2"), SeqRecord(Seq("TAGC"), name="seq3"), SeqRecord(Seq("TAGC"), name="seq3"), ] ) with pytest.raises(align.AlignmentError): assert align.check_duplicates(alignment) def test_check_duplicates_MSA_and_string_with_duplicates(self): alignment = MultipleSeqAlignment( [ SeqRecord(Seq("GTAC"), name="seq1"), SeqRecord(Seq("CGTT"), name="seq2"), SeqRecord(Seq("TAGC"), name="seq3"), ] ) with pytest.raises(align.AlignmentError): assert align.check_duplicates(alignment, "seq3") def test_prune_seqs_matching_alignment(self): sequence = { "seq1": SeqRecord(Seq("GTAC"), name="seq1"), "seq2": SeqRecord(Seq("CGTT"), name="seq2"), "seq3": SeqRecord(Seq("TAGC"), name="seq3"), } alignment = MultipleSeqAlignment( [ SeqRecord(Seq("GTAC"), name="seq1"), SeqRecord(Seq("TAGC"), name="seq3"), ] ) result = align.prune_seqs_matching_alignment(sequence.values(), alignment) assert [r.name for r in result] == ["seq2"] for r in result: assert r.seq == sequence[r.name].seq def test_prettify_alignment(self): data_file = pathlib.Path('tests/data/align/test_aligned_sequences.fasta') alignment = align.read_alignment(str(data_file.resolve())) seqs = {s.id:s for s in alignment} assert "_R_crick_strand" in seqs align.prettify_alignment(alignment) seqs = {s.id:s for s in alignment} assert "crick_strand" in seqs def test_generate_alignment_cmd_non_mafft(self): with pytest.raises(align.AlignmentError): assert align.generate_alignment_cmd('no-mafft', 1, None, None, None, None) def test_generate_alignment_cmd_mafft_existing_aln_fname(self): existing_aln_fname = "existing_aln" seqs_to_align_fname = "seqs_to_align" aln_fname = "aln_fname" log_fname = "log_fname" result = align.generate_alignment_cmd("mafft", 1, existing_aln_fname, seqs_to_align_fname, aln_fname, log_fname) expected = "mafft --add %s --keeplength --reorder --anysymbol --nomemsave --adjustdirection --thread %d %s 1> %s 2> %s" % (quote(seqs_to_align_fname), 1, quote(existing_aln_fname), quote(aln_fname), quote(log_fname)) assert result == expected def test_generate_alignment_cmd_mafft_no_existing_aln_fname(self): seqs_to_align_fname = "seqs_to_align" aln_fname = "aln_fname" log_fname = "log_fname" result = align.generate_alignment_cmd("mafft", 1, None, seqs_to_align_fname, aln_fname, log_fname) expected = "mafft --reorder --anysymbol --nomemsave --adjustdirection --thread %d %s 1> %s 2> %s" % (1, quote(seqs_to_align_fname), quote(aln_fname), quote(log_fname)) assert result == expected def test_read_alignment(self): data_file = pathlib.Path('tests/data/align/test_aligned_sequences.fasta') result = align.read_alignment(str(data_file.resolve())) assert len(result) == 4 def test_read_sequences(self): data_file = pathlib.Path('tests/data/align/test_aligned_sequences.fasta') result = align.read_sequences(str(data_file)) assert len(result) == 4 def test_read_seq_compare(self): data_file = pathlib.Path("tests/data/align/aa-seq_h3n2_ha_2y_2HA1_dup.fasta") with pytest.raises(align.AlignmentError): assert align.read_sequences(str(data_file)) def test_prepare_no_alignment_or_ref(self, test_file, test_seqs, out_file): _, output, _ = align.prepare([test_file,], None, out_file, None, None) assert os.path.isfile(output), "Didn't write sequences where it said" for name, seq in SeqIO.to_dict(SeqIO.parse(output, "fasta")).items(): assert seq.seq == test_seqs[name].seq def test_prepare_no_alignment_with_named_ref_missing(self, test_file, ref_seq): """We're given a ref_name, but it does not exist in the test file""" with pytest.raises(align.AlignmentError): align.prepare([test_file,], None, "dontcare", ref_seq.id, None) def test_prepare_with_alignment_with_named_ref_missing(self, test_with_ref, existing_file, ref_seq): """We're given a ref_name and an existing alignment, but the ref doesn't exist in the existing alignment.""" with pytest.raises(align.AlignmentError): align.prepare([test_with_ref,], existing_file, "dontcare", ref_seq.id, None) def test_prepare_no_alignment_with_ref_file(self, test_file, test_seqs, ref_file, ref_seq, out_file): _, output_fn, ref_name = align.prepare([test_file,], None, out_file, None, ref_file) assert ref_name == ref_seq.id, "Didn't return strain name from refrence file" assert os.path.isfile(output_fn), "Didn't write sequences where it said" output = list(SeqIO.parse(output_fn, "fasta")) # order matters assert output[0].id == ref_seq.id, "Reference sequence is not the first sequence in ouput file!" output_names = {record.name for record in output} assert all(name in output_names for name in test_seqs), "Some test sequences dropped unexpectedly" for record in output[1:]: assert record.seq == test_seqs[record.id].seq, "Some test sequences changed unexpectedly" def test_prepare_no_alignment_with_ref_name(self, test_with_ref, test_seqs, ref_seq, out_file): _, output_fn, _ = align.prepare([test_with_ref,], None, out_file, ref_seq.id, None) assert os.path.isfile(output_fn), "Didn't write sequences where it said" output = SeqIO.to_dict(SeqIO.parse(output_fn, "fasta")) assert output[ref_seq.id].seq == ref_seq.seq, "Reference sequence was not added to test sequences" for seq in test_seqs: assert seq in output, "Some test sequences dropped unexpectedly" assert output[seq].seq == test_seqs[seq].seq, "Some test sequences changed unexpectedly" def test_prepare_with_alignment_with_ref_name(self, test_file, test_seqs, existing_with_ref, existing_aln, ref_seq, out_file): """Test that, given a set of test sequences, an existing alignment, and a reference sequence name, no changes are made.""" aln_outfile, seqs_outfile, _ = align.prepare([test_file,], existing_with_ref, out_file, ref_seq.id, None) assert os.path.isfile(aln_outfile), "Didn't write existing alignment where it said" assert aln_outfile == existing_with_ref, "Rewrote the alignment file unexpectedly" # Alignment file should be unchanged aln_output = SeqIO.to_dict(SeqIO.parse(aln_outfile, "fasta")) assert aln_output[ref_seq.id].seq == ref_seq.seq, "Reference sequence dropped from alignment" for seq in existing_aln: assert seq in aln_output, "Some existing alignment sequences dropped unexpectedly" assert aln_output[seq].seq == existing_aln[seq].seq, "Some existing alignment sequences changed unexpectedly" # test sequences should be unchanged assert os.path.isfile(seqs_outfile), "Didn't write test sequences where it said" seq_output = SeqIO.to_dict(SeqIO.parse(seqs_outfile, "fasta")) for seq in test_seqs: assert seq in seq_output, "Some test sequences unexpectedly dropped" assert seq_output[seq].seq == test_seqs[seq].seq, "Some test sequences changed unexpectedly" assert seq_output.keys() == test_seqs.keys() def test_prepare_with_alignment_with_ref_seq(self, test_file, test_seqs, existing_file, existing_aln, ref_seq, ref_file, out_file): """Test that, given a set of test sequences, an existing alignment, and a reference sequence, the reference is added to the existing alignment and no other changes are made.""" aln_outfile, seqs_outfile, ref_name = align.prepare([test_file,], existing_file, out_file, None, ref_file) assert ref_name == ref_seq.id, "Didn't return strain name from refrence file" assert os.path.isfile(aln_outfile), "Didn't write existing alignment where it said" assert aln_outfile != existing_aln, "Unexpectedly overwrote existing alignment" # Alignment file should have the reference added aln_output = SeqIO.to_dict(SeqIO.parse(aln_outfile, "fasta")) assert aln_output[ref_seq.id].seq == ref_seq.seq, "Reference sequence not added to alignment" for seq in existing_aln: assert seq in aln_output, "Some existing alignment sequences dropped unexpectedly" assert aln_output[seq].seq == existing_aln[seq].seq, "Some existing alignment sequences changed unexpectedly" # test sequences should be unchanged assert os.path.isfile(seqs_outfile), "Didn't write test sequences where it said" seq_output = SeqIO.to_dict(SeqIO.parse(seqs_outfile, "fasta")) for seq in test_seqs: assert seq in seq_output, "Some test sequences unexpectedly dropped" assert seq_output[seq].seq == test_seqs[seq].seq, "Some test sequences changed unexpectedly" assert seq_output.keys() == test_seqs.keys() def test_prepare_no_alignment_multiple_test_seqs(self, test_file, test_seqs, ref_file, ref_seq, out_file): """Test that we can pass multiple sequence files to prepare() and get one unified file back""" # bit of a kludge, but gets us the reference strain in the input files _, seq_outfile, _ = align.prepare([test_file, ref_file], None, out_file, ref_seq.id, None) seq_output = SeqIO.to_dict(SeqIO.parse(seq_outfile, "fasta")) assert seq_output.keys() == set(test_seqs.keys()) | {ref_seq.id}, "Did not combine the two files" assert seq_output[ref_seq.id].seq == ref_seq.seq, "Missing sequence from second file" for seq in test_seqs: assert seq in seq_output, "Some test sequences unexpectedly dropped" assert seq_output[seq].seq == test_seqs[seq].seq, "Some test sequences changed unexpectedly" def test_prepare_with_alignment_with_duplicate_sequences(self, test_file, test_seqs, existing_file, existing_aln, out_file): """Test that sequences matching the alignment are removed from the input sequences""" _, seq_outfile, _ = align.prepare([existing_file, test_file], existing_file, out_file, None, None) seq_output = SeqIO.to_dict(SeqIO.parse(seq_outfile, "fasta")) assert seq_output.keys() == test_seqs.keys(), "Did not strip duplicate sequences from test input!" def test_prepare_with_alignment_ref_sequence_wrong_length(self, test_file, existing_file, ref_seq, ref_file): """Test that including a reference sequence with a length different than the existing alignment fails.""" ref_seq.seq = ref_seq.seq[:-3] with open(ref_file, "w") as fh: SeqIO.write(ref_seq, fh, "fasta") with pytest.raises(align.AlignmentError): align.prepare([test_file,], existing_file, "out", None, ref_file) def test_postprocess_prettify_alignment(self, tmpdir, existing_aln, ref_seq): """Postprocess should strip _R_ from reverse-complemented strains and convert all sites to uppercase""" ref_seq.name = "_R_" + ref_seq.name post_align = write_strains(tmpdir, "post_align", [ref_seq] + list(existing_aln.values())) align.postprocess(post_align, None, True, False) output = SeqIO.to_dict(SeqIO.parse(post_align, "fasta")) for name, record in output.items(): assert record.seq == record.seq.upper(), "Sequence was not made uppercase" assert "_R_" not in name, "Reverse-complement prefix not removed" @pytest.mark.parametrize("keep_ref", [True, False]) def test_postprocess_remove_reference(self, existing_with_ref, ref_seq, keep_ref): """Postprocess should remove the reference strain only if requested""" align.postprocess(existing_with_ref, ref_seq.id, keep_ref, False) output = SeqIO.to_dict(SeqIO.parse(existing_with_ref, "fasta")) assert (ref_seq.id in output) == keep_ref @pytest.mark.parametrize("fill_gaps", [True, False]) def test_postprocess_fill_gaps(self, existing_file, existing_aln, ref_seq, fill_gaps): """Postprocess should make the gaps ambiguous only if requested""" align.postprocess(existing_file, None, True, fill_gaps) output = SeqIO.to_dict(SeqIO.parse(existing_file, "fasta")) for name, record in output.items(): for idx, site in enumerate(existing_aln[name].seq): if site == "-": assert (record.seq[idx] == "N") == fill_gaps def test_postprocess_strip_non_reference(self, tmpdir, ref_seq, ref_file): """Postprocess should strip gaps in the reference sequence from other sequences, but not gaps in those sequences""" expected_length = len(ref_seq.seq) - ref_seq.seq.count("-") gapped_seq = MutableSeq(str(ref_seq.seq)) gapped_seq[1] = "-" gapped = SeqRecord(gapped_seq, "GAP") gap_file = write_strains(tmpdir, "gaps", [ref_seq, gapped]) align.postprocess(gap_file, ref_seq.id, True, False) output = SeqIO.to_dict(SeqIO.parse(gap_file, "fasta")) assert "-" not in output[ref_seq.id].seq assert output["GAP"].seq.count("-") == 1 for record in output.values(): assert len(record.seq) == expected_length def test_run_no_ref_or_alignment(self, test_file, test_seqs, ref_seq, out_file, argparser, run): """No reference sequence or existing alignment. In this case, all sequences should be the length of the max sequence minus gaps""" gaps = ref_seq.seq.count("-") expected_length = max(len(seq.seq) for seq in test_seqs.values()) - gaps output = run("-s %s" % (test_file)) assert output.keys() == test_seqs.keys() assert all(len(r.seq) == expected_length for r in output.values()) def test_run_with_ref_name_no_alignment(self, test_with_ref, test_seqs, ref_seq, run): expected_length = len(ref_seq.seq) - ref_seq.seq.count("-") output = run("-s %s --reference-name %s" % (test_with_ref, ref_seq.id)) assert list(output.keys()) == [ref_seq.id,] + list(test_seqs.keys()) assert all(len(r.seq) == expected_length for r in output.values()) assert output["PREFIX"].seq.startswith("---") assert output["SUFFIX"].seq.endswith("---") def test_run_with_ref_seq_no_alignment(self, test_file, test_seqs, ref_file, ref_seq, run): expected_length = len(ref_seq.seq) - ref_seq.seq.count("-") output = run("-s %s --reference-sequence %s" % (test_file, ref_file)) assert list(output.keys()) == [ref_seq.id,] + list(test_seqs.keys()) assert all(len(r.seq) == expected_length for r in output.values()) assert output["PREFIX"].seq.startswith("---") assert output["SUFFIX"].seq.endswith("---") def test_run_with_reference_name_remove_reference(self, test_with_ref, ref_seq, run): expected_length = len(ref_seq.seq) - ref_seq.seq.count("-") output = run("-s %s --reference-name %s --remove-reference" % (test_file, ref_seq.id)) assert ref_seq.id not in output def test_run_with_reference_sequence_remove_reference(self, test_file, ref_file, ref_seq, run): expected_length = len(ref_seq.seq) - ref_seq.seq.count("-") output = run("-s %s --reference-sequence %s --remove-reference" % (test_file, ref_file)) assert ref_seq.id not in output def test_run_no_ref_with_alignment(self, test_seqs, test_file, existing_aln, existing_file, run): output = run("-s %s --existing-alignment %s" % (test_file, existing_file)) assert sorted(output.keys()) == sorted(list(test_seqs.keys()) + list(existing_aln.keys())), "Missing some sequences from input or alignment" assert len({len(r.seq) for r in output.values()}) == 1, "Not all sequences are the same length" def test_run_multiple_sequences_concatenated(self, test_file, test_seqs, ref_file, ref_seq, run): output = run("-s %s %s" % (test_file, ref_file)) assert ref_seq.id in output assert all(r in output for r in test_seqs) def test_run_with_ref_file_with_alignment_file(self, test_file, test_seqs, ref_file, ref_seq, existing_aln, existing_file, run): expected_len = len(ref_seq.seq) - ref_seq.seq.count("-") output = run("-s %s --existing-alignment %s --reference-sequence %s" % (test_file, existing_file, ref_file)) assert all(seq in output for seq in test_seqs) assert all(seq in output for seq in existing_aln) assert ref_seq.id in output assert all(len(record.seq) == expected_len for record in output.values()) @pytest.mark.parametrize("remove_ref", [True, False]) def test_run_remove_reference(self, test_file, existing_file, ref_file, ref_seq, run, remove_ref): output = run("-s %s --existing-alignment %s --reference-sequence %s%s" % ( test_file, existing_file, ref_file, " --remove-reference" if remove_ref else "")) assert (ref_seq.id not in output) == remove_ref @pytest.mark.parametrize("fill_gaps" , [True, False]) def test_run_fill_gaps(self, test_file, ref_file, run, fill_gaps): output = run("-s %s --reference-sequence %s%s" % (test_file, ref_file, " --fill-gaps" if fill_gaps else "")) expected_char = "N" if fill_gaps else "-" assert output["PREFIX"].seq.startswith(expected_char*3) assert output["SUFFIX"].seq.endswith(expected_char*3) if fill_gaps: assert all("-" not in record.seq for record in output.values()) def test_run_debug_files(self, test_file, out_file, run): run("-s %s --debug" % test_file) assert os.path.isfile(out_file + ".pre_aligner.fasta") assert os.path.isfile(out_file + ".post_aligner.fasta") def test_run_check_files_are_cleaned_up_including_alignment(self, test_file, existing_file, ref_file, run, mp_context): """Check we clean up the correct files after run is done. Note: This test is complicated because we need to test that everything is actually deleted correctly, so we need to go through the entire run cycle. This means the files all have to be prepared exactly as though they were real. So, below, we're monkeypatching "align.prepare" to catch the generated file names. We're using three tricks here: first, we're passing a dictionary to the function. Dictionaries are passed by reference (not copy), which means modifications made to the dictionary inside the function are reflected outside, with no need for return. Second, we're importing "align.prepare" again under a second name to avoid the recursion depth exceeded error. Finally, we're using a functools.partial statement to pass our dictionary to our mocked function before align.run() gets to it. All of this is not Good, but it does Work. """ out_files = {} from augur.align import prepare as prpr # Prevent recursion depth exceeded. Yes, this is terrible. def catch_filenames(out_files, *args, **kwargs): existing_aln_fname, seqs_to_align_fname, ref_name = prpr(*args, **kwargs) out_files["aln"] = existing_aln_fname out_files["seq"] = seqs_to_align_fname return existing_aln_fname, seqs_to_align_fname, ref_name mp_context.setattr(align, "prepare", functools.partial(catch_filenames, out_files)) run("-s %s --existing-alignment %s --reference-sequence %s" % (test_file, existing_file, ref_file)) assert not os.path.exists(out_files["seq"]) assert not os.path.exists(out_files["aln"]) def test_run_check_alignment_not_deleted_if_unchanged(self, test_file, existing_with_ref, ref_seq, run, mp_context): """Check we Don't clean up our original alignment by accident. See note above for this test.""" out_files = {} from augur.align import prepare as prpr # Prevent recursion depth exceeded. Yes, this is terrible. def catch_filenames(out_files, *args, **kwargs): existing_aln_fname, seqs_to_align_fname, ref_name = prpr(*args, **kwargs) out_files["aln"] = existing_aln_fname out_files["seq"] = seqs_to_align_fname return existing_aln_fname, seqs_to_align_fname, ref_name mp_context.setattr(align, "prepare", functools.partial(catch_filenames, out_files)) run("-s %s --existing-alignment %s --reference-name %s" % (test_file, existing_with_ref, ref_seq.id)) assert out_files["aln"] == existing_with_ref assert os.path.exists(out_files["aln"]), "Deleted our existing alignment file by accident" assert not os.path.exists(out_files["seq"]) augur-24.2.2/tests/test_ancestral.py000066400000000000000000000073011456376326500174750ustar00rootroot00000000000000from augur.ancestral import run_ancestral from io import StringIO from Bio import Phylo import pytest def gather_mutations_at_pos(pos, nuc_result): """pos is 1-based""" muts = [] for v in nuc_result['mutations']['nodes'].values(): for mut in v['muts']: if int(mut[1:-1])==pos: muts.append(mut) return muts def gather_bases_at_pos(pos, nuc_result): """pos is 1-based""" bases = set() for v in nuc_result['mutations']['nodes'].values(): bases.add(v['sequence'][pos-1]) return bases class TestRootNodeMutationAssignment: @pytest.fixture def tree(self): t = "(sample_C:0.02,(sample_B:0.02,sample_A:0.02)node_AB:0.06)node_root:0.02;" T = Phylo.read(StringIO(t), 'newick') return T @pytest.fixture() def ref(self): return "AAAAAA" # 123456 @pytest.fixture() def default_augur_args(self): return { 'fill_overhangs': True, # augur default 'marginal': 'joint', # augur default 'alphabet': 'nuc', # augur default } @pytest.fixture() def fasta_aln(self): from Bio.Seq import Seq from Bio.SeqRecord import SeqRecord from Bio.Align import MultipleSeqAlignment aln = MultipleSeqAlignment( [ SeqRecord(Seq("AANATA"), id="sample_A"), SeqRecord(Seq("AANATG"), id="sample_B"), SeqRecord(Seq("AANCCA"), id="sample_C"), ] ) return aln @pytest.fixture() def vcf_aln(self): def to_zero(x): return int(x)-1 return { 'sample_A': {to_zero(3): 'N', to_zero(5): 'T'}, 'sample_B': {to_zero(3): 'N', to_zero(5): 'T', to_zero(6): 'G'}, 'sample_C': {to_zero(3): 'N', to_zero(4): 'C', to_zero(5): 'C'} } def test_fasta_with_ambiguity_inferred(self, tree, fasta_aln, ref, default_augur_args): is_vcf = False nuc_result = run_ancestral(T=tree, aln=fasta_aln, reference_sequence=ref, is_vcf=is_vcf, full_sequences=not is_vcf, infer_ambiguous=True, **default_augur_args) assert(nuc_result['root_seq'] == ref) assert(gather_bases_at_pos(3, nuc_result)==set(['A'])) assert(gather_mutations_at_pos(3, nuc_result)==[]) def test_fasta_with_ambiguity_not_inferred(self, tree, fasta_aln, ref, default_augur_args): is_vcf = False nuc_result = run_ancestral(T=tree, aln=fasta_aln, reference_sequence=ref, is_vcf=is_vcf, full_sequences=not is_vcf, infer_ambiguous=False, **default_augur_args) assert(nuc_result['root_seq'] == ref) assert(gather_bases_at_pos(3, nuc_result)==set(['N'])) # Expected behaviour here is that every tip is "N", and this is also # inferred over all the internal nodes (so they're all "N") and thus we have # a single mutation "C3N" on the root node. This is not what happens - the # full sequences on each node are like this, but the reported mutations are # incorrect - we are describing a "C3N" on each terminal node. I'm removing # this test now as (a) it's not newly introduced and (b) I don't have the # time to fix it right now. # Note that the vcf version of this has the same bug. # assert(gather_mutations_at_pos(3, nuc_result)==['A3N']) def test_vcf_with_ambiguity_inferred(self, tree, vcf_aln, ref, default_augur_args): is_vcf = True nuc_result = run_ancestral(T=tree, aln=vcf_aln, reference_sequence=ref, is_vcf=is_vcf, full_sequences=not is_vcf, infer_ambiguous=True, **default_augur_args) assert(nuc_result['root_seq'] == ref) assert(gather_mutations_at_pos(3, nuc_result)==[]) augur-24.2.2/tests/test_clades.py000066400000000000000000000045621456376326500167620ustar00rootroot00000000000000#!/usr/bin/env python3 import pytest from augur.clades import read_in_clade_definitions def test_read_in_clade_definitions_simple(): clades = read_in_clade_definitions("tests/data/clades/simple_clades.tsv") assert clades == { 'Clade_1': [('ctpE', 80, 'D')], 'Clade_2': [('nuc', 30641, 'T')], 'Clade_3': [('nuc', 444295, 'A'), ('pks8', 633, 'T')] } def test_read_in_clade_definitions_with_empty_lines(): clades = read_in_clade_definitions("tests/data/clades/empty_lines_clades.tsv") assert clades == { 'Clade_1': [('ctpE', 80, 'D')], 'Clade_2': [('nuc', 30641, 'T')], 'Clade_3': [('nuc', 444295, 'A'), ('pks8', 633, 'T')] } def test_read_in_clade_definitions_with_comments(): clades = read_in_clade_definitions("tests/data/clades/commented_clades.tsv") assert clades == { 'Clade_1': [('ctpE', 80, 'D')], 'Clade_2': [('nuc', 30641, 'T')], 'Clade_3': [('nuc', 444295, 'A'), ('pks8', 633, 'T')] } def test_read_in_clade_definitions_inherit_simple(): clades = read_in_clade_definitions("tests/data/clades/inherit_clades.tsv") assert clades == { 'Clade_1': [('ctpE', 80, 'D')], 'Clade_2': [('nuc', 30641, 'T')], 'Clade_3': [('nuc', 30641, 'T'), ('pks8', 633, 'T')] } def test_read_in_clade_definitions_inherit_chained(): clades = read_in_clade_definitions("tests/data/clades/inherit_chained_clades.tsv") assert clades == { 'Clade_1': [('ctpE', 80, 'D')], 'Clade_2': [('ctpE', 80, 'D'),('nuc', 30641, 'T')], 'Clade_3': [('ctpE', 80, 'D'),('nuc', 30641, 'T'), ('pks8', 633, 'T')] } def test_read_in_clade_definitions_inherit_cycle_error(): with pytest.raises(ValueError): read_in_clade_definitions("tests/data/clades/inherit_cycle_clades.tsv") def test_read_in_clade_definitions_multiple_inheritance_error(): with pytest.raises(ValueError): read_in_clade_definitions("tests/data/clades/multiple_inheritance_clades.tsv") def test_read_in_clade_definitions_inheritance_from_nonexistent_clade_error(): with pytest.raises(ValueError): read_in_clade_definitions("tests/data/clades/nonexistent_clade_inheritance_clades.tsv") def test_read_in_clade_definitions_inheritance_from_self_error(): with pytest.raises(ValueError): read_in_clade_definitions("tests/data/clades/self_inherit_clades.tsv") augur-24.2.2/tests/test_flake8.py000066400000000000000000000004521456376326500166730ustar00rootroot00000000000000from pathlib import Path from subprocess import run topdir = Path(__file__).resolve().parent.parent def test_flake8(): # Check the exit status ourselves for nicer test output on failure result = run(["flake8"], cwd = topdir) assert result.returncode == 0, "flake8 exited with errors" augur-24.2.2/tests/test_frequencies.py000066400000000000000000000500461456376326500200360ustar00rootroot00000000000000""" Unit tests for frequency estimation """ import Bio import json import numpy as np from pathlib import Path import pytest import sys # we assume (and assert) that this script is running from the tests/ directory sys.path.append(str(Path(__file__).parent.parent.parent)) from augur.dates import numeric_date from augur.frequency_estimators import float_to_datestring, get_pivots, TreeKdeFrequencies, AlignmentKdeFrequencies, TreeKdeFrequenciesError from augur.utils import json_to_tree # Define regions to use for testing weighted frequencies. REGIONS = [ ('africa', 1.02), ('europe', 0.74), ('north_america', 0.54), ('china', 1.36), ('south_asia', 1.45), ('japan_korea', 0.2), ('oceania', 0.04), ('south_america', 0.41), ('southeast_asia', 0.62), ('west_asia', 0.75) ] @pytest.fixture def alignment(): """Returns a multiple sequence alignment containing a small test set of H3N2 sequences. """ msa = Bio.AlignIO.read("tests/data/aa-seq_h3n2_ha_2y_HA1.fasta", "fasta") return msa @pytest.fixture def tree(): """Returns an annotated Bio.Phylo tree. """ with open("tests/data/flu_seasonal_h3n2_ha_3y_tree.json") as fh: json_tree = json.load(fh) tree = json_to_tree(json_tree) return tree # # Test pivot calculations # def test_get_pivots_from_tree_only(tree): """Test pivot calculations. """ # Define pivot frequency in months. pivot_frequency = 3 observations = [tip.attr["num_date"] for tip in tree.get_terminals()] pivots = get_pivots(observations, pivot_frequency) assert isinstance(pivots, np.ndarray) # Floating point pivot values should be roughly separated by the given # number of months divided by number of months in a year. Numeric dates from # pivots calculate decimal fractions as the proportion of days in the year, # instead of months in the year (e.g., the fraction for the first three # months of a non-leap year is (31 + 28 + 31) / 365 or 0.246575 instead of 3 # / 12 or 0.25). As a result of this difference in how we calculate # fractions, we need to round to pivots to 2 decimal places which is the # precision of month-based fractions. assert np.round(pivots[1] - pivots[0], 2) == (pivot_frequency / 12.0) def test_get_pivots_from_start_and_end_date(): """ Test pivot calculation from a given start and end date instead of a given tree First pivot is the first day of the month immediately following start_date Last pivot is the first day of the month immediately preceding end_date Current logic converts numeric date 2015.5 to 2015-07-02, hence using 2015.49 """ pivot_frequency = 1 start_date = 2015.49 end_date = 2018.5 observations = [] pivots = get_pivots(observations, pivot_frequency, start_date=start_date, end_date=end_date) assert isinstance(pivots, np.ndarray) assert np.round( 12 * (pivots[1] - pivots[0]) ) == pivot_frequency assert pivots[0] == 2015.5 assert pivots[-1] == 2018.5 assert pivots[-1] >= end_date - pivot_frequency def test_get_pivots_by_months(): """Get pivots where intervals are defined by months. """ pivots = get_pivots(observations=[], pivot_interval=1, start_date=2015.0, end_date=2016.0, pivot_interval_units="months") # Pivots should include all 12 months of the year plus the month represented # by the end date because pivots represent time slices through data and we # want to evaluate frequencies at the start and end time slices. assert len(pivots) == 13 assert float_to_datestring(pivots[-1]) == "2016-01-01" def test_get_pivots_by_months_with_realistic_start_end_dates(): """Get pivots where intervals are defined by months and realistic start and end dates. """ # 6 years (72 months) of pivots with 3-month intervals should produce 24 + 1 # pivots (4 pivots per year plus the pivot for the beginning of the year # associated with the end date). pivots = get_pivots( observations=[], pivot_interval=3, start_date=numeric_date("2017-01-06"), end_date=numeric_date("2023-01-06"), pivot_interval_units="months" ) assert len(pivots) == 25 assert float_to_datestring(pivots[-1]) == "2023-01-06" def test_get_pivots_by_weeks(): """Get pivots where intervals are defined as weeks instead of months. """ # As with monthly pivots, weekly pivots should include the first and last # values in the range. So, a 1-year interval will represent 52 weekly pivots # from the beginning plus the first pivot from the next year. pivots = get_pivots(observations=[], pivot_interval=1, start_date=2015.0, end_date=2016.0, pivot_interval_units="weeks") assert len(pivots) == 53 pivots = get_pivots( observations=[], pivot_interval=1, start_date=numeric_date("2022-01-06"), end_date=numeric_date("2023-01-06"), pivot_interval_units="weeks" ) assert len(pivots) == 53 def test_get_pivots_by_invalid_unit(): with pytest.raises(ValueError, match=r".*invalid_unit.*is not supported.*"): pivots = get_pivots(observations=[], pivot_interval=1, start_date=2015.0, end_date=2016.0, pivot_interval_units="invalid_unit") @pytest.mark.parametrize( "start, end, expected_pivots", [ ( "2022-01-01", "2022-04-01", ("2022-01-01", "2022-02-01", "2022-03-01", "2022-04-01") ), ( "2022-01-31", "2022-03-31", ("2022-01-31", "2022-02-28", "2022-03-31") ), # Note that Jan 31 to Apr 30 gives the same amount of pivot points as # Jan 31 to Mar 31. ( "2022-01-31", "2022-04-30", ("2022-02-28", "2022-03-30", "2022-04-30") ), # However, in practice, the interval is more likely to be Jan 30 to Apr # 30 as long as the start date is calculated relative to the end date # (i.e. start date = 3 months before Apr 30 = Jan 30). # That interval includes an additional pivot point as expected. ( "2022-01-30", "2022-04-30", ("2022-01-30", "2022-02-28", "2022-03-30", "2022-04-30") ), ] ) def test_get_pivots_on_month_boundaries(start, end, expected_pivots): """Get pivots where the start/end dates are on month boundaries. """ pivots = get_pivots( observations=[], pivot_interval=1, start_date=numeric_date(start), end_date=numeric_date(end), pivot_interval_units="months" ) assert len(pivots) == len(expected_pivots) assert np.allclose(pivots, [numeric_date(date) for date in expected_pivots], rtol=0, atol=1e-4) # # Test KDE frequency estimation for trees # class TestTreeKdeFrequencies(object): """Tests KDE-based frequency estimation methods for trees """ def test_estimate(self, tree): """Test frequency estimation with default parameters. """ kde_frequencies = TreeKdeFrequencies() frequencies = kde_frequencies.estimate(tree) assert hasattr(kde_frequencies, "pivots") assert np.around(kde_frequencies.pivots[1] - kde_frequencies.pivots[0], 2) == np.around(1 / 12.0, 2) assert hasattr(kde_frequencies, "frequencies") assert list(frequencies.values())[0].shape == kde_frequencies.pivots.shape # Frequencies should sum to 1 at all pivots. assert np.allclose(np.array(list(frequencies.values())).sum(axis=0), np.ones_like(kde_frequencies.pivots)) def test_estimate_with_time_interval(self, tree): """Test frequency estimation with a given time interval. """ start_date = 2015.5 end_date = 2018.5 kde_frequencies = TreeKdeFrequencies( start_date=start_date, end_date=end_date ) frequencies = kde_frequencies.estimate(tree) assert hasattr(kde_frequencies, "pivots") assert kde_frequencies.pivots[0] == 2015.5 assert hasattr(kde_frequencies, "frequencies") assert list(frequencies.values())[0].shape == kde_frequencies.pivots.shape def test_weighted_estimate(self, tree): """Test frequency estimation with weighted tips. """ # Estimate weighted frequencies. weights = {region[0]: region[1] for region in REGIONS} kde_frequencies = TreeKdeFrequencies( weights=weights, weights_attribute="region" ) frequencies = kde_frequencies.estimate(tree) assert hasattr(kde_frequencies, "pivots") assert hasattr(kde_frequencies, "frequencies") assert list(frequencies.values())[0].shape == kde_frequencies.pivots.shape # Frequencies should sum to 1 at all pivots. assert np.allclose(np.array(list(frequencies.values())).sum(axis=0), np.ones_like(kde_frequencies.pivots)) # Estimate unweighted frequencies to compare with weighted frequencies. unweighted_kde_frequencies = TreeKdeFrequencies() unweighted_frequencies = unweighted_kde_frequencies.estimate(tree) # Any non-root node of the tree should have different frequencies with # or without weighting. clade_to_test = tree.root.clades[0] assert not np.array_equal( frequencies[clade_to_test.name], unweighted_frequencies[clade_to_test.name] ) def test_weighted_estimate_with_unrepresented_weights(self, tree): """Test frequency estimation with weighted tips when any of the weight attributes is unrepresented. In this case, normalization of frequencies to the proportions represented by the weights should be followed by a second normalization to sum to 1. """ # Drop all tips sampled from Africa from the tree. Despite dropping a # populous region, the estimated frequencies should still sum to 1 # below. tips_from_africa = [ tip for tip in tree.find_clades(terminal=True) if tip.attr["region"] == "africa" ] for tip in tips_from_africa: tree.prune(tip) # Estimate weighted frequencies. weights = {region[0]: region[1] for region in REGIONS} kde_frequencies = TreeKdeFrequencies( weights=weights, weights_attribute="region" ) frequencies = kde_frequencies.estimate(tree) # Frequencies should sum to 1 at all pivots. assert np.allclose(np.array(list(frequencies.values())).sum(axis=0), np.ones_like(kde_frequencies.pivots)) # Estimate weighted frequencies such that all weighted attributes are # missing. This should raise an exception because none of the tips will # match any of the weights and the weighting of frequencies will be # impossible. weights = {"fake_region_1": 1.0, "fake_region_2": 2.0} kde_frequencies = TreeKdeFrequencies( weights=weights, weights_attribute="region" ) with pytest.raises(TreeKdeFrequenciesError): frequencies = kde_frequencies.estimate(tree) def test_only_tip_estimates(self, tree): """Test frequency estimation for only tips in a given tree. """ # Estimate unweighted frequencies. kde_frequencies = TreeKdeFrequencies( include_internal_nodes=False ) frequencies = kde_frequencies.estimate(tree) # Verify that all tips have frequency estimates and none of the internal nodes do. assert all([tip.name in frequencies for tip in tree.get_terminals()]) assert not any([node.clade in frequencies for node in tree.get_nonterminals()]) # Estimate weighted frequencies. weights = {region[0]: region[1] for region in REGIONS} kde_frequencies = TreeKdeFrequencies( weights=weights, weights_attribute="region", include_internal_nodes=False ) frequencies = kde_frequencies.estimate(tree) # Verify that all tips have frequency estimates and none of the internal nodes do. assert all([tip.name in frequencies for tip in tree.get_terminals()]) assert not any([node.clade in frequencies for node in tree.get_nonterminals()]) def test_tip_and_internal_node_estimates(self, tree): """Test frequency estimation for tips and internal nodes in a given tree. """ # Estimate unweighted frequencies. kde_frequencies = TreeKdeFrequencies( include_internal_nodes=True ) frequencies = kde_frequencies.estimate(tree) # Verify that all tips and internal nodes have frequency estimates. assert all([tip.name in frequencies for tip in tree.find_clades()]) def test_censored_frequencies(self, tree): """Test estimation of frequencies where tips sampled beyond a given date are censored from the calculations. """ max_date = 2017.0 kde_frequencies = TreeKdeFrequencies( max_date=max_date ) frequencies = kde_frequencies.estimate(tree) # Confirm that tips sampled after the max date have zero frequencies. assert all([frequencies[tip.name].sum() == 0 for tip in tree.get_terminals() if tip.attr["num_date"] > max_date]) # Confirm that one or more tips sampled before the max date have nonzero frequencies. assert any([frequencies[tip.name].sum() > 0 for tip in tree.get_terminals() if tip.attr["num_date"] <= max_date]) def test_node_filter(self, tree): """Test frequency estimation with specific nodes omitted by setting their frequencies to zero at all pivots. """ # Filter nodes by region. regions = ["china"] kde_frequencies = TreeKdeFrequencies( node_filters={"region": regions} ) frequencies = kde_frequencies.estimate(tree) # Verify that all tips have frequency estimates regardless of node # filter. assert all([tip.name in frequencies for tip in tree.get_terminals()]) # Verify that all tips from the requested region have non-zero frequencies. assert all([frequencies[tip.name].sum() > 0 for tip in tree.get_terminals() if tip.attr["region"] in regions]) # Verify that all tips not from the requested region have zero frequencies. assert all([frequencies[tip.name].sum() == 0 for tip in tree.get_terminals() if tip.attr["region"] not in regions]) def test_export_with_frequencies(self, tree): """Test frequencies export to JSON when frequencies have been estimated. """ kde_frequencies = TreeKdeFrequencies() frequencies = kde_frequencies.estimate(tree) frequencies_json = kde_frequencies.to_json() assert "params" in frequencies_json assert kde_frequencies.pivot_frequency == frequencies_json["params"]["pivot_frequency"] assert kde_frequencies.start_date == frequencies_json["params"]["start_date"] assert kde_frequencies.end_date == frequencies_json["params"]["end_date"] assert "data" in frequencies_json assert "pivots" in frequencies_json["data"] assert "frequencies" in frequencies_json["data"] def test_export_without_frequencies(self): """Test frequencies export to JSON when frequencies have *not* been estimated. """ kde_frequencies = TreeKdeFrequencies() frequencies_json = kde_frequencies.to_json() assert "params" in frequencies_json assert kde_frequencies.pivot_frequency == frequencies_json["params"]["pivot_frequency"] assert "node_filters" in frequencies_json["params"] assert "data" not in frequencies_json def test_import(self, tree, tmpdir): """Test import of frequencies JSON that was exported from a frequencies instance. """ start_date = 2015.5 end_date = 2018.5 kde_frequencies = TreeKdeFrequencies( start_date=start_date, end_date=end_date ) frequencies = kde_frequencies.estimate(tree) frequencies_json = kde_frequencies.to_json() # Try to dump exported JSON to disk. tmp_fh = tmpdir.mkdir("json").join("frequencies.json") fh = tmp_fh.open(mode="w") json.dump(frequencies_json, fh) fh.close() assert tmp_fh.check() # Import frequencies from existing tree and JSON. fh = tmp_fh.open() new_frequencies_json = json.load(fh) fh.close() new_kde_frequencies = TreeKdeFrequencies.from_json(new_frequencies_json) assert np.array_equal( kde_frequencies.pivots, new_kde_frequencies.pivots ) # Get the first non-root key (root clade is number 0) and should be first in the sorted list of keys. key = sorted(kde_frequencies.frequencies.keys())[1] assert np.array_equal( kde_frequencies.frequencies[key], new_kde_frequencies.frequencies[key] ) def test_import_without_frequencies(self): """Test import of frequencies JSON that was exported from a frequencies instance without frequency values. """ kde_frequencies = TreeKdeFrequencies() frequencies_json = kde_frequencies.to_json() # Import frequencies from existing tree and JSON. new_kde_frequencies = TreeKdeFrequencies.from_json(frequencies_json) assert kde_frequencies.pivot_frequency == new_kde_frequencies.pivot_frequency assert not hasattr(new_kde_frequencies, "frequencies") def test_get_params(self, tree): """Test export of parameters used to create an instance. """ initial_params = { "max_date": 2017.0, "start_date": 2015.5, "end_date": 2018.5 } kde_frequencies = TreeKdeFrequencies(**initial_params) frequencies = kde_frequencies.estimate(tree) # Confirm that the exported parameters match the input. params = kde_frequencies.get_params() for param in initial_params: assert params[param] == initial_params[param] # # Test KDE frequency estimation for multiple sequence alignments # class TestAlignmentKdeFrequencies(object): """Tests KDE-based frequency estimation methods for multiple sequence alignments """ def test_estimate(self, alignment): # Generate random dates for each sequence in the alignment. np.random.seed(1) observations = np.random.choice([2010.0, 2011.0], size=len(alignment)) + np.random.random(len(alignment)) # Estimate frequencies for the alignment. kde_frequencies = AlignmentKdeFrequencies() frequencies = kde_frequencies.estimate(alignment, observations) assert hasattr(kde_frequencies, "pivots") pivots = kde_frequencies.pivots # Pivot decimal fractions represent fractions of a year by days, so # comparisons with fractions of a year by months need to take into # account rounding error between these calculations. In this test, we # allow pivots to be spaced apart by a value that is "close" to 1 / 12 # months by the rounding error of the month-based precision. assert np.isclose((pivots[-1] - pivots[-2]), 1 / 12.0, atol=0.005) assert hasattr(kde_frequencies, "frequencies") assert list(frequencies.values())[0].shape == pivots.shape # Find a position with frequencies estimated for multiple bases. position = list(frequencies.keys())[0].split(":")[0] position_frequencies = np.zeros_like(kde_frequencies.pivots) expected_position_frequencies = np.ones_like(kde_frequencies.pivots) for key in frequencies: if key.startswith("%s:" % position): position_frequencies += frequencies[key] # Confirm that the frequencies at this position sum to 1 at all timepoints. assert np.allclose(position_frequencies, expected_position_frequencies) augur-24.2.2/tests/test_mask.py000066400000000000000000000464501456376326500164640ustar00rootroot00000000000000"""Tests for augur mask NOTE: Several functions are monkeypatched in these tests. If you change the arguments for any function in mask.py, check that it is correctly updated in this file. """ import argparse import os import pytest import string from Bio import SeqIO from Bio.Seq import Seq from Bio.SeqRecord import SeqRecord from augur import mask from augur.utils import VALID_NUCLEOTIDES # Test inputs for the commands. Writing these here so tests are self-contained. @pytest.fixture def sequences(): return { "SEQ1": SeqRecord(Seq("ATGC-ATGC-ATGC"), id="SEQ1"), "SEQ2": SeqRecord(Seq("ATATATATATATATAT"), id="SEQ2"), "SEQ_ALLCHARS": SeqRecord(Seq(string.ascii_letters + string.digits + "-"), id="SEQ_ALLCHARS") } @pytest.fixture def fasta_file(tmpdir, sequences): fasta_file = str(tmpdir / "test.fasta") with open(fasta_file, "w") as fh: SeqIO.write(sequences.values(), fh, "fasta") return fasta_file TEST_VCF="""\ ##fileformat=VCFv4.2 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SEQ 1 . G A . . SEQ 2 . G A . . SEQ 3 . C T . . SEQ 5 . C T . . SEQ 8 . A C . . SEQ 13 . A C . . """ @pytest.fixture def vcf_file(tmpdir): vcf_file = str(tmpdir / "test.vcf") with open(vcf_file, "w") as fh: fh.write(TEST_VCF) return vcf_file TEST_BED_SEQUENCE = [1,4,6,7,8,9] # IF YOU UPDATE ONE OF THESE, UPDATE THE OTHER. TEST_BED="""\ SEQ1 1 2 IG18_Rv0018c-Rv0019c SEQ1 4 5 IG18_Rv0018c-Rv0019c SEQ1 6 8 IG18_Rv0018c-Rv0019c SEQ1 7 10 IG18_Rv0018c-Rv0019c """ @pytest.fixture def bed_file(tmpdir): bed_file = str(tmpdir / "exclude.bed") with open(bed_file, "w") as fh: fh.write(TEST_BED) return bed_file TEST_MASK_SEQUENCE = [3,5,7] TEST_MASK="""\ 4 6 8 """ @pytest.fixture def mask_file(tmpdir): mask_file = str(tmpdir / "exclude.mask") with open(mask_file, "w") as fh: fh.write(TEST_MASK) return mask_file @pytest.fixture def out_file(tmpdir): out_file = str(tmpdir / "out") open(out_file, "w").close() return out_file @pytest.fixture def mp_context(monkeypatch): #Have found explicit monkeypatch context-ing prevents stupid bugs with monkeypatch.context() as mp: yield mp @pytest.fixture def argparser(): """Provide an easy way to test command line arguments""" parser = argparse.ArgumentParser() mask.register_arguments(parser) def parse(args): return parser.parse_args(args.split(" ")) return parse class TestMask: def test_get_chrom_name_valid(self, vcf_file): """get_chrom_name should return the first CHROM field in a vcf file""" assert mask.get_chrom_name(vcf_file) == "SEQ" def test_get_chrom_name_invalid(self, tmpdir): """get_chrom_name should return nothing if no CHROM field is found in the VCF""" vcf_file = str(tmpdir / "incomplete.vcf") with open(vcf_file, "w") as fh: fh.write("##fileformat=VCFv4.2\n") fh.write("#CHROM POS ID REF ALT QUAL FILTER INFO\n") assert mask.get_chrom_name(vcf_file) is None def test_mask_vcf_bails_on_no_chrom(self, tmpdir): """mask_vcf should pull a sys.exit() if get_chrom_name returns None""" bad_vcf = str(tmpdir / "bad.vcf") with open(bad_vcf, "w") as fh: fh.write("#") with pytest.raises(SystemExit) as err: mask.mask_vcf([], bad_vcf, "") def test_mask_vcf_creates_maskfile(self, vcf_file, mp_context): """mask_vcf should create a 1-indexed mask file from the 0-indexed list of sites""" mask_file = vcf_file + "_maskTemp" def shell_has_maskfile(call, **kwargs): assert mask_file in call mp_context.setattr(mask, "get_chrom_name", lambda f: "SEQ") mp_context.setattr(mask, "run_shell_command", shell_has_maskfile) mask.mask_vcf([1,5], vcf_file, vcf_file, cleanup=False) assert os.path.isfile(mask_file), "Mask file was not written!" with open(mask_file) as fh: assert fh.read() == "SEQ 2\nSEQ 6", "Incorrect mask file written!" def test_mask_vcf_handles_gz(self, vcf_file, mp_context): """mask_vcf should recognize when the in or out files are .gz and call out accordingly""" def test_shell(call, raise_errors=True): assert "--gzvcf" in call assert "| gzip -c" in call mp_context.setattr(mask, "run_shell_command", test_shell) mp_context.setattr(mask, "get_chrom_name", lambda f: "SEQ") # Still worth using the fixture here because writing the mask file uses this path # Using it for both entries in case god forbid someone starts assuming that path # valid earlier than it currently is. in_file = vcf_file + ".gz" mask.mask_vcf([1,5], in_file, in_file) def test_mask_vcf_removes_matching_sites(self, vcf_file, out_file): """mask_vcf should remove the given sites from the VCF file""" mask.mask_vcf([4,5], vcf_file, out_file) with open(out_file) as after, open(vcf_file) as before: assert len(after.readlines()) == len(before.readlines()) - 1, "Too many lines removed!" assert "SEQ\t5" not in after.read(), "Correct sites not removed!" def test_mask_vcf_cleanup_flag(self, vcf_file, mp_context): """mask_vcf should respect the cleanup flag""" tmp_mask_file = vcf_file + "_maskTemp" mp_context.setattr(mask, "run_shell_command", lambda *a, **k: None) mp_context.setattr(mask, "get_chrom_name", lambda f: "SEQ") mask.mask_vcf([], vcf_file, "", cleanup=True) assert not os.path.isfile(tmp_mask_file), "Temporary mask not cleaned up" mask.mask_vcf([], vcf_file, "", cleanup=False) assert os.path.isfile(tmp_mask_file), "Temporary mask cleaned up as expected" def test_mask_fasta_normal_case(self, fasta_file, out_file, sequences): """mask_fasta normal case - all sites in sequences""" mask_sites = [5,10] mask.mask_fasta([5,10], fasta_file, out_file) output = SeqIO.parse(out_file, "fasta") for seq in output: original = sequences[seq.id] for idx, site in enumerate(seq): if idx not in mask_sites: assert site == original[idx], "Incorrect sites modified!" else: assert site == "N", "Not all sites modified correctly!" def test_mask_fasta_out_of_index(self, out_file, fasta_file, sequences): """mask_fasta provided a list of indexes past the length of the sequences""" max_length = max(len(record.seq) for record in sequences.values()) mask.mask_fasta([5, max_length, max_length+5], fasta_file, out_file) output = SeqIO.parse(out_file, "fasta") for seq in output: assert seq[5] == "N", "Not all sites masked correctly!" original = sequences[seq.id] for idx, site in enumerate(seq): if idx != 5: assert site == original[idx], "Incorrect sites modified!" def test_mask_fasta_from_beginning(self, out_file, fasta_file, sequences): mask.mask_fasta([], fasta_file, out_file, mask_from_beginning=3) output = SeqIO.parse(out_file, "fasta") for seq in output: original = sequences[seq.id] assert seq.seq[:3] == "NNN" assert seq.seq[3:] == original.seq[3:] def test_mask_fasta_from_end(self, out_file, fasta_file, sequences): mask.mask_fasta([], fasta_file, out_file, mask_from_end=3) output = SeqIO.parse(out_file, "fasta") for seq in output: original = sequences[seq.id] assert seq.seq[-3:] == "NNN" assert seq.seq[:-3] == original.seq[:-3] def test_mask_fasta_from_beginning_and_end(self, out_file, fasta_file, sequences): mask.mask_fasta([], fasta_file, out_file, mask_from_beginning=2, mask_from_end=3) output = SeqIO.parse(out_file, "fasta") for seq in output: original = sequences[seq.id] assert seq.seq[:2] == "NN" assert seq.seq[-3:] == "NNN" assert seq.seq[2:-3] == original.seq[2:-3] @pytest.mark.parametrize("beginning,end", ((1000,0), (0,1000),(1000,1000))) def test_mask_fasta_from_beginning_and_end_too_long(self, fasta_file, out_file, beginning, end): mask.mask_fasta([], fasta_file, out_file, mask_from_beginning=beginning, mask_from_end=end) output = SeqIO.parse(out_file, "fasta") for record in output: assert record.seq == "N" * len(record.seq) @pytest.mark.parametrize("mask_invalid", (True, False)) def test_mask_fasta_invalid_sites(self, fasta_file, out_file, sequences, mask_invalid): """Verify that mask_fasta masks invalid nucleotides when and only when mask_invalid is passed as True""" mask.mask_fasta([], fasta_file, out_file, mask_invalid=mask_invalid) output = SeqIO.to_dict(SeqIO.parse(out_file, "fasta")) for name, record in sequences.items(): for site, nucleotide in enumerate(record.seq): if nucleotide not in VALID_NUCLEOTIDES and mask_invalid is True: assert output[name][site] == "N" else: assert output[name][site] == nucleotide def test_run_handle_missing_sequence_file(self, vcf_file, argparser): os.remove(vcf_file) args = argparser("-s %s" % vcf_file) with pytest.raises(SystemExit): mask.run(args) def test_run_handle_empty_sequence_file(self, vcf_file, argparser): open(vcf_file,"w").close() args = argparser("-s %s --mask-sites 1" % vcf_file) with pytest.raises(SystemExit): mask.run(args) def test_run_handle_missing_mask_file(self, vcf_file, bed_file, argparser): os.remove(bed_file) args = argparser("-s %s --mask %s" % (vcf_file, bed_file)) with pytest.raises(SystemExit): mask.run(args) def test_run_handle_empty_mask_file(self, vcf_file, bed_file, argparser): open(bed_file, "w").close() args = argparser("-s %s --mask %s" % (vcf_file, bed_file)) with pytest.raises(SystemExit): mask.run(args) def test_run_recognize_vcf(self, bed_file, vcf_file, argparser, mp_context): """Ensure we're handling vcf files correctly""" args = argparser("--mask=%s -s %s --no-cleanup" % (bed_file, vcf_file)) def fail(*args, **kwargs): assert False, "Called mask_fasta incorrectly" mp_context.setattr(mask, "mask_vcf", lambda *a, **k: None) mp_context.setattr(mask, "mask_fasta", fail) mp_context.setattr(mask, "copyfile", lambda *args: None) mask.run(args) def test_run_recognize_fasta(self, bed_file, fasta_file, argparser, mp_context): """Ensure we're handling fasta files correctly""" args = argparser("--mask=%s -s %s --no-cleanup" % (bed_file, fasta_file)) def fail(*args, **kwargs): assert False, "Called mask_fasta incorrectly" mp_context.setattr(mask, "mask_fasta", lambda *a, **k: None) mp_context.setattr(mask, "mask_vcf", fail) mp_context.setattr(mask, "copyfile", lambda *args: None) mask.run(args) def test_run_handle_missing_outfile(self, bed_file, fasta_file, argparser, mp_context): args = argparser("--mask=%s -s %s" % (bed_file, fasta_file)) expected_outfile = os.path.join(os.path.dirname(fasta_file), "masked_" + os.path.basename(fasta_file)) def check_outfile(mask_sites, in_file, out_file, **kwargs): assert out_file == expected_outfile with open(out_file, "w") as fh: fh.write("test_string") mp_context.setattr(mask, "mask_fasta", check_outfile) mask.run(args) with open(fasta_file) as fh: assert fh.read() == "test_string" def test_run_respect_no_cleanup(self, bed_file, vcf_file, argparser, mp_context): out_file = os.path.join(os.path.dirname(vcf_file), "masked_" + os.path.basename(vcf_file)) def make_outfile(mask_sites, in_file, out_file, cleanup=True): assert cleanup == False open(out_file, "w").close() # need out_file to exist mp_context.setattr(mask, "mask_vcf", make_outfile) args = argparser("--mask=%s -s %s -o %s --no-cleanup" % (bed_file, vcf_file, out_file)) mask.run(args) assert os.path.exists(out_file), "Output file incorrectly deleted" def test_run_normal_case(self, bed_file, vcf_file, out_file, argparser, mp_context): def check_args(mask_sites, in_file, _out_file, cleanup): assert mask_sites == TEST_BED_SEQUENCE, "Wrong mask sites provided" assert in_file == vcf_file, "Incorrect input file provided" assert _out_file == out_file, "Incorrect output file provided" assert cleanup is True, "Cleanup erroneously passed in as False" mp_context.setattr(mask, "mask_vcf", check_args) args = argparser("--mask=%s --sequences=%s --output=%s" %(bed_file, vcf_file, out_file)) mask.run(args) assert os.path.exists(out_file), "Output file incorrectly deleted" def test_run_with_mask_sites(self, vcf_file, out_file, argparser, mp_context): args = argparser("--mask-sites 2 8 -s %s -o %s" % (vcf_file, out_file)) def check_mask_sites(mask_sites, *args, **kwargs): # mask-sites are passed to the CLI as one-indexed assert mask_sites == [1,7] mp_context.setattr(mask, "mask_vcf", check_mask_sites) mask.run(args) def test_run_with_mask_sites_and_mask_file(self, vcf_file, out_file, bed_file, argparser, mp_context): args = argparser("--mask-sites 20 21 --mask %s -s %s -o %s" % (bed_file, vcf_file, out_file)) def check_mask_sites(mask_sites, *args, **kwargs): # mask-sites are passed to the CLI as one-indexed assert mask_sites == sorted(set(TEST_BED_SEQUENCE + [19,20])) mp_context.setattr(mask, "mask_vcf", check_mask_sites) mask.run(args) def test_run_requires_some_masking(self, vcf_file, argparser): args = argparser("-s %s" % vcf_file) with pytest.raises(SystemExit) as err: mask.run(args) @pytest.mark.parametrize("op", ("beginning", "end")) def test_run_vcf_cannot_mask_beginning_or_end(self, vcf_file, argparser, op): args = argparser("-s %s --mask-from-%s 2" % (vcf_file, op)) with pytest.raises(SystemExit) as err: mask.run(args) def test_run_fasta_mask_from_beginning_or_end(self, fasta_file, out_file, argparser, mp_context): args = argparser("-s %s -o %s --mask-from-beginning 2 --mask-from-end 3" % (fasta_file, out_file)) def check_mask_from(*args, mask_from_beginning=0, mask_from_end=0, **kwargs): assert mask_from_beginning == 2 assert mask_from_end == 3 mp_context.setattr(mask, "mask_fasta", check_mask_from) mask.run(args) def test_e2e_fasta_minimal(self, fasta_file, bed_file, sequences, argparser): args = argparser("-s %s --mask %s" % (fasta_file, bed_file)) mask.run(args) output = SeqIO.parse(fasta_file,"fasta") for record in output: reference = sequences[record.id].seq for idx, site in enumerate(record.seq): if idx in TEST_BED_SEQUENCE: assert site == "N" else: assert site == reference[idx] def test_e2e_fasta_mask_file(self, fasta_file, mask_file, sequences, argparser): args = argparser("-s %s --mask %s" % (fasta_file, mask_file)) mask.run(args) output = SeqIO.parse(fasta_file,"fasta") for record in output: reference = sequences[record.id].seq for idx, site in enumerate(record.seq): if idx in TEST_MASK_SEQUENCE: assert site == "N" else: assert site == reference[idx] def test_e2e_fasta_beginning_end_sites(self, fasta_file, bed_file, out_file, sequences, argparser): from_beginning = 3 from_end = 1 arg_sites = [5, 12] expected_removals = sorted(set(TEST_BED_SEQUENCE + [s - 1 for s in arg_sites])) print(expected_removals) args = argparser("-s %s -o %s --mask %s --mask-from-beginning %s --mask-from-end %s --mask-sites %s" % ( fasta_file, out_file, bed_file, from_beginning, from_end, " ".join(str(s) for s in arg_sites))) mask.run(args) output = SeqIO.parse(out_file, "fasta") for record in output: reference = str(sequences[record.id].seq) masked_seq = str(record.seq) assert masked_seq[:from_beginning] == "N" * from_beginning assert masked_seq[-from_end:] == "N" * from_end for idx, site in enumerate(masked_seq[from_beginning:-from_end], from_beginning): if idx in expected_removals: assert site == "N" else: assert site == reference[idx] def test_e2e_fasta_mask_invalid(self, fasta_file, out_file, sequences, argparser): args = argparser("-s %s -o %s --mask-invalid" % (fasta_file, out_file)) mask.run(args) output = SeqIO.parse(out_file, "fasta") for record in output: reference = str(sequences[record.id].seq) for idx, site in enumerate(reference): assert record.seq[idx] == site if site in VALID_NUCLEOTIDES else "N" def test_e2e_vcf_minimal(self, vcf_file, bed_file, argparser): args = argparser("-s %s --mask %s" % (vcf_file, bed_file)) mask.run(args) with open(vcf_file) as output: assert output.readline().startswith("##fileformat") # is a VCF assert output.readline().startswith("#CHROM\tPOS\t") # have a header for line in output.readlines(): site = int(line.split("\t")[1]) # POS column site = site - 1 # shift to zero-indexed site assert site not in TEST_BED_SEQUENCE def test_e2e_vcf_mask_file(self, vcf_file, mask_file, argparser): args = argparser("-s %s --mask %s" % (vcf_file, mask_file)) mask.run(args) with open(vcf_file) as output: assert output.readline().startswith("##fileformat") # is a VCF assert output.readline().startswith("#CHROM\tPOS\t") # have a header for line in output.readlines(): site = int(line.split("\t")[1]) # POS column site = site - 1 # shift to zero-indexed site assert site not in TEST_MASK_SEQUENCE def test_e2e_vcf_with_options(self, vcf_file, bed_file, out_file, argparser): arg_sites = [5, 12, 14] expected_removals = sorted(set(TEST_BED_SEQUENCE + [s - 1 for s in arg_sites])) args = argparser("-s %s -o %s --mask %s --mask-sites %s" % ( vcf_file, out_file, bed_file, " ".join(str(s) for s in arg_sites))) mask.run(args) with open(out_file) as output: assert output.readline().startswith("##fileformat") # is a VCF assert output.readline().startswith("#CHROM\tPOS\t") # have a header for line in output.readlines(): site = int(line.split("\t")[1]) # POS column site = site - 1 #re-zero-index the VCF sites assert site not in expected_removals augur-24.2.2/tests/test_mypy.py000066400000000000000000000004441456376326500165200ustar00rootroot00000000000000from pathlib import Path from subprocess import run topdir = Path(__file__).resolve().parent.parent def test_mypy(): # Check the exit status ourselves for nicer test output on failure result = run(["mypy"], cwd = topdir) assert result.returncode == 0, "mypy exited with errors" augur-24.2.2/tests/test_parse.py000066400000000000000000000061661456376326500166430ustar00rootroot00000000000000import Bio.SeqIO import Bio.Seq from pathlib import Path import sys # make sure we get the local version of parse sys.path.insert(0, (str(Path(__file__).parent.parent.parent))) from augur import parse class TestParse: def test_fix_dates(self, capsys): full_date = "4-5-2020" assert parse.fix_dates(full_date) == "2020-05-04" assert parse.fix_dates(full_date, dayfirst=False) == "2020-04-05" partial_date_no_month = "2020-04" assert parse.fix_dates(partial_date_no_month) == "2020-04-XX" assert parse.fix_dates(partial_date_no_month, dayfirst=False) == "2020-04-XX" partial_date_only_year = "2020" assert parse.fix_dates(partial_date_only_year) == "2020-XX-XX" # We should allow valid ambiguous dates to pass through the function # without a warning to the user. valid_ambiguous_date = "2020-XX-XX" assert parse.fix_dates(valid_ambiguous_date) == valid_ambiguous_date assert "WARNING" not in capsys.readouterr().err # We should warn the user when their dates cannot be parsed by pandas or # as a valid ambiguous date. malformed_date = "Aaasd123AS" assert(parse.fix_dates(malformed_date)) == malformed_date assert "WARNING" in capsys.readouterr().err def test_prettify(self): # test trim trim_string = "trim_here" assert parse.prettify(trim_string, trim=4) == trim_string[:4] + "..." trim_string_short = "trim" assert parse.prettify(trim_string_short, trim=4) == trim_string_short # test caps caps_string_pos = "usa" caps_string_neg = "usad" assert parse.prettify(caps_string_pos) == caps_string_pos.upper() assert parse.prettify(caps_string_neg) == caps_string_neg # test camelCase camel_case_string = "testing_one_two_three" assert parse.prettify(camel_case_string, camelCase=True) == "Testing One Two Three" # test remove comma remove_comma_string = "remove,the,commas" parse.prettify(remove_comma_string, removeComma=True) assert parse.prettify(remove_comma_string, removeComma=True) == "removethecommas" # test etal etal_lower_string = "testing string Et Al Et al" etal_strip_string = "nextstrain et al. et al Et Al." assert parse.prettify(etal_lower_string, etal='lower') == etal_lower_string.lower() assert parse.prettify(etal_strip_string, etal='strip') == "nextstrain " def test_parse_sequence(self): sequence_record = Bio.SeqRecord.SeqRecord( seq=Bio.Seq.Seq("ATCG"), id="sequence_A", description="sequence_A|USA|2020-10-03|north_america" ) fields = ["strain", "country", "date", "region"] sequence, metadata = parse.parse_sequence( sequence_record, fields=fields, strain_key="strain", prettify_fields=["region"] ) assert sequence.id == metadata["strain"] assert sequence.id == "sequence_A" assert set(fields) == set(metadata.keys()) assert metadata["region"] == "North America" augur-24.2.2/tests/test_schemas.py000066400000000000000000000007041456376326500171440ustar00rootroot00000000000000import json import jsonschema.validators import pytest from pathlib import Path schemas = list(Path("augur/data/").glob("schema-*.json")) @pytest.mark.parametrize("schema_path", schemas, ids = lambda schema_path: str(schema_path)) def test_schema_is_valid(schema_path): with schema_path.open("rb") as schema_fh: schema = json.load(schema_fh) Validator = jsonschema.validators.validator_for(schema) Validator.check_schema(schema) augur-24.2.2/tests/test_titer_models.py000066400000000000000000000005011456376326500202060ustar00rootroot00000000000000 from augur.titer_model import TiterCollection def test_titer_collection(): # Confirm that titers load from a file path. titers = TiterCollection("tests/data/titer_model/h3n2_titers_subset.tsv") # Confirm that all distinct test and reference strains have been counted. assert len(titers.strains) == 13 augur-24.2.2/tests/test_translate.py000066400000000000000000000040561456376326500175220ustar00rootroot00000000000000""" Unit tests for nucleotide to acid translation """ from pathlib import Path import sys from Bio.Seq import Seq from Bio.SeqFeature import SeqFeature, FeatureLocation # we assume (and assert) that this script is running from the tests/ directory sys.path.append(str(Path(__file__).parent.parent.parent)) from augur import translate class TestTranslate: def test_safe_translate(self): ''' Test safe_translate from a given nucleotide sequence with no gaps to amino acid, accounting for reporting_exceptions ''' # initialize input and output tuples (tuple of params, expected outputs) params_and_outs = [(('ATG',), 'M'), (('ATGGT-',), 'MX'), (('ATG---',), 'M-'), (('ATGTAG',), 'M*'), (('',), ''), (('ATGT',), 'MX'), (('ATG', True), ('M', False)), (('ATGA-G', True), ('MX', True))] # input each pair into the function and check for pair in params_and_outs: params, out = pair assert translate.safe_translate(*params) == out def test_translate_feature(self): ''' Test translate_feature from a dictionary of given nucleotides to dictionary of translated amino acids ''' # Seq -> Amino https://en.wikipedia.org/wiki/DNA_codon_table seq1 = Seq("TTTCTTATGGTCGTA") seq2 = Seq("TCTTCAACTGCTACA") seq3 = Seq("CATAATGAATATAAT") aln = {'seq1': seq1, 'seq2': seq2, 'seq3': seq3} feature = SeqFeature(FeatureLocation(0, 15), type="domain") # expected results expected_translations = {'seq1': 'FLMVV', 'seq2': 'SSTAT', 'seq3': 'HNEYN'} assert translate.translate_feature(aln, feature) == expected_translations # TODO: test_vcf_feature, assign_aa_vcf, assign_aa_fasta # Unclear how to emulate inputs (TreeTime dict, tree) augur-24.2.2/tests/test_utils.py000066400000000000000000000100061456376326500166550ustar00rootroot00000000000000import json import numpy as np from pathlib import Path from unittest.mock import patch import pandas as pd import pytest from augur import utils class TestUtils: @pytest.mark.parametrize("extension", ["bed","BED"]) @patch('augur.utils.read_bed_file') def test_load_mask_sites_recognizes_bed_file(self, m_read_bed_file, extension): """load_mask_sites should handle files that end with .bed with any capitalization as a bed""" m_read_bed_file.return_value = [3,4] assert utils.load_mask_sites("mask.%s" % extension) == [3,4] m_read_bed_file.assert_called_with("mask.%s" % extension) @patch('augur.utils.read_mask_file') def test_load_mask_sites_recognizes_non_bed_file(self, m_read_mask_file): """load_mask_sites should pass any other files to read_mask_file""" m_read_mask_file.return_value = [5,6] assert utils.load_mask_sites("mask.not_a_bed") m_read_mask_file.assert_called_with("mask.not_a_bed") def test_read_mask_file_good_input(self, tmpdir): """read_mask_file should return a sorted list of unique sites from good mask files""" mask_sites = [15,200,34,200,36] expected_sites = sorted(set(i - 1 for i in mask_sites)) mask_file = str(tmpdir / "temp.mask") with open(mask_file, "w") as fh: fh.write("\n".join(str(i) for i in mask_sites)) assert utils.read_mask_file(mask_file) == expected_sites def test_read_mask_file_bad_lines(self, tmpdir): """read_mask_file should fail on bad lines in mask files""" mask_file = str(tmpdir / "temp.mask") bad_mask_sites = ["1", "#comment", "2"] with open(mask_file, "w") as fh: fh.write("\n".join(bad_mask_sites)) with pytest.raises(ValueError): utils.read_mask_file(mask_file) def test_read_bed_file_good_input(self, tmpdir): """read_bed_file should read site ranges from properly formatted bed files""" bed_file = str(tmpdir / "temp.bed") bed_lines = ["SEQ\t7\t8", "SEQ\t2\t6", "SEQ\t3\t4"] expected_sites = [2,3,4,5,7] with open(bed_file, "w") as fh: fh.write("\n".join(bed_lines)) assert utils.read_bed_file(bed_file) == expected_sites def test_read_bed_file_with_header(self, tmpdir): """read_bed_file should skip header lines if they exist in bed files""" bed_file = str(tmpdir / "temp.bed") bed_lines = ["CHROM\tSTART\tEND","SEQ\t7\t8", "SEQ\t2\t5"] expected_sites = [2,3,4,7] with open(bed_file, "w") as fh: fh.write("\n".join(bed_lines)) assert utils.read_bed_file(bed_file) == expected_sites def test_read_bed_file_with_bad_lines(self, tmpdir): """read_bed_file should error out if any other lines are unreadable""" bed_file = str(tmpdir / "temp.bed") bed_lines = ["SEQ\t7\t8", "CHROM\tSTART\tEND", "SEQ\t2\t5"] with open(bed_file, "w") as fh: fh.write("\n".join(bed_lines)) with pytest.raises(Exception): utils.read_bed_file(bed_file) def test_read_mask_file_drm_file(self, tmpdir): """read_mask_file should handle drm files as well""" drm_file = str(tmpdir / "temp.drm") drm_lines = ["SEQ\t5", "SEQ\t7"] expected_sites = [4,6] with open(drm_file, "w") as fh: fh.write("\n".join(drm_lines)) assert utils.read_mask_file(drm_file) == expected_sites def test_write_json_data_types(self, tmpdir): """write_json should be able to serialize various data types.""" data = { 'int': np.int64(1), 'float': np.float64(2.0), 'array': np.array([3,4,5]), 'series': pd.Series([6,7,8]) } file = Path(tmpdir) / Path("data.json") utils.write_json(data, file, include_version=False) with open(file) as f: assert json.load(f) == { 'int': 1, 'float': 2.0, 'array': [3,4,5], 'series': [6,7,8] } augur-24.2.2/tests/test_validate.py000066400000000000000000000170241456376326500173150ustar00rootroot00000000000000import pytest import random from augur.validate import ( validate_collection_config_fields, validate_collection_display_defaults, validate_measurements_config, load_json_schema, validate_json, ValidateError ) @pytest.fixture def example_collection_measurements(): return [ {"strain": "strain_1", "value": 0, "valid_field_1": "value_1a", "valid_field_2": "value_2a", "valid_field_3": "value_3a"}, {"strain": "strain_2", "value": 0, "valid_field_1": "value_1b", "valid_field_2": "value_2b", "valid_field_3": "value_3b"}, {"strain": "strain_3", "value": 0, "valid_field_1": "value_1c", "valid_field_2": "value_2c", "valid_field_3": "value_3c"} ] @pytest.fixture def example_collection(example_collection_measurements): return { "key": "collection_0", "fields": [ {"key": "valid_field_1"}, {"key": "valid_field_2"}, {"key": "valid_field_3"} ], "groupings": [ {"key": "valid_field_1"}, {"key": "valid_field_2"}, {"key": "valid_field_3"} ], "filters": ["valid_field_1", "valid_field_2", "valid_field_3"], "display_defaults": { "group_by": "valid_field_1" }, "measurements": example_collection_measurements } @pytest.fixture def example_measurements(example_collection): number_of_collections = 10 return { "default_collection": f"collection_{random.randint(0, number_of_collections - 1)}", "collections": [{**example_collection, "key": f"collection_{x}"} for x in range(number_of_collections)] } class TestValidateMeasurements(): def test_validate_collection_config_fields_valid(self, example_collection): assert validate_collection_config_fields(example_collection) @pytest.mark.parametrize( "invalid_config", [ {"fields": [{"key": "invalid_field"}]}, {"groupings": [{"key": "invalid_field"}]}, {"filters": ["invalid_field"]} ] ) def test_validate_collection_config_fields_invalid(self, invalid_config, example_collection_measurements, capsys): collection = {**invalid_config, "measurements": example_collection_measurements} assert not validate_collection_config_fields(collection) assert capsys.readouterr().err == f"ERROR: Collection includes {next(iter(invalid_config))} that do not exist as fields in measurements: {{'invalid_field'}}.\n" def test_validate_collection_display_defaults_valid(self, example_collection): assert validate_collection_display_defaults(example_collection) def test_validate_collection_display_defaults_invalid(self, example_collection, capsys): collection = {**example_collection} collection["display_defaults"]["group_by"] = "invalid_field" assert not validate_collection_display_defaults(collection) assert capsys.readouterr().err == "ERROR: Collection has a default group-by field 'invalid_field' that is not included in the groupings' fields.\n" def test_validate_measurements_config_valid(self, example_measurements): assert validate_measurements_config(example_measurements) def test_validate_measurements_config_duplicate_collection_keys(self, example_collection, capsys): measurements = { "collections": [example_collection] * 2 } assert not validate_measurements_config(measurements) assert capsys.readouterr().err == "ERROR: Collections at indexes [0, 1] share the same collection key 'collection_0'.\n" def test_validate_measurements_config_invalid_default_collection(self, example_measurements, capsys): measurements = { **example_measurements, "default_collection": "invalid_collection" } assert not validate_measurements_config(measurements) assert capsys.readouterr().err == "ERROR: The default collection key 'invalid_collection' does not match any of the collections' keys.\n" @pytest.fixture def genome_annotation_schema(): return load_json_schema("schema-annotations.json") class TestValidateGenomeAnnotations(): def test_negative_strand_nuc(self, capsys, genome_annotation_schema): d = {"nuc": {"start": 1, "end": 200, "strand": "-"}} with pytest.raises(ValidateError): validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printing def test_nuc_not_starting_at_one(self, capsys, genome_annotation_schema): d = {"nuc": {"start": 100, "end": 200, "strand": "+"}} with pytest.raises(ValidateError): validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printing def test_missing_nuc(self, capsys, genome_annotation_schema): d = {"cds": {"start": 100, "end": 200, "strand": "+"}} with pytest.raises(ValidateError): validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printing def test_missing_properties(self, capsys, genome_annotation_schema): d = {"nuc": {"start": 1, "end": 100}, "cds": {"start": 20, "strand": "+"}} with pytest.raises(ValidateError): validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printing def test_not_stranded_cds(self, capsys, genome_annotation_schema): # Strand . is for features that are not stranded (as per GFF spec), and thus they're not CDSs d = {"nuc": {"start": 1, "end": 100}, "cds": {"start": 18, "end": 20, "strand": "."}} with pytest.raises(ValidateError): validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printing def test_negative_coordinates(self, capsys, genome_annotation_schema): d = {"nuc": {"start": 1, "end": 100}, "cds": {"start": -2, "end": 10, "strand": "+"}} with pytest.raises(ValidateError): validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printing def test_valid_genome(self, capsys, genome_annotation_schema): d = {"nuc": {"start": 1, "end": 100}, "cds": {"start": 20, "end": 28, "strand": "+"}} validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printing def test_valid_segmented_genome(self, capsys, genome_annotation_schema): d = {"nuc": {"start": 1, "end": 100}, "cds": {"segments": [{"start": 20, "end": 28}], "strand": "+"}} validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printing def test_invalid_segmented_genome(self, capsys, genome_annotation_schema): d = {"nuc": {"start": 1, "end": 100}, "cds": {"segments": [{"start": 20, "end": 28}, {"start": 27}], "strand": "+"}} with pytest.raises(ValidateError): validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printing def test_string_coordinates(self, capsys, genome_annotation_schema): d = {"nuc": {"start": 1, "end": 100}, "cds": {"segments": [{"start": 20, "end": 28}, {"start": "27", "end": "29"}], "strand": "+"}} with pytest.raises(ValidateError): validate_json(d, genome_annotation_schema, "") capsys.readouterr() # suppress validation error printingaugur-24.2.2/tests/test_validate_export.py000066400000000000000000000023001456376326500207050ustar00rootroot00000000000000import Bio.Phylo from io import StringIO from pathlib import Path import pytest import sys # we assume (and assert) that this script is running from the tests/ directory sys.path.append(str(Path(__file__).parent.parent.parent)) from augur.export_v2 import convert_tree_to_json_structure from augur.validate import ValidateError from augur.validate_export import ensure_no_duplicate_names class TestValidateExport(): def test_export_without_duplicate_names(self): # Create a tree with unique tip names. tree = Bio.Phylo.read(StringIO("root(A, internal(B, C))"), "newick") metadata = {"A": {}, "B": {}, "C": {}, "root": {}, "internal": {}} root = convert_tree_to_json_structure(tree.root, metadata, None) ensure_no_duplicate_names(root, ValidateError) def test_export_with_duplicate_names(self): # Create a tree with duplicate tip names. tree = Bio.Phylo.read(StringIO("root(A, internal(B, B))"), "newick") metadata = {"A": {}, "B": {}, "root": {}, "internal": {}} root = convert_tree_to_json_structure(tree.root, metadata, None) with pytest.raises(ValidateError): ensure_no_duplicate_names(root, ValidateError) augur-24.2.2/tests/util_support/000077500000000000000000000000001456376326500166605ustar00rootroot00000000000000augur-24.2.2/tests/util_support/test_color_parser.py000066400000000000000000000040031456376326500227600ustar00rootroot00000000000000from augur.util_support.color_parser import ColorParser import pytest @pytest.fixture() def prepare_file(tmpdir): def _prepare_file(contents): with open(f"{tmpdir}/colors.tsv", "w") as file: for line in contents.split("\n"): file.write(line.strip() + "\n") return _prepare_file class TestColorParser: def test_color_file_not_found(self): with pytest.raises(FileNotFoundError): ColorParser(mapping_filename="/does/not/exist.txt").mapping def test_color_file_no_defaults(self, tmpdir, prepare_file): prepare_file( """ strain\tstrainA\t#ff0000 strain\tstrainB\t#00ff00 strain\tstrainC\t#0000ff """ ) assert ColorParser( mapping_filename=f"{tmpdir}/colors.tsv", use_defaults=False ).mapping == { "strain": [ ("straina", "#ff0000"), ("strainb", "#00ff00"), ("strainc", "#0000ff"), ] } def test_color_file_with_defaults(self, tmpdir, prepare_file): prepare_file( """ strain\tstrainA\t#ff0000 strain\tstrainB\t#00ff00 strain\tstrainC\t#0000ff """ ) mapping = ColorParser(mapping_filename=f"{tmpdir}/colors.tsv").mapping assert ("africa", "#CEB541") in mapping["region"] assert ("north america", "#DC2F24") in mapping["region"] assert mapping["strain"] == [ ("straina", "#ff0000"), ("strainb", "#00ff00"), ("strainc", "#0000ff"), ] def test_color_file_bad_entries(self, tmpdir, prepare_file): prepare_file( """ strain\tstrainA\t#ff0000 strain\tstrainB\t#00ff00000000 strain strainC\t#0000ff """ ) assert ColorParser( mapping_filename=f"{tmpdir}/colors.tsv", use_defaults=False ).mapping == {"strain": [("straina", "#ff0000")]} augur-24.2.2/tests/util_support/test_node_data.py000066400000000000000000000021431456376326500222070ustar00rootroot00000000000000from augur.util_support.node_data import DuplicatedNonDictAttributeError from augur.util_support.node_data import NodeData import pytest class TestNodeData: def test_update(self): node_data = NodeData() node_data.update({"a": 5, "b": {"c": 6}}) assert node_data.attrs == {"a": 5, "b": {"c": 6}} node_data.update({"a": 7}) assert node_data.attrs == {"a": 7, "b": {"c": 6}} node_data.update({"b": {"d": 8}}) assert node_data.attrs == {"a": 7, "b": {"c": 6, "d": 8}} node_data.update({"b": {"d": 9}}) assert node_data.attrs == {"a": 7, "b": {"c": 6, "d": 9}} def test_update_merge_nondict_into_dict(self): node_data = NodeData() node_data.update({"a": 5, "b": {"c": 6}}) with pytest.raises(DuplicatedNonDictAttributeError): node_data.update({"b": "a string!"}) def test_update_merge_dict_into_nondict(self): node_data = NodeData() node_data.update({"a": 5, "b": {"c": 6}}) with pytest.raises(DuplicatedNonDictAttributeError): node_data.update({"a": {"g": 2}}) augur-24.2.2/tests/util_support/test_node_data_file.py000066400000000000000000000044631456376326500232150ustar00rootroot00000000000000import json from augur.__version__ import __version__ from augur.errors import AugurError from augur.util_support.node_data_file import NodeDataFile import pytest @pytest.fixture() def build_node_data_file(tmpdir): def _build_node_data_file(contents): with open(f"{tmpdir}/node.json", "w") as file: file.write(contents) return NodeDataFile(f"{tmpdir}/node.json") return _build_node_data_file class TestNodeDataFile: def test_items(self, build_node_data_file): node_data_file = build_node_data_file( """ { "generated_by": "some app", "nodes": { "a": 5 } } """ ) items = node_data_file.items() assert len(items) == 1 assert "generated_by" not in items def test_validate_valid(self, build_node_data_file): # Implied assertion that no exceptions are raised build_node_data_file( f""" {{ "annotations": {{ "nuc": {{ "start": 1, "end": 100 }} }}, "generated_by": {{ "program": "augur", "version": "{__version__}" }}, "nodes": {{ "a": 5 }} }} """ ) def test_validate_invalid_annotation(self, build_node_data_file): with pytest.raises(AugurError, match="annotations.*invalid JSON format"): build_node_data_file( """ { "annotations": "hhhhh", "nodes": { "a": 5 } } """ ) def test_validate_nodes_not_dict(self, build_node_data_file): with pytest.raises(AugurError, match="is not a dictionary"): build_node_data_file('{ "nodes": "hhh" }') def test_validate_incompatible_augur_version(self, build_node_data_file): with pytest.raises(AugurError, match="incompatibility detected"): build_node_data_file( """ { "generated_by": { "program": "augur", "version": "0.1" }, "nodes": { "a": 5 } } """ ) def test_validate_malformed_json(self, build_node_data_file): with pytest.raises(json.decoder.JSONDecodeError): build_node_data_file("hhhhhhhhhh") augur-24.2.2/tests/util_support/test_node_data_reader.py000066400000000000000000000063651456376326500235430ustar00rootroot00000000000000from augur.util_support.node_data_reader import NodeDataReader import pytest @pytest.fixture() def prepare_file(tmpdir): def _prepare_file(name, contents): with open(f"{tmpdir}/{name}", "w") as file: file.write(contents) return _prepare_file class TestNodeDataFile: def test_read(self, tmpdir, prepare_file): prepare_file( "file1.json", """ { "a": 5, "nodes": { "NODE_1": { "x": 5 }, "NODE_2": { "x": 6 }, "NODE_3": { "x": 7 } } } """, ) prepare_file( "file2.json", """ { "nodes": { "NODE_3": { "y": 8 }, "NODE_4": { "x": 9 } } } """, ) node_data = NodeDataReader( [f"{tmpdir}/file1.json", f"{tmpdir}/file2.json"] ).read() assert node_data == { "a": 5, "nodes": { "NODE_1": {"x": 5}, "NODE_2": {"x": 6}, "NODE_3": {"x": 7, "y": 8}, "NODE_4": {"x": 9}, }, } def test_read_bad_file(self): NodeDataReader(["/does/not/exist.json"]) def test_read_dict_nonuniformity(self, tmpdir, prepare_file): prepare_file( "file1.json", """ { "nodes": {"node_name": "some_value"}, "a": {} } """, ) prepare_file( "file2.json", """ { "nodes": {"node_name": "some_other_value"}, "a": "nah" } """, ) with pytest.raises(SystemExit): NodeDataReader([f"{tmpdir}/file1.json", f"{tmpdir}/file2.json"]).read() def test_read_check_against_tree(self, tmpdir, prepare_file): prepare_file( "file1.json", """ { "a": 5, "nodes": { "NODE_1": { "x": 5 }, "NODE_2": { "x": 6 }, "NODE_3": { "x": 7 } } } """, ) prepare_file("tree.newick", "(NODE_1, NODE_2) NODE_3") NodeDataReader([f"{tmpdir}/file1.json"], f"{tmpdir}/tree.newick").read() def test_read_check_against_tree_bad(self, tmpdir, prepare_file): prepare_file( "file1.json", """ { "a": 5, "nodes": { "NODE_1": { "x": 5 }, "NODE_2": { "x": 6 }, "NODE_3": { "x": 7 } } } """, ) prepare_file("tree.newick", "Noooooooooope") with pytest.raises(SystemExit): NodeDataReader([f"{tmpdir}/file1.json"], f"{tmpdir}/tree.newick").read() def test_read_check_against_missing_tree(self, tmpdir): with pytest.raises(SystemExit): node_names_from_tree = NodeDataReader( [f"{tmpdir}/file1.json"], f"{tmpdir}/missing_file.txt" ).node_names_from_tree_file